Database: Hu_VH_DNA_edit.txt; Hu_VD_DNA_edit.txt; Hu_VJ_DNA_edit.txt
           458 sequences; 118,432 total letters



Query= Query_201030

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           311     4e-87
IGHD6-19*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCAAC	GGGTATAGAAGTGGC	AGATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAACGGGTATAGAAGTGGCAGATAACTACTACTATGGTTTGGACGTC	AATGIEVADNYYYGLDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  H  G  M  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_1      1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAGTCATGGCATGCAGTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.6% (222/245)  IGHV3-30*03  47   ...........................................T..CT..........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  F  N  G  S  H  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  G  N  S  
                    Query_1      91   AATGGTTGGCAGTTATCTCATTTAATGGAAGTCATACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGGCAATTCCA  180
V  90.6% (222/245)  IGHV3-30*03  137  .G...G..........A....A.G........A...A...........................A......A.........A........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  A  L  Y  L  Q  M  A  S  L  R  S  A  D  T  A  V  Y  F  C  A  A  T  G  I  E  V  A  D  
                    Query_1      181  AGAACGCACTGTATCTGCAAATGGCCAGCCTGAGATCTGCGGACACGGCTGTTTACTTCTGTGCGGCAACGGGTATAGAAGTGGCAGATA  270
V  90.6% (222/245)  IGHV3-30*03  227  .....A.G...............AA..........G...A............G..T.A.......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.3% (14/15)    IGHD6-19*01  1    ----------------------------------------------------------------------........C......-----  15

                                      GT-------------------->                                 
                                      N  Y  Y  Y  G  L  D  V  W  G  H  G  T  T  V  T  V  S  S 
                    Query_1      271  ACTACTACTATGGTTTGGACGTCTGGGGCCACGGGACCACGGTCACCGTCTCCTCA  326
J  94.6% (53/56)    IGHJ6*02     7    ..........C...A................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_323858

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           403     1e-114
IGHD1-1*01                                                                                            10.3    134   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAACG	GGCAGCCCCATATCGCGGC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACGGGCAGCCCCATATCGCGGCTTGGCTAT	ARGTGSPISRLGY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  A  G  Y
                    Query_2      1    GCAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCGCCGGCTA  90
V  94.5% (274/290)  IGHV1-46*01  6    ..................G.C.............................................................A..A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  A  G  S  T  N  Y  A  Q
                    Query_2      91   CTATATACACTGGGTACGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGCTGGTAGCACAAATTACGCACA  180
V  94.5% (274/290)  IGHV1-46*01  96   ......G........G....................................................G...........GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  F  L  D  L  S  S  L  K  S  E  D  T  A
                    Query_2      181  GAAATTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGTACAGTCTTCTTGGACCTGAGCAGCCTTAAATCTGAGGACACGGC  270
V  94.5% (274/290)  IGHV1-46*01  186  ...G.........................................C.......A.A....G...........G.G...............  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  G  T  G  S  P  I  S  R  L  G  Y  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_2      271  CGTGTATTACTGTGCGAGAGGAACGGGCAGCCCCATATCGCGGCTTGGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  356
V  94.5% (274/290)  IGHV1-46*01  276  ....................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (5/5)     IGHD1-1*01   11   --------------------.....-------------------------------------------------------------  15
J  92.9% (39/42)    IGHJ4*02     7    --------------------------------------------...A...C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_251218

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD1-1*01                                                                                            14.1    7.9  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_3      1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_3      91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_3      181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_3      271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_251217

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           402     3e-114
IGHD3-3*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GG	TTACGATTTTTGGAGTGGTT	TCAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTTACGATTTTTGGAGTGGTTTCAGACTTTGACTAC	ARVTIFGVVSDFDY	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	293	275	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T 
                    Query_4      1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTACC  90
V  93.9% (275/293)  IGHV1-18*04  1    ...G.T............................................................................C.......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       Y  H  G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  T  D  G  N  T  H  Y 
                    Query_4      91   TACCACGGTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTACCGATGGGAACACACACTAT  180
V  93.9% (275/293)  IGHV1-18*04  91   AG.T.........G.......................................................TA.A....T......A.....  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  H  N  V  Q  G  R  V  T  L  T  T  D  S  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_4      181  GCACACAACGTCCAGGGCAGAGTCACCTTGACCACAGACTCATCCACGAGCACCGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  270
V  93.9% (275/293)  IGHV1-18*04  181  .....G..GC.................A...........A.............A....................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  V  T  I  F  G  V  V  S  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_4      271  ACGGCCGTGTATTACTGTGCGAGGGTTACGATTTTTGGAGTGGTTTCAGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  360
V  93.9% (275/293)  IGHV1-18*04  271  .......................-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (20/20)   IGHD3-3*01   4    -------------------------....................---------------------------------------------  23
J  100.0% (45/45)   IGHJ4*02     4    -------------------------------------------------.........................................  44

                                          
                                       S  
                    Query_4      361  TCAG  364
J  100.0% (45/45)   IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_327540

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           385     4e-109
IGHD1-26*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGG	ATAGTGGGAGCT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGGATAGTGGGAGCTACTACTTTGACTAC	ARDLDSGSYYFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	248	2	0	99.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5      1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.2% (248/250)  IGHV3-48*03  47   ......................A...................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  I  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5      91   AGTGGGTTTCATACATTAGTAGTAGTGGTAGTATCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  99.2% (248/250)  IGHV3-48*03  137  .................................C........................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  D  S  G  S  Y  
                    Query_5      181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATCTGGATAGTGGGAGCTACT  270
V  99.2% (248/250)  IGHV3-48*03  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD1-26*01  4    ---------------------------------------------------------------------------............---  15
J  100.0% (48/48)   IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5      271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_251215

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           297     7e-83
IGHD3-9*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGACCCA	TACGGTATTTTG	GCTATTGAGAAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGTGACCCATACGGTATTTTGGCTATTGAGAAG	ATGDPYGILAIEK	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	42	9	0	82.4
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  N  Y  W  S  W  I  R  Q  S  P  A  K  G 
                    Query_6      1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGCCAACTACTGGAGTTGGATCCGCCAATCCCCTGCAAAGGGC  90
V  88.0% (220/250)  IGHV4-31*03  49   .................................................GTT..........C...........GCA...A.GG......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  T  T  E  Y  N  P  S  L  K  S  R  L  T  M  S  I  D  P  S 
                    Query_6      91   CTCGAGTGGATTGGATACATCTATTATGGTGGGACCACCGAGTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCCATTGACCCGTCT  180
V  88.0% (220/250)  IGHV4-31*03  139  ..G...........G...........CA......G....T.C...........C............G.T.....A..AG.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       T  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  D  P  Y  G  I  L 
                    Query_6      181  ACGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGTGACCCATACGGTATTTTG  270
V  88.0% (220/250)  IGHV4-31*03  229  .A...................C...G...........................G.............G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD3-9*01   5    ------------------------------------------------------------------------------....A.......  16

                                      ----------->                                
                                       A  I  E  K  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6      271  GCTATTGAGAAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
J  100.0% (32/32)   IGHJ4*02     15   ------------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_251212

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*04                                                                                           300     8e-84
IGHD2-21*01                                                                                           14.1    8.6  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*04	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	N/A	TGCTATT	TGGGGCGGCCAAGTTAAAAGGGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATGCTATTTGGGGCGGCCAAGTTAAAAGGGCCTACTTTGACTCC	ARDAIWGGQVKRAYFDS	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  V  T  F  S  D  D  G  M  N  W  L  R  Q  A  P  G  K  G  L  
                    Query_7      1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGAGTCACCTTTAGTGACGATGGCATGAACTGGCTCCGCCAGGCTCCAGGGAAGGGTCTGG  90
V  88.4% (221/250)  IGHV3-48*04  47   ....................G...........T.......C...AG.T..A...........G......................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  I  V  Y  Y  G  D  S  V  K  G  R  C  T  T  S  R  D  N  A  
                    Query_7      91   AGTGGGTTTCATATATTAGTAGTAGTGGCAGTATTGTATACTACGGAGACTCTGTGAAGGGCCGATGCACCACCTCCAGAGACAACGCCA  180
V  88.4% (221/250)  IGHV3-48*04  137  .............C............A.T....CCA.........C....................T.....T.................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  K  S  L  Y  L  E  I  N  S  L  R  V  D  D  T  A  V  Y  Y  C  A  R  D  A  I  W  G  G  Q  
                    Query_7      181  AGAAGTCTCTGTATCTGGAAATCAACAGTCTGCGAGTCGACGACACGGCTGTCTACTACTGTGCGAGGGATGCTATTTGGGGCGGCCAAG  270
V  88.4% (221/250)  IGHV3-48*04  227  ....C..A.........C....G.....C...A...C...G...........G..T...........A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-21*01  20   ----------------------------------------------------------------------.......-------------  26

                                      GT-------------------->                                  
                                      V  K  R  A  Y  F  D  S  W  G  P  G  T  R  V  T  V  S  S  
                    Query_7      271  TTAAAAGGGCCTACTTTGACTCCTGGGGCCCGGGGACCCGGGTCACCGTCTCCTCAG  327
J  91.5% (43/47)    IGHJ4*02     2    ----------...........A........A...A....T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_251213

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           425     3e-121
IGHD3-22*01                                                                                           23.8    0.012 
IGHJ3*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	281	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F
                    Query_8      1    GCAGCTGGTGCAGTCTGGAGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTT  90
V  96.9% (281/290)  IGHV3-33*01  6    ..........G.......G..................................................................AG..A  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D
                    Query_8      91   TGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGA  180
V  96.9% (281/290)  IGHV3-33*01  96   ..........................................................................................  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A
                    Query_8      181  CTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGC  270
V  96.9% (281/290)  IGHV3-33*01  186  .....................................T...........C.......................A................  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  T  T  G  R  D  P  F  D  I  W  G  Q  G  A  I  L  T
                    Query_8      271  TGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGGCAATACTCAC  360
V  96.9% (281/290)  IGHV3-33*01  276  ...G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  88.9% (16/18)    IGHD3-22*01  5    -------------------------------..........G..G....-----------------------------------------  22
J  92.0% (46/50)    IGHJ3*02     1    ---------------------------------------------------....G.......................A....GG....  39

                                                 
                                        V  S  S  
                    Query_8      361  CGTCTCTTCAG  371
J  92.0% (46/50)    IGHJ3*02     40   ...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_251210

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGCAGTTAC	CTTTAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGCAGTTACCTTTATTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_9      1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTACAAACTA  90
V  94.5% (275/291)  IGHV5-51*01  6    .................................................................G...........G......C.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  D  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_9      91   CTGGATCGACTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  94.5% (275/291)  IGHV5-51*01  96   ........G...................................................................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  L  E  G  Q  I  T  I  S  A  D  N  S  I  G  T  A  Y  L  Q  L  H  S  L  K  A  S  D  T  V
                    Query_9      181  GTCCCTCGAAGGCCAAATCACCATCTCAGCCGACAACTCCATCGGCACCGCCTACCTGCAGTTGCACAGCCTGAAGGCCTCGGACACCGT  270
V  94.5% (275/291)  IGHV5-51*01  186  ....T..C.......GG...................G......A..................G.AG.......................C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_9      271  CATGTATTACTGTGCGAGACATGGGGATGATAGTGGCAGTTACCTTTATTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  94.5% (275/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD1-26*01  4    -----------------------------.......G..C...-----------------------------------------------  17
J  98.1% (53/54)    IGHJ6*02     9    -------------------------------------------------....A....................................  49

                                                   
                                        T  V  S  S 
                    Query_9      361  CACCGTCTCCTCA  373
J  98.1% (53/54)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_251211

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           39.1    3e-07
IGHJ2*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTGCCCATGA	ATTACTATGATAGTAGTGGCTCTTAC	ATTGGGAGCGTTA	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTGCCCATGAATTACTATGATAGTAGTGGCTCTTACATTGGGAGCGTTAGGTACTTCGATTTC	ARDVPMNYYDSSGSYIGSVRYFDF	238	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_10     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTTTTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   ........................................G.....AC........C............C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  A  K  N 
                    Query_10     91   TGGATTGGCTATGTCTATTCCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGCCGAGTCACCTTATCAGTGGACACGGCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G...A......A....................................T.........A.......A......T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------------C
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  V  P  M  N  Y  Y  D  S 
                    Query_10     181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATGTGCCCATGAATTACTATGATAGT  270
V  94.3% (231/245)  IGHV4-59*01  229  .............A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.3% (24/26)    IGHD3-22*01  3    ----------------------------------------------------------------------------..............  16

                                      DR3-IMGT------------------------------>                                  
                                       S  G  S  Y  I  G  S  V  R  Y  F  D  F  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10     271  AGTGGCTCTTACATTGGGAGCGTTAGGTACTTCGATTTCTGGGGCCGTGGCACCCTGGTCACTGTCTCTTCAG  343
D  92.3% (24/26)    IGHD3-22*01  17   .....T.A....-------------------------------------------------------------  28
J  95.8% (46/48)    IGHJ2*01     6    -------------------------...........C...............................C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_332331

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGACAG	ATTGTCGTAGTCCCCGGTGCTA	C	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGACAGATTGTCGTAGTCCCCGGTGCTACCTACGGTATGGACGTC	ARDRQIVVVPGATYGMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  S  S  S  Y  F  W  T  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_11     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCAGCAGTAGTTACTTCTGGACTTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  90.6% (222/245)  IGHV4-59*01  49   .....................................T...........A.....GC.................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  D  G  S  G  S  P  R  Y  N  P  S  L  K  S  R  V  T  M  S  L  D  T  S  K  N 
                    Query_11     91   TGGATTGGCTATGTCGATGGCAGTGGGAGTCCCAGGTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCGCTAGACACGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  ........G...A..T..TA.........CA...AC................................A..AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       R  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  Q  I  V  V  V  P  G 
                    Query_11     181  CGATTCTCCCTGAGGCTGAATTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGACAGATTGTCGTAGTCCCCGGT  270
V  90.6% (222/245)  IGHV4-59*01  229  .AG..........A.....GC............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  81.8% (18/22)    IGHD2-2*01   6    ------------------------------------------------------------------------.....A.....A..A.C.  23

                                      -------------------->                                 
                                       A  T  Y  G  M  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_11     271  GCTACCTACGGTATGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  324
D  81.8% (18/22)    IGHD2-2*01   24   ....--------------------------------------------------  27
J  98.0% (48/49)    IGHJ6*02     14   -----...............................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_86207

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            322     2e-90
IGHD3-9*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAAGAGCGGTACGCATTGAT	ACTGTTTATTA	CGAGGGGCCTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAAGAGCGGTACGCATTGATACTGTTTATTACGAGGGGCCTCCTGACTAC	ATRAVRIDTVYYEGPPDY	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  N  S  N  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_12    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGTCCATCAGTAATAGTAACTGGTGGACTTGGATTCGCCAGCCCCCAGGAAAGGGGCTG  90
V  92.2% (225/244)  IGHV4-4*01  49   ................................C........C.G..............G....G.C..............G.........  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  I  D  S  G  S  T  N  Y  N  P  S  L  M  S  R  V  I  I  S  L  D  K  S  K 
                    Query_12    91   GAGTGGATTGGGGAAATTATTGATAGTGGGAGCACCAACTACAACCCGTCCCTCATGAGTCGAGTCATCATCTCACTAGACAAGTCCAAG  180
V  92.2% (225/244)  IGHV4-4*01  139  .................CTA.C.................................A...........C...A...G..............  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                      N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  T  R  A  V  R  I  D  T  V 
                    Query_12    181  AATCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGACAAGAGCGGTACGCATTGATACTGTT  270
V  92.2% (225/244)  IGHV4-4*01  229  ..C..............G....G................................G........--------------------------  292
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  90.9% (10/11)    IGHD3-9*01  17   ------------------------------------------------------------------------------------....G.  22

                                     GT--------------------->                                  
                                      Y  Y  E  G  P  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12    271  TATTACGAGGGGCCTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  90.9% (10/11)    IGHD3-9*01  23   .....-----------------------------------------------------  27
J  100.0% (41/41)   IGHJ4*02    8    -----------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_86204

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           400     9e-114
IGHD3-16*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	TATGTCACC	TGGGGG	TATTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGATATGTCACCTGGGGGTATTCTGACTAC	AGYVTWGYSDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	288	272	16	0	94.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y 
                    Query_13     2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTAT  91
V  94.4% (272/288)  IGHV1-18*01  7    ...................C.................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  T  Y  N  H  N  T  H  F  A  Q 
                    Query_13     92   GCCATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACTTACAATCATAACACACACTTTGCACAG  181
V  94.4% (272/288)  IGHV1-18*01  97   .GT....G..................................................G.G........GG.......A...A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_13     182  AAACTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGTACCGCCTACATGGAACTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.4% (272/288)  IGHV1-18*01  187  ..G.........................................C..A...........G..............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  G  Y  V  T  W  G  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13     272  GTGTATTACTGTGCGGGATATGTCACCTGGGGGTATTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  94.4% (272/288)  IGHV1-18*01  277  ...............A..-------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD3-16*01  17   ---------------------------......----------------------------------------------  22
J  100.0% (41/41)   IGHJ4*02     8    --------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_332332

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           347     7e-98
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-19*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTCAGATGGCGAGTTTGGCACG	GGCTGGTA	GGGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACTCAGATGGCGAGTTTGGCACGGGCTGGTAGGGGGGTTTTGACGGC	AKDSDGEFGTGW*GGFDG	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  I  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_14     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCATTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-48*03  47   ..........................................G...............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  G  S  G  T  I  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_14     91   AGTGGGTTTCATACATTAGTGGTAGTGGTACTATCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-48*03  137  ....................A.........G..C........................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  K  D  S  D  G  E  F  G  
                    Query_14     181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGAGACCTGAGGACACGGCCTTATATTACTGTGCAAAAGACTCAGATGGCGAGTTTGGCA  270
V  94.4% (236/250)  IGHV3-48*03  227  .......A..G.................C......G.C...........TG.T...........G.G...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      IMGT--------------------->                                  
                                      T  G  W  *  G  G  F  D  G  W  G  Q  G  S  L  V  T  V  S  P  
                    Query_14     271  CGGGCTGGTAGGGGGGTTTTGACGGCTGGGGCCAGGGATCCCTGGTCACCGTCTCCCCAG  330
D  100.0% (8/8)     IGHD6-19*01  13   --........--------------------------------------------------  20
J  90.7% (39/43)    IGHJ4*02     6    -----------------......TA.............A.................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_86202

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           280     1e-77
IGHD3-9*01                                                                                            27.6    7e-04
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGGGGGGC	TGACTGGTTATTAT	CGAACGGGGACTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGGGGGGCTGACTGGTTATTATCGAACGGGGACTTT	AKDRGADWLLSNGDF	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	19	5	0	79.2
FR2-IMGT	51	101	51	43	8	0	84.3
CDR2-IMGT	102	125	24	20	4	0	83.3
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	233	206	27	0	88.4


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  I  F  Y  N  Y  G  F  L  W  V  R  Q  T  A  G  K  G  L  E  W  V  A  T  I 
                    Query_15     15   TGTGCAGCCTCTGGATTCATTTTCTATAACTATGGCTTCCTCTGGGTCCGCCAGACTGCAGGCAAGGGGCTGGAGTGGGTGGCAACGATA  104
V  88.4% (206/233)  IGHV3-30*18  64   ...................CC...AG..G.......A.G.A.............G..C..........................GTT...  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  H  D  A  N  N  E  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  Q  N  T  V  Y  L 
                    Query_15     105  TCACATGATGCAAATAATGAATATTATGCAGACTCAGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCCAGAACACGGTGTATCTG  194
V  88.4% (206/233)  IGHV3-30*18  154  ...T......G..G....A....C...........C....A...............................A........C........  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------CDR3-IMGT----------------->
                                       Q  M  D  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  R  G  A  D  W  L  L  S  N  G  D  F 
                    Query_15     195  CAAATGGACAGCCTGAGACCTGAAGACACGGCTGTCTACTACTGTGCGAAAGATCGGGGGGCTGACTGGTTATTATCGAACGGGGACTTT  284
V  88.4% (206/233)  IGHV3-30*18  244  ......A...........G....G...........G..T..............-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (14/14)   IGHD3-9*01   15   --------------------------------------------------------------..............--------------  28

                                                                      
                                       W  G  Q  G  T  L  V  T  V  S  S
                    Query_15     285  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  316
J  100.0% (32/32)   IGHJ4*02     15   ................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_86203

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           302     3e-84
IGHD3-10*01                                                                                           12.2    32   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATTACATAGAGAAGGCTACAATAGA	GGAGTT	N/A	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATTACATAGAGAAGGCTACAATAGAGGAGTTTTTGCCTAT	ARELHREGYNRGVFAY	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	220	27	0	89.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  N  V  R  S  N  Y  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_16     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGGTCAACGTCAGGAGCAACTACATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGC  90
V  89.1% (220/247)  IGHV3-53*01  47   ................................T...C......T............AG...........................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      L  W  V  A  V  I  H  S  G  G  T  T  S  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  K  S  K  
                    Query_16     91   TGTGGGTCGCAGTTATTCACAGCGGTGGGACGACATCCTATTCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAAGTCCAAAA  180
V  89.1% (220/247)  IGHV3-53*01  137  A.......T........T.T........T.GC....A...CG........................................T.....G.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  V  Y  L  E  M  N  S  L  R  A  E  D  T  A  T  Y  Y  C  A  R  E  L  H  R  E  G  Y  N  
                    Query_16     181  ACACGGTGTATCTTGAAATGAATAGCCTGCGCGCCGAGGACACGGCCACATATTACTGTGCGAGAGAATTACATAGAGAAGGCTACAATA  270
V  89.1% (220/247)  IGHV3-53*01  227  .....C........C.......C......A.A...............GTG.................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          

                                      ---------------->                                  
                                      R  G  V  F  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_16     271  GAGGAGTTTTTGCCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (6/6)     IGHD3-10*01  18   --......-------------------------------------------  23
J  95.3% (41/43)    IGHJ4*02     6    --------....A...C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_86200

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            311     4e-87
IGHD2-21*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCGACCGAGGA	ACTGCTA	ACCTCTTCGAGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACCGAGGAACTGCTAACCTCTTCGAGAATGCTCTTAGTATC	AADRGTANLFENALSI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  R  G  H  I  T  S  S  H  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_17     1    ACCCTGTCCCTCACCTGCGCTGTCTCTCGTGGCCACATCACCAGTAGTCACTGGTGGAACTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.9% (221/243)  IGHV4-4*02   49   ...........................G.....TC.....G.......A.........GT..............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  Q  I  Y  Q  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  K  S  R 
                    Query_17     91   GAGTGGATTGGACAAATTTATCAGAGTGGGAGCACCAATTATAACCCGTCCCTCAGGAGTCGAGTCACCATTTCAGTGGACAAGTCCAGG  180
V  90.9% (221/243)  IGHV4-4*02   139  ...........GG....C.....T..............C..C.............A...............A.....A..........A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  L  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  A  D  R  G  T  A  N  L  F 
                    Query_17     181  AACCTCTTCTCCCTGACGCTGACCTCTGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGGCCGACCGAGGAACTGCTAACCTCTTC  270
V  90.9% (221/243)  IGHV4-4*02   229  ....AG..........A.....G...........................G............---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD2-21*02  18   ---------------------------------------------------------------------------.......--------  24

                                      ----------------->                                  
                                       E  N  A  L  S  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_17     271  GAGAATGCTCTTAGTATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  93.8% (45/48)    IGHJ3*02     3    ----.....T..GA......................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_86201

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           322     2e-90
IGHD6-19*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTAATGGGAGAC	CAGTGGCTG	AGACGTCCACACTTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTAATGGGAGACCAGTGGCTGAGACGTCCACACTTCCTTGACTCC	ARDVMGDQWLRRPHFLDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_18     1    GGTCCCTGAGACTCTCCTGTTCAGCGTCTGGATTTACCTTTAGTCGCTATGGCATGCACTGGGTCCGCCAGGCTCCGGGCAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-33*01  47   ....................G.............C.....C...A...............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  Y  D  G  S  D  E  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_18     91   AGTGGCTGGCAGTTATTTCGTATGATGGAAGTGATGAAAACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  91.2% (228/250)  IGHV3-33*01  137  .....G..........A.G.............A..A..T...................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  H  T  I  D  L  Q  M  N  S  L  R  V  E  D  T  A  I  Y  Y  C  A  R  D  V  M  G  D  Q  W  
                    Query_18     181  GGCACACGATTGACCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTATTTATTATTGTGCGAGAGATGTAATGGGAGACCAGTGGC  270
V  91.2% (228/250)  IGHV3-33*01  227  A.A.....C.GT.T......................C...G.........G.G.....C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-19*01  9    -----------------------------------------------------------------------------------.......  15

                                      IMGT--------------------->                                
                                      L  R  R  P  H  F  L  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_18     271  TGAGACGTCCACACTTCCTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  328
D  100.0% (9/9)     IGHD6-19*01  16   ..--------------------------------------------------------  17
J  97.5% (39/40)    IGHJ4*02     7    ------------------......A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_332338

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           363     2e-102
IGHD2-8*01                                                                                            19.9    0.16  
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD2-8*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCC	GGATATTGTTCTA	CCAAGCGGCTCGT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGATCCGGATATTGTTCTACCAAGCGGCTCGTACAACTGGTTCGACCCC	TTDPDIVLPSGSYNWFDP	249	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	244	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_19     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTGTCAGCAATGCCTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.3% (244/256)  IGHV3-15*01  47   .......T..............................T....T..C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  I  V  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_19     91   AGTGGGTTGGCCGTATTAAAAGCAAAATTGTTGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCCAGAGATG  180
V  95.3% (244/256)  IGHV3-15*01  137  ...........................C..A...................................................A.......  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  N  T  V  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  T  T  D  P  D  I  V  
                    Query_19     181  ATTCAAAAAACACGGTGTATCTGCAGATGAATAGCCTGAAAAGCGAGGACACAGCCGTGTATTACTGTACCACAGATCCGGATATTGTTC  270
V  95.3% (244/256)  IGHV3-15*01  227  ..............C..........A.....C..........C.................................--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  92.3% (12/13)    IGHD2-8*01   2    -------------------------------------------------------------------------------.........A.  12

                                      -CDR3-IMGT--------------------->                                  
                                      L  P  S  G  S  Y  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_19     271  TACCAAGCGGCTCGTACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  92.3% (12/13)    IGHD2-8*01   13   ..----------------------------------------------------------------  14
J  100.0% (51/51)   IGHJ5*02     1    ---------------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_86208

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           297     8e-83
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCACCGGTGG	AGCAATGGCTGG	GGAACATACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCACCGGTGGAGCAATGGCTGGGGAACATACTATAATTACGGTATGGACGCC	ARGHRWSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	21	3	6	70
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	221	21	6	89.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  T  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_20     1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGCCCTTCACTGACAGTGGTTATTATTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  89.1% (221/248)  IGHV4-34*12  49   .......................C..T......T......------.......C..C....G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  I  D  T  S 
                    Query_20     91   CTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAACCCGTCCCTCCAGAGTCGAGTCACCATATCAATAGACACGTCC  180
V  89.1% (221/248)  IGHV4-34*12  133  .....G.............T.......AG.....G......................A....................G...........  222
                                       L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  W  S  N  G 
                    Query_20     181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGGGGCCACCGGTGGAGCAATGGC  270
V  89.1% (221/248)  IGHV4-34*12  223  ....................GC............C........................C........----------------------  290
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_20     271  TGGGGAACATACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  93.8% (45/48)    IGHJ6*02     15   ------------------.............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_86209

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-10*01                                                                                           10.3    119  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACA	GGGGA	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACAGGGGATACTACGGTATGGACGTC	ARDDRGYYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_21     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTATTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   .....................................................C.A.....G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  H  Y  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S 
                    Query_21     91   CTGGAGTGGATTGGGAACATCCATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ...............T.....T...................C.................G........T.....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  E  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  D  D  R  G  Y  Y  G 
                    Query_21     181  AAGAACCAGTTCTCCCTGGAGCTGACCTCTATGACAGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGATGACAGGGGATACTACGGT  270
V  94.4% (237/251)  IGHV4-31*03  229  ..................A......G....G....T.................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------------.....---------  20
J  96.0% (48/50)    IGHJ6*02     12   ---------------------------------------------------------------------------------.........  20

                                      -------->                                
                                       M  D  V  W  G  Q  G  I  T  V  T  V  S  S
                    Query_21     271  ATGGACGTCTGGGGCCAAGGGATTACGGTCACCGTCTCCTC  311
J  96.0% (48/50)    IGHJ6*02     21   ......................CC.................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_106842

Length=410
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           419     2e-119
IGHD3-3*01                                                                                            25.7    0.003 
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGTTCTA	ACGACTTTTGGAGTGATTA	GGGAGGATTTTG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGTTCTAACGACTTTTGGAGTGATTAGGGAGGATTTTGACTGGCTCGACGCC	ARDPVLTTFGVIREDFDWLDA	292	354	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	71	4	0	94.7
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	108	6	0	94.7
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	282	14	0	95.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  T  F  T 
                    Query_22     4    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGACATCTGGATACACCTTCACC  93
V  95.3% (282/296)  IGHV1-46*01  1    .....G.....G...........G.............................................G....................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  F  Y  L  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  N  Y 
                    Query_22     94   ACCTTCTATTTACACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAACTAC  183
V  95.3% (282/296)  IGHV1-46*01  91   .G..A....A.G.........................................................................G....  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  D  R  V  T  M  T  S  D  T  S  T  S  T  V  Y  V  E  L  S  S  L  R  S  E  D 
                    Query_22     184  GCACAGAAGTTCCAGGACAGAGTCACCATGACCAGTGATACGTCCACGAGCACAGTCTATGTGGAGCTGAGCAGCCTGAGATCTGAGGAC  273
V  95.3% (282/296)  IGHV1-46*01  181  ................G..................G..C....................CA.............................  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------------------CDR3-IMGT-------------------------->         
                                       T  A  V  Y  Y  C  A  R  D  P  V  L  T  T  F  G  V  I  R  E  D  F  D  W  L  D  A  W  G  Q 
                    Query_22     274  ACGGCCGTGTATTACTGTGCGAGAGATCCAGTTCTAACGACTTTTGGAGTGATTAGGGAGGATTTTGACTGGCTCGACGCCTGGGGCCAG  363
V  95.3% (282/296)  IGHV1-46*01  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  89.5% (17/19)    IGHD3-3*01   6    ------------------------------------....T..........G...-----------------------------------  24
J  95.8% (46/48)    IGHJ5*02     4    -------------------------------------------------------------------.....T.....C...........  26

                                                               
                                       G  T  L  V  T  V  S  S  
                    Query_22     364  GGAACCCTGGTCACCGTCTCCTCAG  388
J  95.8% (46/48)    IGHJ5*02     27   .........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40183344


Query= Query_106843

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           316     2e-88
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGCTCCCCCCTCAC	TATATCAATGGCTGG	GACT	TTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGCTCCCCCCTCACTATATCAATGGCTGGGACTTTTGGCTTC	ACSPLTISMAGTFGF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	221	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  T  P  G  K  E  L  E 
                    Query_23     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATAAGTAGTTATTACTGGAACTGGATCCGGCAGACCCCAGGGAAGGAACTGGAG  90
V  92.1% (221/240)  IGHV4-59*08  49   ......................................C........C.......G.............C............G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  T  G  S  A  N  Y  N  P  S  L  K  S  R  V  S  M  S  V  D  S  S  K  N 
                    Query_23     91   TGGATTGGGTATGTCTATTACACTGGGAGCGCCAACTACAACCCCTCCCTCAAGAGTCGAGTCAGCATGTCGGTGGACTCGTCCAAGAAT  180
V  92.1% (221/240)  IGHV4-59*08  139  ............A.........G.......A.................................C...A..A..A...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  S  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  C  S  P  L  T  I  S  M  A  G 
                    Query_23     181  CAGTTCTCCCTGAGTCTGAGTTCTGTGACCGCCGCAGACACGGCCATCTATTACTGTGCGTGCTCCCCCCTCACTATATCAATGGCTGGG  270
V  92.1% (221/240)  IGHV4-59*08  229  .............AG.....C........................G.G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  86.7% (13/15)    IGHD6-19*01  4    --------------------------------------------------------------------------....G..G.......-  18

                                      ----------->                                  
                                       T  F  G  F  W  G  Q  G  S  L  V  R  V  S  S  
                    Query_23     271  ACTTTTGGCTTCTGGGGCCAGGGATCCCTGGTCCGCGTCTCCTCAG  316
J  88.4% (38/43)    IGHJ4*02     6    ---....A..A.............A........AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_106840

Length=414
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           406     1e-115
IGHD6-13*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              73.7    3e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACAG	GTCCCCCCCCCGCCCTGGGTGT	GTATAGCAGCAGCTGGT	CCCTAACTCCGTTGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGTACAGGTCCCCCCCCCGCCCTGGGTGTGTATAGCAGCAGCTGGTCCCTAACTCCGTTGTCTGACTCC	STGPPPALGVYSSSWSLTPLSDS	290	358	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	175	30	25	5	0	83.3
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	296	7	5	2	0	71.4
Total	N/A	N/A	296	278	18	0	93.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  A
                    Query_24     1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGGTGAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGGTTCACTTTCAGAAACGC  90
V  93.9% (278/296)  IGHV3-15*01  6    ..........G.......G...........A.........................................A...........T.....  95
                                        Q  L  V  E  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A

                                      ---><--------------------FR2-IMGT---------------------><----------CDR2-IMGT---------><----
                                        W  M  R  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  Q  S  K  G  D  G  G  T  T  D  Y
                    Query_24     91   CTGGATGAGGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTCAAAGTAAAGGTGACGGTGGGACAACAGACTA  180
V  93.9% (278/296)  IGHV3-15*01  96   .........C................................................A....C...AC...T.................  185
                                        W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y

                                      ------------------------------------------------FR3-IMGT----------------------------------
                                        A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  I  L  H  L  Q  M  N  S  L  K  T  G  D
                    Query_24     181  CGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACATTCTGCATCTGCAAATGAATAGCCTGAAAACCGGGGA  270
V  93.9% (278/296)  IGHV3-15*01  186  .....................................................CG...T.............C.............A...  275
                                        A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D

                                      ------------------><-----------------------------CDR3-IMGT----------------------------->  
                                        T  A  V  Y  Y  C  S  T  G  P  P  P  A  L  G  V  Y  S  S  S  W  S  L  T  P  L  S  D  S  W
                    Query_24     271  CACAGCCGTGTATTACTGTAGTACAGGTCCCCCCCCCGCCCTGGGTGTGTATAGCAGCAGCTGGTCCCTAACTCCGTTGTCTGACTCCTG  360
V  93.9% (278/296)  IGHV3-15*01  276  ....................CC....----------------------------------------------------------------  301
                                        T  A  V  Y  Y  C  T  T                                                                  
D  100.0% (17/17)   IGHD6-13*01  3    ------------------------------------------------.................-------------------------  19
J  97.6% (40/41)    IGHJ4*02     8    ---------------------------------------------------------------------------------.....A...  16

                                                                      
                                        G  Q  G  T  L  V  T  V  S  S  
                    Query_24     361  GGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  392
J  97.6% (40/41)    IGHJ4*02     17   ................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40604112


Query= Query_106841

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           218     7e-59
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	ARGLLIEDPNYVWGSFRRNHNCYTV	240	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	40	11	0	78.4
CDR2-IMGT	105	125	21	14	7	0	66.7
FR3-IMGT	126	239	114	90	24	0	78.9
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	191	52	0	78.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  R  L  E  
                    Query_25     4    CCCTGAGACTCTCCTGCTCTGTGTCTGGTGACTCCATCGGGACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGAGACTGGAGT  93
V  78.6% (191/243)  IGHV4-59*01  50   .....TCC...A.....A....C.......G.......A.T.G..........AG....A.C........C.......A.G.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  F  F  L  S  T  G  N  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N  
                    Query_25     94   GGCTTGGCTTCTTCTTATCCACTGGCAACACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAATC  183
V  78.6% (191/243)  IGHV4-59*01  140  ..A....G.ATA...AT.A..G...G.G....A..............C...A......A......A.A....T.....C...C.A...C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------------------C
                                      Q  L  S  L  H  L  I  E  V  T  A  A  D  T  A  T  Y  F  R  A  R  G  L  L  I  E  D  P  N  Y  
                    Query_25     184  AGTTGTCTCTCCACCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCCGTGCGAGAGGTCTTCTTATCGAAGATCCCAACTATG  273
V  78.6% (191/243)  IGHV4-59*01  230  ....C..C..GA.G....G.TCT.....................GT.....A.T.........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  94.1% (16/17)    IGHD3-16*02  14   -----------------------------------------------------------------------------------------.  14

                                      DR3-IMGT-------------------------------->                                  
                                      V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  R  G  T  P  V  T  V  S  S  
                    Query_25     274  TTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCGAGGGACACCGGTCACCGTCTCTTCAG  348
D  94.1% (16/17)    IGHD3-16*02  15   ............A...-----------------------------------------------------------  30
J  92.1% (35/38)    IGHJ3*01     13   -------------------------------------...........A.......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_106846

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           299     3e-83
IGHD3-3*01                                                                                            21.8    0.042
IGHJ5*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGATGGGGAAGAG	ACGATTTTTGG	GATGGGGTGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGATGGGGAAGAGACGATTTTTGGGATGGGGTGAGGTTCGACTCT	ARARWGRDDFWDGVRFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	220	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  G  S  G  L  S  L  R  G  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_26     1    GGTCCCTGAGACTCTCCTGTACAGGCTCTGGACTCAGTCTCAGAGGCTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTG  90
V  88.4% (220/249)  IGHV3-48*03  47   ....................G...C.......T...CCT....TA.T...........C.............................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  S  G  S  T  R  H  Y  A  D  S  L  K  G  R  L  T  I  S  R  D  N  A  
                    Query_26     91   AATGGATTTCATACATCAGTAGTAGCGGCAGTACCAGACATTACGCAGACTCTTTGAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  88.4% (220/249)  IGHV3-48*03  137  .G...G..........T........T..T.......T.T.C............G...........T........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      N  N  S  V  Y  L  Q  M  N  S  L  R  V  A  D  T  A  V  Y  H  C  A  R  A  R  W  G  R  D  D  
                    Query_26     181  ACAATTCAGTATATCTGCAGATGAACAGCCTGAGAGTCGCGGACACGGCTGTTTATCACTGTGCGAGAGCCCGATGGGGAAGAGACGATT  270
V  88.4% (220/249)  IGHV3-48*03  227  .G..C...C.G........A................C..A................T............---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-3*01   6    ------------------------------------------------------------------------------------......  11

                                      IMGT--------------------->                                  
                                      F  W  D  G  V  R  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_26     271  TTTGGGATGGGGTGAGGTTCGACTCTTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  330
D  100.0% (11/11)   IGHD3-3*01   12   .....-------------------------------------------------------  16
J  93.3% (42/45)    IGHJ5*01     7    ---------------..........C........A....C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_106847

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           411     5e-117
IGHD5-18*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD5-18*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTTCCCAACCGAAATGTCAAAAC	GTGGATAC	CTGCGCCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTCCCAACCGAAATGTCAAAACGTGGATACCTGCGCCCTCTAC	RDFPNRNVKTWIPAPST	283	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	69	70	68	1	1	97.1
CDR1-IMGT	70	93	24	22	2	0	91.7
FR2-IMGT	94	144	51	49	2	0	96.1
CDR2-IMGT	145	168	24	24	0	0	100
FR3-IMGT	169	282	114	109	5	0	95.6
CDR3-IMGT (germline)	283	288	6	6	0	0	100
Total	N/A	N/A	289	278	10	1	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q   L  E  Q  R  *  K  S  R  G  S  L  *  R  S  P  V  R  A  L  D  T  A  F  P  V  
                    Query_27     1    GCAGCTGGTGCAG-CTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTTCCAGTTA  89
V  96.2% (278/289)  IGHV5-51*03  6    .............T....................................................T...............A....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                      T  G  S  S  G  C  A  R  C  R  G  K  A  W  S  G  W  G  S  S  I  L  V  T  L  I  P  D  T  G  
                    Query_27     90   CTGGATCGTCTGGGTGCGCCAGATGCCGGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGGCC  179
V  96.2% (278/289)  IGHV5-51*03  96   ........G..................C...........................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                      R  P  S  K  A  R  S  P  S  Q  P  T  S  P  S  A  P  P  T  C  N  G  P  A  *  R  P  R  T  P  
                    Query_27     180  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGACCAGCCTGAAGGCCTCGGACACCGC  269
V  96.2% (278/289)  IGHV5-51*03  186  ............................................................G....G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                      P  F  I  I  V  R  D  F  P  N  R  N  V  K  T  W  I  P  A  P  S  T  G  A  R  E  P  W  S  P  
                    Query_27     270  CATTTATTATTGTGCGAGACTTTCCCAACCGAAATGTCAAAACGTGGATACCTGCGCCCTCTACTGGGGCCAGGGAACCCTGGTCACCGT  359
V  96.2% (278/289)  IGHV5-51*03  276  ...G.....C.........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD5-18*01  1    -------------------------------------------........---------------------------------------  8
J  97.4% (37/38)    IGHJ4*02     11   ------------------------------------------------------------..............................  40

                                              
                                      S  P  Q 
                    Query_27     360  CTCCGCAG  367
J  97.4% (37/38)    IGHJ4*02     41   ....T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_106844

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           332     3e-93
IGHD3-22*01                                                                                           46.8    1e-09
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	C	TATTACTATGAAAGTAGTGCTTATTACTAC	GGCAGG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGACTATTACTATGAAAGTAGTGCTTATTACTACGGCAGG	AKDYYYESSAYYYGR	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  G  G  F  R  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_28     1    GGTCCCTGAGACTCTCCTGTGCAGGCGGTGGATTCAGGTTCAGTTCCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-30*18  47   ........................C.TC........CC......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  S  D  G  S  I  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_28     91   AGTGGGTGGCAGTAATATCATCTGATGGAAGCATTAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATCCCC  180
V  92.4% (231/250)  IGHV3-30*18  137  .............T.......A.........T.A....................................................T..A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      Q  F  T  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  Y  Y  Y  E  S  S  
                    Query_28     181  AGTTCACGTTGCATTTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCCAAAGACTATTACTATGAAAGTAGTG  270
V  92.4% (231/250)  IGHV3-30*18  227  ..AA....C..T..C.................................................G.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (28/30)    IGHD3-22*01  2    -----------------------------------------------------------------------...........T.......  20

                                      ---------------->                                  
                                      A  Y  Y  Y  G  R  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_28     271  CTTATTACTACGGCAGGTGGGGCCAGGGAACCCAAGTCACCGTCTCCTCAG  321
D  93.3% (28/30)    IGHD3-22*01  21   G..........----------------------------------------  31
J  94.1% (32/34)    IGHJ4*02     15   -----------------................TG................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_167252

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            279     3e-77
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	13	8	0	61.9
FR3-IMGT	127	240	114	98	16	0	86
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	212	34	0	86.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_29     1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  86.2% (212/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  G  G  P  F  N  Y  A  P  A  L  E  S  R  V  I  I  S  V  D  K  S  K 
                    Query_29     91   GAATGGATTGGGGAGATCCATCATGGCGGACCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCATCATCTCAGTAGACAAGTCCAAG  180
V  86.2% (212/246)  IGHV4-4*01   139  ..G...........A...T.....A.T..GAG.AC.......AAC...T.....A............C...A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_29     181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  86.2% (212/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_29     271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_167253

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     2e-87
IGHD4-4*01                                                                                            21.8    0.042
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-4*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAGGCGGGG	GACTACAGTAA	TTGGGGGGGGCTGGACTACCCAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAGGCGGGGGACTACAGTAATTGGGGGGGGCTGGACTACCCAGACTACGGTATGGACGTC	AKDKAGDYSNWGGLDYPDYGMDV	230	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	46	5	0	90.2
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	114	0	0	100
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	212	12	0	94.6


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  V  T  L  T  T  Y  A  M  S  W  V  R  L  G  P  G  K  R  L  E  W  V  S  G  I  S  G  N 
                    Query_30     14   TCTGGAGTCACTCTTACCACCTATGCCATGAGCTGGGTCCGCCTGGGTCCAGGGAAGCGGCTGGAATGGGTCTCAGGTATTAGTGGTAAT  103
V  94.6% (212/224)  IGHV3-23*01  73   ......T....CT...G..G.......................A..C..........G.......G..........C...........G.  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  V  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 
                    Query_30     104  GGTGTTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAAC  193
V  94.6% (212/224)  IGHV3-23*01  163  ....G.....................................................................................  252
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><-----------------------------CDR3-IMGT---------------
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  K  A  G  D  Y  S  N  W  G  G  L  D  Y  P  D 
                    Query_30     194  AGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATAAGGCGGGGGACTACAGTAATTGGGGGGGGCTGGACTACCCAGAC  283
V  94.6% (212/224)  IGHV3-23*01  253  ............................................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  100.0% (11/11)   IGHD4-4*01   2    ------------------------------------------------------...........-------------------------  12
J  100.0% (50/50)   IGHJ6*02     13   ----------------------------------------------------------------------------------------..  14

                                      -------------->                                 
                                       Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_30     284  TACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  331
J  100.0% (50/50)   IGHJ6*02     15   ................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_167250

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD3-9*01                                                                                            16.1    2.6   
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGAAGGATTCCT	ATATTTTG	GGGAATCGTCATCTC	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGAAGGATTCCTATATTTTGGGGAATCGTCATCTCACGGTATGGACGTC	ARQEGFLYFGESSSHGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  T  F  T  K  Y
                    Query_31     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGGTCTGGATACACCTTTACCAAATA  90
V  95.2% (277/291)  IGHV5-51*01  6    ....................................C........................A....T..........G........GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  S  P  G  D  S  N  T  R  Y  S  P
                    Query_31     91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGCAAAGGCCTGGAGTGGATGGGAATCATCTCTCCTGGTGACTCTAATACCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ..............................G....................G.......A.............G................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  R  S  S  V  K  A  S  D  S  A
                    Query_31     181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGCGGAGCAGCGTGAAGGCCTCGGACAGCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  ............................................G................T........C...............C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  Q  E  G  F  L  Y  F  G  E  S  S  S  H  G  M  D  V  W  G  Q  G  T  T  V
                    Query_31     271  CATGTATTACTGTGCGAGACAAGAAGGATTCCTATATTTTGGGGAATCGTCATCTCACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-9*01   9    ---------------------------------........-------------------------------------------------  16
J  100.0% (47/47)   IGHJ6*02     16   --------------------------------------------------------..................................  49

                                                   
                                        T  V  S  S 
                    Query_31     361  CACCGTCTCCTCA  373
J  100.0% (47/47)   IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_167251

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    116  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_32     1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_32     91   TGGATTGAGTATATCTACTACAGGGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_32     181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_32     271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_167256

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD2-15*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCAGATCAAA	GATCTTGTAGTGGT	AGACGGTGCTACCCCC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCAGATCAAAGATCTTGTAGTGGTAGACGGTGCTACCCCCTTGAGTAC	AKADQRSCSGRRCYPLEY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  A  M  S  W  V  R  Q  A  P  G  K  V  L  
                    Query_33     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGCCATGAGCTGGGTCCGCCAGGCCCCAGGGAAGGTGCTGG  90
V  94.7% (234/247)  IGHV3-23*01  47   ...............................................T.........................T..........G.....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  A  S  D  D  G  T  Y  H  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_33     91   AGTGGGTCTCAGCTATTAGTGCTAGTGATGATGGCACATACCACGCAGACTCCGTGAGGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.7% (234/247)  IGHV3-23*01  137  .....................G.....G..G.A........T...............A................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  F  L  Q  M  S  R  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  D  Q  R  S  C  S  
                    Query_33     181  AGAACACGCTGTTTCTGCAGATGAGCAGACTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGGCAGATCAAAGATCTTGTAGTG  270
V  94.7% (234/247)  IGHV3-23*01  227  ............A......A....A...C......................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD2-15*01  3    ------------------------------------------------------------------------------...A........  14

                                      IMGT--------------------->                                  
                                      G  R  R  C  Y  P  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_33     271  GTAGACGGTGCTACCCCCTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  92.9% (13/14)    IGHD2-15*01  15   ..----------------------------------------------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ------------------....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_167257

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           333     1e-93
IGHD2-15*01                                                                                           14.1    8.7  
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGAGCACTTCGCGATTAAGTATGA	TGCTACT	GGTCCCGATAGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGAGCACTTCGCGATTAAGTATGATGCTACTGGTCCCGATAGTTACTTTGACTAC	ARGEHFAIKYDATGPDSYFDY	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  A  W  I  R  Q  P  P  G  M  G  L  E 
                    Query_34     1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGGCCTGGATCCGCCAGCCCCCTGGGATGGGACTGGAA  90
V  93.5% (229/245)  IGHV4-34*01  49   ......................................................AG..................A....A...G.....G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  R  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_34     91   TGGATTGGCGAAATCAATCGTAGTGGAAGCACCAATTACAACCCGTCCCTCAAGAGCCGAGTCACGATGTCAGTGGACACGTCCAAGAAT  180
V  93.5% (229/245)  IGHV4-34*01  139  ........G..........A...............C....................T........C..A.....A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  E  H  F  A  I  K  Y  D 
                    Query_34     181  CAGTTCTCCCTGAGACTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCGAGCACTTCGCGATTAAGTATGAT  270
V  93.5% (229/245)  IGHV4-34*01  229  .............AG..................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD2-15*01  23   -----------------------------------------------------------------------------------------.  23

                                      MGT-------------------------->                                  
                                       A  T  G  P  D  S  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_34     271  GCTACTGGTCCCGATAGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  100.0% (7/7)     IGHD2-15*01  24   ......----------------------------------------------------------  29
J  100.0% (46/46)   IGHJ4*02     3    ------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_167254

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_35     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_35     91   CTCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..G...............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G 
                    Query_35     181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .........................G................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_35     271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_167255

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           291     6e-81
IGHD3-10*01                                                                                           18.0    0.63 
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGCTGGAGGGGGC	TTCGGGACGTTACTATAA	TGGACGGCGGGGGATTCC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGCTGGAGGGGGCTTCGGGACGTTACTATAATGGACGGCGGGGGATTCCGGACGTC	ARLEGASGRYYNGRRGIPDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	216	30	0	87.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  N  S  H  Y  W  V  W  I  R  Q  S  P  V  K  G 
                    Query_36     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCACCAATAGTCACTACTGGGTCTGGATCCGCCAGTCCCCAGTGAAGGGG  90
V  87.8% (216/246)  IGHV4-39*01  49   ...........................................GT.G....T.........G.............C......G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  V  F  Y  S  G  T  T  S  Y  N  P  S  L  R  G  R  V  T  I  S  V  G  P  S 
                    Query_36     91   CTGGAGTGGATTGGGACCGTCTTTTATAGCGGGACCACCTCCTACAACCCGTCCCTCAGGGGTCGAGTCACCATCTCCGTTGGCCCGTCC  180
V  87.8% (216/246)  IGHV4-39*01  139  ................GTA...A......T....G.....A.................A.A.............A.....A.A.A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       N  N  Q  F  S  L  E  V  R  S  V  T  A  A  D  T  S  I  Y  Y  C  A  R  L  E  G  A  S  G  R 
                    Query_36     181  AACAACCAATTCTCCCTGGAGGTGAGGTCTGTGACCGCCGCGGACACCTCTATTTATTACTGTGCGCGGCTGGAGGGGGCTTCGGGACGT  270
V  87.8% (216/246)  IGHV4-39*01  229  ..G.....G.........A..C....C..............A.....GG..G.G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  83.3% (15/18)    IGHD3-10*01  13   --------------------------------------------------------------------------------......GA..  22

                                      DR3-IMGT------------------------>                                 
                                       Y  Y  N  G  R  R  G  I  P  D  V  W  G  Q  G  T  T  V  T  V  A  S 
                    Query_36     271  TACTATAATGGACGGCGGGGGATTCCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCGCCTCA  336
D  83.3% (15/18)    IGHD3-10*01  23   ..T.....----------------------------------------------------------  30
J  97.5% (39/40)    IGHJ6*02     23   --------------------------..................................T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_137205

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGTCCCGACTGAACTACGGCATGGACGTC	ARLMSRLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  S  N  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_37     1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATCAGCAATTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G.........T.G................A............................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_37     91   TGGATTGAGTACATCTATTACAGGGGGAGTCCCAATAACGACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G...T...........T.....CA....CT..A..................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_37     181  CAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTAATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  .............A.C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  96.0% (48/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_37     271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  309
J  96.0% (48/50)    IGHJ6*02     24   ...................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_99459

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD3-16*01                                                                                           18.0    0.68  
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGAAGGATTCCTATA	TTTGGGGGA	ATCGTCATCTC	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGAAGGATTCCTATATTTGGGGGAATCGTCATCTCACGGTATGGACGTC	ARQEGFLYLGESSSHGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  T  L  T  K  Y
                    Query_38     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGGTCTGGATACACCCTTACCAAATA  90
V  94.8% (276/291)  IGHV5-51*01  6    ....................................C........................A....T..........G.T......GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  S  P  G  D  S  N  T  R  Y  S  P
                    Query_38     91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGCAAAGGCCTGGAGTGGATGGGAATCATCTCTCCTGGTGACTCTAATACCAGGTACAGCCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ..............................G....................G.......A.............G.......A........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  V  K  A  S  D  S  A
                    Query_38     181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCGTGAAGGCCTCGGACAGCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  ............................................G.........................C...............C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  Q  E  G  F  L  Y  L  G  E  S  S  S  H  G  M  D  V  W  G  Q  G  T  T  V
                    Query_38     271  CATGTATTACTGTGCGAGACAAGAAGGATTCCTATATTTGGGGGAATCGTCATCTCACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  94.8% (276/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (9/9)     IGHD3-16*01  15   ------------------------------------.........---------------------------------------------  23
J  100.0% (47/47)   IGHJ6*02     16   --------------------------------------------------------..................................  49

                                                   
                                        T  V  S  S 
                    Query_38     361  CACCGTCTCCTCA  373
J  100.0% (47/47)   IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_205752

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           414     5e-118
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCGTGTGAA	GGTTCGGGGAATTAT	CCCTTGGCAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCGTGTGAAGGTTCGGGGAATTATCCCTTGGCAGAC	AACEGSGNYPLAD	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	69	2	0	97.2
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	292	3	3	0	0	100
Total	N/A	N/A	287	276	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  I  S  C  K  A  S  G  G  T  F  S  S  
                    Query_39     6    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGATCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCT  95
V  96.2% (276/287)  IGHV1-69*06  5    ...................G.................................G....................................  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      S  A  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  D  T  A  N  Y  A  
                    Query_39     96   CTGCTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGGGGATCATCCCTATCTTTGATACAGCAAATTACGCAC  185
V  96.2% (276/287)  IGHV1-69*06  95   A........G..........................................A...................G.........C.......  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  R  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  D  Y  M  E  L  R  S  L  S  S  E  D  T  
                    Query_39     186  AGAGGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGACTACATGGAGCTGCGCAGCCTGAGCTCTGAGGACACGG  275
V  96.2% (276/287)  IGHV1-69*06  185  ...A...............................................C.............A..........A.............  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><--------------CDR3-IMGT-------------->                                  
                                      A  V  Y  Y  C  A  A  C  E  G  S  G  N  Y  P  L  A  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_39     276  CCGTGTATTACTGTGCGGCGTGTGAAGGTTCGGGGAATTATCCCTTGGCAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  362
V  96.2% (276/287)  IGHV1-69*06  275  .................----------------------------------------------------------------------  291
                                      A  V  Y  Y  C  A                                                                       
D  93.3% (14/15)    IGHD3-10*01  11   --------------------------..........G....----------------------------------------------  25
J  100.0% (36/36)   IGHJ4*02     13   ---------------------------------------------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_240155

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           336     1e-94
IGHD1-20*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGAATACAA	GTATAAC	GGAATA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGAATACAAGTATAACGGAATAGGTATGGACGTC	TRSEYKYNGIGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	245	230	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_40     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTAAGTAATAATTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (230/245)  IGHV3-53*01  47   ........................................C....GC..C.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_40     91   AGTGGGTCTCAGTTATTTATAGTGGTGGTACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAAA  180
V  93.9% (230/245)  IGHV3-53*01  137  ......................C.......G..............................A..........................G.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      T  T  L  Y  L  Q  M  N  S  L  R  A  E  D  S  A  V  Y  Y  C  T  R  S  E  Y  K  Y  N  G  I  
                    Query_40     181  CCACACTGTATCTTCAAATGAACAGTTTGAGAGCCGAGGACTCGGCCGTGTATTACTGTACGAGATCAGAATACAAGTATAACGGAATAG  270
V  93.9% (230/245)  IGHV3-53*01  227  A...G....................CC..............A.................G.....-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD1-20*01  2    ----------------------------------------------------------------------------.......-------  8
J  100.0% (45/45)   IGHJ6*02     18   -----------------------------------------------------------------------------------------.  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_40     271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (45/45)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_80412

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            355     3e-100
IGHD3-16*01                                                                                           12.2    31    
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGGC	GGGGGA	CCTACCGTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGCGGGGGACCTACCGTGTTTGACTAC	ARGGGGPTVFDY	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  S  K  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_41     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGTAGTAAATGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  96.0% (237/247)  IGHV4-4*02   49   ...............................G..................C.......G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  Y  H  S  G  S  S  N  Y  S  P  S  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_41     91   GAGTGGATTGGGGATATCTATCATAGTGGGAGCTCCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  96.0% (237/247)  IGHV4-4*02   139  ..............A..................A.........A..........A...................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  G  P  T  V  F 
                    Query_41     181  AATCAGTTCTCCCTGAAGCTGACATCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCGGCGGGGGACCTACCGTGTTT  270
V  96.0% (237/247)  IGHV4-4*02   229  ..C...................GC...........................................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------------......------------  23
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_41     271  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (43/43)   IGHJ4*02     9    ........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_226094

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-72*01                                                                                           375     3e-106
IGHD6-19*01                                                                                           14.1    8.4   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-72*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATCCTCTTT	CAGTGGC	CCTG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGAGAATCCTCTTTCAGTGGCCCTGACTTTGACTAC	ARESSFSGPDFDY	249	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	248	8	0	96.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  D  Y  Y  L  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_42     1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTCAGTGACTACTATTTGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.9% (248/256)  IGHV3-72*01  47   ........................C......................C....CA....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  T  R  N  K  A  N  S  Y  T  P  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_42     91   AGTGGGTTGGCCGTACTAGAAACAAAGCTAACAGTTACACCCCAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  96.9% (248/256)  IGHV3-72*01  137  .........................................A................................................  226
                                      E  W  V  G  R  T  R  N  K  A  N  S  Y  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      G  S  Q  N  S  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  E  S  S  F  S  
                    Query_42     181  GTTCACAGAACTCACTGTATCTGCAAATGAACAGCCTGAAGACCGAGGACACGGCCGTGTATTACTGTGCTAGAGAATCCTCTTTCAGTG  270
V  96.9% (248/256)  IGHV3-72*01  227  A....A..................................A...................................--------------  302
                                      D  S  K  N  S  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R                 
D  100.0% (7/7)     IGHD6-19*01  9    -------------------------------------------------------------------------------------.....  13

                                      GT-------------->                                  
                                      G  P  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_42     271  GCCCTGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (7/7)     IGHD6-19*01  14   ..-------------------------------------------------  15
J  100.0% (45/45)   IGHJ4*02     4    ------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_137200

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	247	223	21	3	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_43     1    ACCCTGTCCCTCACCTGCATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  87
V  90.3% (223/247)  IGHV4-4*02   49   ..................GC.........T...TCC......A..AG........GG.......................G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  K 
                    Query_43     88   GAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCAAG  177
V  90.3% (223/247)  IGHV4-4*02   139  .......................T......A................................G.......A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G  W 
                    Query_43     178  AATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGTGGGTAGCAGTGGCTGG  267
V  90.3% (223/247)  IGHV4-4*02   229  ..CC.GT..........G....GC..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-19*01  6    -----------------------------------------------------------------------------.............  18

                                      -------->                                
                                       L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_43     268  CTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  308
J  95.0% (38/40)    IGHJ4*02     7    -......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_137201

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           367     6e-104
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_44     1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_44     91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.2% (242/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_44     181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  97.2% (242/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_44     271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_240151

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           363     1e-102
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_45     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  96.8% (240/248)  IGHV4-61*08  49   ..................A.................G..................A.....................C...........A  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  P  S 
                    Query_45     91   CTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACCCGTCC  180
V  96.8% (240/248)  IGHV4-61*08  139  ..........................................................................A.........A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_45     181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  96.8% (240/248)  IGHV4-61*08  229  ...................A................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_45     271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_205753

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           369     2e-104
IGHD1-26*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GA	GGTGTAGAGGGAGC	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTAGAGGGAGCCCCCTTTGACTAT	ARGGVEGAPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	263	27	0	90.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  Q  P  G  S  S  V  K  V  S  C  K  T  S  G  G  S  F  S  S  Y
                    Query_46     1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGCAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACCTCTGGAGGTAGTTTCAGCAGCTA  90
V  90.7% (263/290)  IGHV1-69*01  6    ..................G............A................................G.T........C.CC...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  M  P  L  F  G  I  P  N  Y  A  E
                    Query_46     91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGTATCATGCCTCTGTTTGGCATACCAAATTACGCAGA  180
V  90.7% (263/290)  IGHV1-69*01  96   ....................................................G.G.....C...A.C.....T.C.G....C......C.  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  A  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  G  D  T  A
                    Query_46     181  GAAGTTCCAGGGCAGAGTCACGATAACCGCGGACGCATCAACGAGGACAGCCTACATGGAGTTGAGAAGCCTGAGATCTGGGGACACGGC  270
V  90.7% (263/290)  IGHV1-69*01  186  ........................T..........A...C.....C...............C....C.............A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  V  E  G  A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_46     271  CATATATTATTGTGCGAGAGGAGGTGTAGAGGGAGCCCCCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  90.7% (263/290)  IGHV1-69*01  276  .G.G.....C..........---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  85.7% (12/14)    IGHD1-26*01  1    ----------------------...A...T......-----------------------------------------------  14
J  97.7% (43/44)    IGHJ4*02     5    ---------------------------------------.........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_334521

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           352     3e-99
IGHD3-3*01                                                                                            14.1    8.2  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	113	1	0	99.1
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	236	11	0	95.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_47     4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGCC  93
V  95.5% (236/247)  IGHV4-31*02  50   .....TCC...A.....................C......C.............................C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  P  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_47     94   TGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGCCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  95.5% (236/247)  IGHV4-31*02  140  ....G.........T.C.................................T.......................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  
                    Query_47     184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCG  273
V  95.5% (236/247)  IGHV4-31*02  230  ...................................................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  100.0% (51/51)   IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_47     274  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (51/51)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_139848

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           315     5e-88
IGHD3-22*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGTGTACGGAAATCAG	TATGATGGTAGTGGTTA	CCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTGTACGGAAATCAGTATGATGGTAGTGGTTACCCTGACTCC	ARGVYGNQYDGSGYPDS	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  S  A  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_48     1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAGTGCTTACTACTGGAGTTGGGTCCGGCAGCCCCCAGGGAAGGGGCTGGAG  90
V  91.4% (222/243)  IGHV4-59*08  49   ...........................G..............AG............C...A......................A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  L  Y  Y  R  G  S  T  R  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  K 
                    Query_48     91   TGGATTGGGAATCTGTATTACAGAGGTAGTACCAGATACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAG  180
V  91.4% (222/243)  IGHV4-59*08  139  .........T..A.C........T..G..C....AC....................................G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  E  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  Y  G  N  Q  Y  D  G 
                    Query_48     181  CAATTCTCCCTGGAGGTGCGCTCTGTCACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGGGGTGTACGGAAATCAGTATGATGGT  270
V  91.4% (222/243)  IGHV4-59*08  229  ..G.........A..C..A.......G....................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD3-22*01  8    ---------------------------------------------------------------------------------......A..  16

                                      ----------------->                                  
                                       S  G  Y  P  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_48     271  AGTGGTTACCCTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  94.1% (16/17)    IGHD3-22*01  17   ........--------------------------------------------  24
J  97.6% (40/41)    IGHJ4*02     8    -----------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_139849

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           339     2e-95
IGHD2-15*01                                                                                           14.1    9.7  
IGHJ4*02                                                                                              48.8    8e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	GGCC	GGATATT	CATCTGATGGACGTGAATATATGACCCCGTTGTTTGACTTTTG	GGGGC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	64	5	0	92.8
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	287	252	35	0	87.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I  N  Y 
                    Query_49     2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGACAATCTCCTGCCAGGCTTCCGGTTACAGTTTTATCAACTAC  91
V  87.8% (252/287)  IGHV1-18*04  7    .................................................AGG........A.......T.......CC....C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  P  H  K  G  N  T  K  Y  A  Q 
                    Query_49     92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAGGGGCTCGAGTGGATGGGTTGGATCGGCCCGCACAAAGGTAACACAAAATATGCACAG  181
V  87.8% (252/287)  IGHV1-18*04  97   ........C.......................A.....T...........A......A..G.TT....T...........C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  H  L  D  V  R  N  L  R  S  D  D  T  A 
                    Query_49     182  AGTTTCCAGGGCAGAGTCACGATGACCACAGACACATTGACGGGCACAGCTCACCTGGACGTGAGGAACCTGCGATCTGACGACACGGCC  271
V  87.8% (252/287)  IGHV1-18*04  187  .AGC................C................CC...A.......CT..A....GC......G....A.................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      ----------->                                                                              
                                       V  Y  Y  C  S  R  A  G  Y  S  S  D  G  R  E  Y  M  T  P  L  F  D  F  W  G  P  G  N  P  G 
                    Query_49     272  GTCTATTACTGTTCGAGGGCCGGATATTCATCTGATGGACGTGAATATATGACCCCGTTGTTTGACTTTTGGGGGCCAGGGAACCCCGGT  361
V  87.8% (252/287)  IGHV1-18*04  277  ..G.........G....-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  100.0% (7/7)     IGHD2-15*01  2    ---------------------.......--------------------------------------------------------------  8
J  93.5% (29/31)    IGHJ4*02     16   -----------------------------------------------------------------------...............T...  34

                                                  
                                       L  R  L  L 
                    Query_49     362  CTCCGTCTCCTC  373
J  93.5% (29/31)    IGHJ4*02     35   .A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_159938

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           357     1e-100
IGHD3-3*01                                                                                            10.3    123   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCTC	TTTTT	CTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTTTTTCTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFLQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  K  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_50     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAAGAGTGGTGGCTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (238/248)  IGHV4-31*03  49   ..................................C.....GC........T.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  P  L  K  S  R  V  T  I  S  V  A  T  S 
                    Query_50     91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGCCCCTCAAGAGTCGAGTTACAATATCAGTGGCCACGTCT  180
V  96.0% (238/248)  IGHV4-31*03  139  ..................................G.............C..T...................C........A.A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  L  Q  E 
                    Query_50     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTTCTCTTTTTCTCCAAGAA  270
V  96.0% (238/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD3-3*01   10   ----------------------------------------------------------------------------.....---------  14

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_50     271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_159939

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           315     5e-88
IGHD3-22*01                                                                                           12.2    31   
IGHJ3*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TC	ATGATA	AACCTAGATCTTGTC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCATGATAAACCTAGATCTTGTCTTTGATATC	AKVMINLDLVFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	225	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  I  F  S  N  F  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_51     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCATCTTTAGCAACTTTGGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (225/249)  IGHV3-23*01  47   ................................T...C........G..A..C.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  S  D  S  G  E  R  T  E  F  A  D  S  V  K  G  R  F  T  M  S  R  D  N  S  
                    Query_51     91   AGTGGGTCGCGTTTATTAGTGATAGTGGTGAGCGCACAGAGTTCGCGGACTCCGTGAAGGGCCGGTTCACCATGTCCAGAGACAATTCCA  180
V  90.4% (225/249)  IGHV3-23*01  137  ........T.AGC........G........GTA.....T.C.A...A..........................C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      R  N  T  L  Y  L  Q  M  N  R  L  R  V  D  D  T  A  V  Y  Y  C  A  K  V  M  I  N  L  D  L  
                    Query_51     181  GGAACACGTTGTATCTGCAAATGAACAGGCTGAGAGTCGACGACACGGCCGTATATTACTGTGCGAAAGTCATGATAAACCTAGATCTTG  270
V  90.4% (225/249)  IGHV3-23*01  227  A.......C...................C.......C...G............................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD3-22*01  9    -----------------------------------------------------------------------......-------------  14

                                      ---------->                                  
                                      V  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_51     271  TCTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  315
J  97.7% (42/43)    IGHJ3*02     8    --........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_61784

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           277     8e-77
IGHD6-13*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GAA	CAGCTGG	GGAATC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGAACAGCTGGGGAATCGACTAC	ARNSWGIDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	96	18	0	84.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	212	35	0	85.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  H  W  M  H  W  V  R  Q  T  P  G  K  G  L  
                    Query_52     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAGCCACTGGATGCACTGGGTCCGCCAAACTCCAGGGAAGGGGCTGC  90
V  85.8% (212/247)  IGHV3-74*01  47   ...........................................T...T.......................G.................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      L  W  V  A  R  I  D  Y  D  G  G  T  L  D  Y  A  A  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_52     91   TGTGGGTCGCACGCATTGACTACGATGGGGGTACGTTGGACTACGCGGCCTCCGTGGAGGGGCGATTCACCATCTCCAGAGACAACGCCG  180
V  85.8% (212/247)  IGHV3-74*01  137  ........T....T...A.TAGT......A...GCACAAG........A.......A....C...........................A  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      A  N  T  V  Y  L  Q  M  N  S  L  T  V  E  D  S  A  V  Y  Y  C  A  R  N  S  W  G  I  D  Y  
                    Query_52     181  CCAACACGGTCTATCTGCAAATGAATAGTCTAACAGTCGAGGACTCGGCTGTATATTATTGCGCAAGGAACAGCTGGGGAATCGACTACT  270
V  85.8% (212/247)  IGHV3-74*01  227  AG......C.G..............C.....G.G..C.......A.......G.....C..T.....-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD6-13*01  12   ----------------------------------------------------------------------.......-------------  18
J  95.0% (38/40)    IGHJ4*02     9    -----------------------------------------------------------------------------------.......  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  P  
                    Query_52     271  GGGGCCAGGGAACCCTCGTCACCGTCTCCCCAG  303
J  95.0% (38/40)    IGHJ4*02     16   ................G............T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_61786

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           233     1e-63
IGHD2-21*01                                                                                           16.1    2.1  
IGHJ6*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CGCTAT	TATTTTGGTGG	CTTTGGGCC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACGCTATTATTTTGGTGGCTTTGGGCCCTACGGGATGGACGTC	AKRYYFGGFGPYGMDV	221	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
CDR1-IMGT	22	31	10	9	1	0	90
FR2-IMGT	32	82	51	47	4	0	92.2
CDR2-IMGT	83	106	24	15	9	0	62.5
FR3-IMGT	107	220	114	100	14	0	87.7
CDR3-IMGT (germline)	221	226	6	6	0	0	100
Total	N/A	N/A	205	177	28	0	86.3


Alignments

                                      <CDR1-IMG><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----
                                        S  D  A  I  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  A  S  G  S  A  R  Y  Y
                    Query_53     22   CAGCGATGCCATCAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAATGGGTCTCAGCGATTAGTGCAAGTGGAAGTGCTAGGTACTA  111
V  86.3% (177/205)  IGHV3-23*01  90   ....T.......G..C................................G...........T.......GT.....TG..AGC.CA.....  179
                                        S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y

                                      ------------------------------------------------FR3-IMGT----------------------------------
                                        S  D  S  V  K  G  R  F  T  I  A  R  D  N  S  K  N  T  V  Y  L  Q  I  L  S  L  R  A  E  D
                    Query_53     112  TTCAGACTCCGTGAAGGGCCGGTTCACCATCGCTAGAGACAATTCCAAGAATACGGTCTATCTGCAGATATTGAGTTTGAGAGCCGAGGA  201
V  86.3% (177/205)  IGHV3-23*01  180  CG.............................T.C.................C...C.G........A..GAAC..CC.............  269
                                        A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D

                                      ------------------><-------------------CDR3-IMGT------------------>                       
                                        T  A  V  Y  Y  C  A  K  R  Y  Y  F  G  G  F  G  P  Y  G  M  D  V  W  G  H  G  V  T  V  I
                    Query_53     202  CACGGCCGTATATTACTGTGCGAAACGCTATTATTTTGGTGGCTTTGGGCCCTACGGGATGGACGTCTGGGGCCACGGGGTCACAGTCAT  291
V  86.3% (177/205)  IGHV3-23*01  270  .........................-----------------------------------------------------------------  294
                                        T  A  V  Y  Y  C  A  K                                                                  
D  90.9% (10/11)    IGHD2-21*01  5    -------------------------------....G......------------------------------------------------  15
J  85.7% (42/49)    IGHJ6*02     14   ---------------------------------------------------......T.................A...AC...G....C  52

                                                
                                        V  S  S 
                    Query_53     292  CGTATCCTCA  301
J  85.7% (42/49)    IGHJ6*02     53   ...C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_302436

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD6-6*01                                                                                            16.1    2.4  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	T	GAGTTTAGCACCTC	CGCGGAGTATGCGCGCCG	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTGAGTTTAGCACCTCCGCGGAGTATGCGCGCCGATTACTACAATAACTACGCTATGGACGTC	ARVSLAPPRSMRADYYNNYAMDV	240	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_54     4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  95.5% (232/243)  IGHV4-59*01  50   .....TCC...A..............................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  N  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S  
                    Query_54     94   GGATTGGGTATATTAATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAGCC  183
V  95.5% (232/243)  IGHV4-59*01  140  .............CT........................................................................A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------------CDR3
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  V  S  L  A  P  P  R  S  M  
                    Query_54     184  AGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTTCTGTGCGCGAGTGAGTTTAGCACCTCCGCGGAGTATGC  273
V  95.5% (232/243)  IGHV4-59*01  230  ..............C...............................G....A.......A...---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  85.7% (12/14)    IGHD6-6*01   1    ----------------------------------------------------------------....A.....G...------------  14

                                      -IMGT----------------------------->                                 
                                      R  A  D  Y  Y  N  N  Y  A  M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_54     274  GCGCCGATTACTACAATAACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  341
J  91.9% (57/62)    IGHJ6*02     1    ------........T.CT......G................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_159932

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           347     7e-98
IGHD2-21*01                                                                                           10.3    122  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TCTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTCTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFLQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_55     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGGAGTGGTGGTTATTACTGGTCCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (235/248)  IGHV4-31*03  49   ..................................C......C...........C......AG............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_55     91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACTTACTACAACGCGTCCCTCAAGAGTCGACTTACAATATCAGTGGACACGTCT  180
V  94.8% (235/248)  IGHV4-31*03  139  ..................................G...C.........C.................G....C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  L  Q  E 
                    Query_55     181  AAGAACCAGTTCTCCCTGAAGCTGACCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGGTCTTCTCTATTTCTCCAAGAA  270
V  94.8% (235/248)  IGHV4-31*03  229  .........................G...........................G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD2-21*01  22   ---------------------------------------------------------------------------.....----------  26

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_55     271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_159933

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           425     3e-121
IGHD3-3*01                                                                                            12.2    36    
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGCC	TTTCGGAGT	AGGAG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGCCTTTCGGAGTAGGAGTGCTTTTGATATC	ARDAFRSRSAFDI	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	284	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  P  C  K  A  S  E  Y  I  F  T 
                    Query_56     1    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTCCCTGCAAGGCATCTGAATACATCTTCACC  90
V  95.9% (284/296)  IGHV1-46*01  1    .....G.................G....................................T...............G.....C.......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  S  G  S  T  T  Y 
                    Query_56     91   AGCTACTACATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTAGTGGTAGCACAACCTAC  180
V  95.9% (284/296)  IGHV1-46*01  91   ........T...............................................................G............G....  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  G  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_56     181  GCACAGAAGTTTCAGGGCAGAGTCACCATGACCAGGGGCACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGAC  270
V  95.9% (284/296)  IGHV1-46*01  181  ...........C.........................A....................................................  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  L  Y  Y  C  A  R  D  A  F  R  S  R  S  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_56     271  ACGGCCCTTTATTACTGTGCGAGAGACGCCTTTCGGAGTAGGAGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCA  360
V  95.9% (284/296)  IGHV1-46*01  271  ......G.G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  88.9% (8/9)      IGHD3-3*01   11   ------------------------------...T.....---------------------------------------------------  19
J  100.0% (47/47)   IGHJ3*02     4    --------------------------------------------..............................................  49

                                       
                                       
                    Query_56     361  G  361
J  100.0% (47/47)   IGHJ3*02     50   .  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_139842

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            321     6e-90
IGHD5-18*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCCC	TGGATACAGCTATGGTT	CAG	TTTGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCCCTGGATACAGCTATGGTTCAGTTTGTCTAC	ASLDTAMVQFVY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  I  S  G  F  S  I  S  N  Y  W  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_57     1    GGTCCCTGAGACTCTCCTGTGCAATCTCTGGATTCAGTATCAGTAACTATTGGCTGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  91.8% (225/245)  IGHV3-7*03   47   .......................GC...........CCT.T....G.......A.............C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  C  I  K  K  D  E  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_57     91   AGTGGGTGGCCTGCATAAAGAAGGATGAAAGTGAGAAGTACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.8% (225/245)  IGHV3-7*03   137  ...........AA.......C.A....G.........A....................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  M  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  S  L  D  T  A  M  V  Q  
                    Query_57     181  AGAACTCAATGTATTTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCCTGTATTATTGTGCGTCCCTGGATACAGCTATGGTTCAGT  270
V  91.8% (225/245)  IGHV3-7*03   227  ........C.....C.....................C.............G.......C......-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------------------------------------------------.................----  18
J  97.6% (40/41)    IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                
                                      F  V  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_57     271  TTGTCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  310
J  97.6% (40/41)    IGHJ4*02     7    ...A....................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_139843

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_58     1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  87.0% (214/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_58     91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCACCATCTCAGTAGACAAGTCCAAG  180
V  87.0% (214/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A................A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_58     181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  87.0% (214/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_58     271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_139844

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           300     9e-84
IGHD2-2*01                                                                                            27.6    8e-04
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTTCTC	TATTGTAGTTGTACCAG	TCCCGGATGAAGACAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACTTCTCTATTGTAGTTGTACCAGTCCCGGATGAAGACAAGTACGGTCTGGACGCC	AKDFSIVVVPVPDEDKYGLDA	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  S  A  M  T  W  V  R  Q  P  P  G  K  G  L  
                    Query_59     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTTAGCACTTCCGCCATGACCTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  88.4% (221/250)  IGHV3-23*01  47   .....................................C.......GC.AT.......G.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  L  T  G  T  G  G  D  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_59     91   AGTGGGTCGCAAGTCTTACTGGGACTGGGGGCGACACACACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGATAATCCCA  180
V  88.4% (221/250)  IGHV3-23*01  137  ........T..GC.A...G...T.G...T..TAG....T.........................G.................C...T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  K  T  L  Y  L  E  M  T  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  F  S  I  V  V  V  
                    Query_59     181  AGAAAACATTGTATCTGGAAATGACGAGTCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGACTTCTCTATTGTAGTTGTAC  270
V  88.4% (221/250)  IGHV3-23*01  227  ....C..GC........C......AC..C.........................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  94.1% (16/17)    IGHD2-2*01   5    ----------------------------------------------------------------------------.........A....  18

                                      DR3-IMGT-------------------------->                                 
                                      P  V  P  D  E  D  K  Y  G  L  D  A  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_59     271  CAGTCCCGGATGAAGACAAGTACGGTCTGGACGCCTGGGGCCAAGGGACAACAGTCATCGTCTCCTCA  338
D  94.1% (16/17)    IGHD2-2*01   19   ...-----------------------------------------------------------------  21
J  89.6% (43/48)    IGHJ6*02     15   --------------------......A......T...............C..G....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_139845

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           333     1e-93
IGHD1-26*01                                                                                           18.0    0.58 
IGHJ6*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGAG	GTGGGAGCT	TCAGTGGTGAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCGAGGTGGGAGCTTCAGTGGTGATTACGGTATGGACGTC	ARDRGGSFSGDYGMDV	237	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	24	0	0	100
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	17	7	0	70.8
FR3-IMGT	123	236	114	113	1	0	99.1
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	233	223	10	0	95.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  C  T 
                    Query_60     12   TGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATGTACT  101
V  95.7% (223/233)  IGHV3-48*03  64   .....................................................................................AC.T.  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  Q  S  G  F  T  R  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_60     102  AGTCAAAGTGGTTTTACCAGACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTG  191
V  95.7% (223/233)  IGHV3-48*03  154  ...AGT......AG.....T.T....................................................................  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  G  G  S  F  S  G  D  Y  G  M  D 
                    Query_60     192  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGACCGAGGTGGGAGCTTCAGTGGTGATTACGGTATGGAC  281
V  95.7% (223/233)  IGHV3-48*03  244  .....................................................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (9/9)     IGHD1-26*01  7    ----------------------------------------------------------.........-----------------------  15
J  100.0% (48/48)   IGHJ6*02     15   ------------------------------------------------------------------------------............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_60     282  GTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  100.0% (48/48)   IGHJ6*02     27   ....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_139846

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           355     3e-100
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCACTGGCGC	ATAGCAGCTCGTC	GGGAGGGGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCACTGGCGCATAGCAGCTCGTCGGGAGGGGGGCTTGACCAC	ASLAHSSSSGGGLDH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_61     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.3% (236/245)  IGHV3-30*03  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  V  K  W  Y  A  D  S  L  K  G  R  I  T  I  S  R  D  N  S  
                    Query_61     91   AGTGGGTGGCAGTTATATCATATGATGGAAGTGTTAAATGGTATGCAGACTCCCTGAAGGGCCGAATCACCATCTCCAGAGACAATTCCA  180
V  96.3% (236/245)  IGHV3-30*03  137  ................................AA.....AC............G...........T........................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  L  A  H  S  S  S  S  
                    Query_61     181  AGAACACGCTGTATCTAGAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTCTATTACTGTGCGTCACTGGCGCATAGCAGCTCGTCGG  270
V  96.3% (236/245)  IGHV3-30*03  227  ................GC..................................G............-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (13/13)   IGHD6-6*01   5    ---------------------------------------------------------------------------.............--  17

                                      ---------------->                                  
                                      G  G  G  L  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_61     271  GAGGGGGGCTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.6% (41/42)    IGHJ4*02     7    ---------.....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_159935

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           364     5e-103
IGHD3-3*01                                                                                            14.1    8.3   
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGGCTAC	ARGAGGLFIFVAPFGY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	239	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_62     1    ACCCTGTCCCTCACCTGCACTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGCAGGGGCTGGAG  90
V  97.6% (239/245)  IGHV4-34*01  49   ..................G..............................A............................A...........  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  Y 
                    Query_62     91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGTAC  180
V  97.6% (239/245)  IGHV4-34*01  139  .........................................................................T.............A..  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_62     181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  97.6% (239/245)  IGHV4-34*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_62     271  GCCCCTTTTGGCTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  319
J  95.3% (41/43)    IGHJ4*02     6    ------....A.....................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_66256

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           367     5e-104
IGHD3-3*01                                                                                            39.1    2e-07 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	T	TTACGATTTTTTGAGTGGTTATT	N/A	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATTTACGATTTTTTGAGTGGTTATTACTTC	AIYDFLSGYYF	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	238	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_63     1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (238/241)  IGHV4-34*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_63     91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTGAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (238/241)  IGHV4-34*01  139  ..................................................C.......................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  I  Y  D  F  L  S  G  Y  Y  F 
                    Query_63     181  CAGTTCTCCCTGAAACTGAGCTCTCTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGATTTACGATTTTTTGAGTGGTTATTACTTC  270
V  98.8% (238/241)  IGHV4-34*01  229  ..............G.........G....................................-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.7% (22/23)    IGHD3-3*01   4    --------------------------------------------------------------...........G...........-----  26
J  97.4% (38/39)    IGHJ4*02     10   -------------------------------------------------------------------------------------...A.  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_63     271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  97.4% (38/39)    IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_66254

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     7e-91
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TCTAGATGGCCCCAAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTAGATGGCCCCAATTACTACTACGGGATGCACGTC	ARDLDGPNYYYGMHV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  S  L  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_64     1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCTCCCTCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTGGAA  90
V  92.2% (226/245)  IGHV4-59*01  49   ...................C................A..............................................A.....G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  F  S  G  N  T  N  Y  N  P  S  L  K  G  R  V  N  I  S  G  D  T  S  Q  N 
                    Query_64     91   TGGATTGGCTATATTCATTTCAGTGGAAACACCAACTACAACCCCTCCCTCAAGGGTCGGGTCAACATATCAGGAGACACGTCCCAGAAC  180
V  92.2% (226/245)  IGHV4-59*01  139  ........G.....CT...A......G.G.........................A....A....C........T..........A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  D  G  P  N  Y  Y  Y 
                    Query_64     181  CAGTTCTCCCTGAAGGTGAACTCTGTTACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGATCTAGATGGCCCCAATTACTACTAC  270
V  92.2% (226/245)  IGHV4-59*01  229  ...............C...G......G..........................C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.6% (48/53)    IGHJ6*02     9    ---------------------------------------------------------------------------------.........  17

                                      ----------->                                
                                       G  M  H  V  W  G  P  G  T  A  V  I  V  S  S
                    Query_64     271  GGGATGCACGTCTGGGGCCCAGGGACCGCGGTCATCGTCTCCTC  314
J  90.6% (48/53)    IGHJ6*02     18   ..T...G............A.......A......C.........  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_66253

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           333     1e-93
IGHD3-3*01                                                                                            10.3    123  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTCTTC	TTTTT	CTCCAAGAGAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTCTTCTTTTTCTCCAAGAGAGAGTCTACTACTTTGACTAC	ARSLLFLQERVYYFDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  K  S  G  G  Y  Y  W  S  W  V  R  Q  H  P  G  K  G  
                    Query_65     4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTTCATCAAGAGTGGTGGCTACTACTGGAGCTGGGTCCGCCAGCACCCAGGGAAGGGCC  93
V  93.1% (230/247)  IGHV4-31*02  50   .....TCC...A.....................C.....GC........T...............A........................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  A  T  S  
                    Query_65     94   TGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGCCACGTCTA  183
V  93.1% (230/247)  IGHV4-31*02  140  .................................G.............C......................C........A.A........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  S  L  L  F  L  Q  E  
                    Query_65     184  AGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACTGTCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTCTTCTTTTTCTCCAAGAGA  273
V  93.1% (230/247)  IGHV4-31*02  230  ....................C....C..........C..............................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD3-3*01   10   ---------------------------------------------------------------------------.....----------  14

                                      T------------------>                                  
                                      R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_65     274  GAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (48/48)   IGHJ4*02     1    ------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_66252

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTGA	TATGGTTCGCGGAGTT	CTTGAGAGGGAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTGATATGGTTCGCGGAGTTCTTGAGAGGGAGGACTAC	ARLDMVRGVLEREDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_66     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGCAAGGGTTCTGGGTACAGCTTTTCCACCTA  90
V  97.6% (282/289)  IGHV5-51*03  6    ............................................................T...........A.........A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  S  P
                    Query_66     91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACAGCCC  180
V  97.6% (282/289)  IGHV5-51*03  96   ........G........................................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_66     181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  ........A.................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  L  D  M  V  R  G  V  L  E  R  E  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_66     271  CATGTATTACTGTGCGAGACTTGATATGGTTCGCGGAGTTCTTGAGAGGGAGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  97.6% (282/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  93.8% (15/16)    IGHD3-10*01  8    ------------------------.........G......--------------------------------------------------  23
J  100.0% (40/40)   IGHJ4*02     9    ----------------------------------------------------......................................  46

                                        
                                        
                    Query_66     361  AG  362
J  100.0% (40/40)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_66251

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           335     4e-94
IGHD1-26*01                                                                                           10.3    124  
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	A	TGGGA	AACGTAGGGATGCCGACAATCGTC	GATGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGAAACGTAGGGATGCCGACAATCGTCGATGTTTTTGATGTC	ARMGNVGMPTIVDVFDV	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	25	1	0	96.2
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  S  L  T  C  S  V  S  G  G  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_67     2    CCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  91
V  93.1% (231/248)  IGHV4-31*03  50   ..................C.....................C.................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Q  I  Y  H  T  G  S  S  D  Y  S  P  S  L  K  S  R  L  T  I  A  V  D  T  S  
                    Query_67     92   TGGAGTGGATCGGGCAAATCTATCACACTGGGAGCAGCGACTATAGCCCGTCCCTCAAGAGTCGACTTACCATAGCTGTAGACACGTCTA  181
V  93.1% (231/248)  IGHV4-31*03  140  ..........T...T.C......T...G........C.T....C.A...................G........T.A.............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  M  G  N  V  G  M  P  
                    Query_67     182  AGAACCAGTTCTCCCTGAACCTGAGTTCTGTGACGGCCGCGGACACGGCCGTGTATTACTGTGCGAGAATGGGAAACGTAGGGATGCCGA  271
V  93.1% (231/248)  IGHV4-31*03  230  ...................G.....C........T.................................----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  8    ---------------------------------------------------------------------.....----------------  12

                                      GT-------------------->                                  
                                      T  I  V  D  V  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_67     272  CAATCGTCGATGTTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  328
J  98.0% (48/49)    IGHJ3*01     2    --------....C............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_66250

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           375     2e-106
IGHD6-13*01                                                                                           21.8    0.039 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGAG	AGCAGCAGCTG	AA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGAGCAGCAGCTGAATGACTAC	ARDREQQLNDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_68     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (245/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  V  S  S  I  S  S  S  S  S  Y  M  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_68     91   AGTGCGTCTCATCCATTAGTAGTAGCAGTAGTTACATGTACTACGCAGACGCAGTGAAGGGCCGATTCACCATCTCCAGAGACGACGCCA  180
V  98.0% (245/250)  IGHV3-21*01  137  ....G....................T...........A............T................................A......  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  E  Q  Q  L  N  
                    Query_68     181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGAGAGCAGCAGCTGAATG  270
V  98.0% (245/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  7    ---------------------------------------------------------------------------...........----  17
J  97.6% (40/41)    IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  G  G  Q  G  T  L  V  T  V  S  S  
                    Query_68     271  ACTACGGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.6% (40/41)    IGHJ4*02     10   .....T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_66259

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     3e-115
IGHD6-6*01                                                                                            14.1    9.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTC	ATTREQLVPIFDF	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	105	9	0	92.1
CDR3-IMGT (germline)	289	292	4	4	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_69     2    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCA  91
V  94.5% (275/291)  IGHV5-51*01  2    ....G................................................................G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  E  T  K  Y  
                    Query_69     92   GTTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCGTCTATCCTGGTGACTCTGAGACCAAATACA  181
V  94.5% (275/291)  IGHV5-51*01  92   .C..........G..........................................G...A...................T....G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  A  S  G  T  A  F  L  Q  W  D  S  L  K  A  S  D  
                    Query_69     182  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGGCCAGCGGCACCGCCTTCCTGCAGTGGGACAGCCTGAAGGCCTCGGACC  271
V  94.5% (275/291)  IGHV5-51*01  182  ...........C.............................T...T.A.........A..........AG...................A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      P  A  M  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_69     272  CCGCCATGTATTACTGTGCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  361
V  94.5% (275/291)  IGHV5-51*01  272  .....................---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -----------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------.......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_66258

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     3e-115
IGHD6-25*01                                                                                           14.1    9.4   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAGG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTC	ARQSSAGRTRYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  D  Y
                    Query_70     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATTCGACTTTACCGACTA  90
V  94.5% (275/291)  IGHV5-51*01  6    ....................................C.............................T.......A.AG.......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_70     91   CTGGATCGTCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACGAGATACAGTCC  180
V  94.5% (275/291)  IGHV5-51*01  96   ........G..............T......................................................C........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_70     181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (275/291)  IGHV5-51*01  186  .............................C.............A.......................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  F  C  A  R  Q  S  S  A  G  R  T  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_70     271  CATGTATTTTTGTGCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTC  360
V  94.5% (275/291)  IGHV5-51*01  276  ........AC...........---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------............................................C..  61

                                       
                                       
                    Query_70     361  A  361
J  97.9% (47/48)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_240159

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-10*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTATCGTTCGGGGACTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATCGTTCGGGGACTTATTTTGACTAC	ARGLYYYRSGTYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_71     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ...................................................T.........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_71     91   CTGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAATTACCATATCAGTAGACACCTCC  180
V  96.4% (241/250)  IGHV4-31*03  139  ...............T..................................................G...................G..T  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  S  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  R  S 
                    Query_71     181  AAGAACCAGTCCTCCCTGAACCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCTCTATTACTATCGTTCG  270
V  96.4% (241/250)  IGHV4-31*03  229  ..........T.........G.....C...........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (22/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------.........G.....  16

                                      ----------------->                                  
                                       G  T  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_71     271  GGGACTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  91.7% (22/24)    IGHD3-10*01  17   ....G....-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    ---------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_115913

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD6-13*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              117     1e-30 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	GCGTG	TAGCGGCAGCTGG	ACATAATGC	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGCGTGTAGCGGCAGCTGGACATAATGCTTACTACTACTACTACGGTATGGACGTC	ARQRVAAAGHNAYYYYYGMDV	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	283	8	0	97.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  E  S  L  K  I  S  C  T  G  S  G  Y  S  F  T  N  Y
                    Query_72     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCCGGGGAGTCTCTGAAGATCTCCTGTACGGGTTCTGGATACAGCTTTACCAACTA  90
V  97.3% (283/291)  IGHV5-51*01  6    ...............................A..............................A.......................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  D  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  G  T  R  Y  S  P
                    Query_72     91   CTGGATCGACTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGGTACCAGATACAGCCC  180
V  97.3% (283/291)  IGHV5-51*01  96   ........G.................................................................A...............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  P  A  T  A
                    Query_72     181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCCCGGCCACCGC  270
V  97.3% (283/291)  IGHV5-51*01  186  ...............................................................................T...A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        I  Y  Y  C  A  R  Q  R  V  A  A  A  G  H  N  A  Y  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T
                    Query_72     271  CATATATTACTGTGCGAGACAGCGTGTAGCGGCAGCTGGACATAATGCTTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGAC  360
V  97.3% (283/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.3% (12/13)    IGHD6-13*01  6    --------------------------....A........---------------------------------------------------  18
J  100.0% (61/61)   IGHJ6*02     2    ------------------------------------------------..........................................  43

                                                         
                                        T  V  T  V  S  S 
                    Query_72     361  CACGGTCACCGTCTCCTCA  379
J  100.0% (61/61)   IGHJ6*02     44   ...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_99127

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           265     5e-73
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTCGCCAA	ATTACGATTTCTGGAATGGTTTTTA	CATTACCAAAAAAGGA	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCGCCAAATTACGATTTCTGGAATGGTTTTTACATTACCAAAAAAGGAGCTTTTGATATC	ARESPNYDFWNGFYITKKGAFDI	225	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	98	51	43	2	6	84.3
CDR2-IMGT	99	110	21	10	2	9	47.6
FR3-IMGT	111	224	114	101	13	0	88.6
CDR3-IMGT (germline)	225	232	8	8	0	0	100
Total	N/A	N/A	247	210	22	15	85


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  N  F  N  H  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_73     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAATTTTAACCACATTAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  85.0% (210/247)  IGHV3-53*01  47   ..........................................G.AGC...T....G.G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V                 G  D  N  T  A  Y  A  E  S  V  R  G  R  F  T  I  S  R  D  N  S  M  
                    Query_73     91   AGTGGGTC---------------GGTGATAACACAGCCTATGCAGAGTCCGTGAGGGGCCGATTCACTATCTCCAGAGACAATTCCATGA  165
V  85.0% (210/247)  IGHV3-53*01  137  ........TCAGTTATTTATAGC....G..G....TA...C.....C.......A............C...................A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------------C
                                      N  T  V  F  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R  E  S  P  N  Y  D  F  W  
                    Query_73     166  ACACGGTGTTTCTTCAAATGAACAGCCTGAGAGCCGGGGACACGGCCGTTTACTATTGTGCGAGAGAGTCGCCAAATTACGATTTCTGGA  255
V  85.0% (210/247)  IGHV3-53*01  227  .....C...A..........................A............G..T..C...........-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  88.0% (22/25)    IGHD3-3*01   3    ---------------------------------------------------------------------------..........T....  17

                                      DR3-IMGT----------------------------->                                  
                                      N  G  F  Y  I  T  K  K  G  A  F  D  I  W  G  Q  G  T  V  V  I  V  S  S  
                    Query_73     256  ATGGTTTTTACATTACCAAAAAAGGAGCTTTTGATATCTGGGGCCAGGGGACAGTGGTCATCGTCTCTTCAG  327
D  88.0% (22/25)    IGHD3-3*01   18   G.....A...--------------------------------------------------------------  27
J  93.5% (43/46)    IGHJ3*02     5    --------------------------....................A......A......C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_99126

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     4e-93
IGHD2-21*02                                                                                           18.0    0.61 
IGHJ1*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTCACAGTATTGTGGCGC	TGGCGACTGCTA	CGCCTCC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCACAGTATTGTGGCGCTGGCGACTGCTACGCCTCCGCTGAGTACTTCCAGCAC	ARHSQYCGAGDCYASAEYFQH	240	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_74     4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAGT  93
V  93.4% (228/244)  IGHV4-59*08  50   .....TCC...A....C...........................T..........C.................A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N  
                    Query_74     94   GGATTGGGTATATCTATTCCAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGTTAGACACGTCCAAGAACC  183
V  93.4% (228/244)  IGHV4-59*08  140  ..................A...............C...................................AG..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------------CDR3-IM
                                      H  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  S  Q  Y  C  G  A  G  D  
                    Query_74     184  ACTTCTCCCTGACCCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATTCACAGTATTGTGGCGCTGGCGACT  273
V  93.4% (228/244)  IGHV4-59*08  230  .G..........AG....G.............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  91.7% (11/12)    IGHD2-21*02  13   ----------------------------------------------------------------------------------...T....  20

                                      GT-------------------------->                                  
                                      C  Y  A  S  A  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_74     274  GCTACGCCTCCGCTGAGTACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  336
D  91.7% (11/12)    IGHD2-21*02  21   ....-----------------------------------------------------------  24
J  96.2% (50/52)    IGHJ1*01     1    -----------.....A.........................................C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_99125

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           329     3e-92
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATTCTTCCAGCAC	ARLGSYYASTGYGRDAEFFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_75     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  S  L  K  P  R  V  T  F  S  L  D  T  S  K  N 
                    Query_75     91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCTCCCTCAAGCCTCGAGTCACCTTTTCATTAGACACGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*08  139  ...A....G......T.......T..............................AG..........A.A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G 
                    Query_75     181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGT  270
V  93.0% (227/244)  IGHV4-59*08  229  .............A......C..........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                
                                       Y  G  R  D  A  E  F  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S
                    Query_75     271  TATGGCCGAGACGCTGAATTCTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTC  332
J  92.0% (46/50)    IGHJ1*01     1    ------------.......A..................G.......T....A..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_99124

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            282     4e-78
IGHD1-1*01                                                                                            14.1    9.9  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGAAATGT	TGGAACG	GGGTCCTTCCAAGAGCGATGTGCCCCCTTCGGACTACTCGTCTTCTGTGCCATATCATAGCGACTTTTATGGAT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACGAAATGTTGGAACGGGGTCCTTCCAAGAGCGATGTGCCCCCTTCGGACTACTCGTCTTCTGTGCCATATCATAGCGACTTTTATGGATTGGACGTC	ARDEMLERGPSKSDVPPSDYSSSVPYHSDFYGLDV	243	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	15	9	0	62.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	215	35	0	86


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  T  A  S  G  F  N  F  R  W  S  S  M  T  W  V  R  Q  A  P  G  T  G  L  
                    Query_76    1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCAATTTTAGATGGAGTTCCATGACCTGGGTCCGCCAGGCCCCAGGGACGGGGCTGG  90
V  86.0% (215/250)  IGHV3-7*03  47   ....................G...............CC.....TA.CTA..GG....G...............T.......A........  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  N  E  G  G  R  P  T  F  Y  G  D  S  V  K  G  R  F  A  I  S  R  D  N  S  
                    Query_76    91   AGTGGGTGGCCAACATAAACGAGGGTGGACGTCCGACATTCTATGGGGACTCTGTGAAGGGCCGATTCGCCATCTCCAGAGACAATTCCA  180
V  86.0% (215/250)  IGHV3-7*03  137  ...................GC.A.A....A..GA..A..A.....T......................A................CG...  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><---------------------------
                                     K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  I  Y  Y  C  A  R  D  E  M  L  E  R  G  
                    Query_76    181  AGAACTCGCTATATCTGCAAATGGACAGCCTGAGAGTCGAAGACACGGCCATATATTACTGCGCGCGAGACGAAATGTTGGAACGGGGTC  270
V  86.0% (215/250)  IGHV3-7*03  227  .......A..G............A............C...G.........G.G........T...A....--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-1*01  9    ------------------------------------------------------------------------------.......-----  15

                                     --------------------CDR3-IMGT----------------------------------------------->             
                                     P  S  K  S  D  V  P  P  S  D  Y  S  S  S  V  P  Y  H  S  D  F  Y  G  L  D  V  W  G  Q  G  
                    Query_76    271  CTTCCAAGAGCGATGTGCCCCCTTCGGACTACTCGTCTTCTGTGCCATATCATAGCGACTTTTATGGATTGGACGTCTGGGGCCAAGGGA  360
J  100.0% (38/38)   IGHJ6*02    22   ---------------------------------------------------------------------.....................  42

                                                      
                                     T  T  V  T  V  S 
                    Query_76    361  CCACGGTCACCGTCTCC  377
J  100.0% (38/38)   IGHJ6*02    43   .................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_99123

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           336     1e-94
IGHD1-26*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GGG	GGGAGCTACT	CTCCTTTT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGGGGGGAGCTACTCTCCTTTTTGCTTTTGATATC	VKGGATLLFAFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  M  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_77     1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAATATGTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTAG  90
V  93.5% (231/247)  IGHV3-64*05  47   ..........................................G..GC.........................................G.  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  V  S  S  I  T  S  N  A  E  S  T  Y  Y  T  D  S  V  K  D  R  F  T  I  S  R  D  N  S  
                    Query_77     91   AATCTGTCTCCTCTATTACTAGTAATGCGGAGAGCACATACTACACAGACTCAGTGAAGGACAGATTCACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-64*05  137  ...A...T..AG......G........G..GT............G...............G.............................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  G  G  A  T  L  L  F  
                    Query_77     181  AGAACACGCTGTATCTTCAAATGAGCAGTCTGAGACCTGAGGACACGGCTGTGTATTACTGTGTGAAGGGGGGAGCTACTCTCCTTTTTG  270
V  93.5% (231/247)  IGHV3-64*05  227  ..............G....................G...............................-----------------------  293
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V                          
D  100.0% (10/10)   IGHD1-26*01  9    ----------------------------------------------------------------------..........----------  18
J  97.9% (46/47)    IGHJ3*02     4    ----------------------------------------------------------------------------------------..  5

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_77     271  CTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  315
J  97.9% (46/47)    IGHJ3*02     6    ..........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_99122

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD1-1*01                                                                                            12.2    30   
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTT	TACAAC	GGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTTACAACGGGACTACTTTGACTAC	ARVLQRDYFDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  N  S  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_78     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAATAGCTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ......................................C.G...T....A...............G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       Y  I  G  F  I  Y  Y  T  G  S  A  Y  Y  S  S  S  L  K  S  R  V  T  I  L  I  D  T  S  K  K 
                    Query_78     91   TACATTGGATTTATCTATTACACTGGGAGCGCCTACTACAGTTCCTCCCTCAAGAGTCGAGTCACCATATTAATAGACACGTCCAAAAAG  180
V  90.6% (221/244)  IGHV4-59*01  139  .GG.....G.A...........G.......A..A......ACC...........................C.G.............G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       E  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  L  Q  R  D  Y  F  D  Y 
                    Query_78     181  GAATTCTCCCTGAAACTGAGCTCAGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTTTTACAACGGGACTACTTTGACTAC  270
V  90.6% (221/244)  IGHV4-59*01  229  C.G...........G........T........................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-1*01   3    -------------------------------------------------------------------......-----------------  8
J  100.0% (48/48)   IGHJ4*02     1    ----------------------------------------------------------------------------..............  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_78     271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (48/48)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_99121

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           389     2e-110
IGHD2-21*01                                                                                           12.2    35    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTTCTTTGGCGATTTCGA	CTATTC	GGGCCCCCTATCCACCCCACA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTCTTTGGCGATTTCGACTATTCGGGCCCCCTATCCACCCCACAAC	ARLSLAISTIRAPYPPHN	267	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	25	5	0	83.3
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	152	21	21	0	0	100
FR3-IMGT	153	266	114	108	6	0	94.7
CDR3-IMGT (germline)	267	273	7	7	0	0	100
Total	N/A	N/A	273	261	12	0	95.6


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  A  S  I  R  S  T  N  F  Y  W  G  W  
                    Query_79     1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGGAGTACTAATTTCTACTGGGGCTGGA  90
V  95.6% (261/273)  IGHV4-39*01  26   ................T.....................................G.........C....G..G..A..............  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  G  R  
                    Query_79     91   TCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGGGTCGAG  180
V  95.6% (261/273)  IGHV4-39*01  116  ...................................................................................A......  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  D  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  L  Y  Y  R  A  
                    Query_79     181  TCACCATATCCGTAGACACGTCCAAGGACCAGTTCTCCCTGAAACTGAACTCTGTGACCGCCGCAGACACGGCTCTGTATTACCGTGCGA  270
V  95.6% (261/273)  IGHV4-39*01  206  ..........................A................G....G.........................G........T......  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      -------------------CDR3-IMGT--------------------->                                  
                                      R  L  S  L  A  I  S  T  I  R  A  P  Y  P  P  H  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_79     271  GACTTTCTTTGGCGATTTCGACTATTCGGGCCCCCTATCCACCCCACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  354
V  95.6% (261/273)  IGHV4-39*01  296  ...---------------------------------------------------------------------------------  298
                                      R                                                                                   
D  100.0% (6/6)     IGHD2-21*01  22   ---------------------......---------------------------------------------------------  27
J  100.0% (36/36)   IGHJ4*02     13   ------------------------------------------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_250168

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           307     1e-85
IGHD3-10*01                                                                                           10.3    120  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TAGGACCGGATG	GGTTC	AGTTGAT	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAGGACCGGATGGGTTCAGTTGATCTACCTTGACTCC	ARHRTGWVQLIYLDS	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	220	24	0	90.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  R  S  V  S  G  G  S  I  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_80     4    CCCTGAGACTCTCCCGTAGTGTCTCTGGTGGCTCCATCAGTGGTTATTCCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  90.2% (220/244)  IGHV4-59*08  50   .....TCC...A..T.C.C......................A....C.A.........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  F  I  S  Y  S  G  N  T  N  S  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S  
                    Query_80     94   GGATTGGGTTTATCTCATACAGTGGGAATACCAACTCCAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCGAAGAGTC  183
V  90.2% (220/244)  IGHV4-59*08  140  .........A.....AT..........GC.......A.............................................C....AC.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  I  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  H  R  T  G  W  V  Q  L  I  
                    Query_80     184  AATTCTCCCTGAAGTTGATTTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAGACATAGGACCGGATGGGTTCAGTTGATCT  273
V  90.2% (220/244)  IGHV4-59*08  230  .G............C...GC...............................A............--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (5/5)     IGHD3-10*01  11   ----------------------------------------------------------------------------.....---------  15
J  93.3% (42/45)    IGHJ4*02     2    ----------------------------------------------------------------------------------------..  3

                                      ---------->                                
                                      Y  L  D  S  W  G  Q  G  N  L  V  T  V  S  S
                    Query_80     274  ACCTTGACTCCTGGGGCCAGGGAAACCTGGTCACCGTCTCCTC  316
J  93.3% (42/45)    IGHJ4*02     4    ..T......A..............C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_250167

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           249     2e-68
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGC	AACC	TCGGGGAG	GACTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACCTCGGGGAGGACTCCCTACTACTATTACGGAATGGACGTC	ATSGRTPYYYYGMDV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	23	4	0	85.2
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	12	9	0	57.1
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	239	2	2	0	0	100
Total	N/A	N/A	239	199	40	0	83.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  M  S  G  E  S  F  N  G  Y  S  W  T  W  V  R  Q  R  P  G  K  G  L  E 
                    Query_81     1    ACCCTGTCCCTCACCTGCGCGATGTCTGGTGAGTCCTTCAATGGATATTCTTGGACCTGGGTCCGCCAGCGCCCCGGGAAGGGACTGGAG  90
V  83.3% (199/239)  IGHV4-34*01  49   ....................TG.C.A.....G........G...T..C.AC....G....A.........C...A........G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  S  H  F  K  T  V  N  Y  N  P  T  L  L  G  R  V  N  I  S  I  D  T  S  K  N 
                    Query_81     91   TGGATTGCGGAAATCAGTCATTTTAAAACCGTTAATTACAACCCGACACTCTTGGGTCGAGTCAACATATCGATAGACACCTCCAAGAAC  180
V  83.3% (199/239)  IGHV4-34*01  139  .......G........A....AG.GG..G.ACC..C.........T.C...AA.A.........C......AG.......G.........  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  S  G  R  T  P  Y  Y  Y  Y 
                    Query_81     181  CACTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGCGCAACCTCGGGGAGGACTCCCTACTACTATTAC  270
V  83.3% (199/239)  IGHV4-34*01  229  ..G..........A.....G...........................G........T..-------------------------------  287
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (8/8)     IGHD3-10*01  14   ---------------------------------------------------------------........-------------------  21
J  96.6% (56/58)    IGHJ6*02     5    -----------------------------------------------------------------------------.........C...  17

                                      ----------->                                 
                                       G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_81     271  GGAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  315
J  96.6% (56/58)    IGHJ6*02     18   ..T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_250166

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGTCGTATTCTTT	TGATAGTAGTGGT	CAGAGTCCCGCG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGTCGTATTCTTTTGATAGTAGTGGTCAGAGTCCCGCGTACTTTGACTAC	ARDLSYSFDSSGQSPAYFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_82     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  C  I  S  G  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_82     91   AGTGGGTCTCATGCATCAGTGGTGGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  ............C...T...A..A..................................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  S  Y  S  F  D  
                    Query_82     181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGTCGTATTCTTTTGATA  270
V  98.4% (246/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD3-22*01  10   -------------------------------------------------------------------------------------.....  14

                                      R3-IMGT------------------------>                                  
                                      S  S  G  Q  S  P  A  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_82     271  GTAGTGGTCAGAGTCCCGCGTACTTTGACTACTGGGGCCAGGGGGCCCTGGTCACCGTCTCCTCAG  336
D  100.0% (13/13)   IGHD3-22*01  15   ........----------------------------------------------------------  22
J  95.7% (44/46)    IGHJ4*02     3    --------------------.......................AA.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_250165

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           318     6e-89
IGHD2-8*01                                                                                            19.9    0.16 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGAGGGTA	ATATTATACTTCTGATGTATGC	CCCGCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCGGAGGGTAATATTATACTTCTGATGTATGCCCCGCCTGACTTC	ARAEGNIILLMYAPPDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  R  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_83     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCGTTCAGTAGATACACCATGAACTGGGTCCGCCAGGCTCCTGGGAAGGGCCTGG  90
V  90.8% (226/249)  IGHV3-21*01  47   ...................................A.C........C..T.G........................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  D  S  N  T  I  Y  Y  T  D  S  V  K  G  R  F  S  I  S  R  D  N  A  
                    Query_83     91   AGTGGGTCTCATCTATTAGTGGCGATAGTAATACCATATACTACACAGACTCGGTGAAGGGCCGATTCAGCATCTCCAGAGACAACGCCA  180
V  90.8% (226/249)  IGHV3-21*01  137  .............C......A.TAG.....G.TA..........G.......A................C....................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  F  L  Q  M  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  E  G  N  I  I  L  
                    Query_83     181  AGAACTCACTGTTTCTTCAAATGCACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGCGAGCGGAGGGTAATATTATACTTC  270
V  90.8% (226/249)  IGHV3-21*01  227  ............A...G......A............................G............A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  81.8% (18/22)    IGHD2-8*01   4    ------------------------------------------------------------------------------.....G....AA  15

                                      GT-------------------->                                  
                                      L  M  Y  A  P  P  D  F  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_83     271  TGATGTATGCCCCGCCTGACTTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  327
D  81.8% (18/22)    IGHD2-8*01   16   ..G.......-----------------------------------------------  25
J  95.1% (39/41)    IGHJ4*02     8    ----------------.....A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_250164

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     3e-93
IGHD6-13*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATGGG	AGCAGCAGCTG	ATAAGGA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATGGGAGCAGCAGCTGATAAGGAAC	AREWEQQLIRN	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_84     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTGACTATAGCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   .....................................C......AG............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  S  G  S  R  Y  F  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  A  
                    Query_84     91   AGTGGGTCTCGGGCATTAGTAGCGGTAGTCGCTACTTTTACTACGCAGACTCAGTGAAGGGCCGATTCTCCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ..........ATC.........TA.....A.T...A.A..............................A.....................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  E  W  E  Q  Q  L  I  
                    Query_84     181  AGAACTCATTGTATTTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTGTATATTACTGTGCGAGAGAATGGGAGCAGCAGCTGATAA  270
V  92.4% (231/250)  IGHV3-21*01  227  ........C.....C.....................C...G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  7    ---------------------------------------------------------------------------...........----  17

                                      ---->                                  
                                      R  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_84     271  GGAACTGGGGCCAGGGAACCCTGGTCACCGTGTCCTCAG  309
J  97.2% (35/36)    IGHJ4*02     13   ---............................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_250163

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           272     2e-75
IGHD3-10*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGGACATGTTAG	GGTTCGGGGA	CTTGGTTCCCCTTGCCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACATGTTAGGGTTCGGGGACTTGGTTCCCCTTGCCCAC	ARDMLGFGDLVPLAH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	210	36	0	85.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  S  Y  A  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_85     1    GGTCCCTGAGACTCTCCTGTGCGGTCTCTGGATTCACCTTTTCCAGTTATGCCATCTCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  85.4% (210/246)  IGHV3-23*01  47   ......................A.C................AG...C........GAG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  G  D  S  A  A  K  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_85     91   AGTGGGTCTCTGGCATCGGTGACAGTGCTGCCAAGACATATTACGCAGACTCCGTGAGGGGCCGCTTCACCATCTCCAGAGACAATTCCA  180
V  85.4% (210/246)  IGHV3-23*01  137  ..........A.CT..TA...GT....G..GT.GC.....C................A......G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  M  T  V  Y  L  Q  M  N  S  L  R  P  E  D  T  G  M  Y  F  C  A  R  D  M  L  G  F  G  D  
                    Query_85     181  GAATGACAGTATATCTGCAAATGAACAGTCTGAGACCCGAGGACACGGGCATGTATTTCTGTGCGAGGGACATGTTAGGGTTCGGGGACT  270
V  85.4% (210/246)  IGHV3-23*01  227  AG.AC..GC.G.................C......G............C.G.A....A........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD3-10*01  11   ------------------------------------------------------------------------------..........--  20

                                      ---------------->                                  
                                      L  V  P  L  A  H  W  G  Q  G  V  L  V  S  V  S  S  
                    Query_85     271  TGGTTCCCCTTGCCCACTGGGGCCAGGGAGTCCTGGTCAGCGTCTCCTCAG  321
J  91.7% (33/36)    IGHJ4*02     13   ---------------..............AC........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_250162

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AGCCTTTCACA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGAAGCCTTTCACATTGACTAC	GREAFHIDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  R  S  S  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_86     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGAAGTTCTAGCATGACCTGGGTCCGCCAGGCTCCGGGGAAGGGACTGG  90
V  92.0% (230/250)  IGHV3-21*01  47   ....................................C......T..C.A........A..................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  N  S  A  S  N  F  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_86     91   AGTGGGTCTCATCCATTAATAGTGCTAGTAATTTCATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  92.0% (230/250)  IGHV3-21*01  137  ..................G....AG.....G..A....................................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  V  F  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  F  C  G  R  E  A  F  H  I  D  Y  
                    Query_86     181  AGAACTCAGTCTTTCTGCAGATGAGCAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGGGAGAGAAGCCTTTCACATTGACTACT  270
V  92.0% (230/250)  IGHV3-21*01  227  ........C.G.A......A....A................................A.....C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------------.........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_86     271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (42/42)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_99129

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           366     2e-103
IGHD2-21*02                                                                                           18.0    0.65  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACTG	GGTGGGGACTACTAT	GGTCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTC	VRRLGGDYYGPFEF	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	262	28	0	90.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  P  E  I  S  C  K  A  Y  G  Y  A  F  N  D  Y
                    Query_87     1    GCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCCGGGGAGTCTCCGGAGATCTCCTGTAAGGCTTATGGATACGCCTTTAACGACTA  90
V  90.3% (262/290)  IGHV5-51*01  6    ........................G......................T.A...............G..C.......AG.....C.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  E  K  G  L  D  W  M  G  V  I  Y  P  D  D  L  D  T  T  Y  S  P
                    Query_87     91   CTGGATCGGCTGGGTGCGCCAGAAGCCCGAGAAAGGCCTGGATTGGATGGGGGTCATCTATCCTGATGACCTTGATACGACATACAGTCC  180
V  90.3% (262/290)  IGHV5-51*01  96   .......................T.....G............G.........A............G....TC......C.G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  N  T  I  Y  L  R  W  S  S  L  K  A  S  D  T  A
                    Query_87     181  GTCCTTCCAAGGCCAGGTCACAATCTCAGTCGACAAGTCCATCAACACCATCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  90.3% (262/290)  IGHV5-51*01  186  .....................C.......C..............G....GC........A..............................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  V  R  R  L  G  G  D  Y  Y  G  P  F  E  F  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_87     271  CATGTATTATTGTGTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  359
V  90.3% (262/290)  IGHV5-51*01  276  .........C....C.....---------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                       
D  86.7% (13/15)    IGHD2-21*02  11   -------------------------.....T....G....-------------------------------------------------  25
J  93.0% (40/43)    IGHJ4*02     6    ----------------------------------------------.....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_99128

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD3-3*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGCCTCGTGCCTG	GGAGTGGTTAT	GAAGCCATACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGCCTCGTGCCTGGGAGTGGTTATGAAGCCATACCTGACTAC	AKSLVPGSGYEAIPDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         P  L  R  L  S  C  V  A  S  G  F  T  F  S  D  Y  Y  M  T  W  T  R  Q  A  P  G  K  G  L  
                    Query_88     1    GGCCCCTGAGACTCTCCTGTGTGGCCTCTGGATTCACCTTCAGTGACTACTACATGACATGGACCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.7% (225/248)  IGHV3-23*01  47   ..T..................CA.................T..CAG...TGC.....GC...GT..........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  D  S  G  G  D  T  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_88     91   AATGGGTCTCAGGTATTAGTGATAGTGGTGGTGACACATACTACGCAGACGCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  90.7% (225/248)  IGHV3-23*01  137  .G..........C........G..........AG................T.......................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  F  C  A  K  S  L  V  P  G  S  G  
                    Query_88     181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTATATTTCTGTGCGAAAAGCCTCGTGCCTGGGAGTGGTT  270
V  90.7% (225/248)  IGHV3-23*01  227  ...A................................C....................A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD3-3*01   15   ---------------------------------------------------------------------------------.........  23

                                      T------------------>                                
                                      Y  E  A  I  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_88     271  ATGAAGCCATACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  322
D  100.0% (11/11)   IGHD3-3*01   24   ..--------------------------------------------------  25
J  100.0% (39/39)   IGHJ4*02     8    -------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_333062

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            347     8e-98
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ4*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-19*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGGG	AGCAGTGGC	CGCTTCATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGGAGCAGTGGCCGCTTCATCATTGACTAC	ARGGSSGRFIIDY	285	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	71	69	66	3	0	95.7
CDR1-IMGT	72	95	24	21	3	0	87.5
FR2-IMGT	96	146	51	49	2	0	96.1
CDR2-IMGT	147	170	24	19	5	0	79.2
FR3-IMGT	171	284	114	93	21	0	81.6
CDR3-IMGT (germline)	285	292	8	8	0	0	100
Total	N/A	N/A	290	256	34	0	88.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  T  F  S  N  Y 
                    Query_89     3    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTCAGGCTTCTGGATACACCTTCAGCAATTAT  92
V  88.3% (256/290)  IGHV1-8*01   7    .................G.........................................CA.....................C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       E  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  I  N  P  K  G  G  H  T  G  Y  A  Q 
                    Query_89     93   GAAATCAATTGGGTGCGACAAGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATAAACCCTAAAGGTGGTCACACTGGCTATGCACAG  182
V  88.3% (256/290)  IGHV1-8*01   97   ..T.....C...........G...................................G........CA.....A....A............  186
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  S  T  I  G  S  N  G  T  A  Y  M  E  L  N  R  L  R  S  E  D  P  A 
                    Query_89     183  AAATTCCAGGGCAGAGTCACCATGAGCACTATTGGTTCAAACGGCACAGCCTACATGGAACTCAACAGGTTGCGATCTGAGGACCCGGCC  272
V  88.3% (256/290)  IGHV1-8*01   187  ..G......................C..GG.ACACC..C.TAA................G..G.G...CC..A...........A.....  276
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><--------------CDR3-IMGT-------------->                                 
                                       V  Y  Y  C  A  R  G  G  S  S  G  R  F  I  I  D  Y  W  G  H  G  S  L  V  T  V  S  S 
                    Query_89     273  GTCTATTACTGTGCGAGAGGCGGGAGCAGTGGCCGCTTCATCATTGACTACTGGGGCCACGGAAGCCTGGTCACCGTCTCCTCA  356
V  88.3% (256/290)  IGHV1-8*01   277  ..G.................----------------------------------------------------------------  296
                                       V  Y  Y  C  A  R  G                                                                
D  100.0% (9/9)     IGHD6-19*01  7    ------------------------.........---------------------------------------------------  15
J  95.1% (39/41)    IGHJ4*01     7    -------------------------------------------................A....C...................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_333063

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           277     9e-77
IGHD3-22*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAC	ATAGTACTGG	CCGAATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATAGTACTGGCCGAATCATTGACTAT	ARAHSTGRIIDY	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	22	8	0	73.3
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	100	14	0	87.7
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	213	36	0	85.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G  
                    Query_90     4    CCCTGAGACTCTCCTGTAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCAGGGAAGGGCC  93
V  85.5% (213/249)  IGHV4-31*02  50   .....TCC...A......C................A...G.A....TGG..A...C....G.............CA..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  M  G  Y  I  Y  H  V  E  S  T  S  R  N  P  S  L  K  S  Q  L  T  I  S  L  D  P  S  
                    Query_90     94   TGGAGTGGATGGGATACATCTATCACGTTGAGAGCACCTCCCGCAACCCGTCCCTCAAGAGTCAACTTACCATTTCACTCGACCCGTCTA  183
V  85.5% (213/249)  IGHV4-31*02  140  ..........T..G.........T..AG..G........A.TA....................G.G.......A...G.A...A......  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  S  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  S  T  G  R  I  
                    Query_90     184  AGAGCCAGTTCTCCCTAAAACTGACCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCACATAGTACTGGCCGAATCA  273
V  85.5% (213/249)  IGHV4-31*02  230  ...A............G..G....G....G.......................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-22*01  12   ------------------------------------------------------------------------......G...--------  21

                                      ------->                                  
                                      I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_90     274  TTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ4*02     7    .......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_87157

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         294     6e-82
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAC	TACTATGATAGTAGTGGTT	CGTACTCCGAATC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACTACTATGATAGTAGTGGTTCGTACTCCGAATCTGATGCTTTTGATATC	ARHYYDSSGSYSESDAFDI	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  E  V  S  G  F  T  F  S  S  F  G  F  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_91       1    GGTCCCTGAGACTCTCCTGTGAAGTCTCTGGATTCACCTTCAGTTCTTTTGGTTTCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  87.9% (218/248)  IGHV3-30-3*01  47   .....................C..C...................AGC.A..C.A.G..................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  L  I  S  F  D  G  D  N  R  L  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_91       91   AGTGGGTGGCTCTTATTTCTTTTGATGGAGACAACAGATTATACGCAGACTCCGTGAAGGGGCGATTCACCGTCTCGAGAGACAATTCCA  180
V  87.9% (218/248)  IGHV3-30-3*01  137  ..........AG....A..A.A.......AG...T.A..AC....................C.........A....C.............  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                        K  N  S  L  Y  L  Q  L  N  S  L  T  A  D  D  T  A  V  Y  Y  C  A  R  H  Y  Y  D  S  S  G  
                    Query_91       181  AGAACTCGCTCTATCTACAACTGAACAGCCTGACAGCTGACGACACGGCTGTCTATTACTGTGCGAGACACTACTATGATAGTAGTGGTT  270
V  87.9% (218/248)  IGHV3-30-3*01  227  .....A....G.....G...A............G......G...........G...............----------------------  294
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (19/19)   IGHD3-22*01    5    -----------------------------------------------------------------------...................  23

                                        -IMGT----------------------->                                
                                        S  Y  S  E  S  D  A  F  D  I  W  G  Q  G  T  L  V  T  V  S  S
                    Query_91       271  CGTACTCCGAATCTGATGCTTTTGATATCTGGGGCCAGGGGACACTAGTCACCGTCTCTTC  331
J  93.8% (45/48)    IGHJ3*02       1    -------------........................A......A.G..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_52882

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           333     1e-93
IGHD5-18*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACAAGGGGATAA	CTATAGTTAC	GAATCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACAAGGGGATAACTATAGTTACGAATCT	AQGDNYSYES	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	241	2	2	0	0	100
Total	N/A	N/A	241	227	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  W  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_92     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTTGGAACTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.2% (227/241)  IGHV3-53*01  47   ............................................A.C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  A  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  K  
                    Query_92     91   AGTGGGTCTCAGTCATTTATGCCGGTGGTAGCACATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  94.2% (227/241)  IGHV3-53*01  137  .............T......AG...............C..C........................................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------CDR3-IMGT---------> 
                                      K  V  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  Q  G  D  N  Y  S  Y  E  S  
                    Query_92     181  AAGTGTTGTATCTTCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCACAAGGGGATAACTATAGTTACGAATCTT  270
V  94.2% (227/241)  IGHV3-53*01  227  .CAC.C.............G.........................................-----------------------------  287
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  90.0% (9/10)     IGHD5-18*01  11   -------------------------------------------------------------------------....G.....-------  20
J  97.1% (33/34)    IGHJ4*02     15   -----------------------------------------------------------------------------------------.  15

                                                                       
                                      W  G  R  G  T  L  V  T  V  S  S  
                    Query_92     271  GGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  303
J  97.1% (33/34)    IGHJ4*02     16   ......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_55112

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGTCCCGACTGAACTACGGCATGGACGTC	ARLMSRLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  S  N  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_93     1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATCAGCAATTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G.........T.G................A............................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_93     91   TGGATTGAGTACATCTATTACAGGGGGAGTCCCAATAACGACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G...T...........T.....CA....CT..A..................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_93     181  CAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTAATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  .............A.C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  96.0% (48/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_93     271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  309
J  96.0% (48/50)    IGHJ6*02     24   ...................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_333067

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           355     3e-100
IGHD4-17*01                                                                                           27.6    8e-04 
IGHJ6*02                                                                                              106     3e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CGCAGA	ACTACGGTGACTAC	TTCGACCT	TTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCGCAGAACTACGGTGACTACTTCGACCTTTATTACTACTACTACGGTATGGACGTC	AKAQNYGDYFDLYYYYYGMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_94     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGCAGCTTTGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-23*01  47   ....................................C...........A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  N  S  G  G  R  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  V  N  S  
                    Query_94     91   AGTGGGTCTCAGGTATTAATAATAGTGGTGGTAGGACATACTACGTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGTCAATTCCA  180
V  95.6% (238/249)  IGHV3-23*01  137  ............C.....G.GG............C..........C...................................A........  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  A  Q  N  Y  G  D  Y  
                    Query_94     181  AGAACACGCTGTATCTCCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGCGCAGAACTACGGTGACTACT  270
V  95.6% (238/249)  IGHV3-23*01  227  ................G.................................G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (14/14)   IGHD4-17*01  3    ---------------------------------------------------------------------------..............-  16

                                      DR3-IMGT-------------------------->                                 
                                      F  D  L  Y  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_94     271  TCGACCTTTATTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  338
J  96.7% (59/61)    IGHJ6*02     2    -------...C.............................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_333065

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_95     1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  87.0% (214/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_95     91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCACCATCTCAGTAGACAAGTCCAAG  180
V  87.0% (214/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A................A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_95     181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  87.0% (214/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_95     271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTAGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  88.4% (38/43)    IGHJ4*02     6    ---.....C.A.............AC...G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_52885

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           321     7e-90
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCGTGCTGTTA	ACTATGATAGTGGTG	ATTCCGGTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CGTGCTGTTAACTATGATAGTGGTGATTCCGGTTGGTACTTTGACTAC	RAVNYDSGDSGWYFDY	237	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	235	113	109	4	0	96.5
Total	N/A	N/A	223	214	9	0	96


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  Y  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_96     13   GTGCAGCGTCTGGATACACTTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATAT  102
V  96.0% (214/223)  IGHV3-33*01  65   ...............T...C.......G..............................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      W  Y  D  G  S  E  K  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  S  K  R  T  L  Y  L  
                    Query_96     103  GGTATGATGGAAGTGAAAAATACTATGCAGACTCCTTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGCGCACACTGTATCTGC  192
V  96.0% (214/223)  IGHV3-33*01  155  ..............A.T..................G......................................AA...G..........  244
                                      W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  R  A  V  N  Y  D  S  G  D  S  G  W  Y  F  D  
                    Query_96     193  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGCCGTGCTGTTAACTATGATAGTGGTGATTCCGGTTGGTACTTTGACT  282
V  96.0% (214/223)  IGHV3-33*01  245  ...........................................-----------------------------------------------  287
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                                  
D  93.3% (14/15)    IGHD3-22*01  6    ------------------------------------------------------...........A...---------------------  20
J  100.0% (46/46)   IGHJ4*02     3    --------------------------------------------------------------------------------..........  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_96     283  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (46/46)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_333068

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           408     4e-116
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ4*02                                                                                              69.9    4e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATCCAACGGTC	GTGGGAGCCACT	CTCCCCTTTCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATCCAACGGTCGTGGGAGCCACTCTCCCCTTTCTCTTGACTTT	AKSNGRGSHSPLSLDF	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	274	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  S  G  E  S  L  K  I  S  C  E  A  S  G  Y  S  F  T  N  Y
                    Query_97     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGTCGGGGGAGTCTCTGAAGATCTCCTGTGAGGCTTCTGGGTACAGCTTTACCAATTA  90
V  95.5% (274/287)  IGHV5-51*03  6    ..............................A...C..........................A...G......A.............GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_97     91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGATTCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  95.5% (274/287)  IGHV5-51*03  96   ...................................................GA.....................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  A
                    Query_97     181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGCGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (274/287)  IGHV5-51*03  186  ...............G............................G...................A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        M  Y  F  C  A  K  S  N  G  R  G  S  H  S  P  L  S  L  D  F  W  G  Q  G  T  L  V  T  V  S
                    Query_97     271  CATGTATTTCTGTGCGAAATCCAACGGTCGTGGGAGCCACTCTCCCCTTTCTCTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTC  360
V  95.5% (274/287)  IGHV5-51*03  276  ........A........-------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                           
D  91.7% (11/12)    IGHD1-26*01  7    -----------------------------........T...-------------------------------------------------  18
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------------------------......AC.............................  43

                                           
                                        S  
                    Query_97     361  CTCAG  365
J  95.2% (40/42)    IGHJ4*02     44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_333069

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           363     1e-102
IGHD5-18*01                                                                                           31.5    5e-05 
IGHJ4*01                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGT	TGGATACAACTATGGTTAC	CCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTTGGATACAACTATGGTTACCCTCACTTTGACTAC	ARGVGYNYGYPHFDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	238	6	0	97.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_98     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.5% (238/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  F  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_98     91   TGGATTGGCTTTATCTATTACACTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGTGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.5% (238/244)  IGHV4-59*01  139  ........G.A...........G......C.............................A..............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  Y  N  Y  G  Y  P 
                    Query_98     181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGGTTGGATACAACTATGGTTACCCT  270
V  97.5% (238/244)  IGHV4-59*01  229  ................................T...............................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD5-18*01  2    --------------------------------------------------------------------........G..........---  20

                                      ----------->                                  
                                       H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_98     271  CACTTTGACTACTGGGGCCAAGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (45/45)   IGHJ4*01     4    -.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_87159

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           361     4e-102
IGHD4-17*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCACTACAACGTT	TACGGTGACTAC	GGCGT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCACTACAACGTTTACGGTGACTACGGCGTTGATGCTTTTGATATC	ARDHYNVYGDYGVDAFDI	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	238	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  T  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_99     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCACCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (238/245)  IGHV4-59*01  49   .................................T........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  A  K  N 
                    Query_99     91   TGGGTTGGGTATATCTATTACAGAGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGGCCAAGAAT  180
V  97.1% (238/245)  IGHV4-59*01  139  ...A...................T....G....................................................T.......C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  H  Y  N  V  Y  G  D  Y 
                    Query_99     181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCACTACAACGTTTACGGTGACTAC  270
V  97.1% (238/245)  IGHV4-59*01  229  ...................G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  5    ------------------------------------------------------------------------------............  16

                                      -------------------->                                  
                                       G  V  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_99     271  GGCGTTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  325
J  100.0% (50/50)   IGHJ3*02     1    -----..................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_87158

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           297     7e-83
IGHD3-9*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGACCCA	TACGGTATTTTG	GCTATTGAGAAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGTGACCCATACGGTATTTTGGCTATTGAGAAG	ATGDPYGILAIEK	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	42	9	0	82.4
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  N  Y  W  S  W  I  R  Q  S  P  A  K  G 
                    Query_100    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGCCAACTACTGGAGTTGGATCCGCCAATCCCCTGCAAAGGGC  90
V  88.0% (220/250)  IGHV4-31*03  49   .................................................GTT..........C...........GCA...A.GG......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  T  T  E  Y  N  P  S  L  K  S  R  L  T  M  S  I  D  P  S 
                    Query_100    91   CTCGAGTGGATTGGATACATCTATTATGGTGGGACCACCGAGTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCCATTGACCCGTCT  180
V  88.0% (220/250)  IGHV4-31*03  139  ..G...........G...........CA......G....T.C...........C............G.T.....A..AG.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       T  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  D  P  Y  G  I  L 
                    Query_100    181  ACGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGTGACCCATACGGTATTTTG  270
V  88.0% (220/250)  IGHV4-31*03  229  .A...................C...G...........................G.............G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD3-9*01   5    ------------------------------------------------------------------------------....A.......  16

                                      ----------->                                
                                       A  I  E  K  W  G  Q  G  T  L  V  T  V  S  S
                    Query_100    271  GCTATTGAGAAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
J  100.0% (32/32)   IGHJ4*02     15   ------------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_55118

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCCC	ARGVGNNWFDP	244	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_101    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_101    91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><------------CDR3-IMGT-----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_101    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  98.1% (51/52)    IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ------>                                  
                                       D  P  L  G  P  G  N  P  G  H  R  L  L   
                    Query_101    271  GACCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  311
J  98.1% (51/52)    IGHJ5*02     12   ......-..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_44089

Length=413
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           400     1e-113
IGHD2-15*01                                                                                           33.4    2e-05 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AG	ATTGCAGTGGTGGTAACTGCTAC	CAGACTCGACCTCACTTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGATTGCAGTGGTGGTAACTGCTACCAGACTCGACCTCACTTTTACTACTACGGTTTGGACGCC	AREDCSGGNCYQTRPHFYYYGLDA	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  L  T  S  Y 
                    Query_102    2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAGCTTGACCAGCTAC  91
V  94.1% (273/290)  IGHV1-18*04  7    ............................................................................C...T.........  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  S  G  N  S  D  Y  A  Q 
                    Query_102    92   GGTATCAACTGGGTGCGACAGGCCCCGGGACAAGGCCTTGAGTGGATGGGTTGGATCAGCGCATACAGTGGTAACTCCGACTATGCACAG  181
V  94.1% (273/290)  IGHV1-18*04  97   .......G..................T........G..............A...........T....A.......A.AA...........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  L  T  M  T  T  D  T  S  T  N  T  A  Y  M  E  L  R  R  L  R  S  D  D  T  A 
                    Query_102    182  AACCTCCAGGGCAGACTCACCATGACCACAGACACGTCCACGAACACAGCCTACATGGAACTGAGGAGGCTGAGATCTGACGACACGGCC  271
V  94.1% (273/290)  IGHV1-18*04  187  ..G............G...................A.......G...............G........C.....................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------------CDR3-IMGT------------------------------>      
                                       V  Y  Y  C  A  R  E  D  C  S  G  G  N  C  Y  Q  T  R  P  H  F  Y  Y  Y  G  L  D  A  W  G 
                    Query_102    272  GTGTATTACTGTGCGAGAGAAGATTGCAGTGGTGGTAACTGCTACCAGACTCGACCTCACTTTTACTACTACGGTTTGGACGCCTGGGGC  361
V  94.1% (273/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  91.3% (21/23)    IGHD2-15*01  6    ----------------------....T..........G.......---------------------------------------------  28
J  94.1% (48/51)    IGHJ6*02     9    ---------------------------------------------------------------............A......T.......  35

                                                              
                                       Q  G  T  T  V  T  V  S 
                    Query_102    362  CAGGGGACCACGGTCACCGTCTCC  385
J  94.1% (48/51)    IGHJ6*02     36   ..A.....................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40498920


Query= Query_54245

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           369     2e-104
IGHD4-17*01                                                                                           18.0    0.60  
IGHJ6*02                                                                                              106     3e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCA	ACGGTGACT	CGGAGGGATTTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAACGGTGACTCGGAGGGATTTGGCTACTACTACGGTATGGACGTC	ARGNGDSEGFGYYYGMDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  G  S  H  Y  W  S  W  I  R  Q  Y  P  G  K  G 
                    Query_103    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAACAGTGGTAGTCACTACTGGAGCTGGATCCGCCAGTACCCAGGGAAGGGC  90
V  97.2% (243/250)  IGHV4-31*01  49   ...............................G........G.......G..T.......................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 
                    Query_103    91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACGTCT  180
V  97.2% (243/250)  IGHV4-31*01  139  ..........................................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  N  Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  N  G  D  S  E  G 
                    Query_103    181  AAGAACCAGTTCTCCCTGAAGGTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCAACGGTGACTCGGAGGGA  270
V  97.2% (243/250)  IGHV4-31*01  229  .....................C...G............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD4-17*01  6    -------------------------------------------------------------------------.........--------  14

                                      -IMGT--------------------->                                 
                                       F  G  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_103    271  TTTGGCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
J  100.0% (55/55)   IGHJ6*02     8    -----.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_142780

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHD3-16*01                                                                                           10.3    116  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGACGAGGGGCA	GGGGG	CGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGACGAGGGGCAGGGGGCGGTTGACTCT	ARVDEGQGAVDS	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  K  V  S  G  G  S  I  T  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_104    1    ACCCTGTCCCTCACCTGCAAGGTCTCTGGGGGCTCCATCACGACTTACTACTGGAGTTGGATCCGACAGCCCCCAGGGAAGGGACTGGAG  90
V  92.2% (225/244)  IGHV4-59*01  49   ...................CT........T..........GT.G............C........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  V  N  R  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_104    91   TGGATTGGGTATATCTATTACACTGGCAGTGTCAACCGCAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*01  139  ......................G...G..CAC....TA..............................A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  D  E  G  Q  G  A  V  D 
                    Query_104    181  CAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTTGACGAGGGGCAGGGGGCGGTTGAC  270
V  92.2% (225/244)  IGHV4-59*01  229  ...............C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -----------------------------------------------------------------------------.....--------  22
J  92.9% (39/42)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_104    271  TCTTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  307
J  92.9% (39/42)    IGHJ4*02     12   .AC.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_54247

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           361     4e-102
IGHD6-13*01                                                                                           14.1    8.2   
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGGGATTC	ATAGCAACAG	AGGG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGGGATTCATAGCAACAGAGGGCGGTATGGACGTC	ARWGFIATEGGMDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	237	6	0	97.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_105    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  97.5% (237/243)  IGHV4-59*01  49   ..........................................................................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_105    91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACCTCCAAGAAC  180
V  97.5% (237/243)  IGHV4-59*01  139  ................................................................................G.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  L  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  W  G  F  I  A  T  E  G  G 
                    Query_105    181  CAGTTGTCCCTGAAAGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATGGGGATTCATAGCAACAGAGGGCGGT  270
V  97.5% (237/243)  IGHV4-59*01  229  .....C........GC....C..........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD6-13*01  5    ------------------------------------------------------------------------......G...--------  14
J  100.0% (46/46)   IGHJ6*02     17   --------------------------------------------------------------------------------------....  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_105    271  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  312
J  100.0% (46/46)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_334590

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     5e-95
IGHD5-12*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCTCTGGTGGAGGGCGTGACA	GATATAGTGGCTACGAT	GGACCTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCTCTGGTGGAGGGCGTGACAGATATAGTGGCTACGATGGACCTTATGACTAT	AKDRSGGGRDRYSGYDGPYDY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  I  S  V  Y  A  M  S  W  V  R  Q  A  P  G  K  G  P  
                    Query_106    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCATTAGCGTCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  93.2% (233/250)  IGHV3-23*01  47   ....................................C.T.....AG.........................................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  S  S  G  T  G  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  T  S  
                    Query_106    91   AGTGGGTCTCAGCTATTAGTAGTAGTGGAACTGGCACATACTACGCGGACTCTGTGAAGGGCCGGTTCACCGTCTCCAGAGACACTTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  ....................G.......TGG.A.............A.....C..................A............A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  R  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  R  S  G  G  G  R  
                    Query_106    181  AGAACACGCTGTATCTGCAAATGAACAGACTGAGAGCCGACGACACGGCCGTTTATTACTGTGCGAAAGATCGCTCTGGTGGAGGGCGTG  270
V  93.2% (233/250)  IGHV3-23*01  227  ............................C...........G...........A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      DR3-IMGT-------------------------->                                  
                                      D  R  Y  S  G  Y  D  G  P  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_106    271  ACAGATATAGTGGCTACGATGGACCTTATGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  100.0% (17/17)   IGHD5-12*01  4    ---.................-------------------------------------------------  20
J  97.6% (40/41)    IGHJ4*02     8    ----------------------------......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_142785

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           349     2e-98
IGHD3-16*02                                                                                           52.6    2e-11
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AG	ATTATGATTACGTTTGGGGGAGTTATC	TCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGATTATGATTACGTTTGGGGGAGTTATCTCCACTAC	AREDYDYVWGSYLHY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  F  D  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_107    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCGACAGTACTTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*02  49   ..................................C..T.....G...C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N  Y  S  G  S  T  N  Y  N  P  P  L  K  S  R  V  T  I  S  E  D  T  S  K  N 
                    Query_107    91   TGGATTGGATATATTAATTACAGTGGGAGCACCAACTACAACCCCCCCCTCAAGAGTCGAGTCACCATATCAGAAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*02  139  ........G.....CT.............................T...........................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  E  D  Y  D  Y  V  W  G  S 
                    Query_107    181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTGTACTACTGTGCGAGAGAAGATTATGATTACGTTTGGGGGAGT  270
V  95.5% (234/245)  IGHV4-59*02  229  .......................................A..........T..............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (27/27)   IGHD3-16*02  3    -------------------------------------------------------------------.......................  25

                                      ----------->                                  
                                       Y  L  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_107    271  TATCTCCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (27/27)   IGHD3-16*02  26   ....------------------------------------------  29
J  100.0% (39/39)   IGHJ4*02     10   -------.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_54240

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           375     3e-106
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_108    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.0% (245/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  C  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_108    91   CTGGAGTGGATTGGGAACATCTTTTACTGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.0% (245/250)  IGHV4-31*03  139  ...............T......A....A......................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_108    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.0% (245/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_108    271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_142787

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           305     3e-85
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TCGGGA	TGGCTACAATT	TTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATCGGGATGGCTACAATTTTCTTGACTCC	ARDRDGYNFLDS	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	43	8	0	84.3
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	223	28	0	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  L  I  N  G  G  N  Y  W  S  W  I  R  Q  R  P  G  K  E 
                    Query_109    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCCTCATCAATGGCGGTAACTACTGGAGTTGGATCCGCCAGCGCCCGGGGAAGGAG  90
V  88.8% (223/251)  IGHV4-31*03  49   ...............................G....A...G..G...T...T..........C.............A...A.......GC  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  T  Y  Y  S  G  K  T  Q  Y  N  P  S  L  K  G  R  L  T  I  S  P  D  T  S 
                    Query_109    91   TTGGAGTGGATTGGCTATACCTATTACAGTGGGAAGACCCAGTACAACCCGTCCCTCAAGGGTCGACTCACCATATCACCTGACACGTCT  180
V  88.8% (223/251)  IGHV4-31*03  139  C.............G..C.T..............GC...T.C..................A.....G.T.........GTA.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  D  R  D  G  Y  N  F 
                    Query_109    181  AAGAACCAGTTCTCCCTGAAGCTGAGTTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGATCGGGATGGCTACAATTTT  270
V  88.8% (223/251)  IGHV4-31*03  229  ..........................C...............................A.........A..-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD5-12*01  11   -----------------------------------------------------------------------------.......G...--  21

                                      -------->                                  
                                       L  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_109    271  CTTGACTCCTGGGGCCAGGGGATCCTGGTCACCGTCTCCTCAG  313
J  92.9% (39/42)    IGHJ4*02     7    -......A............A.C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_142786

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     5e-96
IGHD6-19*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAGATATCTCC	TAGCAGTGGCTGGT	CAACACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGATATCTCCTAGCAGTGGCTGGTCAACACCTCTATTTGACTAC	ARQISPSSGWSTPLFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  T  Y  T  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_110    1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTACCTATACCATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (233/248)  IGHV3-21*01  47   ....................G........................G.....G....A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  S  F  I  N  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_110    91   AGTGGGTCTCATCCATCAGTAGTAGAGGTAGTTTCATAAATTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (233/248)  IGHV3-21*01  137  ................T........TA......A....T.C............G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  I  S  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  S  S  G  
                    Query_110    181  AGAACTCACTGTATCTGCAAATAAGCAGCCTGAGAGGCGAGGACACGGCTGTTTATTACTGTGCGAGACAGATATCTCCTAGCAGTGGCT  270
V  94.0% (233/248)  IGHV3-21*01  227  ......................G.A...........C...............G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD6-19*01  6    -------------------------------------------------------------------------------...........  16

                                      GT-------------------->                                  
                                      W  S  T  P  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_110    271  GGTCAACACCTCTATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  327
D  100.0% (14/14)   IGHD6-19*01  17   ...------------------------------------------------------  19
J  97.7% (42/43)    IGHJ4*02     6    --------------......................................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_142789

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           330     1e-92
IGHD1-1*01                                                                                            12.2    34   
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCAGGAT	GTACAA	GTGCCAGGTGATCTGCGGATATCCTTCTG	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAGATCAGGATGTACAAGTGCCAGGTGATCTGCGGATATCCTTCTGCGGTTTGGACGTC	AADQDVQVPGDLRISFCGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	231	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  A  T  D  L  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_111    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCGCCACTGATCTTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  92.0% (231/251)  IGHV4-61*01  49   .......................................AG..G..G.AG........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  L  Y  Y  N  G  V  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  R  D  T  S 
                    Query_111    91   CTGGAGTGGATTGGATATCTCTATTACAATGGGGTCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAAGAGACACGTCC  180
V  92.0% (231/251)  IGHV4-61*01  139  ..............G...A.........G....AG...........................................GT..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  M  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  A  D  Q  D  V  Q  V  P 
                    Query_111    181  AAGAACCAGTTCTCCCTGAAGATGAACTCTGTGACCGCTGCGGACTCGGCCGTATATTATTGTGCGGCAGATCAGGATGTACAAGTGCCA  270
V  92.0% (231/251)  IGHV4-61*01  229  .....................C...G...................A.......G.....C......AG...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-1*01   2    ------------------------------------------------------------------------------......------  7

                                      CDR3-IMGT-------------------------->                                
                                       G  D  L  R  I  S  F  C  G  L  D  V  W  G  L  G  T  P  V  P  V  S  S
                    Query_111    271  GGTGATCTGCGGATATCCTTCTGCGGTTTGGACGTCTGGGGCCTAGGGACCCCGGTCCCCGTCTCCTC  338
J  91.1% (41/45)    IGHJ6*02     17   -----------------------....A...............A.......A.....A..........  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_142788

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           343     2e-96
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CAC	TATTCCTATGGTTCGGGGAGT	GC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACACTATTCCTATGGTTCGGGGAGTGCTTGACTTT	AKDTIPMVRGVLDF	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	126	24	22	2	0	91.7
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  I  T  F  S  S  H  A  M  S  W  A  R  Q  A  P  G  K  G  L  E  
                    Query_112    2    CCCTGTCCCTCACCTGCGCAGCCTCTGGAATCACCTTTAGCAGCCATGCCATGAGCTGGGCCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  94.3% (233/247)  IGHV3-23*01  50   .....AGA...T....T............T..............T...............T.............................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  A  I  S  G  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_112    92   GGGTCTCAGCTATTAGTGGTAGTGGTGGCACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCAAGA  181
V  94.3% (233/247)  IGHV3-23*01  140  ............................T.G...................................................T.......  229
                                      W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  H  M  S  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  D  T  I  P  M  V  R  G  
                    Query_112    182  ACACGCTGTATCTGCACATGAGCAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGACACTATTCCTATGGTTCGGGGAG  271
V  94.3% (233/247)  IGHV3-23*01  230  ................A....A.........................G...................-----------------------  296
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                          
D  95.2% (20/21)    IGHD3-10*01  2    ----------------------------------------------------------------------....A...............  21

                                      ---------->                                  
                                      V  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_112    272  TGCTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  95.2% (20/21)    IGHD3-10*01  22   .--------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    ---......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_334599

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           341     5e-96
IGHD4-17*01                                                                                           12.2    32   
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGAAGAAAG	TACGGT	CA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATGGGAAGAAAGTACGGTCAGATGCTTTTGATATA	VRDGKKVRSDAFDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  G  S  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_113    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTGGTTCCTGGATGCACTGGGTCCGCCAAGCTCCTGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-74*01  47   ...................................A........A.C.A...........................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  G  D  G  S  G  T  N  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_113    91   TGTGGGTCTCACGTATTAATGGTGATGGGAGTGGCACAAACTACGCGGAATCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCC  180
V  93.6% (234/250)  IGHV3-74*01  137  ....................A...........A......G.........C.......................................A  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      Q  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  R  D  G  K  K  V  R  S  
                    Query_113    181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGATGACACGGCTGTATACTACTGTGTCAGAGATGGGAAGAAAGTACGGTCAG  270
V  93.6% (234/250)  IGHV3-74*01  227  .......G................................G...........G..T.......CA.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD4-17*01  5    ---------------------------------------------------------------------------------......---  10
J  97.9% (46/47)    IGHJ3*02     2    -----------------------------------------------------------------------------------------.  2

                                      ------------->                                
                                      D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S
                    Query_113    271  ATGCTTTTGATATATGGGGCCAAGGGACAATGGTCACCGTCTCTTC  316
J  97.9% (46/47)    IGHJ3*02     3    .............C................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_334598

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           260     1e-71
IGHD3-10*01                                                                                           37.2    9e-07
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TCAGACG	ATGGTTCGGGGAGTTATTA	ATGGTGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATCAGACGATGGTTCGGGGAGTTATTAATGGTGTTTTTGATGTC	ARDQTMVRGVINGVFDV	224	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	7	2	2	0	0	100
CDR1-IMGT	8	37	30	22	8	0	73.3
FR2-IMGT	38	88	51	43	8	0	84.3
CDR2-IMGT	89	109	21	18	3	0	85.7
FR3-IMGT	110	223	114	104	10	0	91.2
CDR3-IMGT (germline)	224	231	8	7	1	0	87.5
Total	N/A	N/A	226	196	30	0	86.7


Alignments

                                        <----------CDR1-IMGT---------><--------------------FR2-IMGT---------------------><-----C
                                         G  E  A  L  I  N  G  G  N  Y  W  S  W  I  R  Q  R  P  G  K  E  L  E  W  I  G  Y  T  Y  
                    Query_114    6    CTGGTGAAGCCCTCATCAATGGCGGTAACTACTGGAGTTGGATCCGCCAGCGCCCGGGGAAGGAGTTGGAGTGGATTGGCTATACCTATT  95
V  86.7% (196/226)  IGHV4-31*02  74   ......GCT..A...G..G...T...T..........C.............A...A.......GCC.............G..C.T.....  163
                                         G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  L  E  W  I  G  Y  I  Y  

                                      DR2-IMGT-----><----------------------------------------------------FR3-IMGT---------------
                                      Y  S  G  K  T  Q  Y  N  P  S  L  K  G  R  L  T  I  S  P  D  T  S  K  N  Q  F  S  L  K  L  
                    Query_114    96   ACAGTGGGAAGACCCAGTACAACCCGTCCCTCAAGGGTCGACTCACCATATCACCTGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGA  185
V  86.7% (196/226)  IGHV4-31*02  164  .........GC...T.C..................A.....G.T.........GTA..................................  253
                                      Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  

                                      -------------------------------------><--------------------CDR3-IMGT--------------------> 
                                      S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  D  Q  T  M  V  R  G  V  I  N  G  V  F  D  V  
                    Query_114    186  GTTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGATCAGACGATGGTTCGGGGAGTTATTAATGGTGTTTTTGATGTCT  275
V  86.7% (196/226)  IGHV4-31*02  254  .C...............................A.........A..--------------------------------------------  299
                                      S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                                               
D  100.0% (19/19)   IGHD3-10*01  9    -----------------------------------------------------...................------------------  27
J  100.0% (44/44)   IGHJ3*01     7    -------------------------------------------------------------------------------...........  17

                                                                       
                                      W  G  Q  G  T  M  V  T  V  S  S  
                    Query_114    276  GGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  308
J  100.0% (44/44)   IGHJ3*01     18   .................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_54249

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           276     3e-76
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	18	8	0	69.2
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	210	34	0	86.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E  
                    Query_115    4    CCCTGAGACTCTCCTGTGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAGT  93
V  86.1% (210/244)  IGHV4-34*01  50   .....TCC...A....C.....CTA..G..G......C.................C...A.C....................G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K  
                    Query_115    94   GGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAAC  183
V  86.1% (210/244)  IGHV4-34*01  140  ...............A............CA.C.AC......C..T......A...............A....................C.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W  
                    Query_115    184  AAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGT  273
V  86.1% (210/244)  IGHV4-34*01  230  .GT...........C..A......T.....................G.....C......A....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------......-------------------  18
J  98.0% (49/50)    IGHJ5*02     2    ----------------------------------------------------------------------------------........  9

                                      ------->                                  
                                      F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_115    274  TCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  315
J  98.0% (49/50)    IGHJ5*02     10   ......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_54248

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTA	ACGATTT	ACATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACGATTTACATTATGGTATGGACGTC	ARVNDLHYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  Y  P  G  K  G 
                    Query_116    1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATTCGCCAGTACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ...................C................................................C......C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  V  G  Y  M  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_116    91   CTGGAGTGGGTTGGGTACATGTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  .........A..........C.....................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  D  L  H  Y  G 
                    Query_116    181  AAGAACCAGCTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTTAACGATTTACATTATGGT  270
V  97.6% (244/250)  IGHV4-31*03  229  .........T............................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   6    -------------------------------------------------------------------------.......----------  12
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_116    271  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  312
J  100.0% (45/45)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_332335

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           294     7e-82
IGHD3-22*01                                                                                           14.1    8.8  
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGCCTGC	AGTAGTAATTACT	GTTATGACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGCCTGCAGTAGTAATTACTGTTATGACGACTACTTCTACGGTATGGACGTC	ARVACSSNYCYDDYFYGMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	96	18	0	84.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  T  G  N  Y  Y  W  T  W  I  R  Q  R  P  E  K  G 
                    Query_117    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAACACTGGCAATTACTACTGGACCTGGATCCGCCAGCGCCCAGAGAAGGGC  90
V  87.6% (219/250)  IGHV4-31*03  49   ...............................G........G..G...TGG...........G..............A.....G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  N  G  I  T  Y  Y  S  P  S  L  R  G  R  I  A  I  S  V  D  R  S 
                    Query_117    91   CTGGAGTGGATTGGATACATATATTACAATGGGATCACCTACTACAGCCCGTCCCTCCGGGGGCGAATTGCCATATCAGTAGACAGGTCT  180
V  87.6% (219/250)  IGHV4-31*03  139  ..............G.....C.......G.....G...........A..........AA.A.T...G..A...............C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  K  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  G  T  Y  Y  C  A  R  V  A  C  S  S  N  Y 
                    Query_117    181  AAGAAACAATTCTCATTGAGGCTGAGCTCCGTGACTGCCGCGGACACGGGCACTTATTACTGTGCGAGAGTCGCCTGCAGTAGTAATTAC  270
V  87.6% (219/250)  IGHV4-31*03  229  .....C..G.....CC...A.........T...................C.GTG................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  84.6% (11/13)    IGHD3-22*01  17   ------------------------------------------------------------------------------...G..T.....  28

                                      DR3-IMGT------------------------>                                 
                                       C  Y  D  D  Y  F  Y  G  M  D  V  W  G  P  G  T  T  V  T  V  S  S 
                    Query_117    271  TGTTATGACGACTACTTCTACGGTATGGACGTCTGGGGCCCAGGGACCACGGTCACCGTCTCCTCA  336
D  84.6% (11/13)    IGHD3-22*01  29   .-----------------------------------------------------------------  29
J  96.4% (54/56)    IGHJ6*02     7    ----------......A.......................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_7200

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           313     2e-87
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGGTGGACGCC	GGGHRVSNGWGTYYNYGVDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	44	7	0	86.3
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	6	2	0	75
Total	N/A	N/A	274	239	29	6	87.2


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_118    1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  87.2% (239/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  R  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_118    91   GCCGCCAGCCACCAAGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  87.2% (239/274)  IGHV4-34*01  110  T.........C...G.......G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  G  
                    Query_118    181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGGGG  270
V  87.2% (239/274)  IGHV4-34*01  200  .......A...................................GC............C........................C....C.A  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      G  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  V  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_118    271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGGTGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  87.2% (239/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  89.6% (43/48)    IGHJ6*02     15   -----------------------------------------.....TA......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_332334

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           353     9e-100
IGHD2-15*01                                                                                           12.2    32    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAT	TAGCTG	TATCCGCGCCCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTAGCTGTATCCGCGCCCTACTACTTTGACTAC	ARRLAVSAPYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  T  N  S  N  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_119    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCACCAATAGTAATTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.2% (238/250)  IGHV4-39*01  49   ...............................G........G..G.....G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_119    91   CTGGAGTGGATTGCGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  95.2% (238/250)  IGHV4-39*01  139  .............G..................................................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  V  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  R  L  A  V  S  A  P 
                    Query_119    181  AAGAACCAGTTCTCCCTGAGGGTGACCTCTGTGACCGCCGCAGACACGGCTCTATATTACTGTGCGAGACGATTAGCTGTATCCGCGCCC  270
V  95.2% (238/250)  IGHV4-39*01  229  ...................A.C...G.........................G.G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-15*01  19   -------------------------------------------------------------------------......-----------  24

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  S  L  V  A  V  S  S  
                    Query_119    271  TACTACTTTGACTACTGGGGCCAGGGATCCCTGGTCGCCGTCTCCTCAG  319
J  95.8% (46/48)    IGHJ4*02     1    -..........................A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_102653

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            319     2e-89
IGHD5-18*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	N/A	TGGATACAACTATGG	GAGTGTCCCGGCGGGCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTGGATACAACTATGGGAGTGTCCCGGCGGGCATTGACTAC	AGYNYGSVPAGIDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	102	12	0	89.5
CDR3-IMGT (germline)	241	242	2	2	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  V  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_120    1    ACCCTGTCCCTCACCTGCGCTGTTTCTGGTGTCTCCATCAGTAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  92.1% (223/242)  IGHV4-4*02   49   .......................C.......G.........C................................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  M  Y  H  G  G  T  T  N  Y  K  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K 
                    Query_120    91   GAGTGGATTGGGGAAATGTACCATGGTGGGACCACCAACTACAAGCCGTCCCTCAAGAGTCGGGTCTCCATATCCGTGGACACGTCCAAG  180
V  92.1% (223/242)  IGHV4-4*02   139  .................C..T...A......G............C.................A...A.......A..A....A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  V  A  A  A  D  T  A  I  Y  Y  C  A  G  Y  N  Y  G  S  V  P  A 
                    Query_120    181  AACCAGTTCTCCCTGACGCTGACCTCTGTGGCCGCCGCGGACACGGCCATTTATTATTGTGCTGGATACAACTATGGGAGTGTCCCGGCG  270
V  92.1% (223/242)  IGHV4-4*02   229  ................A.....G.......A.................G.G.....C.....----------------------------  290
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  93.3% (14/15)    IGHD5-18*01  2    --------------------------------------------------------------........G......-------------  16

                                      ----------->                                  
                                       G  I  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_120    271  GGCATTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  316
J  97.6% (41/42)    IGHJ4*02     7    ----....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_102652

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD3-16*01                                                                                           12.2    35    
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTTGAGG	GATTAC	CAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTAC	ARSLRDYQPFYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_121    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  98.3% (284/289)  IGHV5-51*03  6    .............................................................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  A  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_121    91   CTGGATCGGCTGGGCGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ..............T...........................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_121    181  GTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACTGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ......................A................................................................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  S  L  R  D  Y  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_121    271  CATGTATTACTGTGCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  359
V  98.3% (284/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  8    ----------------------------......-------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ------------------------------------------....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_102650

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           367     6e-104
IGHD2-2*01                                                                                            43.0    2e-08 
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAACTTAGTC	TATTGTAGTAGGACCAGCTGCTATG	TCCCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAACTTAGTCTATTGTAGTAGGACCAGCTGCTATGTCCCATACTTTGACTAC	ARNLVYCSRTSCYVPYFDY	246	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	113	1	0	99.1
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	241	6	0	97.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_122    4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  97.6% (241/247)  IGHV4-31*02  50   .....TCC...A..............................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_122    94   TGGAGTGGATTGGCTACATCTATTACAGTGGGAGCACCTACTACAATCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  97.6% (241/247)  IGHV4-31*02  140  .............G................................C...........................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  N  L  V  Y  C  S  R  
                    Query_122    184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGAACTTAGTCTATTGTAGTAGGA  273
V  97.6% (241/247)  IGHV4-31*02  230  ...................................................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  96.0% (24/25)    IGHD2-2*01   5    -----------------------------------------------------------------------------...........T.  17

                                      -IMGT----------------------->                                  
                                      T  S  C  Y  V  P  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_122    274  CCAGCTGCTATGTCCCATACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  96.0% (24/25)    IGHD2-2*01   18   ............---------------------------------------------------  29
J  100.0% (46/46)   IGHJ4*02     3    -----------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_13099

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         283     1e-78
IGHD3-9*01                                                                                            14.1    8.7  
IGHJ2*01                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGACCGATAC	TGACTGG	GGTGGTCACACAGGGCTCTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACCGATACTGACTGGGGTGGTCACACAGGGCTCTTCTGGTACTTCGATCTC	AKTDTDWGGHTGLFWYFDL	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	56	27	25	2	0	92.6
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	14	7	0	66.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	243	212	31	0	87.2


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  R  L  S  C  V  V  S  G  Y  S  I  N  N  G  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  L  
                    Query_123      4    CCCTGAGACTCTCCTGTGTTGTGTCTGGTTACTCCATCAACAATGGTTACTACTGGGGCTGGCTCCGGCAGCCCCCAGGAAAGGGGCTGG  93
V  87.2% (212/243)  IGHV4-38-2*01  50   .....TCC...A....C.C...C................G..G...................A................G..........  139
                                           L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  G  S  V  Y  H  R  G  D  A  Y  Y  N  P  S  L  K  S  R  V  T  V  S  M  D  T  S  S  
                    Query_123      94   AGTGGATTGGGAGTGTCTATCATCGCGGGGACGCGTACTACAATCCGTCCCTCAAGAGTCGAGTCACCGTCTCAATGGACACGTCCAGTA  183
V  87.2% (212/243)  IGHV4-38-2*01  140  ..............A........A.T...AG.A.C........C........................A.A...G.A..........AG.  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><-----------------------CDR3-IM
                                        N  Q  V  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  T  D  T  D  W  G  G  H  
                    Query_123      184  ATCAGGTCTCCCTGAGCCTGAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAAGACCGATACTGACTGGGGTGGTCACA  273
V  87.2% (212/243)  IGHV4-38-2*01  230  .C...T.........AG.....C...............................A........---------------------------  292
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                             
D  100.0% (7/7)     IGHD3-9*01     15   -------------------------------------------------------------------------.......----------  21

                                        GT----------------------->                                  
                                        T  G  L  F  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_123      274  CAGGGCTCTTCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  333
J  100.0% (50/50)   IGHJ2*01       4    ----------..................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_102656

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         399     3e-113
IGHD2-2*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATCGTCCGG	GCTATGCC	CAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTCCGGGCTATGCCCAATACTACTTTACCTAT	ARDRPGYAQYYFTY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  D  S  F  T  N  S
                    Query_124      1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGAGACAGCTTCACCAACTC  90
V  94.1% (272/289)  IGHV5-10-1*01  6    .........................................................................T.......T....G..A  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  L  P  G  K  G  L  E  W  M  G  K  I  D  P  S  D  S  Y  T  I  H  S  P
                    Query_124      91   CTGGATCAGTTGGGTGCGCCAATTGCCCGGGAAAGGCCTGGAGTGGATGGGGAAGATTGATCCTAGTGACTCTTATACCATCCACAGTCC  180
V  94.1% (272/289)  IGHV5-10-1*01  96   .........C...........GA..............................G..........................A.T....C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  L  N  T  A  Y  L  L  W  S  S  L  T  A  S  D  T  A
                    Query_124      181  GTCCTTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCCTCAACACTGCCTACTTGCTGTGGAGCAGCCTGACGGCCTCGGACACCGC  270
V  94.1% (272/289)  IGHV5-10-1*01  186  ........................................A...G..........C...A..............A...............  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------CDR3-IMGT--------------->                                  
                                          I  Y  Y  C  A  R  D  R  P  G  Y  A  Q  Y  Y  F  T  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_124      271  CATTTATTACTGTGCGAGAGATCGTCCGGGCTATGCCCAATACTACTTTACCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  94.1% (272/289)  IGHV5-10-1*01  276  ...G...............----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                       
D  100.0% (8/8)     IGHD2-2*01     24   -----------------------------........----------------------------------------------------  31
J  93.8% (45/48)    IGHJ4*02       1    -----------------------------------------........GA...C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_102655

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            294     6e-82
IGHD1-26*01                                                                                           10.3    119  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAACTTTCGCGACATAT	GAGCT	CCA	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAACTTTCGCGACATATGAGCTCCATATGGACGTC	AKTFATYELHMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	98	16	0	86
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	216	28	0	88.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  H  N  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_125    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTCATAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGTAAGGGCCTG  90
V  88.5% (216/244)  IGHV4-4*02   49   ..................G.................A........AG...........G.....................G.....G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  N  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  M  S  M  A  K  L  K 
                    Query_125    91   GAGTGGATTGGAGAAATCTATCATAACGGCAACACCAACTACAACCCGTCCCTCCAGAGTCGGGTCACCATGTCAATGGCCAAGTTGAAG  180
V  88.5% (216/244)  IGHV4-4*02   139  ...........G.............GT..G.G......................A.......A........A...G.A.A.....CC...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  F  F  L  K  L  N  D  A  T  A  A  D  T  A  V  Y  Y  C  A  K  T  F  A  T  Y  E  L  H 
                    Query_125    181  AATCAGTTCTTCCTGAAACTGAACGATGCGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAAAACTTTCGCGACATATGAGCTCCAT  270
V  88.5% (216/244)  IGHV4-4*02   229  ..C.......C......G....G.TC..T.....................G.............--------------------------  292
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (5/5)     IGHD1-26*01  11   ---------------------------------------------------------------------------------.....----  15
J  97.7% (42/43)    IGHJ6*02     20   -----------------------------------------------------------------------------------------.  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_125    271  ATGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  312
J  97.7% (42/43)    IGHJ6*02     21   ...............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_102654

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            385     5e-109
IGHD3-9*01                                                                                            35.3    4e-06 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	ATTACGATATCTTGACTGGTAATT	GGGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCATTACGATATCTTGACTGGTAATTGGGCGTTTGATTAC	ARDHYDILTGNWAFDY	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	74	1	0	98.7
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	18	6	0	75
FR3-IMGT	178	291	114	103	11	0	90.4
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	271	25	0	91.6


Alignments

                                     <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S 
                    Query_126   4    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACTTTCAGC  93
V  91.6% (271/296)  IGHV1-2*04  1    .......................G...........................................................C....C.  90
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                     GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                      D  Y  Y  T  H  W  V  R  Q  G  P  G  P  G  L  E  W  M  G  W  I  N  P  R  T  G  D  T  N  Y 
                    Query_126   94   GACTACTATACCCACTGGGTGCGACAGGGCCCTGGACCAGGGCTTGAGTGGATGGGATGGATCAACCCTCGGACTGGAGACACAAATTAT  183
V  91.6% (271/296)  IGHV1-2*04  91   .G........TG................C........A...............................AAC.G...T.G......C...  180
                                      G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                     -----------------------------------------------FR3-IMGT-----------------------------------
                                      A  Q  R  F  Q  G  W  V  T  M  S  R  D  T  S  T  T  T  V  Y  M  D  L  S  R  L  K  S  D  D 
                    Query_126   184  GCACAGAGGTTTCAGGGCTGGGTCACCATGTCTAGGGACACGTCCACCACCACAGTTTACATGGACCTGAGCAGGCTGAAATCTGACGAC  273
V  91.6% (271/296)  IGHV1-2*04  181  .......A......................A.C.............T..G.....CC........G.............G..........  270
                                      A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                     -----------------><-------------------CDR3-IMGT------------------>                        
                                      T  A  V  Y  Y  C  A  R  D  H  Y  D  I  L  T  G  N  W  A  F  D  Y  W  G  Q  G  T  L  L  T 
                    Query_126   274  ACGGCCGTTTATTACTGTGCGAGAGATCATTACGATATCTTGACTGGTAATTGGGCGTTTGATTACTGGGGCCAGGGAACCCTGCTCACC  363
V  91.6% (271/296)  IGHV1-2*04  271  ........G.................----------------------------------------------------------------  296
                                      T  A  V  Y  Y  C  A  R                                                                   
D  91.7% (22/24)    IGHD3-9*01  3    ----------------------------..........T.........T...--------------------------------------  26
J  95.3% (41/43)    IGHJ4*02    6    ---------------------------------------------------------.....C.....................G.....  38

                                               
                                      V  S  S  
                    Query_126   364  GTCTCCTCAG  373
J  95.3% (41/43)    IGHJ4*02    39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_13095

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           313     1e-87
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGCCCTACTTATTATGCCAA	TAGTGGTT	CAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCCCTACTTATTATGCCAATAGTGGTTCAGACTTTGACTAC	ARGGPTYYANSGSDFDY	237	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	50	1	0	98
CDR2-IMGT	102	122	21	17	4	0	81
FR3-IMGT	123	236	114	107	7	0	93.9
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	228	214	14	0	93.9


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  V  S  S  Y  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  
                    Query_127    16   GTGCAGCCTCTGGGTTCACCGTCAGCAGCTACTACATGAGCTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTC  105
V  93.9% (214/228)  IGHV3-53*01  65   .........................T...A.........................T.................................T  154
                                         A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  

                                      --CDR2-IMGT-----><----------------------------------------------------FR3-IMGT------------
                                      H  S  A  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  N  L  Q  
                    Query_127    106  ATAGCGCTGGAAGTACATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTAAATCTTCAAA  195
V  93.9% (214/228)  IGHV3-53*01  155  ......G...T..C.....C..C........................................................GT.........  244
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  

                                      ----------------------------------------><--------------------CDR3-IMGT-------------------
                                      M  N  S  L  R  V  Q  D  T  A  V  Y  Y  C  A  R  G  G  P  T  Y  Y  A  N  S  G  S  D  F  D  
                    Query_127    196  TGAACAGCCTGAGAGTCCAGGACACGGCCGTGTATTATTGTGCGAGAGGAGGCCCTACTTATTATGCCAATAGTGGTTCAGACTTTGACT  285
V  93.9% (214/228)  IGHV3-53*01  245  ...............C.G...................C..........------------------------------------------  292
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                            
D  100.0% (8/8)     IGHD3-22*01  16   ----------------------------------------------------------------------........------------  23
J  100.0% (45/45)   IGHJ4*02     4    ---------------------------------------------------------------------------------.........  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_127    286  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (45/45)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_102659

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GTTCTCC	ATTGTAGTAGTTCCAG	TCCCGGATGAAA	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGTTCTCCATTGTAGTAGTTCCAGTCCCGGATGAAAACTCCTACGGAATGGACGCC	AKEFSIVVVPVPDENSYGMDA	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_128    1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTTACCACCCATGCCATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-23*01  47   .........................C................G..G.T...............................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  V  T  G  T  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_128    91   AGTGGGTCGCAAGCGTTACTGGTACTGGAGGCAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACCCCA  180
V  90.8% (227/250)  IGHV3-23*01  137  ........T..GCTA...G.....G...T..T.....................................................TT...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  I  L  F  L  Q  M  N  S  P  R  A  E  D  T  A  V  Y  Y  C  A  K  E  F  S  I  V  V  V  
                    Query_128    181  AGAACATCCTGTTTCTACAGATGAACAGCCCGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAAGAGTTCTCCATTGTAGTAGTTC  270
V  90.8% (227/250)  IGHV3-23*01  227  ......CG....A...G..A..........T.....................A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD2-2*01   6    -----------------------------------------------------------------------------...........A.  18

                                      DR3-IMGT-------------------------->                                 
                                      P  V  P  D  E  N  S  Y  G  M  D  A  W  G  Q  G  T  T  V  S  F  A  S 
                    Query_128    271  CAGTCCCGGATGAAAACTCCTACGGAATGGACGCCTGGGGCCAGGGGACCACGGTCTCCTTCGCCTCA  338
D  93.8% (15/16)    IGHD2-2*01   19   ...-----------------------------------------------------------------  21
J  86.8% (46/53)    IGHJ6*02     10   ---------------...A......T.......T.........A............A..G..T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_102658

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	216	29	0	88.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_129    1    ACCCTGTCCCTCACCTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  88.2% (216/245)  IGHV4-34*01  49   .......................CTA..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_129    91   TGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAA  180
V  88.2% (216/245)  IGHV4-34*01  139  ................A............CA.C.AC......C..T......A...............A....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W 
                    Query_129    181  CAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCTGGCGAAGACAGCGCAACTGG  270
V  88.2% (216/245)  IGHV4-34*01  229  ..GT...........C..A......T.....................G.....C......A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (49/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------.......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_129    271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (49/50)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_13093

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*09                                                                                           353     1e-99
IGHD6-19*01                                                                                           10.3    132  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*09	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGTCTTCCCGAGCGGGCT	CAGTG	AAT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTCTTCCCGAGCGGGCTCAGTGAATCC	ARGVFPSGLSES	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	258	32	0	89


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  S  S  S  I  Y
                    Query_130    1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGGCAGTTCCAGCATCTA  90
V  89.0% (258/290)  IGHV1-69*09  6    ..................................................................T..........CC.T.....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  T  W  F  R  Q  A  P  G  Q  G  L  E  W  M  G  N  V  V  P  L  F  S  I  P  T  Y  A  Q
                    Query_130    91   TGTTATCACCTGGTTCCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGAACGTCGTCCCTTTGTTTAGTATACCAACCTACGCACA  180
V  89.0% (258/290)  IGHV1-69*09  96   ..C.....G....G.G...................................A.GGA..A.....A.CC..G.....G...A.........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  I  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  V  Q  G  R  I  T  I  T  A  D  T  S  T  S  T  A  Y  M  E  L  S  S  L  T  S  D  D  T  A
                    Query_130    181  GAAGGTCCAAGGCAGAATCACGATTACCGCGGACACATCCACGAGCACGGCGTACATGGAACTGAGCAGCCTGACATCGGACGACACGGC  270
V  89.0% (258/290)  IGHV1-69*09  186  ....T....G......G..................A............A..C........G.............G...T..G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  R  G  V  F  P  S  G  L  S  E  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_130    271  CGTCTATTATTGTGCGAGAGGGGTCTTCCCGAGCGGGCTCAGTGAATCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  89.0% (258/290)  IGHV1-69*09  276  ...G.....C..........---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  100.0% (5/5)     IGHD6-19*01  9    ---------------------------------------.....---------------------------------------  13
J  100.0% (36/36)   IGHJ5*02     16   -----------------------------------------------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_13092

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           260     1e-71
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	93	21	0	81.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	205	39	0	84


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_131    1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  84.0% (205/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_131    91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  84.0% (205/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_131    181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACGTAT  270
V  84.0% (205/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_131    271  GTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    ---------------------------------...G....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_286054

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*04                                                                                           377     9e-107
IGHD2-2*01                                                                                            43.0    2e-08 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*04	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCC	TCC	GGATATTGTAGTAGTCCCAGCTGCT	TTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCTCCGGATATTGTAGTAGTCCCAGCTGCTTTTACTACTTTGATTAC	ASGYCSSPSCFYYFDY	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	30	0	0	100
FR3-IMGT	135	248	114	112	2	0	98.2
CDR3-IMGT (germline)	249	251	3	2	1	0	66.7
Total	N/A	N/A	251	246	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_132    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (246/251)  IGHV3-15*04  47   .......T.................................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  E  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_132    91   AGTGGGTTGGCCGTATTGAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  98.0% (246/251)  IGHV3-15*04  137  ..........................................................................................  226
                                      E  W  V  G  R  I  E  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  K  N  T  L  Y  M  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  S  G  Y  C  S  S  
                    Query_132    181  ATTCAAAAAACACGCTCTATATGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTGCCTCCGGATATTGTAGTAGTC  270
V  98.0% (246/251)  IGHV3-15*04  227  ................G...C...............................................A..-------------------  297
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  96.0% (24/25)    IGHD2-2*01   2    --------------------------------------------------------------------------...............A  17

                                      R3-IMGT------------------>                                  
                                      P  S  C  F  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_132    271  CCAGCTGCTTTTACTACTTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  96.0% (24/25)    IGHD2-2*01   18   .........---------------------------------------------------  26
J  97.9% (47/48)    IGHJ4*02     1    ------------..........C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_286055

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAAA	CTTTCGAC	AGTAGTGGTTAT	CGGAC	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAACTTTCGACAGTAGTGGTTATCGGACACAACTGGTTGGACCCC	GKLSTVVVIGHNWLDP	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  H  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_133    1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACATTTAGTCACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.7% (225/248)  IGHV3-23*01  47   ....................G................C.....CAG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  L  S  G  S  G  L  S  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_133    91   AGTGGGTCTCCGCTCTTAGTGGTAGTGGTCTTAGCACTTACTATACAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  90.7% (225/248)  IGHV3-23*01  137  ..........A...A..............GG......A.....CG...................G.....................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  N  T  L  Y  L  Q  M  E  S  L  S  A  D  D  T  A  V  Y  F  C  G  K  L  S  T  V  V  V  I  
                    Query_133    181  ACAACACGTTGTATCTGCAAATGGAGAGCCTGAGCGCCGACGACACGGCCGTATATTTCTGTGGGAAACTTTCGACAGTAGTGGTTATCG  270
V  90.7% (225/248)  IGHV3-23*01  227  .G......C..............A.C........A.....G................A.....C....----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD3-22*01  14   ----------------------------------------------------------------------------............--  25

                                      T------------------>                                  
                                      G  H  N  W  L  D  P  W  G  P  G  T  L  V  T  V  S  S  
                    Query_133    271  GACACAACTGGTTGGACCCCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  324
J  96.1% (49/51)    IGHJ5*02     1    ---..........C.............A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_286056

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           389     2e-110
IGHD1-26*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGTCTA	TGGGAGCT	GGGAAGTTCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGTCTATGGGAGCTGGGAAGTTCTTTTGACTAC	ARGLWELGSSFDY	287	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	97	27	23	1	3	85.2
FR2-IMGT	98	148	51	49	2	0	96.1
CDR2-IMGT	149	172	24	20	4	0	83.3
FR3-IMGT	173	286	114	105	9	0	92.1
CDR3-IMGT (germline)	287	291	5	5	0	0	100
Total	N/A	N/A	291	272	16	3	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><--------CDR1-IMGT--
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  S
                    Query_134    1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCAG  90
V  93.5% (272/291)  IGHV1-69*06  6    ........................................................................................--  93
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S   

                                      ------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-------
                                        F  A  V  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  V  P  F  F  D  T  T  N  F  A
                    Query_134    91   TTTTGCTGTCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCGTCCCTTTCTTTGATACAACAAACTTCGC  180
V  93.5% (272/291)  IGHV1-69*06  94   -.A....A...G.................................................A.....A......G....G......A...  182
                                        Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A

                                      ---------------------------------------------FR3-IMGT-------------------------------------
                                        Q  K  F  Q  G  R  V  T  F  T  A  D  K  S  T  T  T  A  Y  I  E  L  S  G  L  R  S  E  D  T
                    Query_134    181  ACAGAAGTTCCAGGGCAGAGTCACTTTTACCGCGGACAAATCGACGACCACAGCCTACATCGAGCTTAGCGGCCTCAGATCTGAGGACAC  270
V  93.5% (272/291)  IGHV1-69*06  183  ........................GA................C....G............G.....G...A....G..............  272
                                        Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T

                                      ---------------><--------------CDR3-IMGT-------------->                                  
                                        A  V  Y  Y  C  A  R  G  L  W  E  L  G  S  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_134    271  GGCCGTGTATTACTGTGCGAGGGGTCTATGGGAGCTGGGAAGTTCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.5% (272/291)  IGHV1-69*06  273  .....................--------------------------------------------------------------------  293
                                        A  V  Y  Y  C  A                                                                       
D  100.0% (8/8)     IGHD1-26*01  8    ----------------------------........-----------------------------------------------------  15
J  100.0% (43/43)   IGHJ4*02     6    ----------------------------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_286057

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           353     9e-100
IGHD6-19*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGCAGGA	AGTGGCTGG	CCCCGGGGTCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGCAGGAAGTGGCTGGCCCCGGGGTCATTTTGACTAC	ARVAGSGWPRGHFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_135    1    ACCCTGTCCCTCACCTGCACTGTCTCCGGTGGATCCGTCAGCAGTAGTAGTTACTATTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGA  90
V  95.2% (238/250)  IGHV4-61*01  49   ..........................T.....C............G..........C.......................A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  E  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S 
                    Query_135    91   CTGGAGTGGATTGAGTATATCTATTACAGGGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCGTATCAGTCGACACGTCC  180
V  95.2% (238/250)  IGHV4-61*01  139  .............G...............T....G.....................................A.......A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  A  G  S  G  W  P 
                    Query_135    181  AAGAACCAGTTCTCCCTGAAACTGAGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTAGCAGGAAGTGGCTGGCCC  270
V  95.2% (238/250)  IGHV4-61*01  229  ....................G.....C...........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD6-19*01  10   ------------------------------------------------------------------------------.........---  18

                                      ----------------->                                
                                       R  G  H  F  D  Y  *  G  Q  G  I  L  V  T  V  S  S
                    Query_135    271  CGGGGTCATTTTGACTACTAGGGCCAGGGAATCCTGGTCACCGTCTCCTC  320
J  95.1% (39/41)    IGHJ4*02     6    ---------..........G...........C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_286051

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           403     1e-114
IGHD2-15*01                                                                                           10.3    137   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCG	GCTGC	AACACAAATAGCGTATTT	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGGCTGCAACACAAATAGCGTATTTCGGTATGGACGTC	ARDPAATQIAYFGMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_136    2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAATTAT  91
V  94.5% (274/290)  IGHV1-18*01  7    .....................................................................................GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  D  T  K  Y  A  Q 
                    Query_136    92   GGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGTGGTTACAATGGTGACACAAAGTATGCACAG  181
V  94.5% (274/290)  IGHV1-18*01  97   .......G...................................................C.C..........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  F  Q  G  R  V  T  M  T  T  D  T  S  T  T  T  A  Y  L  D  L  R  S  L  R  S  D  D  R  A 
                    Query_136    182  AGGTTCCAGGGCAGAGTCACCATGACTACAGACACATCCACGACCACAGCCTATCTGGACCTGAGGAGCCTGAGATCTGACGACAGGGCC  271
V  94.5% (274/290)  IGHV1-18*01  187  .A.C......................C................G.........CA....G.........................C....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  D  P  A  A  T  Q  I  A  Y  F  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_136    272  GTATATTACTGTGCGAGAGATCCGGCTGCAACACAAATAGCGTATTTCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  361
V  94.5% (274/290)  IGHV1-18*01  277  ..G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (5/5)     IGHD2-15*01  21   ------------------------.....-------------------------------------------------------------  25
J  100.0% (45/45)   IGHJ6*02     17   -----------------------------------------------...........................................  59

                                        
                                       S
                    Query_136    362  TC  363
J  100.0% (45/45)   IGHJ6*02     60   ..  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_286052

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           315     5e-88
IGHD6-19*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTA	GGGTATAGTAGTGGCTGGTAC	TATGACAAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTAGGGTATAGTAGTGGCTGGTACTATGACAAATTTGACTAC	AKDVGYSSGWYYDKFDY	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	19	5	0	79.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	233	217	16	0	93.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  H  G  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  A  S  S  V 
                    Query_137    13   TGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGGCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGCCTCAAGTGTT  102
V  93.1% (217/233)  IGHV3-23*01  64   ..............................T...C............................................T....GC.A..  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  S  G  S  I  R  E  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_137    103  AGTGGAAGTGGTAGTATCAGAGAATACGCAGAATCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATTTG  192
V  93.1% (217/233)  IGHV3-23*01  154  .....T......G...G..C.T.C........C......................................................C..  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------------CDR3-IMGT---------------
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  V  G  Y  S  S  G  W  Y  Y  D  K  F 
                    Query_137    193  CAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTATTGTGCGAAAGATGTAGGGTATAGTAGTGGCTGGTACTATGACAAATTT  282
V  93.1% (217/233)  IGHV3-23*01  244  ...................................A.....C...........-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  95.2% (20/21)    IGHD6-19*01  1    ---------------------------------------------------------........C............------------  21
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_137    283  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  100.0% (43/43)   IGHJ4*02     9    ........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_286053

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           283     1e-78
IGHD2-2*01                                                                                            10.3    120  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAGGGAAGCCGAC	CCAGC	CGC	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGCAGGGAAGCCGACCCAGCCGCACTGCTTTGACTCC	TRAGKPTQPHCFDS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	215	34	0	86.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  F  G  F  S  F  S  S  Y  G  I  R  W  V  R  Q  A  P  G  K  G  L  
                    Query_138    1    GGTCCCTGAGACTCTCCTGTGCAGGCTTTGGATTCAGCTTCAGTTCGTATGGCATACGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  86.3% (215/249)  IGHV3-64*01  47   ........................C..C........C.......AGC....CT..G.A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  A  G  I  S  T  D  G  S  K  T  S  Y  V  N  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_138    91   AATATGTTGCAGGTATTAGTACTGATGGTTCTAAGACATCTTATGTGAACTCTGTGAAGGGTAGATTCACCGTCTCTAGAGACAATGCCA  180
V  86.3% (215/249)  IGHV3-64*01  137  ........T...C........G.A....GGG..GC....A.....CA..............C.........A....C.........T...  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  S  T  V  F  L  Q  M  G  S  L  R  G  E  D  M  A  V  Y  Y  C  T  R  A  G  K  P  T  Q  P  
                    Query_138    181  GGAGTACGGTGTTTCTTCAAATGGGCAGCCTGAGAGGTGAGGACATGGCCGTGTATTACTGTACGAGAGCAGGGAAGCCGACCCAGCCGC  270
V  86.3% (215/249)  IGHV3-64*01  227  A..AC...C...A.......................C............T............G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-2*01   18   ----------------------------------------------------------------------------------.....---  22

                                      ------------->                                  
                                      H  C  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_138    271  ACTGCTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  95.8% (46/48)    IGHJ4*02     1    ...A........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_161460

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           378     3e-107
IGHD4-17*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGG	GACTACGGTGACTAC	AGTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATGGGGACTACGGTGACTACAGTATTGACTAC	ARDGDYGDYSIDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_139    1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGG  90
V  98.4% (246/250)  IGHV3-33*01  47   .....................................................................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_139    91   AGTGGGTGGCATTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  98.4% (246/250)  IGHV3-33*01  137  ...........G..............................................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  D  Y  G  D  Y  
                    Query_139    181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGCGAGATGGGGACTACGGTGACTACA  270
V  98.4% (246/250)  IGHV3-33*01  227  ....................................................G............A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD4-17*01  2    --------------------------------------------------------------------------...............-  16

                                      ---------->                                  
                                      S  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_139    271  GTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (42/42)   IGHJ4*02     7    ---..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_167232

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           391     5e-111
IGHD3-16*01                                                                                           12.2    33    
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTTTCC	TGGGGG	N/A	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTCCTGGGGGTGCTTATGATATC	ARHFPGGAYDI	261	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	22	2	0	91.7
FR2-IMGT	75	125	51	50	1	0	98
CDR2-IMGT	126	146	21	20	1	0	95.2
FR3-IMGT	147	260	114	110	4	0	96.5
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	259	9	0	96.6


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  F  C  S  W  I  R  
                    Query_140    1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTTCTGCAGCTGGATCCGGC  90
V  96.6% (259/268)  IGHV4-59*08  26   ................T.....................................G.................A...G.............  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_140    91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTCTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  96.6% (259/268)  IGHV4-59*08  116  .......................................A..................................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  P  K  N  Q  F  S  L  K  L  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  H  
                    Query_140    181  TATCAGTTGACACGCCCAAGAACCAGTTCTCCCTGAAGCTGACCTCTGTGTCCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATT  270
V  96.6% (259/268)  IGHV4-59*08  206  .......A......T...........................G.......A.....................................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      --CDR3-IMGT----------->                                  
                                      F  P  G  G  A  Y  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_140    271  TTCCTGGGGGTGCTTATGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  327
D  100.0% (6/6)     IGHD3-16*01  17   ----......-----------------------------------------------  22
J  97.9% (46/47)    IGHJ3*02     4    ----------.....T.........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_21074

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ5*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGTTCTGAGT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTCTGAGTCC	AGHLVTPGTRGSES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_141   1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01  49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_141   91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01  139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_141   181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01  229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01  13   ----------------------------------------------------------------------.....C..G...--------  24

                                     ----------->                                  
                                      G  S  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_141   271  GGTTCTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  97.2% (35/36)    IGHJ5*02    16   ----------....................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_232365

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           316     2e-88
IGHD3-3*01                                                                                            44.9    5e-09
IGHJ3*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	N/A	TTACGATTTTTGGAGTGGTTATT	CCCCCCTGC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGATTACGATTTTTGGAGTGGTTATTCCCCCCTGCCTTTTGATGTC	TTDYDFWSGYSPLPFDV	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	102	12	0	89.5
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	229	27	0	89.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  D  F  T  N  A  W  M  R  W  V  R  Q  A  P  G  K  G  L  
                    Query_142    1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCGATTTCACAAACGCCTGGATGAGGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.5% (229/256)  IGHV3-15*01  47   .......T.............C.............AC.....GT..............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  Q  I  K  N  K  K  D  G  G  T  I  D  Y  A  A  P  V  Q  G  R  F  T  I  S  R  H  
                    Query_142    91   AGTGGGTCGGCCAAATTAAAAACAAAAAAGATGGTGGCACAATAGACTACGCAGCACCCGTGCAGGGGAGATTTACCATCTCAAGACATG  180
V  89.5% (229/256)  IGHV3-15*01  137  .......T....GT.......G.....CT........G....C.........T.........A.A..C.....C............G...  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  A  K  D  T  L  F  L  Q  M  N  S  L  E  T  E  D  T  A  V  Y  Y  C  T  T  D  Y  D  F  W  
                    Query_142    181  ACGCAAAAGACACGCTGTTTCTGCAAATGAACAGCCTGGAAACCGAGGACACAGCCGTGTATTATTGTACCACAGATTACGATTTTTGGA  270
V  89.5% (229/256)  IGHV3-15*01  227  .TT.....A.........A...................A.........................C...........--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (23/23)   IGHD3-3*01   4    ----------------------------------------------------------------------------..............  17

                                      DR3-IMGT-------------------->                                  
                                      S  G  Y  S  P  L  P  F  D  V  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_142    271  GTGGTTATTCCCCCCTGCCTTTTGATGTCTGGGGCCAGGGGACTCTGGTCACCGTCTCTTCAG  333
D  100.0% (23/23)   IGHD3-3*01   18   .........------------------------------------------------------  26
J  93.3% (42/45)    IGHJ3*01     6    ------------------...................A.....AA..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_232364

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           332     3e-93
IGHD3-16*01                                                                                           14.1    8.3  
IGHJ5*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AACGA	GTATCATGAT	AGCAACAGTTACC	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAACGAGTATCATGATAGCAACAGTTACCTCGACTCC	ARNEYHDSNSYLDS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_143    1    GGTCCCTGAGACTCTCCTGTGCAGCATCTGGATTCACCTTCAGTAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.7% (230/248)  IGHV3-33*01  47   .........................G...................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  D  K  L  Y  A  D  S  V  R  G  R  F  A  I  S  R  D  N  S  
                    Query_143    91   AATGGGTGGCAGTTATCTGGTATGATGGAAGTGACAAATTGTATGCAGACTCCGTGAGGGGCCGATTCGCCATCTCCAGAGACAATTCCA  180
V  92.7% (230/248)  IGHV3-33*01  137  .G..............A...............A.T....AC................A..........A.....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  N  E  Y  H  D  S  N  
                    Query_143    181  AGAACACGTTGTTTCTGCAGATGAACAGCCTGAGGGCCGAAGACACGGCTATATATTACTGTGCGAGAAACGAGTATCATGATAGCAACA  270
V  92.7% (230/248)  IGHV3-33*01  227  ........C...A......A..............A.....G.........G.G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-16*01  1    -------------------------------------------------------------------------....T.....-------  10

                                      ------------->                                  
                                      S  Y  L  D  S  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_143    271  GTTACCTCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  318
J  95.2% (40/42)    IGHJ5*01     10   ------................A.....................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_92898

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           319     2e-89
IGHD3-3*01                                                                                            14.1    8.1  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TGC	GGAGTGG	ACTTATG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGCGGAGTGGACTTATGGACTCC	ARLRSGLMDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	14	7	0	66.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  I  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  N  G 
                    Query_144    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAACATTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCGGGGAACGGA  90
V  90.8% (227/250)  IGHV4-39*01  49   ...............................G........G..G..G.................................A.....G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  V  S  N  S  G  N  T  Y  Y  N  P  S  L  K  R  R  V  T  V  S  V  D  T  S 
                    Query_144    91   CTGGAGTGGCTTGGGAGTGTCTCGAACAGTGGTAACACCTACTACAACCCGTCCCTCAAGCGTCGGGTCACCGTATCCGTAGACACGTCC  180
V  90.8% (227/250)  IGHV4-39*01  139  .........A........A...ATT.T.....G.G.........................A....A......A.................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       N  H  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  R  S  G  L  M  D 
                    Query_144    181  AATCATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTTCTGTGCGAGACTGCGGAGTGGACTTATGGAC  270
V  90.8% (227/250)  IGHV4-39*01  229  ..GA.C.............A......................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   15   -------------------------------------------------------------------------.......----------  21
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_144    271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_232366

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD2-21*02                                                                                           29.5    2e-04
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_145    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  93.9% (229/244)  IGHV4-59*01  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  S  L  K  P  R  V  T  I  S  L  D  T  S  K  N 
                    Query_145    91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCTCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGTCCAAGAAC  180
V  93.9% (229/244)  IGHV4-59*01  139  ...A....G......T.......T..............................AG............A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A  N  Y 
                    Query_145    181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCAAACTAC  270
V  93.9% (229/244)  IGHV4-59*01  229  .............A...............C..T...............................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------..........G.......-------  22
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_145    271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_232360

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           414     5e-118
IGHD1-1*01                                                                                            10.3    136   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAACG	GGTAACCCCATATCGCGGC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTAT	ARGTGNPISRLGY	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	70	1	0	98.6
CDR1-IMGT	77	100	24	24	0	0	100
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  
                    Query_146    6    TGCAGCTGGTGCAGTCTGGGGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCT  95
V  95.5% (278/291)  IGHV1-46*01  5    .....................C....................................................................  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  A  G  S  T  N  Y  A  
                    Query_146    96   ACTATGTGCACTGGGTACGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGCTGGTAGCACAAATTACGCAC  185
V  95.5% (278/291)  IGHV1-46*01  95   .....A..........G....................................................G...........GC.......  184
                                      Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  L  D  R  S  S  L  K  S  D  D  T  
                    Query_146    186  AGAAATTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACTTGGACCGGAGCAGCCTTAAATCTGACGACACGG  275
V  95.5% (278/291)  IGHV1-46*01  185  ....G...................................................A....G.T.........G.G......G.......  274
                                      Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><--------------CDR3-IMGT-------------->                                  
                                      A  V  Y  Y  C  A  R  G  T  G  N  P  I  S  R  L  G  Y  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_146    276  CCGTGTATTACTGTGCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  362
V  95.5% (278/291)  IGHV1-46*01  275  .....................------------------------------------------------------------------  295
                                      A  V  Y  Y  C  A  R                                                                    
D  100.0% (5/5)     IGHD1-1*01   11   ---------------------.....-------------------------------------------------------------  15
J  92.9% (39/42)    IGHJ4*02     7    ---------------------------------------------...A...C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_232363

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           343     2e-96
IGHD2-15*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CCTCTGGTT	TTGTAGTGGTGCTAACTGCTACTC	GGACG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCCTCTGGTTTTGTAGTGGTGCTAACTGCTACTCGGACGACTTTGACTAC	ALWFCSGANCYSDDFDY	252	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	38	38	29	0	9	76.3
CDR1-IMGT	39	62	24	23	1	0	95.8
FR2-IMGT	63	113	51	50	1	0	98
CDR2-IMGT	114	137	24	20	4	0	83.3
FR3-IMGT	138	251	114	114	0	0	100
CDR3-IMGT (germline)	252	253	2	2	0	0	100
Total	N/A	N/A	253	238	6	9	94.1


Alignments

                                      <--------------FR1-IMGT--------------><-------CDR1-IMGT------><--------------------FR2-IMG
                                         S  L  R  L  S  C  A  A  S  G  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  
                    Query_147    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGA  90
V  94.1% (238/253)  IGHV3-21*01  47   ..........................---------....................C..................................  127
                                         S  L  R  L  S  C  A  A           S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  

                                      T---------------------><-------CDR2-IMGT------><------------------------------------------
                                      K  G  L  E  W  V  S  Y  S  S  S  S  S  R  S  V  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  
                    Query_147    91   AGGGGCTGGAGTGGGTCTCATACAGTAGTAGTAGTAGTCGTTCCGTATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAG  180
V  94.1% (238/253)  IGHV3-21*01  128  .....................C..T.............A...A.A.............................................  217
                                      K  G  L  E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  

                                      ----------FR3-IMGT----------------------------------------------------><------------------
                                      D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  L  W  F  C  S  
                    Query_147    181  ACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCCCTCTGGTTTTGTAGTG  270
V  94.1% (238/253)  IGHV3-21*01  218  .........................................................................-----------------  290
                                      D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                 
D  91.7% (22/24)    IGHD2-15*01  7    ----------------------------------------------------------------------------------........  14

                                      --CDR3-IMGT-------------------->                                  
                                      G  A  N  C  Y  S  D  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_147    271  GTGCTAACTGCTACTCGGACGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  91.7% (22/24)    IGHD2-15*01  15   ...G..G.........--------------------------------------------------  30
J  100.0% (45/45)   IGHJ4*02     4    ---------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_9818

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           321     6e-90
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_148    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_148    91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_148    181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.8% (225/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_148    271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_92892

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           329     3e-92
IGHD2-8*01                                                                                            12.2    31   
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TAATGG	CCCGACTGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGGCCCGACTGAACTACGGCATGGACGTC	ARLMARLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  L  T  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_149    1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCCTCACCAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCCGGGAAGGGACTGGAA  90
V  93.0% (227/244)  IGHV4-59*08  49   ..................A............G....A...GT..................A.............A..............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  R  P  N  N  N  P  S  L  R  S  R  V  T  I  S  V  D  A  S  K  N 
                    Query_149    91   TGGATTGAGTATATCTATTACAGAGGGCGTCCCAACAACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACGCGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*08  139  .......G...............T...A.CA.....T...............A.........................A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  A  R  L  N  Y  G  M 
                    Query_149    181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACTAATGGCCCGACTGAACTACGGCATG  270
V  93.0% (227/244)  IGHV4-59*08  229  ...................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-8*01   13   ----------------------------------------------------------------......--------------------  18
J  94.0% (47/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_149    271  GACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCGTCA  309
J  94.0% (47/50)    IGHJ6*02     24   .............A.....................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_92893

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           402     3e-114
IGHD1-26*01                                                                                           12.2    36    
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	CCCCTGCGTTCCC	AGTGGG	CCTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGTGACCCCTGCGTTCCCAGTGGGCCTTTGATGCTATTGATATC	V*PLRSQWAFDAIDI	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	4	2	0	66.7
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  E  N  S  F  T  N  Y
                    Query_150    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGAAAACAGCTTTACCAACTA  90
V  94.5% (273/289)  IGHV5-51*03  6    .......................................................................G.T............G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  I  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  S  P  G  D  S  D  T  R  Y  S  P
                    Query_150    91   CTGGATCGGCTGGATACGCCAGATGCCCGGGAAAGGCCTCGAGTGGATGGGGTTCATCTCTCCTGGTGACTCTGATACCAGATACAGCCC  180
V  94.5% (273/289)  IGHV5-51*03  96   .............G.G.......................G............A......A..............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  V  S  A  D  R  S  I  T  T  A  Y  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_150    181  GTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAGGTCCATCACCACCGCCTACCTGCAGTGGAACAGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (273/289)  IGHV5-51*03  186  ......................A............A........G....................G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  V  *  P  L  R  S  Q  W  A  F  D  A  I  D  I  W  G  Q  G  T  M  V  T  V  S  S
                    Query_150    271  TGTGTATTACTGTGTGTGACCCCTGCGTTCCCAGTGGGCCTTTGATGCTATTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  360
V  94.5% (273/289)  IGHV5-51*03  276  CA............C.A..-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD1-26*01  6    --------------------------------......----------------------------------------------------  11
J  98.0% (49/50)    IGHJ3*02     1    ------------------------------------------.......T........................................  48

                                        
                                        
                    Query_150    361  AG  362
J  98.0% (49/50)    IGHJ3*02     49   ..  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_92890

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           382     3e-108
IGHD3-10*01                                                                                           18.0    0.59  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCTC	TATTACTAT	CAATTAGACT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCTCTATTACTATCAATTAGACTACTACTTTGACTAC	ARGLYYYQLDYYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	246	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_151    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  99.2% (246/248)  IGHV4-31*03  49   .........................................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_151    91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  99.2% (246/248)  IGHV4-31*03  139  ..........................................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  R  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  Q  L 
                    Query_151    181  AAGAACCAGTTCTCCCTGAAGCGGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGCCTCTATTACTATCAATTA  270
V  99.2% (246/248)  IGHV4-31*03  229  ......................T.............................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (9/9)     IGHD3-10*01  2    ---------------------------------------------------------------------------.........------  10

                                      ----------------->                                  
                                       D  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  F  S  S  
                    Query_151    271  GACTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCTTTTCCTCAG  322
J  95.8% (46/48)    IGHJ4*02     1    ----......................................G.C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_92891

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            355     3e-100
IGHD3-16*01                                                                                           12.2    31    
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGGC	GGGGGA	CCTACCGTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGCGGGGGACCTACCGTGTTTGACTAC	ARGGGGPTVFDY	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  S  K  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_152    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGTAGTAAATGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  96.0% (237/247)  IGHV4-4*02   49   ...............................G..................C.......G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  Y  H  S  G  S  S  N  Y  S  P  S  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_152    91   GAGTGGATTGGGGATATCTATCATAGTGGGAGCTCCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  96.0% (237/247)  IGHV4-4*02   139  ..............A..................A.........A..........A...................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  G  P  T  V  F 
                    Query_152    181  AATCAGTTCTCCCTGAAGCTGACATCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCGGCGGGGGACCTACCGTGTTT  270
V  96.0% (237/247)  IGHV4-4*02   229  ..C...................GC...........................................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------------......------------  23
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_152    271  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (43/43)   IGHJ4*02     9    ........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_232369

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	222	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  H  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_153    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACCACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  91.7% (222/242)  IGHV4-59*01  49   ..........................................AG....T.........................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  K  S  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_153    91   TGGATTGGATATATCTTCTACAGTGGCAAATCCAAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACATCCAAGAAG  180
V  91.7% (222/242)  IGHV4-59*01  139  ........G.......AT........G.GCA....C............................................G........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  L  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_153    181  CAGTTGTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGCGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  91.7% (222/242)  IGHV4-59*01  229  .....C.......A......C.........G................G........T.....----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_153    271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_167258

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         386     1e-109
IGHD3-16*01                                                                                           12.2    34    
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	ATTATG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATGACTACTTTGACTAC	ARHYDYFDY	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  R  G  F  G  Y  S  F  T  S  F
                    Query_154      1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGTTTTGGATACAGCTTTACCAGCTT  90
V  92.7% (268/289)  IGHV5-10-1*01  6    ....................C.........................................A.....C....................A  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  F  D  S  S  T  D  Y  T  P
                    Query_154      91   CTGGATCACTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAGAATTGATCCTTTTGACTCTTCTACCGACTATACGCC  180
V  92.7% (268/289)  IGHV5-10-1*01  96   ........GC.........................................G..G.........AG........A....A....C.GC..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  N  S  I  S  T  A  Y  L  H  L  S  S  L  K  A  S  D  T  G
                    Query_154      181  GTCATTCCAAGGCCACGTCACCATCTCAGCTGACAACTCCATCAGTACTGCCTACCTGCACTTGAGCAGCCTGAAGGCCTCGGACACCGG  270
V  92.7% (268/289)  IGHV5-10-1*01  186  ...C................................G........C..............G.G..........................C  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------CDR3-IMGT-------->                                  
                                          M  Y  Y  C  A  R  H  Y  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_154      271  CATGTATTACTGTGCGAGACATTATGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  344
V  92.7% (268/289)  IGHV5-10-1*01  276  ...................-------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                        
D  100.0% (6/6)     IGHD3-16*01    3    --------------------......------------------------------------------------  8
J  100.0% (48/48)   IGHJ4*02       1    --------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_92895

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           318     6e-89
IGHD4-17*01                                                                                           16.1    2.5  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GG	CGGTGACT	TCGAGTT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCGGTGACTTCGAGTTACAACTGGTTCGACCCC	ARAVTSSYNWFDP	287	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	97	27	19	5	3	70.4
FR2-IMGT	98	148	51	47	4	0	92.2
CDR2-IMGT	149	172	24	18	6	0	75
FR3-IMGT	173	286	114	94	20	0	82.5
CDR3-IMGT (germline)	287	291	5	5	0	0	100
Total	N/A	N/A	291	249	39	3	85.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><--------CDR1-IMGT--
                                        Q  L  V  Q  S  G  A  E  V  K  T  P  G  S  S  V  K  V  S  C  R  A  S  G  A  S  S  F  S  T
                    Query_155    1    GCAGCTGGTGCAGTCTGGAGCTGAAGTGAAGACGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGGCTTCTGGGGCCAGCAGTTTCAGCAC  90
V  85.6% (249/291)  IGHV1-69*06  6    ..................G.....G.......A.............................A.........A.G..C.---.......G  92
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T     F  S  S

                                      ------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-------
                                        Y  G  L  S  W  V  R  Q  A  P  G  Q  G  P  E  W  L  G  G  L  V  P  I  F  E  S  A  T  Y  A
                    Query_155    91   CTATGGTCTCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGCTGGGAGGGCTCGTCCCTATATTTGAGTCAGCAACCTACGC  180
V  85.6% (249/291)  IGHV1-69*06  93   .....C.A....C............................T.......A........A..A.......C....GTA......A......  182
                                        Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A

                                      ---------------------------------------------FR3-IMGT-------------------------------------
                                        Q  K  F  Q  D  R  V  S  I  T  A  D  K  D  S  N  T  G  Y  M  E  L  R  G  L  R  L  E  D  T
                    Query_155    181  ACAGAAGTTTCAAGACAGAGTCTCTATTACCGCGGACAAAGATTCGAACACAGGCTACATGGAACTGAGAGGCCTGAGACTTGAAGACAC  270
V  85.6% (249/291)  IGHV1-69*06  183  .........C..G.G.......A.G...............TCCA...G.....C.........G.....CA........TC...G.....  272
                                        Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T

                                      ---------------><--------------CDR3-IMGT-------------->                                  
                                        A  V  Y  Y  C  A  R  A  V  T  S  S  Y  N  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  A  
                    Query_155    271  GGCCGTCTATTATTGTGCGAGGGCGGTGACTTCGAGTTACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCGCAG  359
V  85.6% (249/291)  IGHV1-69*06  273  ......G.....C........--------------------------------------------------------------------  293
                                        A  V  Y  Y  C  A                                                                       
D  100.0% (8/8)     IGHD4-17*01  7    -----------------------........----------------------------------------------------------  14
J  96.1% (49/51)    IGHJ5*02     1    --------------------------------------.......................................C.......T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_223260

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           369     2e-104
IGHD1-26*01                                                                                           16.1    2.5   
IGHJ1*01                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGAC	GGGAGCTA	TCCCTGGCGACTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGATCGACGGGAGCTATCCCTGGCGACTTC	SRSTGAIPGDF	292	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	72	3	0	96
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	18	6	0	75
FR3-IMGT	178	291	114	101	13	0	88.6
CDR3-IMGT (germline)	292	297	6	5	1	0	83.3
Total	N/A	N/A	294	265	29	0	90.1


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_156    4    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAAAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  93
V  90.1% (265/294)  IGHV1-18*01  1    .....T.....G.......................G......................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  F  G  V  T  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  R  A  A  Y  N  A  D  T  K  Y 
                    Query_156    94   GACTTTGGTGTCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGTTGGGATGGAGAGCCGCTTACAATGCTGACACAAAGTAT  183
V  90.1% (265/294)  IGHV1-18*01  91   AG..A....A...G.....................................A.........TCAG...........G.A.......C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       T  P  K  L  Q  G  R  L  T  L  T  T  D  S  S  T  S  T  A  Y  L  D  L  R  S  L  R  S  D  D 
                    Query_156    184  ACACCGAAACTCCAGGGCAGACTCACCTTGACCACCGACTCATCCACGAGCACAGCCTACTTGGACTTGAGGAGCCTGAGATCTGACGAC  273
V  90.1% (265/294)  IGHV1-18*01  181  G...A...G............G.....A.......A...A....................A....GC.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------CDR3-IMGT----------->                                  
                                       T  A  L  Y  Y  C  S  R  S  T  G  A  I  P  G  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_156    274  ACGGCCCTTTATTACTGTTCGAGATCGACGGGAGCTATCCCTGGCGACTTCTGGGGCCAGGGCACCCTCGTCACCGTCTCCTCAG  358
V  90.1% (265/294)  IGHV1-18*01  271  ......G.G.........G.....-------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                              
D  100.0% (8/8)     IGHD1-26*01  9    -----------------------------........------------------------------------------------  16
J  97.1% (34/35)    IGHJ1*01     18   --------------------------------------------------..................G................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_167259

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     8e-121
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGGACAC	TGTAGTAGTGCCATCTGCGATG	GACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTAC	ARHMGHCSSAICDGPDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	281	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  Q  K  P  G  E  A  L  K  I  S  C  K  G  S  G  Y  S  F  G  S  Y
                    Query_157    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGCAAAAGCCGGGGGAGGCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCAGTTA  90
V  96.6% (281/291)  IGHV5-51*01  6    ............................A.......C......T......................................AC...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_157    91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.6% (281/291)  IGHV5-51*01  96   ........G.................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_157    181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  96.6% (281/291)  IGHV5-51*01  186  .............................C.........C.................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  M  G  H  C  S  S  A  I  C  D  G  P  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_157    271  CATGTATTACTGTGCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  96.6% (281/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  86.4% (19/22)    IGHD2-2*01   8    -------------------------------.........A...G....T...-------------------------------------  29
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_157    361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_271891

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           293     2e-81
IGHD5-12*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCCAACACGCCG	GTGGCAACGA	GTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCCAACACGCCGGTGGCAACGAGTTT	AGQHAGGNEF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	216	29	0	88.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  T  F  E  M  I  W  V  R  Q  P  P  G  K  G  L  
                    Query_158    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGCACTTTTGAAATGATCTGGGTCCGCCAGCCTCCAGGGAAGGGCCTGG  90
V  88.2% (216/245)  IGHV3-48*03  47   ....................................C......T.G..A........A.............G.............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  K  I  S  R  S  G  S  D  T  S  Y  A  V  S  V  K  G  R  F  T  V  S  R  D  S  A  
                    Query_158    91   AGTGGGTTTCAAAGATTAGTCGGAGTGGTAGTGACACTTCCTATGCAGTCTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAGCGCCA  180
V  88.2% (216/245)  IGHV3-48*03  137  ...........T.C......A.T.........AC..TA.A...C....A......................A............A.....  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  F  L  Q  M  S  S  L  R  V  G  D  S  G  L  Y  Y  C  A  G  Q  H  A  G  G  N  E  
                    Query_158    181  AGAACTCACTGTTTCTCCAAATGAGCAGCCTGAGAGTCGGGGACAGCGGTCTTTATTACTGTGCGGGCCAACACGCCGGTGGCAACGAGT  270
V  88.2% (216/245)  IGHV3-48*03  227  ............A...G.......A...........C..A.....CG.C.G..............-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.0% (9/10)     IGHD5-12*01  10   ------------------------------------------------------------------------------.....T....--  19

                                      ->                                  
                                      F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_158    271  TTTGGGGCCAGGGAGCCCTGGTCACCGTTTCCTCAG  306
J  94.1% (32/34)    IGHJ4*02     15   --............A.............C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_23918

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           428     3e-122
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAAGCCGGC	TACTGTGGTTCGGGG	GAGTT	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAAGCCGGCTACTGTGGTTCGGGGGAGTTGTATGGACGTC	AREKPATVVRGSCMDV	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	111	3	0	97.4
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	285	11	0	96.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  F  T  F  T 
                    Query_159    3    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTTCACCTTTACC  92
V  96.3% (285/296)  IGHV1-18*01  1    .....T.....G...................................................................A..........  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  K  T  N  Y 
                    Query_159    93   ACCTATGGTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCCCTTACAATGGTAAAACAAACTAT  182
V  96.3% (285/296)  IGHV1-18*01  91   .G...........G..........................................A.........G.............C.........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       G  Q  K  V  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  T  S  L  R  S  D  D 
                    Query_159    183  GGACAGAAGGTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGACGAGCCTGAGATCTGACGAC  272
V  96.3% (285/296)  IGHV1-18*01  181  .C.......C............................................................G...................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  E  K  P  A  T  V  V  R  G  S  C  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_159    273  ACGGCCGTGTATTACTGTGCGAGAGAAAAGCCGGCTACTGTGGTTCGGGGGAGTTGTATGGACGTCTGGGGCCAAGGGACCACGGTCACC  362
V  96.3% (285/296)  IGHV1-18*01  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  93.3% (14/15)    IGHD3-10*01  5    -----------------------------------....A..........----------------------------------------  19
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------------...................................  53

                                               
                                       V  S  S 
                    Query_159    363  GTCTCCTCA  371
J  100.0% (44/44)   IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_29303

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         371     6e-105
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTGG	CTATGGTTCGGGGAGTTATTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATCGTGGCTATGGTTCGGGGAGTTATTATTTTGACAAC	ARDRGYGSGSYYFDN	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_160      1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  97.2% (244/251)  IGHV4-30-4*01  49   ..................A.......................................................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_160      91   CTGGAGTGGATTGGGTACATCCATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  97.2% (244/251)  IGHV4-30-4*01  139  .....................T............G.................................T.....................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  A  Y  H  C  A  R  D  R  G  Y  G  S  G 
                    Query_160      181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGCCTATCACTGTGCCAGAGATCGTGGCTATGGTTCGGGG  270
V  97.2% (244/251)  IGHV4-30-4*01  229  ....................................................TG...T.............-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01    7    -----------------------------------------------------------------------------.............  19

                                        ----------------->                                  
                                         S  Y  Y  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_160      271  AGTTATTATTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  322
D  100.0% (22/22)   IGHD3-10*01    20   .........-------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02       6    ---------......T...............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_79993

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           291     5e-81
IGHD1-1*01                                                                                            12.2    32   
IGHJ2*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGA	TACAAC	GAATTATTCTGGGACCTTCGATGGG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGATACAACGAATTATTCTGGGACCTTCGATGGGTTCGATCTC	ARDDTTNYSGTFDGFDL	237	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	122	21	15	3	3	71.4
FR3-IMGT	123	236	114	106	8	0	93
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	244	217	24	3	88.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  L  S  G  V  S  I  S  G  Y  Y  W  H  W  I  R  Q  P  S  G  K  G  L  E  
                    Query_161    4    CCCTGAGACTCTCCTGCTCTCTCTCTGGTGTCTCCATCAGTGGTTACTACTGGCACTGGATCCGGCAGCCCTCAGGGAAGGGACTGGAGT  93
V  88.9% (217/244)  IGHV4-59*01  50   .....TCC...A.....A..G.........G..........A...........AG................C..................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  N     S  G  G  T  K  Y  S  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_161    94   GGATCGGCTATATCAAT---AGCGGGGGCACCAAGTACAGTCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  180
V  88.9% (217/244)  IGHV4-59*01  140  ....T..G......T..TAC..T...A.......C....AC..........A......................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  F  Y  Y  C  A  R  D  D  T  T  N  Y  S  G  T  
                    Query_161    181  AGTTCTCCCTGAAACTGACCTCTGTGACCGCTGCGGACACGGCCTTTTATTACTGTGCGAGAGACGATACAACGAATTATTCTGGGACCT  270
V  88.9% (217/244)  IGHV4-59*01  230  .............G....G.........................G.G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD1-1*01   3    -------------------------------------------------------------------......-----------------  8

                                      ---------------->                                  
                                      F  D  G  F  D  L  W  G  R  G  T  L  V  S  V  S  S  
                    Query_161    271  TCGATGGGTTCGATCTCTGGGGCCGTGGCACCCTTGTCTCTGTCTCCTCAG  321
J  95.3% (41/43)    IGHJ2*01     11   --------..........................G...A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_343463

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           321     7e-90
IGHD3-16*01                                                                                           14.1    8.4  
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCTGCGGACTGG	GATTACG	GTT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCTGCGGACTGGGATTACGGTTACTGGTTTGACCAC	AKAADWDYGYWFDH	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_162    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCGCCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.5% (226/247)  IGHV3-23*01  47   ............................................AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  G  S  H  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_162    91   AGTGGGTCTCAGGTATTAGTGGTGGTTCTCATAATACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.5% (226/247)  IGHV3-23*01  137  ............C..........A..GG.GG..GC.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  L  R  M  N  N  L  R  A  E  D  A  A  L  Y  Y  C  A  K  A  A  D  W  D  Y  G  
                    Query_162    181  AGAACACGCTCTCTCTGCGCATGAACAATCTCAGAGCCGAGGACGCGGCCCTATACTACTGTGCGAAGGCTGCGGACTGGGATTACGGTT  270
V  91.5% (226/247)  IGHV3-23*01  227  ..........G.A.....AA.......GC..G............A.....G....T...........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  8    --------------------------------------------------------------------------------.......---  14

                                      ------------->                                  
                                      Y  W  F  D  H  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_162    271  ACTGGTTTGACCACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  93.8% (45/48)    IGHJ5*02     4    .......C....C..............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_223261

Length=315
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           346     2e-97
IGHD2-21*02                                                                                           10.3    110  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TC	ACTGC	GTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCACTGCGTTCTAC	VTAFY	243	257	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  F  W  M  H  W  V  R  Q  A  P  G  Q  G  L  
                    Query_163    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGGCTTCTGGATGCACTGGGTCCGCCAAGCTCCAGGGCAGGGGCTGG  90
V  95.5% (232/243)  IGHV3-74*01  47   ............................................A...A...............................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  G  D  G  S  S  T  A  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  A  
                    Query_163    91   TCTGGGTCTCACGTATTAATGGTGATGGGAGTAGCACAGCCTACGCGGACTCCGTTAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  95.5% (232/243)  IGHV3-74*01  137  .G..................A.................AG...............G.........T........................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--CDR3-IMGT-->             
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  V  T  A  F  Y  W  G  Q  G  
                    Query_163    181  AGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGTCGAGGACACGGCTGTCTATTACTGTGTCACTGCGTTCTACTGGGGCCAGGGAA  270
V  95.5% (232/243)  IGHV3-74*01  227  ....................................C...............G..........---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (5/5)     IGHD2-21*02  18   -----------------------------------------------------------------.....--------------------  22
J  97.4% (37/38)    IGHJ4*02     11   -------------------------------------------------------------------------.................  27

                                                           
                                      T  L  V  T  V  S  S  
                    Query_163    271  CCCTGGTCACCGTCTCTTCAG  291
J  97.4% (37/38)    IGHJ4*02     28   ................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30410208


Query= Query_9811

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           347     7e-98
IGHD3-16*01                                                                                           10.3    120  
IGHJ2*01                                                                                              102     4e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TGGGG	TGCCCACTTCAA	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGGGTGCCCACTTCAACTACTGGTACTTCGATCTC	ARWGAHFNYWYFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  A  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_164    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGCATTCACCCTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGG  90
V  94.8% (235/248)  IGHV3-30*03  47   ..............................G.......T..............................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  N  N  R  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_164    91   AGTGGGTGGCGGTTATATCATATGATGGAAATAATAGATACTATGCCGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (235/248)  IGHV3-30*03  137  ..........A...................G.....A.........A...........................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  L  Q  M  N  G  L  R  V  E  D  T  A  I  Y  Y  C  A  R  W  G  A  H  F  N  Y  
                    Query_164    181  AGAACACGCTGTCTCTGCAAATGAACGGCCTGAGAGTTGAGGACACGGCCATCTATTACTGTGCGAGATGGGGTGCCCACTTCAACTACT  270
V  94.8% (235/248)  IGHV3-30*03  227  ............A.............A.........C............TG.G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-16*01  17   --------------------------------------------------------------------.....-----------------  21
J  100.0% (53/53)   IGHJ2*01     1    -------------------------------------------------------------------------------------.....  5

                                      ------------->                                  
                                      W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_164    271  GGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  318
J  100.0% (53/53)   IGHJ2*01     6    ................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_44082

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           349     3e-98
IGHD3-16*01                                                                                           18.0    0.65 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	283	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	69	5	0	93.2
CDR1-IMGT	76	99	24	17	7	0	70.8
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	282	114	95	13	6	83.3
CDR3-IMGT (germline)	283	288	6	6	0	0	100
Total	N/A	N/A	293	260	27	6	88.7


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P  
                    Query_165    2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCC  91
V  88.7% (260/293)  IGHV5-51*03  2    ....G.....G................................................T.....A....T..........GC..TA..A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      R  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  
                    Query_165    92   GTTATTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACA  181
V  88.7% (260/293)  IGHV5-51*03  92   .C..C........C.......................................................G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D  
                    Query_165    182  GTCCGGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACA  265
V  88.7% (260/293)  IGHV5-51*03  182  .C...T.....C.A...................C...C........CAGCACC.C...............C..C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S  
                    Query_165    266  CTGCCATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCTT  355
V  88.7% (260/293)  IGHV5-51*03  272  .C.....G........T......-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  91.7% (11/12)    IGHD3-16*01  18   ------------------------........T...------------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    -------------------------------------------......T......G.................A...............  47

                                         
                                      S  
                    Query_165    356  CAG  358
J  94.0% (47/50)    IGHJ3*01     48   ...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_79879

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ2*01                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTACTATAATCCTAGTGGTTTTTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACTATAATCCTAGTGGTTTTTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGFYGYWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  N  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_166    1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAATAATTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ...........................G............G..G...C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  D  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_166    91   TGGATTGGGGACATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  .........T.T..............................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  *  A  R  D  Y  Y  N  P  S  G  F  Y 
                    Query_166    181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGAGCGAGAGATTACTATAATCCTAGTGGTTTTTAC  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............................................G........T........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.0% (21/25)    IGHD3-22*01  4    -----------------------------------------------------------------.......G..AG........A....  28

                                      -------------------->                                  
                                       G  Y  W  Y  F  D  L  W  G  R  G  A  L  V  T  V  S  S  
                    Query_166    271  GGGTACTGGTACTTCGATCTCTGGGGCCGTGGCGCCCTGGTCACTGTCTCCTCAG  325
J  98.1% (51/52)    IGHJ2*01     2    ---..............................A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_9810

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           12.2    33   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	44	6	0	88
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	47	4	0	92.2
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	100	14	0	87.7
CDR3-IMGT (germline)	261	268	8	7	1	0	87.5
Total	N/A	N/A	268	236	32	0	88.1


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  
                    Query_167    1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACTTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCC  90
V  88.1% (236/268)  IGHV4-34*01  26   ........T.......T....................C........CTA..G..G......C.................C...A.C....  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  
                    Query_167    91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCA  180
V  88.1% (236/268)  IGHV4-34*01  116  ................G......................A............CA.C.AC......C..T......A..............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      M  S  V  D  T  S  K  K  Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_167    181  TGTCAGTAGACACGTCCAAGAAACAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGG  270
V  88.1% (236/268)  IGHV4-34*01  206  .A....................C..GT...........C..A......T.....................G.....C......A....--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------------------.  13

                                      -------CDR3-IMGT--------------->                                  
                                      G  W  R  R  Q  R  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_167    271  GCTGGCGAAGACAGCGCAACTGGTTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  336
D  100.0% (6/6)     IGHD6-19*01  14   .....-------------------------------------------------------------  18
J  98.0% (49/50)    IGHJ5*02     2    ----------------..............................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_79877

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           338     5e-95
IGHD3-10*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGGTTCGAGCAGTTATT	CCTTCGCGCG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTTCGAGCAGTTATTCCTTCGCGCGCTACGGTATGGACGTC	ARDGSSSYSFARYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_168    1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACTTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-48*03  47   ....................G................C....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  G  G  G  R  T  I  Y  Y  A  D  S  V  K  G  R  F  T  L  S  R  D  N  T  
                    Query_168    91   AGTGGGTTTCATACATTAGTGGCGGTGGAAGAACCATTTACTACGCAGACTCTGTGAAGGGCCGATTCACCTTGTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-48*03  137  ....................A.TA....T..T.....A.................................A.C............G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  T  A  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  S  S  Y  S  
                    Query_168    181  AGACCGCTCTGCATCTACAAATGAACAGCCTGAGAGCCGAAGACACGGCTGTTTATTACTGTGCGAGAGATGGTTCGAGCAGTTATTCCT  270
V  93.2% (233/250)  IGHV3-48*03  227  ...A.T.A...T....G.......................G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.2% (15/17)    IGHD3-10*01  10   ----------------------------------------------------------------------.......G.G.......---  26

                                      GT-------------------->                                 
                                      F  A  R  Y  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_168    271  TCGCGCGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  326
J  98.0% (48/49)    IGHJ6*02     14   -------......................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_79876

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           369     2e-104
IGHD2-2*01                                                                                            19.9    0.18  
IGHJ6*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGGGCTGCATCTTGCAGCG	GTACTAGCTGCTA	CGATTTAGG	CGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGGGCTGCATCTTGCAGCGGTACTAGCTGCTACGATTTAGGCGGAATGGACGTC	ARRAASCSGTSCYDLGGMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	69	70	66	3	1	94.3
CDR1-IMGT	70	93	24	21	3	0	87.5
FR2-IMGT	94	144	51	49	2	0	96.1
CDR2-IMGT	145	168	24	22	2	0	91.7
FR3-IMGT	169	283	115	103	11	1	89.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	290	267	21	2	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L   C  S  L  E  Q  S  *  K  S  R  G  S  L  *  R  S  P  V  W  V  L  D  T  T  L  P  N  
                    Query_169    1    GCAGCTG-TGCAGTCTGGAGCAGAGCTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCTGGGTTCTGGATACAACTTTACCAAATA  89
V  92.1% (267/290)  IGHV5-51*03  6    .......G.................G...................................AA..............G........GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                      T  G  S  P  G  C  A  R  C  P  G  K  A  W  S  G  W  G  P  S  I  L  L  T  L  I  P  D  T  A  
                    Query_169    90   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGACCATCTATCCTTCTGACTCTGATACCCGATACAGCCC  179
V  92.1% (267/290)  IGHV5-51*03  96   ........G............................................T..........GG.............A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                      R  P  F  Q  G  Q  V  T  I  S  V  D  K  S  L  S  I  A  Y  L  Q  W  S  S  L  R  G  S  D  T  
                    Query_169    180  GTCCTTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCCTCTCCATCGCCTATCTGCAGTGGAGCAGCCTGAGGGGCTCGGACACCG  269
V  92.1% (267/290)  IGHV5-51*03  186  ....-.........................C..........A..AG..C......C...................A..C...........  274
                                        S   F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-------------------------CDR3-IMGT------------------------>                
                                      A  T  Y  Y  C  A  R  R  A  A  S  C  S  G  T  S  C  Y  D  L  G  G  M  D  V  W  G  H  G  T  
                    Query_169    270  CCACTTATTACTGTGCGAGAAGGGCTGCATCTTGCAGCGGTACTAGCTGCTACGATTTAGGCGGAATGGACGTCTGGGGCCACGGGACCA  359
V  92.1% (267/290)  IGHV5-51*03  275  ...TG...............----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  92.3% (12/13)    IGHD2-2*01   15   ---------------------------------------....C........--------------------------------------  27
J  93.5% (43/46)    IGHJ6*02     17   -------------------------------------------------------------...T.................A.......  45

                                                       
                                      T  V  I  V  S  S 
                    Query_169    360  CGGTCATCGTCTCCTCA  376
J  93.5% (43/46)    IGHJ6*02     46   ......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_79875

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           283     1e-78
IGHD6-13*01                                                                                           18.0    0.62 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTGGT	CAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTGGTCAGCAGCTGACTGACTAC	ARDSGQQLTDY	273	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	23	1	0	95.8
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	125	24	23	1	0	95.8
FR3-IMGT	126	272	147	111	3	33	75.5
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	265	225	7	33	84.9


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  R  A  P  G  R  G  L  E  W  V  S  S  I  
                    Query_170    16   GTGCAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCGGGCTCCAGGGAGGGGGCTGGAGTGGGTCTCATCCATTA  105
V  84.9% (225/265)  IGHV3-21*01  65   ............................C......................A...........A..........................  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><--------------------------------------------------------------------F
                                      S  S  S  S  S  H  I  Y  Y  G  D  S  V  K  G  R  F  T  Y  Y  A  D  S  V  K  G  R  F  T  I  
                    Query_170    106  GTAGTAGTAGTAGTCACATATATTATGGAGACTCAGTGAAGGGCCGATTCACCTATTACGCAGACTCAGTGAAGGGCCGATTCACCATCT  195
V  84.9% (225/265)  IGHV3-21*01  155  ..............T.....---------------------------------..C..................................  211
                                      S  S  S  S  S  Y  I                                   Y  Y  A  D  S  V  K  G  R  F  T  I  

                                      R3-IMGT---------------------------------------------------------------------><-----------C
                                      S  R  D  D  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  
                    Query_170    196  CCAGAGACGACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGATTCTG  285
V  84.9% (225/265)  IGHV3-21*01  212  ........A..........................................................G.................-----  296
                                      S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R        

                                      DR3-IMGT----------->                                  
                                      G  Q  Q  L  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_170    286  GTCAGCAGCTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  100.0% (9/9)     IGHD6-13*01  9    --.........-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_79873

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           386     1e-109
IGHJ3*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GGGGCCTTCAA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCTTCAAGATGCTTTTGATATC	ARGGLQDAFDI	289	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	70	4	0	94.6
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	174	21	16	5	0	76.2
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	291	269	22	0	92.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  
                    Query_171    5    AGGTTCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTTAGGCTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGCG  94
V  92.4% (269/291)  IGHV3-53*01  2    ....G.........G.....................................G..A................................TA  91
                                         V  Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  

                                      T------><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------
                                      A  Y  F  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  I  M  Y  T  G  G  F  T  Y  Y  A  
                    Query_171    95   CCTACTTCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTAGAGTGGGTCTCAATTATGTATACCGGTGGATTCACATACTACGCGG  184
V  92.4% (269/291)  IGHV3-53*01  92   G.A...A.....G...........................G..G............G....T....G......TAG............A.  181
                                      S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  N  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  
                    Query_171    185  ACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAACAACACCCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGG  274
V  92.4% (269/291)  IGHV3-53*01  182  ...........................................G.....G........................................  271
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  

                                      -------------><-----------CDR3-IMGT----------->                                  
                                      A  V  Y  Y  C  A  R  G  G  L  Q  D  A  F  D  I  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_171    275  CCGTCTATTACTGTGCGAGAGGGGGCCTTCAAGATGCTTTTGATATCTGGGGCCAAGGCACAAGGGTCACCGTCTCTTCAG  355
V  92.4% (269/291)  IGHV3-53*01  272  ....G................------------------------------------------------------------  292
                                      A  V  Y  Y  C  A  R                                                              
J  95.9% (47/49)    IGHJ3*02     2    --------------------------------..........................G....T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_106848

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           358     4e-101
IGHD6-19*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAACT	CAGTGGCTGG	ATTCGGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACTCAGTGGCTGGATTCGGGGTACTTTGACTAC	ARGTQWLDSGYFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_172    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAGCTATGGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-21*01  47   ...........................................T......A.......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  T  S  S  Y  I  Y  Y  A  D  S  L  E  G  R  F  T  I  S  R  D  N  A  
                    Query_172    91   AGTGGGTCTCATATATTAGTAGTACTAGTAGTTACATATACTACGCAGACTCACTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (239/249)  IGHV3-21*01  137  ............CC..........G............................G..A.................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  D  L  Q  M  N  S  L  R  A  E  D  T  A  V  C  Y  C  A  R  G  T  Q  W  L  D  S  
                    Query_172    181  AGAACTCACTGGATCTGCAAATGAACAGCCTGCGAGCCGAGGACACGGCTGTGTGTTACTGTGCGAGAGGAACTCAGTGGCTGGATTCGG  270
V  96.0% (239/249)  IGHV3-21*01  227  ...........T....................A.....................A..............---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD6-19*01  9    --------------------------------------------------------------------------..........------  18

                                      ------------->                                  
                                      G  Y  F  D  Y  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_172    271  GGTACTTTGACTACTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  318
J  97.8% (45/46)    IGHJ4*02     3    --............................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_79870

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*08                                                                                            212     5e-57
IGHD3-16*02                                                                                           21.8    0.044
IGHJ3*01                                                                                              58.4    1e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*08	IGHD3-16*02	IGHJ3*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTTTTTATCGAAGACCCCGCGTAG	GTTTGGGGGAATTTTCG	CCGCAATCACGATAGCTGTA	ATGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTTTTTATCGAAGACCCCGCGTAGGTTTGGGGGAATTTTCGCCGCAATCACGATAGCTGTAATGTC	ARGLFIEDPA*VWGNFRRNHDSCNV	240	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	42	9	0	82.4
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	83	31	0	72.8
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	189	54	0	77.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E  
                    Query_173    4    CCCTGAGACTCTCCTGTACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAGT  93
V  77.8% (189/243)  IGHV4-4*08   50   .....TCC...A....C.....C.......G.......A...G..........AG......C........C.......A...........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  F  F  F  I  N  G  S  T  P  Y  N  P  S  V  R  P  R  V  P  L  S  G  D  L  A  R  N  
                    Query_173    94   GGCTTGGCTTCTTCTTCATCAATGGGAGCACCCCCTACAACCCCTCCGTCAGGCCTCGTGTCCCCCTATCCGGAGACCTGGCTAGGAATC  183
V  77.8% (189/243)  IGHV4-4*08   140  ..A....G.ATA...AT.C..G..........AA.............C...A.AG...A...A..A......T....AC.T.C.A...C.  229
                                      W  I  G  Y  I  Y  T  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------------------C
                                      Q  L  S  L  N  L  I  D  E  T  A  A  D  T  A  T  S  F  C  A  R  G  L  F  I  E  D  P  A  *  
                    Query_173    184  AGTTGTCCCTCAACCTGATCGATGAGACCGCTGCGGACACGGCCACATCTTTCTGCGCGAGAGGCCTTTTTATCGAAGACCCCGCGTAGG  273
V  77.8% (189/243)  IGHV4-4*08   230  ....C.....G..G....G.TC..T......C..A.........GTG.A..A...T.......---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  88.2% (15/17)    IGHD3-16*02  14   -----------------------------------------------------------------------------------------.  14

                                      DR3-IMGT-------------------------------->                                  
                                      V  W  G  N  F  R  R  N  H  D  S  C  N  V  W  G  Q  G  T  P  V  S  V  S  S  
                    Query_173    274  TTTGGGGGAATTTTCGCCGCAATCACGATAGCTGTAATGTCTGGGGCCAAGGGACACCGGTCTCCGTCTCTTCAG  348
D  88.2% (15/17)    IGHD3-16*02  15   .........G..A...-----------------------------------------------------------  30
J  92.3% (36/39)    IGHJ3*01     12   ------------------------------------....................AT....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_237858

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           346     2e-97
IGHD1-20*01                                                                                           12.2    36   
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-20*01	IGHJ4*02	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TAGGGGGGGGGGGGGGC	TATAAC	ACTGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAGGGGGGGGGGGGGGCTATAACACTGCTTTTGACCTC	ASRGGGGL*HCF*P	289	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	18	6	0	75
FR3-IMGT	175	288	114	93	21	0	81.6
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	293	257	36	0	87.7


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  P  S  S 
                    Query_174    1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGGCCCCTCCAGC  90
V  87.7% (257/293)  IGHV1-69*06  1    .......................G.....G.................C.......................T.........A...T....  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  T  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  S  F  R  A  T  T  N 
                    Query_174    91   AGCTACACTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTTCCTTTCGTGCAACCACCAAC  180
V  87.7% (257/293)  IGHV1-69*06  91   .....TG..A...........................................................AT....G..A..G.A.A.T..  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  E  F  Q  G  R  V  T  I  T  A  D  K  A  T  N  A  A  Y  M  E  F  N  S  R  R  A  D  D 
                    Query_174    181  GCACAGGAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAAGCCACGAACGCGGCTTACATGGAGTTTAACAGCCGGAGGGCGGACGAC  270
V  87.7% (257/293)  IGHV1-69*06  181  ......A...................................T......G.A.A..C.........C.G.G.....T...AT.T..G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------CDR3-IMGT---------------->                             
                                       T  A  L  F  F  R  A  S  R  G  G  G  G  L  *  H  C  F  *  P  R  G  P  G  N  P  G  H  R  L 
                    Query_174    271  ACGGCCCTATTTTTCCGTGCGAGTAGGGGGGGGGGGGGGCTATAACACTGCTTTTGACCTCGGGGGCCGGGGAACCCTGGTCACCGTCTC  360
V  87.7% (257/293)  IGHV1-69*06  271  ......G.G.A..A.T.......-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (6/6)     IGHD1-20*01  3    ----------------------------------------......--------------------------------------------  8
J  90.7% (39/43)    IGHJ4*02     6    ----------------------------------------------------......TA.T......A.....................  43

                                           
                                       L   
                    Query_174    361  CTCAG  365
J  90.7% (39/43)    IGHJ4*02     44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_301310

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACATG	ATTACCATGAT	TCCA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAACATGATTACCATGATTCCAGATGCTTTTGATATC	ARDNMITMIPDAFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  S  S  I  N  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  A 
                    Query_175    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTAGCTCCATCAACAGTGGAGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGCC  90
V  94.4% (237/251)  IGHV4-31*03  49   ..............................G.........G......T........................................G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  D  S  G  G  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_175    91   CTGGAGTGGATTGGATACATCTATGACAGTGGGGGCACCTCCTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCACTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ..............G.........T........A......A...........................T.........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  D  N  M  I  T  M  I 
                    Query_175    181  AGGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACTGTCGCGGACACGGCCGTATATTACTGTGCGAGAGATAACATGATTACCATGATT  270
V  94.4% (237/251)  IGHV4-31*03  229  .A...................C...............C...............G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD3-22*01  3    ------------------------------------------------------------------------------.....T.....-  13

                                      ----------------->                                  
                                       P  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_175    271  CCAGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  100.0% (49/49)   IGHJ3*02     2    ---.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_301313

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD6-19*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TTCCTCT	TGGCTGG	GACC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATTCCTCTTGGCTGGGACCTGATGCTTTTCAAATC	ARDSSWLGPDAFQI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_176    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGAAGTTACTACTGGAATTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ...............................G.........T.............GC.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  S  G  T  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  G  D  T  S  K  N 
                    Query_176    91   TGGATTGGGTATATGTATTACAGTGGGACTACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGGAGACACGTCTAAGAAC  180
V  93.1% (228/245)  IGHV4-59*01  139  ..............C.............GC.....................A.....................T.........C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  F  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  L  G  P  D  A 
                    Query_176    181  CAATTTTTCCTGACGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGGGATTCCTCTTGGCTGGGACCTGATGCT  270
V  93.1% (228/245)  IGHV4-59*01  229  ..G..C.C.....A.C.....................................C........A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD6-19*01  12   ------------------------------------------------------------------------.......-----------  18
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------------------.......  7

                                      -------->                                  
                                       F  Q  I  W  G  Q  G  T  I  V  T  V  S  S  
                    Query_176    271  TTTCAAATCTGGGGCCAGGGGACAATTGTCACCGTGTCTTCAG  313
J  90.0% (45/50)    IGHJ3*02     8    ...G.T...........A........G........C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_172378

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           316     2e-88
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGG	AGCAGCAGCTGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGGAGCAGCAGCTGGTTGACTAC	ARDLEQQLVDY	235	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	10	1	0	90.9
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	120	24	17	4	3	70.8
FR3-IMGT	121	234	114	111	3	0	97.4
CDR3-IMGT (germline)	235	242	8	8	0	0	100
Total	N/A	N/A	232	219	10	3	94.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  
                    Query_177    14   GTGCAGCCTCAGGATTCACCTTCAGTAGTTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTA  103
V  94.4% (219/232)  IGHV3-21*01  65   ..........T.................C.....C.......................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  T  T  T     Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  V  Y  L  
                    Query_177    104  GCACTACTACT---TACATATACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCAGTGTATTTGC  190
V  94.4% (219/232)  IGHV3-21*01  155  .T.G..G..G.AGT..............A...................................................C.....C...  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-----------CDR3-IMGT----------->             
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  E  Q  Q  L  V  D  Y  W  G  Q  G  
                    Query_177    191  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGGAGCAGCAGCTGGTTGACTACTGGGGCCAGGGAA  280
V  94.4% (219/232)  IGHV3-21*01  245  ....................................................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (12/12)   IGHD6-13*01  7    ---------------------------------------------------------............---------------------  18
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------.....................  27

                                                           
                                      T  L  V  T  V  S  S  
                    Query_177    281  CCCTGGTCACCGTCTCCTCAG  301
J  100.0% (42/42)   IGHJ4*02     28   .....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_301315

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           363     1e-102
IGHD3-10*01                                                                                           10.3    121   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGACGGTTTAGCGATGGCCGTCCGA	CGGGG	N/A	CTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGACGGTTTAGCGATGGCCGTCCGACGGGGCTTTAATTAC	AKDDGLAMAVRRGFNY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_178    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-30*18  47   ...................................................G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  H  D  G  I  N  K  Y  Y  P  D  S  V  K  G  R  F  T  I  S  R  G  N  S  
                    Query_178    91   AGTGGGTGGCAGTTATATCACACGATGGAATTAATAAATACTATCCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGGCAATTCCA  180
V  96.4% (241/250)  IGHV3-30*18  137  ....................T.T.......G.............G....................................A........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  S  V  Y  Y  C  A  K  D  D  G  L  A  M  A  
                    Query_178    181  AGAACACCCTGTATCTGCAAATGGACAGCCTGAGAGCTGAGGACACGTCTGTGTATTACTGTGCGAAAGATGACGGTTTAGCGATGGCCG  270
V  96.4% (241/250)  IGHV3-30*18  227  .......G...............A.......................G......................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      T------------------>                                  
                                      V  R  R  G  F  N  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_178    271  TCCGACGGGGCTTTAATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (5/5)     IGHD3-10*01  15   -----.....--------------------------------------------  19
J  95.5% (42/44)    IGHJ4*02     5    ----------....G.C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_101309

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           316     2e-88
IGHD2-21*01                                                                                           10.3    124  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTC	GTGAT	CGGTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCGTGATCGGTGACTACTTTGACCAA	ARHVVIGDYFDQ	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  D  A  S  I  S  S  S  R  Y  Y  W  G  W  I  R  *  P  P  G  K  G  
                    Query_179    4    CCCTGAGACTCTCCTGTACTGTCTCTGATGCCTCCATCAGCAGTAGTAGATACTATTGGGGCTGGATCCGCTAGCCCCCAGGGAAGGGGC  93
V  90.4% (226/250)  IGHV4-39*01  50   .....TCC...A....C..........G..G..................T.....C...............C..................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  H  I  G  S  T  F  Y  K  Q  S  L  K  T  R  V  T  I  S  I  N  S  S  
                    Query_179    94   TGGAGTGGATTGGGAGTATTTATCATATTGGGAGCACCTTCTACAAACAGTCCCTCAAGACTCGAGTCACCATATCCATAAACTCGTCCA  183
V  90.4% (226/250)  IGHV4-39*01  140  ...................C...T...G...........A......C.C...........G................G..G..A......  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  H  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  H  V  V  I  G  D  Y  
                    Query_179    184  AGCACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTATATATTACTGTGCGAGACATGTCGTGATCGGTGACTACT  273
V  90.4% (226/250)  IGHV4-39*01  230  ..A...............A...............................G.G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-21*01  15   --------------------------------------------------------------------------.....-----------  19
J  91.7% (44/48)    IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  Q  W  G  Q  G  S  L  G  T  V  S  S  
                    Query_179    274  TTGACCAATGGGGCCAGGGATCCCTGGGCACCGTCTCCTCAG  315
J  91.7% (44/48)    IGHJ4*02     7    .....T.C............A......T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_301317

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           422     2e-120
IGHD3-16*01                                                                                           12.2    37    
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGA	AATTGGTAACACCTAATTGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTC	ARRGKLVTPNWDYGMDV	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	294	282	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_180    1    CAGGTCCAGCTTGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  90
V  95.9% (282/294)  IGHV1-18*04  1    .....T.....G.............C................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  C  Y  N  G  N  T  K  Y 
                    Query_180    91   AACTACGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGTTGTTACAATGGTAACACAAAGTAT  180
V  95.9% (282/294)  IGHV1-18*04  91   .G...............................................................CGC..................C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  L  K  H  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_180    181  GCACTGAAGCACCAGGGCAGAGTCACCATGACCACAGACACATCGACGAGCACAGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGAC  270
V  95.9% (282/294)  IGHV1-18*04  181  ....A.....T.................................C..............C..............................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><--------------------CDR3-IMGT-------------------->                     
                                       T  A  V  Y  Y  C  A  R  R  G  K  L  V  T  P  N  W  D  Y  G  M  D  V  W  G  Q  G  T  T  V 
                    Query_180    271  ACGGCCGTGTATTACTGTGCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTC  360
V  95.9% (282/294)  IGHV1-18*04  271  ........................------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD3-16*01  18   -------------------------......-----------------------------------------------------------  23
J  100.0% (50/50)   IGHJ6*02     13   ----------------------------------------------------......................................  50

                                                  
                                       T  V  S  S 
                    Query_180    361  ACCGTCTCCTCA  372
J  100.0% (50/50)   IGHJ6*02     51   ............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_237850

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           321     7e-90
IGHD2-2*01                                                                                            10.3    124  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGCC	CCAGC	GCAT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCCCCAGCGCATACTTCTTTGACTTC	ARVSPSAYFFDF	261	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	20	4	0	83.3
FR2-IMGT	75	125	51	44	7	0	86.3
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	100	14	0	87.7
CDR3-IMGT (germline)	261	267	7	6	1	0	85.7
Total	N/A	N/A	267	236	31	0	88.4


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  
                    Query_181    1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGAC  90
V  88.4% (236/267)  IGHV4-59*01  26   ................T.......................................T........A.....T.C.........A....G.  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  
                    Query_181    91   AACCCCCAGGAAAGGGACTGGAGTGGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCA  180
V  88.4% (236/267)  IGHV4-59*01  116  .G........G...................GGT....C...........G.G..C...C................A..G...........  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      M  S  F  D  T  S  K  R  Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  
                    Query_181    181  TGTCCTTTGACACGTCCAAGAGGCAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCA  270
V  88.4% (236/267)  IGHV4-59*01  206  .A..AG.A.............AC.............A....AGC..........................G............A...---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      ----CDR3-IMGT------------>                                
                                      S  P  S  A  Y  F  F  D  F  W  G  R  G  T  L  V  V  V  S  S
                    Query_181    271  GCCCCAGCGCATACTTCTTTGACTTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  328
D  100.0% (5/5)     IGHD2-2*01   18   ---.....--------------------------------------------------  22
J  89.1% (41/46)    IGHJ4*02     1    ------------...A........A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_237851

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            341     5e-96
IGHD3-3*01                                                                                            12.2    32   
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ACCCGTGTGATGCC	TACCATCTTTGG	TG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACCCGTGTGATGCCTACCATCTTTGGTGACTACGGTATGGACGTC	ARTRVMPTIFGDYGMDV	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  D  S  I  T  S  S  H  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_182   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCATCACCAGTAGTCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  94.3% (232/246)  IGHV4-4*01  49   ...............................G........G.......A.........................................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  R  T  R  V  T  I  S  I  D  K  S  K 
                    Query_182   91   GAGTGGATTGGGGAAATCTATTATAGTGGGACCACGAACTACAATCCGTCCCTCAGGACTCGAGTCACCATATCAATAGACAAGTCCAAG  180
V  94.3% (232/246)  IGHV4-4*01  139  .....................C.........G...C........C..........A..G................G..............  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  T  R  V  M  P  T  I  F 
                    Query_182   181  AATCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTTCTGTGCCAGAACCCGTGTGATGCCTACCATCTTT  270
V  94.3% (232/246)  IGHV4-4*01  229  ..C...............................................G....G......G...------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD3-3*01  5    --------------------------------------------------------------------------------...G..T...  14

                                     -------------------->                                 
                                      G  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_182   271  GGTGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
D  83.3% (10/12)    IGHD3-3*01  15   ..----------------------------------------------------  16
J  100.0% (50/50)   IGHJ6*02    13   ----..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_237852

Length=411
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            367     7e-104
IGHD3-16*02                                                                                           14.1    10    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD3-16*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGGAGAGGTCCCCCC	TTATCGT	CCGAAATGGGTACAGTCATACAGA	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGGAGAGGTCCCCCCTTATCGTCCGAAATGGGTACAGTCATACAGATGGCTCGACCCC	ARVGEVPPYRPKWVQSYRWLDP	289	354	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	67	8	0	89.3
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	46	5	0	90.2
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	101	13	0	88.6
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	265	30	0	89.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  R  E  P  G  A  S  V  T  V  S  C  K  A  S  G  Y  T  F  S 
                    Query_183    1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGGAGCCTGGGGCCTCAGTGACAGTCTCCTGTAAGGCTTCCGGATACACCTTCAGC  90
V  89.8% (265/295)  IGHV1-8*01   1    ...G...................G..........A.A..................AG........C........T.............C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  D  I  N  W  V  R  Q  A  S  G  Q  R  P  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 
                    Query_183    91   AATTATGATATCAACTGGGTGAGACAGGCCAGTGGACAAAGACCTGAGTGGATGGGATGGATGAATCCTAACAGTGGTAACACTGGCTAC  180
V  89.8% (265/295)  IGHV1-8*01   91   .G...................C.........C.......G.G.T.....................C.................A.....T  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  F  Q  D  R  V  T  M  T  R  D  T  S  I  G  T  A  Y  M  Q  L  I  S  L  R  P  E  D 
                    Query_183    181  GCACAGAACTTTCAGGACAGAGTCACCATGACCAGGGACACCTCCATAGGCACAGCCTACATGCAGTTGATAAGCCTGCGACCTGAGGAC  270
V  89.8% (265/295)  IGHV1-8*01   181  ........G..C....G...................A...........A..............G..C...GC......A..T........  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------------------CDR3-IMGT--------------------------->      
                                       T  A  V  Y  Y  C  A  R  V  G  E  V  P  P  Y  R  P  K  W  V  Q  S  Y  R  W  L  D  P  W  G 
                    Query_183    271  ACGGCCGTTTATTACTGTGCGAGAGTGGGAGAGGTCCCCCCTTATCGTCCGAAATGGGTACAGTCATACAGATGGCTCGACCCCTGGGGC  360
V  89.8% (265/295)  IGHV1-8*01   271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD3-16*02  25   -----------------------------------------.......------------------------------------------  31
J  95.7% (44/46)    IGHJ5*02     6    ------------------------------------------------------------------------...T..............  23

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_183    361  CAGGGAACCCTGGTCACCGTCTCGTCAG  388
J  95.7% (44/46)    IGHJ5*02     24   .......................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40288536


Query= Query_237853

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD2-15*01                                                                                           10.3    133   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CGAGAAG	GGTGG	CGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGACACGAGAAGGGTGGCGGGGCGAACGACTAC	VRHEKGGGANDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	6	2	0	75
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P  N  Y
                    Query_184    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCCAATTA  90
V  93.8% (273/291)  IGHV5-51*01  6    ....................................C........................................GC...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  A  D  S  D  T  R  Y  S  L
                    Query_184    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAACATCTATCCTGCTGACTCTGACACCAGATACAGTCT  180
V  93.8% (273/291)  IGHV5-51*01  96   .....................................................T...........G.........T...........C.C  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_184    181  GACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACACCGC  270
V  93.8% (273/291)  IGHV5-51*01  186  .T.....C.............................................................C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_184    271  CGTGTATTATTGTGTCAGACACGAGAAGGGTGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  351
V  93.8% (273/291)  IGHV5-51*01  276  .A.......C....CG.....------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                               
D  100.0% (5/5)     IGHD2-15*01  14   ----------------------------.....------------------------------------------------  18
J  97.4% (37/38)    IGHJ4*02     9    -------------------------------------------....................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_237854

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD3-16*01                                                                                           10.3    116  
IGHJ6*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGG	GGTAAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGGTAATTACTACTACGCTTTGGACGTC	ARGGGNYYYALDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_185    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATAACTAATTATTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   ...............................G......C.G..G...C........C........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  F  Y  S  G  I  T  S  Y  T  P  S  L  Q  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_185    91   TGGATTGGCTATATGTTTTACAGTGGGATCACCAGCTACACCCCCTCCCTCCAGAGTCGAGTCACCATGTCAGTCGACACGTCCAAGAAG  180
V  91.4% (223/244)  IGHV4-59*01  139  ........G.....C.A...........G.....A.....A..........A................A.....A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  I  S  L  E  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  N  Y  Y  Y  A  L 
                    Query_185    181  CAGATCTCCCTGGAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGGGGGGGGTAATTACTACTACGCTTTG  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T........A......G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   ----------------------------------------------------------------.....---------------------  22
J  96.3% (52/54)    IGHJ6*02     9    ---------------------------------------------------------------------------..........G.A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_185    271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  96.3% (52/54)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_223266

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATG	GTATTATTCTGATAACAGTGGTTATT	T	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATGGTATTATTCTGATAACAGTGGTTATTTCTTTGACTCC	AREWYYSDNSGYFFDS	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_186    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGCCAGTCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...........................................G.....................G...C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  V  Y  Y  T  G  F  T  D  Y  N  P  S  L  K  S  R  I  T  I  S  L  D  T  S  K  N 
                    Query_186    91   TGGCTTGGGTTTGTCTATTACACTGGATTCACCGACTACAACCCCTCCCTCAAGAGTCGAATCACCATATCACTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ...A......A.A.........G...GAG....A..........................G...........G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  W  Y  Y  S  D  N  S  G 
                    Query_186    181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGAATGGTATTATTCTGATAACAGTGGT  270
V  93.5% (229/245)  IGHV4-59*01  229  .............A.................................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (22/26)    IGHD3-22*01  1    --------------------------------------------------------------------......C.A.....GT......  22

                                      -------------->                                  
                                       Y  F  F  D  S  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_186    271  TATTTCTTTGACTCCTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  319
D  84.6% (22/26)    IGHD3-22*01  23   ....---------------------------------------------  26
J  95.5% (42/44)    IGHJ4*02     5    -----........A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_237856

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43D*01                                                                                          335     4e-94
IGHD1-26*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43D*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAA	GGCAAC	GTATAGTGGGACCTACTA	TCCGAATAG	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGGCAACGTATAGTGGGACCTACTATCCGAATAGTTACTACTACTACAACGCTATGGACGTC	AKATYSGTYYPNSYYYYNAMDV	241	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	126	24	18	6	0	75
FR3-IMGT	127	240	114	113	1	0	99.1
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                       <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                          L  S  L  T  C  A  A  S  G  F  T  S  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  A  L  E  
                    Query_187     2    CCCTGTCCCTCACCTGCGCAGCCTCTGGATTCACCTCTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCGGGGAAGGCTCTCGAGT  91
V  93.9% (229/244)  IGHV3-43D*01  50   .....AGA...T....T...................T............................................G...G....  139
                                          L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  

                                       ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                       W  V  S  L  I  T  W  G  P  V  S  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  K  
                    Query_187     92   GGGTCTCTCTTATTACTTGGGGTCCTGTTAGCACATACTATGCAGACTCTGTGAGGGGTCGATTCACCATCTCCAGAGACAACAGCAAAA  181
V  93.9% (229/244)  IGHV3-43D*01  140  ...............G.....A.GG..G......C...................A...................................  229
                                       W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                       3-IMGT----------------------------------------------------><----------------------------CD
                                       N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  A  T  Y  S  G  T  Y  Y  
                    Query_187     182  ACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACCGCCTTGTATTACTGTGCAAAGGCAACGTATAGTGGGACCTACTATC  271
V  93.9% (229/244)  IGHV3-43D*01  230  ................................................................--------------------------  293
                                       N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                             
D  94.4% (17/18)    IGHD1-26*01   2    ----------------------------------------------------------------------...........G......--  19

                                       R3-IMGT--------------------------->                                 
                                       P  N  S  Y  Y  Y  Y  N  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_187     272  CGAATAGTTACTACTACTACAACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  339
J  96.7% (59/61)    IGHJ6*02      2    -------.............T...G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_237857

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            318     5e-89
IGHD6-19*01                                                                                           21.8    0.039
IGHJ5*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCAGTGGCTGG	CTAC	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCAGTGGCTGGCTACTCGACGTC	VRGSGWLLDV	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  N  T  K  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_188    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATGTTTAATACTAAATGGATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTG  90
V  90.8% (226/249)  IGHV3-7*01   47   ....................................CC....G..GCT.T.......GC.............................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  H  N  A  
                    Query_188    91   AGTGGGTGGCCATCATAAAGCAGGATGGAAGTGAAAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGACACAACGCCA  180
V  90.8% (226/249)  IGHV3-7*01   137  ............A.........A...........G.............................................G.........  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      N  N  S  V  F  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  V  R  G  S  G  W  L  L  D  
                    Query_188    181  ATAATTCAGTGTTTCTGCAAATGAACTCCCTGACAGCCGAGGACACGGCTGTGTATTATTGTGTGAGAGGCAGTGGCTGGCTACTCGACG  270
V  90.8% (226/249)  IGHV3-7*01   227  .G..C...C...A.............AG.....G........................C....C.....---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-19*01  8    ---------------------------------------------------------------------...........----------  18
J  88.1% (37/42)    IGHJ5*02     10   ------------------------------------------------------------------------------------.....C  15

                                      ->                                  
                                      V  W  G  Q  G  A  M  V  I  V  S  S  
                    Query_188    271  TCTGGGGCCAGGGAGCCATGGTCATCGTCTCCTCAG  306
J  88.1% (37/42)    IGHJ5*02     16   C.............A..C......C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_320336

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           282     4e-78
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	217	27	6	86.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_189    4    CCCTGAGACTCTCCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.8% (217/250)  IGHV4-34*01  50   .....TCC...A..........C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_189    94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.8% (217/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_189    184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.8% (217/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_189    274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_9817

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAAA	CTTTCGAC	AGTAGTGGTTAT	CGGAC	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAACTTTCGACAGTAGTGGTTATCGGACACAACTGGTTGGACCCC	GKLSTVVVIGHNWLDP	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  H  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_190    1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACATTTAGTCACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.7% (225/248)  IGHV3-23*01  47   ....................G................C.....CAG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  L  S  G  S  G  L  S  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_190    91   AGTGGGTCTCCGCTCTTAGTGGTAGTGGTCTTAGCACTTACTATACAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  90.7% (225/248)  IGHV3-23*01  137  ..........A...A..............GG......A.....CG...................G.....................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  N  T  L  Y  L  Q  M  E  S  L  S  A  D  D  T  A  V  Y  F  C  G  K  L  S  T  V  V  V  I  
                    Query_190    181  ACAACACGTTGTATCTGCAAATGGAGAGCCTGAGCGCCGACGACACGGCCGTATATTTCTGTGGGAAACTTTCGACAGTAGTGGTTATCG  270
V  90.7% (225/248)  IGHV3-23*01  227  .G......C..............A.C........A.....G................A.....C....----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD3-22*01  14   ----------------------------------------------------------------------------............--  25

                                      T------------------>                                  
                                      G  H  N  W  L  D  P  W  G  P  G  T  L  V  T  V  S  S  
                    Query_190    271  GACACAACTGGTTGGACCCCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  324
J  96.1% (49/51)    IGHJ5*02     1    ---..........C.............A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_271897

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           344     6e-97
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGGGGA	AGCAGTGGCTGGTAC	TGGAGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATGGGGGAAGCAGTGGCTGGTACTGGAGTTTTGACTAT	VKDGGSSGWYWSFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  I  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_191    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATATTTATGGCATCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-30*18  47   ..........................................G..GC........G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  V  S  Y  D  G  G  N  K  Y  Y  T  D  S  V  R  G  R  F  S  I  S  R  D  N  S  
                    Query_191    91   AGTGGGTGGCATTTGTTTCATATGATGGAGGTAATAAATACTATACAGACTCCGTGAGGGGCCGATTCTCCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-30*18  137  ...........G..A.A............A..............G............A..........A.....................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  F  M  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  K  D  G  G  S  S  G  W  
                    Query_191    181  AGAACACGCTGTTTATGCAAATGAACAGCCTGAGAGCTGACGACACGGCTGTGTATTACTGTGTGAAAGATGGGGGAAGCAGTGGCTGGT  270
V  94.0% (235/250)  IGHV3-30*18  227  ............A.C.........................G......................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD6-19*01  7    -----------------------------------------------------------------------------.............  19

                                      ---------------->                                  
                                      Y  W  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_191    271  ACTGGAGTTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (15/15)   IGHD6-19*01  20   ..-------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    --------........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_320337

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           413     2e-117
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTTTATTACCT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTATTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	71	0	0	100
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	292	278	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  
                    Query_192    6    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTTCCACTT  95
V  95.2% (278/292)  IGHV5-51*01  5    ...............................................................................C...A...GC.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  
                    Query_192    96   ATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAGTC  185
V  95.2% (278/292)  IGHV5-51*01  95   .C.......G.................................................T.................A..........C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  
                    Query_192    186  CGTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCG  275
V  95.2% (278/292)  IGHV5-51*01  185  ........C.....................C...............C...........................A...............  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------------CDR3-IMGT----------------------->                   
                                      A  I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  
                    Query_192    276  CCATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTATTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGG  365
V  95.2% (278/292)  IGHV5-51*01  275  ....G.................--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  85.7% (12/14)    IGHD1-26*01  4    ------------------------------...G....A.....----------------------------------------------  17
J  98.0% (48/49)    IGHJ6*02     14   -------------------------------------------------------...................................  48

                                                    
                                      V  T  V  S  S 
                    Query_192    366  TCACCGTCTCGTCA  379
J  98.0% (48/49)    IGHJ6*02     49   ..........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_9816

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           285     4e-79
IGHD6-13*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CTTC	TATAACAGCAGTTGG	GTACTCGA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTTCTATAACAGCAGTTGGGTACTCGATGACTTC	ARDFYNSSWVLDDF	232	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	10	1	0	90.9
CDR1-IMGT	19	42	24	22	2	0	91.7
FR2-IMGT	43	93	51	48	3	0	94.1
CDR2-IMGT	94	117	24	16	8	0	66.7
FR3-IMGT	118	231	114	103	11	0	90.4
CDR3-IMGT (germline)	232	239	8	8	0	0	100
Total	N/A	N/A	232	207	25	0	89.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  R  I  Y  S  M  N  W  V  R  Q  A  P  G  K  E  L  E  W  V  S  S  I  
                    Query_193    8    GTGCAGTCTCTGGATTCACCTTCAGAATCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGAACTGGAGTGGGTCTCATCGATTA  97
V  89.2% (207/232)  IGHV3-21*01  65   ......C..................T.G......................................GG.................C....  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  G  S  T  H  V  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  K  Q  S  L  Y  L  
                    Query_193    98   GTAGTGGTTCAACTCATGTATATTATGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAATGCCAAGCAATCACTGTATCTGC  187
V  89.2% (207/232)  IGHV3-21*01  155  .....A..AGT.G.T.CA....C..C........A..................A.............C......A.C.............  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      Q  M  H  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  F  Y  N  S  S  W  V  L  D  D  F  W  
                    Query_193    188  AAATGCACAGCCTGAGAGCCGACGACACGGCTGTATACTACTGTGCGAGAGACTTCTATAACAGCAGTTGGGTACTCGATGACTTCTGGG  277
V  89.2% (207/232)  IGHV3-21*01  245  .....A................G...........G..T..............--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  86.7% (13/15)    IGHD6-13*01  4    --------------------------------------------------------....G......C...-------------------  18
J  94.7% (36/38)    IGHJ4*02     8    -------------------------------------------------------------------------------.....A.....  18

                                                                 
                                      G  Q  G  T  L  V  T  V  S  
                    Query_193    278  GCCAGGGGACCCTGGTCACCGTCTCCT  304
J  94.7% (36/38)    IGHJ4*02     19   .......A...................  45


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_2369

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            383     1e-108
IGHD6-6*01                                                                                            18.0    0.65  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCGTCTCGAC	TATAGGAGCTCG	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCGTCTCGACTATAGGAGCTCGCTTTGACTAC	ARSVSTIGARFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  V  S  V  E  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_194   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGTCTCAGTGGAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  92.4% (267/289)  IGHV1-2*04  6    .........................................C.......A........................................  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       F  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  W  I  N  P  N  T  G  D  T  K  Y  A  Q
                    Query_194   91   CTTTATTCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCATGGATCAACCCTAACACTGGTGACACAAAGTATGCACA  180
V  92.4% (267/289)  IGHV1-2*04  96   ..A...G...........................................G.................G.....G......C........  185
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  D  W  V  I  T  T  K  D  T  S  I  T  T  A  Y  M  E  I  T  R  L  T  S  D  D  T  A
                    Query_194   181  GAAGTTTAAGGATTGGGTCATCACGACTAAGGACACGTCCATCACCACAGCCTACATGGAGATCACCAGACTGACATCTGACGACACGGC  270
V  92.4% (267/289)  IGHV1-2*04  186  .......C...GC.......C..T...C.G..............G................C.G.G...G....G...............  275
                                       K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                     ------------><--------------CDR3-IMGT-------------->                                
                                       V  Y  F  C  A  R  S  V  S  T  I  G  A  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_194   271  CGTGTATTTCTGTGCGAGATCCGTCTCGACTATAGGAGCTCGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  354
V  92.4% (267/289)  IGHV1-2*04  276  ........A..........-----------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                  
D  91.7% (11/12)    IGHD6-6*01  4    ------------------------------.....C......------------------------------------------  15
J  100.0% (42/42)   IGHJ4*02    5    ------------------------------------------..........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_118288

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           302     3e-84
IGHD2-2*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CCATCCT	AGGATATTGCAGTGGTCCCAGCTGC	GGTGTTTCTGTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCCATCCTAGGATATTGCAGTGGTCCCAGCTGCGGTGTTTCTGTGTTTGACTAC	AKAILGYCSGPSCGVSVFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	221	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  Y  A  M  H  W  V  R  Q  A  P  D  K  G  L  
                    Query_195    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACATTCAGTAAATATGCCATGCACTGGGTCCGCCAGGCTCCCGACAAGGGGCTGG  90
V  88.8% (221/249)  IGHV3-30*18  47   .....................................C.......GC....G........................A.G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  F  D  G  T  Y  K  Y  Y  G  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_195    91   AGTGGGTGGCTGTCATTTCATTTGATGGAACTTACAAATATTATGGAGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  88.8% (221/249)  IGHV3-30*18  137  ..........A..T..A....A........G.A.T.....C....C..........A.................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      R  S  T  F  S  L  Q  M  D  S  L  K  V  E  D  S  A  I  Y  Y  C  A  K  A  I  L  G  Y  C  S  
                    Query_195    181  GGAGCACTTTTTCTCTGCAAATGGACAGCCTGAAAGTTGAGGACTCGGCTATCTATTACTGTGCGAAAGCCATCCTAGGATATTGCAGTG  270
V  88.8% (221/249)  IGHV3-30*18  227  A..A...GC.G.A..........A.........G..C.......A.....G.G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.0% (22/25)    IGHD2-2*01   1    ----------------------------------------------------------------------------.........T...A  14

                                      R3-IMGT------------------------>                                  
                                      G  P  S  C  G  V  S  V  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_195    271  GTCCCAGCTGCGGTGTTTCTGTGTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  336
D  88.0% (22/25)    IGHD2-2*01   15   ..A........-------------------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    -----------------------.....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_118286

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           355     3e-100
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_196    4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGCC  93
V  96.0% (237/247)  IGHV4-31*03  50   .....TCC...A.....................C......C.............................C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_196    94   TGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  96.0% (237/247)  IGHV4-31*03  140  ....G.........T.C.........................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  
                    Query_196    184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCG  273
V  96.0% (237/247)  IGHV4-31*03  230  ...................................................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  100.0% (51/51)   IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_196    274  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (51/51)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_118284

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           375     3e-106
IGHD3-22*01                                                                                           37.2    1e-06 
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAG	TTACTTTGATAGTAGTGGTTAT	GCTCAGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTACTTTGATAGTAGTGGTTATGCTCAGGACGGTATGGACGTC	ARESYFDSSGYAQDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_197    1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (245/250)  IGHV3-21*01  47   .........................C...................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  S  I  S  S  S  S  N  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_197    91   ACTGGGTCTCATCCATTAGTAGTAGTAGTAATTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.0% (245/250)  IGHV3-21*01  137  .G............................G...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  R  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  S  Y  F  D  S  S  
                    Query_197    181  AGAACTCACTGTATCTGCAAATGAACAGGCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAAAGTTACTTTGATAGTAGTG  270
V  98.0% (245/250)  IGHV3-21*01  227  ............................C.........................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.5% (21/22)    IGHD3-22*01  4    -------------------------------------------------------------------------.....A...........  20

                                      IMGT--------------------->                                 
                                      G  Y  A  Q  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_197    271  GTTATGCTCAGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  95.5% (21/22)    IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_118283

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACCTTGACTAC	ARRGYSYGYYYLDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	240	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_198    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.8% (240/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_198    91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCTATAGACACGTCCAAGAAC  180
V  98.8% (240/243)  IGHV4-59*01  139  .......................................................................AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_198    181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  98.8% (240/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_198    271  CTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    T..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_118282

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           427     1e-121
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGCCTACTTTCTTAGTTGGGGTTACTCTGGTA	GTATAACAGCAGCTGG	CGAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTAC	ARHAYFLSWGYSGSITAAGEIDY	283	351	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	69	64	63	1	0	98.4
CDR1-IMGT	70	93	24	21	3	0	87.5
FR2-IMGT	94	144	51	51	0	0	100
CDR2-IMGT	145	168	24	23	1	0	95.8
FR3-IMGT	169	282	114	113	1	0	99.1
CDR3-IMGT (germline)	283	290	8	8	0	0	100
Total	N/A	N/A	285	279	6	0	97.9


Alignments

                                      <---------------------------FR1-IMGT---------------------------><-------CDR1-IMGT------><-
                                        V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  A  T  Y  W  I
                    Query_199    6    GGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTGCCACCTACTGGAT  95
V  97.9% (279/285)  IGHV5-51*01  12   ..............................C........................................G....A...G.........  101
                                        V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W  I

                                      -------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------------
                                        G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P  S  F
                    Query_199    96   CGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCCGTCCTT  185
V  97.9% (279/285)  IGHV5-51*01  102  ......................................................................A...................  191
                                        G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S  F

                                      ------------------------------------FR3-IMGT----------------------------------------------
                                        Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A  M  Y
                    Query_199    186  CCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGCCATGTA  275
V  97.9% (279/285)  IGHV5-51*01  192  ...................................................................A......................  281
                                        Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M  Y

                                      ------><-----------------------------CDR3-IMGT----------------------------->              
                                        Y  C  A  R  H  A  Y  F  L  S  W  G  Y  S  G  S  I  T  A  A  G  E  I  D  Y  W  G  Q  G  T
                    Query_199    276  TTACTGTGCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTACTGGGGCCAGGGAAC  365
V  97.9% (279/285)  IGHV5-51*01  282  ...............---------------------------------------------------------------------------  296
                                        Y  C  A  R                                                                              
D  93.8% (15/16)    IGHD6-13*01  3    -----------------------------------------------.....G..........---------------------------  18
J  100.0% (42/42)   IGHJ4*02     7    --------------------------------------------------------------------......................  28

                                                          
                                        L  V  T  V  S  S  
                    Query_199    366  CCTGGTCACCGTCTCCTCAG  385
J  100.0% (42/42)   IGHJ4*02     29   ....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_141854

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD3-22*01                                                                                           18.0    0.61 
IGHJ2*01                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTCAAACATT	TGATAGTGGTGCTTA	CGAGTTCCAGGACCCT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTCAAACATTTGATAGTGGTGCTTACGAGTTCCAGGACCCTTACTGGTACTTCGATCTC	AKVQTFDSGAYEFQDPYWYFDL	237	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	21	3	0	87.5
FR3-IMGT	123	236	114	111	3	0	97.4
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	231	221	10	0	95.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  R  I  Y  D  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  
                    Query_200    13   GTGCAGTCTCTGGATTCACCTTTAGAATCTATGACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATCA  102
V  95.7% (221/231)  IGHV3-23*01  65   ......C..................C.G.....C......................................................T.  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_200    103  GTGGGAGTGGTGGTACCACATATTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTAC  192
V  95.7% (221/231)  IGHV3-23*01  155  ....T..........G......C.................................................................G.  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><----------------------------CDR3-IMGT--------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  V  Q  T  F  D  S  G  A  Y  E  F  Q  D  
                    Query_200    193  AGATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTTCAAACATTTGATAGTGGTGCTTACGAGTTCCAGGACC  282
V  95.7% (221/231)  IGHV3-23*01  245  .A.................................................---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  86.7% (13/15)    IGHD3-22*01  10   -------------------------------------------------------------.......A...G...--------------  24

                                      ------------------->                                  
                                      P  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  F  S  S  
                    Query_200    283  CTTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTTTCTCCTCAG  336
J  98.1% (51/52)    IGHJ2*01     2    --..........................................G.........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_118280

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*03                                                                                           329     3e-92
IGHD1-26*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	CCCGAATC	GTGGGTGCTAC	CACGG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGACCCGAATCGTGGGTGCTACCACGGACTTTGACTAC	VTRIVGATTDFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	228	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  E  D  R  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_201    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTCGAGGACCGCTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (228/246)  IGHV3-11*03  47   ....................................CC...AGT...TA.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  G  S  S  S  F  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_201    91   AGTGGCTTTCATACATTAGTGGTAGTAGTAGTTTCACAAGTTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.7% (228/246)  IGHV3-11*03  137  .....G..............A............A.....AC..C..............................................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  V  T  R  I  V  G  A  T  T  
                    Query_201    181  GGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCAATTTATTACTGTGTGACCCGAATCGTGGGTGCTACCACGG  270
V  92.7% (228/246)  IGHV3-11*03  227  A................................................CG.G..........C..------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.9% (10/11)    IGHD1-26*01  7    --------------------------------------------------------------------------.....A.....-----  17

                                      ---------->                                  
                                      D  F  D  Y  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_201    271  ACTTTGACTACTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  315
J  97.8% (44/45)    IGHJ4*02     4    ...........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_182586

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           269     2e-74
IGHD3-3*01                                                                                            18.0    0.57 
IGHJ4*01                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGCA	N/A	TTATTATAC	GAGGACCTATCCAC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATTATTATACGAGGACCTATCCACTTGACCAC	ARHYYTRTYPLDH	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	10	11	0	47.6
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	208	36	0	85.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  G  Y  S  W  S  W  I  R  Q  F  P  G  K  G  L  E  
                    Query_202    4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCAGTGGTTACTCCTGGAGTTGGATCCGGCAGTTCCCAGGGAAGGGACTGGAGT  93
V  85.2% (208/244)  IGHV4-59*08  50   .....TCC...A..................G..........A......A......C............CC....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  R  A  H  D  M  K  T  N  Y  N  P  S  L  K  N  R  L  T  I  S  V  D  T  S  R  S  
                    Query_202    94   GGATTGGATATAGGGCTCACGATATGAAGACCAACTACAACCCCTCCCTCAAGAATCGACTCACCATATCAGTGGACACGTCCAGGAGCC  183
V  85.2% (208/244)  IGHV4-59*08  140  .......G....TCTA.T..AG.GG..GC.........................G....G.............A..........A..A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  V  A  L  E  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  H  Y  Y  T  R  T  Y  P  L  
                    Query_202    184  AGGTCGCCCTGGAGTTGACCTCTGTGACCGCCGCAGACACGGCCATATATTATTGTGCGAGGCATTATTATACGAGGACCTATCCACTTG  273
V  85.2% (208/244)  IGHV4-59*08  230  ..T..T.....A..C...G.........................G.G.....C........A..--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (9/9)     IGHD3-3*01   22   ----------------------------------------------------------------.........-----------------  30
J  92.5% (37/40)    IGHJ4*01     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                
                                      D  H  W  G  H  G  I  L  V  T  V  S  S
                    Query_202    274  ACCACTGGGGCCACGGAATCCTGGTCACCGTCTCCTC  310
J  92.5% (37/40)    IGHJ4*01     10   ..T..........A....C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_182585

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           352     3e-99
IGHD6-19*01                                                                                           12.2    33   
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTAAAGACCCCGGAGGGC	GGCTGG	C	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTAAAGACCCCGGAGGGCGGCTGGCACTACTACTACGGCTTGGACGTC	ARVKTPEGGWHYYYGLDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	236	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_203    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTGACTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.5% (236/247)  IGHV3-21*01  47   ....................................C.......AG.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_203    91   AGTGGGTCTCATCCATTAGCAGTGGGAGTAGTTACATATACTACGCAGACTCAGTAAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.5% (236/247)  IGHV3-21*01  137  ...................T...A.T.............................G..................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  I  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  K  T  P  E  G  G  
                    Query_203    181  AGAACTCACTGTATCTGCAAATTAACAGCCTGAGAGCCGACGACACGGCTGTATATTACTGTGCGAGGGTAAAGACCCCGGAGGGCGGCT  270
V  95.5% (236/247)  IGHV3-21*01  227  ......................G.................G...........G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD6-19*01  13   --------------------------------------------------------------------------------------....  16

                                      IMGT--------------------->                                 
                                      W  H  Y  Y  Y  G  L  D  V  W  G  Q  G  I  T  V  T  V  S  S 
                    Query_203    271  GGCACTACTACTACGGCTTGGACGTCTGGGGCCAAGGGATCACGGTCACCGTCTCCTCA  329
D  100.0% (6/6)     IGHD6-19*01  17   ..---------------------------------------------------------  18
J  94.6% (53/56)    IGHJ6*02     7    ---.............TA.....................C...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_182584

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           308     4e-86
IGHD4-4*01                                                                                            19.9    0.17 
IGHJ3*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-4*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	N/A	CTACAGTACCTAC	GCGCGAAGCTCCGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACTACAGTACCTACGCGCGAAGCTCCGGTTTTGATATC	ARDYSTYARSSGFDI	276	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	275	147	110	4	33	74.8
CDR3-IMGT (germline)	276	283	8	7	1	0	87.5
Total	N/A	N/A	283	242	8	33	85.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_204    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  85.5% (242/283)  IGHV3-21*01  47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  S  S  H  I  Y  Y  A  D  S  V  K  G  R  F  T  Y  Y  A  D  S  V  
                    Query_204    91   AGTGGGTCTCATCCATTAGTGGTAGTAGTAGTCACATATATTACGCAGACTCAGTGAAGGGCCGATTCACCTATTACGCAGACTCAGTGA  180
V  85.5% (242/283)  IGHV3-21*01  137  ....................A...........T.......C...---------------------------------.............  193
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y                                   A  D  S  V  

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                      K  G  R  F  T  I  S  R  D  D  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  
                    Query_204    181  AGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATT  270
V  85.5% (242/283)  IGHV3-21*01  194  ..........................A..........................................................G....  283
                                      K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-----------------CDR3-IMGT----------------->                                  
                                      F  C  A  R  D  Y  S  T  Y  A  R  S  S  G  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_204    271  TCTGTGCGAGGGACTACAGTACCTACGCGCGAAGCTCCGGTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  354
V  85.5% (242/283)  IGHV3-21*01  284  A.........A..-----------------------------------------------------------------------  296
                                      Y  C  A  R                                                                          
D  92.3% (12/13)    IGHD4-4*01   4    -------------........A....----------------------------------------------------------  16
J  100.0% (44/44)   IGHJ3*02     7    ----------------------------------------............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_182583

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     4e-93
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_205    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  S  L  K  P  R  V  T  I  S  L  D  T  S  K  N 
                    Query_205    91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCTCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-59*08  139  ...A....G......T.......T..............................AG............A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G 
                    Query_205    181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGT  270
V  93.4% (228/244)  IGHV4-59*08  229  .............A......C..........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_205    271  TATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  334
J  94.2% (49/52)    IGHJ1*01     1    ------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_320330

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         371     7e-105
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTGG	CTATGGTTCGGGGAGTTATTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATCGTGGCTATGGTTCGGGGAGTTATTATTTTGACAAC	ARDRGYGSGSYYFDN	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_206      1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  97.2% (244/251)  IGHV4-30-4*01  49   ..................A.......................................................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_206      91   CTGGAGTGGATTGGGTACATCCATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  97.2% (244/251)  IGHV4-30-4*01  139  .....................T............G.................................T.....................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  A  Y  H  C  A  R  D  R  G  Y  G  S  G 
                    Query_206      181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGCCTATCACTGTGCCAGAGATCGTGGCTATGGTTCGGGG  270
V  97.2% (244/251)  IGHV4-30-4*01  229  ....................................................TG...T.............-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01    7    -----------------------------------------------------------------------------.............  19

                                        ----------------->                                  
                                         S  Y  Y  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_206      271  AGTTATTATTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  322
D  100.0% (22/22)   IGHD3-10*01    20   .........-------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02       6    ---------......T...............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_182581

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  Y  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_207    1    ACCCTGTCCCTCACCTACACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   ................G..............G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_207    91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.2% (226/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_207    181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.2% (226/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  P  V  S  S  
                    Query_207    271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCCCCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  95.9% (47/49)    IGHJ5*02     3    ------...........................A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_182580

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           352     3e-99
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCATAGGGGTG	ATTACGATTTTTGGAGGGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCATAGGGGTGATTACGATTTTTGGAGGGGTTATTGACTACTTCGACTAC	ARSIGVITIFGGVIDYFDY	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	234	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_208    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (234/243)  IGHV4-59*08  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  S  T  K  Y  N  P  S  L  Q  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_208    91   TGGATTGGTTATGTGTATTACAGTGGGAGCACCAAGTATAACCCCTCGCTCCAGAGTCGAGTCACCATATCACTAGACACCTCCAAGAAC  180
V  96.3% (234/243)  IGHV4-59*08  139  ........G...A.C....................C..C........C...A....................G.......G.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  I  G  V  I  T  I  F  G 
                    Query_208    181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGATCCATAGGGGTGATTACGATTTTTGGA  270
V  96.3% (234/243)  IGHV4-59*08  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.8% (23/24)    IGHD3-3*01   3    ---------------------------------------------------------------------------...............  17

                                      ----------------------->                                  
                                       G  V  I  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_208    271  GGGGTTATTGACTACTTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.8% (23/24)    IGHD3-3*01   18   .T.......-------------------------------------------------  26
J  97.9% (47/48)    IGHJ4*02     1    ----------.......T........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_320331

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTCC	ATAGTGCTTACGAGTAC	GGGAAAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCTCCATAGTGCTTACGAGTACGGGAAATTGGTTCGACCCC	ASSIVLTSTGNWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	233	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  S  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_209    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTCAGTAGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (233/242)  IGHV4-59*01  49   ....................................A..................G.........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_209    91   TGGATTGGGTATATCTATTACAGTGGAACCACCAACTACAATCCCTCCCTCGAGAGTCGAGTCACCATATCTTTAGACACGTCCAAGAAC  180
V  96.3% (233/242)  IGHV4-59*01  139  ..........................G.G............C.........A...................AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  S  I  V  L  T  S  T  G  N 
                    Query_209    181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGCTCCATAGTGCTTACGAGTACGGGAAAT  270
V  96.3% (233/242)  IGHV4-59*01  229  ..............................................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  82.4% (14/17)    IGHD5-12*01  7    ------------------------------------------------------------------......GC.....T...-------  23

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_209    271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (46/46)   IGHJ5*02     6    ..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_182589

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           452     3e-129
IGHD3-3*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              110     2e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGAG	TTTTTGGAGTGGT	CCAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGTTTTTGGAGTGGTCCAGTACTACTACTACGGTATGGACGTC	ARDRVFGVVQYYYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	290	1	0	99.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_210    1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  99.7% (290/291)  IGHV1-69*01  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q
                    Query_210    91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACA  180
V  99.7% (290/291)  IGHV1-69*01  96   ..........................................................................................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_210    181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  99.7% (290/291)  IGHV1-69*01  186  ..........................................................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  D  R  V  F  G  V  V  Q  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T
                    Query_210    271  CGTGTATTACTGTGCGAGAGATCGAGTTTTTGGAGTGGTCCAGTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCAC  360
V  99.7% (290/291)  IGHV1-69*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (13/13)   IGHD3-3*01   10   --------------------------.............---------------------------------------------------  22
J  100.0% (57/57)   IGHJ6*02     6    -------------------------------------------...............................................  52

                                                
                                        V  S  S 
                    Query_210    361  CGTCTCCTCA  370
J  100.0% (57/57)   IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_247822

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           330     1e-92
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGCCGG	TGGTTCGGGGAGTTATTA	CAGAGGA	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGCCGGTGGTTCGGGGAGTTATTACAGAGGATTCGACCCC	ARDAGGSGSYYRGFDP	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	231	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_211    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGTTCCATCAGCAGCGGTTCTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  92.0% (231/251)  IGHV4-31*03  49   ................................C...........T...GG............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  P  S  Y  Y  N  P  S  L  R  S  R  L  A  I  S  V  D  T  S 
                    Query_211    91   CTGGAGTGGATTGGGTACATCCATCACAGTGGGCCCAGCTACTACAACCCGTCCCTCAGGAGTCGACTTGCGATATCAGTAGACACGTCT  180
V  92.0% (231/251)  IGHV4-31*03  139  .....................T..T........AG..C....................A.......G..A.C..................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  E  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  A  G  G  S  G  S 
                    Query_211    181  AAGAATGAACTCTCCCTGAAGCTGACCTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGAGACGCCGGTGGTTCGGGGAGT  270
V  92.0% (231/251)  IGHV4-31*03  229  .....CC.GT...............G..............................T..............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (18/18)   IGHD3-10*01  10   -----------------------------------------------------------------------------.............  22

                                      GT------------------>                                  
                                       Y  Y  R  G  F  D  P  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_211    271  TATTACAGAGGATTCGACCCCTGGGGTCAGGGAGTCCTGGTCACCGTCTCCTCAG  325
D  100.0% (18/18)   IGHD3-10*01  23   .....--------------------------------------------------  27
J  93.0% (40/43)    IGHJ5*02     9    ------------..............C......AC....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_330743

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           327     9e-92
IGHD2-2*01                                                                                            23.8    0.011
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TATT	TAGTACCAGCTG	GAACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTATTTAGTACCAGCTGGAACGACTACGGTTTGGACGTC	ARVFSTSWNDYGLDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  T  D  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_212    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCCTTCACTGATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-48*03  47   ...................................A......G.AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  R  G  G  H  S  T  H  Y  A  T  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_212    91   AGTGGGTTTCATACATTAGTCGCGGTGGTCATTCCACACACTACGCGACCTCTGTTAAGGGCCGATTCACCATCTCCAGAGACAGCGCCA  180
V  92.0% (229/249)  IGHV3-48*03  137  ....................A.TA.....AG.A...T.T.......AGA......G............................A.....  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  R  V  F  S  T  S  W  N  
                    Query_212    181  AGAACTCACTCTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTCTTTATTACTGTGCGAGAGTATTTAGTACCAGCTGGAACG  270
V  92.0% (229/249)  IGHV3-48*03  227  ..........G.........................C.............G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD2-2*01   13   -------------------------------------------------------------------------............-----  24

                                      ---------------->                                 
                                      D  Y  G  L  D  V  W  G  L  G  T  T  V  T  V  S  S 
                    Query_212    271  ACTACGGTTTGGACGTCTGGGGCCTAGGAACCACGGTCACCGTCTCCTCA  320
J  94.0% (47/50)    IGHJ6*02     13   ........A...............A...G.....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_330740

Length=432
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           363     2e-102
IGHD3-16*01                                                                                           18.0    0.74  
IGHJ6*02                                                                                              73.7    3e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCCACCCTCAGGCCCGAGGAGG	ATGATCGCGTTTGGG	CCCCCTGGGACGCCCATACCCCCCCTCCGATTACCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCACCCTCAGGCCCGAGGAGGATGATCGCGTTTGGGCCCCCTGGGACGCCCATACCCCCCCTCCGATTACCCACTACTCGGCTATGGAGGTC	STLRPEEDDRVWAPWDAHTPPPITHYSAMEV	284	376	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	103	11	0	90.4
Total	N/A	N/A	282	257	25	0	91.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  G  V  K  R  P  G  A  S  V  R  V  S  C  K  A  S  A  Y  T  F  T  T  Y 
                    Query_213    2    CAGCTGGTGCAGTCTGGAGGTGGGGTGAAGAGGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGCTTACACTTTTACCACCTAC  91
V  91.1% (257/282)  IGHV1-18*04  7    ...................C..A........A.................A....................G......C.......G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       V  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  V  K  N  G  N  T  N  Y  A  P 
                    Query_213    92   GTGATCAGCTGGGTGCGACAGGCCCCAGGACAAGGACTTGAGTGGATGGGATGGATCAGCGTTAAGAATGGTAACACAAACTATGCACCG  181
V  91.1% (257/282)  IGHV1-18*04  97   .GT.......................T........G.........................C.T.C......................A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       E  F  Q  G  R  L  T  M  T  T  D  A  F  T  T  T  A  Y  L  D  L  T  S  L  R  S  D  D  T  A 
                    Query_213    182  GAGTTCCAGGGCAGACTCACCATGACCACAGACGCATTCACGACCACAGCCTATCTGGACCTGACGAGCCTGAGATCTGACGACACGGCC  271
V  91.1% (257/282)  IGHV1-18*04  187  A..C...........G.................A...C.....G.........CA....G....G.........................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------------------------CDR3-IMGT---------------------------
                                       V  Y  Y  C  S  T  L  R  P  E  E  D  D  R  V  W  A  P  W  D  A  H  T  P  P  P  I  T  H  Y 
                    Query_213    272  GTGTATTACTGTTCCACCCTCAGGCCCGAGGAGGATGATCGCGTTTGGGCCCCCTGGGACGCCCATACCCCCCCTCCGATTACCCACTAC  361
V  91.1% (257/282)  IGHV1-18*04  277  ............------------------------------------------------------------------------------  288
                                       V  Y  Y  C                                                                               
D  86.7% (13/15)    IGHD3-16*01  6    ----------------------------------.....TA........-----------------------------------------  20
J  90.6% (48/53)    IGHJ6*02     10   -------------------------------------------------------------------------------------.....  14

                                      -------------->                                 
                                       S  A  M  E  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_213    362  TCGGCTATGGAGGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  409
J  90.6% (48/53)    IGHJ6*02     15   .AC.G......C.........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 42497568


Query= Query_247826

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           299     2e-83
IGHD1-26*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCCTAA	TGGGAGC	GACCGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCCTAATGGGAGCGACCGTTTTTGACTAC	AKVLMGATVFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	220	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  T  S  G  F  T  F  S  D  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_214    1    GGTCCCTGAGACTCTCCTGTGAAACCTCAGGATTCACCTTCAGCGACTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  88.4% (220/249)  IGHV3-23*01  47   .....................C.G....T...........T...AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  N  R  G  R  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  K  S  
                    Query_214    91   AGTGGGTCTCAGGTATTAGTAATCGTGGTCGAAACACCTACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAAGTCCA  180
V  88.4% (220/249)  IGHV3-23*01  137  ............C.......GG.A.....G.T.G...A...............................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  R  T  V  Y  L  Q  M  N  N  L  R  G  D  D  T  A  I  Y  F  C  A  K  V  L  M  G  A  T  V  
                    Query_214    181  AGAGGACGGTATATTTGCAGATGAACAACTTGAGAGGCGACGACACGGCCATTTATTTCTGTGCGAAAGTCCTAATGGGAGCGACCGTTT  270
V  88.4% (220/249)  IGHV3-23*01  227  ...AC...C.G...C....A.......G.C......C...G.........G.A....A...........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD1-26*01  8    ---------------------------------------------------------------------------.......--------  14
J  93.0% (40/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  V  L  V  T  V  S  A  
                    Query_214    271  TTGACTACTGGGGCCAGGGAGTCCTGGTCACCGTCTCCGCAG  312
J  93.0% (40/43)    IGHJ4*02     7    ....................AC................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_247827

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           391     6e-111
IGHD3-3*01                                                                                            18.0    0.68  
IGHJ5*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATCACGGCCCGCTAGTGGTACG	GGTTATTAT	GGACCG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATCACGGCCCGCTAGTGGTACGGGTTATTATGGACCGAACTGCTTCGACCCC	ARGSRPASGTGYYGPNCFDP	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	16	8	0	66.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  A  S  G  D  S  F  S  G  Y
                    Query_215    1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGGCTTCAGGGGACTCCTTCAGTGGGTA  90
V  93.1% (270/290)  IGHV1-69*01  6    ..................G...........................................A......T..A.G.A.......CA.C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  I  P  I  L  G  S  A  N  H  A  Q
                    Query_215    91   TGGAATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGTGATCATCCCTATCCTTGGTTCAGCAAACCACGCACA  180
V  93.1% (270/290)  IGHV1-69*01  96   ..CT....G............................................G.............T.....A........T.......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  K  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_215    181  GAAGTTCAAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGTTGAGCAGCCTGAGATCTGAAGACACGGC  270
V  93.1% (270/290)  IGHV1-69*01  186  .......C.....................................................C...................G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  Y  C  A  R  G  S  R  P  A  S  G  T  G  Y  Y  G  P  N  C  F  D  P  W  G  Q  G  T  L
                    Query_215    271  CATGTATTACTGTGCGAGAGGATCACGGCCCGCTAGTGGTACGGGTTATTATGGACCGAACTGCTTCGACCCCTGGGGCCAGGGAACCCT  360
V  93.1% (270/290)  IGHV1-69*01  276  .G..................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (9/9)     IGHD3-3*01   20   -------------------------------------------.........--------------------------------------  28
J  98.0% (48/49)    IGHJ5*02     3    ----------------------------------------------------------.....G..........................  34

                                                       
                                        V  T  V  S  S  
                    Query_215    361  GGTCACCGTCTCCTCAG  377
J  98.0% (48/49)    IGHJ5*02     35   .................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_330744

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_216    1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_216    91   GAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ...................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_216    181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_216    271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_330748

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     2e-95
IGHD3-10*01                                                                                           10.3    118  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_217    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-21*01  47   ............................................AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  E  Y  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_217    91   AGTGGGTCTCATCCATTAGTAGTACTAGTGAATACATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  93.6% (233/249)  IGHV3-21*01  137  ........................G....AGT........C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_217    181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTT  270
V  93.6% (233/249)  IGHV3-21*01  227  ............A......A..............................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_217    271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_247829

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD3-16*01                                                                                           21.8    0.039
IGHJ2*01                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCT	GGGAGTTATGC	CGAT	TTCAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTGGGAGTTATGCCGATTTCAATATC	AAGSYADFNI	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  R  S  Y  D  M  I  W  V  R  Q  A  P  G  K  G  L  
                    Query_218    1    GGTCCCTGAGACTCTCCTGTGCAGTTTCCGGATTCACCTTTAGAAGCTATGACATGATTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (228/245)  IGHV3-23*01  47   ........................CC..T..............C.......C.....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  A  S  A  I  S  G  N  G  G  S  S  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_218    91   AGTGGGCCTCAGCTATTAGTGGAAATGGTGGTAGTTCATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (228/245)  IGHV3-23*01  137  ......T...............T.G.........CA......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  I  L  Y  L  Q  M  N  S  R  R  V  E  D  T  A  V  Y  Y  C  A  A  G  S  Y  A  D  F  N  
                    Query_218    181  AGAACATTCTGTATTTGCAAATGAACAGCCGGAGAGTCGAGGACACGGCCGTATATTACTGTGCGGCTGGGAGTTATGCCGATTTCAATA  270
V  93.1% (228/245)  IGHV3-23*01  227  ......CG......C...............T.....C............................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD3-16*01  20   --------------------------------------------------------------------...........-----------  30
J  88.4% (38/43)    IGHJ2*01     11   -----------------------------------------------------------------------------------...G..C  17

                                      ->                                  
                                      I  W  G  R  G  T  L  V  T  V  S  S  
                    Query_218    271  TCTGGGGCCGGGGCACGTTGGTCACTGTCTCCTCAG  306
J  88.4% (38/43)    IGHJ2*01     18   ..........T.....CC..................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_32564

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           329     3e-92
IGHD3-22*01                                                                                           46.8    1e-09
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	C	TATTACTATGAAAGTAGTGCTTATTACTAC	GGCAGG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGACTATTACTATGAAAGTAGTGCTTATTACTACGGCAGG	AKDYYYESSAYYYGR	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  G  G  F  R  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_219    1    GGTCCCTGAGACTCTCCTGTGCAGGCGGTGGATTCAGGTTCAGTTCCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-30*18  47   ........................C.TC........CC......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  A  A  V  I  S  S  D  G  S  I  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_219    91   AGTGGGCGGCAGTAATATCATCTGATGGAAGCATTAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATCCCC  180
V  92.0% (230/250)  IGHV3-30*18  137  ......T......T.......A.........T.A....................................................T..A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      Q  F  T  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  Y  Y  Y  E  S  S  
                    Query_219    181  AGTTCACGTTGCATTTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCCAAAGACTATTACTATGAAAGTAGTG  270
V  92.0% (230/250)  IGHV3-30*18  227  ..AA....C..T..C.................................................G.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (28/30)    IGHD3-22*01  2    -----------------------------------------------------------------------...........T.......  20

                                      ---------------->                                  
                                      A  Y  Y  Y  G  R  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_219    271  CTTATTACTACGGCAGGTGGGGCCAGGGAACCCAAGTCACCGTCTCCTCAG  321
D  93.3% (28/30)    IGHD3-22*01  21   G..........----------------------------------------  31
J  94.1% (32/34)    IGHJ4*02     15   -----------------................TG................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_271895

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           286     1e-79
IGHD6-6*01                                                                                            14.1    8.4  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTAAA	AGACTGGG	GTATACCAATTCGTCC	GGGCCGA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTAAAAGACTGGGGTATACCAATTCGTCCGGGCCGAACTTTGAGTAC	VKRLGYTNSSGPNFEY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	19	5	0	79.2
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	123	24	23	1	0	95.8
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	243	6	4	2	0	66.7
Total	N/A	N/A	231	207	24	0	89.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  S  F  S  T  F  G  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  V  A  V  I 
                    Query_220    13   TGTGCAGCCTCTGGATTCAGCTTCTCTACCTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCCAGGGGCTGGAGTGGGTGGCAGTTATA  102
V  89.6% (207/231)  IGHV3-30*18  64   ...................C....AG..G..A...............................A..........................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  H  D  G  S  N  K  F  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  V  F  L 
                    Query_220    103  TCACATGATGGAAGTAATAAATTCTATGGGGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCAAGAACACGGTCTTTCTG  192
V  89.6% (207/231)  IGHV3-30*18  154  ...T..................A.....CA.................A.....................T...........C.G.A....  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       H  M  K  S  L  R  S  D  D  T  A  V  Y  Y  C  V  K  R  L  G  Y  T  N  S  S  G  P  N  F  E 
                    Query_220    193  CATATGAAGAGCCTGAGAAGCGATGACACGGCTGTATATTACTGTGTTAAAAGACTGGGGTATACCAATTCGTCCGGGCCGAACTTTGAG  282
V  89.6% (207/231)  IGHV3-30*18  244  ..A.....C.........GCT..G...........G..........CG...---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  81.2% (13/16)    IGHD6-6*01   3    -----------------------------------------------------------.....G..GC......---------------  18
J  97.8% (44/45)    IGHJ4*02     4    ----------------------------------------------------------------------------------.......C  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_220    283  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  97.8% (44/45)    IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_320815

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           308     4e-86
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTGG	AGCAGTGGCTGGT	CGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTGGAGCAGTGGCTGGTCGGTTTGACTTC	AREGGAVAGRFDF	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	224	27	0	89.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  R  G  S  V  S  S  G  G  Y  H  W  S  W  I  R  Q  T  P  G  R  G 
                    Query_221    1    ACCCTGTCCCTCACCTGCTCTGTCTCTCGTGGCTCCGTCAGCAGTGGGGGTTATCACTGGTCCTGGATCCGGCAGACCCCAGGCAGGGGA  90
V  89.2% (224/251)  IGHV4-61*08  49   ..................A........G...................T.....CT.....AG.............C.......G.A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  F  T  G  T  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  A  D  M  S 
                    Query_221    91   CTGGAGTGGATTGGCTATATCCACTTCACTGGGACCACCAAGTACAACCCCTCCCTTAAGAGTCGAGTCAGCATATCAGCAGACATGTCC  180
V  89.2% (224/251)  IGHV4-61*08  139  ..............G......T.T.A..G.....G......C..............C.............C........T.....C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  A  V  A  G 
                    Query_221    181  AAGAACCAATTCTCCCTGAACCTGAGGTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTGCGAGAGAGGGTGGAGCAGTGGCTGGT  270
V  89.2% (224/251)  IGHV4-61*08  229  ........G...........G.....C..........................G..T..C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD6-19*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------->                                  
                                       R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_221    271  CGGTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02     6    ---.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_216271

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           296     2e-82
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GACTAGTGA	GATAGTAGTG	CTTGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGACTAGTGAGATAGTAGTGCTTGGTGCTTTCGATATG	ARETSEIVVLGAFDM	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	217	28	0	88.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  R  S  H  S  W  S  W  I  R  Q  P  P  G  K  G  M  E 
                    Query_222    1    ACCCTGTCCCTCACCTGCAATGTCTCTGGAGACTCCATCAGAAGTCATTCGTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGAATGGAG  90
V  88.6% (217/245)  IGHV4-59*01  49   ...................C.........T.G.........T...T.C.AC.......................A.........C.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  V  E  Y  R  G  G  S  N  Y  N  P  S  L  N  S  R  L  T  I  S  V  D  M  S  K  N 
                    Query_222    91   TGGATTGGAAATGTCGAATACAGGGGAGGCTCCAACTACAACCCCTCCCTCAACAGTCGACTCACCATATCAGTGGACATGTCCAAGAAT  180
V  88.6% (217/245)  IGHV4-59*01  139  ........GT..A..T.T.....T..GA..A......................G......G.............A....C.........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  T  S  E  I  V  V  L  G 
                    Query_222    181  CAGTTCTCCCTGAAGCTGAGCAGTGTGACCGCGGCGGACACGGCCGTCTATTACTGTGCGAGAGAGACTAGTGAGATAGTAGTGCTTGGT  270
V  88.6% (217/245)  IGHV4-59*01  229  .....................TC.........T..............G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  11   --------------------------------------------------------------------------..........------  20
J  95.6% (43/45)    IGHJ3*02     4    -----------------------------------------------------------------------------------------.  4

                                      ----------->                                
                                       A  F  D  M  W  G  Q  G  T  M  V  T  V  S  S
                    Query_222    271  GCTTTCGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  314
J  95.6% (43/45)    IGHJ3*02     5    .....T.....C................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_216270

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           417     6e-119
IGHD6-13*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGG	GCAACAGCTGG	CCAGATATGCTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGGCAACAGCTGGCCAGATATGCTTATGACTAT	AREGQQLARYAYDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  N
                    Query_223    1    GCAGCTGGTGCAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTTTCCTGTGCAGCGTCTGGATTCACCTTCAGTAACAA  90
V  95.9% (279/291)  IGHV3-33*01  6    ..........G...........................................C...............................G.T.  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  Q  I  W  Y  D  G  S  N  K  Y  Y  A  D
                    Query_223    91   TGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCACAAATATGGTATGATGGAAGTAATAAATACTATGCAGA  180
V  95.9% (279/291)  IGHV3-33*01  96   ..G.................................................GTT...................................  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  R  G  R  F  T  I  S  R  D  Y  S  K  N  T  V  Y  L  Q  M  N  S  L  R  V  E  D  T  A
                    Query_223    181  CTCCGTGAGGGGCCGATTCACCATCTCCAGAGACTATTCCAAGAACACGGTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGC  270
V  95.9% (279/291)  IGHV3-33*01  186  ........A.........................A..............C...........................C............  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  E  G  Q  Q  L  A  R  Y  A  Y  D  Y  W  G  Q  R  T  L  V  T  V  S  S  
                    Query_223    271  TGTGTATTACTGTGCGAGAGAAGGGCAACAGCTGGCCAGATATGCTTATGACTATTGGGGCCAGAGAACCCTGGTCACCGTCTCCTCAG  359
V  95.9% (279/291)  IGHV3-33*01  276  .....................--------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                       
D  90.9% (10/11)    IGHD6-13*01  8    ------------------------...G.......------------------------------------------------------  18
J  95.1% (39/41)    IGHJ4*02     8    ------------------------------------------------......C.........G........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_216273

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTTGTGG	TACTCTGGTTCGGGGAGT	AAAACCCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTTGTGGTACTCTGGTTCGGGGAGTAAAACCCATTTTGACTAC	ARGLWYSGSGSKTHFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_224    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .............................................................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_224    91   CTGGAGTGGATTGGGTACATTTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATTTCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ....................C.....................................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  W  Y  S  G  S 
                    Query_224    181  AAGAACCAGTTCTCCCTGAAGCTGCGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGTTTGTGGTACTCTGGTTCG  270
V  98.4% (246/250)  IGHV4-31*03  229  ........................A.............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  5    ------------------------------------------------------------------------------....A.......  16

                                      MGT-------------------->                                  
                                       G  S  K  T  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_224    271  GGGAGTAAAACCCATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  94.4% (17/18)    IGHD3-10*01  17   ......----------------------------------------------------  22
J  100.0% (43/43)   IGHJ4*02     6    ---------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_216272

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           10.3    117  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAGGTTTCGATA	GGGGG	G	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAGGTTTCGATAGGGGGGGGTTCGACCCC	ARDRGFDRGGFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_225    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A......A..............................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  Y  Y  S  G  S  I  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  M  P  K  N 
                    Query_225    91   TGGATTGCGTATATCTATTACAGTGGGAGCATCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACATGCCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  .......G.......................C...C.....................................T.....C.T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  I  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  G  F  D  R  G  G  F 
                    Query_225    181  CAGATCTCCCTGAAGTTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATAGAGGTTTCGATAGGGGGGGGTTC  270
V  95.1% (233/245)  IGHV4-59*01  229  ...T...........C................T................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -------------------------------------------------------------------------------.....------  22
J  100.0% (45/45)   IGHJ5*02     7    -------------------------------------------------------------------------------------.....  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_225    271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (45/45)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_216275

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           313     1e-87
IGHD2-21*02                                                                                           29.5    2e-04
IGHJ1*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-21*02	IGHJ1*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGAAGCGA	TGTGGTGGTGACTGC	CGAG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATCGAAGCGATGTGGTGGTGACTGCCGAGTACTTCCAACAC	*KIEAMWW*LPSTSNT	242	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	127	24	19	4	1	79.2
FR3-IMGT	128	241	114	103	11	0	90.4
CDR3-IMGT (germline)	242	249	8	7	1	0	87.5
Total	N/A	N/A	250	227	22	1	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  F  S  S  S  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_226    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCTTCAGTAGTTCTGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  90.8% (227/250)  IGHV3-30*18  47   ...................................A..........C.A...C................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  S  D  G   V  I  S  G  F  R  N  P  *  R  A  D  S  P  S  P  E  T  I  R 
                    Query_226    91   AGTGGGTGGCAGTCATCTCTTCTGATGGA-GTAATAAGTGGTTTTCGGAATCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCGA  179
V  90.8% (227/250)  IGHV3-30*18  137  .............T..A..A.A.......A.......A.AC.A.G.A..C......................................C.  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                       R  T  L  C  L  C  K  *  A  A  *  E  L  R  T  R  L  F  I  T  V  *  K  I  E  A  M  W  W  * 
                    Query_226    180  AGAACACTCTGTCTCTGCAAATGAGCAGCCTGAGAGCTGAGGACACGGCTGTTTATTACTGTGTGAAAGATCGAAGCGATGTGGTGGTGA  269
V  90.8% (227/250)  IGHV3-30*18  227  .......G....A...........A...........................G..........C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD2-21*02  8    -------------------------------------------------------------------------------...........  18

                                      T------------------>                                  
                                       L  P  S  T  S  N  T  G  A  R  A  P  W  *  P  S  P  Q 
                    Query_226    270  CTGCCGAGTACTTCCAACACTGGGGCCAGGGCACCCTGGTGACCGTCTCCTCAG  323
D  100.0% (15/15)   IGHD2-21*02  19   ....--------------------------------------------------  22
J  95.7% (44/46)    IGHJ1*01     7    --------........G.......................C.............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_216274

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD2-2*01                                                                                            10.3    136   
IGHJ3*01                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTGAAGTCTTT	TACCA	CCGAG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATGTC	ASLKSFTTEDAFDV	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	18	6	0	75
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	292	272	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  V  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  
                    Query_227    2    AGATGCAGCTGGTGCAGTCTGGAGCAGTGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATTCGACTTTACCA  91
V  93.2% (272/292)  IGHV5-51*01  2    ..G........................A..................................................A.AG........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  S  W  I  G  W  V  R  Q  M  P  G  K  G  L  Q  W  M  G  V  I  Y  P  D  D  S  D  T  R  Y  
                    Query_227    92   CCTCTTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGCAATGGATGGGAGTCATCTATCCTGATGACTCTGATACCAGATATA  181
V  93.2% (272/292)  IGHV5-51*01  92   G..AC.......................................G.G........GA............G..................C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  R  G  Q  V  T  I  S  A  A  K  S  I  N  T  A  Y  L  Q  W  G  S  L  K  A  S  D  
                    Query_227    182  GTCCGTCCTTCCGAGGCCAGGTCACCATCTCAGCCGCCAAGTCCATCAACACTGCCTACCTGCAGTGGGGCAGCCTGAAGGCCTCGGACA  271
V  93.2% (272/292)  IGHV5-51*01  182  .C..........A.......................A...........G...C...............A.....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  A  S  L  K  S  F  T  T  E  D  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  
                    Query_227    272  CCGCCATGTATTACTGTGCGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTT  361
V  93.2% (272/292)  IGHV5-51*01  272  ......................--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (5/5)     IGHD2-2*01   16   ----------------------------------.....---------------------------------------------------  20
J  100.0% (49/49)   IGHJ3*01     2    --------------------------------------------..............................................  47

                                         
                                      S  
                    Query_227    362  CAG  364
J  100.0% (49/49)   IGHJ3*01     48   ...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_216277

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            310     1e-86
IGHD3-10*01                                                                                           10.3    117  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CTC	TTCGG	AGGGTTGGGTTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTCTTCGGAGGGTTGGGTTATTGACTCC	ARDSSEGWVIDS	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  F  S  F  S  S  Y  W  M  S  W  V  R  Q  S  P  G  K  G  L  
                    Query_228    1    GGTCCCTGAGACTCTCCTGTGAAGGCTCTGGATTTAGTTTTAGTAGTTATTGGATGAGCTGGGTCCGCCAGTCTCCAGGAAAGGGGCTGG  90
V  89.6% (224/250)  IGHV3-7*03   47   .....................C..C.........C.CC........C........................G.......G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  L  D  G  S  R  Q  F  Y  V  D  S  V  K  G  R  F  S  I  S  R  D  N  E  
                    Query_228    91   AGTGGGTGGCCAACATAAACCTGGATGGAAGTAGGCAATTCTACGTGGACTCTGTGAAGGGCCGATTCAGCATCTCCAGAGACAACGAGA  180
V  89.6% (224/250)  IGHV3-7*03   137  ...................G.AA.........GA.A...A...T.........................C.................CC.  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  V  Y  L  Q  M  K  N  L  R  V  E  D  T  A  V  Y  F  C  A  R  D  S  S  E  G  W  V  
                    Query_228    181  AGAACTCAGTGTATCTACAAATGAAGAACCTGAGAGTCGAGGACACGGCCGTTTATTTCTGTGCGAGAGACTCTTCGGAGGGTTGGGTTA  270
V  89.6% (224/250)  IGHV3-7*03   227  ........C.......G........C.G........C...............G....A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  13   -------------------------------------------------------------------------.....------------  17

                                      ------->                                
                                      I  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_228    271  TTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  310
J  95.0% (38/40)    IGHJ4*02     7    ......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_216276

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           310     1e-86
IGHD3-9*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GCCATATTATAAAGATGATG	CTGGTTATTAT	TATGTC	GACAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGCCATATTATAAAGATGATGCTGGTTATTATTATGTCGACAAC	AKEPYYKDDAGYYYVDN	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  K  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_229    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAAGACTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  89.6% (224/250)  IGHV3-30*18  47   ........................................C.GT.GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  D  G  I  V  E  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_229    91   AGTGGGTGGCGCTTATATCATATGATGGAATTGTTGAACATTATGCAGACTCCGTGAAGGGCCGATTCACCGTTTCCAGAGACAATTCGA  180
V  89.6% (224/250)  IGHV3-30*18  137  ..........AG..................G.AA.A..T.C..............................A.C..............C.  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  L  N  S  L  R  P  D  D  T  G  L  Y  F  C  A  K  E  P  Y  Y  K  D  D  
                    Query_229    181  GGAACACGCTTTATCTTCAACTGAACAGCCTGAGACCTGACGACACGGGTCTATATTTCTGTGCGAAAGAGCCATATTATAAAGATGATG  270
V  89.6% (224/250)  IGHV3-30*18  227  A.........G.....G...A..............G....G.......C.G.G....A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      GT-------------------->                                  
                                      A  G  Y  Y  Y  V  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_229    271  CTGGTTATTATTATGTCGACAACTGGGGCCAGGGAACCCTGGTCACCGTGTCCTCAG  327
D  100.0% (11/11)   IGHD3-9*01   18   ...........----------------------------------------------  28
J  95.0% (38/40)    IGHJ4*02     9    -----------------...T............................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_216279

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_230    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  98.3% (284/289)  IGHV5-51*03  6    ..............................................................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_230    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ...................................................G............................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_230    181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_230    271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  98.3% (284/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_216278

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           445     2e-127
IGHD6-6*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	GTATAGCAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTATAGCAGCTCGTCCTTGGTCTGACTAC	ARGIAARPWSDY	292	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	114	0	0	100
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	289	4	0	98.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_231    5    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  94
V  98.6% (289/293)  IGHV5-51*03  2    ....G........G............................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  F  W  L  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_231    95   GCTTCTGGCTCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  184
V  98.6% (289/293)  IGHV5-51*03  92   ...A....A.................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_231    185  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  98.6% (289/293)  IGHV5-51*03  182  ..........................................................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  M  Y  Y  C  A  R  G  I  A  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_231    275  CCGCCATGTATTACTGTGCGAGAGGTATAGCAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  361
V  98.6% (289/293)  IGHV5-51*03  272  .......................----------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                 
D  100.0% (16/16)   IGHD6-6*01   3    ------------------------................-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_70521

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            276     3e-76
IGHD3-10*01                                                                                           10.3    119  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCACC	CGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACCCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	96	18	0	84.2
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	211	35	0	85.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_232    1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  85.8% (211/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  S  M  S  V  D  K  S  K 
                    Query_232    91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCAGCATGTCAGTAGACAAGTCCAAG  180
V  85.8% (211/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A............C...A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  N  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_232    181  AATCAATTCTCCCTCACGCTGACGTCTCTGAACGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACCCGG  270
V  85.8% (211/246)  IGHV4-4*01   229  ..C..G........G.A.....GC...G...C..................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (5/5)     IGHD3-10*01  15   ---------------------------------------------------------------------------------------...  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_232    271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (5/5)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_70526

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           288     5e-80
IGHD3-22*01                                                                                           16.1    2.6  
IGHJ5*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGCGGCCCGGAACCGAC	AGTAGTGG	CCTCCC	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCGGCCCGGAACCGACAGTAGTGGCCTCCCCAATTGGTTCGACCCC	ARGRPGTDSSGLPNWFDP	287	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	58	12	0	82.9
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	172	27	19	5	3	70.4
FR3-IMGT	173	286	114	94	20	0	82.5
CDR3-IMGT (germline)	287	292	6	6	0	0	100
Total	N/A	N/A	292	240	49	3	82.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  A  V  R  R  S  G  D  S  L  K  I  S  C  K  T  S  G  Y  K  F  S  T  Y
                    Query_233    1    GCAGCTGGTGCAGTCTGGAGCAGCGGTGAGGAGGTCCGGAGACTCTCTGAAGATCTCTTGTAAGACCTCGGGATACAAGTTCTCCACATA  90
V  82.2% (240/292)  IGHV5-51*01  6    .......................A.....AA.A.C....G..G..............C......GGT..T.......GC..TA...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><--------CDR2-IMGT--------><-------
                                        G  I  A  W  V  R  Q  M  P  G  R  G  L  E  W  A  G  I  I  Y  P  S  D  S  K  N  V  R  Y  N
                    Query_233    91   CGGGATCGCCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGGCGGGAATCATCTATCCTAGTGACTCAAAGAATGTCAGATATAA  180
V  82.2% (240/292)  IGHV5-51*01  96   .T......G.......................A.............AT...G............G.......---TG..AC......C.G  182
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S     D  T  R  Y  S

                                      ---------------------------------------------FR3-IMGT-------------------------------------
                                        P  S  F  R  G  H  V  T  I  S  V  E  K  A  I  T  T  A  Y  L  E  W  D  S  L  E  T  S  D  S
                    Query_233    181  TCCGTCCTTCAGAGGCCACGTCACCATTTCCGTCGAGAAGGCCATCACCACCGCCTACCTGGAGTGGGACAGCCTGGAGACCTCGGACAG  270
V  82.2% (240/292)  IGHV5-51*01  183  C.........CA......G........C..A.C...C...T......G.............C.....AG.......A..G.........C  272
                                        P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T

                                      ---------------><----------------------CDR3-IMGT--------------------->                    
                                        G  I  Y  Y  C  A  R  G  R  P  G  T  D  S  S  G  L  P  N  W  F  D  P  W  G  Q  G  T  L  V
                    Query_233    271  CGGCATCTATTACTGTGCGAGAGGGCGGCCCGGAACCGACAGTAGTGGCCTCCCCAATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  360
V  82.2% (240/292)  IGHV5-51*01  273  ..C...G...............--------------------------------------------------------------------  294
                                        A  M  Y  Y  C  A  R                                                                     
D  100.0% (8/8)     IGHD3-22*01  14   ----------------------------------------........------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    ------------------------------------------------------...C................................  37

                                                    
                                        T  V  S  A  
                    Query_233    361  CACCGTCTCCGCAG  374
J  96.0% (48/50)    IGHJ5*02     38   ..........T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_70527

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         360     1e-101
IGHD5-18*01                                                                                           14.1    8.6   
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GAAG	ACAGATATGG	GGGACTTTGGACCTGCAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAAGACAGATATGGGGGACTTTGGACCTGCATTACTTTGACTTC	ARGRQIWGTLDLHYFDF	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_234      1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  F  Y  N  T  E  T  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  D  R  S 
                    Query_234      91   CTGGAGTGGATTGGATACTTCTATAATACTGAGACCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCACTAGACAGGTCC  180
V  96.0% (240/250)  IGHV4-30-2*01  139  ..............G...A.....C...G..G..G.......................A...................G...........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  Q  I  W  G  T 
                    Query_234      181  AAGAACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAAGACAGATATGGGGGACT  270
V  96.0% (240/250)  IGHV4-30-2*01  229  ...................A......C...........................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD5-18*01    7    --------------------------------------------------------------------------....C.....------  16

                                        MGT-------------------->                                  
                                         L  D  L  H  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_234      271  TTGGACCTGCATTACTTTGACTTCTGGGGCCAGGGCACCCTCGTCACCGTCTCCTCAG  328
J  93.5% (43/46)    IGHJ4*02       3    ------------..........A............A.....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_70525

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           352     3e-99
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	AATCAC	GTATCACTATGATAATAATGGTTAT	AAG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATCACGTATCACTATGATAATAATGGTTATAAGTACTTTGACTAC	ARGITYHYDNNGYKYFDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	235	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_235    1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAA  90
V  95.9% (235/245)  IGHV4-34*01  49   ........................................................C...A............................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  I  N  H  G  G  D  S  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_235    91   TGGCTTGGGGAAATCAATCATGGTGGAGACTCTAAGTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.9% (235/245)  IGHV4-34*01  139  ...A.................A.....AG.A.C..C......................................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  I  T  Y  H  Y  D  N  N 
                    Query_235    181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGAATCACGTATCACTATGATAATAAT  270
V  95.9% (235/245)  IGHV4-34*01  229  .................................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  88.0% (22/25)    IGHD3-22*01  1    -----------------------------------------------------------------------....T.........G..G.  19

                                      -------------------->                                  
                                       G  Y  K  Y  F  D  Y  W  S  Q  G  T  L  V  T  V  S  S  
                    Query_235    271  GGTTATAAGTACTTTGACTACTGGAGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  88.0% (22/25)    IGHD3-22*01  20   ......-------------------------------------------------  25
J  97.8% (45/46)    IGHJ4*02     3    ---------...............G..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_318029

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           300     8e-84
IGHD5-18*01                                                                                           18.0    0.60 
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	218	26	0	89.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_236    4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  89.3% (218/244)  IGHV4-59*01  50   .....TCC...A....C.............G........G.AGT.A......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S  
                    Query_236    94   GGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGCC  183
V  89.3% (218/244)  IGHV4-59*01  140  .......G......T..........G.GC.............................A.T.A....A...................A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F  
                    Query_236    184  AGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTTG  273
V  89.3% (218/244)  IGHV4-59*01  230  .............G.....C..................A.......G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------------------------.......C.G..A..  15

                                      ------------------->                                  
                                      G  S  N  W  F  D  P  W  G  Q  G  P  L  V  P  V  S  S  
                    Query_236    274  GTTCTAACTGGTTCGACCCCTGGGGCCAGGGACCCCTGGTCCCCGTCTCCTCAG  327
D  83.3% (15/18)    IGHD5-18*01  16   ...---------------------------------------------------  18
J  95.9% (47/49)    IGHJ5*02     3    -----...........................A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_105972

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD6-6*01                                                                                            16.1    2.4  
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	T	GAGTTTAGCACCTC	CGCGGAGTATGCGCGCCG	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTGAGTTTAGCACCTCCGCGGAGTATGCGCGCCGATTACTACAATAACTACGCTATGGACGTC	ARVSLAPPRSMRADYYNNYAMDV	240	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_237    4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.8% (228/243)  IGHV4-59*01  50   .....TCC...A....C.........................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  N  Y  S  G  S  T  N  Y  N  S  S  L  K  S  R  V  T  I  S  L  D  T  S  K  S  
                    Query_237    94   GGATTGGGTATATTAATTACAGTGGGAGCACCAACTACAACTCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCCAAGAGCC  183
V  93.8% (228/243)  IGHV4-59*01  140  .............CT..........................C.............................G...............A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------------CDR3
                                      Q  F  S  L  E  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  V  S  L  A  P  P  R  S  M  
                    Query_237    184  AGTTCTCCCTGGAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTTCTGTGCGCGAGTGAGTTTAGCACCTCCGCGGAGTATGC  273
V  93.8% (228/243)  IGHV4-59*01  230  ...........A..C...............................G....A.......A...---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  85.7% (12/14)    IGHD6-6*01   1    ----------------------------------------------------------------....A.....G...------------  14

                                      -IMGT----------------------------->                                 
                                      R  A  D  Y  Y  N  N  Y  A  M  D  V  W  G  Q  G  P  T  V  S  V  S  S 
                    Query_237    274  GCGCCGATTACTACAATAACTACGCTATGGACGTCTGGGGCCAAGGGCCCACGGTCAGCGTCTCCTCA  341
J  90.3% (56/62)    IGHJ6*02     1    ------........T.CT......G......................A.........C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_105971

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHJ6*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGATGGCCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTC	VRQSSDGRTKYGMDV	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	71	3	0	95.9
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	108	6	0	94.7
CDR3-IMGT (germline)	292	299	8	7	1	0	87.5
Total	N/A	N/A	295	278	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  
                    Query_238    5    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCA  94
V  94.2% (278/295)  IGHV5-51*01  2    ....G........G..........................C.......................................AG........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  T  G  L  E  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  
                    Query_238    95   GTTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGTGGATGGGGATCATCTTTCCGGATGACTCTGATACCAGATACG  184
V  94.2% (278/295)  IGHV5-51*01  92   .C..................................A..........................A...T.G...................A  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      G  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_238    185  GCCCGTCCTTCCAAGGCCAGGTCACCATATCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACA  274
V  94.2% (278/295)  IGHV5-51*01  182  ............................C...................G.....................C...................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                           
                                      T  A  K  Y  Y  C  V  R  Q  S  S  D  G  R  T  K  Y  G  M  D  V  W  G  Q  G  P  T  V  S  V 
                    Query_238    275  CCGCCAAGTATTATTGTGTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGCCCACGGTCTCCGTC  363
V  94.2% (278/295)  IGHV5-51*01  272  ......T......C....C......----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                   
J  95.2% (40/42)    IGHJ6*02     15   -----------------------------------------------...........................A........A.....  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_105970

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           343     2e-96
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	N/A	TCCTTGCCCCCGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCCTTGCCCCCGAACTAC	ASLPPNY	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  T  T  H  T  M  K  W  V  R  Q  A  P  G  K  G  L  
                    Query_239    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCACTACCCATACCATGAAGTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  94.7% (232/245)  IGHV3-21*01  47   ....................................C.....G..G.T...G......C.................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  T  S  S  S  T  Y  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_239    91   AGTGGGTCGCATCCATTACTAGTAGTAGTACCTACACATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.7% (232/245)  IGHV3-21*01  137  ........T.........G...........GT....T.....................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  L  P  P  N  Y  W  G  
                    Query_239    181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGTCCTTGCCCCCGAACTACTGGGGCC  270
V  94.7% (232/245)  IGHV3-21*01  227  ....................................................G............-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  100.0% (39/39)   IGHJ4*02     10   ------------------------------------------------------------------------------............  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_239    271  AGGGAACCCTGGTCACCGTCTCCTCAG  297
J  100.0% (39/39)   IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_105977

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           300     8e-84
IGHD2-21*02                                                                                           14.1    8.6  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TCGCTG	GGTGACT	CCGCAACAACCACCAACCCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATCGCTGGGTGACTCCGCAACAACCACCAACCCTCTTTGACCAC	AKDRWVTPQQPPTLFDH	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  P  C  V  A  S  G  F  L  F  E  S  Y  A  M  T  W  V  R  Q  A  T  G  K  G  L  
                    Query_240    1    GGTCCCTGAGACTCCCCTGTGTAGCCTCTGGATTCCTGTTTGAAAGCTACGCCATGACCTGGGTCCGCCAGGCTACAGGGAAAGGGCTGG  90
V  88.4% (221/250)  IGHV3-23*01  47   ..............T......C.............ACC...AGC.....T.......G................C.......G.......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  F  G  H  S  T  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_240    91   AGTGGGTCTCCGGTATCAGTGGTTTTGGTCATAGCACATACTACGGAGACTCCGTCAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  88.4% (221/250)  IGHV3-23*01  137  ..........A.C...T......AG....GG..............C.........G..................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  G  G  D  T  A  I  Y  Y  C  A  K  D  R  W  V  T  P  Q  
                    Query_240    181  AGAACACGGTGTATCTGCAAATGAACAGCCTGAGAGGCGGCGACACGGCCATATATTATTGCGCGAAGGATCGCTGGGTGACTCCGCAAC  270
V  88.4% (221/250)  IGHV3-23*01  227  ........C...........................C..AG.........G.......C..T.....A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD2-21*02  14   ----------------------------------------------------------------------------.......-------  20

                                      GT-------------------->                                  
                                      Q  P  P  T  L  F  D  H  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_240    271  AACCACCAACCCTCTTTGACCACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  327
J  95.5% (42/44)    IGHJ4*02     5    -------------.......T..................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_105976

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           397     8e-113
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	CCGGCA	AGTACCAGCTGCT	CAACCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGCCGGCAAGTACCAGCTGCTCAACCCTGACTAC	AGAGKYQLLNPDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  T  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N  N  Y
                    Query_241    1    GCAGCTGGTGCAGTCTGGAACTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAACAACTA  90
V  93.8% (272/290)  IGHV1-69*01  6    ..................GG...............................................................G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  C  W  E  R  Q  A  P  G  Q  G  L  E  R  M  G  G  I  I  S  V  F  G  T  T  N  Y  A  Q
                    Query_241    91   TGCTATCTGCTGGGAGCGACAGGCCCCTGGACAAGGGCTTGAGCGGATGGGAGGGATCATCAGTGTCTTTGGTACAACAAACTACGCACA  180
V  93.8% (272/290)  IGHV1-69*01  96   .......A......T............................T.................CC.A...........G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  A  Y  M  E  L  S  S  L  T  S  E  D  T  A
                    Query_241    181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGCGCACAGCCTACATGGAGCTGAGTAGTCTGACATCTGAGGACACGGC  270
V  93.8% (272/290)  IGHV1-69*01  186  ...........................................A......................C..C....G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        L  Y  Y  C  A  G  A  G  K  Y  Q  L  L  N  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_241    271  CCTTTATTACTGTGCGGGAGCCGGCAAGTACCAGCTGCTCAACCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  93.8% (272/290)  IGHV1-69*01  276  .G.G............A...------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (13/13)   IGHD2-2*01   14   --------------------------.............-----------------------------------------------  26
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_105975

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           318     6e-89
IGHD5-12*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATTACATCGAGA	TGGCTAC	AATAGAGGAGTT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATTACATCGAGATGGCTACAATAGAGGAGTTTTTGCCTTC	ARELHRDGYNRGVFAF	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  R  T  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_242    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGGACCAATTACATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  91.1% (225/247)  IGHV3-53*01  47   ...........................................T.G...C........C..............................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      Q  W  V  S  L  I  H  S  G  G  T  T  S  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  K  S  T  
                    Query_242    91   AGTGGGTCTCACTTATTCATAGTGGTGGGACCACGTCCTATTCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAAGTCCACTA  180
V  91.1% (225/247)  IGHV3-53*01  137  ...........G.....T....C.....T.G...A.A...CG........................................T....AG.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  V  Y  L  Q  M  V  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  L  H  R  D  G  Y  N  
                    Query_242    181  ACACGGTATATCTTCAAATGGTCAACCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGAATTACATCGAGATGGCTACAATA  270
V  91.1% (225/247)  IGHV3-53*01  227  .....C.G............AA..G..........................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD5-12*01  11   -------------------------------------------------------------------------------.......----  17

                                      ---------------->                                  
                                      R  G  V  F  A  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_242    271  GAGGAGTTTTTGCCTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  321
J  93.0% (40/43)    IGHJ4*02     6    --------....A..A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_105974

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            276     3e-76
IGHD4-17*01                                                                                           14.1    8.5  
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGAGGCAGCAGG	CGGTGAC	AGGGCG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGAGGCAGCAGGCGGTGACAGGGCGGCTTTTGATATC	ARDQEAAGGDRAAFDI	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	21	6	0	77.8
FR2-IMGT	57	107	51	46	5	0	90.2
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	213	37	0	85.2


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  S  V  S  G  G  S  I  R  K  P  N  W  W  F  W  V  R  Q  A  P  G  K  G  
                    Query_243    1    GGTCCCTGAGACTCTCCTGCTCAGTCTCTGGGGGCTCCATCAGAAAACCTAACTGGTGGTTTTGGGTCCGCCAGGCCCCAGGGAAGGGTC  90
V  85.2% (213/250)  IGHV4-4*02   47   ..A.....TCC...A.....G.T........T...........C.GTAG..........AG.............C.............G.  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  K  I  Y  H  S  G  T  T  N  Y  N  P  S  L  E  S  R  V  I  I  S  V  D  K  S  
                    Query_243    91   TGGAGTGGATTGGGAAAATTTATCATAGTGGGACCACCAATTACAATCCGTCCCTCGAGAGTCGAGTCATCATTTCAGTGGACAAGTCCA  180
V  85.2% (213/250)  IGHV4-4*02   137  ..............G....C.............G......C.....C.........A............C...A.....A..........  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  V  F  S  L  R  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  Q  E  A  A  G  G  
                    Query_243    181  AGAACGTCTTCTCCTTGCGGCTGACCTCGGTGACCGCCGCGGACACAGCCATATATTACTGTGCGAGAGATCAGGAGGCAGCAGGCGGTG  270
V  85.2% (213/250)  IGHV4-4*02   227  .....CAG......C..AA.....G...T.................G...G.G.................--------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD4-17*01  7    -------------------------------------------------------------------------------------.....  11

                                      T------------------>                                  
                                      D  R  A  A  F  D  I  W  G  Q  G  R  M  V  V  V  S  S  
                    Query_243    271  ACAGGGCGGCTTTTGATATCTGGGGCCAAGGGAGAATGGTCGTCGTCTCTTCAG  324
D  100.0% (7/7)     IGHD4-17*01  12   ..----------------------------------------------------  13
J  93.5% (43/46)    IGHJ3*02     5    --------.........................C.......AC...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_318021

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           336     1e-94
IGHJ4*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCACA	N/A	N/A	ACTTTCCGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAACTTTCCGCTTC	TTTFRF	294	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	65	9	0	87.8
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	180	30	20	8	2	66.7
FR3-IMGT	181	293	114	96	17	1	84.2
CDR3-IMGT (germline)	294	299	6	6	0	0	100
Total	N/A	N/A	299	259	37	3	86.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  G  G  L  V  R  R  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  
                    Query_244    4    AGATGCAGCTGGTGCAGTCTGGAGGAGGCTTAGTAAGGCGGGGGGGGTCTCTTAGACTCTCTTGTGCAGCCTCTGGATTCACTTTCAGTA  93
V  86.6% (259/299)  IGHV3-15*01  2    ..G...........G.......G........G....A..CT........C...........C............................  91
                                         V  Q  L  V  E  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><----------CDR2-IMGT---------><
                                      K  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  L  I  K  K  K  E  E  G  E  T     
                    Query_244    94   AGGCCTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCTTATTAAAAAAAAAGAAGAAGGCGAGACAA---  180
V  86.6% (259/299)  IGHV3-15*01  92   .C..........G............................................G........GC...ACT..T..T.G.....CAG  181
                                      N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  

                                      ----------------------------------------------------FR3-IMGT------------------------------
                                      M  Y  A  V  A  V  K  D  R  F  T  I  S  R  D  D  S  T  N  T  V  Y  L  E  M  S  N  L  R  T  
                    Query_244    181  TGTATGCTGTAGCCGTGAAGGACAGATTCACCATCTCAAGAGATGACTCAACAAACACGGTATATCTGGAAATGAGCAACCTGAGAACCG  270
V  86.6% (259/299)  IGHV3-15*01  182  AC..C....C.C.......A.G........................T....A.......C.G......C......A..G.....A.....  271
                                      D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  

                                      ----------------------><----CDR3-IMGT--->                                  
                                      D  D  T  A  V  Y  Y  C  T  T  T  F  R  F  W  G  Q  G  M  M  V  T  V  S  S  
                    Query_244    271  ACGACACAGCCGTGTATTATTGTACCACAACTTTCCGCTTCTGGGGCCAGGGAATGATGGTCACCGTCTCCTCAG  345
V  86.6% (259/299)  IGHV3-15*01  272  .G.................C.........----------------------------------------------  300
                                      E  D  T  A  V  Y  Y  C  T  T                                               
J  91.4% (32/35)    IGHJ4*02     14   ----------------------------------------..............CCC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_318020

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           282     4e-78
IGHD4-17*01                                                                                           12.2    32   
IGHJ2*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACAGTTTTTATCCCCCGTCG	GACTAC	TT	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAACAGTTTTTATCCCCCGTCGGACTACTTCTTCGATCTC	ARDNSFYPPSDYFFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	93	21	0	81.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  K  N  Y  N  M  N  W  V  R  Q  V  P  G  K  G  L  
                    Query_245    1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAAGAACTACAACATGAACTGGGTCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  86.0% (215/250)  IGHV3-21*01  47   ....................G.....................GT.G...T.G....................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  S  R  N  N  D  I  Q  Y  A  D  S  M  R  G  R  V  I  I  S  R  D  N  V  
                    Query_245    91   AGTGGGTCTCATCGATTAGGAGTAGGAACAATGACATACAATACGCAGACTCAATGAGGGGCCGAGTCATCATCTCCAGGGACAATGTCA  180
V  86.0% (215/250)  IGHV3-21*01  137  .............C.....T.....T.GT.G.T.....T.C............G...A.......T...C.........A.....C.C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  S  S  L  Y  L  H  M  S  S  L  R  T  E  D  T  A  I  Y  F  C  A  R  D  N  S  F  Y  P  P  
                    Query_245    181  ACAGTTCTCTGTATCTCCACATGAGCAGCCTGCGAACCGAGGACACGGCTATCTATTTCTGTGCGAGAGATAACAGTTTTTATCCCCCGT  270
V  86.0% (215/250)  IGHV3-21*01  227  .G.AC..A........G..A....A.......A..G..............G.G....A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      T------------------>                                  
                                      S  D  Y  F  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_245    271  CGGACTACTTCTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCTTCAG  324
D  100.0% (6/6)     IGHD4-17*01  2    --......----------------------------------------------  7
J  97.7% (43/44)    IGHJ2*01     10   ----------.......................................C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_105979

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           352     3e-99
IGHD6-19*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATGGAATTAG	ATAGTAGTGGCTGGTAC	GACCTGTCGTCATCCAAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATGGAATTAGATAGTAGTGGCTGGTACGACCTGTCGTCATCCAATTTTGACTAC	ARMELDSSGWYDLSSSNFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	236	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  Y  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_246    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTTACTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.5% (236/247)  IGHV3-21*01  47   ....................................C.......AG.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  S  S  S  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_246    91   AGTGGGTCTCATCCATTAGTGGTAGTAGTAGTTCCATCTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.5% (236/247)  IGHV3-21*01  137  ....................A............A...A....................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  V  Q  L  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  M  E  L  D  S  S  G  
                    Query_246    181  AGAACTCACTGTATGTGCAACTGAATAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGGATGGAATTAGATAGTAGTGGCT  270
V  95.5% (236/247)  IGHV3-21*01  227  ..............C.....A....C..........C..............................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.1% (16/17)    IGHD6-19*01  5    ------------------------------------------------------------------------------....C.......  16

                                      R3-IMGT------------------------>                                  
                                      W  Y  D  L  S  S  S  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_246    271  GGTACGACCTGTCGTCATCCAATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  336
D  94.1% (16/17)    IGHD6-19*01  17   .....-------------------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------.......................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_327543

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           353     9e-100
IGHD3-3*01                                                                                            21.8    0.041 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGCCTCGTGCCTG	GGAGTGGTTAT	GAAGCCATACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGCCTCGTGCCTGGGAGTGGTTATGAAGCCATACCTGACTAC	AKSLVPGSGYEAIPDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_247    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTTAGCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (237/248)  IGHV3-23*01  47   ......................................T..................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  D  T  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_247    91   AATGGGTCTCAGGTATTAGTGGTAGTGGTGGTGACACATACTACGCAGACGCCGTGAAGGGCCGGTTCACCATTTCCAGAGACAATTCCA  180
V  95.6% (237/248)  IGHV3-23*01  137  .G..........C...................AG................T......................C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  F  C  A  K  S  L  V  P  G  S  G  
                    Query_247    181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTATATTTCTGTGCGAAAAGCCTCGTGCCTGGGAGTGGTT  270
V  95.6% (237/248)  IGHV3-23*01  227  ...A................................C....................A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD3-3*01   15   ---------------------------------------------------------------------------------.........  23

                                      T------------------>                                
                                      Y  E  A  I  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_247    271  ATGAAGCCATACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  322
D  100.0% (11/11)   IGHD3-3*01   24   ..--------------------------------------------------  25
J  100.0% (39/39)   IGHJ4*02     8    -------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_318024

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD1-26*01                                                                                           12.2    31   
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARAKGIAVIVDAFDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_248    1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ..................A.....................G............................C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  V  S  V  D  M  S  N  N 
                    Query_248    91   TGGATTGGATATATCTATTACAGAGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAGACATGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G..............T....G.....A......C.....CC................CA.A..........C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  K  G  I  A  V  I  V  D 
                    Query_248    181  CGGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGTGCGAGAGCTAAGGGTATCGCTGTTATAGTAGAT  270
V  90.6% (221/244)  IGHV4-59*01  229  .A...........AG.................T.......CG.....G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------------......----  8
J  91.8% (45/49)    IGHJ3*01     2    ---------------------------------------------------------------------------------------...  4

                                      ----------->                                  
                                       A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_248    271  GCTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  316
J  91.8% (45/49)    IGHJ3*01     5    .........G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_318027

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           325     3e-91
IGHD3-16*01                                                                                           12.2    31   
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GAGGAGAGACACG	GGGGGA	N/A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGAGAGGAGAGACACGGGGGGAGATGCTCTTCATATC	ATERRDTGGDALHI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  D  Y  E  F  N  W  V  R  Q  A  P  E  K  G  L  
                    Query_249    1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTCAGTGACTATGAATTCAACTGGGTCCGTCAGGCTCCGGAGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-48*03  47   .....................C......................AGT......A.G...........C........A.G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  W  S  D  G  S  P  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  I  
                    Query_249    91   AGTGGGTTTCATACATTTGGAGTGATGGAAGTCCCACATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACATCA  180
V  91.6% (229/250)  IGHV3-48*03  137  .................A.T...AG...T...A...T.................................................GC..  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  T  S  L  R  A  E  D  T  A  I  Y  Y  C  A  T  E  R  R  D  T  G  G  
                    Query_249    181  AGAACTCACTGTATCTGCAAATGACCAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGACAGAGAGGAGAGACACGGGGGGAG  270
V  91.6% (229/250)  IGHV3-48*03  227  ........................A.........................G...............G...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  18   -----------------------------------------------------------------------------------......-  23
J  91.8% (45/49)    IGHJ3*02     2    -----------------------------------------------------------------------------------------.  2

                                      ------------->                                  
                                      D  A  L  H  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_249    271  ATGCTCTTCATATCTGGGGCCAGGGAACAATGGTCACCGTCTCTTCAG  318
J  91.8% (45/49)    IGHJ3*02     3    .....T..G.............A..G......................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_318026

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           363     2e-102
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATTTGGTCGCCCCCTTCAAC	TACTATGATA	ATTACTCGGGAAGTAAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATTTGGTCGCCCCCTTCAACTACTATGATAATTACTCGGGAAGTAATTGGTTCGACCGC	ARNLVAPFNYYDNYSGSNWFDR	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_250    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (240/248)  IGHV3-48*03  47   ............................................A.............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  S  S  G  A  T  R  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_250    91   AGTGGCTTTCATACATCAGTAGTAGTGGTGCTACCAGATTCTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (240/248)  IGHV3-48*03  137  .....G..........T............AG.....T..A..................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  N  L  V  A  P  F  N  
                    Query_250    181  AGAACTCACTGTATCTGCAAATCAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAAATTTGGTCGCCCCCTTCAACT  270
V  96.8% (240/248)  IGHV3-48*03  227  ......................G.............................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  5    -----------------------------------------------------------------------------------------.  5

                                      -CDR3-IMGT--------------------------->                                  
                                      Y  Y  D  N  Y  S  G  S  N  W  F  D  R  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_250    271  ACTATGATAATTACTCGGGAAGTAATTGGTTCGACCGCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  342
D  100.0% (10/10)   IGHD3-22*01  6    .........---------------------------------------------------------------  14
J  95.7% (44/46)    IGHJ5*02     6    --------------------------..........C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_140921

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD1-26*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCATACGCC	GTGGGAG	GAAGGGATACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATACGCCGTGGGAGGAAGGGATACCCCTTGACTAC	AKDHTPWEEGIPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  L  S  R  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_251    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCATGCTTAGCAGATTTGCCATGAGTTGGGTCCGCCAGGCCCCTGGGAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-23*01  47   ............................T.......CCT.......C.A.........C..............T..A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  D  N  T  Y  Y  A  D  S  L  K  G  Q  F  S  I  S  R  D  S  S  
                    Query_251    91   AGTGGGTCTCAGGTATCAGCGGAAGTGGTGATAACACATATTATGCAGACTCCTTGAAGGGCCAGTTCTCCATCTCCAGAGACAGTTCCA  180
V  91.2% (228/250)  IGHV3-23*01  137  ............C...T..T..T.......G..G......C..C.........G.........G....A...............A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  H  T  P  W  E  E  
                    Query_251    181  AGAACACGCTGTATCTGCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCATACGCCGTGGGAGGAAG  270
V  91.2% (228/250)  IGHV3-23*01  227  ......................G...............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD1-26*01  7    -------------------------------------------------------------------------------.......----  13

                                      ---------------->                                  
                                      G  I  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_251    271  GGATACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_140920

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD6-13*01                                                                                           12.2    31   
IGHJ4*01                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGA	GGGGATAGC	TGTTGCGCAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGAGGGGATAGCTGTTGCGCAGTTTGACAAG	ARDEGIAVAQFDK	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  D  S  I  S  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_252    1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGACTCCATCAGTGATTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.0% (223/245)  IGHV4-59*01  49   ...................C...........G..........AG...C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Q  S  G  N  T  D  Y  N  P  S  L  K  S  R  V  S  M  S  I  D  L  S  R  N 
                    Query_252    91   TGGATTGGTTATATCTATCAGAGTGGGAACACCGATTACAACCCCTCCCTCAAGAGTCGAGTCTCCATGTCAATAGACCTGTCCAGGAAC  180
V  91.0% (223/245)  IGHV4-59*01  139  ........G.........T.C.......G....A.C...........................A....A...G.....AC.....A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  E  G  I  A  V  A  Q  F 
                    Query_252    181  CAATTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCATTTATTATTGTGCGAGAGATGAGGGGATAGCTGTTGCGCAGTTT  270
V  91.0% (223/245)  IGHV4-59*01  229  ..G.................C........................G.G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (8/9)      IGHD6-13*01  1    --------------------------------------------------------------------...T.....-------------  9
J  90.7% (39/43)    IGHJ4*01     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  K  W  G  R  G  T  L  V  T  V  S  S  
                    Query_252    271  GACAAGTGGGGCCGCGGAACCCTGGTCACCGTCTCCTCAG  310
J  90.7% (39/43)    IGHJ4*01     9    ...T.C.......AA.........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_140927

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           357     1e-100
IGHD5-18*01                                                                                           12.2    32    
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAACGCCGGGTC	GGTTAC	AAATCCG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAACGCCGGGTCGGTTACAAATCCGACGGTATGAATGTC	ARDKRRVGYKSDGMNV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_253    1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACTTTCAGAAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-33*01  47   .....................................C.....T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  S  D  G  S  D  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_253    91   AGTGGGTGGCAGTTATTTGGTCTGATGGAAGTGATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATAGTA  180
V  95.6% (239/250)  IGHV3-33*01  137  ................A....A..........A.....................................................TCC.  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  V  Y  F  C  A  R  D  K  R  R  V  G  Y  
                    Query_253    181  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGAACCGAGGACACGGCTGTGTATTTCTGTGCGAGAGATAAACGCCGGGTCGGTTACA  270
V  95.6% (239/250)  IGHV3-33*01  227  ........C..........................G.....................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD5-18*01  15   -----------------------------------------------------------------------------------......-  20

                                      T------------------>                                 
                                      K  S  D  G  M  N  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_253    271  AATCCGACGGTATGAATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  95.7% (45/47)    IGHJ6*02     16   ------........G.C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_140925

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           286     1e-79
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	237	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	20	23	4	4	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	20	4	0	83.3
FR3-IMGT	123	236	114	105	9	0	92.1
Total	N/A	N/A	217	200	17	0	92.2


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  N
                    Query_254    20   GTCTGGATTCACCTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGGAGTGGGTGGCAGTTATCTGGTATAA  109
V  92.2% (200/217)  IGHV3-33*03  72   ...............C.....C.....C................................G....................A......G.  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  I  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  F  L  Q  M  N
                    Query_254    110  TGGAATTAACAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCAAGAACACCCTGTTTCTGCAGATGAA  199
V  92.2% (200/217)  IGHV3-33*03  162  .....G...T................................................A.............G....A......A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------CDR3-IMGT----------->                    
                                        S  L  R  A  D  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  D  P  W  G  Q  G  T  L  V
                    Query_254    200  CAGCCTGAGAGCCGACGACACCGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCGACCCCTGGGGCCAGGGTACCCTGGT  289
V  92.2% (200/217)  IGHV3-33*03  252  ...............G.....G...G.G.....C...-----------------------------------------------------  288
                                        S  L  R  A  E  D  T  A  V  Y  Y  C                                                      
D  90.9% (10/11)    IGHD6-13*01  7    ------------------------------------------....G......-------------------------------------  17
J  97.8% (45/46)    IGHJ5*02     6    ----------------------------------------------------------.......................A........  37

                                                    
                                        T  V  S  S  
                    Query_254    290  CACCGTCTCCTCAG  303
J  97.8% (45/46)    IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_140924

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            394     6e-112
IGHD3-16*01                                                                                           12.2    34    
IGHJ3*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GCTTCC	TGGGGG	CCATGAGA	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATC	ARGFLGAMRDGLDI	269	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	154	27	27	0	0	100
FR3-IMGT	155	268	114	109	5	0	95.6
CDR3-IMGT (germline)	269	275	7	7	0	0	100
Total	N/A	N/A	274	263	11	0	96


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  D  T  W  N  W  I  R 
                    Query_255    2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGATACTTGGAACTGGATCAGG  91
V  96.0% (263/274)  IGHV6-1*01   31   ........G...T.G.......................................................C.G.................  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 
                    Query_255    92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGGAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGA  181
V  96.0% (263/274)  IGHV6-1*01   121  ................................A.........................................................  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  I  N  P  D  S  S  K  N  Q  F  S  L  Q  L  N  S  V  T  F  E  D  T  A  V  Y  F  C  A 
                    Query_255    182  ATAACCATTAACCCAGACTCATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTTTCGAGGACACGGCTGTGTATTTCTGTGCA  271
V  96.0% (263/274)  IGHV6-1*01   211  ........C.........A.........................................CC....................A.......  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------------CDR3-IMGT--------------->                                  
                                       R  G  F  L  G  A  M  R  D  G  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_255    272  AGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  344
V  96.0% (263/274)  IGHV6-1*01   301  ....---------------------------------------------------------------------  304
                                       R                                                                       
D  100.0% (6/6)     IGHD3-16*01  17   ----------......---------------------------------------------------------  22
J  95.9% (47/49)    IGHJ3*02     2    ------------------------....C...T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_140929

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            350     8e-99
IGHD6-6*01                                                                                            14.1    8.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAGGC	GCAGTTCGTC	GCGAATGAGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAGGCGCAGTTCGTCGCGAATGAGCCTTGACTCC	ARDRRSSSRMSLDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  G  V  S  G  A  S  I  S  S  S  D  W  W  I  W  V  R  Q  S  P  G  K  G  L 
                    Query_256   1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGCGCCTCCATCAGCAGTAGTGACTGGTGGATTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  90
V  95.2% (236/248)  IGHV4-4*02  49   ...................C.........T.G................A.........G.............C.................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  E  I  R  V  T  I  S  V  E  K  S  K 
                    Query_256   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCGAGATTCGAGTCACCATATCAGTAGAGAAGTCCAAG  180
V  95.2% (236/248)  IGHV4-4*02  139  ......................................................A...G.....................C.........  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  D  R  R  S  S  S  R  M 
                    Query_256   181  AACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCCTGTATTACTGTGCGAGAGACAGGCGCAGTTCGTCGCGAATG  270
V  95.2% (236/248)  IGHV4-4*02  229  ................A.....G.........................G...................----------------------  296
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  90.0% (9/10)     IGHD6-6*01  8    -------------------------------------------------------------------------....C.....-------  17

                                     ----------->                                  
                                      S  L  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_256   271  AGCCTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.6% (41/42)    IGHJ4*02    7    ----......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_140928

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            338     5e-95
IGHD6-6*01                                                                                            12.2    32   
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CAAG	TCGTCC	GAAATCGACA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACAAGTCGTCCGAAATCGACAACTTCTACGGTTTGGACGTC	AKDKSSEIDNFYGLDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  F  G  F  T  F  E  D  Y  A  M  H  W  V  R  Q  G  P  G  K  G  L  
                    Query_257   1    GGTCCCTGAGACTCTCCTGTGCAGCCTTTGGATTCACGTTTGAAGATTATGCCATGCACTGGGTCCGGCAAGGTCCAGGGAAGGGCCTGG  90
V  93.2% (233/250)  IGHV3-9*01  47   ...........................C.........C.....T............................C.................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  I  S  W  N  G  Y  T  I  A  Y  A  D  S  V  K  G  R  F  T  L  S  R  D  N  A  
                    Query_257   91   AATGGGTCTCAGGAATTAGTTGGAATGGTTATACCATAGCCTATGCGGACTCTGTGAAGGGCCGATTCACCCTCTCCAGAGACAACGCCA  180
V  93.2% (233/250)  IGHV3-9*01  137  .G...........T............A..GG..G.....G...............................A..................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                     R  N  S  L  Y  L  Q  M  N  S  L  G  A  D  D  T  A  F  Y  Y  C  A  K  D  K  S  S  E  I  D  
                    Query_257   181  GGAACTCCCTGTATCTGCAAATGAACAGTCTGGGAGCTGACGACACGGCCTTCTATTATTGTGCAAAAGACAAGTCGTCCGAAATCGACA  270
V  93.2% (233/250)  IGHV3-9*01  227  A...............................A.......G...........G.....C...........--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD6-6*01  13   --------------------------------------------------------------------------......----------  18

                                     T------------------>                                 
                                     N  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_257   271  ACTTCTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.2% (51/53)    IGHJ6*02    10   ...A.......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_4578

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     3e-91
IGHD1-26*01                                                                                           12.2    33   
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGAAAGCAC	ATAGTG	ACCACTAAATGGATGGT	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGAAAGCACATAGTGACCACTAAATGGATGGTTGAAGCTTTTGATAAC	AKRKHIVTTKWMVEAFDN	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  A  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_258    1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTTGCCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTAG  90
V  91.9% (228/248)  IGHV3-23*01  47   ....................G....................AG..............G..............................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  M  S  G  S  G  A  E  T  Y  L  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_258    91   AGTGGGTCTCAGGTATGAGTGGTAGTGGTGCTGAAACATACCTCGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCCGAGACAATTCCA  180
V  91.9% (228/248)  IGHV3-23*01  137  ............C...T.............G.AGC......TA..................................A............  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  F  L  E  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  R  K  H  I  V  T  T  
                    Query_258    181  AGAACACACTATTTCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATATTATTGTGCGAAAAGAAAGCACATAGTGACCACTA  270
V  91.9% (228/248)  IGHV3-23*01  227  .......G..G.A....C................................G.......C.........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-26*01  4    -----------------------------------------------------------------------------......-------  9

                                      IMGT--------------------->                                  
                                      K  W  M  V  E  A  F  D  N  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_258    271  AATGGATGGTTGAAGCTTTTGATAACTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  330
J  96.0% (48/50)    IGHJ3*02     1    ----------...T..........T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_340284

Length=428
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           321     8e-90
IGHD6-13*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              73.7    3e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCCATCCCGAGGGGGA	AGCAGCAGCTGGTAC	CGAAAGGGGC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCCATCCCGAGGGGGAAGCAGCAGCTGGTACCGAAAGGGGCACTTCTACGCAATGGATGTC	ASPSRGGSSSWYRKGHFYAMDV	305	370	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	115	45	20	4	21	44.4
FR2-IMGT	116	166	51	48	3	0	94.1
CDR2-IMGT	167	190	24	15	9	0	62.5
FR3-IMGT	191	304	114	104	10	0	91.2
CDR3-IMGT (germline)	305	309	5	5	0	0	100
Total	N/A	N/A	309	259	29	21	83.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-----------------CD
                                        Q  L  V  Q  S  G  A  E  V  T  K  P  G  S  S  V  K  I  S  C  K  A  S  G  G  T  F  R  S  S
                    Query_259    1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGACGAAGCCTGGGTCCTCGGTGAAGATCTCCTGCAAGGCTTCTGGAGGCACCTTCAGGTCTTC  90
V  83.8% (259/309)  IGHV1-69*01  6    ..................G..........A......................G...............................C-----  90
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S      

                                      R1-IMGT-----------------><--------------------FR2-IMGT---------------------><-------CDR2-I
                                        G  Y  T  F  G  T  Y  A  M  T  W  V  R  Q  A  P  G  Q  G  L  E  W  I  G  G  L  I  A  I  A
                    Query_259    91   TGGATACACCTTCGGAACTTATGCCATGACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATAGGAGGGCTCATCGCCATCGC  180
V  83.8% (259/309)  IGHV1-69*01  91   ----------------.GC.....T..C.G.......................................G......A.....C.T...TT  164
                                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F

                                      MGT------><----------------------------------------------------FR3-IMGT-------------------
                                        G  V  I  S  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  A  N  T  A  Y  L  E  V  S  G
                    Query_259    181  TGGTGTAATAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCGGCGAATACTGCCTACTTGGAGGTGAGCGG  270
V  83.8% (259/309)  IGHV1-69*01  165  ....AC.GC..A................................................CA...GC..A......A.....C.....A.  254
                                        G  T  A  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S

                                      ---------------------------------><----------------------------CDR3-IMGT------------------
                                        L  R  S  E  D  T  A  V  Y  Y  C  A  S  P  S  R  G  G  S  S  S  W  Y  R  K  G  H  F  Y  A
                    Query_259    271  CCTGAGATCTGAGGACACGGCCGTCTATTACTGTGCGAGCCCATCCCGAGGGGGAAGCAGCAGCTGGTACCGAAAGGGGCACTTCTACGC  360
V  83.8% (259/309)  IGHV1-69*01  255  ........................G..............---------------------------------------------------  293
                                        L  R  S  E  D  T  A  V  Y  Y  C  A                                                      
D  100.0% (15/15)   IGHD6-13*01  7    -------------------------------------------------------...............--------------------  21
J  90.6% (48/53)    IGHJ6*02     10   --------------------------------------------------------------------------------...A.....G  19

                                      --------->                                 
                                        M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_259    361  AATGGATGTCTGGGGCCAAGGGGCCACGGTCACCGTCTCCTCA  403
J  90.6% (48/53)    IGHJ6*02     20   T.....C...............A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 42076800


Query= Query_340285

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           332     3e-93
IGHD2-21*02                                                                                           14.1    8.0  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTTCA	GGTGACT	CTG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTTCAGGTGACTCTGGACTAC	AKDLQVTLDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_260    1    GGTCCCTGAGACTCTCCTGTGCAGCATCTGGATTCACCTTCAGTAGTTATGCCATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-30*04  47   .........................C....................C.....T..........................C..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  E  K  Y  H  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_260    91   AATGGGTGGCAGTTATATCATATGATGGAAGTGAGAAATATCACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  92.4% (231/250)  IGHV3-30*04  137  .G..............................A.T.....CT...............A...........................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  G  G  D  T  A  I  Y  Y  C  A  K  D  L  Q  V  T  L  D  
                    Query_260    181  AGAACACGCTGTACTTGCAAATGAACAGCCTTAGAGGTGGGGACACGGCTATATATTACTGTGCGAAAGATCTTCAGGTGACTCTGGACT  270
V  92.4% (231/250)  IGHV3-30*04  227  .............TC................G....C..A..........G.G.............G...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-21*02  14   ----------------------------------------------------------------------------.......-------  20
J  97.5% (39/40)    IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                  
                                      Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_260    271  ACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  306
J  97.5% (39/40)    IGHJ4*02     13   ..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_340286

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            335     4e-94
IGHD3-22*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAGG	ATTACTTTGATAGGAGT	CGTCACGACGAATT	CGGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCAGGATTACTTTGATAGGAGTCGTCACGACGAATTCGGTCTGGACGTC	ARDQDYFDRSRHDEFGLDV	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  D  S  F  S  G  D  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_261    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCTTCAGTGGCGATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.1% (231/248)  IGHV4-4*02   49   ...............................G....A....CA.TAG...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  A  I  I  S  I  D  K  S  N 
                    Query_261    91   GAGTGGATTGGGGAAGTCTATGATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGCCATCATATCAATAGACAAGTCCAAC  180
V  93.1% (231/248)  IGHV4-4*02   139  ...............A.....C..........................................T..C.......G.............G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       K  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  D  Y  F  D  R  S 
                    Query_261    181  AAACAGTTCTCCCTAAAACTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGACCAGGATTACTTTGATAGGAGT  270
V  93.1% (231/248)  IGHV4-4*02   229  ..C...........G..G....G.............................................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  88.2% (15/17)    IGHD3-22*01  3    -------------------------------------------------------------------------......A......T...  19

                                      MGT----------------------->                                 
                                       R  H  D  E  F  G  L  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_261    271  CGTCACGACGAATTCGGTCTGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  330
J  95.7% (44/46)    IGHJ6*02     17   --------------....A.......................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_340287

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           271     7e-75
IGHD4-17*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGCGGCAC	TGACTCCGTTGACT	CCGGGGGGGCCGCTCCGCGGGAGGTG	GGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGACGGCGGCACTGACTCCGTTGACTCCGGGGGGGCCGCTCCGCGGGAGGTGGGTCTGGACGTC	VRDGGTDSVDSGGAAPREVGLDV	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	21	24	4	4	0	0	100
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	47	4	0	92.2
CDR2-IMGT	100	123	24	18	6	0	75
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	225	199	26	0	88.4


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  N  G  Y  A  I  H  W  V  R  R  A  P  G  K  G  L  E  W  V  A  I  I  W  V  D
                    Query_262    21   GTCTGGATTCACCTTCAATGGCTATGCCATACACTGGGTCCGCCGGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCCATTATTTGGGTTGA  110
V  88.4% (199/225)  IGHV3-33*01  72   .................G.A......G...G.............A..............................AG....A...TA...  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  N  T  Q  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  K  N  T  V  Y  L  *  M  N
                    Query_262    111  TGGAAATACTCAAAACTATGCTGACTCCGTGAAGGGCCGATTCACCGTTTCCAGAGACAATTCCAAGAACACAGTGTATTTGTAAATGAA  200
V  88.4% (199/225)  IGHV3-33*01  162  .....G..A.A..T.......A........................A.C.......................GC.....C..C.......  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------------------CDR3-IMGT--------------
                                        S  L  T  A  E  D  T  A  V  Y  Y  C  V  R  D  G  G  T  D  S  V  D  S  G  G  A  A  P  R  E
                    Query_262    201  CAGCCTGACGGCCGAAGACACGGCTGTCTATTACTGTGTGAGAGACGGCGGCACTGACTCCGTTGACTCCGGGGGGGCCGCTCCGCGGGA  290
V  88.4% (199/225)  IGHV3-33*01  252  ........GA.....G...........G..........C......---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  85.7% (12/14)    IGHD4-17*01  1    ------------------------------------------------------.....A..G.....----------------------  14

                                      --------------->                                 
                                        V  G  L  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_262    291  GGTGGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  339
J  95.6% (43/45)    IGHJ6*02     18   ----...A..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_340280

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           321     7e-90
IGHD2-15*01                                                                                           18.0    0.58 
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTGTAGTGG	GAATACTTGCTACACG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTGTAGTGGGAATACTTGCTACACGGATGCTTTTGATATC	ARHCSGNTCYTDAFDI	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  L  S  P  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_263    1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCTTTGAGTCCTTACTACTGGAGCTGGGTCAGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*08  49   ..................A............G...CA.C...AG................A..C..........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  T  R  V  T  L  S  V  D  T  S  K  Q 
                    Query_263    91   TGGATTGGCTATATCTATTACAGGGGGAACACCAACTACAACCCCTCCCTCAAGACTCGAGTCACCTTATCAGTTGACACGTCCAAGCAG  180
V  91.8% (225/245)  IGHV4-59*08  139  ........G..............T....G..........................G..........A.......A............A.C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  C  S  G  N  T  C  Y  T 
                    Query_263    181  CAGTTCTCCCTGAAATTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATTGTAGTGGGAATACTTGCTACACG  270
V  91.8% (225/245)  IGHV4-59*08  229  ..............GC...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD2-15*01  7    -----------------------------------------------------------------.........----------------  15

                                      -------------->                                  
                                       D  A  F  D  I  W  G  Q  G  T  T  V  T  V  S  S  
                    Query_263    271  GATGCTTTTGATATCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCAG  319
J  95.9% (47/49)    IGHJ3*02     2    .............................A.T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_340281

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           286     1e-79
IGHD3-10*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	AGACCAAGG	GGTTCGGGGACTTA	CTGCAGCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGACCAAGGGGTTCGGGGACTTACTGCAGCCCTTTGACCAC	VKTKGFGDLLQPFDH	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	19	7	0	73.1
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	126	24	20	4	0	83.3
FR3-IMGT	127	240	114	104	10	0	91.2
CDR3-IMGT (germline)	241	244	4	3	1	0	75
Total	N/A	N/A	243	213	30	0	87.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  E  T  S  G  F  T  L  T  S  S  T  M  N  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_264    2    CCCTGTCCCTCACCTGCGAAACCTCTGGATTCACCTTGACTAGTTCCACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  87.7% (213/243)  IGHV3-21*01  50   .....AGA...T....T.C.G................C.G...C.AT.G.........................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  A  S  I  T  S  G  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  K  
                    Query_264    92   GGGTCGCATCTATTACTAGTGGAAGTACTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCAAGA  181
V  87.7% (213/243)  IGHV3-21*01  140  .....T....C....G....A.T....G........................................A.....................  229
                                      W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><-----------------CDR3-IMGT----
                                      N  S  L  F  L  Q  L  S  G  L  R  V  E  D  T  A  V  Y  S  C  V  K  T  K  G  F  G  D  L  L  
                    Query_264    182  ACTCACTGTTTCTGCAACTGAGTGGCCTGAGAGTCGAGGACACGGCAGTCTATTCCTGTGTGAAGACCAAGGGGTTCGGGGACTTACTGC  271
V  87.7% (213/243)  IGHV3-21*01  230  .........A.......A...ACA.........C............T..G....A.....C..---------------------------  292
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  92.9% (13/14)    IGHD3-10*01  11   ------------------------------------------------------------------------..........G...----  24

                                      ------------->                                  
                                      Q  P  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_264    272  AGCCCTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  97.7% (43/44)    IGHJ4*02     5    ----.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_42289

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         363     1e-102
IGHD4-17*01                                                                                           18.0    0.61  
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCCCAA	TACGCTGACTAC	GAAGACAATCTGGCTTTG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGATTCCCAATACGCTGACTACGAAGACAATCTGGCTTTGTACGGTATGGACGTC	TRDSQYADYEDNLALYGMDV	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	248	8	7	1	0	87.5
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_265      1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCATCAGCAGTGGTTACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  96.8% (240/248)  IGHV4-38-2*02  49   ..................A.......................................................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  H  S  G  S  T  H  Y  T  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_265      91   GAGTGGATTGGGAGTATCTATCATAGTGGGAGCACACACTACACCCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAG  180
V  96.8% (240/248)  IGHV4-38-2*02  139  ...................................CT......A..............................................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-------------------------CDR3
                                         N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  D  S  Q  Y  A  D  Y  E 
                    Query_265      181  AACCAGTTCTCCCTGAACCTGAATTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTACGAGAGATTCCCAATACGCTGACTACGAA  270
V  96.8% (240/248)  IGHV4-38-2*02  229  .................G....GC....................................G.......----------------------  296
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  91.7% (11/12)    IGHD4-17*01    5    ---------------------------------------------------------------------------....G.......---  16

                                        -IMGT------------------------>                                 
                                         D  N  L  A  L  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_265      271  GACAATCTGGCTTTGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
J  100.0% (48/48)   IGHJ6*02       15   ---------------................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_42286

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           352     3e-99
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCGTGCTGTTA	ACTATGATAGTGGTG	ATTCCGGTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CGTGCTGTTAACTATGATAGTGGTGATTCCGGTTGGTACTTTGACTAC	RAVNYDSGDSGWYFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	241	113	109	4	0	96.5
Total	N/A	N/A	241	233	8	0	96.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_266    1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACTTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.7% (233/241)  IGHV3-33*01  47   .....................................C.......G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  E  K  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  S  
                    Query_266    91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTGAAAAATACTATGCAGACTCCTTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.7% (233/241)  IGHV3-33*01  137  ................................A.T..................G....................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  R  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  R  A  V  N  Y  D  S  G  D  
                    Query_266    181  AGCGCACACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGCCGTGCTGTTAACTATGATAGTGGTGATT  270
V  96.7% (233/241)  IGHV3-33*01  227  ..AA...G.....................................................-----------------------------  287
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                
D  93.3% (14/15)    IGHD3-22*01  6    ------------------------------------------------------------------------...........A...---  20

                                      T------------------>                                  
                                      S  G  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_266    271  CCGGTTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (46/46)   IGHJ4*02     3    --------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_42287

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           335     4e-94
IGHD6-25*01                                                                                           12.2    31   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-25*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGGG	GCATCGGCT	GAGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGGGCATCGGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
Total	N/A	N/A	242	228	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_267    1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.2% (228/242)  IGHV3-33*03  47   .....................................C..C.....C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  K  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_267    91   AGTGGGTGGCAGTTATATGGTATGATGGAATTAAAAAATACTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCA  180
V  94.2% (228/242)  IGHV3-33*03  137  ..............................G...T..........C.....................................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_267    181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGGGCATCGGCTGAGGGGTGGTTCG  270
V  94.2% (228/242)  IGHV3-33*03  227  .......G....A......A..............................G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  88.9% (8/9)      IGHD6-25*01  8    --------------------------------------------------------------------...G.....-------------  16
J  100.0% (46/46)   IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_267    271  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (46/46)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_42284

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           343     2e-96
IGHD2-21*01                                                                                           18.0    0.69 
IGHJ4*01                                                                                              58.4    1e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-21*01	IGHJ4*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CG	ATTGCGGTGGTG	TAGTGATGGAACTTGTTACTCTGGTTCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTAT	ARRLRWCSDGTCYSGSFEY	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	70	4	0	94.6
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	90	24	0	78.9
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	256	37	0	87.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  R  E  S  L  K  I  S  C  K  G  T  G  Y  S  F  A  
                    Query_268    5    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGAGGGAGTCTCTGAAGATCTCCTGTAAGGGGACTGGATACAGTTTTGCCA  94
V  87.4% (256/293)  IGHV5-51*03  2    ..................................A......G............................TT..........C...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  H  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  T  D  S  E  T  H  Y  
                    Query_268    95   CACACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTACTGACTCTGAAACCCACTACA  184
V  87.4% (256/293)  IGHV5-51*03  92   GCT.............................................................T...GG.........T...AGA....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  R  C  Q  V  T  I  S  A  D  R  S  I  P  T  T  Y  L  Q  W  N  S  W  G  A  A  D  
                    Query_268    185  GCCCGTCCTTCCGATGCCAGGTCACCATCTCAGCAGACAGATCCATCCCTACCACCTACCTGCAGTGGAACTCTTGGGGGGCCGCGGACG  274
V  87.4% (256/293)  IGHV5-51*03  182  ............A.G...................C....AG......AGC...G...............G.AGCCT.AA....T.....A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      A  S  I  Y  Y  C  A  R  R  L  R  W  C  S  D  G  T  C  Y  S  G  S  F  E  Y  W  G  H  *  T  
                    Query_268    275  CCTCCATTTATTACTGTGCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTATTGGGGCCATTGAACCC  364
V  87.4% (256/293)  IGHV5-51*03  272  ..G....G...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  91.7% (11/12)    IGHD2-21*01  6    -------------------------....T.......-----------------------------------------------------  17
J  90.5% (38/42)    IGHJ4*01     6    -----------------------------------------------------------------.....C..C........AG......  30

                                                       
                                      L  V  T  V  S  S 
                    Query_268    365  TGGTCACCGTCTCCTCA  381
J  90.5% (38/42)    IGHJ4*01     31   .................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_42285

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            399     3e-113
IGHD3-10*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	TGAC	TGGTTCGGGGA	CTT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGTGACTGGTTCGGGGACTTACTCCTTTGATTAC	AGVTGSGTYSFDY	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	102	12	0	89.5
CDR3-IMGT (germline)	289	295	7	6	1	0	85.7
Total	N/A	N/A	295	275	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  G 
                    Query_269    1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCGGC  90
V  93.2% (275/295)  IGHV1-8*02   1    ...G...................G...............................................................AC.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  D  Y 
                    Query_269    91   AGCTATGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATGAATCCTAACAGTGGGAACACAGACTAT  180
V  93.2% (275/295)  IGHV1-8*02   91   ..............................A..................................C...........T.......G....  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  Y  M  E  L  S  S  L  G  S  A  D 
                    Query_269    181  GCACAGAAGTTCCGGGGCAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCTACATGGAGCTGAGTAGTCTGGGATCTGCCGAC  270
V  93.2% (275/295)  IGHV1-8*02   181  .............A.......................A...C..C.T........................C..C...A......AG...  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  Y  C  A  G  V  T  G  S  G  T  Y  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_269    271  ACGGCCGTCTATTACTGTGCGGGAGTGACTGGTTCGGGGACTTACTCCTTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  360
V  93.2% (275/295)  IGHV1-8*02   271  ........G............A...-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (11/11)   IGHD3-10*01  10   -----------------------------...........--------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    -------------------------------------------...A......C....................................  47

                                       
                                       
                    Query_269    361  G  361
J  95.8% (46/48)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_340288

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           346     2e-97
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGCGGGGGGGG	ATTACTATGAGAATAGTGGTTATT	GGCTG	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGCGGGGGGGGATTACTATGAGAATAGTGGTTATTGGCTGGACTTC	ARAAGGDYYENSGYWLDF	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_270    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTCAGTAGCTACACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-21*01  47   ....................................CC...........T.G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  R  V  S  K  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  A  S  R  D  N  A  
                    Query_270    91   AGTGGGTCTCATCCATTAGTCGTGTTAGTAAGTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCGCGTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-21*01  137  ....................A..AG.....GT.......................................ATC................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  A  A  G  G  D  Y  Y  
                    Query_270    181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGAGAGCGGCGGGGGGGGATTACTATG  270
V  94.4% (235/249)  IGHV3-21*01  227  ..................................................G.G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (22/24)    IGHD3-22*01  3    ---------------------------------------------------------------------------------.........  11

                                      IMGT--------------------->                                  
                                      E  N  S  G  Y  W  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_270    271  AGAATAGTGGTTATTGGCTGGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  91.7% (22/24)    IGHD3-22*01  12   .T.G...........---------------------------------------------  26
J  97.5% (39/40)    IGHJ4*02     9    --------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_42280

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_271    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG..G.T..................................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_271    91   TGGATTGGATATATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  93.4% (228/244)  IGHV4-59*01  139  ........G...................G.....A............................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W 
                    Query_271    181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------------------------------------------....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_271    271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (35/35)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_42281

Length=218
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           209     2e-56
IGHJ4*01                                                                                              71.8    5e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	N/A	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TATAT	N/A	N/A	N/A	TTTGA	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	151	6	5	1	0	83.3
Total	N/A	N/A	151	142	9	0	94


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  E  K  P  G  E  S  L  K  I  S  C  K  G  S  G  H  S  F  I  G  H
                    Query_272    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGGAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCCGGACACAGCTTTATCGGCCA  90
V  94.0% (142/151)  IGHV5-51*03  6    ............................A........................................T...T.........C.A..T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------>           
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  M  I  Y  F  D  S  W  G  H  G  T  L  V
                    Query_272    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGAAAAGGCCTGGAGTGGATGGGGATGATATATTTTGACTCCTGGGGCCACGGAACCCTGGT  180
V  94.0% (142/151)  IGHV5-51*03  96   ..............................G.......................C..C...-----------------------------  156
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y                              
J  95.3% (41/43)    IGHJ4*01     6    -------------------------------------------------------------.......A.........A...........  34

                                                    
                                        T  V  S  S  
                    Query_272    181  CACCGTCTCCTCAG  194
J  95.3% (41/43)    IGHJ4*01     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 20350080


Query= Query_231045

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           343     2e-96
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCTCGTTTATG	ATGGTTCGGGGAGT	CCTCCCGAAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTCGTTTATGATGGTTCGGGGAGTCCTCCCGAAGGACTAC	ARLSFMMVRGVLPKDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  V  N  S  G  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_273    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCGTCAACAGTGGTGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  94.0% (234/249)  IGHV4-61*08  49   ..................A.....................G...........A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  T  G  G  A  N  Y  N  P  S  L  K  S  R  V  S  I  S  I  D  T  S 
                    Query_273    91   CTCGAGTGGATTGGATATATCTATTACACTGGGGGCGCCAACTACAACCCCTCCCTCAAGAGTCGAGTCAGCATATCAATAGACACGTCC  180
V  94.0% (234/249)  IGHV4-61*08  139  ..G...........G.............G....A..A.................................C.......G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       E  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  S  F  M  M  V  R 
                    Query_273    181  GAGAATCAGTTCTCCCTGAAGCTGAGTTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGCGAGACTCTCGTTTATGATGGTTCGG  270
V  94.0% (234/249)  IGHV4-61*08  229  A....C....................C..........................G..T............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (14/14)   IGHD3-10*01  9    ---------------------------------------------------------------------------------.........  17

                                      GT------------------>                                  
                                       G  V  L  P  K  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_273    271  GGAGTCCTCCCGAAGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  100.0% (14/14)   IGHD3-10*01  18   .....--------------------------------------------------  22
J  100.0% (40/40)   IGHJ4*02     9    ---------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_231044

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD1-26*01                                                                                           23.8    0.012 
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGTATGCCGTCC	TGGGAGCTACTA	GT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTATGCCGTCCTGGGAGCTACTAGTTGGTTCGACCCC	AKYAVLGATSWFDP	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	268	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  E  P  G  E  S  L  R  I  S  C  R  G  S  G  Y  T  F  I  S  Y
                    Query_274    1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAGAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGCTCTGGGTACACCTTTATTAGTTA  90
V  93.4% (268/287)  IGHV5-51*01  6    ....................C..........A..................A...........A...T.....A....G.....CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  N  P
                    Query_274    91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGAGACCAGATACAACCC  180
V  93.4% (268/287)  IGHV5-51*01  96   C.......G...........................................A......................T..........G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  L  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  S  L  K  A  S  D  T  A
                    Query_274    181  GTCCTTCCAAGGCCACGTCACCCTCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCACTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (268/287)  IGHV5-51*01  186  ...............G......A.....................G...............G.............................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  K  Y  A  V  L  G  A  T  S  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_274    271  CATGTATTACTGTGCGAAGTATGCCGTCCTGGGAGCTACTAGTTGGTTCGACCCCTGGGGCCAGGGAACCCTAGTCATCGTCTCCTCAG  359
V  93.4% (268/287)  IGHV5-51*01  276  .................------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                          
D  100.0% (12/12)   IGHD1-26*01  8    -----------------------------............------------------------------------------------  19
J  95.7% (44/46)    IGHJ5*02     6    -------------------------------------------.............................G....C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_231047

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTTGTGG	TACTCTGGTTCGGGGAGT	AAAACCCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTTGTGGTACTCTGGTTCGGGGAGTAAAACCCATTTTGACTAC	ARGLWYSGSGSKTHFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_275    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .............................................................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_275    91   CTGGAGTGGATTGGGTACATTTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATTTCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ....................C.....................................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  W  Y  S  G  S 
                    Query_275    181  AAGAACCAGTTCTCCCTGAAGCTGCGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGTTTGTGGTACTCTGGTTCG  270
V  98.4% (246/250)  IGHV4-31*03  229  ........................A.............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  5    ------------------------------------------------------------------------------....A.......  16

                                      MGT-------------------->                                  
                                       G  S  K  T  H  F  D  Y  W  G  Q  G  T  L  V  T  I  S  S  
                    Query_275    271  GGGAGTAAAACCCATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCATCTCCTCAG  328
D  94.4% (17/18)    IGHD3-10*01  17   ......----------------------------------------------------  22
J  97.7% (42/43)    IGHJ4*02     6    ---------------.................................G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_231046

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           347     7e-98
IGHD2-2*01                                                                                            31.5    6e-05
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGGGG	TATTGTAGTAGTGCCAACTGATATG	GGGGCAGGGGGCCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGGGGTATTGTAGTAGTGCCAACTGATATGGGGGCAGGGGGCCCATTTGACCAC	ARLRGIVVVPTDMGAGGPFDH	246	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_276    4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  94.8% (235/248)  IGHV4-31*03  50   .....TCC...A..................G...........................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  S  T  S  L  K  S  R  L  T  I  S  V  D  T  S  
                    Query_276    94   TGGAGTGGATTGGGTACATCTATTATAGTGGGAGCACCTACTACAGTACGTCCCTCAAGAGTCGACTTACCATATCGGTAGACACGTCTC  183
V  94.8% (235/248)  IGHV4-31*03  140  .........................C...................ACC.................G..........A............A  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      Q  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  R  G  I  V  V  V  
                    Query_276    184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGACTTCGGGGTATTGTAGTAGTGC  273
V  94.8% (235/248)  IGHV4-31*03  230  ....................................................G...............----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  88.0% (22/25)    IGHD2-2*01   5    ----------------------------------------------------------------------------............A.  18

                                      DR3-IMGT-------------------------->                                  
                                      P  T  D  M  G  A  G  G  P  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_276    274  CAACTGATATGGGGGCAGGGGGCCCATTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
D  88.0% (22/25)    IGHD2-2*01   19   ..G...C....----------------------------------------------------------  29
J  97.7% (42/43)    IGHJ4*02     6    --------------------------......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_231040

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         321     6e-90
IGHD3-10*01                                                                                           10.3    116  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GA	GGGGA	CAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAGGGGACATTATGGACGTC	ARGGDIMDV	246	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	101	13	0	88.6
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_277      4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGCC  93
V  91.2% (227/249)  IGHV4-30-2*01  50   .....TCC...A..............................................................................  139
                                           L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  H  H  S  G  L  S  N  S  N  P  S  L  K  S  R  R  T  T  S  G  D  R  P  
                    Query_277      94   TGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACGCACCACATCAGGAGACAGGCCAA  183
V  91.2% (227/249)  IGHV4-30-2*01  140  .............G......T...........AG..C.T...A......................GT.....T.....T.......T.C.  229
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  

                                        -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                        K  T  Q  L  S  L  R  R  S  S  V  T  A  A  D  T  A  V  Y  Y  W  A  R  G  G  D  I  M  D  V  
                    Query_277      184  AGACCCAGTTGTCCCTGAGGCGGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGGGCCAGAGGAGGGGACATTATGGACGTCT  273
V  91.2% (227/249)  IGHV4-30-2*01  230  ...A......C.......A..T.......................................T.......---------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01    16   -----------------------------------------------------------------------.....--------------  20
J  100.0% (43/43)   IGHJ6*02       20   -------------------------------------------------------------------------------...........  30

                                                                        
                                        W  G  Q  G  T  T  V  T  V  S  S 
                    Query_277      274  GGGGCCAAGGGACCACGGTCACCGTCTCCTCA  305
J  100.0% (43/43)   IGHJ6*02       31   ................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_231043

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD1-1*01                                                                                            14.1    8.2  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTACCCTA	AACTGGGACG	GACCTTCTGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTACCCTAAACTGGGACGGACCTTCTGCTTTTGACCAC	ARLTLNWDGPSAFDH	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  D  P  M  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_278    1    ACCCTGTCCCTCACCTGCGCTGTCTCCGGTGACCCCATGACTAGTTATTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  91.8% (223/243)  IGHV4-59*01  49   ..................A.......T....G.T....C.G......C........C........................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  L  S  I  D  T  S  K  N 
                    Query_278    91   TGGATTGGATATATCTACTACAGTGGGAGCACCAACTACAACCCTTCCCTCAGGAGTCGAGTCACCTTATCGATAGACACGTCCAAGAAC  180
V  91.8% (223/243)  IGHV4-59*01  139  ........G........T..........................C.......A.............A....AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       H  F  S  L  S  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  T  L  N  W  D  G  P  S 
                    Query_278    181  CACTTCTCCCTGAGCCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGACTTACCCTAAACTGGGACGGACCTTCT  270
V  91.8% (223/243)  IGHV4-59*01  229  ..G..........AG................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD1-1*01   6    ------------------------------------------------------------------------......A...--------  15

                                      ----------->                                  
                                       A  F  D  H  W  G  R  G  T  L  V  A  V  S  S  
                    Query_278    271  GCTTTTGACCACTGGGGCCGGGGAACCCTGGTCGCCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---......T.........A.............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_231042

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-3*01                                                                                            29.5    2e-04
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CGAGGGTCC	GTATTACGATTATTGGAG	G	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACGAGGGTCCGTATTACGATTATTGGAGGGATGCTTTTGATATG	AKDEGPYYDYWRDAFDM	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  F  R  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_279    1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTGGATTCACCTTTAGGAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTAG  90
V  94.0% (235/250)  IGHV3-23*01  47   .....................C..C..................C............................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  S  G  T  G  G  T  T  H  Y  A  D  S  V  K  G  R  F  T  I  Y  R  D  N  S  
                    Query_279    91   AGTGGGTCGCAGCAATTAGTGGTACTGGTGGTACCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATTTACAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  ........T....T..........G........G....T..................................C.C..............  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  P  D  D  R  A  V  Y  Y  C  A  K  D  E  G  P  Y  Y  D  
                    Query_279    181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGGCCCGACGACAGGGCCGTATATTACTGTGCGAAAGACGAGGGTCCGTATTACGATT  270
V  94.0% (235/250)  IGHV3-23*01  227  ..................................AG....G....C........................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  94.4% (17/18)    IGHD3-3*01   1    -------------------------------------------------------------------------------...........  11

                                      GT-------------------->                                  
                                      Y  W  R  D  A  F  D  M  W  G  Q  G  T  M  V  S  V  S  S  
                    Query_279    271  ATTGGAGGGATGCTTTTGATATGTGGGGCCAAGGGACAATGGTCAGCGTCTCTTCAG  327
D  94.4% (17/18)    IGHD3-3*01   12   T......--------------------------------------------------  18
J  95.9% (47/49)    IGHJ3*02     2    --------..............C......................C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_231049

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           360     1e-101
IGHD6-13*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTT	TATAACAGCAGTTGG	GTGCTCGA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTTATAACAGCAGTTGGGTGCTCGATGACTTC	ARDFYNSSWVLDDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  I  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_280    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAATCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-21*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  T  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_280    91   AGTGGGTCTCATCCATTAGTAGTAGTACTAGTTACATATATTATGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-21*01  137  ...........................G............C..C..............................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  R  S  L  Y  L  H  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  Y  N  S  S  W  
                    Query_280    181  AGAGATCACTGTATCTGCACATGAACAACCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGATTTTTATAACAGCAGTTGGG  270
V  96.0% (240/250)  IGHV3-21*01  227  ...AC..............A.......G........................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD6-13*01  4    --------------------------------------------------------------------------....G......C...-  18

                                      ------------->                                
                                      V  L  D  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_280    271  TGCTCGATGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  316
J  97.4% (38/39)    IGHJ4*02     8    -------.....A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_231048

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           302     3e-84
IGHD3-3*01                                                                                            14.1    8.1  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TGC	GGAGTGG	ACTTATG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGCGGAGTGGACTTATGGACTCC	ARLRSGLMDS	246	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	14	7	0	66.7
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	221	28	0	88.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  D  S  I  N  I  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  N  G  
                    Query_281    4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCATCAACATTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCGGGGAACGGAC  93
V  88.8% (221/249)  IGHV4-39*01  50   .....TCC...A....C.............G........G..G..G.................................A.....G..G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  L  G  S  V  S  N  S  G  N  T  Y  Y  N  P  S  L  K  R  R  V  T  V  S  V  D  T  S  
                    Query_281    94   TGGAGTGGCTTGGGAGTGTCTCGAACAGTGGTAACACCTACTACAACCCGTCCCTCAAGCGTCGGGTCACCGTATCCGTAGACACGTCCA  183
V  88.8% (221/249)  IGHV4-39*01  140  ........A........A...ATT.T.....G.G.........................A....A......A..................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      N  H  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  R  S  G  L  M  D  
                    Query_281    184  ATCATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTTCTGTGCGAGACTGCGGAGTGGACTTATGGACT  273
V  88.8% (221/249)  IGHV4-39*01  230  .GA.C.............A......................................A...........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-3*01   15   ------------------------------------------------------------------------.......-----------  21
J  97.5% (39/40)    IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                  
                                      S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_281    274  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.5% (39/40)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_278301

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           21.8    0.040
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	C	ATAGAAGTGGCTGG	CCGTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACATAGAAGTGGCTGGCCGTTTGATGCTTTCGAGATC	ARHRSGWPFDAFEI	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  Y  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_282    4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAATTATCACTACTGGAGCTGGATCCGGCAGTCTCCAGGGAAGGGACTGGAGT  93
V  92.1% (223/242)  IGHV4-59*01  50   .....TCC...A...........................G.AG.T.......................C.C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  I  Y  N  P  S  L  E  S  R  V  T  I  S  A  D  T  S  K  K  
                    Query_282    94   GGATTGGCTATATCTATTACAGTGGGAGCACCATCTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAGC  183
V  92.1% (223/242)  IGHV4-59*01  140  .......G.........................A................A.....................T...............C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  S  A  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  R  S  G  W  P  F  D  A  
                    Query_282    184  AGTTCTCCCTGAAGCTGAGCGCTGTAACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGACATAGAAGTGGCTGGCCGTTTGATGCTT  273
V  92.1% (223/242)  IGHV4-59*01  230  ....................T....G....................G............A..----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  92.9% (13/14)    IGHD6-19*01  5    ---------------------------------------------------------------....C.........-------------  18
J  88.0% (44/50)    IGHJ3*02     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  E  I  W  G  Q  G  I  K  V  S  V  S  S  
                    Query_282    274  TCGAGATCTGGGGCCAGGGGATAAAGGTCTCCGTCTCTTCAG  315
J  88.0% (44/50)    IGHJ3*02     9    .T..T...........A....C..T....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_145257

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD1-26*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCGA	TATACTGGGAGCTAC	CGAC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCGATATACTGGGAGCTACCGACATGCTTTTGATATC	ARFRYTGSYRHAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	233	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_283    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTATTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  95.9% (233/243)  IGHV4-59*01  49   ...........................................G...C.A.......................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       Y  I  G  Y  I  S  Y  S  G  S  T  D  Y  N  P  S  L  K  S  G  V  T  I  S  L  D  T  S  K  N 
                    Query_283    91   TATATTGGGTATATCTCTTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTGGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  95.9% (233/243)  IGHV4-59*01  139  .GG.............A................A.......................C..............G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  R  Y  T  G  S  Y  R  H 
                    Query_283    181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATTCCGATATACTGGGAGCTACCGACAT  270
V  95.9% (233/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD1-26*01  3    ---------------------------------------------------------------------....G..........------  17
J  97.8% (44/45)    IGHJ3*02     3    ----------------------------------------------------------------------------------------..  4

                                      ----------->                               
                                       A  F  D  I  W  S  Q  G  T  M  V  T  V  S  
                    Query_283    271  GCTTTTGATATCTGGAGCCAAGGGACAATGGTCACCGTCTCTT  313
J  97.8% (44/45)    IGHJ3*02     5    ...............G...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_145254

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           355     3e-100
IGHD3-16*02                                                                                           46.8    1e-09 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AG	ATTATGATTACGTTTGGGGAAGTTATC	TCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGATTATGATTACGTTTGGGGAAGTTATCTCCACTAC	AREDYDYVWGSYLHY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  F  D  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_284    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCGACAGTACTTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*02  49   ..................................C..T.....G...C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  E  D  T  S  K  N 
                    Query_284    91   TGGATTGGATATATTAATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGAAGACACGTCCAAGAAC  180
V  96.3% (236/245)  IGHV4-59*02  139  ........G.....CT.........................................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  D  Y  D  Y  V  W  G  S 
                    Query_284    181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTACTACTGTGCGAGAGAAGATTATGATTACGTTTGGGGAAGT  270
V  96.3% (236/245)  IGHV4-59*02  229  ..................................................T..............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  96.3% (26/27)    IGHD3-16*02  3    -------------------------------------------------------------------...................G...  25

                                      ----------->                                  
                                       Y  L  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_284    271  TATCTCCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  96.3% (26/27)    IGHD3-16*02  26   ....------------------------------------------  29
J  100.0% (39/39)   IGHJ4*02     10   -------.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_278302

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           305     3e-85
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTGG	AGCAGTGGCTGGT	CGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTGGAGCAGTGGCTGGTCGGTTTGACTTC	AREGGAVAGRFDF	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	223	28	0	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  R  G  P  V  S  S  G  G  Y  H  W  S  W  I  R  Q  T  P  G  R  G 
                    Query_285    1    ACCCTGTCCCTCACCTGCTCTGTCTCTCGTGGCCCCGTCAGCAGTGGGGGTTATCACTGGTCCTGGATCCGGCAGACCCCAGGCAGGGGA  90
V  88.8% (223/251)  IGHV4-61*08  49   ..................A........G.....T.............T.....CT.....AG.............C.......G.A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  F  T  G  T  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  A  D  M  S 
                    Query_285    91   CTGGAGTGGATTGGCTATATCCACTTCACTGGGACCACCAAGTACAACCCCTCCCTTAAGAGTCGAGTCAGCATATCAGCAGACATGTCC  180
V  88.8% (223/251)  IGHV4-61*08  139  ..............G......T.T.A..G.....G......C..............C.............C........T.....C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  A  V  A  G 
                    Query_285    181  AAGAACCAATTCTCCCTGAACCTGAGGTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTGCGAGAGAGGGTGGAGCAGTGGCTGGT  270
V  88.8% (223/251)  IGHV4-61*08  229  ........G...........G.....C..........................G..T..C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD6-19*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------->                                  
                                       R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_285    271  CGGTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02     6    ---.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_145252

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           374     7e-106
IGHD3-3*01                                                                                            14.1    8.3   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	242	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_286    1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (242/245)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_286    91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.8% (242/245)  IGHV4-34*01  139  .........................................................................T................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_286    181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  98.8% (242/245)  IGHV4-34*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_286    271  GCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_145253

Length=316
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           372     2e-105
IGHD7-27*01                                                                                           12.2    29    
IGHJ1*01                                                                                              46.8    2e-09 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD7-27*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CC	CTGGGG	N/A	GCACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCTGGGGGCAC	ARPWGH	243	260	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	243	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_287    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (243/248)  IGHV3-11*01  47   .................................................C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  S  G  S  T  K  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_287    91   AGTGGGTTTCATACATTAGTACTAGTGGTAGTACCAAACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  98.0% (243/248)  IGHV3-11*01  137  .....................G..............T.T...................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----CDR3-IMGT--->          
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  W  G  H  W  G  P  
                    Query_287    181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGACCCTGGGGGCACTGGGGCCCGG  270
V  98.0% (243/248)  IGHV3-11*01  227  ..........................................................C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD7-27*01  5    ----------------------------------------------------------------------......--------------  10
J  88.9% (32/36)    IGHJ1*01     15   ----------------------------------------------------------------------------...........A..  28

                                                            
                                      G  A  L  V  T  V  P  S
                    Query_287    271  GCGCCCTGGTCACTGTCCCCTC  292
J  88.9% (32/36)    IGHJ1*01     29   ..A..........C...T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30515799


Query= Query_145250

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           339     2e-95
IGHD3-16*01                                                                                           14.1    8.1  
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCC	TTTGGGG	TA	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCTTTGGGGTAAACTGGTTCGACCCC	ARAFGVNWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  D  Y  M  G  W  I  R  Q  A  P  G  K  G  L  
                    Query_288    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACGACTACATGGGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-11*01  47   ...............................................T........A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  G  Y  T  G  T  T  I  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_288    91   AGTGGCTTTCATATATTGGTTATACTGGAACTACCATATATTATGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  93.9% (232/247)  IGHV3-11*01  137  .....G.......C...A..AG..G...T.G.........C..C...........................A..................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  F  G  V  N  W  F  
                    Query_288    181  AGAACTCACTGTTTCTGCAAATGAACAGCCTCAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGGGCCTTTGGGGTAAACTGGTTCG  270
V  93.9% (232/247)  IGHV3-11*01  227  ............A..................G...................................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  15   -----------------------------------------------------------------------.......------------  21
J  100.0% (49/49)   IGHJ5*02     3    --------------------------------------------------------------------------------..........  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_288    271  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (49/49)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_305349

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTTGTGG	TACTCTGGTTCGGGGAGT	AAAACCCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTTGTGGTACTCTGGTTCGGGGAGTAAAACCCATTTTGACTAC	ARGLWYSGSGSKTHFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_289    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .............................................................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_289    91   CTGGAGTGGATTGGGTACATTTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATTTCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ....................C.....................................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  W  Y  S  G  S 
                    Query_289    181  AAGAACCAGTTCTCCCTGAAGCTGCGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGTTTGTGGTACTCTGGTTCG  270
V  98.4% (246/250)  IGHV4-31*03  229  ........................A.............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  5    ------------------------------------------------------------------------------....A.......  16

                                      MGT-------------------->                                  
                                       G  S  K  T  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_289    271  GGGAGTAAAACCCATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  94.4% (17/18)    IGHD3-10*01  17   ......----------------------------------------------------  22
J  100.0% (43/43)   IGHJ4*02     6    ---------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_305346

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            307     1e-85
IGHD3-10*01                                                                                           12.2    31   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TTAAGGGAAGTA	GTTCGTCGACTTATT	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTAAGGGAAGTAGTTCGTCGACTTATTACTGGTTCGACCCC	VKGSSSSTYYWFDP	236	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	22	20	18	2	0	90
CDR1-IMGT	23	49	27	24	3	0	88.9
FR2-IMGT	50	100	51	45	6	0	88.2
CDR2-IMGT	101	121	21	20	1	0	95.2
FR3-IMGT	122	235	114	107	7	0	93.9
CDR3-IMGT (germline)	236	236	1	1	0	0	100
Total	N/A	N/A	234	215	19	0	91.9


Alignments

                                      <-----FR1-IMGT-----><--------CDR1-IMGT--------><--------------------FR2-IMGT--------------
                                         L  T  C  L  V  S  G  G  S  I  T  S  S  N  W  R  S  W  V  R  Q  P  P  G  K  G  L  E  *  
                    Query_290    3    CCCTCACCTGCCTTGTCTCTGGTGGGTCCATTACCAGTAGTAACTGGAGGTCTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGAA  92
V  91.9% (215/234)  IGHV4-4*02   56   ...........GC............C.....C.G.............T..AG....................................G.  145
                                         L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L  E  W  

                                      -------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IMGT
                                      I  A  D  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  K  N  Q  
                    Query_290    93   TTGCGGATATCTATTATAGTGGGAGCACCAATTACAACCCGTCCCTGAAGAGTCGAGTCACCATCTCATTAGACAAGTCCAAGAACCAGT  182
V  91.9% (215/234)  IGHV4-4*02   146  ...G...A......C................C..............C.................A...G.....................  235
                                      I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N  Q  

                                      ----------------------------------------------------><----------------CDR3-IMGT-----------
                                      F  T  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  K  G  S  S  S  S  T  Y  Y  W  F  
                    Query_290    183  TCACCCTGAAACTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGTTAAGGGAAGTAGTTCGTCGACTTATTACTGGTTCG  272
V  91.9% (215/234)  IGHV4-4*02   236  ..T.......G......................................C....------------------------------------  289
                                      F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                                      
D  80.0% (12/15)    IGHD3-10*01  12   ------------------------------------------------------------------.....GG..G.....---------  26
J  95.8% (46/48)    IGHJ5*02     4    ---------------------------------------------------------------------------------.........  12

                                      ---->                                  
                                      D  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_290    273  ACCCCTGGGGCCGGGGAACCCTGGTCACTGTCTCCTCAG  311
J  95.8% (46/48)    IGHJ5*02     13   ............A...............C..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_305347

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           338     5e-95
IGHD6-13*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGATGGGGG	AGCAGCAGCTGGT	CTGCCCCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATCGATGGGGGAGCAGCAGCTGGTCTGCCCCTCACTTTGACTGC	TRDRWGSSSWSAPHFDC	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	22	8	0	73.3
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	236	20	0	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  I  A  S  G  F  N  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_291    1    GGTCCCTGAGACTCTCCTGTATAGCTTCTGGATTCAACTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.2% (236/256)  IGHV3-49*04  47   .....................C..............C.....................................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  V  R  S  Y  T  H  G  G  T  T  A  Y  A  A  A  V  K  G  R  F  T  I  S  R  D  
                    Query_291    91   AGTGGGTTGGCTTCGTGAGAAGTTATACCCATGGTGGGACAACAGCTTACGCCGCGGCTGTGAAAGGCAGATTCACCATCTCAAGGGATG  180
V  92.2% (236/256)  IGHV3-49*04  137  .......A..T...A.T.....CA.AG.TT...............AA.........T............................A....  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  T  S  I  A  Y  L  E  M  D  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  D  R  W  G  S  
                    Query_291    181  ATTCCACAAGCATCGCCTATCTGGAAATGGACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGCACTAGAGATCGATGGGGGAGCA  270
V  92.2% (236/256)  IGHV3-49*04  227  ......A................C.....A.....................................T........--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (13/13)   IGHD6-13*01  7    --------------------------------------------------------------------------------------....  10

                                      DR3-IMGT-------------------->                                  
                                      S  S  W  S  A  P  H  F  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_291    271  GCAGCTGGTCTGCCCCTCACTTTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD6-13*01  11   .........------------------------------------------------------  19
J  97.8% (44/45)    IGHJ4*02     4    ------------------.........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_305344

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD3-10*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGCGA	CCGCGGTACGACCAGG	ATGTTCG	AGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGACCGCGGTACGACCAGGATGTTCGAGAATGCTCTTGAGATC	AGDRGTTRMFENALEI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	45	6	0	88.2
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	98	16	0	86
CDR3-IMGT (germline)	241	248	8	6	2	0	75
Total	N/A	N/A	248	215	33	0	86.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  G  V  S  G  G  A  I  S  S  S  H  W  W  N  W  V  R  Q  A  P  G  K  G  L 
                    Query_292    1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGCGGCGCCATTAGCAGCAGTCACTGGTGGAATTGGGTCCGCCAGGCCCCCGGAAAGGGACTG  90
V  86.7% (215/248)  IGHV4-4*01   49   ...................C.........T...T....C.....T...A.........G.............C....A..G.....G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  Q  I  Y  P  G  G  S  A  N  Y  N  P  S  L  R  S  R  V  A  I  S  L  D  A  S  K 
                    Query_292    91   GAGTGGATTGGGCAAATCTATCCTGGTGGGAGCGCCAACTACAATCCGTCCCTCAGGAGTCGAGTCGCCATTTCGTTAGACGCGTCCAAG  180
V  86.7% (215/248)  IGHV4-4*01   139  ............G.........A.A........A..........C..........A..........A....A..AG.....AA.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       S  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  G  D  R  G  T  T  R  M  F 
                    Query_292    181  AGCCAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCTGACACGGCCGTCTATTTTTGTGCGGGCGACCGCGGTACGACCAGGATGTTC  270
V  86.7% (215/248)  IGHV4-4*01   229  .A..............A.C...G...............G...........G....GC......A.A..----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (7/7)     IGHD3-10*02  9    ------------------------------------------------------------------------------------......  14

                                      ----------------->                                  
                                       E  N  A  L  E  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_292    271  GAGAATGCTCTTGAGATCTGGGGTCAAGGGACAATGGTCACCGTTTCCTCAG  322
D  100.0% (7/7)     IGHD3-10*02  15   .---------------------------------------------------  15
J  89.6% (43/48)    IGHJ3*02     3    ----.....T....T........C....................C..T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_305345

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           315     5e-88
IGHD5-12*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATTACATCGAGA	TGGCTAC	AATAGAGGAGTT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATTACATCGAGATGGCTACAATAGAGGAGTTTTTGCCTTC	ARELHRDGYNRGVFAF	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	224	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  R  T  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_293    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGGACCAATTACATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  90.7% (224/247)  IGHV3-53*01  47   ...........................................T.G...C........C..............................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      Q  W  V  S  L  I  H  S  G  G  T  S  S  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  K  S  T  
                    Query_293    91   AGTGGGTCTCACTTATTCATAGTGGTGGGACCTCGTCCTATTCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAAGTCCACTA  180
V  90.7% (224/247)  IGHV3-53*01  137  ...........G.....T....C.....T.G.A.A.A...CG........................................T....AG.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  V  Y  L  Q  M  V  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  L  H  R  D  G  Y  N  
                    Query_293    181  ACACGGTATATCTTCAAATGGTCAACCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGAATTACATCGAGATGGCTACAATA  270
V  90.7% (224/247)  IGHV3-53*01  227  .....C.G............AA..G..........................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD5-12*01  11   -------------------------------------------------------------------------------.......----  17

                                      ---------------->                                  
                                      R  G  V  F  A  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_293    271  GAGGAGTTTTTGCCTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  321
J  93.0% (40/43)    IGHJ4*02     6    --------....A..A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_305342

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           453     1e-129
IGHD6-13*01                                                                                           35.3    4e-06 
IGHJ3*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-13*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGGGAAA	GTATAGCAGCAGCTGGTA	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGGGAAAGTATAGCAGCAGCTGGTATGATGCTTTTGATATC	ARDLGKYSSSWYDAFDI	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	290	0	0	100


Alignments

                                       <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                     Query_294    2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTAT  91
V  100.0% (290/290)  IGHV1-18*01  7    ..........................................................................................  96
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                       --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                        G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 
                     Query_294    92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAG  181
V  100.0% (290/290)  IGHV1-18*01  97   ..........................................................................................  186
                                        G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                       -----------------------------------------FR3-IMGT-----------------------------------------
                                        K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                     Query_294    182  AAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  100.0% (290/290)  IGHV1-18*01  187  ..........................................................................................  276
                                        K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                       -----------><--------------------CDR3-IMGT-------------------->                           
                                        V  Y  Y  C  A  R  D  L  G  K  Y  S  S  S  W  Y  D  A  F  D  I  W  G  Q  G  T  M  V  T  V 
                     Query_294    272  GTGTATTACTGTGCGAGAGATCTGGGAAAGTATAGCAGCAGCTGGTATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTC  361
V  100.0% (290/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                         
D  100.0% (18/18)    IGHD6-13*01  3    -----------------------------..................-------------------------------------------  20
J  100.0% (50/50)    IGHJ3*02     1    -----------------------------------------------...........................................  43

                                              
                                        S  S  
                     Query_294    362  TCTTCAG  368
J  100.0% (50/50)    IGHJ3*02     44   .......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_305343

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           330     1e-92
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGTCGTC	ATTACGATTTTTGGAGTGGTT	TTGACGCCACGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGTCGTCATTACGATTTTTGGAGTGGTTTTGACGCCACGTACTACTTTGACTTC	ARGRHYDFWSGFDATYYFDF	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	226	15	0	93.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  H  F  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_295    4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAGTCACTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.8% (226/241)  IGHV4-59*08  50   .....TCC...A................................T...A.........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  D  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S  
                    Query_295    94   GGATTGGGTATATCGACTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAGAGCC  183
V  93.8% (226/241)  IGHV4-59*08  140  ..............T.T...............A..................................A...................A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      H  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  H  Y  D  F  W  S  G  
                    Query_295    184  ACTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTTTATTACTGTGCGAGGGGTCGTCATTACGATTTTTGGAGTGGTT  273
V  93.8% (226/241)  IGHV4-59*08  230  .G...........G....G...........................G..............-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (21/21)   IGHD3-3*01   3    ---------------------------------------------------------------------.....................  23

                                      T------------------------>                                  
                                      F  D  A  T  Y  Y  F  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_295    274  TTGACGCCACGTACTACTTTGACTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  333
J  95.8% (46/48)    IGHJ4*02     1    ------------............A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_305340

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           286     1e-79
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GATAG	N/A	N/A	GTGCGGGATGGCAACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGATAGGTGCGGGATGGCAACCTGACTAC	VIGAGWQPDY	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	246	7	5	2	0	71.4
Total	N/A	N/A	243	213	30	0	87.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  L  S  G  Y  Y  L  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_296    4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCCTGAGTGGTTATTATTTGAACTGGATCCGACAGCCCCCAGGGAAGGGACTGGAGT  93
V  87.7% (213/243)  IGHV4-59*01  50   .....TCC...A.......................A.C...A....C..C.G..G.........G.........................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  L  I  S  Y  T  G  S  T  N  Y  N  P  S  L  Q  S  R  V  I  I  S  V  D  T  S  K  N  
                    Query_296    94   GGCTTGGTTTAATCTCTTACACCGGGAGTACCAACTACAACCCCTCCCTCCAGAGTCGAGTCATCATATCGGTAGACACGTCCAAGAACC  183
V  87.7% (213/243)  IGHV4-59*01  140  ..A....G.AT....A.....GT.....C.....................A............C......A...................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------CDR3-IMGT--------->    
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  V  I  G  A  G  W  Q  P  D  Y  W  
                    Query_296    184  AGTTCTCCCTGAGGTTGAGCTCTGTGACCGCTGCGGACACGGCCCTATATTATTGTGTGATAGGTGCGGGATGGCAACCTGACTACTGGG  273
V  87.7% (213/243)  IGHV4-59*01  230  ............A.C.............................G.G.....C....C..G..---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  95.1% (39/41)    IGHJ4*02     8    -------------------------------------------------------------------------------...........  18

                                                                    
                                      G  P  G  T  L  V  T  V  S  S  
                    Query_296    274  GCCCGGGAACGCTGGTCACCGTCTCCTCAG  303
J  95.1% (39/41)    IGHJ4*02     19   ...A......C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_305341

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           315     5e-88
IGHJ6*02                                                                                              108     8e-28


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	N/A	N/A	TAAACTTCCGCCCGGATCCTCCCTCCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAACTTCCGCCCGGATCCTCCCTCCCACTACTACTACGGTATGGACGTC	VNFRPDPPSHYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  G  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_297    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCCATGGCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.4% (222/243)  IGHV3-23*01  47   ...........................................C...T...C.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  A  T  G  G  R  K  F  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_297    91   AGTGGGTCTCGAGTATAAGCGCCACTGGTGGCAGAAAGTTCTACGCAGACTCTGTGAAGGGCCGGCTCACCATCTCCAGAGACAATTCCA  180
V  91.4% (222/243)  IGHV3-23*01  137  ..........AGC...T..T.GT.G......T..C.CA.A............C............T........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  H  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  N  F  R  P  D  P  P  S  
                    Query_297    181  AGAACACGCTGCATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGTAAACTTCCGCCCGGATCCTCCCTCCC  270
V  91.4% (222/243)  IGHV3-23*01  227  ...........T............................G......................---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             

                                      GT-------------------->                                 
                                      H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_297    271  ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (56/56)   IGHJ6*02     7    ........................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_113957

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         360     1e-101
IGHD3-10*01                                                                                           10.3    114   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GA	GGGGA	CAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAGGGGACATTATGGACGTC	ARGGDIMDV	244	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_298      1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  H  S  G  L  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  R  S 
                    Query_298      91   CTGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACAGGTCC  180
V  96.0% (240/250)  IGHV4-30-2*01  139  ..............G......T...........AG..C.T...A......................G.......................  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                         K  N  Q  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  D  I  M  D  V 
                    Query_298      181  AAGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAGGGGACATTATGGACGTC  270
V  96.0% (240/250)  IGHV4-30-2*01  229  ...........C.......A..................................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01    16   ------------------------------------------------------------------------.....-------------  20
J  100.0% (43/43)   IGHJ6*02       20   --------------------------------------------------------------------------------..........  29

                                                                         
                                         W  G  Q  G  T  T  V  T  V  S  S 
                    Query_298      271  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  303
J  100.0% (43/43)   IGHJ6*02       30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_113954

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            349     2e-98
IGHD3-16*01                                                                                           14.1    7.8  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCC	GTATTAT	CGC	ATCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCCCGTATTATCGCATC	TRGPYYRI	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	4	3	0	57.1
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_299    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATACCTTGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  94.8% (236/249)  IGHV3-9*01   47   ..................................................G..A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  S  W  N  G  G  L  K  V  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_299    91   AGTGGGTCGCAGGTATTAGTTGGAATGGTGGTCTCAAGGTCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (236/249)  IGHV3-9*01   137  ........T.................A.....AG..TA.G..................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  G  P  Y  Y  R  I  W  
                    Query_299    181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCGTGTATTACTGTACGAGAGGCCCGTATTATCGCATCTGGG  270
V  94.8% (236/249)  IGHV3-9*01   227  ..................................................T...........G.A.A..---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-16*01  1    -------------------------------------------------------------------------.......----------  7
J  100.0% (36/36)   IGHJ3*02     14   -----------------------------------------------------------------------------------.......  20

                                                                   
                                      G  Q  G  T  M  V  T  V  S  S 
                    Query_299    271  GCCAAGGGACAATGGTCACCGTCTCTTCA  299
J  100.0% (36/36)   IGHJ3*02     21   .............................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_113955

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD4-17*01                                                                                           16.1    2.5   
IGHJ1*01                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD4-17*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGG	ACGGTGAC	GCTCTTTTGCGAGA	TGAAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGACGGTGACGCTCTTTTGCGAGATGAATACTTCCAACAC	ARRDGDALLRDEYFQH	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  A  Y  S  F  T  N  Y
                    Query_300    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCTTGTAAAGGTTCTGCATACAGCTTTACCAACTA  90
V  93.1% (270/290)  IGHV5-51*01  6    .........................................................C.....G.......G..............G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  G  D  S  D  A  R  Y  S  P
                    Query_300    91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAGGGCCTGGAGTGGATGGGCATCATCTTTCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  93.1% (270/290)  IGHV5-51*01  96   ........G........................A.................G.......A................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  I  T  L  S  A  D  K  S  V  S  T  V  Y  L  Q  W  R  S  L  R  P  P  D  T  A
                    Query_300    181  GTCCTTCCAAGGCCACATCACCCTCTCAGCCGACAAGTCCGTCAGCACCGTCTACCTGCAGTGGAGGAGCCTGAGGCCCCCCGACACCGC  270
V  93.1% (270/290)  IGHV5-51*01  186  ...............GG.....A.................A.........C...............C.......A.G..T.G........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        I  Y  Y  C  A  R  R  D  G  D  A  L  L  R  D  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S
                    Query_300    271  CATATATTACTGTGCGAGACGGGACGGTGACGCTCTTTTGCGAGATGAATACTTCCAACACTGGGGCCAGGGAACCCTGGTCACCGTCTC  360
V  93.1% (270/290)  IGHV5-51*01  276  ...G................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD4-17*01  6    -----------------------........-----------------------------------------------------------  13
J  96.0% (48/50)    IGHJ1*01     3    ---------------------------------------------............G..............C.................  47

                                           
                                        S  
                    Query_300    361  CTCAG  365
J  96.0% (48/50)    IGHJ1*01     48   .....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_113952

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           344     6e-97
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGCG	GGCTGG	G	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCTGGGAACTGGTTCGACCCC	ARGRRAGNWFDP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_301    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTGGGGCTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.0% (235/250)  IGHV4-31*03  49   .........................................C.....T.G............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  E  N  T  Q  Y  N  P  S  L  K  S  R  L  T  I  S  G  D  T  S 
                    Query_301    91   CTGGAGTGGATTGGATACATCTATTACGGTGAGAACACCCAGTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGGAGACACGTCT  180
V  94.0% (235/250)  IGHV4-31*03  139  ..............G............A...G..G....T.C........................G............T..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       T  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  W 
                    Query_301    181  ACGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCTGGGAACTGG  270
V  94.0% (235/250)  IGHV4-31*03  229  .A.................A.................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------......-------  18
J  98.0% (48/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  T  S  
                    Query_301    271  TTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCACCTCAG  313
J  98.0% (48/49)    IGHJ5*02     9    ....................................T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_113953

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           338     5e-95
IGHD4-17*01                                                                                           12.2    32   
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGAAGAAAG	TACGGT	CA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATGGGAAGAAAGTACGGTCAGATGCTTTTGATATA	VRDGKKVRSDAFDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  G  S  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_302    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTGGTTCCTGGATGCACTGGGTCCGCCAAGCTCCTGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-74*01  47   ...................................A........A.C.A...........................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  G  D  G  S  G  T  N  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_302    91   TGTGGGTCTCACGTATTAATGGTGATGGGAGTGGCACAAACTACGCGGAATCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCC  180
V  93.2% (233/250)  IGHV3-74*01  137  ....................A...........A......G.........C.......................................A  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      Q  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  A  Y  Y  C  V  R  D  G  K  K  V  R  S  
                    Query_302    181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGATGACACGGCTGCATACTACTGTGTCAGAGATGGGAAGAAAGTACGGTCAG  270
V  93.2% (233/250)  IGHV3-74*01  227  .......G................................G..........TG..T.......CA.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD4-17*01  5    ---------------------------------------------------------------------------------......---  10
J  97.9% (46/47)    IGHJ3*02     2    -----------------------------------------------------------------------------------------.  2

                                      ------------->                                
                                      D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S
                    Query_302    271  ATGCTTTTGATATATGGGGCCAAGGGACAATGGTCACCGTCTCTTC  316
J  97.9% (46/47)    IGHJ3*02     3    .............C................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_113950

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         339     2e-95
IGHD5-18*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGCGGTA	GATACACCTATGG	GATTTATGTACTTCC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCGGTAGATACACCTATGGGATTTATGTACTTCCTTGATTAC	ARGAVDTPMGFMYFLDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  E  A  S  G  F  S  F  S  T  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_303      1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCAGTTTCAGTACTTATTCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-30-3*01  47   .....................C..............CC.......GC...G.......................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  A  Y  D  G  S  N  K  Y  Y  G  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_303      91   AGTGGGTGGCAGTTATAGCATATGATGGAAGCAATAAATATTATGGAGACTCCGTAAAGGGCCGATTCTCCATCTCCAGAGACAATTCCA  180
V  93.6% (233/249)  IGHV3-30-3*01  137  .................T......................C..C.C.........G............A.....................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                        K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  A  V  D  T  P  M  
                    Query_303      181  AGAACACATTGTTTCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTCTATTACTGTGCGAGAGGGGCGGTAGATACACCTATGG  270
V  93.6% (233/249)  IGHV3-30-3*01  227  .......GC...A.......................................G................---------------------  295
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD5-18*01    4    -----------------------------------------------------------------------------......G......  16

                                        GT-------------------->                                  
                                        G  F  M  Y  F  L  D  Y  W  G  Q  G  T  L  A  T  V  S  A  
                    Query_303      271  GATTTATGTACTTCCTTGATTACTGGGGCCAGGGAACCCTGGCCACCGTCTCCGCAG  327
J  92.9% (39/42)    IGHJ4*02       7    ---------------....C......................T..........T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_113951

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           296     2e-82
IGHD4-4*01                                                                                            19.9    0.15 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATCAGC	CAGTAACTAC	TCTCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCAGCCAGTAACTACTCTCGGCTAC	ARNQPVTTLGY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	245	217	28	0	88.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  P  G  F  S  F  S  A  Y  N  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_304    1    GGTCCCTGAGACTCTCCTGTGCAGCCCCTGGATTCAGCTTCAGTGCCTATAACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  88.6% (217/245)  IGHV3-53*01  47   ..........................T....G....C.G.....AG.A.CT......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  L  S  V  M  Y  S  R  G  A  T  R  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  S  S  K  
                    Query_304    91   AGTGGCTCTCAGTCATGTATAGTCGTGGAGCCACAAGGTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  88.6% (217/245)  IGHV3-53*01  137  .....G.......T..T.....CG....TAG....TAC................A..........................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      N  T  V  Y  L  Q  M  K  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  N  Q  P  V  T  T  L  G  
                    Query_304    181  ACACGGTGTATCTTCAAATGAAAAACCTGAGAGTCGAGGACACGGCCGTCTATTACTGTGCGAGAAATCAGCCAGTAACTACTCTCGGCT  270
V  88.6% (217/245)  IGHV3-53*01  227  .....C................C.G........C...............G...............-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (10/10)   IGHD4-4*01   7    ------------------------------------------------------------------------..........--------  16
J  97.4% (37/38)    IGHJ4*02     11   ----------------------------------------------------------------------------------------..  12

                                      ->                                  
                                      Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_304    271  ACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.4% (37/38)    IGHJ4*02     13   .........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_6834

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            321     6e-90
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GAGCAG	GCAGTGGCT	CAAC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGAGCAGGCAGTGGCTCAACCTTTGCCTAC	ATGAGSGSTFAY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  E  F  V  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_305    1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGAATTCGTCTTCAGTTCCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.2% (227/249)  IGHV3-7*01   47   .....................C........G....AC...T...AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_305    91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAACACTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACCCCA  180
V  91.2% (227/249)  IGHV3-7*01   137  ......................................T......T........................................G...  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  T  S  L  Y  L  Q  M  N  F  L  R  G  D  D  S  A  V  Y  Y  C  A  T  G  A  G  S  G  S  T  
                    Query_305    181  AGACTTCACTATATCTGCAAATGAATTTCCTGAGAGGTGACGACTCGGCTGTGTACTACTGTGCGACAGGAGCAGGCAGTGGCTCAACCT  270
V  91.2% (227/249)  IGHV3-7*01   227  ...AC.....G..............CAG........CC..G...A..........T..........G..---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-19*01  8    ---------------------------------------------------------------------------.........------  16
J  93.2% (41/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  A  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_305    271  TTGCCTACTGGGGCCGGGGAACTCTGGTCACCGTCTCCTCAG  312
J  93.2% (41/44)    IGHJ4*02     7    ...A...........A......C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_90875

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           318     6e-89
IGHD7-27*01                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCG	TGGGGA	AAGAGTACGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGTGGGGAAAGAGTACGCGTTTGACTCC	ARVVGKEYAFDS	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  F  S  G  S  S  Y  Y  W  G  W  I  R  Q  S  P  G  K  G  
                    Query_306    4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCTTCAGCGGTAGTTCTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGAC  93
V  90.8% (226/249)  IGHV4-39*02  50   .....TCC...A....C..................A.....A.....AG.........................C.............G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  V  S  V  Y  V  G  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_306    94   TGGAGTGGATTGTCAGTGTCTATGTCGGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCCA  183
V  90.8% (226/249)  IGHV4-39*02  140  ............GG...A.....TATA....................................................A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  H  F  S  L  R  L  R  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  V  V  G  K  E  Y  A  
                    Query_306    184  AGAACCACTTCTCCCTGAGGCTGCGCTCTGTGACCGCCGCAGACACGGCTATTTATTACTGTGCGAGAGTCGTGGGGAAAGAGTACGCGT  273
V  90.8% (226/249)  IGHV4-39*02  230  ..................A....A..........................G.G................---------------------  298
                                      K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD7-27*01  6    ------------------------------------------------------------------------......------------  11
J  97.7% (42/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                  
                                      F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_306    274  TTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (42/43)    IGHJ4*02     7    ......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_231159

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD3-3*01                                                                                            12.2    31   
IGHJ3*01                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCT	TTACGA	GGGGCTAACTTTTCCTT	TCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCTTTACGAGGGGCTAACTTTTCCTTTC	ARDLYEGLTFPF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_307    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTTCTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  91.0% (223/245)  IGHV4-59*01  49   ..........................................AG.....A........................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  N  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  N  S 
                    Query_307    91   TGGCTAGGATATATCAATTACACTGGGAGTACCAACTACAATCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAACAGC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A.T..G......T......G......C...........C..................G.........................G.A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  E  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  Y  E  G  L  T  F  P 
                    Query_307    181  CAATTCTCCCTGGAGTTGTCTTCTGTGACCGCTGCGGACACGGCCGTGTACTATTGTGCGAGAGACCTTTACGAGGGGCTAACTTTTCCT  270
V  91.0% (223/245)  IGHV4-59*01  229  ..G.........A..C..AGC.............................T..C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-3*01   4    --------------------------------------------------------------------......----------------  9

                                      -->                                  
                                       F  W  G  P  G  T  M  V  T  V  S  S  
                    Query_307    271  TTCTGGGGCCCAGGGACAATGGTCACCGTCTCCTCAG  307
J  94.4% (34/36)    IGHJ3*01     15   -.........A.....................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_284241

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*03                                                                                           305     3e-85
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	GGGG	GCACTGGCTGG	CTGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGGGGCACTGGCTGGCTGAATGACTTC	AGGTGWLNDF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	220	25	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  T  S  R  F  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_308    1    GGTCCCTGAGACTCTCCTGTGCAGTGTCTGGGTTCACCACCAGTCGTTTCTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGTCTGG  90
V  89.8% (220/245)  IGHV3-74*03  47   ........................CC.....A......TT....A.C.A....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  L  I  L  S  D  G  S  D  A  T  Y  A  D  S  V  K  G  R  F  T  I  S  I  D  N  A  
                    Query_308    91   TGTGGGTCTCACTTATTCTGAGTGATGGGAGTGACGCAACGTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCATCGACAACGCCA  180
V  89.8% (220/245)  IGHV3-74*03  137  ............G....AAT............AG.A..........................................GA..........  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  V  F  L  Q  M  D  S  L  R  D  E  D  T  A  V  Y  Y  C  A  G  G  T  G  W  L  N  D  
                    Query_308    181  AGAACACGGTCTTTCTGCAAATGGACAGTCTGAGAGACGAGGACACGGCTGTTTATTATTGTGCAGGGGGCACTGGCTGGCTGAATGACT  270
V  89.8% (220/245)  IGHV3-74*03  227  ........C.G.A..........A............C...............G.....C......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.9% (10/11)    IGHD6-19*01  8    ---------------------------------------------------------------------...G.......----------  18
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_308    271  TCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_347108

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           296     2e-82
IGHD2-21*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCCCAT	TTGTGGTGGTGAGTGCTA	CACCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCCCATTTGTGGTGGTGAGTGCTACACCCTTGACTAC	ARPICGGECYTLDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	96	18	0	84.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	218	29	0	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  D  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_309    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCATCTTCAGTGACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  88.3% (218/247)  IGHV3-30*03  47   ............................T.......C.......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  G  V  I  S  Y  D  G  R  N  K  Q  Y  A  D  S  V  R  G  R  F  G  F  S  R  D  N  S  
                    Query_309    91   AGTGGCTGGGAGTCATCTCATATGACGGGAGAAATAAACAATATGCGGACTCCGTGAGGGGCCGATTCGGCTTCTCCAGAGATAATTCTA  180
V  88.3% (218/247)  IGHV3-30*03  137  .....G...C...T..A........T..A..T......T.C.....A..........A..........AC.A..........C.....C.  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  N  I  L  Y  L  Q  L  N  S  L  T  T  E  D  T  A  V  Y  Y  C  A  R  P  I  C  G  G  E  C  
                    Query_309    181  GGAACATTCTGTATCTGCAACTAAACAGCCTGACAACTGAGGACACGGCCGTATATTACTGTGCGAGGCCCATTTGTGGTGGTGAGTGCT  270
V  88.3% (218/247)  IGHV3-30*03  227  A.....CG............A.G..........G.G.............T..G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.4% (17/18)    IGHD2-21*01  7    -------------------------------------------------------------------------............T....  23

                                      ------------->                                  
                                      Y  T  L  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_309    271  ACACCCTTGACTACTGGGGCCAGGGAACTCTGGTCATCGTCTCCTCAG  318
D  94.4% (17/18)    IGHD2-21*01  24   .-----------------------------------------------  24
J  95.2% (40/42)    IGHJ4*02     7    ------......................C.......C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_245780

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           10.3    132   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_310    2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  95.2% (276/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  F  A  Q 
                    Query_310    92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTTTGCACAG  181
V  95.2% (276/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_310    182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_310    272  ATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  95.2% (276/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_347107

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGCCTCGTGCCTG	GGAGTGGTTAT	GAAGCCATACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGCCTCGTGCCTGGGAGTGGTTATGAAGCCATACCTGACTAC	AKSLVPGSGYEAIPDY	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	23	1	0	95.8
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	125	24	22	2	0	91.7
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	231	221	10	0	95.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  L  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 
                    Query_311    15   TGTGCAGCCTCTGGATTCACCCTTAGCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAATGGGTCTCAGGTATT  104
V  95.7% (221/231)  IGHV3-23*01  64   .....................T..................G.................................G..........C....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  S  G  G  D  T  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  S  K  S  T  L  Y  L 
                    Query_311    105  AGTGGTAGTGGTGGTGACACATACTACGCAGACGCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAGCACGCTGTATCTG  194
V  95.7% (221/231)  IGHV3-23*01  154  ...............AG................T..........................................A.............  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       Q  M  N  S  L  R  G  E  D  T  A  V  Y  F  C  A  K  S  L  V  P  G  S  G  Y  E  A  I  P  D 
                    Query_311    195  CAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTATATTTCTGTGCGAAAAGCCTCGTGCCTGGGAGTGGTTATGAAGCCATACCTGAC  284
V  95.7% (221/231)  IGHV3-23*01  244  ...................C....................A..........---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (11/11)   IGHD3-3*01   15   ----------------------------------------------------------------...........---------------  25
J  100.0% (39/39)   IGHJ4*02     8    --------------------------------------------------------------------------------------....  11

                                      -->                                
                                       Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_311    285  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
J  100.0% (39/39)   IGHJ4*02     12   ...................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_347105

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           344     6e-97
IGHD3-9*01                                                                                            14.1    8.1  
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTTTGAC	CACGGCTTAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTGACCACGGCTTATACTACTTTGACTAC	ARDFDHGLYYFDY	237	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	111	3	0	97.4
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	232	226	6	0	97.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  N  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_312    13   GTGCAGCGTCTGGATTCACCTTCAGTAGCAATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTAGCAGTTATAT  102
V  97.4% (226/232)  IGHV3-33*01  65   .............................T.................................................G..........  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      W  Y  D  G  S  D  K  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  K  N  T  L  F  L  
                    Query_312    103  GGTATGATGGAAGTGATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCAAGAACACGCTGTTTCTGC  192
V  97.4% (226/232)  IGHV3-33*01  155  ..............A......................................A..............................A.....  244
                                      W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------CDR3-IMGT-------------->       
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  D  H  G  L  Y  Y  F  D  Y  W  G  
                    Query_312    193  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGATTTTGACCACGGCTTATACTACTTTGACTACTGGGGCC  282
V  97.4% (226/232)  IGHV3-33*01  245  ..................................G.................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (7/7)     IGHD3-9*01   12   ----------------------------------------------------.......-------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    ---------------------------------------------------------------------.....................  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_312    283  AGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (48/48)   IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_347102

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_313    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_313    91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_313    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_313    271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_347103

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           439     2e-125
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	292	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	74	0	0	100
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	112	2	0	98.2
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	287	6	0	98


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_314    5    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCA  94
V  98.0% (287/293)  IGHV5-51*03  2    ..................................................................................C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  F  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_314    95   ACTTCTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACA  184
V  98.0% (287/293)  IGHV5-51*03  92   G..A...................................................G............................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  P  Q  W  S  S  L  K  A  S  D  
                    Query_314    185  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCCGCAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  98.0% (287/293)  IGHV5-51*03  182  ............................................................T.............................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_314    275  CCGCCATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  361
V  98.0% (287/293)  IGHV5-51*03  272  .......................----------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    ------------------------......C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_347100

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           357     1e-100
IGHD1-1*01                                                                                            10.3    119   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	TGCAGGACCCA	TGGAA	GCCTGGGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATGCAGGACCCATGGAAGCCTGGGATTTTTGACTAC	AMQDPWKPGIFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	237	9	0	96.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  V  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_315    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATGTCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.3% (237/246)  IGHV3-21*01  47   .............................................G....AG......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_315    91   AGTGGGTCTCATCCATTAGTAGCAGTAGTAGTTACATATACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.3% (237/246)  IGHV3-21*01  137  ......................T.......................A...........................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  A  D  T  A  V  Y  Y  C  A  M  Q  D  P  W  K  P  G  
                    Query_315    181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGAGCCGCGGACACGGCTGTTTATTACTGTGCGATGCAGGACCCATGGAAGCCTGGGA  270
V  96.3% (237/246)  IGHV3-21*01  227  ............A......A...................A............G.............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD1-1*01   9    -----------------------------------------------------------------------------.....--------  13

                                      ---------->                                  
                                      I  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_315    271  TTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (43/43)   IGHJ4*02     6    --...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_347101

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         399     3e-113
IGHD5-12*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCACAG	TAGTGGCCACG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCACAGTAGTGGCCACGACTACTTTGACTAC	ARLHSSGHDYFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  R  I  S  C  E  G  S  G  Y  T  F  A  T  Y
                    Query_316      1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGCAGTCTCTGAGGATCTCCTGTGAGGGTTCTGGATACACCTTCGCCACCTA  90
V  94.1% (272/289)  IGHV5-10-1*01  6    ........................................G....................A...............G...TA...G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  K  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_316      91   TTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAAGATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  94.1% (272/289)  IGHV5-10-1*01  96   C..................................................G.G....................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  T  D  N  S  I  T  T  A  Y  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_316      181  GTCCTTCCAAGGCCACGTCACCATCTCAACTGACAATTCCATCACCACTGCCTACCTGCAGTGGAACAGTCTGAAGGCCTCGGACACAGC  270
V  94.1% (272/289)  IGHV5-10-1*01  186  ............................G.......G.......G....................G...C.................C..  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          M  Y  Y  C  A  R  L  H  S  S  G  H  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_316      271  CATGTATTATTGCGCGAGACTTCACAGTAGTGGCCACGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  94.1% (272/289)  IGHV5-10-1*01  276  .........C..T......-------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                    
D  90.9% (10/11)    IGHD5-12*01    8    ---------------------------.......T...------------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02       1    --------------------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_319378

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           403     1e-114
IGHD4-17*01                                                                                           18.0    0.69  
IGHJ6*01                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAG	CTACGGTGA	GTCCGAGTACTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTC	ARDLATVSPSTFYYGMDV	292	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	71	4	0	94.7
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	46	5	0	90.2
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	277	19	0	93.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  T 
                    Query_317    4    CAGGTGCAGCTGGTGCAGTCTGGAGCGGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCTTCTGGTTACACCTTTACC  93
V  93.6% (277/296)  IGHV1-18*04  1    .....T....................T.......A..................................G....................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  G  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y 
                    Query_317    94   AGTTACGGTATCACTTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGGGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTAT  183
V  93.6% (277/296)  IGHV1-18*04  91   ..C..........GC........A..............A.......A........................C......A...........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  S  D  D 
                    Query_317    184  GCACAGATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGATCTGACGAC  273
V  93.6% (277/296)  IGHV1-18*04  181  .......A.C...A..G.................C....................C..........C.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  T  F  Y  Y  G  M  D  V  W  G  Q  G  T  T 
                    Query_317    274  ACGGCCGTGTATTACTGTGCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTCTGGGGTCAAGGGACCACG  363
V  93.6% (277/296)  IGHV1-18*04  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------------.........--------------------------------------------------  12
J  98.1% (52/53)    IGHJ6*01     11   -----------------------------------------------------........................G............  47

                                                      
                                       V  T  V  S  S  
                    Query_317    364  GTCACCGTCTCCTCAG  379
J  98.1% (52/53)    IGHJ6*01     48   ................  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_319379

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            286     1e-79
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GAATGAACCCTGAATT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATGAACCCTGAATTC	ARGMNPEF	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	40	11	0	78.4
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	216	33	0	86.7


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  I  F  R  G  H  W  M  T  W  I  R  H  L  P  D  K  G  L  
                    Query_318   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTCGTGGCCACTGGATGACTTGGATTCGCCACCTTCCAGATAAGGGGCTGC  90
V  86.7% (216/249)  IGHV3-7*01  47   ....................................C....A..A..T.T.......GC...G.C.....GGC.....GG.........G  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     Q  W  V  A  N  I  K  E  D  G  S  E  E  H  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_318   91   AGTGGGTGGCCAATATAAAGGAAGATGGAAGTGAAGAGCACTATGGTGACTCTGTGAAGGGCCGATTCACCATCTCCCGAGACAACGCCC  180
V  86.7% (216/249)  IGHV3-7*01  137  .............C......C.............GA.AT......TG..............................A...........A  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                     Q  N  S  L  F  L  Q  M  N  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  M  N  P  E  F  W  
                    Query_318   181  AGAACTCTCTGTTTTTGCAGATGAACAACCTGAGAGTCGAAGACACGGCTGTATATTACTGTGCGAGAGGAATGAACCCTGAATTCTGGG  270
V  86.7% (216/249)  IGHV3-7*01  227  .......A....A.C....A.......G........C...G...........G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  94.3% (33/35)    IGHJ4*02    14   -------------------------------------------------------------------------------------.....  18

                                                                   
                                     G  Q  G  T  L  V  I  V  S  S  
                    Query_318   271  GCCAGGGAACCCTGGTCATCGTCTCGTCAG  300
J  94.3% (33/35)    IGHJ4*02    19   ..................C......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_319373

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           372     2e-105
IGHD2-2*01                                                                                            23.8    0.011 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAG	TTGTAGTAGTAACACCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGTTGTAGTAGTAACACCTGCTACTACGAAATGGACGTC	ARVSCSSNTCYYEMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	241	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_319    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.8% (241/244)  IGHV4-59*01  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_319    91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGGTAGACACGTCCAAGAAC  180
V  98.8% (241/244)  IGHV4-59*01  139  .......................................................................A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  C  S  S  N  T  C  Y 
                    Query_319    181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTAAGTTGTAGTAGTAACACCTGCTAC  270
V  98.8% (241/244)  IGHV4-59*01  229  ...............................................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (16/18)    IGHD2-2*01   7    --------------------------------------------------------------------...........C..G...----  24
J  96.2% (50/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_319    271  TACGAAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  96.2% (50/52)    IGHJ6*02     15   ....GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_319370

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           339     1e-95
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	N/A	N/A	GGGGCCTGTG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGCCTGTGTACTTTGACCAC	AKGPVYFDH	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_320    1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-23*01  47   ....................G....................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  I  G  G  G  D  I  T  Y  Y  A  D  S  V  N  G  R  F  T  I  S  R  D  N  S  
                    Query_320    91   AGTGGGTCTCAAGTATTATTGGTGGTGGTGATATCACATACTATGCAGACTCCGTCAACGGCCGGTTCACCATCTCCAGAGACAATTCGA  180
V  93.9% (232/247)  IGHV3-23*01  137  ...........GC.....G....A......G..G.........C...........G..G.............................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  T  L  Y  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  P  V  Y  F  D  H  
                    Query_320    181  AGAATACGCTTTATCTGCAAATGAACGGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGGGGCCTGTGTACTTTGACCACT  270
V  93.9% (232/247)  IGHV3-23*01  227  ....C.....G...............A........................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  91.3% (42/46)    IGHJ4*02     3    -----------------------------------------------------------------------------.........T...  15

                                                                       
                                      W  G  Q  G  R  L  V  T  V  S  S  
                    Query_320    271  GGGGCCAGGGAAGGTTGGTCACCGTCTCCTCAG  303
J  91.3% (42/46)    IGHJ4*02     16   ............CCC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_319371

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           283     1e-78
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCAGC	ATACATCTCTGGT	CACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAGCATACATCTCTGGTCACCCCTAC	SAYISGHPY	240	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	102	12	0	89.5
Total	N/A	N/A	239	210	29	0	87.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  V  S  V  H  Y  M  S  W  V  R  R  A  P  G  R  G  L  
                    Query_321    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCGTCAGTGTACACTACATGAGCTGGGTCCGCCGGGCTCCAGGGAGGGGACTGG  90
V  87.9% (210/239)  IGHV3-53*01  47   ...............................G...A........AGCA.....................A...........A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  L  T  S  G  K  T  Y  Y  T  D  S  A  M  G  R  F  T  I  S  R  D  S  S  K  
                    Query_321    91   AGTGGGTCTCAGCGATTCTTACCAGTGGTAAGACATACTACACAGACTCCGCGATGGGCCGATTCACCATCTCCAGAGACTCTTCCAAGA  180
V  87.9% (210/239)  IGHV3-53*01  137  ............TT...TA..G.G......GC.........G.........T..A.........................AA........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->    
                                      N  T  V  N  L  Q  M  N  S  L  S  A  G  D  T  A  F  Y  Y  C  S  A  Y  I  S  G  H  P  Y  W  
                    Query_321    181  ACACAGTGAATCTTCAAATGAACAGCCTGAGCGCCGGGGACACGGCCTTCTATTACTGTTCAGCATACATCTCTGGTCACCCCTACTGGG  270
V  87.9% (210/239)  IGHV3-53*01  227  ....GC..T......................A....A..........G.G.........-------------------------------  285
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                                
D  84.6% (11/13)    IGHD5-18*01  5    ----------------------------------------------------------------.....G..A....-------------  17
J  100.0% (38/38)   IGHJ4*02     11   ----------------------------------------------------------------------------------........  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_321    271  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  300
J  100.0% (38/38)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_319376

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           352     3e-99
IGHD2-15*01                                                                                           12.2    34   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCAACC	GGTAGC	GCTAG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAACCGGTAGCGCTAGCTAC	STGSASY	292	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	69	5	0	93.2
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	19	5	0	79.2
FR3-IMGT	178	291	114	100	14	0	87.7
Total	N/A	N/A	287	256	31	0	89.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  A  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  N  F  A  
                    Query_322    5    AGGTCCAGCTGGTACAGTCTGGAGCAGCGGTGAAAAAGCCCGGGGAGTCTCTGAAGATTTCCTGTAAGGGCTCTGGATACAACTTTGCCA  94
V  89.2% (256/287)  IGHV5-51*01  2    ....G........G.............A..............................C...........T..........G....A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  L  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  N  L  G  N  Y  D  T  R  Y  
                    Query_322    95   ATTACTGGCTTGGCTGGGTGCGCCAGATGCCCGGGAAGGGCCTGGAGTGGATGGGGATCATTAATCTTGGTAACTATGATACCAGATACA  184
V  89.2% (256/287)  IGHV5-51*01  92   GC......A.C..........................A.......................CT...C....G...C..............  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  A  P  F  Q  D  L  A  T  I  S  A  D  K  S  I  D  T  V  Y  L  Q  W  P  S  L  K  A  S  D  
                    Query_322    185  GAGCGCCCTTCCAAGACCTGGCCACCATCTCAGCCGACAAATCCATCGACACCGTCTACCTCCAGTGGCCCAGCCTGAAGGCCTCGGACA  274
V  89.2% (256/287)  IGHV5-51*01  182  .CC..T.........G..A..T..................G......AG.....C......G......AG....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----CDR3-IMGT----->                                  
                                      T  A  I  Y  Y  C  S  T  G  S  A  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_322    275  CCGCCATATATTACTGTTCAACCGGTAGCGCTAGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  346
V  89.2% (256/287)  IGHV5-51*01  272  .......G.........-------------------------------------------------------  288
                                      T  A  M  Y  Y  C                                                        
D  100.0% (6/6)     IGHD2-15*01  17   -----------------------......-------------------------------------------  22
J  100.0% (38/38)   IGHJ4*02     11   ----------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_319374

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           403     1e-114
IGHD4-17*01                                                                                           18.0    0.70  
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCCGACCGAAGG	GGTGACTAC	GACGAGGGGGA	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCGACCGAAGGGGTGACTACGACGAGGGGGAATTACAACTATTACTACGGTATGGACGTC	ARGPTEGVTTTRGNYNYYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  T  F  R  N  Y
                    Query_323    1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAGGAATTA  90
V  94.5% (274/290)  IGHV1-69*01  6    ..................G.......................................................G.........C.GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  V  V  G  T  P  N  Y  A  Q
                    Query_323    91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTGTCGTTGGTACACCAAATTACGCACA  180
V  94.5% (274/290)  IGHV1-69*01  96   ................................................................A..T........G....C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  N  I  D  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_323    181  GAAATTCCAGGGCAGAGTCACAATTACCGCGGACGAATCCACCAACATAGACTACATGGAGTTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  94.5% (274/290)  IGHV1-69*01  186  ...G.................G....................G.G..C..C..........C............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  Y  C  A  R  G  P  T  E  G  V  T  T  T  R  G  N  Y  N  Y  Y  Y  G  M  D  V  W  G  Q
                    Query_323    271  CGTGTATTACTGTGCGAGAGGCCCGACCGAAGGGGTGACTACGACGAGGGGGAATTACAACTATTACTACGGTATGGACGTCTGGGGCCA  360
V  94.5% (274/290)  IGHV1-69*01  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (9/9)     IGHD4-17*01  8    ---------------------------------.........------------------------------------------------  16
J  93.5% (58/62)    IGHJ6*02     1    -----------------------------------------------------.....T....C..........................  37

                                                               
                                        G  T  T  V  I  V  S  S 
                    Query_323    361  AGGGACCACGGTCATCGTCTCTTCA  385
J  93.5% (58/62)    IGHJ6*02     38   ..............C......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_140145

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           285     4e-79
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACTTTGACTTC	ARVSTSAYYFDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	213	31	0	87.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_324    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGACAACCCCCAGGAAAGGGACTGGAG  90
V  87.3% (213/244)  IGHV4-59*01  49   .................................T........A.....T.C.........A....G..G........G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  P  F  D  T  S  K  R 
                    Query_324    91   TGGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGCCCTTTGACACGTCCAAGAGG  180
V  87.3% (213/244)  IGHV4-59*01  139  .......GGT....C...........G.G..C...C................A..G............AT.AG.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  Y  Y  F  D 
                    Query_324    181  CAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATACTACTTTGAC  270
V  87.3% (213/244)  IGHV4-59*01  229  .............A....AGC..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-2*01   17   ---------------------------------------------------------------------......---------------  22
J  91.3% (42/46)    IGHJ4*02     1    -------------------------------------------------------------------------------...........  11

                                      -->                                
                                       F  W  G  R  G  T  L  V  V  V  S  S
                    Query_324    271  TTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  305
J  91.3% (42/46)    IGHJ4*02     12   .A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_316542

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           422     2e-120
IGHD3-10*01                                                                                           21.8    0.046 
IGHJ5*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCTC	TTCGCGGACTTATTATA	TGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCTCTTCGCGGACTTATTATATGGACTGGTTCGACCCC	ARASSRTYYMDWFDP	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	279	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  A  S  G  Y  S  F  P  N  Y
                    Query_325    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAGGGCTTCTGGATACAGCTTTCCCAACTA  90
V  96.9% (279/288)  IGHV5-51*01  6    ..............................................................A..G................A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  K  Y  S  P
                    Query_325    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAAATACAGCCC  180
V  96.9% (279/288)  IGHV5-51*01  96   .................................................................G..............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  L  V  T  I  S  A  N  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_325    181  GTCCTTCCAAGGCCTGGTCACCATCTCAGCCAACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (279/288)  IGHV5-51*01  186  ..............A................G............G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  A  S  S  R  T  Y  Y  M  D  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_325    271  CATGTATTACTGTGCGAGGGCCTCTTCGCGGACTTATTATATGGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  96.9% (279/288)  IGHV5-51*01  276  ..................------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  88.2% (15/17)    IGHD3-10*01  13   ------------------------....G...G........-------------------------------------------------  29
J  100.0% (48/48)   IGHJ5*02     4    --------------------------------------------..............................................  49

                                        
                                        
                    Query_325    361  AG  362
J  100.0% (48/48)   IGHJ5*02     50   ..  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_316543

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           344     6e-97
IGHD2-2*01                                                                                            29.5    2e-04
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGACCTATAA	ATATTGTAGTAGTAC	TAACAGCTGCTATTCCTTC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGACCTATAAATATTGTAGTAGTACTAACAGCTGCTATTCCTTCTTCGACCCC	ARGTYKYCSSTNSCYSFFDP	237	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	24	0	0	100
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	110	4	0	96.5
CDR3-IMGT (germline)	237	243	7	6	1	0	85.7
Total	N/A	N/A	232	226	6	0	97.4


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  T 
                    Query_326    12   TGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGTACT  101
V  97.4% (226/232)  IGHV3-74*01  64   ........................................................................................T.  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 
                    Query_326    102  AATAGTGATGGGAGTAGCACAAGCTACGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGTTGTATTTG  191
V  97.4% (226/232)  IGHV3-74*01  154  ...................................C.............................................C.....C..  243
                                       N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 

                                      --------------------------------------------><-------------------------CDR3-IMGT----------
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  T  Y  K  Y  C  S  S  T  N  S  C  Y 
                    Query_326    192  CAAATGAATAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGACCTATAAATATTGTAGTAGTACTAACAGCTGCTAT  281
V  97.4% (226/232)  IGHV3-74*01  244  ........C......................................A....--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (15/15)   IGHD2-2*01   4    --------------------------------------------------------------...............-------------  18

                                      -------------->                                  
                                       S  F  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_326    282  TCCTTCTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
J  100.0% (43/43)   IGHJ5*02     9    ------...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_140147

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     3e-93
IGHD3-10*01                                                                                           14.1    8.5  
IGHJ1*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	N/A	TTCGGGG	CTGCCTCATGAGGACC	TCCAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAGATTCGGGGCTGCCTCATGAGGACCTCCAGCAC	AQDSGLPHEDLQH	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  Y  S  M  S  W  V  R  Q  A  P  G  K  R  L  
                    Query_327    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCTACTATTCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGCGGCTGG  90
V  92.4% (231/250)  IGHV3-23*01  47   ............................................AG....G................................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  M  S  G  T  G  G  N  T  Y  Y  A  D  S  V  K  D  R  F  T  I  Y  R  D  N  S  
                    Query_327    91   AGTGGGTCTCAGGTATGAGTGGTACTGGTGGTAACACATACTACGCGGACTCCGTGAAGGACCGGTTCACCATCTACAGAGACAACTCCA  180
V  92.4% (231/250)  IGHV3-23*01  137  ............C...T.......G........G............A.............G..............C.........T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  S  T  V  Y  L  Q  M  N  S  L  R  V  D  D  T  A  I  Y  Y  C  A  Q  D  S  G  L  P  H  E  
                    Query_327    181  AGAGCACGGTATATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCCATATATTACTGTGCGCAAGATTCGGGGCTGCCTCATGAGG  270
V  92.4% (231/250)  IGHV3-23*01  227  ...A....C.G.........................C...G.........G..............A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-10*01  13   ----------------------------------------------------------------------.......-------------  19

                                      ---------->                                
                                      D  L  Q  H  W  G  Q  G  T  L  V  T  V  S  S
                    Query_327    271  ACCTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTC  313
J  100.0% (40/40)   IGHJ1*01     11   ---........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_297088

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-66*02                                                                                           310     1e-86
IGHD6-6*01                                                                                            19.9    0.16 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-66*02	IGHD6-6*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TAAAAAGACTGGG	GTATACCAACTCGTCC	GGGACGAACC	TTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAAAAGACTGGGGTATACCAACTCGTCCGGGACGAACCTTGAATAC	VKRLGYTNSSGTNLEY	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	240	1	1	0	0	100
Total	N/A	N/A	240	219	21	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  P  S  C  A  V  S  G  F  S  V  S  T  N  Y  M  S  W  F  R  Q  A  P  G  K  G  L  
                    Query_328    1    GGTCCCTGAGACCCTCCTGTGCAGTTTCTGGGTTCAGCGTCAGTACCAATTACATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.2% (219/240)  IGHV3-66*02  47   ............T...........CC.....A....C........G...C............G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  L  Y  S  G  G  V  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  *  
                    Query_328    91   AGTGGGTCTCAGTTCTTTATAGTGGTGGTGTCACATTCTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCTAGA  180
V  91.2% (219/240)  IGHV3-66*02  137  ..............A.......C......AG.....A.................................................A...  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  L  Y  L  Q  M  E  S  L  R  T  E  D  T  A  V  Y  Y  C  V  K  R  L  G  Y  T  N  S  S  
                    Query_328    181  ACACATTGTATCTGCAAATGGAGAGCCTGAGAACTGAGGACACGGCTGTCTATTACTGTGTAAAAAGACTGGGGTATACCAACTCGTCCG  270
V  91.2% (219/240)  IGHV3-66*02  227  ....GC.......T......A.C.........G................G..........------------------------------  286
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                                
D  87.5% (14/16)    IGHD6-6*01   3    -------------------------------------------------------------------------.....G..G.......-  18

                                      ---------------->                                  
                                      G  T  N  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_328    271  GGACGAACCTTGAATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.6% (41/42)    IGHJ4*02     7    ---------....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_32563

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           378     3e-107
IGHD3-22*01                                                                                           33.4    2e-05 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCGGATC	ACTATGATAGTAGTGGT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCGGATCACTATGATAGTAGTGGTTACTACTACTATAATATGGACGTC	ARVPDHYDSSGYYYYNMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  V  N  N  Y
                    Query_329    1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGTAAGGCTTCTGGAGGCACCGTCAACAACTA  90
V  91.7% (266/290)  IGHV1-69*06  6    ..................G.........................................C..................T...G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  H  G  L  E  W  V  G  V  V  I  L  L  L  D  T  S  Y  Y  P  Q
                    Query_329    91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACACGGGCTTGAGTGGGTGGGAGTGGTCATCCTTCTCTTGGATACATCATATTACCCGCA  180
V  91.7% (266/290)  IGHV1-69*06  96   .................................A............A......G.A......C.A....T.G....G..A.C...G.A..  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  S  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  D  D  T  A
                    Query_329    181  GAAGTTCCAGGGCAGAGTCTCCATTACCGCGGACAAATCCACGAGCACTGCCTACATGGAGTTGAGCAGCCTGAGATCTGATGACACGGC  270
V  91.7% (266/290)  IGHV1-69*06  186  ...................A.G..........................A............C...................G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        V  Y  Y  C  A  R  V  P  D  H  Y  D  S  S  G  Y  Y  Y  Y  N  M  D  V  W  G  Q  G  T  A  I
                    Query_329    271  CGTTTATTACTGTGCGAGAGTTCCGGATCACTATGATAGTAGTGGTTACTACTACTATAATATGGACGTCTGGGGCCAAGGGACCGCGAT  360
V  91.7% (266/290)  IGHV1-69*06  276  ...G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD3-22*01  6    -----------------------------.................--------------------------------------------  22
J  91.2% (52/57)    IGHJ6*02     6    ----------------------------------------------...........CGG.........................A..G.  49

                                                   
                                        T  V  S  S 
                    Query_329    361  CACCGTCTCCTCA  373
J  91.2% (52/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_297081

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           347     7e-98
IGHD4-4*01                                                                                            21.8    0.041
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD4-4*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGAAAAA	TGACTACAGTA	GTGTTGAACTCGGTG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGAAAAATGACTACAGTAGTGTTGAACTCGGTGGGTTCGACCCC	ARMKNDYSSVELGGFDP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  T  G  F  T  F  S  Y  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_330    1    GGTCCCTGAGACTCTCCTGTGCTGCCACTGGATTCACCTTCAGTTATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-48*03  47   ......................A...T.................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  T  G  T  N  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_330    91   AGTGGATTTCATATATTAGTAGTACTGGCACTAACATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (235/248)  IGHV3-48*03  137  .....G.......C..........G...T.G..C........................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  D  D  T  A  L  Y  Y  C  A  R  M  K  N  D  Y  S  S  
                    Query_330    181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTCTTTATTACTGTGCGAGAATGAAAAATGACTACAGTAGTG  270
V  94.8% (235/248)  IGHV3-48*03  227  ............A...........................G.........G.................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD4-4*01   1    ----------------------------------------------------------------------------...........---  11

                                      GT-------------------->                                  
                                      V  E  L  G  G  F  D  P  W  G  R  G  T  Q  V  T  V  S  S  
                    Query_330    271  TTGAACTCGGTGGGTTCGACCCCTGGGGCCGGGGAACCCAGGTCACCGTCTCCTCAG  327
J  95.6% (43/45)    IGHJ5*02     7    ------------..................A........T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_140141

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	273	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_331    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  94.8% (273/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_331    91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGATTCTGATACCAGATACAGCCC  180
V  94.8% (273/288)  IGHV5-51*01  96   .....................G.T..........................G..............G...C....................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_331    181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (273/288)  IGHV5-51*01  186  ...............G.........................T.........................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_331    271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  94.8% (273/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_297083

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           410     1e-116
IGHD1-1*01                                                                                            10.3    134   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAACG	GGTAACCCCATATCGCGGC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTAT	ARGTGNPISRLGY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_332    1    GCAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTA  90
V  95.2% (276/290)  IGHV1-46*01  6    ..................G.C.....................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  A  G  S  T  N  Y  A  Q
                    Query_332    91   CTATGTGCACTGGGTACGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGCTGGTAGCACAAATTACGCACA  180
V  95.2% (276/290)  IGHV1-46*01  96   ....A..........G....................................................G...........GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  A  S  T  V  Y  L  D  L  S  S  L  K  S  D  D  T  A
                    Query_332    181  GAAATTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCGCGAGCACAGTCTACTTGGACCTGAGCAGCCTTAAATCTGACGACACGGC  270
V  95.2% (276/290)  IGHV1-46*01  186  ...G....................................A..............A....G...........G.G......G........  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  G  T  G  N  P  I  S  R  L  G  Y  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_332    271  CGTGTATTACTGTGCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  356
V  95.2% (276/290)  IGHV1-46*01  276  ....................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (5/5)     IGHD1-1*01   11   --------------------.....-------------------------------------------------------------  15
J  92.9% (39/42)    IGHJ4*02     7    --------------------------------------------...A...C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_297082

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           319     2e-89
IGHD6-13*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTCC	TAGTAGCAGCTGGTA	GTGTGAAGAAGAATCGCA	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTCCTAGTAGCAGCTGGTAGTGTGAAGAAGAATCGCAACTCCTACGCTGTGGACGTC	AKDLLVAAGSVKKNRNSYAVDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  G  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_333    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTCGCTATGGCATGTACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-30*18  47   ............................................A...........C.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  S  Y  D  G  S  Y  K  S  H  A  D  F  V  E  G  R  F  T  V  S  R  D  N  S  
                    Query_333    91   AGTGGGTTGCTTTTATTTCATATGATGGGAGTTACAAATCCCATGCCGACTTCGTGGAGGGCCGATTCACTGTCTCCAGGGACAATTCCA  180
V  90.8% (227/250)  IGHV3-30*18  137  .......G..AG....A...........A...A.T....A.T....A....C....A.............CA.......A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      R  N  T  L  Y  L  Q  M  N  S  Q  R  A  E  G  T  A  V  Y  Y  C  A  K  D  L  L  V  A  A  G  
                    Query_333    181  GGAACACGCTGTATCTACAAATGAACAGCCAGAGAGCTGAGGGCACGGCTGTTTATTATTGTGCGAAAGATCTCCTAGTAGCAGCTGGTA  270
V  90.8% (227/250)  IGHV3-30*18  227  A...............G.............T...........A.........G.....C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (14/15)    IGHD6-13*01  6    ---------------------------------------------------------------------------...C...........  20

                                      -CDR3-IMGT--------------------------->                                 
                                      S  V  K  K  N  R  N  S  Y  A  V  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_333    271  GTGTGAAGAAGAATCGCAACTCCTACGCTGTGGACGTCTGGGGCCGGGGGACCACGGTCACCGTCTCCTCA  341
J  90.6% (48/53)    IGHJ6*02     10   ------------------...A.....G.A...............AA........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_231157

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            327     9e-92
IGHD3-10*01                                                                                           12.2    32   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TTAAGGGAAGTA	GTTCGTCGACTTATT	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTAAGGGAAGTAGTTCGTCGACTTATTACTGGTTCGACCCC	VKGSSSSTYYWFDP	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	241	1	1	0	0	100
Total	N/A	N/A	241	225	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  L  V  S  G  G  S  I  T  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_334    1    ACCCTGTCCCTCACCTGCCTTGTCTCTGGTGGGTCCATTACCAGTAGTAACTGGTGGTCTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.4% (225/241)  IGHV4-4*02   49   ..................GC............C.....C.G................AG...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  A  D  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  K 
                    Query_334    91   GAGTGGATTGCGGATATCTATTATAGTGGGAGCACCAATTACAACCCGTCCCTGAAGAGTCGAGTCACCATCTCATTAGACAAGTCCAAG  180
V  93.4% (225/241)  IGHV4-4*02   139  ..........G...A......C................C..............C.................A...G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  K  G  S  S  S  S  T  Y  Y 
                    Query_334    181  AACCAGTTCTCCCTGAAACTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGTTAAGGGAAGTAGTTCGTCGACTTATTAC  270
V  93.4% (225/241)  IGHV4-4*02   229  .................G......................................C....-----------------------------  289
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  80.0% (12/15)    IGHD3-10*01  12   -------------------------------------------------------------------------.....GG..G.....--  26
J  95.8% (46/48)    IGHJ5*02     4    ----------------------------------------------------------------------------------------..  5

                                      ----------->                                  
                                       W  F  D  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_334    271  TGGTTCGACCCCTGGGGCCGGGGAACCCTGGTCACTGTCTCCTCAG  316
J  95.8% (46/48)    IGHJ5*02     6    ...................A...............C..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_297084

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         341     5e-96
IGHD3-16*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	GGGGGAGT	GCGGGTATTCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGGGGAGTGCGGGTATTCCTCTAC	AREGGVRVFLY	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  V  R  Q  P  P  G  K  G  L 
                    Query_335      1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCTATTAGCAGTGGTTATTACTGGGGCTGGGTCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  94.0% (233/248)  IGHV4-38-2*02  49   ..................A................C..C...........C............A..........................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  V  Y  H  S  G  S  T  F  Y  S  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K 
                    Query_335      91   GAGTGGATTGGGAGTGTCTATCATAGTGGGAGCACCTTCTACAGCCCGTCCCTCAAGAGCCGAGTCAGCATTTCAGTAGACACGTCCAAG  180
V  94.0% (233/248)  IGHV4-38-2*02  139  ...............A.....................A.....A...............T.......C...A..................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                         N  Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  V  R  V  F  L 
                    Query_335      181  AACCAGTTCTCCCTGAAGGTTAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGAAGGGGGAGTGCGGGTATTCCTC  270
V  94.0% (233/248)  IGHV4-38-2*02  229  ..................C.G..C................................C...........----------------------  296
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD3-16*01    18   ---------------------------------------------------------------------........-------------  25
J  100.0% (38/38)   IGHJ4*02       11   -----------------------------------------------------------------------------------------.  11

                                        -->                                  
                                         Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_335      271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (38/38)   IGHJ4*02       12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_297087

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           361     4e-102
IGHD3-22*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GTTAGCGGG	GATAGTAG	CATCTAGTGCAGTTAGAGCGGACTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTTAGCGGGGATAGTAGCATCTAGTGCAGTTAGAGCGGACTTT	AKLAGIVASSAVRADF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	239	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_336    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (239/247)  IGHV3-23*01  47   ...........................................C.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  V  S  G  S  G  G  A  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_336    91   AGTGGGTCTCAGCTGTCAGTGGTAGTGGTGGTGCCACATTCTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.8% (239/247)  IGHV3-23*01  137  ..............A.T...............AG.....A..................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  L  A  G  I  V  A  S  
                    Query_336    181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAAGTTAGCGGGGATAGTAGCATCTA  270
V  96.8% (239/247)  IGHV3-23*01  227  .........................................................A.........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD3-22*01  11   ----------------------------------------------------------------------------........------  18

                                      T------------------>                                  
                                      S  A  V  R  A  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_336    271  GTGCAGTTAGAGCGGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (34/34)   IGHJ4*02     15   --------------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_297086

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           304     1e-84
IGHD3-16*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	221	27	0	89.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_337    4    CCCTGAGACTCTCCTGTACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  89.1% (221/248)  IGHV4-61*01  50   .....TCC...A....C.....C.................C....G.AG.T..........C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S  
                    Query_337    94   TGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCCA  183
V  89.1% (221/248)  IGHV4-61*01  140  ...A.........GT............G......CAC..A.........................G.CA....A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y  
                    Query_337    184  AAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTATC  273
V  89.1% (221/248)  IGHV4-61*01  230  .G................A.................................G...............----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-16*02  24   ------------------------------------------------------------------------------------......  29

                                      ---------------->                                  
                                      R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_337    274  GTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  324
D  100.0% (7/7)     IGHD3-16*02  30   .--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    -.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_261619

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            397     8e-113
IGHD3-10*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGAC	TGGTTCGGGGA	CTT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTAC	ARVTGSGTYSFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  G  S  Y
                    Query_338    1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCGGCAGCTA  90
V  93.8% (272/290)  IGHV1-8*02   6    ..................G...............................................................AC......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  D  Y  A  Q
                    Query_338    91   TGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATGAATCCTAACAGTGGGAACACAGACTATGCACA  180
V  93.8% (272/290)  IGHV1-8*02   96   .........................A..................................C...........T.......G.........  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  Y  M  E  L  S  S  L  G  S  A  D  T  A
                    Query_338    181  GAAGTTCCGGGGCAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCTACATGGAGCTGAGTAGTCTGGGATCTGCCGACACGGC  270
V  93.8% (272/290)  IGHV1-8*02   186  ........A.......................A...C..C.T........................C..C...A......AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  V  T  G  S  G  T  Y  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_338    271  CGTCTATTACTGTGCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  93.8% (272/290)  IGHV1-8*02   276  ...G................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (11/11)   IGHD3-10*01  10   ------------------------...........---------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    --------------------------------------...A......C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_261611

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           336     1e-94
IGHD3-22*01                                                                                           31.5    6e-05
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTGGCCCTTCTTTTGGGGGAG	ACTATGATAGCAGTGGTTA	CCAGCAAGGGAC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCTGGCCCTTCTTTTGGGGGAGACTATGATAGCAGTGGTTACCAGCAAGGGACCTGGTTGGACCCC	ARAGPSFGGDYDSSGYQQGTWLDP	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  V  W  I  R  Q  A  P  G  K  G  L  
                    Query_339    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGGTATGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-11*06  47   ........................................................AGC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  F  S  T  Y  T  S  Y  A  G  S  V  E  G  R  F  T  V  S  R  D  N  G  
                    Query_339    91   AGTGGGTTTCATACATTAGTACTTTCAGTACTTACACAAGCTACGCAGGCTCTGTGGAGGGCCGTTTCACCGTCTCCAGAGACAACGGCA  180
V  93.2% (232/249)  IGHV3-11*06  137  .....................G.AGT....G........A........A.......A.......A......A...............C..  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  G  P  S  F  G  G  
                    Query_339    181  GGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGCGAGCTGGCCCTTCTTTTGGGGGAG  270
V  93.2% (232/249)  IGHV3-11*06  227  A...................................................G............A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ----CDR3-IMGT------------------------------>                                  
                                      D  Y  D  S  S  G  Y  Q  Q  G  T  W  L  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_339    271  ACTATGATAGCAGTGGTTACCAGCAAGGGACCTGGTTGGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  348
D  94.7% (18/19)    IGHD3-22*01  6    ..........T........-----------------------------------------------------------  24
J  95.7% (45/47)    IGHJ5*02     5    -------------------------------......C..................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_261610

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            353     9e-100
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     4e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	233	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	9	19	11	10	1	0	90.9
CDR1-IMGT	20	43	24	23	1	0	95.8
FR2-IMGT	44	94	51	51	0	0	100
CDR2-IMGT	95	118	24	24	0	0	100
FR3-IMGT	119	232	114	113	1	0	99.1
CDR3-IMGT (germline)	233	240	8	8	0	0	100
Total	N/A	N/A	232	229	3	0	98.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         E  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  
                    Query_340    9    GTGAAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAA  98
V  98.7% (229/232)  IGHV3-7*01   65   ...C.....................T................................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_340    99   AGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGC  188
V  98.7% (229/232)  IGHV3-7*01   155  ................................................T.........................................  244
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-----------------------CDR3-IMGT-------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  I  D  Y  Y  Y  Y  
                    Query_340    189  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACG  278
V  98.7% (229/232)  IGHV3-7*01   245  ....................................................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------..........----------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---------------------------------------------------------------------------.......C..C....  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_340    279  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  322
J  96.6% (57/59)    IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_261613

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           363     1e-102
IGHD2-8*01                                                                                            16.1    2.2   
IGHJ3*01                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-8*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACGGTAGTT	ATGGTGTA	AG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACGGTAGTTATGGTGTAAGTGCTTCTGATCTC	ARDDGSYGVSASDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  V  S  T  Y  E  M  N  W  F  R  Q  A  P  G  K  G  L  
                    Query_341    1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCGTCAGTACTTATGAAATGAACTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-48*03  47   .....................C................T......G................G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  I  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_341    91   AGTGGGTTTCATATATTAGTATTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAGCGCCG  180
V  96.4% (241/250)  IGHV3-48*03  137  .............C.......G..............................................................A....A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  D  G  S  Y  G  V  
                    Query_341    181  AGAACTCACTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATGACGGTAGTTATGGTGTAA  270
V  96.4% (241/250)  IGHV3-48*03  227  ................G.....................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD2-8*01   15   ---------------------------------------------------------------------------------........-  22

                                      ------------->                                  
                                      S  A  S  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_341    271  GTGCTTCTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  318
J  93.6% (44/47)    IGHJ3*01     4    -.....T....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_261612

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           410     1e-116
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ2*01                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGA	TACTATGACAGTAGTGGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTC	ARDGYYDSSGYYYDL	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  S  Y  S  F  S  S  H 
                    Query_342    2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTAGTTACAGTTTTAGCAGCCAC  91
V  95.2% (276/290)  IGHV1-18*04  7    .....................................................................G......CC....C....T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  D  Y  A  R 
                    Query_342    92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGGTGGATCAGCGGTTACAATGGTAACACAGACTATGCACGG  181
V  95.2% (276/290)  IGHV1-18*04  97   ................................A.................A..........C................A.........A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  A  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  T  S  D  D  T  A 
                    Query_342    182  AAGTTCCAGGGCAGAGTCACCATGACCGCAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGACATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*04  187  ...C.......................A.............................................G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  D  G  Y  Y  D  S  S  G  Y  Y  Y  D  L  W  G  R  G  T  L  V  T  V  S  S 
                    Query_342    272  GTGTATTACTGTGCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTCTGGGGCCGGGGAACCCTGGTCACTGTCTCCTCA  361
V  95.2% (276/290)  IGHV1-18*04  277  ...............A....----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  95.2% (20/21)    IGHD3-22*01  5    ------------------------........T............---------------------------------------------  25
J  91.3% (42/46)    IGHJ2*01     8    ---------------------------------------------....T...T...........T..C.....................  52

                                       
                                       
                    Query_342    362  G  362
J  91.3% (42/46)    IGHJ2*01     53   .  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_261615

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            319     2e-89
IGHD3-9*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAAGAGCGGTACGCATTGAT	ACTGTTTATTA	CGAGGGGCCTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAAGAGCGGTACGCATTGATACTGTTTATTACGAGGGGCCTCCTGACTAC	ATRAVRIDTVYYEGPPDY	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  N  N  S  N  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_343   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGTCCATCAATAATAGTAACTGGTGGACTTGGATTCGCCAGCCCCCAGGAAAGGGGCTG  90
V  91.8% (224/244)  IGHV4-4*01  49   ................................C.......GC.G..............G....G.C..............G.........  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  I  D  S  G  S  T  N  Y  N  P  S  L  M  S  R  V  I  I  S  L  D  K  S  K 
                    Query_343   91   GAGTGGATTGGGGAAATTATTGATAGTGGGAGCACCAACTACAACCCGTCCCTCATGAGTCGAGTCATCATCTCACTAGACAAGTCCAAG  180
V  91.8% (224/244)  IGHV4-4*01  139  .................CTA.C.................................A...........C...A...G..............  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                      N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  T  R  A  V  R  I  D  T  V 
                    Query_343   181  AATCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGACAAGAGCGGTACGCATTGATACTGTT  270
V  91.8% (224/244)  IGHV4-4*01  229  ..C..............G....G................................G........--------------------------  292
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  90.9% (10/11)    IGHD3-9*01  17   ------------------------------------------------------------------------------------....G.  22

                                     GT--------------------->                                  
                                      Y  Y  E  G  P  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_343   271  TATTACGAGGGGCCTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  90.9% (10/11)    IGHD3-9*01  23   .....-----------------------------------------------------  27
J  100.0% (41/41)   IGHJ4*02    8    -----------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_261614

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_344    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.9% (279/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_344    91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_344    181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  .......C.....................................C...........G......A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_344    271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.9% (279/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_344    361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_261617

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           405     4e-115
IGHD2-2*01                                                                                            21.8    0.046 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAGTAGTGAA	TACCAGCTGCT	GTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCC	ARSSSEYQLLFWFDP	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_345    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCAGCTA  90
V  94.8% (274/289)  IGHV5-51*03  6    .................................................................G............C...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_345    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTAGAGTGGATGGGGTTCATATATCCTGGTGACTCTGATGCCAGATATAGTCC  180
V  94.8% (274/289)  IGHV5-51*03  96   .......................................G............A....C..................A.......C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  K  G  Q  V  T  I  P  V  E  N  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_345    181  GTCCTTCAAAGGCCAGGTCACCATCCCAGTCGAAAACTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTCAAGGCCTCGGACACCGC  270
V  94.8% (274/289)  IGHV5-51*03  186  .......C.................T...C...C..G...................................G.................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  S  S  E  Y  Q  L  L  F  W  F  D  P  W  G  Q  G  T  L  V  T  V  T  S
                    Query_345    271  CATGTATTATTGTGCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCACCTC  360
V  94.8% (274/289)  IGHV5-51*03  276  .........C.........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (11/11)   IGHD2-2*01   16   -------------------------------...........------------------------------------------------  26
J  97.9% (46/47)    IGHJ5*02     5    ---------------------------------------------........................................T....  49

                                        
                                        
                    Query_345    361  AG  362
J  97.9% (46/47)    IGHJ5*02     50   ..  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_261616

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           343     2e-96
IGHD3-9*01                                                                                            29.5    2e-04
IGHJ5*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATCCAC	GTATAACGATGTTTTGACTGG	CCAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATCCACGTATAACGATGTTTTGACTGGCCATAACTGGTTCGACCCC	ARGSTYNDVLTGHNWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  L  S  S  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_346    1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCATTCTCAGTAGTTATGGAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-48*03  47   ....................G...............CCT............A......C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  V  R  G  T  T  I  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  H  A  
                    Query_346    91   AGTGGGTTTCATACATTAGTGTTAGAGGTACTACCATATACTACGCAGACTCTGTGCAGGGCCGATTTACCATCTCTAGAGACCACGCCA  180
V  94.0% (234/249)  IGHV3-48*03  137  ....................AG...T....G.........................A..........C........C......A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      T  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  S  T  Y  N  D  V  
                    Query_346    181  CGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGATCCACGTATAACGATGTTT  270
V  94.0% (234/249)  IGHV3-48*03  227  A....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD3-9*01   1    ----------------------------------------------------------------------------....T.....A...  14

                                      IMGT--------------------->                                  
                                      L  T  G  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_346    271  TGACTGGCCATAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  90.5% (19/21)    IGHD3-9*01   15   .......-----------------------------------------------------  21
J  100.0% (49/49)   IGHJ5*02     3    -----------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_302431

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     3e-115
IGHD2-15*01                                                                                           10.3    134   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CGAGAAG	GGTGG	CGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGACACGAGAAGGGTGGCGGGGCGAACGACTAC	VRHEKGGGANDY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	73	1	0	98.6
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	296	8	6	2	0	75
Total	N/A	N/A	295	277	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P  
                    Query_347    2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCCA  91
V  93.9% (277/295)  IGHV5-51*01  2    ........................................C........................................GC...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  A  D  S  D  T  R  Y  
                    Query_347    92   ATTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAACATCTATCCTGCTGACTCTGACACCAGATACA  181
V  93.9% (277/295)  IGHV5-51*01  92   GC.......................................................T...........G.........T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  L  T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_347    182  GTCTGACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACA  271
V  93.9% (277/295)  IGHV5-51*01  182  .C.C.T.....C.............................................................C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                
                                      T  A  V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_347    272  CCGCCGTGTATTATTGTGTCAGACACGAGAAGGGTGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  356
V  93.9% (277/295)  IGHV5-51*01  272  .....A.......C....CG.....------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                               
D  100.0% (5/5)     IGHD2-15*01  14   --------------------------------.....------------------------------------------------  18
J  97.4% (37/38)    IGHJ4*02     9    -----------------------------------------------....................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_302433

Length=301
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            224     7e-61
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GAATGAACCCTGAATT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATGAACCCTGAATTC	ERNEP*I	220	243	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	40	11	0	78.4
CDR2-IMGT	105	120	24	14	2	8	58.3
FR3-IMGT	121	219	114	89	10	15	78.1
CDR3-IMGT (germline)	220	226	7	7	0	0	100
Total	N/A	N/A	249	198	28	23	79.5


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  I  F  R  G  H  W  M  T  W  I  R  H  L  P  D  K  G  L  
                    Query_348   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTCGTGGCCACTGGATGACTTGGATTCGCCACCTTCCAGATAAGGGGCTGC  90
V  79.5% (198/249)  IGHV3-7*01  47   ....................................C....A..A..T.T.......GC...G.C.....GGC.....GG.........G  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     Q  W  V  A  N  I  K  D  D  G                         S  E  G  P  I  H  H  L  P  R  Q  R  P
                    Query_348   91   AGTGGGTGGCCAATATAAAGGACGATGGAA-----------------------GTGAAGGGCCGATTCACCATCTCCCGAGACAACGCCC  157
V  79.5% (198/249)  IGHV3-7*01  137  .............C......C.A.......GTGAGAAATACTATGTGGACTCT........................A...........A  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                       E  L  S  V  F  A  D  E  Q  P  E  S  R  R  H  G  C  I  L  L  C  E  R  N  E  P  *  I  L  G
                    Query_348   158  AGAACTCTCTGTTTTTGCAGATGAACAACCTGAGAGTCGAAGACACGGCTGTATATTACTGTGCGAGAGGAATGAACCCTGAATTCTGGG  247
V  79.5% (198/249)  IGHV3-7*01  227  .......A....A.C....A.......G........C...G...........G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  94.3% (33/35)    IGHJ4*02    14   -------------------------------------------------------------------------------------.....  18

                                                                   
                                       P  G  N  P  G  H  R  L  V   
                    Query_348   248  GCCAGGGAACCCTGGTCATCGTCTCGTCAG  277
J  94.3% (33/35)    IGHJ4*02    19   ..................C......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 28931934


Query= Query_197654

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           304     1e-84
IGHD3-3*01                                                                                            12.2    33   
IGHJ3*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGGAGT	CTTGGACCTTGATGACGGTGCCATCCAACAGATCGGTGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGAGTCTTGGACCTTGATGACGGTGCCATCCAACAGATCGGTGTTTTTGATAAG	ARDGVLDLDDGAIQQIGVFDK	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  N  T  Y  G  M  Y  W  I  R  Q  A  P  G  K  G  L  
                    Query_349    1    GGTCCCTGAGACTCTCCTGTGTAGCATCTGGATTCTCCTTCAATACTTATGGCATGTATTGGATTCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  88.8% (222/250)  IGHV3-33*01  47   .....................C...G.........A......G..GC.........C.C...G.C.........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  W  H  D  G  S  Q  K  F  Y  V  D  S  V  K  D  R  F  T  V  S  R  D  N  S  
                    Query_349    91   AGTGGGTGGCATCTATATGGCATGATGGAAGTCAGAAATTCTATGTAGACTCTGTGAAGGACCGATTCACCGTCTCCAGAGACAATTCCA  180
V  88.8% (222/250)  IGHV3-33*01  137  ...........GT.......T...........A.T....A.....C......C.......G..........A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      R  N  T  L  Y  L  Q  M  N  I  V  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  V  L  D  L  D  
                    Query_349    181  GGAACACATTGTATCTGCAAATGAACATAGTGAGAGCCGAAGACACGGCTGTATATTACTGTGCGAGAGATGGAGTCTTGGACCTTGATG  270
V  88.8% (222/250)  IGHV3-33*01  227  A......GC..................GCC..........G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-3*01   14   ----------------------------------------------------------------------......--------------  19

                                      DR3-IMGT-------------------------->                                  
                                      D  G  A  I  Q  Q  I  G  V  F  D  K  C  G  Q  G  T  L  V  T  V  S  S  
                    Query_349    271  ACGGTGCCATCCAACAGATCGGTGTTTTTGATAAGTGTGGCCAAGGGACATTGGTCACCGTCTCTTCAG  339
J  90.9% (40/44)    IGHJ3*02     7    -------------------------........TC..G............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_197657

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            286     1e-79
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCTT	TTCGGGGA	A	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCTTTTCGGGGAAAACTGGTTCGGCCCC	ARRLFGENWFGP	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	20	9	0	69
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	18	3	0	85.7
FR3-IMGT	129	245	117	103	11	3	88
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	251	219	29	3	87.3


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  T  V  P  G  G  S  I  S  S  Q  I  W  W  S  W  V  R  Q  A  P  G  K  G  
                    Query_350    1    GGTCCCTGAGACTCTCCTGTACTGTTCCTGGTGGCTCCATCAGCAGTCAGATCTGGTGGAGTTGGGTCCGCCAGGCCCCAGGGAAGGGGC  90
V  87.3% (219/251)  IGHV4-4*02   47   ..A.....TCC...A....CG....CT....................AGT.A......................C...............  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  L  H  S  G  S  T  T  T  Y  I  P  S  L  E  S  R  V  T  I  S  I  D  K  
                    Query_350    91   TTGAGTGGATTGGGGAAATCCTTCATAGCGGGAGCACCACCACTTACATCCCGTCCCTCGAGAGTCGAGTCACCATCTCAATCGACAAGT  180
V  87.3% (219/251)  IGHV4-4*02   137  .G..................TA......T..........A.---....A..........A................A...G.A.......  223
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N     Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  

                                      --FR3-IMGT------------------------------------------------------><-------------CDR3-IMGT--
                                      S  K  N  Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  R  L  F  G  E  N  
                    Query_350    181  CCAAGAACCAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCGGACACGGCCATATATTATTGTGCGAGACGTCTTTTCGGGGAAAACT  270
V  87.3% (219/251)  IGHV4-4*02   224  .....................A......C........................G.G.....C.........-------------------  294
                                      S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                    
D  100.0% (8/8)     IGHD3-10*01  13   -----------------------------------------------------------------------------........-----  20
J  95.9% (47/49)    IGHJ5*02     3    --------------------------------------------------------------------------------------....  6

                                      ---------->                                  
                                      W  F  G  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_350    271  GGTTCGGCCCCTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  315
J  95.9% (47/49)    IGHJ5*02     7    ......A...........A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_197656

Length=318
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           307     1e-85
IGHD4-17*01                                                                                           16.1    2.0  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCG	ACGGTGAC	ACCGAGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACGGTGACACCGAGAATGACTAC	AADGDTENDY	230	259	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	232	3	3	0	0	100
Total	N/A	N/A	220	208	12	0	94.5


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  L  T  F  S  S  F  G  M  H  W  V  R  Q  P  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_351    13   GTCTGGACTCACCTTCAGTAGCTTTGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  94.5% (208/220)  IGHV3-33*01  72   .......T...............A......................G...........................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  K  K  Y  Y  T  D  S  V  K  G  R  F  I  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_351    103  TGGAAGTAAGAAATACTATACAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCAAGAACACGTTGTATCTGCAGATGAA  192
V  94.5% (208/220)  IGHV3-33*01  162  .........T.........G........................C............................C..........A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------CDR3-IMGT--------->                       
                                        S  L  R  V  D  D  T  A  V  Y  F  C  A  A  D  G  D  T  E  N  D  Y  W  G  Q  G  T  L  V  T
                    Query_351    193  CAGCCTGAGAGTCGACGACACGGCTGTCTATTTCTGTGCGGCCGACGGTGACACCGAGAATGACTACTGGGGCCAGGGAACCCTGGTCAC  282
V  94.5% (208/220)  IGHV3-33*01  252  ...........C...G...........G....A.......--------------------------------------------------  291
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                   
D  100.0% (8/8)     IGHD4-17*01  6    --------------------------------------------........--------------------------------------  13
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------------------------..............................  37

                                                 
                                        V  S  S  
                    Query_351    283  CGTCTCCTCAG  293
J  100.0% (41/41)   IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30726981


Query= Query_144123

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           321     7e-90
IGHD3-16*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCTGCGGACTGG	GATTACG	GTT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCTGCGGACTGGGATTACGGTTACTGGTTTGACCAC	AKAADWDYGYWFDH	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_352    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCGCCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.5% (226/247)  IGHV3-23*01  47   ............................................AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  G  S  H  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_352    91   AGTGGGTCTCAGGTATTAGTGGTGGTTCTCATAATACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.5% (226/247)  IGHV3-23*01  137  ............C..........A..GG.GG..GC.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  L  R  M  N  N  L  R  A  E  D  A  A  L  Y  Y  C  A  K  A  A  D  W  D  Y  G  
                    Query_352    181  AGAACACGCTCTCTCTGCGCATGAACAATCTCAGAGCCGAGGACGCGGCCCTATACTACTGTGCGAAGGCTGCGGACTGGGATTACGGTT  270
V  91.5% (226/247)  IGHV3-23*01  227  ..........G.A.....AA.......GC..G............A.....G....T...........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  8    --------------------------------------------------------------------------------.......---  14

                                      ------------->                                  
                                      Y  W  F  D  H  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_352    271  ACTGGTTTGACCACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  93.8% (45/48)    IGHJ5*02     4    .......C....C..............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_273468

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           327     9e-92
IGHD5-12*01                                                                                           12.2    32   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GTCGAGGGGGT	CGATTA	GGGAAAAAAGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTCGAGGGGGTCGATTAGGGAAAAAAGTTTTGACCAC	AKSRGSIREKSFDH	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	228	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  N  N  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_353    1    GGTCCCTGAGACTCTCCTGTGCAACGTCTGGATTCACCTTTAACAACTTTGCCATGAGCTGGGTCCGACAGGCTCCAGGGAAGGGGCTGG  90
V  92.3% (228/247)  IGHV3-23*01  47   .......................G.C................G..G..A..................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  F  S  P  S  G  R  T  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  
                    Query_353    91   AGTGGGTCTCATATTTTAGTCCAAGTGGTCGTACCACATCCTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACATTTCCA  180
V  92.3% (228/247)  IGHV3-23*01  137  ...........GC.A.....GGT......G...G.....A............................................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  T  L  T  A  E  D  T  A  V  Y  Y  C  A  K  S  R  G  S  I  R  E  
                    Query_353    181  AGAACACACTGTATCTGCAAATGAACACCCTGACAGCCGAGGACACGGCCGTATATTACTGTGCGAAGTCGAGGGGGTCGATTAGGGAAA  270
V  92.3% (228/247)  IGHV3-23*01  227  .......G...................G.....G.................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD5-12*01  17   ------------------------------------------------------------------------------......------  22

                                      ------------->                                  
                                      K  S  F  D  H  W  G  P  G  T  L  V  T  V  S  S  
                    Query_353    271  AAAGTTTTGACCACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  318
J  95.3% (41/43)    IGHJ4*02     6    -----......T.........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_197653

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD6-19*01                                                                                           12.2    31    
IGHJ5*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGCG	GGCTGG	G	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCTGGGAACTGGTTCGACCCC	ARGRRAGNWFDP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_354    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  G  D  A  S 
                    Query_354    91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGGAGACGCCTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ...............T......A...........................................G............T....A.G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       T  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  W 
                    Query_354    181  ACGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCTGGGAACTGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .A.................A.................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------......-------  18
J  93.9% (46/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  D  P  W  G  H  G  I  L  V  T  V  T  S  
                    Query_354    271  TTCGACCCCTGGGGCCACGGAATCCTGGTCACCGTCACCTCAG  313
J  93.9% (46/49)    IGHJ5*02     9    .................G....C.............T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_304438

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           271     7e-75
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCT	TTCGGGGGGTT	CGATCTTCGGATTCACTCTTATACAGGGATATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTTCGGGGGGTTCGATCTTCGGATTCACTCTTATACAGGGATATTATGGTATGGATGTC	ARDLSGGSIFGFTLIQGYYGMDV	230	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	48	3	0	94.1
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	98	16	0	86
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	199	26	0	88.4


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  N  F  G  S  Y  V  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  R  Y  D
                    Query_355    13   GTCTGGATTCAATTTCGGAAGCTATGTCATGCACTGGGTCCGCCAGGCTCCAGGCAAAGGGCTGGAGTGGGTGGCAAATATACGGTATGA  102
V  88.4% (199/225)  IGHV3-33*01  72   ...........CC...A.T.......G..............................G..................GT....T.......  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  E  K  Y  A  D  S  V  K  G  *  F  T  I  S  R  E  N  S  K  N  M  L  Y  I  Q  M  N
                    Query_355    103  TGGAAGTAATGAAAAATATGCAGACTCCGTGAAGGGCTGATTTACTATCTCCAGAGAGAATTCCAAGAACATGCTTTATATACAGATGAA  192
V  88.4% (199/225)  IGHV3-33*01  162  ..........A..T.C.....................C....C..C...........C.............C...G...C.G..A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------------------CDR3-IMGT--------------
                                        S  L  R  T  E  D  S  G  I  Y  Y  C  A  R  D  L  S  G  G  S  I  F  G  F  T  L  I  Q  G  Y
                    Query_355    193  CAGCCTGAGAACCGAGGACTCGGGTATATATTACTGTGCGAGAGATCTTTCGGGGGGTTCGATCTTCGGATTCACTCTTATACAGGGATA  282
V  88.4% (199/225)  IGHV3-33*01  252  ..........G........A...C.G.G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  90.9% (10/11)    IGHD3-10*01  13   ------------------------------------------------.......A...-------------------------------  23

                                      --------------->                                 
                                        Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_355    283  TTATGGTATGGATGTCTGGGGCCAGGGGACCACGGTCACCGTCTCCTCA  331
J  95.6% (43/45)    IGHJ6*02     18   ----........C...........A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_273465

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAA	ACGAAT	TATGAAAGTA	CTGCGGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAACGAATTATGAAAGTACTGCGGGGCTTGACTTC	AKTNYESTAGLDF	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_356    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGCAGCTATGGCATGAGCTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  93.1% (231/248)  IGHV3-23*01  47   ....................................C..............C.....................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  I  N  G  I  G  S  S  T  H  Y  A  G  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_356    91   AGTGGGTCTCACTTATTAATGGTATCGGAAGTAGCACGCACTACGCAGGCTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCA  180
V  93.1% (231/248)  IGHV3-23*01  137  ...........GC.....G.....GT..TG.......AT.........A...............G......A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  T  N  Y  E  S  T  A  
                    Query_356    181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTATATTACTGTGCAAAAACGAATTATGAAAGTACTGCGG  270
V  93.1% (231/248)  IGHV3-23*01  227  ....................................C...........................G...----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (9/10)     IGHD3-22*01  8    --------------------------------------------------------------------------.....T....------  17

                                      ---------->                                  
                                      G  L  D  F  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_356    271  GGCTTGACTTCTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  315
J  95.2% (40/42)    IGHJ4*02     7    ---......A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_273464

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            358     4e-101
IGHD3-3*01                                                                                            21.8    0.043 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD3-3*01	IGHJ4*02	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCAG	CGACGAT	TTTTTTGAGTGCTTATT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGCAGCGACGATTTTTTTGAGTGCTTATTACTACTTTGATTAC	ARSDDFFECLLLL*L	264	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	50	45	41	4	0	91.1
CDR1-IMGT	51	77	30	27	0	3	90
FR2-IMGT	78	128	51	49	2	0	96.1
CDR2-IMGT	129	149	21	21	0	0	100
FR3-IMGT	150	263	114	106	8	0	93
CDR3-IMGT (germline)	264	271	8	7	1	0	87.5
Total	N/A	N/A	269	251	15	3	93.3


Alignments

                                     <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                      L  V  K  P  S  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S     S  G  V  G  V  G  W  I  R 
                    Query_357   6    CTGGTGAAGCCCTCGCAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCAG---TAGTGGAGTGGGTGTGGGCTGGATCCGT  92
V  93.3% (251/269)  IGHV2-5*01  31   ........A...A.A...........G................................CAC............................  120
                                      L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R 

                                     ------FR2-IMGT---------------------><-----CDR2-IMGT-----><--------------------------------
                                      Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  H  Y  S  P  S  L  E  S  R  L  S 
                    Query_357   93   CAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCTCTCATTTATTGGAATGATGATAAGCACTACAGCCCATCTCTGGAGAGCAGGCTCTCC  182
V  93.3% (251/269)  IGHV2-5*01  121  ...........A....................A.........................G................A...........A..  210
                                      Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T 

                                     --------------------FR3-IMGT----------------------------------------------------><--------
                                      I  T  K  G  T  S  K  N  Q  V  V  L  T  M  T  K  M  D  P  V  D  T  S  T  C  Y  C  A  R  S 
                    Query_357   183  ATCACCAAGGGCACCTCCAAAAACCAGGTGGTCCTTACAATGACCAAGATGGACCCTGTGGACACATCCACATGTTACTGCGCACGCAGC  272
V  93.3% (251/269)  IGHV2-5*01  211  ..........A....................................C..................G......A......T....A...-  299
                                      I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H    

                                     ----------CDR3-IMGT----------------->                                  
                                      D  D  F  F  E  C  L  L  L  L  *  L  L  G  P  G  D  P  G  H  R  L  L   
                    Query_357   273  GACGATTTTTTTGAGTGCTTATTACTACTTTGATTACTGGGGCCAGGGGACCCAGGTCACCGTCTCCTCAG  343
D  88.2% (15/17)    IGHD3-3*01  10   ------.....G.....G.....------------------------------------------------  26
J  93.8% (45/48)    IGHJ4*02    1    -----------------------..........C..............A....T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_304435

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_358    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_358    91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_358    181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_358    271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_304433

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD3-16*02                                                                                           39.1    3e-07
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	CCAGGCCGG	TTACGTTTGGGGGCGTTATCGTT	TTTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCCAGGCCGGTTACGTTTGGGGGCGTTATCGTTTTTCCTACTTTGACTCC	ARGQAGYVWGRYRFSYFDS	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_359    1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCATTCAGTGATTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGTCTGGAA  90
V  94.7% (232/245)  IGHV4-34*01  49   ...................................C.......G...........G...........................G.....G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  K  H  S  G  S  T  Y  S  N  P  S  L  K  S  R  V  T  T  S  V  D  T  S  K  N 
                    Query_359    91   TGGATTGGGGAAATCAAGCATAGTGGAAGCACCTACTCCAACCCGTCCCTCAAGAGTCGAGTCACCACATCAGTAGACACGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-34*01  139  .................T...............A...A.............................T......................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       R  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  Q  A  G  Y  V  W  G  R 
                    Query_359    181  CGGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGCGAGGCCAGGCCGGTTACGTTTGGGGGCGT  270
V  94.7% (232/245)  IGHV4-34*01  229  .A...........A......C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  95.7% (22/23)    IGHD3-16*02  10   --------------------------------------------------------------------------.............A..  25

                                      ----------------------->                                  
                                       Y  R  F  S  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_359    271  TATCGTTTTTCCTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.7% (22/23)    IGHD3-16*02  26   .......---------------------------------------------------  32
J  97.9% (46/47)    IGHJ4*02     2    -----------...........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_273460

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            18.0    0.59 
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCTTCCCC	GGAATGGTTATT	GTTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTTCCCCGGAATGGTTATTGTTCACTACGCAATGGACGTC	ARGLFPGMVIVHYAMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  Y  Y  M  A  W  I  R  Q  A  P  G  K  G  L  
                    Query_360    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTGACTACTACATGGCCTGGATCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-11*01  47   ....................................C...................AG.........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  V  S  S  T  V  Y  H  A  E  S  V  K  D  R  F  T  I  S  R  D  N  A  
                    Query_360    91   AGTGGGTTTCATATATTAGTAGTGTCAGTAGTACCGTATATCACGCAGAGTCTGTGAAGGACCGATTCACCATCTCCAGGGACAACGCCA  180
V  92.4% (230/249)  IGHV3-11*01  137  .............C.........AGTG........A....CT.......C..........G.............................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  F  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  L  F  P  G  M  V  
                    Query_360    181  AAAACTCACTGTTTCTTCAAATGAACAACCTGAGAGCCGAAGACACGGCCGTGTATTACTGTGCGAGAGGCCTCTTCCCCGGAATGGTTA  270
V  92.4% (230/249)  IGHV3-11*01  227  .G..........A...G..........G............G............................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD3-3*01   15   --------------------------------------------------------------------------------...G......  24

                                      GT-------------------->                                 
                                      I  V  H  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_360    271  TTGTTCACTACGCAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
D  91.7% (11/12)    IGHD3-3*01   25   ..------------------------------------------------------  26
J  96.0% (48/50)    IGHJ6*02     13   ------......GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_144129

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           366     2e-103
IGHD5-18*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTGAGTGGACGAG	GCTATGG	CCCCCCAAAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTGAGTGGACGAGGCTATGGCCCCCCAAATTACTTTGACTAC	ARGLSGRGYGPPNYFDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	262	28	0	90.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  R  G  T  F  G  N  Y
                    Query_361    1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTAGAGGCACATTCGGCAACTA  90
V  90.3% (262/290)  IGHV1-69*01  6    ..................G...................................................G.......C...A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  N  W  L  R  Q  A  P  G  Q  G  L  E  W  M  G  E  I  I  P  V  F  A  T  S  N  Y  A  Q
                    Query_361    91   TGCAATCAACTGGCTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGAGAAATCATCCCTGTCTTTGCAACATCAAATTACGCACA  180
V  90.3% (262/290)  IGHV1-69*01  96   ...T....G....G...................A...................GG.........A......GT...G....C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  L  T  A  D  E  S  T  N  L  A  Y  M  E  L  S  T  L  R  S  E  D  T  A
                    Query_361    181  AAAGTTCCAGGGCAGAGTCACTCTCACCGCGGACGAATCCACGAACTTAGCCTACATGGAACTGAGTACCCTGAGATCTGAAGACACGGC  270
V  90.3% (262/290)  IGHV1-69*01  186  G....................GA.T...................G.AC............G.....C.G............G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  G  L  S  G  R  G  Y  G  P  P  N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_361    271  CGTTTATTACTGTGCGAGAGGCCTGAGTGGACGAGGCTATGGCCCCCCAAATTACTTTGACTACTGGGGCCAGGGAACACTGGTCACCGT  360
V  90.3% (262/290)  IGHV1-69*01  276  ...G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD5-18*01  10   -----------------------------------.......------------------------------------------------  16
J  97.8% (45/46)    IGHJ4*02     3    ----------------------------------------------------..........................C...........  40

                                              
                                        S  S  
                    Query_361    361  CTCCTCAG  368
J  97.8% (45/46)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_144128

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         329     3e-92
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	C	TTACTATGATAGTAG	CGGCTCTTCCCTCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGCTTACTATGATAGTAGCGGCTCTTCCCTCAACTACTTTGACCAC	ARAYYDSSGSSLNYFDH	250	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	63	36	28	2	6	77.8
FR2-IMGT	64	114	51	49	2	0	96.1
CDR2-IMGT	115	135	21	20	1	0	95.2
FR3-IMGT	136	249	114	105	9	0	92.1
CDR3-IMGT (germline)	250	256	7	7	0	0	100
Total	N/A	N/A	256	235	15	6	91.8


Alignments

                                        <--------FR1-IMGT---------><-------------CDR1-IMGT------------><--------------------FR2-IM
                                         T  L  S  L  T  C  A  V  S  F  S  R  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G 
                    Query_362      1    ACCCTGTCCCTCACCTGCGCTGTCTCTTTCTCTCGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGG  90
V  91.8% (235/256)  IGHV4-30-4*01  49   ..................A........G------.....................A..................................  132
                                         T  L  S  L  T  C  T  V  S        G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G 

                                        GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                         K  G  L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  F  N  P  S  L  K  R  R  L  T  M  S  V  D 
                    Query_362      91   AAGGGCCTTGAGTGGATTGGGAACATCTATTACAGTGGGAGCACGTACTTCAACCCGTCCCTCAAGAGGCGACTTACCATGTCAGTGGAC  180
V  91.8% (235/256)  IGHV4-30-4*01  133  ........G............T......................C....A..................T...G.......A.....A...  222
                                         K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                        --------FR3-IMGT----------------------------------------------------><--------------------
                                         K  S  K  N  Q  F  S  L  H  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  Y  Y  D  S 
                    Query_362      181  AAGTCCAAGAACCAGTTCTCCCTGCACCTGAGCTCTGTGACTGCCGCTGACACGGCCGTGTATTACTGTGCCAGAGCTTACTATGATAGT  270
V  91.8% (235/256)  IGHV4-30-4*01  223  .C......................A.G....................A............................--------------  298
                                         T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  100.0% (15/15)   IGHD3-22*01    4    -----------------------------------------------------------------------------.............  16

                                        CDR3-IMGT-------------------->                                 
                                         S  G  S  S  L  N  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_362      271  AGCGGCTCTTCCCTCAACTACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  333
D  100.0% (15/15)   IGHD3-22*01    17   ..-------------------------------------------------------------  18
J  97.9% (46/47)    IGHJ4*02       1    ----------------...........T...................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_326741

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           324     8e-91
IGHD1-26*01                                                                                           18.0    0.58 
IGHJ1*01                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGTCAGAATGG	GGTATGATGGGAGCCACT	GGCT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGTCAGAATGGGGTATGATGGGAGCCACTGGCTAC	AKGSEWGMMGATGY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  H  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_363    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTTCACAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-23*01  47   ....................................CC...AG...C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  D  I  S  G  S  G  S  N  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_363    91   AGTGGGTCTCAGATATCAGTGGTAGTGGTAGTAATACATACTACGCAGACTCCGTGAGGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.6% (228/249)  IGHV3-23*01  137  ............C...T............G...GC......................A................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  N  T  L  Y  L  Q  M  N  R  M  R  V  E  D  T  A  V  Y  Y  C  A  K  G  S  E  W  G  M  M  
                    Query_363    181  GGAATACGTTGTATTTGCAGATGAACAGAATGAGAGTCGAGGACACGGCCGTTTATTATTGTGCGAAAGGGTCAGAATGGGGTATGATGG  270
V  91.6% (228/249)  IGHV3-23*01  227  A...C...C.....C....A........CC......C...............A.....C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  83.3% (15/18)    IGHD1-26*01  1    --------------------------------------------------------------------------------.....AG...  10

                                      ------------->                                  
                                      G  A  T  G  Y  W  G  Q  G  T  Q  V  T  V  S  A  
                    Query_363    271  GAGCCACTGGCTACTGGGGCCAGGGCACCCAAGTCACCGTCTCCGCAG  318
D  83.3% (15/18)    IGHD1-26*01  11   ....T...----------------------------------------  18
J  91.7% (33/36)    IGHJ1*01     17   ------------..................TG............T...  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_231155

Length=418
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           389     2e-110
IGHD3-3*01                                                                                            46.8    1e-09 
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGAGCTTGAC	TTACGATTTTTGGAGTGGTTATTA	CCCGACC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGAGCTTGACTTACGATTTTTGGAGTGGTTATTACCCGACCACTACTACTACGCTATGGACGTC	ARGELDLRFLEWLLPDHYYYAMDV	290	361	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	76	69	69	0	0	100
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	19	5	0	79.2
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  T  H 
                    Query_364    8    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTTCCACTCAC  97
V  93.1% (269/289)  IGHV1-18*04  7    .................................................................................A...GCT..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  K  K  S  I  T  K  Y  A  Q 
                    Query_364    98   GGTATTAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGCTAAGAAAAGTATCACAAAGTATGCACAG  187
V  93.1% (269/289)  IGHV1-18*04  97   .....C.............................G...........................T.C..TG...A......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  R  D  R  V  T  M  T  T  D  T  S  T  T  T  V  Y  M  E  L  R  S  L  R  S  D  D  A  A 
                    Query_364    188  AAGTTCCGAGACAGAGTCACCATGACCACAGACACATCCACGACCACAGTCTACATGGAACTGAGGAGCCTGAGATCTGACGACGCGGCC  277
V  93.1% (269/289)  IGHV1-18*04  187  ...C...AG.G................................G.....C.........G........................A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------------CDR3-IMGT------------------------------>      
                                       V  Y  Y  C  A  R  G  E  L  D  L  R  F  L  E  W  L  L  P  D  H  Y  Y  Y  A  M  D  V  W  G 
                    Query_364    278  GTGTATTACTGTGCGAGAGGGGAGCTTGACTTACGATTTTTGGAGTGGTTATTACCCGACCACTACTACTACGCTATGGACGTCTGGGGC  367
V  93.1% (269/289)  IGHV1-18*04  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (24/24)   IGHD3-3*01   4    ------------------------------........................------------------------------------  27
J  98.2% (55/56)    IGHJ6*02     7    -------------------------------------------------------------............G................  35

                                                                 
                                       Q  G  T  T  V  T  V  S  S 
                    Query_364    368  CAAGGGACCACGGTCACCGTCTCCTCA  394
J  98.2% (55/56)    IGHJ6*02     36   ...........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41024880


Query= Query_61787

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           388     5e-110
IGHD3-3*01                                                                                            31.5    6e-05 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGCC	TACGAGTTTTGGAGTGGTT	CTTGTGTA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGCCTACGAGTTTTGGAGTGGTTCTTGTGTATACTACGATATGGACGTC	ARAAYEFWSGSCVYYDMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  T  F  V  S  Y
                    Query_365    1    GCAGCTGGTGCAGTCTGGGGCCGAAGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCGTCAGTTA  90
V  92.8% (269/290)  IGHV1-69*01  6    .....................T..G.................................................G.......AG...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  V  S  W  V  R  L  A  P  G  Q  G  L  E  W  M  G  *  I  I  P  I  L  G  A  P  N  Y  A  Q
                    Query_365    91   TGGTGTCAGCTGGGTGCGACTGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGAATCATCCCTATCTTAGGTGCCCCAAACTACGCACA  180
V  92.8% (269/290)  IGHV1-69*01  96   ..C.A...............A...............................G.G..............T...A.AG.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  P  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  T  E  D  T  A
                    Query_365    181  GAAGTTCCAGGGCAGAGTCCCGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTCAGAACTGAGGACACGGC  270
V  92.8% (269/290)  IGHV1-69*01  186  ...................A....................................................G...T.............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        F  Y  C  C  A  R  A  A  Y  E  F  W  S  G  S  C  V  Y  Y  D  M  D  V  W  G  Q  G  T  S  V
                    Query_365    271  CTTTTATTGCTGTGCGAGAGCCGCCTACGAGTTTTGGAGTGGTTCTTGTGTATACTACGATATGGACGTCTGGGGCCAAGGGACCTCGGT  360
V  92.8% (269/290)  IGHV1-69*01  276  .G.G....A...........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-3*01   5    -------------------------.....T.............----------------------------------------------  23
J  96.1% (49/51)    IGHJ6*02     12   ----------------------------------------------------.......G.........................A....  49

                                                   
                                        T  V  S  S 
                    Query_365    361  CACCGTCTCCTCA  373
J  96.1% (49/51)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_82888

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           258     4e-71
IGHD2-15*01                                                                                           10.3    119  
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	ACATAATCCT	GCTGC	CAGAGGGGC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGACATAATCCTGCTGCCAGAGGGGCCAACTGGTTCGACCTC	ARGHNPAARGANWFDL	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	48	24	19	2	3	79.2
FR2-IMGT	49	99	51	45	6	0	88.2
CDR2-IMGT	100	120	21	18	3	0	85.7
FR3-IMGT	121	234	114	94	20	0	82.5
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	245	207	35	3	84.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  D  F  Y  G  G  S  F     D  S  Y  W  N  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_366    1    ACCCTGTCCCTCACCTGCGATTTTTATGGTGGGTCCTT---TGATTCCTACTGGAATTGGATCCGCCAGACTCCAGGGAAGGGGCTGGAG  87
V  84.5% (207/245)  IGHV4-34*01  49   ...................C.G.C..............CAG..G..A........GC............C.C..................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  N  R  A  G  S  T  N  F  N  P  S  L  E  S  R  L  T  I  S  V  D  T  S  T  K 
                    Query_366    88   TGGATTGCAGAAATCAATCGTGCTGGAAGCACCAACTTCAATCCGTCCCTCGAGAGTCGACTCACCATTTCAGTGGACACGTCCACGAAG  177
V  84.5% (207/245)  IGHV4-34*01  139  .......GG..........A.AG..............A...C.........A........G.......A.....A..........A...C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       R  F  S  L  R  L  N  S  L  N  V  A  D  T  G  V  Y  Y  C  A  R  G  H  N  P  A  A  R  G  A 
                    Query_366    178  CGATTCTCCCTGAGGCTAAATTCTCTTAACGTCGCAGACACGGGTGTGTATTACTGTGCGCGAGGACATAATCCTGCTGCCAGAGGGGCC  267
V  84.5% (207/245)  IGHV4-34*01  229  .AG..........A...G.GC...G.G.C..C...G.......C................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (5/5)     IGHD2-15*01  21   ---------------------------------------------------------------------------.....----------  25
J  96.0% (48/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  D  L  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_366    268  AACTGGTTCGACCTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  316
J  96.0% (48/50)    IGHJ5*02     3    .............C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_139840

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           344     6e-97
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CT	ACTGGGGA	TTTGGAA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTACTGGGGATTTGGAATACTTTGACTCC	ATTGDLEYFDS	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  R  S  Y  T  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_367    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCGTTTCAGAAGCTATACCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.7% (233/246)  IGHV3-21*01  47   ...................................ACC.....T.......G.....A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  M  K  G  R  F  S  I  T  R  D  N  A  
                    Query_367    91   AGTGGGTCTCATCCATTAGTAGTAGCAGTAGTTACATATACTACGCAGACTCAATGAAGGGCCGATTCTCCATCACCAGAGACAACGCCA  180
V  94.7% (233/246)  IGHV3-21*01  137  .........................T...........................G..............A.....T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  T  T  G  D  L  E  Y  F  
                    Query_367    181  AGAACTCACTCTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGACTACTGGGGATTTGGAATACTTTG  270
V  94.7% (233/246)  IGHV3-21*01  227  ..........G.............................G...........G.............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD7-27*01  4    --------------------------------------------------------------------........--------------  11
J  95.7% (44/46)    IGHJ4*02     3    -----------------------------------------------------------------------------------.......  9

                                      ---->                                  
                                      D  S  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_367    271  ACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  309
J  95.7% (44/46)    IGHJ4*02     10   ...A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_336979

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           343     2e-96
IGHD2-15*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CCTCTGGTT	TTGTAGTGGTGCTAACTGCTACTC	GGACG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCCTCTGGTTTTGTAGTGGTGCTAACTGCTACTCGGACGACTTTGACTAC	ALWFCSGANCYSDDFDY	252	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	38	38	29	0	9	76.3
CDR1-IMGT	39	62	24	23	1	0	95.8
FR2-IMGT	63	113	51	50	1	0	98
CDR2-IMGT	114	137	24	20	4	0	83.3
FR3-IMGT	138	251	114	114	0	0	100
CDR3-IMGT (germline)	252	253	2	2	0	0	100
Total	N/A	N/A	253	238	6	9	94.1


Alignments

                                      <--------------FR1-IMGT--------------><-------CDR1-IMGT------><--------------------FR2-IMG
                                         S  L  R  L  S  C  A  A  S  G  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  
                    Query_368    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGA  90
V  94.1% (238/253)  IGHV3-21*01  47   ..........................---------....................C..................................  127
                                         S  L  R  L  S  C  A  A           S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  

                                      T---------------------><-------CDR2-IMGT------><------------------------------------------
                                      K  G  L  E  W  V  S  Y  S  S  S  S  S  R  S  V  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  
                    Query_368    91   AGGGGCTGGAGTGGGTCTCATACAGTAGTAGTAGTAGTCGTTCCGTATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAG  180
V  94.1% (238/253)  IGHV3-21*01  128  .....................C..T.............A...A.A.............................................  217
                                      K  G  L  E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  

                                      ----------FR3-IMGT----------------------------------------------------><------------------
                                      D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  L  W  F  C  S  
                    Query_368    181  ACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCCCTCTGGTTTTGTAGTG  270
V  94.1% (238/253)  IGHV3-21*01  218  .........................................................................-----------------  290
                                      D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                 
D  91.7% (22/24)    IGHD2-15*01  7    ----------------------------------------------------------------------------------........  14

                                      --CDR3-IMGT-------------------->                                  
                                      G  A  N  C  Y  S  D  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_368    271  GTGCTAACTGCTACTCGGACGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  91.7% (22/24)    IGHD2-15*01  15   ...G..G.........--------------------------------------------------  30
J  100.0% (45/45)   IGHJ4*02     4    ---------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_336978

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           346     2e-97
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGGAGAAG	ACGATTTTTGGAGTGG	N/A	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGGAGAAGACGATTTTTGGAGTGGTTACTTCTACCTCCACGGGATGCACGTC	ARVGEDDFWSGYFYLHGMHV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  A  F  A  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_369    1    GGTCCCTGAGACTCTCCTGTTCAGCGTCTGGATTCGCCTTCGCTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-33*01  47   ....................G..............A.....AG...C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  T  T  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_369    91   AGTGGGTGGCAGTTATTTGGTATGATGGAACTACTAAGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCC  180
V  94.4% (235/249)  IGHV3-33*01  137  ................A.............G..A...A...................................................A  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      Q  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  E  D  D  F  W  
                    Query_369    181  AGAACACGTTGTATCTGCAAATGAACAGCCTGCGAGCCGAAGACACGGCTGTCTATTACTGTGCGAGAGTCGGAGAAGACGATTTTTGGA  270
V  94.4% (235/249)  IGHV3-33*01  227  ........C.......................A.......G...........G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (16/16)   IGHD3-3*01   6    ------------------------------------------------------------------------------............  17

                                      R3-IMGT------------------------>                                 
                                      S  G  Y  F  Y  L  H  G  M  H  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_369    271  GTGGTTACTTCTACCTCCACGGGATGCACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  100.0% (16/16)   IGHD3-3*01   18   ....-------------------------------------------------------------  21
J  90.2% (55/61)    IGHJ6*02     2    ----.....A....TA.T....T...G......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_336977

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           385     4e-109
IGHD1-1*01                                                                                            10.3    116   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TA	GAACG	GCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATAGAACGGCATTTGACTAC	TRDRTAFDY	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	30	0	0	100
FR3-IMGT	135	248	114	113	1	0	99.1
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	251	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  G  D  Y  G  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_370    1    GGTCCCTGAGACTCTCCTGTTCAGCTTCTGGATTCACCTTTGGTGATTATGGTCTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (251/256)  IGHV3-49*04  47   ....................A..............................C.A...G................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_370    91   AGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  98.0% (251/256)  IGHV3-49*04  137  ..........................................................................................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  T  R  D  R  T  A  F  
                    Query_370    181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAAGCGAGGACACAGCCGTGTATTACTGTACTAGAGATAGAACGGCATTTG  270
V  98.0% (251/256)  IGHV3-49*04  227  ..........................................C.................................--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (5/5)     IGHD1-1*01   11   ------------------------------------------------------------------------------.....-------  15
J  100.0% (43/43)   IGHJ4*02     6    --------------------------------------------------------------------------------------....  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_370    271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (43/43)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_82881

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTGGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTGGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSGGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_371    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_371    91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  G  
                    Query_371    181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTGGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD3-22*01  11   --------------------------------------------------------------------------------......A...  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_371    271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  93.3% (14/15)    IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_336975

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           282     4e-78
IGHD3-16*01                                                                                           18.0    0.61 
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACAACG	TATGCTTAT	GTCAGTGCTTGGGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAACGTATGCTTATGTCAGTGCTTGGGGATGATGCTTTTGATGTC	ARRQRMLMSVLGDDAFDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  V  T  T  T  R  Y  S  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_372    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCGTCACCACTACTAGATACTCCTGGGGTTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  86.0% (215/250)  IGHV4-39*01  49   ...............................G....A...G..G..G...T....A......C..........................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Q  M  F  Y  G  G  S  T  Y  Q  N  P  S  L  N  S  R  V  T  V  S  V  D  P  S 
                    Query_372    91   CTGGAATGGATTGGGCAGATGTTCTATGGTGGGAGCACGTACCAGAACCCGTCGCTGAATAGTCGAGTCACCGTGTCCGTTGACCCGTCC  180
V  86.0% (215/250)  IGHV4-39*01  139  .....G.........AGT..C.AT...A..........C...T.C........C..C..G............A.A.....A...A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  S  Q  F  F  L  N  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  R  Q  R  M  L  M  S 
                    Query_372    181  AAGAGTCAGTTCTTCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCTGTATATTATTGTGCGAGACGACAACGTATGCTTATGTCA  270
V  86.0% (215/250)  IGHV4-39*01  229  ....AC.......C......G....G...................A.......G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  26   -----------------------------------------------------------------------------.........----  34

                                      -IMGT--------------------->                                  
                                       V  L  G  D  D  A  F  D  V  W  G  Q  G  T  G  V  T  V  S  S  
                    Query_372    271  GTGCTTGGGGATGATGCTTTTGATGTCTGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  331
J  96.0% (48/50)    IGHJ3*01     1    -----------...............................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_336974

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     8e-92
IGHD3-3*01                                                                                            27.6    7e-04
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	TTGGAGTGGTTATT	TATA	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATTGGAGTGGTTATTTATAGACTTC	ARELEWLFIDF	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_373    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_373    91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  E  L  E  W  L  F  I  D  F 
                    Query_373    181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGAATTGGAGTGGTTATTTATAGACTTC  270
V  92.7% (227/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (14/14)   IGHD3-3*01   13   ------------------------------------------------------------------..............----------  26
J  95.0% (38/40)    IGHJ4*02     9    ------------------------------------------------------------------------------------....A.  14

                                                                        
                                       W  G  Q  G  T  L  V  A  V  S  S  
                    Query_373    271  TGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  304
J  95.0% (38/40)    IGHJ4*02     15   .....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_336973

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_374    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  95.8% (277/289)  IGHV5-51*03  6    ...............................A..............................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  G  P
                    Query_374    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACGGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   ...................................................G............................G....A....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  V  N  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_374    181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCGTCAATACCGCCTACCTGCAGTGGAGTAGCCTGCAGGCCTCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  ........................................A...GC....................C......A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_374    271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGTCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.8% (277/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    ------------------------------------------............C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_336972

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           350     8e-99
IGHD3-10*01                                                                                           14.1    8.8  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAAGAATTGAGGTGACGGCGCTTTCGGC	TTCGGGG	CTGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAAGAATTGAGGTGACGGCGCTTTCGGCTTCGGGGCTGATTTTTGACCGC	ARGRIEVTALSASGLIFDR	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  G  D  Y  F  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_375    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACCAGTGGTGATTACTTCTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*01  49   ........................................G........G.....A.....G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  N  S  G  N  T  Y  Y  N  P  S  L  K  S  L  V  T  M  S  V  D  T  S 
                    Query_375    91   CTGGAGTGGATTGGGTACATCTCTAACAGTGGGAACACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATGTCAGTGGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*01  139  ......................A.T.........G.......................................A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  R  S  M  T  A  A  N  T  A  V  Y  Y  C  A  R  G  R  I  E  V  T  A 
                    Query_375    181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTATGACTGCCGCGAACACGGCCGTGTATTATTGTGCGAGAGGAAGAATTGAGGTGACGGCG  270
V  94.8% (237/250)  IGHV4-31*01  229  ..........................C...G...........G................C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       L  S  A  S  G  L  I  F  D  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_375    271  CTTTCGGCTTCGGGGCTGATTTTTGACCGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  100.0% (7/7)     IGHD3-10*01  13   --------.......-------------------------------------------------  19
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_336970

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD1-1*01                                                                                            14.1    9.4   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAGGGGG	CAACTGG	GACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTAC	ARGGGNWDPFDY	292	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	46	5	0	90.2
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	106	8	0	93
CDR3-IMGT (germline)	292	296	5	5	0	0	100
Total	N/A	N/A	292	271	21	0	92.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_376    5    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCG  94
V  92.8% (271/292)  IGHV5-51*01  2    ..G..................................................................G............C......A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      A  Y  W  I  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  V  V  Y  P  D  D  S  D  A  R  Y  
                    Query_376    95   CCTACTGGATCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGGTCGTCTATCCTGATGACTCTGATGCCAGGTACA  184
V  92.8% (271/292)  IGHV5-51*01  92   G.....................C..G.........A..........G.........A..A.........G..........A....A....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  H  I  T  I  S  A  D  K  S  L  S  T  A  F  L  Q  W  N  S  L  K  A  S  D  
                    Query_376    185  GCCCGTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCCTCAGCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACA  274
V  92.8% (271/292)  IGHV5-51*01  182  ...........C.......GG.......................A............A...........G....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  I  Y  Y  C  A  R  G  G  G  N  W  D  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_376    275  CCGCCATCTATTACTGTGCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  361
V  92.8% (271/292)  IGHV5-51*01  272  .......G..............-----------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    -------------------------------.......-------------------------------------------------  11
J  100.0% (44/44)   IGHJ4*02     5    -------------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_72388

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           347     7e-98
IGHD2-8*02                                                                                            16.1    2.1  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD2-8*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAC	TACTGGCGGTG	AA	GATAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTACTACTGGCGGTGAAGATATC	ARSTTGGEDI	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  F  Y  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_377    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTTCTACATGACCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-11*06  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  S  S  R  S  G  H  S  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_377    91   AATGGGTTTCATTCATTAGTAGTAGAAGTGGTCACTCAAACTACGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  94.8% (235/248)  IGHV3-11*06  137  .G..........A............T...A..T..A...................................A..................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      R  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  S  T  T  G  G  E  D  
                    Query_377    181  GGAACTCACTGTTTTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAAGTACTACTGGCGGTGAAGATA  270
V  94.8% (235/248)  IGHV3-11*06  227  A...........A.C...................................G.................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD2-8*02   10   -------------------------------------------------------------------------......T....------  20
J  100.0% (38/38)   IGHJ3*02     11   --------------------------------------------------------------------------------------....  14

                                      ->                                
                                      I  W  G  Q  G  T  M  V  T  V  S  S
                    Query_377    271  TCTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  304
J  100.0% (38/38)   IGHJ3*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_219426

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-66*04                                                                                           277     9e-77
IGHD3-10*02                                                                                           10.3    117  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-66*04	IGHD3-10*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	GGAGAGGGCCTCA	ATGTT	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAGGAGAGGGCCTCAATGTTCTTTGACTAC	VRQERASMFFDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	94	20	0	82.5
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	247	212	35	0	85.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  L  K  V  S  I  N  D  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_378    1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTAAAAGTCAGTATCAATGACATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  85.8% (212/247)  IGHV3-66*04  47   ....................G.............C.CC.......G...CT.......C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  A  L  I  Y  S  D  G  R  T  H  Y  A  G  S  V  K  G  R  I  T  L  S  R  D  T  S  K  
                    Query_378    91   AGTGGGTCGCACTTATCTATAGCGATGGCAGAACACACTACGCAGGCTCCGTCAAGGGCCGAATCACCCTCTCCAGAGACACGTCCAAGA  180
V  85.8% (212/247)  IGHV3-66*04  137  ........T..G....T.......G...T..C...T.........A......G......A..T.....A............AT.......  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  L  D  Y  C  V  R  Q  E  R  A  S  M  F  F  
                    Query_378    181  ACACCTTATATCTTCAAATGAACAGCCTGCGAGTCGACGACACTGCCCTAGATTATTGTGTGAGACAGGAGAGGGCCTCAATGTTCTTTG  270
V  85.8% (212/247)  IGHV3-66*04  227  ....GC.G.....................A...C...G.....G..TG.GT....C....C......-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (5/5)     IGHD3-10*02  9    --------------------------------------------------------------------------------.....-----  13
J  100.0% (44/44)   IGHJ4*02     5    -------------------------------------------------------------------------------------.....  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_378    271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (44/44)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_159931

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            313     2e-87
IGHD3-3*01                                                                                            37.2    1e-06
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGCGACGTCCGGGTCC	TACGATTTTTGGAGTGGTT	CTGGTACTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGCGACGTCCGGGTCCTACGATTTTTGGAGTGGTTCTGGTACTCTTGACTAC	AREATSGSYDFWSGSGTLDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                     <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                        S  L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  T  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_379   1    GGTCCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATTAGTAGTGGTACCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGC  90
V  90.0% (225/250)  IGHV4-4*02  47   ..A.....TCC...A.....G...................C..C...A...A..............................G.......  136
                                        T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                     ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                     L  E  W  I  G  E  I  S  H  S  G  S  T  K  Y  N  T  S  L  R  S  R  V  A  I  S  V  D  R  S  
                    Query_379   91   TGGAGTGGATTGGAGAAATCTCTCATAGTGGGAGCACCAAGTACAACACGTCCCTCAGGAGTCGAGTCGCCATATCAGTAGACAGGTCGA  180
V  90.0% (225/250)  IGHV4-4*02  137  .............G.......A..................C......C.........A..........A...............A...C.  226
                                     L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                     -FR3-IMGT----------------------------------------------------><-------------------------CD
                                     N  K  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  T  S  G  S  Y  
                    Query_379   181  ACAAGCAGTTCTCCCTGAGATTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGAGGCGACGTCCGGGTCCTACG  270
V  90.0% (225/250)  IGHV4-4*02  227  .G..C.............AGC...G.............................................--------------------  296
                                     K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (19/19)   IGHD3-3*01  5    --------------------------------------------------------------------------------------....  8

                                     R3-IMGT------------------------>                                  
                                     D  F  W  S  G  S  G  T  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_379   271  ATTTTTGGAGTGGTTCTGGTACTCTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  336
D  100.0% (19/19)   IGHD3-3*01  9    ...............---------------------------------------------------  23
J  97.6% (41/42)    IGHJ4*02    7    ------------------------.....................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_78988

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           291     5e-81
IGHD6-19*01                                                                                           14.1    7.8  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TTCCTCT	TGGCTGG	GACC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATTCCTCTTGGCTGGGACCTGATGCTTTTCAAATC	ARDSSWLGPDAFQI	225	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	14	2	2	0	0	100
CDR1-IMGT	15	38	24	22	2	0	91.7
FR2-IMGT	39	89	51	49	2	0	96.1
CDR2-IMGT	90	110	21	18	3	0	85.7
FR3-IMGT	111	224	114	105	9	0	92.1
CDR3-IMGT (germline)	225	232	8	7	1	0	87.5
Total	N/A	N/A	220	203	17	0	92.3


Alignments

                                        <-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-----CDR2-IM
                                         G  A  S  I  R  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  M  Y  Y  S  
                    Query_380    13   CTGGTGCCTCCATCAGAAGTTACTACTGGAATTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATGTATTACAGTG  102
V  92.3% (203/220)  IGHV4-59*01  74   ......G.........T.............GC...............................................C..........  163
                                         G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  

                                      GT-----><----------------------------------------------------FR3-IMGT---------------------
                                      G  T  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  G  D  T  S  K  N  Q  F  F  L  T  L  S  S  
                    Query_380    103  GGACTACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGGAGACACGTCTAAGAACCAATTTTTCCTGACGTTGAGCTCTG  192
V  92.3% (203/220)  IGHV4-59*01  164  ...GC.....................A.....................T.........C........G..C.C.....A.C.........  253
                                      G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  

                                      -------------------------------><----------------CDR3-IMGT--------------->                
                                      V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  L  G  P  D  A  F  Q  I  W  G  Q  G  T  
                    Query_380    193  TGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGGGATTCCTCTTGGCTGGGACCTGATGCTTTTCAAATCTGGGGCCAGGGGACAA  282
V  92.3% (203/220)  IGHV4-59*01  254  ............................C........A..--------------------------------------------------  293
                                      V  T  A  A  D  T  A  V  Y  Y  C  A  R                                                     
D  100.0% (7/7)     IGHD6-19*01  12   -----------------------------------------------.......------------------------------------  18
J  90.0% (45/50)    IGHJ3*02     1    ----------------------------------------------------------..........G.T...........A.......  32

                                                        
                                      I  V  T  V  S  S  
                    Query_380    283  TTGTCACCGTGTCTTCAG  300
J  90.0% (45/50)    IGHJ3*02     33   .G........C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_78989

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	AGTGGC	TACTATGACACTAGTGGT	GACATTCC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGTGGCTACTATGACACTAGTGGTGACATTCCCAACTGGTTCGACCCC	SGYYDTSGDIPNWFDP	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  R  R  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_381    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCCGTCGTAATTACTATTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  94.7% (230/243)  IGHV4-61*01  49   ..........................................A..G...G......C.....C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_381    91   CTGGAGTGGATTGGATATATCTATTACCGTGGGACCACCAACTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCC  180
V  94.7% (230/243)  IGHV4-61*01  139  ..............G............A......G............C..............................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  T  Y  Y  C  S  G  Y  Y  D  T  S  G  D 
                    Query_381    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCACTTATTACTGTAGTGGCTACTATGACACTAGTGGTGAC  270
V  94.7% (230/243)  IGHV4-61*01  229  ...................................................GTG.........---------------------------  291
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  88.9% (16/18)    IGHD3-22*01  5    ---------------------------------------------------------------------........T.G.......---  22

                                      GT------------------>                                  
                                       I  P  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_381    271  ATTCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (50/50)   IGHJ5*02     2    -----..................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_346279

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           355     3e-100
IGHD4-17*01                                                                                           27.6    8e-04 
IGHJ6*02                                                                                              106     3e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CGCAGA	ACTACGGTGACTAC	TTCGACCT	TTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCGCAGAACTACGGTGACTACTTCGACCTTTATTACTACTACTACGGTATGGACGTC	AKAQNYGDYFDLYYYYYGMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_382    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGCAGCTTTGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-23*01  47   ....................................C...........A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  N  S  G  G  R  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  V  N  S  
                    Query_382    91   AGTGGGTCTCAGGTATTAATAATAGTGGTGGTAGGACATACTACGTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGTCAATTCCA  180
V  95.6% (238/249)  IGHV3-23*01  137  ............C.....G.GG............C..........C...................................A........  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  A  Q  N  Y  G  D  Y  
                    Query_382    181  AGAACACGCTGTATCTCCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGCGCAGAACTACGGTGACTACT  270
V  95.6% (238/249)  IGHV3-23*01  227  ................G.................................G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (14/14)   IGHD4-17*01  3    ---------------------------------------------------------------------------..............-  16

                                      DR3-IMGT-------------------------->                                 
                                      F  D  L  Y  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_382    271  TCGACCTTTATTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  338
J  96.7% (59/61)    IGHJ6*02     2    -------...C.............................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_346278

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD2-15*01                                                                                           21.8    0.041
IGHJ3*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGG	GGATATAGTAGTGG	CTGCTGCCACCGTTC	TTGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGGGATATAGTAGTGGCTGCTGCCACCGTTCTTGCTGTC	ARDQGDIVVAAATVLAV	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  M  S  G  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_383    4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATGAGTGGTTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  91.4% (223/244)  IGHV4-59*01  50   .....TCC...A.........................C...A...A......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  H  I  F  Y  S  E  S  T  G  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  A  S  K  K  
                    Query_383    94   GGATTGGGCATATCTTTTACAGTGAGAGTACCGGCTATAACCCCTCCCTCAAGAGTCGAGTCACTATATCAGTAGACGCGTCCAAGAAGC  183
V  91.4% (223/244)  IGHV4-59*01  140  ........T......A........G...C...AA...C..........................C............A..........C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  G  D  I  V  V  A  A  
                    Query_383    184  AGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATCAGGGGGATATAGTAGTGGCTGCTG  273
V  91.4% (223/244)  IGHV4-59*01  230  ..................GC..........................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  92.9% (13/14)    IGHD2-15*01  2    ----------------------------------------------------------------------......T.......------  15

                                      ---------------->                                  
                                      A  T  V  L  A  V  W  G  Q  G  T  K  V  T  V  S  S  
                    Query_383    274  CCACCGTTCTTGCTGTCTGGGGCCAAGGGACAAAGGTCACCGTCTCTTCAG  324
J  95.2% (40/42)    IGHJ3*01     9    ---------...A....................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_346277

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           400     9e-114
IGHD5-12*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTAAACGAAA	ATAGTGGCTACGATTA	TGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTAAACGAAAATAGTGGCTACGATTATGCTGACTAC	ARLNENSGYDYADY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	272	16	0	94.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  A  S  Y 
                    Query_384    2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTGCCAGCTAC  91
V  94.4% (272/288)  IGHV1-18*04  7    ............................................................................C....A........  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  F  S  T  Y  N  G  D  T  N  Y  A  Q 
                    Query_384    92   TCTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGTCTTGAGTGGATGGGACGGTTCAGCACTTACAATGGTGACACAAATTATGCACAG  181
V  94.4% (272/288)  IGHV1-18*04  97   GG.A...............................G...............T..A.....G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_384    182  AACCTCCAGGGCAGAGTCACCCTGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTTAGATCTGACGACACGGCC  271
V  94.4% (272/288)  IGHV1-18*04  187  ..G..................A.................................................G..................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                
                                       V  Y  Y  C  A  R  L  N  E  N  S  G  Y  D  Y  A  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_384    272  GTTTATTATTGTGCGAGATTAAACGAAAATAGTGGCTACGATTATGCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  357
V  94.4% (272/288)  IGHV1-18*04  277  ..G.....C.........--------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                     
D  100.0% (16/16)   IGHD5-12*01  7    ----------------------------................------------------------------------------  22
J  100.0% (39/39)   IGHJ4*02     8    -----------------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_72381

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           335     4e-94
IGHD5-12*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACCCCTCGGGA	TGGCTAC	AATCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATACCCCTCGGGATGGCTACAATCCTTTTGACTAC	VRDTPRDGYNPFDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	9	27	19	19	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	126	24	22	2	0	91.7
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	248	8	6	2	0	75
Total	N/A	N/A	240	227	13	0	94.6


Alignments

                                      <----FR1-IMGT-----><-------CDR1-IMGT------><--------------------FR2-IMGT------------------
                                        L  S  C  A  A  S  G  F  M  F  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A
                    Query_385    9    ACTCTCCTGTGCAGCGTCTGGATTCATGTTCAGTAGATATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGC  98
V  94.6% (227/240)  IGHV3-33*01  57   ..........................CC........C.....................................................  146
                                        L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A

                                      ---><-------CDR2-IMGT------><----------------------------------------------------FR3-IMGT-
                                        V  I  W  S  D  G  S  Y  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  K  L
                    Query_385    99   AGTTATATGGTCTGATGGAAGTTATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACAAGTT  188
V  94.6% (227/240)  IGHV3-33*01  147  ...........A..........A...............................................................C.C.  236
                                        V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L

                                      ---------------------------------------------------><----------------CDR3-IMGT------------
                                        Y  L  E  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  T  P  R  D  G  Y  N  P  F  D
                    Query_385    189  ATATCTGGAAATGAGCAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGTCAGAGATACCCCTCGGGATGGCTACAATCCTTTTGA  278
V  94.6% (227/240)  IGHV3-33*01  237  G......C......A...........................G..........CG.....------------------------------  296
                                        Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                 
D  100.0% (7/7)     IGHD5-12*01  11   ------------------------------------------------------------------------.......-----------  17
J  97.7% (42/43)    IGHJ4*02     6    -------------------------------------------------------------------------------------.....  10

                                      --->                                  
                                        Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_385    279  CTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02     11   .................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_346275

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           343     2e-96
IGHD3-10*01                                                                                           25.7    0.003
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAGGGGG	CTATGCTTCGGGGAGT	AAAGAACCT	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGGGGGCTATGCTTCGGGGAGTAAAGAACCTCAACTGGTTCGACCTC	ARQGAMLRGVKNLNWFDL	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R 
                    Query_386    1    ACCCTGTCCCTCACCTGCACTGTTTCTGGTGGCTCCGTCAGCAGTGGATCTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGCGA  90
V  94.0% (234/249)  IGHV4-61*01  49   .......................C.......................TAG.....................................G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  T  V  S  I  D  T  S 
                    Query_386    91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCACCGTGTCAATCGACACGTCC  180
V  94.0% (234/249)  IGHV4-61*01  139  .................T................G.....A...............................A.A...G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  Q  G  A  M  L  R  G 
                    Query_386    181  AAGAACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCCTGTATTATTGTGCGAGACAGGGGGCTATGCTTCGGGGA  270
V  94.0% (234/249)  IGHV4-61*01  229  .........................G.........................G.......C.........---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  93.8% (15/16)    IGHD3-10*01  7    ----------------------------------------------------------------------------.....G........  20

                                      -IMGT--------------------->                                  
                                       V  K  N  L  N  W  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_386    271  GTAAAGAACCTCAACTGGTTCGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  331
D  93.8% (15/16)    IGHD3-10*01  21   ..-----------------------------------------------------------  22
J  96.0% (48/50)    IGHJ5*02     2    -----------..............C..............................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_72383

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           369     2e-104
IGHD2-8*01                                                                                            19.9    0.16  
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCATT	TTGAACTAATGCTGTTTGC	CCGAGAGTACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCATTTTGAACTAATGCTGTTTGCCCGAGAGTACCCCTACTACGGTATGGACGTC	ARDHFELMLFAREYPYYGMDV	249	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	113	1	0	99.1
CDR3-IMGT (germline)	249	256	8	6	2	0	75
Total	N/A	N/A	256	246	10	0	96.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  G  S  G  F  T  F  R  D  Y  T  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_387    1    GGTCCCTGAGACTCTCCTGTACAGGTTCTGGATTCACCTTTCGTGATTATACTATGACCTGGGTCCGCCAGGCTCCTGGGAAGGGGCTGG  90
V  96.1% (246/256)  IGHV3-49*04  47   ........................C................G........G......G..................A.............  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  A  F  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  M  S  R  D  
                    Query_387    91   AGTGGGTAGGTTTCATTAGAAGCAAAGCTTTTGGTGGCACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATGTCAAGAGATG  180
V  96.1% (246/256)  IGHV3-49*04  137  ..............................A......G.........................................C..........  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  D  H  F  E  L  
                    Query_387    181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTGCGAGAGATCATTTTGAACTAA  270
V  96.1% (246/256)  IGHV3-49*04  227  ....................................................................A.T.....--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  84.2% (16/19)    IGHD2-8*01   7    ---------------------------------------------------------------------------------...T.....  15

                                      -----CDR3-IMGT-------------------------->                                 
                                      M  L  F  A  R  E  Y  P  Y  Y  G  M  D  V  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_387    271  TGCTGTTTGCCCGAGAGTACCCCTACTACGGTATGGACGTCTGGGGCCAGGGGACCGCGGTCACCGTCTCCTCA  344
D  84.2% (16/19)    IGHD2-8*01   16   ..G...A...----------------------------------------------------------------  25
J  96.2% (50/52)    IGHJ6*02     11   ----------------------...........................A......A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_346273

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*02                                                                                            386     1e-109
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*02	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACACA	N/A	N/A	ACGTGAGGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCACACAACGTGAGGGGCTACTTTCAATAC	SHNVRGYFQY	263	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	107	7	0	93.9
CDR3-IMGT (germline)	263	269	7	6	1	0	85.7
Total	N/A	N/A	269	258	11	0	95.9


Alignments

                                     <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R
                    Query_388   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGATTCTCACTCAGCACCAGTGGAGTGGGTGTGGGCTGGATCCG  90
V  95.9% (258/269)  IGHV2-5*02  30   ................................................G..............T..........................  119
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                     -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                       Q  S  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  T  R  L  A
                    Query_388   91   TCAGTCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGACCAGGCTCGC  180
V  95.9% (258/269)  IGHV2-5*02  120  ....C...........................................................................G.......A.  209
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                     ---------------------FR3-IMGT----------------------------------------------------><-------
                                       I  T  K  D  T  S  K  N  Q  V  V  V  T  L  T  N  V  D  P  V  D  T  G  T  Y  Y  C  S  H  N
                    Query_388   181  CATCACCAAGGACACCTCCAAAAACCAGGTGGTCGTTACACTGACCAACGTGGACCCTGTAGACACAGGCACATATTACTGTTCACACAA  270
V  95.9% (258/269)  IGHV2-5*02  210  ..................................C.....A........A..........G.......C.............G......-  298
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                     ---CDR3-IMGT--------->                             
                                       V  R  G  Y  F  Q  Y  W  G  Q  G  T  R  V  T  V  S
                    Query_388   271  CGTGAGGGGCTACTTTCAATACTGGGGCCAGGGAACCCGGGTCACCGTCTC  321
J  92.9% (39/42)    IGHJ4*02    2    ---------.......G.C...................T............  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_78981

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD3-3*01                                                                                            10.3    115   
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGCGGAAA	GATTT	C	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGCGGAAAGATTTCCTACTTTGACTAC	ARRGKISYFDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	235	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  H  G  S  I  S  G  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_389    1    ACCCTGTCCCTCACCTGCACTGTCTCTCATGGCTCCATCAGTGGTTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  96.7% (235/243)  IGHV4-59*01  49   ...........................GG.............A...A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  G  T  M  S  V  D  T  S  K  N 
                    Query_389    91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGGCACCATGTCAGTAGACACGTCCAAGAAC  180
V  96.7% (235/243)  IGHV4-59*01  139  .............................................................T......A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  K  I  S  Y  F  D  Y 
                    Query_389    181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGACGCGGAAAGATTTCCTACTTTGACTAC  270
V  96.7% (235/243)  IGHV4-59*01  229  ...................G...........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-3*01   8    -----------------------------------------------------------------------.....--------------  12
J  97.9% (46/47)    IGHJ4*02     2    -----------------------------------------------------------------------------.............  14

                                                                        
                                       W  G  L  G  T  L  V  T  V  S  S  
                    Query_389    271  TGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  304
J  97.9% (46/47)    IGHJ4*02     15   .......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_72386

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           288     5e-80
IGHD2-2*01                                                                                            12.2    32   
IGHJ2*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-2*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TACCAG	TTTTTATCCCCCCTCGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACCAGTTTTTATCCCCCCTCGGACTGGATCTTCGATCTC	ARDTSFYPPSDWIFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  K  A  S  G  F  N  F  K  N  Y  N  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_390    1    GGTCCCTGAGACTCTCCTGTAAAGCCTCTGGATTCAACTTCAAGAACTACAACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  86.8% (217/250)  IGHV3-21*01  47   ....................GC..............C.....GT.G...T.G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  P  R  S  N  D  I  Q  Y  A  A  S  M  Q  G  R  I  T  I  S  R  D  N  A  
                    Query_390    91   AGTGGGTCTCATCGATTAGGCCTAGGAGCAATGACATACAATACGCAGCCTCAATGCAGGGCCGAATTACCATCTCCAGAGACAACGCCA  180
V  86.8% (217/250)  IGHV3-21*01  137  .............C.....TAG...T..T.G.T.....T.C.......A....G..A........T.C......................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  S  S  L  Y  L  H  M  N  N  L  G  P  E  D  T  A  I  Y  F  C  A  R  D  T  S  F  Y  P  P  
                    Query_390    181  ACAGCTCACTGTATCTCCACATGAACAACCTGGGACCCGAGGACACGGCTATCTATTTCTGTGCGAGAGATACCAGTTTTTATCCCCCCT  270
V  86.8% (217/250)  IGHV3-21*01  227  .G.A............G..A.......G....A..G..............G.G....A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------------------------------------------------......--------------  21

                                      T------------------>                                  
                                      S  D  W  I  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_390    271  CGGACTGGATCTTCGATCTCTGGGGCCGTGGCACCCTCGTCACAGTCTCCTCAG  324
J  92.2% (47/51)    IGHJ2*01     3    ---.....TA...........................G.....T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_346270

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           322     2e-90
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCCTC	GTATAGCCGTGGCTGG	CTA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGCCTCGTATAGCCGTGGCTGGCTATACTTTGACTAC	ARDASYSRGWLYFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  E  L  T  F  G  K  S  E  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_391    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGAACTCACCTTCGGGAAGTCCGAAATAAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  91.2% (228/250)  IGHV3-48*03  47   ..............................G.T........A.T.GT.AT.....G.............................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  S  S  G  N  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  N  N  A  
                    Query_391    91   AGTGGCTTTCATATATTAGTAGTAGTGGTAATACCATATACTATGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAAACAACGCCA  180
V  91.2% (228/250)  IGHV3-48*03  137  .....G.......C................G............C....................A...............G.........  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  V  Y  L  Q  M  N  S  L  K  V  E  D  T  A  V  Y  Y  C  A  R  D  A  S  Y  S  R  G  
                    Query_391    181  AGAACTCAGTCTATCTGCAAATGAACAGCCTGAAAGTCGAGGACACGGCAGTTTATTATTGTGCGAGAGATGCCTCGTATAGCCGTGGCT  270
V  91.2% (228/250)  IGHV3-48*03  227  ........C.G......................G..C............T........C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.8% (15/16)    IGHD6-19*01  3    ----------------------------------------------------------------------------.......A......  16

                                      ---------------->                                  
                                      W  L  Y  F  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_391    271  GGCTATACTTTGACTACTGGGGCCAGGGAACCCTGGTGATAGTCTCCTCAG  321
D  93.8% (15/16)    IGHD6-19*01  17   ..-------------------------------------------------  18
J  93.5% (43/46)    IGHJ4*02     3    -----................................C.CC..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_274169

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*02                                                                                            366     2e-103
IGHD2-21*02                                                                                           14.1    9.5   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*02	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGTTTG	GGTGGGGACT	CTCTCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGTTTGGGTGGGGACTCTCTCCCTTTGACTAT	ARDQFGWGLSPFDY	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	19	5	0	79.2
FR3-IMGT	175	288	114	98	16	0	86
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	265	31	0	89.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T 
                    Query_392    1    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGTTTCACC  90
V  89.5% (265/296)  IGHV1-2*02   1    .....G.....G...........G..........................................................CC......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  H  Y  I  H  W  V  R  Q  A  P  G  H  G  P  E  W  M  G  W  I  N  P  K  T  G  G  I  S  Y 
                    Query_392    91   GACCACTATATCCACTGGGTGCGACAGGCCCCTGGACATGGGCCTGAGTGGATGGGATGGATCAACCCGAAGACTGGAGGCATAAGTTAT  180
V  89.5% (265/296)  IGHV1-2*02   91   .G.T.......G..........................A....T........................T..C.G...T....C..AC...  180
                                       G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  E  G  R  V  T  M  T  R  D  T  S  I  S  T  V  Y  M  E  L  S  R  L  T  S  D  D 
                    Query_392    181  GCACAGAAATTTGAAGGCCGGGTCACGATGACCAGGGACACGTCCATTAGTACAGTCTACATGGAGTTGTCGAGGCTGACATCTGACGAC  270
V  89.5% (265/296)  IGHV1-2*02   181  ........G...C.G...A.......C....................C..C....C..........C..AGC.......G..........  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  D  Q  F  G  W  G  L  S  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_392    271  ACGGCCGTATATTACTGTGCGAGAGATCAGTTTGGGTGGGGACTCTCTCCCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCC  360
V  89.5% (265/296)  IGHV1-2*02   271  ........G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  90.0% (9/10)     IGHD2-21*02  11   ----------------------------------.....T....----------------------------------------------  20
J  97.7% (43/44)    IGHJ4*02     5    --------------------------------------------------.........C..............................  44

                                          
                                       S  
                    Query_392    361  TCAG  364
J  97.7% (43/44)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_274168

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           344     6e-97
IGHD2-2*01                                                                                            35.3    4e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	ATTGTACTAGTACCAGGTGCTATG	GGGGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGACATTGTACTAGTACCAGGTGCTATGGGGGATTTGACTTC	TRHCTSTRCYGGFDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  S  L  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_393    1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCAGCCTCAGTAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  94.4% (234/248)  IGHV3-64*01  47   .....................C..............C.T.......C......................................A....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  S  D  G  G  T  T  Y  Y  A  N  S  V  K  G  R  F  A  I  S  R  D  N  S  
                    Query_393    91   AATATGTTTCAGCTATTAGTAGTGATGGGGGTACCACATATTATGCAAACTCTGTGAAGGGCAGATTCGCCATCTCCAGAGACAACTCCA  180
V  94.4% (234/248)  IGHV3-64*01  137  .......................A.........G..................................A................T....  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  F  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  T  R  H  C  T  S  T  R  C  
                    Query_393    181  AGAACACGCTGTTCCTTCAAATGGGAAGCCTGAGAGCTGAGGACATGGCTGTCTATTACTGTACGAGACATTGTACTAGTACCAGGTGCT  270
V  94.4% (234/248)  IGHV3-64*01  227  ............AT...........C..........................G.........G.....----------------------  294
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  91.7% (22/24)    IGHD2-2*01   6    ---------------------------------------------------------------------......G.........C....  26

                                      ---------------->                                  
                                      Y  G  G  F  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_393    271  ATGGGGGATTTGACTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  321
D  91.7% (22/24)    IGHD2-2*01   27   ...------------------------------------------------  29
J  95.3% (41/43)    IGHJ4*02     6    --------.......A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_52488

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CTACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGYRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_394    1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_394    91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  Y  R  V  S  N  G 
                    Query_394    181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCTACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_394    271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_235480

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           343     2e-96
IGHD2-21*01                                                                                           19.9    0.16 
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-21*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CCGCGAGGGGG	TGTGGTGGTG	GATGTGGA	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCCGCGAGGGGGTGTGGTGGTGGATGTGGATGGTTCGACACC	AKAARGCGGGCGWFDT	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  N  I  Y  D  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_395    1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACGTTCAATATCTATGACATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-30*18  47   ........................C............C....G..G.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  M  I  S  N  D  G  S  Y  K  N  Y  A  D  S  V  K  G  R  S  T  I  S  R  D  N  S  
                    Query_395    91   AGTGGGTGGCAATGATATCAAATGATGGAAGTTACAAAAACTATGCAGACTCCGTCAAGGGCCGATCCACCATCTCCAGAGACAATTCCA  180
V  94.0% (234/249)  IGHV3-30*18  137  ...........G.T......T...........A.T...T................G..........T.......................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  S  C  A  K  A  A  R  G  C  G  G  
                    Query_395    181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTCCTGTGCGAAAGCCGCGAGGGGGTGTGGTGGTG  270
V  94.0% (234/249)  IGHV3-30*18  227  ..............C..........................................A...........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD2-21*01  8    --------------------------------------------------------------------------------..........  17

                                      T------------------>                                  
                                      G  C  G  W  F  D  T  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_395    271  GATGTGGATGGTTCGACACCTGGGGCCAGGGAAGTCTGGTCACCGTCTCCTCAG  324
J  93.5% (43/46)    IGHJ5*02     6    --------.........C...............CC...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_52485

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           353     9e-100
IGHD5-18*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATAGTC	ATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATAGTCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	114	0	0	100
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	234	8	0	96.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  V  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_396    4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGTCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  96.7% (234/242)  IGHV4-59*01  50   .....TCC...A....C.............G...........................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  N  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_396    94   GGATTGGGTATATCTACAACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  96.7% (234/242)  IGHV4-59*01  140  ................TT........................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D  
                    Query_396    184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATATAGTCATGGTTACGGAGGAGTTGACT  273
V  96.7% (234/242)  IGHV4-59*01  230  ..............................................................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD5-18*01  13   ---------------------------------------------------------------------........-------------  20
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------------------------------------------......  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_396    274  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (42/42)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_52484

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           363     2e-102
IGHD1-26*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GA	GGTGTAGTGGGAGC	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTAC	ARGGVVGAPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	261	29	0	90


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  T  A  G  G  S  F  S  S  Y
                    Query_397    1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGACCGCTGGAGGTAGTTTCAGCAGCTA  90
V  90.0% (261/290)  IGHV1-69*06  6    ..................G...........................................A.G.TT.......C.CC...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  M  R  Q  A  P  G  Q  G  L  E  W  M  G  A  I  M  P  L  Y  G  I  G  N  Y  A  Q
                    Query_397    91   TGCTATCAGTTGGATGCGACAGGCCCCTGGGCAAGGGCTTGAGTGGATGGGAGCAATCATGCCTCTATATGGCATAGGAAACTACGCACA  180
V  90.0% (261/290)  IGHV1-69*06  96   .........C...G................A......................GG.....C...A.C.T...T.C..C............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  K  V  T  I  T  A  D  T  S  T  R  T  A  Y  M  E  L  S  G  L  R  S  A  D  T  A
                    Query_397    181  GAAGTTCCAGGGCAAAGTCACGATTACCGCGGACACATCCACGAGGACAGCCTACATGGAGTTGAGTGGCCTGAGATCTGCGGACACGGC  270
V  90.0% (261/290)  IGHV1-69*06  186  ..............G....................A.........C...............C....CA............A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  G  G  V  V  G  A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_397    271  CATGTATTATTGTGCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTACTGGGGCCAGGGAACTCTGGTCACCGTCTCCCCAG  353
V  90.0% (261/290)  IGHV1-69*06  276  .G.......C..........---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  92.9% (13/14)    IGHD1-26*01  1    ----------------------...A..........-----------------------------------------------  14
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------------........................C...............T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_52487

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           277     9e-77
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	ACGAA	ACGTTTGG	AAGGGGGGCGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAACGAAACGTTTGGAAGGGGGGCGCGTTTGATATC	ARQRNVWKGGAFDI	250	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	63	36	25	5	6	69.4
FR2-IMGT	64	114	51	46	5	0	90.2
CDR2-IMGT	115	135	21	16	5	0	76.2
FR3-IMGT	136	249	114	97	17	0	85.1
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	219	32	6	85.2


Alignments

                                      <--------FR1-IMGT---------><-------------CDR1-IMGT------------><--------------------FR2-IM
                                       T  L  S  L  T  C  T  V  S  G  A  S  M  S  I  D  S  S  S  Y  C  W  A  W  I  R  Q  H  P  G 
                    Query_398    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGCCTCCATGAGTATCGATAGTAGTAGTTACTGCTGGGCCTGGATCCGCCAGCACCCAGGG  90
V  85.2% (219/257)  IGHV4-39*01  49   .............................T.G......C..C.------............A.....G..............C.......  132
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S        S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  G  L  E  W  V  G  N  I  Y  H  T  G  V  T  Y  S  N  T  S  L  S  R  R  V  S  T  Y  I  D 
                    Query_398    91   AAGGGGCTGGAGTGGGTTGGCAATATCTATCACACTGGGGTCACCTACTCCAATACGTCCCTCAGCAGACGAGTCAGCACATACATAGAT  180
V  85.2% (219/257)  IGHV4-39*01  133  ...............A....G.G.......T.T.G....AG........A...CC.........AG..T.......C..T..C.G....C  222
                                       K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><----------------CDR3
                                       M  S  M  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  R  N  V  W 
                    Query_398    181  ATGTCCATGAACCAGTTTTCCCTGAGGCTGACCTCCGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACAACGAAACGTTTGG  270
V  85.2% (219/257)  IGHV4-39*01  223  .C.....A.........C.......A.....G...T.........................................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  100.0% (8/8)     IGHD3-16*01  12   ----------------------------------------------------------------------------------........  19

                                      -IMGT--------------->                                  
                                       K  G  G  A  F  D  I  W  S  Q  G  T  L  V  T  V  S  S  
                    Query_398    271  AAGGGGGGCGCGTTTGATATCTGGAGCCAAGGGACATTGGTCACCGTCTCTTCAG  325
J  95.3% (41/43)    IGHJ3*02     8    ------------............G...........A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_274162

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHD2-2*01                                                                                            23.8    0.011
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	TACGGTGGAG	TTGTAGTAGGAACAGCTG	ACCGAAACGAAG	TGGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGATACGGTGGAGTTGTAGTAGGAACAGCTGACCGAAACGAAGTGGGCGTC	GRYGGVVVGTADRNEVGV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  N  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_399    1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACTTTCAGTAATTATAGTATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  92.3% (229/248)  IGHV3-21*01  47   .....................C...............C.......GC.....C..........................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  S  K  K  Y  Y  A  G  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_399    91   AGTGGGTCTCATCCATTAGTAGTCGTAGTAGTAAGAAATACTATGCAGGCTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  92.3% (229/248)  IGHV3-21*01  137  .......................A........T.C.T......C....A......................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  F  L  H  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  G  R  Y  G  G  V  V  V  G  
                    Query_399    181  AGAATTCGCTGTTTCTGCACATGAACAGCCTGCGAGCCGAGGACACGGCTGTGTATTACTGTGGGAGATACGGTGGAGTTGTAGTAGGAA  270
V  92.3% (229/248)  IGHV3-21*01  227  ....C..A....A......A............A..............................C....----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD2-2*01   7    ------------------------------------------------------------------------------.........T.C  18

                                      IMGT--------------------->                                 
                                      T  A  D  R  N  E  V  G  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_399    271  CAGCTGACCGAAACGAAGTGGGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  88.9% (16/18)    IGHD2-2*01   19   ......-----------------------------------------------------  24
J  97.6% (40/41)    IGHJ6*02     22   ------------------...A.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_52481

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           10.3    118  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	T	TATGG	ACCCACGCACCGAGCCCGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTATGGACCCACGCACCGAGCCCGATTTGACTAC	ARDYGPTHRARFDY	237	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	112	2	0	98.2
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	232	226	6	0	97.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  N  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_400    13   GTGCAGCGTCTGGATTCACCTTCAGTAACTATGGCATCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATTT  102
V  97.4% (226/232)  IGHV3-33*01  65   ...........................G.........G..................................................A.  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      W  Y  D  G  S  N  E  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_400    103  GGTATGATGGAAGTAATGAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTTTATCTGC  192
V  97.4% (226/232)  IGHV3-33*01  155  .................A................................................................G.......  244
                                      W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  G  P  T  H  R  A  R  F  D  Y  W  
                    Query_400    193  AAATGAACAGCCTGAGAGCCGAAGACACGGCTGTGTATTACTGTGCGAGAGATTATGGACCCACGCACCGAGCCCGATTTGACTACTGGG  282
V  97.4% (226/232)  IGHV3-33*01  245  ......................G.............................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (5/5)     IGHD3-10*01  8    -----------------------------------------------------.....--------------------------------  12
J  100.0% (43/43)   IGHJ4*02     6    -----------------------------------------------------------------------------.............  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_400    283  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (43/43)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_52480

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           414     5e-118
IGHD2-8*01                                                                                            46.8    1e-09 
IGHJ6*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGTGCC	GGATATTGTACTAATGGTATATGCTAT	TTGTCCTA	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCGTGCCGGATATTGTACTAATGGTATATGCTATTTGTCCTAC	ARERAGYCTNGICYLSY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  G  S  Y
                    Query_401    1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCGTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCGGCAGTTA  90
V  95.5% (278/291)  IGHV1-69*01  6    ..................G.......................C.......................................A....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  M  F  E  T  A  N  Y  A  Q
                    Query_401    91   TGTTATTACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATGTTTGAGACAGCAAACTACGCACA  180
V  95.5% (278/291)  IGHV1-69*01  96   ..C...C.G.........................................................C....GT.................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  A  S  T  N  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_401    181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGCATCCACGAACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.5% (278/291)  IGHV1-69*01  186  ...................................A........G.............................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  E  R  A  G  Y  C  T  N  G  I  C  Y  L  S  Y  W  G  Q  G  T  T  V  T  V
                    Query_401    271  CGTGTATTATTGTGCGAGAGAGCGTGCCGGATATTGTACTAATGGTATATGCTATTTGTCCTACTGGGGCCAAGGGACCACGGTCACCGT  360
V  95.5% (278/291)  IGHV1-69*01  276  .........C...........---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  96.3% (26/27)    IGHD2-8*01   2    ----------------------------..................G........-----------------------------------  28
J  97.1% (33/34)    IGHJ6*02     29   ---------------------------------------------------------------...........................  55

                                             
                                        S  S 
                    Query_401    361  CTCGTCA  367
J  97.1% (33/34)    IGHJ6*02     56   ...C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_274167

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           302     3e-84
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ3*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTCGCCAA	ATTACGATTTTTGGAATGGCTATTATA	TTACCAAAAAAGGA	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCGCCAAATTACGATTTTTGGAATGGCTATTATATTACCAAAAAAGGAGCTTTTGATGTC	ARESPNYDFWNGYYITKKGAFDV	236	304	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	45	6	0	88.2
CDR2-IMGT	101	121	21	19	2	0	90.5
FR3-IMGT	122	235	114	107	7	0	93.9
CDR3-IMGT (germline)	236	243	8	8	0	0	100
Total	N/A	N/A	229	211	18	0	92.1


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  I  S  S  S  N  I  N  W  V  R  Q  L  P  G  K  G  L  E  W  V  S  F  I  
                    Query_402    15   GTGCAGCCTCTGGGTTCACCATCAGTAGCAGCAACATAAACTGGGTCCGCCAGCTTCCCGGGAAGGGGCTGGAGTGGGTCTCATTTATTT  104
V  92.1% (211/229)  IGHV3-53*01  65   ....................G.........A.T....G.G.............GC...A........................G......  154
                                         A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  

                                      --CDR2-IMGT-----><----------------------------------------------------FR3-IMGT------------
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  R  G  R  F  T  V  S  G  D  N  S  K  N  T  L  Y  L  Q  
                    Query_402    105  ATAGTGGTGGCAGCACATACTACGCAGACTCCGTGAGGGGCCGATTCACCGTCTCCGGAGACAATTCCAAGAACACTCTGTATCTTCAAA  194
V  92.1% (211/229)  IGHV3-53*01  155  ....C.....T.........................A.............A.....A...................G.............  244
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  

                                      ----------------------------------------><-----------------------------CDR3-IMGT----------
                                      M  E  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  E  S  P  N  Y  D  F  W  N  G  Y  Y  I  T  
                    Query_402    195  TGGAAAGCCTGAGACCCGAGGACACGGCCGTGTATTACTGTGCGAGAGAGTCGCCAAATTACGATTTTTGGAATGGCTATTATATTACCA  284
V  92.1% (211/229)  IGHV3-53*01  245  ..A.C.........G..................................-----------------------------------------  293
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                            
D  92.6% (25/27)    IGHD3-3*01   3    ---------------------------------------------------------...............G...T.......------  29

                                      ------------------->                                  
                                      K  K  G  A  F  D  V  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_402    285  AAAAAGGAGCTTTTGATGTCTGGGGCCAAGGGACATTGGTCACCGTCTCTTCAG  338
J  97.8% (45/46)    IGHJ3*01     5    --------...........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_274166

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           361     4e-102
IGHD5-18*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGG	CTCCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTCCTACTACTTTGACTAC	ARRGYSYGSYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	237	6	0	97.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_403    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  97.5% (237/243)  IGHV4-59*01  49   ......................................................................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_403    91   TGGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.5% (237/243)  IGHV4-59*01  139  .........T................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  G  Y  Y  C  A  R  R  G  Y  S  Y  G  S  Y  Y 
                    Query_403    181  CAGTTCTCCCTGAAGCTGAGTTCTGTGACCGCTGCGGACACGGCCGGGTATTACTGTGCCAGACGTGGATACAGTTATGGCTCCTACTAC  270
V  97.5% (237/243)  IGHV4-59*01  229  ....................C.........................T............G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.8% (15/16)    IGHD5-18*01  1    ----------------------------------------------------------------..........C.....----------  16
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_403    271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_252839

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            444     7e-127
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	289	357	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	70	5	0	93.3
CDR1-IMGT	76	99	24	24	0	0	100
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	113	1	0	99.1
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	290	6	0	98


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_404    1    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACC  90
V  98.0% (290/296)  IGHV1-2*04   1    .....G.....G...........G.............AG...................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 
                    Query_404    91   GGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTAT  180
V  98.0% (290/296)  IGHV1-2*04   91   ..........................................................................................  180
                                       G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 
                    Query_404    181  GCACAGAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGAC  270
V  98.0% (290/296)  IGHV1-2*04   181  ..........................................................................................  270
                                       A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                      -----------------><-----------------------------CDR3-IMGT----------------------------->   
                                       T  A  V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W 
                    Query_404    271  ACGGCCGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGG  360
V  98.0% (290/296)  IGHV1-2*04   271  .............A............----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.7% (18/19)    IGHD3-22*01  7    --------------------------------------...........G.......---------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ---------------------------------------------------------------....A......................  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_404    361  GGCCAAGGGACCACGGTCACCGTCTCCTCA  390
J  98.2% (56/57)    IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_231153

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            346     2e-97
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCACGGTGA	ATTCCTATGATAGTGATGGTTA	C	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCACGGTGAATTCCTATGATAGTGATGGTTACGACTAT	ARGTVNSYDSDGYDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  W  M  S  W  V  G  Q  A  P  G  K  G  L  
                    Query_405    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTCGACATTGGATGAGCTGGGTCGGCCAGGCTCCAGGGAAGGGGCTGC  90
V  94.4% (235/249)  IGHV3-7*01   47   ............................................A.CT.................C.......................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  N  I  N  Q  D  G  S  Q  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_405    91   AGTGGGTGGCCAATATAAACCAAGATGGAAGTCAGAAATATTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-7*01   137  .............C.....G............G.......C.................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  L  L  Y  L  E  M  H  S  L  R  D  E  D  T  A  V  Y  F  C  A  R  G  T  V  N  S  Y  D  
                    Query_405    181  AGAACTTACTGTATCTGGAAATGCACAGCCTGAGAGACGAGGACACGGCTGTGTATTTCTGTGCGAGAGGCACGGTGAATTCCTATGATA  270
V  94.4% (235/249)  IGHV3-7*01   227  ......C..........C.....A............C....................A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.4% (19/22)    IGHD3-22*01  3    ------------------------------------------------------------------------------...A........  14

                                      ---------------->                                  
                                      S  D  G  Y  D  Y  W  G  Q  G  N  L  V  T  V  S  S  
                    Query_405    271  GTGATGGTTACGACTATTGGGGCCAGGGAAACCTGGTCACCGTCTCCTCAG  321
D  86.4% (19/22)    IGHD3-22*01  15   ..AG......-----------------------------------------  24
J  95.0% (38/40)    IGHJ4*02     9    -----------.....C.............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_252833

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           344     6e-97
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CT	ACTGGGGA	TTTGGAA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTACTGGGGATTTGGAATACTTTGACTCC	ATTGDLEYFDS	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  R  S  Y  T  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_406    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCGTTTCAGAAGCTATACCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.7% (233/246)  IGHV3-21*01  47   ...................................ACC.....T.......G.....A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  M  K  G  R  F  S  I  T  R  D  N  A  
                    Query_406    91   AGTGGGTCTCATCCATTAGTAGTAGCAGTAGTTACATATACTACGCAGACTCAATGAAGGGCCGATTCTCCATCACCAGAGACAACGCCA  180
V  94.7% (233/246)  IGHV3-21*01  137  .........................T...........................G..............A.....T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  T  T  G  D  L  E  Y  F  
                    Query_406    181  AGAACTCACTCTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGACTACTGGGGATTTGGAATACTTTG  270
V  94.7% (233/246)  IGHV3-21*01  227  ..........G.............................G...........G.............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD7-27*01  4    --------------------------------------------------------------------........--------------  11
J  95.7% (44/46)    IGHJ4*02     3    -----------------------------------------------------------------------------------.......  9

                                      ---->                                  
                                      D  S  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_406    271  ACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  309
J  95.7% (44/46)    IGHJ4*02     10   ...A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_252832

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           427     9e-122
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	283	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	69	64	64	0	0	100
CDR1-IMGT	70	93	24	21	3	0	87.5
FR2-IMGT	94	144	51	51	0	0	100
CDR2-IMGT	145	168	24	24	0	0	100
FR3-IMGT	169	282	114	112	2	0	98.2
CDR3-IMGT (germline)	283	288	6	6	0	0	100
Total	N/A	N/A	283	278	5	0	98.2


Alignments

                                      <---------------------------FR1-IMGT---------------------------><-------CDR1-IMGT------><-
                                        V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y  W  I
                    Query_407    6    GGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTACTGGAT  95
V  98.2% (278/283)  IGHV5-51*01  12   .......................................................................G...T....G.........  101
                                        V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W  I

                                      -------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------------
                                        G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P  S  F
                    Query_407    96   CGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCCGTCCTT  185
V  98.2% (278/283)  IGHV5-51*01  102  ..........................................................................G...............  191
                                        G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S  F

                                      ------------------------------------FR3-IMGT----------------------------------------------
                                        Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M  Y
                    Query_407    186  CCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGCCATGTA  275
V  98.2% (278/283)  IGHV5-51*01  192  .......................C..................................................................  281
                                        Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M  Y

                                      ------><-----------------CDR3-IMGT----------------->                                  
                                        Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_407    276  TTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  361
V  98.2% (278/283)  IGHV5-51*01  282  .............-------------------------------------------------------------------------  294
                                        Y  C  A  R                                                                          
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------.................------------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_252831

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           441     5e-126
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ACCCTCGG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTCGGTGCTCTTGATATC	ARTLGALDI	289	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	24	0	0	100
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	112	2	0	98.2
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	294	288	6	0	98


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_408    1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  90
V  98.0% (288/294)  IGHV1-18*01  1    ...G.T....................................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y 
                    Query_408    91   AGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAATTAT  180
V  98.0% (288/294)  IGHV1-18*01  91   .........................................G.........................C..................C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_408    181  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  270
V  98.0% (288/294)  IGHV1-18*01  181  .........C................................................................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><--------CDR3-IMGT-------->                                  
                                       T  A  V  Y  Y  C  A  R  T  L  G  A  L  D  I  W  G  Q  G  A  M  V  T  V  S  S  
                    Query_408    271  ACGGCCGTGTATTACTGTGCGAGAACCCTCGGTGCTCTTGATATCTGGGGCCAAGGGGCAATGGTCACCGTCTCTTCAG  349
V  98.0% (288/294)  IGHV1-18*01  271  ........................-------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                        
J  95.7% (45/47)    IGHJ3*02     4    --------------------------------....T....................A.....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_252837

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           321     7e-90
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTGCCTTCGGTCCGA	ATAGCAGT	TGACAGGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGCCTTCGGTCCGAATAGCAGTTGACAGGGGCTACTCCGGCATGGACGTC	ARLPSVRIAVDRGYSGMDV	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  L  N  S  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_409    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGACTCCTTGAATAGTTACTTCTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.2% (224/243)  IGHV4-59*01  49   .............................T.G....A.C.G........A.....G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  D  S  E  T  T  K  Y  N  P  S  L  R  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_409    91   TGGATTGGCTATATCTATGACAGTGAGACCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  92.2% (224/243)  IGHV4-59*01  139  ........G.........T......G..G......C................A....................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  T  V  T  S  V  T  P  A  D  T  A  V  Y  F  C  A  R  L  P  S  V  R  I  A  V  D 
                    Query_409    181  CAGTTCTCCCTGACGGTGACCTCTGTGACCCCTGCGGACACGGCCGTGTATTTCTGTGCGAGATTGCCTTCGGTCCGAATAGCAGTTGAC  270
V  92.2% (224/243)  IGHV4-59*01  229  .............A.C...G..........G.....................A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  5    ------------------------------------------------------------------------------........----  12

                                      ----------------------->                                 
                                       R  G  Y  S  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_409    271  AGGGGCTACTCCGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  327
J  96.2% (50/52)    IGHJ6*02     11   -----.....A...T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_252836

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           346     2e-97
IGHD2-21*02                                                                                           14.1    9.4  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTACG	CGCGCTCTACTTTA	TGGTGAC	CCGC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGCGCGCTCTACTTTATGGTGACCCGCACTTTGACTCC	TRALLYGDPHFDS	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	71	4	0	94.7
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	18	6	0	75
FR3-IMGT	177	290	114	97	17	0	85.1
CDR3-IMGT (germline)	291	293	3	2	1	0	66.7
Total	N/A	N/A	291	256	35	0	88


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  S  S  V  K  V  S  C  K  A  P  G  D  T  F  N 
                    Query_410    3    CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAGGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCTCCTGGAGACACCTTCAAC  92
V  88.0% (256/291)  IGHV1-69*12  1    ...........G......................A............C........................T......G........G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  N  P  L  L  G  P  T  V  Y 
                    Query_410    93   ACCTATGGTATCAACTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGCGGGATCAACCCTCTCTTAGGTCCGACAGTCTAC  182
V  88.0% (256/291)  IGHV1-69*12  91   .G.....C.....G...........................G..............A.......T....A....T...A.AG..AA....  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  H  I  R  D  R  I  T  I  T  A  D  G  S  T  S  T  A  Y  M  E  L  T  S  L  R  S  G  D 
                    Query_410    183  GCACAGCACATCCGGGACAGAATCACGATTACCGCGGACGGATCTACGAGCACAGCCTACATGGAGTTGACCAGCCTGCGATCTGGGGAC  272
V  88.0% (256/291)  IGHV1-69*12  181  ......A.GT...A..G....G..................A...C.....................C...G.......A......A....  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  T  Y  Y  C  T  R  A  L  L  Y  G  D  P  H  F  D  S  W  G  R  G  T  L  V  I  V  S  S 
                    Query_410    273  ACGGCCACATATTACTGTACGCGCGCTCTACTTTATGGTGACCCGCACTTTGACTCCTGGGGCCGGGGAACCCTGGTCATCGTCTCCTCA  362
V  88.0% (256/291)  IGHV1-69*12  271  ......GTG.........G..---------------------------------------------------------------------  291
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (7/7)     IGHD2-21*02  13   -----------------------------------.......------------------------------------------------  19
J  93.3% (42/45)    IGHJ4*02     4    ----------------------------------------------.........A........A..............C..........  47

                                       
                                       
                    Query_410    363  G  363
J  93.3% (42/45)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_252835

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           347     7e-98
IGHD3-22*01                                                                                           41.1    7e-08
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGGCCCCCC	TACTATGATCGTAGTGGTTATTAC	GAC	GATCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGACCGGCCCCCCTACTATGATCGTAGTGGTTATTACGACGATCCTTTTGATATG	ARDRPPYYDRSGYYDDPFDM	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_411    1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACTTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGACTGG  90
V  94.4% (236/250)  IGHV3-74*01  47   .....................C...............C...............................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  G  D  G  T  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_411    91   TGTGGGTCTCACGGATTAATGGCGATGGCACTAGCACAAGTTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-74*01  137  .............T......A.T.....G.G.........C.................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      T  N  T  L  Y  L  E  M  T  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  R  P  P  Y  Y  D  
                    Query_411    181  CGAACACACTGTATCTGGAAATGACCAGTCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCAAGAGACCGGCCCCCCTACTATGATC  270
V  94.4% (236/250)  IGHV3-74*01  227  A......G.........C......A...........C.................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.8% (23/24)    IGHD3-22*01  5    --------------------------------------------------------------------------------.........A  14

                                      R3-IMGT------------------------>                                  
                                      R  S  G  Y  Y  D  D  P  F  D  M  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_411    271  GTAGTGGTTATTACGACGATCCTTTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
D  95.8% (23/24)    IGHD3-22*01  15   ..............----------------------------------------------------  28
J  95.9% (47/49)    IGHJ3*02     2    -----------------...G..........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_252834

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           321     6e-90
IGHD3-3*01                                                                                            12.2    31   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAGTGG	CAAGTAGGG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGAGTGGCAAGTAGGGGGTTCGACCCC	VRGVASRGFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  F  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_412    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCAGCTACTTTATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGACTCG  90
V  91.2% (227/249)  IGHV3-74*01  47   ...........................................T.......GG................................G..G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  A  R  I  R  S  D  G  T  T  T  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  V  
                    Query_412    91   TGTGGGTCGCACGTATTCGGAGTGATGGGACTACCACAGCCTACGCGGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAACGTCA  180
V  91.2% (227/249)  IGHV3-74*01  137  ........T........AAT..........G..G....AG........................A......................C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  S  T  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  V  R  G  V  A  S  R  G  F  
                    Query_412    181  AGAGCACACTGTATCTGGAAATGAACAGTCTGAGAGTCGAGGACACGGCTGTGTATTATTGTGTGAGAGGAGTGGCAAGTAGGGGGTTCG  270
V  91.2% (227/249)  IGHV3-74*01  227  ...A...G.........C..................C.....................C....CA....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-3*01   16   ---------------------------------------------------------------------......---------------  21
J  97.8% (44/45)    IGHJ5*02     7    ------------------------------------------------------------------------------------......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_412    271  ACCCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  309
J  97.8% (44/45)    IGHJ5*02     13   ..........................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_235486

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           371     7e-105
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTAGA	TCAGGA	TGTACTAATACCAGCTGCT	CTCCGGAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTAGATCAGGATGTACTAATACCAGCTGCTCTCCGGATCTACTACTACGGTTTGGACGTC	AVDQDVLIPAALRIYYYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  V  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_413    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTGTTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  97.2% (244/251)  IGHV4-61*08  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  S  G  I  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_413    91   CTGGAGTGGATTGGGTATATCTATAACAGTGGGATCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  97.2% (244/251)  IGHV4-61*08  139  ........................T.........G.......................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       T  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  V  D  Q  D  V  L  I  P 
                    Query_413    181  ACGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGGTAGATCAGGATGTACTAATACCA  270
V  97.2% (244/251)  IGHV4-61*08  229  .A.......................G........................................AG...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.5% (17/19)    IGHD2-2*01   8    -----------------------------------------------------------------------------....G..G.....  20

                                      CDR3-IMGT-------------------------->                                 
                                       A  A  L  R  I  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_413    271  GCTGCTCTCCGGATCTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  339
D  89.5% (17/19)    IGHD2-2*01   21   ......---------------------------------------------------------------  26
J  98.2% (54/55)    IGHJ6*02     8    --------------.............A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_110636

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           265     5e-73
IGHD2-8*01                                                                                            12.2    33   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	C	GTATGC	GACGGAGTGAAATCGGCTTAGGTGGGG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGTATGCGACGGAGTGAAATCGGCTTAGGTGGGGACTTCTTTGACCAC	ARMRRSEIGLGGDFFDH	246	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	21	9	0	70
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	14	7	0	66.7
FR3-IMGT	132	245	114	96	18	0	84.2
CDR3-IMGT (germline)	246	248	3	3	0	0	100
Total	N/A	N/A	245	207	38	0	84.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  S  V  N  Y  L  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_414    4    CCCTGAGACTCTCCTGCACTGTCTCTGGAGGCTCCATCAATAGTGTCAATTACCTCTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  84.5% (207/245)  IGHV4-31*03  50   .....TCC...A................T..........GC....GTGG....TA...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  A  Y  Y  S  G  S  D  R  Y  N  P  S  L  K  N  R  V  S  M  S  L  D  T  S  
                    Query_414    94   TGGAGTGGATTGGGTACGCCTACTACAGTGGGAGTGATCGGTACAACCCATCCCTCAAGAATCGAGTTTCCATGTCACTAGATACGTCGA  183
V  84.5% (207/245)  IGHV4-31*03  140  .................AT...T...........CACCTAC........G..........G.......A....A...G....C.....T.  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  Q  F  S  L  K  V  T  S  M  T  A  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  I  G  
                    Query_414    184  GGAATCAGTTCTCCCTGAAGGTGACCTCTATGACGGCCGCGGACACGGCCATCTATTACTGTGCGCGTATGCGACGGAGTGAAATCGGCT  273
V  84.5% (207/245)  IGHV4-31*03  230  A...C...............C...G....G....T...............G.G............-------------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD2-8*01   20   ------------------------------------------------------------------......------------------  25

                                      GT-------------------->                                  
                                      L  G  G  D  F  F  D  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_414    274  TAGGTGGGGACTTCTTTGACCACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  330
J  93.8% (45/48)    IGHJ4*02     1    ---------...A.......T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_164876

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           286     1e-79
IGHD6-19*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGGGCAAG	ATAGTAGTGGCTGG	GGCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGAAGGGCAAGATAGTAGTGGCTGGGGCTACTACTTTGACACC	VREGQDSSGWGYYFDT	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	217	34	0	86.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  V  N  S  G  F  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_415    1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGGTCCGTCAATAGTGGTTTTTATTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  86.5% (217/251)  IGHV4-61*01  49   ...................C............C.......GC......AG...C..C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  D  W  I  G  N  V  Y  A  T  G  R  T  K  L  K  S  S  L  T  S  R  V  S  M  S  V  D  K  A 
                    Query_415    91   CTGGACTGGATTGGCAATGTCTATGCCACTGGGAGAACCAAATTGAAGTCCTCCCTCACGAGTCGAGTCAGCATGTCCGTAGACAAGGCC  180
V  86.5% (217/251)  IGHV4-61*01  139  .....G........GT..A.....TA..G......C.....C.AC..CC.........A...........C...A..A.......C.T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  L  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  V  R  E  G  Q  D  S  S  G 
                    Query_415    181  AAGAACCTGTTCTCCCTGAAACTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTTTTGTGTGCGAGAAGGGCAAGATAGTAGTGGC  270
V  86.5% (217/251)  IGHV4-61*01  229  .......A............G....G................................AC....C.A....-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD6-19*01  5    -------------------------------------------------------------------------------....C......  15

                                      GT------------------>                                  
                                       W  G  Y  Y  F  D  T  W  G  P  G  T  L  V  T  V  S  S  
                    Query_415    271  TGGGGCTACTACTTTGACACCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  325
D  92.9% (13/14)    IGHD6-19*01  16   ...----------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*02     1    -------...........TA........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_110634

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_416    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  L  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_416    91   AGTGGGTCTCAGCGATTCTTGGGAGCGGTAGTAGCACATACTACTCAGACTCCGTAAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  .............T...AG...T..T...G..............G..........G...........................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_416    181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  93.2% (233/250)  IGHV3-23*01  227  ...............................G....................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_416    271  ATTCACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_110635

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           353     9e-100
IGHD4-17*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD4-17*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	GACTACGGTGACTAC	GGGGCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGACTACGGTGACTACGGGGCCCCTTGACTAC	ERDYGDYGAP*L	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	30	30	29	0	1	96.7
CDR1-IMGT	31	54	24	23	1	0	95.8
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	129	24	20	4	0	83.3
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	9	1	96


Alignments

                                      <----------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT-------
                                         S  L  R  P  L  L  C  S  L  W  I  H  R  Q  *  L  L  H  E  L  D  P  P  G  S  R  E  G  A  
                    Query_417    1    GGTCCCTGAGACCTCTCCTGTGCAGCCTCTGGATTCACCGTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTG  90
V  96.0% (240/250)  IGHV3-11*06  47   ............-..........................T..................................................  135
                                         S  L  R   L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L 

                                      --------------><-------CDR2-IMGT------><--------------------------------------------------
                                      G  V  G  F  I  H  *  *  Y  W  *  L  H  K  L  R  R  L  C  E  G  P  V  H  H  L  Q  R  Q  R  
                    Query_417    91   GAGTGGGTTTCATTCATTAGTAGTACTGGTGATTACACAAACTACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAGCGCC  180
V  96.0% (240/250)  IGHV3-11*06  136  .............A...........G.A..AG.................................A...................A....  225
                                       E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                      Q  E  L  T  V  S  A  N  E  Q  P  E  S  R  G  H  G  C  V  L  L  C  E  R  D  Y  G  D  Y  G  
                    Query_417    181  AAGAACTCACTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGACTACGGTGACTACGGGG  270
V  96.0% (240/250)  IGHV3-11*06  226  .............A........................................................--------------------  295
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (15/15)   IGHD4-17*01  2    -----------------------------------------------------------------------...............----  16

                                      ----------->                                
                                      A  P  *  L  L  G  P  G  N  P  G  H  R  L  L 
                    Query_417    271  CCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
J  100.0% (40/40)   IGHJ4*02     7    ----........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_110632

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            360     1e-101
IGHD1-1*01                                                                                            14.1    8.0   
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACTAAAACAAGAC	CTGGGACGAC	G	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACTAAAACAAGACCTGGGACGACG	ARDTKTRPGTT	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	112	2	0	98.2
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  I  Y  Y  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_418   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTATTTACTACTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  96.4% (239/248)  IGHV4-4*02  49   ..............................................G.A...GG....G...............................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  S  G  T  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_418   91   GAGTGGATTGGGGAAATCTATCATAGTGGGACCGCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  96.4% (239/248)  IGHV4-4*02  139  ...............................G.A........................................................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                      N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  K  T  R  P  G  T 
                    Query_418   181  AACCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATACTAAAACAAGACCTGGGACG  270
V  96.4% (239/248)  IGHV4-4*02  229  .................G....G.............................................----------------------  296
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  90.0% (9/10)     IGHD1-1*01  8    ----------------------------------------------------------------------------------....A...  15

                                     -->                                  
                                      T  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_418   271  ACGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
D  90.0% (9/10)     IGHD1-1*01  16   ..-----------------------------------  17
J  100.0% (34/34)   IGHJ4*02    15   ---..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_110633

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           257     1e-70
IGHD5-18*01                                                                                           14.1    8.6  
IGHJ3*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GAATTTGGCGGG	ACAGCTTTGG	CCAGGC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGAATTTGGCGGGACAGCTTTGGCCAGGCTGATGCTTTTGATGTC	AKGIWRDSFGQADAFDV	246	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	131	33	21	3	9	63.6
FR3-IMGT	132	245	114	96	18	0	84.2
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	240	204	27	9	85


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  I  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  L  I  
                    Query_419    13   GTGCAGCCTCTGGATTCATCTTTAGTAACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCACTTATTA  102
V  85.0% (204/240)  IGHV3-23*01  65   ..................C......C.G...........G...........................................GC.....  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      --------CDR2-IMGT-----------><----------------------------------------------------FR3-IMGT
                                      S  G  S  G  A  R  G  R  S  T  Y  Y  A  S  S  V  K  G  R  F  T  I  S  R  D  N  S  K  K  M  
                    Query_419    103  GCGGAAGTGGTGCTAGAGGTCGTAGTACATATTATGCAAGCTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCAAGAAAATGA  192
V  85.0% (204/240)  IGHV3-23*01  155  .T..T.......---------....C.....C..C...GA....................................T........C.C.C  235
                                      S  G  S  G           G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  

                                      ----------------------------------------------------><--------------------CDR3-IMGT-------
                                      M  F  L  D  M  G  S  L  R  V  E  D  T  A  I  Y  Y  C  A  K  G  I  W  R  D  S  F  G  Q  A  
                    Query_419    193  TGTTTTTGGATATGGGGAGCCTGAGAGTCGAGGACACGGCCATATATTATTGTGCGAAAGGAATTTGGCGGGACAGCTTTGGCCAGGCTG  282
V  85.0% (204/240)  IGHV3-23*01  236  ...A.C..C.A...AAC..........C.............G.......C..........------------------------------  295
                                      L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                
D  90.0% (9/10)     IGHD5-18*01  7    ------------------------------------------------------------------------......A...--------  16
J  98.0% (49/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------------..  2

                                      ------------->                                  
                                      D  A  F  D  V  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_419    283  ATGCTTTTGATGTCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  330
J  98.0% (49/50)    IGHJ3*01     3    .............................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_164871

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           339     2e-95
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CATGCTTTCCTCGACTGATATGT	CGTTCGGGGGA	TTTTTGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACATGCTTTCCTCGACTGATATGTCGTTCGGGGGATTTTTGATTGACCAG	ARDMLSSTDMSFGGFLIDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	234	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  S  S  R  S  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_420    1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGACTCCATCAGCAGTAGAAGTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGG  90
V  93.2% (234/251)  IGHV4-39*02  49   ...................C...........G...............T...........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  E  S  *  V  A  I  S  I  D  T  S 
                    Query_420    91   CTGGAATGGATTGGGAATATCTATTATAGTGGGAGCACCGACTACAACCCGTCCCTCGAGAGTTGAGTCGCCATATCGATAGACACGTCC  180
V  93.2% (234/251)  IGHV4-39*02  139  .....G..........G......................T.................A.....C.....A.......CG...........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  M  L  S  S  T  D 
                    Query_420    181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACCGCCGCAGACACGGCTATTTATTACTGTGCGAGAGACATGCTTTCCTCGACTGAT  270
V  93.2% (234/251)  IGHV4-39*02  229  ........C............C....C........................G.G.................-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       M  S  F  G  G  F  L  I  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_420    271  ATGTCGTTCGGGGGATTTTTGATTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  90.9% (10/11)    IGHD3-16*01  13   ----....T......-------------------------------------------------  23
J  95.2% (40/42)    IGHJ4*02     7    ----------------------.....T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_164870

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           444     7e-127
IGHD3-10*01                                                                                           18.0    0.67  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGCCC	GTTCGGGGA	CTTTCCCAAAAAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGCCCGTTCGGGGACTTTCCCAAAAAAACTTTGACTAC	ARDLPVRGLSQKNFDY	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	74	1	0	98.7
CDR1-IMGT	78	101	24	24	0	0	100
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	110	4	0	96.5
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	290	6	0	98


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_421    3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  92
V  98.0% (290/296)  IGHV1-18*01  1    .....T....................................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 
                    Query_421    93   AGCTATGGTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTAT  182
V  98.0% (290/296)  IGHV1-18*01  91   .........A................................................................................  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  L  R  G  R  V  T  M  T  T  D  T  S  A  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_421    183  GCACAGAAACTCCGGGGCAGAGTCACCATGACCACAGACACTTCCGCGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  272
V  98.0% (290/296)  IGHV1-18*01  181  ........G....A...........................A...A............................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  D  L  P  V  R  G  L  S  Q  K  N  F  D  Y  W  G  Q  G  T  L  V  T 
                    Query_421    273  ACGGCCGTGTATTACTGTGCGAGAGATCTGCCCGTTCGGGGACTTTCCCAAAAAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACC  362
V  98.0% (290/296)  IGHV1-18*01  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (9/9)     IGHD3-10*01  12   ---------------------------------.........------------------------------------------------  20
J  100.0% (45/45)   IGHJ4*02     4    -------------------------------------------------------...................................  38

                                                
                                       V  S  S  
                    Query_421    363  GTCTCCTCAG  372
J  100.0% (45/45)   IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_309388

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD6-13*01                                                                                           14.1    9.8   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGCG	GCAACACCTGGTA	TCGAGATTCTCAGGCCGGCAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGCGGCAACACCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGAC	ARHSGNTWYRDSQAGIYFDD	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  G  G  Y
                    Query_422    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCCCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCGGCTA  90
V  94.8% (276/291)  IGHV5-51*01  6    .............................................T....................................AC.A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_422    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAACCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ......................................................................................G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  R  S  L  G  T  A  Y  L  Q  W  P  S  L  K  A  S  D  T  A
                    Query_422    181  GTCCTTTCAAGGACAGGTCACCATCTCAGTCGACAGGTCCCTCGGAACCGCCTACCTGCAGTGGCCCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  ......C.....C................C.....A....A..A.C..................AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  Y  C  A  R  H  S  G  N  T  W  Y  R  D  S  Q  A  G  I  Y  F  D  D  W  G  Q  G  T  L
                    Query_422    271  CATGTACTACTGTGCGAGACACAGCGGCAACACCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGACTGGGGCCAGGGAACCCT  360
V  94.8% (276/291)  IGHV5-51*01  276  ......T..............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  84.6% (11/13)    IGHD6-13*01  8    --------------------------...G..G......---------------------------------------------------  20
J  95.7% (45/47)    IGHJ4*02     2    ------------------------------------------------------------......T...T...................  31

                                                       
                                        V  T  V  S  S  
                    Query_422    361  GGTCACCGTCTCCTCAG  377
J  95.7% (45/47)    IGHJ4*02     32   .................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_266343

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_423    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_423    91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_423    181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  95.5% (231/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_423    271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_84219

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           374     7e-106
IGHD3-3*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	242	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_424    1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (242/245)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_424    91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.8% (242/245)  IGHV4-34*01  139  .........................................................................T................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_424    181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  98.8% (242/245)  IGHV4-34*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_424    271  GCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_164879

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           357     1e-100
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTTTGTGG	TACTCTGGTTCGGGGAGT	AGAACCCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTTGTGGTACTCTGGTTCGGGGAGTAGAACCCGTTTTGACTAC	ARALWYSGSGSRTRFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_425    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGTCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATTCGCCAGCACCCAGGGAAGGGC  90
V  95.6% (239/250)  IGHV4-31*03  49   .............................T.G.............................G......C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  T  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_425    91   CTGGAGTGGATTGGATACATCTATTACAGTGGGAGCACCTACTACACCCCGTCCCTCAAGAGTCGAGTTTCCATTTCAGTCGACACGTCT  180
V  95.6% (239/250)  IGHV4-31*03  139  ..............G...............................A......................A....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  L  W  Y  S  G  S 
                    Query_425    181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTATTGTGCGAGAGCTTTGTGGTACTCTGGTTCG  270
V  95.6% (239/250)  IGHV4-31*03  229  .........................G.................................C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  5    ------------------------------------------------------------------------------....A.......  16

                                      MGT-------------------->                                  
                                       G  S  R  T  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_425    271  GGGAGTAGAACCCGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  94.4% (17/18)    IGHD3-10*01  17   ......----------------------------------------------------  22
J  100.0% (43/43)   IGHJ4*02     6    ---------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_164878

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            319     2e-89
IGHD1-26*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	G	AGTGGGA	TGGCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGAGTGGGATGGCTCCCTGACTAC	VGGVGWLPDY	237	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	20	4	0	83.3
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	243	7	5	2	0	71.4
Total	N/A	N/A	232	218	14	0	94


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  S  I  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 
                    Query_426    12   TGTGCAGCCTCTGGATTCAGCATTAGTGACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATA  101
V  94.0% (218/232)  IGHV3-7*01   64   ...................C.T.....AG...........G.................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       E  K  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_426    102  GAGAAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTG  191
V  94.0% (218/232)  IGHV3-7*01   154  A..C.................T....................................................................  243
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------CDR3-IMGT--------->               
                                       Q  M  D  S  L  R  V  E  D  T  A  L  Y  Y  C  V  G  G  V  G  W  L  P  D  Y  W  G  Q  G  T 
                    Query_426    192  CAGATGGACAGCCTGAGAGTCGAGGACACGGCTCTGTATTACTGTGTGGGAGGAGTGGGATGGCTCCCTGACTACTGGGGCCAGGGAACC  281
V  94.0% (218/232)  IGHV3-7*01   244  ..A...A............C.............G............C.A...--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (7/7)     IGHD1-26*01  6    -----------------------------------------------------.......------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    --------------------------------------------------------------------......................  29

                                                         
                                       L  V  T  V  S  S  
                    Query_426    282  CTGGTCACCGTCTCCTCAG  300
J  100.0% (41/41)   IGHJ4*02     30   ...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_77608

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           452     3e-129
IGHD6-13*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAC	ATAGCAGCAGCTGGT	CGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTTC	ARSHSSSWSGFDF	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	289	0	0	100


Alignments

                                       <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                     Query_427    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  100.0% (289/289)  IGHV5-51*03  6    ..........................................................................................  95
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                       ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                         W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                     Query_427    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  100.0% (289/289)  IGHV5-51*03  96   ..........................................................................................  185
                                         W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                       ------------------------------------------FR3-IMGT----------------------------------------
                                         S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                     Query_427    181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  100.0% (289/289)  IGHV5-51*03  186  ..........................................................................................  275
                                         S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                       ------------><--------------CDR3-IMGT-------------->                                  
                                         M  Y  Y  C  A  R  S  H  S  S  S  W  S  G  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_427    271  CATGTATTACTGTGCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  100.0% (289/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                         M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)    IGHD6-13*01  5    -----------------------...............------------------------------------------------  19
J  97.7% (43/44)     IGHJ4*02     5    ------------------------------------------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_77609

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTTGA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTTGACC	ARGDYDIGLT	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  L  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_428    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCCTTACTCACTACTGGAGCTGGATTCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  91.8% (224/244)  IGHV4-59*01  49   .......................................AG..G.T................C.................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_428    91   TGGATTGGATATATCTATTACAGTGGGACCACCACTTATAACCCTTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  91.8% (224/244)  IGHV4-59*01  139  ........G...................G.....AC..C.....C..................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  L  T  W 
                    Query_428    181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTTGACCTGG  270
V  91.8% (224/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (36/36)   IGHJ5*02     16   -------------------------------------------------------------------------------------.....  20

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_428    271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (36/36)   IGHJ5*02     21   ...............................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_343738

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           293     2e-81
IGHD3-3*01                                                                                            12.2    31   
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GCCCGAATTGGGGACCCCT	TTATTTTAC	T	CCCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGGCCCGAATTGGGGACCCCTTTATTTTACTCCC	TTGPNWGPLYFTP	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	126	30	17	5	8	56.7
FR3-IMGT	127	239	114	103	10	1	90.4
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	255	223	23	9	87.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  D  D  A  W  M  S  W  V  R  Q  A  P  G  Q  G  L  
                    Query_429    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCGTTTCGATGACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGACAGGGGCTGG  90
V  87.5% (223/255)  IGHV3-15*01  47   .......T...........................AC....AG.A..................................GA.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  Q  I  E  T  D  V           D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_429    91   AGTGGGTTGGCCGTATTCAAATTGAAACTGATGTTG---------ACTATGCTGCACCCGTGAAAGGCCGTTTCACTATCTCAAGAGATG  171
V  87.5% (223/255)  IGHV3-15*01  137  .................A...GCA.........G..GGACAACAG....C..................A.A.....C.............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      D  S  N  N  M  V  Y  L  Q  M  H  S  L  K  T  E  D  T  A  V  *  Y  C  T  T  G  P  N  W  G  
                    Query_429    172  ATTCAAACAACATGGTGTATCTGCAAATGCACAGCCTGAAAACCGAGGACACAGCCGTGTAGTATTGTACCACAGGCCCGAATTGGGGAC  261
V  87.5% (223/255)  IGHV3-15*01  227  .......A....C.C..............A...............................T..C..........---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 

                                      GT-------------->                                  
                                      P  L  Y  F  T  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_429    262  CCCTTTATTTTACTCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  312
D  88.9% (8/9)      IGHD3-3*01   22   ----.....A...--------------------------------------  30
J  97.3% (36/37)    IGHJ5*02     15   --------------...............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_343735

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           338     5e-95
IGHD1-26*01                                                                                           10.3    122  
IGHJ6*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAAGCTCTTCGGTTA	ATAGT	N/A	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCAAGCTCTTCGGTTAATAGTTACGACTACTACGGTATGGACGTC	ARSSSSVNSYDYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_430    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAGTAATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGACTGG  90
V  93.5% (232/248)  IGHV3-48*03  47   ....................................C...C....G.................................G.....G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  A  V  F  I  S  V  S  G  R  N  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_430    91   AGTGGGCTGTATTCATTAGTGTTAGTGGTAGGAACATATACTACGCGGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  93.5% (232/248)  IGHV3-48*03  137  ......T.TC..A.......AG.........T.C............A.................A.........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  S  S  S  V  N  S  
                    Query_430    181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCTGTTTATTACTGTGCGAGATCAAGCTCTTCGGTTAATAGTT  270
V  93.5% (232/248)  IGHV3-48*03  227  ........................................G...........................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  4    ------------------------------------------------------------------------------------.....-  8
J  96.5% (55/57)    IGHJ6*02     6    -----------------------------------------------------------------------------------------.  6

                                      GT-------------------->                                 
                                      Y  D  Y  Y  G  M  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_430    271  ACGACTACTACGGTATGGACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  326
J  96.5% (55/57)    IGHJ6*02     7    ..T...........................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_343734

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            380     1e-107
IGHD3-22*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTG	ATTACTATGATAGTAGTGGTTA	CCCA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTGATTACTATGATAGTAGTGGTTACCCAGACTAC	ASLDYYDSSGYPDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	114	0	0	100
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	244	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_431    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  99.6% (244/245)  IGHV4-4*02   49   ..............................................G...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_431    91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  99.6% (244/245)  IGHV4-4*02   139  ..........................................................................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  D  Y  Y  D  S  S  G 
                    Query_431    181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGCCTTGATTACTATGATAGTAGTGGT  270
V  99.6% (244/245)  IGHV4-4*02   229  .................................................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (22/22)   IGHD3-22*01  3    ----------------------------------------------------------------------....................  22

                                      ----------->                                  
                                       Y  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_431    271  TACCCAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (22/22)   IGHD3-22*01  23   ..--------------------------------------------  24
J  100.0% (40/40)   IGHJ4*02     9    ------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_343737

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           310     1e-86
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	C	GGGACTTATGC	CAACTCGCCG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGACTTATGCCAACTCGCCGTACTGGTACTTCGATCTC	ASGTYANSPYWYFDL	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	41	10	0	80.4
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	223	25	0	89.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  T  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  R  R 
                    Query_432    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTACTGGTGGCTACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAGGAGA  90
V  89.9% (223/248)  IGHV4-39*02  49   ....................................A....C.G.A..A.T.........G.C........C........A....A.G.G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  T  G  S  A  Y  H  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_432    91   CTGGAGTGGATTGGCTATATCTATTATACTGGGAGCGCCTACCACAACCCGTCCCTCAAGAGTCGTGTCACCATGTCCGTAGACACGTCC  180
V  89.9% (223/248)  IGHV4-39*02  139  ..............GAG...........G.......A.....T......................A........A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       N  N  H  F  S  L  Q  L  S  S  V  T  D  A  D  T  A  V  Y  Y  C  A  S  G  T  Y  A  N  S  P 
                    Query_432    181  AACAACCACTTCTCCCTGCAGCTGAGCTCTGTGACCGACGCAGACACGGCTGTCTATTACTGTGCGAGCGGGACTTATGCCAACTCGCCG  270
V  89.9% (223/248)  IGHV4-39*02  229  ..G...............A..................C...............G..............----------------------  296
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.9% (10/11)    IGHD3-16*01  20   ---------------------------------------------------------------------....G......----------  30

                                      ----------------->                                  
                                       Y  W  Y  F  D  L  W  G  R  G  P  L  V  T  V  S  S  
                    Query_432    271  TACTGGTACTTCGATCTCTGGGGCCGTGGCCCCCTGGTCACTGTCTCCTCAG  322
J  98.1% (51/52)    IGHJ2*01     2    ..............................A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_343736

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     4e-95
IGHD1-1*01                                                                                            10.3    113  
IGHJ1*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TG	ACGAC	CTAA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGACGACCTAAAC	AKDDDLN	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  N  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_433    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATAACTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-23*01  47   .........................................AGC.G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  G  V  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_433    91   AGTGGGTCTCAACCATTAGTGGTAGTGGAGTTACCACATACTATGCAGACTCCGTAAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  ...........G.T..............T.G..G.........C...........G..................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  D  D  L  N  W  G  
                    Query_433    181  AGAGCACGCTGTACCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTTTATTACTGCGCGAAAGATGACGACCTAAACTGGGGCC  270
V  93.2% (233/250)  IGHV3-23*01  227  ...A.........T..........................G...........A........T........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD1-1*01   13   ------------------------------------------------------------------------.....-------------  17
J  100.0% (36/36)   IGHJ1*01     17   ---------------------------------------------------------------------------------.........  25

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_433    271  AGGGCACCCTGGTCACCGTCTCCTCAG  297
J  100.0% (36/36)   IGHJ1*01     26   ...........................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_343731

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           304     1e-84
IGHD6-19*01                                                                                           10.3    123  
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	ATCGCATCTCAG	GCAGT	TGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAATCGCATCTCAGGCAGTTGTTCTACTACGACGGTATGGACGTC	AKESHLRQLFYYDGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  L  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_434    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACCTCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  88.8% (222/250)  IGHV3-23*01  47   ..........................................G.AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  T  S  S  G  G  I  S  P  R  Y  A  D  S  F  K  G  R  F  T  I  S  R  D  N  S  
                    Query_434    91   AGTGGGTCTCTTCTACTAGTAGTGGTGGTATTAGTCCACGCTACGCCGACTCCTTCAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  88.8% (222/250)  IGHV3-23*01  137  ..........AG...T....G..A.....GG...CA..TA......A......G.G..................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  M  L  W  L  H  M  T  S  L  T  V  D  D  T  A  I  Y  Y  C  A  K  E  S  H  L  R  Q  L  
                    Query_434    181  AGAACATGCTGTGGCTGCATATGACCAGCCTGACAGTCGACGACACGGCCATTTATTACTGTGCGAAAGAATCGCATCTCAGGCAGTTGT  270
V  88.8% (222/250)  IGHV3-23*01  227  ......C.....AT.....A....A........G..C...G.........G.A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD6-19*01  8    ----------------------------------------------------------------------------------.....---  12

                                      GT-------------------->                                 
                                      F  Y  Y  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_434    271  TCTACTACGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  98.2% (54/55)    IGHJ6*02     8    -.......T...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_343730

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         313     2e-87
IGHD5-12*01                                                                                           21.8    0.042
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GAAGGTTAAGAC	GTGGATATAGCGGC	CAGCCTCCTGGAA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAAGGTTAAGACGTGGATATAGCGGCCAGCCTCCTGGAAGGTTCGACCCC	ARGRLRRGYSGQPPGRFDP	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  V  V  S  G  G  S  I  T  S  G  D  Y  S  W  S  W  I  R  L  P  P  G  K  G 
                    Query_435      1    ACCCTGTCCCTCACCTGCGTTGTCTCTGGTGGCTCCATCACCAGCGGTGATTACTCCTGGAGCTGGATCCGGCTGCCTCCAGGGAAGGGC  90
V  90.0% (225/250)  IGHV4-30-2*01  49   ...................C....................G...T....G.......................A...A............  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  T  G  S  I  F  D  N  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S 
                    Query_435      91   CTAGAGTGGACTGGGTCCATCTTTGATAATGGGCGCACCTACTACAATCCGTCCCTCAAGAGTCGAGTCACCATATCGCTGGACAAGTCC  180
V  90.0% (225/250)  IGHV4-30-2*01  139  ..G.......T.....A.....A.C...G....A.............C.............................AG.A....G....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                         R  N  H  F  S  L  E  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  L  R  R  G  Y 
                    Query_435      181  AGGAACCACTTTTCCCTGGAACTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGCCAGAGGAAGGTTAAGACGTGGATAT  270
V  90.0% (225/250)  IGHV4-30-2*01  229  .A......G..C......A.G.....C................................C..........--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD5-12*01    1    ----------------------------------------------------------------------------------........  8

                                        3-IMGT----------------------->                                 
                                         S  G  Q  P  P  G  R  F  D  P  W  G  Q  G  T  L  V  I  V  S  S 
                    Query_435      271  AGCGGCCAGCCTCCTGGAAGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCA  333
D  92.9% (13/14)    IGHD5-12*01    9    ..T...---------------------------------------------------------  14
J  97.7% (43/44)    IGHJ5*02       7    -------------------.................................C..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_77604

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           343     2e-96
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCCATCTTGGCGG	TTACGCTTTTTGGCGTGGTTATT	CCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCCATCTTGGCGGTTACGCTTTTTGGCGTGGTTATTCCCTTGACTAC	ARDPHLGGYAFWRGYSLDY	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	20	6	0	76.9
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	126	24	24	0	0	100
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  T  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_436    2    CCCTGTCCCTCACCTGCACAGCGTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCCCCAGGCAAGGGGCTGGAGT  91
V  94.3% (233/247)  IGHV3-33*01  50   .....AGA...T....TG........................G...........................T...................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  A  V  I  W  Y  D  G  S  N  K  Y  H  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  K  
                    Query_436    92   GGGTGGCTGTTATATGGTATGATGGAAGTAATAAATACCATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCAAGA  181
V  94.3% (233/247)  IGHV3-33*01  140  .......A..............................T.............................A.....................  229
                                      W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------CDR3-IM
                                      K  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  H  L  G  G  Y  A  
                    Query_436    182  AGACGTTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGAGATCCCCATCTTGGCGGTTACGCTT  271
V  94.3% (233/247)  IGHV3-33*01  230  .C...C.................................................C...........-----------------------  296
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  91.3% (21/23)    IGHD3-3*01   4    ----------------------------------------------------------------------------------.....A..  11

                                      GT----------------------->                                  
                                      F  W  R  G  Y  S  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_436    272  TTTGGCGTGGTTATTCCCTTGACTACTGGGGCCAGGGAACCCTTGTTACCGTCTCCTCAG  331
D  91.3% (21/23)    IGHD3-3*01   12   .....A.........---------------------------------------------  26
J  95.2% (40/42)    IGHJ4*02     7    ------------------.........................G..C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_343732

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           260     1e-71
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	93	21	0	81.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	205	39	0	84


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_437    1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  84.0% (205/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_437    91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  84.0% (205/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_437    181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACGTAT  270
V  84.0% (205/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_437    271  GTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    ---------------------------------...G....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_312689

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            363     2e-102
IGHD3-3*01                                                                                            21.8    0.045 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAG	CGATTTGTGGAGAGGTT	CTACCCCTAAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGAGATAGCGATTTGTGGAGAGGTTCTACCCCTAAGTTTGACTAC	ARDSDLWRGSTPKFDY	273	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	80	30	25	5	0	83.3
FR2-IMGT	81	131	51	48	3	0	94.1
CDR2-IMGT	132	158	27	26	1	0	96.3
FR3-IMGT	159	272	114	102	12	0	89.5
CDR3-IMGT (germline)	273	280	8	7	1	0	87.5
Total	N/A	N/A	280	256	24	0	91.4


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  T  I  S  G  D  S  V  S  S  E  S  V  A  W  N  W  
                    Query_438   1    CAGGACTGGTGAAGCCCTCGCAGACTCTCTCACTCACCTGTACCATCTCCGGAGACAGTGTCTCCAGCGAAAGTGTTGCTTGGAACTGGG  90
V  91.4% (256/280)  IGHV6-1*01  26   .........................C...............G..........G...........T...A.C....C.............A  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     V  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  M  S  K  W  Y  N  H  Y  S  D  S  V  K  
                    Query_438   91   TCAGGCAGTCGCCGTCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACATGTCCAAGTGGTATAATCATTATTCAGATTCTGTGAAAA  180
V  91.4% (256/280)  IGHV6-1*01  116  ..........C..A.....................................G................G.....G...TA..........  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  M  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  M  N  S  V  T  P  E  D  T  A  M  Y  Y  
                    Query_438   181  GTCGAATGACCATCGACCCAGACACATCCAAGAACCAGTTCTCGCTACAGATGAACTCTGTGACCCCCGAGGACACGGCTATGTACTACT  270
V  91.4% (256/280)  IGHV6-1*01  206  .......A......A............................C..G...C.............T...............G....T....  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><-------------------CDR3-IMGT------------------>                                  
                                     C  A  R  D  S  D  L  W  R  G  S  T  P  K  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_438   271  GTGCTAGAGATAGCGATTTGTGGAGAGGTTCTACCCCTAAGTTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  354
V  91.4% (256/280)  IGHV6-1*01  296  ....A.....--------------------------------------------------------------------------  305
                                     C  A  R                                                                             
D  88.2% (15/17)    IGHD3-3*01  7    -------------......T.....T....------------------------------------------------------  23
J  97.7% (42/43)    IGHJ4*02    6    -----------------------------------------.....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_233275

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            325     3e-91
IGHD1-26*01                                                                                           12.2    31   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGTTTC	TATAGT	CGCGTTGGCTGCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTTTCTATAGTCGCGTTGGCTGCTTCTTTGACTAC	ARCFYSRVGCFFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  E  F  T  F  S  T  Y  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_439    1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGAATTCACCTTTAGTACCTACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (228/248)  IGHV3-7*01   47   .....................C........G..............G...T.GG.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  R  H  D  E  T  V  K  T  Y  V  D  S  V  K  G  R  F  T  T  S  R  D  N  A  
                    Query_439    91   AGTGGGTGGCAAACATAAGGCACGATGAAACTGTGAAAACCTATGTGGACTCTGTGAAGGGCCGATTCACCACGTCCAGAGACAACGCCA  180
V  91.9% (228/248)  IGHV3-7*01   137  ..........C.......A...A....G..G..A....TA................................TC................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  C  F  Y  S  R  V  G  
                    Query_439    181  AGAACTCACTGTATCTGCAAATGGATAGCCTGAGACCTGAGGACACGGCTGTGTATTACTGTGCGAGATGTTTCTATAGTCGCGTTGGCT  270
V  91.9% (228/248)  IGHV3-7*01   227  .......................A.C.........G.C..............................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------......----------  8

                                      ------------->                                  
                                      C  F  F  D  Y  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_439    271  GCTTCTTTGACTACTGGGGCCAGGGAGTGTTGGTCACCGTCTCCTCAG  318
J  90.9% (40/44)    IGHJ4*02     5    ----......................ACCC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_312684

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD2-2*02                                                                                            12.2    32    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCA	CTGGTATAC	TTACGTCAGCGGGGGATATG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTGGTATACTTACGTCAGCGGGGGATATGTTGACTAC	ARGHWYTYVSGGYVDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_440    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S 
                    Query_440    91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGCTACCATATCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ................A.................G................................T......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  W  Y  T  Y  V 
                    Query_440    181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCACTGGTATACTTACGTC  270
V  97.6% (244/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (8/9)      IGHD2-2*02   22   --------------------------------------------------------------------------...C.....-------  30

                                      GT------------------>                                  
                                       S  G  G  Y  V  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_440    271  AGCGGGGGATATGTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  325
J  97.6% (41/42)    IGHJ4*02     7    -------------.............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_312683

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           355     3e-100
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ2*01                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCAAAGCAGG	TTACTATGATAATAGTGG	CCCAGGTCAAGAG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGCCAAAGCAGGTTACTATGATAATAGTGGCCCAGGTCAAGAGTTCGATCTC	TRAKAGYYDNSGPGQEFDL	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  E  F  T  F  S  H  Y  G  M  H  W  V  R  K  A  P  G  K  G  L  
                    Query_441    1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGAATTCACCTTCAGTCACTATGGCATGCACTGGGTCCGCAAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-33*01  47   ..............................G.............AG......................C.....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_441    91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAAAAGTATGCAGATTCCGTGAAGGGGCGATTCACCATCTCCAGAGACAACTCCG  180
V  95.6% (238/249)  IGHV3-33*01  137  ......................................T.C........C...........C.......................T...A  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      E  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  A  K  A  G  Y  Y  D  
                    Query_441    181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTACGAGAGCCAAAGCAGGTTACTATGATA  270
V  95.6% (238/249)  IGHV3-33*01  227  ..............................................................G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD3-22*01  4    -------------------------------------------------------------------------------...........  14

                                      -IMGT----------------------->                                  
                                      N  S  G  P  G  Q  E  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_441    271  ATAGTGGCCCAGGTCAAGAGTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCTTCAG  333
D  94.4% (17/18)    IGHD3-22*01  15   G......--------------------------------------------------------  21
J  97.7% (42/43)    IGHJ2*01     11   --------------------......................................C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_312682

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           361     4e-102
IGHD3-3*01                                                                                            14.1    8.3   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTA	ACGATTT	ACATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACGATTTACATTATGGTATGGACGTC	ARVNDLHYGMDV	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	113	1	0	99.1
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_442    4    CCCTGAGACTCTCCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATTCGCCAGCACCCAGGGAAGGGCC  93
V  96.4% (240/249)  IGHV4-31*03  50   .....TCC...A......C................................................C......................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  V  G  Y  M  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_442    94   TGGAGTGGGTTGGGTACATGTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  96.4% (240/249)  IGHV4-31*03  140  ........A..........C......................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  D  L  H  Y  G  
                    Query_442    184  AGAACCAGCTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTTAACGATTTACATTATGGTA  273
V  96.4% (240/249)  IGHV4-31*03  230  ........T............................................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-3*01   6    ------------------------------------------------------------------------.......-----------  12
J  100.0% (45/45)   IGHJ6*02     18   --------------------------------------------------------------------------------------....  21

                                      ------->                                 
                                      M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_442    274  TGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (45/45)   IGHJ6*02     22   .........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_312681

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTATCGTTCGGGGACTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATCGTTCGGGGACTTATTTTGACTAC	ARGLYYYRSGTYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_443    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ...................................................T.........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  T  R  I  T  I  S  V  D  T  S 
                    Query_443    91   CTGGAGTGGATTGGGCACATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGACTCGAATTACCATATCAGTAGACACCTCC  180
V  96.0% (240/250)  IGHV4-31*03  139  ...............T..........C..................................G....G...................G..T  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  R  S 
                    Query_443    181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCTATTACTATCGTTCG  270
V  96.0% (240/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (22/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------.........G.....  16

                                      ----------------->                                  
                                       G  T  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_443    271  GGGACTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  91.7% (22/24)    IGHD3-10*01  17   ....G....-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    ---------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_312680

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCAATT	GTATTACTCTGATAGTAGTGATTA	CTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCAATTGTATTACTCTGATAGTAGTGATTACTTCTAC	AKQLYYSDSSDYFY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  F  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  T  P  G  K  G  L  
                    Query_444    1    GGTCCCTGAGACTCTCCTGTGCAGCCTTCGGATTCACCTTTAGCAACTATGCCATGAGCTGGGTCCGCCAAACTCCAGGGAAGGGACTGG  90
V  93.9% (232/247)  IGHV3-23*01  47   ...........................CT................G........................GG.............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  G  D  R  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_444    91   AGTGGGTCTCAACTATTAGTGGTAGTGGCGATAGAACACACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  93.9% (232/247)  IGHV3-23*01  137  ...........G................T.G...C...T....C.........................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  R  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  Q  L  Y  Y  S  D  S  
                    Query_444    181  AGAGAACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGCAATTGTATTACTCTGATAGTA  270
V  93.9% (232/247)  IGHV3-23*01  227  ...AC..............................................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  91.7% (22/24)    IGHD3-22*01  1    -------------------------------------------------------------------------........A........  17

                                      ------------->                                  
                                      S  D  Y  F  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_444    271  GTGATTACTTCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  91.7% (22/24)    IGHD3-22*01  18   ...G...-----------------------------------------  24
J  100.0% (38/38)   IGHJ4*02     11   ----------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_221978

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           339     2e-95
IGHD1-1*01                                                                                            12.2    31   
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CTCCTTCGAGGAAAC	TACAAC	N/A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACTCCTTCGAGGAAACTACAACGATGCTTTTGATGTC	AGLLRGNYNDAFDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  H  G  E  S  F  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_445    1    ACCCTGTCCCTCACCTGCACTGTCCATGGTGAGTCCTTCAGTGGTTACTACTGGAACTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAA  90
V  94.7% (230/243)  IGHV4-34*01  49   ..................G.....T......G.......................G.................................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_445    91   TGGATTGGGGAAATCAATCATACTGGAAGCACCAACTACAACCCGTCCCTGAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAA  180
V  94.7% (230/243)  IGHV4-34*01  139  ......................G...........................C......................................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  G  L  L  R  G  N  Y  N  D  A 
                    Query_445    181  CAATTCTCCCTGAACCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTTCTGTGCGGGACTCCTTCGAGGAAACTACAACGATGCT  270
V  94.7% (230/243)  IGHV4-34*01  229  ..G...........G................................G....A.......A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-1*01   3    ------------------------------------------------------------------------------......------  8
J  98.0% (48/49)    IGHJ3*01     2    ------------------------------------------------------------------------------------......  7

                                      -------->                                  
                                       F  D  V  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_445    271  TTTGATGTCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  313
J  98.0% (48/49)    IGHJ3*01     8    ........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_221979

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           290     2e-80
IGHD6-6*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTCTG	CTTAGTGGGTGGCCGTG	ATAGCAGCTCGTCC	GGCCTGAG	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TTAGTGGGTGGCCGTGATAGCAGCTCGTCCGGCCTGAGCGTC	LVGGRDSSSSGLSV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	241	113	102	11	0	90.3
Total	N/A	N/A	241	213	28	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  G  S  G  F  I  F  S  D  Y  G  V  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_446    1    GGTCCCTGAGACTCTCCTGTTCAGGCTCTGGATTCATCTTCAGTGACTATGGTGTACAGTGGGTCCGCCAGGCTCCAGGAAAGGGACTGG  90
V  88.4% (213/241)  IGHV3-64*05  47   ........................C...........C.......AG.....C.A.G..C....................G..........  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  A  I  G  G  H  G  T  T  T  Y  Y  T  D  P  L  K  G  R  F  I  V  S  R  D  N  S  
                    Query_446    91   AATTTGTTTCGGCTATTGGTGGTCATGGGACTACCACATACTACACAGACCCACTGAAGGGCAGATTCATCGTCTCCAGAGACAATTCCA  180
V  88.4% (213/241)  IGHV3-64*05  137  ...A......A......A..A..A.....GG..G..........G.....T..G...............C.A..................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  V  Y  L  Q  M  S  N  L  R  I  E  D  T  A  V  Y  F  C  L  V  G  G  R  D  S  S  S  
                    Query_446    181  AGAACACGGTGTATCTTCAAATGAGCAATCTGAGAATTGAGGACACGGCTGTGTATTTCTGCTTAGTGGGTGGCCGTGATAGCAGCTCGT  270
V  88.4% (213/241)  IGHV3-64*05  227  ........C.....G............G.......GC....................A...-----------------------------  287
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y                                
D  100.0% (14/14)   IGHD6-6*01   5    ------------------------------------------------------------------------------............  16

                                      ------------->                                 
                                      S  G  L  S  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_446    271  CCGGCCTGAGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
D  100.0% (14/14)   IGHD6-6*01   17   ..---------------------------------------------  18
J  100.0% (37/37)   IGHJ6*02     26   ----------.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_26683

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            411     4e-117
IGHD3-16*01                                                                                           12.2    35    
IGHJ3*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GCTTCC	TGGGGG	CCATGAGA	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATC	ARGFLGAMRDGLDI	273	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	109	5	0	95.6
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	271	8	0	97.1


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  D  T  W  N  W  
                    Query_447    1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGATACTTGGAACTGGA  90
V  97.1% (271/279)  IGHV6-1*01   26   ...........................................................................C.G............  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_447    91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGGAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  97.1% (271/279)  IGHV6-1*01   116  .....................................A....................................................  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  S  S  K  N  Q  F  S  L  Q  L  N  S  V  T  F  E  D  T  A  V  Y  F  
                    Query_447    181  GTCGAATAACCATTAACCCAGACTCATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTTTCGAGGACACGGCTGTGTATTTCT  270
V  97.1% (271/279)  IGHV6-1*01   206  .............C.........A.........................................CC....................A..  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------------CDR3-IMGT--------------->                                  
                                      C  A  R  G  F  L  G  A  M  R  D  G  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_447    271  GTGCAAGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  348
V  97.1% (271/279)  IGHV6-1*01   296  .........---------------------------------------------------------------------  304
                                      C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  17   ---------------......---------------------------------------------------------  22
J  95.9% (47/49)    IGHJ3*02     2    -----------------------------....C...T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_221970

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           422     2e-120
IGHJ3*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ACCCTCGG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTCGGTGCTCTTGATATC	ARTLGALDI	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	279	9	0	96.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_448    2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGGTACACATTTACCAGCTAT  91
V  96.9% (279/288)  IGHV1-18*01  7    .......................................................................T.....C............  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_448    92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAATTATGCCCAG  181
V  96.9% (279/288)  IGHV1-18*01  97   ...................................G.........................C..................C.....A...  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  F  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_448    182  AAGTTCCAGGGCAGATTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.9% (279/288)  IGHV1-18*01  187  ...C...........G..........................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------CDR3-IMGT-------->                                  
                                       V  Y  Y  C  A  R  T  L  G  A  L  D  I  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_448    272  GTCTATTACTGTGCGAGAACCCTCGGTGCTCTTGATATCTGGGGCCAAGGGGCATTGGTCACCGTCTCTTCAG  344
V  96.9% (279/288)  IGHV1-18*01  277  ..G...............-------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                        
J  93.6% (44/47)    IGHJ3*02     4    --------------------------....T....................A..A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_221972

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_449    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_449    91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_449    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  96.1% (49/51)    IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  S  V  P  S  
                    Query_449    271  GACCCCTGGGGCCAGGGAACCCTGGTCTCCGTCCCCTCAG  310
J  96.1% (49/51)    IGHJ5*02     12   ...........................A.....T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_221973

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           294     6e-82
IGHD6-19*01                                                                                           12.2    31   
IGHJ6*01                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GGCTGG	AGGCAGCGC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCTGGAGGCAGCGCCTATTATTATGGTTTGGACGTC	ARAGGSAYYYGLDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	215	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  R  S  G  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_450    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGAAGTGGCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  88.8% (215/242)  IGHV4-59*08  49   ..................A......................T...TA......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  Y  N  G  G  S  T  D  Y  N  P  S  L  R  S  R  V  S  I  S  A  D  T  S  K  K 
                    Query_450    91   TGGATTGGATACTTCTATAATGGGGGGAGCACCGATTACAATCCCTCCCTCAGGAGTCGAGTCTCCATCTCAGCAGACACGTCCAAGAAG  180
V  88.8% (215/242)  IGHV4-59*08  139  ........G..TA.....T.CA.T.........A.C.....C..........A..........A....A....T...............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  L  S  L  T  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  G  S  A  Y  Y  Y  G 
                    Query_450    181  CAACTCTCCCTGACGGTGACCTCTGTGACCGCCGCAGACACGGCCGTTTACTACTGTGCGAGGGCTGGAGGCAGCGCCTATTATTATGGT  270
V  88.8% (215/242)  IGHV4-59*08  229  ..GT.........A.C...G...........................G..T...........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD6-19*01  13   --------------------------------------------------------------......----------------------  18
J  90.9% (50/55)    IGHJ6*01     8    -----------------------------------------------------------------------------...C..C..C...  20

                                      -------->                                 
                                       L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_450    271  TTGGACGTCTGGGGGCAAGGGACCACGGTCACTGTCTCCTCA  312
J  90.9% (50/55)    IGHJ6*01     21   A...............................C.........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_221974

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           353     1e-99
IGHD3-22*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCAC	ARAPPFDYDLDVRGIHNFDH	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	235	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_451    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (235/244)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  R 
                    Query_451    91   TGGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGCGC  180
V  96.3% (235/244)  IGHV4-59*01  139  ..........A.................G.............................................A............AA.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D 
                    Query_451    181  CAGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGAC  270
V  96.3% (235/244)  IGHV4-59*01  229  ..................AG...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-22*01  6    ----------------------------------------------------------------------------........------  13

                                      GT------------------------>                                  
                                       V  R  G  I  H  N  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_451    271  GTAAGGGGAATCCACAACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  97.8% (44/45)    IGHJ4*02     4    ----------------........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_221976

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           352     3e-99
IGHD4-17*01                                                                                           27.6    8e-04
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CGCAGA	ACTACGGTGACTAC	TTCGACCT	TTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCGCAGAACTACGGTGACTACTTCGACCTTTATTACTACTACTACGGTATGGACGTC	AKAQNYGDYFDLYYYYYGMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_452    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGCAGCTTTGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-23*01  47   ....................................C...........A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  N  S  G  G  R  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  V  N  S  
                    Query_452    91   AGTGGGTCTCAGGTATTAATAATAGTGGAGGTAGGACATACTACGTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGTCAATTCCA  180
V  95.2% (237/249)  IGHV3-23*01  137  ............C.....G.GG......T.....C..........C...................................A........  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  A  Q  N  Y  G  D  Y  
                    Query_452    181  AGAACACGCTGTATCTCCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGCGCAGAACTACGGTGACTACT  270
V  95.2% (237/249)  IGHV3-23*01  227  ................G.................................G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (14/14)   IGHD4-17*01  3    ---------------------------------------------------------------------------..............-  16

                                      DR3-IMGT-------------------------->                                 
                                      F  D  L  Y  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_452    271  TCGACCTTTATTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  338
J  96.7% (59/61)    IGHJ6*02     2    -------...C.............................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_26685

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           279     3e-77
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	216	28	6	86.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_453    4    CCCTGAGACTCTCCTGTGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.4% (216/250)  IGHV4-34*01  50   .....TCC...A....C.....C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_453    94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.4% (216/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_453    184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.4% (216/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_453    274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_59798

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD5-12*01                                                                                           14.1    8.1   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGA	TGGCTAC	AATCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGGCTACAATCCTTACTTTGACTAC	ARDDGYNPYFDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_454    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  S  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  L  I  D  T  S  K  N 
                    Query_454    91   TGGAGTGGGTATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATTAATAGACACGTCTAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  ....T............................A..........C.................C.......C.G..........C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  D  G  Y  N  P  Y  F  D 
                    Query_454    181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGATGGCTACAATCCTTACTTTGAC  270
V  96.3% (236/245)  IGHV4-59*01  229  .............................C..T................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-12*01  11   --------------------------------------------------------------------.......---------------  17
J  97.8% (45/46)    IGHJ4*02     3    ---------------------------------------------------------------------------------.........  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_454    271  TACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  307
J  97.8% (45/46)    IGHJ4*02     12   ........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_59799

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            391     6e-111
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_455   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.1% (270/290)  IGHV1-8*02  6    ..................G..........................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_455   91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.1% (270/290)  IGHV1-8*02  96   ........A.........................................................C.......................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_455   181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCGGAAGACACGGC  270
V  93.1% (270/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A..................C..........G.GAT.T..G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_455   271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.1% (270/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_143633

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           266     2e-73
IGHD3-10*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              29.5    4e-04


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGGACATGTTAG	GGTTCGGGG	CCTTGGGTCCCCCTGCCCGGG	GGGGC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	208	38	0	84.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  S  Y  A  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_456    1    GGTCCCTGAGACTCTCCTGTGCGGTCTCTGGATTCACCTTTTCCAGTTATGCCATCTCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  84.6% (208/246)  IGHV3-23*01  47   ......................A.C................AG...C........GAG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  G  I  G  D  S  A  A  K  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  K  S  
                    Query_456    91   TGTGGGTCTCTGGCATCGGTGACAGTGCTGCCAAGACATATTACGCAGACTCCGTGAGGGGCCGCTTCACCATCTCCAGAGACAAGTCCA  180
V  84.6% (208/246)  IGHV3-23*01  137  A.........A.CT..TA...GT....G..GT.GC.....C................A......G....................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT---------------------------------------------------->                            
                                      R  M  T  V  Y  L  Q  M  N  S  L  R  P  E  D  T  G  M  Y  F  C  A  R  D  M  L  G  F  G  A  
                    Query_456    181  GAATGACAGTATATCTGCAAATGAACAGTCTGAGACCCGAGGACACGGGCATGTATTTCTGTGCGAGGGACATGTTAGGGTTCGGGGCCT  270
V  84.6% (208/246)  IGHV3-23*01  227  AG.AC..GC.G.................C......G............C.G.A....A........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD3-10*01  11   ------------------------------------------------------------------------------.........---  19

                                                                                         
                                      L  G  P  P  A  R  G  G  R  A  V  L  V  S  V  P  S  
                    Query_456    271  TGGGTCCCCCTGCCCGGGGGGGCCGGGCAGTCCTGGTCTCCGTCCCCTCAG  321
J  81.8% (27/33)    IGHJ4*02     16   ------------------......A..G.AC.......A.....T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_59790

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_457    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  98.3% (284/289)  IGHV5-51*03  6    ..............................................................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_457    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ...................................................G............................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_457    181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_457    271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  353
V  98.3% (284/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    ------------------------------------------..............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_213985

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD2-2*02                                                                                            12.2    32    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCA	CTGGTATAC	TTACGTCAGCGGGGGATATG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTGGTATACTTACGTCAGCGGGGGATATGTTGACTAC	ARGHWYTYVSGGYVDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_458    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S 
                    Query_458    91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGCTACCATATCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ................A.................G................................T......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  W  Y  T  Y  V 
                    Query_458    181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCACTGGTATACTTACGTC  270
V  97.6% (244/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (8/9)      IGHD2-2*02   22   --------------------------------------------------------------------------...C.....-------  30

                                      GT------------------>                                  
                                       S  G  G  Y  V  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_458    271  AGCGGGGGATATGTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  325
J  97.6% (41/42)    IGHJ4*02     7    -------------.............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_59792

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            305     3e-85
IGHD1-7*01                                                                                            14.1    8.4  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	GCGGCTT	TAACTCCAACTAC	ATTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATGCGGCTTTAACTCCAACTACATTGTTTGACGAC	AKDAALTPTTLFDD	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	251	9	9	0	0	100
Total	N/A	N/A	251	223	28	0	88.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  N  H  A  M  H  W  V  R  Q  F  P  G  K  G  L  
                    Query_459   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCGACAATCATGCCATGCACTGGGTCCGGCAATTTCCAGGGAAGGGCCTGG  90
V  88.8% (223/251)  IGHV3-9*01  47   ........................................T..TG..T.......................GC.................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  L  S  W  D  S  G  I  T  K  Y  A  D  F  V  Q  G  R  F  I  I  S  R  D  N  T  
                    Query_459   91   AGTGGGTCTCAGGTCTTAGTTGGGATAGTGGAATCACAAAATATGCGGACTTTGTGCAGGGCCGATTCATCATTTCGAGAGACAACACCA  180
V  88.8% (223/251)  IGHV3-9*01  137  ..............A........A.......T.G..T.GGC..........C....A............C...C..C.........G...  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                     K  N  S  L  F  L  L  M  T  S  L  R  P  E  D  T  A  F  Y  F  C  A  K  D  A  A  L  T  P  T  
                    Query_459   181  AGAACTCCCTGTTTTTGCTAATGACCAGTCTGCGACCTGAGGACACGGCCTTCTATTTCTGTGCAAAAGATGCGGCTTTAACTCCAACTA  270
V  88.8% (223/251)  IGHV3-9*01  227  ............A.C...A.....A.......A..G................G....A.............-------------------  297
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  84.6% (11/13)    IGHD1-7*01  5    ------------------------------------------------------------------------------.....GG.....  16

                                     ------------->                                  
                                     T  L  F  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_459   271  CATTGTTTGACGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  84.6% (11/13)    IGHD1-7*01  17   .-----------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02    6    -----......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_59793

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           369     2e-104
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAGGGGG	CTATGCTTCGGGGAGT	AAAGAACCT	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGGGGGCTATGCTTCGGGGAGTAAAGAACCTCAACTGGTTCGACCGC	ARQGAMLRGVKNLNWFDR	267	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	80	30	27	3	0	90
FR2-IMGT	81	131	51	49	2	0	96.1
CDR2-IMGT	132	152	21	20	1	0	95.2
FR3-IMGT	153	266	114	105	9	0	92.1
CDR3-IMGT (germline)	267	272	6	6	0	0	100
Total	N/A	N/A	272	254	18	0	93.4


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  
                    Query_460    1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGTACTGTTTCTGGTGGCTCCGTCAGCAGTGGATCTTACTACTGGAGCTGGA  90
V  93.4% (254/272)  IGHV4-61*01  26   ................T.......................C.....C.......................TAG.................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  P  P  G  K  R  L  E  W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  
                    Query_460    91   TCCGGCAGCCCCCAGGGAAGCGACTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAG  180
V  93.4% (254/272)  IGHV4-61*01  116  ....................G...................T................G.....A..........................  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  V  S  I  D  T  S  K  N  Q  F  P  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  
                    Query_460    181  TCACCGTGTCAATCGACACGTCCAAGAACCAGTTCCCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCCTGTATTATTGTGCGA  270
V  93.4% (254/272)  IGHV4-61*01  206  .....A.A...G.A.....................T............G.........................G.......C.......  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      -------------------CDR3-IMGT--------------------->                                  
                                      R  Q  G  A  M  L  R  G  V  K  N  L  N  W  F  D  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_460    271  GACAGGGGGCTATGCTTCGGGGAGTAAAGAACCTCAACTGGTTCGACCGCTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  354
V  93.4% (254/272)  IGHV4-61*01  296  ..----------------------------------------------------------------------------------  297
                                      R                                                                                   
D  93.8% (15/16)    IGHD3-10*01  7    ---------.....G..........-----------------------------------------------------------  22
J  96.0% (48/50)    IGHJ5*02     2    ----------------------------------..............C..............................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_59794

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           425     3e-121
IGHD6-6*01                                                                                            14.1    9.7   
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGCGTTCGAGGG	GCAGCGCGTC	GAGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGCGTTCGAGGGGCAGCGCGTCGAGGTGGTTCGACCCC	ARRRSRGSASRWFDP	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	109	5	0	95.6
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	294	283	11	0	96.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  D  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  A  
                    Query_461    5    AGGTTCAGCTGGTGCAGTCTGGAGCAGATGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGCCA  94
V  96.3% (283/294)  IGHV5-51*01  2    ....G.......................G.........................................................A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  N  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  V  G  I  I  Y  P  G  D  S  D  T  A  Y  
                    Query_461    95   CCAACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGGTGGGGATCATCTATCCTGGTGACTCTGATACCGCATACA  184
V  96.3% (283/294)  IGHV5-51*01  92   G.T...............................................A................................AG.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  T  S  D  
                    Query_461    185  GCCCGTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGACCTCGGACA  274
V  96.3% (283/294)  IGHV5-51*01  182  ...................G............................G...............................G.........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  Y  C  A  R  R  R  S  R  G  S  A  S  R  W  F  D  P  W  G  Q  G  T  Q  V  T  V  
                    Query_461    275  CCGCCATGTATTACTGTGCGAGACGGCGTTCGAGGGGCAGCGCGTCGAGGTGGTTCGACCCCTGGGGCCAGGGAACCCAAGTCACCGTCT  364
V  96.3% (283/294)  IGHV5-51*01  272  ........................------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  90.0% (9/10)     IGHD6-6*01   8    ------------------------------------.....T....--------------------------------------------  17
J  95.7% (44/46)    IGHJ5*02     6    --------------------------------------------------............................TG..........  45

                                            
                                      S  S  
                    Query_461    365  CCTCAG  370
J  95.7% (44/46)    IGHJ5*02     46   ......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_59795

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ATTTCT	TATGGTTCGGGGAGT	CACGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAATTTCTTATGGTTCGGGGAGTCACGGGTGGTTCGACCCC	ARISYGSGSHGWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  K  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_462    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAAATACTTCTGGAGTTGGATCCGTCAGCCCCCCGGGAAGGGCCTGGAG  90
V  90.9% (221/243)  IGHV4-59*01  49   ...............................G.........T.GT....A......C........G........A........A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  I  G  T  T  S  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_462    91   TGGATTGGTTACATCTATTACATTGGGACCACCAGCTACAACCCCTCCCTCGAGAGTCGCGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  90.9% (221/243)  IGHV4-59*01  139  ........G..T..........G.....G.....A................A.......A..............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  R  A  M  Y  Y  C  A  R  I  S  Y  G  S  G  S  H  G 
                    Query_462    181  CAGTTCTCCCTGAAGCTAACGTCTGTGACCGCTGCGGACAGGGCCATGTATTACTGTGCGCGAATTTCTTATGGTTCGGGGAGTCACGGG  270
V  90.9% (221/243)  IGHV4-59*01  229  .................G.GC...................C....G..............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (15/15)   IGHD3-10*01  8    ---------------------------------------------------------------------...............------  22

                                      ----------->                                  
                                       W  F  D  P  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_462    271  TGGTTCGACCCCCGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.8% (45/46)    IGHJ5*02     6    ............T.................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_59796

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD3-10*01                                                                                           12.2    30   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCATGTCCCC	ATTACT	TCCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCATGTCCCCATTACTTCCATTGACTTC	ARAHVPITSIDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  A  I  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_463    1    ACCCTGTCCCTCACGTGCATTGTCTCTGGTGGCGCCATCAGTGGTTATTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.0% (222/244)  IGHV4-59*01  49   ..............C....C.............T........A....C.......G.........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  N  G  N  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  K 
                    Query_463    91   TGGATTGGCTATATCTATTACAATGGAAACACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCGAAGAAA  180
V  91.0% (222/244)  IGHV4-59*01  139  ........G.............G...G.G....A..................................A...G..........C.....C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  K  M  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  V  P  I  T  S  I  D 
                    Query_463    181  CACTTCTCCCTGAAGATGACCTCCATGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCATGTCCCCATTACTTCCATTGAC  270
V  91.0% (222/244)  IGHV4-59*01  229  ..G............C...G...TG......................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-10*01  3    ---------------------------------------------------------------------------......---------  8
J  92.7% (38/41)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                 
                                       F  W  G  L  G  T  L  V  T  V  S  S 
                    Query_463    271  TTCTGGGGCCTGGGAACCCTGGTCACCGTCTCGTCA  306
J  92.7% (38/41)    IGHJ4*02     12   .A........A.....................C...  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_59797

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD6-13*01                                                                                           12.2    32   
IGHJ5*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCGCCGACG	GCAGCA	CCACCTTCTTCTTCCCCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCGCCGACGGCAGCACCACCTTCTTCTTCCCCGACTGGTTCGACCCC	ARTADGSTTFFFPDWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  I  S  G  G  S  I  N  K  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_464    1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGGCTCCATCAATAAATACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAG  90
V  94.7% (230/243)  IGHV4-59*01  49   .....................G..................G..GT...........C.............................G...  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  R  S  K  N 
                    Query_464    91   TGGATAGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACAGGTCCAAGAAC  180
V  94.7% (230/243)  IGHV4-59*01  139  .....T..G...............................................................G......C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  V  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  A  D  G  S  T  T  F  F 
                    Query_464    181  CAGGTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAACCGCCGACGGCAGCACCACCTTCTTC  270
V  94.7% (230/243)  IGHV4-59*01  229  ...T.........A.................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-13*01  8    -------------------------------------------------------------------------......-----------  13

                                      -------------------->                                  
                                       F  P  D  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_464    271  TTCCCCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ5*02     4    -------................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_234799

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           43.0    2e-08
IGHJ3*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TATCACTGC	TTACTATGATAGTAGTGGTTAT	A	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATATCACTGCTTACTATGATAGTAGTGGTTATAATGCTTTTGATATC	VRDITAYYDSSGYNAFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  L  R  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_465    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCCTTAGGAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ...................................A..T....C.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  D  S  S  V  S  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_465    91   AGTGGGTCTCAGGTATTAGTGATAGTAGTGTTAGTACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATTTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  ............C........G....G...G...C...T..................................C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  V  Q  M  N  R  M  R  A  E  D  T  A  V  Y  Y  C  V  R  D  I  T  A  Y  Y  D  
                    Query_465    181  AGAACACGCTGTATGTGCAAATGAACAGAATGAGAGCCGAGGACACGGCCGTATATTACTGTGTGAGAGATATCACTGCTTACTATGATA  270
V  93.6% (234/250)  IGHV3-23*01  227  ..............C.............CC.................................C..A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (22/22)   IGHD3-22*01  4    -------------------------------------------------------------------------------...........  14

                                      IMGT--------------------->                                  
                                      S  S  G  Y  N  A  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_465    271  GTAGTGGTTATAATGCTTTTGATATCTGGGGCCAAGGGACATTGGTCACCGTCTCTTCAG  330
D  100.0% (22/22)   IGHD3-22*01  15   ...........-------------------------------------------------  25
J  97.9% (47/48)    IGHJ3*02     3    ------------.............................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_4981

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ2*01                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTTGGGCAGTATC	CTATGGTTCGGGGAGTTA	GGTTCGC	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACTTGGGCAGTATCCTATGGTTCGGGGAGTTAGGTTCGCGGTACTTCGATCTC	AKDLGSILWFGELGSRYFDL	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  Y  A  M  D  W  V  R  Q  P  P  G  K  G  L  
                    Query_466    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACTATGCCATGGACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ..........................................G..G..........AG.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  R  G  D  N  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_466    91   AGTGGGTCTCAGCAATTAGTGGTCGTGGTGATAACACATTTTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  .............T.........A......G..G.....AC.................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  S  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  L  G  S  I  L  W  
                    Query_466    181  AGAGTACGCTGTATCTGCAAATGGACAGCCTGAGAGCCGAAGACACGGCCGTATATTACTGTGCGAAAGACTTGGGCAGTATCCTATGGT  270
V  94.0% (235/250)  IGHV3-23*01  227  ...AC..................A................G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (18/18)   IGHD3-10*01  7    -----------------------------------------------------------------------------------.......  13

                                      R3-IMGT------------------------>                                  
                                      F  G  E  L  G  S  R  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_466    271  TCGGGGAGTTAGGTTCGCGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  336
D  100.0% (18/18)   IGHD3-10*01  14   ...........-------------------------------------------------------  24
J  100.0% (48/48)   IGHJ2*01     6    ------------------................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_234792

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATGATC	GTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATCGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDRGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_467    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAGTTA  90
V  94.5% (275/291)  IGHV5-51*01  6    .................................................................G.....................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  I  M  Y  P  D  D  S  D  I  R  Y  S  P
                    Query_467    91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATCGGGATCATGTATCCTGATGACTCTGATATCAGATACAGCCC  180
V  94.5% (275/291)  IGHV5-51*01  96   ........G.......................................G........C.......G...........C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  G  T  A  Y  L  Q  W  R  S  R  R  A  S  D  P  A
                    Query_467    181  GTCTTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCGGCACCGCCTACCTGCAGTGGAGGAGCCGGAGGGCCTCGGACCCCGC  270
V  94.5% (275/291)  IGHV5-51*01  186  ...C...C...................................A......................C....T..A..........A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  F  C  A  R  H  G  D  D  R  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  P  G  T  T  V
                    Query_467    271  CATATATTTCTGTGCGAGACATGGGGATGATCGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCCGGGGACCACGGT  360
V  94.5% (275/291)  IGHV5-51*01  276  ...G....A............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  90.9% (10/11)    IGHD1-26*01  7    --------------------------------.......C...-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------.......A.......................AA...........  49

                                                   
                                        T  V  S  S 
                    Query_467    361  CACCGTCTCCTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_234793

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_468    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ........................................G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_468    91   TGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ........G...A..T...............................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y 
                    Query_468    181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............C....C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  F  S  S  
                    Query_468    271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCTTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    .................................G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_234791

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         392     2e-111
IGHD5-12*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCACAG	TAGTGGCCACG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGACTTCACAGTAGTGGCCACGACTACTTTGACTAC	TRLHSSGHDYFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  R  I  S  C  E  G  S  G  Y  T  F  A  T  Y
                    Query_469      1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGCAGTCTCTGAGGATCTCCTGTGAGGGTTCTGGATACACCTTCGCCACCTA  90
V  93.4% (270/289)  IGHV5-10-1*01  6    ........................................G....................A...............G...TA...G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  K  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_469      91   TTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAAGATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  93.4% (270/289)  IGHV5-10-1*01  96   C..................................................G.G....................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  T  D  N  S  I  T  T  A  Y  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_469      181  GTCCTTCCAAGGCCACGTCACCATCTCAACTGACAATTCCATCACCACTGCCTACCTGCAATGGAACAGTCTGAAGGCCTCGGACACAGC  270
V  93.4% (270/289)  IGHV5-10-1*01  186  ............................G.......G.......G...............G....G...C.................C..  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          M  Y  Y  C  T  R  L  H  S  S  G  H  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_469      271  CATGTATTATTGCACGAGACTTCACAGTAGTGGCCACGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  93.4% (270/289)  IGHV5-10-1*01  276  .........C..TG.....-------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                    
D  90.9% (10/11)    IGHD5-12*01    8    ---------------------------.......T...------------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02       1    --------------------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_234796

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            315     5e-88
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GAGCAG	GCAGTGGCT	CAAC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGAGCAGGCAGTGGCTCAACCTTTGCCTAC	ATGAGSGSTFAY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	225	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  E  F  V  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_470    1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGAATTCGTCTTCAGTTCTTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (225/249)  IGHV3-7*01   47   .....................C........G....AC...T...AGC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_470    91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAACACTATGCGGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACCCCA  180
V  90.4% (225/249)  IGHV3-7*01   137  ......................................T......T......T.................................G...  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  T  S  L  Y  L  Q  M  N  F  L  R  G  D  D  S  A  V  Y  Y  C  A  T  G  A  G  S  G  S  T  
                    Query_470    181  AGACTTCACTATATCTGCAAATGAATTTCCTGAGAGGTGACGACTCGGCTGTGTACTACTGTGCGACAGGAGCAGGCAGTGGCTCAACCT  270
V  90.4% (225/249)  IGHV3-7*01   227  ...AC.....G..............CAG........CC..G...A..........T..........G..---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-19*01  8    ---------------------------------------------------------------------------.........------  16
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_470    271  TTGCCTACTGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  312
J  95.5% (42/44)    IGHJ4*02     7    ...A..................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_234797

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAGGG	AGTAGTGGTTATT	TTAGCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAGGGAGTAGTGGTTATTTTAGCCTC	ARRGSSGYFSL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  K  G  S  D  F  S  F  A  R  N
                    Query_471    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGATTTCAGTTTTGCCAGGAA  90
V  94.8% (275/290)  IGHV5-51*01  6    ..........................................G............................GA.A...C...A....CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  H  D  S  D  T  R  Y  S  P
                    Query_471    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTAGAGTGGATGGGGAACATCTATCCTCATGACTCTGATACCAGATACAGCCC  180
V  94.8% (275/290)  IGHV5-51*01  96   .......................................G.............T..........GG........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  T  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_471    181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (275/290)  IGHV5-51*01  186  ...................................A.................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        M  Y  Y  C  A  R  R  G  S  S  G  Y  F  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_471    271  CATGTATTATTGTGCGAGACGAGGGAGTAGTGGTTATTTTAGCCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  94.8% (275/290)  IGHV5-51*01  276  .........C..........------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (13/13)   IGHD3-22*01  14   -------------------------.............------------------------------------------  26
J  100.0% (35/35)   IGHJ4*02     14   ---------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_234794

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           277     9e-77
IGHD2-15*01                                                                                           12.2    34   
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTC	ATTGTA	T	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTCATTGTATTACGGTATGGACGTC	ARGVADDGWRGGRRVSLYYGMDV	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	211	34	0	86.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  H  C  W  T  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_472    1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTTAGTGGTCACTGCTGGACCTGGATTCGCCAGACACCAGGGAAGGGACTGGAA  90
V  86.1% (211/245)  IGHV4-34*01  49   ......................................C......T...A.....G......C......C.C...........G.....G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  M  N  H  K  G  R  T  T  Y  N  P  S  L  M  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_472    91   TGGATTGGTGAGATGAATCACAAAGGCAGGACGACCTACAACCCGTCGCTAATGAGTCGAGTCACCATCTCAGTGGACACGTCCAAGAAT  180
V  86.1% (211/245)  IGHV4-34*01  139  ........G..A..C.....T.GT..A..C..C.A............C..C.A...............A.....A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  L  S  L  R  L  T  S  L  I  A  A  D  T  A  M  Y  Y  C  A  R  G  V  A  D  D  G  W  R  G 
                    Query_472    181  CAGCTCTCCCTGAGATTGACCTCTTTAATCGCCGCGGACACGGCTATGTATTACTGTGCGAGAGGCGTGGCGGATGACGGGTGGCGGGGG  270
V  86.1% (211/245)  IGHV4-34*01  229  ...T.........AGC...G....G.G.C................G...................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      3-IMGT----------------------------->                                 
                                       G  R  R  V  S  L  Y  Y  G  M  D  V  W  G  Q  G  V  T  V  P  V  S  S 
                    Query_472    271  GGCAGACGCGTGTCATTGTATTACGGTATGGACGTCTGGGGCCAGGGAGTCACGGTCCCCGTCTCCTCA  339
D  100.0% (6/6)     IGHD2-15*01  6    --------------......-------------------------------------------------  11
J  89.6% (43/48)    IGHJ6*02     15   ---------------------.......................A..GAC.......A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_151833

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            21.8    0.041
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGACACCTCGAGA	TTTGGAGTGGT	CAA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACACCTCGAGATTTGGAGTGGTCAAGATGCTTTTGATACC	ARHLEIWSGQDAFDT	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_473    1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCATCTTTAGCAACTACGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (228/245)  IGHV3-23*01  47   ....................G...............C........G...T.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  F  G  V  R  G  V  A  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_473    91   AGTGGGTCTCAACTTTTGGTGTTAGAGGTGTTGCCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (228/245)  IGHV3-23*01  137  ...........G..A..A...G...T....G.AG........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  H  L  E  I  W  S  G  
                    Query_473    181  AGAACACCCTTTATCTGCAAATGCACAGCCTGAGAGCCGAGGACACGGCCGTATATTATTGTGCGCGACACCTCGAGATTTGGAGTGGTC  270
V  93.1% (228/245)  IGHV3-23*01  227  .......G..G............A..................................C......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD3-3*01   12   ------------------------------------------------------------------------------...........-  22

                                      ---------------->                                  
                                      Q  D  A  F  D  T  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_473    271  AAGATGCTTTTGATACCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  98.0% (48/49)    IGHJ3*02     2    --.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_151832

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            380     1e-107
IGHD3-22*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTG	ATTACTATGATAGTAGTGGTTA	CCCA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTGATTACTATGATAGTAGTGGTTACCCAGACTAC	ASLDYYDSSGYPDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	114	0	0	100
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	244	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_474    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  99.6% (244/245)  IGHV4-4*02   49   ..............................................G...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_474    91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  99.6% (244/245)  IGHV4-4*02   139  ..........................................................................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  D  Y  Y  D  S  S  G 
                    Query_474    181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGCCTTGATTACTATGATAGTAGTGGT  270
V  99.6% (244/245)  IGHV4-4*02   229  .................................................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (22/22)   IGHD3-22*01  3    ----------------------------------------------------------------------....................  22

                                      ----------->                                  
                                       Y  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_474    271  TACCCAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (22/22)   IGHD3-22*01  23   ..--------------------------------------------  24
J  100.0% (40/40)   IGHJ4*02     9    ------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_151831

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           346     2e-97
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AC	ATTACGATTTTTCGAGTGGT	CTCATTATCGGAAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACATTACGATTTTTCGAGTGGTCTCATTATCGGAACTGACTAC	AREHYDFSSGLIIGTDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  R  G  S  Y  Y  W  S  W  N  R  Q  S  P  G  K  G 
                    Query_475    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGAGGTTCTTACTACTGGAGTTGGAACCGGCAGTCCCCAGGGAAGGGA  90
V  94.0% (236/251)  IGHV4-61*01  49   .........................................C..T...AG............C....T.......C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  H  S  G  S  T  N  Y  H  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_475    91   CTGGAGTGGATTGGGTATATTTATCACAGTGGGAGCACCAACTATCACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCC  180
V  94.0% (236/251)  IGHV4-61*01  139  ....................C...T...................CA................................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  H  Y  D  F  S  S 
                    Query_475    181  AAGAACCAGTTCTCCCTGAAGCTGAATTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGAACATTACGATTTTTCGAGT  270
V  94.0% (236/251)  IGHV4-61*01  229  .........................GC..........................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-3*01   3    -------------------------------------------------------------------------............G....  19

                                      MGT-------------------->                                  
                                       G  L  I  I  G  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_475    271  GGTCTCATTATCGGAACTGACTACTGGGGCCAGGGTACCCTGGTCACCGTCTCCTCAG  328
D  95.0% (19/20)    IGHD3-3*01   20   ...-------------------------------------------------------  22
J  97.6% (40/41)    IGHJ4*02     8    -----------------..................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_151830

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            377     9e-107
IGHD1-26*01                                                                                           14.1    8.9   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCG	GTGGGAG	TCACCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATGCGGTGGGAGTCACCCCCTACTTTGACTAC	ARDAVGVTPYFDY	270	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	47	47	46	1	0	97.9
CDR1-IMGT	48	77	30	26	4	0	86.7
FR2-IMGT	78	128	51	50	1	0	98
CDR2-IMGT	129	155	27	26	1	0	96.3
FR3-IMGT	156	269	114	103	11	0	90.4
CDR3-IMGT (germline)	270	277	8	8	0	0	100
Total	N/A	N/A	277	259	18	0	93.5


Alignments

                                      <------------------FR1-IMGT-------------------><----------CDR1-IMGT---------><------------
                                         L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  L  V  S  R  N  G  A  A  W  N  W  I  
                    Query_476    1    GACTGGTGAAGCCCTCGCAGACCCTCTCACTCACATGTGCCATCTCCGGGGACCTTGTCTCTAGGAACGGTGCTGCTTGGAATTGGATCA  90
V  93.5% (259/277)  IGHV6-1*01   29   ..................................C..................AG.........C...A.............C.......  118
                                         L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  

                                      --------FR2-IMGT---------------------><--------CDR2-IMGT--------><------------------------
                                      R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  L  R  G  
                    Query_476    91   GGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATATTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTCTGAGAGGTC  180
V  93.5% (259/277)  IGHV6-1*01   119  ...........................................C....................................G...A.A...  208
                                      R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  

                                      ----------------------------FR3-IMGT----------------------------------------------------><
                                      R  I  I  I  S  P  D  T  S  N  N  L  F  S  L  H  L  N  S  V  T  P  E  D  T  A  M  Y  Y  C  
                    Query_476    181  GAATAATCATCAGCCCAGACACTTCCAACAACCTCTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTATGTATTACTGTG  270
V  93.5% (259/277)  IGHV6-1*01   209  ......C.....A.........A.....G....AG...........G..............................G............  298
                                      R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  

                                      --------------CDR3-IMGT-------------->                                  
                                      A  R  D  A  V  G  V  T  P  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_476    271  CAAGAGATGCGGTGGGAGTCACCCCCTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  342
V  93.5% (259/277)  IGHV6-1*01   299  .......-----------------------------------------------------------------  305
                                      A  R                                                                    
D  100.0% (7/7)     IGHD1-26*01  7    -----------.......------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    -------------------------.........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_151837

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           361     5e-102
IGHD3-16*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CACTCAATCGAGGACTCCG	TGCTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACTCAATCGAGGACTCCGTGCTTATTACTTTGATCAT	ATLNRGLRAYYFDH	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	259	28	0	90.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  R  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  A  T  H
                    Query_477    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGAGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACAGTTTTGCCACACA  90
V  90.2% (259/287)  IGHV5-51*03  6    ..............................A......G............................T...........C...A...GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  T  D  S  E  T  H  Y  S  P
                    Query_477    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTACTGACTCTGAAACCCACTACAGCCC  180
V  90.2% (259/287)  IGHV5-51*03  96   ............................................................T...GG.........T...AGA........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  R  S  I  T  T  A  Y  L  Q  W  N  T  L  G  A  S  D  T  A
                    Query_477    181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACAGATCCATCACTACCGCCTACCTGCAGTGGAACACATTGGGGGCCTCGGACACCGC  270
V  90.2% (259/287)  IGHV5-51*03  186  ........A..........................AG.......GC...................G..GCC..AA...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  T  L  N  R  G  L  R  A  Y  Y  F  D  H  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_477    271  CATATATTACTGCGCGACACTCAATCGAGGACTCCGTGCTTATTACTTTGATCATTGGGGCCAGGGAACCCTGGTCCCAGTCTCCTCAG  359
V  90.2% (259/287)  IGHV5-51*03  276  ...G........T....------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                          
D  100.0% (7/7)     IGHD3-16*01  28   ------------------------------------.......----------------------------------------------  34
J  89.1% (41/46)    IGHJ4*02     3    -------------------------------------------........CT.C.....................A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_151836

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTAGGATCCCGAAAAATCT	CTATGATAATAGTGGTTACTACT	TTTTCGCCTTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAGGATCCCGAAAAATCTCTATGATAATAGTGGTTACTACTTTTTCGCCTTTTTTGAATCC	ARLRIPKNLYDNSGYYFFAFFES	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_478    1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.5% (232/243)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  L  V  D  T  S  R  D 
                    Query_478    91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTTGGTGGACACGTCCAGGGAC  180
V  95.5% (232/243)  IGHV4-34*01  139  ....................................................................A.CA..A..........A.A..  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  R  I  P  K  N  L  Y  D 
                    Query_478    181  CAGTTCTCCCTAAAGTTGAGCTCTGTGACCGCCGCAGACACGGCTCTGTATTACTGTGCGAGACTTAGGATCCCGAAAAATCTCTATGAT  270
V  95.5% (232/243)  IGHV4-34*01  229  ...........G...C...................G.........G.................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.3% (21/23)    IGHD3-22*01  7    -----------------------------------------------------------------------------------.......  13

                                      3-IMGT----------------------------->                                  
                                       N  S  G  Y  Y  F  F  A  F  F  E  S  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_478    271  AATAGTGGTTACTACTTTTTCGCCTTTTTTGAATCCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  340
D  91.3% (21/23)    IGHD3-22*01  14   .G.........T....------------------------------------------------------  29
J  93.0% (40/43)    IGHJ4*02     6    ---------------------------.....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_151835

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           286     1e-79
IGHD3-16*02                                                                                           14.1    8.6  
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGACGCT	GGAGTAATCG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGACGCTGGAGTAATCGACTACTACGGTATGGACGTC	AREDAGVIDYYGMDV	250	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	135	27	18	3	6	66.7
FR3-IMGT	136	249	114	94	20	0	82.5
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	222	29	6	86.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  S  Y  Y  W  T  W  I  R  Q  R  P  G  K  G 
                    Query_479    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGTGGTTCTTACTACTGGACGTGGATCCGCCAGCGCCCAGGGAAGGGC  90
V  86.4% (222/257)  IGHV4-31*03  49   ...............................G................GG...........GC.............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  N  N  R  G  S  P  D  F  N  P  S  L  M  G  R  T  V  I  S  L  D 
                    Query_479    91   CTGGAGTGGATTGGGTACATCTATAACAATAATAGAGGGAGCCCCGACTTCAATCCGTCCCTCATGGGTCGGACTGTCATCTCTCTAGAC  180
V  86.4% (222/257)  IGHV4-31*03  139  ........................T..------..T......A..T...A...C..........A.A....AGT.AC...A..AG.....  222
                                       L  E  W  I  G  Y  I  Y  Y        S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-----------------CDR
                                       T  S  N  N  L  F  Y  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  E  D  A  G  V 
                    Query_479    181  ACTTCTAATAACCTGTTCTACCTGAGGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGAGGACGCTGGAGTA  270
V  86.4% (222/257)  IGHV4-31*03  223  ..G.....G....A.....C.....A.....G................................A............-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  90.0% (9/10)     IGHD3-16*02  21   ------------------------------------------------------------------------------------.....T  26

                                      3-IMGT----------------->                                 
                                       I  D  Y  Y  G  M  D  V  W  G  Q  G  I  T  V  T  V  S  S 
                    Query_479    271  ATCGACTACTACGGTATGGACGTCTGGGGCCAAGGGATCACGGTCACCGTCTCCTCA  327
D  90.0% (9/10)     IGHD3-16*02  27   ....-----------------------------------------------------  30
J  98.1% (52/53)    IGHJ6*02     10   ----.................................C...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_151834

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           406     1e-115
IGHD5-18*01                                                                                           14.1    9.5   
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGAG	TACATCTATG	CCTCGGGCGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGAGTACATCTATGCCTCGGGCGGACTGGGTCGACCAC	ARDRSTSMPRADWVDH	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  I  S  Y 
                    Query_480    2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTTATCAGTTAT  91
V  94.8% (275/290)  IGHV1-18*01  7    ............................A....................................T................C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  T  Y  N  A  N  T  N  S  A  Q 
                    Query_480    92   GGTATCAGCTGGGTGCGACAGGCCCCCGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCTACAATGCCAACACAAACTCTGCACAG  181
V  94.8% (275/290)  IGHV1-18*01  97   ..........................T...............................G.G.T.......GT..........A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  I  T  M  T  T  D  T  S  T  S  A  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_480    182  AACCTCCAGGGCAGAATCACCATGACCACAGACACATCCACGAGCGCAGCCTACATGGAACTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (275/290)  IGHV1-18*01  187  ..G............G.............................A.............G..............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  D  R  S  T  S  M  P  R  A  D  W  V  D  H  W  G  Q  G  T  L  V  T  V  S 
                    Query_480    272  GTGTATTACTGTGCGAGAGATCGGAGTACATCTATGCCTCGGGCGGACTGGGTCGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  361
V  94.8% (275/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD5-18*01  6    --------------------------....G.....------------------------------------------------------  15
J  95.8% (46/48)    IGHJ5*02     4    ----------------------------------------------.....T......C...............................  47

                                          
                                       S  
                    Query_480    362  TCAG  365
J  95.8% (46/48)    IGHJ5*02     48   ....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_151839

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           367     6e-104
IGHD3-22*01                                                                                           50.7    9e-11 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCGCAATG	GTATTACTATGATAGTAGTGGTTATT	TA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCGCAATGGTATTACTATGATAGTAGTGGTTATTTAGACTAC	ARAQWYYYDSSGYLDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	241	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_481    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTAACTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  97.6% (241/247)  IGHV3-64*01  47   .....................................C.......G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  G  P  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_481    91   AATATGTTTCAGCTATTGGTCCTAATGGGGGTAGCACATATTATGCAAACTCTGTGAAGGGCAGATTGACCATCTCCAGAGACAATTCCA  180
V  97.6% (241/247)  IGHV3-64*01  137  .................A..AG.............................................C......................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R  A  Q  W  Y  Y  Y  D  
                    Query_481    181  AGAACACGCTGTATCTTCAAATGGGCAGCCTGAGAGCTGAGGACATGGCTGTGTATTACTGTGCGAGGGCGCAATGGTATTACTATGATA  270
V  97.6% (241/247)  IGHV3-64*01  227  ...................................................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A                          
D  100.0% (26/26)   IGHD3-22*01  1    ----------------------------------------------------------------------------..............  14

                                      T------------------>                                  
                                      S  S  G  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_481    271  GTAGTGGTTATTTAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (26/26)   IGHD3-22*01  15   ............------------------------------------------  26
J  100.0% (40/40)   IGHJ4*02     9    --------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_151838

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           363     1e-102
IGHD6-19*01                                                                                           16.1    2.2   
IGHJ3*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAGGAGGGGGG	TAGCAGTG	CCGGC	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAGGAGGGGGGTAGCAGTGCCGGCGCTTTTGATATC	ARDKEGGSSAGAFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_482    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-21*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  *  V  S  S  I  T  S  S  S  D  Y  I  S  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_482    91   AGTGAGTCTCATCCATTACTAGTAGTAGTGATTACATATCCTACGCAGCCTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (241/250)  IGHV3-21*01  137  ....G.............G..........AG........A........A.........................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  K  E  G  G  S  S  
                    Query_482    181  AGAACTCACTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATAAGGAGGGGGGTAGCAGTG  270
V  96.4% (241/250)  IGHV3-21*01  227  ..........G...........................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  6    ----------------------------------------------------------------------------------........  13

                                      ---------------->                                  
                                      A  G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_482    271  CCGGCGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  100.0% (46/46)   IGHJ3*02     5    -----..............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_194704

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           333     1e-93
IGHD3-9*01                                                                                            44.9    5e-09
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGCCCTGA	ATTACGATATTTTCACTGGTTATTAT	TC	TGAGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGCCCTGAATTACGATATTTTCACTGGTTATTATTCTGAGTAC	VALNYDIFTGYYSEY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_483    1    GGTCCCTGAGACTCTCCTGTGCAACGTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCTGGCAAGGGGCTGG  90
V  93.8% (228/243)  IGHV3-33*01  47   .......................G.....................G..............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  W  H  D  G  S  K  R  Y  Y  A  D  F  V  K  G  R  F  T  I  S  R  D  E  S  
                    Query_483    91   AGTGGGTGTCAGTTATATGGCATGATGGAAGTAAAAGATACTATGCAGACTTCGTGAAGGGCCGATTCACCATCTCCAGAGACGAGTCCA  180
V  93.8% (228/243)  IGHV3-33*01  137  ........G...........T.............T.A..............C...............................A.T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  S  A  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  V  A  L  N  Y  D  I  F  T  
                    Query_483    181  AGAGCGCACTGTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCTGTCTATTACTGTGTGGCCCTGAATTACGATATTTTCACTG  270
V  93.8% (228/243)  IGHV3-33*01  227  ...A.A.G............................C...............G..........---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  96.2% (25/26)    IGHD3-9*01   3    ------------------------------------------------------------------------.............G....  20

                                      ---------------->                                  
                                      G  Y  Y  S  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_483    271  GTTATTATTCTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  96.2% (25/26)    IGHD3-9*01   21   ........-------------------------------------------  28
J  97.6% (40/41)    IGHJ4*02     8    ----------...C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_110003

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            352     3e-99
IGHD6-19*01                                                                                           21.8    0.039
IGHJ4*01                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	N/A	GCAGTGGCTGG	CTGTCGGAGTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ATGGGAGGCAGTGGCTGGCTGTCGGAGTTC	MGGSGWLSEF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	4	3	0	57.1
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  S  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_484    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACCTTTAATTCCTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-7*01   47   ...............................A..........G.AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  H  Q  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_484    91   AGTGGGTGGCCAACATACACCAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (237/249)  IGHV3-7*01   137  .................A.G..................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  M  G  G  S  G  W  L  S  E  
                    Query_484    181  AGAACTCACTGTATCTGCAAATGAACACCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTATGGGAGGCAGTGGCTGGCTGTCGGAGT  270
V  95.2% (237/249)  IGHV3-7*01   227  ...........................G..................................GC.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-19*01  8    ---------------------------------------------------------------------...........----------  18

                                      ->                                  
                                      F  W  G  H  G  T  L  V  T  V  S  S  
                    Query_484    271  TCTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.1% (34/35)    IGHJ4*01     14   -.........A.........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_35392

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           396     2e-112
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGAC	GTATTACTATGATACTGATAATTATTACTAC	GGCCCCTGTTTA	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGACGTATTACTATGATACTGATAATTATTACTACGGCCCCTGTTTAGACTTC	ARDRTYYYDTDNYYYGPCLDF	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N  N  H
                    Query_485    1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGGGGCACCTTCAACAATCA  90
V  93.5% (272/291)  IGHV1-69*01  6    ..................G...............................................T.....A..........G..GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  M  F  A  T  A  S  Y  A  Q
                    Query_485    91   TGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGCCTTGAGTGGATGGGAGGGATCATCCCTATGTTTGCTACAGCAAGTTACGCACA  180
V  93.5% (272/291)  IGHV1-69*01  96   ........G...........................G.............................C....G........AC........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  V  Y  M  E  L  T  R  L  R  S  E  D  T  A
                    Query_485    181  GAACTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACGGTCTACATGGAGCTGACCAGACTGAGATCTGAGGACACGGC  270
V  93.5% (272/291)  IGHV1-69*01  186  ...G............................................A.C..............G...C....................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        V  Y  Y  C  A  R  D  R  T  Y  Y  Y  D  T  D  N  Y  Y  Y  G  P  C  L  D  F  W  G  Q  G  T
                    Query_485    271  CGTCTATTACTGTGCGAGAGATAGGACGTATTACTATGATACTGATAATTATTACTACGGCCCCTGTTTAGACTTCTGGGGCCAGGGAAC  360
V  93.5% (272/291)  IGHV1-69*01  276  ...G.................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  83.9% (26/31)    IGHD3-22*01  1    ---------------------------..............G.AG.GG..........--------------------------------  31
J  97.5% (39/40)    IGHJ4*02     9    ----------------------------------------------------------------------....A...............  28

                                                          
                                        L  V  T  V  S  S  
                    Query_485    361  CCTGGTCACCGTCTCCTCAG  380
J  97.5% (39/40)    IGHJ4*02     29   ....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_194705

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_486    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_486    91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_486    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_486    271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_194702

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           431     4e-123
IGHD5-12*01                                                                                           16.1    2.6   
IGHJ2*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAC	GGATGGGAGA	TGGCTACAATT	TTGTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACGGATGGGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTC	ATRMGDGYNFVDWYFDL	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	73	1	0	98.6
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	296	7	6	1	0	85.7
Total	N/A	N/A	294	285	9	0	96.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  N  F  A  
                    Query_487    3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAACTTTGCCA  92
V  96.9% (285/294)  IGHV5-51*01  2    .....................................................................G...........G....A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_487    93   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACA  182
V  96.9% (285/294)  IGHV5-51*01  92   ....................................................................................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  H  W  S  S  L  Q  A  S  D  
                    Query_487    183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCACTGGAGTAGCCTCCAGGCCTCGGACA  272
V  96.9% (285/294)  IGHV5-51*01  182  ................................................................G.....C.....GA............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  M  Y  Y  C  A  T  R  M  G  D  G  Y  N  F  V  D  W  Y  F  D  L  W  G  R  G  A  L  V  
                    Query_487    273  CCGCCATGTATTACTGTGCGACACGGATGGGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTCTGGGGCCGTGGCGCCCTGGTCA  362
V  96.9% (285/294)  IGHV5-51*01  272  .....................G..------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  90.9% (10/11)    IGHD5-12*01  11   ----------------------------------.......G...---------------------------------------------  21
J  98.0% (50/51)    IGHJ2*01     3    ---------------------------------------------------.............................A.........  41

                                                  
                                      T  V  S  S  
                    Query_487    363  CTGTCTCCTCAG  374
J  98.0% (50/51)    IGHJ2*01     42   ............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_194703

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_488   1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01  49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_488   91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01  139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_488   181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01  229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01  13   ----------------------------------------------------------------------.....C..G...--------  24

                                     ----------->                                  
                                      G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_488   271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02    6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_155550

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           318     5e-89
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  P  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_489    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACCCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*02  49   ...............................G.T........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_489    91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.4% (224/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_489    181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.4% (224/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_489    271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_194700

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_490    1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_490    91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_490    181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_490    271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_155551

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         360     1e-101
IGHD5-18*01                                                                                           14.1    8.6   
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GAAG	ACAGATATGG	GGGACTTTGGACCTGCAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAAGACAGATATGGGGGACTTTGGACCTGCATTACTTTGACTTC	ARGRQIWGTLDLHYFDF	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_491      1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  F  Y  N  T  E  T  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  D  R  S 
                    Query_491      91   CTGGAGTGGATTGGATACTTCTATAATACTGAGACCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCACTAGACAGGTCC  180
V  96.0% (240/250)  IGHV4-30-2*01  139  ..............G...A.....C...G..G..G.......................A...................G...........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  Q  I  W  G  T 
                    Query_491      181  AAGAACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAAGACAGATATGGGGGACT  270
V  96.0% (240/250)  IGHV4-30-2*01  229  ...................A......C...........................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD5-18*01    7    --------------------------------------------------------------------------....C.....------  16

                                        MGT-------------------->                                  
                                         L  D  L  H  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_491      271  TTGGACCTGCATTACTTTGACTTCTGGGGCCAGGGCACCCTCGTCACCGTCTCCTCAG  328
J  93.5% (43/46)    IGHJ4*02       3    ------------..........A............A.....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_166546

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           400     9e-114
IGHD2-15*01                                                                                           10.3    137   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-15*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCG	GCTGC	AACACAAATAGCGTATTT	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGGCTGCAACACAAATAGCGTATTTCGGTATGGACGTC	ARDPAATQIAYFGMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_492    2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAATTAT  91
V  94.1% (273/290)  IGHV1-18*01  7    .....................................................................................GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  T  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  D  T  K  Y  A  * 
                    Query_492    92   GGTATCACCTGGGTGCGACAGACCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGTGGTTACAATGGTGACACAAAGTATGCATAG  181
V  94.1% (273/290)  IGHV1-18*01  97   .......G.............G.....................................C.C..........A.......C......C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  F  Q  G  R  V  T  M  T  T  D  T  S  T  T  T  A  Y  L  D  L  R  S  L  R  S  D  D  T  A 
                    Query_492    182  AGGTTCCAGGGCAGAGTCACCATGACTACAGACACATCCACGACCACAGCCTATCTGGACCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.1% (273/290)  IGHV1-18*01  187  .A.C......................C................G.........CA....G..............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  D  P  A  A  T  Q  I  A  Y  F  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_492    272  GTATATTACTGTGCGAGAGATCCGGCTGCAACACAAATAGCGTATTTCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  361
V  94.1% (273/290)  IGHV1-18*01  277  ..G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (5/5)     IGHD2-15*01  21   ------------------------.....-------------------------------------------------------------  25
J  100.0% (46/46)   IGHJ6*02     17   -----------------------------------------------...........................................  59

                                         
                                       S 
                    Query_492    362  TCA  364
J  100.0% (46/46)   IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_155552

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           307     1e-85
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAC	TATTATCATGGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTATTATCATGGTTCGGGGAGTTATTTTGACTTC	ARGHYYHGSGSYFDF	250	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	33	33	27	0	6	81.8
CDR1-IMGT	34	63	30	25	5	0	83.3
FR2-IMGT	64	114	51	45	6	0	88.2
CDR2-IMGT	115	135	21	21	0	0	100
FR3-IMGT	136	249	114	103	11	0	90.4
CDR3-IMGT (germline)	250	256	7	7	0	0	100
Total	N/A	N/A	256	228	22	6	89.1


Alignments

                                      <-----------FR1-IMGT------------><----------CDR1-IMGT---------><--------------------FR2-IM
                                       T  L  S  L  T  C  T  V  T  F  S  R  G  S  I  S  S  G  G  S  F  W  E  W  I  R  Q  H  P  G 
                    Query_493    1    ACCCTGTCCCTCACCTGCACTGTCACTTTCTCTCGTGGCTCCATTAGCAGTGGCGGTTCCTTCTGGGAATGGATCCGCCAGCACCCAGGG  90
V  89.1% (228/256)  IGHV4-31*03  49   ........................------...G..........C........T....A..A....AGC.....................  132
                                       T  L  S  L  T  C  T  V        S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  G  L  G  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  V  D 
                    Query_493    91   AAGGGGCTGGGGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCCGGAGTCGACTTACCATATCAGTGGAC  180
V  89.1% (228/256)  IGHV4-31*03  133  .....C....A..........T.........................................AA.......G.............A...  222
                                       K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-----------------CDR
                                       T  S  K  N  Q  L  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  Y  Y  H 
                    Query_493    181  ACGTCTAAGAATCAATTGTCCCTGAGGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTATTGTGCGAGAGGCCACTATTATCAT  270
V  89.1% (228/256)  IGHV4-31*03  223  ...........C..G..C.......A......C..........................G.....C..........--------------  298
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  91.7% (22/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------------.....CT..  10

                                      3-IMGT----------------->                                  
                                       G  S  G  S  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_493    271  GGTTCGGGGAGTTATTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  91.7% (22/24)    IGHD3-10*01  11   ...............-------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_111947

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           363     1e-102
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CAC	TATTCCTATGGTTCGAGGAGT	GCTTGACCTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACACTATTCCTATGGTTCGAGGAGTGCTTGACCTT	AKDTIPMVRGVLDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  S  S  H  A  M  S  W  A  R  Q  A  P  G  K  G  L  
                    Query_494    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTAGCAGCCATGCCATGAGCTGGGCCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-23*01  47   ................................T..............T...............T..........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_494    91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGGCACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  96.4% (241/250)  IGHV3-23*01  137  ...............................T.G...................................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  H  M  S  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  D  T  I  P  M  V  R  
                    Query_494    181  AGAACACGCTGTATCTGCACATGAGCAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGACACTATTCCTATGGTTCGAG  270
V  96.4% (241/250)  IGHV3-23*01  227  ...................A....A.........................G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.5% (19/21)    IGHD3-10*01  2    -------------------------------------------------------------------------....A..........G.  18

                                      ------------->                                  
                                      G  V  L  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_494    271  GAGTGCTTGACCTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  90.5% (19/21)    IGHD3-10*01  19   ....--------------------------------------------  22
J  100.0% (34/34)   IGHJ4*02     15   --------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_111946

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         386     1e-109
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCTTAAGGTCAATCGCGTC	CAGTGGCTGG	GCGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCA	ARHPLRSIASSGWAS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_495      1    GCAGCTGGTGCAGTCTGGAGGAGAGGTGAAGAAGCCCGGGGAGTCTTTGAGGATTTCCTGTAAGGCTTCTGGATACACCTTTACCAACTA  90
V  92.7% (268/289)  IGHV5-10-1*01  6    ....................C.........A...............C.......C..........G...........G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  R  Y  S  P
                    Query_495      91   CTGGATCAGCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGACCCTAGTGACTCTTATACCCGCTACAGTCC  180
V  92.7% (268/289)  IGHV5-10-1*01  96   ......................A.....................................T..................AA......C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  D  G  N  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  M  A  S  D  T  A
                    Query_495      181  GTCCTTCGACGGCAACGTCACCATCTCAGTTGACAAGTCCATCAGTACTGCCTATTTGCAGTGGAGCAGCCTGATGGCCTCGGACACCGC  270
V  92.7% (268/289)  IGHV5-10-1*01  186  .......C.A...C...............C...............C........CC..................A...............  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          M  Y  Y  C  A  R  H  P  L  R  S  I  A  S  S  G  W  A  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_495      271  CATGTATTATTGTGCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCATGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  92.7% (268/289)  IGHV5-10-1*01  276  .........C.........-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD6-19*01    9    ------------------------------------------..........--------------------------------------  18
J  100.0% (34/34)   IGHJ4*02       15   ----------------------------------------------------------................................  46

                                          
                                          
                    Query_495      361  AG  362
J  100.0% (34/34)   IGHJ4*02       47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_111944

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_496    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  95.8% (277/289)  IGHV5-51*03  6    ...............................A..............................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  G  P
                    Query_496    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCCGATACCACATACGGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   ...................................................G....................T.......G....A....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_496    181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAATACCGCCTACCTGCAGTGGAGTAGCCTGCAGGCCTCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  ............................................GC....................C......A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_496    271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGTCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.8% (277/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    ------------------------------------------............C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_111943

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           329     3e-92
IGHD2-15*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAGTCTGGACC	TGGTGGTA	ACATC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGAGTCTGGACCTGGTGGTAACATCGACTAC	RDMSLDLVVTSTT	245	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	109	51	48	2	1	94.1
CDR2-IMGT	110	130	21	20	1	0	95.2
FR3-IMGT	131	244	114	108	6	0	94.7
CDR3-IMGT (germline)	245	252	8	8	0	0	100
Total	N/A	N/A	250	232	17	1	92.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  I  S  S  S  S  Y  Y  W  G  W  V  R  Q  P   Q  G  R  G 
                    Query_497    4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTCCATCAGCAGTAGTTCTTACTACTGGGGCTGGGTCCGCCAGCCCC-AGGGAAGGGGC  92
V  92.8% (232/250)  IGHV4-39*01  50   .....TCC...A....C.............G................AG................A............C...........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                       W  S  G  L  A  V  S  I  I  V  G  A  P  T  T  S  R  P  S  R  V  E  S  P  Y  P  *  T  R  P 
                    Query_497    93   TGGAGTGGATTGGCAGTATCTATTATAGTGGGAGCGCCTACTACAAGTCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGGCCA  182
V  92.8% (232/250)  IGHV4-39*01  140  .............G.....................A..........CC......................................T...  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                       R  T  S  S  P  *  R  *  V  L  *  P  P  Q  T  R  L  Y  I  T  V  R  D  M  S  L  D  L  V  V 
                    Query_497    183  AGAACCAGTTCTCCCTGAAGGTGAGTTCTGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACATGAGTCTGGACCTGGTGGTA  272
V  92.8% (232/250)  IGHV4-39*01  230  ....................C....C..........................G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD2-15*01  13   ----------------------------------------------------------------------------------........  20

                                      ---------->                                  
                                       T  S  T  T  G  A  R  E  P  R  S  P  S  P  Q 
                    Query_497    273  ACATCGACTACTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  317
J  97.5% (39/40)    IGHJ4*02     9    -----......................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_111942

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           339     2e-95
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTAGA	TCAGGA	TGTACTAATACCAGCTGCT	CTCCGGAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTAGATCAGGATGTACTAATACCAGCTGCTCTCCGGATCTACTACTACGGTTTGGACGTC	AVDQDVLIPAALRIYYYGLDV	241	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	30	23	4	3	76.7
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	112	2	0	98.2
CDR3-IMGT (germline)	241	248	8	6	2	0	75
Total	N/A	N/A	251	236	12	3	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G     Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_498    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGCTACTCCATCAGCAGTGGT---TACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGA  87
V  94.0% (236/251)  IGHV4-61*01  49   ..................A..........TGG....G...........AGT.........A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  S  G  I  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_498    88   CTGGAGTGGATTGGGTATATCTATAACAGTGGGATCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  177
V  94.0% (236/251)  IGHV4-61*01  139  ........................T.........G.......................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       T  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  V  D  Q  D  V  L  I  P 
                    Query_498    178  ACGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGGTAGATCAGGATGTACTAATACCA  267
V  94.0% (236/251)  IGHV4-61*01  229  .A.......................G........................................AG...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.5% (17/19)    IGHD2-2*01   8    -----------------------------------------------------------------------------....G..G.....  20

                                      CDR3-IMGT-------------------------->                                 
                                       A  A  L  R  I  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_498    268  GCTGCTCTCCGGATCTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  336
D  89.5% (17/19)    IGHD2-2*01   21   ......---------------------------------------------------------------  26
J  98.2% (54/55)    IGHJ6*02     8    --------------.............A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_111941

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           375     3e-106
IGHD4-4*01                                                                                            14.1    9.2   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACGC	TGACGACAGT	GTTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACGCTGACGACAGTGTTAACTTTGATTAC	ARYADDSVNFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	264	24	0	91.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  N  F  M  S  Y 
                    Query_499    2    CAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACTTCTGGTTACAACTTTATGAGCTAT  91
V  91.7% (264/288)  IGHV1-18*01  7    ...................C...........................................G............C.....CC......  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  G  G  L  E  W  M  G  W  S  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_499    92   GGCATCAGTTGGGTGCGACAGGCCCCTGGAGGAGGACTTGAGTGGATGGGCTGGAGCAGCGCTTACAATGGTAACACAAACTATGCGCAG  181
V  91.7% (264/288)  IGHV1-18*01  97   ..T.....C.....................CA...G..............A....T..............................A...  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       D  F  R  G  R  V  T  M  T  T  D  R  S  T  S  T  A  Y  L  V  L  R  S  L  G  S  D  D  T  A 
                    Query_499    182  GACTTCCGGGGCAGAGTCACCATGACCACAGACAGATCCACGAGCACAGCCTACTTGGTGTTGAGGAGCCTGGGCTCTGACGACACGGCC  271
V  91.7% (264/288)  IGHV1-18*01  187  A.GC...A..........................C...................A...A.C...........A.A...............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  Y  A  D  D  S  V  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_499    272  GTGTATTATTGTGCGAGATACGCTGACGACAGTGTTAACTTTGATTACTGGGGACAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  91.7% (264/288)  IGHV1-18*01  277  ........C.........----------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                 
D  90.0% (9/10)     IGHD4-4*01   1    -----------------------....T.....-------------------------------------------------  10
J  95.6% (43/45)    IGHJ4*02     4    -------------------------------------.......C........C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_111940

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           377     1e-106
IGHD3-16*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACAAGCGGGCGGCACC	TTTGGGG	CGAGCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCAACTAC	ARGQAGGTFGASNY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	265	24	0	91.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  S  F  N  D  Y 
                    Query_500    2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAATGAAGGTCTCCTGCAAGGCTTCCGGTTACAGCTTTAACGACTAT  91
V  91.7% (265/289)  IGHV1-18*01  7    .............................................G......................T.......C.....C.AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  M  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  A  Y  N  G  N  T  K  Y  S  E 
                    Query_500    92   GGTATCACTTGGATGCGACAGGCCCCTGGACAGGGGCCTGAGTGGATGGGATGGATCAGCGCATATAATGGTAACACAAAGTATTCAGAG  181
V  91.7% (265/289)  IGHV1-18*01  97   .......GC...G...................A....T........................T..C..............C...G..C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  L  Q  G  R  L  I  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_500    182  AGGCTCCAGGGCAGACTCATCATGACCACAGACACATCCACGAGCACAGCCTACATGGAATTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  91.7% (265/289)  IGHV1-18*01  187  .A.............G...C.......................................GC.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  G  Q  A  G  G  T  F  G  A  S  N  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_500    272  GTCTATTATTGCGCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  91.7% (265/289)  IGHV1-18*01  277  ..G.....C..T.......---------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD3-16*01  15   ------------------------------------.......---------------------------------------------  21
J  100.0% (39/39)   IGHJ4*02     10   -------------------------------------------------.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_155554

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           352     3e-99
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCATAGGGGTG	ATTACGATTTTTGGAGGGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCATAGGGGTGATTACGATTTTTGGAGGGGTTATTGACTACTTCGACTAC	ARSIGVITIFGGVIDYFDY	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	234	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_501    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (234/243)  IGHV4-59*08  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  S  T  K  Y  N  P  S  L  Q  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_501    91   TGGATTGGTTATGTGTATTACAGTGGGAGCACCAAGTATAACCCCTCGCTCCAGAGTCGAGTCACCATATCACTAGACACCTCCAAGAAC  180
V  96.3% (234/243)  IGHV4-59*08  139  ........G...A.C....................C..C........C...A....................G.......G.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  I  G  V  I  T  I  F  G 
                    Query_501    181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGATCCATAGGGGTGATTACGATTTTTGGA  270
V  96.3% (234/243)  IGHV4-59*08  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.8% (23/24)    IGHD3-3*01   3    ---------------------------------------------------------------------------...............  17

                                      ----------------------->                                  
                                       G  V  I  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_501    271  GGGGTTATTGACTACTTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.8% (23/24)    IGHD3-3*01   18   .T.......-------------------------------------------------  26
J  97.9% (47/48)    IGHJ4*02     1    ----------.......T........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_111949

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           341     5e-96
IGHD3-16*01                                                                                           18.0    0.59 
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	CA	GATTACGTT	GACTATTTGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACCAGATTACGTTGACTATTTGGGCTACTATTACGGCATGGACGTC	VRPDYVDYLGYYYGMDV	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  P  I  R  T  T  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_502    1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCCCCATCAGAACTACTAGTTATTATTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.6% (234/250)  IGHV4-39*01  49   ...................C.............T.......C.G..G......C..C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  T  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S 
                    Query_502    91   CTGGAGTGGATTGGGAGTATCTATTACACTGGGAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGCAGACACGTCC  180
V  93.6% (234/250)  IGHV4-39*01  139  ..........................T.G.....G............................................T..........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  F  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  P  D  Y  V  D  Y  L 
                    Query_502    181  AAGAACCAGTTCTTCCTGAAGTTGAACTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGTGAGACCAGATTACGTTGACTATTTG  270
V  93.6% (234/250)  IGHV4-39*01  229  .............C.......C...G.................................C....C.....--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  8    ------------------------------------------------------------------------.........---------  16

                                      MGT-------------------->                                 
                                       G  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_502    271  GGCTACTATTACGGCATGGACGTCTGGGGCCAAGGGACCACCGTCACCGTCTCCTCA  327
J  94.5% (52/55)    IGHJ6*02     8    --......C.....T..........................G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_111948

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           12.2    33   
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GCCGCGAAAATCGGTCTTTGGACTACTTATCCC	TGGGGG	GGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCCGCGAAAATCGGTCTTTGGACTACTTATCCCTGGGGGGGGCGACTGGTTCGACCCC	ARGPRKSVFGLLIPGGGDWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  D  Y  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_503    1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCGATTACTATTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (233/245)  IGHV4-34*01  49   .......................................AG.GGT..C..........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  G  A  T  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_503    91   TGGATTGGGGAAATCAATCATGGTGCAACGACCAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  .....................A...G..GC............C...............................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  K  S  V  F  G  L 
                    Query_503    181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGCCGCGAAAATCGGTCTTTGGACTA  270
V  95.1% (233/245)  IGHV4-34*01  229  ....................C............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      -IMGT--------------------------->                                  
                                       L  I  P  G  G  G  D  W  F  D  P  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_503    271  CTTATCCCTGGGGGGGGCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  337
D  100.0% (6/6)     IGHD3-16*01  17   --------......-----------------------------------------------------  22
J  97.9% (47/48)    IGHJ5*02     4    -------------------................................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_348891

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           263     2e-72
IGHD2-8*02                                                                                            16.1    2.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGATGCGGCGGAGTGAATTCGGC	ACTGGTGG	GG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATGCGGCGGAGTGAATTCGGCACTGGTGGGGACTTCTTTGACCAC	ARMRRSEFGTGGDFFDH	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	20	10	0	66.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	94	20	0	82.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	207	39	0	84.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  R  S  V  S  F  L  W  S  W  V  R  Q  D  P  G  K  G 
                    Query_504    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTGAGGAGTGTGTCTTTCCTCTGGAGCTGGGTCCGCCAGGACCCAGGGAAGGGC  90
V  84.1% (207/246)  IGHV4-31*03  49   ....................................A.C..C....GTGG..A.TA..........A........C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  R  Y  Y  S  G  S  S  R  Y  N  P  S  L  G  S  R  V  S  M  S  L  D  T  S 
                    Query_504    91   CTGGAGTGGATTGGTTACAGGTATTACAGTGGAAGTAGTCGGTATAATCCGTCCCTCGGGAGTCGAGTTTCCATGTCACTAGACACGTCT  180
V  84.1% (207/246)  IGHV4-31*03  139  ..............G....TC...........G..C.CCTAC..C..C.........AA..........A....A...G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       R  N  Q  F  S  L  K  L  T  S  V  T  T  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  F  G 
                    Query_504    181  AGGAACCAATTTTCCCTGAAGTTGACCTCAGTGACGACCGCGGACACGGCCATCTATTACTGTGCGCGGATGCGGCGGAGTGAATTCGGC  270
V  84.1% (207/246)  IGHV4-31*03  229  .A......G..C.........C...G...T.....TG..............G.G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      MGT-------------------->                                  
                                       T  G  G  D  F  F  D  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_504    271  ACTGGTGGGGACTTCTTTGACCACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  328
D  100.0% (8/8)     IGHD2-8*02   11   ........--------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*02     1    ----------...A.......T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_155556

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           369     2e-104
IGHD6-19*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCA	AGTGGCTGG	CAAAGAGACTTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAAGTGGCTGGCAAAGAGACTTTCTTTGACTAC	ARDQVAGKETFFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_505    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (243/250)  IGHV3-21*01  47   ........................................................A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  S  D  S  A  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_505    91   AGTGGGTCTCAGCCATTAGTAGTGATAGTGCTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (243/250)  IGHV3-21*01  137  ...........T...........AG....AG...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  D  Q  V  A  G  K  E  
                    Query_505    181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGCGAGAGATCAAGTGGCTGGCAAAGAGA  270
V  97.2% (243/250)  IGHV3-21*01  227  .........................................................A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-19*01  10   -------------------------------------------------------------------------.........--------  18

                                      ------------->                                  
                                      T  F  F  D  Y  W  G  Q  G  A  L  V  T  I  S  S  
                    Query_505    271  CTTTCTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCATCTCCTCAG  318
J  95.5% (42/44)    IGHJ4*02     5    ----......................A...........G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_231866

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           252     3e-69
IGHD2-15*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TA	AGGAGATTGTGGTGGTGG	CGACTGCTGGCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGATAAGGAGATTGTGGTGGTGGCGACTGCTGGCCACTACGGTTTTGACGTC	TRDKEIVVVATAGHYGFDV	246	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	131	27	14	10	3	51.9
FR3-IMGT	132	245	114	96	18	0	84.2
CDR3-IMGT (germline)	246	253	8	6	2	0	75
Total	N/A	N/A	253	209	41	3	82.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  D  D  Y  E  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_506    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCGATGATTATGAAATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  82.6% (209/253)  IGHV3-48*03  47   ....................................C....AG.AG...........A.....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><--------CDR2-IMGT--------><------------------------------------------------
                                      E  W  V  A  S  I  S  V  T  R  L  G  H  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  
                    Query_506    91   AGTGGGTGGCCTCCATCAGTGTCACTAGACTTGGCCACACATTCTATGCTGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACG  180
V  82.6% (209/253)  IGHV3-48*03  137  .......TT.A.A...T...---.G...TGG.A.TAC..T..A...C..A.....T...........A......................  223
                                      E  W  V  S  Y  I  S     S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  

                                      ----FR3-IMGT----------------------------------------------------><-----------------------C
                                      D  N  Q  S  V  S  L  Q  M  N  H  L  R  G  D  D  T  A  V  Y  Y  C  T  R  D  K  E  I  V  V  
                    Query_506    181  ACAACCAGTCAGTTTCTCTGCAAATGAACCACCTGAGAGGCGACGATACGGCTGTTTATTATTGTACAAGAGATAAGGAGATTGTGGTGG  270
V  82.6% (209/253)  IGHV3-48*03  224  C...GA.C...C.G.A.............AG........C...G..C..............C...G.G.....-----------------  296
                                      A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                    
D  88.9% (16/18)    IGHD2-15*01  1    ---------------------------------------------------------------------------....T.....A....  15

                                      DR3-IMGT----------------------->                               
                                      V  A  T  A  G  H  Y  G  F  D  V  W  G  H  G  T  T  V  I  V  S  
                    Query_506    271  TGGCGACTGCTGGCCACTACGGTTTTGACGTCTGGGGCCACGGGACCACGGTCATCGTCTCCT  333
D  88.9% (16/18)    IGHD2-15*01  16   ...------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     13   ---------------........A.G..............A.............C........  60


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_155557

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-13*01                                                                                           369     2e-104
IGHJ2*01                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-13*01	N/A	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	CCCCTTTAGGTG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCCCCTTTAGGTGACTGGTACTTCGATCTC	ARAPLGDWYFDL	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	241	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  D  M  H  W  V  R  Q  A  T  G  K  G  L  
                    Query_507    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTCCTACGACATGCACTGGGTCCGCCAAGCTACAGGAAAAGGTCTGG  90
V  98.0% (241/246)  IGHV3-13*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  D  M  H  W  V  R  Q  A  T  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  A  T  A  G  D  T  Y  Y  P  G  S  V  K  G  R  F  T  I  S  R  E  S  A  K  
                    Query_507    91   AGTGGGTCTCAGCTATTGCTACTGCTGGTGACACATACTATCCAGGCTCCGTGAAGGGCCGATTCACCATCTCCAGAGAAAGTGCCAAGA  180
V  98.0% (241/246)  IGHV3-13*01  137  ..................G..............................................................A........  226
                                      E  W  V  S  A  I  G  T  A  G  D  T  Y  Y  P  G  S  V  K  G  R  F  T  I  S  R  E  N  A  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  S  L  Y  L  Q  I  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R  A  P  L  G  D  W  Y  F  
                    Query_507    181  ACTCCTTGTATCTTCAAATAAACAGCCTGAGAGCCGGGGACACGGCTGTGTATTACTGTGCAAGAGCCCCTTTAGGTGACTGGTACTTCG  270
V  98.0% (241/246)  IGHV3-13*01  227  ...................G..............................................------------------------  292
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R                          
J  98.0% (50/51)    IGHJ2*01     3    ------------------------------------------------------------------------------............  14

                                      ---->                                  
                                      D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_507    271  ATCTCTGGGGCCGTGGCACCCTGGTCACAGTCTCCTCAG  309
J  98.0% (50/51)    IGHJ2*01     15   ............................T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_241462

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           282     4e-78
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	217	27	6	86.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_508    4    CCCTGAGACTCTCCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.8% (217/250)  IGHV4-34*01  50   .....TCC...A..........C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_508    94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.8% (217/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_508    184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.8% (217/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_508    274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_188025

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           338     4e-95
IGHD3-10*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	229	13	0	94.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_509    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  94.6% (229/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  F  Y  I  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_509    91   TGGATTGGGCATATCTTCTACATTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  94.6% (229/242)  IGHV4-59*01  139  .........T......AT....G...G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_509    181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  94.6% (229/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_509    271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_163133

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           349     2e-98
IGHD5-12*01                                                                                           18.0    0.61 
IGHJ2*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGAAATGTATGAT	TATAGTGGC	ACAATATAT	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGAAATGTATGATTATAGTGGCACAATATATTGGTACTTCGATCTC	ARQEMYDYSGTIYWYFDL	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  S  R  S  Y  P  W  G  W  V  R  Q  P  P  R  K  G 
                    Query_510    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGCAGTAGGAGCTACCCCTGGGGCTGGGTCCGCCAGCCCCCACGGAAGGGG  90
V  94.4% (237/251)  IGHV4-39*01  49   ......................................C........T..T...TA..........A..............G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  N  S  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  H  T  S 
                    Query_510    91   CTGGAGTGGATTGGGACTATCTATAATAGTGGGAGGACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTACACACGTCG  180
V  94.4% (237/251)  IGHV4-39*01  139  ................G.......T..........C.............................................G.......C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       N  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  E  M  Y  D  Y  S 
                    Query_510    181  AACAACCAGTTCTCCCTGCAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACAAGAAATGTATGATTATAGT  270
V  94.4% (237/251)  IGHV4-39*01  229  ..G...............A....................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD5-12*01  6    ------------------------------------------------------------------------------------......  11

                                      -IMGT--------------------->                                  
                                       G  T  I  Y  W  Y  F  D  L  W  G  R  G  S  L  V  T  V  S  S  
                    Query_510    271  GGCACAATATATTGGTACTTCGATCTCTGGGGCCGTGGCTCCCTGGTCACTGTCTCCTCAG  331
D  100.0% (9/9)     IGHD5-12*01  12   ...----------------------------------------------------------  14
J  98.0% (48/49)    IGHJ2*01     5    ------------...........................A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_163132

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            353     9e-100
IGHD2-8*02                                                                                            19.9    0.15  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AAAGCGGGCTC	TACTGGTGGT	AACC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAAAGCGGGCTCTACTGGTGGTAACCTTGACTAC	ARKAGSTGGNLDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  I  F  T  H  Y  W  M  S  W  V  R  Q  A  P  G  K  W  L  
                    Query_511   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTTACTCACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGTGGCTGG  90
V  95.6% (237/248)  IGHV3-7*03  47   ....................................CC....G.AG.....................................G......  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  D  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_511   91   AGTGGGTTGCCGACATAAAGCAGGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (237/248)  IGHV3-7*03  137  .......G...A..........A...................................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                     K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  K  A  G  S  T  G  G  
                    Query_511   181  AGAACTCAGTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAAAAGCGGGCTCTACTGGTGGTA  270
V  95.6% (237/248)  IGHV3-7*03  227  ........C.G.........................................................----------------------  294
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD2-8*02  10   -------------------------------------------------------------------------------..........-  19

                                     ---------->                                  
                                     N  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_511   271  ACCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (42/42)   IGHJ4*02    7    ---..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_163131

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           367     6e-104
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_512    1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_512    91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.2% (242/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_512    181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  97.2% (242/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_512    271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_348892

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           283     1e-78
IGHD3-3*01                                                                                            16.1    2.1  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCGATG	ACGATTTT	N/A	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCGATGACGATTTTTGGTTTGACCAC	ARSDDDFWFDH	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	212	31	0	87.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  P  I  T  H  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_513    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCCCCATCACTCATTATTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  87.2% (212/243)  IGHV4-59*08  49   ...............................G.T......G.AG...C.....................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  A  Y  I  D  D  R  G  T  T  S  Y  I  P  S  L  K  S  R  V  T  I  S  I  D  T  S  R  Y 
                    Query_513    91   TGGGTAGCATATATTGACGACAGAGGGACCACCAGCTACATTCCCTCCCTCAAGAGTCGAGTCACCATATCGATCGACACGTCCAGGTAC  180
V  87.2% (212/243)  IGHV4-59*08  139  ...A.T.GG.....CT.TT....T....G.....A.....AC.............................AG.A..........A.A..  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  I  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  S  D  D  D  F  W  F  D  H 
                    Query_513    181  CAGATCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCATTTATTTTTGTGCGAGAAGCGATGACGATTTTTGGTTTGACCAC  270
V  87.2% (212/243)  IGHV4-59*08  229  ...T...........C.............................G.G....AC.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-3*01   6    ----------------------------------------------------------------------........------------  13
J  93.5% (43/46)    IGHJ5*02     6    ------------------------------------------------------------------------------.....C....C.  17

                                                                        
                                       W  G  Q  G  T  P  V  T  V  S  S  
                    Query_513    271  TGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  304
J  93.5% (43/46)    IGHJ5*02     18   ................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_163136

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q 
                    Query_514    1    ACCCTGTCCCTCACCTGCACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAA  90
V  91.0% (223/245)  IGHV4-59*01  49   ....................T..........................C........C............C.................G.G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_514    91   TGGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAAC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A....G.....C...T....T....G......C..............C...........C.C.........A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E 
                    Query_514    181  CAGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAG  270
V  91.0% (223/245)  IGHV4-59*01  229  ...T.........AG..G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  1    -----------------------------------------------------------------------------............-  12

                                      -------------->                                  
                                       D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_514    271  GATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  319
J  92.5% (37/40)    IGHJ4*02     9    ---------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_345199

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD2-8*02                                                                                            12.2    31   
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGA	GTACTG	CCACCGAGTCTAGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGAGTACTGCCACCGAGTCTAGGTGGTTCGACCCC	ARDQSTATESRWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_515    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   .......................................................G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  H  S  G  T  T  Q  Y  N  P  S  L  K  S  R  V  T  I  S  M  D  T  S  K  K 
                    Query_515    91   TGGATTGGTTACATCCATCACAGTGGGACCACCCAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATGGACACGTCCAAGAAG  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G..T...T..T.........G....A.C....................................G.A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  S  T  A  T  E  S  R 
                    Query_515    181  CAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTTTATTATTGTGCGAGAGATCAGAGTACTGCCACCGAGTCTAGG  270
V  93.5% (229/245)  IGHV4-59*01  229  .............A......C...........T..............G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-8*02   9    ----------------------------------------------------------------------......--------------  14

                                      ----------->                                  
                                       W  F  D  P  W  G  H  G  T  L  V  T  V  S  S  
                    Query_515    271  TGGTTCGACCCCTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.8% (45/46)    IGHJ5*02     6    ....................G.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_345198

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           361     4e-102
IGHD3-3*01                                                                                            14.1    8.3   
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	238	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_516    1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  97.1% (238/245)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  N  R  V  T  I  S  A  D  T  S  K  N 
                    Query_516    91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTAAAGAATAGAGTCACCATATCAGCAGACACCTCCAAGAAC  180
V  97.1% (238/245)  IGHV4-34*01  139  ..................................................C....G.C...............T......G.........  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_516    181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  97.1% (238/245)  IGHV4-34*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  G  G  Q  G  T  L  V  T  V  S  S  
                    Query_516    271  GCCCCTTTTGACTACGGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  97.7% (42/43)    IGHJ4*02     6    ------.........T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_345197

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*07                                                                                           355     3e-100
IGHD3-10*01                                                                                           14.1    8.2   
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*07	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCC	TTCGGGG	GGTGACAGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTCGGGGGGTGACAGGTTTGACTAC	ARDPSGGDRFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	239	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_517    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.2% (239/251)  IGHV4-39*07  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_517    91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCAACTACAATCCCTCCCTCAAGAGTCGAGTTTCCATATCAGTAGACACGTCC  180
V  95.2% (239/251)  IGHV4-39*07  139  .......................................T.......C..G.................CA....................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  D  P  S  G  G  D  R 
                    Query_517    181  AAGAACCAGTTCTCCCTGAAACTGAACTCCGTGACGGCTGCGGACACGGCCGTTTATTTCTGTGCGAGAGATCCTTCGGGGGGTGACAGG  270
V  95.2% (239/251)  IGHV4-39*07  229  ....................G....G...T.....C..C..............G....A............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-10*01  13   --------------------------------------------------------------------------.......---------  19

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_517    271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  313
J  97.7% (42/43)    IGHJ4*02     6    ......................................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_345196

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           442     2e-126
IGHD3-22*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              108     9e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCCGT	TGGTTAT	AATTCCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTC	ARAVGYNSDYYYGMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	286	3	0	99


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_518    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  99.0% (286/289)  IGHV5-51*01  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_518    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGACC  180
V  99.0% (286/289)  IGHV5-51*01  96   .......................................................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  A  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  A
                    Query_518    181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGGCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACCCCGC  270
V  99.0% (286/289)  IGHV5-51*01  186  .....................................T...............................................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        M  Y  Y  C  A  R  A  V  G  Y  N  S  D  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_518    271  CATGTATTACTGTGCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  99.0% (286/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-22*01  19   ------------------------.......-----------------------------------------------------------  25
J  100.0% (56/56)   IGHJ6*02     7    --------------------------------------....................................................  58

                                          
                                        S 
                    Query_518    361  CTCA  364
J  100.0% (56/56)   IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_345195

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           305     3e-85
IGHD2-8*01                                                                                            12.2    31   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GTATCC	CTAATG	CCACCTTCA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGTATCCCTAATGCCACCTTCAACTTTGACTAC	AKGIPNATFNFDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	22	24	3	3	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	46	5	0	90.2
CDR2-IMGT	100	123	24	17	7	0	70.8
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	223	209	14	0	93.7


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  T  T  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  D  W  V  S  V  I  G  V  S 
                    Query_519    22   TCTGGATTCACCTTTACCACCTATGCCATGACCTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGACTGGGTCTCAGTAATTGGTGTTAGT  111
V  93.7% (209/223)  IGHV3-23*01  73   ................G..G...........G............G....................G..........CT...A...G....  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       D  T  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 
                    Query_519    112  GATACTAAGACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAAC  201
V  93.7% (209/223)  IGHV3-23*01  163  .G.GG..GC.................................................................................  252
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><--------------CDR3-IMGT-------------->               
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  I  P  N  A  T  F  N  F  D  Y  W  G  Q  G  T 
                    Query_519    202  AGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGGTATCCCTAATGCCACCTTCAACTTTGACTACTGGGGCCAGGGAACC  291
V  93.7% (209/223)  IGHV3-23*01  253  ...........................................-----------------------------------------------  295
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  100.0% (6/6)     IGHD2-8*01   12   -------------------------------------------------......-----------------------------------  17
J  100.0% (45/45)   IGHJ4*02     4    ----------------------------------------------------------------..........................  29

                                                         
                                       L  V  T  V  S  S  
                    Query_519    292  CTGGTCACCGTCTCCTCAG  310
J  100.0% (45/45)   IGHJ4*02     30   ...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_345194

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           307     1e-85
IGHD5-12*01                                                                                           12.2    30   
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCC	GTGGAT	TAAGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCGTGGATTAAGCTTC	ATRGLSF	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	221	25	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  D  M  N  W  L  R  Q  A  P  G  K  G  P  
                    Query_520    1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACTTTCAGTAATTACGACATGAACTGGCTCCGCCAGGCTCCTGGGAAGGGGCCGG  90
V  89.8% (221/246)  IGHV3-48*03  47   .....................C...............C.......G...T..A.........G.............A..........T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  D  I  T  Y  N  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_520    91   AGTGGGTCTCATCCATTAGTAGTCGTGGAGATATCACATACAACGCGGACTCAGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  89.8% (221/246)  IGHV3-48*03  137  .......T....A..........A....TAG..C..T....T....A.....T...A.................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  S  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  T  R  G  L  S  F  W  G  
                    Query_520    181  AGAACTCACTGTCCCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTCTTTATTACTGTGCGACCCGTGGATTAAGCTTCTGGGGCC  270
V  89.8% (221/246)  IGHV3-48*03  227  ............AT......................C...G.........G...............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD5-12*01  1    ---------------------------------------------------------------------......---------------  6
J  94.3% (33/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  A  Q  V  T  V  S  S  
                    Query_520    271  AGGGAGCCCAGGTCACCGTCTCCTCAG  297
J  94.3% (33/35)    IGHJ4*02     22   .....A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_345193

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_521    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGTTCTGGATACAGTTTTTCCACTTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ....................................C.............A...........................C...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  P
                    Query_521    91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGACCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   C.......G.................................................T.T...............A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_521    181  GTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .......C.....................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_521    271  CATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD1-26*01  4    -----------------------------...G....A.....-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------......TA....................................  49

                                                   
                                        T  V  S  S 
                    Query_521    361  CACCGTCTCGTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_345191

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           327     9e-92
IGHD1-1*01                                                                                            12.2    34   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCAGGAT	GTACAA	GTGCCAGGTGATCTGCGGATA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAGATCAGGATGTACAAGTGCCAGGTGATCTGCGGATATACTTCTACGGTTTGGACGTC	AADQDVQVPGDLRIYFYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	230	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  A  T  D  L  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_522    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCGCCACTGATCTTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.6% (230/251)  IGHV4-61*01  49   .......................................AG..G..G.AG........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  L  Y  Y  N  G  V  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  R  D  S  S 
                    Query_522    91   CTGGAGTGGATTGGATATCTCTATTACAATGGGGTCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAAGAGACTCGTCC  180
V  91.6% (230/251)  IGHV4-61*01  139  ..............G...A.........G....AG...........................................GT....A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  M  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  A  D  Q  D  V  Q  V  P 
                    Query_522    181  AAGAACCAGTTCTCCCTGAAGATGAACTCTGTGACCGCTGCGGACTCGGCCGTATATTATTGTGCGGCAGATCAGGATGTACAAGTGCCA  270
V  91.6% (230/251)  IGHV4-61*01  229  .....................C...G...................A.......G.....C......AG...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-1*01   2    ------------------------------------------------------------------------------......------  7

                                      CDR3-IMGT-------------------------->                                 
                                       G  D  L  R  I  Y  F  Y  G  L  D  V  W  G  L  G  T  T  V  T  V  S  S 
                    Query_522    271  GGTGATCTGCGGATATACTTCTACGGTTTGGACGTCTGGGGCCTAGGGACCACGGTCACCGTCTCCTCA  339
J  94.4% (51/54)    IGHJ6*02     9    ---------------....A.......A...............A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_348894

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            325     3e-91
IGHD3-3*01                                                                                            35.3    4e-06
IGHJ5*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGTCGTCGCCGAA	ACGATTTTTGGAGTGGTT	TTGAGAT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGTCGTCGCCGAAACGATTTTTGGAGTGGTTTTGAGATCTGGTTCGATTCA	ARLRRRRNDFWSGFEIWFDS	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  I  A  S  E  F  T  F  S  S  H  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_523   1    GGTCCCTGAGACTCTCCTGTATAGCCTCTGAATTCACCTTTAGTAGTCATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (228/248)  IGHV3-7*01  47   ....................GC........G...............CT..........C...............................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  N  H  D  G  S  E  T  K  Y  V  A  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_523   91   AGTGGGTGGCCAACATAAACCACGATGGAAGTGAGACAAAGTATGTGGCCTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.9% (228/248)  IGHV3-7*01  137  ...................G..A.............A.T.C.......A.........................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------------CD
                                     R  D  S  V  F  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  A  R  L  R  R  R  R  N  D  
                    Query_523   181  GGGATTCAGTGTTTCTACAAATGAACAGCCTGAGAGTCGACGACACGGCTGTGTATTACTGTGCGAGACTTCGTCGTCGCCGAAACGATT  270
V  91.9% (228/248)  IGHV3-7*01  227  A.A.C...C...A...G...................C...G...........................----------------------  294
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-3*01  6    ------------------------------------------------------------------------------------......  11

                                     R3-IMGT------------------------>                                  
                                     F  W  S  G  F  E  I  W  F  D  S  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_523   271  TTTGGAGTGGTTTTGAGATCTGGTTCGATTCATGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  336
D  100.0% (18/18)   IGHD3-3*01  12   ............------------------------------------------------------  23
J  91.5% (43/47)    IGHJ5*01    5    -------------------.........C..C........A.........G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_178432

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           327     9e-92
IGHD6-6*01                                                                                            27.6    7e-04
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	TC	ATAGCAGCTCGTCC	TTCTA	TGAGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACTCATAGCAGCTCGTCCTTCTATGAGTAC	TTHSSSSFYEY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	231	22	0	91.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  T  W  L  S  W  V  R  Q  D  P  E  K  G  L  
                    Query_524    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACACCTGGCTGAGCTGGGTCCGCCAGGATCCAGAGAAGGGTCTGG  90
V  91.3% (231/253)  IGHV3-15*01  47   .......T.......................................G.....A..................C.....G......G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      A  W  G  G  R  I  K  S  E  T  H  G  G  T  T  D  Y  P  A  P  V  K  G  R  F  T  V  S  R  D  
                    Query_524    91   CGTGGGGTGGCCGTATTAAAAGCGAGACTCATGGTGGGACAACAGACTACCCTGCACCCGTGAAAGGCAGATTCACCGTCTCTAGAGATG  180
V  91.3% (231/253)  IGHV3-15*01  137  A.....T................A.A...G....................G..........................A....A.......  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  D  T  L  Y  L  H  M  N  D  L  K  S  E  D  T  A  V  Y  Y  C  T  T  H  S  S  S  S  
                    Query_524    181  ATTCAAAAGACACCCTATATCTGCACATGAACGACCTGAAAAGCGAGGACACAGCCGTGTATTACTGCACCACTCATAGCAGCTCGTCCT  270
V  91.3% (231/253)  IGHV3-15*01  227  ........A....G..G........A......AG........C........................T.....-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (14/14)   IGHD6-6*01   5    ---------------------------------------------------------------------------..............-  18

                                      ---------->                                  
                                      F  Y  E  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_524    271  TCTATGAGTACTGGGGTCAGGGAACCCGGGTCACCGTCTCCTCAG  315
J  92.7% (38/41)    IGHJ4*02     8    ----...C........C..........T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_178433

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           428     3e-122
IGHD7-27*01                                                                                           14.1    10.0  
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTCTCTACAGAACCGTCCTATGGGACA	CTAACTG	TGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCC	ARDPFSTEPSYGTLTVRFDP	290	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	75	0	0	100
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	296	285	11	0	96.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_525    2    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  91
V  96.3% (285/296)  IGHV1-18*01  1    ..........................................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  P  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  D  T  N  Y 
                    Query_525    92   AACTATCCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTGACACAAATTAT  181
V  96.3% (285/296)  IGHV1-18*01  91   .G....GG..........................................................G...........A.......C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  D  L  R  S  L  T  S  D  D 
                    Query_525    182  GCACAGAAGTTCCAGGGCAGAGTCACCTTGACCACAGACACGTCCACGAGCACAGCCTACATGGACCTGAGGAGCCTGACATCTGACGAC  271
V  96.3% (285/296)  IGHV1-18*01  181  .........C.................A.............A.......................G.............G..........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  V  Y  Y  C  A  R  D  P  F  S  T  E  P  S  Y  G  T  L  T  V  R  F  D  P  W  G  Q  G 
                    Query_525    272  ACGGCCGTGTATTACTGTGCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCCTGGGGCCAGGGA  361
V  96.3% (285/296)  IGHV1-18*01  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD7-27*01  1    ---------------------------------------------------------.......--------------------------  7
J  97.8% (44/45)    IGHJ5*02     7    -------------------------------------------------------------------.......................  29

                                                            
                                       T  L  V  T  V  S  T  
                    Query_525    362  ACCCTGGTCACCGTCTCCACAG  383
J  97.8% (44/45)    IGHJ5*02     30   ..................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_170585

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           422     2e-120
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTGA	TATGGTTCGCGGAGTT	CTTGAGAGGGAGGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTGATATGGTTCGCGGAGTTCTTGAGAGGGAGGCCTAC	ARLDMVRGVLEREAY	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	70	1	0	98.6
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	110	4	0	96.5
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  
                    Query_526    6    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGCAAGGGTTCTGGGTACAGCTTTTCCACCT  95
V  96.6% (280/290)  IGHV5-51*03  5    .............................................................T...........A.........A...G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  S  
                    Query_526    96   ACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACAGCC  185
V  96.6% (280/290)  IGHV5-51*03  95   .........G........................................................G.......................  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  R  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  P  
                    Query_526    186  CGTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACCCCG  275
V  96.6% (280/290)  IGHV5-51*03  185  .........A..........................................................A.................A...  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------CDR3-IMGT----------------->                               
                                      A  M  Y  Y  W  A  R  L  D  M  V  R  G  V  L  E  R  E  A  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_526    276  CCATGTATTACTGGGCGAGACTTGATATGGTTCGCGGAGTTCTTGAGAGGGAGGCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  365
V  96.6% (280/290)  IGHV5-51*03  275  .............T......----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  93.8% (15/16)    IGHD3-10*01  8    -------------------------.........G......-------------------------------------------------  23
J  100.0% (38/38)   IGHJ4*02     11   -------------------------------------------------------...................................  45

                                         
                                      S  
                    Query_526    366  CAG  368
J  100.0% (38/38)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_250169

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           307     1e-85
IGHD3-10*01                                                                                           12.2    33   
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCCGATCA	ACTTTGGTT	TCTTGGGACCACAGTCGGGATTG	TACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCCGATCAACTTTGGTTTCTTGGGACCACAGTCGGGATTGTACTCTGACTAC	ARSPINFGFLGPQSGLYSDY	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	219	23	0	90.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  K  
                    Query_527    4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGGTCCCTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGAAGT  93
V  90.5% (219/242)  IGHV4-34*01  50   .....TCC...A.......................T..............................................G...G...  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  L  R  G  G  T  N  Y  H  P  S  L  K  S  R  A  S  I  S  T  D  A  S  K  N  
                    Query_527    94   GGATTGGGGAAATCAATCTTCGTGGAGGCACCAACTACCACCCGTCCCTCAAGAGTCGGGCCTCCATATCAACGGACGCGTCGAAGAATC  183
V  90.5% (219/242)  IGHV4-34*01  140  ..................A.A.....A...........A...................A.T.A........GTA...A....C.....C.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  I  N  F  G  F  L  G  
                    Query_527    184  AGTTCTCCCTGAAGCTGACGTCTGTGACCGCCGCGGACACGGCTGTATATTACTGTGCGAGAAGCCCGATCAACTTTGGTTTCTTGGGAC  273
V  90.5% (219/242)  IGHV4-34*01  230  ..................GC..........................G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  88.9% (8/9)      IGHD3-10*01  6    ------------------------------------------------------------------------...A.....---------  14

                                      T------------------------>                                  
                                      P  Q  S  G  L  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_527    274  CACAGTCGGGATTGTACTCTGACTACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  333
J  95.7% (44/46)    IGHJ4*02     3    --------------....T..................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_178434

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           305     3e-85
IGHD6-13*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACTGG	GCAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACTGGGCAGCAGCTGACTGACTAC	ARDTGQQLTDY	276	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	275	147	110	4	33	74.8
CDR3-IMGT (germline)	276	283	8	8	0	0	100
Total	N/A	N/A	283	241	9	33	85.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_528    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  85.2% (241/283)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  D  S  P  R  Y  Y  A  D  S  V  K  G  R  F  T  Y  Y  A  D  S  V  
                    Query_528    91   AGTGGGTCTCATCCATTAGTAGTAGTGATAGTCCCAGATATTACGCAGACTCAGTGAAGGGCCGATTCACCTATTATGCAGACTCAGTGA  180
V  85.2% (241/283)  IGHV3-21*01  137  ..........................AG....TA..T...C...---------------------------------.............  193
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y                                   A  D  S  V  

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                      K  G  R  F  T  I  S  R  D  D  A  K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  
                    Query_528    181  AGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATT  270
V  85.2% (241/283)  IGHV3-21*01  194  ..........................A..........C...............................C....................  283
                                      K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-----------CDR3-IMGT----------->                                  
                                      Y  C  A  R  D  T  G  Q  Q  L  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_528    271  ACTGTGCGAGAGATACTGGGCAGCAGCTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
V  85.2% (241/283)  IGHV3-21*01  284  .............-----------------------------------------------------------  296
                                      Y  C  A  R                                                              
D  100.0% (10/10)   IGHD6-13*01  8    -------------------..........-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_178435

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           318     6e-89
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGGGATCCT	GCAGTGGC	GGCAATTGCTACGGGGAGGACAAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGGGATCCTGCAGTGGCGGCAATTGCTACGGGGAGGACAAT	ARDRGSCSGGNCYGEDN	237	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	11	1	0	91.7
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	106	8	0	93
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	233	218	15	0	93.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  I  F  S  T  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 
                    Query_529    12   TGTGCAGCCTCGGGATTCATCTTCAGTACCTATGCCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATA  101
V  93.6% (218/233)  IGHV3-30*03  64   ...........T.......C........G.....G...G...................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  Y  D  G  N  N  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  K  S  T  V  F  L 
                    Query_529    102  TCATATGATGGAAATAATATATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGAGCACGGTGTTTCTG  191
V  93.6% (218/233)  IGHV3-30*03  154  .............G.....A...............................................A........A....C...A....  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------------CDR3-IMGT---------------
                                       Q  M  N  S  L  R  A  D  D  T  A  K  Y  Y  C  A  R  D  R  G  S  C  S  G  G  N  C  Y  G  E 
                    Query_529    192  CAAATGAACAGCCTGAGAGCTGACGACACGGCTAAATATTACTGTGCGAGAGATCGGGGATCCTGCAGTGGCGGCAATTGCTACGGGGAG  281
V  93.6% (218/233)  IGHV3-30*03  244  .......................G.........GTG.................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (8/8)     IGHD6-19*01  8    ----------------------------------------------------------------........------------------  15

                                      ----->                                  
                                       D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_529    282  GACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (34/34)   IGHJ4*02     15   ------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_178439

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCGACC	GGGTACATCAGTGGC	GGCA	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCGACCGGGTACATCAGTGGCGGCATCGACCTC	AKATGYISGGIDL	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	24	16	5	3	66.7
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	247	222	22	3	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  D  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_530    1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCAGTTTTGACACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  89.9% (222/247)  IGHV3-23*01  47   .....................C..............CC...AG..G.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  S  S  G     G  D  N  T  Y  Y  A  D  S  V  K  G  R  F  A  L  S  R  D  N  S  
                    Query_530    91   AATGGGTCTCAGGTTCTAGTGGT---GGTGATAATACATACTACGCAGACTCCGTGAAGGGCCGGTTCGCCCTCTCCAGAGACAATTCCA  177
V  89.9% (222/247)  IGHV3-23*01  137  .G..........C.AT.......AGT....G..GC.................................A..A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  S  T  L  Y  L  H  M  N  G  L  R  V  E  D  T  A  I  Y  Y  C  A  K  A  T  G  Y  I  S  G  
                    Query_530    178  AGAGCACACTGTATCTGCACATGAACGGCCTGAGAGTCGAGGACACGGCCATATATTACTGTGCGAAGGCGACCGGGTACATCAGTGGCG  267
V  89.9% (222/247)  IGHV3-23*01  227  ...A...G...........A......A.........C.............G................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  86.7% (13/15)    IGHD6-19*01  1    --------------------------------------------------------------------------.....T.G.......-  15

                                      ---------->                                  
                                      G  I  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_530    268  GCATCGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.6% (41/42)    IGHJ5*02     10   ---......C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_215753

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           324     8e-91
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGACA	GTTCGAT	TATTATGA	GGGTTCTACTTACCCAAGA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACAGTTCGATTATTATGAGGGTTCTACTTACCCAAGATACTTTGACTCC	ARQFDYYEGSTYPRYFDS	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  G  F  F  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_531    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTGGTTTTTTCTGGAGTTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*08  49   ....................................A.....A...AC.A......C......................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  L  V  D  T  S  K  T 
                    Query_531    91   TGGATTGGGTATATCTTTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGGGTCACCATGTTAGTAGACACGTCCAAGACT  180
V  92.2% (226/245)  IGHV4-59*08  139  ................A..........................................A........A.C.................AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  R  S  M  T  A  S  D  T  A  V  Y  Y  C  A  R  Q  F  D  Y  Y  E  G  S  T 
                    Query_531    181  CAGTTCTCCCTGAGGCTGAGGTCTATGACCGCCTCAGACACGGCCGTATATTACTGTGCGCGACAGTTCGATTATTATGAGGGTTCTACT  270
V  92.2% (226/245)  IGHV4-59*08  229  .............A......C...G........G.............G............A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-16*01  2    ------------------------------------------------------------------------........----------  9

                                      -------------------->                                  
                                       Y  P  R  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_531    271  TACCCAAGATACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.8% (45/46)    IGHJ4*02     3    ---------..........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_215752

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD5-18*01                                                                                           18.0    0.60 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_532    4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  91.0% (222/244)  IGHV4-59*01  50   .....TCC...A..................G........G.AG..A......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S  
                    Query_532    94   GGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGCC  183
V  91.0% (222/244)  IGHV4-59*01  140  .......G......T..........G.GC.............................A.T......A...................A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F  
                    Query_532    184  AGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTTG  273
V  91.0% (222/244)  IGHV4-59*01  230  ............A.........................A.......G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------------------------.......C.G..A..  15

                                      ------------------->                                  
                                      G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_532    274  GTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  327
D  83.3% (15/18)    IGHD5-18*01  16   ...---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    -----...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_215751

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAGTTAT	CAGGGT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGGCTCCACCCC	ARSGSGSYQGWLHP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	221	21	0	91.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  P  Y  Y  W  I  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_533    1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGTCCTTACTACTGGATCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.3% (221/242)  IGHV4-59*01  49   ..................A............G..........AG...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  H  I  L  Y  T  G  S  T  K  Y  K  P  S  L  K  G  R  V  T  I  S  L  D  T  S  R  K 
                    Query_533    91   TGGCTTGGCCATATCCTTTACACTGGGAGCACCAAATACAAGCCCTCCCTCAAGGGTCGAGTCACCATTTCACTAGACACGTCCAGGAAG  180
V  91.3% (221/242)  IGHV4-59*01  139  ...A....GT.....TA.....G............C.....C............A.............A...G............A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  S  Y  Q  G  W 
                    Query_533    181  CAGTTCTCCCTGAAACTGCGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGG  270
V  91.3% (221/242)  IGHV4-59*01  229  ..............G...A.C.........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (15/15)   IGHD3-10*01  11   ------------------------------------------------------------------...............---------  25
J  87.0% (40/46)    IGHJ5*02     6    ---------------------------------------------------------------------------------------...  8

                                      -------->                                  
                                       L  H  P  W  G  L  G  R  L  V  I  V  S  S  
                    Query_533    271  CTCCACCCCTGGGGCCTGGGAAGACTGGTCATCGTCTCCTCAG  313
J  87.0% (40/46)    IGHJ5*02     9    T..G............A.....CC.......C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_215757

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            363     1e-102
IGHD2-15*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TACTGG	ATTGTAGTGGTGCTATCTGCTACT	TCCTGGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGATATACTGGATTGTAGTGGTGCTATCTGCTACTTCCTGGCTTTTGACTCC	TRDILDCSGAICYFLAFDS	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	252	10	8	2	0	80
Total	N/A	N/A	252	242	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  Q  G  L  
                    Query_534    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGCAGGGCCTGG  90
V  96.0% (242/252)  IGHV3-9*01   47   .....................................C..........................................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  D  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_534    91   AGTGGGTCTCAGGCATTAGTTGGAATAGTGACAGTATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (242/252)  IGHV3-9*01   137  .............T................GT..C.......................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  F  Y  Y  C  T  R  D  I  L  D  C  S  G  
                    Query_534    181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGTTGAGGACACGGCCTTCTATTACTGTACAAGAGATATACTGGATTGTAGTGGTG  270
V  96.0% (242/252)  IGHV3-9*01   227  ....................................C...............G.........G...A.....------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  91.7% (22/24)    IGHD2-15*01  6    ------------------------------------------------------------------------------............  17

                                      -IMGT----------------------->                                 
                                      A  I  C  Y  F  L  A  F  D  S  W  G  Q  G  A  L  V  T  V  S  S 
                    Query_534    271  CTATCTGCTACTTCCTGGCTTTTGACTCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCA  332
D  91.7% (22/24)    IGHD2-15*01  18   G..G........--------------------------------------------------  29
J  95.2% (40/42)    IGHJ4*02     6    --------------------.......A.............A....................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_215756

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD6-19*01                                                                                           12.2    32   
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTGGC	GGCTGG	CTTAC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTGGCGGCTGGCTTACGGACGTC	TRGGGWLTDV	261	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	100	14	0	87.7
CDR3-IMGT (germline)	261	267	7	6	1	0	85.7
Total	N/A	N/A	267	242	25	0	90.6


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  F  Y  W  S  W  I  R  
                    Query_535    1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTGGTTTCTACTGGAGCTGGATTCGGC  90
V  90.6% (242/267)  IGHV4-59*01  26   ................T...................................T............A...A...............C....  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  N  I  H  Y  S  G  H  T  N  Y  N  P  S  L  R  S  R  V  I  
                    Query_535    91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGAATATCCACTACAGTGGGCACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCATCA  180
V  90.6% (242/267)  IGHV4-59*01  116  ................................T.....T.T.........AG.......................A...........C..  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  L  D  T  S  N  N  Q  I  S  L  K  V  D  S  G  T  A  A  D  T  A  L  Y  Y  C  T  R  G  
                    Query_535    181  TATCGCTGGACACGTCCAACAACCAGATCTCCCTGAAGGTGGACTCTGGGACCGCTGCGGACACGGCCCTCTATTATTGTACGAGAGGTG  270
V  90.6% (242/267)  IGHV4-59*01  206  ....AG.A...........G......T...........C..AG.....T...................G.G.....C...G......---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -CDR3-IMGT--------->                                 
                                      G  G  W  L  T  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_535    271  GCGGCTGGCTTACGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
D  100.0% (6/6)     IGHD6-19*01  13   --......---------------------------------------------  18
J  100.0% (40/40)   IGHJ6*02     23   -------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_215755

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           277     1e-76
IGHD2-15*01                                                                                           12.2    34   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTC	ATTGTA	T	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTCATTGTATTACGGTATGGACGTC	ARGVADDGWRGGRRVSLYYGMDV	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	211	34	0	86.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  H  C  W  T  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_536    1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTTAGTGGTCACTGCTGGACCTGGATTCGCCAGACACCAGGGAAGGGACTGGAA  90
V  86.1% (211/245)  IGHV4-34*01  49   ......................................C......T...A.....G......C......C.C...........G.....G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  M  N  H  K  G  R  T  T  Y  N  P  S  L  M  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_536    91   TGGATTGGTGAGATGAATCACAAAGGCAGGACGACCTACAACCCGTCGCTAATGAGTCGAGTCACCATCTCAGTGGACACGTCCAAGAAT  180
V  86.1% (211/245)  IGHV4-34*01  139  ........G..A..C.....T.GT..A..C..C.A............C..C.A...............A.....A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  L  S  L  R  L  T  S  L  I  A  A  D  T  A  M  Y  Y  C  A  R  G  V  A  D  D  G  W  R  G 
                    Query_536    181  CAGCTCTCCCTGAGATTGACCTCTTTAATCGCCGCGGACACGGCTATGTATTACTGTGCGAGAGGCGTGGCGGATGACGGGTGGCGGGGG  270
V  86.1% (211/245)  IGHV4-34*01  229  ...T.........AGC...G....G.G.C................G...................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      3-IMGT----------------------------->                                 
                                       G  R  R  V  S  L  Y  Y  G  M  D  V  W  G  Q  G  V  T  V  T  V  S  S 
                    Query_536    271  GGCAGACGCGTGTCATTGTATTACGGTATGGACGTCTGGGGCCAGGGAGTCACGGTCACCGTCTCCTCA  339
D  100.0% (6/6)     IGHD2-15*01  6    --------------......-------------------------------------------------  11
J  91.7% (44/48)    IGHJ6*02     15   ---------------------.......................A..GAC...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_215754

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            321     7e-90
IGHD1-26*01                                                                                           12.2    32   
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GCTACT	TGCGGTTTTCGGGCCAGCTTCTCTAT	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTACTTGCGGTTTTCGGGCCAGCTTCTCTATATGCTTTGGATATC	ARLLAVFGPASLYALDI	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_537    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAATAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.8% (225/245)  IGHV4-4*02   49   ..................G......................C....G...C.......................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  Q  I  H  H  N  G  S  T  T  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  K 
                    Query_537    91   GAGTGGATTGGGCAAATCCATCATAATGGGAGCACCACCTACAACCCCTCCCTTAAGAGTCGCGTCACCATATCATTGGACAAGTCCAAG  180
V  91.8% (225/245)  IGHV4-4*02   139  ............G.....T......G...........A.........G.....C........A............G.A............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       D  H  F  S  L  R  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  L  A  V  F  G  P  A 
                    Query_537    181  GACCACTTCTCCCTGAGGGTGACCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGGCTACTTGCGGTTTTCGGGCCAGCT  270
V  91.8% (225/245)  IGHV4-4*02   229  A....G..........A.C...G...............G...........G..............-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (6/6)     IGHD1-26*01  13   -----------------------------------------------------------------......-------------------  18

                                      -------------------->                                  
                                       S  L  Y  A  L  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_537    271  TCTCTATATGCTTTGGATATCTGGGGCCAAGGGACAATGGTCATCGTCTCCTCAG  325
J  93.8% (45/48)    IGHJ3*02     3    -------.......T............................C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_152568

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAATTC	CGGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTCCGGGATGGACGCC	ARGHRVSNGWGTYYNSGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_538    1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_538    91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_538    181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  S  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_538    271  TGGGGAACTTACTATAATTCCGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.3% (42/46)    IGHJ6*02     17   --------------------...T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_152564

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           332     3e-93
IGHD6-19*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCCAA	GTATAGAAGTGGC	ACCTACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCCAAGTATAGAAGTGGCACCTACTTTTGACTAT	AREPSIEVAPTFDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  T  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  R  R  
                    Query_539    4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCGTCAGTACTGGTGGCTACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAGGAGAC  93
V  92.4% (231/250)  IGHV4-61*08  50   .....TCC...A............................C.G......T...........C.................A....A.G...  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  
                    Query_539    94   TGGAGTGGATTGGCTATATCTATTACACTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACAAGTCGA  183
V  92.4% (231/250)  IGHV4-61*08  140  .............G.............G......C............................................A....C...C.  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  P  S  I  E  V  A  
                    Query_539    184  AGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGAGCCAAGTATAGAAGTGGCAC  273
V  92.4% (231/250)  IGHV4-61*08  230  ..................A.......................................C...........--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD6-19*01  3    ---------------------------------------------------------------------------......C......--  15

                                      ------------->                                  
                                      P  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_539    274  CTACTTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.7% (42/43)    IGHJ4*02     6    -----........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_152565

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            350     8e-99
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTACT	AGGCTATTGTAGCAGTACCAACTGCT	TTTCCCTCCCAGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTACTAGGCTATTGTAGCAGTACCAACTGCTTTTCCCTCCCAGCCTTTGACTAC	ARLLGYCSSTNCFSLPAFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_540   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-7*03  47   ........................................T.................................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  V  D  G  S  Q  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_540   91   AGTGGGTGGCCAACATAAAGGTAGATGGAAGTCAGACATATTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  95.2% (236/248)  IGHV3-7*03  137  ....................CA..........G...A...C............................................C....  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------------CD
                                     K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  L  L  G  Y  C  S  S  
                    Query_540   181  AGAATTCATTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGCGCGAGACTACTAGGCTATTGTAGCAGTA  270
V  95.2% (236/248)  IGHV3-7*03  227  ....C...C...A.......................................G........T......----------------------  294
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.5% (23/26)    IGHD2-2*01  1    -------------------------------------------------------------------------...A........T....  17

                                     R3-IMGT------------------------>                                  
                                     T  N  C  F  S  L  P  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_540   271  CCAACTGCTTTTCCCTCCCAGCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  88.5% (23/26)    IGHD2-2*01  18   ...G.....---------------------------------------------------------  26
J  100.0% (44/44)   IGHJ4*02    5    ----------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_152566

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           367     6e-104
IGHD6-6*01                                                                                            19.9    0.17  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTAG	GAACCTGGTCTTC	GAGTATAGAGGCTCGT	GGGACCAGATAAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGGAACCTGGTCTTCGAGTATAGAGGCTCGTGGGACCAGATAAAATACGGAATGGACGTC	TRNLVFEYRGSWDQIKYGMDV	249	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	244	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  D  D  Y  T  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_541    1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGATGATTATACTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (244/253)  IGHV3-49*04  47   ..........................................G.......G.......................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  L  I  E  S  K  A  Y  G  G  T  T  K  Y  A  A  S  V  K  A  R  F  T  I  S  R  D  
                    Query_541    91   AGTGGGTAGGTCTCATTGAAAGCAAAGCTTATGGTGGGACCACAAAATACGCCGCGTCTGTGAAAGCCAGATTCACCATCTCAAGAGATG  180
V  96.4% (244/253)  IGHV3-49*04  137  ...........T.....AG.....................A...G.....................G.......................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  R  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  N  L  V  F  E  
                    Query_541    181  ATTCCAGAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGGAACCTGGTCTTCGAGT  270
V  96.4% (244/253)  IGHV3-49*04  227  ......A..................................................................-----------------  299
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  87.5% (14/16)    IGHD6-6*01   1    --------------------------------------------------------------------------------------....  4

                                      -----CDR3-IMGT-------------------------->                                 
                                      Y  R  G  S  W  D  Q  I  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_541    271  ATAGAGGCTCGTGGGACCAGATAAAATACGGAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
D  87.5% (14/16)    IGHD6-6*01   5    ....CA......--------------------------------------------------------------  16
J  97.9% (47/48)    IGHJ6*02     15   --------------------------.....T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_152567

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           333     1e-93
IGHD3-3*01                                                                                            43.0    2e-08
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCCCCGCACC	TATTACGATTTTTGGAGTGGGTATT	CCAATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCCCCGCACCTATTACGATTTTTGGAGTGGGTATTCCAATAACTACAACTACGCTATGGACGTC	ARPRTYYDFWSGYSNNYNYAMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_542    1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGGTTCACCTTCAGTGACTACGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.1% (230/247)  IGHV3-30*03  47   .........................C.....A............AG...T........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  M  S  S  D  G  N  D  K  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_542    91   AGTGGGTGGCAGTTATGTCATCTGATGGAAATGACAAATACTTTGCAGACTCCGTGAAGGGCCGATTCACCATTTCCAGAGACAATTCCA  180
V  93.1% (230/247)  IGHV3-30*03  137  ................A....A........G.A.T.......A..............................C................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  G  D  D  T  A  V  Y  Y  C  A  R  P  R  T  Y  Y  D  F  
                    Query_542    181  AGAACACACTGTATTTGCAAATGAACAGCCTGAGAGGTGACGACACGGCTGTCTATTACTGTGCGAGGCCCCGCACCTATTACGATTTTT  270
V  93.1% (230/247)  IGHV3-30*03  227  .......G......C.....................C...G...........G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  96.0% (24/25)    IGHD3-3*01   2    -----------------------------------------------------------------------------.............  14

                                      --CDR3-IMGT----------------------------->                                 
                                      W  S  G  Y  S  N  N  Y  N  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_542    271  GGAGTGGGTATTCCAATAACTACAACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
D  96.0% (24/25)    IGHD3-3*01   15   .......T....--------------------------------------------------------------  26
J  96.4% (54/56)    IGHJ6*02     7    ------------------.....T......G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_152560

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD5-18*01                                                                                           18.0    0.57 
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCAT	GTGGATACA	ATTCCGT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCATGTGGATACAATTCCGTTACTACGGAATGGACGTC	ARGMWIQFRYYGMDV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	233	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_543    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTATTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (233/242)  IGHV4-59*01  49   ...............................G...............C..C.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  T  S  I  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_543    91   TGGATTGGGTATATCTTTTACAGTGGGACCTCCATCTACAACCCCTCACTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  96.3% (233/242)  IGHV4-59*01  139  ................A...........G.A...A............C........................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  M  W  I  Q  F  R  Y  Y 
                    Query_543    181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGGGCATGTGGATACAATTCCGTTACTAC  270
V  96.3% (233/242)  IGHV4-59*01  229  ..............................................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD5-18*01  1    --------------------------------------------------------------------.........-------------  9
J  96.1% (49/51)    IGHJ6*02     12   ------------------------------------------------------------------------------------......  17

                                      ----------->                                 
                                       G  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_543    271  GGAATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  315
J  96.1% (49/51)    IGHJ6*02     18   ..T..............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_152561

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           291     5e-81
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	213	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_544    1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  88.8% (213/240)  IGHV4-59*01  49   ..................A......................T.GT.A...C....G.............C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R 
                    Query_544    91   TGGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGA  180
V  88.8% (213/240)  IGHV4-59*01  139  .......GG.....C.ATT................C..C...........C.....................G.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G 
                    Query_544    181  CACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGT  270
V  88.8% (213/240)  IGHV4-59*01  229  ..G...........G....G............T..............G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-22*01  7    -----------------------------------------------------------------------------..........A..  19

                                      ----------------------->                                  
                                       G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_544    271  GGCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  328
D  93.3% (14/15)    IGHD3-22*01  20   ..--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    --------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_152562

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-20*01                                                                                           325     3e-91
IGHD3-10*01                                                                                           21.8    0.040
IGHJ6*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-20*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGGGCACTGGGT	TATTACTATGG	GAGCGGCGA	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGATGGGGCACTGGGTTATTACTATGGGAGCGGCGAC	VRDGALGYYYGSGD	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  P  F  G  D  F  G  M  R  W  A  R  Q  A  T  G  K  G  L  
                    Query_545    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCCCCTTTGGTGATTTTGGCATGCGCTGGGCCCGCCAAGCCACAGGGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-20*01  47   ................................T..A......A.....A.......A......T.........TC...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  H  W  N  G  E  S  T  A  Y  A  D  S  V  K  V  R  F  T  I  S  R  D  N  A  
                    Query_545    91   AGTGGGTCTCTGGTATTCATTGGAATGGTGAAAGTACCGCTTATGCAGACTCTGTGAAGGTCCGATTCACCATTTCCAGGGACAATGCCA  180
V  91.6% (229/250)  IGHV3-20*01  137  .................A............GT..C..A.G....................G............C.....A.....C....  226
                                      E  W  V  S  G  I  N  W  N  G  G  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  V  R  D  G  A  L  G  Y  Y  
                    Query_545    181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGGGCCGAGGACACGGCCTTGTATCACTGTGTGCGAGATGGGGCACTGGGTTATTACT  270
V  91.6% (229/250)  IGHV3-20*01  227  ..................................A............................C.A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R                       
D  100.0% (11/11)   IGHD3-10*01  2    -----------------------------------------------------------------------------------.......  8

                                      ------------->                                 
                                      Y  G  S  G  D  W  G  R  G  T  T  V  T  V  S  S 
                    Query_545    271  ATGGGAGCGGCGACTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  317
D  100.0% (11/11)   IGHD3-10*01  9    ....-------------------------------------------  12
J  97.1% (33/34)    IGHJ6*02     29   -------------........A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_222286

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD2-2*02                                                                                            12.2    32    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCA	CTGGTATAC	TTACGTCAGCGGGGGATATG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTGGTATACTTACGTCAGCGGGGGATATGTTGACTAC	ARGHWYTYVSGGYVDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_546    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.2% (243/250)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S 
                    Query_546    91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGCTACCATATCAGTAGACACGTCT  180
V  97.2% (243/250)  IGHV4-31*03  139  ................A.................G................................T......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  W  Y  T  Y  V 
                    Query_546    181  AAGAACCAGTTCTCCTTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCACTGGTATACTTACGTC  270
V  97.2% (243/250)  IGHV4-31*03  229  ...............C..........C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (8/9)      IGHD2-2*02   22   --------------------------------------------------------------------------...C.....-------  30

                                      GT------------------>                                  
                                       S  G  G  Y  V  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_546    271  AGCGGGGGATATGTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  325
J  97.6% (41/42)    IGHJ4*02     7    -------------.............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_222285

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           377     1e-106
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	ARPSSASGWHFDN	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	69	5	0	93.2
CDR1-IMGT	77	100	24	18	6	0	75
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	18	6	0	75
FR3-IMGT	176	289	114	106	8	0	93
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	267	26	0	91.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  
                    Query_547    3    AGGTCCAGCTGGTACAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCA  92
V  91.1% (267/293)  IGHV5-51*03  2    ....G........G...............G.............G.........................G.........C.GC..T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  D  I  R  Y  
                    Query_547    93   GTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGATATTAGATATA  182
V  91.1% (267/293)  IGHV5-51*03  92   .C..C.......G..................................................AT...GG...........CC.....C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_547    183  GTCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  91.1% (267/293)  IGHV5-51*03  182  .C...............................C..A.AA........G.........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  G  M  Y  Y  C  A  R  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_547    273  CCGGCATGTATTACTGTGCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  362
V  91.1% (267/293)  IGHV5-51*03  272  ...C...................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ----------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    ---------------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_222284

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           377     8e-107
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	242	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_548    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.6% (242/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_548    91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  99.6% (242/243)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_548    181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  99.6% (242/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_548    271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_250161

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         341     5e-96
IGHD5-12*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCGGGGAGGAT	TGGCTACGA	GACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGACCCCCTTTGACCTC	ARAGRIGYETPFDL	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_549      1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  94.3% (232/246)  IGHV4-38-2*01  49   ..............................TA................T.........................................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K 
                    Query_549      91   GAGTGGATTGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAG  180
V  94.3% (232/246)  IGHV4-38-2*01  139  ......................A.........C.........A..............A........................C.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  Q  F  S  L  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  T 
                    Query_549      181  AACCAGTTCTCGTTGAATCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGAGCGGGGAGGATTGGCTACGAGACC  270
V  94.3% (232/246)  IGHV4-38-2*01  229  ...........CC....G....G...........C...............G...............------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD5-12*01    11   -----------------------------------------------------------------------------.........----  19

                                        ----------->                                  
                                         P  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_549      271  CCCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.5% (42/44)    IGHJ4*02       5    --.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_222281

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           288     5e-80
IGHD3-22*01                                                                                           16.1    2.6  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGCGGCCCGGAACCGAC	AGTAGTGG	CCTCCC	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCGGCCCGGAACCGACAGTAGTGGCCTCCCCAATTGGTTCGACCCC	ARGRPGTDSSGLPNWFDP	287	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	58	12	0	82.9
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	172	27	19	5	3	70.4
FR3-IMGT	173	286	114	94	20	0	82.5
CDR3-IMGT (germline)	287	292	6	6	0	0	100
Total	N/A	N/A	292	240	49	3	82.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  A  V  R  R  S  G  D  S  L  K  I  S  C  K  T  S  G  Y  K  F  S  T  Y
                    Query_550    1    GCAGCTGGTGCAGTCTGGAGCAGCGGTGAGGAGGTCCGGAGACTCTCTGAAGATCTCTTGTAAGACCTCGGGATACAAGTTCTCCACATA  90
V  82.2% (240/292)  IGHV5-51*01  6    .......................A.....AA.A.C....G..G..............C......GGT..T.......GC..TA...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><--------CDR2-IMGT--------><-------
                                        G  I  A  W  V  R  Q  M  P  G  R  G  L  E  W  A  G  I  I  Y  P  S  D  S  K  N  V  R  Y  N
                    Query_550    91   CGGGATCGCCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGGCGGGAATCATCTATCCTAGTGACTCAAAGAATGTCAGATATAA  180
V  82.2% (240/292)  IGHV5-51*01  96   .T......G.......................A.............AT...G............G.......---TG..AC......C.G  182
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S     D  T  R  Y  S

                                      ---------------------------------------------FR3-IMGT-------------------------------------
                                        P  S  F  R  G  H  V  T  I  S  V  E  K  A  I  T  T  A  Y  L  E  W  D  S  L  E  T  S  D  S
                    Query_550    181  TCCGTCCTTCAGAGGCCACGTCACCATTTCCGTCGAGAAGGCCATCACCACCGCCTACCTGGAGTGGGACAGCCTGGAGACCTCGGACAG  270
V  82.2% (240/292)  IGHV5-51*01  183  C.........CA......G........C..A.C...C...T......G.............C.....AG.......A..G.........C  272
                                        P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T

                                      ---------------><----------------------CDR3-IMGT--------------------->                    
                                        G  I  Y  Y  C  A  R  G  R  P  G  T  D  S  S  G  L  P  N  W  F  D  P  W  G  Q  G  T  L  V
                    Query_550    271  CGGCATCTATTACTGTGCGAGAGGGCGGCCCGGAACCGACAGTAGTGGCCTCCCCAATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  360
V  82.2% (240/292)  IGHV5-51*01  273  ..C...G...............--------------------------------------------------------------------  294
                                        A  M  Y  Y  C  A  R                                                                     
D  100.0% (8/8)     IGHD3-22*01  14   ----------------------------------------........------------------------------------------  21
J  94.0% (47/50)    IGHJ5*02     2    ------------------------------------------------------...C................................  37

                                                    
                                        T  V  A  P  
                    Query_550    361  CACCGTCGCCCCAG  374
J  94.0% (47/50)    IGHJ5*02     38   .......T..T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_250160

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GGGCATCAGTGC	CTATGGTTCGGGGAG	CGC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGGGCATCAGTGCCTATGGTTCGGGGAGCGCTATGGACGTC	VKGISAYGSGSAMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	229	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_551    1    GGTCCCTGAGACTCTCGTGTGCAGCCTCTGGATTCACCTTTAGAAGCCATGCCATGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (229/247)  IGHV3-23*01  47   ................C..........................C...T...................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  N  G  G  T  T  H  Y  A  D  S  V  Q  G  R  S  I  I  S  R  D  N  S  
                    Query_551    91   AGTGGGTCTCAGTTATTAGTGGCAATGGTGGTACCACACATTACGCAGACTCCGTGCAGGGCCGGTCCATCATCTCCAGAGACAATTCCA  180
V  92.7% (229/247)  IGHV3-23*01  137  ............C.........T.G........G....T.C...............A.........T..C....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  T  L  R  A  G  D  T  A  V  Y  Y  C  V  K  G  I  S  A  Y  G  S  
                    Query_551    181  AGAACACCTTGTATCTGCAAATGAACACCCTGAGAGCCGGGGACACGGCCGTATATTACTGTGTGAAGGGCATCAGTGCCTATGGTTCGG  270
V  92.7% (229/247)  IGHV3-23*01  227  .......GC..................G...........A.......................C...-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (15/15)   IGHD3-10*01  7    -------------------------------------------------------------------------------...........  17

                                      ---------------->                                 
                                      G  S  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_551    271  GGAGCGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
D  100.0% (15/15)   IGHD3-10*01  18   ....----------------------------------------------  21
J  100.0% (43/43)   IGHJ6*02     20   -------...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_222289

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           344     6e-97
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGGGATCCT	GCAGTGGC	GGCAATTGCTACGGGGAGGACAAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGGGATCCTGCAGTGGCGGCAATTGCTACGGGGAGGACAAT	ARDRGSCSGGNCYGEDN	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  T  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_552    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCGGGATTCATCTTCAGTACCTATGCCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-30*03  47   ............................T.......C........G.....G...G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  N  N  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_552    91   AGTGGGTGGCAGTTATATCATATGATGGAAATAATATATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCA  180
V  94.0% (235/250)  IGHV3-30*03  137  ..............................G.....A...............................................A.....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  S  T  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  K  Y  Y  C  A  R  D  R  G  S  C  S  G  
                    Query_552    181  AGAGCACGGTGTTTCTGCAAATGAACAGCCTGAGAGCTGACGACACGGCTAAATATTACTGTGCGAGAGATCGGGGATCCTGCAGTGGCG  270
V  94.0% (235/250)  IGHV3-30*03  227  ...A....C...A...........................G.........GTG.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  8    ---------------------------------------------------------------------------------........-  15

                                      GT-------------------->                                  
                                      G  N  C  Y  G  E  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_552    271  GCAATTGCTACGGGGAGGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (34/34)   IGHJ4*02     15   -----------------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_222288

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           310     1e-86
IGHD6-19*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTGGTCGTC	AGCAGTGGCTGG	CCCTGGACGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGGTCGTCAGCAGTGGCTGGCCCTGGACGGC	ATGRQQWLALDG	261	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	19	5	0	79.2
FR2-IMGT	75	125	51	47	4	0	92.2
CDR2-IMGT	126	146	21	13	8	0	61.9
FR3-IMGT	147	260	114	101	13	0	88.6
CDR3-IMGT (germline)	261	264	4	4	0	0	100
Total	N/A	N/A	264	231	33	0	87.5


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  F  G  E  S  F  T  S  H  F  W  I  W  V  R  
                    Query_553    1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCGCTGTCTTTGGTGAGTCCTTCACTAGTCACTTCTGGATCTGGGTCCGCC  90
V  87.5% (231/264)  IGHV4-34*01  26   ........T.......T...............................A.....G........G.G..T...A.....G....A......  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  T  P  G  K  G  L  E  W  I  G  E  S  N  Q  R  Q  R  S  K  Y  N  P  S  L  K  S  R  V  T  
                    Query_553    91   AGACCCCCGGGAAGGGGCTGGAGTGGATTGGGGAAAGTAATCAGCGTCAAAGAAGCAAATACAATCCGTCCCTAAAGAGTCGAGTCACCA  180
V  87.5% (231/264)  IGHV4-34*01  116  ..C....A............................TC.....TA..GG...C.C...C.....C........C................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  L  G  D  T  S  K  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  
                    Query_553    181  TCTTAGGAGACACGTCCAAGAATCAGTTCTCTCTGAGGCTCAATTCTGTGACCGCCGCGGACACGGCTGTGTATTATTGTGCGACTGGTC  270
V  87.5% (231/264)  IGHV4-34*01  206  .A.C..T...............C........C....A...G.GC................................C.......------  289
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A        

                                      ----CDR3-IMGT------------>                                  
                                      R  Q  Q  W  L  A  L  D  G  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_553    271  GTCAGCAGTGGCTGGCCCTGGACGGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (12/12)   IGHD6-19*01  7    ---............---------------------------------------------  18
J  100.0% (35/35)   IGHJ4*02     14   -------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_39240

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            364     5e-103
IGHD3-22*01                                                                                           21.8    0.045 
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAGG	ATTACTTTGATAGGAGT	CGTCACGACGAATT	CGGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCAGGATTACTTTGATAGGAGTCGTCACGACGAATTCGGTCTGGACGTC	ARDQDYFDRSRHDEFGLDV	264	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	77	27	20	7	0	74.1
FR2-IMGT	78	128	51	51	0	0	100
CDR2-IMGT	129	149	21	19	2	0	90.5
FR3-IMGT	150	263	114	105	9	0	92.1
CDR3-IMGT (germline)	264	271	8	8	0	0	100
Total	N/A	N/A	271	252	19	0	93


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  D  S  F  S  G  D  N  W  W  S  W  V  
                    Query_554    1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCTTCAGTGGCGATAACTGGTGGAGTTGGGTCC  90
V  93.0% (252/271)  IGHV4-4*02   26   ................T.....................................G....A....CA.TAG....................  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  A  
                    Query_554    91   GCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAGTCTATGATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGCCA  180
V  93.0% (252/271)  IGHV4-4*02   116  ......................................A.....C..........................................T..  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      I  I  S  I  D  K  S  N  K  Q  F  S  L  T  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  
                    Query_554    181  TCATATCAATAGACAAGTCCAACAAACAGTTCTCCCTAACACTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAG  270
V  93.0% (252/271)  IGHV4-4*02   206  C.......G.............G..C...........G.AG....G............................................  295
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  

                                      -----------------CDR3-IMGT----------------------->                                 
                                      D  Q  D  Y  F  D  R  S  R  H  D  E  F  G  L  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_554    271  ACCAGGATTACTTTGATAGGAGTCGTCACGACGAATTCGGTCTGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  353
V  93.0% (252/271)  IGHV4-4*02   296  .----------------------------------------------------------------------------------  296
                                                                                                                         
D  88.2% (15/17)    IGHD3-22*01  3    ------......A......T...------------------------------------------------------------  19
J  95.7% (44/46)    IGHJ6*02     17   -------------------------------------....A.......................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_55116

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           341     5e-96
IGHD2-2*01                                                                                            27.6    8e-04
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAACATC	TTGTAGTAGTCCCAACTGCCATG	ACATAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAACATCTTGTAGTAGTCCCAACTGCCATGACATATACTACTTTGACTAC	ATTSCSSPNCHDIYYFDY	246	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	249	4	4	0	0	100
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_555    4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  94.3% (232/246)  IGHV4-31*01  50   .....TCC...A......................................T..........C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  F  H  T  G  G  T  Y  Y  N  P  S  L  K  S  L  A  T  I  S  L  D  T  S  
                    Query_555    94   TGGAGTGGATTGGGTACATCTTTCACACTGGGGGCACCTACTACAACCCGTCCCTCAAGAGTCTAGCTACCATATCACTAGACACGTCTA  183
V  94.3% (232/246)  IGHV4-31*01  140  .....................A.T...G....A.................................T..........G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  Q  F  S  L  T  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  T  S  C  S  S  P  N  
                    Query_555    184  AGAACCAGTTCTCCCTGACGCTGAGATCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGACAACATCTTGTAGTAGTCCCAACT  273
V  94.3% (232/246)  IGHV4-31*01  230  ..................A......C........................................------------------------  295
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  87.0% (20/23)    IGHD2-2*01   7    -------------------------------------------------------------------------..........A...G..  23

                                      IMGT--------------------->                                  
                                      C  H  D  I  Y  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_555    274  GCCATGACATATACTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  333
D  87.0% (20/23)    IGHD2-2*01   24   ..T...------------------------------------------------------  29
J  97.9% (47/48)    IGHJ4*02     1    ------------..........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_39243

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            339     1e-95
IGHJ2*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	N/A	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	GCACGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCACGGATCCTGGTGCATCGATTTC	ARHGSWCIDF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  E  A  S  G  F  T  F  N  T  Y  W  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_556   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAATACCTACTGGATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-7*03  47   .....................C....................G..G...T......A.................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  T  D  G  S  T  Q  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_556   91   AGTGGGTGGCCAACATAAAGACAGATGGAAGTACTCAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACCCCA  180
V  93.9% (232/247)  IGHV3-7*03  137  ....................CA..........GAGA..................................................G...  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                     T  N  S  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  H  G  S  W  C  I  D  
                    Query_556   181  CGAACTCACTGTATTTGCAACTGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGGCACGGATCCTGGTGCATCGATT  270
V  93.9% (232/247)  IGHV3-7*03  227  A.............C.....A..............................................-----------------------  293
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  92.0% (46/50)    IGHJ2*01    4    ----------------------------------------------------------------------------.....A.T.....C  17

                                     ->                                  
                                     F  W  G  R  G  T  L  V  S  V  S  S  
                    Query_556   271  TCTGGGGCCGTGGCACCCTGGTCAGTGTCTCCTCAG  306
J  92.0% (46/50)    IGHJ2*01    18   ........................C...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_39244

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            329     3e-92
IGHD4-17*01                                                                                           21.8    0.042
IGHJ6*01                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGA	ACGGTGACTAC	GTCCCCCAAGACCCGCAGAAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGAACGGTGACTACGTCCCCCAAGACCCGCAGAATTACTACTACTATGGCATGGACGTC	ARDRNGDYVPQDPQNYYYYGMDV	232	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	11	0	0	100
CDR1-IMGT	19	42	24	23	1	0	95.8
FR2-IMGT	43	93	51	50	1	0	98
CDR2-IMGT	94	117	24	20	4	0	83.3
FR3-IMGT	118	231	114	109	5	0	95.6
CDR3-IMGT (germline)	232	239	8	8	0	0	100
Total	N/A	N/A	232	221	11	0	95.3


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  N  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  H  I  
                    Query_557    8    GTGCAGCCTCTGGATTCACCTTTAGTAACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCCACATAA  97
V  95.3% (221/232)  IGHV3-7*01   65   ...........................G.......................................................A......  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      K  E  D  G  G  D  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  H  L  
                    Query_557    98   AGGAAGATGGAGGAGACAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAATTCGCTGCATCTGC  187
V  95.3% (221/232)  IGHV3-7*01   155  ..C........A.T..G...........................................................C..A...T......  244
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-----------------------------CDR3-IMGT-------
                                      Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  A  R  D  R  N  G  D  Y  V  P  Q  D  P  Q  N  
                    Query_557    188  AAATGAACAGCCTGACAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATAGGAACGGTGACTACGTCCCCCAAGACCCGCAGAATT  277
V  95.3% (221/232)  IGHV3-7*01   245  ...............G..................G.................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (11/11)   IGHD4-17*01  6    ---------------------------------------------------------...........----------------------  16
J  94.8% (55/58)    IGHJ6*01     6    -----------------------------------------------------------------------------------------.  6

                                      ---------------------->                                  
                                      Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S  
                    Query_557    278  ACTACTACTATGGCATGGACGTCTGGGGTCAAGGGACCACGGTCACCGTCTCCTCAG  334
J  94.8% (55/58)    IGHJ6*01     7    ..........C..T..............G............................  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_39245

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           332     4e-93
IGHD3-10*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGGTTCGAGCAGTTATT	CCTTCGCGCG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTTCGAGCAGTTATTCCTTCGCGCGCTACGGTATGGACGTC	ARDGSSSYSFARYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_558    1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACTTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-48*03  47   ....................G................C....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  G  G  G  R  T  I  L  Y  A  D  S  V  K  G  R  F  T  L  S  R  D  N  T  
                    Query_558    91   AGTGGGTTTCATACATTAGTGGCGGTGGAAGAACCATTTTATACGCAGACTCTGTGAAGGGCCGATTCACCTTGTCCAGAGACAACACCA  180
V  92.4% (231/250)  IGHV3-48*03  137  ....................A.TA....T..T.....A.AC..............................A.C............G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  T  A  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  S  S  Y  S  
                    Query_558    181  AGACCGCTCTGCATCTACAAATGAACAGCCTGAGAGCCGAAGACACGGCTGTTTATTACTGTGCGAGAGATGGTTCGAGCAGTTATTCCT  270
V  92.4% (231/250)  IGHV3-48*03  227  ...A.T.A...T....G.......................G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.2% (15/17)    IGHD3-10*01  10   ----------------------------------------------------------------------.......G.G.......---  26

                                      GT-------------------->                                 
                                      F  A  R  Y  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_558    271  TCGCGCGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  326
J  98.0% (48/49)    IGHJ6*02     14   -------......................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_39246

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           262     4e-72
IGHD2-15*01                                                                                           10.3    119  
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	ACATAATCCT	GCTGC	CAGAGGGGC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGACATAATCCTGCTGCCAGAGGGGCCAACTGGTTCGACCTC	ARGHNPAARGANWFDL	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	48	24	19	2	3	79.2
FR2-IMGT	49	99	51	45	6	0	88.2
CDR2-IMGT	100	120	21	18	3	0	85.7
FR3-IMGT	121	234	114	95	19	0	83.3
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	245	208	34	3	84.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  D  F  Y  G  G  S  F     D  S  Y  W  N  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_559    1    ACCCTGTCCCTCACCTGCGATTTTTATGGTGGGTCCTT---TGATTCCTACTGGAATTGGATCCGCCAGACTCCAGGGAAGGGGCTGGAG  87
V  84.9% (208/245)  IGHV4-34*01  49   ...................C.G.C..............CAG..G..A........GC............C.C..................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  N  R  A  G  S  T  N  F  N  P  S  L  E  S  R  L  T  I  S  V  D  T  S  T  K 
                    Query_559    88   TGGATTGCAGAAATCAATCGTGCTGGAAGCACCAACTTCAATCCGTCCCTCGAGAGTCGACTCACCATTTCAGTGGACACGTCCACGAAG  177
V  84.9% (208/245)  IGHV4-34*01  139  .......GG..........A.AG..............A...C.........A........G.......A.....A..........A...C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       R  F  S  L  R  L  N  S  L  N  A  A  D  T  G  V  Y  Y  C  A  R  G  H  N  P  A  A  R  G  A 
                    Query_559    178  CGATTCTCCCTGAGGCTAAATTCTCTTAACGCCGCAGACACGGGTGTGTATTACTGTGCGCGAGGACATAATCCTGCTGCCAGAGGGGCC  267
V  84.9% (208/245)  IGHV4-34*01  229  .AG..........A...G.GC...G.G.C......G.......C................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (5/5)     IGHD2-15*01  21   ---------------------------------------------------------------------------.....----------  25
J  96.0% (48/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  D  L  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_559    268  AACTGGTTCGACCTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  316
J  96.0% (48/50)    IGHJ5*02     3    .............C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_39247

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           389     2e-110
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ1*01                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGAGTGGCCAC	AGCAGCAGCTGGT	GGACAT	CTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGAGTGGCCACAGCAGCAGCTGGTGGACATCTGAGTACTTCCAGGAG	ARMSGHSSSWWTSEYFQE	292	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	71	3	0	95.9
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	104	10	0	91.2
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	271	22	0	92.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  P  
                    Query_560    5    AGATGCAGCTGGTGCAGTCTGGAGCAGAGCTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTCCCCG  94
V  92.5% (271/293)  IGHV5-51*03  2    ..G..........................G....A..................................................TA..A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      G  H  W  I  G  W  V  R  Q  T  P  G  K  G  L  E  W  M  G  L  I  Y  P  D  D  S  D  T  R  Y  
                    Query_560    95   GCCATTGGATCGGCTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGACTCATCTATCCTGATGACTCTGATACCAGATACA  184
V  92.5% (271/293)  IGHV5-51*03  92   ..T.C......................T...........................GA............G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  K  G  Q  V  T  I  S  V  D  K  S  I  N  T  A  F  L  R  W  A  S  L  K  A  S  D  
                    Query_560    185  GCCCGTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAACACCGCCTTCCTGCGCTGGGCCAGCCTGAAGGCCTCGGACA  274
V  92.5% (271/293)  IGHV5-51*03  182  ...........C.....................C..............G........A.....AG...AG....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------------CDR3-IMGT--------------------->                   
                                      S  G  M  Y  Y  C  A  R  M  S  G  H  S  S  S  W  W  T  S  E  Y  F  Q  E  W  G  Q  G  T  L  
                    Query_560    275  GCGGCATGTATTACTGTGCGAGAATGAGTGGCCACAGCAGCAGCTGGTGGACATCTGAGTACTTCCAGGAGTGGGGCCAGGGCACCCTGG  364
V  92.5% (271/293)  IGHV5-51*03  272  C..C...................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (13/13)   IGHD6-13*01  7    -----------------------------------.............------------------------------------------  19
J  92.2% (47/51)    IGHJ1*01     2    ------------------------------------------------------....A.........C.C...................  37

                                                     
                                      V  S  V  S  S  
                    Query_560    365  TCTCCGTCTCCTCAG  379
J  92.2% (47/51)    IGHJ1*01     38   ..A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_39248

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD1-26*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TTCCTGTCATC	AGTGGGAGC	CGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTCCTGTCATCAGTGGGAGCCGCGACTAC	AKLPVISGSRDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_561    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTCCTACTGGAGTTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  92.2% (225/244)  IGHV4-59*08  49   ...........................................G..A.........C.................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_561    91   TGGATCGGATATATCTATTCTAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGCGTCACCATCTCGGTAGACACGTCCAAGAAG  180
V  92.2% (225/244)  IGHV4-59*08  139  .....T..G..........AC..............C.......................A........A..A.................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  K  L  P  V  I  S  G  S  R  D 
                    Query_561    181  CAGTTCTCCCTGAAACTGAATTCTGTGACCGCCGCAGACTCGGCCGTCTATTACTGTGCGAAACTTCCTGTCATCAGTGGGAGCCGCGAC  270
V  92.2% (225/244)  IGHV4-59*08  229  ..............G....GC..................A.......G.............G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD1-26*01  6    ---------------------------------------------------------------------------.........------  14
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_561    271  TACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   ..............................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_55114

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            392     2e-111
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCG	GCAGTGGCTGGT	TCGGGGACC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCGGCAGTGGCTGGTTCGGGGACCTTGACTAC	ARDLGSGWFGDLDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  A  F  T  A  Y
                    Query_562    1    GCAGTTGGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACGCCTTCACCGCCTA  90
V  93.1% (271/291)  IGHV1-2*04   6    ....C.............G.....G...................................................A.........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  Y  T  G  A  T  N  Y  A  Q
                    Query_562    91   CTATATCCACTGGGTGCGACAGGCCCCCGGACAAGGGCTTGAGTGGATGGGTTGGATCAACCCTTACACTGGTGCCACAAACTATGCACA  180
V  93.1% (271/291)  IGHV1-2*04   96   ......G....................T.......................A............A...G.....G...............  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  Q  D  W  V  T  L  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  K  S  D  D  S  A
                    Query_562    181  GAACTTTCAAGACTGGGTCACCTTGACCAGGGACACGTCAATCAGCACTGCCTACATGGAACTGAGCAGGCTGAAATCTGACGACTCGGC  270
V  93.1% (271/291)  IGHV1-2*04   186  ...G.....G.G..........A................C........A...........G.............G..........A....  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  D  L  G  S  G  W  F  G  D  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_562    271  CGTGTATTACTGTGCGAGAGATCTCGGCAGTGGCTGGTTCGGGGACCTTGACTACTGGGGCCAGGGAACACTAGTCACCGTCTCCTCAG  359
V  93.1% (271/291)  IGHV1-2*04   276  .....................--------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                       
D  100.0% (12/12)   IGHD6-19*01  8    --------------------------............---------------------------------------------------  19
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------------------......................C..G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_146190

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           369     2e-104
IGHD6-19*01                                                                                           18.0    0.66  
IGHJ5*01                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD6-19*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCG	AGCAGTGTCTGG	GACATAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGCAGTGTCTGGGACATATTGGTTCGACTCC	ARDRAVSGTYWFDS	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	70	5	0	93.3
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	100	14	0	87.7
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	266	30	0	89.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  X  G  S  S  V  K  V  S  X  K  A  S  R  G  T  F  S 
                    Query_563    1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGNCTGGGTCCTCGGTGAAGGTCTCCTNNAAGGCTTCTCGAGGCACCTTCAGC  90
V  89.9% (266/296)  IGHV1-69*06  1    ...G...................G...............C........................GC.........G..............  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       A  F  G  L  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  N  Y 
                    Query_563    91   GCCTTTGGTCTCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGATCATCCCGATATTTGGGACAACAAACTAC  180
V  89.9% (266/296)  IGHV1-69*06  91   AG..A..C.A...............................G..........................T..C.....T...G........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       P  Q  K  F  Q  D  R  V  T  I  S  A  D  K  S  T  S  T  V  Y  M  E  V  T  S  L  K  S  D  D 
                    Query_563    181  CCACAGAAATTCCAGGACAGAGTCACGATTAGCGCGGACAAGTCCACGAGCACAGTGTACATGGAGGTGACCAGCCTGAAATCTGACGAC  270
V  89.9% (266/296)  IGHV1-69*06  181  G.......G.......G..............C.........A.............CC.........C...G........G......G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  I  Y  Y  C  A  R  D  R  A  V  S  G  T  Y  W  F  D  S  W  G  Q  G  T  L  V  I  V  S 
                    Query_563    271  ACGGCCATATATTACTGCGCGAGAGATCGAGCAGTGTCTGGGACATATTGGTTCGACTCCTGGGGCCAGGGAACCCTGGTCATCGTCTCC  360
V  89.9% (266/296)  IGHV1-69*06  271  ......G.G........T........----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  91.7% (11/12)    IGHD6-19*01  7    -----------------------------.......G....-------------------------------------------------  18
J  95.7% (44/46)    IGHJ5*01     6    ------------------------------------------------....................A.............C.......  47

                                          
                                       S  
                    Query_563    361  TCAG  364
J  95.7% (44/46)    IGHJ5*01     48   ....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_146191

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           338     5e-95
IGHD3-22*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GTGTCGCCTCC	TATTATTATGACAGT	GATGGCTATGGTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGTCGCCTCCTATTATTATGACAGTGATGGCTATGGTCCCTACTACTCCAGTATGGACGTC	ASVASYYYDSDGYGPYYSSMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_564    1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTTACCTTCAATACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  93.9% (231/246)  IGHV3-33*03  47   ..................................C.......G..G.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  E  N  S  
                    Query_564    91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTACTACTTACTATGCAGATTCTGTGAAGGGCCGATTCACCATCTCCAGAGAGAACTCCA  180
V  93.9% (231/246)  IGHV3-33*03  137  .................................A..AA...........C..C.............................C.......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  G  V  Y  F  C  A  S  V  A  S  Y  Y  Y  D  
                    Query_564    181  AGAACACCCTGTACCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGGTGTATATTTCTGTGCGAGTGTCGCCTCCTATTATTATGACA  270
V  93.9% (231/246)  IGHV3-33*03  227  .......G.....T..................................C...G....A........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  86.7% (13/15)    IGHD3-22*01  2    -----------------------------------------------------------------------------.....C.....T.  14

                                      -CDR3-IMGT--------------------------->                                 
                                      S  D  G  Y  G  P  Y  Y  S  S  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_564    271  GTGATGGCTATGGTCCCTACTACTCCAGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  86.7% (13/15)    IGHD3-22*01  15   ..---------------------------------------------------------------------  16
J  96.4% (53/55)    IGHJ6*02     8    ----------------........A.G............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_146192

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATGATC	GTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATCGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDRGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_565    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAGTTA  90
V  94.8% (276/291)  IGHV5-51*01  6    .................................................................G.....................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  I  M  Y  P  D  D  S  D  I  R  Y  S  P
                    Query_565    91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATCGGGATCATGTATCCTGATGACTCTGATATCAGATACAGCCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ........G.......................................G........C.......G...........C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  G  T  A  Y  L  Q  W  R  S  L  K  A  W  D  S  A
                    Query_565    181  GTCTTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCGGCACCGCCTACCTGCAGTGGAGGAGCCTGAAGGCCTGGGACTCCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  ...C...C...................................A......................C.............C....A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  F  C  A  R  H  G  D  D  R  G  S  Y  L  Y  Y  F  Y  G  M  D  V  C  G  P  G  T  T  V
                    Query_565    271  CATATATTTCTGTGCGAGACATGGGGATGATCGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGTGGCCCGGGGACCACGGT  360
V  94.8% (276/291)  IGHV5-51*01  276  ...G....A............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  90.9% (10/11)    IGHD1-26*01  7    --------------------------------.......C...-----------------------------------------------  17
J  93.0% (53/57)    IGHJ6*02     6    ----------------------------------------------.......A..................G....AA...........  49

                                                   
                                        T  V  S  S 
                    Query_565    361  CACCGTCTCCTCA  373
J  93.0% (53/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_181831

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           403     1e-114
IGHD4-17*01                                                                                           18.0    0.68  
IGHJ6*01                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAG	CTACGGTGA	GTCCGAGTACTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTC	ARDLATVSPSTFYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  T  S  Y 
                    Query_566    2    CAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCTTCTGGTTACACCTTTACCAGTTAC  91
V  94.5% (274/290)  IGHV1-18*04  7    ....................T..........................................G......................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_566    92   GGTATCACTTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  181
V  94.5% (274/290)  IGHV1-18*04  97   .......GC........A..............A................................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  S  D  D  T  A 
                    Query_566    182  ATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.5% (274/290)  IGHV1-18*04  187  .A.C...A..G.................C....................C..........C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  T  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_566    272  GTGTATTACTGTGCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTCTGGGGTCAAGGGACCACGGTCACC  361
V  94.5% (274/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------.........--------------------------------------------------------  12
J  98.1% (52/53)    IGHJ6*01     11   -----------------------------------------------........................G..................  53

                                                
                                       V  S  S  
                    Query_566    362  GTCTCCTCAG  371
J  98.1% (52/53)    IGHJ6*01     54   ..........  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_146194

Length=410
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           353     1e-99
IGHD2-15*01                                                                                           14.1    10   
IGHJ5*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGTCCCCCTTTAAAATTT	GATATTG	ATGGTTTCCCTGAGGCCCCCGCGAT	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGTCCCCCTTTAAAATTTGATATTGATGGTTTCCCTGAGGCCCCCGCGATCTGGCTCGACCCC	ARSPPLKFDIDGFPEAPAIWLDP	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	257	31	0	89.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  S  S  V  K  V  S  C  R  A  S  G  G  T  F  G  T  Y
                    Query_567    1    GCAGCTGGTGCAGTCTGGAGCTGAGATGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGGCTTCTGGAGGCACCTTCGGTACCTA  90
V  89.2% (257/288)  IGHV1-69*06  6    ..................G......G....................................A...................A.C.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  V  T  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  G  F  I  P  I  F  G  T  A  N  N  T  Q
                    Query_567    91   TGGAGTGACCTGGGTGCGGCAGGCCCCGGGACAACGACTTGAGTGGATGGGAGGGTTCATCCCCATCTTTGGAACAGCAAACAACACACA  180
V  89.2% (257/288)  IGHV1-69*06  96   ..CTA.C.G.........A........T......G.G..................A.......T........T.........T..G....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  M  D  K  A  T  N  T  A  Y  M  E  L  S  R  L  T  S  D  D  T  A
                    Query_567    181  GAAGTTCCAGGGCAGAGTCACGATCACCATGGACAAAGCCACGAACACAGCCTACATGGAGCTGAGCAGGCTGACTTCTGACGACACGGC  270
V  89.2% (257/288)  IGHV1-69*06  186  ........................T...GC.......T......G........................C....GA.....G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        I  Y  Y  C  A  R  S  P  P  L  K  F  D  I  D  G  F  P  E  A  P  A  I  W  L  D  P  W  G  Q
                    Query_567    271  CATCTATTACTGTGCGAGGAGTCCCCCTTTAAAATTTGATATTGATGGTTTCCCTGAGGCCCCCGCGATCTGGCTCGACCCCTGGGGCCA  360
V  89.2% (257/288)  IGHV1-69*06  276  .G.G..............------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  100.0% (7/7)     IGHD2-15*01  3    -------------------------------------.......----------------------------------------------  9
J  97.9% (46/47)    IGHJ5*02     5    ---------------------------------------------------------------------....T................  25

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_567    361  GGGAACCCTGGTCACCGTCTCCTCAG  386
J  97.9% (46/47)    IGHJ5*02     26   ..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40183344


Query= Query_146195

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           321     6e-90
IGHD3-16*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	GGTGGAAATTA	TTTGGGG	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGTGGAAATTATTTGGGGGGTATGGACGTC	AGGNYLGGMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  Y  Y  T  M  Y  W  V  R  Q  V  P  G  R  G  L  
                    Query_568    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATTATTATACCATGTACTGGGTCCGTCAAGTTCCGGGGAGGGGTCTGG  90
V  91.8% (225/245)  IGHV3-43*01  47   ............................................G...........C...............C........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  I  S  W  D  G  E  T  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  G  
                    Query_568    91   AGTGGGTCTCTCTTATTAGTTGGGATGGTGAGACTACAGACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACACCGGCA  180
V  91.8% (225/245)  IGHV3-43*01  137  ..............................GT.GC...T.............................................A.A...  226
                                      E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  R  S  L  F  L  Q  M  N  S  L  I  S  E  D  T  A  L  Y  Y  C  A  G  G  N  Y  L  G  G  M  
                    Query_568    181  AAAGGTCCCTCTTTCTGCAGATGAACAGTCTGATAAGTGAAGACACCGCCTTATATTACTGTGCAGGTGGAAATTATTTGGGGGGTATGG  270
V  91.8% (225/245)  IGHV3-43*01  227  ...AC.....G.A......A.............G..C...G...........G............-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  15   ----------------------------------------------------------------------------.......-------  21
J  97.8% (44/45)    IGHJ6*02     18   -----------------------------------------------------------------------------------.......  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_568    271  ACGTCTGGGGCCAAGGGACAACGGTCACCGTCTCCTCA  308
J  97.8% (44/45)    IGHJ6*02     25   ...................C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_146196

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAGTTAT	CAGGGT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGGCTCCACCCC	ARSGSGSYQGWLHP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	222	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  P  Y  Y  W  I  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_569    1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGTCCTTACTACTGGATCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.7% (222/242)  IGHV4-59*01  49   ..................A............G..........AG...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  H  I  F  Y  T  G  S  T  K  Y  K  P  S  L  K  S  R  F  T  I  S  L  D  T  S  R  K 
                    Query_569    91   TGGCTTGGCCATATCTTTTACACTGGGAGCACCAAATACAAGCCCTCCCTCAAGAGTCGATTCACCATTTCACTAGACACGTCCAGGAAG  180
V  91.7% (222/242)  IGHV4-59*01  139  ...A....GT......A.....G............C.....C..................G.......A...G............A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  S  Y  Q  G  W 
                    Query_569    181  CAGTTCTCCCTGAAACTGCGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGG  270
V  91.7% (222/242)  IGHV4-59*01  229  ..............G...A.C.........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (15/15)   IGHD3-10*01  11   ------------------------------------------------------------------...............---------  25
J  87.0% (40/46)    IGHJ5*02     6    ---------------------------------------------------------------------------------------...  8

                                      -------->                                  
                                       L  H  P  W  G  L  G  R  L  V  I  V  S  S  
                    Query_569    271  CTCCACCCCTGGGGCCTGGGAAGACTGGTCATCGTCTCCTCAG  313
J  87.0% (40/46)    IGHJ5*02     9    T..G............A.....CC.......C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_146198

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           311     4e-87
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	N/A	TCGACCCTGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCGACCCTGCTTGACAAA	ASTLLDK	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_570    1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTGACTTTGGCATGCATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.6% (222/245)  IGHV3-23*01  47   .........................C..............T..CAG..A..C....AGC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  T  G  I  S  G  S  G  E  N  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_570    91   AGTGGGTCACAGGTATCAGTGGTAGTGGTGAAAACACATACTACGCAGACTCCGTGAAGGGCCGTTTCACCGTCTCCAGAGACAATTCCA  180
V  90.6% (222/245)  IGHV3-23*01  137  ........T...C...T.............GT.G..............................G......A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  T  V  S  V  Q  M  D  S  L  S  A  E  D  T  A  V  Y  Y  C  A  S  T  L  L  D  K  W  G  
                    Query_570    181  AGAACACGGTGTCTGTGCAAATGGACAGCCTGAGCGCCGAGGACACGGCCGTATATTACTGTGCGTCGACCCTGCTTGACAAATGGGGCC  270
V  90.6% (222/245)  IGHV3-23*01  227  ........C...A.C........A..........A..............................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  94.7% (36/38)    IGHJ4*02     7    ---------------------------------------------------------------------------.....T.C.......  21

                                                             
                                      Q  G  T  L  V  T  V  S 
                    Query_570    271  AGGGAACCCTGGTCACCGTCTCC  293
J  94.7% (36/38)    IGHJ4*02     22   .......................  44


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_146199

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            319     2e-89
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCTACCCC	CGATTTTTGGAGTGGT	GGTCGCATC	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTACCCCCGATTTTTGGAGTGGTGGTCGCATCACGGTCTGGACGCC	ARLYPRFLEWWSHHGLDA	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_571   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGTTATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (226/248)  IGHV3-7*01  47   ...........................................T..C..........G................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  I  I  K  Q  D  G  I  E  K  F  Y  A  D  S  V  K  G  R  F  S  V  S  K  D  N  A  
                    Query_571   91   AGTGGGTGGCCATTATTAAGCAAGATGGAATTGAGAAGTTCTATGCGGACTCTGTGAAGGGCCGATTCTCTGTCTCCAAAGACAACGCCG  180
V  91.1% (226/248)  IGHV3-7*01  137  ............AC..A.............G......A.A.....T......................A.CA......G..........A  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                     G  N  S  L  S  L  Q  M  D  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  L  Y  P  R  F  L  E  
                    Query_571   181  GGAATTCACTGTCTCTGCAAATGGACAGCCTGAGAGCCGACGACACGGCTGTCTATTATTGTGCGAGACTCTACCCCCGATTTTTGGAGT  270
V  91.1% (226/248)  IGHV3-7*01  227  A...C.......A..........A................G...........G.....C.........----------------------  294
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (16/16)   IGHD3-3*01  7    -----------------------------------------------------------------------------.............  19

                                     IMGT--------------------->                                 
                                     W  W  S  H  H  G  L  D  A  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_571   271  GGTGGTCGCATCACGGTCTGGACGCCTGGGGCCAAGGGACCACGGTCATCGTCTCTTCA  329
D  100.0% (16/16)   IGHD3-3*01  20   ...--------------------------------------------------------  22
J  91.5% (43/47)    IGHJ6*02    16   ------------.....A......T.......................C......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_55113

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           439     2e-125
IGHD3-16*01                                                                                           12.2    35    
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTTGAGG	GATTAC	CAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTAC	ARSLRDYQPFYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	285	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_572    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  98.6% (285/289)  IGHV5-51*03  6    .............................................................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_572    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.6% (285/289)  IGHV5-51*03  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_572    181  GTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACTGC  270
V  98.6% (285/289)  IGHV5-51*03  186  ......................A................................................................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  S  L  R  D  Y  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_572    271  CATGTATTACTGTGCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  359
V  98.6% (285/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  8    ----------------------------......-------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ------------------------------------------....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_55111

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD3-3*01                                                                                            23.8    0.011
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCAATCGAGGC	TTTTGGAGTGGT	CGGGGGCCCCTTATCGC	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCAATCGAGGCTTTTGGAGTGGTCGGGGGCCCCTTATCGCTACTTCGATCTC	AREQSRLLEWSGAPYRYFDL	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_573    1    ACCCTGTCCCTCACCTGCACTGTCTCGGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATTCGGCAGGCCCCAGGGAAGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   ..........................T...................................C......C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  Y  S  R  G  R  T  N  Y  N  P  A  L  T  T  R  V  T  I  S  A  D  S  S  K  N 
                    Query_573    91   TGGATTGGATATTTCTATAGCAGAGGCAGGACGAACTACAACCCCGCCCTCACGACTCGAGTCACCATATCAGCAGACTCGTCCAAGAAC  180
V  92.2% (226/245)  IGHV4-59*01  139  ........G...A.....TA...T..G..C..C............T......A..G.................T....A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  Q  S  R  L  L  E  W  S 
                    Query_573    181  CAGTTCTCCCTGAAGCTCAGCTCTGTTACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGAGCAATCGAGGCTTTTGGAGTGGTCG  270
V  92.2% (226/245)  IGHV4-59*01  229  .................G........G....................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD3-3*01   11   ----------------------------------------------------------------------------............--  22

                                      GT------------------------>                                  
                                       G  A  P  Y  R  Y  F  D  L  W  G  R  G  T  Q  V  T  V  S  S  
                    Query_573    271  GGGGCCCCTTATCGCTACTTCGATCTCTGGGGCCGTGGCACCCAGGTCACTGTCTCCTCAG  331
J  97.8% (45/46)    IGHJ2*01     8    ---------------............................T.................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_12797

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           347     8e-98
IGHD2-21*02                                                                                           18.0    0.65 
IGHJ4*02                                                                                              44.9    1e-08


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACGG	GGTGGGGACTACTAT	GGTCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACGACGGGGTGGGGACTACTATGGTCCATTTGAGTTC	VRRRGGDYYGPFEF	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	256	34	0	88.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  E  I  S  C  K  A  Y  G  Y  A  F  N  D  Y
                    Query_574    1    GCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCCGGGGAGTCTCTGGAGATCTCCTGTAAGGCTTATGGATACGCCTTTAACGACTA  90
V  88.3% (256/290)  IGHV5-51*01  6    ........................G........................A...............G..C.......AG.....C.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  E  K  G  L  D  W  M  G  V  L  Y  P  D  D  L  D  T  T  Y  S  P
                    Query_574    91   CTGGATCGGCTGGGTGCGCCAGAAGCCCGAGAAAGGCCTGGATTGGATGGGGGTCCTCTACCCTGATGACCTTGATACGACATACAGTCC  180
V  88.3% (256/290)  IGHV5-51*01  96   .......................T.....G............G.........A..A....T....G....TC......C.G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  N  T  I  Y  L  R  W  S  S  L  K  A  S  A  P  A
                    Query_574    181  GTCCTTCCAAGGCCAGGTCACAATCTCAGTCGACAAGTCCATCAACACCATCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGCCCCCGC  270
V  88.3% (256/290)  IGHV5-51*01  186  .....................C.......C..............G....GC........A.......................A.A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                
                                        I  Y  S  C  V  R  R  R  G  G  D  Y  Y  G  P  F  E  F  W  G  Q  G  T  Q  F  P  V  P  S
                    Query_574    271  TATTTATTCTTGTGTGAGACGACGGGGTGGGGACTACTATGGTCCATTTGAGTTCTGGGGCCAGGGAACCCAGTTCCCCGTCCCCTC  357
V  88.3% (256/290)  IGHV5-51*01  276  C..G....AC....C.....-------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                     
D  86.7% (13/15)    IGHD2-21*02  11   -------------------------.....T....G....-----------------------------------------------  25
J  85.4% (35/41)    IGHJ4*02     6    ----------------------------------------------.....C.A.................T.G..A.....T....  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_130

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           363     1e-102
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CAC	TATTCCTATGGTTCGAGGAGT	GC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACACTATTCCTATGGTTCGAGGAGTGCTTGACTTT	AKDTIPMVRGVLDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  S  S  H  A  M  S  W  A  R  Q  A  P  G  K  G  L  
                    Query_575    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTAGCAGCCATGCCATGAGCTGGGCCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-23*01  47   ................................T..............T...............T..........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_575    91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGGCACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  96.4% (241/250)  IGHV3-23*01  137  ...............................T.G...................................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  H  M  S  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  D  T  I  P  M  V  R  
                    Query_575    181  AGAACACGCTGTATCTGCACATGAGCAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGACACTATTCCTATGGTTCGAG  270
V  96.4% (241/250)  IGHV3-23*01  227  ...................A....A.........................G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.5% (19/21)    IGHD3-10*01  2    -------------------------------------------------------------------------....A..........G.  18

                                      ------------->                                  
                                      G  V  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_575    271  GAGTGCTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  90.5% (19/21)    IGHD3-10*01  19   ....--------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    ------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_98832

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*08                                                                                           335     4e-94
IGHD1-26*01                                                                                           12.2    35   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*08	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTCTGGATCTCT	TGGGAG	GCGGCAG	TGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCTGGATCTCTTGGGAGGCGGCAGTGACGAC	ATLDLLGGGSDD	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	69	6	0	92
CDR1-IMGT	76	99	24	18	6	0	75
FR2-IMGT	100	150	51	42	9	0	82.4
CDR2-IMGT	151	174	24	18	6	0	75
FR3-IMGT	175	288	114	102	12	0	89.5
CDR3-IMGT (germline)	289	292	4	4	0	0	100
Total	N/A	N/A	292	253	39	0	86.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  R  K  T  S  R  A  T  F  S 
                    Query_576    1    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCCGCAAGACTTCCAGAGCCACTTTCAGC  90
V  86.6% (253/292)  IGHV1-69*08  1    ...........G.....A.....G.......................................T.....G....TG...G...C......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  N  T  F  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  A  I  I  P  T  L  R  T  T  Y  Y 
                    Query_576    91   AGCAACACCTTCACTTGGGTGCGCCAGGCCCCGGGACAAGGGCTTGAGTGGATGGGGGCCATCATCCCCACCCTGCGAACAACATACTAC  180
V  86.6% (253/292)  IGHV1-69*08  91   ...T.T..TA...GC........A........T.......................AAGG........T.T...TG.T...G..A.....  180
                                       S  Y  T  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  H  G  R  V  T  I  T  A  D  R  S  T  S  T  T  Y  M  E  L  S  G  L  T  S  E  D 
                    Query_576    181  GCACAGAAGTTCCATGGCAGAGTCACCATTACCGCGGACAGATCTACGAGCACAACCTATATGGAACTGAGCGGTCTGACCTCTGAGGAC  270
V  86.6% (253/292)  IGHV1-69*08  181  ..............G...........G.............A...C.........G....C.....G......A.C....GA.........  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  V  Y  Y  C  A  T  L  D  L  L  G  G  G  S  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_576    271  ACGGCCGTGTATTACTGTGCGACTCTGGATCTCTTGGGAGGCGGCAGTGACGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  86.6% (253/292)  IGHV1-69*08  271  ......................------------------------------------------------------------------  292
                                       T  A  V  Y  Y  C  A                                                                    
D  100.0% (6/6)     IGHD1-26*01  8    ----------------------------------......------------------------------------------------  13
J  97.6% (40/41)    IGHJ4*02     8    -----------------------------------------------....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_132

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           266     2e-73
IGHD3-3*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTCAA	GGAGTTCC	AGTAGTTATTAT	GTCGGGTTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGGAGTTCCAGTAGTTATTATGTCGGGTTGGACTACTTTGAAAAC	SRSSSSYYVGLDYFEN	234	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	18	6	0	75
FR2-IMGT	48	98	51	47	4	0	92.2
CDR2-IMGT	99	119	24	18	3	3	75
FR3-IMGT	120	233	114	104	10	0	91.2
CDR3-IMGT (germline)	234	237	4	3	1	0	75
Total	N/A	N/A	228	201	24	3	88.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  D  D  N  S  F  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  F  I  
                    Query_577    13   GTGCAGCCTCTGGATTCACGTTCGATGACAATAGTTTCCACTGGGTCCGTCAAGCTCCGGGGAAGGGTCTGGAGTGGGTCTCTTTCATTG  102
V  88.2% (201/228)  IGHV3-43*01  65   ...................C..T.....TT...CCA.G.............................................C.T...A  154
                                         A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  L  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      G  W  D  G     T  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  D  N  P  L  F  L  
                    Query_577    103  GTTGGGATGGG---ACCACAGACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCGACAACCCCCTCTTTCTGC  189
V  88.2% (201/228)  IGHV3-43*01  155  ..........TGGT.G....T..................................................A.A...T....G.A.....  244
                                      S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  S  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  T  G  L  R  I  E  D  T  A  L  Y  Y  C  S  R  S  S  S  S  Y  Y  V  G  L  D  Y  F  E  
                    Query_577    190  AAATGACTGGTCTGAGAATTGAGGACACCGCCTTGTATTACTGTTCAAGGAGTTCCAGTAGTTATTATGTCGGGTTGGACTACTTTGAAA  279
V  88.2% (201/228)  IGHV3-43*01  245  ......ACA.........C.........................G...------------------------------------------  292
                                      Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A                                            
D  91.7% (11/12)    IGHD3-3*01   17   --------------------------------------------------------...G........----------------------  28
J  95.8% (46/48)    IGHJ4*02     1    ------------------------------------------------------------------------------..........CT  12

                                      ->                                  
                                      N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_577    280  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  95.8% (46/48)    IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_12796

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           332     3e-93
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	GTCAAGAGAC	CTATGG	CCTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGTCAAGAGACCTATGGCCTCACTACTTTGACCAC	ARESRDLWPHYFDH	239	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	48	3	0	94.1
CDR2-IMGT	101	124	24	23	1	0	95.8
FR3-IMGT	125	238	114	111	3	0	97.4
CDR3-IMGT (germline)	239	246	8	7	1	0	87.5
Total	N/A	N/A	232	222	10	0	95.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  H  I  
                    Query_578    15   GTGCAGCCTCTGGATTCACCTTTAGTAGTTACGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCACATATTA  104
V  95.7% (222/232)  IGHV3-48*03  65   ......................C........T........C..........................................T.C....  154
                                         A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  S  G  S  I  I  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  K  N  S  L  Y  L  
                    Query_578    105  GTAGTAGTGGTAGTATCATACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCAAGAACTCACTGTATCTGC  194
V  95.7% (222/232)  IGHV3-48*03  155  ...............C....T...............................................G.....................  244
                                      S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  E  S  R  D  L  W  P  H  Y  F  D  H  W  
                    Query_578    195  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTTCTGTGCGAGGGAGTCAAGAGACCTATGGCCTCACTACTTTGACCACTGGG  284
V  95.7% (222/232)  IGHV3-48*03  245  .......................................A.........A..--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (6/6)     IGHD3-10*01  7    --------------------------------------------------------------......----------------------  12
J  93.8% (45/48)    IGHJ4*02     1    ------------------------------------------------------------------------...........T......  18

                                                                    
                                      G  Q  G  A  L  V  T  V  S  S  
                    Query_578    285  GCCAGGGAGCCTTGGTCACCGTCTCCTCAG  314
J  93.8% (45/48)    IGHJ4*02     19   ........A..C..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_162268

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           400     9e-114
IGHD1-20*01                                                                                           14.1    9.3   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGAATACAA	GTATAAC	GGAATA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGAATACAAGTATAACGGAATAGGTATGGACGTC	TRSEYKYNGIGMDV	281	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	166	21	19	2	0	90.5
FR3-IMGT	167	280	114	108	6	0	94.7
CDR3-IMGT (germline)	281	286	6	5	1	0	83.3
Total	N/A	N/A	286	271	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  N
                    Query_579    1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTAAGTAATAA  90
V  94.8% (271/286)  IGHV3-53*01  6    ..........G......................................................................C....GC..  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  T  T  Y  Y  A  D  S
                    Query_579    91   TTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATAGTGGTGGTACCACATACTACGCAGACTC  180
V  94.8% (271/286)  IGHV3-53*01  96   C.......G......................................................C.......G..................  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  T  T  L  Y  L  Q  M  N  S  L  R  A  E  D  S  A  V
                    Query_579    181  CGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGACCACACTGTATCTTCAAATGAACAGTTTGAGAGCCGAGGACTCGGCCGT  270
V  94.8% (271/286)  IGHV3-53*01  186  ............A............................A...G....................CC..............A.......  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><----------------CDR3-IMGT--------------->                                 
                                        Y  Y  C  T  R  S  E  Y  K  Y  N  G  I  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_579    271  GTATTACTGTACGAGATCAGAATACAAGTATAACGGAATAGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  355
V  94.8% (271/286)  IGHV3-53*01  276  ..........G.....---------------------------------------------------------------------  291
                                        Y  Y  C  A  R                                                                      
D  100.0% (7/7)     IGHD1-20*01  2    ---------------------------.......---------------------------------------------------  8
J  100.0% (45/45)   IGHJ6*02     18   ----------------------------------------.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_162269

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           366     2e-103
IGHD2-21*02                                                                                           18.0    0.65  
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	GCGACTG	GGTGGGGACTACTAT	GGTCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGCGACTGGGTGGGGACTACTATGGTCCATTTGAGTTC	VRRLGGDYYGPFEF	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	288	261	27	0	90.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  E  I  S  C  K  A  Y  G  Y  A  F  N  D  Y
                    Query_580    1    GCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCCGGGGAGTCTCTGGAGATCTCCTGTAAGGCTTATGGATACGCCTTTAACGACTA  90
V  90.6% (261/288)  IGHV5-51*01  6    ........................G........................A...............G..C.......AG.....C.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  E  K  G  L  D  W  M  G  V  I  Y  P  D  D  L  D  T  T  Y  S  P
                    Query_580    91   CTGGATCGGCTGGGTGCGCCAGAAGCCCGAGAAAGGCCTGGATTGGATGGGGGTCATCTATCCTGATGACCTTGATACGACATACAGTCC  180
V  90.6% (261/288)  IGHV5-51*01  96   .......................T.....G............G.........A............G....TC......C.G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  N  T  I  Y  L  R  W  S  S  L  K  A  S  D  T  A
                    Query_580    181  GTCCTTCCAAGGCCAGGTCACAATCTCAGTCGACAAGTCCATCAACACCATCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  90.6% (261/288)  IGHV5-51*01  186  .....................C.......C..............G....GC........A..............................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  V  R  R  L  G  G  D  Y  Y  G  P  F  E  F  W  G  Q  G  T  Q  V  T  A  S  S  
                    Query_580    271  CATGTATTATTGTGTGAGGCGACTGGGTGGGGACTACTATGGTCCATTTGAGTTCTGGGGCCAGGGAACCCAGGTCACCGCCTCCTCAG  359
V  90.6% (261/288)  IGHV5-51*01  276  .........C....C...-----------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                          
D  86.7% (13/15)    IGHD2-21*02  11   -------------------------.....T....G....-------------------------------------------------  25
J  90.7% (39/43)    IGHJ4*02     6    ----------------------------------------------.....C.A.................T........T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_136

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           299     2e-83
IGHD2-15*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GTCGGGAAGAAC	AGTGGTG	TCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTCGGGAAGAACAGTGGTGTCTTTTGACTTA	AKSGRTVVSFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	219	28	0	88.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  T  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_581    1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCAACTTTAGCACGTATGCCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  88.7% (219/247)  IGHV3-23*01  47   ......................A.............C........GC..........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  N  S  T  K  Y  A  D  S  V  R  G  R  I  T  I  S  R  D  N  S  
                    Query_581    91   AGTGGGTCTCAGCCATCAGTGGCAGTGGTAATAGCACAAAATATGCAGACTCCGTTAGGGGCCGGATCACCATCTCCAGAGACAATTCCA  180
V  88.7% (219/247)  IGHV3-23*01  137  .............T..T.....T......GG.......T.C..C...........G.A.......T........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  R  M  I  Y  L  Q  M  N  S  M  R  A  E  D  T  A  V  Y  L  C  A  K  S  G  R  T  V  V  S  
                    Query_581    181  AGAGAATGATATATCTTCAAATGAACAGTATGAGAGCCGAGGACACGGCCGTATATCTTTGTGCGAAGTCGGGAAGAACAGTGGTGTCTT  270
V  88.7% (219/247)  IGHV3-23*01  227  ...AC.C.C.G.....G...........CC..........................TAC........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-15*01  11   -------------------------------------------------------------------------------.......----  17
J  90.7% (39/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                  
                                      F  D  L  W  G  Q  G  I  Q  V  T  V  S  S  
                    Query_581    271  TTGACTTATGGGGCCAGGGAATCCAGGTCACCGTCTCCTCAG  312
J  90.7% (39/43)    IGHJ4*02     7    ......AC.............C..T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_137

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD3-16*01                                                                                           10.3    117  
IGHJ6*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGG	GGTAAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGGTAATTACTACTACGCTTTGGACGTC	ARGGGNYYYALDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_582    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATAACTAATTATTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   ...............................G......C.G..G...C........C........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  F  Y  S  G  I  T  S  Y  T  P  S  L  Q  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_582    91   TGGATTGGCTATATGTTTTACAGTGGGATCACCAGCTACACCCCCTCCCTCCAGAGTCGAGTCACCATGTCAGTCGACACGTCCAAGAAG  180
V  91.4% (223/244)  IGHV4-59*01  139  ........G.....C.A...........G.....A.....A..........A................A.....A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  I  S  L  E  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  N  Y  Y  Y  A  L 
                    Query_582    181  CAGATCTCCCTGGAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGGGGGGGGTAATTACTACTACGCTTTG  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T........A......G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   ----------------------------------------------------------------.....---------------------  22
J  96.3% (52/54)    IGHJ6*02     9    ---------------------------------------------------------------------------..........G.A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_582    271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  96.3% (52/54)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_138

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           336     1e-94
IGHD4-4*01                                                                                            18.0    0.58 
IGHJ5*01                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-4*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGAGGGCA	TGACTACAG	AAAAGGGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGAGGGCATGACTACAGAAAAGGGGACTGGTTCGACTCC	ARRGHDYRKGDWFDS	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  G  W  I  R  P  H  P  G  K  G 
                    Query_583    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGGGCTGGATCCGCCCGCACCCAGGGAAGGGC  90
V  93.2% (232/249)  IGHV4-31*03  49   ............................................................A............A................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  M  S  R  V  T  L  S  V  D  T  S 
                    Query_583    91   CTGGAGTGGATTGGCTTCATCTACTATAGTGGGACCACCTACTACAACCCGTCCCTCATGAGTCGAGTTACTTTATCAGTGGACACGTCT  180
V  93.2% (232/249)  IGHV4-31*03  139  ..............G.A......T..C.......G.......................A............CA.......A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  P  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  H  D  Y  R  K 
                    Query_583    181  AAGAACCCGTTCTCCCTGAGGCTGACCTCCGTGACTGCCGCGGACACGGCCGTTTATTATTGTGCGAGAAGAGGGCATGACTACAGAAAA  270
V  93.2% (232/249)  IGHV4-31*03  229  .......A...........A.....G...T.......................G.....C.........---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD4-4*01   1    -----------------------------------------------------------------------------.........----  9

                                      ----------------->                             
                                       G  D  W  F  D  S  W  G  Q  G  T  L  V  T  V  S
                    Query_583    271  GGGGACTGGTTCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTC  317
J  97.7% (42/43)    IGHJ5*01     4    ----......................A....................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_162265

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	237	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	16	8	0	66.7
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	17	7	0	70.8
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	233	213	20	0	91.4


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  D  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 
                    Query_584    12   TGTGCAGCCTCTGGATTCACTTTCAGTGACGCCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATT  101
V  91.4% (213/233)  IGHV3-21*01  64   ....................C......AG.TATA.C......................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_584    102  AGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAATTCACTGTATCTG  191
V  91.4% (213/233)  IGHV3-21*01  154  ...A.T...A.TAG.....T..A......................................................C............  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------------------CDR3-IMGT----------
                                       Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  W  V  A  G  T  G 
                    Query_584    192  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGA  281
V  91.4% (213/233)  IGHV3-21*01  244  .................................G.G.....C...........-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (11/11)   IGHD6-19*01  11   ---------------------------------------------------------------------------...........----  21

                                      -------------->                                  
                                       H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_584    282  CACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  330
J  97.7% (42/43)    IGHJ4*02     6    ------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_162266

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           319     2e-89
IGHD2-21*01                                                                                           10.3    124  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTC	GTGAT	CGGTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCGTGATCGGTGACTACTTTGACCAA	ARHVVIGDYFDQ	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	104	10	0	91.2
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  D  A  S  I  S  R  S  R  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_585    4    CCCTGAGACTCTCCTGTACTGTCTCTGATGCCTCCATCAGCAGAAGTAGATACTATTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  90.8% (227/250)  IGHV4-39*01  50   .....TCC...A....C..........G..G............T.....T.....C..................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  H  I  G  S  T  F  Y  K  Q  S  L  K  T  R  V  T  I  S  I  D  S  S  
                    Query_585    94   TGGAGTGGATTGGGAGTATTTATCATATTGGGAGCACCTTCTACAAACAGTCCCTCAAGACTCGAGTCACCATATCCATAGACTCATCCA  183
V  90.8% (227/250)  IGHV4-39*01  140  ...................C...T...G...........A......C.C...........G................G.....A.G....  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  H  V  V  I  G  D  Y  
                    Query_585    184  AGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTATATATTACTGTGCGAGACATGTCGTGATCGGTGACTACT  273
V  90.8% (227/250)  IGHV4-39*01  230  ..................A...............................G.G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-21*01  15   --------------------------------------------------------------------------.....-----------  19
J  95.8% (46/48)    IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_585    274  TTGACCAATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  95.8% (46/48)    IGHJ4*02     7    .....T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_162267

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            304     1e-84
IGHD1-7*01                                                                                            16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGCGA	CCGA	GGAACTAC	CAGGATGTTCGAGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGACCGAGGAACTACCAGGATGTTCGAGAATGCTCTTGATATC	AGDRGTTRMFENALDI	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	47	4	0	92.2
CDR2-IMGT	108	128	21	21	0	0	100
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                     <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                        S  L  R  L  S  C  G  V  S  G  G  A  I  S  S  S  H  W  W  N  W  V  R  Q  A  P  G  K  G  
                    Query_586   1    GGTCCCTGAGACTCTCCTGTGGTGTCTCTGGCGGCGCCATCAGCAGCAGTCACTGGTGGAATTGGGTCCGCCAGGCCCCCGGGAAGGGGC  90
V  88.8% (222/250)  IGHV4-4*02  47   ..A.....TCC...A....C.C.........T...T..........T...A.........G.............C....A..........  136
                                        T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                     ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                     L  E  W  I  G  Q  I  Y  H  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S  
                    Query_586   91   TGGAGTGGATTGGGCAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAGGAGTCGAGTCAGCATCTCAATAGACACGTCCA  180
V  88.8% (222/250)  IGHV4-4*02  137  ..............G..........................................A...........C...A...G......A.....  226
                                     L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                     -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                     K  H  Q  F  A  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  D  R  G  T  T  R  M  
                    Query_586   181  AGCACCAGTTCGCCCTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGCGGGCGACCGAGGAACTACCAGGATGT  270
V  88.8% (222/250)  IGHV4-4*02  227  ..A........T........C...G...........................G.....C......A.A..--------------------  296
                                     K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-7*01  10   --------------------------------------------------------------------------........--------  17

                                     T------------------>                                  
                                     F  E  N  A  L  D  I  W  G  Q  G  T  T  V  I  V  S  S  
                    Query_586   271  TCGAGAATGCTCTTGATATCTGGGGCCAAGGGACAACGGTCATCGTCTCTTCAG  324
J  93.8% (45/48)    IGHJ3*02    3    ------.....T........................T.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_162260

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           316     2e-88
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AATGCCA	TTCGGGG	G	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGAAATGCCATTCGGGGGTGCCTTTGATATA	VKEMPFGGAFDI	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  V  F  D  S  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_587    1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCGTCTTCGATAGCTATTCTATGCATTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.4% (226/250)  IGHV3-64*05  47   ...................................AC....AG.......G.......C...............................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  V  I  S  S  N  G  E  S  T  F  Y  A  D  S  V  T  G  R  F  T  M  S  R  D  N  S  
                    Query_587    91   AATTTGTATCAGTTATTAGTAGTAATGGAGAGAGTACATTTTACGCAGACTCAGTGACGGGCAGATTCACCATGTCCAGAGACAATTCCA  180
V  90.4% (226/250)  IGHV3-64*05  137  ...A...T....C...............G.GT..C....AC................A...............C................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  K  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  E  M  P  F  G  G  A  
                    Query_587    181  AGAACAAACTGTATCTTCAAATGAGCAGTCTGAGACCTGAAGACACCGCTGTGTATTATTGTGTGAAAGAAATGCCATTCGGGGGTGCCT  270
V  90.4% (226/250)  IGHV3-64*05  227  ......CG......G....................G....G.....G...........C...........--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (7/7)     IGHD3-10*01  13   -----------------------------------------------------------------------------.......------  19
J  95.7% (45/47)    IGHJ3*02     4    -------------------------------------------------------------------------------------...T.  8

                                      ------->                                  
                                      F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_587    271  TTGATATATGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  312
J  95.7% (45/47)    IGHJ3*02     9    .......C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_98830

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           290     2e-80
IGHD3-3*01                                                                                            37.2    9e-07
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTACTCGGC	TACGATTTTTGGAGTGGTT	CTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTACTCGGCTACGATTTTTGGAGTGGTTCTCGACTAC	ARGYSATIFGVVLDY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	213	28	0	88.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  F  S  G  D  S  T  S  G  H  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_588    4    CCCTGAGACTCTCCTGCACTTTCTCTGGAGACTCCACCAGTGGTCACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  88.4% (213/241)  IGHV4-59*01  50   .....TCC...A........G.......T.G.....T....A..T.........G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  V  Y  Y  T  G  S  T  T  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  A  S  R  N  
                    Query_588    94   GGATTGGCTATGTCTATTATACTGGGAGCACCACGTACAACCCCTCCCTCGAGAGTCGAGTCACCATGTCAGTGGACGCGTCCAGGAACC  183
V  88.4% (213/241)  IGHV4-59*01  140  .......G...A.......C.G...........AC...............A................A.....A...A......A.....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  Y  S  A  T  I  F  G  V  
                    Query_588    184  AGTTCTCCCTGAAGTTAAAGTCTGTGACCGCTGCGGACACGGCCGTTTATTATTGTGCGAGGGGCTACTCGGCTACGATTTTTGGAGTGG  273
V  88.4% (213/241)  IGHV4-59*01  230  ..............C.G.GC..........................G.....C........-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (19/19)   IGHD3-3*01   5    -------------------------------------------------------------------------.................  21

                                      ---------->                                  
                                      V  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_588    274  TTCTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (19/19)   IGHD3-3*01   22   ..-------------------------------------------  23
J  100.0% (40/40)   IGHJ4*02     9    -----........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_162262

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           367     6e-104
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTTGTGG	TACTCTGGTTCGGGGAGT	AAAACCCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTTGTGGTACTCTGGTTCGGGGAGTAAAACCCATTTTGACTAC	ARGLWYSGSGSKTHFDY	246	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	113	1	0	99.1
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G  
                    Query_589    4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  97.2% (242/249)  IGHV4-31*02  50   .....TCC...A................................................G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_589    94   TGGAGTGGATTGGGTACATTTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  97.2% (242/249)  IGHV4-31*02  140  ...................C......................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  W  Y  S  G  S  
                    Query_589    184  AGAACCAGTTCTCCCTGAAGCTGCGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGTTTGTGGTACTCTGGTTCGG  273
V  97.2% (242/249)  IGHV4-31*02  230  .......................A.............................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD3-10*01  5    -----------------------------------------------------------------------------....A........  17

                                      GT-------------------->                                  
                                      G  S  K  T  H  F  D  Y  W  G  Q  G  T  L  V  T  V  A  S  
                    Query_589    274  GGAGTAAAACCCATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCGCCTCAG  330
D  94.4% (17/18)    IGHD3-10*01  18   .....----------------------------------------------------  22
J  97.7% (42/43)    IGHJ4*02     6    --------------....................................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_162263

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD2-21*01                                                                                           12.2    33   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTTCTTTGGCGATTTCGA	CTATTC	GGGCCCCCTATCCACCCCACA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTCTTTGGCGATTTCGACTATTCGGGCCCCCTATCCACCCCACAAC	ARLSLAISTIRAPYPPHN	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  A  S  I  S  G  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_590    1    ACCCTGTCCCTCACCTGCTCTGTTTCTGGTGCCTCCATCAGTGGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  94.4% (236/250)  IGHV4-39*01  49   ..................A....C.......G.........CA..............................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  G  R  V  A  I  S  V  D  T  S 
                    Query_590    91   CTGGAGTGGATAGGGACTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGGGTCGAGTCGCCATATCCGTAGACACGTCC  180
V  94.4% (236/250)  IGHV4-39*01  139  ...........T....G...........................................A........A....................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  D  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  S  L  A  I  S  T 
                    Query_590    181  AAGGACCAGTTCTCCCTGAAACTGAACTCTGTGACCGCCGCAGACACGGCTCTGTATTACTGTGCGAGACTTTCTTTGGCGATTTCGACT  270
V  94.4% (236/250)  IGHV4-39*01  229  ...A................G....G.........................G..................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-21*01  22   ----------------------------------------------------------------------------------------..  23

                                      -IMGT--------------------->                                  
                                       I  R  A  P  Y  P  P  H  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_590    271  ATTCGGGCCCCCTATCCACCCCACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  100.0% (6/6)     IGHD2-21*01  24   ....---------------------------------------------------------  27
J  100.0% (36/36)   IGHJ4*02     13   -------------------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_50627

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           333     1e-93
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAGTACCAA	ATAGCAGT	CCAATACCCCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCCAGTACCAAATAGCAGTCCAATACCCCCCCTTTGACTTC	VRGQYQIAVQYPPFDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  L  T  D  Y  A  M  Y  W  V  R  Q  A  P  G  K  G  P  
                    Query_591    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTGACTGACTATGCAATGTACTGGGTCCGCCAGGCTCCAGGCAAGGGGCCGG  90
V  92.8% (231/249)  IGHV3-30*03  47   ....................................C...C.G.AG.....GC...C..............................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  H  G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  
                    Query_591    91   AGTGGGTGGCCCTTATATCATATCATGGAAGTAATAAATTCTATGCAGACTCCGTGAAGGGCCGATTTACCATCTCCAGAGACATTTCCA  180
V  92.8% (231/249)  IGHV3-30*03  137  ..........AG...........G...............A...........................C................A.....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  G  Q  Y  Q  I  A  V  
                    Query_591    181  AGAGCACGCTATATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGTGAGAGGCCAGTACCAAATAGCAGTCC  270
V  92.8% (231/249)  IGHV3-30*03  227  ...A......G....................................................C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  5    --------------------------------------------------------------------------------........--  12

                                      T------------------>                                  
                                      Q  Y  P  P  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_591    271  AATACCCCCCCTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.7% (43/44)    IGHJ4*02     5    ----------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_98831

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            358     3e-101
IGHD3-10*01                                                                                           10.3    116   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GA	TCGGG	ATGGCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGATCGGGATGGCTCCCTGACTAC	VGGSGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  N  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_592    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGTAACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-7*01   47   ....................................C........G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  K  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_592    91   AGTGGGTGGCCAACATAAAGAAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (239/249)  IGHV3-7*01   137  ....................C.................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  V  G  G  S  G  W  L  P  D  
                    Query_592    181  AGAACTCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGTGGGAGGATCGGGATGGCTCCCTGACT  270
V  96.0% (239/249)  IGHV3-7*01   227  ...................A...A............C..........................C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   -----------------------------------------------------------------------.....--------------  18
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_592    271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_12793

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           419     2e-119
IGHD3-16*01                                                                                           12.2    36    
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGA	AATTGGTAACACCTAATTGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTC	ARRGKLVTPNWDYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	278	10	0	96.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_593    2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAC  91
V  96.5% (278/288)  IGHV1-18*04  7    ...................C.................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  C  Y  N  G  N  T  K  Y  A  L 
                    Query_593    92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGTTGTTACAATGGTAACACAAAGTATGCACTG  181
V  96.5% (278/288)  IGHV1-18*04  97   ...........................................................CGC..................C.......A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  H  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_593    182  AAGCACCAGGGCAGAGTCACCATGACCACAGACACATCGACGAGCACAGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.5% (278/288)  IGHV1-18*04  187  ....T.................................C..............C....................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------CDR3-IMGT-------------------->                           
                                       V  Y  Y  C  A  R  R  G  K  L  V  T  P  N  W  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_593    272  GTGTATTACTGTGCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  361
V  96.5% (278/288)  IGHV1-18*04  277  ..................------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD3-16*01  18   -------------------......-----------------------------------------------------------------  23
J  100.0% (50/50)   IGHJ6*02     13   ----------------------------------------------............................................  56

                                            
                                       S  S 
                    Query_593    362  TCCTCA  367
J  100.0% (50/50)   IGHJ6*02     57   ......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_50626

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           403     1e-114
IGHD4-17*01                                                                                           18.0    0.69  
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAG	CTACGGTGA	GTCCGAGTAGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTATGGACGTC	ARDLATVSPSSFYYGMDV	292	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	71	4	0	94.7
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	277	19	0	93.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  S 
                    Query_594    4    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCCTCTGGTTACACCTTTAGT  93
V  93.6% (277/296)  IGHV1-18*01  1    .....T.....G.........................................................G.T................CC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y 
                    Query_594    94   AGTTATGGTATCACCTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTAT  183
V  93.6% (277/296)  IGHV1-18*01  91   ..C..........G.........A..............A................................C......A...........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_594    184  GCACAGATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGTTGAGGAGCCTGAGATCTGACGAC  273
V  93.6% (277/296)  IGHV1-18*01  181  .......A.C...A..G.................C....................C..........C.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  S  F  Y  Y  G  M  D  V  W  G  Q  G  T  T 
                    Query_594    274  ACGGCCGTGTATTACTGTGCGAGAGATTTAGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACG  363
V  93.6% (277/296)  IGHV1-18*01  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------------.........--------------------------------------------------  12
J  100.0% (52/52)   IGHJ6*02     11   -----------------------------------------------------.....................................  47

                                                     
                                       V  T  V  S  S 
                    Query_594    364  GTCACCGTCTCCTCA  378
J  100.0% (52/52)   IGHJ6*02     48   ...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_98836

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           266     2e-73
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTCTTG	ATTACTAT	CCTTCG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTCTTGATTACTATCCTTCGAACTGGTTCGACCGC	ARDSLDYYPSNWFDR	250	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	135	33	17	7	9	51.5
FR3-IMGT	136	249	114	103	11	0	90.4
CDR3-IMGT (germline)	250	257	8	7	1	0	87.5
Total	N/A	N/A	256	215	32	9	84


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  S  I  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_595    2    CCCTGTCCCTCACCTGCGCAGCCTCTGGATTCACCTTCAGCATCTATGGCATGAACTGGGTCCGCCAGGCTCCTGGGAAGGGACTGGAGT  91
V  84.0% (215/256)  IGHV3-23*01  50   .....AGA...T....T....................T....G.....C.....G..................A........G.......  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-----------CDR2-IMGT-----------><---------------------------------------------
                                      W  V  S  S  M  S  G  D  D  D  D  E  D  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  
                    Query_595    92   GGGTCTCATCCATGAGTGGTGATGATGATGATGAAGATAATACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACA  181
V  84.0% (215/256)  IGHV3-23*01  140  ........G.T..T......AG..G..G.---------.GC.............................G...................  220
                                      W  V  S  A  I  S  G  S  G  G           S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------------CDR3
                                      N  S  N  N  I  L  Y  L  Q  M  N  R  L  R  A  D  D  T  A  V  Y  F  R  A  R  D  S  L  D  Y  
                    Query_595    182  ATTCCAATAATATCCTCTATCTACAAATGAACCGCCTGAGAGCCGACGACACGGCCGTATATTTCCGTGCGAGAGATTCTCTTGATTACT  271
V  84.0% (215/256)  IGHV3-23*01  221  .......G..C.CG..G.....G.........A.............G................A.T......A...--------------  296
                                      N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                 
D  100.0% (8/8)     IGHD3-10*01  3    ------------------------------------------------------------------------------------......  8

                                      -IMGT----------------->                                  
                                      Y  P  S  N  W  F  D  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_595    272  ATCCTTCGAACTGGTTCGACCGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  100.0% (8/8)     IGHD3-10*01  9    ..-------------------------------------------------------  10
J  98.0% (48/49)    IGHJ5*02     3    --------.............C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_12792

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           327     9e-92
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCTACGAGGCGAGTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATATCTACGAGGCGAGTCATCAATATAGTGGCTACATGATTAATGACTAC	GKDIYEASHQYSGYMINDY	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	22	4	0	84.6
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	126	24	22	2	0	91.7
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	248	8	7	1	0	87.5
Total	N/A	N/A	247	228	19	0	92.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  D  
                    Query_596    2    CCCTGTCCCTCACCTGTGCAGCCTCTGGATTCACCTTTAGCAGATATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGGATT  91
V  92.3% (228/247)  IGHV3-23*01  50   .....AGA...T...............................C......................................G.....G.  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  G  I  S  E  S  G  G  S  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  
                    Query_596    92   GGGTCTCAGGTATTAGTGAAAGTGGTGGTAGCACAAACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCAAGA  181
V  92.3% (228/247)  IGHV3-23*01  140  .........C........GT...............T...............................................T......  229
                                      W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------CDR3-IM
                                      N  I  L  Y  L  Q  M  I  S  L  R  A  E  D  T  A  V  Y  Y  C  G  K  D  I  Y  E  A  S  H  Q  
                    Query_596    182  ATATCCTGTATCTACAAATGATCAGCCTCAGAGCCGAGGACACGGCCGTATATTACTGTGGGAAAGATATCTACGAGGCGAGTCATCAAT  271
V  92.3% (228/247)  IGHV3-23*01  230  .C.CG........G.......A......G...............................C......-----------------------  296
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                          
D  100.0% (13/13)   IGHD5-12*01  5    ----------------------------------------------------------------------------------------..  6

                                      GT----------------------->                                  
                                      Y  S  G  Y  M  I  N  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_596    272  ATAGTGGCTACATGATTAATGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  331
D  100.0% (13/13)   IGHD5-12*01  7    ...........-------------------------------------------------  17
J  97.6% (40/41)    IGHJ4*02     8    -------------------.............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_50625

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD3-16*02                                                                                           18.0    0.68  
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATGATAGTGGC	AGTTATCTTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGCAGTTATCTTTATTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_597    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTACCAACTA  90
V  95.5% (278/291)  IGHV5-51*01  6    .................................................................G...........G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  D  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_597    91   CTGGATCGACTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ........G...................................................................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  I  T  I  S  A  D  N  S  I  G  T  A  Y  L  Q  L  H  S  L  K  A  S  D  T  A
                    Query_597    181  GTCCTTCGAAGGCCAAATCACCATCTCAGCCGACAACTCCATCGGCACCGCCTACCTGCAGTTGCACAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  .......C.......GG...................G......A..................G.AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  A  T  V
                    Query_597    271  CATGTATTACTGTGCGAGACATGGGGATGATAGTGGCAGTTATCTTTATTACTTCTACGGTATGGACGTCTGGGGCCAAGGGGCCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD3-16*02  23   -------------------------------------.......G....-----------------------------------------  34
J  96.3% (52/54)    IGHJ6*02     9    -------------------------------------------------....A............................A.......  49

                                                   
                                        T  V  S  S 
                    Query_597    361  CACCGTCTCCTCA  373
J  96.3% (52/54)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_98837

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD3-10*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	225	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_598    4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAGT  93
V  93.4% (225/241)  IGHV4-59*01  50   .....TCC...A....C........................AG..............................A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_598    94   GGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  93.4% (225/241)  IGHV4-59*01  140  ...............AT........G.G..............................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W  
                    Query_598    184  AGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGC  273
V  93.4% (225/241)  IGHV4-59*01  230  ............A......C.........G................G..............-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  93.3% (14/15)    IGHD3-10*01  11   -----------------------------------------------------------------..........G....----------  25
J  97.9% (46/47)    IGHJ5*02     5    -------------------------------------------------------------------------------------....T  9

                                      ------->                                  
                                      L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_598    274  TCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.9% (46/47)    IGHJ5*02     10   ..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_68058

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         349     2e-98
IGHD5-12*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGAGGAT	TGGCTACGA	GACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGACCCCCTTTGACCTC	ARAGRIGYETPFDL	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_599      1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTACTCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  95.1% (235/247)  IGHV4-38-2*02  49   ................................................T.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K 
                    Query_599      91   GAGTGGATTGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAG  180
V  95.1% (235/247)  IGHV4-38-2*02  139  ......................A.........C.........A..............A........................C.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  Q  F  S  L  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  T 
                    Query_599      181  AACCAGTTCTCGTTGAACCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGAGCGGGGAGGATTGGCTACGAGACC  270
V  95.1% (235/247)  IGHV4-38-2*02  229  ...........CC....G....G...........C...............G................-----------------------  295
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD5-12*01    11   -----------------------------------------------------------------------------.........----  19

                                        ----------->                                  
                                         P  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_599      271  CCCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.5% (42/44)    IGHJ4*02       5    --.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_214408

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-66*04                                                                                           280     1e-77
IGHD3-10*02                                                                                           10.3    116  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-66*04	IGHD3-10*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	GGAGATGGCCTCA	ATGTT	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAGGAGATGGCCTCAATGTTCTTTGACTAC	VRQEMASMFFDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	96	18	0	84.2
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	247	213	34	0	86.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  L  K  V  S  I  N  D  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_600    1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTAAAAGTCAGTATAAATGACATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  86.2% (213/247)  IGHV3-66*04  47   ....................G.............C.CC.......GC..CT.......C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  A  L  I  Y  S  D  G  R  T  H  Y  A  D  S  V  K  G  R  I  T  L  S  R  D  T  S  K  
                    Query_600    91   AGTGGGTCGCACTTATCTATAGCGATGGCAGAACACACTACGCAGACTCCGTCAAGGGCCGAATCACCCTCTCCAGAGACACGTCCAAGA  180
V  86.2% (213/247)  IGHV3-66*04  137  ........T..G....T.......G...T..C...T................G......A..T.....A............AT.......  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  L  Y  Y  C  V  R  Q  E  M  A  S  M  F  F  
                    Query_600    181  ACACCTTATATCTTCAAATGAACAGCCTGCGAGTCGACGACACTGCCCTATATTATTGTGTGAGACAGGAGATGGCCTCAATGTTCTTTG  270
V  86.2% (213/247)  IGHV3-66*04  227  ....GC.G.....................A...C...G.....G..TG.G.....C....C......-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (5/5)     IGHD3-10*02  9    --------------------------------------------------------------------------------.....-----  13
J  100.0% (44/44)   IGHJ4*02     5    -------------------------------------------------------------------------------------.....  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_600    271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (44/44)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_214409

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           321     7e-90
IGHD3-22*01                                                                                           37.2    9e-07
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCTT	CTATGATAGCAGTGGTTATTAC	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCTTCTATGATAGCAGTGGTTATTACCACTTTGACTAT	VVFYDSSGYYHFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	240	1	1	0	0	100
Total	N/A	N/A	237	221	16	0	93.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  A  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_601    4    CCCTGAGACTCTCCTGCACTGTGTCTGGTGCCGCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.2% (221/237)  IGHV4-59*01  50   .....TCC...A..........C.......G.T.........................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_601    94   GGATTGGTTATATCTATCACAGTGGGACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAACC  183
V  93.2% (221/237)  IGHV4-59*01  140  .......G.........T.........G...............C.............................A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  F  Y  D  S  S  G  Y  Y  H  
                    Query_601    184  AGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGTGGTCTTCTATGATAGCAGTGGTTATTACCACT  273
V  93.2% (221/237)  IGHV4-59*01  230  ..................GC..........................G..T.......---------------------------------  286
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                                   
D  95.5% (21/22)    IGHD3-22*01  7    ----------------------------------------------------------------.........T............----  28
J  95.6% (43/45)    IGHJ4*02     4    ---------------------------------------------------------------------------------------...  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_601    274  TTGACTATTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  315
J  95.6% (43/45)    IGHJ4*02     7    .......C.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_214404

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     3e-93
IGHD3-10*01                                                                                           43.0    2e-08
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	GATCGTGG	CTATGGTTCGGGGAGTTATTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATCGTGGCTATGGTTCGGGGAGTTATTATTTTGACAAC	ARDRGYGSGSYYFDN	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	242	227	15	0	93.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  M  S  R  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_602    4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATGAGTAGGTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.8% (227/242)  IGHV4-59*08  50   .....TCC...A....C....................C.....T..............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_602    94   GGATTGGGTATATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  93.8% (227/242)  IGHV4-59*08  140  ...........................G....A..........C..............................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  A  Y  H  C  A  R  D  R  G  Y  G  S  G  S  Y  
                    Query_602    184  AGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGCCTATCACTGTGCCAGAGATCGTGGCTATGGTTCGGGGAGTTATT  273
V  93.8% (227/242)  IGHV4-59*08  230  ............................C................TG...T.......G...----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (22/22)   IGHD3-10*01  7    ----------------------------------------------------------------------....................  26

                                      ---------->                                  
                                      Y  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_602    274  ATTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  318
D  100.0% (22/22)   IGHD3-10*01  27   ..-------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    --......T...............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_214405

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           364     5e-103
IGHD2-15*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGC	ATTGTAATGGT	AACAGGTGTTGGGG	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGCATTGTAATGGTAACAGGTGTTGGGGCGTC	ARDRHCNGNRCWGV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_603    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAACAACTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (240/247)  IGHV3-53*01  47   .............................................G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  I  Y  S  G  G  T  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  
                    Query_603    91   AGTGGGTCTCACTTATTTATAGCGGTGGTACCACACACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGA  180
V  97.2% (240/247)  IGHV3-53*01  137  ...........G..................G....T...................................................A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  R  H  C  N  G  N  R  
                    Query_603    181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGATAGGCATTGTAATGGTAACAGGT  270
V  97.2% (240/247)  IGHV3-53*01  227  .................................C.................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  90.9% (10/11)    IGHD2-15*01  6    ------------------------------------------------------------------------......G....-------  16

                                      ---------->                                 
                                      C  W  G  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_603    271  GTTGGGGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (37/37)   IGHJ6*02     26   -------.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_214406

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           302     3e-84
IGHD2-8*02                                                                                            21.8    0.042
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAGCTGGGA	ATTGTACTGGT	AATAGGTGCCAGTCCTATGGCTTCAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAGCTGGGAATTGTACTGGTAATAGGTGCCAGTCCTATGGCTTCAGTGACTCC	ARAAGNCTGNRCQSYGFSDS	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	221	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  R  H  F  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_604    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGACACTTTGCCATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  88.8% (221/249)  IGHV3-23*01  47   ....................................C......CAG..A........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  G  S  S  R  Q  S  P  F  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_604    91   AGTGGGTCTCGGCTATTGGTAGTAGTCGTCAGAGTCCATTTTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  88.8% (221/249)  IGHV3-23*01  137  ..........A......A..G.....G..GGT..CA...AC..............................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  P  Q  M  N  S  L  R  A  E  D  T  A  M  Y  Y  C  A  R  A  A  G  N  C  T  G  
                    Query_604    181  AGAACACACTATATCCGCAGATGAATAGCCTGCGAGCCGAGGACACGGCCATGTATTACTGTGCGAGAGCAGCTGGGAATTGTACTGGTA  270
V  88.8% (221/249)  IGHV3-23*01  227  .......G..G....T...A.....C......A.................G.A.............A..---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD2-8*02   6    ------------------------------------------------------------------------------...........-  16

                                      R3-IMGT------------------------>                                  
                                      N  R  C  Q  S  Y  G  F  S  D  S  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_604    271  ATAGGTGCCAGTCCTATGGCTTCAGTGACTCCTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTCAG  336
J  95.1% (39/41)    IGHJ4*02     8    -------------------------.....A..............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_214407

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*03                                                                                           305     3e-85
IGHD2-15*01                                                                                           10.3    128  
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATAGA	TC	AGGAT	GTGAACATACCCGCTGGCCTCCGGCTCCACTTT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATAGATCAGGATGTGAACATACCCGCTGGCCTCCGGCTCCACTTTTACGGTCTGGACGTC	AIDQDVNIPAGLRLHFYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	223	28	0	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  V  S  N  D  D  Y  F  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_605    1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCGTCAGTAATGATGATTACTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  88.8% (223/251)  IGHV4-61*03  49   ..................A....C.................C.G..G.AG.....A..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  K  S  G  I  T  K  S  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_605    91   CTGGAATGGATTGGCTACATCTCCAAAAGTGGGATCACCAAGTCCAACCCCTCCCTCAAGAGTCGAGTCTCCATCTCAGTTGACACGTCC  180
V  88.8% (223/251)  IGHV4-61*03  139  .....G........G..T....ATT.C.......G......C.A.........................A....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       T  N  R  F  S  L  K  L  T  S  V  T  A  V  D  T  A  V  Y  Y  C  A  I  D  Q  D  V  N  I  P 
                    Query_605    181  ACGAACCGCTTCTCCCTGAAACTGACCTCTGTAACCGCTGTGGACACGGCCGTGTATTACTGTGCGATAGATCAGGATGTGAACATACCC  270
V  88.8% (223/251)  IGHV4-61*03  229  .A.....A............G....G......G.......C..........................G...-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD2-15*01  1    -------------------------------------------------------------------------.....------------  5

                                      CDR3-IMGT-------------------------->                                
                                       A  G  L  R  L  H  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_605    271  GCTGGCCTCCGGCTCCACTTTTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  338
J  97.9% (46/47)    IGHJ6*02     15   ---------------------......A........................................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_214400

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           327     9e-92
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGCG	GGCTGG	G	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCTGGGAACTGGTTCGACCCC	ARGRRAGNWFDP	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_606    4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAGTGGGGCTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  92.0% (229/249)  IGHV4-31*03  50   .....TCC...A............................C.....T.G............C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  G  E  N  T  Q  Y  N  P  S  L  K  S  R  L  T  I  S  G  D  T  S  
                    Query_606    94   TGGAGTGGATTGGATACATCTATTACGGTGAGAACACCCAGTACAACCCGTCCCTTAAGAGTCGACTTACCATATCAGGAGACACGTCTA  183
V  92.0% (229/249)  IGHV4-31*03  140  .............G............A...G..G....T.C..............C.........G............T...........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      T  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  W  
                    Query_606    184  CGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCTGGGAACTGGT  273
V  92.0% (229/249)  IGHV4-31*03  230  A.................A.................................G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD6-19*01  13   ----------------------------------------------------------------------------......--------  18
J  98.0% (48/49)    IGHJ5*02     3    -----------------------------------------------------------------------------------.......  9

                                      ------->                                  
                                      F  D  P  W  G  Q  G  T  L  V  T  V  T  S  
                    Query_606    274  TCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCACCTCAG  315
J  98.0% (48/49)    IGHJ5*02     10   ...................................T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_50622

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           285     4e-79
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ1*01                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	TTCCTCGGCGA	GTATTGCACTGGCTGG	AACATTTGGGGT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTCCTCGGCGAGTATTGCACTGGCTGGAACATTTGGGGTC	ARGSSASIALAGTFGV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	99	15	0	86.8
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	213	31	0	87.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  G  V  R  G  G  S  F  S  G  S  Y  W  A  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_607    4    CCCTGAGACTCTCCTGCGGTGTCCGTGGTGGGTCCTTCAGTGGCTCTTACTGGGCCTGGATCCGCCAGCCCCCAGGCAAGGGGCTGGAGT  93
V  87.3% (213/244)  IGHV4-34*01  50   .....TCC...A......C....TA..................T.AC......AG.....................G.............  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  S  P  Q  Y  N  P  S  L  K  S  R  V  S  I  A  V  D  T  S  N  N  
                    Query_607    94   GGATTGGCGAAATCAATCATAGTGGAAGTCCCCAATACAACCCGTCCCTCAAGAGTCGAGTCAGTATCGCAGTGGACACGTCGAACAACC  183
V  87.3% (213/244)  IGHV4-34*01  140  .......G....................CA..A.C............................CC..AT....A........C..G....  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      H  L  S  L  R  M  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  S  A  S  I  A  L  A  
                    Query_607    184  ACCTCTCCCTGAGGATGACCTCTGTTACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGTTCCTCGGCGAGTATTGCACTGGCTG  273
V  87.3% (213/244)  IGHV4-34*01  230  .GT.........A.C...G......G......................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  87.5% (14/16)    IGHD6-19*01  3    ---------------------------------------------------------------------------....A...G......  17

                                      ------------->                                  
                                      G  T  F  G  V  W  G  Q  G  P  L  V  T  V  S  A  
                    Query_607    274  GAACATTTGGGGTCTGGGGCCAGGGCCCCCTAGTCACCGTCTCCGCAG  321
D  87.5% (14/16)    IGHD6-19*01  18   .-----------------------------------------------  18
J  91.4% (32/35)    IGHJ1*01     18   -------------.............A....G............T...  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_58137

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD2-15*01                                                                                           12.2    30   
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGC	CTACTC	TTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTTCTACGTTCTGGACGTC	AREAYSFYVLDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_608    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_608    91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  F  Y  V  L  D 
                    Query_608    181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTTCTACGTTCTGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-15*01  25   --------------------------------------------------------------------......----------------  30
J  95.9% (47/49)    IGHJ6*02     14   -----------------------------------------------------------------------------.....G.A.....  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_608    271  GTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  306
J  95.9% (47/49)    IGHJ6*02     27   ....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_142781

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           346     2e-97
IGHD5-12*01                                                                                           12.2    31   
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGGG	GTGCCTACG	TCCGGGCGTTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGGGGTGCCTACGTCCGGGCGTTTTTTGACTAC	ARRGAYVRAFFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  S  F  S  S  Y  E  M  H  W  I  R  Q  A  P  G  K  G  L  
                    Query_609    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTAGATTCAGCTTCAGTAGTTATGAAATGCACTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.7% (234/247)  IGHV3-48*03  47   .............................G......C...................A.....G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  Y  N  G  G  L  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_609    91   AGTGGCTTTCATACATTAGTTATAATGGTGGTCTCATATATTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.7% (234/247)  IGHV3-48*03  137  .....G..............AG..G....A..AC......C.................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  R  G  A  Y  V  R  A  
                    Query_609    181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGAGGGGTGCCTACGTCCGGGCGT  270
V  94.7% (234/247)  IGHV3-48*03  227  ....................................................T..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  88.9% (8/9)      IGHD5-12*01  10   ------------------------------------------------------------------------...G.....---------  18

                                      ---------->                                  
                                      F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_609    271  TTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (43/43)   IGHJ4*02     6    --...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_282779

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     4e-93
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_610    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  S  L  K  P  R  V  T  I  S  L  D  T  S  K  N 
                    Query_610    91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCTCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-59*08  139  ...A....G......T.......T..............................AG............A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G 
                    Query_610    181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGT  270
V  93.4% (228/244)  IGHV4-59*08  229  .............A......C..........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_610    271  TATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  334
J  94.2% (49/52)    IGHJ1*01     1    ------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_282778

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTGA	TATGGTTCGCGGAGTT	CTTGAGAGGGAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTGATATGGTTCGCGGAGTTCTTGAGAGGGAGGACTAC	ARLDMVRGVLEREDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_611    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGCAAGGGTTCTGGGTACAGCTTTTCCACCTA  90
V  97.6% (282/289)  IGHV5-51*03  6    ............................................................T...........A.........A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  S  P
                    Query_611    91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACAGCCC  180
V  97.6% (282/289)  IGHV5-51*03  96   ........G........................................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_611    181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  ........A.................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  L  D  M  V  R  G  V  L  E  R  E  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_611    271  CATGTATTACTGTGCGAGACTTGATATGGTTCGCGGAGTTCTTGAGAGGGAGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  97.6% (282/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  93.8% (15/16)    IGHD3-10*01  8    ------------------------.........G......--------------------------------------------------  23
J  100.0% (40/40)   IGHJ4*02     9    ----------------------------------------------------......................................  46

                                        
                                        
                    Query_611    361  AG  362
J  100.0% (40/40)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_334592

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_612    1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_612    91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_612    181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_612    271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_282774

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD6-19*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGCCCCCCGTACCGCA	TATAGCAGTGCCTG	CCACG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGCCCCCCGTACCGCATATAGCAGTGCCTGCCACGGACTAC	ARWPPVPHIAVPATDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  R  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_613    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTAGGTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.9% (238/243)  IGHV4-59*01  49   ......................................C.....T.............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  M  N 
                    Query_613    91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCATGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  .....................................................................................A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  M  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  W  P  P  V  P  H  I  A  V 
                    Query_613    181  CAGTTCTCCCTGAAGATGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGATGGCCCCCCGTACCGCATATAGCAGTG  270
V  97.9% (238/243)  IGHV4-59*01  229  ...............C.....................................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  4    --------------------------------------------------------------------------------..........  13

                                      -------------->                                  
                                       P  A  T  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_613    271  CCTGCCACGGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  319
D  92.9% (13/14)    IGHD6-19*01  14   G...---------------------------------------------  17
J  97.5% (39/40)    IGHJ4*02     9    ---------............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_282777

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           302     3e-84
IGHD3-10*02                                                                                           14.1    8.3  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	CTATGTT	AAGGGGCTCTGATAG	TTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTATGTTAAGGGGCTCTGATAGTTTTAATACT	ATMLRGSDSFNT	250	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	63	36	27	3	6	75
FR2-IMGT	64	114	51	48	3	0	94.1
CDR2-IMGT	115	135	21	18	3	0	85.7
FR3-IMGT	136	249	114	102	12	0	89.5
CDR3-IMGT (germline)	250	253	4	4	0	0	100
Total	N/A	N/A	253	225	22	6	88.9


Alignments

                                      <--------FR1-IMGT---------><-------------CDR1-IMGT------------><--------------------FR2-IM
                                       T  L  S  L  T  C  N  V  S  G  G  S  I  I  I  S  T  N  G  Y  Y  W  G  W  I  R  Q  P  P  G 
                    Query_614    1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCATCATCATCAGTACAAATGGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGA  90
V  88.9% (225/253)  IGHV4-39*01  49   ...................C....................G..GT....------..................................G  132
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S        S  Y  Y  W  G  W  I  R  Q  P  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  G  L  E  W  I  G  T  I  S  H  S  G  T  T  Y  Y  K  A  S  L  K  S  R  V  T  I  S  V  D 
                    Query_614    91   AAGGGACTGGAGTGGATTGGGACTATCTCTCATAGTGGGACCACCTACTACAAGGCGTCCCTCAAGAGTCGAGTCACCATATCCGTCGAC  180
V  88.9% (225/253)  IGHV4-39*01  133  .....G................G.....A.T.........G............CC...............................A...  222
                                       K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-------------CDR3-IM
                                       T  S  K  N  Q  F  S  L  R  V  T  S  V  T  A  A  D  T  A  M  F  Y  C  A  T  M  L  R  G  S 
                    Query_614    181  ACGTCGAAAAATCAGTTCTCCCTGAGGGTGACCTCTGTGACCGCCGCAGACACGGCTATGTTTTATTGTGCGACTATGTTAAGGGGCTCT  270
V  88.9% (225/253)  IGHV4-39*01  223  .....C..G..C.............A.C...G.........................G...A...C.......-----------------  295
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                   
D  100.0% (7/7)     IGHD3-10*02  7    -------------------------------------------------------------------------.......----------  13

                                      GT------------>                                  
                                       D  S  F  N  T  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_614    271  GATAGTTTTAATACTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  319
J  93.2% (41/44)    IGHJ3*02     7    -----....G...TC..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_282776

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           263     2e-72
IGHD3-16*01                                                                                           12.2    33   
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GATCTCCCATTG	TTATGA	GCGGGGCACGGTTTTCGAGTCGGGCTCCCCTT	GACCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTCCCATTGTTATGAGCGGGGCACGGTTTTCGAGTCGGGCTCCCCTTGACCCC	ARSPIVMSGARFSSRAPLDP	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	94	20	0	82.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	207	39	0	84.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  K  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_615    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACCTTCACCAAACATGCCCTGAGTTGGGTCCGACAGGCTCCAGGGAAGGGACTAC  90
V  84.1% (207/246)  IGHV3-23*01  47   ...............................A........T.G..GCT.....A....C........C.................G..GG  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  T  I  S  G  D  G  R  A  T  S  T  L  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_615    91   AGTGGGTCTCAACTATTAGTGGTGATGGTCGTGCCACGTCCACCTTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  84.1% (207/246)  IGHV3-23*01  137  ...........G...........AG....G..AG...A.A.TA.GC............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      I  N  T  L  F  L  Q  L  T  S  L  R  V  D  D  S  A  L  Y  Y  C  A  R  S  P  I  V  M  S  G  
                    Query_615    181  TCAACACTTTATTTCTGCAACTGACCAGCCTGAGAGTCGACGACTCGGCCCTCTACTATTGTGCGAGATCTCCCATTGTTATGAGCGGGG  270
V  84.1% (207/246)  IGHV3-23*01  227  AG.....GC.G.A.......A...A...........C...G...A.....G.A..T..C.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-16*01  4    ------------------------------------------------------------------------------......------  9

                                      R3-IMGT------------------------>                                  
                                      A  R  F  S  S  R  A  P  L  D  P  W  G  Q  G  T  L  V  T  V  T  S  
                    Query_615    271  CACGGTTTTCGAGTCGGGCTCCCCTTGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCACTTCAG  336
J  95.0% (38/40)    IGHJ5*02     12   --------------------------.................................T.C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_282771

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           329     3e-92
IGHD2-8*01                                                                                            12.2    31   
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TAATGG	CCCGACTGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGGCCCGACTGAACTACGGCATGGACGTC	ARLMARLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  L  T  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_616    1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCCTCACCAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCCGGGAAGGGACTGGAA  90
V  93.0% (227/244)  IGHV4-59*08  49   ..................A............G....A...GT..................A.............A..............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  R  P  N  N  N  P  S  L  R  S  R  V  T  I  S  V  D  A  S  K  N 
                    Query_616    91   TGGATTGAGTATATCTATTACAGAGGGCGTCCCAACAACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACGCGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*08  139  .......G...............T...A.CA.....T...............A.........................A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  A  R  L  N  Y  G  M 
                    Query_616    181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACTAATGGCCCGACTGAACTACGGCATG  270
V  93.0% (227/244)  IGHV4-59*08  229  ...................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-8*01   13   ----------------------------------------------------------------......--------------------  18
J  94.0% (47/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_616    271  GACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCGTCA  309
J  94.0% (47/50)    IGHJ6*02     24   .............A.....................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_282770

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           280     1e-77
IGHD6-13*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGAA	GTCCCGAAATCCCGATCCT	TATACCAGCACCTGGT	TTCCCCGGGGGGCCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAAGTCCCGAAATCCCGATCCTTATACCAGCACCTGGTTTCCCCGGGGGGCCTTCTTTGACGAC	TKSRNPDPYTSTWFPRGAFFDD	236	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	20	22	3	3	0	0	100
CDR1-IMGT	23	46	24	21	3	0	87.5
FR2-IMGT	47	97	51	47	4	0	92.2
CDR2-IMGT	98	121	24	18	6	0	75
FR3-IMGT	122	235	114	107	7	0	93.9
CDR3-IMGT (germline)	236	240	5	4	1	0	80
Total	N/A	N/A	221	200	21	0	90.5


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  I  F  S  S  Y  V  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  T  I  S  G  V 
                    Query_617    20   TCTGGATTCATCTTCAGCAGCTATGTCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCGCGACCATTAGTGGCGTT  109
V  90.5% (200/221)  IGHV3-23*01  73   ..........C...T..........C..............................................T.AG.T........TAG.  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  V  S  S  Y  Y  A  D  S  V  K  G  R  F  P  I  S  R  D  N  S  K  N  T  F  Y  L  Q  M  N 
                    Query_617    110  GGTGTTAGTTCATACTATGCAGACTCCGTGAAGGGCCGGTTCCCCATCTCCAGAGACAATTCCAAGAACACTTTTTATCTGCAAATGAAC  199
V  90.5% (200/221)  IGHV3-23*01  163  ....G...CA.......C........................A............................GC.G...............  252
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><----------------------------CDR3-IMGT----------------
                                       S  L  R  V  E  D  T  A  I  Y  Y  C  T  K  S  R  N  P  D  P  Y  T  S  T  W  F  P  R  G  A 
                    Query_617    200  AGCCTGAGAGTCGAGGACACGGCCATATATTACTGTACGAAGTCCCGAAATCCCGATCCTTATACCAGCACCTGGTTTCCCCGGGGGGCC  289
V  90.5% (200/221)  IGHV3-23*01  253  ..........C.............G...........G....-------------------------------------------------  293
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                    
D  87.5% (14/16)    IGHD6-13*01  4    ------------------------------------------------------------....G.....G.....--------------  19

                                      ----------->                                  
                                       F  F  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_617    290  TTCTTTGACGACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  335
J  95.5% (42/44)    IGHJ4*02     5    --.......T...................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_282773

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           311     4e-87
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	239	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	16	8	0	66.7
FR3-IMGT	125	238	114	107	7	0	93.9
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	233	216	17	0	92.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 
                    Query_618    14   TGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATT  103
V  92.7% (216/233)  IGHV3-21*01  64   ...........................AG.............................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  K  K  S  V  F  L 
                    Query_618    104  AGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCAAGAAGTCAGTGTTTCTG  193
V  92.7% (216/233)  IGHV3-21*01  154  ...AG.AG..G..G.T....A........A.......................................G.......C...C...A....  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------------------CDR3-IMGT-------------
                                       Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  G  Y  P  L  D  G 
                    Query_618    194  CAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGT  283
V  92.7% (216/233)  IGHV3-21*01  244  .......................G...........G.................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (15/15)   IGHD3-22*01  11   ---------------------------------------------------------------...............------------  25
J  100.0% (47/47)   IGHJ6*02     16   -------------------------------------------------------------------------------------.....  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_618    284  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  325
J  100.0% (47/47)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_282772

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           321     6e-90
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_619    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_619    91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_619    181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.8% (225/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_619    271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_54241

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         349     3e-98
IGHD6-19*01                                                                                           14.1    9.5  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AACATACAT	CAGTGTCTGG	GGGATAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATACATCAGTGTCTGGGGGATATTGGTTCGACCCC	AKHTSVSGGYWFDP	290	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	76	72	70	2	0	97.2
CDR1-IMGT	77	100	24	18	6	0	75
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	95	19	0	83.3
CDR3-IMGT (germline)	290	293	4	4	0	0	100
Total	N/A	N/A	289	256	33	0	88.6


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  D  S  G  H  T  F  F  N 
                    Query_620      5    GTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGAATCTCCTGTAAGGATTCTGGACACACCTTTTTCAAC  94
V  88.6% (256/289)  IGHV5-10-1*01  4    .....................................................G.............G.......T...G....AC..G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         H  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Q  S  H  Y  S 
                    Query_620      95   CACTGGATCAGTTGGGTGCGCCAGATGCCCGGTAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTCAAAGTCACTATAGT  184
V  88.6% (256/289)  IGHV5-10-1*01  94   T..........C....................G..........................................T.T.CCA....C..C  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  E  G  H  V  T  L  S  V  D  K  A  T  S  T  A  Y  L  Q  W  S  S  L  K  T  S  D  T 
                    Query_620      185  CCGTCCTTCGAAGGCCATGTCACACTCTCAGTTGACAAGGCCACCAGTACTGCCTACCTGCAGTGGAGCAGTCTCAAGACCTCGGACACC  274
V  88.6% (256/289)  IGHV5-10-1*01  184  .........C.......C.....CA......C.......T...T...C.......................C..G...G...........  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><----------------CDR3-IMGT--------------->                                 
                                         G  F  Y  F  C  A  K  H  T  S  V  S  G  G  Y  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_620      275  GGCTTTTATTTTTGTGCGAAACATACATCAGTGTCTGGGGGATATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCA  364
V  88.6% (256/289)  IGHV5-10-1*01  274  .C.A.G....AC.......-----------------------------------------------------------------------  292
                                         A  M  Y  Y  C  A                                                                         
D  90.0% (9/10)     IGHD6-19*01    9    ----------------------------.....G....----------------------------------------------------  18
J  97.8% (45/46)    IGHJ5*02       6    ---------------------------------------------...................................C.........  50

                                         
                                         
                    Query_620      365  G  365
J  97.8% (45/46)    IGHJ5*02       51   .  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_334596

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           346     2e-97
IGHD3-3*01                                                                                            14.1    8.5  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	CTG	TTTTTGG	CGCAGCGAATGATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCTGTTTTTGGCGCAGCGAATGATAACTACGGTATGGGCGTC	ARAVFGAANDNYGMGV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_621    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGGTATTGGATACACTGGGTCCGTCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-74*01  47   ..............................................C..C.....G...........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  H  I  N  S  D  G  S  T  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_621    91   TTTGGGTCTCACATATTAACAGTGATGGGAGTACCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-74*01  137  .G..........G......T.............G.....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  V  F  G  A  A  N  
                    Query_621    181  AGAATACCCTGTATCTACAATTGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGAGCTGTTTTTGGCGCAGCGAATG  270
V  94.4% (235/249)  IGHV3-74*01  227  ....C..G........G...A...............................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-3*01   10   ------------------------------------------------------------------------.......-----------  16

                                      T------------------>                                 
                                      D  N  Y  G  M  G  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_621    271  ATAACTACGGTATGGGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  98.0% (49/50)    IGHJ6*02     13   ---............A.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_218866

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_622    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       R  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_622    91   CGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.2% (226/245)  IGHV4-59*01  139  T.......G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_622    181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.2% (226/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_622    271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_218867

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         338     5e-95
IGHD3-9*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAGGGGA	ACGATATTTTGGCTGG	GGTCCTGGACCCACC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATAAGGGGAACGATATTTTGGCTGGGGTCCTGGACCCACCCTACGACTCCTACGGTATGGACGTC	ARDKGNDILAGVLDPPYDSYGMDV	246	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  P  I  N  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_623      4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCCCCATCAACAGTGGTAGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  93.2% (233/250)  IGHV4-30-4*01  50   .....TCC...A.....A..............T......G.......GA.........................................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  Y  R  G  R  A  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  
                    Query_623      94   TGGAGTGGATTGGGTACATCTATTACCGTGGGCGCGCCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCATTAGACACGTCCA  183
V  93.2% (233/250)  IGHV4-30-4*01  140  ..........................A.....A..A.........................................G............  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><---------------------------
                                        K  N  Q  F  S  L  K  L  Y  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  K  G  N  D  I  L  
                    Query_623      184  AGAACCAGTTCTCCCTGAAGCTGTACTCTGTGACGGCCGCAGACACGGCGGTGTATTACTGTGCCAGAGATAAGGGGAACGATATTTTGG  273
V  93.2% (233/250)  IGHV4-30-4*01  230  .......................AG.........T..............C....................--------------------  299
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  93.8% (15/16)    IGHD3-9*01     6    ------------------------------------------------------------------------------...........A  17

                                        ----CDR3-IMGT------------------------------>                                 
                                        A  G  V  L  D  P  P  Y  D  S  Y  G  M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_623      274  CTGGGGTCCTGGACCCACCCTACGACTCCTACGGTATGGACGTCTGGGGCCAGGGGACCACGGTCAGCGTCTCCTCA  350
D  93.8% (15/16)    IGHD3-9*01     18   ....-------------------------------------------------------------------------  21
J  93.1% (54/58)    IGHJ6*02       5    -------------------....T...A........................A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_218864

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_624    4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.0% (227/244)  IGHV4-59*01  50   .....TCC...A....C.....................A...G...........G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N  
                    Query_624    94   GGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACC  183
V  93.0% (227/244)  IGHV4-59*01  140  .......G..................A...............C...................................C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D  
                    Query_624    184  AGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGACG  273
V  93.0% (227/244)  IGHV4-59*01  230  ........C....G.....C..........................G...........G.....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  94.8% (55/58)    IGHJ6*02     5    -------------------------------------------------------------------.....AC................  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_624    274  TCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  308
J  94.8% (55/58)    IGHJ6*02     28   ........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_218862

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_625    1    ACCCTGTCCCTCACCTGCACTGTTTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   .......................C................G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_625    91   TGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  ........G...A..T...............................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y 
                    Query_625    181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTAC  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............C....C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_625    271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_218863

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD2-21*01                                                                                           18.0    0.59 
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CAGTTTCTGTCTTAGTTTGGACCGGGGAGT	TTGTGGTGG	N/A	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGGGGAGTTTGTGGTGGTTTTGATATG	ARGSFCLSLDRGVCGGFDM	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  N  G  G  S  L  N  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_626    1    ACCCTGTCCCTCACCTGCGCCGTCAATGGTGGGTCCCTCAATGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAG  90
V  92.2% (226/245)  IGHV4-34*01  49   ....................T...T...........T...G..G.......................................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  Q  S  G  T  T  N  Y  K  P  S  L  K  S  R  V  I  T  S  V  D  T  S  K  N 
                    Query_626    91   TGGATTGGGGAAATCAATCAAAGTGGCACCACCAACTACAAGCCGTCCCTCAAGAGTCGAGTAATCACATCGGTGGACACGTCCAAGAAT  180
V  92.2% (226/245)  IGHV4-34*01  139  ....................T.....A.G............C....................C.C..T...A..A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  F  C  L  S  L  D  R 
                    Query_626    181  CAGTTCTCCTTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGG  270
V  92.2% (226/245)  IGHV4-34*01  229  .........C.....C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      ----------------------->                               
                                       G  V  C  G  G  F  D  M  W  G  Q  G  T  M  V  T  V  S  
                    Query_626    271  GGAGTTTGTGGTGGTTTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTT  325
D  100.0% (9/9)     IGHD2-21*01  7    -----.........-----------------------------------------  15
J  97.6% (40/41)    IGHJ3*02     7    --------------.........C...............................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_218860

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           352     3e-99
IGHD3-3*01                                                                                            10.3    115  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGCGGAAA	GATTT	C	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGCGGAAAGATTTCCTACTTTGACTAC	ARRGKISYFDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	234	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  H  G  S  I  S  G  F  Y  W  S  W  V  R  Q  S  P  G  K  G  L  E 
                    Query_627    1    ACCCTGTCCCTCACCTGCACTGTCTCTCATGGCTCCATCAGTGGTTTCTACTGGAGCTGGGTCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  96.3% (234/243)  IGHV4-59*01  49   ...........................GG.............A...A.............A........C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  G  T  M  S  V  D  T  S  K  N 
                    Query_627    91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGGCACCATGTCAGTAGACACGTCCAAGAAC  180
V  96.3% (234/243)  IGHV4-59*01  139  .............................................................T......A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  K  I  S  Y  F  D  Y 
                    Query_627    181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGACGCGGAAAGATTTCCTACTTTGACTAC  270
V  96.3% (234/243)  IGHV4-59*01  229  ...................G...........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-3*01   8    -----------------------------------------------------------------------.....--------------  12
J  97.9% (46/47)    IGHJ4*02     2    -----------------------------------------------------------------------------.............  14

                                                                        
                                       W  G  L  G  T  L  V  T  V  S  S  
                    Query_627    271  TGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  304
J  97.9% (46/47)    IGHJ4*02     15   .......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_218861

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           414     5e-118
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ3*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AGGGG	AGTGGGAGC	CCCTTCTTAGAGGCA	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAAGGGGAGTGGGAGCCCCTTCTTAGAGGCACTTTTGATATC	AKEGEWEPLLRGTFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  S  A  V  K  V  A  C  K  A  S  G  G  T  F  S  N  Y
                    Query_628    1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGTCCGCGGTGAAAGTCGCCTGCAAGGCTTCTGGAGGCACCTTCAGCAACTA  90
V  95.5% (278/291)  IGHV1-69*01  6    ..................G..........A.............T.......G...T..............................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  F  F  G  T  A  N  Y  A  Q
                    Query_628    91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTTTCTTTGGTACAGCAAACTACGCACA  180
V  95.5% (278/291)  IGHV1-69*01  96   ....................................................G...........A.........................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  L  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  F  M  E  L  S  G  L  R  S  E  D  T  A
                    Query_628    181  GAGGTTGCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTTCATGGAGCTGAGCGGCCTGAGATCTGAGGACACGGC  270
V  95.5% (278/291)  IGHV1-69*01  186  ..A...C..............................................A.............A......................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  K  E  G  E  W  E  P  L  L  R  G  T  F  D  I  W  G  Q  G  T  M  V  I  V  S
                    Query_628    271  CGTGTATTACTGTGCGAAAGAAGGGGAGTGGGAGCCCCTTCTTAGAGGCACTTTTGATATCTGGGGCCAAGGGACAATGGTCATCGTCTC  360
V  95.5% (278/291)  IGHV1-69*01  276  .................G...---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (9/9)     IGHD1-26*01  6    --------------------------.........-------------------------------------------------------  14
J  97.8% (44/45)    IGHJ3*02     6    --------------------------------------------------.................................C......  45

                                           
                                        S  
                    Query_628    361  TTCAG  365
J  97.8% (44/45)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_54242

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           367     5e-104
IGHD3-22*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTACCGGC	AGTGGTTA	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTACCGGCAGTGGTTATTTGACTAC	ARHYRQWLFDY	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	243	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  R 
                    Query_629    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGAAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGAGG  90
V  96.8% (243/251)  IGHV4-39*01  49   .........................................C.............................................G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_629    91   CTGGGGTGGATTGGGAGTTTGTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  96.8% (243/251)  IGHV4-39*01  139  ....A.............A.C.....................................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  H  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  Q  W  L  F 
                    Query_629    181  AAGAACCACTTGTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTTTATTACTGTGCGAGACATTACCGGCAGTGGTTATTT  270
V  96.8% (243/251)  IGHV4-39*01  229  ........G..C.........................................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-22*01  17   -------------------------------------------------------------------------------........---  24
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_629    271  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (43/43)   IGHJ4*02     9    ........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_218868

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            332     3e-93
IGHD1-26*01                                                                                           10.3    121  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTGCCAT	GGAGC	AATGGACCCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTGCCATGGAGCAATGGACCCAATACTACTTTGACGCC	ARSAMEQWTQYYFDA	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_630    1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAGTAGTTATTGGATGACCTGGGTCCGCCAGGCTCCAGGTAAGGGGCTGG  90
V  92.7% (230/248)  IGHV3-7*01   47   .....................C........................C..........G.....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  V  E  Y  Y  V  D  S  V  R  G  R  F  T  M  S  R  D  N  A  
                    Query_630    91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGTGGAATACTACGTGGACTCTGTGAGGGGCCGATTCACCATGTCCAGAGACAACGCCA  180
V  92.7% (230/248)  IGHV3-7*01   137  ....................C............A.A.......T.............A...............C................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  S  V  S  L  Q  M  S  S  L  T  A  E  D  T  A  V  Y  Y  C  A  R  S  A  M  E  Q  W  T  
                    Query_630    181  GGAACTCAGTCTCTCTGCAAATGAGCAGCCTGACAGCCGAGGACACGGCTGTATACTACTGTGCGAGATCTGCCATGGAGCAATGGACCC  270
V  92.7% (230/248)  IGHV3-7*01   227  A.......C.G.A...........A........G..................G..T............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  10   ----------------------------------------------------------------------------.....---------  14

                                      ---------------->                                
                                      Q  Y  Y  F  D  A  W  G  Q  G  T  L  V  T  V  S  S
                    Query_630    271  AATACTACTTTGACGCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
J  95.7% (44/46)    IGHJ4*02     1    ---...........TA.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_218869

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            355     3e-100
IGHD6-19*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCGGCG	GTGGCTGG	AT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGGCGGTGGCTGGATCTTTGACTAC	AAGGGWIFDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  R  N  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_631    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAGAAACTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.3% (236/245)  IGHV3-7*03   47   ....................................C......T.G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  A  T  Y  Y  L  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_631    91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGCGACATACTATCTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.3% (236/245)  IGHV3-7*03   137  .................................A..A.......G.............................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  A  G  G  G  W  I  F  D  
                    Query_631    181  AGAACACAGTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGGCCGGCGGTGGCTGGATCTTTGACT  270
V  96.3% (236/245)  IGHV3-7*03   227  .....T..C........................................................-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD6-19*01  11   ------------------------------------------------------------------------........----------  18
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------........  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_631    271  ACTGGGGCCAGGGAACCCTGGTCAGCGTCTCTTCAG  306
J  95.5% (42/44)    IGHJ4*02     13   ........................C......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_167722

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           315     5e-88
IGHD1-20*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGAATACAA	GTATAAC	GGAATAGGG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGAATACAAGTATAACGGAATAGGGATGGACGTC	TRSEYKYNGIGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  E  S  R  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_632    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCGGGGTTCACCGAAAGTAGGAATTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  91.0% (223/245)  IGHV3-53*01  47   ............................T..........TC.....C..C.......G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  M  
                    Query_632    91   AGTGGGTCTCAGTTATTTATAGTGGTGGTACCACACACTACGCAGATTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCATGA  180
V  91.0% (223/245)  IGHV3-53*01  137  ......................C.......G....T..........C..C...........A.........................A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      T  T  L  F  L  Q  M  N  S  L  R  A  E  D  S  A  V  Y  Y  C  T  R  S  E  Y  K  Y  N  G  I  
                    Query_632    181  CCACATTGTTTCTTCAAATGAACAGTTTGAGAGCCGAGGACTCGGCCGTGTATTACTGTACGAGATCAGAATACAAGTATAACGGAATAG  270
V  91.0% (223/245)  IGHV3-53*01  227  A...GC...A...............CC..............A.................G.....-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD1-20*01  2    ----------------------------------------------------------------------------.......-------  8

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_632    271  GGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (42/42)   IGHJ6*02     21   --..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_38596

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           305     3e-85
IGHD3-3*01                                                                                            31.5    6e-05
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGGCCCCGGATCCGAT	TTACGATTTTTGGACTGGT	GATATCAAGGCCGCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGGCCCCGGATCCGATTTACGATTTTTGGACTGGTGATATCAAGGCCGCTTACTTTGGCCTC	ARAPDPIYDFWTGDIKAAYFGL	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	220	25	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  R  D  S  T  M  N  W  V  R  Q  A  P  G  T  G  L  
                    Query_633    1    GGTCCCTGAGACTCTCCTGTGCTGCCTCTGGATTCAACTTTAGAGACTCTACTATGAACTGGGTCCGCCAGGCTCCAGGGACGGGGCTGG  90
V  89.8% (220/245)  IGHV3-23*01  47   ......................A.............C......CAG..A.G.C....G.......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  N  G  R  K  T  Y  S  A  V  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_633    91   AGTGGGTCTCAGGTATCAGTGGTAATGGTCGTAAAACATACTCCGCAGTCTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  89.8% (220/245)  IGHV3-23*01  137  ............C...T.......G....G...GC.......A.....A.........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  S  L  Q  M  N  S  L  R  H  E  D  T  A  V  Y  F  C  A  R  A  P  D  P  I  Y  D  
                    Query_633    181  AGAACACTCTGTCTCTTCAAATGAACAGCCTGAGACACGAGGACACGGCCGTTTATTTCTGTGCGCGGGCCCCGGATCCGATTTACGATT  270
V  89.8% (220/245)  IGHV3-23*01  227  .......G....A...G..................GC...............A....A.......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.7% (18/19)    IGHD3-3*01   4    ----------------------------------------------------------------------------------........  11

                                      -CDR3-IMGT--------------------------->                                  
                                      F  W  T  G  D  I  K  A  A  Y  F  G  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_633    271  TTTGGACTGGTGATATCAAGGCCGCTTACTTTGGCCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
D  94.7% (18/19)    IGHD3-3*01   12   ......G....-------------------------------------------------------------  22
J  93.5% (43/46)    IGHJ4*02     3    --------------------------.......A.TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_38595

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           321     7e-90
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TGAACGTGGCTGAG	GTGGCTAC	AACCTTAGGCGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTGAACGTGGCTGAGGTGGCTACAACCTTAGGCGGC	AKVNVAEVATTLGG	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  F  S  I  Y  S  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_634    1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTGGATTCACCTTCAGTATCTACAGTCTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.2% (227/249)  IGHV3-21*01  47   .....................C..C....................G...T..CA...A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  N  S  K  S  V  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  D  
                    Query_634    91   AGTGGGTCTCATCCATTAATAGTAAGAGTGTTCACATATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGACA  180
V  91.2% (227/249)  IGHV3-21*01  137  ..................G.....GT...AG.T..........C........A..................................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  F  L  H  M  S  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  V  N  V  A  E  V  A  
                    Query_634    181  AGAACTCACTGTTTCTGCACATGAGCAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGAAAGTGAACGTGGCTGAGGTGGCTA  270
V  91.2% (227/249)  IGHV3-21*01  227  ............A......A....A.........................G.G.............G..---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD5-12*01  10   -----------------------------------------------------------------------------------.......  16

                                      ------------->                                  
                                      T  T  L  G  G  W  G  Q  G  T  L  F  T  V  S  A  
                    Query_634    271  CAACCTTAGGCGGCTGGGGCCAGGGAACCCTGTTCACCGTCTCCGCAG  318
D  100.0% (8/8)     IGHD5-12*01  17   .-----------------------------------------------  17
J  94.3% (33/35)    IGHJ4*02     14   -------------...................G...........T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_167721

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           420     7e-120
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	CCTTGAACATCCA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCTTGAACATCCATGATGCTTTTGATATC	ARALNIHDAFDI	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	282	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_635    3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGTAAGGCTTCTGGAGGCACCTTCAGC  92
V  95.6% (282/295)  IGHV1-69*06  1    .......................G.........................................C........................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  A  I  T  W  V  R  Q  A  P  G  R  G  L  E  W  M  G  G  I  I  P  I  F  G  T  L  N  Y 
                    Query_635    93   ACCTATGCTATCACCTGGGTGCGACAGGCCCCTGGACGAGGGCTTGAGTGGATGGGAGGGATCATCCCTATATTTGGTACACTAAACTAC  182
V  95.6% (282/295)  IGHV1-69*06  91   .G...........G.......................A.................................C.........GC.......  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  I  T  I  T  A  D  K  S  T  S  T  A  H  M  E  L  S  S  L  K  S  D  D 
                    Query_635    183  GCACAGAAGTTCCAGGGTAGAATCACGATTACCGCGGACAAATCCACGAGCACAGCCCACATGGAGCTGAGCAGCCTGAAATCTGATGAC  272
V  95.6% (282/295)  IGHV1-69*06  181  .................C...G...................................T.....................G......G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  V  Y  Y  C  A  R  A  L  N  I  H  D  A  F  D  I  W  G  Q  G  T  M  V  T  L  S  S  
                    Query_635    273  ACGGCCGTGTATTACTGTGCGAGAGCCTTGAACATCCATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCCTCTCTTCAG  360
V  95.6% (282/295)  IGHV1-69*06  271  .........................---------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                 
J  98.0% (49/50)    IGHJ3*02     1    --------------------------------------........................................G.........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_167726

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           300     8e-84
IGHD1-1*01                                                                                            18.0    0.55 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GTC	TACAACTGG	CGGGAGGGGGCGTTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTCTACAACTGGCGGGAGGGGGCGTTCACTAC	GLQLAGGGVHY	237	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	20	23	4	4	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	106	8	0	93
CDR3-IMGT (germline)	237	237	1	1	0	0	100
Total	N/A	N/A	218	205	13	0	94


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  I  I  W  Y  D
                    Query_636    20   GTCTGGATTCACCTTCAGCAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAATTATATGGTATGA  109
V  94.0% (205/218)  IGHV3-33*01  72   ..................T.GC......................................................G.............  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  H  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_636    110  TGGAAGTAACAAACACTATGCAGACTCCGTCCAGGGCCGATTCACCATATCCAGAGACAATTCCAAGAACACGTTGTATCTGCAAATGAA  199
V  94.0% (205/218)  IGHV3-33*01  162  .........T...T................GA................C........................C................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------CDR3-IMGT----------->                    
                                        S  L  R  V  D  D  T  A  V  Y  Y  C  G  L  Q  L  A  G  G  G  V  H  Y  R  G  Q  G  T  L  V
                    Query_636    200  CAGCCTGAGAGTCGACGACACGGCTGTATATTACTGTGGTCTACAACTGGCGGGAGGGGGCGTTCACTACAGGGGCCAGGGAACCCTGGT  289
V  94.0% (205/218)  IGHV3-33*01  252  ...........C...G...........G..........----------------------------------------------------  289
                                        S  L  R  A  E  D  T  A  V  Y  Y  C                                                      
D  100.0% (9/9)     IGHD1-1*01   3    -----------------------------------------.........----------------------------------------  11
J  97.4% (38/39)    IGHJ4*02     10   -----------------------------------------------------------------.....T...................  34

                                                    
                                        T  V  S  S  
                    Query_636    290  CACCGTCTCCTCAG  303
J  97.4% (38/39)    IGHJ4*02     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_38592

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            350     8e-99
IGHD3-16*01                                                                                           14.1    8.4  
IGHJ5*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGC	GTATAATGAT	AAGTCCCCGAATCATA	GGTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGCGTATAATGATAAGTCCCCGAATCATAGGTCCGACTCC	AREAYNDKSPNHRSDS	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  G  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_637    1    ACCCTGTCCCTCACCTGCGCAGTCTCTGGTGCCTCCATCAGCGGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.2% (236/248)  IGHV4-4*02   49   ....................T..........G..........A...............................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  V  G  S  T  N  Y  T  P  S  L  K  S  R  V  T  I  S  V  D  R  S  R 
                    Query_637    91   GAGTGGATTGGGGAAATCTATCATGTTGGGAGCACCAACTACACCCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAGG  180
V  95.2% (236/248)  IGHV4-4*02   139  ........................AG.................A......................................A.....A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  N  D  K  S  P 
                    Query_637    181  AACCAGTTCTCCCTCAATCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGAGGCGTATAATGATAAGTCCCCG  270
V  95.2% (236/248)  IGHV4-4*02   229  ..............G..G....G...........................G.................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  90.0% (9/10)     IGHD3-16*01  1    -----------------------------------------------------------------------....T.....---------  10

                                      ----------------->                                  
                                       N  H  R  S  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_637    271  AATCATAGGTCCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  95.6% (43/45)    IGHJ5*01     7    -------...T...............A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_38590

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           408     4e-116
IGHD1-26*01                                                                                           18.0    0.67  
IGHJ6*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCG	GGGCGCTACTAC	TCTCCCCCCCACAAAAGG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGGGGCGCTACTACTCTCCCCCCCACAAAAGGCGGTATGGACGTC	ARLRGATTLPPTKGGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  F  T  N  Y
                    Query_638    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGGTTCACCAATTA  90
V  95.2% (275/289)  IGHV5-51*03  6    ..............................................................................C..T....GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  I  Y  S  P
                    Query_638    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCAGATACCATTTACAGTCC  180
V  95.2% (275/289)  IGHV5-51*03  96   ........................................................................T.......GA.....C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  R  V  T  M  S  V  D  R  S  I  S  T  A  Y  L  Q  W  S  S  L  R  A  S  D  P  A
                    Query_638    181  GTCCTTCCAAGGCCGGGTCACCATGTCAGTCGACAGGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACCCCGC  270
V  95.2% (275/289)  IGHV5-51*03  186  ..............A.........C....C.....A......................................A..........A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  L  R  G  A  T  T  L  P  P  T  K  G  G  M  D  V  W  G  P  G  T  P  V  S
                    Query_638    271  CATGTATTACTGTGCGAGACTTCGGGGCGCTACTACTCTCCCCCCCACAAAAGGCGGTATGGACGTCTGGGGCCCAGGGACCCCGGTCTC  360
V  95.2% (275/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD1-26*01  9    ------------------------...A........------------------------------------------------------  20
J  93.5% (43/46)    IGHJ6*02     17   ------------------------------------------------------....................A.......A.....A.  52

                                                
                                        V  S  S 
                    Query_638    361  CGTCTCCTCA  370
J  93.5% (43/46)    IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_167729

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           357     1e-100
IGHD2-15*01                                                                                           12.2    31    
IGHJ1*01                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAACAGGGG	GGTGGT	N/A	TTCCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAACAGGGGGGTGGTTTCCACCAC	AKDKQGGGFHH	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  P  P  G  K  G  P  
                    Query_639    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCCGG  90
V  95.6% (239/250)  IGHV3-30*18  47   .......................................................................G...............T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  L  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_639    91   AGTCGCTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.6% (239/250)  IGHV3-30*18  137  ...G.G....................................................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  S  G  L  R  S  D  D  T  A  V  Y  Y  C  A  K  D  K  Q  G  G  G  F  
                    Query_639    181  AGAACACGCTGTTTCTGCAAATGAGCGGCCTGAGAAGTGACGACACGGCTGTTTATTACTGTGCGAAAGATAAACAGGGGGGTGGTTTCC  270
V  95.6% (239/250)  IGHV3-30*18  227  ............A...........A.A........GC...G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-15*01  14   --------------------------------------------------------------------------------......----  19
J  93.0% (40/43)    IGHJ1*01     10   --------------------------------------------------------------------------------------....  13

                                      ---->                                  
                                      H  H  W  G  Q  G  T  T  V  T  V  S  S  
                    Query_639    271  ACCACTGGGGCCAGGGCACCACGGTCACCGTCTCCTCAG  309
J  93.0% (40/43)    IGHJ1*01     14   .G..................CT.................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_64662

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           406     1e-115
IGHD2-8*02                                                                                            12.2    34    
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	A	GTACTG	ACACC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTACTGACACCGACTAT	ARSTDTDY	289	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	69	2	0	97.2
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  R  K  P  G  D  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  
                    Query_640    5    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCGGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACT  94
V  94.8% (275/290)  IGHV5-51*03  5    ..............................A............G..................................G........G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  A  T  T  R  Y  S  
                    Query_640    95   ACTGGATCGGCTGGGTGCGCCAGAGGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACGCTACTACCAGATACAGCC  184
V  94.8% (275/290)  IGHV5-51*03  95   ........................T...............................A..............T..GA..............  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  E  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  S  
                    Query_640    185  CGTCGTTCGAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACAGCG  274
V  94.8% (275/290)  IGHV5-51*03  185  ....C...C..............A................................C..............................C..  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-------CDR3-IMGT------>                                  
                                      A  M  Y  Y  C  A  R  S  T  D  T  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_640    275  CCATGTATTATTGTGCGAGAAGTACTGACACCGACTATTGGGGCCAGGGCACCCTGGTCATCGTCTCCTCAG  346
V  94.8% (275/290)  IGHV5-51*03  275  ..........C.........----------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                     
D  100.0% (6/6)     IGHD2-8*02   9    ---------------------......---------------------------------------------  14
J  92.5% (37/40)    IGHJ4*02     9    --------------------------------.....C...........A..........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_38599

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           304     9e-85
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	219	25	0	89.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E  
                    Query_641    4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAGT  93
V  89.8% (219/244)  IGHV4-59*02  50   .....TCC...A..................G..........AG...C.......G.............C...........G.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N  
                    Query_641    94   GGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAACC  183
V  89.8% (219/244)  IGHV4-59*02  140  ......G....A...A.T.......G.G............C..C....................CA........................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------CDR3-IMGT--------->    
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W  
                    Query_641    184  AGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGGG  273
V  89.8% (219/244)  IGHV4-59*02  230  ..........G.A.........................A.......G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  90.0% (45/50)    IGHJ3*02     1    ----------------------------------------------------------------------...T..T..T..........  20

                                                                    
                                      G  P  G  T  M  V  T  V  S  S  
                    Query_641    274  GCCCAGGGACAATGGTCACCGTGTCTTCAG  303
J  90.0% (45/50)    IGHJ3*02     21   ...A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_38598

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           352     3e-99
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCATAGGGGTG	ATTACGATTTTTGGAGGGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCATAGGGGTGATTACGATTTTTGGAGGGGTTATTGACTACTTCGACTAC	ARSIGVITIFGGVIDYFDY	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	234	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_642    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (234/243)  IGHV4-59*08  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  S  T  K  Y  N  P  S  L  Q  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_642    91   TGGATTGGTTATGTGTATTACAGTGGGAGCACCAAGTATAACCCCTCGCTCCAGAGTCGAGTCACCATATCACTAGACACCTCCAAGAAC  180
V  96.3% (234/243)  IGHV4-59*08  139  ........G...A.C....................C..C........C...A....................G.......G.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  I  G  V  I  T  I  F  G 
                    Query_642    181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGATCCATAGGGGTGATTACGATTTTTGGA  270
V  96.3% (234/243)  IGHV4-59*08  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.8% (23/24)    IGHD3-3*01   3    ---------------------------------------------------------------------------...............  17

                                      ----------------------->                                  
                                       G  V  I  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_642    271  GGGGTTATTGACTACTTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.8% (23/24)    IGHD3-3*01   18   .T.......-------------------------------------------------  26
J  97.9% (47/48)    IGHJ4*02     1    ----------.......T........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_240980

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           341     5e-96
IGHD6-6*01                                                                                            10.3    123  
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TCGTC	GGCCGAACCCTTCTAACA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTCGGCCGAACCCTTCTAACAACTACTACAACGGTTTGGACGTC	ARDRRPNPSNNYYNGLDV	237	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	24	0	0	100
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	110	4	0	96.5
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	232	225	7	0	97


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  
                    Query_643    13   GTGCAGTCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTA  102
V  97.0% (225/232)  IGHV3-11*06  65   ......C...................................................................................  154
                                         A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  T  S  T  S  Y  T  K  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  F  L  
                    Query_643    103  GTACTAGTACTAGTTACACAAAGTACTCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTTTCTGC  192
V  97.0% (225/232)  IGHV3-11*06  155  ...G.....G............C...G.........................................................A.....  244
                                      S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------------CDR3-IMGT--------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  R  P  N  P  S  N  N  Y  Y  N  G  
                    Query_643    193  AAATGAATAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGTCGGCCGAACCCTTCTAACAACTACTACAACGGTT  282
V  97.0% (225/232)  IGHV3-11*06  245  .......C............................................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (5/5)     IGHD6-6*01   13   ----------------------------------------------------.....---------------------------------  17
J  96.4% (54/56)    IGHJ6*02     7    ---------------------------------------------------------------------------........T.....A  21

                                      ------->                                 
                                      L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_643    283  TGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.4% (54/56)    IGHJ6*02     22   .........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_57939

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	247	223	21	3	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_644    1    ACCCTGTCCCTCACCTGCATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  87
V  90.3% (223/247)  IGHV4-4*02   49   ..................GC.........T...TCC......A..AG........GG.......................G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  K 
                    Query_644    88   GAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCAAG  177
V  90.3% (223/247)  IGHV4-4*02   139  .......................T......A................................G.......A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G  W 
                    Query_644    178  AATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGTGGGTAGCAGTGGCTGG  267
V  90.3% (223/247)  IGHV4-4*02   229  ..CC.GT..........G....GC..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-19*01  6    -----------------------------------------------------------------------------.............  18

                                      -------->                                
                                       L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_644    268  CTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  308
J  95.0% (38/40)    IGHJ4*02     7    -......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_240981

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGATGGCCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTC	VRQSSDGRTKYGMDV	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	70	1	0	98.6
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	110	4	0	96.5
CDR3-IMGT (germline)	292	299	8	7	1	0	87.5
Total	N/A	N/A	292	279	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  S  
                    Query_645    8    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCAGTT  97
V  95.5% (279/292)  IGHV5-51*01  5    .....................................C.......................................AG.........C.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  T  G  L  E  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  S  
                    Query_645    98   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGTGGATGGGGATCATCTTTCCGGATGACTCTGATACCAGATACAGCC  187
V  95.5% (279/292)  IGHV5-51*01  95   .................................A..........................A...T.G.......................  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_645    188  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCG  277
V  95.5% (279/292)  IGHV5-51*01  185  .............................................G.....................C......................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------CDR3-IMGT----------------->                           
                                      A  K  Y  Y  C  V  R  Q  S  S  D  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_645    278  CCAAGTATTATTGTGTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  363
V  95.5% (279/292)  IGHV5-51*01  275  ...T......C....C......----------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                   
J  100.0% (42/42)   IGHJ6*02     15   --------------------------------------------..........................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_342760

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-9*01                                                                                            12.2    31   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAG	GACTGG	CTGATTCCTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGACTGGCTGATTCCTTACTACTTTGACTTC	ARAKDWLIPYYFDF	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_646    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*01  49   ........................................................C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  H  S  G  G  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_646    91   TGGATTGGCAATATCTATCACAGTGGGGGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.9% (234/244)  IGHV4-59*01  139  ........GT........T........A..............................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  E  V  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  A  K  D  W  L  I  P  Y  Y 
                    Query_646    181  CAGTTCTCCCTGGAGGTGAGCTCTGTGACCGCTGCGGACACGGCCATTTATTACTGTGCGAGAGCTAAGGACTGGCTGATTCCTTACTAC  270
V  95.9% (234/244)  IGHV4-59*01  229  ............A..C.............................G.G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-9*01   16   ---------------------------------------------------------------------......---------------  21
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_646    271  TTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    .......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_327645

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            367     5e-104
IGHD1-1*01                                                                                            10.3    115   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	TACAA	TA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTACAATAACTTTGACTAC	ARGYNNFDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	27	0	0	100
FR2-IMGT	57	107	51	51	0	0	100
CDR2-IMGT	108	128	21	21	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                     <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                        S  L  R  L  S  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_647   1    GGTCCCTGAGACTCTCCTGCGCTGTGTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  97.2% (242/249)  IGHV4-4*01  47   ..A.....TCC...A..........C................................................................  136
                                        T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                     ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                     L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  
                    Query_647   91   TGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCA  180
V  97.2% (242/249)  IGHV4-4*01  137  ..........................................................................................  226
                                     L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                     -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                     K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  N  N  F  D  Y  
                    Query_647   181  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTACAATAACTTTGACTACT  270
V  97.2% (242/249)  IGHV4-4*01  227  .........................................................G...........---------------------  295
                                     K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                       
D  100.0% (5/5)     IGHD1-1*01  3    -----------------------------------------------------------------------.....--------------  7
J  100.0% (45/45)   IGHJ4*02    4    ------------------------------------------------------------------------------............  15

                                                                      
                                     W  G  Q  G  T  L  V  T  V  S  S  
                    Query_647   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (45/45)   IGHJ4*02    16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_240983

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           282     3e-78
IGHD6-6*01                                                                                            14.1    8.3  
IGHJ3*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-6*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCC	AGTATCGAAGATCGTC	GGCTGGTTTCTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCAGTATCGAAGATCGTCGGCTGGTTTCTCTTGATATC	ARPSIEDRRLVSLDI	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	211	31	0	87.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  R  G  Y  Y  W  S  W  L  R  Q  S  P  G  K  G  L  Q  
                    Query_648    4    CCCTGAGACTCTCCTGCGCTGTTTATGGCGGATCATTCAGGGGCTACTACTGGAGTTGGCTCCGCCAGTCCCCAGGGAAGGGGCTGCAGT  93
V  87.2% (211/242)  IGHV4-34*01  50   .....TCC...A..........C.....T..G..C.....T..T...........C...A........C.................G...  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  R  G  I  T  N  Y  I  P  S  L  K  S  R  L  T  M  S  V  D  T  S  K  N  
                    Query_648    94   GGATTGGAGAAATCAATCACAGAGGGATCACCAATTACATCCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACACCTCCAAGAATC  183
V  87.2% (211/242)  IGHV4-34*01  140  .......G...........T..T..A.G......C....A...................G.......A...........G........C.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  S  I  E  D  R  R  L  V  
                    Query_648    184  AATTCTCCCTGAAACTTAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGACCCAGTATCGAAGATCGTCGGCTGGTTT  273
V  87.2% (211/242)  IGHV4-34*01  230  .G...........G..G..C.......................T..G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  81.2% (13/16)    IGHD6-6*01   2    -----------------------------------------------------------------.....A.C..C.....---------  17

                                      ---------->                                  
                                      S  L  D  I  W  G  Q  G  T  M  V  V  V  S  S  
                    Query_648    274  CTCTTGATATCTGGGGCCAAGGGACAATGGTCGTTGTCTCTTCAG  318
J  92.9% (39/42)    IGHJ3*02     9    ---.............................ACC..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_250683

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           416     2e-118
IGHD3-16*01                                                                                           12.2    37    
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGA	AATTGGTAACACCTAATTGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTC	ARRGKLVTPNWDYGMDV	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	71	4	0	94.7
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	294	280	14	0	95.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  P  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_649    2    CAGATGCAGCTGGTGCAGCCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  91
V  95.2% (280/294)  IGHV1-18*04  1    ...G.T............T......C................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  C  Y  N  G  N  T  K  Y 
                    Query_649    92   AACTACGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGTTGTTACAATGGTAACACAAAGTAT  181
V  95.2% (280/294)  IGHV1-18*04  91   .G...............................................................CGC..................C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  L  K  H  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_649    182  GCACTGAAGCACCAGGGCAGAGTCACCATGACCACAGACACATCGACGAGCACAGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGAC  271
V  95.2% (280/294)  IGHV1-18*04  181  ....A.....T.................................C..............C..............................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><--------------------CDR3-IMGT-------------------->                     
                                       T  A  V  Y  Y  C  A  R  R  G  K  L  V  T  P  N  W  D  Y  G  M  D  V  W  G  Q  G  T  T  V 
                    Query_649    272  ACGGCCGTTTATTACTGTGCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTC  361
V  95.2% (280/294)  IGHV1-18*04  271  ........G...............------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD3-16*01  18   -------------------------......-----------------------------------------------------------  23
J  100.0% (50/50)   IGHJ6*02     13   ----------------------------------------------------......................................  50

                                                  
                                       T  V  S  S 
                    Query_649    362  ACCGTCTCCTCA  373
J  100.0% (50/50)   IGHJ6*02     51   ............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_327643

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           12.2    33   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCGG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGGAACTGGTTCGACCCC	ARGGWRRQRNWFDP	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	47	4	0	92.2
CDR2-IMGT	126	146	21	18	3	0	85.7
FR3-IMGT	147	260	114	102	12	0	89.5
CDR3-IMGT (germline)	261	268	8	7	1	0	87.5
Total	N/A	N/A	268	240	28	0	89.6


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  F  D  E  S  L  S  G  Y  Y  W  S  W  L  R  
                    Query_650    1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACTTGCGCTGTGTTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCC  90
V  89.6% (240/268)  IGHV4-34*01  26   ........T.......T....................C........C.A..G..G......C.................C...A.C....  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  S  H  S  G  S  T  R  Y  N  P  A  L  R  S  R  V  T  
                    Query_650    91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGGAAATCAGTCATAGTGGAAGTACGAGGTACAACCCGGCCCTCAGGAGTCGAGTCACCA  180
V  89.6% (240/268)  IGHV4-34*01  116  ................G......................A............C..C.AC.........T......A..............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      M  S  V  D  T  S  K  K  Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_650    181  TGTCAGTAGACACGTCCAAGAAGCAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTACTGTGCGCGAGGGG  270
V  89.6% (240/268)  IGHV4-34*01  206  .A....................C..GT...........C..A......T.....................G............A....--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------------------.  13

                                      -------CDR3-IMGT--------------->                                  
                                      G  W  R  R  Q  R  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_650    271  GCTGGCGAAGACAGCGGAACTGGTTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  336
D  100.0% (6/6)     IGHD6-19*01  14   .....-------------------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    -----------------.............................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_228699

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           213     2e-57
IGHD3-16*01                                                                                           25.7    0.003
IGHJ3*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACCTAT	GTTTGGGGGAGTT	TACGCCGCAATCACGATTGCCTTAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACCTATGTTTGGGGGAGTTTACGCCGCAATCACGATTGCCTTACTGTC	ARGLLIEDPTYVWGSLRRNHDCLTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	35	16	0	68.6
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	87	27	0	76.3
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	190	54	0	77.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  V  R  Q  P  P  G  G  G  L  Q 
                    Query_651    1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGAACTTACTACTGGCACTGGGTGCGGCAACCTCCAGGGGGGGGTCTGCAG  90
V  77.9% (190/244)  IGHV4-59*01  49   .......................C.......G.......A.T.G..........AG....A.C.....G..C......AA...A...G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  A  M  F  L  S  T  G  T  T  L  Y  N  P  S  V  R  G  R  V  T  V  S  G  D  M  S  R  N 
                    Query_651    91   TGGCTTGCCATGTTCTTATCCACTGGGACCACCCTCTACAACCCCTCCGTCAGGGGTCGTGTCACCGTGTCGGGCGACATGTCTCGGAAT  180
V  77.9% (190/244)  IGHV4-59*01  139  ...A...GGTATA...AT.A..G.....G....AA.............C...A.A....A......A.A..A.TA....C...CAA...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_651    181  CAGTTGTCCCTCAACCTCATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACCTAT  270
V  77.9% (190/244)  IGHV4-59*01  229  .....C.....G..G..G.G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  L  R  R  N  H  D  C  L  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_651    271  GTTTGGGGGAGTTTACGCCGCAATCACGATTGCCTTACTGTCTGGGGCCAGGGGACACCGGTCACCGTCTCTTCAG  346
D  100.0% (13/13)   IGHD3-16*01  14   .............---------------------------------------------------------------  26
J  92.1% (35/38)    IGHJ3*01     13   --------------------------------------............A......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_47519

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           396     2e-112
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCCCGGCAGG	GTGGGATCTACT	TG	ACGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTC	ARHGPAGWDLLDAMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  N  F  N  S  N
                    Query_652    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGTTCTGGATACAACTTTAACAGTAA  90
V  93.5% (272/291)  IGHV5-51*01  6    ....................................C.............A..........................G.....C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_652    91   CTGGATCGGATGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACCAGATATAGGCC  180
V  93.5% (272/291)  IGHV5-51*01  96   .........C..................................................T.......................C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  T  A  D  K  S  T  T  T  A  Y  L  R  W  S  S  R  K  A  S  D  T  A
                    Query_652    181  GTCCTTCCAAGGCCACGTCACCATTACAGCCGACAAGTCCACCACCACCGCCTACCTGCGGTGGAGCAGCCGGAAGGCCTCGGACACCGC  270
V  93.5% (272/291)  IGHV5-51*01  186  ...............G........CT...............T..G..............A...........T..................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        T  Y  Y  C  A  R  H  G  P  A  G  W  D  L  L  D  A  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_652    271  CACTTATTACTGTGCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  93.5% (272/291)  IGHV5-51*01  276  ..TG.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD1-26*01  7    ---------------------------------......G.....---------------------------------------------  18
J  97.9% (46/47)    IGHJ6*02     16   -----------------------------------------------...G.......................................  58

                                          
                                        S 
                    Query_652    361  CTCA  364
J  97.9% (46/47)    IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_47518

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_653    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (226/248)  IGHV3-21*01  47   ............................T............AG...C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  G  
                    Query_653    91   AGTGGGTCTCATCCATCAGTAGTAGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  91.1% (226/248)  IGHV3-21*01  137  ................T........T...AGT......T.C..C..A......G..A..............................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_653    181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  91.1% (226/248)  IGHV3-21*01  227  ....C..................AA...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_653    271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_159481

Length=251
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           276     2e-76
IGHJ4*01                                                                                              31.5    8e-05


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCCTG	N/A	N/A	N/A	GTCAC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	212	84	79	5	0	94
Total	N/A	N/A	212	194	18	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_654    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTTCGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.5% (194/212)  IGHV3-23*01  47   .............................................G..AT........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------FR3-IM
                                      E  W  V  S  T  I  T  E  T  G  R  N  S  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  
                    Query_654    91   AGTGGGTCTCAACTATTACTGAGACTGGTCGTAATTCATACTACGCAGACTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCA  180
V  91.5% (194/212)  IGHV3-23*01  137  ...........G......G..GT.G....G...GCA............................G....C...............T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      GT--------------------------------------------->
                                      K  N  T  L  Y  L  Q  M  N  T  L  V  T  V  S  S  
                    Query_654    181  AGAACACACTGTATCTGCAAATGAACACCCTGGTCACCGTCTCCTCAG  228
V  91.5% (194/212)  IGHV3-23*01  227  .......G...................G....----------------  258
                                      K  N  T  L  Y  L  Q  M  N  S  L                 
J  100.0% (16/16)   IGHJ4*01     33   --------------------------------................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 23652384


Query= Query_159486

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           425     3e-121
IGHD3-22*01                                                                                           23.8    0.012 
IGHJ3*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CGTTATC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTTATCCTTTTGATATC	ARVSREYYDTTGRYPFDI	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	281	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F
                    Query_655    1    GCAGCTGGTGCAGTCTGGAGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTT  90
V  96.9% (281/290)  IGHV3-33*01  6    ..........G.......G..................................................................AG..A  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D
                    Query_655    91   TGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGA  180
V  96.9% (281/290)  IGHV3-33*01  96   ..........................................................................................  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A
                    Query_655    181  CTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGC  270
V  96.9% (281/290)  IGHV3-33*01  186  .....................................T...........C.......................A................  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  T  T  G  R  Y  P  F  D  I  W  G  Q  G  T  I  L  T
                    Query_655    271  TGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTTATCCTTTTGATATCTGGGGCCAAGGGACAATACTCAC  360
V  96.9% (281/290)  IGHV3-33*01  276  ...G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  88.9% (16/18)    IGHD3-22*01  5    -------------------------------..........G..G....-----------------------------------------  22
J  95.6% (43/45)    IGHJ3*02     6    --------------------------------------------------------............................GG....  39

                                                 
                                        V  S  S  
                    Query_655    361  CGTCTCTTCAG  371
J  95.6% (43/45)    IGHJ3*02     40   ...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_159487

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           377     9e-107
IGHD1-26*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAAG	GTACCGTAGG	AGTGGGAGCTACTAC	GGTTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGGTACCGTAGGAGTGGGAGCTACTACGGTTTGGTACTTTGACTAC	AEGTVGVGATTVWYFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	245	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_656    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (245/249)  IGHV3-23*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  A  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_656    91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGCTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  98.4% (245/249)  IGHV3-23*01  137  ..............................G...........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  S  A  V  Y  Y  C  A  E  G  T  V  G  V  G  A  
                    Query_656    181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACTCGGCCGTATATTACTGTGCGGAAGGTACCGTAGGAGTGGGAGCTA  270
V  98.4% (245/249)  IGHV3-23*01  227  ............................................A....................A...---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD1-26*01  6    -------------------------------------------------------------------------------...........  16

                                      GT-------------------->                                  
                                      T  T  V  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_656    271  CTACGGTTTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (15/15)   IGHD1-26*01  17   ....-----------------------------------------------------  20
J  100.0% (46/46)   IGHJ4*02     3    -----------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_159485

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           325     3e-91
IGHD1-1*01                                                                                            12.2    33   
IGHJ3*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCACA	ACT	TACAAC	GGAAACTTAAATGTTGTCAATTT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CCCACAACTTACAACGGAAACTTAAATGTTGTCAATTTTTTTGATGTC	PTTYNGNLNVVNFFDV	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	104	10	0	91.2
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	231	23	0	90.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_657    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGGGCCTGGATGACCTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  90.9% (231/254)  IGHV3-15*01  47   .......T.....................................AC..........G...............T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  I  G  R  I  K  T  T  T  E  G  G  T  T  D  Y  A  A  P  V  R  G  R  F  T  M  S  R  D  
                    Query_657    91   AATGGATTGGCCGTATTAAAACCACCACCGAAGGTGGGACAACAGACTACGCTGCACCCGTGAGAGGCAGATTCACCATGTCAAGAGACG  180
V  90.9% (231/254)  IGHV3-15*01  137  .G...G...............G..AA..T..T...............................A...............C........T.  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  R  N  T  L  F  L  Q  I  N  S  L  K  T  E  D  T  A  L  Y  Y  W  P  T  T  Y  N  G  N  
                    Query_657    181  ATTCAAGAAACACACTGTTTCTTCAAATAAACAGCCTGAAAACCGAGGACACAGCCCTGTATTACTGGCCCACAACTTACAACGGAAACT  270
V  90.9% (231/254)  IGHV3-15*01  227  ......A......G....A...G.....G...........................G..........TA.....----------------  300
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (6/6)     IGHD1-1*01   3    -----------------------------------------------------------------------------......-------  8

                                      R3-IMGT------------------>                                  
                                      L  N  V  V  N  F  F  D  V  W  G  Q  G  T  Q  V  P  A  S  S  
                    Query_657    271  TAAATGTTGTCAATTTTTTTGATGTCTGGGGCCAAGGGACACAGGTCCCCGCCTCTTCAG  330
J  90.9% (40/44)    IGHJ3*01     7    ----------------.........................AT....A...T........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_47510

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           367     6e-104
IGHD3-10*01                                                                                           21.8    0.043 
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGCGCGA	TTCGGGGAGTT	CGTC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGCGCGATTCGGGGAGTTCGTCCTTTGACTTC	ARRRDSGSSSFDF	267	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	48	3	0	94.1
CDR2-IMGT	132	152	21	20	1	0	95.2
FR3-IMGT	153	266	114	105	9	0	92.1
CDR3-IMGT (germline)	267	273	7	7	0	0	100
Total	N/A	N/A	273	254	19	0	93


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  R  D  Y  Y  W  G  W  
                    Query_658    1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTGACCTGCACTGTCTCTGGTGGCTCCATCACCAGTCGTGATTACTACTGGGGCTGGA  90
V  93.0% (254/273)  IGHV4-39*01  26   ................T.................C............................G....A..AG.................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  P  P  G  K  G  L  E  W  I  A  N  I  Y  Y  T  G  S  T  Y  Y  N  P  S  L  N  S  R  
                    Query_658    91   TCCGCCAGCCCCCAGGGAAGGGACTGGAGTGGATTGCGAATATCTATTATACTGGGAGCACCTACTACAATCCGTCCCTCAACAGTCGAG  180
V  93.0% (254/273)  IGHV4-39*01  116  ......................G.............G..G...........G..................C...........G.......  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  S  I  Y  V  D  S  S  K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  M  Y  Y  C  A  
                    Query_658    181  TCAGCATATATGTAGACTCGTCCAAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTATGTATTACTGTGCGA  270
V  93.0% (254/273)  IGHV4-39*01  206  ...C.....CC......A.........................G....G.........................G...............  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      -----------CDR3-IMGT-------------->                                  
                                      R  R  R  D  S  G  S  S  S  F  D  F  W  G  Q  G  I  L  V  I  V  S  S  
                    Query_658    271  GACGGCGCGATTCGGGGAGTTCGTCCTTTGACTTCTGGGGCCAGGGAATCCTGGTCATCGTCTCGTCAG  339
V  93.0% (254/273)  IGHV4-39*01  296  ...------------------------------------------------------------------  298
                                      R                                                                    
D  100.0% (11/11)   IGHD3-10*01  13   ----------...........------------------------------------------------  23
J  90.9% (40/44)    IGHJ4*02     5    -------------------------........A..............C........C......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_159488

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           367     5e-104
IGHD3-3*01                                                                                            39.1    2e-07 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	T	TTACGATTTTTTGAGTGGTTATT	N/A	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATTTACGATTTTTTGAGTGGTTATTACTTC	AIYDFLSGYYF	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	238	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_659    1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (238/241)  IGHV4-34*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_659    91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTGAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (238/241)  IGHV4-34*01  139  ..................................................C.......................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  I  Y  D  F  L  S  G  Y  Y  F 
                    Query_659    181  CAGTTCTCCCTGAAACTGAGCTCTCTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGATTTACGATTTTTTGAGTGGTTATTACTTC  270
V  98.8% (238/241)  IGHV4-34*01  229  ..............G.........G....................................-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.7% (22/23)    IGHD3-3*01   4    --------------------------------------------------------------...........G...........-----  26
J  97.4% (38/39)    IGHJ4*02     10   -------------------------------------------------------------------------------------...A.  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_659    271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  97.4% (38/39)    IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_47512

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69-2*01                                                                                         367     7e-104
IGHD2-8*01                                                                                            18.0    0.68  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69-2*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TTCCTTTCCTCCCGGGGGGGGGGATTTTTGAC	ACTAATGGT	CATT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTCCTTTCCTCCCGGGGGGGGGGATTTTTGACACTAATGGTCATTACTACTCTGACTAC	VPFLPGGGIFDTNGHYYSDY	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	63	6	0	91.3
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	284	1	1	0	0	100
Total	N/A	N/A	283	259	24	0	91.5


Alignments

                                        <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  T  V  K  I  S  C  R  V  F  G  Y  T  F  A  D  Y 
                    Query_660      2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCTACAGTGAAGATATCCTGCAGGGTTTTTGGATATACCTTCGCTGACTAC  91
V  91.5% (259/283)  IGHV1-69-2*01  7    ........A........G................................A..C.......A.....C......C......A.C......  96
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  T  V  K  I  S  C  K  V  S  G  Y  T  F  T  D  Y 

                                        --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                         H  I  N  W  V  R  Q  A  P  G  E  G  L  E  W  M  G  L  V  D  P  E  D  S  G  T  I  Y  A  E 
                    Query_660      92   CACATAAACTGGGTGCGACAGGCCCCTGGAGAAGGGCTTGAATGGATGGGACTTGTTGATCCTGAAGATTCTGGAACAATATACGCAGAG  181
V  91.5% (259/283)  IGHV1-69-2*01  97   T....GC.........A.............A..........G...........................GG..A................  186
                                         Y  M  H  W  V  Q  Q  A  P  G  K  G  L  E  W  M  G  L  V  D  P  E  D  G  E  T  I  Y  A  E 

                                        -----------------------------------------FR3-IMGT-----------------------------------------
                                         K  F  Q  G  R  V  T  I  T  P  D  T  S  T  D  T  T  Y  M  E  L  S  S  P  R  S  E  D  T  A 
                    Query_660      182  AAGTTCCAGGGCAGAGTCACCATAACCCCGGACACGTCCACAGACACAACCTACATGGAGCTGAGCAGCCCGAGATCAGAGGACACGGCC  271
V  91.5% (259/283)  IGHV1-69-2*01  187  ...........................G..........T.........G.....................T......T............  276
                                         K  F  Q  G  R  V  T  I  T  A  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                        -----------><-------------------------CDR3-IMGT------------------------>                  
                                         V  F  Y  C  V  P  F  L  P  G  G  G  I  F  D  T  N  G  H  Y  Y  S  D  Y  W  G  Q  G  T  L 
                    Query_660      272  GTGTTTTACTGTGTTCCTTTCCTCCCGGGGGGGGGGATTTTTGACACTAATGGTCATTACTACTCTGACTACTGGGGCCAGGGAACCCTG  361
V  91.5% (259/283)  IGHV1-69-2*01  277  ....A........-----------------------------------------------------------------------------  289
                                         V  Y  Y  C                                                                               
D  100.0% (9/9)     IGHD2-8*01     11   ---------------------------------------------.........------------------------------------  19
J  97.9% (47/48)    IGHJ4*02       1    ----------------------------------------------------------......T.........................  32

                                                        
                                         V  T  V  S  S  
                    Query_660      362  GTCACCGTCTCCTCAG  377
J  97.9% (47/48)    IGHJ4*02       33   ................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_47515

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           355     3e-100
IGHD6-25*01                                                                                           18.0    0.56  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAG	ATAGCAGCG	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCCAGATAGCAGCGCCCTTTGATTAC	TRGQIAAPFDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_661    1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-33*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  S  D  G  N  N  K  Y  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_661    91   AGTGGGTGGCAGTTATTTGGTCTGATGGAAATAATAAATATTATGCAGCCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  95.6% (238/249)  IGHV3-33*01  137  ................A....A........G.........C.......A....................................T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  G  S  L  T  A  E  D  T  A  V  Y  Y  C  T  R  G  Q  I  A  A  P  F  
                    Query_661    181  AGAACACGCTGTATCTGCAAATGGGCAGCCTGACAGCCGAGGACACGGCTGTGTATTACTGTACGAGAGGCCAGATAGCAGCGCCCTTTG  270
V  95.6% (238/249)  IGHV3-33*01  227  .......................AA........G............................G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-25*01  5    --------------------------------------------------------------------------.........-------  13
J  95.5% (42/44)    IGHJ4*02     5    -------------------------------------------------------------------------------------.....  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_661    271  ATTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  309
J  95.5% (42/44)    IGHJ4*02     10   .C...................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_47514

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           341     5e-96
IGHD2-8*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGCGGGGGGTTTATCATGA	TAATGGTG	GCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGCGGGGGGTTTATCATGATAATGGTGGCCTTGACTTC	ARRRGVYHDNGGLDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  Y  Y  W  N  W  I  R  Q  T  P  G  K  G  P  E 
                    Query_662    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTACTACTGGAACTGGATCCGACAGACCCCAGGGAAGGGACCTGAG  90
V  94.7% (231/244)  IGHV4-59*08  49   .......................................A...............G.........G...C...............TG...  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  R  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_662    91   TGGATTGGGTATATCTATTCCAGGGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAAC  180
V  94.7% (231/244)  IGHV4-59*08  139  ...................A...T..................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  N  L  L  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  R  G  V  Y  H  D  N  G 
                    Query_662    181  CAGTTCTCCCTGAACCTGCTCTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGAGACGGCGGGGGGTTTATCATGATAATGGT  270
V  94.7% (231/244)  IGHV4-59*08  229  ..............G...AG.................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD2-8*01   13   -----------------------------------------------------------------------------------.......  19

                                      ----------->                                  
                                       G  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_662    271  GGCCTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTTTCCTCAG  316
D  100.0% (8/8)     IGHD2-8*01   20   .---------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    ----......A...........................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_47517

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  H
                    Query_663    1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATCA  90
V  92.4% (268/290)  IGHV5-51*01  6    ....................C........A.....................G.........A......C.........C.......GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  P
                    Query_663    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCCC  180
V  92.4% (268/290)  IGHV5-51*01  96   ...................................................G.......A.....G.......G....C.....C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  A
                    Query_663    181  GTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCGC  270
V  92.4% (268/290)  IGHV5-51*01  186  ...............G........C...................................G.......G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_663    271  CTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  350
V  92.4% (268/290)  IGHV5-51*01  276  .A.......C.....G....------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    -----------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_47516

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           355     3e-100
IGHD5-18*01                                                                                           14.1    7.9   
IGHJ4*02                                                                                              75.7    5e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	244	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  T  Y  F  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_664    1    ACCCTGTCCCTCACCTGCACTGTCTCGGGTGGCTCCATCAGCAGTAGTACTTACTTCTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  95.6% (238/249)  IGHV4-39*01  49   ..........................T......................G.....A.................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  N  Y  S  G  S  T  H  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_664    91   CTGGAGTGGATTGGGAATATCAATTATAGTGGGAGTACCCACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  95.6% (238/249)  IGHV4-39*01  139  ................G....T.............C...T..................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H 
                    Query_664    181  AAGAATCAGTTCTCCCTGAAGCTGAACTCTGTGACCGCCGCAGACACGGCTGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCAC  270
V  95.6% (238/249)  IGHV4-39*01  229  .....C...................G................................A..........---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------------.......-------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------.....T..  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_664    271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  97.6% (41/42)    IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_48869

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_665    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.9% (279/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_665    91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGACTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_665    181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  .......C.....................................C...........G......A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_665    271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.9% (279/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_665    361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_129874

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            411     4e-117
IGHD3-16*01                                                                                           12.2    34    
IGHJ3*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GCTTCC	TGGGGG	CCATGAGA	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATC	ARGFLGAMRDGLDI	273	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	109	5	0	95.6
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	271	8	0	97.1


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  D  T  W  N  W  
                    Query_666    1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGATACTTGGAACTGGA  90
V  97.1% (271/279)  IGHV6-1*01   26   ...........................................................................C.G............  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_666    91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGGAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  97.1% (271/279)  IGHV6-1*01   116  .....................................A....................................................  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  S  S  K  N  Q  F  S  L  Q  L  N  S  V  T  F  E  D  T  A  V  Y  F  
                    Query_666    181  GTCGAATAACCATTAACCCAGACTCATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTTTCGAGGACACGGCTGTGTATTTCT  270
V  97.1% (271/279)  IGHV6-1*01   206  .............C.........A.........................................CC....................A..  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------------CDR3-IMGT--------------->                                  
                                      C  A  R  G  F  L  G  A  M  R  D  G  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_666    271  GTGCAAGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  348
V  97.1% (271/279)  IGHV6-1*01   296  .........---------------------------------------------------------------------  304
                                      C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  17   ---------------......---------------------------------------------------------  22
J  95.9% (47/49)    IGHJ3*02     2    -----------------------------....C...T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_48860

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            422     2e-120
IGHD3-9*01                                                                                            18.0    0.66  
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-9*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGTCAT	TTACGATAT	ACGGGCCGGGT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTCATTTACGATATACGGGCCGGGTCTGGTTCGACCCC	ARGGHLRYTGRVWFDP	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  *  V  S  C  K  A  S  G  Y  T  F  T  D  Y
                    Query_667   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGTAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGACTA  90
V  96.6% (280/290)  IGHV1-2*04  6    ..................G..............................A....................................G...  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  K  Y  A  Q
                    Query_667   91   CTATGTGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAACCCTAACAGTGGTGGCACAAAGTATGCACA  180
V  96.6% (280/290)  IGHV1-2*04  96   ....A..............................................A.............................C........  185
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  N  R  L  R  S  D  D  T  A
                    Query_667   181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAACTGAACAGACTGAGATCTGACGACACGGC  270
V  96.6% (280/290)  IGHV1-2*04  186  ............................................................G....G...G....................  275
                                       K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                     ------------><-------------------CDR3-IMGT------------------>                             
                                       V  Y  Y  C  A  R  G  G  H  L  R  Y  T  G  R  V  W  F  D  P  W  G  Q  G  D  L  V  T  V  S
                    Query_667   271  CGTATATTACTGTGCGAGAGGGGGTCATTTACGATATACGGGCCGGGTCTGGTTCGACCCCTGGGGCCAGGGAGACCTGGTCACCGTCTC  360
V  96.6% (280/290)  IGHV1-2*04  276  ...G................----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                        
D  100.0% (9/9)     IGHD3-9*01  4    ----------------------------.........-----------------------------------------------------  12
J  95.7% (45/47)    IGHJ5*02    5    ------------------------------------------------.........................AC...............  46

                                          
                                       S  
                    Query_667   361  CTCAG  365
J  95.7% (45/47)    IGHJ5*02    47   .....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_48862

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           408     4e-116
IGHD2-8*02                                                                                            12.2    34    
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	A	GTACTG	ACACC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTACTGACACCGACTAT	ARSTDTDY	291	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	277	16	0	94.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  D  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  
                    Query_668    4    AGGTCCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCGGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCA  93
V  94.5% (277/293)  IGHV5-51*03  2    ....G............................A............G..................................G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  A  T  T  R  Y  
                    Query_668    94   ACTACTGGATCGGCTGGGTGCGCCAGAGGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACGCTACTACCAGATACA  183
V  94.5% (277/293)  IGHV5-51*03  92   G..........................T...............................A..............T..GA...........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_668    184  GCCCGTCGTTCGAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  94.5% (277/293)  IGHV5-51*03  182  .......C...C..............A................................C..............................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------CDR3-IMGT------>                                  
                                      S  A  M  Y  Y  C  A  R  S  T  D  T  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_668    274  GCGCCATGTATTATTGTGCGAGAAGTACTGACACCGACTATTGGGGCCAGGGCACCCTGGTCATCGTCTCCTCAG  348
V  94.5% (277/293)  IGHV5-51*03  272  C............C.........----------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                     
D  100.0% (6/6)     IGHD2-8*02   9    ------------------------......---------------------------------------------  14
J  92.5% (37/40)    IGHJ4*02     9    -----------------------------------.....C...........A..........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_48863

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           341     5e-96
IGHD6-13*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGATGGGGG	AGCAGCAGCTGGT	CTGCCCCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATCGATGGGGGAGCAGCAGCTGGTCTGCCCCTCACTTTGACTGC	TRDRWGSSSWSAPHFDC	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	22	8	0	73.3
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	237	19	0	92.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_669    1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCAACTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.6% (237/256)  IGHV3-49*04  47   ....................................C.....................................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  V  R  S  Y  T  H  G  G  T  T  A  Y  A  A  A  V  K  G  R  F  T  I  S  R  D  
                    Query_669    91   AGTGGGTTGGCTTCGTGAGAAGTTATACCCATGGTGGGACAACAGCTTACGCCGCGGCTGTGAAAGGCAGATTCACCATCTCAAGGGATG  180
V  92.6% (237/256)  IGHV3-49*04  137  .......A..T...A.T.....CA.AG.TT...............AA.........T............................A....  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  T  S  I  A  Y  L  E  M  D  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  D  R  W  G  S  
                    Query_669    181  ATTCCACAAGCATCGCCTATCTGGAAATGGACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGCACTAGAGATCGATGGGGGAGCA  270
V  92.6% (237/256)  IGHV3-49*04  227  ......A................C.....A.....................................T........--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (13/13)   IGHD6-13*01  7    --------------------------------------------------------------------------------------....  10

                                      DR3-IMGT-------------------->                                  
                                      S  S  W  S  A  P  H  F  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_669    271  GCAGCTGGTCTGCCCCTCACTTTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD6-13*01  11   .........------------------------------------------------------  19
J  97.8% (44/45)    IGHJ4*02     4    ------------------.........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_48864

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           336     1e-94
IGHD2-2*01                                                                                            19.9    0.15 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GGGCCCTGGCCC	GTAGTTCCAGCTG	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGGGCCCTGGCCCGTAGTTCCAGCTGCTTTGAATAC	ARGALARSSSCFEY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_670    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTGCCCACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGA  90
V  93.2% (232/249)  IGHV3-74*01  47   .....................................C......AG.T.........................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      M  Y  V  A  R  I  K  T  D  G  T  S  A  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_670    91   TGTATGTCGCACGAATTAAAACTGATGGGACTAGCGCAAATTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.2% (232/249)  IGHV3-74*01  137  ...GG...T....T.....T.G........G....A...GC.................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  F  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  G  A  L  A  R  S  S  
                    Query_670    181  AGAACACGCTGTTTCTGCAAATGAACAGTCTGGGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGGGGCCCTGGCCCGTAGTTCCA  270
V  93.2% (232/249)  IGHV3-74*01  227  ............A...................A....................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD2-2*01   12   ---------------------------------------------------------------------------------.....A...  20

                                      ------------->                                  
                                      S  C  F  E  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_670    271  GCTGCTTTGAATACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
D  92.3% (12/13)    IGHD2-2*01   21   ....--------------------------------------------  24
J  95.5% (42/44)    IGHJ4*02     5    ----......C................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_48865

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGCCGAAATC	GTATTACGACTTTTGGA	ATCCTTATTCTCGGCTCC	TTCGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCGAAATCGTATTACGACTTTTGGAATCCTTATTCTCGGCTCCTTCGGCCCC	ARGGRNRITTFGILILGSFGP	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_671    1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGATCATTATTGGAGCTGGATCCGCCAGTCTCCAGGGAAGGGGCTGGAA  90
V  93.1% (228/245)  IGHV4-34*01  49   ...........................................G.T.C..C..................C.C.................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_671    91   TGGATTGGGGAGATCAACCATAGTGGAAGCACCAACTACAACCCGTCTCTCAAGAGTCGAGTCACCATATCAGCGGACACGTCTAAGAAC  180
V  93.1% (228/245)  IGHV4-34*01  139  ...........A.....T.............................C.........................TA........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  K  L  I  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  G  R  N  R  I  T  T  F 
                    Query_671    181  CAGTTCTCCCTGAAGCTGATCTCTGTGACCGCCGCAGACACGGCTGTATATTTCTGTGCGAGAGGGGGCCGAAATCGTATTACGACTTTT  270
V  93.1% (228/245)  IGHV4-34*01  229  ...................G...............G...........G....A............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  94.1% (16/17)    IGHD3-3*01   1    ----------------------------------------------------------------------------.........T....  14

                                      MGT-------------------------->                                  
                                       G  I  L  I  L  G  S  F  G  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_671    271  GGAATCCTTATTCTCGGCTCCTTCGGCCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  334
D  94.1% (16/17)    IGHD3-3*01   15   ...-------------------------------------------------------------  17
J  95.3% (41/43)    IGHJ5*02     9    ---------------------....A....................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_48866

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           311     4e-87
IGHD6-13*01                                                                                           12.2    31   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGACACTGCAC	TATAGC	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGACACTGCACTATAGCCCCTTTGACTAC	ARGTLHYSPFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	223	24	0	90.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  D  N  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_672    1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGGTTCGACAACTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.3% (223/247)  IGHV3-33*01  47   ....................................CC...AGT.G.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  A  V  I  L  S  D  G  T  S  T  N  Y  I  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_672    91   ACTGGGTGGCAGTTATATTGTCTGATGGAACCAGTACAAATTATATAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  90.3% (223/247)  IGHV3-33*01  137  .G................G..A........GT.A..A.T.C...GC............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  T  L  H  Y  S  P  
                    Query_672    181  AGAATACGCTTTATCTGCAATTGAACAGCCTCAGAGTCGAGGACACGGCTGTCTATTACTGTGCGAGGGGGACACTGCACTATAGCCCCT  270
V  90.3% (223/247)  IGHV3-33*01  227  ....C.....G.........A..........G....C...............G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD6-13*01  4    --------------------------------------------------------------------------------......----  9
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_672    271  TTGACTACTGGGGCCAGGGAACCCTGGTTACCGTCTCGTCAG  312
J  95.5% (42/44)    IGHJ4*02     7    ............................C........C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_48867

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           350     8e-99
IGHD4-4*01                                                                                            14.1    8.3  
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD4-4*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCCCCC	CAGTAAC	CCCG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCCCCCAGTAACCCCGGATGCTTTGGATATC	ARPPPVTPDALDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  R  D  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_673    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTCAGGGACTATGGCATTCATTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-30*03  47   ......................................T....TAG.........G..C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  P  Y  D  G  S  N  Q  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_673    91   AGTGGGTGGCTTTTATACCATATGATGGAAGTAATCAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (236/248)  IGHV3-30*03  137  ..........AG.....T.................A......................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  P  P  V  T  P  D  
                    Query_673    181  AGAACACGCTGTATCTGCAAATGGACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGCGCGAGACCCCCCCCAGTAACCCCGGATG  270
V  95.2% (236/248)  IGHV3-30*03  227  .......................A.....................................T......----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD4-4*01   7    ---------------------------------------------------------------------------.......--------  13
J  98.0% (48/49)    IGHJ3*02     2    --------------------------------------------------------------------------------------....  5

                                      ---------->                                  
                                      A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_673    271  CTTTGGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  315
J  98.0% (48/49)    IGHJ3*02     6    ....T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_71547

Length=412
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            392     2e-111
IGHD4-17*01                                                                                           19.9    0.19  
IGHJ4*02                                                                                              37.2    2e-06 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD4-17*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CTGGGGGCGATTCAAGAGGGCCCCTCACTCCT	TGACAACGGTGGCTAC	CCATTCCTTTGTCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCTGGGGGCGATTCAAGAGGGCCCCTCACTCCTTGACAACGGTGGCTACCCATTCCTTTGTCCTC	VRGWGRFKRAPHSLTTVATHSFVL	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  E  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  I  N  Y
                    Query_674    1    GCAGCTGGTGCAGTCTGGAGCTGAGGAGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATACAGTTTCATCAATTA  90
V  93.1% (271/291)  IGHV1-8*01   6    ..................G.......T.......................................T..........CC....C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  F  A  Q
                    Query_674    91   TGATATCAATTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGCGGTAACACAGGCTTTGCACA  180
V  93.1% (271/291)  IGHV1-8*01   96   .........C...........................................................T.............A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  T  T  A  Y  M  E  L  I  N  L  R  F  Y  D  T  A
                    Query_674    181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAACCACAGCCTACATGGAACTGATCAACCTGAGATTTTACGACACGGC  270
V  93.1% (271/291)  IGHV1-8*01   186  ............................................G...............G....G..G........C.G.G........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------------CDR3-IMGT------------------------------>     
                                        V  Y  F  C  V  R  G  W  G  R  F  K  R  A  P  H  S  L  T  T  V  A  T  H  S  F  V  L  W  G
                    Query_674    271  CGTGTATTTTTGTGTGAGAGGCTGGGGGCGATTCAAGAGGGCCCCTCACTCCTTGACAACGGTGGCTACCCATTCCTTTGTCCTCTGGGG  360
V  93.1% (271/291)  IGHV1-8*01   276  ........AC....C......---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R  G                                                                     
D  87.5% (14/16)    IGHD4-17*01  1    -----------------------------------------------------....T......A....---------------------  16
J  85.3% (29/34)    IGHJ4*02     14   ------------------------------------------------------------------------------------......  19

                                                                  
                                        L  *  T  L  L  S  F  S  S 
                    Query_674    361  CCTGTGAACCCTGCTCTCCTTCTCCTCA  388
J  85.3% (29/34)    IGHJ4*02     20   ..A.G........G..A..G........  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40393728


Query= Query_170766

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           428     3e-122
IGHD3-10*01                                                                                           18.0    0.66  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGCCC	GTTCGGGGA	CTTTCCCAAAAAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGCCCGTTCGGGGACTTTCCCAAAAAAACTTTGACTAC	ARDLPVRGLSQKNFDY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	282	8	0	97.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_675    2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTAT  91
V  97.2% (282/290)  IGHV1-18*01  7    ..........................................................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_675    92   GGTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAG  181
V  97.2% (282/290)  IGHV1-18*01  97   ...A......................................................................................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  A  S  T  A  Y  M  E  L  R  S  L  R  S  A  D  P  A 
                    Query_675    182  AAACTCCAGGGCAGAGTCACCATGACCACAGACACTTCCGCGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGCCGACCCGGCC  271
V  97.2% (282/290)  IGHV1-18*01  187  ..G................................A...A.......................................A....A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  F  F  A  R  D  L  P  V  R  G  L  S  Q  K  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_675    272  GTGTATTTCTTTGCGAGAGATCTGCCCGTTCGGGGACTTTCCCAAAAAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  361
V  97.2% (282/290)  IGHV1-18*01  277  .......A..G.........----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD3-10*01  12   ---------------------------.........------------------------------------------------------  20
J  100.0% (45/45)   IGHJ4*02     4    -------------------------------------------------.........................................  44

                                          
                                       S  
                    Query_675    362  TCAG  365
J  100.0% (45/45)   IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_33683

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           327     9e-92
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  A  L  E 
                    Query_676    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGCACTGGAG  90
V  92.7% (227/245)  IGHV4-59*08  49   ...........................................G......................................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  F  Y  T  G  T  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_676    91   TGGATCGGGTCTATCTTTTACACTGGGACCACCAACTACGACCCCTCTCTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGAAC  180
V  92.7% (227/245)  IGHV4-59*08  139  .....T....A.....A.....G.....G..........A.......C....................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  G  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  H  R  A  A  A  G  P 
                    Query_676    181  CAGTTCTCCCTGAGAGGGACCTCTCTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATCCCCATAGAGCAGCAGCTGGCCCC  270
V  92.7% (227/245)  IGHV4-59*08  229  .............AGCT..G....G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD6-13*01  7    --------------------------------------------------------------------------............----  18
J  93.2% (41/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_676    271  TTTGACAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  313
J  93.2% (41/44)    IGHJ4*02     6    ......T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_33680

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           325     3e-91
IGHD2-15*01                                                                                           21.8    0.044
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTGAC	GATATTATAGTGGT	ATTAACTGCCCTTAACAGAGCGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTGACGATATTATAGTGGTATTAACTGCCCTTAACAGAGCGGGCTACTCCGGTCTGGACGTC	AREGDDIIVVLTALNRAGYSGLDV	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  R  R  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_677    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTCAGACGATATGAAATGAACTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-48*03  47   ....................................CC.....TA.T..........................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  N  S  N  G  S  V  T  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  G  
                    Query_677    91   AGTGGATTTCATACATTAATAGTAATGGAAGTGTCACACACTACGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGGCA  180
V  91.6% (229/250)  IGHV3-48*03  137  .....G............G.....G...T...AC..T.T................................A...............C..  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  K  S  L  Y  L  Q  M  S  N  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  G  D  D  I  I  V  
                    Query_677    181  AGAAGTCACTGTATCTGCAAATGAGTAACCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGCGAGAGAGGGTGACGATATTATAGTGG  270
V  91.6% (229/250)  IGHV3-48*03  227  ....C...................AC.G......................G...................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.9% (13/14)    IGHD2-15*01  3    -----------------------------------------------------------------------------......G......  15

                                      ----CDR3-IMGT------------------------------>                                 
                                      V  L  T  A  L  N  R  A  G  Y  S  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_677    271  TATTAACTGCCCTTAACAGAGCGGGCTACTCCGGTCTGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTCCTCA  347
D  92.9% (13/14)    IGHD2-15*01  16   .----------------------------------------------------------------------------  16
J  94.2% (49/52)    IGHJ6*02     11   -------------------------.....A....A................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_33681

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            439     2e-125
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	286	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_678    1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  98.3% (286/291)  IGHV1-2*04   6    ..................G.............AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_678    91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.3% (286/291)  IGHV1-2*04   96   ..........................................................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  G  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_678    181  GAAGTTTCAGGGCTGGGTCACCATGACCGGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  98.3% (286/291)  IGHV1-2*04   186  ............................A.............................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W   A  
                    Query_678    271  CGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGGG-CCA  359
V  98.3% (286/291)  IGHV1-2*04   276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  96.5% (55/57)    IGHJ6*02     6    ----------------------------------------------------------....A.......................G...  37

                                                               
                                      K  G  P  R  S  P  S  P   
                    Query_678    360  AGGGACCACGGTCACCGTCTCCTCA  384
J  96.5% (55/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_33686

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           10.3    131   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_679    2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  95.2% (276/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  F  A  Q 
                    Query_679    92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTTTGCACAG  181
V  95.2% (276/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_679    182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_679    272  ATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  95.2% (276/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_33687

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           269     2e-74
IGHD3-10*02                                                                                           21.8    0.040
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GTATCACTATGTTC	ACGGCGTAC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGTATCACTATGTTCACGGCGTACTTCGACCCC	ARGITMFTAYFDP	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	13	8	0	61.9
FR3-IMGT	126	239	114	95	19	0	83.3
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	209	37	0	85


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  V  S  G  F  T  V  S  R  T  Y  M  S  W  V  R  Q  T  P  E  K  G  L  
                    Query_680    1    GGTCCCTGAGACTCTCCTGTGTAGTCTCTGGGTTCACCGTCAGTCGCACCTACATGAGCTGGGTCCGCCAGACTCCAGAAAAGGGGCTGG  90
V  85.0% (209/246)  IGHV3-53*01  47   .....................C..C...................A...A......................G......GG..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  H  Y  V  G  G  Q  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  M  D  D  S  K  
                    Query_680    91   AGTGGGTCTCACTCCATTACGTCGGTGGTCAGACATATTACGCAGAGTCAGTGAAGGGCCGATTCACCATCTCCATGGACGACTCCAAGA  180
V  85.0% (209/246)  IGHV3-53*01  137  ...........G.TAT...TAG.......AGC.....C........C..C.........................GA...A.T.......  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------CDR3-IMGT-------
                                      N  I  L  Y  L  Q  L  N  S  V  T  V  D  D  T  A  V  Y  Y  C  A  R  G  I  T  M  F  T  A  Y  
                    Query_680    181  ACATTCTGTATCTTCAACTCAATAGTGTGACAGTCGACGACACGGCCGTCTATTATTGTGCGCGAGGTATCACTATGTTCACGGCGTACT  270
V  85.0% (209/246)  IGHV3-53*01  227  ...CG............A.G..C..CC...G..C...G...........G.....C......A...------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  92.9% (13/14)    IGHD3-10*02  1    ------------------------------------------------------------------....T.........----------  14
J  97.7% (42/43)    IGHJ5*02     9    -----------------------------------------------------------------------------------------.  9

                                      ------->                                  
                                      F  D  P  W  G  P  G  T  L  V  T  V  S  S  
                    Query_680    271  TCGACCCCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.7% (42/43)    IGHJ5*02     10   ...............A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_33684

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           402     3e-114
IGHD6-25*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGAGGCTA	ATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGAGGCTAATACGGGGCACTACTTTGACTAC	ARRIAEANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_681    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCTTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  94.5% (273/289)  IGHV5-51*03  6    .........................................................C...................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_681    91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  94.5% (273/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  R  S  I  T  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_681    181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAGGTCCATCACGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  94.5% (273/289)  IGHV5-51*03  186  ...............G...................A........GC...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  E  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_681    271  CGTCTATTACTGTGCGAGACGAATAGCAGAGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  94.5% (273/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  92.3% (12/13)    IGHD6-25*01  5    ----------------------.......C.....-------------------------------------------------------  17
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_681    361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_33685

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           349     3e-98
IGHD3-16*01                                                                                           18.0    0.64 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	278	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	277	114	95	13	6	83.3
CDR3-IMGT (germline)	278	283	6	6	0	0	100
Total	N/A	N/A	289	258	25	6	89.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P  R  Y
                    Query_682    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCCGTTA  90
V  89.3% (258/289)  IGHV5-51*03  6    .......................................................T.....A....T..........GC..TA..A.C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_682    91   TTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGTCC  180
V  89.3% (258/289)  IGHV5-51*03  96   C........C.......................................................G.....................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D  T  A
                    Query_682    181  GGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACACTGC  264
V  89.3% (258/289)  IGHV5-51*03  186  .T.....C.A...................C...C........CAGCACC.C...............C..C.................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_682    265  CATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  353
V  89.3% (258/289)  IGHV5-51*03  276  ...G........T......----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD3-16*01  18   --------------------........T...---------------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    ---------------------------------------......T......G.................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_33688

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           344     6e-97
IGHD3-10*01                                                                                           10.3    125  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAAGACCCCGATCAA	TATGG	CACCTCCGAATT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAAGACCCCGATCAATATGGCACCTCCGAATTCTACTTTGACTAC	AKDKDPDQYGTSEFYFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_683    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATACCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-30*18  47   ..........................................G..G.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  S  Y  D  G  S  Q  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_683    91   AATGGGTGGCAGCTATATCATATGATGGAAGTCAGAAGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCG  180
V  94.0% (235/250)  IGHV3-30*18  137  .G..........T...................A.T..A...............................................T...A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      E  N  T  V  D  L  Q  V  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  K  D  P  D  Q  Y  
                    Query_683    181  AGAACACGGTGGATCTGCAAGTGAACAGCCTGAGAGCCGAGGACACAGCTGTGTATTACTGTGCGAAAGATAAAGACCCCGATCAATATG  270
V  94.0% (235/250)  IGHV3-30*18  227  ........C..T........A................T........G.......................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD3-10*01  8    --------------------------------------------------------------------------------------....  11

                                      IMGT--------------------->                                  
                                      G  T  S  E  F  Y  F  D  Y  W  G  Q  G  T  P  V  A  V  S  S  
                    Query_683    271  GCACCTCCGAATTCTACTTTGACTACTGGGGCCAGGGAACCCCGGTCGCCGTCTCCTCAG  330
D  100.0% (5/5)     IGHD3-10*01  12   .-----------------------------------------------------------  12
J  95.7% (45/47)    IGHJ4*02     2    -------------.............................T....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_33689

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            333     1e-93
IGHD3-3*02                                                                                            12.2    31   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTT	GCATTT	CGATCTCCCACGAGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGCATTTCGATCTCCCACGAGGCATGGACGTC	ARLHFDLPRGMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  T  Y  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_684   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGGGGCTCCATCACCAGTACTTACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  93.5% (229/245)  IGHV4-4*01  49   ..................G....C.....T..........G.....G.A.........G...........................G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  S  G  S  P  H  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_684   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCCCCCACTACAGTCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  93.5% (229/245)  IGHV4-4*01  139  .................................A..A......AC.............................................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                      N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  W  C  A  R  L  H  F  D  L  P  R  G 
                    Query_684   181  AACCAGTTCTCCCTGAAGTTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTGGTGTGCGAGGTTGCATTTCGATCTCCCACGAGGC  270
V  93.5% (229/245)  IGHV4-4*01  229  ..................C....C.............................T..C........-------------------------  293
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  100.0% (6/6)     IGHD3-3*02  7    --------------------------------------------------------------------......----------------  12

                                     -------->                                 
                                      M  D  V  W  G  Q  G  T  T  A  I  V  S  S 
                    Query_684   271  ATGGACGTCTGGGGCCAAGGGACCACGGCCATCGTCTCCTCA  312
J  95.2% (40/42)    IGHJ6*02    21   ............................T..C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_1432

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         434     4e-124
IGHD2-21*02                                                                                           50.7    1e-10 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTGG	GCATATTGTGGTGGTGACTGCTATTC	AC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTGGGCATATTGTGGTGGTGACTGCTATTCACTTGACTAC	ARWAYCGGDCYSLDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	283	5	0	98.3


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_685      1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGCGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTA  90
V  98.3% (283/288)  IGHV5-10-1*01  6    .................................................A....................................G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  Q  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  C  S  P
                    Query_685      91   CTGGATCAGCTGGGTGCGCCAGATGCCCGGGCAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAACTGCAGCCC  180
V  98.3% (283/288)  IGHV5-10-1*01  96   ...............................A...................................................A......  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_685      181  GTCCTTCCAAGGCCACGTCACCGTCTCAGCTGACAAGTCCATCAGCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (283/288)  IGHV5-10-1*01  186  ......................A...................................................................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          M  Y  Y  C  A  R  W  A  Y  C  G  G  D  C  Y  S  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_685      271  CATGTATTACTGTGCGAGGTGGGCATATTGTGGTGGTGACTGCTATTCACTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  98.3% (283/288)  IGHV5-10-1*01  276  ..................------------------------------------------------------------------------  293
                                          M  Y  Y  C  A                                                                           
D  100.0% (26/26)   IGHD2-21*02    2    ----------------------..........................------------------------------------------  27
J  100.0% (42/42)   IGHJ4*02       7    --------------------------------------------------........................................  46

                                          
                                          
                    Query_685      361  AG  362
J  100.0% (42/42)   IGHJ4*02       47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_84490

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-16*02                                                                                           12.2    32   
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGT	TCGTTA	CCCAATCTTGGCTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTTCGTTACCCAATCTTGGCTCCTACTACGGTATGGACGTC	ARDRSLPNLGSYYGMDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  M  G  L  E 
                    Query_686    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTTACTACTGGAGCTGGATCCGGCAGCCCCCGGGGATGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...............................G.........T................................A....A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  Y  S  G  T  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_686    91   TGGATTGGGCATATCTATTACAGTGGGACCACCAGTTACAATCCTTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAT  180
V  93.5% (229/245)  IGHV4-59*01  139  .........T..................G.....AC.....C..C...........................G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  S  L  P  N  L  G  S 
                    Query_686    181  CAGTTCTCCCTGAAGCTGAATTCCGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATCGTTCGTTACCCAATCTTGGCTCC  270
V  93.5% (229/245)  IGHV4-59*01  229  ...................GC..T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*02  28   ---------------------------------------------------------------------......---------------  33
J  96.2% (50/52)    IGHJ6*02     11   -----------------------------------------------------------------------------------------.  11

                                      ----------------->                                 
                                       Y  Y  G  M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_686    271  TACTACGGTATGGACGTCTGGGGCCAAGGGGCCACCGTCACCGTCTCCTCA  321
J  96.2% (50/52)    IGHJ6*02     12   ..............................A....G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_248427

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         343     2e-96
IGHD3-10*01                                                                                           10.3    115  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GA	GGGGA	CAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAGGGGACATTATGGACGTC	ARGGDIMDV	246	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  I  S  S  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_687      4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGCC  93
V  94.0% (234/249)  IGHV4-30-2*01  50   .....TCC...A................................G.............................................  139
                                           L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  H  H  S  G  L  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  R  S  
                    Query_687      94   TGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACAGGTCCA  183
V  94.0% (234/249)  IGHV4-30-2*01  140  .............G......T...........AG..C.T...A......................G........................  229
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  

                                        -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                        K  N  Q  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  D  I  M  D  V  
                    Query_687      184  AGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAGGGGACATTATGGACGTCT  273
V  94.0% (234/249)  IGHV4-30-2*01  230  ..........C.......A..................................................---------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01    16   -----------------------------------------------------------------------.....--------------  20
J  100.0% (43/43)   IGHJ6*02       20   -------------------------------------------------------------------------------...........  30

                                                                        
                                        W  G  Q  G  T  T  V  T  V  S  S 
                    Query_687      274  GGGGCCAAGGGACCACGGTCACCGTCTCCTCA  305
J  100.0% (43/43)   IGHJ6*02       31   ................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_202420

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           276     3e-76
IGHD3-10*01                                                                                           12.2    32   
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGC	AGTTAATAT	GAACGGACGCTACG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGCAGTTAATATGAACGGACGCTACGACTGGTTCGACCCC	ARDAVNMNGRYDWFDP	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	213	37	0	85.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  Q  R  L  S  C  T  A  S  G  F  N  F  N  I  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_688    1    GGTCCCAGAGACTCTCCTGTACAGCCTCTGGATTCAATTTTAACATTTATGCCATGAACTGGGTCCGCCAGGCACCAGGGAAGGGGCTGG  90
V  85.2% (213/250)  IGHV3-23*01  47   ......T.............G...............CC....G..GC..........G...............T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  G  G  G  P  D  D  I  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_688    91   AGTGGGTCTCAGCTATTGGTGGCGGTCCTGATGACATCTTCTACGCGGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  85.2% (213/250)  IGHV3-23*01  137  .................A....TA..GG..G.AG..CA.A......A...........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  V  Y  L  Q  I  N  S  L  R  Y  E  D  T  A  I  Y  F  C  A  R  D  A  V  N  M  N  G  
                    Query_688    181  AGAGTACAGTTTACTTGCAAATTAACAGCCTGAGGTACGAAGACACGGCCATTTATTTCTGTGCGAGAGATGCAGTTAATATGAACGGAC  270
V  85.2% (213/250)  IGHV3-23*01  227  ...AC..GC.G..TC.......G...........AGC...G.........G.A....A........A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.9% (8/9)      IGHD3-10*01  20   -------------------------------------------------------------------------.....T...--------  28

                                      T------------------>                                  
                                      R  Y  D  W  F  D  P  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_688    271  GCTACGACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCTCTGTCTCCTCAG  324
J  93.8% (45/48)    IGHJ5*02     4    ------.........................A.........A.C..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_248425

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           302     3e-84
IGHD3-22*01                                                                                           18.0    0.61 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGAAA	TATGACTATGAT	CTTGGAGACGTGGGTCTCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGAAATATGACTATGATCTTGGAGACGTGGGTCTCCACAACTTTGACTCC	ARAPKYDYDLGDVGLHNFDS	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	218	25	0	89.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  S  G  G  S  M  S  N  Y  F  W  S  W  I  R  Q  P  P  G  K  R  L  E  
                    Query_689    4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATGAGTAATTACTTCTGGAGCTGGATTCGGCAGCCCCCAGGGAAGAGACTGGAGT  93
V  89.7% (218/243)  IGHV4-59*01  50   .....TCC...A.....A...................C....G.....A............C..................G.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  T  G  Y  I  Y  Y  S  G  L  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  I  D  T  P  K  N  
                    Query_689    94   GGACTGGGTATATCTATTATAGTGGACTCACCAAGTACAACCCGTCCCTCAAGAGTCGAGTCAGCATATCAATTGACACGCCCAAGAACC  183
V  89.7% (218/243)  IGHV4-59*01  140  ...T...............C.....GAG......C........C...................C.......G.A......T.........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      H  F  S  L  K  V  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  A  P  K  Y  D  Y  D  L  G  
                    Query_689    184  ACTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCATTTATTACTGTGCGAGAGCCCCGAAATATGACTATGATCTTGGAG  273
V  89.7% (218/243)  IGHV4-59*01  230  .G............C.............................G.G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  91.7% (11/12)    IGHD3-22*01  2    -----------------------------------------------------------------------...T........-------  13

                                      T------------------------>                                  
                                      D  V  G  L  H  N  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_689    274  ACGTGGGTCTCCACAACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
J  97.8% (44/45)    IGHJ4*02     4    ---------------.........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_248424

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD6-25*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTC	ARQSSAGRTKYGMDV	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	70	4	0	94.6
CDR1-IMGT	77	100	24	18	6	0	75
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	279	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  S  S  G  Y  D  F  L  
                    Query_690    3    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGAGTTCTGGATACGACTTTCTCG  92
V  94.6% (279/295)  IGHV5-51*01  2    ..G...............................A.....C...........................G...........AG....AC.A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_690    93   ACTACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACA  182
V  94.6% (279/295)  IGHV5-51*01  92   G...........G.......................................................................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_690    183  GCCCGTCATTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGAACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  94.6% (279/295)  IGHV5-51*01  182  .......C.........................................C........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  T  K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  M  V  T  V  
                    Query_690    273  CCACCAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCT  362
V  94.6% (279/295)  IGHV5-51*01  272  ..G...T..................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD6-25*01  7    --------------------------.......---------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -----------------------------------------------...............................C...........  57

                                           
                                      S  S 
                    Query_690    363  CCTCA  367
J  97.9% (47/48)    IGHJ6*02     58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_161188

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_691    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ........................................G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_691    91   TGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ........G...A..T...............................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y 
                    Query_691    181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............C....C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_691    271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_161189

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD3-22*01                                                                                           16.1    2.3   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCAC	ARAPPFDYDLDVRGIHNFDH	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	236	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_692    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (236/244)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_692    91   TGGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAGC  180
V  96.7% (236/244)  IGHV4-59*01  139  ..........A.................G.............................................A.............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D 
                    Query_692    181  CAGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGAC  270
V  96.7% (236/244)  IGHV4-59*01  229  ..................AG...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-22*01  6    ----------------------------------------------------------------------------........------  13

                                      GT------------------------>                                  
                                       V  R  G  I  H  N  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_692    271  GTAAGGGGAATCCACAACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  97.8% (44/45)    IGHJ4*02     4    ----------------........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_248421

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TTGGGAT	TATGCTTCGGGGACTTATTAT	TCCCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATTGGGATTATGCTTCGGGGACTTATTATTCCCTCTTTGACTAT	AKDWDYASGTYYSLFDY	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	49	2	0	96.1
CDR2-IMGT	100	123	24	22	2	0	91.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	233	223	10	0	95.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  N  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 
                    Query_693    13   TGTGCAGCCTCTGGATTCACCTTTAACACCTATGCCATGAGCTGGGTCCGCCAGGCTCCTGGGAAGGGGCTGGAGTGGGTCTCAGGTATT  102
V  95.7% (223/233)  IGHV3-23*01  64   .........................G..G..............................A.........................C....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       V  G  S  G  G  S  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  K  N  T  L  Y  L 
                    Query_693    103  GTTGGTAGTGGTGGTAGCACATTCTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACATTTCCAAGAACACGCTGTATCTG  192
V  95.7% (223/233)  IGHV3-23*01  154  AG....................A........................G...................A......................  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------------CDR3-IMGT---------------
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  W  D  Y  A  S  G  T  Y  Y  S  L  F 
                    Query_693    193  CAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGGATTGGGATTATGCTTCGGGGACTTATTATTCCCTCTTT  282
V  95.7% (223/233)  IGHV3-23*01  244  ..................................................A..-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  90.5% (19/21)    IGHD3-10*01  8    ------------------------------------------------------------....G........G.......---------  28
J  97.7% (43/44)    IGHJ4*02     5    --------------------------------------------------------------------------------------....  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_693    283  GACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  97.7% (43/44)    IGHJ4*02     9    .....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_202429

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            363     1e-102
IGHD4-17*01                                                                                           14.1    8.2   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAAGG	CGGTTACTAC	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAAGGCGGTTACTACCCCTTTGACTAC	ARDKGGYYPFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  T  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_694    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGGTACCTTTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-7*03   47   .........................................A...G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_694    91   AGTGGGTGGCCAACATAAACCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (241/250)  IGHV3-7*03   137  ...................G......................................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  V  Y  L  Q  M  N  G  L  R  G  E  D  T  A  L  Y  Y  C  A  R  D  K  G  G  Y  Y  P  
                    Query_694    181  AAAACTCAGTGTATCTGCAAATGAACGGCCTGAGAGGCGAGGACACGGCCCTGTATTACTGTGCGAGAGATAAAGGCGGTTACTACCCCT  270
V  96.4% (241/250)  IGHV3-7*03   227  .G......C.................A.........C.............G...................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD4-17*01  7    ----------------------------------------------------------------------------....G.....----  16
J  97.4% (38/39)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                             
                                      F  D  Y  W  G  Q  G  T  P  V  T  V  S
                    Query_694    271  TTGACTACTGGGGCCAGGGAACCCCGGTCACCGTCTC  307
J  97.4% (38/39)    IGHJ4*02     7    ........................T............  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_161185

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           341     5e-96
IGHD1-26*01                                                                                           10.3    117  
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TAGTG	TGTCCGCTCGAGTTTTA	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATAGTGTGTCCGCTCGAGTTTTAGACGTC	ARDSVSARVLDV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  D  A  S  G  F  T  F  S  S  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_695    1    GGTCCCTGAGACTCTCCTGTGACGCCTCTGGATTCACCTTTAGTAGCCACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-74*01  47   .....................CA.................C......T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  S  T  D  G  S  R  T  T  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  T  
                    Query_695    91   TGTGGGTCTCACGTATTAGTACTGATGGGAGTCGCACAACCTACGTGGACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.6% (234/250)  IGHV3-74*01  137  ..................A..G..........A......G.....C..........A.............................G...  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  R  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  V  S  A  R  V  
                    Query_695    181  AGAACAGATTGTATCTGCAATTGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGAGATAGTGTGTCCGCTCGAGTTT  270
V  93.6% (234/250)  IGHV3-74*01  227  ......CGC...........A...............................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  5    ----------------------------------------------------------------------.....---------------  9

                                      ------->                                 
                                      L  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_695    271  TAGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  311
J  97.4% (38/39)    IGHJ6*02     24   --............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_161187

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            439     2e-125
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	286	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_696    1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  98.3% (286/291)  IGHV1-2*04   6    ..................G.............AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  G  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_696    91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGGGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.3% (286/291)  IGHV1-2*04   96   .........................................A................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_696    181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  98.3% (286/291)  IGHV1-2*04   186  ..........................................................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W  G  Q
                    Query_696    271  CGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGGGGCCA  360
V  98.3% (286/291)  IGHV1-2*04   276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------------------....A...........................  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_696    361  AGGGACCACGGTCACCGTCTCCTCA  385
J  98.2% (56/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_161180

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD1-1*01                                                                                            14.1    8.3  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTACCCTA	AACTGGGACG	GACCTTCTGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTACCCTAAACTGGGACGGACCTTCTGCTTTTGACCAC	ARLTLNWDGPSAFDH	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  D  P  M  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_697    1    ACCCTGTCCCTCACCTGCGCTGTCTCCGGTGACCCCATGACTAGTTATTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  91.8% (223/243)  IGHV4-59*01  49   ..................A.......T....G.T....C.G......C........C........................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  L  S  I  D  T  S  K  N 
                    Query_697    91   TGGATTGGATATATCTACTACAGTGGGAGCACCAACTACAACCCTTCCCTCAGGAGTCGAGTCACCTTATCGATAGACACGTCCAAGAAC  180
V  91.8% (223/243)  IGHV4-59*01  139  ........G........T..........................C.......A.............A....AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       H  F  S  L  S  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  T  L  N  W  D  G  P  S 
                    Query_697    181  CACTTCTCCCTGAGCCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGACTTACCCTAAACTGGGACGGACCTTCT  270
V  91.8% (223/243)  IGHV4-59*01  229  ..G..........AG................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD1-1*01   6    ------------------------------------------------------------------------......A...--------  15

                                      ----------->                                  
                                       A  F  D  H  W  G  R  G  T  L  V  A  V  S  S  
                    Query_697    271  GCTTTTGACCACTGGGGCCGGGGAACCCTGGTCGCCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---......T.........A.............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_161181

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         436     1e-124
IGHD1-7*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCGTCC	GTATGACTGGAACTAC	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCGTCCGTATGACTGGAACTACCCCTTTGACTAC	ARHRPYDWNYPFDY	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	75	72	71	1	0	98.6
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	111	3	0	97.4
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	291	285	6	0	97.9


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  E  Y  S  F  T  S 
                    Query_698      4    GTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGAATCTCCTGTAAGGGTTCTGAATACAGCTTTACCAGC  93
V  97.9% (285/291)  IGHV5-10-1*01  4    .....................................................G...................G................  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 
                    Query_698      94   TACTGGATCAGCTGGGTGCGTCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAACTACAGC  183
V  97.9% (285/291)  IGHV5-10-1*01  94   ....................C.....................................................................  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  Q  G  H  V  T  I  S  T  D  K  S  I  N  T  A  Y  V  Q  W  S  S  L  K  A  S  D  T 
                    Query_698      184  CCGTCCTTCCAAGGCCACGTCACCATCTCAACTGACAAGTCCATCAACACTGCCTACGTGCAGTGGAGCAGCCTGAAGGCCTCGGACACC  273
V  97.9% (285/291)  IGHV5-10-1*01  184  ..............................G...............G..........C................................  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><----------------CDR3-IMGT--------------->                                 
                                         A  M  Y  Y  C  A  R  H  R  P  Y  D  W  N  Y  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_698      274  GCCATGTATTACTGTGCGAGACATCGTCCGTATGACTGGAACTACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  363
V  97.9% (285/291)  IGHV5-10-1*01  274  .....................---------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                      
D  93.8% (15/16)    IGHD1-7*01     2    -----------------------------....A...........---------------------------------------------  17
J  100.0% (44/44)   IGHJ4*02       5    -----------------------------------------------...........................................  47

                                         
                                         
                    Query_698      364  G  364
J  100.0% (44/44)   IGHJ4*02       48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_248429

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	ATTTCTTAGGG	GCTCGTC	AGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACATTTCTTAGGGGCTCGTCAGGCTTTCACTAC	TFLRGSSGFHY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	101	13	0	88.6
CDR3-IMGT (germline)	249	250	2	2	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  D  L  D  W  V  R  Q  A  S  G  K  G  L  
                    Query_699    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGATTTGGACTGGGTCCGCCAGGCTTCCGGGAAAGGCCTGG  90
V  90.8% (227/250)  IGHV3-73*01  47   .........A.........................................C.A..C............................G....  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  M  R  T  K  D  D  N  Y  A  T  L  Y  A  A  S  V  R  G  R  F  T  I  S  R  D  
                    Query_699    91   AGTGGGTTGGCCGTATGAGAACCAAAGATGACAATTACGCGACACTATATGCTGCGTCGGTGAGAGGCAGGTTCACCATCTCCAGAGATG  180
V  90.8% (227/250)  IGHV3-73*01  137  ................T....G.....C.A...G..........GC.................A..........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  N  M  A  Y  L  Q  M  S  G  L  D  T  E  D  T  A  L  Y  F  C  T  F  L  R  G  S  S  
                    Query_699    181  ATTCAAAGAACATGGCTTATCTGCAAATGAGCGGCCTGGACACCGAGGACACGGCCCTTTACTTCTGTACATTTCTTAGGGGCTCGTCAG  270
V  90.8% (227/250)  IGHV3-73*01  227  ............C...G.............A.A.....A.A...............G.G..T.A......--------------------  296
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------.......--  17

                                      ---------->                                  
                                      G  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_699    271  GCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (43/44)    IGHJ4*02     5    -....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_161183

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD6-13*01                                                                                           12.2    32   
IGHJ5*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCGCCGACG	GCAGCA	CCCCCTTCTTCTTCCCCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCGCCGACGGCAGCACCCCCTTCTTCTTCCCCGACTGGTTCGACCCC	ARTADGSTPFFFPDWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  I  S  G  G  S  I  N  K  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_700    1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGGCTCCATCAATAAATACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAG  90
V  94.7% (230/243)  IGHV4-59*01  49   .....................G..................G..GT...........C.............................G...  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  R  S  K  N 
                    Query_700    91   TGGATAGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACAGGTCCAAGAAC  180
V  94.7% (230/243)  IGHV4-59*01  139  .....T..G...............................................................G......C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  V  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  A  D  G  S  T  P  F  F 
                    Query_700    181  CAGGTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAACCGCCGACGGCAGCACCCCCTTCTTC  270
V  94.7% (230/243)  IGHV4-59*01  229  ...T.........A.................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-13*01  8    -------------------------------------------------------------------------......-----------  13

                                      -------------------->                                  
                                       F  P  D  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_700    271  TTCCCCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ5*02     4    -------................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_321072

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           353     9e-100
IGHD3-16*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAATC	TTGGGGGAG	CCGACCAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAATCTTGGGGGAGCCGACCAGATTGACTAC	ARVNLGGADQIDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  H  Y  W  S  W  M  R  Q  P  P  G  K  G 
                    Query_701    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGGTAGTCACTACTGGAGCTGGATGCGGCAGCCCCCAGGGAAGGGA  90
V  95.2% (238/250)  IGHV4-61*01  49   .........................................C.........T................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  N  Y  E  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_701    91   CTGGAGTGGATTGGGAATATCTATTATAGTGGGAGCACCAACTACGAACCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCC  180
V  95.2% (238/250)  IGHV4-61*01  139  ...............T..........C..................A.C..............................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  N  S  L  T  A  A  D  T  A  V  Y  F  C  A  R  V  N  L  G  G  A  D 
                    Query_701    181  AAGAACCAGTTCTCCCTGAAACTGAACTCTTTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGTTAATCTTGGGGGAGCCGAC  270
V  95.2% (238/250)  IGHV4-61*01  229  ....................G....G....G...........................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  16   ----------------------------------------------------------------------------.........-----  24

                                      ----------->                                  
                                       Q  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_701    271  CAGATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (42/42)   IGHJ4*02     7    ----..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_23307

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	281	14	0	95.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  
                    Query_702    2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTTCCA  91
V  95.3% (281/295)  IGHV5-51*01  2    ....G.....G.......................................................................C...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  
                    Query_702    92   CTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACA  181
V  95.3% (281/295)  IGHV5-51*01  92   GC..C.......G.................................................T.................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_702    182  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACC  271
V  95.3% (281/295)  IGHV5-51*01  182  ...........C.....................C.......................................................A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      P  A  I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  
                    Query_702    272  CCGCCATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  361
V  95.3% (281/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  85.7% (12/14)    IGHD1-26*01  4    ---------------------------------...G....A.....-------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------------......TA................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_702    362  CGGTCACCGTCTCGTCA  378
J  94.7% (54/57)    IGHJ6*02     46   .............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_139268

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           319     2e-89
IGHD2-8*01                                                                                            21.8    0.041
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-8*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCAA	AGTTAGGCGGACC	ATATTGTACTA	CTATAAATTGTAAT	CCCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGTTAGGCGGACCATATTGTACTACTATAAATTGTAATCCC	AKLGGPYCTTINCNP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	225	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  S  Y  W  M  H  W  A  R  Q  D  P  G  K  G  L  
                    Query_703    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCGCCTTCAGTTCCTACTGGATGCACTGGGCCCGCCAAGATCCAGGGAAGGGGCTGG  90
V  91.5% (225/246)  IGHV3-74*01  47   ...............................A...A........AG.................T........C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  P  D  G  R  V  Q  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_703    91   TGTGGGTCTCGCGTATTAATCCTGATGGACGTGTCCAAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.5% (225/246)  IGHV3-74*01  137  ..........A.........AG......GA..AG.AC..G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  M  Y  L  Q  M  N  G  L  R  A  E  D  T  S  V  Y  Y  C  A  K  L  G  G  P  Y  C  T  
                    Query_703    181  AGAACACGATGTATCTGCAAATGAATGGTCTGAGAGCCGAGGACACGTCTGTGTACTACTGTGCAAAGTTAGGCGGACCATATTGTACTA  270
V  91.5% (225/246)  IGHV3-74*01  227  ........C................CA....................G.......T..........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD2-8*01   4    -------------------------------------------------------------------------------...........  14

                                      ---------------->                                  
                                      T  I  N  C  N  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_703    271  CTATAAATTGTAATCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (37/37)   IGHJ5*02     15   --------------.....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_166134

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           291     6e-81
IGHD3-3*01                                                                                            14.1    8.9  
IGHJ1*01                                                                                              14.1    20   


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ1*01	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TG	GATTCTTGGA	CCTTGGTGACGGTCCCTTCCGCCAGATTGGTGTTTTTGACAAGTGTGGC	CCAGG	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  T  S  G  F  T  F  D  T  Y  G  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_704    1    GGTCCCTGAGACTCTCCTGTACAACGTCTGGATTCACCTTCGACACCTATGGCATGTATTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  87.2% (218/250)  IGHV3-33*01  47   ....................G..G.................AGT.G..........C.C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  W  H  D  G  S  Q  R  F  Y  G  D  S  V  K  G  R  F  S  V  S  R  D  N  S  
                    Query_704    91   AGTGGGTGGCAAGTATTTGGCATGATGGAAGCCAGAGGTTCTATGGAGACTCTGTGAAGGGCCGATTCTCCGTCTCCAGAGACAACTCCA  180
V  87.2% (218/250)  IGHV3-33*01  137  ...........GT...A...T..........TA.T.AA.A.....C......C...............A..A.............T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT---------------------------------------------------->                            
                                      K  N  T  L  Y  L  Q  M  G  R  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  F  L  D  L  G  
                    Query_704    181  AGAACACATTGTACTTGCAAATGGGCAGACTTAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGATGGATTCTTGGACCTTGGTG  270
V  87.2% (218/250)  IGHV3-33*01  227  .......GC....TC........AA...C..G....................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-3*01   8    ------------------------------------------------------------------------....T.....--------  17

                                                                                      
                                      D  G  P  F  R  Q  I  G  V  F  D  K  C  G  P  G  
                    Query_704    271  ACGGTCCCTTCCGCCAGATTGGTGTTTTTGACAAGTGTGGCCCAGGGC  318
J  100.0% (7/7)     IGHJ1*01     24   -----------------------------------------.......  30


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_125004

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	216	29	0	88.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_705    1    ACCCTGTCCCTCACCTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  88.2% (216/245)  IGHV4-34*01  49   .......................CTA..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_705    91   TGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAA  180
V  88.2% (216/245)  IGHV4-34*01  139  ................A............CA.C.AC......C..T......A...............A....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W 
                    Query_705    181  CAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCTGGCGAAGACAGCGCAACTGG  270
V  88.2% (216/245)  IGHV4-34*01  229  ..GT...........C..A......T.....................G.....C......A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (49/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------.......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_705    271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (49/50)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_23304

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD1-26*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTGTTTTC	TGGGACCTACT	CCCTTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGTTTTCTGGGACCTACTCCCTTCTTGACTAC	ARVFSGTYSLLDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  T  A  F  G  Y  S  F  T  S  Y
                    Query_706    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTACGGCTTTTGGATACAGCTTTACCAGTTA  90
V  95.8% (277/289)  IGHV5-51*03  6    ..............................................................A..G..C..................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  R  D  G  E  T  R  Y  S  P
                    Query_706    91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTCGTGACGGTGAAACCAGATACAGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   C...............................................................G.....TC...T..............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_706    181  GTCCTTCCAAGGCCAGGTCAGCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  ....................C....................................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                
                                        M  Y  Y  C  A  R  V  F  S  G  T  Y  S  L  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_706    271  CATGTATTATTGTGCGAGAGTGTTTTCTGGGACCTACTCCCTTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  354
V  95.8% (277/289)  IGHV5-51*03  276  .........C.........-----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                  
D  90.9% (10/11)    IGHD1-26*01  8    ---------------------------.....G.....----------------------------------------------  18
J  100.0% (40/40)   IGHJ4*02     7    --------------------------------------------........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_139269

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           311     4e-87
IGHD3-10*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGG	CCGAAGGTACCT	TGGGTCGGGGAG	ATTTATACCGTTTTCG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCGAAGGTACCTTGGGTCGGGGAGATTTATACCGTTTTCGGACTAT	ARGRRYLGSGRFIPFSDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  E  V  Y  G  G  S  F  N  N  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_707    1    ACCCTGTCCCTCACCTGCGAAGTCTATGGTGGGTCCTTCAATAATTACTTCTGGAACTGGATCCGCCAGCCCCCAGGAAAGGGTCTGGAG  90
V  90.6% (222/245)  IGHV4-34*01  49   ...................CT...................G.GG.....A.....G.....................G.....G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  V  S  H  S  G  N  T  N  Y  N  L  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_707    91   TGGATTGGGGAAGTCAGTCATAGTGGCAACACCAACTACAACCTGTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-34*01  139  ............A...A.........A.G..............C............................G.................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  Y  S  L  N  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  Y  L  G  S  G  R 
                    Query_707    181  CAGTACTCCCTGAACCTGGCTTCTGTGACCGCCGCGGACACGGCTGTCTACTACTGTGCGAGGGGCCGAAGGTACCTTGGGTCGGGGAGA  270
V  90.6% (222/245)  IGHV4-34*01  229  ....T.........G...AGC..........................G..T...........A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  91.7% (11/12)    IGHD3-10*01  10   -----------------------------------------------------------------------------...T........-  21

                                      -------------------->                                  
                                       F  I  P  F  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_707    271  TTTATACCGTTTTCGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.5% (39/40)    IGHJ4*02     9    ---------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_138425

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           260     1e-71
IGHD2-8*02                                                                                            16.1    2.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGATGCGGCGGAGTGAATTCGGC	ACTGGTGG	GG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATGCGGCGGAGTGAATTCGGCACTGGTGGGGACTTCTTTGACCAC	ARMRRSEFGTGGDFFDH	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	20	10	0	66.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	94	20	0	82.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	206	40	0	83.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  R  S  V  S  F  L  W  S  W  V  R  Q  D  P  G  K  G 
                    Query_708    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTGAGGAGTGTGTCTTTCCTCTGGAGCTGGGTCCGCCAGGACCCAGGGAAGGGC  90
V  83.7% (206/246)  IGHV4-31*03  49   ....................................A.C..C....GTGG..A.TA..........A........C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  R  Y  Y  S  G  S  S  R  Y  N  P  S  L  G  S  R  V  S  M  S  L  D  T  S 
                    Query_708    91   CTTGAGTGGATTGGTTACAGGTATTACAGTGGAAGTAGTCGGTATAATCCGTCCCTCGGGAGTCGAGTTTCCATGTCACTAGACACGTCT  180
V  83.7% (206/246)  IGHV4-31*03  139  ..G...........G....TC...........G..C.CCTAC..C..C.........AA..........A....A...G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       R  N  Q  F  S  L  K  L  T  S  V  T  T  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  F  G 
                    Query_708    181  AGGAACCAATTTTCCCTGAAGTTGACCTCAGTGACGACCGCGGACACGGCCATCTATTACTGTGCGCGGATGCGGCGGAGTGAATTCGGC  270
V  83.7% (206/246)  IGHV4-31*03  229  .A......G..C.........C...G...T.....TG..............G.G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      MGT-------------------->                                  
                                       T  G  G  D  F  F  D  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_708    271  ACTGGTGGGGACTTCTTTGACCACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  328
D  100.0% (8/8)     IGHD2-8*02   11   ........--------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*02     1    ----------...A.......T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_109195

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     4e-95
IGHD5-12*01                                                                                           10.3    115  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD5-12*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCA	GGCTA	GCCC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCAGGCTAGCCCTTGAGTAC	ERWQASP*V	241	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	126	24	20	2	2	83.3
FR3-IMGT	127	240	114	111	3	0	97.4
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	250	235	13	2	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  T  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_709    1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTCAGCACTTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-21*01  47   .....................C.....................T.GC....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  S  G  S  S  I    H  I  L  R  R  L  T  E  G  P  I  H  H  L  Q  R  Q  R  Q
                    Query_709    91   AGTGGGTCGCGGCCATTAGTGGTAGTAGTATT--CATATACTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  178
V  94.0% (235/250)  IGHV3-21*01  137  ........T.AT........A.........G.TA...................G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                        E  L  S  V  S  A  N  E  Q  P  E  S  R  G  H  G  C  L  L  L  C  E  R  W  Q  A  S  P  *  V
                    Query_709    179  AGAACTCAGTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATGGCAGGCTAGCCCTTGAGT  268
V  94.0% (235/250)  IGHV3-21*01  227  ........C...........................................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD5-12*01  12   ---------------------------------------------------------------------------.....----------  16
J  97.6% (41/42)    IGHJ4*02     7    ------------------------------------------------------------------------------------....C.  12

                                      ->                                  
                                        L  G  P  G  N  P  G  H  R  L  L   
                    Query_709    269  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  97.6% (41/42)    IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_109194

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           313     2e-87
IGHD4-4*01                                                                                            16.1    2.3  
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-4*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGATACC	ACAGTTACTAC	AGATATC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCGATACCACAGTTACTACAGATATCACTACAACTACCACGGTATGGACGTC	AKDRYHSYYRYHYNYHGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_710    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACGTTCAGTAGTTATGGCATGCATTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-30*18  47   ............................T........C........C...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  V  A  V  I  S  D  D  G  F  E  H  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_710    91   AGTCGGTGGCAGTTATTTCGGATGATGGATTCGAACACCATTATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCG  180
V  90.0% (225/250)  IGHV3-30*18  137  ...G............A..AT........AGTA.TA.AT.C..............................A.................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      E  K  T  L  Y  L  H  M  N  G  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  R  Y  H  S  Y  Y  
                    Query_710    181  AGAAGACGCTGTATCTGCACATGAACGGCCTGAGACCGGAGGACACGGCAGTGTATTACTGTGCGAAAGACCGATACCACAGTTACTACA  270
V  90.0% (225/250)  IGHV3-30*18  227  ....C..............A......A........G.T...........T....................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.9% (10/11)    IGHD4-4*01   6    ------------------------------------------------------------------------------.....A.....-  16

                                      R3-IMGT------------------------>                                 
                                      R  Y  H  Y  N  Y  H  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_710    271  GATATCACTACAACTACCACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  335
J  94.9% (56/59)    IGHJ6*02     4    ------.....T.....T....................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_321074

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           333     1e-93
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ5*01                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-1*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GTC	TACAACTGG	CGGGAGGGGGCGTTC	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTCTACAACTGGCGGGAGGGGGCGTTCACTCC	GLQLAGGGVHS	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_711    1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGCAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.8% (228/243)  IGHV3-33*01  47   ...........................................T.GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      G  W  V  A  I  I  W  Y  D  G  R  N  K  H  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_711    91   GGTGGGTGGCAATTATATGGTATGATGGAAGGAACAAACACTATGCAGACTCCGTCCAGGGCCGATTCACCATATCCAGAGACAATTCCA  180
V  93.8% (228/243)  IGHV3-33*01  137  A..........G...................T..T...T................GA................C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  G  L  Q  L  A  G  G  G  V  
                    Query_711    181  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCTGTATATTACTGTGGTCTACAACTGGCGGGAGGGGGCGTTC  270
V  93.8% (228/243)  IGHV3-33*01  227  ........C...........................C...G...........G..........---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (9/9)     IGHD1-1*01   3    ------------------------------------------------------------------.........---------------  11

                                      ---->                                  
                                      H  S  G  G  Q  G  T  L  V  T  V  S  S  
                    Query_711    271  ACTCCGGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  309
J  92.3% (36/39)    IGHJ5*01     13   .....T.......A..A......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_321075

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTCTGTG	AGCAGTGCCTGGT	CGTTTGGCCCCCCCCCACGACTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCTGTGAGCAGTGCCTGGTCGTTTGGCCCCCCCCCACGACTCTACTACCTCGACTGC	ARHSVSSAWSFGPPPRLYYLDC	250	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	135	27	21	0	6	77.8
FR3-IMGT	136	249	114	108	6	0	94.7
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	243	8	6	94.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  H  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_712    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGCAGTTACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.6% (243/257)  IGHV4-39*01  49   ...............................................T......T...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  N  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D 
                    Query_712    91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCAACACCAACTACAACCCGTCCCTCAAGAGTCGAGTAACCATGTCCGTAGAC  180
V  94.6% (243/257)  IGHV4-39*01  139  ...................................------....T............................C.....A.........  222
                                       L  E  W  I  G  S  I  Y  Y  S  G  S        T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------------
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  T  Y  Y  C  A  R  H  S  V  S  S 
                    Query_712    181  ACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGAGCGCCGCAGACACGGCTACGTATTACTGTGCGAGACATTCTGTGAGCAGT  270
V  94.6% (243/257)  IGHV4-39*01  223  ........................................C................GT..................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  92.3% (12/13)    IGHD6-19*01  7    ------------------------------------------------------------------------------------......  12

                                      --------CDR3-IMGT--------------------------->                                  
                                       A  W  S  F  G  P  P  P  R  L  Y  Y  L  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_712    271  GCCTGGTCGTTTGGCCCCCCCCCACGACTCTACTACCTCGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  349
D  92.3% (12/13)    IGHD6-19*01  13   .G.....------------------------------------------------------------------------  19
J  93.8% (45/48)    IGHJ4*02     1    -------------------------------.....T.T....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_13097

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           319     2e-89
IGHD2-21*02                                                                                           12.2    32   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTCCGCCCGGGGGCGC	CTGGTATTC	N/A	CGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTCCGCCCGGGGGCGCCTGGTATTCCGGAATGGACGTC	ARSPPGGAWYSGMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  C  P  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_713    1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAATACCTGTCCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.1% (226/248)  IGHV3-33*01  47   ..........................................G..G..A.GG......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  D  I  W  S  D  G  S  N  Q  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_713    91   AGTGGGTTGCGGATATATGGTCTGATGGAAGTAATCAATATTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  91.1% (226/248)  IGHV3-33*01  137  .......G..A.T........A.............A....C..T..A...........................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      N  N  A  L  Y  L  E  L  R  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  S  P  P  G  G  A  W  
                    Query_713    181  ACAACGCCCTGTATCTGGAATTGAGGAGCCTGAGAGCCGAGGACACGGCTGTCTATTTCTGTGCGAGAAGTCCGCCCGGGGGCGCCTGGT  270
V  91.1% (226/248)  IGHV3-33*01  227  .G...A.G.........C..A...AC..........................G....A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD2-21*02  19   -------------------------------------------------------------------------------------...C.  23

                                      ---------------->                                 
                                      Y  S  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_713    271  ATTCCGGAATGGACGTCTGGGGCCAAGGGACCACAGTCACCGTCTCCTCA  320
D  88.9% (8/9)      IGHD2-21*02  24   ....----------------------------------------------  27
J  95.7% (44/46)    IGHJ6*02     17   ----...T..........................G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_13096

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           297     7e-83
IGHD6-25*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCTGGAG	GCAGCGCCTA	TTATCAT	GGTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCTGGAGGCAGCGCCTATTATCATGGTTTGGACGTC	ARAGGSAYYHGLDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	216	26	0	89.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  R  S  G  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_714    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGAAGTGGCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  89.3% (216/242)  IGHV4-59*08  49   ..................A......................T...TA......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  Y  N  G  G  S  T  D  Y  N  P  S  L  R  S  R  V  T  I  S  A  D  T  S  K  K 
                    Query_714    91   TGGATTGGATACTTCTATAATGGGGGGAGCACCGATTACAATCCCTCCCTCAGGAGTCGAGTCACCATCTCAGCAGACACGTCCAAGAAG  180
V  89.3% (216/242)  IGHV4-59*08  139  ........G..TA.....T.CA.T.........A.C.....C..........A...............A....T...............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  L  S  L  T  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  G  S  A  Y  Y  H  G 
                    Query_714    181  CAACTCTCCCTGACGGTGACCTCTGTGACCGCCGCAGACACGGCCGTTTACTACTGTGCGAGGGCTGGAGGCAGCGCCTATTATCATGGT  270
V  89.3% (216/242)  IGHV4-59*08  229  ..GT.........A.C...G...........................G..T...........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.0% (9/10)     IGHD6-25*01  8    ----------------------------------------------------------------------......G...----------  17
J  95.6% (43/45)    IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                       L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_714    271  TTGGACGTCTGGGGCCAAGGGACCACGGTCACTGTCTCCTCA  312
J  95.6% (43/45)    IGHJ6*02     21   A...............................C.........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_67058

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            290     2e-80
IGHD1-26*01                                                                                           10.3    117  
IGHJ6*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACTTTCGCTTCGC	ACTAC	CTACATT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACTTTCGCTTCGCACTACCTACATTTGGACGTC	ARTFASHYLHLDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	245	217	25	3	88.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T     N  Q  W  W  T  W  V  R  Q  P  P  G  R  G  L 
                    Query_715    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAC---TAATCAGTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAGGGGGCTG  87
V  88.6% (217/245)  IGHV4-4*01   49   ........................................GCAG..G.A.C.......G.......................A.......  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  F  P  N  G  N  T  N  Y  S  P  S  L  K  S  R  L  T  I  S  M  A  K  S  K 
                    Query_715    88   GAGTGGATTGGGGAAATTTTTCCTAATGGAAACACCAACTACAGCCCGTCCCTCAAGAGTCGACTCACCATTTCAATGGCTAAGTCCAAG  177
V  88.6% (217/245)  IGHV4-4*01   139  .................C.A..A..G...G.G...........A...................G.......A...G.A.AC.........  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  V  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  T  F  A  S  H  Y  L  H 
                    Query_715    178  AACCAGGTCTCCCTGAAACTTAACTCTGTGACGGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGACTTTCGCTTCGCACTACCTACAT  267
V  88.6% (217/245)  IGHV4-4*01   229  ......T..........G..G.G.........C......................G.........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  100.0% (5/5)     IGHD1-26*01  16   -------------------------------------------------------------------------------.....------  20

                                      -------->                              
                                       L  D  V  W  G  Q  G  A  T  V  S  V  S 
                    Query_715    268  TTGGACGTCTGGGGCCAAGGGGCCACGGTCAGCGTCTCC  306
J  94.7% (36/38)    IGHJ6*02     22   -....................A.........C.......  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_67059

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGATCGGGGAAATATTAT	GCTCAAA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGATCGGGGAAATATTATGCTCAAAAC	ARGHSYGSGKYYAQN	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_716    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ...............................G.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_716    91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGGGTTACCATATCAGTTGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ........................................A........................A..............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  F  L  R  L  S  P  V  T  A  A  D  T  A  A  Y  Y  C  A  R  G  H  S  Y  G  S  G 
                    Query_716    181  AAGAACCAGTTCTTCTTGAGGCTGAGCCCTGTGACTGCCGCGGACACGGCCGCGTATTACTGTGCGAGAGGCCACTCCTATGGATCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .............C.C...A.......T........................T.................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD3-10*01  7    -----------------------------------------------------------------------------......T......  19

                                      ----------------->                                  
                                       K  Y  Y  A  Q  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_716    271  AAATATTATGCTCAAAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  86.4% (19/22)    IGHD3-10*01  20   .GT......-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_67056

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTTTATTCCCT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTATTCCCTCTACGGTATGGACGTC	ARHGDDTGGYLYSLYGMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	71	0	0	100
CDR1-IMGT	76	99	24	18	6	0	75
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	292	276	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  G  F  S  T  
                    Query_717    5    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGGTTTTTCCACTT  94
V  94.5% (276/292)  IGHV5-51*01  5    .............................................................................A.C...A...GC.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  
                    Query_717    95   ATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAGTC  184
V  94.5% (276/292)  IGHV5-51*01  95   .C.......G.................................................T.................A..........C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  P  D  T  
                    Query_717    185  CGTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCCCGGACACCG  274
V  94.5% (276/292)  IGHV5-51*01  185  ........C.....................C...............C...........................A.....T.........  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------------CDR3-IMGT----------------------->                   
                                      A  I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  S  L  Y  G  M  D  V  W  G  Q  G  T  T  
                    Query_717    275  CCATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTATTCCCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGG  364
V  94.5% (276/292)  IGHV5-51*01  275  ....G.................--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  85.7% (12/14)    IGHD1-26*01  4    ------------------------------...G....A.....----------------------------------------------  17
J  98.0% (48/49)    IGHJ6*02     14   -------------------------------------------------------...................................  48

                                                    
                                      V  T  V  S  S 
                    Query_717    365  TCACCGTCTCGTCA  378
J  98.0% (48/49)    IGHJ6*02     49   ..........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_67057

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD7-27*01                                                                                           14.1    8.3   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCA	AACTGGG	AACTCAATAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGACGTCAAACTGGGAACTCAATATACAACTGGTTCGACCCC	SRRQTGNSIYNWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_718    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.9% (238/243)  IGHV4-59*01  49   .......................................................G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_718    91   TGGATTGGATATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  ........G.................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  R  R  Q  T  G  N  S  I  Y  N 
                    Query_718    181  CAGTTCTCCCTGAGACTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTTCGAGACGTCAAACTGGGAACTCAATATACAAC  270
V  97.9% (238/243)  IGHV4-59*01  229  .............AG..........................................G.....---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD7-27*01  3    --------------------------------------------------------------------.......---------------  9
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------------.....  5

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_718    271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (51/51)   IGHJ5*02     6    ..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_67054

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           445     2e-127
IGHD3-22*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              108     9e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCCGT	TGGTTAT	AATTCCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTC	ARAVGYNSDYYYGMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	287	2	0	99.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_719    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  99.3% (287/289)  IGHV5-51*01  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_719    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGACC  180
V  99.3% (287/289)  IGHV5-51*01  96   .......................................................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  A  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_719    181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGGCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  99.3% (287/289)  IGHV5-51*01  186  .....................................T....................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        M  Y  Y  C  A  R  A  V  G  Y  N  S  D  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_719    271  CATGTATTACTGTGCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  99.3% (287/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-22*01  19   ------------------------.......-----------------------------------------------------------  25
J  100.0% (56/56)   IGHJ6*02     7    --------------------------------------....................................................  58

                                          
                                        S 
                    Query_719    361  CTCA  364
J  100.0% (56/56)   IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_67052

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           297     7e-83
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AAC	TTACGT	CCAGTCTAATCCTGAAAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACTTACGTCCAGTCTAATCCTGAAACTGACTAC	ATYVQSNPETDY	242	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	18	28	11	11	0	0	100
CDR1-IMGT	29	52	24	20	4	0	83.3
FR2-IMGT	53	103	51	50	1	0	98
CDR2-IMGT	104	127	24	18	6	0	75
FR3-IMGT	128	241	114	107	7	0	93.9
CDR3-IMGT (germline)	242	243	2	2	0	0	100
Total	N/A	N/A	226	208	18	0	92


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  P  L  R  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  
                    Query_720    18   GTGCAGCCTCTGGATTCCCCCTTAGGAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGGTATTA  107
V  92.0% (208/226)  IGHV3-23*01  65   .................A..T....C..C.......................................................C.....  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  D  S  S  L  S  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_720    108  GTGATAGCAGTCTTAGTACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATTTCCAGAGACAATTCCAAGAACACGCTGTATCTGC  197
V  92.0% (208/226)  IGHV3-23*01  155  ...G...TG..GG...C...T..................................C..................................  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------CDR3-IMGT------------>          
                                      Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  T  Y  V  Q  S  N  P  E  T  D  Y  W  G  Q  
                    Query_720    198  AGATGAACAGTCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCAACTTACGTCCAGTCTAATCCTGAAACTGACTACTGGGGCCAGG  287
V  92.0% (208/226)  IGHV3-23*01  245  .A........C...........G........C..A...........--------------------------------------------  290
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (6/6)     IGHD3-16*01  10   -------------------------------------------------......-----------------------------------  15
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------.................  24

                                                              
                                      G  T  L  V  T  V  S  S  
                    Query_720    288  GAACCCTGGTCACCGTCTCCTCAG  311
J  100.0% (41/41)   IGHJ4*02     25   ........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_67053

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           333     1e-93
IGHD3-3*01                                                                                            29.5    2e-04
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CATCGATCCCGGGG	ATTACGATTTCGGGAGTGGTT	T	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACATCGATCCCGGGGATTACGATTTCGGGAGTGGTTTCTACGGTTTGGACGCC	ARDIDPGDYDFGSGFYGLDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	131	27	21	3	3	77.8
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	253	235	15	3	92.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  F  S  C  A  A  S  G  F  T  F  S  T  Y  V  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_721    1    GGTCCCTGAGATTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTACCTATGTCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.9% (235/253)  IGHV3-33*01  47   ...........C.................................G.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><--------CDR2-IMGT--------><------------------------------------------------
                                      E  W  V  A  V  I  W  N  D  G  T  D  N  K  N  Y  A  D  P  V  K  G  R  F  T  I  S  R  D  N  
                    Query_721    91   AGTGGGTGGCAGTTATATGGAATGATGGAACTGATAATAAGAATTATGCAGACCCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATT  180
V  92.9% (235/253)  IGHV3-33*01  137  ....................T.........---G......AT.C.........T....................................  223
                                      E  W  V  A  V  I  W  Y  D  G     S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  

                                      ----FR3-IMGT----------------------------------------------------><------------------------
                                      S  K  N  T  L  Y  L  Q  V  N  S  V  R  D  E  D  T  A  V  Y  Y  C  A  R  D  I  D  P  G  D  
                    Query_721    181  CCAAGAACACGCTGTATTTGCAAGTGAACAGTGTGAGAGACGAGGACACGGCTGTCTATTACTGTGCGAGAGACATCGATCCCGGGGATT  270
V  92.9% (235/253)  IGHV3-33*01  224  .................C.....A.......CC......C...............G.................-----------------  296
                                      S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                    
D  90.5% (19/21)    IGHD3-3*01   3    ---------------------------------------------------------------------------------------...  5

                                      -CDR3-IMGT------------------------>                                 
                                      Y  D  F  G  S  G  F  Y  G  L  D  A  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_721    271  ACGATTTCGGGAGTGGTTTCTACGGTTTGGACGCCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  338
D  90.5% (19/21)    IGHD3-3*01   6    .......TT.........--------------------------------------------------  23
J  93.9% (46/49)    IGHJ6*02     14   -------------------.......A......T.......................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_67050

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD2-2*01                                                                                            39.1    3e-07
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACG	TTGTAGTAGTACCAGCTGCT	TTTACGAG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACGTTGTAGTAGTACCAGCTGCTTTTACGAGATGGACGTC	ARVRCSSTSCFYEMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	26	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	243	233	10	0	95.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  T  V  S  G  D  S  I  N  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  Q  
                    Query_722    2    CCCTGTCCCTCACCTGCACTGTCTCTGGCGACTCCATCAATAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGCAGT  91
V  95.9% (233/243)  IGHV4-59*01  50   ............................T.G........G....T.........................................G...  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  K  N  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_722    92   GGATTGGCTATATCTATTACAGTGGGAGCACCAAGAACAACCCTTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  181
V  95.9% (233/243)  IGHV4-59*01  140  .......G..........................CT.......C..............................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  C  S  S  T  S  C  F  
                    Query_722    182  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGTACGTTGTAGTAGTACCAGCTGCTTTT  271
V  95.9% (233/243)  IGHV4-59*01  230  ..............................................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (20/20)   IGHD2-2*01   7    -------------------------------------------------------------------....................---  26

                                      ------------->                                 
                                      Y  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_722    272  ACGAGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  100.0% (42/42)   IGHJ6*02     21   -----..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_18861

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD1-26*01                                                                                           12.2    31   
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARAKGIAVIVDAFDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_723    1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ..................A.....................G............................C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  V  S  V  D  M  S  N  N 
                    Query_723    91   TGGATTGGATATATCTATTACAGAGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAGACATGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G..............T....G.....A......C.....CC................CA.A..........C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  K  G  I  A  V  I  V  D 
                    Query_723    181  CGGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGTGCGAGAGCTAAGGGTATCGCTGTTATAGTAGAT  270
V  90.6% (221/244)  IGHV4-59*01  229  .A...........AG.................T.......CG.....G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------------......----  8
J  91.8% (45/49)    IGHJ3*01     2    ---------------------------------------------------------------------------------------...  4

                                      ----------->                                  
                                       A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_723    271  GCTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  316
J  91.8% (45/49)    IGHJ3*01     5    .........G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_18863

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           367     6e-104
IGHD3-10*01                                                                                           14.1    9.6   
IGHJ2*01                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGCC	ACTATGG	GGATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATC	ARSHYGDAYWYLDI	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	95	19	0	83.3
CDR3-IMGT (germline)	292	296	5	5	0	0	100
Total	N/A	N/A	293	264	29	0	90.1


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T 
                    Query_724    4    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATCTTCACC  93
V  90.1% (264/293)  IGHV1-18*01  1    .....T.................................................................T..........C...T...  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  F  E  W  M  G  W  I  S  P  Y  N  G  N  T  A  Y 
                    Query_724    94   AGTTATGGAATCACTTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAGCCTAC  183
V  90.1% (264/293)  IGHV1-18*01  91   ..C.....T....GC...........................C.......................G.................AA...T  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  E  K  F  Q  G  R  F  T  V  A  T  E  T  S  T  N  T  A  F  M  E  L  R  S  L  K  A  D  A 
                    Query_724    184  GCAGAGAAGTTCCAGGGCAGATTCACCGTGGCCACAGAGACTTCCACGAACACAGCCTTCATGGAGCTGCGGAGTCTGAAGGCTGACGCC  273
V  90.1% (264/293)  IGHV1-18*01  181  ...C.....C...........G.....A..A.......C..A.......G........A..........A....C....GAT......A.  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  S  H  Y  G  D  A  Y  W  Y  L  D  I  W  G  R  G  P  L  V  T  V  S 
                    Query_724    274  ACGGCCGTCTATTACTGTGCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATCTGGGGCCGTGGCCCCCTGGTCACTGTCTCC  363
V  90.1% (264/293)  IGHV1-18*01  271  ........G..............-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (7/7)     IGHD3-10*01  6    ----------------------------.......-------------------------------------------------------  12
J  94.3% (50/53)    IGHJ2*01     1    -----------------------------------------..........T.....C..............A.................  49

                                          
                                       S  
                    Query_724    364  TCAG  367
J  94.3% (50/53)    IGHJ2*01     50   ....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_18862

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-10*01                                                                                           10.3    115  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGCCGTCA	GGGGA	CC	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGCCGTCAGGGGACCGGTTCGACCCC	ARWPSGDRFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  P  Y  Y  W  G  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_725    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGACCTTACTACTGGGGCTGGATCCGGCAGACCCCGGGGAAGGGACTGGAG  90
V  93.8% (228/243)  IGHV4-59*01  49   .........................................TAG..........A..............C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  P  K  N 
                    Query_725    91   TGGATTGGGTATATCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGCCCAAGAAC  180
V  93.8% (228/243)  IGHV4-59*01  139  ...............T.................................................................T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  R  V  T  S  M  N  A  A  D  T  A  V  Y  Y  C  A  R  W  P  S  G  D  R  F  D  P 
                    Query_725    181  CAGTTCTCCCTCAGGGTGACCTCTATGAACGCTGCGGACACGGCCGTTTATTACTGTGCGAGATGGCCGTCAGGGGACCGGTTCGACCCC  270
V  93.8% (228/243)  IGHV4-59*01  229  ...........G.A.C...G....G...C..................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-10*01  16   ------------------------------------------------------------------------.....-------------  20
J  100.0% (45/45)   IGHJ5*02     7    -------------------------------------------------------------------------------...........  17

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_725    271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (45/45)   IGHJ5*02     18   ..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_18865

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           318     6e-89
IGHD3-10*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTTGG	GGTTCGGGGAATTAT	CAGGGAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGGGGTTCGGGGAATTATCAGGGATCTACTACTACGGTATGGACGTC	ARLGFGELSGIYYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  F  T  T  Y  S  F  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_726    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCTTCACTACATATAGTTTCCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (225/247)  IGHV3-21*01  47   ...................................A......G..GC.....CA.GA.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  N  R  N  T  Y  R  N  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  S  
                    Query_726    91   AGTGGGTCTCGTCCATCAGTAATCGAAATACTTACAGAAACTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  91.1% (225/247)  IGHV3-21*01  137  ..........A.....T....G.A.T.G..G.....T.T..............G................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  R  L  G  F  G  E  L  S  
                    Query_726    181  GGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTTCTGTGCGAGGTTGGGGTTCGGGGAATTATCAG  270
V  91.1% (225/247)  IGHV3-21*01  227  A...................................C....................A.........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------------..........G....---  25

                                      IMGT--------------------->                                 
                                      G  I  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_726    271  GGATCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  100.0% (55/55)   IGHJ6*02     8    ----.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_18864

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           307     1e-85
IGHD6-19*01                                                                                           12.2    30   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTGGC	GGCTGG	CTTAC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTGGCGGCTGGCTTACGGACGTC	TRGGGWLTDV	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	220	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  A  C  T  V  S  G  G  S  I  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_727    1    ACCCTGTCCCTCGCCTGCACTGTCTCTGGAGGCTCCATCAGTGGTTTCTACTGGAGCTGGATTCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.2% (220/244)  IGHV4-59*01  49   ............A................T............A...A...............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  H  Y  S  G  H  T  N  Y  N  P  S  L  R  S  R  V  I  I  S  L  D  T  S  N  N 
                    Query_727    91   TGGATTGGGAATATCCACTACAGTGGGCACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCATCATATCGCTGGACACGTCCAACAAC  180
V  90.2% (220/244)  IGHV4-59*01  139  .........T.....T.T.........AG.......................A...........C......AG.A...........G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  I  S  L  K  V  N  S  G  T  A  A  D  T  A  L  Y  Y  C  T  R  G  G  G  W  L  T  D  V  W 
                    Query_727    181  CAGATCTCCCTGAAGGTGAACTCTGGGACCGCTGCGGACACGGCCCTCTATTATTGTACGAGAGGTGGCGGCTGGCTTACGGACGTCTGG  270
V  90.2% (220/244)  IGHV4-59*01  229  ...T...........C...G.....T...................G.G.....C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  13   ---------------------------------------------------------------------......---------------  18
J  100.0% (40/40)   IGHJ6*02     23   --------------------------------------------------------------------------------..........  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_727    271  GGCCAAGGGACCACGGTCACCGTCTCCTCA  300
J  100.0% (40/40)   IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_18867

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           282     4e-78
IGHD4-17*01                                                                                           12.2    32   
IGHJ2*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACAGTTTTTATCCCCCGTCG	GACTAC	TT	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAACAGTTTTTATCCCCCGTCGGACTACTTCTTCGATCTC	ARDNSFYPPSDYFFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	93	21	0	81.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  K  N  Y  N  M  N  W  V  R  Q  V  P  G  K  G  L  
                    Query_728    1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAAGAACTACAACATGAACTGGGTCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  86.0% (215/250)  IGHV3-21*01  47   ....................G.....................GT.G...T.G....................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  S  R  N  N  D  I  Q  Y  A  D  S  M  R  G  R  V  I  I  S  R  D  N  V  
                    Query_728    91   AGTGGGTCTCATCGATTAGGAGTAGGAACAATGACATACAATACGCAGACTCAATGAGGGGCCGAGTCATCATCTCCAGGGACAATGTCA  180
V  86.0% (215/250)  IGHV3-21*01  137  .............C.....T.....T.GT.G.T.....T.C............G...A.......T...C.........A.....C.C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  S  S  L  Y  L  H  M  S  S  L  R  T  E  D  T  A  I  Y  F  C  A  R  D  N  S  F  Y  P  P  
                    Query_728    181  ACAGTTCTCTGTATCTCCACATGAGCAGCCTGCGAACCGAGGACACGGCTATCTATTTCTGTGCGAGAGATAACAGTTTTTATCCCCCGT  270
V  86.0% (215/250)  IGHV3-21*01  227  .G.AC..A........G..A....A.......A..G..............G.G....A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      T------------------>                                  
                                      S  D  Y  F  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_728    271  CGGACTACTTCTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCTTCAG  324
D  100.0% (6/6)     IGHD4-17*01  2    --......----------------------------------------------  7
J  97.7% (43/44)    IGHJ2*01     10   ----------.......................................C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_18866

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            392     2e-111
IGHD6-6*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCCGACGT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACGTC	ARALRNQLVSDV	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	70	1	0	98.6
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	100	14	0	87.7
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                     <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  
                    Query_729   5    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCT  94
V  93.1% (271/291)  IGHV1-8*02  5    ...................G..........................................................C.....C.....  94
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  

                                     ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                     Y  D  I  T  W  V  R  Q  A  T  G  Q  G  L  G  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  
                    Query_729   95   ATGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGGGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCAC  184
V  93.1% (271/291)  IGHV1-8*02  95   .........A................................A........................C......................  184
                                     Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  

                                     -------------------------------------------FR3-IMGT---------------------------------------
                                     Q  K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  
                    Query_729   185  AGAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGG  274
V  93.1% (271/291)  IGHV1-8*02  185  ........C............C.......A..A...C.T....A..................C..........G.GAT....G.......  274
                                     Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                     -------------><-------------CDR3-IMGT------------>                                  
                                     A  V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  V  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_729   275  CCGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACGTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  93.1% (271/291)  IGHV1-8*02  275  ....G................---------------------------------------------------------------  295
                                     A  V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    --------------------------------........--------------------------------------------  16
J  100.0% (35/35)   IGHJ4*02    14   -------------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_181260

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            388     5e-110
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_730   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  92.8% (269/290)  IGHV1-8*02  6    ..................G..........................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  R  G  N  T  G  Y  A  Q
                    Query_730   91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGAGGGAACACAGGCTATGCACA  180
V  92.8% (269/290)  IGHV1-8*02  96   ........A.........................................................C..T..T.................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_730   181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  92.8% (269/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  F  S  S  
                    Query_730   271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCTTCTCCTCAG  353
V  92.8% (269/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  95.0% (38/40)    IGHJ4*02    9    -------------------------------------------....A.........................G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_125919

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           369     2e-104
IGHD3-10*01                                                                                           12.2    36    
IGHJ3*01                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCCCGCGAGACACTCAC	TTCGGG	CGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCCGCGAGACACTCACTTCGGGCGGGCTTTTGATGTC	ATPRDTHFGRAFDV	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	70	5	0	93.3
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	19	5	0	79.2
FR3-IMGT	177	290	114	103	11	0	90.4
CDR3-IMGT (germline)	291	294	4	4	0	0	100
Total	N/A	N/A	292	264	28	0	90.4


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  T  S  G  S  S  V  K  V  S  C  K  T  S  G  G  P  F  S 
                    Query_731    3    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGACGTCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACTTCTGGAGGCCCCTTCAGT  92
V  90.4% (264/292)  IGHV1-69*01  1    ...G...................G.............A.C.............................G...........A.......C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  A  L  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  F  I  P  T  L  G  T  T  D  Y 
                    Query_731    93   AACTATGCTCTCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGCTGGGATGGTTCATCCCTACCCTTGGGACAACAGACTAC  182
V  90.4% (264/292)  IGHV1-69*01  91   .G.......A...............................G.........A.....G..A.........T.T....T...G..A.....  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  T  F  Q  G  R  V  T  F  T  A  D  E  S  T  G  T  V  Y  M  E  V  S  G  L  T  S  E  D 
                    Query_731    183  GCACAGACGTTCCAGGGCAGAGTCACTTTTACCGCGGACGAATCCACGGGCACAGTCTACATGGAGGTGAGCGGCCTGACATCTGAAGAC  272
V  90.4% (264/292)  IGHV1-69*01  181  .......A..................GA....................A......C..........C.....A......G......G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  T  P  R  D  T  H  F  G  R  A  F  D  V  W  G  Q  G  T  L  V  T  V  S 
                    Query_731    273  ACGGCCGTCTATTACTGTGCGACCCCGCGAGACACTCACTTCGGGCGGGCTTTTGATGTCTGGGGCCAGGGGACACTGGTCACCGTCTCT  362
V  90.4% (264/292)  IGHV1-69*01  271  ........G.............--------------------------------------------------------------------  292
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (6/6)     IGHD3-10*01  13   ---------------------------------------......---------------------------------------------  18
J  95.7% (44/46)    IGHJ3*01     5    ------------------------------------------------....................A......A..............  46

                                          
                                       S  
                    Query_731    363  TCAG  366
J  95.7% (44/46)    IGHJ3*01     47   ....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_125918

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           396     2e-112
IGHD6-19*01                                                                                           18.0    0.65  
IGHJ5*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCG	AGCAGTGTCTGG	GACATAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGCAGTGTCTGGGACATATTGGTTCGACACC	ARDRAVSGTYWFDT	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  R  G  T  F  S  A  F
                    Query_732    1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCTTCTCGAGGCACCTTCAGCGCCTT  90
V  93.5% (272/291)  IGHV1-69*06  6    ..................G.......................C...........................G..............AG..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  L  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  N  Y  A  Q
                    Query_732    91   TGGTCTCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGATCATCCCTATATTTGGTACAACAAACTACGCACA  180
V  93.5% (272/291)  IGHV1-69*06  96   ..C.A...............................G.............................C.........G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  T  A  D  K  S  T  S  T  V  Y  M  E  L  S  S  L  K  S  E  D  T  A
                    Query_732    181  GAAGTTCCAGGACAGAGTCACGATTACCGCGGACAAATCCACCAGCACAGTGTACATGGAGCTGAGCAGCCTCAAATCTGAGGACACGGC  270
V  93.5% (272/291)  IGHV1-69*06  186  ...........G..............................G.......CC....................G.G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  D  R  A  V  S  G  T  Y  W  F  D  T  W  G  Q  G  T  L  V  I  A  S  S  
                    Query_732    271  CATGTATTACTGCGCGAGAGATCGAGCAGTGTCTGGGACATATTGGTTCGACACCTGGGGCCAGGGAACCCTGGTCATCGCCTCCTCAG  359
V  93.5% (272/291)  IGHV1-69*06  276  .G..........T........--------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD6-19*01  7    ------------------------.......G....-----------------------------------------------------  18
J  93.5% (43/46)    IGHJ5*02     6    -------------------------------------------.........C........................C..T........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_125917

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           290     2e-80
IGHD3-3*01                                                                                            16.1    2.3  
IGHJ5*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGATGGGGAAGGGACT	ATTTTTGG	GATGGGGTGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGATGGGGAAGGGACTATTTTTGGGATGGGGTGAGGTTCGACTCT	ARGRWGRDYFWDGVRFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	217	32	0	87.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  R  F  S  L  E  T  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_733    1    GGTCCCTGAGACTCTCCTGTGTCGGCTCTCGATTCAGCCTCGAAACGTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.1% (217/249)  IGHV3-48*03  47   .....................CA.C....G......C.T..AGT.GT...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  S  G  S  T  R  H  Y  A  D  S  M  K  G  R  L  T  I  S  R  D  N  A  
                    Query_733    91   AATGGATCTCATACATCAGCAGTAGTGGCAGTACCAGACATTACGCAGACTCCATGAAAGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  87.1% (217/249)  IGHV3-48*03  137  .G...G.T........T..T........T.......T.T.C...........TG....G......T........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      N  N  S  I  F  L  Q  M  N  S  L  R  V  E  D  T  A  I  Y  F  C  A  R  G  R  W  G  R  D  Y  
                    Query_733    181  ACAACTCAATATTTCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTATTTATTTCTGTGCGAGAGGCCGATGGGGAAGGGACTATT  270
V  87.1% (217/249)  IGHV3-48*03  227  .G......C.G.A.......................C.............G......A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-3*01   9    ---------------------------------------------------------------------------------------...  11

                                      IMGT--------------------->                                  
                                      F  W  D  G  V  R  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_733    271  TTTGGGATGGGGTGAGGTTCGACTCTTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  330
D  100.0% (8/8)     IGHD3-3*01   12   .....-------------------------------------------------------  16
J  93.3% (42/45)    IGHJ5*01     7    ---------------..........C........A....C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_125915

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            321     7e-90
IGHD6-13*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGTCCAC	TATAGCACCAGCTGGTA	TC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGTCCACTATAGCACCAGCTGGTATCACTTTGACTAC	ARGVHYSTSWYHFDY	237	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	106	8	0	93
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	231	218	13	0	94.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  D  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  
                    Query_734    13   GTGCAGCCTCTGGATTCACCTTTAGTGACTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAA  102
V  94.4% (218/231)  IGHV3-7*01   65   ..........................AG............C.................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      K  Q  D  G  N  E  Q  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_734    103  AGCAAGATGGAAATGAGCAACACTACGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTTTATTTGC  192
V  94.4% (218/231)  IGHV3-7*01   155  ............G....A..T....T........................................................G...C...  244
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      H  M  N  S  L  R  V  E  D  T  A  L  Y  F  C  A  R  G  V  H  Y  S  T  S  W  Y  H  F  D  Y  
                    Query_734    193  ACATGAACAGCCTGAGAGTCGAGGACACGGCTCTGTATTTCTGTGCGAGAGGAGTCCACTATAGCACCAGCTGGTATCACTTTGACTACT  282
V  94.4% (218/231)  IGHV3-7*01   245  .A................C.............G......A...........---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  94.1% (16/17)    IGHD6-13*01  4    -----------------------------------------------------------.......G.........--------------  20
J  91.1% (41/45)    IGHJ4*02     4    ------------------------------------------------------------------------------............  15

                                                                       
                                      W  G  Q  G  T  L  I  S  A  S  S  
                    Query_734    283  GGGGCCAGGGAACCCTGATCAGTGCCTCCTCAG  315
J  91.1% (41/45)    IGHJ4*02     16   .................G...CC.T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_125913

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           318     6e-89
IGHD4-17*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCGGGGAGAGATT	CTACGGTGACT	CGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCGGGGAGAGATTCTACGGTGACTCGGTTGACTAC	AKVGERFYGDSVDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  F  S  D  Y  D  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_735    1    GGTCCCTGAGACTCTCCTGTACAGCCTCAGGATTCATCTTTAGCGATTATGACCTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-23*01  47   ....................G.......T.......C.......AGC....C.A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  T  N  V  G  D  R  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  H  T  S  
                    Query_735    91   AGTGGGTCTCAACTATTACTAATGTTGGTGATAGGACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGACACACTTCCA  180
V  90.8% (226/249)  IGHV3-23*01  137  ...........G......G.GG.AG.....G...C.............................................G...A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  N  T  L  Y  L  Q  M  N  S  L  K  A  E  D  T  A  V  Y  Y  C  A  K  V  G  E  R  F  Y  G  
                    Query_735    181  GGAACACACTGTATCTGCAAATGAACAGCCTGAAAGCCGAGGACACGGCCGTATATTATTGTGCGAAAGTCGGGGAGAGATTCTACGGTG  270
V  90.8% (226/249)  IGHV3-23*01  227  A......G.........................G........................C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD4-17*01  4    ----------------------------------------------------------------------------------........  11

                                      ------------->                                  
                                      D  S  V  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_735    271  ACTCGGTTGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  318
D  100.0% (11/11)   IGHD4-17*01  12   ...---------------------------------------------  14
J  97.6% (41/42)    IGHJ4*02     7    ------..............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_125912

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGATGGCCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTC	VRQSSDGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  S  Y
                    Query_736    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCAGTTA  90
V  95.5% (278/291)  IGHV5-51*01  6    ....................................C.......................................AG.........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  T  G  L  E  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  S  P
                    Query_736    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGTGGATGGGGATCATCTTTCCGGATGACTCTGATACCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ................................A..........................A...T.G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_736    181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  ............................................G.....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                           
                                        K  Y  Y  C  V  R  Q  S  S  D  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_736    271  CAAGTATTATTGTGTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  355
V  95.5% (278/291)  IGHV5-51*01  276  ..T......C....C......----------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                   
J  100.0% (42/42)   IGHJ6*02     15   -------------------------------------------..........................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_21470

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         369     2e-104
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GCCTTCGGG	ACTATGTTTCGGGGAATTA	CT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGCCTTCGGGACTATGTTTCGGGGAATTACTACAACTGGTTCGACCCC	ARGLRDYVSGNYYNWFDP	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_737      1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTATTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  97.2% (243/250)  IGHV4-30-4*01  49   .................................................A...C.A.....GT...........................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_737      91   CTGGAGTGGATTGGGTACATCTATTACAGTGGAAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  97.2% (243/250)  IGHV4-30-4*01  139  ................................G.........................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R  G  L  R  D  Y  V  S 
                    Query_737      181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTGCTGTGCCAGAGGCCTTCGGGACTATGTTTCG  270
V  97.2% (243/250)  IGHV4-30-4*01  229  ..........................................................A...........--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.5% (17/19)    IGHD3-10*01    6    -------------------------------------------------------------------------------......G....  16

                                        -IMGT--------------------->                                  
                                         G  N  Y  Y  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_737      271  GGGAATTACTACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  89.5% (17/19)    IGHD3-10*01    17   ....G...-----------------------------------------------------  24
J  100.0% (51/51)   IGHJ5*02       1    ----------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_125910

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHD2-15*01                                                                                           21.8    0.039
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AAAGTCT	GATATTGTAGT	CCC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGTCTGATATTGTAGTCCCTATGGACGTC	AKSDIVVPMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_738    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.0% (227/244)  IGHV3-21*01  47   .............................................G......C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  V  G  T  Y  I  E  Y  A  S  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_738    91   AGTGGGTCTCGTACATTTCTAGTGTTGGTACTTACATAGAGTACGCAAGCTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  93.0% (227/244)  IGHV3-21*01  137  ..........A.C....AG....AG.A...G.......T.C......GA......................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  L  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  S  D  I  V  V  P  M  
                    Query_738    181  AGAACTTACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGCAAAGTCTGATATTGTAGTCCCTATGG  270
V  93.0% (227/244)  IGHV3-21*01  227  ......C..................................................A......--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD2-15*01  3    -----------------------------------------------------------------------...........--------  13
J  100.0% (43/43)   IGHJ6*02     20   -------------------------------------------------------------------------------------.....  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_738    271  ACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  308
J  100.0% (43/43)   IGHJ6*02     25   ......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_296925

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           277     9e-77
IGHD3-3*02                                                                                            18.0    0.59 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGTCT	CATTTATGGATCGGTTAT	GACCCC	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGTCTCATTTATGGATCGGTTATGACCCCCTTCGACAAC	ARLIYGSVMTPFDN	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	23	7	0	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	248	3	3	0	0	100
Total	N/A	N/A	245	211	34	0	86.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  D  S  I  I  N  N  D  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_739    4    CCCTGAGACTCTCCTGTAGTGTCTCTGGTGACTCCATCATCAATAATGATTACTATTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGTC  93
V  86.1% (211/245)  IGHV4-39*01  50   .....TCC...A....C.C...........G........G..G..G.AG......C................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  A  N  I  Y  H  N  G  D  T  L  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_739    94   TGGAGTGGATCGCCAACATCTATCATAATGGGGACACCCTCTACAATCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACATCCA  183
V  86.1% (211/245)  IGHV4-39*01  140  ..........T.GG.GT......T...G....AG....TA......C.............................C........G....  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      T  D  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  I  Y  G  S  V  M  
                    Query_739    184  CGGATCAGTTTTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGCGTCTCATTTATGGATCGGTTATGA  273
V  86.1% (211/245)  IGHV4-39*01  230  A.A.C.....C.......A......C.......................................-------------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  83.3% (15/18)    IGHD3-3*02   8    ----------------------------------------------------------------------.....T....GT......--  25

                                      ------------->                                  
                                      T  P  F  D  N  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_739    274  CCCCCTTCGACAACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  321
J  93.2% (41/44)    IGHJ4*02     5    ----...T...T........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_296921

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           319     2e-89
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGTCCCGACTGAACTACGGCATGGACGTC	ARLMSRLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  S  N  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_740    1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATCAGCAATTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  91.8% (224/244)  IGHV4-59*08  49   ..................A............G.........T.G................A............................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_740    91   TGGATTGAGTACATCTATTACAGGGGGAGTCCCAATAACGACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  91.8% (224/244)  IGHV4-59*08  139  .......G...T...........T.....CA....CT..A..................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  N  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_740    181  CAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCAAACACGGCCGTCTATTACTGTGCGAGACTAATGTCCCGACTGAACTACGGCATG  270
V  91.8% (224/244)  IGHV4-59*08  229  .............A.C...G................G..........G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  96.0% (48/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_740    271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  309
J  96.0% (48/50)    IGHJ6*02     24   ...................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_296923

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           425     3e-121
IGHD6-19*01                                                                                           16.1    2.6   
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGTGGGGAAACAGA	AGTGGCTG	CCA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCC	ARLRGETEVAANNWFDP	292	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	68	3	0	95.8
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	113	1	0	99.1
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	290	281	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  L  K  I  S  C  M  G  S  G  Y  T  F  A  G  
                    Query_741    8    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGCGTCTCTGAAGATCTCCTGTATGGGATCTGGATACACCTTTGCCGGCT  97
V  96.9% (281/290)  IGHV5-51*03  5    ..........................................A....................A...T..........G....A..A...  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  D  T  R  Y  S  
                    Query_741    98   ACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACTCTGATACCAGATACAGCC  187
V  96.9% (281/290)  IGHV5-51*03  95   .........G..............................................A.................................  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_741    188  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCG  277
V  96.9% (281/290)  IGHV5-51*03  185  ........................................C.................................................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><--------------------CDR3-IMGT-------------------->                         
                                      A  M  Y  Y  C  A  R  L  R  G  E  T  E  V  A  A  N  N  W  F  D  P  W  G  Q  G  T  L  V  T  
                    Query_741    278  CCATGTATTACTGTGCGAGACTTCGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCG  367
V  96.9% (281/290)  IGHV5-51*03  275  ....................----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (8/8)     IGHD6-19*01  10   -------------------------------------........---------------------------------------------  17
J  100.0% (50/50)   IGHJ5*02     1    ------------------------------------------------..........................................  42

                                              
                                      V  S  S 
                    Query_741    368  TCTCCTCA  375
J  100.0% (50/50)   IGHJ5*02     43   ........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_296922

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           308     4e-86
IGHD1-26*01                                                                                           18.0    0.58 
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGATACAACGAAA	TATACTGGGACCTAC	GATGGG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGATACAACGAAATATACTGGGACCTACGATGGGTTCGATCTC	ARDDTTKYTGTYDGFDL	235	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	120	21	15	3	3	71.4
FR3-IMGT	121	234	114	106	8	0	93
CDR3-IMGT (germline)	235	242	8	8	0	0	100
Total	N/A	N/A	245	223	19	3	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  L  S  G  V  S  I  S  G  Y  Y  W  H  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_742    1    ACCCTGTCCCTCACCTGCTCTCTCTCTGGTGTCTCCATCAGTGGTTACTACTGGCACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.0% (223/245)  IGHV4-59*01  49   ..................A..G.........G..........A...........AG..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N     S  G  G  T  K  Y  S  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_742    91   TGGATCGGCTATATCAAT---AGCGGGGGCACCAAGTACAGTCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  177
V  91.0% (223/245)  IGHV4-59*01  139  .....T..G......T..TAC..T...A.......C....AC..........A.....................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  F  Y  Y  C  A  R  D  D  T  T  K  Y  T  G  T 
                    Query_742    178  CAGTTCTCCCTGAAACTGACCTCTGTGACCGCTGCGGACACGGCCTTTTATTACTGTGCGAGAGACGATACAACGAAATATACTGGGACC  267
V  91.0% (223/245)  IGHV4-59*01  229  ..............G....G.........................G.G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  86.7% (13/15)    IGHD1-26*01  3    ------------------------------------------------------------------------------....G.....G.  14

                                      ----------------->                                  
                                       Y  D  G  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_742    268  TACGATGGGTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  319
D  86.7% (13/15)    IGHD1-26*01  15   ...-------------------------------------------------  17
J  100.0% (43/43)   IGHJ2*01     11   ---------...........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_296929

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         363     1e-102
IGHD3-16*02                                                                                           25.7    0.003 
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGCAGCC	TGGGGGAATTATCGTT	C	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGCAGCCTGGGGGAATTATCGTTCCTTTGACTAC	ARAAWGNYRSFDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  D  G  S  I  S  G  G  G  F  Y  W  S  W  L  R  Q  P  P  G  K  G 
                    Query_743      1    ACCCTGTCCCTCACCTGCACTGTCTCTGATGGCTCCATCAGCGGTGGTGGTTTCTACTGGAGTTGGCTCCGCCAGCCCCCAGGGAAGGGC  90
V  96.8% (240/248)  IGHV4-30-4*01  49   ............................G.............A......A..A.............A.......................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_743      91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  96.8% (240/248)  IGHV4-30-4*01  139  ..........................................................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         K  N  P  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  A  A  W  G  N  Y  R 
                    Query_743      181  AAGAACCCCTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTTCTGTGCCAGGGCAGCCTGGGGGAATTATCGT  270
V  96.8% (240/248)  IGHV4-30-4*01  229  .......AG.................................................A.........----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  93.8% (15/16)    IGHD3-16*02    17   ---------------------------------------------------------------------------.......G.......  31

                                        ----------->                                  
                                         S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_743      271  TCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  93.8% (15/16)    IGHD3-16*02    32   .---------------------------------------------  32
J  100.0% (44/44)   IGHJ4*02       5    --............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_296928

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD2-21*01                                                                                           10.3    122   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TGTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTGTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFVQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_744    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTTCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (240/248)  IGHV4-31*03  49   ...............................G..C......C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_744    91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCT  180
V  96.8% (240/248)  IGHV4-31*03  139  ..................................G.............C......................C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  V  Q  E 
                    Query_744    181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTTCTCTATTTGTCCAAGAA  270
V  96.8% (240/248)  IGHV4-31*03  229  ..........................C.........................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD2-21*01  22   ---------------------------------------------------------------------------.....----------  26

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_744    271  AGAGTCTACTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.9% (47/48)    IGHJ4*02     1    -------.....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_333890

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           347     7e-98
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGTCCCTC	ACGGTGAC	CTAGATT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGACGTCCCTCACGGTGACCTAGATTCC	ARDVPHGDLDS	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  S  T  F  S  S  F  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_745    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATCCACCTTCAGTAGCTTCTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-74*01  47   .................................T..............A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  I  T  V  D  G  S  G  T  V  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_745    91   AGTGGGTCTCACGCATTACTGTTGATGGCAGTGGCACAGTCTATGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-74*01  137  T............T....A.AG......G...A.....AG...C..............................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  V  P  H  G  D  L  
                    Query_745    181  AGAACACGTTGTATCTGCAAATGAACAGTCTGAGAGCCGACGACACGGCTGTGTATTACTGTGCAAGAGACGTCCCTCACGGTGACCTAG  270
V  94.4% (236/250)  IGHV3-74*01  227  ........C...............................G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD4-17*01  6    ------------------------------------------------------------------------------........----  13

                                      ---->                                  
                                      D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_745    271  ATTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (36/36)   IGHJ5*02     16   ---....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_20651

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           333     1e-93
IGHD3-16*01                                                                                           12.2    32   
IGHJ2*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGCCG	TGGGGG	CATCAAGGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGCCGTGGGGGCATCAAGGGATCCTGGTACTCCGATCTC	ARVRRGGIKGSWYSDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_746    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGACATGAGATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-48*03  47   ..............................................TT....A.....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  T  G  S  T  L  I  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_746    91   AGTGGGTTTCACACATTAGTACTGGTAGTACTCTTATACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  92.8% (231/249)  IGHV3-48*03  137  ...........T.........G.A..G...G.ACC...T..................................................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  V  R  R  G  G  I  K  
                    Query_746    181  AGAATTCTCTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGAGAGTCCGCCGTGGGGGCATCAAGG  270
V  92.8% (231/249)  IGHV3-48*03  227  ....C..A........G.................................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------------......--------  22

                                      T------------------>                                  
                                      G  S  W  Y  S  D  L  W  G  R  G  T  L  V  T  V  S  P  
                    Query_746    271  GATCCTGGTACTCCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCCCAG  324
J  96.0% (48/50)    IGHJ2*01     4    ----........T.....................................T...  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_20650

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     2e-95
IGHD1-20*01                                                                                           10.3    122  
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-20*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGCCCGAAAGAGAAGCC	TATAA	TAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGCCCGAAAGAGAAGCCTATAATAATGATGGTTTTGATATT	ARLPEREAYNNDGFDI	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  A  G  F  T  F  S  Y  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_747    1    GGTCCCTGAGACTCTCCTGTGCAGCCGCTGGATTCACCTTCAGTTACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-21*01  47   ..........................T.................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  S  R  T  D  F  I  Y  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  A  
                    Query_747    91   AGTGGGTCGCATCCATTAGTTCTAGGACTGATTTCATATACTACGCAGACTCAGTGACGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.9% (232/247)  IGHV3-21*01  137  ........T...........AG...T.G.AG..A.......................A................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  F  L  Q  M  H  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  L  P  E  R  E  A  Y  
                    Query_747    181  AGAACTCACTGTTTCTGCAAATGCACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGGCTGCCCGAAAGAGAAGCCTATA  270
V  93.9% (232/247)  IGHV3-21*01  227  ............A..........A............C..............................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD1-20*01  3    --------------------------------------------------------------------------------------....  6

                                      T------------------>                                  
                                      N  N  D  G  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_747    271  ATAATGATGGTTTTGATATTTGGGGCCAAGGGACAATGGTCACCGTCTCCTCAG  324
D  100.0% (5/5)     IGHD1-20*01  7    .-----------------------------------------------------  7
J  94.0% (47/50)    IGHJ3*02     1    ----.....C.........C.............................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_203772

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD2-8*02                                                                                            12.2    31   
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-8*02	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTAGA	GTACTG	CCACCGAGTCTAGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTAGAGTACTGCCACCGAGTCTAGGTGGTTCGACCCC	ARD*STATESRWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_748    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   .......................................................G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  H  S  G  T  T  Q  Y  N  P  S  L  K  S  R  V  T  I  S  M  D  T  S  K  K 
                    Query_748    91   TGGATTGGTTACATCCATCACAGTGGGACCACCCAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATGGACACGTCCAAGAAG  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G..T...T..T.........G....A.C....................................G.A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  *  S  T  A  T  E  S  R 
                    Query_748    181  CAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTTTATTATTGTGCGAGAGATTAGAGTACTGCCACCGAGTCTAGG  270
V  93.5% (229/245)  IGHV4-59*01  229  .............A......C...........T..............G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-8*02   9    ----------------------------------------------------------------------......--------------  14

                                      ----------->                                  
                                       W  F  D  P  W  G  H  G  T  L  V  T  V  S  S  
                    Query_748    271  TGGTTCGACCCCTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.8% (45/46)    IGHJ5*02     6    ....................G.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_203773

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           353     9e-100
IGHD6-19*01                                                                                           25.7    0.003 
IGHJ1*01                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTTGTC	CAGTGGCTGGTAC	ACT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTTGTCCAGTGGCTGGTACACTTACTTCCAGTAT	ARGLSSGWYTYFQY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_749    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGGAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  95.2% (238/250)  IGHV4-61*01  49   ....................................G..........T..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  S  G  T  A  F  Y  S  P  S  L  R  S  R  V  T  I  S  V  D  T  S 
                    Query_749    91   CTGGAGTGGATTGGGTATATCTATAACAGTGGGACCGCCTTCTATAGCCCCTCCCTCAGGAGCCGAGTCACCATATCAGTAGACACGTCC  180
V  95.2% (238/250)  IGHV4-61*01  139  ........................T.........G.A..AA...C.A...........A...T...........................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  S  S  G  W  Y 
                    Query_749    181  AAGAACCAGTTCTCCCTGAACCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGTTGTCCAGTGGCTGGTAC  270
V  95.2% (238/250)  IGHV4-61*01  229  ....................G.................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD6-19*01  9    -----------------------------------------------------------------------------.............  21

                                      -------------->                                  
                                       T  Y  F  Q  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_749    271  ACTTACTTCCAGTATTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  319
J  95.7% (44/46)    IGHJ1*01     7    ---.........C.C..................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_203770

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            343     2e-96
IGHD2-15*01                                                                                           14.1    9.0  
IGHJ6*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	CTTTGCCCAGAATCTTTTAC	GGTGGTGGCT	CCACTTTGCTGCGACGGCTTCGACTG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAAAGATCTTTGCCCAGAATCTTTTACGGTGGTGGCTCCACTTTGCTGCGACGGCTTCGACTGC	TKDLCPESFTVVAPLCCDGFDC	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	251	9	8	1	0	88.9
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_750    1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGGTTCACTTTTGATGACTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTAG  90
V  93.6% (235/251)  IGHV3-9*01   47   .....................C.........A.....C........T.........................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  N  W  N  S  H  S  L  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_750    91   AGTGGGTCGCAGGTATTAATTGGAATAGTCATAGTTTAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.6% (235/251)  IGHV3-9*01   137  ........T.........G..........GG...CA......................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  E  M  N  S  L  T  P  E  D  T  A  L  Y  Y  C  T  K  D  L  C  P  E  S  F  
                    Query_750    181  AGAACTCCCTGTATCTGGAAATGAACAGTCTGACACCTGAGGACACGGCCTTATATTACTGTACAAAAGATCTTTGCCCAGAATCTTTTA  270
V  93.6% (235/251)  IGHV3-9*01   227  .................C...............G.G................G.........G........-------------------  297
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                      -CDR3-IMGT--------------------------->                              
                                      T  V  V  A  P  L  C  C  D  G  F  D  C  W  G  Q  G  T  T  V  T  V  S 
                    Query_750    271  CGGTGGTGGCTCCACTTTGCTGCGACGGCTTCGACTGCTGGGGCCAAGGGACCACGGTCACCGTCTCC  338
D  90.0% (9/10)     IGHD2-15*01  14   -......A...---------------------------------------------------------  23
J  100.0% (31/31)   IGHJ6*02     29   -------------------------------------...............................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_203771

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           339     2e-95
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CATGCTTTCCTCGACTGATATGT	CGTTCGGGGGA	TTTTTGATTGCCCAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACATGCTTTCCTCGACTGATATGTCGTTCGGGGGATTTTTGATTGCCCAG	ARDMLSSTDMSFGGFLIAQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	234	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  S  S  R  S  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_751    1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGACTCCATCAGCAGTAGAAGTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGG  90
V  93.2% (234/251)  IGHV4-39*02  49   ...................C...........G...............T...........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  E  S  T  D  Y  N  P  S  L  E  S  R  V  A  I  S  I  D  T  S 
                    Query_751    91   CTGGAATGGATTGGGAATATCTATTATAGTGAGAGCACCGACTACAACCCGTCCCTCGAGAGTCGAGTCGCCATATCGATAGACACGTCC  180
V  93.2% (234/251)  IGHV4-39*02  139  .....G..........G..............G.......T.................A...........A.......CG...........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  M  L  S  S  T  D 
                    Query_751    181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACCGCCGCAGACACGGCTATTTATTACTGTGCGAGAGACATGCTTTCCTCGACTGAT  270
V  93.2% (234/251)  IGHV4-39*02  229  ........C............C....C........................G.G.................-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       M  S  F  G  G  F  L  I  A  Q  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_751    271  ATGTCGTTCGGGGGATTTTTGATTGCCCAGTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  334
D  90.9% (10/11)    IGHD3-16*01  13   ----....T......-------------------------------------------------  23
J  97.1% (33/34)    IGHJ4*02     15   ------------------------------.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_203776

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD6-13*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGGA	CAACGC	GGGTATAGCAGCACCTGG	AGCGTTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAGGACAACGCGGGTATAGCAGCACCTGGAGCGTTTTTTGACTAC	AEDNAGIAAPGAFFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_752    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGCTTCACGTTCAGCTATTATGGCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-23*01  47   ...............................A.....C..T...AGC....C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  T  I  S  A  S  G  R  S  T  H  Y  A  D  Y  L  K  G  R  F  T  I  S  R  D  N  S  
                    Query_752    91   AGTGGGTCGCAACTATTAGTGCTAGTGGTCGTAGCACACACTACGCAGACTATCTGAAGGGCCGGTTCACCATCTCCAGGGACAATTCCA  180
V  90.4% (226/250)  IGHV3-23*01  137  ........T..G.........G.......G........T............CCG.........................A..........  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  F  C  A  E  D  N  A  G  I  A  A  
                    Query_752    181  AGAACACACTGTATCTGCAGATGGACAGCCTGCGAGCCGAAGACACGGCCGTATATTTCTGTGCGGAGGACAACGCGGGTATAGCAGCAC  270
V  90.4% (226/250)  IGHV3-23*01  227  .......G...........A...A........A.......G................A.......A.A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  94.4% (17/18)    IGHD6-13*01  1    ----------------------------------------------------------------------------.............G  14

                                      T------------------>                                
                                      P  G  A  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_752    271  CTGGAGCGTTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  322
D  94.4% (17/18)    IGHD6-13*01  15   ....------------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     6    -----------.........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_203777

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            363     1e-102
IGHD4-17*01                                                                                           23.8    0.011 
IGHJ2*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	CGAGACCTCTG	TACGGTGACTAC	TTCA	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATACGAGACCTCTGTACGGTGACTACTTCAGGTACTTCGATCTC	AKDTRPLYGDYFRYFDL	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	252	10	10	0	0	100
Total	N/A	N/A	252	242	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_753    1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.0% (242/252)  IGHV3-9*01   47   .....................C....................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  E  I  V  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_753    91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGGTGAAATTGTCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (242/252)  IGHV3-9*01   137  ................................AGC..A.G..................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  L  N  T  L  T  A  E  D  T  A  F  Y  Y  C  A  K  D  T  R  P  L  Y  G  
                    Query_753    181  AGAACTCCCTGTATCTGCAACTGAACACTCTGACAGCTGAGGACACGGCCTTCTATTACTGTGCAAAAGATACGAGACCTCTGTACGGTG  270
V  96.0% (242/252)  IGHV3-9*01   227  ....................A......G.....G..................G...................------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (12/12)   IGHD4-17*01  5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                      D  Y  F  R  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_753    271  ACTACTTCAGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  327
D  100.0% (12/12)   IGHD4-17*01  12   .....----------------------------------------------------  16
J  100.0% (48/48)   IGHJ2*01     6    ---------................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_15686

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           357     1e-100
IGHD6-13*01                                                                                           14.1    8.1   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACTGG	GCAGCAG	GTGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACTGGGCAGCAGGTGTCTGACTAC	ARDTGQQVSDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_754    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTTCCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGTCTGG  90
V  95.6% (239/250)  IGHV3-21*01  47   ....................................C.......AG.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  N  S  S  S  F  I  F  H  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_754    91   AGTGGGTCTCATCCATTAGTAATAGTAGTAGTTTCATATTCCACGCAGACTCAGTGAAGGGCCGATTCACCATATCCAGAGACGACGCCA  180
V  95.6% (239/250)  IGHV3-21*01  137  .....................G...........A.....A.T...............................C.........A......  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      T  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  T  G  Q  Q  V  S  
                    Query_754    181  CGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATACTGGGCAGCAGGTGTCTG  270
V  95.6% (239/250)  IGHV3-21*01  227  A.....................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-13*01  8    ----------------------------------------------------------------------------.......-------  14
J  97.6% (40/41)    IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_754    271  ACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  309
J  97.6% (40/41)    IGHJ4*02     10   ...........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_203778

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTTCTACTTCTACGGTATGGACGTC	ARHGDDSGSYLFYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_755    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.5% (278/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_755    91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  P  A
                    Query_755    181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACCCCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  .......C.....................................C...........G......A....................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  F  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_755    271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTTCTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (54/55)    IGHJ6*02     8    ------------------------------------------------.....A....................................  49

                                                   
                                        T  V  S  S 
                    Query_755    361  CACCGTCTCCTCA  373
J  98.2% (54/55)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_203779

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD2-2*01                                                                                            23.8    0.011 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAG	TTGTAGTAGTAACACCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGTTGTAGTAGTAACACCTGCTACTACGAAATGGACGTC	ARVSCSSNTCYYEMDV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	236	7	0	97.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_756    4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  97.1% (236/243)  IGHV4-59*01  50   .....TCC...A..................G...........................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_756    94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGGTAGACACGTCCAAGAACC  183
V  97.1% (236/243)  IGHV4-59*01  140  ......................................................................A...................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  C  S  S  N  T  C  Y  
                    Query_756    184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTAAGTTGTAGTAGTAACACCTGCTACT  273
V  97.1% (236/243)  IGHV4-59*01  230  ..............................................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  88.9% (16/18)    IGHD2-2*01   7    -------------------------------------------------------------------...........C..G...-----  24
J  96.2% (50/52)    IGHJ6*02     11   -------------------------------------------------------------------------------------.....  15

                                      ------------->                                 
                                      Y  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_756    274  ACGAAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  96.2% (50/52)    IGHJ6*02     16   ...GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_50766

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           339     2e-95
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GTC	TACAACTGG	CGGGAGGGGGCGTTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTCTACAACTGGCGGGAGGGGGCGTTCACTAC	GLQLAGGGVHY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_757    1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGCAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.7% (230/243)  IGHV3-33*01  47   ...........................................T.GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  S  N  K  H  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_757    91   AGTGGGTGGCAATTATATGGTATGATGGAAGTAACAAACACTATGCAGACTCCGTCCAGGGCCGATTCACCATATCCAGAGACAATTCCA  180
V  94.7% (230/243)  IGHV3-33*01  137  ...........G......................T...T................GA................C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  G  L  Q  L  A  G  G  G  V  
                    Query_757    181  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCTGTATATTACTGTGGTCTACAACTGGCGGGAGGGGGCGTTC  270
V  94.7% (230/243)  IGHV3-33*01  227  ........C...........................C...G...........G..........---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (9/9)     IGHD1-1*01   3    ------------------------------------------------------------------.........---------------  11

                                      ---->                                  
                                      H  Y  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_757    271  ACTACAGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.4% (38/39)    IGHJ4*02     10   .....T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_50767

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           336     1e-94
IGHD1-7*01                                                                                            12.2    32   
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGCGAGGA	TGGAAGTAC	GACGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGCGAGGATGGAAGTACGACGGCTACTTCTACGGTATGGACGTC	ARDPRGWKYDGYFYGMDV	232	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	117	21	14	1	6	66.7
FR3-IMGT	118	231	114	109	5	0	95.6
CDR3-IMGT (germline)	232	239	8	8	0	0	100
Total	N/A	N/A	245	232	7	6	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_758    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCAATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (232/245)  IGHV4-59*01  49   ...................................C......................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S        W  S  T  N  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_758    91   TGGATTGGGTATATCTCTT------GGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCAGCATTTCAGTAGACACGTCCAAGAAT  174
V  94.7% (232/245)  IGHV4-59*01  139  ................A..ACAGTG.......................................C...A....................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  R  G  W  K  Y  D  G 
                    Query_758    175  CAGTTCTCCCTGAAGCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCCGCGAGGATGGAAGTACGACGGC  264
V  94.7% (232/245)  IGHV4-59*01  229  .................G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (8/9)      IGHD1-7*01   9    ---------------------------------------------------------------------------.....C...------  17
J  94.5% (52/55)    IGHJ6*02     8    -----------------------------------------------------------------------------------------.  8

                                      -------------------->                                 
                                       Y  F  Y  G  M  D  V  W  G  Q  G  S  T  V  T  V  S  S 
                    Query_758    265  TACTTCTACGGTATGGACGTCTGGGGCCAAGGTTCCACGGTCACCGTCTCCTCA  318
J  94.5% (52/55)    IGHJ6*02     9    ....A...........................GA....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_50764

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           382     4e-108
IGHD4-17*01                                                                                           16.1    2.5   
IGHJ2*01                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTGCCC	CTACGGTG	CCTTACCCCCT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTGCCCCTACGGTGCCTTACCCCCTTACTGGTACTTCGATCTC	ARCPYGALPPYWYFDL	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	97	17	0	85.1
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	292	268	24	0	91.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  S  
                    Query_759    2    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTTCCA  91
V  91.8% (268/292)  IGHV5-51*01  2    ....G................................................................G............C...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  H  W  I  G  W  V  S  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_759    92   GCCACTGGATCGGCTGGGTGAGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGACACCAGATACA  181
V  91.8% (268/292)  IGHV5-51*01  92   ..T.................C..........................................................T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  P  F  Q  E  Q  V  N  L  S  V  E  K  S  I  T  T  A  Y  L  Q  W  T  R  L  R  P  S  D  
                    Query_759    182  GCCCGCCCTTCCAAGAACAGGTCAACCTTTCAGTCGAAAAGTCCATCACCACCGCCTACCTGCAGTGGACCCGCCTGAGGCCCTCGGACA  271
V  91.8% (268/292)  IGHV5-51*01  182  .....T.........GC.......C.A.C....C...C..........G....................G.A......A.G.........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      T  G  I  F  Y  C  A  R  C  P  Y  G  A  L  P  P  Y  W  Y  F  D  L  W  G  L  G  P  L  V  T  
                    Query_759    272  CCGGCATTTTCTACTGTGCGAGGTGCCCCTACGGTGCCTTACCCCCTTACTGGTACTTCGATCTCTGGGGCCTTGGCCCCCTGGTCACTG  361
V  91.8% (268/292)  IGHV5-51*01  272  ...C...G.AT...........--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (8/8)     IGHD4-17*01  4    ----------------------------........------------------------------------------------------  11
J  96.0% (48/50)    IGHJ2*01     2    -----------------------------------------------.........................G....A............  44

                                             
                                      V  S  S
                    Query_759    362  TCTCCTC  368
J  96.0% (48/50)    IGHJ2*01     45   .......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_287659

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           343     2e-96
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGACC	TACGATTTTTGGAG	GGACC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGACCTACGATTTTTGGAGGGACCACTACTACGCTATGGACGTC	ARVTYDFWRDHYYAMDV	245	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	28	26	26	0	0	100
CDR1-IMGT	29	58	30	26	4	0	86.7
FR2-IMGT	59	109	51	49	2	0	96.1
CDR2-IMGT	110	130	21	19	2	0	90.5
FR3-IMGT	131	244	114	108	6	0	94.7
CDR3-IMGT (germline)	245	249	5	5	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  S  L  T  C  T  V  S  G  A  S  I  T  T  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_760    3    CCCTGTCCCTCACCTGCACTGTCTCTGGGGCCTCCATCACCACTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  92
V  94.3% (233/247)  IGHV4-39*01  50   ............................T.G........G..G...............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  T  V  Y  Y  I  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  
                    Query_760    93   TGGAATGGATTGGGACTGTCTATTATATTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCCGTGGACACGTCCA  182
V  94.3% (233/247)  IGHV4-39*01  140  ....G..........G.A.........G.............................A.....................A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  Q  F  S  L  R  L  S  S  L  T  A  A  D  T  A  V  Y  H  C  A  R  V  T  Y  D  F  W  R  
                    Query_760    183  AGAACCAGTTCTCCCTGAGGCTGAGCTCTTTGACCGCCGCAGACACGGCTGTCTATCACTGTGCGAGGGTGACCTACGATTTTTGGAGGG  272
V  94.3% (233/247)  IGHV4-39*01  230  ..................A..........G......................G...T..........-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (14/14)   IGHD3-3*01   5    --------------------------------------------------------------------------..............--  18

                                      GT-------------------->                                 
                                      D  H  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_760    273  ACCACTACTACGCTATGGACGTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  328
J  94.3% (50/53)    IGHJ6*02     10   ---.........G..................A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_287658

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*04                                                                                           327     9e-92
IGHD6-6*01                                                                                            19.9    0.15 
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*04	IGHD6-6*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCC	AGTATAGAAGATCGTC	GGCTGGT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCAGTATAGAAGATCGTCGGCTGGTTGCTTTTGATATC	ARPSIEDRRLVAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  R  G  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  Q 
                    Query_761    1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGGGGTTACTACTGGAGCTGGGTCCGTCAGCCCCCAGGGAAGGGGCTGCAG  90
V  93.0% (226/243)  IGHV4-34*04  49   .........................................T..................A....C.....................G..  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  I  N  H  R  G  S  S  Y  H  S  P  S  L  K  S  R  A  T  M  S  V  D  T  S  K  N 
                    Query_761    91   TGGCTTGGCGAAATCAACCATAGAGGAAGTAGCTATCACAGCCCGTCCCTCAAGAGTCGAGCCACCATGTCAGTTGACACGTCCAAGAAC  180
V  93.0% (226/243)  IGHV4-34*04  139  ...A....G........T.....T.....C.C.A.CA...A...........................A.....A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  N  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  S  I  E  D  R  R  L  V 
                    Query_761    181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGACCCAGTATAGAAGATCGTCGGCTGGTT  270
V  93.0% (226/243)  IGHV4-34*04  229  ...............................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (14/16)    IGHD6-6*01   2    ------------------------------------------------------------------.......C..C.....--------  17
J  100.0% (47/47)   IGHJ3*02     4    -----------------------------------------------------------------------------------------.  4

                                      ----------->                                  
                                       A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_761    271  GCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  316
J  100.0% (47/47)   IGHJ3*02     5    ..............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_50760

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           411     5e-117
IGHD1-1*01                                                                                            10.3    137   
IGHJ4*02                                                                                              52.6    6e-11 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAACG	GTTAACCCCATATCGCGGC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACGGTTAACCCCATATCGCGGCTTGGCTAT	ARGTVNPISRLGY	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	71	4	0	94.7
CDR1-IMGT	78	101	24	24	0	0	100
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	105	9	0	92.1
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	279	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_762    3    CAGGTCCAGCTTGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACC  92
V  94.6% (279/295)  IGHV1-46*01  1    .....G.....G...........G.C................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  A  G  S  T  N  Y 
                    Query_762    93   AGCTACTATGTGCACTGGGTACGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGCTGGTAGCACAAATTAC  182
V  94.6% (279/295)  IGHV1-46*01  91   .........A..........G....................................................G...........GC...  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  L  D  L  S  S  L  K  S  D  D 
                    Query_762    183  GCACAGAAATTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACTTGGACCTGAGCAGCCTTAAATCTGACGAC  272
V  94.6% (279/295)  IGHV1-46*01  181  ........G...................................................A....G...........G.G......G...  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       S  A  V  Y  Y  C  A  R  G  T  V  N  P  I  S  R  L  G  Y  W  G  Q  G  S  L  V  T  V  S  A 
                    Query_762    273  TCGGCCGTGTATTACTGTGCGAGAGGAACGGTTAACCCCATATCGCGGCTTGGCTATTGGGGCCAGGGATCCCTGGTTACCGTCTCCGCA  362
V  94.6% (279/295)  IGHV1-46*01  271  A........................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD1-1*01   11   -------------------------.....------------------------------------------------------------  15
J  88.1% (37/42)    IGHJ4*02     7    -------------------------------------------------...A...C............A.......C.........T..  47

                                       
                                       
                    Query_762    363  G  363
J  88.1% (37/42)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_230843

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           10.3    116  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAGGTTTCGATA	GGGGG	G	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAGGTTTCGATAGGGGGGGGTTCGACCCC	ARDRGFDRGGFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_763    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A......A..............................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  Y  Y  S  G  S  I  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  M  P  K  N 
                    Query_763    91   TGGATTGCGTATATCTATTACAGTGGGAGCATCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACATGCCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  .......G.......................C...C.....................................T.....C.T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  I  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  G  F  D  R  G  G  F 
                    Query_763    181  CAGATCTCCCTGAAGTTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATAGAGGTTTCGATAGGGGGGGGTTC  270
V  95.1% (233/245)  IGHV4-59*01  229  ...T...........C................T................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -------------------------------------------------------------------------------.....------  22
J  100.0% (45/45)   IGHJ5*02     7    -------------------------------------------------------------------------------------.....  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_763    271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (45/45)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_287655

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAAGG	CGGTTACTAC	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAAGGCGGTTACTACCCCTTTGACTAC	ARDKGGYYPFDY	237	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	233	224	9	0	96.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  G  T  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 
                    Query_764    12   TGTGCAGCCTCTGGATTCACCTTTGGTACCTTTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATA  101
V  96.1% (224/233)  IGHV3-7*03   64   ........................A...G..A..........................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       N  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  V  Y  L 
                    Query_764    102  AACCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAAAACTCAGTGTATCTG  191
V  96.1% (224/233)  IGHV3-7*03   154  ..G.......................................................................G......C........  243
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------CDR3-IMGT------------>         
                                       Q  M  N  G  L  R  G  E  D  T  A  L  Y  Y  C  A  R  D  K  G  G  Y  Y  P  F  D  Y  W  G  Q 
                    Query_764    192  CAAATGAACGGCCTGAGAGGCGAGGACACGGCCCTGTATTACTGTGCGAGAGATAAAGGCGGTTACTACCCCTTTGACTACTGGGGCCAG  281
V  96.1% (224/233)  IGHV3-7*03   244  .........A.........C.............G...................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  90.0% (9/10)     IGHD4-17*01  7    -----------------------------------------------------------....G.....---------------------  16
J  97.4% (38/39)    IGHJ4*02     5    -----------------------------------------------------------------------...................  23

                                                          
                                       G  T  P  V  T  V  S
                    Query_764    282  GGAACCCCGGTCACCGTCTC  301
J  97.4% (38/39)    IGHJ4*02     24   .......T............  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_287654

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_765    1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_765    91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_765    181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_765    271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_287657

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           37.2    9e-07
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCTT	CTATGATAGCAGTGGTTATTAC	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCTTCTATGATAGCAGTGGTTATTACCACTTTGACTAT	VVFYDSSGYYHFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	238	1	1	0	0	100
Total	N/A	N/A	238	226	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  A  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_766    1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGCCGCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.0% (226/238)  IGHV4-59*01  49   .......................C.......G.T........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_766    91   TGGATTGGTTATATCTATCACAGTGGGACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.0% (226/238)  IGHV4-59*01  139  ........G.........T.........G...............C.............................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  F  Y  D  S  S  G  Y  Y  H 
                    Query_766    181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGTGGTCTTCTATGATAGCAGTGGTTATTACCAC  270
V  95.0% (226/238)  IGHV4-59*01  229  ...................GC..........................G..T.......--------------------------------  286
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                                  
D  95.5% (21/22)    IGHD3-22*01  7    -----------------------------------------------------------------.........T............---  28
J  95.6% (43/45)    IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_766    271  TTTGACTATTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  313
J  95.6% (43/45)    IGHJ4*02     6    ........C.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_287656

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_767    1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_767    91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_767    181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_767    271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_287651

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           371     7e-105
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CCGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	AGPSSASGWHFDN	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	263	26	0	91


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_768    1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCAGTTA  90
V  91.0% (263/289)  IGHV5-51*03  6    .........................G.............G.........................G.........C.GC..T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  D  I  R  Y  S  P
                    Query_768    91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGATATTAGATATAGTCC  180
V  91.0% (263/289)  IGHV5-51*03  96   C.......G..................................................AT...GG...........CC.....C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  G
                    Query_768    181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACCCCGG  270
V  91.0% (263/289)  IGHV5-51*03  186  .............................C..A.AA........G........................................A...C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  G  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_768    271  CATGTATTACTGTGCGGGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  91.0% (263/289)  IGHV5-51*03  276  ................A..-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_287650

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           315     5e-88
IGHD6-13*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTGG	GCAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTGGGCAGCAGCTGACTGACTAC	ARDSGQQLTDY	276	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	275	147	111	3	33	75.5
CDR3-IMGT (germline)	276	283	8	8	0	0	100
Total	N/A	N/A	283	244	6	33	86.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_769    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  86.2% (244/283)  IGHV3-21*01  47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  S  S  H  I  Y  Y  A  D  S  V  K  G  R  F  T  Y  Y  A  D  S  V  
                    Query_769    91   AGTGGGTCTCATCCATTAGTGGTAGTAGTAGTCACATATATTACGCAGACTCAGTGAAGGGCCGATTCACCTATTACGCAGACTCAGTGA  180
V  86.2% (244/283)  IGHV3-21*01  137  ....................A...........T.......C...---------------------------------.............  193
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y                                   A  D  S  V  

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                      K  G  R  F  T  I  S  R  D  D  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  
                    Query_769    181  AGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATT  270
V  86.2% (244/283)  IGHV3-21*01  194  ..........................A..........................................................G....  283
                                      K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-----------CDR3-IMGT----------->                                  
                                      Y  C  A  R  D  S  G  Q  Q  L  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_769    271  ACTGTGCGAGAGATTCTGGGCAGCAGCTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
V  86.2% (244/283)  IGHV3-21*01  284  .............-----------------------------------------------------------  296
                                      Y  C  A  R                                                              
D  100.0% (10/10)   IGHD6-13*01  8    -------------------..........-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_287653

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           311     5e-87
IGHD3-10*02                                                                                           18.0    0.68 
IGHJ4*02                                                                                              58.4    1e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGAC	GCGAGAGTCGAGGACACGGCTATC	TATTACTGTGTT	AGAGGTACACAGCAATGGGCCGGAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTATCTATTACTGTGTTAGAGGTACACAGCAATGGGCCGGAATTGACTAT	AIYYCVRGTQQWAGIDY	291	341	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	66	8	0	89.2
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	42	9	0	82.4
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	272	96	84	12	0	87.5
Total	N/A	N/A	269	234	35	0	87


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  R  R  P  G  E  S  L  R  I  S  C  K  I  S  G  Y  S  F  T  
                    Query_770    4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAGACCCGGGGAGTCTCTGAGAATCTCCTGTAAGATTTCTGGATACAGCTTTACCA  93
V  87.0% (234/269)  IGHV5-51*01  2    ..G..............................A..AG................AG............GG....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  H  W  V  R  Q  V  P  G  K  E  L  E  W  M  G  S  I  Y  P  G  N  S  D  T  R  G  
                    Query_770    94   ATTACTGGATTCATTGGGTGCGCCAGGTGCCCGGGAAAGAACTGGAGTGGATGGGGAGTATATATCCAGGGAACTCTGATACCAGAGGCA  183
V  87.0% (234/269)  IGHV5-51*01  92   GC........CGGC............A............GC................TC..C.....T..TG..............TA..  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  H  V  T  L  S  V  D  T  S  S  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_770    184  GCCCATCGTTCCAAGGCCACGTCACCCTCTCAGTTGACACCTCCAGCAGCACCGCCTACCTTCAGTGGAGCAGCCTGAAGGCCTCGGACG  273
V  87.0% (234/269)  IGHV5-51*01  182  ....G..C...........G......A......CC....AG....T...............G...........................-  270
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      A  R  V  E  D  T  A  I  Y  Y  C  V  R  G  T  Q  Q  W  A  G  I  D  Y  W  G  Q  G  T  Q  V  
                    Query_770    274  CGAGAGTCGAGGACACGGCTATCTATTACTGTGTTAGAGGTACACAGCAATGGGCCGGAATTGACTATTGGGGCCAGGGAACGCAGGTCA  363
D  91.7% (11/12)    IGHD3-10*02  2    -----------------------.......A....-------------------------------------------------------  13
J  90.5% (38/42)    IGHJ4*02     7    ------------------------------------------------------------.......C..............C.T.....  36

                                                  
                                      T  V  S  S  
                    Query_770    364  CTGTCTCCTCAG  375
J  90.5% (38/42)    IGHJ4*02     37   .C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_287652

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           315     5e-88
IGHD5-12*01                                                                                           12.2    33   
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCTTTTC	CTACGA	AGATCCCAGAGAGGACCTCC	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCTTTTCCTACGAAGATCCCAGAGAGGACCTCCACTATGGTTTGGACGTC	ARAFSYEDPREDLHYGLDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	224	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  R  F  T  F  R  N  Y  D  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_771    1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTAGATTCACCTTCAGGAACTACGATATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  90.7% (224/247)  IGHV3-30*03  47   .....................C..C....G.............T.G...T.GC................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  S  F  D  G  R  N  K  Y  Y  A  D  S  V  N  V  R  F  I  I  S  R  D  N  S  
                    Query_771    91   AGTGGGTGGCTGGCATATCATTTGATGGAAGAAATAAATACTATGCAGACTCCGTCAACGTCCGATTCATTATCTCCAGAGACAATTCCA  180
V  90.7% (224/247)  IGHV3-30*03  137  ..........A.TT.......A.........T.......................G..G.G........CC...................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  M  F  Y  C  A  R  A  F  S  Y  E  D  P  
                    Query_771    181  AGAACACCCTGTATCTGCAGATGAACAGCCTGAGAGCTGAGGACACGGCTATGTTTTACTGTGCGAGGGCCTTTTCCTACGAAGATCCCA  270
V  90.7% (224/247)  IGHV3-30*03  227  .......G...........A..............................G...A............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD5-12*01  14   ----------------------------------------------------------------------------......--------  19

                                      -IMGT----------------------->                                 
                                      R  E  D  L  H  Y  G  L  D  V  W  G  L  G  T  S  V  I  V  S  S 
                    Query_771    271  GAGAGGACCTCCACTATGGTTTGGACGTCTGGGGCCTAGGGACCTCGGTCATCGTCTCCTCA  332
J  90.0% (45/50)    IGHJ6*02     13   ------------....C...A...............A.......A......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_57235

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           335     4e-94
IGHD5-12*01                                                                                           18.0    0.60 
IGHJ2*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGAAATGTATGAT	TATAGTGGC	ACAATATAT	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGAAATGTATGATTATAGTGGCACAATATATTGGTACTTCGATCTC	ARQEMYDYSGTIYWYFDL	246	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  M  S  S  R  S  Y  P  W  G  W  V  R  Q  P  P  R  K  G  
                    Query_772    4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATGAGCAGTAGGAGCTACCCCTGGGGCTGGGTCCGCCAGCCCCCACGGAAGGGGC  93
V  92.8% (232/250)  IGHV4-39*01  50   .....TCC...A.........................C........T..T...TA..........A..............G.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  T  I  Y  N  S  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  H  T  S  
                    Query_772    94   TGGAGTGGATTGGGACTATCTATAATAGTGGGAGGACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTACACACGTCGA  183
V  92.8% (232/250)  IGHV4-39*01  140  ...............G.......T..........C.............................................G.......C.  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      N  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  E  M  Y  D  Y  S  
                    Query_772    184  ACAACCAGTTCTCCCTGCAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACAAGAAATGTATGATTATAGTG  273
V  92.8% (232/250)  IGHV4-39*01  230  .G...............A....................................................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD5-12*01  6    -----------------------------------------------------------------------------------.......  12

                                      IMGT--------------------->                                  
                                      G  T  I  Y  W  Y  F  D  L  W  G  R  G  S  L  V  T  V  S  S  
                    Query_772    274  GCACAATATATTGGTACTTCGATCTCTGGGGCCGTGGCTCCCTGGTCACTGTCTCCTCAG  333
D  100.0% (9/9)     IGHD5-12*01  13   ..----------------------------------------------------------  14
J  98.0% (48/49)    IGHJ2*01     5    -----------...........................A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_85791

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           388     5e-110
IGHD3-16*01                                                                                           43.0    2e-08 
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCTAGTCTGGAA	TATGATTACGTTTGGGGGAGTT	CTCCCCTCAC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCTAGTCTGGAATATGATTACGTTTGGGGGAGTTCTCCCCTCACCTGGTTCGACCCC	AREASLEYDYVWGSSPLTWFDP	261	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	22	2	0	91.7
FR2-IMGT	75	125	51	51	0	0	100
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	110	4	0	96.5
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	258	10	0	96.3


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  R  T  V  S  G  A  S  I  T  S  Y  Y  W  S  W  I  R  
                    Query_773    1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCCGCACTGTCTCTGGTGCCTCCATCACTAGTTACTACTGGAGCTGGATCCGGC  90
V  96.3% (258/268)  IGHV4-59*01  26   ................T.....................T...............G........G..........................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  M  Y  Y  T  G  S  T  K  Y  N  P  S  L  R  S  R  V  T  
                    Query_773    91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATGTATTACACTGGGAGCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCACCA  180
V  96.3% (258/268)  IGHV4-59*01  116  .....................................C.......G............C................A..............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  E  
                    Query_773    181  TATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGAGCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAAG  270
V  96.3% (258/268)  IGHV4-59*01  206  ......................................C............C....................................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -------------------CDR3-IMGT--------------------------->                                  
                                      A  S  L  E  Y  D  Y  V  W  G  S  S  P  L  T  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_773    271  CTAGTCTGGAATATGATTACGTTTGGGGGAGTTCTCCCCTCACCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  360
D  100.0% (22/22)   IGHD3-16*01  5    -----------......................---------------------------------------------------------  26
J  100.0% (47/47)   IGHJ5*02     5    -------------------------------------------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_57236

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           378     3e-107
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGCG	GCCCT	TATCGCAGC	CTCTCATCTCACAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATCTCACATACTAC	AALIAASHLTYY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	264	22	0	92.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_774    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  92.3% (264/286)  IGHV5-51*01  6    ..............................A...................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  Q  G  L  E  L  M  G  L  I  Y  P  G  Y  S  D  T  W  Y  S  P
                    Query_774    91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCAAGGCCTGGAGTTGATGGGGCTCATCTATCCTGGCTACTCTGATACCTGGTACAGTCC  180
V  92.3% (264/286)  IGHV5-51*01  96   ......................A........A............G.......A.............TG...........A.A.....C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  T  S  A  Y  L  Q  W  T  T  L  K  A  S  D  A  A
                    Query_774    181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCACCTCCGCCTACCTGCAGTGGACCACCCTGAAGGCCTCGGACGCCGC  270
V  92.3% (264/286)  IGHV5-51*01  186  ....................C...................A...G.A..................G..G................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  W  A  A  L  I  A  A  S  H  L  T  Y  Y  W  G  Q  G  A  L  V  S  V  S  S  
                    Query_774    271  CATTTACTACTGGGCGGCCCTTATCGCAGCCTCTCATCTCACATACTACTGGGGCCAGGGGGCCCTGGTCTCCGTCTCCTCAG  353
V  92.3% (264/286)  IGHV5-51*01  276  ...G..T.....T...-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  92.3% (36/39)    IGHJ4*02     10   --------------------------------------------................AA........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_31426

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         357     1e-100
IGHD1-26*01                                                                                           12.2    31    
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	TATAGCGGG	GGGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTATAGCGGGGGGGGCTTTGACTAC	ARDYSGGGFDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_775      1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGCTATGCAGTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-30-3*01  47   ..............................................C...........C...............................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_775      91   AGTGGGTGGCAGTTATATCATATGATGGAAGCAACAAATACTACACAGACTCCGTGAAGGGCCGATTCACCATCTCGAGAGACAATTCCA  180
V  95.6% (239/250)  IGHV3-30-3*01  137  ..................................T.........G...............................C.............  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                        K  N  K  V  Y  L  Q  M  D  S  L  R  V  E  D  T  A  L  Y  Y  C  A  R  D  Y  S  G  G  G  F  
                    Query_775      181  AGAACAAGGTATATCTGCAAATGGACAGCCTGAGAGTTGAGGACACGGCTTTGTATTACTGTGCGAGAGACTATAGCGGGGGGGGCTTTG  270
V  95.6% (239/250)  IGHV3-30-3*01  227  ......C.C.G............A............C.............G...................--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD1-26*01    3    -----------------------------------------------------------------------.....T...----------  11
J  100.0% (44/44)   IGHJ4*02       5    -------------------------------------------------------------------------------------.....  9

                                        ---->                                  
                                        D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_775      271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (44/44)   IGHJ4*02       10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_57230

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           341     5e-96
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARGDCSSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  F  G  G  S  I  S  G  Y  Y  Y  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_776    1    ACCCTGTCCCTCACCTGCACTGTGTTTGGTGGCTCCATCAGTGGTTACTACTACAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (231/244)  IGHV4-59*01  49   .......................C.C................A.........GG....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  N  N 
                    Query_776    91   TGGATTGGATATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCCAACAAT  180
V  94.7% (231/244)  IGHV4-59*01  139  ........G...............................................................G.............G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  G  D  C  S  S  T  S  C  Y 
                    Query_776    181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGGGGACTGTAGTAGCACCAGCTGCTAC  270
V  94.7% (231/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD2-2*01   8    ---------------------------------------------------------------------........T........----  24
J  88.5% (46/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_776    271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  318
J  88.5% (46/52)    IGHJ6*02     15   ...GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_57233

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           227     9e-62
IGHD2-15*01                                                                                           12.2    31   
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TGGTGG	CGGACGGGGGCTCGATTGGGGTGCGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTGGCGGACGGGGGCTCGATTGGGGTGCGGTGGTTCGACACC	ARLVADGGSIGVRWFDT	225	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	14	2	2	0	0	100
CDR1-IMGT	15	38	24	20	4	0	83.3
FR2-IMGT	39	89	51	42	9	0	82.4
CDR2-IMGT	90	110	21	15	6	0	71.4
FR3-IMGT	111	224	114	96	18	0	84.2
CDR3-IMGT (germline)	225	231	7	7	0	0	100
Total	N/A	N/A	219	182	37	0	83.1


Alignments

                                        <-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-----CDR2-IM
                                         G  A  S  I  R  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  T  L  E  W  I  G  Y  F  F  H  T  
                    Query_777    13   CTGGTGCCTCCATTAGAAGTTATTACTGGAGTTGGGTTCGCCAGCCCCCCGGCAAGACACTGGAGTGGATTGGCTATTTCTTTCACACCG  102
V  83.1% (182/219)  IGHV4-59*08  74   ......G......C..T.....C........C...A.C..G........A..G...GG...............G...A...A.T...GT.  163
                                         G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  

                                      GT-----><----------------------------------------------------FR3-IMGT---------------------
                                      G  T  T  N  Y  H  P  S  L  K  S  R  V  T  I  S  S  D  T  S  K  N  I  F  S  L  T  L  T  S  
                    Query_777    103  GGACCACCAATTACCATCCCTCCCTCAAGAGTCGAGTCACCATTTCATCAGACACGTCCAAGAACATCTTCTCATTGACTCTGACGTCTG  192
V  83.1% (182/219)  IGHV4-59*08  164  ...G......C...A.C..........................A...GT................CAG.....CC...AG....GC....  253
                                      G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  

                                      -------------------------------><--------------------CDR3-IMGT-------------------->       
                                      V  T  A  A  D  T  A  V  Y  F  C  A  R  L  V  A  D  G  G  S  I  G  V  R  W  F  D  T  W  G  
                    Query_777    193  TGACCGCCGCAGACACGGCCGTCTATTTTTGTGCGAGACTGGTGGCGGACGGGGGCTCGATTGGGGTGCGGTGGTTCGACACCTGGGGCC  282
V  83.1% (182/219)  IGHV4-59*08  254  ......................G....AC..........---------------------------------------------------  292
                                      V  T  A  A  D  T  A  V  Y  Y  C  A  R                                                     
D  100.0% (6/6)     IGHD2-15*01  13   ---------------------------------------......---------------------------------------------  18
J  91.3% (42/46)    IGHJ5*02     6    -----------------------------------------------------------------------.........C.........  24

                                                                 
                                      Q  G  T  L  V  S  V  S  S  
                    Query_777    283  AGGGAACGCTGGTCAGCGTCTCATCAG  309
J  91.3% (42/46)    IGHJ5*02     25   .......C.......C......C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_57232

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGGG	AGCAATGGCTGG	GGAAGGTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTATGGACGCC	ARGHRGSNGWGRYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	228	17	6	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_778    1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCAGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  90.8% (228/251)  IGHV4-34*01  49   .......................C..T................------....C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  H  R  G  G  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_778    91   CTGGAATGGATTGGGGAAATCATTCATCGTGGAGGCACCAACTACAACCCGTCCCTCCAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  90.8% (228/251)  IGHV4-34*01  133  .....G................A....A.....A.......................A................................  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  G  S  N  G 
                    Query_778    181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGGGAGCAATGGC  270
V  90.8% (228/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  R  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_778    271  TGGGGAAGGTACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  93.8% (45/48)    IGHJ6*02     15   ------------------.............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_280386

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           297     7e-83
IGHD3-9*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGACCCA	TACGGTATTTTG	GCTATTGAGAAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGTGACCCATACGGTATTTTGGCTATTGAGAAG	ATGDPYGILAIEK	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	42	9	0	82.4
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  N  Y  W  S  W  I  R  Q  S  P  A  K  G 
                    Query_779    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGCCAACTACTGGAGTTGGATCCGCCAATCCCCTGCAAAGGGC  90
V  88.0% (220/250)  IGHV4-31*03  49   .................................................GTT..........C...........GCA...A.GG......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  T  T  E  Y  N  P  S  L  K  S  R  L  T  M  S  I  D  P  S 
                    Query_779    91   CTCGAGTGGATTGGATACATCTATTATGGTGGGACCACCGAGTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCCATTGACCCGTCT  180
V  88.0% (220/250)  IGHV4-31*03  139  ..G...........G...........CA......G....T.C...........C............G.T.....A..AG.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       T  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  D  P  Y  G  I  L 
                    Query_779    181  ACGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGTGACCCATACGGTATTTTG  270
V  88.0% (220/250)  IGHV4-31*03  229  .A...................C...G...........................G.............G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD3-9*01   5    ------------------------------------------------------------------------------....A.......  16

                                      ----------->                                
                                       A  I  E  K  W  G  Q  G  T  L  V  T  V  S  S
                    Query_779    271  GCTATTGAGAAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
J  100.0% (32/32)   IGHJ4*02     15   ------------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_280385

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           434     4e-124
IGHD6-6*01                                                                                            19.9    0.18  
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CGGA	AGTATAGGTGCTCGTC	T	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACGGAAGTATAGGTGCTCGTCTCAACTGGTTCGACCCC	ARHGSIGARLNWFDP	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	72	3	0	96
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	112	2	0	98.2
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	287	9	0	97


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S 
                    Query_780    4    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACAGCTTTAGC  93
V  97.0% (287/296)  IGHV5-51*01  1    .....G........G........................................................T................C.  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  A  D  S  D  T  R  Y 
                    Query_780    94   AGCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAGGGCCTGGAGTGGATGGGGATCATCTTTCCTGCTGACTCTGATACCAGATAC  183
V  97.0% (287/296)  IGHV5-51*01  91   ......................................A.........................A.....G...................  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D 
                    Query_780    184  AGCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGAC  273
V  97.0% (287/296)  IGHV5-51*01  181  .................................................G........................................  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       S  A  M  Y  Y  C  A  R  H  G  S  I  G  A  R  L  N  W  F  D  P  W  G  Q  G  T  L  V  T  V 
                    Query_780    274  AGCGCCATGTATTACTGTGCGAGACACGGAAGTATAGGTGCTCGTCTCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTC  363
V  97.0% (287/296)  IGHV5-51*01  271  .C........................----------------------------------------------------------------  296
                                       T  A  M  Y  Y  C  A  R                                                                   
D  87.5% (14/16)    IGHD6-6*01   2    ------------------------------.......CA.......--------------------------------------------  17
J  100.0% (50/50)   IGHJ5*02     2    -----------------------------------------------...........................................  44

                                             
                                       S  S  
                    Query_780    364  TCCTCAG  370
J  100.0% (50/50)   IGHJ5*02     45   .......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_57239

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           318     6e-89
IGHD6-6*01                                                                                            14.1    8.3  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGG	AGCAGTTCGT	AGATTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGGAGCAGTTCGTAGATTTCTACGGTTTGGACGTC	AKGEQFVDFYGLDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_781    1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTCAGCAACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-23*01  47   .....................C..................T....G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  L  S  S  G  G  G  I  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_781    91   AGTGGGTCTCAACTCTAAGTAGCGGTGGTGGAATTACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATTTCCAGAGACAATTCCG  180
V  90.8% (226/249)  IGHV3-23*01  137  ...........G..A.T...G.TA.......T.GC......................................C...............A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      E  S  T  L  Y  L  Q  M  M  S  L  R  V  E  D  T  A  V  Y  F  C  A  K  G  E  Q  F  V  D  F  
                    Query_781    181  AGAGCACTTTGTATCTGCAAATGATGAGCCTGAGAGTCGAGGACACGGCCGTTTATTTCTGTGCGAAAGGGGAGCAGTTCGTAGATTTCT  270
V  90.8% (226/249)  IGHV3-23*01  227  ...A...GC...............AC..........C...............A....A...........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (9/10)     IGHD6-6*01   7    ------------------------------------------------------------------------.....C....--------  16
J  95.6% (43/45)    IGHJ6*02     14   ----------------------------------------------------------------------------------------..  15

                                      ------------->                             
                                      Y  G  L  D  V  W  G  Q  G  T  T  V  A  V  S
                    Query_781    271  ACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTC  313
J  95.6% (43/45)    IGHJ6*02     16   .....A.............................A.......  58


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_57238

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            353     9e-100
IGHD5-18*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAA	TCCTCGGGA	GATACACCTATGG	CCGGATCAAC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAATCCTCGGGAGATACACCTATGGCCGGATCAACCTTTGACCAC	AKSSGDTPMAGSTFDH	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  F  A  M  Y  W  V  R  Q  G  P  G  K  G  L  
                    Query_782    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTTTGCCATGTATTGGGTCCGGCAAGGTCCAGGGAAGGGCCTGG  90
V  95.6% (237/248)  IGHV3-9*01   47   ................................................A.......C.C.............C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  D  I  S  W  N  S  G  F  I  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_782    91   AGTGGGTCTCAGATATTAGTTGGAATAGTGGTTTCATAGACTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (237/248)  IGHV3-9*01   137  ............G...................AG.....G..................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  K  S  S  G  D  T  P  M  
                    Query_782    181  GGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGTTGAGGACACGGCCTTATATTACTGTGCAAAATCCTCGGGAGATACACCTATGG  270
V  95.6% (237/248)  IGHV3-9*01   227  A...................................C...............G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  92.3% (12/13)    IGHD5-18*01  4    -----------------------------------------------------------------------------......G......  16

                                      T------------------>                                  
                                      A  G  S  T  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_782    271  CCGGATCAACCTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.7% (43/44)    IGHJ4*02     5    ----------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_280380

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	AGESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_783    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_783    91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  92.8% (232/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  G  E  S  F  L  D  S  S  
                    Query_783    181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGGGAGAAAGTTTCTTGGATAGTAGTG  270
V  92.8% (232/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G............A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_783    271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_64509

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD5-12*01                                                                                           10.3    133   
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	GTGGC	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGGCAACTACAACTACTACGCTATGGACGTC	ARRGNYNYYAMDV	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  L  T  S  H
                    Query_784    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTAACCAGCCA  90
V  94.8% (275/290)  IGHV5-51*01  6    ...............................A.................................................T......T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  H  P  R  D  S  D  T  R  Y  S  P
                    Query_784    91   TTGGATCGCCTGGGTGCGCCAGATGCCAGGGAAAGGCCTGGAGTGGATGGGGATCATCCATCCTCGTGACTCTGATACCAGATACAGCCC  180
V  94.8% (275/290)  IGHV5-51*01  96   C.......G..................C..............................T.....G.........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  G  Q  V  T  M  S  V  N  K  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_784    181  GCCCTTCCAAGGCCAGGTCACCATGTCAGTCAACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (275/290)  IGHV5-51*01  186  .T......................C....C.G.....................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                 
                                        S  Y  Y  C  A  R  R  G  N  Y  N  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  T  F  S  S 
                    Query_784    271  CAGCTATTACTGTGCGAGACGTGGCAACTACAACTACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCTTCTCCTCA  355
V  94.8% (275/290)  IGHV5-51*01  276  ..TG................-----------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD5-12*01  10   --------------------.....------------------------------------------------------------  14
J  94.9% (56/59)    IGHJ6*02     4    --------------------------.....T.........G..................................G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_64508

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD6-13*01                                                                                           14.1    9.8   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGCG	GCAACACCTGGTA	TCGAGATTCTCAGGCCGGCAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGCGGCAACACCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGAC	ARHSGNTWYRDSQAGIYFDD	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  G  G  Y
                    Query_785    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCCCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCGGCTA  90
V  94.8% (276/291)  IGHV5-51*01  6    .............................................T....................................AC.A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_785    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAACCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ......................................................................................G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  R  S  L  G  T  A  Y  L  Q  W  P  S  L  K  A  S  D  T  A
                    Query_785    181  GTCCTTTCAAGGACAGGTCACCATCTCAGTCGACAGGTCCCTCGGAACCGCCTACCTGCAGTGGCCCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  ......C.....C................C.....A....A..A.C..................AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  Y  C  A  R  H  S  G  N  T  W  Y  R  D  S  Q  A  G  I  Y  F  D  D  W  G  Q  G  T  L
                    Query_785    271  CATGTACTACTGTGCGAGACACAGCGGCAACACCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGACTGGGGCCAGGGAACCCT  360
V  94.8% (276/291)  IGHV5-51*01  276  ......T..............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  84.6% (11/13)    IGHD6-13*01  8    --------------------------...G..G......---------------------------------------------------  20
J  95.7% (45/47)    IGHJ4*02     2    ------------------------------------------------------------......T...T...................  31

                                                       
                                        V  T  V  S  S  
                    Query_785    361  GGTCACCGTCTCCTCAG  377
J  95.7% (45/47)    IGHJ4*02     32   .................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_28709

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGCCTACTTTCTTAGTTGGGGTTACTCTGGTA	GTATAACAGCAGCTGG	CGAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTAC	ARHAYFLSWGYSGSITAAGEIDY	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	283	8	0	97.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  A  T  Y
                    Query_786    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTGCCACCTA  90
V  97.3% (283/291)  IGHV5-51*01  6    ....................................C........................................G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_786    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  97.3% (283/291)  IGHV5-51*01  96   ............................................................................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  A  G  T  A
                    Query_786    181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCGCGGGCACCGC  270
V  97.3% (283/291)  IGHV5-51*01  186  .........................................................................A.....T...A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        M  Y  Y  C  A  R  H  A  Y  F  L  S  W  G  Y  S  G  S  I  T  A  A  G  E  I  D  Y  W  G  Q
                    Query_786    271  CATGTATTACTGTGCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTACTGGGGCCA  360
V  97.3% (283/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  93.8% (15/16)    IGHD6-13*01  3    -----------------------------------------------------.....G..........---------------------  18
J  100.0% (42/42)   IGHJ4*02     7    --------------------------------------------------------------------------................  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_786    361  GGGAACCCTGGTCACCGTCTCCTCAG  386
J  100.0% (42/42)   IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_28708

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           343     2e-96
IGHD3-3*01                                                                                            21.8    0.047
IGHJ4*02                                                                                              58.4    1e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGGA	TTTTGGAGTGG	AGGACTCTGGAGTGGTCCGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGGATTTTGGAGTGGAGGACTCTGGAGTGGTCCGCCTTGACTAC	ARVDFGVEDSGVVRLDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	95	19	0	83.3
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	253	34	0	88.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  T  S  G  Y  P  F  R  N  Y 
                    Query_787    2    CAGCTGGTGCAGTCTGGAGCTGAGGTTAAGAAGCCTGGCGCCTCAGTGAAGGTCGCCTGCAAGACTTCTGGTTACCCCTTTAGGAATTAC  91
V  88.2% (253/287)  IGHV1-18*04  7    ..........................G...........G...............T........G...........A......CC.GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  G  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  E 
                    Query_787    92   GGTGTCGGTTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGGAACACAAACTATGCAGAG  181
V  88.2% (253/287)  IGHV1-18*04  97   ...A..A.C..........................G.........................C.........T...............C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  F  E  D  R  V  T  M  I  T  H  T  S  T  T  T  V  F  M  E  L  R  G  L  R  Y  D  D  T  A 
                    Query_787    182  AATTTCGAGGACAGAGTCACAATGATCACACACACCTCCACGACCACAGTGTTCATGGAACTGAGGGGGCTGAGATATGACGACACGGCC  271
V  88.2% (253/287)  IGHV1-18*04  187  ..GC..C...G.........C....C....G....A.......G.....CC.A......G......A.C.......C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------CDR3-IMGT-------------------->                           
                                       V  Y  C  C  A  R  V  D  F  G  V  E  D  S  G  V  V  R  L  D  Y  W  G  Q  G  A  L  V  S  F 
                    Query_787    272  GTCTATTGCTGTGCGAGGGTGGATTTTGGAGTGGAGGACTCTGGAGTGGTCCGCCTTGACTACTGGGGCCAGGGAGCCCTGGTCAGCTTC  361
V  88.2% (253/287)  IGHV1-18*04  277  ..G....A.........-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  100.0% (11/11)   IGHD3-3*01   11   -----------------------...........--------------------------------------------------------  21
J  90.5% (38/42)    IGHJ4*02     7    -------------------------------------------------------....................A.........C.G..  41

                                             
                                       S  S  
                    Query_787    362  TCGTCAG  368
J  90.5% (38/42)    IGHJ4*02     42   ..C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_28707

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           385     5e-109
IGHD3-22*01                                                                                           18.0    0.67  
IGHJ3*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAAAGAAACA	TATTCCTATGACAGT	GGCAGTGGAC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAAAGAAACATATTCCTATGACAGTGGCAGTGGACCTTTTGATATC	ARGKETYSYDSGSGPFDI	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_788    1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCTCCAGTTA  90
V  92.4% (268/290)  IGHV1-69*06  6    ..................G...............................................................AG...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  V  P  M  F  P  T  A  D  S  P  E
                    Query_788    91   TGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCGTACCTATGTTTCCAACAGCAGACTCCCCCGA  180
V  92.4% (268/290)  IGHV1-69*06  96   ........G.................................................A.C.....C...GGT......A...A.G.AC.  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  E  D  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_788    181  GAAGTTCGAGGACAGAGTCACGATTACCGCGGACAAATCAACGAGCACAGCCTACATGGAACTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  92.4% (268/290)  IGHV1-69*06  186  .......C...G...........................C....................G.............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  G  K  E  T  Y  S  Y  D  S  G  S  G  P  F  D  I  W  G  Q  G  T  M  V  T
                    Query_788    271  CATGTATTATTGTGCGAGAGGGAAAGAAACATATTCCTATGACAGTGGCAGTGGACCTTTTGATATCTGGGGCCAAGGGACAATGGTCAC  360
V  92.4% (268/290)  IGHV1-69*06  276  .G.......C..........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  86.7% (13/15)    IGHD3-22*01  2    -------------------------------....A......T...--------------------------------------------  16
J  100.0% (45/45)   IGHJ3*02     6    --------------------------------------------------------..................................  39

                                                 
                                        V  S  S  
                    Query_788    361  CGTCTCTTCAG  371
J  100.0% (45/45)   IGHJ3*02     40   ...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_64504

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           327     8e-92
IGHD2-2*02                                                                                            10.3    115  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-2*02	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GCG	ATACC	GTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGCGATACCGTATTTGACCAC	ARGDTVFDH	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  F  T  *  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_789    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTAGCTTCTTTACCTAATGGATGAACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-74*01  47   ..................................C.C....AG..G...C......C.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  L  V  A  R  I  D  R  D  G  R  I  T  S  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_789    91   TGTTGGTCGCACGTATTGATAGAGATGGGAGAATCACAAGCTTCGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.0% (229/249)  IGHV3-74*01  137  ...G....T........A....T........T.G........A...............................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      R  D  T  L  Y  L  Q  M  D  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  G  D  T  V  F  D  H  
                    Query_789    181  GGGACACGCTTTATCTGCAAATGGACAGTCTGAGAGGCGAGGACACGGCTGTGTATTATTGTGCAAGAGGCGATACCGTATTTGACCACT  270
V  92.0% (229/249)  IGHV3-74*01  227  A.A.......G............A............C.....................C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-2*02   27   ------------------------------------------------------------------------.....-------------  31
J  97.7% (42/43)    IGHJ4*02     6    --------------------------------------------------------------------------------......T...  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_789    271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  97.7% (42/43)    IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_28705

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           310     1e-86
IGHD2-21*02                                                                                           33.4    1e-05
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTCCCCAAAA	ATTGTGGTGGTGACTGC	CCCTGC	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTCCCCAAAAATTGTGGTGGTGACTGCCCCTGCGACGAC	AKDLPKNCGGDCPCDD	234	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	233	114	98	7	9	86
CDR3-IMGT (germline)	234	241	8	8	0	0	100
Total	N/A	N/A	250	226	15	9	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_790    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAAGGGCTGG  90
V  90.4% (226/250)  IGHV3-30*18  47   ..................................................................................G.......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  A  Y  D  G  G  K  K  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  K  S  
                    Query_790    91   AGTGGGTGGCATCTATTGCATATGATGGAGGAAAAAAATACTATGCGGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAAATCC-  179
V  90.4% (226/250)  IGHV3-30*18  137  ...........GT...AT...........A.T..T...........A..........A...........................T...A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                               L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  F  C  A  K  D  L  P  K  N  C  G  
                    Query_790    180  --------CTGTATCTGCAGATGAACAGCCTGAGACCTGAAGACACGGCTGTGTATTTCTGTGCGAAAGATCTCCCCAAAAATTGTGGTG  261
V  90.4% (226/250)  IGHV3-30*18  227  AGAACACG...........A...............G....G................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (17/17)   IGHD2-21*02  6    ---------------------------------------------------------------------------------.........  14

                                      T------------------>                                  
                                      G  D  C  P  C  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_790    262  GTGACTGCCCCTGCGACGACTGGGGTCAGGGAACCCTGGTCACCGTCTCCTCAG  315
D  100.0% (17/17)   IGHD2-21*02  15   ........----------------------------------------------  22
J  95.0% (38/40)    IGHJ4*02     9    --------------...T.......C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_64501

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            343     2e-96
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGATGAA	TCGGGGAG	GCCC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGATGAATCGGGGAGGCCCCTATTATTACTACGGCATGGACGTC	ARVMNRGGPYYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  L  S  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_791    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCCTTAGTAGTTACTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-7*03   47   ...................................A..T.......C..T.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  K  H  Y  V  D  S  V  Q  G  R  F  T  V  S  R  D  N  A  
                    Query_791    91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGAGAAACACTATGTGGACTCTGTGCAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  94.0% (234/249)  IGHV3-7*03   137  ....................C.................T.................A..............A..................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  I  L  Q  M  S  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  V  M  N  R  G  G  P  
                    Query_791    181  AGAATTCACTGATTCTGCAAATGAGTAGCCTGAGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGTGATGAATCGGGGAGGCCCCT  270
V  94.0% (234/249)  IGHV3-7*03   227  ....C......TA...........AC..........C................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-10*01  14   ----------------------------------------------------------------------------........------  21
J  94.8% (55/58)    IGHJ6*02     5    ----------------------------------------------------------------------------------------..  6

                                      GT-------------------->                                 
                                      Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_791    271  ATTATTACTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  94.8% (55/58)    IGHJ6*02     7    .C..C........T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_28702

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           297     7e-83
IGHD3-10*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	TGCCCCTGAC	GTATTAGTCCGGTTCGGGGAG	CCTCTCCTAAGTAGAGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATGCCCCTGACGTATTAGTCCGGTTCGGGGAGCCTCTCCTAAGTAGAGGTTTTGATATC	ANAPDVLVRFGEPLLSRGFDI	241	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	22	4	0	84.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	126	24	19	5	0	79.2
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	244	217	27	0	88.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  D  N  Y  A  L  T  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_792    2    CCCTGTCCCTCACCTGTGCAGCCTCTGGATTTACGTTTGACAACTATGCCTTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  88.9% (217/244)  IGHV3-23*01  50   .....AGA...T...................C..C...AG..G.......A...G...................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  S  I  S  G  S  G  S  Y  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_792    92   GGGTCTCAAGTATTAGTGGTAGTGGAAGTTATACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATTTCCAGGGACAATTCCAAGA  181
V  88.9% (217/244)  IGHV3-23*01  140  ........GC...............TG..AGC......................................C.....A.............  229
                                      W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------------------CDR3
                                      N  T  L  A  L  Q  M  S  S  L  S  A  E  D  T  A  L  Y  Y  C  A  N  A  P  D  V  L  V  R  F  
                    Query_792    182  ATACCCTGGCTCTGCAAATGAGCAGCCTGAGCGCCGAGGACACGGCCTTATATTACTGTGCGAATGCCCCTGACGTATTAGTCCGGTTCG  271
V  88.9% (217/244)  IGHV3-23*01  230  .C..G...TA...........A.........A...............G................--------------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  85.7% (18/21)    IGHD3-10*01  1    --------------------------------------------------------------------------......C.AT......  16

                                      -IMGT-------------------------->                                  
                                      G  E  P  L  L  S  R  G  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_792    272  GGGAGCCTCTCCTAAGTAGAGGTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  337
D  85.7% (18/21)    IGHD3-10*01  17   .....-------------------------------------------------------------  21
J  100.0% (44/44)   IGHJ3*02     7    ----------------------............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_28701

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-2*02                                                                                            44.9    5e-09 
IGHJ5*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAACC	ATATTGTAGTAGTTCCAGCTGCTATA	N/A	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAACCATATTGTAGTAGTTCCAGCTGCTATATGGTTCGACCCC	ARGNHIVVVPAAIWFDP	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_793    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_793    91   CTGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAATTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T..................................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  N  H  I  V  V  V 
                    Query_793    181  AAGAATCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGAACCATATTGTAGTAGTT  270
V  98.4% (246/250)  IGHV4-31*03  229  .....C....................C...........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  96.2% (25/26)    IGHD2-2*02   4    ----------------------------------------------------------------------------.............A  17

                                      MGT-------------------->                                  
                                       P  A  A  I  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_793    271  CCAGCTGCTATATGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  96.2% (25/26)    IGHD2-2*02   18   ............----------------------------------------------  29
J  100.0% (46/46)   IGHJ5*02     6    ------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_64502

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_794    1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_794    91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_794    181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  P  A  V  S  V  P  S
                    Query_794    271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGCCCGCGGTCTCCGTCCCCTC  335
D  91.7% (11/12)    IGHD6-19*01  16   ...--------------------------------------------------------------  18
J  87.2% (41/47)    IGHJ6*02     15   ------------------.....T.......T.............A..A.....A.....T....  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_17518

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           388     5e-110
IGHD3-16*01                                                                                           43.0    2e-08 
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCTAGTCTGGAA	TATGATTACGTTTGGGGGAGTT	CTCACCTCAC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCTAGTCTGGAATATGATTACGTTTGGGGGAGTTCTCACCTCACCTGGTTCGACCCC	AREASLEYDYVWGSSHLTWFDP	261	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	23	1	0	95.8
FR2-IMGT	75	125	51	51	0	0	100
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	109	5	0	95.6
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	258	10	0	96.3


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  I  V  S  G  G  S  I  S  S  H  Y  W  S  W  I  R  
                    Query_795    1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCTCCATCAGTAGTCACTACTGGAGCTGGATCCGGC  90
V  96.3% (258/268)  IGHV4-59*01  26   ................T.........................C.........................T.....................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  M  Y  Y  T  G  S  T  K  Y  N  P  S  L  R  S  R  V  T  
                    Query_795    91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATGTATTACACTGGGAGCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCACCA  180
V  96.3% (258/268)  IGHV4-59*01  116  .....................................C.......G............C................A..............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  E  
                    Query_795    181  TATCAGTAGACACGTCCAAGAATCAGTTCTCCCTGAAGTTGAGCTCTGTGAGCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAAG  270
V  96.3% (258/268)  IGHV4-59*01  206  ......................C...............C............C....................................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -------------------CDR3-IMGT--------------------------->                                  
                                      A  S  L  E  Y  D  Y  V  W  G  S  S  H  L  T  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_795    271  CTAGTCTGGAATATGATTACGTTTGGGGGAGTTCTCACCTCACCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  360
D  100.0% (22/22)   IGHD3-16*01  5    -----------......................---------------------------------------------------------  26
J  100.0% (47/47)   IGHJ5*02     5    -------------------------------------------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_20578

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           330     1e-92
IGHD6-13*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGT	GGTATAGCAGCA	CCCTTAAA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGTGGTATAGCAGCACCCTTAAATACTTTGACTAC	ARVWYSSTLKYFDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  I  S  G  T  H  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_796    4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCATCAGTGGTACTCACTATTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  92.4% (230/249)  IGHV4-31*02  50   .....TCC...A...........................G.......GG.T....C..................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  I  T  Y  Y  N  P  S  L  K  S  R  L  T  L  S  V  D  T  S  
                    Query_796    94   TGGAGTGGATTGGGTACATTTATTATAGTGGGATCACCTACTACAATCCGTCCCTCAAGAGTCGACTTACCTTATCAGTAGACACGTCTA  183
V  92.4% (230/249)  IGHV4-31*02  140  ...................C.....C.......G............C..................G.....A..................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  K  L  S  S  L  T  A  A  D  T  A  V  Y  F  C  A  R  V  W  Y  S  S  T  L  
                    Query_796    184  AGAACCAGTTCTCCCTGAAGCTGAGCTCCCTGACTGCCGCGGACACGGCCGTATATTTCTGTGCGAGAGTGTGGTATAGCAGCACCCTTA  273
V  92.4% (230/249)  IGHV4-31*02  230  ............................TG......................G....A...........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD6-13*01  2    ------------------------------------------------------------------------............------  13

                                      ------------->                                
                                      K  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_796    274  AATACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
J  100.0% (44/44)   IGHJ4*02     3    --............................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_214280

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           324     7e-91
IGHD4-17*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CCCCCGA	TGACGACGGTGACTAC	CGCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCCCCCGATGACGACGGTGACTACCGCCCTTTTGACAAC	AKAPDDDGDYRPFDN	232	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	10	1	0	90.9
CDR1-IMGT	19	42	24	23	1	0	95.8
FR2-IMGT	43	93	51	50	1	0	98
CDR2-IMGT	94	117	24	21	3	0	87.5
FR3-IMGT	118	231	114	108	6	0	94.7
CDR3-IMGT (germline)	232	238	7	7	0	0	100
Total	N/A	N/A	231	219	12	0	94.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  S  G  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  
                    Query_797    8    GTGCAGTCTCTGGATTCACCTTTAGCGGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGGTATTA  97
V  94.8% (219/231)  IGHV3-23*01  65   ......C...................A.........................................................C.....  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      R  S  S  G  D  S  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  S  L  Y  L  
                    Query_797    98   GAAGTAGTGGTGATAGCACATATTATACAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACTCGCTGTATCTGC  187
V  94.8% (219/231)  IGHV3-23*01  155  .TG.........G.........C..CG..................................................A............  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  A  P  D  D  D  G  D  Y  R  P  F  D  N  
                    Query_797    188  AAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATACTACTGTGCGAAAGCCCCCGATGACGACGGTGACTACCGCCCTTTTGACAACT  277
V  94.8% (219/231)  IGHV3-23*01  245  ................................G....T.............---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  93.8% (15/16)    IGHD4-17*01  1    ----------------------------------------------------------....T...........----------------  16
J  95.3% (41/43)    IGHJ4*02     6    --------------------------------------------------------------------------------......T...  15

                                                                       
                                      W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_797    278  GGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  310
J  95.3% (41/43)    IGHJ4*02     16   ...............T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_17510

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            355     3e-100
IGHD6-19*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGGGAG	GCAGTGGC	CCCGGGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGGGAGGCAGTGGCCCCGGGGAC	ARAPGGSGPGD	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	111	3	0	97.4
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  P  G  G  S  I  S  T  S  N  L  W  T  W  V  R  Q  P  P  E  K  G  L 
                    Query_798    1    ACCCTGTCCCTCACCTGCGCTGTCCCTGGTGGCTCCATCAGTACTAGTAACTTGTGGACTTGGGTCCGCCAGCCCCCAGAAAAGGGGCTG  90
V  96.0% (237/247)  IGHV4-4*02   49   ........................T................C.G........G.....G....................GG.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  K  S  K 
                    Query_798    91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAATAGACAAGTCCAAG  180
V  96.0% (237/247)  IGHV4-4*02   139  ...........................................................................G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  A  P  G  G  S  G  P  G 
                    Query_798    181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCATCTATTACTGTGCGAGAGCCCCGGGAGGCAGTGGCCCCGGG  270
V  96.0% (237/247)  IGHV4-4*02   229  ................................................G.G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD6-19*01  8    ----------------------------------------------------------------------------........------  15

                                      -->                                  
                                       D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_798    271  GACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (36/36)   IGHJ4*02     13   -....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_17511

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           341     5e-96
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGTCGTC	ATTACGATTTTTGGAGTGGTT	TTGACGCCACGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGTCGTCATTACGATTTTTGGAGTGGTTTTGACGCCACGTACTACTTTGACTTC	ARGRHYDFWSGFDATYYFDF	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	230	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  H  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_799    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTCACTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.0% (230/242)  IGHV4-59*08  49   ..........................................A..T...A........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  D  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_799    91   TGGATTGGGTATATCGACTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAGAGC  180
V  95.0% (230/242)  IGHV4-59*08  139  ...............T.T...............A..................................A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       H  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  H  Y  D  F  W  S  G 
                    Query_799    181  CACTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTTTATTACTGTGCGAGGGGTCGTCATTACGATTTTTGGAGTGGT  270
V  95.0% (230/242)  IGHV4-59*08  229  ..G...........G....G...........................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (21/21)   IGHD3-3*01   3    ----------------------------------------------------------------------....................  22

                                      GT------------------------>                                  
                                       F  D  A  T  Y  Y  F  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_799    271  TTTGACGCCACGTACTACTTTGACTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  331
D  100.0% (21/21)   IGHD3-3*01   23   .------------------------------------------------------------  23
J  95.8% (46/48)    IGHJ4*02     1    -------------............A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_20576

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           237     2e-64
IGHD1-1*01                                                                                            12.2    36   
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTAGAGGGGGCTTCGGGACACAGT	TACAAC	GGACGGCGGGGGATTC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTAGAGGGGGCTTCGGGACACAGTTACAACGGACGGCGGGGGATTCTGGACGTC	ARVEGASGHSYNGRRGILDV	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	80	30	21	9	0	70
FR2-IMGT	81	131	51	41	10	0	80.4
CDR2-IMGT	132	152	21	11	10	0	52.4
FR3-IMGT	153	266	114	85	29	0	74.6
CDR3-IMGT (germline)	267	271	5	5	0	0	100
Total	N/A	N/A	271	211	60	0	77.9


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  A  T  L  S  L  T  C  T  V  S  G  A  S  I  Y  S  Y  N  D  Y  W  P  W  
                    Query_800    1    CAGGACTGGTGAAGCCCTCGGCGACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCTACAGTTATAATGATTATTGGCCCTGGG  90
V  77.9% (211/271)  IGHV4-39*01  26   ................T....A................................G.......AG....AG..G.T.C..C...GG....A  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      V  R  Q  S  P  G  K  G  L  E  W  T  G  T  Y  H  S  R  G  S  S  S  Y  N  P  S  F  G  G  R  
                    Query_800    91   TCCGTCAGTCCCCGGGGAAGGGCCTGGAGTGGACTGGGACCTATCACTCTCGTGGCAGTTCCTCCTACAACCCATCTTTCGGGGGTCGAG  180
V  77.9% (211/271)  IGHV4-39*01  116  ....C...C....A........G..........T.....GTATCT.T.A.A....G..CA...A.........G..CC..AA.A......  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  S  I  S  L  G  P  S  S  N  Q  I  S  L  Q  L  S  S  V  T  A  T  D  T  S  V  Y  F  C  A  
                    Query_800    181  TCTCTATTTCTCTAGGCCCGTCCAGCAATCAAATCTCCCTGCAACTAAGTTCAGTGACCGCCACAGACACTTCTGTTTATTTCTGTGCGA  270
V  77.9% (211/271)  IGHV4-39*01  206  ..A.C..A..CG...A.A......AG..C..GT........A.G..G..C..T.........G.......GG....G....A........  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  V  E  G  A  S  G  H  S  Y  N  G  R  R  G  I  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_800    271  GGGTAGAGGGGGCTTCGGGACACAGTTACAACGGACGGCGGGGGATTCTGGACGTCTGGGGCCAGGGGACCACTGTCACCGTCTCCTCA  359
V  77.9% (211/271)  IGHV4-39*01  296  .----------------------------------------------------------------------------------------  296
                                                                                                                               
D  100.0% (6/6)     IGHD1-1*01   3    --------------------------......---------------------------------------------------------  8
J  95.1% (39/41)    IGHJ6*02     22   ------------------------------------------------................A........G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_17513

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            277     9e-77
IGHD3-3*02                                                                                            10.3    124  
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-3*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GC	ATTAG	GGCGCGGTTGAAGACTCACAGTTCATTT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGCATTAGGGCGCGGTTGAAGACTCACAGTTCATTTTGGTTCGACCCC	AKGIRARLKTHSSFWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	93	21	0	81.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	213	36	0	85.5


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  G  P  G  K  G  L  
                    Query_801   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGACGACTATGCCATGCACTGGGTCCGCCAAGGTCCAGGGAAGGGCCTGG  90
V  85.5% (213/249)  IGHV3-9*01  47   ...........................................T..T....................G....C.................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  I  T  G  N  A  T  T  I  D  Y  S  N  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_801   91   AGTGGGTCTCAGGTATTACTGGCAATGCAACGACTATAGACTACTCGAATTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCC  180
V  85.5% (213/249)  IGHV3-9*01  137  ..................G.T.G...AGTGGT.GC....G...TG..G.C..T................................C...A  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                     Q  S  V  V  Y  L  Q  M  N  S  L  R  L  D  D  T  G  V  Y  Y  C  A  K  G  I  R  A  R  L  K  
                    Query_801   181  AGAGTGTCGTGTATCTGCAAATGAACAGTCTGAGACTTGACGACACGGGCGTCTACTATTGTGCAAAAGGCATTAGGGCGCGGTTGAAGA  270
V  85.5% (213/249)  IGHV3-9*01  227  ...ACTC.C..........................GC...G.......C.T.G..T..C..........---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD3-3*02  3    -----------------------------------------------------------------------.....--------------  7

                                     IMGT--------------------->                                  
                                     T  H  S  S  F  W  F  D  P  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_801   271  CTCACAGTTCATTTTGGTTCGACCCCAGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  330
J  95.7% (44/46)    IGHJ5*02    6    --------------............T.............C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_20570

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           355     3e-100
IGHD3-10*01                                                                                           52.6    2e-11 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATAAGTGGCTCAG	ATTACTATGGTTCGGGGAGTTATTATA	TACGACCCTCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATAAGTGGCTCAGATTACTATGGTTCGGGGAGTTATTATATACGACCCTCATACTACTTTGACTTC	ARISGSDYYGSGSYYIRPSYYFDF	244	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  T  S  N  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_802    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTCACCAGTAATACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.6% (238/249)  IGHV4-39*01  49   ....................................A...G.....G..G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  S  G  T  P  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_802    91   CTGGAGTGGATTGCGAGTATCTATTACAGTGGGACCCCCTACTACAACCCGTCCCTCAAGAGTCGCGTCACCATATCCGTAGACACGTCC  180
V  95.6% (238/249)  IGHV4-39*01  139  .............G............T.......G.A............................A........................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  I  S  G  S  D  Y  Y 
                    Query_802    181  AAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGCGAGAATAAGTGGCTCAGATTACTAT  270
V  95.6% (238/249)  IGHV4-39*01  229  .....................C...............................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (27/27)   IGHD3-10*01  3    ----------------------------------------------------------------------------------........  10

                                      -----CDR3-IMGT------------------------------>                                  
                                       G  S  G  S  Y  Y  I  R  P  S  Y  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_802    271  GGTTCGGGGAGTTATTATATACGACCCTCATACTACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  349
D  100.0% (27/27)   IGHD3-10*01  11   ...................------------------------------------------------------------  29
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------............A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_17515

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD2-15*01                                                                                           10.3    135   
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AT	TATTG	AGTGATCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAATTATTGAGTGATCGTGCTTTTGATATC	ARQLLSDRAFDI	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	24	0	0	100
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	112	2	0	98.2
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	285	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  D  S  G  Y  S  F  T  
                    Query_803    3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGATTCTGGATACAGCTTTACCA  92
V  96.6% (285/295)  IGHV5-51*01  2    ..................................A..............................A...G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  I  I  F  P  A  D  S  D  A  R  Y  
                    Query_803    93   GCTACTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGTTGGGGATCATCTTTCCTGCTGACTCTGATGCCAGATACA  182
V  96.6% (285/295)  IGHV5-51*01  92   .............C....................................A............A.....G..........A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_803    183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  96.6% (285/295)  IGHV5-51*01  182  .................................C.............A..........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  M  Y  Y  C  A  R  Q  L  L  S  D  R  A  F  D  I  W  G  Q  G  T  M  V  P  V  S  S  
                    Query_803    273  CCGCCATGTATTACTGTGCGAGACAATTATTGAGTGATCGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCCCCGTCTCTTCAG  359
V  96.6% (285/295)  IGHV5-51*01  272  .........................--------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                 
D  100.0% (5/5)     IGHD2-15*01  5    ---------------------------.....-------------------------------------------------------  9
J  97.9% (46/47)    IGHJ3*02     4    ----------------------------------------..................................A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_17516

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     3e-90
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	242	26	6	88.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_804    1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.3% (242/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_804    91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.3% (242/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_804    181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.3% (242/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_804    271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.3% (242/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_17517

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           330     1e-92
IGHD3-22*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACC	GATAGGAGTGGT	CCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACCGATAGGAGTGGTCCCGACTTC	ARTDRSGPDF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	229	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  Y  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_805    1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAGTTACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.7% (229/247)  IGHV3-30*03  47   ....................G.......................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  S  Y  D  G  S  I  I  Y  Y  A  D  S  L  K  G  R  F  I  I  S  R  D  N  S  
                    Query_805    91   AGTGGGTGGCAATTATATCATATGATGGAAGTATAATATACTATGCAGACTCCCTGAAGGGCCGATTCATCATCTCCAGAGACAATTCGA  180
V  92.7% (229/247)  IGHV3-30*03  137  ...........G.....................AT.A................G...............C..................C.  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  D  T  L  Y  L  Q  M  N  S  L  S  P  D  D  T  A  L  Y  Y  C  A  R  T  D  R  S  G  P  D  
                    Query_805    181  AGGACACACTGTATCTACAAATGAACAGCCTGAGCCCTGACGACACGGCTCTCTATTACTGTGCGAGGACCGATAGGAGTGGTCCCGACT  270
V  92.7% (229/247)  IGHV3-30*03  227  ..A....G........G.................AG....G.........G.G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  91.7% (11/12)    IGHD3-22*01  11   -----------------------------------------------------------------------.....T......-------  22
J  97.5% (39/40)    IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                  
                                      F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_805    271  TCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.5% (39/40)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_85799

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	RELLWC*LQTTLTT	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	128	21	20	0	1	95.2
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	250	246	3	1	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_806    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I   F  T  V  G  A  P  T  T  T  R  P  S  R  V  D  L  P  Y  Q  *  T  R  L
                    Query_806    91   CTGGAGTGGATTGGGAACATCT-TTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  179
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                        R  T  S  S  P  *  S  *  A  L  *  L  P  R  T  R  P  C  I  T  V  R  E  L  L  W  C  *  L  Q
                    Query_806    180  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  269
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                        T  T  L  T  T  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_806    270  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_146376

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_807    1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_807    91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_807    181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_807    271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_324897

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           283     1e-78
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCAGC	ATACATCTCTGGT	CACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAGCATACATCTCTGGTCACCCCTAC	SAYISGHPY	240	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	101	13	0	88.6
Total	N/A	N/A	239	210	29	0	87.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  V  S  V  H  Y  M  S  W  V  R  Q  A  P  G  R  G  L  
                    Query_808    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCGTCAGTGTACACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAGGGGACTGG  90
V  87.9% (210/239)  IGHV3-53*01  47   ...............................G...A........AGCA.................................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  L  T  S  G  K  T  Y  Y  T  D  S  A  M  G  R  F  T  I  S  R  D  S  S  K  
                    Query_808    91   AGTGGGTCTCAGCGATTCTTACCAGTGGTAAGACATACTACACAGACTCCGCGATGGGCCGATTCACCATCTCCAGAGACTCTTCCAAGA  180
V  87.9% (210/239)  IGHV3-53*01  137  ............TT...TA..G.G......GC.........G.........T..A.........................AA........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->    
                                      N  T  V  N  H  Q  M  N  S  L  S  A  G  D  T  A  F  Y  Y  C  S  A  Y  I  S  G  H  P  Y  W  
                    Query_808    181  ACACAGTGAATCATCAAATGAACAGCCTGAGCGCCGGGGACACGGCCTTCTATTACTGTTCAGCATACATCTCTGGTCACCCCTACTGGG  270
V  87.9% (210/239)  IGHV3-53*01  227  ....GC..T...T..................A....A..........G.G.........-------------------------------  285
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                                
D  84.6% (11/13)    IGHD5-18*01  5    ----------------------------------------------------------------.....G..A....-------------  17
J  100.0% (38/38)   IGHJ4*02     11   ----------------------------------------------------------------------------------........  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_808    271  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  300
J  100.0% (38/38)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_324896

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           343     2e-96
IGHD5-12*01                                                                                           25.7    0.003
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAA	AGTGGCTACGATT	TGCGTTTGGTGA	TCGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAAAGTGGCTACGATTTGCGTTTGGTGATCGGCCCC	AREKSGYDLRLVIGP	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  S  N  Y  Y  W  G  W  I  R  Q  P  Q  G  K  G 
                    Query_809    1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGCAGTAATTACTACTGGGGCTGGATCCGCCAGCCCCAAGGGAAGGGG  90
V  93.6% (235/251)  IGHV4-39*02  49   ...................C........................T....G.............................C..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  G  F  Y  S  T  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_809    91   CTGGAGTGGATTGGGGGTTTTTACTCTACTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCATAGACACGTCC  180
V  93.6% (235/251)  IGHV4-39*02  139  ...............A..A.C..T.A..G.................................................G...........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  E  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  K  S  G  Y  D  L 
                    Query_809    181  AGGAACGAGTTCTCCCTGAAGCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGCGAGAGAGAAAAGTGGCTACGATTTG  270
V  93.6% (235/251)  IGHV4-39*02  229  .A....C.C................G...........................G.................-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD5-12*01  9    ---------------------------------------------------------------------------.............--  21

                                      ----------------->                                  
                                       R  L  V  I  G  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_809    271  CGTTTGGTGATCGGCCCCTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  322
J  95.2% (40/42)    IGHJ5*02     10   ----------...A...........A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_324895

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         349     2e-98
IGHD5-12*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGAGGAT	TGGCTACGA	GACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGACCCCCTTTGACCTC	ARAGRIGYETPFDL	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_810      1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTACTCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  95.1% (235/247)  IGHV4-38-2*02  49   ................................................T.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K 
                    Query_810      91   GAGTGGATTGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAG  180
V  95.1% (235/247)  IGHV4-38-2*02  139  ......................A.........C.........A..............A........................C.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  Q  F  S  L  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  T 
                    Query_810      181  AACCAGTTCTCGTTGAATCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGAGCGGGGAGGATTGGCTACGAGACC  270
V  95.1% (235/247)  IGHV4-38-2*02  229  ...........CC....G....G...........C...............G................-----------------------  295
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD5-12*01    11   -----------------------------------------------------------------------------.........----  19

                                        ----------->                                  
                                         P  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_810      271  CCCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.5% (42/44)    IGHJ4*02       5    --.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_324894

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           322     2e-90
IGHD1-26*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGC	ATAGTGGGAGCTACT	TGT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGCATAGTGGGAGCTACTTGTACTTCTTTGACTAC	ARLHSGSYLYFFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  T  S  G  F  T  V  I  N  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_811    1    GGTCCCTGAGACTCTCCTGTTCGACCTCTGGATTCACCGTCATTAATAATTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.2% (225/244)  IGHV3-53*01  47   ....................G.AG.......G..........G..GC..C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  Y  T  N  G  R  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_811    91   AGTGGGTCTCAGCCATTTATACCAATGGTCGCACATTCTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGA  180
V  92.2% (225/244)  IGHV3-53*01  137  ............TT.......G.GG....A......A........................A............................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  E  M  N  S  L  R  A  A  D  T  A  V  Y  Y  C  A  R  L  H  S  G  S  Y  L  Y  
                    Query_811    181  ACACGCTGTATCTTGAAATGAACAGCCTGAGAGCCGCGGACACGGCCGTGTATTATTGTGCGAGGCTGCATAGTGGGAGCTACTTGTACT  270
V  92.2% (225/244)  IGHV3-53*01  227  ..............C.....................A..................C........--------------------------  290
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  100.0% (15/15)   IGHD1-26*01  4    ---------------------------------------------------------------------...............------  18
J  93.8% (45/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      F  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_811    271  TCTTTGACTACTGGGGCCAGGGGGCCCTGGTCACCGTCTCCTCAG  315
J  93.8% (45/48)    IGHJ4*02     4    A.....................AA.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_324893

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGGG	AGCAATGGCTGG	GGAAGGTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTATGGACGCC	ARGHRGSNGWGRYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	228	17	6	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_812    1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCAGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  90.8% (228/251)  IGHV4-34*01  49   .......................C..T................------....C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  H  R  G  G  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_812    91   CTGGAATGGATTGGGGAAATCATTCATCGTGGAGGCACCAACTACAACCCGTCCCTCCAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  90.8% (228/251)  IGHV4-34*01  133  .....G................A....A.....A.......................A................................  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  G  S  N  G 
                    Query_812    181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGGGAGCAATGGC  270
V  90.8% (228/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  R  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_812    271  TGGGGAAGGTACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  93.8% (45/48)    IGHJ6*02     15   ------------------.............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_324892

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD6-19*01                                                                                           31.5    5e-05
IGHJ5*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATCCTC	TAGCAGTGGCTGGTAC	CT	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGATCCTCTAGCAGTGGCTGGTACCTCAACTGGTTCGACCCC	ARGSSSSGWYLNWFDP	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	113	1	0	99.1
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E  
                    Query_813    4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGAGACTGGAGT  93
V  94.7% (230/243)  IGHV4-59*01  50   .....TCC...A....C.............G..........................................A......G.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  F  I  Y  Y  T  G  S  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_813    94   GGATTGGGTTTATCTATTACACTGGGAGCGCCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAACC  183
V  94.7% (230/243)  IGHV4-59*01  140  .........A...........G.......A...........................................A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  S  S  S  G  W  Y  L  
                    Query_813    184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGGATCCTCTAGCAGTGGCTGGTACCTCA  273
V  94.7% (230/243)  IGHV4-59*01  230  ...........................................................A...---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (16/16)   IGHD6-19*01  6    ----------------------------------------------------------------------................----  21
J  100.0% (50/50)   IGHJ5*02     2    ----------------------------------------------------------------------------------------..  3

                                      ------------->                                  
                                      N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_813    274  ACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (50/50)   IGHJ5*02     4    ................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_324891

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           343     2e-96
IGHD2-2*01                                                                                            12.2    32   
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTCC	TACCAACTACTA	ACGAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCTACCAACTACTAACGACCTACTCCTACGCTATGGACGTC	ARGSYQLLTTYSYAMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  R  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_814    1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTCAGGAACTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-48*03  47   .....................C.....................T.GT...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  Y  I  S  T  S  G  S  T  N  Y  N  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_814    91   ATTGGGTTTCATATATTAGTACTAGTGGTAGTACCAACTACAACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (234/249)  IGHV3-48*03  137  .G...........C.......G..............TA...T................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  T  P  E  D  T  A  V  Y  Y  C  A  R  G  S  Y  Q  L  L  T  
                    Query_814    181  AGAATTCACTGTATTTGCAAATGAACAGCCTGACACCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGGTCCTACCAACTACTAACGA  270
V  94.0% (234/249)  IGHV3-48*03  227  ....C.........C..................G.G.................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  83.3% (10/12)    IGHD2-2*01   16   --------------------------------------------------------------------------.....G..G...----  27

                                      GT-------------------->                                 
                                      T  Y  S  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_814    271  CCTACTCCTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  96.4% (53/55)    IGHJ6*02     8    -.....A.....G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_324890

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           431     4e-123
IGHD2-2*01                                                                                            19.9    0.18  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACCG	TGTAGTAGTA	GTGCCTGTTATTCGCGT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACCGTGTAGTAGTAGTGCCTGTTATTCGCGTTACGGCATGGACGTC	ARVPCSSSACYSRYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	283	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_815    1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  97.6% (283/290)  IGHV1-69*01  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  F  I  P  P  F  G  T  A  N  H  A  Q
                    Query_815    91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGTTCATCCCTCCCTTTGGTACAGCAAATCACGCACA  180
V  97.6% (283/290)  IGHV1-69*01  96   .......................................................A........AT...............CT.......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_815    181  GAAGTTCCAGGGAAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  97.6% (283/290)  IGHV1-69*01  186  ............C.............................................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  V  P  C  S  S  S  A  C  Y  S  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T
                    Query_815    271  CGTGTATTACTGTGCGAGAGTACCGTGTAGTAGTAGTGCCTGTTATTCGCGTTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCAC  360
V  97.6% (283/290)  IGHV1-69*01  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD2-2*01   8    -------------------------..........-------------------------------------------------------  17
J  97.9% (47/48)    IGHJ6*02     15   ----------------------------------------------------.....T................................  52

                                                
                                        V  S  S 
                    Query_815    361  CGTCTCCTCA  370
J  97.9% (47/48)    IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_324899

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           343     2e-96
IGHD2-15*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CCTCTGGTT	TTGTAGTGGTGCTAACTGCTACTC	GGACG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCCTCTGGTTTTGTAGTGGTGCTAACTGCTACTCGGACGACTTTGACTAC	ALWFCSGANCYSDDFDY	252	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	38	38	29	0	9	76.3
CDR1-IMGT	39	62	24	23	1	0	95.8
FR2-IMGT	63	113	51	50	1	0	98
CDR2-IMGT	114	137	24	20	4	0	83.3
FR3-IMGT	138	251	114	114	0	0	100
CDR3-IMGT (germline)	252	253	2	2	0	0	100
Total	N/A	N/A	253	238	6	9	94.1


Alignments

                                      <--------------FR1-IMGT--------------><-------CDR1-IMGT------><--------------------FR2-IMG
                                         S  L  R  L  S  C  A  A  P  G  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  
                    Query_816    1    GGTCCCTGAGACTCTCCTGTGCAGCCCCTGGAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGA  90
V  94.1% (238/253)  IGHV3-21*01  47   ..........................---------....................C..................................  127
                                         S  L  R  L  S  C  A  A           S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  

                                      T---------------------><-------CDR2-IMGT------><------------------------------------------
                                      K  G  L  E  W  V  S  Y  S  S  S  S  S  R  S  V  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  
                    Query_816    91   AGGGGCTGGAGTGGGTCTCATACAGTAGTAGTAGTAGTCGTTCCGTATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAG  180
V  94.1% (238/253)  IGHV3-21*01  128  .....................C..T.............A...A.A.............................................  217
                                      K  G  L  E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  

                                      ----------FR3-IMGT----------------------------------------------------><------------------
                                      D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  L  W  F  C  S  
                    Query_816    181  ACAACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCCCTCTGGTTTTGTAGTG  270
V  94.1% (238/253)  IGHV3-21*01  218  .........................................................................-----------------  290
                                      D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                 
D  91.7% (22/24)    IGHD2-15*01  7    ----------------------------------------------------------------------------------........  14

                                      --CDR3-IMGT-------------------->                                  
                                      G  A  N  C  Y  S  D  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_816    271  GTGCTAACTGCTACTCGGACGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  91.7% (22/24)    IGHD2-15*01  15   ...G..G.........--------------------------------------------------  30
J  100.0% (45/45)   IGHJ4*02     4    ---------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_14406

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           329     3e-92
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ4*01                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCGGAGGTGGGATGACGCGGACTACTCCTCC	GATACTAGTGGTT	TTCGACCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCGGAGGTGGGATGACGCGGACTACTCCTCCGATACTAGTGGTTTTCGACCT	ARGRRWDDADYSSDTSGFRP	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  N  S  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_817    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCCGGAACAGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  92.3% (229/248)  IGHV4-31*03  49   .......................................A.C.GTG............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  H  S  G  S  A  Y  Y  N  P  S  L  K  S  *  T  S  I  S  V  D  T  S 
                    Query_817    91   CTGGAATGGATTGGCTACATCTATCACAGTGGGAGCGCCTACTACAACCCGTCCCTCAAGAGTTGAACTTCCATATCAGTAGACACGTCT  180
V  92.3% (229/248)  IGHV4-31*03  139  .....G........G.........T...........A..........................C..GT.A....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  W  D  D  A 
                    Query_817    181  AAGAACCAGTTCTCTCTGATTCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGGGGCCGGAGGTGGGATGACGCG  270
V  92.3% (229/248)  IGHV4-31*03  229  ..............C....AG....GC.............................T...........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      DR3-IMGT------------------------>                                  
                                       D  Y  S  S  D  T  S  G  F  R  P  W  G  H  G  T  L  V  T  V  S  S  
                    Query_817    271  GACTACTCCTCCGATACTAGTGGTTTTCGACCTTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  337
D  92.3% (12/13)    IGHD3-22*01  11   ------------....G........------------------------------------------  23
J  97.1% (33/34)    IGHJ4*01     15   ---------------------------------........A.........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_342551

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           388     5e-110
IGHD3-10*01                                                                                           46.8    1e-09 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGCTTCAGAC	TACTATGGTTCGGGGAGTTATTAT	N/A	TACAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGCTTCAGACTACTATGGTTCGGGGAGTTATTATTACATTGACTAC	ARVASDYYGSGSYYYIDY	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	249	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  R  I  R  Q  P  P  G  K  G 
                    Query_818    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTAGTTACTACTGGAGCCGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  99.6% (249/250)  IGHV4-61*01  49   ...............................................................T..........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_818    91   CTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  99.6% (249/250)  IGHV4-61*01  139  ..........................................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  A  S  D  Y  Y  G 
                    Query_818    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTTGCTTCAGACTACTATGGT  270
V  99.6% (249/250)  IGHV4-61*01  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (24/24)   IGHD3-10*01  5    ---------------------------------------------------------------------------------.........  13

                                      -IMGT--------------------->                                  
                                       S  G  S  Y  Y  Y  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_818    271  TCGGGGAGTTATTATTACATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  100.0% (24/24)   IGHD3-10*01  14   ...............----------------------------------------------  28
J  97.8% (45/46)    IGHJ4*02     3    ---------------...T..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_157413

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD3-3*01                                                                                            12.2    35   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CTGTCTTTTCCACATGAATCCGGGGGTCCCCCCGACAGACGG	CGATTT	CGGACCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTGTCTTTTCCACATGAATCCGGGGGTCCCCCCGACAGACGGCGATTTCGGACCCACTACTTTGACTCT	AKLSFPHESGGPPDRRRFRTHYFDS	243	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  A  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_819    1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAGTAGTTACGCCCTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.7% (225/248)  IGHV3-23*01  47   .....................C.....................C..C..T...A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  H  I  S  S  S  G  D  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_819    91   ATTGGGTCTCACATATTAGTTCTAGTGGTGATACTACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCTA  180
V  90.7% (225/248)  IGHV3-23*01  137  .G.........GC.......GG........G..GC.....................................................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  T  T  V  Y  L  Q  L  K  S  L  R  D  E  D  T  A  V  Y  Y  C  A  K  L  S  F  P  H  E  S  
                    Query_819    181  AGACCACGGTGTATCTGCAATTGAAAAGCCTGAGAGACGAGGACACAGCCGTTTACTACTGTGCGAAACTGTCTTTTCCACATGAATCCG  270
V  90.7% (225/248)  IGHV3-23*01  227  ...A....C...........A....C..........C.........G.....A..T............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -----CDR3-IMGT-------------------------------->                                  
                                      G  G  P  P  D  R  R  R  F  R  T  H  Y  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_819    271  GGGGTCCCCCCGACAGACGGCGATTTCGGACCCACTACTTTGACTCTTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  351
D  100.0% (6/6)     IGHD3-3*01   7    --------------------......-------------------------------------------------------  12
J  93.8% (45/48)    IGHJ4*02     1    ---------------------------------............AC............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_157412

Length=318
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            324     7e-91
IGHD3-9*01                                                                                            25.7    0.003
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAA	ATTACGATATTTT	N/A	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	18	6	0	75
FR3-IMGT	125	238	114	111	3	0	97.4
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	231	219	12	0	94.8


Alignments

                                     <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                        A  A  S  G  F  T  F  S  R  S  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  
                    Query_820   15   GTGCAGCCTCTGGATTCACGTTTAGTAGGTCTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAA  104
V  94.8% (219/231)  IGHV3-7*01  65   ...................C........C.A...........................................................  154
                                        A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                     ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                     N  E  D  E  S  R  R  S  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_820   105  ACGAAGATGAAAGTAGGAGATCCTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGC  194
V  94.8% (219/231)  IGHV3-7*01  155  .GC......G....GA..A..A....................................................................  244
                                     K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                     ------------------------------------------->                                              
                                     Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  A  N  Y  D  I  L  G  Q  G  T  L  V  T  
                    Query_820   195  AAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTACTACTGTGCGAGAGCAAATTACGATATTTTGGGCCAGGGAACCCTGGTCACCG  284
V  94.8% (219/231)  IGHV3-7*01  245  ..................C..................T.............---------------------------------------  295
                                     Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (13/13)   IGHD3-9*01  3    ------------------------------------------------------.............-----------------------  15
J  100.0% (32/32)   IGHJ4*02    17   -------------------------------------------------------------------.......................  39

                                              
                                     V  S  S  
                    Query_820   285  TCTCCTCAG  293
J  100.0% (32/32)   IGHJ4*02    40   .........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30726981


Query= Query_157411

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           285     4e-79
IGHD5-18*01                                                                                           14.1    8.8  
IGHJ3*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GAATTTGGCGGG	ACAGCTTTGG	CCAGGC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGAATTTGGCGGGACAGCTTTGGCCAGGCTGATGCTTTTGATGTC	AKGIWRDSFGQADAFDV	252	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	137	33	21	3	9	63.6
FR3-IMGT	138	251	114	96	18	0	84.2
CDR3-IMGT (germline)	252	258	7	7	0	0	100
Total	N/A	N/A	258	222	27	9	86


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_821    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAGTAACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  86.0% (222/258)  IGHV3-23*01  47   ....................................C......C.G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----------CDR2-IMGT-----------><------------------------------------------
                                      E  W  V  S  L  I  S  G  S  G  A  R  G  R  S  T  Y  Y  A  S  S  V  K  G  R  F  T  I  S  R  
                    Query_821    91   AGTGGGTCTCACTTATTAGCGGAAGTGGTGCTAGAGGTCGTAGTACATATTATGCAAGCTCCGTGAAGGGCCGGTTCACCATCTCCAGAG  180
V  86.0% (222/258)  IGHV3-23*01  137  ...........GC......T..T.......---------....C.....C..C...GA................................  217
                                      E  W  V  S  A  I  S  G  S  G           G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  

                                      ----------FR3-IMGT----------------------------------------------------><------------------
                                      D  N  S  K  K  M  M  F  L  D  M  G  S  L  R  V  E  D  T  A  I  Y  Y  C  A  K  G  I  W  R  
                    Query_821    181  ACAACTCCAAGAAAATGATGTTTTTGGATATGGGGAGCCTGAGAGTCGAGGACACGGCCATATATTATTGTGCGAAAGGAATTTGGCGGG  270
V  86.0% (222/258)  IGHV3-23*01  218  ....T........C.C.C...A.C..C.A...AAC..........C.............G.......C..........------------  295
                                      D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K              

                                      --CDR3-IMGT-------------------->                                  
                                      D  S  F  G  Q  A  D  A  F  D  V  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_821    271  ACAGCTTTGGCCAGGCTGATGCTTTTGATGTCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  336
D  90.0% (9/10)     IGHD5-18*01  7    ......A...--------------------------------------------------------  16
J  98.0% (49/50)    IGHJ3*01     1    ----------------...............................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_157410

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           371     7e-105
IGHD2-15*01                                                                                           21.8    0.043 
IGHJ5*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGGGTATTCTGTTGC	GGTGGTAGGTGCTA	GTG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGGGTATTCTGTTGCGGTGGTAGGTGCTAGTGACAACTGGTTCGACTCC	ARHGGYSVAVVGASDNWFDS	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  I  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_822    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATAGTATTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  97.2% (244/251)  IGHV4-39*01  49   .........................................C.G.....G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_822    91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  97.2% (244/251)  IGHV4-39*01  139  ..........................................................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  V  S  L  K  L  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  H  G  G  Y  S  V  A 
                    Query_822    181  AAGAATCAGGTCTCCCTGAAGCTGAGCTCTATGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATGGCGGGTATTCTGTTGCG  270
V  97.2% (244/251)  IGHV4-39*01  229  .....C...T....................G........................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD2-15*01  14   -----------------------------------------------------------------------------------------.  14

                                      DR3-IMGT------------------------>                                  
                                       V  V  G  A  S  D  N  W  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_822    271  GTGGTAGGTGCTAGTGACAACTGGTTCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  337
D  92.9% (13/14)    IGHD2-15*01  15   .......C.....------------------------------------------------------  27
J  98.0% (50/51)    IGHJ5*01     1    ----------------.........................A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_185918

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            397     7e-113
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	AATGGCG	ATAGCACTGGCTGGT	GT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAAATGGCGATAGCACTGGCTGGTGTTACTTTGACTAC	ARNGDSTGWCYFDY	273	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	158	27	24	3	0	88.9
FR3-IMGT	159	272	114	109	5	0	95.6
CDR3-IMGT (germline)	273	278	6	6	0	0	100
Total	N/A	N/A	278	266	12	0	95.7


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  T  I  S  G  D  S  I  S  S  N  N  A  A  W  N  W  
                    Query_823    1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTACCATCTCCGGGGACAGTATCTCTAGCAACAATGCTGCTTGGAACTGGA  90
V  95.7% (266/278)  IGHV6-1*01   26   .........................................G.................G............G.................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  A  Y  Y  R  S  K  W  Y  D  D  Y  S  V  S  V  K  
                    Query_823    91   TCAGGCAGTCCCCATCGCGAGGCCTTGAGTGGCTGGGAAGGGCATATTACAGGTCCAAGTGGTATGATGATTATTCAGTCTCTGTGAAGA  180
V  95.7% (266/278)  IGHV6-1*01   116  .................A.......................A....C..................A........G....A........A.  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_823    181  GTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCTCTGCAACTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  95.7% (266/278)  IGHV6-1*01   206  ...........................................C.....G........................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------------CDR3-IMGT--------------->                                  
                                      C  A  R  N  G  D  S  T  G  W  C  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_823    271  GTGCAAGAAATGGCGATAGCACTGGCTGGTGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  348
V  95.7% (266/278)  IGHV6-1*01   296  ........----------------------------------------------------------------------  303
                                      C  A  R                                                                       
D  93.3% (14/15)    IGHD6-19*01  5    ---------------......G........------------------------------------------------  19
J  100.0% (46/46)   IGHJ4*02     3    --------------------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_157415

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           366     2e-103
IGHD1-1*01                                                                                            12.2    32    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTAC	AEEKRRVPRGTFHY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_824    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-23*01  47   ................................T.........G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  
                    Query_824    91   AGTGGGTCTCAGCCATTAGTGGTGGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGA  180
V  96.8% (242/250)  IGHV3-23*01  137  .............T.........A......................................................G.........C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  
                    Query_824    181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGG  270
V  96.8% (242/250)  IGHV3-23*01  227  .................................................................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------------------------......------------  17

                                      ------------->                                  
                                      G  T  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_824    271  GAACCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (43/44)    IGHJ4*02     5    ----....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_157414

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           344     6e-97
IGHD3-10*01                                                                                           12.2    32   
IGHJ6*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGAAA	GGGAGT	GAGA	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAAAGGGAGTGAGATACGACTACTACGATATGGACGTC	ARDRKGVRYDYYDMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  S  Y  D  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_825    1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACTTTCAGCAGTTATGACATCAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-48*03  47   ........................C............C.....T........A..G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  S  S  S  G  I  I  V  R  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_825    91   AGTGGGTTTCATTCATTAGTAGTAGTGGTATTATTGTAAGATACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACGACGCCA  180
V  94.0% (235/250)  IGHV3-48*03  137  ............A.................G..CCA..TAC..........................................A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  K  G  V  R  Y  
                    Query_825    181  AGAACTCTCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATCGAAAGGGAGTGAGATACG  270
V  94.0% (235/250)  IGHV3-48*03  227  .......A..............................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01  17   ----------------------------------------------------------------------------......--------  22
J  96.5% (55/57)    IGHJ6*02     6    --------------------------------------------------------------------------------------...T  9

                                      T------------------>                                 
                                      D  Y  Y  D  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_825    271  ACTACTACGATATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.5% (55/57)    IGHJ6*02     10   .........G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_185915

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           333     1e-93
IGHD1-1*01                                                                                            14.1    8.4  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGGCCTT	TGGAACG	GGGGACTACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGGCCTTTGGAACGGGGGACTACCACTTTGACTAC	ARAPAFGTGDYHFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  I  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_826    1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCATCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-11*01  47   .....................C..............C.....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  G  S  G  S  R  I  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  G  N  A  
                    Query_826    91   AGTGGCTTTCATACATTAGTGGTAGTGGTTCTAGGATCCACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGGCAACGCCG  180
V  92.8% (231/249)  IGHV3-11*01  137  .....G..............A........AG..CC..AT..........................................A.......A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  F  C  A  R  A  P  A  F  G  T  G  
                    Query_826    181  AGAACTCCCTATATCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCCATTTATTTCTGTGCGAGAGCCCCGGCCTTTGGAACGGGGG  270
V  92.8% (231/249)  IGHV3-11*01  227  .......A..G..............C........................G.G....A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-1*01   9    -------------------------------------------------------------------------------.......----  15

                                      ---------------->                                  
                                      D  Y  H  F  D  Y  W  G  Q  G  A  P  V  T  V  S  S  
                    Query_826    271  ACTACCACTTTGACTACTGGGGCCAGGGAGCCCCGGTCACCGTCTCCTCAG  321
J  95.6% (43/45)    IGHJ4*02     4    ------.......................A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_157419

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           419     2e-119
IGHD7-27*01                                                                                           14.1    9.9   
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTCTCTACAGAACCGTCCTATGGGACA	CTAACTG	TGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCC	ARDPFSTEPSYGTLTVRFDP	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_827    2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAT  91
V  96.2% (279/290)  IGHV1-18*01  7    .....................................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       P  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  D  T  N  Y  A  Q 
                    Query_827    92   CCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTGACACAAATTATGCACAG  181
V  96.2% (279/290)  IGHV1-18*01  97   GG..........................................................G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  D  L  R  S  L  T  S  D  D  T  A 
                    Query_827    182  AAGTTCCAGGGCAGAGTCACCTTGACCACAGACACGTCCACGAGCACAGCCTACATGGACCTGAGGAGCCTGACATCTGACGACACGGCC  271
V  96.2% (279/290)  IGHV1-18*01  187  ...C.................A.............A.......................G.............G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------CDR3-IMGT------------------------>                  
                                       V  Y  Y  C  A  R  D  P  F  S  T  E  P  S  Y  G  T  L  T  V  R  F  D  P  W  G  Q  G  T  L 
                    Query_827    272  GTGTATTACTGTGCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCCTGGGGCCAGGGAACCCTG  361
V  96.2% (279/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (7/7)     IGHD7-27*01  1    ---------------------------------------------------.......--------------------------------  7
J  97.8% (44/45)    IGHJ5*02     7    -------------------------------------------------------------.............................  35

                                                      
                                       V  T  V  S  T  
                    Query_827    362  GTCACCGTCTCCACAG  377
J  97.8% (44/45)    IGHJ5*02     36   ............T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_157418

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	AATCAC	GTATCACTATGATAATAATGGTTAT	AAG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATCACGTATCACTATGATAATAATGGTTATAAGTACTTTGACTAC	ARGITYHYDNNGYKYFDY	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	113	1	0	99.1
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	230	14	0	94.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E  
                    Query_828    4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAAT  93
V  94.3% (230/244)  IGHV4-34*01  50   .....TCC...A...........................................C...A............................G.  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  E  I  N  H  G  G  D  S  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_828    94   GGCTTGGGGAAATCAATCATGGTGGAGACTCTAAGTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  94.3% (230/244)  IGHV4-34*01  140  ..A.................A.....AG.A.C..C.......................................................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  I  T  Y  H  Y  D  N  N  
                    Query_828    184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGAATCACGTATCACTATGATAATAATG  273
V  94.3% (230/244)  IGHV4-34*01  230  ................................................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  88.0% (22/25)    IGHD3-22*01  1    ----------------------------------------------------------------------....T.........G..G..  20

                                      ------------------->                                  
                                      G  Y  K  Y  F  D  Y  W  S  Q  G  T  L  V  T  V  S  S  
                    Query_828    274  GTTATAAGTACTTTGACTACTGGAGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  88.0% (22/25)    IGHD3-22*01  21   .....-------------------------------------------------  25
J  97.8% (45/46)    IGHJ4*02     3    --------...............G..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_185910

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            276     3e-76
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	96	18	0	84.2
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	211	35	0	85.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_829    1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  85.8% (211/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  S  M  S  V  D  K  S  K 
                    Query_829    91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCAGCATGTCAGTAGACAAGTCCAAG  180
V  85.8% (211/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A............C...A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  N  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_829    181  AATCAATTCTCCCTCACGCTGACGTCTCTGAACGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  85.8% (211/246)  IGHV4-4*01   229  ..C..G........G.A.....GC...G...C..................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_829    271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_185913

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           363     1e-102
IGHD3-10*01                                                                                           23.8    0.011 
IGHJ5*01                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCCCCCATTG	GGTTCGGGGAGT	ATTGGAG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCCCCCATTGGGTTCGGGGAGTATTGGAGCTGGTTCGACTCC	AKPPIGFGEYWSWFDS	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_830    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (240/248)  IGHV3-30*18  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  V  S  F  D  G  S  N  K  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_830    91   AGTGGGTGGCAGTTGTATCATTTGATGGAAGTAATAAATACTATACAGACTCGGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  96.8% (240/248)  IGHV3-30*18  137  ..............A......A......................G.......C................................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  P  P  I  G  F  G  E  
                    Query_830    181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTTGAGGACACGGCTGTATATTACTGTGCGAAACCCCCCATTGGGTTCGGGGAGT  270
V  96.8% (240/248)  IGHV3-30*18  227  ....................................C...............G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD3-10*01  11   ------------------------------------------------------------------------------............  22

                                      T------------------>                                  
                                      Y  W  S  W  F  D  S  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_830    271  ATTGGAGCTGGTTCGACTCCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  324
J  95.7% (45/47)    IGHJ5*01     5    -------.....................A.......T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_231539

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           333     1e-93
IGHD5-18*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACAAGGGGATAA	CTATAGTTAC	GAATCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACAAGGGGATAACTATAGTTACGAATCT	AQGDNYSYES	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	241	2	2	0	0	100
Total	N/A	N/A	241	227	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  W  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_831    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTTGGAACTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.2% (227/241)  IGHV3-53*01  47   ............................................A.C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  A  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  K  
                    Query_831    91   AGTGGGTCTCAGTCATTTATGCCGGTGGTAGCACATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  94.2% (227/241)  IGHV3-53*01  137  .............T......AG...............C..C........................................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------CDR3-IMGT---------> 
                                      K  V  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  Q  G  D  N  Y  S  Y  E  S  
                    Query_831    181  AAGTGTTGTATCTTCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCACAAGGGGATAACTATAGTTACGAATCTT  270
V  94.2% (227/241)  IGHV3-53*01  227  .CAC.C.............G.........................................-----------------------------  287
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  90.0% (9/10)     IGHD5-18*01  11   -------------------------------------------------------------------------....G.....-------  20
J  97.1% (33/34)    IGHJ4*02     15   -----------------------------------------------------------------------------------------.  15

                                                                       
                                      W  G  R  G  T  L  V  T  V  S  S  
                    Query_831    271  GGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  303
J  97.1% (33/34)    IGHJ4*02     16   ......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_231538

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           372     2e-105
IGHD6-13*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCTCGCCACAGAA	AGCAGCAGCT	ATAACTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCTCGCCACAGAAAGCAGCAGCTATAACTTTCTACTTTGACTAC	ARVSPQKAAAITFYFDY	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	241	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  H  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_832    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACCACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.8% (241/244)  IGHV4-59*01  49   ................................................T.........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  T  S  K  N 
                    Query_832    91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (241/244)  IGHV4-59*01  139  ...............................................................A..........................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  P  Q  K  A  A  A  I 
                    Query_832    181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTCTCGCCACAGAAAGCAGCAGCTATA  270
V  98.8% (241/244)  IGHV4-59*01  229  ....................C...........................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  7    -----------------------------------------------------------------------------..........---  16

                                      ----------------->                                  
                                       T  F  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_832    271  ACTTTCTACTTTGACTACTGGGGCCAGGGTACCCTGGTCACCGTCTCCTCAG  322
J  97.9% (46/47)    IGHJ4*02     2    -----........................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_214978

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCTCGCCACAGAA	AGCAGCAGCT	ATAACTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCTCGCCACAGAAAGCAGCAGCTATAACTTACTACTTTGACTAC	ARVSPQKAAAITYYFDY	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	113	1	0	99.1
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	236	7	0	97.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  H  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_833    4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAGTTACCACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  97.1% (236/243)  IGHV4-59*01  50   .....TCC...A....C..............................T..........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_833    94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  97.1% (236/243)  IGHV4-59*01  140  ..........................................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  P  Q  K  A  A  A  I  
                    Query_833    184  AGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTCTCGCCACAGAAAGCAGCAGCTATAA  273
V  97.1% (236/243)  IGHV4-59*01  230  ...................C...........................................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD6-13*01  7    ----------------------------------------------------------------------------..........----  16

                                      ---------------->                                  
                                      T  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_833    274  CTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (48/48)   IGHJ4*02     1    ---................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_231535

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     9e-99
IGHD6-13*01                                                                                           27.6    8e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GAAAGGGTCCGTT	TAGCAGCAGCTGGT	GGAAACTACGTGGGGGGGGGAGAG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAAGGGTCCGTTTAGCAGCAGCTGGTGGAAACTACGTGGGGGGGGGAGAGACGGTATGGACGTC	ARKGPFSSSWWKLRGGGRDGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	235	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  A  G  M  T  F  S  S  Y  A  M  I  W  V  R  Q  A  P  G  K  G  L  
                    Query_834    1    GGTCCCTGAGACTCTCCTGTGCAGCCGCAGGAATGACCTTTAGCAGTTATGCCATGATCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.5% (235/246)  IGHV3-23*01  47   ..........................T.T...T.C...........C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  G  G  S  G  G  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_834    91   AGTGGGTCTCAGGTATTGGTGGGAGTGGTGGTGGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.5% (235/246)  IGHV3-23*01  137  ............C....A....T.........A.........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  K  G  P  F  S  S  S  
                    Query_834    181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTATATTACTGTGCGAGAAAGGGTCCGTTTAGCAGCAGCT  270
V  95.5% (235/246)  IGHV3-23*01  227  ....................................C.............................------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (14/14)   IGHD6-13*01  6    -------------------------------------------------------------------------------...........  16

                                      --CDR3-IMGT----------------------------->                                 
                                      W  W  K  L  R  G  G  G  R  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_834    271  GGTGGAAACTACGTGGGGGGGGGAGAGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
D  100.0% (14/14)   IGHD6-13*01  17   ...-----------------------------------------------------------------------  19
J  100.0% (47/47)   IGHJ6*02     16   ---------------------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_231536

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            330     1e-92
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAT	GAAGGGAC	TTACTATGACAGTACTGGTAATTA	TCC	CTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATGAAGGGACTTACTATGACAGTACTGGTAATTATCCCTTGGATTAT	VRDEGTYYDSTGNYPLDY	237	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	111	3	0	97.4
CDR3-IMGT (germline)	237	245	9	7	2	0	77.8
Total	N/A	N/A	233	222	11	0	95.3


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  D  D  H  A  I  H  W  V  R  Q  V  P  G  K  G  L  E  W  V  S  G  I  
                    Query_835    13   GTGCAGCCTCTGGATTCACGTTTGATGATCATGCCATCCACTGGGTCCGGCAAGTTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTA  102
V  95.3% (222/233)  IGHV3-9*01   65   ...................C.........T.......G................C...................................  154
                                         A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  W  N  S  G  S  K  G  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_835    103  GTTGGAATAGTGGCAGCAAAGGCTATGCGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTCTATCTGC  192
V  95.3% (222/233)  IGHV3-9*01   155  .............T....T....................A..........................................G.......  244
                                      S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------------CDR3-IMGT--------------
                                      Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  V  R  D  E  G  T  Y  Y  D  S  T  G  N  Y  P  
                    Query_835    193  AAATGAACAGTCTGAGAGTTGAGGACACGGCCTTGTATTACTGTGTAAGAGATGAAGGGACTTACTATGACAGTACTGGTAATTATCCCT  282
V  95.3% (222/233)  IGHV3-9*01   245  ..................C..........................C..A....-------------------------------------  297
                                      Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                                      
D  87.5% (21/24)    IGHD3-22*01  4    -------------------------------------------------------------.........T....G....T....-----  27
J  90.9% (40/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      L  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_835    283  TGGATTATTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  324
J  90.9% (40/44)    IGHJ4*02     7    .T..C..C......................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_231531

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           333     1e-93
IGHD1-7*01                                                                                            14.1    8.4  
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCAGTTT	GAACTAC	GGCCTTGGTGCAG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCAGTTTGAACTACGGCCTTGGTGCAGTTTTGATATT	ARHQFELRPWCSFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	232	19	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  N  Y  Y  W  G  W  I  R  R  P  P  G  K  G 
                    Query_836    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAATTACTACTGGGGCTGGATCCGCCGGCCCCCAGGGAAGGGA  90
V  92.4% (232/251)  IGHV4-39*01  49   .............................................A...G.......................A...............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  T  G  L  T  Y  Y  T  P  S  L  E  S  R  L  T  I  S  V  D  T  S 
                    Query_836    91   CTGGAGTGGATTGGGAGCATCTATTATACTGGGCTCACCTACTACACCCCGTCCCTCGAGAGTCGACTCACCATATCCGTGGACACGTCC  180
V  92.4% (232/251)  IGHV4-39*01  139  .................T..........G....AG...........A..........A........G.............A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  Q  F  S  L  S  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Q  F  E  L  R  P 
                    Query_836    181  AGAAACCAGTTCTCCCTGAGCCTCAGCTCTGTGACCGCCGCAGATACGGCTGTATATTACTGTGCGAGACATCAGTTTGAACTACGGCCT  270
V  92.4% (232/251)  IGHV4-39*01  229  .AG................AG..G....................C........G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD1-7*01   11   ------------------------------------------------------------------------------.......-----  17

                                      ----------------->                                  
                                       W  C  S  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_836    271  TGGTGCAGTTTTGATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  97.7% (43/44)    IGHJ3*02     7    --------.........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_231533

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           411     5e-117
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	276	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_837    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.5% (276/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  T  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_837    91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCACCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.5% (276/289)  IGHV5-51*03  96   ........G.......................A.......................T...........A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_837    181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.5% (276/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_837    271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.5% (276/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_837    361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_231532

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD6-13*01                                                                                           14.1    9.8   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGCG	GCAACACCTGGTA	TCGAGATTCTCAGGCCGGCAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGCGGCAACACCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGAC	ARHSGNTWYRDSQAGIYFDD	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  G  G  Y
                    Query_838    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCCCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCGGCTA  90
V  94.8% (276/291)  IGHV5-51*01  6    .............................................T....................................AC.A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_838    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAACCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ......................................................................................G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  R  S  L  G  T  A  Y  L  Q  W  P  S  L  K  A  S  D  T  A
                    Query_838    181  GTCCTTTCAAGGACAGGTCACCATCTCAGTCGACAGGTCCCTCGGAACCGCCTACCTGCAGTGGCCCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  ......C.....C................C.....A....A..A.C..................AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  Y  C  A  R  H  S  G  N  T  W  Y  R  D  S  Q  A  G  I  Y  F  D  D  W  G  Q  G  T  L
                    Query_838    271  CATGTACTACTGTGCGAGACACAGCGGCAACACCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGACTGGGGCCAGGGAACCCT  360
V  94.8% (276/291)  IGHV5-51*01  276  ......T..............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  84.6% (11/13)    IGHD6-13*01  8    --------------------------...G..G......---------------------------------------------------  20
J  95.7% (45/47)    IGHJ4*02     2    ------------------------------------------------------------......T...T...................  31

                                                       
                                        V  T  V  S  S  
                    Query_838    361  GGTCACCGTCTCCTCAG  377
J  95.7% (45/47)    IGHJ4*02     32   .................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_146371

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           355     3e-100
IGHD6-19*01                                                                                           14.1    8.2   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGTTTCACC	GTGGCTG	ATCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGTTTCACCGTGGCTGATCCTTTTGACTAC	ARGRFTVADPFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  S  T  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_839    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTCAGCACGTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  95.6% (238/249)  IGHV3-64*01  47   ................................T..........T.GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  T  I  S  S  N  G  E  S  T  H  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_839    91   AATATGTTTCAACTATTAGTAGTAATGGGGAGAGCACACATTATGCAAACTCTGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  95.6% (238/249)  IGHV3-64*01  137  ...........G..................GT......T...................................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  G  R  F  T  V  A  D  
                    Query_839    181  AGAACACGCTGTATCTTCAAATGGGCAGCCTGAGAGGTGAGGACACGGCTGTATATTACTGTGCGAGAGGCCGTTTCACCGTGGCTGATC  270
V  95.6% (238/249)  IGHV3-64*01  227  ....................................C........T......G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-19*01  11   --------------------------------------------------------------------------------.......---  17

                                      ---------->                                  
                                      P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_839    271  CTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (43/43)   IGHJ4*02     6    --...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_133213

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           39.1    3e-07
IGHJ2*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTGCCCATGA	ATTACTATGATAGTAGTGGCTCTTAC	ATTGGGAGCGTTA	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTGCCCATGAATTACTATGATAGTAGTGGCTCTTACATTGGGAGCGTTAGGTACTTCGATTTC	ARDVPMNYYDSSGSYIGSVRYFDF	238	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_840    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTTTTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   ........................................G.....AC........C............C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  A  K  N 
                    Query_840    91   TGGATTGGCTATGTCTATTCCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGCCGAGTCACCTTATCAGTGGACACGGCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G...A......A....................................T.........A.......A......T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------------C
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  V  P  M  N  Y  Y  D  S 
                    Query_840    181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATGTGCCCATGAATTACTATGATAGT  270
V  94.3% (231/245)  IGHV4-59*01  229  .............A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.3% (24/26)    IGHD3-22*01  3    ----------------------------------------------------------------------------..............  16

                                      DR3-IMGT------------------------------>                                  
                                       S  G  S  Y  I  G  S  V  R  Y  F  D  F  W  G  R  G  T  L  V  T  V  S  S  
                    Query_840    271  AGTGGCTCTTACATTGGGAGCGTTAGGTACTTCGATTTCTGGGGCCGTGGCACCCTGGTCACTGTCTCTTCAG  343
D  92.3% (24/26)    IGHD3-22*01  17   .....T.A....-------------------------------------------------------------  28
J  95.8% (46/48)    IGHJ2*01     6    -------------------------...........C...............................C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_75722

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           374     8e-106
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	ARPSSASGWHFDN	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	264	25	0	91.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_841    1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCAGTTA  90
V  91.3% (264/289)  IGHV5-51*03  6    .........................G.............G.........................G.........C.GC..T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  D  I  R  Y  S  P
                    Query_841    91   TGGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGATATTAGATATAGTCC  180
V  91.3% (264/289)  IGHV5-51*03  96   CT......G..................................................AT...GG...........CC.....C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  G
                    Query_841    181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGG  270
V  91.3% (264/289)  IGHV5-51*03  186  .............................C..A.AA........G............................................C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_841    271  CATGTATTACTGTGCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  91.3% (264/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_143874

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           353     1e-99
IGHD2-15*01                                                                                           14.1    9.0  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAC	GTAGTGG	CGTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCACGTAGTGGCGTCCTTGACTCC	ARSRSGVLDS	283	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	69	69	67	2	0	97.1
CDR1-IMGT	70	93	24	17	7	0	70.8
FR2-IMGT	94	144	51	48	3	0	94.1
CDR2-IMGT	145	168	24	20	4	0	83.3
FR3-IMGT	169	282	114	99	15	0	86.8
CDR3-IMGT (germline)	283	288	6	6	0	0	100
Total	N/A	N/A	288	257	31	0	89.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  N  K  Y 
                    Query_842    1    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCTGTGAAGGTCTCCTGTAAGGCTTCTGGCTACAGTTTTAATAAATAT  90
V  89.2% (257/288)  IGHV1-18*01  7    ............................................A..............C...........T....CC....CC.GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  L  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  S  S  G  N  T  N  Y  A  D 
                    Query_842    91   GGTATCAGTTGGGTGCGACTGGCCCCAGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTCCAGTGGAAACACAAACTATGCAGAC  180
V  89.2% (257/288)  IGHV1-18*01  97   ........C..........A......T..................................C..A..A...T...............C.G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  F  Q  D  R  V  I  M  T  R  N  T  S  T  T  T  A  Y  M  E  V  R  S  L  R  S  D  D  T  A 
                    Query_842    181  AGATTCCAGGACAGAGTCATCATGACCAGAAACACATCCACGACCACAGCCTACATGGAGGTGAGGAGCCTGCGATCCGACGACACGGCC  270
V  89.2% (257/288)  IGHV1-18*01  187  .AGC......G........C........C.G............G................C...........A....T............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------CDR3-IMGT--------->                                
                                       L  Y  Y  C  A  R  S  R  S  G  V  L  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_842    271  CTCTATTACTGTGCGAGATCACGTAGTGGCGTCCTTGACTCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  344
V  89.2% (257/288)  IGHV1-18*01  277  G.G...............--------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                         
D  100.0% (7/7)     IGHD2-15*01  9    ----------------------.......---------------------------------------------  15
J  95.0% (38/40)    IGHJ4*02     7    ----------------------------------......A...............C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_246707

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD3-16*02                                                                                           18.0    0.68  
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGAATGGCAAA	GGGAGCTATCTTTAT	TACTTT	TACAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGAATGGCAAAGGGAGCTATCTTTATTACTTTTACAGTATGGACGTC	ARHGNGKGSYLYYFYSMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  N  F  N  T  Y
                    Query_843    1    GCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAACTTTAACACCTA  90
V  95.5% (278/291)  IGHV5-51*01  6    ........................G....................................................G.....C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_843    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAATGGCTGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ..........................................G...A...........................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  L  Q  G  Q  V  T  I  S  V  D  M  S  T  S  T  A  Y  L  H  W  S  S  L  K  A  S  D  T  A
                    Query_843    181  GTCCCTCCAGGGCCAGGTCACCATCTCAGTCGACATGTCCACCAGCACCGCCTACCTGCACTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  ....T....A...................C.....A.....T..................G.............................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        V  Y  Y  C  A  R  H  G  N  G  K  G  S  Y  L  Y  Y  F  Y  S  M  D  V  W  G  Q  G  T  T  V
                    Query_843    271  CGTGTATTACTGTGCGAGACATGGGAATGGCAAAGGGAGCTATCTTTATTACTTTTACAGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  .A...................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  86.7% (13/15)    IGHD3-16*02  20   ----------------------------------.....T....G....-----------------------------------------  34
J  95.8% (46/48)    IGHJ6*02     15   -------------------------------------------------------...G...............................  49

                                                   
                                        T  V  S  S 
                    Query_843    361  CACCGTCTCGTCA  373
J  95.8% (46/48)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_223669

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           375     3e-106
IGHD6-19*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCCTACCCTTC	AGCAGTGGCTGG	GAAAAG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATCCCTACCCTTCAGCAGTGGCTGGGAAAAGCTTTGATTAC	ARDPYPSAVAGKSFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_844    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (245/250)  IGHV3-48*03  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  G  S  G  N  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_844    91   AGTGGGTTTCATACATTAGTGGTAGTGGTAATACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.0% (245/250)  IGHV3-48*03  137  ....................A.........G...........................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  P  Y  P  S  A  V  
                    Query_844    181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTTTATTACTGTGCGCGAGATCCCTACCCTTCAGCAGTGG  270
V  98.0% (245/250)  IGHV3-48*03  227  ........................................G........................A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD6-19*01  7    ----------------------------------------------------------------------------------........  14

                                      T------------------>                                  
                                      A  G  K  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_844    271  CTGGGAAAAGCTTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (12/12)   IGHD6-19*01  15   ....--------------------------------------------------  18
J  97.7% (43/44)    IGHJ4*02     5    ----------......C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_79202

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD3-16*02                                                                                           37.2    1e-06 
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGTC	CGTTTGGGGGAATTATCGTTAT	TTGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCGTTTGGGGGAATTATCGTTATTTGGGCTAC	ARGSVWGNYRYLGY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_845    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  96.2% (278/289)  IGHV5-51*01  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_845    91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  96.2% (278/289)  IGHV5-51*01  96   C...................................................A........................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  T  T  T  A  Y  L  Q  W  N  S  L  K  P  S  D  P  A
                    Query_845    181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCACCACTACCGCCTACCTGCAGTGGAACAGCCTAAAGCCCTCGGACCCCGC  270
V  96.2% (278/289)  IGHV5-51*01  186  .........................................T..GC...................G......G...G........A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  G  S  V  W  G  N  Y  R  Y  L  G  Y  W  G  Q  G  P  L  V  P  V  S  S  
                    Query_845    271  CATATATTACTGTGCGAGAGGGTCCGTTTGGGGGAATTATCGTTATTTGGGCTACTGGGGCCAGGGACCCCTGGTCCCCGTCTCCTCAG  359
V  96.2% (278/289)  IGHV5-51*01  276  ...G...............----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  95.5% (21/22)    IGHD3-16*02  13   ------------------------...........G..........-------------------------------------------  34
J  94.7% (36/38)    IGHJ4*02     11   ---------------------------------------------------................A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_21623

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           311     4e-87
IGHD1-1*01                                                                                            12.2    32   
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	TTTC	GGAACG	GTGGGTGCCCTAGTAGAT	TGGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATTTCGGAACGGTGGGTGCCCTAGTAGATTGGATCGACCCC	ANFGTVGALVDWIDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	223	24	0	90.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  T  N  F  A  M  T  W  V  R  Q  P  P  G  K  G  L  
                    Query_846    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTAACCTTTACCAACTTTGCCATGACCTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  90.3% (223/247)  IGHV3-23*01  47   ..................................C.......G..G..A........G.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  R  D  F  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_846    91   AGTGGGTCTCCTCTATTAGTGGCCGTGATTTTACGACATATTACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  90.3% (223/247)  IGHV3-23*01  137  ..........AG..........TA...G.GG..GC.....C...........C.................................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  S  L  R  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  N  F  G  T  V  G  A  L  
                    Query_846    181  AGAACACCCTATCTCTGCGAATGAACAGTCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAATTTCGGAACGGTGGGTGCCCTAG  270
V  90.3% (223/247)  IGHV3-23*01  227  .......G..G.A.....A.........C.......................A..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD1-1*01   10   -----------------------------------------------------------------------......-------------  15

                                      ---------------->                                  
                                      V  D  W  I  D  P  W  G  Q  G  P  L  V  T  V  S  S  
                    Query_846    271  TAGATTGGATCGACCCCTGGGGCCAGGGCCCCCTGGTCACCGTCTCCTCAG  321
J  93.5% (43/46)    IGHJ5*02     6    -----...T...................AA.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_93883

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           327     9e-92
IGHD4-17*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCGGGGAGAGATT	CTACGGTGACT	CGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCGGGGAGAGATTCTACGGTGACTCGGTTGACTAC	AKVGERFYGDSVDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  F  S  D  Y  D  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_847    1    GGTCCCTGAGACTCTCCTGTACAGCCTCAGGATTCATCTTTAGCGATTATGACCTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-23*01  47   ....................G.......T.......C.......AGC....C.A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  N  D  V  G  D  R  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  S  
                    Query_847    91   AGTGGGTCTCAACTATTAATGATGTTGGTGATAGGACATACTACGCAGACTCCGTGAAGGGCCGGTTCACTATCTCCAGAGACACTTCCA  180
V  92.0% (229/249)  IGHV3-23*01  137  ...........G......G..G.AG.....G...C...................................C.............A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  K  A  E  D  T  A  V  Y  Y  C  A  K  V  G  E  R  F  Y  G  
                    Query_847    181  AGAACACACTGTATCTGCAAATGAACAGCCTGAAAGCCGAGGACACGGCCGTATATTATTGTGCGAAAGTCGGGGAGAGATTCTACGGTG  270
V  92.0% (229/249)  IGHV3-23*01  227  .......G.........................G........................C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD4-17*01  4    ----------------------------------------------------------------------------------........  11

                                      ------------->                                  
                                      D  S  V  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_847    271  ACTCGGTTGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  318
D  100.0% (11/11)   IGHD4-17*01  12   ...---------------------------------------------  14
J  97.6% (41/42)    IGHJ4*02     7    ------..............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_93880

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           288     5e-80
IGHD2-21*02                                                                                           14.1    8.9  
IGHJ3*02                                                                                              39.1    6e-07


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGAGTCTTGGACCT	TGGTGAC	GGTCACTTCCACCAGATAGGTGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGAGTCTTGGACCTTGGTGACGGTCACTTCCACCAGATAGGTGTTTTTGACAAG	ARDGVLDLGDGHFHQIGVFDK	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  T  S  G  F  T  F  D  T  Y  G  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_848    1    GGTCCCTGAGACTCTCCTGTACAACGTCTGGATTCACCTTCGACACCTATGGCATGTATTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  86.8% (217/250)  IGHV3-33*01  47   ....................G..G.................AGT.G..........C.C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  W  H  D  G  S  Q  G  F  Y  G  D  S  V  K  G  R  F  S  V  S  R  D  N  S  
                    Query_848    91   AGTGGGTGGCAAGTATTTGGCATGATGGAAGCCAGGGGTTCTATGGAGACTCTGTGAAGGGCCGATTCTCCGTCTCCAGAGACAACTCCA  180
V  86.8% (217/250)  IGHV3-33*01  137  ...........GT...A...T..........TA.TAAA.A.....C......C...............A..A.............T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  G  R  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  V  L  D  L  G  
                    Query_848    181  AGAACACATTGTACTTGCAAATGGGCAGACTTAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGATGGAGTCTTGGACCTTGGTG  270
V  86.8% (217/250)  IGHV3-33*01  227  .......GC....TC........AA...C..G....................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-21*02  13   -------------------------------------------------------------------------------------.....  17

                                      DR3-IMGT-------------------------->                                  
                                      D  G  H  F  H  Q  I  G  V  F  D  K  C  G  Q  G  T  L  V  T  V  S  S  
                    Query_848    271  ACGGTCACTTCCACCAGATAGGTGTTTTTGACAAGTGTGGCCAAGGGACATTGGTGACTGTTTCTTCAG  339
D  100.0% (7/7)     IGHD2-21*02  18   ..-------------------------------------------------------------------  19
J  81.8% (36/44)    IGHJ3*02     7    -------------------------......T.TC..G............A....C..C..C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_21620

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATGATC	GTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATCGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDRGSYLYYFYGMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	106	8	0	93
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	279	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_849    2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCA  91
V  94.6% (279/295)  IGHV5-51*01  2    ..G..................................................................G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  I  M  Y  P  D  D  S  D  I  R  Y  
                    Query_849    92   GTTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATCGGGATCATGTATCCTGATGACTCTGATATCAGATACA  181
V  94.6% (279/295)  IGHV5-51*01  92   .C..........G.......................................G........C.......G...........C........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  G  T  A  Y  L  Q  W  R  S  L  K  A  P  D  
                    Query_849    182  GCCCGTCTTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCGGCACCGCCTACCTGCAGTGGAGGAGCCTGAAGGCCCCGGACC  271
V  94.6% (279/295)  IGHV5-51*01  182  .......C...C...................................A......................C............T.....A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      P  A  I  Y  F  C  A  R  H  G  D  D  R  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  P  G  T  
                    Query_849    272  CCGCCATATATTTCTGTGCGAGACATGGGGATGATCGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCCGGGGACCA  361
V  94.6% (279/295)  IGHV5-51*01  272  .......G....A............-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  90.9% (10/11)    IGHD1-26*01  7    ------------------------------------.......C...-------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------------.......A.......................AA.......  45

                                                       
                                      T  V  T  V  S  S 
                    Query_849    362  CGGTCACCGTCTCCTCA  378
J  94.7% (54/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_93886

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           297     8e-83
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCACCGGTGG	AGCAATGGCTGG	GGAACATACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCACCGGTGGAGCAATGGCTGGGGAACATACTATAATTACGGTATGGACGCC	ARGHRWSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	21	3	6	70
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	221	21	6	89.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  T  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_850    1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGCCCTTCACTGACAGTGGTTATTATTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  89.1% (221/248)  IGHV4-34*12  49   .......................C..T......T......------.......C..C....G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  I  D  T  S 
                    Query_850    91   CTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAACCCGTCCCTCCAGAGTCGAGTCACCATATCAATAGACACGTCC  180
V  89.1% (221/248)  IGHV4-34*12  133  .....G.............T.......AG.....G......................A....................G...........  222
                                       L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  W  S  N  G 
                    Query_850    181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGGGGCCACCGGTGGAGCAATGGC  270
V  89.1% (221/248)  IGHV4-34*12  223  ....................GC............C........................C........----------------------  290
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_850    271  TGGGGAACATACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  93.8% (45/48)    IGHJ6*02     15   ------------------.............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_21626

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           352     3e-99
IGHD3-22*01                                                                                           46.8    1e-09
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTACTATGATAGTAGTGGTTATTA	T	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACTATGATAGTAGTGGTTATTATTACTACGGTATGGATGTC	ARDYYDSSGYYYYGMDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	24	0	0	100
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	123	24	24	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	233	229	4	0	98.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 
                    Query_851    13   TGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATATATT  102
V  98.3% (229/233)  IGHV3-48*03  64   ......................................................................................C...  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  S  G  S  T  I  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_851    103  AGTAGTAGTGGTAGTACCATAAAGTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTG  192
V  98.3% (229/233)  IGHV3-48*03  154  .....................T.C..C...............................................................  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><--------------------CDR3-IMGT---------------
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  Y  D  S  S  G  Y  Y  Y  Y  G  M 
                    Query_851    193  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATTACTATGATAGTAGTGGTTATTATTACTACGGTATG  282
V  98.3% (229/233)  IGHV3-48*03  244  .....................................................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (24/24)   IGHD3-22*01  4    -----------------------------------------------------........................-------------  27
J  98.0% (50/51)    IGHJ6*02     12   ------------------------------------------------------------------------------............  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_851    283  GATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  321
J  98.0% (50/51)    IGHJ6*02     24   ..C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_21625

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           353     1e-99
IGHD4-4*01                                                                                            21.8    0.044
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-4*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAGGCGGGG	GACTACAGTAA	TTGGGGGGGGCTGGACTACCCAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAGGCGGGGGACTACAGTAATTGGGGGGGGCTGGACTACCCAGACTACGGTATGGACGTC	AKDKAGDYSNWGGLDYPDYGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  T  L  T  T  Y  A  M  S  W  V  R  L  G  P  G  K  R  L  
                    Query_852    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAGTCACTCTTACCACCTATGCCATGAGCTGGGTCCGCCTGGGTCCAGGGAAGCGGCTGG  90
V  95.2% (238/250)  IGHV3-23*01  47   ................................T....CT...G..G.......................A..C..........G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  N  G  V  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_852    91   AATGGGTCTCAGGTATTAGTGGTAATGGTGTTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (238/250)  IGHV3-23*01  137  .G..........C...........G.....G...........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  K  A  G  D  Y  S  
                    Query_852    181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATAAGGCGGGGGACTACAGTA  270
V  95.2% (238/250)  IGHV3-23*01  227  ......................................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD4-4*01   2    --------------------------------------------------------------------------------..........  11

                                      --CDR3-IMGT----------------------------->                                 
                                      N  W  G  G  L  D  Y  P  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_852    271  ATTGGGGGGGGCTGGACTACCCAGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
D  100.0% (11/11)   IGHD4-4*01   12   .-------------------------------------------------------------------------  12
J  100.0% (50/50)   IGHJ6*02     13   ------------------------..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_93885

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           358     4e-101
IGHD6-19*01                                                                                           16.1    2.4   
IGHJ2*01                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCCTCCCCGCGGTGCAAG	AGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCTCCCCGCGGTGCAAGAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARLLPAVQEWLPGDWYFDL	261	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	19	5	0	79.2
FR2-IMGT	75	125	51	46	5	0	90.2
CDR2-IMGT	126	146	21	18	3	0	85.7
FR3-IMGT	147	260	114	110	4	0	96.5
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	248	19	0	92.9


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  S  V  S  G  D  S  I  T  R  S  Y  W  S  W  I  R  
                    Query_853    1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCACTAGAAGCTACTGGAGCTGGATTCGGC  90
V  92.9% (248/267)  IGHV4-59*08  26   ................T.........................C...........G........G...TTA...............C....  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  E  R  L  E  W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_853    91   AGCCCCCAGGGGAGAGACTGGAGTGGATAGCGTATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  92.9% (248/267)  IGHV4-59*08  116  ...........A..G.............T.G.......T...........AG......................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  L  D  T  S  K  N  Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  L  
                    Query_853    181  TATCACTAGACACGTCCAAGAACCAGTTCTCCCTGAAGATGACCTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGACTCC  270
V  92.9% (248/267)  IGHV4-59*08  206  .....G................................C...G.........................G..................---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      --------------CDR3-IMGT----------------------->                                  
                                      L  P  A  V  Q  E  W  L  P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_853    271  TCCCCGCGGTGCAAGAGTGGCTGCCAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCGTCAG  351
D  100.0% (8/8)     IGHD6-19*01  10   ---------------........----------------------------------------------------------  17
J  96.1% (49/51)    IGHJ2*01     3    ------------------------------......................................A.......C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_143870

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            344     6e-97
IGHD6-13*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTT	GCAGAAGCTGGT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTGCAGAAGCTGGTTTTGACGAC	ARLAEAGFDD	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_854    1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTGGATTCACCTTTAGTAGATACTGGATGAGTTGGGTCCGCCAGGCTCCAGGTAAGGGGCTGG  90
V  94.4% (234/248)  IGHV3-7*01   47   .....................C..C.....................C..T........C....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  H  D  G  S  E  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_854    91   AGTGGGTGGCCAACATAAAACATGATGGAAGTGAGACATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  94.4% (234/248)  IGHV3-7*01   137  ...................G..A.............A.................................................G...  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  V  Q  M  N  S  L  R  V  D  D  T  G  V  Y  Y  C  A  R  L  A  E  A  G  F  D  
                    Query_854    181  AGAACTCACTGTATGTGCAAATGAACAGCCTGAGAGTCGACGACACGGGTGTGTATTACTGTGCGAGACTTGCAGAAGCTGGTTTTGACG  270
V  94.4% (234/248)  IGHV3-7*01   227  ..............C.....................C...G.......C...................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD6-13*01  8    -----------------------------------------------------------------------....C.......-------  19
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------......T  12

                                      ->                                  
                                      D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_854    271  ACTGGGGCCAGGGAACCCTGGTCACCGTGTCCTCAG  306
J  95.3% (41/43)    IGHJ4*02     13   ............................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_21629

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           324     8e-91
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CTGACGAC	GTAGTGGTTATTAC	CACTCTCCCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCTGACGACGTAGTGGTTATTACCACTCTCCCGTTTGACTAC	AKADDVVVITTLPFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  Y  A  M  S  W  V  R  Q  A  P  G  G  G  L  
                    Query_855    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCCACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGGGGGGCCTGG  90
V  91.6% (228/249)  IGHV3-23*01  47   ............................................AG..................................AA...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  T  G  S  G  T  N  T  Y  Y  R  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_855    91   AGTGGGTCTCAGGTATTACTGGTAGTGGTACTAACACATACTACAGAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  91.6% (228/249)  IGHV3-23*01  137  ............C.....G..........GG..G..........GC........................................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  I  L  E  M  N  G  L  R  A  E  D  T  A  I  Y  Y  C  A  K  A  D  D  V  V  V  I  
                    Query_855    181  AGAACACACTTATTCTGGAAATGAACGGCCTGAGAGCCGAGGACACGGCCATATATTATTGTGCGAAAGCTGACGACGTAGTGGTTATTA  270
V  91.6% (228/249)  IGHV3-23*01  227  .......G..GTA....C........A.......................G.......C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (14/14)   IGHD3-22*01  15   -----------------------------------------------------------------------------.............  27

                                      T------------------>                                  
                                      T  T  L  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_855    271  CCACTCTCCCGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (14/14)   IGHD3-22*01  28   .-----------------------------------------------------  28
J  100.0% (43/43)   IGHJ4*02     6    -----------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_21628

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD1-26*01                                                                                           12.2    33   
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGAAAGCAC	ATAGTG	ACCACTAAATGGATGGT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGAAAGCACATAGTGACCACTAAATGGATGGTTGATGCTTTTGATAAC	AKRKHIVTTKWMVDAFDN	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  A  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_856    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGCCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTAG  90
V  92.3% (229/248)  IGHV3-23*01  47   .........................................AG..............G..............................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  M  S  G  S  G  A  E  T  Y  L  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_856    91   AGTGGGTCTCAGGTATGAGTGGTAGTGGTGCTGAAACATACCTCGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCCGAGACAATTCCA  180
V  92.3% (229/248)  IGHV3-23*01  137  ............C...T.............G.AGC......TA..................................A............  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  F  L  E  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  R  K  H  I  V  T  T  
                    Query_856    181  AGAACACACTATTTCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATATTATTGTGCGAAAAGAAAGCACATAGTGACCACTA  270
V  92.3% (229/248)  IGHV3-23*01  227  .......G..G.A....C................................G.......C.........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-26*01  4    -----------------------------------------------------------------------------......-------  9

                                      IMGT--------------------->                                  
                                      K  W  M  V  D  A  F  D  N  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_856    271  AATGGATGGTTGATGCTTTTGATAACTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  330
J  98.0% (49/50)    IGHJ3*02     1    ----------..............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_240898

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           327     9e-92
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAG	GTCGAGGGAG	TGACTACGGT	AGACT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGGTCGAGGGAGTGACTACGGTAGACTCTACTTTGACTAC	AKGRGSDYGRLYFDY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	101	51	44	4	3	86.3
CDR2-IMGT	102	125	24	19	5	0	79.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	249	231	15	3	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  I  S  W  V  R  R  A  P  G  K  G  L  
                    Query_857    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATGCCATCAGCTGGGTCCGCCGGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-23*01  47   ...........................................C.G.........G.............A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S     M  I  G  G  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_857    91   AATGGATCTCA---ATGATTGGTGGTGGTGGAACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  177
V  92.8% (231/249)  IGHV3-23*01  137  .G...G.....GCT..T.G....A.......T.G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  G  R  G  S  D  Y  G  
                    Query_857    178  AGAACACCCTGTATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCCAAAGGTCGAGGGAGTGACTACGGTA  267
V  92.8% (231/249)  IGHV3-23*01  227  .......G...............A..........................G.............G....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD4-17*01  1    -------------------------------------------------------------------------------..........-  10

                                      ---------------->                                  
                                      R  L  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_857    268  GACTCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (47/47)   IGHJ4*02     2    ----...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_240899

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           325     3e-91
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGGGAA	AACGAC	TGGGATCGTAGGTGGTCCGGT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGGGAAAACGACTGGGATCGTAGGTGGTCCGGTTTTCACTTC	ASRENDWDRRWSGFHF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_858    1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.0% (225/242)  IGHV4-59*08  49   ....................T......................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       L  I  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S  R  N 
                    Query_858    91   TTGATTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGTCGACTCACCATCTCAGTAGACACGTCGAGGAAC  180
V  93.0% (225/242)  IGHV4-59*08  139  .G......G...A........A........A.....................A.......G.......A..............C.A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  S  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  N  D  W  D  R  R  W 
                    Query_858    181  CAGTTCTCCCTGAGCGTGAACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCGAGCCGGGAAAACGACTGGGATCGTAGGTGG  270
V  93.0% (225/242)  IGHV4-59*08  229  .............AGC...G.........C................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD1-1*01   12   ---------------------------------------------------------------------......---------------  17

                                      -------------->                                  
                                       S  G  F  H  F  W  G  P  G  T  L  I  T  V  S  S  
                    Query_858    271  TCCGGTTTTCACTTCTGGGGCCCGGGAACCCTGATCACCGTCTCCTCAG  319
J  90.7% (39/43)    IGHJ4*02     6    ------...G...A........A..........G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_284837

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           375     3e-106
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCCCGGCAGG	GTGGGATCTACT	TG	ACGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTC	RDMARQGGIYLTLWTS	280	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	66	67	62	4	1	92.5
CDR1-IMGT	67	90	24	20	4	0	83.3
FR2-IMGT	91	141	51	49	2	0	96.1
CDR2-IMGT	142	165	24	23	1	0	95.8
FR3-IMGT	166	279	114	104	10	0	91.2
CDR3-IMGT (germline)	280	287	8	8	0	0	100
Total	N/A	N/A	288	266	21	1	92.4


Alignments

                                      <----------------------------FR1-IMGT-----------------------------><-------CDR1-IMGT------
                                        Q  V  Q   L  V  Q  R  *  K  S  R  G  S  L  *  R  S  P  V  R  V  L  D  T  T  L  T  V  T  
                    Query_859    1    GCAGGTGCAG-CTGGTGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGTTCTGGATACAACTTTAACAGTAACTG  89
V  92.4% (266/288)  IGHV5-51*01  9    ..T.......T....A.................C.............A..........................G.....C...CT....  98
                                        L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W

                                      ><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-------------
                                      G  S  D  G  C  A  R  C  P  G  K  A  W  S  G  W  G  S  S  T  L  V  T  L  I  P  D  I  G  R  
                    Query_859    90   GATCGGATGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTACCCTGGTGACTCTGATACCAGATATAGGCCGTC  179
V  92.4% (266/288)  IGHV5-51*01  99   ......C..........................................A.......T.......................C..C.....  188
                                        I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                      P  S  K  A  T  S  P  L  Q  P  T  S  P  P  P  P  P  T  C  G  G  A  A  *  R  P  R  T  P  P  
                    Query_859    180  CTTCCAAGGCCACGTCACCATTACAGCCGACAAGTCCACCACCACCGCCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACACCGCCAC  269
V  92.4% (266/288)  IGHV5-51*01  189  ............G........CT...............T..G..............A................................T  278
                                        F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M

                                      ---------><-------------------CDR3-IMGT------------------>                                
                                      L  I  T  V  R  D  M  A  R  Q  G  G  I  Y  L  T  L  W  T  S  G  A  K  G  P  R  S  P  S  P  
                    Query_859    270  TTATTACTGTGCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  359
V  92.4% (266/288)  IGHV5-51*01  279  G.................------------------------------------------------------------------------  296
                                        Y  Y  C  A  R                                                                           
D  91.7% (11/12)    IGHD1-26*01  7    ------------------------------......G.....------------------------------------------------  18
J  97.9% (46/47)    IGHJ6*02     16   --------------------------------------------...G..........................................  61

                                       
                                       
                    Query_859    360  A  360
J  97.9% (46/47)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_61716

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           355     3e-100
IGHD3-9*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              62.2    6e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	CCGAG	TGACTGGTTATTATA	GCGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGCCGAGTGACTGGTTATTATAGCGGC	ASRVTGYYSG	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_860    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAACTACTGGATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (237/247)  IGHV3-74*01  47   .............................................G........................A...................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  Y  G  T  T  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_860    91   TGTGGGTCTCACGTATCAATAGTTATGGGACTACCACAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (237/247)  IGHV3-74*01  137  ................T......G......G..G.....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  R  V  T  G  Y  Y  S  
                    Query_860    181  AGAACACGCTGTATCTGCAGATGAACAGTCTGAGAGCCGAGGACACGGCTGTATACTACTGTGCAAGCCGAGTGACTGGTTATTATAGCG  270
V  96.0% (237/247)  IGHV3-74*01  227  ...................A................................G..T...........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (15/15)   IGHD3-9*01   15   ------------------------------------------------------------------------...............---  29

                                      ->                                  
                                      G  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_860    271  GCTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  306
J  97.1% (34/35)    IGHJ4*02     14   -..................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_181111

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           293     2e-81
IGHJ1*01                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	N/A	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GGGCGGGACTTG	TCCAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGAAGAGGGGCGGGACTTGTCCAGGAT	GRGAGLVQD	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	218	31	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  D  F  S  N  Y  F  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_861    1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCGACTTCAGTAATTATTTCATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  87.6% (218/249)  IGHV3-74*01  47   .....................C.............AC........GC..C.GG.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  H  S  N  S  G  E  S  I  T  E  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_861    91   TGTGGGTCTCACACAGCAACAGTGGTGAGAGTATTACAGAATATGTGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  87.6% (218/249)  IGHV3-74*01  137  ............GT.TT..T....A..G.....GC...AGC..C.C............................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  G  R  G  A  G  L  V  Q  D  
                    Query_861    181  AGAACACATTGTATCTGCAAATGAACAGTCTGAGGGTCGACGACACGGCTGTATACTATTGTGGAAGAGGGGCGGGACTTGTCCAGGATT  270
V  87.6% (218/249)  IGHV3-74*01  227  .......GC.........................A.C...G...........G..T..C....C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  92.9% (39/42)    IGHJ1*01     11   ---------------------------------------------------------------------------------.....C.C.  19

                                                                       
                                      W  G  Q  G  T  L  V  S  V  S  S  
                    Query_861    271  GGGGCCAGGGCACCCTGGTCAGCGTCTCCTCAG  303
J  92.9% (39/42)    IGHJ1*01     20   .....................C...........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_181110

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           308     4e-86
IGHD1-26*01                                                                                           18.0    0.58 
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGATACAACGAAA	TATACTGGGACCTAC	GATGGG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGATACAACGAAATATACTGGGACCTACGATGGGTTCGATCTC	ARDDTTKYTGTYDGFDL	235	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	120	21	15	3	3	71.4
FR3-IMGT	121	234	114	106	8	0	93
CDR3-IMGT (germline)	235	242	8	8	0	0	100
Total	N/A	N/A	245	223	19	3	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  L  S  G  V  S  I  S  G  Y  Y  W  H  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_862    1    ACCCTGTCCCTCACCTGCTCTCTCTCTGGTGTCTCCATCAGTGGTTACTACTGGCACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.0% (223/245)  IGHV4-59*01  49   ..................A..G.........G..........A...........AG..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N     S  G  G  T  K  Y  S  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_862    91   TGGATCGGCTATATCAAT---AGCGGGGGCACCAAGTACAGTCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  177
V  91.0% (223/245)  IGHV4-59*01  139  .....T..G......T..TAC..T...A.......C....AC..........A.....................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  F  Y  Y  C  A  R  D  D  T  T  K  Y  T  G  T 
                    Query_862    178  CAGTTCTCCCTGAAACTGACCTCTGTGACCGCTGCGGACACGGCCTTTTATTACTGTGCGAGAGACGATACAACGAAATATACTGGGACC  267
V  91.0% (223/245)  IGHV4-59*01  229  ..............G....G.........................G.G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  86.7% (13/15)    IGHD1-26*01  3    ------------------------------------------------------------------------------....G.....G.  14

                                      ----------------->                                  
                                       Y  D  G  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_862    268  TACGATGGGTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  319
D  86.7% (13/15)    IGHD1-26*01  15   ...-------------------------------------------------  17
J  100.0% (43/43)   IGHJ2*01     11   ---------...........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_181113

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           300     8e-84
IGHD1-1*01                                                                                            18.0    0.54 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GTC	TACAACTGG	CGGGAGGGGGCGTTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTCTACAACTGGCGGGAGGGGGCGTTCACTAC	GLQLAGGGVHY	230	262	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	230	1	1	0	0	100
Total	N/A	N/A	218	205	13	0	94


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  I  I  W  Y  D
                    Query_863    13   GTCTGGATTCACCTTCAGCAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAATTATATGGTATGA  102
V  94.0% (205/218)  IGHV3-33*01  72   ..................T.GC......................................................G.............  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  H  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_863    103  TGGAAGTAACAAACACTATGCAGACTCCGTCCAGGGCCGATTCACCATATCCAGAGACAATTCCAAGAACACGTTGTATCTGCAAATGAA  192
V  94.0% (205/218)  IGHV3-33*01  162  .........T...T................GA................C........................C................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------CDR3-IMGT----------->                    
                                        S  L  R  V  D  D  T  A  V  Y  Y  C  G  L  Q  L  A  G  G  G  V  H  Y  R  G  Q  G  T  L  V
                    Query_863    193  CAGCCTGAGAGTCGACGACACGGCTGTATATTACTGTGGTCTACAACTGGCGGGAGGGGGCGTTCACTACAGGGGCCAGGGAACCCTGGT  282
V  94.0% (205/218)  IGHV3-33*01  252  ...........C...G...........G..........----------------------------------------------------  289
                                        S  L  R  A  E  D  T  A  V  Y  Y  C                                                      
D  100.0% (9/9)     IGHD1-1*01   3    -----------------------------------------.........----------------------------------------  11
J  97.4% (38/39)    IGHJ4*02     10   -----------------------------------------------------------------.....T...................  34

                                                    
                                        T  V  S  S  
                    Query_863    283  CACCGTCTCCTCAG  296
J  97.4% (38/39)    IGHJ4*02     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_92899

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATCGTGGTG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATCGTGGTGACTACTTTGACCAC	ARGLHYYDRGDYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_864    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (242/250)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_864    91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAATAAGTCCCTCAAGAGTCGAATTACCATATCGGTAGACACGTCT  180
V  96.8% (242/250)  IGHV4-31*03  139  ..................................G............CCC................G..........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R 
                    Query_864    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCCATTACTATGATCGT  270
V  96.8% (242/250)  IGHV4-31*03  229  .....................................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (16/18)    IGHD3-22*01  3    ----------------------------------------------------------------------------...........A..  16

                                      ----------------->                                  
                                       G  D  Y  F  D  H  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_864    271  GGTGACTACTTTGACCACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  322
D  88.9% (16/18)    IGHD3-22*01  17   A...------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    ----...........T.......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_181115

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           406     1e-115
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ2*01                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGA	TACTATGACAGTAGTGGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTC	ARDGYYDSSGYYYDL	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  T  S  V  K  V  S  C  K  A  S  S  Y  S  F  S  S  H 
                    Query_865    2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGACCTCAGTGAAGGTCTCCTGCAAGGCTTCTAGTTACAGTTTTAGCAGCCAC  91
V  94.8% (275/290)  IGHV1-18*04  7    .......................................G.............................G......CC....C....T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  D  Y  A  R 
                    Query_865    92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGGTGGATCAGCGGTTACAATGGTAACACAGACTATGCACGG  181
V  94.8% (275/290)  IGHV1-18*04  97   ................................A.................A..........C................A.........A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  A  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  T  S  D  D  T  A 
                    Query_865    182  AAGTTCCAGGGCAGAGTCACCATGACCGCAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGACATCTGACGACACGGCC  271
V  94.8% (275/290)  IGHV1-18*04  187  ...C.......................A.............................................G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  D  G  Y  Y  D  S  S  G  Y  Y  Y  D  L  W  G  R  G  T  L  V  T  V  S  S 
                    Query_865    272  GTGTATTACTGTGCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTCTGGGGCCGGGGAACCCTGGTCACTGTCTCCTCA  361
V  94.8% (275/290)  IGHV1-18*04  277  ...............A....----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  95.2% (20/21)    IGHD3-22*01  5    ------------------------........T............---------------------------------------------  25
J  91.3% (42/46)    IGHJ2*01     8    ---------------------------------------------....T...T...........T..C.....................  52

                                       
                                       
                    Query_865    362  G  362
J  91.3% (42/46)    IGHJ2*01     53   .  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_181114

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            374     7e-106
IGHD1-1*01                                                                                            10.3    113   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	TACAA	TA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTACAATAACTTTGACTAC	ARGYNNFDY	241	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	112	2	0	98.2
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	243	4	0	98.4


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  V  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_866   1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCGTCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  98.4% (243/247)  IGHV4-4*01  49   .......................C............A.....................................................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  K  S  K 
                    Query_866   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAAGTCCAAG  180
V  98.4% (243/247)  IGHV4-4*01  139  ..................................................................A.......................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->   
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  N  N  F  D  Y  W 
                    Query_866   181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTACAATAACTTTGACTACTGG  270
V  98.4% (243/247)  IGHV4-4*01  229  .......................................................G...........-----------------------  295
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (5/5)     IGHD1-1*01  3    ---------------------------------------------------------------------.....----------------  7
J  100.0% (45/45)   IGHJ4*02    4    ----------------------------------------------------------------------------..............  17

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_866   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (45/45)   IGHJ4*02    18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_181117

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-9*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCGGTT	GTATTACGATATCTTG	CGGCGGGGAGG	CTACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGTTGTATTACGATATCTTGCGGCGGGGAGGCTACAACGGTTTGGACGTC	ARGRLYYDILRRGGYNGLDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  V  G  S  F  S  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_867    1    ACCCTGTCCCTCACCTGCGCTGTCTATGTTGGGTCCTTCAGTGATTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (233/245)  IGHV4-34*01  49   ............................G..............G..............................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  N  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_867    91   TGGATTGGCGAAATCAATCATAGTGGATCCAACAGCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  ........G..................AG..C..A.......................................A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  D  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  L  Y  Y  D  I  L  R 
                    Query_867    181  CAGTTCTCCCTGAAGCTGGACTCCGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCCGGTTGTATTACGATATCTTGCGG  270
V  95.1% (233/245)  IGHV4-34*01  229  ..................AG...T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  93.8% (15/16)    IGHD3-9*01   1    -----------------------------------------------------------------------............T...---  16

                                      GT------------------------>                                 
                                       R  G  G  Y  N  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_867    271  CGGGGAGGCTACAACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
J  96.2% (50/52)    IGHJ6*02     11   --------....T.....A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_181119

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           369     2e-104
IGHD1-1*01                                                                                            18.0    0.64  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCTT	TACAACTGG	GTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCTTTACAACTGGGTTTTTGACTTC	ARGLYNWVFDF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	263	27	0	90.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  D  T  F  T  S  Y
                    Query_868    1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCGGGGTCCTCGGTGAGGGTCTCCTGCAAGGCTTCTGGAGACACCTTCACTAGTTA  90
V  90.7% (263/290)  IGHV1-69*01  6    ..................G.................T.............A.......................G........GC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        S  I  S  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  G  I  I  P  R  F  G  T  K  N  Y  A  Q
                    Query_868    91   CAGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGAGGCATCATCCCCAGGTTTGGTACAAAGAATTACGCACA  180
V  90.7% (263/290)  IGHV1-69*01  96   TGC...................................T...............G........T.TC.........GCA..C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  G  P  T  S  T  V  Y  M  D  L  S  S  L  T  S  E  D  T  A
                    Query_868    181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGGACCCACGAGCACAGTCTACATGGACCTGAGCAGCCTGACATCTGAGGACACGGC  270
V  90.7% (263/290)  IGHV1-69*01  186  ...................................A.T............C.........G.............G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                 
                                        T  Y  Y  C  A  R  G  L  Y  N  W  V  F  D  F  W  G  Q  G  S  L  V  T  V  S  S 
                    Query_868    271  CACATATTACTGTGCGAGAGGGCTTTACAACTGGGTTTTTGACTTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCA  349
V  90.7% (263/290)  IGHV1-69*01  276  .GTG................-----------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                             
D  100.0% (9/9)     IGHD1-1*01   3    -------------------------.........---------------------------------------------  11
J  95.2% (40/42)    IGHJ4*02     6    -------------------------------------.......A.............A....................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_181118

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     4e-93
IGHD3-10*01                                                                                           37.2    1e-06
IGHJ5*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TACTTC	CTATGGGTCGGGGAGTTTTTATAAC	TCCCCGT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATACTTCCTATGGGTCGGGGAGTTTTTATAACTCCCCGTACTGGTTTGACTCC	AKDTSYGSGSFYNSPYWFDS	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  A  M  N  W  V  R  Q  V  P  G  K  G  L  
                    Query_869    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACACCTATGCCATGAACTGGGTCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-23*01  47   ..........................................G..G...........G..............C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  M  S  G  H  G  G  I  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_869    91   AGTGGGTCTCAGGCATGAGTGGTCATGGTGGTATCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.4% (231/250)  IGHV3-23*01  137  ............CT..T......AG........G....T...................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  S  T  L  Y  L  V  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  T  S  Y  G  S  G  
                    Query_869    181  AGAGCACGCTCTATCTGGTCATGAATAGCCTGAGAGCCGAGGACACGGCCGTTTACTACTGTGCGAAAGATACTTCCTATGGGTCGGGGA  270
V  92.4% (231/250)  IGHV3-23*01  227  ...A......G......CAA.....C..........................A..T..............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.0% (23/25)    IGHD3-10*01  7    ----------------------------------------------------------------------------......T.......  20

                                      R3-IMGT------------------------>                                  
                                      S  F  Y  N  S  P  Y  W  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_869    271  GTTTTTATAACTCCCCGTACTGGTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  92.0% (23/25)    IGHD3-10*01  21   ...A.......-------------------------------------------------------  31
J  95.8% (46/48)    IGHJ5*01     4    ------------------.......C..............A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_97644

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           380     1e-107
IGHD5-18*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	GGATACACCTATGGT	CA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGATACACCTATGGTCATGACTAC	AREGYTYGHDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  F  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  G  P  F  S  S  Y
                    Query_870    1    GCAGCTGGTGCAGTCTGGAGCCGAGTTTAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGCAAGGCCTCTGGCGGCCCCTTCAGCAGTTA  90
V  91.8% (267/291)  IGHV1-69*01  6    ..................G..T...G.G......................A...............T.....A...A..........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  I  R  Q  A  P  G  L  G  L  E  W  M  G  G  I  I  P  I  L  G  P  A  N  Y  A  V
                    Query_870    91   CGCTATTAGCTGGATTCGACAGGCCCCTGGACTAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCCTTGGTCCAGCAAACTACGCAGT  180
V  91.8% (267/291)  IGHV1-69*01  96   T.....C......G.G................A..................................T.....A..............CA  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  L  E  V  K  S  L  R  S  E  D  T  A
                    Query_870    181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACTTGGAGGTGAAAAGCCTGCGATCTGAGGACACGGC  270
V  91.8% (267/291)  IGHV1-69*01  186  .......................................................A.....C...GC......A................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                
                                        V  Y  Y  C  A  R  E  G  Y  T  Y  G  H  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_870    271  CGTGTATTATTGTGCGAGAGAAGGATACACCTATGGTCATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  348
V  91.8% (267/291)  IGHV1-69*01  276  .........C...........---------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                            
D  93.3% (14/15)    IGHD5-18*01  3    ----------------------.......G.......-----------------------------------------  17
J  100.0% (39/39)   IGHJ4*02     8    ---------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_13684

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            272     2e-75
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	95	19	0	83.3
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	210	36	0	85.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_871    1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  85.4% (210/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  S  M  S  V  D  K  S  K 
                    Query_871    91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGCCGAGTCAGCATGTCAGTAGACAAGTCCAAG  180
V  85.4% (210/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A....T.......C...A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  N  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_871    181  AATCAATTCTCCCTCACGCTGACGTCTCTGAACGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  85.4% (210/246)  IGHV4-4*01   229  ..C..G........G.A.....GC...G...C..................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_871    271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_97647

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           296     2e-82
IGHD3-10*01                                                                                           12.2    31   
IGHJ2*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGA	CGGGGA	TTGGAAG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGACGGGGATTGGAAGTTCGATCTC	ARHDGDWKFDL	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	220	31	0	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  I  S  S  R  F  F  W  G  W  L  R  Q  P  P  K  K  G 
                    Query_872    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCATCAGTAGTCGTTTCTTCTGGGGCTGGCTCCGCCAGCCCCCAAAGAAGGGG  90
V  87.6% (220/251)  IGHV4-39*01  49   ...............................G........G.......A...A..A..........A..............GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  H  D  S  G  N  R  W  S  N  P  T  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_872    91   CTGGAGTGGATTGGGACTATCCATGACAGTGGGAACAGATGGTCCAACCCGACCCTCAAGAGTCGACTCACCATATCGGTGGACACGTCC  180
V  87.6% (220/251)  IGHV4-39*01  139  ................G....T..T.T.......G..CC.AC.A.......T..............G..........C..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       M  N  Q  F  S  L  T  I  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  H  D  G  D  W  K  F 
                    Query_872    181  ATGAACCAGTTCTCCCTGACGATTTCCTCTATGACCGCCGCTGACACGGCTGTCTATTACTGTGCGAGACATGACGGGGATTGGAAGTTC  270
V  87.6% (220/251)  IGHV4-39*01  229  .A.................A.C.GAG....G..........A...........G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01  15   --------------------------------------------------------------------------......----------  20
J  95.3% (41/43)    IGHJ2*01     11   ---------------------------------------------------------------------------------------...  13

                                      ----->                                  
                                       D  L  W  G  R  G  S  Q  V  T  V  S  S  
                    Query_872    271  GATCTCTGGGGCCGTGGCTCCCAGGTCACTGTCTCCTCAG  310
J  95.3% (41/43)    IGHJ2*01     14   ..................A...T.................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_97641

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD6-19*01                                                                                           21.8    0.046
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCGGGGCCAACGGGCGGTAAGGCATGC	CAGTGGCTGGT	TCGCGGTTGGGAATCCCAACGACGATTATTATC	ACGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGGGCCAACGGGCGGTAAGGCATGCCAGTGGCTGGTTCGCGGTTGGGAATCCCAACGACGATTATTATCACGGGATGGACGTC	ARGRGQRAVRHASGWFAVGNPNDDYYHGMDV	238	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  E  S  F  S  G  Y  F  W  T  W  I  R  Q  P  P  G  T  G  L  E 
                    Query_873    1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGAGTCCTTCAGTGGTTACTTCTGGACTTGGATCCGCCAGCCCCCAGGGACGGGGCTGGAG  90
V  94.7% (232/245)  IGHV4-34*01  49   ...............................G.................A.....GC......................A..........  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  T  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_873    91   TGGATTGGGGAAATAAATCATAGTGGAAGCACCACCTACAGCCCGTCCCTCAAGAGTCGAGTCACCATCTCCGTAGACACGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-34*01  139  ..............C...................A.....A...........................A..A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  G  R  G  Q  R  A  V  R  H 
                    Query_873    181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCGGACACGGCTCTGTATTATTGTGCGAGAGGCCGGGGCCAACGGGCGGTAAGGCAT  270
V  94.7% (232/245)  IGHV4-34*01  229  ...............C.............................G.......C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      ---------CDR3-IMGT----------------------------------------->                              
                                       A  S  G  W  F  A  V  G  N  P  N  D  D  Y  Y  H  G  M  D  V  W  G  Q  G  T  T  V  R  V  S 
                    Query_873    271  GCCAGTGGCTGGTTCGCGGTTGGGAATCCCAACGACGATTATTATCACGGGATGGACGTCTGGGGCCAAGGGACCACGGTCCGCGTCTCG  360
D  100.0% (11/11)   IGHD6-19*01  9    --...........-----------------------------------------------------------------------------  19
J  91.5% (43/47)    IGHJ6*02     16   ----------------------------------------------....T..............................AC......C  59

                                         
                                       S 
                    Query_873    361  TCA  363
J  91.5% (43/47)    IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_97642

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         338     5e-95
IGHD3-9*01                                                                                            27.6    8e-04
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GTCTCGGA	GATATTTTGACTGG	GGCAGGACTGGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGTCTCGGAGATATTTTGACTGGGGCAGGACTGGGCGAC	ARGLGDILTGAGLGD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  N  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_874      1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAATAGTGGTGGTTATTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  93.2% (233/250)  IGHV4-30-4*01  49   ..................A.....................GC.......A...C........T...........................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  M  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  G  D  T  S 
                    Query_874      91   CTGGAGTGGATTGGATACATGTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTGACCATTTCTGGAGACACGTCC  180
V  93.2% (233/250)  IGHV4-30-4*01  139  ..............G.....C.............G.................................T.....A..A.T..........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         T  D  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  G  D  I  L  T 
                    Query_874      181  ACGGACCAGTTCTCCCTGAAGCTGACCTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCCAGAGGTCTCGGAGATATTTTGACT  270
V  93.2% (233/250)  IGHV4-30-4*01  229  .A.A.....................G.................................C..........--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (14/14)   IGHD3-9*01     8    ------------------------------------------------------------------------------............  19

                                        ----------------->                                  
                                         G  A  G  L  G  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_874      271  GGGGCAGGACTGGGCGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (14/14)   IGHD3-9*01     20   ..--------------------------------------------------  21
J  100.0% (36/36)   IGHJ4*02       13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_13685

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           388     5e-110
IGHD6-13*01                                                                                           14.1    9.2   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCACGTGG	GGGTATA	TGGAT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGGTATATGGATTAC	ARDLTWGYMDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  P  E  V  K  K  P  G  A  S  I  K  V  S  C  K  A  S  G  Y  P  F  T  T  F 
                    Query_875    2    CAGCTGGTGCAGTCTGGACCTGAGGTGAAGAAGCCTGGGGCCTCAATAAAGGTCTCCTGCAAGGCTTCTGGTTACCCCTTTACCACCTTT  91
V  92.8% (269/290)  IGHV1-18*01  7    ..................G..........................G.G...........................A.........G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  T  G  R  I  N  T  F  N  G  N  T  N  Y  A  Q 
                    Query_875    92   GGTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGACGGGAAGGATCAACACTTTCAATGGTAACACAAACTATGCACAG  181
V  92.8% (269/290)  IGHV1-18*01  97   .......G......................................T....T......G.G...A.........................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  Y  E  D  T  A 
                    Query_875    182  AAATTCCAGGGCAGAGTCACCCTGACCACGGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTAAGATATGAGGACACGGCC  271
V  92.8% (269/290)  IGHV1-18*01  187  ..GC.................A.......A.........................................G....C...C.........  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  M  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_875    272  ATATATTACTGTGCGAGAGATCTCACGTGGGGGTATATGGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  92.8% (269/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (7/7)     IGHD6-13*01  1    ------------------------------.......------------------------------------------  7
J  100.0% (37/37)   IGHJ4*02     12   ------------------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_97648

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         294     6e-82
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAC	TACTATGATAGTAGTGGTT	CGTACTCCGAATC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACTACTATGATAGTAGTGGTTCGTACTCCGAATCTGATGCTTTTGATATC	ARHYYDSSGSYSESDAFDI	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  E  V  S  G  F  T  F  S  S  F  G  F  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_876      1    GGTCCCTGAGACTCTCCTGTGAAGTCTCTGGATTCACCTTCAGTTCTTTTGGTTTCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  87.9% (218/248)  IGHV3-30-3*01  47   .....................C..C...................AGC.A..C.A.G..................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  L  I  S  F  D  G  D  N  R  L  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_876      91   AGTGGGTGGCTCTTATTTCTTTTGATGGAGACAACAGATTATACGCAGACTCCGTGAAGGGGCGATTCACCGTCTCGAGAGACAATTCCA  180
V  87.9% (218/248)  IGHV3-30-3*01  137  ..........AG....A..A.A.......AG...T.A..AC....................C.........A....C.............  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                        K  N  S  L  Y  L  Q  L  N  S  L  T  A  D  D  T  A  V  Y  Y  C  A  R  H  Y  Y  D  S  S  G  
                    Query_876      181  AGAACTCGCTCTATCTACAACTGAACAGCCTGACAGCTGACGACACGGCTGTCTATTACTGTGCGAGACACTACTATGATAGTAGTGGTT  270
V  87.9% (218/248)  IGHV3-30-3*01  227  .....A....G.....G...A............G......G...........G...............----------------------  294
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (19/19)   IGHD3-22*01    5    -----------------------------------------------------------------------...................  23

                                        -IMGT----------------------->                                
                                        S  Y  S  E  S  D  A  F  D  I  W  G  Q  G  T  L  V  T  V  S  S
                    Query_876      271  CGTACTCCGAATCTGATGCTTTTGATATCTGGGGCCAGGGGACACTAGTCACCGTCTCTTC  331
J  93.8% (45/48)    IGHJ3*02       1    -------------........................A......A.G..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_227703

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGATCGGGGAAATATTAT	GCTCAAA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGATCGGGGAAATATTATGCTCAAAAC	ARGHSYGSGKYYAQN	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_877    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ...............................G.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_877    91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGGGTTACCATATCAGTTGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ........................................A........................A..............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  F  L  R  L  S  P  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  S  Y  G  S  G 
                    Query_877    181  AAGAACCAGTTCTTCTTGAGGCTGAGCCCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTCCTATGGATCGGGG  270
V  96.4% (241/250)  IGHV4-31*03  229  .............C.C...A.......T..........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD3-10*01  7    -----------------------------------------------------------------------------......T......  19

                                      ----------------->                                  
                                       K  Y  Y  A  Q  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_877    271  AAATATTATGCTCAAAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  86.4% (19/22)    IGHD3-10*01  20   .GT......-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_53448

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           399     2e-113
IGHD2-8*02                                                                                            12.2    34    
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	A	GTACTG	ACACC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTACTGACACCGACTAT	ARSTDTDY	283	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	69	68	66	2	0	97.1
CDR1-IMGT	70	93	24	22	2	0	91.7
FR2-IMGT	94	144	51	49	2	0	96.1
CDR2-IMGT	145	168	24	20	4	0	83.3
FR3-IMGT	169	282	114	108	6	0	94.7
CDR3-IMGT (germline)	283	288	6	6	0	0	100
Total	N/A	N/A	287	271	16	0	94.4


Alignments

                                      <-----------------------------FR1-IMGT-----------------------------><-------CDR1-IMGT-----
                                         L  V  Q  S  G  A  E  V  R  K  P  G  D  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y  
                    Query_878    2    AGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCGGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTACT  91
V  94.4% (271/287)  IGHV5-51*03  8    ...........................A............G..................................G........G.....  97
                                         L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  

                                      -><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------------
                                      W  I  G  W  A  R  Q  R  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  A  T  T  R  Y  S  P  
                    Query_878    92   GGATCGGCTGGGCGCGCCAGAGGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACGCTACTACCAGATACAGCCCGT  181
V  94.4% (271/287)  IGHV5-51*03  98   ............T........T...............................A..............T..GA.................  187
                                      W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  

                                      ----------------------------------------FR3-IMGT------------------------------------------
                                      S  F  E  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  S  A  
                    Query_878    182  CGTTCGAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACAGCGCCA  271
V  94.4% (271/287)  IGHV5-51*03  188  .C...C..............A................................C..............................C.....  277
                                      S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  

                                      ----------><-------CDR3-IMGT------>                                  
                                      M  Y  Y  C  A  R  S  T  D  T  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_878    272  TGTATTATTGTGCGAGAAGTACTGACACCGACTATTGGGGCCAGGGCACCCTGGTCATCGTCTCCTCAG  340
V  94.4% (271/287)  IGHV5-51*03  278  .......C.........----------------------------------------------------  294
                                      M  Y  Y  C  A  R                                                     
D  100.0% (6/6)     IGHD2-8*02   9    ------------------......---------------------------------------------  14
J  92.5% (37/40)    IGHJ4*02     9    -----------------------------.....C...........A..........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_53449

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD2-15*01                                                                                           12.2    32   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAT	TAGCTG	TATCCGCGCCCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTAGCTGTATCCGCGCCCTACTACTTTGACTAC	ARRLAVSAPYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  T  N  S  N  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_879    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCACCAATAGTAATTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.4% (236/250)  IGHV4-39*01  49   ...............................G........G..G.....G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  H  T  P 
                    Query_879    91   CTGGAGTGGATTGCGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGCACACGCCC  180
V  94.4% (236/250)  IGHV4-39*01  139  .............G..................................................................AG.....T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  V  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  R  L  A  V  S  A  P 
                    Query_879    181  AAGAACCAGTTCTCCCTGAGGGTGACCTCTGTGACCGCCGCAGACACGGCTCTATATTACTGTGCGAGACGATTAGCTGTATCCGCGCCC  270
V  94.4% (236/250)  IGHV4-39*01  229  ...................A.C...G.........................G.G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-15*01  19   -------------------------------------------------------------------------......-----------  24

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  S  L  V  A  V  S  S  
                    Query_879    271  TACTACTTTGACTACTGGGGCCAGGGATCCCTGGTCGCCGTCTCCTCAG  319
J  95.8% (46/48)    IGHJ4*02     1    -..........................A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_25814

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         300     9e-84
IGHD2-15*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GGAGAGGGCTGTCGCGCTT	TTGTAGTGCTGGT	TCCTGCGAACTCTC	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGGGAGAGGGCTGTCGCGCTTTTGTAGTGCTGGTTCCTGCGAACTCTCCGGTATGGACGTC	ATGRGLSRFCSAGSCELSGMDV	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  V  V  S  G  G  S  I  T  S  G  A  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_880      1    ACCCTGTCCCTCACCTGCGTTGTCTCTGGTGGCTCCATTACCAGTGGGGCTTCCTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  88.4% (221/250)  IGHV4-30-4*01  49   ..................AC..................C.G......T.A..A.....................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  N  I  H  H  S  G  N  T  Y  Y  N  P  S  L  N  S  R  I  T  I  S  I  D  R  S 
                    Query_880      91   CTGGAGTGGATTGGGAACATCCATCACAGCGGGAACACCTACTACAACCCGTCCCTCAACAGTCGGATTACCATATCCATAGATAGGTCC  180
V  88.4% (221/250)  IGHV4-30-4*01  139  ...............T.....T..T....T....G........................G.....AG..........AG....C.C....  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------------
                                         K  N  Q  V  S  L  N  L  N  S  A  T  V  A  D  T  A  V  Y  Y  C  A  T  G  R  G  L  S  R  F 
                    Query_880      181  AAAAACCAGGTCTCCCTGAACCTGAACTCTGCAACAGTCGCGGACACGGCCGTGTATTACTGTGCCACAGGGAGAGGGCTGTCGCGCTTT  270
V  88.4% (221/250)  IGHV4-30-4*01  229  ..G......T..........G....G.....TG..T.C...A.........................G..--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD2-15*01    7    -----------------------------------------------------------------------------------------.  7

                                        --CDR3-IMGT--------------------------->                                 
                                         C  S  A  G  S  C  E  L  S  G  M  D  V  W  G  Q  G  T  A  V  A  V  S  S 
                    Query_880      271  TGTAGTGCTGGTTCCTGCGAACTCTCCGGTATGGACGTCTGGGGCCAAGGGACCGCGGTCGCCGTCTCCTCA  342
D  92.3% (12/13)    IGHD2-15*01    8    .......G....------------------------------------------------------------  19
J  95.7% (44/46)    IGHJ6*02       17   --------------------------............................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_25815

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           265     5e-73
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	GCCCACCGGGTG	AGCAATGGCTGG	GGAAGGTACTATAATAAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCCCACCGGGTGAGCAATGGCTGGGGAAGGTACTATAATAATGGTATGGACGCC	ARAHRVSNGWGRYYNNGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	20	4	6	66.7
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	211	32	6	84.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  T  A  N  D  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_881    1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCTTTCACTGCCAATGATTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  84.7% (211/249)  IGHV4-34*12  49   .......................C..T........C....G..G------...C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G        Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  H  L  G  G  A  K  Y  N  P  S  L  Q  S  R  V  T  I  S  L  D  T  S 
                    Query_881    91   CTGGAATGGATAGGGGAAATCATTCATCTTGGAGGCGCCAAGTACAACCCGTCCCTCCAGAGTCGAGTTACCATTTCACTAGACACGTCC  180
V  84.7% (211/249)  IGHV4-34*12  133  .....G.....T...............AG....A..A....C...............A..........C.....A...G...........  222
                                       L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  N  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  A  H  R  V  S  N  G 
                    Query_881    181  AAGAATCAATTCTCCCTGAAATTGAATTCTGTTAGCGCCGCGGACACGGCTGTGTATTATTGTGCAAGAGCCCACCGGGTGAGCAATGGC  270
V  84.7% (211/249)  IGHV4-34*12  223  .....C..G...........GC...GC.....G.C........................C.....G...---------------------  291
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  R  Y  Y  N  N  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_881    271  TGGGGAAGGTACTATAATAATGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  93.3% (42/45)    IGHJ6*02     18   ---------------------..........T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_303629

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           294     6e-82
IGHD3-10*02                                                                                           21.8    0.039
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	N/A	GTATTAATATGTTC	AAGGCGTAT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGGTATTAATATGTTCAAGGCGTATTTCGACCCC	AGGINMFKAYFDP	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	217	29	0	88.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  V  S  R  N  Y  M  S  W  V  R  L  A  P  G  Q  G  L  
                    Query_882    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCAGTGTCAGCCGCAACTACATGAGTTGGGTCCGCCTGGCTCCAGGACAGGGGCTGG  90
V  88.2% (217/246)  IGHV3-53*01  47   ....................................CC.....TA.............C..........A.........GA.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  I  Y  V  G  G  W  T  Y  Y  S  E  S  V  K  G  R  F  T  I  S  T  D  D  S  K  
                    Query_882    91   AGTGGGTCTCGCTCATTTATGTCGGTGGTTGGACATATTACTCAGAGTCCGTGAAGGGCCGATTCACCATCTCCACAGACGATTCCAAGA  180
V  88.2% (217/246)  IGHV3-53*01  137  ..........AG.T......AG.......A.C.....C...G....C............................G....A.........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------CDR3-IMGT-------
                                      N  T  L  Y  L  Q  M  T  G  L  R  D  E  D  T  A  M  Y  Y  C  A  G  G  I  N  M  F  K  A  Y  
                    Query_882    181  ACACCTTGTATCTTCAAATGACTGGCCTGAGAGACGAGGACACGGCCATGTATTATTGTGCGGGAGGTATTAATATGTTCAAGGCGTATT  270
V  88.2% (217/246)  IGHV3-53*01  227  ....GC...............ACA.........C.............G.......C......A...------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  92.9% (13/14)    IGHD3-10*02  1    ------------------------------------------------------------------......C.......----------  14
J  97.7% (42/43)    IGHJ5*02     9    -----------------------------------------------------------------------------------------.  9

                                      ------->                                  
                                      F  D  P  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_882    271  TCGACCCCTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  312
J  97.7% (42/43)    IGHJ5*02     10   .............................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_25817

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         349     2e-98
IGHD5-12*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGAGGAT	TGGCTACGA	GACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGACCCCCTTTGACCTC	ARAGRIGYETPFDL	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_883      1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTACTCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  95.1% (235/247)  IGHV4-38-2*02  49   ................................................T.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K 
                    Query_883      91   GAGTGGATTGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAG  180
V  95.1% (235/247)  IGHV4-38-2*02  139  ......................A.........C.........A..............A........................C.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  Q  F  S  L  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  T 
                    Query_883      181  AACCAGTTCTCGTTGAATCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGAGCGGGGAGGATTGGCTACGAGACC  270
V  95.1% (235/247)  IGHV4-38-2*02  229  ...........CC....G....G...........C...............G................-----------------------  295
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD5-12*01    11   -----------------------------------------------------------------------------.........----  19

                                        ----------->                                  
                                         P  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_883      271  CCCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.5% (42/44)    IGHJ4*02       5    --.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_158948

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           308     4e-86
IGHD3-9*01                                                                                            44.9    5e-09
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGACTTCA	TACGATATTTTGACTGGTTATTA	ACAGGTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGACTTCATACGATATTTTGACTGGTTATTAACAGGTCTTGACTTT	ARGDFIRYFDWLLTGLDF	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	221	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  K  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_884    1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCGTTCAAAGGTTACTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAA  90
V  90.2% (221/245)  IGHV4-34*01  49   ...................................C....GT.......A.....G.................................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  D  Y  N  G  E  T  D  Y  S  P  S  L  K  S  R  V  S  I  S  V  D  T  T  K  N 
                    Query_884    91   TGGATTGGGGAAATCGATTATAATGGAGAAACCGACTATAGTCCGTCCCTCAAGAGTCGAGTCAGCATATCAGTAGACACGACCAAGAAC  180
V  90.2% (221/245)  IGHV4-34*01  139  ...............A..C...G....AGC...A....C.AC......................C................T........  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  M  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  D  F  I  R  Y  F  D  W 
                    Query_884    181  CAGTTCTCCCTGAAGATGACGTCTGTTAGCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGACTTCATACGATATTTTGACTGG  270
V  90.2% (221/245)  IGHV4-34*01  229  ...............C...GC.....G.C..................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (23/23)   IGHD3-9*01   5    -------------------------------------------------------------------------.................  21

                                      -------------------->                                  
                                       L  L  T  G  L  D  F  W  G  R  G  T  L  V  T  V  S  S  
                    Query_884    271  TTATTAACAGGTCTTGACTTTTGGGGCCGGGGAACCCTGGTCACTGTCTCCTCAG  325
D  100.0% (23/23)   IGHD3-9*01   22   ......-------------------------------------------------  27
J  90.5% (38/42)    IGHJ4*02     7    -------------......AC.......A...............C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_158949

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           417     6e-119
IGHD1-20*01                                                                                           29.5    2e-04 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-20*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGAAAA	TATAACTGGAACGAC	GGAAT	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATC	ARVGKYNWNDGIAFDI	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	72	3	0	96
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	281	14	0	95.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N 
                    Query_885    2    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAAC  91
V  95.3% (281/295)  IGHV1-69*01  1    .....G.................G.......................C........................................G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  F  A  V  N  W  V  R  Q  A  P  G  H  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  K  Y 
                    Query_885    92   AGCTTTGCTGTCAACTGGGTGCGACAGGCCCCTGGACATGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAACAAAATAC  181
V  95.3% (281/295)  IGHV1-69*01  91   ....A....A...G........................A..........................................G....C...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  V  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_885    182  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGGACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGAC  271
V  95.3% (281/295)  IGHV1-69*01  181  ..................................................C....C..................................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  V  G  K  Y  N  W  N  D  G  I  A  F  D  I  W  G  Q  G  T  I  V  T 
                    Query_885    272  ACGGCCGTTTATTATTGTGCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATCTGGGGCCAAGGGACAATAGTCACC  361
V  95.3% (281/295)  IGHV1-69*01  271  ........G.....C..........-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (15/15)   IGHD1-20*01  3    ---------------------------------...............------------------------------------------  17
J  95.7% (45/47)    IGHJ3*02     4    -----------------------------------------------------...T..........................G......  40

                                                
                                       V  S  S  
                    Query_885    362  GTCTCTTCAG  371
J  95.7% (45/47)    IGHJ3*02     41   ..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_60338

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD3-22*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATG	GTATTATTCTGATAACAGTGGTTATT	T	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATGGTATTATTCTGATAACAGTGGTTATTTCTTTGACTCC	AREWYYSDNSGYFFDS	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_886    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  90.6% (222/245)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  G  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_886    91   TGGCTTGGATATGGCTATGACAGTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCCGCAGACACGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  ...A....G...AT....T..........C.........................................A.T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  W  Y  Y  S  D  N  S  G 
                    Query_886    181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGAATGGTATTATTCTGATAACAGTGGT  270
V  90.6% (222/245)  IGHV4-59*01  229  ...T...............G...........................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (22/26)    IGHD3-22*01  1    --------------------------------------------------------------------......C.A.....GT......  22

                                      -------------->                                  
                                       Y  F  F  D  S  W  G  P  G  T  R  V  T  V  S  S  
                    Query_886    271  TATTTCTTTGACTCCTGGGGCCCGGGAACCCGGGTCACCGTCTCCTCAG  319
D  84.6% (22/26)    IGHD3-22*01  23   ....---------------------------------------------  26
J  93.2% (41/44)    IGHJ4*02     5    -----........A........A........T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_25813

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            300     8e-84
IGHD1-7*01                                                                                            14.1    8.2  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAACTTTCGCGACATAT	GAACTAC	A	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAACTTTCGCGACATATGAACTACATATGGACGTC	AKTFATYELHMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	218	26	0	89.3


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  N  N  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_887   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCGTCAGCAGTAATAATTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  89.3% (218/244)  IGHV4-4*02  49   ..................G..........T......A.........G...C.......G...............................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  N  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  M  S  M  A  K  L  K 
                    Query_887   91   GAGTGGATTGGCGAAATTTATCATAATGGCAACACCAACTACAACCCGTCCCTCCAGAGTCGGGTCACCATGTCAATGGCCAAGTTGAAG  180
V  89.3% (218/244)  IGHV4-4*02  139  ...........G.....C.......G...G.G......................A.......A........A...G.A.A.....CC...  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                      N  Q  F  F  L  K  L  N  D  V  T  A  A  D  T  A  V  Y  Y  C  A  K  T  F  A  T  Y  E  L  H 
                    Query_887   181  AATCAGTTCTTCCTGAAACTGAACGATGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAAAACTTTCGCGACATATGAACTACAT  270
V  89.3% (218/244)  IGHV4-4*02  229  ..C.......C......G....G.TC........................G.............--------------------------  292
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD1-7*01  11   ---------------------------------------------------------------------------------.......--  17
J  97.7% (42/43)    IGHJ6*02    20   -----------------------------------------------------------------------------------------.  20

                                     -------->                                 
                                      M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_887   271  ATGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  312
J  97.7% (42/43)    IGHJ6*02    21   ...............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_158944

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_888    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  96.4% (239/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_888    91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  96.4% (239/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_888    181  AAGAACCAGTTCTCCCTGAGGCTCAGCTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  96.4% (239/248)  IGHV4-31*03  229  ...................A...G................................T...........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_888    271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_158945

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            332     3e-93
IGHD1-26*01                                                                                           10.3    121  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTGCCAT	GGAGC	AATGGACCCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTGCCATGGAGCAATGGACCCAATACTACTTTGACGCC	ARSAMEQWTQYYFDA	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_889    1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAGTAGTTATTGGATGACCTGGGTCCGCCAGGCTCCAGGTAAGGGGCTGG  90
V  92.7% (230/248)  IGHV3-7*01   47   .....................C........................C..........G.....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  V  E  Y  Y  V  D  S  V  R  G  R  F  T  M  S  R  D  N  A  
                    Query_889    91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGTGGAATACTACGTGGACTCTGTGAGGGGCCGATTCACCATGTCCAGAGACAACGCCA  180
V  92.7% (230/248)  IGHV3-7*01   137  ....................C............A.A.......T.............A...............C................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  S  V  S  L  Q  M  S  S  L  T  A  E  D  T  A  V  Y  Y  C  A  R  S  A  M  E  Q  W  T  
                    Query_889    181  GGAACTCAGTCTCTCTGCAAATGAGCAGCCTGACAGCCGAGGACACGGCTGTATACTACTGTGCGAGATCTGCCATGGAGCAATGGACCC  270
V  92.7% (230/248)  IGHV3-7*01   227  A.......C.G.A...........A........G..................G..T............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  10   ----------------------------------------------------------------------------.....---------  14

                                      ---------------->                                
                                      Q  Y  Y  F  D  A  W  G  Q  G  T  L  V  T  V  S  S
                    Query_889    271  AATACTACTTTGACGCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
J  95.7% (44/46)    IGHJ4*02     1    ---...........TA.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_303621

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-2*02                                                                                            44.9    5e-09 
IGHJ5*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAACC	ATATTGTAGTAGTTCCAGCTGCTATA	N/A	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAACCATATTGTAGTAGTTCCAGCTGCTATATGGTTCGACCCC	ARGNHIVVVPAAIWFDP	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_890    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_890    91   CTGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAATTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T..................................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  N  H  I  V  V  V 
                    Query_890    181  AAGAATCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGAACCATATTGTAGTAGTT  270
V  98.4% (246/250)  IGHV4-31*03  229  .....C....................C...........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  96.2% (25/26)    IGHD2-2*02   4    ----------------------------------------------------------------------------.............A  17

                                      MGT-------------------->                                  
                                       P  A  A  I  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_890    271  CCAGCTGCTATATGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  96.2% (25/26)    IGHD2-2*02   18   ............----------------------------------------------  29
J  100.0% (46/46)   IGHJ5*02     6    ------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_158947

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           307     1e-85
IGHD1-26*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTCGGC	GGGAGCTA	TCCAGACCG	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATGTCGGCGGGAGCTATCCAGACCGCTATTATTACTACGGCGCGGACGTC	AKDVGGSYPDRYYYYGADV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  Q  F  R  S  F  G  M  H  W  V  R  Q  A  L  G  K  G  L  
                    Query_891    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCAGTTCAGAAGCTTTGGCATGCACTGGGTCCGCCAGGCTCTTGGCAAGGGACTGG  90
V  89.2% (223/250)  IGHV3-30*18  47   ...................................ACC.....T....A..........................CA........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  F  D  G  T  T  Q  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  A  
                    Query_891    91   AGTGGGTGGCGGTTATATCATTTGATGGAACTACACAATATTATGCAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATGCCA  180
V  89.2% (223/250)  IGHV3-30*18  137  ..........A..........A........G..ATA....C............................C................T...  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  V  D  L  R  M  H  S  L  G  P  D  D  T  A  L  Y  Y  C  A  K  D  V  G  G  S  Y  P  
                    Query_891    181  AGAACACGGTGGATCTGCGAATGCACAGTCTGGGACCTGACGACACGGCTTTGTATTACTGTGCAAAAGATGTCGGCGGGAGCTATCCAG  270
V  89.2% (223/250)  IGHV3-30*18  227  ........C..T......A....A....C...A..G....G.........G.............G.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD1-26*01  9    -----------------------------------------------------------------------------........-----  16

                                      -IMGT----------------------->                              
                                      D  R  Y  Y  Y  Y  G  A  D  V  W  G  R  G  T  T  V  T  V  S 
                    Query_891    271  ACCGCTATTATTACTACGGCGCGGACGTCTGGGGCCGAGGAACCACGGTCACCGTCTCC  329
J  87.3% (48/55)    IGHJ6*02     5    ----...C..C........TAT..............A...G..................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_158940

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           327     9e-92
IGHD2-8*01                                                                                            21.8    0.042
IGHJ2*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-8*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAGG	GGATATTGTAC	AAGTTCCCGGTGCTCTATGA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAGGGGATATTGTACAAGTTCCCGGTGCTCTATGAACTTCGATCTC	ARGRGYCTSSRCSMNFDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  L  S  D  Y  A  M  N  W  V  R  Q  P  P  G  K  G  L  
                    Query_892    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCCTCAGTGACTATGCCATGAATTGGGTCCGCCAACCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-21*01  47   ....................................C.T.....AG....AG......C...........GG..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  R  S  S  I  Y  I  F  Y  A  D  S  L  E  G  R  F  T  I  S  R  D  D  A  
                    Query_892    91   AGTGGGTCTCATCCATTAGTCGTAGTAGTATTTACATTTTCTACGCAGACTCATTGGAGGGCCGATTCACCATCTCCAGAGACGACGCCA  180
V  92.0% (229/249)  IGHV3-21*01  137  ....................A.........G......A.A.............G..A..........................A......  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  D  L  Q  M  N  S  L  R  D  E  D  T  A  F  Y  Y  C  A  R  G  R  G  Y  C  T  S  
                    Query_892    181  AGAACTCACTGGATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTTTCTATTACTGTGCGAGAGGGAGGGGATATTGTACAAGTT  270
V  92.0% (229/249)  IGHV3-21*01  227  ...........T........................C.............G.G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD2-8*01   2    --------------------------------------------------------------------------...........-----  12

                                      IMGT--------------------->                                  
                                      S  R  C  S  M  N  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_892    271  CCCGGTGCTCTATGAACTTCGATCTCTGGGGCCGTGGCACCCTCGTCACTGTCTCCTCAG  330
J  97.8% (44/45)    IGHJ2*01     9    ---------------............................G................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_158941

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           322     2e-90
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  P  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_893    1    GGTCCCCGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-21*01  47   ......T.....................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  S  T  R  D  N  A  
                    Query_893    91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCAGCACCAGAGACAACGCCA  180
V  91.2% (228/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A................................T.T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_893    181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  91.2% (228/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_893    271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_60330

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           388     5e-110
IGHD3-3*01                                                                                            14.1    8.9   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTCC	ARGAGGLFIFVAPFDS	261	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	23	1	0	95.8
FR2-IMGT	75	125	51	50	1	0	98
CDR2-IMGT	126	146	21	21	0	0	100
FR3-IMGT	147	260	114	108	6	0	94.7
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	258	10	0	96.3


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  
                    Query_894    1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCC  90
V  96.3% (258/268)  IGHV4-34*01  26   ........T.......T.......................................................A.................  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  L  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  R  R  V  T  
                    Query_894    91   AGCTCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGACGAGTCACCC  180
V  96.3% (258/268)  IGHV4-34*01  116  ...C...........................................................................T.........A  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      L  S  A  D  T  S  K  N  R  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_894    181  TATCAGCAGACACGTCCAAGAACCGGCTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCG  270
V  96.3% (258/268)  IGHV4-34*01  206  ......T.................A.T...........................................G.................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  

                                      ----------CDR3-IMGT------------------>                                  
                                      A  G  G  L  F  I  F  V  A  P  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_894    271  CAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
D  100.0% (7/7)     IGHD3-3*01   9    --------------.......---------------------------------------------------  15
J  97.7% (42/43)    IGHJ4*02     6    -----------------------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_158943

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           299     3e-83
IGHD3-10*01                                                                                           12.2    33   
IGHJ4*02                                                                                              41.1    2e-07


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGATAGAT	GGGGATTTA	GGCAACACGCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGATAGATGGGGATTTAGGCAACACGCCTGACTTC	ARAPIDGDLGNTPDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	220	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  K  S  Y  W  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_895    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTTCATTCAAGAGTTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAGGGGGCTGG  90
V  88.4% (220/249)  IGHV3-74*01  47   ..................................CA.C....GT..C..................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  A  R  I  D  S  Y  G  S  D  T  F  Y  A  G  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_895    91   TTTGGGTCGCGCGTATTGATAGTTACGGAAGTGACACCTTCTATGCGGGCTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCG  180
V  88.4% (220/249)  IGHV3-74*01  137  .G......T.A......A.....G.T..G...AG...AAG...C....A...............A........................A  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  T  L  S  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  F  C  A  R  A  P  I  D  G  D  L  
                    Query_895    181  AGAACACGCTGTCTCTGCAGATGAACAGTCTGAGAGTCGACGACACGGCTGTGTATTTCTGTGCGAGAGCCCCGATAGATGGGGATTTAG  270
V  88.4% (220/249)  IGHV3-74*01  227  ............A......A................C...G................A......A....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD3-10*01  16   --------------------------------------------------------------------------------.....G...-  24

                                      ---------------->                                
                                      G  N  T  P  D  F  G  G  Q  G  V  L  V  S  V  S  S
                    Query_895    271  GCAACACGCCTGACTTCGGGGGCCAGGGGGTCCTGGTCTCCGTCTCCTC  319
J  84.6% (33/39)    IGHJ4*02     8    ----------.....A.T..........AAC.......A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_302574

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            333     1e-93
IGHD3-16*01                                                                                           12.2    30   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	N/A	TGGGGG	GGGCGGGATGGCAACCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGGGGGGCGGGATGGCAACCCGACTAC	VGGAGWQPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  L  I  F  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_896    1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGACTCATCTTTAGTGACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.8% (228/243)  IGHV3-7*01   47   ....................G...........T...C.......AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  E  Q  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_896    91   AGTGGGTGGCCAACATAGAGCAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.8% (228/243)  IGHV3-7*01   137  .................A....................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  V  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  V  G  G  A  G  W  Q  P  D  
                    Query_896    181  AGAATTCAGTGTTTCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCTGTGTACTTTTGTGTGGGGGGGGCGGGATGGCAACCCGACT  270
V  93.8% (228/243)  IGHV3-7*01   227  ....C...C...A............C.............................T.AC....---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (6/6)     IGHD3-16*01  17   ---------------------------------------------------------------......---------------------  22
J  100.0% (38/38)   IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                
                                      Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_896    271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  304
J  100.0% (38/38)   IGHJ4*02     13   ..................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_302575

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           319     2e-89
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAG	TGGAACGAC	GGG	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGAGTGGAACGACGGGGACGAC	ARHEWNDGDD	246	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  D  S  I  S  N  N  L  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_897    4    CCCTGAGACTCTCCTGTAGTGTCTCTGGAGACTCCATCAGCAATAATCTTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  90.8% (227/250)  IGHV4-39*01  50   .....TCC...A....C.C.........T.G...........G..G.AG.......................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  A  I  Y  Y  T  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_897    94   TGGAGTGGATTGGAGCTATCTATTATACTGGAAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCA  183
V  90.8% (227/250)  IGHV4-39*01  140  .............GAG...........G...G.G........................................................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  K  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  E  W  N  D  G  D  
                    Query_897    184  AGAACAAGTTCTCCCTGAAGCTGACCTCTGTCACCGCCGCAGACACGGCTGTGTACTACTGTGCGAGACATGAGTGGAACGACGGGGACG  273
V  90.8% (227/250)  IGHV4-39*01  230  .....C..................G......G.......................T..............--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD1-1*01   9    --------------------------------------------------------------------------.........-------  17
J  97.5% (39/40)    IGHJ4*02     9    --------------------------------------------------------------------------------------...T  12

                                      ->                                  
                                      D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_897    274  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.5% (39/40)    IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_302576

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           399     3e-113
IGHD1-26*01                                                                                           14.1    9.3   
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	TGGGAGC	CATGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGGAGCCATGCACTACTCCGGTATGGACGTC	ARLGAMHYSGMDV	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  S  F  R  T  Y
                    Query_898    1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCTCCTTCAGGACCTA  90
V  94.1% (272/289)  IGHV1-69*06  6    ..................G.........................................................A.......C.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        T  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  N  I  I  T  I  F  G  T  A  D  Y  A  Q
                    Query_898    91   TACTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGCTGGGAAACATCATCACTATCTTTGGTACAGCAGACTACGCACA  180
V  94.1% (272/289)  IGHV1-69*06  96   .G............................................A.....GGG......C.................A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  K  F  E  D  T  A
                    Query_898    181  GAACTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGTACAGCCTATATGGAGCTGAGCAGCCTGAAATTTGAGGACACGGC  270
V  94.1% (272/289)  IGHV1-69*06  186  ...G.........................................C........C...................G..C............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                 
                                        V  Y  Y  C  A  R  L  G  A  M  H  Y  S  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_898    271  CGTTTATTACTGTGCGAGACTGGGAGCCATGCACTACTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  355
V  94.1% (272/289)  IGHV1-69*06  276  ...G...............------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD1-26*01  8    --------------------.......----------------------------------------------------------  14
J  98.1% (52/53)    IGHJ6*02     10   --------------------------------......A..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_302577

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         358     4e-101
IGHD3-9*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAGGGGA	ACGATATTTTGGCTGG	GGTCCTGGACCCACC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATAAGGGGAACGATATTTTGGCTGGGGTCCTGGACCCACCCTACGACTACTACGGTATGGACGTC	ARDKGNDILAGVLDPPYDYYGMDV	244	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	240	11	0	95.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  N  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_899      1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAACAGTGGTAGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  95.6% (240/251)  IGHV4-30-4*01  49   ..................A.....................G.......GA........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  R  G  R  A  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_899      91   CTGGAGTGGATTGGGTACATCTATTACCGTGGGCGCGCCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCATTAGACACGTCC  180
V  95.6% (240/251)  IGHV4-30-4*01  139  ...........................A.....A..A.........................................G...........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------------
                                         K  N  Q  F  S  L  K  L  Y  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  K  G  N  D  I  L 
                    Query_899      181  AAGAACCAGTTCTCCCTGAAGCTGTACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGATAAGGGGAACGATATTTTG  270
V  95.6% (240/251)  IGHV4-30-4*01  229  ........................AG.........T...................................-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  93.8% (15/16)    IGHD3-9*01     6    -------------------------------------------------------------------------------...........  16

                                        -----CDR3-IMGT------------------------------>                                 
                                         A  G  V  L  D  P  P  Y  D  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_899      271  GCTGGGGTCCTGGACCCACCCTACGACTACTACGGTATGGACGTCTGGGGCCAGGGGACCACGGTCAGCGTCTCCTCA  348
D  93.8% (15/16)    IGHD3-9*01     17   A....-------------------------------------------------------------------------  21
J  94.8% (55/58)    IGHJ6*02       5    --------------------....T............................A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_302570

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           318     5e-89
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CT	ACTGGGGA	TTTGGAA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTACTGGGGATTTGGAATACTTTGACTCC	ATTGDLEYFDS	239	271	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	19	5	0	79.2
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	23	1	0	95.8
FR3-IMGT	125	238	114	108	6	0	94.7
CDR3-IMGT (germline)	239	242	4	4	0	0	100
Total	N/A	N/A	229	216	13	0	94.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  R  F  R  S  Y  T  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 
                    Query_900    14   TGTGCAGCCTCTGGATTCCGTTTCAGAAGCTATACCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATT  103
V  94.3% (216/229)  IGHV3-21*01  64   ..................ACC.....T.......G.....A.................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  M  K  G  R  F  S  I  T  R  D  N  A  K  N  S  L  Y  L 
                    Query_900    104  AGTAGTAGCAGTAGTTACATATACTACGCAGACTCAATGAAGGGCCGATTCTCCATCACCAGAGACAACGCCAAGAACTCACTCTATCTG  193
V  94.3% (216/229)  IGHV3-21*01  154  ........T...........................G..............A.....T.........................G......  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-----------CDR3-IMGT----------->            
                                       Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  T  T  G  D  L  E  Y  F  D  S  W  G  Q  G 
                    Query_900    194  CAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGACTACTGGGGATTTGGAATACTTTGACTCCTGGGGCCAGGGA  283
V  94.3% (216/229)  IGHV3-21*01  244  .......................G...........G.............-----------------------------------------  292
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  100.0% (8/8)     IGHD7-27*01  4    ---------------------------------------------------........-------------------------------  11
J  95.7% (44/46)    IGHJ4*02     3    ------------------------------------------------------------------..........A.............  26

                                                            
                                       T  L  V  A  V  S  S  
                    Query_900    284  ACCCTGGTCGCCGTCTCCTCAG  305
J  95.7% (44/46)    IGHJ4*02     27   .........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_13682

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGAATCGAGGCC	TACTATGAAAGTAGTGGTTTTTAC	N/A	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGAATCGAGGCCTACTATGAAAGTAGTGGTTTTTACGACTAC	AKDGIEAYYESSGFYDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_901    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGCTTCACCTTTAGCACCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  94.8% (237/250)  IGHV3-23*01  47   ...............................A.............G...........G.......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  F  
                    Query_901    91   AGTGGGTCTCAACTATTAGTGGGAGTGGTAGTAATACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTTCA  180
V  94.8% (237/250)  IGHV3-23*01  137  ...........G..........T......G...GC....................................................C..  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  G  D  T  A  L  Y  Y  C  A  K  D  G  I  E  A  Y  Y  
                    Query_901    181  AGAACACGCTGTATCTGCAGATGAACAGCCTGAGAGCCGGGGACACGGCCCTATATTACTGTGCGAAAGATGGAATCGAGGCCTACTATG  270
V  94.8% (237/250)  IGHV3-23*01  227  ...................A...................A..........G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  91.7% (22/24)    IGHD3-22*01  5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                      E  S  S  G  F  Y  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_901    271  AAAGTAGTGGTTTTTACGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  327
D  91.7% (22/24)    IGHD3-22*01  12   .T..........A....----------------------------------------  28
J  97.5% (39/40)    IGHJ4*02     9    -----------------..................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_302572

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           357     1e-100
IGHD7-27*01                                                                                           12.2    33    
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CATTGGTCGACTAGGGCGGAGACTCACCGGGGG	CTAACT	N/A	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATTGGTCGACTAGGGCGGAGACTCACCGGGGGCTAACTAACTGGTTCGACCCC	AKHWSTRAETHRGLTNWFDP	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_902    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-23*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  N  T  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_902    91   AGTGGGTCTCAACTATTAGTGGTAATACTGGTAGTACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (238/248)  IGHV3-23*01  137  ...........G............G.GG......C.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      M  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  F  Y  C  A  K  H  W  S  T  R  A  E  
                    Query_902    181  TGAACACACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTTTTACTGTGCGAAACATTGGTCGACTAGGGCGGAGA  270
V  96.0% (238/248)  IGHV3-23*01  227  A......G............................................A.A.............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      R3-IMGT------------------------>                                
                                      T  H  R  G  L  T  N  W  F  D  P  W  G  L  G  T  L  V  T  V  A  S
                    Query_902    271  CTCACCGGGGGCTAACTAACTGGTTCGACCCCTGGGGCCTGGGAACCCTGGTCACCGTCGCCTC  334
D  100.0% (6/6)     IGHD7-27*01  1    -----------......-----------------------------------------------  6
J  95.7% (45/47)    IGHJ5*02     3    -----------------......................A...................T....  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_302573

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*04                                                                                           380     1e-107
IGHD1-26*01                                                                                           23.8    0.013 
IGHJ4*01                                                                                              46.8    3e-09 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*04	IGHD1-26*01	IGHJ4*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGGGTCCT	TATAGTGGGAGC	CCGCAAGGGTACTTTGACTTCTGGGGCCAGGGGGAAGACCGAT	GAACC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	16	8	0	66.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  A  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  F
                    Query_903    1    GCAGCTGGTGCAGTCTGGAGGAGCCTTAGTGCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTT  90
V  92.0% (266/289)  IGHV3-23*04  6    ..........G.......G....G...G..A.......................................................G..A  95
                                        Q  L  V  E  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I  T  E  T  G  R  N  S  Y  Y  A  D
                    Query_903    91   CGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAACTATTACTGAGACTGGTCGTAATTCATACTACGCAGA  180
V  92.0% (266/289)  IGHV3-23*04  96   T........C..........................................G......G..GT.G....G...GCA.............  185
                                        A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  I  I  S  R  D  K  S  K  N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A
                    Query_903    181  CTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCAAGAACACACTGTATCTGCAAATGAACACCCTGAGAGCCGAGGACACGGC  270
V  92.0% (266/289)  IGHV3-23*04  186  ...............G....C...............T...........G...................G.....................  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------>                                                                             
                                        V  Y  Y  C  A  K  P  G  P  Y  S  G  S  P  Q  G  Y  F  D  F  W  G  Q  G  E  D  R  *  T  L
                    Query_903    271  CGTATATTACTGTGCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACTTCTGGGGCCAGGGGGAAGACCGATGAACCCT  360
V  92.0% (266/289)  IGHV3-23*04  276  ...................-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  K                                                                        
D  100.0% (12/12)   IGHD1-26*01  3    ----------------------------............--------------------------------------------------  14
J  100.0% (24/24)   IGHJ4*01     25   -----------------------------------------------------------------------------------.......  31

                                                       
                                        V  T  V  S  S  
                    Query_903    361  GGTCACCGTCTCCTCAG  377
J  100.0% (24/24)   IGHJ4*01     32   .................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_61065

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            369     2e-104
IGHD1-26*01                                                                                           14.1    9.2   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD1-26*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCG	GTGGGAG	TCCCCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATGCGGTGGGAGTCCCCCCCTACTTTGACTAC	KRCGGSPPLL*L	280	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	57	56	51	3	2	91.1
CDR1-IMGT	58	87	30	25	5	0	83.3
FR2-IMGT	88	138	51	50	1	0	98
CDR2-IMGT	139	165	27	26	1	0	96.3
FR3-IMGT	166	279	114	103	11	0	90.4
CDR3-IMGT (germline)	280	287	8	8	0	0	100
Total	N/A	N/A	286	263	21	2	92


Alignments

                                      <-----------------------FR1-IMGT-----------------------><----------CDR1-IMGT---------><---
                                         G  P    A  C  A  A  L  A  D  P  L  T  H  M  C  H  L  R  G  P  C  L  *  E  R  *  C  L  E
                    Query_904    4    CAGGTCCAG--CTTGTGCAGCCCTCGCAGACCCTCTCACTCACATGTGCCATCTCCGGGGACCTTGTCTCTAGGAACGGTGATGCTTGGA  91
V  92.0% (263/286)  IGHV6-1*01   20   .........GA..G...A.........................C..................AG.........C...A...C........  109
                                         G  P  G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  

                                      -----------------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------
                                        L  D  Q  A  V  P  I  E  R  P  *  V  A  G  K  D  I  L  Q  V  Q  V  V  *  *  L  C  S  I  S
                    Query_904    92   ATTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATATTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTC  181
V  92.0% (263/286)  IGHV6-1*01   110  .C..................................................C....................................G  199
                                      N  W  I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  

                                      -------------------------------------FR3-IMGT---------------------------------------------
                                        E  R  S  N  N  H  Q  P  R  H  F  Q  Q  P  L  L  P  A  P  E  L  C  D  S  R  G  H  G  Y  V
                    Query_904    182  TGAGAGGTCGAATAATCATCAGCCCAGACACTTCCAACAACCTCTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTATGT  271
V  92.0% (263/286)  IGHV6-1*01   200  ...A.A.........C.....A.........A.....G....AG...........G..............................G...  289
                                      V  K  S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  

                                      -------><--------------CDR3-IMGT-------------->                                  
                                        L  L  C  K  R  C  G  G  S  P  P  L  L  *  L  L  G  P  G  S  P  G  H  R  L  L   
                    Query_904    272  ATTACTGTGCAAGAGATGCGGTGGGAGTCCCCCCCTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  352
V  92.0% (263/286)  IGHV6-1*01   290  ................-----------------------------------------------------------------  305
                                      Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD1-26*01  7    --------------------.......------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ----------------------------------.........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_92896

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           316     2e-88
IGHD2-2*01                                                                                            14.1    8.7  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGCTCGTTGTGATAA	TACCATCTGC	CCGAAAAACTTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTCGTTGTGATAATACCATCTGCCCGAAAAACTTGCTGGTTCGACCCC	ARGLVVIIPSARKTCWFDP	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  D  I  S  I  N  T  G  D  Y  Y  W  S  W  F  R  Q  S  P  Q  K  G 
                    Query_905    1    ACCCTGTCCCTCACCTGCACTGTCTCTGATATCTCCATCAACACCGGTGATTACTATTGGAGCTGGTTCCGCCAGTCCCCACAGAAGGGC  90
V  90.7% (225/248)  IGHV4-31*03  49   ............................G.GG........G..GT....G......C.........A........CA....GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  F  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S 
                    Query_905    91   CTGGAATGGATTGGGTACATCTATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAGGAGTCGAGTTAGCATTTCCATAGACACGTCT  180
V  90.7% (225/248)  IGHV4-31*03  139  .....G..................................A.................A...........C...A..AG...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  V  V  I  I  P 
                    Query_905    181  AAGAACCAGTTCTCCCTGAAGGTGAACTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGGGGGCTCGTTGTGATAATACCA  270
V  90.7% (225/248)  IGHV4-31*03  229  .....................C...G...........................G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.0% (9/10)     IGHD2-2*01   16   -------------------------------------------------------------------------------------.....  20

                                      3-IMGT----------------------->                                  
                                       S  A  R  K  T  C  W  F  D  P  W  G  P  G  T  L  V  S  V  S  S  
                    Query_905    271  TCTGCCCGAAAAACTTGCTGGTTCGACCCCTGGGGCCCGGGAACCCTGGTCAGCGTCTCCTCAG  334
D  90.0% (9/10)     IGHD2-2*01   21   G....-----------------------------------------------------------  25
J  95.7% (45/47)    IGHJ5*02     5    -----------------....................A..............C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_61067

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           300     8e-84
IGHD1-7*01                                                                                            12.2    31   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-7*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	TCGGGGTGGGG	GGAACT	CGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGATCGGGGTGGGGGGAACTCGGGGACTACTTTGACTAC	ARSGWGELGDYFDY	237	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	24	0	0	100
FR2-IMGT	51	101	51	47	4	0	92.2
CDR2-IMGT	102	122	21	16	5	0	76.2
FR3-IMGT	123	236	114	106	8	0	93
CDR3-IMGT (germline)	237	242	6	5	1	0	83.3
Total	N/A	N/A	228	210	18	0	92.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  R  L  E  W  V  S  S  I 
                    Query_906    15   TGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGAGGCTGGAGTGGGTCTCAAGCATT  104
V  92.1% (210/228)  IGHV3-53*01  64   ..................................................................G.................GTT...  153
                                       C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I 

                                      ---CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-----------
                                       F  S  N  G  N  T  Y  Y  T  D  S  M  K  G  R  F  P  I  S  R  D  N  S  K  N  T  V  Y  L  Q 
                    Query_906    105  TTTAGTAATGGTAACACATACTACACAGACTCCATGAAGGGCCGATTCCCCATCTCCAGAGACAATTCCAAGAACACGGTGTATCTTCAG  194
V  92.1% (210/228)  IGHV3-53*01  154  .A...CGG.....G..........G........G..............A.............................C..........A  243
                                       Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 

                                      -----------------------------------------><----------------CDR3-IMGT--------------->      
                                       V  H  S  L  R  A  E  D  T  A  V  Y  *  C  A  R  S  G  W  G  E  L  G  D  Y  F  D  Y  W  G 
                    Query_906    195  GTGCACAGCCTGAGAGCCGAGGACACGGCCGTGTATTAGTGTGCAAGATCGGGGTGGGGGGAACTCGGGGACTACTTTGACTACTGGGGC  284
V  92.1% (210/228)  IGHV3-53*01  244  A..A..................................C.....G...------------------------------------------  291
                                       M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                           
D  100.0% (6/6)     IGHD1-7*01   10   -----------------------------------------------------------......-------------------------  15
J  95.8% (46/48)    IGHJ4*02     1    ----------------------------------------------------------------------....................  20

                                                                  
                                       Q  G  S  L  V  I  V  S  S  
                    Query_906    285  CAGGGATCCCTGGTCATCGTCTCCTCAG  312
J  95.8% (46/48)    IGHJ4*02     21   ......A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_61066

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD3-10*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGGAT	GGGAGTTA	CGAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATGGGAGTTACGAAACTTTGACTAC	ARGGWELRNFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_907    1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACAGCTTCACCAACTA  90
V  96.2% (278/289)  IGHV5-51*03  6    ....................C.............................................T..............T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  T  Y  S  P
                    Query_907    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCACATACAGCCC  180
V  96.2% (278/289)  IGHV5-51*03  96   ............................................................................A...G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  M  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_907    181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACATGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (278/289)  IGHV5-51*03  186  ........A..........................A........G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  F  C  A  R  G  G  W  E  L  R  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_907    271  CATCTATTTCTGTGCGAGAGGGGGATGGGAGTTACGAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.2% (278/289)  IGHV5-51*03  276  ...G....A..........----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD3-10*01  17   --------------------------........-------------------------------------------------  24
J  100.0% (45/45)   IGHJ4*02     4    --------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_61061

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           391     5e-111
IGHD2-2*01                                                                                            27.6    8e-04 
IGHJ6*02                                                                                              112     6e-29 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TT	TACCAGCTGCTATG	TC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTACCAGCTGCTATGTCCTACTACTACTACGGTATGGACGTC	ARDLPAAMSYYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	250	0	0	100


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                     Query_908    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  100.0% (250/250)  IGHV3-64*01  47   ..........................................................................................  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  
                     Query_908    91   AATATGTTTCAGCTATTAGTAGTAATGGGGGTAGCACATATTATGCAAACTCTGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  100.0% (250/250)  IGHV3-64*01  137  ..........................................................................................  226
                                       E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                       K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R  D  L  P  A  A  M  S  
                     Query_908    181  AGAACACGCTGTATCTTCAAATGGGCAGCCTGAGAGCTGAGGACATGGCTGTGTATTACTGTGCGAGAGATTTACCAGCTGCTATGTCCT  270
V  100.0% (250/250)  IGHV3-64*01  227  ......................................................................--------------------  296
                                       K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)    IGHD2-2*01   16   ------------------------------------------------------------------------..............----  29
J  100.0% (58/58)    IGHJ6*02     5    ----------------------------------------------------------------------------------------..  6

                                       GT-------------------->                                 
                                       Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                     Query_908    271  ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (58/58)    IGHJ6*02     7    ........................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_61060

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            338     4e-95
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATC	TAGTAACACCTG	GCACTCGGGGTTTTGGT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTAGTAACACCTGGCACTCGGGGTTTTGGTTAC	AGHLVTPGTRGFGY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  T  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_909   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCAGCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  93.9% (231/246)  IGHV4-4*01  49   ........................................G...T................................A........G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  G  G  N  T  N  Y  N  P  P  L  E  S  R  V  T  I  S  V  D  K  S  N 
                    Query_909   91   GAGTGGATTGGGGAAATCTATCATGGTGGAAACACCAACTACAACCCGCCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAC  180
V  93.9% (231/246)  IGHV4-4*01  139  ........................A....G.G................T.....A..................................G  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  R  L  N  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_909   181  AACCAGTTCTCCCTGAGGCTGAACTCTCTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATCTAGTAACACCTGGCACTCGG  270
V  93.9% (231/246)  IGHV4-4*01  229  ................A.....G....G...........................G.......A..------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01  13   ----------------------------------------------------------------------.....C..G...--------  24

                                     ----------->                                  
                                      G  F  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_909   271  GGTTTTGGTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (37/37)   IGHJ4*02    12   ---------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_61063

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           282     3e-78
IGHD3-10*01                                                                                           12.2    31   
IGHJ2*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGA	CGGGGA	TTGGAAG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGACGGGGATTGGAAGTTCGATCTC	ARHDGDWKFDL	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	98	16	0	86
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  D  S  I  I  S  S  R  F  F  W  G  W  L  R  Q  P  P  K  K  G  
                    Query_910    4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCATCAGTAGTCGTTTCTTCTGGGGCTGGCTCCGCCAGCCCCCAAAGAAGGGGC  93
V  86.0% (215/250)  IGHV4-39*01  50   .....TCC...A..................G........G.......A...A..A..........A..............GG........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  T  I  H  D  S  G  N  R  W  S  N  P  T  L  K  S  R  L  T  I  S  V  D  T  S  
                    Query_910    94   TGGAGTGGATTGGGACTATCCATGACAGTGGGAACAGATGGTCCAACCCGACCCTCAAGAGTCGACTCACCATATCGGTGGACACGTCCA  183
V  86.0% (215/250)  IGHV4-39*01  140  ...............G....T..T.T.......G..CC.AC.A.......T..............G..........C..A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      M  N  Q  F  S  L  T  I  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  H  D  G  D  W  K  F  
                    Query_910    184  TGAACCAGTTCTCCCTGACGATTTCCTCTATGACCGCCGCTGACACGGCTGTCTATTACTGTGCGAGACATGACGGGGATTGGAAGTTCG  273
V  86.0% (215/250)  IGHV4-39*01  230  A.................A.C.GAG....G..........A...........G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01  15   -------------------------------------------------------------------------......-----------  20
J  95.3% (41/43)    IGHJ2*01     11   --------------------------------------------------------------------------------------....  14

                                      ---->                                  
                                      D  L  W  G  R  G  S  Q  V  T  V  S  S  
                    Query_910    274  ATCTCTGGGGCCGTGGCTCCCAGGTCACTGTCTCCTCAG  312
J  95.3% (41/43)    IGHJ2*01     15   .................A...T.................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_232368

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           339     2e-95
IGHD1-1*01                                                                                            10.3    123  
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGGGAAACGTAGGGATGCC	TACAA	TCGTC	GATGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGAAACGTAGGGATGCCTACAATCGTCGATGTTTTTGATGTC	ARMGNVGMPTIVDVFDV	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_911    1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  93.6% (233/249)  IGHV4-31*03  49   ...................C.....................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Q  I  Y  H  T  G  S  S  D  Y  S  P  S  L  K  S  R  L  T  I  A  V  D  T  S 
                    Query_911    91   CTGGAGTGGATCGGGCAAATCTATCACACTGGGAGCAGCGACTACAGCCCGTCCCTCAAGAGTCGACTTACCATAGCTGTAGACACGTCT  180
V  93.6% (233/249)  IGHV4-31*03  139  ...........T...T.C......T...G........C.T......A...................G........T.A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  M  G  N  V  G  M  P 
                    Query_911    181  AAGAACCAGTTCTCCCTGAACCTGAGTTCTGTGACGGCCGCGGACACGGCCGTGTATTACTGTGCGAGAATGGGAAACGTAGGGATGCCT  270
V  93.6% (233/249)  IGHV4-31*03  229  ....................G.....C........T.................................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD1-1*01   3    -----------------------------------------------------------------------------------------.  3

                                      MGT-------------------->                                  
                                       T  I  V  D  V  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_911    271  ACAATCGTCGATGTTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  328
D  100.0% (5/5)     IGHD1-1*01   4    ....------------------------------------------------------  7
J  98.0% (48/49)    IGHJ3*01     2    ---------....C............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_209805

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           355     3e-100
IGHD1-26*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTCCGGAG	GTGGGAGCTACT	CGTGGTCCTTTTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCGGAGGTGGGAGCTACTCGTGGTCCTTTTCCTAC	ARGSGGGSYSWSFSY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_912    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGCTTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-21*01  47   .............................................G.......A...A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  S  S  S  S  Y  M  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_912    91   AGTGGGTCTCATCCATTACTAGTAGTAGTAGTTACATGAACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (238/249)  IGHV3-21*01  137  ..................G..................AT...................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  S  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  G  S  G  G  G  S  Y  
                    Query_912    181  AGAGCTCCCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTTCTGTGCGAGAGGGTCCGGAGGTGGGAGCTACT  270
V  95.6% (238/249)  IGHV3-21*01  227  ...A...A....A.......................................G....A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD1-26*01  7    ------------------------------------------------------------------------------............  18

                                      ---------------->                                  
                                      S  W  S  F  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_912    271  CGTGGTCCTTTTCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (38/38)   IGHJ4*02     11   -------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_72209

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           367     6e-104
IGHD2-8*01                                                                                            23.8    0.012 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GGGGC	TATTGTAATGATGGTATGTGCTACACC	CCCGT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGGGGCTATTGTAATGATGGTATGTGCTACACCCCCGTCTACTACTACTCCGGTATGGACGTC	AKGGYCNDGMCYTPVYYYSGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  P  
                    Query_913    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTACTGGATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  97.2% (242/249)  IGHV3-74*01  47   .............................................G........................A................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_913    91   TGTGGGTCTCACGTATCAATAGTGATGGGAGTAGCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (242/249)  IGHV3-74*01  137  ................T......................G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  G  Y  C  N  D  G  
                    Query_913    181  AGAACACCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAAAGGGGGCTATTGTAATGATGGTA  270
V  97.2% (242/249)  IGHV3-74*01  227  .......G..........................................................G..---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  81.5% (22/27)    IGHD2-8*01   5    --------------------------------------------------------------------------.......C.A.....G  20

                                      --CDR3-IMGT----------------------------->                                 
                                      M  C  Y  T  P  V  Y  Y  Y  S  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_913    271  TGTGCTACACCCCCGTCTACTACTACTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  344
D  81.5% (22/27)    IGHD2-8*01   21   .A.....T...---------------------------------------------------------------  31
J  96.6% (56/58)    IGHJ6*02     5    ----------------...........A...................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_347197

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           350     8e-99
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCATC	ATTACTATGCTAACAGTGATTATT	TCGTAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCATCATTACTATGCTAACAGTGATTATTTCGTAGAC	ARGHHYYANSDYFVD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  V  R  Q  H  P  G  K  G 
                    Query_914    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*03  49   .............................TGG.......A..........................A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  S  A  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_914    91   CTGGAGTGGATTGGCTGCATCTATTACAGTGGGAGCGCCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCGGTCGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*03  139  ..............G.A...................A........................................A..A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  G  H  H  Y  Y  A  N 
                    Query_914    181  AAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACTCGGCCGTGTATTACTGTGCGAGAGGGCATCATTACTATGCTAAC  270
V  94.8% (237/250)  IGHV4-31*03  229  .....................C...G...................A........................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  83.3% (20/24)    IGHD3-22*01  3    ----------------------------------------------------------------------------.........A..GT  16

                                      ----------------->                                  
                                       S  D  Y  F  V  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_914    271  AGTGATTATTTCGTAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  83.3% (20/24)    IGHD3-22*01  17   ....G.....------------------------------------------  26
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_347196

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           361     4e-102
IGHD3-10*01                                                                                           10.3    117   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACGAGCGGTC	TCGGG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACGAGCGGTCTCGGGATTGACTAC	ARDTSGLGIDY	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	241	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_915    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTTCTTACTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (241/251)  IGHV4-31*03  49   ................................................GG...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  R  S  G  S  T  Y  Y  N  P  S  L  K  S  R  I  T  I  S  I  D  T  S 
                    Query_915    91   CTGGAGTGGATTGGGTACATCTATCGCAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAATTACCATATCAATAGACACGTCT  180
V  96.0% (241/251)  IGHV4-31*03  139  ........................TA........................................G...........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  P  A  V  Y  Y  C  A  R  D  T  S  G  L  G  I 
                    Query_915    181  AAGAACCAGTTCTCCCTGAAGCTAAGCTCTGTGACTGCCGCGGACCCGGCCGTATATTACTGTGCGAGAGATACGAGCGGTCTCGGGATT  270
V  96.0% (241/251)  IGHV4-31*03  229  .......................G.....................A.......G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  14   ----------------------------------------------------------------------------------.....---  18
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_915    271  GACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  310
J  97.6% (41/42)    IGHJ4*02     9    ...........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_332274

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           307     1e-85
IGHD4-17*01                                                                                           14.1    8.5  
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGAATAC	AG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGAATACAGCAACTGGGTCGACCCC	ARDSGEYSNWVDP	252	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	137	27	19	2	6	70.4
FR3-IMGT	138	251	114	105	9	0	92.1
CDR3-IMGT (germline)	252	259	8	8	0	0	100
Total	N/A	N/A	256	228	22	6	89.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  D  S  V  S  S  G  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  
                    Query_916    4    CCCTGAGACTCTCCTGCAGTGTCTCTGGTGACTCCGTCAGCAGTGGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGGC  93
V  89.1% (228/256)  IGHV4-61*01  50   .....TCC...A......C...........G.............................G...........................A.  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><--------CDR2-IMGT--------><---------------------------------------------
                                      L  E  W  I  G  H  I  Y  N  Y  N  R  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  
                    Query_916    94   TGGAGTGGATCGGTCATATCTATAACTATAACAGAGGGAGCACCAATTATAATCCCTCCCTCCAAAGTCGAGTCACCATATCAGTAGACA  183
V  89.1% (228/256)  IGHV4-61*01  140  ..........T..GT........T..------..T...........C..C..C.........A.G.........................  223
                                      L  E  W  I  G  Y  I  Y  Y        S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  G  E  Y  
                    Query_916    184  CATCCAAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATTCCGGTGAATACA  273
V  89.1% (228/256)  IGHV4-61*01  224  .G........................C...G...........................G.................--------------  299
                                      T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                 
D  90.0% (9/10)     IGHD4-17*01  7    -------------------------------------------------------------------------------......C...-  16

                                      GT-------------->                                  
                                      S  N  W  V  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_916    274  GCAACTGGGTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  98.0% (49/50)    IGHJ5*02     2    -.......T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_332275

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           336     1e-94
IGHD1-26*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GGG	GGGAGCTACT	CTCCTTTT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGGGGGGAGCTACTCTCCTTTTTGCTTTTGATATC	VKGGATLLFAFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  M  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_917    1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAATATGTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTAG  90
V  93.5% (231/247)  IGHV3-64*05  47   ..........................................G..GC.........................................G.  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  V  S  S  I  T  S  N  A  E  S  T  Y  Y  T  D  S  V  K  D  R  F  T  I  S  R  D  N  S  
                    Query_917    91   AATCTGTCTCCTCTATTACTAGTAATGCGGAGAGCACATACTACACAGACTCAGTGAAGGACAGATTCACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-64*05  137  ...A...T..AG......G........G..GT............G...............G.............................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  G  G  A  T  L  L  F  
                    Query_917    181  AGAACACGCTGTATCTTCAAATGAGCAGTCTGAGACCTGAGGACACGGCTGTGTATTACTGTGTGAAGGGGGGAGCTACTCTCCTTTTTG  270
V  93.5% (231/247)  IGHV3-64*05  227  ..............G....................G...............................-----------------------  293
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V                          
D  100.0% (10/10)   IGHD1-26*01  9    ----------------------------------------------------------------------..........----------  18
J  97.9% (46/47)    IGHJ3*02     4    ----------------------------------------------------------------------------------------..  5

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_917    271  CTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  315
J  97.9% (46/47)    IGHJ3*02     6    ..........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_332276

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           324     8e-91
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GAATGAACACTGC	CTGGTAC	TTGCTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGAACACTGCCTGGTACTTGCTTTACTTTGAAGAC	ARMNTAWYLLYFED	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	29	28	28	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  E  Y  A  M  G  W  V  R  R  A  P  G  K  G  L  E
                    Query_918    2    GTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTGAATATGCCATGGGCTGGGTCCGCCGGGCTCCAGGGAAGGGGCTGGA  91
V  92.2% (226/245)  IGHV3-23*01  48   ..........................................CAGC.........A............A.....................  137
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E

                                      ------------><-------CDR2-IMGT------><----------------------------------------------------
                                        W  V  S  S  L  S  G  T  G  G  S  T  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  S  K
                    Query_918    92   GTGGGTCTCAAGTCTTAGTGGGACTGGTGGTAGCACATACTACCCAGACTCCGTGAAGGGCCGGTTCACCGTGTCCAGAGACAATTCCAA  181
V  92.2% (226/245)  IGHV3-23*01  138  ..........GC.A.......T.G...................G..........................A.C.................  227
                                        W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K

                                      FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT---
                                        N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  M  N  T  A  W  Y  L  L
                    Query_918    182  GAACACTCTGTATCTACAAATGAGCAGCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGAATGAACACTGCCTGGTACTTGCT  271
V  92.2% (226/245)  IGHV3-23*01  228  ......G........G.......A...........................A.....C.......-------------------------  292
                                        N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                           
D  100.0% (7/7)     IGHD6-13*01  15   ------------------------------------------------------------------------------.......-----  21

                                      ------------>                                  
                                        Y  F  E  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_918    272  TTACTTTGAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  95.7% (44/46)    IGHJ4*02     3    -........CT....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_332277

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           377     1e-106
IGHD3-16*01                                                                                           12.2    36    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACTTCTCCCCGGGTCCCCC	TGGGGG	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACTTCTCCCCGGGTCCCCCTGGGGGCCCTTTGACTCT	ARTLLPGSPWGPFDS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	265	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  A  V  R  R  P  G  E  S  L  T  I  S  C  Q  G  S  G  Y  R  V  P  T  H
                    Query_919    1    GCAGCTGGTGCAGTCTGGAGCAGCGGTGAGAAGGCCCGGGGAGTCTCTGACGATTTCCTGTCAGGGTTCTGGATACAGAGTTCCCACCCA  90
V  91.7% (265/289)  IGHV5-51*01  6    .......................A.....A..A.................A...C......A................CT..A...G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_919    91   TTGGATCGGGTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  91.7% (265/289)  IGHV5-51*01  96   C........C......................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  V  N  T  A  Y  L  Q  W  S  S  L  K  A  P  D  P  A
                    Query_919    181  GTCCTTCCAAGGCCAGGTCACCATCTCTGTCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCCCGGACCCCGC  270
V  91.7% (265/289)  IGHV5-51*01  186  ...........................A.C..........A...G........................C.........T.....A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        T  Y  F  C  A  R  T  L  L  P  G  S  P  W  G  P  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_919    271  CACATATTTCTGTGCGAGAACACTTCTCCCCGGGTCCCCCTGGGGGCCCTTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  91.7% (265/289)  IGHV5-51*01  276  ..TG....A..........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------......--------------------------------------------  22
J  95.5% (42/44)    IGHJ4*02     5    ------------------------------------------------........AC................................  46

                                        
                                        
                    Query_919    361  AG  362
J  95.5% (42/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_214289

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD2-2*01                                                                                            14.1    9.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTCAATTTGGTTCCGCAAATGG	GTACCAG	N/A	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTCAATTTGGTTCCGCAAATGGGTACCAGTACGGCATGGACGTC	ARFQFGSANGYQYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_920    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  98.3% (284/289)  IGHV5-51*03  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_920    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATTGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ................................................G.........................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  R  A  S  D  S  T
                    Query_920    181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACAGCAC  270
V  98.3% (284/289)  IGHV5-51*03  186  ............................................G.............................A...........C.G.  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  F  Q  F  G  S  A  N  G  Y  Q  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_920    271  CATGTATTACTGTGCGAGATTTCAATTTGGTTCCGCAAATGGGTACCAGTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  98.3% (284/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-2*01   15   ------------------------------------------.......-----------------------------------------  21
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------------.....T...................................  55

                                             
                                        S  S 
                    Query_920    361  CTCCTCA  367
J  97.9% (47/48)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_319143

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           330     1e-92
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCCCCCTCCTGTG	GGTGACTAC	GTCAGCGGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCCCCCTCCTGTGGGTGACTACGTCAGCGGCCTTGACTAT	AKPPPVGDYVSGLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	229	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  S  T  S  G  M  H  W  V  R  Q  A  P  G  E  G  L  
                    Query_921    1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCATGTTCAGCACCTCTGGCATGCACTGGGTCCGCCAGGCTCCAGGCGAGGGGCTGG  90
V  92.7% (229/247)  IGHV3-30*18  47   ......................A.............CC.....T.G..A...............................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_921    91   AGTGGGTGGCAGTCATTTCATATGATGGAAGTAATACGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGGGACAATTCCA  180
V  92.7% (229/247)  IGHV3-30*18  137  .............T..A...................AA.........................................A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  S  L  Q  M  S  S  L  R  P  E  D  S  G  V  Y  Y  C  A  K  P  P  P  V  G  D  Y  
                    Query_921    181  AGAACACCCTGTCTCTGCAAATGAGCAGCCTGAGACCTGAGGACTCGGGTGTGTATTACTGTGCGAAGCCCCCTCCTGTGGGTGACTACG  270
V  92.7% (229/247)  IGHV3-30*18  227  .......G....A...........A..........G........A...C..................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD4-17*01  8    --------------------------------------------------------------------------------.........-  16

                                      ---------------->                                  
                                      V  S  G  L  D  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_921    271  TCAGCGGCCTTGACTATTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  321
J  95.2% (40/42)    IGHJ4*02     7    ---------.......C................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_332272

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           408     4e-116
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_922    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.2% (275/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  F  N  T  R  Y  S  P
                    Query_922    91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTTTAATACCCGATACAGCCC  180
V  95.2% (275/289)  IGHV5-51*03  96   ........G.......................A...................................A..C.G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_922    181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCTTGCAGGCCGCGGACACCGC  270
V  95.2% (275/289)  IGHV5-51*03  186  .............................................C...........G............C..A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_922    271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.2% (275/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_922    361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_319142

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           305     3e-85
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	239	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	11	1	0	91.7
CDR1-IMGT	26	49	24	18	6	0	75
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	17	7	0	70.8
FR3-IMGT	125	238	114	109	5	0	95.6
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	233	214	19	0	91.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 
                    Query_923    14   TGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATT  103
V  91.8% (214/233)  IGHV3-21*01  64   ...........TG.....AC........G.T....C......................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_923    104  AGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAATTCACTGTATCTG  193
V  91.8% (214/233)  IGHV3-21*01  154  ...A.T...A.TAG.....T..A......................................................C............  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------------------CDR3-IMGT----------
                                       Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  W  V  A  G  T  G 
                    Query_923    194  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGA  283
V  91.8% (214/233)  IGHV3-21*01  244  .................................G.G.....C...........-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (11/11)   IGHD6-19*01  11   ---------------------------------------------------------------------------...........----  21

                                      -------------->                                  
                                       H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_923    284  CACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  332
J  97.7% (42/43)    IGHJ4*02     6    ------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_332278

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           324     8e-91
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAG	GTCGAGGGAG	TGACTACGGT	AGACT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGGTCGAGGGAGTGACTACGGTAGACTCTACTTTGACTAC	AKGRGSDYGRLYFDY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	101	51	44	4	3	86.3
CDR2-IMGT	102	125	24	19	5	0	79.2
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	249	230	16	3	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  I  S  W  V  R  R  A  P  G  K  G  L  
                    Query_924    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATGCCATCAGCTGGGTCCGCCGGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-23*01  47   ...........................................C.G.........G.............A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S     M  I  G  G  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_924    91   AATGGATCTCA---ATGATTGGTGGTGGTGGAACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  177
V  92.4% (230/249)  IGHV3-23*01  137  .G...G.....GCT..T.G....A.......T.G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  G  R  G  S  D  Y  G  
                    Query_924    178  AGAACACCCTGTATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCATATACTACTGTGCCAAAGGTCGAGGGAGTGACTACGGTA  267
V  92.4% (230/249)  IGHV3-23*01  227  .......G...............A..........................G....T........G....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD4-17*01  1    -------------------------------------------------------------------------------..........-  10

                                      ---------------->                                  
                                      R  L  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_924    268  GACTCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (47/47)   IGHJ4*02     2    ----...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_332279

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           336     1e-94
IGHD3-3*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGACATCCTT	TTACGATTT	N/A	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGACATCCTTTTACGATTTCTTCGACTTC	ARLTSFYDFFDF	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  V  S  S  G  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G 
                    Query_925    1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCGTCAGCAGTGGCAGTTACTACTGGAACTGGATCCGGCAGCCCCCCGGGAAGGGA  90
V  93.2% (232/249)  IGHV4-61*01  49   ..................A............................T.............G..................A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  R  T  N  N  N  P  S  L  K  N  R  V  T  I  S  V  D  T  S 
                    Query_925    91   CTGGAGTGGATTGGGAATATCTATTACAGTGGGCGCACCAATAACAACCCGTCCCTCAAGAATCGAGTCACCATATCAGTAGACACGTCC  180
V  93.2% (232/249)  IGHV4-61*01  139  ...............T.................A.......CT.......C..........G............................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  H  Q  F  S  L  K  L  N  S  V  T  A  S  D  T  A  I  Y  Y  C  A  R  L  T  S  F  Y  D  F 
                    Query_925    181  AAGCACCAGTTCTCCCTGAAGCTGAATTCTGTGACCGCGTCGGACACGGCCATTTATTACTGTGCGAGACTGACATCCTTTTACGATTTC  270
V  93.2% (232/249)  IGHV4-61*01  229  ...A.....................GC...........TG...........G.G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-3*01   4    --------------------------------------------------------------------------------.........-  12
J  86.4% (38/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  F  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_925    271  TTCGACTTCTGGGGCCAGGGAATTTTAGTCACCGTCTCCTCAG  313
J  86.4% (38/44)    IGHJ4*02     6    ..T....A..............CCC.G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_143379

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           23.8    0.011
IGHJ2*01                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAT	TATTTCCATGATAGTCGTGGT	G	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCATTATTTCCATGATAGTCGTGGTGACTGGTACCTCGATCTC	ARDHYFHDSRGDWYLDL	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  H  D  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_926    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTCACGACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-53*01  47   ............................................AG.A..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  H  R  D  G  K  T  D  Y  A  V  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_926    91   AGTGGGTCTCAGTTATTCATAGGGATGGAAAAACAGACTATGCAGTCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.9% (232/247)  IGHV3-53*01  137  .................T....C.G...T.GC...T....C....A............................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------------CDR3-IMGT-
                                      N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  H  Y  F  H  D  S  R  
                    Query_926    181  ACACTGTGTATCTTCAAATGAACAGCCTGCGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGACCATTATTTCCATGATAGTCGTG  270
V  93.9% (232/247)  IGHV3-53*01  227  ....GC.......................A.....................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  85.7% (18/21)    IGHD3-22*01  2    -----------------------------------------------------------------------....A.T........A...  20

                                      ------------------->                                  
                                      G  D  W  Y  L  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_926    271  GTGACTGGTACCTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  85.7% (18/21)    IGHD3-22*01  21   ..----------------------------------------------------  22
J  98.0% (50/51)    IGHJ2*01     3    ---........T..........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_143378

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           283     1e-78
IGHD6-6*01                                                                                            14.1    8.3  
IGHJ3*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-6*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCC	AGTATCGAAGATCGTC	GGCTGGTTTCTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCAGTATCGAAGATCGTCGGCTGGTTTCTCTTGATATC	ARPSIEDRRLVSLDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	212	31	0	87.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  R  G  Y  Y  W  S  W  L  P  Q  S  P  G  K  G  L  Q 
                    Query_927    1    ACCCTGTCCCTCACCTGCGCTGTTTATGGCGGATCATTCAGGGGCTACTACTGGAGTTGGCTCCCCCAGTCCCCAGGGAAGGGGCTGCAG  90
V  87.2% (212/243)  IGHV4-34*01  49   .......................C.....T..G..C.....T..T...........C...A...G....C.................G..  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       G  I  G  E  I  N  H  R  G  I  T  N  Y  I  P  S  L  K  S  R  L  T  M  S  V  D  T  S  K  N 
                    Query_927    91   GGGATTGGAGAAATCAATCACAGAGGGATCACCAATTACATCCCGTCCCTCAAGAGTCGACTCACCATGTCGGTAGACACCTCCAAGAAT  180
V  87.2% (212/243)  IGHV4-34*01  139  T.......G...........T..T..A.G......C....A...................G.......A..A........G........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  P  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  S  I  E  D  R  R  L  V 
                    Query_927    181  CAATTCCCCCTGAACCTTAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGACCCAGTATCGAAGATCGTCGGCTGGTT  270
V  87.2% (212/243)  IGHV4-34*01  229  ..G...T.......G..G..C.......................T..G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  81.2% (13/16)    IGHD6-6*01   2    ------------------------------------------------------------------.....A.C..C.....--------  17

                                      ----------->                                  
                                       S  L  D  I  W  G  Q  G  T  M  V  V  V  S  S  
                    Query_927    271  TCTCTTGATATCTGGGGCCAAGGGACAATGGTCGTTGTCTCTTCAG  316
J  92.9% (39/42)    IGHJ3*02     9    ----.............................ACC..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_272203

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTA	ACGATTT	ACATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACGATTTACATTATGGTATGGACGTC	RELTIYIMVWTS	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	26	27	25	1	1	92.6
CDR1-IMGT	27	56	30	30	0	0	100
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	250	244	5	1	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L   P  A  V  S  L  V  A  P  S  A  V  V  V  T  T  G  A  G  F  A  S  T  Q  G  R  A
                    Query_928    1    ACCCTGTCCCT-ACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATTCGCCAGCACCCAGGGAAGGGC  89
V  97.6% (244/250)  IGHV4-31*03  49   ...........C.......C................................................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                        W  S  G  L  G  T  C  I  T  V  G  A  P  T  T  T  R  P  S  R  V  E  L  P  Y  Q  *  T  R  L
                    Query_928    90   CTGGAGTGGGTTGGGTACATGTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  179
V  97.6% (244/250)  IGHV4-31*03  139  .........A..........C.....................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                        R  T  S  S  P  *  S  *  A  L  *  L  P  R  T  R  P  C  I  T  V  R  E  L  T  I  Y  I  M  V
                    Query_928    180  AAGAACCAGCTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTTAACGATTTACATTATGGT  269
V  97.6% (244/250)  IGHV4-31*03  229  .........T............................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   6    -------------------------------------------------------------------------.......----------  12
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                        W  T  S  G  A  K  G  P  R  S  P  S  P   
                    Query_928    270  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  311
J  100.0% (45/45)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_272200

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     3e-93
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_929    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  T  
                    Query_929    91   AGTGGGTCTCAGCGATTACTGGGAGTGGTAGTAGTACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTACACCA  180
V  92.4% (231/250)  IGHV3-23*01  137  .............T....G...T......G....C.........G......................................A.TT...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  L  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_929    181  AGAACACGCTGTATCTGCTAATGAACAGCCTTACAGCCGAGGACACGGCCGTCTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  92.4% (231/250)  IGHV3-23*01  227  ..................A............G.G..................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_929    271  ATTCACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_143373

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           316     2e-88
IGHD6-13*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CTTC	TATAACAGCAGTTGG	GTACTCGA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTTCTATAACAGCAGTTGGGTACTCGATGACTTC	ARDFYNSSWVLDDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  R  I  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_930    1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTCAGAATCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.4% (226/250)  IGHV3-21*01  47   ........................C..................T.G.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  G  S  T  H  V  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_930    91   AGTGGGTCTCATCGATTAGTAGTGGTTCAACTCATGTATATTATGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAATGCCA  180
V  90.4% (226/250)  IGHV3-21*01  137  .............C.........A..AGT.G.T.CA....C..C........A..................A.............C....  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  Q  S  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  F  Y  N  S  S  W  
                    Query_930    181  AGCAATCACTGTATCTGCAAATGCACAGCCTGAGAGCCGACGACACGGCTGTATACTACTGTGCGAGAGACTTCTATAACAGCAGTTGGG  270
V  90.4% (226/250)  IGHV3-21*01  227  ..A.C..................A................G...........G..T..............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD6-13*01  4    --------------------------------------------------------------------------....G......C...-  18

                                      ------------->                                
                                      V  L  D  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_930    271  TACTCGATGACTTCTGGGGCCAGGGGACCCTGGTCACCGTCTCCTC  316
J  94.9% (37/39)    IGHJ4*02     8    -------.....A............A....................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_143372

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            357     1e-100
IGHD1-1*01                                                                                            14.1    8.1   
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACTAAAACAAGAC	CTGGGACGAC	G	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACTAAAACAAGACCTGGGACGACG	ARDTKTRPGTT	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	111	3	0	97.4
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  I  Y  Y  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_931   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTATTTACTACTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  96.0% (238/248)  IGHV4-4*02  49   ..............................................G.A...GG....G...............................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  S  G  T  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_931   91   GAGTGGATTGGGGAAATCTATCATAGTGGGACCGCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACAAGTCCAAG  180
V  96.0% (238/248)  IGHV4-4*02  139  ...............................G.A.....................................A..................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                      N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  K  T  R  P  G  T 
                    Query_931   181  AACCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATACTAAAACAAGACCTGGGACG  270
V  96.0% (238/248)  IGHV4-4*02  229  .................G....G.............................................----------------------  296
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  90.0% (9/10)     IGHD1-1*01  8    ----------------------------------------------------------------------------------....A...  15

                                     -->                                  
                                      T  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_931   271  ACGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
D  90.0% (9/10)     IGHD1-1*01  16   ..-----------------------------------  17
J  100.0% (34/34)   IGHJ4*02    15   ---..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_143371

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           413     2e-117
IGHD1-1*01                                                                                            10.3    134   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAACG	GGTAACCCCATATCGCGGC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTAT	ARGTGNPISRLGY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_932    1    GCAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTA  90
V  95.5% (277/290)  IGHV1-46*01  6    ..................G.C.....................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  A  G  S  T  N  Y  A  Q
                    Query_932    91   CTATGTGCACTGGGTACGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGCTGGTAGCACAAATTACGCACA  180
V  95.5% (277/290)  IGHV1-46*01  96   ....A..........G....................................................G...........GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  L  D  L  S  S  L  K  S  D  D  T  A
                    Query_932    181  GAAATTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACTTGGACCTGAGCAGCCTTAAATCTGACGACACGGC  270
V  95.5% (277/290)  IGHV1-46*01  186  ...G...................................................A....G...........G.G......G........  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  G  T  G  N  P  I  S  R  L  G  Y  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_932    271  CGTGTATTACTGTGCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  356
V  95.5% (277/290)  IGHV1-46*01  276  ....................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (5/5)     IGHD1-1*01   11   --------------------.....-------------------------------------------------------------  15
J  92.9% (39/42)    IGHJ4*02     7    --------------------------------------------...A...C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_143370

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           304     9e-85
IGHD2-21*02                                                                                           14.1    8.4  
IGHJ1*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*02	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TCTGAGTA	GTGACTG	GATCC	CTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATCTGAGTAGTGACTGGATCCCTGAATACTTCCATCAG	AKDLSSDWIPEYFHQ	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	125	24	17	4	3	70.8
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	250	224	23	3	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  F  A  M  T  W  L  R  Q  A  P  G  K  G  P  
                    Query_933    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAACTTTGCCATGACGTGGCTCCGTCAGGCTCCAGGGAAGGGGCCGG  90
V  89.6% (224/250)  IGHV3-23*01  47   ...........................................C.G..A........GC...G....C...................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  A  T  G  G     T  Y  Y  R  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_933    91   AGTGGGTCTCAAGTGTCAGTGCTACTGGTGG---CACATATTACAGAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  177
V  89.6% (224/250)  IGHV3-23*01  137  ...........GC.A.T....G..G......TAG......C...GC............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  S  M  M  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  L  S  S  D  W  I  
                    Query_933    178  AGAGCATGATGTTTTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGGATCTGAGTAGTGACTGGATCC  267
V  89.6% (224/250)  IGHV3-23*01  227  ...A..C.C...A.C....................................................A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD2-21*02  15   ------------------------------------------------------------------------------.......-----  21

                                      ---------------->                                  
                                      P  E  Y  F  H  Q  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_933    268  CTGAATACTTCCATCAGTGGGGCCAGGGCACCCTGGTCATCGTCTCCTCAG  318
J  94.1% (48/51)    IGHJ1*01     2    .............G..C......................C...........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_143376

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     3e-93
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGGGTCCT	TATAGTGGGAGC	CCGCAAGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACTTC	AKPGPYSGSPQGYFDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_934    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTTCGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (230/248)  IGHV3-23*01  47   .............................................G..AT........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  T  E  T  G  R  N  S  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  
                    Query_934    91   AGTGGGTCTCAACTATTACTGAGACTGGTCGTAATTCATACTACGCAGACTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCA  180
V  92.7% (230/248)  IGHV3-23*01  137  ...........G......G..GT.G....G...GCA............................G....C...............T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  G  P  Y  S  G  S  
                    Query_934    181  AGAACACACTGTATCTGCAAATGAACACCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAACCGGGTCCTTATAGTGGGAGCC  270
V  92.7% (230/248)  IGHV3-23*01  227  .......G...................G........................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD1-26*01  3    -----------------------------------------------------------------------------............-  14

                                      T------------------>                                  
                                      P  Q  G  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_934    271  CGCAAGGGTACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.8% (45/46)    IGHJ4*02     3    --------..........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_272208

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           394     7e-112
IGHD3-22*01                                                                                           23.8    0.012 
IGHJ2*01                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAT	TATTTCCATGATAGTCGTGGT	G	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCATTATTTCCATGATAGTCGTGGTGACTGGTACTTCGATCTC	ARDHYFHDSRGDWYFDL	281	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	166	21	15	6	0	71.4
FR3-IMGT	167	280	114	107	7	0	93.9
CDR3-IMGT (germline)	281	288	8	8	0	0	100
Total	N/A	N/A	288	270	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  R  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  H  D
                    Query_935    1    GCAGCTGGTGCAGTCTGGAGGACGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTCACGA  90
V  93.8% (270/288)  IGHV3-53*01  6    ..........G...........G..............................................................AG.A.  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  H  R  D  G  K  T  D  Y  A  V  S
                    Query_935    91   CTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTCATAGGGATGGAAAAACAGACTATGCAGTCTC  180
V  93.8% (270/288)  IGHV3-53*01  96   ..........................................................T....C.G...T.GC...T....C....A...  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V
                    Query_935    181  CGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCAAGAACACTGTGTATCTTCAAATGAACAGCCTGCGAGCCGAGGACACGGCCGT  270
V  93.8% (270/288)  IGHV3-53*01  186  .................................T...........GC.......................A...................  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><--------------------CDR3-IMGT-------------------->                             
                                        Y  Y  C  A  R  D  H  Y  F  H  D  S  R  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S
                    Query_935    271  GTATTACTGTGCGAGAGACCATTATTTCCATGATAGTCGTGGTGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTC  360
V  93.8% (270/288)  IGHV3-53*01  276  ..................------------------------------------------------------------------------  293
                                        Y  Y  C  A  R                                                                           
D  85.7% (18/21)    IGHD3-22*01  2    ----------------------....A.T........A.....-----------------------------------------------  22
J  100.0% (51/51)   IGHJ2*01     3    --------------------------------------------..............................................  48

                                           
                                        S  
                    Query_935    361  CTCAG  365
J  100.0% (51/51)   IGHJ2*01     49   .....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_143374

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           310     1e-86
IGHD3-10*01                                                                                           14.1    8.7  
IGHJ2*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TCTTCA	GGTTTGGAGAGTT	CCTACTCAGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGGATCTTCAGGTTTGGAGAGTTCCTACTCAGGACTGGTACTTCCACGTC	VKDLQVWRVPTQDWYFHV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  E  F  T  F  R  A  Y  G  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_936    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGAGTTCACCTTCCGTGCCTATGGCCTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  89.6% (224/250)  IGHV3-30*18  47   ............................T.GA.........A..AG.......A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  S  H  D  G  T  N  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_936    91   AGTGGGTGGCAGCGATATCCCATGATGGAACTAATAAGAACTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  89.6% (224/250)  IGHV3-30*18  137  ............TT.....AT.........G......AT......C............................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  N  T  P  D  L  Q  M  N  S  L  R  P  D  D  T  A  T  Y  Y  C  V  K  D  L  Q  V  W  R  V  
                    Query_936    181  GGAACACACCGGATCTGCAAATGAACAGCCTGAGACCTGACGACACGGCTACATATTACTGTGTGAAGGATCTTCAGGTTTGGAGAGTTC  270
V  89.6% (224/250)  IGHV3-30*18  227  A......G.T.T.......................G....G.........GTG..........C...A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  84.6% (11/13)    IGHD3-10*01  11   ----------------------------------------------------------------------------....C..G.....-  23

                                      IMGT--------------------->                                  
                                      P  T  Q  D  W  Y  F  H  V  W  G  R  G  T  L  V  S  F  S  S  
                    Query_936    271  CTACTCAGGACTGGTACTTCCACGTCTGGGGCCGTGGCACCCTGGTCAGTTTCTCCTCAG  330
J  90.2% (46/51)    IGHJ2*01     3    ---------...........G.TC........................C.G.........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_180242

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            360     1e-101
IGHD1-20*01                                                                                           14.1    8.5   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTAAACCGGGATCGT	GGTATAA	AGGCTACG	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAAACCGGGATCGTGGTATAAAGGCTACGACTGCTTTGACTAC	ARLKPGSWYKGYDCFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  I  H  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_937    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGGGATCCATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (239/248)  IGHV3-7*01   47   .........................................A.T.G.T.........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  T  Y  Y  V  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_937    91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGAGACATACTATGTGGACTCTTTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (239/248)  IGHV3-7*01   137  ....................C...............A................G....................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  L  K  P  G  S  W  Y  
                    Query_937    181  AGAACTCACTGTATCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGACTTAAACCGGGATCGTGGTATA  270
V  96.4% (239/248)  IGHV3-7*01   227  .........................C..........................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-20*01  1    ------------------------------------------------------------------------------------......  6

                                      GT-------------------->                                  
                                      K  G  Y  D  C  F  D  Y  W  G  P  G  T  L  V  S  V  S  S  
                    Query_937    271  AAGGCTACGACTGCTTTGACTACTGGGGCCCGGGAACCCTGGTCAGCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD1-20*01  7    .--------------------------------------------------------  7
J  93.8% (45/48)    IGHJ4*02     1    ---------...A.................A..............C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_103804

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           336     1e-94
IGHD6-13*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACTGG	GCAGCAG	GTGAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACTGGGCAGCAGGTGACTGACTAC	ARDTGQQVTDY	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	126	24	22	2	0	91.7
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  S  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_938    2    CCCTGTCCCTCACCTGCGCAGCCTCTGGATTCAGCTTCAGTTCCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGTCTGGAGT  91
V  93.5% (231/247)  IGHV3-21*01  50   .....AGA...T....T................C.......AG.......................................G.......  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  S  I  S  N  S  S  S  F  I  F  H  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  T  
                    Query_938    92   GGGTCTCATCCATTAGTAATAGTAGTAGTTTCATATTCCACGCAGACTCAGTGAAGGGCCGATTCACCATATCCAGAGACGACGCCACGA  181
V  93.5% (231/247)  IGHV3-21*01  140  ..................G...........A.....A.T...............................C.........A......A..  229
                                      W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  T  G  Q  Q  V  T  D  
                    Query_938    182  ACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATACTGGGCAGCAGGTGACTGACT  271
V  93.5% (231/247)  IGHV3-21*01  230  ...................................................................-----------------------  296
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD6-13*01  8    -------------------------------------------------------------------------.......----------  14
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_938    272  ACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  307
J  97.6% (40/41)    IGHJ4*02     13   ........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_103807

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           315     5e-88
IGHD3-16*01                                                                                           12.2    32   
IGHJ2*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGGCG	TGGGGG	GATCAAGGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGGCGTGGGGGGATCAAGGGATCCTGGTACTCCGATCTC	ARVRRGGIKGSWYSDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	225	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  E  M  N  W  V  R  Q  A  T  G  K  G  L  
                    Query_939    1    GGTCCCTGAGACTTTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGACATGAAATGAATTGGGTCCGCCAGGCTACAGGAAAGGGGCTGG  90
V  90.4% (225/249)  IGHV3-48*03  47   .............C................................TT..........C...............C....G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  T  G  S  T  L  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_939    91   AGTGGGTTTCACACATCAGTACTGGTAGTACTCTAATAAATTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  90.4% (225/249)  IGHV3-48*03  137  ...........T....T....G.A..G...G.ACC...T.C................................................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      A  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  F  Y  Y  C  A  R  V  R  R  G  G  I  K  
                    Query_939    181  CGAATTCACTCTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTTTCTATTACTGTGCGAGAGTCCGGCGTGGGGGGATCAAGG  270
V  90.4% (225/249)  IGHV3-48*03  227  A...C.....G.................C.....................G.T................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------------......--------  22

                                      T------------------>                                  
                                      G  S  W  Y  S  D  L  W  G  R  G  P  L  V  V  V  S  S  
                    Query_939    271  GATCCTGGTACTCCGATCTCTGGGGCCGTGGCCCCCTGGTCGTTGTCTCCTCAG  324
J  92.0% (46/50)    IGHJ2*01     4    ----........T...................A........AC...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_103806

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           316     2e-88
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ2*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAAG	AGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTGCCAGGAGACTGGTATTTCGATCTC	EIPPRGARVAARRLVFRS	239	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	103	52	45	6	1	86.5
CDR2-IMGT	104	124	21	18	3	0	85.7
FR3-IMGT	125	238	114	110	4	0	96.5
CDR3-IMGT (germline)	239	244	6	6	0	0	100
Total	N/A	N/A	244	225	18	1	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><---------------------FR2-IMGT---------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  R  N  Y  W  S  L  D  S  A  G  P  R  G  E  T  G 
                    Query_940    1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCACTAGAAACTACTGGAGTCTGGATTCGGCAGGCCCCAGGGGAGAGACTGGA  90
V  92.2% (225/244)  IGHV4-59*08  49   ...................C...........G........G...TT..........-......C......C........A..G.......  137
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S   W  I  R  Q  P  P  G  K  G  L  E

                                      ------------><-----CDR2-IMGT-----><----------------------------------------------------FR3
                                       V  D  S  V  Y  P  L  Q  W  G  H  Q  L  Q  P  L  P  Q  E  S  S  H  H  I  T  R  H  V  Q  E 
                    Query_940    91   GTGGATAGCGTATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAA  180
V  92.2% (225/244)  IGHV4-59*08  138  ......T.G.......T...........AG...........................................G................  227
                                        W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N

                                      -IMGT----------------------------------------------------><-----------------------CDR3-IMG
                                       P  V  L  P  E  D  D  L  C  D  R  R  R  H  G  H  V  L  L  C  E  I  P  P  R  G  A  R  V  A 
                    Query_940    181  CCAGTTCTCCCTGAAGATGACCTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGATTCCTCCCCGCGGTGCAAGAGTGGCT  270
V  92.2% (225/244)  IGHV4-59*08  228  ................C...G.........................G.................--------------------------  291
                                        Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                           
D  100.0% (8/8)     IGHD6-19*01  10   -----------------------------------------------------------------------------------.......  16

                                      T----------------------->                                  
                                       A  R  R  L  V  F  R  S  L  G  P  W  H  P  V  R  C  L  V   
                    Query_940    271  GCCAGGAGACTGGTATTTCGATCTCTGGGGCCGTGGCACCCTGTTCGCTGTCTCGTCAG  329
D  100.0% (8/8)     IGHD6-19*01  17   .----------------------------------------------------------  17
J  92.2% (47/51)    IGHJ2*01     3    --------.......C...........................G..A.......C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_103801

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           406     1e-115
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	TCCTCC	GGGTATATCAGTGGCTGG	GACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGATCCTCCGGGTATATCAGTGGCTGGGACGACTACAACGCTATGGACGTC	AGSSGYISGWDDYNAMDV	289	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	74	1	0	98.7
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	19	5	0	79.2
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	294	6	5	1	0	83.3
Total	N/A	N/A	294	277	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_941    1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGT  90
V  94.2% (277/294)  IGHV1-69*01  1    .......................G.................................................................C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  F  A  I  S  W  V  R  Q  A  P  G  Q  G  R  E  W  M  G  G  I  I  A  L  F  G  I  P  N  Y 
                    Query_941    91   AGTTTTGCTATCAGCTGGGTGCGACAGGCCCCAGGACAAGGGCGTGAGTGGATGGGAGGGATCATCGCTCTCTTTGGAATACCAAACTAC  180
V  94.2% (277/294)  IGHV1-69*01  91   ..C.A...........................T..........T......................C..A.......T.C.G........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  G  F  Q  G  R  V  M  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_941    181  GCACAGGGGTTCCAGGGCAGAGTCATGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTAAGATCTGAGGAC  270
V  94.2% (277/294)  IGHV1-69*01  181  ......AA.................C...................................................G............  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  G  S  S  G  Y  I  S  G  W  D  D  Y  N  A  M  D  V  W  G  Q  G  T  T 
                    Query_941    271  ACGGCCGTCTATTACTGTGCGGGATCCTCCGGGTATATCAGTGGCTGGGACGACTACAACGCTATGGACGTCTGGGGCCAAGGGACCACG  360
V  94.2% (277/294)  IGHV1-69*01  271  ........G............A..------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.4% (17/18)    IGHD6-19*01  1    ------------------------------.......G..........------------------------------------------  18
J  96.2% (51/53)    IGHJ6*02     10   ----------------------------------------------------.....T...G............................  47

                                                     
                                       V  T  V  S  S 
                    Query_941    361  GTCACCGTCTCCTCA  375
J  96.2% (51/53)    IGHJ6*02     48   ...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_103800

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           280     1e-77
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              48.8    8e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	CCTGTCCCGCGTTATGG	TTTTTGGAATGGTTATT	CCAAAATCTAACTCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCCTGTCCCGCGTTATGGTTTTTGGAATGGTTATTCCAAAATCTAACTCTTTCGACACC	ARGLSRVMVFGMVIPKSNSFDT	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	212	33	0	86.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  L  D  G  H  Y  W  T  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_942    1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGGTCGCTCGATGGTCACTACTGGACCTGGATACGCCAGGCCCCAGGGAAGGGTCTGGAG  90
V  86.5% (212/245)  IGHV4-34*01  49   ..................G......A.........CT..AG....T.........G......C......C.............G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  T  G  D  T  N  Y  N  S  S  L  K  S  R  V  G  L  S  V  D  T  S  R  N 
                    Query_942    91   TGGATTGGGGAGATTTCTCATACTGGAGACACCAACTACAACTCGTCCCTCAAGAGTCGAGTCGGCTTGTCAGTTGACACGTCCAGGAAC  180
V  86.5% (212/245)  IGHV4-34*01  139  ...........A..CAA.....G....AG.............C....................AC.A.A.....A..........A....  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  T  S  L  T  G  A  D  T  G  V  Y  Y  C  A  R  G  L  S  R  V  M  V  F  G 
                    Query_942    181  CAGTTCTCCCTGAAGTTGACCTCCCTGACCGGCGCGGACACGGGTGTCTATTACTGTGCGCGAGGCCTGTCCCGCGTTATGGTTTTTGGA  270
V  86.5% (212/245)  IGHV4-34*01  229  ...............C...G...TG......C...........C...G............A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  94.1% (16/17)    IGHD3-3*01   10   ----------------------------------------------------------------------------------........  17

                                      -IMGT--------------------------->                                  
                                       M  V  I  P  K  S  N  S  F  D  T  W  G  P  G  V  L  V  T  V  S  P  
                    Query_942    271  ATGGTTATTCCAAAATCTAACTCTTTCGACACCTGGGGCCCGGGAGTCCTGGTTACCGTCTCCCCAG  337
D  94.1% (16/17)    IGHD3-3*01   18   G........----------------------------------------------------------  26
J  86.0% (37/43)    IGHJ5*02     9    ------------------------......C.........A....AC......C.........T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_180244

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           325     2e-91
IGHD1-26*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TTCCCGTCATC	AGTGGGAGC	CGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTCCCGTCATCAGTGGGAGCCGCGACTAC	AKLPVISGSRDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_943    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTCCTACTGGAGTTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  92.6% (226/244)  IGHV4-59*08  49   ...........................................G..A.........C.................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_943    91   TGGATTGGATATATCTATTCTAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGCGTCACCATCTCGGTAGACACGTCCAAGAAG  180
V  92.6% (226/244)  IGHV4-59*08  139  ........G..........AC..............C.......................A........A..A.................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  K  L  P  V  I  S  G  S  R  D 
                    Query_943    181  CAGTTCTCCCTGAAACTGAATTCTGTGACCGCCGCAGACTCGGCCGTCTATTACTGTGCGAAACTTCCCGTCATCAGTGGGAGCCGCGAC  270
V  92.6% (226/244)  IGHV4-59*08  229  ..............G....GC..................A.......G.............G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD1-26*01  6    ---------------------------------------------------------------------------.........------  14
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_943    271  TACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   ..............................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_103802

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            310     1e-86
IGHD2-21*01                                                                                           12.2    31   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	TGGTGA	AGTATTCCTTGGATC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGGTGAAGTATTCCTTGGATCACTTTGACCAC	ARLVKYSLDHFDH	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  N  D  H  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_944    1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATTACCAATGATCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.2% (222/246)  IGHV4-4*02   49   ..................GC...........G......C.G..G.AG.A.........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  R  S  G  S  T  T  Y  N  P  S  L  Q  S  R  V  A  F  S  V  D  K  S  K 
                    Query_944    91   GAGTGGATTGGAGAAATCTATCGTAGTGGGAGCACCACTTACAACCCGTCCCTTCAGAGTCGAGTCGCCTTCTCAGTAGACAAGTCCAAG  180
V  90.2% (222/246)  IGHV4-4*02   139  ...........G..........A..............AC..............CA...........A..A.A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  F  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  V  K  Y  S  L  D  H 
                    Query_944    181  AACCAGTTCTCCCTGAGTCTGAGATCTGTGACCGCCGCCGATACGGCCGTATATTACTGTGCGAGATTGGTGAAGTATTCCTTGGATCAC  270
V  90.2% (222/246)  IGHV4-4*02   229  ................AG.....C..............G..C........G...............------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-21*01  13   -------------------------------------------------------------------......-----------------  18
J  95.6% (43/45)    IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                                  
                                       F  D  H  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_944    271  TTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  313
J  95.6% (43/45)    IGHJ4*02     6    ......T................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_96113

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            371     7e-105
IGHD2-2*01                                                                                            12.2    34    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATC	TAGTAACACCTG	GCACTCGGGGTTTTGGT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTAGTAACACCTGGCACTCGGGGTTTTGGTTAC	AGHLVTPGTRGFGY	264	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	77	27	25	2	0	92.6
FR2-IMGT	78	128	51	49	2	0	96.1
CDR2-IMGT	129	149	21	18	3	0	85.7
FR3-IMGT	150	263	114	108	6	0	94.7
CDR3-IMGT (germline)	264	269	6	5	1	0	83.3
Total	N/A	N/A	269	253	16	0	94.1


Alignments

                                     <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                        G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  S  G  G  S  I  T  S  S  N  W  W  S  W  V  
                    Query_945   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCAGCAGTAACTGGTGGAGTTGGGTCC  90
V  94.1% (253/269)  IGHV4-4*02  26   ................T....G.........................................G...T......................  115
                                        G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                     --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                     R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  G  G  N  T  N  Y  N  P  S  L  E  S  R  V  
                    Query_945   91   GCCAGCCCCCCGGGAAGGGTCTGGAGTGGATTGGGGAAATCTATCATGGTGGAAACACCAACTACAACCCGTCCCTCGAGAGTCGAGTCA  180
V  94.1% (253/269)  IGHV4-4*02  116  ..........A........G...........................A....G.G......................A............  205
                                     R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                     ----------------------FR3-IMGT----------------------------------------------------><------
                                     T  I  S  V  D  K  S  N  N  Q  F  S  L  R  L  N  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  
                    Query_945   181  CCATATCAGTAGACAAGTCCAACAACCAGTTCTCCCTGAGGCTGAACTCTCTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGGGAC  270
V  94.1% (253/269)  IGHV4-4*02  206  ......................G................A.....G....G...........................A.......A..-  294
                                     T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  

                                     ----------CDR3-IMGT--------------->                                  
                                     H  L  V  T  P  G  T  R  G  F  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_945   271  ATCTAGTAACACCTGGCACTCGGGGTTTTGGTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  83.3% (10/12)    IGHD2-2*01  13   ---.....C..G...------------------------------------------------------  24
J  100.0% (37/37)   IGHJ4*02    12   --------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_96112

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           330     1e-92
IGHD5-18*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACAAGGGGATAA	CTATAGTTAC	GAATCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACAAGGGGATAACTATAGTTACGAATCT	AQGDNYSYES	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	241	2	2	0	0	100
Total	N/A	N/A	241	226	15	0	93.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  W  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_946    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTTGGAACTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.8% (226/241)  IGHV3-53*01  47   ............................................A.C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  A  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  K  
                    Query_946    91   AGTGGGTCTCGGTCATTTATGCCGGTGGTAGCACATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  93.8% (226/241)  IGHV3-53*01  137  ..........A..T......AG...............C..C........................................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------CDR3-IMGT---------> 
                                      K  V  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  Q  G  D  N  Y  S  Y  E  S  
                    Query_946    181  AAGTGTTGTATCTTCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCACAAGGGGATAACTATAGTTACGAATCTT  270
V  93.8% (226/241)  IGHV3-53*01  227  .CAC.C.............G.........................................-----------------------------  287
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  90.0% (9/10)     IGHD5-18*01  11   -------------------------------------------------------------------------....G.....-------  20
J  97.1% (33/34)    IGHJ4*02     15   -----------------------------------------------------------------------------------------.  15

                                                                       
                                      W  G  R  G  T  L  V  T  V  S  S  
                    Query_946    271  GGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  303
J  97.1% (33/34)    IGHJ4*02     16   ......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_96111

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            420     7e-120
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	274	5	0	98.2


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_947   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  98.2% (274/279)  IGHV6-1*01  26   ...........................................................G......G....AG.................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_947   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.2% (274/279)  IGHV6-1*01  116  ..........................................................................................  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_947   181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.2% (274/279)  IGHV6-1*01  206  ..............A...........................................................................  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------CDR3-IMGT--------->                                  
                                     C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_947   271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  98.2% (274/279)  IGHV6-1*01  296  .........---------------------------------------------------------  304
                                     C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02    4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_96110

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           288     5e-80
IGHD2-2*01                                                                                            12.2    32   
IGHJ2*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-2*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TACCAG	TTTTTATCCCCCCTCGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACCAGTTTTTATCCCCCCTCGGACTGGATCTTCGATCTC	ARDTSFYPPSDWIFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  K  A  S  G  F  N  F  K  N  Y  N  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_948    1    GGTCCCTGAGACTCTCCTGTAAAGCCTCTGGATTCAACTTCAAGAACTACAACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  86.8% (217/250)  IGHV3-21*01  47   ....................GC..............C.....GT.G...T.G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  P  R  S  N  D  I  Q  Y  A  A  S  M  Q  G  R  I  T  I  S  R  D  N  A  
                    Query_948    91   AGTGGGTCTCATCGATTAGGCCTAGGAGCAATGACATACAATACGCAGCCTCAATGCAGGGCCGAATTACCATCTCCAGAGACAACGCCA  180
V  86.8% (217/250)  IGHV3-21*01  137  .............C.....TAG...T..T.G.T.....T.C.......A....G..A........T.C......................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  S  S  L  Y  L  H  M  N  N  L  G  P  E  D  T  A  I  Y  F  C  A  R  D  T  S  F  Y  P  P  
                    Query_948    181  ACAGCTCACTGTATCTCCACATGAACAACCTGGGACCCGAGGACACGGCTATCTATTTCTGTGCGAGAGATACCAGTTTTTATCCCCCCT  270
V  86.8% (217/250)  IGHV3-21*01  227  .G.A............G..A.......G....A..G..............G.G....A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------------------------------------------------......--------------  21

                                      T------------------>                                  
                                      S  D  W  I  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_948    271  CGGACTGGATCTTCGATCTCTGGGGCCGTGGCACCCTCGTCACAGTCTCCTCAG  324
J  92.2% (47/51)    IGHJ2*01     3    ---.....TA...........................G.....T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_103809

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           332     4e-93
IGHD5-18*01                                                                                           19.9    0.16 
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD5-18*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	TTCCCCC	CAGCTACGGTTAC	ATTTCCGGTT	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGTTCCCCCCAGCTACGGTTACATTTCCGGTTCTTTTTATATC	HSSPQLRLHFRFFLY	250	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	24	6	0	80
FR3-IMGT	135	249	115	109	5	1	94.8
CDR3-IMGT (germline)	250	256	7	7	0	0	100
Total	N/A	N/A	256	236	19	1	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  Y  A  W  M  S  W  V  R  Q  A  T  G  K  G  L  
                    Query_949    1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACTTTCAGTTATGCCTGGATGAGTTGGGTCCGCCAAGCTACAGGGAAGGGGCTGG  90
V  92.2% (236/256)  IGHV3-15*01  47   .......T.............C......................A.C...........C...........G...C...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  I  G  R  V  K  S  T  D  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  V  S  R  D  
                    Query_949    91   AGTGGATTGGCCGTGTTAAAAGCACGGATGATGGGGGGACAACAGACTACGCTGCACCCGTAAAAGGCAGATTTACTGTCTCAAGAGATG  180
V  92.2% (236/256)  IGHV3-15*01  137  .....G........A.........AAAC......T..........................G...........C..CA............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT-----------------------------------------------------><-------------------C
                                      D  S  K  K  H  A  V  S  A  N  E  Q  P  E  N  R  G  H  S  R  V  L  L  Y  H  S  S  P  Q  L  
                    Query_949    181  ATTCAAAAAAACATGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGTTCCCCCCAGCTAC  270
V  92.2% (236/256)  IGHV3-15*01  227  ....-........C..............................................................--------------  301
                                      D  S   K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                
D  92.3% (12/13)    IGHD5-18*01  8    -----------------------------------------------------------------------------------......T  14

                                      DR3-IMGT------------------>                                  
                                      R  L  H  F  R  F  F  L  Y  L  G  P  R  D  N  G  L  L  L  F   
                    Query_949    271  GGTTACATTTCCGGTTCTTTTTATATCTGGGGCCAAGGGACAATGGTCTCCTTCTCTTCAG  331
D  92.3% (12/13)    IGHD5-18*01  15   ......-------------------------------------------------------  20
J  93.3% (42/45)    IGHJ3*02     6    ----------------.....G..........................A..G.........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_103808

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           344     6e-97
IGHD6-13*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCTGG	GCAGCAG	GTGAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGCTGGGCAGCAGGTGACTGACTAT	ARDAGQQVTDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  N  Y  G  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_950    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTCAGTAACTATGGCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  94.0% (235/250)  IGHV3-21*01  47   ....................................CC.......G....A..............................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  G  S  D  Y  I  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_950    91   AGTGGGTCTCATCCATTAGTAGTGGTAGTGATTACATATACTACGTAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-21*01  137  .......................A.....AG..............C............................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      R  N  S  V  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  A  G  Q  Q  V  T  
                    Query_950    181  GGAACTCAGTGTTTCTACAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTATATTACTGTGCGAGAGATGCTGGGCAGCAGGTGACTG  270
V  94.0% (235/250)  IGHV3-21*01  227  A.......C...A...G...................C...............G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-13*01  8    ----------------------------------------------------------------------------.......-------  14
J  92.7% (38/41)    IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  P  G  T  Q  V  T  V  S  S  
                    Query_950    271  ACTATTGGGGCCCGGGAACCCAGGTCACCGTCTCCTCAG  309
J  92.7% (38/41)    IGHJ4*02     10   ....C.......A........T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_96115

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*09                                                                                           353     1e-99
IGHD2-15*01                                                                                           16.1    2.4  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*09	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGT	GTGGTGGGAGC	CCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTGGTGGGAGCCCCCCTTGACTAT	ARGGVVGAPLDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	258	32	0	89


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  Q  P  G  S  S  V  K  V  S  C  K  T  S  G  G  S  F  T  S  Y
                    Query_951    1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGCAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACCTCTGGAGGTAGTTTCACCAGCTA  90
V  89.0% (258/290)  IGHV1-69*09  6    ...............................A................................G.T........C.CC....G......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  M  P  L  H  G  I  G  N  N  A  E
                    Query_951    91   TGCGATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGTATCATGCCTCTGCATGGCATAGGAAATAACGCAGA  180
V  89.0% (258/290)  IGHV1-69*09  96   ...T..................................................G.....C...A.C.T...T....C...CT.....C.  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  I  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  L  Q  G  R  V  T  I  T  A  D  A  S  R  R  T  A  Y  M  E  L  R  S  L  R  S  G  D  T  A
                    Query_951    181  GAAGCTCCAGGGCAGAGTCACGATAACCGCGGACGCATCAAGGAGGACAGCCTACATGGAGTTGAGAAGCCTGAGATCTGGTGACACGGC  270
V  89.0% (258/290)  IGHV1-69*09  186  ....T...................T.........AA...C.C...C...............C....C.............AG........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  F  C  A  R  G  G  V  V  G  A  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_951    271  CATGTATTTTTGTGCGAGAGGAGGTGTGGTGGGAGCCCCCCTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  89.0% (258/290)  IGHV1-69*09  276  .G......AC..........---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  90.9% (10/11)    IGHD2-15*01  12   -------------------------.......T...-----------------------------------------------  22
J  97.6% (41/42)    IGHJ4*02     7    -----------------------------------------.......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_96114

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           358     4e-101
IGHD2-15*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGC	ATTGTAATGGT	AACAGGTGTTGGGG	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGCATTGTAATGGTAACAGGTGTTGGGGCGTC	ARDRHCNGNRCWGV	239	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	28	25	25	0	0	100
CDR1-IMGT	29	52	24	23	1	0	95.8
FR2-IMGT	53	103	51	49	2	0	96.1
CDR2-IMGT	104	124	21	20	1	0	95.2
FR3-IMGT	125	238	114	111	3	0	97.4
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	243	236	7	0	97.1


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        L  R  L  S  C  A  A  S  G  F  T  V  S  N  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  E  W
                    Query_952    4    CCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAACAACTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTG  93
V  97.1% (236/243)  IGHV3-53*01  51   .........................................G...........G....................................  140
                                        L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W

                                      ---------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IM
                                        V  S  L  I  Y  S  G  G  T  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  N  T
                    Query_952    94   GGTCTCACTTATTTATAGCGGTGGTACCACACACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGAACAC  183
V  97.1% (236/243)  IGHV3-53*01  141  .......G..................G....T...................................................A......  230
                                        V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T

                                      GT----------------------------------------------------><----------------CDR3-IMGT---------
                                        L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  R  H  C  N  G  N  R  C  W
                    Query_952    184  GCTGTATCTTCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGATAGGCATTGTAATGGTAACAGGTGTTG  273
V  97.1% (236/243)  IGHV3-53*01  231  .............................C.................................---------------------------  293
                                        L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                              
D  90.9% (10/11)    IGHD2-15*01  6    --------------------------------------------------------------------......G....-----------  16

                                      ------>                                 
                                        G  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_952    274  GGGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  313
J  100.0% (37/37)   IGHJ6*02     26   ---.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_52315

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            254     1e-69
IGHD1-20*01                                                                                           18.0    0.64 
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD1-20*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	GAGACCGGATGTGGTGC	TAACTGGCACGA	AACGAGGTTACACGAAACGAGGTG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGTGAGAGACCGGATGTGGTGCTAACTGGCACGAAACGAGGTTACACGAAACGAGGTGACTGGTTCGACCCC	ACERPDVVLTGTKRGYTKRGDWFDP	243	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	15	9	0	62.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	12	12	0	50
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	206	44	0	82.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  L  P  F  A  D  H  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_953    1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTGGACTCCCCTTTGCTGACCATTACATGAGCTGGGTCCGCCAGGCTCCGGGGAAGGGACTGG  90
V  82.4% (206/250)  IGHV3-7*03   47   .....................C..C.......T..A.....AG.AG.T...GG.......................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  Q  I  P  P  G  G  P  D  A  Y  Y  A  E  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_953    91   AGTGGGTGGCCCAAATTCCGCCCGGTGGACCTGATGCGTACTATGCGGAATCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  82.4% (206/250)  IGHV3-7*03   137  ...........A.C..AAA..AA.A....AG...GAAA.......T...C.......A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  K  S  V  H  L  Q  M  D  S  L  R  A  D  D  T  A  L  Y  R  C  A  C  E  R  P  D  V  V  L  
                    Query_953    181  AGAAGTCAGTTCATCTGCAAATGGACAGCCTGAGAGCCGACGACACAGCCCTCTACCGCTGTGCGTGTGAGAGACCGGATGTGGTGCTAA  270
V  82.4% (206/250)  IGHV3-7*03   227  ....C...C.GT...........A................G.....G...G.G..TTA.......A.A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD1-20*01  5    ---------------------------------------------------------------------------------------...  7

                                      -----CDR3-IMGT-------------------------------->                                  
                                      T  G  T  K  R  G  Y  T  K  R  G  D  W  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_953    271  CTGGCACGAAACGAGGTTACACGAAACGAGGTGACTGGTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  351
D  91.7% (11/12)    IGHD1-20*01  8    ....A....------------------------------------------------------------------------  16
J  97.9% (47/48)    IGHJ5*02     4    ---------------------------------..............................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_52314

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           297     7e-83
IGHD2-15*01                                                                                           12.2    33   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GTTCCGGGGCCCGTTAC	GGATAT	GG	CTACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTTCCGGGGCCCGTTACGGATATGGCTACATTGACTTC	ARGSGARYGYGYIDF	252	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	251	123	106	8	9	86.2
CDR3-IMGT (germline)	252	258	7	7	0	0	100
Total	N/A	N/A	258	226	23	9	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  N  H  W  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_954    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTTAGTTTCAGTAATCACTGGATGCACTGGGTCCGCCAACCTCCAGGGAAGGGGCTGG  90
V  87.6% (226/258)  IGHV3-74*01  47   ............................T.....C.CC.......GCT.......................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  I  S  G  I  D  S  A  G  T  K  T  I  Y  A  D  P  V  D  P  V  K  G  R  F  T  I  S  R  
                    Query_954    91   TGTGGATCTCAGGTATTGATAGTGCTGGGACTAAGACAATCTACGCGGACCCCGTGGACCCCGTGAAGGGCCGATTCACCATCTCCAGAG  180
V  87.6% (226/258)  IGHV3-74*01  137  .....G.....C.....A......A.....G..GC....G......---------....T..............................  217
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A           D  S  V  K  G  R  F  T  I  S  R  

                                      -----FR3-IMGT---------------------------------------------------------><-----------------C
                                      D  N  A  K  N  M  L  Y  L  Q  M  E  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  S  G  A  
                    Query_954    181  ACAACGCCAAAAACATGCTGTATTTGCAAATGGAGAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGAGGTTCCGGGGCCC  270
V  87.6% (226/258)  IGHV3-74*01  218  ..........G....C.......C........A.C..........................G................------------  295
                                      D  N  A  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R              

                                      DR3-IMGT----------------->                                  
                                      R  Y  G  Y  G  Y  I  D  F  W  G  Q  G  A  R  V  T  V  S  S  
                    Query_954    271  GTTACGGATATGGCTACATTGACTTCTGGGGCCAGGGAGCCCGGGTCACCGTCTCCTCAG  330
D  100.0% (6/6)     IGHD2-15*01  2    -----......-------------------------------------------------  7
J  91.5% (43/47)    IGHJ4*02     2    -------------....T......A.............A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_52317

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     1e-109
IGHD1-26*01                                                                                           23.8    0.012 
IGHJ5*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGTATGCCGTCC	TGGGAGCTACTA	GT	TGGTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTATGCCGTCCTGGGAGCTACTAGTTGGTGCGACCCC	AKYAVLGATSWCDP	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	267	20	0	93


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  E  P  G  E  S  L  R  I  S  C  R  G  S  G  Y  T  F  I  S  Y
                    Query_955    1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAGAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGCTCTGGGTACACCTTTATTAGTTA  90
V  93.0% (267/287)  IGHV5-51*01  6    ....................C..........A..................A...........A...T.....A....G.....CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  N  P
                    Query_955    91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGAGACCAGATACAACCC  180
V  93.0% (267/287)  IGHV5-51*01  96   C.......G...........................................A......................T..........G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  L  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  S  L  K  A  S  D  A  A
                    Query_955    181  GTCCTTCCAAGGCCACGTCACCCTCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCACTGGAGCAGCCTGAAGGCCTCGGACGCCGC  270
V  93.0% (267/287)  IGHV5-51*01  186  ...............G......A.....................G...............G........................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  K  Y  A  V  L  G  A  T  S  W  C  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_955    271  CATGTATTACTGTGCGAAGTATGCCGTCCTGGGAGCTACTAGTTGGTGCGACCCCTGGGGCCAGGGAACCCTAGTCATCGTCTCCTCAG  359
V  93.0% (267/287)  IGHV5-51*01  276  .................------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                          
D  100.0% (12/12)   IGHD1-26*01  8    -----------------------------............------------------------------------------------  19
J  93.5% (43/46)    IGHJ5*02     6    -------------------------------------------....T........................G....C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_52310

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           296     2e-82
IGHD3-10*01                                                                                           12.2    31   
IGHJ2*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGA	CGGGGA	TTGGAAG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGACGGGGATTGGAAGTTCGATCTC	ARHDGDWKFDL	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	220	31	0	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  I  S  S  R  F  F  W  G  W  L  R  Q  P  P  K  K  G 
                    Query_956    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCATCAGTAGTCGTTTCTTCTGGGGCTGGCTCCGCCAGCCCCCAAAGAAGGGG  90
V  87.6% (220/251)  IGHV4-39*01  49   ...............................G........G.......A...A..A..........A..............GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  H  D  S  G  N  R  W  S  N  P  T  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_956    91   CTGGAGTGGATTGGGACTATCCATGACAGTGGGAACAGATGGTCCAACCCGACCCTCAAGAGTCGACTCACCATATCGGTGGACACGTCC  180
V  87.6% (220/251)  IGHV4-39*01  139  ................G....T..T.T.......G..CC.AC.A.......T..............G..........C..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       M  N  Q  F  S  L  T  I  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  H  D  G  D  W  K  F 
                    Query_956    181  ATGAACCAGTTCTCCCTGACGATTTCCTCTATGACCGCCGCTGACACGGCTGTCTATTACTGTGCGAGACATGACGGGGATTGGAAGTTC  270
V  87.6% (220/251)  IGHV4-39*01  229  .A.................A.C.GAG....G..........A...........G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01  15   --------------------------------------------------------------------------......----------  20
J  95.3% (41/43)    IGHJ2*01     11   ---------------------------------------------------------------------------------------...  13

                                      ----->                                  
                                       D  L  W  G  R  G  S  Q  V  T  V  S  S  
                    Query_956    271  GATCTCTGGGGCCGTGGCTCCCAGGTCACTGTCTCCTCAG  310
J  95.3% (41/43)    IGHJ2*01     14   ..................A...T.................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_52313

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           339     2e-95
IGHD2-2*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCCAGCACGTTATTTATGTGGTTCCC	GCTGCTAT	TTAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCCCAGCACGTTATTTATGTGGTTCCCGCTGCTATTTATTTTGACTAC	ARAQHVIYVVPAAIYFDY	246	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  T  W  I  R  Q  H  P  G  K  G  
                    Query_957    4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  93.6% (233/249)  IGHV4-31*01  50   .....TCC...A....C...........................................G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  D  I  Y  N  S  G  T  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  L  D  A  S  
                    Query_957    94   TGGAGTGGATTGGGGACATCTATAACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCTAGTCACCATATCACTAGACGCGTCTA  183
V  93.6% (233/249)  IGHV4-31*01  140  ..............T........T.........G.................................T.........G.....A......  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  Q  F  S  L  Q  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  Q  H  V  I  Y  V  
                    Query_957    184  AGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGCGAGCCCAGCACGTTATTTATGTGG  273
V  93.6% (233/249)  IGHV4-31*01  230  .................A......G..............................T.........A...---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       

                                      IMGT--------------------->                                 
                                      V  P  A  A  I  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_957    274  TTCCCGCTGCTATTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  332
D  100.0% (8/8)     IGHD2-2*01   21   -----........----------------------------------------------  28
J  100.0% (42/42)   IGHJ4*02     6    -----------------..........................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_52312

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           297     7e-83
IGHD3-9*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGACCCA	TACGGTATTTTG	GCTATTGAGAAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGTGACCCATACGGTATTTTGGCTATTGAGAAG	ATGDPYGILAIEK	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	42	9	0	82.4
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  N  Y  W  S  W  I  R  Q  S  P  A  K  G 
                    Query_958    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGCCAACTACTGGAGTTGGATCCGCCAATCCCCTGCAAAGGGC  90
V  88.0% (220/250)  IGHV4-31*03  49   .................................................GTT..........C...........GCA...A.GG......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  T  T  E  Y  N  P  S  L  K  S  R  L  T  M  S  I  D  P  S 
                    Query_958    91   CTCGAGTGGATTGGATACATCTATTATGGTGGGACCACCGAGTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCCATTGACCCGTCT  180
V  88.0% (220/250)  IGHV4-31*03  139  ..G...........G...........CA......G....T.C...........C............G.T.....A..AG.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       T  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  D  P  Y  G  I  L 
                    Query_958    181  ACGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGTGACCCATACGGTATTTTG  270
V  88.0% (220/250)  IGHV4-31*03  229  .A...................C...G...........................G.............G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD3-9*01   5    ------------------------------------------------------------------------------....A.......  16

                                      ----------->                                
                                       A  I  E  K  W  G  Q  G  T  L  V  T  V  S  S
                    Query_958    271  GCTATTGAGAAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
J  100.0% (32/32)   IGHJ4*02     15   ------------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_52318

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           369     2e-104
IGHD1-26*01                                                                                           12.2    31    
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATAT	GTGGGA	AGGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATATGTGGGAAGGTACTACTTTGACTAC	AREYVGRYYFDY	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_959    4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGTCAGCCCCCAGGGAAGGGAC  93
V  97.2% (243/250)  IGHV4-61*01  50   .....TCC...A..........................................................G...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  Y  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_959    94   TGGAGTGGATTGGGTATATCTATTACAGTGGGTACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCA  183
V  97.2% (243/250)  IGHV4-61*01  140  ................................AG........................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  Y  V  G  R  Y  Y  
                    Query_959    184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAATATGTGGGAAGGTACTACT  273
V  97.2% (243/250)  IGHV4-61*01  230  ......................................................................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-26*01  7    --------------------------------------------------------------------------......----------  12
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_959    274  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_277182

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           357     1e-100
IGHD6-13*01                                                                                           21.8    0.041 
IGHJ3*01                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  L  S  G  G  S  I  S  S  G  G  F  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_960    1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGGCTCCATCAGCAGTGGTGGTTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.6% (239/250)  IGHV4-31*03  49   .....................G..............................A........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_960    91   CTGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCT  180
V  95.6% (239/250)  IGHV4-31*03  139  .....................T..................A.................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V 
                    Query_960    181  AAGAACCAATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTA  270
V  95.6% (239/250)  IGHV4-31*03  229  ........G..........A.....GC...............................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD6-13*01  11   ------------------------------------------------------------------------...........-------  21

                                      ----------------->                                  
                                       G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_960    271  GGCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  98.0% (48/49)    IGHJ3*01     2    ---.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_277183

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           366     2e-103
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCAAC	GGGTATAGAAGTGGC	AGATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAACGGGTATAGAAGTGGCAGATAACTACTACTATGGTTTGGACGTC	AATGIEVADNYYYGLDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	260	26	0	90.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  T  C  A  A  S  G  F  T  F  R  S  H
                    Query_961    1    GCAGCTGGTGCAGTCTGGAGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCACCTGTGCAGCCTCTGGATTCACCTTCAGAAGTCA  90
V  90.9% (260/286)  IGHV3-30*03  6    ..........G.......G....................................T............................T..CT.  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  M  Q  W  V  R  Q  A  P  G  K  G  L  E  W  L  A  V  I  S  F  N  G  S  H  T  Y  Y  A  D
                    Query_961    91   TGGCATGCAGTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAATGGTTGGCAGTTATCTCATTTAATGGAAGTCATACATACTATGCAGA  180
V  90.9% (260/286)  IGHV3-30*03  96   .........C................................G...G..........A....A.G........A...A............  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  T  V  S  R  D  N  S  K  N  A  L  Y  L  Q  I  A  S  L  R  S  A  D  T  A
                    Query_961    181  CTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCAAGAACGCACTGTATCTGCAAATAGCCAGCCTGAGATCTGCGGACACGGC  270
V  90.9% (260/286)  IGHV3-30*03  186  ...............A......A.......................A.G..............GAA..........G...A.........  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  F  C  A  A  T  G  I  E  V  A  D  N  Y  Y  Y  G  L  D  V  W  G  H  G  T  T  V  T  V
                    Query_961    271  TGTTTACTTCTGTGCGGCAACGGGTATAGAAGTGGCAGATAACTACTACTATGGTTTGGACGTCTGGGGCCACGGGACCACGGTCACCGT  360
V  90.9% (260/286)  IGHV3-30*03  276  ...G..T.A.......--------------------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                           
D  93.3% (14/15)    IGHD6-19*01  1    ---------------------........C......------------------------------------------------------  15
J  94.6% (53/56)    IGHJ6*02     7    -----------------------------------------..........C...A................A.................  55

                                             
                                        S  S 
                    Query_961    361  CTCCTCA  367
J  94.6% (53/56)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_277181

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           297     7e-83
IGHD3-10*01                                                                                           14.1    8.3  
IGHJ3*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAATACTC	CTATGGT	AACAGGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAATACTCCTATGGTAACAGGGGCTTTTGATATT	ARENTPMVTGAFDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  R  D  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_962    1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTCAGAGATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  88.0% (220/250)  IGHV3-48*03  47   .....................C.....................TAG.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  S  I  S  R  F  G  D  T  I  N  Y  A  D  S  V  K  G  R  F  T  S  S  R  D  Y  S  
                    Query_962    91   AGTGGCTTTCATCTATTAGTCGCTTTGGGGACACCATAAATTATGCAGACTCTGTGAAGGGCCGATTCACCAGCTCCAGAGACTACAGCA  180
V  88.0% (220/250)  IGHV3-48*03  137  .....G......AC......A.TAG...TAGT......T.C..C............................T..........A..GC..  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  N  L  V  Y  L  Q  M  D  G  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  N  T  P  M  V  T  
                    Query_962    181  GGAACTTAGTCTATCTGCAAATGGACGGCCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGCGAGAGAGAATACTCCTATGGTAACAG  270
V  88.0% (220/250)  IGHV3-48*03  227  A.....C.C.G............A..A.......................G...................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-10*01  7    ------------------------------------------------------------------------------.......-----  13

                                      ------------->                               
                                      G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  
                    Query_962    271  GGGCTTTTGATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTT  315
J  97.7% (42/43)    IGHJ3*02     5    --...........C...............................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_277186

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           311     4e-87
IGHD3-10*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGG	CCGAAGGTACCT	TGGGTCGGGGAG	ATTTATACCGTTTTCG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCGAAGGTACCTTGGGTCGGGGAGATTTATACCGTTTTCGGACTAT	ARGRRYLGSGRFIPFSDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  E  V  Y  G  G  S  F  N  N  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_963    1    ACCCTGTCCCTCACCTGCGAAGTCTATGGTGGGTCCTTCAATAATTACTTCTGGAACTGGATCCGCCAGCCCCCAGGAAAGGGTCTGGAG  90
V  90.6% (222/245)  IGHV4-34*01  49   ...................CT...................G.GG.....A.....G.....................G.....G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  V  S  H  S  G  N  T  N  Y  N  L  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_963    91   TGGATTGGGGAAGTCAGTCATAGTGGCAACACCAACTACAACCTGTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-34*01  139  ............A...A.........A.G..............C............................G.................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  Y  S  L  N  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  Y  L  G  S  G  R 
                    Query_963    181  CAGTACTCCCTGAACCTGGCTTCTGTGACCGCCGCGGACACGGCTGTCTACTACTGTGCGAGGGGCCGAAGGTACCTTGGGTCGGGGAGA  270
V  90.6% (222/245)  IGHV4-34*01  229  ....T.........G...AGC..........................G..T...........A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  91.7% (11/12)    IGHD3-10*01  10   -----------------------------------------------------------------------------...T........-  21

                                      -------------------->                                  
                                       F  I  P  F  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_963    271  TTTATACCGTTTTCGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.5% (39/40)    IGHJ4*02     9    ---------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_277184

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           338     5e-95
IGHD2-21*02                                                                                           25.7    0.003
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTTGAGGACACCTCTA	ATTGTGCTGGTGACTG	TTTAATGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGATGTTGAGGACACCTCTAATTGTGCTGGTGACTGTTTAATGTACTACTTTGACTCC	AKDVEDTSNCAGDCLMYYFDS	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  S  Y  G  I  R  W  V  R  Q  A  P  G  K  G  L  
                    Query_964    1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTCAGTAGTTACGGCATTCGCTGGGTCCGCCAGGCTCCGGGCAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-30*18  47   .....................C........................C..T.....G.A..................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  H  D  G  S  K  K  Y  Y  T  D  S  V  K  G  R  F  T  T  S  R  D  N  S  
                    Query_964    91   AATGGGTGGCAGTTATATCACATGATGGAAGTAAGAAATACTATACTGACTCCGTGAAGGGCCGATTCACCACCTCCCGAGACAACTCCA  180
V  93.2% (233/250)  IGHV3-30*18  137  .G..................T.............T.........G.A.........................T....A.......T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  V  E  D  T  S  N  
                    Query_964    181  AGAACACTCTGTATCTCCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCCAAAGATGTTGAGGACACCTCTAATT  270
V  93.2% (233/250)  IGHV3-30*18  227  .......G........G...............................................G.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD2-21*02  6    ---------------------------------------------------------------------------------------...  8

                                      DR3-IMGT-------------------------->                                  
                                      C  A  G  D  C  L  M  Y  Y  F  D  S  W  G  Q  G  I  R  V  T  V  S  S  
                    Query_964    271  GTGCTGGTGACTGTTTAATGTACTACTTTGACTCCTGGGGCCAGGGAATCCGGGTCACCGTCTCCTCAG  339
D  93.8% (15/16)    IGHD2-21*02  9    ...G.........--------------------------------------------------------  21
J  93.8% (45/48)    IGHJ4*02     1    ---------------------............A..............C..T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_277188

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            319     2e-89
IGHD3-10*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACACTCACCG	ATTACTTTGGCTCGGGGA	ACTATAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACACTCACCGATTACTTTGGCTCGGGGAACTATATTACTACTACGGTTTGGATGTC	ARDDTHRLLWLGELYYYYGLDV	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	123	24	23	1	0	95.8
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	232	218	14	0	94


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  I  S  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  
                    Query_965    14   GTGCAGCCTCTGGATTCACCATTAGTAGTTATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAA  103
V  94.0% (218/232)  IGHV3-7*03   65   ....................T.......C..........G..................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      K  Q  D  G  S  E  K  F  H  A  D  S  V  K  G  R  F  T  I  F  R  D  N  A  K  N  S  V  Y  L  
                    Query_965    104  AACAAGATGGAAGTGAGAAATTTCATGCGGACTCTGTGAAGGGCCGATTCACCATCTTCAGAGACAACGCCAAGAACTCAGTGTATCTGC  193
V  94.0% (218/232)  IGHV3-7*03   155  .G...................ACT...T.............................C......................C.........  244
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------------------CDR3-IMGT--------
                                      Q  M  Y  G  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  D  T  H  R  L  L  W  L  G  E  L  Y  
                    Query_965    194  AAATGTACGGCCTGAGAGCCGAAGACACGGCCGTCTATTACTGTGCGAGAGATGACACTCACCGATTACTTTGGCTCGGGGAACTATATT  283
V  94.0% (218/232)  IGHV3-7*03   245  .....A..A.............G...........G.................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  88.9% (16/18)    IGHD3-10*01  3    ----------------------------------------------------------------......A...T.......--------  20
J  94.4% (51/54)    IGHJ6*02     9    -----------------------------------------------------------------------------------------.  9

                                      ------------------->                                 
                                      Y  Y  Y  G  L  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_965    284  ACTACTACGGTTTGGATGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  336
J  94.4% (51/54)    IGHJ6*02     10   ...........A....C..........A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_277189

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           422     2e-120
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	CTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_966    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  96.6% (280/290)  IGHV5-51*01  6    ..................................................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_966    91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  96.6% (280/290)  IGHV5-51*01  96   ......................A.......G.............G..........................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  A  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_966    181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGCCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.6% (280/290)  IGHV5-51*01  186  ....................C...................AT...........A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_966    271  CATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  96.6% (280/290)  IGHV5-51*01  276  ....................---------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (15/15)   IGHD6-19*01  4    ----------------------------------...............----------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   ----------------------------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_11264

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           349     2e-98
IGHD5-12*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CCA	ATATAGTGGC	CCCCAGATCC	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGCCAATATAGTGGCCCCCAGATCCGCTTTCGATATC	GKANIVAPRSAFDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  A  M  T  W  V  R  Q  V  P  G  K  G  L  
                    Query_967    1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAGCAACTATGCCATGACCTGGGTCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-23*01  47   .....................C.......................G...........G..............C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  Q  S  A  Y  Y  A  D  S  V  K  G  R  F  T  M  S  R  D  N  S  
                    Query_967    91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTCAAAGTGCATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATGTCCAGAGACAATTCCA  180
V  94.8% (236/249)  IGHV3-23*01  137  .............................GGT..CA.....................................C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  M  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  G  K  A  N  I  V  A  P  R  
                    Query_967    181  AGAACACGATGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGGGAAAGCCAATATAGTGGCCCCCAGAT  270
V  94.8% (236/249)  IGHV3-23*01  227  ........C.........................................G............C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD5-12*01  5    ------------------------------------------------------------------------..........--------  14

                                      ------------->                                  
                                      S  A  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_967    271  CCGCTTTCGATATCTGGGGCCAAGGGACACTGGTTACCGTCTCTTCAG  318
J  93.5% (43/46)    IGHJ3*02     5    --.....T.....................A....C.............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_86298

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*09                                                                                           350     9e-99
IGHD6-19*01                                                                                           10.3    132  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*09	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GGGTCTTCCCGAGCGGGCT	CAGTG	AAT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGGGGTCTTCCCGAGCGGGCTCAGTGAATCC	AGGVFPSGLSES	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	257	33	0	88.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  S  S  S  I  Y
                    Query_968    1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGGCAGTTCCAGCATCTA  90
V  88.6% (257/290)  IGHV1-69*09  6    ..................G...............................................T..........CC.T.....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  T  W  F  R  Q  A  P  G  Q  G  L  E  W  M  G  N  V  V  P  L  F  S  I  P  T  Y  A  Q
                    Query_968    91   TGTTATCACCTGGTTCCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGAACGTCGTCCCTTTGTTTAGTATACCAACCTACGCACA  180
V  88.6% (257/290)  IGHV1-69*09  96   ..C.....G....G.G...................................A.GGA..A.....A.CC..G.....G...A.........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  I  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  V  Q  G  R  I  T  I  T  A  D  T  S  T  S  T  A  Y  M  E  L  S  S  L  T  S  D  D  T  A
                    Query_968    181  GAAGGTCCAAGGCAGAATCACGATTACCGCGGACACATCCACGAGCACGGCGTACATGGAACTGAGCAGCCTGACATCTGACGACACGGC  270
V  88.6% (257/290)  IGHV1-69*09  186  ....T....G......G..................A............A..C........G.............G......G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  G  G  V  F  P  S  G  L  S  E  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_968    271  CGTCTATTATTGTGCGGGAGGGGTCTTCCCGAGCGGGCTCAGTGAATCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  88.6% (257/290)  IGHV1-69*09  276  ...G.....C......A...---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  100.0% (5/5)     IGHD6-19*01  9    ---------------------------------------.....---------------------------------------  13
J  100.0% (36/36)   IGHJ5*02     16   -----------------------------------------------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_289094

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           350     8e-99
IGHD2-21*01                                                                                           12.2    33   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTTCTTTGGCGATTTCGA	CTATTC	GGGCCCCCTATCCACCCCACA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTCTTTGGCGATTTCGACTATTCGGGCCCCCTATCCACCCCACAAC	ARLSLAISTIRAPYPPHN	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  A  S  I  S  G  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_969    1    ACCCTGTCCCTCACCTGCTCTGTTTCTGGTGCCTCCATCAGTGGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  94.8% (237/250)  IGHV4-39*01  49   ..................A....C.......G.........CA..............................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S 
                    Query_969    91   CTGGAGTGGATAGGGACTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGGGTCGAGTCACCATATCCGTAGACACGTCC  180
V  94.8% (237/250)  IGHV4-39*01  139  ...........T....G...........................................A.............................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  D  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  S  L  A  I  S  T 
                    Query_969    181  AAGGACCAGTTCTCCCTGAAACTGAACTCTGTGACCGCCGCAGACACGGCTCTGTATTACTGTGCGAGACTTTCTTTGGCGATTTCGACT  270
V  94.8% (237/250)  IGHV4-39*01  229  ...A................G....G.........................G..................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-21*01  22   ----------------------------------------------------------------------------------------..  23

                                      -IMGT--------------------->                                  
                                       I  R  A  P  Y  P  P  H  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_969    271  ATTCGGGCCCCCTATCCACCCCACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  100.0% (6/6)     IGHD2-21*01  24   ....---------------------------------------------------------  27
J  100.0% (36/36)   IGHJ4*02     13   -------------------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_289096

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           439     2e-125
IGHD4-17*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGG	CTACGGTGACTAC	GACGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGCTACGGTGACTACGACGGGCTTGACTAC	ASGYGDYDGLDY	286	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	72	71	70	1	0	98.6
CDR1-IMGT	73	96	24	24	0	0	100
FR2-IMGT	97	147	51	51	0	0	100
CDR2-IMGT	148	171	24	23	1	0	95.8
FR3-IMGT	172	285	114	112	2	0	98.2
CDR3-IMGT (germline)	286	290	5	5	0	0	100
Total	N/A	N/A	289	285	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  
                    Query_970    2    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCT  91
V  98.6% (285/289)  IGHV1-69*01  5    ...................G......................................................................  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  V  N  Y  A  
                    Query_970    92   ATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGTAAACTACGCAC  181
V  98.6% (285/289)  IGHV1-69*01  95   ..............................................................................C...........  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  R  V  T  I  I  A  D  E  S  T  S  I  A  Y  M  E  L  S  S  L  R  S  E  D  T  
                    Query_970    182  AGAAGTTCCAGGGCAGAGTCACGATTATCGCGGACGAATCCACGAGCATAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGG  271
V  98.6% (285/289)  IGHV1-69*01  185  ...........................C....................C.........................................  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-------------CDR3-IMGT------------>                                  
                                      A  V  Y  Y  C  A  S  G  Y  G  D  Y  D  G  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_970    272  CCGTGTATTACTGTGCGAGCGGCTACGGTGACTACGACGGGCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  355
V  98.6% (285/289)  IGHV1-69*01  275  ...................-----------------------------------------------------------------  293
                                      A  V  Y  Y  C  A                                                                    
D  100.0% (13/13)   IGHD4-17*01  4    ----------------------.............-------------------------------------------------  16
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_289091

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD5-18*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGCCATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGCCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	240	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_971    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGAAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAAAGACTGGAG  90
V  98.8% (240/243)  IGHV4-59*01  49   .........................................T......................................GG........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_971    91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (240/243)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D 
                    Query_971    181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGCCATGGTTACGGAGGAGTTGAC  270
V  98.8% (240/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD5-18*01  6    ---------------------------------------------------------------......T........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_971    271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_289090

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            311     5e-87
IGHD3-10*01                                                                                           12.2    34   
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	GGGACACCCAGAGATGGCGCAGTCAC	TTCGGG	AAGGAAGCGGTCCTCATCCCGGGGGCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGGGACACCCAGAGATGGCGCAGTCACTTCGGGAAGGAAGCGGTCCTCATCCCGGGGGCCTC	VRGHPEMAQSLREGSGPHPGGL	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	223	24	0	90.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  N  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_972    1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACATTCAGTAACTATGCTATGCACTGGGTCCGCCAGGCTCCTGGGAAGGGACTGG  90
V  90.3% (223/247)  IGHV3-7*03   47   ....................G................C..T....G....TGG...AG..................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  G  N  I  K  Q  D  G  G  D  K  Y  Y  L  G  S  V  K  G  R  F  T  I  S  R  D  N  V  
                    Query_972    91   AGTGGGTGGGCAACATAAAGCAAGATGGAGGTGACAAATACTATTTGGGCTCTGTGAAGGGCCGATTCACCATATCCAGAGACAACGTCA  180
V  90.3% (223/247)  IGHV3-7*03   137  .........C...................A....G.........G...A........................C.............C..  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      N  N  S  L  Y  L  Q  M  N  N  V  R  A  E  D  T  A  V  Y  Y  C  V  R  G  H  P  E  M  A  Q  
                    Query_972    181  ACAACTCACTGTATCTGCAAATGAACAACGTGAGAGCCGAGGACACGGCCGTCTATTACTGCGTGAGGGGACACCCAGAGATGGCGCAGT  270
V  90.3% (223/247)  IGHV3-7*03   227  .G.........................G.C......................G........T.C...-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      -CDR3-IMGT--------------------------->                                  
                                      S  L  R  E  G  S  G  P  H  P  G  G  L  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_972    271  CACTTCGGGAAGGAAGCGGTCCTCATCCCGGGGGCCTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  342
D  100.0% (6/6)     IGHD3-10*01  13   ---......---------------------------------------------------------------  18
J  97.1% (34/35)    IGHJ4*02     14   -------------------------------------......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_289093

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           335     4e-94
IGHD3-10*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGGTTCGAGCAGTTATT	CCTTCGCGCG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTTCGAGCAGTTATTCCTTCGCGCGCTACGGTATGGACGTC	ARDGSSSYSFARYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  S  F  S  T  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_973    1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCTCTTTCAGTACTTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-48*03  47   ....................G..............A.C.......G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  G  G  G  R  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_973    91   AGTGGGTTTCATACATTAGTGGCGGTGGACGTACCATTTACTACGCAGACTCTGTGAAGGGCCGATTCACCATATCCAGAGACAACGCCA  180
V  92.8% (232/250)  IGHV3-48*03  137  ....................A.TA....TA.......A...................................C................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  T  A  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  S  S  Y  S  
                    Query_973    181  AGACCGCTCTGCATCTACAAATGAACAGCCTGAGAGCCGAAGACACGGCTGTTTATTACTGTGCGAGAGATGGTTCGAGCAGTTATTCCT  270
V  92.8% (232/250)  IGHV3-48*03  227  ...A.T.A...T....G.......................G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.2% (15/17)    IGHD3-10*01  10   ----------------------------------------------------------------------.......G.G.......---  26

                                      GT-------------------->                                 
                                      F  A  R  Y  G  M  D  V  W  S  Q  G  T  T  V  I  V  S  S 
                    Query_973    271  TCGCGCGCTACGGTATGGACGTCTGGAGCCAAGGGACCACGGTCATCGTCTCCTCA  326
J  95.9% (47/49)    IGHJ6*02     14   -------...................G..................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_289099

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           316     2e-88
IGHD3-16*01                                                                                           12.2    32   
IGHJ2*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGGCG	TGGGGG	CATCAAGGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGGCGTGGGGGCATCAAGGGATCCTGGTACTCCGATCTC	ARVRRGGIKGSWYSDL	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	126	24	17	7	0	70.8
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	246	224	22	0	91.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  V  A  S  G  F  T  F  S  R  H  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_974    2    CCCTGTCCCTCACCTGTGTAGCCTCTGGATTCACCTTCAGTAGACATGAGATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  91.1% (224/246)  IGHV3-48*03  50   .....AGA...T......C........................TT....A.....C..................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  H  I  S  T  G  S  T  L  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  E  
                    Query_974    92   GGGTTTCACACATTAGTACTGGTAGTACTCTTATAAACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCGAGA  181
V  91.1% (224/246)  IGHV3-48*03  140  ........T.........G.A..G...G.ACC...T..................................................A...  229
                                      W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  L  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  V  R  R  G  G  I  K  G  
                    Query_974    182  ATTTACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGAGAGTCCGGCGTGGGGGCATCAAGGGAT  271
V  91.1% (224/246)  IGHV3-48*03  230  .C.C...........................................G..................------------------------  295
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (6/6)     IGHD3-16*01  17   -------------------------------------------------------------------------......-----------  22

                                      ---------------->                                  
                                      S  W  Y  S  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_974    272  CCTGGTACTCCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  322
J  98.0% (49/50)    IGHJ2*01     4    -........T.........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_289098

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD3-22*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTTTG	ACTATGATAGTAGTGGT	ACTTACCACGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTTGACTATGATAGTAGTGGTACTTACCACGTTTTTGACTAC	ARFDYDSSGTYHVFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	235	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_975    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (235/242)  IGHV4-59*01  49   ..............................................A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  N 
                    Query_975    91   TGGATTGGATATATCTATTACAGTGGCAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCCAGGAAC  180
V  97.1% (235/242)  IGHV4-59*01  139  ........G.................G..C..........................................G............A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  D  Y  D  S  S  G  T  Y 
                    Query_975    181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTTTGACTATGATAGTAGTGGTACTTAC  270
V  97.1% (235/242)  IGHV4-59*01  229  ....................C.........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (17/17)   IGHD3-22*01  6    -------------------------------------------------------------------.................------  22

                                      -------------->                                  
                                       H  V  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_975    271  CACGTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_92917

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTGTACGAGGCGACTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATGTGTACGAGGCGACTCATCAATATAGTGGCTACATGATTAATGACTAC	GKDVYEATHQYSGYMINDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_976    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAAGTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  E  S  G  A  S  T  N  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_976    91   AATGGGTCTCAGGTATCAGTGAGAGCGGTGCTAGCACAAATCACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  .G..........C...T....GT..T....G.......T.CT................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  I  S  L  R  V  E  D  T  A  V  Y  Y  C  G  K  D  V  Y  E  A  T  H  
                    Query_976    181  AGAACACGCTGTATCTGCAAATGATCAGCCTGAGAGTCGAGGACACGGCCGTATATTACTGTGGGAAAGATGTGTACGAGGCGACTCATC  270
V  94.0% (235/250)  IGHV3-23*01  227  ........................A...........C..........................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_976    271  AATATAGTGGCTACATGATTAATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_92916

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            339     1e-95
IGHD3-10*01                                                                                           10.3    116  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GA	TCGGG	ATGGCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGATCGGGATGGCTCCCTGACTAC	VGGSGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_977    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGTGACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-7*01   47   ....................................C.......AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  E  K  D  G  S  E  K  N  Y  V  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_977    91   AGTGGGTGGCCAACATTGAGAAAGATGGAAGTGAGAAAAACTATGTGGACTCTCTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.6% (233/249)  IGHV3-7*01   137  ................AA..C.................T..............G....................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  A  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  V  G  G  S  G  W  L  P  D  
                    Query_977    181  AGAACGCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTGTATATTACTGTGTGGGAGGATCGGGATGGCTCCCTGACT  270
V  93.6% (233/249)  IGHV3-7*01   227  .....T.............A...A............C...............G..........C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   -----------------------------------------------------------------------.....--------------  18
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_977    271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_92915

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           388     5e-110
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACAGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	267	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  H  S  F  T  T  Y
                    Query_978    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGACACAGCTTTACCACCTA  90
V  93.4% (267/286)  IGHV5-51*01  6    ..............................A...................................T......T............G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  Q  G  L  E  L  M  G  L  I  Y  P  G  D  S  D  T  W  Y  S  P
                    Query_978    91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCAAGGCCTGGAGTTGATGGGGCTCATCTATCCTGGTGACTCTGATACCTGGTACAGTCC  180
V  93.4% (267/286)  IGHV5-51*01  96   ......................A........A............G.......A..........................A.A.....C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  T  S  A  Y  L  Q  W  T  T  L  K  A  S  D  T  A
                    Query_978    181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCACCTCCGCCTACCTGCAGTGGACCACCCTGAAGGCCTCGGACACCGC  270
V  93.4% (267/286)  IGHV5-51*01  186  ....................C...................A...G.A..................G..G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_978    271  CATTTACTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACAGACTACTGGGGCCAGGGGACCCTTGTCACCGTCTCCTCAG  353
V  93.4% (267/286)  IGHV5-51*01  276  ...G..T.........-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  95.0% (38/40)    IGHJ4*02     9    -------------------------------------------.................A.....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_92914

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           394     7e-112
IGHD4-17*01                                                                                           18.0    0.67  
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAG	CTACGGTGA	GTCCGAGTAGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTATGGACGTC	ARDLATVSPSSFYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  S  S  Y 
                    Query_979    2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCCTCTGGTTACACCTTTAGTAGTTAT  91
V  93.4% (271/290)  IGHV1-18*01  7    ...............................................................G.T................CC..C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  R  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_979    92   GGTATCACCTGGGTGCGGCAGGCCCCTGGACAGGGGCTTAGGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  181
V  93.4% (271/290)  IGHV1-18*01  97   .......G.........A..............A......GA........................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_979    182  ATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  93.4% (271/290)  IGHV1-18*01  187  .A.C...A..G.................C....................C..........C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  S  F  Y  Y  G  M  D  V  W  G  Q  G  A  T  A  T 
                    Query_979    272  GTGTATTACTGTGCGAGAGATTTAGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTATGGACGTCTGGGGCCAAGGGGCCACGGCCACC  361
V  93.4% (271/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------.........--------------------------------------------------------  12
J  96.2% (50/52)    IGHJ6*02     11   -----------------------------------------------...............................A......T....  53

                                               
                                       V  S  S 
                    Query_979    362  GTCTCCTCA  370
J  96.2% (50/52)    IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_76825

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           300     9e-84
IGHD3-10*01                                                                                           18.0    0.60 
IGHJ1*01                                                                                              37.2    2e-06


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGAAACCCCCGA	ACTGTGGTTCGG	CCCCTTATCTAACCTTGACTTG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGAAACCCCCGAACTGTGGTTCGGCCCCTTATCTAACCTTGACTTG	ARDETPELWFGPLSNLDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  T  K  T  W  V  R  L  A  P  R  K  G  L  
                    Query_980    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTTCCTATACCAAGACCTGGGTCCGCCTGGCTCCACGGAAGGGGCTGG  90
V  88.4% (221/250)  IGHV3-21*01  47   .....................................C......AG.....G..T..A...........A.......G............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  K  T  T  T  Y  E  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_980    91   AGTGGGTTTCATCTATTAGTAAAACTACTACTTATGAAGACTACGCAGACTCTGTGAAGGGGCGATTCACCATCTCCAGAGACAACGCCA  180
V  88.4% (221/250)  IGHV3-21*01  137  .......C.....C.......GT.G..G..G...CAT.T.............A........C............................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  D  E  T  P  E  L  W  
                    Query_980    181  AGAATTCTCTCTTTCTACAAATGAACAGCCTGAGGGCCGAGGACACGGCTGTTTATTTCTGTGCGAGAGACGAAACCCCCGAACTGTGGT  270
V  88.4% (221/250)  IGHV3-21*01  227  ....C..A..G.A...G.................A.................G....A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD3-10*01  6    ----------------------------------------------------------------------------------...A....  13

                                      IMGT--------------------->                                  
                                      F  G  P  L  S  N  L  D  L  W  G  Q  G  T  L  L  I  V  S  S  
                    Query_980    271  TCGGCCCCTTATCTAACCTTGACTTGTGGGGCCAGGGCACCCTCCTAATTGTCTCCTCAG  330
D  91.7% (11/12)    IGHD3-10*01  14   ....--------------------------------------------------------  17
J  85.3% (29/34)    IGHJ1*01     19   --------------------------.................GG.C.CC..........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_92911

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           321     6e-90
IGHD4-17*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGAACA	ACTACGGTGAC	CCAC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGAACAACTACGGTGACCCACACTTTGACTCC	ARWNNYGDPHFDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  I  N  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_981    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCATTAATTACTCCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.2% (224/243)  IGHV4-59*01  49   ........................................G..G.....A........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  H  H  S  G  S  T  D  Y  D  P  S  L  K  G  R  V  I  I  S  T  Y  T  P  K  N 
                    Query_981    91   TGGATTGGGTATTTCCACCACAGTGGGAGCACCGACTACGACCCCTCCCTCAAGGGTCGAGTCATCATATCAACATACACGCCCAAGAAC  180
V  92.2% (224/243)  IGHV4-59*01  139  ............A..T.TT..............A.....A..............A.........C.......GT.G.....T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  H  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  W  N  N  Y  G  D  P  H  F 
                    Query_981    181  CAGTTTTCCCTGAAGCTGCACTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGATGGAACAACTACGGTGACCCACACTTT  270
V  92.2% (224/243)  IGHV4-59*01  229  .....C............AG.................................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (11/11)   IGHD4-17*01  3    ----------------------------------------------------------------------...........---------  13
J  91.1% (41/45)    IGHJ4*02     4    -------------------------------------------------------------------------------------.....  8

                                      ----->                                  
                                       D  S  W  G  Q  G  A  L  V  V  V  S  S  
                    Query_981    271  GACTCCTGGGGCCAGGGAGCCCTGGTCGTCGTCTCCTCAG  310
J  91.1% (41/45)    IGHJ4*02     9    ....A.............A........AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_76826

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           321     6e-90
IGHD6-13*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GAA	CAGCTGG	GGAATC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGAACAGCTGGGGAATCGACTAC	ARNSWGIDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  H  Y  G  V  H  W  V  R  Q  A  P  A  K  G  L  
                    Query_982    1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTCACTATGGGGTGCACTGGGTCCGCCAGGCTCCAGCCAAGGGGCTGG  90
V  91.5% (226/247)  IGHV3-30*03  47   ....................G.......................AG......CA........................G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  T  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_982    91   AGTGGGTGGCACTTATAACATACGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  91.5% (226/247)  IGHV3-30*03  137  ...........G.....T....T...................................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  T  V  Y  L  Q  M  N  S  L  T  V  E  D  S  A  V  Y  Y  C  A  R  N  S  W  G  I  D  Y  
                    Query_982    181  AGAACACGGTGTATCTGCAAATGAATAGTCTAACAGTCGAGGACTCGGCTGTATATTATTGCGCAAGGAACAGCTGGGGAATCGACTACT  270
V  91.5% (226/247)  IGHV3-30*03  227  ........C................C..C..G.G..CT......A.......G.....C..T..G..-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD6-13*01  12   ----------------------------------------------------------------------.......-------------  18
J  95.0% (38/40)    IGHJ4*02     9    -----------------------------------------------------------------------------------.......  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  P  
                    Query_982    271  GGGGCCAGGGAACCCTCGTCACCGTCTCCCCAG  303
J  95.0% (38/40)    IGHJ4*02     16   ................G............T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_76829

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           405     4e-115
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATCCAACGGTC	GTGGGAGCCACT	CTCCCCTTTCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATCCAACGGTCGTGGGAGCCACTCTCCCCTTTCTCTTGACTTT	AKSNGRGSHSPLSLDF	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	273	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  S  G  E  S  L  K  I  S  C  E  A  S  G  Y  S  F  T  N  Y
                    Query_983    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGTCGGGGGAGTCTCTGAAGATCTCCTGTGAGGCTTCTGGGTACAGCTTTACCAATTA  90
V  95.1% (273/287)  IGHV5-51*03  6    ..............................A...C..........................A...G......A.............GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_983    91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGATTCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  95.1% (273/287)  IGHV5-51*03  96   ...................................................GA.....................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  R  S  L  K  A  S  D  P  A
                    Query_983    181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGCGCAGCCTGAAGGCCTCGGACCCCGC  270
V  95.1% (273/287)  IGHV5-51*03  186  ...............G............................G...................A....................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        M  Y  F  C  A  K  S  N  G  R  G  S  H  S  P  L  S  L  D  F  W  G  Q  G  T  L  V  T  V  S
                    Query_983    271  CATGTATTTCTGTGCGAAATCCAACGGTCGTGGGAGCCACTCTCCCCTTTCTCTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTC  360
V  95.1% (273/287)  IGHV5-51*03  276  ........A........-------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                           
D  91.7% (11/12)    IGHD1-26*01  7    -----------------------------........T...-------------------------------------------------  18
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------------------------......AC.............................  43

                                           
                                        S  
                    Query_983    361  CTCAG  365
J  95.2% (40/42)    IGHJ4*02     44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_306848

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           316     2e-88
IGHD1-26*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	AGCA	AGTGGGAGC	CTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAAGCAAGTGGGAGCCTTATGACTCC	ARSKWEPYDS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	22	24	3	3	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	21	3	0	87.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	222	212	10	0	95.5


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  N  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  K  S  D 
                    Query_984    22   TCTGGATTCAACTTCAGTACCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGTATTAAAAGTGAT  111
V  95.5% (212/222)  IGHV3-74*01  73   ..........C........G...............................................................T......  162
                                       S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  N  S  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  S  S  G  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  H  T  N 
                    Query_984    112  GGGAGTAGCGGAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTGCACACGAAC  201
V  95.5% (212/222)  IGHV3-74*01  163  .........AC..G.....................................................................A.T....  252
                                       G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><----------CDR3-IMGT--------->                        
                                       N  L  R  A  E  D  T  A  L  Y  Y  C  A  R  S  K  W  E  P  Y  D  S  W  G  Q  G  T  L  V  T 
                    Query_984    202  AATCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCAAGAAGCAAGTGGGAGCCTTATGACTCCTGGGGCCAGGGAACCCTGGTCACC  291
V  95.5% (212/222)  IGHV3-74*01  253  .G......................G.................------------------------------------------------  294
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  100.0% (9/9)     IGHD1-26*01  6    ----------------------------------------------.........-----------------------------------  14
J  97.6% (40/41)    IGHJ4*02     8    -----------------------------------------------------------.....A.........................  38

                                                
                                       V  S  S  
                    Query_984    292  GTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_11263

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           327     9e-92
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAG	GTCGAGGGAG	TGACTACGGT	AGACT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGGTCGAGGGAGTGACTACGGTAGACTCTACTTTGACTAC	AKGRGSDYGRLYFDY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	101	51	44	4	3	86.3
CDR2-IMGT	102	125	24	19	5	0	79.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	249	231	15	3	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  I  S  W  V  R  R  A  P  G  K  G  L  
                    Query_985    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATGCCATCAGCTGGGTCCGCCGGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-23*01  47   ...........................................C.G.........G.............A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S     M  I  G  G  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_985    91   AATGGATCTCA---ATGATTGGTGGTGGTGGAACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  177
V  92.8% (231/249)  IGHV3-23*01  137  .G...G.....GCT..T.G....A.......T.G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  G  R  G  S  D  Y  G  
                    Query_985    178  AGAACACCCTGTATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCCAAAGGTCGAGGGAGTGACTACGGTA  267
V  92.8% (231/249)  IGHV3-23*01  227  .......G...............A..........................G.............G....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD4-17*01  1    -------------------------------------------------------------------------------..........-  10

                                      ---------------->                                  
                                      R  L  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_985    268  GACTCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (47/47)   IGHJ4*02     2    ----...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_92919

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            329     3e-92
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCTA	TATTACTATGAAAGTAGTGGTT	CAT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCTATATTACTATGAAAGTAGTGGTTCATACTTCTTTGACTAC	ARSLYYYESSGSYFFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	228	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  D  S  I  S  N  S  R  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_986    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCATCAGTAATTCTAGGTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  92.7% (228/246)  IGHV4-4*02   49   ...............................G.........C.G.AG..AC...................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  H  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  K  S  K 
                    Query_986    91   GAGTGGATTGGAGACATCCATCATAGTGGGACCACCAACTACAATCCGTCCCTCAAGAGTCGAGTCACCCTCTCAGTAGACAAGTCCAAG  180
V  92.7% (228/246)  IGHV4-4*02   139  ...........G..A...T............G............C........................A.A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       K  R  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  Y  E  S  S 
                    Query_986    181  AAGCGGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAAGCCTATATTACTATGAAAGTAGT  270
V  92.7% (228/246)  IGHV4-4*02   229  ..C.A.................G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  95.5% (21/22)    IGHD3-22*01  2    ------------------------------------------------------------------------...........T......  19

                                      -------------------->                                  
                                       G  S  Y  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_986    271  GGTTCATACTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  95.5% (21/22)    IGHD3-22*01  20   ....---------------------------------------------------  23
J  97.9% (47/48)    IGHJ4*02     1    -------...A............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_92918

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           265     5e-73
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTCGCCAA	ATTACGATTTCTGGAATGGTTTTTA	CATTACCAAAAAAGGA	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCGCCAAATTACGATTTCTGGAATGGTTTTTACATTACCAAAAAAGGAGCTTTTGATATC	ARESPNYDFWNGFYITKKGAFDI	225	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	98	51	43	2	6	84.3
CDR2-IMGT	99	110	21	10	2	9	47.6
FR3-IMGT	111	224	114	101	13	0	88.6
CDR3-IMGT (germline)	225	232	8	8	0	0	100
Total	N/A	N/A	247	210	22	15	85


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  N  F  N  H  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_987    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAATTTTAACCACATTAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  85.0% (210/247)  IGHV3-53*01  47   ..........................................G.AGC...T....G.G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V                 G  D  N  T  A  Y  A  E  S  V  R  G  R  F  T  I  S  R  D  N  S  M  
                    Query_987    91   AGTGGGTC---------------GGTGATAACACAGCCTATGCAGAGTCCGTGAGGGGCCGATTCACTATCTCCAGAGACAATTCCATGA  165
V  85.0% (210/247)  IGHV3-53*01  137  ........TCAGTTATTTATAGC....G..G....TA...C.....C.......A............C...................A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------------C
                                      N  T  V  F  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R  E  S  P  N  Y  D  F  W  
                    Query_987    166  ACACGGTGTTTCTTCAAATGAACAGCCTGAGAGCCGGGGACACGGCCGTTTACTATTGTGCGAGAGAGTCGCCAAATTACGATTTCTGGA  255
V  85.0% (210/247)  IGHV3-53*01  227  .....C...A..........................A............G..T..C...........-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  88.0% (22/25)    IGHD3-3*01   3    ---------------------------------------------------------------------------..........T....  17

                                      DR3-IMGT----------------------------->                                  
                                      N  G  F  Y  I  T  K  K  G  A  F  D  I  W  G  Q  G  T  V  V  I  V  S  S  
                    Query_987    256  ATGGTTTTTACATTACCAAAAAAGGAGCTTTTGATATCTGGGGCCAGGGGACAGTGGTCATCGTCTCTTCAG  327
D  88.0% (22/25)    IGHD3-3*01   18   G.....A...--------------------------------------------------------------  27
J  93.5% (43/46)    IGHJ3*02     5    --------------------------....................A......A......C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_142424

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           366     2e-103
IGHD1-1*01                                                                                            12.2    32    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTAC	AEEKRRVPRGTFHY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_988    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-23*01  47   ................................T.........G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  
                    Query_988    91   AGTGGGTCTCAGCCATTAGTGGTGGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGA  180
V  96.8% (242/250)  IGHV3-23*01  137  .............T.........A......................................................G.........C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  
                    Query_988    181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGG  270
V  96.8% (242/250)  IGHV3-23*01  227  .................................................................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------------------------......------------  17

                                      ------------->                                  
                                      G  T  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_988    271  GAACCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (43/44)    IGHJ4*02     5    ----....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_304271

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-66*04                                                                                           280     1e-77
IGHD3-10*02                                                                                           10.3    116  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-66*04	IGHD3-10*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	GGAGATGGCCTCA	ATGTT	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAGGAGATGGCCTCAATGTTCTTTGACTAC	VRQEMASMFFDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	96	18	0	84.2
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	247	213	34	0	86.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  L  K  V  S  I  N  D  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_989    1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTAAAAGTCAGTATAAATGACATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  86.2% (213/247)  IGHV3-66*04  47   ....................G.............C.CC.......GC..CT.......C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  A  L  I  Y  S  D  G  R  T  H  Y  A  D  S  V  K  G  R  I  T  L  S  R  D  T  S  K  
                    Query_989    91   AGTGGGTCGCACTTATCTATAGCGATGGCAGAACACACTACGCAGACTCCGTCAAGGGCCGAATCACCCTCTCCAGAGACACGTCCAAGA  180
V  86.2% (213/247)  IGHV3-66*04  137  ........T..G....T.......G...T..C...T................G......A..T.....A............AT.......  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  L  Y  Y  C  V  R  Q  E  M  A  S  M  F  F  
                    Query_989    181  ACACCTTATATCTTCAAATGAACAGCCTGCGAGTCGACGACACTGCCCTATATTATTGTGTGAGACAGGAGATGGCCTCAATGTTCTTTG  270
V  86.2% (213/247)  IGHV3-66*04  227  ....GC.G.....................A...C...G.....G..TG.G.....C....C......-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (5/5)     IGHD3-10*02  9    --------------------------------------------------------------------------------.....-----  13
J  100.0% (44/44)   IGHJ4*02     5    -------------------------------------------------------------------------------------.....  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_989    271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (44/44)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_142426

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_990    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_990    91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_990    181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_990    271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_142427

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            335     4e-94
IGHD6-25*01                                                                                           10.3    116  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	GGCT	CAGCG	ACAAAACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCAGCGACAAAACCACTTTGACTTC	AAQRQNHFDF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  S  D  Y  G  M  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_991    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTAGTGATTATGGCATGCAGTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  93.9% (229/244)  IGHV3-9*01   47   ................................T........GA........C......C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  S  N  S  G  N  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_991    91   AGTGGGTCTCAGGTATTAGTTCGAATAGTGGTAATACAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.9% (229/244)  IGHV3-9*01   137  .....................G...........GC.T.....................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  G  E  D  S  A  L  Y  Y  C  A  A  Q  R  Q  N  H  F  D  
                    Query_991    181  AGAAGTCCCTGTATCTACAAATGAACAGTTTGAGAGGTGAGGACTCGGCCTTATATTACTGTGCGGCTCAGCGACAAAACCACTTTGACT  270
V  93.9% (229/244)  IGHV3-9*01   227  ....C...........G............C......C.......A.......G...........--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (5/5)     IGHD6-25*01  9    --------------------------------------------------------------------.....-----------------  13
J  93.3% (42/45)    IGHJ4*02     4    ---------------------------------------------------------------------------------.........  12

                                      ->                                  
                                      F  W  G  L  G  T  L  V  T  V  S  S  
                    Query_991    271  TCTGGGGCCTGGGAACTCTGGTCACCGTCTCCTCAG  306
J  93.3% (42/45)    IGHJ4*02     13   A........A......C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_142420

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            293     2e-81
IGHD4-17*01                                                                                           14.1    8.7  
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TGGGCCTCAGGGCACTC	ACTACGG	GATGTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGGGCCTCAGGGCACTCACTACGGGATGTCCTACTTCTACGGATTGGACGTC	ASGPQGTHYGMSYFYGLDV	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	18	9	0	66.7
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	216	29	0	88.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  V  V  S  G  G  S  I  S  S  D  R  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_992    1    ACCCTGTCCCTCACCTGCGTTGTGTCTGGTGGCTCCATCAGTTCCGACAGGTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  88.2% (216/245)  IGHV4-4*02   49   ...................C...C.................CAGTAGT.AC.......G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  V  G  E  V  Y  H  T  G  S  A  N  S  K  P  S  L  E  S  R  V  T  L  S  V  D  K  S  R 
                    Query_992    91   GAGTGGGTTGGGGAAGTCTATCATACTGGGAGCGCCAACTCCAAGCCGTCCCTCGAGAGTCGAGTCACCTTGTCAGTAGACAAGTCCAGG  180
V  88.2% (216/245)  IGHV4-4*02   139  ......A........A.........G.......A......A...C.........A..............A.A................A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       N  T  F  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  G  P  Q  G  T  H  Y  G 
                    Query_992    181  AACACCTTTTCCCTGAGCCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGTGGGCCTCAGGGCACTCACTACGGG  270
V  88.2% (216/245)  IGHV4-4*02   229  ...CAG..C.......AG.....C.........................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  3    ----------------------------------------------------------------------------------.......-  9

                                      MGT----------------------->                                 
                                       M  S  Y  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_992    271  ATGTCCTACTTCTACGGATTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
J  94.5% (52/55)    IGHJ6*02     8    -----.....A......TA.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_142421

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            341     5e-96
IGHD5-12*01                                                                                           12.2    30   
IGHJ5*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GAGCGGG	GTGGCT	CCCTGCCT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGAGCGGGGTGGCTCCCTGCCTCC	VGGAGWLPAS	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	29	28	28	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  E
                    Query_993    2    GTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGTGACTACTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGA  91
V  94.0% (233/248)  IGHV3-7*01   48   ...................................C.......AG...T.......G.................................  137
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E

                                      ------------><-------CDR2-IMGT------><----------------------------------------------------
                                        W  V  A  I  I  K  K  D  G  S  E  K  K  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K
                    Query_993    92   GTGGGTGGCCATCATAAAGAAAGATGGAAGTGAGAAAAAGTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAA  181
V  94.0% (233/248)  IGHV3-7*01   138  ...........A.......C.................T.C..................................................  227
                                        W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K

                                      FR3-IMGT----------------------------------------------------><----------CDR3-IMGT---------
                                        D  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  V  G  G  A  G  W  L  P  A  S
                    Query_993    182  GGACTCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGTGGGAGGAGCGGGGTGGCTCCCTGCCTC  271
V  94.0% (233/248)  IGHV3-7*01   228  .A................A...A............C..........................C.A...----------------------  295
                                        N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                        
D  100.0% (6/6)     IGHD5-12*01  10   ---------------------------------------------------------------------------......---------  15
J  97.2% (35/36)    IGHJ5*02     16   -----------------------------------------------------------------------------------------.  16

                                      >                                  
                                        W  G  R  G  T  L  V  T  V  S  S  
                    Query_993    272  CTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.2% (35/36)    IGHJ5*02     17   ........A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_142422

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     2e-95
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCATCA	TATAGCAGTGGCTGG	GT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATCATATAGCAGTGGCTGGGTACTACTTTGACTAC	ARHHIAVAGYYFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  S  Y  S  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_994    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATTCCTATAGTATAAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-21*01  47   ..........................................G.AG......C..G.AC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  S  S  S  S  L  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_994    91   AGTGGGTCTCATTTATCAGTAGTAGTAGTCTTTATATATATTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.9% (232/247)  IGHV3-21*01  137  ............CC..T............AG...C.....C.................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  H  H  I  A  V  A  G  
                    Query_994    181  AGAACTCACTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGCATCATATAGCAGTGGCTGGGT  270
V  93.9% (232/247)  IGHV3-21*01  227  ............A......................................................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (15/15)   IGHD6-19*01  4    -------------------------------------------------------------------------...............--  18

                                      ------------->                                  
                                      Y  Y  F  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_994    271  ACTACTTTGACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  318
J  97.9% (47/48)    IGHJ4*02     1    ..............................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_142423

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           355     3e-100
IGHD3-16*01                                                                                           14.1    9.1   
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	GGGGGA	TTTGGGG	ACTAA	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGCGAGGGGGATTTGGGGACTAATTCGACCCC	TRGGFGD*FDP	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	289	6	4	2	0	66.7
Total	N/A	N/A	289	258	31	0	89.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  V  T  G  H  N  L  S  S  V
                    Query_995    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGTGAGTCTCTGAAGATCTCCTGTAAGGTCACTGGACACAACTTAAGCAGTGT  90
V  89.3% (258/289)  IGHV5-51*01  6    .......................................G.........................GTT.....T...G...T.C...CTA  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  F  I  Y  L  G  D  S  D  T  K  Y  S  P
                    Query_995    91   CTGGATCACCTGGGTGCGCCAGATGCCCGGAAAAGGCCTGGAGTGGATTGGATTCATCTATCTTGGTGACTCTGATACCAAATACAGCCC  180
V  89.3% (258/289)  IGHV5-51*01  96   .......GG.....................G.................G..GA.........C.................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  N  S  I  N  T  A  Y  L  Q  W  S  S  P  K  A  S  D  P  A
                    Query_995    181  GTCCTTTCAAGGCCAGGTCACCATGTCAGCCGACAACTCCATCAACACCGCCTACTTGCAGTGGAGTAGCCCGAAGGCCTCGGACCCCGC  270
V  89.3% (258/289)  IGHV5-51*01  186  ......C.................C...........G.......G..........C..........C....T.............A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        M  Y  F  C  T  R  G  G  F  G  D  *  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_995    271  CATGTATTTTTGTACGCGAGGGGGATTTGGGGACTAATTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  350
V  89.3% (258/289)  IGHV5-51*01  276  ........AC...G..A..-------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                              
D  100.0% (7/7)     IGHD3-16*01  15   -------------------------.......------------------------------------------------  21
J  97.7% (42/43)    IGHJ5*02     9    -------------------------------------.......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_303902

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           268     7e-74
IGHD3-10*01                                                                                           41.1    8e-08
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCTCTA	TATTACTATGGTTCGGGGAACTATTAT	GATTTGATCCTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCTCTATATTACTATGGTTCGGGGAACTATTATGATTTGATCCTTTTTGACTCC	ARVPLYYYGSGNYYDLILFDS	270	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	54	56	3	3	0	0	100
CDR1-IMGT	57	80	24	21	3	0	87.5
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	155	24	18	6	0	75
FR3-IMGT	156	269	114	103	11	0	90.4
CDR3-IMGT (germline)	270	276	7	7	0	0	100
Total	N/A	N/A	223	197	26	0	88.3


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  E  F  T  F  S  T  Y  N  M  A  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  H  N 
                    Query_996    54   TCTGAATTCACCTTCAGTACCTATAACATGGCGTGGGTCCGTCAGGCTCCGGGGAAGGGGCTGGAGTGGGTCTCATCTATTAGTCATAAT  143
V  88.3% (197/223)  IGHV3-21*01  73   ....G..............G.....G....AAC........C........A..........................C......AG..G.  162
                                       S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       S  H  Y  I  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  A  L  Q  M  L 
                    Query_996    144  AGTCATTACATCCATTACGCGGACTCAGTGAAGGGCCGATTCACCATCTCCCGAGACAACGCCAAGAACTCACTGGCTCTGCAGATGCTC  233
V  88.3% (197/223)  IGHV3-21*01  163  ...AG......AT.C.....A..............................A.......................TA......A...AA.  252
                                       S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><--------------------------CDR3-IMGT------------------
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  L  Y  Y  Y  G  S  G  N  Y  Y  D  L  I  L 
                    Query_996    234  AGCCTGAGAGCAGAGGACACGGCTGTCTATTACTGTGCGAGAGTCCCTCTATATTACTATGGTTCGGGGAACTATTATGATTTGATCCTT  323
V  88.3% (197/223)  IGHV3-21*01  253  ...........C..............G................-----------------------------------------------  295
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  92.6% (25/27)    IGHD3-10*01  2    ---------------------------------------------------...................GT......------------  28

                                      -------->                                  
                                       F  D  S  W  G  Q  G  T  T  V  T  V  S  S  
                    Query_996    324  TTTGACTCCTGGGGCCAGGGAACCACGGTCACCGTCTCCTCAG  366
J  93.0% (40/43)    IGHJ4*02     6    .......A................CT.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_142428

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     4e-93
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_997    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  S  L  K  P  R  V  T  I  S  L  D  T  S  K  N 
                    Query_997    91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCTCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-59*08  139  ...A....G......T.......T..............................AG............A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G 
                    Query_997    181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGT  270
V  93.4% (228/244)  IGHV4-59*08  229  .............A......C..........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_997    271  TATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  334
J  94.2% (49/52)    IGHJ1*01     1    ------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_142429

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           397     8e-113
IGHD6-13*01                                                                                           27.6    8e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACGGTA	ATAGCGGCAGCTGGTAC	ATTTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACGGTAATAGCGGCAGCTGGTACATTTTACTACTTTGACAAC	ARTVIAAAGTFYYFDN	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	271	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  T  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_998    1    GCAGCTGGTGCAGTCTGGGACTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  94.1% (271/288)  IGHV1-69*01  6    ...................G......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  N  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  G  I  I  P  I  F  G  T  T  T  Y  A  Q
                    Query_998    91   TGGTATCAACTGGGTGCGACAGGCCCCTGGACAACGCCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACTACAACCTACGCACA  180
V  94.1% (271/288)  IGHV1-69*01  96   ..C.....G.........................G.G......................................AG...A.........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  F  T  A  D  E  S  S  S  A  S  Y  M  E  L  R  S  L  R  S  E  D  T  A
                    Query_998    181  GAAGTTCCAGGACAGAGTCACCTTTACCGCGGACGAATCCTCGAGCGCAAGCTACATGGAGCTGCGCAGCCTGAGATCTGAGGACACGGC  270
V  94.1% (271/288)  IGHV1-69*01  186  ...........G.........GA.................A.....A..GC.............A.........................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  T  V  I  A  A  A  G  T  F  Y  Y  F  D  N  W  G  Q  G  T  L  V  T  V  S
                    Query_998    271  CGTCTATTACTGTGCGAGGACGGTAATAGCGGCAGCTGGTACATTTTACTACTTTGACAACTGGGGCCAGGGAACTCTGGTCACCGTCTC  360
V  94.1% (271/288)  IGHV1-69*01  276  ...G..............------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  94.1% (16/17)    IGHD6-13*01  5    -------------------------.....A...........------------------------------------------------  21
J  95.7% (44/46)    IGHJ4*02     1    -----------------------------------------------...........T................C..............  43

                                         
                                        S
                    Query_998    361  CTC  363
J  95.7% (44/46)    IGHJ4*02     44   ...  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_303903

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           380     1e-107
IGHD3-10*01                                                                                           21.8    0.045 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGGA	CATCGA	ATTACTATGGT	AATTGGGGGGGGATTTAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGACATCGAATTACTATGGTAATTGGGGGGGGATTTATTACGGTATGGACGTC	ARTSNYYGNWGGIYYGMDV	263	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	47	4	0	92.2
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	109	5	0	95.6
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	269	256	13	0	95.2


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  N  T  K  G  M  Y  V  S  W  I  R
                    Query_999    1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCAACACTAAGGGAATGTATGTGAGTTGGATCCG  90
V  95.2% (256/269)  IGHV2-70*01  30   ...........................................................G.....GT.......G......C........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  F  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T
                    Query_999    91   ACAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCTTTCATTGATTGGGATGATGATAAATACTACAGCACGTCTCTGAAGACCAGGCTCAC  180
V  95.2% (256/269)  IGHV2-70*01  120  T................................AC..................................A....................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  K  D  T  S  R  N  Q  V  V  L  I  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  T
                    Query_999    181  CATCTCCAAGGACACCTCCAGAAACCAGGTGGTCCTTATAATGACCAATATGGACCCTGTGGACACAGCCACATATTACTGTGCACGGAC  270
V  95.2% (256/269)  IGHV2-70*01  210  ....................A.................C.........C.......................G................-  298
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                      ----------------CDR3-IMGT----------------------->                                 
                                        S  N  Y  Y  G  N  W  G  G  I  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_999    271  ATCGAATTACTATGGTAATTGGGGGGGGATTTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  352
D  100.0% (11/11)   IGHD3-10*01  3    -----...........------------------------------------------------------------------  13
J  100.0% (48/48)   IGHJ6*02     15   ----------------------------------................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_208392

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_1000   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_1000   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_1000   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_1000   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_208395

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            322     2e-90
IGHD5-18*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	N/A	TGGATACAACTATGG	GAGTGTCCCGGCGGGCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTGGATACAACTATGGGAGTGTCCCGGCGGGCATTGACTAC	AGYNYGSVPAGIDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	242	2	2	0	0	100
Total	N/A	N/A	242	224	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  V  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_1001   1    ACCCTGTCCCTCACCTGCGCTGTTTCTGGTGTCTCCATCAGTAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  92.6% (224/242)  IGHV4-4*02   49   .......................C.......G.........C................................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  M  Y  H  G  G  T  T  N  Y  K  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K 
                    Query_1001   91   GAGTGGATTGGGGAAATGTACCATGGTGGGACCACCAACTACAAGCCGTCCCTCAAGAGTCGGGTCTCCATATCCGTGGACACGTCCAAG  180
V  92.6% (224/242)  IGHV4-4*02   139  .................C..T...A......G............C.................A...A.......A..A....A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  G  Y  N  Y  G  S  V  P  A 
                    Query_1001   181  AACCAGTTCTCCCTGACGCTGACCTCTGTGACCGCCGCGGACACGGCCATTTATTATTGTGCTGGATACAACTATGGGAGTGTCCCGGCG  270
V  92.6% (224/242)  IGHV4-4*02   229  ................A.....G.........................G.G.....C.....----------------------------  290
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  93.3% (14/15)    IGHD5-18*01  2    --------------------------------------------------------------........G......-------------  16

                                      ----------->                                  
                                       G  I  D  Y  W  G  Q  G  A  L  V  T  A  S  S  
                    Query_1001   271  GGCATTGACTACTGGGGCCAGGGAGCCCTGGTCACCGCCTCCTCAG  316
J  95.2% (40/42)    IGHJ4*02     7    ----....................A............T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_286288

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           251     9e-69
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              58.4    1e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATAGCTATA	ATGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATAGCTATAATGGC	ARGLLIEDPNYVWGSFRRNHNSYNG	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	41	10	0	80.4
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	91	23	0	79.8
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	202	42	0	82.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  G  L  E 
                    Query_1002   1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  82.8% (202/244)  IGHV4-59*01  49   ..................A....C.......G.......A...G..........AG....A.C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  I  L  S  T  G  S  T  H  Y  N  P  S  V  R  N  R  V  T  L  S  G  D  M  S  R  D 
                    Query_1002   91   TGGCTTGGCTTCATCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAATCGTGTCACCCTGTCAGGAGACATGTCTAGGGAT  180
V  82.8% (202/244)  IGHV4-59*01  139  ...A....G.AT....AT.A..G..........A..............C...A..G...A......A.A....T.....C...C.A.A.C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  F  V  T  A  A  D  P  A  P  Y  F  F  A  R  G  L  L  I  E  D  P  N  Y 
                    Query_1002   181  CAGTTGTCCCTCAACCTGATCTTTGTGACCGCTGCGGACCCGGCCCCGTATTTCTTTGCGAGAGGTCTTCTTATCGAAGATCCCAACTAT  270
V  82.8% (202/244)  IGHV4-59*01  229  .....C.....G..G....G..C................A.....GT.....A..G........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  N  S  Y  N  G  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_1002   271  GTTTGGGGGAGTTTTCGCCGCAATCACAATAGCTATAATGGCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  92.3% (36/39)    IGHJ3*01     12   -------------------------------------...T................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_304274

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         338     5e-95
IGHD2-2*02                                                                                            12.2    32   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGTCA	CTGGTATAC	TTACGTCAGCGGGGGATATG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTGGTATACTTACGTCAGCGGGGGATATGTTGACTAC	ARGHWYTYVSGGYVDY	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  C  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_1003     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGCTACTCCATCAGCAGTGGTTACTGCTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGCCTG  90
V  93.9% (231/246)  IGHV4-38-2*01  49   .............................T......................A.................................G...  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  C  I  Y  Y  S  G  I  T  Y  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K 
                    Query_1003     91   GAGTGGATTGGGTGCATCTATTACAGTGGGATCACCTACTACAACCCGTCCCTCAAGAGTCGAGCTACCATATCAGTAGACACGTCTAAG  180
V  93.9% (231/246)  IGHV4-38-2*01  139  ............A.T......C.T.......G................................TC....................C...  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                         N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  W  Y  T  Y  V  S 
                    Query_1003     181  AACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCACTGGTATACTTACGTCAGC  270
V  93.9% (231/246)  IGHV4-38-2*01  229  .......................C........C.....A...........G...............------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  88.9% (8/9)      IGHD2-2*02     22   -----------------------------------------------------------------------...C.....----------  30

                                        ----------------->                                  
                                         G  G  Y  V  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_1003     271  GGGGGATATGTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  322
J  97.6% (41/42)    IGHJ4*02       7    ----------.............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_140484

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           343     2e-96
IGHD3-3*01                                                                                            44.9    5e-09
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCCATCTTGGCGG	TTACGATTTTTGGAGTGGTTATT	CCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCCATCTTGGCGGTTACGATTTTTGGAGTGGTTATTCCCTTGACTAC	ARDPHLGGYDFWSGYSLDY	230	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	24	0	0	100
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	113	1	0	99.1
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	222	3	0	98.7


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  I  L  W  Y  D
                    Query_1004   13   GTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAATTCTATGGTATGA  102
V  98.7% (222/225)  IGHV3-33*01  72   ............................................................................G..A..........  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_1004   103  TGGAAGTAATAAATACTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAA  192
V  98.7% (222/225)  IGHV3-33*01  162  ....................C.....................................................................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------------CDR3-IMGT--------------------
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  H  L  G  G  Y  D  F  W  S  G  Y  S  L  D
                    Query_1004   193  CAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCCCCATCTTGGCGGTTACGATTTTTGGAGTGGTTATTCCCTTGA  282
V  98.7% (222/225)  IGHV3-33*01  252  .............................................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (23/23)   IGHD3-3*01   4    ------------------------------------------------------------.......................-------  26
J  100.0% (42/42)   IGHJ4*02     7    --------------------------------------------------------------------------------------....  10

                                      --->                                  
                                        Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1004   283  CTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  320
J  100.0% (42/42)   IGHJ4*02     11   ......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_140485

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           283     1e-78
IGHD2-21*02                                                                                           23.8    0.010
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGGAACTGGA	GGTGGTGACTGC	CTT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGGAACTGGAGGTGGTGACTGCCTTGACCTC	ARAGTGGGDCLDL	239	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	47	4	0	92.2
CDR2-IMGT	101	124	24	20	4	0	83.3
FR3-IMGT	125	238	114	100	14	0	87.7
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	231	206	25	0	89.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  S  F  S  G  F  G  M  H  W  V  R  Q  A  P  G  R  G  L  E  W  V  A  L  I  
                    Query_1005   15   GTGCAGCGTCTGGATTCAGCTTCAGTGGCTTTGGCATGCATTGGGTCCGCCAGGCTCCAGGCAGGGGCCTGGAGTGGGTGGCACTTATAC  104
V  89.2% (206/231)  IGHV3-33*01  65   ..................C.......A...A.........C......................A...G...............G.....T  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      R  F  D  G  S  N  T  N  Y  A  A  F  A  K  S  R  F  I  I  S  R  D  N  S  K  N  T  M  D  L  
                    Query_1005   105  GGTTTGATGGGAGTAATACAAATTATGCAGCCTTCGCGAAGAGTCGATTCATCATCTCCAGAGACAATTCCAAGAACACGATGGATCTGC  194
V  89.2% (206/231)  IGHV3-33*01  155  ...A......A.......A.T.C.......A..C..T....G.C.......C............................C..T......  244
                                      W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------CDR3-IMGT-------------->       
                                      Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  A  G  T  G  G  G  D  C  L  D  L  W  G  
                    Query_1005   195  AGATGAACAGTCTGAGAGTCGAGGATACGGCTGTGTATTACTGTGCGAGAGCCGGAACTGGAGGTGGTGACTGCCTTGACCTCTGGGGCC  284
V  89.2% (206/231)  IGHV3-33*01  245  .A........C.......C......C.........................---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (12/12)   IGHD2-21*02  11   --------------------------------------------------------------............----------------  22
J  97.5% (39/40)    IGHJ5*02     12   -----------------------------------------------------------------------------....C........  24

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_1005   285  AGGGAACCCTGGTCACCGTCTCCTCAG  311
J  97.5% (39/40)    IGHJ5*02     25   ...........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_140486

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           333     1e-93
IGHD2-21*01                                                                                           12.2    32   
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-21*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGCACAAG	TGTGGT	CCA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGCACAAGTGTGGTCCATGATGCTATTGATATC	ARGRTSVVHDAIDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1006   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGCACTTATAGCATGAACTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-21*01  47   ...................................A.......T.GC.............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  G  S  S  G  F  I  Y  Y  A  N  S  V  E  G  R  I  T  I  S  R  D  N  A  
                    Query_1006   91   AGTGGGTCTCATCTATTACTGGTAGTAGTGGTTTCATATACTACGCAAACTCAGTGGAGGGCCGAATCACCATCTCCAGAGACAACGCCA  180
V  92.8% (231/249)  IGHV3-21*01  137  .............C....G.A........A...A.............G........A........T........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  S  N  L  R  A  E  D  S  A  V  Y  Y  C  A  R  G  R  T  S  V  V  H  
                    Query_1006   181  AGAACTCACTGTATCTGCAAATGAGTAACCTGAGAGCCGAGGACTCGGCTGTTTATTACTGTGCGAGAGGTCGCACAAGTGTGGTCCATG  270
V  92.8% (231/249)  IGHV3-21*01  227  ........................AC.G................A.......G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*01  8    -------------------------------------------------------------------------------......-----  13
J  98.0% (49/50)    IGHJ3*02     1    ----------------------------------------------------------------------------------------..  2

                                      ------------->                                  
                                      D  A  I  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1006   271  ATGCTATTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  318
J  98.0% (49/50)    IGHJ3*02     3    .....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_140487

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD2-21*01                                                                                           10.3    123   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TGTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTGTCCAAGAAAGAGTCTACTACTTCGACTAC	ARSSLFVQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_1007   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTTCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (240/248)  IGHV4-31*03  49   ...............................G..C......C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1007   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCT  180
V  96.8% (240/248)  IGHV4-31*03  139  ..................................G.............C......................C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  V  Q  E 
                    Query_1007   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTTCTCTATTTGTCCAAGAA  270
V  96.8% (240/248)  IGHV4-31*03  229  ..........................C.........................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD2-21*01  22   ---------------------------------------------------------------------------.....----------  26

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_1007   271  AGAGTCTACTACTTCGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  325
J  95.8% (46/48)    IGHJ4*02     1    -------.......T.............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_140480

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           339     2e-95
IGHD2-15*01                                                                                           14.1    9.9  
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	GGCC	GGATATT	CATCTGATGGACGTGAATATATGACCCCGTTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGGGCCGGATATTCATCTGATGGACGTGAATATATGACCCCGTTGTTTGACTTT	SRAGYSSDGREYMTPLFDF	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	9	77	69	64	5	0	92.8
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	19	5	0	79.2
FR3-IMGT	177	290	114	98	16	0	86
CDR3-IMGT (germline)	291	295	5	4	1	0	80
Total	N/A	N/A	287	252	35	0	87.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I  N  Y 
                    Query_1008   9    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGACAATCTCCTGCCAGGCTTCCGGTTACAGTTTTATCAACTAC  98
V  87.8% (252/287)  IGHV1-18*04  7    .................................................AGG........A.......T.......CC....C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  P  H  K  G  N  T  K  Y  A  Q 
                    Query_1008   99   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAGGGGCTCGAGTGGATGGGTTGGATCGGCCCGCACAAAGGTAACACAAAATATGCACAG  188
V  87.8% (252/287)  IGHV1-18*04  97   ........C.......................A.....T...........A......A..G.TT....T...........C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  H  L  D  V  R  N  L  R  S  D  D  T  A 
                    Query_1008   189  AGTTTCCAGGGCAGAGTCACGATGACCACAGACACATTGACGGGCACAGCTCACCTGGACGTGAGGAACCTGCGATCTGACGACACGGCC  278
V  87.8% (252/287)  IGHV1-18*04  187  .AGC................C................CC...A.......CT..A....GC......G....A.................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  S  R  A  G  Y  S  S  D  G  R  E  Y  M  T  P  L  F  D  F  W  G  Q  G  T  P  V 
                    Query_1008   279  GTCTATTACTGTTCGAGGGCCGGATATTCATCTGATGGACGTGAATATATGACCCCGTTGTTTGACTTTTGGGGCCAGGGAACCCCGGTC  368
V  87.8% (252/287)  IGHV1-18*04  277  ..G.........G....-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  100.0% (7/7)     IGHD2-15*01  2    ---------------------.......--------------------------------------------------------------  8
J  90.7% (39/43)    IGHJ4*02     6    ------------------------------------------------------------.......AC................T....  35

                                                   
                                       S  V  S  S  
                    Query_1008   369  TCCGTCTCCTCAG  381
J  90.7% (39/43)    IGHJ4*02     36   A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_140481

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           324     7e-91
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGGGATG	AGTGGCTGGT	GATGGCCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGATGAGTGGCTGGTGATGGCCCAC	ARGGDEWLVMAH	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  G  N  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1009   1    GGTCCCTGAGACTCTCCTGTGAAGCGTCTGGATTCACGTTTGGGAACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-33*01  47   .....................C...............C..CA.T.G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  F  Y  D  G  S  I  K  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1009   91   AGTGGGTGGCAGTTATCTTTTATGATGGAAGTATTAAAGACTATGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAACTCCA  180
V  91.6% (228/249)  IGHV3-33*01  137  ................A.GG.............A....T.........................A....................T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  M  V  F  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  R  G  G  D  E  W  L  V  
                    Query_1009   181  AGAATATGGTGTTCCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTATATTACTGTGCGAGAGGGGGGGATGAGTGGCTGGTGA  270
V  91.6% (228/249)  IGHV3-33*01  227  ....C.C.C...AT......................C...............G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD6-19*01  10   ------------------------------------------------------------------------------..........--  19

                                      ------->                                  
                                      M  A  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1009   271  TGGCCCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (36/36)   IGHJ4*02     13   ------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_140482

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           329     3e-92
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACGATGC	CTACGGT	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATGACGATGCCTACGGTCTTGACTAC	VRDDDAYGLDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  W  M  H  W  V  R  Q  A  P  G  K  G  P  
                    Query_1010   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGACACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCCGG  90
V  92.0% (230/250)  IGHV3-74*01  47   ..............................................CT.......................................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  C  V  A  R  I  K  S  D  G  S  Y  R  D  Y  A  D  F  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1010   91   TGTGCGTCGCACGTATCAAGAGTGATGGGAGTTACAGAGACTACGCGGACTTCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.0% (230/250)  IGHV3-74*01  137  ....G...T.......T..T............AG..C.AG...........C......................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  I  L  Y  L  Q  M  N  S  L  S  A  D  D  T  A  V  Y  Y  C  V  R  D  D  D  A  Y  G  L  
                    Query_1010   181  AGAACATTCTGTATTTGCAAATGAACAGTCTGAGTGCCGACGACACGGCTGTCTATTACTGTGTAAGAGATGACGATGCCTACGGTCTTG  270
V  92.0% (230/250)  IGHV3-74*01  227  ......CG......C...................A.....G...........G..........C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD4-17*01  4    -------------------------------------------------------------------------------.......----  10
J  95.2% (40/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  L  S  S  
                    Query_1010   271  ACTACTGGGGCCAGGGGACCCTGGTCACCCTCTCCTCAG  309
J  95.2% (40/42)    IGHJ4*02     10   ................A............G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_140483

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           327     9e-92
IGHD3-10*01                                                                                           10.3    119  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TAGGACCGGATG	GGTTC	AGTTGAT	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAGGACCGGATGGGTTCAGTTGATCTACCTTGACTCC	ARHRTGWVQLIYLDS	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1011   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGTGGTTATTCCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*08  49   ...................C......................A....C.A........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  F  I  S  Y  S  G  N  T  N  S  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_1011   91   TGGATTGGGTTTATCTCATACAGTGGGAATACCAACTCCAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCGAAGAGT  180
V  92.7% (227/245)  IGHV4-59*08  139  ..........A.....AT..........GC.......A.............................................C....AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  I  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  H  R  T  G  W  V  Q  L  I 
                    Query_1011   181  CAATTCTCCCTGAAGTTGATTTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAGACATAGGACCGGATGGGTTCAGTTGATC  270
V  92.7% (227/245)  IGHV4-59*08  229  ..G............C...GC...............................A............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-10*01  11   -----------------------------------------------------------------------------.....--------  15
J  93.3% (42/45)    IGHJ4*02     2    -----------------------------------------------------------------------------------------.  2

                                      ----------->                                
                                       Y  L  D  S  W  G  Q  G  N  L  V  T  V  S  S
                    Query_1011   271  TACCTTGACTCCTGGGGCCAGGGAAACCTGGTCACCGTCTCCTC  314
J  93.3% (42/45)    IGHJ4*02     3    ...T......A..............C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_86296

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD2-21*01                                                                                           10.3    117  
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-21*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TA	GGTGA	AGCCCAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGTGAAGCCCAGTACTGGTACTTCGATCTC	ARVGEAQYWYFDL	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	232	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1012   1    ACCCTGTCCCTCACCTGCAGTGTTTCTGGTGACTCAATCAGTGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (232/244)  IGHV4-59*01  49   ...................C...C.......G...C......A...A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  T  S  E  N 
                    Query_1012   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTCGACACGTCCGAGAAC  180
V  95.1% (232/244)  IGHV4-59*01  139  .................................A.............................A..........A.........A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       K  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  G  E  A  Q  Y  W  Y  F 
                    Query_1012   181  AAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTAGGTGAAGCCCAGTACTGGTACTTC  270
V  95.1% (232/244)  IGHV4-59*01  229  C..................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*01  14   ------------------------------------------------------------------.....-------------------  18
J  100.0% (52/52)   IGHJ2*01     2    ------------------------------------------------------------------------------............  13

                                      ----->                                  
                                       D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_1012   271  GATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  310
J  100.0% (52/52)   IGHJ2*01     14   ........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_140488

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           410     1e-116
IGHD3-9*01                                                                                            37.2    1e-06 
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAG	CCCTCCA	GTATTACGATATTTTGACT	CCCAAGGGGGTGC	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGCCCTCCAGTATTACGATATTTTGACTCCCAAGGGGGTGCGGTTCGACCCC	TRALQYYDILTPKGVRFDP	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	175	30	28	2	0	93.3
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	296	279	17	0	94.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  Q  P  G  R  S  L  R  L  S  C  I  A  S  G  F  I  F  G  D  Y
                    Query_1013   1    GCAGCTGGTGCAGTCTGGGGGAGGCTTGGTACAGCCAGGGCGGTCCCTGAGACTCTCCTGTATAGCTTCTGGGTTCATCTTTGGTGATTA  90
V  94.3% (279/296)  IGHV3-49*04  6    ..........G...................................................C.........A....C............  95
                                        Q  L  V  E  S  G  G  G  L  V  Q  P  G  R  S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y

                                      ---><--------------------FR2-IMGT---------------------><----------CDR2-IMGT---------><----
                                        E  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  F  T  R  N  K  A  Y  G  G  T  T  E  Y
                    Query_1013   91   TGAAATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAGGTTTCACTAGAAACAAAGCTTATGGTGGGACAACAGAATA  180
V  94.3% (279/296)  IGHV3-49*04  96   ..CT....................................................T.....G...........................  185
                                        A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y

                                      ------------------------------------------------FR3-IMGT----------------------------------
                                        A  A  S  L  K  G  R  F  T  I  S  R  D  D  S  N  S  I  V  Y  L  Q  M  N  S  L  K  A  E  D
                    Query_1013   181  CGCCGCGTCTCTGAAAGGCAGATTCACCATTTCAAGAGATGATTCCAACAGTATCGTCTATCTACAAATGAACAGCCTGAAGGCCGAGGA  270
V  94.3% (279/296)  IGHV3-49*04  186  ..........G...................C.................A..C....C......G.................AA.......  275
                                        A  A  S  V  K  G  R  F  T  I  S  R  D  D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D

                                      ------------------><-----------------------CDR3-IMGT----------------------->              
                                        T  A  V  Y  Y  C  T  R  A  L  Q  Y  Y  D  I  L  T  P  K  G  V  R  F  D  P  W  G  P  G  T
                    Query_1013   271  CACAGCCGTGTACTACTGTACTAGAGCCCTCCAGTATTACGATATTTTGACTCCCAAGGGGGTGCGGTTCGACCCCTGGGGCCCGGGAAC  360
V  94.3% (279/296)  IGHV3-49*04  276  ............T.............----------------------------------------------------------------  301
                                        T  A  V  Y  Y  C  T  R                                                                  
D  100.0% (19/19)   IGHD3-9*01   1    ---------------------------------...................--------------------------------------  19
J  97.8% (44/45)    IGHJ5*02     7    -----------------------------------------------------------------..................A......  31

                                                          
                                        L  V  T  V  S  S  
                    Query_1013   361  CCTGGTCACCGTCTCCTCAG  380
J  97.8% (44/45)    IGHJ5*02     32   ....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_13853

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           321     6e-90
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_1014   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_1014   91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_1014   181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.8% (225/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_1014   271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_39480

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           272     2e-75
IGHD2-2*01                                                                                            12.2    30   
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GGGCCAGAGA	AGTAGGACC	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGAGGGCCAGAGAAGTAGGACCCTTGACTAC	ATEGQRSRTLDY	235	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	19	5	0	79.2
FR2-IMGT	49	99	51	47	4	0	92.2
CDR2-IMGT	100	120	21	17	4	0	81
FR3-IMGT	121	234	114	100	14	0	87.7
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	230	202	28	0	87.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  L  S  N  N  Y  M  S  W  V  R  Q  A  P  G  M  G  L  E  W  V  S  L  I 
                    Query_1015   13   TGTGCAGCCTCTGGATTCACCCTCAGTAATAACTATATGAGTTGGGTCCGCCAGGCTCCAGGGATGGGGCTGGAGTGGGTCTCTCTTATT  102
V  87.8% (202/230)  IGHV3-53*01  64   ..............G......G......GC.....C.....C......................A..................AG.....  153
                                       C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I 

                                      ---CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-----------
                                       Y  S  G  G  G  S  F  Y  T  H  S  V  E  G  R  F  T  I  S  R  D  D  Y  K  N  T  V  Y  L  Q 
                    Query_1015   103  TACAGCGGTGGTGGCTCCTTCTACACACACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACGATTACAAGAACACGGTTTATCTTCAA  192
V  87.8% (202/230)  IGHV3-53*01  154  ..T.........A..A.A.A....G..G........A..........................A...C..........C.G.........  243
                                       Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 

                                      -----------------------------------------><-------------CDR3-IMGT------------>            
                                       M  N  N  V  R  A  E  D  T  A  I  Y  Y  C  A  T  E  G  Q  R  S  R  T  L  D  Y  W  G  Q  G 
                    Query_1015   193  ATGAACAATGTTAGAGCCGAGGACACGGCCATATATTACTGTGCGACAGAGGGCCAGAGAAGTAGGACCCTTGACTACTGGGGCCAGGGA  282
V  87.8% (202/230)  IGHV3-53*01  244  .......GCC.G..................G.G.............G...----------------------------------------  293
                                       M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                           
D  88.9% (8/9)      IGHD2-2*01   11   ------------------------------------------------------------.....T...---------------------  19
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------....................  26

                                                            
                                       T  L  V  I  V  S  S  
                    Query_1015   283  ACCCTGGTCATCGTCTCCTCAG  304
J  97.6% (41/42)    IGHJ4*02     27   ..........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_147135

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           357     1e-100
IGHD3-16*01                                                                                           10.3    115   
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	A	TTGGG	TCTGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGGGTCTGCGTTTGACCAC	ARIGSAFDH	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1016   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTAG  90
V  96.0% (238/248)  IGHV3-48*03  47   ........................................C...............................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  S  G  S  T  R  Y  T  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1016   91   AGTGGGTTTCATACATTAGTACCAGTGGTTCTACCAGATACACCGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (238/248)  IGHV3-48*03  137  .....................GT......AG.....T....TA...............................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  I  G  S  A  F  D  H  
                    Query_1016   181  AGAACTCACTGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAATTGGGTCTGCGTTTGACCACT  270
V  96.0% (238/248)  IGHV3-48*03  227  ...................A................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-16*01  16   ---------------------------------------------------------------------.....----------------  20
J  97.7% (42/43)    IGHJ4*02     6    --------------------------------------------------------------------------------......T...  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1016   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  97.7% (42/43)    IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_147134

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         346     2e-97
IGHD2-15*01                                                                                           18.0    0.63 
IGHJ6*02                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCACCTT	TATTGTAGT	TATGCCAGTATCGGCTGCTTGACCGGATGTTGCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGACCACCTTTATTGTAGTTATGCCAGTATCGGCTGCTTGACCGGATGTTGCCACTACTACGGTATGGACGTC	VRDHLYCSYASIGCLTGCCHYYGMDV	238	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	24	18	15	3	0	83.3
CDR1-IMGT	25	51	27	26	1	0	96.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	239	230	9	0	96.2


Alignments

                                        <----FR1-IMGT----><--------CDR1-IMGT--------><--------------------FR2-IMGT----------------
                                         L  S  C  A  V  S  G  Y  S  V  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  E  W  I 
                    Query_1017     7    CTCTCCTGTGCTGTCTCTGGTTACTCCGTCAGCAGTGGTTACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTGGAGTGGATT  96
V  96.2% (230/239)  IGHV4-38-2*02  58   ...A....CA.................A..............................................................  147
                                         L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  E  W  I 

                                        -----><-----CDR2-IMGT-----><----------------------------------------------------FR3-IMGT--
                                         G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N  Q  F 
                    Query_1017     97   GGGAGTATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACCAGTTC  186
V  96.2% (230/239)  IGHV4-38-2*02  148  ..............................................................A...........................  237
                                         G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F 

                                        --------------------------------------------------><----------------------------------CDR3
                                         S  L  N  L  R  S  M  T  A  A  D  T  A  V  Y  Y  C  V  R  D  H  L  Y  C  S  Y  A  S  I  G 
                    Query_1017     187  TCCCTGAACCTGAGGTCTATGACCGCCGCAGACACGGCCGTGTATTACTGTGTGAGAGACCACCTTTATTGTAGTTATGCCAGTATCGGC  276
V  96.2% (230/239)  IGHV4-38-2*02  238  ........G.....C...G.................................C......-------------------------------  296
                                         S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                                  
D  100.0% (9/9)     IGHD2-15*01    5    ------------------------------------------------------------------.........---------------  13

                                        -IMGT--------------------------------->                                 
                                         C  L  T  G  C  C  H  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1017     277  TGCTTGACCGGATGTTGCCACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  348
J  100.0% (53/53)   IGHJ6*02       10   -------------------.....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_147130

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           410     1e-116
IGHD3-16*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	TGGGGGA	TGGCGACAATTCTGACATTTCG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTC	TRVGDGDNSDISYGMDV	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	70	1	0	98.6
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	294	6	5	1	0	83.3
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  I  
                    Query_1018   5    TGCAGCTGGTGCAGTCTGGAGCAGAGGTTAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTAGCATCT  94
V  95.2% (276/290)  IGHV5-51*01  5    ............................G.................................................G.....C..G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      F  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  I  K  Y  S  
                    Query_1018   95   TCTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATATCAAATACAGTC  184
V  95.2% (276/290)  IGHV5-51*01  95   A....................................................A........................C..G......C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_1018   185  CGTCCTTCCAAGGCCAGGTCTCCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTTTGAAGGCCTCGGACACCG  274
V  95.2% (276/290)  IGHV5-51*01  185  ....................A.................................................CC..................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><--------------------CDR3-IMGT-------------------->                         
                                      A  I  Y  Y  C  T  R  V  G  D  G  D  N  S  D  I  S  Y  G  M  D  V  W  G  Q  G  T  K  V  T  
                    Query_1018   275  CCATCTATTACTGTACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTCTGGGGCCAAGGGACCAAGGTCACCG  364
V  95.2% (276/290)  IGHV5-51*01  275  ....G.........G.....----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD3-16*01  17   ---------------------.......--------------------------------------------------------------  23
J  95.8% (46/48)    IGHJ6*02     15   --------------------------------------------------.....T.........................C........  54

                                              
                                      V  S  S 
                    Query_1018   365  TCTCCTCA  372
J  95.8% (46/48)    IGHJ6*02     55   ........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_147133

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           294     6e-82
IGHD1-26*01                                                                                           10.3    117  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	T	TATAG	ATTTCAAAGCAATGAACCCCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATTATAGATTTCAAAGCAATGAACCCCTCTTTGACTAC	AKDYRFQSNEPLFDY	230	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	23	1	0	95.8
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	17	7	0	70.8
FR3-IMGT	116	229	114	107	7	0	93.9
CDR3-IMGT (germline)	230	237	8	7	1	0	87.5
Total	N/A	N/A	224	206	18	0	92


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  R  G  L  E  W  V  S  G  I  I  E  S 
                    Query_1019   14   TCTGGATTCACCTTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGGAGTGGGTCTCAGGTATAATTGAAAGT  103
V  92.0% (206/224)  IGHV3-23*01  73   ...................G...................................A....................C...T.G..GT...  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  G  D  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 
                    Query_1019   104  GGTGGTGACACGTACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACCCTGTATCTCCAAATGAAC  193
V  92.0% (206/224)  IGHV3-23*01  163  ......AG...A......G....................................................G........G.........  252
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><-----------------CDR3-IMGT----------------->         
                                       S  L  R  D  E  D  T  A  F  Y  Y  C  A  K  D  Y  R  F  Q  S  N  E  P  L  F  D  Y  W  G  Q 
                    Query_1019   194  AGCCTCAGAGACGAGGACACGGCCTTTTATTACTGTGCGAAGGATTATAGATTTCAAAGCAATGAACCCCTCTTTGACTACTGGGGCCAG  283
V  92.0% (206/224)  IGHV3-23*01  253  .....G....C.............G.A..............A..----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  100.0% (5/5)     IGHD1-26*01  3    ---------------------------------------------.....----------------------------------------  7
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------------------------------...................  23

                                                               
                                       G  T  Q  V  T  V  S  S  
                    Query_1019   284  GGAACCCAGGTCACCGTCTCCTCAG  308
J  97.7% (43/44)    IGHJ4*02     24   .......T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_147132

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         297     7e-83
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	GGAGTCGTAATTAT	CATGGGAATTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGAGTCGTAATTATCATGGGAATTTCTACTTCGACCAC	ARGSRNYHGNFYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	220	30	0	88


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  D  S  V  Y  Y  S  L  N  W  I  R  Q  T  P  L  K  G 
                    Query_1020     1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCATCGACAGTGTTTACTACTCCTTAAACTGGATCCGGCAGACACCACTGAAGGGC  90
V  88.0% (220/250)  IGHV4-30-2*01  49   .......................C...............AG.....G.GGT.......GG.G.............C.....GG.......  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Q  H  S  G  A  T  Y  Y  N  P  S  L  E  S  R  V  S  L  S  V  D  R  S 
                    Query_1020     91   CTGGAGTGGATTGGCTACATCCAGCATTCTGGGGCCACCTACTACAACCCGTCCCTCGAGAGTCGGGTCTCCCTTTCAGTAGACCGGTCC  180
V  88.0% (220/250)  IGHV4-30-2*01  139  ..............G......T.T...AG....AG......................A.......A...A..A.A.........A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  S  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  R  N  Y  H  G 
                    Query_1020     181  AAGAGCCAGTTCTCCCTGAGGCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGAGGGAGTCGTAATTATCATGGG  270
V  88.0% (220/250)  IGHV4-30-2*01  229  ....A..............A.....G...........................G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  85.7% (12/14)    IGHD3-3*01     15   ----------------------------------------------------------------------.....G..T.....------  28

                                        ----------------->                                  
                                         N  F  Y  F  D  H  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_1020     271  AATTTCTACTTCGACCACTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTCAG  322
J  91.5% (43/47)    IGHJ4*02       2    -----......T...T...............C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_79878

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           335     4e-94
IGHD3-16*01                                                                                           16.1    2.5  
IGHJ3*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCCACGATACTC	ATGCTTAT	TTTGGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCCACGATACTCATGCTTATTTTGGGGCTTTTGATATC	AGHDTHAYFGAFDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	250	36	0	87.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  T  C  K  A  S  G  V  T  F  S  S  F
                    Query_1021   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAGGGTCACCTGCAAGGCTTCTGGAGTCACGTTCAGTAGTTT  90
V  87.4% (250/286)  IGHV1-69*06  6    ..................G...............................A....T..................G...C.....C..C.A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  R  W  V  R  Q  T  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  L  N  T  P  N  Y  A  Q
                    Query_1021   91   TGCTGTTAGATGGGTGCGCCAGACCCCTGGACAAGGGCTCGAGTGGATGGGAGGGATCATCCCCATCCTCAATACGCCAAACTACGCACA  180
V  87.4% (250/286)  IGHV1-69*06  96   ....A.C..C........A...G................T.......................T...T.TGG...AG.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  H  G  R  V  T  I  S  A  D  K  S  T  T  T  V  Y  L  E  L  R  G  L  G  S  H  D  T  A
                    Query_1021   181  GAAGTTCCACGGCAGAGTCACGATTAGCGCGGACAAGTCCACGACCACAGTCTACCTGGAGTTGAGAGGTCTGGGATCTCACGACACGGC  270
V  87.4% (250/286)  IGHV1-69*06  186  .........G................C.........A.......G.....C....A.....C....CA.C...A.....G.G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  G  H  D  T  H  A  Y  F  G  A  F  D  I  W  G  P  G  T  R  V  T  V  S  S  
                    Query_1021   271  CGTATATTATTGTGCGGGCCACGATACTCATGCTTATTTTGGGGCTTTTGATATCTGGGGCCCAGGGACAAGGGTCACCGTCTCTTCAG  359
V  87.4% (250/286)  IGHV1-69*06  276  ...G.....C......-------------------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                          
D  100.0% (8/8)     IGHD3-16*01  27   -----------------------------........----------------------------------------------------  34
J  95.7% (44/46)    IGHJ3*02     5    -------------------------------------------...................A........T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_333210

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         346     2e-97
IGHD2-2*02                                                                                            35.3    4e-06
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	GGATATTGTAGTGGTATCAGGTGCTTTACC	GGGGTAG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGGATATTGTAGTGGTATCAGGTGCTTTACCGGGGTAGGGTTCGACCCC	AREGYCSGIRCFTGVGFDP	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	30	25	2	3	83.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	251	238	10	3	94.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  S  V  S  G  D  S  I  S  S  G     Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_1022     1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGCAGTGGG---TACTCCTGGAGCTGGATCCGGCAGCCACCGGGGAAGGGC  87
V  94.8% (238/251)  IGHV4-30-2*01  49   ..................G............G...............TGGT.............................A.........  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  R  S 
                    Query_1022     88   CTGGAGTGGATTGGGTACATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCATTAGACAGGTCC  177
V  94.8% (238/251)  IGHV4-30-2*01  139  ..........................................................................A...G...........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                         T  N  Q  V  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  Y  C  S  G  I 
                    Query_1022     178  ACGAACCAGGTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTACTGTGCCAGAGAGGGATATTGTAGTGGTATC  267
V  94.8% (238/251)  IGHV4-30-2*01  229  .A.......T................C.............................T..............-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.7% (26/30)    IGHD2-2*02     2    ------------------------------------------------------------------------............A...C.  19

                                        3-IMGT----------------------->                                  
                                         R  C  F  T  G  V  G  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1022     268  AGGTGCTTTACCGGGGTAGGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  86.7% (26/30)    IGHD2-2*02     20   ..C....A....----------------------------------------------------  31
J  100.0% (45/45)   IGHJ5*02       7    -------------------.............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_276273

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           332     3e-93
IGHD6-25*01                                                                                           12.2    31   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-25*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGGG	GCATCGGCT	GAGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGGGCATCGGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
Total	N/A	N/A	242	227	15	0	93.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1023   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.8% (227/242)  IGHV3-33*03  47   .....................................C..C.....C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  K  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_1023   91   AGTGGGTGGCAGTTATATGGTATGATGGGATTAAAAAATACTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCA  180
V  93.8% (227/242)  IGHV3-33*03  137  ............................A.G...T..........C.....................................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_1023   181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGGGCATCGGCTGAGGGGTGGTTCG  270
V  93.8% (227/242)  IGHV3-33*03  227  .......G....A......A..............................G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  88.9% (8/9)      IGHD6-25*01  8    --------------------------------------------------------------------...G.....-------------  16
J  100.0% (46/46)   IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1023   271  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (46/46)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_276272

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           369     2e-104
IGHD1-1*01                                                                                            18.0    0.63  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCTT	TACAACTGG	GTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCTTTACAACTGGGTTTTTGACTTC	ARGLYNWVFDF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	263	27	0	90.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  D  T  F  T  S  Y
                    Query_1024   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCGGGGTCCTCGGTGAGGGTCTCCTGCAAGGCTTCTGGAGACACCTTCACTAGTTA  90
V  90.7% (263/290)  IGHV1-69*01  6    ..................G.................T.............A.......................G........GC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        S  I  S  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  G  I  I  P  R  F  G  T  K  N  Y  A  Q
                    Query_1024   91   CAGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGAGGCATCATCCCCAGGTTTGGTACAAAGAATTACGCACA  180
V  90.7% (263/290)  IGHV1-69*01  96   TGC...................................T...............G........T.TC.........GCA..C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  G  P  T  S  T  V  Y  M  D  L  S  S  L  T  S  E  D  T  A
                    Query_1024   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGGACCCACGAGCACAGTCTACATGGACCTGAGCAGCCTGACATCTGAGGACACGGC  270
V  90.7% (263/290)  IGHV1-69*01  186  ...................................A.T............C.........G.............G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                 
                                        T  Y  Y  C  A  R  G  L  Y  N  W  V  F  D  F  W  G  Q  G  S  L  V  T  V  S  S 
                    Query_1024   271  CACATATTACTGTGCGAGAGGGCTTTACAACTGGGTTTTTGACTTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCA  349
V  90.7% (263/290)  IGHV1-69*01  276  .GTG................-----------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                             
D  100.0% (9/9)     IGHD1-1*01   3    -------------------------.........---------------------------------------------  11
J  95.2% (40/42)    IGHJ4*02     6    -------------------------------------.......A.............A....................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_276270

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           366     2e-103
IGHD3-3*01                                                                                            12.2    37    
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAGCGAC	CGATTT	CTCGGGAATACTTA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAGCGACCGATTTCTCGGGAATACTTATACTACGGTATGGATGTC	AKDKRPISREYLYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	262	28	0	90.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  S  F  T  N  Y 
                    Query_1025   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACGTCTGGTTATAGTTTCACCAACTAC  91
V  90.3% (262/290)  IGHV1-18*04  7    ...............................A...............................G.T........C.CC..T....G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  K  G  N  T  H  Y  G  Q 
                    Query_1025   92   GGTGTCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAAGGGTAACACACACTATGGTCAG  181
V  90.3% (262/290)  IGHV1-18*04  97   ...A....C........................................................C..T.........A......CA...  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  V  M  T  T  E  T  S  T  G  T  V  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_1025   182  AAGTTCCAGGGCAGAGTCGTCATGACGACAGAGACATCCACGGGCACAGTCTACATGGAGTTGCGGAGTCTGAGATCTGACGACACGGCC  271
V  90.3% (262/290)  IGHV1-18*04  187  ...C..............AC......C.....C.........A......C..........C..A....C.....................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  K  D  K  R  P  I  S  R  E  Y  L  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_1025   272  GTCTATTACTGCGCGAAAGATAAGCGACCGATTTCTCGGGAATACTTATACTACGGTATGGATGTCTGGGGCCAGGGGACCACGGTCACC  361
V  90.3% (262/290)  IGHV1-18*04  277  ..G........T....G...----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD3-3*01   7    ----------------------------......--------------------------------------------------------  12
J  96.0% (48/50)    IGHJ6*02     12   ------------------------------------------------..............C...........A...............  53

                                              
                                       V  S  S
                    Query_1025   362  GTCTCCTC  369
J  96.0% (48/50)    IGHJ6*02     54   ........  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_276276

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           276     3e-76
IGHD3-10*01                                                                                           18.0    0.58 
IGHJ1*01                                                                                              37.2    2e-06


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGAAACCCCCGA	ACTGTGGTTCGG	CCACTTATCTAACCTTGACTTG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGAAACCCCCGAACTGTGGTTCGGCCACTTATCTAACCTTGACTTG	ARDETPELWFGHLSNLDL	232	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	11	0	0	100
CDR1-IMGT	19	42	24	20	4	0	83.3
FR2-IMGT	43	93	51	46	5	0	90.2
CDR2-IMGT	94	117	24	16	8	0	66.7
FR3-IMGT	118	231	114	103	11	0	90.4
CDR3-IMGT (germline)	232	239	8	8	0	0	100
Total	N/A	N/A	232	204	28	0	87.9


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  Y  T  M  T  W  V  R  L  A  P  R  K  G  L  E  W  V  S  S  I  
                    Query_1026   8    GTGCAGCCTCTGGATTCACGTTCAGTTCCTATACCATGACCTGGGTCCGCCTGGCTCCACGGAAGGGGCTGGAGTGGGTTTCATCTATTA  97
V  87.9% (204/232)  IGHV3-21*01  65   ...................C......AG.....G.....A...........A.......G...................C.....C....  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  K  T  T  T  Y  E  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  F  L  
                    Query_1026   98   GTAAAACTACTACTTATGAAGACTACGCAGACTCTGTGAAGGGGCGATTCACCATCTCCAGAGACAACGCCAAGAATTCTCTCTTTCTAC  187
V  87.9% (204/232)  IGHV3-21*01  155  ...GT.G..G..G...CAT.T.............A........C................................C..A..G.A...G.  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------------CDR3-IMGT--------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  D  E  T  P  E  L  W  F  G  H  L  S  N  
                    Query_1026   188  AAATGAACAGCCTGAGGGCCGAGGACACGGCTGTTTATTTCTGTGCGAGAGACGAAACCCCCGAACTGTGGTTCGGCCACTTATCTAACC  277
V  87.9% (204/232)  IGHV3-21*01  245  ................A.................G....A............--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  91.7% (11/12)    IGHD3-10*01  6    ----------------------------------------------------------------...A........--------------  17

                                      ------->                                  
                                      L  D  L  W  G  Q  G  T  L  L  I  V  S  S  
                    Query_1026   278  TTGACTTGTGGGGCCAGGGCACCCTCCTAATTGTCTCCTCAG  319
J  85.3% (29/34)    IGHJ1*01     19   --------.................GG.C.CC..........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_276275

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            385     4e-109
IGHD2-2*01                                                                                            10.3    134   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAATAGGAATTCTTG	CCAGC	ACCCCCCTTG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATAATAGGAATTCTTGCCAGCACCCCCCTTGCGGTATGGACGTC	ARDNRNSCQHPPCGMDV	273	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	27	3	0	90
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	25	2	0	92.6
FR3-IMGT	159	272	114	102	12	0	89.5
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	280	263	17	0	93.9


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  D  S  A  T  W  N  W  
                    Query_1027  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGCGACAGTGTCTCTAGCGACAGTGCTACTTGGAACTGGA  90
V  93.9% (263/280)  IGHV6-1*01  26   ....................................................G...............A........G............  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  E  W  Y  N  D  S  A  M  S  V  K  
                    Query_1027  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCTGAGTGGTATAATGATTCTGCAATGTCTGTGAAAG  180
V  93.9% (263/280)  IGHV6-1*01  116  .......................................................CA...............A....G.A.........A  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     G  R  V  T  I  N  P  D  T  S  K  Q  Q  F  S  L  H  L  I  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_1027  181  GTCGAGTAACCATCAACCCAGACACATCCAAGCAGCAGTTCTCCCTGCATCTGATTTCTGTGACTCCCGAGGACACAGCTGTGTATTATT  270
V  93.9% (263/280)  IGHV6-1*01  206  .....A..........................A.C..............G....AC....................G...........C.  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><--------------------CDR3-IMGT-------------------->                                 
                                     C  A  R  D  N  R  N  S  C  Q  H  P  P  C  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1027  271  GTGCAAGAGATAATAGGAATTCTTGCCAGCACCCCCCTTGCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  356
V  93.9% (263/280)  IGHV6-1*01  296  ..........----------------------------------------------------------------------------  305
                                     C  A  R                                                                               
D  100.0% (5/5)     IGHD2-2*01  18   -------------------------.....--------------------------------------------------------  22
J  100.0% (46/46)   IGHJ6*02    17   ----------------------------------------..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_51562

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            394     7e-112
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_1028  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.4% (271/290)  IGHV1-8*02  6    ..................G..........................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_1028  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.4% (271/290)  IGHV1-8*02  96   ........A.........................................................C.......................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_1028  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.4% (271/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1028  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.4% (271/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_276279

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     3e-115
IGHD6-13*01                                                                                           12.2    36    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	69	2	0	97.2
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	293	3	3	0	0	100
Total	N/A	N/A	287	273	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  T  
                    Query_1029   7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCT  96
V  95.1% (273/287)  IGHV5-51*01  5    ...................................................A...............T...................G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  
                    Query_1029   97   ACTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCTTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGACACCAGATACAGTC  186
V  95.1% (273/287)  IGHV5-51*01  95   .......................A.......G......C......G..............................T...........C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  N  T  A  Y  L  Q  W  S  P  L  K  A  S  D  T  
                    Query_1029   187  CGTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCCCCCTGAAGGCCTCGGACACCG  276
V  95.1% (273/287)  IGHV5-51*01  185  .....................C...................A...G......................AG....................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-------------CDR3-IMGT------------>                                 
                                      A  M  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  P  G  T  L  V  T  V  S  S 
                    Query_1029   277  CCATGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCA  359
V  95.1% (273/287)  IGHV5-51*01  275  .................------------------------------------------------------------------  291
                                      A  M  Y  Y  C  A                                                                   
D  88.9% (8/9)      IGHD6-13*01  4    ----------------------...A.....----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     8    -------------------------------------------..............A.........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_276278

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_1030   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.8% (277/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_1030   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_1030   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1030   271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.8% (277/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_1030   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_90496

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACAGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACAGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1031   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.6% (225/243)  IGHV4-34*01  49   ................................G...T..................G...........................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  L  S  L  D  M  S  K  K 
                    Query_1031   91   TGGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGCGTCTCCTTATCATTAGACATGTCCAAGAAG  180
V  92.6% (225/243)  IGHV4-34*01  139  .............................C..................C..A.......A...A..A.....G......C.........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  V  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y 
                    Query_1031   181  CAGTTCTCCGTGAAGGTGACGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAACAGTAAAGGGGGTTATTACTGTCTAC  270
V  92.6% (225/243)  IGHV4-34*01  229  .........C.....C...GC..........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  20   --------------------------------------------------------------------------..........------  29

                                      -------------------->                                 
                                       Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1031   271  CAGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  100.0% (40/40)   IGHJ6*02     23   --------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_131509

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           294     6e-82
IGHD2-21*01                                                                                           10.3    117  
IGHJ4*01                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-21*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACGCGGCATGGCGGCA	ATTCC	TA	TTGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACGCGGCATGGCGGCAATTCCTATTGTCTGC	ARGRGMAAIPIVC	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	216	28	0	88.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  T  Y  Y  Y  S  W  I  R  L  P  P  G  Q  G  L  E 
                    Query_1032   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTACTTACTATTACTCCTGGATCCGGCTGCCCCCAGGGCAGGGACTGGAA  90
V  88.5% (216/244)  IGHV4-59*01  49   .......................................A...G......C.GGAG...........A..........A..........G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  W  Y  T  H  Y  S  G  D  T  N  Y  N  P  S  L  K  S  R  L  I  I  S  V  D  T  S  K  I 
                    Query_1032   91   TGGATTTGGTATACTCATTACAGTGGGGACACCAACTACAACCCCTCCCTCAAGAGTCGACTCATCATATCAGTAGACACGTCCAAGATC  180
V  88.5% (216/244)  IGHV4-59*01  139  ......G......TCT...........AG...............................G...C.......................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       L  L  S  L  G  L  S  S  V  T  V  A  D  S  A  V  Y  L  C  A  R  G  R  G  M  A  A  I  P  I 
                    Query_1032   181  CTGCTCTCCCTGGGGCTGAGCTCTGTGACCGTGGCGGACTCGGCCGTGTATTTGTGTGCGAGAGGACGCGGCATGGCGGCAATTCCTATT  270
V  88.5% (216/244)  IGHV4-59*01  229  .A.T........AA.................CT......A............AC..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*01  24   ---------------------------------------------------------------------------------.....----  28
J  90.2% (37/41)    IGHJ4*01     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                 
                                       V  C  W  G  H  G  T  L  V  T  V  S  S 
                    Query_1032   271  GTCTGCTGGGGCCACGGAACCCTTGTCACCGTCTCCTCA  309
J  90.2% (37/41)    IGHJ4*01     9    .A..A.........A........G...............  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_131508

Length=317
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           310     1e-86
IGHD1-1*01                                                                                            10.3    111  
IGHJ1*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TG	ACGAC	CTAA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGACGACCTAAAC	AKDDDLN	240	260	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	20	4	0	83.3
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	125	24	21	3	0	87.5
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	232	215	17	0	92.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  D  N  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I  
                    Query_1033   16   GTGCAGCCTCTGGATTCACCTTTGATAACTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAACCATTA  105
V  92.7% (215/232)  IGHV3-23*01  65   .......................AGC.G...........G...........................................G.T....  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  V  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  S  T  L  Y  L  
                    Query_1033   106  GTGGTAGTGGAGTTACCACATACTATGCAGACTCCGTAAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAGCACGCTGTACCTGC  195
V  92.7% (215/232)  IGHV3-23*01  155  ..........T.G..G.........C...........G.....................................A.........T....  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----CDR3-IMGT----->                         
                                      Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  D  D  L  N  W  G  Q  G  T  L  V  T  
                    Query_1033   196  AAATGAACAGCCTGAGAGCCGACGACACGGCCGTTTATTACTGCGCGAAAGATGACGACCTAAACTGGGGCCAGGGCACCCTGGTCACCG  285
V  92.7% (215/232)  IGHV3-23*01  245  ......................G...........A........T........--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (5/5)     IGHD1-1*01   13   ------------------------------------------------------.....-------------------------------  17
J  100.0% (36/36)   IGHJ1*01     17   ---------------------------------------------------------------...........................  43

                                               
                                      V  S  S  
                    Query_1033   286  TCTCCTCAG  294
J  100.0% (36/36)   IGHJ1*01     44   .........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30621390


Query= Query_90272

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           336     1e-94
IGHD3-10*01                                                                                           39.1    3e-07
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	G	ACTATGGAACGGGGAGTTATTATAAC	AAGACCC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACTATGGAACGGGGAGTTATTATAACAAGACCCATGGACGTC	AKTMERGVIITRPMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  S  F  S  H  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1034   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCAGCTTCAGTCACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-30*18  47   ........................C...........C.......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  A  Y  D  E  S  F  K  S  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1034   91   AGTGGGTGGCAGTTATAGCATATGATGAAAGTTTTAAATCTTACGCAGCCTCCGTGAAGGGCCGATTTACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-30*18  137  .................T.........G....AA.....AC..T....A..................C......................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  K  T  M  E  R  G  V  I  
                    Query_1034   181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGATGAGGACACGGCTGTGTATTATTGTGCGAAGACTATGGAACGGGGAGTTATTA  270
V  93.5% (231/247)  IGHV3-30*18  227  ...A................................C.....................C........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.3% (24/26)    IGHD3-10*01  6    --------------------------------------------------------------------.......TT.............  27

                                      T------------------>                                 
                                      I  T  R  P  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1034   271  TAACAAGACCCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  323
D  92.3% (24/26)    IGHD3-10*01  28   ....-------------------------------------------------  31
J  97.6% (41/42)    IGHJ6*02     21   -----------......................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_28089

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD2-2*01                                                                                            23.8    0.012 
IGHJ5*01                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATG	GGATATTGTAGCAGT	GTCATCTGTGATGGACCT	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGATATTGTAGCAGTGTCATCTGTGATGGACCTGACTCC	ARHMGYCSSVICDGPDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  T  F  G  T  Y
                    Query_1035   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTGGCACCTA  90
V  94.8% (276/291)  IGHV5-51*01  6    ....................................C........................A...............G....AC..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  K  Y  S  P
                    Query_1035   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGAGACGAAATACAGTCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ........G..................................................................T..C.G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1035   181  GTCCTTCCGAGGCCAGGTCACCATATCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  ........A...............C....C...............C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  M  G  Y  C  S  S  V  I  C  D  G  P  D  S  W  G  H  G  T  L  V  T  V
                    Query_1035   271  CATGTATTACTGTGCGAGACATATGGGATATTGTAGCAGTGTCATCTGTGATGGACCTGACTCCTGGGGCCACGGAACCCTGGTCACCGT  360
V  94.8% (276/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  93.3% (14/15)    IGHD2-2*01   2    -------------------------...........T...--------------------------------------------------  16
J  97.5% (39/40)    IGHJ5*01     12   ----------------------------------------------------------..............A.................  43

                                              
                                        S  S  
                    Query_1035   361  CTCCTCAG  368
J  97.5% (39/40)    IGHJ5*01     44   ........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_131501

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           389     2e-110
IGHD3-9*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACACCATACGCCGGGT	TTACGATCTTTTGACTGG	N/A	TACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACACCATACGCCGGGTTTACGATCTTTTGACTGGTACCTTGACTCC	ARGHHTPGLRSFDWYLDS	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  R  Y 
                    Query_1036   2    CAGCTGGTGCAGTCTGGAGGTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACGTTTAGCAGATAT  91
V  93.1% (269/289)  IGHV1-18*01  7    ...................C...G.....................................................C....C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  K  N  G  N  T  N  Y  A  Q 
                    Query_1036   92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTAAAAATGGAAACACAAATTACGCACAG  181
V  93.1% (269/289)  IGHV1-18*01  97   ........C....................................................C.T.C.....T........C..T......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  V  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  F  D  D  T  A 
                    Query_1036   182  AAGGTCCAGGGAAGAGTCACCATGACGACAGACACATCCACGAGTACAGCCTACATGGAGCTGCGGAGCCTGAGATTTGACGACACGGCC  271
V  93.1% (269/289)  IGHV1-18*01  187  ...C.......C..............C.................C..................A............C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       L  Y  F  C  A  R  G  H  H  T  P  G  L  R  S  F  D  W  Y  L  D  S  W  G  Q  G  T  L  V  T 
                    Query_1036   272  CTGTATTTCTGTGCGAGAGGACACCATACGCCGGGTTTACGATCTTTTGACTGGTACCTTGACTCCTGGGGCCAGGGAACCCTGGTCACC  361
V  93.1% (269/289)  IGHV1-18*01  277  G......A...........-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  94.4% (17/18)    IGHD3-9*01   4    ------------------------------------.......A..........------------------------------------  21
J  95.7% (44/46)    IGHJ4*02     3    ------------------------------------------------------...T......A.........................  38

                                                
                                       V  S  S  
                    Query_1036   362  GTCTCCTCAG  371
J  95.7% (44/46)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_131500

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           427     9e-122
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_1037   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTA  90
V  97.2% (281/289)  IGHV5-51*03  6    ..............................................................................C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_1037   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAATGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  97.2% (281/289)  IGHV5-51*03  96   ..........................................G............................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1037   181  GTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.2% (281/289)  IGHV5-51*03  186  ........................C....C....A..................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1037   271  CATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  97.2% (281/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (15/15)   IGHD6-19*01  4    ----------------------------------...............----------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   ----------------------------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_131502

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGTCCCGACTGAACTACGGCATGGACGTC	ARLMSRLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  S  N  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_1038   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATCAGCAATTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G.........T.G................A............................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1038   91   TGGATTGAGTACATCTATTACAGGGGGAGTCCCAATAACGACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G...T...........T.....CA....CT..A..................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_1038   181  CAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTAATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  .............A.C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  96.0% (48/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1038   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  309
J  96.0% (48/50)    IGHJ6*02     24   ...................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_145204

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     2e-124
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGCCTACTTTCTTAGTTGGGGTTACTCTGGTA	GTATAACAGCAGCTGG	CGAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTAC	ARHAYFLSWGYSGSITAAGEIDY	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	285	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  A  T  Y
                    Query_1039   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTGCCACCTA  90
V  97.9% (285/291)  IGHV5-51*01  6    ....................................C........................................G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_1039   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  97.9% (285/291)  IGHV5-51*01  96   ............................................................................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_1039   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  97.9% (285/291)  IGHV5-51*01  186  .........................................................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        M  Y  Y  C  A  R  H  A  Y  F  L  S  W  G  Y  S  G  S  I  T  A  A  G  E  I  D  Y  W  G  Q
                    Query_1039   271  CATGTATTACTGTGCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTACTGGGGCCA  360
V  97.9% (285/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  93.8% (15/16)    IGHD6-13*01  3    -----------------------------------------------------.....G..........---------------------  18
J  100.0% (42/42)   IGHJ4*02     7    --------------------------------------------------------------------------................  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_1039   361  GGGAACCCTGGTCACCGTCTCCTCAG  386
J  100.0% (42/42)   IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_23884

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           410     1e-116
IGHD1-1*01                                                                                            10.3    135   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAACG	GGTAACCCCATATCGCGGC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTAT	ARGTGNPISRLGY	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	24	0	0	100
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	104	10	0	91.2
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	294	278	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  
                    Query_1040   3    AGATGCAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCA  92
V  94.6% (278/294)  IGHV1-46*01  2    ..G...................G.C.................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  A  G  S  T  N  Y  
                    Query_1040   93   GCTACTATGTGCACTGGGTACGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGCTGGTAGCACAAATTACG  182
V  94.6% (278/294)  IGHV1-46*01  92   ........A..........G....................................................G...........GC....  181
                                      S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  G  T  V  Y  L  D  L  S  S  L  K  S  G  D  
                    Query_1040   183  CACAGAAATTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGGGCACAGTCTACTTGGACCTGAGCAGCCTTAAATCTGGCGACA  272
V  94.6% (278/294)  IGHV1-46*01  182  .......G.......................................A...........A....G...........G.G.....AG....  271
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  A  V  Y  Y  C  A  R  G  T  G  N  P  I  S  R  L  G  Y  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_1040   273  CGGCCGTGTATTACTGTGCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  362
V  94.6% (278/294)  IGHV1-46*01  272  ........................------------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                    
D  100.0% (5/5)     IGHD1-1*01   11   ------------------------.....-------------------------------------------------------------  15
J  92.9% (39/42)    IGHJ4*02     7    ------------------------------------------------...A...C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_232916

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           372     2e-105
IGHD3-3*01                                                                                            44.9    5e-09 
IGHJ5*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCCA	TATTACGATTTTTGGAGTGGTTA	CCCAGGCCTCA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGATCCATATTACGATTTTTGGAGTGGTTACCCAGGCCTCACC	TTDPYYDFWSGYPGLT	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	247	9	0	96.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1041   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAATGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.5% (247/256)  IGHV3-15*01  47   .......T......................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  N  K  T  D  G  G  T  A  A  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_1041   91   AGTGGGTTGGCCGTATTAAAAACAAAACTGATGGTGGGACAGCAGCCTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  96.5% (247/256)  IGHV3-15*01  137  .....................G...................A...A............................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  R  N  T  V  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  D  P  Y  Y  D  
                    Query_1041   181  ATTCAAGAAACACGGTCTATTTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATCCATATTACGATT  270
V  96.5% (247/256)  IGHV3-15*01  227  ......A.......C.G...C.......................................................--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (23/23)   IGHD3-3*01   2    --------------------------------------------------------------------------------..........  11

                                      R3-IMGT------------------>                                  
                                      F  W  S  G  Y  P  G  L  T  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_1041   271  TTTGGAGTGGTTACCCAGGCCTCACCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  330
D  100.0% (23/23)   IGHD3-3*01   12   .............-----------------------------------------------  24
J  97.2% (35/36)    IGHJ5*02     16   ------------------------...............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_18301

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            403     9e-115
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	269	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	154	27	27	0	0	100
FR3-IMGT	155	268	114	113	1	0	99.1
CDR3-IMGT (germline)	269	275	7	7	0	0	100
Total	N/A	N/A	274	266	8	0	97.1


Alignments

                                     <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                      L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  I  R 
                    Query_1042  2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGATCAGG  91
V  97.1% (266/274)  IGHV6-1*01  31   ........G...T.G.......................................G......G....AG......................  120
                                      L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                     ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                      Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 
                    Query_1042  92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGA  181
V  97.1% (266/274)  IGHV6-1*01  121  ..........................................................................................  210
                                      Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                     --------------------------FR3-IMGT----------------------------------------------------><--
                                      I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_1042  182  ATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCA  271
V  97.1% (266/274)  IGHV6-1*01  211  .........A................................................................................  300
                                      I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                     --------CDR3-IMGT--------->                                  
                                      R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1042  272  AGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  332
V  97.1% (266/274)  IGHV6-1*01  301  ....---------------------------------------------------------  304
                                      R                                                           
J  97.9% (46/47)    IGHJ3*02    4    --------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_51564

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           343     2e-96
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCGGACGAATA	ACTATGGTTCGGGGAG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCGGACGAATAACTATGGTTCGGGGAGCCCCTTTGACGAC	ARHRTNNYGSGSPFDD	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  D  S  T  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_1043   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCGATAGTACTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.6% (235/251)  IGHV4-39*01  49   ..........................................AG.....G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  I  H  Y  N  P  S  L  Q  S  R  V  T  I  F  V  D  T  S 
                    Query_1043   91   CTGGAGTGGATCGGCAGTATCTATTATAGTGGGAGCATACACTACAATCCGTCCCTCCAGAGTCGAGTCACCATATTCGTGGACACGTCC  180
V  93.6% (235/251)  IGHV4-39*01  139  ...........T..G......................CCT.......C.........A..................C...A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  T  D  T  A  V  Y  Y  C  A  R  H  R  T  N  N  Y  G 
                    Query_1043   181  AAGAACCAGTTCTCCCTGAGGTTGAGCTCTGTGACCGCCACAGACACGGCTGTGTATTACTGTGCGAGACATCGGACGAATAACTATGGT  270
V  93.6% (235/251)  IGHV4-39*01  229  ...................A.C.................G...............................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (16/16)   IGHD3-10*01  6    ----------------------------------------------------------------------------------........  13

                                      GT------------------>                                  
                                       S  G  S  P  F  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1043   271  TCGGGGAGCCCCTTTGACGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  100.0% (16/16)   IGHD3-10*01  14   ........-----------------------------------------------  21
J  97.7% (43/44)    IGHJ4*02     5    -----------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_232914

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           353     9e-100
IGHD3-10*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAATGGGGAGTT	TTACTTTGGTTCGGG	AAAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAATGGGGAGTTTTACTTTGGTTCGGGAAATTTTGACTAC	ARANGEFYFGSGNFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  E  S  Y  Y  W  S  R  L  R  Q  P  P  G  K  G 
                    Query_1044   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGAAAGTTACTACTGGAGCCGGCTCCGGCAGCCCCCAGGGAAGGGA  90
V  95.2% (238/250)  IGHV4-61*01  49   .........................................C....GT...............T..A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  Y  S  G  R  S  N  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S 
                    Query_1044   91   CTGGAGTGGATTGGGTATATCTTTTACAGTGGGAGATCCAACTACAACCCCTCCCTCAACAGTCGTGTCACCATATCAGTAGACACGTCC  180
V  95.2% (238/250)  IGHV4-61*01  139  ......................A............CA......................G.....A........................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  N  G  E  F  Y  F 
                    Query_1044   181  AAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCTGACACGGCCGTGTATTACTGTGCGAGAGCTAATGGGGAGTTTTACTTT  270
V  95.2% (238/250)  IGHV4-61*01  229  .....................C...................G............................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  93.3% (14/15)    IGHD3-10*01  4    -----------------------------------------------------------------------------------.....A.  10

                                      GT------------------>                                  
                                       G  S  G  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1044   271  GGTTCGGGAAATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  93.3% (14/15)    IGHD3-10*01  11   ........-----------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     6    ------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_169583

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           343     2e-96
IGHD3-22*01                                                                                           39.1    2e-07
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCTCTG	ATTACTATGAAAGTAGTGGTTAT	N/A	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCTCTGATTACTATGAAAGTAGTGGTTATGACCTC	ARPSDYYESSGYDL	242	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	28	27	1	0	96.4
CDR1-IMGT	29	52	24	21	3	0	87.5
FR2-IMGT	53	103	51	47	4	0	92.2
CDR2-IMGT	104	127	24	21	3	0	87.5
FR3-IMGT	128	241	114	111	3	0	97.4
CDR3-IMGT (germline)	242	247	6	6	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        S  L  R  L  S  C  G  A  S  G  F  T  F  N  Y  Y  S  L  N  W  V  R  Q  A  P  G  K  G  L  E
                    Query_1045   1    GTCCCTGAGACTCTCCTGTGGAGCCTCTGGATTCACCTTCAATTACTATAGCTTGAACTGGGTCCGCCAGGCTCCCGGGAAGGGTCTGGA  90
V  94.3% (233/247)  IGHV3-21*01  48   ....................C....................G.AG.......A......................A........G.....  137
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E

                                      ------------><-------CDR2-IMGT------><----------------------------------------------------
                                        W  L  S  S  I  S  S  H  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K
                    Query_1045   91   GTGGCTCTCATCCATTAGCAGTCATAGTAGTTACATATATTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAA  180
V  94.3% (233/247)  IGHV3-21*01  138  ....G.............T...AG...............C..................................................  227
                                        W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K

                                      FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT---
                                        N  S  L  Y  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  S  D  Y  Y  E  S  S
                    Query_1045   181  GAACTCACTGTATCTGCAAATGAACAACCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGACCCTCTGATTACTATGAAAGTAG  270
V  94.3% (233/247)  IGHV3-21*01  228  ..........................G........................G...............-----------------------  294
                                        N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                        
D  95.7% (22/23)    IGHD3-22*01  3    --------------------------------------------------------------------------..........T.....  18

                                      ------------>                                  
                                        G  Y  D  L  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_1045   271  TGGTTATGACCTCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  317
D  95.7% (22/23)    IGHD3-22*01  19   .......----------------------------------------  25
J  95.0% (38/40)    IGHJ5*02     12   -------....C.................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_301311

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD7-27*01                                                                                           18.0    0.67  
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CCCCGCCGCGGCA	AACTGGGGA	T	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACCCCGCCGCGGCAAACTGGGGATTGATGCTTTTCATATC	AGPRRGKLGIDAFHI	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	109	5	0	95.6
CDR3-IMGT (germline)	292	297	6	5	1	0	83.3
Total	N/A	N/A	293	280	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_1046   5    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTCAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  94
V  95.6% (280/293)  IGHV5-51*03  2    ....G..........................G..........................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  F  I  G  W  V  R  Q  T  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  
                    Query_1046   95   GTTACTTCATCGGCTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACA  184
V  95.6% (280/293)  IGHV5-51*03  92   .C....GG...................T.........................................G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_1046   185  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  95.6% (280/293)  IGHV5-51*03  182  ................................................G.........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      S  G  I  Y  Y  C  A  G  P  R  R  G  K  L  G  I  D  A  F  H  I  W  G  Q  G  T  M  V  T  V  
                    Query_1046   275  GCGGCATATATTATTGTGCGGGACCCCGCCGCGGCAAACTGGGGATTGATGCTTTTCATATCTGGGGCCAAGGGACAATGGTCACCGTCT  364
V  95.6% (280/293)  IGHV5-51*03  272  C..C...G.....C......A..-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (9/9)     IGHD7-27*01  3    ------------------------------------.........---------------------------------------------  11
J  98.0% (49/50)    IGHJ3*02     1    ----------------------------------------------..........G.................................  44

                                            
                                      S  S  
                    Query_1046   365  CTTCAG  370
J  98.0% (49/50)    IGHJ3*02     45   ......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_217468

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           364     5e-103
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTAGA	TCAGGA	TGTACTAATACCAGCTGCT	CTCCGGAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTAGATCAGGATGTACTAATACCAGCTGCTCTCCGGATCTACTACTACGGTTTGGACGTC	AVDQDVLIPAALRIYYYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	242	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  V  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_1047   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTGTTTACTACTGGAGCTGGATCCGACAGCCCCCAGGGAAGGGA  90
V  96.4% (242/251)  IGHV4-61*08  49   .................................................G.....................G..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  S  G  I  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1047   91   CTGGAGTGGATTGGGTATATCTATAACAGTGGGATCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  96.4% (242/251)  IGHV4-61*08  139  ........................T.........G.......................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       T  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  V  D  Q  D  V  L  I  P 
                    Query_1047   181  ACGAACCAGTTCTCCCTGAGGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGGTAGATCAGGATGTACTAATACCA  270
V  96.4% (242/251)  IGHV4-61*08  229  .A.................A.....G........................................AG...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.5% (17/19)    IGHD2-2*01   8    -----------------------------------------------------------------------------....G..G.....  20

                                      CDR3-IMGT-------------------------->                                 
                                       A  A  L  R  I  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1047   271  GCTGCTCTCCGGATCTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  339
D  89.5% (17/19)    IGHD2-2*01   21   ......---------------------------------------------------------------  26
J  98.2% (54/55)    IGHJ6*02     8    --------------.............A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_217463

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           279     3e-77
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	216	28	6	86.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_1048   4    CCCTGAGACTCTCCTGTGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.4% (216/250)  IGHV4-34*01  50   .....TCC...A....C.....C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_1048   94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.4% (216/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_1048   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.4% (216/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_1048   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_217462

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     1e-124
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_1049   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  98.3% (284/289)  IGHV5-51*01  6    .............................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_1049   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1049   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1049   271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_1049   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_217461

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           353     1e-99
IGHD1-26*01                                                                                           14.1    9.3  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACGGGG	TAGTGGG	GCCGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGGGTAGTGGGGCCGGCTGGTTCGACCCC	ARGSGAGWFDP	292	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	43	8	0	84.3
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	98	16	0	86
CDR3-IMGT (germline)	292	293	2	2	0	0	100
Total	N/A	N/A	290	258	32	0	89


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  M  F  T 
                    Query_1050   4    CAGGTTCAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATGTTTACC  93
V  89.0% (258/290)  IGHV1-18*01  1    .........................C.............................................T..........CC......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  H  W  A  R  Q  A  P  G  Q  G  L  E  W  L  G  R  I  S  G  Y  N  G  N  T  N  Y 
                    Query_1050   94   AGTTATGGTATACATTGGGCGCGACAGGCCCCTGGACAAGGCCTTGAGTGGCTGGGACGGATCAGCGGTTACAACGGGAACACAAACTAT  183
V  89.0% (258/290)  IGHV1-18*01  91   ..C........CAGC....T.....................G.........A.....T.........C......T..T............  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  L  Q  D  R  V  I  L  T  I  D  T  S  T  T  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_1050   184  GCACAGAACCTGCAGGACAGAGTCATTCTGACCATAGACACGTCCACGACTACAGCCTACATGGAACTGAGGAGTCTCAGATCTGACGAC  273
V  89.0% (258/290)  IGHV1-18*01  181  ........G..C....G........CCA......C......A.......GC..............G........C..G............  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------CDR3-IMGT----------->                                  
                                       T  A  V  Y  F  C  A  R  G  S  G  A  G  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  T  
                    Query_1050   274  ACGGCCGTCTACTTCTGTGCACGGGGTAGTGGGGCCGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCACAG  358
V  89.0% (258/290)  IGHV1-18*01  271  ........G..T.A......-----------------------------------------------------------------  290
                                       T  A  V  Y  Y  C  A                                                                 
D  100.0% (7/7)     IGHD1-26*01  5    --------------------------.......----------------------------------------------------  11
J  95.7% (45/47)    IGHJ5*02     5    --------------------------------------...................................C.......T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_217460

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            346     2e-97
IGHD3-10*01                                                                                           10.3    116  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGG	CGGGG	GGCCGACCGTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGGCGGCGGGGGGCCGACCGTGTTTGACTAC	GRGGGGPTVFDY	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	247	7	6	1	0	85.7
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  S  K  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_1051   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGTAGTAAATGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  94.7% (234/247)  IGHV4-4*02   49   ...............................G..................C.......G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  Y  H  S  G  S  S  N  Y  S  P  S  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_1051   91   GAGTGGATTGGGGATATCTATCATAGTGGGAGCTCCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  94.7% (234/247)  IGHV4-4*02   139  ..............A..................A.........A..........A...................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  K  L  T  S  V  T  A  A  G  T  A  V  Y  Y  C  G  R  G  G  G  G  P  T  V  F 
                    Query_1051   181  AATCAGTTCTCCCTGAAGCTGACATCGGTGACCGCCGCGGGCACGGCCGTGTATTACTGTGGGAGAGGCGGCGGGGGGCCGACCGTGTTT  270
V  94.7% (234/247)  IGHV4-4*02   229  ..C...................GC..T.............A....................C.....-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (5/5)     IGHD3-10*01  15   -----------------------------------------------------------------------.....--------------  19
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1051   271  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (43/43)   IGHJ4*02     9    ........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_217467

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD3-16*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	TGGGGGA	TGGCGACAATTCTGACATTTCG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTC	TRVGDGDNSDISYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  I  F
                    Query_1052   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTTAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTAGCATCTT  90
V  94.8% (274/289)  IGHV5-51*01  6    ...........................G.................................................G.....C..G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  P  D  I  K  Y  S  P
                    Query_1052   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACCCTGATATCAAATACAGTCC  180
V  94.8% (274/289)  IGHV5-51*01  96   ....................................................A.................T......C..G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1052   181  GTCCTTCCAAGGCCAGGTCTCCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTTTGAAGGCCTCGGACACCGC  270
V  94.8% (274/289)  IGHV5-51*01  186  ...................A.................................................CC...................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  T  R  V  G  D  G  D  N  S  D  I  S  Y  G  M  D  V  W  G  Q  G  T  K  V  T  V
                    Query_1052   271  CATCTATTACTGTACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTCTGGGGCCAAGGGACCAAGGTCACCGT  360
V  94.8% (274/289)  IGHV5-51*01  276  ...G.........G.....-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-16*01  17   --------------------.......---------------------------------------------------------------  23
J  95.8% (46/48)    IGHJ6*02     15   -------------------------------------------------.....T.........................C.........  55

                                             
                                        S  S 
                    Query_1052   361  CTCCTCA  367
J  95.8% (46/48)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_217466

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            315     5e-88
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCATCTACCAACAC	CTGGTAC	TCGGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCATCTACCAACACCTGGTACTCGGGGCTTTGGCTAC	ASHLPTPGTRGFGY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  I  S  F  G  S  I  T  S  A  N  W  W  S  W  V  R  Q  P  P  G  R  G  L 
                    Query_1053   1    ACCCTGTCCCTCACCTGCGCTATTTCTTTTGGCTCCATCACCAGTGCTAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAGGGGGCTG  90
V  91.0% (223/245)  IGHV4-4*02   49   .....................G.C...GG...........G....AG...C...............................A.......  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  Y  H  G  G  N  T  H  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  K  S  N 
                    Query_1053   91   GAGTGGATTGGGGAAGTATATCATGGTGGGAACACGCACTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTGGACAAGTCCAAT  180
V  91.0% (223/245)  IGHV4-4*02   139  ...............A.C......A......G...CA...................G....................A...........G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  P  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  H  L  P  T  P  G  T  R 
                    Query_1053   181  AATCAGTTCTCCCCGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGCCATCTACCAACACCTGGTACTCGG  270
V  91.0% (223/245)  IGHV4-4*02   229  ..C..........T..A.................................G..............-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  G  Y  W  G  Q  G  A  L  V  S  V  S  S  
                    Query_1053   271  GGCTTTGGCTACTGGGGCCAGGGAGCCCTGGTCAGCGTCTCCTCAG  316
J  93.2% (41/44)    IGHJ4*02     5    --.....A................A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_217465

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           341     5e-96
IGHD2-15*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATCGCGCTT	TATTGTAGTGGTGGTCCCTGCTAC	CCCGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATCGCGCTTTATTGTAGTGGTGGTCCCTGCTACCCCGCCTAC	ARIALYCSGGPCYPAY	232	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	11	0	0	100
CDR1-IMGT	19	42	24	21	3	0	87.5
FR2-IMGT	43	93	51	50	1	0	98
CDR2-IMGT	94	117	24	23	1	0	95.8
FR3-IMGT	118	231	114	113	1	0	99.1
CDR3-IMGT (germline)	232	237	6	6	0	0	100
Total	N/A	N/A	230	224	6	0	97.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  T  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  I  S  Y  I  
                    Query_1054   8    GTGCAGCCTCTGGATTCACATTTAGTACTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGATTTCATACATTA  97
V  97.4% (224/230)  IGHV3-48*03  65   ...................C..C....G.................................................G............  154
                                         A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  S  G  S  T  M  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  F  L  
                    Query_1054   98   GTAGTAGTGGTAGTACCATGTACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTTTCTGC  187
V  97.4% (224/230)  IGHV3-48*03  155  ...................A................................................................A.....  244
                                      S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  I  A  L  Y  C  S  G  G  P  C  Y  P  A  
                    Query_1054   188  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAATCGCGCTTTATTGTAGTGGTGGTCCCTGCTACCCCGCCT  277
V  97.4% (224/230)  IGHV3-48*03  245  ..................................................----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  91.7% (22/24)    IGHD2-15*01  5    -----------------------------------------------------------...............AG.......-------  28
J  100.0% (38/38)   IGHJ4*02     11   ----------------------------------------------------------------------------------------..  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1054   278  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (38/38)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_217464

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGAA	GTGGATACA	ACTTCGGTCAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGAAGTGGATACAACTTCGGTCATAACTGGTTCGACCCC	ARDPTGSGYNFGHNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  H  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1055   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATAAGTCATTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  93.5% (229/245)  IGHV4-59*01  49   ...............................G......C...AG............C................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  T  S  V  D  T  T  K  N 
                    Query_1055   91   TGGATTGGATATATCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCACGTCAGTAGACACGACCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G......T...................................................TA............T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  S  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_1055   181  CAGTTCTCCCTGAGCCTCAGTTCTGTGACCGTTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCCTACCGGAAGTGGATACAACTTC  270
V  93.5% (229/245)  IGHV4-59*01  229  .............AG..G..C..........C.................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD5-18*01  1    ----------------------------------------------------------------------------.........-----  9

                                      -------------------->                                  
                                       G  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1055   271  GGTCATAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTAACCGTCTCCTCAG  325
J  98.0% (48/49)    IGHJ5*02     3    ------...................................C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_273986

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           285     4e-79
IGHD6-19*01                                                                                           35.3    3e-06
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	A	TATAGCAGTGGCTGGTAC	GGGACCG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGAATATAGCAGTGGCTGGTACGGGACCGTTGACTAC	AREYSSGWYGTVDY	232	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	11	0	0	100
CDR1-IMGT	19	42	24	22	2	0	91.7
FR2-IMGT	43	93	51	44	7	0	86.3
CDR2-IMGT	94	117	24	17	7	0	70.8
FR3-IMGT	118	231	114	106	8	0	93
CDR3-IMGT (germline)	232	239	8	7	1	0	87.5
Total	N/A	N/A	232	207	25	0	89.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  D  F  F  M  S  W  I  R  Q  S  P  G  K  G  L  E  W  I  A  Y  I  
                    Query_1056   8    GTGCAGCCTCTGGATTCACCTTCAGTGACTTCTTCATGAGTTGGATCCGCCAGAGTCCGGGGAAGGGGCTGGAGTGGATTGCATATATTG  97
V  89.2% (207/232)  IGHV3-11*01  65   ..............................A..A......C............GC...A..................G..T....C...A  154
                                         A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      G  G  S  G  T  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  A  R  D  N  D  K  K  S  L  Y  L  
                    Query_1056   98   GCGGTAGTGGAACCACCATCTACTACGCAGACTCTGTGAAGGGCCGATTCACCATCGCCAGGGACAACGACAAAAAATCACTGTATCTGC  187
V  89.2% (207/232)  IGHV3-11*01  155  .TA.......T.GT.....A....................................T............C...G..C.............  244
                                      S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      Q  M  N  S  L  R  A  E  D  T  G  L  Y  Y  R  A  R  E  Y  S  S  G  W  Y  G  T  V  D  Y  W  
                    Query_1056   188  AAATGAACAGCCTGAGAGCCGAAGACACGGGCCTGTATTACCGTGCGCGAGAATATAGCAGTGGCTGGTACGGGACCGTTGACTACTGGG  277
V  89.2% (207/232)  IGHV3-11*01  245  ......................G.......C.G........T.....A....--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (18/18)   IGHD6-19*01  4    -----------------------------------------------------..................-------------------  21
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------------------------------------............  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_1056   278  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_273987

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            325     3e-91
IGHD1-26*01                                                                                           12.2    32   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGTTTC	TATAGT	CGCGTTGGCTGCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTTTCTATAGTCGCGTTGGCTGCTTCTTTGACTAC	ARCFYSRVGCFFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  E  F  T  F  S  T  Y  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1057   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGAATTCACCTTTAGTACCTACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (228/248)  IGHV3-7*01   47   .....................C........G..............G...T.GG.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  R  H  D  E  T  V  K  T  Y  V  D  S  V  K  G  R  F  T  T  S  R  D  N  A  
                    Query_1057   91   AGTGGGTGGCAAACATAAGGCACGATGAAACTGTGAAAACCTATGTGGACTCTGTGAAGGGCCGATTCACCACGTCCAGAGACAACGCCA  180
V  91.9% (228/248)  IGHV3-7*01   137  ..........C.......A...A....G..G..A....TA................................TC................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  C  F  Y  S  R  V  G  
                    Query_1057   181  AGAACTCACTGTATCTGCAAATGGATAGCCTGAGACCTGAGGACACGGCTGTGTATTACTGTGCGAGATGTTTCTATAGTCGCGTTGGCT  270
V  91.9% (228/248)  IGHV3-7*01   227  .......................A.C.........G.C..............................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------......----------  8

                                      ------------->                                  
                                      C  F  F  D  Y  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_1057   271  GCTTCTTTGACTACTGGGGCCAGGGAGTGTTGGTCACCGTCTCCTCAG  318
J  90.9% (40/44)    IGHJ4*02     5    ----......................ACCC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_273984

Length=412
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*11                                                                                           399     3e-113
IGHD2-2*01                                                                                            18.0    0.70  
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*11	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCCACCCGCTGTTGTACTTC	TACCAACTGCTA	CAGGGGGGA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCCACCCGCTGTTGTACTTCTACCAACTGCTACAGGGGGGAACAACTGGTTCGACCCC	ARGPPAVVLLPTATGGNNWFDP	290	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	71	4	0	94.7
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	106	8	0	93
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	275	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  D  T  F  S 
                    Query_1058   2    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGTAAGGCTTCTGGAGACACCTTCAGC  91
V  93.2% (275/295)  IGHV1-69*11  1    .....C.................G...............................A.........C.............G..........  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  L  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  T  I  I  P  V  L  G  T  A  N  Y 
                    Query_1058   92   AGCTATGGTCTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTGGAGTGGATGGGAACCATCATCCCTGTCCTTGGTACAGCGAACTAC  181
V  93.2% (275/295)  IGHV1-69*11  91   .......C.A..................................T.............GG.........A.............A......  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  R  F  Q  G  R  L  T  M  T  A  D  V  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_1058   182  GCACAGAGGTTCCAGGGCAGACTCACGATGACCGCGGACGTTTCCACGAGCACAGCCTACATGGAGCTGAGAAGCCTAAGATCTGACGAC  271
V  93.2% (275/295)  IGHV1-69*11  181  .......A.............G.......T..........AA.............................C.....G........G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------------------CDR3-IMGT--------------------------->      
                                       T  A  V  Y  Y  C  A  R  G  P  P  A  V  V  L  L  P  T  A  T  G  G  N  N  W  F  D  P  W  G 
                    Query_1058   272  ACGGCCGTGTATTACTGTGCGAGAGGTCCACCCGCTGTTGTACTTCTACCAACTGCTACAGGGGGGAACAACTGGTTCGACCCCTGGGGC  361
V  93.2% (275/295)  IGHV1-69*11  271  .........................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  91.7% (11/12)    IGHD2-2*01   16   ----------------------------------------------.....G......--------------------------------  27
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------.......................  23

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_1058   362  CAGGGAACCCTGGTCACCGTCTCCTCAG  389
J  100.0% (51/51)   IGHJ5*02     24   ............................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40393728


Query= Query_273985

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD6-19*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	261	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	20	1	0	95.2
FR3-IMGT	147	260	114	107	7	0	93.9
CDR3-IMGT (germline)	261	267	7	6	1	0	85.7
Total	N/A	N/A	267	250	17	0	93.6


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  
                    Query_1059   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACTTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGC  90
V  93.6% (250/267)  IGHV4-59*01  26   ................T....................C........................AG....T..............A......  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  
                    Query_1059   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCA  180
V  93.6% (250/267)  IGHV4-59*01  116  .................................AT...T...................................A...............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  
                    Query_1059   181  TATCAGTGGACACGTCCAAGAATCAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTA  270
V  93.6% (250/267)  IGHV4-59*01  206  .......A..............C...................G...........................G..T..C...G......---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -CDR3-IMGT--------->                                  
                                      S  G  W  L  A  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1059   271  GTGGGTGGCTGGCTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (8/8)     IGHD6-19*01  11   ----........------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    -------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_273983

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD2-2*02                                                                                            18.0    0.64 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCAAGCAGTCGGGATTGTCGAAGTAATGC	CTGCTATAC	GGAATCAGATCTTTACCTCAAT	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCAAGCAGTCGGGATTGTCGAAGTAATGCCTGCTATACGGAATCAGATCTTTACCTCAATTACGATATGGGCGTC	ASSSRDCRSNACYTESDLYLNYDMGV	240	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	242	3	3	0	0	100
Total	N/A	N/A	239	223	16	0	93.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  S  I  R  T  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_1060   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCATCAGGACTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  93.3% (223/239)  IGHV4-59*01  50   .....TCC...A..................G.........T.G.........................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N  
                    Query_1060   94   GGATTGGGTATATCTATTACAGTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGGCAGACACGTCCAAGAACC  183
V  93.3% (223/239)  IGHV4-59*01  140  ...........................G..........................................A.T.................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><---------------------------------
                                      H  F  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  S  S  R  D  C  R  S  N  A  
                    Query_1060   184  ACTTCTCCCTGAAGGTGACCTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGCGTCAAGCAGTCGGGATTGTCGAAGTAATGCCT  273
V  93.3% (223/239)  IGHV4-59*01  230  .G............C...G...........................G..T.........-------------------------------  288
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (9/9)     IGHD2-2*02   22   ----------------------------------------------------------------------------------------..  23

                                      -CDR3-IMGT--------------------------------->                                 
                                      C  Y  T  E  S  D  L  Y  L  N  Y  D  M  G  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_1060   274  GCTATACGGAATCAGATCTTTACCTCAATTACGATATGGGCGTCTGGGGCCAAGGGACCACGGTCTCCGTCTCCTCA  350
D  100.0% (9/9)     IGHD2-2*02   24   .......----------------------------------------------------------------------  30
J  93.8% (45/48)    IGHJ6*02     15   -----------------------------....G.....A.........................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_273980

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           329     3e-92
IGHD2-8*01                                                                                            14.1    8.1  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TAATGGT	CCGACTGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGGTCCGACTGAACTACGGCATGGACGTC	ARLMVRLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  L  T  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_1061   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCCTCACCAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCCGGGAAGGGACTGGAA  90
V  93.0% (227/244)  IGHV4-59*08  49   ..................A............G....A...GT..................A.............A..............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  R  P  N  N  N  P  S  L  R  S  R  V  T  I  S  V  D  A  S  K  N 
                    Query_1061   91   TGGATTGAGTATATCTATTACAGAGGGCGTCCCAACAACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACGCGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*08  139  .......G...............T...A.CA.....T...............A.........................A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  V  R  L  N  Y  G  M 
                    Query_1061   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACTAATGGTCCGACTGAACTACGGCATG  270
V  93.0% (227/244)  IGHV4-59*08  229  ...................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD2-8*01   13   ----------------------------------------------------------------.......-------------------  19
J  94.0% (47/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_1061   271  GACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCGTCA  309
J  94.0% (47/50)    IGHJ6*02     24   .............A.....................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_273981

Length=426
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           369     2e-104
IGHD2-21*02                                                                                           14.1    10    
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGCAC	TGTAGTGCTGACT	AATAGGCGCGGACTTACGGGGCCAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCGCACTGTAGTGCTGACTAATAGGCGCGGACTTACGGGGCCAGACTACCACTACTACGGCATGGACGTC	ARERTVVLTNRRGLTGPDYHYYGMDV	290	367	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	70	5	0	93.3
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	17	7	0	70.8
FR3-IMGT	176	289	114	101	13	0	88.6
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	296	266	30	0	89.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  T  A  S  G  Y  T  F  S 
                    Query_1062   2    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCACGGCCTCTGGGTACACCTTTAGC  91
V  89.9% (266/296)  IGHV1-18*01  1    .....T.....G...........................................A...........A...T.....T..........C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  S  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  K  N  G  D  T  K  Y 
                    Query_1062   92   AGTTATAGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCCAAGAACGGAGACACCAAATAT  181
V  89.9% (266/296)  IGHV1-18*01  91   ..C...G.......C.....................................................TT.C..T..TA....A..C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       E  Q  K  F  Q  D  R  I  F  L  T  T  E  T  S  T  S  T  A  Y  M  E  V  T  S  L  R  S  D  D 
                    Query_1062   182  GAGCAGAAGTTCCAGGACAGAATCTTCCTGACCACAGAGACATCCACGAGCACAGCCTACATGGAGGTGACGAGCCTGAGATCTGACGAC  271
V  89.9% (266/296)  IGHV1-18*01  181  .CA......C......G....G..AC.A..........C...........................C...G...................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------------------CDR3-IMGT----------------------------
                                       T  A  V  Y  Y  C  A  R  E  R  T  V  V  L  T  N  R  R  G  L  T  G  P  D  Y  H  Y  Y  G  M 
                    Query_1062   272  ACGGCCGTCTATTACTGTGCGAGAGAGCGCACTGTAGTGCTGACTAATAGGCGCGGACTTACGGGGCCAGACTACCACTACTACGGCATG  361
V  89.9% (266/296)  IGHV1-18*01  271  ........G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  84.6% (11/13)    IGHD2-21*02  8    --------------------------------...G...G.....---------------------------------------------  20
J  94.9% (56/59)    IGHJ6*02     4    ----------------------------------------------------------------------.....T..........T...  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1062   362  GACGTCTGGGGCCAAGGGACCACTGTCACCGTCTCCTCA  400
J  94.9% (56/59)    IGHJ6*02     24   .......................G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41866416


Query= Query_181880

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           367     6e-104
IGHD6-13*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCGA	GGTATAGCA	ATAACTACTTAGAT	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCGAGGTATAGCAATAACTACTTAGATTTTAACTAC	AARYSNNYLDFNY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	240	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  M  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1063   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTATGTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (240/245)  IGHV3-48*03  47   .............................................GT...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  D  
                    Query_1063   91   AGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGACA  180
V  98.0% (240/245)  IGHV3-48*03  137  .......................................................................................C..  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  I  P  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  A  R  Y  S  N  N  Y  L  
                    Query_1063   181  AGATCCCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGGCGAGGTATAGCAATAACTACTTAG  270
V  98.0% (240/245)  IGHV3-48*03  227  ...A.T...........................................................-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD6-13*01  2    ---------------------------------------------------------------------.........------------  10

                                      ---------->                                  
                                      D  F  N  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1063   271  ATTTTAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (42/43)    IGHJ4*02     6    --...G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_247213

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     3e-93
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1064   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  T  
                    Query_1064   91   AGTGGGTCTCAGCGATTACTGGGAGTGGTAGTAGTACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTACACCA  180
V  92.4% (231/250)  IGHV3-23*01  137  .............T....G...T......G....C.........G......................................A.TT...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  L  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_1064   181  AGAACACGCTGTATCTGCTAATGAACAGCCTTACAGCCGAGGACACGGCCGTCTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  92.4% (231/250)  IGHV3-23*01  227  ..................A............G.G..................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1064   271  ATTCACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_273988

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           327     9e-92
IGHD1-26*01                                                                                           12.2    32   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-26*01	IGHJ4*02	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTAGACCA	AGTGGG	GCTGCGGGGGGAACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTAGACCAAGTGGGGCTGCGGGGGGAACAACTTTGACTAC	ARHVDQVGLRGEQL*L	244	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	230	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  L  G  R  Y  Y  W  G  W  L  R  Q  P  P  G  K  G 
                    Query_1065   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACCCTTGGAAGATACTATTGGGGCTGGCTCCGCCAGCCCCCCGGGAAGGGG  90
V  91.6% (230/251)  IGHV4-39*01  49   ...............................G........G.AG.A.T..T.....C.........A.............A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  H  Y  S  G  S  P  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1065   91   CTGGAGTGGATTGCGAGTATTCATTACAGTGGGAGCCCCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCCGTAGACACGTCC  180
V  91.6% (230/251)  IGHV4-39*01  139  .............G......CT....T.........A.....................................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  H  F  S  L  R  L  R  S  V  T  A  S  D  T  A  V  Y  Y  C  A  R  H  V  D  Q  V  G  L 
                    Query_1065   181  AAGAACCACTTCTCCCTGAGGCTGAGGTCTGTGACCGCCTCAGACACGGCTGTATATTACTGTGCGAGACATGTAGACCAAGTGGGGCTG  270
V  91.6% (230/251)  IGHV4-39*01  229  ........G..........A......C............G.............G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-26*01  6    --------------------------------------------------------------------------------......----  11

                                      GT------------------->                                  
                                       R  G  E  Q  L  *  L  L  G  P  G  K  S  G  H  R  L  L   
                    Query_1065   271  CGGGGGGAACAACTTTGACTACTGGGGCCAGGGAAGTCTGGCCACCGTCTCCTCAG  326
J  93.3% (42/45)    IGHJ4*02     4    -----------........................CC....T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_273989

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           339     2e-95
IGHD3-3*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCACGACTCC	TTACGAT	GACCCACGGAAGGCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCACGACTCCTTACGATGACCCACGGAAGGCATACTTTGACTAC	ARVTTPYDDPRKAYFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1066   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGCCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-30*03  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  P  Y  D  G  S  N  E  Y  Y  A  D  S  V  R  G  R  V  S  I  S  R  D  N  S  
                    Query_1066   91   AGTGGGTGGCCTTTATCCCATATGATGGAAGTAATGAATACTATGCAGACTCCGTGAGGGGCCGAGTCTCCATCTCCAGAGACAATTCCG  180
V  93.6% (233/249)  IGHV3-30*03  137  ..........AG....AT.................A.....................A.......T..A....................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      G  N  T  L  Y  L  H  M  H  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  T  T  P  Y  D  D  
                    Query_1066   181  GGAACACACTGTATCTGCATATGCACAGCCTGAGAGCTGAGGACACGGCTTTGTATTACTGTGCGAGAGTCACGACTCCTTACGATGACC  270
V  93.6% (233/249)  IGHV3-30*03  227  A......G...........A...A..........................G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-3*01   4    -------------------------------------------------------------------------------.......----  10

                                      GT-------------------->                                  
                                      P  R  K  A  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_1066   271  CACGGAAGGCATACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  327
J  97.8% (45/46)    IGHJ4*02     3    -----------...................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_141997

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     3e-93
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGGGTCCT	TATAGTGGGAGC	CCGCAAGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACTTC	AKPGPYSGSPQGYFDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1067   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTTCGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (230/248)  IGHV3-23*01  47   .............................................G..AT........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  T  E  T  G  R  N  S  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  
                    Query_1067   91   AGTGGGTCTCAACTATTACTGAGACTGGTCGTAATTCATACTACGCAGACTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCA  180
V  92.7% (230/248)  IGHV3-23*01  137  ...........G......G..GT.G....G...GCA............................G....C...............T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  G  P  Y  S  G  S  
                    Query_1067   181  AGAACACACTGTATCTGCAAATGAACACCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAACCGGGTCCTTATAGTGGGAGCC  270
V  92.7% (230/248)  IGHV3-23*01  227  .......G...................G........................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD1-26*01  3    -----------------------------------------------------------------------------............-  14

                                      T------------------>                                  
                                      P  Q  G  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1067   271  CGCAAGGGTACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.8% (45/46)    IGHJ4*02     3    --------..........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_28083

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGCGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGCGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQRVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1068   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1068   91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.0% (230/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_1068   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTACTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGC  270
V  92.0% (230/250)  IGHV3-21*01  227  ....C.............................................G.G..T..C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      R  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1068   271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_141991

Length=413
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           431     4e-123
IGHD2-2*02                                                                                            16.1    2.7   
IGHJ3*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-2*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAAGGAGT	TTGTAGTGATATGAGTTGCTATA	TTTGGGA	TGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAAGGAGTTTGTAGTGATATGAGTTGCTATATTTGGGATGACGCCTTTGATATT	ARDKGVCSDMSCYIWDDAFDI	292	354	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	111	3	0	97.4
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	286	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S 
                    Query_1069   4    CAGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTAGC  93
V  96.6% (286/296)  IGHV1-18*04  1    .....T........G.........................................................................C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       I  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y 
                    Query_1069   94   ATCTACGGTATCTCCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAACTAT  183
V  96.6% (286/296)  IGHV1-18*04  91   .G..........AG.....................................................C......................  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_1069   184  GCACAGAACCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGAC  273
V  96.6% (286/296)  IGHV1-18*04  181  ........G.........................................................C.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><--------------------------CDR3-IMGT-------------------------->         
                                       T  A  V  Y  Y  C  A  R  D  K  G  V  C  S  D  M  S  C  Y  I  W  D  D  A  F  D  I  W  G  Q 
                    Query_1069   274  ACGGCCGTGTACTACTGTGCGAGAGATAAAGGAGTTTGTAGTGATATGAGTTGCTATATTTGGGATGACGCCTTTGATATTTGGGGCCAA  363
V  96.6% (286/296)  IGHV1-18*04  271  ...........T..............----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  78.3% (18/23)    IGHD2-2*02   7    -----------------------------------.......AG..CC..C.......--------------------------------  29
J  94.0% (47/50)    IGHJ3*02     1    -----------------------------------------------------------------...T..T........C.........  25

                                                               
                                       G  T  M  V  T  V  S  S  
                    Query_1069   364  GGGACAATGGTCACCGTCTCTTCAG  388
J  94.0% (47/50)    IGHJ3*02     26   .........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40498920


Query= Query_141990

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_1070   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_1070   91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_1070   181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_1070   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_170478

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           266     2e-73
IGHD6-19*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGGGA	AGGCTCTTGCCGGCTC	TGGCTGGTAC	AAGGAGGGCAT	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAGGCTCTTGCCGGCTCTGGCTGGTACAAGGAGGGCATTTACTACTCCTACTACGGTATCGACGTC	GKALAGSGWYKEGIYYSYYGIDV	240	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	10	1	0	90.9
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	125	24	15	9	0	62.5
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	243	4	3	1	0	75
Total	N/A	N/A	228	199	29	0	87.3


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  S  T  Y  A  L  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  V  
                    Query_1071   16   GTGCAGTCTCTGGATTCACCTTCAGCACCTATGCCCTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCACTTGTTT  105
V  87.3% (199/228)  IGHV3-30*04  65   ......C..................T.G......TA...............................................G..A.A.  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  F  N  G  N  G  Q  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  D  S  K  T  T  I  Y  L  
                    Query_1071   106  CGTTTAATGGAAATGGTCAATACTACGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACGATTCCAAGACCACAATTTATCTGG  195
V  87.3% (199/228)  IGHV3-30*04  155  .A.A.G......G.AA.A...................................A...........A.........A...GC.G......C  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------------------CDR3-IMGT-------
                                      E  M  N  D  L  R  D  N  D  T  A  V  Y  F  C  G  K  A  L  A  G  S  G  W  Y  K  E  G  I  Y  
                    Query_1071   196  AAATGAACGACCTGAGAGATAACGACACGGCTGTGTATTTCTGTGGGAAGGCTCTTGCCGGCTCTGGCTGGTACAAGGAGGGCATTTACT  285
V  87.3% (199/228)  IGHV3-30*04  245  ........AG........C.G.G................A.....C..------------------------------------------  292
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (10/10)   IGHD6-19*01  12   ----------------------------------------------------------------..........----------------  21
J  96.7% (59/61)    IGHJ6*02     2    -------------------------------------------------------------------------------------.....  6

                                      ---------------------->                                 
                                      Y  S  Y  Y  G  I  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1071   286  ACTCCTACTACGGTATCGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
J  96.7% (59/61)    IGHJ6*02     7    ...A............G.......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_208992

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           434     4e-124
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	292	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	71	0	0	100
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	112	2	0	98.2
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	290	284	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  
                    Query_1072   8    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACT  97
V  97.9% (284/290)  IGHV5-51*03  5    ...............................................................................C.......G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      F  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  
                    Query_1072   98   TCTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCC  187
V  97.9% (284/290)  IGHV5-51*03  95   A...................................................G............................G........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_1072   188  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCG  277
V  97.9% (284/290)  IGHV5-51*03  185  ..........................................T...............................................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-------------CDR3-IMGT------------>                                  
                                      A  M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1072   278  CCATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  361
V  97.9% (284/290)  IGHV5-51*03  275  ....................----------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    ---------------------......C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_170476

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           385     4e-109
IGHD1-26*01                                                                                           10.3    132   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TCAGGCACGAGAA	GGGAG	GCGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGGCACGAGAAGGGAGGCGGGGCGAACGACTAC	VRHEKGGGANDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	284	1	1	0	0	100
Total	N/A	N/A	284	265	19	0	93.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P  N  Y
                    Query_1073   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCCAATTA  90
V  93.3% (265/284)  IGHV5-51*03  6    .............................................................................GC...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  A  D  S  D  T  R  Y  S  L
                    Query_1073   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAACATCTATCCTGCAGACTCTGACACCAGATACAGTCT  180
V  93.3% (265/284)  IGHV5-51*03  96   .....................................................T...........GT........T...........C.C  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        T  F  E  G  Q  V  I  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  S  G
                    Query_1073   181  GACCTTCGAAGGCCAGGTCATCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACAGCGG  270
V  93.3% (265/284)  IGHV5-51*03  186  .T.....C............C................................................C................C..C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1073   271  CGTGTATTATTGTGTCAGGCACGAGAAGGGAGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  351
V  93.3% (265/284)  IGHV5-51*03  276  .A.......C....-------------------------------------------------------------------  289
                                        M  Y  Y  C                                                                     
D  100.0% (5/5)     IGHD1-26*01  9    ---------------------------.....-------------------------------------------------  13
J  97.4% (37/38)    IGHJ4*02     9    -------------------------------------------....................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_28084

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           363     1e-102
IGHD2-21*01                                                                                           10.3    123   
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGGGCTTCCTTCGGTCAG	TTGTG	AAGGGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGGGCTTCCTTCGGTCAGTTGTGAAGGGTTACTTTGACTAC	ARDPGFLRSVVKGYFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  N  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1074   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCAACTTCAGCAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-30*03  47   .....................C..............C......T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  H  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  S  D  N  S  
                    Query_1074   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTCATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGCGACAATTCCA  180
V  96.4% (241/250)  IGHV3-30*03  137  ................................A..............................................A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  M  Y  F  C  A  R  D  P  G  F  L  R  S  
                    Query_1074   181  AGAACACCCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTATGTATTTTTGTGCGAGAGATCCGGGCTTCCTTCGGTCAG  270
V  96.4% (241/250)  IGHV3-30*03  227  .......G..........................................G......AC...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      GT-------------------->                                  
                                      V  V  K  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1074   271  TTGTGAAGGGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (5/5)     IGHD2-21*01  7    .....----------------------------------------------------  11
J  100.0% (46/46)   IGHJ4*02     3    -----------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_170474

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           333     1e-93
IGHD3-10*01                                                                                           10.3    118  
IGHJ3*01                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGCGA	AAGATGG	GGTTC	AAGGACACTCGAGCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGGGTTCAAGGACACTCGAGCGTTTTTGATGTC	AKDGVQGHSSVFDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	227	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  N  S  W  C  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1075   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTAACTCTTGGTGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.2% (227/241)  IGHV4-59*08  49   ........................................G....T...AC...A...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_1075   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTATAATCCCTCCCTTAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  94.2% (227/241)  IGHV4-59*08  139  ......................................C..C........C.....................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  W  A  K  D  G  V  Q  G  H  S  S  V 
                    Query_1075   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCGGTGTATTATTGGGCGAAAGATGGGGTTCAAGGACACTCGAGCGTT  270
V  94.2% (227/241)  IGHV4-59*08  229  ....................C........C..............C........C..T....-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD3-10*01  11   --------------------------------------------------------------------.....-----------------  15
J  90.9% (40/44)    IGHJ3*01     7    -----------------------------------------------------------------------------------------.  7

                                      -------->                                  
                                       F  D  V  R  G  Q  G  T  T  I  I  V  S  S  
                    Query_1075   271  TTTGATGTCAGGGGCCAAGGGACAACGATCATCGTCTCTTCAG  313
J  90.9% (40/44)    IGHJ3*01     8    .........T...............T.G...C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_170475

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           386     1e-109
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCCGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCCGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTTC	AGRIAVANTGHYFDF	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	71	0	0	100
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	46	5	0	90.2
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	102	12	0	89.5
CDR3-IMGT (germline)	289	291	3	3	0	0	100
Total	N/A	N/A	287	267	20	0	93


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  
                    Query_1076   5    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCT  94
V  93.0% (267/287)  IGHV5-51*03  5    ..............................................................................G...........  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  V  W  V  R  Q  M  P  G  R  G  L  E  G  M  G  A  I  Y  P  G  G  S  N  T  R  Y  I  
                    Query_1076   95   ACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGGGGATGGGGGCCATCTATCCTGGTGGCTCTAATACCCGTTACATCC  184
V  93.0% (267/287)  IGHV5-51*03  95   .........G.......................A..........T........AT..............A....G.....A.A....G..  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  T  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  A  
                    Query_1076   185  CGTCCTTCCAAGGCCAGGTCACCACCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACGCCG  274
V  93.0% (267/287)  IGHV5-51*03  185  ........................T.....................C...........G...............A.....T.....A...  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------CDR3-IMGT----------------->                               
                                      A  G  Y  Y  C  A  G  R  I  A  V  A  N  T  G  H  Y  F  D  F  W  G  K  E  T  L  V  T  V  S  
                    Query_1076   275  CCGGCTATTACTGTGCGGGCCGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTTCTGGGGCAAGGAAACCCTGGTCACCGTCTCCT  364
V  93.0% (267/287)  IGHV5-51*03  275  ..ATG............-------------------------------------------------------------------------  291
                                      A  M  Y  Y  C  A                                                                          
D  100.0% (12/12)   IGHD6-19*01  5    -----------------------............-------------------------------------------------------  16
J  93.8% (45/48)    IGHJ4*02     1    ---------------------------------------------............A.......C...G....................  45

                                         
                                      S  
                    Query_1076   365  CAG  367
J  93.8% (45/48)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_170472

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           329     3e-92
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAAC	TATTACTATGGTTCGGGG	GCCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAACTATTACTATGGTTCGGGGGCCCACTTTGACTAC	ARGNYYYGSGAHFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	42	9	0	82.4
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  G  G  Y  Y  L  R  W  I  R  P  H  P  R  E  G 
                    Query_1077   1    ACCCTGTCCCTCACCTGCACTGTTTCTGGTGGCTCCATTAAGAGTGGCGGTTACTACTTGAGGTGGATCCGCCCCCACCCCCGGGAGGGG  90
V  92.0% (230/250)  IGHV4-31*01  49   .......................C..............C.GC.....T..........G...C..........AG.....AG..A....C  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  Y  S  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 
                    Query_1077   91   CTGGAGTGGATTGGGTTCATCTATTCCAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACCTCT  180
V  92.0% (230/250)  IGHV4-31*01  139  ................A........A............................................................G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  R  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  N  Y  Y  Y  G  S 
                    Query_1077   181  AAGAACCGGTTCTCCCTGAAGTTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGAACTATTACTATGGTTCG  270
V  92.0% (230/250)  IGHV4-31*01  229  .......A.............C...GC...........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (18/18)   IGHD3-10*01  2    ---------------------------------------------------------------------------...............  16

                                      ----------------->                                  
                                       G  A  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1077   271  GGGGCCCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (18/18)   IGHD3-10*01  17   ...-------------------------------------------------  19
J  100.0% (45/45)   IGHJ4*02     4    -------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_170473

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGTT	CGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTTCGGGACAC	ARDDDVWGSSGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1078   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1078   91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*01  139  ........GT........T.......G...............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  S  G 
                    Query_1078   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTTCGGGA  270
V  95.5% (234/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.0% (19/20)    IGHD3-16*01  7    -----------------------------------------------------------------....T...............-----  26

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1078   271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_170470

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ3*01                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATA	CTACAGGTCG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACAGGTCGTGATCCTTTTGATTTC	ARVSREYYDTTGRDPFDF	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1079   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1079   91   AGTGGGTGGCAGTTATTTGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  96.8% (241/249)  IGHV3-33*01  137  ................A.....................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_1079   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  96.8% (241/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  F  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_1079   271  CTACAGGTCGTGATCCTTTTGATTTCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
J  92.0% (46/50)    IGHJ3*01     1    ----------....G........G...................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_170471

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           424     8e-121
IGHD3-3*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCAACCTGACTC	TTTTGGAGTGGTTAT	CTC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGGCAACCTGACTCTTTTGGAGTGGTTATCTCCTTTGACAAC	TRGQPDSFGVVISFDN	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	74	1	0	98.7
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	112	2	0	98.2
CDR3-IMGT (germline)	291	297	7	6	1	0	85.7
Total	N/A	N/A	295	283	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  N  F  S 
                    Query_1080   3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAACTTTAGC  92
V  95.9% (283/295)  IGHV1-18*01  1    .....T............................................................................C.....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       G  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  T  G  Y  N  G  K  R  N  Y 
                    Query_1080   93   GGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCACCGGTTACAATGGTAAAAGAAACTAT  182
V  95.9% (283/295)  IGHV1-18*01  91   A.......................................................A.......G..C............C.C.......  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  L  Q  D  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_1080   183  GCACAGAATCTCCAGGACAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  272
V  95.9% (283/295)  IGHV1-18*01  181  ........G.......G.........................................................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  T  R  G  Q  P  D  S  F  G  V  V  I  S  F  D  N  W  G  Q  G  T  L  V  T 
                    Query_1080   273  ACGGCCGTGTATTACTGTACGAGAGGGCAACCTGACTCTTTTGGAGTGGTTATCTCCTTTGACAACTGGGGCCAGGGAACCCTGGTCACC  362
V  95.9% (283/295)  IGHV1-18*01  271  ..................G......-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (15/15)   IGHD3-3*01   11   --------------------------------------...............-------------------------------------  25
J  97.7% (43/44)    IGHJ4*02     5    --------------------------------------------------------.......T..........................  38

                                                
                                       V  S  S  
                    Query_1080   363  GTCTCCTCAG  372
J  97.7% (43/44)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_101304

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           366     2e-103
IGHD3-22*01                                                                                           39.1    3e-07 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGAATAATCG	ATTACTATGATAGTAGTGGT	CTAGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGACATGGAATAATCGATTACTATGATAGTAGTGGTCTAGCCTACTTTGACCAG	ARHGIIDYYDSSGLAYFDQ	249	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	245	11	0	95.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  G  S  T  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_1081   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCAGCTTCAGTGGCTCTACTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  95.7% (245/256)  IGHV3-73*01  47   .........A..........................C.............G.......................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  T  K  A  N  S  Y  A  T  V  Y  A  V  S  V  K  G  R  F  T  I  S  R  D  
                    Query_1081   91   AGTGGGTTGGCCGTATTAGAACCAAAGCCAACAGTTACGCGACAGTATATGCTGTGTCGGTGAAAGGCAGGTTCACCATTTCCAGAGATG  180
V  95.7% (245/256)  IGHV3-73*01  137  .....................G......T................C........C........................C..........  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  H  G  I  I  D  
                    Query_1081   181  ATTCAAAGAACACGGCGTATCTGCAAATGAACAGTCTGAAAACCGAGGACACGGCCGTGTATTATTGTGCTAGACATGGAATAATCGATT  270
V  95.7% (245/256)  IGHV3-73*01  227  ..................................C.............................C...A.......--------------  302
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (20/20)   IGHD3-22*01  3    ---------------------------------------------------------------------------------------...  5

                                      --CDR3-IMGT----------------------->                                  
                                      Y  Y  D  S  S  G  L  A  Y  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1081   271  ACTATGATAGTAGTGGTCTAGCCTACTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  100.0% (20/20)   IGHD3-22*01  6    .................----------------------------------------------------  22
J  95.7% (45/47)    IGHJ4*02     2    ----------------------..........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_247217

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           352     3e-99
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATC	TGTAGTAGTACCA	ACTTA	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATCTGTAGTAGTACCAACTTATATGGACGTC	ARESVVVPTYMDV	239	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	24	0	0	100
FR3-IMGT	125	238	114	111	3	0	97.4
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	233	229	4	0	98.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 
                    Query_1082   14   TGTGCAGCGTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATA  103
V  98.3% (229/233)  IGHV3-33*01  64   ............................G.............................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  M 
                    Query_1082   104  TGGTATGATGGAAGTAATAAATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATATG  193
V  98.3% (229/233)  IGHV3-33*01  154  ...................................C...................................................C..  243
                                       W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------CDR3-IMGT-------------->      
                                       Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  E  S  V  V  V  P  T  Y  M  D  V  W  G 
                    Query_1082   194  CAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGAGAATCTGTAGTAGTACCAACTTATATGGACGTCTGGGGC  283
V  98.3% (229/233)  IGHV3-33*01  244  ...................C.................................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (13/13)   IGHD2-2*01   8    --------------------------------------------------------.............---------------------  20
J  100.0% (43/43)   IGHJ6*02     20   --------------------------------------------------------------------------................  35

                                                                 
                                       Q  G  T  T  V  T  V  S  S 
                    Query_1082   284  CAAGGGACCACGGTCACCGTCTCCTCA  310
J  100.0% (43/43)   IGHJ6*02     36   ...........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_301318

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           343     2e-96
IGHD3-9*01                                                                                            23.8    0.010
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCGG	TTACGATTTTTTGTCTGG	G	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGCGGTTACGATTTTTTGTCTGGG	ARDRGYDFLSG	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  F  R  D  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_1083   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATATTCAGAGATGGTTACTACTGGAGCTGGATCCGCCAACACCCAGGGAAGGGC  90
V  93.6% (235/251)  IGHV4-31*03  49   ......................................CAG...T.G...........................G...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_1083   91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGAGAACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATTTCAATTGACACCTCT  180
V  93.6% (235/251)  IGHV4-31*03  139  ................A..................C......................................A...G.A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  D  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  G  Y  D  F  L 
                    Query_1083   181  AAGGACCAGTTCTCCCTGAACCTGAGCTCTGTGACTGCCGCGGACACGGCCGTTTATTACTGCGCGAGAGATCGCGGTTACGATTTTTTG  270
V  93.6% (235/251)  IGHV4-31*03  229  ...A................G................................G........T........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (16/18)    IGHD3-9*01   4    -----------------------------------------------------------------------------.......A.....  16

                                      ----->                                  
                                       S  G  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1083   271  TCTGGGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
D  88.9% (16/18)    IGHD3-9*01   17   A....-----------------------------------  21
J  100.0% (34/34)   IGHJ4*02     15   ------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_247216

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_1084   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.8% (277/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_1084   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_1084   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1084   271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.8% (277/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_1084   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_75708

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           383     1e-108
IGHD3-10*01                                                                                           23.8    0.011 
IGHJ1*01                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TAACGGCG	GGTTCGGGGAGT	N/A	CTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAACGGCGGGTTCGGGGAGTCTGAATACTTCCAGCAC	ARHNGGFGESEYFQH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	248	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_1085   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  98.8% (248/251)  IGHV4-39*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  C  P  S  L  K  S  R  V  P  I  S  V  D  T  S 
                    Query_1085   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACTGCCCGTCCCTCAAGAGTCGAGTCCCCATATCCGTAGACACGTCC  180
V  98.8% (248/251)  IGHV4-39*01  139  .............................................AA......................A....................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  N  G  G  F  G  E 
                    Query_1085   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATAACGGCGGGTTCGGGGAG  270
V  98.8% (248/251)  IGHV4-39*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD3-10*01  11   -------------------------------------------------------------------------------...........  21

                                      ----------------->                                  
                                       S  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1085   271  TCTGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (12/12)   IGHD3-10*01  22   .---------------------------------------------------  22
J  100.0% (51/51)   IGHJ1*01     2    -...................................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_341458

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCGACC	GGGTACATCAGTGGC	GGCA	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCGACCGGGTACATCAGTGGCGGCATCGACCTC	AKATGYISGGIDL	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	24	16	5	3	66.7
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	247	222	22	3	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  D  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1086   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCAGTTTTGACACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  89.9% (222/247)  IGHV3-23*01  47   .....................C..............CC...AG..G.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  S  S  G     G  D  N  T  Y  Y  A  D  S  V  K  G  R  F  A  L  S  R  D  N  S  
                    Query_1086   91   AATGGGTCTCAGGTTCTAGTGGT---GGTGATAATACATACTACGCAGACTCCGTGAAGGGCCGGTTCGCCCTCTCCAGAGACAATTCCA  177
V  89.9% (222/247)  IGHV3-23*01  137  .G..........C.AT.......AGT....G..GC.................................A..A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  S  T  L  Y  L  H  M  N  G  L  R  V  E  D  T  A  I  Y  Y  C  A  K  A  T  G  Y  I  S  G  
                    Query_1086   178  AGAGCACACTGTATCTGCACATGAACGGCCTGAGAGTCGAGGACACGGCCATATATTACTGTGCGAAGGCGACCGGGTACATCAGTGGCG  267
V  89.9% (222/247)  IGHV3-23*01  227  ...A...G...........A......A.........C.............G................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  86.7% (13/15)    IGHD6-19*01  1    --------------------------------------------------------------------------.....T.G.......-  15

                                      ---------->                                  
                                      G  I  D  L  W  G  Q  G  T  L  V  T  V  F  S  
                    Query_1086   268  GCATCGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTTCTCAG  312
J  95.2% (40/42)    IGHJ5*02     10   ---......C.............................C.....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_341459

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            329     3e-92
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCTA	TATTACTATGAAAGTAGTGGTT	CAT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCTATATTACTATGAAAGTAGTGGTTCATACTTCTTTGACTAC	ARSLYYYESSGSYFFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	228	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  D  S  I  S  N  S  R  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_1087   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCATCAGTAATTCTAGGTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  92.7% (228/246)  IGHV4-4*02   49   ...............................G.........C.G.AG..AC...................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  H  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  K  S  K 
                    Query_1087   91   GAGTGGATTGGAGACATCCATCATAGTGGGACCACCAACTACAATCCGTCCCTCAAGAGTCGAGTCACCCTCTCAGTAGACAAGTCCAAG  180
V  92.7% (228/246)  IGHV4-4*02   139  ...........G..A...T............G............C........................A.A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       K  R  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  Y  E  S  S 
                    Query_1087   181  AAGCGGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAAGCCTATATTACTATGAAAGTAGT  270
V  92.7% (228/246)  IGHV4-4*02   229  ..C.A.................G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  95.5% (21/22)    IGHD3-22*01  2    ------------------------------------------------------------------------...........T......  19

                                      -------------------->                                  
                                       G  S  Y  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1087   271  GGTTCATACTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  95.5% (21/22)    IGHD3-22*01  20   ....---------------------------------------------------  23
J  97.9% (47/48)    IGHJ4*02     1    -------...A............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_75701

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            321     7e-90
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTTTG	ACTATGATAGTCGTGGCTTTTAC	AGACGTTCTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTTTGACTATGATAGTCGTGGCTTTTACAGACGTTCTAACTACTTTGACTTC	ARGFDYDSRGFYRRSNYFDF	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	51	0	0	100
CDR2-IMGT	108	128	21	21	0	0	100
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  T  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_1088   1    GGTCCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCACTACTAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  91.5% (226/247)  IGHV4-4*01   47   ..A.....TCC...A....CG.....................GC.G......C.....................................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  Q  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  
                    Query_1088   91   TGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCCAGTACAACCCGTCACTCAAGAGTCGAGTCACGATATCAGTAGACAAGTCCA  180
V  91.5% (226/247)  IGHV4-4*01   137  ......................................A.C...........C.................C...................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  I  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  F  D  Y  D  S  R  
                    Query_1088   181  AGAACCAGATCTCCCTGAGGTTGAGTTCCGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGGCTTTGACTATGATAGTCGTG  270
V  91.5% (226/247)  IGHV4-4*01   227  ........T.........A.C....C..T............................G.........-----------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                          
D  87.0% (20/23)    IGHD3-22*01  6    ---------------------------------------------------------------------------...........A...  20

                                      R3-IMGT------------------------>                                  
                                      G  F  Y  R  R  S  N  Y  F  D  F  W  G  R  G  T  L  V  A  V  S  S  
                    Query_1088   271  GCTTTTACAGACGTTCTAACTACTTTGACTTCTGGGGCCGGGGAACCCTGGTCGCTGTCTCCTCAG  336
D  87.0% (20/23)    IGHD3-22*01  21   .T.A....----------------------------------------------------------  28
J  91.7% (44/48)    IGHJ4*02     1    ------------------............A........A.............A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_75700

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70D*04                                                                                          392     2e-111
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ3*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70D*04	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGGA	ACGGG	TACTATGATAGTGGTGGTTAT	CCGATTCA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGAACGGGTACTATGATAGTGGTGGTTATCCGATTCATGATGCTTTTGATATC	ARNGYYDSGGYPIHDAFDI	263	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	49	2	0	96.1
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	109	5	0	95.6
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	269	260	9	0	96.7


Alignments

                                       <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                         L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  R  T  T  G  M  R  V  S  W  I  R
                    Query_1089    1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCAGAACTACTGGAATGCGTGTGAGTTGGATCCG  90
V  96.7% (260/269)  IGHV2-70D*04  30   ............................................................C....G...............C........  119
                                         L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  R  V  S  W  I  R

                                       -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                         Q  P  P  G  K  A  L  E  W  L  A  R  I  D  W  D  D  D  K  F  Y  N  P  S  L  M  T  R  L  T
                    Query_1089    91   TCAGCCCCCGGGGAAGGCCCTGGAGTGGCTTGCACGCATTGATTGGGATGATGATAAATTCTACAACCCATCTCTGATGACCAGGCTCAC  180
V  96.7% (260/269)  IGHV2-70D*04  120  .........A.......................................................G.A.........A............  209
                                         Q  P  P  G  K  A  L  E  W  L  A  R  I  D  W  D  D  D  K  F  Y  S  T  S  L  K  T  R  L  T

                                       ---------------------FR3-IMGT----------------------------------------------------><-------
                                         I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  I  D  P  V  D  T  A  T  Y  Y  C  A  R  N
                    Query_1089    181  CATCTCCAAGGACACCTCCAAAAACCAGGTGGTCCTGACAATGACCAACATCGACCCTGTGGACACAGCCACGTATTACTGTGCACGGAA  270
V  96.7% (260/269)  IGHV2-70D*04  210  ....................................T..............G.....................................-  298
                                         I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                       ----------------CDR3-IMGT----------------------->                                  
                                         G  Y  Y  D  S  G  G  Y  P  I  H  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1089    271  CGGGTACTATGATAGTGGTGGTTATCCGATTCATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  353
D  95.2% (20/21)    IGHD3-22*01   5    ----............A........----------------------------------------------------------  25
J  100.0% (50/50)   IGHJ3*02      1    ---------------------------------..................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_75703

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            304     9e-85
IGHD3-16*01                                                                                           12.2    30   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCACGG	TGGGGG	CAGTGCA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCACGGTGGGGGCAGTGCATGACTAC	ATTVGAVHDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	22	5	0	81.5
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	18	3	0	85.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	220	26	0	89.4


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  D  S  I  T  N  T  N  W  W  S  W  V  R  Q  P  P  E  K  G  
                    Query_1090   1    GGTCCCTGAGACTCTCCTGTGCTGTCTCTGGCGACTCCATCACCAATACTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGAGAAGGGTC  90
V  89.4% (220/246)  IGHV4-4*02   47   ..A.....TCC...A....C...........T.G........G..G..G................................G......G.  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  F  H  T  G  T  T  N  Y  H  P  S  L  K  S  R  A  T  I  S  V  D  K  S  
                    Query_1090   91   TGGAGTGGATTGGGGAAATCTTTCATACTGGGACCACCAACTACCACCCGTCCCTCAAGAGTCGAGCCACCATATCCGTAGACAAGTCCA  180
V  89.4% (220/246)  IGHV4-4*02   137  .....................A.....G.....G..........A.....................T.........A.............  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      N  N  Q  F  S  L  N  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  T  V  G  A  V  H  D  
                    Query_1090   181  ACAATCAGTTTTCCCTGAACTTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGCGACCACGGTGGGGGCAGTGCATGACT  270
V  89.4% (220/246)  IGHV4-4*02   227  .G..C.....C........GC...G.................................C.......------------------------  292
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-16*01  17   ------------------------------------------------------------------------......------------  22
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_1090   271  ACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   .........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_75702

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         338     5e-95
IGHD3-10*01                                                                                           37.2    9e-07
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAA	GTATTACTATGGTTCGGGG	CCCCCGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAGTATTACTATGGTTCGGGGCCCCCGATTGACTCC	ARDKYYYGSGPPIDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1091     1    GGTCCCTGAGACTCTCCTGTGCCGCCTCTGGATTCACCTTCAGTGACTATTCTATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-30-3*01  47   ......................A.....................AG....G....G..................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  E  D  G  N  K  K  Y  Y  A  G  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1091     91   AATGGGTGGCTGTTATATCAGAGGATGGAAACAAAAAATACTACGCAGGCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.2% (233/250)  IGHV3-30-3*01  137  .G........A.........T.T.......G...T.............A.........................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  K  Y  Y  Y  G  S  
                    Query_1091     181  AGAACACCCTGTTTCTCCAAATGAACAGCCTGAGAGCTGAGGACACGGCTATTTATTACTGTGCGAGAGATAAGTATTACTATGGTTCGG  270
V  93.2% (233/250)  IGHV3-30-3*01  227  .......G....A...G.................................G.G.................--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (19/19)   IGHD3-10*01    1    -------------------------------------------------------------------------.................  17

                                        ---------------->                                  
                                        G  P  P  I  D  S  W  G  R  G  T  L  V  I  V  S  S  
                    Query_1091     271  GGCCCCCGATTGACTCCTGGGGCCGGGGAACGCTGGTCATCGTCTCCTCAG  321
D  100.0% (19/19)   IGHD3-10*01    18   ..-------------------------------------------------  19
J  90.5% (38/42)    IGHJ4*02       7    ---------......A........A......C.......C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_75705

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           325     3e-91
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGGG	AGCAATGGCTGG	GGAAGGTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTATGGACGCC	ARGHRGSNGWGRYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	22	2	6	73.3
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	16	5	0	76.2
FR3-IMGT	153	266	114	107	7	0	93.9
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	243	25	6	88.7


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  P  F  S  D  S  G  Y  Y  W  N  W  
                    Query_1092   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGCCCTTCAGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.7% (243/274)  IGHV4-34*01  26   ........T.......T............T................C..T......T.........------....C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  
                    Query_1092   91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAATCCGTCCCTCCAGAGTCGAG  180
V  88.7% (243/274)  IGHV4-34*01  110  T.........C...........G.....G.............T..A....AG.....G............C.........A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  L  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_1092   181  TCACCATATCACTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.7% (243/274)  IGHV4-34*01  200  ...........G...............................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  G  S  N  G  W  G  R  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  I  S  S 
                    Query_1092   271  GAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCATCTCCTCA  359
V  88.7% (243/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.............T................A.....A..G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_75704

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           311     5e-87
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	263	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	39	6	0	86.7
CDR1-IMGT	47	76	30	23	1	6	76.7
FR2-IMGT	77	127	51	45	6	0	88.2
CDR2-IMGT	128	148	21	15	6	0	71.4
FR3-IMGT	149	262	114	106	8	0	93
CDR3-IMGT (germline)	263	270	8	8	0	0	100
Total	N/A	N/A	269	236	27	6	87.7


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R 
                    Query_1093   2    CTGGTGAAACCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGC  91
V  87.7% (236/269)  IGHV4-34*01  31   ...T....G..T............T................C..T............------........C.......G....AT....  114
                                       L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R 

                                      ------FR2-IMGT---------------------><-----CDR2-IMGT-----><--------------------------------
                                       Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T 
                    Query_1093   92   CAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACC  181
V  87.7% (236/269)  IGHV4-34*01  115  .....C...........G.....G................A..A.AG.....G..C.........C.C.......A..............  204
                                       Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T 

                                      --------------------FR3-IMGT----------------------------------------------------><--------
                                       I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G 
                    Query_1093   182  ATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGC  271
V  87.7% (236/269)  IGHV4-34*01  205  ..A...................................GC............C........................C...........-  293
                                       I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G 

                                      -----------------CDR3-IMGT------------------------>                                 
                                       H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_1093   272  CACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  355
D  91.7% (11/12)    IGHD6-19*01  7    ---------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_75707

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           391     6e-111
IGHD2-8*01                                                                                            19.9    0.18  
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGGTAGG	ATGGTGTATG	ATTCAAGGGG	CTGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGGTAGGATGGTGTATGATTCAAGGGGCTGCTTCGACCCC	ARLGRMVYDSRGCFDP	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	69	2	0	97.2
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	104	10	0	91.2
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  N  
                    Query_1094   7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCCGGATACACTTTTAGCAACT  96
V  93.1% (270/290)  IGHV5-51*03  5    ...............................A......................................T.......GC....C..G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  S  I  Y  P  G  D  S  D  T  R  Y  N  
                    Query_1094   97   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGCTGGGGAGTATCTATCCCGGTGACTCTGATACCAGATACAACC  186
V  93.1% (270/290)  IGHV5-51*03  95   ...............................................A......TC........T......................G..  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  T  F  Q  G  R  V  T  M  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  K  L  E  A  S  D  T  
                    Query_1094   187  CGACCTTCCAAGGCCGGGTCACCATGTCAGCCGACAAGTCCATCAACACCGCCTACCTCCAGTGGAGCAAGCTGGAGGCCTCGGACACCG  276
V  93.1% (270/290)  IGHV5-51*03  185  ..T............A.........C...................G............G..........GC...A...............  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-------------------CDR3-IMGT------------------>                            
                                      A  I  Y  Y  C  A  R  L  G  R  M  V  Y  D  S  R  G  C  F  D  P  W  G  Q  G  T  L  V  T  V  
                    Query_1094   277  CCATCTATTACTGTGCGAGACTGGGTAGGATGGTGTATGATTCAAGGGGCTGCTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCT  366
V  93.1% (270/290)  IGHV5-51*03  275  ....G...............----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (10/10)   IGHD2-8*01   15   -----------------------------..........---------------------------------------------------  24
J  97.9% (46/47)    IGHJ5*02     5    -------------------------------------------------...G.....................................  45

                                            
                                      S  S  
                    Query_1094   367  CCTCAG  372
J  97.9% (46/47)    IGHJ5*02     46   ......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_75706

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           37.2    9e-07 
IGHJ3*02                                                                                              62.2    6e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCATCG	CTATGGTTCGGGGAGTTAT	GC	TGATA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCATCGCTATGGTTCGGGGAGTTATGCTGATATG	ARGHRYGSGSYADM	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  I  V  S  G  V  S  I  S  S  G  G  Y  Y  W  C  W  I  R  Q  H  P  G  K  G 
                    Query_1095   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGTGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ...................C...........G............................A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_1095   91   CTGGAGTGGATTGGGTACATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTTCCATATCTGTAGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..........................C..........................................A.......A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  A  Y  F  C  A  R  G  H  R  Y  G  S  G 
                    Query_1095   181  AAGAATCAGTTCTCCCTGAAGCTGAGTTCTGTGACTGCCGCGGACACGGCCGCGTATTTCTGTGCGAGAGGCCATCGCTATGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .....C....................C.........................T.....A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (19/19)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      -------------->                                  
                                       S  Y  A  D  M  W  G  R  G  T  M  V  T  V  S  S  
                    Query_1095   271  AGTTATGCTGATATGTGGGGCCGCGGGACAATGGTCACCGTCTCTTCAG  319
D  100.0% (19/19)   IGHD3-10*01  20   ......-------------------------------------------  25
J  92.7% (38/41)    IGHJ3*02     10   --------......C.......AA.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_349669

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           271     7e-75
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TGGGCGCAAAACTCGGTCA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATGGGCGCAAAACTCGGTCAGATGCTTTTGATATC	VRDGRKTRSDAFDI	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	19	7	0	73.1
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	126	24	21	3	0	87.5
FR3-IMGT	127	240	114	97	17	0	85.1
CDR3-IMGT (germline)	241	248	8	6	2	0	75
Total	N/A	N/A	247	210	37	0	85


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  T  A  S  G  F  V  F  S  S  S  W  M  H  W  V  R  Q  T  P  E  K  G  L  V  
                    Query_1096   2    CCCTGTCCCTCACCTGTACAGCGTCCGGATTCGTCTTCAGTAGTTCCTGGATGCACTGGGTCCGCCAAACTCCAGAAAAGGGGCTGGTTT  91
V  85.0% (210/247)  IGHV3-74*01  50   .....AGA...T.....G....C..T......AC.........C.A......................G......GG...........G.  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  R  I  N  G  D  G  S  A  T  S  Y  A  E  F  V  K  G  R  F  A  I  S  R  D  N  A  K  
                    Query_1096   92   GGGTCTCACGTATTAATGGTGATGGGAGTGCCACATCCTACGCGGAGTTCGTGAAGGGCCGATTCGCCATCTCCAGAGACAACGCCAAGA  181
V  85.0% (210/247)  IGHV3-74*01  140  .................A...........AG....AG.........C.C................A........................  229
                                      W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  Q  F  L  Q  T  N  S  L  R  V  E  D  S  G  I  Y  Y  C  V  R  D  G  R  K  T  R  S  D  
                    Query_1096   182  ACACTCAGTTTTTGCAAACGAACAGTCTCAGAGTCGAGGACAGTGGTATTTATTACTGTGTGAGAGATGGGCGCAAAACTCGGTCAGATG  271
V  85.0% (210/247)  IGHV3-74*01  230  ....G.T..A.C......T.........G....C........CG.C.G.G..........CA.....-----------------------  296
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
J  98.0% (48/49)    IGHJ3*02     2    --------------------------------------------------------------------------------------....  5

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  K  V  T  V  S  S  
                    Query_1096   272  CTTTTGATATCTGGGGCCAAGGGACAAAGGTCACCGTCTCTTCAG  316
J  98.0% (48/49)    IGHJ3*02     6    ...........................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_349668

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           308     4e-86
IGHD3-22*01                                                                                           23.8    0.011
IGHJ2*01                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAT	TATTTCCATGATAGTCGTGGT	G	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCATTATTTCCATGATAGTCGTGGTGACTGGTACTTCGATCTC	ARDHYFHDSRGDWYFDL	236	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	10	1	0	90.9
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	121	21	15	6	0	71.4
FR3-IMGT	122	235	114	108	6	0	94.7
CDR3-IMGT (germline)	236	243	8	8	0	0	100
Total	N/A	N/A	229	213	16	0	93


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  V  S  H  D  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  
                    Query_1097   15   GTACAGCCTCTGGGTTCACCGTCAGTCACGACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTC  104
V  93.0% (213/229)  IGHV3-53*01  65   ..G.......................AG.A...........................................................T  154
                                         A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  

                                      --CDR2-IMGT-----><----------------------------------------------------FR3-IMGT------------
                                      H  R  D  G  K  T  D  Y  A  V  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  V  Y  L  Q  
                    Query_1097   105  ATAGGGATGGAAAAACAGACTATGCAGTCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACTGTGTATCTTCAAA  194
V  93.0% (213/229)  IGHV3-53*01  155  ....C.G...T.GC...T....C....A................................................GC............  244
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  

                                      ----------------------------------------><--------------------CDR3-IMGT-------------------
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  H  Y  F  H  D  S  R  G  D  W  Y  F  D  
                    Query_1097   195  TGAACAGCCTGCGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGACCATTATTTCCATGATAGTCGTGGTGACTGGTACTTCGATC  284
V  93.0% (213/229)  IGHV3-53*01  245  ...........A.....................................-----------------------------------------  293
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                            
D  85.7% (18/21)    IGHD3-22*01  2    -----------------------------------------------------....A.T........A.....----------------  22
J  100.0% (51/51)   IGHJ2*01     3    ---------------------------------------------------------------------------...............  17

                                      ->                                  
                                      L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_1097   285  TCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  320
J  100.0% (51/51)   IGHJ2*01     18   ....................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_263930

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD2-2*01                                                                                            14.1    9.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTCAATTTGGTTCCGCAAATGG	GTACCAG	N/A	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTCAATTTGGTTCCGCAAATGGGTACCAGTACGGCATGGACGTC	ARFQFGSANGYQYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_1098   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  98.3% (284/289)  IGHV5-51*03  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_1098   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATTGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ................................................G.........................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  H  L  Q  W  S  S  L  R  A  S  D  S  A
                    Query_1098   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCCACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACAGCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ............................................G.......T.....................A...........C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  F  Q  F  G  S  A  N  G  Y  Q  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_1098   271  CATGTATTACTGTGCGAGATTTCAATTTGGTTCCGCAAATGGGTACCAGTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  98.3% (284/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-2*01   15   ------------------------------------------.......-----------------------------------------  21
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------------.....T...................................  55

                                             
                                        S  S 
                    Query_1098   361  CTCCTCA  367
J  97.9% (47/48)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_263931

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TG	ACGATTTTTGGAGTGG	CCCCGTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACGATTTTTGGAGTGGCCCCGTCCTACTCTGACTCC	ARVTIFGVAPSYSDS	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	233	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  H  T  R  Y  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_1099   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCACACTCGTTACTACTGGAACTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  95.5% (233/244)  IGHV4-59*01  49   ....................................AT..G.A............G.............C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1099   91   TGGATTGGGTATATCCATTACAGTGGGAGCACCAATTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAT  180
V  95.5% (233/244)  IGHV4-59*01  139  ...............T...................C.....C...............................................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  T  I  F  G  V  A  P  S 
                    Query_1099   181  CAGTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTGACGATTTTTGGAGTGGCCCCGTCC  270
V  95.5% (233/244)  IGHV4-59*01  229  ...............C................................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (16/16)   IGHD3-3*01   6    ------------------------------------------------------------------................--------  21
J  93.6% (44/47)    IGHJ4*02     2    -----------------------------------------------------------------------------------------.  2

                                      ----------->                                  
                                       Y  S  D  S  W  V  Q  G  T  L  V  T  V  S  S  
                    Query_1099   271  TACTCTGACTCCTGGGTCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  93.6% (44/47)    IGHJ4*02     3    ....T.....A.....G.............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_263936

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           325     3e-91
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGACC	TACGATTTTTGGAG	GGACC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGACCTACGATTTTTGGAGGGACCACTACTACGCTATGGACGTC	ARVTYDFWRDHYYAMDV	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  I  T  C  T  V  S  G  A  S  I  T  T  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  R  G 
                    Query_1100   1    ACCCTGTCCATCACCTGCACTGTCTCTGGTGCCTCCATCACCACTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAGGGGG  90
V  91.9% (228/248)  IGHV4-39*01  49   .........C.....................G........G..G.........................................A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  V  Y  Y  I  G  S  T  Y  Y  N  P  S  L  R  S  R  I  P  I  S  V  D  T  S 
                    Query_1100   91   CTGGAATGGATTGGGACTGTCTATTATATTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGGATCCCCATATCCGTGGACACGTCC  180
V  91.9% (228/248)  IGHV4-39*01  139  .....G..........G.A.........G.............................A......AG..A..........A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       E  N  Q  F  S  L  R  L  G  S  L  T  A  A  D  T  A  V  Y  H  C  A  R  V  T  Y  D  F  W  R 
                    Query_1100   181  GAGAACCAGTTCTCCCTGAGGCTGGGCTCTTTGACCGCCGCAGACACGGCTGTCTATCACTGTGCGAGGGTGACCTACGATTTTTGGAGG  270
V  91.9% (228/248)  IGHV4-39*01  229  A..................A....A.....G......................G...T..........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (14/14)   IGHD3-3*01   5    ---------------------------------------------------------------------------..............-  18

                                      MGT-------------------->                                 
                                       D  H  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_1100   271  GACCACTACTACGCTATGGACGTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  327
J  94.3% (50/53)    IGHJ6*02     10   ----.........G..................A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_263937

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           305     3e-85
IGHD3-10*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCCCAAGG	GGTTCGGGG	TCTTTCTGCGGCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCCCAAGGGGTTCGGGGTCTTTCTGCGGCCCTTTGACCAC	ARPKGFGVFLRPFDH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	221	26	0	89.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  T  S  G  F  T  L  S  S  S  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1101   1    GGTCCCTGAGACTCTCCTGTGAAACCTCTGGATTCACCTTGAGTAGTTCCACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.5% (221/247)  IGHV3-21*01  47   .....................C.G................C.....C.AT.G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  T  S  G  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1101   91   AGTGGGTCGCATCTATTACTAGTGGAAGCACTTACATCTACTACGCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  89.5% (221/247)  IGHV3-21*01  137  ........T....C....G....A.T..T.G......A........................C......................CG...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  L  S  G  L  R  V  E  D  T  A  V  Y  S  C  A  R  P  K  G  F  G  V  F  
                    Query_1101   181  AGAACTCACTGTTTCTGCAACTGAGTGGCCTGAGAGTCGAGGACACGGCTGTCTATTCCTGTGCGAGGCCCAAGGGGTTCGGGGTCTTTC  270
V  89.5% (221/247)  IGHV3-21*01  227  ............A.......A...ACA.........C...............G....A.........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD3-10*01  11   ---------------------------------------------------------------------------.........------  19

                                      ---------------->                                  
                                      L  R  P  F  D  H  W  G  Q  G  P  L  V  T  L  S  S  
                    Query_1101   271  TGCGGCCCTTTGACCACTGGGGCCAGGGACCCCTGGTCACCCTCTCCTCAG  321
J  93.2% (41/44)    IGHJ4*02     5    -------.......T..............A...........G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_271724

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           382     4e-108
IGHD6-19*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTCTGTG	AGCAGTGCCTGGT	CGTTTGGTCCCCCCCCACGACTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCTGTGAGCAGTGCCTGGTCGTTTGGTCCCCCCCCACGACTCTACTACCTCGACTGC	ARHSVSSAWSFGPPPRLYYLDC	273	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	21	0	6	77.8
FR3-IMGT	159	272	114	108	6	0	94.7
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	280	264	10	6	94.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  H  W  G  W  
                    Query_1102   1    CAGGGCTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGCAGTTACCACTGGGGCTGGA  90
V  94.3% (264/280)  IGHV4-39*01  26   ....A...........T.....................................................T......T............  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  N  T  N  Y  N  P  S  L  K  
                    Query_1102   91   TCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCAACACCAACTACAACCCGTCCCTCAAGA  180
V  94.3% (264/280)  IGHV4-39*01  116  ..........................................................------....T.....................  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S        T  Y  Y  N  P  S  L  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  V  T  M  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  T  Y  Y  
                    Query_1102   181  GTCGAGTAACCATGTCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGAGCGCCGCAGACACGGCTACGTATTACT  270
V  94.3% (264/280)  IGHV4-39*01  200  .......C.....A.................................................C................GT........  289
                                      S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  

                                      -><----------------------------CDR3-IMGT--------------------------->                      
                                      C  A  R  H  S  V  S  S  A  W  S  F  G  P  P  P  R  L  Y  Y  L  D  C  W  G  Q  G  T  L  V  
                    Query_1102   271  GTGCGAGACATTCTGTGAGCAGTGCCTGGTCGTTTGGTCCCCCCCCACGACTCTACTACCTCGACTGCTGGGGCCAGGGAACCCTGGTCA  360
V  94.3% (264/280)  IGHV4-39*01  290  ..........--------------------------------------------------------------------------------  299
                                      C  A  R                                                                                   
D  92.3% (12/13)    IGHD6-19*01  7    -----------------.......G.....------------------------------------------------------------  19
J  93.8% (45/48)    IGHJ4*02     1    ------------------------------------------------------.....T.T....A.......................  36

                                                  
                                      T  V  S  S  
                    Query_1102   361  CCGTCTCCTCAG  372
J  93.8% (45/48)    IGHJ4*02     37   ............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_349660

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           330     1e-92
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  A  L  E 
                    Query_1103   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGCACTGGAG  90
V  93.1% (228/245)  IGHV4-59*08  49   ...........................................G......................................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  F  Y  T  G  T  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1103   91   TGGATCGGGTCTATCTTTTACACTGGGACCACCAACTACGACCCCTCTCTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGAAC  180
V  93.1% (228/245)  IGHV4-59*08  139  .....T....A.....A.....G.....G..........A.......C....................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  V  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  H  R  A  A  A  G  P 
                    Query_1103   181  CAGTTCTCCCTGAGAGTGACCTCTCTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATCCCCATAGAGCAGCAGCTGGCCCC  270
V  93.1% (228/245)  IGHV4-59*08  229  .............AGC...G....G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD6-13*01  7    --------------------------------------------------------------------------............----  18
J  93.2% (41/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_1103   271  TTTGACAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  313
J  93.2% (41/44)    IGHJ4*02     6    ......T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_263938

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           399     3e-113
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGAGCG	GCACTGGCTGGTA	TTTGGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGAGCGGCACTGGCTGGTATTTGGCCTAC	ARGSGTGWYLAY	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	105	9	0	92.1
CDR3-IMGT (germline)	291	297	7	6	1	0	85.7
Total	N/A	N/A	295	275	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  M  F  T 
                    Query_1104   3    CAGGTTCAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCCAGGCTTCTGGTTACATGTTTACC  92
V  93.2% (275/295)  IGHV1-18*04  1    .........................C........................................A...............CC......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  G  Y  N  G  N  T  K  Y 
                    Query_1104   93   ACTTACGGCATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGCTGGGATGGATCAGCGGCTACAATGGTAACACAAAGTAT  182
V  93.2% (275/295)  IGHV1-18*04  91   .GC.....T..........................................A...............CT.................C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  L  Q  D  R  V  T  L  T  I  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_1104   183  GCACAGAACCTCCAGGACAGAGTCACCCTGACCATAGACACATCTACGAGCACTGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGAC  272
V  93.2% (275/295)  IGHV1-18*04  181  ........G.......G..........A......C.........C........A.....C..............................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  V  Y  Y  C  A  R  G  S  G  T  G  W  Y  L  A  Y  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_1104   273  ACGGCCGTCTATTACTGTGCGCGAGGGAGCGGCACTGGCTGGTATTTGGCCTACTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  360
V  93.2% (275/295)  IGHV1-18*04  271  ........G............A...---------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                 
D  92.3% (12/13)    IGHD6-19*01  8    -------------------------------...G.........--------------------------------------------  20
J  97.4% (37/38)    IGHJ4*02     11   --------------------------------------------------......................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_101303

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           346     2e-97
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATGG	GGTTCGAGGA	CACTCGACCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTTCGAGGACACTCGACCGTTTTTGATATC	ARDGVRGHSTVFDI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  N  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1105   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTAACTCTTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (232/243)  IGHV4-59*08  49   ........................................G....T...AC.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_1105   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTATAATCCCTCCCTTAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  95.5% (232/243)  IGHV4-59*08  139  ......................................C..C........C.....................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  V  R  G  H  S  T  V 
                    Query_1105   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGATGGGGTTCGAGGACACTCGACCGTT  270
V  95.5% (232/243)  IGHV4-59*08  229  ....................C........C.......................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD3-10*01  11   --------------------------------------------------------------------......G...------------  20
J  93.2% (41/44)    IGHJ3*02     7    -----------------------------------------------------------------------------------------.  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  T  I  I  V  S  S  
                    Query_1105   271  TTTGATATCTGGGGCCAAGGGACAACGATCATCGTCTCTTCAG  313
J  93.2% (41/44)    IGHJ3*02     8    .........................T.G...C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_271720

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           413     2e-117
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	291	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	72	2	0	97.3
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	295	5	5	0	0	100
Total	N/A	N/A	292	278	14	0	95.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  
                    Query_1106   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCA  93
V  95.2% (278/292)  IGHV5-51*01  2    .................................................................A...G............C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  H  W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  
                    Query_1106   94   CCCACTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACA  183
V  95.2% (278/292)  IGHV5-51*01  92   G.T......................G.T..........................G..............G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  
                    Query_1106   184  GCCCGTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACA  273
V  95.2% (278/292)  IGHV5-51*01  182  ...................G.........................T.........................A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------CDR3-IMGT--------->                                 
                                      T  A  I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1106   274  CCGCCATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  353
V  95.2% (278/292)  IGHV5-51*01  272  .......G..T...........----------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ----------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_349664

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           388     5e-110
IGHD2-2*01                                                                                            10.3    135   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-2*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCAAGGC	ACCAG	TTTCCTCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCAAGGCACCAGTTTCCTCTTACTTTGACTAC	ARDPKAPVSSYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  F  T  Y 
                    Query_1107   2    CAGCTGGTGCAGTCTGGAGCCGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCCGGGTACACCTTTTTCACCTAC  91
V  92.8% (269/290)  IGHV1-18*04  7    ....................T...............................................T..T.........AC..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  V  Y  N  G  N  S  N  Y  A  Q 
                    Query_1107   92   GGCATCCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGTTTACAATGGTAACTCAAACTATGCACAG  181
V  92.8% (269/290)  IGHV1-18*04  97   ..T...AG.....................................................C.............A..............  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  P  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  G  L  R  S  P  R  *  D  A  S  A 
                    Query_1107   182  AAACCCCAAGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGGGCTGAGGAGCCCCAGATAAGACGCCTCGGCC  271
V  92.8% (269/290)  IGHV1-18*04  187  ..G.T...G.................................................A...........TG....CT....A.A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  D  P  K  A  P  V  S  S  Y  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_1107   272  GTGTATTACTGTGCGAGAGATCCCAAGGCACCAGTTTCCTCTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  359
V  92.8% (269/290)  IGHV1-18*04  277  ....................--------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (5/5)     IGHD2-2*01   17   -----------------------------.....------------------------------------------------------  21
J  97.8% (45/46)    IGHJ4*02     3    ------------------------------------------.................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_271722

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           311     4e-87
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CG	TGGGTCGGG	AGCCGCCTCAGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGTGGGTCGGGAGCCGCCTCAGGGCTAC	ARGVGREPPQGY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  F  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1108   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGTCCTTCAGTTCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  90.6% (222/245)  IGHV4-34*01  49   .........................A................GG..............................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  R  G  I  A  N  Y  K  P  S  L  K  S  R  V  A  I  S  I  D  T  S  K  N 
                    Query_1108   91   TGGATTGGAGAAATCAATCATAGGGGAATCGCCAACTACAAGCCGTCCCTCAAGAGTCGAGTCGCCATATCCATTGACACCTCCAAAAAC  180
V  90.6% (222/245)  IGHV4-34*01  139  ........G..............T....G.A..........C.....................A.......AG.A.....G.....G...  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  H  L  N  F  V  T  A  A  D  T  G  V  Y  Y  C  A  R  G  V  G  R  E  P  P  Q  G 
                    Query_1108   181  CAGTTCTCCCTGCACCTGAATTTCGTGACCGCCGCGGACACGGGTGTTTATTATTGTGCGAGAGGCGTGGGTCGGGAGCCGCCTCAGGGC  270
V  90.6% (222/245)  IGHV4-34*01  229  ............A.G....GC.CT...................C...G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  88.9% (8/9)      IGHD3-10*01  10   -------------------------------------------------------------------...T.....--------------  18
J  97.4% (37/38)    IGHJ4*02     11   -----------------------------------------------------------------------------------------.  11

                                      -->                                  
                                       Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_1108   271  TACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.4% (37/38)    IGHJ4*02     12   ..........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_349666

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           357     1e-100
IGHD6-13*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTT	TATAACAGCAGTTGG	GTGCTCGA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTATAACAGCAGTTGGGTGCTCGATGACTTC	ARDFITAVGCSMTS	243	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  I  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1109   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAATCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-21*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  T  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1109   91   AGTGGGTCTCATCCATTAGTAGTAGTACTAGTTACATATATTATGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (239/250)  IGHV3-21*01  137  ...........................G............C..C..............................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------CDR3-IMGT---
                                      K  R  S  L  Y  L  H  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  I  T  A  V  G  
                    Query_1109   181  AGAGATCACTGTATCTGCACATGAACAACCTGAGAGCCGAGGACACGGCTGTCTACTACTGTGCGAGAGATTTTATAACAGCAGTTGGGT  270
V  95.6% (239/250)  IGHV3-21*01  227  ...AC..............A.......G........................G..T..............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD6-13*01  4    -------------------------------------------------------------------------....G......C...--  18

                                      ------------>                                
                                      C  S  M  T  S  G  A  R  E  P  W  S  P  S  P  
                    Query_1109   271  GCTCGATGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  315
J  97.4% (38/39)    IGHJ4*02     8    ------.....A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_146429

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           274     8e-76
IGHD6-13*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTGGT	CAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTGGTCAGCAGCTGACTGACTAC	ARDSGQQLTDY	263	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	23	1	0	95.8
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	262	147	111	3	33	75.5
CDR3-IMGT (germline)	263	270	8	8	0	0	100
Total	N/A	N/A	257	218	6	33	84.8


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  R  G  L  E  W  V  S  S  I  S  S  S 
                    Query_1110   14   TCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGT  103
V  84.8% (218/257)  IGHV3-21*01  73   ....................C..................................A..................................  162
                                       S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  S 

                                      -IMGT------><--------------------------------------------------------------------FR3-IMGT-
                                       S  S  H  I  Y  Y  G  D  S  V  K  G  R  F  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D 
                    Query_1110   104  AGTAGTCACATATATTATGGAGACTCAGTGAAGGGCCGATTCACCTATTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGAC  193
V  84.8% (218/257)  IGHV3-21*01  163  ......T.....---------------------------------..C..........................................  219
                                       S  S  Y  I                                   Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D 

                                      --------------------------------------------------------------------><-----------CDR3-IMGT
                                       D  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  G  Q  Q 
                    Query_1110   194  GACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGATTCTGGTCAGCAG  283
V  84.8% (218/257)  IGHV3-21*01  220  A..........................................................G.................-------------  296
                                       N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                
D  100.0% (9/9)     IGHD6-13*01  9    ------------------------------------------------------------------------------------......  14

                                      ----------->                                  
                                       L  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1110   284  CTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  329
D  100.0% (9/9)     IGHD6-13*01  15   ...-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -----.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_182269

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           308     4e-86
IGHD2-8*01                                                                                            10.3    120  
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	TCAC	AATGG	GGTCCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAGTCACAATGGGGTCCCACTACTACGGTTTGGACGTC	AQVTMGSHYYGLDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	223	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  S  S  T  F  T  F  N  T  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1111   1    GGTCCCTGAGACTCTCCTGTGCTTCATCTACATTCACCTTTAACACCTATGCCATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.6% (223/249)  IGHV3-23*01  47   ......................AG.C...GG...........G..G...........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  S  T  F  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_1111   91   AGTGGGTCTCAGGTATTAGTGGCAGTGGTGGCAGTACTTTCTACGCAGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  89.6% (223/249)  IGHV3-23*01  137  ............C.........T........T..C..A.A................A.......G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  L  M  D  S  L  R  A  E  D  T  A  T  Y  Y  C  A  Q  V  T  M  G  S  H  Y  
                    Query_1111   181  AGAATACCCTATATCTACTAATGGACAGCCTGAGAGCCGAGGACACGGCCACATATTACTGTGCGCAAGTCACAATGGGGTCCCACTACT  270
V  89.6% (223/249)  IGHV3-23*01  227  ....C..G..G.....G.A....A..........................GT.............A...---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD2-8*01   14   -------------------------------------------------------------------------.....------------  18
J  98.1% (52/53)    IGHJ6*02     10   ------------------------------------------------------------------------------------......  15

                                      ------------->                                 
                                      Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1111   271  ACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  98.1% (52/53)    IGHJ6*02     16   .....A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_182262

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           344     6e-97
IGHD3-9*01                                                                                            27.6    8e-04
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGGGAAG	TACGATCCTTTGACTGGTTA	ACCCC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGACCGGGAAGTACGATCCTTTGACTGGTTAACCCCCTACGACGGTATGGACGTC	VKDREVRSFDWLTPYDGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  K  F  T  F  S  K  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1112   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTAAATTCACCTTCAGCAAATATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  94.0% (235/250)  IGHV3-64*05  47   .............................GG............T.GC...........................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  H  V  S  G  I  S  R  Y  G  G  S  T  H  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1112   91   AACATGTTTCAGGAATTAGTCGTTATGGGGGTAGCACACACTACTCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-64*05  137  ..T.........CT......A..A..............T.....G.............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  E  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K  D  R  E  V  R  S  F  
                    Query_1112   181  AGAACACGCTGTATCTTGAAATGAGCAGTCTGCGAGCTGAGGACACGGCTGTGTATTACTGTGTGAAAGACCGGGAAGTACGATCCTTTG  270
V  94.0% (235/250)  IGHV3-64*05  227  ..............G..C..............A.....................................--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  90.0% (18/20)    IGHD3-9*01   5    ------------------------------------------------------------------------------......AT....  16

                                      R3-IMGT------------------------>                                 
                                      D  W  L  T  P  Y  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1112   271  ACTGGTTAACCCCCTACGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  90.0% (18/20)    IGHD3-9*01   17   ........---------------------------------------------------------  24
J  98.1% (51/52)    IGHJ6*02     11   -------------....T...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_146421

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            389     2e-110
IGHD3-3*01                                                                                            18.0    0.65  
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	CGGAAAGAGCGGACTCA	ATTTTTGGA	ATCATTGTGCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGCGGAAAGAGCGGACTCAATTTTTGGAATCATTGTGCCTTTTGACTAC	VRAERADSIFGIIVPFDY	273	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	25	2	0	92.6
FR3-IMGT	159	272	114	105	9	0	92.1
CDR3-IMGT (germline)	273	279	7	5	2	0	71.4
Total	N/A	N/A	279	264	15	0	94.6


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  D  R  A  A  W  N  W  
                    Query_1113  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCGACCGTGCTGCTTGGAACTGGA  90
V  94.6% (264/279)  IGHV6-1*01  26   ....................................................................A..A..................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  Y  D  Y  A  V  S  V  K  
                    Query_1113  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATATTACAGGTCCAAGTGGTATTATGATTATGCAGTATCTGTGAAGA  180
V  94.6% (264/279)  IGHV6-1*01  116  ..............................................C..................A......................A.  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  M  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  K  S  V  T  P  D  D  T  A  V  Y  Y  
                    Query_1113  181  GTCGAATGACCATCAATCCAGACACATCCAAGAACCAATTTTCCCTGCAGTTGAAGTCTGTGACTCCCGACGACACGGCTGTCTATTACT  270
V  94.6% (264/279)  IGHV6-1*01  206  .......A........C....................G..C.........C....C..............G...........G.......  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------------------CDR3-IMGT--------------------->                                  
                                     C  V  R  A  E  R  A  D  S  I  F  G  I  I  V  P  F  D  Y  W  D  Q  G  T  L  V  T  V  S  S  
                    Query_1113  271  GTGTCAGAGCGGAAAGAGCGGACTCAATTTTTGGAATCATTGTGCCTTTTGACTACTGGGACCAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  94.6% (264/279)  IGHV6-1*01  296  ...CA....---------------------------------------------------------------------------------  304
                                     C  A  R                                                                                   
D  100.0% (9/9)     IGHD3-3*01  9    --------------------------.........-------------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02    6    -----------------------------------------------.............G.............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_146423

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     3e-90
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	242	26	6	88.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_1114   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.3% (242/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_1114   91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.3% (242/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_1114   181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.3% (242/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_1114   271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.3% (242/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_146424

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           402     3e-114
IGHD2-15*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGAACAA	ATTGTAG	GTTTGGGTCCGGTTGGAAAAC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGAACAAATTGTAGGTTTGGGTCCGGTTGGAAAACTTGATTAC	ARDEQIVGLGPVGKLDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	274	17	0	94.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_1115   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAACCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGTTA  90
V  94.2% (274/291)  IGHV1-69*01  6    .................................G.....................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  M  F  N  T  V  K  Y  A  Q
                    Query_1115   91   TGTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATACCTATGTTTAATACAGTAAAGTACGCACA  180
V  94.2% (274/291)  IGHV1-69*01  96   ..C.........................................................C.....C...GG.....C...C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  N  T  A  Y  M  E  L  S  S  L  R  F  D  D  T  A
                    Query_1115   181  GAAGTTCCAGGGCAGAGTCACAATTACCGCGGACGAATCCACGAACACAGCCTACATGGAGCTGAGTAGCCTGCGATTTGACGACACGGC  270
V  94.2% (274/291)  IGHV1-69*01  186  .....................G......................G.....................C......A...C...G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  D  E  Q  I  V  G  L  G  P  V  G  K  L  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_1115   271  CGTCTATTATTGTGCGAGAGACGAACAAATTGTAGGTTTGGGTCCGGTTGGAAAACTTGATTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  94.2% (274/291)  IGHV1-69*01  276  ...G.....C...........---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-15*01  6    ----------------------------.......-------------------------------------------------------  12
J  97.6% (41/42)    IGHJ4*02     7    --------------------------------------------------------....C.............................  40

                                              
                                        S  S  
                    Query_1115   361  CTCCTCAG  368
J  97.6% (41/42)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_146425

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     1e-87
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	N/A	TAGAAATCC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAGAAATCCCTACGGTTTAGACGTC	AKDRNPYGLDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  F  A  M  T  W  V  R  Q  P  P  G  K  G  L  
                    Query_1116   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAGCAACTTTGCCATGACCTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-23*01  47   .....................C.......................G..A........G.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  A  S  G  D  G  T  Y  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  F  
                    Query_1116   91   AGTGGGTCTCGGGAATAAGTGCTTCTGGTGATGGCACATACTACGCAGACTCCGTGAAGGGCCGGCTCACCATCTCCAGAGACAATTTCA  180
V  90.0% (225/250)  IGHV3-23*01  137  ..........A.CT..T....G.AG.....G.A................................T.....................C..  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      N  N  T  L  Y  L  Q  I  N  S  L  R  V  D  D  T  A  I  Y  Y  R  A  K  D  R  N  P  Y  G  L  
                    Query_1116   181  ACAATACACTGTATCTGCAAATCAACAGCCTGAGAGTCGACGACACGGCCATTTATTACCGTGCGAAAGATAGAAATCCCTACGGTTTAG  270
V  90.0% (225/250)  IGHV3-23*01  227  .G..C..G..............G.............C...G.........G.A......T..........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
J  93.3% (42/45)    IGHJ6*02     14   -------------------------------------------------------------------------------.......A.G.  24

                                      ---->                             
                                      D  V  W  G  Q  G  N  T  V  T  V  S
                    Query_1116   271  ACGTCTGGGGCCAAGGGAACACGGTCACCGTCTC  304
J  93.3% (42/45)    IGHJ6*02     25   ..................C...............  58


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_182264

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           360     1e-101
IGHD3-10*01                                                                                           10.3    123   
IGHJ2*01                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CG	GGTTC	CATCTGTCCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGACGGGTTCCATCTGTCCCCCTACTGGTACTTCGATCTC	ARDGFHLSPYWYFDL	249	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	256	8	5	3	0	62.5
Total	N/A	N/A	256	243	13	0	94.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1117   1    GGTCCTTGAGACTCTCCTGTACAGCGTCTGGATTCACCTTTGGTGATTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  94.9% (243/256)  IGHV3-49*04  47   .....C...................T..........................T................................G....  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  T  Y  G  G  T  A  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_1117   91   AGTGGGTAGGTTTCATTAGAAGCAAGACTTATGGTGGGACAGCAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  94.9% (243/256)  IGHV3-49*04  137  .........................AG..............A................................................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------------CDR3
                                      D  S  K  S  I  A  F  L  R  M  D  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  D  G  F  H  L  
                    Query_1117   181  ATTCCAAAAGCATCGCCTTTCTGCGAATGGACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTGCCAGGGACGGGTTCCATCTGT  270
V  94.9% (243/256)  IGHV3-49*04  227  ..................A.....A....A......................................A.T..A..--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (5/5)     IGHD3-10*01  11   ------------------------------------------------------------------------------.....-------  15

                                      -IMGT----------------->                                  
                                      S  P  Y  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_1117   271  CCCCCTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCCTCAG  327
J  98.1% (52/53)    IGHJ2*01     1    ----........................................A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_146427

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD1-1*01                                                                                            14.1    8.3  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTACCCTA	AACTGGGACG	GACCTTCTGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTACCCTAAACTGGGACGGACCTTCTGCTTTTGACCAC	ARLTLNWDGPSAFDH	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  D  P  M  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_1118   1    ACCCTGTCCCTCACCTGCGCTGTCTCCGGTGACCCCATGACTAGTTATTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  91.8% (223/243)  IGHV4-59*01  49   ..................A.......T....G.T....C.G......C........C........................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  L  S  I  D  T  S  K  N 
                    Query_1118   91   TGGATTGGATATATCTACTACAGTGGGAGCACCAACTACAACCCTTCCCTCAGGAGTCGAGTCACCTTATCGATAGACACGTCCAAGAAC  180
V  91.8% (223/243)  IGHV4-59*01  139  ........G........T..........................C.......A.............A....AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       H  F  S  L  S  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  T  L  N  W  D  G  P  S 
                    Query_1118   181  CACTTCTCCCTGAGCCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGACTTACCCTAAACTGGGACGGACCTTCT  270
V  91.8% (223/243)  IGHV4-59*01  229  ..G..........AG................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD1-1*01   6    ------------------------------------------------------------------------......A...--------  15

                                      ----------->                                  
                                       A  F  D  H  W  G  R  G  T  L  V  A  V  S  S  
                    Query_1118   271  GCTTTTGACCACTGGGGCCGGGGAACCCTGGTCGCCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---......T.........A.............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_112928

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           319     2e-89
IGHD3-16*01                                                                                           18.0    0.60 
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	N/A	TTTGGGGTAGTT	TG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTTGGGGTAGTTTGGATGCCTTCGATATC	AKVWGSLDAFDI	264	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	149	45	23	1	21	51.1
FR3-IMGT	150	263	114	112	2	0	98.2
CDR3-IMGT (germline)	264	270	7	7	0	0	100
Total	N/A	N/A	270	239	10	21	88.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1119   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATGTTCAGTAGCTATGCCATGAACTGGGTCCGCCAGGCGCCAGGGAAGGGGCTGG  90
V  88.5% (239/270)  IGHV3-30*18  47   ....................................CC.............G....C................T.....C..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----------------CDR2-IMGT-----------------><------------------------------
                                      E  W  V  A  I  I  S  F  E  G  S  K  K  S  Y  D  G  S  N  E  Y  Y  A  D  S  V  K  G  R  F  
                    Query_1119   91   AGTGGGTGGCAATTATTTCATTTGAAGGAAGTAAGAAATCATATGATGGAAGTAATGAATACTATGCAGACTCCGTGAAGGGCCGATTCA  180
V  88.5% (239/270)  IGHV3-30*18  137  ...........G....---------------------...................A.................................  205
                                      E  W  V  A  V  I                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  S  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  
                    Query_1119   181  CCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAGCAGCCTGAGAGTTGAGGACACGGCTGTGTATTACTGTGCGAAAG  270
V  88.5% (239/270)  IGHV3-30*18  206  .............................................A...........C................................  295
                                      T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  

                                      -------CDR3-IMGT------------>                                  
                                      V  W  G  S  L  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1119   271  TTTGGGGTAGTTTGGATGCCTTCGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  333
D  91.7% (11/12)    IGHD3-16*01  15   .......G....---------------------------------------------------  26
J  95.9% (47/49)    IGHJ3*02     2    --------------.....T..T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_112929

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            349     2e-98
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	CT	GTATGGCAGTGGC	CTCCATGGGGGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATCTGTATGGCAGTGGCCTCCATGGGGGGATTGACTGC	AKDLYGSGLHGGIDC	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	251	9	9	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1120   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGACTATGCCATACACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  94.4% (237/251)  IGHV3-9*01   47   ..............................................T........G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  W  N  S  G  R  I  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_1120   91   AGTGGGTCTCAAGTATTAGTTGGAATAGTGGTAGGATATACTATGCGGACTCTGTGAAGGGCCGATTCTCCATCTCCAGAGACAACTCCA  180
V  94.4% (237/251)  IGHV3-9*01   137  ...........G......................C...GG............................A.................G...  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  V  Y  L  Q  M  N  S  L  G  A  E  D  T  A  L  Y  Y  C  A  K  D  L  Y  G  S  G  L  
                    Query_1120   181  AGAACTCCGTCTATTTGCAAATGAACAGTCTGGGAGCTGAGGACACGGCCCTCTATTACTGTGCAAAAGATCTGTATGGCAGTGGCCTCC  270
V  94.4% (237/251)  IGHV3-9*01   227  ........C.G...C.................A.................T.G..................-------------------  297
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  92.3% (12/13)    IGHD6-19*01  3    -------------------------------------------------------------------------....A........----  15

                                      ---------------->                                  
                                      H  G  G  I  D  C  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_1120   271  ATGGGGGGATTGACTGCTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  321
J  95.2% (40/42)    IGHJ4*02     7    ---------......A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_247981

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           313     1e-87
IGHD6-19*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	CCCACATTAA	TGGCTGG	AATGGGGAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCACATTAATGGCTGGAATGGGGAGTTTGACTAC	ARPHINGWNGEFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  S  Y  S  D  Y  L  A  W  I  R  Q  P  P  G  K  G 
                    Query_1121   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGTAGTTATAGTGACTACTTGGCCTGGATCCGCCAGCCCCCAGGGAAGGGT  90
V  90.0% (225/250)  IGHV4-39*01  49   ...............................G.........C...AG....T......G..G...........................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  V  H  Y  S  G  S  A  Y  Y  S  P  S  L  K  T  R  V  T  I  S  V  D  T  S 
                    Query_1121   91   CTGGAATGGATTGGGAGTGTCCACTACAGTGGGAGCGCCTACTACAGCCCGTCCCTCAAGACTCGAGTCACCATATCCGTGGACACGTCC  180
V  90.0% (225/250)  IGHV4-39*01  139  .....G............A..T.T..T.........A.........A..............G..................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       R  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  P  H  I  N  G  W  N 
                    Query_1121   181  AGGAACCAATTTTCTCTGAGGCTGACCTCTGTGACCGCCGCAGACACGGCTATCTATTACTGTGCGAGACCCCACATTAATGGCTGGAAT  270
V  90.0% (225/250)  IGHV4-39*01  229  .A......G..C..C....A.....G.........................G.G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD6-19*01  12   --------------------------------------------------------------------------------.......---  18

                                      -------------->                                
                                       G  E  F  D  Y  W  G  P  G  A  R  V  T  V  S  S
                    Query_1121   271  GGGGAGTTTGACTACTGGGGCCCGGGAGCCCGGGTCACCGTCTCCTC  317
J  92.7% (38/41)    IGHJ4*02     6    ------................A....A...T...............  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_247983

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	N/A	N/A	ATTTAGAATATCAGTTTTCACTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGAGAATTTAGAATATCAGTTTTCACTTACTACTTTGACTAC	A*EFRISVFTYYFDY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  A  S  I  K  N  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_1122   4    CCCTGAGACTCTCCTGTAGCGTCTCTGGTGCCTCCATCAAAAATTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  91.0% (222/244)  IGHV4-59*01  50   .....TCC...A....C.CT..........G........GT.G..A............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  E  D  T  S  K  N  
                    Query_1122   94   GGATTGGGTATATCTACTACAGTGGGAGCACCAACTATAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGAAGACACGTCCAAGAACC  183
V  91.0% (222/244)  IGHV4-59*01  140  ................T....................C..................................T.................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  *  E  F  R  I  S  V  F  T  Y  
                    Query_1122   184  AGTTCTCCCTGAAACTGACTTCTGTGACCGCTGCGGACACGGCCATTTATTATTGTGCGTGAGAATTTAGAATATCAGTTTTCACTTACT  273
V  91.0% (222/244)  IGHV4-59*01  230  .............G....GC........................G.G.....C......A....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  97.9% (47/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  F  D  Y  W  S  Q  G  T  L  V  T  V  S  S  
                    Query_1122   274  ACTTTGACTACTGGAGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.9% (47/48)    IGHJ4*02     4    ..............G..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_247982

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           335     4e-94
IGHD3-16*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCTAGGG	ATGCTTA	CAATCTATGCGGCT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAAAGACCTAGGGATGCTTACAATCTATGCGGCTGACCTC	TKDLGMLTIYAADL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  G  M  H  W  V  R  L  A  P  G  K  G  L  
                    Query_1123   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGCCTATGGCATGCACTGGGTCCGCCTGGCTCCAGGCAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-30*18  47   ............................................AG.......................A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  V  A  H  D  G  S  K  R  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1123   91   AGTGGGTGGCAGCTGTAGCCCATGATGGAAGTAAGAGATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-30*18  137  ............T.A..T.AT.............T.A.....................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  K  K  V  F  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  T  K  D  L  G  M  L  T  I  
                    Query_1123   181  AGAAAAAGGTGTTTCTACAAATGAACAGCCTGAGAGCTGAGGACACGGCTATCTATTACTGTACGAAAGACCTAGGGATGCTTACAATCT  270
V  92.8% (232/250)  IGHV3-30*18  227  ....C.C.C...A...G.................................G.G.........G.......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-16*01  27   -----------------------------------------------------------------------------.......------  33

                                      ------------->                                  
                                      Y  A  A  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1123   271  ATGCGGCTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.5% (39/40)    IGHJ5*02     12   --------....C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_112920

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           350     8e-99
IGHD3-10*01                                                                                           14.1    8.8  
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAAGAATTGAGGTGACGGCGCTTTCGGC	TTCGGGG	CTGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAAGAATTGAGGTGACGGCGCTTTCGGCTTCGGGGCTGATTTTTGACCGC	ARGRIEVTALSASGLIFDR	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  G  D  Y  F  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_1124   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACCAGTGGTGATTACTTCTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*01  49   ........................................G........G.....A.....G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  N  S  G  N  T  Y  Y  N  P  S  L  K  S  L  V  T  M  S  V  D  T  S 
                    Query_1124   91   CTGGAGTGGATTGGGTACATCTCTAACAGTGGGAACACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATGTCAGTGGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*01  139  ......................A.T.........G.......................................A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  R  S  M  T  A  A  N  T  A  V  Y  Y  C  A  R  G  R  I  E  V  T  A 
                    Query_1124   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTATGACTGCCGCGAACACGGCCGTGTATTATTGTGCGAGAGGAAGAATTGAGGTGACGGCG  270
V  94.8% (237/250)  IGHV4-31*01  229  ..........................C...G...........G................C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       L  S  A  S  G  L  I  F  D  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1124   271  CTTTCGGCTTCGGGGCTGATTTTTGACCGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  100.0% (7/7)     IGHD3-10*01  13   --------.......-------------------------------------------------  19
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_112921

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1125   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_1125   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_1125   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_1125   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_112922

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTCCCAGGGTGACCTAC	TACTATGATAATACTGGTTATT	TTTCCCCATACCC	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTCCCAGGGTGACCTACTACTATGATAATACTGGTTATTTTTCCCCATACCCCTTCGACTAC	ARSPRVTYYYDNTGYFSPYPFDY	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  V  R  Q  S  P  G  K  G  L  Q 
                    Query_1126   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTATTACTGGAGCTGGGTCCGGCAGTCCCCAGGGAAGGGACTGCAG  90
V  91.4% (222/243)  IGHV4-59*01  49   ........................................G......C............A........C.................G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  V  Y  Y  L  G  T  T  N  Y  N  P  S  L  Q  N  R  V  T  I  S  V  D  T  S  E  N 
                    Query_1126   91   TGGGTTGGCTATGTCTATTACCTTGGGACCACCAACTACAACCCCTCCCTACAGAATCGAGTCACCATTTCAGTTGACACGTCCGAGAAC  180
V  91.4% (222/243)  IGHV4-59*01  139  ...A....G...A........AG.....G.....................CA...G............A.....A.........A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  F  S  L  N  L  A  A  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  R  V  T  Y  Y  Y  D 
                    Query_1126   181  CAGTTCTCCCTGAACCTGGCCGCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAAGTCCCAGGGTGACCTACTACTATGAT  270
V  91.4% (222/243)  IGHV4-59*01  229  ..............G...AG.T.........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.9% (20/22)    IGHD3-22*01  5    ---------------------------------------------------------------------------------.........  13

                                      3-IMGT----------------------------->                                  
                                       N  T  G  Y  F  S  P  Y  P  F  D  Y  W  G  H  G  I  L  A  T  V  S  S  
                    Query_1126   271  AATACTGGTTATTTTTCCCCATACCCCTTCGACTACTGGGGCCACGGAATCCTGGCCACCGTCTCCTCAG  340
D  90.9% (20/22)    IGHD3-22*01  14   .G..G........---------------------------------------------------------  26
J  90.9% (40/44)    IGHJ4*01     5    --------------------------...T..............A....C.....T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_112923

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            271     7e-75
IGHD2-8*02                                                                                            14.1    8.7  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CC	GTGGTCTATG	TCAGCGCGTGGTCTACGTATTATTAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGTGGTCTATGTCAGCGCGTGGTCTACGTATTATTATTACGGTATGGACGTC	ARAVVYVSAWSTYYYYGMDV	239	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	10	1	0	90.9
CDR1-IMGT	26	49	24	20	4	0	83.3
FR2-IMGT	50	100	51	47	4	0	92.2
CDR2-IMGT	101	124	24	20	4	0	83.3
FR3-IMGT	125	238	114	98	16	0	86
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	231	202	29	0	87.4


Alignments

                                     <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                        T  A  S  G  F  T  F  S  D  Y  W  M  A  W  V  R  Q  G  P  G  K  G  L  E  W  V  A  N  I  
                    Query_1127  15   GTACAGCCTCTGGATTCACTTTTAGTGATTATTGGATGGCATGGGTCCGCCAGGGTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAA  104
V  87.4% (202/231)  IGHV3-7*03  65   ..G................C......AGC.........AGC.............C...................................  154
                                        A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                     ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                     K  Q  D  G  T  E  K  Y  Y  A  D  S  V  R  G  R  L  A  I  S  R  D  N  A  Q  N  T  A  F  L  
                    Query_1127  105  AACAGGATGGAACTGAAAAATACTATGCGGACTCAGTGAGGGGCCGCCTCGCCATCTCCAGAGACAACGCCCAGAATACAGCATTTCTGC  194
V  87.4% (202/231)  IGHV3-7*03  155  .G..A.......G...G..........T......T....A......AT..A....................A....CT..CTG.A.....  244
                                     K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                     -------------------------------------------><-------------------------CDR3-IMGT-----------
                                     Q  M  N  N  L  R  A  E  D  T  A  V  Y  F  C  A  R  A  V  V  Y  V  S  A  W  S  T  Y  Y  Y  
                    Query_1127  195  AAATGAACAACCTGAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAGAGCCGTGGTCTATGTCAGCGCGTGGTCTACGTATTATTATT  284
V  87.4% (202/231)  IGHV3-7*03  245  .........G........................G....A...........---------------------------------------  295
                                     Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  90.0% (9/10)     IGHD2-8*02  15   -----------------------------------------------------.....G....---------------------------  24
J  95.8% (46/48)    IGHJ6*02    15   -----------------------------------------------------------------------------------------.  15

                                     ------------->                                 
                                     Y  G  M  D  V  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_1127  285  ACGGTATGGACGTCTGGGGCCAAGGGACCGCGGTCACCGTCTCTTCA  331
J  95.8% (46/48)    IGHJ6*02    16   .............................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_112924

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           399     3e-113
IGHD7-27*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGTCCTTTTA	CTAACTGGGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGTCCTTTTACTAACTGGGGTTGACTTT	AVLLLTGVDF	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	270	15	0	94.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  N  Y
                    Query_1128   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACAGCTTTACCAACTA  90
V  94.7% (270/285)  IGHV5-51*03  6    .............................................................A........................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  G  W  V  R  Q  R  P  G  E  G  L  E  W  M  G  L  I  Y  P  G  D  S  D  T  R  Y  N  S
                    Query_1128   91   CTTCATCGGCTGGGTGCGCCAGAGGCCCGGGGAAGGCCTGGAGTGGATGGGGCTCATTTATCCTGGTGACTCTGATACCAGGTACAACTC  180
V  94.7% (270/285)  IGHV5-51*03  96   ..GG...................T.......A....................A....C.......................A....G.C.  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1128   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.7% (270/285)  IGHV5-51*03  186  ...............G............................G..........C..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        I  Y  Y  C  A  V  L  L  L  T  G  V  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1128   271  CATTTATTACTGTGCAGTCCTTTTACTAACTGGGGTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  347
V  94.7% (270/285)  IGHV5-51*03  276  ...G...........--------------------------------------------------------------  290
                                        M  Y  Y  C  A                                                              
D  100.0% (10/10)   IGHD7-27*01  1    -------------------------..........------------------------------------------  10
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_247988

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           360     1e-101
IGHD2-2*01                                                                                            27.6    7e-04 
IGHJ6*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	237	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1129   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAACTGGATCCGGCAACCCCCAGGGAAGGGACTGGAG  90
V  97.1% (237/244)  IGHV4-59*01  49   ...........................................G...........G............G.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  Q  S  R  L  T  I  S  V  D  T  S  K  N 
                    Query_1129   91   TGGATTGGGTATATCTATTACACTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGACTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.1% (237/244)  IGHV4-59*01  139  ......................G............................A........G.............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y 
                    Query_1129   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCAGCGGACACGGCCGTGTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTAC  270
V  97.1% (237/244)  IGHV4-59*01  229  ................................T...............................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD2-2*01   8    ---------------------------------------------------------------------........T........----  24
J  88.5% (46/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_1129   271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  318
J  88.5% (46/52)    IGHJ6*02     15   ...GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_112926

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           321     7e-90
IGHD3-10*01                                                                                           18.0    0.58 
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	TTCTCTTGGCCATTTT	TATGGTTCG	AGTT	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTCTCTTGGCCATTTTTATGGTTCGAGTTCTTTTGATATG	ARGSLGHFYGSSSFDM	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  G  A  S  F  S  D  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1130   1    ACCCTGTCCCTCACCTGCACTGTCTATGGTGCGTCCTTCAGTGATTACTTCTGGAACTGGATCCGCCAGCCCCCGGGGAAGGGGCTGGAG  90
V  91.8% (225/245)  IGHV4-34*01  49   ..................G............G...........G.....A.....G..................A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  G  T  N  Y  N  P  S  L  M  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_1130   91   TGGATTGGGGAGATCAATCATAGTGGAGGTACCAACTACAACCCGTCCCTGATGAGTCGAGTCACCATATCAATTGACACGTCTAAGAAC  180
V  91.8% (225/245)  IGHV4-34*01  139  ...........A...............A.C....................C.A...................G.A........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  V  K  L  K  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  G  S  L  G  H  F  Y  G  S 
                    Query_1130   181  CAGTTCTCCGTGAAGTTGAAGTCTGTGGCCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAGGTTCTCTTGGCCATTTTTATGGTTCG  270
V  91.8% (225/245)  IGHV4-34*01  229  .........C.....C...GC......A...................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (9/9)     IGHD3-10*01  8    ---------------------------------------------------------------------------------.........  16

                                      -------------->                                  
                                       S  S  F  D  M  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1130   271  AGTTCTTTTGATATGTGGGGCCAAGGGACGCTGGTCACCGTCTCTTCAG  319
J  93.3% (42/45)    IGHJ3*02     6    ----..........C..............AA..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_112927

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           346     2e-97
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AC	ATTACGATTTTTCGAGTGGT	CTCATTATCGGAAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACATTACGATTTTTCGAGTGGTCTCATTATCGGAACTGACTAC	AREHYDFSSGLIIGTDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  R  G  S  Y  Y  W  S  W  N  R  Q  S  P  G  K  G 
                    Query_1131   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGAGGTTCTTACTACTGGAGTTGGAACCGGCAGTCCCCAGGGAAGGGA  90
V  94.0% (236/251)  IGHV4-61*01  49   .........................................C..T...AG............C....T.......C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  H  S  G  S  T  N  Y  H  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_1131   91   CTGGAGTGGATTGGGTATATTTATCACAGTGGGAGCACCAACTATCACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCC  180
V  94.0% (236/251)  IGHV4-61*01  139  ....................C...T...................CA................................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  H  Y  D  F  S  S 
                    Query_1131   181  AAGAACCAGTTCTCCCTGAAGCTGAATTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGAACATTACGATTTTTCGAGT  270
V  94.0% (236/251)  IGHV4-61*01  229  .........................GC..........................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-3*01   3    -------------------------------------------------------------------------............G....  19

                                      MGT-------------------->                                  
                                       G  L  I  I  G  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1131   271  GGTCTCATTATCGGAACTGACTACTGGGGCCAGGGTACCCTGGTCACCGTCTCCTCAG  328
D  95.0% (19/20)    IGHD3-3*01   20   ...-------------------------------------------------------  22
J  97.6% (40/41)    IGHJ4*02     8    -----------------..................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_188142

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           315     5e-88
IGHD4-17*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGTAGGG	ACGGTGACTAC	GGGGCGGGGCTTGAACAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCGTAGGGACGGTGACTACGGGGCGGGGCTTGAACAT	ARERRDGDYGAGLEH	230	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	20	4	0	83.3
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	24	0	0	100
FR3-IMGT	116	229	114	107	7	0	93.9
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	213	12	0	94.7


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  L  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  W  Y  D
                    Query_1132   13   GTCTGGATTCACCTTAAGTTCCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGTCAGTTATATGGTATGA  102
V  94.7% (213/225)  IGHV3-33*01  72   ...............C...AG.....G..............................................G................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  E  S  K  N  T  M  H  L  Q  M  N
                    Query_1132   103  TGGAAGTAATAAATACTATGCAGACGCCGTGAAGGGCCGATTCACCATCTCCAGAGACGAATCCAAGAACACGATGCATCTGCAAATGAA  192
V  94.7% (213/225)  IGHV3-33*01  162  .........................T................................A.T............C..T.............  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------CDR3-IMGT----------------->        
                                        S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  R  R  D  G  D  Y  G  A  G  L  E  H  W  G  Q
                    Query_1132   193  CAGCCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGCGAGAGAGCGTAGGGACGGTGACTACGGGGCGGGGCTTGAACATTGGGGCCA  282
V  94.7% (213/225)  IGHV3-33*01  252  .........................G.G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (11/11)   IGHD4-17*01  6    -----------------------------------------------------...........--------------------------  16
J  100.0% (34/34)   IGHJ4*02     15   ----------------------------------------------------------------------------------........  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_1132   283  GGGAACCCTGGTCACCGTCTCCTCAG  308
J  100.0% (34/34)   IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_291652

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           325     3e-91
IGHD3-22*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	230	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	20	4	0	83.3
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	24	0	0	100
FR3-IMGT	116	229	114	110	4	0	96.5
CDR3-IMGT (germline)	230	236	7	7	0	0	100
Total	N/A	N/A	224	216	8	0	96.4


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  H  F  D  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_1133   13   GTCTGGATTCACCTTCAGTCACTTTGACATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  96.4% (216/224)  IGHV3-33*01  72   ...................AG..A..G...............................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N
                    Query_1133   103  TGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACGTTGTATCTGCAAATGAA  192
V  96.4% (216/224)  IGHV3-33*01  162  .............................................................T...........C................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------------------CDR3-IMGT---------------------
                                        S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  T  T  G  R  D  P  F  D  I
                    Query_1133   193  CAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATAT  282
V  96.4% (216/224)  IGHV3-33*01  252  .......A...................G................----------------------------------------------  295
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  88.9% (16/18)    IGHD3-22*01  5    -------------------------------------------------------..........G..G....-----------------  22
J  94.0% (47/50)    IGHJ3*02     1    ---------------------------------------------------------------------------....G..........  15

                                      >                                  
                                        W  G  Q  G  T  I  L  T  V  S  S  
                    Query_1133   283  CTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  317
J  94.0% (47/50)    IGHJ3*02     16   ..................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_305539

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_1134   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1134   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_1134   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1134   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_230704

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-10*01                                                                                           10.3    118  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACA	GGGGA	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACAGGGGATACTACGGTATGGACGTC	ARDDRGYYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_1135   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTATTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   .....................................................C.A.....G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  H  Y  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S 
                    Query_1135   91   CTGGAGTGGATTGGGAACATCCATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ...............T.....T...................C.................G........T.....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  E  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  D  D  R  G  Y  Y  G 
                    Query_1135   181  AAGAACCAGTTCTCCCTGGAGCTGACCTCTATGACAGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGATGACAGGGGATACTACGGT  270
V  94.4% (237/251)  IGHV4-31*03  229  ..................A......G....G....T.................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------------.....---------  20
J  96.0% (48/50)    IGHJ6*02     12   ---------------------------------------------------------------------------------.........  20

                                      -------->                                
                                       M  D  V  W  G  Q  G  I  T  V  T  V  S  S
                    Query_1135   271  ATGGACGTCTGGGGCCAAGGGATTACGGTCACCGTCTCCTC  311
J  96.0% (48/50)    IGHJ6*02     21   ......................CC.................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_216334

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     8e-121
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGGACAC	TGTAGTAGTGCCATCTGCGATG	GACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTAC	ARHMGHCSSAICDGPDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	281	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  Q  K  P  G  E  A  L  K  I  S  C  K  G  S  G  Y  S  F  G  S  Y
                    Query_1136   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGCAAAAGCCGGGGGAGGCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCAGTTA  90
V  96.6% (281/291)  IGHV5-51*01  6    ............................A.......C......T......................................AC...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_1136   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.6% (281/291)  IGHV5-51*01  96   ........G.................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_1136   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  96.6% (281/291)  IGHV5-51*01  186  .............................C.........C.................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  M  G  H  C  S  S  A  I  C  D  G  P  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_1136   271  CATGTATTACTGTGCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  96.6% (281/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  86.4% (19/22)    IGHD2-2*01   8    -------------------------------.........A...G....T...-------------------------------------  29
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_1136   361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_216335

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-16*02                                                                                           14.1    8.9  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	261	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	18	6	0	75
FR2-IMGT	75	125	51	47	4	0	92.2
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	106	8	0	93
CDR3-IMGT (germline)	261	266	6	6	0	0	100
Total	N/A	N/A	266	243	23	0	91.4


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  Y  W  S  W  I  R  
                    Query_1137   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTACTGGAGTTGGATCCGGC  90
V  91.4% (243/266)  IGHV4-59*01  26   ................T...................................T..........GTAG..A.........C..........  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  
                    Query_1137   91   AGCCCCCAGGGAAGGGACTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCA  180
V  91.4% (243/266)  IGHV4-59*01  116  .....................A.........GT............G......CAC..A.........................G.CA...  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      M  S  V  D  T  S  K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  
                    Query_1137   181  TGTCAGTAGACACGTCCAAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACAC  270
V  91.4% (243/266)  IGHV4-59*01  206  .A.................G................A.................................G...............----  291
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      --------CDR3-IMGT----------------->                                  
                                      R  H  I  D  G  Y  R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_1137   271  GGCACATTGATGGTTATCGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  339
D  100.0% (7/7)     IGHD3-16*02  24   ------------.......--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    -------------------.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_216336

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           386     2e-109
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GGGACT	AGGATATTGTCGTGGTACC	GACTGCAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGGACTAGGATATTGTCGTGGTACCGACTGCACCTACTACGGTTTGGACGTC	ARGLGYCRGTDCTYYGLDV	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	105	9	0	92.1
CDR3-IMGT (germline)	292	296	5	4	1	0	80
Total	N/A	N/A	293	270	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  S  F  S 
                    Query_1138   4    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCAGTTTCAGC  93
V  92.2% (270/293)  IGHV1-69*12  1    ...........G...........G..........................................................CC......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  D  A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  L  I  P  I  F  G  I  L  N  Y 
                    Query_1138   94   GACGATGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCCTCATCCCTATCTTTGGTATATTAAACTAC  183
V  92.2% (270/293)  IGHV1-69*12  91   AG.T.........G.............................................GA..................C.GC.......  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  R  G  R  V  T  I  S  V  D  E  S  T  S  T  T  Y  M  E  L  S  S  L  G  S  D  D 
                    Query_1138   184  GCACAGAAATTCCGGGGCAGAGTCACGATTTCCGTGGACGAGTCCACGAGCACAACCTACATGGAGCTGAGCAGCCTGGGATCTGACGAC  273
V  92.2% (270/293)  IGHV1-69*12  181  ........G....A................A...C......A............G.......................A.......G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  V  Y  F  C  A  R  G  L  G  Y  C  R  G  T  D  C  T  Y  Y  G  L  D  V  W  G  Q  G  T 
                    Query_1138   274  ACGGCCGTGTATTTCTGTGCAAGGGGACTAGGATATTGTCGTGGTACCGACTGCACCTACTACGGTTTGGACGTCTGGGGCCAGGGGACC  363
V  92.2% (270/293)  IGHV1-69*12  271  .............A......G..-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  89.5% (17/19)    IGHD2-2*01   1    -----------------------------..........A..A.....------------------------------------------  19
J  94.2% (49/52)    IGHJ6*02     11   --------------------------------------------------------..........A................A......  44

                                                        
                                       T  V  I  V  S  S 
                    Query_1138   364  ACGGTCATCGTCTCCTCA  381
J  94.2% (49/52)    IGHJ6*02     45   .......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_216337

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           335     4e-94
IGHD2-15*01                                                                                           12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGGGGCCCGAGC	GGTGGT	CACCGCCAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGGGGCCCGAGCGGTGGTCACCGCCAGTTTGACTCC	AKRGPSGGHRQFDS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1139   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCGGCAGCTATGGCATGCACTGGGTCCGCCAGGCTCCTGGCAAGGGGCTGG  90
V  93.1% (231/248)  IGHV3-30*18  47   .........................................A.T................................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  L  A  A  I  S  Y  D  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  M  S  
                    Query_1139   91   ATTGGTTGGCAGCTATTTCATATGATGGAAGTAATACATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCCGAGACATGTCCA  180
V  93.1% (231/248)  IGHV3-30*18  137  .G...G......T...A...................A........................................A......AT....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  H  T  P  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  R  G  P  S  G  G  H  
                    Query_1139   181  AGCACACCCCCTATCTCCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTTTATTACTGTGCGAAAAGGGGCCCGAGCGGTGGTCACC  270
V  93.1% (231/248)  IGHV3-30*18  227  ..A....G.TG.....G...................................G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-15*01  14   --------------------------------------------------------------------------------......----  19

                                      ------------->                                  
                                      R  Q  F  D  S  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_1139   271  GCCAGTTTGACTCCTGGGGCCAGGGAACCCTGGTCATCGTCTCGTCAG  318
J  93.0% (40/43)    IGHJ4*02     6    -----.......A.......................C......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_216330

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            420     7e-120
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	274	5	0	98.2


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_1140  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  98.2% (274/279)  IGHV6-1*01  26   ...........................................................G......G....AG.................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_1140  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.2% (274/279)  IGHV6-1*01  116  ..........................................................................................  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_1140  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.2% (274/279)  IGHV6-1*01  206  ..............A...........................................................................  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------CDR3-IMGT--------->                                  
                                     C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1140  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  98.2% (274/279)  IGHV6-1*01  296  .........---------------------------------------------------------  304
                                     C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02    4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_216331

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-58*01                                                                                           410     1e-116
IGHD1-1*01                                                                                            10.3    135   
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-58*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGGC	GCTGGGCACTAACC	ACGAC	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGCGCTGGGCACTAACCACGACAACTACGGTTTGGACGTC	VALGTNHDNYGLDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	288	275	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  P  E  V  K  K  P  G  T  S  V  K  V  S  C  Q  A  S  G  F  H  F  S  S  S
                    Query_1141   1    GCAGCTGGTGCAGTCTGGGCCTGAGGTGAAGAAGCCTGGGACCTCAGTGAAGGTCTCCTGCCAGGCTTCTGGATTCCACTTTTCTTCCTC  90
V  95.5% (275/288)  IGHV1-58*01  6    .............................................................A..............AC....A..AG...  95
                                        Q  L  V  Q  S  G  P  E  V  K  K  P  G  T  S  V  K  V  S  C  K  A  S  G  F  T  F  T  S  S

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  Q  W  V  R  Q  A  R  G  Q  R  L  E  W  I  G  W  I  V  V  G  S  G  N  T  N  Y  A  Q
                    Query_1141   91   TGCTGTGCAGTGGGTGCGACAGGCTCGTGGACAACGCCTTGAGTGGATAGGATGGATCGTCGTTGGCAGTGGTAACACAAATTACGCACA  180
V  95.5% (275/288)  IGHV1-58*01  96   .................................................................................C........  185
                                        A  V  Q  W  V  R  Q  A  R  G  Q  R  L  E  W  I  G  W  I  V  V  G  S  G  N  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  E  R  V  T  L  T  T  D  M  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_1141   181  GAAGTTCCAGGAAAGAGTCACCCTTACCACGGACATGTCCACAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCCGAGGACACGGC  270
V  95.5% (275/288)  IGHV1-58*01  186  ......................A......G............................................................  275
                                        K  F  Q  E  R  V  T  I  T  R  D  M  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                 
                                        V  F  Y  C  V  A  L  G  T  N  H  D  N  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1141   271  CGTATTTTATTGTGTGGCGCTGGGCACTAACCACGACAACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  358
V  95.5% (275/288)  IGHV1-58*01  276  ...G.A...C....C...----------------------------------------------------------------------  293
                                        V  Y  Y  C  A  A                                                                      
D  100.0% (5/5)     IGHD1-1*01   13   --------------------------------.....---------------------------------------------------  17
J  98.0% (49/50)    IGHJ6*02     13   --------------------------------------........A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_216332

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD3-22*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTTTG	ACTATGATAGTAGTGGT	ACTTACCACGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTTGACTATGATAGTAGTGGTACTTACCACGTTTTTGACTAC	ARFDYDSSGTYHVFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	235	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1142   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (235/242)  IGHV4-59*01  49   ..............................................A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  N 
                    Query_1142   91   TGGATTGGATATATCTATTACAGTGGCAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCCAGGAAC  180
V  97.1% (235/242)  IGHV4-59*01  139  ........G.................G..C..........................................G............A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  D  Y  D  S  S  G  T  Y 
                    Query_1142   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTTTGACTATGATAGTAGTGGTACTTAC  270
V  97.1% (235/242)  IGHV4-59*01  229  ....................C.........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (17/17)   IGHD3-22*01  6    -------------------------------------------------------------------.................------  22

                                      -------------->                                  
                                       H  V  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1142   271  CACGTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_216333

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           308     4e-86
IGHD2-15*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CTCATGGTCCCAATCCGACCTTATGGG	AGTGGTGG	CAGATCTTCA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTCATGGTCCCAATCCGACCTTATGGGAGTGGTGGCAGATCTTCATGACTCC	ARDSWSQSDLMGVVADLHDS	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	20	4	0	83.3
FR2-IMGT	49	99	51	49	2	0	96.1
CDR2-IMGT	100	123	24	22	2	0	91.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	233	215	18	0	92.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  I  F  S  N  Y  G  M  H  W  V  R  Q  A  P  V  K  G  L  E  W  L  A  V  I 
                    Query_1143   13   TGTGCAGCCTCTGGATTCATTTTCAGTAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGTCAAGGGGCTGGAGTGGCTGGCAGTTATT  102
V  92.3% (215/233)  IGHV3-30*03  64   ...................CC.......GC...............................G................G..........A  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  Y  D  G  N  N  K  F  Y  G  D  S  V  K  D  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_1143   103  TCATATGATGGAAATAATAAATTCTATGGAGACTCTGTGAAGGACCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTATATCTG  192
V  92.3% (215/233)  IGHV3-30*03  154  .............G........A.....C......C.......G.......................................G......  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-------------------------CDR3-IMGT----------
                                       H  M  N  T  L  R  P  E  D  T  G  V  Y  Y  C  A  R  D  S  W  S  Q  S  D  L  M  G  V  V  A 
                    Query_1143   193  CACATGAACACCCTGAGACCTGAGGACACGGGTGTCTATTACTGTGCGAGAGACTCATGGTCCCAATCCGACCTTATGGGAGTGGTGGCA  282
V  92.3% (215/233)  IGHV3-30*03  244  ..A.......G.......G............C...G.................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (8/8)     IGHD2-15*01  11   --------------------------------------------------------------------------------........--  18

                                      -------------->                                  
                                       D  L  H  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1143   283  GATCTTCATGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  97.6% (40/41)    IGHJ4*02     8    --------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_188146

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TATG	AGTAGTGG	CTCCGTCCCGGACTACCAGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATATGAGTAGTGGCTCCGTCCCGGACTACCAGCACTACGGAATGGACGTC	ARDMSSGSVPDYQHYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  H  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1144   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACGTTCAGTACCCATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-33*01  47   .....................................C.......G.T...G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  Y  D  G  S  N  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1144   91   AGTGGGTGGCACTTATATGGTATGATGGAAGTAATAAGTATTACGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-33*01  137  ...........G.........................A..C..T.C............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      N  N  R  A  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  M  S  S  G  S  V  
                    Query_1144   181  ACAACAGGGCGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTATTGTGCGAGAGATATGAGTAGTGGCTCCGTCC  270
V  93.6% (234/250)  IGHV3-33*01  227  .G....C.CT.........A................................G.....C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-22*01  14   --------------------------------------------------------------------------........--------  21

                                      -IMGT----------------------->                                 
                                      P  D  Y  Q  H  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1144   271  CGGACTACCAGCACTACGGAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  98.0% (49/50)    IGHJ6*02     13   ------------.......T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_216338

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           272     2e-75
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ3*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGCCCCATT	TTACTATGATAGTCGTGGTT	TTCACCA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGCCCCATTTTACTATGATAGTCGTGGTTTTCACCATGATGTCTTTGATCTG	ARRAPFYYDSRGFHHDVFDL	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	209	35	0	85.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  L  S  G  G  P  I  T  G  S  Y  W  N  W  F  R  Q  S  P  G  M  G  L  E 
                    Query_1145   1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGGCCCCATTACTGGCTCCTACTGGAACTGGTTCCGGCAGTCCCCAGGTATGGGACTGGAG  90
V  85.7% (209/244)  IGHV4-59*08  49   .....................G...........T....C.G.A.T.A........G....A........C.......G.A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  T  G  A  T  Y  Y  N  P  S  F  K  S  R  V  T  I  S  V  D  T  S  K  T 
                    Query_1145   91   TGGATTGGCTATGTCTACTACACTGGGGCCACCTACTACAACCCCTCGTTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGACG  180
V  85.7% (209/244)  IGHV4-59*08  139  ........G...A....T....G....AG....A.............CC...................A.....A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  T  L  N  L  S  S  V  T  A  A  D  A  A  V  Y  F  C  A  R  R  A  P  F  Y  Y  D  S  R 
                    Query_1145   181  CAGTTTACCCTGAACTTGAGTTCTGTCACCGCCGCAGACGCGGCCGTCTATTTCTGTGCCAGACGGGCCCCATTTTACTATGATAGTCGT  270
V  85.7% (209/244)  IGHV4-59*08  229  .....CT.......GC....C.....G............A.......G....A......G....--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.0% (19/20)    IGHD3-22*01  4    --------------------------------------------------------------------------.............A..  19

                                      GT------------------------>                                  
                                       G  F  H  H  D  V  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1145   271  GGTTTTCACCATGATGTCTTTGATCTGTGGGGCCAAGGGACATTGGTCACCGTCTCTTCAG  331
D  95.0% (19/20)    IGHD3-22*01  20   ....---------------------------------------------------------  23
J  90.0% (45/50)    IGHJ3*01     1    -----------.....CT......G.C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_216339

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           296     2e-82
IGHD3-10*01                                                                                           12.2    31   
IGHJ2*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGA	CGGGGA	TTGGAAG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGACGGGGATTGGAAGTTCGATCTC	ARHDGDWKFDL	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	220	31	0	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  I  S  S  R  F  F  W  G  W  L  R  Q  P  P  K  K  G 
                    Query_1146   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCATCAGTAGTCGTTTCTTCTGGGGCTGGCTCCGCCAGCCCCCAAAGAAGGGG  90
V  87.6% (220/251)  IGHV4-39*01  49   ...............................G........G.......A...A..A..........A..............GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  H  D  S  G  N  R  W  S  N  P  T  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_1146   91   CTGGAGTGGATTGGGACTATCCATGACAGTGGGAACAGATGGTCCAACCCGACCCTCAAGAGTCGACTCACCATATCGGTGGACACGTCC  180
V  87.6% (220/251)  IGHV4-39*01  139  ................G....T..T.T.......G..CC.AC.A.......T..............G..........C..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       M  N  Q  F  S  L  T  I  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  H  D  G  D  W  K  F 
                    Query_1146   181  ATGAACCAGTTCTCCCTGACGATTTCCTCTATGACCGCCGCTGACACGGCTGTCTATTACTGTGCGAGACATGACGGGGATTGGAAGTTC  270
V  87.6% (220/251)  IGHV4-39*01  229  .A.................A.C.GAG....G..........A...........G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01  15   --------------------------------------------------------------------------......----------  20
J  95.3% (41/43)    IGHJ2*01     11   ---------------------------------------------------------------------------------------...  13

                                      ----->                                  
                                       D  L  W  G  R  G  S  Q  V  T  V  S  S  
                    Query_1146   271  GATCTCTGGGGCCGTGGCTCCCAGGTCACTGTCTCCTCAG  310
J  95.3% (41/43)    IGHJ2*01     14   ..................A...T.................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_70287

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           369     2e-104
IGHD2-2*01                                                                                            12.2    37    
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAGCCACAATTAGTCCG	AGTAGT	TT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCCACAATTAGTCCGAGTAGTTTCTACTACGGTATGGACGTC	ARDLATISPSSFYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	263	27	0	90.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  T  V  S  C  K  S  S  G  Y  T  F  T  S  Y 
                    Query_1147   2    CAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGACGGTCTCCTGCAAGTCTTCTGGGTACACCTTTACCAGTTAC  91
V  90.7% (263/290)  IGHV1-18*04  7    ...................C.............................A.............G.......T..............C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  Y  Y  A  Q 
                    Query_1147   92   GGCATCACCTGGGTGCGGCAGGCCCCTGGACAGGGCCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACATACTATGCACAG  181
V  90.7% (263/290)  IGHV1-18*04  97   ..T....G.........A..............A..G.............................C......A.....A...........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  M  T  R  N  T  S  T  S  T  V  H  M  E  V  R  G  L  T  S  D  D  T  A 
                    Query_1147   182  ATGGTCCGCGACAGAGTCACCATGACCAGGAATACATCCACGAGCACAGTCCACATGGAGGTGAGGGGCCTGACATCTGACGACACGGCC  271
V  90.7% (263/290)  IGHV1-18*04  187  .A.C...AG.G.................CAG.C................C.T........C.....A......G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  I  S  P  S  S  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_1147   272  GTGTATTACTGTGCGAGAGATTTAGCCACAATTAGTCCGAGTAGTTTCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACC  361
V  90.7% (263/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD2-2*01   11   ---------------------------------------......---------------------------------------------  16
J  100.0% (52/52)   IGHJ6*02     11   -----------------------------------------------...........................................  53

                                               
                                       V  S  S 
                    Query_1147   362  GTCTCCTCA  370
J  100.0% (52/52)   IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_37204

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         391     6e-111
IGHD6-19*01                                                                                           18.0    0.65  
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTG	ATAGTACTGGCTGGT	TTCTGGTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGATAGTACTGGCTGGTTTCTGGTT	ARRDSTGWFLV	293	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	292	123	105	9	9	85.4
CDR3-IMGT (germline)	293	298	6	6	0	0	100
Total	N/A	N/A	298	276	13	9	92.6


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_1148     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTA  90
V  92.6% (276/298)  IGHV5-10-1*01  6    ......................................................................................G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  D  T  N  Y  S  P
                    Query_1148     91   CTGGATCAGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTGACACCAACTACAGCCC  180
V  92.6% (276/298)  IGHV5-10-1*01  96   .........C...............................................................T.T......--------  177
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N         

                                        ----------------------------------------------FR3-IMGT------------------------------------
                                          Y  S  P  S  L  Q  G  H  V  S  F  S  V  D  K  T  I  S  T  A  Y  L  Q  G  S  S  L  K  A  S
                    Query_1148     181  GTACAGCCCGTCCCTCCAGGGCCACGTCAGCTTCTCAGTCGACAAGACCATCAGCACTGCCTACCTGCAGGGGAGCAGCCTGAAGGCCTC  270
V  92.6% (276/298)  IGHV5-10-1*01  178  -............T....A..........C.A......CT......T.......................T...................  266
                                          Y  S  P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S

                                        ---------------------><-----------CDR3-IMGT----------->                                  
                                          D  T  A  I  Y  Y  C  A  R  R  D  S  T  G  W  F  L  V  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_1148     271  GGACACCGCCATTTATTACTGTGCGAGACGTGATAGTACTGGCTGGTTTCTGGTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  359
V  92.6% (276/298)  IGHV5-10-1*01  267  ............G...............-------------------------------------------------------------  294
                                          D  T  A  M  Y  Y  C  A  R                                                              
D  86.7% (13/15)    IGHD6-19*01    5    --------------------------------....C.G........------------------------------------------  19
J  97.1% (33/34)    IGHJ4*02       15   -------------------------------------------------------..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_70285

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           347     7e-98
IGHD1-26*01                                                                                           10.3    122  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	GGGAG	GACCGATCGTATTCT	TACAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGGAGGACCGATCGTATTCTTACAACGGTGTGGACGTC	ARDREDRSYSYNGVDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_1149   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATTACATGACTTGGATTCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-11*06  47   .................................................C.......GC.....C.........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  T  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1149   91   AGTGGATTTCATACATTAGTAGTACTAGTAGTTACACGAACTATGCAGATTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  94.4% (236/250)  IGHV3-11*06  137  .....G..................G............A.....C.....C...................................C....  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  K  A  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  E  D  R  S  Y  
                    Query_1149   181  AGAAGGCACTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATCGGGAGGACCGATCGTATT  270
V  94.4% (236/250)  IGHV3-11*06  227  ....CT..........G...................................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  9    ------------------------------------------------------------------------.....-------------  13

                                      T------------------>                                 
                                      S  Y  N  G  V  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1149   271  CTTACAACGGTGTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.1% (49/51)    IGHJ6*02     12   --...T.....A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_243740

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           416     2e-118
IGHD1-26*01                                                                                           10.3    133   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	289	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	281	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_1150   1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  90
V  94.9% (281/296)  IGHV1-18*01  1    .....T.................................................A..................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  F  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  F 
                    Query_1150   91   ACCTTTGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTTT  180
V  94.9% (281/296)  IGHV1-18*01  91   .G..A..G.................................................T......G.G...........A.......C.A.  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_1150   181  GCACAGGGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  270
V  94.9% (281/296)  IGHV1-18*01  181  ......AA..................................................................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------CDR3-IMGT----------->                                  
                                       T  A  I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_1150   271  ACGGCCATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  355
V  94.9% (281/296)  IGHV1-18*01  271  ......G.G.................-----------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_70283

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           338     4e-95
IGHD1-26*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	AC	AGTGGGAGC	ATT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTACAGAACAGTGGGAGCATTACTAC	TTEQWEHYY	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	24	6	0	80
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	236	20	0	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  N  D  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1151   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACTTTCAGTAACGACTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.2% (236/256)  IGHV3-15*01  47   .......T................C.......................C.........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  I  G  R  I  K  R  T  S  E  G  G  T  V  D  Y  A  A  P  V  T  G  R  F  T  I  S  R  D  
                    Query_1151   91   AGTGGATCGGCCGTATTAAAAGGACAAGTGAAGGTGGGACAGTAGACTACGCTGCACCCGTGACAGGCAGATTCACCATCTCAAGAGATG  180
V  92.2% (236/256)  IGHV3-15*01  137  .....G.T..............C.A..C...T.........AC....................A..........................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  N  S  I  L  Y  L  Q  M  N  S  L  K  I  E  D  T  A  V  Y  Y  C  T  T  E  Q  W  E  H  
                    Query_1151   181  ATTCAAATAGCATTCTGTACCTGCAAATGAACAGCCTGAAAATCGAGGACACAGCCGTGTATTACTGTACTACAGAACAGTGGGAGCATT  270
V  92.2% (236/256)  IGHV3-15*01  227  .......A.A..CG.....T......................C...........................C.....--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (9/9)     IGHD1-26*01  6    ------------------------------------------------------------------------------.........---  14

                                      ---->                                  
                                      Y  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1151   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (39/39)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_70282

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           304     1e-84
IGHD3-16*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	221	27	0	89.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_1152   4    CCCTGAGACTCTCCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  89.1% (221/248)  IGHV4-61*01  50   .....TCC...A..........C.................C....G.AG.T..........C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  S  S  L  K  S  R  M  S  M  S  V  D  T  S  
                    Query_1152   94   TGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACTCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCCA  183
V  89.1% (221/248)  IGHV4-61*01  140  ...A.........GT............G......CAC..A.......C.................G.CA....A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y  
                    Query_1152   184  AAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTATC  273
V  89.1% (221/248)  IGHV4-61*01  230  .G................A.................................G...............----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-16*02  24   ------------------------------------------------------------------------------------......  29

                                      ---------------->                                  
                                      R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_1152   274  GTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  324
D  100.0% (7/7)     IGHD3-16*02  30   .--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    -.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_243745

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*06                                                                                           332     3e-93
IGHD3-9*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*06	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGTTTCCCATGGCT	ACTGGTCATT	GACTCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGTTTCCCATGGCTACTGGTCATTGACTCTTTTGACTCC	AKDRFPWLLVIDSFDS	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  S  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1153   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCGGCAGTTATGGCATGAACTGGGTCCGCCAGGCTCCAGGCAAGGGGTTGG  90
V  92.4% (231/250)  IGHV3-33*06  47   .........................................A.T..C.........C.............................C...  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  A  D  G  T  K  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1153   91   AGTGGGTGGCACTTATTTGGGCTGATGGAACTAAGACATACTATGCAGAGTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.4% (231/250)  IGHV3-33*06  137  ...........G....A...TA........G...T.A............C........................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  I  V  Y  L  Q  M  D  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  R  F  P  W  L  L  
                    Query_1153   181  AGAACATTGTGTATCTGCAAATGGACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAAAGATCGTTTCCCATGGCTACTGG  270
V  92.4% (231/250)  IGHV3-33*06  227  ......CGC..............A................G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (9/10)     IGHD3-9*01   17   -------------------------------------------------------------------------------------.....  21

                                      T------------------>                                  
                                      V  I  D  S  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_1153   271  TCATTGACTCTTTTGACTCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  324
D  90.0% (9/10)     IGHD3-9*01   22   .T...-------------------------------------------------  26
J  95.3% (41/43)    IGHJ4*02     6    -----------.......A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_70280

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1154   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1154   91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_1154   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1154   271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_243749

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           279     3e-77
IGHD1-1*01                                                                                            10.3    115  
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGGGAAACGTAGGGATGCC	TACAA	TCGTC	GATGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGAAACGTAGGGATGCCTACAATCGTCGATGTTTTTGATGTC	ARMGNVGMPTIVDVFDV	220	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
CDR1-IMGT	14	33	20	18	2	0	90
FR2-IMGT	34	84	51	48	3	0	94.1
CDR2-IMGT	85	105	21	17	4	0	81
FR3-IMGT	106	219	114	106	8	0	93
CDR3-IMGT (germline)	220	225	6	6	0	0	100
Total	N/A	N/A	212	195	17	0	92


Alignments

                                      <-----CDR1-IMGT----><--------------------FR2-IMGT---------------------><-----CDR2-IMGT----
                                         W  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  L  E  W  I  G  Q  I  Y  H  T  G  G  
                    Query_1155   14   TCTGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATCGGGCAAATCTATCACACTGGGGGCA  103
V  92.0% (195/212)  IGHV4-31*02  86   ..A.C...........................................................T...T.C......T...G....A...  175
                                         S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  

                                      -><----------------------------------------------------FR3-IMGT---------------------------
                                      S  D  Y  S  P  S  L  K  S  R  L  T  I  A  V  D  T  S  K  N  Q  F  S  L  N  L  S  S  V  T  
                    Query_1155   104  GCGACTACAGCCCGTCCCTCAAGAGTCGACTTACCATAGCTGTAGACACGTCTAAGAACCAGTTCTCCCTGAACCTGAGTTCTGTGACGG  193
V  92.0% (195/212)  IGHV4-31*02  176  C.T......A...................G........T.A................................G.....C........T.  265
                                      T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  

                                      -------------------------><--------------------CDR3-IMGT-------------------->             
                                      A  A  D  T  A  V  Y  Y  C  A  R  M  G  N  V  G  M  P  T  I  V  D  V  F  D  V  W  G  Q  G  
                    Query_1155   194  CCGCGGACACGGCCGTGTATTACTGTGCGAGAATGGGAAACGTAGGGATGCCTACAATCGTCGATGTTTTTGATGTCTGGGGCCAAGGGA  283
V  92.0% (195/212)  IGHV4-31*02  266  ................................----------------------------------------------------------  297
                                      A  A  D  T  A  V  Y  Y  C  A  R                                                           
D  100.0% (5/5)     IGHD1-1*01   3    ----------------------------------------------------.....---------------------------------  7
J  98.0% (48/49)    IGHJ3*01     2    --------------------------------------------------------------....C.......................  29

                                                           
                                      T  M  V  T  V  S  S  
                    Query_1155   284  CAATGGTCACCGTCTCTTCAG  304
J  98.0% (48/49)    IGHJ3*01     30   .....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_243748

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            366     2e-103
IGHD3-3*01                                                                                            33.4    1e-05 
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGTAGTCAAGG	CGATTTTTGGAGTGGTT	TGTTCC	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTAGTCAAGGCGATTTTTGGAGTGGTTTGTTCCACTGCTATTATGGTATGGAAGTC	ARDGSQGDFWSGLFHCYYGMEV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  P  P  G  K  G  L  
                    Query_1156  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGGTATTGGATGAGTTGGGTCCGCCAACCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-7*03  47   ..............................................C...........C...........GG..................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_1156  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (242/250)  IGHV3-7*03  137  ........................................................A.................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><---------------------------
                                     K  N  S  V  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  Q  G  D  F  
                    Query_1156  181  AGAACTCAGTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAGAGATGGTAGTCAAGGCGATTTTT  270
V  96.8% (242/250)  IGHV3-7*03  227  ........C........C..................................G.................--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (17/17)   IGHD3-3*01  7    ----------------------------------------------------------------------------------........  14

                                     -CDR3-IMGT--------------------------->                                 
                                     W  S  G  L  F  H  C  Y  Y  G  M  E  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1156  271  GGAGTGGTTTGTTCCACTGCTATTATGGTATGGAAGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  100.0% (17/17)   IGHD3-3*01  15   .........--------------------------------------------------------------  23
J  92.9% (52/56)    IGHJ6*02    7    ---------------...A...C..C........C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_349564

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD3-22*01                                                                                           31.5    6e-05
IGHJ4*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTCCCAGGGTGACCTAC	TACTATGATAATACTGGTTATT	TTTCCCCATACCC	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTCCCAGGGTGACCTACTACTATGATAATACTGGTTATTTTTCCCCATACCCCTTCGACTAC	ARSPRVTYYYDNTGYFSPYPFDY	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  V  R  Q  S  P  G  K  G  L  Q 
                    Query_1157   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTATTACTGGAGCTGGGTCCGGCAGTCCCCAGGGAAGGGACTGCAG  90
V  91.4% (222/243)  IGHV4-59*01  49   ........................................G......C............A........C.................G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  V  Y  Y  L  G  T  T  N  Y  N  P  S  L  Q  N  R  V  T  I  S  V  D  T  S  E  N 
                    Query_1157   91   TGGGTTGGCTATGTCTATTACCTTGGGACCACCAACTACAACCCCTCCCTACAGAATCGAGTCACCATTTCAGTTGACACGTCCGAGAAC  180
V  91.4% (222/243)  IGHV4-59*01  139  ...A....G...A........AG.....G.....................CA...G............A.....A.........A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  F  S  L  N  L  A  A  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  R  V  T  Y  Y  Y  D 
                    Query_1157   181  CAGTTCTCCCTGAACCTGGCCGCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAAGTCCCAGGGTGACCTACTACTATGAT  270
V  91.4% (222/243)  IGHV4-59*01  229  ..............G...AG.T.........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.9% (20/22)    IGHD3-22*01  5    ---------------------------------------------------------------------------------.........  13

                                      3-IMGT----------------------------->                                  
                                       N  T  G  Y  F  S  P  Y  P  F  D  Y  W  G  H  G  I  L  V  T  V  S  S  
                    Query_1157   271  AATACTGGTTATTTTTCCCCATACCCCTTCGACTACTGGGGCCACGGAATCCTGGTCACCGTCTCCTCAG  340
D  90.9% (20/22)    IGHD3-22*01  14   .G..G........---------------------------------------------------------  26
J  93.2% (41/44)    IGHJ4*01     5    --------------------------...T..............A....C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_70289

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGA	GGTTCGGG	ACCTTACGCACGCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGAGGTTCGGGACCTTACGCACGCCACTACTCCGGTATGGACGTC	ARGGGSGPYARHYSGMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  V  F  Y  G  G  S  L  S  G  Y  Y  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_1158   1    ACCCTGTCCCTCACCTGCGTTTTTTATGGGGGGTCCCTCAGTGGTTATTACTGGAGCTGGATCCGCCAGACCCCAGGGAAGGGGCTGGAG  90
V  94.7% (232/245)  IGHV4-34*01  49   ...................C.G.C.....T......T..........C.....................C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  I  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S  K  R 
                    Query_1158   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCATCTACAATGCGTCCCTTAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAGG  180
V  94.7% (232/245)  IGHV4-34*01  139  ..................................A......CC.......C.....................................AC  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  S  G  P  Y  A  R 
                    Query_1158   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGGGAGGTTCGGGACCTTACGCACGC  270
V  94.7% (232/245)  IGHV4-34*01  229  .................................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (8/8)     IGHD3-10*01  11   ---------------------------------------------------------------------........-------------  18

                                      -------------------->                                 
                                       H  Y  S  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1158   271  CACTACTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  98.1% (52/53)    IGHJ6*02     10   -......A..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_70288

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           336     1e-94
IGHD7-27*01                                                                                           14.1    7.9  
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD7-27*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	CCG	CTGGGGA	N/A	ATCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACCCGCTGGGGAATC	TTRWGI	249	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	234	19	0	92.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  G  F  S  D  T  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1159   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCGGCTTCAGTGACACCTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.5% (234/253)  IGHV3-15*01  47   .......T.......................A...ACT......A..G...GG.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  V  R  T  K  T  E  G  G  T  T  D  Y  A  A  P  G  K  G  R  F  T  I  S  R  D  
                    Query_1159   91   AGTGGGTTGGCCGTGTTAGAACCAAAACTGAAGGCGGGACAACAGACTACGCTGCACCCGGCAAAGGCAGATTCACCATCTCAAGAGATG  180
V  92.5% (234/253)  IGHV3-15*01  137  ..............A...A..G.........T..T.........................TG............................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----CDR3-IMGT--->    
                                      D  S  E  S  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  R  W  G  I  W  
                    Query_1159   181  ATTCAGAAAGCACCCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACCCGCTGGGGAATCTGGG  270
V  92.5% (234/253)  IGHV3-15*01  227  .....A...A...G...........................................................-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (7/7)     IGHD7-27*01  5    ----------------------------------------------------------------------------.......-------  11
J  100.0% (37/37)   IGHJ3*02     14   -----------------------------------------------------------------------------------.......  20

                                                                    
                                      G  Q  G  T  M  V  T  V  S  S  
                    Query_1159   271  GCCAAGGGACAATGGTCACCGTCTCTTCAG  300
J  100.0% (37/37)   IGHJ3*02     21   ..............................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_180397

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            319     2e-89
IGHD5-12*01                                                                                           14.1    8.6  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CACAC	GTGGATA	AACCTAAGACTCCCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACACGTGGATAAACCTAAGACTCCCCTCTACTACGGCATGGACGTC	ATHVDKPKTPLYYGMDV	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  V  S  T  S  H  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_1160   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGTCCGTCAGCACTAGTCACTGGTGGAGTTGGGTGCGCCAGACCCCAGGAAAGGGGCTG  90
V  91.8% (224/244)  IGHV4-4*02   49   ................................C...A......G....A................C......C.......G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  F  Q  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  L  D  K  S  K 
                    Query_1160   91   GAGTGGATTGGGGAAATCTTTCAGAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCGTTAGACAAGTCCAAG  180
V  91.8% (224/244)  IGHV4-4*02   139  ...................A...T...............................................A..AG..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  H  V  S  L  R  V  N  A  A  T  A  A  D  T  A  V  Y  Y  C  A  T  H  V  D  K  P  K  T  P 
                    Query_1160   181  AACCACGTCTCCCTGAGGGTGAACGCTGCGACCGCCGCGGACACGGCCGTATATTACTGTGCGACACACGTGGATAAACCTAAGACTCCC  270
V  91.8% (224/244)  IGHV4-4*02   229  .....GT.........A.C...G.T...T.....................G.............--------------------------  292
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD5-12*01  1    ---------------------------------------------------------------------.......--------------  7

                                      -------------------->                                 
                                       L  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1160   271  CTCTACTACGGCATGGACGTCTGGGGCCAGGGGACCACAGTCACCGTCTCCTCA  324
J  94.2% (49/52)    IGHJ6*02     11   --.........T.................A........G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_171708

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            325     3e-91
IGHD6-13*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACCTGGTACTCGGGGTTTTGACTAC	ARHLGTPGTRGFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	22	2	3	81.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	246	229	14	3	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_1161   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  87
V  93.1% (229/246)  IGHV4-4*02   49   ...............................G.....T........GTA.......................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  S  Y  H  S  G  R  T  N  Y  N  A  S  F  Q  S  R  V  T  I  S  V  D  T  S  K 
                    Query_1161   88   GAGTGGATTGGGGAATCCTATCATAGTGGGCGCACCAACTACAACGCGTCCTTCCAGAGTCGAGTCACCATATCAGTAGACACGTCCAAG  177
V  93.1% (229/246)  IGHV4-4*02   139  ...............AT.............A..............C.....C..A...........................A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  P  G  T  R 
                    Query_1161   178  AATCAATTCTCCCTGAATCTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACCTGGTACTCGG  267
V  93.1% (229/246)  IGHV4-4*02   229  ..C..G...........G....G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1161   268  GGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (43/43)   IGHJ4*02     6    ---...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_171706

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           343     2e-96
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACCGCGAAAGTGG	GGAGTGGT	C	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACCGCGAAAGTGGGGAGTGGTCTTGATATC	ARDTAKVGSGLDI	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  A  V  S  S  S  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_1162   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCGCCGTCAGCAGCAGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  93.6% (235/251)  IGHV4-61*01  49   .................................T..........TG...G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_1162   91   CTGGAATGGATTGGGTATATCTACTACGGTGGAGACACCAAGTACAACCCCTCCCTCAAGAGTCGCGTCACCATATCATTAGACACGTCC  180
V  93.6% (235/251)  IGHV4-61*01  139  .....G.................T...A....GAG......C.......................A............G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  S  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  D  T  A  K  V  G  S 
                    Query_1162   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGGCCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATACCGCGAAAGTGGGGAGT  270
V  93.6% (235/251)  IGHV4-61*01  229  .................................A...................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-3*01   15   -------------------------------------------------------------------------------------.....  19

                                      ----------->                                  
                                       G  L  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_1162   271  GGTCTTGATATCTGGGGCCAAGGGACAATGGTCATCGTCTCTTCAG  316
D  100.0% (8/8)     IGHD3-3*01   20   ...-------------------------------------------  22
J  97.6% (41/42)    IGHJ3*02     9    ----..............................C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_171703

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD1-26*01                                                                                           12.2    31   
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARAKGIAVIVDAFDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_1163   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ..................A.....................G............................C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  V  S  V  D  M  S  N  N 
                    Query_1163   91   TGGATTGGATATATCTATTACAGAGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAGACATGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G..............T....G.....A......C.....CC................CA.A..........C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  K  G  I  A  V  I  V  D 
                    Query_1163   181  CGGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGTGCGAGAGCTAAGGGTATCGCTGTTATAGTAGAT  270
V  90.6% (221/244)  IGHV4-59*01  229  .A...........AG.................T.......CG.....G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------------......----  8
J  91.8% (45/49)    IGHJ3*01     2    ---------------------------------------------------------------------------------------...  4

                                      ----------->                                  
                                       A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_1163   271  GCTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  316
J  91.8% (45/49)    IGHJ3*01     5    .........G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_171702

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD5-18*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1164   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  97.9% (238/243)  IGHV4-59*01  49   ...............................................C......................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1164   91   TGGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  .........T................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_1164   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTAC  270
V  97.9% (238/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (18/20)    IGHD5-18*01  1    ----------------------------------------------------------------..........C.....T...------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1164   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_171701

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           321     7e-90
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACCTTGACTAC	GGGKNLLGSYYLDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	246	1	1	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_1165   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  92.2% (224/243)  IGHV4-39*01  50   .....TCC...A....C.............G.....T.....G.....G.........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_1165   94   TGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCCA  183
V  92.2% (224/243)  IGHV4-39*01  140  ..........................A....G.G.........CA..........C.................A................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S  
                    Query_1165   184  AGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGTT  273
V  92.2% (224/243)  IGHV4-39*01  230  ...................G....G...........................G..........---------------------------  292
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                             
D  100.0% (6/6)     IGHD3-16*01  18   -----------------------------------------------------------------......-------------------  23

                                      ------------->                                  
                                      Y  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1165   274  ACTACCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.9% (47/48)    IGHJ4*02     1    .....T..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_171700

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           386     1e-109
IGHD3-22*01                                                                                           21.8    0.045 
IGHJ6*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGAG	GTAGCGGTTATTAC	GC	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGAGGTAGCGGTTATTACGCCGTC	ARGGGSGYYAV	289	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	74	1	0	98.7
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	19	5	0	79.2
FR3-IMGT	175	288	114	101	13	0	88.6
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	271	24	0	91.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_1166   1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACT  90
V  91.9% (271/295)  IGHV1-18*01  1    .....T...................................................................................C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  T  H  N  G  K  T  T  Y 
                    Query_1166   91   AACTATGGCATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCGGCACTCACAATGGTAAGACGACATAT  180
V  91.9% (271/295)  IGHV1-18*01  91   .G......T....G..........................................A......A..G..T..........C..A.AC...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  K  D  R  V  T  M  T  T  D  T  S  T  S  T  V  H  L  E  L  R  S  L  R  S  D  D 
                    Query_1166   181  GCACAGAAGTTCAAGGACAGAGTCACCATGACCACAGACACATCAACCAGCACAGTCCACCTGGAGCTGAGGAGCCTGAGATCCGACGAC  270
V  91.9% (271/295)  IGHV1-18*01  181  .........C..C...G...........................C..G.......C.T..A......................T......  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------CDR3-IMGT----------->                                 
                                       T  A  F  Y  Y  C  A  R  G  G  G  S  G  Y  Y  A  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1166   271  ACGGCCTTTTATTACTGTGCGAGAGGAGGAGGTAGCGGTTATTACGCCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  354
V  91.9% (271/295)  IGHV1-18*01  271  ......G.G................-----------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                             
D  92.9% (13/14)    IGHD3-22*01  15   -------------------------------....T.........---------------------------------------  28
J  100.0% (37/37)   IGHJ6*02     26   -----------------------------------------------.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_129221

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           304     9e-85
IGHD3-9*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	AGCATATACCTAT	TATTTTGATTGG	N/A	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGAAGCATATACCTATTATTTTGATTGG	AKEAYTYYFDW	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  H  F  G  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_1167   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGTCCCAGGCAAGGGCCTGG  90
V  88.8% (222/250)  IGHV3-30*18  47   ...................................A........AG..A.......................CT...........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  H  D  E  A  I  I  Y  Y  G  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_1167   91   AGTGGGTGGCAGTTATTTCACATGATGAAGCTATCATATACTATGGCGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  88.8% (222/250)  IGHV3-30*18  137  ................A...T......G.AG..AT.A........CA..........A................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  I  L  Y  L  Q  M  N  G  L  R  T  E  G  T  A  M  Y  Y  C  A  K  E  A  Y  T  Y  Y  F  
                    Query_1167   181  AGAACATCTTGTATCTGCAGATGAATGGCCTGAGAACTGAGGGCACGGCTATGTATTACTGTGCGAAGGAAGCATATACCTATTATTTTG  270
V  88.8% (222/250)  IGHV3-30*18  227  ......CGC..........A.....CA........G......A.......G................A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  91.7% (11/12)    IGHD3-9*01   10   -----------------------------------------------------------------------------------.......  16

                                      ---->                                  
                                      D  W  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_1167   271  ATTGGTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  309
D  91.7% (11/12)    IGHD3-9*01   17   .C...----------------------------------  21
J  97.1% (33/34)    IGHJ4*02     15   -----................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_275112

Length=316
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           307     1e-85
IGHD4-17*01                                                                                           16.1    2.0  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCG	ACGGTGAC	ACCGAGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACGGTGACACCGAGAATGACTAC	AADGDTENDY	230	259	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	232	3	3	0	0	100
Total	N/A	N/A	220	208	12	0	94.5


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  L  T  F  S  S  F  G  M  H  W  V  R  Q  P  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_1168   13   GTCTGGACTCACCTTCAGTAGCTTTGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  94.5% (208/220)  IGHV3-33*01  72   .......T...............A......................G...........................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  K  K  Y  Y  T  D  S  V  K  G  R  F  I  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_1168   103  TGGAAGTAAGAAATACTATACAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCAAGAACACGTTGTATCTGCAGATGAA  192
V  94.5% (208/220)  IGHV3-33*01  162  .........T.........G........................C............................C..........A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------CDR3-IMGT--------->                       
                                        S  L  R  V  D  D  T  A  V  Y  F  C  A  A  D  G  D  T  E  N  D  Y  W  G  Q  G  T  L  V  T
                    Query_1168   193  CAGCCTGAGAGTCGACGACACGGCTGTCTATTTCTGTGCGGCCGACGGTGACACCGAGAATGACTACTGGGGCCAGGGAACCCTGGTCAC  282
V  94.5% (208/220)  IGHV3-33*01  252  ...........C...G...........G....A.......--------------------------------------------------  291
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                   
D  100.0% (8/8)     IGHD4-17*01  6    --------------------------------------------........--------------------------------------  13
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------------------------..............................  37

                                                 
                                        V  S  S  
                    Query_1168   283  CGTCTCCTCAG  293
J  100.0% (41/41)   IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30515799


Query= Query_275111

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_1169   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG....T..............A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1169   91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.4% (228/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_1169   181  CAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  ...............C...G...........................G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_1169   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_129222

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            380     1e-107
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              110     2e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGG	GTATAGCAGCTCG	ATCGTTA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTATAGCAGCTCGATCGTTATACTACTACTACGGTATGGACGTC	ARGGIAARSLYYYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	246	3	0	98.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  R  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1170  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTAGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (246/249)  IGHV3-7*01  47   .............................G............................................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  N  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1170  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACAATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.8% (246/249)  IGHV3-7*01  137  .........................................T................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  G  I  A  A  R  S  
                    Query_1170  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGGGTATAGCAGCTCGATCGT  270
V  98.8% (246/249)  IGHV3-7*01  227  ....................................C................................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD6-6*01  3    ------------------------------------------------------------------------.............-----  15

                                     IMGT--------------------->                                 
                                     L  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1170  271  TATACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  100.0% (57/57)   IGHJ6*02    6    --.........................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_275117

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_1171   1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  87.0% (214/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_1171   91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCACCATCTCAGTAGACAAGTCCAAG  180
V  87.0% (214/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A................A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_1171   181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  87.0% (214/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_1171   271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_129224

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           347     7e-98
IGHD3-3*01                                                                                            10.3    122  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTCTTC	TTTTT	CTCCAAGAGAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTCTTCTTTTTCTCCAAGAGAGAGTCTACTACTTTGACTAC	ARSLLFLQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  K  S  G  G  Y  Y  W  S  W  V  R  Q  H  P  G  K  G 
                    Query_1172   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAAGAGTGGTGGCTACTACTGGAGCTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (235/248)  IGHV4-31*03  49   ..................................C.....GC........T...............A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  A  T  S 
                    Query_1172   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGCCACGTCT  180
V  94.8% (235/248)  IGHV4-31*03  139  ..................................G.............C......................C........A.A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  S  L  L  F  L  Q  E 
                    Query_1172   181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACTGTCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTCTTCTTTTTCTCCAAGAG  270
V  94.8% (235/248)  IGHV4-31*03  229  .....................C....C..........C..............................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD3-3*01   10   ----------------------------------------------------------------------------.....---------  14

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1172   271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_275115

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-28*01                                                                                           347     7e-98
IGHD1-26*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-28*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAA	TTGCATCGGTCGCGC	GTGGGAG	T	TACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGCATCGGTCGCGCGTGGGAGTTACGTTGACTAC	ARIASVARGSYVDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	56	27	26	1	0	96.3
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	246	234	12	0	95.1


Alignments

                                      <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                         L  R  L  S  C  A  A  S  G  Y  S  I  S  S  N  N  W  W  G  W  I  R  Q  P  P  G  K  G  L  
                    Query_1173   4    CCCTGAGACTCTCCTGTGCTGCCTCTGGTTACTCCATCAGCAGTAATAACTGGTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGG  93
V  95.1% (234/246)  IGHV4-28*01  50   .....TCC...A....C....T.......................G............................................  139
                                         L  S  L  T  C  A  V  S  G  Y  S  I  S  S  S  N  W  W  G  W  I  R  Q  P  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  I  G  S  I  S  Y  T  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  
                    Query_1173   94   AGTGGATTGGGTCCATCTCTTATACTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGA  183
V  95.1% (234/246)  IGHV4-28*01  140  ............A.....A.....G.................................................................  229
                                      E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  Q  F  S  L  K  L  R  S  V  T  A  V  D  T  A  V  Y  F  C  A  R  I  A  S  V  A  R  G  S  
                    Query_1173   184  ACCAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGTGGACACGGCCGTGTATTTCTGTGCGAGAATTGCATCGGTCGCGCGTGGGAGTT  273
V  95.1% (234/246)  IGHV4-28*01  230  ......................C...............................A...........------------------------  295
                                      N  Q  F  S  L  K  L  S  S  V  T  A  V  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD1-26*01  7    ---------------------------------------------------------------------------------.......--  13
J  97.8% (45/46)    IGHJ4*02     3    -----------------------------------------------------------------------------------------.  3

                                      ---------->                                  
                                      Y  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1173   274  ACGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.8% (45/46)    IGHJ4*02     4    ..T..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_129226

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           363     1e-102
IGHD3-22*01                                                                                           27.6    8e-04 
IGHJ2*01                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CATATTT	TGATGGTAGTGGTTATT	TCGCCAACG	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACATATTTTGATGGTAGTGGTTATTTCGCCAACGGGTACGTCGATCTC	ATYFDGSGYFANGYVDL	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1174   1    GGTCCCTGAGACTCTCCTGTGAAGCGTCTGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (239/246)  IGHV3-33*01  47   .....................C.......................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  D  H  G  N  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1174   91   AGTGGGTGGCACTTATATGGGATCATGGAAATAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  97.2% (239/246)  IGHV3-33*01  137  ...........G........T..G......G...........................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  Y  F  D  G  S  G  Y  
                    Query_1174   181  AGAACACGCTCTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGACATATTTTGATGGTAGTGGTTATT  270
V  97.2% (239/246)  IGHV3-33*01  227  ..........G.......................................................------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.1% (16/17)    IGHD3-22*01  10   -------------------------------------------------------------------------....A............  26

                                      GT-------------------->                                  
                                      F  A  N  G  Y  V  D  L  G  G  R  G  P  L  V  P  V  S  S  
                    Query_1174   271  TCGCCAACGGGTACGTCGATCTCGGGGGCCGGGGCCCCCTGGTCCCTGTCTCCTCAG  327
J  89.6% (43/48)    IGHJ2*01     6    ---------.....T........T.......T...A........A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_129229

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         357     1e-100
IGHD3-3*01                                                                                            21.8    0.041 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGTGTCG	GGAGTGGTTCTTAT	CCGACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCAGGTGTCGGGAGTGGTTCTTATCCGACCTGACTAT	VRDQVSGVVLIRPDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1175     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTCACTATGCAATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-30-3*01  47   ............................................AG......T.....................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  A  I  S  Y  D  G  S  N  R  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1175     91   AGTGGGTGGCAGCTATATCATATGATGGAAGCAATAGATACTACGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.6% (239/250)  IGHV3-30-3*01  137  ............T.......................A........C............................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        K  N  T  L  Y  V  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  V  R  D  Q  V  S  G  V  V  
                    Query_1175     181  AGAACACGCTGTATGTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTATTTACTACTGTGTGAGAGATCAGGTGTCGGGAGTGGTTC  270
V  95.6% (239/250)  IGHV3-30-3*01  227  ..............C...................................G.G..T.......C......--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.9% (13/14)    IGHD3-3*01     15   --------------------------------------------------------------------------------.........A  24

                                        ---------------->                                  
                                        L  I  R  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1175     271  TTATCCGACCTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  92.9% (13/14)    IGHD3-3*01     25   ....-----------------------------------------------  28
J  97.6% (40/41)    IGHJ4*02       8    ----------......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_129228

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           335     4e-94
IGHD2-15*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	ACCCGTTTTGTCT	TGGCGGTAGATGC	ATCTCGGGCTTGAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACCCGTTTTGTCTTGGCGGTAGATGCATCTCGGGCTTGAGTGACTTC	ARDPFCLGGRCISGLSDF	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  P  F  S  G  H  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_1176   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGCCCTTCAGTGGTCACTACTGGAACTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  93.9% (229/244)  IGHV4-34*01  49   .........................A.......T...........T.........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  R  G  G  S  T  T  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_1176   91   TGGATTGGGGAAATCAATCGTGGTGGAAGCACCACCTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCTGTAGACACGTCCAAGAAC  180
V  93.9% (229/244)  IGHV4-34*01  139  ...................A.A............A.................................A..A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  F  C  L  G  G  R  C 
                    Query_1176   181  CAATTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGCGAGACCCGTTTTGTCTTGGCGGTAGATGC  270
V  93.9% (229/244)  IGHV4-34*01  229  ..G...........G....G...........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (11/13)    IGHD2-15*01  13   -----------------------------------------------------------------------------...T.....C...  25

                                      -------------------->                                  
                                       I  S  G  L  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1176   271  ATCTCGGGCTTGAGTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.6% (40/41)    IGHJ4*02     8    --------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_275119

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         374     8e-106
IGHD3-22*01                                                                                           48.8    3e-10 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	AC	TTACTATGATAGTAGTGGTTATTAC	CTTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACTTACTATGATAGTAGTGGTTATTACCTTAACTACTTTGACCAC	ARTYYDSSGYYLNYFDH	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	244	5	0	98


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  R  V  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_1177     1    ACCCTGTCCCTCACCTGCGCTGTCTCTCGTGTCTCCATCAGAAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  98.0% (244/249)  IGHV4-30-4*01  49   ..................A........G...G.........C.......A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1177     91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  98.0% (244/249)  IGHV4-30-4*01  139  ..........................................................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  Y  Y  D  S  S  G 
                    Query_1177     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAACTTACTATGATAGTAGTGGT  270
V  98.0% (244/249)  IGHV4-30-4*01  229  .....................................................................---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (25/25)   IGHD3-22*01    4    -----------------------------------------------------------------------...................  22

                                        MGT-------------------->                                  
                                         Y  Y  L  N  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1177     271  TATTACCTTAACTACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  100.0% (25/25)   IGHD3-22*01    23   ......----------------------------------------------------  28
J  97.9% (47/48)    IGHJ4*02       1    ----------...........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_275118

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           343     2e-96
IGHD3-9*01                                                                                            43.0    2e-08
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACCTC	GTATTACGATATTTTGACTGATTAT	AAAAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACCTCGTATTACGATATTTTGACTGATTATAAAACCTACTACTATTACGGAATGGACGTC	ARDTSYYDILTDYKTYYYYGMDV	242	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	28	28	0	0	100
CDR1-IMGT	29	52	24	24	0	0	100
FR2-IMGT	53	103	51	49	2	0	96.1
CDR2-IMGT	104	127	24	18	6	0	75
FR3-IMGT	128	241	114	108	6	0	94.7
CDR3-IMGT (germline)	242	249	8	7	1	0	87.5
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E
                    Query_1178   1    GTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGA  90
V  94.0% (234/249)  IGHV3-23*01  48   .........................................................C................................  137
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E

                                      ------------><-------CDR2-IMGT------><----------------------------------------------------
                                        W  V  S  G  I  N  G  G  G  S  K  T  Y  Y  A  E  S  A  K  G  R  F  T  I  S  R  D  N  S  K
                    Query_1178   91   GTGGGTCTCAGGTATAAATGGTGGTGGTAGTAAGACATATTACGCAGAGTCCGCGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAA  180
V  94.0% (234/249)  IGHV3-23*01  138  ...........C...T.G....A.....G...GC.....C........C....T....................................  227
                                        W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K

                                      FR3-IMGT----------------------------------------------------><----------------------------
                                        N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  R  D  T  S  Y  Y  D  I  L
                    Query_1178   181  GAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCCTATATTATTGTGCGAGAGATACCTCGTATTACGATATTTT  270
V  94.0% (234/249)  IGHV3-23*01  228  ...................................C.............G.......C.......A...---------------------  296
                                        N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                        
D  96.0% (24/25)    IGHD3-9*01   1    ---------------------------------------------------------------------------...............  15

                                      -CDR3-IMGT----------------------------->                                 
                                        T  D  Y  K  T  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1178   271  GACTGATTATAAAACCTACTACTATTACGGAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  343
D  96.0% (24/25)    IGHD3-9*01   16   .....G....---------------------------------------------------------------  25
J  96.6% (56/58)    IGHJ6*02     5    ---------------.........C.....T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_74078

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           310     1e-86
IGHD3-3*01                                                                                            10.3    120  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGACACAG	TTTTT	AGTTTCCAC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACACAGTTTTTAGTTTCCACTTCGACCCC	ARVDTVFSFHFDP	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  F  F  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_1179   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGCGGTAGTTTCTTTTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  89.6% (224/250)  IGHV4-61*01  49   .........................................C..T.......A..AC....G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  A  Y  I  S  Y  S  G  R  T  K  S  N  P  S  L  K  S  R  V  T  M  S  I  D  T  S 
                    Query_1179   91   CTGGAATGGCTTGCCTATATCTCTTACAGTGGGAGAACCAAGTCTAATCCCTCTCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCC  180
V  89.6% (224/250)  IGHV4-61*01  139  .....G...A...GG.......A............C.....C.AC..C.....C....................A...G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  V  D  T  V  F  S  F 
                    Query_1179   181  AAGAACCAATTCTCCCTGAGGCTGACTTCCGTGACCGCTGCGGACACGGCCGTTTATTTCTGTGCGAGAGTGGACACAGTTTTTAGTTTC  270
V  89.6% (224/250)  IGHV4-61*01  229  ........G..........A.....GC..T.......................G....A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-3*01   10   -------------------------------------------------------------------------------.....------  14

                                      ----------->                                  
                                       H  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1179   271  CACTTCGACCCCTGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ5*02     9    ---.......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_74079

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           310     1e-86
IGHD2-15*01                                                                                           10.3    121  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGGAGA	GTAGC	GGGGGCTTCAAT	GGTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGGAGAGTAGCGGGGGCTTCAATGGTTTGGACGTC	AREKESSGGFNGLDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  R  S  H  G  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_1180   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGGTTCAGAAGTCATGGCATGTATTGGGTCCGCCAGGCACCAGGCAAGGGGCTGG  90
V  89.6% (224/250)  IGHV3-33*01  47   ....................................CC.....T..CT........C.C..............T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  F  D  G  S  T  K  Y  Y  G  D  A  V  Q  G  R  F  T  I  S  R  D  N  F  
                    Query_1180   91   AGTGGGTGGCAGTTATATGGTTTGATGGAAGTACGAAATACTATGGAGACGCCGTGCAGGGCCGATTCACGATTTCAAGAGACAATTTCA  180
V  89.6% (224/250)  IGHV3-33*01  137  .....................A...........AT..........C....T.....A.............C..C..C..........C..  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  M  V  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  E  K  E  S  S  G  G  
                    Query_1180   181  AGAACATGGTGTACCTGCAAATGAATAGCCTGAGAGTCGAGGACACGGCCGTGTATTATTGCGCGAGAGAGAAGGAGAGTAGCGGGGGCT  270
V  89.6% (224/250)  IGHV3-33*01  227  ......C.C....T...........C..........C............T........C..T........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-15*01  18   ------------------------------------------------------------------------------.....-------  22

                                      ---------------->                                 
                                      F  N  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1180   271  TCAATGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  320
J  95.6% (43/45)    IGHJ6*02     18   -----...A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_337709

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           400     9e-114
IGHD3-9*01                                                                                            14.1    9.0   
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-9*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCTACG	TTTTGGCTGG	GAGAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTACGTTTTGGCTGGGAGAATGATGCACTTGATATC	ARHLRFGWENDALDI	267	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	29	1	0	96.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	152	21	21	0	0	100
FR3-IMGT	153	266	114	107	7	0	93.9
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	265	9	0	96.7


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  
                    Query_1181   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAGTAGTTACTACTGGGGCTGGA  90
V  96.7% (265/274)  IGHV4-39*01  26   ................T...............................................C.........................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  D  N  P  S  L  K  S  R  
                    Query_1181   91   TCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACGACAACCCGTCCCTCAAGAGTCGAG  180
V  96.7% (265/274)  IGHV4-39*01  116  .................................................................T........................  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  R  L  S  S  V  T  D  A  D  T  A  V  Y  Y  C  A  
                    Query_1181   181  TCACCATCTCCGTTGACACGTCCAAGAATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGACGCAGACACGGCTGTGTATTATTGTGCGA  270
V  96.7% (265/274)  IGHV4-39*01  206  .......A.....A..............C.............A.................C.....................C.......  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      --------------CDR3-IMGT----------------->                                  
                                      R  H  L  R  F  G  W  E  N  D  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1181   271  GACATCTACGTTTTGGCTGGGAGAATGATGCACTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  345
V  96.7% (265/274)  IGHV4-39*01  296  ....-----------------------------------------------------------------------  299
                                      R                                                                          
D  90.0% (9/10)     IGHD3-9*01   12   ----------.....A....-------------------------------------------------------  21
J  96.0% (48/50)    IGHJ3*02     1    -------------------------......TT..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_337708

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           327     8e-92
IGHD6-19*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	AATCC	ATATCAGTGGCTGGT	GTGGAG	GACCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GAATCCATATCAGTGGCTGGTGTGGAGGACCCC	ESISVAGVEDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1182   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTCAGTTCCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGC  90
V  93.0% (226/243)  IGHV3-30*03  47   ........................C...................AG.....G.....................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  L  I  S  Y  D  G  S  N  M  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1182   91   AATGGGTGGCACTTATATCATATGATGGAAGTAATATGCACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.0% (226/243)  IGHV3-30*03  137  .G.........G........................AAT...................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  S  T  V  Y  L  Q  M  N  S  L  R  S  E  D  T  A  V  Y  Y  C  E  S  I  S  V  A  G  V  E  
                    Query_1182   181  AGAGCACAGTTTATCTCCAAATGAACAGCCTGAGAAGTGAGGACACGGCTGTGTATTACTGTGAATCCATATCAGTGGCTGGTGTGGAGG  270
V  93.0% (226/243)  IGHV3-30*03  227  ...A...GC.G.....G..................GC..........................---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  93.3% (14/15)    IGHD6-19*01  5    --------------------------------------------------------------------...G...........-------  19
J  97.5% (39/40)    IGHJ5*02     12   -----------------------------------------------------------------------------------------.  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1182   271  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCATCAG  309
J  97.5% (39/40)    IGHJ5*02     13   ..................................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_340329

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           396     2e-112
IGHD2-15*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGC	ATATTGTAGTGATAGTAACTGCTAC	CCGAGGGAGCG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGCATATTGTAGTGATAGTAACTGCTACCCGAGGGAGCGCTACTTTGACCAC	ARLAYCSDSNCYPRERYFDH	289	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	69	5	0	93.2
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	273	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  A  G  E  S  L  R  I  S  C  K  V  S  G  Y  K  F  A  
                    Query_1183   2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGGCGGGGGAGTCTCTGAGGATCTCCTGTAAGGTGTCTGGATACAAGTTTGCCA  91
V  93.2% (273/293)  IGHV5-51*03  2    ..G...................................C...............A..............GT..........GC...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  M  Y  P  S  D  S  D  A  R  Y  
                    Query_1183   92   CCTATTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATGTATCCTAGTGACTCTGATGCCAGATACA  181
V  93.2% (273/293)  IGHV5-51*03  92   G...C...................................................A....C......G...........A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  G  L  E  A  S  D  
                    Query_1183   182  GCCCGTCCTTTGAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGTGGCCTGGAGGCCTCGGACA  271
V  93.2% (273/293)  IGHV5-51*03  182  ..........CC................C.........................................CA.....A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------------CDR3-IMGT------------------------>             
                                      T  A  M  Y  Y  C  A  R  L  A  Y  C  S  D  S  N  C  Y  P  R  E  R  Y  F  D  H  W  G  Q  G  
                    Query_1183   272  CCGCCATGTATTACTGTGCGAGACTGGCATATTGTAGTGATAGTAACTGCTACCCGAGGGAGCGCTACTTTGACCACTGGGGCCAGGGAA  361
V  93.2% (273/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  88.0% (22/25)    IGHD2-15*01  4    ----------------------------...........G.G...G.......-------------------------------------  28
J  95.7% (45/47)    IGHJ4*02     2    ----------------------------------------------------------------..........T...............  27

                                                           
                                      T  L  V  T  V  S  S  
                    Query_1183   362  CCCTGGTCACCGTCTCGTCAG  382
J  95.7% (45/47)    IGHJ4*02     28   ................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_340328

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           363     2e-102
IGHD3-10*02                                                                                           10.3    141   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGGCCCTCAGCGACGGCCACAATT	TGTTC	AAA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATGGGGCCCTCAGCGACGGCCACAATTTGTTCAAATACTACGGTATGGACGTC	VRDGALSDGHNLFKYYGMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	261	29	0	90


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  N  F  T  N  F 
                    Query_1184   2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTCAGGCTTCTGGTTACAATTTTACCAATTTT  91
V  90.0% (261/290)  IGHV1-18*01  7    ...................C.......................................CA...............CC.......GC.A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  V  D  N  G  N  T  K  Y  A  Q 
                    Query_1184   92   GGTATCAGCTGGGTGCGGCAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCGGCGTTGATAATGGTAATACAAAATATGCACAG  181
V  90.0% (261/290)  IGHV1-18*01  97   .................A.......................................A...C.T.C........C.....C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       I  L  Q  G  R  V  T  L  T  T  D  T  S  T  R  K  T  Y  M  Q  L  R  S  L  R  S  D  D  T  A 
                    Query_1184   182  ATTCTCCAGGGCAGAGTCACCTTGACCACAGACACATCTACGAGAAAAACCTATATGCAACTGAGGAGTCTGAGATCTGACGACACGGCC  271
V  90.0% (261/290)  IGHV1-18*01  187  .AG..................A................C.....C.C.G....C...G.G........C.....................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------CDR3-IMGT------------------------>                  
                                       V  Y  Y  C  V  R  D  G  A  L  S  D  G  H  N  L  F  K  Y  Y  G  M  D  V  W  G  Q  G  T  T 
                    Query_1184   272  GTCTATTATTGTGTGAGAGATGGGGCCCTCAGCGACGGCCACAATTTGTTCAAATACTACGGTATGGACGTCTGGGGCCAAGGGACTACG  361
V  90.0% (261/290)  IGHV1-18*01  277  ..G.....C....C......----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (5/5)     IGHD3-10*02  10   ----------------------------------------------.....---------------------------------------  14
J  98.0% (50/51)    IGHJ6*02     12   ------------------------------------------------------................................C...  47

                                                     
                                       V  T  V  S  S 
                    Query_1184   362  GTCACCGTCTCCTCA  376
J  98.0% (50/51)    IGHJ6*02     48   ...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_340327

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           305     3e-85
IGHD1-26*01                                                                                           18.0    0.58 
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGATACAACGAAA	TATACTGGGACCTAC	GATGGG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGATACAACGAAATATACTGGGACCTACGATGGGTTCGATCTC	ARDDTTKYTGTYDGFDL	235	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	120	21	15	3	3	71.4
FR3-IMGT	121	234	114	105	9	0	92.1
CDR3-IMGT (germline)	235	242	8	8	0	0	100
Total	N/A	N/A	245	222	20	3	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  L  S  G  V  S  I  S  G  Y  Y  W  H  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1185   1    ACCCTGTCCCTCACCTGCTCTCTCTCTGGTGTCTCCATCAGTGGTTACTACTGGCACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (222/245)  IGHV4-59*01  49   ..................A..G.........G..........A...........AG..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N     S  G  G  T  K  Y  S  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1185   91   TGGATCGGCTATATCAAT---AGCGGGGGCACCAAGTACAGTCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  177
V  90.6% (222/245)  IGHV4-59*01  139  .....T..G......T..TAC..T...A.......C....AC..........A.....................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  F  Y  Y  C  A  R  D  D  T  T  K  Y  T  G  T 
                    Query_1185   178  CAGTTCTCCCTGAAACTGACCTCTGTGACTGCTGCGGACACGGCCTTTTATTACTGTGCGAGAGACGATACAACGAAATATACTGGGACC  267
V  90.6% (222/245)  IGHV4-59*01  229  ..............G....G.........C...............G.G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  86.7% (13/15)    IGHD1-26*01  3    ------------------------------------------------------------------------------....G.....G.  14

                                      ----------------->                                  
                                       Y  D  G  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_1185   268  TACGATGGGTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  319
D  86.7% (13/15)    IGHD1-26*01  15   ...-------------------------------------------------  17
J  100.0% (43/43)   IGHJ2*01     11   ---------...........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_337702

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           336     1e-94
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	AGTGGC	TACTATGACACTAGTGGT	GACATTCC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGTGGCTACTATGACACTAGTGGTGACATTCCCAACTGGTTCGACCCC	SGYYDTSGDIPNWFDP	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  R  R  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_1186   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCCGCCGTAATTACTATTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  94.2% (229/243)  IGHV4-61*01  49   ..........................................A.TG...G......C.....C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_1186   91   CTGGAGTGGATTGGATATATCTATTACCGTGGGACCACCAACTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCC  180
V  94.2% (229/243)  IGHV4-61*01  139  ..............G............A......G............C..............................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  T  Y  Y  C  S  G  Y  Y  D  T  S  G  D 
                    Query_1186   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCACTTATTACTGTAGTGGCTACTATGACACTAGTGGTGAC  270
V  94.2% (229/243)  IGHV4-61*01  229  ...................................................GTG.........---------------------------  291
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  88.9% (16/18)    IGHD3-22*01  5    ---------------------------------------------------------------------........T.G.......---  22

                                      GT------------------>                                  
                                       I  P  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1186   271  ATTCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (50/50)   IGHJ5*02     2    -----..................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_337701

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           434     4e-124
IGHD6-13*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTATCGT	TATGGCAGCAGGTGGT	TACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTATCGTTATGGCAGCAGGTGGTTACCACTTTGACTTC	ARLIVMAAGGYHFDF	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	284	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  T  Y
                    Query_1187   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCACCTA  90
V  97.9% (284/290)  IGHV5-51*01  6    .............................................................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  F  D  T  R  Y  S  P
                    Query_1187   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTTTGATACCAGATATAGCCC  180
V  97.9% (284/290)  IGHV5-51*01  96   .......................................................................C............C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1187   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (284/290)  IGHV5-51*01  186  .....................................................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  A  R  L  I  V  M  A  A  G  G  Y  H  F  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1187   271  CATCTATTACTGTGCGAGACTTATCGTTATGGCAGCAGGTGGTTACCACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  97.9% (284/290)  IGHV5-51*01  276  ...G................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  87.5% (14/16)    IGHD6-13*01  4    ---------------------------...A.......C....-----------------------------------------------  19
J  97.8% (44/45)    IGHJ4*02     4    -----------------------------------------------.........A.................................  46

                                        
                                        
                    Query_1187   361  AG  362
J  97.8% (44/45)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_340324

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           333     1e-93
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAA	TACGGTTTTTGGAGTGGTTA	ACCA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCAATACGGTTTTTGGAGTGGTTAACCATGACTAC	ASNTVFGVVNHDY	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	227	14	0	94.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  Y  S  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_1188   4    CCCTGAGACTCTCCTGTGCTGTCTATGGTGGGTCCTACAGTGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  94.2% (227/241)  IGHV4-34*01  50   .....TCC...A....C...................T.....G...............................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  Y  G  R  T  N  F  N  P  S  L  E  S  R  V  T  I  L  V  D  T  T  K  N  
                    Query_1188   94   GGATTGGGGAAATCAATCATTATGGAAGAACCAACTTCAACCCGTCCCTCGAGAGTCGAGTCACCATATTAGTAGACACGACCAAGAACC  183
V  94.2% (227/241)  IGHV4-34*01  140  ....................AG......C.......A.............A..................C..........T.........  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  N  T  V  F  G  V  V  N  H  
                    Query_1188   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGCAATACGGTTTTTGGAGTGGTTAACCATG  273
V  94.2% (227/241)  IGHV4-34*01  230  .............................................................-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  95.0% (19/20)    IGHD3-3*01   5    ----------------------------------------------------------------....A...............------  24
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1188   274  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (41/41)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_340323

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_1189   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.9% (279/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_1189   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_1189   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  .......C.....................................C...........G......A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_1189   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.9% (279/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_1189   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_340322

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           304     1e-84
IGHD1-26*01                                                                                           12.2    36   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTCTGGATCTCT	TGGGAG	GCGACAC	TGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCTGGATCTCTTGGGAGGCGACACTGACGAC	ATLDLLGGDTDD	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	69	6	0	92
CDR1-IMGT	76	99	24	17	7	0	70.8
FR2-IMGT	100	150	51	43	8	0	84.3
CDR2-IMGT	151	174	24	16	8	0	66.7
FR3-IMGT	175	288	114	94	20	0	82.5
CDR3-IMGT (germline)	289	292	4	4	0	0	100
Total	N/A	N/A	292	243	49	0	83.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  A  G  S  T  V  K  V  S  C  K  T  S  R  A  T  F  S 
                    Query_1190   1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGGCTGGGTCCACGGTGAAGGTCTCCTGCAAGACTTCCAGGGCCACCTTCAGC  90
V  83.2% (243/292)  IGHV1-69*06  1    ...G...................G...............C........T....................G....TG.A.G..........  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  N  T  F  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  A  I  I  P  T  L  R  T  T  N  Y 
                    Query_1190   91   AGCAACACCTTCACTTGGGTGCGCCAGGCCCCGGGACAAGGGCTTGAGTGGATGGGGGCCATCATCCCCACCCTGCGCACGACAAACTAC  180
V  83.2% (243/292)  IGHV1-69*06  91   ...T.TG.TA...GC........A........T.......................A.GG........T.T.T.TG.T..AG........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  R  F  Q  G  R  V  T  I  T  A  D  R  S  S  S  T  S  Y  M  G  L  S  G  L  T  P  E  D 
                    Query_1190   181  GCACAGAGGTTCCAAGGCAGAGTCACCATAACCGCGGACAGGTCTTCGAGTACAAGTTATATGGGACTGAGCGGTCTGACTCCTGAGGAC  270
V  83.2% (243/292)  IGHV1-69*06  181  .......A......G...........G..T..........AA..CA....C...GCC..C....AG......A.C....GAT........  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  V  Y  Y  C  A  T  L  D  L  L  G  G  D  T  D  D  W  G  P  G  T  L  V  T  V  S  S  
                    Query_1190   271  ACGGCCGTGTATTACTGTGCGACTCTGGATCTCTTGGGAGGCGACACTGACGACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  358
V  83.2% (243/292)  IGHV1-69*06  271  ......................------------------------------------------------------------------  292
                                       T  A  V  Y  Y  C  A                                                                    
D  100.0% (6/6)     IGHD1-26*01  8    ----------------------------------......------------------------------------------------  13
J  95.1% (39/41)    IGHJ4*02     8    -----------------------------------------------....T.........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_340321

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           419     2e-119
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	69	2	0	97.2
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	292	280	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  
                    Query_1191   5    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACT  94
V  95.9% (280/292)  IGHV5-51*01  5    ..............................A...................................G....................G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  
                    Query_1191   95   ACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCC  184
V  95.9% (280/292)  IGHV5-51*01  95   .........G...........................C....................C...................C...........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  
                    Query_1191   185  CGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCG  274
V  95.9% (280/292)  IGHV5-51*01  185  ........C.....................................C...........G......A........................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------------CDR3-IMGT----------------------->                   
                                      A  I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  
                    Query_1191   275  CCATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGG  364
V  95.9% (280/292)  IGHV5-51*01  275  ....G.................--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  92.9% (13/14)    IGHD1-26*01  4    ------------------------------..........C...----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    -----------------------------------------------.......A...................................  48

                                                    
                                      V  T  V  S  S 
                    Query_1191   365  TCACCGTCTCCTCA  378
J  98.2% (56/57)    IGHJ6*02     49   ..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_340320

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           335     4e-94
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCATAGGGGTG	ATTACGATTTTTGGAGGGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCATAGGGGTGATTACGATTTTTGGAGGGGTTATTGACTACTTCGACTAC	ARSIGVITIFGGVIDYFDY	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	228	14	0	94.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_1192   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  94.2% (228/242)  IGHV4-59*08  50   .....TCC...A..............................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  V  Y  Y  S  G  S  T  K  Y  N  P  S  L  Q  S  R  V  T  I  S  L  G  T  S  K  N  
                    Query_1192   94   GGATTGGTTATGTGTATTACAGTGGGAGCACCAAGTATAACCCCTCGCTCCAGAGTCGAGTCACCATATCACTAGGCACCTCCAAGAACC  183
V  94.2% (228/242)  IGHV4-59*08  140  .......G...A.C....................C..C........C...A....................G...A...G..........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  I  G  V  I  T  I  F  G  
                    Query_1192   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGATCCATAGGGGTGATTACGATTTTTGGAG  273
V  94.2% (228/242)  IGHV4-59*08  230  ..............................................................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  95.8% (23/24)    IGHD3-3*01   3    --------------------------------------------------------------------------................  18

                                      ---------------------->                                  
                                      G  V  I  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1192   274  GGGTTATTGACTACTTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  95.8% (23/24)    IGHD3-3*01   19   T.......-------------------------------------------------  26
J  97.9% (47/48)    IGHJ4*02     1    ---------.......T........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_348138

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           21.8    0.041
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCGTAAAGGG	GGTTATTACTA	T	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCGTAAAGGGGGTTATTACTATCTACTACTACTACAATATGGACGTC	ARTVKGVITIYYYYNMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1193   1    ACCCTGTCCCTCACCTGCGCCGTCTATGGTGGGCCTTTCAGTGGTTACTACTGGACTTGGATCCGCCAACCCCCAGGGAAGGGGCTGGAG  90
V  94.7% (230/243)  IGHV4-34*01  49   ....................T............T.C...................GC...........G.....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  L  S  G  R  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_1193   91   TGGATTGGCGAAATCAATCTTAGTGGAAGAACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAT  180
V  94.7% (230/243)  IGHV4-34*01  139  ........G..........A.........C..........................................G................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  I  Y 
                    Query_1193   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAACCGTAAAGGGGGTTATTACTATCTAC  270
V  94.7% (230/243)  IGHV4-34*01  229  .............A.................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (11/11)   IGHD3-22*01  20   --------------------------------------------------------------------------...........-----  30
J  96.6% (56/58)    IGHJ6*02     5    --------------------------------------------------------------------------------------....  8

                                      -------------------->                                 
                                       Y  Y  Y  N  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1193   271  TACTACTACAATATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  96.6% (56/58)    IGHJ6*02     9    .........GG...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_348139

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            29.5    2e-04
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTTGCGG	CGATTTTTGGAGTGG	CCGAAGGG	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTTGCGGCGATTTTTGGAGTGGCCGAAGGGTGGCTCGACCCC	AKDVAAIFGVAEGWLDP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1194   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAATTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-23*01  47   ...........................................C.GC...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  S  G  G  S  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1194   91   AGTGGGTCTCAGTTATTAGTGGTAGTGGTGGTAGCACAAATTACGCAGACTCAGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (236/250)  IGHV3-23*01  137  ............C.........................T.C...........C.....................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  K  V  Y  L  Q  M  N  S  L  R  A  E  D  T  G  V  Y  Y  C  A  K  D  V  A  A  I  F  G  
                    Query_1194   181  AGAACAAAGTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGGCGTTTATTACTGTGCGAAAGATGTTGCGGCGATTTTTGGAG  270
V  94.4% (236/250)  IGHV3-23*01  227  ......CGC...............................G.......C...A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD3-3*01   7    ------------------------------------------------------------------------------............  18

                                      GT-------------------->                                  
                                      V  A  E  G  W  L  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_1194   271  TGGCCGAAGGGTGGCTCGACCCCTGGGGCCAGGGAACCCTGGTCATTGTCTCCTCAG  327
D  100.0% (15/15)   IGHD3-3*01   19   ...------------------------------------------------------  21
J  93.5% (43/46)    IGHJ5*02     6    -----------...T..............................CC..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_38029

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*03                                                                                           319     2e-89
IGHD4-4*01                                                                                            18.0    0.56 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*03	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	ACTTA	TGACTACAG	GGGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTTATGACTACAGGGGGGGTTTTGACTAC	ATYDYRGGFDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	222	18	0	92.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  H  Y  Y  W  S  W  I  R  Q  T  P  G  E  G  L  E 
                    Query_1195   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTCATTACTACTGGAGCTGGATCCGGCAGACCCCAGGGGAGGGACTGGAG  90
V  92.5% (222/240)  IGHV4-59*03  49   .......................................A..AG.........................C........A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  H  N  G  Y  T  T  Y  N  P  S  L  E  S  R  V  T  N  S  V  D  T  S  K  K 
                    Query_1195   91   TGGATTGGCTATATCTATCACAACGGGTACACCACCTACAACCCCTCCCTCGAGAGTCGAGTCACCAATTCAGTAGACACGTCCAAGAAG  180
V  92.5% (222/240)  IGHV4-59*03  139  ........G.........T...GT...AG.....A................A...............TA....................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  Y  D  Y  R  G  G  F  D  Y 
                    Query_1195   181  CAATTCTCCCTGAAGTTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGACTTATGACTACAGGGGGGGTTTTGACTAC  270
V  92.5% (222/240)  IGHV4-59*03  229  ...............C....C.......................................------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD4-4*01   1    -----------------------------------------------------------------.........----------------  9
J  97.7% (42/43)    IGHJ4*02     6    ---------------------------------------------------------------------------------.........  14

                                                                        
                                       W  G  Q  G  T  L  V  S  V  S  S  
                    Query_1195   271  TGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  304
J  97.7% (42/43)    IGHJ4*02     15   .....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_38028

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           304     1e-84
IGHD5-18*01                                                                                           18.0    0.60 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	245	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	34	20	19	1	0	95
CDR1-IMGT	35	58	24	19	5	0	79.2
FR2-IMGT	59	109	51	49	2	0	96.1
CDR2-IMGT	110	130	21	17	4	0	81
FR3-IMGT	131	244	114	104	10	0	91.2
CDR3-IMGT (germline)	245	252	8	8	0	0	100
Total	N/A	N/A	238	216	22	0	90.8


Alignments

                                      <-----FR1-IMGT-----><-------CDR1-IMGT------><--------------------FR2-IMGT-----------------
                                         L  T  C  T  A  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  W  I  
                    Query_1196   15   CCCTCACCTGCACTGCCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGTGGATTG  104
V  90.8% (216/238)  IGHV4-59*01  56   ...............T........G........G.AG..A......................C...........................  145
                                         L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  

                                      ----><-----CDR2-IMGT-----><----------------------------------------------------FR3-IMGT---
                                      G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  V  S  V  D  T  S  K  S  Q  I  
                    Query_1196   105  GATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCGTTTCAGTAGACACGTCCAAGAGCCAGATCT  194
V  90.8% (216/238)  IGHV4-59*01  146  .G......T..........G.GC.............................A.T....A.A...................A....T...  235
                                      G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  

                                      -------------------------------------------------><----------------------CDR3-IMGT--------
                                      S  L  S  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F  G  S  
                    Query_1196   195  CCCTGAGCCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTA  284
V  90.8% (216/238)  IGHV4-59*01  236  ......AG........................A.......G.................--------------------------------  293
                                      S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                                   
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------------------.......C.G..A.....---  18
J  98.0% (48/49)    IGHJ5*02     3    -----------------------------------------------------------------------------------------.  3

                                      ------------->                                  
                                      N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_1196   285  ACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  332
J  98.0% (48/49)    IGHJ5*02     4    ..........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_348132

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           396     2e-112
IGHD3-3*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GG	TTACGATTTTTGGAGTGGTT	TCAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTTACGATTTTTGGAGTGGTTTCAGACTTTGACTAC	ARVTIFGVVSDFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	270	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T  Y  H 
                    Query_1197   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTACCTACCAC  91
V  94.1% (270/287)  IGHV1-18*04  7    ............................................................................C.......AG.T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  T  S  A  T  D  G  N  T  H  Y  A  H 
                    Query_1197   92   GGTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGACCAGCGCTACCGATGGGAACACACACTATGCACAC  181
V  94.1% (270/287)  IGHV1-18*04  97   .......G...............................................T.......TA.A....T......A..........G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  V  Q  G  R  V  T  L  T  T  D  S  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_1197   182  AACGTCCAGGGCAGAGTCACCTTGACCACAGACTCATCCACGAGCACCGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.1% (270/287)  IGHV1-18*04  187  ..GC.................A...........A.............A..........................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  V  T  I  F  G  V  V  S  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1197   272  GTGTATTACTGTGCGAGGGTTACGATTTTTGGAGTGGTTTCAGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  94.1% (270/287)  IGHV1-18*04  277  .................-----------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                          
D  100.0% (20/20)   IGHD3-3*01   4    -------------------....................-------------------------------------------------  23
J  100.0% (45/45)   IGHJ4*02     4    -------------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_38026

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD1-26*01                                                                                           12.2    37    
IGHJ6*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCCCGGCAGG	GTGGGA	TCTTCTTG	ACGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCCCGGCAGGGTGGGATCTTCTTGACGCTATGGTCGTC	ARHGPAGWDLLDAMVV	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	98	16	0	86
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	270	25	0	91.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  N  F  N  
                    Query_1198   3    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGTTCTGGATACAACTTTAACA  92
V  91.5% (270/295)  IGHV5-51*01  2    ....G...................................C.............A..........................G.....C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  N  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_1198   93   GTAACTGGATCGGATGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACCAGATATA  182
V  91.5% (270/295)  IGHV5-51*01  92   .CT..........C..................................................T.......................C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  P  S  F  Q  G  H  V  T  I  T  A  D  K  S  T  T  T  A  Y  L  R  G  S  T  L  K  A  P  A  
                    Query_1198   183  GGCCGTCCTTCCAAGGCCACGTCACCATTACAGCCGACAAGTCCACCACCACCGCCTACCTGCGGGGGAGCACCCTAAAGGCCCCGGCCG  272
V  91.5% (270/295)  IGHV5-51*01  182  .C.................G........CT...............T..G..............A.T......G...G......T...A.A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      A  A  T  Y  Y  C  A  R  H  G  P  A  G  W  D  L  L  D  A  M  V  V  W  G  Q  G  P  T  V  P  
                    Query_1198   273  CCGCCACTTATTACTGTGCGAGACATGGCCCGGCAGGGTGGGATCTTCTTGACGCTATGGTCGTCTGGGGCCAAGGGCCCACGGTCCCCT  362
V  91.5% (270/295)  IGHV5-51*01  272  ......TG.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD1-26*01  7    -------------------------------------......-----------------------------------------------  12
J  89.4% (42/47)    IGHJ6*02     16   ---------------------------------------------------...G.....A................A........A..G  54

                                              
                                      F  S  S 
                    Query_1198   363  TCTCCTCA  370
J  89.4% (42/47)    IGHJ6*02     55   ........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_348130

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTG	TACAGTTATGGTT	TCCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGTACAGTTATGGTTTCCAATACTACTTTGACTCC	ARLYSYGFQYYFDS	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  I  Y  D  Y  F  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_1199   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTATTTATGATTACTTCTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  92.0% (229/249)  IGHV4-39*01  49   ......................................C..C.G.AG.AG.....A.....G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  V  Y  Y  A  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1199   91   CTGGAGTGGATTGGGAGTGTCTATTATGCTGGGAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCCGTAGACACGTCC  180
V  92.0% (229/249)  IGHV4-39*01  139  ..................A........AG.....G.................................C.....................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       E  N  Q  F  S  L  K  M  R  S  A  T  A  A  D  T  A  V  Y  F  C  A  R  L  Y  S  Y  G  F  Q 
                    Query_1199   181  GAGAACCAGTTCTCCCTGAAAATGAGGTCTGCGACCGCCGCAGACACGGCTGTGTATTTCTGTGCGAGATTGTACAGTTATGGTTTCCAA  270
V  92.0% (229/249)  IGHV4-39*01  229  A...................GC....C....T..........................A..........---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD5-18*01  6    ------------------------------------------------------------------------.....C.......-----  18

                                      -------------->                                  
                                       Y  Y  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_1199   271  TACTACTTTGACTCCTGGGGCCAGGGAGCCCTAGTCACCGTCTCCTCAG  319
J  93.8% (45/48)    IGHJ4*02     1    -............A.............A....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_348137

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           291     5e-81
IGHD2-8*01                                                                                            12.2    32   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCAGTTTGCGCA	TGTATG	GCTATCTTGCCAG	TGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCAGTTTGCGCATGTATGGCTATCTTGCCAGTGACCAG	AKDRSLRMYGYLASDQ	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	96	18	0	84.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  S  Y  T  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1200   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCTTTCAGTTCCTATACCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  87.2% (218/250)  IGHV3-21*01  47   ...................................A.C......AG.....G.....A...............................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  A  I  S  S  S  G  R  S  I  Y  M  S  D  S  V  R  G  R  F  A  I  S  R  D  N  A  
                    Query_1200   91   AGTGGGTCTCAGCCATTAGTAGTAGCGGTCGTTCCATCTATATGTCAGACTCAGTGAGGGGCCGATTCGCCATCTCCAGAGACAACGCCA  180
V  87.2% (218/250)  IGHV3-21*01  137  ...........T.............TA..A...A...A..CTACG............A..........A.....................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  K  S  L  R  V  E  D  T  G  V  Y  F  C  A  K  D  R  S  L  R  M  Y  
                    Query_1200   181  AGAACACTCTCTATCTGCAAATGAAAAGCCTGAGAGTTGAAGACACGGGTGTTTATTTTTGTGCGAAAGATCGCAGTTTGCGCATGTATG  270
V  87.2% (218/250)  IGHV3-21*01  227  .....T.A..G..............C..........CC..G.......C...G....AC.......G...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-8*01   19   ------------------------------------------------------------------------------------......  24

                                      T------------------>                                  
                                      G  Y  L  A  S  D  Q  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_1200   271  GCTATCTTGCCAGTGACCAGTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  324
J  92.7% (38/41)    IGHJ4*02     8    -------------....T.C............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_38021

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           394     7e-112
IGHD6-13*01                                                                                           21.8    0.045 
IGHJ4*01                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAGTG	GCAGCAGCTGG	CT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGCAGCAGCTGGCTACTACTTTGACTCC	ARGVAAAGYYFDS	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	270	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  I  K  K  P  G  E  S  L  K  I  S  C  R  G  S  G  Y  R  F  T  N  F
                    Query_1201   1    GCAGCTGGTGCAGTCTGGAGCAGAAATAAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGGGTTCTGGATACAGGTTTACCAACTT  90
V  93.8% (270/288)  IGHV5-51*03  6    ........................GG.G..................................A...............C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  M  I  Y  P  R  D  S  E  T  R  Y  S  P
                    Query_1201   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATGATCTATCCTCGTGACTCTGAGACCAGATACAGCCC  180
V  93.8% (270/288)  IGHV5-51*03  96   ...................................................G..C.........G..........T..............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  N  S  M  N  T  A  H  L  Q  W  S  S  L  R  A  S  D  T  A
                    Query_1201   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAACTCCATGAACACCGCCCACCTGCAGTGGAGCAGTCTGAGGGCCTCGGACACCGC  270
V  93.8% (270/288)  IGHV5-51*03  186  ....................................G.....C.G.......T................C....A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                 
                                        I  Y  Y  C  A  R  G  V  A  A  A  G  Y  Y  F  D  S  W  G  Q  G  T  L  V  S  V  S  S 
                    Query_1201   271  CATTTATTACTGTGCGAGGGGAGTGGCAGCAGCTGGCTACTACTTTGACTCCTGGGGCCAAGGTACCCTGGTCTCCGTCTCCTCA  355
V  93.8% (270/288)  IGHV5-51*03  276  ...G..............-------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                      
D  100.0% (11/11)   IGHD6-13*01  8    -------------------------...........-------------------------------------------------  18
J  93.6% (44/47)    IGHJ4*01     1    --------------------------------------............A............A.........A...........  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_38020

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           332     4e-93
IGHD3-22*01                                                                                           21.8    0.043
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TGCCCGCGACGATGAAAAGTATTACTCCTT	TAGTAGTGGTT	TTTCACCATTTAGCT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGCCCGCGACGATGAAAAGTATTACTCCTTTAGTAGTGGTTTTTCACCATTTAGCTCC	ASARDDEKYYSFSSGFSPFSS	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  F  W  N  W  I  R  Q  R  P  G  K  G 
                    Query_1202   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTGGTGATTACTTCTGGAACTGGATCCGCCAACGCCCAGGGAAGGGC  90
V  92.7% (230/248)  IGHV4-31*03  49   .........................................C.......G.....A.....G............G.A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  Y  M  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  T 
                    Query_1202   91   CTGGAGTGGATTGCGTATATGTATTACAGTGGGAGCACCTACTACAATCCGTCCCTGAAGAGTCGAGTTACCATCTCAATAGACACGACT  180
V  92.7% (230/248)  IGHV4-31*03  139  .............G...C..C..........................C........C.................A...G........T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  H  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  A  R  D  D  E  K  Y 
                    Query_1202   181  AAGAACCACTTCTCCCTGAGGCTGAACTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGTGCCCGCGACGATGAAAAGTAT  270
V  92.7% (230/248)  IGHV4-31*03  229  ........G..........A.....G...........................G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      CDR3-IMGT-------------------------->                                  
                                       Y  S  F  S  S  G  F  S  P  F  S  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1202   271  TACTCCTTTAGTAGTGGTTTTTCACCATTTAGCTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  100.0% (11/11)   IGHD3-22*01  13   --------...........---------------------------------------------------  23
J  100.0% (36/36)   IGHJ5*02     16   ----------------------------------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_145199

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           324     7e-91
IGHD3-16*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	GTGGAGC	TTGGGGG	GCCTAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTGGAGCTTGGGGGGCCTACGACTAC	GGAWGAYDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  A  M  A  W  L  R  Q  A  P  G  K  G  L  
                    Query_1203   1    GGTCTCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCACCTATGCCATGGCCTGGCTCCGCCAGGCTCCAGGGAAGGGGCTAC  90
V  92.6% (225/243)  IGHV3-23*01  47   ....C.....................................G..G..........AG....G.........................GG  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  D  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1203   91   AATGGGTCTCATCTATTAGTGATAGTGGAGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.6% (225/243)  IGHV3-23*01  137  .G.........G.........G......T.............................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      N  N  T  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  G  G  A  W  G  A  Y  D  Y  
                    Query_1203   181  ACAACACACTGTCTCTGCAAATGAATAGCCTGAGAGCCGAAGACACGGCCGTATATTATTGTGGTGGAGCTTGGGGGGCCTACGACTACT  270
V  92.6% (225/243)  IGHV3-23*01  227  .G.....G....A............C..............G.................C....---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (7/7)     IGHD3-16*01  16   ----------------------------------------------------------------------.......-------------  22
J  100.0% (38/38)   IGHJ4*02     9    -----------------------------------------------------------------------------------.......  15

                                                                     
                                      W  G  Q  G  T  L  V  T  V  S  S
                    Query_1203   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTC  301
J  100.0% (38/38)   IGHJ4*02     16   ...............................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_145198

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           388     5e-110
IGHD2-2*01                                                                                            10.3    134   
IGHJ3*01                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTGAAGTCTTT	TACCA	CCGAG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATGTC	ASLKSFTTEDAFDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	268	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  V  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  T  S
                    Query_1204   1    GCAGCTGGTGCAGTCTGGAGCAGTGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATTCGACTTTACCACCTC  90
V  93.1% (268/288)  IGHV5-51*01  6    .......................A..................................................A.AG........G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  Q  W  M  G  V  I  Y  P  D  D  S  D  T  I  Y  S  P
                    Query_1204   91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGCAATGGATGGGAGTCATCTATCCTGATGACTCTGATACCATATATAGTCC  180
V  93.1% (268/288)  IGHV5-51*01  96   C.......................................G.G........GA............G..............G...C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  A  K  S  I  N  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_1204   181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGCCAAGTCCATCAACACTGCCTACCTGCAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.1% (268/288)  IGHV5-51*01  186  ........A.......................A...........G...C...............A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  S  L  K  S  F  T  T  E  D  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1204   271  CATGTATTACTGTGCGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  359
V  93.1% (268/288)  IGHV5-51*01  276  ..................-----------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                          
D  100.0% (5/5)     IGHD2-2*01   16   ------------------------------.....------------------------------------------------------  20
J  100.0% (49/49)   IGHJ3*01     2    ----------------------------------------.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_196489

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           382     4e-108
IGHD3-22*01                                                                                           18.0    0.68  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGGTCGGCTCGGGAGCCC	GTAGTGGTT	GCTTCTATATTGCG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGGTCGGCTCGGGAGCCCGTAGTGGTTGCTTCTATATTGCGGACTCC	ARGVGSGARSGCFYIADS	291	344	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	70	4	0	94.6
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	104	10	0	91.2
CDR3-IMGT (germline)	291	295	5	5	0	0	100
Total	N/A	N/A	292	268	24	0	91.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  S  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  
                    Query_1205   4    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTTAAAAAGTCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGTTTCAGCG  93
V  91.8% (268/292)  IGHV5-51*03  2    ....G..........................G......C...............................T...........C..T.C.A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  G  W  V  R  Q  M  S  G  K  G  L  E  W  M  G  I  I  Y  P  R  D  S  E  I  T  Y  
                    Query_1205   94   ACTACTGGATCGGCTGGGTGCGCCAAATGTCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTCGTGACTCTGAAATCACCTATA  183
V  91.8% (268/292)  IGHV5-51*03  92   G........................G...C......................................G..........T.C..GA..C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  R  G  H  V  T  I  S  V  D  K  S  I  S  T  A  F  L  Q  W  T  S  L  E  A  S  D  
                    Query_1205   184  GCCCGTCCTTCCGAGGCCACGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTTCCTACAGTGGACCAGCCTGGAGGCCTCGGACA  273
V  91.8% (268/292)  IGHV5-51*03  182  ............A......G.............C.......................A...G.......G.......A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------------CDR3-IMGT--------------------->                   
                                      T  A  M  Y  Y  C  A  R  G  V  G  S  G  A  R  S  G  C  F  Y  I  A  D  S  W  G  Q  G  T  L  
                    Query_1205   274  CCGCCATGTATTACTGTGCGAGGGGGGTCGGCTCGGGAGCCCGTAGTGGTTGCTTCTATATTGCGGACTCCTGGGGCCAGGGAACCCTGG  363
V  91.8% (268/292)  IGHV5-51*03  272  ......................--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (9/9)     IGHD3-22*01  15   ------------------------------------------.........---------------------------------------  23
J  97.5% (39/40)    IGHJ4*02     9    -----------------------------------------------------------------....A....................  33

                                                     
                                      V  T  V  S  S  
                    Query_1205   364  TCACCGTCTCCTCAG  378
J  97.5% (39/40)    IGHJ4*02     34   ...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_196488

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           311     4e-87
IGHD4-4*01                                                                                            19.9    0.15 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATCAGC	CAGTAACTAC	TCTCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCAGCCAGTAACTACTCTCGGCTAC	ARNQPVTTLGY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  T  V  S  N  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1206   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGGTCACCGTCAGTAACAACTATATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.6% (222/245)  IGHV3-53*01  47   ................................T............G......C....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  L  S  V  M  Y  S  R  G  A  T  R  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  S  S  K  
                    Query_1206   91   AGTGGCTCTCAGTCATGTATAGTCGTGGAGCCACAAGGTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  90.6% (222/245)  IGHV3-53*01  137  .....G.......T..T.....CG....TAG....TAC................A..........................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      N  T  V  Y  L  Q  M  K  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  N  Q  P  V  T  T  L  G  
                    Query_1206   181  ACACGGTGTATCTTCAAATGAAAAACCTGAGAGTCGAGGACACGGCCGTCTATTACTGTGCGAGAAATCAGCCAGTAACTACTCTCGGCT  270
V  90.6% (222/245)  IGHV3-53*01  227  .....C................C.G........C...............G...............-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (10/10)   IGHD4-4*01   7    ------------------------------------------------------------------------..........--------  16
J  97.4% (37/38)    IGHJ4*02     11   ----------------------------------------------------------------------------------------..  12

                                      ->                                  
                                      Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_1206   271  ACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.4% (37/38)    IGHJ4*02     13   .........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_145191

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           343     2e-96
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACCGCGAAAGTGG	GGAGTGGT	C	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACCGCGAAAGTGGGGAGTGGTCTTGATATC	ARDTAKVGSGLDI	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  A  V  S  S  S  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_1207   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCGCCGTCAGCAGCAGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  93.6% (235/251)  IGHV4-61*01  49   .................................T..........TG...G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_1207   91   CTGGAATGGATTGGGTATATCTACTACGGTGGAGACACCAAGTACAACCCCTCCCTCAAGAGTCGCGTCACCATATCATTAGACACGTCC  180
V  93.6% (235/251)  IGHV4-61*01  139  .....G.................T...A....GAG......C.......................A............G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  S  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  D  T  A  K  V  G  S 
                    Query_1207   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGGCCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATACCGCGAAAGTGGGGAGT  270
V  93.6% (235/251)  IGHV4-61*01  229  .................................A...................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-3*01   15   -------------------------------------------------------------------------------------.....  19

                                      ----------->                                  
                                       G  L  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_1207   271  GGTCTTGATATCTGGGGCCAAGGGACAATGGTCATCGTCTCTTCAG  316
D  100.0% (8/8)     IGHD3-3*01   20   ...-------------------------------------------  22
J  97.6% (41/42)    IGHJ3*02     9    ----..............................C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_196486

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            380     9e-108
IGHD1-1*01                                                                                            10.3    114   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	TACAA	TA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTACAATAACTTTGACTAC	ARGYNNFDY	241	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	113	1	0	99.1
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	245	2	0	99.2


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_1208  1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  99.2% (245/247)  IGHV4-4*01  49   .......................C..................................................................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_1208  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  99.2% (245/247)  IGHV4-4*01  139  ..........................................................................................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->   
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  N  N  F  D  Y  G 
                    Query_1208  181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTACAATAACTTTGACTACGGG  270
V  99.2% (245/247)  IGHV4-4*01  229  .......................................................G...........-----------------------  295
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (5/5)     IGHD1-1*01  3    ---------------------------------------------------------------------.....----------------  7
J  93.3% (42/45)    IGHJ4*02    4    ----------------------------------------------------------------------------...........T..  17

                                                                    
                                      G  Q  G  P  L  I  T  V  S  S  
                    Query_1208  271  GGCCAGGGACCCCTGATCACCGTCTCCTCAG  301
J  93.3% (42/45)    IGHJ4*02    18   .........A.....G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_196485

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD3-16*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_1209   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (227/249)  IGHV4-61*01  49   .......................C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S 
                    Query_1209   91   CTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  91.2% (227/249)  IGHV4-61*01  139  ....A.........GT............G......CAC..A.........................G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y 
                    Query_1209   181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTAT  270
V  91.2% (227/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------------.....  28

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_1209   271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
D  100.0% (7/7)     IGHD3-16*02  29   ..--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_145192

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     6e-103
IGHD2-2*02                                                                                            16.1    2.6   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCAAGCAGTCGAGATTGTCCCAGTAACGC	CTGCTATA	AGGAATCAGATCTTTACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCAAGCAGTCGAGATTGTCCCAGTAACGCCTGCTATAAGGAATCAGATCTTTACCCCTACTACGGTATGGACCTC	ASSSRDCPSNACYKESDLYPYYGMDL	261	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	51	0	0	100
CDR2-IMGT	126	146	21	20	1	0	95.2
FR3-IMGT	147	260	114	107	7	0	93.9
CDR3-IMGT (germline)	261	263	3	3	0	0	100
Total	N/A	N/A	263	248	15	0	94.3


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  A  L  S  C  T  V  S  G  G  S  I  R  R  H  Y  W  S  W  I  R  
                    Query_1210   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGGCCCTCAGTTGCACTGTCTCTGGTGGCTCCATCAGGAGGCACTACTGGAGCTGGATCCGGC  90
V  94.3% (248/263)  IGHV4-59*01  26   ................T............T......CC..........................T..TT.....................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  E  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_1210   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGAGAGCACCAATTACAACCCCTCCCTCAAGAGTCGCGTCACCA  180
V  94.3% (248/263)  IGHV4-59*01  116  ................................................G.........C.......................A.......  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  A  D  T  S  K  N  Q  V  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  S  
                    Query_1210   181  TATCAGCAGACACGTCCAAGAATCAGGTCTCCCTGAAACTAAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGTCAAGCA  270
V  94.3% (248/263)  IGHV4-59*01  206  ......T...............C...T..........G..G..........................................-------  288
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A        

                                      -------------------------CDR3-IMGT--------------------------------->                      
                                      S  R  D  C  P  S  N  A  C  Y  K  E  S  D  L  Y  P  Y  Y  G  M  D  L  W  G  Q  G  T  T  V  
                    Query_1210   271  GTCGAGATTGTCCCAGTAACGCCTGCTATAAGGAATCAGATCTTTACCCCTACTACGGTATGGACCTCTGGGGCCAAGGGACCACGGTCG  360
D  100.0% (8/8)     IGHD2-2*02   22   ----------------------........------------------------------------------------------------  29
J  96.2% (50/52)    IGHJ6*02     11   -------------------------------------------------................G.......................A  51

                                                 
                                      A  V  S  S 
                    Query_1210   361  CCGTCTCCTCA  371
J  96.2% (50/52)    IGHJ6*02     52   ...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_145195

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     1e-87
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CAAGGG	GGCTACGA	CTGGGGACC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACAAGGGGGCTACGACTGGGGACCCTTTGACCAG	AKQGGYDWGPFDQ	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	224	24	0	90.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  L  F  D  N  S  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1211   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCCTCTTTGACAACTCTGCCATGAACTGGGTCCGCCAGGCTCCTGGGAAGGGGCTGG  90
V  90.3% (224/248)  IGHV3-23*01  47   ...............................A...AC....AG..G..A........G..................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  L  S  G  G  G  E  T  T  H  F  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_1211   91   AGTGGGTCTCAGGTCTTAGTGGTGGTGGTGAAACCACACACTTCGCAGACTCCGTGAAGGGCCGGTTCAGTATCTCCAGAGACAATTCCA  180
V  90.3% (224/248)  IGHV3-23*01  137  ............C.A........A......GT.G....T...A..........................CC...................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  V  Y  L  Q  M  N  N  L  R  A  G  D  T  A  V  Y  Y  C  A  K  Q  G  G  Y  D  W  G  
                    Query_1211   181  AGAACACAGTGTATCTGCAAATGAACAACCTAAGAGCCGGGGACACGGCCGTATATTACTGTGCGAAACAAGGGGGCTACGACTGGGGAC  270
V  90.3% (224/248)  IGHV3-23*01  227  .......GC..................G...G.......A............................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD5-12*01  12   --------------------------------------------------------------------------........--------  19

                                      ---------->                                  
                                      P  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1211   271  CCTTTGACCAGTGGGGCCAGGGTACCCTGGTCACCGTCTCCTCAG  315
J  93.2% (41/44)    IGHJ4*02     5    -.......T.C...........A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_145194

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           416     2e-118
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCGTCCTGTAAAATATGGC	ACTATGAAAGTATTGGTTA	CTGTGGGTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCGTCCTGTAAAATATGGCACTATGAAAGTATTGGTTACTGTGGGTTCTTTGACTAC	ARDPSCKIWHYESIGYCGFFDY	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  N  F  T  S  N 
                    Query_1212   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACAACTTTACCAGCAAC  91
V  95.9% (278/290)  IGHV1-18*04  7    .................................................A..........................C..........T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  T  Y  S  G  N  T  K  Y  V  P 
                    Query_1212   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGATGGATCAGCACTTACAGTGGTAACACAAAATATGTACCG  181
V  95.9% (278/290)  IGHV1-18*04  97   .....................................T......................G......A............C....C..A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  S  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_1212   182  AAGCTCCAGGGCAGAGTCACCATGACCTCAGACACATCCACGAGCACAGCCTACATGGAACTGAGGAGCCTGAGATCTGACGATACGGCC  271
V  95.9% (278/290)  IGHV1-18*04  187  ...........................A...............................G.......................C......  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------------CDR3-IMGT--------------------------->            
                                       V  Y  Y  C  A  R  D  P  S  C  K  I  W  H  Y  E  S  I  G  Y  C  G  F  F  D  Y  W  G  Q  G 
                    Query_1212   272  GTGTATTACTGTGCGAGAGACCCGTCCTGTAAAATATGGCACTATGAAAGTATTGGTTACTGTGGGTTCTTTGACTACTGGGGCCAGGGA  361
V  95.9% (278/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  89.5% (17/19)    IGHD3-22*01  6    ----------------------------------------.......T....G......-------------------------------  24
J  100.0% (44/44)   IGHJ4*02     5    --------------------------------------------------------------------......................  26

                                                            
                                       T  L  V  T  V  S  S  
                    Query_1212   362  ACCCTGGTCACCGTCTCCTCAG  383
J  100.0% (44/44)   IGHJ4*02     27   ......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_196481

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            325     3e-91
IGHD4-4*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TAAAA	GACTACA	CAAACTGGTCCTTCC	TTGCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGATATAAAAGACTACACAAACTGGTCCTTCCTTGCCTAT	TRDIKDYTNWSFLAY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	252	10	8	2	0	80
Total	N/A	N/A	252	230	22	0	91.3


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  S  F  D  A  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1213  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTGATGCTTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  91.3% (230/252)  IGHV3-9*01  47   ....................................C........A............................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  I  S  W  T  G  G  S  I  G  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  A  
                    Query_1213  91   AGTGGGTCTCAGGCATTAGTTGGACTGGTGGCAGTATTGGCTATGCGGACTCTGTGCAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.3% (230/252)  IGHV3-9*01  137  .............T..........A.A....T..C..A..................A.................................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                     K  S  L  L  F  L  E  M  R  S  L  R  P  E  D  T  A  L  Y  F  C  T  R  D  I  K  D  Y  T  N  
                    Query_1213  181  AGAGTCTCCTATTTCTGGAAATGAGAAGTCTGAGACCTGAGGACACGGCCTTGTATTTCTGTACAAGAGATATAAAAGACTACACAAACT  270
V  91.3% (230/252)  IGHV3-9*01  227  ...ACTC...G.A....C......AC.........G.....................A....G...A.....------------------  298
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (7/7)     IGHD4-4*01  2    -----------------------------------------------------------------------------.......------  8

                                     ---------------->                                  
                                     W  S  F  L  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1213  271  GGTCCTTCCTTGCCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  95.2% (40/42)    IGHJ4*02    7    ---------...A...C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_196480

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           422     2e-120
IGHD5-12*01                                                                                           16.1    2.5   
IGHJ2*01                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAC	GGATGAGAGA	TGGCTACAATT	TTGTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACGGATGAGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTC	ATRMRDGYNFVDWYFDL	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  N  F  A  N  Y
                    Query_1214   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAACTTTGCCAACTA  90
V  96.6% (280/290)  IGHV5-51*01  6    .................................................................G...........G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_1214   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  96.6% (280/290)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  H  W  S  S  L  Q  A  S  D  T  A
                    Query_1214   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCACTGGAGTAGCCTCCAGGCCTCGGACACCGC  270
V  96.6% (280/290)  IGHV5-51*01  186  ............................................................G.....C.....GA................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  T  R  M  R  D  G  Y  N  F  V  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V
                    Query_1214   271  CATGTATTACTGTGCGACACGGATGAGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGT  360
V  96.6% (280/290)  IGHV5-51*01  276  .................G..----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  90.9% (10/11)    IGHD5-12*01  11   ------------------------------.......G...-------------------------------------------------  21
J  100.0% (51/51)   IGHJ2*01     3    -----------------------------------------------...........................................  45

                                              
                                        S  S  
                    Query_1214   361  CTCCTCAG  368
J  100.0% (51/51)   IGHJ2*01     46   ........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_104480

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           360     1e-101
IGHD5-18*01                                                                                           19.9    0.16  
IGHJ5*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTAGA	CAGGCAGCTTTC	GGATACAGTTTTGGTT	TCGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGACAGGCAGCTTTCGGATACAGTTTTGGTTTCGGCTGGTGCGACCCC	TRQAAFGYSFGFGWCDP	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	110	4	0	96.5
CDR3-IMGT (germline)	249	254	6	6	0	0	100
Total	N/A	N/A	254	242	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  G  D  Y  T  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1215   1    GGTCCCTGAGACTCTCCTGTTCAGCTTCTGGATTCACCTTTGGTGATTATACTATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.3% (242/254)  IGHV3-49*04  47   ....................A.............................G......G................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  A  F  I  R  S  K  T  H  G  G  T  T  E  Y  A  A  S  V  R  G  R  F  S  I  S  R  D  
                    Query_1215   91   AGTGGGTTGCTTTCATCAGAAGCAAAACTCATGGTGGGACAACAGAATACGCCGCGTCTGTGAGAGGCAGATTCAGCATCTCAAGAGATG  180
V  95.3% (242/254)  IGHV3-49*04  137  .......A.G......T.........G..T.................................A...........C..............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  G  V  Y  Y  C  T  R  Q  A  A  F  G  
                    Query_1215   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGGCGTGTATTATTGTACTAGACAGGCAGCTTTCGGAT  270
V  95.3% (242/254)  IGHV3-49*04  227  ......................................................C.........C.........----------------  300
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  87.5% (14/16)    IGHD5-18*01  3    --------------------------------------------------------------------------------------....  6

                                      DR3-IMGT-------------------->                                  
                                      Y  S  F  G  F  G  W  C  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1215   271  ACAGTTTTGGTTTCGGCTGGTGCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  87.5% (14/16)    IGHD5-18*01  7    ....C.A.....---------------------------------------------------  18
J  97.9% (46/47)    IGHJ5*02     5    ----------------.....T.........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_111555

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     8e-121
IGHD2-2*01                                                                                            21.8    0.046 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAGTAGTGAA	TACCAGCTGCT	GTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCC	ARSSSEYQLLFWFDP	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	282	11	0	96.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_1216   2    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCA  91
V  96.2% (282/293)  IGHV5-51*03  2    ....G................................................................G............C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  
                    Query_1216   92   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATATATCCTGGTGACTCTGATGCCAGATATA  181
V  96.2% (282/293)  IGHV5-51*03  92   .............................................................C..................A.......C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  K  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_1216   182  GTCCGTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTCAAGGCCTCGGACA  271
V  96.2% (282/293)  IGHV5-51*03  182  .C.........C.....................C..........................................G.............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  Y  C  A  R  S  S  S  E  Y  Q  L  L  F  W  F  D  P  W  G  Q  G  T  L  V  T  V  
                    Query_1216   272  CCGCCATGTATTATTGTGCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCA  361
V  96.2% (282/293)  IGHV5-51*03  272  .............C.........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (11/11)   IGHD2-2*01   16   -----------------------------------...........--------------------------------------------  26
J  97.9% (46/47)    IGHJ5*02     5    -------------------------------------------------........................................T  45

                                            
                                      T  S  
                    Query_1216   362  CCTCAG  367
J  97.9% (46/47)    IGHJ5*02     46   ......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_22283

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            346     2e-97
IGHD1-26*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	G	AGTGGGA	TGGCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGAGTGGGATGGCTCCCTGACTAC	VGGVGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  I  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1217   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCATTAGTGACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-7*01   47   ....................................C.T.....AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  E  K  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1217   91   AGTGGGTGGCCAACATAGAGAAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-7*01   137  .................A..C.................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  L  Y  Y  C  V  G  G  V  G  W  L  P  D  
                    Query_1217   181  AGAACTCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTCTGTATTACTGTGTGGGAGGAGTGGGATGGCTCCCTGACT  270
V  94.4% (235/249)  IGHV3-7*01   227  ...................A...A............C.............G............C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  6    ----------------------------------------------------------------------.......-------------  12
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1217   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_182722

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           417     6e-119
IGHD3-10*01                                                                                           23.8    0.013 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTAGAA	GGTTCGGGGAGT	CACGACTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTAGAAGGTTCGGGGAGTCACGACTCTTACTACTACGCTATGGACGTC	ARDPLEGSGSHDSYYYAMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  A  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  R  Y
                    Query_1218   1    GCAGCTGGTGCAGTCTGGAGCTGAGGCGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGGTA  90
V  95.9% (279/291)  IGHV1-46*01  6    ..................G.......T............................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  I  I  N  P  S  G  G  T  T  K  Y  A  Q
                    Query_1218   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCAATAATCAATCCTAGTGGTGGTACCACAAAATACGCACA  180
V  95.9% (279/291)  IGHV1-46*01  96   ..................................................G.........C.............G.....GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  D  L  T  S  L  R  S  E  D  T  A
                    Query_1218   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGACCTGACCAGCCTGAGATCTGAGGACACGGC  270
V  95.9% (279/291)  IGHV1-46*01  186  ............................................................G....G........................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        I  Y  Y  C  A  R  D  P  L  E  G  S  G  S  H  D  S  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T
                    Query_1218   271  CATCTATTACTGTGCGAGAGATCCTTTAGAAGGTTCGGGGAGTCACGACTCTTACTACTACGCTATGGACGTCTGGGGCCAAGGGACCAC  360
V  95.9% (279/291)  IGHV1-46*01  276  .G.G.................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD3-10*01  11   -------------------------------............-----------------------------------------------  22
J  98.1% (53/54)    IGHJ6*02     9    ----------------------------------------------------..........G...........................  46

                                                      
                                        V  T  V  S  S 
                    Query_1218   361  GGTCACCGTCTCCTCA  376
J  98.1% (53/54)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_110132

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD6-19*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	GTAGAGG	GCAGTGGCTGG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTAGAGGGCAGTGGCTGGAACTAC	ARVEGSGWNY	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  G  S  T  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_1219   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCGGCAGTACTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  95.2% (237/249)  IGHV4-39*01  49   ..................A....................A......G..........................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  I  D  T  S 
                    Query_1219   91   CTGGAGTGGATTGGGAGTATCTATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAAGAGTCGACTCACCATATCCATAGACACGTCC  180
V  95.2% (237/249)  IGHV4-39*01  139  ..........................T..............C........................G...........G...........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       E  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  V  E  G  S  G  W  N 
                    Query_1219   181  GAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTATCTATTACTGTGCCAGAGTAGAGGGCAGTGGCTGGAAC  270
V  95.2% (237/249)  IGHV4-39*01  229  A..................................................G.G...........G...---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD6-19*01  8    ----------------------------------------------------------------------------...........---  18
J  97.4% (38/39)    IGHJ4*02     10   ----------------------------------------------------------------------------------------..  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  I  S  S  
                    Query_1219   271  TACTGGGGCCAGGGAACCCTGGTCACCATCTCCTCAG  307
J  97.4% (38/39)    IGHJ4*02     12   ...........................G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_244219

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           416     2e-118
IGHD1-20*01                                                                                           29.5    2e-04 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-20*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGAAAA	TATAACTGGAACGAC	GGAAT	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATC	ARVGKYNWNDGIAFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N  S  F
                    Query_1220   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAACAGCTT  90
V  95.9% (278/290)  IGHV1-69*01  6    ..........................................C........................................G.....A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  N  W  V  R  Q  A  P  G  H  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  K  Y  A  Q
                    Query_1220   91   TGCTGTCAACTGGGTGCGACAGGCCCCTGGACATGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAACAAAATACGCACA  180
V  95.9% (278/290)  IGHV1-69*01  96   ....A...G........................A..........................................G....C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_1220   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGGACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.9% (278/290)  IGHV1-69*01  186  .............................................C....C.......................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  V  G  K  Y  N  W  N  D  G  I  A  F  D  I  W  G  Q  G  T  I  V  T  V  S
                    Query_1220   271  CGTTTATTATTGTGCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATCTGGGGCCAAGGGACAATAGTCACCGTCTC  360
V  95.9% (278/290)  IGHV1-69*01  276  ...G.....C..........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (15/15)   IGHD1-20*01  3    ----------------------------...............-----------------------------------------------  17
J  95.7% (45/47)    IGHJ3*02     4    ------------------------------------------------...T..........................G...........  45

                                           
                                        S  
                    Query_1220   361  TTCAG  365
J  95.7% (45/47)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_244214

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            397     8e-113
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_1221  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.8% (272/290)  IGHV1-8*02  6    .............................................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_1221  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.8% (272/290)  IGHV1-8*02  96   ........A.........................................................C.......................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_1221  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.8% (272/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  G  T  V  S  S  
                    Query_1221  271  CGTATATTACTGTGCGAGAGCCCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGGCACCGTCTCCTCAG  353
V  93.8% (272/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  95.0% (38/40)    IGHJ4*02    9    -------------------------------------------....A....................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_244217

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           307     1e-85
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	220	24	0	90.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  I  S  G  G  S  I  N  K  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_1222   4    CCCTGAGACTCTCCTGCACTATCTCTGGTGGCTCCATCAATAAATACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  90.2% (220/244)  IGHV4-59*01  50   .....TCC...A........G..................G..GT........................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  V  S  V  D  T  S  K  S  
                    Query_1222   94   GGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCGTTTCAGTAGACACGTCCAAGAGCC  183
V  90.2% (220/244)  IGHV4-59*01  140  .......G......T..........G.GC.............................A.T....A.A...................A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  I  S  L  S  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F  
                    Query_1222   184  AGATCTCCCTGAGCCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTTG  273
V  90.2% (220/244)  IGHV4-59*01  230  ..T.........AG........................A.......G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------------------------.......C.G..A..  15

                                      ------------------->                                  
                                      G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_1222   274  GTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  327
D  83.3% (15/18)    IGHD5-18*01  16   ...---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    -----...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_244211

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            383     1e-108
IGHD3-9*01                                                                                            35.3    4e-06 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	ATTACGATATCTTGACTGGTAATT	GGGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCATTACGATATCTTGACTGGTAATTGGGCGTTTGATTAC	ARDHYDILTGNWAFDY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	268	23	0	92.1


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  D  Y
                    Query_1223  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACTTTCAGCGACTA  90
V  92.1% (268/291)  IGHV1-2*04  6    ..................G...........................................................C....C..G...  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       Y  I  H  W  V  R  Q  G  P  G  Q  G  L  E  W  M  G  W  I  N  P  R  T  G  D  T  N  Y  A  Q
                    Query_1223  91   CTATATCCACTGGGTGCGACAGGGCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTCGGACTGGAGACACAAATTATGCACA  180
V  92.1% (268/291)  IGHV1-2*04  96   ......G................C........................................AAC.G...T.G......C........  185
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       R  F  Q  G  W  V  T  M  S  R  D  T  S  T  T  T  V  Y  M  D  L  S  R  L  K  S  D  D  T  A
                    Query_1223  181  GAGGTTTCAGGGCTGGGTCACCATGTCTAGGGACACGTCCACCACCACAGTTTACATGGACCTGAGCAGGCTGAAATCTGACGACACGGC  270
V  92.1% (268/291)  IGHV1-2*04  186  ..A......................A.C.............T..G.....CC........G.............G...............  275
                                       K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                     ------------><-------------------CDR3-IMGT------------------>                             
                                       V  Y  Y  C  A  R  D  H  Y  D  I  L  T  G  N  W  A  F  D  Y  W  G  Q  G  T  L  L  T  V  S
                    Query_1223  271  CGTTTATTACTGTGCGAGAGATCATTACGATATCTTGACTGGTAATTGGGCGTTTGATTACTGGGGCCAGGGAACCCTGCTCACCGTCTC  360
V  92.1% (268/291)  IGHV1-2*04  276  ...G.................---------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                        
D  91.7% (22/24)    IGHD3-9*01  3    -----------------------..........T.........T...-------------------------------------------  26
J  95.3% (41/43)    IGHJ4*02    6    ----------------------------------------------------.....C.....................G..........  43

                                          
                                       S  
                    Query_1223  361  CTCAG  365
J  95.3% (41/43)    IGHJ4*02    44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_244212

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD1-26*01                                                                                           23.8    0.012 
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGTATGCCGTCC	TGGGAGCTACTA	GT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTATGCCGTCCTGGGAGCTACTAGTTGGTTCGACCCC	AKYAVLGATSWFDP	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	268	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  E  P  G  E  S  L  R  I  S  C  R  G  S  G  Y  T  F  I  S  Y
                    Query_1224   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAGAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGCTCTGGGTACACCTTTATTAGTTA  90
V  93.4% (268/287)  IGHV5-51*01  6    ....................C..........A..................A...........A...T.....A....G.....CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  N  P
                    Query_1224   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGAGACCAGATACAACCC  180
V  93.4% (268/287)  IGHV5-51*01  96   C.......G...........................................A......................T..........G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  L  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  S  L  K  A  S  D  T  A
                    Query_1224   181  GTCCTTCCAAGGCCACGTCACCCTCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCACTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (268/287)  IGHV5-51*01  186  ...............G......A.....................G...............G.............................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  K  Y  A  V  L  G  A  T  S  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_1224   271  CATGTATTACTGTGCGAAGTATGCCGTCCTGGGAGCTACTAGTTGGTTCGACCCCTGGGGCCAGGGAACCCTAGTCATCGTCTCCTCAG  359
V  93.4% (268/287)  IGHV5-51*01  276  .................------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                          
D  100.0% (12/12)   IGHD1-26*01  8    -----------------------------............------------------------------------------------  19
J  95.7% (44/46)    IGHJ5*02     6    -------------------------------------------.............................G....C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_244213

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           322     2e-90
IGHD3-3*01                                                                                            27.6    7e-04
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	TTGGAGTGGTTATT	TATA	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATTGGAGTGGTTATTTATAGACTTC	ARELEWLFIDF	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  N  G  S  Y  Y  W  T  W  I  R  Q  A  P  G  K  G  
                    Query_1225   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCGTCAGCAATGGGAGTTACTACTGGACCTGGATCCGGCAGGCCCCAGGGAAGGGAC  93
V  91.2% (228/250)  IGHV4-61*01  50   .....TCC...A....C.........................G...T.............G.............C...............  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  C  I  F  T  S  G  T  T  N  Y  H  P  S  L  K  S  R  V  T  I  S  I  D  T  S  
                    Query_1225   94   TGGAGTGGATTGGGTGTATCTTTACTAGTGGGACCACCAACTACCATCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCA  183
V  91.2% (228/250)  IGHV4-61*01  140  ...............A.....A.TAC.......G..........A.C..............................G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  L  E  W  L  F  I  
                    Query_1225   184  AGAATCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTATTGTGCGAGAGAATTGGAGTGGTTATTTATAG  273
V  91.2% (228/250)  IGHV4-61*01  230  ....C...............C...............................G.....C...........--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD3-3*01   13   -----------------------------------------------------------------------..............-----  26
J  95.0% (38/40)    IGHJ4*02     9    -----------------------------------------------------------------------------------------.  9

                                      ---->                                  
                                      D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_1225   274  ACTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  312
J  95.0% (38/40)    IGHJ4*02     10   ...A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_47061

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           277     1e-76
IGHD2-15*01                                                                                           12.2    34   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTC	ATTGTA	T	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTCATTGTATTACGGTATGGACGTC	ARGVADDGWRGGRRVSLYYGMDV	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	211	34	0	86.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  H  C  W  T  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_1226   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTTAGTGGTCACTGCTGGACCTGGATTCGCCAGACACCAGGGAAGGGACTGGAA  90
V  86.1% (211/245)  IGHV4-34*01  49   ......................................C......T...A.....G......C......C.C...........G.....G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  M  N  H  K  G  R  T  T  Y  N  P  S  L  M  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1226   91   TGGATTGGTGAGATGAATCACAAAGGCAGGACGACCTACAACCCGTCGCTAATGAGTCGAGTCACCATCTCAGTGGACACGTCCAAGAAT  180
V  86.1% (211/245)  IGHV4-34*01  139  ........G..A..C.....T.GT..A..C..C.A............C..C.A...............A.....A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  L  S  L  R  L  T  S  L  I  A  A  D  T  A  M  Y  Y  C  A  R  G  V  A  D  D  G  W  R  G 
                    Query_1226   181  CAGCTCTCCCTGAGATTGACCTCTTTAATCGCCGCGGACACGGCTATGTATTACTGTGCGAGAGGCGTGGCGGATGACGGGTGGCGGGGG  270
V  86.1% (211/245)  IGHV4-34*01  229  ...T.........AGC...G....G.G.C................G...................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      3-IMGT----------------------------->                                 
                                       G  R  R  V  S  L  Y  Y  G  M  D  V  W  G  Q  G  V  T  V  T  V  S  S 
                    Query_1226   271  GGCAGACGCGTGTCATTGTATTACGGTATGGACGTCTGGGGCCAGGGAGTCACGGTCACCGTCTCCTCA  339
D  100.0% (6/6)     IGHD2-15*01  6    --------------......-------------------------------------------------  11
J  91.7% (44/48)    IGHJ6*02     15   ---------------------.......................A..GAC...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_47060

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           218     6e-59
IGHD3-3*01                                                                                            23.8    0.010
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTCTTTAATG	ACGATTATTGGAGTG	ATGATTTTCGTCGACACCTAGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCTTTAATGACGATTATTGGAGTGATGATTTTCGTCGACACCTAGGGCTTGACAAC	ARHVFNDDYWSDDFRRHLGLDN	215	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR2-IMGT	58	79	22	20	2	0	90.9
CDR2-IMGT	80	100	21	20	1	0	95.2
FR3-IMGT	101	214	114	104	10	0	91.2
CDR3-IMGT (germline)	215	222	8	8	0	0	100
Total	N/A	N/A	165	152	13	0	92.1


Alignments

                                      <------FR2-IMGT------><-----CDR2-IMGT-----><----------------------------------------------
                                        G  L  E  W  I  G  N  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  H  T
                    Query_1227   58   GGGGCTGGAGTGGATTGGAAATATCTATTATAGTGGGACCACCTACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCCGTGCACAC  147
V  92.1% (152/165)  IGHV4-39*01  135  ..................G.G.................G...............G.......................A.....AG....  224
                                        G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T

                                      ------FR3-IMGT----------------------------------------------------><----------------------
                                        S  K  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  H  V  F  N  D  D
                    Query_1227   148  GTCCAAGAATCAGTTCTCCCTGAGGCTGAATTCTGTGACCGCCGCAGACTCGGCTGTATATTACTGTGCGAGACATGTCTTTAATGACGA  237
V  92.1% (152/165)  IGHV4-39*01  225  .........C.............A.....GC..................A.......G.................---------------  299
                                        S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                  
D  93.3% (14/15)    IGHD3-3*01   6    --------------------------------------------------------------------------------------....  9

                                      ------CDR3-IMGT--------------------------->                                  
                                        Y  W  S  D  D  F  R  R  H  L  G  L  D  N  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_1227   238  TTATTGGAGTGATGATTTTCGTCGACACCTAGGGCTTGACAACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  314
D  93.3% (14/15)    IGHD3-3*01   10   ..T........------------------------------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------.....T........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_47063

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         360     1e-101
IGHD3-10*01                                                                                           10.3    115   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GA	GGGGA	CAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAGGGGACATTATGGACGTC	ARGGDIMDV	244	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_1228     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  H  S  G  L  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  R  S 
                    Query_1228     91   CTGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACAGGTCC  180
V  96.0% (240/250)  IGHV4-30-2*01  139  ..............G......T...........AG..C.T...A......................G.......................  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                         K  N  Q  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  D  I  M  D  V 
                    Query_1228     181  AAGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAGGGGACATTATGGACGTC  270
V  96.0% (240/250)  IGHV4-30-2*01  229  ...........C.......A..................................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01    16   ------------------------------------------------------------------------.....-------------  20
J  100.0% (43/43)   IGHJ6*02       20   --------------------------------------------------------------------------------..........  29

                                                                         
                                         W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1228     271  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  303
J  100.0% (43/43)   IGHJ6*02       30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_121015

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     1e-87
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAAA	CTTTCGAC	AGTAGTGGTTAT	CGGAC	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAACTTTCGACAGTAGTGGTTATCGGACACAACTGGTTGGCCCCC	GKLSTVVVIGHNWLAP	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	224	24	0	90.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  P  A  S  G  F  T  F  S  H  Y  A  M  T  W  V  R  Q  A  P  G  K  R  L  
                    Query_1229   1    GGTCCCTGAGACTCTCCTGTCCAGCCTCTGGATTCACATTTAGTCACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGAGGCTGG  90
V  90.3% (224/248)  IGHV3-23*01  47   ....................G................C.....CAG...........G.........................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  L  S  G  S  G  L  S  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1229   91   AGTGGGTCTCCGCTCTTAGTGGTAGTGGTCTTAGCACTTACTATACAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  90.3% (224/248)  IGHV3-23*01  137  ..........A...A..............GG......A.....CG...................G.....................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  N  T  L  Y  L  Q  M  E  S  L  S  A  D  D  T  A  V  Y  F  C  G  K  L  S  T  V  V  V  I  
                    Query_1229   181  ACAACACGTTGTATCTGCAAATGGAGAGCCTGAGCGCCGACGACACGGCCGTATATTTCTGTGGGAAACTTTCGACAGTAGTGGTTATCG  270
V  90.3% (224/248)  IGHV3-23*01  227  .G......C..............A.C........A.....G................A.....C....----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD3-22*01  14   ----------------------------------------------------------------------------............--  25

                                      T------------------>                                  
                                      G  H  N  W  L  A  P  W  G  P  G  T  L  V  T  V  S  S  
                    Query_1229   271  GACACAACTGGTTGGCCCCCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  324
J  94.1% (48/51)    IGHJ5*02     1    ---..........C.A...........A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_47065

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            417     6e-119
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	273	6	0	97.8


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_1230  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  97.8% (273/279)  IGHV6-1*01  26   ...........................................................G......G....AG.................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_1230  91   TCAGGCAGTCCCCATCCAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  97.8% (273/279)  IGHV6-1*01  116  ................G.........................................................................  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_1230  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  97.8% (273/279)  IGHV6-1*01  206  ..............A...........................................................................  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------CDR3-IMGT--------->                                  
                                     C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1230  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  97.8% (273/279)  IGHV6-1*01  296  .........---------------------------------------------------------  304
                                     C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02    4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_121013

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q 
                    Query_1231   1    ACCCTGTCCCTCACCTGCACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAA  90
V  91.0% (223/245)  IGHV4-59*01  49   ....................T..........................C........C............C.................G.G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_1231   91   TGGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAAC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A....G.....C...T....T....G......C..............C...........C.C.........A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E 
                    Query_1231   181  CAGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAG  270
V  91.0% (223/245)  IGHV4-59*01  229  ...T.........AG..G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  1    -----------------------------------------------------------------------------............-  12

                                      -------------->                                  
                                       D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_1231   271  GATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  319
J  92.5% (37/40)    IGHJ4*02     9    ---------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_47067

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_1232   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_1232   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.2% (226/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  G  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_1232   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGGCGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.2% (226/245)  IGHV4-59*01  229  .............A.......................A.A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_1232   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_47069

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           297     7e-83
IGHD3-3*01                                                                                            21.8    0.041
IGHJ5*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCCTTGGGGG	TTTTTGGAGTG	AGAACATTTGGAA	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCTTGGGGGTTTTTGGAGTGAGAACATTTGGAACGACCCC	ATLGGFWSENIWNDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	218	28	0	88.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  R  S  F  T  V  N  W  V  R  Q  A  P  G  R  R  L  
                    Query_1233   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGAAGTTTTACAGTGAATTGGGTCCGCCAGGCTCCAGGGAGGAGGCTGG  90
V  88.6% (218/246)  IGHV3-21*01  47   ...................................A.......T..C.A..GCA....C......................A.G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  N  S  G  S  Y  I  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_1233   91   AGTGGGTCTCATCCATCAGTAACAGTGGAAGTTATATATATTATGCAGAGTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  88.6% (218/246)  IGHV3-21*01  137  ................T....GT...A.T.....C.....C..C.....C..A.................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  L  L  F  L  E  M  T  S  L  R  V  E  D  T  A  V  Y  Y  C  A  T  L  G  G  F  W  S  E  
                    Query_1233   181  AGAACTTACTGTTTCTGGAAATGACCAGTCTGAGAGTCGAGGACACGGCTGTATATTACTGTGCGACCCTTGGGGGTTTTTGGAGTGAGA  270
V  88.6% (218/246)  IGHV3-21*01  227  ......C.....A....C......A...C.......C...............G.............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD3-3*01   10   ----------------------------------------------------------------------------...........---  20

                                      ---------------->                             
                                      N  I  W  N  D  P  W  G  Q  G  T  L  V  I  V  S
                    Query_1233   271  ACATTTGGAACGACCCCTGGGGCCAGGGTACCCTGGTCATCGTCTC  316
J  94.4% (34/36)    IGHJ5*02     11   ----------..................A..........C......  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_47068

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           349     3e-98
IGHD2-15*01                                                                                           33.4    2e-05
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATGAAA	GATATTGTAGTGAAGGTAGTTGCTAC	CCTACA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTACCCTACATACTTTGACTTC	ARYERYCSEGSCYPTYFDF	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	256	33	0	88.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  K  I  S  C  K  T  S  G  Y  S  F  S  N  Y
                    Query_1234   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAAAAGCCCGGGCAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGTTTCAGCAACTA  90
V  88.6% (256/289)  IGHV5-51*01  6    .....................A..................G.......................GG............C..T.C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  S  G  E  G  L  E  W  M  G  I  I  Y  A  G  D  S  D  I  T  Y  S  P
                    Query_1234   91   TTGGATCGGCTGGGTGCGCCAGATGTCCGGTGAAGGCCTGGAGTGGATGGGAATCATCTATGCTGGCGACTCTGACATCACATATAGTCC  180
V  88.6% (256/289)  IGHV5-51*01  96   C........................C....GA...................G.........C....T........T.C..G...C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  R  V  T  I  S  V  D  K  A  I  D  T  A  Y  V  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1234   181  GTCCTTTGAGGGCCGGGTCACCATCTCAGTCGACAAGGCCATCGACACCGCCTACGTACAGTGGAGCAGTCTGAAGGCCTCGGACACCGC  270
V  88.6% (256/289)  IGHV5-51*01  186  ......CC.A....A..............C.......T.....AG..........C.G...........C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        T  Y  Y  C  A  R  Y  E  R  Y  C  S  E  G  S  C  Y  P  T  Y  F  D  F  W  G  Q  G  T  P  V
                    Query_1234   271  CACATATTACTGTGCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTACCCTACATACTTTGACTTCTGGGGCCAGGGAACCCCGGT  360
V  88.6% (256/289)  IGHV5-51*01  276  ..TG...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  88.5% (23/26)    IGHD2-15*01  3    --------------------------............GT.....C......--------------------------------------  28
J  95.7% (44/46)    IGHJ4*02     3    ----------------------------------------------------------..........A.................T...  34

                                                    
                                        T  V  S  S  
                    Query_1234   361  CACCGTCTCCTCAG  374
J  95.7% (44/46)    IGHJ4*02     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_120767

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           325     2e-91
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AGCCTTTCACA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGAAGCCTTTCACATTGACTAC	GREAFHIDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  R  S  S  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1235   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCAACTTCAGGAGTTCTAGCATGACCTGGGTCCGCCAGGCTCCGGGGAAGGGACTGG  90
V  91.6% (229/250)  IGHV3-21*01  47   ............................T.......C......T..C.A........A..................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  N  S  A  S  N  F  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_1235   91   AGTGGGTCTCATCCATTAATAGTGCTAGTAATTTCATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  91.6% (229/250)  IGHV3-21*01  137  ..................G....AG.....G..A....................................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  V  F  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  F  C  G  R  E  A  F  H  I  D  Y  
                    Query_1235   181  AGAACTCAGTCTTTCTGCAGATGAGCAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGGGAGAGAAGCCTTTCACATTGACTACT  270
V  91.6% (229/250)  IGHV3-21*01  227  ........C.G.A......A....A................................A.....C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------------.........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1235   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (42/42)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_120766

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_1236   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_1236   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_1236   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_1236   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_120765

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-10*01                                                                                           41.1    7e-08
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	ATGGACCTCAA	TACTACGATTCGGGGAGTTATTATAAC	GAAC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATGGACCTCAATACTACGATTCGGGGAGTTATTATAACGAACTTGACTAC	ANGPQYYDSGSYYNELDY	237	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	113	1	0	99.1
CDR3-IMGT (germline)	237	240	4	4	0	0	100
Total	N/A	N/A	228	222	6	0	97.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  I  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  
                    Query_1237   13   GTACAGCCTCTGGATTCATCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTA  102
V  97.4% (222/228)  IGHV3-21*01  65   ..G...............C.......AG..............................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  S  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  H  S  L  Y  L  
                    Query_1237   103  GTAGTAGTAGTACTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGCACTCACTGTATCTGC  192
V  97.4% (222/228)  IGHV3-21*01  155  ............G.............................................................A...............  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------------CDR3-IMGT--------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  N  G  P  Q  Y  Y  D  S  G  S  Y  Y  N  E  
                    Query_1237   193  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAATGGACCTCAATACTACGATTCGGGGAGTTATTATAACGAAC  282
V  97.4% (222/228)  IGHV3-21*01  245  ................................................------------------------------------------  292
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  92.6% (25/27)    IGHD3-10*01  5    -----------------------------------------------------------.....T.G...................----  31

                                      ------->                                  
                                      L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1237   283  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (42/42)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_120764

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           352     3e-99
IGHD5-18*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGTCATGGTTAC	GGAGGAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGTCATGGTTACGGAGGAATTGACTAC	ARYSHGYGGIDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	234	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1238   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (234/243)  IGHV4-59*01  49   ...............................G........G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  S  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  K  N 
                    Query_1238   91   TGGATTGGTTATATCTACTACCGTGGGAGCTCCAACTCCAACCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAAGAAC  180
V  96.3% (234/243)  IGHV4-59*01  139  ........G........T...A........A......A......................G.............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  I  D 
                    Query_1238   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGTCATGGTTACGGAGGAATTGAC  270
V  96.3% (234/243)  IGHV4-59*01  229  .............A.................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  86.7% (13/15)    IGHD5-18*01  6    ---------------------------------------------------------------.....CT........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1238   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_120763

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           341     5e-96
IGHD4-4*01                                                                                            18.0    0.58 
IGHJ5*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-4*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGGCA	TGACTACAG	AAAAGGGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGGCATGACTACAGAAAAGGGGACTGGTTCGACTCC	ARGGHDYRKGDWFDS	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  G  W  I  R  Q  H  P  G  K  G 
                    Query_1239   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGGGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  93.6% (234/250)  IGHV4-31*03  49   ............................................................A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  M  S  R  V  S  L  S  V  D  T  S 
                    Query_1239   91   CTGGAGTGGATTGGCTTCATCTACTATAGTGGGACCACCTACTACAACCCGTCCCTCATGAGTCGAGTTAGTTTATCAGTGGACACGTCT  180
V  93.6% (234/250)  IGHV4-31*03  139  ..............G.A......T..C.......G.......................A...........CCA.......A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  H  D  Y  R  K 
                    Query_1239   181  AAGAACCAGTTCTCCCTGAGGCTGACCTCCGTGACTGCCGCGGACACGGCCGTTTATTATTGTGCGAGAGGAGGGCATGACTACAGAAAA  270
V  93.6% (234/250)  IGHV4-31*03  229  ...................A.....G...T.......................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD4-4*01   1    -----------------------------------------------------------------------------.........----  9

                                      ----------------->                                  
                                       G  D  W  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1239   271  GGGGACTGGTTCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  322
J  95.8% (46/48)    IGHJ5*01     4    ----......................A....................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_274649

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD5-18*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGCCATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGCCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	240	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_1240   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAAAGACTGGAG  90
V  98.8% (240/243)  IGHV4-59*01  49   .........................................T......................................GG........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1240   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (240/243)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D 
                    Query_1240   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGCCATGGTTACGGAGGAGTTGAC  270
V  98.8% (240/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD5-18*01  6    ---------------------------------------------------------------......T........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1240   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_120761

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            360     1e-101
IGHD3-22*01                                                                                           37.2    1e-06 
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TG	ATTACTATGATAGTAGTGG	GCGTTTGCGGC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATTACTATGATAGTAGTGGGCGTTTGCGGCAC	ARDDYYDSSGRLRH	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	64	5	0	92.8
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	260	30	0	89.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  S  G  A  S  V  K  V  Y  C  E  A  S  G  Y  T  F  R  N  Y 
                    Query_1241   2    CAGCTGGTGCAGTCTGGGGCTGAAGTGAAGAAGTCTGGGGCCTCAGTGAAGGTTTACTGCGAGGCTTCTGGATACACCTTCAGGAACTAC  91
V  89.7% (260/290)  IGHV1-3*01   7    .....T.................G.........C.....................C....A.....................CT.G...T  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  N  W  V  R  Q  A  P  G  H  R  F  E  W  V  G  W  I  N  A  D  N  G  N  T  K  Y  S  Q 
                    Query_1241   92   GCTATCAATTGGGTGCGCCAGGCCCCCGGACACAGGTTTGAGTGGGTGGGGTGGATCAACGCTGACAATGGGAACACAAAATATTCACAG  181
V  89.7% (260/290)  IGHV1-3*01   97   .....GC.........................A...C........A....A.............G......T..................  186
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  F  T  R  D  T  G  A  N  R  V  N  M  E  M  S  G  L  R  S  E  D  T  G 
                    Query_1241   182  AAGTTCCAGGGCAGAGTCACCTTTACCAGGGACACAGGCGCGAACAGAGTCAACATGGAAATGAGCGGTCTGAGATCTGAAGACACGGGT  271
V  89.7% (260/290)  IGHV1-3*01   187  .....................A..............TC.....G..C..C.T.......GC.....A.C...................C.  276
                                       K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  D  D  Y  Y  D  S  S  G  R  L  R  H  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_1241   272  GTATATTACTGTGCGAGAGATGATTACTATGATAGTAGTGGGCGTTTGCGGCACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  359
V  89.7% (260/290)  IGHV1-3*01   277  ..G.................--------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (19/19)   IGHD3-22*01  3    ----------------------...................-----------------------------------------------  21
J  97.2% (35/36)    IGHJ4*02     13   ----------------------------------------------------........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_104482

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            414     5e-118
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CACA	TACTATCCTTCGGGGAGTT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATACTATCCTTCGGGGAGTTTACTACGGTATGGACGTC	ARAHTILRGVYYGMDV	273	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	30	0	0	100
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	24	3	0	88.9
FR3-IMGT	159	272	114	112	2	0	98.2
CDR3-IMGT (germline)	273	279	7	6	1	0	85.7
Total	N/A	N/A	279	272	7	0	97.5


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  M  S  G  D  S  V  S  S  N  S  A  A  W  N  W  
                    Query_1242   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATGTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGA  90
V  97.5% (272/279)  IGHV6-1*01   26   ..............................................C...........................................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  R  W  Y  T  D  Y  A  V  S  V  K  
                    Query_1242   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCGAGGTGGTATACTGATTATGCAGTCTCTGTGAAAA  180
V  97.5% (272/279)  IGHV6-1*01   116  .......................................................C.A........A............A..........  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_1242   181  GTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTCTATTACT  270
V  97.5% (272/279)  IGHV6-1*01   206  ..................................................................................G.......  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-------------------CDR3-IMGT------------------>                                 
                                      C  A  R  A  H  T  I  L  R  G  V  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1242   271  GTGCGAGAGCACATACTATCCTTCGGGGAGTTTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  353
V  97.5% (272/279)  IGHV6-1*01   296  ....A....--------------------------------------------------------------------------  304
                                      C  A  R                                                                            
D  89.5% (17/19)    IGHD3-10*01  5    -------------......GG...........---------------------------------------------------  23
J  100.0% (51/51)   IGHJ6*02     12   --------------------------------...................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_274645

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           363     1e-102
IGHD6-19*01                                                                                           14.1    8.1   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCCTCCTTA	GGCTGGT	CGGGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCTCCTTAGGCTGGTCGGGAATGACTAC	ATLLRLVGNDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  T  F  T  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1243   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTAGATTCACCTTTACCAACTACGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (239/246)  IGHV3-23*01  47   .............................G............G..G...T........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1243   91   AGTGGGTCTCATCTATTACTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  97.2% (239/246)  IGHV3-23*01  137  ...........G......G.......................................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  T  L  L  R  L  V  G  N  
                    Query_1243   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGACCCTCCTTAGGCTGGTCGGGAATG  270
V  97.2% (239/246)  IGHV3-23*01  227  ..................................................G...............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD6-19*01  13   ---------------------------------------------------------------------------.......--------  19
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1243   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (41/41)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_274646

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD6-13*01                                                                                           14.1    9.8   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGCG	GCAACACCTGGTA	TCGAGATTCTCAGGCCGGCAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGCGGCAACACCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGAC	ARHSGNTWYRDSQAGIYFDD	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  G  G  Y
                    Query_1244   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCCCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCGGCTA  90
V  94.8% (276/291)  IGHV5-51*01  6    .............................................T....................................AC.A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_1244   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAACCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ......................................................................................G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  R  S  L  G  T  A  Y  L  Q  W  P  S  L  K  A  S  D  T  A
                    Query_1244   181  GTCCTTTCAAGGACAGGTCACCATCTCAGTCGACAGGTCCCTCGGAACCGCCTACCTGCAGTGGCCCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  ......C.....C................C.....A....A..A.C..................AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  Y  C  A  R  H  S  G  N  T  W  Y  R  D  S  Q  A  G  I  Y  F  D  D  W  G  Q  G  T  L
                    Query_1244   271  CATGTACTACTGTGCGAGACACAGCGGCAACACCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGACTGGGGCCAGGGAACCCT  360
V  94.8% (276/291)  IGHV5-51*01  276  ......T..............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  84.6% (11/13)    IGHD6-13*01  8    --------------------------...G..G......---------------------------------------------------  20
J  95.7% (45/47)    IGHJ4*02     2    ------------------------------------------------------------......T...T...................  31

                                                       
                                        V  T  V  S  S  
                    Query_1244   361  GGTCACCGTCTCCTCAG  377
J  95.7% (45/47)    IGHJ4*02     32   .................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_274640

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_1245   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.2% (241/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  G  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1245   91   CTGGAATGGATTGGGAATATCTATTACGGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.2% (241/248)  IGHV4-31*03  139  .....G.........T.C.........A..............................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_1245   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.2% (241/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1245   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_133817

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           260     1e-71
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	93	21	0	81.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	205	39	0	84


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_1246   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  84.0% (205/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_1246   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  84.0% (205/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_1246   181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACGTAT  270
V  84.0% (205/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_1246   271  GTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    ---------------------------------...G....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_274642

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           310     1e-86
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	N/A	TCATCCTTCCG	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATCCTTCCGACTATGGTTTGGGCGTC	AKDHPSDYGLGV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  D  F  G  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1247   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCAACTTCAGCGACTTTGGCTTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGC  90
V  89.6% (224/250)  IGHV3-30*18  47   ...............................A....C......TAG..A....A...................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      H  W  L  A  V  I  S  Y  D  G  S  I  R  H  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1247   91   ACTGGCTGGCAGTTATATCATATGATGGATCTATTAGACACTATGCAAACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  89.6% (224/250)  IGHV3-30*18  137  .G...G.......................AG..A..A.T........G..........................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  L  K  G  L  T  T  E  D  T  A  M  Y  Y  C  A  K  D  H  P  S  D  Y  G  
                    Query_1247   181  AGAACACGTTGTATCTTCAATTGAAGGGACTTACAACTGAGGACACGGCTATGTATTACTGTGCGAAAGATCATCCTTCCGACTATGGTT  270
V  89.6% (224/250)  IGHV3-30*18  227  ........C.......G...A....CA.C..G.G.G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
J  89.8% (44/49)    IGHJ6*02     13   ---------------------------------------------------------------------------------....C...A  21

                                      ------->                                
                                      L  G  V  W  G  Q  G  T  T  V  I  V  S  S
                    Query_1247   271  TGGGCGTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTC  310
J  89.8% (44/49)    IGHJ6*02     22   ...A............A.............C.........  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_120768

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           300     8e-84
IGHD3-10*01                                                                                           41.1    7e-08
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAC	TATTATTATGGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTATTATTATGGTTCGGGGAGTTATTTTGACTTC	ARGHYYYGSGSYFDF	250	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	33	33	27	0	6	81.8
CDR1-IMGT	34	63	30	25	5	0	83.3
FR2-IMGT	64	114	51	43	8	0	84.3
CDR2-IMGT	115	135	21	21	0	0	100
FR3-IMGT	136	249	114	103	11	0	90.4
CDR3-IMGT (germline)	250	256	7	7	0	0	100
Total	N/A	N/A	256	226	24	6	88.3


Alignments

                                      <-----------FR1-IMGT------------><----------CDR1-IMGT---------><--------------------FR2-IM
                                       T  L  S  L  T  C  T  V  T  F  S  H  G  S  I  S  S  G  G  S  Y  W  N  W  V  P  Q  H  P  E 
                    Query_1248   1    ACCCTGTCCCTCACCTGCACTGTCACTTTCTCTCATGGCTCCATTAGCAGTGGCGGTTCCTACTGGAACTGGGTCCCCCAGCACCCCGAG  90
V  88.3% (226/256)  IGHV4-31*03  49   ........................------...GG.........C........T....A........G....A...G.........A.G.  132
                                       T  L  S  L  T  C  T  V        S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  G  L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  V  D 
                    Query_1248   91   AAAGGGCTGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCCGGAGTCGACTTACCATATCAGTGGAC  180
V  88.3% (226/256)  IGHV4-31*03  133  ..G..C...............T.........................................AA.......G.............A...  222
                                       K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-----------------CDR
                                       T  S  K  N  Q  L  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  Y  Y  Y 
                    Query_1248   181  ACGTCTAAGAATCAATTGTCCCTGAGGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTATTGTGCGAGAGGCCACTATTATTAT  270
V  88.3% (226/256)  IGHV4-31*03  223  ...........C..G..C.......A......C..........................G.....C..........--------------  298
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  95.8% (23/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------------.....C...  10

                                      3-IMGT----------------->                                  
                                       G  S  G  S  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1248   271  GGTTCGGGGAGTTATTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.8% (23/24)    IGHD3-10*01  11   ...............-------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_128573

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           324     8e-91
IGHD3-3*01                                                                                            21.8    0.042
IGHJ5*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGATGGGGAAGGG	ACGATTTTTGG	GATGGGGTGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGATGGGGAAGGGACGATTTTTGGGATGGGGTGAGGTTCGACTCT	ARGRWGRDDFWDGVRFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  S  L  T  G  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1249   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCAGCCTCACAGGCTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-48*03  47   ........................C...........C.T...GTA.T...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  S  G  S  T  R  H  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  A  
                    Query_1249   91   AATGGATCTCATACATCAGTAGTAGTGGCAGTACCAGACATTACGCAGACTCTGTGAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  91.6% (228/249)  IGHV3-48*03  137  .G...G.T........T...........T.......T.T.C........................T........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  R  W  G  R  D  D  
                    Query_1249   181  AGAACTCACTATATTTGGAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGAGGCCGATGGGGAAGGGACGATT  270
V  91.6% (228/249)  IGHV3-48*03  227  ..........G...C..C..................C................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-3*01   6    ------------------------------------------------------------------------------------......  11

                                      IMGT--------------------->                                  
                                      F  W  D  G  V  R  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_1249   271  TTTGGGATGGGGTGAGGTTCGACTCTTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  330
D  100.0% (11/11)   IGHD3-3*01   12   .....-------------------------------------------------------  16
J  93.3% (42/45)    IGHJ5*01     7    ---------------..........C........A....C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_128571

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           394     7e-112
IGHD3-3*01                                                                                            12.2    35    
IGHJ1*01                                                                                              56.4    4e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGAGCAA	GAGTGG	CCGCCCAGTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGAGCAAGAGTGGCCGCCCAGTTC	ARDGARVAAQF	290	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	67	4	0	94.4
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	106	8	0	93
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	292	272	20	0	93.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  V  S  G  D  T  F  S  T  
                    Query_1250   6    TGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCCGGGTCCTCGGTGAGGGTCTCCTGCAAGGTCTCTGGAGACACCTTCAGCACCT  95
V  93.2% (272/292)  IGHV1-69*01  5    .....................................T.............A..............CT.......G...........G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  S  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  A  S  K  Y  A  
                    Query_1250   96   ATTCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCATCATCCCTATATTCGGTGCATCAAAGTACGCAC  185
V  93.2% (272/292)  IGHV1-69*01  95   ..G....................................................G...........C..T...A..G....C.......  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  A  S  T  V  N  M  E  L  S  S  L  R  S  E  D  T  
                    Query_1250   186  AGAAGTTCCAGGGCAGAGTCACGATAACCGCGGACGAATCCGCGAGCACAGTCAACATGGAGCTGAGTAGCCTGAGGTCTGAGGACACGG  275
V  93.2% (272/292)  IGHV1-69*01  185  .........................T...............A.........C.T.............C........A.............  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-----------CDR3-IMGT----------->                                  
                                      A  V  Y  Y  C  A  R  D  G  A  R  V  A  A  Q  F  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_1250   276  CCGTATATTACTGTGCGAGAGATGGAGCAAGAGTGGCCGCCCAGTTCTGGGGCCAGGGCACCCTGGTCAGCGTCTCGTCAG  356
V  93.2% (272/292)  IGHV1-69*01  275  ....G.................-----------------------------------------------------------  296
                                      A  V  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD3-3*01   16   ------------------------------......---------------------------------------------  21
J  94.3% (33/35)    IGHJ1*01     18   ----------------------------------------------.......................C......C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_128576

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           316     2e-88
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGCTCCCCCCTCAC	TATATCAATGGCTGG	GACT	TTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGCTCCCCCCTCACTATATCAATGGCTGGGACTTTTGGCTTC	ACSPLTISMAGTFGF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	221	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  T  P  G  K  E  L  E 
                    Query_1251   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATAAGTAGTTATTACTGGAACTGGATCCGGCAGACCCCAGGGAAGGAACTGGAG  90
V  92.1% (221/240)  IGHV4-59*08  49   ......................................C........C.......G.............C............G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  T  G  S  A  N  Y  N  P  S  L  K  S  R  V  S  M  S  V  D  S  S  K  N 
                    Query_1251   91   TGGATTGGGTATGTCTATTACACTGGGAGCGCCAACTACAACCCCTCCCTCAAGAGTCGAGTCAGCATGTCGGTGGACTCGTCCAAGAAT  180
V  92.1% (221/240)  IGHV4-59*08  139  ............A.........G.......A.................................C...A..A..A...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  S  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  C  S  P  L  T  I  S  M  A  G 
                    Query_1251   181  CAGTTCTCCCTGAGTCTGAGTTCTGTGACCGCCGCAGACACGGCCATCTATTACTGTGCGTGCTCCCCCCTCACTATATCAATGGCTGGG  270
V  92.1% (221/240)  IGHV4-59*08  229  .............AG.....C........................G.G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  86.7% (13/15)    IGHD6-19*01  4    --------------------------------------------------------------------------....G..G.......-  18

                                      ----------->                                  
                                       T  F  G  F  W  G  Q  G  S  L  V  R  V  S  S  
                    Query_1251   271  ACTTTTGGCTTCTGGGGCCAGGGATCCCTGGTCCGCGTCTCCTCAG  316
J  88.4% (38/43)    IGHJ4*02     6    ---....A..A.............A........AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_128577

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           336     1e-94
IGHD5-18*01                                                                                           12.2    31   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCCTTTCC	ATACATGTATGG	CCCTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCCTTTCCATACATGTATGGCCCTGGCTAC	ASFPYMYGPGY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	230	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  N  F  S  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1252   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGACTCAACTTTAGCGACTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (230/245)  IGHV3-23*01  47   ............................T...T...C.......AG............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  S  S  K  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  S  
                    Query_1252   91   AGTGGGTCTCAGGTATTAGTGGAAGTGGTAGTAGCAAATACTACGCAGACTCCGTGAAGGGCCGGTTCATCATCTCCAGAGACAATTCCA  180
V  93.9% (230/245)  IGHV3-23*01  137  ............C.........T......G......C................................C....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  A  D  D  T  A  F  Y  Y  C  A  S  F  P  Y  M  Y  G  P  
                    Query_1252   181  AGAACACGGTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCTTTTATTACTGTGCGTCCTTTCCATACATGTATGGCCCTG  270
V  93.9% (230/245)  IGHV3-23*01  227  ........C...............................G.........G.A............-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  83.3% (10/12)    IGHD5-18*01  5    -------------------------------------------------------------------------.....GC.....-----  16

                                      ---->                                  
                                      G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1252   271  GCTACTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  309
J  97.4% (37/38)    IGHJ4*02     11   -...........................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_128575

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     2e-95
IGHD3-10*01                                                                                           10.3    118  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_1253   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-21*01  47   ............................................AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  E  Y  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_1253   91   AGTGGGTCTCATCCATTAGTAGTACTAGTGAATACATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  93.6% (233/249)  IGHV3-21*01  137  ........................G....AGT........C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_1253   181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTT  270
V  93.6% (233/249)  IGHV3-21*01  227  ............A......A..............................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1253   271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_58465

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           311     4e-87
IGHD4-17*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACGTAGGG	ACGGTGACTAC	GGGGCGGGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACGTAGGGACGGTGACTACGGGGCGGGGTTTGAGTAC	ARERRDGDYGAGFEY	236	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	19	22	4	4	0	0	100
CDR1-IMGT	23	46	24	22	2	0	91.7
FR2-IMGT	47	97	51	50	1	0	98
CDR2-IMGT	98	121	24	22	2	0	91.7
FR3-IMGT	122	235	114	106	8	0	93
CDR3-IMGT (germline)	236	243	8	8	0	0	100
Total	N/A	N/A	225	212	13	0	94.2


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  L  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_1254   19   GTCTGGATTCACCTTAAGTAGATATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAATGGGTGGCAGTTATCTGGTATGA  108
V  94.2% (212/225)  IGHV3-33*01  72   ...............C.....C............................................G..............A........  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  N  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  E  S  K  N  M  L  H  L  Q  M  N
                    Query_1254   109  TGGAAATAATAAATACTATGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACGAGTCCAAGAACATGCTGCATCTGCAAATGAA  198
V  94.2% (212/225)  IGHV3-33*01  162  .....G.................................A..................A.T..........C....T.............  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------CDR3-IMGT----------------->        
                                        S  L  G  A  D  D  T  A  V  Y  Y  C  A  R  E  R  R  D  G  D  Y  G  A  G  F  E  Y  W  G  Q
                    Query_1254   199  CAGCCTGGGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAACGTAGGGACGGTGACTACGGGGCGGGGTTTGAGTACTGGGGCCA  288
V  94.2% (212/225)  IGHV3-33*01  252  .......A.......G...........G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (11/11)   IGHD4-17*01  6    -----------------------------------------------------...........--------------------------  16
J  97.7% (42/43)    IGHJ4*02     6    -------------------------------------------------------------------------.....C...........  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_1254   289  GGGAACCCTGGTCACCGTCTCCTCAG  314
J  97.7% (42/43)    IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_128579

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCGGCCGG	TTGTGGTAGTACCGGCTGCTATG	GAAAT	AACCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCGGCCGGTTGTGGTAGTACCGGCTGCTATGGAAATAACCGGTTCGACCCC	AREAAGCGSTGCYGNNRFDP	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_1255   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGCGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .............................................T...................................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  D  H  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1255   91   TGGATTGGGTATATCCATTACAGTGGGAGCACCGACCACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTTGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ...............T.................A..T...............................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  I  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  A  G  C  G  S  T  G 
                    Query_1255   181  CAGATCTCCCTGAAGGTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGAAGCGGCCGGTTGTGGTAGTACCGGC  270
V  95.1% (233/245)  IGHV4-59*01  229  ...T...........C...G...........................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.3% (21/23)    IGHD2-2*01   7    --------------------------------------------------------------------------....A........A..  22

                                      GT------------------------>                                  
                                       C  Y  G  N  N  R  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1255   271  TGCTATGGAAATAACCGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  91.3% (21/23)    IGHD2-2*01   23   .......------------------------------------------------------  29
J  98.0% (48/49)    IGHJ5*02     3    ------------...T.............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_58464

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            364     5e-103
IGHD1-26*01                                                                                           14.1    9.0   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCG	GTGGGAG	TCGCCCCCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATGCGGTGGGAGTCGCCCCCCACTTTGACTAC	ARDAVGVAPHFDY	269	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	41	4	0	91.1
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	154	27	26	1	0	96.3
FR3-IMGT	155	268	114	103	11	0	90.4
CDR3-IMGT (germline)	269	276	8	8	0	0	100
Total	N/A	N/A	275	254	21	0	92.4


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  L  V  S  R  N  G  A  A  W  N  W  I  R 
                    Query_1256   2    CTGGTGAAACCCACACAGACCCTCTCACTCACATGTGCCATCTCCGGGGACCTTGTCTCTAGGAACGGTGCTGCTTGGAATTGGATCAGG  91
V  92.4% (254/275)  IGHV6-1*01   31   ........G...T.G.................C..................AG.........C...A.............C.........  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  L  R  G  R 
                    Query_1256   92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATATTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTCTGAGAGGTCGA  181
V  92.4% (254/275)  IGHV6-1*01   121  .........................................C....................................G...A.A.....  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  I  I  S  P  D  T  S  N  N  L  F  S  L  H  L  N  S  V  T  P  E  D  T  A  M  Y  Y  C  A 
                    Query_1256   182  ATAATCATCAGCCCAGACACTTCCAACAACCTCTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTATGTATTACTGTGCA  271
V  92.4% (254/275)  IGHV6-1*01   211  ....C.....A.........A.....G....AG...........G..............................G..............  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      ------------CDR3-IMGT-------------->                                  
                                       R  D  A  V  G  V  A  P  H  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_1256   272  AGAGATGCGGTGGGAGTCGCCCCCCACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  341
V  92.4% (254/275)  IGHV6-1*01   301  .....-----------------------------------------------------------------  305
                                       R                                                                    
D  100.0% (7/7)     IGHD1-26*01  7    ---------.......------------------------------------------------------  13
J  97.8% (44/45)    IGHJ4*02     4    -------------------------.......................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_43299

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           357     1e-100
IGHD2-21*02                                                                                           10.3    120   
IGHJ6*02                                                                                              114     1e-29 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAAAA	GTGAC	CCGCAAAC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAAAAGTGACCCGCAAACACTACTACTACTACGGTATGGACGTC	ATKVTRKHYYYYGMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	24	0	0	100
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	24	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	228	228	0	0	100


Alignments

                                       <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                          A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  
                     Query_1257   14   GTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTA  103
V  100.0% (228/228)  IGHV3-23*01  65   ..........................................................................................  154
                                          A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                       ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                     Query_1257   104  GTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGC  193
V  100.0% (228/228)  IGHV3-23*01  155  ..........................................................................................  244
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                       -------------------------------------------><-------------------CDR3-IMGT-----------------
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  K  V  T  R  K  H  Y  Y  Y  Y  G  M  D  
                     Query_1257   194  AAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGACAAAAGTGACCCGCAAACACTACTACTACTACGGTATGGACG  283
V  100.0% (228/228)  IGHV3-23*01  245  ................................................------------------------------------------  292
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (5/5)      IGHD2-21*02  15   -----------------------------------------------------.....--------------------------------  19
J  100.0% (59/59)    IGHJ6*02     4    ------------------------------------------------------------------........................  27

                                       ->                                 
                                       V  W  G  Q  G  T  T  V  T  V  S  S 
                     Query_1257   284  TCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  100.0% (59/59)    IGHJ6*02     28   ...................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_261799

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	C	ACTATGATGGTAGTGGTTATT	CCGTG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACACTATGATGGTAGTGGTTATTCCGTGAACTGGTTCGACCCC	ARHYDGSGYSVNWFDP	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  N  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1258   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAATTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (230/243)  IGHV4-59*01  49   ...............................G........G..G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  F  K  N 
                    Query_1258   91   TGGATTGGCTATATCTATTACAGTGGAAGCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTTCAAGAAC  180
V  94.7% (230/243)  IGHV4-59*01  139  ........G.................G........C....................................G.........C.......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  D  G  S  G  Y  S  V 
                    Query_1258   181  CACTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGACACTATGATGGTAGTGGTTATTCCGTG  270
V  94.7% (230/243)  IGHV4-59*01  229  ..G................G...........................G............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.2% (20/21)    IGHD3-22*01  6    ----------------------------------------------------------------........A............-----  26

                                      -------------->                                  
                                       N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1258   271  AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (49/49)   IGHJ5*02     3    .................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_201861

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD1-1*01                                                                                            10.3    112  
IGHJ1*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TG	ACGAC	CTAA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGACGACCTAAAC	AKDDDLN	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  N  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1259   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATAACTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   .........................................AGC.G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  G  V  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1259   91   AGTGGGTCTCAACCATTAGTGGTAGTGGAGTTACCACATACTATGCAGACTCCGTAAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-23*01  137  ...........G.T..............T.G..G.........C...........G..................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  H  C  A  K  D  D  D  L  N  W  G  
                    Query_1259   181  AGAGCACGCTGTACCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTTTATCACTGCGCGAAAGATGACGACCTAAACTGGGGCC  270
V  92.8% (232/250)  IGHV3-23*01  227  ...A.........T..........................G...........A...T....T........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD1-1*01   13   ------------------------------------------------------------------------.....-------------  17
J  100.0% (36/36)   IGHJ1*01     17   ---------------------------------------------------------------------------------.........  25

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_1259   271  AGGGCACCCTGGTCACCGTCTCCTCAG  297
J  100.0% (36/36)   IGHJ1*01     26   ...........................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_261794

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD1-26*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCGA	TATACTGGGAGCTAC	CGAC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCGATATACTGGGAGCTACCGACATGCTTTTGATATC	ARFRYTGSYRHAFDI	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	227	15	0	93.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  T  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_1260   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTACTTATTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAAT  93
V  93.8% (227/242)  IGHV4-59*01  50   .....TCC...A....C.........................G...C.A.......................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      Y  I  G  Y  I  S  Y  S  G  S  T  D  Y  N  P  S  L  K  S  G  V  T  I  S  L  D  T  S  K  N  
                    Query_1260   94   ATATTGGGTATATCTCTTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTGGAGTCACCATATCACTAGACACGTCCAAGAACC  183
V  93.8% (227/242)  IGHV4-59*01  140  GG.............A................A.......................C..............G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  R  Y  T  G  S  Y  R  H  
                    Query_1260   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATTCCGATATACTGGGAGCTACCGACATG  273
V  93.8% (227/242)  IGHV4-59*01  230  ..............................................................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  93.3% (14/15)    IGHD1-26*01  3    --------------------------------------------------------------------....G..........-------  17
J  97.8% (44/45)    IGHJ3*02     3    ---------------------------------------------------------------------------------------...  5

                                      ---------->                               
                                      A  F  D  I  W  S  Q  G  T  M  V  T  V  S  
                    Query_1260   274  CTTTTGATATCTGGAGCCAAGGGACAATGGTCACCGTCTCTT  315
J  97.8% (44/45)    IGHJ3*02     6    ..............G...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_43293

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           372     2e-105
IGHD3-3*01                                                                                            39.1    3e-07 
IGHJ5*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCCATAC	TACGATTTTTGGAGTGGTTA	CCCAGGCCTCA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGATCCATACTACGATTTTTGGAGTGGTTACCCAGGCCTCACC	TTDPYYDFWSGYPGLT	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	247	9	0	96.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1261   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAATGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.5% (247/256)  IGHV3-15*01  47   .......T......................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  N  K  T  D  G  G  T  A  A  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_1261   91   AGTGGGTTGGCCGTATTAAAAACAAAACTGATGGTGGGACAGCAGCCTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  96.5% (247/256)  IGHV3-15*01  137  .....................G...................A...A............................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  R  N  T  V  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  D  P  Y  Y  D  
                    Query_1261   181  ATTCAAGAAACACGGTCTATTTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATCCATACTACGATT  270
V  96.5% (247/256)  IGHV3-15*01  227  ......A.......C.G...C.......................................................--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (20/20)   IGHD3-3*01   5    -----------------------------------------------------------------------------------.......  11

                                      R3-IMGT------------------>                                  
                                      F  W  S  G  Y  P  G  L  T  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_1261   271  TTTGGAGTGGTTACCCAGGCCTCACCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  330
D  100.0% (20/20)   IGHD3-3*01   12   .............-----------------------------------------------  24
J  97.2% (35/36)    IGHJ5*02     16   ------------------------...............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_261796

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           14.1    8.4  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TATGGGTC	ACTATGA	GGGGGG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATATGGGTCACTATGAGGGGGGTGATGCTTTTGATATT	ARDMGHYEGGDAFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	232	19	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_1262   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGGAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  92.4% (232/251)  IGHV4-61*01  49   ...............................................T....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       P  E  W  I  G  D  I  Y  Y  R  G  F  T  K  Y  N  P  S  L  R  S  R  V  S  I  S  V  D  T  S 
                    Query_1262   91   CCGGAGTGGATTGGGGATATCTATTACAGGGGGTTCACCAAGTATAACCCCTCCCTCAGGAGTCGAGTCTCCATATCAGTGGACACGTCC  180
V  92.4% (232/251)  IGHV4-61*01  139  .T.............T.............T...AG......C..C.............A..........A..........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  M  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  M  G  H  Y  E  G 
                    Query_1262   181  AAGAATCAGTTCTCCCTGACGATGAAGTCTGTGACCGCTGCGGACACGGCCGTATATTATTGTGCGAGAGATATGGGTCACTATGAGGGG  270
V  92.4% (232/251)  IGHV4-61*01  229  .....C.............A.C...GC..........................G.....C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-22*01  6    -------------------------------------------------------------------------------.......----  12

                                      ----------------->                                  
                                       G  D  A  F  D  I  W  G  Q  G  T  T  V  I  V  S  S  
                    Query_1262   271  GGTGATGCTTTTGATATTTGGGGCCAAGGGACTACGGTCATCGTCTCTTCAG  322
J  92.0% (46/50)    IGHJ3*02     1    --...............C..............A.T.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_43291

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           291     6e-81
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	213	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_1263   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  88.8% (213/240)  IGHV4-59*01  49   ..................A......................T.GT.A...C....G.............C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R 
                    Query_1263   91   TGGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGA  180
V  88.8% (213/240)  IGHV4-59*01  139  .......GG.....C.ATT................C..C...........C.....................G.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G 
                    Query_1263   181  CACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGT  270
V  88.8% (213/240)  IGHV4-59*01  229  ..G...........G....G............T..............G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-22*01  7    -----------------------------------------------------------------------------..........A..  19

                                      ----------------------->                                  
                                       G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1263   271  GGCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  328
D  93.3% (14/15)    IGHD3-22*01  20   ..--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    --------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_43296

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHD1-26*01                                                                                           10.3    124  
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	N/A	GGGAG	GTGAAACGCGAAAG	TTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGGAGGTGAAACGCGAAAGTTATTATTATTATTACGGCATGGACGTC	AKGEVKRESYYYYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  H  A  M  R  W  I  R  Q  A  P  G  K  G  L  
                    Query_1264   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTCAGTTCCCATGCCATGAGGTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-23*01  47   ....................................CC..T..CAG.T..........C...G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  D  V  S  V  S  G  G  R  T  L  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1264   91   AGTGGGTCTCAGATGTTAGTGTTAGTGGTGGAAGAACACTCTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  92.8% (231/249)  IGHV3-23*01  137  ............C.A......G.........T..C...TA.............................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  E  V  K  R  E  S  
                    Query_1264   181  AGAACACGCTGTATCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGGGGAGGTGAAACGCGAAAGTT  270
V  92.8% (231/249)  IGHV3-23*01  227  .........................C...........................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD1-26*01  9    ---------------------------------------------------------------------.....----------------  13
J  91.8% (56/61)    IGHJ6*02     2    ----------------------------------------------------------------------------------------..  3

                                      IMGT--------------------->                                 
                                      Y  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1264   271  ATTATTATTATTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  91.8% (56/61)    IGHJ6*02     4    .C..C..C..C.....T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_43297

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           346     2e-97
IGHD3-9*01                                                                                            35.3    4e-06
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATCCGC	GTATTACGATGTTTTGACTGG	CCAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATCCGCGTATTACGATGTTTTGACTGGCCATAACTGGTTCGACCCC	ARGSAYYDVLTGHNWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  L  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1265   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCATTCTCAGTAGTTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-48*03  47   ....................G...............CCT...................C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  V  R  G  T  T  I  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  H  A  
                    Query_1265   91   AGTGGGTTTCATACATTAGTGTTAGAGGTACTACCATATACTACGCAGACTCTGTGCAGGGCCGATTTACCATCTCTAGAGACCACGCCA  180
V  94.4% (235/249)  IGHV3-48*03  137  ....................AG...T....G.........................A..........C........C......A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      T  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  S  A  Y  Y  D  V  
                    Query_1265   181  CGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGATCCGCGTATTACGATGTTT  270
V  94.4% (235/249)  IGHV3-48*03  227  A....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.2% (20/21)    IGHD3-9*01   1    ----------------------------------------------------------------------------..........A...  14

                                      IMGT--------------------->                                  
                                      L  T  G  H  N  W  F  D  P  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_1265   271  TGACTGGCCATAACTGGTTCGACCCCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  330
D  95.2% (20/21)    IGHD3-9*01   15   .......-----------------------------------------------------  21
J  98.0% (48/49)    IGHJ5*02     3    -----------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_43294

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            439     2e-125
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	286	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_1266   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  98.3% (286/291)  IGHV1-2*04   6    ................................AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  E  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_1266   91   CTATATGCACTGGGAGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.3% (286/291)  IGHV1-2*04   96   ..............T...........................................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_1266   181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  98.3% (286/291)  IGHV1-2*04   186  ..........................................................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  F  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W  G  Q
                    Query_1266   271  CGTGTTTTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGGGGCCA  360
V  98.3% (286/291)  IGHV1-2*04   276  .....A..A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------------------....A...........................  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_1266   361  AGGGACCACGGTCACCGTCTCCTCA  385
J  98.2% (56/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_259098

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            276     2e-76
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	227	265	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
CDR1-IMGT	22	40	19	16	3	0	84.2
FR2-IMGT	41	91	51	48	3	0	94.1
CDR2-IMGT	92	112	21	19	2	0	90.5
FR3-IMGT	113	226	114	104	10	0	91.2
CDR3-IMGT (germline)	227	233	7	7	0	0	100
Total	N/A	N/A	212	194	18	0	91.5


Alignments

                                      <----CDR1-IMGT----><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----
                                        I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  Q  S  G  R  T
                    Query_1267   22   CATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTGGAGTGGATTGGGGAAATCTATCAGAGTGGGCGCAC  111
V  91.5% (194/212)  IGHV4-4*02   84   .......A..AG........GG.......................G................................T......A....  173
                                        I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T

                                      ><----------------------------------------------------FR3-IMGT----------------------------
                                        N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  K  N  E  L  S  L  N  L  K  S  V  T  A
                    Query_1267   112  CAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCAAGAATGAACTCTCCCTGAACCTGAAGTCTGTGACCGC  201
V  91.5% (194/212)  IGHV4-4*02   174  ............................G.......A....................CC.GT..........G....GC...........  263
                                        N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A

                                      ------------------------><--------------CDR3-IMGT-------------->                          
                                        A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G  W  L  D  S  W  G  Q  G  T  L  V  A  V
                    Query_1267   202  CGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGT  291
V  91.5% (194/212)  IGHV4-4*02   264  ...............G................----------------------------------------------------------  295
                                        A  D  T  A  V  Y  Y  C  A  R                                                            
D  100.0% (13/13)   IGHD6-19*01  6    ------------------------------------------.............-----------------------------------  18
J  95.0% (38/40)    IGHJ4*02     7    --------------------------------------------------------......A......................A....  40

                                            
                                        S  S
                    Query_1267   292  CTCCTC  297
J  95.0% (38/40)    IGHJ4*02     41   ......  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_259099

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           386     1e-109
IGHD3-10*01                                                                                           23.8    0.011 
IGHJ1*01                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TAACGGCG	GGTTCGGGGAGT	N/A	CTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAACGGCGGGTTCGGGGAGTCTGAATACTTCCAGCAC	ARHNGGFGESEYFQH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	249	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_1268   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  99.2% (249/251)  IGHV4-39*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  C  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1268   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACTGCCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  99.2% (249/251)  IGHV4-39*01  139  .............................................AA...........................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  N  G  G  F  G  E 
                    Query_1268   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATAACGGCGGGTTCGGGGAG  270
V  99.2% (249/251)  IGHV4-39*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD3-10*01  11   -------------------------------------------------------------------------------...........  21

                                      ----------------->                                  
                                       S  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1268   271  TCTGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (12/12)   IGHD3-10*01  22   .---------------------------------------------------  22
J  100.0% (51/51)   IGHJ1*01     2    -...................................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_259091

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ3*01                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATA	CTACAGGTCG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACAGGTCGTGATCCTTTTGATTTC	ARVSREYYDTTGRDPFDF	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1269   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1269   91   AGTGGGTGGCAGTTATTTGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  96.8% (241/249)  IGHV3-33*01  137  ................A.....................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_1269   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  96.8% (241/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  F  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_1269   271  CTACAGGTCGTGATCCTTTTGATTTCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
J  92.0% (46/50)    IGHJ3*01     1    ----------....G........G...................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_259092

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           339     2e-95
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	TTCCGCGAAAGTGG	GGAGTGGT	C	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGATTCCGCGAAAGTGGGGAGTGGTCTTGATATC	AGDSAKVGSGLDI	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	234	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  A  V  S  S  S  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_1270   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCGCCGTCAGCAGCAGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  93.2% (234/251)  IGHV4-61*01  49   .................................T..........TG...G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_1270   91   CTGGAATGGATTGGGTATATCTACTACGGTGGAGACACCAAGTACAACCCCTCCCTCAAGAGTCGCGTCACCATATCATTAGACACGTCC  180
V  93.2% (234/251)  IGHV4-61*01  139  .....G.................T...A....GAG......C.......................A............G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  S  S  V  A  A  A  D  T  A  V  Y  Y  C  A  G  D  S  A  K  V  G  S 
                    Query_1270   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGGCCGCTGCGGACACGGCCGTCTATTACTGTGCGGGAGATTCCGCGAAAGTGGGGAGT  270
V  93.2% (234/251)  IGHV4-61*01  229  .................................A...................G............A....-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-3*01   15   -------------------------------------------------------------------------------------.....  19

                                      ----------->                                  
                                       G  L  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_1270   271  GGTCTTGATATCTGGGGCCAAGGGACAATGGTCATCGTCTCTTCAG  316
D  100.0% (8/8)     IGHD3-3*01   20   ...-------------------------------------------  22
J  97.6% (41/42)    IGHJ3*02     9    ----..............................C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_259094

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         360     1e-101
IGHD2-2*02                                                                                            37.2    1e-06 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGAG	TCCCCTCGGC	TGTAGTAGTACCAGCTTCTATA	GC	CTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCGGAGTCCCCTCGGCTGTAGTAGTACCAGCTTCTATAGCCTTTAACTCC	AGVPSAVVVPASIAFNS	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  A  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_1271     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCGCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-4*01  49   ..................A..............T...............A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  H  I  Y  Y  N  G  R  T  Y  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_1271     91   CTGGAGTGGATTGGGCACATCTATTACAATGGGAGGACCTACTACAACCCGTCCCTCAAGAGTCGAGTTTCCATATCAGTAGACACGTCC  180
V  96.0% (240/250)  IGHV4-30-4*01  139  ...............T............G......C.................................A....................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  V  P  S  A  V  V  V 
                    Query_1271     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCTGACACGGCCGTCTATTACTGTGCCGGAGTCCCCTCGGCTGTAGTAGTA  270
V  96.0% (240/250)  IGHV4-30-4*01  229  .........................................A...........G............A...--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.5% (21/22)    IGHD2-2*02     8    --------------------------------------------------------------------------------..........  17

                                        MGT-------------------->                                  
                                         P  A  S  I  A  F  N  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1271     271  CCAGCTTCTATAGCCTTTAACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.5% (21/22)    IGHD2-2*02     18   ......G.....----------------------------------------------  29
J  95.5% (42/44)    IGHJ4*02       5    --------------....G...A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_259096

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           321     6e-90
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_1272   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_1272   91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_1272   181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.8% (225/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_1272   271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_259097

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         333     1e-93
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGCACTAT	TATGCTAGCAGTGGTTATT	T	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGCACTATTATGCTAGCAGTGGTTATTTCTACTTTGACTAC	ARGHYYASSGYFYFDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_1273     4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  93.1% (230/247)  IGHV4-30-4*01  50   .....TCC...A....CA..............................A.........................................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  V  G  R  I  Y  Y  N  G  R  T  Y  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_1273     94   TGGAGTGGGTTGGGCGCATCTATTACAATGGGAGGACCTATTACAGCCCGTCCCTCAAGAGTCGAGTTACCATATCAGTGGACACGTCCA  183
V  93.1% (230/247)  IGHV4-30-4*01  140  ........A.....TA...........G......C.....C....A.................................A..........  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                        K  N  Q  F  S  L  M  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  Y  Y  A  S  S  
                    Query_1273     184  AGAACCAGTTCTCCCTGATGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTTCTGTGCCAGGGGGCACTATTATGCTAGCAGTG  273
V  93.1% (230/247)  IGHV4-30-4*01  230  ..................A......................................A.........-----------------------  296
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  89.5% (17/19)    IGHD3-22*01    8    -----------------------------------------------------------------------------....A...T....  20

                                        T------------------>                                  
                                        G  Y  F  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1273     274  GTTATTTCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  89.5% (17/19)    IGHD3-22*01    21   ......------------------------------------------------  26
J  100.0% (47/47)   IGHJ4*02       2    -------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_258329

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           438     5e-125
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ACCCTCGG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTCGGTGCTCTTGATATC	ARTLGALDI	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	284	4	0	98.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_1274   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTAT  91
V  98.6% (284/288)  IGHV1-18*01  7    ..........................................................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_1274   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAATTATGCACAG  181
V  98.6% (284/288)  IGHV1-18*01  97   ...................................G.........................C..................C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_1274   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  98.6% (284/288)  IGHV1-18*01  187  ...C......................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------CDR3-IMGT-------->                                  
                                       V  Y  Y  C  A  R  T  L  G  A  L  D  I  W  G  Q  G  A  M  V  T  V  S  S  
                    Query_1274   272  GTGTATTACTGTGCGAGAACCCTCGGTGCTCTTGATATCTGGGGCCAAGGGGCAATGGTCACCGTCTCTTCAG  344
V  98.6% (284/288)  IGHV1-18*01  277  ..................-------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                        
J  95.7% (45/47)    IGHJ3*02     4    --------------------------....T....................A.....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_330742

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            316     2e-88
IGHD6-19*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATCGAACAT	CAGTGGGTGG	AATACACGCTT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATCGAACATCAGTGGGTGGAATACACGCTTTGGACGTC	ARYRTSVGGIHALDV	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	224	22	0	91.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  T  N  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_1275   1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGCCTCCATCAGCAGTACTAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.1% (224/246)  IGHV4-4*02   49   .......................C.......G..............G...........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  N  A  N  L  N  P  S  L  R  S  R  L  S  I  S  V  D  R  S  K 
                    Query_1275   91   GAGTGGATTGGAGAAATATATCATAGTGGGAATGCCAACCTCAACCCGTCCCTCAGGAGTCGTCTTAGCATCTCAGTAGACAGGTCCAAG  180
V  91.1% (224/246)  IGHV4-4*02   139  ...........G.....C.............GCA.....TA..............A......AG.C.C...A..........A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  R  T  S  V  G  G  I 
                    Query_1275   181  AACCAATTCTCCCTGAAGCTGAGTTCTGTGACCGCCGCGGACACGGCCGTTTATTATTGTGCGAGATATCGAACATCAGTGGGTGGAATA  270
V  91.1% (224/246)  IGHV4-4*02   229  .....G.................C..........................G.....C.........------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  90.0% (9/10)     IGHD6-19*01  9    ----------------------------------------------------------------------------......C...----  18

                                      -------------->                                 
                                       H  A  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1275   271  CACGCTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  100.0% (41/41)   IGHJ6*02     22   -------.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_240188

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           406     1e-115
IGHD1-26*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GAGTTCCCCCAGC	GGGAGCTACT	CC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGACAGGAGTTCCCCCAGCGGGAGCTACTCCCTACTACGGTATGGATGTC	TTGVPPAGATPYYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	5	2	0	71.4
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  R  F
                    Query_1276   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGATT  90
V  94.8% (275/290)  IGHV1-69*01  6    .......................................................................................C.A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  Q  W  M  G  S  I  I  P  I  F  G  T  A  N  Y  A  Q
                    Query_1276   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTCAGTGGATGGGAAGCATCATCCCTATCTTTGGTACAGCAAACTACGCACA  180
V  94.8% (275/290)  IGHV1-69*01  96   ........................................G...........G.G...................................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  L  T  A  V  E  S  T  S  T  A  Y  M  E  L  S  S  L  K  S  E  D  T  A
                    Query_1276   181  GAGGTTCCAGGGCAGAGTCACACTTACCGCGGTCGAGTCCACGAGCACAGCCTACATGGAACTGAGCAGCCTGAAATCTGAGGACACGGC  270
V  94.8% (275/290)  IGHV1-69*01  186  ..A..................GA.........A...A.......................G.............G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  F  Y  C  T  T  G  V  P  P  A  G  A  T  P  Y  Y  G  M  D  V  W  G  Q  G  T  A  V  T  V
                    Query_1276   271  CGTGTTTTACTGTACGACAGGAGTTCCCCCAGCGGGAGCTACTCCCTACTACGGTATGGATGTCTGGGGCCAAGGGACCGCGGTCACCGT  360
V  94.8% (275/290)  IGHV1-69*01  276  .....A.......G...G..----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD1-26*01  9    ---------------------------------..........-----------------------------------------------  18
J  96.2% (50/52)    IGHJ6*02     11   ---------------------------------------------...............C..................A..........  55

                                             
                                        S  S 
                    Query_1276   361  CTCCTCA  367
J  96.2% (50/52)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_247823

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           276     3e-76
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGC	GGTATAGTAGTGG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGCGGTATAGTAGTGGCTACTACTACGCTATGGTCGTC	ARPRYSSGYYYAMVV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	95	19	0	83.3
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	212	36	0	85.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  G  D  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1277   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCGGCGACTTTGGCATGCACTGGGTCCGCCAGGCCCCTGGCAAGGGGCTGG  90
V  85.5% (212/248)  IGHV3-30*03  47   ....................................C....A.TAG..A........................T..A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  G  A  I  S  Y  D  G  K  Y  K  F  Y  R  D  S  L  K  G  R  F  A  I  S  R  D  N  F  
                    Query_1277   91   AGTGGGTAGGAGCTATCTCATATGACGGCAAATATAAATTCTATAGAGACTCTCTGAAGGGCCGCTTCGCCATCTCCAGAGACAACTTCG  180
V  85.5% (212/248)  IGHV3-30*03  137  .......G.C..T...A........T..A.GTA......A....GC......CG..........A...A................T.C.A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  K  T  V  F  L  E  M  K  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  P  R  Y  S  S  G  Y  
                    Query_1277   181  AGAAGACAGTGTTTCTGGAAATGAAGAGTCTGAGACCTGAGGACACGGCTGTCTATTACTGTGCGAGACCGCGGTATAGTAGTGGCTACT  270
V  85.5% (212/248)  IGHV3-30*03  227  ....C..GC...A....C.......C..C......G................G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD6-19*01  2    ------------------------------------------------------------------------.......C.....-----  14
J  96.4% (53/55)    IGHJ6*02     8    -------------------------------------------------------------------------------------.....  12

                                      ---------------->                                 
                                      Y  Y  A  M  V  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1277   271  ACTACGCTATGGTCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  96.4% (53/55)    IGHJ6*02     13   ......G.....A.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_258321

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           343     2e-96
IGHD5-12*01                                                                                           12.2    37   
IGHJ4*02                                                                                              52.6    6e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCGGATTTTCCTCTGATGGAC	GTGAATATA	TGACCCCGCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCGGATTTTCCTCTGATGGACGTGAATATATGACCCCGCTCTTTGACTTT	ARAGFSSDGREYMTPLFDF	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	63	6	0	91.3
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	253	34	0	88.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I  N  F 
                    Query_1278   2    CAGCTGGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGACGATCTCTTGCCAGGCTTCCGGTTACAGCTTTATCAACTTC  91
V  88.2% (253/287)  IGHV1-18*04  7    .......................G.........................A.G....C...A.......T.......C.....C..G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  A  H  R  G  D  T  K  Y  A  Q 
                    Query_1278   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTCGAATGGCTGGGATGGATCAGCGCGCACAGAGGTGACACAAAATATGCACAG  181
V  88.2% (253/287)  IGHV1-18*04  97   ................................A.....T..G...A................TT...AT...A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  F  L  D  V  R  S  L  R  S  D  D  T  A 
                    Query_1278   182  AGTTTCCAGGGCAGAGTCACCATGACCACAGACACACTCACGGGAACAGCGTTCCTGGACGTGAGGAGCCTGCGATCTGACGACACGGCC  271
V  88.2% (253/287)  IGHV1-18*04  187  .AGC................................TC....A.C.....C.A.A....GC...........A.................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  A  R  A  G  F  S  S  D  G  R  E  Y  M  T  P  L  F  D  F  W  G  Q  G  T  P  V 
                    Query_1278   272  GTTTATTACTGTGCGAGGGCCGGATTTTCCTCTGATGGACGTGAATATATGACCCCGCTCTTTGACTTTTGGGGCCAGGGAACCCCGGTC  361
V  88.2% (253/287)  IGHV1-18*04  277  ..G..............-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  88.9% (8/9)      IGHD5-12*01  1    ----------------------------------------...G.....-----------------------------------------  9
J  89.7% (35/39)    IGHJ4*02     5    -----------------------------------------------------------........AC................T....  35

                                              
                                       S  V  S
                    Query_1278   362  TCCGTCTC  369
J  89.7% (35/39)    IGHJ4*02     36   A.......  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_258320

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           286     1e-79
IGHD6-19*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGGGCAAG	ATAGTAGTGGCTGG	GGCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGAAGGGCAAGATAGTAGTGGCTGGGGCTACTACTTTGACACC	VREGQDSSGWGYYFDT	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	217	34	0	86.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  V  N  S  G  F  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_1279   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGGTCCGTCAATAGTGGTTTTTATTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  86.5% (217/251)  IGHV4-61*01  49   ...................C............C.......GC......AG...C..C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  D  W  I  G  N  V  Y  A  T  G  R  T  K  L  K  S  S  L  T  S  R  V  S  M  S  V  D  K  A 
                    Query_1279   91   CTGGACTGGATTGGCAATGTCTATGCCACTGGGAGAACCAAATTGAAGTCCTCCCTCACGAGTCGAGTCAGCATGTCCGTAGACAAGGCC  180
V  86.5% (217/251)  IGHV4-61*01  139  .....G........GT..A.....TA..G......C.....C.AC..CC.........A...........C...A..A.......C.T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  L  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  V  R  E  G  Q  D  S  S  G 
                    Query_1279   181  AAGAACCTGTTCTCCCTGAAACTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTTTTGTGTGCGAGAAGGGCAAGATAGTAGTGGC  270
V  86.5% (217/251)  IGHV4-61*01  229  .......A............G....G................................AC....C.A....-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD6-19*01  5    -------------------------------------------------------------------------------....C......  15

                                      GT------------------>                                  
                                       W  G  Y  Y  F  D  T  W  G  P  G  T  L  V  T  V  S  S  
                    Query_1279   271  TGGGGCTACTACTTTGACACCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  325
D  92.9% (13/14)    IGHD6-19*01  16   ...----------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*02     1    -------...........TA........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_258322

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           319     2e-89
IGHD3-22*01                                                                                           14.1    8.5  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TATGGGTC	ACTATGA	GGGGGG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATATGGGTCACTATGAGGGGGGTGATGCTTTTGATATT	ARDMGHYEGGDAFDI	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	102	12	0	89.5
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  S  G  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_1280   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGGAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  90.8% (227/250)  IGHV4-61*01  50   .....TCC...A..................................T....A......................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      P  E  W  I  G  D  I  Y  Y  R  G  F  T  K  Y  N  P  S  L  R  S  R  V  S  I  S  V  D  T  S  
                    Query_1280   94   CGGAGTGGATTGGGGATATCTATTACAGGGGGTTCACCAAGTATAACCCCTCCCTCAGGAGTCGAGTCTCCATATCAGTGGACACGTCCA  183
V  90.8% (227/250)  IGHV4-61*01  140  T.............T.............T...AG......C..C.............A..........A..........A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  T  M  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  M  G  H  Y  E  G  
                    Query_1280   184  AGAATCAGTTCTCCCTGACGATGAAGTCTGTGACCGCTGCGGACACGGCCGTATATTATTGTGCGAGAGATATGGGTCACTATGAGGGGG  273
V  90.8% (227/250)  IGHV4-61*01  230  ....C.............A.C...GC..........................G.....C...........--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-22*01  6    ------------------------------------------------------------------------------.......-----  12

                                      ---------------->                                  
                                      G  D  A  F  D  I  W  G  Q  G  T  T  V  I  V  S  S  
                    Query_1280   274  GTGATGCTTTTGATATTTGGGGCCAAGGGACTACGGTCATCGTCTCTTCAG  324
J  92.0% (46/50)    IGHJ3*02     1    -...............C..............A.T.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_258325

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           382     4e-108
IGHD3-10*01                                                                                           12.2    35    
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCCAGC	GGGAGT	GAAAAGTTAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGCAGATCCAGCGGGAGTGAAAAGTTAATTGACTCT	GRSSGSEKLIDS	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	4	2	0	66.7
Total	N/A	N/A	288	266	22	0	92.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  E  A  S  G  Y  T  F  S  N  Y 
                    Query_1281   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAAGTCTCCTGCGAGGCTTCTGGTTACACCTTTAGCAACTAC  91
V  92.4% (266/288)  IGHV1-18*04  7    ..................................................G.........A.....................C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       E  I  S  W  V  R  Q  A  R  G  Q  G  L  E  W  M  G  C  I  S  G  Y  S  G  D  T  E  Y  A  Y 
                    Query_1281   92   GAAATCAGCTGGGTGCGACAGGCCCGTGGACAAGGGCTTGAGTGGATGGGATGCATCAGCGGTTACAGTGGTGACACAGAGTATGCATAC  181
V  92.4% (266/288)  IGHV1-18*04  97   .GT......................C...........................G.......C.....A....A.....A.C......C.G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       Q  F  R  G  R  V  T  M  T  T  D  T  S  A  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_1281   182  CAATTCCGGGGCAGAGTCACCATGACCACAGACACATCCGCGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.4% (266/288)  IGHV1-18*04  187  A.GC...A...............................A..................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  G  R  S  S  G  S  E  K  L  I  D  S  W  G  R  G  T  L  V  T  V  S  S  
                    Query_1281   272  GTGTATTACTGTGGCAGATCCAGCGGGAGTGAAAAGTTAATTGACTCTTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.4% (266/288)  IGHV1-18*04  277  .............CG...----------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD3-10*01  17   ------------------------......----------------------------------------------------  22
J  92.9% (39/42)    IGHJ4*02     7    ----------------------------------------......AC.......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_247820

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           333     1e-93
IGHD2-2*01                                                                                            37.2    1e-06
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CACCC	TATTGTAGTAGTAGTAGCTGCTATG	TGGGATC	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACCCTATTGTAGTAGTAGTAGCTGCTATGTGGGATCCTACCACTACGGTATGGACGTC	ARAPYCSSSSCYVGSYHYGMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  G  M  N  W  V  R  Q  A  A  G  K  G  L  
                    Query_1282   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGGTTCACGTTCAGTGACTATGGAATGAACTGGGTCCGCCAGGCTGCAGGCAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-33*01  47   ...............................A.....C......AG......C...C.................C...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  T  P  T  Y  Y  A  D  P  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1282   91   AGTGGGTAGCGATTATCTGGTATGATGGAACTCCTACATACTATGCAGACCCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (231/249)  IGHV3-33*01  137  .......G..AG....A.............G.AA..A.............T.......................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  P  Y  C  S  S  S  
                    Query_1282   181  AGAACACGCTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGAGCACCCTATTGTAGTAGTAGTA  270
V  92.8% (231/249)  IGHV3-33*01  227  .................C........................................C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.0% (23/25)    IGHD2-2*01   5    --------------------------------------------------------------------------.............CC.  20

                                      -CDR3-IMGT--------------------------->                                 
                                      S  C  Y  V  G  S  Y  H  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1282   271  GCTGCTATGTGGGATCCTACCACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  92.0% (23/25)    IGHD2-2*01   21   .........--------------------------------------------------------------  29
J  98.2% (54/55)    IGHJ6*02     8    ----------------....T..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_258327

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           293     2e-81
IGHD3-10*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGGAGGGGGCTTCGGGACAG	TATTATAAC	GGACGGCGGGGGAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGGAGGGGGCTTCGGGACAGTATTATAACGGACGGCGGGGGATTATGGACGTC	ARLEGASGQYYNGRRGIMDV	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	104	10	0	91.2
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	217	30	0	87.9


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  G  S  I  R  G  T  T  Y  Y  W  A  W  I  R  Q  P  P  G  K  G  
                    Query_1283   4    CCCTGAGACTCTCCTGTAGTGTCTCTGGTGGCTCCATCAGAGGGACTACTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  87.9% (217/247)  IGHV4-39*01  50   .....TCC...A....C.C.....................CA.T.G..G...........G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  T  V  R  Y  P  G  S  T  Y  Y  K  P  S  L  K  S  R  L  T  I  S  I  D  T  S  
                    Query_1283   94   TGGAATGGATTGGGACTGTTCGTTATCCTGGGAGCACCTATTACAAGCCGTCTCTCAAGAGTCGACTCACCATTTCCATAGACACGTCCA  183
V  87.9% (217/247)  IGHV4-39*01  140  ....G..........G.A.CTA....AG............C.....C.....C............G.......A...G............  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  N  L  G  S  V  T  A  A  D  T  S  V  Y  Y  C  A  R  L  E  G  A  S  G  Q  
                    Query_1283   184  AGAACCAGTTCTCCCTGAACCTGGGGTCTGTGACCGCCGCAGACACGTCTGTGTATTACTGTGCGAGGCTGGAGGGGGCTTCGGGACAGT  273
V  87.9% (217/247)  IGHV4-39*01  230  ...................G...A.C.....................G...................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD3-10*01  23   -----------------------------------------------------------------------------------------.  23

                                      R3-IMGT------------------------>                                 
                                      Y  Y  N  G  R  R  G  I  M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_1283   274  ATTATAACGGACGGCGGGGGATTATGGACGTCTGGGGCCAAGGGGCCACGGTCACCGTCTCCTCA  338
D  100.0% (9/9)     IGHD3-10*01  24   ........---------------------------------------------------------  31
J  97.7% (42/43)    IGHJ6*02     20   ----------------------......................A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_258326

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     9e-121
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	73	1	0	98.6
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	111	3	0	97.4
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	295	283	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  
                    Query_1284   4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTTCCA  93
V  95.9% (283/295)  IGHV5-51*01  2    ..G...............................................................................C...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  
                    Query_1284   94   CTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACA  183
V  95.9% (283/295)  IGHV5-51*01  92   GC..C.......G.................................................T.................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_1284   184  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  95.9% (283/295)  IGHV5-51*01  182  ...........C.....................C........................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  
                    Query_1284   274  CCGCCATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  363
V  95.9% (283/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  85.7% (12/14)    IGHD1-26*01  4    ---------------------------------...G....A.....-------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------------......TA................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_1284   364  CGGTCACCGTCTCGTCA  380
J  94.7% (54/57)    IGHJ6*02     46   .............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_330747

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           304     1e-84
IGHD2-2*01                                                                                            12.2    33   
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	TTCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGATTCAGCACCAGCGCATACTACTTTGACTGC	ARFSTSAYYFDC	261	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	19	5	0	79.2
FR2-IMGT	75	125	51	43	8	0	84.3
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	97	17	0	85.1
CDR3-IMGT (germline)	261	266	6	5	1	0	83.3
Total	N/A	N/A	266	230	36	0	86.5


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  
                    Query_1285   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATAAGTGGTTACCAGTGGAGCTGGCTCCGAC  90
V  86.5% (230/266)  IGHV4-59*01  26   ................T.......................................T....C...A.....T.C.........A....G.  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  H  P  G  K  G  L  E  W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  A  T  
                    Query_1285   91   AACACCCAGGAAAGGGACTGGAGTGGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGCCACCA  180
V  86.5% (230/266)  IGHV4-59*01  116  .G.C......G...................GGT....C...........G.G..C...C................A..G.....T.....  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      M  S  F  D  T  S  K  R  Q  F  S  L  R  L  E  S  V  T  A  A  D  S  A  V  Y  Y  F  A  R  F  
                    Query_1285   181  TGTCCTTTGACACGTCCAAGAGGCAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACTCGGCCGTCTATTACTTTGCGCGATTCA  270
V  86.5% (230/266)  IGHV4-59*01  206  .A..AG.A.............AC.............A....AGC..................A.......G.......G....A..----  291
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      ----CDR3-IMGT------------>                                
                                      S  T  S  A  Y  Y  F  D  C  W  G  R  G  T  L  V  V  V  S  S
                    Query_1285   271  GCACCAGCGCATACTACTTTGACTGCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  328
D  100.0% (6/6)     IGHD2-2*01   17   --......--------------------------------------------------  22
J  91.3% (42/46)    IGHJ4*02     1    ------------............A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_220942

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           355     3e-100
IGHD2-15*01                                                                                           12.2    34    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCAACC	GGTAGC	GCTAG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAACCGGTAGCGCTAGCTAC	STGSASY	284	304	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	101	13	0	88.6
Total	N/A	N/A	283	255	28	0	90.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  A  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  N  F  A  N  Y
                    Query_1286   1    GCAGCTGGTGCAGTCTGGAGCAGCGGTGAAAAAGCCCGGGGAGTCTCTGAAGATTTCCTGTAAGGGCTCTGGATACAACTTTGCCAATTA  90
V  90.1% (255/283)  IGHV5-51*01  6    .......................A..............................C...........T..........G....A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  L  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  N  L  G  N  Y  D  T  R  Y  R  A
                    Query_1286   91   CTGGCTTGGCTGGGTGCGCCAGATGCCCGGGAAGGGCCTGGAGTGGATGGGGATCATTAATCTTGGTAACTATGATACCAGATACAGAGC  180
V  90.1% (255/283)  IGHV5-51*01  96   ....A.C..........................A.......................CT...C....G...C...............CC.  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  D  L  V  T  I  S  A  D  K  S  I  D  T  V  Y  L  Q  W  A  S  L  K  A  S  D  T  A
                    Query_1286   181  GCCCTTCCAAGACCTGGTCACCATCTCAGCCGACAAATCCATCGACACCGTCTACCTCCAGTGGGCCAGCCTGAAGGCCTCGGACACCGC  270
V  90.1% (255/283)  IGHV5-51*01  186  .T.........G..A.....................G......AG.....C......G......AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----CDR3-IMGT----->                                  
                                        I  Y  Y  C  S  T  G  S  A  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1286   271  CATATATTACTGTTCAACCGGTAGCGCTAGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  338
V  90.1% (255/283)  IGHV5-51*01  276  ...G.........-------------------------------------------------------  288
                                        M  Y  Y  C                                                        
D  100.0% (6/6)     IGHD2-15*01  17   -------------------......-------------------------------------------  22
J  100.0% (38/38)   IGHJ4*02     11   ------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_220943

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           372     2e-105
IGHD6-13*01                                                                                           14.1    8.0   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGA	ATAGCAG	GAATC	TTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGAATAGCAGGAATCTTGAATTC	AKNSRNLEF	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	242	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  P  P  G  K  G  L  
                    Query_1287   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  98.4% (242/246)  IGHV3-48*03  47   .......................................................................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  F  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_1287   91   AGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATTCTACGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  98.4% (242/246)  IGHV3-48*03  137  .......................................A...............................A..................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  N  S  R  N  L  E  F  
                    Query_1287   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAAGAATAGCAGGAATCTTGAATTCT  270
V  98.4% (242/246)  IGHV3-48*03  227  ............A.....................................................------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD6-13*01  5    ---------------------------------------------------------------------.......--------------  11
J  92.9% (39/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------....C.A..  15

                                                                       
                                      W  G  Q  G  T  L  V  P  V  S  S  
                    Query_1287   271  GGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  303
J  92.9% (39/42)    IGHJ4*02     16   ....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_220940

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           318     5e-89
IGHJ3*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_1288   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  S  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_1288   91   TGGATTGCGTATTCCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.4% (224/245)  IGHV4-59*02  139  .......G....AT..A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_1288   181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.4% (224/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  84.0% (42/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  I  M  V  T  V  S  S  
                    Query_1288   271  GGCCCGGGGATAATGGTTACCGTGTCTTCAG  301
J  84.0% (42/50)    IGHJ3*02     20   ....AA....C......C.....C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_220941

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           352     3e-99
IGHD1-26*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GAG	GTGGGAG	T	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGAGGTGGGAGTTACTACTACGCCATGGACGTC	ARGGGSYYYAMDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  H  W  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_1289   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAGTCATTGGATGCACTGGGTCCGCCAAGCTCCAGGGAGGGGGCTGG  90
V  95.2% (237/249)  IGHV3-74*01  47   ...........................................T..CT.C...............................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  H  T  D  G  S  S  T  S  Y  V  D  S  V  K  G  R  F  T  V  S  R  D  N  G  
                    Query_1289   91   TGTGGGTCTCACGTATTCACACTGATGGGAGTAGCACAAGCTATGTGGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGGCA  180
V  95.2% (237/249)  IGHV3-74*01  137  .................A.T.G.....................C.C.........................A...............C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  G  S  Y  Y  Y  
                    Query_1289   181  AGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGGAGGTGGGAGTTACTACTACG  270
V  95.2% (237/249)  IGHV3-74*01  227  .....................................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  7    ------------------------------------------------------------------------.......-----------  13
J  96.3% (52/54)    IGHJ6*02     9    --------------------------------------------------------------------------------..........  18

                                      ---------->                                 
                                      A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1289   271  CCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  96.3% (52/54)    IGHJ6*02     19   GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_220946

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         402     3e-114
IGHD1-26*01                                                                                           16.1    2.4   
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GAGGGGCC	TAGTGGGA	CGAG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGCCTAGTGGGACGAGCTGGTTCGGCCCC	AREGPSGTSWFGP	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  N  F  I  D  Y
                    Query_1290     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGCTCTGGATACAATTTTATCGACTA  90
V  94.5% (273/289)  IGHV5-10-1*01  6    ..................................................................T..........GC....C.AG...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  L  Y  S  P
                    Query_1290     91   CTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCCTTTACAGCCC  180
V  94.5% (273/289)  IGHV5-10-1*01  96   ........G......................................................................AAC........  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  P  I  S  V  D  K  S  I  S  P  A  Y  L  L  W  S  G  L  K  A  S  D  T  A
                    Query_1290     181  GTCCTTCCAAGGCCACGTCCCCATCTCAGTTGACAAGTCCATCAGCCCTGCCTACCTACTGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (273/289)  IGHV5-10-1*01  186  ...................A.........C................A..........G.A.......A......................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          M  Y  Y  C  A  R  E  G  P  S  G  T  S  W  F  G  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1290     271  CATGTATTACTGTGCGAGAGAGGGGCCTAGTGGGACGAGCTGGTTCGGCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  94.5% (273/289)  IGHV5-10-1*01  276  ...................-------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD1-26*01    5    ---------------------------........---------------------------------------------------  12
J  97.9% (46/47)    IGHJ5*02       5    ---------------------------------------........A......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_220947

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            294     6e-82
IGHD2-21*01                                                                                           12.2    31   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	TGGTGA	AGTATTCCTTGGATC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGGTGAAGTATTCCTTGGATCACTTTGACCAC	ARLVKYSLDHFDH	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	21	8	0	72.4
CDR1-IMGT	30	56	27	20	7	0	74.1
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  S  V  S  G  D  S  I  T  N  D  H  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_1291   1    GGTCCCTGAGACTCTCCTGTAGTGTCTCTGGTGACTCCATTACCAATGATCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  87.9% (218/248)  IGHV4-4*02   47   ..A.....TCC...A....CGC...........G......C.G..G.AG.A.......................................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  R  S  G  S  T  T  Y  N  P  S  L  Q  S  R  V  A  F  S  V  D  K  S  
                    Query_1291   91   TGGAGTGGATTGGAGAAATCTATCGTAGTGGGAGCACCACTTACAACCCGTCCCTTCAGAGTCGAGTCGCCTTCTCAGTAGACAAGTCCA  180
V  87.9% (218/248)  IGHV4-4*02   137  .............G..........A..............AC..............CA...........A..A.A................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  Q  F  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  V  K  Y  S  L  D  
                    Query_1291   181  AGAACCAGTTCTCCCTGAGTCTGAGATCTGTGACCGCCGCCGATACGGCCGTATATTACTGTGCGAGATTGGTGAAGTATTCCTTGGATC  270
V  87.9% (218/248)  IGHV4-4*02   227  ..................AG.....C..............G..C........G...............----------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*01  13   ---------------------------------------------------------------------......---------------  18

                                      ---------->                                  
                                      H  F  D  H  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_1291   271  ACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  315
J  95.6% (43/45)    IGHJ4*02     4    ........T................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_220944

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           324     8e-91
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAG	GTCGAGGGAG	TGACTACGGT	AGACT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGGTCGAGGGAGTGACTACGGTAGACTCTACTTTGACTAC	AKGRGSDYGRLYFDY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	101	51	43	5	3	84.3
CDR2-IMGT	102	125	24	19	5	0	79.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	249	230	16	3	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  I  N  W  V  R  R  A  P  G  K  G  L  
                    Query_1292   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATGCCATCAACTGGGTCCGCCGGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-23*01  47   ...........................................C.G.........G.G...........A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S     M  I  G  G  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1292   91   AATGGATCTCA---ATGATTGGTGGTGGTGGAACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  177
V  92.4% (230/249)  IGHV3-23*01  137  .G...G.....GCT..T.G....A.......T.G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  G  R  G  S  D  Y  G  
                    Query_1292   178  AGAACACCCTGTATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCCAAAGGTCGAGGGAGTGACTACGGTA  267
V  92.4% (230/249)  IGHV3-23*01  227  .......G...............A..........................G.............G....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD4-17*01  1    -------------------------------------------------------------------------------..........-  10

                                      ---------------->                                  
                                      R  L  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1292   268  GACTCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (47/47)   IGHJ4*02     2    ----...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_220945

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           353     1e-99
IGHD3-3*01                                                                                            25.7    0.003
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTTTCCGGGAAG	TACGATTTTGGGAGTG	CCTTAGGGGGTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTTTCCGGGAAGTACGATTTTGGGAGTGCCTTAGGGGGTCTTGACTAC	AKDLSGKYDFGSALGGLDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  H  Y  G  V  H  W  V  R  Q  A  P  A  K  G  L  
                    Query_1293   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTCACTATGGGGTGCACTGGGTCCGCCAGGCTCCAGCCAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-30*18  47   ....................G.......................AG......CA........................G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  T  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1293   91   AGTGGGTGGCACTTATAACATACGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (238/250)  IGHV3-30*18  137  ...........G.....T....T...................................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  L  S  G  K  Y  D  
                    Query_1293   181  AGAACACGGTGTATCTGCAAATGAACAGCCTGAGACCTGAGGACACGGCTGTATATTACTGTGCGAAAGATCTTTCCGGGAAGTACGATT  270
V  95.2% (238/250)  IGHV3-30*18  227  ........C..........................G................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD3-3*01   5    -----------------------------------------------------------------------------------.......  11

                                      -IMGT----------------------->                                  
                                      F  G  S  A  L  G  G  L  D  Y  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_1293   271  TTGGGAGTGCCTTAGGGGGTCTTGACTACTGGGGCCAGGGCACCCTGATCACCGTCTCCTCAG  333
D  93.8% (15/16)    IGHD3-3*01   12   ..T......------------------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    ---------------------...................A......G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_220948

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           315     5e-88
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	46	5	0	90.2
CDR2-IMGT	102	125	24	21	3	0	87.5
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	233	217	16	0	93.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  L  R  Q  A  P  G  K  G  P  E  W  V  S  A  I 
                    Query_1294   15   TGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGCTCCGCCAGGCTCCAGGGAAGGGGCCGGAGTGGGTCTCAGCGATT  104
V  93.1% (217/233)  IGHV3-23*01  64   .........................G..G.T.....A....C...G........................T...............T...  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       T  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  K  N  T  L  Y  L 
                    Query_1294   105  ACTGGGAGTGGTAGTAGCACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCAAGAACACGCTGTATCTG  194
V  93.1% (217/233)  IGHV3-23*01  154  .G...T......G..............G......................................A.......................  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------CDR3-IMGT----------------->
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  Y  S  P  L  D  Y 
                    Query_1294   195  CAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC  284
V  93.1% (217/233)  IGHV3-23*01  244  ..............G....................A..............A..-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (10/10)   IGHD3-22*01  17   ------------------------------------------------------------------..........--------------  26
J  100.0% (42/42)   IGHJ4*02     7    ----------------------------------------------------------------------------------........  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1294   285  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (42/42)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_237242

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_1295   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.4% (228/244)  IGHV4-59*01  50   .....TCC...A..........................A...G...........G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N  
                    Query_1295   94   GGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACC  183
V  93.4% (228/244)  IGHV4-59*01  140  .......G..................A...............C...................................C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D  
                    Query_1295   184  AGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGACG  273
V  93.4% (228/244)  IGHV4-59*01  230  ........C....G.....C..........................G...........G.....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  94.8% (55/58)    IGHJ6*02     5    -------------------------------------------------------------------.....AC................  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_1295   274  TCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  308
J  94.8% (55/58)    IGHJ6*02     28   ........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_280666

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            402     3e-114
IGHD6-6*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	74	1	0	98.7
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	100	14	0	87.7
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	276	19	0	93.6


Alignments

                                     <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S 
                    Query_1296  1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGC  90
V  93.6% (276/295)  IGHV1-8*02  1    .......................G..........................................................C.....C.  90
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                     GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                      S  Y  D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 
                    Query_1296  91   AGCTATGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTAT  180
V  93.6% (276/295)  IGHV1-8*02  91   .............A.........................................................C..................  180
                                      S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                     -----------------------------------------------FR3-IMGT-----------------------------------
                                      A  Q  K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D 
                    Query_1296  181  GCACAGAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGAC  270
V  93.6% (276/295)  IGHV1-8*02  181  ............C............C.......A..A...C.T....A..................C..........G.GAT....G...  270
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                     -----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1296  271  ACGGCCGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  93.6% (276/295)  IGHV1-8*02  271  ........G................---------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    ------------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    ------------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_101511

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            341     5e-96
IGHD2-2*01                                                                                            16.1    2.2  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAGCGA	TGTACTACTACCAG	N/A	CTGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGAGCGATGTACTACTACCAGCTGCTTCCACCCC	ARDERCTTTSCFHP	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1297  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-7*03  47   ..............................................C..........G................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  R  D  G  T  D  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1297  91   AGTGGGTGGCCAACATTAAGCGAGATGGCACTGACAAATACTACGTCGACTCTGTGAAGGGCCGATTCACCATCTCCCGGGACAACGCCA  180
V  93.6% (234/250)  IGHV3-7*03  137  ................A....A......A.G...G........T..G..............................A.A..........  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  E  R  C  T  T  T  
                    Query_1297  181  AGAATTCACTGTATCTTCAAATGAACAGCCTGCGAGTCGAGGACACGGCCGTCTATTACTGTGCGAGAGATGAGCGATGTACTACTACCA  270
V  93.6% (234/250)  IGHV3-7*03  227  ....C...........G...............A...C...............G.................--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  85.7% (12/14)    IGHD2-2*01  8    -----------------------------------------------------------------------------....G..G.....  20

                                     ------------->                                  
                                     S  C  F  H  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1297  271  GCTGCTTCCACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  85.7% (12/14)    IGHD2-2*01  21   .-----------------------------------------------  21
J  95.7% (45/47)    IGHJ5*02    5    -...G...G.......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_227768

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_1298   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_1298   91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y 
                    Query_1298   181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTAC  270
V  91.4% (223/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD2-2*01   8    ---------------------------------------------------------------------........T........----  24
J  88.5% (46/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_1298   271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  318
J  88.5% (46/52)    IGHJ6*02     15   ...GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_247828

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     3e-115
IGHD6-25*01                                                                                           14.1    9.4   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAGG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTC	ARQSSAGRTRYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  D  Y
                    Query_1299   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATTCGACTTTACCGACTA  90
V  94.5% (275/291)  IGHV5-51*01  6    ....................................C.............................T.......A.AG.......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_1299   91   CTGGATCGTCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACGAGATACAGTCC  180
V  94.5% (275/291)  IGHV5-51*01  96   ........G..............T......................................................C........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_1299   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (275/291)  IGHV5-51*01  186  .............................C.............A.......................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  F  C  A  R  Q  S  S  A  G  R  T  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_1299   271  CATGTATTTTTGTGCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTC  360
V  94.5% (275/291)  IGHV5-51*01  276  ........AC...........---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------............................................C..  61

                                       
                                       
                    Query_1299   361  A  361
J  97.9% (47/48)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_28852

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           319     2e-89
IGHD3-3*01                                                                                            10.3    118  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATC	GAGTG	CCCTTCCAATTTG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCGAGTGCCCTTCCAATTTGACGGTATGGACGTC	ARNRVPFQFDGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_1300   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCGGTTCTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  92.1% (223/242)  IGHV4-59*08  50   .....TCC...A..........................A..AG...............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  M  H  Y  N  G  Y  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N  
                    Query_1300   94   GGATTGGCTATATGCATTACAATGGGTACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGTCCAAGAACC  183
V  92.1% (223/242)  IGHV4-59*08  140  .......G.....CT......G....AG.......................................A.....A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      L  F  S  L  M  L  T  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  N  R  V  P  F  Q  F  D  G  
                    Query_1300   184  TGTTCTCCCTGATGCTGACCTCTGTGACCTCCGCAGACACGGCCGTGTATTACTGTGCGAGAAATCGAGTGCCCTTCCAATTTGACGGTA  273
V  92.1% (223/242)  IGHV4-59*08  230  A...........A.....G..........G................................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (5/5)     IGHD3-3*01   16   ------------------------------------------------------------------.....-------------------  20
J  95.7% (45/47)    IGHJ6*02     16   ------------------------------------------------------------------------------------......  21

                                      ------->                                 
                                      M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_1300   274  TGGACGTCTGGGGCCAAGGGACGACGGTCAGCGTCTCCTCA  314
J  95.7% (45/47)    IGHJ6*02     22   ......................C.......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_224388

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            338     5e-95
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	261	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	27	20	4	3	74.1
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	104	10	0	91.2
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	270	245	22	3	90.7


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  
                    Query_1301   1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCACCTGCATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCC  87
V  90.7% (245/270)  IGHV4-4*02   26   ................T........................GC.........T...TCC......A..AG........GG..........  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  
                    Query_1301   88   GCCAGCCCCCAGGAAAGGGGCTGGAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCA  177
V  90.7% (245/270)  IGHV4-4*02   116  .............G................................T......A................................G...  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  M  S  V  D  K  S  K  N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  
                    Query_1301   178  CCATGTCAGTAGACAAGTCCAAGAATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAG  267
V  90.7% (245/270)  IGHV4-4*02   206  ....A....................CC.GT..........G....GC..........................G................  295
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  

                                      --------CDR3-IMGT-------------->                                
                                      G  R  V  G  S  S  G  W  L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_1301   268  GTCGAGTGGGTAGCAGTGGCTGGCTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  331
D  100.0% (13/13)   IGHD6-19*01  6    ----------.............-----------------------------------------  18
J  95.0% (38/40)    IGHJ4*02     7    ------------------------......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_224389

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1302   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1302   91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*01  139  ........GT........T.......G...............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_1302   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.5% (234/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1302   271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_28851

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           311     4e-87
IGHJ6*02                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	N/A	N/A	TAAACTTCCGCCCGGATCCTCCCTCCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAACTTCCGCCCGGATCCTCCCTCCCACTACTACTACGGGATGGACGTC	VNFRPDPPSHYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  G  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1303   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCCATGGCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.9% (221/243)  IGHV3-23*01  47   ...........................................C...T...C.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  A  T  G  G  R  K  I  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_1303   91   AGTGGGTCTCGAGTATAAGCGCCACTGGTGGCAGAAAGATCTACGCAGACTCCGTGAAGGGCCGGCTCACCATCTCCAGAGACAATTCCA  180
V  90.9% (221/243)  IGHV3-23*01  137  ..........AGC...T..T.GT.G......T..C.CATA.........................T........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  H  L  H  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  N  F  R  P  D  P  P  S  
                    Query_1303   181  AGAACACGCTGCATCTGCACATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGTAAACTTCCGCCCGGATCCTCCCTCCC  270
V  90.9% (221/243)  IGHV3-23*01  227  ...........T.......A....................G......................---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             

                                      GT-------------------->                                 
                                      H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1303   271  ACTACTACTACGGGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  98.2% (55/56)    IGHJ6*02     7    .............T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_224381

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD3-22*01                                                                                           18.0    0.62 
IGHJ3*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTTCAGAGGCACTTT	TATGACACTGGTGGTTAT	GGGGTC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTTCAGAGGCACTTTTATGACACTGGTGGTTATGGGGTCGATGCTTTTGATGCC	AKDLQRHFYDTGGYGVDAFDA	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  N  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1304   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTTAACAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.4% (226/250)  IGHV3-23*01  47   ....................G.....................G..............G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  L  D  G  S  G  H  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1304   91   AGTGGGTCTCAGCACTTGATGGCAGTGGTCATAAGACATACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAATTCCA  180
V  90.4% (226/250)  IGHV3-23*01  137  .............TA..AG...T......GG..GC.............................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  V  Y  L  Q  L  D  S  L  G  V  E  D  T  A  L  Y  Y  C  A  K  D  L  Q  R  H  F  Y  
                    Query_1304   181  AGAACACAGTGTACCTGCAATTAGATAGCCTGGGAGTCGAGGACACGGCCTTATATTACTGTGCGAAAGATCTTCAGAGGCACTTTTATG  270
V  90.4% (226/250)  IGHV3-23*01  227  .......GC....T......A.GA.C......A...C.............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  83.3% (15/18)    IGHD3-22*01  8    --------------------------------------------------------------------------------------....  11

                                      DR3-IMGT-------------------------->                                  
                                      D  T  G  G  Y  G  V  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1304   271  ACACTGGTGGTTATGGGGTCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTGACAGTCTCTTCAG  339
D  83.3% (15/18)    IGHD3-22*01  12   .T.G.A........-------------------------------------------------------  25
J  93.9% (46/49)    IGHJ3*01     2    --------------------.............T.....................C..C..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_224382

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           434     4e-124
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ACCCTCGG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTCGGTGCTCTTGATATC	ARTLGALDI	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	283	5	0	98.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_1305   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTAT  91
V  98.3% (283/288)  IGHV1-18*01  7    ..........................................................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_1305   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAATTATGCGCAG  181
V  98.3% (283/288)  IGHV1-18*01  97   ...................................G.........................C..................C.....A...  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_1305   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  98.3% (283/288)  IGHV1-18*01  187  ...C......................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------CDR3-IMGT-------->                                  
                                       V  Y  Y  C  A  R  T  L  G  A  L  D  I  W  G  Q  G  A  M  V  T  V  S  S  
                    Query_1305   272  GTGTATTACTGTGCGAGAACCCTCGGTGCTCTTGATATCTGGGGCCAAGGGGCAATGGTCACCGTCTCTTCAG  344
V  98.3% (283/288)  IGHV1-18*01  277  ..................-------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                        
J  95.7% (45/47)    IGHJ3*02     4    --------------------------....T....................A.....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_224383

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           377     8e-107
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	242	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1306   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.6% (242/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1306   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  99.6% (242/243)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_1306   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  99.6% (242/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1306   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_224384

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           364     5e-103
IGHD3-10*01                                                                                           14.1    8.1   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTA	GGG	CGGGGAG	AGAGGG	CTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGGGCGGGGAGAGAGGGCTTGGACTAC	RAGREGLDY	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	249	1	1	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_1307   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  96.8% (241/249)  IGHV3-73*01  47   .........A................................................................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  H  I  R  S  I  S  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_1307   91   AGTGGGTTGGCCATATTAGAAGCATCTCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATG  180
V  96.8% (241/249)  IGHV3-73*01  137  ............G...........AAG...............................................................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  E  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  R  A  G  R  E  G  L  
                    Query_1307   181  ATTCAGAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTCTATTATTGTAGGGCGGGGAGAGAGGGCTTGG  270
V  96.8% (241/249)  IGHV3-73*01  227  .....A....................................................G.....C....---------------------  295
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  100.0% (7/7)     IGHD3-10*01  15   ------------------------------------------------------------------------.......-----------  21
J  97.7% (43/44)    IGHJ4*02     5    -------------------------------------------------------------------------------------...T.  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1307   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.7% (43/44)    IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_224385

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           325     3e-91
IGHD2-15*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGAGTTC	TTGCAGTGGTGGCACGTGCTAC	CTGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGAGTTCTTGCAGTGGTGGCACGTGCTACCTGTTCTACTACTACGCTGTGGACGTC	AGSSCSGGTCYLFYYYAVDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  N  S  H  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_1308   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTAGTAATAGTCACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  92.3% (227/246)  IGHV4-39*01  49   ...............................G.........C....G....T.....................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  I  I  Y  H  S  G  S  A  F  Y  N  P  S  L  E  N  R  V  T  M  S  V  D  T  S 
                    Query_1308   91   CTGGAGTGGATGGGGATAATCTATCATAGTGGGAGCGCCTTCTACAACCCGTCCCTCGAGAATCGAGTCACCATGTCCGTTGACACGTCC  180
V  92.3% (227/246)  IGHV4-39*01  139  ...........T....GT......T...........A...A................A...G............A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  V  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  H  C  A  G  S  S  C  S  G  G  T 
                    Query_1308   181  AAGAACCAGGTCTCCCTGAGGTTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATCACTGTGCGGGGAGTTCTTGCAGTGGTGGCACG  270
V  92.3% (227/246)  IGHV4-39*01  229  .........T.........A.C...................................T........------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  81.8% (18/22)    IGHD2-15*01  7    --------------------------------------------------------------------------...T........T.GC  22

                                      DR3-IMGT------------------------>                                 
                                       C  Y  L  F  Y  Y  Y  A  V  D  V  W  G  Q  G  A  T  I  T  V  S  S 
                    Query_1308   271  TGCTACCTGTTCTACTACTACGCTGTGGACGTCTGGGGCCAGGGGGCCACGATCACCGTCTCCTCA  336
D  81.8% (18/22)    IGHD2-15*01  23   ......------------------------------------------------------------  28
J  90.9% (50/55)    IGHJ6*02     8    -----------...........G.A................A...A.....G..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_224386

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           300     9e-84
IGHD4-4*01                                                                                            16.1    2.4  
IGHJ6*02                                                                                              58.4    1e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-4*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGCGGCAC	TGACTACA	TGGGATACGGGAAGGCCGCTCCCCGGGAGGTG	GGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGACGGCGGCACTGACTACATGGGATACGGGAAGGCCGCTCCCCGGGAGGTGGGTCTGGACGTG	VRDGGTDYMGYGKAAPREVGLDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  G  Y  D  I  H  W  V  R  R  A  P  G  K  G  L  
                    Query_1309   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAATGGCTATGACATACACTGGGTCCGCCGGGCTCCAGGCAAGGGGCTGG  90
V  88.4% (221/250)  IGHV3-33*01  47   ..........................................G.A......G...G.............A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  I  I  W  V  D  G  K  Y  E  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_1309   91   AGTGGGTTTCCATCATTTGGGTTGATGGAAAGTATGAAAACTATGCGGACTCTGTGAAGGGCCGATTCACCGTTTCCAGAGACAATTCCA  180
V  88.4% (221/250)  IGHV3-33*01  137  .......GG.AG.T..A...TA........GTA..A..T.......A.....C..................A.C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  V  Y  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  V  R  D  G  G  T  D  Y  M  
                    Query_1309   181  AGAACACAGTGTATTTGCAAATGAACAGCCTGACGGCCGAGGACACGGCTGTCTATTACTGTGTGAGAGACGGCGGCACTGACTACATGG  270
V  88.4% (221/250)  IGHV3-33*01  227  .......GC.....C..................GA.................G..........C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD4-4*01   1    -------------------------------------------------------------------------------........---  8

                                      --CDR3-IMGT----------------------------->                                 
                                      G  Y  G  K  A  A  P  R  E  V  G  L  D  V  W  G  Q  G  P  T  V  S  F  S  S 
                    Query_1309   271  GATACGGGAAGGCCGCTCCCCGGGAGGTGGGTCTGGACGTGTGGGGCCAAGGGCCCACGGTCAGCTTCTCCTCA  344
J  88.9% (40/45)    IGHJ6*02     18   -----------------------------...A.......C............A.........C.G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_237248

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           366     2e-103
IGHD3-10*01                                                                                           12.2    32    
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GTCCTGGGTACTCT	GGAGTT	GC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCCTGGGTACTCTGGAGTTGCCTTTGACCAC	ARRPGYSGVAFDH	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  *  I  R  Q  P  P  G  K  G 
                    Query_1310   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGAATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.8% (242/250)  IGHV4-39*01  49   .................................................................G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  D  S  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1310   91   CTGGAGTGGATTGGGAGTATCTATGATAGTGGGAGGACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  96.8% (242/250)  IGHV4-39*01  139  ........................T..........C......................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  P  G  Y  S  G  V 
                    Query_1310   181  AAGAACCAATTCTCCCTGAAGTTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACGTCCTGGGTACTCTGGAGTT  270
V  96.8% (242/250)  IGHV4-39*01  229  ........G............C....C.......................T..G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01  18   ------------------------------------------------------------------------------------......  23

                                      ----------->                                  
                                       A  F  D  H  W  G  Q  G  K  L  V  T  V  S  S  
                    Query_1310   271  GCCTTTGACCACTGGGGCCAGGGAAAACTGGTCACCGTCTCCTCAG  316
J  93.2% (41/44)    IGHJ4*02     5    --.......T...............CC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_334383

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           363     1e-102
IGHD6-19*01                                                                                           21.8    0.040 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCAGG	GCAGTGGCTGG	CACG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTC	ARVPGQWLARGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1311   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (239/246)  IGHV3-53*01  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  M  Y  S  G  G  T  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_1311   91   AGTGGGTCTCAGTTATGTATAGCGGTGGGACCACATACTACGCAGAGTCCGTGAAGGGCCGATTCACCATCTCAAGAGACAATTCCAAGA  180
V  97.2% (239/246)  IGHV3-53*01  137  ................T...........T.G...............C..........................C................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  G  Q  W  L  A  R  
                    Query_1311   181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGTCCCAGGGCAGTGGCTGGCACGCG  270
V  97.2% (239/246)  IGHV3-53*01  227  ..................................................................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD6-19*01  8    -------------------------------------------------------------------------...........------  18
J  100.0% (46/46)   IGHJ6*02     17   ----------------------------------------------------------------------------------------..  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1311   271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (46/46)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_59528

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           386     1e-109
IGHD3-10*01                                                                                           23.8    0.011 
IGHJ1*01                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TAACGGCG	GGTTCGGGGAGT	N/A	CTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAACGGCGGGTTCGGGGAGTCTGAATACTTCCAGCAC	ARHNGGFGESEYFQH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	249	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_1312   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  99.2% (249/251)  IGHV4-39*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  C  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1312   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACTGCCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  99.2% (249/251)  IGHV4-39*01  139  .............................................AA...........................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  N  G  G  F  G  E 
                    Query_1312   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATAACGGCGGGTTCGGGGAG  270
V  99.2% (249/251)  IGHV4-39*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD3-10*01  11   -------------------------------------------------------------------------------...........  21

                                      ----------------->                                  
                                       S  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1312   271  TCTGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (12/12)   IGHD3-10*01  22   .---------------------------------------------------  22
J  100.0% (51/51)   IGHJ1*01     2    -...................................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_296497

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            366     2e-103
IGHD3-3*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGTAGTCAAG	ACGATTTTTGGAGTGGTT	TGTTCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTAGTCAAGACGATTTTTGGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTC	ARDGSQDDFWSGLFHYYYGMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  P  P  G  K  G  L  
                    Query_1313  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGGTATTGGATGAGTTGGGTCCGCCAACCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-7*03  47   ..............................................C...........C...........GG..................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_1313  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (242/250)  IGHV3-7*03  137  ........................................................A.................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><---------------------------
                                     K  N  S  V  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  Q  D  D  F  
                    Query_1313  181  AGAACTCAGTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAGAGATGGTAGTCAAGACGATTTTT  270
V  96.8% (242/250)  IGHV3-7*03  227  ........C........C..................................G.................--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-3*01  6    ---------------------------------------------------------------------------------.........  14

                                     -CDR3-IMGT--------------------------->                                 
                                     W  S  G  L  F  H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1313  271  GGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  100.0% (18/18)   IGHD3-3*01  15   .........--------------------------------------------------------------  23
J  96.4% (54/56)    IGHJ6*02    7    ---------------.......C..C.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_296496

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	CAGTAGCTGG	AAGGGGGCGGACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAGTAGCTGGAAGGGGGCGGACCACTTTGACTCC	ARDSSWKGADHFDS	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_1314   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTTACTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.0% (227/244)  IGHV4-59*01  50   .....TCC...A............................T........C........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  M  Y  Y  N  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  G  S  S  K  K  
                    Query_1314   94   GGATTGGTTATATGTATTACAATGGGAGCACCAAATACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGGCTCGTCCAAGAAGC  183
V  93.0% (227/244)  IGHV4-59*01  140  .......G.....C.......G............C........................................A.A..........C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  K  G  A  D  H  
                    Query_1314   184  AGTTCTCCCTGAAGTTGAGGTCCGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGACAGTAGCTGGAAGGGGGCGGACCACT  273
V  93.0% (227/244)  IGHV4-59*01  230  ..............C....C..T.............................C...........--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  90.0% (9/10)     IGHD6-13*01  9    ----------------------------------------------------------------...C......----------------  18
J  97.8% (44/45)    IGHJ4*02     4    ---------------------------------------------------------------------------------------...  6

                                      ------->                                  
                                      F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1314   274  TTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.8% (44/45)    IGHJ4*02     7    ......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_296491

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGCCGAAATC	GTATTACGACTTTTGGA	ATCCTTATTCTCGGCTCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCGAAATCGTATTACGACTTTTGGAATCCTTATTCTCGGCTCCTTCGACCCC	ARGGRNRITTFGILILGSFDP	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_1315   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGATCATTATTGGAGCTGGATCCGCCAGTCTCCAGGGAAGGGGCTGGAA  90
V  93.1% (228/245)  IGHV4-34*01  49   ...........................................G.T.C..C..................C.C.................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_1315   91   TGGATTGGGGAGATCAACCATAGTGGAAGCACCAACTACAACCCGTCTCTCAAGAGTCGAGTCACCATATCAGCGGACACGTCTAAGAAC  180
V  93.1% (228/245)  IGHV4-34*01  139  ...........A.....T.............................C.........................TA........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  K  L  I  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  G  R  N  R  I  T  T  F 
                    Query_1315   181  CAGTTCTCCCTGAAGCTGATCTCTGTGACCGCCGCAGACACGGCTGTATATTTCTGTGCGAGAGGGGGCCGAAATCGTATTACGACTTTT  270
V  93.1% (228/245)  IGHV4-34*01  229  ...................G...............G...........G....A............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  94.1% (16/17)    IGHD3-3*01   1    ----------------------------------------------------------------------------.........T....  14

                                      MGT-------------------------->                                  
                                       G  I  L  I  L  G  S  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_1315   271  GGAATCCTTATTCTCGGCTCCTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  334
D  94.1% (16/17)    IGHD3-3*01   15   ...-------------------------------------------------------------  17
J  97.7% (42/43)    IGHJ5*02     9    ---------------------.........................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_296490

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           358     4e-101
IGHD3-16*01                                                                                           14.1    9.1   
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	GGGGGA	TTTGGGG	ACTAC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGCGAGGGGGATTTGGGGACTACTTCGACCCC	TRGGFGDYFDP	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	4	2	0	66.7
Total	N/A	N/A	289	259	30	0	89.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  V  T  G  H  N  L  S  S  V
                    Query_1316   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGTGAGTCTCTGAAGATCTCCTGTAAGGTCACTGGACACAACTTAAGCAGTGT  90
V  89.6% (259/289)  IGHV5-51*01  6    .......................................G.........................GTT.....T...G...T.C...CTA  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  T  W  V  R  Q  I  P  G  K  G  L  E  W  I  G  F  I  Y  L  G  D  S  D  T  K  Y  S  P
                    Query_1316   91   CTGGATCACCTGGGTGCGCCAGATACCCGGAAAAGGCCTGGAGTGGATTGGATTCATCTATCTTGGTGACTCTGATACCAAATACAGCCC  180
V  89.6% (259/289)  IGHV5-51*01  96   .......GG...............G.....G.................G..GA.........C.................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  N  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1316   181  GTCCTTTCAAGGCCAGGTCACCATGTCAGCCGACAACTCCATCAACACCGCCTACTTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  89.6% (259/289)  IGHV5-51*01  186  ......C.................C...........G.......G..........C..........C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        M  Y  F  C  T  R  G  G  F  G  D  Y  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1316   271  CATGTATTTTTGTACGCGAGGGGGATTTGGGGACTACTTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  350
V  89.6% (259/289)  IGHV5-51*01  276  ........AC...G..A..-------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                              
D  100.0% (7/7)     IGHD3-16*01  15   -------------------------.......------------------------------------------------  21
J  97.7% (42/43)    IGHJ5*02     9    -------------------------------------.......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_287028

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           304     1e-84
IGHD2-8*02                                                                                            16.1    2.2  
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGCATCGCAGAA	GGTGGTGT	GAAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGCATCGCAGAAGGTGGTGTGAATTGGTTCGACCCC	AKDGIAEGGVNWFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  Q  F  S  F  Y  A  M  N  W  I  R  Q  A  P  G  K  G  L  
                    Query_1317   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCAGTTTAGTTTCTATGCCATGAACTGGATCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  88.8% (222/250)  IGHV3-23*01  47   ...................................ACC.....CAG...........G....G..........................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  G  I  S  G  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  N  I  T  R  D  N  S  
                    Query_1317   91   AGTGGGTCTCAGGCATTAGTGGAAGTGGTGGTACCACTTACTACGCAGACTCCGTGAAGGGCCGCTTCAACATTACCAGAGACAATTCTG  180
V  88.8% (222/250)  IGHV3-23*01  137  ............CT........T..........G...A..........................G....C...CT.............CA  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      G  N  T  V  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  D  G  I  A  E  G  G  
                    Query_1317   181  GGAACACGGTGTTTCTTCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTGTACTATTGTGCGAAAGATGGCATCGCAGAAGGTGGTG  270
V  88.8% (222/250)  IGHV3-23*01  227  A.......C...A...G...................C...............A..T..C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD2-8*02   14   -----------------------------------------------------------------------------------.......  20

                                      ---------------->                                  
                                      V  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1317   271  TGAATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACTGTCTCGTCAG  321
D  100.0% (8/8)     IGHD2-8*02   21   .--------------------------------------------------  21
J  95.7% (44/46)    IGHJ5*02     6    -----...................................C.....C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_296492

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           339     1e-95
IGHD1-1*01                                                                                            18.0    0.56 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GTC	TACAACTGG	CGGGAGGGGGCGTTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTCTACAACTGGCGGGAGGGGGCGTTCACTAC	GLQLAGGGVHY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1318   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGCAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.7% (230/243)  IGHV3-33*01  47   ...........................................T.GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  S  N  K  H  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_1318   91   AGTGGGTGGCAATTATATGGTATGATGGAAGTAACAAACACTATGCAGACTCCGTCCAGGGCCGATTCACCATATCCAGAGACAATTCCA  180
V  94.7% (230/243)  IGHV3-33*01  137  ...........G......................T...T................GA................C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  G  L  Q  L  A  G  G  G  V  
                    Query_1318   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCTGTATATTACTGTGGTCTACAACTGGCGGGAGGGGGCGTTC  270
V  94.7% (230/243)  IGHV3-33*01  227  ........C...........................C...G...........G..........---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (9/9)     IGHD1-1*01   3    ------------------------------------------------------------------.........---------------  11

                                      ---->                                  
                                      H  Y  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_1318   271  ACTACAGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.4% (38/39)    IGHJ4*02     10   .....T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_44749

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           363     1e-102
IGHD3-16*01                                                                                           12.2    31    
IGHJ2*01                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TGCTTA	CAATACTA	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTGCTTACAATACTAGGTACTTCGATCTC	ARAAYNTRYFDL	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1319   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGTCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (239/246)  IGHV3-53*01  47   ........................................................AG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_1319   91   AGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCCTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  97.2% (239/246)  IGHV3-53*01  137  ..................................................G.......................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  T  V  F  L  H  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  A  Y  N  T  R  Y  F  
                    Query_1319   181  ACACGGTGTTTCTTCACATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAGAGCTGCTTACAATACTAGGTACTTCG  270
V  97.2% (239/246)  IGHV3-53*01  227  .....C...A......A................................G................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (6/6)     IGHD3-16*01  28   -------------------------------------------------------------------......-----------------  33
J  100.0% (48/48)   IGHJ2*01     6    ---------------------------------------------------------------------------------.........  14

                                      ---->                                  
                                      D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_1319   271  ATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  309
J  100.0% (48/48)   IGHJ2*01     15   .......................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_44748

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           310     1e-86
IGHD2-2*01                                                                                            14.1    8.8  
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CCCGGA	TAGTACC	GCGGCGGT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGACACCCGGATAGTACCGCGGCGGTCTACTTTTACTACGGTATGGACGTC	TRHPDSTAAVYFYYGMDV	249	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	100	14	0	87.7
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	227	29	0	88.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  S  F  S  A  S  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1320   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCAGCTTTAGTGCCTCTAGTATGCACTGGGTCCGCCAGGCTCCCGGGAAAGGGCTGG  90
V  88.7% (227/256)  IGHV3-73*01  47   .........A...........C.........G....C...C....G....GC......................T...............  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  L  G  R  I  R  R  E  S  N  S  Y  P  T  E  Y  A  A  S  V  K  G  R  F  I  I  S  R  D  
                    Query_1320   91   AGTGGCTTGGCCGTATTAGAAGGGAGTCTAACAGTTACCCGACAGAATATGCTGCGTCGGTGAAAGGCAGGTTCATCATCTCCAGAGATG  180
V  88.7% (227/256)  IGHV3-73*01  137  .....G................CA.AG...........G......C.............................C..............  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  G  K  N  A  A  Y  L  Q  M  N  N  L  R  L  E  D  T  A  I  Y  Y  C  T  R  H  P  D  S  T  
                    Query_1320   181  ATGGAAAGAATGCGGCGTACCTGCAAATGAACAACCTGAGGCTCGAGGACACGGCCATATATTACTGTACTAGACACCCGGATAGTACCG  270
V  88.7% (227/256)  IGHV3-73*01  227  ..TC......CA.......T.............G.....AAAC.............G.G.................--------------  302
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (7/7)     IGHD2-2*01   13   ----------------------------------------------------------------------------------.......-  19

                                      -CDR3-IMGT--------------------->                                 
                                      A  A  V  Y  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1320   271  CGGCGGTCTACTTTTACTACGGTATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTCCTCA  335
J  94.8% (55/58)    IGHJ6*02     5    -------.....AC..........................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_26618

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           315     5e-88
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ1*01                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD4-17*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGA	TACGGTGA	GGGGACTTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGATACGGTGAGGGGACTTAT	ARDRYGEGTY	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	224	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  V  A  S  S  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1321   1    GGTCCCTGAGACTCTCCTGTGCAGCTTCTGGCCTCGTGGCCAGTAGTAACTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.7% (224/247)  IGHV3-53*01  47   .........................C.....GT..ACC.T......C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  H  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  K  
                    Query_1321   91   AGTGGGTCTCAGTTATTTATCACGGTGGTAGCACATATTACGCAGACTCCGTAAAGGGCCGATTCACCATCTCCAGAGACGACTCTAAGA  180
V  90.7% (224/247)  IGHV3-53*01  137  ....................AG...............C..............G...........................A.T..C....  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------CDR3-IMGT---------> 
                                      N  T  L  Y  L  Q  M  N  N  L  K  V  D  D  T  A  V  Y  Y  C  A  R  D  R  Y  G  E  G  T  Y  
                    Query_1321   181  ATACACTGTATCTTCAAATGAACAACCTGAAAGTCGACGACACGGCCGTGTATTATTGTGCGAGAGATCGATACGGTGAGGGGACTTATT  270
V  90.7% (224/247)  IGHV3-53*01  227  .C..G...................G.....G..C...G.................C...........-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD4-17*01  5    -----------------------------------------------------------------------........-----------  12
J  94.1% (32/34)    IGHJ1*01     19   -----------------------------------------------------------------------------------------.  19

                                                                       
                                      W  G  K  G  T  L  V  T  V  S  S  
                    Query_1321   271  GGGGCAAGGGCACCCTGGTCACCGTCTCGTCAG  303
J  94.1% (32/34)    IGHJ1*01     20   .....C......................C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_44741

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           420     7e-120
IGHD2-2*01                                                                                            21.8    0.045 
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCCG	GTAGTACCAGC	GACCTGGAGTT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCCGGTAGTACCAGCGACCTGGAGTTTGGACGTC	ARFPVVPATWSLDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_1322   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  96.5% (279/289)  IGHV1-69*01  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        T  I  S  W  V  R  Q  G  P  G  Q  G  L  E  W  M  G  G  I  K  P  S  F  G  T  T  N  Y  A  Q
                    Query_1322   91   TACTATCAGCTGGGTGCGACAGGGCCCTGGACAAGGTCTTGAGTGGATGGGAGGGATCAAGCCTAGCTTTGGAACAACAAACTACGCACA  180
V  96.5% (279/289)  IGHV1-69*01  96   .G.....................C............G......................TC....T......T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_1322   181  GAAGTTCCAGGACAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGTAGCCTGAGATCTGAGGACACGGC  270
V  96.5% (279/289)  IGHV1-69*01  186  ...........G......................................................C.......................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                 
                                        V  Y  Y  C  A  R  F  P  V  V  P  A  T  W  S  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1322   271  CGTGTATTACTGTGCGAGATTCCCGGTAGTACCAGCGACCTGGAGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  358
V  96.5% (279/289)  IGHV1-69*01  276  ...................---------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                      
D  100.0% (11/11)   IGHD2-2*01   12   -------------------------...........----------------------------------------------------  22
J  100.0% (41/41)   IGHJ6*02     22   -----------------------------------------------.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_44740

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         308     4e-86
IGHD2-2*01                                                                                            35.3    4e-06
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGGGGAG	TATTGTAGTAGTACCAACTGC	ATG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGGGGAGTATTGTAGTAGTACCAACTGCATGTACGGTCTGGACGTC	ARGGEYCSSTNCMYGLDV	246	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	104	10	0	91.2
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	222	25	0	89.9


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  I  S  S  D  I  Y  S  W  N  W  I  R  Q  P  P  G  M  G  
                    Query_1323     4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCTCCAGTGATATTTACTCCTGGAACTGGATCCGGCAGCCACCAGGGATGGGCC  93
V  89.9% (222/247)  IGHV4-30-2*01  50   .....TCC...A..........................AG.....G.GG...........G.......................A.....  139
                                           L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  V  G  H  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  R  S  
                    Query_1323     94   TGGAGTGGGTTGGCCACATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCCAGAGTCGAGTCACCATCTCAGTTGACAGGTCCA  183
V  89.9% (222/247)  IGHV4-30-2*01  140  ........A....GT..................G......................A................A.....A..........  229
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  

                                        -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                        K  K  H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  E  Y  C  S  S  
                    Query_1323     184  AGAAACACTTCTCGTTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGGGGGGGGGAGTATTGTAGTAGTA  273
V  89.9% (222/247)  IGHV4-30-2*01  230  ....C..G.....CC...A.....G...........................G..............-----------------------  296
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  95.2% (20/21)    IGHD2-2*01     5    -----------------------------------------------------------------------------.............  17

                                        IMGT--------------------->                                 
                                        T  N  C  M  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1323     274  CCAACTGCATGTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  95.2% (20/21)    IGHD2-2*01     18   ...G....---------------------------------------------------  25
J  97.9% (47/48)    IGHJ6*02       15   -----------......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_44743

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           367     6e-104
IGHD2-15*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACTGGC	ATATTGTAGTGGT	ATGAGTTGCACCTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACTGGCATATTGTAGTGGTATGAGTTGCACCTCTTACTACTACGCTATGGACGTC	ARVLAYCSGMSCTSYYYAMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1324   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1324   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAACTCCA  180
V  97.2% (242/249)  IGHV3-33*01  137  ................................................................A....................T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  L  A  Y  C  S  G  
                    Query_1324   181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGTACTGGCATATTGTAGTGGTA  270
V  97.2% (242/249)  IGHV3-33*01  227  ..............C.....................................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD2-15*01  4    ----------------------------------------------------------------------------.............-  16

                                      DR3-IMGT-------------------------->                                 
                                      M  S  C  T  S  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1324   271  TGAGTTGCACCTCTTACTACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  338
J  98.1% (53/54)    IGHJ6*02     9    --------------..........G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_44745

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           402     3e-114
IGHD6-25*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAGG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTC	ARQSSAGRTRYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	274	17	0	94.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  D  Y
                    Query_1325   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATTCGACTTTACCGACTA  90
V  94.2% (274/291)  IGHV5-51*01  6    ....................................C.............................T.......A.AG.......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  K  P  G  K  G  L  E  R  M  G  L  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_1325   91   CTGGATCGTCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGCGGATGGGGCTCATCTATCCTGGTGACTCTGATACGAGATACAGTCC  180
V  94.2% (274/291)  IGHV5-51*01  96   ........G..............T...................T........A.........................C........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_1325   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  94.2% (274/291)  IGHV5-51*01  186  ...........................................A.......................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  F  C  A  R  Q  S  S  A  G  R  T  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_1325   271  CATGTATTTTTGTGCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTC  360
V  94.2% (274/291)  IGHV5-51*01  276  ........AC...........---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------............................................C..  61

                                       
                                       
                    Query_1325   361  A  361
J  97.9% (47/48)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_44744

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD2-21*02                                                                                           16.1    2.5   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	ATTTG	GGTGATGACTG	GGATCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATTTGGGTGATGACTGGGATCAATACTACTTTGACTAC	ANLGDDWDQYYFDY	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	70	4	0	94.6
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	46	5	0	90.2
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	292	4	4	0	0	100
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  T  G  E  S  L  K  I  S  C  R  C  S  G  Y  R  F  T  
                    Query_1326   2    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGACCGGGGAGTCTCTGAAGATCTCCTGTAGGTGTTCTGGATACAGGTTTACCA  91
V  93.8% (273/291)  IGHV5-51*01  2    ....G.................................C...........................A.G.............C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  M  G  M  M  N  P  G  D  S  D  T  R  Y  
                    Query_1326   92   ATTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACATGGGAATGATGAATCCTGGTGACTCTGATACCAGATACA  181
V  93.8% (273/291)  IGHV5-51*01  92   GC..........G...................................GG.....G..C..CT...........................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  P  F  Q  G  Q  V  T  I  S  A  D  E  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  
                    Query_1326   182  GCCCGCCCTTCCAAGGCCAGGTCACCATCTCAGCCGACGAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACA  271
V  93.8% (273/291)  IGHV5-51*01  182  .....T................................A..........C...........................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  A  N  L  G  D  D  W  D  Q  Y  Y  F  D  Y  W  G  Q  G  T  L  V  S  V  S  
                    Query_1326   272  CCGCCATGTATTACTGTGCGAATTTGGGTGATGACTGGGATCAATACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCT  361
V  93.8% (273/291)  IGHV5-51*01  272  .....................---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  90.9% (10/11)    IGHD2-21*02  11   --------------------------....G......-----------------------------------------------------  21
J  97.9% (47/48)    IGHJ4*02     1    ---------------------------------------------...................................A.........  45

                                         
                                      S  
                    Query_1326   362  CAG  364
J  97.9% (47/48)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_44746

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           293     2e-81
IGHD2-15*01                                                                                           12.2    33   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GTGGGCCCACGGTTTTCTACGACAGTGAC	GGTGGAAGC	CGATTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGGTGGGCCCACGGTTTTCTACGACAGTGACGGTGGAAGCCGATTCCTTGACTCC	VRGGPTVFYDSDGGSRFLDS	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	218	31	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  H  F  T  F  S  S  Y  V  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1327   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCCATTTCACCTTCAGTAGCTATGTTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  87.6% (218/249)  IGHV3-30*04  47   ............................TGGA...................C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  S  I  S  Y  D  G  N  D  I  D  S  A  D  S  V  R  G  R  F  T  I  S  R  D  N  Y  
                    Query_1327   91   AGTGGCTGGCTTCCATATCATATGATGGAAATGACATCGACTCCGCAGACTCCGTGCGGGGCCGATTCACCATCTCCAGAGACAATTACA  180
V  87.6% (218/249)  IGHV3-30*04  137  .....G....AGTT................G.A.T.AAT...A.............AA.............................C..  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  D  I  L  Y  L  Q  M  D  S  L  R  G  D  D  T  A  V  Y  Y  C  V  R  G  G  P  T  V  F  Y  
                    Query_1327   181  AGGACATACTATATCTGCAAATGGACAGCCTGAGAGGTGACGACACGGCTGTCTATTATTGTGTAAGAGGTGGGCCCACGGTTTTCTACG  270
V  87.6% (218/249)  IGHV3-30*04  227  ..A...CG..G............A............C...G...........G.....C....CG....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      D  S  D  G  G  S  R  F  L  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1327   271  ACAGTGACGGTGGAAGCCGATTCCTTGACTCCTGGGGCCAGGGAACCCTCGTCACCGTCTCCTCAG  336
D  88.9% (8/9)      IGHD2-15*01  14   --------.....T...-------------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    ------------------------......A..................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_106207

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           447     8e-128
IGHD5-18*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTATCCTC	TACAGCTATGG	GGAAGATGGA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTATCCTCTACAGCTATGGGGAAGATGGATACGGTATGGACGTC	ARGILYSYGEDGYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	288	2	0	99.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_1328   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  99.3% (288/290)  IGHV1-69*01  6    ..................G..........A............................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q
                    Query_1328   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACA  180
V  99.3% (288/290)  IGHV1-69*01  96   ..........................................................................................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_1328   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  99.3% (288/290)  IGHV1-69*01  186  ..........................................................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  G  I  L  Y  S  Y  G  E  D  G  Y  G  M  D  V  W  G  Q  G  T  T  V  P  F
                    Query_1328   271  CGTGTATTACTGTGCGAGAGGTATCCTCTACAGCTATGGGGAAGATGGATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCCCCTT  360
V  99.3% (288/290)  IGHV1-69*01  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (11/11)   IGHD5-18*01  6    ----------------------------...........---------------------------------------------------  16
J  95.8% (46/48)    IGHJ6*02     15   -------------------------------------------------....................................A..G.  55

                                             
                                        S  S 
                    Query_1328   361  CTCCTCA  367
J  95.8% (46/48)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_334381

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           339     2e-95
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACCGCGAAAGTGG	GGAGTGGT	C	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACCGCGAAAGTGGGGAGTGGTCTTGATATC	ARDTAKVGSGLDI	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	234	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  A  V  S  S  S  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_1329   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCGCCGTCAGCAGCAGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  93.2% (234/251)  IGHV4-61*01  49   .................................T..........TG...G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  D  T  K  Y  N  P  P  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_1329   91   CTGGAATGGATTGGGTATATCTACTACGGTGGAGACACCAAGTACAACCCCCCCCTCAAGAGTCGCGTCACCATATCATTAGACACGTCC  180
V  93.2% (234/251)  IGHV4-61*01  139  .....G.................T...A....GAG......C.........T.............A............G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  S  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  D  T  A  K  V  G  S 
                    Query_1329   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGGCCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATACCGCGAAAGTGGGGAGT  270
V  93.2% (234/251)  IGHV4-61*01  229  .................................A...................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-3*01   15   -------------------------------------------------------------------------------------.....  19

                                      ----------->                                  
                                       G  L  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_1329   271  GGTCTTGATATCTGGGGCCAAGGGACAATGGTCATCGTCTCTTCAG  316
D  100.0% (8/8)     IGHD3-3*01   20   ...-------------------------------------------  22
J  97.6% (41/42)    IGHJ3*02     9    ----..............................C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_168330

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*03                                                                                           316     2e-88
IGHD1-26*01                                                                                           12.2    31   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CG	AGTGGG	GATCTAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGACGAGTGGGGATCTAGTGACTAC	TRDEWGSSDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  G  S  Y  W  M  H  W  V  R  Q  A  P  R  K  G  L  
                    Query_1330   1    GGTCCCTGAGACTCTCCTGTGTGGCCTCTGGATTCACCTTCGGTAGTTACTGGATGCACTGGGTCCGCCAAGCTCCGAGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-74*03  47   .....................CA..................A....C.............................AG............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  I  N  P  N  G  G  T  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  V  
                    Query_1330   91   AGTGGGTCTCACGAATTAATCCTAATGGGGGCACTACATCTTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGTCA  180
V  90.4% (226/250)  IGHV3-74*03  137  T............T......AG.G.....A.T.GC...A.G..............................................C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  D  E  W  G  S  S  D  
                    Query_1330   181  AGAACACACTGTATTTGCAGATGGACAGTCTGAGAGCCGAGGACACGGCTGTGTATTATTGTACAAGAGACGAGTGGGGATCTAGTGACT  270
V  90.4% (226/250)  IGHV3-74*03  227  .......G......C....A...A..................................C...G.......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-26*01  6    ------------------------------------------------------------------------......------------  11
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_1330   271  ACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   ..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_168331

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           302     3e-84
IGHD1-1*01                                                                                            18.0    0.54 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAG	TGGAACGAC	GGG	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGAGTGGAACGACGGGGACGAC	ARHEWNDGDD	233	262	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	46	30	24	6	0	80
FR2-IMGT	47	97	51	47	4	0	92.2
CDR2-IMGT	98	118	21	18	3	0	85.7
FR3-IMGT	119	232	114	110	4	0	96.5
CDR3-IMGT (germline)	233	240	8	8	0	0	100
Total	N/A	N/A	227	210	17	0	92.5


Alignments

                                      <F><----------CDR1-IMGT---------><--------------------FR2-IMGT---------------------><-----
                                       S  G  D  S  I  S  N  N  L  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  A  I  Y 
                    Query_1331   14   TCTGGAGACTCCATCAGCAATAATCTTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGAGCTATCTAT  103
V  92.5% (210/227)  IGHV4-39*01  73   .....T.G...........G..G.AG.......................................G..............GAG.......  162
                                       S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y 

                                      CDR2-IMGT-----><----------------------------------------------------FR3-IMGT--------------
                                       Y  T  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  K  F  S  L  K  L 
                    Query_1331   104  TATACTGGAAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACAAGTTCTCCCTGAAGCTG  193
V  92.5% (210/227)  IGHV4-39*01  163  ....G...G.G.............................................................C.................  252
                                       Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L 

                                      --------------------------------------><----------CDR3-IMGT--------->                     
                                       T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  E  W  N  D  G  D  D  W  G  Q  G  T  L  V 
                    Query_1331   194  ACCTCTGTCACCGCCGCAGACACGGCTGTGTACTACTGTGCGAGACATGAGTGGAACGACGGGGACGACTGGGGCCAGGGAACCCTGGTC  283
V  92.5% (210/227)  IGHV4-39*01  253  .G......G.......................T..............-------------------------------------------  299
                                       S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                                              
D  100.0% (9/9)     IGHD1-1*01   9    ---------------------------------------------------.........------------------------------  17
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------...T.......................  35

                                                   
                                       T  V  S  S  
                    Query_1331   284  ACCGTCTCCTCAG  296
J  97.5% (39/40)    IGHJ4*02     36   .............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_168333

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         341     5e-96
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGC	TGTAGTGGTGTTAACAGCTACT	GT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCTGTAGTGGTGTTAACAGCTACTGTCTACTTTGACTCC	AREAVVVLTATVYFDS	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  V  V  S  G  Y  S  I  S  S  D  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_1332     1    ACCCTGTCCCTCACCTGCGTTGTCTCTGGTTACTCCATCAGCAGTGATTACTACTGGGGCTGGATCCGGCAGCCCCCTGGGAAGGGGCTG  90
V  94.0% (233/248)  IGHV4-38-2*02  49   ..................AC..........................G..............................A............  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  V  Y  H  S  G  I  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  V  G  T  S  K 
                    Query_1332     91   GAATGGATTGGGAGTGTCTATCATAGTGGCATCACCTACGACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGGCACGTCCAAG  180
V  94.0% (233/248)  IGHV4-38-2*02  139  ..G............A.............G.G.......T.......................................A..........  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                         N  Q  F  S  L  K  L  R  S  V  T  A  A  D  P  A  V  Y  Y  C  A  R  E  A  V  V  V  L  T  A 
                    Query_1332     181  AACCAGTTCTCCCTAAAGCTGAGGTCTGTGACCGCCGCGGACCCGGCCGTCTATTACTGTGCGAGAGAAGCTGTAGTGGTGTTAACAGCT  270
V  94.0% (233/248)  IGHV4-38-2*02  229  ..............G........C..............A...A.......G.................----------------------  296
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  86.4% (19/22)    IGHD2-15*01    8    -----------------------------------------------------------------------..........G..G.T...  26

                                        ----------------->                                  
                                         T  V  Y  F  D  S  W  G  Q  G  A  L  V  S  V  S  S  
                    Query_1332     271  ACTGTCTACTTTGACTCCTGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  322
D  86.4% (19/22)    IGHD2-15*01    27   ...-------------------------------------------------  29
J  93.6% (44/47)    IGHJ4*02       2    -----...........A.............A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_168335

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           339     1e-95
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GTC	TACAACTGG	CGGGAGGGGGCGTTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTCTACAACTGGCGGGAGGGGGCGTTCACTAC	GLQLAGGGVHY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1333   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGCAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.7% (230/243)  IGHV3-33*01  47   ...........................................T.GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  S  N  K  H  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_1333   91   AGTGGGTGGCAATTATATGGTATGATGGAAGTAACAAACACTATGCAGACTCCGTCCAGGGCCGATTCACCATATCCAGAGACAATTCCA  180
V  94.7% (230/243)  IGHV3-33*01  137  ...........G......................T...T................GA................C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  G  L  Q  L  A  G  G  G  V  
                    Query_1333   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCTGTATATTACTGTGGTCTACAACTGGCGGGAGGGGGCGTTC  270
V  94.7% (230/243)  IGHV3-33*01  227  ........C...........................C...G...........G..........---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (9/9)     IGHD1-1*01   3    ------------------------------------------------------------------.........---------------  11

                                      ---->                                  
                                      H  Y  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_1333   271  ACTACAGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.4% (38/39)    IGHJ4*02     10   .....T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_168336

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           353     9e-100
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ5*01                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGGGGCGCGCCC	GTATTACTTTGATAG	GCACAGGCCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCGGGGGCGCGCCCGTATTACTTTGATAGGCACAGGCCTTTCGACTCC	ARAGARPYYFDRHRPFDS	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	235	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_1334   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  96.3% (235/244)  IGHV4-59*01  49   ..........................................A....................................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  D  M  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  S  K  N 
                    Query_1334   91   TGGATTGGGGATATGTATTACAGTGGTAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCCTATCAGTAGACACGTCCAAGAAC  180
V  96.3% (235/244)  IGHV4-59*01  139  .........T....C...........G.......................................A.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  F  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  A  R  P  Y  Y  F  D 
                    Query_1334   181  CAGTTCTCCCTGAAGCTGTTCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGCGGGGGCGCGCCCGTATTACTTTGAT  270
V  96.3% (235/244)  IGHV4-59*01  229  ..................AG........................................A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD3-22*01  1    -----------------------------------------------------------------------------........A....  13

                                      -------------------->                                  
                                       R  H  R  P  F  D  S  W  G  Q  E  A  L  V  T  V  S  S  
                    Query_1334   271  AGGCACAGGCCTTTCGACTCCTGGGGCCAGGAAGCCCTGGTCACCGTCTCCTCAG  325
D  93.3% (14/15)    IGHD3-22*01  14   ..-----------------------------------------------------  15
J  93.0% (40/43)    IGHJ5*01     9    ------------.................A.G.A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_168338

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*03                                                                                           347     7e-98
IGHD3-10*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*03	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGGTTCGAGGACTTATTA	CGTCCCCG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATGGTTCGAGGACTTATTACGTCCCCGACAACTGGCTCGCCACC	ARDGSRTYYVPDNWLAT	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  I  F  R  S  Y  W  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_1335   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCAGGATTCATCTTCAGAAGTTACTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-74*03  47   .....................C......T.......C......T..C.........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  A  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  A  
                    Query_1335   91   TGTGGGTCGCACGTATCAATAGTGATGGGAGTAGCACAACTTACGCGGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-74*03  137  ........T.......T.......................G............................C....................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      N  N  T  M  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  R  T  Y  Y  
                    Query_1335   181  ACAACACGATGTATCTACAAATGAACAGTCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCAAGAGATGGTTCGAGGACTTATTACG  270
V  94.4% (236/250)  IGHV3-74*03  227  .G......C.......G................................T....................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-10*01  10   ----------------------------------------------------------------------.......G...G......--  27

                                      GT-------------------->                                  
                                      V  P  D  N  W  L  A  T  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_1335   271  TCCCCGACAACTGGCTCGCCACCTGGGGCCAGGGAAGCCTGGTCATCGTCTCCTCAG  327
J  90.2% (46/51)    IGHJ5*02     1    ------........T...A.C...............C........C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_168339

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           316     2e-88
IGHD2-15*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CC	GATATTGTGGTGGCGGTGACTGCTACTC	GGGACCGGAG	GACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCGATATTGTGGTGGCGGTGACTGCTACTCGGGACCGGAGGACCAC	ARDRYCGGGDCYSGPEDH	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1336   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGCATATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-21*01  47   ............................................AGC...AG......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  N  T  Y  D  E  F  Y  A  D  S  V  K  G  R  F  T  V  Y  R  D  N  A  
                    Query_1336   91   AGTGGGTCTCCTCCATTAGTAGTAATACTTATGACGAATTCTATGCAGACTCAGTGAAGGGCCGGTTCACCGTCTACAGAGACAACGCCA  180
V  90.4% (226/250)  IGHV3-21*01  137  ..........A.............G..G.AG.T..AT..A...C....................A......A...C..............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  N  S  L  Y  L  Q  M  Y  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  R  Y  C  G  G  G  
                    Query_1336   181  GGAACTCACTGTATCTCCAAATGTACAACCTGAGAGTCGAAGACACGGCTGTGTATTACTGTGCGAGAGACCGATATTGTGGTGGCGGTG  270
V  90.4% (226/250)  IGHV3-21*01  227  A...............G......A...G........C...G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  85.7% (24/28)    IGHD2-15*01  3    ------------------------------------------------------------------------........A....T...A  20

                                      IMGT--------------------->                                  
                                      D  C  Y  S  G  P  E  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1336   271  ACTGCTACTCGGGACCGGAGGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  85.7% (24/28)    IGHD2-15*01  21   G.........--------------------------------------------------  30
J  97.5% (39/40)    IGHJ4*02     9    --------------------...T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_164638

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           335     4e-94
IGHD1-20*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD1-20*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGATTTGGCA	ATAACTGG	GCCCACTCGAGAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGATTTGGCAATAACTGGGCCCACTCGAGAGTACTATGGTTTGGACGTC	ARDDLAITGPTREYYGLDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_1337   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGGCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-11*01  47   ...................................................................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  M  S  S  S  G  S  I  I  K  Y  A  D  S  V  E  G  R  F  V  M  S  R  D  N  A  
                    Query_1337   91   AGTGGGTCTCACACATGAGTAGTAGTGGTAGTATCATAAAGTATGCAGACTCTGTGGAGGGCCGATTCGTCATGTCCAGGGACAACGCCG  180
V  92.8% (232/250)  IGHV3-11*01  137  .......T...T....T................C....T.C..C............A...........AC...C...............A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      E  N  S  L  Y  L  Q  M  T  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  D  L  A  I  T  G  
                    Query_1337   181  AAAACTCACTGTATCTGCAAATGACCAGTCTAAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAGAGACGATTTGGCAATAACTGGGC  270
V  92.8% (232/250)  IGHV3-11*01  227  .G......................A...C..G....................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-20*01  4    --------------------------------------------------------------------------------........--  11

                                      -IMGT----------------------->                                 
                                      P  T  R  E  Y  Y  G  L  D  V  *  G  Q  G  T  T  V  T  V  S  S 
                    Query_1337   271  CCACTCGAGAGTACTATGGTTTGGACGTCTAGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  94.1% (48/51)    IGHJ6*02     12   -----------.....C...A.........G...............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_226048

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           329     3e-92
IGHD5-12*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCCTAGTAGAAA	TGGCTACAATT	GGGGGTGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATCGGCCTAGTAGAAATGGCTACAATTGGGGGTGTTTTGACTAC	ARDRPSRNGYNWGCFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  G  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1338   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTACCTTCAGTAGTTTTGGCATAAATTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-30*03  47   ..................................C...........C.A......GC.C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  F  A  D  S  V  K  G  R  F  A  I  S  R  D  N  S  
                    Query_1338   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATATTTTGCAGACTCCGTGAAGGGCCGATTCGCCATCTCCAGAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-30*03  137  ........................................C.A.........................A.....................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  M  Y  L  Q  M  N  S  L  K  V  E  D  T  G  I  Y  Y  C  A  R  D  R  P  S  R  N  G  
                    Query_1338   181  AGAACACAATGTATCTGCAGATGAACAGCCTAAAAGTTGAGGACACGGGTATATACTACTGTGCAAGAGATCGGCCTAGTAGAAATGGCT  270
V  92.0% (230/250)  IGHV3-30*03  227  .......GC..........A...........G.G..C...........C.G.G..T........G.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD5-12*01  11   -------------------------------------------------------------------------------------.....  15

                                      GT-------------------->                                
                                      Y  N  W  G  C  F  D  Y  W  G  Q  G  T  L  V  A  V  S  S
                    Query_1338   271  ACAATTGGGGGTGTTTTGACTACTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  325
D  90.9% (10/11)    IGHD5-12*01  16   ..G...-------------------------------------------------  21
J  97.6% (40/41)    IGHJ4*02     6    --------------..............................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_186653

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     9e-100
IGHD6-13*01                                                                                           21.8    0.041 
IGHJ3*01                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  L  S  G  G  S  I  S  S  S  G  F  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_1339   1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGGCTCCATCAGCAGTAGTGGTTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.2% (238/250)  IGHV4-31*03  49   .....................G.......................G......A........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_1339   91   CTGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCT  180
V  95.2% (238/250)  IGHV4-31*03  139  .....................T..................A.................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V 
                    Query_1339   181  AAGAACCAATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTA  270
V  95.2% (238/250)  IGHV4-31*03  229  ........G..........A.....GC...............................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD6-13*01  11   ------------------------------------------------------------------------...........-------  21

                                      ----------------->                                  
                                       G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1339   271  GGCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  98.0% (48/49)    IGHJ3*01     2    ---.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_175397

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           344     6e-97
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGTCGTC	ATTACGATTTTTGGAGTGGTT	TTGACGCCACGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGTCGTCATTACGATTTTTGGAGTGGTTTTGACGCCACGTACTACTTTGACTTC	ARGRHYDFWSGFDATYYFDF	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  H  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1340   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTCACTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*08  49   .............................................T...A........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  D  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_1340   91   TGGATTGGGTATATCGACTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAGAGC  180
V  95.5% (231/242)  IGHV4-59*08  139  ...............T.T...............A..................................A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       H  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  H  Y  D  F  W  S  G 
                    Query_1340   181  CACTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTTTATTACTGTGCGAGGGGTCGTCATTACGATTTTTGGAGTGGT  270
V  95.5% (231/242)  IGHV4-59*08  229  ..G...........G....G...........................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (21/21)   IGHD3-3*01   3    ----------------------------------------------------------------------....................  22

                                      GT------------------------>                                  
                                       F  D  A  T  Y  Y  F  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_1340   271  TTTGACGCCACGTACTACTTTGACTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  331
D  100.0% (21/21)   IGHD3-3*01   23   .------------------------------------------------------------  23
J  95.8% (46/48)    IGHJ4*02     1    -------------............A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_70528

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           344     6e-97
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCGG	AGCAGCAGCTGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCGGAGCAGCAGCTGGTTGACTAC	ARDSEQQLVDY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	19	5	0	79.2
FR2-IMGT	51	101	51	51	0	0	100
CDR2-IMGT	102	125	24	23	1	0	95.8
FR3-IMGT	126	239	114	114	0	0	100
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	232	226	6	0	97.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  A  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  
                    Query_1341   16   GTGCAGCCTCTGGATTCACCTTCAGTGCATATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTA  105
V  97.4% (226/232)  IGHV3-21*01  65   ..........................AGC...AG........................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  S  I  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_1341   106  GTAGTAGTATTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGC  195
V  97.4% (226/232)  IGHV3-21*01  155  .........G................................................................................  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-----------CDR3-IMGT----------->             
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  E  Q  Q  L  V  D  Y  W  G  Q  G  
                    Query_1341   196  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTCGGAGCAGCAGCTGGTTGACTACTGGGGCCAGGGAA  285
V  97.4% (226/232)  IGHV3-21*01  245  ....................................................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (12/12)   IGHD6-13*01  7    ---------------------------------------------------------............---------------------  18
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------.....................  27

                                                           
                                      T  L  V  T  V  S  S  
                    Query_1341   286  CCCTGGTCACCGTCTCCTCAG  306
J  100.0% (42/42)   IGHJ4*02     28   .....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_64295

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD2-15*01                                                                                           16.1    2.3  
IGHJ5*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TCAGCAGGTTGGCTGCGTGACTCC	GCTACTCC	CCGTGTT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATCAGCAGGTTGGCTGCGTGACTCCGCTACTCCCCGTGTTAACTGGTTCGACCCC	AKSAGWLRDSATPRVNWFDP	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  A  G  F  A  F  G  T  Y  A  M  N  W  V  R  Q  A  P  G  T  G  L  
                    Query_1342   1    GGTCCCTGAGACTCTCCTGTGCAGCCGCTGGATTCGCCTTTGGCACCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGACGGGGCTGG  90
V  93.1% (231/248)  IGHV3-23*01  47   ..........................T........A.....A...G...........G.......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  D  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1342   91   AGTGGGTCTCAAGTATCAGTGGTAGTGGTGATGGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (231/248)  IGHV3-23*01  137  ...........GC...T.............G.A.........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  L  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  S  A  G  W  L  R  D  
                    Query_1342   181  AGAACACGCTACTCCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATTTATTACTGTGCGAAATCAGCAGGTTGGCTGCGTGACT  270
V  93.1% (231/248)  IGHV3-23*01  227  ..........GTAT....................................G.A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      R3-IMGT------------------------>                                  
                                      S  A  T  P  R  V  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1342   271  CCGCTACTCCCCGTGTTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  100.0% (8/8)     IGHD2-15*01  24   --........--------------------------------------------------------  31
J  100.0% (49/49)   IGHJ5*02     3    -----------------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_64297

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD2-21*01                                                                                           10.3    122   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TCTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTCTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFLQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_1343   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTTCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.2% (241/248)  IGHV4-31*03  49   ...............................G..C......C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1343   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCT  180
V  97.2% (241/248)  IGHV4-31*03  139  ................................................C......................C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  L  Q  E 
                    Query_1343   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTTCTCTATTTCTCCAAGAA  270
V  97.2% (241/248)  IGHV4-31*03  229  ..........................C.........................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD2-21*01  22   ---------------------------------------------------------------------------.....----------  26

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1343   271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_64296

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           369     2e-104
IGHD3-3*01                                                                                            33.4    1e-05 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCCATCTTGGCGG	TTACGCTTATTGGAGTGGTTATT	CCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCCATCTTGGCGGTTACGCTTATTGGAGTGGTTATTCCCTTGACTAC	ARDPHLGGYAYWSGYSLDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1344   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (243/250)  IGHV3-33*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  S  N  K  Y  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1344   91   AGTGGGTGGCAATTATATGGTATGATGGAAGTAATAAATATCATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  97.2% (243/250)  IGHV3-33*01  137  ...........G............................CT................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  G  D  D  T  A  V  Y  F  C  A  R  D  P  H  L  G  G  Y  
                    Query_1344   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGGCGACGACACGGCTGTGTATTTCTGTGCGAGAGATCCCCATCTTGGCGGTTACG  270
V  97.2% (243/250)  IGHV3-33*01  227  ....................................C...G................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.3% (21/23)    IGHD3-3*01   4    -------------------------------------------------------------------------------------.....  8

                                      -IMGT----------------------->                                  
                                      A  Y  W  S  G  Y  S  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1344   271  CTTATTGGAGTGGTTATTCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  91.3% (21/23)    IGHD3-3*01   9    A..T..............---------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_64291

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           300     8e-84
IGHD1-1*01                                                                                            10.3    115  
IGHJ5*01                                                                                              44.9    1e-08


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACT	TGGAA	GGCGTTT	GTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTTGGAAGGCGTTTGTTCGACCCC	ARGLGRRLFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	218	26	0	89.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1345   1    ACCCTGTCCCTCACCTGCACTGTCTATGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGGCTGGAG  90
V  89.3% (218/244)  IGHV4-59*01  49   .........................C............C...A..T.........GC....................G.....A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_1345   91   TGGATTGGCTATATCTATTATACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  89.3% (218/244)  IGHV4-59*01  139  ........G...........C.G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  G  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  L  F  D  P 
                    Query_1345   181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGGGGACACGGCCATTTATTTCTGTGCGAGAGGACTTGGAAGGCGTTTGTTCGACCCC  270
V  89.3% (218/244)  IGHV4-59*01  229  ...........G...C....C...........T.C..........G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD1-1*01   9    --------------------------------------------------------------------.....-----------------  13
J  84.1% (37/44)    IGHJ5*01     8    --------------------------------------------------------------------------------.......T..  17

                                                                        
                                       G  G  R  E  A  L  V  S  V  S  S  
                    Query_1345   271  GGGGGGCGAGAAGCCCTGGTCTCCGTCTCCTCAG  304
J  84.1% (37/44)    IGHJ5*01     18   T....C.A..G.A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_64290

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           318     6e-89
IGHD6-19*01                                                                                           16.1    2.4  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	CCTCTGTGAC	CAGTGCCTGGT	CGTTTGGTCCCCCCCCACGACTCTTCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCTCTGTGACCAGTGCCTGGTCGTTTGGTCCCCCCCCACGACTCTTCTTCTTTGACTCC	ARPSVTSAWSFGPPPRLFFFDS	246	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	102	12	0	89.5
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  T  G  G  S  I  S  S  T  T  Y  H  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_1346   4    CCCTGAGACTCTCCTGCACTGTCACTGGTGGCTCCATCAGCAGTACTACTTACCACTGGGGCTGGATCCGCCAGCCCCCTGGGAAGGGAC  93
V  90.8% (226/249)  IGHV4-39*01  50   .....TCC...A...........T.....................G..G....T.........................A........G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  S  Y  S  G  S  T  A  Y  N  P  S  L  R  S  R  V  T  N  S  V  D  T  S  
                    Query_1346   94   TGGAGTGGATTGGGAGTATCTCTTATAGTGGGAGCACCGCCTACAACCCGTCCCTAAGGAGTCGAGTCACCAATTCCGTGGACACGTCCA  183
V  90.8% (226/249)  IGHV4-39*01  140  .....................A................TA...............C.A..............TA.....A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  S  P  D  T  A  V  Y  Y  C  A  R  P  S  V  T  S  A  W  
                    Query_1346   184  AGAATCAATTCTCCCTGAAGCTGAGCTCTGTGACCTCCCCAGACACGGCTGTATATTACTGTGCGAGACCCTCTGTGACCAGTGCCTGGT  273
V  90.8% (226/249)  IGHV4-39*01  230  ....C..G...........................G..G.............G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD6-19*01  9    -------------------------------------------------------------------------------.....G.....  19

                                      -CDR3-IMGT--------------------------->                                  
                                      S  F  G  P  P  P  R  L  F  F  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1346   274  CGTTTGGTCCCCCCCCACGACTCTTCTTCTTTGACTCCTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  345
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------........A..................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_64293

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           288     5e-80
IGHD3-16*02                                                                                           10.3    122  
IGHJ2*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-16*02	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCCAGTTT	TTATC	CCCCCTCGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCAGTTTTTATCCCCCCTCGGACTGGATCTTCGATCTC	ARDSSFYPPSDWIFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  K  A  S  G  F  N  F  K  N  Y  N  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1347   1    GGTCCCTGAGACTCTCCTGTAAAGCCTCTGGATTCAACTTCAAGAACTACAACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  86.8% (217/250)  IGHV3-21*01  47   ....................GC..............C.....GT.G...T.G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  P  R  S  N  D  I  Q  Y  A  A  S  M  Q  G  R  I  T  I  S  R  D  N  A  
                    Query_1347   91   AGTGGGTCTCATCGATTAGGCCTAGGAGCAATGACATACAATACGCAGCCTCAATGCAGGGCCGAATTACCATCTCCAGAGACAACGCCA  180
V  86.8% (217/250)  IGHV3-21*01  137  .............C.....TAG...T..T.G.T.....T.C.......A....G..A........T.C......................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  S  S  L  Y  L  H  M  N  N  L  G  P  E  D  T  A  I  Y  F  C  A  R  D  S  S  F  Y  P  P  
                    Query_1347   181  ACAGCTCACTGTATCTCCACATGAACAACCTGGGACCCGAGGACACGGCTATCTATTTCTGTGCGAGAGATTCCAGTTTTTATCCCCCCT  270
V  86.8% (217/250)  IGHV3-21*01  227  .G.A............G..A.......G....A..G..............G.G....A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-16*02  25   -------------------------------------------------------------------------------.....------  29

                                      T------------------>                                  
                                      S  D  W  I  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_1347   271  CGGACTGGATCTTCGATCTCTGGGGCCGTGGCACCCTCGTCACAGTCTCCTCAG  324
J  92.2% (47/51)    IGHJ2*01     3    ---.....TA...........................G.....T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_52413

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           374     8e-106
IGHD5-12*01                                                                                           37.2    1e-06 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGCAAAGCAAGGAA	GGATATAGTGGCTACGATT	C	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGCAAAGCAAGGAAGGATATAGTGGCTACGATTCCTACTACGGTATGGACGTC	ARVQSKEGYSGYDSYYGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	244	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1348   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGCTTCAGTACTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.0% (244/249)  IGHV3-33*01  47   ....................................C........GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1348   91   AGTGGGTGTCAGTTATATGGTATGATGGAAGTAATAAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  98.0% (244/249)  IGHV3-33*01  137  ........G...............................C.................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  Q  S  K  E  G  Y  
                    Query_1348   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGTGCAAAGCAAGGAAGGATATA  270
V  98.0% (244/249)  IGHV3-33*01  227  .....................................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (19/19)   IGHD5-12*01  3    -----------------------------------------------------------------------------------.......  9

                                      R3-IMGT------------------------>                                 
                                      S  G  Y  D  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1348   271  GTGGCTACGATTCCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  100.0% (19/19)   IGHD5-12*01  10   ............-----------------------------------------------------  21
J  100.0% (52/52)   IGHJ6*02     11   -------------....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_225031

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           405     4e-115
IGHD2-21*02                                                                                           12.2    36    
IGHJ3*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGGACTTCA	GTGGTAACT	CCGGTGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGGACTTCAGTGGTAACTCCGGTGGTTTTGATATC	ARGDFSGNSGGFDI	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	69	2	0	97.2
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	296	5	5	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  K  S  L  K  I  S  C  K  V  S  G  Y  T  F  T  A  
                    Query_1349   8    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGAAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACACCTTTACCGCCT  97
V  94.8% (274/289)  IGHV5-51*03  5    .........................................G........................G...........G.......AG..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  
                    Query_1349   98   ATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCC  187
V  94.8% (274/289)  IGHV5-51*03  95   .C.......G...................................G............................................  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  D  T  A  Y  L  Q  W  S  G  L  K  S  S  H  P  
                    Query_1349   188  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCGACACCGCCTACCTGCAGTGGAGCGGCCTGAAGTCCTCGCACCCCG  277
V  94.8% (274/289)  IGHV5-51*03  185  ............................................AG......................A........G.....G..A...  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                
                                      A  I  Y  Y  C  A  R  G  D  F  S  G  N  S  G  G  F  D  I  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1349   278  CCATATATTACTGTGCGAGGGGGGACTTCAGTGGTAACTCCGGTGGTTTTGATATCTGGGGCCAAGGGACATTGGTCACCGTCTCTTC  365
V  94.8% (274/289)  IGHV5-51*03  275  ....G..............---------------------------------------------------------------------  293
                                      A  M  Y  Y  C  A                                                                        
D  88.9% (8/9)      IGHD2-21*02  12   ------------------------------.....G...-------------------------------------------------  20
J  97.6% (41/42)    IGHJ3*02     7    ----------------------------------------------.........................A................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_225030

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            346     2e-97
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	CCC	TTGGAGTGGTTCTTATA	GCGGTATAATAACCAGGGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGCCCTTGGAGTGGTTCTTATAGCGGTATAATAACCAGGGGTGCTTTTCATATT	VSPWSGSYSGIITRGAFHI	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	245	5	4	1	0	80
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  G  V  S  G  G  S  I  S  N  S  Y  W  W  S  W  V  R  Q  P  P  G  K  G  P 
                    Query_1350  1    ACTCTGTCCCTCACCTGCGGTGTCTCTGGTGGCTCCATCAGCAATAGTTATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCCG  90
V  95.1% (233/245)  IGHV4-4*02  49   ..C................C.......................G....A.C.....................................T.  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  V  Y  H  S  G  S  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_1350  91   GAGTGGATTGGGGAAGTCTATCATAGTGGGAGCACCAATTACAACCGGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  95.1% (233/245)  IGHV4-4*02  139  ...............A......................C.......C...........................................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                      N  H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  V  S  P  W  S  G  S  Y  S  G 
                    Query_1350  181  AACCACTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGTGAGCCCTTGGAGTGGTTCTTATAGCGGT  270
V  95.1% (233/245)  IGHV4-4*02  229  .....G................G......................................C...-------------------------  293
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  94.1% (16/17)    IGHD3-3*01  13   --------------------------------------------------------------------...........A.....-----  29

                                     MGT----------------------->                                  
                                      I  I  T  R  G  A  F  H  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1350  271  ATAATAACCAGGGGTGCTTTTCATATTTGGGGCCAAGGGACAATGGTTACCGTCTCTTCAG  331
J  93.6% (44/47)    IGHJ3*02    4    --------------.......G....C....................C.............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_225033

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           344     6e-97
IGHD2-15*01                                                                                           31.5    5e-05
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGAGTTC	TTGTACTGGTGGTAGGTGCTAC	ATGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGAGTTCTTGTACTGGTGGTAGGTGCTACATGTTCTACTACTACGCTGTGGACGTC	AGSSCTGGRCYMFYYYAVDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  V  S  I  S  T  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_1351   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGTCTCCATCAGTACTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  94.7% (233/246)  IGHV4-39*01  49   ...................C...........G.........C.G..G..........................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  S  I  Y  H  S  G  S  A  F  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  T  S 
                    Query_1351   91   CTGGAGTGGATGGGGAGTATCTATCATAGTGGGAGCGCCTTCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  94.7% (233/246)  IGHV4-39*01  139  ...........T............T...........A...A................A................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  C  T  G  G  R 
                    Query_1351   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGGGGAGTTCTTGTACTGGTGGTAGG  270
V  94.7% (233/246)  IGHV4-39*01  229  ...................A..............................................------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.9% (20/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G.........C  22

                                      DR3-IMGT------------------------>                                 
                                       C  Y  M  F  Y  Y  Y  A  V  D  V  W  G  Q  G  T  T  I  T  V  S  S 
                    Query_1351   271  TGCTACATGTTCTACTACTACGCTGTGGACGTCTGGGGCCAAGGGACCACGATCACCGTCTCCTCA  336
D  90.9% (20/22)    IGHD2-15*01  23   ......------------------------------------------------------------  28
J  94.5% (52/55)    IGHJ6*02     8    -----------...........G.A..........................G..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_64299

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGATGGA	ATTACTAT	CAAACGAAGCAATAG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCGATGGAATTACTATCAAACGAAGCAATAGTTTTGATATA	TRGDGITIKRSNSFDI	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_1352   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGGCTTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  94.7% (233/246)  IGHV3-53*01  47   ................................................A.......AGC......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_1352   91   AGTGGGTCTCAGTTATTTACAGCGGTGGTACCACATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.7% (233/246)  IGHV3-53*01  137  ...................T..........G........A..................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  L  Y  Y  C  T  R  G  D  G  I  T  I  K  R  
                    Query_1352   181  ACACGCTGTATCTTCAAATGCACAGCCTGAGAGCCGACGACACGGCCCTGTACTACTGTACGAGAGGCGATGGAATTACTATCAAACGAA  270
V  94.7% (233/246)  IGHV3-53*01  227  ....................A................G.........G....T......G......------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  3    --------------------------------------------------------------------------........--------  10

                                      ---------------->                                  
                                      S  N  S  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1352   271  GCAATAGTTTTGATATATGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  321
J  95.5% (42/44)    IGHJ3*02     7    -------.........C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_64298

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           321     7e-90
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	AGCT	CGATTTTTGGACTGGTTATT	TTAGGTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAAGCTCGATTTTTGGACTGGTTATTTTAGGTAACTTTGACTAC	AGSSIFGLVILGNFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  A  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_1353   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTAGCAGTGCTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGG  90
V  91.2% (227/249)  IGHV4-39*01  49   .............................T...........C..T...AG.........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  N  T  Y  Y  N  P  S  L  R  S  R  L  H  M  S  V  H  T  S 
                    Query_1353   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAACACCTACTATAATCCGTCCCTCAGGAGTCGACTCCACATGTCCGTACACACTTCT  180
V  91.2% (227/249)  IGHV4-39*01  139  ..................................G.........C..C..........A.......G..AC...A......G....G..C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  F  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  I  F  G  L  V 
                    Query_1353   181  AAGAACCAGTTCTTCCTGAGGCTGACCTCTGTGACCGCCGCAGACACGGCTGTTTATTACTGTGCGGGAAGCTCGATTTTTGGACTGGTT  270
V  91.2% (227/249)  IGHV4-39*01  229  .............C.....A.....G...........................G............A..---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-3*01   7    -------------------------------------------------------------------------...........G.....  23

                                      GT------------------>                                  
                                       I  L  G  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1353   271  ATTTTAGGTAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  325
D  95.0% (19/20)    IGHD3-3*01   24   ...----------------------------------------------------  26
J  97.8% (44/45)    IGHJ4*02     4    ----------..................................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_225036

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           324     8e-91
IGHD3-16*02                                                                                           25.7    0.003
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCC	ATGATCGCGTCTGGGGGAGTCATCG	AGAGGT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATATCCATGATCGCGTCTGGGGGAGTCATCGAGAGGTCTACTACGGTATGGACGTC	AKDIHDRVWGSHREVYYGMDV	237	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	106	8	0	93
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	233	220	13	0	94.4


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  N  I  Y  G  M  H  W  A  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 
                    Query_1354   12   TGTGCAGCCTCTGGATTCACGTTCAATATCTATGGCATGCACTGGGCCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATA  101
V  94.4% (220/233)  IGHV3-30*18  64   ....................C....G..G.................T...........................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  Y  D  G  S  N  E  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  V  H  L 
                    Query_1354   102  TCATATGATGGAAGTAATGAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAAAACTCGGTGCATCTG  191
V  94.4% (220/233)  IGHV3-30*18  154  ..................A.................................................TT....G...A..C..T.....  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------------------CDR3-IMGT---------
                                       E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  I  H  D  R  V  W  G  S  H  R  E  V 
                    Query_1354   192  GAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTTTATTACTGTGCGAAAGATATCCATGATCGCGTCTGGGGGAGTCATCGAGAGGTC  281
V  94.4% (220/233)  IGHV3-30*18  244  C..................................G.................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  84.0% (21/25)    IGHD3-16*02  6    ----------------------------------------------------------.....TA...T.........T....-------  30
J  98.0% (48/49)    IGHJ6*02     11   -----------------------------------------------------------------------------------------.  11

                                      ----------------->                              
                                       Y  Y  G  M  D  V  W  G  Q  G  T  T  V  P  V  S 
                    Query_1354   282  TACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCCCCGTCTCC  329
J  98.0% (48/49)    IGHJ6*02     12   .......................................A........  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_52411

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           321     6e-90
IGHD4-17*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGAACA	ACTACGGTGAC	CCAC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGAACAACTACGGTGACCCACACTTTGACTCC	ARWNNYGDPHFDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  I  N  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1355   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCATTAATTACTCCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.2% (224/243)  IGHV4-59*01  49   ........................................G..G.....A........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  H  H  S  G  S  T  D  Y  D  P  S  L  K  G  R  V  I  I  S  T  Y  T  P  K  N 
                    Query_1355   91   TGGATTGGGTATTTCCACCACAGTGGGAGCACCGACTACGACCCCTCCCTCAAGGGTCGAGTCATCATATCAACATACACGCCCAAGAAC  180
V  92.2% (224/243)  IGHV4-59*01  139  ............A..T.TT..............A.....A..............A.........C.......GT.G.....T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  H  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  W  N  N  Y  G  D  P  H  F 
                    Query_1355   181  CAGTTTTCCCTGAAGCTGCACTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGATGGAACAACTACGGTGACCCACACTTT  270
V  92.2% (224/243)  IGHV4-59*01  229  .....C............AG.................................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (11/11)   IGHD4-17*01  3    ----------------------------------------------------------------------...........---------  13
J  91.1% (41/45)    IGHJ4*02     4    -------------------------------------------------------------------------------------.....  8

                                      ----->                                  
                                       D  S  W  G  Q  G  A  L  V  V  V  S  S  
                    Query_1355   271  GACTCCTGGGGCCAGGGAGCCCTGGTCGTCGTCTCCTCAG  310
J  91.1% (41/45)    IGHJ4*02     9    ....A.............A........AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_72338

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            304     9e-85
IGHD3-10*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CTC	TTCGGGG	GTTTGGGTTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGACTCTTCGGGGGTTTGGGTTATTGACTCC	ARDSSGVWVIDS	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  F  S  F  S  S  Y  W  M  S  W  V  R  Q  S  P  G  K  G  L  
                    Query_1356   1    GGTCCCTGAGACTCTCCTGTGAAGGCTCTGGATTTAGTTTTAGTAGTTATTGGATGAGCTGGGTCCGCCAGTCTCCAGGAAAGGGGCTGG  90
V  88.8% (222/250)  IGHV3-7*03   47   .....................C..C.........C.CC........C........................G.......G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  L  D  G  S  R  Q  F  Y  V  D  S  V  K  G  R  F  S  I  S  R  D  N  E  
                    Query_1356   91   AGTGGGTGGCTAACATAAACCTGGATGGAAGTAGGCAATTCTACGTGGACTCTGTGAAGGGCCGATTCAGCATCTCCAGAGACAACGAGA  180
V  88.8% (222/250)  IGHV3-7*03   137  ..........C........G.AA.........GA.A...A...T.........................C.................CC.  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  V  Y  L  Q  M  K  N  L  R  V  E  D  T  A  V  Y  F  C  A  R  D  S  S  G  V  W  V  
                    Query_1356   181  AGAACTCAGTGTATCTACAAATGAAGAACCTGAGAGTCGAGGACACGGCCGTTTATTTCTGTGCAAGAGACTCTTCGGGGGTTTGGGTTA  270
V  88.8% (222/250)  IGHV3-7*03   227  ........C.......G........C.G........C...............G....A......G.....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-10*01  13   -------------------------------------------------------------------------.......----------  19

                                      ------->                                
                                      I  D  S  W  G  Q  G  T  L  V  V  V  S  S
                    Query_1356   271  TTGACTCCTGGGGCCAGGGAACCCTGGTCGTCGTCTCCTC  310
J  92.5% (37/40)    IGHJ4*02     7    ......A......................AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_128066

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           343     2e-96
IGHD4-4*01                                                                                            19.9    0.15 
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCGGGCCCTT	CAGTAACTAC	AATCTTCACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCGGGCCCTTCAGTAACTACAATCTTCACCACTTTGACTAC	ATGPFSNYNLHHFDY	239	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	24	0	0	100
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	21	3	0	87.5
FR3-IMGT	125	238	114	113	1	0	99.1
CDR3-IMGT (germline)	239	242	4	4	0	0	100
Total	N/A	N/A	229	224	5	0	97.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 
                    Query_1357   14   TGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATT  103
V  97.8% (224/229)  IGHV3-48*03  64   ..................................................C.......................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  Y  G  G  T  I  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_1357   104  AGTAGTTATGGTGGTACCATATACTACACAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTG  193
V  97.8% (224/229)  IGHV3-48*03  154  ......AG....A..............G..............................................................  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-----------------CDR3-IMGT----------------->
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  G  P  F  S  N  Y  N  L  H  H  F  D  Y 
                    Query_1357   194  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGACCGGGCCCTTCAGTAACTACAATCTTCACCACTTTGACTAC  283
V  97.8% (224/229)  IGHV3-48*03  244  .................................................-----------------------------------------  292
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  100.0% (10/10)   IGHD4-4*01   7    -----------------------------------------------------------..........---------------------  16
J  100.0% (45/45)   IGHJ4*02     4    -------------------------------------------------------------------------------...........  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1357   284  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  317
J  100.0% (45/45)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_253146

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           316     2e-88
IGHD6-13*01                                                                                           12.2    32   
IGHJ2*01                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD6-13*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTGGCCCAGTTT	CTGGTA	ATCAAGAAC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGGCCCAGTTTCTGGTAATCAAGAACACTTCGATCTC	ATGPVSGNQEHFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	224	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  L  D  F  N  D  H  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_1358   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGACTCGACTTCAATGACCACTATATGAGTTGGATCCGCCAGGCTCCAGGTAAGGGGCTGG  90
V  91.1% (224/246)  IGHV3-11*06  47   ........................C.......T..AC.....G....T....C.....C....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  A  Y  L  S  S  S  D  T  Y  T  N  Y  A  D  S  V  M  G  R  F  S  I  S  R  D  H  A  
                    Query_1358   91   AGTGGATTGCATATCTTAGTAGTAGTGACACTTACACAAACTACGCAGACTCTGTGATGGGCCGATTCAGCATCTCCAGAGACCACGCCA  180
V  91.1% (224/246)  IGHV3-11*06  137  .....G..T....CA...........AGT.G..........................A...........C.............A......  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  T  G  P  V  S  G  N  Q  
                    Query_1358   181  AGAAGTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTGTATTACTGTGCGACTGGCCCAGTTTCTGGTAATCAAG  270
V  91.1% (224/246)  IGHV3-11*06  227  ....C...................................G.........................------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD6-13*01  15   ------------------------------------------------------------------------------......------  20

                                      ------------->                                
                                      E  H  F  D  L  W  G  R  G  T  L  V  T  V  S  S
                    Query_1358   271  AACACTTCGATCTCTGGGGCCGTGGAACCCTGGTCACTGTCTCCTC  316
J  97.7% (42/43)    IGHJ2*01     9    ---......................C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_105462

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           325     3e-91
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGCCTG	ATGGTTCGGGGAGCTATT	TGGAGGGGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGCCTGATGGTTCGGGGAGCTATTTGGAGGGGTTACTTTGACTAC	ARLMVRGAIWRGYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  Y  S  V  S  G  G  S  F  S  S  S  N  F  Y  W  G  W  I  R  H  A  P  G  K  G 
                    Query_1359   1    ACCCTGTCCCTCACCTACAGTGTCTCTGGTGGCTCCTTCAGCAGTAGTAACTTCTACTGGGGCTGGATCCGCCACGCCCCAGGGAAGGGA  90
V  92.3% (227/246)  IGHV4-39*01  49   ................G..C................A............GT.A.....................GC.............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  W  Y  S  G  R  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1359   91   CTAGAGTGGATTGGGAATATCTGGTATAGTGGGAGGACTAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  92.3% (227/246)  IGHV4-39*01  139  ..G.............G.....AT...........C..CT........C.........................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  V  R  G  A  I 
                    Query_1359   181  AAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGCGCCTGATGGTTCGGGGAGCTATT  270
V  92.3% (227/246)  IGHV4-39*01  229  .....................C...............................G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  94.4% (17/18)    IGHD3-10*01  9    ------------------------------------------------------------------------.............T....  26

                                      GT------------------>                                  
                                       W  R  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1359   271  TGGAGGGGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (46/46)   IGHJ4*02     3    ---------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_52415

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           408     4e-116
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCCCCCGTGTTCTTCTC	GGTTCGGGGAGTAATTAT	CT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCCCCGTGTTCTTCTCGGTTCGGGGAGTAATTATCTC	ARTPRVLLGSGSNYL	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_1360   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGTTA  90
V  95.2% (275/289)  IGHV1-69*01  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        P  I  S  W  V  R  Q  A  P  G  Q  G  L  E  R  M  G  V  V  I  P  I  F  G  T  T  K  Y  A  Q
                    Query_1360   91   TCCTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGCGGATGGGAGTGGTCATCCCTATCTTTGGTACAACAAAGTACGCACA  180
V  95.2% (275/289)  IGHV1-69*01  96   .G...............................A.........T.........G.A....................G....C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  M  S  S  L  R  S  E  D  T  A
                    Query_1360   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACCAGCACAGCCTATATGGAAATGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.2% (275/289)  IGHV1-69*01  186  ..........................................G...........C.....GC............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  T  P  R  V  L  L  G  S  G  S  N  Y  L  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1360   271  CGTTTATTACTGTGCGAGAACCCCCCGTGTTCTTCTCGGTTCGGGGAGTAATTATCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.2% (275/289)  IGHV1-69*01  276  ...G...............-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  94.4% (17/18)    IGHD3-10*01  11   -------------------------------------............T.....-----------------------------------  28
J  100.0% (35/35)   IGHJ4*02     14   ---------------------------------------------------------.................................  46

                                        
                                        
                    Query_1360   361  AG  362
J  100.0% (35/35)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_186651

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           262     4e-72
IGHD3-16*01                                                                                           12.2    30   
IGHJ1*01                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-16*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTC	ATTATG	GAGCCTCA	CAGCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTCATTATGGAGCCTCACAGCAC	TRGHYGASQH	237	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	21	23	3	3	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	41	10	0	80.4
CDR2-IMGT	99	122	24	16	8	0	66.7
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	243	7	5	2	0	71.4
Total	N/A	N/A	223	195	28	0	87.4


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  T  T  Y  G  F  H  W  V  R  Q  A  P  G  G  G  L  M  W  V  S  L  I  D  E  D 
                    Query_1361   21   TCTGGATTCACCTTCACTACCTACGGGTTCCACTGGGTCCGCCAAGCTCCGGGGGGAGGACTAATGTGGGTCTCACTTATTGATGAAGAT  110
V  87.4% (195/223)  IGHV3-74*01  73   ................G..G....T..A.G....................A...AAG..G..GG............G....A..AGT...  162
                                       S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  N  S  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  S  G  A  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  K  N  T  L  Y  L  Q  M  N 
                    Query_1361   111  GGCAGCGGCGCAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAACACACTGTATCTGCAAATGAAC  200
V  87.4% (195/223)  IGHV3-74*01  163  ..G..TA..A...G...........................................A.............G..................  252
                                       G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><----------CDR3-IMGT--------->                        
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  G  H  Y  G  A  S  Q  H  W  G  Q  G  T  M  V  T 
                    Query_1361   201  AGTCTGAGAGCCGAGGACACGGCTGTCTATTATTGTACGAGAGGTCATTATGGAGCCTCACAGCACTGGGGCCAGGGCACTATGGTCACC  290
V  87.4% (195/223)  IGHV3-74*01  253  ..........................G.....C...G.A....-----------------------------------------------  295
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  100.0% (6/6)     IGHD3-16*01  3    ----------------------------------------------......--------------------------------------  8
J  92.5% (37/40)    IGHJ1*01     13   ------------------------------------------------------------....................CC........  42

                                                
                                       V  S  S  
                    Query_1361   291  GTCTCGTCAG  300
J  92.5% (37/40)    IGHJ1*01     43   .....C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_289368

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_1362   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG..G.T..................................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_1362   91   TGGATTGGATATATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  93.4% (228/244)  IGHV4-59*01  139  ........G...................G.....A............................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W 
                    Query_1362   181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------------------------------------------....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_1362   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (35/35)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_59522

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           274     8e-76
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	242	3	3	0	0	100
Total	N/A	N/A	239	207	32	0	86.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  G  S  I  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_1363   4    CCCTGAGACTCTCCTGTTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAAT  93
V  86.6% (207/239)  IGHV4-59*01  50   .....TCC...A....CA......................T.GT.A...C....G.............C...................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R  
                    Query_1363   94   GGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGAC  183
V  86.6% (207/239)  IGHV4-59*01  140  ......GG.....C.ATT................C..C...........C.....................G.A.............AC.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G  
                    Query_1363   184  ACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGTG  273
V  86.6% (207/239)  IGHV4-59*01  230  .G...........G....G............T..............G............-------------------------------  288
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  93.3% (14/15)    IGHD3-22*01  7    ----------------------------------------------------------------------------..........A...  20

                                      ---------------------->                                  
                                      G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1363   274  GCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  330
D  93.3% (14/15)    IGHD3-22*01  21   .--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    -------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_289365

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           291     6e-81
IGHD2-21*02                                                                                           14.1    8.9  
IGHJ3*02                                                                                              39.1    6e-07


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGAGTCTTGGACCT	TGGTGAC	GGTCACTTCCACCAGATAGGTGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGAGTCTTGGACCTTGGTGACGGTCACTTCCACCAGATAGGTGTTTTTGACAAG	ARDGVLDLGDGHFHQIGVFDK	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  T  S  G  F  T  F  D  T  Y  G  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_1364   1    GGTCCCTGAGACTCTCCTGTACAACGTCTGGATTCACCTTCGACACCTATGGCATGTATTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  87.2% (218/250)  IGHV3-33*01  47   ....................G..G.................AGT.G..........C.C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  W  H  D  G  S  Q  R  F  Y  G  D  S  V  K  G  R  F  S  V  S  R  D  N  S  
                    Query_1364   91   AGTGGGTGGCAAGTATTTGGCATGATGGAAGCCAGAGGTTCTATGGAGACTCTGTGAAGGGCCGATTCTCCGTCTCCAGAGACAACTCCA  180
V  87.2% (218/250)  IGHV3-33*01  137  ...........GT...A...T..........TA.T.AA.A.....C......C...............A..A.............T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  G  R  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  V  L  D  L  G  
                    Query_1364   181  AGAACACATTGTACTTGCAAATGGGCAGACTTAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGATGGAGTCTTGGACCTTGGTG  270
V  87.2% (218/250)  IGHV3-33*01  227  .......GC....TC........AA...C..G....................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-21*02  13   -------------------------------------------------------------------------------------.....  17

                                      DR3-IMGT-------------------------->                                  
                                      D  G  H  F  H  Q  I  G  V  F  D  K  C  G  Q  G  T  L  V  T  V  S  S  
                    Query_1364   271  ACGGTCACTTCCACCAGATAGGTGTTTTTGACAAGTGTGGCCAAGGGACATTGGTGACTGTTTCTTCAG  339
D  100.0% (7/7)     IGHD2-21*02  18   ..-------------------------------------------------------------------  19
J  81.8% (36/44)    IGHJ3*02     7    -------------------------......T.TC..G............A....C..C..C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_295147

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         367     6e-104
IGHD4-17*01                                                                                           21.8    0.040 
IGHJ5*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGACTACGGTG	GTGACTC	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATGACTACGGTGGTGACTCCAATTGGTTCGACCCC	VRDDYGGDSNWFDP	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	243	8	0	96.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  R  G 
                    Query_1365     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  96.8% (243/251)  IGHV4-30-2*01  49   .....................................................................................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  S  Y  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_1365     91   CTGGAGTGGATTGGGTACATCTATCATAGTGGGAGCTCCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCAATAGACACGTCC  180
V  96.8% (243/251)  IGHV4-30-2*01  139  ....................................A.....................................A...G......G....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  D  D  Y  G  G  D  S 
                    Query_1365     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGTCAGAGATGACTACGGTGGTGACTCC  270
V  96.8% (243/251)  IGHV4-30-2*01  229  .....................................................G.....C....C......-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD4-17*01    1    -----------------------------------------------------------------------...........--------  11
J  97.9% (47/48)    IGHJ5*02       2    -----------------------------------------------------------------------------------------.  2

                                        -------------->                                
                                         N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1365     271  AATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  317
J  97.9% (47/48)    IGHJ5*02       3    ..C............................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_295144

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         283     1e-78
IGHD4-17*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GTCGAAAAGG	CTACGGTGACTAC	GGAACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGTCGAAAAGGCTACGGTGACTACGGAACTTTTGACTCC	ARGRKGYGDYGTFDS	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	96	18	0	84.2
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	215	34	0	86.3


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  S  V  A  G  D  S  I  R  S  S  D  D  Y  W  N  W  I  R  Q  P  P  G  K  G  
                    Query_1366     4    CCCTGAGACTCTCCTGCTCTGTCGCTGGTGACTCCATCAGAAGTAGTGATGACTACTGGAATTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  86.3% (215/249)  IGHV4-30-4*01  50   .....TCC...A.....A.....T......G.........C...G.....T.........G.............................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  H  Y  S  G  A  S  Y  S  N  P  S  L  R  S  R  V  S  L  S  V  D  T  S  
                    Query_1366     94   TGGAGTGGATTGGCTACATCCATTACAGTGGGGCCTCCTACTCCAATCCGTCCCTCAGGAGTCGAGTTTCCTTATCGGTGGACACGTCTG  183
V  86.3% (215/249)  IGHV4-30-4*01  140  .............G......T...........AG.A......A...C..........A..........A..A....A..A........CA  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        G  N  H  F  S  L  N  V  R  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  K  G  Y  G  D  
                    Query_1366     184  GGAACCACTTCTCCCTGAACGTGAGGTCTCTGACGGCCGCGGACACGGCCGTGTATTATTGTGCCAGAGGTCGAAAAGGCTACGGTGACT  273
V  86.3% (215/249)  IGHV4-30-4*01  230  A......G...........GC....C...G....T.....A.................C..........---------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD4-17*01    4    -------------------------------------------------------------------------------...........  14

                                        ---------------->                                  
                                        Y  G  T  F  D  S  W  G  L  G  T  L  V  S  V  S  S  
                    Query_1366     274  ACGGAACTTTTGACTCCTGGGGCCTGGGAACTCTGGTCTCCGTCTCCTCAG  324
D  100.0% (13/13)   IGHD4-17*01    15   ..-------------------------------------------------  16
J  90.7% (39/43)    IGHJ4*02       6    --------.......A........A......C......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_295145

Length=417
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              69.9    4e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	GGCCTACTTTCTTAGTTGGGGTTACTCTGGTA	GTATAACAGCAGCTGG	CGAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTAC	ARQAYFLSWGYSGSITAAGEIDY	290	358	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	70	4	0	94.6
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	113	1	0	99.1
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	285	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  A  
                    Query_1367   3    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTGCCA  92
V  96.6% (285/295)  IGHV5-51*01  2    ....G.....G.............................C..G.....................................G....A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  M  P  G  Q  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  
                    Query_1367   93   CCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGCAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACA  182
V  96.6% (285/295)  IGHV5-51*01  92   G..................................A............................................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  
                    Query_1367   183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACA  272
V  96.6% (285/295)  IGHV5-51*01  182  .............................................................................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------------CDR3-IMGT----------------------------->    
                                      T  A  M  Y  Y  C  A  R  Q  A  Y  F  L  S  W  G  Y  S  G  S  I  T  A  A  G  E  I  D  Y  W  
                    Query_1367   273  CCGCCATGTATTACTGTGCGAGACAGGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTACTGGG  362
V  96.6% (285/295)  IGHV5-51*01  272  .........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  93.8% (15/16)    IGHD6-13*01  3    ---------------------------------------------------------.....G..........-----------------  18
J  95.2% (40/42)    IGHJ4*02     7    ------------------------------------------------------------------------------............  18

                                                                    
                                      G  Q  G  T  L  G  T  A  S  S  
                    Query_1367   363  GCCAGGGAACCCTGGGCACCGCCTCCTCAG  392
J  95.2% (40/42)    IGHJ4*02     19   ...............T.....T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40919688


Query= Query_295142

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         430     1e-122
IGHD3-22*01                                                                                           19.9    0.18  
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CCCCCC	TACTCTCATAGCAGTGGTT	CCTACCCTTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACCCCCCTACTCTCATAGCAGTGGTTCCTACCCTTATGATGCCTTTCATATC	AGPPYSHSSGSYPYDAFHI	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  R  I  S  C  K  G  S  G  F  S  F  A  S  Y
                    Query_1368     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGACTCTCTGAGGATCTCCTGTAAGGGTTCTGGATTCAGCTTTGCCAGCTA  90
V  97.6% (282/289)  IGHV5-10-1*01  6    ..........................................G...............................A.......A.......  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  T  D  S  Y  T  N  Y  S  P
                    Query_1368     91   CTGGATCAGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTACTGACTCTTATACCAACTACAGCCC  180
V  97.6% (282/289)  IGHV5-10-1*01  96   .........C.......................................................G........................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1368     181  GTCCTTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCATCACCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-10-1*01  186  ............................................G.............................................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------------CDR3-IMGT----------------------->                    
                                          M  Y  Y  C  A  G  P  P  Y  S  H  S  S  G  S  Y  P  Y  D  A  F  H  I  W  G  Q  G  T  M  V
                    Query_1368     271  CATGTATTACTGTGCGGGACCCCCCTACTCTCATAGCAGTGGTTCCTACCCTTATGATGCCTTTCATATCTGGGGCCAAGGGACAATGGT  360
V  97.6% (282/289)  IGHV5-10-1*01  276  ................A..-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  84.2% (16/19)    IGHD3-22*01    5    -------------------------....A.G....T.......----------------------------------------------  23
J  96.0% (48/50)    IGHJ3*02       1    ------------------------------------------------------......T...G.........................  36

                                                      
                                          T  V  S  S  
                    Query_1368     361  CACCGTCTCTTCAG  374
J  96.0% (48/50)    IGHJ3*02       37   ..............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_295143

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           336     1e-94
IGHD1-20*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGAATACAA	GTATAAC	GGAATA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGAATACAAGTATAACGGAATAGGTATGGACGTC	TRSEYKYNGIGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	245	230	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1369   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTAAGTAATAATTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (230/245)  IGHV3-53*01  47   ........................................C....GC..C.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_1369   91   AGTGGGTCTCAGTTATTTATAGTGGTGGTACCACATACTACGCGGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.9% (230/245)  IGHV3-53*01  137  ......................C.......G............A.................A............................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      T  T  L  Y  L  Q  M  N  S  L  R  A  E  D  S  A  V  Y  Y  C  T  R  S  E  Y  K  Y  N  G  I  
                    Query_1369   181  CCACACTGTATCTTCAAATGAACAGTTTGAGAGCCGAGGACTCGGCCGTGTATTACTGTACGAGATCAGAATACAAGTATAACGGAATAG  270
V  93.9% (230/245)  IGHV3-53*01  227  A...G....................CC..............A.................G.....-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD1-20*01  2    ----------------------------------------------------------------------------.......-------  8
J  100.0% (45/45)   IGHJ6*02     18   -----------------------------------------------------------------------------------------.  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1369   271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (45/45)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_295140

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            332     4e-93
IGHD3-3*01                                                                                            23.8    0.012
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAGTATGGTTCGGGTG	GATTTTCGGAGTGGT	CCCCCTTCTACTTCAG	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGAGTATGGTTCGGGTGGATTTTCGGAGTGGTCCCCCTTCTACTTCAGCGGTTTGGACGTC	ARDEYGSGGFSEWSPFYFSGLDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  H  W  M  S  W  V  R  Q  A  P  G  K  G  P  
                    Query_1370  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTAGTTTTAGTAGCCATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  92.4% (231/250)  IGHV3-7*03  47   ..................................C.CC.........T..........C............................T..  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  S  I  V  Q  D  G  T  K  R  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  G  
                    Query_1370  91   AGTGGGTGGCCAGCATAGTGCAAGATGGAACTAAGAGATATTACGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGGCG  180
V  92.4% (231/250)  IGHV3-7*03  137  ............A....AA...........G.G...A...C..T...........................................C.A  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><---------------------------
                                     E  N  S  L  Y  L  Q  M  N  S  L  R  G  D  D  T  A  V  Y  Y  C  A  R  D  E  Y  G  S  G  G  
                    Query_1370  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGGCGACGACACGGCCGTCTATTACTGTGCGAGAGATGAGTATGGTTCGGGTGGAT  270
V  92.4% (231/250)  IGHV3-7*03  227  ....................................C...G...........G.................--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD3-3*01  8    ---------------------------------------------------------------------------------------...  10

                                     --CDR3-IMGT----------------------------->                                 
                                     F  S  E  W  S  P  F  Y  F  S  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1370  271  TTTCGGAGTGGTCCCCCTTCTACTTCAGCGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
D  93.3% (14/15)    IGHD3-3*01  11   ...T........--------------------------------------------------------------  22
J  97.8% (45/46)    IGHJ6*02    17   ----------------------------....A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_295141

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            408     4e-116
IGHD6-6*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGTGAGGAACCAGCTCGTATCCGACTTC	ARAVRNQLVSDF	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	104	10	0	91.2
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	278	17	0	94.2


Alignments

                                     <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S 
                    Query_1371  1    CAGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCAGC  90
V  94.2% (278/295)  IGHV1-8*01  1    .....G........G........G................................................................C.  90
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                     GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                      S  Y  D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 
                    Query_1371  91   AGTTATGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCCAATAGTGGTAACACAGGCTAT  180
V  94.2% (278/295)  IGHV1-8*01  91   .............A......................................................T..C..................  180
                                      S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                     -----------------------------------------------FR3-IMGT-----------------------------------
                                      A  E  K  F  Q  G  R  V  T  M  T  G  D  T  S  I  T  T  A  Y  M  E  M  S  S  L  N  S  E  D 
                    Query_1371  181  GCAGAGAAGTTCCAGGGCAGAGTCACCATGACCGGGGACACTTCCATAACCACAGCCTACATGGAGATGAGCAGCCTAAACTCTGAAGAC  270
V  94.2% (278/295)  IGHV1-8*01  181  ...C.............................A..A....C.......G................C..........G.GA.....G...  270
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                     -----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  V  Y  Y  C  A  R  A  V  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1371  271  ACGGCCGTGTATTACTGTGCGAGAGCGGTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  94.2% (278/295)  IGHV1-8*01  271  .........................---------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    ------------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    ------------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_289363

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     8e-121
IGHD3-22*01                                                                                           33.4    2e-05 
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TC	ACTATGAAAGTAGTGATTATTAC	ACAGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCACTATGAAAGTAGTGATTATTACACAGATGATGCTTTTAATATC	ASHYESSDYYTDDAFNI	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	69	2	0	97.2
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	113	1	0	99.1
CDR3-IMGT (germline)	290	294	5	5	0	0	100
Total	N/A	N/A	289	280	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  T  S  G  Y  S  F  T  S  
                    Query_1372   6    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGACTTCTGGGTACAGCTTTACCAGCT  95
V  96.9% (280/289)  IGHV5-51*03  5    .................................................................GG......A................  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  L  I  Y  P  S  D  S  D  T  T  Y  S  
                    Query_1372   96   ACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGCCTCATCTATCCCAGTGACTCTGATACCACATACAGCC  185
V  96.9% (280/289)  IGHV5-51*03  95   .........G..........................................GA..........TG...............G........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_1372   186  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCG  275
V  96.9% (280/289)  IGHV5-51*03  185  ..........................................................................................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><--------------------CDR3-IMGT-------------------->                         
                                      A  M  Y  Y  C  A  S  H  Y  E  S  S  D  Y  Y  T  D  D  A  F  N  I  W  G  Q  G  T  M  V  T  
                    Query_1372   276  CCATGTATTACTGTGCGAGTCACTATGAAAGTAGTGATTATTACACAGATGATGCTTTTAATATCTGGGGCCAAGGGACAATGGTCACCG  365
V  96.9% (280/289)  IGHV5-51*03  275  ...................-----------------------------------------------------------------------  293
                                      A  M  Y  Y  C  A                                                                          
D  91.3% (21/23)    IGHD3-22*01  6    ---------------------.......T.......G.......----------------------------------------------  28
J  98.0% (49/50)    IGHJ3*02     1    -------------------------------------------------..........G..............................  41

                                               
                                      V  S  S  
                    Query_1372   366  TCTCTTCAG  374
J  98.0% (49/50)    IGHJ3*02     42   .........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_338279

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            319     2e-89
IGHD3-3*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAAGAGCGGTACGCATTGATACTGTTC	ATTACGA	GGGGCCTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAAGAGCGGTACGCATTGATACTGTTCATTACGAGGGGCCTCCTGACTAC	ATRAVRIDTVHYEGPPDY	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	46	5	0	90.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  N  S  N  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_1373  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGTCCATCAGTAATAGTAACTGGTGGACTTGGATTCGCCAGCCCCCAGGAAAGGGGCTG  90
V  91.8% (224/244)  IGHV4-4*01  49   ................................C........C.G..............G....G.C..............G.........  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  T  G  E  I  I  D  S  G  S  T  N  Y  N  P  S  L  M  S  R  V  I  I  S  L  D  K  S  K 
                    Query_1373  91   GAGTGGACTGGGGAAATTATTGATAGTGGGAGCACCAACTACAACCCGTCCCTCATGAGTCGAGTCATCATCTCACTAGACAAGTCCAAG  180
V  91.8% (224/244)  IGHV4-4*01  139  .......T.........CTA.C.................................A...........C...A...G..............  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                      N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  T  R  A  V  R  I  D  T  V 
                    Query_1373  181  AATCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGACAAGAGCGGTACGCATTGATACTGTT  270
V  91.8% (224/244)  IGHV4-4*01  229  ..C..............G....G................................G........--------------------------  292
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            

                                     GT--------------------->                                  
                                      H  Y  E  G  P  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1373  271  CATTACGAGGGGCCTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  100.0% (7/7)     IGHD3-3*01  3    -.......--------------------------------------------------  9
J  100.0% (41/41)   IGHJ4*02    8    -----------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_295148

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           352     3e-99
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCGTGCTGTTA	ACTATGATAGTGGTG	ATTCCGGTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CGTGCTGTTAACTATGATAGTGGTGATTCCGGTTGGTACTTTGACTAC	RAVNYDSGDSGWYFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	241	113	109	4	0	96.5
Total	N/A	N/A	241	233	8	0	96.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1374   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACTTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.7% (233/241)  IGHV3-33*01  47   .....................................C.......G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  E  K  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1374   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTGAAAAATACTATGCAGACTCCTTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.7% (233/241)  IGHV3-33*01  137  ................................A.T..................G....................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  R  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  R  A  V  N  Y  D  S  G  D  
                    Query_1374   181  AGCGCACACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGCCGTGCTGTTAACTATGATAGTGGTGATT  270
V  96.7% (233/241)  IGHV3-33*01  227  ..AA...G.....................................................-----------------------------  287
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                
D  93.3% (14/15)    IGHD3-22*01  6    ------------------------------------------------------------------------...........A...---  20

                                      T------------------>                                  
                                      S  G  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1374   271  CCGGTTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (46/46)   IGHJ4*02     3    --------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_348803

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           434     4e-124
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	70	1	0	98.6
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	113	1	0	99.1
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	290	284	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  
                    Query_1375   5    TGCAGTTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACT  94
V  97.9% (284/290)  IGHV5-51*03  5    .....C.........................................................................C.......G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      F  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  
                    Query_1375   95   TCTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCC  184
V  97.9% (284/290)  IGHV5-51*03  95   A...................................................G............................G........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_1375   185  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCG  274
V  97.9% (284/290)  IGHV5-51*03  185  ..........................................................................................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-------------CDR3-IMGT------------>                                  
                                      A  M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1375   275  CCATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  97.9% (284/290)  IGHV5-51*03  275  ....................----------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    ---------------------......C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_264681

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           286     1e-79
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ATTACTCTGGTTCGGGGA	AAAGTCAAGGATTTCGGAAAT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGATTACTCTGGTTCGGGGAAAAGTCAAGGATTTCGGAAATTGGCTCGACCCC	ARDRITLVRGKVKDFGNWLDP	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	217	34	0	86.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  D  G  G  Y  T  W  N  W  I  R  Q  H  P  Q  K  G 
                    Query_1376   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGTGATGGTGGTTATACCTGGAATTGGATCCGCCAGCACCCACAGAAGGGC  90
V  86.5% (217/251)  IGHV4-31*03  49   ...............................G.........CAG.........CTA.....GC..................GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  A  Y  S  G  R  A  D  Y  N  P  S  L  R  S  R  L  S  V  S  K  D  T  S 
                    Query_1376   91   CTGGAGTGGCTTGGGTCCATCGCTTACAGTGGGAGAGCCGATTACAATCCGTCCCTCAGGAGTCGACTTTCCGTGTCGAAAGACACGTCT  180
V  86.5% (217/251)  IGHV4-31*03  139  .........A......A....TA............CA..T.C.....C..........A.......G..A..A.A..AGT..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  V  S  L  N  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  I  T  L  V  R 
                    Query_1376   181  AAGAACCAGGTCTCCCTTAACGTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTATTGTGCGAGAGATCGGATTACTCTGGTTCGG  270
V  86.5% (217/251)  IGHV4-31*03  229  .........T.......G..GC...............................G.....C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  3    ---------------------------------------------------------------------------......A........  17

                                      CDR3-IMGT-------------------------->                                  
                                       G  K  V  K  D  F  G  N  W  L  D  P  W  G  Q  G  T  Q  V  I  V  T  S  
                    Query_1376   271  GGAAAAGTCAAGGATTTCGGAAATTGGCTCGACCCCTGGGGCCAGGGAACCCAGGTCATCGTCACCTCAG  340
D  94.4% (17/18)    IGHD3-10*01  18   ...-------------------------------------------------------------------  20
J  91.3% (42/46)    IGHJ5*02     6    ------------------------...T........................T.....C....T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_264680

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-72*01                                                                                           319     2e-89
IGHD2-21*02                                                                                           12.2    30   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-72*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGGA	A	GTGGTAACT	CCCGCACGGGAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTGGAAGTGGTAACTCCCGCACGGGAATTGACTAC	VGSGNSRTGIDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	10	1	0	90.9
CDR1-IMGT	19	42	24	24	0	0	100
FR2-IMGT	43	93	51	51	0	0	100
CDR2-IMGT	94	123	30	27	3	0	90
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	243	6	4	2	0	66.7
Total	N/A	N/A	236	220	16	0	93.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  S  
                    Query_1377   8    GTGCAGTCTCTGGATTCACCTTCAGTGACCACTACATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTAGTA  97
V  93.2% (220/236)  IGHV3-72*01  65   ......C................................................................................C..  154
                                         A  A  S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  T  

                                      -------CDR2-IMGT---------><----------------------------------------------------FR3-IMGT---
                                      R  D  K  A  N  G  Y  T  T  E  Y  A  A  S  V  K  G  R  F  I  I  S  R  D  D  S  K  S  S  P  
                    Query_1377   98   GAGACAAAGCTAACGGTTACACCACAGAGTACGCCGCGTCTGTGAAAGGCAGATTCATTATCTCAAGAGATGATTCAAAGAGCTCACCGC  187
V  93.2% (220/236)  IGHV3-72*01  155  ..A...........A.............A............................CC......................A.....T.T  244
                                      R  N  K  A  N  S  Y  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  S  L  

                                      -------------------------------------------------><-------------CDR3-IMGT------------>    
                                      H  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  V  G  S  G  N  S  R  T  G  I  D  Y  W  
                    Query_1377   188  ATCTGCAAATGAACAGCCTGAAAAGCGAGGACACGGCCGTCTACTATTGTGTTGGAAGTGGTAACTCCCGCACGGGAATTGACTACTGGG  277
V  93.2% (220/236)  IGHV3-72*01  245  ........................C...............G..T..C....C.A..----------------------------------  300
                                      Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R                                   
D  88.9% (8/9)      IGHD2-21*02  12   ---------------------------------------------------------.....G...------------------------  20
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------------------------------------............  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_1377   278  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_264683

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_1378   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_1378   91   GAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ...................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_1378   181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1378   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_264682

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           350     7e-99
IGHD2-8*01                                                                                            10.3    112  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	CTCACCGGA	GGTGT	T	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CTCACCGGAGGTGTT	LTGGV	249	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	109	5	0	95.6
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  T  S  G  F  N  F  G  D  F  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1379   1    GGTCCCTGAGACTCTCCTGTACAACTTCTGGATTCAATTTTGGTGATTTTGCTTTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-49*04  47   .......................G............CC..........A....A....................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  G  K  A  Y  G  W  T  T  E  Y  A  A  S  V  K  G  R  F  S  I  S  R  D  
                    Query_1379   91   AGTGGGTAGGTTTCATTAGAGGCAAAGCTTATGGTTGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCAGCATCTCTAGAGATG  180
V  95.2% (236/248)  IGHV3-49*04  137  ....................A..............G.......................................C......A.......  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--CDR3-IMGT-->       
                                      D  S  N  G  I  A  Y  L  Q  M  K  S  L  K  T  E  D  T  A  V  Y  Y  C  L  T  G  G  V  W  G  
                    Query_1379   181  ATTCCAACGGCATCGCCTATCTGCAAATGAAGAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTCTCACCGGAGGTGTTTGGGGCC  270
V  95.2% (236/248)  IGHV3-49*04  227  .......AA......................C....................................----------------------  294
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  100.0% (5/5)     IGHD2-8*01   17   -----------------------------------------------------------------------------.....--------  21
J  97.1% (33/34)    IGHJ4*02     15   -----------------------------------------------------------------------------------.......  21

                                                                 
                                      Q  G  T  L  V  S  V  S  S  
                    Query_1379   271  AGGGAACCCTGGTCAGCGTCTCCTCAG  297
J  97.1% (33/34)    IGHJ4*02     22   ...............C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_45034

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           367     6e-104
IGHD3-10*01                                                                                           14.1    9.4   
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGCC	ACTATGG	GGATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATC	ARSHYGDAYWYLDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	261	26	0	90.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T  S  Y 
                    Query_1380   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATCTTCACCAGTTAT  91
V  90.9% (261/287)  IGHV1-18*01  7    .................................................................T..........C...T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  F  E  W  M  G  W  I  S  P  Y  N  G  N  T  A  Y  A  E 
                    Query_1380   92   GGAATCACTTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAGCCTACGCAGAG  181
V  90.9% (261/287)  IGHV1-18*01  97   ..T....GC...........................C.......................G.................AA...T...C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  F  T  V  A  T  E  T  S  T  N  T  A  F  M  E  L  R  S  L  K  A  D  D  T  A 
                    Query_1380   182  AAGTTCCAGGGCAGATTCACCGTGGCCACAGAGACTTCCACGAACACAGCCTTCATGGAGCTGCGGAGTCTGAAAGCTGACGACACGGCC  271
V  90.9% (261/287)  IGHV1-18*01  187  ...C...........G.....A..A.......C..A.......G........A..........A....C....G.T..............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  S  H  Y  G  D  A  Y  W  Y  L  D  I  W  G  R  G  T  L  V  T  V  S  S  
                    Query_1380   272  GTCTATTACTGTGCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  359
V  90.9% (261/287)  IGHV1-18*01  277  ..G..............-----------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                          
D  100.0% (7/7)     IGHD3-10*01  6    ----------------------.......-----------------------------------------------------------  12
J  96.2% (51/53)    IGHJ2*01     1    -----------------------------------..........T.....C....................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_264684

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           315     5e-88
IGHD3-16*01                                                                                           12.2    32   
IGHJ2*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGCCG	TGGGGG	CATCAAGGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGCCGTGGGGGCATCAAGGGATCCTGGTACTCCGATCTC	RESAVGASRDPGTPIS	242	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	127	24	14	9	1	58.3
FR3-IMGT	128	241	114	107	7	0	93.9
CDR3-IMGT (germline)	242	248	7	7	0	0	100
Total	N/A	N/A	249	227	21	1	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1381   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGACATGAGATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.2% (227/249)  IGHV3-48*03  47   ..............................................TT....A.....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  P   L  V  V  L  L  Y  T  T  Q  T  L  *  R  A  D  S  P  S  P  E  T  T  P 
                    Query_1381   91   AGTGGGTTTCACACATTCC-ACTGGTAGTACTCTTATACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  179
V  91.2% (227/249)  IGHV3-48*03  137  ...........T.....AGT.G.A..G...G.ACC...T..................................................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                       R  I  L  S  I  Y  K  *  T  A  *  E  P  R  T  R  L  F  I  T  V  R  E  S  A  V  G  A  S  R 
                    Query_1381   180  AGAATTCTCTCTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGAGAGTCCGCCGTGGGGGCATCAAGG  269
V  91.2% (227/249)  IGHV3-48*03  227  ....C..A..G.....G.................................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------------......--------  22

                                      T------------------>                                  
                                       D  P  G  T  P  I  S  G  A  V  A  P  W  S  L  S  P  Q 
                    Query_1381   270  GATCCTGGTACTCCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCCCAG  323
J  96.0% (48/50)    IGHJ2*01     4    ----........T.....................................T...  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_264687

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_1382   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_1382   91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_1382   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_1382   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_264686

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           360     1e-101
IGHD6-19*01                                                                                           21.8    0.040 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCAGG	GCAGTGGCTGG	CACG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTC	ARVPGQWLARGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	238	8	0	96.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1383   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.7% (238/246)  IGHV3-53*01  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  M  Y  S  G  G  T  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_1383   91   AGTGGGTCTCAGTTATGTATAGCGGTGGGACCACATACTATGCAGAGTCCGTGAAGGGCCGATTCACCATCTCAAGAGACAATTCCAAGA  180
V  96.7% (238/246)  IGHV3-53*01  137  ................T...........T.G.........C.....C..........................C................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  G  Q  W  L  A  R  
                    Query_1383   181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGTCCCAGGGCAGTGGCTGGCACGCG  270
V  96.7% (238/246)  IGHV3-53*01  227  ..................................................................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD6-19*01  8    -------------------------------------------------------------------------...........------  18
J  100.0% (46/46)   IGHJ6*02     17   ----------------------------------------------------------------------------------------..  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1383   271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (46/46)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_45038

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           344     6e-97
IGHD6-13*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTGG	GCACCAGCTGG	GCCGGG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTGGGCACCAGCTGGGCCGGGTGACTCC	ARHWAPAGPGDS	267	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	80	30	27	3	0	90
FR2-IMGT	81	131	51	49	2	0	96.1
CDR2-IMGT	132	152	21	16	5	0	76.2
FR3-IMGT	153	266	114	101	13	0	88.6
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	247	27	0	90.1


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  N  L  S  L  I  C  T  V  S  G  A  S  I  S  S  S  H  Y  Y  W  G  W  
                    Query_1384   1    CAGGACTGGTGAAGCCCTCGGAGAACCTGTCCCTCATATGCACTGTCTCTGGTGCCTCCATCAGCAGTAGTCATTACTACTGGGGCTGGA  90
V  90.1% (247/274)  IGHV4-39*01  26   ................T.......C...........CC................G................AG.................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  S  P  G  K  G  L  E  W  I  G  S  I  D  Y  D  G  R  T  F  H  N  P  S  L  K  S  R  
                    Query_1384   91   TCCGCCAGTCCCCAGGGAAGGGCCTGGAGTGGATTGGGAGTATCGATTACGATGGGAGAACCTTCCACAATCCGTCTCTCAAGAGTCGAG  180
V  90.1% (247/274)  IGHV4-39*01  116  ........C.............G.....................T....TAG......C....A.T....C.....C.............  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  V  S  S  D  T  S  K  N  Q  F  S  V  R  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  
                    Query_1384   181  TCACCGTGTCCTCAGACACGTCCAAGAACCAGTTCTCCGTGAGGCTGAGTTCCGTGACCGCCGCAGACACGGCTCTGTATTACTGTGCGA  270
V  90.1% (247/274)  IGHV4-39*01  206  .....A.A...GT.........................C...A......C..T.....................G...............  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------CDR3-IMGT------------>                                  
                                      R  H  W  A  P  A  G  P  G  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1384   271  GACATTGGGCACCAGCTGGGCCGGGTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  336
V  90.1% (247/274)  IGHV4-39*01  296  ....--------------------------------------------------------------  299
                                      R                                                                 
D  90.9% (10/11)    IGHD6-13*01  8    --------...G.......-----------------------------------------------  18
J  95.1% (39/41)    IGHJ4*02     8    -------------------------.....A..............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_45039

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         271     7e-75
IGHD2-2*01                                                                                            19.9    0.15 
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	TGGGGCCT	TACCAGGTGCTAT	CACTT	GACAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGTGGGGCCTTACCAGGTGCTATCACTTGACACC	ATVGPYQVLSLDT	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	12	9	0	57.1
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	249	211	38	0	84.7


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  T  V  S  G  G  S  M  N  T  D  G  Y  S  W  G  W  I  R  Q  P  P  G  Q  G  
                    Query_1385     4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATGAACACTGATGGATACTCTTGGGGCTGGATCCGGCAGCCGCCAGGGCAGGGCC  93
V  84.7% (211/249)  IGHV4-30-2*01  50   .....TCC...A....CG...................C.G..G..G...T.....C...A................A......A......  139
                                           L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  F  G  L  D  T  A  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  
                    Query_1385     94   TGGAGTGGATTGGCTTCGGCTTAGACACTGCGAACACCTACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCGGTGGACAGGTCCA  183
V  84.7% (211/249)  IGHV4-30-2*01  140  .............G.A.AT..ATC.T.G..G..G...............G.......................A..A..A..........  229
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  

                                        -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                        K  K  D  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  V  G  P  Y  Q  V  L  
                    Query_1385     184  AGAAGGACTTCTCCCTGAAGCTAGCCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCCACAGTGGGGCCTTACCAGGTGCTAT  273
V  84.7% (211/249)  IGHV4-30-2*01  230  ....CC.G..............GAG...........................G.............G..---------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD2-2*01     16   -----------------------------------------------------------------------------......C......  28

                                        ---------->                                  
                                        S  L  D  T  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_1385     274  CACTTGACACCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  95.0% (38/40)    IGHJ5*02       12   -----...C...............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_10134

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     3e-115
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGATGGCCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTC	*DNQAMAGPSTVWTS	283	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	144	51	49	1	1	96.1
CDR2-IMGT	145	168	24	21	3	0	87.5
FR3-IMGT	169	282	114	110	4	0	96.5
CDR3-IMGT (germline)	283	290	8	7	1	0	87.5
Total	N/A	N/A	291	277	13	1	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  S  Y
                    Query_1386   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCAGTTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ....................................C.......................................AG.........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  T  G  L  E  W  M  G   S  S  F  R  M  T  L  I  P  D  T  A  
                    Query_1386   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGTGGATGGG-ATCATCTTTCCGGATGACTCTGATACCAGATACAGCCC  179
V  95.2% (277/291)  IGHV5-51*01  96   ................................A..................G.......A...T.G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                      R  P  S  K  A  R  S  P  S  Q  P  T  S  P  S  P  P  P  T  C  S  G  V  A  *  R  P  R  T  P  
                    Query_1386   180  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  269
V  95.2% (277/291)  IGHV5-51*01  186  ............................................G.....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                           
                                      P  S  I  I  V  *  D  N  Q  A  M  A  G  P  S  T  V  W  T  S  G  A  K  G  P  R  S  P  S
                    Query_1386   270  CAAGTATTATTGTGTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  354
V  95.2% (277/291)  IGHV5-51*01  276  ..T......C....C......----------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                   
J  100.0% (42/42)   IGHJ6*02     15   -------------------------------------------..........................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_310146

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AGCCTTTCACA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGAAGCCTTTCACATTGACTAC	GREAFHIDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  R  S  S  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1387   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGGAGTTCTAGCATGACCTGGGTCCGCCAGGCTCCGGGGAAGGGACTGG  90
V  92.0% (230/250)  IGHV3-21*01  47   ....................................C......T..C.A........A..................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  N  S  A  S  N  F  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_1387   91   AGTGGGTCTCATCCATTAATAGTGCTAGTAATTTCATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  92.0% (230/250)  IGHV3-21*01  137  ..................G....AG.....G..A....................................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  V  F  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  F  C  G  R  E  A  F  H  I  D  Y  
                    Query_1387   181  AGAACTCAGTCTTTCTGCAGATGAGCAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGGGAGAGAAGCCTTTCACATTGACTACT  270
V  92.0% (230/250)  IGHV3-21*01  227  ........C.G.A......A....A................................A.....C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------------.........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1387   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (42/42)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_310147

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_1388   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_1388   91   GAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ...................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_1388   181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1388   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_310144

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           422     2e-120
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	CCGCCTTCCCTAGCGACACCGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGCCTTCCCTAGCGACACCGGGTACTTTGACTAC	ARAAFPSDTGYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  D  T  F  T  R  Y
                    Query_1389   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGAGACACCTTCACCAGGTA  90
V  96.6% (280/290)  IGHV1-46*01  6    .........................................................................T.............C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  S  G  A  T  K  Y  A  Q
                    Query_1389   91   CTTTATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTAGTGGAGCCACAAAATACGCACA  180
V  96.6% (280/290)  IGHV1-46*01  96   ..A................................................................G....TAG.....GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  I  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_1389   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAATCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  96.6% (280/290)  IGHV1-46*01  186  .................................................G........................................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  A  A  F  P  S  D  T  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_1389   271  CGTGTATTACTGTGCGAGAGCCGCCTTCCCTAGCGACACCGGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  359
V  96.6% (280/290)  IGHV1-46*01  276  ....................---------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                       
J  97.8% (45/46)    IGHJ4*02     3    -------------------------------------------.......................................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_281364

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD3-3*01                                                                                            23.8    0.011
IGHJ2*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCAATCGAGGC	TTTTGGAGTGGT	CGGGGACCCCGGATCGC	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCAATCGAGGCTTTTGGAGTGGTCGGGGACCCCGGATCGCTACTTCGATCTC	AREQSRLLEWSGTPDRYFDL	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_1390   1    ACCCTGTCCCTCACCTGCACTGTCTCGGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATTCGGCAGGCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ..........................T...................................C......C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  Y  S  R  G  R  T  N  Y  N  P  A  L  T  A  R  V  T  I  S  A  D  S  S  K  N 
                    Query_1390   91   TGGATTGGATATTTCTATAGCAGAGGCAGGACGAACTACAACCCCGCCCTCACGGCTCGAGTCACCATATCAGCAGACTCGTCCAAGAAC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G...A.....TA...T..G..C..C............T......A.AG.................T....A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  F  Y  Y  C  A  R  E  Q  S  R  L  L  E  W  S 
                    Query_1390   181  CAGTTCTCCCTGAAGCTCAGCTCTGTTACCGCTGCGGACACGGCCTTTTATTACTGTGCGAGAGAGCAATCGAGGCTTTTGGAGTGGTCG  270
V  91.4% (224/245)  IGHV4-59*01  229  .................G........G..................G.G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD3-3*01   11   ----------------------------------------------------------------------------............--  22

                                      GT------------------------>                                  
                                       G  T  P  D  R  Y  F  D  L  W  G  R  G  A  Q  V  T  V  S  S  
                    Query_1390   271  GGGACCCCGGATCGCTACTTCGATCTCTGGGGCCGTGGCGCCCAGGTCACTGTCTCCTCAG  331
J  95.7% (44/46)    IGHJ2*01     8    ---------------........................A...T.................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_281363

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-24*01                                                                                           422     2e-120
IGHD4-17*01                                                                                           19.9    0.17  
IGHJ3*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-24*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	GAT	CTACGGTGAC	CGAAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATCTACGGTGACCGAAATGATGCTTTTGATATC	AIYGDRNDAFDI	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	75	69	65	4	0	94.2
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	112	2	0	98.2
CDR3-IMGT (germline)	289	290	2	2	0	0	100
Total	N/A	N/A	284	277	7	0	97.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T  E  L 
                    Query_1391   7    CAGCTGGTGCAGTCTGGAGTTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAGTTA  96
V  97.5% (277/284)  IGHV1-24*01  7    ........A........G.C...G..............................................................A...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T  E  L 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  I  Y  A  Q 
                    Query_1391   97   TCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGATGGTGAAACAATCTACGCACAG  186
V  97.5% (277/284)  IGHV1-24*01  97   ..........................................................................................  186
                                       S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  I  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  E  D  A  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 
                    Query_1391   187  AAGTTCCAGGGCAGAGTCACCATGACCGAGGACGCATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCC  276
V  97.5% (277/284)  IGHV1-24*01  187  .................................A........................................................  276
                                       K  F  Q  G  R  V  T  M  T  E  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  I  Y  G  D  R  N  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1391   277  GTCTATTACTGTGCGATCTACGGTGACCGAAATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  358
V  97.5% (277/284)  IGHV1-24*01  277  ..G...........--------------------------------------------------------------------  290
                                       V  Y  Y  C  A                                                                    
D  100.0% (10/10)   IGHD4-17*01  4    -----------------..........-------------------------------------------------------  13
J  100.0% (50/50)   IGHJ3*02     1    --------------------------------..................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_310143

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD6-13*01                                                                                           18.0    0.55  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CACG	AGCAGCTGG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACACGAGCAGCTGGATTGACTAC	ARDTSSWIDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1392   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ...............................G...........G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  T  G  S  T  N  Y  N  P  S  L  K  S  Q  F  T  I  S  V  D  T  S  K  N 
                    Query_1392   91   TGGATTGGGTATATCTTTTACACTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCAATTCACCATATCAGTAGACACGTCGAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  ................A.....G...................................G.G......................C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  S  S  W  I  D  Y  W 
                    Query_1392   181  CAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACACGAGCAGCTGGATTGACTACTGG  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-13*01  10   ---------------------------------------------------------------------.........------------  18
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------...........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_1392   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (42/42)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_310140

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD3-16*01                                                                                           10.3    114  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GCAGAG	ATGAT	N/A	TACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCAGAGATGATTACCTTGACTCC	ASRDDYLDS	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	226	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  S  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1393   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTCTGCCATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (226/246)  IGHV3-23*01  47   ................................................A........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  N  G  R  G  S  R  T  D  Y  A  Y  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_1393   91   AGTGGGTCTCCAGTGTTAATGGTAGGGGTTCTAGGACGGACTACGCATACTCCGTGAAGGGCCGGCTCACCATCTCCAGAGACAATTCCA  180
V  91.9% (226/246)  IGHV3-23*01  137  ..........AGC.A...G......T...GG...C..AT........G.................T........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  T  L  Y  L  E  M  S  S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  R  D  D  Y  L  D  S  
                    Query_1393   181  AGAACACGCTGTATCTGGAAATGAGCAGCCTGAGAGTCGAGGACACGGCCGTATATTATTGTGCGAGCAGAGATGATTACCTTGACTCCT  270
V  91.9% (226/246)  IGHV3-23*01  227  .................C......A...........C.....................C.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD3-16*01  6    ------------------------------------------------------------------------.....-------------  10
J  93.5% (43/46)    IGHJ4*02     3    -----------------------------------------------------------------------------...T......A..  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1393   271  GGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  303
J  93.5% (43/46)    IGHJ4*02     16   ............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_281360

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           329     3e-92
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCGA	TCGGCGCGGA	TCGGGGAG	CCTATTGTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACCGATCGGCGCGGATCGGGGAGCCTATTGTCCTACTACTACGCTATGGACGTC	TTDRRGSGSLLSYYYAMDV	249	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	24	6	0	80
FR3-IMGT	135	248	114	101	13	0	88.6
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	233	23	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1394   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAAGGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.0% (233/256)  IGHV3-15*01  47   .......T......................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  H  I  K  S  R  A  D  G  G  T  T  D  Y  A  A  P  V  R  G  R  Y  T  I  S  R  D  
                    Query_1394   91   AGTGGGTTGGCCATATTAAAAGCAGAGCGGACGGTGGAACCACAGACTACGCTGCACCCGTGAGAGGAAGATACACCATCTCAAGAGATG  180
V  91.0% (233/256)  IGHV3-15*01  137  ............G...........A.A.T..T.....G..A......................A...C....T.................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  R  N  T  L  F  L  Q  M  N  S  L  R  T  E  D  T  G  V  F  Y  C  T  T  D  R  R  G  S  
                    Query_1394   181  ATTCAAGAAACACGTTGTTTCTTCAGATGAACAGCCTGAGGACCGAGGACACAGGCGTCTTTTACTGTACCACCGATCGGCGCGGATCGG  270
V  91.0% (233/256)  IGHV3-15*01  227  ......A.......C...A...G..A.............AA.............C...G.A............A..--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (8/8)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      --CDR3-IMGT----------------------->                                 
                                      G  S  L  L  S  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_1394   271  GGAGCCTATTGTCCTACTACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  338
D  100.0% (8/8)     IGHD3-10*01  18   ....----------------------------------------------------------------  21
J  96.4% (53/55)    IGHJ6*02     8    -------------...........G...............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_106699

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	ATTTCTTAGGG	GCTCGTC	AGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACATTTCTTAGGGGCTCGTCAGGCTTTCACTAC	TFLRGSSGFHY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	101	13	0	88.6
CDR3-IMGT (germline)	249	250	2	2	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  D  L  D  W  V  R  Q  A  S  G  K  G  L  
                    Query_1395   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGATTTGGACTGGGTCCGCCAGGCTTCCGGGAAAGGCCTGG  90
V  90.8% (227/250)  IGHV3-73*01  47   .........A.........................................C.A..C............................G....  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  M  R  T  K  D  D  N  Y  A  T  L  Y  A  A  S  V  R  G  R  F  T  I  S  R  D  
                    Query_1395   91   AGTGGGTTGGCCGTATGAGAACCAAAGATGACAATTACGCGACACTATATGCTGCGTCGGTGAGAGGCAGGTTCACCATCTCCAGAGATG  180
V  90.8% (227/250)  IGHV3-73*01  137  ................T....G.....C.A...G..........GC.................A..........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  N  M  A  Y  L  Q  M  S  G  L  D  T  E  D  T  A  L  Y  F  C  T  F  L  R  G  S  S  
                    Query_1395   181  ATTCAAAGAACATGGCTTATCTGCAAATGAGCGGCCTGGACACCGAGGACACGGCCCTTTACTTCTGTACATTTCTTAGGGGCTCGTCAG  270
V  90.8% (227/250)  IGHV3-73*01  227  ............C...G.............A.A.....A.A...............G.G..T.A......--------------------  296
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------.......--  17

                                      ---------->                                  
                                      G  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1395   271  GCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (43/44)    IGHJ4*02     5    -....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_318023

Length=407
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD2-8*02                                                                                            18.0    0.69  
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTACA	TGGCGATGA	TACTGGTGG	CTACCTTTACTTCCT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTACATGGCGATGATACTGGTGGCTACCTTTACTTCCTCTACGGTATGGACGTC	AVHGDDTGGYLYFLYGMDV	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	73	1	0	98.6
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	105	9	0	92.1
CDR3-IMGT (germline)	292	299	8	6	2	0	75
Total	N/A	N/A	295	275	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  
                    Query_1396   5    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCCA  94
V  93.2% (275/295)  IGHV5-51*01  2    ....G.................................................................................A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  
                    Query_1396   95   CTTATTGGATTGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACA  184
V  93.2% (275/295)  IGHV5-51*01  92   GC..C.....C.G.................................................T.................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  G  D  K  S  F  S  T  A  Y  L  Q  W  G  G  L  G  A  S  D  
                    Query_1396   185  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGGCGACAAGTCCTTCAGCACCGCCTACCTGCAGTGGGGCGGCCTGGGGGCCTCGGACA  274
V  93.2% (275/295)  IGHV5-51*01  182  ...........C.....................C..........A.......................A..A.....AA...........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  F  A  V  H  G  D  D  T  G  G  Y  L  Y  F  L  Y  G  M  D  V  W  G  Q  G  T  
                    Query_1396   275  CCGCCATCTATTACTTTGCGGTACATGGCGATGATACTGGTGGCTACCTTTACTTCCTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  364
V  93.2% (275/295)  IGHV5-51*01  272  .......G.......G....AG...-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (9/9)     IGHD2-8*02   10   ----------------------------------.........-----------------------------------------------  18
J  98.0% (48/49)    IGHJ6*02     14   ----------------------------------------------------------................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_1396   365  CGGTCACCGTCTCGTCA  381
J  98.0% (48/49)    IGHJ6*02     46   .............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39867768


Query= Query_281369

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           371     7e-105
IGHD2-15*01                                                                                           21.8    0.043 
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGGGTATTCTGTTGC	GGTGGTAGGTGCTA	GTG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGGGTATTCTGTTGCGGTGGTAGGTGCTAGTGACAACTGGTTCGACCCC	ARHGGYSVAVVGASDNWFDP	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  I  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_1397   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATAGTATTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  97.2% (244/251)  IGHV4-39*01  49   .........................................C.G.....G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1397   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  97.2% (244/251)  IGHV4-39*01  139  ..........................................................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  V  S  L  K  L  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  H  G  G  Y  S  V  A 
                    Query_1397   181  AAGAATCAGGTCTCCCTGAAGCTGAGCTCTATGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATGGCGGGTATTCTGTTGCG  270
V  97.2% (244/251)  IGHV4-39*01  229  .....C...T....................G........................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD2-15*01  14   -----------------------------------------------------------------------------------------.  14

                                      DR3-IMGT------------------------>                                  
                                       V  V  G  A  S  D  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1397   271  GTGGTAGGTGCTAGTGACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  337
D  92.9% (13/14)    IGHD2-15*01  15   .......C.....------------------------------------------------------  27
J  100.0% (51/51)   IGHJ5*02     1    ----------------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_310149

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           380     1e-107
IGHD5-18*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	GGATACACCTATGGT	CA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGATACACCTATGGTCATGACTAC	AREGYTYGHDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  F  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  G  P  F  S  S  Y
                    Query_1398   1    GCAGCTGGTGCAGTCTGGAGCCGAGTTTAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGCAAGGCCTCTGGCGGCCCCTTCAGCAGTTA  90
V  91.8% (267/291)  IGHV1-69*01  6    ..................G..T...G.G......................A...............T.....A...A..........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  I  R  Q  A  P  G  L  G  L  E  W  M  G  G  I  I  P  I  L  G  P  A  N  Y  A  V
                    Query_1398   91   CGCTATTAGCTGGATTCGACAGGCCCCTGGACTAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCCTTGGTCCAGCAAACTACGCAGT  180
V  91.8% (267/291)  IGHV1-69*01  96   T.....C......G.G................A..................................T.....A..............CA  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  L  E  V  K  S  L  R  S  E  D  T  A
                    Query_1398   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACTTGGAGGTGAAAAGCCTGCGATCTGAGGACACGGC  270
V  91.8% (267/291)  IGHV1-69*01  186  .......................................................A.....C...GC......A................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                
                                        V  Y  Y  C  A  R  E  G  Y  T  Y  G  H  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1398   271  CGTGTATTATTGTGCGAGAGAAGGATACACCTATGGTCATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  348
V  91.8% (267/291)  IGHV1-69*01  276  .........C...........---------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                            
D  93.3% (14/15)    IGHD5-18*01  3    ----------------------.......G.......-----------------------------------------  17
J  100.0% (39/39)   IGHJ4*02     8    ---------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_41628

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           297     7e-83
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GATAG	N/A	N/A	GTGCGGGATGGCAACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGATAGGTGCGGGATGGCAACCTGACTAC	VIGAGWQPDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	5	2	0	71.4
Total	N/A	N/A	244	217	27	0	88.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  S  G  Y  Y  L  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1399   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTGAGTGGTTATTATTTGAACTGGATCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  88.9% (217/244)  IGHV4-59*01  49   ....................................A.C...A....C..C.G..G.........G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  L  I  S  Y  T  G  S  T  N  Y  N  P  S  L  Q  S  R  V  I  I  S  V  D  T  S  K  N 
                    Query_1399   91   TGGCTTGGTTTAATCTCTTACACCGGGAGTACCAACTACAACCCCTCCCTCCAGAGTCGAGTCATCATATCGGTAGACACGTCCAAGAAC  180
V  88.9% (217/244)  IGHV4-59*01  139  ...A....G.AT....A.....GT.....C.....................A............C......A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  V  I  G  A  G  W  Q  P  D  Y  W 
                    Query_1399   181  CAGTTCTCCCTGAGGTTGAGCTCTGTGACCGCTGCGGACACGGCCCTATATTATTGTGTGATAGGTGCGGGATGGCAACCTGACTACTGG  270
V  88.9% (217/244)  IGHV4-59*01  229  .............A.C.............................G.G.....C....C..G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  95.1% (39/41)    IGHJ4*02     8    --------------------------------------------------------------------------------..........  17

                                                                     
                                       G  P  G  T  L  V  T  V  S  S  
                    Query_1399   271  GGCCCGGGAACGCTGGTCACCGTCTCCTCAG  301
J  95.1% (39/41)    IGHJ4*02     18   ....A......C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_222568

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           260     1e-71
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	93	21	0	81.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	205	39	0	84


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_1400   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  84.0% (205/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_1400   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  84.0% (205/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_1400   181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCACGTAT  270
V  84.0% (205/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_1400   271  GTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    ---------------------------------...G....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_222569

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         434     4e-124
IGHD2-21*02                                                                                           50.7    9e-11 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTGG	GCATATTGTGGTGGTGACTGCTATTC	AC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTGGGCATATTGTGGTGGTGACTGCTATTCACTTGACTAC	ARWAYCGGDCYSLDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	283	5	0	98.3


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_1401     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGCGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTA  90
V  98.3% (283/288)  IGHV5-10-1*01  6    .................................................A....................................G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  C  Q  M  P  G  Q  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_1401     91   CTGGATCAGCTGGGTGTGCCAGATGCCCGGGCAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  98.3% (283/288)  IGHV5-10-1*01  96   ................C..............A..........................................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1401     181  GTCCTTCCAAGGCCACGTCACCGTCTCAGCTGACAAGTCCATCAGCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (283/288)  IGHV5-10-1*01  186  ......................A...................................................................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          M  Y  Y  C  A  R  W  A  Y  C  G  G  D  C  Y  S  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1401     271  CATGTATTACTGTGCGAGGTGGGCATATTGTGGTGGTGACTGCTATTCACTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  98.3% (283/288)  IGHV5-10-1*01  276  ..................------------------------------------------------------------------------  293
                                          M  Y  Y  C  A                                                                           
D  100.0% (26/26)   IGHD2-21*02    2    ----------------------..........................------------------------------------------  27
J  100.0% (42/42)   IGHJ4*02       7    --------------------------------------------------........................................  46

                                          
                                          
                    Query_1401     361  AG  362
J  100.0% (42/42)   IGHJ4*02       47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_327229

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            313     1e-87
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATC	TAGCAACACCTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGCAACACCTGGTACTCGGGGTTTTGACTAC	ARHLATPGTRGFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	56	27	22	5	0	81.5
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	16	5	0	76.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	224	24	0	90.3


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  V  G  S  I  T  S  A  N  W  W  S  W  V  R  Q  P  P  G  R  G  
                    Query_1402   1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTGTTGGCTCCATCACCAGTGCTAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAGGGGGC  90
V  90.3% (224/248)  IGHV4-4*02   47   ..A.....TCC...A...............G...........G....AG...C...............................A.....  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  F  L  G  G  R  S  N  Y  S  P  S  L  E  S  R  V  T  L  S  I  D  T  S  
                    Query_1402   91   TGGAGTGGATTGGGGAAATCTTTCTTGGTGGGAGGTCCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCCTGTCAATAGACACGTCCA  180
V  90.3% (224/248)  IGHV4-4*02   137  .....................A..A.A.......CA.........A..........A..............A.A...G......A.....  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  A  T  P  G  T  
                    Query_1402   181  AGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGAGACATCTAGCAACACCTGGTACTC  270
V  90.3% (224/248)  IGHV4-4*02   227  ..................A.................................G...............----------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD6-13*01  6    ------------------------------------------------------------------------.....G..G.......--  21

                                      ------------->                                  
                                      R  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1402   271  GGGGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (43/43)   IGHJ4*02     6    -----...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_327228

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD4-17*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGTATCT	TACGGTGAC	CCCACAAGTTACTCACGGTG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGGGTATCTTACGGTGACCCCACAAGTTACTCACGGTGTTGACTTC	VKGYLTVTPQVTHGVDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  V  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1403   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCGTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-23*01  47   ....................................C.T......G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  I  S  G  A  Y  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_1403   91   AGTGGGTCTCATCTATTAGTATTAGTGGTGCTTACACATACTACGTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAGTTCCA  180
V  94.4% (235/249)  IGHV3-23*01  137  ...........G........GG........G.AG...........C......................................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  I  Y  Y  C  V  K  G  Y  L  T  V  T  P  
                    Query_1403   181  AGAACACGCTGTATCTGCAAATGAGCAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGTGAAAGGGTATCTTACGGTGACCCCAC  270
V  94.4% (235/249)  IGHV3-23*01  227  ........................A.........................G............C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD4-17*01  5    ----------------------------------------------------------------------------.........-----  13

                                      GT-------------------->                                  
                                      Q  V  T  H  G  V  D  F  W  G  L  G  T  L  A  T  V  S  S  
                    Query_1403   271  AAGTTACTCACGGTGTTGACTTCTGGGGCCTGGGAACCCTGGCCACCGTCTCCTCAG  327
J  92.9% (39/42)    IGHJ4*02     7    ---------------......A........A...........T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_65162

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTTTATTACCT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTATTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_1404   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTTCCACTTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ..............................................................................C...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  P
                    Query_1404   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAGTCC  180
V  95.2% (277/291)  IGHV5-51*01  96   C.......G.................................................T.................A..........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_1404   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .......C.....................C...............C...........................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_1404   271  CATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTATTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD1-26*01  4    -----------------------------...G....A.....-----------------------------------------------  17
J  98.0% (48/49)    IGHJ6*02     14   ------------------------------------------------------....................................  49

                                                   
                                        T  V  S  S 
                    Query_1404   361  CACCGTCTCGTCA  373
J  98.0% (48/49)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_65163

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GGGCATCAGTGC	CTATGGTTCGGGGAG	CGC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGGGCATCAGTGCCTATGGTTCGGGGAGCGCTATGGACGTC	VKGISAYGSGSAMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1405   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCCATGCCATGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (230/247)  IGHV3-23*01  47   ...........................................C...T...................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  N  G  G  T  T  H  Y  A  D  S  V  Q  G  R  S  I  I  S  R  D  N  S  
                    Query_1405   91   AGTGGGTCTCAGTTATTAGTGGCAATGGTGGTACCACACATTACGCAGACTCCGTGCAGGGCCGGTCCATCATCTCCAGAGACAATTCCA  180
V  93.1% (230/247)  IGHV3-23*01  137  ............C.........T.G........G....T.C...............A.........T..C....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  T  L  R  A  G  D  T  A  V  Y  Y  C  V  K  G  I  S  A  Y  G  S  
                    Query_1405   181  AGAACACCTTGTATCTGCAAATGAACACCCTGAGAGCCGGGGACACGGCCGTATATTACTGTGTGAAGGGCATCAGTGCCTATGGTTCGG  270
V  93.1% (230/247)  IGHV3-23*01  227  .......GC..................G...........A.......................C...-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (15/15)   IGHD3-10*01  7    -------------------------------------------------------------------------------...........  17

                                      ---------------->                                 
                                      G  S  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1405   271  GGAGCGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
D  100.0% (15/15)   IGHD3-10*01  18   ....----------------------------------------------  21
J  100.0% (43/43)   IGHJ6*02     20   -------...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_222562

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-10*01                                                                                           12.2    33   
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCATGTCCCC	ATTACT	TCCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCATGTCCCCATTACTTCCATTGACTTC	ARAHVPITSIDF	261	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	18	3	0	85.7
FR3-IMGT	147	260	114	103	11	0	90.4
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	245	22	0	91.8


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  I  V  S  G  G  A  I  S  G  Y  Y  W  T  W  I  R  
                    Query_1406   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACGTGCATTGTCTCTGGTGGCGCCATCAGTGGTTATTACTGGACCTGGATCCGGC  90
V  91.8% (245/267)  IGHV4-59*01  26   ................T....................C....C.............T........A....C.......G...........  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  N  G  N  T  D  Y  N  P  S  L  K  S  R  V  T  
                    Query_1406   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGCTATATCTATTACAATGGAAACACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  91.8% (245/267)  IGHV4-59*01  116  ...............................G.............G...G.G....A.................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  L  D  T  S  K  K  H  F  S  L  K  M  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  
                    Query_1406   181  TTTCACTAGACACGTCGAAGAAACACTTCTCCCTGAAGATGACCTCCATGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCC  270
V  91.8% (245/267)  IGHV4-59*01  206  .A...G..........C.....C..G............C...G...TG......................G................---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      ----CDR3-IMGT------------>                                 
                                      H  V  P  I  T  S  I  D  F  W  G  L  G  T  L  V  T  V  S  S 
                    Query_1406   271  ATGTCCCCATTACTTCCATTGACTTCTGGGGCCTGGGAACCCTGGTCACCGTCTCGTCA  329
D  100.0% (6/6)     IGHD3-10*01  3    --------......---------------------------------------------  8
J  92.7% (38/41)    IGHJ4*02     7    ------------------......A........A.....................C...  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_93573

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*08                                                                                           305     4e-85
IGHD1-26*01                                                                                           12.2    36   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*08	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTCTGGATCTCT	TGGGAG	GCGACAC	TGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCTGGATCTCTTGGGAGGCGACACTGACGAC	ATLDLLGGDTDD	292	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	68	6	0	91.9
CDR1-IMGT	79	102	24	18	6	0	75
FR2-IMGT	103	153	51	42	9	0	82.4
CDR2-IMGT	154	177	24	17	7	0	70.8
FR3-IMGT	178	291	114	94	20	0	82.5
CDR3-IMGT (germline)	292	295	4	4	0	0	100
Total	N/A	N/A	291	243	48	0	83.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  A  G  S  T  V  K  V  S  C  K  T  S  R  A  T  F  S  
                    Query_1407   5    AGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGGCTGGGTCCACGGTGAAGGTCTCCTGCAAGACTTCCAGGGCCACCTTCAGCA  94
V  83.5% (243/291)  IGHV1-69*08  2    .............G..A.....................C........T....................G....TG.A.G...........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  N  T  F  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  A  I  I  P  T  L  R  T  T  N  Y  
                    Query_1407   95   GCAACACCTTCACTTGGGTGCGCCAGGCCCCGGGACAAGGGCTTGAGTGGATGGGGGCCATCATCCCCACCCTGCGCACGACAAACTACG  184
V  83.5% (243/291)  IGHV1-69*08  92   ..T.T..TA...GC........A........T.......................AAGG........T.T...TG.T..AG.........  181
                                      S  Y  T  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  T  A  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  R  F  Q  G  R  V  T  I  T  A  D  R  S  S  S  T  S  Y  M  G  L  S  G  L  T  P  E  D  
                    Query_1407   185  CACAGAGGTTCCAAGGCAGAGTCACCATAACCGCGGACAGGTCTTCGAGTACAAGTTATATGGGACTGAGCGGTCTGACTCCTGAGGACA  274
V  83.5% (243/291)  IGHV1-69*08  182  ......A......G...........G..T..........AA..CA....C...GCC..C....AG......A.C....GAT.........  271
                                      A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  V  Y  Y  C  A  T  L  D  L  L  G  G  D  T  D  D  W  G  P  G  T  L  V  T  V  S  S  
                    Query_1407   275  CGGCCGTGTATTACTGTGCGACTCTGGATCTCTTGGGAGGCGACACTGACGACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  361
V  83.5% (243/291)  IGHV1-69*08  272  .....................------------------------------------------------------------------  292
                                      T  A  V  Y  Y  C  A                                                                    
D  100.0% (6/6)     IGHD1-26*01  8    ---------------------------------......------------------------------------------------  13
J  95.1% (39/41)    IGHJ4*02     8    ----------------------------------------------....T.........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_222560

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         361     4e-102
IGHJ3*02                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ATGGGCGCAGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGCGCAGATGATGCTTTTGATATC	ARMGADDAFDI	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	24	0	0	100
FR2-IMGT	51	101	51	51	0	0	100
CDR2-IMGT	102	125	24	24	0	0	100
FR3-IMGT	126	239	114	114	0	0	100
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	231	231	0	0	100


Alignments

                                         <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                          C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 
                     Query_1408     15   TGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATA  104
V  100.0% (231/231)  IGHV3-30-3*01  64   ..........................................................................................  153
                                          C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                         -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                          S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 
                     Query_1408     105  TCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTG  194
V  100.0% (231/231)  IGHV3-30-3*01  154  ..........................................................................................  243
                                          S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                         --------------------------------------------><-----------CDR3-IMGT----------->            
                                          Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  M  G  A  D  D  A  F  D  I  W  G  Q  G 
                     Query_1408     195  CAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAATGGGCGCAGATGATGCTTTTGATATCTGGGGCCAAGGG  284
V  100.0% (231/231)  IGHV3-30-3*01  244  ...................................................---------------------------------------  294
                                          Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
J  100.0% (50/50)    IGHJ3*02       1    --------------------------------------------------------------............................  28

                                                               
                                          T  M  V  T  V  S  S  
                     Query_1408     285  ACAATGGTCACCGTCTCTTCAG  306
J  100.0% (50/50)    IGHJ3*02       29   ......................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_93571

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           327     9e-92
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAG	GTCGAGGGAG	TGACTACGGT	AGACT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGGTCGAGGGAGTGACTACGGTAGACTCTACTTTGACTAC	AKGRGSDYGRLYFDY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	101	51	44	4	3	86.3
CDR2-IMGT	102	125	24	19	5	0	79.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	249	231	15	3	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  I  S  W  V  R  R  A  P  G  K  G  L  
                    Query_1409   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATGCCATCAGCTGGGTCCGCCGGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-23*01  47   ...........................................C.G.........G.............A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S     M  I  G  G  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1409   91   AATGGATCTCA---ATGATTGGTGGTGGTGGAACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  177
V  92.8% (231/249)  IGHV3-23*01  137  .G...G.....GCT..T.G....A.......T.G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  G  R  G  S  D  Y  G  
                    Query_1409   178  AGAACACCCTGTATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCCAAAGGTCGAGGGAGTGACTACGGTA  267
V  92.8% (231/249)  IGHV3-23*01  227  .......G...............A..........................G.............G....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD4-17*01  1    -------------------------------------------------------------------------------..........-  10

                                      ---------------->                                  
                                      R  L  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1409   268  GACTCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (47/47)   IGHJ4*02     2    ----...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_222566

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           383     1e-108
IGHD3-10*01                                                                                           14.1    9.3   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	N/A	TTCGGGG	TGGGGGGAACTCGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGTTCGGGGTGGGGGGAACTCGGGGACTACTTTGACTAC	ASSGWGELGDYFDY	281	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	166	21	16	5	0	76.2
FR3-IMGT	167	280	114	105	9	0	92.1
CDR3-IMGT (germline)	281	285	5	4	1	0	80
Total	N/A	N/A	285	265	20	0	93


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N
                    Query_1410   1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAA  90
V  93.0% (265/285)  IGHV3-53*01  6    ..........G...............................................................................  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  S  W  V  R  Q  A  P  G  K  R  L  E  W  V  S  S  I  F  S  N  G  N  T  Y  Y  T  D  S
                    Query_1410   91   CTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGAGGCTGGAGTGGGTCTCAAGCATTTTTAGTAATGGTAACACATACTACACAGACTC  180
V  93.0% (265/285)  IGHV3-53*01  96   ..................................G.................GTT....A...CGG.....G..........G.......  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  V  Y  L  Q  V  H  S  R  R  A  G  D  T  A  V
                    Query_1410   181  CGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGGTGTATCTTCAGGTGCACAGCCGGAGGGCCGGGGACACGGCCGT  270
V  93.0% (265/285)  IGHV3-53*01  186  ..............................................C..........AA..A......T...A....A............  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><----------------CDR3-IMGT--------------->                                  
                                        F  Y  C  A  S  S  G  W  G  E  L  G  D  Y  F  D  Y  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_1410   271  GTTTTACTGTGCAAGTTCGGGGTGGGGGGAACTCGGGGACTACTTTGACTACTGGGGCCAGGGATCCCTGGTCATCGTCTCCTCAG  356
V  93.0% (265/285)  IGHV3-53*01  276  ..A.........G..-----------------------------------------------------------------------  290
                                        Y  Y  C  A                                                                          
D  100.0% (7/7)     IGHD3-10*01  13   ---------------.......----------------------------------------------------------------  19
J  95.8% (46/48)    IGHJ4*02     1    --------------------------------------..........................A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_222567

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           416     2e-118
IGHD3-16*01                                                                                           12.2    36    
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGA	AATTGGTAACACCTAATTGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTC	ARRGKLVTPNWDYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	277	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_1411   2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAC  91
V  96.2% (277/288)  IGHV1-18*04  7    ...................C.................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  C  Y  N  G  N  T  K  Y  A  L 
                    Query_1411   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGTTGTTACAATGGCAACACAAAGTATGCACTG  181
V  96.2% (277/288)  IGHV1-18*04  97   ...........................................................CGC.........T........C.......A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  H  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_1411   182  AAGCACCAGGGCAGAGTCACCATGACCACAGACACATCGACGAGCACAGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.2% (277/288)  IGHV1-18*04  187  ....T.................................C..............C....................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------CDR3-IMGT-------------------->                           
                                       V  Y  Y  C  A  R  R  G  K  L  V  T  P  N  W  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_1411   272  GTGTATTACTGTGCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  361
V  96.2% (277/288)  IGHV1-18*04  277  ..................------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD3-16*01  18   -------------------......-----------------------------------------------------------------  23
J  100.0% (50/50)   IGHJ6*02     13   ----------------------------------------------............................................  56

                                            
                                       S  S 
                    Query_1411   362  TCCTCA  367
J  100.0% (50/50)   IGHJ6*02     57   ......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_222564

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           399     3e-113
IGHD3-22*01                                                                                           18.0    0.67  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCGTCG	TGATAGTTATGGTTA	CC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGCGTCGTGATAGTTATGGTTACCACTTTGACCGC	ARGRRDSYGYHFDR	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	67	4	0	94.4
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	110	4	0	96.5
CDR3-IMGT (germline)	292	298	7	6	1	0	85.7
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  G  T  F  R  S  
                    Query_1412   8    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAGGGTCTCCTGCAAGGCCTCTGGAGGCACCTTCAGAAGCT  97
V  93.8% (273/291)  IGHV1-69*01  5    ...................G.......................C.......A...............T.................C....  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  V  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  T  G  G  I  I  P  L  F  G  T  P  N  Y  A  
                    Query_1412   98   ATGTCATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGACGGGAGGGATCATCCCTCTGTTTGGCACACCAAACTACGCAC  187
V  93.8% (273/291)  IGHV1-69*01  95   ...CT....G......................................T................A.C.....T...G............  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  M  S  T  T  Y  M  E  L  S  S  L  R  S  E  D  T  
                    Query_1412   188  AGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCTATGAGCACAACTTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGG  277
V  93.8% (273/291)  IGHV1-69*01  185  ........................................C.C.......G.C.....................................  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                  
                                      A  V  Y  Y  C  A  R  G  R  R  D  S  Y  G  Y  H  F  D  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1412   278  CCGTGTATTACTGTGCGCGAGGGCGTCGTGATAGTTATGGTTACCACTTTGACCGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  367
V  93.8% (273/291)  IGHV1-69*01  275  .................A...---------------------------------------------------------------------  295
                                      A  V  Y  Y  C  A  R                                                                       
D  86.7% (13/15)    IGHD3-22*01  10   ----------------------------.......AG......-----------------------------------------------  24
J  95.6% (43/45)    IGHJ4*02     4    ---------------------------------------------........TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_93575

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         364     5e-103
IGHD3-22*01                                                                                           48.8    3e-10 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	AC	TTACTATGATAGTAGTGGTTATTAC	CTTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACTTACTATGATAGTAGTGGTTATTACCTTAACTACTTTGACCAC	ARTYYDSSGYYLNYFDH	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  R  V  S  I  R  S  G  G  Y  Y  *  S  W  I  R  Q  P  P  G  K  G 
                    Query_1413     1    ACCCTGTCCCTCACCTGCGCTGTCTCTCGTGTCTCCATCAGAAGTGGTGGTTACTACTAGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  96.8% (241/249)  IGHV4-30-4*01  49   ..................A........G...G.........C.......A........G...............................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1413     91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  96.8% (241/249)  IGHV4-30-4*01  139  ..........................................................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  A  A  V  S  Y  C  A  R  T  Y  Y  D  S  S  G 
                    Query_1413     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACGCGGCCGTGTCTTACTGTGCCAGAACTTACTATGATAGTAGTGGT  270
V  96.8% (241/249)  IGHV4-30-4*01  229  .............................................A.........A.............---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (25/25)   IGHD3-22*01    4    -----------------------------------------------------------------------...................  22

                                        MGT-------------------->                                  
                                         Y  Y  L  N  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1413     271  TATTACCTTAACTACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  100.0% (25/25)   IGHD3-22*01    23   ......----------------------------------------------------  28
J  97.9% (47/48)    IGHJ4*02       1    ----------...........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_82135

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           355     3e-100
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCT	TTACTATGATAGTAGTGCTTA	CTATGCCTCTTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCTTTACTATGATAGTAGTGCTTACTATGCCTCTTTCTACGTTCTGGACGTC	ARELYYDSSAYYASFYVLDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	239	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  T  V  S  L  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_1414   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCACCGTCAGTCTTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  95.2% (239/251)  IGHV4-61*01  49   .................................T.......CAG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  V  Y  F  N  G  N  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_1414   91   CTGGAGTGGATTGGGTATGTCTATTTCAATGGGAACACCAATTACAACCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCC  180
V  95.2% (239/251)  IGHV4-61*01  139  ..................A......A..G.....G......C........................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  L  Y  Y  D  S  S 
                    Query_1414   181  AAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGAGCTTTACTATGATAGTAGT  270
V  95.2% (239/251)  IGHV4-61*01  229  .....................C...............................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.2% (20/21)    IGHD3-22*01  4    --------------------------------------------------------------------------................  19

                                      DR3-IMGT------------------------>                                 
                                       A  Y  Y  A  S  F  Y  V  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1414   271  GCTTACTATGCCTCTTTCTACGTTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  336
D  95.2% (20/21)    IGHD3-22*01  20   .G...-------------------------------------------------------------  24
J  95.9% (47/49)    IGHJ6*02     14   -----------------.....G.A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_284629

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           272     2e-75
IGHD5-18*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACGA	CTCCCCCAA	GTGGATACGACTATGG	CCT	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGACTCCCCCAAGTGGATACGACTATGGCCTCTATTTTGACTCC	TTPPSGYDYGLYFDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	210	36	0	85.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  P  S  G  F  T  F  S  G  H  A  M  T  W  V  R  R  A  P  G  R  G  L  
                    Query_1415   1    GGTCCCTGAGACTCTCCTGTGCACCCTCTGGCTTCACTTTTAGTGGCCATGCCATGACCTGGGTCCGCCGAGCTCCAGGGAGGGGGCTGG  90
V  85.4% (210/246)  IGHV3-23*01  47   .......................G.......A.....C.....CA..T.........G...........AG..........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  G  T  G  T  R  T  F  Y  A  D  S  V  K  S  R  F  T  I  S  R  D  N  R  
                    Query_1415   91   AGTGGGTCTCTTCCATCACTGGGACTGGAACTAGAACGTTCTACGCAGACTCCGTGAAGAGCCGGTTCACCATCTCCAGAGACAATCGCA  180
V  85.4% (210/246)  IGHV3-23*01  137  ..........AG.T..T.G...T.G...TGG...C..A.A...................G..........................TC..  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  R  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  T  T  P  P  S  G  Y  D  Y  
                    Query_1415   181  AGAACAGGCTCTATCTGCAAATGAACTCATTGAGAGCCGAAGACACGGCCATATATTATTGTACGACTCCCCCAAGTGGATACGACTATG  270
V  85.4% (210/246)  IGHV3-23*01  227  ......C...G...............AGCC..........G.........G.......C...G...------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  87.5% (14/16)    IGHD5-18*01  1    ---------------------------------------------------------------------------........AG.....  15

                                      ---------------->                                  
                                      G  L  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1415   271  GCCTCTATTTTGACTCCTGGGGCCAGGGAACCCTCGTCACCGTCTCCTCAG  321
D  87.5% (14/16)    IGHD5-18*01  16   .--------------------------------------------------  16
J  93.6% (44/47)    IGHJ4*02     2    ----...C.......A..................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_284628

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           367     6e-104
IGHD3-9*01                                                                                            14.1    8.4   
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-9*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCTACG	TTTTGGCTGG	GAGAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTACGTTTTGGCTGGGAGAATGATGCACTTGATATC	ARHLRFGWENDALDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	27	25	25	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <-------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT------
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L
                    Query_1416   3    CCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGCT  92
V  97.2% (242/249)  IGHV4-39*01  51   .......................................C..................................................  140
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L

                                      ---------------><-----CDR2-IMGT-----><----------------------------------------------------
                                        E  W  I  G  S  I  Y  Y  S  G  S  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K
                    Query_1416   93   GGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACGACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCCGTTGACACGTCCAA  182
V  97.2% (242/249)  IGHV4-39*01  141  ........................................T...............................A.....A...........  230
                                        E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K

                                      FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT--
                                        N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  R  F  G  W  E  N
                    Query_1416   183  GAATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGACATCTACGTTTTGGCTGGGAGAA  272
V  97.2% (242/249)  IGHV4-39*01  231  ...C.............A.......................................C...........---------------------  299
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                        
D  90.0% (9/10)     IGHD3-9*01   12   ---------------------------------------------------------------------------.....A....-----  21

                                      --------------->                                  
                                        D  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1416   273  TGATGCACTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  96.0% (48/50)    IGHJ3*02     1    ......TT..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_284625

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            406     1e-115
IGHD6-19*01                                                                                           21.8    0.046 
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACC	GGGTGTAGCAATGGCTG	ATTTATC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAACCGGGTGTAGCAATGGCTGATTTATCCTATTACTACGGTCTGGACGTC	AREPGVAMADLSYYYGLDV	273	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	25	2	0	92.6
FR3-IMGT	159	272	114	110	4	0	96.5
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	280	270	10	0	96.4


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  I  S  R  N  T  D  A  W  N  W  
                    Query_1417   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTATCTCTCGCAACACTGATGCTTGGAACTGGA  90
V  96.4% (270/280)  IGHV6-1*01   26   ...........................................................G.....A......G..C..............  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  K  S  K  W  Y  Y  D  Y  A  V  S  V  K  
                    Query_1417   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAAGTCCAAGTGGTATTATGATTATGCAGTATCTGTGAAAA  180
V  96.4% (270/280)  IGHV6-1*01   116  ...................................................G.............A........................  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  H  L  S  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_1417   181  GTCGAATTACCATCAACCCCGACACATCCAAGAACCAGTTCTCCCTGCATCTGAGCTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  96.4% (270/280)  IGHV6-1*01   206  .......A...........A.............................G....A...................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-----------------------CDR3-IMGT----------------------->                               
                                      C  A  R  E  P  G  V  A  M  A  D  L  S  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  
                    Query_1417   271  GTGCAAGAGAACCGGGTGTAGCAATGGCTGATTTATCCTATTACTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCT  360
V  96.4% (270/280)  IGHV6-1*01   296  ..........--------------------------------------------------------------------------------  305
                                      C  A  R                                                                                   
D  88.2% (15/17)    IGHD6-19*01  1    -------------....A.....G......------------------------------------------------------------  17
J  96.4% (53/55)    IGHJ6*02     8    -------------------------------------...C.........A.......................................  60

                                        
                                      S 
                    Query_1417   361  CA  362
J  96.4% (53/55)    IGHJ6*02     61   ..  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_284627

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           327     9e-92
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCATAGTATTCTGG	GGTTCGGGGAGTTATT	CGGAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATAGTATTCTGGGGTTCGGGGAGTTATTCGGAATTGACCAC	AKDHSILGFGELFGIDH	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	19	5	0	79.2
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	22	2	0	91.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	233	221	12	0	94.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  N  F  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  R 
                    Query_1418   13   TGTGCAGCCTCTGGATTCACCTTCAGCAATTTTGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTAGA  102
V  94.8% (221/233)  IGHV3-30*18  64   ..........................T.GC.A..G.....................................................T.  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  Y  D  G  S  N  E  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_1418   103  TCATATGATGGAAGTAATGAATACTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTG  192
V  94.8% (221/233)  IGHV3-30*18  154  ..................A.........C.............................................................  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------------CDR3-IMGT---------------
                                       Q  M  N  S  L  R  P  D  D  T  A  M  Y  Y  C  A  K  D  H  S  I  L  G  F  G  E  L  F  G  I 
                    Query_1418   193  CAAATGAACAGCCTGAGACCTGACGACACGGCTATGTACTACTGTGCGAAAGATCATAGTATTCTGGGGTTCGGGGAGTTATTCGGAATT  282
V  94.8% (221/233)  IGHV3-30*18  244  ..................G....G.........G....T..............-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (16/16)   IGHD3-10*01  11   -------------------------------------------------------------------................-------  26
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1418   283  GACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  97.6% (41/42)    IGHJ4*02     9    ...T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_284626

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           339     1e-95
IGHD1-1*01                                                                                            18.0    0.56 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GTC	TACAACTGG	CGGGAGGGGGCGTTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTCTACAACTGGCGGGAGGGGGCGTTCACTAC	GLQLAGGGVHY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1419   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGCAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.7% (230/243)  IGHV3-33*01  47   ...........................................T.GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  S  N  K  H  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_1419   91   AGTGGGTGGCAATTATATGGTATGATGGAAGTAACAAACACTATGCAGACTCCGTCCAGGGCCGATTCACCATATCCAGAGACAATTCCA  180
V  94.7% (230/243)  IGHV3-33*01  137  ...........G......................T...T................GA................C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  G  L  Q  L  A  G  G  G  V  
                    Query_1419   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCTGTATATTACTGTGGTCTACAACTGGCGGGAGGGGGCGTTC  270
V  94.7% (230/243)  IGHV3-33*01  227  ........C...........................C...G...........G..........---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (9/9)     IGHD1-1*01   3    ------------------------------------------------------------------.........---------------  11

                                      ---->                                  
                                      H  Y  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_1419   271  ACTACAGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.4% (38/39)    IGHJ4*02     10   .....T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_284621

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCCCCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCCCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGPRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_1420   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_1420   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  V  S  N  G 
                    Query_1420   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCCCCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_1420   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_167684

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            310     1e-86
IGHD3-10*01                                                                                           12.2    32   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GGGGAG	GGGGAATG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGAGGGGGAATGTACTACTACCACGGTTTGGACGTG	ARGGGGMYYYHGLDV	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	24	3	3	80
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	226	21	3	90.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  V  I  S  G  D  S  V  S  S  T  T  N  W  W  T  W  V  R  Q  P  P  G  K  G 
                    Query_1421   1    ACCCTGTCCCTCACCTGCGTTATCTCTGGTGACTCCGTCAGCAGTACGACTAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGG  90
V  90.4% (226/250)  IGHV4-4*02   49   ...................C.G.........G....A.........G---...........G............................  135
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S     N  W  W  S  W  V  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       P  Q  W  I  G  E  I  L  H  T  G  S  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  I  H  K  S 
                    Query_1421   91   CCGCAATGGATTGGGGAAATCCTTCATACTGGGAGTACCAACTACGACCCGTCCCTCAAGAGTCGAGTCACCATATCAATACACAAGTCC  180
V  90.4% (226/250)  IGHV4-4*02   136  .T.G.G...............TA.....G......C.........A................................G..G........  225
                                       L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       E  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  G  M  Y  Y 
                    Query_1421   181  GAGAATCAGTTTTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGCGAGGGGGAGGGGGAATGTACTAC  270
V  90.4% (226/250)  IGHV4-4*02   226  A....C.....C.............G........................................A...--------------------  295
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01  16   ----------------------------------------------------------------------......--------------  21
J  93.0% (53/57)    IGHJ6*02     6    ------------------------------------------------------------------------------------......  11

                                      ----------------->                                 
                                       Y  H  G  L  D  V  *  G  Q  G  T  T  V  T  V  S  S 
                    Query_1421   271  TACCACGGTTTGGACGTGTAGGGCCAAGGGACCACGGTCACCGTCTCCTCA  321
J  93.0% (53/57)    IGHJ6*02     12   ...T.....A.......C.G...............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_167686

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHD3-16*02                                                                                           43.0    2e-08
IGHJ3*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	TGCTGGGCTCCACCC	TTATGATTCCATTTCGGGGAGTTATCGTTAT	TCGCCGTGGC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATGCTGGGCTCCACCCTTATGATTCCATTTCGGGGAGTTATCGTTATTCGCCGTGGCCTTTTGATATC	ANAGLHPYDSISGSYRYSPWPFDI	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  R  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1422   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCTCCTTTAGGAGTTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (230/247)  IGHV3-23*01  47   ...............................A...A.......C..C...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  N  G  G  S  T  Y  Y  G  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_1422   91   AGTGGGTCTCAGGTATCAGTGGTAATGGTGGTAGCACCTACTACGGAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCGA  180
V  93.1% (230/247)  IGHV3-23*01  137  ............C...T.......G............A.......C...........A......G.......................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  A  N  A  G  L  H  P  Y  D  
                    Query_1422   181  AGAACACACTCTATCTGCAAATGAACAGCCTGAGAGTCGATGACACGGCCGTATATTACTGTGCGAATGCTGGGCTCCACCCTTATGATT  270
V  93.1% (230/247)  IGHV3-23*01  227  .......G..G.........................C...G..........................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.3% (28/31)    IGHD3-16*02  4    ----------------------------------------------------------------------------------........  11

                                      ----CDR3-IMGT------------------------------>                                 
                                      S  I  S  G  S  Y  R  Y  S  P  W  P  F  D  I  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_1422   271  CCATTTCGGGGAGTTATCGTTATTCGCCGTGGCCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCA  347
D  90.3% (28/31)    IGHD3-16*02  12   A.G...G................------------------------------------------------------  34
J  100.0% (44/44)   IGHJ3*02     6    ---------------------------------............................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_167681

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           347     8e-98
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGTGTACGGAAATCAG	TATGATGGTAGTGGTTA	CCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTGTACGGAAATCAGTATGATGGTAGTGGTTACCCTGACTCC	ARGVYGNQYDGSGYPDS	261	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	47	4	0	92.2
CDR2-IMGT	126	146	21	16	5	0	76.2
FR3-IMGT	147	260	114	105	9	0	92.1
CDR3-IMGT (germline)	261	266	6	6	0	0	100
Total	N/A	N/A	266	244	22	0	91.7


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  S  G  S  I  S  A  Y  Y  W  S  W  V  R  
                    Query_1423   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAGTGCTTACTACTGGAGTTGGGTCCGGC  90
V  91.7% (244/266)  IGHV4-59*08  26   ................T.................................G..............AG............C...A......  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  N  L  Y  Y  R  G  S  T  R  Y  N  P  S  L  K  S  R  V  T  
                    Query_1423   91   AGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAATCTGTATTACAGAGGTAGTACCAGATACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  91.7% (244/266)  IGHV4-59*08  116  ................A...............T..A.C........T..G..C....AC...............................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  L  D  T  S  K  K  Q  F  S  L  E  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_1423   181  TATCACTAGACACGTCCAAGAAGCAATTCTCCCTGGAGGTGCGCTCTGTCACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGGGG  270
V  91.7% (244/266)  IGHV4-59*08  206  .....G................C..G.........A..C..A.......G....................................----  291
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -----------CDR3-IMGT-------------------->                                  
                                      V  Y  G  N  Q  Y  D  G  S  G  Y  P  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1423   271  TGTACGGAAATCAGTATGATGGTAGTGGTTACCCTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  345
D  94.1% (16/17)    IGHD3-22*01  8    --------------......A..........--------------------------------------------  24
J  97.6% (40/41)    IGHJ4*02     8    ----------------------------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_167680

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ3*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*01	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGCGAGGGCCTAGG	ACTTTGATACTGCTGGTTATTCCTA	GTCTCGGGTTTTTGTAAATC	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGAGGGCCTAGGACTTTGATACTGCTGGTTATTCCTAGTCTCGGGTTTTTGTAAATCC	ARRGPRTLILLVIPSLGFL*I	243	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  A  V  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1424   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTTTGCCGTGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.7% (233/246)  IGHV3-23*01  47   ................................................A....A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  C  H  N  P  Y  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1424   91   AGTGGGTCTCAAGTATTAGTAGTAGTTGTCATAACCCATACTACGCAGCCTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.7% (233/246)  IGHV3-23*01  137  ...........GC.......G.....G..GG..G.A............A.........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  R  G  P  R  T  L  I  
                    Query_1424   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGCGAGCCGAGGACACGGCCGTATATTACTGTGCGAGGCGAGGGCCTAGGACTTTGATAC  270
V  94.7% (233/246)  IGHV3-23*01  227  ................................A.................................------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  80.0% (20/25)    IGHD3-22*01  6    --------------------------------------------------------------------------------...A.....G  15

                                      CDR3-IMGT-------------------------->                                  
                                      L  L  V  I  P  S  L  G  F  L  *  I  L  G  P  R  D  S  G  H  R  L  F   
                    Query_1424   271  TGCTGGTTATTCCTAGTCTCGGGTTTTTGTAAATCCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  340
D  80.0% (20/25)    IGHD3-22*01  16   .AG........A...-------------------------------------------------------  30
J  97.1% (34/35)    IGHJ3*01     16   -----------------------------------................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_167682

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD3-16*01                                                                                           14.1    8.8  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GCCGCGAAAATCGGTCTTTGGACTACTTATCCCTG	GGGGGAG	CG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCCGCGAAAATCGGTCTTTGGACTACTTATCCCTGGGGGGAGCGACTGGTTCGACCCC	ARGPRKSVFGLLIPGGSDWFDP	236	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	25	25	25	0	0	100
CDR1-IMGT	26	49	24	18	6	0	75
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	121	21	17	4	0	81
FR3-IMGT	122	235	114	112	2	0	98.2
CDR3-IMGT (germline)	236	243	8	8	0	0	100
Total	N/A	N/A	243	231	12	0	95.1


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        L  S  L  T  C  A  V  Y  G  G  S  F  D  Y  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W
                    Query_1425   1    CCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCGATTACTATTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTG  90
V  95.1% (231/243)  IGHV4-34*01  51   .....................................AG.GGT..C............................................  140
                                        L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W

                                      ---------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IM
                                        I  G  E  I  N  H  G  A  T  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q
                    Query_1425   91   GATTGGGGAAATCAATCATGGTGCAACGACCAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCA  180
V  95.1% (231/243)  IGHV4-34*01  141  ...................A...G..GC............C.................................................  230
                                        I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q

                                      GT----------------------------------------------------><----------------------------CDR3-I
                                        F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  K  S  V  F  G  L  L
                    Query_1425   181  GTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGCCGCGAAAATCGGTCTTTGGACTACT  270
V  95.1% (231/243)  IGHV4-34*01  231  ..................C............................................---------------------------  293
                                        F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                           

                                      MGT--------------------------->                                  
                                        I  P  G  G  S  D  W  F  D  P  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_1425   271  TATCCCTGGGGGGAGCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  335
D  100.0% (7/7)     IGHD3-16*01  18   --------.......--------------------------------------------------  24
J  97.9% (47/48)    IGHJ5*02     4    -----------------................................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_128063

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           388     5e-110
IGHD4-4*01                                                                                            14.1    9.4   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACGC	TGACGACAGT	GTTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACGCTGACGACAGTGTTAACTTTGATTAC	ARYADDSVNFDY	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	72	3	0	96
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	46	5	0	90.2
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	104	10	0	91.2
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	294	271	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  N  F  M 
                    Query_1426   2    CAGGTGCAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACTTCTGGTTACAACTTTATG  91
V  92.2% (271/294)  IGHV1-18*01  1    .....T...................C...........................................G............C.....CC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  G  G  L  E  W  M  G  W  S  S  A  Y  N  G  N  T  N  Y 
                    Query_1426   92   AGCTATGGCATCAGTTGGGTGCGACAGGCCCCTGGAGGAGGACTTGAGTGGATGGGCTGGAGCAGCGCTTACAATGGTAACACAAACTAT  181
V  92.2% (271/294)  IGHV1-18*01  91   ........T.....C.....................CA...G..............A....T............................  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  D  F  Q  G  R  V  T  M  T  T  D  R  S  T  S  T  A  Y  L  V  L  R  S  L  S  S  D  D 
                    Query_1426   182  GCGCAGGACTTCCAGGGCAGAGTCACCATGACCACAGACAGATCCACGAGCACAGCCTACTTGGTGTTGAGGAGCCTGAGCTCTGACGAC  271
V  92.2% (271/294)  IGHV1-18*01  181  ..A...A.GC..............................C...................A...A.C.............A.........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  V  Y  Y  C  A  R  Y  A  D  D  S  V  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1426   272  ACGGCCGTGTATTATTGTGCGAGATACGCTGACGACAGTGTTAACTTTGATTACTGGGGACAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  92.2% (271/294)  IGHV1-18*01  271  ..............C.........----------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                 
D  90.0% (9/10)     IGHD4-4*01   1    -----------------------------....T.....-------------------------------------------------  10
J  95.6% (43/45)    IGHJ4*02     4    -------------------------------------------.......C........C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_167688

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD4-4*01                                                                                            14.1    8.9  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-4*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCGGGCAAA	TGACTCCCGTAAC	CACGAGGGCACAATGGAACAAGTC	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCGGGCAAATGACTCCCGTAACCACGAGGGCACAATGGAACAAGTCCGGTATGGACGTC	AKVGQMTPVTTRAQWNKSGMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1427   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-23*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  T  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1427   91   AGTGGGTCTCAGGTATTAGCACCAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  94.4% (235/249)  IGHV3-23*01  137  ............C......TGGT...............................................................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  N  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  V  G  Q  M  T  P  V  
                    Query_1427   181  AGAACACATTGAATCTCCAAATGAGCAGCCTGAGAGCCGAGGACACGGCCGTCTATTTCTGTGCGAAAGTCGGGCAAATGACTCCCGTAA  270
V  94.4% (235/249)  IGHV3-23*01  227  .......GC..T....G.......A...........................A....A...........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  84.6% (11/13)    IGHD4-4*01   1    ------------------------------------------------------------------------------.....A.A....  12

                                      -CDR3-IMGT--------------------------->                                 
                                      T  T  R  A  Q  W  N  K  S  G  M  D  V  W  G  Q  G  I  T  V  T  V  S  S 
                    Query_1427   271  CCACGAGGGCACAATGGAACAAGTCCGGTATGGACGTCTGGGGCCAAGGGATCACGGTCACCGTCTCCTCA  341
D  84.6% (11/13)    IGHD4-4*01   13   .----------------------------------------------------------------------  13
J  97.8% (45/46)    IGHJ6*02     17   -------------------------..........................C...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_43142

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1428   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1428   91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_1428   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1428   271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_43143

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           311     4e-87
IGHD6-19*01                                                                                           12.2    33   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	257	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	39	6	0	86.7
CDR1-IMGT	47	70	24	21	3	0	87.5
FR2-IMGT	71	121	51	47	4	0	92.2
CDR2-IMGT	122	142	21	17	4	0	81
FR3-IMGT	143	256	114	100	14	0	87.7
CDR3-IMGT (germline)	257	264	8	7	1	0	87.5
Total	N/A	N/A	263	231	32	0	87.8


Alignments

                                      <-----------------FR1-IMGT------------------><-------CDR1-IMGT------><--------------------
                                       L  V  K  P  S  E  T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P 
                    Query_1429   2    CTGGTGAAGCCCTCGGAGACCCTGTCCCTCACTTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCC  91
V  87.8% (231/263)  IGHV4-34*01  31   ...T.......T....................C........CTA..G..G......C.................C...A.C.........  120
                                       L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P 

                                      FR2-IMGT---------------------><-----CDR2-IMGT-----><--------------------------------------
                                       P  G  K  G  L  E  W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  M  S 
                    Query_1429   92   CCAGGGAAGGGACTGGAGTGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCATGTCA  181
V  87.8% (231/263)  IGHV4-34*01  121  ...........G......................A............CA.C.AC......C..T......A...............A...  210
                                       P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S 

                                      --------------FR3-IMGT----------------------------------------------------><--------------
                                       V  D  T  S  K  K  Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W 
                    Query_1429   182  GTAGACACGTCCAAGAAACAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCTGG  271
V  87.8% (231/263)  IGHV4-34*01  211  .................C..GT...........C..A......T.....................G.....C......A....-------  293
                                       V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G       
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------------------------......  18

                                      --CDR3-IMGT--------------->                                  
                                       R  R  Q  R  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1429   272  CGAAGACAGCGCAACTGGTTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  332
J  98.0% (49/50)    IGHJ5*02     2    -----------..............................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_92802

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           366     2e-103
IGHD3-10*02                                                                                           10.3    144   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGGCCCTCAGCGACGGCCACAATT	TGTTC	AAA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATGGGGCCCTCAGCGACGGCCACAATTTGTTCAAATACTACGGTATGGACGTC	VRDGALSDGHNLFKYYGMDV	292	351	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	70	5	0	93.3
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	19	5	0	79.2
FR3-IMGT	178	291	114	100	14	0	87.7
CDR3-IMGT (germline)	292	299	8	7	1	0	87.5
Total	N/A	N/A	296	265	31	0	89.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  N  F  T 
                    Query_1430   4    CAGATGCAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTCAGGCTTCTGGTTACAATTTTACC  93
V  89.5% (265/296)  IGHV1-18*01  1    ...G.T...................C.......................................CA...............CC......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  F  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  V  D  N  G  N  T  K  Y 
                    Query_1430   94   AATTTTGGTATCAGCTGGGTGCGGCAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCGGCGTTGATAATGGTAATACAAAATAT  183
V  89.5% (265/296)  IGHV1-18*01  91   .GC.A..................A.......................................A...C.T.C........C.....C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  I  L  Q  G  R  V  T  L  T  T  D  T  S  T  R  K  T  Y  M  Q  L  R  S  L  R  S  D  D 
                    Query_1430   184  GCACAGATTCTCCAGGGCAGAGTCACCTTGACCACAGACACATCTACGAGAAAAACCTATATGCAACTGAGGAGTCTGAGATCTGACGAC  273
V  89.5% (265/296)  IGHV1-18*01  181  .......AG..................A................C.....C.C.G....C...G.G........C...............  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  V  Y  Y  C  V  R  D  G  A  L  S  D  G  H  N  L  F  K  Y  Y  G  M  D  V  W  G  Q  G 
                    Query_1430   274  ACGGCCGTCTATTATTGTGTGAGAGATGGGGCCCTCAGCGACGGCCACAATTTGTTCAAATACTACGGTATGGACGTCTGGGGCCAAGGG  363
V  89.5% (265/296)  IGHV1-18*01  271  ........G.....C....C......----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD3-10*02  10   ----------------------------------------------------.....---------------------------------  14
J  98.0% (50/51)    IGHJ6*02     12   ------------------------------------------------------------..............................  41

                                                           
                                       T  T  V  T  V  S  S 
                    Query_1430   364  ACTACGGTCACCGTCTCCTCA  384
J  98.0% (50/51)    IGHJ6*02     42   ..C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_43140

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         288     5e-80
IGHD2-2*01                                                                                            19.9    0.15 
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	TGGGGCCT	TACCAGGTGCTAT	CACTT	GACAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGTGGGGCCTTACCAGGTGCTATCACTTGACACC	ATVGPYQVLSLDT	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	12	9	0	57.1
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  G  S  M  N  T  D  G  Y  S  W  G  W  I  R  Q  P  P  G  Q  G 
                    Query_1431     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAACACTGATGGATACTCTTGGGGCTGGATCCGGCAGCCGCCAGGGCAGGGC  90
V  86.8% (217/250)  IGHV4-30-2*01  49   ..................G...................C.G..G..G...T.....C...A................A......A.....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  F  G  L  D  T  A  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 
                    Query_1431     91   CTGGAGTGGATTGGCTTCGGCTTAGACACTGCGAACACCTACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCGGTGGACAGGTCC  180
V  86.8% (217/250)  IGHV4-30-2*01  139  ..............G.A.AT..ATC.T.G..G..G...............G.......................A..A..A.........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         K  K  D  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  V  G  P  Y  Q  V  L 
                    Query_1431     181  AAGAAGGACTTCTCCCTGAAGCTAGCCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCCACAGTGGGGCCTTACCAGGTGCTA  270
V  86.8% (217/250)  IGHV4-30-2*01  229  .....CC.G..............GAG...........................G.............G..--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD2-2*01     16   ------------------------------------------------------------------------------......C.....  27

                                        ----------->                                  
                                         S  L  D  T  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_1431     271  TCACTTGACACCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  316
D  92.3% (12/13)    IGHD2-2*01     28   .---------------------------------------------  28
J  95.0% (38/40)    IGHJ5*02       12   ------...C...............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_145031

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           338     5e-95
IGHD3-16*01                                                                                           12.2    33   
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GCCGCGAAAATCGGTCTTTGGACTACTTATCCC	TGGGGG	GGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCCGCGAAAATCGGTCTTTGGACTACTTATCCCTGGGGGGGGCGACTGGTTCGACCCC	ERAAKIGLWTTYPWGGRLVRP	239	304	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	28	27	0	1	96.4
CDR1-IMGT	29	52	24	18	6	0	75
FR2-IMGT	53	103	51	51	0	0	100
CDR2-IMGT	104	124	21	17	4	0	81
FR3-IMGT	125	238	114	112	2	0	98.2
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	246	233	12	1	94.7


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                       T  L  S  P  H  L  R  C  L  W  W  V  L  R  L  L  L  L  E  L  D  P  P  A  P  R  E  G  A  G 
                    Query_1432   1    ACCCTGTCCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCGATTACTATTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGA  90
V  94.7% (233/246)  IGHV4-34*01  49   ..........-.............................AG.GGT..C.........................................  137
                                       T  L  S   L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E

                                      ------------><-----CDR2-IMGT-----><----------------------------------------------------FR3
                                       V  D  W  G  N  Q  S  W  C  N  D  Q  L  Q  H  V  P  Q  E  S  S  H  H  I  S  R  H  V  Q  E 
                    Query_1432   91   GTGGATTGGGGAAATCAATCATGGTGCAACGACCAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAA  180
V  94.7% (233/246)  IGHV4-34*01  138  ......................A...G..GC............C..............................................  227
                                        W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N

                                      -IMGT----------------------------------------------------><----------------------------CDR
                                       P  V  L  P  E  A  E  V  C  D  R  R  G  H  G  C  V  L  L  C  E  R  A  A  K  I  G  L  W  T 
                    Query_1432   181  CCAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGCCGCGAAAATCGGTCTTTGGACT  270
V  94.7% (233/246)  IGHV4-34*01  228  .....................C............................................------------------------  293
                                        Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                        

                                      3-IMGT--------------------------->                                  
                                       T  Y  P  W  G  G  R  L  V  R  P  L  G  P  G  N  P  D  H  R  L  L   
                    Query_1432   271  ACTTATCCCTGGGGGGGGCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  338
D  100.0% (6/6)     IGHD3-16*01  17   ---------......-----------------------------------------------------  22
J  97.9% (47/48)    IGHJ5*02     4    --------------------................................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_245620

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            360     1e-101
IGHD3-10*01                                                                                           52.6    2e-11 
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GGGGTCCCCA	TATTACTATGGTTCGGGGAGTTATTAT	CG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGAGGGGTCCCCATATTACTATGGTTCGGGGAGTTATTATCGCTGGTTCGACCCC	AKEGSPYYYGSGSYYRWFDP	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  D  S  Y  A  I  H  W  V  R  Q  T  P  G  K  G  L  
                    Query_1433   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTGATAGTTATGCCATACACTGGGTCCGGCAAACTCCAGGGAAGGGCCTGG  90
V  96.0% (240/250)  IGHV3-9*01   47   ....................................C.......GA.........G...............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  D  W  N  S  G  S  I  G  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_1433   91   AGTGGGTCTCAGGTATTGATTGGAATAGTGGGAGCATAGGCTATGCGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-9*01   137  .................AG............T.........................A................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  K  E  G  S  P  Y  Y  Y  
                    Query_1433   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGACCTGAGGACACGGCCTTGTATTACTGTGCAAAAGAGGGGTCCCCATATTACTATG  270
V  96.0% (240/250)  IGHV3-9*01   227  ...................................G..................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (27/27)   IGHD3-10*01  2    --------------------------------------------------------------------------------..........  11

                                      R3-IMGT------------------------>                                  
                                      G  S  G  S  Y  Y  R  W  F  D  P  W  G  Q  G  T  L  V  T  V  A  S  
                    Query_1433   271  GTTCGGGGAGTTATTATCGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTTACCGTCGCCTCAG  336
D  100.0% (27/27)   IGHD3-10*01  12   .................-------------------------------------------------  28
J  95.7% (45/47)    IGHJ5*02     5    -------------------.................................C......T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_12723

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           336     1e-94
IGHD2-21*01                                                                                           12.2    33   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTTCTTTGGCGATTTCGA	CTATTC	GGGCCCCCTATCCACCCCACA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTCTTTGGCGATTTCGACTATTCGGGCCCCCTATCCACCCCACAAC	ARLSLAISTIRAPYPPHN	246	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  A  S  I  S  G  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_1434   4    CCCTGAGACTCTCCTGCTCTGTTTCTGGTGCCTCCATCAGTGGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  93.2% (232/249)  IGHV4-39*01  50   .....TCC...A.....A....C.......G.........CA..............................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  T  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  
                    Query_1434   94   TGGAGTGGATAGGGACTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGGGTCGAGTCACCATATCCGTAGACACGTCCA  183
V  93.2% (232/249)  IGHV4-39*01  140  ..........T....G...........................................A..............................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  D  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  S  L  A  I  S  T  
                    Query_1434   184  AGGACCAGTTCTCCCTGAAACTGAACTCTGTGACCGCCGCAGACACGGCTCTGTATTACTGTGCGAGACTTTCTTTGGCGATTTCGACTA  273
V  93.2% (232/249)  IGHV4-39*01  230  ..A................G....G.........................G..................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*01  22   ---------------------------------------------------------------------------------------...  24

                                      IMGT--------------------->                                  
                                      I  R  A  P  Y  P  P  H  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1434   274  TTCGGGCCCCCTATCCACCCCACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (6/6)     IGHD2-21*01  25   ...---------------------------------------------------------  27
J  100.0% (36/36)   IGHJ4*02     13   ------------------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_25388

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           343     2e-96
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGTCGTCGAGGGCACACGACATT	TATAGCAGTGGCTGG	GGGAGGCCGGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGTCGTCGAGGGCACACGACATTTATAGCAGTGGCTGGGGGAGGCCGGCTGACTAC	ARASSRAHDIYSSGWGRPADY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  D  S  G  F  T  F  S  S  H  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1435   1    GGTCCCTGAGACTCTCCTGTGCAGACTCTGGATTCACCTTCAGTAGCCACGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-30*03  47   ........................C......................T.T........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  S  Y  E  G  S  T  K  Y  Y  V  D  S  V  K  G  R  F  T  A  S  R  D  N  S  
                    Query_1435   91   AGTGGGTGGCTTTTATATCATATGAAGGAAGTACTAAATACTATGTAGACTCCGTGAAGGGCCGGTTCACCGCCTCCAGAGACAATTCCA  180
V  94.0% (234/249)  IGHV3-30*03  137  ..........AG.............T.......A...........C..................A......AT.................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  A  S  S  R  A  H  D  
                    Query_1435   181  AGAACACACTGTATCTGCAAATGGACAGCCTGAGAGCTGATGACACGGCTGTCTATTACTGTGCGAGAGCGTCGTCGAGGGCACACGACA  270
V  94.0% (234/249)  IGHV3-30*03  227  .......G...............A................G...........G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      DR3-IMGT-------------------------->                                  
                                      I  Y  S  S  G  W  G  R  P  A  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_1435   271  TTTATAGCAGTGGCTGGGGGAGGCCGGCTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  339
D  100.0% (15/15)   IGHD6-19*01  4    --...............----------------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    ----------------------------..............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_20616

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           349     2e-98
IGHD3-16*02                                                                                           33.4    1e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCAGGCCGG	TTACGTTTGGGGGAGGTTTCGTT	TTTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCAGGCCGGTTACGTTTGGGGGAGGTTTCGTTTTTCCTACGTTGACCAC	ARGQAGYVWGRFRFSYVDH	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  E  S  F  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1436   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGAGTCCTTCAGTGGTTACTACTGGAACTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.5% (234/245)  IGHV4-34*01  49   ...............................G.......................G..................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  R  H  S  G  S  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1436   91   TGGATTGGGGAAATCAGGCATAGTGGAAGCACCTACTACAACGCGTCCCTCAAGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-34*01  139  ................AT...............A........C...............................A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  R  L  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  Q  A  G  Y  V  W  G  R 
                    Query_1436   181  CAGTTCTCCCTGAGGTTGACCTCTGTGAGCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCCAGGCCGGTTACGTTTGGGGGAGG  270
V  95.5% (234/245)  IGHV4-34*01  229  .............A.C...G........C....................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  91.3% (21/23)    IGHD3-16*02  10   --------------------------------------------------------------------------...............T  25

                                      ----------------------->                                  
                                       F  R  F  S  Y  V  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1436   271  TTTCGTTTTTCCTACGTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  91.3% (21/23)    IGHD3-16*02  26   .A.....---------------------------------------------------  32
J  95.7% (45/47)    IGHJ4*02     2    -----------....T.....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_25384

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            399     2e-113
IGHD1-20*01                                                                                           18.0    0.62  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TTG	ATAACTGGA	GA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTGATAACTGGAGA	VDNWR	292	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	70	1	0	98.6
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	292	1	1	0	0	100
Total	N/A	N/A	285	270	15	0	94.7


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  R  
                    Query_1437   8    TGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATACACCTTCACCAGAT  97
V  94.7% (270/285)  IGHV1-8*01   5    ...................................................................T....................T.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      F  D  I  H  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  S  D  F  A  
                    Query_1437   98   TTGATATCCACTGGGTGCGACAGGCCACTGGACAAGGACTTGAGTGGATGGGGTGGATGAACCCTAACAGTGGTAATTCAGACTTTGCAC  187
V  94.7% (270/285)  IGHV1-8*01   95   A.......A............................G..............A.......................CA...G..A.....  184
                                      Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  R  V  T  L  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  D  G  T  
                    Query_1437   188  AGAAGTTCCAGGGCAGAGTCACCTTGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGACGGCACGG  277
V  94.7% (270/285)  IGHV1-8*01   185  .......................A..........................................................G.A.....  274
                                      Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><--CDR3-IMGT-->                                  
                                      A  L  Y  Y  C  V  D  N  W  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1437   278  CCCTATATTACTGTGTTGATAACTGGAGATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
V  94.7% (270/285)  IGHV1-8*01   275  ..G.G..........------------------------------------------------  289
                                      A  V  Y  Y  C                                                  
D  100.0% (9/9)     IGHD1-20*01  4    ------------------.........------------------------------------  12
J  100.0% (34/34)   IGHJ4*02     15   -----------------------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_12724

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*04                                                                                           297     7e-83
IGHD3-10*01                                                                                           14.1    8.0  
IGHJ5*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*04	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	N/A	TTATAAC	AACAACCTAAACGGCGGCT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTTATAACAACAACCTAAACGGCGGCTCC	AYNNNLNGGS	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	24	18	3	3	75
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	241	2	2	0	0	100
Total	N/A	N/A	244	219	22	3	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  S  F  S  N  F  A  V  Y  W  A  R  Q  A  P  G  K  G  L  
                    Query_1438   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCTCCTTCAGTAATTTTGCTGTATACTGGGCCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  89.8% (219/244)  IGHV3-64*04  47   ...................................A.........GC.A....A.GC......T..........................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  S  I  T  S     G  G  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1438   91   AATATGTTTCATCTATTACTAGT---GGGGGTAACACGTACTACGCAGACTCAGTGAAGGGCAGATTCACCATCTCCCGAGACAATTCCA  177
V  89.8% (219/244)  IGHV3-64*04  137  ...........G......G....AAT.......G...A.......................................A............  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  D  T  L  Y  L  L  L  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  Y  N  N  N  L  N  G  G  
                    Query_1438   178  AGGACACACTGTATCTTCTATTGAACAGTCTGAGACCTGAGGACACTGCTGTCTATTACTGTGCTTATAACAACAACCTAAACGGCGGCT  267
V  89.8% (219/244)  IGHV3-64*04  227  ..A....G........G.A.A.......C......G..........G.....G...........--------------------------  290
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-10*01  25   ----------------------------------------------------------------.......-------------------  31

                                      ->                                  
                                      S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_1438   268  CCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  303
J  97.2% (35/36)    IGHJ5*02     16   ..............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_25386

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           338     5e-95
IGHD3-22*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GTGTCGCCTCC	TATTATTATGACAGT	GATGGCTATGGTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGTCGCCTCCTATTATTATGACAGTGATGGCTATGGTCCCTACTACTCCAGTATGGACGTC	ASVASYYYDSDGYGPYYSSMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1439   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTTACCTTCAATACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  93.9% (231/246)  IGHV3-33*03  47   ..................................C.......G..G.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  E  N  S  
                    Query_1439   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTACTACTTACTATGCAGATTCTGTGAAGGGCCGATTCACCATCTCCAGAGAGAACTCCA  180
V  93.9% (231/246)  IGHV3-33*03  137  .................................A..AA...........C..C.............................C.......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  G  V  Y  F  C  A  S  V  A  S  Y  Y  Y  D  
                    Query_1439   181  AGAACACCCTGTACCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGGTGTATATTTCTGTGCGAGTGTCGCCTCCTATTATTATGACA  270
V  93.9% (231/246)  IGHV3-33*03  227  .......G.....T..................................C...G....A........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  86.7% (13/15)    IGHD3-22*01  2    -----------------------------------------------------------------------------.....C.....T.  14

                                      -CDR3-IMGT--------------------------->                                 
                                      S  D  G  Y  G  P  Y  Y  S  S  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1439   271  GTGATGGCTATGGTCCCTACTACTCCAGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  86.7% (13/15)    IGHD3-22*01  15   ..---------------------------------------------------------------------  16
J  96.4% (53/55)    IGHJ6*02     8    ----------------........A.G............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_25380

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            367     5e-104
IGHD3-22*01                                                                                           18.0    0.57  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGGAGGG	GGTTATCACTAC	GTCC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGGAGGGGGTTATCACTACGTCCTTGATTAC	ARVGGGYHYVLDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1440   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-7*01   47   ..............................................C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  K  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1440   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAAAAGTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (242/249)  IGHV3-7*01   137  ......................................T.C.................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  G  G  G  Y  H  Y  
                    Query_1440   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGCGAGAGTCGGAGGGGGTTATCACTACG  270
V  97.2% (242/249)  IGHV3-7*01   227  ............A.....................................G.G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD3-22*01  20   -----------------------------------------------------------------------------......T.....-  31

                                      ---------->                                  
                                      V  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1440   271  TCCTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ4*02     7    ---....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_25381

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           290     2e-80
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	TCTACAGTGCGGGGCGC	TGGCTGGT	GGCCGGTTGGGTACAT	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	48	3	0	94.1
CDR2-IMGT	92	115	24	19	5	0	79.2
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	235	6	5	1	0	83.3
Total	N/A	N/A	223	204	19	0	91.5


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  T  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  H  I  Y  Y  D
                    Query_1441   13   GTCTGGATTCACCTTCAGTACCTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGGAGTGGGTGGCACATATTTACTATGA  102
V  91.5% (204/223)  IGHV3-33*01  72   ....................G..A....................................G...............GT...A.GG.....  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  T  N  K  Y  Y  A  D  S  M  K  G  R  F  T  I  S  R  D  N  S  R  D  T  L  Y  L  Q  M  N
                    Query_1441   103  TGGAACTAATAAGTATTATGCAGACTCCATGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGGATACCCTGTATCTGCAAATGAA  192
V  91.5% (204/223)  IGHV3-33*01  162  .....G......A..C............G....................................A.A.C..G.................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------>                                                     
                                        S  L  R  V  E  D  T  A  M  Y  Y  C  V  R  S  T  V  R  G  A  G  W  W  P  V  G  Y  M  G  Q
                    Query_1441   193  CAGCCTGAGAGTCGAGGACACGGCTATGTATTACTGTGTGAGATCTACAGTGCGGGGCGCTGGCTGGTGGCCGGTTGGGTACATGGGCCA  282
V  91.5% (204/223)  IGHV3-33*01  252  ...........C.............G............C....-----------------------------------------------  294
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (8/8)     IGHD6-19*01  12   ------------------------------------------------------------........----------------------  19
J  100.0% (27/27)   IGHJ4*02     17   ------------------------------------------------------------------------------------......  22

                                                           
                                        G  T  L  V  T  V  S
                    Query_1441   283  GGGAACCCTGGTCACCGTCTC  303
J  100.0% (27/27)   IGHJ4*02     23   .....................  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_25382

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_1442   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_1442   91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y 
                    Query_1442   181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTAC  270
V  91.4% (223/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD2-2*01   8    ---------------------------------------------------------------------........T........----  24
J  88.5% (46/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_1442   271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  318
J  88.5% (46/52)    IGHJ6*02     15   ...GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_25383

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1443   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_1443   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_1443   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  93.1% (54/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_1443   271  GTCTGGGGCCAAGGGACCACGGTTATCGTCTCCTCA  306
J  93.1% (54/58)    IGHJ6*02     27   .......................C.C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_294237

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           10.3    117  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAGGTTTCGATA	GGGGG	G	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAGGTTTCGATAGGGGGGGGTTCGACCCC	ARDRGFDRGGFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1444   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A......A..............................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  Y  Y  S  G  S  I  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  M  P  K  N 
                    Query_1444   91   TGGATTGCGTATATCTATTACAGTGGGAGCATCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACATGCCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  .......G.......................C...C.....................................T.....C.T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  I  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  G  F  D  R  G  G  F 
                    Query_1444   181  CAGATCTCCCTGAAGTTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATAGAGGTTTCGATAGGGGGGGGTTC  270
V  95.1% (233/245)  IGHV4-59*01  229  ...T...........C................T................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -------------------------------------------------------------------------------.....------  22
J  100.0% (45/45)   IGHJ5*02     7    -------------------------------------------------------------------------------------.....  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1444   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (45/45)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_294236

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD2-21*01                                                                                           18.0    0.60 
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CAGTTTCTGTCTTAGTTTGGACCGGGGAGT	TTGTGGTGG	N/A	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGGGGAGTTTGTGGTGGTTTTGATATG	ARGSFCLSLDRGVCGGFDM	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  N  G  G  S  L  N  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1445   1    ACCCTGTCCCTCACCTGCGCCGTCAATGGTGGGTCCCTCAATGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAG  90
V  92.2% (226/245)  IGHV4-34*01  49   ....................T...T...........T...G..G.......................................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  Q  S  G  T  T  N  Y  K  P  S  L  K  S  R  V  I  T  S  V  D  T  S  K  N 
                    Query_1445   91   TGGATTGGGGAAATCAATCAAAGTGGCACCACCAACTACAAGCCGTCCCTCAAGAGTCGAGTAATCACATCGGTGGACACGTCCAAGAAT  180
V  92.2% (226/245)  IGHV4-34*01  139  ....................T.....A.G............C....................C.C..T...A..A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  F  C  L  S  L  D  R 
                    Query_1445   181  CAGTTCTCCTTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGG  270
V  92.2% (226/245)  IGHV4-34*01  229  .........C.....C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      ----------------------->                               
                                       G  V  C  G  G  F  D  M  W  G  Q  G  T  M  V  T  V  S  
                    Query_1445   271  GGAGTTTGTGGTGGTTTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTT  325
D  100.0% (9/9)     IGHD2-21*01  7    -----.........-----------------------------------------  15
J  97.6% (40/41)    IGHJ3*02     7    --------------.........C...............................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_294235

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           400     9e-114
IGHD1-1*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAGGGGG	CAACTGG	GACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTAC	ARGGGNWDPFDY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	73	1	0	98.6
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	46	5	0	90.2
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	292	274	18	0	93.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_1446   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCG  91
V  93.8% (274/292)  IGHV5-51*01  2    .....................................................................G............C......A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      A  Y  W  I  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  V  V  Y  P  D  D  S  D  A  R  Y  
                    Query_1446   92   CCTACTGGATCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGGTCGTCTATCCTGATGACTCTGATGCCAGATACA  181
V  93.8% (274/292)  IGHV5-51*01  92   G.....................C..G.........A..........G.........A..A.........G..........A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  H  I  T  I  S  A  D  K  S  I  S  T  A  F  L  Q  W  N  S  L  K  A  S  D  
                    Query_1446   182  GCCCGTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACA  271
V  93.8% (274/292)  IGHV5-51*01  182  ...........C.......GG....................................A...........G....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  I  Y  Y  C  A  R  G  G  G  N  W  D  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1446   272  CCGCCATCTATTACTGTGCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  93.8% (274/292)  IGHV5-51*01  272  .......G..............-----------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    -------------------------------.......-------------------------------------------------  11
J  100.0% (44/44)   IGHJ4*02     5    -------------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_294234

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           357     1e-100
IGHD3-3*01                                                                                            21.8    0.041 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGCCTCGTGCCTG	GGAGTGGTTAT	GAAGCCATACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGCCTCGTGCCTGGGAGTGGTTATGAAGCCATACCTGACTAC	AKSLVPGSGYEAIPDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1447   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTTAGCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-23*01  47   ......................................T..................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  D  T  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1447   91   AATGGGTCTCAGGTATTAGTGGTAGTGGTGGTGACACATACTACGCAGACGCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (238/248)  IGHV3-23*01  137  .G..........C...................AG................T.......................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  F  C  A  K  S  L  V  P  G  S  G  
                    Query_1447   181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTATATTTCTGTGCGAAAAGCCTCGTGCCTGGGAGTGGTT  270
V  96.0% (238/248)  IGHV3-23*01  227  ...A................................C....................A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD3-3*01   15   ---------------------------------------------------------------------------------.........  23

                                      T------------------>                                
                                      Y  E  A  I  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1447   271  ATGAAGCCATACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  322
D  100.0% (11/11)   IGHD3-3*01   24   ..--------------------------------------------------  25
J  100.0% (39/39)   IGHJ4*02     8    -------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_294233

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           350     8e-99
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTACCGGC	AGTGGTTA	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTACCGGCAGTGGTTATTTGACTAC	ARHYRQWLFDY	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  R  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  R  
                    Query_1448   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGAAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGAGGC  93
V  94.8% (237/250)  IGHV4-39*01  50   .....TCC...A....C.......................C.............................................G...  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  L  Y  Y  S  G  G  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_1448   94   TGGAGTGGATTGGGAGTTTGTATTATAGTGGGGGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCA  183
V  94.8% (237/250)  IGHV4-39*01  140  .................A.C............A.........................................................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  H  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  Q  W  L  F  
                    Query_1448   184  AGAACCACTTGTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTTTATTACTGTGCGAGACATTACCGGCAGTGGTTATTTG  273
V  94.8% (237/250)  IGHV4-39*01  230  .......G..C.........................................G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-22*01  17   ------------------------------------------------------------------------------........----  24
J  100.0% (43/43)   IGHJ4*02     6    --------------------------------------------------------------------------------------....  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1448   274  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (43/43)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_294232

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           377     9e-107
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTGC	AGRIAVANTGHYFDC	274	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	60	56	55	1	0	98.2
CDR1-IMGT	61	84	24	23	1	0	95.8
FR2-IMGT	85	135	51	49	2	0	96.1
CDR2-IMGT	136	159	24	22	2	0	91.7
FR3-IMGT	160	273	114	104	10	0	91.2
CDR3-IMGT (germline)	274	279	6	5	1	0	83.3
Total	N/A	N/A	275	258	17	0	93.8


Alignments

                                      <-----------------------FR1-IMGT-----------------------><-------CDR1-IMGT------><---------
                                         G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y  W  I  V  W  
                    Query_1449   5    CTGGTGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTACTGGATCGTCTGGG  94
V  93.8% (258/275)  IGHV5-51*03  20   ....A..........................................................G....................G.....  109
                                         G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W  I  G  W  

                                      -----------FR2-IMGT---------------------><-------CDR2-IMGT------><------------------------
                                      V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P  S  F  Q  G  
                    Query_1449   95   TGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCCGTCCTTCCAAGGCC  184
V  93.8% (258/275)  IGHV5-51*03  110  ..................A...................................A....G.....A........................  199
                                      V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S  F  Q  G  

                                      ----------------------------FR3-IMGT----------------------------------------------------><
                                      Q  V  T  I  S  A  D  K  S  N  R  T  A  Y  L  Q  W  S  S  L  Q  A  G  D  A  A  V  Y  Y  C  
                    Query_1449   185  AGGTCACCATCTCAGCCGACAAGTCCAACAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGGGGACGCCGCCGTCTATTACTGTG  274
V  93.8% (258/275)  IGHV5-51*03  200  ...........................T...C...........G...............A.....TC....A.....A.G..........  289
                                      Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M  Y  Y  C  

                                      -----------------CDR3-IMGT----------------->                                  
                                      A  G  R  I  A  V  A  N  T  G  H  Y  F  D  C  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_1449   275  CGGGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTGCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  352
V  93.8% (258/275)  IGHV5-51*03  290  ..A..-------------------------------------------------------------------------  294
                                      A  R                                                                          
D  100.0% (12/12)   IGHD6-19*01  5    --------............----------------------------------------------------------  16
J  95.8% (46/48)    IGHJ4*02     1    ------------------------------............A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_294231

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCCGTTG	ATTACTATGAAAGTACTTGTTATT	CT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGTTGATTACTATGAAAGTACTTGTTATTCTTAC	ARAVDYYESTCYSY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  R  I  S  C  R  V  S  G  D  M  F  G  S  Y
                    Query_1450   1    GCAGCTGGTGCAGTCTGGAGCAGAGCTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGTTTCTGGAGACATGTTCGGCAGTTA  90
V  92.4% (267/289)  IGHV5-51*01  6    .........................G........................A...........A..G.......T...GC..TAC...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_1450   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGCAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  92.4% (267/289)  IGHV5-51*01  96   ........G.....................G...........................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  R  V  T  F  S  V  D  T  S  L  S  T  A  Y  V  Q  W  S  S  L  K  P  S  D  T  A
                    Query_1450   181  GTCATTCCAAGGCCGGGTCACCTTCTCAGTCGACACGTCCCTCAGCACCGCCTACGTGCAGTGGAGCAGCCTGAAGCCCTCGGACACCGC  270
V  92.4% (267/289)  IGHV5-51*01  186  ...C..........A.......A......C.....A....A..............C....................G.............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  A  V  D  Y  Y  E  S  T  C  Y  S  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_1450   271  CATATATTACTGTGCGAGAGCCGTTGATTACTATGAAAGTACTTGTTATTCTTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  359
V  92.4% (267/289)  IGHV5-51*01  276  ...G...............----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  87.5% (21/24)    IGHD3-22*01  3    --------------------------..........T....G.G......---------------------------------------  26
J  97.3% (36/37)    IGHJ4*02     12   ----------------------------------------------------........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_294239

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*04                                                                                           307     1e-85
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*04	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	AGACATTGGGCT	GCAGCTGG	GCCGGG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTGGGCTGCAGCTGGGCCGGGTGACTTC	ARHWAAAGPGDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	218	22	0	90.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  T  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1451   1    ACCCTGTCCCTCACCTGCACAGTCTCTGGTGGCTCCATCGGTACTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.8% (218/240)  IGHV4-59*04  49   ....................T..................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  D  Y  N  G  R  T  F  H  N  P  S  L  K  S  R  V  T  V  S  L  D  T  S  K  N 
                    Query_1451   91   TGGATTGGGAGTATCGATTACAATGGGAGAACCTTCCACAACCCGTCTCTCAAGAGTCGAGTCACCGTGTCCTTAGACACGTCCAAGAAC  180
V  90.8% (218/240)  IGHV4-59*04  139  .........TA....T....T.G......C....A.T..........C..................A....AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  K  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  H  W  A  A  A  G  P  G  D 
                    Query_1451   181  CAGTTCTCCGTGAAACTGAGTTCCGTGACCGCCGCGGACACGGCTCTGTATTACTGTGCGAGACATTGGGCTGCAGCTGGGCCGGGTGAC  270
V  90.8% (218/240)  IGHV4-59*04  229  .........C....G.....C..T...........A.........G..............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (8/8)     IGHD6-13*01  11   ------------------------------------------------------------------------........----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------------....  11

                                      -->                                  
                                       F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1451   271  TTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.6% (40/41)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_294238

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD6-13*01                                                                                           12.2    36    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	292	3	3	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_1452   3    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCA  92
V  95.9% (278/290)  IGHV5-51*01  2    ..G...................................................................T...................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_1452   93   CCTACTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  182
V  95.9% (278/290)  IGHV5-51*01  92   G.........................A.......G.............G.........................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  S  T  L  K  A  S  D  
                    Query_1452   183  GTCCGTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAGCACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACC  272
V  95.9% (278/290)  IGHV5-51*01  182  .C......................C...................A...........................G................A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      P  A  V  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1452   273  CCGCCGTGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  95.9% (278/290)  IGHV5-51*01  272  .....A..............-------------------------------------------------------------------  291
                                      T  A  M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    -------------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_159565

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           396     2e-112
IGHD3-22*01                                                                                           12.2    37    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACATTTCCTAAT	CTATGA	CAACAGAAATTACCGCCCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACATTTCCTAATCTATGACAACAGAAATTACCGCCCTCTTGACTAC	ARGHFLIYDNRNYRPLDY	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	271	18	0	93.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  R  Y 
                    Query_1453   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTAAGGCCTCTGGTTACAGCTTTTCCCGTTAT  91
V  93.8% (271/289)  IGHV1-18*01  7    ...........................................................C.....T..........C....A..A.C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  H 
                    Query_1453   92   GGTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCAGCGCTTACAATGGTAACACAAACTATGCACAT  181
V  93.8% (271/289)  IGHV1-18*01  97   ...A..............................................A......................................G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  E  D  R  V  T  M  T  T  D  T  S  T  T  T  A  Y  M  E  L  R  S  L  T  S  D  D  T  A 
                    Query_1453   182  AAATTCGAGGACAGAGTCACCATGACCACAGACACTTCCACGACCACAGCCTACATGGAACTGAGGAGCCTGACATCTGACGACACGGCC  271
V  93.8% (271/289)  IGHV1-18*01  187  ..GC..C...G........................A.......G...............G.............G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  G  H  F  L  I  Y  D  N  R  N  Y  R  P  L  D  Y  W  G  Q  G  T  L  L  T 
                    Query_1453   272  GTCTATTACTGTGCGAGAGGACATTTCCTAATCTATGACAACAGAAATTACCGCCCTCTTGACTACTGGGGCCAGGGAACCCTGCTCACC  361
V  93.8% (271/289)  IGHV1-18*01  277  ..G................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD3-22*01  7    --------------------------------......----------------------------------------------------  12
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------..........................G.....  38

                                                
                                       V  S  S  
                    Query_1453   362  GTCTCCTCAG  371
J  97.6% (41/42)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_159564

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           327     9e-92
IGHD2-2*01                                                                                            18.0    0.62 
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAAGGGGGGGGG	ATTGCAGTAGTA	AAACCTGCC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAAGGGGGGGGGATTGCAGTAGTAAAACCTGCCACTTCTCCTACGGTCTGGACGTC	TRSRGGDCSSKTCHFSYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  R  V  G  Y  Y  W  N  W  V  R  Q  H  P  G  K  G 
                    Query_1454   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATCGTGTCGGTTACTACTGGAACTGGGTCCGCCAGCACCCCGGGAAGGGC  90
V  92.0% (229/249)  IGHV4-31*01  49   ........................................GCA...GT.............G....A.............A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  R  I  Y  Y  N  P  S  L  K  G  L  V  T  M  S  V  D  T  S 
                    Query_1454   91   CTGGAGTGGATTGGGTACATCTATTACGGTGGGAGGATCTACTACAACCCGTCCCTCAAGGGTCTAGTTACCATGTCAGTAGACACGTCT  180
V  92.0% (229/249)  IGHV4-31*01  139  ...........................A.......C.C......................A.............A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  V  N  S  V  S  P  A  D  T  A  V  Y  Y  C  T  R  S  R  G  G  D  C  S 
                    Query_1454   181  AAGAACCAGTTCTCCCTGAAGGTGAATTCTGTGAGTCCCGCGGACACGGCCGTCTATTACTGTACGAGATCAAGGGGGGGGGATTGCAGT  270
V  92.0% (229/249)  IGHV4-31*01  229  .....................C...GC.......C.G................G.........G.....---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD2-2*01   6    ----------------------------------------------------------------------------------....T...  13

                                      CDR3-IMGT-------------------------->                                 
                                       S  K  T  C  H  F  S  Y  G  L  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_1454   271  AGTAAAACCTGCCACTTCTCCTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  339
D  91.7% (11/12)    IGHD2-2*01   14   ....-----------------------------------------------------------------  17
J  92.9% (52/56)    IGHJ6*02     7    -------------...A..A.......A.............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_159567

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1455   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1455   91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*01  139  ........GT........T.......G...............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_1455   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.5% (234/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1455   271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_159566

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           268     6e-74
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTG	GCAGGGGCTGG	CACGAACTTCTATCCCGACGAAC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATCTGGCAGGGGCTGGCACGAACTTCTATCCCGACGAACTGGACGTC	VKDLAGAGTNFYPDELDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	13	8	0	61.9
FR3-IMGT	124	237	114	97	17	0	85.1
CDR3-IMGT (germline)	238	245	8	6	2	0	75
Total	N/A	N/A	245	208	37	0	84.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  P  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1456   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCCCTGGCTTCTACTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  84.9% (208/245)  IGHV4-59*01  49   .............................T.........AG.A.T.A...........................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  F  Y  Y  N  G  E  S  N  Y  N  P  S  L  K  S  R  V  S  I  S  L  G  M  S  K  S 
                    Query_1456   91   TGGATTGGCCACTTCTACTACAATGGCGAGTCCAACTACAATCCCTCCCTCAAGAGTCGAGTCTCCATTTCTCTGGGCATGTCCAAGAGT  180
V  84.9% (208/245)  IGHV4-59*01  139  ........GT.TA....T....G...GAGCA..........C.....................A....A..AG.A.A..C........AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  F  T  S  V  T  A  A  D  T  A  V  Y  F  C  V  K  D  L  A  G  A  G  T  N  F 
                    Query_1456   181  CAGTTCTCCCTGAAGTTCACTTCTGTGACCGCTGCGGACACTGCCGTGTATTTTTGTGTGAAAGATCTGGCAGGGGCTGGCACGAACTTC  270
V  84.9% (208/245)  IGHV4-59*01  229  ...............C.G.GC....................G..........AC....C..G...-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.9% (10/11)    IGHD6-19*01  8    ---------------------------------------------------------------------....T......----------  18

                                      -------------------->                                 
                                       Y  P  D  E  L  D  V  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_1456   271  TATCCCGACGAACTGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTCA  324
J  97.6% (40/41)    IGHJ6*02     22   -------------........................C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_159560

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           361     4e-102
IGHD3-10*01                                                                                           14.1    8.1   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-10*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGTA	GGG	CGGGGAG	AGGGGG	CTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGGGCGGGGAGAGGGGGCTTGGACTTC	RAGRGGLDF	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	110	4	0	96.5
CDR3-IMGT (germline)	249	249	1	1	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_1457   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  96.4% (240/249)  IGHV3-73*01  47   .........A................................................................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  H  I  R  S  I  S  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_1457   91   AGTGGGTTGGCCATATTAGAAGCATCTCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATG  180
V  96.4% (240/249)  IGHV3-73*01  137  ............G...........AAG...............................................................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  E  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  D  *  C  R  A  G  R  G  G  L  
                    Query_1457   181  ATTCAGAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTCGATTAGTGTAGGGCGGGGAGAGGGGGCTTGG  270
V  96.4% (240/249)  IGHV3-73*01  227  .....A....................................................GT....C....---------------------  295
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  100.0% (7/7)     IGHD3-10*01  15   ------------------------------------------------------------------------.......-----------  21
J  95.5% (42/44)    IGHJ4*02     5    -------------------------------------------------------------------------------------...T.  9

                                      ---->                                  
                                      D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1457   271  ACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  95.5% (42/44)    IGHJ4*02     10   ...A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_159563

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           291     5e-81
IGHD7-27*01                                                                                           18.0    0.59 
IGHJ3*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCGACTTGAAC	AACTGGGGA	TGGGCAGGGGAGGGTGTTTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCGACTTGAACAACTGGGGATGGGCAGGGGAGGGTGTTTATGATGTC	ATDLNNWGWAGEGVYDV	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	243	4	4	0	0	100
Total	N/A	N/A	240	213	27	0	88.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  A  S  I  S  R  Y  Y  W  N  W  I  R  Q  P  P  G  K  A  M  E  
                    Query_1458   4    CCCTGAGACTCTCCTGCAGTGTCTCTGGTGCCTCCATCAGTCGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGCAATGGAGT  93
V  88.8% (213/240)  IGHV4-59*01  50   .....TCC...A......C...........G..........A............G..........................G.C......  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  T  Y  H  T  G  D  T  D  Y  N  P  S  L  R  N  R  V  A  I  S  M  D  A  S  K  N  
                    Query_1458   94   GGATCGGATATACCTATCACACTGGGGACACCGACTACAACCCCTCCCTCAGGAATCGAGTCGCCATATCAATGGACGCGTCCAAGAACC  183
V  88.8% (213/240)  IGHV4-59*01  140  ....T..G....T....T...G....AG....A..................A..G.......A........G.A...A............  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  D  L  N  N  W  G  W  A  G  
                    Query_1458   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACGGCTGCGGACACGGCCGTATACTACTGTGCGACCGACTTGAACAACTGGGGATGGGCAGGGG  273
V  88.8% (213/240)  IGHV4-59*01  230  ............................C.................G..T..........------------------------------  289
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (9/9)     IGHD7-27*01  3    -----------------------------------------------------------------------.........----------  11

                                      ---------------->                                  
                                      E  G  V  Y  D  V  W  G  Q  G  G  M  V  T  V  S  S  
                    Query_1458   274  AGGGTGTTTATGATGTCTGGGGCCAAGGGGGAATGGTCACCGTCTCTTCAG  324
J  95.1% (39/41)    IGHJ3*01     10   ----------...................AC....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_159562

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           346     2e-97
IGHD3-3*01                                                                                            35.3    4e-06
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTCGCCAA	ATTATGATTTCTGGAATGGTTATTATA	TTACCAAAAAAGGA	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCGCCAAATTATGATTTCTGGAATGGTTATTATATTACCAAAAAAGGAGCTTTTGATATC	ARESPNYDFWNGYYITKKGAFDI	240	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  T  S  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1459   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCACTAGCAACTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.7% (234/247)  IGHV3-53*01  47   ..........................................G..............G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  F  G  S  D  H  T  D  Y  A  D  S  V  R  G  R  F  T  I  S  S  D  N  S  K  
                    Query_1459   91   AGTGGGTCTCAGTTATTTTTGGCAGTGATCACACAGACTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGCGACAATTCCAAGA  180
V  94.7% (234/247)  IGHV3-53*01  137  ..................A.A..G...G.AG....T..................A.....................A.............  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------------C
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  S  P  N  Y  D  F  W  
                    Query_1459   181  ACACACTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAGAGAGTCGCCAAATTATGATTTCTGGA  270
V  94.7% (234/247)  IGHV3-53*01  227  ....G............................................G.................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  88.9% (24/27)    IGHD3-3*01   3    ---------------------------------------------------------------------------....C.....T....  17

                                      DR3-IMGT----------------------------->                                  
                                      N  G  Y  Y  I  T  K  K  G  A  F  D  I  W  G  H  G  T  M  V  T  V  S  S  
                    Query_1459   271  ATGGTTATTATATTACCAAAAAAGGAGCTTTTGATATCTGGGGCCACGGGACAATGGTCACCGTCTCTTCAG  342
D  88.9% (24/27)    IGHD3-3*01   18   G...........------------------------------------------------------------  29
J  97.8% (45/46)    IGHJ3*02     5    --------------------------....................A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_139411

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            335     4e-94
IGHD2-15*01                                                                                           25.7    0.003
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAGTTCACCA	TGTAGTGGTGGTA	CATGTTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAGTTCACCATGTAGTGGTGGTACATGTTATGATGCCTTCGACATC	ARDSSPCSGGTCYDAFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  S  N  S  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1460   1    GGTCCCTGAGACTCTCCTGTGTAGCGTCTGGATTCTCGTTTAGTAATTCTTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-7*01   47   .....................C...C.........A.C.......GC.A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  R  K  D  E  T  A  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1460   91   AGTGGGTGGCCAACATAAGGAAAGATGAAACTGCGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.8% (232/250)  IGHV3-7*01   137  ..................A.C......G..G..A....T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  S  L  Q  M  N  S  L  T  A  E  D  T  A  I  Y  Y  C  A  R  D  S  S  P  C  S  G  
                    Query_1460   181  AGAACTCACTGTCTCTGCAAATGAACAGCCTGACAGCCGAGGACACGGCTATTTATTACTGTGCGAGAGACAGTTCACCATGTAGTGGTG  270
V  92.8% (232/250)  IGHV3-7*01   227  ............A....................G................G.G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD2-15*01  8    --------------------------------------------------------------------------------..........  17

                                      IMGT--------------------->                                  
                                      G  T  C  Y  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1460   271  GTACATGTTATGATGCCTTCGACATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  330
D  100.0% (13/13)   IGHD2-15*01  18   ...---------------------------------------------------------  20
J  94.0% (47/50)    IGHJ3*02     1    ----------......T..T..T.....................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_139410

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           294     7e-82
IGHD1-26*01                                                                                           10.3    128  
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	TCGCATCGTCATGCGGACTTCGGCC	GGGAG	ATTAAACTTCA	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGATCGCATCGTCATGCGGACTTCGGCCGGGAGATTAAACTTCAACGGTTTGGACGTC	AGDRIVMRTSAGRLNFNGLDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  L  T  T  D  E  M  Y  W  V  R  Q  T  P  G  K  G  L  
                    Query_1461   1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTGGATTCACTCTCACTACTGATGAAATGTACTGGGTCCGCCAGACTCCAGGGAAGGGGCTGG  90
V  87.6% (219/250)  IGHV3-48*03  47   .....................C..C............CT...G..G.T........A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  N  I  G  S  S  G  N  A  I  Y  N  E  E  F  V  K  G  R  F  I  V  S  R  D  G  A  
                    Query_1461   91   AGTGGATTTCAAACATTGGTAGTAGTGGTAATGCCATCTACAACGAAGAATTTGTGAAGGGCCGATTCATCGTCTCCAGAGACGGCGCCA  180
V  87.6% (219/250)  IGHV3-48*03  137  .....G.....T.....A............G.A....A...T...C...C.C.................C.A...........AA.....  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      R  N  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  G  V  Y  Y  C  A  G  D  R  I  V  M  R  T  
                    Query_1461   181  GGAATTCACTGTTTCTGCAGATGAACAGTCTGAGAGTCGAGGACACGGGTGTTTATTACTGTGCGGGAGATCGCATCGTCATGCGGACTT  270
V  87.6% (219/250)  IGHV3-48*03  227  A...C.......A......A........C.......C...........C................A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      DR3-IMGT-------------------------->                                
                                      S  A  G  R  L  N  F  N  G  L  D  V  W  G  Q  G  T  T  V  I  V  S  S
                    Query_1461   271  CGGCCGGGAGATTAAACTTCAACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTTATCGTCTCCTC  337
D  100.0% (5/5)     IGHD1-26*01  9    -----.....---------------------------------------------------------  13
J  93.5% (43/46)    IGHJ6*02     16   ---------------------.....A............................C.C.........  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_139417

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     5e-96
IGHD4-17*01                                                                                           14.1    8.4  
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-17*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	CTACGGT	ACCTACGCGCGAACGTCCGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACGGTACCTACGCGCGAACGTCCGGTTTTGATTTC	ARDYGTYARTSGFDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  N  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1462   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAATTCCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-21*01  47   ....................................C.....G.AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  I  S  Y  I  S  G  S  S  S  H  I  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1462   91   TGTGGATCTCATACATTAGTGGTAGTAGTAGTCACATATATTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.6% (234/250)  IGHV3-21*01  137  A....G......C.......A...........T.......C............G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      N  N  S  L  Y  L  Q  L  N  T  L  T  A  D  D  T  A  V  Y  Y  C  A  R  D  Y  G  T  Y  A  R  
                    Query_1462   181  ACAACTCACTGTATCTGCAATTGAACACCCTGACAGCCGACGACACGGCTGTGTATTACTGTGCGAGAGACTACGGTACCTACGCGCGAA  270
V  93.6% (234/250)  IGHV3-21*01  227  .G..................A......G.....G......G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD4-17*01  4    ----------------------------------------------------------------------.......-------------  10

                                      ---------------->                                  
                                      T  S  G  F  D  F  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1462   271  CGTCCGGTTTTGATTTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  97.7% (43/44)    IGHJ3*01     7    -------.......G....................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_139416

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           350     8e-99
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCAA	C	TTACGT	CCAGTCTAATCCTGAACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACTTACGTCCAGTCTAATCCTGAACCTGACTAC	ATYVQSNPEPDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	235	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  I  W  V  R  Q  A  P  G  K  G  L  
                    Query_1463   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAGCTACTGGATGATCTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  95.5% (235/246)  IGHV3-74*01  47   ...........................................T............CA................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  S  N  D  G  T  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1463   91   TGTGGGTCTCACGTATTAGTAATGACGGGACTAGCACAGGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.5% (235/246)  IGHV3-74*01  137  ..................A..G...T....G.......A...................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  T  Y  V  Q  S  N  P  E  
                    Query_1463   181  AGAACACGCTGTATCTGCAGATGAACAGTCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCAACTTACGTCCAGTCTAATCCTGAAC  270
V  95.5% (235/246)  IGHV3-74*01  227  ...................A....................G...........G.............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-16*01  10   -------------------------------------------------------------------......-----------------  15

                                      ------->                                  
                                      P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1463   271  CTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (41/41)   IGHJ4*02     8    -.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_139415

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           316     2e-88
IGHD6-6*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1464   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.7% (225/248)  IGHV3-21*01  47   ............................T............AG...C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  G  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  G  
                    Query_1464   91   AGTGGGTCTCATCCATCAGTAGTGGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  90.7% (225/248)  IGHV3-21*01  137  ................T......A.T...AGT......T.C..C..A......G..A..............................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_1464   181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  90.7% (225/248)  IGHV3-21*01  227  ....C..................AA...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1464   271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_139414

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_1465   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_1465   91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_1465   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_1465   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_183827

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           325     3e-91
IGHD1-1*01                                                                                            14.1    8.8  
IGHJ2*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-1*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AATCCTCCTTCGAAGGGACCAAGGC	CAACTGG	CCGGG	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAAATCCTCCTTCGAAGGGACCAAGGCCAACTGGCCGGGTGGTACTTCGATCTC	VREILLRRDQGQLAGWYFDL	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  D  F  S  G  Y  S  R  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1466   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGCTTCGACTTCAGTGGTTATAGCAGGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-21*01  47   .....................C.........A...AC.......A.C.......T...................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  G  N  T  Y  I  F  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_1466   91   AGTGGGTCTCATCCATTAGTAGTGGGAATACTTACATTTTCTACGCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  91.6% (229/250)  IGHV3-21*01  137  .......................A.T.G..G......A.A...............................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  S  L  Q  M  S  G  L  R  A  D  D  T  A  V  Y  Y  C  V  R  E  I  L  L  R  R  D  
                    Query_1466   181  AGAACTCACTGTCTCTACAAATGAGCGGCCTGAGAGCCGACGACACGGCTGTATATTACTGTGTGAGAGAAATCCTCCTTCGAAGGGACC  270
V  91.6% (229/250)  IGHV3-21*01  227  ............A...G.......A.A.............G...........G..........C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      Q  G  Q  L  A  G  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_1466   271  AAGGCCAACTGGCCGGGTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCCTCAG  336
D  100.0% (7/7)     IGHD1-1*01   5    -----.......------------------------------------------------------  11
J  98.0% (48/49)    IGHJ2*01     5    -----------------....................................A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_183824

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           428     3e-122
IGHD2-15*01                                                                                           27.6    8e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TGGGGA	GATATTGTACTGATGGTACCTGC	CCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGGGAGATATTGTACTGATGGTACCTGCCCTTTTGACTCC	ARLGRYCTDGTCPFDS	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	282	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  Q  G  S  G  Y  S  F  P  S  H
                    Query_1467   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTCAGGGTTCTGGATACAGCTTTCCCAGCCA  90
V  97.2% (282/290)  IGHV5-51*01  6    .....................A............................A..........A....................A.....T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_1467   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGAGACTCTGATACCAGATACAGCCC  180
V  97.2% (282/290)  IGHV5-51*01  96   ..................................................................T.......................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  I  A
                    Query_1467   181  GTCCTTCCAGGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACATCGC  270
V  97.2% (282/290)  IGHV5-51*01  186  .........A............................................................................C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        M  Y  Y  C  A  R  L  G  R  Y  C  T  D  G  T  C  P  F  D  S  W  G  Q  G  T  L  V  S  V  S
                    Query_1467   271  CATGTATTACTGTGCGAGACTGGGGAGATATTGTACTGATGGTACCTGCCCTTTTGACTCCTGGGGCCAGGGAACCCTGGTCTCCGTCTC  360
V  97.2% (282/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  87.0% (20/23)    IGHD2-15*01  3    --------------------------.........G..G.....G....-----------------------------------------  25
J  95.3% (41/43)    IGHJ4*02     6    ----------------------------------------------------.......A......................A.......  43

                                           
                                        S  
                    Query_1467   361  CTCAG  365
J  95.3% (41/43)    IGHJ4*02     44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_183823

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*14                                                                                           392     2e-111
IGHD3-22*01                                                                                           18.0    0.69  
IGHJ3*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*14	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAAAGAAACA	TATTCCTATGACAGT	GGCAGTGGAC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAAAGAAACATATTCCTATGACAGTGGCAGTGGACCTTTTGATATC	ARGKETYSYDSGSGPFDI	291	344	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	74	1	0	98.7
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	18	6	0	75
FR3-IMGT	177	290	114	103	11	0	90.4
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	273	22	0	92.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_1468   3    CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCTCC  92
V  92.5% (273/295)  IGHV1-69*14  1    ...........G...........................................................................AG.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  V  P  M  F  P  T  A  D  S 
                    Query_1468   93   AGTTATGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCGTACCTATGTTTCCAACAGCAGACTCC  182
V  92.5% (273/295)  IGHV1-69*14  91   ..C..........G.................................................A.C.....C...GGT......A...A.  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       P  E  K  F  E  D  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_1468   183  CCCGAGAAGTTCGAGGACAGAGTCACGATTACCGCGGACAAATCAACGAGCACAGCCTACATGGAACTGAGCAGCCTGAGATCTGAGGAC  272
V  92.5% (273/295)  IGHV1-69*14  181  G.AC........C...G...........................C....................G........................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  M  Y  Y  C  A  R  G  K  E  T  Y  S  Y  D  S  G  S  G  P  F  D  I  W  G  Q  G  T  M 
                    Query_1468   273  ACGGCCATGTATTATTGTGCGAGAGGGAAAGAAACATATTCCTATGACAGTGGCAGTGGACCTTTTGATATCTGGGGCCAAGGGACAATG  362
V  92.5% (273/295)  IGHV1-69*14  271  ......G.......C..........-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  86.7% (13/15)    IGHD3-22*01  2    ------------------------------------....A......T...---------------------------------------  16
J  100.0% (45/45)   IGHJ3*02     6    -------------------------------------------------------------.............................  34

                                                      
                                       V  T  V  S  S  
                    Query_1468   363  GTCACCGTCTCTTCAG  378
J  100.0% (45/45)   IGHJ3*02     35   ................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_183822

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            333     1e-93
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	N/A	TGGGGG	GGGCGGGATGGCAACCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGGGGGGCGGGATGGCAACCCGACTAC	VGGAGWQPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  L  I  F  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1469   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGACTCATCTTTAGTGACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.8% (228/243)  IGHV3-7*01   47   ....................G...........T...C.......AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  E  Q  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1469   91   AGTGGGTGGCCAACATAGAGCAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.8% (228/243)  IGHV3-7*01   137  .................A....................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  V  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  V  G  G  A  G  W  Q  P  D  
                    Query_1469   181  AGAATTCAGTGTTTCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCTGTGTACTTTTGTGTGGGGGGGGCGGGATGGCAACCCGACT  270
V  93.8% (228/243)  IGHV3-7*01   227  ....C...C...A............C.............................T.AC....---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (6/6)     IGHD3-16*01  17   ---------------------------------------------------------------......---------------------  22
J  100.0% (38/38)   IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                
                                      Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1469   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  304
J  100.0% (38/38)   IGHJ4*02     13   ..................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_183820

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-72*01                                                                                           378     3e-107
IGHD6-19*01                                                                                           14.1    8.4   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-72*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATCCTCTTT	CAGTGGC	CCTG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGAGAATCCTCTTTCAGTGGCCCTGACTTTGACTAC	ARESSFSGPDFDY	249	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	112	2	0	98.2
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	249	7	0	97.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  D  Y  Y  L  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_1470   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTCAGTGACTACTATTTGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.3% (249/256)  IGHV3-72*01  47   ........................C......................C....CA....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  T  R  N  K  A  N  S  Y  T  P  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_1470   91   AGTGGGTTGGCCGTACTAGAAACAAAGCTAACAGTTACACCCCAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  97.3% (249/256)  IGHV3-72*01  137  .........................................A................................................  226
                                      E  W  V  G  R  T  R  N  K  A  N  S  Y  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      D  S  Q  N  S  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  E  S  S  F  S  
                    Query_1470   181  ATTCACAGAACTCACTGTATCTGCAAATGAACAGCCTGAAGACCGAGGACACGGCCGTGTATTACTGTGCTAGAGAATCCTCTTTCAGTG  270
V  97.3% (249/256)  IGHV3-72*01  227  .....A..................................A...................................--------------  302
                                      D  S  K  N  S  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R                 
D  100.0% (7/7)     IGHD6-19*01  9    -------------------------------------------------------------------------------------.....  13

                                      GT-------------->                                  
                                      G  P  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1470   271  GCCCTGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (7/7)     IGHD6-19*01  14   ..-------------------------------------------------  15
J  100.0% (45/45)   IGHJ4*02     4    ------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_183829

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         360     1e-101
IGHD3-16*02                                                                                           25.7    0.003 
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGCAGCC	TGGGGGAATTATCGTT	C	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGCAGCCTGGGGGAATTATCGTTCCTTTGACTAC	ARAAWGNYRSFDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_1471     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTATTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  96.4% (239/248)  IGHV4-30-4*01  49   .................................................A...C.A.....GT...........................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  N  I  H  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1471     91   CTGGAGTGGATTGGGAACATCCATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  96.4% (239/248)  IGHV4-30-4*01  139  ...............T.....T....................................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  A  A  W  G  N  Y  R 
                    Query_1471     181  AAGAACCACTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTTCTGTGCCAGGGCAGCCTGGGGGAATTATCGT  270
V  96.4% (239/248)  IGHV4-30-4*01  229  ........G.................................................A.........----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  93.8% (15/16)    IGHD3-16*02    17   ---------------------------------------------------------------------------.......G.......  31

                                        ----------->                                  
                                         S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1471     271  TCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  93.8% (15/16)    IGHD3-16*02    32   .---------------------------------------------  32
J  100.0% (44/44)   IGHJ4*02       5    --............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_183828

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           400     9e-114
IGHD2-2*01                                                                                            19.9    0.17  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGGGA	AGTACCAGCT	CCTCAACCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGGAAGTACCAGCTCCTCAACCCTGACTAC	ARGGKYQLLNPDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N  N  Y
                    Query_1472   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACGTTCAACAACTA  90
V  94.1% (273/290)  IGHV1-69*01  6    ..................G...........................................................C....G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  T  V  F  G  T  T  N  Y  A  Q
                    Query_1472   91   TGCTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCATCATCACTGTCTTTGGAACAACAAACTACGCACA  180
V  94.1% (273/290)  IGHV1-69*01  96   .........C............................................G......C..A.......T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  I  T  I  T  A  D  E  S  T  R  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_1472   181  GAAGTTCCAGGGCAGAATCACCATTACCGCGGACGAATCGACGAGGACAGCCTACATGGAGCTGAGTAGCCTAAGATCTGAGGACACGGC  270
V  94.1% (273/290)  IGHV1-69*01  186  ................G....G.................C.....C....................C.....G.................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  G  G  K  Y  Q  L  L  N  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1472   271  CGTTTATTACTGTGCGAGAGGCGGGAAGTACCAGCTCCTCAACCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  94.1% (273/290)  IGHV1-69*01  276  ...G................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD2-2*01   14   --------------------------..........--------------------------------------------------  23
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_311237

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           338     5e-95
IGHD2-2*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCTAAATGGATTCTCG	ATTGTGCTACTACCGGTTGCTAT	CTG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCTAAATGGATTCTCGATTGTGCTACTACCGGTTGCTATCTGGACTAC	ARDPKWILDCATTGCYLDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  V  S  G  F  P  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_1473   1    GGTCCCTGAGACTCTCCTGTTCAGTCTCTGGATTCCCCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-11*01  47   ....................G...C..........A......................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  K  I  T  P  S  G  S  A  I  D  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_1473   91   AGTGGGTTTCAAAGATCACTCCTAGTGGCAGTGCCATAGACTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  93.2% (233/250)  IGHV3-11*01  137  ...........T.C..T.G.AG......T...A.....T..................A................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  L  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  N  C  A  R  D  P  K  W  I  L  D  
                    Query_1473   181  AGAACTTACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATATAACTGTGCGAGAGACCCTAAATGGATTCTCGATT  270
V  93.2% (233/250)  IGHV3-11*01  227  ......C...........................................G.G...T.............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  78.3% (18/23)    IGHD2-2*01   6    ---------------------------------------------------------------------------------------...  8

                                      -IMGT----------------------->                                  
                                      C  A  T  T  G  C  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1473   271  GTGCTACTACCGGTTGCTATCTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  78.3% (18/23)    IGHD2-2*01   9    ..AG..G....A.C......-------------------------------------------  28
J  100.0% (40/40)   IGHJ4*02     9    -----------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_311236

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD2-8*02                                                                                            14.1    9.6   
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGT	TACTGGT	ACCAACGCCAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTC	ARLVTGTNATYGLDV	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	24	0	0	100
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	112	2	0	98.2
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	286	7	0	97.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_1474   3    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCA  92
V  97.6% (286/293)  IGHV5-51*03  2    ....G.....G..........................................................G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  R  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_1474   93   GCTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGAGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  182
V  97.6% (286/293)  IGHV5-51*03  92   ............G..................................T..........................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_1474   183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  97.6% (286/293)  IGHV5-51*03  182  .......................................A.........C........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  Y  C  A  R  L  V  T  G  T  N  A  T  Y  G  L  D  V  W  G  Q  G  S  K  V  T  V  
                    Query_1474   273  CCGCCATGTATTACTGTGCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTCTGGGGCCAAGGGAGCAAGGTCACCGTCT  362
V  97.6% (286/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD2-8*02   10   ----------------------------.......-------------------------------------------------------  16
J  93.9% (46/49)    IGHJ6*02     14   ----------------------------------------------.......A.....................C..C...........  57

                                           
                                      S  S 
                    Query_1474   363  CCTCA  367
J  93.9% (46/49)    IGHJ6*02     58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_200762

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           353     9e-100
IGHD2-15*01                                                                                           12.2    32    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAT	TAGCTG	TATCCGCGCCCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTAGCTGTATCCGCGCCCTACTACTTTGACTAC	ARRLAVSAPYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  T  N  S  N  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_1475   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCACCAATAGTAATTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.2% (238/250)  IGHV4-39*01  49   ...............................G........G..G.....G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1475   91   CTGGAGTGGATTGCGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  95.2% (238/250)  IGHV4-39*01  139  .............G..................................................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  V  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  R  L  A  V  S  A  P 
                    Query_1475   181  AAGAACCAGTTCTCCCTGAGGGTGACCTCTGTGACCGCCGCAGACACGGCTCTATATTACTGTGCGAGACGATTAGCTGTATCCGCGCCC  270
V  95.2% (238/250)  IGHV4-39*01  229  ...................A.C...G.........................G.G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-15*01  19   -------------------------------------------------------------------------......-----------  24

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  S  L  V  A  V  S  S  
                    Query_1475   271  TACTACTTTGACTACTGGGGCCAGGGATCCCTGGTCGCCGTCTCCTCAG  319
J  95.8% (46/48)    IGHJ4*02     1    -..........................A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_200763

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGTGAGGAAGGA	TACTATGATACTAGTGGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGTGAGGAAGGATACTATGATACTAGTGGTTATTCGGACTAT	AKDGEEGYYDTSGYSDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  T  P  G  K  G  L  
                    Query_1476   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGATATGCCATGTCCTGGGTCCGCCAGACTCCAGGGAAGGGCCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ...........................................C..C.........AG.............G.............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  V  S  G  S  G  G  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1476   91   AGTGGGTCTCAACAGTGAGTGGTAGTGGAGGTGGCACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  ...........G.TA.T...........T...A..........C..............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  I  Y  Y  C  A  K  D  G  E  E  G  Y  Y  
                    Query_1476   181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAACCGAGGACACGGCCATATATTACTGTGCGAAAGATGGTGAGGAAGGATACTATG  270
V  93.6% (234/250)  IGHV3-23*01  227  ..............C....................G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.5% (21/22)    IGHD3-22*01  5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                      D  T  S  G  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1476   271  ATACTAGTGGTTATTCGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.5% (21/22)    IGHD3-22*01  12   ...G...........------------------------------------------  26
J  97.5% (39/40)    IGHJ4*02     9    -----------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_200764

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           360     1e-101
IGHD1-26*01                                                                                           16.1    2.3   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTCACCCT	TAGCGGGAACTACT	GCACTTCGCACGGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACTCACCCTTAGCGGGAACTACTGCACTTCGCACGGGGTACTTTGACTCC	AKDSPLAGTTALRTGYFDS	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1477   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTCGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-30*18  47   ...................................A........A.............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1477   91   AGTGGGTGGCAGTTATTTGGTATGATGGAAGTAATAAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (240/250)  IGHV3-30*18  137  ................A.CA....................C.................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  F  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  H  C  A  K  D  S  P  L  A  G  T  
                    Query_1477   181  AGAACACGCTGTTTCTGCAAATGAACAGCCTGAGAGTTGATGACACGGCTGTGTATCACTGTGCGAAAGACTCACCCTTAGCGGGAACTA  270
V  96.0% (240/250)  IGHV3-30*18  227  ............A.......................C...G...............T.............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  85.7% (12/14)    IGHD1-26*01  5    ------------------------------------------------------------------------------...T....G...  16

                                      -IMGT----------------------->                                  
                                      T  A  L  R  T  G  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1477   271  CTGCACTTCGCACGGGGTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  85.7% (12/14)    IGHD1-26*01  17   ..-------------------------------------------------------------  18
J  97.8% (45/46)    IGHJ4*02     3    -----------------..........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_311232

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            360     1e-101
IGHD4-17*01                                                                                           14.1    8.1   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAAGG	CGGTTACTAC	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAAGGCGGTTACTACCCCTTTGACTAC	ARDKGGYYPFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  T  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1478   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGGTACCTTTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-7*03   47   .........................................A...G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1478   91   AGTGGGTGGCCAACATAAACCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-7*03   137  ...................G......................................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  V  H  L  Q  M  N  G  L  R  G  E  D  T  A  L  Y  Y  C  A  R  D  K  G  G  Y  Y  P  
                    Query_1478   181  AAAACTCAGTGCATCTGCAAATGAACGGCCTGAGAGGCGAGGACACGGCCCTGTATTACTGTGCGAGAGATAAAGGCGGTTACTACCCCT  270
V  96.0% (240/250)  IGHV3-7*03   227  .G......C..T..............A.........C.............G...................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD4-17*01  7    ----------------------------------------------------------------------------....G.....----  16
J  97.4% (38/39)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                             
                                      F  D  Y  W  G  Q  G  T  P  V  T  V  S
                    Query_1478   271  TTGACTACTGGGGCCAGGGAACCCCGGTCACCGTCTC  307
J  97.4% (38/39)    IGHJ4*02     7    ........................T............  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_311231

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           21.8    0.040
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	C	ATAGAAGTGGCTGG	CCGTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACATAGAAGTGGCTGGCCGTTTGATGCTTTCGAGATC	ARHRSGWPFDAFEI	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  Y  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_1479   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAATTATCACTACTGGAGCTGGATCCGGCAGTCTCCAGGGAAGGGACTGGAGT  93
V  92.1% (223/242)  IGHV4-59*01  50   .....TCC...A...........................G.AG.T.......................C.C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  I  Y  N  P  S  L  E  S  R  V  T  I  S  A  D  T  S  K  K  
                    Query_1479   94   GGATTGGCTATATCTATTACAGTGGGAGCACCATCTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAGC  183
V  92.1% (223/242)  IGHV4-59*01  140  .......G.........................A................A.....................T...............C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  S  A  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  R  S  G  W  P  F  D  A  
                    Query_1479   184  AGTTCTCCCTGAAGCTGAGCGCTGTAACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGACATAGAAGTGGCTGGCCGTTTGATGCTT  273
V  92.1% (223/242)  IGHV4-59*01  230  ....................T....G....................G............A..----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  92.9% (13/14)    IGHD6-19*01  5    ---------------------------------------------------------------....C.........-------------  18
J  88.0% (44/50)    IGHJ3*02     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  E  I  W  G  Q  G  I  K  V  S  V  S  S  
                    Query_1479   274  TCGAGATCTGGGGCCAGGGGATAAAGGTCTCCGTCTCTTCAG  315
J  88.0% (44/50)    IGHJ3*02     9    .T..T...........A....C..T....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_298429

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           310     1e-86
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	19	5	0	79.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	232	215	17	0	92.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  N  N  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  
                    Query_1480   14   GTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCGATTC  103
V  92.7% (215/232)  IGHV3-23*01  65   ........................G..G.T.....A....C............................................T...A  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      L  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  K  N  T  L  Y  L  
                    Query_1480   104  TTGGGAGCGGTAGTAGCACATACTACTCAGACTCCGTAAAGGGCCGGTTCACCATCTCCAGAGACTATTCCAAGAACACGCTGTATCTGC  193
V  92.7% (215/232)  IGHV3-23*01  155  G...T..T...G..............G..........G...........................A........................  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  Y  S  P  L  D  Y  
                    Query_1480   194  AAATGAACAGCCTTAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTACT  283
V  92.7% (215/232)  IGHV3-23*01  245  .............G....................A..............A..--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------..........---------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------------.........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1480   284  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (42/42)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_298427

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            420     7e-120
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	274	5	0	98.2


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_1481  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  98.2% (274/279)  IGHV6-1*01  26   ...........................................................G......G....AG.................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_1481  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.2% (274/279)  IGHV6-1*01  116  ..........................................................................................  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_1481  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.2% (274/279)  IGHV6-1*01  206  ..............A...........................................................................  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------CDR3-IMGT--------->                                  
                                     C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1481  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  98.2% (274/279)  IGHV6-1*01  296  .........---------------------------------------------------------  304
                                     C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02    4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_298425

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           318     6e-89
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GGGAC	TATAGCAGTGGCTGG	CACACAGTCCGAGGCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGGACTATAGCAGTGGCTGGCACACAGTCCGAGGCCACTGGTACCTCGATCTC	ARGDYSSGWHTVRGHWYLDL	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  S  F  S  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1482   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCAGCTTCAGTAATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-48*03  47   ........................C...........C........G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  V  E  D  D  T  I  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  D  A  
                    Query_1482   91   AGTGGGTTTCATACATTAGTGTTGAGGATGACACCATATACTATGCAGACTCTGTGCAGGGCCGATTCACCATCTCCAGAGACGACGCCA  180
V  90.8% (226/249)  IGHV3-48*03  137  ....................AG.AGT.G.AGT...........C............A..........................A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  S  S  L  H  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  F  C  A  R  G  D  Y  S  S  G  W  
                    Query_1482   181  AGAGCTCACTGCATCTACAAATGAACAATTTGAGAGCCGAGGACACGGCTGTTTATTTCTGTGCCAGAGGGGACTATAGCAGTGGCTGGC  270
V  90.8% (226/249)  IGHV3-48*03  227  ...A.......T....G..........GCC...........................A......G....---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD6-19*01  4    --------------------------------------------------------------------------...............-  18

                                      R3-IMGT------------------------>                                  
                                      H  T  V  R  G  H  W  Y  L  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_1482   271  ACACAGTCCGAGGCCACTGGTACCTCGATCTCTGGGGCCGAGGCACCCTGGTCACTGTCTCCTCAG  336
J  96.1% (49/51)    IGHJ2*01     3    ---------------........T................T.........................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_298423

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD6-19*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCCTCCCCCCTCAC	TATATCAATGGCTGGTAC	T	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCCTCCCCCCTCACTATATCAATGGCTGGTACTTTTGCCTAC	RPPPSLYQWLVLLPT	237	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	101	51	48	2	1	94.1
CDR2-IMGT	102	122	21	19	2	0	90.5
FR3-IMGT	123	236	114	107	7	0	93.9
CDR3-IMGT (germline)	237	239	3	3	0	0	100
Total	N/A	N/A	240	225	14	1	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  P  P  G   R  D  W  S
                    Query_1483   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATAAGTAGTTATTACTGGAACTGGATCCGGCAGCCCCCAGG-AAGGGACTGGAG  89
V  93.8% (225/240)  IGHV4-59*08  49   ..................A...................C........C.......G.....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                        G  L  A  M  S  I  T  V  G  A  P  T  T  T  P  P  S  R  V  E  S  P  C  R  W  T  R  P  R  T
                    Query_1483   90   TGGATTGGCTATGTCTATTACAGTGGGAGCGCCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCGGTGGACTCGTCCAAGAAC  179
V  93.8% (225/240)  IGHV4-59*08  139  ........G...A.................A.....................................A..A..A...A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                        S  S  P  *  G  *  L  L  *  P  P  Q  T  R  P  C  I  T  V  R  P  P  P  S  L  Y  Q  W  L  V
                    Query_1483   180  CAGTTCTCCCTGAGGCTGACTTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGTCCTCCCCCCTCACTATATCAATGGCTGGT  269
V  93.8% (225/240)  IGHV4-59*08  229  .............A.....GC.......................................------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  88.9% (16/18)    IGHD6-19*01  4    --------------------------------------------------------------------------....G..G........  19

                                      ----------->                                  
                                        L  L  P  T  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_1483   270  ACTTTTGCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
D  88.9% (16/18)    IGHD6-19*01  20   ..--------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    ---....A......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_311239

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            313     1e-87
IGHD1-26*01                                                                                           19.9    0.15 
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-26*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCAGAC	AGTGGGAGCT	TCTCTAAT	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGCAGACAGTGGGAGCTTCTCTAATTGGTACTTCGATCTC	ARDADSGSFSNWYFDL	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	224	24	0	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  V  S  I  S  S  D  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_1484   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGTCTCCATCAGCAGTGATAACTGGTGGAGTTGGGTACGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.3% (224/248)  IGHV4-4*01   49   ...................C...........G.............AG..................C........................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  Q  I  F  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_1484   91   GAGTGGATTGGACAAATCTTTCATAGTGGCAGCACCAATTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACAAGTCTAAG  180
V  90.3% (224/248)  IGHV4-4*01   139  ...........GG......A.........G........C......................................A........C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  Q  F  S  L  K  V  N  S  V  S  A  A  D  T  A  I  Y  F  C  A  R  D  A  D  S  G  S  F  S 
                    Query_1484   181  AACCAGTTTTCCCTAAAAGTGAATTCTGTGAGTGCCGCGGACACGGCCATTTACTTCTGTGCGAGAGATGCAGACAGTGGGAGCTTCTCT  270
V  90.3% (224/248)  IGHV4-4*01   229  ........C.....G..GC...GC.......CC...............G.G..T.G............----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (10/10)   IGHD1-26*01  6    ---------------------------------------------------------------------------..........-----  15

                                      ----------------->                                  
                                       N  W  Y  F  D  L  W  G  P  G  T  L  V  T  V  S  S  
                    Query_1484   271  AATTGGTACTTCGATCTCTGGGGTCCTGGCACCCTGGTCACTGTCTCCTCAG  322
J  95.9% (47/49)    IGHJ2*01     5    ---....................C.G..........................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_311238

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         353     1e-99
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GATGGGGGAA	TATTACTTTGATA	CTGATTATTCGGGGTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGATGGGGGAATATTACTTTGATACTGATTATTCGGGGTGGTACTTTGACTAC	ARMGEYYFDTDYSGWYFDY	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  M  G 
                    Query_1485     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAACCCCCAGGGATGGGC  90
V  95.6% (237/248)  IGHV4-30-4*01  49   ..................A..............................A........................G..........A....  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  F  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  N  I  L  V  D  T  S 
                    Query_1485     91   CTGGAGTGGTTTGGGTACATCTACTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTAACATATTAGTGGACACGTCC  180
V  95.6% (237/248)  IGHV4-30-4*01  139  .........A.............T..........G...................................C.....C...A.........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  M  G  E  Y  Y  F  D 
                    Query_1485     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTTTATTACTGTGCCAGGATGGGGGAATATTACTTTGAT  270
V  95.6% (237/248)  IGHV4-30-4*01  229  .....................................................G..............----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  92.3% (12/13)    IGHD3-22*01    2    ------------------------------------------------------------------------------.......A....  13

                                        3-IMGT----------------------->                                  
                                         T  D  Y  S  G  W  Y  F  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_1485     271  ACTGATTATTCGGGGTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  334
D  92.3% (12/13)    IGHD3-22*01    14   .---------------------------------------------------------------  14
J  97.8% (45/46)    IGHJ4*02       3    ------------------..................................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_252189

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           360     1e-101
IGHD6-13*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTT	TATAACAGCAGTTGG	GTGCTCGA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTTATAACAGCAGTTGGGTGCTCGATGACTTC	ARDFYNSSWVLDDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  I  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1486   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAATCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-21*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  T  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1486   91   AGTGGGTCTCATCCATTAGTAGTAGTACTAGTTACATATATTATGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-21*01  137  ...........................G............C..C..............................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  R  S  L  Y  L  H  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  Y  N  S  S  W  
                    Query_1486   181  AGAGATCACTGTATCTGCACATGAACAACCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGATTTTTATAACAGCAGTTGGG  270
V  96.0% (240/250)  IGHV3-21*01  227  ...AC..............A.......G........................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD6-13*01  4    --------------------------------------------------------------------------....G......C...-  18

                                      ------------->                                
                                      V  L  D  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1486   271  TGCTCGATGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  316
J  97.4% (38/39)    IGHJ4*02     8    -------.....A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_252187

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_1487   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_1487   91   GAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ...................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_1487   181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1487   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_252185

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           364     5e-103
IGHD3-16*01                                                                                           14.1    8.2   
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GATG	TATGATT	TGGGCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGATGTATGATTTGGGCTACTACTTTGACTAC	AKMYDLGYYFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1488   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  97.2% (240/247)  IGHV3-23*01  47   ...............................................................................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  G  D  T  L  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1488   91   AGTGGGTCTCAGCTATTAGTGGTGGTGATACTCTCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  97.2% (240/247)  IGHV3-23*01  137  .......................A...G.GG.AG........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  M  Y  D  L  G  Y  Y  
                    Query_1488   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGATGTATGATTTGGGCTACTACT  270
V  97.2% (240/247)  IGHV3-23*01  227  ...................................................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  5    -----------------------------------------------------------------------.......------------  11
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1488   271  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (48/48)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_252184

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           257     1e-70
IGHD3-10*01                                                                                           14.1    8.9  
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACGGGGTGGGGA	ATGGCTGGGGAACTTACTATAA	T	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGGCCACGGGGTGGGGAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	GRGHGVGNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	21	3	6	70
FR2-IMGT	60	110	51	43	8	0	84.3
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	102	12	0	89.5
CDR3-IMGT (germline)	246	253	8	7	1	0	87.5
Total	N/A	N/A	250	209	35	6	83.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  T  F  G  D  S  G  Y  Y  W  N  W  R  R  Q  P  P  G  K  G  
                    Query_1489   4    CCCTGAGACTCTCCTGCGCTGTGTACGGTGGGACCTTCGGTGACAGTGGCTATTACTGGAACTGGCGCCGCCAGCCACCAGGGAAGGGCC  93
V  83.6% (209/250)  IGHV4-34*01  50   .....TCC...A..........C..T......T.....------.....T..C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  S  G  G  I  I  P  C  G  N  I  N  Y  N  Q  S  L  Q  R  R  V  T  T  S  V  D  T  T  
                    Query_1489   94   TGGAATGGAGTGGGGGAATCATTCCTTGTGGAAACATCAACTACAACCAGTCCCTCCAGAGGCGCGTCACCACCTCAGTAGACACGACCA  183
V  83.6% (209/250)  IGHV4-34*01  134  ....G....T.....A.....A..A.A......G..C...........C.......A....T..A.......TA............T...  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  G  R  G  H  G  V  G  N  G  
                    Query_1489   184  AGAACCAGTTCTCGCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGGGAGAGGCCACGGGGTGGGGAATGGCT  273
V  83.6% (209/250)  IGHV4-34*01  224  .............C.....GC............C........................C....C......--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  77.3% (17/22)    IGHD3-10*01  9    ------------------------------------------------------------------------------------....T.  14

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_1489   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  77.3% (17/22)    IGHD3-10*01  15   C...G.G...T.....-------------------------------------------------  30
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_252183

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            357     1e-100
IGHD2-2*01                                                                                            33.4    1e-05 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CT	TATTGTAGTAGTAGCATCTGCTA	CCA	TGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTTATTGTAGTAGTAGCATCTGCTACCATGACCAC	ATYCSSSICYHDH	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	237	9	0	96.3


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  V  T  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1490  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAGTCACCTTTAGTACCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.3% (237/246)  IGHV3-7*01  47   ................................T............G............................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  H  D  G  S  E  K  Y  Y  A  D  S  V  K  G  R  F  A  I  S  R  D  N  A  
                    Query_1490  91   AGTGGGTGGCCAACATAAAGCACGATGGAAGTGAGAAATACTATGCGGACTCTGTGAAGGGCCGATTCGCCATCTCCAGAGACAACGCCA  180
V  96.3% (237/246)  IGHV3-7*01  137  ......................A......................T......................A.....................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                     K  N  S  L  F  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  Y  C  S  S  S  I  C  
                    Query_1490  181  AGAACTCACTGTTTCTGCAAATGAGTAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGACTTATTGTAGTAGTAGCATCTGCT  270
V  96.3% (237/246)  IGHV3-7*01  227  ............A...........AC..........................G.............------------------------  292
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  91.3% (21/23)    IGHD2-2*01  5    --------------------------------------------------------------------.............C..G.....  26

                                     ---------->                                  
                                     Y  H  D  H  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_1490  271  ACCATGACCACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  315
D  91.3% (21/23)    IGHD2-2*01  27   .--------------------------------------------  27
J  95.1% (39/41)    IGHJ4*02    8    ----....T...............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_252182

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           406     1e-115
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCT	CAGTGGCTGGTA	TCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCTCAGTGGCTGGTATCCCTAC	ARPLSGWYPY	292	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	108	6	0	94.7
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	294	277	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_1491   4    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGAACCTTCAGC  93
V  94.2% (277/294)  IGHV1-69*01  1    ...G...................G........................................................C.........  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  A  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  I  P  M  F  G  T  A  N  Y 
                    Query_1491   94   AGTTATGCTATCACGTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGCATCATCCCTATGTTTGGAACAGCCAACTAC  183
V  94.2% (277/294)  IGHV1-69*01  91   ..C..........GC..........................................G.G...........C.....T.....A......  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  R  D  R  V  T  V  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  K  F  E  D 
                    Query_1491   184  GCACAGAAGTTCCGGGACAGAGTCACGGTTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAAATTTGAGGAC  273
V  94.2% (277/294)  IGHV1-69*01  181  .............A..G..........A...................................................G..C.......  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------CDR3-IMGT--------->                                  
                                       T  A  V  Y  Y  C  A  R  P  L  S  G  W  Y  P  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1491   274  ACGGCCGTCTATTACTGTGCGAGACCTCTCAGTGGCTGGTATCCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  355
V  94.2% (277/294)  IGHV1-69*01  271  ........G...............----------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                           
D  100.0% (12/12)   IGHD6-19*01  9    -----------------------------............-----------------------------------------  20
J  100.0% (38/38)   IGHJ4*02     11   --------------------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_252181

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         324     8e-91
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	N/A	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	GCCCCCACCGGGACAGGGGCT	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCCCCCACCGGGACAGGGGCTCAATTGGTTCGACCCC	ARPPPGQGLNWFDP	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  T  A  S  G  F  T  F  R  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1492     1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGGAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.9% (227/247)  IGHV3-30-3*01  47   ....................G......................T..............................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  L  A  V  I  F  F  D  G  S  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1492     91   AGTGGCTGGCAGTAATATTTTTTGACGGAAGCAAGAAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATTTCCAGAGACAATTCCA  180
V  91.9% (227/247)  IGHV3-30-3*01  137  .....G.......T....CA.A...T........T.....C..C.............................C................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                        K  N  I  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  P  P  P  G  Q  G  L  
                    Query_1492     181  AGAATATCTTGTATCTGGAAATGAACAGTCTGAGAGCTGAGGACACGGCTGTTTATTTCTGTGCGAGGCCCCCACCGGGACAGGGGCTCA  270
V  91.9% (227/247)  IGHV3-30-3*01  227  ....C.CGC........C..........C.......................G....A.........-----------------------  293
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  98.0% (49/50)    IGHJ5*02       2    ----------------------------------------------------------------------------------------..  3

                                        ------------->                                  
                                        N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1492     271  ATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  98.0% (49/50)    IGHJ5*02       4    .C..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_136993

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           420     7e-120
IGHD3-10*01                                                                                           23.8    0.013 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTAGAA	GGTTCGGGGAGT	CACGACTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTAGAAGGTTCGGGGAGTCACGACTCTTACTACTACGCTATGGACGTC	ARDPLEGSGSHDSYYYAMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  R  Y
                    Query_1493   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGGTA  90
V  96.2% (280/291)  IGHV1-46*01  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  I  I  N  P  S  G  G  T  T  K  Y  A  Q
                    Query_1493   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCAATAATCAATCCTAGTGGTGGTACCACAAAATACGCACA  180
V  96.2% (280/291)  IGHV1-46*01  96   ..................................................G.........C.............G.....GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  D  L  T  S  L  R  S  E  D  T  A
                    Query_1493   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGACCTGACCAGCCTGAGATCTGAGGACACGGC  270
V  96.2% (280/291)  IGHV1-46*01  186  ............................................................G....G........................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        I  Y  Y  C  A  R  D  P  L  E  G  S  G  S  H  D  S  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T
                    Query_1493   271  CATCTATTACTGTGCGAGAGATCCTTTAGAAGGTTCGGGGAGTCACGACTCTTACTACTACGCTATGGACGTCTGGGGCCAAGGGACCAC  360
V  96.2% (280/291)  IGHV1-46*01  276  .G.G.................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD3-10*01  11   -------------------------------............-----------------------------------------------  22
J  98.1% (53/54)    IGHJ6*02     9    ----------------------------------------------------..........G...........................  46

                                                      
                                        V  T  V  S  S 
                    Query_1493   361  GGTCACCGTCTCCTCA  376
J  98.1% (53/54)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_136992

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           332     3e-93
IGHD6-19*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGAGG	GTGGCTGGTAC	ATGGAGGATTTTTTGAAAT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGAGGGTGGCTGGTACATGGAGGATTTTTTGAAATC	ARDGGWLVHGGFFEI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1494   1    GGTCCCTGAGACTCTCCTGTGCGGCGTCTGGGTTCACCTTCAGTAGTTATGGCATAAGCTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-33*01  47   ......................A........A..............C........GCA................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  F  D  G  T  H  K  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1494   91   AGTGGGTGGCAATTATTTGGTTTGATGGAACTCATAAATACTATACAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCTA  180
V  92.4% (231/250)  IGHV3-33*01  137  ...........G....A....A........G.A...........G........................................T..C.  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  D  T  V  Y  M  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  G  W  L  V  H  
                    Query_1494   181  GGGACACGGTGTATATGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGATGGAGGGTGGCTGGTACATG  270
V  92.4% (231/250)  IGHV3-33*01  227  A.A.....C.....C.....................................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-19*01  11   ----------------------------------------------------------------------------...........---  21

                                      ---------------->                                  
                                      G  G  F  F  E  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_1494   271  GAGGATTTTTTGAAATCTGGGGCCAGGGAACCGTGGTCACCGTCTCCTCAG  321
J  97.1% (34/35)    IGHJ4*02     14   ----------------................C..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_136991

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-16*02                                                                                           12.2    32   
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGT	TCGTTA	CCCAATCTTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTTCGTTACCCAATCTTGGCTACTACTACGGTATGGACGTC	ARDRSLPNLGYYYGMDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  M  G  L  E 
                    Query_1495   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGATGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...............................G.........T...........................C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  Y  S  G  T  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_1495   91   TGGATTGGGCATATCTATTACAGTGGGACCACCAGTTACAATCCTTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAT  180
V  93.5% (229/245)  IGHV4-59*01  139  .........T..................G.....AC.....C..C...........................G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  S  L  P  N  L  G  Y 
                    Query_1495   181  CAGTTCTCCCTGAAGCTGAATTCCGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATCGTTCGTTACCCAATCTTGGCTAC  270
V  93.5% (229/245)  IGHV4-59*01  229  ...................GC..T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*02  28   ---------------------------------------------------------------------......---------------  33
J  96.4% (53/55)    IGHJ6*02     8    --------------------------------------------------------------------------------------....  11

                                      ----------------->                                 
                                       Y  Y  G  M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_1495   271  TACTACGGTATGGACGTCTGGGGCCAAGGGGCCACCGTCACCGTCTCCTCA  321
J  96.4% (53/55)    IGHJ6*02     12   ..............................A....G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_136990

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           327     9e-92
IGHD2-2*01                                                                                            18.0    0.62 
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAAGGGGGGGGA	ATTGCAGTAGTA	AACCCTGCC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAAGGGGGGGGAATTGCAGTAGTAAACCCTGCCACTTCTCCTACGGTCTGGACGTC	TRSRGGNCSSKPCHFSYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  R  V  G  Y  Y  W  N  W  V  R  Q  H  P  G  K  G 
                    Query_1496   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATCGTGTCGGTTACTACTGGAACTGGGTCCGCCAGCACCCCGGGAAGGGC  90
V  92.0% (229/249)  IGHV4-31*01  49   ........................................GCA...GT.............G....A.............A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  R  I  Y  Y  N  P  S  L  K  S  L  V  T  M  S  V  G  T  S 
                    Query_1496   91   CTGGAGTGGATTGGGTACATCTATTACGGTGGGAGGATCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATGTCAGTAGGCACGTCT  180
V  92.0% (229/249)  IGHV4-31*01  139  ...........................A.......C.C....................................A.......A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  V  N  S  V  S  P  A  D  T  A  V  Y  Y  C  T  R  S  R  G  G  N  C  S 
                    Query_1496   181  AAGAACCAGTTCTCCCTGAAGGTGAATTCTGTGAGTCCCGCGGACACGGCCGTCTATTACTGTACGAGATCAAGGGGGGGGAATTGCAGT  270
V  92.0% (229/249)  IGHV4-31*01  229  .....................C...GC.......C.G................G.........G.....---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD2-2*01   6    ----------------------------------------------------------------------------------....T...  13

                                      CDR3-IMGT-------------------------->                                 
                                       S  K  P  C  H  F  S  Y  G  L  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_1496   271  AGTAAACCCTGCCACTTCTCCTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  339
D  91.7% (11/12)    IGHD2-2*01   14   ....-----------------------------------------------------------------  17
J  92.9% (52/56)    IGHJ6*02     7    -------------...A..A.......A.............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_136997

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            396     2e-112
IGHD7-27*01                                                                                           10.3    123   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	AGAGGGC	CTGGG	TTGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGAAGAGGGCCTGGGTTGGTTGACTAC	AHRRGPGLVDY	263	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	27	3	0	90
FR2-IMGT	77	127	51	49	2	0	96.1
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	112	2	0	98.2
CDR3-IMGT (germline)	263	271	9	9	0	0	100
Total	N/A	N/A	271	262	9	0	96.7


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  T  T  G  G  V  A  V  A  W  I  R
                    Query_1497   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCACCACTGGTGGAGTGGCTGTGGCCTGGATCCG  90
V  96.7% (262/271)  IGHV2-5*01   30   ...........................................................G....A.........G.....G.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  D  W  L  A  L  I  D  G  N  D  D  K  R  F  S  P  S  L  K  S  R  L  T
                    Query_1497   91   TCAGCCCCCAGGAAAGGCCCTGGACTGGCTTGCACTCATTGATGGGAATGATGATAAGCGCTTCAGCCCATCTCTGAAGAGCAGGCTCAC  180
V  96.7% (262/271)  IGHV2-5*01   120  ........................G...............T..T..................A...........................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  H  C  A  H  R
                    Query_1497   181  CATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATCACTGTGCACACAG  270
V  96.7% (262/271)  IGHV2-5*01   210  ............................................................................T.............  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  R

                                      ----CDR3-IMGT----------->                                  
                                        R  G  P  G  L  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1497   271  AAGAGGGCCTGGGTTGGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  329
V  96.7% (262/271)  IGHV2-5*01   300  .----------------------------------------------------------  300
                                                                                                 
D  100.0% (5/5)     IGHD7-27*01  5    --------.....----------------------------------------------  9
J  100.0% (42/42)   IGHJ4*02     7    -----------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_136996

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*04                                                                                         399     3e-113
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*04	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCCACGAGAGATAT	GGGGAGTT	CTC	TGATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCACGAGAGATATGGGGAGTTCTCTGATTAC	ARLHERYGEFSDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  Q  A  S  G  F  T  F  T  T  Y
                    Query_1498     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTCAGGCCTCTGGATTCACCTTTACCACCTA  90
V  94.1% (272/289)  IGHV5-10-1*04  6    .............................................................A...GT.......A..G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          F  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_1498     91   CTTCATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATCGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  94.1% (272/289)  IGHV5-10-1*04  96   ..GG.....................................................T................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  Q  V  T  L  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  R  L  K  A  S  D  S  A
                    Query_1498     181  GTCCTTCCAAGGACAGGTCACCCTCTCTGTTGACAAGTCCATCAGTACTGCCTACCTGCAGTGGAGCAGGCTGAAGGCCTCGGACTCCGC  270
V  94.1% (272/289)  IGHV5-10-1*04  186  ............C.........A....A.C...............C.......................C...............A....  275
                                          S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          M  Y  Y  C  A  R  L  H  E  R  Y  G  E  F  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1498     271  CATGTACTACTGTGCGAGACTCCACGAGAGATATGGGGAGTTCTCTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  94.1% (272/289)  IGHV5-10-1*04  276  ......T............-------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD3-10*01    16   ----------------------------------........--------------------------------------------  23
J  97.6% (40/41)    IGHJ4*02       8    ---------------------------------------------...C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_136994

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           313     1e-87
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTGGTTTG	CGGAGAGCTATTAT	TC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTGGTTTGCGGAGAGCTATTATTCTGACTAC	ARDWFAESYYSDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  P  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1499   1    GGTCCCTAAGACTCTCCTGTGTTGCCTCTGGATTTCCCTTCAGTGACTACAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-21*01  47   .......G.............CA...........CA........AG...T........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  G  T  S  S  F  K  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1499   91   AGTGGGTCTCATATATTAGTGGCACTAGTAGTTTCAAATCTTACGCAGACTCTGTTAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.0% (225/250)  IGHV3-21*01  137  ............CC......A.T.G........A..T..AC...........A..G..................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  Y  T  V  Y  L  Q  M  N  S  L  R  A  A  D  T  A  V  Y  Y  C  A  R  D  W  F  A  E  S  Y  
                    Query_1499   181  AGTACACGGTGTATCTGCAGATGAACAGCCTGAGAGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGATTGGTTTGCGGAGAGCTATT  270
V  90.0% (225/250)  IGHV3-21*01  227  ..A..T.AC..........A...................A..............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  85.7% (12/14)    IGHD3-10*01  15   ------------------------------------------------------------------------------...G...T....  26

                                      ---------->                                  
                                      Y  S  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_1499   271  ATTCTGACTACTGGGGCCAGGGAATCTTGGTCACTGTCTCCTCAG  315
D  85.7% (12/14)    IGHD3-10*01  27   ..-------------------------------------------  28
J  92.7% (38/41)    IGHJ4*02     8    ----....................C.C.......C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_136999

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTAATGGGAGAC	CAGTGGCTG	AGACGTCCACACTTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTAATGGGAGACCAGTGGCTGAGACGTCCACACTTCCTTGACTCC	ARDVMGDQWLRRPHFLDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1500   1    GGTCCCTGAGACTCTCCTGTTCAGCGTCTGGATTTACCTTTAGTCGCTATGGCATGCACTGGGTCCGCCAGGCTCCGGGCAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-33*01  47   ....................G.............C.....C...A...............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  Y  D  G  S  D  E  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1500   91   AGTGGCTGGCAGTTATTTCGTATGATGGAAGTGATGAAAACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  90.8% (227/250)  IGHV3-33*01  137  .....G..........A.G.............A..A..T...................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  H  T  I  D  L  Q  M  N  S  L  R  V  E  D  T  A  I  Y  Y  R  A  R  D  V  M  G  D  Q  W  
                    Query_1500   181  GGCACACGATTGACCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTATTTATTATCGTGCGAGAGATGTAATGGGAGACCAGTGGC  270
V  90.8% (227/250)  IGHV3-33*01  227  A.A.....C.GT.T......................C...G.........G.G.....CT..........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-19*01  9    -----------------------------------------------------------------------------------.......  15

                                      IMGT--------------------->                                
                                      L  R  R  P  H  F  L  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1500   271  TGAGACGTCCACACTTCCTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  328
D  100.0% (9/9)     IGHD6-19*01  16   ..--------------------------------------------------------  17
J  97.5% (39/40)    IGHJ4*02     7    ------------------......A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_136998

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           227     8e-62
IGHD3-16*02                                                                                           16.1    2.1  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	TATGCCGAAG	GTTATCGT	GGAC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGATATGCCGAAGGTTATCGTGGACTTGACTAC	VRYAEGYRGLDY	230	265	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	20	4	0	83.3
FR2-IMGT	41	91	51	47	4	0	92.2
CDR2-IMGT	92	115	24	14	10	0	58.3
FR3-IMGT	116	229	114	94	20	0	82.5
CDR3-IMGT (germline)	230	235	6	5	1	0	83.3
Total	N/A	N/A	223	184	39	0	82.5


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  L  S  Q  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  Q  W  V  A  E  I  W  Y  D
                    Query_1501   13   GTCTGGATTCACCCTCAGTCAGTATGGCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGCAGTGGGTGGCAGAGATTTGGTACGA  102
V  82.5% (184/223)  IGHV3-33*01  72   .............T.....AGC........G.................................G............TT..A.....T..  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  E  V  K  Y  Y  A  D  V  V  R  G  R  F  T  L  S  R  D  I  S  K  S  T  V  H  L  E  M  N
                    Query_1501   103  CGGCGAAGTTAAGTATTATGCAGATGTCGTGAGGGGCCGATTCACCCTCTCCAGAGACATTTCCAAGAGCACGGTTCATCTGGAAATGAA  192
V  82.5% (184/223)  IGHV3-33*01  162  T..AAGTAA...A..C........CTC.....A.............A............A........A....C.GT.....C.......  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-------------CDR3-IMGT------------>                 
                                        S  L  R  D  D  D  A  G  V  Y  F  C  V  R  Y  A  E  G  Y  R  G  L  D  Y  W  G  Q  G  A  L
                    Query_1501   193  TAGTCTGAGAGACGACGACGCGGGTGTTTATTTCTGTGTGAGATATGCCGAAGGTTATCGTGGACTTGACTACTGGGGCCAGGGAGCCCT  282
V  82.5% (184/223)  IGHV3-33*01  252  C..C.......C...G...A...C...G....A.....C....-----------------------------------------------  294
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (8/8)     IGHD3-16*02  24   -----------------------------------------------------........-----------------------------  31
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------------------------------------....................A....  31

                                                       
                                        V  T  V  S  S  
                    Query_1501   283  GGTCACCGTCTCTTCAG  299
J  95.2% (40/42)    IGHJ4*02     32   ............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_269556

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           335     4e-94
IGHD1-20*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGATTTGGCA	ATAACTGG	GCCCACTCGAGAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGATTTGGCAATAACTGGGCCCACTCGAGAGTACTATGGTTTGGACGTC	ARDDLAITGPTREYYGLDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_1502   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGGCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-11*01  47   ...................................................................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  M  S  S  S  G  S  I  I  K  Y  A  D  S  V  E  G  R  F  V  M  S  R  D  N  A  
                    Query_1502   91   AGTGGGTCTCACACATGAGTAGTAGTGGTAGTATCATAAAGTATGCAGACTCTGTGGAGGGCCGATTCGTCATGTCCAGGGACAACGCCG  180
V  92.8% (232/250)  IGHV3-11*01  137  .......T...T....T................C....T.C..C............A...........AC...C...............A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      E  N  S  L  Y  L  Q  M  T  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  D  L  A  I  T  G  
                    Query_1502   181  AAAACTCACTGTATCTGCAAATGACCAGTCTAAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAGAGACGATTTGGCAATAACTGGGC  270
V  92.8% (232/250)  IGHV3-11*01  227  .G......................A...C..G....................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-20*01  4    --------------------------------------------------------------------------------........--  11

                                      -IMGT----------------------->                                 
                                      P  T  R  E  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1502   271  CCACTCGAGAGTACTATGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  96.1% (49/51)    IGHJ6*02     12   -----------.....C...A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_269557

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           349     3e-98
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTCTGTG	AGCAGTGCCTGGT	CGTTTGGTCCCCCCCCACGACTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCTGTGAGCAGTGCCTGGTCGTTTGGTCCCCCCCCACGACTCTACTACCTCGACTGC	ARHSVSSAWSFGPPPRLYYLDC	250	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	135	27	21	0	6	77.8
FR3-IMGT	136	249	114	107	7	0	93.9
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	242	9	6	94.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  H  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_1503   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGCAGTTACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.2% (242/257)  IGHV4-39*01  49   ...............................................T......T...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  N  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D 
                    Query_1503   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCAACACCAACTACAACCCGTCCCTCAAGAGTCGAGTAACCATGTCCGTAGAC  180
V  94.2% (242/257)  IGHV4-39*01  139  ...................................------....T............................C.....A.........  222
                                       L  E  W  I  G  S  I  Y  Y  S  G  S        T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------------
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  A  A  T  Y  Y  C  A  R  H  S  V  S  S 
                    Query_1503   181  ACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGAGCGCCGCAGACGCGGCTACGTATTACTGTGCGAGACATTCTGTGAGCAGT  270
V  94.2% (242/257)  IGHV4-39*01  223  ........................................C..........A.....GT..................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  92.3% (12/13)    IGHD6-19*01  7    ------------------------------------------------------------------------------------......  12

                                      --------CDR3-IMGT--------------------------->                                  
                                       A  W  S  F  G  P  P  P  R  L  Y  Y  L  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1503   271  GCCTGGTCGTTTGGTCCCCCCCCACGACTCTACTACCTCGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  349
D  92.3% (12/13)    IGHD6-19*01  13   .G.....------------------------------------------------------------------------  19
J  93.8% (45/48)    IGHJ4*02     1    -------------------------------.....T.T....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_269554

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           383     1e-108
IGHD1-7*01                                                                                            12.2    36    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GGGGGTGGGG	GGAACT	CGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGGGGGTGGGGGGAACTCGGGGACTACTTTGACTAC	ARGGWGELGDYFDY	287	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	24	0	0	100
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	172	21	16	5	0	76.2
FR3-IMGT	173	286	114	103	11	0	90.4
CDR3-IMGT (germline)	287	293	7	6	1	0	85.7
Total	N/A	N/A	291	268	23	0	92.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  
                    Query_1504   3    AGATGCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTA  92
V  92.1% (268/291)  IGHV3-53*01  2    ..G...........G...........................................................................  91
                                         V  Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  

                                      T------><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------
                                      S  N  Y  M  S  W  V  R  Q  A  P  G  K  R  L  E  W  V  S  S  I  F  S  N  G  N  T  Y  Y  T  
                    Query_1504   93   GCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGAGGCTGGAGTGGGTCTCAAGCATTTTTAGTAATGGTAACACATACTACACAG  182
V  92.1% (268/291)  IGHV3-53*01  92   ......................................G.................GTT....A...CGG.....G..........G...  181
                                      S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  V  Y  L  Q  V  H  S  R  G  A  G  D  P  
                    Query_1504   183  ACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGGTGTATCTTCAGGTGCACAGCCGGGGGGCCGGGGACCCGG  272
V  92.1% (268/291)  IGHV3-53*01  182  ..................................................C..........AA..A......T.A.A....A....A...  271
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                  
                                      A  V  F  Y  C  A  R  G  G  W  G  E  L  G  D  Y  F  D  Y  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_1504   273  CCGTGTTTTACTGTGCAAGAGGGGGGTGGGGGGAACTCGGGGACTACTTTGACTACTGGGGCCAGGGATCCCTGGTCATCGTCTCCTCAG  362
V  92.1% (268/291)  IGHV3-53*01  272  ......A.........G....---------------------------------------------------------------------  292
                                      A  V  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD1-7*01   10   -------------------------------......-----------------------------------------------------  15
J  95.8% (46/48)    IGHJ4*02     1    ------------------------------------------..........................A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_269555

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           336     1e-94
IGHD1-26*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGG	ATAGTGGGAGCTACTAC	GG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGGATAGTGGGAGCTACTACGGACTTTGACTAC	ASRIVGATTDFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  Y  Y  M  S  W  I  R  Q  S  P  G  K  G  L  
                    Query_1505   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAAATACTACATGAGCTGGATTCGCCAGAGTCCAGGGAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-11*06  47   ............................................G.C.................C......GC.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  C  I  S  G  S  S  S  F  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1505   91   AGTGGCTTTCATGCATCAGTGGTAGTAGCAGTTTCACAGACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.5% (231/247)  IGHV3-11*06  137  .....G......A...T...A.......T....A....A...................................................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  H  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  R  I  V  G  A  T  T  
                    Query_1505   181  AGAACTCATTATATCTGCACATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTACTACTGTGCGAGCCGGATAGTGGGAGCTACTACGG  270
V  93.5% (231/247)  IGHV3-11*06  227  ........C.G........A...................................T...........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (17/17)   IGHD1-26*01  4    -----------------------------------------------------------------------.................--  20

                                      ---------->                                  
                                      D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1505   271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (45/45)   IGHJ4*02     4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_269552

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD2-2*02                                                                                            23.8    0.011
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGATC	ATTGTAGTGGTTTCAGATGCTATA	ATACAGG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGATCATTGTAGTGGTTTCAGATGCTATAATACAGGCAACTGGTTCGACCCC	AREDHCSGFRCYNTGNWFDP	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  E  W  T  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_1506   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCAGTAATTACGAGTGGACCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   .............................T.............G....T.C....G....A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_1506   91   TGGATTGGCTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGGGTCACCATTTCACTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G...A..T...........................................A........A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       L  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  D  H  C  S  G  F  R  C 
                    Query_1506   181  CTGTTCTCCCTGAAGCTAAACTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGAGGATCATTGTAGTGGTTTCAGATGC  270
V  93.5% (229/245)  IGHV4-59*01  229  .A...............G.G...........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (20/24)    IGHD2-2*02   6    ----------------------------------------------------------------------........A..AC...C...  25

                                      GT------------------------>                                  
                                       Y  N  T  G  N  W  F  D  P  W   A  R  E  P  *  S  P  S  P  Q 
                    Query_1506   271  TATAATACAGGCAACTGGTTCGACCCCTGGG-CCAGGGAACCCTAGTCACCGTCTCCTCAG  330
D  83.3% (20/24)    IGHD2-2*02   26   ....---------------------------------------------------------  29
J  96.0% (48/50)    IGHJ5*02     2    -----------....................G............G................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_269553

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           349     2e-98
IGHD2-21*02                                                                                           18.0    0.61 
IGHJ1*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTCACAGTATTGTGGCGC	TGGCGACTGCTA	CGCCTCC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCACAGTATTGTGGCGCTGGCGACTGCTACGCCTCCGCTGAGTACTTCCAGCAC	ARHSQYCGAGDCYASAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1507   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*08  49   .............................................T..........C.................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_1507   91   TGGATTGGGTATATCTATTCCAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGTTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*08  139  ...................A...............C...................................AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       H  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  S  Q  Y  C  G  A  G  D 
                    Query_1507   181  CACTTCTCCCTGACCCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATTCACAGTATTGTGGCGCTGGCGAC  270
V  95.5% (234/245)  IGHV4-59*08  229  ..G..........AG....G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD2-21*02  13   -----------------------------------------------------------------------------------...T...  19

                                      MGT-------------------------->                                  
                                       C  Y  A  S  A  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1507   271  TGCTACGCCTCCGCTGAGTACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  334
D  91.7% (11/12)    IGHD2-21*02  20   .....-----------------------------------------------------------  24
J  96.2% (50/52)    IGHJ1*01     1    ------------.....A.........................................C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_269550

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_1508   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  F  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_1508   91   GAGTGGATTGGGGAAATCTTTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ...................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_1508   181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1508   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_269551

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           332     3e-93
IGHD2-21*02                                                                                           14.1    8.0  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTTCA	GGTGACT	CTG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTTCAGGTGACTCTGGACTAC	AKDLQVTLDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1509   1    GGTCCCTGAGACTCTCCTGTGCAGCATCTGGATTCACCTTCAGTAGTTATGCCATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-30*04  47   .........................C....................C.....T..........................C..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  E  K  Y  H  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_1509   91   AATGGGTGGCAGTTATATCATATGATGGAAGTGAGAAATATCACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  92.4% (231/250)  IGHV3-30*04  137  .G..............................A.T.....CT...............A...........................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  G  G  D  T  A  I  Y  Y  C  A  K  D  L  Q  V  T  L  D  
                    Query_1509   181  AGAACACGCTGTACTTGCAAATGAACAGCCTTAGAGGTGGGGACACGGCTATATATTACTGTGCGAAAGATCTTCAGGTGACTCTGGACT  270
V  92.4% (231/250)  IGHV3-30*04  227  .............TC................G....C..A..........G.G.............G...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-21*02  14   ----------------------------------------------------------------------------.......-------  20
J  97.5% (39/40)    IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                  
                                      Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_1509   271  ACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  306
J  97.5% (39/40)    IGHJ4*02     13   ..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_269558

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           344     6e-97
IGHD2-15*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGG	GGATATTGTAGTGGTG	CTCCCTGCTCCCCGAGCC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATGGGGGATATTGTAGTGGTGCTCCCTGCTCCCCGAGCCACTTCGACTAC	VKDGGYCSGAPCSPSHFDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  A  F  S  G  S  A  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_1510   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCGCCTTCAGTGGAAGTGCTATGTACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  94.0% (235/250)  IGHV3-64*05  47   ...................................A........A.CTA.......C.................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  V  S  A  V  S  G  D  G  G  G  T  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1510   91   AATGTGTTTCAGCTGTTAGTGGTGATGGGGGTGGCACAAAGTACGCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-64*05  137  ...A..........A.....A..A........A.....T.C.................................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  F  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K  D  G  G  Y  C  S  G  
                    Query_1510   181  AGAACACGCTGTTTCTTCAAATGAGCAGTCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGTGAAAGATGGGGGATATTGTAGTGGTG  270
V  94.0% (235/250)  IGHV3-64*05  227  ............A.G.......................................................--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (16/16)   IGHD2-15*01  2    --------------------------------------------------------------------------................  17

                                      -IMGT----------------------->                                  
                                      A  P  C  S  P  S  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1510   271  CTCCCTGCTCCCCGAGCCACTTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
J  97.8% (44/45)    IGHJ4*02     4    ------------------....T........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_325081

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           10.3    132   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_1511   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  95.2% (276/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  F  A  Q 
                    Query_1511   92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTTTGCACAG  181
V  95.2% (276/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_1511   182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_1511   272  ATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  95.2% (276/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_325080

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           378     3e-107
IGHD3-10*01                                                                                           12.2    35    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCCAGC	GGGAGT	GAAAAGTTAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGCAGATCCAGCGGGAGTGAAAAGTTAATTGACTCT	GRSSGSEKLIDS	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	4	2	0	66.7
Total	N/A	N/A	288	265	23	0	92


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  E  A  S  G  Y  T  F  S  N  Y 
                    Query_1512   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAAGTCTCCTGCGAGGCTTCTGGTTACACCTTTAGCAACTAC  91
V  92.0% (265/288)  IGHV1-18*04  7    ..................................................G.........A.....................C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       E  I  G  W  V  R  Q  A  R  G  Q  G  L  E  W  M  G  C  I  S  G  Y  S  G  D  T  E  Y  A  Y 
                    Query_1512   92   GAAATCGGCTGGGTGCGACAGGCCCGTGGACAAGGGCTTGAGTGGATGGGATGCATCAGCGGTTACAGTGGTGACACAGAGTATGCATAC  181
V  92.0% (265/288)  IGHV1-18*04  97   .GT...A..................C...........................G.......C.....A....A.....A.C......C.G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       Q  F  R  G  R  V  T  M  T  T  D  T  S  A  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_1512   182  CAATTCCGGGGCAGAGTCACCATGACCACAGACACATCCGCGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.0% (265/288)  IGHV1-18*04  187  A.GC...A...............................A..................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  G  R  S  S  G  S  E  K  L  I  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1512   272  GTGTATTACTGTGGCAGATCCAGCGGGAGTGAAAAGTTAATTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.0% (265/288)  IGHV1-18*04  277  .............CG...----------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD3-10*01  17   ------------------------......----------------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    ----------------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_327420

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_1513   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_1513   91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_1513   181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_1513   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_174397

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           371     7e-105
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGAGGGCAGTC	GGATATTGTAGTGTTACTAACTGCT	TCTGGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGAGGGCAGTCGGATATTGTAGTGTTACTAACTGCTTCTGGTACTACTTTGACTAC	ARGRAVGYCSVTNCFWYYFDY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	242	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1514   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (242/247)  IGHV3-21*01  47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1514   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTACTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.0% (242/247)  IGHV3-21*01  137  ..............................G...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  S  L  Y  L  K  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R  G  R  A  V  G  Y  C  
                    Query_1514   181  AGAACTCACTGTATCTGAAAATGAACAGCCTGAGAGCCGGGGACACGGCTGTATATTACTGTGCGAGGGGGAGGGCAGTCGGATATTGTA  270
V  98.0% (242/247)  IGHV3-21*01  227  .................C.....................A............G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  84.0% (21/25)    IGHD2-2*01   2    --------------------------------------------------------------------------------..........  11

                                      DR3-IMGT-------------------------->                                  
                                      S  V  T  N  C  F  W  Y  Y  F  D  Y  W  G  Q  G  T  L  A  P  V  S  S  
                    Query_1514   271  GTGTTACTAACTGCTTCTGGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGCCCCCGTCTCCTCAG  339
D  84.0% (21/25)    IGHD2-2*01   12   ..AG...C.G.....------------------------------------------------------  26
J  95.8% (46/48)    IGHJ4*02     1    ---------------------.................................T.A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_174396

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTTTGTGG	TACTCTGGTTCGGGGAGT	AATACCCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTTGTGGTACTCTGGTTCGGGGAGTAATACCCGTTTTGACTAC	ARALWYSGSGSNTRFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_1515   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ...............................G.............................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  T  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1515   91   CTGGAGTGGATTGGATACATCTATTACAGTGGGAGCACCTACTACACCCCGTCCCTCAAGAGTCGAGTTACCATTTCAGTCGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ..............G...............................A...........................A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  L  W  Y  S  G  S 
                    Query_1515   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTTTGTGGTACTCTGGTTCG  270
V  97.6% (244/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  5    ------------------------------------------------------------------------------....A.......  16

                                      MGT-------------------->                                  
                                       G  S  N  T  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1515   271  GGGAGTAATACCCGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  94.4% (17/18)    IGHD3-10*01  17   ......----------------------------------------------------  22
J  100.0% (43/43)   IGHJ4*02     6    ---------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_174395

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           327     9e-92
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCGCCGGGACG	GTGGTAATTAC	CCTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCGCCGGGACGGTGGTAATTACCCTATTGACTAC	ARPRRDGGNYPIDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  T  D  G  Y  Y  W  S  W  I  R  Q  F  P  G  K  G 
                    Query_1516   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGAACTGATGGTTACTACTGGAGCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  92.0% (229/249)  IGHV4-31*03  49   .........................................C.G..G............................CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  Y  H  A  G  S  T  Y  Y  T  P  S  V  R  G  R  V  T  M  S  V  D  T  S 
                    Query_1516   91   CTGGAGTGGATTGGGTTCATCTATCACGCTGGGAGCACCTACTACACCCCGTCCGTCCGGGGTCGAGTCACCATGTCAGTGGACACGTCT  180
V  92.0% (229/249)  IGHV4-31*03  139  ................A.......T..AG.................A.......C..AA.A.......T.....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  R  R  D  G  G  N 
                    Query_1516   181  AAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGACCTCGCCGGGACGGTGGTAAT  270
V  92.0% (229/249)  IGHV4-31*03  229  ...................A.....G...........................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD3-22*01  18   ----------------------------------------------------------------------------------.....T..  25

                                      -------------->                                  
                                       Y  P  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1516   271  TACCCTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
D  90.9% (10/11)    IGHD3-22*01  26   ...----------------------------------------------  28
J  100.0% (42/42)   IGHJ4*02     7    -------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_174394

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           449     3e-128
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAGGAAAGTGGATTCAC	GATAGTAGTGGTTAT	CAAA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGAAAGTGGATTCACGATAGTAGTGGTTATCAAAACTACGGTATGGACGTC	ARLGKWIHDSSGYQNYGMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	288	1	0	99.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_1517   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTA  90
V  99.7% (288/289)  IGHV5-51*03  6    ......................................................................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_1517   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  99.7% (288/289)  IGHV5-51*03  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1517   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  99.7% (288/289)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  Y  C  A  R  L  G  K  W  I  H  D  S  S  G  Y  Q  N  Y  G  M  D  V  W  G  Q  G  T  T
                    Query_1517   271  CATGTATTACTGTGCGAGACTAGGAAAGTGGATTCACGATAGTAGTGGTTATCAAAACTACGGTATGGACGTCTGGGGCCAAGGGACCAC  360
V  99.7% (288/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (15/15)   IGHD3-22*01  11   -------------------------------------...............--------------------------------------  25
J  100.0% (50/50)   IGHJ6*02     13   --------------------------------------------------------..................................  46

                                                      
                                        V  T  V  S  S 
                    Query_1517   361  GGTCACCGTCTCCTCA  376
J  100.0% (50/50)   IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_174393

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	247	223	21	3	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_1518   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  87
V  90.3% (223/247)  IGHV4-4*02   49   ..................GC.........T...TCC......A..AG........GG.......................G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  K 
                    Query_1518   88   GAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCAAG  177
V  90.3% (223/247)  IGHV4-4*02   139  .......................T......A................................G.......A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G  W 
                    Query_1518   178  AATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGTGGGTAGCAGTGGCTGG  267
V  90.3% (223/247)  IGHV4-4*02   229  ..CC.GT..........G....GC..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-19*01  6    -----------------------------------------------------------------------------.............  18

                                      -------->                                
                                       L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_1518   268  CTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  308
J  95.0% (38/40)    IGHJ4*02     7    -......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_174392

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           353     9e-100
IGHD3-10*01                                                                                           19.9    0.15  
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	GCTGGATTGGGCTTATGC	GTTCGGGCAGTTA	AGGGG	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCTGGATTGGGCTTATGCGTTCGGGCAGTTAAGGGGCGACCCC	ALDWAYAFGQLRGDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	235	9	0	96.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1519   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAATTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.3% (235/244)  IGHV3-74*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  G  I  K  S  D  G  S  D  T  R  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  A  
                    Query_1519   91   TGTGGGTCTCAGGTATTAAAAGTGATGGGAGTGACACAAGGTACGCGGACTCCGTGAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  96.3% (235/244)  IGHV3-74*01  137  ...........C.......T............AG......C........................T........................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  L  D  W  A  Y  A  F  G  
                    Query_1519   181  AGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGCTGGATTGGGCTTATGCGTTCGGGC  270
V  96.3% (235/244)  IGHV3-74*01  227  ....................................................G...........--------------------------  290
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.3% (12/13)    IGHD3-10*01  12   ----------------------------------------------------------------------------------.......G  19

                                      ---------------->                                  
                                      Q  L  R  G  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1519   271  AGTTAAGGGGCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  92.3% (12/13)    IGHD3-10*01  20   .....----------------------------------------------  24
J  100.0% (41/41)   IGHJ5*02     11   ----------.........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_2768

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD6-19*01                                                                                           16.1    2.4  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CTCTGTGAC	CAGTGCCTGGT	CGTTTGGTCCCCCCCCACGACTCT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACTCTGTGACCAGTGCCTGGTCGTTTGGTCCCCCCCCACGACTCTACTTCTTTGACTCC	ARHSVTSAWSFGPPPRLYFFDS	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	27	25	25	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <-------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT------
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  T  T  Y  H  W  G  W  I  R  Q  P  P  G  K  G  L
                    Query_1520   3    CCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTACTACTTACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGACT  92
V  95.2% (237/249)  IGHV4-39*01  51   ............................................G..G....T..................................G..  140
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L

                                      ---------------><-----CDR2-IMGT-----><----------------------------------------------------
                                        E  W  I  G  S  I  S  Y  S  G  S  T  D  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K
                    Query_1520   93   GGAGTGGATTGGGAGTATCTCTTATAGTGGGAGCACCGACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCCGTGGACACGTCCAA  182
V  95.2% (237/249)  IGHV4-39*01  141  ....................A................T..................A.....................A...........  230
                                        E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K

                                      FR3-IMGT----------------------------------------------------><----------------------------
                                        N  Q  F  S  L  K  L  S  S  V  T  A  P  D  T  A  V  Y  Y  C  A  R  H  S  V  T  S  A  W  S
                    Query_1520   183  GAATCAATTCTCCCTGAAGCTGAGCTCTGTGACCGCCCCAGACACGGCTGTATATTACTGTGCGAGACACTCTGTGACCAGTGCCTGGTC  272
V  95.2% (237/249)  IGHV4-39*01  231  ...C..G..............................G.............G.................---------------------  299
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                        
D  90.9% (10/11)    IGHD6-19*01  9    ------------------------------------------------------------------------------.....G.....-  19

                                      CDR3-IMGT--------------------------->                                  
                                        F  G  P  P  P  R  L  Y  F  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1520   273  GTTTGGTCCCCCCCCACGACTCTACTTCTTTGACTCCTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  343
J  93.8% (45/48)    IGHJ4*02     1    -----------------------...A........A..................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_2769

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1521   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_1521   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_1521   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_1521   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_2766

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           386     1e-109
IGHD6-19*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CCGCGGA	GGGTATAGCAGTGGCTGGTAC	GGTCCGTCCCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACCGCGGAGGGTATAGCAGTGGCTGGTACGGTCCGTCCCTCTTTGACTAC	ARHRGGYSSGWYGPSLFDY	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	249	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_1522   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  99.2% (249/251)  IGHV4-39*01  49   ....................................A.....................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1522   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  99.2% (249/251)  IGHV4-39*01  139  ..........................................................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  R  G  G  Y  S  S 
                    Query_1522   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACACCGCGGAGGGTATAGCAGT  270
V  99.2% (249/251)  IGHV4-39*01  229  .....................................................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (21/21)   IGHD6-19*01  1    ------------------------------------------------------------------------------............  12

                                      3-IMGT----------------------->                                  
                                       G  W  Y  G  P  S  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1522   271  GGCTGGTACGGTCCGTCCCTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  100.0% (21/21)   IGHD6-19*01  13   .........-------------------------------------------------------  21
J  100.0% (44/44)   IGHJ4*02     5    --------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_2767

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD3-3*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TCGTCAAGATCGCAGTCTTTATCGCTACCTCA	GAGTGGTT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATCGTCAAGATCGCAGTCTTTATCGCTACCTCAGAGTGGTTTTTGACCTC	AKDRQDRSLYRYLRVVFDL	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  S  Y  V  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1523   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAGCAGCTATGTCATGAGCTGGGTTCGGCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-23*01  47   .....................C.............................C............C..C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  S  E  S  G  V  S  T  Y  I  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1523   91   AGTGGGTCGCAGCTATTAGCGAAAGTGGCGTCAGTACATATATCGCGGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  90.4% (226/250)  IGHV3-23*01  137  ........T..........T.GT.....T.GT..C.....CTA...A...........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      N  N  T  I  Y  L  Q  M  S  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  R  Q  D  R  S  L  
                    Query_1523   181  ACAACACGATATATCTGCAAATGTCCAGCCTGAGAGCCGAGGACACGGCCCTTTATTACTGTGCGAAGGATCGTCAAGATCGCAGTCTTT  270
V  90.4% (226/250)  IGHV3-23*01  227  .G......C.G............AA.........................G.A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Y  R  Y  L  R  V  V  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1523   271  ATCGCTACCTCAGAGTGGTTTTTGACCTCTGGGGCCAGGGAACCCTGGTCACAGTCTCCTCAG  333
D  100.0% (8/8)     IGHD3-3*01   16   ------------........-------------------------------------------  23
J  93.0% (40/43)    IGHJ4*02     6    --------------------......TA........................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_2764

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           291     6e-81
IGHD3-10*01                                                                                           25.7    0.003
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCACTTCGGCCC	ATGGTTCGGGGAG	CAGGGGTT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCACTTCGGCCCATGGTTCGGGGAGCAGGGGTTTTTTGATGTC	AKDHFGPWFGEQGFFDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  A  S  Y  D  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_1524   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTGCCAGCTATGACATGAACTGGGTCCGCCAGGCGCCAGGGAGGGGGCTGG  90
V  87.2% (218/250)  IGHV3-23*01  47   ....................................C....AG........C.....G...............T.......A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  A  R  G  G  T  K  S  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  S  
                    Query_1524   91   AGTGGGTCTCCGGTATTAGTGCTAGAGGTGGAACGAAATCATATGCGGACTCTGTGACGGGCCGCTTCACCATCTCCAGAGACAACTCCA  180
V  87.2% (218/250)  IGHV3-23*01  137  ..........A.C........G...T.....T.GC.C..AC..C..A.....C....A......G....................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  E  V  Y  L  Q  M  N  S  L  R  H  E  D  T  A  V  Y  Y  C  A  K  D  H  F  G  P  W  F  
                    Query_1524   181  AGAATGAGGTGTACTTGCAAATGAACAGCCTGAGACACGAAGACACGGCCGTATATTACTGTGCGAAAGACCACTTCGGCCCATGGTTCG  270
V  87.2% (218/250)  IGHV3-23*01  227  ....CAC.C....TC....................GC...G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (13/13)   IGHD3-10*01  9    ----------------------------------------------------------------------------------........  16

                                      GT-------------------->                                  
                                      G  E  Q  G  F  F  D  V  W  G  Q  G  T  K  V  I  V  S  S  
                    Query_1524   271  GGGAGCAGGGGTTTTTTGATGTCTGGGGCCAAGGGACAAAGGTCATCGTCTCTTCAG  327
D  100.0% (13/13)   IGHD3-10*01  17   .....----------------------------------------------------  21
J  95.5% (42/44)    IGHJ3*01     7    -------------..........................T.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_2765

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           425     3e-121
IGHD3-22*01                                                                                           23.8    0.012 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	281	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F
                    Query_1525   1    GCAGCTGGTGCAGTCTGGAGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTT  90
V  96.9% (281/290)  IGHV3-33*01  6    ..........G.......G..................................................................AG..A  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D
                    Query_1525   91   TGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGA  180
V  96.9% (281/290)  IGHV3-33*01  96   ..........................................................................................  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A
                    Query_1525   181  CTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGC  270
V  96.9% (281/290)  IGHV3-33*01  186  .....................................T...........C.......................A................  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T
                    Query_1525   271  TGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCAC  360
V  96.9% (281/290)  IGHV3-33*01  276  ...G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  88.9% (16/18)    IGHD3-22*01  5    -------------------------------..........G..G....-----------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ---------------------------------------------------....G............................GG....  39

                                                 
                                        V  S  S  
                    Query_1525   361  CGTCTCTTCAG  371
J  94.0% (47/50)    IGHJ3*02     40   ...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_2762

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     1e-95
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1526   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_1526   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  S  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_1526   181  CAGTTCTCCGTGAGCCTGAGATCTGCGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  94.3% (231/245)  IGHV4-59*01  229  .........C...AG.....C....T.....................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_1526   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_2763

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD3-16*01                                                                                           43.0    2e-08 
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCTAGTCTGGAA	TATGATTACGTTTGGGGGAGTT	CTCACCTCAC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCTAGTCTGGAATATGATTACGTTTGGGGGAGTTCTCACCTCACCTGGTTCGACCCC	AREASLEYDYVWGSSHLTWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  S  I  S  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1527   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCTCCATCAGTAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ...................C.........................T............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  T  G  S  T  K  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1527   91   TGGATTGGGTATATGTATTACACTGGGAGCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAT  180
V  96.3% (236/245)  IGHV4-59*01  139  ..............C.......G............C................A....................................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  E  A  S  L  E  Y  D  Y  V 
                    Query_1527   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGAGCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAAGCTAGTCTGGAATATGATTACGTT  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............C............C....................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (22/22)   IGHD3-16*01  5    ------------------------------------------------------------------------------............  16

                                      -IMGT--------------------------->                                  
                                       W  G  S  S  H  L  T  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1527   271  TGGGGGAGTTCTCACCTCACCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  337
D  100.0% (22/22)   IGHD3-16*01  17   ..........---------------------------------------------------------  26
J  100.0% (47/47)   IGHJ5*02     5    --------------------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_2760

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           262     5e-72
IGHD3-10*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAC	TGGAGGGGGCTTCGGGAGC	TTATTATAAC	GGACGGCGGGGACT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACTGGAGGGGGCTTCGGGAGCTTATTATAACGGACGGCGGGGACTTATGGACGTC	ARLEGASGAYYNGRRGLMDV	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	23	7	0	76.7
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	12	9	0	57.1
FR3-IMGT	132	245	114	101	13	0	88.6
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	249	208	41	0	83.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  F  S  T  S  D  Y  W  V  W  I  R  Q  T  P  G  K  G  
                    Query_1528   4    CCCTGAGACTCTCCTGTACCGTCTCTGGCGGCTCCATCTTCAGTACTTCTGACTACTGGGTCTGGATCCGCCAGACCCCCGGGAAGGGGC  93
V  83.5% (208/249)  IGHV4-39*01  50   .....TCC...A....C..T........T.........AG.....G.AG.T.........G.............C....A..........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  A  V  H  H  T  R  R  T  Y  Y  N  P  S  L  K  S  R  S  T  M  S  V  D  I  S  
                    Query_1528   94   TGGAGTGGATTGGGGCTGTTCATCACACTAGAAGAACCTACTACAACCCGTCCCTCAAAAGTCGATCCACCATGTCCGTAGACATATCTA  183
V  83.5% (208/249)  IGHV4-39*01  140  ..............AG.A.CT..T.T.G.G.G..C.......................G......GT......A..........CG..C.  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      R  N  Q  F  S  L  T  L  R  S  V  T  A  A  D  T  S  V  Y  Y  C  A  R  L  E  G  A  S  G  A  
                    Query_1528   184  GGAACCAGTTCTCCCTGACCCTGAGGTCTGTGACCGCCGCAGACACGTCTGTTTATTACTGTGCGCGACTGGAGGGGGCTTCGGGAGCTT  273
V  83.5% (208/249)  IGHV4-39*01  230  A.................AG.....C.....................G....G............A...---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-10*01  22   ----------------------------------------------------------------------------------------..  23

                                      R3-IMGT------------------------>                                 
                                      Y  Y  N  G  R  R  G  L  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_1528   274  ATTATAACGGACGGCGGGGACTTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTGTCCTCA  338
D  100.0% (10/10)   IGHD3-10*01  24   ........---------------------------------------------------------  31
J  95.3% (41/43)    IGHJ6*02     20   ----------------------................................C...C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_174398

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         315     5e-88
IGHD2-15*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCCCTCAG	ATTGTAGTG	ATGACAGGTGCAACAACGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCCCTCAGATTGTAGTGATGACAGGTGCAACAACGCGTTTGACTAC	ARGPSDCSDDRCNNAFDY	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	102	12	0	89.5
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  F  S  I  S  R  G  Y  F  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_1529     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCAGCAGGGGTTATTTCTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  91.0% (223/245)  IGHV4-38-2*01  49   ...............................A............T.....C.A.....................................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  A  S  I  Y  H  N  G  A  A  F  S  T  P  S  L  K  S  R  V  T  I  S  V  D  A  S  K 
                    Query_1529     91   GAGTGGATTGCAAGTATCTATCATAATGGGGCCGCCTTCTCCACCCCGTCCCTCAAGAGTCGGGTCACCATATCAGTTGACGCGTCCAAG  180
V  91.0% (223/245)  IGHV4-38-2*01  139  ..........GG.............G....AG.A...A..A..A..................A..............A...A........  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                         N  Q  F  S  L  K  V  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  G  P  S  D  C  S  D  D 
                    Query_1529     181  AACCAGTTCTCCCTGAAGGTGACGTCTGTGACTGCCGCAGACACGGCCTTATATTACTGTGCGAGGGGCCCCTCAGATTGTAGTGATGAC  270
V  91.0% (223/245)  IGHV4-38-2*01  229  ..................C...GC........C...............G.G..............-------------------------  293
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (9/9)     IGHD2-15*01    6    ----------------------------------------------------------------------------.........-----  14

                                        GT--------------------->                                  
                                         R  C  N  N  A  F  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_1529     271  AGGTGCAACAACGCGTTTGACTACTGGGGCCAGGGAACACTGGTCATCGTCTCCTCAG  328
J  95.3% (41/43)    IGHJ4*02       6    ---------------.......................C.......C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_96058

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           375     3e-106
IGHD6-13*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCTCGCCACAGAA	AGCAGCAGCT	ATAACTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCTCGCCACAGAAAGCAGCAGCTATAACTTACTACTTTGACTAC	ARVSPQKAAAITYYFDY	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	242	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  H  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1530   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACCACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.2% (242/244)  IGHV4-59*01  49   ................................................T.........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1530   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  99.2% (242/244)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  P  Q  K  A  A  A  I 
                    Query_1530   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTCTCGCCACAGAAAGCAGCAGCTATA  270
V  99.2% (242/244)  IGHV4-59*01  229  ....................C...........................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  7    -----------------------------------------------------------------------------..........---  16

                                      ----------------->                                  
                                       T  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1530   271  ACTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  100.0% (48/48)   IGHJ4*02     1    ----................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_322309

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           248     8e-68
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	ARGLLIEDPNYVWGSFRRNHNCYTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	92	22	0	80.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	201	43	0	82.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  R  L  E 
                    Query_1531   1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGAGACTGGAG  90
V  82.4% (201/244)  IGHV4-59*01  49   ..................A....C.......G.......A...G..........AG....A.C........C.......A.G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_1531   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  82.4% (201/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  N  Y 
                    Query_1531   181  CAGTTGTCTCTCAACCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCAACTAT  270
V  82.4% (201/244)  IGHV4-59*01  229  .....C..C..G..G....G.TCT.....................GT.....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_1531   271  GTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  94.7% (36/38)    IGHJ3*01     13   --------------------------------------...................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_313178

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     2e-95
IGHD3-10*01                                                                                           10.3    117  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_1532   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-21*01  47   ............................................AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  E  Y  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_1532   91   AGTGGGTCTCATCCATTAGTAGTACTAGTGAATACATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  93.6% (233/249)  IGHV3-21*01  137  ........................G....AGT........C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_1532   181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTT  270
V  93.6% (233/249)  IGHV3-21*01  227  ............A......A..............................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1532   271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_96052

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           325     2e-91
IGHD3-3*01                                                                                            35.3    3e-06
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACGATTTTTGGAGTGGTT	GAGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACGATTTTTGGAGTGGTTGAGCATGGACGTG	ARGRFLEWLSMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	23	4	0	85.2
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  N  G  G  S  I  N  T  Y  F  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_1533   1    ACCCTGTCCCTCACCTGCAGTGTCAACGGTGGCTCCATCAATACTTACTTCTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.6% (226/244)  IGHV4-59*01  49   ...................C....TCT.............G..G.....A...................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  S  Y  N  P  S  L  T  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1533   91   TGGATTGGCTATATCTACTACAGTGGGACCACCAGTTACAATCCCTCCCTCACGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  92.6% (226/244)  IGHV4-59*01  139  ........G........T..........G.....AC.....C..........A.....................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  F  L  E  W  L  S  M 
                    Query_1533   181  CAGTTTTCCCTGAAGCTGACCTCTGCGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGACGATTTTTGGAGTGGTTGAGCATG  270
V  92.6% (226/244)  IGHV4-59*01  229  .....C.............G.....T......................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (18/18)   IGHD3-3*01   6    -----------------------------------------------------------------..................-------  23
J  92.9% (39/42)    IGHJ6*02     21   ---------------------------------------------------------------------------------------...  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_1533   271  GACGTGTGGGGCCAAGGGACCACAGTCATCGTCTCCTCA  309
J  92.9% (39/42)    IGHJ6*02     24   .....C.................G....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_96053

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD6-19*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTA	GGGTATAGTAGTGGCTGGTAC	TATGACAAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTAGGGTATAGTAGTGGCTGGTACTATGACAAATTTGACTAC	AKDVGYSSGWYYDKFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1534   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGGCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ...............................................T...C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  G  S  G  S  I  R  E  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1534   91   AGTGGGTCTCAAGTGTTAGTGGAAGTGGTAGTATCAGAGAATACGCAGAATCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  ...........GC.A.......T......G...G..C.T.C........C........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  *  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  V  G  Y  S  S  G  
                    Query_1534   181  AGAACACGCTGTAGTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTATTGTGCGAAAGATGTAGGGTATAGTAGTGGCT  270
V  93.6% (234/250)  IGHV3-23*01  227  .............TC.....................................A.....C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.2% (20/21)    IGHD6-19*01  1    --------------------------------------------------------------------------........C.......  16

                                      GT-------------------->                                  
                                      W  Y  Y  D  K  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1534   271  GGTACTATGACAAATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.2% (20/21)    IGHD6-19*01  17   .....----------------------------------------------------  21
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_96050

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           330     9e-93
IGHD1-1*01                                                                                            14.1    7.9  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	246	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	250	5	3	2	0	60
Total	N/A	N/A	247	229	18	0	92.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G  
                    Query_1535   4    CCCTGAGACTCTCCTGTACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  92.7% (229/247)  IGHV4-39*01  50   .....TCC...A....C.....C.....................AG..............G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S  
                    Query_1535   94   TGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCCA  183
V  92.7% (229/247)  IGHV4-39*01  140  ....................T..........................C.........A..................C.............  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G  
                    Query_1535   184  AGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGCC  273
V  92.7% (229/247)  IGHV4-39*01  230  .................A.......C................................C...G.G..-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD1-1*01   9    -------------------------------------------------------------------.......----------------  15
J  100.0% (38/38)   IGHJ4*02     10   ------------------------------------------------------------------------------............  21

                                                                
                                      Q  G  T  L  V  T  V  S  S 
                    Query_1535   274  AGGGAACCCTGGTCACCGTCTCCTCA  299
J  100.0% (38/38)   IGHJ4*02     22   ..........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_96051

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            313     1e-87
IGHD2-8*02                                                                                            19.9    0.15 
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AAAGTGGGCTC	TACTGGTGGT	A	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAAAGTGGGCTCTACTGGTGGTAACTTTGACTAC	ARKVGSTGGNFDY	230	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	48	3	0	94.1
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	112	2	0	98.2
CDR3-IMGT (germline)	230	235	6	6	0	0	100
Total	N/A	N/A	222	211	11	0	95


Alignments

                                     <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                      S  G  F  I  F  T  H  Y  W  M  S  W  V  R  Q  A  P  G  K  W  L  E  W  V  A  D  I  K  Q  D 
                    Query_1536  14   TCTGGATTCATTTTTACTCACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGTGGCTGGAGTGGGTTGCCGACATAAAGCAGGAT  103
V  95.0% (211/222)  IGHV3-7*03  73   ..........CC....G.AG.....................................G.............G...A..........A...  162
                                      S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  K  Q  D 

                                     -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                      G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  V  Y  L  Q  M  N 
                    Query_1536  104  GGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCAGTATATCTGCAAATGAAC  193
V  95.0% (211/222)  IGHV3-7*03  163  ........................................................................C.G...............  252
                                      G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                     -----------------------------------><--------------CDR3-IMGT-------------->               
                                      S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  K  V  G  S  T  G  G  N  F  D  Y  W  G  Q  G  T 
                    Query_1536  194  AGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAAAAGTGGGCTCTACTGGTGGTAACTTTGACTACTGGGGCCAGGGAACC  283
V  95.0% (211/222)  IGHV3-7*03  253  ..........................................------------------------------------------------  294
                                      S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  100.0% (10/10)   IGHD2-8*02  10   -----------------------------------------------------..........---------------------------  19
J  100.0% (45/45)   IGHJ4*02    4    ----------------------------------------------------------------..........................  29

                                                        
                                      L  V  T  V  S  S  
                    Query_1536  284  CTGGTCACCGTCTCCTCAG  302
J  100.0% (45/45)   IGHJ4*02    30   ...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_96057

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1537   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_1537   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_1537   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1537   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_96054

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           251     9e-69
IGHD1-26*01                                                                                           10.3    124  
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAAA	TGGGCGGGCCACAGCATCGGAG	GTGGG	GCTGAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAATGGGCGGGCCACAGCATCGGAGGTGGGGCTGAATACGGCATGTACGTC	VKWAGHSIGGGAEYGMYV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	41	10	0	80.4
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	93	21	0	81.6
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	204	44	0	82.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  F  I  F  D  R  Y  A  V  G  W  V  R  Q  R  T  G  Q  G  L  
                    Query_1538   1    GGTCCCTGAGACTCTCCTGTGAAGGCTCTGGATTCATCTTTGACAGATACGCCGTGGGCTGGGTCCGCCAGCGTACAGGACAGGGGCTTG  90
V  82.3% (204/248)  IGHV3-23*01  47   .....................C..C...........C....AG...C..T...A..A..............GC.C....GA.......G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  T  G  G  A  T  N  Y  A  D  P  A  K  G  R  F  V  I  S  R  D  N  A  
                    Query_1538   91   AGTGGGTCTCAGGAATTAGCGGGACTGGTGGTGCCACAAACTACGCAGACCCCGCGAAGGGCCGGTTCGTCATCTCCAGGGACAATGCCA  180
V  82.3% (204/248)  IGHV3-23*01  137  ............CT.....T..T.G.......AG....T...........T...T.............AC.........A......T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  T  V  V  F  L  Q  M  N  R  L  R  A  E  D  S  A  L  Y  Y  C  V  K  W  A  G  H  S  I  G  
                    Query_1538   181  AGACTGTAGTATTTTTGCAAATGAATAGACTGAGAGCCGAGGACTCGGCCCTATATTATTGTGTGAAATGGGCGGGCCACAGCATCGGAG  270
V  82.3% (204/248)  IGHV3-23*01  227  ...ACACGC.G.A.C..........C..C...............A.....G.......C....C....----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      IMGT--------------------->                             
                                      G  G  A  E  Y  G  M  Y  V  W  G  Q  G  T  T  V  T  V  S
                    Query_1538   271  GTGGGGCTGAATACGGCATGTACGTCTGGGGCCAAGGGACTACGGTCACCGTCTC  325
D  100.0% (5/5)     IGHD1-26*01  7    .....--------------------------------------------------  11
J  93.2% (41/44)    IGHJ6*02     15   -----------.....T...G...................C..............  58


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_96055

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           288     5e-80
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TCGGGA	TGGCTACAATT	TTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATCGGGATGGCTACAATTTTCTTGACTCC	ARDRDGYNFLDS	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	42	9	0	82.4
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	104	10	0	91.2
CDR3-IMGT (germline)	246	253	8	7	1	0	87.5
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  D  S  L  I  N  G  G  N  Y  W  S  R  I  R  Q  R  P  G  K  E  
                    Query_1539   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCCTCATCAATGGCGGTAACTACTGGAGTCGGATCCGCCAGCGCCCGGGGAAGGAGT  93
V  86.8% (217/250)  IGHV4-31*02  50   .....TCC...A..................G....A...G..G...T...T..........CT............A...A.......GCC  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  T  Y  Y  S  G  K  T  Q  Y  N  P  S  L  K  G  R  L  T  I  S  P  D  T  S  
                    Query_1539   94   TGGAGTGGATTGGCTATACCTATTACAGTGGGAAGACCCAGTACAACCCGTCCCTCAAGGGTCGACTCACCATATCACCTGACACGTCTA  183
V  86.8% (217/250)  IGHV4-31*02  140  .............G..C.T..............GC...T.C..................A.....G.T.........GTA..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  D  R  D  G  Y  N  F  
                    Query_1539   184  AGAACCAGTTCTCCCTGAAGCTGAGTTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGATCGGGATGGCTACAATTTTC  273
V  86.8% (217/250)  IGHV4-31*02  230  .........................C...............................A.........A..--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD5-12*01  11   ----------------------------------------------------------------------------.......G...---  21

                                      ------->                                  
                                      L  D  S  W  G  Q  G  I  L  V  T  V  P  S  
                    Query_1539   274  TTGACTCCTGGGGCCAGGGGATCCTGGTCACCGTCCCCTCAG  315
J  90.5% (38/42)    IGHJ4*02     7    ......A............A.C.............T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_289708

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           350     8e-99
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAA	TACGGTTTTTGGAGTGGTTA	ACCA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCAATACGGTTTTTGGAGTGGTTAACCATGACTAC	ASNTVFGVVNHDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	233	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  Y  S  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1540   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTACAGTGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  96.3% (233/242)  IGHV4-34*01  49   .....................................T.....G..............................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  Y  G  R  T  N  F  N  P  S  L  E  S  R  V  T  I  L  V  D  T  T  K  N 
                    Query_1540   91   TGGATTGGGGAAATCAATCATTATGGAAGAACCAACTTCAACCCGTCCCTCGAGAGTCGAGTCACCATATTAGTAGACACGACCAAGAAC  180
V  96.3% (233/242)  IGHV4-34*01  139  .....................AG......C.......A.............A..................C..........T........  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  N  T  V  F  G  V  V  N  H 
                    Query_1540   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGCAATACGGTTTTTGGAGTGGTTAACCAT  270
V  96.3% (233/242)  IGHV4-34*01  229  ..............................................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.0% (19/20)    IGHD3-3*01   5    -----------------------------------------------------------------....A...............-----  24
J  100.0% (41/41)   IGHJ4*02     8    -----------------------------------------------------------------------------------------.  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1540   271  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (41/41)   IGHJ4*02     9    ........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_289704

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           371     7e-105
IGHD6-19*01                                                                                           12.2    35    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	GCTCCAG	GGCTGG	GATT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCCAGGGCTGGGATTCTTTGACTAT	AAPGLGFFDY	289	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	68	7	0	90.7
CDR1-IMGT	76	99	24	18	6	0	75
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	19	5	0	79.2
FR3-IMGT	175	288	114	105	9	0	92.1
CDR3-IMGT (germline)	289	291	3	3	0	0	100
Total	N/A	N/A	291	264	27	0	90.7


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  A  S  G  N  T  L  T 
                    Query_1541   1    CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCGTCCGTGAAAGTTGCCTGCAAGGCATCCGGAAACACCCTCACC  90
V  90.7% (264/291)  IGHV1-46*01  1    .....G.....G...................................C..A.....G...T.............T...T.....T.....  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  N  F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  N  K  A  T  Y 
                    Query_1541   91   AACAACTTCATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTAATAAGGCAACCTAT  180
V  90.7% (264/291)  IGHV1-46*01  91   .G.T...AT..................................................................GG..GCA...G...C  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  L  T  M  T  R  V  T  S  T  R  T  V  Y  M  E  L  S  N  L  R  S  E  D 
                    Query_1541   181  GCACAGAAGTTCCAGGGCAGACTGACCATGACTAGGGTCACGTCCACGAGAACAGTCTACATGGAGCTGAGCAACCTGAGATCTGAGGAC  270
V  90.7% (264/291)  IGHV1-46*01  181  .....................G.C........C....A............C......................G................  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------CDR3-IMGT--------->                                  
                                       T  A  V  Y  Y  C  A  A  P  G  L  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_1541   271  ACGGCCGTGTATTACTGCGCGGCTCCAGGGCTGGGATTCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  352
V  90.7% (264/291)  IGHV1-46*01  271  .................T...-------------------------------------------------------------  291
                                       T  A  V  Y  Y  C  A                                                              
D  100.0% (6/6)     IGHD6-19*01  13   ----------------------------......------------------------------------------------  18
J  95.5% (42/44)    IGHJ4*02     5    --------------------------------------.........C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_289707

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*05                                                                                           380     1e-107
IGHD2-2*01                                                                                            18.0    0.66  
IGHJ4*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*05	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCGTCGGTG	CCAGCTGCT	CTTTTGCCCCACC	TTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCGTCGGTGCCAGCTGCTCTTTTGCCCCACCTTGAATAC	ARASVPAALLPHLEY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	265	22	0	92.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  T  F  R  N  Y 
                    Query_1542   2    CAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAGAAATTAC  91
V  92.3% (265/287)  IGHV1-69*05  7    .........................................................................G.........C.GC..T  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  N  Y  A  Q 
                    Query_1542   92   GGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGAACAACAAACTACGCACAG  181
V  92.3% (265/287)  IGHV1-69*05  97   .C.....G...........................G...................................T...G..............  186
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  R  D  R  V  T  I  T  T  D  E  F  T  S  T  A  Y  M  E  L  F  S  L  K  S  D  D  T  A 
                    Query_1542   182  AAGTTCCGGGACAGAGTCACCATTACTACGGACGAATTCACGAGCACAGCCTACATGGAGTTATTCAGTCTGAAATCTGACGACACGGCC  271
V  92.3% (265/287)  IGHV1-69*05  187  .......A..G.........G.....C..........C......................C.GAG...C....G......G.........  276
                                       K  F  Q  G  R  V  T  I  T  T  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  A  S  V  P  A  A  L  L  P  H  L  E  Y  W  G  Q  G  T  L  V  V  V  S  S 
                    Query_1542   272  GTGTATTACTGTGCGAGGGCGTCGGTGCCAGCTGCTCTTTTGCCCCACCTTGAATACTGGGGTCAGGGAACCCTGGTCGTCGTCTCCTCA  361
V  92.3% (265/287)  IGHV1-69*05  277  .................-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  100.0% (9/9)     IGHD2-2*01   18   ---------------------------.........------------------------------------------------------  26
J  90.5% (38/42)    IGHJ4*02     7    -------------------------------------------------....C........C...............AC..........  47

                                       
                                       
                    Query_1542   362  G  362
J  90.5% (38/42)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_289706

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           290     2e-80
IGHD1-1*01                                                                                            10.3    122  
IGHJ5*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCAGGGGATA	GAACG	TCGGGTCCAAAG	GGTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGGGGATAGAACGTCGGGTCCAAAGGGTCCGCCCCC	ARDPTGRG*NVGSKGSAP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	96	18	0	84.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	215	30	0	87.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  R  F  Y  W  C  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_1543   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGTCGCTTCTACTGGTGCTGGATCCGGCAGCCCCCAGGGCAGGGACTGGAG  90
V  87.8% (215/245)  IGHV4-59*01  49   ...............................G..........A.T.A.......A.......................A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  F  S  G  I  T  N  S  N  P  S  L  K  P  R  A  T  I  S  V  S  T  S  T  G 
                    Query_1543   91   TGGATTGGATATATCCATTTCAGTGGCATTACCAACTCCAACCCCTCCCTCAAGCCTCGGGCCACCATTTCAGTATCCACGTCCACGGGC  180
V  87.8% (215/245)  IGHV4-59*01  139  ........G......T...A......G.GC.......A................AG...A.T......A......GA........A.AA.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  R  P  V  T  G  A  G  A  A  V  Y  Y  C  A  R  D  P  T  G  R  G  *  N  V 
                    Query_1543   181  CAGTTCTCCCTGAAACTGAGGCCTGTGACCGGTGCGGGCGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGGGGATAGAACGTC  270
V  87.8% (215/245)  IGHV4-59*01  229  ..............G.....CT.........C.....A.A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD1-1*01   11   -----------------------------------------------------------------------------------.....--  15

                                      -------------------->                                
                                       G  S  K  G  S  A  P  R  G  Q  G  T  L  V  T  V  P  S
                    Query_1543   271  GGGTCCAAAGGGTCCGCCCCCAGGGGCCAGGGAACCCTGGTCACCGTCCCCTC  323
J  90.7% (39/43)    IGHJ5*02     7    ----------...T..A....T..........................T....  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_289701

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ2*01                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	TACTATAATCCTAGTGGTTATTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACTATAATCCTAGTGGTTATTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGYYGYWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	239	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_1544   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.6% (239/245)  IGHV4-59*01  49   ............................................................A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  I  S  K  N 
                    Query_1544   91   TGGATTGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGATATCTCCAAGAAC  180
V  97.6% (239/245)  IGHV4-59*01  139  ........G....................................................................C.CG.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  Y  Y 
                    Query_1544   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACTACTATAATCCTAGTGGTTATTAC  270
V  97.6% (239/245)  IGHV4-59*01  229  ...................G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (21/24)    IGHD3-22*01  5    ------------------------------------------------------------------......G..AG.............  28

                                      -------------------->                                  
                                       G  Y  W  Y  F  D  L  W  G  R  G  P  L  V  T  V  S  S  
                    Query_1544   271  GGGTACTGGTACTTCGATCTCTGGGGCCGTGGCCCCCTGGTCACTGTCTCCTCAG  325
J  98.1% (51/52)    IGHJ2*01     2    ---..............................A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_289700

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         380     1e-107
IGHD6-19*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCTTAAGGTCAATCGCGTC	CAGTGGCTGG	GCGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCA	ARHPLRSIASSGWAS	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	77	72	65	7	0	90.3
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	101	13	0	88.6
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  T  F  T  N 
                    Query_1545     6    GTCCAGCTTGTGCAGTCTGGAGGAGAGGTGAAGAAGCCCGGGGAGTCTTTGAGGATTTCCTGTAAGGCTTCTGGATACACCTTTACCAAC  95
V  91.8% (267/291)  IGHV5-10-1*01  4    ..G.....G.............C.........A...............C.......C..........G...........G........G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  W  I  S  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  R  Y  S 
                    Query_1545     96   TACTGGATCAGCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGACCCTAGTGACTCTTATACCCGCTACAGT  185
V  91.8% (267/291)  IGHV5-10-1*01  94   ........................A.....................................T..................AA......C  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  D  G  N  V  T  I  S  V  D  E  S  I  S  T  A  Y  L  Q  W  S  S  L  M  A  S  D  T 
                    Query_1545     186  CCGTCCTTCGACGGCAACGTCACCATCTCAGTTGACGAGTCCATCAGTACTGCCTATTTGCAGTGGAGCAGCCTGATGGCCTCGGACACC  275
V  91.8% (267/291)  IGHV5-10-1*01  184  .........C.A...C...............C....A..........C........CC..................A.............  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><-----------------CDR3-IMGT----------------->                              
                                         A  M  Y  Y  C  A  R  H  P  L  R  S  I  A  S  S  G  W  A  S  W  G  Q  G  T  L  V  T  V  S 
                    Query_1545     276  GCCATGTATTATTGTGCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCATGGGGCCAGGGAACCCTGGTCACCGTCTCC  365
V  91.8% (267/291)  IGHV5-10-1*01  274  ...........C.........---------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                      
D  100.0% (10/10)   IGHD6-19*01    9    --------------------------------------------..........------------------------------------  18
J  100.0% (34/34)   IGHJ4*02       15   ------------------------------------------------------------..............................  44

                                            
                                         S  
                    Query_1545     366  TCAG  369
J  100.0% (34/34)   IGHJ4*02       45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_289703

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           297     8e-83
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGGGA	AGGCTCTTGCCGGCTC	TGGCTGGTAC	AAGGAGGGCAT	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAGGCTCTTGCCGGCTCTGGCTGGTACAAGGAGGGCATTTACTACTCCTACTACGGTATCGACGTC	GKALAGSGWYKEGIYYSYYGIDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	218	28	0	88.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1546   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCACCTATGCCCTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  88.6% (218/246)  IGHV3-30*04  47   ...........................................T.G......TA....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  V  S  F  N  G  N  G  Q  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  D  S  
                    Query_1546   91   AGTGGGTGGCACTTGTTTCGTTTAATGGAAATGGTCAATACTACGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACGATTCCA  180
V  88.6% (218/246)  IGHV3-30*04  137  ...........G..A.A..A.A.G......G.AA.A...................................A...........A......  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  T  T  I  Y  L  E  M  N  D  L  R  D  N  D  T  A  V  Y  F  C  G  K  A  L  A  G  S  G  W  
                    Query_1546   181  AGACCACAATTTATCTGGAAATGAACGACCTGAGAGATAACGACACGGCTGTGTATTTCTGTGGGAAGGCTCTTGCCGGCTCTGGCTGGT  270
V  88.6% (218/246)  IGHV3-30*04  227  ...A...GC.G......C........AG........C.G.G................A.....C..------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD6-19*01  12   ----------------------------------------------------------------------------------........  19

                                      --CDR3-IMGT----------------------------->                                 
                                      Y  K  E  G  I  Y  Y  S  Y  Y  G  I  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1546   271  ACAAGGAGGGCATTTACTACTCCTACTACGGTATCGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
D  100.0% (10/10)   IGHD6-19*01  20   ..------------------------------------------------------------------------  21
J  96.7% (59/61)    IGHJ6*02     2    -------------........A............G.......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_289702

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           315     5e-88
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCCGCCGC	TTCGGGGA	CTTGACCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCCGCCGCTTCGGGGACTTGACCCTTGACTAC	ARDGRRFGDLTLDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	14	7	0	66.7
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	224	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  L  S  V  S  S  N  Y  M  S  W  F  R  Q  P  P  G  K  G  L  
                    Query_1547   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGGCTCAGCGTCAGTAGCAACTACATGAGCTGGTTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  90.7% (224/247)  IGHV3-53*01  47   ........................C.......T...C.........................G........G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  L  Y  S  G  G  V  T  F  F  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  R  
                    Query_1547   91   AGTGGGTCTCAGTTCTTTATAGTGGAGGAGTCACGTTCTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGATTCCAGGA  180
V  90.7% (224/247)  IGHV3-53*01  137  ..............A.......C..T..TAG...A.A..A........................................A......A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      S  T  L  Y  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  F  C  A  R  D  G  R  R  F  G  D  L  
                    Query_1547   181  GCACATTGTATCTTCAAATGAACAACCTCAGAGCCGAGGACACGGCCGTCTATTTCTGTGCGAGAGATGGCCGCCGCTTCGGGGACTTGA  270
V  90.7% (224/247)  IGHV3-53*01  227  A...GC..................G...G....................G....A............-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  13   -----------------------------------------------------------------------------........-----  20

                                      ---------->                                  
                                      T  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1547   271  CCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (42/42)   IGHJ4*02     7    ---..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_297959

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1548   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  98.4% (239/243)  IGHV4-59*01  49   ......................................................................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1548   91   TGGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  .........T................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_1548   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (18/20)    IGHD5-18*01  1    ----------------------------------------------------------------..........C.....T...------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1548   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_297958

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_1549   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_1549   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_1549   181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_1549   271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_297957

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	273	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_1550   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  95.5% (273/286)  IGHV5-51*01  6    ..................................................A...............T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_1550   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCTTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGACACCAGATACAGTCC  180
V  95.5% (273/286)  IGHV5-51*01  96   ......................A.......G......C......G..............................T...........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  N  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_1550   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  95.5% (273/286)  IGHV5-51*01  186  ....................C...................A...G.......................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        M  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  P  G  T  L  V  T  V  S  S 
                    Query_1550   271  CATGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCA  352
V  95.5% (273/286)  IGHV5-51*01  276  ................------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                   
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     8    ------------------------------------------..............A.........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_297956

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           291     5e-81
IGHD2-15*01                                                                                           14.1    8.6  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGGGGATTTCGAGAA	GGTGGTA	AATCGGTCAGT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGGGGATTTCGAGAAGGTGGTAAATCGGTCAGTTTTGCCTAC	ARDGGFREGGKSVSFAY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  S  T  Y  T  M  N  W  L  R  Q  A  P  G  K  E  P  
                    Query_1551   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGGTTCAGTACTTATACTATGAACTGGCTTCGCCAGGCTCCAGGGAAGGAGCCGC  90
V  87.2% (218/250)  IGHV3-21*01  47   ....................................CC.......GC....GC.........G.C...................G..T.G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  S  V  S  G  D  G  T  Y  I  Y  Y  A  E  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1551   91   AATGGGTCGCATCTGTGAGTGGAGATGGAACCTACATATACTACGCAGAATCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  87.2% (218/250)  IGHV3-21*01  137  .G......T....CA.T...A.TAG.A.T.GT.................C...G...................................A  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      E  N  S  V  F  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  G  G  F  R  E  G  
                    Query_1551   181  AGAACTCAGTGTTTCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCTGTCTATTATTGTGCGAGAGACGGGGGATTTCGAGAAGGTG  270
V  87.2% (218/250)  IGHV3-21*01  227  ........C...A.......................C...............G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-15*01  14   --------------------------------------------------------------------------------------....  17

                                      GT-------------------->                                  
                                      G  K  S  V  S  F  A  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_1551   271  GTAAATCGGTCAGTTTTGCCTACTGGGGCCAGGGAACCCTTGTCATCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD2-15*01  18   ...------------------------------------------------------  20
J  93.0% (40/43)    IGHJ4*02     6    --------------....A.....................G....C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_297955

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           297     7e-83
IGHD2-8*01                                                                                            10.3    120  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACGGGTCAGCAATTGGCAC	CTAAT	CTTGAGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATACGGGTCAGCAATTGGCACCTAATCTTGAGTCA	VRDTGQQLAPNLES	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  D  T  F  S  I  F  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1552   1    GGTCCCTGAGACTCTCCTGTGAAGGATCTGGAGACACTTTTAGCATTTTCTGGATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  88.0% (220/250)  IGHV3-74*01  47   .....................C..CC......TT...C..C..T.GC.A.....................A...................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  H  V  G  T  I  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1552   91   TTTGGGTCTCACGCATTAATCATGTTGGGACAATCACAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  88.0% (220/250)  IGHV3-74*01  137  .G...........T......AG..A.....GT.G.....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  F  C  V  R  D  T  G  Q  Q  L  A  
                    Query_1552   181  AGAACACCCTCTATCTGCAAATGAACAGTCTGAGAGCCGACGACACGGCAGTATATTTTTGTGTCAGAGATACGGGTCAGCAATTGGCAC  270
V  88.0% (220/250)  IGHV3-74*01  227  .......G..G.............................G........T..G....AC....CA.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ------------->                                  
                                      P  N  L  E  S  W  G  R  G  T  L  V  T  V  S  S  
                    Query_1552   271  CTAATCTTGAGTCATGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (5/5)     IGHD2-8*01   12   .....-------------------------------------------  16
J  97.1% (33/34)    IGHJ4*02     15   --------------.......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_297954

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHD1-26*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGT	GGTACAGTGGG	TGGCCGGTACAGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCCGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1553   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  G  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1553   91   AGTGGGTCTCATCCATTAGTGGGGGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.0% (230/250)  IGHV3-21*01  137  ....................A.TA..A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_1553   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.0% (230/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD1-26*01  1    ----------------------------------------------------------------------------------....T...  8

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1553   271  GGGTGGCCGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  90.9% (10/11)    IGHD1-26*01  9    ...---------------------------------------------------------------  11
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_297953

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           343     2e-96
IGHD2-2*01                                                                                            29.5    2e-04
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGACCTATAA	ATATTGTAGTAGTAC	TAACAGCTGCTATTCCTTC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGACCTATAAATATTGTAGTAGTACTAACAGCTGCTATTCCTTCTTCGACCCC	ARGTYKYCSSTNSCYSFFDP	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	24	0	0	100
FR2-IMGT	51	101	51	51	0	0	100
CDR2-IMGT	102	125	24	23	1	0	95.8
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	231	225	6	0	97.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  T  
                    Query_1554   16   GTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGTACTA  105
V  97.4% (225/231)  IGHV3-74*01  65   .......................................................................................T..  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  
                    Query_1554   106  ATAGTGATGGGAGTAGCACAAGCTACGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGTTGTATTTGC  195
V  97.4% (225/231)  IGHV3-74*01  155  ..................................C.............................................C.....C...  244
                                      N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------------CDR3-IMGT-----------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  T  Y  K  Y  C  S  S  T  N  S  C  Y  
                    Query_1554   196  AAATGAATAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGACCTATAAATATTGTAGTAGTACTAACAGCTGCTATT  285
V  97.4% (225/231)  IGHV3-74*01  245  .......C......................................A....---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (15/15)   IGHD2-2*01   4    -------------------------------------------------------------...............--------------  18

                                      ------------->                                  
                                      S  F  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1554   286  CCTTCTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
J  100.0% (43/43)   IGHJ5*02     9    -----...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_297952

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           304     9e-85
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              43.0    4e-08


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGGGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGGGTTGGTTCGGCCCC	ARGLGRGWFGP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	219	25	0	89.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  G 
                    Query_1555   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGGG  90
V  89.8% (219/244)  IGHV4-59*01  49   ......................................C...A..T.........GC....................G..........A.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_1555   91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  89.8% (219/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  P  A  I  Y  F  C  A  R  G  L  G  R  G  W  F  G  P 
                    Query_1555   181  CAGTTCTCCCTCAAGGTGAGGTCTGTGACCGCAGCGGACCCGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGGGTTGGTTCGGCCCC  270
V  89.8% (219/244)  IGHV4-59*01  229  ...........G...C....C...........T......A.....G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  82.6% (38/46)    IGHJ5*02     6    ------------------------------------------------------------------------------.......A....  17

                                                                        
                                       W  G  P  G  A  L  G  S  V  F  S  
                    Query_1555   271  TGGGGCCCGGGGGCCCTGGGTTCCGTCTTCTCAG  304
J  82.6% (38/46)    IGHJ5*02     18   .......A...AA......TCA......C.....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_297951

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           330     1e-92
IGHD6-19*01                                                                                           18.0    0.59 
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AC	GTGGCTGGT	TTGTCGCTTTGAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACGTGGCTGGTTTGTCGCTTTGACCTACTACGGTATGGACGTC	ARERGWFVALTYYGMDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	22	2	0	91.7
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	233	222	11	0	95.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  F  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 
                    Query_1556   13   TGTGCAGCCTCTGGATTCACCTTCAGTTTTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATT  102
V  95.3% (222/233)  IGHV3-48*03  64   ...........................AG.............................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  S  G  T  T  K  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  H  A  N  N  S  L  Y  L 
                    Query_1556   103  AGTAGTAGTGGTACTACCAAAGACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACCATGCCAACAACTCACTGTATCTA  192
V  95.3% (222/233)  IGHV3-48*03  154  .............G.....T.T............................................A.C.....G..............G  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><--------------------CDR3-IMGT---------------
                                       Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  E  R  G  W  F  V  A  L  T  Y  Y  G  M 
                    Query_1556   193  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTACTACTGTGCGAGAGAACGTGGCTGGTTTGTCGCTTTGACCTACTACGGTATG  282
V  95.3% (222/233)  IGHV3-48*03  244  .................................G....T..............-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (9/9)     IGHD6-19*01  11   -------------------------------------------------------.........--------------------------  19
J  100.0% (52/52)   IGHJ6*02     11   -----------------------------------------------------------------------------.............  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1556   283  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  321
J  100.0% (52/52)   IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_297950

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_1557   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  98.3% (284/289)  IGHV5-51*03  6    ..............................................................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_1557   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ...................................................G............................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1557   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1557   271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  98.3% (284/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_175392

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            313     1e-87
IGHD3-16*01                                                                                           12.2    29   
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGGC	GGGGGA	CCTACCGTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGCGGGGGACCTACCGTGTTTGACTAC	ARGGGGPTVFDY	226	261	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	11	12	2	2	0	0	100
CDR1-IMGT	13	39	27	25	2	0	92.6
FR2-IMGT	40	90	51	49	2	0	96.1
CDR2-IMGT	91	111	21	20	1	0	95.2
FR3-IMGT	112	225	114	108	6	0	94.7
CDR3-IMGT (germline)	226	232	7	7	0	0	100
Total	N/A	N/A	222	211	11	0	95


Alignments

                                        <--------CDR1-IMGT--------><--------------------FR2-IMGT---------------------><-----CDR2
                                         G  A  S  I  S  S  S  K  W  W  T  W  V  R  Q  P  P  G  K  G  L  E  W  I  G  D  I  Y  H  
                    Query_1558   11   CTGGTGCCTCCATCAGCAGTAGTAAATGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGATATCTATCATA  100
V  95.0% (211/222)  IGHV4-4*02   74   ......G..................C.......G.............................................A..........  163
                                         G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  

                                      -IMGT-----><----------------------------------------------------FR3-IMGT------------------
                                      S  G  S  S  N  Y  S  P  S  L  E  S  R  V  T  I  S  V  D  *  S  K  N  Q  F  S  L  K  L  T  
                    Query_1558   101  GTGGGAGCTCCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACTAGTCCAAGAATCAGTTCTCCCTGAAGCTGACAT  190
V  95.0% (211/222)  IGHV4-4*02   164  ........A.........A..........A..........................A..........C...................GC.  253
                                      S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  

                                      ----------------------------------><-------------CDR3-IMGT------------>                   
                                      S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  G  P  T  V  F  D  Y  W  G  Q  G  T  L  
                    Query_1558   191  CTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCGGCGGGGGACCTACCGTGTTTGACTACTGGGGCCAGGGAACCCTGG  280
V  95.0% (211/222)  IGHV4-4*02   254  ..........................................------------------------------------------------  295
                                      S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                                                  
D  100.0% (6/6)     IGHD3-16*01  18   -----------------------------------------------......-------------------------------------  23
J  100.0% (43/43)   IGHJ4*02     6    --------------------------------------------------------------............................  33

                                                     
                                      V  T  V  S  S  
                    Query_1558   281  TCACCGTCTCCTCAG  295
J  100.0% (43/43)   IGHJ4*02     34   ...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_104694

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           335     4e-94
IGHD3-22*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GTGCCGCCTCC	TATTATTATGACAGT	GATGGGTATGGTCCCTCCTCCTCCA	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGCCGCCTCCTATTATTATGACAGTGATGGGTATGGTCCCTCCTCCTCCAGTATGGACGTC	ASAASYYYDSDGYGPSSSSMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	230	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  G  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_1559   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTTACCTTCAATACCTATGGCATGCACTGGGTCCGCCAGGCTTCAGGCAAGGGACTGG  90
V  93.5% (230/246)  IGHV3-33*03  47   ..................................C.......G..G............................C..........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  E  N  S  
                    Query_1559   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTACTACTTACTATGCAGATTCTGTGAAGGGCCGATTCACCATCTCCAGAGAGAACTCCA  180
V  93.5% (230/246)  IGHV3-33*03  137  .................................A..AA...........C..C.............................C.......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  G  D  T  G  V  Y  F  C  A  S  A  A  S  Y  Y  Y  D  
                    Query_1559   181  AGAACACGCTGTACCTGCAAATGAACAGCCTGAGAGCCGGGGACACGGGTGTATATTTCTGTGCGAGTGCCGCCTCCTATTATTATGACA  270
V  93.5% (230/246)  IGHV3-33*03  227  .............T.........................A........C...G....A........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  86.7% (13/15)    IGHD3-22*01  2    -----------------------------------------------------------------------------.....C.....T.  14

                                      -CDR3-IMGT--------------------------->                                 
                                      S  D  G  Y  G  P  S  S  S  S  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1559   271  GTGATGGGTATGGTCCCTCCTCCTCCAGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  86.7% (13/15)    IGHD3-22*01  15   ..---------------------------------------------------------------------  16
J  100.0% (44/44)   IGHJ6*02     19   ---------------------------............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_351259

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           336     1e-94
IGHD6-19*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTCCCGCGGG	GCAGTGGCTGG	C	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTCCCGCGGGGCAGTGGCTGGCCTTTGACTAC	ARAPAGQWLAFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  G  F  S  S  Y  H  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_1560   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGGTTTCAGTAGCTACCACATGCACTGGGTCCGCCAGGTTCCAGGCAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-30*03  47   ...................................ACC...........TGG....................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  F  D  G  R  N  K  H  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1560   91   AGTGGGTGGCACTTATATCATTTGATGGAAGAAATAAACACTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCTAGAGACAATTCCA  180
V  93.2% (232/249)  IGHV3-30*03  137  ...........G.........A.........T......T......C..............................C.............  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  G  D  D  T  A  V  F  Y  C  A  R  A  P  A  G  Q  W  L  
                    Query_1560   181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGAGGTGACGACACGGCTGTGTTTTACTGTGCGAGAGCTCCCGCGGGGCAGTGGCTGG  270
V  93.2% (232/249)  IGHV3-30*03  227  .......G............................C...G.............A..............---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-19*01  8    -------------------------------------------------------------------------------...........  18

                                      ---------->                                  
                                      A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1560   271  CCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (44/44)   IGHJ4*02     5    -............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_189205

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGTCCCGACTGAACTACGGCATGGACGTC	ARLMSRLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  S  N  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_1561   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATCAGCAATTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G.........T.G................A............................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1561   91   TGGATTGAGTACATCTATTACAGGGGGAGTCCCAATAACGACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G...T...........T.....CA....CT..A..................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_1561   181  CAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTAATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  .............A.C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  94.0% (47/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  G  G  Q  G  T  T  V  T  V  S  S 
                    Query_1561   271  GACGTCGGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  309
J  94.0% (47/50)    IGHJ6*02     24   ......T............................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_189204

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            339     2e-95
IGHD4-17*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAC	CTACGGTGACTAC	CTGGCAGGCCCCTGTAAGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACCTACGGTGACTACCTGGCAGGCCCCTGTAAGCTTGACTAC	ARTYGDYLAGPCKLDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  F  R  N  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1562   1    GGTCCCTGAGACTCTCCTGTGTAGGTTCTGGATTCACCTTTAGAAATTTTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  93.9% (232/247)  IGHV3-7*03   47   .....................C..CC.................T.GC.A....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  D  K  D  G  S  E  I  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1562   91   AGTGGGTGGCCAACATAGACAAAGATGGAAGTGAGATATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.9% (232/247)  IGHV3-7*03   137  .................A.GC...............A.....................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  S  L  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  T  Y  G  D  Y  L  A  
                    Query_1562   181  GGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTGTATTACTGTGCGAGGACCTACGGTGACTACCTGGCAG  270
V  93.9% (232/247)  IGHV3-7*03   227  A...........A...........................G..........................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (13/13)   IGHD4-17*01  4    ----------------------------------------------------------------------.............-------  16

                                      T------------------>                                  
                                      G  P  C  K  L  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_1562   271  GCCCCTGTAAGCTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  324
J  97.6% (41/42)    IGHJ4*02     7    ------------....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_187236

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            302     3e-84
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ5*01                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAGGGGG	AGCAGTGGCTGGTAC	ACGGGCCCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGGGGGAGCAGTGGCTGGTACACGGGCCCCTTCGACTCC	ARVRGSSGWYTGPFDS	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	56	27	22	5	0	81.5
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	221	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  A  G  S  I  T  S  N  N  W  W  S  W  V  R  Q  P  P  G  R  G  
                    Query_1563   1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTGCTGGCTCCATCACTAGTAATAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAGGGGGC  90
V  88.8% (221/249)  IGHV4-4*02   47   ..A.....TCC...A...............G...........GC....G...C...............................A.....  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  S  G  S  A  N  Y  Q  P  S  L  W  S  R  V  T  I  S  L  D  R  S  
                    Query_1563   91   TGGAGTGGATTGGAGAAATCTATCATAGTGGGAGCGCCAACTATCAGCCGTCCCTCTGGAGCCGAGTCACCATATCACTAGACAGGTCCA  180
V  88.8% (221/249)  IGHV4-4*02   137  .............G.....................A.......CA.C.........AA...T...............G......A.....  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  M  D  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  G  S  S  G  W  
                    Query_1563   181  AGAACCAGTTCTCCATGGACTTGAACTCAGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGAGAGTAAGGGGGAGCAGTGGCTGGT  270
V  88.8% (221/249)  IGHV4-4*02   227  ..............C..A.GC...G...T.......................G................---------------------  295
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD6-19*01  7    -----------------------------------------------------------------------------.............  19

                                      T------------------>                                  
                                      Y  T  G  P  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_1563   271  ACACGGGCCCCTTCGACTCCTGGGGCCAGGGAATCCTGGTCACCGTCTCGTCAG  324
D  100.0% (15/15)   IGHD6-19*01  20   ..----------------------------------------------------  21
J  93.0% (40/43)    IGHJ5*01     9    -----------.................A....C...............C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_187237

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            333     1e-93
IGHD3-3*02                                                                                            12.2    31   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTT	GCATTT	CGATCTCCCACGAGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGCATTTCGATCTCCCACGAGGCATGGACGTC	ARLHFDLPRGMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  T  Y  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_1564  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGGGGCTCCATCACCAGTACTTACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  93.5% (229/245)  IGHV4-4*01  49   ..................G....C.....T..........G.....G.A.........G...........................G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  S  G  S  P  H  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_1564  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCCCCCACTACAGTCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  93.5% (229/245)  IGHV4-4*01  139  .................................A..A......AC.............................................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                      N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  W  C  A  R  L  H  F  D  L  P  R  G 
                    Query_1564  181  AACCAGTTCTCCCTGAAGTTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTGGTGTGCGAGGTTGCATTTCGATCTCCCACGAGGC  270
V  93.5% (229/245)  IGHV4-4*01  229  ..................C....C.............................T..C........-------------------------  293
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  100.0% (6/6)     IGHD3-3*02  7    --------------------------------------------------------------------......----------------  12

                                     -------->                                 
                                      M  D  V  W  G  Q  G  T  T  A  I  V  S  S 
                    Query_1564  271  ATGGACGTCTGGGGCCAAGGGACCACGGCCATCGTCTCCTCA  312
J  95.2% (40/42)    IGHJ6*02    21   ............................T..C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_187234

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD6-13*01                                                                                           18.0    0.55  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CACG	AGCAGCTGG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACACGAGCAGCTGGATTGACTAC	ARDTSSWIDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1565   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ...............................G...........G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  T  G  S  T  N  Y  N  P  S  L  K  S  Q  F  T  I  S  V  D  T  S  K  N 
                    Query_1565   91   TGGATTGGGTATATCTTTTACACTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCAATTCACCATATCAGTAGACACGTCGAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  ................A.....G...................................G.G......................C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  S  S  W  I  D  Y  W 
                    Query_1565   181  CAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACACGAGCAGCTGGATTGACTACTGG  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-13*01  10   ---------------------------------------------------------------------.........------------  18
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------...........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_1565   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (42/42)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_187235

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           307     1e-85
IGHD5-12*01                                                                                           12.2    30   
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCC	GTGGAT	TAAGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCGTGGATTAAGCTTC	ATRGLSF	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	221	25	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  D  M  N  W  L  R  Q  A  P  G  K  G  P  
                    Query_1566   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACTTTCAGTAATTACGACATGAACTGGCTCCGCCAGGCTCCTGGGAAGGGGCCGG  90
V  89.8% (221/246)  IGHV3-48*03  47   .....................C...............C.......G...T..A.........G.............A..........T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  D  I  T  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_1566   91   AGTGGGTCTCATCCATTAGTAGTCGTGGAGATATCACATACTACGCGGACTCAGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  89.8% (221/246)  IGHV3-48*03  137  .......T....A..........A....TAG..C..T.........A.....T...A................................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      E  N  S  L  S  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  T  R  G  L  S  F  W  G  
                    Query_1566   181  AGAACTCACTGTCCCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTCTTTATTACTGTGCGACCCGTGGATTAAGCTTCTGGGGCC  270
V  89.8% (221/246)  IGHV3-48*03  227  ............AT......................C...G.........G...............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD5-12*01  1    ---------------------------------------------------------------------......---------------  6
J  94.3% (33/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  A  Q  V  T  V  S  S  
                    Query_1566   271  AGGGAGCCCAGGTCACCGTCTCCTCAG  297
J  94.3% (33/35)    IGHJ4*02     22   .....A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_187232

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD6-19*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAGGGAGT	AGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCC	ARAGSSGWLDS	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  T  S  D  Y  W  S  W  I  R  K  P  P  G  K  G  L  E  
                    Query_1567   4    CCCTGAGACTCTCCTGTACTGTCTCTGGGGGCTCCATAACTAGTGACTACTGGAGCTGGATCCGGAAGCCCCCTGGGAAGGGACTGGAGT  93
V  90.9% (221/243)  IGHV4-59*01  50   .....TCC...A....C...........T........C.G....T....................C.......A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  D  Y  N  S  S  L  K  S  R  V  T  I  S  F  D  R  S  K  N  
                    Query_1567   94   GGATTGGATATATCTATTACAGTGGGAGCACCGACTACAATTCCTCCCTCAAGAGTCGAGTCACCATATCATTTGACAGGTCCAAGAACC  183
V  90.9% (221/243)  IGHV4-59*01  140  .......G........................A.......CC.............................G.A....C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  S  S  G  W  L  D  S  
                    Query_1567   184  AGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCCT  273
V  90.9% (221/243)  IGHV4-59*01  230  ..............C....C..........................G............A...---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (9/9)     IGHD6-19*01  10   -----------------------------------------------------------------------.........----------  18
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------......A..  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1567   274  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (41/42)    IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_187233

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           322     2e-90
IGHD2-15*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGCCCGCTGCCC	GTGGTGGGTGCTA	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATCAGCCCGCTGCCCGTGGTGGGTGCTATGACTAC	VRDQPAARGGCYDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  L  R  S  H  W  M  H  W  V  R  Q  D  P  G  K  G  L  
                    Query_1568   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCCTCAGAAGCCACTGGATGCACTGGGTCCGCCAAGATCCAGGGAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-74*01  47   .....................C................T....T...T........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  A  R  I  N  F  D  G  S  S  T  S  Y  V  D  S  V  K  G  R  F  N  I  S  R  D  N  A  
                    Query_1568   91   TATGGGTCGCACGTATTAATTTTGATGGGAGTAGTACAAGTTATGTGGACTCCGTCAAGGGCCGATTCAACATCTCCAGAGACAACGCCA  180
V  91.2% (228/250)  IGHV3-74*01  137  .G......T...........AG............C.....C..C.C.........G.............C....................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  G  V  Y  Y  C  V  R  D  Q  P  A  A  R  G  
                    Query_1568   181  AGAGCACATTGTATCTGCAAATGAATAGTCTGAGAGTCGAGGACACGGGTGTGTATTACTGTGTAAGAGATCAGCCCGCTGCCCGTGGTG  270
V  91.2% (228/250)  IGHV3-74*01  227  ...A...GC................C..........C...........C..............C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.6% (11/13)    IGHD2-15*01  15   ------------------------------------------------------------------------------------.....A  20

                                      ------------->                                  
                                      G  C  Y  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_1568   271  GGTGCTATGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  318
D  84.6% (11/13)    IGHD2-15*01  21   .C.....-----------------------------------------  27
J  97.6% (40/41)    IGHJ4*02     8    -------...................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_62186

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         405     4e-115
IGHD2-21*01                                                                                           14.1    9.5   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGACTGCAT	TGGTGGCAATTGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGCATTGGTGGCAATTGTTATTTTGACTAC	ARVDCIGGNCYFDY	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	103	11	0	90.4
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	277	18	0	93.9


Alignments

                                        <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                         Q  V  Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  T  A  S  G  F  T  F  S 
                    Query_1569     1    CAGGTTCAGCTGGTGCAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGT  90
V  93.9% (277/295)  IGHV3-30-3*01  1    .....G.........G..................................................G.......................  90
                                         Q  V  Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S 

                                        GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                         N  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D  G  S  S  K  Y  Y 
                    Query_1569     91   AACTATGCTATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATTTCATATGATGGAAGCAGTAAATATTAC  180
V  93.9% (277/295)  IGHV3-30-3*01  91   .G.........G..................................................A................A......C...  180
                                         S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y 

                                        -----------------------------------------------FR3-IMGT-----------------------------------
                                         A  D  S  L  K  G  R  F  T  I  S  R  D  N  S  Q  N  T  L  F  L  Q  M  N  S  L  G  T  E  D 
                    Query_1569     181  GCAGACTCCCTGAAGGGCCGATTCACCATCTCCAGAGACAACTCTCAGAACACACTGTTTCTGCAAATGAATAGCCTGGGAACTGAGGAC  270
V  93.9% (277/295)  IGHV3-30-3*01  181  .........G...............................T..CA.......G....A............C......A..G........  270
                                         A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D 

                                        -----------------><----------------CDR3-IMGT--------------->                              
                                         T  A  V  Y  Y  C  A  R  V  D  C  I  G  G  N  C  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_1569     271  ACGGCTGTCTATTACTGTGCGAGAGTGGACTGCATTGGTGGCAATTGTTATTTTGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCC  360
V  93.9% (277/295)  IGHV3-30-3*01  271  ........G................-----------------------------------------------------------------  295
                                         T  A  V  Y  Y  C  A  R                                                                   
D  81.2% (13/16)    IGHD2-21*01    10   -----------------------------------......TG....C...---------------------------------------  25
J  97.7% (42/43)    IGHJ4*02       6    ---------------------------------------------------.......................C...............  44

                                            
                                         S  
                    Query_1569     361  TCAG  364
J  97.7% (42/43)    IGHJ4*02       45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_187231

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           360     1e-101
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGGTCC	ATTACTATGATAGTA	CTTCTTACTACGGGAGTCGGTTCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGGTCCATTACTATGATAGTACTTCTTACTACGGGAGTCGGTTCCACTTTGACTAC	ARVVHYYDSTSYYGSRFHFDY	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G 
                    Query_1570   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGA  90
V  96.4% (239/248)  IGHV4-61*01  49   .........................................C........................A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_1570   91   CTGGAGTGGATTGGGTACATCTATTACAGAGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTGGACACGTCC  180
V  96.4% (239/248)  IGHV4-61*01  139  .................T...........T....G.......................................A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  V  H  Y  Y  D  S 
                    Query_1570   181  AAGAACCAGTTCTCCCTGCAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGGTGGTCCATTACTATGATAGT  270
V  96.4% (239/248)  IGHV4-61*01  229  ..................A..C..............................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (15/15)   IGHD3-22*01  3    ----------------------------------------------------------------------------..............  16

                                      CDR3-IMGT-------------------------->                                  
                                       T  S  Y  Y  G  S  R  F  H  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_1570   271  ACTTCTTACTACGGGAGTCGGTTCCACTTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  340
D  100.0% (15/15)   IGHD3-22*01  17   .---------------------------------------------------------------------  17
J  97.8% (44/45)    IGHJ4*02     4    -------------------------.......................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_51314

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD6-19*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TAGATTTTGGCGAC	AGCAGGGGCTGGTAC	TCTTGG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTAGATTTTGGCGACAGCAGGGGCTGGTACTCTTGGATGGACGTC	AKVDFGDSRGWYSWMDV	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	21	3	6	70
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	235	14	6	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  G  W  V  R  Q  A  P  E  K  G  L  
                    Query_1571   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTACGCCATGGGCTGGGTCCGCCAGGCTCCAGAGAAGGGGCTGG  90
V  92.2% (235/255)  IGHV3-23*01  47   .............................................G...T......A.....................G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  S  G  I  N  G  S  D  H  G  G  G  S  Y  Y  A  E  S  V  K  G  R  F  I  I  S  R  D  
                    Query_1571   91   AGTGGGTCTCAGGTATTAATGGTAGTGATCATGGTGGTGGCTCATACTATGCAGAGTCCGTGAAGGGCCGGTTCATCATCTCCAGAGACA  180
V  92.2% (235/255)  IGHV3-23*01  137  ............C.....G........------.....A..A.......C.....C...................C..............  220
                                      E  W  V  S  A  I  S  G  S        G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      N  S  K  N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  R  Y  Y  C  A  K  V  D  F  G  D  
                    Query_1571   181  ATTCCAAGAACACGGTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCAGATATTACTGTGCGAAAGTAGATTTTGGCGACA  270
V  92.2% (235/255)  IGHV3-23*01  221  ..............C.........................................GT.................---------------  295
                                      N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                 
D  93.3% (14/15)    IGHD6-19*01  7    -----------------------------------------------------------------------------------------.  7

                                      DR3-IMGT-------------------->                                 
                                      S  R  G  W  Y  S  W  M  D  V  W  G  Q  G  T  T  A  T  V  S  S 
                    Query_1571   271  GCAGGGGCTGGTACTCTTGGATGGACGTCTGGGGCCAAGGGACCACGGCCACCGTTTCCTCA  332
D  93.3% (14/15)    IGHD6-19*01  8    ....T.........------------------------------------------------  21
J  95.2% (40/42)    IGHJ6*02     21   --------------------............................T......C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_51316

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           378     3e-107
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              48.8    8e-10 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	289	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	67	7	0	90.5
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	106	8	0	93
CDR3-IMGT (germline)	289	295	7	6	1	0	85.7
Total	N/A	N/A	294	268	26	0	91.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  *  R  F  T  
                    Query_1572   2    AGATGCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGATTTGGATAAAGATTTACCA  91
V  91.2% (268/294)  IGHV5-51*01  2    ..G.....................C........A.....................G.........A....T.C......C..C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  H  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  
                    Query_1572   92   ATCACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATA  181
V  91.2% (268/294)  IGHV5-51*01  92   GCT....................................................G.......A.....G.......G....C.....C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_1572   182  GCCCGTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAGCCTGAAGGCCTCGGACT  271
V  91.2% (268/294)  IGHV5-51*01  182  ...................G........C...................................G........................A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------CDR3-IMGT----------->                             
                                      S  A  L  Y  F  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  R  T  M  V  I  V  S
                    Query_1572   272  CCGCCTTGTATTTTTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAAGGACAATGGTTATCGTCTC  350
V  91.2% (268/294)  IGHV5-51*01  272  .....A......AC.....G....-------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                         
D  100.0% (6/6)     IGHD2-2*01   16   --------------------------------......-----------------------------------------  21
J  87.5% (35/40)    IGHJ3*02     6    ---------------------------------------..........C.....C...G..........C.C......  45


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_51311

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           297     7e-83
IGHD6-25*01                                                                                           10.3    114  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GCCGGGATT	CAGCG	AAATCAGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGCCGGGATTCAGCGAAATCAGGCTAC	ATGRDSAKSGY	234	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	20	4	0	83.3
FR2-IMGT	48	98	51	47	4	0	92.2
CDR2-IMGT	99	119	21	16	5	0	76.2
FR3-IMGT	120	233	114	109	5	0	95.6
CDR3-IMGT (germline)	234	240	7	6	1	0	85.7
Total	N/A	N/A	228	209	19	0	91.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  V  S  S  Y  H  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I  
                    Query_1573   13   GTGCAGCCTCTGGGTTCACTGTCAGCAGCTACCACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTGAGTGGGTCTCAACTATCT  102
V  91.7% (209/228)  IGHV3-53*01  65   ...................C.....T...A..T......G..............................G............GT...T.  154
                                         A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  

                                      --CDR2-IMGT-----><----------------------------------------------------FR3-IMGT------------
                                      Y  I  D  A  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  K  N  T  L  Y  L  Q  
                    Query_1573   103  ATATCGATGCTACCACATACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACTATTCCAAGAACACACTGTATCTTCAGA  192
V  91.7% (209/228)  IGHV3-53*01  155  ...G..G..G..G............A....................................A.............G...........A.  244
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  

                                      ----------------------------------------><-----------CDR3-IMGT----------->                
                                      M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  T  G  R  D  S  A  K  S  G  Y  W  G  Q  G  T  
                    Query_1573   193  TGAACACCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGACAGGCCGGGATTCAGCGAAATCAGGCTACTGGGGCCAGGGAACCC  282
V  91.7% (209/228)  IGHV3-53*01  245  ......G......................................G..------------------------------------------  292
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                            
D  100.0% (5/5)     IGHD6-25*01  9    ---------------------------------------------------------.....----------------------------  13
J  100.0% (38/38)   IGHJ4*02     11   ----------------------------------------------------------------------....................  30

                                                        
                                      L  V  T  V  S  S  
                    Query_1573   283  TGGTCACCGTCTCCTCAG  300
J  100.0% (38/38)   IGHJ4*02     31   ..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_187238

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            355     3e-100
IGHD5-12*01                                                                                           12.2    31    
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGGG	GTGCCTACG	TCCGGGCGTTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGGGGTGCCTACGTCCGGGCGTTTTTTGACTAC	ARRGAYVRAFFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  Q  G  L  
                    Query_1574   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGCAGGGACTGG  90
V  96.0% (237/247)  IGHV3-7*01   47   .............................................G..................................A....G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  Q  T  Y  S  L  D  S  V  K  G  R  F  T  F  S  R  D  N  A  
                    Query_1574   91   AGTGGGTGGCCAACATAAAGGAAGATGGGAGTCAGACATACTCTCTGGACTCTGTGAAGGGCCGATTCACCTTCTCCAGAGACAACGCCA  180
V  96.0% (237/247)  IGHV3-7*01   137  ....................C.......A...G...A.....A.G..........................A..................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  R  G  A  Y  V  R  A  
                    Query_1574   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGAGGGGTGCCTACGTCCGGGCGT  270
V  96.0% (237/247)  IGHV3-7*01   227  ...................................................................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  88.9% (8/9)      IGHD5-12*01  10   ------------------------------------------------------------------------...G.....---------  18

                                      ---------->                                  
                                      F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1574   271  TTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (43/43)   IGHJ4*02     6    --...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_187239

Length=490
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           177     1e-46
IGHD3-3*01                                                                                            14.1    12   
IGHJ6*03                                                                                              16.1    6.9  


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ6*03	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGCGA	ATGGGGTCCGCT	TTTTTGG	CGGGTTCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATGGGGTCCGCTTTTTTGGCGGGTTCTCCCTACTACA	ANGVRFFGGFSLL	244	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	32	19	0	62.7
CDR2-IMGT	109	129	21	12	9	0	57.1
FR3-IMGT	130	243	114	81	33	0	71.1
CDR3-IMGT (germline)	244	247	4	4	0	0	100
Total	N/A	N/A	247	180	67	0	72.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  N  N  Y  *  C  C  W  L  H  P  P  P  R  E  L 
                    Query_1575   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTACTCCATCAGCAGTAATAACTACTAGTGCTGCTGGCTCCACCCCCCCCCAAGGGAACTG  90
V  72.9% (180/247)  IGHV4-39*01  49   ..............................GG..............G..GT.....C..GG.....A...G..AG......G..A.GGG.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       Q  G  R  V  A  I  S  Y  S  R  S  T  S  Y  Y  T  P  L  L  R  S  L  T  I  I  L  E  N  S  T 
                    Query_1575   91   CAGGGGAGGGTTGCCATCTCTTATTCTAGGAGCACCTCCTACTACACGCCCCTCCTCAGGAGTCTAACCATCATATTAGAAAACTCCACG  180
V  72.9% (180/247)  IGHV4-39*01  139  .T..A.T..A...GG.GTATC....A...TG.G.G.A.........AC..GTC.....A.....G.GT..C.....CC.T.G..A.GT.C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><---------------CDR3-IMGT--
                                       N  Q  Q  F  L  K  M  M  S  S  A  T  A  A  E  T  A  V  Y  Y  G  A  N  G  V  R  F  F  G  G 
                    Query_1575   181  AACCAGCAGTTCTTGAAGATGATGAGCTCTGCGACCGCCGCAGAGACGGCGGTTTATTACGGGGCGAATGGGGTCCGCTTTTTTGGCGGG  270
V  72.9% (180/247)  IGHV4-39*01  229  ..GA.C.......CCCT..A.C.........T............C.....T..G......T.T....-----------------------  295
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   10   -------------------------------------------------------------------------------.......----  16

                                      ------------->
                                       F  S  L  L   
                    Query_1575   271  TTCTCCCTACTACA  284
J  100.0% (8/8)     IGHJ6*03     14   ------........  21


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 48598704


Query= Query_50043

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            347     7e-98
IGHD3-16*01                                                                                           14.1    8.4  
IGHJ5*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	GGC	GTATAATGAT	AAGTCCCCGAATCATA	GGTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGGCGTATAATGATAAGTCCCCGAATCATAGGTCCGACTCC	AREAYNDKSPNHRSDS	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	248	8	7	1	0	87.5
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  G  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_1576   1    ACCCTGTCCCTCACCTGCGCAGTCTCTGGTGCCTCCATCAGCGGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  94.8% (235/248)  IGHV4-4*02   49   ....................T..........G..........A...............................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  V  G  S  T  N  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  R  S  R 
                    Query_1576   91   GAGTGGATTGGGGAAATCTATCATGTTGGGAGCACCAACTACAACCCGTCCCTCAAGGGTCGAGTCACCATATCAGTAGACAGGTCCAGG  180
V  94.8% (235/248)  IGHV4-4*02   139  ........................AG...............................A........................A.....A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  N  D  K  S  P 
                    Query_1576   181  AACCAGTTCTCCCTCAATCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGGGAGGCGTATAATGATAAGTCCCCG  270
V  94.8% (235/248)  IGHV4-4*02   229  ..............G..G....G...........................G..............A..----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  90.0% (9/10)     IGHD3-16*01  1    -----------------------------------------------------------------------....T.....---------  10

                                      ----------------->                                  
                                       N  H  R  S  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1576   271  AATCATAGGTCCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  95.6% (43/45)    IGHJ5*01     7    -------...T...............A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_50042

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            319     2e-89
IGHD1-26*01                                                                                           12.2    34   
IGHJ3*02                                                                                              58.4    1e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GCTACT	TGCGGTTTTCGGGCCGGCTTCTCTAT	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTACTTGCGGTTTTCGGGCCGGCTTCTCTATATGCTTTGGATATC	ARLLAVFGPASLYALDI	264	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	77	27	24	3	0	88.9
FR2-IMGT	78	128	51	48	3	0	94.1
CDR2-IMGT	129	149	21	17	4	0	81
FR3-IMGT	150	263	114	97	17	0	85.1
CDR3-IMGT (germline)	264	268	5	5	0	0	100
Total	N/A	N/A	268	236	32	0	88.1


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  L  P  C  T  V  S  G  G  S  I  S  S  N  N  W  W  R  W  V  
                    Query_1577   1    CAGGACTGGTGAAGCCCTCGGGGACCCTATCACTCCCCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAATAATTGGTGGAGATGGGTCC  90
V  88.1% (236/268)  IGHV4-4*02   26   ................T...........G..C...A.....G......................C....G...C........T.......  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  I  G  Q  I  H  H  N  G  A  T  T  Y  N  P  S  L  E  S  R  V  
                    Query_1577   91   GCCAGCCCCCAGGGAAAGGGCTGGAGTGGATTGGGCAAATCCATCATAATGGGGCCACCACCTACAACCCCTCCCTTGAGAGTCGCGTCC  180
V  88.1% (236/268)  IGHV4-4*02   116  ................G..................G.....T......G....AG.....A.........G.....CA.......A...A  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      P  L  S  L  D  K  S  K  D  H  F  S  L  R  A  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  
                    Query_1577   181  CCTTATCATTGGACAAGTCCAAGGACCACTTCTCCCTGAGGGCGACCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGGC  270
V  88.1% (236/268)  IGHV4-4*02   206  ..A.....G.A............A....G..........A.CT..G...............G...........G..............--  293
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A     
D  100.0% (6/6)     IGHD1-26*01  13   ----------------------------------------------------------------------------------------..  14

                                      --------------CDR3-IMGT-------------------->                                  
                                      L  L  A  V  F  G  P  A  S  L  Y  A  L  D  I  W  G  Q  A  T  M  V  I  V  S  S  
                    Query_1577   271  TACTTGCGGTTTTCGGGCCGGCTTCTCTATATGCTTTGGATATCTGGGGCCAGGCTACAATGGTCATCGTCTCCTCAG  348
D  100.0% (6/6)     IGHD1-26*01  15   ....--------------------------------------------------------------------------  18
J  87.5% (42/48)    IGHJ3*02     3    ------------------------------.......T..............A.GG..........C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_50041

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           371     7e-105
IGHD6-19*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGTCGTCCGCCG	GTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGTCGTCCGCCGGTGGCTGGCACTTTGACAAT	ARPSSAGGWHFDN	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	263	26	0	91


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_1578   1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCAGTTA  90
V  91.0% (263/289)  IGHV5-51*03  6    .........................G.............G.........................G.........C.GC..T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  D  I  R  Y  S  P
                    Query_1578   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGATATTAGATATAGTCC  180
V  91.0% (263/289)  IGHV5-51*03  96   C.......G..................................................AT...GG...........CC.....C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  G
                    Query_1578   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACCCCGG  270
V  91.0% (263/289)  IGHV5-51*03  186  .............................C..A.AA........G........................................A...C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  P  S  S  A  G  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1578   271  CATGTATTACTGCGCGAGACCGTCGTCCGCCGGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  91.0% (263/289)  IGHV5-51*03  276  ............T......-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD6-19*01  11   --------------------------------........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_50040

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         322     2e-90
IGHD3-22*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	TCACCCAC	TGATAGTA	ATAATAT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGATCACCCACTGATAGTAATAATATC	ARSPTDSNNI	241	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	226	20	0	91.9


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  V  G  S  G  Y  Y  W  G  W  I  R  Q  S  P  G  K  G  L 
                    Query_1579     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCGTCGGCAGTGGTTATTACTGGGGCTGGATCCGGCAGTCCCCAGGGAAGGGGCTG  90
V  91.9% (226/246)  IGHV4-38-2*01  49   ....................................A..A..........C.....................C.................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  A  T  I  H  H  S  G  S  T  H  Y  N  P  S  L  K  S  R  V  L  I  S  I  D  T  S  M 
                    Query_1579     91   GAGTGGATTGCGACTATCCATCATAGTGGCAGCACCCACTACAACCCGTCCCTCAAGAGTCGAGTTCTTATATCAATAGACACGTCCATG  180
V  91.9% (226/246)  IGHV4-38-2*01  139  ..........G..G....T..........G......T............................CACC......G............A.  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------CDR3-IMGT--------->
                                         N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  S  P  T  D  S  N  N  I 
                    Query_1579     181  AACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCATTTATTACTGTGCAAGATCACCCACTGATAGTAATAATATC  270
V  91.9% (226/246)  IGHV4-38-2*01  229  ................A......C........................G.G...........G...------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD3-22*01    10   --------------------------------------------------------------------------........--------  17
J  97.1% (34/35)    IGHJ4*02       14   -----------------------------------------------------------------------------------------.  14

                                                                          
                                         W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_1579     271  TGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  304
J  97.1% (34/35)    IGHJ4*02       15   ................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_50046

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD3-16*01                                                                                           21.8    0.039
IGHJ2*01                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCT	GGGAGTTATGC	CGAT	TTCAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTGGGAGTTATGCCGATTTCAATATC	AAGSYADFNI	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  R  S  Y  D  M  I  W  V  R  Q  A  P  G  K  G  L  
                    Query_1580   1    GGTCCCTGAGACTCTCCTGTGCAGTTTCCGGATTCACCTTTAGAAGCTATGACATGATTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (228/245)  IGHV3-23*01  47   ........................CC..T..............C.......C.....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  A  S  A  I  S  G  N  G  G  S  S  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  S  
                    Query_1580   91   AGTGGGCCTCAGCTATTAGTGGAAATGGTGGTAGTTCATACTACGCAGACTCCGTGAAGGGCCGGTTCATCATCTCCAGAGACAATTCCA  180
V  93.1% (228/245)  IGHV3-23*01  137  ......T...............T.G.........CA.................................C....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  I  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  A  G  S  Y  A  D  F  N  
                    Query_1580   181  AGAACATTCTGTATTTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTATATTACTGTGCGGCTGGGAGTTATGCCGATTTCAATA  270
V  93.1% (228/245)  IGHV3-23*01  227  ......CG......C.....................C............................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD3-16*01  20   --------------------------------------------------------------------...........-----------  30
J  88.4% (38/43)    IGHJ2*01     11   -----------------------------------------------------------------------------------...G..C  17

                                      ->                                  
                                      I  W  G  R  G  T  L  V  T  V  S  S  
                    Query_1580   271  TCTGGGGCCGGGGCACGTTGGTCACTGTCTCCTCAG  306
J  88.4% (38/43)    IGHJ2*01     18   ..........T.....CC..................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_50045

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            388     5e-110
IGHD6-19*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	N/A	CAGTGGCTGGT	TAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGCAGTGGCTGGTTAATTGACTAC	AHSSGWLIDY	263	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	110	4	0	96.5
CDR3-IMGT (germline)	263	270	8	8	0	0	100
Total	N/A	N/A	270	259	11	0	95.9


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  T  A  V  G  V  H  W  I  R
                    Query_1581   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTACTGCAGTGGGTGTACACTGGATCCG  90
V  95.9% (259/270)  IGHV2-5*01   30   .................................................................G..G.........GGG.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  L  Y  W  N  D  D  N  H  Y  S  P  S  L  K  S  R  L  T
                    Query_1581   91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCCTTTATTGGAATGATGATAACCACTACAGCCCATCTCTGAAGAGCAGGCTTAC  180
V  95.9% (259/270)  IGHV2-5*01   120  .....................................A...................G.G...........................C..  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        V  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  V  D  P  V  D  T  A  T  Y  Y  C  A  H  S
                    Query_1581   181  CGTCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACGTGGACCCTGTGGACACAGCCACATATTACTGTGCACACAG  270
V  95.9% (259/270)  IGHV2-5*01   210  .A...............................................A........................................  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                      ---CDR3-IMGT--------->                                  
                                        S  G  W  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1581   271  CAGTGGCTGGTTAATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  326
D  100.0% (11/11)   IGHD6-19*01  9    ...........---------------------------------------------  19
J  100.0% (42/42)   IGHJ4*02     7    --------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_50049

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            339     2e-95
IGHD1-26*01                                                                                           18.0    0.60 
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAACAGTTTGTTGGCACCTG	AGTGGGAGC	CTGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACAGTTTGTTGGCACCTGAGTGGGAGCCTGATGATGCTTTTGATATC	ARVNSLLAPEWEPDDAFDI	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  R  S  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_1582   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGCAGAAGCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.9% (232/247)  IGHV4-4*02   49   ...............................G............T..T.A........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  N  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  K  S  K 
                    Query_1582   91   GAGTGGATTGGGGAGATCTATCATGGTGGGAATACCAACTACAACCCGTCCCTCAAGAGTCGACTTACTATATCAGTAGACAAGTCCAAG  180
V  93.9% (232/247)  IGHV4-4*02   139  ..............A.........A......GC..............................G.C..C.....................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       N  Q  F  S  L  Q  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  S  L  L  A  P  E 
                    Query_1582   181  AACCAATTCTCCCTGCAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGAGAGTTAACAGTTTGTTGGCACCTGAG  270
V  93.9% (232/247)  IGHV4-4*02   229  .....G.........A.......C..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD1-26*01  6    ----------------------------------------------------------------------------------------..  7

                                      MGT----------------------->                                  
                                       W  E  P  D  D  A  F  D  I  W  G  Q  G  T  L  A  I  V  S  S  
                    Query_1582   271  TGGGAGCCTGATGATGCTTTTGATATCTGGGGCCAAGGGACATTGGCCATCGTCTCTTCAG  331
D  100.0% (9/9)     IGHD1-26*01  8    .......------------------------------------------------------  14
J  94.0% (47/50)    IGHJ3*02     1    -----------...............................A...T..C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_50048

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-13*01                                                                                           369     2e-104
IGHJ2*01                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-13*01	N/A	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	CCCCTTTAGGTG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCCCCTTTAGGTGACTGGTACTTCGATCTC	ARAPLGDWYFDL	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	241	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  D  M  H  W  V  R  Q  A  T  G  K  G  L  
                    Query_1583   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTCCTACGACATGCACTGGGTCCGCCAAGCTACAGGAAAAGGTCTGG  90
V  98.0% (241/246)  IGHV3-13*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  D  M  H  W  V  R  Q  A  T  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  A  T  A  G  D  T  Y  Y  P  G  S  V  K  G  R  F  T  I  S  R  E  S  A  K  
                    Query_1583   91   AGTGGGTCTCAGCTATTGCTACTGCTGGTGACACATACTATCCAGGCTCCGTGAAGGGCCGATTCACCATCTCCAGAGAAAGTGCCAAGA  180
V  98.0% (241/246)  IGHV3-13*01  137  ..................G..............................................................A........  226
                                      E  W  V  S  A  I  G  T  A  G  D  T  Y  Y  P  G  S  V  K  G  R  F  T  I  S  R  E  N  A  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  S  L  Y  L  Q  I  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R  A  P  L  G  D  W  Y  F  
                    Query_1583   181  ACTCCTTGTATCTTCAAATAAACAGCCTGAGAGCCGGGGACACGGCTGTGTATTACTGTGCAAGAGCCCCTTTAGGTGACTGGTACTTCG  270
V  98.0% (241/246)  IGHV3-13*01  227  ...................G..............................................------------------------  292
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R                          
J  96.1% (49/51)    IGHJ2*01     3    ------------------------------------------------------------------------------............  14

                                      ---->                                  
                                      D  L  W  G  R  G  A  L  V  T  V  S  S  
                    Query_1583   271  ATCTCTGGGGCCGTGGCGCCCTGGTCACAGTCTCCTCAG  309
J  96.1% (49/51)    IGHJ2*01     15   .................A..........T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_186549

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGATGGA	ATTACTAT	CAAGCGAAGCA	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCGATGGAATTACTATCAAGCGAAGCAATGGTTTTGATATA	TRGDGITIKRSNGFDI	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_1584   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGGCTTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  94.7% (233/246)  IGHV3-53*01  47   ................................................A.......AGC......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_1584   91   AGTGGGTCTCAGTTATTTACAGCGGTGGTACCACATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.7% (233/246)  IGHV3-53*01  137  ...................T..........G........A..................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  L  Y  Y  C  T  R  G  D  G  I  T  I  K  R  
                    Query_1584   181  ACACGCTGTATCTTCAAATGCACAGCCTGAGAGCCGACGACACGGCCCTGTACTACTGTACGAGAGGCGATGGAATTACTATCAAGCGAA  270
V  94.7% (233/246)  IGHV3-53*01  227  ....................A................G.........G....T......G......------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  3    --------------------------------------------------------------------------........--------  10

                                      ---------------->                                  
                                      S  N  G  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1584   271  GCAATGGTTTTGATATATGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  321
J  93.8% (45/48)    IGHJ3*02     3    ---...C.........C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_175040

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD2-21*01                                                                                           18.0    0.59 
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CAGTTTCTGTCTTAGTTTGGACCGGGGAGT	TTGTGGTGG	N/A	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGGGGAGTTTGTGGTGGTTTTGATATG	ARGSFCLSLDRGVCGGFDM	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  N  G  G  S  L  N  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1585   1    ACCCTGTCCCTCACCTGCGCCGTCAATGGTGGGTCCCTCAATGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAG  90
V  92.2% (226/245)  IGHV4-34*01  49   ....................T...T...........T...G..G.......................................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  Q  S  G  T  T  N  Y  K  P  S  L  K  S  R  V  I  T  S  V  D  T  S  K  N 
                    Query_1585   91   TGGATTGGGGAAATCAATCAAAGTGGCACCACCAACTACAAGCCGTCCCTCAAGAGTCGAGTAATCACATCGGTGGACACGTCCAAGAAT  180
V  92.2% (226/245)  IGHV4-34*01  139  ....................T.....A.G............C....................C.C..T...A..A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  F  C  L  S  L  D  R 
                    Query_1585   181  CAGTTCTCCTTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGG  270
V  92.2% (226/245)  IGHV4-34*01  229  .........C.....C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      ----------------------->                               
                                       G  V  C  G  G  F  D  M  W  G  Q  G  T  M  V  T  V  S  
                    Query_1585   271  GGAGTTTGTGGTGGTTTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTT  325
D  100.0% (9/9)     IGHD2-21*01  7    -----.........-----------------------------------------  15
J  97.6% (40/41)    IGHJ3*02     7    --------------.........C...............................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_175041

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD1-7*01                                                                                            12.2    31   
IGHJ3*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD1-7*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCCTTCGAGGA	AACTAC	AA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCTTCGAGGAAACTACAATGATGCTTTTGATGTC	ARLLRGNYNDAFDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	231	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  H  G  E  S  F  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1586   1    ACCCTGTCCCTCACCTGCACTGTCCATGGTGAGTCCTTCAGTGGTTACTACTGGAACTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAA  90
V  95.1% (231/243)  IGHV4-34*01  49   ..................G.....T......G.......................G.................................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_1586   91   TGGATTGGGGAAATCAATCATACTGGAAGCACCAACTACAACCCGTCCCTGAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAA  180
V  95.1% (231/243)  IGHV4-34*01  139  ......................G...........................C......................................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  L  R  G  N  Y  N  D  A 
                    Query_1586   181  CAATTCTCCCTGAACCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTTCTGTGCGAGACTCCTTCGAGGAAACTACAATGATGCT  270
V  95.1% (231/243)  IGHV4-34*01  229  ..G...........G................................G....A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-7*01   12   ---------------------------------------------------------------------------......---------  17
J  98.0% (49/50)    IGHJ3*01     1    -----------------------------------------------------------------------------------.......  7

                                      -------->                                  
                                       F  D  V  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1586   271  TTTGATGTCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  313
J  98.0% (49/50)    IGHJ3*01     8    ........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_175042

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           294     6e-82
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACG	TACGGTGAC	CCTACACTCCCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACGTACGGTGACCCTACACTCCCATACTTTGACTCT	ARTYGDPTLPYFDS	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  M  S  S  G  G  Y  L  W  S  W  I  R  Q  N  P  G  K  G 
                    Query_1587   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCTATGAGCAGTGGCGGCTATCTCTGGAGCTGGATCCGCCAAAACCCAGGGAAGGGC  90
V  87.9% (218/248)  IGHV4-31*03  49   ...............................G...C..C........T..T..CTA..................GC..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  T  S  Y  Y  S  P  S  L  K  R  R  L  T  I  S  V  G  T  S 
                    Query_1587   91   CTGGAGTGGATTGGGAGCATCTATTACAGTGGAACCTCCTACTACAGCCCGTCCCTCAAGAGGCGACTTACAATATCAGTAGGCACTTCT  180
V  87.9% (218/248)  IGHV4-31*03  139  ...............TA...............G.G.A.........A...............T...G....C..........A...G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       E  K  H  F  S  L  K  L  T  S  M  T  A  A  D  T  A  I  Y  F  C  A  R  T  Y  G  D  P  T  L 
                    Query_1587   181  GAGAAGCACTTCTCCCTGAAGCTGACCTCTATGACTGCCGCGGACACGGCCATATATTTTTGTGCGAGGACGTACGGTGACCCTACACTC  270
V  87.9% (218/248)  IGHV4-31*03  229  A....C..G................G....G....................G.G....AC........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (9/9)     IGHD4-17*01  5    ------------------------------------------------------------------------.........---------  13

                                      -------------->                                  
                                       P  Y  F  D  S  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_1587   271  CCATACTTTGACTCTTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  319
J  93.5% (43/46)    IGHJ4*02     3    ---..........AC.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_67158

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD3-16*02                                                                                           39.1    3e-07
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	CCAGGCCGG	TTACGTTTGGGGGCGTTATCGTT	TTTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCCAGGCCGGTTACGTTTGGGGGCGTTATCGTTTTTCCTACTTTGACTCC	ARGQAGYVWGRYRFSYFDS	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1588   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCATTCAGTGATTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGTCTGGAA  90
V  94.7% (232/245)  IGHV4-34*01  49   ...................................C.......G...........G...........................G.....G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  K  H  S  G  S  T  Y  S  N  P  S  L  K  S  R  V  T  T  S  V  D  T  S  K  N 
                    Query_1588   91   TGGATTGGGGAAATCAAGCATAGTGGAAGCACCTACTCCAACCCGTCCCTCAAGAGTCGAGTCACCACATCAGTAGACACGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-34*01  139  .................T...............A...A.............................T......................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  R  L  S  P  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  Q  A  G  Y  V  W  G  R 
                    Query_1588   181  CAGTTCTCCCTGAGGCTGAGTCCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGCGAGGCCAGGCCGGTTACGTTTGGGGGCGT  270
V  94.7% (232/245)  IGHV4-34*01  229  .............A......CT......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  95.7% (22/23)    IGHD3-16*02  10   --------------------------------------------------------------------------.............A..  25

                                      ----------------------->                                  
                                       Y  R  F  S  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1588   271  TATCGTTTTTCCTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.7% (22/23)    IGHD3-16*02  26   .......---------------------------------------------------  32
J  97.9% (46/47)    IGHJ4*02     2    -----------...........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_175044

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           296     2e-82
IGHD3-22*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCT	CTATGATAGTAATGG	CG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATGATAGTAATGGCGACAACTGGTTCGCCCCC	ARGLYDSNGDNWFAP	230	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	47	4	0	92.2
CDR2-IMGT	92	115	24	20	4	0	83.3
FR3-IMGT	116	229	114	108	6	0	94.7
CDR3-IMGT (germline)	230	236	7	7	0	0	100
Total	N/A	N/A	223	206	17	0	92.4


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  R  Y  R  M  T  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  S  I  S  T  G 
                    Query_1589   14   TCTGGATTCACTTTCAGTAGATATAGGATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGTGTGGGTCTCTTCCATTAGTACTGGT  103
V  92.4% (206/223)  IGHV3-21*01  73   ...........C........C.....C....AC...............................A.........A..........G.A..  162
                                       S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       S  S  D  I  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  F  L  Q  M  N 
                    Query_1589   104  AGCAGTGACATATTCTACGCAGACTCGGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTTTCTGCAAATGAAC  193
V  92.4% (206/223)  IGHV3-21*01  163  ..T...T......A............A.................................................A.............  252
                                       S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><-----------------CDR3-IMGT----------------->         
                                       S  L  R  A  D  D  T  A  I  Y  Y  C  A  R  G  L  Y  D  S  N  G  D  N  W  F  A  P  W  G  Q 
                    Query_1589   194  AGCCTGAGAGCCGACGACACGGCTATTTATTACTGTGCGAGAGGCCTCTATGATAGTAATGGCGACAACTGGTTCGCCCCCTGGGGCCAG  283
V  92.4% (206/223)  IGHV3-21*01  253  ..............G.........G.G................-----------------------------------------------  295
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  93.3% (14/15)    IGHD3-22*01  7    -----------------------------------------------...........G...----------------------------  21
J  96.1% (49/51)    IGHJ5*02     1    ----------------------------------------------------------------............A.............  26

                                                               
                                       G  T  L  V  I  V  S  S  
                    Query_1589   284  GGAACCCTGGTCATCGTCTCCTCAG  308
J  96.1% (49/51)    IGHJ5*02     27   .............C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_175046

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD1-26*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCATACGCC	GTGGGAG	GAAGGGATACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATACGCCGTGGGAGGAAGGGATACCCCTTGACTAC	AKDHTPWEEGIPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  L  S  R  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1590   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCATGCTTAGCAGATTTGCCATGAGTTGGGTCCGCCAGGCCCCTGGGAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-23*01  47   ............................T.......CCT.......C.A.........C..............T..A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  D  N  T  Y  Y  A  D  S  L  K  G  Q  F  S  I  S  R  D  S  S  
                    Query_1590   91   AGTGGGTCTCAGGTATCAGCGGAAGTGGTGATAACACATATTATGCAGACTCCTTGAAGGGCCAGTTCTCCATCTCCAGAGACAGTTCCA  180
V  91.2% (228/250)  IGHV3-23*01  137  ............C...T..T..T.......G..G......C..C.........G.........G....A...............A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  H  T  P  W  E  E  
                    Query_1590   181  AGAACACGCTGTATCTGCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCATACGCCGTGGGAGGAAG  270
V  91.2% (228/250)  IGHV3-23*01  227  ......................G...............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD1-26*01  7    -------------------------------------------------------------------------------.......----  13

                                      ---------------->                                  
                                      G  I  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1590   271  GGATACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_175047

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            352     3e-99
IGHD1-26*01                                                                                           12.2    36   
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	N/A	GGGAGC	CGACATAGCACAAATGGGGCATTGACAGGGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGGAGCCGACATAGCACAAATGGGGCATTGACAGGGAATGCTTTTCATATC	AGSRHSTNGALTGNAFHI	273	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	80	30	29	1	0	96.7
FR2-IMGT	81	131	51	47	4	0	92.2
CDR2-IMGT	132	158	27	22	5	0	81.5
FR3-IMGT	159	272	114	101	13	0	88.6
CDR3-IMGT (germline)	273	275	3	3	0	0	100
Total	N/A	N/A	275	250	25	0	90.9


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  V  V  S  G  D  S  V  S  S  N  S  A  A  W  G  W  
                    Query_1591   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGTCGTCTCCGGGGACAGTGTCTCTAGCAACAGCGCTGCTTGGGGCTGGA  90
V  90.9% (250/275)  IGHV6-1*01   26   ..........................................C.A............................T.........AA.....  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  A  R  T  Y  Y  T  S  Q  W  I  H  D  Y  E  D  S  V  K  
                    Query_1591   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGCTAGGACATACTACACGTCCCAGTGGATTCATGATTATGAAGATTCTGTGAAAA  180
V  90.9% (250/275)  IGHV6-1*01   116  ....................................GA.............G....A.....TA.A.........C..TA..........  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  N  V  N  A  D  T  S  K  N  Q  I  S  L  Q  L  T  S  V  T  P  E  D  T  A  M  Y  F  
                    Query_1591   181  GTCGAATAAATGTCAACGCAGACACATCCAAGAACCAGATCTCCCTGCAGTTGACCTCTGTGACTCCCGAGGACACGGCTATGTACTTCT  270
V  90.9% (250/275)  IGHV6-1*01   206  .........CCA.....C....................T...........C...A.........................G....T.A..  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------------------CDR3-IMGT--------------------->                                  
                                      C  A  G  S  R  H  S  T  N  G  A  L  T  G  N  A  F  H  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1591   271  GTGCAGGGAGCCGACATAGCACAAATGGGGCATTGACAGGGAATGCTTTTCATATCTGGGGCCAAGGGACAATGGTCACCGTGTCTTCAG  360
V  90.9% (250/275)  IGHV6-1*01   296  .....-------------------------------------------------------------------------------------  300
                                      C  A                                                                                      
D  100.0% (6/6)     IGHD1-26*01  9    -----......-------------------------------------------------------------------------------  14
J  95.8% (46/48)    IGHJ3*02     3    ------------------------------------------........G...............................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_67153

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           313     1e-87
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGACTAG	TGGAACGAC	TCTTGTGT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGACTAGTGGAACGACTCTTGTGTACTGGTTCGACCCC	ARTSGTTLVYWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	220	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  N  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  Q  L  E 
                    Query_1592   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAATACCTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAACAACTGGAG  90
V  91.7% (220/240)  IGHV4-59*08  49   ..................A.....................G..GT...................................GGG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  T  T  Y  S  P  S  L  K  S  R  V  T  M  S  I  D  T  S  K  N 
                    Query_1592   91   TGGATTGGTTATATCTCTTACAGTGGGAGCACCACTTATAGCCCCTCCCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCCAAGAAC  180
V  91.7% (220/240)  IGHV4-59*08  139  ........G.......A.................AC..C.A...........................A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  T  S  G  T  T  L  V  Y  W 
                    Query_1592   181  CAGTTCTCCCTGAGGCTGACGTCTGTGACCGCCGCAGACACGGCCATTTATTACTGTGCGCGGACTAGTGGAACGACTCTTGTGTACTGG  270
V  91.7% (220/240)  IGHV4-59*08  229  .............A.....GC........................G.G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD1-1*01   9    --------------------------------------------------------------------.........-------------  17
J  95.8% (46/48)    IGHJ5*02     4    -------------------------------------------------------------------------------------.....  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  I  L  V  A  V  S  S  
                    Query_1592   271  TTCGACCCCTGGGGCCAGGGAATCCTGGTCGCCGTCTCCTCAG  313
J  95.8% (46/48)    IGHJ5*02     9    ......................C.......A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_175049

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           364     5e-103
IGHD3-16*01                                                                                           12.2    35    
IGHJ6*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCC	TTGGGG	CGGC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCTTGGGGCGGCCTACGGTTTGGACGTC	ARPLGAAYGLDV	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	261	28	0	90.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  D  S  L  T  I  S  C  Q  V  S  G  Y  I  F  T  H  Y
                    Query_1593   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCGGGGGACTCTCTGACGATCTCCTGTCAGGTTTCTGGATACATCTTCACCCACTA  90
V  90.3% (261/289)  IGHV5-51*03  6    ...............................A..........G.......A..........A...G...........G...T...AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  V  A  G  K  G  L  E  W  M  G  V  I  Y  P  D  D  S  D  A  R  Y  S  P
                    Query_1593   91   TTGGATCGCCTGGGTGCGCCAGGTGGCCGGCAAAGGCCTAGAGTGGATGGGGGTCATCTATCCTGACGACTCTGATGCCAGATACAGCCC  180
V  90.3% (261/289)  IGHV5-51*03  96   C.......G.............A..C....G........G............A............GT.........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  L  V  T  I  S  V  D  K  S  L  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1593   181  GTCCTTTCAAGGCCTGGTCACCATCTCAGTCGACAAGTCCCTCAGTACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  90.3% (261/289)  IGHV5-51*03  186  ......C.......A..............C..........A....C....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  F  C  A  R  P  L  G  A  A  Y  G  L  D  V  W  G  Q  G  T  A  V  V  V  S  S 
                    Query_1593   271  CATTTACTTCTGTGCGAGACCCCTTGGGGCGGCCTACGGTTTGGACGTCTGGGGCCAAGGGACCGCGGTCGTCGTCTCGTCA  352
V  90.3% (261/289)  IGHV5-51*03  276  ...G..T.A..........---------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                
D  100.0% (6/6)     IGHD3-16*01  16   -----------------------......-----------------------------------------------------  21
J  89.8% (44/49)    IGHJ6*02     14   ---------------------------------.......A.......................A.....AC......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_67150

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            352     3e-99
IGHD3-3*01                                                                                            37.2    1e-06
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGCGACGTCCGGGTCC	TACGATTTTTGGAGTGGTT	CTGGTACTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGCGACGTCCGGGTCCTACGATTTTTGGAGTGGTTCTGGTACTCTTGACTAC	AREATSGSYDFWSGSGTLDY	264	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	77	27	23	4	0	85.2
FR2-IMGT	78	128	51	48	3	0	94.1
CDR2-IMGT	129	149	21	20	1	0	95.2
FR3-IMGT	150	263	114	102	12	0	89.5
CDR3-IMGT (germline)	264	271	8	8	0	0	100
Total	N/A	N/A	271	248	23	0	91.5


Alignments

                                     <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                        G  L  V  K  P  S  G  T  L  S  V  T  C  T  V  S  G  G  S  I  S  S  G  T  W  W  S  W  V  
                    Query_1594  1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCGTCACCTGCACTGTCTCTGGTGGCTCCATTAGTAGTGGTACCTGGTGGAGTTGGGTCC  90
V  91.5% (248/271)  IGHV4-4*02  26   ................T...............C........G...................C..C...A...A.................  115
                                        G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                     --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                     R  Q  P  P  G  K  G  L  E  W  I  G  E  I  S  H  S  G  S  T  K  Y  N  T  S  L  R  S  R  V  
                    Query_1594  91   GCCAACCCCCAGGAAAGGGGCTGGAGTGGATTGGAGAAATCTCTCATAGTGGGAGCACCAAGTACAACACGTCCCTCAGGAGTCGAGTCA  180
V  91.5% (248/271)  IGHV4-4*02  116  ....G........G....................G.......A..................C......C.........A...........  205
                                     R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                     ----------------------FR3-IMGT----------------------------------------------------><------
                                     T  I  S  V  D  R  S  N  R  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  
                    Query_1594  181  CCATATCAGTAGACAGGTCGAACAGGCAGTTCTCCCTGAGATTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAG  270
V  91.5% (248/271)  IGHV4-4*02  206  ...............A...C..G.AC.............AGC...G............................................  295
                                     T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  

                                     -------------------CDR3-IMGT------------------------>                                  
                                     E  A  T  S  G  S  Y  D  F  W  S  G  S  G  T  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_1594  271  AGGCGACGTCCGGGTCCTACGATTTTTGGAGTGGTTCTGGTACTCTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  357
V  91.5% (248/271)  IGHV4-4*02  296  .--------------------------------------------------------------------------------------  296
                                                                                                                            
D  100.0% (19/19)   IGHD3-3*01  5    -----------------...................---------------------------------------------------  23
J  97.6% (41/42)    IGHJ4*02    7    ---------------------------------------------.....................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_67156

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            346     2e-97
IGHD6-19*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	CCCGGC	GGTCTAGCAGTGGCTGGTAC	CCCCAATAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGCCCGGCGGTCTAGCAGTGGCTGGTACCCCCAATATTTTGACTTC	ATARRSSSGWYPQYFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  S  W  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1595   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTCTTCTTGGTTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-7*01   47   ........................................T...AGC.A....A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  H  D  G  T  E  K  F  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1595   91   AGTGGGTGGCCAACATAAAGCATGATGGAACTGAGAAATTCTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-7*01   137  ......................A.......G........A..................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  T  A  R  R  S  S  S  G  
                    Query_1595   181  AGAACTCACTCTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTTCTGTGCGACAGCCCGGCGGTCTAGCAGTGGCT  270
V  94.4% (235/249)  IGHV3-7*01   227  ..........G.........................C....................A........G..---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.0% (19/20)    IGHD6-19*01  2    ---------------------------------------------------------------------------...A...........  16

                                      GT-------------------->                                  
                                      W  Y  P  Q  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1595   271  GGTACCCCCAATATTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.0% (19/20)    IGHD6-19*01  17   .....----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_131071

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           332     3e-93
IGHD1-7*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGACGTGG	ACTGGAACT	CAGGGTCCCTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGACGTGGACTGGAACTCAGGGTCCCTATGACTAC	AKGTWTGTQGPYDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	229	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  R  L  
                    Query_1596   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGAGGCTGG  90
V  93.1% (229/246)  IGHV3-53*01  47   ...................................................................................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  S  I  F  S  N  G  N  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_1596   91   AGTGGGTCTCAAGCATTTTTAGTAATGGTAACACATACTACACAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.1% (229/246)  IGHV3-53*01  137  ...........GTT....A...CGG.....G..........G................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  V  Y  L  E  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  G  T  W  T  G  T  Q  G  
                    Query_1596   181  ACACGGTGTATCTCGAAATGAACAGCCTGCGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGGGACGTGGACTGGAACTCAGGGTC  270
V  93.1% (229/246)  IGHV3-53*01  227  .....C.......TC..............A.................G.G.............G..------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (9/9)     IGHD1-7*01   7    --------------------------------------------------------------------------.........-------  15

                                      ---------->                                  
                                      P  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1596   271  CCTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (41/41)   IGHJ4*02     8    ----.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_23168

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           367     6e-104
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1597   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1597   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.2% (242/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_1597   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  97.2% (242/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_1597   271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_131072

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD3-3*01                                                                                            41.1    7e-08 
IGHJ2*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATTGGC	GTATTACGATTTTCGGAGTGGTTA	CCCCTCGG	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATTGGCGTATTACGATTTTCGGAGTGGTTACCCCTCGGGGTACTTCGATCTC	ARGLAYYDFRSGYPSGYFDL	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  W  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_1598   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTGGTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ..............................G.C..................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  T 
                    Query_1598   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGACT  180
V  97.6% (244/250)  IGHV4-31*03  139  .......................................................................................T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  H  C  A  R  G  L  A  Y  Y  D  F 
                    Query_1598   181  AAGAACCAGTTCTCCCTGAAGCTGAGTTCTGTGACTGCCGCGGACACGGCCGTGTATCACTGTGCGAGAGGATTGGCGTATTACGATTTT  270
V  97.6% (244/250)  IGHV4-31*03  229  ..........................C..............................T............--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.8% (23/24)    IGHD3-3*01   1    -----------------------------------------------------------------------------.............  13

                                      DR3-IMGT------------------------>                                  
                                       R  S  G  Y  P  S  G  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_1598   271  CGGAGTGGTTACCCCTCGGGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  337
D  95.8% (23/24)    IGHD3-3*01   14   T..........--------------------------------------------------------  24
J  100.0% (48/48)   IGHJ2*01     6    -------------------................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_131075

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            352     3e-99
IGHD3-9*01                                                                                            25.7    0.003
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAA	ATTACGATATTTT	N/A	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  S  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1599  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTTAGTAGGTCTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-7*01  47   .....................................C........C.A.........................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  N  E  D  E  S  R  R  S  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1599  91   AGTGGGTGGCCAACATAAACGAAGATGAAAGTAGGAGATCCTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (237/249)  IGHV3-7*01  137  ...................GC......G....GA..A..A..................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT---------------------------------------------------->                            
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  A  N  Y  D  I  L  G  
                    Query_1599  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTACTACTGTGCGAGAGCAAATTACGATATTTTGGGCC  270
V  95.2% (237/249)  IGHV3-7*01  227  ....................................C..................T.............---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD3-9*01  3    ------------------------------------------------------------------------.............-----  15
J  100.0% (32/32)   IGHJ4*02    17   -------------------------------------------------------------------------------------.....  21

                                                                
                                     Q  G  T  L  V  T  V  S  S  
                    Query_1599  271  AGGGAACCCTGGTCACCGTCTCCTCAG  297
J  100.0% (32/32)   IGHJ4*02    22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_131074

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           277     9e-77
IGHD2-21*02                                                                                           19.9    0.15 
IGHJ5*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGGCCGGTGTGTCGA	TGGTGACTGC	CACGGATA	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGCCGGTGTGTCGATGGTGACTGCCACGGATACGACCGC	AKGRCVDGDCHGYDR	232	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	9	2	0	81.8
CDR1-IMGT	19	42	24	17	7	0	70.8
FR2-IMGT	43	93	51	48	3	0	94.1
CDR2-IMGT	94	117	24	20	4	0	83.3
FR3-IMGT	118	231	114	104	10	0	91.2
CDR3-IMGT (germline)	232	236	5	5	0	0	100
Total	N/A	N/A	229	203	26	0	88.6


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  T  G  F  D  F  I  Y  S  V  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  
                    Query_1600   8    GTGCAGTCACTGGATTCGACTTTATCTACTCTGTCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATATATCA  97
V  88.6% (203/229)  IGHV3-23*01  65   ......C.T........AC.....G.AG..A..C......C..........................................GC...T.  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  R  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  G  N  S  N  D  T  L  Y  L  
                    Query_1600   98   GTGGTAGTGGTCGTAATACATATTACGCAGACTCCGTGAAGGGCCGGTTCACCATTTCCAGAGGCAATTCGAACGACACGCTGTATCTGC  187
V  88.6% (203/229)  IGHV3-23*01  155  ...........G...GC.....C................................C.......A......C..GA...............  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      Q  M  N  S  L  R  V  D  D  T  A  L  Y  Y  C  A  K  G  R  C  V  D  G  D  C  H  G  Y  D  R  
                    Query_1600   188  AGATGAACAGCCTGAGAGTCGATGACACGGCCCTATATTACTGTGCGAAGGGCCGGTGTGTCGATGGTGACTGCCACGGATACGACCGCT  277
V  88.6% (203/229)  IGHV3-23*01  245  .A................C...G.........G................-----------------------------------------  293
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (10/10)   IGHD2-21*02  13   ----------------------------------------------------------------..........----------------  22
J  95.1% (39/41)    IGHJ5*02     11   ----------------------------------------------------------------------------------.....C..  18

                                                                       
                                      W  G  Q  G  T  L  V  I  V  S  S  
                    Query_1600   278  GGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  310
J  95.1% (39/41)    IGHJ5*02     19   .....................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_131077

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            329     3e-92
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCTA	TATTACTATGAAAGTAGTGGTT	CAT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCTATATTACTATGAAAGTAGTGGTTCATACTTCTTTGACTAC	ARSLYYYESSGSYFFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	228	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  D  S  I  S  N  S  R  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_1601   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCATCAGTAATTCTAGGTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  92.7% (228/246)  IGHV4-4*02   49   ...............................G.........C.G.AG..AC...................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  H  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  K  S  K 
                    Query_1601   91   GAGTGGATTGGAGACATCCATCATAGTGGGACCACCAACTACAATCCGTCCCTCAAGAGTCGAGTCACCCTCTCAGTAGACAAGTCCAAG  180
V  92.7% (228/246)  IGHV4-4*02   139  ...........G..A...T............G............C........................A.A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       K  R  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  Y  E  S  S 
                    Query_1601   181  AAGCGGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAAGCCTATATTACTATGAAAGTAGT  270
V  92.7% (228/246)  IGHV4-4*02   229  ..C.A.................G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  95.5% (21/22)    IGHD3-22*01  2    ------------------------------------------------------------------------...........T......  19

                                      -------------------->                                  
                                       G  S  Y  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1601   271  GGTTCATACTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  95.5% (21/22)    IGHD3-22*01  20   ....---------------------------------------------------  23
J  97.9% (47/48)    IGHJ4*02     1    -------...A............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_131076

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         297     7e-83
IGHD4-17*01                                                                                           21.8    0.042
IGHJ3*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGGGGA	ACTTCGGTGACTAC	GGGAGG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATTTGGGGAACTTCGGTGACTACGGGAGGGATGCTTTTGATATA	ARDLGNFGDYGRDAFDI	246	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	100	14	0	87.7
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	220	30	0	88


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  V  T  S  G  A  Y  C  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_1602     4    CCCTGAGACTCTCCTGCGCCGTCTCTGGTGGCTCCGTCACGAGTGGTGCTTACTGCTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  88.0% (220/250)  IGHV4-30-4*01  50   .....TCC...A.....A.T...............A...GC.......A.....A...................................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  R  S  I  G  G  T  Y  Y  N  S  S  L  K  S  R  I  I  I  S  F  D  T  S  
                    Query_1602     94   TGGAGTGGATTGGGTACATCCGTTCCATTGGGGGCACCTACTACAATTCGTCCCTCAAGAGTCGAATTATCATTTCATTTGACACGTCCA  183
V  88.0% (220/250)  IGHV4-30-4*01  140  ....................TA..A..G....A.............CC.................G...C...A...G.A..........  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                        K  N  Q  F  S  L  Q  L  S  S  V  T  A  S  D  T  A  V  Y  Y  C  A  R  D  L  G  N  F  G  D  
                    Query_1602     184  AGAACCAGTTTTCCCTGCAGTTGAGTTCTGTGACGGCCTCAGACACGGCCGTATATTACTGTGCCAGAGATTTGGGGAACTTCGGTGACT  273
V  88.0% (220/250)  IGHV4-30-4*01  230  ..........C......A..C....C........T...G.............G.................--------------------  299
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  92.9% (13/14)    IGHD4-17*01    3    ------------------------------------------------------------------------------...A........  14

                                        GT-------------------->                                  
                                        Y  G  R  D  A  F  D  I  W  G  Q  G  T  R  I  T  V  S  S  
                    Query_1602     274  ACGGGAGGGATGCTTTTGATATATGGGGCCAAGGGACAAGGATCACCGTCTCTTCAG  330
D  92.9% (13/14)    IGHD4-17*01    15   ..-------------------------------------------------------  16
J  93.9% (46/49)    IGHJ3*02       2    --------..............C................T.G...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_23162

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_1603   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.0% (223/245)  IGHV4-59*01  49   ...............................G........G.AGT.A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  R  S  R  A  S  I  S  V  D  T  S  K  S 
                    Query_1603   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAGGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGC  180
V  91.0% (223/245)  IGHV4-59*01  139  ........G......T..........G.GC......................A......A.T.A....A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_1603   181  CAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTT  270
V  91.0% (223/245)  IGHV4-59*01  229  ..............G.....C..................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1603   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_189209

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           336     1e-94
IGHD3-3*02                                                                                            35.3    4e-06
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGATGAAG	GTATTAACTTTTTTGGAGTGCTTATTA	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGATGAAGGTATTAACTTTTTTGGAGTGCTTATTAACTACTTTGACTTC	ARGDEGINFFGVLINYFDF	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  D  Y  A  M  T  W  V  R  Q  T  P  G  K  G  L  
                    Query_1604   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTCACTGACTATGCCATGACCTGGGTCCGCCAGACTCCAGGGAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-21*01  47   ................................T.........G.AG....AG.....A.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1604   91   AGTGGGTCTCCTCCATTAGTAGTAGTAGTACTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.2% (232/249)  IGHV3-21*01  137  ..........A...................G...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      R  N  L  V  F  L  Q  M  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  D  E  G  I  N  F  
                    Query_1604   181  GGAACTTAGTGTTTCTGCAGATGCACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGGGGATGAAGGTATTAACTTTT  270
V  93.2% (232/249)  IGHV3-21*01  227  A.....C.C...A......A...A............................G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (24/27)    IGHD3-3*02   1    ------------------------------------------------------------------------------......G.A...  12

                                      -IMGT----------------------->                                  
                                      F  G  V  L  I  N  Y  F  D  F  W  G  P  G  A  L  V  T  V  S  S  
                    Query_1604   271  TTGGAGTGCTTATTAACTACTTTGACTTCTGGGGCCCGGGAGCCCTGGTCACCGTCTCCTCAG  333
D  88.9% (24/27)    IGHD3-3*02   13   ........G......------------------------------------------------  27
J  93.8% (45/48)    IGHJ4*02     1    ---------------............A........A....A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_23160

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           382     3e-108
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTTGTGG	TACTCTGGTTCGGGGAGT	AAAACCCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTTGTGGTACTCTGGTTCGGGGAGTAAAACCCATTTTGACTAC	ARGLWYSGSGSKTHFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_1605   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (247/250)  IGHV4-31*03  49   .............................................................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1605   91   CTGGAGTGGATTGGGTACATTTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (247/250)  IGHV4-31*03  139  ....................C.....................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  W  Y  S  G  S 
                    Query_1605   181  AAGAACCAGTTCTCCCTGAAGCTGCGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGTTTGTGGTACTCTGGTTCG  270
V  98.8% (247/250)  IGHV4-31*03  229  ........................A.............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  5    ------------------------------------------------------------------------------....A.......  16

                                      MGT-------------------->                                  
                                       G  S  K  T  H  F  D  Y  W  G  Q  G  T  L  V  T  V  A  S  
                    Query_1605   271  GGGAGTAAAACCCATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCGCCTCAG  328
D  94.4% (17/18)    IGHD3-10*01  17   ......----------------------------------------------------  22
J  97.7% (42/43)    IGHJ4*02     6    ---------------....................................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_23166

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           363     1e-102
IGHD3-3*01                                                                                            33.4    1e-05 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCCATCTTGGCGG	TTACGCTTTTTGGCGTGGTTATT	CCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCCATCTTGGCGGTTACGCTTTTTGGCGTGGTTATTCCCTTGACTAC	ARDPHLGGYAFWRGYSLDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1606   1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCCCCAGGCAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-33*01  47   ....................G........................G...........................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  H  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_1606   91   AGTGGGTGGCTGTTATATGGTATGATGGAAGTAATAAATACCATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCA  180
V  96.4% (241/250)  IGHV3-33*01  137  ..........A..............................T.............................A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  K  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  H  L  G  G  Y  
                    Query_1606   181  AGAAGACGTTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGAGATCCCCATCTTGGCGGTTACG  270
V  96.4% (241/250)  IGHV3-33*01  227  ....C...C.................................................C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.3% (21/23)    IGHD3-3*01   4    -------------------------------------------------------------------------------------.....  8

                                      -IMGT----------------------->                                  
                                      A  F  W  R  G  Y  S  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1606   271  CTTTTTGGCGTGGTTATTCCCTTGACTACTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  333
D  91.3% (21/23)    IGHD3-3*01   9    A.......A.........---------------------------------------------  26
J  97.6% (41/42)    IGHJ4*02     7    ---------------------............................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_23164

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD2-8*01                                                                                            12.2    31   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GTATCC	CTAATG	CCACCTTCA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGTATCCCTAATGCCACCTTCAACTTTGACTAC	AKGIPNATFNFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1607   1    GGTCCCTGAGACTCTCCTGTGCAGCATCTGGATTCACCTTTACCACCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-23*01  47   .........................C................G..G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  V  I  G  V  S  D  T  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1607   91   ACTGGGTCTCAGTAATTGGTGTTAGTGATACTAAGACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-23*01  137  .G..........CT...A...G.....G.GG..GC.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  I  P  N  A  T  F  
                    Query_1607   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGGTATCCCTAATGCCACCTTCA  270
V  94.4% (235/249)  IGHV3-23*01  227  .....................................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-8*01   12   ---------------------------------------------------------------------------......---------  17

                                      ---------->                                  
                                      N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1607   271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (45/45)   IGHJ4*02     4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_23165

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           321     7e-90
IGHD3-16*01                                                                                           31.5    6e-05
IGHJ3*02                                                                                              48.8    8e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GGCAAACA	TATTATGACTACCTTTGGAGGAGTT	TCCGCTT	TGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCACAGGGCAAACATATTATGACTACCTTTGGAGGAGTTTCCGCTTTGACGCTTTAGATATT	VTGQTYYDYLWRSFRFDALDI	249	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	102	12	0	89.5
CDR3-IMGT (germline)	249	255	7	5	2	0	71.4
Total	N/A	N/A	255	230	25	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  S  F  N  D  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1608   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTTAGTTTCAATGACGCCTGGATGAACTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  90.2% (230/255)  IGHV3-15*01  47   .......T........................T.C.C.....G.A............G...............T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  S  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  I  I  S  R  D  
                    Query_1608   91   AGTGGGTTGGCCGTATTAAGAGCAAAAGTGATGGCGGGACAACAGACTACGCCGCACCCGTGAAAGGCAGATTCATTATCTCAAGAGATG  180
V  90.2% (230/255)  IGHV3-15*01  137  ...................A.......C......T.................T......................CC.............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  A  T  T  L  Y  L  Q  M  N  S  L  R  I  E  D  T  A  V  Y  Y  C  V  T  G  Q  T  Y  Y  
                    Query_1608   181  ATTCAGCAACCACCCTGTATCTGCAGATGAACAGCCTGCGAATCGAGGACACAGCCGTCTATTACTGTGTCACAGGGCAAACATATTATG  270
V  90.2% (230/255)  IGHV3-15*01  227  .....AA..A...G...........A............AA..C...............G.........AC.....---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  88.0% (22/25)    IGHD3-16*01  2    -----------------------------------------------------------------------------------.......  8

                                      -----CDR3-IMGT-------------------------->                                 
                                      D  Y  L  W  R  S  F  R  F  D  A  L  D  I  W  G  Q  G  T  E  V  S  V  S  S 
                    Query_1608   271  ACTACCTTTGGAGGAGTTTCCGCTTTGACGCTTTAGATATTTGGGGCCAAGGGACAGAGGTTTCGGTCTCTTCA  344
D  88.0% (22/25)    IGHD3-16*01  9    .T...G.....G......--------------------------------------------------------  26
J  83.7% (41/49)    IGHJ3*02     1    -------------------------...T.....T.....C...............AT...CA.C.........  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_94148

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           367     6e-104
IGHD3-22*01                                                                                           27.6    8e-04 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCACCGATCC	TATAACGATGTTAGTAGTGGTTA	CC	ACTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCACCGATCCTATAACGATGTTAGTAGTGGTTACCACTTGGACTAT	ARVHRSYNDVSSGYHLDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1609   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAGTTATGAGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGTTGG  90
V  97.2% (242/249)  IGHV3-48*03  47   ...........................................T........A.................................C...  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  G  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1609   91   AGTGGGTTTCATACATTAGTAGTAGTGGTAGTGGCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (242/249)  IGHV3-48*03  137  ................................AC........................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  F  C  A  R  V  H  R  S  Y  N  D  
                    Query_1609   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTTTATTTCTGTGCGAGAGTCCACCGATCCTATAACGATG  270
V  97.2% (242/249)  IGHV3-48*03  227  ........................................G................A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.0% (20/23)    IGHD3-22*01  2    --------------------------------------------------------------------------------...T..T...  11

                                      IMGT--------------------->                                  
                                      V  S  S  G  Y  H  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1609   271  TTAGTAGTGGTTACCACTTGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  330
D  87.0% (20/23)    IGHD3-22*01  12   A............-----------------------------------------------  24
J  93.3% (42/45)    IGHJ4*02     4    ---------------....T.....C.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_1078

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           10.3    117  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAGGTTTCGATA	GGGGG	G	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAGGTTTCGATAGGGGGGGGTTCGACCCC	ARDRGFDRGGFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1610   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A......A..............................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  Y  Y  S  G  S  I  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  M  P  K  N 
                    Query_1610   91   TGGATTGCGTATATCTATTACAGTGGGAGCATCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACATGCCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  .......G.......................C...C.....................................T.....C.T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  I  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  G  F  D  R  G  G  F 
                    Query_1610   181  CAGATCTCCCTGAAGTTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATAGAGGTTTCGATAGGGGGGGGTTC  270
V  95.1% (233/245)  IGHV4-59*01  229  ...T...........C................T................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -------------------------------------------------------------------------------.....------  22
J  100.0% (45/45)   IGHJ5*02     7    -------------------------------------------------------------------------------------.....  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1610   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (45/45)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_1076

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           347     7e-98
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATAG	GGGTG	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATAGGGGTGACTATTTTGACTAC	ARGLHYYDRGDYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_1611   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTCACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.4% (236/250)  IGHV4-31*03  49   ..................................C......C.........T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1611   91   CTGGAGTGGATTGGGTTCATTTATTACAGTGGGACCACCTACTACAATAAGTCCCTCAAGAGTCGAGTCACCATATCGGTAGACACGTCT  180
V  94.4% (236/250)  IGHV4-31*03  139  ................A...C.............G............CCC..................T........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R 
                    Query_1611   181  AAGAACCAGTTCTCCCTGAATCTGCGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCTCCATTACTATGATAGG  270
V  94.4% (236/250)  IGHV4-31*03  229  ....................G...A.............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD3-22*01  3    ----------------------------------------------------------------------------.............-  15

                                      ----------------->                                  
                                       G  D  Y  F  D  Y  W  G  Q  G  I  L  V  P  V  S  S  
                    Query_1611   271  GGTGACTATTTTGACTACTGGGGCCAGGGAATCCTGGTCCCCGTCTCCTCAG  322
J  93.8% (45/48)    IGHJ4*02     1    ----....C......................C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_1075

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           343     2e-96
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CATGCTTTCCTCGACTGATATGT	CGTTCGGGGGA	TTTTTGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACATGCTTTCCTCGACTGATATGTCGTTCGGGGGATTTTTGATTGACCAG	ARDMLSSTDMSFGGFLIDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  S  S  R  S  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_1612   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGACTCCATCAGCAGTAGAAGTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGG  90
V  93.6% (235/251)  IGHV4-39*02  49   ...................C...........G...............T...........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  E  S  R  V  A  I  S  I  D  T  S 
                    Query_1612   91   CTGGAATGGATTGGGAATATCTATTATAGTGGGAGCACCGACTACAACCCGTCCCTCGAGAGTCGAGTCGCCATATCGATAGACACGTCC  180
V  93.6% (235/251)  IGHV4-39*02  139  .....G..........G......................T.................A...........A.......CG...........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  M  L  S  S  T  D 
                    Query_1612   181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACCGCCGCAGACACGGCTATTTATTACTGTGCGAGAGACATGCTTTCCTCGACTGAT  270
V  93.6% (235/251)  IGHV4-39*02  229  ........C............C....C........................G.G.................-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       M  S  F  G  G  F  L  I  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1612   271  ATGTCGTTCGGGGGATTTTTGATTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  90.9% (10/11)    IGHD3-16*01  13   ----....T......-------------------------------------------------  23
J  95.2% (40/42)    IGHJ4*02     7    ----------------------.....T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_1074

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            276     3e-76
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	96	18	0	84.2
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	211	35	0	85.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_1613   1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  85.8% (211/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  S  M  S  V  D  K  S  K 
                    Query_1613   91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCAGCATGTCAGTAGACAAGTCCAAG  180
V  85.8% (211/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A............C...A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  N  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_1613   181  AATCAATTCTCCCTCACGCTGACGTCTCTGAACGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  85.8% (211/246)  IGHV4-4*01   229  ..C..G........G.A.....GC...G...C..................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_1613   271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_1073

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            291     6e-81
IGHD2-21*02                                                                                           29.5    2e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCTGT	TGCCTCGCT	TATTGTGCTGGTGACTGC	ATCCGCGATAAAACGGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TGCCTCGCTTATTGTGCTGGTGACTGCATCCGCGATAAAACGGCCTACTTTGACTAC	CLAYCAGDCIRDKTAYFDY	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	44	7	0	86.3
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	102	12	0	89.5
Total	N/A	N/A	240	213	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  R  A  V  S  G  V  S  V  I  S  S  N  W  W  T  W  V  R  Q  T  P  T  K  G  L 
                    Query_1614   1    ACCCTGTCCCTCACCCGCGCTGTCTCTGGTGTCTCCGTCATCAGCAGTAACTGGTGGACTTGGGTCCGCCAGACCCCAACTAAGGGGCTG  90
V  88.8% (213/240)  IGHV4-4*01   49   ...............T...............G....A...G...T.............G.............C.....GGG.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_1614   91   GAGTGGATTGGAGACATCTATTATAGGGGGAACACCAACTACAACCCGTCCCTCGAGAGCCGAGTCACCATCTCAGTGGACAAGTCCAAG  180
V  88.8% (213/240)  IGHV4-4*01   139  ...........G..A......C....T....G......................A....T...........A.....A............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       N  H  F  S  L  N  L  N  S  V  T  A  A  D  T  A  I  Y  F  C  C  L  A  Y  C  A  G  D  C  I 
                    Query_1614   181  AACCACTTCTCCCTGAACCTGAACTCTGTCACCGCCGCGGACACGGCAATATATTTCTGTTGCCTCGCTTATTGTGCTGGTGACTGCATC  270
V  88.8% (213/240)  IGHV4-4*01   229  .....G...........G....G......G.................CG.G....G....------------------------------  288
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C                               
D  94.4% (17/18)    IGHD2-21*02  5    ---------------------------------------------------------------------.......G..........---  22

                                      MGT----------------------->                                  
                                       R  D  K  T  A  Y  F  D  Y  W  G  P  G  A  P  V  T  V  S  S  
                    Query_1614   271  CGCGATAAAACGGCCTACTTTGACTACTGGGGCCCGGGAGCCCCGGTCACCGTCTCCTCAG  331
J  93.6% (44/47)    IGHJ4*02     2    --------------....................A....A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_1072

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           324     8e-91
IGHD3-16*01                                                                                           14.1    8.6  
IGHJ1*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GATGGCGGGTTCTATGAAGTTGG	TGCTTAT	TCTCCAC	AATAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGATGGCGGGTTCTATGAAGTTGGTGCTTATTCTCCACAATACTTCCACCAC	ADGGFYEVGAYSPQYFHH	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  T  R  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1615   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTTACCAGATATGGCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  92.2% (226/245)  IGHV3-23*01  47   ........................C.................G...C....C......C..........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  T  T  S  G  D  I  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1615   91   AGTGGGTCTCAGGTATTACTACCAGTGGTGACATTACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.2% (226/245)  IGHV3-23*01  137  ............C.....G.GGT.......GT.GC.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  S  A  I  Y  Y  C  A  D  G  G  F  Y  E  V  G  
                    Query_1615   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACTCGGCCATATATTACTGTGCGGATGGCGGGTTCTATGAAGTTGGTG  270
V  92.2% (226/245)  IGHV3-23*01  227  ........C...............................G...A.....G..............-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  28   ----------------------------------------------------------------------------------------..  29

                                      IMGT--------------------->                                  
                                      A  Y  S  P  Q  Y  F  H  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1615   271  CTTATTCTCCACAATACTTCCACCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (7/7)     IGHD3-16*01  30   .....-------------------------------------------------------  34
J  97.9% (47/48)    IGHJ1*01     5    ------------..........G.....................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_1071

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ5*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACGC	GCAGTGGTTGGT	CTAGAGGAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACGCGCAGTGGTTGGTCTAGAGGATACAACTGGTTCGACCCC	ARTRSGWSRGYNWFDP	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_1616   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAGT  93
V  92.1% (223/242)  IGHV4-59*01  50   .....TCC...A....C.........................G............C.................A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  D  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  S  I  S  G  D  T  S  K  N  
                    Query_1616   94   GGATTGGATATATCTATGACAGTGGGAACACCAACTATAATCCCTCCCTCAAGAGTCGAGTCAGCATCTCAGGAGACACGTCCAAGAACC  183
V  92.1% (223/242)  IGHV4-59*01  140  .......G.........T.........G.........C..C......................C...A....T.................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  F  Y  Y  C  A  R  T  R  S  G  W  S  R  G  Y  
                    Query_1616   184  AGTTCTCCCTGAAACTGAGCTCTGTGACCGCTGCGGACACGGCCTTTTATTACTGTGCGAGAACGCGCAGTGGTTGGTCTAGAGGATACA  273
V  92.1% (223/242)  IGHV4-59*01  230  .............G..............................G.G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  91.7% (11/12)    IGHD6-19*01  8    ------------------------------------------------------------------.......C....------------  19
J  98.0% (50/51)    IGHJ5*02     1    ---------------------------------------------------------------------------------------...  3

                                      ------------->                                  
                                      N  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_1616   274  ACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  321
J  98.0% (50/51)    IGHJ5*02     4    ....................................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_92603

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_1617   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_1617   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_1617   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_1617   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_21070

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           329     3e-92
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTACGGGTCGGGAAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCCTCTATTACTACGGGTCGGGAAGTTATTTTGACTCC	VRGLYYYGSGSYFDS	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  S  G  K  G 
                    Query_1618   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCGGCAGTGGTGGTTATTACTGGAGCTGGATTCGCCAGCACTCAGGGAAGGGC  90
V  92.0% (230/250)  IGHV4-31*03  49   ...............................G.......A.............C..............C.........C...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  V  G  H  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_1618   91   CTGGAGTGGGTCGGGCACATTTATTACAGTGGGACTACCTACTACAACCCGTCCCTCAAGAGTCGAGTTTCCATTTCAGTGGACACGTCT  180
V  92.0% (230/250)  IGHV4-31*03  139  .........A.T...T....C.............GC.................................A....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  F  N  S  V  T  A  A  D  T  A  V  Y  H  C  V  R  G  L  Y  Y  Y  G  S 
                    Query_1618   181  AAGAATCAGTTCTCCCTGAAGTTCAACTCTGTGACTGCCGCGGACACGGCCGTGTATCACTGTGTGAGAGGCCTCTATTACTACGGGTCG  270
V  92.0% (230/250)  IGHV4-31*03  229  .....C...............C.G.G...............................T......C.....--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  87.5% (21/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------........T..T...  16

                                      ----------------->                                  
                                       G  S  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1618   271  GGAAGTTATTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  87.5% (21/24)    IGHD3-10*01  17   ..G......-------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_181050

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            385     4e-109
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	248	2	0	99.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1619   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.2% (248/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_1619   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  99.2% (248/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_1619   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  99.2% (248/250)  IGHV3-7*01   227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1619   271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_91918

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           343     2e-96
IGHD2-21*01                                                                                           10.3    124  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTC	GTGAT	CGGTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCGTGATCGGTGACTACTTTGACCAA	ARHVVIGDYFDQ	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  D  A  S  I  S  S  S  R  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_1620   1    ACCCTGTCCCTCACCTGCACTGTCTCTGATGCCTCCATCAGCAGTAGTAGATACTATTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.6% (235/251)  IGHV4-39*01  49   ............................G..G..................T.....C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  H  I  G  S  T  F  Y  K  Q  S  L  K  T  R  V  T  I  S  I  D  S  S 
                    Query_1620   91   CTGGAGTGGATTGGGAGTATTTATCATATTGGGAGCACCTTCTACAAACAGTCCCTCAAGACTCGAGTCACCATATCCATAGACTCGTCC  180
V  93.6% (235/251)  IGHV4-39*01  139  ....................C...T...G...........A......C.C...........G................G.....A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  H  V  V  I  G  D  Y 
                    Query_1620   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTATATATTACTGTGCGAGACATGTCGTGATCGGTGACTAC  270
V  93.6% (235/251)  IGHV4-39*01  229  ...................A...............................G.G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD2-21*01  15   ---------------------------------------------------------------------------.....----------  19
J  95.8% (46/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1620   271  TTTGACCAATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  95.8% (46/48)    IGHJ4*02     6    ......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_278300

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         367     6e-104
IGHD4-17*01                                                                                           21.8    0.040 
IGHJ5*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGACTACGGTG	GTGACTC	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATGACTACGGTGGTGACTCCAATTGGTTCGACCCC	VRDDYGGDSNWFDP	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	243	8	0	96.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  R  G 
                    Query_1621     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  96.8% (243/251)  IGHV4-30-2*01  49   .....................................................................................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  S  Y  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_1621     91   CTGGAGTGGATTGGGTACATCTATCATAGTGGGAGCTCCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCAATAGACACGTCC  180
V  96.8% (243/251)  IGHV4-30-2*01  139  ....................................A.....................................A...G......G....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  D  D  Y  G  G  D  S 
                    Query_1621     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGTCAGAGATGACTACGGTGGTGACTCC  270
V  96.8% (243/251)  IGHV4-30-2*01  229  .....................................................G.....C....C......-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD4-17*01    1    -----------------------------------------------------------------------...........--------  11
J  97.9% (47/48)    IGHJ5*02       2    -----------------------------------------------------------------------------------------.  2

                                        -------------->                                
                                         N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1621     271  AATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  317
J  97.9% (47/48)    IGHJ5*02       3    ..C............................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_91916

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           272     2e-75
IGHD6-19*01                                                                                           16.1    2.4  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCAGTATCA	AGTGGCTG	CCATCAGAACTCCCCCTTGG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCAGTATCAAGTGGCTGCCATCAGAACTCCCCCTTGGGACTCC	ARGQYQVAAIRTPPWDS	265	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	150	48	19	2	27	39.6
FR3-IMGT	151	264	114	101	13	0	88.6
CDR3-IMGT (germline)	265	272	8	8	0	0	100
Total	N/A	N/A	272	225	20	27	82.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_1622   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAATTGGATCCGCCAGTCCCCAGGGAAGGGTCTGGAG  90
V  82.7% (225/272)  IGHV4-34*01  49   .......................................................GC............C.............G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-------------------CDR2-IMGT------------------><-----------------------------
                                       W  I  G  E  I  N  H  D  V  G  S  W  E  F  K  N  R  G  S  A  D  Y  N  P  S  L  K  S  R  V 
                    Query_1622   91   TGGATTGGAGAAATCAATCATGATGTAGGCAGCTGGGAATTCAAGAATCGTGGAAGCGCCGACTACAACCCGTCCCTCAAGAGTCGAGTC  180
V  82.7% (225/272)  IGHV4-34*01  139  ........G............A---------------------------........A..A.............................  201
                                       W  I  G  E  I  N  H                             S  G  S  T  N  Y  N  P  S  L  K  S  R  V 

                                      -----------------------FR3-IMGT----------------------------------------------------><-----
                                       T  I  S  L  D  T  S  K  T  Q  F  S  L  R  M  T  S  V  T  P  A  D  T  G  V  Y  Y  C  A  R 
                    Query_1622   181  ACCATTTCCTTGGACACGTCCAAGACCCAGTTCTCCCTGAGAATGACCTCTGTGACCCCCGCGGACACGGGTGTCTATTACTGTGCGAGA  270
V  82.7% (225/272)  IGHV4-34*01  202  .....A..AG.A.............A..............AGC...G..........G............C...G...............  291
                                       T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R 

                                      ---------------CDR3-IMGT-------------------->                                  
                                       G  Q  Y  Q  V  A  A  I  R  T  P  P  W  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_1622   271  GGCCAGTATCAAGTGGCTGCCATCAGAACTCCCCCTTGGGACTCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  349
V  82.7% (225/272)  IGHV4-34*01  292  ..-----------------------------------------------------------------------------  293
                                       G                                                                             
D  100.0% (8/8)     IGHD6-19*01  10   -----------........------------------------------------------------------------  17
J  95.0% (38/40)    IGHJ4*02     9    ---------------------------------------....A..............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_281258

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_1623   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1623   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_1623   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1623   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_91915

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           366     2e-103
IGHD5-12*01                                                                                           23.8    0.011 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCTGCCATCGGATACTTT	GTGGCTACGATT	CGGGTGAGGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTGCCATCGGATACTTTGTGGCTACGATTCGGGTGAGGGCATGGACGTC	ARLCHRILCGYDSGEGMDV	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  S  T  N  F  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_1624   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGGAGTACTAATTTCTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.8% (242/250)  IGHV4-39*01  49   ...............................G.........C....G..G..A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1624   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  96.8% (242/250)  IGHV4-39*01  139  ..........................................................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  D  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  C  H  R  I  L  C 
                    Query_1624   181  AAGGACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGACTCTGCCATCGGATACTTTGT  270
V  96.8% (242/250)  IGHV4-39*01  229  ...A.....................G...............A............................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD5-12*01  10   ----------------------------------------------------------------------------------------..  11

                                      3-IMGT----------------------->                                 
                                       G  Y  D  S  G  E  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1624   271  GGCTACGATTCGGGTGAGGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
D  100.0% (12/12)   IGHD5-12*01  12   ..........-----------------------------------------------------  21
J  100.0% (42/42)   IGHJ6*02     21   ---------------------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_91913

Length=414
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           425     3e-121
IGHD3-16*01                                                                                           29.5    2e-04 
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCTA	GTATTATGTTCACATTTGGGGGAG	AAACACACCGTCTAAC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAGTATTATGTTCACATTTGGGGGAGAAACACACCGTCTAACTGATGCTTTTGAGATC	ARASIMFTFGGETHRLTDAFEI	290	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	73	2	0	97.3
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	294	283	11	0	96.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S 
                    Query_1625   2    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTAGC  91
V  96.3% (283/294)  IGHV5-51*03  1    .....G........G...................................................................G.....C.  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  E  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y 
                    Query_1625   92   AGCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGGAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATACCAGATAC  181
V  96.3% (283/294)  IGHV5-51*03  91   ....................................A....................A................................  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       G  P  S  F  E  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 
                    Query_1625   182  GGGCCGTCCTTCGAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGAC  271
V  96.3% (283/294)  IGHV5-51*03  181  A.C.........C................C............................................................  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><----------------------------CDR3-IMGT--------------------------->      
                                       T  A  M  Y  Y  C  A  R  A  S  I  M  F  T  F  G  G  E  T  H  R  L  T  D  A  F  E  I  W  G 
                    Query_1625   272  ACCGCCATGTATTACTGCGCGAGAGCTAGTATTATGTTCACATTTGGGGGAGAAACACACCGTCTAACTGATGCTTTTGAGATCTGGGGC  361
V  96.3% (283/294)  IGHV5-51*03  271  .................T......------------------------------------------------------------------  294
                                       T  A  M  Y  Y  C  A  R                                                                   
D  87.5% (21/24)    IGHD3-16*01  1    ----------------------------........A.T..G..........--------------------------------------  24
J  96.0% (48/50)    IGHJ3*02     1    --------------------------------------------------------------------............T.........  22

                                                                  
                                       Q  G  T  V  V  T  V  S  S  
                    Query_1625   362  CAAGGGACAGTGGTCACCGTCTCTTCAG  389
J  96.0% (48/50)    IGHJ3*02     23   .........A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40604112


Query= Query_91910

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           327     1e-91
IGHD3-10*01                                                                                           12.2    35   
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTAAATTGGGAATCCGGGGG	GGTGCGGGG	GTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTAAATTGGGAATCCGGGGGGGTGCGGGGGTTTTTGACCAC	ATKLGIRGGAGVFDH	275	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	85	24	9	6	9	37.5
FR2-IMGT	86	136	51	48	3	0	94.1
CDR2-IMGT	137	160	24	19	5	0	79.2
FR3-IMGT	161	274	114	106	8	0	93
CDR3-IMGT (germline)	275	278	4	4	0	0	100
Total	N/A	N/A	287	250	28	9	87.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  Q  P  G  S  S  V  K  V  S  C  K  A  S  S           T  S  Y
                    Query_1626   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGCAGCCTGGGTCCTCGGTGAAGGTTTCCTGCAAGGCCAGTAGT---------ACCAGTTA  81
V  87.1% (250/287)  IGHV1-69*01  6    ..................G............A......................C...........TTC.G.AGGCACCTTC.G...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  S  W  V  R  L  A  P  G  Q  G  L  E  W  M  G  G  I  T  P  M  F  G  T  T  N  Y  A  Q
                    Query_1626   82   TTTTATCAGCTGGGTGCGACTGGCCCCTGGACAAGGCCTTGAGTGGATGGGAGGCATCACCCCTATGTTTGGAACAACTAACTACGCACA  171
V  87.1% (250/287)  IGHV1-69*01  96   .GC.................A...............G.................G....T......C.....T...G.A...........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  A  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  G  D  T  A
                    Query_1626   172  GAAGTTTCAGGGCAGAGTCGCGATTACCGCGGACGAATCTACGAGCACCGCCTACATGGAGTTGAGCAGCCTGAGATCTGGGGACACGGC  261
V  87.1% (250/287)  IGHV1-69*01  186  ......C............A...................C........A............C..................A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  T  K  L  G  I  R  G  G  A  G  V  F  D  H  W  G  Q  G  T  P  V  T  V  S  A
                    Query_1626   262  CGTATATTATTGTGCGACTAAATTGGGAATCCGGGGGGGTGCGGGGGTTTTTGACCACTGGGGCCAGGGAACCCCAGTCACCGTCTCCGC  351
V  87.1% (250/287)  IGHV1-69*01  276  ...G.....C.......-------------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                           
D  88.9% (8/9)      IGHD3-10*01  11   -------------------------------------...T.....--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    -------------------------------------------------......T..................TG............T.  46

                                        
                                        
                    Query_1626   352  AG  353
J  90.7% (39/43)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_240067

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	29	27	27	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  L  R  Q  A  P  G  K  G  P  E 
                    Query_1627   3    TCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGCTCCGCCAGGCTCCAGGGAAGGGGCCGGAG  92
V  93.5% (232/248)  IGHV3-23*01  49   ........................................G..G.T.....A....C...G........................T....  138
                                       S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E 

                                      -----------><-------CDR2-IMGT------><----------------------------------------------------F
                                       W  V  S  A  I  T  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  K 
                    Query_1627   93   TGGGTCTCAGCGATTACTGGGAGTGGTAGTAGCACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCAAG  182
V  93.5% (232/248)  IGHV3-23*01  139  ...........T....G...T......G..............G......................................A........  228
                                       W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  Y 
                    Query_1627   183  AACACGCTGTATCTGCAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTTAT  272
V  93.5% (232/248)  IGHV3-23*01  229  .............................G....................A..............A..----------------------  296
                                       N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                         
D  100.0% (10/10)   IGHD3-22*01  17   ---------------------------------------------------------------------------------.........  25

                                      -------------->                                  
                                       S  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1627   273  TCACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  26   .------------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    -------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_62183

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           321     7e-90
IGHD3-16*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCTGCGGACTGG	GATTACG	GTT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCTGCGGACTGGGATTACGGTTACTGGTTTGACCAC	AKAADWDYGYWFDH	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1628   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCGCCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.5% (226/247)  IGHV3-23*01  47   ............................................AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  G  S  H  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1628   91   AGTGGGTCTCAGGTATTAGTGGTGGTTCTCATAATACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.5% (226/247)  IGHV3-23*01  137  ............C..........A..GG.GG..GC.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  L  R  M  N  N  L  R  A  E  D  A  A  L  Y  Y  C  A  K  A  A  D  W  D  Y  G  
                    Query_1628   181  AGAACACGCTCTCTCTGCGCATGAACAATCTCAGAGCCGAGGACGCGGCCCTATACTACTGTGCGAAGGCTGCGGACTGGGATTACGGTT  270
V  91.5% (226/247)  IGHV3-23*01  227  ..........G.A.....AA.......GC..G............A.....G....T...........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  8    --------------------------------------------------------------------------------.......---  14

                                      ------------->                                  
                                      Y  W  F  D  H  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_1628   271  ACTGGTTTGACCACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  93.8% (45/48)    IGHJ5*02     4    .......C....C..............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_94149

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CATTTC	TATTACTATGATGCTAGTGGTT	CTTCAGGTGGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATTTCTATTACTATGATGCTAGTGGTTCTTCAGGTGGCGACTAC	AKHFYYYDASGSSGGDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1629   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGGAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-23*01  47   ...........................................C..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  D  I  S  D  N  A  A  H  T  Y  Y  A  E  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_1629   91   AGTGGGTCTCAGATATTAGTGATAATGCTGCTCATACATACTACGCAGAGTCCGTGAGGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (236/248)  IGHV3-23*01  137  ............C........G..G..G..G.AGC..............C.......A................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  H  F  Y  Y  Y  D  A  
                    Query_1629   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAAACATTTCTATTACTATGATGCTA  270
V  95.2% (236/248)  IGHV3-23*01  227  ........................................G...........................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.9% (20/22)    IGHD3-22*01  2    --------------------------------------------------------------------------............AG..  17

                                      GT-------------------->                                  
                                      S  G  S  S  G  G  D  Y  G  G  Q  G  T  L  V  P  V  S  S  
                    Query_1629   271  GTGGTTCTTCAGGTGGCGACTACGGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  327
D  90.9% (20/22)    IGHD3-22*01  18   ......---------------------------------------------------  23
J  95.0% (38/40)    IGHJ4*02     9    -----------------......T....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_181053

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           279     3e-77
IGHD1-7*01                                                                                            10.3    114  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGCGCAGA	GAACT	CGATT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGTGCGCAGAGAACTCGATTACTACTTTGACTCC	VRVRRELDYYFDS	229	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	10	1	0	90.9
CDR1-IMGT	19	42	24	21	3	0	87.5
FR2-IMGT	43	93	51	46	5	0	90.2
CDR2-IMGT	94	114	21	16	5	0	76.2
FR3-IMGT	115	228	114	104	10	0	91.2
CDR3-IMGT (germline)	229	235	7	6	1	0	85.7
Total	N/A	N/A	228	203	25	0	89


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  S  V  S  G  T  Y  M  S  W  V  R  Q  G  P  R  K  G  L  E  W  V  S  I  I  
                    Query_1630   8    GTGCAGTCTCTGGGTTCTCCGTCAGTGGCACCTACATGAGCTGGGTCCGCCAGGGTCCACGGAAGGGACTGGAGTGGGTCTCTATTATCT  97
V  89.0% (203/228)  IGHV3-53*01  65   ......C..........A........A...A.......................C....G.......G..............AG....T.  154
                                         A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  

                                      --CDR2-IMGT-----><----------------------------------------------------FR3-IMGT------------
                                      Y  T  G  G  P  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  V  Y  L  Q  
                    Query_1630   98   ATACTGGTGGTCCCACATTCTACGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAATTCCAAGAACACAGTCTATCTTCAAA  187
V  89.0% (203/228)  IGHV3-53*01  155  ...GC......AG.....A........................A................................GC.G..........  244
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  

                                      ----------------------------------------><--------------CDR3-IMGT-------------->          
                                      M  N  S  L  R  G  E  D  T  A  I  Y  Y  C  V  R  V  R  R  E  L  D  Y  Y  F  D  S  W  G  Q  
                    Query_1630   188  TGAACAGCCTGCGCGGCGAGGACACGGCCATTTATTACTGTGTGAGAGTGCGCAGAGAACTCGATTACTACTTTGACTCCTGGGGCCAGG  277
V  89.0% (203/228)  IGHV3-53*01  245  ...........A.A.C.............G.G..........C.....------------------------------------------  292
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                            
D  100.0% (5/5)     IGHD1-7*01   11   --------------------------------------------------------.....-----------------------------  15
J  97.9% (47/48)    IGHJ4*02     1    ------------------------------------------------------------------............A...........  24

                                                              
                                      G  T  L  V  T  V  S  S  
                    Query_1630   278  GAACCCTGGTCACCGTCTCCTCAG  301
J  97.9% (47/48)    IGHJ4*02     25   ........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_137658

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           297     7e-83
IGHD5-12*01                                                                                           12.2    32   
IGHJ4*02                                                                                              46.8    3e-09


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	TACAATTAC	GGCCCTAGCGCTTTTCAGCTCTTCG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTACAATTACGGCCCTAGCGCTTTTCAGCTCTTCGTTGACTGC	ARYNYGPSAFQLFVDC	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	216	26	0	89.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  D  Y  Y  W  S  W  V  R  Q  S  P  G  K  G  L  E 
                    Query_1631   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGTGACTACTATTGGAGTTGGGTCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  89.3% (216/242)  IGHV4-59*08  49   ...................C......................AGT.....C.....C...A........C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  F  Y  S  G  S  A  T  Y  N  P  S  L  G  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1631   91   TGGATTGGCTATGTCTTTTACAGTGGGAGCGCCACCTACAACCCCTCCCTCGGGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  89.3% (216/242)  IGHV4-59*08  139  ........G...A...A.............A...A................AA.....................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       D  Y  S  L  R  L  T  S  A  T  A  A  D  T  A  V  Y  C  C  A  R  Y  N  Y  G  P  S  A  F  Q 
                    Query_1631   181  GACTACTCCCTGAGACTGACCTCCGCGACCGCCGCAGACACGGCCGTCTATTGCTGTGCGAGGTACAATTACGGCCCTAGCGCTTTTCAG  270
V  89.3% (216/242)  IGHV4-59*08  229  C.G.T........AG....G...T.T.....................G....A.........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  88.9% (8/9)      IGHD5-12*01  15   ---------------------------------------------------------------...G.....------------------  23

                                      -------------->                                  
                                       L  F  V  D  C  W  G  Q  G  K  V  V  A  F  S  S  
                    Query_1631   271  CTCTTCGTTGACTGCTGGGGCCAGGGAAAGGTGGTCGCCTTCTCCTCAG  319
J  85.7% (36/42)    IGHJ4*02     7    -------......A..............CCC.....A..G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_278305

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     1e-124
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_1632   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  98.3% (284/289)  IGHV5-51*01  6    .............................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_1632   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1632   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1632   271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_1632   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_181055

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           355     3e-100
IGHD3-16*02                                                                                           52.6    2e-11 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AG	ATTATGATTACGTTTGGGGGAGTTATC	TCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGATTATGATTACGTTTGGGGGAGTTATCTCCACTAC	AREDYDYVWGSYLHY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  F  D  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1633   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCGACAGTACTTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*02  49   ..................................C..T.....G...C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  E  D  T  S  K  N 
                    Query_1633   91   TGGATTGGATATATTAATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGAAGACACGTCCAAGAAC  180
V  96.3% (236/245)  IGHV4-59*02  139  ........G.....CT.........................................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  D  Y  D  Y  V  W  G  S 
                    Query_1633   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTACTACTGTGCGAGAGAAGATTATGATTACGTTTGGGGGAGT  270
V  96.3% (236/245)  IGHV4-59*02  229  ..................................................T..............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (27/27)   IGHD3-16*02  3    -------------------------------------------------------------------.......................  25

                                      ----------->                                  
                                       Y  L  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1633   271  TATCTCCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (27/27)   IGHD3-16*02  26   ....------------------------------------------  29
J  100.0% (39/39)   IGHJ4*02     10   -------.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_309715

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            329     3e-92
IGHD3-22*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAGG	ATTACTTTGATAGGAGT	CGTCACGACGAATT	CGGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCAGGATTACTTTGATAGGAGTCGTCACGACGAATTCGGTCTGGACGTC	ARDQDYFDRSRHDEFGLDV	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  D  S  F  S  G  D  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_1634   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCTTCAGTGGCGATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  92.3% (229/248)  IGHV4-4*02   49   ...............................G....A....CA.TAG...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  Y  D  S  G  G  T  N  Y  N  P  S  L  K  R  R  A  I  I  S  I  D  K  S  N 
                    Query_1634   91   GAGTGGATTGGGGAAGTCTATGATAGTGGGGGCACCAACTACAACCCGTCCCTCAAGAGGCGAGCCATCATATCAATAGACAAGTCCAAC  180
V  92.3% (229/248)  IGHV4-4*02   139  ...............A.....C........A............................T....T..C.......G.............G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       K  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  D  Y  F  D  R  S 
                    Query_1634   181  AAACAGTTCTCCCTAAAACTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGACCAGGATTACTTTGATAGGAGT  270
V  92.3% (229/248)  IGHV4-4*02   229  ..C...........G..G....G.............................................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  88.2% (15/17)    IGHD3-22*01  3    -------------------------------------------------------------------------......A......T...  19

                                      MGT----------------------->                                 
                                       R  H  D  E  F  G  L  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_1634   271  CGTCACGACGAATTCGGTCTGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  330
J  95.7% (44/46)    IGHJ6*02     17   --------------....A.......................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_309714

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	247	223	21	3	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_1635   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  87
V  90.3% (223/247)  IGHV4-4*02   49   ..................GC.........T...TCC......A..AG........GG.......................G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  K 
                    Query_1635   88   GAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCAAG  177
V  90.3% (223/247)  IGHV4-4*02   139  .......................T......A................................G.......A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G  W 
                    Query_1635   178  AATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGTGGGTAGCAGTGGCTGG  267
V  90.3% (223/247)  IGHV4-4*02   229  ..CC.GT..........G....GC..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-19*01  6    -----------------------------------------------------------------------------.............  18

                                      -------->                                
                                       L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_1635   268  CTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  308
J  95.0% (38/40)    IGHJ4*02     7    -......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_309717

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           332     3e-93
IGHD2-15*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	ACCCGTTTTGTCT	TGGCGGTAGATGC	ATCTCGGGCTTGAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACCCGTTTTGTCTTGGCGGTAGATGCATCTCGGGCTTGAGTGACTTC	ARDPFCLGGRCISGLSDF	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  P  F  S  G  H  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_1636   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGCCCTTCAGTGGTCACTACTGGAACTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  93.4% (228/244)  IGHV4-34*01  49   .........................A.......T...........T.........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  R  G  G  S  T  T  Y  N  P  S  L  K  S  Q  V  T  M  S  V  D  T  S  K  N 
                    Query_1636   91   TGGATTGGGGAAATCAATCGTGGTGGAAGCACCACCTACAACCCGTCCCTCAAGAGTCAAGTCACCATGTCTGTAGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-34*01  139  ...................A.A............A.......................G.........A..A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  F  C  L  G  G  R  C 
                    Query_1636   181  CAATTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGCGAGACCCGTTTTGTCTTGGCGGTAGATGC  270
V  93.4% (228/244)  IGHV4-34*01  229  ..G...........G....G...........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (11/13)    IGHD2-15*01  13   -----------------------------------------------------------------------------...T.....C...  25

                                      -------------------->                                  
                                       I  S  G  L  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1636   271  ATCTCGGGCTTGAGTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.6% (40/41)    IGHJ4*02     8    --------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_309716

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           352     3e-99
IGHD3-16*01                                                                                           18.0    0.65 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	283	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	70	4	0	94.6
CDR1-IMGT	76	99	24	17	7	0	70.8
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	282	114	95	13	6	83.3
CDR3-IMGT (germline)	283	288	6	6	0	0	100
Total	N/A	N/A	293	261	26	6	89.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P  
                    Query_1637   2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCC  91
V  89.1% (261/293)  IGHV5-51*03  2    ..G........................................................T.....A....T..........GC..TA..A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      R  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  
                    Query_1637   92   GTTATTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACA  181
V  89.1% (261/293)  IGHV5-51*03  92   .C..C........C.......................................................G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D  
                    Query_1637   182  GTCCGGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACA  265
V  89.1% (261/293)  IGHV5-51*03  182  .C...T.....C.A...................C...C........CAGCACC.C...............C..C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S  
                    Query_1637   266  CTGCCATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCTT  355
V  89.1% (261/293)  IGHV5-51*03  272  .C.....G........T......-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  91.7% (11/12)    IGHD3-16*01  18   ------------------------........T...------------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    -------------------------------------------......T......G.................A...............  47

                                         
                                      S  
                    Query_1637   356  CAG  358
J  94.0% (47/50)    IGHJ3*01     48   ...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_79428

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           344     6e-97
IGHD2-2*01                                                                                            35.3    4e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	ATTGTACTAGTACCAGGTGCTATG	GGGGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGACATTGTACTAGTACCAGGTGCTATGGGGGATTTGACTTC	TRHCTSTRCYGGFDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  S  L  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1638   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCAGCCTCAGTAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  94.4% (234/248)  IGHV3-64*01  47   .....................C..............C.T.......C......................................A....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  S  D  G  G  T  T  Y  Y  A  N  S  V  K  G  R  F  A  I  S  R  D  N  S  
                    Query_1638   91   AATATGTTTCAGCTATTAGTAGTGATGGGGGTACCACATATTATGCAAACTCTGTGAAGGGCAGATTCGCCATCTCCAGAGACAACTCCA  180
V  94.4% (234/248)  IGHV3-64*01  137  .......................A.........G..................................A................T....  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  F  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  T  R  H  C  T  S  T  R  C  
                    Query_1638   181  AGAACACGCTGTTCCTTCAAATGGGAAGCCTGAGAGCTGAGGACATGGCTGTCTATTACTGTACGAGACATTGTACTAGTACCAGGTGCT  270
V  94.4% (234/248)  IGHV3-64*01  227  ............AT...........C..........................G.........G.....----------------------  294
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  91.7% (22/24)    IGHD2-2*01   6    ---------------------------------------------------------------------......G.........C....  26

                                      ---------------->                                  
                                      Y  G  G  F  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_1638   271  ATGGGGGATTTGACTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  321
D  91.7% (22/24)    IGHD2-2*01   27   ...------------------------------------------------  29
J  95.3% (41/43)    IGHJ4*02     6    --------.......A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_79429

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           324     8e-91
IGHD3-3*01                                                                                            39.1    3e-07
IGHJ3*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTCGCCACG	TTACGATTTTTGGAATGGCTATTATA	TTACCAAAAAAGGA	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCGCCACGTTACGATTTTTGGAATGGCTATTATATTACCAAAAAAGGAGCTTTTGATATC	ARESPRYDFWNGYYITKKGAFDI	240	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  I  S  S  A  N  I  N  W  V  R  Q  P  P  G  K  G  L  
                    Query_1639   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCATCAGTAGCGCCAACATAAACTGGGTCCGCCAGCCTCCCGGGAAGGGGCTGG  90
V  91.9% (227/247)  IGHV3-53*01  47   ......................................G........AA.T....G.G.............G....A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  A  S  L  I  Y  N  G  G  I  T  S  Y  A  D  S  V  R  G  R  F  T  I  S  G  D  S  S  K  
                    Query_1639   91   AGTGGGCCTCACTTATTTATAATGGTGGTATTACATCCTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCGGAGACAGTTCCAAGA  180
V  91.9% (227/247)  IGHV3-53*01  137  ......T....G.........GC.......GC....A.................A...................A......A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------------C
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  M  Y  F  C  A  R  E  S  P  R  Y  D  F  W  
                    Query_1639   181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATGTATTTCTGTGCGAGAGAGTCGCCACGTTACGATTTTTGGA  270
V  91.9% (227/247)  IGHV3-53*01  227  ...............................................G......A............-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  92.3% (24/26)    IGHD3-3*01   4    ----------------------------------------------------------------------------..............  17

                                      DR3-IMGT----------------------------->                                  
                                      N  G  Y  Y  I  T  K  K  G  A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_1639   271  ATGGCTATTATATTACCAAAAAAGGAGCTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCCTCAG  342
D  92.3% (24/26)    IGHD3-3*01   18   G...T.......------------------------------------------------------------  29
J  95.7% (44/46)    IGHJ3*02     5    --------------------------...........................A.............T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_309713

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           329     3e-92
IGHD2-15*01                                                                                           12.2    32   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	ACCCGTTTTGTCT	TGGCGGTAG	ACGCATCTCGGGCTTGAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACCCGTTTTGTCTTGGCGGTAGACGCATCTCGGGCTTGAGTGACTTC	ARDPFCLGGRRISGLSDF	237	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	26	25	24	1	0	96
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	122	21	19	2	0	90.5
FR3-IMGT	123	236	114	106	8	0	93
CDR3-IMGT (germline)	237	243	7	6	1	0	85.7
Total	N/A	N/A	242	226	16	0	93.4


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        L  S  L  T  C  A  V  S  G  G  P  F  S  G  H  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E  W
                    Query_1640   2    CCTGTCCCTCACCTGCGCTGTCTCTGGTGGGCCCTTCAGTGGTCACTACTGGAACTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAGTG  91
V  93.4% (226/242)  IGHV4-34*01  51   .......................A.......T...........T.........G.............C......................  140
                                        L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W

                                      ---------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IM
                                        I  G  E  I  N  R  G  G  S  T  T  Y  N  P  S  L  K  S  Q  V  T  M  S  V  D  T  S  K  N  Q
                    Query_1640   92   GATTGGGGAAATCAATCGTGGTGGAAGCACCACCTACAACCCGTCCCTCAAGAGTCAAGTCACCATGTCTGTAGACACGTCCAAGAACCA  181
V  93.4% (226/242)  IGHV4-34*01  141  .................A.A............A.......................G.........A..A....................  230
                                        I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q

                                      GT----------------------------------------------------><----------------------CDR3-IMGT---
                                        F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  F  C  L  G  G  R  R  I
                    Query_1640   182  ATTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGCGAGACCCGTTTTGTCTTGGCGGTAGACGCAT  271
V  93.4% (226/242)  IGHV4-34*01  231  G...........G....G...........................G............A...----------------------------  292
                                        F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                              
D  88.9% (8/9)      IGHD2-15*01  13   ---------------------------------------------------------------------------...T.....------  21

                                      ------------------>                                  
                                        S  G  L  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1640   272  CTCGGGCTTGAGTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.6% (40/41)    IGHJ4*02     8    ------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_309712

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHD2-15*01                                                                                           21.8    0.039
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGC	AAAGTCT	GATATTGTAGT	CCC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGTCTGATATTGTAGTCCCTATGGACGTC	AKSDIVVPMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1641   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.0% (227/244)  IGHV3-21*01  47   .............................................G......C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  V  G  T  Y  I  E  Y  A  S  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_1641   91   AGTGGGTCTCGTACATTTCTAGTGTTGGTACTTACATAGAGTACGCAAGCTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  93.0% (227/244)  IGHV3-21*01  137  ..........A.C....AG....AG.A...G.......T.C......GA......................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  S  D  I  V  V  P  M  
                    Query_1641   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGCGCAAAGTCTGATATTGTAGTCCCTATGG  270
V  93.0% (227/244)  IGHV3-21*01  227  .........................................................A...T..--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD2-15*01  3    -----------------------------------------------------------------------...........--------  13
J  100.0% (43/43)   IGHJ6*02     20   -------------------------------------------------------------------------------------.....  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1641   271  ACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  308
J  100.0% (43/43)   IGHJ6*02     25   ......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_79425

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           366     2e-103
IGHD5-12*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GTGG	GTGGCTACGA	ATATCCGGGTTTGGTCGGGATTC	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTGGGTGGCTACGAATATCCGGGTTTGGTCGGGATTCACTCC	AVGGYEYPGLVGIHS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	260	26	0	90.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  R  P  G  S  S  V  K  V  S  C  L  T  S  G  G  S  F  S  S  F
                    Query_1642   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGTCCTCGGTGAAGGTCTCATGCTTGACTTCTGGAGGCAGCTTCAGCAGCTT  90
V  90.9% (260/286)  IGHV1-69*01  6    ..................G.............A........................C...AA.G............C...........A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  Q  A  P  G  Q  G  H  E  W  M  G  G  A  I  P  M  F  G  T  A  Q  Y  A  R
                    Query_1642   91   TGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCATGAGTGGATGGGAGGGGCCATCCCTATGTTTGGTACAGCACAGTACGCACG  180
V  90.9% (260/286)  IGHV1-69*01  96   ..C...................................T................AT.........C............A.C.......A  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  I  A  D  E  S  T  T  A  A  Y  M  E  M  S  C  L  K  S  E  D  S  A
                    Query_1642   181  GAAGTTCCAGGACAGAGTCACGATTATTGCGGACGAATCCACGACCGCAGCCTACATGGAGATGAGCTGCCTGAAATCTGAGGACTCGGC  270
V  90.9% (260/286)  IGHV1-69*01  186  ...........G..............CC................G.A..............C.....A......G..........A....  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  F  C  A  V  G  G  Y  E  Y  P  G  L  V  G  I  H  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1642   271  CGTGTATTTCTGTGCGGTGGGTGGCTACGAATATCCGGGTTTGGTCGGGATTCACTCCTGGGGCCAGGGAACCCTGGTCACTGTCTCCTC  360
V  90.9% (260/286)  IGHV1-69*01  276  ........A.......--------------------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                           
D  100.0% (10/10)   IGHD5-12*01  10   --------------------..........------------------------------------------------------------  19
J  94.9% (37/39)    IGHJ4*02     10   -----------------------------------------------------...A........................C........  46

                                        
                                        
                    Query_1642   361  AG  362
J  94.9% (37/39)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_79426

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            322     2e-90
IGHD3-22*01                                                                                           21.8    0.042
IGHJ2*01                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-22*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCAA	TGAA	GTATCACTTTGACATTAGTGGTT	CTGACC	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAATGAAGTATCACTTTGACATTAGTGGTTCTGACCGGTACTTCGATCTC	AMKYHFDISGSDRYFDL	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	226	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  G  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1643   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTGGAGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTAG  90
V  91.9% (226/246)  IGHV3-9*01   47   ....................................C.....AT............................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  V  D  W  N  G  D  S  I  D  Y  A  D  S  V  K  G  *  F  T  V  S  R  D  I  A  
                    Query_1643   91   AGTGGGTCTCAGGTGTTGATTGGAATGGTGATAGTATAGACTATGCGGACTCTGTGAAGGGCTGATTCACCGTCTCCAGAGACATCGCCA  180
V  91.9% (226/246)  IGHV3-9*01   137  ..............A..AG.......A...G...C....G......................C........A............A.....  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  K  S  L  F  L  Q  M  N  S  L  R  P  E  D  T  A  F  Y  Y  C  A  M  K  Y  H  F  D  I  S  
                    Query_1643   181  AGAAGTCCCTCTTTCTTCAAATGAACAGTCTGAGACCTGAGGACACGGCCTTCTATTACTGTGCAATGAAGTATCACTTTGACATTAGTG  270
V  91.9% (226/246)  IGHV3-9*01   227  ....C.....G.A...G..................G................G.............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  82.6% (19/23)    IGHD3-22*01  1    ----------------------------------------------------------------------....T...A...T.G.....  20

                                      GT-------------------->                                  
                                      G  S  D  R  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_1643   271  GTTCTGACCGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  327
D  82.6% (19/23)    IGHD3-22*01  21   ...------------------------------------------------------  23
J  100.0% (48/48)   IGHJ2*01     6    ---------................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_79427

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           427     1e-121
IGHD6-13*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              108     9e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TT	CAGCAGCTGG	CAAACCGGCTAACA	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCAGCAGCTGGCAAACCGGCTAACAATTACTTCTACTACTACGGTCTGGACGTC	ARHSAAGKPANNYFYYYGLDV	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	282	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_1644   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGTTA  90
V  96.9% (282/291)  IGHV5-51*01  6    ....................................C..................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  L  P  G  K  G  L  E  W  M  G  F  I  Y  P  G  D  S  H  T  K  Y  S  P
                    Query_1644   91   CTGGATCGGCTGGGTGCGCCAGCTGCCCGGGAAAGGCCTGGAGTGGATGGGATTCATCTATCCTGGTGACTCTCATACCAAATACAGCCC  180
V  96.9% (282/291)  IGHV5-51*01  96   ......................A............................GA....................G......G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_1644   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (282/291)  IGHV5-51*01  186  .......C...........................................................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        M  Y  Y  C  A  R  H  S  A  A  G  K  P  A  N  N  Y  F  Y  Y  Y  G  L  D  V  W  G  Q  G  T
                    Query_1644   271  CATGTATTACTGTGCGAGACATTCAGCAGCTGGCAAACCGGCTAACAATTACTTCTACTACTACGGTCTGGACGTCTGGGGCCAAGGGAC  360
V  96.9% (282/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------..........---------------------------------------------------------  18
J  96.8% (60/62)    IGHJ6*02     1    -----------------------------------------------......A.............A......................  43

                                                         
                                        T  V  T  V  S  S 
                    Query_1644   361  CACGGTCACCGTCTCCTCA  379
J  96.8% (60/62)    IGHJ6*02     44   ...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_309719

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           12.2    34   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GCCGCGAAAATCGGTCTTTGGACTACTTATCCC	TGGGGG	GGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCCGCGAAAATCGGTCTTTGGACTACTTATCCCTGGGGGGGGCGACTGGTTCGACCCC	ARGPRKSVFGLLIPGGGDWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  D  Y  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1645   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCGATTACTATTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (233/245)  IGHV4-34*01  49   .......................................AG.GGT..C..........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  G  A  T  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1645   91   TGGATTGGGGAAATCAATCATGGTGCAACGACCAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  .....................A...G..GC............C...............................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  K  S  V  F  G  L 
                    Query_1645   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGCCGCGAAAATCGGTCTTTGGACTA  270
V  95.1% (233/245)  IGHV4-34*01  229  ....................C............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      -IMGT--------------------------->                               
                                       L  I  P  G  G  G  D  W  F  D  P  W  G  Q  G  T  L  I  T  V  S  
                    Query_1645   271  CTTATCCCTGGGGGGGGCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCT  334
D  100.0% (6/6)     IGHD3-16*01  17   --------......--------------------------------------------------  22
J  97.8% (44/45)    IGHJ5*02     4    -------------------................................G............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_79421

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           339     2e-95
IGHD3-3*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCACGACTCC	TTACGAT	GACCCACGGAAGGCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCACGACTCCTTACGATGACCCACGGAAGGCATACTTTGACTAC	ARVTTPYDDPRKAYFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1646   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGCCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-30*03  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  P  Y  D  G  S  N  E  Y  Y  A  D  S  V  R  G  R  V  S  I  S  R  D  N  S  
                    Query_1646   91   AGTGGGTGGCCTTTATCCCATATGATGGAAGTAATGAATACTATGCAGACTCCGTGAGGGGCCGAGTCTCCATCTCCAGAGACAATTCCG  180
V  93.6% (233/249)  IGHV3-30*03  137  ..........AG....AT.................A.....................A.......T..A....................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      G  N  T  L  Y  L  H  M  H  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  T  T  P  Y  D  D  
                    Query_1646   181  GGAACACACTGTATCTGCATATGCACAGCCTGAGAGCTGAGGACACGGCTTTGTATTACTGTGCGAGAGTCACGACTCCTTACGATGACC  270
V  93.6% (233/249)  IGHV3-30*03  227  A......G...........A...A..........................G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-3*01   4    -------------------------------------------------------------------------------.......----  10

                                      GT-------------------->                                  
                                      P  R  K  A  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_1646   271  CACGGAAGGCATACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  327
J  97.8% (45/46)    IGHJ4*02     3    -----------...................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_79422

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           248     8e-68
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	ARGLLIEDPNYVWGSFRRNHNCYTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	92	22	0	80.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	201	43	0	82.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  R  L  E 
                    Query_1647   1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGAGACTGGAG  90
V  82.4% (201/244)  IGHV4-59*01  49   ..................A....C.......G.......A...G..........AG....A.C........C.......A.G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_1647   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  82.4% (201/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  N  Y 
                    Query_1647   181  CAGTTGTCTCTCAACCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCAACTAT  270
V  82.4% (201/244)  IGHV4-59*01  229  .....C..C..G..G....G.TCT.....................GT.....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_1647   271  GTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  94.7% (36/38)    IGHJ3*01     13   --------------------------------------...................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_79423

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         353     9e-100
IGHD4-17*01                                                                                           21.8    0.041 
IGHJ5*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGACTACGGTG	GTCCCTCCTATTT	GTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATGACTACGGTGGTCCCTCCTATTTGTTCGACCCC	VRDDYGGPSYLFDP	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	253	8	7	1	0	87.5
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  R  G  
                    Query_1648     4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAGGGGCC  93
V  95.2% (238/250)  IGHV4-30-2*01  50   .....TCC...A........................................................................A.....  139
                                           L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  S  Y  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  
                    Query_1648     94   TGGAGTGGATTGGGTACATCTATCATAGTGGGAGCTCCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCAATAGACACGTCCA  183
V  95.2% (238/250)  IGHV4-30-2*01  140  ...................................A.....................................A...G......G.....  229
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  

                                        -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  D  D  Y  G  G  P  S  
                    Query_1648     184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGTCAGAGATGACTACGGTGGTCCCTCCT  273
V  95.2% (238/250)  IGHV4-30-2*01  230  ....................................................G.....C....C......--------------------  299
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD4-17*01    1    ----------------------------------------------------------------------...........---------  11

                                        ------------->                                
                                        Y  L  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1648     274  ATTTGTTCGACCCCTGGGGCCAGGGAACCCTCGTCACCGTCTCCTC  319
J  97.6% (41/42)    IGHJ5*02       8    ----...........................G..............  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_156645

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           296     2e-82
IGHD2-2*01                                                                                            21.8    0.041
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACAAACTGCTA	CTATCAA	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACAAACTGCTACTATCAAATGGACGTC	ARVDCSSTNCYYQMDV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	216	27	0	88.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  H  G  Q  G  L  E  
                    Query_1649   4    CCCTGAGACTCTCCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCACGGGCAGGGACTGGAGT  93
V  88.9% (216/243)  IGHV4-59*01  50   .....TCC...A................T..........G.AG.T...........................CA...A............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  N  N  
                    Query_1649   94   GGGTTGGATATATCTATTATAGAGGGAGTACTAAGTACAACCCCTCCCTCAAGGGTCGGGTCACCATATCAGTAGACACGTCCAACAATG  183
V  88.9% (216/243)  IGHV4-59*01  140  ..A....G...........C..T.....C..C..C..................A....A..........................G..CC  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  N  C  Y  
                    Query_1649   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACAAACTGCTACT  273
V  88.9% (216/243)  IGHV4-59*01  230  ..............................CT..............G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  85.0% (17/20)    IGHD2-2*01   8    --------------------------------------------------------------------........T..C.G......--  27

                                      ------------->                                 
                                      Y  Q  M  D  V  W  G  R  G  T  K  V  I  V  S  S 
                    Query_1649   274  ATCAAATGGACGTCTGGGGCCGAGGGACCAAGGTCATCGTCTCCTCA  320
J  92.9% (39/42)    IGHJ6*02     21   -----................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_181058

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD2-2*01                                                                                            10.3    137   
IGHJ3*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTGAAGTCTTT	TACCA	CCGAG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATATC	ASLKSFTTEDAFDI	290	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	74	0	0	100
CDR1-IMGT	77	100	24	18	6	0	75
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	110	4	0	96.5
CDR3-IMGT (germline)	290	294	5	5	0	0	100
Total	N/A	N/A	292	279	13	0	95.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  
                    Query_1650   3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATTCGACTTTACCA  92
V  95.5% (279/292)  IGHV5-51*01  2    ..............................................................................A.AG........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  S  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  D  D  S  D  T  R  Y  
                    Query_1650   93   CCTCTTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAATGGATGGGGGTCATCTATCCTGATGACTCTGATACCAGATACA  182
V  95.5% (279/292)  IGHV5-51*01  92   G..AC.........................................G.........A............G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  S  A  Y  L  Q  W  G  S  L  K  A  S  D  
                    Query_1650   183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACAGTGCCTACCTGCAGTGGGGCAGCCTGAAGGCCTCGGACA  272
V  95.5% (279/292)  IGHV5-51*01  182  ................................................G..CC...............A.....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  A  S  L  K  S  F  T  T  E  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  
                    Query_1650   273  CCGCCATGTATTACTGTGCGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTT  362
V  95.5% (279/292)  IGHV5-51*01  272  ......................--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (5/5)     IGHD2-2*01   16   ----------------------------------.....---------------------------------------------------  20
J  100.0% (49/49)   IGHJ3*02     2    --------------------------------------------..............................................  47

                                         
                                      S  
                    Query_1650   363  CAG  365
J  100.0% (49/49)   IGHJ3*02     48   ...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_156647

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           324     8e-91
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTGTACGAGGCGACTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATGTGTACGAGGCGACTCATCAATATAGTGGCTACATGATTAATGACTAC	GKDVYEATHQYSGYMINDY	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	126	24	19	5	0	79.2
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	248	8	7	1	0	87.5
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  S  K  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_1651   2    CCCTGTCCCTCACCTGCGCAGCCTCTGGATTCACCTTTAGCAAGTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAAT  91
V  91.9% (227/247)  IGHV3-23*01  50   .....AGA...T....T.........................GC............................................G.  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  G  I  S  E  S  G  A  S  T  N  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_1651   92   GGGTCTCAGGTATCAGTGAGAGCGGTGCTAGCACAAATCACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGA  181
V  91.9% (227/247)  IGHV3-23*01  140  .........C...T....GT..T....G.......T.CT...................................................  229
                                      W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------CDR3-IM
                                      N  T  L  Y  L  Q  M  I  S  L  R  V  E  D  T  A  V  Y  Y  C  G  K  D  V  Y  E  A  T  H  Q  
                    Query_1651   182  ACACGCTGTATCTGCAAATGATCAGCCTGAGAGTCGAGGACACGGCCGTATATTACTGTGGGAAAGATGTGTACGAGGCGACTCATCAAT  271
V  91.9% (227/247)  IGHV3-23*01  230  .....................A...........C..........................C......-----------------------  296
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                          
D  100.0% (13/13)   IGHD5-12*01  5    ----------------------------------------------------------------------------------------..  6

                                      GT----------------------->                                  
                                      Y  S  G  Y  M  I  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1651   272  ATAGTGGCTACATGATTAATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  100.0% (13/13)   IGHD5-12*01  7    ...........-------------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_156646

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           316     2e-88
IGHD3-10*01                                                                                           16.1    2.4  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTAGA	TCGTCGGCTTTCCTCCCCCCGAGCGC	GTTCGGGG	GGGTCTATTATTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCTAGATCGTCGGCTTTCCTCCCCCCGAGCGCGTTCGGGGGGGTCTATTATTTCTACGGTCTGGACGTC	SRSSAFLPPSAFGGVYYFYGLDV	249	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	102	12	0	89.5
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	228	26	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  S  G  S  D  M  N  W  V  R  Q  A  S  G  K  G  L  
                    Query_1652   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGGTTCAGTGGCTCTGATATGAACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  89.8% (228/254)  IGHV3-73*01  47   .........A.....................G....CC.............C....C.................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  R  V  G  H  I  R  S  K  A  N  N  Y  A  T  A  Y  A  E  S  M  K  G  R  F  I  I  S  R  D  
                    Query_1652   91   AGCGGGTTGGCCATATCAGAAGCAAAGCCAACAATTATGCGACTGCCTACGCTGAGTCCATGAAAGGCAGGTTCATCATCTCCAGAGATG  180
V  89.8% (228/254)  IGHV3-73*01  137  ..T.........G...T...........T....G...C.....A..A..T....C...GG...............C..............  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  E  N  T  A  Y  L  Q  M  D  S  L  Q  T  E  D  T  A  V  Y  Y  C  S  R  S  S  A  F  L  
                    Query_1652   181  ACTCAGAGAACACGGCGTATCTGCAAATGGACAGCCTACAAACCGAGGACACGGCCGTCTATTACTGTTCTAGATCGTCGGCTTTCCTCC  270
V  89.8% (228/254)  IGHV3-73*01  227  .T...A.......................A.......GA...................G.........A.....----------------  300
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 

                                      --------CDR3-IMGT----------------------------->                                
                                      P  P  S  A  F  G  G  V  Y  Y  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_1652   271  CCCCGAGCGCGTTCGGGGGGGTCTATTATTTCTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  349
D  100.0% (8/8)     IGHD3-10*01  12   ----------........-------------------------------------------------------------  19
J  97.9% (47/48)    IGHJ6*02     14   -------------------------------.......A........................................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_156640

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           406     1e-115
IGHD1-26*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GAGTTCCCCCAGC	GGGAGCTACT	CC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGACAGGAGTTCCCCCAGCGGGAGCTACTCCCTACTACGGTATGGATGTC	TTGVPPAGATPYYGMDV	286	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	72	72	71	1	0	98.6
CDR1-IMGT	73	96	24	22	2	0	91.7
FR2-IMGT	97	147	51	49	2	0	96.1
CDR2-IMGT	148	171	24	24	0	0	100
FR3-IMGT	172	285	114	105	9	0	92.1
CDR3-IMGT (germline)	286	292	7	5	2	0	71.4
Total	N/A	N/A	292	276	16	0	94.5


Alignments

                                      <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                       V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  R 
                    Query_1653   1    GTTCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGA  90
V  94.5% (276/292)  IGHV1-69*01  4    ..G......................................................................................C  93
                                       V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S 

                                      -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                       F  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  I  P  I  F  G  T  A  N  Y  A 
                    Query_1653   91   TTTGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGCATCATCCCTATCTTTGGTACAGCAAACTACGCA  180
V  94.5% (276/292)  IGHV1-69*01  94   .A....................................................G.G.................................  183
                                       Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A 

                                      --------------------------------------------FR3-IMGT--------------------------------------
                                       Q  R  F  Q  G  R  V  T  L  T  A  V  E  S  T  S  T  A  Y  M  E  L  S  S  L  K  S  E  D  T 
                    Query_1653   181  CAGAGGTTCCAGGGCAGAGTCACACTTACCGCGGTCGAGTCCACGAGCACAGCCTACATGGAACTGAGCAGCCTGAAATCTGAGGACACG  270
V  94.5% (276/292)  IGHV1-69*01  184  ....A..................GA.........A...A.......................G.............G.............  273
                                       Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T 

                                      --------------><--------------------CDR3-IMGT-------------------->                        
                                       A  V  L  Y  C  T  T  G  V  P  P  A  G  A  T  P  Y  Y  G  M  D  V  W  G  Q  G  T  A  V  T 
                    Query_1653   271  GCCGTGCTTTACTGTACGACAGGAGTTCCCCCAGCGGGAGCTACTCCCTACTACGGTATGGATGTCTGGGGCCAAGGGACCGCGGTCACC  360
V  94.5% (276/292)  IGHV1-69*01  274  ......TA.......G...G..--------------------------------------------------------------------  295
                                       A  V  Y  Y  C  A  R                                                                      
D  100.0% (10/10)   IGHD1-26*01  9    -----------------------------------..........---------------------------------------------  18
J  96.2% (50/52)    IGHJ6*02     11   -----------------------------------------------...............C..................A........  53

                                               
                                       V  S  S 
                    Query_1653   361  GTCTCCTCA  369
J  96.2% (50/52)    IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_156643

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           307     1e-85
IGHD3-16*01                                                                                           12.2    32   
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	CTC	ATTACG	GCCTTTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGACTCATTACGGCCTTTGGACTACTTCACCTACGGTTTGGACGTC	ATDSLRPLDYFTYGLDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  G  F  G  M  H  W  V  R  Q  A  P  G  T  G  L  
                    Query_1654   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCACCTTCGGTGGCTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCACGGGGCTGG  90
V  89.2% (223/250)  IGHV3-30*03  47   ......................A..................A..A...A................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  D  D  T  Y  D  Q  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_1654   91   AATGGGTGGCACTTATATCATATGATGATACTTACGATCAGTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGATTCCA  180
V  89.2% (223/250)  IGHV3-30*03  137  .G.........G...............GA.G.A.TA.AT.C..........................................A......  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  V  F  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  F  C  A  T  D  S  L  R  P  L  D  
                    Query_1654   181  AGAACACGGTGTTTCTACAGATGAACAGTTTGAGACCTGAGGACACGGCTGTCTATTTCTGTGCGACAGACTCATTACGGCCTTTGGACT  270
V  89.2% (223/250)  IGHV3-30*03  227  ........C...A...G..A........CC.....G................G....A........G...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  9    -------------------------------------------------------------------------......-----------  14
J  93.2% (55/59)    IGHJ6*02     4    ---------------------------------------------------------------------------------------...  6

                                      GT-------------------->                                 
                                      Y  F  T  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1654   271  ACTTCACCTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  93.2% (55/59)    IGHJ6*02     7    ...A.TA.......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_181059

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           374     7e-106
IGHD3-3*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	242	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1655   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (242/245)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_1655   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.8% (242/245)  IGHV4-34*01  139  .........................................................................T................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_1655   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  98.8% (242/245)  IGHV4-34*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1655   271  GCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_329858

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            307     1e-85
IGHD2-21*02                                                                                           18.0    0.58 
IGHJ3*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAGGAGTCAGCA	GGTGGTGAC	AGGGCG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCAGGAGTCAGCAGGTGGTGACAGGGCGGCTTTTGATATC	ARDQESAGGDRAAFDI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	46	5	0	90.2
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	100	14	0	87.7
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	222	26	0	89.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  K  S  N  W  W  F  W  V  R  Q  S  P  G  K  G  L 
                    Query_1656   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGGGGCTCCATCAGTAAAAGTAACTGGTGGTTTTGGGTCCGCCAGTCCCCGGGGAAGGGGCTG  90
V  89.5% (222/248)  IGHV4-4*01   49   ..................G..........T...........C.GT............AG.............C....A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  K  I  Y  H  S  G  T  T  D  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  K  S  R 
                    Query_1656   91   GAGTGGATTGGGAAAATCTACCATAGTGGGACCACCGACTACAACCCGTCCCTCAAGAGTCGAGTCACTATGTCAGTTGACAAGTCGAGG  180
V  89.5% (222/248)  IGHV4-4*01   139  ............G.......T..........G....A...............................C..A.....A........C.A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  S  F  S  L  K  L  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  D  Q  E  S  A  G  G  D 
                    Query_1656   181  AACTCTTTCTCCCTGAAGTTGAGGTCTGTGACCGCCGCGGACACGGCCATATATTTCTGTGCGAGAGACCAGGAGTCAGCAGGTGGTGAC  270
V  89.5% (222/248)  IGHV4-4*01   229  ...CAG............C....C........................G.G....G............----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (9/9)     IGHD2-21*02  11   ---------------------------------------------------------------------------------.........  19

                                      ----------------->                                  
                                       R  A  A  F  D  I  W  G  R  G  T  M  V  I  V  S  S  
                    Query_1656   271  AGGGCGGCTTTTGATATCTGGGGCCGAGGGACAATGGTCATCGTCTCTTCAG  322
J  95.7% (44/46)    IGHJ3*02     5    ------...................A..............C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_156649

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         386     1e-109
IGHD4-4*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTCGAGTGGAATCGAGTGAC	ACTACAGT	CCTTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCGAGTGGAATCGAGTGACACTACAGTCCTTCCTGACTCG	ATRVESSDTTVLPDS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	267	20	0	93


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  T  F  T  D  S
                    Query_1657     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACACCTTTACTGATTC  90
V  93.0% (267/287)  IGHV5-10-1*01  6    .............................................................................G......CAGC.A  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  N  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  K  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_1657     91   CTGGATCAACTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGAAAAATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  93.0% (267/287)  IGHV5-10-1*01  96   ........G.............A............................G.GG...................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  M  S  I  D  T  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1657     181  GTCCTTCCAAGGCCACGTCACCATGTCTATTGACACGTCCATCAGCACTGCCTTCCTGCAGTGGAGCAGCTTGAAGGCCTCGGACACCGC  270
V  93.0% (267/287)  IGHV5-10-1*01  186  ........................C..AGC.....A.................A................C...................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          I  Y  F  C  A  T  R  V  E  S  S  D  T  T  V  L  P  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1657     271  CATATATTTCTGTGCGACTCGAGTGGAATCGAGTGACACTACAGTCCTTCCTGACTCGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  93.0% (267/287)  IGHV5-10-1*01  276  ...G....A........-------------------------------------------------------------------------  292
                                          M  Y  Y  C  A                                                                           
D  100.0% (8/8)     IGHD4-4*01     3    -------------------------------------........---------------------------------------------  10
J  94.9% (37/39)    IGHJ4*02       8    ---------------------------------------------------.....AC................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_156648

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           349     2e-98
IGHD3-9*01                                                                                            29.5    2e-04
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	CCGAG	TGACTGGTTATTATA	GCGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGCCGAGTGACTGGTTATTATAGCGGC	ASRVTGYYSG	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1658   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACCTTCAGTAACTACTGGATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.1% (235/247)  IGHV3-74*01  47   ...............................A.............G........................A...................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  A  S  R  I  N  S  Y  G  T  T  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1658   91   TGTGGGCCTCACGTATCAATAGTTATGGGACTACCACAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.1% (235/247)  IGHV3-74*01  137  ......T.........T......G......G..G.....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  R  V  T  G  Y  Y  S  
                    Query_1658   181  AGAACACGCTGTATCTGCAGATGAACAGTCTGAGAGCCGAGGACACGGCTGTATACTACTGTGCAAGCCGAGTGACTGGTTATTATAGCG  270
V  95.1% (235/247)  IGHV3-74*01  227  ...................A................................G..T...........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (15/15)   IGHD3-9*01   15   ------------------------------------------------------------------------...............---  29

                                      ->                                  
                                      G  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1658   271  GCTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  306
J  97.1% (34/35)    IGHJ4*02     14   -..................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_329859

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           336     1e-94
IGHD3-3*01                                                                                            10.3    117  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATC	GAGTG	CCCTTCCAATTTG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCGAGTGCCCTTCCAATTTGACGGTATGGACGTC	ARNRVPFQFDGMDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1659   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTTCTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.2% (229/243)  IGHV4-59*08  49   .......................................A..AG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  N  G  Y  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_1659   91   TGGATTGGCTATATGTATTACAATGGGTACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGTCCAAGAAC  180
V  94.2% (229/243)  IGHV4-59*08  139  ........G.....C.......G....AG.......................................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       L  F  S  L  M  L  T  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  N  R  V  P  F  Q  F  D  G 
                    Query_1659   181  CTGTTCTCCCTGATGCTGACCTCTGTGACCTCCGCAGACACGGCCGTGTATTACTGTGCGAGAAATCGAGTGCCCTTCCAATTTGACGGT  270
V  94.2% (229/243)  IGHV4-59*08  229  .A...........A.....G..........G................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-3*01   16   -------------------------------------------------------------------.....------------------  20
J  95.7% (45/47)    IGHJ6*02     16   -------------------------------------------------------------------------------------.....  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_1659   271  ATGGACGTCTGGGGCCAAGGGACGACGGTCAGCGTCTCCTCA  312
J  95.7% (45/47)    IGHJ6*02     21   .......................C.......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_302083

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           392     2e-111
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*01                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGC	TAGTAGTGTTTATTAC	AGAGATGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGCTAGTAGTGTTTATTACAGAGATGGCTTTGACTAC	ARGASSVYYRDGFDY	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	46	5	0	90.2
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	110	4	0	96.5
CDR3-IMGT (germline)	291	295	5	4	1	0	80
Total	N/A	N/A	293	272	21	0	92.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  V  E  V  K  K  P  G  T  S  V  K  V  S  C  K  A  S  G  Y  T  F  D 
                    Query_1660   3    CAGGTTCAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGACCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTGAT  92
V  92.8% (272/293)  IGHV1-18*01  1    .........................C...................G.........................................ACC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       A  Y  G  I  N  W  V  R  Q  A  P  R  Q  G  L  E  W  V  G  W  I  N  T  Y  T  G  D  T  N  Y 
                    Query_1660   93   GCCTATGGTATCAACTGGGTGCGACAGGCCCCTCGACAAGGACTTGAGTGGGTGGGTTGGATCAACACTTACACTGGTGACACAAACTAT  182
V  92.8% (272/293)  IGHV1-18*01  91   AG...........G...................G.......G.........A....A.......G.G......A....A...........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  R  L  R  Y  D  D 
                    Query_1660   183  GCACAGAATCTCCAGGGCAGAGTCACCATGACCACTGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGACTGAGATATGACGAC  272
V  92.8% (272/293)  IGHV1-18*01  181  ........G..........................A......................................C.......C.......  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  R  G  A  S  S  V  Y  Y  R  D  G  F  D  Y  W  G  H  G  T  L  V  T  V 
                    Query_1660   273  ACGGCCGTGTATTACTGTGCCAGGGGGGCTAGTAGTGTTTATTACAGAGATGGCTTTGACTACTGGGGCCACGGAACCCTGGTCACCGTC  362
V  92.8% (272/293)  IGHV1-18*01  271  ....................G..-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  93.8% (15/16)    IGHD3-22*01  13   -----------------------------........G.......---------------------------------------------  28
J  97.7% (43/44)    IGHJ4*01     5    -----------------------------------------------------..................A..................  41

                                             
                                       S  S  
                    Query_1660   363  TCCTCAG  369
J  97.7% (43/44)    IGHJ4*01     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_79997

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           402     3e-114
IGHD2-21*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	ATTTTGGTGG	ATAGAGATAGAGTTCC	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTC	ARGGFWWIEIEFRMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  Y 
                    Query_1661   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACCGACTAT  91
V  94.5% (273/289)  IGHV1-18*01  7    .............................................................................C......AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  A  G  W  I  S  A  Y  T  G  N  T  K  N  A  Q 
                    Query_1661   92   GGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGCGGGATGGATCAGCGCTTACACTGGTAATACAAAAAATGCACAA  181
V  94.5% (273/289)  IGHV1-18*01  97   .......G.....................................AT....................A......C.....CT.......G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  V  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_1661   182  AAAGTCCAGGGCAGAGTGACCATGACCACAGACACATCCACGAGAACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.5% (273/289)  IGHV1-18*01  187  ..GC.............C..........................C...............C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  G  G  F  W  W  I  E  I  E  F  R  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_1661   272  GTGTATTACTGTGCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  361
V  94.5% (273/289)  IGHV1-18*01  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD2-21*01  6    -----------------------...G......---------------------------------------------------------  15
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------.........................................  59

                                         
                                       S 
                    Query_1661   362  TCA  364
J  100.0% (44/44)   IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_238981

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           392     2e-111
IGHD6-19*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAGTACCAA	ATAGCAGT	CCAATACCCACC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCCAGTACCAAATAGCAGTCCAATACCCACCCTTTGACTTC	VRGQYQIAVQYPPFDF	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	17	7	0	70.8
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	295	7	6	1	0	85.7
Total	N/A	N/A	295	273	22	0	92.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  T  L  S  C  A  A  S  G  F  S  L  T 
                    Query_1662   1    CAGGTTCAGCTGGTGCAGTCTGGAGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGACACTCTCCTGTGCAGCCTCTGGATTCAGCTTGACT  90
V  92.5% (273/295)  IGHV3-30*03  1    .....G.........G.......G...............................G..........................C...C.G.  90
                                       Q  V  Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  A  M  Y  W  V  R  Q  A  P  G  K  G  P  E  W  V  A  L  I  S  Y  H  G  S  N  K  F  Y 
                    Query_1662   91   GACTATGCAATGTACTGGGTCCGCCAGGCTCCAGGCAAGGGGCCGGAGTGGGTGGCCCTTATATCATATCATGGAAGTAATAAATTCTAT  180
V  92.5% (273/295)  IGHV3-30*03  91   AG.....GC...C..............................T............AG...........G...............A....  180
                                       S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  K  S  T  L  Y  L  Q  M  N  S  L  R  A  E  D 
                    Query_1662   181  GCAGACTCCGTGAAGGGCCGATTTACCATCTCCAGAGACATTTCCAAGAGCACGCTATATCTGCAAATGAACAGCCTGAGAGCTGAGGAC  270
V  92.5% (273/295)  IGHV3-30*03  181  .......................C................A........A......G.................................  270
                                       A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  V  R  G  Q  Y  Q  I  A  V  Q  Y  P  P  F  D  F  W  G  Q  G  T  L  A  P 
                    Query_1662   271  ACGGCTGTGTATTACTGTGTGAGAGGCCAGTACCAAATAGCAGTCCAATACCCACCCTTTGACTTCTGGGGCCAGGGAACCCTGGCCCCC  360
V  92.5% (273/295)  IGHV3-30*03  271  ...................C.....-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (8/8)     IGHD6-19*01  5    ------------------------------------........----------------------------------------------  12
J  93.2% (41/44)    IGHJ4*02     5    --------------------------------------------------------........A....................T.A..  38

                                                
                                       V  S  S  
                    Query_1662   361  GTCTCCTCAG  370
J  93.2% (41/44)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_298974

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           325     3e-91
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGCG	GGCTGG	G	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCTGGGAACTGGTTCGACCCC	ARGRRAGNWFDP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  V  P  G  K  G 
                    Query_1663   1    ACCCTGTCCCTCACCTGCAGTGTCTCAGGTGGCTCCATCAGTAGTGGGGCTTACTACTGGAGTTGGATCCGCCAGGTCCCAGGGAAGGGC  90
V  91.6% (229/250)  IGHV4-31*01  49   ...................C......T..............C.....T.G............C............CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  E  N  T  Q  Y  N  P  S  L  K  S  L  V  T  I  S  G  D  T  S 
                    Query_1663   91   CTGGAGTGGATTGGATACATCTATTACGGTGAGAATACCCAGTACAACCCGTCCCTCAAGAGTCTGGTTACCATATCAGGAGACACCTCT  180
V  91.6% (229/250)  IGHV4-31*01  139  ..............G............A...G..GC...T.C.......................A.............T......G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       T  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  W 
                    Query_1663   181  ACGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCTGGGAACTGG  270
V  91.6% (229/250)  IGHV4-31*01  229  .A.................A.................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------......-------  18
J  91.8% (45/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  D  P  W  G  H  G  I  P  V  T  V  T  S  
                    Query_1663   271  TTCGACCCCTGGGGCCACGGAATCCCGGTCACCGTCACCTCAG  313
J  91.8% (45/49)    IGHJ5*02     9    .................G....C..T..........T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_30774

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           299     2e-83
IGHD4-4*01                                                                                            19.9    0.15 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATCAGC	CAGTAACTAC	TCTCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCAGCCAGTAACTACTCTCGGCTAC	ARNQPVTTLGY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	245	218	27	0	89


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  R  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1664   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCGTTCAGTAGATACACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.0% (218/245)  IGHV3-53*01  47   ...............................G...A.CG.......CA..TA.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  L  S  V  M  Y  S  R  G  A  T  R  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  S  S  K  
                    Query_1664   91   AGTGGCTCTCAGTCATGTATAGTCGTGGAGCCACAAGGTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  89.0% (218/245)  IGHV3-53*01  137  .....G.......T..T.....CG....TAG....TAC................A..........................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      N  T  V  Y  L  Q  M  K  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  N  Q  P  V  T  T  L  G  
                    Query_1664   181  ACACGGTGTATCTTCAAATGAAAAACCTGAGAGTCGAGGACACGGCCGTCTATTACTGTGCGAGAAATCAGCCAGTAACTACTCTCGGCT  270
V  89.0% (218/245)  IGHV3-53*01  227  .....C................C.G........C...............G...............-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (10/10)   IGHD4-4*01   7    ------------------------------------------------------------------------..........--------  16
J  97.4% (37/38)    IGHJ4*02     11   ----------------------------------------------------------------------------------------..  12

                                      ->                                  
                                      Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_1664   271  ACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.4% (37/38)    IGHJ4*02     13   .........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_236883

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD3-3*01                                                                                            23.8    0.011
IGHJ5*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCTGTCCCGC	ATTATGGTTTTTGGAATGATTATT	CCAAAATCTAACTCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTGTCCCGCATTATGGTTTTTGGAATGATTATTCCAAAATCTAACTCTTTCGACACC	ARGLSRIMVFGMIIPKSNSFDT	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  Y  G  G  S  F  N  G  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1665   1    ACCCTGTCCCTCACCTGCTCTGTCTATGGTGGGTCGTTCAATGGTCACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  92.2% (226/245)  IGHV4-34*01  49   ..................G................C....G....T............................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  D  T  N  Y  N  S  S  L  K  S  R  V  T  L  S  V  D  T  S  R  N 
                    Query_1665   91   TGGATTGGGGAAATTTCTCATAGTGGAGACACCAACTACAACTCGTCCCTCAAGAGTCGAGTCACCTTGTCAGTTGACACGTCCAGGAAC  180
V  92.2% (226/245)  IGHV4-34*01  139  ..............CAA..........AG.............C.......................A.A.....A..........A....  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  T  S  L  T  V  A  D  T  A  V  Y  Y  C  A  R  G  L  S  R  I  M  V  F  G 
                    Query_1665   181  CAGTTCTCCCTGAAGCTGACCTCCCTGACCGTCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCCTGTCCCGCATTATGGTTTTTGGA  270
V  92.2% (226/245)  IGHV4-34*01  229  ...................G...TG......C...............G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  83.3% (20/24)    IGHD3-3*01   3    ---------------------------------------------------------------------------....C.A........  17

                                      -IMGT--------------------------->                                  
                                       M  I  I  P  K  S  N  S  F  D  T  W  G  P  G  T  L  V  T  V  S  S  
                    Query_1665   271  ATGATTATTCCAAAATCTAACTCTTTCGACACCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  337
D  83.3% (20/24)    IGHD3-3*01   18   G..G.....----------------------------------------------------------  26
J  95.3% (41/43)    IGHJ5*02     9    ------------------------......C.........A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_331450

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           338     4e-95
IGHD1-1*01                                                                                            16.1    2.1  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	AAACA	ACAACTGG	CGC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCAGAAAACAACAACTGGCGCAC	TRKQQLAH	249	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	235	19	0	92.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  C  S  G  F  A  F  A  D  D  A  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_1666   1    GGTCCCTGAGACTCTCCTGTACATGTTCTGGATTCGCCTTTGCTGATGATGCTATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.5% (235/254)  IGHV3-49*04  47   .......................GC..........A......G....T........A.................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  A  V  I  R  S  K  N  Y  D  G  T  T  E  F  A  A  S  V  K  G  R  F  A  I  S  R  D  
                    Query_1666   91   AGTGGGTAGCCGTCATCAGAAGCAAAAATTATGATGGGACAACAGAATTTGCCGCGTCTGTGAAAGGCAGATTCGCCATCTCAAGAGATG  180
V  92.5% (235/254)  IGHV3-49*04  137  .........GTT....T.........GC.....G..............AC........................A...............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------CDR3-IMGT-----
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  K  Q  Q  L  A  
                    Query_1666   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAAGACACAGCCGTGTATTATTGTACCAGAAAACAACAACTGGCGC  270
V  92.5% (235/254)  IGHV3-49*04  227  ..............................................G.................C.....T...----------------  300
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (8/8)     IGHD1-1*01   4    -------------------------------------------------------------------------------........---  11

                                      ->                                  
                                      H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1666   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (36/36)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_185891

Length=318
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-13*04                                                                                           339     1e-95
IGHD1-1*01                                                                                            10.3    111  
IGHJ1*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-13*04	IGHD1-1*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TG	ACGAC	CTAA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGACGACCTAAAC	AKDDDLN	240	260	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	247	8	6	2	0	75
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  D  M  H  W  V  R  Q  T  T  G  K  G  L  
                    Query_1667   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGGCTCCGACATGCACTGGGTCCGCCAAACCACAGGAAAAGGTCTGG  90
V  93.9% (232/247)  IGHV3-13*04  47   ............................................A...A......................G.T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  D  M  H  W  V  R  Q  A  T  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  G  G  G  G  D  T  Y  Y  P  D  S  V  K  G  R  F  T  I  S  R  E  D  A  K  
                    Query_1667   91   AATGGGTCTCTGCTATTGGTGGTGGTGGTGACACATACTATCCAGACTCCGTCAAGGGCCGATTCACCATCTCCAGAGAAGATGCCAAGA  180
V  93.9% (232/247)  IGHV3-13*04  137  ..........A.........AC..C....................G......G...........................A.........  226
                                      E  W  V  S  A  I  G  T  A  G  D  T  Y  Y  P  G  S  V  K  G  R  F  T  I  S  R  E  N  A  K  

                                      3-IMGT----------------------------------------------------><-----CDR3-IMGT----->          
                                      N  S  L  Y  L  Q  M  N  N  L  R  A  G  D  T  A  V  Y  Y  C  A  K  D  D  D  L  N  W  G  Q  
                    Query_1667   181  ACTCCTTGTATCTTCAAATGAACAACCTGAGAGCCGGGGACACGGCTGTGTATTACTGCGCGAAAGATGACGACCTAAACTGGGGCCAGG  270
V  93.9% (232/247)  IGHV3-13*04  227  ........................G.................................T..A.G...-----------------------  293
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (5/5)     IGHD1-1*01   13   ---------------------------------------------------------------------.....----------------  17
J  100.0% (36/36)   IGHJ1*01     17   ------------------------------------------------------------------------------............  28

                                                              
                                      G  T  L  V  T  V  S  S  
                    Query_1667   271  GCACCCTGGTCACCGTCTCCTCAG  294
J  100.0% (36/36)   IGHJ1*01     29   ........................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30726981


Query= Query_185892

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAGGG	AGTAGTGGTTATT	TTAGCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAGGGAGTAGTGGTTATTTTAGCCTC	ARRGSSGYFSL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  K  G  S  D  F  S  F  A  R  N
                    Query_1668   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGATTTCAGTTTTGCCAGGAA  90
V  94.8% (275/290)  IGHV5-51*01  6    ..........................................G............................GA.A...C...A....CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  H  D  S  D  T  R  Y  S  P
                    Query_1668   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTAGAGTGGATGGGGAACATCTATCCTCATGACTCTGATACCAGATACAGCCC  180
V  94.8% (275/290)  IGHV5-51*01  96   .......................................G.............T..........GG........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  T  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1668   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (275/290)  IGHV5-51*01  186  ...................................A.................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        M  Y  Y  C  A  R  R  G  S  S  G  Y  F  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1668   271  CATGTATTATTGTGCGAGACGAGGGAGTAGTGGTTATTTTAGCCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  94.8% (275/290)  IGHV5-51*01  276  .........C..........------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (13/13)   IGHD3-22*01  14   -------------------------.............------------------------------------------  26
J  100.0% (35/35)   IGHJ4*02     14   ---------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_185893

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           315     5e-88
IGHD5-12*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TAAAACGAGCA	GGATATAGTGACTAC	AACGCGCAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAAACGAGCAGGATATAGTGACTACAACGCGCAGGACTAC	VKRAGYSDYNAQDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  A  L  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_1669   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGTTATGCTTTGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGG  90
V  91.4% (222/243)  IGHV3-30*04  47   ........................................C..T..C......A.................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  A  V  I  S  Y  D  G  V  T  K  H  Y  S  D  S  V  T  G  R  F  T  I  S  R  D  N  S  
                    Query_1669   91   CGTGGGTGGCAGTTATATCATATGATGGAGTTACTAAACACTATTCAGACTCCGTGACGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  91.4% (222/243)  IGHV3-30*04  137  A............................AG..A....T....CG............A................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  F  L  E  M  N  S  L  R  S  E  D  T  G  V  Y  Y  C  V  K  R  A  G  Y  S  D  Y  
                    Query_1669   181  AGAACACGCTGTTTCTGGAAATGAACAGCCTGAGAAGTGAAGACACGGGTGTCTATTATTGTGTAAAACGAGCAGGATATAGTGACTACA  270
V  91.4% (222/243)  IGHV3-30*04  227  ............A....C.................GC...G.......C...G.....C....---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  93.3% (14/15)    IGHD5-12*01  3    --------------------------------------------------------------------------..........G....-  17

                                      ------------->                                  
                                      N  A  Q  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_1669   271  ACGCGCAGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  318
J  97.5% (39/40)    IGHJ4*02     9    --------....................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_185894

Length=313
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           329     3e-92
IGHD7-27*01                                                                                           12.2    29   
IGHJ1*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD7-27*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CC	CTGGGG	N/A	GCACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCTGGGGGCAC	ARPWGH	237	254	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	21	23	3	3	0	0	100
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	112	2	0	98.2
CDR3-IMGT (germline)	237	242	6	6	0	0	100
Total	N/A	N/A	222	216	6	0	97.3


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  A  S  Y  I  S  T  S 
                    Query_1670   21   TCTGGATTCACCTTCAGTGACTATTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGCTTCATACATTAGTACTAGT  110
V  97.3% (216/222)  IGHV3-11*01  73   .......................C..............................................T..............G....  162
                                       S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  S  S  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  S  T  K  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 
                    Query_1670   111  GGTAGTACCAAACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAAATGAAC  200
V  97.3% (216/222)  IGHV3-11*01  163  ..........T.T.............................................................................  252
                                       G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><----CDR3-IMGT--->                                  
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  W  G  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1670   201  AGCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGACCCTGGGGGCACTGGGGCCAGGGCACCCTGGTCACTGTCTCCTCAG  288
V  97.3% (216/222)  IGHV3-11*01  253  ................................C.........----------------------------------------------  294
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                               
D  100.0% (6/6)     IGHD7-27*01  5    --------------------------------------------......--------------------------------------  10
J  97.4% (37/38)    IGHJ1*01     15   --------------------------------------------------...........................C..........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30199026


Query= Query_185895

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           327     9e-92
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAG	GTCGAGGGAG	TGACTACGGT	AGACT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGGTCGAGGGAGTGACTACGGTAGACTCTACTTTGACTAC	AKGRGSDYGRLYFDY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	101	51	44	4	3	86.3
CDR2-IMGT	102	125	24	19	5	0	79.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	249	231	15	3	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  I  S  W  V  R  R  A  P  G  K  G  L  
                    Query_1671   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATGCCATCAGCTGGGTCCGCCGGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-23*01  47   ...........................................C.G.........G.............A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S     M  I  G  G  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1671   91   AATGGATCTCA---ATGATTGGTGGTGGTGGAACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  177
V  92.8% (231/249)  IGHV3-23*01  137  .G...G.....GCT..T.G....A.......T.G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  G  R  G  S  D  Y  G  
                    Query_1671   178  AGAACACCCTGTATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCCAAAGGTCGAGGGAGTGACTACGGTA  267
V  92.8% (231/249)  IGHV3-23*01  227  .......G...............A..........................G.............G....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD4-17*01  1    -------------------------------------------------------------------------------..........-  10

                                      ---------------->                                  
                                      R  L  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1671   268  GACTCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (47/47)   IGHJ4*02     2    ----...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_185896

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD6-13*01                                                                                           14.1    9.8   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGCG	GCAACACCTGGTA	TCGAGATTCTCAGGCCGGCAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGCGGCAACACCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGAC	ARHSGNTWYRDSQAGIYFDD	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  G  G  Y
                    Query_1672   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCCCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCGGCTA  90
V  94.8% (276/291)  IGHV5-51*01  6    .............................................T....................................AC.A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_1672   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAACCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ......................................................................................G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  R  S  L  G  T  A  Y  L  Q  W  P  S  L  K  A  S  D  T  A
                    Query_1672   181  GTCCTTTCAAGGACAGGTCACCATCTCAGTCGACAGGTCCCTCGGAACCGCCTACCTGCAGTGGCCCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  ......C.....C................C.....A....A..A.C..................AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  Y  C  A  R  H  S  G  N  T  W  Y  R  D  S  Q  A  G  I  Y  F  D  D  W  G  Q  G  T  L
                    Query_1672   271  CATGTACTACTGTGCGAGACACAGCGGCAACACCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGACTGGGGCCAGGGAACCCT  360
V  94.8% (276/291)  IGHV5-51*01  276  ......T..............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  84.6% (11/13)    IGHD6-13*01  8    --------------------------...G..G......---------------------------------------------------  20
J  95.7% (45/47)    IGHJ4*02     2    ------------------------------------------------------------......T...T...................  31

                                                       
                                        V  T  V  S  S  
                    Query_1672   361  GGTCACCGTCTCCTCAG  377
J  95.7% (45/47)    IGHJ4*02     32   .................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_185897

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD3-16*02                                                                                           12.2    32   
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGT	TCGTTA	CCCAATCTTGGCTTCTGCTT	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTTCGTTACCCAATCTTGGCTTCTGCTTCGGTATGGACGTC	ARDRSLPNLGFCFGMDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  M  G  L  E 
                    Query_1673   1    ACCCTGTCCCTCACCTGCACTGTCTATGGTGACTCCATCAGCAGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGATGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   .........................C.....G.........T...........................C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  Y  N  G  T  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_1673   91   TGGATTGGGCATATCTATTACAATGGGACCACCAGTTACAATCCTTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAT  180
V  92.7% (227/245)  IGHV4-59*01  139  .........T............G.....G.....AC.....C..C...........................G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  S  L  P  N  L  G  F 
                    Query_1673   181  CAGTTCTCCCTGAAGCTGAATTCCGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATCGTTCGTTACCCAATCTTGGCTTC  270
V  92.7% (227/245)  IGHV4-59*01  229  ...................GC..T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*02  28   ---------------------------------------------------------------------......---------------  33

                                      ----------------->                                 
                                       C  F  G  M  D  V  G  G  Q  G  A  T  F  T  V  S  S 
                    Query_1673   271  TGCTTCGGTATGGACGTCGGGGGCCAAGGGGCCACCTTCACCGTCTCCTCA  321
J  91.3% (42/46)    IGHJ6*02     17   -----.............T...........A....GG..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_185898

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           388     4e-110
IGHD6-13*01                                                                                           18.0    0.56  
IGHJ5*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGTGG	GCAGCAGCT	ACA	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGTGGGCAGCAGCTACACGACCAC	AKDRGQQLHDH	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	249	1	0	99.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1674   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.6% (249/250)  IGHV3-23*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1674   91   AGTGGGTCTCAGGTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  99.6% (249/250)  IGHV3-23*01  137  ............C.............................................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  R  G  Q  Q  L  H  
                    Query_1674   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCGTGGGCAGCAGCTACACG  270
V  99.6% (249/250)  IGHV3-23*01  227  ......................................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD6-13*01  8    ----------------------------------------------------------------------------.........-----  16
J  97.6% (40/41)    IGHJ5*02     11   ----------------------------------------------------------------------------------------..  12

                                      ---->                                  
                                      D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1674   271  ACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.6% (40/41)    IGHJ5*02     13   ...C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_145259

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     3e-93
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGGGTCCT	TATAGTGGGAGC	CCGCAAGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACTTC	AKPGPYSGSPQGYFDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1675   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTTCGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (230/248)  IGHV3-23*01  47   .............................................G..AT........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  T  E  T  G  R  N  S  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  
                    Query_1675   91   AGTGGGTCTCAACTATTACTGAGACTGGTCGTAATTCATACTACGCAGACTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCA  180
V  92.7% (230/248)  IGHV3-23*01  137  ...........G......G..GT.G....G...GCA............................G....C...............T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  G  P  Y  S  G  S  
                    Query_1675   181  AGAACACACTGTATCTGCAAATGAACACCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAACCGGGTCCTTATAGTGGGAGCC  270
V  92.7% (230/248)  IGHV3-23*01  227  .......G...................G........................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD1-26*01  3    -----------------------------------------------------------------------------............-  14

                                      T------------------>                                  
                                      P  Q  G  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1675   271  CGCAAGGGTACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.8% (45/46)    IGHJ4*02     3    --------..........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_287025

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         394     7e-112
IGHD4-17*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCACCCCTT	CGGTGAC	CACGTGGTCCCCC	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCACCCCTTCGGTGACCACGTGGTCCCCCACTATGGTATGGACGTC	ASHPFGDHVVPHYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	270	18	0	93.8


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  N  P  G  E  S  L  R  I  S  C  E  G  S  G  Y  N  F  A  N  Y
                    Query_1676     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAACCCCGGGGAGTCTCTGAGGATCTCCTGTGAGGGTTCTGGATACAACTTTGCCAATTA  90
V  93.8% (270/288)  IGHV5-10-1*01  6    .................................G...........................A...............G....A...GC..  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  D  Y  S  P
                    Query_1676     91   CTGGATCAGCTGGGTGCGGCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGCGGATTGATCCTAGTGACTCTTATACCGACTACAGCCC  180
V  93.8% (270/288)  IGHV5-10-1*01  96   ..................C....T............................A..........................A..........  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  S  I  S  A  D  R  F  I  S  T  A  Y  L  R  W  S  S  L  K  A  S  V  I  A
                    Query_1676     181  GTCCTTCCAAGGCCACGTCTCCATCTCAGCTGACAGGTTCATCAGCACTGCCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGTCATCGC  270
V  93.8% (270/288)  IGHV5-10-1*01  186  ...................A...............A..C....................A.......................A..C...  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------------CDR3-IMGT-------------------->                          
                                          I  Y  Y  C  A  S  H  P  F  G  D  H  V  V  P  H  Y  G  M  D  V  W  G  Q  G  A  T  V  T  V
                    Query_1676     271  CATCTATTATTGTGCGAGCCACCCCTTCGGTGACCACGTGGTCCCCCACTATGGTATGGACGTCTGGGGCCAAGGGGCCACGGTCACCGT  360
V  93.8% (270/288)  IGHV5-10-1*01  276  ...G.....C........------------------------------------------------------------------------  293
                                          M  Y  Y  C  A                                                                           
D  100.0% (7/7)     IGHD4-17*01    7    ---------------------------.......--------------------------------------------------------  13
J  96.0% (48/50)    IGHJ6*02       13   -----------------------------------------------....C........................A.............  55

                                               
                                          S  S 
                    Query_1676     361  CTCCTCA  367
J  96.0% (48/50)    IGHJ6*02       56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_30779

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         360     1e-101
IGHJ6*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	N/A	GAGGGG	ACGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAGGGGACGTTATGGACGTC	ARGGDVMDV	244	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_1677     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  H  S  G  L  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  R  S 
                    Query_1677     91   CTGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACAGGTCC  180
V  96.0% (240/250)  IGHV4-30-2*01  139  ..............G......T...........AG..C.T...A......................G.......................  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                         K  N  Q  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  D  V  M  D  V 
                    Query_1677     181  AAGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAGGGGACGTTATGGACGTC  270
V  96.0% (240/250)  IGHV4-30-2*01  229  ...........C.......A..................................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  97.9% (46/47)    IGHJ6*02       16   ----------------------------------------------------------------------------...G..........  29

                                                                         
                                         W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1677     271  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  303
J  97.9% (46/47)    IGHJ6*02       30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_247478

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           308     4e-86
IGHD4-17*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCG	TACGGTGGCTAC	ATGAGAC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCGTACGGTGGCTACATGAGACACTTTGACTAC	ARVPYGGYMRHFDY	230	271	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	48	3	0	94.1
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	110	4	0	96.5
CDR3-IMGT (germline)	230	236	7	7	0	0	100
Total	N/A	N/A	223	210	13	0	94.2


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  L  T  F  N  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  Y  I  S  Y  I  S  S  S 
                    Query_1678   14   TCTGGACTCACCTTCAATAACTATGAGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTATATTTCATACATTAGTAGTAGT  103
V  94.2% (210/223)  IGHV3-48*03  73   ......T.........G..GT.....A........................................GGG....................  162
                                       S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  S  S  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  R  T  I  D  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  E  N  S  L  Y  L  Q  M  N 
                    Query_1678   104  GGTAGAACCATAGACTACGCAGACTCTGTGAGGGGCCGCTTCACCATCTCCAGAGACAACGCCGAGAACTCACTGTATCTGCAAATGAAC  193
V  94.2% (210/223)  IGHV3-48*03  163  .....T......T..................A......A........................A..........................  252
                                       G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><----------------CDR3-IMGT--------------->            
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  Y  G  G  Y  M  R  H  F  D  Y  W  G  Q  G 
                    Query_1678   194  AGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGTCCCGTACGGTGGCTACATGAGACACTTTGACTACTGGGGCCAGGGA  283
V  94.2% (210/223)  IGHV3-48*03  253  ...........................................-----------------------------------------------  295
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  91.7% (11/12)    IGHD4-17*01  5    ------------------------------------------------.......A....------------------------------  16
J  97.8% (44/45)    IGHJ4*02     4    -------------------------------------------------------------------.......................  26

                                                            
                                       I  L  V  T  V  S  S  
                    Query_1678   284  ATCCTGGTCACCGTCTCCTCAG  305
J  97.8% (44/45)    IGHJ4*02     27   .C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_247475

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           319     2e-89
IGHD6-25*01                                                                                           10.3    115  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GCCGGGATT	CAGCG	AAATCAGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGCCGGGATTCAGCGAAATCAGGCTAC	ATGRDSAKSGY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	225	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  Y  H  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1679   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACTGTCAGCAGCTACCACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTG  90
V  91.5% (225/246)  IGHV3-53*01  47   .....................................C.....T...A..T......G..............................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  T  I  Y  I  D  A  T  S  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  K  
                    Query_1679   91   AGTGGGTCTCAACTATCTATATCGATGCTACCTCATACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACTATTCCAAGA  180
V  91.5% (225/246)  IGHV3-53*01  137  ...........GT...T....G..G..G..G.A..........A....................................A.........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      N  T  L  H  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  T  G  R  D  S  A  K  S  G  
                    Query_1679   181  ACACACTGCATCTTCAGATGAACACCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGACAGGCCGGGATTCAGCGAAATCAGGCT  270
V  91.5% (225/246)  IGHV3-53*01  227  ....G...T.......A.......G......................................G..------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (5/5)     IGHD6-25*01  9    ---------------------------------------------------------------------------.....----------  13
J  100.0% (38/38)   IGHJ4*02     11   ----------------------------------------------------------------------------------------..  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1679   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (38/38)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_247477

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            339     1e-95
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	241	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  T  T  N  Y  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_1680   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCACTACTAATTATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.9% (232/247)  IGHV4-4*01   49   ..................G............G........GC.G..G.A.C.......................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  Y  H  S  G  S  T  N  Y  S  P  S  L  K  S  R  V  T  I  S  I  D  K  S  K 
                    Query_1680   91   GAGTGGATTGGGGAAGTCTATCATAGTGGGAGCACCAACTACAGCCCGTCCCTCAAGAGTCGAGTCACCATATCAATAGACAAGTCCAAG  180
V  93.9% (232/247)  IGHV4-4*01   139  ...............A...........................A...............................G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->   
                                       N  Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W 
                    Query_1680   181  AACCAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGG  270
V  93.9% (232/247)  IGHV4-4*01   229  ......T...............G............C...................G...........-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (7/7)     IGHD5-18*01  10   -------------------------------------------------------------------.......----------------  16
J  97.6% (41/42)    IGHJ4*02     7    -------------------------------------------------------------------------------.....T.....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_1680   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (41/42)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_247476

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_1681   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1681   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_1681   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1681   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_247471

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD6-6*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTC	ATTREQLVPIFDF	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	269	18	0	93.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  L  S  S  Y
                    Query_1682   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATTTCCTGTAAGGGTTCTGGATACAGATTAAGCAGTTA  90
V  93.7% (269/287)  IGHV5-51*01  6    ......................................................C.......................C..T.C...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  E  T  K  Y  S  P
                    Query_1682   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCGTCTATCCTGGTGACTCTGAGACCAAATACAGCCC  180
V  93.7% (269/287)  IGHV5-51*01  96   C.......G..........................................G...A...................T....G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  A  S  G  T  A  F  L  Q  W  D  S  L  K  A  S  D  T  A
                    Query_1682   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGGCCAGCGGCACCGCCTTCCTGCAGTGGGACAGCCTGAAGGCCTCGGACACCGC  270
V  93.7% (269/287)  IGHV5-51*01  186  .......C.............................T...T.A.........A..........AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_1682   271  CATGTATTACTGTGCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  356
V  93.7% (269/287)  IGHV5-51*01  276  .................---------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------.......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_247473

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCATGTCCCC	ATTACT	TCCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCATGTCCCCATTACTTCCACTGACTTC	ARAHVPITSTDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  A  I  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1683   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCGCCATCAGTGGTTATTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.8% (224/244)  IGHV4-59*01  49   ...................C.............T........A....C.......G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  N  G  N  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  K 
                    Query_1683   91   TGGATTGGCTATATCTATTACAATGGAAACACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCGAAGAAA  180
V  91.8% (224/244)  IGHV4-59*01  139  ........G.............G...G.G....A..................................A...G..........C.....C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  K  M  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  V  P  I  T  S  T  D 
                    Query_1683   181  CACTTCTCCCTGAAGATGACCTCCATGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCATGTCCCCATTACTTCCACTGAC  270
V  91.8% (224/244)  IGHV4-59*01  229  ..G............C...G...TG......................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-10*01  3    ---------------------------------------------------------------------------......---------  8
J  92.5% (37/40)    IGHJ4*02     8    --------------------------------------------------------------------------------------....  11

                                      -->                                 
                                       F  W  G  L  G  T  L  V  T  V  S  S 
                    Query_1683   271  TTCTGGGGCCTGGGAACCCTGGTCACCGTCTCGTCA  306
J  92.5% (37/40)    IGHJ4*02     12   .A........A.....................C...  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_247472

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           286     1e-79
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	ACGAA	ACGTTTGG	AAGGGGGGCGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAACGAAACGTTTGGAAGGGGGGCGCGTTTGATATC	ARQRNVWKGGAFDI	250	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	63	36	25	5	6	69.4
FR2-IMGT	64	114	51	47	4	0	92.2
CDR2-IMGT	115	135	21	16	5	0	76.2
FR3-IMGT	136	249	114	99	15	0	86.8
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	222	29	6	86.4


Alignments

                                      <--------FR1-IMGT---------><-------------CDR1-IMGT------------><--------------------FR2-IM
                                       T  L  S  L  T  C  T  V  S  G  A  S  M  S  I  D  S  S  S  Y  C  W  A  W  I  R  Q  P  P  G 
                    Query_1684   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGCCTCCATGAGTATCGATAGTAGTAGTTACTGCTGGGCCTGGATCCGCCAGCCCCCAGGG  90
V  86.4% (222/257)  IGHV4-39*01  49   .............................T.G......C..C.------............A.....G......................  132
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S        S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  G  L  E  W  V  G  N  I  Y  H  T  G  V  T  Y  S  N  P  S  L  S  S  R  V  S  T  Y  I  D 
                    Query_1684   91   AAGGGGCTGGAGTGGGTTGGCAATATCTATCACACTGGGGTCACCTACTCCAATCCGTCCCTCAGCAGTCGAGTCAGCACATACATAGAT  180
V  86.4% (222/257)  IGHV4-39*01  133  ...............A....G.G.......T.T.G....AG........A...C..........AG..........C..T..C.G....C  222
                                       K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><----------------CDR3
                                       M  S  M  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  R  N  V  W 
                    Query_1684   181  ATGTCCATGAACCAGTTTTCCCTGAGGCTGACCTCCGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACAACGAAACGTTTGG  270
V  86.4% (222/257)  IGHV4-39*01  223  .C.....A.........C.......A.....G...T.........................................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  100.0% (8/8)     IGHD3-16*01  12   ----------------------------------------------------------------------------------........  19

                                      -IMGT--------------->                                  
                                       K  G  G  A  F  D  I  W  S  Q  G  T  L  V  T  V  S  S  
                    Query_1684   271  AAGGGGGGCGCGTTTGATATCTGGAGCCAAGGGACATTGGTCACCGTCTCTTCAG  325
J  95.3% (41/43)    IGHJ3*02     8    ------------............G...........A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_183070

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     1e-109
IGHD6-25*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTC	ARQSSAGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	269	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  R  S  S  G  Y  D  F  L  D  Y
                    Query_1685   1    GCAGCTGGTGCAGTCTGGAGCAGAGCTAAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGAGTTCTGGGTACGACTTTCTCGACTA  90
V  92.4% (269/291)  IGHV5-51*01  6    .........................G.G..A.....C.........................A.G.......A...AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_1685   91   CTGGATCGTCTGGGTGCGCCAAATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGTCC  180
V  92.4% (269/291)  IGHV5-51*01  96   ........G............G..........................................................G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  A
                    Query_1685   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGCGCAGTCTGAAGGCCTCGGACACCGC  270
V  92.4% (269/291)  IGHV5-51*01  186  .............................C...............C..................A....C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_1685   271  CAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  360
V  92.4% (269/291)  IGHV5-51*01  276  ..T..................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  100.0% (48/48)   IGHJ6*02     15   -------------------------------------------...............................................  61

                                       
                                       
                    Query_1685   361  A  361
J  100.0% (48/48)   IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_183071

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           329     3e-92
IGHD2-21*01                                                                                           10.3    122  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCG	GGTGA	AGACAAGCACTATCATTAT	GGTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGGGTGAAGACAAGCACTATCATTATGGTTTGGACGTC	ARDPGEDKHYHYGLDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  N  F  S  D  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1686   1    GGTCCCTGAGACTCTCCTGTGTAGCGTCTGGATTCAACTTCAGTGACTATGGCATCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-33*01  47   .....................C..............C.......AG.........G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  Y  G  S  I  Y  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_1686   91   AGTGGGTGGCAGTTATATGGTATTATGGAAGTATTTACAACTATGCAGATTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-33*01  137  .......................G.........A.A.AT..........C.....................A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  V  Y  L  R  M  Y  S  L  R  G  D  D  T  A  V  Y  Y  C  A  R  D  P  G  E  D  K  H  
                    Query_1686   181  AGAACACGGTTTATCTGCGAATGTACAGCCTCAGAGGCGACGACACGGCTGTCTATTACTGTGCGAGAGATCCGGGTGAAGACAAGCACT  270
V  92.0% (230/250)  IGHV3-33*01  227  ........C.G.......A....A.......G....C...G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-21*01  14   --------------------------------------------------------------------------.....-----------  18

                                      T------------------>                                 
                                      Y  H  Y  G  L  D  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_1686   271  ATCATTATGGTTTGGACGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCCTCA  323
J  95.6% (43/45)    IGHJ6*02     18   --------...A.......................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_183072

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           396     2e-112
IGHD3-9*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACACCATACGCCGGGT	TTACGATCTTTTGACTGG	N/A	TACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACACCATACGCCGGGTTTACGATCTTTTGACTGGTACCTTGACTCC	ARGHHTPGLRSFDWYLDS	289	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	104	10	0	91.2
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	274	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S 
                    Query_1687   1    CAGGTGCAGCTGGTGCAATCTGGAGGTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACGTTTAGC  90
V  92.9% (274/295)  IGHV1-18*01  1    .....T...........G.......C...G.....................................................C....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  K  N  G  N  T  N  Y 
                    Query_1687   91   AGATATGGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTAAAAATGGTAACACAAATTAC  180
V  92.9% (274/295)  IGHV1-18*01  91   ..C...........C....................................................C.T.C..............C..T  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  R  V  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  F  D  D 
                    Query_1687   181  GCACAGAGGGTCCAGGGAAGAGTCACCATGACGACAGACACATCCACGAGTACAGCCTACATGGAGCTGCGGAGCCTGAGATTTGACGAC  270
V  92.9% (274/295)  IGHV1-18*01  181  .......A.C.......C..............C.................C..................A............C.......  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  F  C  A  R  G  H  H  T  P  G  L  R  S  F  D  W  Y  L  D  S  W  G  Q  G  T  L 
                    Query_1687   271  ACGGCCGTGTATTTCTGTGCGAGAGGACACCATACGCCGGGTTTACGATCTTTTGACTGGTACCTTGACTCCTGGGGCCAGGGAACCCTG  360
V  92.9% (274/295)  IGHV1-18*01  271  .............A...........-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.4% (17/18)    IGHD3-9*01   4    ------------------------------------------.......A..........------------------------------  21
J  95.7% (44/46)    IGHJ4*02     3    ------------------------------------------------------------...T......A...................  32

                                                      
                                       V  T  V  S  S  
                    Query_1687   361  GTCACCGTCTCCTCAG  376
J  95.7% (44/46)    IGHJ4*02     33   ................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_183073

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           346     2e-97
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	TTTGGG	TTTGCTTGGGACTAAATTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTTTGGGTTTGCTTGGGACTAAATTCGAC	ASLGLLGTKFD	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  L  S  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1688   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGGTTCACCCTCAGTAATTATGAGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.7% (234/247)  IGHV3-48*03  47   ........................C......A......T......G......A.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  G  T  I  Y  Y  A  H  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1688   91   AGTGGGTCTCATATATTAGTAGTAGTGGTGGTACCATTTATTACGCACACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.7% (234/247)  IGHV3-48*03  137  .......T.....C...............A.......A..C......G..........................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  L  G  L  L  G  T  K  
                    Query_1688   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTGTTTATTACTGTGCGAGTTTGGGTTTGCTTGGGACTAAAT  270
V  94.7% (234/247)  IGHV3-48*03  227  ....................................C...G..........................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-16*01  15   -------------------------------------------------------------------......-----------------  20

                                      ---->                                  
                                      F  D  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_1688   271  TCGACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  309
J  97.2% (35/36)    IGHJ4*02     13   ---..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_183074

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           310     1e-86
IGHD3-9*01                                                                                            14.1    8.3  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGTGCTCCCGTATTGCAGTCTGACT	ACTTGTTATT	N/A	TGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGTGCTCCCGTATTGCAGTCTGACTACTTGTTATTTGGAAGTC	ASVLPYCSLTTCYLEV	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	18	21	4	4	0	0	100
CDR1-IMGT	22	45	24	23	1	0	95.8
FR2-IMGT	46	96	51	51	0	0	100
CDR2-IMGT	97	120	24	21	3	0	87.5
FR3-IMGT	121	234	114	106	8	0	93
CDR3-IMGT (germline)	235	239	5	5	0	0	100
Total	N/A	N/A	222	210	12	0	94.6


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  I  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_1689   18   GTCTGGATTCATCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  107
V  94.6% (210/222)  IGHV3-33*01  72   ...........C..............................................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  T  K  R  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  N  T  L  Y  L  E  M  N
                    Query_1689   108  TGGAACTAAAAGATATTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGAACACGCTGTATCTAGAAATGAA  197
V  94.6% (210/222)  IGHV3-33*01  162  .....G...T.A...C....C............................................A...............GC.......  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-------------------CDR3-IMGT------------------>     
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  V  L  P  Y  C  S  L  T  T  C  Y  L  E  V  W  G
                    Query_1689   198  TAGCCTGAGAGCCGAGGACACGGCTGTCTACTACTGTGCGAGCGTGCTCCCGTATTGCAGTCTGACTACTTGTTATTTGGAAGTCTGGGG  287
V  94.6% (210/222)  IGHV3-33*01  252  C..........................G..T...........------------------------------------------------  293
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                   
D  90.0% (9/10)     IGHD3-9*01   17   -------------------------------------------------------------------...G......-------------  26
J  97.6% (40/41)    IGHJ6*02     22   -----------------------------------------------------------------------------....C........  34

                                                                  
                                        Q  G  T  T  V  T  V  S  S 
                    Query_1689   288  CCAAGGGACCACGGTCACCGTCTCCTCA  315
J  97.6% (40/41)    IGHJ6*02     35   ............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_183075

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-19*01                                                                                           31.5    6e-05 
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGGGATCCTC	TAGCAGTGGCTGGTAC	CT	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGGGATCCTCTAGCAGTGGCTGGTACCTCAACTGGTTCGACCCC	ARGSSSSGWYLNWFDP	281	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	49	21	0	70
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	166	21	19	2	0	90.5
FR3-IMGT	167	280	114	113	1	0	99.1
CDR3-IMGT (germline)	281	283	3	3	0	0	100
Total	N/A	N/A	283	256	27	0	90.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  T  V  S  G  D  S  I  S  S  Y
                    Query_1690   1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCAGGGGGGTCCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCAGTAGTTA  90
V  90.5% (256/283)  IGHV4-59*01  6    .......CA.G....G..CCC...AC..G.GA....TTC..A.A.....TCC...A..................G...............  95
                                        Q  L  Q  E  S  G  P  G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  F  I  Y  Y  T  G  S  A  N  Y  N  P  S
                    Query_1690   91   CTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAGTGGATTGGGTTTATCTATTACACTGGGAGCGCCAACTACAACCCCTC  180
V  90.5% (256/283)  IGHV4-59*01  96   ...........................A.........................A...........G.......A................  185
                                        Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V
                    Query_1690   181  CCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGT  270
V  90.5% (256/283)  IGHV4-59*01  186  ...........................A..............................................................  275
                                        L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V

                                      ---------><-------------------CDR3-IMGT------------------>                                
                                        Y  Y  C  A  R  G  S  S  S  S  G  W  Y  L  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1690   271  GTATTACTGTGCGCGGGGATCCTCTAGCAGTGGCTGGTACCTCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  90.5% (256/283)  IGHV4-59*01  276  .............-----------------------------------------------------------------------------  288
                                        Y  Y  C  A                                                                              
D  100.0% (16/16)   IGHD6-19*01  6    ------------------------................--------------------------------------------------  21
J  100.0% (50/50)   IGHJ5*02     2    ------------------------------------------................................................  49

                                        
                                        
                    Query_1690   361  AG  362
J  100.0% (50/50)   IGHJ5*02     50   ..  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_183076

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD1-26*01                                                                                           10.3    112  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCGGAAGAA	GGGAG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGGAAGAAGGGAGATTGACTAC	AGGRREIDY	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	225	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  N  H  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1691   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTAATCACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.8% (225/240)  IGHV4-59*01  49   ........................................G..G.T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  D  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1691   91   TGGATTGGGTATCTTTATTACGATGGTGACACCAAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  93.8% (225/240)  IGHV4-59*01  139  ............A.C......AG...GAG......C......................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  G  R  R  E  I  D  Y  W  G 
                    Query_1691   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGGGCGGAAGAAGGGAGATTGACTACTGGGGC  270
V  93.8% (225/240)  IGHV4-59*01  229  ...............C...............................G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  9    ----------------------------------------------------------------------.....---------------  13
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------..............  20

                                                                  
                                       R  G  T  L  V  T  V  S  S  
                    Query_1691   271  CGGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   .A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_183077

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           347     7e-98
IGHD4-4*01                                                                                            19.9    0.16 
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD4-4*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGCCTT	TGACTACTATAACTAC	TACTAT	TTCGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGCCTTTGACTACTATAACTACTACTATTTCGTCCCC	ARDAFDYYNYYYFVP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  L  T  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1692   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACCTCACTAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-30*04  47   ....................................C.T...G...C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  S  Y  D  G  T  D  K  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  K  S  
                    Query_1692   91   AGTGGGTGGCAATTATTTCATATGATGGAACTGATAAATACTACGCAGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAGACAAATCCA  180
V  94.4% (236/250)  IGHV3-30*04  137  ...........G....A.............G.A....................................C...............T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  A  F  D  Y  Y  N  
                    Query_1692   181  AGAACACGCTGTATCTACAGATGAACAGCCTGAGAGTTGAGGACACGGCTGTATATTACTGTGCGAGAGACGCCTTTGACTACTATAACT  270
V  94.4% (236/250)  IGHV3-30*04  227  ................G..A................C...............G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD4-4*01   1    ----------------------------------------------------------------------------.......AG.....  14

                                      ---------------->                                  
                                      Y  Y  Y  F  V  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1692   271  ACTACTATTTCGTCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  321
D  87.5% (14/16)    IGHD4-4*01   15   ..-------------------------------------------------  16
J  95.3% (41/43)    IGHJ5*02     9    --------....A.................................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_183078

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.043
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACCCCCTTTTGACTAC	ARDPAVVVQWVAGTGPPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1693   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1693   91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_1693   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  P  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1693   271  GGGTGGCTGGTACAGGACCCCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_183079

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           327     9e-92
IGHD1-1*01                                                                                            12.2    34   
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCAGGAT	GTACAA	GTGCCAGGTGATCTGCGGATA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAGATCAGGATGTACAAGTGCCAGGTGATCTGCGGATATACTTCTACGGTTTGGACGTC	AADQDVQVPGDLRIYFYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	230	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  A  T  D  L  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_1694   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCGCCACTGATCTTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.6% (230/251)  IGHV4-61*01  49   .......................................AG..G..G.AG........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  L  Y  Y  N  G  V  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  R  D  S  S 
                    Query_1694   91   CTGGAGTGGATTGGATATCTCTATTACAATGGGGTCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAAGAGACTCGTCC  180
V  91.6% (230/251)  IGHV4-61*01  139  ..............G...A.........G....AG...........................................GT....A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  M  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  A  D  Q  D  V  Q  V  P 
                    Query_1694   181  AAGAACCAGTTCTCCCTGAAGATGAACTCTGTGACCGCTGCGGACTCGGCCGTATATTATTGTGCGGCAGATCAGGATGTACAAGTGCCA  270
V  91.6% (230/251)  IGHV4-61*01  229  .....................C...G...................A.......G.....C......AG...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-1*01   2    ------------------------------------------------------------------------------......------  7

                                      CDR3-IMGT-------------------------->                                 
                                       G  D  L  R  I  Y  F  Y  G  L  D  V  W  G  L  G  T  M  V  T  V  S  S 
                    Query_1694   271  GGTGATCTGCGGATATACTTCTACGGTTTGGACGTCTGGGGCCTAGGGACCATGGTCACCGTCTCCTCA  339
J  92.6% (50/54)    IGHJ6*02     9    ---------------....A.......A...............A........C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_238988

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           353     1e-99
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AACCCCGCAAT	GTATTACTATGATGATAGTGG	ATCCAGGCCCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAACCCCGCAATGTATTACTATGATGATAGTGGATCCAGGCCCTACTACTTTGACTAC	AKNPAMYYYDDSGSRPYYFDY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  R  G  L  
                    Query_1695   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  95.6% (237/248)  IGHV3-23*01  47   .............................................G...................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  L  T  G  G  G  G  S  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  H  N  S  
                    Query_1695   91   AGTGGGTCTCAGGTCTTACTGGTGGAGGTGGTAGTACATACTACACAGACTCCGTGAAGGGCCGGTTCACCATCTCGAGACACAATTCCA  180
V  95.6% (237/248)  IGHV3-23*01  137  ............C.A...G....A.T........C.........G...............................C...G.........  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  N  P  A  M  Y  Y  Y  
                    Query_1695   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAAACCCCGCAATGTATTACTATG  270
V  95.6% (237/248)  IGHV3-23*01  227  ....................................................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.5% (19/21)    IGHD3-22*01  1    -------------------------------------------------------------------------------...........  11

                                      DR3-IMGT-------------------------->                                  
                                      D  D  S  G  S  R  P  Y  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_1695   271  ATGATAGTGGATCCAGGCCCTACTACTTTGACTACTGGGGCCAGGGAATTCTGGTCACCGTCTCCTCAG  339
D  90.5% (19/21)    IGHD3-22*01  12   ..AG......-----------------------------------------------------------  21
J  95.8% (46/48)    IGHJ4*02     1    ---------------------...........................CC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_236112

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           353     9e-100
IGHD3-3*01                                                                                            39.1    2e-07 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	T	TTACGATTTTTTGAGTGGTTATT	N/A	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATTTACGATTTTTTGAGTGGTTATTACTTC	AIYDFLSGYYF	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	243	4	4	0	0	100
Total	N/A	N/A	240	233	7	0	97.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_1696   4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  97.1% (233/240)  IGHV4-34*01  50   .....TCC...A..............................................................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_1696   94   GGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTGAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  97.1% (233/240)  IGHV4-34*01  140  .................................................C........................................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  K  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  I  Y  D  F  L  S  G  Y  Y  F  
                    Query_1696   184  AGTTCTCCCTGAAACTGAGCTCTCTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGATTTACGATTTTTTGAGTGGTTATTACTTCT  273
V  97.1% (233/240)  IGHV4-34*01  230  .............G.........G....................................------------------------------  289
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  95.7% (22/23)    IGHD3-3*01   4    -------------------------------------------------------------...........G...........------  26
J  97.4% (38/39)    IGHJ4*02     10   ------------------------------------------------------------------------------------...A..  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1696   274  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.4% (38/39)    IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_113502

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           297     7e-83
IGHD6-19*01                                                                                           12.2    31   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GGCTGG	AGGCAGCGC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCTGGAGGCAGCGCCTATTATTATGGTTTGGACGTC	ARAGGSAYYYGLDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	216	26	0	89.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  R  S  G  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_1697   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGAAGTGGCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  89.3% (216/242)  IGHV4-59*08  49   ..................A......................T...TA......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  Y  N  G  G  S  T  D  Y  N  P  S  L  R  S  R  V  T  I  S  A  D  T  S  K  K 
                    Query_1697   91   TGGATTGGATACTTCTATAATGGGGGGAGCACCGATTACAATCCCTCCCTCAGGAGTCGAGTCACCATCTCAGCAGACACGTCCAAGAAG  180
V  89.3% (216/242)  IGHV4-59*08  139  ........G..TA.....T.CA.T.........A.C.....C..........A...............A....T...............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  L  S  L  T  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  G  S  A  Y  Y  Y  G 
                    Query_1697   181  CAACTCTCCCTGACGGTGACCTCTGTGACCGCCGCAGACACGGCCGTTTACTACTGTGCGAGGGCTGGAGGCAGCGCCTATTATTATGGT  270
V  89.3% (216/242)  IGHV4-59*08  229  ..GT.........A.C...G...........................G..T...........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD6-19*01  13   --------------------------------------------------------------......----------------------  18
J  90.9% (50/55)    IGHJ6*02     8    -----------------------------------------------------------------------------...C..C..C...  20

                                      -------->                                 
                                       L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1697   271  TTGGACGTCTGGGGCCAAGGGACCACGGTCACTGTCTCCTCA  312
J  90.9% (50/55)    IGHJ6*02     21   A...............................C.........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_113504

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*03                                                                                           299     3e-83
IGHD3-22*01                                                                                           23.8    0.012
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TAGTCCGAAAACCGCTGGGA	TATGACTATGAGAGTAGCGGT	GA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTAGTCCGAAAACCGCTGGGATATGACTATGAGAGTAGCGGTGATGACTAC	AKVVRKPLGYDYESSGDDY	261	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	102	54	50	1	3	92.6
CDR2-IMGT	103	146	39	20	4	15	51.3
FR3-IMGT	147	260	114	106	8	0	93
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	233	16	18	87.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><-------------------FR2-IMGT---------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1698   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTTAGTAACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.3% (233/267)  IGHV3-23*03  47   ....................G......................C.G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -----------><-----------------CDR2-IMGT----------------><---------------------------------
                                      E  W  V  S  G  I  T  S  R  G  G  S  S  G  G  G  G  G  T  Y  Y  A  D  S  V  K  G  R  F  T  
                    Query_1698   91   AGTGGGTCTCAGGCATTACTAGTAGGGGTGGTAGTAGTGGAGGGGGTGGCGGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCA  180
V  87.3% (233/267)  IGHV3-23*03  137  ............---...T.TA...C...........---------------.........T............................  208
                                      E  W  V  S     V  I  Y  S  G  G  S  S                 T  Y  Y  A  D  S  V  K  G  R  F  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  R  D  N  S  K  N  T  L  F  L  L  M  K  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  V  
                    Query_1698   181  TCTCCAGAGACAATTCCAAGAACACACTGTTTCTGCTAATGAAGAGCCTGAGAGTCGAGGACACGGCCGTCTATTACTGTGCGAAAGTAG  270
V  87.3% (233/267)  IGHV3-23*03  209  ..........T..............G....A.....A......C..........C...............A................---  295
                                      I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K     

                                      --------------CDR3-IMGT----------------------->                                
                                      V  R  K  P  L  G  Y  D  Y  E  S  S  G  D  D  Y  W  G  Q  G  S  L  V  T  V  S  S
                    Query_1698   271  TCCGAAAACCGCTGGGATATGACTATGAGAGTAGCGGTGATGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTC  349
D  85.7% (18/21)    IGHD3-22*01  2    -----------------...T.......T.....T...-----------------------------------------  22
J  97.4% (38/39)    IGHJ4*02     8    ----------------------------------------...................A...................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_113507

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           422     2e-120
IGHD3-10*01                                                                                           21.8    0.046 
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCTC	TTCGCGGACTTATTATA	TGG	ACTGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCTCTTCGCGGACTTATTATATGGACTGTTTCGCCCCC	ARASSRTYYMDCFAP	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	292	281	11	0	96.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  A  S  G  Y  S  F  P  
                    Query_1699   2    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAGGGCTTCTGGATACAGCTTTCCCA  91
V  96.2% (281/292)  IGHV5-51*01  2    ....G.............................................................A..G................A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  K  Y  
                    Query_1699   92   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAAATACA  181
V  96.2% (281/292)  IGHV5-51*01  92   G....................................................................G..............G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  L  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_1699   182  GCCCGTCCTTCCAAGGCCTGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACC  271
V  96.2% (281/292)  IGHV5-51*01  182  ..................A.............................G........................................A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      P  A  M  Y  F  C  A  R  A  S  S  R  T  Y  Y  M  D  C  F  A  P  W  G  Q  G  T  L  V  T  V  
                    Query_1699   272  CCGCCATGTATTTCTGTGCGAGGGCCTCTTCGCGGACTTATTATATGGACTGTTTCGCCCCCTGGGGCCAGGGAACCCTGGTCACCGTCT  361
V  96.2% (281/292)  IGHV5-51*01  272  ............A.........--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  88.2% (15/17)    IGHD3-10*01  13   ----------------------------....G...G........---------------------------------------------  29
J  95.8% (46/48)    IGHJ5*02     4    ------------------------------------------------....G....A................................  45

                                            
                                      S  S  
                    Query_1699   362  CCTCAG  367
J  95.8% (46/48)    IGHJ5*02     46   ......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_113506

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*07                                                                                           283     1e-78
IGHD3-9*01                                                                                            14.1    8.7  
IGHJ2*01                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*07	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGACCGATAC	TGACTGG	GGTGGTCACACAGGGCTCTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACCGATACTGACTGGGGTGGTCACACAGGGCTCTTCTGGTACTTCGATCTC	AKTDTDWGGHTGLFWYFDL	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	21	9	0	70
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	13	8	0	61.9
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	247	4	4	0	0	100
Total	N/A	N/A	247	214	33	0	86.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  D  G  S  V  T  T  T  D  S  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_1700   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGATGGCTCCGTCACCACGACTGATTCCTACTGGGGCTGGATCCGCCAGCCCCCAGGAAAGGGG  90
V  86.6% (214/247)  IGHV4-39*07  49   ..................A.........G.......A...G..GT.G.AG..A..............................G......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  V  Y  H  R  G  D  A  Y  Y  N  P  S  L  K  S  R  V  T  V  S  M  D  T  S 
                    Query_1700   91   CTGGAGTGGATTGGGAGTGTCTATCATCGCGGGGACGCGTACTACAATCCGTCCCTCAAGAGTCGAGTCACCGTCTCAATGGACACGTCC  180
V  86.6% (214/247)  IGHV4-39*07  139  ..................A.....T..A.T...AG.A.C........C........................A.A...G.A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       S  N  Q  V  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  T  D  T  D  W  G  G 
                    Query_1700   181  AGTAATCAGGTCTCCCTGAGCCTGAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAAGACCGATACTGACTGGGGTGGT  270
V  86.6% (214/247)  IGHV4-39*07  229  .AG..C...T.........AG.....C..............G................A........-----------------------  295
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-9*01   15   -----------------------------------------------------------------------------.......------  21

                                      3-IMGT----------------------->                                  
                                       H  T  G  L  F  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_1700   271  CACACAGGGCTCTTCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  334
J  100.0% (50/50)   IGHJ2*01     4    --------------..................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_113509

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           318     6e-89
IGHD6-6*01                                                                                            19.9    0.15 
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-6*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCC	AGTATAGAAGATCGTC	GGCTGGT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCAGTATAGAAGATCGTCGGCTGGTTGCTTTTGATATC	ARPSIEDRRLVAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  R  G  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  Q 
                    Query_1701   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGGGGTTACTACTGGAGCTGGGTCCGTCAGCCCCCAGGGAAGGGGCTGCAG  90
V  91.8% (223/243)  IGHV4-34*01  49   .........................................T..................A....C.....................G..  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  I  N  R  R  G  S  S  Y  H  S  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_1701   91   TGGCTTGGCGAAATCAACCGTAGAGGAAGTAGCTATCACAGCCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGTCCAAGAAC  180
V  91.8% (223/243)  IGHV4-34*01  139  ...A....G........T.A...T.....C.C.A.CT...A...........................A.....A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  F  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  S  I  E  D  R  R  L  V 
                    Query_1701   181  CAGTTCTCCCTGAAGCTGAGTTTTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGACCCAGTATAGAAGATCGTCGGCTGGTT  270
V  91.8% (223/243)  IGHV4-34*01  229  ....................C.C........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (14/16)    IGHD6-6*01   2    ------------------------------------------------------------------.......C..C.....--------  17
J  100.0% (47/47)   IGHJ3*02     4    -----------------------------------------------------------------------------------------.  4

                                      ----------->                                  
                                       A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1701   271  GCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  316
J  100.0% (47/47)   IGHJ3*02     5    ..............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_113508

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*04                                                                                           296     2e-82
IGHD2-21*01                                                                                           10.3    124  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*04	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATAAAGACCCCGGAGGGCGC	CTATT	TCTCG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATAAAGACCCCGGAGGGCGCCTATTTCTCGTACTACGGTATGGACGTC	ARIKTPEGAYFSYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	218	29	0	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  I  A  S  G  F  T  F  S  D  F  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1702   1    GGTCCCTGAGACTCTCCTGTATAGCCTCTGGATTCACCTTCAGTGATTTTACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGC  90
V  88.3% (218/247)  IGHV3-21*04  47   ....................GC......................AGC.A..G.................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  S  S  G  T  Y  T  Y  Y  A  D  S  L  Q  G  R  F  T  I  A  R  D  N  A  
                    Query_1702   91   AGTGGGTGTCATCCATTAGTAGTAGTGGGACTTACACATACTACGCAGACTCACTTCAGGGCCGATTCACCATCGCCAGAGACAACGCCA  180
V  88.3% (218/247)  IGHV3-21*04  137  .......C..................A.T.G.....T................G.GA.................T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  R  S  L  Y  L  Q  V  N  S  L  R  T  E  D  T  G  I  Y  Y  C  A  R  I  K  T  P  E  G  A  
                    Query_1702   181  AGAGGTCTCTGTATCTCCAAGTGAACAGCCTGAGAACCGAGGACACCGGCATATATTATTGTGCGAGGATAAAGACCCCGGAGGGCGCCT  270
V  88.3% (218/247)  IGHV3-21*04  227  ...AC..A........G...A..............G..........G.C.G.G.....C........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  22   ----------------------------------------------------------------------------------------..  23

                                      IMGT--------------------->                              
                                      Y  F  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  F  T  V  S 
                    Query_1702   271  ATTTCTCGTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGTTCACCGTCTCC  326
D  100.0% (5/5)     IGHD2-21*01  24   ...-----------------------------------------------------  26
J  97.9% (47/48)    IGHJ6*02     12   --------....................................G...........  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_236110

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           319     2e-89
IGHJ2*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	N/A	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TGGCCAAAGGGACGAGGAAA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCCAAAGGGACGAGGAAAACTGGTACATCGATCTC	ARDGQRDEENWYIDL	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  R  D  P  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1703   1    GGTCCCTGAGACTCTCCTGTGTTGCCTCTGGATTCAGCTTCAGAGACCCTGGCATGCACTGGGTCCGCCAGGCTCCCGGCAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-30*03  47   .....................CA.............C......TAG.TA...........................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  D  G  R  D  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  F  
                    Query_1703   91   AATGGGTGGCACTTATATCATATGACGGAAGGGATAAATATTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTTCA  180
V  90.8% (227/250)  IGHV3-30*03  137  .G.........G.............T.....TA.......C....C.........................................C..  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  D  S  L  K  P  E  D  T  A  V  Y  Y  C  A  R  D  G  Q  R  D  E  E  
                    Query_1703   181  AGAACACACTGTATCTACAAATGGACAGCCTGAAACCTGAGGACACGGCTGTCTATTACTGTGCGAGAGATGGCCAAAGGGACGAGGAAA  270
V  90.8% (227/250)  IGHV3-30*03  227  .......G........G......A.........G.G................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ---------------->                                  
                                      N  W  Y  I  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_1703   271  ACTGGTACATCGATCTCTGGGGCCGGGGCACCCTGGTCGCTGTCTCCTCAG  321
J  94.1% (48/51)    IGHJ2*01     3    ........T................T............A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_324919

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	221	24	6	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_1704   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.0% (221/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_1704   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.0% (221/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  S  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_1704   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCTCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.0% (221/251)  IGHV4-34*01  223  ....................GC............C....G...................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_1704   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_332424

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD5-12*01                                                                                           14.1    8.8  
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGAGTCG	GTGGCTA	TT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGAGTCGGTGGCTATTACAACTGGTTCGACCCC	ARRVGGYYNWFDP	261	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	42	9	0	82.4
CDR2-IMGT	126	146	21	16	5	0	76.2
FR3-IMGT	147	260	114	100	14	0	87.7
CDR3-IMGT (germline)	261	266	6	6	0	0	100
Total	N/A	N/A	266	232	34	0	87.2


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  F  R  N  Y  Y  Y  N  W  I  R  
                    Query_1705   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACGTGCACGGTCTCTGGTGGCTCCTTCAGAAATTACTACTACAATTGGATTCGGC  90
V  87.2% (232/266)  IGHV4-59*01  26   ................T....................C.....T...............A....T.G........GG.GC.....C....  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  S  P  G  R  G  L  E  W  I  G  H  I  Y  F  T  G  G  T  K  Y  N  P  S  F  K  S  R  V  S  
                    Query_1705   91   AGTCCCCAGGGAGGGGACTGGAGTGGATTGGACATATTTATTTTACTGGGGGCACCAAGTATAACCCCTCCTTCAAAAGTCGAGTCTCCA  180
V  87.2% (232/266)  IGHV4-59*01  116  ..C.........A..................GT....C....AC.G....A.......C..C.........C....G.........A...  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  A  S  K  N  Q  F  S  L  T  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  
                    Query_1705   181  TCTCAGTGGACGCGTCGAAGAACCAGTTCTCCCTGACTCTAAACTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAAGAG  270
V  87.2% (232/266)  IGHV4-59*01  206  .A.....A...A....C...................AG..G.G...........................G...............----  291
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -----CDR3-IMGT-------------->                                  
                                      V  G  G  Y  Y  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  A  
                    Query_1705   271  TCGGTGGCTATTACAACTGGTTCGACCCCTGGGGCCAGGGAGCGCTGGTCACCGTCTCCGCAG  333
D  100.0% (7/7)     IGHD5-12*01  10   ---.......-----------------------------------------------------  16
J  94.1% (48/51)    IGHJ5*02     1    ------------.............................A.C...............T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_324912

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           277     1e-76
IGHD2-15*01                                                                                           21.8    0.045
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATAGGC	AGTGGTGGTGGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATAGGCAGTGGTGGTGGCTGCTACTTTGACAAC	ARRLGSGVPCTPFRIGSGGGCYFDN	244	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	213	36	0	85.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  P  G  D  S  I  S  S  D  S  F  Y  W  A  W  I  R  Q  S  P  V  K  G 
                    Query_1706   1    ACCCTGTCCCTCACCTGCACTGTTCCCGGTGATTCCATCAGCAGTGACAGTTTCTACTGGGCCTGGATCCGCCAGTCCCCAGTGAAGGGA  90
V  85.5% (213/249)  IGHV4-39*02  49   .......................CT.T....GC............AGT....A........G.............C......G......G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  M  F  N  G  G  R  T  Y  S  N  P  S  L  K  N  R  V  T  I  S  A  D  T  S 
                    Query_1706   91   CTGGAGTGGATAGGGACTATGTTTAATGGTGGACGCACCTATTCCAACCCGTCCCTCAAGAATCGAGTCACCATATCTGCGGACACGTCC  180
V  85.5% (213/249)  IGHV4-39*02  139  ...........T....G...C.A.T..A....GA.......C.A.................G...............C.TA.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       R  N  H  F  S  L  R  L  T  Y  V  T  S  A  D  S  G  V  Y  Y  C  A  R  R  L  G  S  G  V  P 
                    Query_1706   181  AGGAACCACTTCTCCCTGAGGCTGACCTATGTGACCTCCGCAGACAGCGGTGTCTATTACTGTGCGAGACGTCTTGGGTCCGGTGTCCCC  270
V  85.5% (213/249)  IGHV4-39*02  229  .A.................A.....G..C.......G.........CG.C...G...............---------------------  297
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      ------CDR3-IMGT-------------------------------->                                 
                                       C  T  P  F  R  I  G  S  G  G  G  C  Y  F  D  N  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_1706   271  TGTACTCCCTTCCGCATAGGCAGTGGTGGTGGCTGCTACTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  351
D  92.9% (13/14)    IGHD2-15*01  11   ---------------------.........A....----------------------------------------------  24
J  97.8% (45/46)    IGHJ4*02     2    -----------------------------------..........T...................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_85720

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           332     3e-93
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
Total	N/A	N/A	242	227	15	0	93.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1707   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.8% (227/242)  IGHV3-33*03  47   .....................................C..C.....C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  K  K  Y  Y  A  D  S  V  K  G  *  F  T  I  F  R  D  D  S  
                    Query_1707   91   AGTGGGTGGCAGTTATATGGTATGATGGAATTAAGAAATACTATGCAGACTCCGTGAAGGGCTGATTCACCATCTTCAGAGACGACTCCA  180
V  93.8% (227/242)  IGHV3-33*03  137  ..............................G...T...........................C............C.......A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_1707   181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCG  270
V  93.8% (227/242)  IGHV3-33*03  227  .......G....A......A..............................G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  90.9% (10/11)    IGHD6-13*01  7    -------------------------------------------------------------------....G......------------  17
J  97.8% (45/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_1707   271  ACCCCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  309
J  97.8% (45/46)    IGHJ5*02     13   .....................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_324910

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            333     1e-93
IGHD3-3*02                                                                                            12.2    31   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTT	GCATTT	CGATCTCCCACGAGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGCATTTCGATCTCCCACGAGGCATGGACGTC	ARLHFDLPRGMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  T  Y  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_1708  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGGGGCTCCATCACCAGTACTTACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  93.5% (229/245)  IGHV4-4*01  49   ..................G....C.....T..........G.....G.A.........G...........................G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  S  G  S  P  H  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_1708  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCCCCCACTACAGTCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  93.5% (229/245)  IGHV4-4*01  139  .................................A..A......AC.............................................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                      N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  W  C  A  R  L  H  F  D  L  P  R  G 
                    Query_1708  181  AACCAGTTCTCCCTGAAGTTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTGGTGTGCGAGGTTGCATTTCGATCTCCCACGAGGC  270
V  93.5% (229/245)  IGHV4-4*01  229  ..................C....C.............................T..C........-------------------------  293
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  100.0% (6/6)     IGHD3-3*02  7    --------------------------------------------------------------------......----------------  12

                                     -------->                                 
                                      M  D  V  W  G  Q  G  T  T  A  I  V  S  S 
                    Query_1708  271  ATGGACGTCTGGGGCCAAGGGACCACGGCCATCGTCTCCTCA  312
J  95.2% (40/42)    IGHJ6*02    21   ............................T..C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_324911

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           327     9e-92
IGHD1-26*01                                                                                           12.2    32   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTAGACCA	AGTGGG	GCTGCGGGGGAACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTAGACCAAGTGGGGCTGCGGGGGAACAACTTTGACTAC	ARHVDQVGLRGNNFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	230	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  L  G  R  Y  Y  W  G  W  L  R  Q  P  P  G  K  G 
                    Query_1709   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACCCTTGGAAGATACTATTGGGGCTGGCTCCGCCAGCCCCCCGGGAAGGGG  90
V  91.6% (230/251)  IGHV4-39*01  49   ...............................G........G.AG.A.T..T.....C.........A.............A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  H  Y  S  G  S  P  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1709   91   CTGGAGTGGATTGCGAGTATTCATTACAGTGGGAGCCCCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCCGTAGACACGTCC  180
V  91.6% (230/251)  IGHV4-39*01  139  .............G......CT....T.........A.....................................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  H  F  S  L  R  L  R  S  V  T  A  S  D  T  A  V  Y  Y  C  A  R  H  V  D  Q  V  G  L 
                    Query_1709   181  AAGAACCACTTCTCCCTGAGGCTGAGGTCTGTGACCGCCTCAGACACGGCTGTATATTACTGTGCGAGACATGTAGACCAAGTGGGGCTG  270
V  91.6% (230/251)  IGHV4-39*01  229  ........G..........A......C............G.............G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-26*01  6    --------------------------------------------------------------------------------......----  11

                                      GT------------------>                                  
                                       R  G  N  N  F  D  Y  W  G  Q  G  S  L  A  T  V  S  S  
                    Query_1709   271  CGGGGGAACAACTTTGACTACTGGGGCCAGGGAAGTCTGGCCACCGTCTCCTCAG  325
J  93.3% (42/45)    IGHJ4*02     4    ----------........................CC....T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_324916

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           349     2e-98
IGHD4-17*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	TTTCCA	GACTACGGTGAC	AACTTTTTACGAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTTTCCAGACTACGGTGACAACTTTTTACGAT	TFQTTVTTFYD	248	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	28	27	1	0	96.4
CDR1-IMGT	29	52	24	22	2	0	91.7
FR2-IMGT	53	103	51	50	1	0	98
CDR2-IMGT	104	133	30	28	2	0	93.3
FR3-IMGT	134	247	114	107	7	0	93.9
CDR3-IMGT (germline)	248	249	2	2	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  E
                    Query_1710   1    GTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTCAGTAATGCCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGA  90
V  94.8% (236/249)  IGHV3-15*01  48   ......T............................C.........C..........G.................................  137
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E

                                      ------------><----------CDR2-IMGT---------><----------------------------------------------
                                        W  V  G  R  I  K  S  K  N  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D
                    Query_1710   91   GTGGGTTGGCCGTATTAAAAGCAAAAATGATGGTGGAACAACAGACTACGCTGCACCCGTGAAAGGCAGATTTACCATCTCAAGAGATGA  180
V  94.8% (236/249)  IGHV3-15*01  138  ..........................C.........G...................................C.................  227
                                        W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D

                                      ------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT--
                                        S  K  K  T  V  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  F  Q  T  T  V  T  T
                    Query_1710   181  TTCAAAGAAGACGGTGTATCTGCAAATGAATAGCCTGAAAACCGAGGACACAGCCGTGTACTATTGTACTTTCCAGACTACGGTGACAAC  270
V  94.8% (236/249)  IGHV3-15*01  228  ......A..C...C................C.............................T..C.....---------------------  296
                                        S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                     
D  100.0% (12/12)   IGHD4-17*01  2    ---------------------------------------------------------------------------............---  13

                                      --------->                                  
                                        F  Y  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1710   271  TTTTTACGATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  314
J  100.0% (34/34)   IGHJ4*02     15   ----------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_324914

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           335     4e-94
IGHD6-19*01                                                                                           12.2    32   
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-19*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCTTG	GCACTGGCT	CCTCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATCGCTTGGCACTGGCTCCTCGTGCTTTCGATGTC	TRDRLALAPRAFDV	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	235	21	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  G  D  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1711   1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCAATTTTGGTGATTATGCTATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  91.8% (235/256)  IGHV3-49*04  47   ....................................CC...................G.....................G..........  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  L  G  F  I  R  T  T  A  Y  G  A  T  T  E  Y  A  A  S  V  E  D  R  L  T  I  S  R  D  
                    Query_1711   91   AGTGGTTAGGTTTCATAAGAACAACAGCTTATGGTGCGACAACAGAGTATGCCGCGTCTGTGGAGGACAGACTCACCATCTCAAGAGATG  180
V  91.8% (235/256)  IGHV3-49*04  137  .....G..........T....GC.A...........G.........A..C............A.A.G....T..................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  T  R  D  R  L  A  L  
                    Query_1711   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAGAGTGAAGACACAGCCGTGTATTATTGTACTAGAGATCGCTTGGCACTGG  270
V  91.8% (235/256)  IGHV3-49*04  227  ........................................A.CC..G.................C...........--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  88.9% (8/9)      IGHD6-19*01  8    -----------------------------------------------------------------------------------...G...  14

                                      IMGT--------------->                                  
                                      A  P  R  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1711   271  CTCCTCGTGCTTTCGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
D  88.9% (8/9)      IGHD6-19*01  15   ..----------------------------------------------------  16
J  97.9% (46/47)    IGHJ3*01     4    -------......T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_324915

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           350     8e-99
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCATC	ATTACTATGCTAACAGTGATTATT	TCGTAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCATCATTACTATGCTAACAGTGATTATTTCGTAGAC	ARGHHYYANSDYFVD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  V  R  Q  H  P  G  K  G 
                    Query_1712   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*03  49   .............................TGG.......A..........................A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  S  A  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1712   91   CTGGAGTGGATTGGCTGCATCTATTACAGTGGGAGCGCCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCGGTCGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*03  139  ..............G.A...................A........................................A..A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  G  H  H  Y  Y  A  N 
                    Query_1712   181  AAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACTCGGCCGTGTATTACTGTGCGAGAGGGCATCATTACTATGCTAAC  270
V  94.8% (237/250)  IGHV4-31*03  229  .....................C...G...................A........................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  83.3% (20/24)    IGHD3-22*01  3    ----------------------------------------------------------------------------.........A..GT  16

                                      ----------------->                                  
                                       S  D  Y  F  V  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1712   271  AGTGATTATTTCGTAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  83.3% (20/24)    IGHD3-22*01  17   ....G.....------------------------------------------  26
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_201604

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           308     4e-86
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	246	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	102	12	0	89.5
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	223	26	0	89.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_1713   4    CCCTGAGACTCTCCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  89.6% (223/249)  IGHV4-61*08  50   .....TCC...A........G.........G.......AG..G..G.....A......................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S  
                    Query_1713   94   TAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCCA  183
V  89.6% (223/249)  IGHV4-61*08  140  .G..................T..T................C.................G.......TC.........G.A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N  
                    Query_1713   184  GGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAACT  273
V  89.6% (223/249)  IGHV4-61*08  230  A.................A.....GC..........................G.....C..........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  86.4% (19/22)    IGHD2-15*01  7    -------------------------------------------------------------------------.....G..G.....G..  23

                                      -IMGT----------------------->                                  
                                      C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1713   274  GCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  86.4% (19/22)    IGHD2-15*01  24   .....----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    --------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_201606

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD3-16*01                                                                                           10.3    116  
IGHJ6*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGG	GGTAAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGGTAATTACTACTACGCTTTGGACGTC	ARGGGNYYYALDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1714   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATAACTAATTATTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   ...............................G......C.G..G...C........C........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  F  Y  S  G  I  T  S  Y  T  P  S  L  Q  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_1714   91   TGGATTGGCTATATGTTTTACAGTGGGATCACCAGCTACACCCCCTCCCTCCAGAGTCGAGTCACCATGTCAGTCGACACGTCCAAGAAG  180
V  91.4% (223/244)  IGHV4-59*01  139  ........G.....C.A...........G.....A.....A..........A................A.....A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  I  S  L  E  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  N  Y  Y  Y  A  L 
                    Query_1714   181  CAGATCTCCCTGGAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGGGGGGGGTAATTACTACTACGCTTTG  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T........A......G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   ----------------------------------------------------------------.....---------------------  22
J  96.3% (52/54)    IGHJ6*02     9    ---------------------------------------------------------------------------..........G.A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1714   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  96.3% (52/54)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_201607

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	71	3	0	95.9
CDR1-IMGT	79	102	24	24	0	0	100
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	18	6	0	75
FR3-IMGT	178	291	114	106	8	0	93
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	294	273	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  G  F  G  Y  S  F  T  
                    Query_1715   5    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAGGGGTTTTGGATACAGCTTTACCA  94
V  92.9% (273/294)  IGHV5-51*01  2    ....G.............................................................A.....C.................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  L  I  F  P  N  D  F  D  A  R  Y  
                    Query_1715   95   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGTAAAGGCTTGGAGTGGATGGGCCTCATCTTTCCTAATGACTTCGATGCCAGATACA  184
V  92.9% (273/294)  IGHV5-51*01  92   ..................................G......C.............GA......A....GG.....CT...A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  
                    Query_1715   185  GTCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACA  274
V  92.9% (273/294)  IGHV5-51*01  182  .C.....................................A.........C...........G...............A.....T......  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_1715   275  CCGCCGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  364
V  92.9% (273/294)  IGHV5-51*01  272  .....A.G................------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD6-19*01  5    --------------------------............----------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_1715   365  CCTCAG  370
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_201600

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           304     1e-84
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCCCA	TATTATTATGACACTAGTGGTTATTA	TCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCCCATATTATTATGACACTAGTGGTTATTATCAGGCCTTTGCCTTC	ARDGPYYYDTSGYYQAFAF	237	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	17	7	0	70.8
FR3-IMGT	123	236	114	107	7	0	93.9
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	232	213	19	0	91.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  S  R  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  I  S  Y  I  
                    Query_1716   13   GTGCAGTCTCTGGATTCACCTTCAGTAGATATGGAATGAACTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGGAGTGGATTTCATACATTA  102
V  91.8% (213/232)  IGHV3-48*03  65   ......C.....................T....A...............C...........................G............  154
                                         A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  P  S  D  D  S  I  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  N  K  L  L  S  L  
                    Query_1716   103  GTCCTAGTGATGACAGCATATACTACGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCAACAAATTACTGTCTCTGC  192
V  91.8% (213/232)  IGHV3-48*03  155  ..AG.....G.AGT.C..................T..................A...................G..C.C.....A.....  244
                                      S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-----------------------CDR3-IMGT-------------
                                      Q  M  N  S  L  R  A  E  D  T  G  V  Y  Y  C  A  R  D  G  P  Y  Y  Y  D  T  S  G  Y  Y  Q  
                    Query_1716   193  AAATGAACAGCCTGAGAGCCGAGGACACGGGTGTTTATTACTGTGCGAGAGATGGCCCATATTATTATGACACTAGTGGTTATTATCAGG  282
V  91.8% (213/232)  IGHV3-48*03  245  ..............................C.....................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  88.5% (23/26)    IGHD3-22*01  2    -----------------------------------------------------------.....C.....T.G............-----  27

                                      ---------->                                  
                                      A  F  A  F  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_1716   283  CCTTTGCCTTCTGGGGCCAGGGATCCCTGGTCATCGTCTCCTCAG  327
J  90.9% (40/44)    IGHJ4*02     5    -.....A..A.............A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_201601

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           369     2e-104
IGHD6-19*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCA	AGTGGCTGG	CAAAGAGACTTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAAGTGGCTGGCAAAGAGACTTTCTTTGACTAC	ARDQVAGKETFFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_1717   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (243/250)  IGHV3-21*01  47   ........................................................A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  S  D  S  A  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1717   91   AGTGGGTCTCAGCCATTAGTAGTGATAGTGCTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (243/250)  IGHV3-21*01  137  ...........T...........AG....AG...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  D  Q  V  A  G  K  E  
                    Query_1717   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGCGAGAGATCAAGTGGCTGGCAAAGAGA  270
V  97.2% (243/250)  IGHV3-21*01  227  .........................................................A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-19*01  10   -------------------------------------------------------------------------.........--------  18

                                      ------------->                                  
                                      T  F  F  D  Y  W  G  Q  G  A  L  V  T  I  S  S  
                    Query_1717   271  CTTTCTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCATCTCCTCAG  318
J  95.5% (42/44)    IGHJ4*02     5    ----......................A...........G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_201602

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           352     3e-99
IGHD3-3*01                                                                                            14.1    8.2  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	113	1	0	99.1
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	236	11	0	95.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_1718   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGCC  93
V  95.5% (236/247)  IGHV4-31*02  50   .....TCC...A.....................C......C.............................C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_1718   94   TGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  95.5% (236/247)  IGHV4-31*02  140  ....G.........T.C.........................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  S  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  
                    Query_1718   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGGCTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCG  273
V  95.5% (236/247)  IGHV4-31*02  230  ................................A..................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  100.0% (51/51)   IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1718   274  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (51/51)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_201603

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_1719   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1719   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_1719   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1719   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_331614

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           374     8e-106
IGHD1-26*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GTTCCGTAGG	AGTGGGAGCTACTAC	ACTTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGTTCCGTAGGAGTGGGAGCTACTACACTTTGGTACTTTGACTAC	AKGSVGVGATTLWYFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	244	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  M  G  L  
                    Query_1720   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGATGGGGCTGG  90
V  98.0% (244/249)  IGHV3-23*01  47   .................................................................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  R  S  T  Y  Y  A  D  S  V  K  G  R  F  T  F  S  R  D  N  S  
                    Query_1720   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTCGCAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCTTCTCCAGAGACAATTCCA  180
V  98.0% (244/249)  IGHV3-23*01  137  .............................G.T.......................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  S  V  G  V  G  A  
                    Query_1720   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAAGGTTCCGTAGGAGTGGGAGCTA  270
V  98.0% (244/249)  IGHV3-23*01  227  ....................................................A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD1-26*01  6    -------------------------------------------------------------------------------...........  16

                                      GT-------------------->                                  
                                      T  T  L  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1720   271  CTACACTTTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (15/15)   IGHD1-26*01  17   ....-----------------------------------------------------  20
J  100.0% (46/46)   IGHJ4*02     3    -----------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_213915

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           380     1e-107
IGHD2-2*01                                                                                            19.9    0.18  
IGHJ6*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGGGCTGCATCTTGCAGCG	GTACTAGCTGCTA	CGATTTAGG	CGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGGGCTGCATCTTGCAGCGGTACTAGCTGCTACGATTTAGGCGGAATGGACGTC	ARRAASCSGTSCYDLGGMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  L  G  S  G  Y  N  F  A  K  Y
                    Query_1721   1    GCAGCTGGTGCAGTCTGGAGCAGAGCTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCTGGGTTCTGGATACAACTTTGCCAAATA  90
V  92.0% (266/289)  IGHV5-51*03  6    .........................G...................................AA..............G....A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  T  I  Y  P  S  D  S  D  T  R  Y  S  P
                    Query_1721   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGACCATCTATCCTTCTGACTCTGATACCCGATACAGCCC  180
V  92.0% (266/289)  IGHV5-51*03  96   ........G............................................T..........GG.............A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  L  S  I  A  Y  L  Q  W  S  S  L  R  G  P  D  T  A
                    Query_1721   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCCTCTCCATCGCCTATCTGCAGTGGAGCAGCCTGAGGGGCCCGGACACCGC  270
V  92.0% (266/289)  IGHV5-51*03  186  .............................C..........A..AG..C......C...................A..C.T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        T  Y  Y  C  A  R  R  A  A  S  C  S  G  T  S  C  Y  D  L  G  G  M  D  V  W  G  H  G  T  T
                    Query_1721   271  CACTTATTACTGTGCGAGAAGGGCTGCATCTTGCAGCGGTACTAGCTGCTACGATTTAGGCGGAATGGACGTCTGGGGCCACGGGACCAC  360
V  92.0% (266/289)  IGHV5-51*03  276  ..TG...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  92.3% (12/13)    IGHD2-2*01   15   --------------------------------------....C........---------------------------------------  27
J  93.5% (43/46)    IGHJ6*02     17   ------------------------------------------------------------...T.................A........  46

                                                      
                                        V  I  V  S  S 
                    Query_1721   361  GGTCATCGTCTCCTCA  376
J  93.5% (43/46)    IGHJ6*02     47   .....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_234709

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           266     2e-73
IGHD3-16*01                                                                                           12.2    33   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GATCTCCCATTG	TTATGA	GCGGGGCACGGTTTTCGAGTCGGGCTCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTCCCATTGTTATGAGCGGGGCACGGTTTTCGAGTCGGGCTCCCCTTGACCAC	ARSPIVMSGARFSSRAPLDH	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	94	20	0	82.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	208	38	0	84.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  K  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1722   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACCTTCACCAAACATGCCCTGAGCTGGGTCCGACAGGCTCCAGGGAAGGGACTAC  90
V  84.6% (208/246)  IGHV3-23*01  47   ...............................A........T.G..GCT.....A.............C.................G..GG  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  T  I  S  G  D  G  R  A  T  S  T  L  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1722   91   AGTGGGTCTCAACTATTAGTGGTGATGGTCGTGCCACGTCCACCTTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  84.6% (208/246)  IGHV3-23*01  137  ...........G...........AG....G..AG...A.A.TA.GC............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      I  N  T  L  F  L  Q  L  T  S  L  R  V  D  D  S  A  L  Y  Y  C  A  R  S  P  I  V  M  S  G  
                    Query_1722   181  TCAACACTTTATTTCTGCAACTGACCAGCCTGAGAGTCGACGACTCGGCCCTCTACTATTGTGCGAGATCTCCCATTGTTATGAGCGGGG  270
V  84.6% (208/246)  IGHV3-23*01  227  AG.....GC.G.A.......A...A...........C...G...A.....G.A..T..C.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-16*01  4    ------------------------------------------------------------------------------......------  9

                                      R3-IMGT------------------------>                                  
                                      A  R  F  S  S  R  A  P  L  D  H  W  G  Q  G  T  L  V  T  V  T  S  
                    Query_1722   271  CACGGTTTTCGAGTCGGGCTCCCCTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCACTTCAG  336
J  92.9% (39/42)    IGHJ4*02     7    ------------------------.....T.............................T.C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_308599

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           318     6e-89
IGHD3-3*01                                                                                            14.1    8.3  
IGHJ5*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAA	GGCTGCGGACTGGG	ATTACGGTTT	N/A	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAGGCTGCGGACTGGGATTACGGTTTCTGGTTTGACCAC	GKAADWDYGFWFDH	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1723   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCGCCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (225/247)  IGHV3-23*01  47   ............................................AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  G  S  H  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1723   91   AGTGGGTCTCAGGTATTAGTGGTGGTTCTCATAATACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.1% (225/247)  IGHV3-23*01  137  ............C..........A..GG.GG..GC.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  L  R  M  N  N  L  R  A  E  D  A  A  L  Y  Y  C  G  K  A  A  D  W  D  Y  G  
                    Query_1723   181  AGAACACGCTCTCTCTGCGCATGAACAATCTCAGAGCCGAGGACGCGGCCCTATACTACTGTGGGAAGGCTGCGGACTGGGATTACGGTT  270
V  91.1% (225/247)  IGHV3-23*01  227  ..........G.A.....AA.......GC..G............A.....G....T.......C...-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.0% (9/10)     IGHD3-3*01   3    ---------------------------------------------------------------------------------......A..  11

                                      ------------->                                  
                                      F  W  F  D  H  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_1723   271  TCTGGTTTGACCACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
D  90.0% (9/10)     IGHD3-3*01   12   .-----------------------------------------------  12
J  93.6% (44/47)    IGHJ5*02     5    -......C....C..............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_60279

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD5-12*01                                                                                           16.1    2.5   
IGHJ2*01                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAC	GGATGAGAGA	TGGCTACAATT	TTGTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACGGATGAGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTC	ATRMRDGYNFVDWYFDL	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  N  F  A  N  Y
                    Query_1724   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAACTTTGCCAACTA  90
V  95.9% (278/290)  IGHV5-51*01  6    .................................................................G...........G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_1724   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  95.9% (278/290)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  H  W  S  S  L  Q  A  S  D  P  A
                    Query_1724   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCACTGGAGTAGCCTCCAGGCCTCGGACCCCGC  270
V  95.9% (278/290)  IGHV5-51*01  186  .........................................T..................G.....C.....GA...........A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  T  R  M  R  D  G  Y  N  F  V  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V
                    Query_1724   271  CATGTATTACTGTGCGACACGGATGAGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGT  360
V  95.9% (278/290)  IGHV5-51*01  276  .................G..----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  90.9% (10/11)    IGHD5-12*01  11   ------------------------------.......G...-------------------------------------------------  21
J  100.0% (51/51)   IGHJ2*01     3    -----------------------------------------------...........................................  45

                                              
                                        S  S  
                    Query_1724   361  CTCCTCAG  368
J  100.0% (51/51)   IGHJ2*01     46   ........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_60278

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_1725   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.4% (228/244)  IGHV4-59*01  50   .....TCC...A..........................A...G...........G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N  
                    Query_1725   94   GGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACC  183
V  93.4% (228/244)  IGHV4-59*01  140  .......G..................A...............C...................................C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D  
                    Query_1725   184  AGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGACG  273
V  93.4% (228/244)  IGHV4-59*01  230  ........C....G.....C..........................G...........G.....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  94.8% (55/58)    IGHJ6*02     5    -------------------------------------------------------------------.....AC................  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_1725   274  TCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  308
J  94.8% (55/58)    IGHJ6*02     28   ........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_59723

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           353     9e-100
IGHD3-10*01                                                                                           18.0    0.58  
IGHJ3*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCCCGGGAC	GAGTTATTA	C	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCCCGGGACGAGTTATTACGATGGTTTTGAAATC	AREPGTSYYDGFEI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  P  
                    Query_1726   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGCAAGGGGCCGG  90
V  95.2% (238/250)  IGHV3-48*03  47   ...........................................T...................................G.......T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  G  G  T  I  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1726   91   AGTGGGTTTCATACATTAGTACTGGTGGTACTATCAAATACTACGCAGACTCTGTGAAGGGCCGATTCACCATTTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-48*03  137  .....................G.A......G..C..T....................................C................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  N  S  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  P  G  T  S  Y  Y  
                    Query_1726   181  GGAACTCACTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGCGAGAGAGCCCGGGACGAGTTATTACG  270
V  95.2% (238/250)  IGHV3-48*03  227  A...........A.....................................G...................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD3-10*01  19   -------------------------------------------------------------------------------.........--  27
J  93.9% (46/49)    IGHJ3*02     2    -----------------------------------------------------------------------------------------.  2

                                      ------------->                                  
                                      D  G  F  E  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1726   271  ATGGTTTTGAAATCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  318
J  93.9% (46/49)    IGHJ3*02     3    ...C......T..................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_60273

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_1727   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_1727   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_1727   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1727   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_60272

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           408     4e-116
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCCCCCGTGTTCTTCTC	GGTTCGGGGAGTAATTAT	CT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCCCCGTGTTCTTCTCGGTTCGGGGAGTAATTATCTC	ARTPRVLLGSGSNYL	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  G  S  Y
                    Query_1728   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCGGCAGTTA  90
V  95.2% (275/289)  IGHV1-69*01  6    ..................................................................................A....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        P  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  V  I  L  I  F  G  T  T  K  Y  A  Q
                    Query_1728   91   TCCTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGAGTGGTCATCCTTATCTTTGGTACAACAAAGTACGCACA  180
V  95.2% (275/289)  IGHV1-69*01  96   .G...............................A...................G.A......C.............G....C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  M  S  S  L  R  S  E  D  T  A
                    Query_1728   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACCAGCACAGCCTATATGGAAATGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.2% (275/289)  IGHV1-69*01  186  ..........................................G...........C.....GC............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  T  P  R  V  L  L  G  S  G  S  N  Y  L  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1728   271  CGTTTATTACTGTGCGAGAACCCCCCGTGTTCTTCTCGGTTCGGGGAGTAATTATCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.2% (275/289)  IGHV1-69*01  276  ...G...............-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  94.4% (17/18)    IGHD3-10*01  11   -------------------------------------............T.....-----------------------------------  28
J  100.0% (35/35)   IGHJ4*02     14   ---------------------------------------------------------.................................  46

                                        
                                        
                    Query_1728   361  AG  362
J  100.0% (35/35)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_60271

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           350     9e-99
IGHD2-15*01                                                                                           21.8    0.043
IGHJ5*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGGGTATTCTGTTGC	GGTGGTAGGTGCTA	GTG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGGGTATTCTGTTGCGGTGGTAGGTGCTAGTGACAACTGGTTCGACCCC	ARHGGYSVAVVGASDNWFDP	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  N  S  I  Y  Y  W  A  W  I  R  Q  P  P  G  K  G  
                    Query_1729   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAATAGTATTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  94.8% (237/250)  IGHV4-39*01  50   .....TCC...A....C.......................C.G.....G...........G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_1729   94   TGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGGGTCACCATATCCGTAGACACGTCCA  183
V  94.8% (237/250)  IGHV4-39*01  140  ................................................................A.........................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  V  S  L  K  L  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  H  G  G  Y  S  V  A  
                    Query_1729   184  AGAATCAGGTCTCCCTGAAGCTGAGCTCTATGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATGGCGGGTATTCTGTTGCGG  273
V  94.8% (237/250)  IGHV4-39*01  230  ....C...T....................G........................................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  92.9% (13/14)    IGHD2-15*01  14   ----------------------------------------------------------------------------------------..  15

                                      R3-IMGT------------------------>                                  
                                      V  V  G  A  S  D  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1729   274  TGGTAGGTGCTAGTGACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  92.9% (13/14)    IGHD2-15*01  16   ......C.....------------------------------------------------------  27
J  100.0% (51/51)   IGHJ5*02     1    ---------------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_60270

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-13*01                                                                                           369     2e-104
IGHJ2*01                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-13*01	N/A	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	CCCCTTTAGGTG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCCCCTTTAGGTGACTGGTACTTCGATCTC	ARAPLGDWYFDL	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	241	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  D  M  H  W  V  R  Q  A  T  G  K  G  L  
                    Query_1730   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTCCTACGACATGCACTGGGTCCGCCAAGCTACAGGAAAAGGTCTGG  90
V  98.0% (241/246)  IGHV3-13*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  D  M  H  W  V  R  Q  A  T  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  A  T  A  G  D  T  Y  Y  P  G  S  V  K  G  R  F  T  I  S  R  E  S  A  K  
                    Query_1730   91   AGTGGGTCTCAGCTATTGCTACTGCTGGTGACACATACTATCCAGGCTCCGTGAAGGGCCGATTCACCATCTCCAGAGAAAGTGCCAAGA  180
V  98.0% (241/246)  IGHV3-13*01  137  ..................G..............................................................A........  226
                                      E  W  V  S  A  I  G  T  A  G  D  T  Y  Y  P  G  S  V  K  G  R  F  T  I  S  R  E  N  A  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  S  L  Y  L  Q  I  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R  A  P  L  G  D  W  Y  F  
                    Query_1730   181  ACTCCTTGTATCTTCAAATAAACAGCCTGAGAGCCGGGGACACGGCTGTGTATTACTGTGCAAGAGCCCCTTTAGGTGACTGGTACTTCG  270
V  98.0% (241/246)  IGHV3-13*01  227  ...................G..............................................------------------------  292
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R                          
J  98.0% (50/51)    IGHJ2*01     3    ------------------------------------------------------------------------------............  14

                                      ---->                                  
                                      D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_1730   271  ATCTCTGGGGCCGTGGCACCCTGGTCACAGTCTCCTCAG  309
J  98.0% (50/51)    IGHJ2*01     15   ............................T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_60277

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           366     2e-103
IGHD3-10*01                                                                                           10.3    122   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGACGGTTTAGCGATGGCCGTCCGA	CGGGG	N/A	CTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGACGGTTTAGCGATGGCCGTCCGACGGGGCTTTAATTAC	AKDDGLAMAVRRGFNY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1731   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-30*18  47   ...................................................G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  H  D  G  I  N  K  Y  Y  P  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1731   91   AGTGGGTGGCAGTTATATCACACGATGGAATTAATAAATACTATCCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.8% (242/250)  IGHV3-30*18  137  ....................T.T.......G.............G.............................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  S  V  Y  Y  C  A  K  D  D  G  L  A  M  A  
                    Query_1731   181  AGAACACCCTGTATCTGCAAATGGACAGCCTGAGAGCTGAGGACACGTCTGTGTATTACTGTGCGAAAGATGACGGTTTAGCGATGGCCG  270
V  96.8% (242/250)  IGHV3-30*18  227  .......G...............A.......................G......................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      T------------------>                                  
                                      V  R  R  G  F  N  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1731   271  TCCGACGGGGCTTTAATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (5/5)     IGHD3-10*01  15   -----.....--------------------------------------------  19
J  95.5% (42/44)    IGHJ4*02     5    ----------....G.C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_60276

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           316     2e-88
IGHD2-15*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	TCCTCTC	GGTGGTA	ACCGACC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGATCCTCTCGGTGGTAACCGACCCTTTGCCTAC	AGDPLGGNRPFAY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  D  M  N  W  L  R  Q  A  P  G  K  G  P  
                    Query_1732   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACTTTCAGTAATTACGACATGAACTGGCTCCGCCAGGCTCCTGGGAAGGGGCCGG  90
V  90.4% (226/250)  IGHV3-21*01  47   .....................C...............C.......GC..TAG..........G.............A..........T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  D  I  T  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_1732   91   AGTGGGTCTCATCCATTAGTAGTCGTGGAGATATCACATACTACGCGGACTCAGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.4% (226/250)  IGHV3-21*01  137  .......................A..A.TAG.TA..T.........A.........A.................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  S  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  G  D  P  L  G  G  N  R  
                    Query_1732   181  AGAACTCACTGTCCCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCTGTGTATTACTGTGCGGGAGATCCTCTCGGTGGTAACCGAC  270
V  90.4% (226/250)  IGHV3-21*01  227  ............AT......................C............................A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-15*01  14   -----------------------------------------------------------------------------.......------  20

                                      ---------->                                  
                                      P  F  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1732   271  CCTTTGCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (43/44)    IGHJ4*02     5    -.....A......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_339378

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           355     3e-100
IGHD3-16*02                                                                                           52.6    2e-11 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD3-16*02	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AG	ATTATGATTACGTTTGGGGGAGTTATC	TCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGATTATGATTACGTTTGGGGGAGTTATCTCCACTAC	AREDYDYVWGSYLHY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  F  D  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1733   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCGACAGTACTTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*02  49   ..................................C..T.....G...C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  E  D  T  S  K  N 
                    Query_1733   91   TGGATTGGATATATTAATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGAAGACACGTCCAAGAAC  180
V  96.3% (236/245)  IGHV4-59*02  139  ........G.....CT.........................................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  D  Y  D  Y  V  W  G  S 
                    Query_1733   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTACTACTGTGCGAGAGAAGATTATGATTACGTTTGGGGGAGT  270
V  96.3% (236/245)  IGHV4-59*02  229  ..................................................T..............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (27/27)   IGHD3-16*02  3    -------------------------------------------------------------------.......................  25

                                      ----------->                                  
                                       Y  L  H  Y  *  G  Q  G  T  L  V  T  V  S  S  
                    Query_1733   271  TATCTCCACTACTGAGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (27/27)   IGHD3-16*02  26   ....------------------------------------------  29
J  97.4% (38/39)    IGHJ4*02     10   -------.......G...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_340223

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           383     1e-108
IGHD2-8*01                                                                                            19.9    0.17  
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGGTAGG	ATGGTGTATG	ATTCAAGGGG	CTGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGGTAGGATGGTGTATGATTCAAGGGGCTGCTTCGACCCC	ARLGRMVYDSRGCFDP	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  N  Y
                    Query_1734   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCCCTGAAGATCTCCTGTAAGGGTTCCGGATACACTTTTAGCAACTA  90
V  92.4% (267/289)  IGHV5-51*03  6    ..............................A..............T.......................T.......GC....C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  L  G  K  G  L  E  W  L  G  S  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_1734   91   CTGGATCGGCTGGGTGCGCCAGATGCTCGGGAAAGGCCTGGAGTGGCTGGGGAGTATCTATCCCGGTGACTCTGATACCAGATACAACCC  180
V  92.4% (267/289)  IGHV5-51*03  96   ..........................C...................A......TC........T......................G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        T  F  Q  G  R  V  T  M  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  K  L  E  A  S  D  T  A
                    Query_1734   181  GACCTTCCAAGGCCGGGTCACCATGTCAGCCGACAAGTCCATCAACACCGCCTACCTCCAGTGGAGCAAGCTGGAGGCCTCGGACACCGC  270
V  92.4% (267/289)  IGHV5-51*03  186  .T............A.........C...................G............G..........GC...A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        I  Y  Y  C  A  R  L  G  R  M  V  Y  D  S  R  G  C  F  D  P  W  G  Q  G  T  L  V  T  V  S
                    Query_1734   271  CATCTATTACTGTGCGAGACTGGGTAGGATGGTGTATGATTCAAGGGGCTGCTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTC  360
V  92.4% (267/289)  IGHV5-51*03  276  ...G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD2-8*01   15   ----------------------------..........----------------------------------------------------  24
J  97.9% (46/47)    IGHJ5*02     5    ------------------------------------------------...G......................................  46

                                           
                                        S  
                    Query_1734   361  CTCAG  365
J  97.9% (46/47)    IGHJ5*02     47   .....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_102850

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         338     5e-95
IGHD6-13*01                                                                                           16.1    2.3  
IGHJ5*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GATGGAGTTACAACCTGTT	GCAGCTGTTGGTAC	GTCCCGATTCCTT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGATGGAGTTACAACCTGTTGCAGCTGTTGGTACGTCCCGATTCCTTGACCTC	AREMELQPVAAVGTSRFLDL	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  F  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1735     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCAGCTACTTTATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGACTGG  90
V  93.2% (233/250)  IGHV3-30-3*01  47   ...........................................T.....TGC..................G........C.....G....  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        D  W  V  A  L  I  S  S  D  G  S  D  K  N  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_1735     91   ACTGGGTGGCACTTATATCATCTGATGGAAGCGATAAAAACTACGCAGACTCCGTGAAGGGACGATTCTCCATCTCCAGAGACAATTCCA  180
V  93.2% (233/250)  IGHV3-30-3*01  137  .G.........G.........A..........A.....T......................C......A.....................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------------CD
                                        K  T  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  E  M  E  L  Q  P  V  
                    Query_1735     181  AGACCACGCTGTATCTGCAAATGAGCAGCCTGAGAGCTGAGGACACGGCTGTGTATTTCTGTGCGAGAGAGATGGAGTTACAACCTGTTG  270
V  93.2% (233/250)  IGHV3-30-3*01  227  ...A....................A................................A............--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  85.7% (12/14)    IGHD6-13*01    8    -----------------------------------------------------------------------------------------.  8

                                        R3-IMGT------------------------>                                  
                                        A  A  V  G  T  S  R  F  L  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1735     271  CAGCTGTTGGTACGTCCCGATTCCTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  85.7% (12/14)    IGHD6-13*01    9    ....A.C......-----------------------------------------------------  21
J  97.5% (39/40)    IGHJ5*02       12   --------------------------....C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_102853

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           353     9e-100
IGHD6-19*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGCAGGA	AGTGGCTGG	CCCCGGGGTCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGCAGGAAGTGGCTGGCCCCGGGGTCATTTTGACTAC	ARVAGSGWPRGHFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_1736   1    ACCCTGTCCCTCACCTGCACTGTCTCCGGTGGATCCGTCAGCAGTAGTAGTTACTATTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGA  90
V  95.2% (238/250)  IGHV4-61*01  49   ..........................T.....C............G..........C.......................A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  E  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S 
                    Query_1736   91   CTGGAGTGGATTGAGTATATCTATTACAGGGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCGTATCAGTCGACACGTCC  180
V  95.2% (238/250)  IGHV4-61*01  139  .............G...............T....G.....................................A.......A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  A  G  S  G  W  P 
                    Query_1736   181  AAGAACCAGTTCTCCCTGAAACTGAGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTAGCAGGAAGTGGCTGGCCC  270
V  95.2% (238/250)  IGHV4-61*01  229  ....................G.....C...........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD6-19*01  10   ------------------------------------------------------------------------------.........---  18

                                      ----------------->                                
                                       R  G  H  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S
                    Query_1736   271  CGGGGTCATTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTC  320
J  97.6% (40/41)    IGHJ4*02     6    ---------......................C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_102852

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           392     2e-111
IGHD3-3*01                                                                                            19.9    0.17  
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCA	GAGTGCTTATTAT	TT	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGATCAGAGTGCTTATTATTTCAACTACTTCGACCCC	TRDQSAYYFNYFDP	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	6	2	0	75
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  T  V  S  C  K  A  S  G  Y  T  F  I  N  Y
                    Query_1737   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGACGGTCTCCTGCAAGGCATCTGGATACACGTTCATCAACTA  90
V  93.1% (271/291)  IGHV1-46*01  6    ..................G.............A.................A...T.......................C....C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  H  P  S  A  G  T  T  Y  Y  A  R
                    Query_1737   91   CTATATACACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCCACCCTAGTGCTGGTACCACATACTACGCACG  180
V  93.1% (271/291)  IGHV1-46*01  96   ......G...................................................A.........G.....G....AG........A  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_1737   181  GAAATTCCAGGGCAGAGTCACCATGACCACGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGTAGCCTGAGATCTGAGGACACGGC  270
V  93.1% (271/291)  IGHV1-46*01  186  ...G.........................G....................................C.......................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  T  R  D  Q  S  A  Y  Y  F  N  Y  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1737   271  CGTTTATTACTGTACAAGAGATCAGAGTGCTTATTATTTCAACTACTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.1% (271/291)  IGHV1-46*01  276  ...G.........G.G.....--------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                       
D  92.3% (12/13)    IGHD3-3*01   16   ------------------------.....G.......----------------------------------------------------  28
J  96.0% (48/50)    IGHJ5*02     2    ---------------------------------------.....GG...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_102854

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           325     3e-91
IGHD1-1*01                                                                                            23.8    0.011
IGHJ3*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCACA	ACT	TACAACTGGAAC	TTAGATGGTGTCA	ATGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAACTTACAACTGGAACTTAGATGGTGTCAATGTTTTTGATGTC	ATTYNWNLDGVNVFDV	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	105	9	0	92.1
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	231	23	0	90.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  R  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1738   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTCTCAGTAGGGCCTGGATGACCTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  90.9% (231/254)  IGHV3-15*01  47   .......T..............................T......AC..........G...............T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  I  G  R  I  K  T  T  T  E  G  G  T  T  D  Y  A  A  P  V  R  G  R  F  T  M  S  R  D  
                    Query_1738   91   AATGGATTGGCCGTATTAAAACCACCACCGAAGGTGGGACAACAGACTACGCTGCACCCGTGAGAGGCAGATTCACCATGTCAAGAGACG  180
V  90.9% (231/254)  IGHV3-15*01  137  .G...G...............G..AA..T..T...............................A...............C........T.  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  R  N  T  L  F  L  Q  I  N  S  L  K  T  E  D  T  A  L  Y  Y  C  A  T  T  Y  N  W  N  
                    Query_1738   181  ATTCAAGAAACACACTGTTTCTTCAAATAAACAGCCTGAAAACCGAGGACACAGCCCTGTATTACTGTGCCACAACTTACAACTGGAACT  270
V  90.9% (231/254)  IGHV3-15*01  227  ......A......G....A...G.....G...........................G...........A.....----------------  300
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (12/12)   IGHD1-1*01   3    -----------------------------------------------------------------------------............-  14

                                      R3-IMGT------------------>                                  
                                      L  D  G  V  N  V  F  D  V  W  G  Q  G  T  Q  V  P  V  S  S  
                    Query_1738   271  TAGATGGTGTCAATGTTTTTGATGTCTGGGGCCAAGGGACACAGGTCCCCGTCTCTTCAG  330
J  91.7% (44/48)    IGHJ3*01     3    ------------...C.........................AT....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_268409

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           339     2e-95
IGHD2-2*01                                                                                            23.8    0.012
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	GCATCGTACAAAT	TATTGTAGTGGTACC	GACTGTTATC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGGCATCGTACAAATTATTGTAGTGGTACCGACTGTTATCACTGGTTCGACCCC	SRHRTNYCSGTDCYHWFDP	261	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	74	24	20	4	0	83.3
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	106	8	0	93
CDR3-IMGT (germline)	261	265	5	4	1	0	80
Total	N/A	N/A	265	241	24	0	90.9


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  E  K  P  S  E  T  L  S  L  T  C  A  V  L  N  G  S  F  S  D  Y  F  W  S  W  I  R  
                    Query_1739   1    CAGGACTGGAGAAGCCCTCGGAGACCCTGTCCCTCACCTGCGCTGTCTTGAATGGGTCCTTCAGTGATTACTTCTGGAGCTGGATCCGCC  90
V  90.9% (241/265)  IGHV4-34*01  26   ........TT......T...............................ATGG..............G.....A.................  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  S  P  G  K  G  L  E  W  I  G  Q  I  N  H  G  G  Y  T  N  Y  S  P  S  L  K  S  R  V  T  
                    Query_1739   91   AGTCCCCAGGGAAGGGGCTGGAGTGGATTGGGCAAATCAATCATGGTGGATACACTAACTACAGTCCGTCCCTCAAGAGTCGAGTCACCA  180
V  90.9% (241/265)  IGHV4-34*01  116  ..C.............................G...........A.....AG...C.......AC.........................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  L  Y  F  C  S  R  H  
                    Query_1739   181  TATCAGTGGACACGTCCAAGAACCAGTTCTCCCTGAGGCTCAGCTCTGTGACCGCCGCGGACACGGCTCTGTATTTTTGTTCGAGGCATC  270
V  90.9% (241/265)  IGHV4-34*01  206  .......A............................A...G...........................G......AC...G....-----  290
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A        

                                      --------------CDR3-IMGT----------------------->                                  
                                      R  T  N  Y  C  S  G  T  D  C  Y  H  W  F  D  P  W  G  Q  G  T  L  V  T  I  S  S  
                    Query_1739   271  GTACAAATTATTGTAGTGGTACCGACTGTTATCACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCATCTCCTCAG  351
D  93.3% (14/15)    IGHD2-2*01   5    --------.........A.....----------------------------------------------------------  19
J  97.9% (47/48)    IGHJ5*02     4    ---------------------------------......................................G.........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_268408

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	269	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_1740   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTCAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  94.1% (269/286)  IGHV5-51*01  6    ................................................G.................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  P  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_1740   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCCGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  94.1% (269/286)  IGHV5-51*01  96   ......................A.......G.......T.....G..........................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  T  S  V  N  T  A  Y  L  Q  W  S  T  L  G  A  S  D  T  A
                    Query_1740   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACACGTCCGTCAACACCGCCTACCTGCAGTGGAGCACCCTGGGGGCCTCCGACACCGC  270
V  94.1% (269/286)  IGHV5-51*01  186  ....................C..............A....A...G.......................G....AA......G........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1740   271  CATATATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  94.1% (269/286)  IGHV5-51*01  276  ...G............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_102859

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCTACGAGGCGAGTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATATCTACGAGGCGAGTCATCAATATAGTGGCTACATGATTAATGACTAT	GKDIYEASHQYSGYMINDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1741   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGATATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-23*01  47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  G  I  S  E  S  G  G  S  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1741   91   ATTGGGTCTCAGGCATTAGTGAAAGTGGTGGTAGCACAAACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  94.8% (237/250)  IGHV3-23*01  137  .G..........CT.......GT...............T...............................................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  I  S  L  R  A  E  D  T  A  V  Y  Y  C  G  K  D  I  Y  E  A  S  H  
                    Query_1741   181  AGAACACCCTGTATCTACAAATGATCAGCCTCAGAGCCGAGGACACGGCCGTATATTACTGTGGGAAAGATATCTACGAGGCGAGTCATC  270
V  94.8% (237/250)  IGHV3-23*01  227  .......G........G.......A......G...............................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_1741   271  AATATAGTGGCTACATGATTAATGACTATTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  95.1% (39/41)    IGHJ4*02     8    ----------------------......C......................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_102858

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           329     3e-92
IGHD3-16*01                                                                                           12.2    31   
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GAGGAGAGACACG	GGGGGA	N/A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGAGAGGAGAGACACGGGGGGAGATGCTCTTCATATC	ATERRDTGGDALHI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  D  Y  E  F  N  W  V  R  Q  A  P  E  K  G  L  
                    Query_1742   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTCAGTGACTATGAATTCAACTGGGTCCGCCAGGCTCCGGAGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-48*03  47   .....................C......................AGT......A.G....................A.G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  W  S  D  G  S  P  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  I  
                    Query_1742   91   AGTGGGTTTCATACATTTGGAGTGATGGAAGTCCCACATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACATCA  180
V  92.0% (230/250)  IGHV3-48*03  137  .................A.T...AG...T...A...T.................................................GC..  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  T  S  L  R  A  E  D  T  A  I  Y  Y  C  A  T  E  R  R  D  T  G  G  
                    Query_1742   181  AGAACTCACTGTATCTGCAAATGACCAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGACAGAGAGGAGAGACACGGGGGGAG  270
V  92.0% (230/250)  IGHV3-48*03  227  ........................A.........................G...............G...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  18   -----------------------------------------------------------------------------------......-  23
J  91.8% (45/49)    IGHJ3*02     2    -----------------------------------------------------------------------------------------.  2

                                      ------------->                                  
                                      D  A  L  H  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1742   271  ATGCTCTTCATATCTGGGGCCAGGGAACAATGGTCACCGTCTCTTCAG  318
J  91.8% (45/49)    IGHJ3*02     3    .....T..G.............A..G......................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_268403

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           330     1e-92
IGHD1-7*01                                                                                            12.2    31   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	TCGGGGTGGGG	GGAACT	CGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGATCGGGGTGGGGGGAACTCGGGGACTACTTTGACTAC	ARSGWGELGDYFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  I  S  W  V  R  Q  A  P  G  K  R  L  
                    Query_1743   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATAAGCTGGGTCCGCCAGGCTCCAGGGAAGAGGCTGG  90
V  93.1% (228/245)  IGHV3-53*01  47   .......................................................G...........................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  S  I  F  S  N  G  N  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_1743   91   AGTGGGTCTCAAGCATTTTTAGTAATGGTAACACATACTACACTGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.1% (228/245)  IGHV3-53*01  137  ...........GTT....A...CGG.....G..........G.A..............................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  V  Y  L  Q  V  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  G  W  G  E  L  G  D  
                    Query_1743   181  ACACGGTGTATCTTCAGGTGCACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCAAGATCGGGGTGGGGGGAACTCGGGGACT  270
V  93.1% (228/245)  IGHV3-53*01  227  .....C..........AA..A........................................G...-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (6/6)     IGHD1-7*01   10   ----------------------------------------------------------------------------......--------  15
J  95.8% (46/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  F  D  Y  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_1743   271  ACTTTGACTACTGGGGCCAGGGATCCCTGGTCATCGTCTCCTCAG  315
J  95.8% (46/48)    IGHJ4*02     4    .......................A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_268402

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           16.1    2.6  
IGHJ3*01                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGATCCCTT	CTATGATA	CTACAGGAAGTTATTCCTTTGACCTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACATATGGATCCCTTCTATGATACTACAGGAAGTTATTCCTTTGACCTT	VRHMDPFYDTTGSYSFDL	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	93	21	0	81.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	252	39	0	86.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  V  S  G  Y  R  F  T  S  K
                    Query_1744   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGAGTCTCTGGATACAGGTTTACCAGCAA  90
V  86.6% (252/291)  IGHV5-51*01  6    ....................................C.........................AG.GT...........C.........T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  H  M  P  G  Q  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_1744   91   ATGGATCGCCTGGGTGCGCCACATGCCCGGACAGGGCCTGGAGTGGATGGGCGTCATCTATCCCGGAGACTCTGATACCAGATACAACCC  180
V  86.6% (252/291)  IGHV5-51*01  96   C.......G............G........GA.A.................GA..........T..T...................G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  R  I  S  I  S  A  D  E  S  T  N  T  A  S  L  H  W  G  F  L  R  A  S  D  T  A
                    Query_1744   181  GTCCTTCCAAGGCCGGATCAGCATTTCAGCCGACGAGTCCACCAACACTGCCTCTCTGCACTGGGGCTTCCTGCGGGCCTCGGACACTGC  270
V  86.6% (252/291)  IGHV5-51*01  186  ..............A.G...C...C.........A......T..G...C....AC.....G...A..AG....AA............C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        I  Y  Y  C  V  R  H  M  D  P  F  Y  D  T  T  G  S  Y  S  F  D  L  W  G  Q  G  T  M  V  T
                    Query_1744   271  CATATACTATTGTGTGAGACATATGGATCCCTTCTATGATACTACAGGAAGTTATTCCTTTGACCTTTGGGGCCAAGGGACAATGGTCAC  360
V  86.6% (252/291)  IGHV5-51*01  276  ...G..T..C....C......---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-22*01  7    ---------------------------------........-------------------------------------------------  14
J  97.1% (33/34)    IGHJ3*01     17   -------------------------------------------------------------------.......................  39

                                                 
                                        V  S  S  
                    Query_1744   361  CGTCTCCTCAG  371
J  97.1% (33/34)    IGHJ3*01     40   ......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_205533

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_1745   1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  87.0% (214/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_1745   91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCACCATCTCAGTAGACAAGTCCAAG  180
V  87.0% (214/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A................A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_1745   181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  87.0% (214/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_1745   271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_305719

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           279     3e-77
IGHD1-20*01                                                                                           12.2    34   
IGHJ2*01                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-20*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGGCGCCCCAAGGGCCCCCTGATAATA	ATAACT	TCCGGCGAAAGAAA	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCGCCCCAAGGGCCCCCTGATAATAATAACTTCCGGCGAAAGAAATGGTACTTCGATCTC	ARAPQGPPDNNNFRRKKWYFDL	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	212	34	0	86.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  E  Y  S  L  T  T  Y  A  M  A  W  V  R  Q  A  P  G  K  G  L  
                    Query_1746   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGAATACTCTTTGACCACCTACGCCATGGCCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  86.2% (212/246)  IGHV3-23*01  47   .....................C........G..T.A.C..T.G..G...T......AG.........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  V  S  G  L  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1746   91   AATGGGTCTCGGGCGTTAGTGGCCTTGGTGGCAGCACATATTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  86.2% (212/246)  IGHV3-23*01  137  .G........A.CTA.......TAG......T........C..C..............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      R  N  T  L  Y  L  D  M  N  S  L  R  G  D  D  T  A  I  Y  Y  C  A  R  A  P  Q  G  P  P  D  
                    Query_1746   181  GGAACACCCTCTATTTGGACATGAACAGCCTAAGAGGCGACGACACGGCCATTTATTACTGTGCGAGGGCGCCCCAAGGGCCCCCTGATA  270
V  86.2% (212/246)  IGHV3-23*01  227  A......G..G...C..C.A...........G....C...G.........G.A.............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      -CDR3-IMGT--------------------------->                                
                                      N  N  N  F  R  R  K  K  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S
                    Query_1746   271  ATAATAACTTCCGGCGAAAGAAATGGTACTTCGATCTCTGGGGCCGAGGCACCCTGGTCACTGTCTCCTC  340
D  100.0% (6/6)     IGHD1-20*01  4    ---......-------------------------------------------------------------  9
J  97.9% (46/47)    IGHJ2*01     5    -----------------------.......................T.......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_305718

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           254     1e-69
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAGGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATAGCTATA	ATGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAGGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATAGCTATAATGTC	ARGLLIEDPNYVWGSFRRNHNSYNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	41	10	0	80.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	93	21	0	81.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	203	41	0	83.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  G  L  E 
                    Query_1747   1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  83.2% (203/244)  IGHV4-59*01  49   ..................A....C.......G.......A...G..........AG....A.C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  A  T  L  S  G  D  M  S  R  N 
                    Query_1747   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGCCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  83.2% (203/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A.T....A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  N  Y 
                    Query_1747   181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTCTTCTTATCGAGGATCCCAACTAT  270
V  83.2% (203/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GT.....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  N  S  Y  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_1747   271  GTTTGGGGGAGTTTTCGCCGCAATCACAATAGCTATAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  94.9% (37/39)    IGHJ3*01     12   -------------------------------------....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_325077

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           385     5e-109
IGHD3-3*01                                                                                            18.0    0.68  
IGHJ5*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATCACGGCCCGCTAGTGGTACG	GGTTATTAT	GGACCG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATCACGGCCCGCTAGTGGTACGGGTTATTATGGACCGAACTGCTTCGACCCC	ARGSRPASGTGYYGPNCFDP	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	16	8	0	66.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  A  S  G  D  S  F  S  G  Y
                    Query_1748   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGGCTTCAGGGGACTCCTTCAGTGGGTA  90
V  92.4% (268/290)  IGHV1-69*01  6    ..................G...........................................A......T..A.G.A.......CA.C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  I  P  I  L  G  S  A  N  H  A  Q
                    Query_1748   91   TGGAATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGTGATCATCCCTATCCTTGGTTCAGCAAACCACGCACA  180
V  92.4% (268/290)  IGHV1-69*01  96   ..CT....G............................................G.............T.....A........T.......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  K  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  T  E  D  T  A
                    Query_1748   181  GAAGTTCAAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGTTGAGCAGCCTGAGAACTGAAGACACGGC  270
V  92.4% (268/290)  IGHV1-69*01  186  .......C.....................................................C..............T....G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  F  C  A  R  G  S  R  P  A  S  G  T  G  Y  Y  G  P  N  C  F  D  P  W  G  Q  G  T  L
                    Query_1748   271  CATGTATTTCTGTGCGAGAGGATCACGGCCCGCTAGTGGTACGGGTTATTATGGACCGAACTGCTTCGACCCCTGGGGCCAGGGAACCCT  360
V  92.4% (268/290)  IGHV1-69*01  276  .G......A...........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (9/9)     IGHD3-3*01   20   -------------------------------------------.........--------------------------------------  28
J  98.0% (48/49)    IGHJ5*02     3    ----------------------------------------------------------.....G..........................  34

                                                       
                                        V  T  V  S  S  
                    Query_1748   361  GGTCACCGTCTCCTCAG  377
J  98.0% (48/49)    IGHJ5*02     35   .................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_305711

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            272     2e-75
IGHD1-26*01                                                                                           10.3    119  
IGHJ6*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-26*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACTTTCGCTTCGC	ACTAC	CTACATT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACTTTCGCTTCGCACTACCTACATTTGGACGTC	RELSLRTTYIWTS	242	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	29	22	6	1	75.9
CDR1-IMGT	29	55	27	22	5	0	81.5
FR2-IMGT	56	106	51	47	4	0	92.2
CDR2-IMGT	107	127	21	15	6	0	71.4
FR3-IMGT	128	241	114	101	13	0	88.6
CDR3-IMGT (germline)	242	247	6	6	0	0	100
Total	N/A	N/A	248	213	34	1	85.9


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C   L  S  L  V  A  P  S  P  L  I  S  G  G  L  G  S  A  S  P  Q  G  G  G 
                    Query_1749   1    GGTCCCTGAGACTCTCCTGT-CTGTCTCTGGTGGCTCCATCACCACTAATCAGTGGTGGACTTGGGTCCGCCAGCCCCCAGGGGGGGGGC  89
V  85.9% (213/248)  IGHV4-4*01   47   ..A.....TCC...A....CG.....................G..G..G.A.C.......G......................AA.....  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                       W  S  G  L  V  K  F  F  L  M  E  T  P  T  T  A  R  P  S  R  V  D  S  P  F  Q  W  L  S  P 
                    Query_1749   90   TGGAGTGGATTGGTGAAATTTTTCCTAATGGAAACACCAACTACAGCCCGTCCCTCAAGAGTCGACTCACCATTTCAATGGCTAAGTCCA  179
V  85.9% (213/248)  IGHV4-4*01   137  .............G.....C.A..A..G...G.G...........A...................G.......A...G.A.AC.......  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                       R  T  R  S  P  *  N  L  T  L  *  R  P  R  T  R  P  C  I  S  V  R  E  L  S  L  R  T  T  Y 
                    Query_1749   180  AGAACCAGGTCTCCCTGAAACTTAACTCTGTGACGGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAACTTTCGCTTCGCACTACCTAC  269
V  85.9% (213/248)  IGHV4-4*01   227  ........T..........G..G.G.........C......................G..........----------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  16   ---------------------------------------------------------------------------------.....----  20

                                      ---------->                              
                                       I  W  T  S  G  A  K  G  P  R  S  A  S  P
                    Query_1749   270  ATTTGGACGTCTGGGGCCAAGGGGCCACGGTCAGCGTCTCC  310
J  94.7% (36/38)    IGHJ6*02     22   ---....................A.........C.......  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_305710

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            325     3e-91
IGHD1-26*01                                                                                           12.2    32   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGTTTC	TATAGT	CGCGTTGGCTGCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTTTCTATAGTCGCGTTGGCTGCTTCTTTGACTAC	ARCFYSRVGCFFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  E  F  T  F  S  T  Y  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1750   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGAATTCACCTTTAGTACCTACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (228/248)  IGHV3-7*01   47   .....................C........G..............G...T.GG.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  R  H  D  E  T  V  K  T  Y  V  D  S  V  K  G  R  F  T  T  S  R  D  N  A  
                    Query_1750   91   AGTGGGTGGCAAACATAAGGCACGATGAAACTGTGAAAACCTATGTGGACTCTGTGAAGGGCCGATTCACCACGTCCAGAGACAACGCCA  180
V  91.9% (228/248)  IGHV3-7*01   137  ..........C.......A...A....G..G..A....TA................................TC................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  C  F  Y  S  R  V  G  
                    Query_1750   181  AGAACTCACTGTATCTGCAAATGGATAGCCTGAGACCTGAGGACACGGCTGTGTATTACTGTGCGAGATGTTTCTATAGTCGCGTTGGCT  270
V  91.9% (228/248)  IGHV3-7*01   227  .......................A.C.........G.C..............................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------......----------  8

                                      ------------->                                  
                                      C  F  F  D  Y  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_1750   271  GCTTCTTTGACTACTGGGGCCAGGGAGTGTTGGTCACCGTCTCCTCAG  318
J  90.9% (40/44)    IGHJ4*02     5    ----......................ACCC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_305712

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD4-17*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTATTA	ACGGTGATTAC	GAGGTTCTTGGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTATTAACGGTGATTACGAGGTTCTTGGGGACTAC	ARSINGDYEVLGDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  M  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_1751   4    CCCTGAGACTCTCCTGTACTGTGTCTGGTGGCTCCATGAGTAGTTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  92.1% (223/242)  IGHV4-59*01  50   .....TCC...A....C.....C..............C.................C..................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  N  I  F  Y  S  G  N  T  N  F  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S  
                    Query_1751   94   GGATTGGGAATATCTTCTACAGTGGGAACACCAACTTCAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAGCC  183
V  92.1% (223/242)  IGHV4-59*01  140  ........T......AT..........G........A....................................A.............A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  L  Y  Y  *  A  R  S  I  N  G  D  Y  E  V  L  
                    Query_1751   184  AGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCCTCTATTACTGAGCGAGAAGTATTAACGGTGATTACGAGGTTCTTG  273
V  92.1% (223/242)  IGHV4-59*01  230  ...................C........................G.G........T......----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  90.9% (10/11)    IGHD4-17*01  6    ---------------------------------------------------------------------.......C...----------  16

                                      ------->                                  
                                      G  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_1751   274  GGGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  315
J  97.5% (39/40)    IGHJ4*02     9    --............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_305715

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-19*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              75.7    5e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCG	GCAGTGGCTGGTAC	GGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCGGCAGTGGCTGGTACGGGATTGACTAC	AKDRGSGWYGIDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_1752   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGCTGGATCCGGCAGACCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   .............................................T.......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_1752   91   TGGATTGGGTATATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ....................C...................................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  D  R  G  S  G  W  Y  G  I 
                    Query_1752   181  CAGTTCTCCCTGAGGCTGAACTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAAAGATCGCGGCAGTGGCTGGTACGGGATT  270
V  96.7% (237/245)  IGHV4-59*01  229  .............A.....G...........................G.............G...-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (14/14)   IGHD6-19*01  8    ----------------------------------------------------------------------..............------  21
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_1752   271  GACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  310
J  97.6% (41/42)    IGHJ4*02     9    ...................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_305714

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           332     3e-93
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGCCTG	ATGGTTCGGGGAGCTATT	TGGAGGGGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGCCTGATGGTTCGGGGAGCTATTTGGAGGGGTTACTTTGACTAC	ARLMVRGAIWRGYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	229	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  F  S  S  S  N  F  Y  W  G  W  I  R  Q  A  P  G  K  G 
                    Query_1753   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCTTCAGCAGTAGTAACTTCTACTGGGGCTGGATCCGCCAGGCCCCAGGGAAGGGA  90
V  93.1% (229/246)  IGHV4-39*01  49   ...................C................A............GT.A......................C.............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  W  Y  S  G  R  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1753   91   CTAGAGTGGATTGGGAATATCTGGTATAGTGGGAGGACTAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  93.1% (229/246)  IGHV4-39*01  139  ..G.............G.....AT...........C..CT........C.........................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  V  R  G  A  I 
                    Query_1753   181  AAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGCGCCTGATGGTTCGGGGAGCTATT  270
V  93.1% (229/246)  IGHV4-39*01  229  .....................C...............................G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  94.4% (17/18)    IGHD3-10*01  9    ------------------------------------------------------------------------.............T....  26

                                      GT------------------>                                  
                                       W  R  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1753   271  TGGAGGGGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (46/46)   IGHJ4*02     3    ---------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_305717

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           420     7e-120
IGHD5-12*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTCAATTTGGTTCCGCAAA	TGGCTAC	CGG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTCAATTTGGTTCCGCAAATGGCTACCGGTACGGCATGGACGTC	ARFQFGSANGYRYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  P  H  Y
                    Query_1754   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTAAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTCCCCACTA  90
V  96.5% (279/289)  IGHV5-51*03  6    ................................................G.................................A..AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  C  S  P
                    Query_1754   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATAATCTATCCTGCTGACTCTGATACCAGATGCAGCCC  180
V  96.5% (279/289)  IGHV5-51*03  96   ......................................................C..........G.................A......  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  R  R  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1754   181  GTCCTTCCAACGCCGGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.5% (279/289)  IGHV5-51*03  186  ..........G...A.............................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  F  Q  F  G  S  A  N  G  Y  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  I
                    Query_1754   271  CATGTATTACTGTGCGAGATTTCAATTTGGTTCCGCAAATGGCTACCGGTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCAT  360
V  96.5% (279/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD5-12*01  11   ---------------------------------------.......--------------------------------------------  17
J  95.8% (46/48)    IGHJ6*02     15   -------------------------------------------------.....T.................................G.  55

                                             
                                        S  S 
                    Query_1754   361  CTCCTCA  367
J  95.8% (46/48)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_282843

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            315     5e-88
IGHD5-12*01                                                                                           12.2    30   
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GATATA	CTCTAGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGATATACTCTAGGACAC	ARGYTLGH	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	225	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  V  S  G  L  P  F  D  T  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1755   1    GGTCCCTGAGACTCTCCTGTGTAGTCTCTGGATTGCCCTTTGATACTTATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (225/249)  IGHV3-7*03   47   .....................C..C.........CA.....AG..GC..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  Q  E  N  Y  V  D  S  V  G  G  R  F  T  I  S  R  D  N  T  
                    Query_1755   91   AGTGGGTGGCCAACATAAAGGAAGATGGGAGTCAGGAAAATTATGTGGACTCTGTGGGGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  90.4% (225/249)  IGHV3-7*03   137  ....................C.......A...G..A..T.C...............AA............................G...  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  Y  T  L  G  H  W  
                    Query_1755   181  AGAATTCATTGTATCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCCGTATATTACTGTGCGCGAGGATATACTCTAGGACACTGGG  270
V  90.4% (225/249)  IGHV3-7*03   227  ....C...C...........................C...G...........G............A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD5-12*01  4    ---------------------------------------------------------------------......---------------  9
J  94.4% (34/36)    IGHJ4*02     13   ------------------------------------------------------------------------------------......  18

                                                                    
                                      G  P  G  T  L  V  S  V  S  S  
                    Query_1755   271  GCCCGGGAACCCTGGTCTCCGTCTCCTCAG  300
J  94.4% (34/36)    IGHJ4*02     19   ...A.............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_282842

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           333     1e-93
IGHD3-16*01                                                                                           12.2    32   
IGHJ2*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGGCG	TGGGGG	GATCAAGGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGGCGTGGGGGGATCAAGGGATCCTGGTACTCCGATCTC	ARVRRGGIKGSWYSDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1756   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGACATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-48*03  47   ..............................................TT..........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  T  G  S  T  L  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1756   91   AGTGGGTTTCACACATCAGTACTGGTAGTACTCTAATAAACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  92.8% (231/249)  IGHV3-48*03  137  ...........T....T....G.A..G...G.ACC...T..................................................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  V  R  R  G  G  I  K  
                    Query_1756   181  AGAATTCACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTATCTATTACTGTGCGAGAGTCCGGCGTGGGGGGATCAAGG  270
V  92.8% (231/249)  IGHV3-48*03  227  ....C.......................C.....................G.T................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------------......--------  22

                                      T------------------>                                  
                                      G  S  W  Y  S  D  L  W  G  R  G  T  L  V  I  V  S  S  
                    Query_1756   271  GATCCTGGTACTCCGATCTCTGGGGCCGTGGCACCCTGGTCATTGTCTCCTCAG  324
J  96.0% (48/50)    IGHJ2*01     4    ----........T.............................C...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_282841

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           375     3e-106
IGHD3-3*01                                                                                            23.8    0.011 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACCGCCCCGCGAG	TTTTTGGAGTGG	GGCAGACCCT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACCGCCCCGCGAGTTTTTGGAGTGGGGCAGACCCTTACGGTATGGACGTC	ARYRPASFWSGADPYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	244	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  N  L  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1757   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAACTTGAACTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  98.4% (244/248)  IGHV3-21*01  47   ...................................................G.A...............................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1757   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAGTCACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (244/248)  IGHV3-21*01  137  ................................T.........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Y  R  P  A  S  F  W  
                    Query_1757   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGATACCGCCCCGCGAGTTTTTGGA  270
V  98.4% (244/248)  IGHV3-21*01  227  ....................................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD3-3*01   10   ----------------------------------------------------------------------------------........  17

                                      -IMGT----------------------->                                 
                                      S  G  A  D  P  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1757   271  GTGGGGCAGACCCTTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (12/12)   IGHD3-3*01   18   ....----------------------------------------------------------  21
J  100.0% (48/48)   IGHJ6*02     15   --------------................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_282840

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGGA	N/A	N/A	TCCCC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGATCCCCCTATTACGGTATGGACGTC	AGSPYYGMDV	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1758   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTACTGGATGCACTGGGTCCGCCAAGCTCCCGGGAAGGGGCTGG  90
V  96.4% (239/248)  IGHV3-74*01  47   ..............................................C.............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  F  S  D  V  T  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1758   91   TGTGGGTCTCACGTATTTTTAGTGATGTGACTAGCACAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (239/248)  IGHV3-74*01  137  .................AA........G..G...........................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  G  S  P  Y  Y  G  M  D  
                    Query_1758   181  GGAACACCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAGGATCCCCCTATTACGGTATGGACG  270
V  96.4% (239/248)  IGHV3-74*01  227  A......G.........................................................A..----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  96.2% (50/52)    IGHJ6*02     11   -------------------------------------------------------------------------...C.............  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_1758   271  TCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  305
J  96.2% (50/52)    IGHJ6*02     28   ........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_282847

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           319     2e-89
IGHD3-16*01                                                                                           18.0    0.61 
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	N/A	TTTGGGGTAGTT	TG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTTGGGGTAGTTTGGATGCCTTCGATATC	AKVWGSLDAFDI	264	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	149	45	23	1	21	51.1
FR3-IMGT	150	263	114	112	2	0	98.2
CDR3-IMGT (germline)	264	270	7	7	0	0	100
Total	N/A	N/A	270	239	10	21	88.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1759   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATGTTCAGTAGCTATGCCATGAACTGGGTCCGCCAGGCGCCAGGGAAGGGGCTGG  90
V  88.5% (239/270)  IGHV3-30*18  47   ....................................CC.............G....C................T.....C..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----------------CDR2-IMGT-----------------><------------------------------
                                      E  W  V  A  I  I  S  F  E  G  S  K  K  S  Y  D  G  S  N  E  Y  Y  A  D  S  V  K  G  R  F  
                    Query_1759   91   AGTGGGTGGCAATTATTTCATTTGAAGGAAGTAAGAAATCATATGATGGAAGTAATGAATACTATGCAGACTCCGTGAAGGGCCGATTCA  180
V  88.5% (239/270)  IGHV3-30*18  137  ...........G....---------------------...................A.................................  205
                                      E  W  V  A  V  I                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  S  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  
                    Query_1759   181  CCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAGCAGCCTGAGAGTTGAGGACACGGCTGTGTATTACTGTGCGAAAG  270
V  88.5% (239/270)  IGHV3-30*18  206  .............................................A...........C................................  295
                                      T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  

                                      -------CDR3-IMGT------------>                                  
                                      V  W  G  S  L  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1759   271  TTTGGGGTAGTTTGGATGCCTTCGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  333
D  91.7% (11/12)    IGHD3-16*01  15   .......G....---------------------------------------------------  26
J  95.9% (47/49)    IGHJ3*02     2    --------------.....T..T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_282846

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           338     5e-95
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GGG	CTATGCTTCGGGGAGTCATT	TCAAATCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGGGCTATGCTTCGGGGAGTCATTTCAAATCTCACTTTGACTAC	AKEGYASGSHFKSHFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  T  P  G  Q  G  L  
                    Query_1760   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAGTTATGGCATGCACTGGGTCCGCCAGACTCCAGGCCAGGGACTGG  90
V  93.2% (233/250)  IGHV3-30*18  47   ...........................................T..C........................G........A....G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  V  S  S  D  G  S  V  Q  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1760   91   AGTGGCTGGCAGTTGTATCAAGTGATGGAAGTGTTCAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCC  180
V  93.2% (233/250)  IGHV3-30*18  137  .....G........A.....TA..........AA.A.....................................................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      Q  N  T  L  Y  L  Q  M  N  S  L  R  S  E  D  T  A  V  Y  Y  C  A  K  E  G  Y  A  S  G  S  
                    Query_1760   181  AGAACACGCTGTATCTGCAAATGAATAGCCTGAGATCTGAGGATACGGCTGTTTATTACTGTGCGAAAGAGGGCTATGCTTCGGGGAGTC  270
V  93.2% (233/250)  IGHV3-30*18  227  .........................C.........G.......C........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (18/20)    IGHD3-10*01  7    -------------------------------------------------------------------------.....G..........T  23

                                      GT-------------------->                                  
                                      H  F  K  S  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1760   271  ATTTCAAATCTCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  90.0% (18/20)    IGHD3-10*01  24   ...------------------------------------------------------  26
J  100.0% (45/45)   IGHJ4*02     4    ------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_282845

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           349     2e-98
IGHD4-17*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CCCCCGA	TGACGACGGTGACTAC	CGCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCCCCCGATGACGACGGTGACTACCGCCCTTTTGACAAC	AKAPDDDGDYRPFDN	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1761   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGGAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-23*01  47   ...........................................C..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  D  I  S  D  N  A  A  H  T  Y  Y  A  E  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_1761   91   AGTGGGTCTCAGATATTAGTGATAATGCTGCTCATACATACTACGCAGAGTCCGTGAGGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (236/249)  IGHV3-23*01  137  ............C........G..G..G..G.AGC..............C.......A................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  A  P  D  D  D  G  D  
                    Query_1761   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATACTACTGTGCGAAAGCCCCCGATGACGACGGTGACT  270
V  94.8% (236/249)  IGHV3-23*01  227  ..................................................G....T.............---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD4-17*01  1    ----------------------------------------------------------------------------....T.........  14

                                      ---------------->                                  
                                      Y  R  P  F  D  N  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_1761   271  ACCGCCCTTTTGACAACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  321
D  93.8% (15/16)    IGHD4-17*01  15   ..-------------------------------------------------  16
J  95.3% (41/43)    IGHJ4*02     6    --------......T..................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_282844

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           339     2e-95
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TGTCTCCA	GACTACGGTGAC	GCT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTGTCTCCAGACTACGGTGACGCTTTTCACGAC	AKVSPDYGDAFHD	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1762   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTACCTTTAGCAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  93.6% (233/249)  IGHV3-23*01  47   ..................................C...........C......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  L  S  G  R  G  G  S  S  Y  Y  A  D  S  V  K  G  R  C  T  I  S  R  D  N  S  
                    Query_1762   91   AGTGGGTCTCACATTTGAGTGGTCGTGGTGGCAGTTCATACTACGCAGATTCCGTGAAGGGCCGGTGCACCATCTCCAGAGACAATTCCA  180
V  93.6% (233/249)  IGHV3-23*01  137  ...........GC.A.T......A.......T..CA.............C................T.......................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  K  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  V  S  P  D  Y  G  D  
                    Query_1762   181  AGAAGACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTTTATTACTGTGCGAAAGTGTCTCCAGACTACGGTGACG  270
V  93.6% (233/249)  IGHV3-23*01  227  ....C.............................................G.A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD4-17*01  2    -----------------------------------------------------------------------------............-  13

                                      ---------->                                  
                                      A  F  H  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1762   271  CTTTTCACGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  95.3% (41/43)    IGHJ4*02     6    --...G..T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_304040

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           372     2e-105
IGHD2-2*01                                                                                            23.8    0.011 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAG	TTGTAGTAGTAACACCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGTTGTAGTAGTAACACCTGCTACTACGAAATGGACGTC	ARVSCSSNTCYYEMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	241	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1763   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.8% (241/244)  IGHV4-59*01  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1763   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGGTAGACACGTCCAAGAAC  180
V  98.8% (241/244)  IGHV4-59*01  139  .......................................................................A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  C  S  S  N  T  C  Y 
                    Query_1763   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTAAGTTGTAGTAGTAACACCTGCTAC  270
V  98.8% (241/244)  IGHV4-59*01  229  ...............................................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (16/18)    IGHD2-2*01   7    --------------------------------------------------------------------...........C..G...----  24
J  96.2% (50/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1763   271  TACGAAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  96.2% (50/52)    IGHJ6*02     15   ....GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_304041

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD1-1*01                                                                                            14.1    7.9  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_1764   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_1764   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_1764   181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_1764   271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_304046

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         332     3e-93
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGTCAA	TACTATGCTATTAGTGCTTATT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGTCAATACTATGCTATTAGTGCTTATTACTACTTTGACCAC	ARGQYYAISAYYYFDH	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  D  V  S  G  G  S  I  S  S  G  G  Y  Y  W  N  W  I  R  Q  T  P  G  K  G 
                    Query_1765     1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAATTGGATTCGACAGACCCCAGGGAAGGGC  90
V  92.7% (230/248)  IGHV4-30-4*01  49   ..................AC.............................A...........G......C..C...C..............  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  S  V  Y  Y  S  G  R  T  Y  D  S  P  S  L  K  S  R  V  T  L  S  V  D  T  S 
                    Query_1765     91   CTGGAGTGGATTGGGTCCGTCTATTACAGTGGGCGCACCTATGACAGCCCGTCCCTCAAGAGTCGAGTTACCTTATCAGTCGACACGTCC  180
V  92.7% (230/248)  IGHV4-30-4*01  139  ................A.A..............A.......CT...A.........................A.......A.........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                         K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  Q  Y  Y  A  I  S 
                    Query_1765     181  AAGAACCAGTTCTCCCTGAGGTTGAGCTCTGTGACTGCCGCAGACACGGCCGTCTATTACTGTGCCAGGGGTCAATACTATGCTATTAGT  270
V  92.7% (230/248)  IGHV4-30-4*01  229  ...................A.C...............................G..............----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  86.4% (19/22)    IGHD3-22*01    5    ---------------------------------------------------------------------------.......A..G....  19

                                        GT------------------>                                  
                                         A  Y  Y  Y  F  D  H  W  G  R  G  I  L  V  T  V  T  S  
                    Query_1765     271  GCTTATTACTACTTTGACCACTGGGGCCGGGGAATCCTGGTCACCGTCACGTCAG  325
D  86.4% (19/22)    IGHD3-22*01    20   .G.....------------------------------------------------  26
J  89.6% (43/48)    IGHJ4*02       1    -------...........T.........A.....C.............T.C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_304047

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            319     2e-89
IGHD3-3*01                                                                                            12.2    31   
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGGACCTGGCAGGGGATTCTT	GATTTT	N/A	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATGGGACCTGGCAGGGGATTCTTGATTTT	ARDGTWQGILDF	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  L  V  S  G  F  S  L  S  D  Y  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1766  1    GGTCCCTGAGACTCTCCTGTCTAGTCTCTGGATTCAGTTTGAGTGATTATTATATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-7*03  47   ....................GC..C...........CC..T...AGC....GG....G................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  N  R  D  G  S  G  R  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1766  91   AGTGGGTGGCCAACATAAACCGAGATGGAAGTGGGAGATACTATGTGGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  90.8% (227/250)  IGHV3-7*03  137  ...................G.A...........A..A...........................A.........................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                     K  N  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  G  T  W  Q  G  I  
                    Query_1766  181  AGAACTCACTGTTTCTGCAAATGAACAGCCTCAGAGTCGAAGATACGGCCGTGTATTACTGTGCGCGAGATGGGACCTGGCAGGGGATTC  270
V  90.8% (227/250)  IGHV3-7*03  227  ............A..................G....C...G..C.....................A....--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                     ------->                                  
                                     L  D  F  W  G  Q  G  A  L  V  S  V  S  S  
                    Query_1766  271  TTGATTTTTGGGGCCAGGGAGCCCTGGTCAGCGTCTCCTCAG  312
D  100.0% (6/6)     IGHD3-3*01  8    --......----------------------------------  13
J  94.1% (32/34)    IGHJ4*02    15   --------............A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_348038

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GGGCATCAGTGC	CTATGGTTCGGGGAG	CGC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGGGCATCAGTGCCTATGGTTCGGGGAGCGCTATGGACGTC	VKGISAYGSGSAMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1767   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCCATGCCATGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (230/247)  IGHV3-23*01  47   ...........................................C...T...................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  N  G  G  T  T  H  Y  A  D  S  V  Q  G  R  S  I  I  S  R  D  N  S  
                    Query_1767   91   AGTGGGTCTCAGTTATTAGTGGCAATGGTGGTACCACACATTACGCAGACTCCGTGCAGGGCCGGTCCATCATCTCCAGAGACAATTCCA  180
V  93.1% (230/247)  IGHV3-23*01  137  ............C.........T.G........G....T.C...............A.........T..C....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  T  L  R  A  G  D  T  A  V  Y  Y  C  V  K  G  I  S  A  Y  G  S  
                    Query_1767   181  AGAACACCTTGTATCTGCAAATGAACACCCTGAGAGCCGGGGACACGGCCGTATATTACTGTGTGAAGGGCATCAGTGCCTATGGTTCGG  270
V  93.1% (230/247)  IGHV3-23*01  227  .......GC..................G...........A.......................C...-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (15/15)   IGHD3-10*01  7    -------------------------------------------------------------------------------...........  17

                                      ---------------->                                 
                                      G  S  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1767   271  GGAGCGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
D  100.0% (15/15)   IGHD3-10*01  18   ....----------------------------------------------  21
J  100.0% (43/43)   IGHJ6*02     20   -------...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_348032

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           339     1e-95
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	N/A	AGCGAGGGCCTGCCTGGCACAC	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCGAGGGCCTGCCTGGCACACTGCTTTTGATATC	AKRGPAWHTAFDI	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	229	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1768   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTCGTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.0% (229/241)  IGHV4-59*08  49   ...........................................G..AC.......G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  N  S  G  N  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1768   91   TGGATTGGGTATATCTTTAACAGTGGGAACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.0% (229/241)  IGHV4-59*08  139  ................A.T.........G.......................A.....................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  R  G  P  A  W  H  T  A  F 
                    Query_1768   181  CAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTATATTATTGTGCGAAGCGAGGGCCTGCCTGGCACACTGCTTTT  270
V  95.0% (229/241)  IGHV4-59*08  229  ..............G....G...........................G.....C.......-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
J  97.9% (46/47)    IGHJ3*02     4    -----------------------------------------------------------------------------------.......  10

                                      ----->                                  
                                       D  I  W  G  Q  G  T  I  V  T  V  S  S  
                    Query_1768   271  GATATCTGGGGCCAAGGGACAATAGTCACCGTCTCTTCAG  310
J  97.9% (46/47)    IGHJ3*02     11   .......................G................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_348031

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           338     5e-95
IGHD2-15*01                                                                                           10.3    121  
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	T	GCTGC	GCTGTACGAAGAGG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGCTGCGCTGTACGAAGAGGACAACTGGTTCGACCCC	AKDAALYEEDNWFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  N  N  Y  G  M  H  W  V  R  Q  T  P  G  K  G  L  
                    Query_1769   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAATAACTATGGCATGCACTGGGTCCGCCAGACTCCAGGCAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-30*18  47   ....................................C.....G..G.........................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  R  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_1769   91   AGTGGGTGGCAGTTATCTCATATGATGGAAGGAAGAAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCG  180
V  93.2% (233/250)  IGHV3-30*18  137  ................A..............T..T.....C...........................................A....A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  T  V  N  L  E  M  N  S  L  R  I  E  D  T  A  V  Y  Y  C  A  K  D  A  A  L  Y  E  E  
                    Query_1769   181  AGAACACGGTGAATCTGGAAATGAATAGCCTGAGAATTGAGGACACGGCTGTTTATTACTGTGCGAAAGATGCTGCGCTGTACGAAGAGG  270
V  93.2% (233/250)  IGHV3-30*18  227  ........C..T.....C.......C.........GC...............G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD2-15*01  21   -----------------------------------------------------------------------.....--------------  25

                                      ---------------->                                
                                      D  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1769   271  ACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
J  100.0% (49/49)   IGHJ5*02     1    .................................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_348030

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTC	ARHGDDSGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	283	8	0	97.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_1770   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCACCTA  90
V  97.3% (283/291)  IGHV5-51*01  6    ..............................A...................A...................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  T  R  Y  S  P
                    Query_1770   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  97.3% (283/291)  IGHV5-51*01  96   ........G.................................................T...............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1770   181  GTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.3% (283/291)  IGHV5-51*01  186  .......C...................A.C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  D  S  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_1770   271  CATGTATTACTGTGCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  97.3% (283/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------........A.....-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------.......AC.....T.............................  49

                                                   
                                        T  V  S  S 
                    Query_1770   361  CACCGTCTCCTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_348037

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            310     1e-86
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCTA	TATTACTATGAAAGTAGTGGTT	CAT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCTATATTACTATGAAAGTAGTGGTTCATACTTCTTTGACTAC	ARSLYYYESSGSYFFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	56	27	20	7	0	74.1
FR2-IMGT	57	107	51	48	3	0	94.1
CDR2-IMGT	108	128	21	18	3	0	85.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	223	25	0	89.9


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  D  S  I  S  N  S  R  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_1771   1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTGGTGACTCCATCAGTAATTCTAGGTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGAC  90
V  89.9% (223/248)  IGHV4-4*02   47   ..A.....TCC...A..................G.........C.G.AG..AC...................................G.  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  D  V  H  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  K  S  
                    Query_1771   91   TGGAGTGGATTGGAGACGTCCATCATAGTGGGACCACCAACTACAATCCGTCCCTCAAGAGTCGAGTCACCCTCTCAGTAGACAAGTCCA  180
V  89.9% (223/248)  IGHV4-4*02   137  .............G..AA..T............G............C........................A.A................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  K  R  F  S  L  K  L  T  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  Y  E  S  
                    Query_1771   181  AGAAGCGGTTCTCCCTGAAGCTGACCTCTGCGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAAGCCTATATTACTATGAAAGTA  270
V  89.9% (223/248)  IGHV4-4*02   227  ....C.A.................G.....T.....................................----------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  95.5% (21/22)    IGHD3-22*01  2    --------------------------------------------------------------------------...........T....  17

                                      GT-------------------->                                  
                                      S  G  S  Y  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1771   271  GTGGTTCATACTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.5% (21/22)    IGHD3-22*01  18   ......---------------------------------------------------  23
J  97.9% (47/48)    IGHJ4*02     1    ---------...A............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_348036

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_1772   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAGT  93
V  93.4% (228/244)  IGHV4-59*01  50   .....TCC...A....C.............G........G....................................G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_1772   94   GGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  93.4% (228/244)  IGHV4-59*01  140  .......GT........T.......G................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G  
                    Query_1772   184  AGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGAC  273
V  93.4% (228/244)  IGHV4-59*01  230  ............A.....G.....................G.C.....................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  94.7% (18/19)    IGHD3-16*01  7    ----------------------------------------------------------------....T..............-------  25

                                      ->                                  
                                      H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1772   274  ACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  309
J  97.2% (35/36)    IGHJ4*02     13   ................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_348035

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           358     4e-101
IGHD2-21*01                                                                                           10.3    124   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GGTGA	AGACCCCGGAGGGCGCC	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGAAGACCCCGGAGGGCGCCTACTTCTCCTATTACGGGATGGACGTC	ARVKTPEGAYFSYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  T  L  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1773   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATACTCTGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (238/247)  IGHV3-21*01  47   ..............................................C....GCA....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  G  S  Y  I  Y  Y  A  D  S  V  N  G  R  F  T  I  S  R  D  N  A  
                    Query_1773   91   AGTGGGTCTCATCCATTAGTAGTAGTGGGAGTTACATATACTACGCAGACTCAGTGAACGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (238/247)  IGHV3-21*01  137  ..........................A.T.............................G...............................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  K  T  P  E  G  A  
                    Query_1773   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTTTATTACTGTGCGAGGGTGAAGACCCCGGAGGGCGCCT  270
V  96.4% (238/247)  IGHV3-21*01  227  ........................................G...........G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  14   -------------------------------------------------------------------.....------------------  18
J  91.7% (55/60)    IGHJ6*02     3    -----------------------------------------------------------------------------------------.  3

                                      IMGT--------------------->                                 
                                      Y  F  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1773   271  ACTTCTCCTATTACGGGATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTCCTCA  329
J  91.7% (55/60)    IGHJ6*02     4    ...A..A...C.....T.................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_348034

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           302     3e-84
IGHD2-15*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GTCGGGAAGAAC	AGTGGTG	TCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTCGGGAAGAACAGTGGTGTCTTTTGACTTA	AKSGRTVVSFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	220	27	0	89.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  T  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1774   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCAACTTTAGCACGTATGCCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.1% (220/247)  IGHV3-23*01  47   ......................A.............C........GC..........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  N  S  T  K  Y  A  D  S  V  K  G  R  I  T  I  S  R  D  N  S  
                    Query_1774   91   AGTGGGTCTCAGCCATCAGTGGCAGTGGTAATAGCACAAAATATGCAGACTCCGTTAAGGGCCGGATCACCATCTCCAGAGACAATTCCA  180
V  89.1% (220/247)  IGHV3-23*01  137  .............T..T.....T......GG.......T.C..C...........G.........T........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  R  M  I  Y  L  Q  M  N  S  M  R  A  E  D  T  A  V  Y  L  C  A  K  S  G  R  T  V  V  S  
                    Query_1774   181  AGAGAATGATATATCTTCAAATGAACAGTATGAGAGCCGAGGACACGGCCGTATATCTTTGTGCGAAGTCGGGAAGAACAGTGGTGTCTT  270
V  89.1% (220/247)  IGHV3-23*01  227  ...AC.C.C.G.....G...........CC..........................TAC........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-15*01  11   -------------------------------------------------------------------------------.......----  17
J  88.4% (38/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                  
                                      F  D  L  R  G  Q  G  I  Q  V  T  V  S  S  
                    Query_1774   271  TTGACTTACGGGGCCAGGGAATCCAGGTCACCGTCTCCTCAG  312
J  88.4% (38/43)    IGHJ4*02     7    ......ACT............C..T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_53763

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_1775   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_1775   91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_1775   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_1775   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_53762

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*03                                                                                           254     9e-70
IGHD1-26*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGTTCCAGG	GTGGGAG	GTTCTCGGGGACTA	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGTTCCAGGGTGGGAGGTTCTCGGGGACTAGACTCC	AGSRVGGSRGLDS	227	265	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	18	6	0	75
FR2-IMGT	41	91	51	45	6	0	88.2
CDR2-IMGT	92	112	21	17	4	0	81
FR3-IMGT	113	226	114	103	11	0	90.4
CDR3-IMGT (germline)	227	229	3	3	0	0	100
Total	N/A	N/A	216	189	27	0	87.5


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-----CDR2-I
                                       S  G  G  S  I  T  D  F  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  Y  I  G  Y  I  Y  Y  T 
                    Query_1776   14   TCTGGAGGCTCCATCACTGACTTCTACTGGACCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAATACATTGGCTATATCTATTACACT  103
V  87.5% (189/216)  IGHV4-59*03  73   .....T..........G.AGT.A........G..................A..............G.GG.....G.............G.  162
                                       S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S 

                                      MGT-----><----------------------------------------------------FR3-IMGT--------------------
                                       G  D  T  N  Y  N  P  S  L  R  G  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  N  S 
                    Query_1776   104  GGCGACACCAACTACAATCCCTCCCTCAGGGGTCGAGTCACCATATCCGTGGACACGTCGAAGAACCAATTCTCCCTGAAACTTAACTCT  193
V  87.5% (189/216)  IGHV4-59*03  163  ..GAG............C..........A.A................A..A........C....................G..G.G....  252
                                       G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S 

                                      --------------------------------><--------------CDR3-IMGT-------------->                  
                                       V  T  A  A  D  T  A  A  Y  Y  C  A  G  S  R  V  G  G  S  R  G  L  D  S  W  G  Q  G  I  L 
                    Query_1776   194  GTGACCGCTGCGGACACGGCCGCTTATTACTGTGCGGGTTCCAGGGTGGGAGGTTCTCGGGGACTAGACTCCTGGGGCCAGGGAATCCTG  283
V  87.5% (189/216)  IGHV4-59*03  253  ......................TG............------------------------------------------------------  288
                                       V  T  A  A  D  T  A  V  Y  Y  C  A                                                       
D  100.0% (7/7)     IGHD1-26*01  7    ---------------------------------------------.......--------------------------------------  13
J  92.5% (37/40)    IGHJ4*02     9    ------------------------------------------------------------------....A..............C....  32

                                                      
                                       V  T  I  S  S  
                    Query_1776   284  GTCACCATCTCCTCAG  299
J  92.5% (37/40)    IGHJ4*02     33   ......G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_53767

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           333     1e-93
IGHD3-10*02                                                                                           16.1    2.3  
IGHJ6*02                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTT	TGTTCGGG	ACGTTGGTCGTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTTGTTCGGGACGTTGGTCGTGACTACTACTACGGTATGGACGTC	ARFVRDVGRDYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1777   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAAATATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (230/247)  IGHV3-21*01  47   .............................................GC....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  G  S  Y  I  Y  D  A  D  A  V  Q  G  R  F  A  I  S  R  D  N  A  
                    Query_1777   91   AGTGGGTCTCATCCATTAGTAGTAGTGGCAGTTACATATATGACGCAGACGCAGTGCAGGGCCGGTTCGCCATCTCTAGAGACAACGCCA  180
V  93.1% (230/247)  IGHV3-21*01  137  ..........................A.T...........CT........T.....A.......A...A.......C.............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  S  S  L  Y  L  Q  M  D  N  L  R  A  E  D  T  A  I  Y  Y  C  A  R  F  V  R  D  V  G  R  
                    Query_1777   181  AGAGCTCACTGTATCTGCAAATGGACAACCTGAGAGCCGAGGACACGGCTATATATTACTGTGCGAGGTTTGTTCGGGACGTTGGTCGTG  270
V  93.1% (230/247)  IGHV3-21*01  227  ...A...................A...G......................G.G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD3-10*02  10   ----------------------------------------------------------------------........------------  17

                                      GT-------------------->                                 
                                      D  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1777   271  ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  326
J  98.2% (55/56)    IGHJ6*02     7    ....................................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_53766

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  L  R  Q  A  P  G  K  G  P  
                    Query_1778   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGCTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...G........................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_1778   91   AGTGGGTCTCAGCGATTACTGGGAGTGGTAGTAGCACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  .............T....G...T......G..............G......................................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_1778   181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  93.6% (234/250)  IGHV3-23*01  227  ...............................G....................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1778   271  ATTCACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_53765

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           352     3e-99
IGHD3-10*01                                                                                           16.1    2.1  
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	TCGGAGA	TCGGGGAG	N/A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCATCGGAGATCGGGGAGGATGCTTTTGATATC	ASEIGEDAFDI	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	235	10	0	95.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  T  L  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1779   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAGTCACCCTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  95.9% (235/245)  IGHV3-74*01  47   ................................T.....T...................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  R  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1779   91   TGTGGGTCTCACGCATTAACAGTGATGGGAGTAGAATAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.9% (235/245)  IGHV3-74*01  137  .............T.....T..............C.C..G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  E  I  G  E  D  A  F  
                    Query_1779   181  AGAACACGCTGTATCTTCAAATGAACAGTCTGAGAGTCGAAGACACGGCTGTGTATTACTGTGCATCGGAGATCGGGGAGGATGCTTTTG  270
V  95.9% (235/245)  IGHV3-74*01  227  ................G...................C...G........................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD3-10*01  14   ------------------------------------------------------------------------........----------  21
J  98.0% (48/49)    IGHJ3*02     2    --------------------------------------------------------------------------------..........  11

                                      ---->                                  
                                      D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1779   271  ATATCTGGGGCCAAGGGACAATGGTCACCGTCTCATCAG  309
J  98.0% (48/49)    IGHJ3*02     12   ..................................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_53764

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           433     1e-123
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  E  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_1780   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGGAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  97.9% (283/289)  IGHV5-51*01  6    .................................................A...........................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_1780   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  97.9% (283/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1780   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (283/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1780   271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  97.9% (283/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_1780   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_53769

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         327     9e-92
IGHD3-9*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTGCAGATCACC	ATATTTTGACTGGTTA	CTTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCTGCAGATCACCATATTTTGACTGGTTACTTTACTAC	ASCRSPYFDWLLYY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	228	19	0	92.3


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  S  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1781     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCCTTCAGCAGCTCTGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGG  90
V  92.3% (228/247)  IGHV3-30-3*01  47   ...................................A.......T....A....................................G....  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  I  I  S  H  D  G  N  E  K  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_1781     91   AGTGGGTGGCAATCATTTCACATGATGGAAACGAAAAGTACTACGCAGATTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.3% (228/247)  IGHV3-30-3*01  137  ...........G.T..A...T.........G.A.T..A...........C.......A................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                        N  N  T  L  Y  V  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  S  C  R  S  P  Y  F  D  
                    Query_1781     181  ACAATACGCTGTATGTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTACTTCTGTGCGAGCTGCAGATCACCATATTTTGACT  270
V  92.3% (228/247)  IGHV3-30-3*01  227  .G..C.........C........................................T.A.........-----------------------  293
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (16/16)   IGHD3-9*01     9    -------------------------------------------------------------------------------...........  19

                                        ------------->                                  
                                        W  L  L  Y  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_1781     271  GGTTACTTTACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
D  100.0% (16/16)   IGHD3-9*01     20   .....-------------------------------------------  24
J  97.4% (38/39)    IGHJ4*02       10   ---------..................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_133224

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           360     1e-101
IGHD2-2*01                                                                                            12.2    37    
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAGCCACAATTAGTCCG	AGTAGT	TT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCCACAATTAGTCCGAGTAGTTTCTACTACGGTATGGACGGC	ARDLATISPSSFYYGMDG	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	260	30	0	89.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  T  V  S  C  K  S  S  G  Y  T  F  T  S  Y 
                    Query_1782   2    CAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGACGGTCTCCTGCAAGTCTTCTGGGTACACCTTTACCAGTTAC  91
V  89.7% (260/290)  IGHV1-18*04  7    ...................C.............................A.............G.......T..............C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  S  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  Y  Y  A  Q 
                    Query_1782   92   GGCAGCACCTGGGTGCGGCAGGCCCCTGGACAGGGCCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACATACTATGCACAG  181
V  89.7% (260/290)  IGHV1-18*04  97   ..T.T..G.........A..............A..G.............................C......A.....A...........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  D  R  D  K  V  T  M  T  R  N  T  S  T  S  T  V  H  M  E  V  R  G  L  T  S  D  D  T  A 
                    Query_1782   182  ATGGACCGCGACAAAGTCACCATGACCAGGAATACATCCACGAGCACAGTCCACATGGAGGTGAGGGGCCTGACATCTGACGACACGGCC  271
V  89.7% (260/290)  IGHV1-18*04  187  .A.CT..AG.G..G..............CAG.C................C.T........C.....A......G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  I  S  P  S  S  F  Y  Y  G  M  D  G  W  G  Q  G  T  T  V  T 
                    Query_1782   272  GTGTATTACTGTGCGAGAGATTTAGCCACAATTAGTCCGAGTAGTTTCTACTACGGTATGGACGGCTGGGGCCAAGGGACCACGGTCACC  361
V  89.7% (260/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD2-2*01   11   ---------------------------------------......---------------------------------------------  16
J  98.1% (51/52)    IGHJ6*02     11   -----------------------------------------------.................T.........................  53

                                               
                                       V  S  S 
                    Query_1782   362  GTCTCCTCA  370
J  98.1% (51/52)    IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_14780

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            299     3e-83
IGHD1-26*01                                                                                           12.2    33   
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	N/A	GGGAGC	CGACATAGCACAAATGGAGCATTGACAGGGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGGAGCCGACATAGCACAAATGGAGCATTGACAGGGAATGCTTTTCATATC	AGSRHSTNGALTGNAFHI	252	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	137	27	22	5	0	81.5
FR3-IMGT	138	251	114	100	14	0	87.7
CDR3-IMGT (germline)	252	254	3	3	0	0	100
Total	N/A	N/A	251	221	30	0	88


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  V  V  S  G  D  S  V  S  S  N  S  A  A  W  G  W  I  R  Q  S  P  S  R  G  
                    Query_1783   4    CCCTGAGACTCTCCTGTGTCGTCTCCGGGGACAGTGTCTCTAGCAACAGCGCTGCTTGGGGCTGGATCAGGCAGTCCCCATCGAGAGGCC  93
V  88.0% (221/251)  IGHV6-1*01   50   ....CTC....A......C.A............................T.........AA.............................  139
                                         L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R  Q  S  P  S  R  G  

                                      ----------------><--------CDR2-IMGT--------><---------------------------------------------
                                      L  E  W  L  A  R  T  Y  Y  T  S  Q  W  I  H  D  Y  E  D  S  V  K  S  R  I  N  V  N  A  D  
                    Query_1783   94   TTGAGTGGCTGGCTAGGACATACTACACGTCCCAGTGGATTCATGATTATGAAGATTCTGTGAAAAGTCGAATAAATGTCAACGCAGACA  183
V  88.0% (221/251)  IGHV6-1*01   140  ............GA.............G....A.....TA.A.........C..TA...................CCA.....C......  229
                                      L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R  I  T  I  N  P  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      T  S  K  N  Q  I  S  L  Q  L  T  S  V  T  P  E  D  T  A  M  H  F  C  A  G  S  R  H  S  T  
                    Query_1783   184  CATCCAAGAACCAGATCTCCCTGCAGTTGACCTCTGTGACTCCCGAGGACACGGCTATGCACTTCTGTGCAGGGAGCCGACATAGCACAA  273
V  88.0% (221/251)  IGHV6-1*01   230  ..............T...........C...A.........................G..T.T.A.......-------------------  300
                                      T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A                    
D  100.0% (6/6)     IGHD1-26*01  9    -----------------------------------------------------------------------......-------------  14

                                      -CDR3-IMGT--------------------->                                  
                                      N  G  A  L  T  G  N  A  F  H  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1783   274  ATGGAGCATTGACAGGGAATGCTTTTCATATCTGGGGCCAAGGGACAATGGTCACCGTGTCTTCAG  339
J  95.8% (46/48)    IGHJ3*02     3    ------------------........G...............................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_236597

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD1-26*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAG	TCACCTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTCACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSHLYYFYGMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	69	2	0	97.2
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	104	10	0	91.2
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	292	275	17	0	94.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  
                    Query_1784   7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACT  96
V  94.2% (275/292)  IGHV5-51*01  5    ..............................A...................................G....................G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  
                    Query_1784   97   ACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCC  186
V  94.2% (275/292)  IGHV5-51*01  95   .........G...........................C....................C...................C...........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  E  G  Q  V  T  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  G  G  W  K  A  S  D  P  
                    Query_1784   187  CGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCGTCAGTACCGCCTACCTACAGTGGGGCGGCTGGAAGGCCTCGGACCCCG  276
V  94.2% (275/292)  IGHV5-51*01  185  ........C................................A....C...........G......A..A..CT.............A...  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------------CDR3-IMGT----------------------->                   
                                      A  I  Y  Y  C  A  R  H  G  D  D  S  G  S  H  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  
                    Query_1784   277  CCATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTCACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGG  366
V  94.2% (275/292)  IGHV5-51*01  275  ....G.................--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (10/10)   IGHD1-26*01  4    ------------------------------..........--------------------------------------------------  13
J  98.2% (56/57)    IGHJ6*02     6    -----------------------------------------------.......A...................................  48

                                                    
                                      V  T  V  S  S 
                    Query_1784   367  TCACCGTCTCCTCA  380
J  98.2% (56/57)    IGHJ6*02     49   ..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_14782

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGACC	ARGDYDIGWT	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  L  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_1785   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCCTTACTCACTACTGGAGCTGGATTCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .......................................AG..G.T................C.................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  G  G  I  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_1785   91   TGGATTGGATATATCTATTACGGTGGGATCACCACTTATAACCCTTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ........G............A......G.....AC..C.....C..................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  T  W 
                    Query_1785   181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGACCTGG  270
V  91.4% (223/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (36/36)   IGHJ5*02     16   -------------------------------------------------------------------------------------.....  20

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_1785   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (36/36)   IGHJ5*02     21   ...............................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_14783

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_1786   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_1786   91   GAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ...................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_1786   181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1786   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_14784

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         347     8e-98
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAC	TACTATGATAGTAGTGGTT	CGTACTCCGAATC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACTACTATGATAGTAGTGGTTCGTACTCCGAATCTGATGCTTTTGATATC	ARHYYDSSGSYSESDAFDI	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	65	6	0	91.5
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	17	7	0	70.8
FR3-IMGT	177	290	114	102	12	0	89.5
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	290	256	34	0	88.3


Alignments

                                        <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                           Q  L  V  Q  S  G  G  G  V  V  Q  P  G  K  S  L  R  L  S  C  E  V  S  G  F  T  F  S  S  
                    Query_1787     7    TGCAGCTGGTGCAGTCTGGAGGAGGCGTGGTCCAGCCTGGGAAATCCCTGAGACTCTCCTGTGAAGTCTCTGGATTCACCTTCAGTTCTT  96
V  88.3% (256/290)  IGHV3-30-3*01  5    ...........G.......G......................GG...................C..C...................AGC.  94
                                           Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  

                                        ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                        F  G  F  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  S  F  D  G  D  N  R  L  Y  A  
                    Query_1787     97   TTGGTTTCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCTCTTATTTCTTTTGATGGAGACAACAGATTATACGCAG  186
V  88.3% (256/290)  IGHV3-30-3*01  95   A..C.A.G............................................AG....A..A.A.......AG...T.A..AC.......  184
                                        Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  

                                        -------------------------------------------FR3-IMGT---------------------------------------
                                        D  S  V  K  G  R  F  T  V  S  R  D  N  S  K  N  S  L  Y  L  Q  L  N  S  L  T  A  D  D  T  
                    Query_1787     187  ACTCCGTGAAGGGGCGATTCACCGTCTCGAGAGACAATTCCAAGAACTCGCTCTATCTACAACTGAACAGCCTGACAGCTGACGACACGG  276
V  88.3% (256/290)  IGHV3-30-3*01  185  .............C.........A....C..................A....G.....G...A............G......G.......  274
                                        D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  

                                        -------------><-----------------------CDR3-IMGT----------------------->                   
                                        A  V  Y  Y  C  A  R  H  Y  Y  D  S  S  G  S  Y  S  E  S  D  A  F  D  I  W  G  Q  G  T  L  
                    Query_1787     277  CTGTCTATTACTGTGCGAGACACTACTATGATAGTAGTGGTTCGTACTCCGAATCTGATGCTTTTGATATCTGGGGCCAGGGGACACTAG  366
V  88.3% (256/290)  IGHV3-30-3*01  275  ....G...............----------------------------------------------------------------------  294
                                        A  V  Y  Y  C  A  R                                                                       
D  100.0% (19/19)   IGHD3-22*01    5    -----------------------...................------------------------------------------------  23
J  93.8% (45/48)    IGHJ3*02       1    -------------------------------------------------------........................A......A.G.  35

                                                     
                                        V  T  V  S  S
                    Query_1787     367  TCACCGTCTCTTC  379
J  93.8% (45/48)    IGHJ3*02       36   .............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_14785

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            358     3e-101
IGHD3-10*01                                                                                           10.3    115   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GA	TCGGG	ATGGCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGATCGGGATGGCTCCCTGACTAC	VGGSGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  N  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1788   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGTAACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-7*01   47   ....................................C........G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  K  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1788   91   AGTGGGTGGCCAACATAAAGAAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (239/249)  IGHV3-7*01   137  ....................C.................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  V  G  G  S  G  W  L  P  D  
                    Query_1788   181  AGAACTCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGTGGGAGGATCGGGATGGCTCCCTGACT  270
V  96.0% (239/249)  IGHV3-7*01   227  ...................A...A............C..........................C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   -----------------------------------------------------------------------.....--------------  18
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1788   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_14786

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            367     5e-104
IGHJ4*02                                                                                              75.7    5e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	CTTTTAAGGGGCACGGAAGCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTTTAAGGGGCACGGAAGCAACTAC	ARAFKGHGSNY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1789  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-7*03  47   .............................................G............................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  Q  D  G  G  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1789  91   AGTGGGTGGCCAACATAAAGCAAGATGGAGGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (242/249)  IGHV3-7*03  137  .............................A............................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                     K  S  S  L  H  L  Q  M  S  G  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  F  K  G  H  G  S  
                    Query_1789  181  AGAGCTCACTGCATCTGCAAATGAGCGGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAGAGCTTTTAAGGGGCACGGAAGCA  270
V  97.2% (242/249)  IGHV3-7*03  227  ...A.......T............A.A.........................G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                     ---->                                  
                                     N  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1789  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (39/39)   IGHJ4*02    10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_14787

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           367     6e-104
IGHD6-13*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCGA	GGTATAGCA	ATAACTACTTAGAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCGAGGTATAGCAATAACTACTTAGATTTTGACTAC	AARYSNNYLDFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	240	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  M  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1790   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTATGTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (240/245)  IGHV3-48*03  47   .............................................GT...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  D  
                    Query_1790   91   AGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGACA  180
V  98.0% (240/245)  IGHV3-48*03  137  .......................................................................................C..  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  I  P  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  A  R  Y  S  N  N  Y  L  
                    Query_1790   181  AGATCCCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGGCGAGGTATAGCAATAACTACTTAG  270
V  98.0% (240/245)  IGHV3-48*03  227  ...A.T...........................................................-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD6-13*01  2    ---------------------------------------------------------------------.........------------  10

                                      ---------->                                  
                                      D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1790   271  ATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (43/43)   IGHJ4*02     6    --...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_14789

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69-2*01                                                                                         367     6e-104
IGHD1-1*01                                                                                            16.1    2.5   
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69-2*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GCATG	ACTGGAAC	CGGGGGAGAAGG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGCATGACTGGAACCGGGGGAGAAGGCAACTGGTTCGACCCC	ARGMTGTGGEGNWFDP	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	289	262	27	0	90.7


Alignments

                                        <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  I  S  C  K  V  S  G  Y  T  F  S  D  R 
                    Query_1791     2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCTTCAGTGAAAATCTCCTGCAAGGTTTCCGGGTACACCTTCAGCGACAGG  91
V  90.7% (262/289)  IGHV1-69-2*01  7    ........A........G........................A.........................T..A..........C....TAC  96
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  T  V  K  I  S  C  K  V  S  G  Y  T  F  T  D  Y 

                                        --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                         Y  V  H  W  V  K  Q  A  P  G  E  G  L  E  W  L  G  L  V  D  P  A  S  G  A  T  V  Y  A  E 
                    Query_1791     92   TACGTGCACTGGGTGAAACAGGCCCCTGGAGAAGGGCTTGAGTGGCTGGGACTTGTTGATCCTGCAAGTGGTGCAACAGTGTACGCAGAG  181
V  90.7% (262/289)  IGHV1-69-2*01  97   ...A...........C..............A..............A..................A.GA.....A....A.A.........  186
                                         Y  M  H  W  V  Q  Q  A  P  G  K  G  L  E  W  M  G  L  V  D  P  E  D  G  E  T  I  Y  A  E 

                                        -----------------------------------------FR3-IMGT-----------------------------------------
                                         K  F  Q  G  R  I  T  I  T  A  D  T  S  R  D  T  A  H  M  E  L  S  S  L  R  S  E  D  T  A 
                    Query_1791     182  AAGTTCCAGGGCAGAATCACCATAACCGCGGACACGTCTAGAGACACTGCCCACATGGAGTTGAGCAGCCTGAGATCTGAGGACACGGCC  271
V  90.7% (262/289)  IGHV1-69-2*01  187  ...............G........................C......A...T........C.............................  276
                                         K  F  Q  G  R  V  T  I  T  A  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                        -----------><-------------------CDR3-IMGT------------------>                              
                                         I  Y  Y  C  A  R  G  M  T  G  T  G  G  E  G  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S 
                    Query_1791     272  ATATATTACTGTGCAAGAGGCATGACTGGAACCGGGGGAGAAGGCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCC  361
V  90.7% (262/289)  IGHV1-69-2*01  277  G.G.............C..-----------------------------------------------------------------------  295
                                         V  Y  Y  C  A  T                                                                         
D  100.0% (8/8)     IGHD1-1*01     7    ------------------------........----------------------------------------------------------  14
J  100.0% (50/50)   IGHJ5*02       2    --------------------------------------------..............................................  47

                                            
                                         S  
                    Query_1791     362  TCAG  365
J  100.0% (50/50)   IGHJ5*02       48   ....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_236598

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_1792   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.8% (277/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_1792   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_1792   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1792   271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.8% (277/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_1792   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_236599

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD1-26*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGG	TAGTGGG	CAATACAGTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCT	ARGGSGQYSAYFGS	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  I  S  D
                    Query_1793   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCATCTGGATACAGCTTTATCAGTGA  90
V  93.1% (269/289)  IGHV5-51*01  6    .............................A....................A..............GT................C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  G  K  G  L  D  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  S  P
                    Query_1793   91   CTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGACTGGATGGGGGTCATTTATCCTGGTGACTCTGAAACCAGATATAGTCC  180
V  93.1% (269/289)  IGHV5-51*01  96   .......................T..................G.........A....C.................T........C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  T  S  L  K  A  S  D  T  A
                    Query_1793   181  GTCCTTCCAAGGCCAGGTCACCATTTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGACCAGCCTGAAGGCCTCGGACACCGC  270
V  93.1% (269/289)  IGHV5-51*01  186  ........................C...................G....................G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  F  C  A  R  G  G  S  G  Q  Y  S  A  Y  F  G  S  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_1793   271  CATATACTTCTGTGCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCTTGGGGCCAGGGAACCCTGGCCACCGTCTCCTCAG  359
V  93.1% (269/289)  IGHV5-51*01  276  ...G..T.A..........----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD1-26*01  5    ------------------------.......----------------------------------------------------------  11
J  91.5% (43/47)    IGHJ4*02     2    ------------------------------------------........A..AC...................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_244358

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           258     4e-71
IGHD5-18*01                                                                                           14.1    8.7  
IGHJ3*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GAATTTGGCGGG	ACAGCTTTGG	CCAGGC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGAATTTGGCGGGACAGCTTTGGCCAGGCTGATGCTTTTGATGTC	AKGIWRDSFGQADAFDV	248	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	48	3	0	94.1
CDR2-IMGT	101	133	33	21	3	9	63.6
FR3-IMGT	134	247	114	96	18	0	84.2
CDR3-IMGT (germline)	248	254	7	7	0	0	100
Total	N/A	N/A	241	205	27	9	85.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  I  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  L  I 
                    Query_1794   14   TGTGCAGCCTCTGGATTCATCTTTAGTAACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCACTTATT  103
V  85.1% (205/241)  IGHV3-23*01  64   ...................C......C.G...........G...........................................GC....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      ---------CDR2-IMGT-----------><----------------------------------------------------FR3-IMG
                                       S  G  S  G  A  R  G  R  S  T  Y  Y  A  S  S  V  K  G  R  F  T  I  S  R  D  N  S  K  K  M 
                    Query_1794   104  AGCGGAAGTGGTGCTAGAGGTCGTAGTACATATTATGCAAGCTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCAAGAAAATG  193
V  85.1% (205/241)  IGHV3-23*01  154  ..T..T.......---------....C.....C..C...GA....................................T........C.C.  234
                                       S  G  S  G           G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T 

                                      T----------------------------------------------------><--------------------CDR3-IMGT------
                                       M  F  L  D  M  G  S  L  R  V  E  D  T  A  I  Y  Y  C  A  K  G  I  W  R  D  S  F  G  Q  A 
                    Query_1794   194  ATGTTTTTGGATATGGGGAGCCTGAGAGTCGAGGACACGGCCATATATTATTGTGCGAAAGGAATTTGGCGGGACAGCTTTGGCCAGGCT  283
V  85.1% (205/241)  IGHV3-23*01  235  C...A.C..C.A...AAC..........C.............G.......C..........-----------------------------  295
                                       L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                               
D  90.0% (9/10)     IGHD5-18*01  7    -------------------------------------------------------------------------......A...-------  16
J  98.0% (49/50)    IGHJ3*01     1    -----------------------------------------------------------------------------------------.  1

                                      -------------->                                  
                                       D  A  F  D  V  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_1794   284  GATGCTTTTGATGTCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  332
J  98.0% (49/50)    IGHJ3*01     2    ..............................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_244355

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           338     5e-95
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAC	TGAGGCCCAATC	ACTATGAAAGTAGTGGT	CTCTAGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACTGAGGCCCAATCACTATGAAAGTAGTGGTCTCTAGCACTACTGTTTGGACGTC	ATLRPNHYESSGL*HYCLDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	230	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1795   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTAGTTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.3% (230/244)  IGHV4-59*08  49   ......................................C........C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  T  H  Y  S  G  S  A  K  Y  N  P  S  L  K  S  R  V  T  I  S  E  D  T  S  K  N 
                    Query_1795   91   TGGATTGGGAATACCCATTACAGTGGGAGCGCCAAATACAATCCCTCCCTTAAGAGTCGAGTCACCATATCAGAGGACACGTCCAAGAAC  180
V  94.3% (230/244)  IGHV4-59*08  139  .........T...T.T..............A....C.....C........C......................TA...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  V  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  T  L  R  P  N  H  Y  E  S  S 
                    Query_1795   181  CAGGTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGACACTGAGGCCCAATCACTATGAAAGTAGT  270
V  94.3% (230/244)  IGHV4-59*08  229  ...T................................................A........G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD3-22*01  6    ----------------------------------------------------------------------------.......T......  19

                                      GT------------------------>                                 
                                       G  L  *  H  Y  C  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1795   271  GGTCTCTAGCACTACTGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
D  94.1% (16/17)    IGHD3-22*01  20   ...---------------------------------------------------------  22
J  96.0% (48/50)    IGHJ6*02     13   ----------.....G..A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_244354

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         360     1e-101
IGHD3-10*01                                                                                           10.3    115   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GA	GGGGA	CAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAGGGGACATTATGGACGTC	ARGGDIMDV	244	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_1796     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  H  S  G  L  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  R  S 
                    Query_1796     91   CTGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACAGGTCC  180
V  96.0% (240/250)  IGHV4-30-2*01  139  ..............G......T...........AG..C.T...A......................G.......................  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                         K  N  Q  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  D  I  M  D  V 
                    Query_1796     181  AAGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAGGGGACATTATGGACGTC  270
V  96.0% (240/250)  IGHV4-30-2*01  229  ...........C.......A..................................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01    16   ------------------------------------------------------------------------.....-------------  20
J  100.0% (43/43)   IGHJ6*02       20   --------------------------------------------------------------------------------..........  29

                                                                         
                                         W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1796     271  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  303
J  100.0% (43/43)   IGHJ6*02       30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_244357

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD1-1*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AATTTGCGT	CTGGAGCGAC	GTTCTCAACCTTTTG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAATTTGCGTCTGGAGCGACGTTCTCAACCTTTTGACTTCTTTGACTCG	AKNLRLERRSQPFDFFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  F  A  V  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1797   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGGTTTGCCGTGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (233/248)  IGHV3-23*01  47   ..............................................C.A....A.............C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  T  I  S  G  S  G  D  S  T  Y  Y  I  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1797   91   AGTGGCTCTCAACTATTAGTGGTAGTGGTGACAGCACATACTACATTGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCC  180
V  94.0% (233/248)  IGHV3-23*01  137  .....G.....G..................GT............GCA..........................................A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      Q  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  N  L  R  L  E  R  R  
                    Query_1797   181  AGAATACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCCGTTTATTACTGTGCGAAAAATTTGCGTCTGGAGCGACGTT  270
V  94.0% (233/248)  IGHV3-23*01  227  ....C................................C..............A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (9/10)     IGHD1-1*01   8    -----------------------------------------------------------------------------.....A....---  17

                                      IMGT--------------------->                                  
                                      S  Q  P  F  D  F  F  D  S  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_1797   271  CTCAACCTTTTGACTTCTTTGACTCGTGGGGCCAGGGATCTCTGGTCACCGTCTCCTCAG  330
J  89.6% (43/48)    IGHJ4*02     1    ------------...A........AC............A.C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_244356

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           374     7e-106
IGHD3-3*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	242	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1798   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (242/245)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_1798   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.8% (242/245)  IGHV4-34*01  139  .........................................................................T................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_1798   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  98.8% (242/245)  IGHV4-34*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1798   271  GCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_244351

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           330     1e-92
IGHD3-10*01                                                                                           14.1    8.8  
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAAGAATTGAGGTGACGGCGCTTTCGGC	TTCGGGG	CTGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAAGAATTGAGGTGACGGCGCTTTCGGCTTCGGGGCTGATTTTTGACCGC	ARGRIEVTALSASGLIFDR	246	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  T  S  G  D  Y  F  W  N  W  I  R  Q  N  P  G  K  G  
                    Query_1799   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCACCAGTGGTGATTACTTCTGGAACTGGATCCGCCAGAACCCAGGGAAGGGCC  93
V  92.4% (230/249)  IGHV4-31*01  50   .....TCC...A....C......................G........G.....A.....G.............C...............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  S  N  S  G  N  T  Y  Y  N  P  S  L  K  S  L  V  T  M  S  V  D  T  S  
                    Query_1799   94   TGGAGTGGATTGGGTACATCTCTAACAGTGGGAACACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATGTCAGTGGACACGTCTA  183
V  92.4% (230/249)  IGHV4-31*01  140  .....................A.T.........G.......................................A.....A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  Q  F  S  L  K  L  R  S  M  T  A  A  N  T  A  V  Y  Y  C  A  R  G  R  I  E  V  T  A  
                    Query_1799   184  AGAACCAGTTCTCCCTGAAGCTGAGGTCTATGACTGCCGCGAACACGGCCGTGTATTATTGTGCGAGAGGAAGAATTGAGGTGACGGCGC  273
V  92.4% (230/249)  IGHV4-31*01  230  .........................C...G...........G................C..........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       

                                      -IMGT----------------------->                                  
                                      L  S  A  S  G  L  I  F  D  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1799   274  TTTCGGCTTCGGGGCTGATTTTTGACCGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  100.0% (7/7)     IGHD3-10*01  13   -------.......-------------------------------------------------  19
J  95.3% (41/43)    IGHJ4*02     6    --------------------......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_244350

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD2-15*01                                                                                           37.2    1e-06
IGHJ5*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCGATGGCGC	ATATTGTAGTGGTGGTAAGTGCTAC	GACGC	GTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCGATGGCGCATATTGTAGTGGTGGTAAGTGCTACGACGCGTTGGACTCC	AKVDGAYCSGGKCYDALDS	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  S  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  T  G  L  
                    Query_1800   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATCCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGACGGGGCTGG  90
V  94.4% (235/249)  IGHV3-23*01  47   .................................T...............................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  A  G  G  V  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1800   91   AGTGGGTCTCAGGTATCAGTGCTGGTGGTGTTGGCACATACTACGCAGACTCCGTTAAGGGCCGCTTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-23*01  137  ............C...T....G.A......G.A......................G........G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  V  D  G  A  Y  C  S  
                    Query_1800   181  AGAACACGCTATATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCCTTTATTACTGTGCGAAAGTCGATGGCGCATATTGTAGTG  270
V  94.4% (235/249)  IGHV3-23*01  227  ..........G............A..........................G.A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.0% (23/25)    IGHD2-15*01  4    -------------------------------------------------------------------------------...........  14

                                      -IMGT----------------------->                                  
                                      G  G  K  C  Y  D  A  L  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1800   271  GTGGTAAGTGCTACGACGCGTTGGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  333
D  92.0% (23/25)    IGHD2-15*01  15   ......GC......-------------------------------------------------  28
J  93.2% (41/44)    IGHJ5*01     8    -------------------...C..............A....................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_244353

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           343     2e-96
IGHD2-8*02                                                                                            12.2    30   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTGGGCCGTTGGCC	TACTGG	GTCT	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  T  N  H  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1801   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCGTCAGTACCAACCACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (233/247)  IGHV3-53*01  47   ...............................G.............G....T......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  I  I  F  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  K  
                    Query_1801   91   AGTGGGTCTCAATTATTTTTAGTGGTGGAAGTACATACTACGCAGACTCCGTGAAGGGCCGATTCTCCATCTCCAGAGACAATTCCAAAA  180
V  94.3% (233/247)  IGHV3-53*01  137  ...........G......A...C.....T..C.................................A......................G.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT---------------------------------------------------->                               
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  M  Y  Y  C  A  R  D  W  A  V  G  L  L  G  
                    Query_1801   181  ACACACTATATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATGTATTACTGTGCGAGAGATTGGGCCGTTGGCCTACTGGGTC  270
V  94.3% (233/247)  IGHV3-53*01  227  ....G..G.......................................G...................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (6/6)     IGHD2-8*02   10   ---------------------------------------------------------------------------------......---  15

                                                                       
                                      L  G  Q  G  T  L  V  T  V  S  S  
                    Query_1801   271  TGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (32/32)   IGHJ4*02     17   -................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_244352

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         386     1e-109
IGHD6-25*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CACGACCAAGACGATGCAA	CAGCGG	G	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACGACCAAGACGATGCAACAGCGGGTGACTAC	ARHDQDDATAGDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  R  I  S  C  Q  G  S  G  Y  S  F  A  M  H
                    Query_1802     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTCAGGGTTCTGGATACAGCTTTGCCATGCA  90
V  92.7% (268/289)  IGHV5-10-1*01  6    .............................A...............................A....................A...GCT.  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  R  D  S  Y  T  T  Y  S  P
                    Query_1802     91   CTGGATCACCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGCGGATTGATCCTCGTGACTCTTATACGACCTACAGCCC  180
V  92.7% (268/289)  IGHV5-10-1*01  96   ........G.............A.............................A...........A.............C.A.........  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  R  V  T  I  S  V  D  K  F  I  T  T  A  H  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1802     181  GTCCTTCCAAGGCCGCGTCACCATCTCAGTTGACAAGTTCATCACCACTGCCCATCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  92.7% (268/289)  IGHV5-10-1*01  186  ..............A..............C........C.....G.......T.C...........C.......................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          V  Y  Y  C  A  R  H  D  Q  D  D  A  T  A  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1802     271  CGTGTACTACTGTGCGAGACACGACCAAGACGATGCAACAGCGGGTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  92.7% (268/289)  IGHV5-10-1*01  276  .A....T............-------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD6-25*01    9    --------------------------------------......------------------------------------------  14
J  100.0% (41/41)   IGHJ4*02       8    ---------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_133001

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            355     3e-100
IGHD3-16*01                                                                                           18.0    0.54  
IGHJ4*02                                                                                              62.2    6e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	GGGT	CGTTTGGGG	CG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGGGGTCGTTTGGGGCGC	SRGRLGR	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1803   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (237/247)  IGHV3-7*03   47   .........................................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  N  Q  D  G  S  E  A  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1803   91   AGTGGGTGGCCATCATAAACCAAGATGGAAGTGAGGCATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  96.0% (237/247)  IGHV3-7*03   137  ............A......G...............AA..........................................A..........  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  S  R  G  R  L  G  R  W  G  
                    Query_1803   181  AGAACTCTCTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTGTATTACTGTTCGAGGGGTCGTTTGGGGCGCTGGGGCC  270
V  96.0% (237/247)  IGHV3-7*03   227  .......A.........C................................G...........G....-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD3-16*01  13   -----------------------------------------------------------------------.........----------  21
J  97.1% (34/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  T  L  V  T  V  S  T  
                    Query_1803   271  AGGGAACCCTGGTCACCGTCTCCACAG  297
J  97.1% (34/35)    IGHJ4*02     22   .......................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_133006

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           349     2e-98
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATGG	GGTTCGAGGA	CCCTCGACCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTTCGAGGACCCTCGACCGTTTTTGATATC	ARDGVRGPSTVFDI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	233	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  N  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1804   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTAACTCTTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (233/243)  IGHV4-59*08  49   ........................................G....T...AC.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_1804   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAATCCCTCCCTTAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  95.9% (233/243)  IGHV4-59*08  139  .........................................C........C.....................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  V  R  G  P  S  T  V 
                    Query_1804   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGATGGGGTTCGAGGACCCTCGACCGTT  270
V  95.9% (233/243)  IGHV4-59*08  229  ....................C........C.......................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD3-10*01  11   --------------------------------------------------------------------......G...------------  20
J  93.2% (41/44)    IGHJ3*02     7    -----------------------------------------------------------------------------------------.  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  T  I  I  V  S  S  
                    Query_1804   271  TTTGATATCTGGGGCCAAGGGACAACGATCATCGTCTCTTCAG  313
J  93.2% (41/44)    IGHJ3*02     8    .........................T.G...C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_133008

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           364     5e-103
IGHD3-3*01                                                                                            39.1    2e-07 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	T	TTACGATTTTTTGAGTGGTTATT	N/A	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATTTACGATTTTTTGAGTGGTTATTACTTC	AIYDFLSGYYF	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	237	4	0	98.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1805   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.3% (237/241)  IGHV4-34*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  V  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1805   91   TGGATTGGGGAAGTCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTGAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.3% (237/241)  IGHV4-34*01  139  ............A.....................................C.......................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  I  Y  D  F  L  S  G  Y  Y  F 
                    Query_1805   181  CAGTTCTCCCTGAAACTGAGCTCTCTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGATTTACGATTTTTTGAGTGGTTATTACTTC  270
V  98.3% (237/241)  IGHV4-34*01  229  ..............G.........G....................................-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.7% (22/23)    IGHD3-3*01   4    --------------------------------------------------------------...........G...........-----  26
J  97.4% (38/39)    IGHJ4*02     10   -------------------------------------------------------------------------------------...A.  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1805   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  97.4% (38/39)    IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_35327

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           378     3e-107
IGHD3-16*02                                                                                           12.2    33    
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTATCG	ACATTGGTTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTATTTGACTAT	ARHYRHWLFDY	267	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	27	3	0	90
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	152	21	18	3	0	85.7
FR3-IMGT	153	266	114	105	9	0	92.1
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	258	16	0	94.2


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  V  S  L  T  S  S  S  Y  Y  W  G  W  
                    Query_1806   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCCTCACCAGTAGTAGTTACTACTGGGGCTGGA  90
V  94.2% (258/274)  IGHV4-39*01  26   ................T.....................................G....A...G..........................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  G  R  
                    Query_1806   91   TCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTTTGTATTATAGTGGCAGCACCTACTACAACCCGTCCCTCAAGGGCCGAG  180
V  94.2% (258/274)  IGHV4-39*01  116  .........................................A.C...........G...........................A.T....  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  G  D  T  S  K  N  H  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  
                    Query_1806   181  TCACCATATCCGGGGACACGTCCAAGAACCACTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGA  270
V  94.2% (258/274)  IGHV4-39*01  206  ............TA.................G..C........G....G...T.....................................  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      --------CDR3-IMGT----------->                                  
                                      R  H  Y  R  H  W  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1806   271  GACATTATCGACATTGGTTATTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
V  94.2% (258/274)  IGHV4-39*01  296  ....-----------------------------------------------------------  299
                                      R                                                              
D  100.0% (6/6)     IGHD3-16*02  25   ----......-----------------------------------------------------  30
J  97.7% (42/43)    IGHJ4*02     6    --------------------........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_3008

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD2-21*01                                                                                           10.3    122   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TGTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTGTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFVQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_1807   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTTCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (240/248)  IGHV4-31*03  49   ...............................G..C......C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1807   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCT  180
V  96.8% (240/248)  IGHV4-31*03  139  ..................................G.............C......................C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  V  Q  E 
                    Query_1807   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTTCTCTATTTGTCCAAGAA  270
V  96.8% (240/248)  IGHV4-31*03  229  ..........................C.........................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD2-21*01  22   ---------------------------------------------------------------------------.....----------  26

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_1807   271  AGAGTCTACTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.9% (47/48)    IGHJ4*02     1    -------.....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_3009

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_1808   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_1808   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_1808   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_1808   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_3004

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           316     2e-88
IGHD3-10*01                                                                                           10.3    115  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGA	CTTCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGACTTCAGGCCTTTGACTCC	ARGGLQAFDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  G  G  F  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_1809   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAACAGTGGTGGATTCTACTGGACTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  90.4% (226/250)  IGHV4-31*03  49   .......................C................G.........T.A........GC...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  Y  T  G  H  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  L  D  T  S 
                    Query_1809   91   CTAGAGTGGATTGGTTACATCTTTTACACTGGACACACCTACTACAATCCGTCCCTCAGGAGTCGACTTACCATTTCACTGGACACATCT  180
V  90.4% (226/250)  IGHV4-31*03  139  ..G...........G.......A.....G...GAG............C..........A.......G.......A...G.A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       E  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  L  Q  A  F  D 
                    Query_1809   181  GAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGGGGACTTCAGGCCTTTGAC  270
V  90.4% (226/250)  IGHV4-31*03  229  A...................G.....C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------.....---------------  20
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1809   271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.7% (43/44)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_3005

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           339     2e-95
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GCCGAG	ATTGTAGTGGTACCAGCTGC	CTTTTTGGGG	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGCCGAGATTGTAGTGGTACCAGCTGCCTTTTTGGGGACTATTATTATTACGGTCTGGACGTC	AKGRDCSGTSCLFGDYYYYGLDV	240	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	10	1	0	90.9
CDR1-IMGT	27	50	24	23	1	0	95.8
FR2-IMGT	51	101	51	50	1	0	98
CDR2-IMGT	102	125	24	23	1	0	95.8
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	231	224	7	0	97


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  N  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  F  
                    Query_1810   16   GTACAGCCTCTGGATTCACCTTTAACAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTTTTA  105
V  97.0% (224/231)  IGHV3-23*01  65   ..G.....................G...........................................................C.A...  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  M  S  K  N  T  L  Y  L  
                    Query_1810   106  GTGGTAGTGGTGGTAGCACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACATGTCCAAGAACACGCTGTATCTGC  195
V  97.0% (224/231)  IGHV3-23*01  155  .........................C........................................AT......................  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------------------CDR3-IMGT-------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  R  D  C  S  G  T  S  C  L  F  G  D  
                    Query_1810   196  AAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGGCCGAGATTGTAGTGGTACCAGCTGCCTTTTTGGGGACT  285
V  97.0% (224/231)  IGHV3-23*01  245  ...................................................---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  95.0% (19/20)    IGHD2-2*01   6    ---------------------------------------------------------........A...........-------------  25
J  93.2% (55/59)    IGHJ6*02     4    ---------------------------------------------------------------------------------------...  6

                                      ---------------------->                                 
                                      Y  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1810   286  ATTATTATTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
J  93.2% (55/59)    IGHJ6*02     7    .C..C..C......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_3007

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           329     3e-92
IGHD1-1*01                                                                                            10.3    120  
IGHJ2*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD1-1*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGG	GGTAC	CCACTTCAA	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGGGTACCCACTTCAACTACTGGTACCTCGATCTC	ARWGTHFNYWYLDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  G  I  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_1811   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTCAGTAGTTATGGCATTTACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGG  90
V  92.3% (229/248)  IGHV3-30*03  47   ......................................T.......C........GC............................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  E  N  N  R  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  K  S  
                    Query_1811   91   AGTGGGTGGCGGTTATATCATATGATGAAAATAATAGATACTATGCCGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAAGTCCA  180
V  92.3% (229/248)  IGHV3-30*03  137  ..........A................G..G.....A.........A......................................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  A  S  L  Q  M  N  S  L  R  V  E  D  T  A  I  Y  Y  C  A  R  W  G  T  H  F  N  Y  
                    Query_1811   181  AGAACACGGCGTCTCTGCAAATGAACAGCCTGAGGGTTGAGGACACGGCCATCTATTACTGTGCGAGATGGGGTACCCACTTCAACTACT  270
V  92.3% (229/248)  IGHV3-30*03  227  ........CT..A.....................A.C............TG.G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-1*01   1    -----------------------------------------------------------------------.....--------------  5
J  96.2% (51/53)    IGHJ2*01     1    -------------------------------------------------------------------------------------.....  5

                                      ------------->                                  
                                      W  Y  L  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_1811   271  GGTACCTCGATCTCTGGGGCCGTGGCACCCTTGTCACTGTCTCCTCAG  318
J  96.2% (51/53)    IGHJ2*01     6    .....T.........................G................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_3002

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           392     2e-111
IGHD2-15*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGC	ATATTGTAGTGATAGTAACTGCTAC	CCGAGGGAGCG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGCATATTGTAGTGATAGTAACTGCTACCCGAGGGAGCGCTACTTTGACCAC	ARLAYCSDSNCYPRERYFDH	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  A  G  E  S  L  R  I  S  C  K  V  S  G  Y  K  F  A  T  Y
                    Query_1812   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGGCGGGGGAGTCTCTGAGGATCTCCTGTAAGGTGTCTGGATACAAGTTTGCCACCTA  90
V  93.4% (270/289)  IGHV5-51*03  6    ..................................C...............A..............GT..........GC...A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  M  Y  P  S  D  S  D  A  R  Y  S  P
                    Query_1812   91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATGTATCCTAGTGACTCTGATGCCAGATACAGCCC  180
V  93.4% (270/289)  IGHV5-51*03  96   C...................................................A....C......G...........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  G  L  E  A  S  D  T  A
                    Query_1812   181  GTCCTTTGAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGTGGCCTGGAGGCCTCGGACACCGC  270
V  93.4% (270/289)  IGHV5-51*03  186  ......CC................C.........................................CA.....A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  Y  C  A  R  L  A  Y  C  S  D  S  N  C  Y  P  R  E  R  Y  F  D  H  W  G  Q  G  T  L
                    Query_1812   271  CATGTATTACTGTGCGAGACTGGCATATTGTAGTGATAGTAACTGCTACCCGAGGGAGCGCTACTTTGACCACTGGGGCCAGGGAACCCT  360
V  93.4% (270/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  88.0% (22/25)    IGHD2-15*01  4    ------------------------...........G.G...G.......-----------------------------------------  28
J  95.7% (45/47)    IGHJ4*02     2    ------------------------------------------------------------..........T...................  31

                                                       
                                        V  T  V  S  S  
                    Query_1812   361  GGTCACCGTCTCGTCAG  377
J  95.7% (45/47)    IGHJ4*02     32   ............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_3003

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1813   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1813   91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_1813   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1813   271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_258691

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           300     8e-84
IGHD7-27*01                                                                                           12.2    32   
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TACCCCTAGGCCCGGTAACCC	CTGGGG	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATACCCCTAGGCCCGGTAACCCCTGGGGTGACTCC	ARDTPRPGNPWGDS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  G  M  N  W  V  R  Q  V  P  G  K  G  L  
                    Query_1814   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACCTTCAGGAATTATGGGATGAACTGGGTCCGCCAGGTTCCAGGAAAGGGGCTGG  90
V  88.4% (221/250)  IGHV3-48*03  47   ............................T..............T.G.....AA...................C......G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  I  D  G  D  N  T  L  Y  A  D  S  V  R  G  R  F  T  T  S  R  D  N  A  
                    Query_1814   91   AGTGGCTCTCATACATCAGTATTGATGGTGATAATACACTTTATGCAGACTCTGTGAGGGGCCGATTCACCACGTCCAGAGACAACGCCA  180
V  88.4% (221/250)  IGHV3-48*03  137  .....G.T........T....G.AG....AG..CC.T.TAC..C.............A..............TC................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  T  P  R  P  G  N  
                    Query_1814   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTATTGTGCGAGGGATACCCCTAGGCCCGGTAACC  270
V  88.4% (221/250)  IGHV3-48*03  227  ............A.......................C.....................C........A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ------------->                                
                                      P  W  G  D  S  W  G  Q  G  P  L  V  T  V  S  S
                    Query_1814   271  CCTGGGGTGACTCCTGGGGCCAGGGACCCTTGGTCACCGTCTCCTC  316
D  100.0% (6/6)     IGHD7-27*01  5    -......---------------------------------------  10
J  92.3% (36/39)    IGHJ4*02     8    -------.....A.............A..C................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_258692

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD3-3*01                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTCCTG	TACGATTTTTGGAATGGT	CAGCAGTACTTTTTCAAGAGTTTA	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCTGTACGATTTTTGGAATGGTCAGCAGTACTTTTTCAAGAGTTTAGACGTC	ARVLYDFWNGQQYFFKSLDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  R  F  A  N  S
                    Query_1815   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGGTTTGCCAACTC  90
V  93.4% (270/289)  IGHV5-51*01  6    ..................................................A...........................C...A...G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  G  P
                    Query_1815   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGAAAAGGCCTGGAGTGGATGGGCGTCATCTACCCTGGTGACTCTGATACCAGATACGGCCC  180
V  93.4% (270/289)  IGHV5-51*01  96   ........G.....................G....................GA.......T........................A....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  G  L  R  A  S  D  T  A
                    Query_1815   181  GTCCTTCCAGGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTATCTTCACTGGAGCGGCCTGAGGGCCTCGGACACCGC  270
V  93.4% (270/289)  IGHV5-51*01  186  .........A..................................G.........C..G..G......A......A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  F  C  A  R  V  L  Y  D  F  W  N  G  Q  Q  Y  F  F  K  S  L  D  V  W  G  Q  G  T  S
                    Query_1815   271  CATGTATTTCTGTGCGAGAGTCCTGTACGATTTTTGGAATGGTCAGCAGTACTTTTTCAAGAGTTTAGACGTCTGGGGCCAAGGGACTTC  360
V  93.4% (270/289)  IGHV5-51*01  276  ........A..........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  94.4% (17/18)    IGHD3-3*01   5    -------------------------.............G....-----------------------------------------------  22
J  94.9% (37/39)    IGHJ6*02     24   -------------------------------------------------------------------....................CA.  46

                                                      
                                        V  T  V  S  S 
                    Query_1815   361  GGTCACCGTCTCCTCA  376
J  94.9% (37/39)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_258695

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           380     1e-107
IGHD3-16*01                                                                                           14.1    9.3   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACAAGCGGGCGGCACC	TTTGGGG	CGAGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTAC	ARGQAGGTFGASDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  S  F  N  D  Y 
                    Query_1816   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAATGAAGGTCTCCTGCAAGGCTTCCGGTTACAGCTTTAACGACTAT  91
V  92.0% (266/289)  IGHV1-18*01  7    .............................................G......................T.......C.....C.AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  M  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  A  Y  N  G  N  T  K  Y  S  E 
                    Query_1816   92   GGTATCACTTGGATGCGACAGGCCCCTGGACAGGGGCCTGAGTGGATGGGATGGATCAGCGCATATAATGGTAACACAAAGTATTCAGAG  181
V  92.0% (266/289)  IGHV1-18*01  97   .......GC...G...................A....T........................T..C..............C...G..C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  L  Q  G  R  L  I  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_1816   182  AGGCTCCAGGGCAGACTCATCATGACCACAGACACATCCACGAGCACAGCCTACATGGAATTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.0% (266/289)  IGHV1-18*01  187  .A.............G...C.......................................GC.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  G  Q  A  G  G  T  F  G  A  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1816   272  GTCTATTATTGTGCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  92.0% (266/289)  IGHV1-18*01  277  ..G.....C..........---------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD3-16*01  15   ------------------------------------.......---------------------------------------------  21
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_258696

Length=413
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            405     4e-115
IGHD4-17*01                                                                                           19.9    0.19  
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CTGGGGGCGATACAAGAGGGCCCCTCAATCCT	TGACAACGGTGGCTAC	ACAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCTGGGGGCGATACAAGAGGGCCCCTCAATCCTTGACAACGGTGGCTACACAGGCCTTTGACCTC	VRGWGRYKRAPQSLTTVATQAFDL	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  I  N  Y
                    Query_1817   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATACAGTTTCATCAATTA  90
V  94.5% (275/291)  IGHV1-8*01   6    ..................G...............................................T..........CC....C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  F  A  Q
                    Query_1817   91   TGATATCAATTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGCGGTAACACAGGCTTTGCACA  180
V  94.5% (275/291)  IGHV1-8*01   96   .........C...........................................................T.............A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  T  T  A  Y  M  E  L  S  N  L  R  F  D  D  T  A
                    Query_1817   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAACCACAGCCTACATGGAACTGAGCAACCTGAGATTTGACGACACGGC  270
V  94.5% (275/291)  IGHV1-8*01   186  ............................................G...............G.......G........C...G........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------------CDR3-IMGT------------------------------>     
                                        V  Y  Y  C  V  R  G  W  G  R  Y  K  R  A  P  Q  S  L  T  T  V  A  T  Q  A  F  D  L  W  G
                    Query_1817   271  CGTGTATTATTGTGTGAGAGGCTGGGGGCGATACAAGAGGGCCCCTCAATCCTTGACAACGGTGGCTACACAGGCCTTTGACCTCTGGGG  360
V  94.5% (275/291)  IGHV1-8*01   276  .........C....C......---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R  G                                                                     
D  87.5% (14/16)    IGHD4-17*01  1    -----------------------------------------------------....T......A....---------------------  16
J  90.7% (39/43)    IGHJ4*02     5    ---------------------------------------------------------------------------.......TA......  19

                                                                  
                                        L  G  T  L  L  T  V  S  S 
                    Query_1817   361  CCTGGGAACCCTGCTCACCGTCTCCTCA  388
J  90.7% (39/43)    IGHJ4*02     20   ..A..........G..............  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40498920


Query= Query_258699

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            313     1e-87
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CT	TATTGTAGTAGTAGCATCTGCTA	CCA	TGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTTATTGTAGTAGTAGCATCTGCTACCATGACCAC	ATYCSSSICYHDH	230	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	107	7	0	93.9
CDR3-IMGT (germline)	230	233	4	4	0	0	100
Total	N/A	N/A	220	210	10	0	95.5


Alignments

                                     <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                      S  G  V  T  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  K  H  D 
                    Query_1818  14   TCTGGAGTCACCTTTAGTACCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCACGAT  103
V  95.5% (210/220)  IGHV3-7*01  73   ......T............G..................................................................A...  162
                                      S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  K  Q  D 

                                     -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                      G  S  E  K  Y  C  A  D  S  V  K  G  R  F  A  I  S  R  D  N  A  K  N  S  L  F  L  Q  M  S 
                    Query_1818  104  GGAAGTGAGAAATACTGTGCGGACTCTGTGAAGGGCCGATTCGCCATCTCCAGAGACAACGCCAAGAACTCACTGTTTCTGCAAATGAGT  193
V  95.5% (210/220)  IGHV3-7*01  163  ................A..T......................A.................................A...........AC  252
                                      G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                     -----------------------------------><--------------CDR3-IMGT-------------->               
                                      S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  Y  C  S  S  S  I  C  Y  H  D  H  W  G  Q  G  I 
                    Query_1818  194  AGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGACTTATTGTAGTAGTAGCATCTGCTACCATGACCACTGGGGCCAGGGAATC  283
V  95.5% (210/220)  IGHV3-7*01  253  ..........................G.............--------------------------------------------------  292
                                      S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                    
D  91.3% (21/23)    IGHD2-2*01  5    ------------------------------------------.............C..G......-------------------------  27
J  95.1% (39/41)    IGHJ4*02    8    --------------------------------------------------------------------....T...............C.  29

                                                        
                                      L  V  T  V  S  S  
                    Query_1818  284  CTGGTCACCGTCTCCTCAG  302
J  95.1% (39/41)    IGHJ4*02    30   ...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_242706

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           336     1e-94
IGHD5-12*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAGACC	GGATATAGTGGCTACG	GCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCAGACCGGATATAGTGGCTACGGCCCTTTTGACTAC	ARDQTGYSGYGPFDY	235	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	18	21	4	4	0	0	100
CDR1-IMGT	22	45	24	21	3	0	87.5
FR2-IMGT	46	96	51	51	0	0	100
CDR2-IMGT	97	120	24	23	1	0	95.8
FR3-IMGT	121	234	114	113	1	0	99.1
CDR3-IMGT (germline)	235	242	8	8	0	0	100
Total	N/A	N/A	225	220	5	0	97.8


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  Y  H  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_1819   18   GTCTGGATTCACCTTCAGTTACCATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  107
V  97.8% (220/225)  IGHV3-33*01  72   ...................AG.T...................................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  R  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_1819   108  TGGAAGAAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAA  197
V  97.8% (220/225)  IGHV3-33*01  162  ......T...................................................................................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------CDR3-IMGT----------------->        
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Q  T  G  Y  S  G  Y  G  P  F  D  Y  W  G  Q
                    Query_1819   198  CAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGACCAGACCGGATATAGTGGCTACGGCCCTTTTGACTACTGGGGCCA  287
V  97.8% (220/225)  IGHV3-33*01  252  ...........................G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (16/16)   IGHD5-12*01  3    ----------------------------------------------------................----------------------  18
J  100.0% (43/43)   IGHJ4*02     6    -------------------------------------------------------------------------.................  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_1819   288  GGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (43/43)   IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_217530

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           361     4e-102
IGHD3-22*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCACCGATCC	TATAACGATGATAGTAGTGGTTA	CC	ACTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCACCGATCCTATAACGATGATAGTAGTGGTTACCACTTGGACTAT	ARVHRSYNDDSSGYHLDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         F  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  E  M  N  W  V  R  Q  T  P  G  K  G  L  
                    Query_1820   1    GGTTCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAGTTATGAGATGAACTGGGTCCGCCAGACTCCAGGGAAGGGGTTGG  90
V  96.4% (240/249)  IGHV3-48*03  47   ...C.......................................T........A..................G..............C...  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  G  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1820   91   AGTGGGTTTCATACATTAGTAGTAGTGGTAGTGGCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (240/249)  IGHV3-48*03  137  ................................AC........................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  F  C  A  R  V  H  R  S  Y  N  D  
                    Query_1820   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTTTATTTCTGTGCGAGAGTCCACCGATCCTATAACGATG  270
V  96.4% (240/249)  IGHV3-48*03  227  ........................................G................A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.3% (21/23)    IGHD3-22*01  2    --------------------------------------------------------------------------------...T..T...  11

                                      IMGT--------------------->                                  
                                      D  S  S  G  Y  H  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1820   271  ATAGTAGTGGTTACCACTTGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  330
D  91.3% (21/23)    IGHD3-22*01  12   .............-----------------------------------------------  24
J  93.3% (42/45)    IGHJ4*02     4    ---------------....T.....C.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_242707

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           272     2e-75
IGHD3-10*01                                                                                           10.3    122  
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCAC	GGTTC	C	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCACGGTTCCTGATGCTTTTGATGTC	ARGTVPDAFDV	258	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	143	39	18	6	15	46.2
FR3-IMGT	144	257	114	106	8	0	93
CDR3-IMGT (germline)	258	264	7	7	0	0	100
Total	N/A	N/A	264	221	28	15	83.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  D  V  N  E  Y  T  M  N  W  V  R  Q  T  P  E  K  G  M  
                    Query_1821   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGACGTCAATGAATATACCATGAACTGGGTGCGTCAGACTCCAGAGAAGGGCATGG  90
V  83.7% (221/264)  IGHV3-21*01  47   ...................................AC.T...G.AGC....G............C..C...G......G......GC...  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><--------------CDR2-IMGT--------------><------------------------------------
                                      E  W  V  S  S  M  S  S  S  S  K  R  I  S  T  G  S  R  Y  Y  P  D  S  A  K  G  R  F  T  I  
                    Query_1821   91   AGTGGGTCTCATCCATGAGTAGCTCATCCAAGCGTATCAGTACTGGTTCCAGATACTACCCAGACTCAGCGAAGGGCCGCTTCACCATCT  180
V  83.7% (221/264)  IGHV3-21*01  137  ................T.....T---------------....G.A...A..T.......G.........T.........A..........  211
                                      E  W  V  S  S  I  S  S                 S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  

                                      ----------------FR3-IMGT----------------------------------------------------><-----------C
                                      S  R  D  N  A  K  N  S  L  Y  L  Q  I  N  N  L  R  T  D  D  T  A  V  Y  Y  C  A  R  G  T  
                    Query_1821   181  CCAGAGACAACGCCAAGAACTCACTATATCTGCAAATCAACAACCTGAGAACCGACGACACGGCTGTGTATTACTGTGCGAGAGGCACGG  270
V  83.7% (221/264)  IGHV3-21*01  212  .........................G...........G....G.......G....G............................------  295
                                      S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R        
D  100.0% (5/5)     IGHD3-10*01  11   ----------------------------------------------------------------------------------------..  12

                                      DR3-IMGT----------->                                 
                                      V  P  D  A  F  D  V  W  G  Q  G  T  K  V  T  V  S  S 
                    Query_1821   271  TTCCTGATGCTTTTGATGTCTGGGGCCAAGGGACAAAGGTCACCGTCTCTTCA  323
D  100.0% (5/5)     IGHD3-10*01  13   ...--------------------------------------------------  15
J  98.0% (48/49)    IGHJ3*01     1    ----................................T................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_87399

Length=318
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           304     9e-85
IGHD4-17*01                                                                                           16.1    2.0  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCG	ACGGTGAC	ACCGAGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACGGTGACACCGAGAATGACTAC	AADGDTENDY	230	259	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	232	3	3	0	0	100
Total	N/A	N/A	220	207	13	0	94.1


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  L  T  F  S  S  F  G  M  H  W  V  R  Q  P  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_1822   13   GTCTGGACTCACCTTCAGCAGCTTTGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  94.1% (207/220)  IGHV3-33*01  72   .......T..........T....A......................G...........................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  K  K  Y  Y  T  D  S  V  K  G  R  F  I  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_1822   103  TGGAAGTAAGAAATACTATACAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCAAGAACACGTTGTATCTGCAGATGAA  192
V  94.1% (207/220)  IGHV3-33*01  162  .........T.........G........................C............................C..........A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------CDR3-IMGT--------->                       
                                        S  L  R  V  D  D  T  A  V  Y  F  C  A  A  D  G  D  T  E  N  D  Y  W  G  Q  G  T  L  V  T
                    Query_1822   193  CAGCCTGAGAGTCGACGACACGGCTGTCTATTTCTGTGCGGCCGACGGTGACACCGAGAATGACTACTGGGGCCAGGGAACCCTGGTCAC  282
V  94.1% (207/220)  IGHV3-33*01  252  ...........C...G...........G....A.......--------------------------------------------------  291
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                   
D  100.0% (8/8)     IGHD4-17*01  6    --------------------------------------------........--------------------------------------  13
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------------------------..............................  37

                                                 
                                        V  S  S  
                    Query_1822   283  CGTCTCCTCAG  293
J  100.0% (41/41)   IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30726981


Query= Query_87398

Length=410
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           403     1e-114
IGHD3-9*01                                                                                            12.2    38    
IGHJ5*01                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-9*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAGGGGCCTACAGGGAATAG	TTGACT	CCCCAAATCC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAGGGGCCTACAGGGAATAGTTGACTCCCCAAATCCCAACTGGTTCGACTCC	ARDRGLQGIVDSPNPNWFDS	292	351	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	103	11	0	90.4
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	277	19	0	93.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  V  S  G  G  T  F  S 
                    Query_1823   4    CAGGTTCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGTTTCTGGAGGCACCTTCAGC  93
V  93.6% (277/296)  IGHV1-69*01  1    .....G................................................................C...................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  G  I  I  P  I  F  G  T  G  G  Q 
                    Query_1823   94   AACTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGCGGGATCATCCCTATCTTTGGGACAGGAGGCCAG  183
V  93.6% (277/296)  IGHV1-69*01  91   .G.....C...........................................A....A....................T....C.AA.T.C  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  E  R  F  Q  D  R  V  T  F  T  A  D  E  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  E  D 
                    Query_1823   184  GCAGAGAGGTTCCAGGACAGAGTCACTTTTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGCGCAGCCTGAGATCTGAGGAC  273
V  93.6% (277/296)  IGHV1-69*01  181  ...C...A........G.........GA.........................................A....................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  V  Y  Y  C  A  R  D  R  G  L  Q  G  I  V  D  S  P  N  P  N  W  F  D  S  W  G  Q  G 
                    Query_1823   274  ACGGCCGTCTATTACTGTGCGAGAGACAGGGGCCTACAGGGAATAGTTGACTCCCCAAATCCCAACTGGTTCGACTCCTGGGGCCAGGGA  363
V  93.6% (277/296)  IGHV1-69*01  271  ........G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD3-9*01   14   ----------------------------------------------......--------------------------------------  19
J  98.0% (49/50)    IGHJ5*01     2    --------------------------------------------------------------........................A...  29

                                                            
                                       T  L  V  T  V  S  S  
                    Query_1823   364  ACCCTGGTCACCGTCTCCTCAG  385
J  98.0% (49/50)    IGHJ5*01     30   ......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40183344


Query= Query_87397

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           319     2e-89
IGHD3-3*01                                                                                            14.1    8.1  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TGC	GGAGTGG	ACTTATG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGCGGAGTGGACTTATGGACTCC	ARLRSGLMDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	14	7	0	66.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  I  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  N  G 
                    Query_1824   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAACATTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCGGGGAACGGA  90
V  90.8% (227/250)  IGHV4-39*01  49   ...............................G........G..G..G.................................A.....G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  V  S  N  S  G  N  T  Y  Y  N  P  S  L  K  R  R  V  T  V  S  V  D  T  S 
                    Query_1824   91   CTGGAGTGGCTTGGGAGTGTCTCGAACAGTGGTAACACCTACTACAACCCGTCCCTCAAGCGTCGGGTCACCGTATCCGTAGACACGTCC  180
V  90.8% (227/250)  IGHV4-39*01  139  .........A........A...ATT.T.....G.G.........................A....A......A.................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       N  H  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  R  S  G  L  M  D 
                    Query_1824   181  AATCATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTTCTGTGCGAGACTGCGGAGTGGACTTATGGAC  270
V  90.8% (227/250)  IGHV4-39*01  229  ..GA.C.............A......................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   15   -------------------------------------------------------------------------.......----------  21
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1824   271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_87396

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            336     1e-94
IGHD2-8*01                                                                                            25.7    0.003
IGHJ3*02                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD2-8*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAC	CGGCTTTCCACCACGTC	TTGTAGTCATGGTGTATGC	AACACTACGGACTCTGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACCGGCTTTCCACCACGTCTTGTAGTCATGGTGTATGCAACACTACGGACTCTGGTTTTGATATT	AHRLSTTSCSHGVCNTTDSGFDI	244	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	23	4	0	85.2
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                     <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                      T  L  S  L  T  C  T  F  S  G  F  S  L  S  S  S  G  V  S  V  G  W  I  R  Q  P  P  G  K  A 
                    Query_1825  1    ACCCTGTCCCTCACCTGCACCTTCTCTGGGTTCTCACTCAGTAGTAGTGGAGTGAGTGTGGGCTGGATCCGTCAGCCCCCAGGAAAGGCC  90
V  93.2% (232/249)  IGHV2-5*01  49   .....CA.G..G.............................C.C..........G...................................  138
                                      T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R  Q  P  P  G  K  A 

                                     -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                      L  E  W  L  A  L  V  Y  W  Y  D  D  K  R  Y  S  P  S  L  K  S  R  L  T  I  T  K  D  T  S 
                    Query_1825  91   CTGGAGTGGCTTGCACTCGTTTATTGGTATGATGATAAGCGCTACAGTCCATCTCTGAAGAGCAGGCTCACCATCACCAAGGACACTTCC  180
V  93.2% (232/249)  IGHV2-5*01  139  ..................A........A...................C......................................C...  228
                                      L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T  I  T  K  D  T  S 

                                     --FR3-IMGT----------------------------------------------------><--------------------------
                                      R  N  Q  V  V  L  K  M  T  S  M  D  P  V  D  T  A  T  Y  Y  C  A  H  R  L  S  T  T  S  C 
                    Query_1825  181  AGAAATCAGGTGGTCCTTAAAATGACCAGCATGGACCCAGTGGACACAGCCACTTATTACTGTGCACACCGGCTTTCCACCACGTCTTGT  270
V  93.2% (232/249)  IGHV2-5*01  229  .A...C.............C........A.........T..............A...............---------------------  297
                                      K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H                      
D  89.5% (17/19)    IGHD2-8*01  7    --------------------------------------------------------------------------------------....  10

                                     ---CDR3-IMGT----------------------------->                                  
                                      S  H  G  V  C  N  T  T  D  S  G  F  D  I  W  G  Q  G  A  A  V  T  V  S  S  
                    Query_1825  271  AGTCATGGTGTATGCAACACTACGGACTCTGGTTTTGATATTTGGGGCCAAGGGGCAGCAGTCACCGTCTCTTCAG  346
D  89.5% (17/19)    IGHD2-8*01  11   .C.A...........-------------------------------------------------------------  25
J  88.6% (39/44)    IGHJ3*02    7    --------------------------------.........C............A..ATG................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_87395

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           346     2e-97
IGHD3-3*01                                                                                            14.1    8.5  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	CTG	TTTTTGG	CGCAGCGAATGATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCTGTTTTTGGCGCAGCGAATGATAACTACGGTATGGACGTC	ARAVFGAANDNYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1826   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGGTATTGGATACACTGGGTCCGTCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-74*01  47   ..............................................C..C.....G...........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  H  I  N  S  D  G  S  T  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1826   91   TTTGGGTCTCACATATTAACAGTGATGGGAGTACCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-74*01  137  .G..........G......T.............G.....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  V  F  G  A  A  N  
                    Query_1826   181  AGAATACCCTGTATCTACAATTGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGAGCTGTTTTTGGCGCAGCGAATG  270
V  94.4% (235/249)  IGHV3-74*01  227  ....C..G........G...A...............................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-3*01   10   ------------------------------------------------------------------------.......-----------  16

                                      T------------------>                                 
                                      D  N  Y  G  M  D  V  R  G  Q  G  T  T  V  T  V  S  S 
                    Query_1826   271  ATAACTACGGTATGGACGTCCGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  98.0% (49/50)    IGHJ6*02     13   ---.................T................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_87394

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            361     4e-102
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	TTGGCAATTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGGCAATTCCTACGCTATGGACGTC	ARVGNSYAMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1827  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-7*01  47   .........................................................G................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  H  D  G  S  E  K  K  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1827  91   AATGGGTGGCCAACATAAAACACGATGGAAGTGAGAAAAAGTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (240/249)  IGHV3-7*01  137  .G.................G..A...............T.C.................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                     K  N  S  L  Y  L  Q  V  T  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  N  S  Y  A  M  
                    Query_1827  181  AGAACTCACTGTATCTGCAAGTGACCAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGTTGGCAATTCCTACGCTATGG  270
V  96.4% (240/249)  IGHV3-7*01  227  ....................A...A...........................G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  98.0% (48/49)    IGHJ6*02    14   -------------------------------------------------------------------------------.....G.....  24

                                     ---->                                 
                                     D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1827  271  ACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  308
J  98.0% (48/49)    IGHJ6*02    25   ......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_87391

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_1828   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.9% (279/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_1828   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_1828   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  .......C.....................................C...........G......A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_1828   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.9% (279/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_1828   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_87390

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_1829   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG....T..............A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1829   91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.4% (228/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_1829   181  CAGTTCTCCCTGAAGCTGAACTCTGTGACGGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  ...................G.........C.................G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_1829   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_82264

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            367     5e-104
IGHJ4*02                                                                                              75.7    5e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	CTTTTAAGGGGCACGGAAGCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTTTAAGGGGCACGGAAGCAACTAC	ARAFKGHGSNY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1830  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-7*03  47   .............................................G............................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  Q  D  G  G  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1830  91   AGTGGGTGGCCAACATAAAGCAAGATGGAGGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (242/249)  IGHV3-7*03  137  .............................A............................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                     K  S  S  L  H  L  Q  M  S  G  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  F  K  G  H  G  S  
                    Query_1830  181  AGAGCTCACTGCATCTGCAAATGAGCGGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAGAGCTTTTAAGGGGCACGGAAGCA  270
V  97.2% (242/249)  IGHV3-7*03  227  ...A.......T............A.A.........................G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                     ---->                                  
                                     N  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1830  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (39/39)   IGHJ4*02    10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_141658

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           324     8e-91
IGHD3-10*01                                                                                           12.2    35   
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTAAATTGGGAATCCGGGGG	GGTGCGGGG	GTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTAAATTGGGAATCCGGGGGGGTGCGGGGGTTTTTGACCAC	ATKLGIRGGAGVFDH	275	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	85	24	9	6	9	37.5
FR2-IMGT	86	136	51	48	3	0	94.1
CDR2-IMGT	137	160	24	19	5	0	79.2
FR3-IMGT	161	274	114	105	9	0	92.1
CDR3-IMGT (germline)	275	278	4	4	0	0	100
Total	N/A	N/A	287	249	29	9	86.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  Q  P  G  S  S  V  K  V  S  C  K  A  S  S           T  S  Y
                    Query_1831   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGCAGCCTGGGTCCTCGGTGAAGGTTTCCTGCAAGGCCAGTAGT---------ACCAGTTA  81
V  86.8% (249/287)  IGHV1-69*01  6    ..................G............A......................C...........TTC.G.AGGCACCTTC.G...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  S  W  V  R  L  A  P  G  Q  G  L  E  W  M  G  G  I  T  P  M  F  G  T  T  N  Y  A  Q
                    Query_1831   82   TTTTATCAGCTGGGTGCGACTGGCCCCTGGACAAGGCCTTGAGTGGATGGGAGGCATCACCCCTATGTTTGGAACAACTAACTACGCACA  171
V  86.8% (249/287)  IGHV1-69*01  96   .GC.................A...............G.................G....T......C.....T...G.A...........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  A  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  G  D  T  A
                    Query_1831   172  GAAGTTTCAGGGCAGAGTCGCGATTACCGCGGACGAATCTACGAGCACCGCCTACATGGAGTTGAGCAGCCTGAGATCGGGGGACACGGC  261
V  86.8% (249/287)  IGHV1-69*01  186  ......C............A...................C........A............C................T.A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  T  K  L  G  I  R  G  G  A  G  V  F  D  H  W  G  Q  G  T  P  V  T  V  S  A
                    Query_1831   262  CGTATATTATTGTGCGACTAAATTGGGAATCCGGGGGGGTGCGGGGGTTTTTGACCACTGGGGCCAGGGAACCCCAGTCACCGTCTCCGC  351
V  86.8% (249/287)  IGHV1-69*01  276  ...G.....C.......-------------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                           
D  88.9% (8/9)      IGHD3-10*01  11   -------------------------------------...T.....--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    -------------------------------------------------......T..................TG............T.  46

                                        
                                        
                    Query_1831   352  AG  353
J  90.7% (39/43)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_141659

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTCG	TATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCGTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_1832   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_1832   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTTCCATATCAGTGGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ..................................G..................................A..........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  K  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  S  Y  G  S  G 
                    Query_1832   181  AAGAACAAGTTCTCCCTGAAGCTGACCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTCGTATGGTTCGGGG  270
V  96.4% (241/250)  IGHV4-31*03  229  ......C..................G............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (21/21)   IGHD3-10*01  8    ------------------------------------------------------------------------------............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1832   271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (21/21)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_141656

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD1-26*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CAAATC	AGTGGGACCTAC	CATA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACAAATCAGTGGGACCTACCATATTGACCAC	AKQISGTYHIDH	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1833   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTATGCCATGAGTTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  92.3% (229/248)  IGHV3-23*01  47   ...........................................C..C...........C.................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  Y  T  G  G  S  I  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1833   91   AGTGGGTCTCATCTATTACTTATACTGGTGGTAGTATATACTACGCAGAGTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.3% (229/248)  IGHV3-23*01  137  ...........G......G.GG..G.........C.C............C........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      N  N  T  L  Y  L  H  M  D  S  L  R  V  E  D  T  A  V  Y  F  C  A  K  Q  I  S  G  T  Y  H  
                    Query_1833   181  ACAACACGCTGTATCTGCACATGGACAGCCTGAGAGTCGAGGACACGGCCGTGTACTTCTGTGCGAAACAAATCAGTGGGACCTACCATA  270
V  92.3% (229/248)  IGHV3-23*01  227  .G.................A...A............C...............A..T.A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  91.7% (11/12)    IGHD1-26*01  6    --------------------------------------------------------------------------.......G....----  17

                                      ------->                                  
                                      I  D  H  W  G  Q  G  N  L  V  T  V  S  S  
                    Query_1833   271  TTGACCACTGGGGCCAGGGAAACCTGGTCACCGTCTCCTCAG  312
J  95.2% (40/42)    IGHJ4*02     7    .....T...............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_141657

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           336     1e-94
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCTTGCAACC	TACAATGATGATAGTGGTT	N/A	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCTTGCAACCTACAATGATGATAGTGGTTACTATTTTGACTAT	AKDLATYNDDSGYYFDY	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	22	2	0	91.7
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	233	224	9	0	96.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  N  Y  D  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  T  A  I 
                    Query_1834   13   TGTGCAGCCTCTGGATTCACCTTCAGTAACTATGACATCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGACAGCTATA  102
V  96.1% (224/233)  IGHV3-30*18  64   ............................G.....G...G..........................................G...T....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  Y  D  G  S  H  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_1834   103  TCATATGATGGAAGTCATAAGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTG  192
V  96.1% (224/233)  IGHV3-30*18  154  ...............A....A.....................................................................  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------------CDR3-IMGT---------------
                                       Q  M  N  S  L  R  V  E  D  T  A  M  Y  Y  C  A  K  D  L  A  T  Y  N  D  D  S  G  Y  Y  F 
                    Query_1834   193  CAAATGAACAGCCTGAGAGTTGAGGACACGGCTATGTATTACTGTGCGAAAGACCTTGCAACCTACAATGATGATAGTGGTTACTATTTT  282
V  96.1% (224/233)  IGHV3-30*18  244  ...................C.............G...................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  84.2% (16/19)    IGHD3-22*01  5    ---------------------------------------------------------------...T.....AG........--------  23
J  95.8% (46/48)    IGHJ4*02     1    ----------------------------------------------------------------------------------....C...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1834   283  GACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  95.8% (46/48)    IGHJ4*02     9    .....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_141654

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           419     2e-119
IGHD2-2*02                                                                                            19.9    0.18  
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAAAGTGGCGGGGA	ACCAGCTGTTATA	AAGAGCGCTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCC	ARGKWRGTSCYKERCWFDP	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	278	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  S  N  Y
                    Query_1835   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTAGCAACTA  90
V  96.5% (278/288)  IGHV5-51*03  6    .................................................................G...........G.....C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  R  Y  R  P
                    Query_1835   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATAATCTATCCTGGTGACTCTGAGACCAGATACAGACC  180
V  96.5% (278/288)  IGHV5-51*03  96   ........G.............................................C....................T...........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  W  D  T  A
                    Query_1835   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTGGGACACCGC  270
V  96.5% (278/288)  IGHV5-51*03  186  ................................................................................C.........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  G  K  W  R  G  T  S  C  Y  K  E  R  C  W  F  D  P  W  G  Q  G  T  L  V
                    Query_1835   271  CATGTATTATTGTGCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  360
V  96.5% (278/288)  IGHV5-51*03  276  .........C........------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  92.3% (12/13)    IGHD2-2*02   17   ----------------------------------........C....-------------------------------------------  29
J  100.0% (47/47)   IGHJ5*02     5    ---------------------------------------------------------.................................  37

                                                    
                                        T  V  S  S  
                    Query_1835   361  CACCGTCTCCTCAG  374
J  100.0% (47/47)   IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_141655

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           400     9e-114
IGHD2-21*01                                                                                           18.0    0.69  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	G	ATTGCGGTGGTG	TAGTGATGGAACTTGTTACTCTGGTTCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTAT	ARRLRWCSDGTCYSGSFEY	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	70	4	0	94.6
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	294	275	19	0	93.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  K  F  T  
                    Query_1836   4    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAAGTTTACCA  93
V  93.5% (275/294)  IGHV5-51*01  2    ....G........G....................A........G.....................................GC.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  A  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  F  P  R  D  S  D  T  R  Y  
                    Query_1836   94   GCTATTGGATCGGCTGGGCGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTCGTGACTCCGATACCAGATATA  183
V  93.5% (275/294)  IGHV5-51*01  92   ....C.............T........T...........................G.......A....G.......T...........C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  Q  D  Q  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  D  S  L  K  A  S  D  
                    Query_1836   184  ACCCGTCCTTCCAAGACCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTACCTGCAGTGGGACAGCCTGAAGGCCTCGGACA  273
V  93.5% (275/294)  IGHV5-51*01  182  G..............G.......................A............................AG....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  M  Y  Y  C  A  R  R  L  R  W  C  S  D  G  T  C  Y  S  G  S  F  E  Y  W  G  Q  G  T  
                    Query_1836   274  CCGCCATGTATTACTGTGCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTATTGGGGCCAGGGAACCC  363
V  93.5% (275/294)  IGHV5-51*01  272  ........................------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  91.7% (11/12)    IGHD2-21*01  6    -------------------------....T.......-----------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------------------------.....C..C................  30

                                                        
                                      L  V  T  V  S  S  
                    Query_1836   364  TGGTCACCGTCTCCTCAG  381
J  95.3% (41/43)    IGHJ4*02     31   ..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_141652

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           311     4e-87
IGHD2-21*02                                                                                           23.8    0.011
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGGAACTGGA	GGTGGTGACTGC	CTT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGGAACTGGAGGTGGTGACTGCCTTGACCTC	ARAGTGGGDCLDL	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	224	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  G  F  G  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_1837   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGCTTCAGTGGCTTTGGCATGCATTGGGTCCGCCAGGCTCCAGGCAGGGGCCTGG  90
V  90.0% (224/249)  IGHV3-33*01  47   ....................................C.......A...A.........C......................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  R  F  D  G  S  N  T  N  Y  A  A  F  A  K  S  R  F  I  I  S  R  D  N  S  
                    Query_1837   91   AGTGGGTGGCACTTATACGGTTTGATGGGAGTAATACAAATTATGCAGCCTTCGCGAAGAGTCGATTCATCATCTCCAGAGACAATTCCA  180
V  90.0% (224/249)  IGHV3-33*01  137  ...........G.....T...A......A.......A.T.C.......A..C..T....G.C.......C....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  M  D  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  A  G  T  G  G  G  D  
                    Query_1837   181  AGAACACGATGGATCTGCAGATGAACAGTCTGAGAGTCGAGGATACGGCTGTGTATTACTGTGCGAGAGCCGGAACTGGAGGTGGTGACT  270
V  90.0% (224/249)  IGHV3-33*01  227  ........C..T.......A........C.......C......C.........................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD2-21*02  11   --------------------------------------------------------------------------------..........  20

                                      ---------->                                  
                                      C  L  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1837   271  GCCTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
D  100.0% (12/12)   IGHD2-21*02  21   ..-------------------------------------------  22
J  97.5% (39/40)    IGHJ5*02     12   -----....C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_82266

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           330     1e-92
IGHD2-15*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CCTCTGGTT	TTGTAGTGGTGCTAACTGCTACTC	GGACG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCCTCTGGTTTTGTAGTGGTGCTAACTGCTACTCGGACGACTTTGGCTAC	ALWFCSGANCYSDDFGY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	21	30	10	9	1	0	90
CDR1-IMGT	31	54	24	23	1	0	95.8
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	129	24	20	4	0	83.3
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	245	2	2	0	0	100
Total	N/A	N/A	225	218	7	0	96.9


Alignments

                                      <FR1-IMGT><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><----
                                        G  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  S  S
                    Query_1838   21   TGGAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATACAGTAG  110
V  96.9% (218/225)  IGHV3-21*01  66   ..C........................C.......................................................C..T...  155
                                        A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S

                                      ---CDR2-IMGT------><----------------------------------------------------FR3-IMGT----------
                                        S  S  S  R  S  V  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q
                    Query_1838   111  TAGTAGTAGTCGTTCCGTATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCA  200
V  96.9% (218/225)  IGHV3-21*01  156  ..........A...A.A.........................................................................  245
                                        S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q

                                      ------------------------------------------><--------------------CDR3-IMGT-----------------
                                        M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  L  W  F  C  S  G  A  N  C  Y  S  D  D  F  G
                    Query_1838   201  AATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCCCTCTGGTTTTGTAGTGGTGCTAACTGCTACTCGGACGACTTTGG  290
V  96.9% (218/225)  IGHV3-21*01  246  .............................................---------------------------------------------  290
                                        M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                             
D  91.7% (22/24)    IGHD2-15*01  7    ------------------------------------------------------...........G..G.........------------  30
J  97.8% (44/45)    IGHJ4*02     4    -----------------------------------------------------------------------------------......A  10

                                      --->                                  
                                        Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1838   291  CTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
J  97.8% (44/45)    IGHJ4*02     11   ......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_141651

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1839   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (222/245)  IGHV4-59*01  49   .......................................AG..G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  R  Y  S  G  G  T  N  Y  N  R  S  L  R  S  R  L  T  I  S  L  D  K  S  K  N 
                    Query_1839   91   TGGGTTGGCTATATCCGTTACAGTGGGGGCACCAACTACAACCGCTCCCTCAGGAGTCGACTCACCATCTCACTGGACAAGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  ...A....G......TA..........A...............C........A.......G.......A...G.A....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_1839   181  CAGTTCTCCGTGAACCTGCGATCTGTTACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  90.6% (222/245)  IGHV4-59*01  229  .........C....G...A.C.....G....................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_1839   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_82267

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           377     1e-106
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	ARPSSASGWHFDN	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	265	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_1840   1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCAGTTA  90
V  91.7% (265/289)  IGHV5-51*03  6    .........................G.............G.........................G.........C.GC..T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  D  I  R  Y  S  P
                    Query_1840   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGATATTAGATATAGTCC  180
V  91.7% (265/289)  IGHV5-51*03  96   C.......G..................................................AT...GG...........CC.....C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  G
                    Query_1840   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGG  270
V  91.7% (265/289)  IGHV5-51*03  186  .............................C..A.AA........G............................................C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1840   271  CATGTATTACTGTGCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  91.7% (265/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_140529

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           358     4e-101
IGHD3-22*01                                                                                           27.6    8e-04 
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	CAGG	ACTATGATAGTAGT	AGGGGGG	ACGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAGGACTATGATAGTAGTAGGGGGGACGATAAGGACGTC	VRQDYDSSRGDDKDV	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_1841   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (239/249)  IGHV4-31*03  49   ................................................G.........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  S  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  S  M  S  V  D  T  S 
                    Query_1841   91   CTGGAGTGGATTGGATACATCTATTCCAGTGGGAGTACCTACTACAACCCGTCCCTCAAGAGTCGAGTTAGCATGTCCGTAGACACGTCT  180
V  96.0% (239/249)  IGHV4-31*03  139  ..............G..........A.........C..................................C...A..A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  H  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  Q  D  Y  D  S  S  R 
                    Query_1841   181  AAGAACCACTTCTCCCTGAACCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGTGAGACAGGACTATGATAGTAGTAGG  270
V  96.0% (239/249)  IGHV4-31*03  229  ........G...........G...........................................C....---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (14/14)   IGHD3-22*01  6    -------------------------------------------------------------------------..............---  19

                                      ----------------->                                 
                                       G  D  D  K  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1841   271  GGGGACGATAAGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  321
J  95.7% (45/47)    IGHJ6*02     16   ----...G..T........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_49158

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            338     5e-95
IGHD6-6*01                                                                                            12.2    32   
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CAAG	TCGTCC	GAAATCGACA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACAAGTCGTCCGAAATCGACAACTTCTACGGTTTGGACGTC	AKDKSSEIDNFYGLDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  F  G  F  T  F  E  D  Y  A  M  H  W  V  R  Q  G  P  G  K  G  L  
                    Query_1842  1    GGTCCCTGAGACTCTCCTGTGCAGCCTTTGGATTCACGTTTGAAGATTATGCCATGCACTGGGTCCGGCAAGGTCCAGGGAAGGGCCTGG  90
V  93.2% (233/250)  IGHV3-9*01  47   ...........................C.........C.....T............................C.................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  I  S  W  N  G  Y  T  I  A  Y  A  D  S  V  K  G  R  F  T  L  S  R  D  N  A  
                    Query_1842  91   AATGGGTCTCAGGAATTAGTTGGAATGGTTATACCATAGCCTATGCGGACTCTGTGAAGGGCCGATTCACCCTCTCCAGAGACAACGCCA  180
V  93.2% (233/250)  IGHV3-9*01  137  .G...........T............A..GG..G.....G...............................A..................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                     R  N  S  L  Y  L  Q  M  N  S  L  G  A  D  D  T  A  F  Y  Y  C  A  K  D  K  S  S  E  I  D  
                    Query_1842  181  GGAACTCCCTGTATCTGCAAATGAACAGTCTGGGAGCTGACGACACGGCCTTCTATTATTGTGCAAAAGACAAGTCGTCCGAAATCGACA  270
V  93.2% (233/250)  IGHV3-9*01  227  A...............................A.......G...........G.....C...........--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD6-6*01  13   --------------------------------------------------------------------------......----------  18

                                     T------------------>                                 
                                     N  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1842  271  ACTTCTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.2% (51/53)    IGHJ6*02    10   ...A.......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_49157

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           344     6e-97
IGHD2-21*01                                                                                           10.3    122  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TGTCCAAGAAGGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTGTCCAAGAAGGAGTCTACTACTTTGACTAC	ARSSLFVQEGVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  I  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  N 
                    Query_1843   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCATCATCAGGAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGAAC  90
V  94.4% (234/248)  IGHV4-31*03  49   ...............................G.TC......C....................C........................GG.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1843   91   CTGGAGTGGATTGGGTACATCTATTATAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCT  180
V  94.4% (234/248)  IGHV4-31*03  139  ..........................C.......G.............C......................C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  V  Q  E 
                    Query_1843   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGGTCTTCTCTATTTGTCCAAGAA  270
V  94.4% (234/248)  IGHV4-31*03  229  ..........................C.............................T...........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD2-21*01  22   ---------------------------------------------------------------------------.....----------  26

                                      GT------------------>                                  
                                       G  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1843   271  GGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_49156

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           283     1e-78
IGHD6-19*01                                                                                           12.2    31   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GGCTGG	AGGCAGCGC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCTGGAGGCAGCGCCTATTATTATGGTTTGGACGTC	ARAGGSAYYYGLDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	211	30	0	87.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  S  G  G  S  I  R  S  G  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_1844   4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCAGAAGTGGCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  87.6% (211/241)  IGHV4-59*08  50   .....TCC...A.....A......................T...TA......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  F  Y  N  G  G  S  T  D  Y  N  P  S  L  R  S  R  V  T  I  S  A  D  T  S  K  K  
                    Query_1844   94   GGATTGGATACTTCTATAATGGGGGGAGCACCGATTACAATCCCTCCCTCAGGAGTCGAGTCACCATCTCAGCAGACACGTCCAAGAAGC  183
V  87.6% (211/241)  IGHV4-59*08  140  .......G..TA.....T.CA.T.........A.C.....C..........A...............A....T...............C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  L  S  L  T  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  G  S  A  Y  Y  Y  G  
                    Query_1844   184  AACTCTCCCTGACGGTGACCTCTGTGACCGCCGCAGACACGGCCGTTTACTACTGTGCGAGGGCTGGAGGCAGCGCCTATTATTATGGTT  273
V  87.6% (211/241)  IGHV4-59*08  230  .GT.........A.C...G...........................G..T...........-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (6/6)     IGHD6-19*01  13   -------------------------------------------------------------......-----------------------  18
J  90.9% (50/55)    IGHJ6*02     8    ----------------------------------------------------------------------------...C..C..C...A  21

                                      ------->                                 
                                      L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1844   274  TGGACGTCTGGGGCCAAGGGACCACGGTCACTGTCTCCTCA  314
J  90.9% (50/55)    IGHJ6*02     22   ...............................C.........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_140525

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           304     1e-84
IGHD2-8*02                                                                                            16.1    2.2  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGCATCGCAGAA	GGTGGTGT	GAAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGCATCGCAGAAGGTGGTGTGAATTGGTTCGACCCC	AKDGIAEGGVNWFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  Q  F  S  F  Y  A  M  N  W  I  R  Q  A  P  G  K  G  L  
                    Query_1845   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCAGTTTAGTTTCTATGCCATGAACTGGATCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  88.8% (222/250)  IGHV3-23*01  47   ...................................ACC.....CAG...........G....G..........................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  G  I  S  G  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  N  I  T  R  D  N  S  
                    Query_1845   91   AGTGGGTCTCAGGCATTAGTGGAAGTGGTGGTACCACTTACTACGCAGACTCCGTGAAGGGCCGCTTCAACATTACCAGAGACAATTCTG  180
V  88.8% (222/250)  IGHV3-23*01  137  ............CT........T..........G...A..........................G....C...CT.............CA  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      G  N  T  V  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  D  G  I  A  E  G  G  
                    Query_1845   181  GGAACACGGTGTTTCTTCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTGTACTATTGTGCGAAAGATGGCATCGCAGAAGGTGGTG  270
V  88.8% (222/250)  IGHV3-23*01  227  A.......C...A...G...................C...............A..T..C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD2-8*02   14   -----------------------------------------------------------------------------------.......  20

                                      ---------------->                                  
                                      V  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1845   271  TGAATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  321
D  100.0% (8/8)     IGHD2-8*02   21   .--------------------------------------------------  21
J  97.8% (45/46)    IGHJ5*02     6    -----.........................................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_49154

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           263     2e-72
IGHD3-3*01                                                                                            19.9    0.16 
IGHJ2*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGCATCG	CGACTTTTGGCGTGGT	CAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGCATCGCGACTTTTGGCGTGGTCACCTACTGGTACTTCGATCTC	AREGIATFGVVTYWYFDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	93	21	0	81.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	209	41	0	83.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  P  Q  F  T  F  S  K  Y  R  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1846   1    GGTCCCTGAGACTCTCCTGTGTAGGCCCTCAATTCACATTTAGTAAATATAGAATGAACTGGGTCCGCCAGGCTCCTGGGAAGGGGCTGG  90
V  83.6% (209/250)  IGHV3-21*01  47   .....................C..C.T..GG......C..C....GC.....C.......................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  L  S  S  S  G  A  H  I  F  Y  S  D  S  M  R  G  R  V  T  I  S  R  D  N  A  
                    Query_1846   91   AGTGGGTCTCCTCTCTTAGTAGTAGTGGAGCTCACATTTTCTACTCAGACTCAATGAGGGGCCGAGTCACAATCTCCAGAGACAACGCCA  180
V  83.6% (209/250)  IGHV3-21*01  137  ..........A..CA...........A.TAG.T....A.A....G........G...A.......T....C...................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  N  I  L  F  L  Q  M  D  N  L  R  V  E  D  T  A  I  Y  Y  C  A  R  E  G  I  A  T  F  G  
                    Query_1846   181  GGAATATTTTGTTTTTGCAAATGGACAACCTGAGAGTCGAAGACACGGCTATTTACTACTGTGCGAGAGAGGGCATCGCGACTTTTGGCG  270
V  83.6% (209/250)  IGHV3-21*01  227  A...CTCAC...A.C........A...G........C...G.........G.G..T..............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD3-3*01   7    ------------------------------------------------------------------------------...T......A.  18

                                      IMGT--------------------->                                  
                                      V  V  T  Y  W  Y  F  D  L  W  G  R  G  T  V  V  S  V  S  S  
                    Query_1846   271  TGGTCACCTACTGGTACTTCGATCTCTGGGGCCGTGGCACCGTGGTCAGTGTCTCCTCAG  330
D  87.5% (14/16)    IGHD3-3*01   19   ....--------------------------------------------------------  22
J  96.2% (51/53)    IGHJ2*01     1    -------..................................C......C...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_49153

Length=417
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           439     2e-125
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGCCTACTTTCTTAGTTGGGGTTACTCTGGTA	GTATAACAGCAGCTGG	CGAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTAC	ARHAYFLSWGYSGSITAAGEIDY	291	359	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	72	2	0	97.3
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	113	1	0	99.1
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	295	288	7	0	97.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  A  
                    Query_1847   4    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTGCCA  93
V  97.6% (288/295)  IGHV5-51*01  2    ....G...................................C........................................G....A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  
                    Query_1847   94   CCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACA  183
V  97.6% (288/295)  IGHV5-51*01  92   G...............................................................................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  
                    Query_1847   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACA  273
V  97.6% (288/295)  IGHV5-51*01  182  .............................................................................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------------CDR3-IMGT----------------------------->    
                                      T  A  M  Y  Y  C  A  R  H  A  Y  F  L  S  W  G  Y  S  G  S  I  T  A  A  G  E  I  D  Y  W  
                    Query_1847   274  CCGCCATGTATTACTGTGCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTACTGGG  363
V  97.6% (288/295)  IGHV5-51*01  272  .........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  93.8% (15/16)    IGHD6-13*01  3    ---------------------------------------------------------.....G..........-----------------  18
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------------------------------------............  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_1847   364  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  393
J  100.0% (42/42)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40919688


Query= Query_49152

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           402     3e-114
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGTGGTGT	CAGCAGCTGGTAC	GGGCCGGCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTGGTGTCAGCAGCTGGTACGGGCCGGCCGACTAC	ARGGGVSSWYGPADY	281	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	166	21	19	2	0	90.5
FR3-IMGT	167	280	114	106	8	0	93
CDR3-IMGT (germline)	281	287	7	7	0	0	100
Total	N/A	N/A	287	272	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  L  T  V  T  R  N
                    Query_1848   1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCGGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGCTCACCGTCACTAGGAA  90
V  94.8% (272/287)  IGHV3-53*01  6    ..........G.........................T....................................T.........G...C..  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  T  G  G  S  T  Y  Y  S  D  S
                    Query_1848   91   CTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTTATACCGGTGGAAGCACATACTATTCAGACTC  180
V  94.8% (272/287)  IGHV3-53*01  96   ..............................................................G......T...........CG.......  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  S  S  K  N  T  L  L  L  Q  M  N  S  L  R  A  E  D  T  A  V
                    Query_1848   181  CGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGAACACACTACTTCTTCAGATGAACAGCCTGAGAGCCGAGGACACGGCCGT  270
V  94.8% (272/287)  IGHV3-53*01  186  ................................A............G..GTA......A................................  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><-----------------CDR3-IMGT----------------->                                  
                                        Y  Y  C  A  R  G  G  G  V  S  S  W  Y  G  P  A  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1848   271  GTATTACTGTGCGAGAGGGGGTGGTGTCAGCAGCTGGTACGGGCCGGCCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  94.8% (272/287)  IGHV3-53*01  276  .................------------------------------------------------------------------------  292
                                        Y  Y  C  A  R                                                                          
D  100.0% (13/13)   IGHD6-13*01  9    ---------------------------.............-------------------------------------------------  21
J  100.0% (40/40)   IGHJ4*02     9    -------------------------------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_49151

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           210     1e-56
IGHD1-1*01                                                                                            12.2    34   
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTAGAGGGGGCTTCGGGACACGGT	TACAAC	GGACGGCGGGGGATTC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTAGAGGGGGCTTCGGGACACGGTTACAACGGACGGCGGGGGATTCTGGACGTC	ARVEGASGHGYNGRRGILDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	21	9	0	70
FR2-IMGT	58	108	51	42	9	0	82.4
CDR2-IMGT	109	129	21	11	10	0	52.4
FR3-IMGT	130	243	114	85	29	0	74.6
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	191	57	0	77


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  Y  S  Y  N  D  Y  W  A  W  V  R  Q  S  P  G  K  G 
                    Query_1849   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCTACAGTTATAATGATTATTGGGCCTGGGTCCGTCAGTCCCCGGGGAAGGGC  90
V  77.0% (191/248)  IGHV4-39*01  49   ...............................G.......AG....AG..G.T.C..C....G....A....C...C....A........G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  T  G  T  Y  H  S  R  G  S  S  S  Y  N  P  S  F  G  G  R  V  S  I  S  L  G  P  S 
                    Query_1849   91   CTGGAGTGGACTGGGACCTATCACTCTCGTGGCAGTTCCTCCTACAACCCATCTTTCGGGGGTCGAGTCTCTATTTCTCTAGGCCCGTCC  180
V  77.0% (191/248)  IGHV4-39*01  139  ..........T.....GTATCT.T.A.A....G..CA...A.........G..CC..AA.A........A.C..A..CG...A.A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       S  N  Q  I  S  L  Q  L  S  S  V  T  A  T  D  T  S  V  Y  F  C  A  R  V  E  G  A  S  G  H 
                    Query_1849   181  AGCAATCAAATCTCCCTGCAACTAAGTTCAGTGACCGCCACAGACACTTCTGTTTATTTCTGTGCGAGGGTAGAGGGGGCTTCGGGACAC  270
V  77.0% (191/248)  IGHV4-39*01  229  .AG..C..GT........A.G..G..C..T.........G.......GG....G....A.........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      DR3-IMGT------------------------>                                 
                                       G  Y  N  G  R  R  G  I  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1849   271  GGTTACAACGGACGGCGGGGGATTCTGGACGTCTGGGGCCAGGGGACCACTGTCACCGTCTCCTCA  336
D  100.0% (6/6)     IGHD1-1*01   3    ---......---------------------------------------------------------  8
J  95.1% (39/41)    IGHJ6*02     22   -------------------------................A........G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_140520

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           406     1e-115
IGHD3-3*01                                                                                            23.8    0.012 
IGHJ5*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	ACTCTCC	TTTTGGAGTGGT	GATCCCA	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACTCTCCTTTTGGAGTGGTGATCCCAAACTGGTTCGACCCC	ANSPFGVVIPNWFDP	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	292	4	4	0	0	100
Total	N/A	N/A	292	276	16	0	94.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  Y  G  G  T  F  S 
                    Query_1850   1    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTATGGAGGCACCTTCAGC  90
V  94.5% (276/292)  IGHV1-69*12  1    ...........G...........G.................................................C................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  A  Y  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  R  A  H  Y 
                    Query_1850   91   AGCTATGCCTACAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATATTTGGTAGAGCACACTAC  180
V  94.5% (276/292)  IGHV1-69*12  91   ........TAT..G.........................................................C.......C....A.....  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  R  F  Q  G  R  V  T  I  T  A  D  E  S  T  G  T  A  Y  M  D  L  S  G  L  I  S  E  D 
                    Query_1850   181  GCACAGAGGTTCCAGGGCAGAGTCACGATAACCGCGGACGAATCCACGGGCACAGCCTACATGGACCTGAGCGGCCTGATATCTGAGGAC  270
V  94.5% (276/292)  IGHV1-69*12  181  .......A.....................T..................A................G......A......G..........  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  N  S  P  F  G  V  V  I  P  N  W  F  D  P  W  G  Q  G  T  L  V  T  V 
                    Query_1850   271  ACGGCCGTGTATTACTGTGCGAACTCTCCTTTTGGAGTGGTGATCCCAAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTC  360
V  94.5% (276/292)  IGHV1-69*12  271  ......................--------------------------------------------------------------------  292
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (12/12)   IGHD3-3*01   11   -----------------------------............-------------------------------------------------  22
J  100.0% (47/47)   IGHJ5*02     3    ------------------------------------------------..........................................  44

                                           
                                       S  S
                    Query_1850   361  TCCTC  365
J  100.0% (47/47)   IGHJ5*02     45   .....  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_277065

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           338     5e-95
IGHD3-10*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGGTTCGAGCAGTTATT	CCTTCGCGCG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTTCGAGCAGTTATTCCTTCGCGCGCTACGGTATGGACGTC	ARDGSSSYSFARYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1851   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACTTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-48*03  47   ....................G................C....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  G  G  G  R  T  I  Y  Y  A  D  S  V  K  G  R  F  T  L  S  R  D  N  T  
                    Query_1851   91   AGTGGGTTTCATACATTAGTGGCGGTGGAAGAACCATTTACTACGCAGACTCTGTGAAGGGCCGATTCACCTTGTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-48*03  137  ....................A.TA....T..T.....A.................................A.C............G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  T  A  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  S  S  Y  S  
                    Query_1851   181  AGACCGCTCTGCATCTACAAATGAACAGCCTGAGAGCCGAAGACACGGCTGTTTATTACTGTGCGAGAGATGGTTCGAGCAGTTATTCCT  270
V  93.2% (233/250)  IGHV3-48*03  227  ...A.T.A...T....G.......................G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.2% (15/17)    IGHD3-10*01  10   ----------------------------------------------------------------------.......G.G.......---  26

                                      GT-------------------->                                 
                                      F  A  R  Y  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_1851   271  TCGCGCGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  326
J  98.0% (48/49)    IGHJ6*02     14   -------......................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_277064

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         402     3e-114
IGHD5-12*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCCCAG	TAGTGGCCACG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCCCAGTAGTGGCCACGACTACTTTGACTAC	ARLPSSGHDYFDY	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	77	72	70	2	0	97.2
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	106	8	0	93
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	291	274	17	0	94.2


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  R  I  S  C  E  G  S  G  Y  T  F  A  T 
                    Query_1852     6    GTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGCAGTCTCTGAGGATCTCCTGTGAGGGTTCTGGATACACCTTCGCCACC  95
V  94.2% (274/291)  IGHV5-10-1*01  4    ..........................................G....................A...............G...TA...G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  K  I  D  P  S  D  S  Y  T  N  Y  S 
                    Query_1852     96   TATTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAAGATTGATCCTAGTGACTCTTATACCAACTACAGC  185
V  94.2% (274/291)  IGHV5-10-1*01  94   ..C..................................................G.G..................................  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  Q  G  H  V  T  I  S  T  D  N  S  I  T  T  A  Y  L  Q  W  N  S  L  K  A  S  D  T 
                    Query_1852     186  CCGTCCTTCCAAGGCCACGTCACCATCTCAACTGACAATTCCATCACCACTGCCTACCTGCAGTGGAACAGTCTGAAGGCCTCGGACACA  275
V  94.2% (274/291)  IGHV5-10-1*01  184  ..............................G.......G.......G....................G...C.................C  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><--------------CDR3-IMGT-------------->                                  
                                         A  M  Y  Y  C  A  R  L  P  S  S  G  H  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1852     276  GCCATGTATTATTGCGCGAGACTTCCCAGTAGTGGCCACGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  363
V  94.2% (274/291)  IGHV5-10-1*01  274  ...........C..T......-------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                    
D  90.9% (10/11)    IGHD5-12*01    8    -----------------------------.......T...------------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02       1    ----------------------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_277067

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           288     4e-80
IGHD2-2*01                                                                                            12.2    30   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACATTGACTTC	ARVSTSAYYIDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	214	30	0	87.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_1853   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGACAACCCCCAGGAAAGGGACTGGAG  90
V  87.7% (214/244)  IGHV4-59*01  49   .................................T........A.....T.C.........A....G..G........G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  S  F  D  T  S  K  R 
                    Query_1853   91   TGGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGTCCTTTGACACGTCCAAGAGG  180
V  87.7% (214/244)  IGHV4-59*01  139  .......GGT....C...........G.G..C...C................A..G............A..AG.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  Y  Y  I  D 
                    Query_1853   181  CAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATACTACATTGAC  270
V  87.7% (214/244)  IGHV4-59*01  229  .............A....AGC..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-2*01   17   ---------------------------------------------------------------------......---------------  22
J  89.1% (41/46)    IGHJ4*02     1    -------------------------------------------------------------------------------.....T.....  11

                                      -->                                
                                       F  W  G  R  G  T  L  V  V  V  S  S
                    Query_1853   271  TTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  305
J  89.1% (41/46)    IGHJ4*02     12   .A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_277061

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD1-26*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TTCCCTTCATC	AGTGGGAGC	CGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTCCCTTCATCAGTGGGAGCCGCGACTAC	AKLPFISGSRDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1854   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTCCTACTGGAGTTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  92.2% (225/244)  IGHV4-59*08  49   ...........................................G..A.........C.................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_1854   91   TGGATCGGATATATCTATTCTAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGCGTCACCATCTCGGTAGACACGTCCAAGAAG  180
V  92.2% (225/244)  IGHV4-59*08  139  .....T..G..........AC..............C.......................A........A..A.................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  K  L  P  F  I  S  G  S  R  D 
                    Query_1854   181  CAGTTCTCCCTGAAACTGAATTCTGTGACCGCCGCAGACTCGGCCGTCTATTACTGTGCGAAACTTCCCTTCATCAGTGGGAGCCGCGAC  270
V  92.2% (225/244)  IGHV4-59*08  229  ..............G....GC..................A.......G.............G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD1-26*01  6    ---------------------------------------------------------------------------.........------  14
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_1854   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   ..............................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_277060

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            316     2e-88
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGCAGCCTTA	GACTACGGTG	CTAAGAGGCTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCGCAGCCTTAGACTACGGTGCTAAGAGGCTTTTTGACTAC	VRGAALDYGAKRLFDY	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	23	1	0	95.8
FR2-IMGT	51	101	51	50	1	0	98
CDR2-IMGT	102	125	24	19	5	0	79.2
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	232	217	15	0	93.5


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 
                    Query_1855   15   TGTGCAGCCTCTGGATTCACCTTTAGTAGCTTTTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATA  104
V  93.5% (217/232)  IGHV3-7*03   64   ...............................A.........C................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       K  Q  A  G  S  D  E  S  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  R  N  S  L  Y  L 
                    Query_1855   105  AAGCAAGCTGGCAGTGACGAGTCCTATGTGGACTCTGTGAGGGGCCGCTTCACCATCTCCAGAGACAACGCCAGGAACTCACTGTATCTC  194
V  93.5% (217/232)  IGHV3-7*03   154  .......A...A.....GA.A.A.................A......A.........................A...............G  243
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  V  R  G  A  A  L  D  Y  G  A  K  R  L  F  D 
                    Query_1855   195  CAAATGAACACCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGTGAGAGGCGCAGCCTTAGACTACGGTGCTAAGAGGCTTTTTGAC  284
V  93.5% (217/232)  IGHV3-7*03   244  ..........G........................G..........C.....--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (10/10)   IGHD4-17*01  2    ---------------------------------------------------------------..........-----------------  11
J  100.0% (43/43)   IGHJ4*02     6    ------------------------------------------------------------------------------------......  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1855   285  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (43/43)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_277063

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_1856   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_1856   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_1856   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_1856   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_277062

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           352     3e-99
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCATAGGGGTG	ATTACGATTTTTGGAGGGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCATAGGGGTGATTACGATTTTTGGAGGGGTTATTGACTACTTCGACTAC	ARSIGVITIFGGVIDYFDY	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	234	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1857   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (234/243)  IGHV4-59*08  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  S  T  K  Y  N  P  S  L  Q  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_1857   91   TGGATTGGTTATGTGTATTACAGTGGGAGCACCAAGTATAACCCCTCGCTCCAGAGTCGAGTCACCATATCACTAGACACCTCCAAGAAC  180
V  96.3% (234/243)  IGHV4-59*08  139  ........G...A.C....................C..C........C...A....................G.......G.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  I  G  V  I  T  I  F  G 
                    Query_1857   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGATCCATAGGGGTGATTACGATTTTTGGA  270
V  96.3% (234/243)  IGHV4-59*08  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.8% (23/24)    IGHD3-3*01   3    ---------------------------------------------------------------------------...............  17

                                      ----------------------->                                  
                                       G  V  I  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1857   271  GGGGTTATTGACTACTTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.8% (23/24)    IGHD3-3*01   18   .T.......-------------------------------------------------  26
J  97.9% (47/48)    IGHJ4*02     1    ----------.......T........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_170802

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           311     4e-87
IGHD3-10*01                                                                                           16.1    2.0  
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	TCGGAGA	TCGGGGAG	N/A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCATCGGAGATCGGGGAGGATGCTTTTGATATC	ASEIGEDAFDI	230	262	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	21	3	0	87.5
FR3-IMGT	116	229	114	110	4	0	96.5
CDR3-IMGT (germline)	230	232	3	3	0	0	100
Total	N/A	N/A	219	209	10	0	95.4


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  V  T  L  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  N  S  D 
                    Query_1858   14   TCTGGAGTCACCCTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGCATTAACAGTGAT  103
V  95.4% (209/219)  IGHV3-74*01  73   ......T.....T................................................................T.....T......  162
                                       S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  N  S  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  S  R  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N 
                    Query_1858   104  GGGAGTAGAATAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTTCAAATGAAC  193
V  95.4% (209/219)  IGHV3-74*01  163  ........C.C..G..................................................................G.........  252
                                       G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><-----------CDR3-IMGT----------->                     
                                       S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  E  I  G  E  D  A  F  D  I  W  G  Q  G  T  M  V 
                    Query_1858   194  AGTCTGAGAGTCGAAGACACGGCTGTGTATTACTGTGCATCGGAGATCGGGGAGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTC  283
V  95.4% (209/219)  IGHV3-74*01  253  ..........C...G........................---------------------------------------------------  291
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                    
D  100.0% (8/8)     IGHD3-10*01  14   ----------------------------------------------........------------------------------------  21
J  98.0% (48/49)    IGHJ3*02     2    ------------------------------------------------------....................................  37

                                                   
                                       T  V  S  S  
                    Query_1858   284  ACCGTCTCATCAG  296
J  98.0% (48/49)    IGHJ3*02     38   ........T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_277068

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGCCATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGCCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_1859   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAAAGACTGGAG  90
V  98.4% (239/243)  IGHV4-59*01  49   .........................................T......................................GG........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1859   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  ....................................................A.....................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D 
                    Query_1859   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGCCATGGTTACGGAGGAGTTGAC  270
V  98.4% (239/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD5-18*01  6    ---------------------------------------------------------------......T........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1859   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_13258

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD1-26*01                                                                                           27.6    9e-04 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	270	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  T  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  N  Y
                    Query_1860   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGACAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAATTA  90
V  92.8% (270/291)  IGHV5-51*01  6    .............................A...................................G....................GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  V  G  I  M  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_1860   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGGTGGGGATCATGTATCCTGGTGACTCTGATACCAGATATAGCCC  180
V  92.8% (270/291)  IGHV5-51*01  96   ........G.....................................A..........C..........................C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  R  S  R  G  A  P  D  T  A
                    Query_1860   181  GTCTTTCGAGGGCCACGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTATTTGCAGTGGAGGAGCCGGGGGGCCCCGGACACCGC  270
V  92.8% (270/291)  IGHV5-51*01  186  ...C...C.A.....G......................................CC..........C....T.AA....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  F  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  P  G  T  T  V
                    Query_1860   271  CATATATTTCTGTGCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTCTGGGGCCCGGGGACCACGGT  360
V  92.8% (270/291)  IGHV5-51*01  276  ...G....A............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (14/14)   IGHD1-26*01  4    -----------------------------..............-----------------------------------------------  17
J  93.0% (53/57)    IGHJ6*02     6    ----------------------------------------------.......A......T................AA...........  49

                                                   
                                        T  V  S  S 
                    Query_1860   361  CACCGTCTCCTCA  373
J  93.0% (53/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_339859

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           325     3e-91
IGHD3-22*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	230	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	24	0	0	100
FR3-IMGT	116	229	114	110	4	0	96.5
CDR3-IMGT (germline)	230	234	5	5	0	0	100
Total	N/A	N/A	222	215	7	0	96.8


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_1861   13   GTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  96.8% (215/222)  IGHV3-33*01  72   ...................AG..A..................................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N
                    Query_1861   103  TGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACGTTGTATCTGCAAATGAA  192
V  96.8% (215/222)  IGHV3-33*01  162  .............................................................T...........C................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------------------CDR3-IMGT---------------------
                                        S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  T  T  G  R  D  P  F  D  I
                    Query_1861   193  CAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGGGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATAT  282
V  96.8% (215/222)  IGHV3-33*01  252  .......A...................G..............------------------------------------------------  293
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                   
D  88.9% (16/18)    IGHD3-22*01  5    -------------------------------------------------------..........G..G....-----------------  22
J  94.0% (47/50)    IGHJ3*02     1    ---------------------------------------------------------------------------....G..........  15

                                      >                                  
                                        W  G  Q  G  T  I  L  T  V  S  S  
                    Query_1861   283  CTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  317
J  94.0% (47/50)    IGHJ3*02     16   ..................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_339855

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           347     7e-98
IGHD1-26*01                                                                                           10.3    118  
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TAGTG	CGTCCGCTCGAGTTTTA	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATAGTGCGTCCGCTCGAGTTTTAGACGTC	ARDSASARVLDV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  D  A  S  G  F  T  F  S  S  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1862   1    GGTCCCTGAGACTCTCCTGTGACGCCTCTGGATTCACCTTTAGTAGCCACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-74*01  47   .....................CA.................C......T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  S  T  D  G  S  R  T  T  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  T  
                    Query_1862   91   TGTGGGTCTCACGTATTAGTACTGATGGGAGTCGCACAACCTACGTGGACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  94.4% (236/250)  IGHV3-74*01  137  ..................A..G..........A......G.....C..........A.............................G...  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  A  S  A  R  V  
                    Query_1862   181  AGAACACACTGTATCTGCAATTGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGAGATAGTGCGTCCGCTCGAGTTT  270
V  94.4% (236/250)  IGHV3-74*01  227  .......G............A...............................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  5    ----------------------------------------------------------------------.....---------------  9

                                      ------->                                 
                                      L  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_1862   271  TAGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  311
J  97.4% (38/39)    IGHJ6*02     24   --............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_339857

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTC	ARHGDDSGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	283	8	0	97.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_1863   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCACCTA  90
V  97.3% (283/291)  IGHV5-51*01  6    ..............................A...................A...................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  T  R  Y  S  P
                    Query_1863   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  97.3% (283/291)  IGHV5-51*01  96   ........G.................................................T...............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1863   181  GTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.3% (283/291)  IGHV5-51*01  186  .......C...................A.C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  D  S  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_1863   271  CATGTATTACTGTGCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  97.3% (283/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------........A.....-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------.......AC.....T.............................  49

                                                   
                                        T  V  S  S 
                    Query_1863   361  CACCGTCTCCTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_108365

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           288     5e-80
IGHD2-8*02                                                                                            19.9    0.16 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGATGCGGCGGAGCGAAATCA	GTACTGGTGG	GG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATGCGGCGGAGCGAAATCAGTACTGGTGGGGACTACTTTGACCGC	ARMRRSEISTGGDYFDR	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  V  P  Y  L  W  S  W  V  R  Q  H  P  V  K  G 
                    Query_1864   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATAAGAAGTGTTCCTTACCTCTGGAGCTGGGTCCGCCAGCACCCAGTGAAGGGC  90
V  87.4% (215/246)  IGHV4-31*03  49   ......................................C..C....G.GG....TA..........A...............G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  Y  M  Y  Y  S  G  S  N  R  Y  N  P  S  L  K  S  R  V  S  M  S  L  D  T  S 
                    Query_1864   91   CTGGAGTGGATTGCATACATGTACTACAGTGGGAGTAATCGCTACAACCCGTCCCTCAAGAGTCGAGTTTCCATGTCGCTAGACACGTCT  180
V  87.4% (215/246)  IGHV4-31*03  139  .............GG.....C..T...........C.CCTA............................A....A..AG...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       R  N  Q  F  S  L  R  L  T  S  M  T  A  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  I  S 
                    Query_1864   181  AGGAACCAGTTCTCCCTAAGGCTGACCTCTATGACGGCCGCGGACACGGCCATCTACTACTGTGCGCGGATGCGGCGGAGCGAAATCAGT  270
V  87.4% (215/246)  IGHV4-31*03  229  .A...............G.A.....G....G....T...............G.G..T.........------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (10/10)   IGHD2-8*02   9    ----------------------------------------------------------------------------------------..  10

                                      MGT-------------------->                                  
                                       T  G  G  D  Y  F  D  R  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_1864   271  ACTGGTGGGGACTACTTTGACCGCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  328
D  100.0% (10/10)   IGHD2-8*02   11   ........--------------------------------------------------  18
J  91.7% (44/48)    IGHJ4*02     1    ----------...........TA.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_339851

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           350     9e-99
IGHD2-15*01                                                                                           14.1    9.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	ACCCGTTTTGTCT	TGGCGGTAGATGC	ATCTCGGGCTTGAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACCCGTTTTGTCTTGGCGGTAGATGCATCTCGGGCTTGAGTGACTTC	ARDPFCLGGRCISGLSDF	260	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	49	45	41	4	0	91.1
CDR1-IMGT	50	73	24	22	2	0	91.7
FR2-IMGT	74	124	51	49	2	0	96.1
CDR2-IMGT	125	145	21	18	3	0	85.7
FR3-IMGT	146	259	114	107	7	0	93.9
CDR3-IMGT (germline)	260	266	7	6	1	0	85.7
Total	N/A	N/A	262	243	19	0	92.7


Alignments

                                      <-----------------FR1-IMGT------------------><-------CDR1-IMGT------><--------------------
                                       L  V  Q  P  S  E  T  L  S  L  T  C  A  V  S  G  G  P  F  S  G  H  Y  W  N  W  I  R  Q  S 
                    Query_1865   5    CTGGTGCAGCCCTCGGAGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGCCCTTCAGTGGTCACTACTGGAACTGGATCCGCCAGTCC  94
V  92.7% (243/262)  IGHV4-34*01  31   ...T..A....T...............................A.......T...........T.........G.............C..  120
                                       L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P 

                                      FR2-IMGT---------------------><-----CDR2-IMGT-----><--------------------------------------
                                       P  G  K  G  L  E  W  I  G  E  I  N  R  G  G  S  T  T  Y  N  P  S  L  K  S  R  V  T  M  S 
                    Query_1865   95   CCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCGTGGCGGAAGCACCACCTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCT  184
V  92.7% (243/262)  IGHV4-34*01  121  .....................................A.A.T..........A.................................A..A  210
                                       P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S 

                                      --------------FR3-IMGT----------------------------------------------------><--------------
                                       V  D  T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  F 
                    Query_1865   185  GTAGACACGTCCAAGAACCAATTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGCGAGACCCGTTT  274
V  92.7% (243/262)  IGHV4-34*01  211  ....................G...........G....G...........................G............A...--------  292
                                       V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R          

                                      --------CDR3-IMGT--------------------->                                  
                                       C  L  G  G  R  C  I  S  G  L  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1865   275  TGTCTTGGCGGTAGATGCATCTCGGGCTTGAGTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  347
D  84.6% (11/13)    IGHD2-15*01  13   -----...T.....C...-------------------------------------------------------  25
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_339850

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           442     2e-126
IGHD3-3*01                                                                                            41.1    8e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACGCCT	CGATTTTTGGAGTGGTTATTGTAC	GAGAATCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTAC	ARYASIFGVVIVRESFDY	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	286	3	0	99


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_1866   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  99.0% (286/289)  IGHV5-51*01  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  G  T  R  Y  S  P
                    Query_1866   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGGTACTAGATACAGCCC  180
V  99.0% (286/289)  IGHV5-51*01  96   ............................................................T.............A...C...........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1866   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  99.0% (286/289)  IGHV5-51*01  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  Y  A  S  I  F  G  V  V  I  V  R  E  S  F  D  Y  W  G  Q  G  T  L  V  T
                    Query_1866   271  CATGTATTACTGTGCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTACTGGGGCCAGGGAACCCTGGTCAC  360
V  99.0% (286/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  95.8% (23/24)    IGHD3-3*01   7    --------------------------....................A...----------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    ----------------------------------------------------------................................  37

                                                 
                                        V  S  S  
                    Query_1866   361  CGTCTCCTCAG  371
J  100.0% (43/43)   IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_339853

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           413     2e-117
IGHD3-22*01                                                                                           33.4    2e-05 
IGHJ3*01                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATACTTAGGGATCCC	TATTACTCTGATAGTAGTGG	CTCGCCCC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATACTTAGGGATCCCTATTACTCTGATAGTAGTGGCTCGCCCCATGCTTTTGATTTC	ARILRDPYYSDSSGSPHAFDF	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	276	12	0	95.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  T  S  V  K  V  S  C  K  V  S  G  Y  T  F  T  N  Y 
                    Query_1867   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGACCTCAGTGAAAGTCTCCTGCAAGGTTTCTGGTTACACCTTTACCAACTAC  91
V  95.8% (276/288)  IGHV1-18*04  7    .......................................G..........G.............C....................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  N  T  K  Y  A  Q 
                    Query_1867   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAAAATATGCACAG  181
V  95.8% (276/288)  IGHV1-18*04  97   ............................................................G...................C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  V  T  T  D  T  S  T  G  T  A  Y  M  E  L  R  T  L  K  S  D  D  T  A 
                    Query_1867   182  AAACTCCAGGGCAGAGTCACCGTGACCACAGACACATCCACGGGCACAGCCTACATGGAGCTGAGGACCTTGAAATCTGACGACACGGCC  271
V  95.8% (276/288)  IGHV1-18*04  187  ..G..................A....................A........................G.C...G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------------CDR3-IMGT-------------------------->               
                                       V  Y  Y  C  A  R  I  L  R  D  P  Y  Y  S  D  S  S  G  S  P  H  A  F  D  F  W  G  Q  G  T 
                    Query_1867   272  GTGTATTACTGTGCGAGAATACTTAGGGATCCCTATTACTCTGATAGTAGTGGCTCGCCCCATGCTTTTGATTTCTGGGGCCAAGGGACA  361
V  95.8% (276/288)  IGHV1-18*04  277  ..................------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  95.0% (19/20)    IGHD3-22*01  2    ---------------------------------.......A............-------------------------------------  21
J  95.8% (46/48)    IGHJ3*01     3    -------------------------------------------------------------...........G.................  31

                                                         
                                       T  V  T  V  S  S  
                    Query_1867   362  ACGGTCACCGTCTCTTCAG  380
J  95.8% (46/48)    IGHJ3*01     32   .T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_339852

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           322     2e-90
IGHD1-26*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGC	ATAGTGGGAGCTACT	TGT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGCATAGTGGGAGCTACTTGTACTTCTTTGACTAC	ARLHSGSYLYFFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  T  S  G  F  T  V  I  N  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1868   1    GGTCCCTGAGACTCTCCTGTTCGACCTCTGGATTCACCGTCATTAATAATTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.2% (225/244)  IGHV3-53*01  47   ....................G.AG.......G..........G..GC..C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  Y  T  N  G  R  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_1868   91   AGTGGGTCTCAGCCATTTATACCAATGGTCGCACATTCTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGA  180
V  92.2% (225/244)  IGHV3-53*01  137  ............TT.......G.GG....A......A........................A............................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  E  M  N  S  L  R  A  A  D  T  A  V  Y  Y  C  A  R  L  H  S  G  S  Y  L  Y  
                    Query_1868   181  ACACGCTGTATCTTGAAATGAACAGCCTGAGAGCCGCGGACACGGCCGTGTATTATTGTGCGAGGCTGCATAGTGGGAGCTACTTGTACT  270
V  92.2% (225/244)  IGHV3-53*01  227  ..............C.....................A..................C........--------------------------  290
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  100.0% (15/15)   IGHD1-26*01  4    ---------------------------------------------------------------------...............------  18
J  93.8% (45/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      F  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_1868   271  TCTTTGACTACTGGGGCCAGGGGGCCCTGGTCACCGTCTCCTCAG  315
J  93.8% (45/48)    IGHJ4*02     4    A.....................AA.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_56119

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           336     1e-94
IGHD3-10*01                                                                                           10.3    117  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  C  Q  P  P  G  K  G  L  
                    Query_1869   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCTGCCAGCCTCCAGGGAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-21*01  47   ............................................AG.....G....A........C.....G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  E  Y  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_1869   91   AGTGGGTCTCATCCATTAGTAGTACTAGTGAATACATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  93.2% (232/249)  IGHV3-21*01  137  ........................G....AGT........C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_1869   181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTT  270
V  93.2% (232/249)  IGHV3-21*01  227  ............A......A..............................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1869   271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_69837

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            400     8e-114
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	269	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	76	30	25	5	0	83.3
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	154	27	27	0	0	100
FR3-IMGT	155	268	114	113	1	0	99.1
CDR3-IMGT (germline)	269	275	7	7	0	0	100
Total	N/A	N/A	274	265	9	0	96.7


Alignments

                                     <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                      L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  T  W  N  W  I  R 
                    Query_1870  2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTACTTGGAACTGGATCAGG  91
V  96.7% (265/274)  IGHV6-1*01  31   ........G...T.G.......................................G......G....AG....G.................  120
                                      L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                     ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                      Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 
                    Query_1870  92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGA  181
V  96.7% (265/274)  IGHV6-1*01  121  ..........................................................................................  210
                                      Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                     --------------------------FR3-IMGT----------------------------------------------------><--
                                      I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_1870  182  ATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCA  271
V  96.7% (265/274)  IGHV6-1*01  211  .........A................................................................................  300
                                      I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                     --------CDR3-IMGT--------->                                  
                                      R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1870  272  AGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  332
V  96.7% (265/274)  IGHV6-1*01  301  ....---------------------------------------------------------  304
                                      R                                                           
J  97.9% (46/47)    IGHJ3*02    4    --------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_88888

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           382     4e-108
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	267	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  H
                    Query_1871   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATCA  90
V  92.1% (267/290)  IGHV5-51*01  6    ....................C........A.....................G.........A......C.........C.......GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  P
                    Query_1871   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCCC  180
V  92.1% (267/290)  IGHV5-51*01  96   ...................................................G.......A.....G.......G....C.....C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  P  K  A  S  D  T  A
                    Query_1871   181  GTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCCGAAGGCCTCGGACACCGC  270
V  92.1% (267/290)  IGHV5-51*01  186  ...............G........C...................................G.......G..T..................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_1871   271  CTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  350
V  92.1% (267/290)  IGHV5-51*01  276  .A.......C.....G....------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    -----------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_88889

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           344     6e-97
IGHD6-6*01                                                                                            18.0    0.59 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ATAAAAAGGGTGGGA	TATACCAACTCGTCC	GGGGCGA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ATAAAAAGGGTGGGATATACCAACTCGTCCGGGGCGAACTTTGAGAAC	IKRVGYTNSSGANFEN	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1872   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.5% (231/242)  IGHV3-30*03  47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  R  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1872   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTAATAGATTCTATGCTGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.5% (231/242)  IGHV3-30*03  137  ....................................A..A......A...........................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  V  Y  L  Q  M  K  N  L  R  T  E  D  T  A  V  Y  Y  C  I  K  R  V  G  Y  T  N  S  
                    Query_1872   181  AGAACACGGTGTATCTGCAAATGAAGAACCTAAGAACTGAGGACACGGCTGTCTATTATTGTATAAAAAGGGTGGGATATACCAACTCGT  270
V  95.5% (231/242)  IGHV3-30*03  227  ........C................C.G...G...G................G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  86.7% (13/15)    IGHD6-6*01   4    -----------------------------------------------------------------------------....G..G.....  16

                                      T------------------>                                  
                                      S  G  A  N  F  E  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1872   271  CCGGGGCGAACTTTGAGAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  86.7% (13/15)    IGHD6-6*01   17   ..----------------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    ---------.......CT....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_88882

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            417     6e-119
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	112	2	0	98.2
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	273	6	0	97.8


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_1873  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  97.8% (273/279)  IGHV6-1*01  26   ...........................................................G......G....AG.................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_1873  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  97.8% (273/279)  IGHV6-1*01  116  ..........................................................................................  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  H  Y  
                    Query_1873  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGCATTACT  270
V  97.8% (273/279)  IGHV6-1*01  206  ..............A....................................................................T......  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------CDR3-IMGT--------->                                  
                                     C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1873  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  97.8% (273/279)  IGHV6-1*01  296  .........---------------------------------------------------------  304
                                     C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02    4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_88883

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           329     3e-92
IGHD4-17*01                                                                                           21.8    0.041
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTCGGA	TGACTTCGGTGACT	TCCGGGGCAG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATTCGGATGACTTCGGTGACTTCCGGGGCAGCTGGTTCGACCCC	VKDSDDFGDFRGSWFDP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  I  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1874   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCACATTCAATATCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  92.0% (230/250)  IGHV3-64*05  47   ....................T.A..............C....G..G......T.....................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  G  I  S  G  N  G  H  R  T  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1874   91   AATATGTTTCAGGTATCAGTGGTAATGGGCATAGAACATACTATGGAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-64*05  137  ............C...T...A........GG...C........C.C............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  M  F  F  L  Q  M  S  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  D  S  D  D  F  G  D  
                    Query_1874   181  AGAACATGTTCTTTCTTCAAATGAGCAGTCTGAGAGCTGAGGACACGGCTCTGTATTACTGTGTGAAAGATTCGGATGACTTCGGTGACT  270
V  92.0% (230/250)  IGHV3-64*05  227  ......C.C.G.A.G...................................G...................--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  92.9% (13/14)    IGHD4-17*01  1    ----------------------------------------------------------------------------.....A........  14

                                      GT-------------------->                                  
                                      F  R  G  S  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1874   271  TCCGGGGCAGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (47/47)   IGHJ5*02     5    ----------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_88881

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*06                                                                                           332     3e-93
IGHD3-9*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*06	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGTTTCCCATGGCT	ACTGGTCATT	GACTCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGTTTCCCATGGCTACTGGTCATTGACTCTTTTGACTCC	AKDRFPWLLVIDSFDS	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  S  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1875   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCGGCAGTTATGGCATGAACTGGGTCCGCCAGGCTCCAGGCAAGGGGTTGG  90
V  92.4% (231/250)  IGHV3-33*06  47   .........................................A.T..C.........C.............................C...  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  A  D  G  T  K  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1875   91   AGTGGGTGGCACTTATTTGGGCTGATGGAACTAAGACATACTATGCAGAGTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.4% (231/250)  IGHV3-33*06  137  ...........G....A...TA........G...T.A............C........................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  I  V  Y  L  Q  M  D  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  R  F  P  W  L  L  
                    Query_1875   181  AGAACATTGTGTATCTGCAAATGGACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAAAGATCGTTTCCCATGGCTACTGG  270
V  92.4% (231/250)  IGHV3-33*06  227  ......CGC..............A................G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (9/10)     IGHD3-9*01   17   -------------------------------------------------------------------------------------.....  21

                                      T------------------>                                  
                                      V  I  D  S  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_1875   271  TCATTGACTCTTTTGACTCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  324
D  90.0% (9/10)     IGHD3-9*01   22   .T...-------------------------------------------------  26
J  95.3% (41/43)    IGHJ4*02     6    -----------.......A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_88887

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD1-1*01                                                                                            12.2    31   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGACC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGACCCTTTCACTCC	AEEKRRVPRGPFHS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  T  Y  A  V  S  W  V  R  Q  T  S  G  K  G  L  
                    Query_1876   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCGTGAGCTGGGTCCGCCAGACTTCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ................................T.........G..G.......A.................G..C...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  G  G  A  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  
                    Query_1876   91   AGTGGGTCTCAGCCATTAGTGGTGGTGGTGCTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGA  180
V  94.0% (235/250)  IGHV3-23*01  137  .............T.........A......G...............................................G.........C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      T  N  T  L  Y  L  Q  M  N  R  L  R  A  D  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  
                    Query_1876   181  CGAACACGCTGTATCTGCAAATGAACAGACTGAGAGCCGACGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGG  270
V  94.0% (235/250)  IGHV3-23*01  227  A...........................C...........G........................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------------------------......------------  17

                                      ------------->                                  
                                      G  P  F  H  S  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_1876   271  GACCCTTTCACTCCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  318
J  93.2% (41/44)    IGHJ4*02     5    ----....G...A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_88884

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           344     6e-97
IGHD3-3*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATCGGGCCCCGGGG	TTTGGAGTGGT	CAGCCCCGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCGGGCCCCGGGGTTTGGAGTGGTCAGCCCCGCTGACTAC	ARNRAPGFGVVSPADY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  S  F  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1877   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTAGTTTTGAAATGAACTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  94.4% (234/248)  IGHV3-48*03  47   ...................................A............A........................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  S  G  F  T  I  Y  Y  A  D  S  V  K  R  R  F  T  V  S  R  D  N  G  
                    Query_1877   91   AGTGGATTTCATACATTAGTAGTAGTGGTTTTACCATATACTACGCAGACTCTGTGAAGCGCCGATTCACCGTCTCCAGAGACAACGGCA  180
V  94.4% (234/248)  IGHV3-48*03  137  .....G.......................AG............................G...........A...............C..  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  I  N  S  L  T  V  E  D  T  A  V  Y  Y  C  A  R  N  R  A  P  G  F  G  
                    Query_1877   181  AGAACTCACTGTATCTGCAGATAAACAGCCTGACAGTCGAGGACACGGCTGTATATTACTGTGCGAGAAATCGGGCCCCGGGGTTTGGAG  270
V  94.4% (234/248)  IGHV3-48*03  227  ...................A..G..........G..C...............T...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-3*01   12   -----------------------------------------------------------------------------------.......  18

                                      T------------------>                                  
                                      V  V  S  P  A  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_1877   271  TGGTCAGCCCCGCTGACTACTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTCAG  324
D  100.0% (11/11)   IGHD3-3*01   19   ....--------------------------------------------------  22
J  97.6% (40/41)    IGHJ4*02     8    -------------....................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_72964

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           316     2e-88
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGTCCCGACTGAACTACGGGATGGACGTC	ARLMSRLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  S  H  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_1878   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATCAGCCATTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  91.4% (223/244)  IGHV4-59*08  49   ..................A............G.........TAG................A............................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  H  I  Y  Y  R  G  S  P  N  N  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1878   91   TGGATTGAGCACATCTATTACAGGGGGAGTCCCAATAACGACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*08  139  .......G.T.T...........T.....CA....CT..A..................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_1878   181  CAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTAATGTCCCGACTGAACTACGGGATG  270
V  91.4% (223/244)  IGHV4-59*08  229  .............A.C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  94.0% (47/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  P  V  S  S 
                    Query_1878   271  GACGTCTGGGGCCAAGGGACCACGGTCCCCGTCTCGTCA  309
J  94.0% (47/50)    IGHJ6*02     24   ...........................A.......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_76988

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*02                                                                                            364     5e-103
IGHD2-21*02                                                                                           14.1    9.4   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*02	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCACTTTG	GGTGGGGACT	CTCTCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCACTTTGGGTGGGGACTCTCTCCCTTTGACTAT	ARDHFGWGLSPFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	95	19	0	83.3
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	262	29	0	90


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T  D  H
                    Query_1879   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCACCGACCA  90
V  90.0% (262/291)  IGHV1-2*02   6    ..................G..........................................................C........G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  H  W  V  R  Q  A  P  G  H  G  P  E  W  M  G  W  I  N  P  K  T  G  G  I  S  Y  A  Q
                    Query_1879   91   CTATATCCACTGGGTGCGACAGGCCCCTGGACATGGGCCTGAGTGGATGGGATGGATCAACCCTAAGACTGGTGGCATAAGTTATGCACA  180
V  90.0% (262/291)  IGHV1-2*02   96   ......G..........................A....T...........................C.G........C..AC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  D  G  R  V  T  M  T  R  D  T  S  I  T  T  V  Y  M  E  L  S  R  L  T  S  G  D  T  A
                    Query_1879   181  GAGATTTGACGGCCGGGTCACGATGACCAGGGACACGTCCATTACTACAGTCTACATGGAGTTGTCGAGGCTGACATCTGGCGACACGGC  270
V  90.0% (262/291)  IGHV1-2*02   186  ..AG...C.G...A.......C....................C.GC....C..........C..AGC.......G.....A.........  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  D  H  F  G  W  G  L  S  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1879   271  CGTATATTACTGTGCGAGAGATCACTTTGGGTGGGGACTCTCTCCCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  90.0% (262/291)  IGHV1-2*02   276  ...G.................--------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                       
D  90.0% (9/10)     IGHD2-21*02  11   -----------------------------.....T....--------------------------------------------------  20
J  97.7% (43/44)    IGHJ4*02     5    ---------------------------------------------.........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_76989

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         322     2e-90
IGHD2-2*02                                                                                            35.3    4e-06
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	GGATATTGTAGTGGTATCAGGTGCTTTACC	GGGGTAG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGGATATTGTAGTGGTATCAGGTGCTTTACCGGGGTAGGGTTCGACCCC	AREGYCSGIRCFTGVGFDP	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	56	30	24	3	3	80
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	21	0	0	100
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	17	3	92


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  S  V  S  G  D  S  I  S  S  G     Y  P  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_1880     4    CCCTGAGACTCTCCTGTTCTGTCTCTGGTGACTCCATCAGCAGTGGG---TACCCCTGGAGCTGGATCCGGCAGCCACCGGGGAAGGGCC  90
V  92.0% (230/250)  IGHV4-30-2*01  50   .....TCC...A....CG............G...............TGGT...T.........................A..........  139
                                           L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  R  S  
                    Query_1880     91   TGGAGTGGATTGGGTACATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCATTAGACAGGTCCA  180
V  92.0% (230/250)  IGHV4-30-2*01  140  .........................................................................A...G............  229
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                        T  N  Q  V  S  L  K  L  R  S  V  T  A  A  G  T  A  V  Y  Y  C  A  R  E  G  Y  C  S  G  I  
                    Query_1880     181  CGAACCAGGTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGGCACGGCCGTGTACTACTGTGCCAGAGAGGGATATTGTAGTGGTATCA  270
V  92.0% (230/250)  IGHV4-30-2*01  230  A.......T................C................A............T..............--------------------  299
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (26/30)    IGHD2-2*02     2    -----------------------------------------------------------------------............A...C..  20

                                        -IMGT----------------------->                                  
                                        R  C  F  T  G  V  G  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1880     271  GGTGCTTTACCGGGGTAGGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  86.7% (26/30)    IGHD2-2*02     21   .C....A....----------------------------------------------------  31
J  100.0% (45/45)   IGHJ5*02       7    ------------------.............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_76986

Length=318
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           304     9e-85
IGHD4-17*01                                                                                           16.1    2.0  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCG	ACGGTGAC	ACCGAGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACGGTGACACCGAGAATGACTAT	AADGDTENDY	230	259	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	232	3	3	0	0	100
Total	N/A	N/A	220	207	13	0	94.1


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  L  T  F  S  S  F  G  M  H  W  V  R  Q  P  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_1881   13   GTCTGGACTCACCTTCAGTAGCTTTGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTCATATGGTATGA  102
V  94.1% (207/220)  IGHV3-33*01  72   .......T...............A......................G...............................T...........  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  K  K  Y  Y  T  D  S  V  K  G  R  F  I  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_1881   103  TGGAAGTAAGAAATACTATACAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCAAGAACACGTTGTATCTGCAGATGAA  192
V  94.1% (207/220)  IGHV3-33*01  162  .........T.........G........................C............................C..........A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------CDR3-IMGT--------->                       
                                        S  L  R  V  D  D  T  A  V  Y  F  C  A  A  D  G  D  T  E  N  D  Y  W  G  Q  G  T  L  V  T
                    Query_1881   193  CAGCCTGAGAGTCGACGACACGGCTGTCTATTTCTGTGCGGCCGACGGTGACACCGAGAATGACTATTGGGGCCAGGGAACCCTGGTCAC  282
V  94.1% (207/220)  IGHV3-33*01  252  ...........C...G...........G....A.......--------------------------------------------------  291
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                   
D  100.0% (8/8)     IGHD4-17*01  6    --------------------------------------------........--------------------------------------  13
J  97.6% (40/41)    IGHJ4*02     8    ------------------------------------------------------------......C.......................  37

                                                 
                                        V  S  S  
                    Query_1881   283  CGTCTCCTCAG  293
J  97.6% (40/41)    IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30726981


Query= Query_76987

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           346     2e-97
IGHD2-15*01                                                                                           14.1    9.8  
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGAG	GGCC	GGATATT	CCTCTGATGGACGTGAATATATGACCCCGCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGGGCCGGATATTCCTCTGATGGACGTGAATATATGACCCCGCTCTTTGACTTT	TRAGYSSDGREYMTPLFDF	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	64	5	0	92.8
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	287	254	33	0	88.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I  N  Y 
                    Query_1882   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGACGATCTCCTGCCAGGCATCCGGTTACAGTTTTATCAATTAC  91
V  88.5% (254/287)  IGHV1-18*04  7    .................................................A.G........A....T..T.......CC....C..GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  H  K  G  N  T  K  Y  A  Q 
                    Query_1882   92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAGGGCCTCGAGTGGATGGGATGGATCAGCGCGCACAAAGGTAACACAAAATATGCACAG  181
V  88.5% (254/287)  IGHV1-18*04  97   ........C.......................A..G..T.......................TT....T...........C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  Y  L  D  V  T  S  L  R  S  D  D  T  A 
                    Query_1882   182  AGTTTCCAGGGCAGAGTCACCATGACCACAGACACACTCACGGGCACAGCGTACCTGGACGTGACGAGTCTGCGATCTGACGACACGGCC  271
V  88.5% (254/287)  IGHV1-18*04  187  .AGC................................TC....A.......C...A....GC...G...C...A.................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  T  R  A  G  Y  S  S  D  G  R  E  Y  M  T  P  L  F  D  F  W  G  Q  G  T  P  V 
                    Query_1882   272  GTTTATTACTGTACGAGGGCCGGATATTCCTCTGATGGACGTGAATATATGACCCCGCTCTTTGACTTTTGGGGCCAGGGAACCCCGGTC  361
V  88.5% (254/287)  IGHV1-18*04  277  ..G.........G....-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  100.0% (7/7)     IGHD2-15*01  2    ---------------------.......--------------------------------------------------------------  8
J  90.9% (40/44)    IGHJ4*02     5    -----------------------------------------------------------........AC................T....  35

                                                   
                                       S  V  S  S  
                    Query_1882   362  TCCGTCTCCTCAG  374
J  90.9% (40/44)    IGHJ4*02     36   A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_76985

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           335     4e-94
IGHD2-21*02                                                                                           10.3    124  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	CGC	ACTGC	GTCAGAGAAGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCGCACTGCGTCAGAGAAGTTTTGATTAC	ARGALRQRSFDY	261	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	43	7	0	86
CDR1-IMGT	51	74	24	20	4	0	83.3
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	104	10	0	91.2
CDR3-IMGT (germline)	261	268	8	7	1	0	87.5
Total	N/A	N/A	268	241	27	0	89.9


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  I  C  G  V  S  G  G  S  F  S  N  Y  Q  R  S  W  I  R  
                    Query_1883   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCATTTGCGGTGTATCTGGTGGGTCCTTCAGTAATTACCAACGGAGCTGGATCCGCC  90
V  89.9% (241/268)  IGHV4-34*01  26   ........T.......T...................CC....C...C.A................GG....T.CT...............  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  A  S  Y  N  P  S  L  K  S  R  A  A  
                    Query_1883   91   AGCCCCCAGGGAAGGGTCTGGAGTGGATTGGTGAAATCAATCATAGTGGAAGTGCCAGCTACAACCCGTCCCTCAAGAGTCGAGCCGCCG  180
V  89.9% (241/268)  IGHV4-34*01  116  ................G..............G....................CA...A..........................T.A..A  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      V  S  V  D  T  S  K  S  Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  A  Y  Y  C  A  R  G  
                    Query_1883   181  TATCAGTAGACACGTCCAAGAGCCAGCTGTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCTGCCTATTACTGTGCGCGAGGCG  270
V  89.9% (241/268)  IGHV4-34*01  206  .....................A....T.C.............G..........................TG............A....--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  

                                      ----CDR3-IMGT------------>                                  
                                      A  L  R  Q  R  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1883   271  CACTGCGTCAGAGAAGTTTTGATTACTGGGGCCAGGGAACGCTGGTCACCGTCTCTTCAG  330
D  100.0% (5/5)     IGHD2-21*02  18   -.....------------------------------------------------------  22
J  93.0% (40/43)    IGHJ4*02     6    -----------------.....C.................C..............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_76982

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            283     1e-78
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GAATGAACCCTGAATT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATGAACCCTGAATTC	ARGMNPEF	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	40	11	0	78.4
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	215	34	0	86.3


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  I  F  R  G  H  W  M  T  W  I  R  H  L  P  D  K  G  L  
                    Query_1884  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTCGTGGCCACTGGATGACTTGGATTCGCCACCTTCCAGATAAGGGGCTGC  90
V  86.3% (215/249)  IGHV3-7*01  47   ....................................C....A..A..T.T.......GC...G.C.....GGC.....GG.........G  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     Q  W  V  A  N  I  K  D  D  G  S  E  E  H  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1884  91   AGTGGGTGGCCAATATAAAGGACGATGGAAGTGAAGAGCACTATGGTGACTCTGTGAAGGGCCGATTCACCATCTCCCGAGACAACGCCC  180
V  86.3% (215/249)  IGHV3-7*01  137  .............C......C.A...........GA.AT......TG..............................A...........A  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                     Q  N  S  L  F  L  Q  M  N  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  M  N  P  E  F  W  
                    Query_1884  181  AGAACTCTCTGTTTTTGCAGATGAACAACCTGAGAGTCGAAGACACGGCTGTATATTACTGTGCGAGAGGAATGAACCCTGAATTCTGGG  270
V  86.3% (215/249)  IGHV3-7*01  227  .......A....A.C....A.......G........C...G...........G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  94.3% (33/35)    IGHJ4*02    14   -------------------------------------------------------------------------------------.....  18

                                                                   
                                     G  Q  G  T  L  V  I  V  S  S  
                    Query_1884  271  GCCAGGGAACCCTGGTCATCGTCTCGTCAG  300
J  94.3% (33/35)    IGHJ4*02    19   ..................C......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_76983

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD2-2*01                                                                                            14.1    9.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTCAATTTGGTTCCGCAAATGG	GTACCAG	N/A	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTCAATTTGGTTCCGCAAATGGGTACCAGTACGGCATGGACGTC	ARFQFGSANGYQYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_1885   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  98.3% (284/289)  IGHV5-51*03  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  I  I  Y  P  G  D  S  D  T  R  Y  S  L
                    Query_1885   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATTGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCT  180
V  98.3% (284/289)  IGHV5-51*03  96   ................................................G........................................C  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  R  A  S  D  S  A
                    Query_1885   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACAGCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ............................................G.............................A...........C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  F  Q  F  G  S  A  N  G  Y  Q  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_1885   271  CATGTATTACTGTGCGAGATTTCAATTTGGTTCCGCAAATGGGTACCAGTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  98.3% (284/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-2*01   15   ------------------------------------------.......-----------------------------------------  21
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------------.....T...................................  55

                                             
                                        S  S 
                    Query_1885   361  CTCCTCA  367
J  97.9% (47/48)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_76980

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           327     8e-92
IGHD3-10*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	N/A	CGGGGAG	GAGGGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGCGGGGAGGAGGGCTTC	ASGEEGF	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	228	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  Y  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1886   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTGACTACTATATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.3% (228/247)  IGHV3-11*06  47   ....................................C...............C....G....A...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  R  S  S  T  H  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1886   91   AGTGGGTTTCACATATTAGTAGAAGTAGTACTCACACAAACTATGCAGACTCTGTGAAGGGCCGATTTACCATCTCCAGAGACAACGCCA  180
V  92.3% (228/247)  IGHV3-11*06  137  ...........T.C........T.......G.T..........C.......................C......................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  Y  L  Q  M  N  S  L  V  T  D  D  T  A  I  Y  Y  C  A  S  G  E  E  G  F  W  G  
                    Query_1886   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGGTAACCGACGACACGGCTATATATTACTGCGCCAGCGGGGAGGAGGGCTTCTGGGGCC  270
V  92.3% (228/247)  IGHV3-11*06  227  ................................AG.G....G.........G.G........T..G..-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-10*01  15   -------------------------------------------------------------------.......----------------  21
J  97.1% (34/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_1886   271  AGGGAACCCTGGTCACCGTGTCCTCAG  297
J  97.1% (34/35)    IGHJ4*02     22   ...................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_76981

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           321     6e-90
IGHD2-8*01                                                                                            10.3    117  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*01	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATTTTCCAG	GGTGT	GCACA	TGATA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATTTTCCAGGGTGTGCACATGATAAC	ARNFPGCAHDN	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  R  I  R  H  H  P  G  K  G 
                    Query_1887   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGCTACTACTGGAGCCGGATCCGCCATCACCCAGGTAAGGGC  90
V  91.2% (227/249)  IGHV4-31*03  49   ..................................................T............T..........G........G......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  Y  I  Y  Y  S  A  S  T  Y  Y  T  P  A  L  K  R  R  V  T  I  *  V  D  T  S 
                    Query_1887   91   CTGGAGTGGATGGGGTACATCTATTACAGTGCGAGCACCTACTACACCCCCGCCCTCAAGAGACGAGTTACCATATGAGTAGACACGTCC  180
V  91.2% (227/249)  IGHV4-31*03  139  ...........T...................G..............A...GT..........T.............C............T  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       Q  N  H  F  S  L  K  V  T  S  V  S  A  A  N  P  A  V  Y  Y  G  A  R  N  F  P  G  C  A  H 
                    Query_1887   181  CAGAACCATTTCTCCCTGAAGGTGACCTCTGTGTCCGCCGCAAACCCGGCCGTGTATTACGGTGCGAGAAATTTTCCAGGGTGTGCACAT  270
V  91.2% (227/249)  IGHV4-31*03  229  A.......G............C...G.......A.T.....GG..A..............T........---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD2-8*01   17   -------------------------------------------------------------------------------.....------  21
J  95.1% (39/41)    IGHJ3*02     10   -----------------------------------------------------------------------------------------.  10

                                      ----->                                  
                                       D  N  W  G  Q  G  A  M  V  T  V  S  S  
                    Query_1887   271  GATAACTGGGGCCAAGGGGCAATGGTCACCGTCTCTTCAG  310
J  95.1% (39/41)    IGHJ3*02     11   ....T.............A.....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_334759

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           363     1e-102
IGHD3-10*01                                                                                           10.3    123   
IGHJ2*01                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CG	GGTTC	CATCTGTCCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGACGGGTTCCATCTGTCCCCCTACTGGTACTTCGATCTC	ARDGFHLSPYWYFDL	249	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	256	8	5	3	0	62.5
Total	N/A	N/A	256	244	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1888   1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCACCTTTGGTGATTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  95.3% (244/256)  IGHV3-49*04  47   .........................T..........................T................................G....  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  T  Y  G  G  T  A  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_1888   91   AGTGGGTAGGTTTCATTAGAAGCAAGACTTATGGTGGGACAGCAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  95.3% (244/256)  IGHV3-49*04  137  .........................AG..............A................................................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------------CDR3
                                      D  S  K  S  I  A  F  L  R  M  D  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  D  G  F  H  L  
                    Query_1888   181  ATTCCAAAAGCATCGCCTTTCTGCGAATGGACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTGCCAGGGACGGGTTCCATCTGT  270
V  95.3% (244/256)  IGHV3-49*04  227  ..................A.....A....A......................................A.T..A..--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (5/5)     IGHD3-10*01  11   ------------------------------------------------------------------------------.....-------  15

                                      -IMGT----------------->                                  
                                      S  P  Y  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_1888   271  CCCCCTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCCTCAG  327
J  98.1% (52/53)    IGHJ2*01     1    ----........................................A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_334758

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*05                                                                                           338     5e-95
IGHD3-10*01                                                                                           33.4    1e-05
IGHJ1*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*05	IGHD3-10*01	IGHJ1*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GAG	ACTATGGCTCGGGGAGTTAT	CCCCTTG	AGCAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGGAGACTATGGCTCGGGGAGTTATCCCCTTGAGCAC	HRRLWLGELSP*A	250	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	249	115	103	11	1	89.6
CDR3-IMGT (germline)	250	256	7	7	0	0	100
Total	N/A	N/A	256	238	17	1	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  V  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1889   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTGTCAGTGTCGCCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.0% (238/256)  IGHV3-15*05  47   .......T..............................T.....AA...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  D  R  F  T  I  S  R  N  
                    Query_1889   91   AGTGGGTTGGCCGTATTAAGAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAGGACAGATTCACCATCTCAAGAAATG  180
V  93.0% (238/256)  IGHV3-15*05  137  ...................A............................................A.G...................G...  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT-----------------------------------------------------><----------------CDR3
                                      D  S  K  K  H  S  T  P  A  N  E  Q  C  E  D  R  G  H  S  R  V  L  L  Y  H  R  R  L  W  L  
                    Query_1889   181  ATTCAAAAAAACACAGTACACCTGCAAATGAACAGTGTGAAGACCGAGGACACAGCCGTGTATTATTGTACCACAGGAGACTATGGCTCG  270
V  93.0% (238/256)  IGHV3-15*05  227  ....-.........GC.GT.T...............C....A.......................C..........--------------  301
                                      D  S   K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                
D  95.0% (19/20)    IGHD3-10*01  6    -------------------------------------------------------------------------------.......T...  16

                                      -IMGT--------------->                                  
                                      G  E  L  S  P  *  A  L  G  P  G  N  P  G  H  R  L  L   
                    Query_1889   271  GGGAGTTATCCCCTTGAGCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  95.0% (19/20)    IGHD3-10*01  17   .........----------------------------------------------  25
J  97.4% (38/39)    IGHJ1*01     14   ----------------................C......................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_221528

Length=313
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           277     8e-77
IGHD3-10*01                                                                                           23.8    0.010
IGHJ4*01                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-10*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	TGG	TCGGGGAGTTAT	C	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGTGGTCGGGGAGTTATCGACTAC	ASGRGVIDY	230	256	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	20	4	0	83.3
FR2-IMGT	41	91	51	47	4	0	92.2
CDR2-IMGT	92	115	24	21	3	0	87.5
FR3-IMGT	116	229	114	104	10	0	91.2
CDR3-IMGT (germline)	230	234	5	4	1	0	80
Total	N/A	N/A	221	199	22	0	90


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  K  T  H  G  M  V  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  A  I  L  Y  D 
                    Query_1890   14   TCTGGATTCACCTTCAAAACCCATGGCATGGTCTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGCAATTTTATATGAT  103
V  90.0% (199/221)  IGHV3-30*03  73   ................GT.G.T........CA............................................TT..A.C.......  162
                                       S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  S  N  Q  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  N  N  T  L  F  L  Q  M  N 
                    Query_1890   104  GGAAGTAATCAACACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAACAACACCCTGTTTCTGCAAATGAAC  193
V  90.0% (199/221)  IGHV3-30*03  163  .........A..T....................................................G.....G....A.............  252
                                       G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><--------CDR3-IMGT-------->                           
                                       S  L  R  T  D  D  T  G  L  Y  Y  C  A  S  G  R  G  V  I  D  Y  W  G  Q  G  T  L  V  T  V 
                    Query_1890   194  AGCCTGAGAACTGACGACACGGGATTATATTACTGTGCAAGTGGTCGGGGAGTTATCGACTACTGGGGCCAAGGAACCCTGGTCACCGTC  283
V  90.0% (199/221)  IGHV3-30*03  253  .........G....G.......CTG.G...........G..-------------------------------------------------  293
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                    
D  100.0% (12/12)   IGHD3-10*01  14   --------------------------------------------............----------------------------------  25
J  100.0% (40/40)   IGHJ4*01     9    ---------------------------------------------------------.................................  41

                                             
                                       S  S  
                    Query_1890   284  TCCTCAG  290
J  100.0% (40/40)   IGHJ4*01     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30199026


Query= Query_80628

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           43.0    2e-08
IGHJ3*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TATCACTGC	TTACTATGATAGTAGTGGTTAT	A	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATATCACTGCTTACTATGATAGTAGTGGTTATAATGCTTTTGATATC	VRDITAYYDSSGYNAFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  L  R  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1891   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCCTTAGGAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ...................................A..T....C.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  D  S  S  V  S  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1891   91   AGTGGGTCTCAGGTATTAGTGATAGTAGTGTTAGTACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATTTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  ............C........G....G...G...C...T..................................C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  V  Q  M  N  R  M  R  A  E  D  T  A  V  Y  Y  C  V  R  D  I  T  A  Y  Y  D  
                    Query_1891   181  AGAACACGCTGTATGTGCAAATGAACAGAATGAGAGCCGAGGACACGGCCGTATATTACTGTGTGAGAGATATCACTGCTTACTATGATA  270
V  93.6% (234/250)  IGHV3-23*01  227  ..............C.............CC.................................C..A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (22/22)   IGHD3-22*01  4    -------------------------------------------------------------------------------...........  14

                                      IMGT--------------------->                                  
                                      S  S  G  Y  N  A  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1891   271  GTAGTGGTTATAATGCTTTTGATATCTGGGGCCAAGGGACATTGGTCACCGTCTCTTCAG  330
D  100.0% (22/22)   IGHD3-22*01  15   ...........-------------------------------------------------  25
J  97.9% (47/48)    IGHJ3*02     3    ------------.............................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_80629

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           353     9e-100
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ2*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCC	TAGCAGCGGCTGGTAC	TTTAGCG	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCTAGCAGCGGCTGGTACTTTAGCGGGTACTTCGATCTC	ARDPSSGWYFSGYFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  S  T  N  W  V  R  Q  A  P  E  K  G  L  
                    Query_1892   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGGAGTTATAGCACGAACTGGGTCCGCCAGGCTCCAGAGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-21*01  47   .....................................C.....T..C.......T.......................G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  G  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  A  
                    Query_1892   91   AGTGGGTCTCATCCATTAGTAGTAGTGGTTCTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAAAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-21*01  137  ..........................A..AG...............................................G...........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  K  S  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  S  S  G  W  Y  
                    Query_1892   181  AGAAGTCACTGTATCTACAAATGGACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGACCCTAGCAGCGGCTGGTACT  270
V  95.2% (238/250)  IGHV3-21*01  227  ....C...........G......A..............................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.8% (15/16)    IGHD6-13*01  6    -------------------------------------------------------------------------.......A........-  21

                                      T------------------>                                  
                                      F  S  G  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_1892   271  TTAGCGGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
J  100.0% (48/48)   IGHJ2*01     6    ------................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_80626

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           299     3e-83
IGHD1-20*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAACGATTA	TATAACTGGAA	TTCAGTCACAAGGGGTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAACGATTATATAACTGGAATTCAGTCACAAGGGGTGACTACGGTATGGACGTC	ARQRLYNWNSVTRGDYGMDV	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	245	218	27	0	89


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  V  S  T  N  F  V  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1893   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCAGTGTCAGTACCAATTTCGTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.0% (218/245)  IGHV3-53*01  47   ....................................CC.......G...C.A.A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  M  F  S  G  G  A  T  Y  Y  A  D  S  V  E  G  R  F  T  V  S  R  D  T  S  K  
                    Query_1893   91   AGTGGGTCTCAGTTATGTTTAGTGGTGGTGCCACCTACTACGCAGACTCCGTGGAGGGCCGATTCACCGTCTCCAGAGACACTTCCAAGA  180
V  89.0% (218/245)  IGHV3-53*01  137  ................T.A...C......AG...A..................A..............A............A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------------CDR3-
                                      N  S  L  D  L  E  M  N  N  L  R  V  D  D  T  A  V  Y  Y  C  A  R  Q  R  L  Y  N  W  N  S  
                    Query_1893   181  ACTCGTTGGATCTTGAGATGAATAACCTGAGAGTCGACGACACGGCCGTCTATTATTGTGCGAGACAACGATTATATAACTGGAATTCAG  270
V  89.0% (218/245)  IGHV3-53*01  227  ..A..C..T.....C.A.....C.G........C...G...........G.....C.........-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD1-20*01  3    --------------------------------------------------------------------------...........-----  13

                                      IMGT------------------------>                                 
                                      V  T  R  G  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1893   271  TCACAAGGGGTGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  100.0% (50/50)   IGHJ6*02     13   ------------..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_54486

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           315     5e-88
IGHD6-19*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAACGGCTGTAT	CAGTGACTGG	CACCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAACGGCTGTATCAGTGACTGGCACCCTTGACTAC	ARDRTAVSVTGTLDY	236	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	19	22	4	4	0	0	100
CDR1-IMGT	23	46	24	19	5	0	79.2
FR2-IMGT	47	97	51	49	2	0	96.1
CDR2-IMGT	98	121	24	24	0	0	100
FR3-IMGT	122	235	114	109	5	0	95.6
CDR3-IMGT (germline)	236	243	8	8	0	0	100
Total	N/A	N/A	225	213	12	0	94.7


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  N  Y  N  S  H  A  L  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_1894   19   GTCTGGATTCAACTACAATAGCCATGCCTTGCACTGGGTCCGCCAGGCTCCGGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  108
V  94.7% (213/225)  IGHV3-33*01  72   ...........C..T..G....T...G.A......................A......................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  E  D  S  V  R  G  R  F  S  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_1894   109  TGGAAGTAATAAATACTATGAAGACTCCGTGAGGGGCCGGTTCAGCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAA  198
V  94.7% (213/225)  IGHV3-33*01  162  ....................C...........A......A....C.............................................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------CDR3-IMGT----------------->        
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  T  A  V  S  V  T  G  T  L  D  Y  W  G  Q
                    Query_1894   199  CAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATAGAACGGCTGTATCAGTGACTGGCACCCTTGACTACTGGGGCCA  288
V  94.7% (213/225)  IGHV3-33*01  252  ...C.........................................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  90.0% (9/10)     IGHD6-19*01  9    -----------------------------------------------------------.....G....---------------------  18
J  100.0% (42/42)   IGHJ4*02     7    --------------------------------------------------------------------------................  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_1894   289  GGGAACCCTGGTCACCGTCTCCTCAG  314
J  100.0% (42/42)   IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_80624

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           366     2e-103
IGHD3-9*01                                                                                            29.5    2e-04 
IGHJ5*01                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-9*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGG	TTACGAGATTTTGATTGGTTA	CTTCCGGGGGGCGCAAATG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGGTTACGAGATTTTGATTGGTTACTTCCGGGGGGCGCAAATGGGTTCGACTCC	AKDRLRDFDWLLPGGANGFDS	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1895   1    GGTCCCTGAGACTCTCCTGTGCAGGTTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-30*18  47   ........................CC....................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  Y  K  Y  N  L  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1895   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTTATAAATATAATCTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.8% (242/250)  IGHV3-30*18  137  ................................A.......CT..GC............................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  R  L  R  D  F  D  
                    Query_1895   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATCGGTTACGAGATTTTGATT  270
V  96.8% (242/250)  IGHV3-30*18  227  ......................................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.5% (19/21)    IGHD3-9*01   4    --------------------------------------------------------------------------......T.......C.  19

                                      DR3-IMGT-------------------------->                                  
                                      W  L  L  P  G  G  A  N  G  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1895   271  GGTTACTTCCGGGGGGCGCAAATGGGTTCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  90.5% (19/21)    IGHD3-9*01   20   .....----------------------------------------------------------------  24
J  97.8% (44/45)    IGHJ5*01     7    ------------------------...................A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_221520

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            344     6e-97
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAAGGGAGA	TGACTACGGT	CAGGGTCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAAAAGGGAGATGACTACGGTCAGGGTCCTTTTGACTTC	AREKGDDYGQGPFDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1896   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  94.0% (235/250)  IGHV3-9*01   47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  W  N  S  N  G  V  D  Y  A  D  S  V  K  G  R  F  A  I  S  R  D  N  A  
                    Query_1896   91   AGTGGGTCTCAAGTATTAGTTGGAATAGTAATGGTGTTGACTATGCGGACTCTGTGAAGGGCCGATTTGCCATCTCCAGAGACAATGCCA  180
V  94.0% (235/250)  IGHV3-9*01   137  ...........G.................GG.A.CA.A.G...........................CA................C....  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  F  Y  Y  C  A  R  E  K  G  D  D  Y  G  
                    Query_1896   181  AGAACTCCCTGTTTTTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTCTATTACTGTGCAAGAGAAAAGGGAGATGACTACGGTC  270
V  94.0% (235/250)  IGHV3-9*01   227  ............A.C.....................................G.............A...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD4-17*01  1    -------------------------------------------------------------------------------..........-  10

                                      ---------------->                                  
                                      Q  G  P  F  D  F  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_1896   271  AGGGTCCTTTTGACTTCTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  321
J  95.3% (41/43)    IGHJ4*02     6    --------.......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_80622

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD2-2*01                                                                                            10.3    134   
IGHJ3*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTGAAGTCTTT	TACCA	CCGAG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATATC	ASLKSFTTEDAFDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	270	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  T  S
                    Query_1897   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATTCGACTTTACCACCTC  90
V  93.8% (270/288)  IGHV5-51*01  6    ..........................................................................A.AG........G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  E  R  Q  M  P  G  T  G  L  E  W  M  G  V  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_1897   91   TTGGATCGGCTGGGAGCGCCAGATGCCCGGGACAGGCCTGGAATGGATGGGGGTCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  93.8% (270/288)  IGHV5-51*01  96   C.............T.................A.........G.........A............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  S  T  Y  L  Q  W  G  S  V  K  A  S  D  T  A
                    Query_1897   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACAGTACCTACCTGCAGTGGGGCAGCGTGAAGGCCTCGGACACCGC  270
V  93.8% (270/288)  IGHV5-51*01  186  ............................................G..CCG..............A.....C...................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  D  Y  C  A  S  L  K  S  F  T  T  E  D  A  F  D  I  W  G  Q  G  T  M  V  A  V  S  S  
                    Query_1897   271  CATGGATTACTGTGCGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCGCCGTCTCTTCAG  359
V  93.8% (270/288)  IGHV5-51*01  276  ....T.............-----------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                          
D  100.0% (5/5)     IGHD2-2*01   16   ------------------------------.....------------------------------------------------------  20
J  98.0% (48/49)    IGHJ3*02     2    ----------------------------------------....................................A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_54482

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            307     1e-85
IGHD2-21*01                                                                                           12.2    31   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	TGGTGA	AGTATTCCTTGGATC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGGTGAAGTATTCCTTGGATCACTTTGACCAC	ARLVKYSLDHFDH	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	221	25	0	89.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  N  D  H  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_1898   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATTACCAATGATCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  89.8% (221/246)  IGHV4-4*02   49   ..................GC...........G......C.G..G.AG.A.........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  T  G  E  I  Y  R  S  G  S  T  T  Y  N  P  S  L  Q  S  R  V  A  F  S  V  D  K  S  K 
                    Query_1898   91   GAGTGGACTGGAGAAATCTATCGTAGTGGGAGCACCACTTACAACCCGTCCCTTCAGAGTCGAGTCGCCTTCTCAGTAGACAAGTCCAAG  180
V  89.8% (221/246)  IGHV4-4*02   139  .......T...G..........A..............AC..............CA...........A..A.A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  F  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  V  K  Y  S  L  D  H 
                    Query_1898   181  AACCAGTTCTCCCTGAGTCTGAGATCTGTGACCGCCGCCGATACGGCCGTATATTACTGTGCGAGATTGGTGAAGTATTCCTTGGATCAC  270
V  89.8% (221/246)  IGHV4-4*02   229  ................AG.....C..............G..C........G...............------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-21*01  13   -------------------------------------------------------------------......-----------------  18
J  95.6% (43/45)    IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                                  
                                       F  D  H  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_1898   271  TTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  313
J  95.6% (43/45)    IGHJ4*02     6    ......T................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_80620

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           377     9e-107
IGHD3-3*01                                                                                            31.5    5e-05 
IGHJ4*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTAAAG	CGATGTTTGGAGTGGTTAT	CCATTTGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTAAAGCGATGTTTGGAGTGGTTATCCATTTGGGCTACTTTGACTAC	AKVKAMFGVVIHLGYFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	245	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1899   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (245/249)  IGHV3-23*01  47   .....................C....................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  D  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1899   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGATAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  98.4% (245/249)  IGHV3-23*01  137  ..............................G...........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  V  K  A  M  F  G  V  
                    Query_1899   181  AGAACACCCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTTAAAGCGATGTTTGGAGTGG  270
V  98.4% (245/249)  IGHV3-23*01  227  .......G....A........................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  94.7% (18/19)    IGHD3-3*01   7    ---------------------------------------------------------------------------....T..........  21

                                      IMGT--------------------->                                  
                                      V  I  H  L  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1899   271  TTATCCATTTGGGCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  94.7% (18/19)    IGHD3-3*01   22   ....--------------------------------------------------------  25
J  100.0% (47/47)   IGHJ4*02     2    -------------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_54480

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD3-3*01                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTCCTG	TACGATTTTTGGAATGGT	CAGCAGTACTTTTTCAAGGGTTTA	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCTGTACGATTTTTGGAATGGTCAGCAGTACTTTTTCAAGGGTTTAGACGTC	ARVLYDFWNGQQYFFKGLDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  A  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  R  F  A  N  S
                    Query_1900   1    GCAGCTGGCGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGGTTTGCCAACTC  90
V  93.1% (269/289)  IGHV5-51*01  6    ........T.........................................A...........................C...A...G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  G  P
                    Query_1900   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGAAAAGGCCTGGAGTGGATGGGCGTCATCTACCCTGGTGACTCTGATACCAGATACGGCCC  180
V  93.1% (269/289)  IGHV5-51*01  96   ........G.....................G....................GA.......T........................A....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  G  L  R  A  S  D  T  A
                    Query_1900   181  GTCCTTCCAGGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTATCTTCACTGGAGCGGCCTGAGGGCCTCGGACACCGC  270
V  93.1% (269/289)  IGHV5-51*01  186  .........A..................................G.........C..G..G......A......A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  F  C  A  R  V  L  Y  D  F  W  N  G  Q  Q  Y  F  F  K  G  L  D  V  W  G  Q  G  T  S
                    Query_1900   271  CATGTATTTCTGTGCGAGAGTCCTGTACGATTTTTGGAATGGTCAGCAGTACTTTTTCAAGGGTTTAGACGTCTGGGGCCAAGGGACTTC  360
V  93.1% (269/289)  IGHV5-51*01  276  ........A..........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  94.4% (17/18)    IGHD3-3*01   5    -------------------------.............G....-----------------------------------------------  22
J  94.9% (37/39)    IGHJ6*02     24   -------------------------------------------------------------------....................CA.  46

                                                      
                                        V  T  V  S  S 
                    Query_1900   361  GGTCACCGTCTCCTCA  376
J  94.9% (37/39)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_229736

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            307     1e-85
IGHD5-18*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	N/A	TGGATACAACTATGG	GAGTGTCCCGGCGGGCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTGGATACAACTATGGGAGTGTCCCGGCGGGCATTGACTAC	AGYNYGSVPAGIDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	25	2	0	92.6
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	17	4	0	81
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	220	24	0	90.2


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  V  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_1901   1    GGTCCCTGAGACTCTCCTGCGCTGTTTCTGGTGTCTCCATCAGTAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGAC  90
V  90.2% (220/244)  IGHV4-4*02   47   ..A.....TCC...A..........C.......G.........C............................................G.  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  M  Y  H  G  G  T  T  N  Y  K  P  S  L  K  S  R  V  S  I  S  V  D  T  S  
                    Query_1901   91   TGGAGTGGATTGGGGAAATGTACCATGGTGGGACCACCAACTACAAGCCGTCCCTCAAGAGTCGGGTCTCCATATCCGTGGACACGTCCA  180
V  90.2% (220/244)  IGHV4-4*02   137  ...................C..T...A......G............C.................A...A.......A..A....A.....  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  G  Y  N  Y  G  S  V  P  
                    Query_1901   181  AGAACCAGTTCTCCCTGACGCTGACCTCTGTGACCGCCGCGGACACGGCCATTTATTATTGTGCTGGATACAACTATGGGAGTGTCCCGG  270
V  90.2% (220/244)  IGHV4-4*02   227  ..................A.....G.........................G.G.....C.....--------------------------  290
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  93.3% (14/15)    IGHD5-18*01  2    ----------------------------------------------------------------........G......-----------  16

                                      ------------->                                  
                                      A  G  I  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_1901   271  CGGGCATTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  318
J  97.6% (41/42)    IGHJ4*02     7    ------....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_229737

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD5-12*01                                                                                           10.3    133   
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	GTGGC	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGGCAACTACAACTACTACACTATGGACGTC	ARRGNYNYYTMDV	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  H
                    Query_1902   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCCA  90
V  95.9% (278/290)  IGHV5-51*01  6    ...............................A........................................................T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  S  P
                    Query_1902   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACAGCCC  180
V  95.9% (278/290)  IGHV5-51*01  96   C.......G........................................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  G  Q  V  T  M  S  V  D  K  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1902   181  GCCCTTCCAAGGCCAGGTCACCATGTCAGTCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCAGACACCGC  270
V  95.9% (278/290)  IGHV5-51*01  186  .T......................C....C.......................A...........................G........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                 
                                        S  Y  Y  C  A  R  R  G  N  Y  N  Y  Y  T  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1902   271  CAGCTATTACTGTGCGAGACGTGGCAACTACAACTACTACACTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  355
V  95.9% (278/290)  IGHV5-51*01  276  ..TG................-----------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD5-12*01  10   --------------------.....------------------------------------------------------------  14
J  94.9% (56/59)    IGHJ6*02     4    --------------------------.....T........GG...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_229734

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           357     1e-100
IGHD3-10*01                                                                                           12.2    37    
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	N/A	TCGGGG	GGGGGGGGGGGAAGACAATAGGTCTTATCGAAGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGGGATCGGGGGGGGGGGGGGGAAGACAATAGGTCTTATCGAAGGTAC	GRDRGGGGEDNRSYRRY	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	74	1	0	98.7
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	95	19	0	83.3
CDR3-IMGT (germline)	289	296	8	6	2	0	75
Total	N/A	N/A	296	262	34	0	88.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  I 
                    Query_1903   1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCATC  90
V  88.5% (262/296)  IGHV1-46*01  1    .......................G................................................................C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       K  Y  F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  D  P  S  G  G  G  T  T  Y 
                    Query_1903   91   AAGTATTTTATGCATTGGGTGCGCCAGGCCCCTGGACAAGGACTTGAGTGGATGGGAATAATCGACCCCAGTGGTGGCGGCACAACCTAC  180
V  88.5% (262/296)  IGHV1-46*01  91   .GC..C.A......C........A.................G.....................A....T........TA......G....  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  Q  F  K  G  K  V  T  M  T  R  D  T  S  T  T  T  V  Y  M  E  L  N  N  R  R  L  G  A 
                    Query_1903   181  GCACAGCAGTTCAAGGGCAAAGTCACCATGACCAGGGACACGTCCACGACCACTGTCTACATGGAATTGAACAACCGGAGGTTGGGGGCC  270
V  88.5% (262/296)  IGHV1-46*01  181  ......A.....C......G.............................G...A...........GC...G..G..T...A.CT.A..A.  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------------CDR3-IMGT-------------------->                     
                                       A  A  V  Y  S  C  G  R  D  R  G  G  G  G  E  D  N  R  S  Y  R  R  Y  W  G  Q  G  T  L  V 
                    Query_1903   271  GCGGCCGTCTATTCCTGTGGGAGGGATCGGGGGGGGGGGGGGGAAGACAATAGGTCTTATCGAAGGTACTGGGGTCAGGGAACCCTGGTC  360
V  88.5% (262/296)  IGHV1-46*01  271  A.......G....A.....C...A..----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------......----------------------------------------------------------  19
J  97.3% (36/37)    IGHJ4*02     12   ------------------------------------------------------------------........C...............  35

                                                   
                                       T  V  S  S  
                    Query_1903   361  ACCGTCTCCTCAG  373
J  97.3% (36/37)    IGHJ4*02     36   .............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_229735

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_1904   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_1904   91   CTCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..G...............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G 
                    Query_1904   181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .........................G................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_1904   271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  97.2% (35/36)    IGHJ4*02     13   ----------------................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_229732

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ2*01                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTACTATAATCCTAGTGGTTTTTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACTATAATCCTAGTGGTTTTTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGFYGYWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  N  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1905   1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAATAATTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ...........................G............G..G...C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  D  I  *  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1905   91   TGGATTGGGGACATCTAATACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  .........T.T.....T........................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  F  Y 
                    Query_1905   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATTACTATAATCCTAGTGGTTTTTAC  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.0% (21/25)    IGHD3-22*01  4    -----------------------------------------------------------------.......G..AG........A....  28

                                      -------------------->                                  
                                       G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_1905   271  GGGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  325
J  100.0% (52/52)   IGHJ2*01     2    ---....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_229733

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           388     5e-110
IGHD4-17*01                                                                                           21.8    0.047 
IGHJ2*01                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCC	CTACGGTGACT	TACCCCCT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCCCTACGGTGACTTACCCCCTTACTGGTACTTCGATCTC	ARGPYGDLPPYWYFDL	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	99	15	0	86.8
CDR3-IMGT (germline)	290	294	5	5	0	0	100
Total	N/A	N/A	292	270	22	0	92.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  S  
                    Query_1906   3    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTTCCA  92
V  92.5% (270/292)  IGHV5-51*01  2    ....G.....G..........................................................G............C...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  H  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_1906   93   GCCACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGACACCAGATACA  182
V  92.5% (270/292)  IGHV5-51*01  92   ..T............................................................................T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  P  F  Q  E  Q  V  N  L  S  V  E  K  S  I  T  T  A  Y  L  Q  W  T  S  L  R  P  S  D  
                    Query_1906   183  GCCCGCCCTTCCAAGAACAGGTCAACCTTTCAGTCGAAAAGTCCATCACCACCGCCTACCTGCAGTGGACCAGCCTGAGGCCCTCGGACA  272
V  92.5% (270/292)  IGHV5-51*01  182  .....T.........GC.......C.A.C....C...C..........G....................G........A.G.........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      T  G  I  Y  Y  C  A  R  G  P  Y  G  D  L  P  P  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  
                    Query_1906   273  CCGGCATATACTACTGTGCGAGGGGCCCCTACGGTGACTTACCCCCTTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTG  362
V  92.5% (270/292)  IGHV5-51*01  272  ...C...G..T...........--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (11/11)   IGHD4-17*01  4    ----------------------------...........---------------------------------------------------  14
J  100.0% (50/50)   IGHJ2*01     2    -----------------------------------------------...........................................  44

                                             
                                      V  S  S
                    Query_1906   363  TCTCCTC  369
J  100.0% (50/50)   IGHJ2*01     45   .......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_229730

Length=294
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           195     5e-52
IGHD6-6*01                                                                                            14.1    7.1  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-6*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	ACTGGGTGTGTG	GCAGTTCGTC	AAAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAACTGGGTGTGTGGCAGTTCGTCAAAGACTTTGACTAC	ERTGCVAVRQRL*L	193	237	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	95	51	41	1	9	80.4
FR3-IMGT	96	192	114	87	10	17	76.3
CDR3-IMGT (germline)	193	200	8	8	0	0	100
Total	N/A	N/A	226	189	11	26	83.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1907   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  75.6% (189/250)  IGHV3-23*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------------------------------------------------------------FR3-IMGT---
                                      E  G                                                    H  G  P  V  H  L  F  R  R  Q  L  Q
                    Query_1907   91   AGGGG--------------------------------------------------CACGGGCCGGTTCACCTTTTCCGGAGACAACTCCA  130
V  75.6% (189/250)  IGHV3-23*01  137  ..T..GTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTG.A.............A.C...A.......T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -------------------------------------------------------------><-----------------CDR3-IMGT-
                                        E  H  A  V  S  A  N  E  Q  P  E  S  R  G  H  G  R  T  S  L  C  E  R  T  G  C  V  A  V  R
                    Query_1907   131  AGAACACGCTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTACATCGCTGTGCGAAAGAACTGGGTGTGTGGCAGTTCG  220
V  75.6% (189/250)  IGHV3-23*01  227  ............A........................................T..TA............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (9/10)     IGHD6-6*01   8    ----------------------------------------------------------------------------------....C...  15

                                      ---------------->                                  
                                        Q  R  L  *  L  L  G  P  G  N  P  G  H  R  L  L   
                    Query_1907   221  TCAAAGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  271
D  90.0% (9/10)     IGHD6-6*01   16   ..-------------------------------------------------  17
J  100.0% (45/45)   IGHJ4*02     4    ------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 28192797


Query= Query_92171

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            279     3e-77
IGHD3-10*01                                                                                           12.2    32   
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATTTAGTAACGCCTGGGAC	TCGGGG	TG	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACGCCTGGGACTCGGGGTGTTGAGTCC	AGHLVTPGTRGVES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	46	5	0	90.2
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	100	14	0	87.7
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	212	34	0	86.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_1908   1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCGCCCGGGAAGGGTCTG  90
V  86.2% (212/246)  IGHV4-4*01   49   ..................G..G......G.........C.GC.GT.............................C..A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  R  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  N  R  V  T  I  S  V  D  K  P  R 
                    Query_1908   91   GAGCGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAATCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  86.2% (212/246)  IGHV4-4*01   139  ...T..........A...T.....A.T..GAG............C.........A...G.........................T...AG  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_1908   181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACGCCTGGGACTCGG  270
V  86.2% (212/246)  IGHV4-4*01   229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  V  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_1908   271  GGTGTTGAGTCCTGGGGCCAGGGAACCTTGATCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.5% (38/42)    IGHJ4*02     7    ----....C.A................C..G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_103536

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           400     9e-114
IGHD2-15*01                                                                                           10.3    135   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCTCCTGC	GTAGC	CGAGTCGGTGTG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGATCTCCTGCGTAGCCGAGTCGGTGTGGACTCC	ATDLLRSRVGVDS	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	72	3	0	96
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	17	7	0	70.8
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	297	8	7	1	0	87.5
Total	N/A	N/A	296	276	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  A  C  K  A  S  G  G  T  F  S 
                    Query_1909   2    CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCAGTGAAGGTCGCCTGCAAGGCCTCTGGAGGCACCTTCAGC  91
V  93.2% (276/296)  IGHV1-69*06  1    ..................................................G.........T..........T..................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  S  S  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  V  P  I  L  E  A  A  K  Y 
                    Query_1909   92   AGCTCTTCTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCGTCCCTATACTTGAAGCAGCTAAGTAC  181
V  93.2% (276/296)  IGHV1-69*06  91   ....A.G......G.................................................A.......CT...GTA....A..C...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  A  D  K  S  T  T  T  A  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_1909   182  GCACAGAAGTTCCAGGGCAGAGTCACGATGACCGCGGACAAATCCACGACCACAGCCTACATGGAGCTGAGTAGCCTGAGATCTGAAGAC  271
V  93.2% (276/296)  IGHV1-69*06  181  .............................T...................G.....................C..............G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                
                                       T  A  V  Y  Y  C  A  T  D  L  L  R  S  R  V  G  V  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1909   272  ACGGCCGTCTATTACTGTGCGACAGATCTCCTGCGTAGCCGAGTCGGTGTGGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  93.2% (276/296)  IGHV1-69*06  271  ........G.............G...---------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                  
D  100.0% (5/5)     IGHD2-15*01  18   ----------------------------------.....--------------------------------------------------  22
J  97.4% (37/38)    IGHJ4*02     9    ---------------------------------------------------....A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_229738

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           333     1e-93
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGAACG	TAGAAGTGGCTG	CAATCCTAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGAACGTAGAAGTGGCTGCAATCCTAATTGACTAC	ARANVEVAAILIDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  Y  G  M  V  W  V  R  Q  A  P  G  K  G  L  
                    Query_1910   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACCTTCAGTTACTATGGCATGGTCTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-30*03  47   ............................T...............AG..........CA................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  D  G  T  K  I  F  Y  A  D  S  V  K  G  R  F  T  I  A  R  D  N  S  
                    Query_1910   91   AGTGGGTGGCACTTATATCATATGATGGAACCAAAATATTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCGCCAGAGACAACTCCA  180
V  92.8% (231/249)  IGHV3-30*03  137  ...........G..................GT..T.A..A..................................T..........T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  E  M  N  S  L  R  I  E  D  T  A  V  H  Y  C  A  R  A  N  V  E  V  A  A  
                    Query_1910   181  AGAACACGCTGTATCTGGAAATGAACAGCCTGAGAATTGAGGACACGGCTGTTCATTACTGTGCGAGAGCGAACGTAGAAGTGGCTGCAA  270
V  92.8% (231/249)  IGHV3-30*03  227  .................C.................GC...............GT...............---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD6-19*01  6    ---------------------------------------------------------------------------...C........---  17

                                      ------------->                                  
                                      I  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1910   271  TCCTAATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (42/42)   IGHJ4*02     7    ------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_290358

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD4-17*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGTATACCTGA	TGACTACGTTGAC	AC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGTATACCTGATGACTACGTTGACACCTTTGACCAG	AGIPDDYVDTFDQ	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	242	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_1911   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (242/246)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1911   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCGCCAACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.4% (242/246)  IGHV4-31*03  139  ....................................A..T..................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  I  P  D  D  Y  V  D 
                    Query_1911   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCTGTATATTACTGTGCGGGTATACCTGATGACTACGTTGAC  270
V  98.4% (242/246)  IGHV4-31*03  229  ..................................................C..G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  92.3% (12/13)    IGHD4-17*01  1    -----------------------------------------------------------------------------........G....  13

                                      ----------->                                  
                                       T  F  D  Q  W  G  R  G  T  L  V  T  V  S  S  
                    Query_1911   271  ACCTTTGACCAGTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  316
J  93.2% (41/44)    IGHJ4*02     5    --.......T.C.......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_101524

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         296     2e-82
IGHD2-15*01                                                                                           31.5    6e-05
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GGAGAGGGTTGTCGCGCTT	TTGTAGTGCTGGTAGCTGC	GAACTCTC	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGGGAGAGGGTTGTCGCGCTTTTGTAGTGCTGGTAGCTGCGAACTCTCCGGTATGGACGTC	ATGRGLSRFCSAGSCELSGMDV	246	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	101	13	0	88.6
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	249	219	30	0	88


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  V  V  S  G  G  S  I  T  S  G  A  S  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_1912     4    CCCTGAGACTCTCCTGCGTTGTCTCTGGTGGCTCCATTACCAGTGGGGCTTCCTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  88.0% (219/249)  IGHV4-30-4*01  50   .....TCC...A.....AC..................C.G......T.A..A......................................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  N  I  H  H  S  G  N  T  Y  Y  N  P  S  L  K  S  R  I  T  I  S  I  D  R  S  
                    Query_1912     94   TGGAGTGGATTGGGAACATCCATCACAGCGGGAACACCTACTACAACCCGTCCCTCAAGAGTCGAATTACCATATCCATAGATAGGTCCA  183
V  88.0% (219/249)  IGHV4-30-4*01  140  ..............T.....T..T....T....G...............................G..........AG....C.C.....  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><---------------------------
                                        K  N  Q  L  S  L  N  L  N  S  V  T  A  A  D  A  A  V  Y  Y  C  A  T  G  R  G  L  S  R  F  
                    Query_1912     184  AAAACCAGCTCTCCCTGAACCTGAACTCTGTAACAGCCGCGGACGCGGCCGTGTATTACTGTGCCACAGGGAGAGGGTTGTCGCGCTTTT  273
V  88.0% (219/249)  IGHV4-30-4*01  230  .G......T..........G....G......G..T.....A...A.....................G..---------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  94.7% (18/19)    IGHD2-15*01    7    ----------------------------------------------------------------------------------------..  8

                                        -CDR3-IMGT--------------------------->                                 
                                        C  S  A  G  S  C  E  L  S  G  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_1912     274  GTAGTGCTGGTAGCTGCGAACTCTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  344
D  94.7% (18/19)    IGHD2-15*01    9    ......G..........------------------------------------------------------  25
J  97.8% (45/46)    IGHJ6*02       17   -------------------------..................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_251257

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           363     1e-102
IGHD3-3*01                                                                                            33.4    1e-05 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCCATCTTGGCGG	TTACGCTTTTTGGCGTGGTTATT	CCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCCATCTTGGCGGTTACGCTTTTTGGCGTGGTTATTCCCTTGACTAC	ARDPHLGGYAFWRGYSLDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1913   1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCCCCAGGCAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-33*01  47   ....................G........................G...........................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  H  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_1913   91   AGTGGGTGGCTGTTATATGGTATGATGGAAGTAATAAATACCATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCA  180
V  96.4% (241/250)  IGHV3-33*01  137  ..........A..............................T.............................A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  K  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  H  L  G  G  Y  
                    Query_1913   181  AGAAGACGTTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGAGATCCCCATCTTGGCGGTTACG  270
V  96.4% (241/250)  IGHV3-33*01  227  ....C...C.................................................C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.3% (21/23)    IGHD3-3*01   4    -------------------------------------------------------------------------------------.....  8

                                      -IMGT----------------------->                                  
                                      A  F  W  R  G  Y  S  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1913   271  CTTTTTGGCGTGGTTATTCCCTTGACTACTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  333
D  91.3% (21/23)    IGHD3-3*01   9    A.......A.........---------------------------------------------  26
J  97.6% (41/42)    IGHJ4*02     7    ---------------------............................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_290351

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           380     1e-107
IGHD3-22*01                                                                                           16.1    2.6   
IGHJ3*01                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGATCCCTT	CTATGATA	CTACAGGAAGTTATTCCTTTGACCTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACATATGGATCCCTTCTATGATACTACAGGAAGTTATTCCTTTGACCTT	VRHMDPFYDTTGSYSFDL	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  R  F  A  N  S
                    Query_1914   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGGTTTGCCAACTC  90
V  91.8% (267/291)  IGHV5-51*01  6    ..................................................A...........................C...A...G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  G  P
                    Query_1914   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGAAAAGGCCTGGAGTGGATGGGCGTCATCTACCCTGGTGACTCTGATACCAGATACGGCCC  180
V  91.8% (267/291)  IGHV5-51*01  96   ........G.....................G....................GA.......T........................A....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  G  L  G  A  S  D  P  A
                    Query_1914   181  GTCCTTCCAGGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTATCTTCACTGGAGCGGCCTGGGGGCCTCGGACCCCGC  270
V  91.8% (267/291)  IGHV5-51*01  186  .........A..................................G.........C..G..G......A.....AA..........A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        I  Y  Y  C  V  R  H  M  D  P  F  Y  D  T  T  G  S  Y  S  F  D  L  W  G  Q  G  T  M  V  T
                    Query_1914   271  CATATACTATTGTGTGAGACATATGGATCCCTTCTATGATACTACAGGAAGTTATTCCTTTGACCTTTGGGGCCAAGGGACAATGGTCAC  360
V  91.8% (267/291)  IGHV5-51*01  276  ...G..T..C....C......---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-22*01  7    ---------------------------------........-------------------------------------------------  14
J  97.1% (33/34)    IGHJ3*01     17   -------------------------------------------------------------------.......................  39

                                                 
                                        V  S  S  
                    Query_1914   361  CGTCTCCTCAG  371
J  97.1% (33/34)    IGHJ3*01     40   ......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_290352

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           237     1e-64
IGHD2-21*02                                                                                           14.1    8.5  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CACTGAGAGGGGAGGCC	GACGGCTATT	TT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACTGAGAGGGGAGGCCGACGGCTATTTTTACTACGGTATGGACGTC	ATLRGEADGYFYYGMDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	90	24	0	78.9
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	196	45	0	81.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  N  W  S  S  S  G  Y  Y  W  N  W  V  R  Q  R  P  G  Q  G  L  E 
                    Query_1915   1    ACCCTGTCCCTCACCTGCACTGTCTACAATTGGTCCTCCAGTGGTTACTATTGGAACTGGGTACGGCAGCGCCCCGGTCAGGGGCTGGAG  90
V  81.3% (196/241)  IGHV4-34*01  49   ..................G.......TGG.G......T............C....G....A.C..C....C...A..GA...........  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  T  W  Y  N  P  T  L  E  G  R  A  T  I  S  V  G  R  S  N  N 
                    Query_1915   91   TGGATTGGCGAAATCAGTCATAGTGGGTCCACGTGGTATAATCCGACCCTCGAGGGTCGGGCCACCATATCAGTGGGCAGGTCCAACAAT  180
V  81.3% (196/241)  IGHV4-34*01  139  ........G.......A.........AAG...CAAC..C..C...T.....A..A....A.T............A.A..C......G..C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       V  F  S  L  R  L  T  S  V  T  A  A  D  T  S  V  Y  Y  C  A  T  L  R  G  E  A  D  G  Y  F 
                    Query_1915   181  GTCTTCTCCCTGAGGTTGACCTCCGTGACCGCCGCGGACACGTCTGTCTATTACTGTGCGACACTGAGAGGGGAGGCCGACGGCTATTTT  270
V  81.3% (196/241)  IGHV4-34*01  229  CAG..........A.C...G...T..................G....G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.0% (9/10)     IGHD2-21*02  17   ------------------------------------------------------------------------------...T......--  26

                                      ----------------->                                 
                                       Y  Y  G  M  D  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_1915   271  TACTACGGTATGGACGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCCTCA  321
J  98.0% (50/51)    IGHJ6*02     12   .................................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_290354

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           315     5e-88
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AC	CTACGGTGAC	GATATCCTCCCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCTACGGTGACGATATCCTCCCATACTTTGACTAC	ARTYGDDILPYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	43	8	0	84.3
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	225	24	0	90.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  R  G  G  G  F  Y  W  S  W  I  R  Q  R  P  G  N  G 
                    Query_1916   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCCGCGGTGGTGGTTTCTACTGGAGTTGGATCCGCCAGCGCCCAGGGAACGGC  90
V  90.4% (225/249)  IGHV4-31*03  49   ...............................G.......A..A.........A.........C.............A.........G...  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  R  I  Y  D  S  G  S  T  Y  Y  N  P  S  L  K  G  R  V  L  I  S  V  D  T  F 
                    Query_1916   91   CTGGAGTGGATAGGAAGGATCTATGACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGGGTCGCGTTCTCATATCAGTGGACACATTT  180
V  90.4% (225/249)  IGHV4-31*03  139  ...........T..GTAC......T...................................A....A...AC.........A.....G.C.  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       N  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  Y  G  D  D  I  L 
                    Query_1916   181  AACAACCAATTCTCACTGAAGCTGACCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAACCTACGGTGACGATATCCTC  270
V  90.4% (225/249)  IGHV4-31*03  229  ..G.....G.....C..........G...........................................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (10/10)   IGHD4-17*01  4    -----------------------------------------------------------------------..........---------  13

                                      -------------->                                  
                                       P  Y  F  D  Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_1916   271  CCATACTTTGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  319
J  97.8% (45/46)    IGHJ4*02     3    ---...................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_290356

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*03                                                                                           299     3e-83
IGHD3-22*01                                                                                           23.8    0.012
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TAGTCCGAAAACCGCTGGGA	TATGACTATGAGAGTAGCGGT	GA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTAGTCCGAAAACCGCTGGGATATGACTATGAGAGTAGCGGTGATGACTAC	AKVVRKPLGYDYESSGDDY	261	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	102	54	50	1	3	92.6
CDR2-IMGT	103	146	39	20	4	15	51.3
FR3-IMGT	147	260	114	106	8	0	93
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	233	16	18	87.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><-------------------FR2-IMGT---------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1917   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTTAGTAACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.3% (233/267)  IGHV3-23*03  47   ....................G......................C.G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -----------><-----------------CDR2-IMGT----------------><---------------------------------
                                      E  W  V  S  G  I  T  S  R  G  G  S  S  G  G  G  C  G  T  Y  Y  A  D  S  V  K  G  R  F  T  
                    Query_1917   91   AGTGGGTCTCAGGCATTACTAGTAGGGGTGGTAGTAGTGGAGGGGGTTGCGGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCA  180
V  87.3% (233/267)  IGHV3-23*03  137  ............---...T.TA...C...........---------------.........T............................  208
                                      E  W  V  S     V  I  Y  S  G  G  S  S                 T  Y  Y  A  D  S  V  K  G  R  F  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  R  D  N  S  K  N  T  L  F  L  L  M  K  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  V  
                    Query_1917   181  TCTCCAGAGACAATTCCAAGAACACACTGTTTCTGCTAATGAAGAGCCTGAGAGTCGAGGACACGGCCGTCTATTACTGTGCGAAAGTAG  270
V  87.3% (233/267)  IGHV3-23*03  209  ..........T..............G....A.....A......C..........C...............A................---  295
                                      I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K     

                                      --------------CDR3-IMGT----------------------->                                
                                      V  R  K  P  L  G  Y  D  Y  E  S  S  G  D  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1917   271  TCCGAAAACCGCTGGGATATGACTATGAGAGTAGCGGTGATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  349
D  85.7% (18/21)    IGHD3-22*01  2    -----------------...T.......T.....T...-----------------------------------------  22
J  100.0% (39/39)   IGHJ4*02     8    ----------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_290357

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           325     2e-91
IGHD2-8*01                                                                                            12.2    31   
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TAATGG	CCCGACTGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGGCCCGACTGAACTACGGCATGGACGTC	ARLMARLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  L  T  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_1918   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCCTCACCAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCCGGGAAGGGACTGGAA  90
V  92.6% (226/244)  IGHV4-59*08  49   ..................A............G....A...GT..................A.............A..............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  R  P  N  N  N  P  S  L  R  S  R  V  T  I  S  V  D  A  S  K  N 
                    Query_1918   91   TGGATTGAGTATATCTATTACAGAGGGCGTCCCAACAACAACCCCTCCCTCAGGAGTCGGGTCACCATATCAGTAGACGCGTCCAAGAAC  180
V  92.6% (226/244)  IGHV4-59*08  139  .......G...............T...A.CA.....T...............A......A..................A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  A  R  L  N  Y  G  M 
                    Query_1918   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACTAATGGCCCGACTGAACTACGGCATG  270
V  92.6% (226/244)  IGHV4-59*08  229  ...................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-8*01   13   ----------------------------------------------------------------......--------------------  18
J  94.0% (47/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_1918   271  GACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCGTCA  309
J  94.0% (47/50)    IGHJ6*02     24   .............A.....................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_262945

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           364     5e-103
IGHD3-16*01                                                                                           12.2    35    
IGHJ6*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCC	TTGGGG	CGGC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCTTGGGGCGGCCTACGGTTTGGACGTC	ARPLGAAYGLDV	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	261	28	0	90.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  D  S  L  T  I  S  C  Q  V  S  G  Y  I  F  T  H  Y
                    Query_1919   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCGGGGGACTCTCTGACGATCTCCTGTCAGGTTTCTGGATACATCTTCACCCACTA  90
V  90.3% (261/289)  IGHV5-51*03  6    ...............................A..........G.......A..........A...G...........G...T...AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  V  A  G  K  G  L  E  W  M  G  V  I  Y  P  D  D  S  D  A  R  Y  S  P
                    Query_1919   91   TTGGATCGCCTGGGTGCGCCAGGTGGCCGGCAAAGGCCTAGAGTGGATGGGGGTCATCTATCCTGACGACTCTGATGCCAGATACAGCCC  180
V  90.3% (261/289)  IGHV5-51*03  96   C.......G.............A..C....G........G............A............GT.........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  L  V  T  I  S  V  D  K  S  L  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1919   181  GTCCTTTCAAGGCCTGGTCACCATCTCAGTCGACAAGTCCCTCAGTACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  90.3% (261/289)  IGHV5-51*03  186  ......C.......A..............C..........A....C....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  F  C  A  R  P  L  G  A  A  Y  G  L  D  V  W  G  Q  G  T  A  V  V  V  S  S 
                    Query_1919   271  CATTTACTTCTGTGCGAGACCCCTTGGGGCGGCCTACGGTTTGGACGTCTGGGGCCAAGGGACCGCGGTCGTCGTCTCGTCA  352
V  90.3% (261/289)  IGHV5-51*03  276  ...G..T.A..........---------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                
D  100.0% (6/6)     IGHD3-16*01  16   -----------------------......-----------------------------------------------------  21
J  89.8% (44/49)    IGHJ6*02     14   ---------------------------------.......A.......................A.....AC......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_262946

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1920   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_1920   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_1920   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1920   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_249155

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           371     6e-105
IGHD3-3*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	241	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1921   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.4% (241/245)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_1921   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.4% (241/245)  IGHV4-34*01  139  .........................................................................T................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  P  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_1921   181  CAGTTCTCCCCGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  98.4% (241/245)  IGHV4-34*01  229  ..........T....................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_1921   271  GCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  319
J  97.7% (42/43)    IGHJ4*02     6    ------..............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_262941

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           277     9e-77
IGHD3-22*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAC	ATAGTACTGG	CCGAATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATAGTACTGGCCGAATCATTGACTAT	ARAHSTGRIIDY	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	22	8	0	73.3
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	100	14	0	87.7
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	213	36	0	85.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G  
                    Query_1922   4    CCCTGAGACTCTCCTGCAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCAGGGAAGGGCC  93
V  85.5% (213/249)  IGHV4-31*01  50   .....TCC...A......C................A...G.A....TGG..A...C....G.............CA..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  M  G  Y  I  Y  H  V  E  S  T  S  R  N  P  S  L  K  S  Q  L  T  I  S  L  D  P  S  
                    Query_1922   94   TGGAGTGGATGGGATACATCTATCACGTTGAGAGCACCTCCCGCAACCCGTCCCTCAAGAGTCAACTTACCATTTCACTCGACCCGTCTA  183
V  85.5% (213/249)  IGHV4-31*01  140  ..........T..G.........T..AG..G........A.TA....................T.G.......A...G.A...A......  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  S  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  S  T  G  R  I  
                    Query_1922   184  AGAGCCAGTTCTCCCTAAAACTGACCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCACATAGTACTGGCCGAATCA  273
V  85.5% (213/249)  IGHV4-31*01  230  ...A............G..G....G....G.......................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-22*01  12   ------------------------------------------------------------------------......G...--------  21

                                      ------->                                  
                                      I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1922   274  TTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ4*02     7    .......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_262943

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD3-10*01                                                                                           46.8    1e-09 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAC	TATTACTATGGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTATTACTATGGTTCGGGGAGTTATTTTGAATAC	ARGHYYYGSGSYFEY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_1923   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ...............................G.............................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  F  T  I  S  V  D  T  S 
                    Query_1923   91   CTGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGATTTACCATATCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ...............T..................................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  Y  Y  Y  G  S 
                    Query_1923   181  AAGAACCAGTTCTCCCTGAAGGTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTATTACTATGGTTCG  270
V  97.6% (244/250)  IGHV4-31*03  229  .....................C....C...........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (24/24)   IGHD3-10*01  2    ---------------------------------------------------------------------------...............  16

                                      ----------------->                                  
                                       G  S  Y  F  E  Y  W  G  Q  G  T  L  V  T  A  S  S  
                    Query_1923   271  GGGAGTTATTTTGAATACTGGGGCCAGGGAACCCTGGTCACCGCCTCCTCAG  322
D  100.0% (24/24)   IGHD3-10*01  17   .........-------------------------------------------  25
J  95.3% (41/43)    IGHJ4*02     6    ---------.....C............................T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_262949

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           311     4e-87
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TAGGG	AGCAGTGGCTGGTAC	GGGATAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTAGGGAGCAGTGGCTGGTACGGGATAGACTACTTTGAATAC	ARVGSSGWYGIDYFEY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	22	24	3	3	0	0	100
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	19	5	0	79.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	223	211	12	0	94.6


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  S  I  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  N  D  D 
                    Query_1924   22   TCTGGATTCAGCATCAGTAGTTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGTATTAATGATGAT  111
V  94.6% (211/223)  IGHV3-74*01  73   ..........C.T.......C...............................................................AG....  162
                                       S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  N  S  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  S  F  R  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  H  A  K  N  M  L  Y  L  Q  M  N 
                    Query_1924   112  GGGAGTTTCAGAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACCACGCCAAGAACATGCTGTATCTGCAAATGAAC  201
V  94.6% (211/223)  IGHV3-74*01  163  ......AG..C..............................................A............C...................  252
                                       G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><-------------------CDR3-IMGT------------------>      
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  S  S  G  W  Y  G  I  D  Y  F  E  Y  W  G 
                    Query_1924   202  AGTCTGAGAGCCGAGGACACGGCTGTATATTATTGTGCAAGAGTAGGGAGCAGTGGCTGGTACGGGATAGACTACTTTGAATACTGGGGC  291
V  94.6% (211/223)  IGHV3-74*01  253  ..........................G.....C..........-----------------------------------------------  295
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  100.0% (15/15)   IGHD6-19*01  7    ------------------------------------------------...............---------------------------  21
J  95.8% (46/48)    IGHJ4*02     1    ----------------------------------------------------------------------..........C.........  20

                                                                  
                                       Q  G  A  L  V  T  V  S  S  
                    Query_1924   292  CAGGGAGCCCTGGTCACCGTCTCCTCAG  319
J  95.8% (46/48)    IGHJ4*02     21   ......A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_101525

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           386     1e-109
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTTCTTTGACTAC	ARRIAVANTGHFFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  R  P  G  E  S  L  K  I  S  C  K  G  S  G  F  T  F  T  S  C
                    Query_1925   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAGGCCGGGGGAGTCCCTGAAGATCTCTTGTAAGGGTTCTGGATTCACCTTTACCAGCTG  90
V  92.7% (268/289)  IGHV5-51*03  6    ................................A............T...........C................A..G...........A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_1925   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  92.7% (268/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  R  S  I  T  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  P  A
                    Query_1925   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAGGTCCATCACGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACCCCGC  270
V  92.7% (268/289)  IGHV5-51*03  186  ...............G...................A........GC...........G...............A.....T.....A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        F  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1925   271  CTTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  92.7% (268/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  97.9% (47/48)    IGHJ4*02     1    --------------------------------------------...A..........................................  46

                                        
                                        
                    Query_1925   361  AG  362
J  97.9% (47/48)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_90407

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD2-21*01                                                                                           10.3    122   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TCTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTCTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFLQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_1926   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTTCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (240/248)  IGHV4-31*03  49   ...............................G..C......C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1926   91   CTGGAATGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCT  180
V  96.8% (240/248)  IGHV4-31*03  139  .....G..........................................C......................C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  L  Q  E 
                    Query_1926   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTTCTCTATTTCTCCAAGAA  270
V  96.8% (240/248)  IGHV4-31*03  229  ..........................C.........................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD2-21*01  22   ---------------------------------------------------------------------------.....----------  26

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1926   271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_251254

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1927   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*02  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_1927   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*02  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_1927   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*02  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_1927   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_194980

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            307     1e-85
IGHD2-21*02                                                                                           18.0    0.59 
IGHJ3*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAGGAGTCAGCA	GGTGGTGAC	AGGGCG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCAGGAGTCAGCAGGTGGTGACAGGGCGGCTTTTGATATC	ARDQESAGGDRAAFDI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	46	5	0	90.2
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	100	14	0	87.7
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	222	26	0	89.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  K  S  N  W  W  F  W  V  R  Q  S  P  G  K  G  L 
                    Query_1928   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGGGGCTCCATCAGTAAAAGTAACTGGTGGTTTTGGGTCCGCCAGTCCCCGGGGAAGGGGCTG  90
V  89.5% (222/248)  IGHV4-4*01   49   ..................G..........T...........C.GT............AG.............C....A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  K  I  Y  H  S  G  T  T  D  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  K  S  R 
                    Query_1928   91   GAGTGGATTGGGAAAATCTACCATAGTGGGACCACCGACTACAACCCGTCCCTCAAGAGTCGAGTCACTATGTCAGTTGACAAGTCGAGG  180
V  89.5% (222/248)  IGHV4-4*01   139  ............G.......T..........G....A...............................C..A.....A........C.A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  F  F  S  L  K  L  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  D  Q  E  S  A  G  G  D 
                    Query_1928   181  AACTTTTTCTCCCTGAAGTTGAGGTCTGTGACCGCCGCGGACACGGCCATATATTTCTGTGCGAGAGACCAGGAGTCAGCAGGTGGTGAC  270
V  89.5% (222/248)  IGHV4-4*01   229  ...CAG............C....C........................G.G....G............----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (9/9)     IGHD2-21*02  11   ---------------------------------------------------------------------------------.........  19

                                      ----------------->                                  
                                       R  A  A  F  D  I  W  G  R  G  T  M  V  I  V  S  S  
                    Query_1928   271  AGGGCGGCTTTTGATATCTGGGGCCGAGGGACAATGGTCATCGTCTCTTCAG  322
J  95.7% (44/46)    IGHJ3*02     5    ------...................A..............C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_194981

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           369     2e-104
IGHD3-3*01                                                                                            33.4    1e-05 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCCATCTTGGCGG	TTACGCTTATTGGAGTGGTTATT	CCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCCATCTTGGCGGTTACGCTTATTGGAGTGGTTATTCCCTTGACTAC	ARDPHLGGYAYWSGYSLDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1929   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (243/250)  IGHV3-33*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  S  N  K  Y  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1929   91   AGTGGGTGGCAATTATATGGTATGATGGAAGTAATAAATATCATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  97.2% (243/250)  IGHV3-33*01  137  ...........G............................CT................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  G  D  D  T  A  V  Y  F  C  A  R  D  P  H  L  G  G  Y  
                    Query_1929   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGGCGACGACACGGCTGTGTATTTCTGTGCGAGAGATCCCCATCTTGGCGGTTACG  270
V  97.2% (243/250)  IGHV3-33*01  227  ....................................C...G................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.3% (21/23)    IGHD3-3*01   4    -------------------------------------------------------------------------------------.....  8

                                      -IMGT----------------------->                                  
                                      A  Y  W  S  G  Y  S  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1929   271  CTTATTGGAGTGGTTATTCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  91.3% (21/23)    IGHD3-3*01   9    A..T..............---------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_249156

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           364     5e-103
IGHD3-10*01                                                                                           14.1    8.1   
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCCC	TCGGGGA	ATT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCCCTCGGGGAATTTGCTTTTGATATC	AKPLGEFAFDI	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	29	28	28	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  E
                    Query_1930   2    GTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGA  91
V  97.2% (240/247)  IGHV3-23*01  48   ........................................................G.................................  137
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E

                                      ------------><-------CDR2-IMGT------><----------------------------------------------------
                                        W  V  S  N  I  N  G  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K
                    Query_1930   92   GTGGGTCTCAAATATTAATGGTGGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAA  181
V  97.2% (240/247)  IGHV3-23*01  138  ..........GC.....G....A...................................................................  227
                                        W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K

                                      FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT--------
                                        N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  L  G  E  F  A  F  D
                    Query_1930   182  GAACACGCTGTATCTGCAAATGAACAGCCTGAGGGCCGAGGACACGGCCGTTTATTACTGTGCGAAACCCCTCGGGGAATTTGCTTTTGA  271
V  97.2% (240/247)  IGHV3-23*01  228  .................................A.................A...............-----------------------  294
                                        N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                        
D  100.0% (7/7)     IGHD3-10*01  14   -----------------------------------------------------------------------.......------------  20
J  100.0% (47/47)   IGHJ3*02     4    ---------------------------------------------------------------------------------.........  12

                                      --->                                  
                                        I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_1930   272  TATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  309
J  100.0% (47/47)   IGHJ3*02     13   ......................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_194983

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           364     5e-103
IGHD2-15*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGC	ATTGTAATGGT	AACAGGTGTTGGGG	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGCATTGTAATGGTAACAGGTGTTGGGGCGTC	ARDRHCNGNRCWGV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1931   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAACAACTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (240/247)  IGHV3-53*01  47   .............................................G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  I  Y  S  G  G  T  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  
                    Query_1931   91   AGTGGGTCTCACTTATTTATAGCGGTGGTACCACACACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGA  180
V  97.2% (240/247)  IGHV3-53*01  137  ...........G..................G....T...................................................A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  R  H  C  N  G  N  R  
                    Query_1931   181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGATAGGCATTGTAATGGTAACAGGT  270
V  97.2% (240/247)  IGHV3-53*01  227  .................................C.................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  90.9% (10/11)    IGHD2-15*01  6    ------------------------------------------------------------------------......G....-------  16

                                      ---------->                                 
                                      C  W  G  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1931   271  GTTGGGGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (37/37)   IGHJ6*02     26   -------.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_194984

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD2-2*01                                                                                            21.8    0.040
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACAAACTGCTA	CTATCAA	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACAAACTGCTACTATCAAATGGACGTC	ARVDCSSTNCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  H  G  Q  G  L  E 
                    Query_1932   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCACGGGCAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   .............................T..........G.AG.T...........................CA...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  N  N 
                    Query_1932   91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAGTACAACCCCTCCCTCAAGGGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C..................A....A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  N  C  Y 
                    Query_1932   181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACAAACTGCTAC  270
V  90.6% (221/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  85.0% (17/20)    IGHD2-2*01   8    ---------------------------------------------------------------------........T..C.G......-  27

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  R  G  T  K  V  I  V  S  S 
                    Query_1932   271  TATCAAATGGACGTCTGGGGCCGAGGGACCAAGGTCATCGTCTCCTCA  318
J  92.9% (39/42)    IGHJ6*02     21   ------................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_194985

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         389     2e-110
IGHD4-4*01                                                                                            14.1    9.4   
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-4*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATAGAGAC	GACTATAGTA	CGTCGTCCTC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAGAGACGACTATAGTACGTCGTCCTCCGACCCC	ARHRDDYSTSSSDP	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  A  N  H
                    Query_1933     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCAGGATACAGCTTTGCTAATCA  90
V  93.1% (269/289)  IGHV5-10-1*01  6    .....................................................................T............A.C.GCT.  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  M  L  D  P  S  D  S  Y  S  N  Y  S  P
                    Query_1933     91   CTGGATCACCTGGGTCCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGATGCTTGATCCCAGTGACTCTTATAGCAACTACAGTCC  180
V  93.1% (269/289)  IGHV5-10-1*01  96   ........G......G......A..............................G.A.......T.............C.........C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  F  S  A  D  K  T  I  N  T  A  Y  L  H  W  S  S  L  K  A  S  D  T  A
                    Query_1933     181  GTCCTTCCAAGGCCACGTCACCTTCTCAGCTGACAAGACCATCAACACTGCCTACCTACATTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.1% (269/289)  IGHV5-10-1*01  186  ......................A..............T......G............G..G.............................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------CDR3-IMGT--------------->                                  
                                          I  Y  Y  C  A  R  H  R  D  D  Y  S  T  S  S  S  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1933     271  CATATATTACTGTGCGAGACATAGAGACGACTATAGTACGTCGTCCTCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.1% (269/289)  IGHV5-10-1*01  276  ...G...............----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                       
D  90.0% (9/10)     IGHD4-4*01     2    ----------------------------.....C....---------------------------------------------------  11
J  100.0% (41/41)   IGHJ5*02       11   ------------------------------------------------.........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_194986

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           389     2e-110
IGHD3-3*01                                                                                            19.9    0.17  
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCA	GAGTGCTTATTAT	TT	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGATCAGAGTGCTTATTATTTCAACTACTTCGACCCC	TRDQSAYYFNYFDP	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	6	2	0	75
Total	N/A	N/A	291	270	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  T  V  S  C  K  A  S  G  Y  T  F  I  N  Y
                    Query_1934   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGACGGTCTCCTGCAAGGCATCTGGATACACGTTCATCAACTA  90
V  92.8% (270/291)  IGHV1-46*01  6    ..................G.............A.................A...T.......................C....C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  T  G  I  I  H  P  S  A  G  T  T  Y  Y  A  R
                    Query_1934   91   CTATATACACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGACGGGAATAATCCACCCTAGTGCTGGTACCACATACTACGCACG  180
V  92.8% (270/291)  IGHV1-46*01  96   ......G........................................T..........A.........G.....G....AG........A  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_1934   181  GAAATTCCAGGGCAGAGTCACCATGACCACGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGTAGCCTGAGATCTGAGGACACGGC  270
V  92.8% (270/291)  IGHV1-46*01  186  ...G.........................G....................................C.......................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  T  R  D  Q  S  A  Y  Y  F  N  Y  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1934   271  CGTTTATTACTGTACAAGAGATCAGAGTGCTTATTATTTCAACTACTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  92.8% (270/291)  IGHV1-46*01  276  ...G.........G.G.....--------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                       
D  92.3% (12/13)    IGHD3-3*01   16   ------------------------.....G.......----------------------------------------------------  28
J  96.0% (48/50)    IGHJ5*02     2    ---------------------------------------.....GG...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_194988

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           402     3e-114
IGHD3-10*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGGAT	GGGAGTTA	CGAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATGGGAGTTACGAAACTTTGACTAC	ARGGWELRNFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_1935   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACAGCTTCACCAACTA  90
V  94.5% (273/289)  IGHV5-51*03  6    ....................C.............................................T..............T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  G  M  W  I  I  Y  P  G  D  S  D  A  T  Y  S  P
                    Query_1935   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGGGGATGTGGATCATCTATCCTGGTGACTCTGATGCCACATACAGCCC  180
V  94.5% (273/289)  IGHV5-51*03  96   ...........................................T.....G..........................A...G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  L  R  G  Q  V  P  I  S  A  D  M  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  G  T  A
                    Query_1935   181  GTCCCTCCGAGGCCAGGTCCCCATCTCAGCCGACATGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGGCACCGC  270
V  94.5% (273/289)  IGHV5-51*03  186  ....T...A..........A...............A........G......................................A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  F  C  A  R  G  G  W  E  L  R  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1935   271  CATCTATTTCTGTGCGAGAGGGGGATGGGAGTTACGAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  94.5% (273/289)  IGHV5-51*03  276  ...G....A..........----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD3-10*01  17   --------------------------........-------------------------------------------------  24
J  100.0% (45/45)   IGHJ4*02     4    --------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_194989

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD1-1*01                                                                                            14.1    9.2   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAGGGGG	CAACTGG	GACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTAC	ARGGGNWDPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	269	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  Y
                    Query_1936   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCTA  90
V  93.4% (269/288)  IGHV5-51*01  6    .................................................................G............C......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  V  V  Y  P  D  D  S  D  A  R  Y  S  P
                    Query_1936   91   CTGGATCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGGTCGTCTATCCTGATGACTCTGATGCCAGATACAGCCC  180
V  93.4% (269/288)  IGHV5-51*01  96   ..................C..G.........A..........G.........A..A.........G..........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  I  T  I  S  A  D  K  S  I  S  T  A  F  L  Q  W  N  S  L  K  A  S  D  P  A
                    Query_1936   181  GTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACCCCGC  270
V  93.4% (269/288)  IGHV5-51*01  186  .......C.......GG....................................A...........G...................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  G  N  W  D  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1936   271  CATCTATTACTGTGCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.4% (269/288)  IGHV5-51*01  276  ...G..............-----------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------.......-------------------------------------------------  11
J  100.0% (44/44)   IGHJ4*02     5    ---------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_265741

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           357     1e-100
IGHD6-13*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTT	TATAACAGCAGTTGG	GTGCTCGA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTTATAACAGCAGTTGGGTGCTCGATGACTTC	ARDFYNSSWVLDDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  I  Y  S  M  N  W  V  R  *  A  P  G  K  G  L  
                    Query_1937   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAATCTATAGCATGAACTGGGTCCGCTAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-21*01  47   ...........................................T.G......................C.....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  T  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1937   91   AGTGGGTCTCATCCATTAGTAGTAGTACTAGTTACATATATTATGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (239/250)  IGHV3-21*01  137  ...........................G............C..C..............................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  R  S  L  Y  L  H  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  Y  N  S  S  W  
                    Query_1937   181  AGAGATCACTGTATCTGCACATGAACAACCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGATTTTTATAACAGCAGTTGGG  270
V  95.6% (239/250)  IGHV3-21*01  227  ...AC..............A.......G........................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD6-13*01  4    --------------------------------------------------------------------------....G......C...-  18

                                      ------------->                                
                                      V  L  D  D  F  W  G  Q  G  A  L  V  T  V  S  S
                    Query_1937   271  TGCTCGATGACTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTC  316
J  94.9% (37/39)    IGHJ4*02     8    -------.....A.............A...................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_138191

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            333     1e-93
IGHD3-3*02                                                                                            12.2    31   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTT	GCATTT	CGATCTCCCACGAGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGCATTTCGATCTCCCACGAGGCATGGACGTC	ARLHFDLPRGMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  T  Y  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_1938  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGGGGCTCCATCACCAGTACTTACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  93.5% (229/245)  IGHV4-4*01  49   ..................G....C.....T..........G.....G.A.........G...........................G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  S  G  S  P  H  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_1938  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCCCCCACTACAGTCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  93.5% (229/245)  IGHV4-4*01  139  .................................A..A......AC.............................................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                      N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  W  C  A  R  L  H  F  D  L  P  R  G 
                    Query_1938  181  AACCAGTTCTCCCTGAAGTTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTGGTGTGCGAGGTTGCATTTCGATCTCCCACGAGGC  270
V  93.5% (229/245)  IGHV4-4*01  229  ..................C....C.............................T..C........-------------------------  293
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  100.0% (6/6)     IGHD3-3*02  7    --------------------------------------------------------------------......----------------  12

                                     -------->                                 
                                      M  D  V  W  G  Q  G  T  T  A  I  V  S  S 
                    Query_1938  271  ATGGACGTCTGGGGCCAAGGGACCACGGCCATCGTCTCCTCA  312
J  95.2% (40/42)    IGHJ6*02    21   ............................T..C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_79887

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_1939   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1939   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_1939   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1939   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_220076

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           339     2e-95
IGHD1-1*01                                                                                            10.3    118  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTA	GTACCCAACCCCGATGGCA	ACAAC	CTA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGTACCCAACCCCGATGGCAACAACCTACC	STQPRWQQPT	249	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	249	1	1	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  N  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1940   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACTTTCAGTAATGCCTGGATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-15*01  47   .......T.............C........................C..........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  H  I  K  S  K  I  D  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_1940   91   AGTGGGTTGGCCATATTAAAAGCAAAATTGATGGTGAGACAACAGACTACGCTGCACCCGTGAAGGGCAGATTCACCATCTCAAGAGATG  180
V  93.6% (233/249)  IGHV3-15*01  137  ............G..............C........G...........................A.........................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--
                                      D  S  K  K  T  L  Y  L  Q  M  N  S  L  E  T  E  D  T  A  L  Y  Y  C  S  T  Q  P  R  W  Q  
                    Query_1940   181  ATTCAAAAAAAACGCTGTATTTGCAGATGAACAGCCTGGAAACCGAGGACACAGCCCTTTACTACTGTAGTACCCAACCCCGATGGCAAC  270
V  93.6% (233/249)  IGHV3-15*01  227  ..........C.........C....A............A.................G.G..T.......---------------------  295
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  100.0% (5/5)     IGHD1-1*01   4    ----------------------------------------------------------------------------------------..  5

                                      ------->                                  
                                      Q  P  T  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1940   271  AACCTACCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
D  100.0% (5/5)     IGHD1-1*01   6    ...---------------------------------------  8
J  100.0% (36/36)   IGHJ5*02     16   ------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_226890

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           290     2e-80
IGHD2-8*01                                                                                            14.1    8.8  
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGGAGGGGGCTGCGGGAA	TGTACTA	TAACGGACGGCGGGGAATCAG	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGGAGGGGGCTGCGGGAATGTACTATAACGGACGGCGGGGAATCAGGGACGTC	ARLEGAAGMYYNGRRGIRDV	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	101	13	0	88.6
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	216	31	0	87.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  R  R  N  T  D  F  W  V  W  I  R  Q  P  P  G  K  G  
                    Query_1941   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGGAGGAATACTGACTTCTGGGTCTGGATCCGGCAGCCCCCCGGGAAGGGGC  93
V  87.4% (216/247)  IGHV4-39*01  50   .....TCC...A............................C..T.G..G.T...A.....G.........C........A..........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  A  I  H  Y  T  G  S  T  Y  Y  N  S  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_1941   94   TGGAGTGGATTGGGGCGATCCATTATACTGGGAGCACCTATTACAACTCGTCCCTCAAGAGTCGAGTCACCATCTCCGTGGACACGTCCA  183
V  87.4% (216/247)  IGHV4-39*01  140  ..............AGT...T......G............C......C.........................A.....A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      R  N  Q  F  S  L  N  L  R  S  V  T  A  T  D  T  S  V  F  Y  C  A  R  L  E  G  A  A  G  M  
                    Query_1941   184  GGAACCAGTTCTCCCTGAACCTAAGGTCTGTGACCGCCACAGACACGTCTGTTTTCTACTGTGCGAGGCTGGAGGGGGCTGCGGGAATGT  273
V  87.4% (216/247)  IGHV4-39*01  230  A..................G..G..C............G........G....G.AT...........-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-8*01   8    ---------------------------------------------------------------------------------------...  10

                                      R3-IMGT------------------------>                                 
                                      Y  Y  N  G  R  R  G  I  R  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_1941   274  ACTATAACGGACGGCGGGGAATCAGGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  338
D  100.0% (7/7)     IGHD2-8*01   11   ....-------------------------------------------------------------  14
J  97.5% (39/40)    IGHJ6*02     23   -------------------------......................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_272184

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           389     2e-110
IGHD3-10*01                                                                                           19.9    0.18  
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGTT	TTACTATGGCTCG	CCCGTAGT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGTTTTACTATGGCTCGCCCGTAGTCTGGTACTTCGACCTC	ARDRFYYGSPVVWYFDL	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	270	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  T  F  S  D  Y
                    Query_1942   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAGCGACTA  90
V  92.8% (270/291)  IGHV1-69*01  6    ..................G.......................................................G..........AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  Q  I  V  P  V  F  G  T  T  T  Y  A  E
                    Query_1942   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACAGATCGTCCCTGTCTTTGGTACGACAACCTACGCAGA  180
V  92.8% (270/291)  IGHV1-69*01  96   ....................................................GG....A.....A..........AG...A.......C.  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        D  L  Q  G  R  V  K  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_1942   181  GGACTTACAGGGCAGAGTCAAAATCACCGCGGACGAATCCACTAGCACAGCCTACATGGAGCTGAGTAGCCTGAGATCTGAGGACACGGC  270
V  92.8% (270/291)  IGHV1-69*01  186  .A.G..C.............CG..T.................G.......................C.......................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  D  R  F  Y  Y  G  S  P  V  V  W  Y  F  D  L  W  G  R  G  T  L  V  T  V
                    Query_1942   271  CGTCTATTACTGTGCGAGAGATCGGTTTTACTATGGCTCGCCCGTAGTCTGGTACTTCGACCTCTGGGGCCGTGGCACCCTGGTCACTGT  360
V  92.8% (270/291)  IGHV1-69*01  276  ...G.................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  92.3% (12/13)    IGHD3-10*01  4    ---------------------------.........T...--------------------------------------------------  16
J  98.0% (49/50)    IGHJ2*01     4    ------------------------------------------------............T.............................  45

                                              
                                        S  S  
                    Query_1942   361  CTCCTCAG  368
J  98.0% (49/50)    IGHJ2*01     46   ........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_301389

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	282	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  
                    Query_1943   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCA  91
V  95.6% (282/295)  IGHV5-51*01  2    .................................A...................................G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  S  D  S  D  I  R  Y  
                    Query_1943   92   ACTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTAGTGACTCTGATATCAGATACA  181
V  95.6% (282/295)  IGHV5-51*01  92   G...........G...........................C....................C......G............C........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  
                    Query_1943   182  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACA  271
V  95.6% (282/295)  IGHV5-51*01  182  ...........C.....................................C...........G......A.....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  
                    Query_1943   272  CCGCCATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  361
V  95.6% (282/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  92.9% (13/14)    IGHD1-26*01  4    ---------------------------------..........C...-------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    --------------------------------------------------.......A................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_1943   362  CGGTCACCGTCTCCTCA  378
J  98.2% (56/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_143058

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD5-18*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTCCG	ACACCTATGGTTAC	GAGTCCCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACTCCGACACCTATGGTTACGAGTCCCTCTTTGACTAC	AKDSDTYGYESLFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1944   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTATGCCCTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   .............................................G.......A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  G  G  A  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1944   91   AGTGGGTCTCAACTATTAGTGGTAGTGGTGGTGCCACGTACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCC  180
V  94.0% (235/250)  IGHV3-23*01  137  ...........G....................AG...A...................................................A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  D  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  K  D  S  D  T  Y  G  Y  
                    Query_1944   181  GGGACTCGTTGTTTCTACAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTATATTTCTGTGCGAAAGACTCCGACACCTATGGTTACG  270
V  94.0% (235/250)  IGHV3-23*01  227  A.A..A..C...A...G...................C....................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD5-18*01  7    ---------------------------------------------------------------------------...G..........-  20

                                      ---------------->                                  
                                      E  S  L  F  D  Y  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_1944   271  AGTCCCTCTTTGACTACTGGGGCCAGGGAACCCTGGCCACCGTCTCCTCAG  321
J  97.7% (43/44)    IGHJ4*02     5    -------.............................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_89759

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           372     2e-105
IGHD6-19*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTCGCGCACAA	GGTATCCCAGTGGC	CCCA	TTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTCGCGCACAAGGTATCCCAGTGGCCCCATTGAATAC	ARGSRTRYPSGPIEY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	264	26	0	91


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  E  A  S  G  Y  S  F  T  T  Y
                    Query_1945   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAACCTGGGGCCTCAGTGAAGGTTTCTTGCGAGGCTTCTGGATACTCCTTCACCACTTA  90
V  91.0% (264/290)  IGHV1-46*01  6    ..................G..............G.......................C...A....A.........A.........GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  Q  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  N  P  S  D  G  D  T  N  Y  A  Q
                    Query_1945   91   CTATATACAGTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGAGTAATCAATCCTAGTGATGGAGACACAAACTACGCACA  180
V  91.0% (264/290)  IGHV1-46*01  96   ......G..C.......................A..................A.......C.......G...TAG.....G.........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  S  D  S  S  A  S  T  F  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_1945   181  GAAATTCCAGGGCAGAGTCACCATGACCAGCGACTCGTCCGCGAGTACATTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  91.0% (264/290)  IGHV1-46*01  186  ...G..........................G...A.....A....C...G........................................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  H  C  A  R  G  S  R  T  R  Y  P  S  G  P  I  E  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1945   271  CGTCTATCACTGTGCGAGAGGTTCGCGCACAAGGTATCCCAGTGGCCCCATTGAATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  91.0% (264/290)  IGHV1-46*01  276  ...G...T............----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD6-19*01  2    --------------------------------.....AG.......--------------------------------------------  15
J  97.6% (41/42)    IGHJ4*02     7    --------------------------------------------------....C...................................  46

                                        
                                        
                    Query_1945   361  AG  362
J  97.6% (41/42)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_89758

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           355     3e-100
IGHD3-10*01                                                                                           21.8    0.043 
IGHJ5*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GAGGAGTCGCGGCGTCCCCTT	TTACTTTGGTTTGGGGA	CTTCTGGAGGA	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAGGAGTCGCGGCGTCCCCTTTTACTTTGGTTTGGGGACTTCTGGAGGATGGTTCGACCCC	ARGRSRGVPFYFGLGTSGGWFDP	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1946   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGCTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  96.3% (236/245)  IGHV4-34*01  49   ...........................................G............C.................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1946   91   TGGATTGGCGAAATCAACCATAGTGGCAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCTGTAGACACGTCCAAGAAC  180
V  96.3% (236/245)  IGHV4-34*01  139  ........G........T........A............................................A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  G  R  S  R  G  V  P  F  Y 
                    Query_1946   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACTCGGCTGTGTATTACTGTGCGAGAGGGAGGAGTCGCGGCGTCCCCTTTTAC  270
V  96.3% (236/245)  IGHV4-34*01  229  ...................G...............G...A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  88.2% (15/17)    IGHD3-10*01  4    --------------------------------------------------------------------------------------....  7

                                      3-IMGT----------------------------->                                  
                                       F  G  L  G  T  S  G  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1946   271  TTTGGTTTGGGGACTTCTGGAGGATGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  88.2% (15/17)    IGHD3-10*01  8    .A.....C.....---------------------------------------------------------  20
J  100.0% (46/46)   IGHJ5*02     6    ------------------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_92172

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           282     4e-78
IGHD3-16*01                                                                                           18.0    0.60 
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACAACG	TATGCTTAT	GTCAGTGCTTGGGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAACGTATGCTTATGTCAGTGCTTGGGGATGATGCTTTTGATGTC	ARRQRMLMSVLGDDAFDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  V  T  T  T  R  Y  S  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_1947   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCGTCACCACTACTAGATACTCCTGGGGTTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  86.0% (215/250)  IGHV4-39*01  49   ...............................G....A...G..G..G...T....A......C..........................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Q  M  F  Y  G  G  S  T  Y  Q  N  P  S  L  N  S  R  V  T  V  S  V  D  P  S 
                    Query_1947   91   CTGGAATGGATTGGGCAGATGTTCTATGGTGGGAGCACGTACCAGAACCCGTCGCTGAATAGTCGAGTCACCGTGTCCGTTGACCCGTCC  180
V  86.0% (215/250)  IGHV4-39*01  139  .....G.........AGT..C.AT...A..........C...T.C........C..C..G............A.A.....A...A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  S  Q  F  F  L  N  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  R  Q  R  M  L  M  S 
                    Query_1947   181  AAGAGTCAGTTCTTCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCTGTATATTATTGTGCGAGACGACAACGTATGCTTATGTCA  270
V  86.0% (215/250)  IGHV4-39*01  229  ....AC.......C......G....G...................A.......G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  26   -----------------------------------------------------------------------------.........----  34

                                      -IMGT--------------------->                                  
                                       V  L  G  D  D  A  F  D  V  W  G  Q  G  T  G  V  T  V  S  S  
                    Query_1947   271  GTGCTTGGGGATGATGCTTTTGATGTCTGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  331
J  96.0% (48/50)    IGHJ3*01     1    -----------...............................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_33001

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            358     4e-101
IGHD6-19*01                                                                                           14.1    8.5   
IGHJ6*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTCTAATAA	TGGCTGG	GGCCCCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCTCTAATAATGGCTGGGGCCCCGACTACTACGGCTTGGACGTC	ASSNNGWGPDYYGLDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  P  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1948   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAGTCCCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (238/247)  IGHV3-7*03   47   ....................................C.......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1948   91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (238/247)  IGHV3-7*03   137  ....................C.....................................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  S  N  N  G  W  G  P  
                    Query_1948   181  AGAATTCACTGTATTTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTATTGTGCGAGCTCTAATAATGGCTGGGGCCCCG  270
V  96.4% (238/247)  IGHV3-7*03   227  ....C.........C....A................................G.....C........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD6-19*01  12   ----------------------------------------------------------------------------.......-------  18

                                      T------------------>                              
                                      D  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_1948   271  ACTACTACGGCTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  320
J  96.0% (48/50)    IGHJ6*02     10   ..........TA......................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_217788

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD1-26*01                                                                                           23.8    0.012
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTTAAGATGCCAGACC	AGTGGGAACTACTAC	GGGG	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTTAAGATGCCAGACCAGTGGGAACTACTACGGGGTTACTACTACTACTACGATATGGACGTC	AKDLKMPDQWELLRGYYYYYDMDV	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  F  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1949   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGGTCCTTTGCCATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   ...........................................CAG..A........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  G  S  G  I  S  G  S  G  G  N  T  Y  Y  A  D  S  V  K  G  R  F  T  M  S  R  D  N  S  
                    Query_1949   91   AGTGGGGATCAGGTATTAGTGGTAGTGGTGGTAACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATGTCCAGAGACAATTCGA  180
V  92.8% (232/250)  IGHV3-23*01  137  ......TC....C....................G.......................................C..............C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  E  T  L  R  A  E  D  T  A  V  Y  F  C  A  K  D  L  K  M  P  D  Q  
                    Query_1949   181  AGAACACGCTATATCTGCAAATGGAAACCCTGAGAGCCGAGGACACGGCCGTATACTTCTGTGCGAAAGATCTTAAGATGCCAGACCAGT  270
V  92.8% (232/250)  IGHV3-23*01  227  ..........G............A.C.G...........................T.A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (14/15)    IGHD1-26*01  6    ---------------------------------------------------------------------------------------...  8

                                      ----CDR3-IMGT------------------------------>                                 
                                      W  E  L  L  R  G  Y  Y  Y  Y  Y  D  M  D  V  W  G  R  G  T  S  V  T  V  S  S 
                    Query_1949   271  GGGAACTACTACGGGGTTACTACTACTACTACGATATGGACGTCTGGGGCCGAGGGACCTCGGTCACCGTCTCCTCA  347
D  93.3% (14/15)    IGHD1-26*01  9    ....G.......-----------------------------------------------------------------  20
J  95.1% (58/61)    IGHJ6*02     2    ----------------.................G.................A.......A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_89751

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           297     7e-83
IGHD3-10*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GGG	CTATGCTTCGGGGAGTCATT	TCAAATCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGGGCTATGCTTCGGGGAGTCATTTCAAATCTCACTTTGACTAC	AKEGYASGSHFKSHFDY	230	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	47	4	0	92.2
CDR2-IMGT	92	115	24	18	6	0	75
FR3-IMGT	116	229	114	109	5	0	95.6
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	207	17	0	92.4


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  T  P  G  Q  G  L  E  W  L  A  V  V  S  S  D 
                    Query_1950   14   TCTGGATTCACCTTCAGGAGTTATGGCATGCACTGGGTCCGCCAGACTCCAGGCCAGGGACTGGAGTGGCTGGCAGTTGTATCAAGTGAT  103
V  92.4% (207/224)  IGHV3-30*18  73   .................T..C........................G........A....G.........G........A.....TA....  162
                                       S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  S  V  Q  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  Q  N  T  L  Y  L  Q  M  N 
                    Query_1950   104  GGAAGTGTTCAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCCAGAACACGCTGTATCTGCAAATGAAT  193
V  92.4% (207/224)  IGHV3-30*18  163  ......AA.A.....................................................A.........................C  252
                                       G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><--------------------CDR3-IMGT-------------------->   
                                       S  L  R  S  E  D  T  A  V  Y  Y  C  A  K  E  G  Y  A  S  G  S  H  F  K  S  H  F  D  Y  W 
                    Query_1950   194  AGCCTGAGATCTGAGGATACGGCTGTTTATTACTGTGCGAAAGAGGGCTATGCTTCGGGGAGTCATTTCAAATCTCACTTTGACTACTGG  283
V  92.4% (207/224)  IGHV3-30*18  253  .........G.......C........G.................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  90.0% (18/20)    IGHD3-10*01  7    -----------------------------------------------.....G..........T...-----------------------  26
J  100.0% (45/45)   IGHJ4*02     4    ----------------------------------------------------------------------------..............  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_1950   284  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  314
J  100.0% (45/45)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_89750

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         358     4e-101
IGHD3-22*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ATTTTG	TATGTTAGTAGTGGTTATT	CCCTTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAATTTTGTATGTTAGTAGTGGTTATTCCCTTAACTACTTTGACTAC	ARILYVSSGYSLNYFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  V  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_1951     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGT  90
V  96.0% (239/249)  IGHV4-30-4*01  49   ..................A............G.................A.......................................C  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  F  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  Q  I  I  I  S  V  D  T  S 
                    Query_1951     91   CTGGAGTGGATTGGGTTCATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCAAATTATCATATCAGTAGACACGTCC  180
V  96.0% (239/249)  IGHV4-30-4*01  139  ................A...............................................G.G...C...................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  I  L  Y  V  S  S  G 
                    Query_1951     181  AAGAACCAGTTTTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTCTATTACTGTGCCAGAATTTTGTATGTTAGTAGTGGT  270
V  96.0% (239/249)  IGHV4-30-4*01  229  ...........C.........................................G...............---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.7% (18/19)    IGHD3-22*01    8    ---------------------------------------------------------------------------....A..........  22

                                        MGT-------------------->                                  
                                         Y  S  L  N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1951     271  TATTCCCTTAACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  94.7% (18/19)    IGHD3-22*01    23   ....------------------------------------------------------  26
J  100.0% (48/48)   IGHJ4*02       1    ----------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_217784

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           288     5e-80
IGHD3-22*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAC	ATAGTACTGG	CCGAATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATAGTACTGGCCGAATCATTGACTAT	ARAHSTGRIIDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G 
                    Query_1952   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCGGGGAAGGGC  90
V  86.8% (217/250)  IGHV4-31*01  49   ...................C................A...G.A....TGG..A...C....G.............CA...A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  Y  I  Y  H  V  E  S  T  S  R  N  P  S  L  K  S  Q  L  T  I  S  L  D  P  S 
                    Query_1952   91   CTGGAGTGGATGGGATACATCTATCACGTTGAGAGCACCTCCCGCAACCCGTCCCTCAAGAGTCAACTTACCATTTCACTCGACCCGTCT  180
V  86.8% (217/250)  IGHV4-31*01  139  ...........T..G.........T..AG..G........A.TA....................T.G.......A...G.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  S  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  S  T  G  R  I 
                    Query_1952   181  AAGAGCCAGTTCTCCCTAAAACTGACCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCACATAGTACTGGCCGAATC  270
V  86.8% (217/250)  IGHV4-31*01  229  ....A............G..G....G....G.......................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-22*01  12   -------------------------------------------------------------------------......G...-------  21

                                      -------->                                  
                                       I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1952   271  ATTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.6% (41/42)    IGHJ4*02     7    -.......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_89752

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           322     2e-90
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_1953   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_1953   91   CTAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-61*08  139  ..G..................T..T................C.................G.......TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N 
                    Query_1953   181  AGGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTTTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAAC  270
V  91.2% (228/250)  IGHV4-61*08  229  .A.................A.....GC..........................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G..G.....G.  22

                                      3-IMGT----------------------->                                  
                                       C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1953   271  TGCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  86.4% (19/22)    IGHD2-15*01  23   ......----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_89755

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           352     3e-99
IGHD3-3*01                                                                                            43.0    2e-08
IGHJ5*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGGCGAGGCC	GTATTACGACTTTTGGAGTGGTTGTTAT	CGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGCGAGGCCGTATTACGACTTTTGGAGTGGTTGTTATCGGCTGGTTCGACCCC	ARGGRGRITTFGVVVIGWFDP	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	235	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  V  R  Q  S  P  G  K  G  L  E 
                    Query_1954   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTATTATTGGAGCTGGGTCCGCCAGTCTCCAGGGAAGGGGCTGGAA  90
V  95.9% (235/245)  IGHV4-34*01  49   ...............................................C..C.........A........C.C.................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  L  T  T  S  V  D  T  S  K  K 
                    Query_1954   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCACATCAGTAGACACGTCCAAGAAA  180
V  95.9% (235/245)  IGHV4-34*01  139  ............................................................G......T.....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  R  G  R  I  T  T  F 
                    Query_1954   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGGGGCGAGGCCGTATTACGACTTTT  270
V  95.9% (235/245)  IGHV4-34*01  229  ....................C............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  92.9% (26/28)    IGHD3-3*01   1    ----------------------------------------------------------------------------.........T....  14

                                      MGT-------------------------->                                  
                                       G  V  V  V  I  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1954   271  GGAGTGGTTGTTATCGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  334
D  92.9% (26/28)    IGHD3-3*01   15   .........A....--------------------------------------------------  28
J  97.9% (46/47)    IGHJ5*02     5    -----------------..........................................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_217783

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            355     3e-100
IGHD5-18*01                                                                                           23.8    0.011 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	TGGATACAGCCATGG	ACCGGGGTAAGGGCGC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGATACAGCCATGGACCGGGGTAAGGGCGCTATGGACGTC	ARVDTAMDRGKGAMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  N  T  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_1955   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAATACCTACTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-7*01   47   ....................................C.....G..G...T.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  A  N  I  K  Q  D  G  T  E  G  C  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1955   91   ACTGGGTGGCCAACATAAAGCAAGATGGAACTGAGGGATGCTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (238/249)  IGHV3-7*01   137  .G............................G....AA..A..................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  D  T  A  M  D  R  
                    Query_1955   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGTGGATACAGCCATGGACCGGG  270
V  95.6% (238/249)  IGHV3-7*01   227  ....................................................G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD5-18*01  2    ---------------------------------------------------------------------..........T....------  16

                                      T------------------>                                 
                                      G  K  G  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1955   271  GTAAGGGCGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  100.0% (43/43)   IGHJ6*02     20   ----------...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_89757

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           311     4e-87
IGHD3-9*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-9*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGGGCG	ACGATGTTTTGACTGGTTACTAT	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGGGCGACGATGTTTTGACTGGTTACTATCTTGACTAC	RGGATMF*LVTILTT	242	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	241	114	104	9	1	91.2
CDR3-IMGT (germline)	242	246	5	5	0	0	100
Total	N/A	N/A	247	225	21	1	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  S  T  F  S  S  D  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1956   1    GGTCCCTGAGACTCTCCTGTGTTGCCTCTGGATCCACCTTCAGTAGCGACACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (225/247)  IGHV3-21*01  47   .....................CA..........T.............T.T.G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  S  T  S  T  Y  K  Y  Y  G  E  S  V   R  A  D  S  P  S  P  E  T  T  P 
                    Query_1956   91   AGTGGGTCTCAGGCATTAGCAGTACTAGTACTTACAAATATTATGGTGAGTCAGTG-AGGGCCGATTCACCATCTCCAGAGACAACACCA  179
V  91.1% (225/247)  IGHV3-21*01  137  ...........TC......T....G.....G.....T...C..C.CA..C......A.............................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                       R  T  Q  C  I  Y  K  *  T  A  *  E  P  R  T  R  L  C  I  I  V  R  G  G  A  T  M  F  *  L 
                    Query_1956   180  AGAACTCAGTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGGGGGGGCGACGATGTTTTGACTG  269
V  91.1% (225/247)  IGHV3-21*01  227  ........C.......G.........................................C........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  91.3% (21/23)    IGHD3-9*01   6    ---------------------------------------------------------------------------.....A.........  20

                                      ---------------->                                  
                                       V  T  I  L  T  T  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_1956   270  GTTACTATCTTGACTACTGGGGCCAGGGAACCGTGGTCACCGTCTCCTCAG  320
D  91.3% (21/23)    IGHD3-9*01   21   ....T...-------------------------------------------  28
J  97.6% (41/42)    IGHJ4*02     7    ---------.......................C..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_89756

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           396     2e-112
IGHD6-19*01                                                                                           21.8    0.046 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAAAG	ATAGTAGTGGCTGG	CACAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAAAGATAGTAGTGGCTGGCACAATTACGGTATGGACGTC	AREKDSSGWHNYGMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  R  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  L  S  S  Y
                    Query_1957   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTGAGTAGCTA  90
V  93.5% (272/291)  IGHV1-69*01  6    ..................G.............A................................................C..C.....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  T  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  G  I  I  P  I  F  R  K  T  D  Y  A  Q
                    Query_1957   91   TGTCACCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCAGGGATCATCCCTATTTTTAGAAAAACAGACTACGCACA  180
V  93.5% (272/291)  IGHV1-69*01  96   ..CT.T............................................G...............C...G.T.C.G..A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  V  D  E  S  T  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  G
                    Query_1957   181  GAAGTTCCAGGGCAGAGTCACGATTACCGTGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGGCTGAGGTCTGACGACACGGG  270
V  93.5% (272/291)  IGHV1-69*01  186  .............................C.......................................C.....A.....G.......C  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  E  K  D  S  S  G  W  H  N  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_1957   271  CGTGTATTACTGTGCGAGAGAAAAAGATAGTAGTGGCTGGCACAATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  93.5% (272/291)  IGHV1-69*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD6-19*01  5    --------------------------....C.........--------------------------------------------------  18
J  100.0% (48/48)   IGHJ6*02     15   ----------------------------------------------............................................  58

                                          
                                        S 
                    Query_1957   361  CTCA  364
J  100.0% (48/48)   IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_242374

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           382     3e-108
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTA	ACGATTT	ACATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACGATTTACATTATGGTATGGACGTC	ARVNDLHYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_1958   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATTCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (247/250)  IGHV4-31*01  49   ...................C................................................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 
                    Query_1958   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (247/250)  IGHV4-31*01  139  ..........................................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  D  L  H  Y  G 
                    Query_1958   181  AAGAACCAGCTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTTAACGATTTACATTATGGT  270
V  98.8% (247/250)  IGHV4-31*01  229  .........T............................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   6    -------------------------------------------------------------------------.......----------  12
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1958   271  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  312
J  100.0% (45/45)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_242377

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAGTTAT	CAGGGT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGGCTCCACCCC	ARSGSGSYQGWLHP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	222	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  P  Y  Y  W  I  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1959   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGTCCTTACTACTGGATCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.7% (222/242)  IGHV4-59*01  49   ..................A............G..........AG...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  H  I  F  Y  T  G  S  T  K  Y  K  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  K 
                    Query_1959   91   TGGCTTGGCCATATCTTTTACACTGGGAGCACCAAATACAAGCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCCAGGAAG  180
V  91.7% (222/242)  IGHV4-59*01  139  ...A....GT......A.....G............C.....C..........................A...G............A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  G  T  A  V  Y  Y  C  A  R  S  G  S  G  S  Y  Q  G  W 
                    Query_1959   181  CAGTTCTCCCTGAAACTGCGTTCTGTGACCGCTGCGGGCACGGCCGTGTATTACTGTGCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGG  270
V  91.7% (222/242)  IGHV4-59*01  229  ..............G...A.C................A........................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (15/15)   IGHD3-10*01  11   ------------------------------------------------------------------...............---------  25
J  87.0% (40/46)    IGHJ5*02     6    ---------------------------------------------------------------------------------------...  8

                                      -------->                                  
                                       L  H  P  W  G  L  G  R  L  V  I  V  S  S  
                    Query_1959   271  CTCCACCCCTGGGGCCTGGGAAGACTGGTCATCGTCTCCTCAG  313
J  87.0% (40/46)    IGHJ5*02     9    T..G............A.....CC.......C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_242376

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGCA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	AGHGDDSGSYLYYFYGMDV	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	69	2	0	97.2
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	297	8	6	2	0	75
Total	N/A	N/A	292	277	15	0	94.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  
                    Query_1960   6    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACT  95
V  94.9% (277/292)  IGHV5-51*01  5    ..............................A...................................G....................G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  
                    Query_1960   96   ACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCC  185
V  94.9% (277/292)  IGHV5-51*01  95   .........G...........................C....................C...................C...........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  H  L  Q  W  G  S  L  K  A  S  D  T  
                    Query_1960   186  CGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCCACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCG  275
V  94.9% (277/292)  IGHV5-51*01  185  ........C.....................................C......T....G......A........................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------------CDR3-IMGT----------------------->                   
                                      A  I  Y  Y  C  A  G  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  
                    Query_1960   276  CCATATATTACTGTGCGGGGCATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGG  365
V  94.9% (277/292)  IGHV5-51*01  275  ....G............A.A..--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  92.9% (13/14)    IGHD1-26*01  4    ------------------------------..........C...----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    -----------------------------------------------.......A...................................  48

                                                    
                                      V  T  V  S  S 
                    Query_1960   366  TCACCGTCTCCTCA  379
J  98.2% (56/57)    IGHJ6*02     49   ..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_242370

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            335     4e-94
IGHD6-25*01                                                                                           10.3    115  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	GGCT	CAGCG	ACAAAACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCAGCGACAAAACCACTTTGACTTC	AAQRQNHFDF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  S  D  Y  G  M  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_1961   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTAGTGATTATGGCATGCAGTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  93.9% (229/244)  IGHV3-9*01   47   ................................T........GA........C......C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  S  N  S  G  N  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1961   91   AGTGGGTCTCAGGTATTAGTTCGAATAGTGGTAATACAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.9% (229/244)  IGHV3-9*01   137  .....................G...........GC.T.....................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  G  E  D  S  A  L  Y  Y  C  A  A  Q  R  Q  N  H  F  D  
                    Query_1961   181  AGAAGTCCCTGTATCTACAAATGAACAGTTTGAGAGGTGAGGACTCGGCCTTATATTACTGTGCGGCTCAGCGACAAAACCACTTTGACT  270
V  93.9% (229/244)  IGHV3-9*01   227  ....C...........G............C......C.......A.......G...........--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (5/5)     IGHD6-25*01  9    --------------------------------------------------------------------.....-----------------  13
J  93.3% (42/45)    IGHJ4*02     4    ---------------------------------------------------------------------------------.........  12

                                      ->                                  
                                      F  W  G  L  G  T  L  V  T  V  S  S  
                    Query_1961   271  TCTGGGGCCTGGGAACTCTGGTCACCGTCTCCTCAG  306
J  93.3% (42/45)    IGHJ4*02     13   A........A......C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_242373

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            353     9e-100
IGHD3-3*01                                                                                            16.1    2.2   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CACACC	TTTTCGAGTGG	CAGGGTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACACCTTTTCGAGTGGCAGGGTCACTTTGACAAC	ATHLFEWQGHFDN	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	236	10	0	95.9


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1962  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTTAGTAGGTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.9% (236/246)  IGHV3-7*01  47   ............................T.................C...........................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  N  Q  D  G  S  E  P  Y  Y  V  D  S  M  R  G  R  F  T  I  S  R  D  N  A  
                    Query_1962  91   AGTGGGTGGCCAACATAAACCAAGACGGAAGTGAGCCATACTATGTGGACTCTATGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.9% (236/246)  IGHV3-7*01  137  ...................G.....T.........AA................G...A................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                     K  N  S  M  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  H  L  F  E  W  Q  G  
                    Query_1962  181  AGAACTCAATGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGACACACCTTTTCGAGTGGCAGGGTC  270
V  95.9% (236/246)  IGHV3-7*01  227  ........C...A.....................................................------------------------  292
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.9% (10/11)    IGHD3-3*01  11   ------------------------------------------------------------------------....G......-------  21

                                     ---------->                                  
                                     H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1962  271  ACTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.8% (44/45)    IGHJ4*02    4    ........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_242379

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           369     2e-104
IGHD3-22*01                                                                                           14.1    8.1   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGGCAAAATAGTT	TGATAGT	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGGCAAAATAGTTTGATAGTCTTTGACTCT	ARGGQNSLIVFDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	240	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1963   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  98.4% (240/244)  IGHV4-59*01  49   ......................................................................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_1963   91   TGGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (240/244)  IGHV4-59*01  139  .........T................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  Q  N  S  L  I  V  F 
                    Query_1963   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGGAGGGCAAAATAGTTTGATAGTCTTT  270
V  98.4% (240/244)  IGHV4-59*01  229  .....................................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-22*01  10   -------------------------------------------------------------------------------.......----  16
J  93.2% (41/44)    IGHJ4*02     5    --------------------------------------------------------------------------------------....  8

                                      ----->                                  
                                       D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_1963   271  GACTCTTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  310
J  93.2% (41/44)    IGHJ4*02     9    ....AC............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_242378

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           367     6e-104
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1964   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1964   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.2% (242/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_1964   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  97.2% (242/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_1964   271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_183809

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           430     1e-122
IGHD6-6*01                                                                                            10.3    137   
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AACG	TCGTC	TTTCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAACGTCGTCTTTCAACTACTTCAACTACGGTATGGACGTC	ARETSSFNYFNYGMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	283	8	0	97.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_1965   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGTTA  90
V  97.3% (283/291)  IGHV1-46*01  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  D  G  D  T  T  Y  A  Q
                    Query_1965   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGATGGTGACACAACCTACGCACA  180
V  97.3% (283/291)  IGHV1-46*01  96   ....................................................................G....AG.....G.........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  L  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_1965   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACACTCTACATGGAGCTTAGCAGCCTGAGATCTGAGGACACGGC  270
V  97.3% (283/291)  IGHV1-46*01  186  .................................................G.............G..........................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  E  T  S  S  F  N  Y  F  N  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_1965   271  CGTGTATTACTGTGCGAGAGAAACGTCGTCTTTCAACTACTTCAACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  97.3% (283/291)  IGHV1-46*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD6-6*01   13   -------------------------.....------------------------------------------------------------  17
J  96.6% (57/59)    IGHJ6*02     4    -----------------------------------......A.T..............................................  58

                                          
                                        S 
                    Query_1965   361  CTCA  364
J  96.6% (57/59)    IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_301381

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD3-16*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	TGGGGGA	TGGCGACAATTCTGACATTTCG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTC	TRVGDGDNSDISYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  I  F
                    Query_1966   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTTAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTAGCATCTT  90
V  95.2% (275/289)  IGHV5-51*01  6    ...........................G.................................................G.....C..G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  I  K  Y  S  P
                    Query_1966   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATATCAAATACAGTCC  180
V  95.2% (275/289)  IGHV5-51*01  96   ....................................................A........................C..G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1966   181  GTCCTTCCAAGGCCAGGTCTCCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTTTGAAGGCCTCGGACACCGC  270
V  95.2% (275/289)  IGHV5-51*01  186  ...................A.................................................CC...................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  T  R  V  G  D  G  D  N  S  D  I  S  Y  G  M  D  V  W  G  Q  G  T  K  V  T  V
                    Query_1966   271  CATCTATTACTGTACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTCTGGGGCCAAGGGACCAAGGTCACCGT  360
V  95.2% (275/289)  IGHV5-51*01  276  ...G.........G.....-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-16*01  17   --------------------.......---------------------------------------------------------------  23
J  95.8% (46/48)    IGHJ6*02     15   -------------------------------------------------.....T.........................C.........  55

                                             
                                        S  S 
                    Query_1966   361  CTCCTCA  367
J  95.8% (46/48)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_193858

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           329     3e-92
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACGATGC	CTACGGT	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATGACGATGCCTACGGTCTTGACTAC	VRDDDAYGLDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  W  M  H  W  V  R  Q  A  P  G  K  G  P  
                    Query_1967   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGACACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCCGG  90
V  92.0% (230/250)  IGHV3-74*01  47   ..............................................CT.......................................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  C  V  A  R  I  K  S  D  G  S  Y  R  D  Y  A  D  F  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1967   91   TGTGCGTCGCACGTATCAAGAGTGATGGGAGTTACAGAGACTACGCGGACTTCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.0% (230/250)  IGHV3-74*01  137  ....G...T.......T..T............AG..C.AG...........C......................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  I  L  Y  L  Q  M  N  S  L  S  A  D  D  T  A  V  Y  Y  C  V  R  D  D  D  A  Y  G  L  
                    Query_1967   181  AGAACATTCTGTATTTGCAAATGAACAGTCTGAGTGCCGACGACACGGCTGTCTATTACTGTGTAAGAGATGACGATGCCTACGGTCTTG  270
V  92.0% (230/250)  IGHV3-74*01  227  ......CG......C...................A.....G...........G..........C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD4-17*01  4    -------------------------------------------------------------------------------.......----  10
J  95.2% (40/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  L  S  S  
                    Query_1967   271  ACTACTGGGGCCAGGGGACCCTGGTCACCCTCTCCTCAG  309
J  95.2% (40/42)    IGHJ4*02     10   ................A............G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_193066

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_1968   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_1968   91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_1968   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_1968   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_193064

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_1969   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.5% (278/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_1969   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  D  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_1969   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCGACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  .......C.....................................C......T....G......A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_1969   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  96.5% (55/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_1969   361  CACCGTCTCATCA  373
J  96.5% (55/57)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_193065

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD5-12*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACGCGGGA	TGGCTAC	AATACCTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACGCGGGATGGCTACAATACCTATTGACTGC	ARGRGMATIPIDC	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  G  T  Y  Y  W  T  W  I  R  R  P  P  G  K  G  L  E  
                    Query_1970   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCGGTACTTACTACTGGACCTGGATCCGGCGGCCCCCAGGGAAGGGACTGGAAT  93
V  91.4% (222/243)  IGHV4-59*01  50   .....TCC...A....C.....................A...G...........G...........A.....................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  T  H  Y  S  G  D  T  N  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  T  S  K  N  
                    Query_1970   94   GGATTGGCTATACTCATTACAGTGGGGACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCATCATATCAGTAGACACGTCCAAGAACC  183
V  91.4% (222/243)  IGHV4-59*01  140  .......G....TCT...........AG...................................C..........................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      L  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  G  M  A  T  I  P  I  
                    Query_1970   184  TGCTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGGACGCGGGATGGCTACAATACCTATTG  273
V  91.4% (222/243)  IGHV4-59*01  230  A.T.........A.......................................C..........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (7/7)     IGHD5-12*01  11   ------------------------------------------------------------------------.......-----------  17
J  97.6% (40/41)    IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                 
                                      D  C  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_1970   274  ACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  311
J  97.6% (40/41)    IGHJ4*02     10   ...A..................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_220078

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           416     2e-118
IGHD5-18*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GTGGACACACCTATGG	AGCCCGAACCGACCCCCATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGGACACACCTATGGAGCCCGAACCGACCCCCATCTTGACTAC	ARRGHTYGARTDPHLDY	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	70	1	0	98.6
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  I  F  R  T  
                    Query_1971   6    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACATCTTTAGAACCC  95
V  95.9% (278/290)  IGHV5-51*03  5    ...................................................A..........................G.....CC.G.T  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      H  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  
                    Query_1971   96   ACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCC  185
V  95.9% (278/290)  IGHV5-51*03  95   .........G................................................................................  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  H  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  
                    Query_1971   186  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACCACTCCATTAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACCCCG  275
V  95.9% (278/290)  IGHV5-51*03  185  ...................................A.G.....C..........................................A...  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><--------------------CDR3-IMGT-------------------->                         
                                      A  I  Y  Y  C  A  R  R  G  H  T  Y  G  A  R  T  D  P  H  L  D  Y  W  G  Q  G  T  L  V  S  
                    Query_1971   276  CCATATATTACTGTGCGAGACGTGGACACACCTATGGAGCCCGAACCGACCCCCATCTTGACTACTGGGGCCAGGGAACCCTGGTCTCCG  365
V  95.9% (278/290)  IGHV5-51*03  275  ....G...............----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  87.5% (14/16)    IGHD5-18*01  1    ---------------------.....T...G......-----------------------------------------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------------.............................A...  39

                                               
                                      V  S  S  
                    Query_1971   366  TCTCCTCAG  374
J  97.6% (41/42)    IGHJ4*02     40   .........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_193061

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAAGACTACTTTGAAGA	TAGTGCTTATTAC	N/A	TTCAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAAGACTACTTTGAAGATAGTGCTTATTACTTCAACCTC	AKDKDYFEDSAYYFNL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  R  R  S  A  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_1972   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTTAGGAGGTCTGCCATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-23*01  47   ....................G......................C..C.A.......A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  E  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_1972   91   AGTGGGTCTCATCTATAAGTGGCAGTGGTGAAAAAACATATTACGCAGACTCCGTGAAGGGCCGCTTCACGATCTCCAGAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-23*01  137  ...........G....T.....T.......GT.GC.....C.......................G.....C...................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  T  S  L  R  A  E  D  M  A  L  Y  Y  C  A  K  D  K  D  Y  F  E  D  
                    Query_1972   181  AGAACACGCTGTATCTACAAATGACCAGCCTGAGAGCCGAGGACATGGCCCTTTATTACTGTGCGAAAGATAAAGACTACTTTGAAGATA  270
V  92.0% (230/250)  IGHV3-23*01  227  ................G.......A....................C....G.A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.3% (12/13)    IGHD3-22*01  16   ----------------------------------------------------------------------------------------..  17

                                      T------------------>                                  
                                      S  A  Y  Y  F  N  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1972   271  GTGCTTATTACTTCAACCTCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  324
D  92.3% (12/13)    IGHD3-22*01  18   ...G.......-------------------------------------------  28
J  93.0% (40/43)    IGHJ5*02     9    -----------...G...C...............C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_101521

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     2e-90
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCTCAG	AGTAGTACCAACTGTTATG	GGCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCAGAGTAGTACCAACTGTTATGGGCTTCTACTACTACGGTATGGACGTC	ARGLRVVPTVMGFYYYGMDV	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	240	117	109	5	3	93.2
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	229	16	3	92.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  G  G  S  F  S  T  Y  Y  W  T  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_1973   1    ACCCTGTCCCTCACCTGCACTGTCTATGGTGGGTCCTTCAGCACTTACTACTGGACCTGGATCCGCCAGACCCCAGGGAAGGGGCTGGAG  90
V  92.3% (229/248)  IGHV4-34*01  49   ..................G......................TGG...........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><-----------------------------------------------------FR3
                                       W  I  G  E  I  Y  V  G  G  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_1973   91   TGGATTGGGGAAATCTATGTTGGTGGAGGCACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAG  180
V  92.3% (229/248)  IGHV4-34*01  139  ...............A..CA.A.....A.....---...................................A..................  225
                                       W  I  G  E  I  N  H  S  G  S  T     N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                      -IMGT------------------------------------------------------><-------------------------CDR3
                                       N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  G  L  R  V  V  P  T  V 
                    Query_1973   181  AACCAGTTCTCCCTGAACCTGAGCTCTGTGACCGCCGCGGACACGGCTATGTACTACTGCGCGAGAGGCCTCAGAGTAGTACCAACTGTT  270
V  92.3% (229/248)  IGHV4-34*01  226  .................G..............................G....T.....T........----------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                      
D  89.5% (17/19)    IGHD2-2*01   11   --------------------------------------------------------------------------..........G...C.  26

                                      -IMGT------------------------>                                 
                                       M  G  F  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1973   271  ATGGGCTTCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
D  89.5% (17/19)    IGHD2-2*01   27   ...------------------------------------------------------------  29
J  100.0% (55/55)   IGHJ6*02     8    --------.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_193068

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           332     3e-93
IGHD3-16*01                                                                                           10.3    114  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	A	TTGGG	TCTGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGGGTCTGCGTTTGACCAC	RELGLRLTT	242	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	29	27	1	1	93.1
CDR1-IMGT	29	52	24	21	3	0	87.5
FR2-IMGT	53	103	51	49	2	0	96.1
CDR2-IMGT	104	127	24	19	5	0	79.2
FR3-IMGT	128	241	114	110	4	0	96.5
CDR3-IMGT (germline)	242	247	6	6	0	0	100
Total	N/A	N/A	248	232	15	1	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L   P  V  Q  P  M  D  S  T  L  V  G  M  K  *  T  G  S  A  R  L  Q  G  R  G  * 
                    Query_1974   1    GGTCCCTGAGACT-TCCTGTGCAGCCTATGGATTCAACTTTAGTAGGTATGAAATGAACTGGGTCTGCCAGGCTCCAGGGAAGGGGCTAG  89
V  93.5% (232/248)  IGHV3-48*03  47   .............C.............C........C...C.....T..................C......................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       S  G  F  H  T  L  V  P  V  V  L  P  D  T  P  Q  T  L  *  R  A  D  S  P  S  P  E  T  T  P 
                    Query_1974   90   AGTGGGTTTCATACATTAGTACCAGTGGTTCTACCAGATACACCGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  179
V  93.5% (232/248)  IGHV3-48*03  137  .....................GT......AG.....T....TA...............................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                       R  P  H  C  I  C  R  *  T  A  *  E  P  R  T  R  L  F  I  T  V  R  E  L  G  L  R  L  T  T 
                    Query_1974   180  AGACCTCACTGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAATTGGGTCTGCGTTTGACCACT  269
V  93.5% (232/248)  IGHV3-48*03  227  ...A...............A................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-16*01  16   ---------------------------------------------------------------------.....----------------  20
J  95.3% (41/43)    IGHJ4*02     6    --------------------------------------------------------------------------------......T...  15

                                                                       
                                       G  A  R  E  P  W  S  P  S  P  Q 
                    Query_1974   270  GGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  302
J  95.3% (41/43)    IGHJ4*02     16   ....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_326543

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           411     5e-117
IGHD7-27*01                                                                                           18.0    0.66  
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGGA	CCCCGCCGCGGCA	AACTGGGGA	T	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGACCCCGCCGCGGCAAACTGGGGATTGATGCTTTTCATATC	GGPRRGKLGIDAFHI	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	4	2	0	66.7
Total	N/A	N/A	289	276	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_1975   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTCAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGTTA  90
V  95.5% (276/289)  IGHV5-51*03  6    ...........................G...........................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  G  W  V  R  Q  T  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_1975   91   CTTCATCGGCTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  95.5% (276/289)  IGHV5-51*03  96   ..GG...................T.........................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  S  V
                    Query_1975   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACAGCGT  270
V  95.5% (276/289)  IGHV5-51*03  186  ............................................G.........................................C..C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  G  G  P  R  R  G  K  L  G  I  D  A  F  H  I  W  G  Q  G  T  M  V  T  V  S  P
                    Query_1975   271  CATATATTATTGTGGGGGACCCCGCCGCGGCAAACTGGGGATTGATGCTTTTCATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTCC  360
V  95.5% (276/289)  IGHV5-51*03  276  ...G.....C....C.A..-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (9/9)     IGHD7-27*01  3    --------------------------------.........-------------------------------------------------  11
J  96.0% (48/50)    IGHJ3*02     1    ------------------------------------------..........G...................................T.  48

                                        
                                        
                    Query_1975   361  AG  362
J  96.0% (48/50)    IGHJ3*02     49   ..  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_349149

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           341     5e-96
IGHD2-8*01                                                                                            14.1    8.5  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD2-8*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GACTCGGTAAAGTTTCAA	GTATGCT	TTC	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAACAGAGACTCGGTAAAGTTTCAAGTATGCTTTCGACGTC	TTETR*SFKYAFDV	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	105	9	0	92.1
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	237	19	0	92.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  F  S  S  T  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1976   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCTTCAGTAGCACCTGGATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  92.6% (237/256)  IGHV3-15*01  47   .......T...........................A.T.......A.G.........G.....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  R  T  D  G  G  T  T  D  H  A  T  P  V  K  G  R  F  S  I  S  R  D  
                    Query_1976   91   AGTGGGTTGGCCGCATTAAAAGCAGAACTGATGGTGGGACAACAGACCACGCTACACCCGTGAAAGGCAGATTCTCCATCTCAAGAGATG  180
V  92.6% (237/256)  IGHV3-15*01  137  .............T..........A......................T.....G....................A...............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  S  T  L  F  L  Q  M  S  S  L  K  T  E  D  T  G  V  Y  Y  C  T  T  E  T  R  *  S  
                    Query_1976   181  ATTCAAAAAGTACGCTGTTTCTGCAAATGAGCAGCCTGAAAACCGAGGACACAGGCGTTTATTACTGTACAACAGAGACTCGGTAAAGTT  270
V  92.6% (237/256)  IGHV3-15*01  227  .........AC.......A...........A.......................C...G...........C.....--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 

                                      IMGT--------------->                                 
                                      F  K  Y  A  F  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1976   271  TCAAGTATGCTTTCGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
D  100.0% (7/7)     IGHD2-8*01   20   ----.......------------------------------------------  26
J  100.0% (39/39)   IGHJ6*02     24   --------------.......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_92215

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           413     2e-117
IGHD6-19*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATCGG	AGTGGCTG	CGTGGGGATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATCGGAGTGGCTGCGTGGGGATCTTGACTAC	ARGSEWLRGDLDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_1977   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  95.5% (277/290)  IGHV1-69*01  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  K  S  A  Q
                    Query_1977   91   TGGTATCAACTGGGTGCGACAGGCCCCTGGACAAGGTCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAACAAAAAGCGCACA  180
V  95.5% (277/290)  IGHV1-69*01  96   ..C.....G...........................G.......................................G....CTA......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  S  A  D  A  S  T  S  T  A  Y  L  E  L  S  S  L  T  S  E  D  T  A
                    Query_1977   181  GAAGTTCCAGGGCAGAGTCACGATTAGCGCGGACGCATCCACGAGCACAGCCTACTTGGAGCTGAGCAGCCTGACATCTGAGGACACGGC  270
V  95.5% (277/290)  IGHV1-69*01  186  ..........................C........A...................A..................G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        I  Y  Y  C  A  R  G  S  E  W  L  R  G  D  L  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_1977   271  CATATATTACTGTGCGAGAGGATCGGAGTGGCTGCGTGGGGATCTTGACTACTGGGGCCAGGGATCTCTGGTCACCGTCTCCTCAG  356
V  95.5% (277/290)  IGHV1-69*01  276  .G.G................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD6-19*01  10   --------------------------........----------------------------------------------------  17
J  95.2% (40/42)    IGHJ4*02     7    --------------------------------------------....................A.C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_349144

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           277     9e-77
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTTGT	ACCTACCA	TGACTACGGT	CTCCAGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCTACCATGACTACGGTCTCCAGTTCTACTTTCGCCAT	TYHDYGLQFYFRH	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	20	4	0	83.3
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	125	24	19	5	0	79.2
FR3-IMGT	126	239	114	102	12	0	89.5
Total	N/A	N/A	225	201	24	0	89.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  L  P  F  S  D  Y  G  F  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  V 
                    Query_1978   15   TGTGCAGCCTCTGGACTCCCCTTCAGTGACTATGGCTTTCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGGAGTGGGTGGCAGTTGTC  104
V  89.3% (201/225)  IGHV3-30*03  64   ...............T..A........AG.......A.G.............................G..................A.A  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  Y  D  G  S  E  K  F  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  S  K  N  T  V  Y  L 
                    Query_1978   105  TCATATGATGGAAGTGAAAAGTTCTATGCAGACTCCGTGAAGGGCCGACTCACCATCTCCAGAGACAATTCCAAGAACACTGTCTATCTG  194
V  89.3% (201/225)  IGHV3-30*03  154  ...............A.T..A.A.........................T...............................GC.G......  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------CDR3-IMGT-------------->      
                                       Q  M  S  R  L  R  A  E  D  S  A  V  Y  F  C  T  Y  H  D  Y  G  L  Q  F  Y  F  R  H  W  G 
                    Query_1978   195  CAGATGAGCAGGCTGAGAGCTGAGGACTCGGCTGTCTATTTTTGTACCTACCATGACTACGGTCTCCAGTTCTACTTTCGCCATTGGGGC  284
V  89.3% (201/225)  IGHV3-30*03  244  ..A....A...C...............A.......G....AC...---------------------------------------------  288
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                                              
D  100.0% (10/10)   IGHD4-17*01  1    -----------------------------------------------------..........---------------------------  10
J  89.4% (42/47)    IGHJ4*02     2    -----------------------------------------------------------------------.......GA.T.C......  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_1978   285  CAGGGGACCCTGGTCACCGTCTCCTCAG  312
J  89.4% (42/47)    IGHJ4*02     21   .....A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_349145

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           377     9e-107
IGHD5-18*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	GGATACACCTATGGT	CA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGATACACCTATGGTCATGACTAC	AREGYTYGHDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	266	25	0	91.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  F  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  G  P  F  S  S  Y
                    Query_1979   1    GCAGCTGGTGCAGTCTGGAGCCGAGTTTAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGCAAGGCCTCTGGCGGCCCCTTCAGCAGTTA  90
V  91.4% (266/291)  IGHV1-69*01  6    ..................G..T...G.G......................A...............T.....A...A..........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  I  R  Q  A  P  G  L  G  L  E  W  M  G  G  I  I  P  I  L  G  P  A  N  Y  A  V
                    Query_1979   91   CGCTATTAGCTGGATTCGACAGGCCCCTGGACTAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCCTTGGTCCAGCAAACTACGCAGT  180
V  91.4% (266/291)  IGHV1-69*01  96   T.....C......G.G................A..................................T.....A..............CA  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  L  E  V  K  S  L  R  S  E  D  T  A
                    Query_1979   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACTTGGAGGTGAAAAGCCTTCGATCTGAGGACACGGC  270
V  91.4% (266/291)  IGHV1-69*01  186  .......................................................A.....C...GC.....GA................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                
                                        V  Y  Y  C  A  R  E  G  Y  T  Y  G  H  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1979   271  CGTGTATTATTGTGCGAGAGAAGGATACACCTATGGTCATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  348
V  91.4% (266/291)  IGHV1-69*01  276  .........C...........---------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                            
D  93.3% (14/15)    IGHD5-18*01  3    ----------------------.......G.......-----------------------------------------  17
J  100.0% (39/39)   IGHJ4*02     8    ---------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_349146

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHD2-2*01                                                                                            23.8    0.011
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	TACGGTGGAG	TTGTAGTAGGAACAGCTG	ACCGAAACGAAG	TGGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGATACGGTGGAGTTGTAGTAGGAACAGCTGACCGAAACGAAGTGGGCGTC	GRYGGVVVGTADRNEVGV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  N  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_1980   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACTTTCAGTAATTATAGTATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  92.3% (229/248)  IGHV3-21*01  47   .....................C...............C.......GC.....C..........................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  S  K  K  Y  Y  A  G  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_1980   91   AGTGGGTCTCATCCATTAGTAGTCGTAGTAGTAAGAAATACTATGCAGGCTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  92.3% (229/248)  IGHV3-21*01  137  .......................A........T.C.T......C....A......................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  F  L  H  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  G  R  Y  G  G  V  V  V  G  
                    Query_1980   181  AGAATTCGCTGTTTCTGCACATGAACAGCCTGCGAGCCGAGGACACGGCTGTGTATTACTGTGGGAGATACGGTGGAGTTGTAGTAGGAA  270
V  92.3% (229/248)  IGHV3-21*01  227  ....C..A....A......A............A..............................C....----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD2-2*01   7    ------------------------------------------------------------------------------.........T.C  18

                                      IMGT--------------------->                                 
                                      T  A  D  R  N  E  V  G  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1980   271  CAGCTGACCGAAACGAAGTGGGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  88.9% (16/18)    IGHD2-2*01   19   ......-----------------------------------------------------  24
J  97.6% (40/41)    IGHJ6*02     22   ------------------...A.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_349147

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            341     5e-96
IGHD3-3*01                                                                                            12.2    32   
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ACCCGTGTGATGCC	TACCATCTTTGG	TG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACCCGTGTGATGCCTACCATCTTTGGTGACTACGGTATGGACGTC	ARTRVMPTIFGDYGMDV	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  D  S  I  T  S  S  H  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_1981  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCATCACCAGTAGTCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  94.3% (232/246)  IGHV4-4*01  49   ...............................G........G.......A.........................................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  R  T  R  V  T  I  S  I  D  K  S  K 
                    Query_1981  91   GAGTGGATTGGGGAAATCTATTATAGTGGGACCACGAACTACAATCCGTCCCTCAGGACTCGAGTCACCATATCAATAGACAAGTCCAAG  180
V  94.3% (232/246)  IGHV4-4*01  139  .....................C.........G...C........C..........A..G................G..............  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  T  R  V  M  P  T  I  F 
                    Query_1981  181  AATCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTTCTGTGCCAGAACCCGTGTGATGCCTACCATCTTT  270
V  94.3% (232/246)  IGHV4-4*01  229  ..C...............................................G....G......G...------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD3-3*01  5    --------------------------------------------------------------------------------...G..T...  14

                                     -------------------->                                 
                                      G  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_1981  271  GGTGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
D  83.3% (10/12)    IGHD3-3*01  15   ..----------------------------------------------------  16
J  100.0% (50/50)   IGHJ6*02    13   ----..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_349140

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_1982   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  92.2% (225/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  N  Y  T  P  S  L  K  P  R  V  T  F  S  L  D  T  S  K  N 
                    Query_1982   91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACACCCCCTCCCTCAAGCCTCGAGTCACCTTTTCATTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  ...A....G......T.......T................A.............AG..........A.A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  F  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G 
                    Query_1982   181  CAGTTCTCCCTGAGGCTGAGTTTTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGT  270
V  92.2% (225/244)  IGHV4-59*08  229  .............A......C.C........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_1982   271  TATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  334
J  94.2% (49/52)    IGHJ1*01     1    ------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_349141

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         297     7e-83
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	GGAGTCGTAATTAT	CATGGGAATTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGAGTCGTAATTATCATGGGAATTTCTACTTCGACCAC	ARGSRNYHGNFYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	220	30	0	88


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  D  S  V  Y  Y  S  L  N  W  I  R  Q  T  P  L  K  G 
                    Query_1983     1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCATCGACAGTGTTTACTACTCCTTAAACTGGATCCGGCAGACACCACTGAAGGGC  90
V  88.0% (220/250)  IGHV4-30-2*01  49   .......................C...............AG.....G.GGT.......GG.G.............C.....GG.......  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Q  H  S  G  A  T  Y  Y  N  P  S  L  E  S  R  V  S  L  S  V  D  R  S 
                    Query_1983     91   CTGGAGTGGATTGGCTACATCCAGCATTCTGGGGCCACCTACTACAACCCGTCCCTCGAGAGTCGGGTCTCCCTTTCAGTAGACCGGTCC  180
V  88.0% (220/250)  IGHV4-30-2*01  139  ..............G......T.T...AG....AG......................A.......A...A..A.A.........A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  S  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  R  N  Y  H  G 
                    Query_1983     181  AAGAGCCAGTTCTCCCTGAGGCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGAGGGAGTCGTAATTATCATGGG  270
V  88.0% (220/250)  IGHV4-30-2*01  229  ....A..............A.....G...........................G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  85.7% (12/14)    IGHD3-3*01     15   ----------------------------------------------------------------------.....G..T.....------  28

                                        ----------------->                                  
                                         N  F  Y  F  D  H  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_1983     271  AATTTCTACTTCGACCACTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTCAG  322
J  91.5% (43/47)    IGHJ4*02       2    -----......T...T...............C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_349142

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD2-21*01                                                                                           18.0    0.60 
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CAGTTTCTGTCTTAGTTTGGACCGGGGAGT	TTGTGGTGG	N/A	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGGGGAGTTTGTGGTGGTTTTGAAATG	ARGSFCLSLDRGVCGGFEM	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  N  G  G  S  L  N  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1984   1    ACCCTGTCCCTCACCTGCGCCGTCAATGGTGGGTCCCTCAATGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAG  90
V  92.2% (226/245)  IGHV4-34*01  49   ....................T...T...........T...G..G.......................................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  Q  S  G  T  T  N  Y  K  P  S  L  K  S  R  V  I  T  S  V  D  T  S  K  N 
                    Query_1984   91   TGGATTGGGGAAATCAATCAAAGTGGCACCACCAACTACAAGCCGTCCCTCAAGAGTCGAGTAATCACATCGGTGGACACGTCCAAGAAT  180
V  92.2% (226/245)  IGHV4-34*01  139  ....................T.....A.G............C....................C.C..T...A..A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  F  C  L  S  L  D  R 
                    Query_1984   181  CAGTTCTCCTTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGG  270
V  92.2% (226/245)  IGHV4-34*01  229  .........C.....C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      ----------------------->                               
                                       G  V  C  G  G  F  E  M  W  G  Q  G  T  M  V  T  V  S  
                    Query_1984   271  GGAGTTTGTGGTGGTTTTGAAATGTGGGGCCAAGGGACAATGGTCACCGTCTCTT  325
D  100.0% (9/9)     IGHD2-21*01  7    -----.........-----------------------------------------  15
J  95.1% (39/41)    IGHJ3*02     7    --------------......T..C...............................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_315358

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           380     1e-107
IGHD3-3*01                                                                                            35.3    4e-06 
IGHJ6*04                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ6*04	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGCGA	TAAGGAA	TACGATTTTTGGAGTGGT	CCTAATTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGATAAGGAATACGATTTTTGGAGTGGTCCTAATTTCTACTTCTACGGCATGGACGTC	ASDKEYDFWSGPNFYFYGMDV	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  T  N  Y
                    Query_1985   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCCGGAGGCACCTTCACCAACTA  90
V  91.8% (267/291)  IGHV1-69*01  6    ..................G..................................................T.............G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  M  P  L  L  G  T  P  H  Y  V  Q
                    Query_1985   91   CGTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAATGGATGGGAGGGATCATGCCTCTCCTTGGAACGCCACACTATGTTCA  180
V  91.8% (267/291)  IGHV1-69*01  96   T.C.......................................G.................C...A..T....T..AG..A....C.CA..  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  I  Y  M  E  V  S  R  L  R  S  E  D  T  A
                    Query_1985   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCAACGAGCACAATATACATGGAGGTGAGCAGGCTGAGATCTGAGGACACGGC  270
V  91.8% (267/291)  IGHV1-69*01  186  .......................................C.........GCC.........C.......C....................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        V  Y  Y  C  A  S  D  K  E  Y  D  F  W  S  G  P  N  F  Y  F  Y  G  M  D  V  W  G  K  G  T
                    Query_1985   271  CGTGTATTACTGTGCGAGCGATAAGGAATACGATTTTTGGAGTGGTCCTAATTTCTACTTCTACGGCATGGACGTCTGGGGCAAAGGGAC  360
V  91.8% (267/291)  IGHV1-69*01  276  ..................A..---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (18/18)   IGHD3-3*01   5    ----------------------------..................--------------------------------------------  22
J  96.4% (54/56)    IGHJ6*04     8    ------------------------------------------------------.....A......T.......................  43

                                                          
                                        T  V  T  V  S  S  
                    Query_1985   361  CACGGTCACCGTCTCCTCAG  380
J  96.4% (54/56)    IGHJ6*04     44   ....................  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_315359

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD6-6*01                                                                                            19.9    0.18  
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CGGA	AGTATAGGTGCTCGTC	T	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACGGAAGTATAGGTGCTCGTCTCAACTGGTTCGACCCC	ARHGSIGARLNWFDP	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	68	6	0	91.9
CDR1-IMGT	77	100	24	17	7	0	70.8
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	112	2	0	98.2
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	275	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  G  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P  
                    Query_1986   3    AGATGCAGCTGGTGCAGTCTGGAGCAGGGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCC  92
V  93.2% (275/295)  IGHV5-51*01  2    ..G........................A............C..................T.....A....T..........GC..TA..A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      R  Y  W  I  G  W  V  R  Q  M  L  G  K  G  L  E  W  M  G  I  I  F  P  A  D  S  D  T  R  Y  
                    Query_1986   93   GTTATTGGATCGGTTGGGTGCGCCAGATGCTCGGGAAGGGCCTGGAGTGGATGGGGATCATCTTTCCTGCTGACTCTGATACCAGATACA  182
V  93.2% (275/295)  IGHV5-51*01  92   .C..C........C................C......A.........................A.....G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_1986   183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  93.2% (275/295)  IGHV5-51*01  182  ................................................G.........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      S  A  M  Y  Y  C  A  R  H  G  S  I  G  A  R  L  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  
                    Query_1986   273  GCGCCATGTATTACTGTGCGAGACACGGAAGTATAGGTGCTCGTCTCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCT  362
V  93.2% (275/295)  IGHV5-51*01  272  C........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  87.5% (14/16)    IGHD6-6*01   2    -----------------------------.......CA.......---------------------------------------------  17
J  100.0% (50/50)   IGHJ5*02     2    ----------------------------------------------............................................  45

                                            
                                      S  S  
                    Query_1986   363  CCTCAG  368
J  100.0% (50/50)   IGHJ5*02     46   ......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_326540

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           341     5e-96
IGHD2-15*01                                                                                           10.3    121  
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	T	GCTGC	GCTGTACGAAGAGG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGCTGCGCTGTACGAAGAGGACAACTGGTTCGACCCC	AKDAALYEEDNWFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  N  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1987   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAATAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-30*18  47   ....................................C.....G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  R  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_1987   91   AGTGGGTGGCAGTTATCTCATATGATGGAAGGAAGAAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCG  180
V  93.6% (234/250)  IGHV3-30*18  137  ................A..............T..T.....C...........................................A....A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  T  V  N  L  E  M  N  S  L  R  I  E  D  T  A  V  Y  Y  C  A  K  D  A  A  L  Y  E  E  
                    Query_1987   181  AGAACACGGTGAATCTGGAAATGAATAGCCTGAGAATTGAGGACACGGCTGTTTATTACTGTGCGAAAGATGCTGCGCTGTACGAAGAGG  270
V  93.6% (234/250)  IGHV3-30*18  227  ........C..T.....C.......C.........GC...............G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD2-15*01  21   -----------------------------------------------------------------------.....--------------  25

                                      ---------------->                                
                                      D  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1987   271  ACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
J  100.0% (49/49)   IGHJ5*02     1    .................................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_21504

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     7e-91
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TCTAGATGGCCCCAAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTAGATGGCCCCAATTACTTCTACGGGATGCACGTC	ARDLDGPNYFYGMHV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  S  L  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_1988   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCTCCCTCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTGGAA  90
V  92.2% (226/245)  IGHV4-59*01  49   ...................C................A..............................................A.....G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  F  S  G  N  T  N  Y  N  P  S  L  K  G  R  V  N  I  S  G  D  T  S  Q  N 
                    Query_1988   91   TGGATTGGCTATATTCATTTCAGTGGAAACACCAACTACAACCCCTCCCTCAAGGGTCGGGTCAACATATCAGGAGACACGTCCCAGAAC  180
V  92.2% (226/245)  IGHV4-59*01  139  ........G.....CT...A......G.G.........................A....A....C........T..........A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  D  G  P  N  Y  F  Y 
                    Query_1988   181  CAGTTCTCCCTGAAGGTGAACTCTGTTACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGATCTAGATGGCCCCAATTACTTCTAC  270
V  92.2% (226/245)  IGHV4-59*01  229  ...............C...G......G..........................C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  88.7% (47/53)    IGHJ6*02     9    ---------------------------------------------------------------------------------....A....  17

                                      ----------->                                
                                       G  M  H  V  W  G  P  G  T  A  V  I  V  S  S
                    Query_1988   271  GGGATGCACGTCTGGGGCCCAGGGACCGCGGTCATCGTCTCCTC  314
J  88.7% (47/53)    IGHJ6*02     18   ..T...G............A.......A......C.........  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_315350

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            252     3e-69
IGHD2-15*01                                                                                           23.8    0.012
IGHJ4*02                                                                                              46.8    3e-09


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GAGTCTCTG	GGATATTGTAGT	CGAGGCAACCGCGAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAGTCTCTGGGATATTGTAGTCGAGGCAACCGCGAG	AESLGYCSRGNRE	281	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	61	8	0	88.4
CDR1-IMGT	71	94	24	15	9	0	62.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	166	24	14	7	3	58.3
FR3-IMGT	167	280	114	86	28	0	75.4
CDR3-IMGT (germline)	281	283	3	3	0	0	100
Total	N/A	N/A	285	225	57	3	78.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  P  E  V  K  R  P  G  A  S  V  K  I  S  C  T  A  S  G  R  T  F  G  D  N 
                    Query_1989   2    CAGCTGGTGCAGTCTGGGCCTGAGGTGAAGAGGCCTGGGGCCTCCGTAAAAATTTCCTGCACGGCTTCTGGACGCACATTCGGCGACAAT  91
V  78.9% (225/285)  IGHV1-3*01   7    .....T............G............A............A..G..GG.........A..........TA...C...ACTAG.T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  H  W  V  R  Q  A  P  G  Q  R  P  E  W  M  G  W  I  N  A     R  L  E  T  R  Y  S  P 
                    Query_1989   92   GCTATACATTGGGTGCGCCAGGCCCCCGGACAACGCCCTGAGTGGATGGGCTGGATCAACGC---CAGATTAGAGACAAGATATTCTCCG  178
V  78.9% (225/285)  IGHV1-3*01   97   .....G...........................A.G.T............A...........TGG..ATGGTA.C....A......A.A.  186
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  G  G  R  L  L  L  S  R  D  T  P  A  N  T  G  H  F  E  L  T  G  L  T  S  E  D  T  A 
                    Query_1989   179  AAATTTGGGGGCAGACTTCTCCTCTCCAGGGACACGCCCGCGAACACAGGCCACTTCGAGTTGACTGGCCTGACGTCTGAAGACACTGCT  268
V  78.9% (225/285)  IGHV1-3*01   187  ..G..CCA.......G.CAC.A.TA..........AT......G.....C.T..A.G...C...GCA......GA...........G...  276
                                       K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><--------------CDR3-IMGT-------------->                              
                                       V  Y  Y  C  A  E  S  L  G  Y  C  S  R  G  N  R  E  W  G  P  G  T  L  V  T  V  S 
                    Query_1989   269  GTGTATTACTGTGCGGAGTCTCTGGGATATTGTAGTCGAGGCAACCGCGAGTGGGGCCCGGGAACTCTGGTCACCGTCTCC  349
V  78.9% (225/285)  IGHV1-3*01   277  ...............------------------------------------------------------------------  291
                                       V  Y  Y  C  A                                                                   
D  100.0% (12/12)   IGHD2-15*01  2    ------------------------............---------------------------------------------  13
J  93.3% (28/30)    IGHJ4*02     15   ---------------------------------------------------.......A......C...............  44


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_92210

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           318     6e-89
IGHD3-10*01                                                                                           18.0    0.62 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_1990   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  90.8% (226/249)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_1990   91   CTAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCC  180
V  90.8% (226/249)  IGHV4-61*08  139  ..G..................T..T................C.................G.......TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       R  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S 
                    Query_1990   181  AGGAACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCC  270
V  90.8% (226/249)  IGHV4-61*08  229  .A.................A......C...........T..G...........G.....C.........---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------------........G...-  15

                                      CDR3-IMGT-------------------------->                                  
                                       T  G  Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_1990   271  ACTGGTTATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  340
J  94.2% (49/52)    IGHJ1*01     1    ------------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_315352

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD3-10*01                                                                                           18.0    0.68  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GATTACGGTGGTGTAGTGATGGAACTTG	TTACTCTGGTTC	A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTACGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTAT	ARRLRWCSDGTCYSGSFEY	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  K  F  T  S  Y
                    Query_1991   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAAGTTTACCAGCTA  90
V  94.5% (274/290)  IGHV5-51*01  6    ..............................A........G.....................................GC...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  F  P  R  D  S  D  T  R  Y  N  P
                    Query_1991   91   TTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTCGTGACTCCGATACCAGATATAACCC  180
V  94.5% (274/290)  IGHV5-51*01  96   C......................T...........................G.......A....G.......T...........C.G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  D  Q  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  D  S  L  K  A  S  D  T  A
                    Query_1991   181  GTCCTTCCAAGACCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTACCTGCAGTGGGACAGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (274/290)  IGHV5-51*01  186  ...........G.......................A............................AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  R  L  R  W  C  S  D  G  T  C  Y  S  G  S  F  E  Y  W  G  Q  G  T  L  V
                    Query_1991   271  CATGTATTACTGTGCGAGACGATTACGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTATTGGGGCCAGGGAACCCTGGT  360
V  94.5% (274/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD3-10*01  4    ------------------------------------------------.....A......------------------------------  15
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------------------------.....C..C....................  34

                                                    
                                        T  V  S  S  
                    Query_1991   361  CACCGTCTCCTCAG  374
J  95.3% (41/43)    IGHJ4*02     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_315353

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            357     1e-100
IGHD5-12*01                                                                                           12.2    32    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	GTGGAT	GCATCACTCTGAGCGGACCCTATA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTGGATGCATCACTCTGAGCGGACCCTATATGACTGC	AREWMHHSERTLYDC	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_1992   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCGGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-7*01   47   ............................T.............................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  Q  V  E  N  E  R  N  Y  M  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_1992   91   AGTGGGTGGCCAACATAAACCAAGTTGAAAATGAAAGAAACTATATGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (239/250)  IGHV3-7*01   137  ...................G....A..G..G...G.A.T.....G.............................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  W  M  H  H  S  E  
                    Query_1992   181  AGAACTCACTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGAGTGGATGCATCACTCTGAGC  270
V  95.6% (239/250)  IGHV3-7*01   227  .................C..................................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD5-12*01  1    ----------------------------------------------------------------------......--------------  6

                                      ---------------->                                  
                                      R  T  L  Y  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1992   271  GGACCCTATATGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.6% (40/41)    IGHJ4*02     8    ----------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_315355

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           413     2e-117
IGHD1-26*01                                                                                           10.3    134   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	290	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	71	4	0	94.7
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	296	280	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_1993   2    CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  91
V  94.6% (280/296)  IGHV1-18*01  1    .....T.....G...........A...............................A..................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  F  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  Y 
                    Query_1993   92   ACCTTTGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTAT  181
V  94.6% (280/296)  IGHV1-18*01  91   .G..A..G.................................................T......G.G...........A.......C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_1993   182  GCACAGGGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  271
V  94.6% (280/296)  IGHV1-18*01  181  ......AA..................................................................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------CDR3-IMGT----------->                                  
                                       T  A  I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_1993   272  ACGGCCATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  356
V  94.6% (280/296)  IGHV1-18*01  271  ......G.G.................-----------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_315356

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD2-21*02                                                                                           50.7    1e-10 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTGG	GCATATTGTGGTGGTGACTGCTATTC	AC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTGGGCATATTGTGGTGGTGACTGCTATTCACTTGACTAC	ARWAYCGGDCYSLDY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	106	8	0	93
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	292	272	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  L  S  
                    Query_1994   2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATTTCCTGTAAGGGTTCTGGATACAGATTAAGCA  91
V  93.2% (272/292)  IGHV5-51*01  2    ....G.....G...............................................C.......................C..T.C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  E  T  K  Y  
                    Query_1994   92   GTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCGTCTATCCTGGTGACTCTGAGACCAAATACA  181
V  93.2% (272/292)  IGHV5-51*01  92   .C..C.......G..........................................G...A...................T....G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  A  S  G  T  A  F  L  Q  W  D  S  L  K  A  S  D  
                    Query_1994   182  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGGCCAGCGGCACCGCCTTCCTGCAGTGGGACAGCCTGAAGGCCTCGGACA  271
V  93.2% (272/292)  IGHV5-51*01  182  ...........C.............................T...T.A.........A..........AG....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  Y  C  A  R  W  A  Y  C  G  G  D  C  Y  S  L  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_1994   272  CCGCCATGTATTACTGTGCGAGGTGGGCATATTGTGGTGGTGACTGCTATTCACTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  361
V  93.2% (272/292)  IGHV5-51*01  272  ......................--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (26/26)   IGHD2-21*02  2    --------------------------..........................--------------------------------------  27
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------------....................................  42

                                            
                                      S  S  
                    Query_1994   362  CCTCAG  367
J  100.0% (42/42)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_342474

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           325     3e-91
IGHD2-8*01                                                                                            12.2    31   
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TAATGG	CCCGACTGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGGCCCGACTGAACTACGGCATGGGCGTC	ARLMARLNYGMGV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  L  T  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_1995   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCCTCACCAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCCGGGAAGGGACTGGAA  90
V  92.6% (226/244)  IGHV4-59*08  49   ..................A............G....A...GT..................A.............A..............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  E  Y  I  Y  Y  R  G  R  P  N  N  N  P  S  L  R  S  R  V  T  I  S  V  D  A  S  K  N 
                    Query_1995   91   TGGGTTGAGTATATCTATTACAGAGGGCGTCCCAACAACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACGCGTCCAAGAAC  180
V  92.6% (226/244)  IGHV4-59*08  139  ...A...G...............T...A.CA.....T...............A.........................A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  A  R  L  N  Y  G  M 
                    Query_1995   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACTAATGGCCCGACTGAACTACGGCATG  270
V  92.6% (226/244)  IGHV4-59*08  229  ...................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-8*01   13   ----------------------------------------------------------------......--------------------  18
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       G  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_1995   271  GGCGTCTGGGGCCGAGGGACCACGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...........A.....................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_76540

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-10*01                                                                                           10.3    115  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGCCGTCA	GGGGA	CC	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGCCGTCAGGGGACCGGTTCGACCCC	ARWPSGDRFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  P  Y  Y  W  G  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_1996   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGACCTTACTACTGGGGCTGGATCCGGCAGACCCCGGGGAAGGGACTGGAG  90
V  93.8% (228/243)  IGHV4-59*01  49   .........................................TAG..........A..............C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  P  K  N 
                    Query_1996   91   TGGATTGGGTATATCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGCCCAAGAAC  180
V  93.8% (228/243)  IGHV4-59*01  139  ...............T.................................................................T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  R  V  T  S  M  N  A  A  D  T  A  V  Y  Y  C  A  R  W  P  S  G  D  R  F  D  P 
                    Query_1996   181  CAGTTCTCCCTCAGGGTGACCTCTATGAACGCTGCGGACACGGCCGTTTATTACTGTGCGAGATGGCCGTCAGGGGACCGGTTCGACCCC  270
V  93.8% (228/243)  IGHV4-59*01  229  ...........G.A.C...G....G...C..................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-10*01  16   ------------------------------------------------------------------------.....-------------  20
J  100.0% (45/45)   IGHJ5*02     7    -------------------------------------------------------------------------------...........  17

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1996   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (45/45)   IGHJ5*02     18   ..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_342476

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     1e-124
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_1997   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  98.3% (284/289)  IGHV5-51*01  6    .............................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_1997   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_1997   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_1997   271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_1997   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_119118

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD3-16*02                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTATCG	ACATTGGTTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTATTTGACTAT	ARHYRHWLFDY	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	238	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  L  T  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_1998   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCCTCACCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (238/251)  IGHV4-39*01  49   ...............................G....A...G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_1998   91   CTGGAGTGGATTGGGAGTTTGTATTATAGTGGCAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  94.8% (238/251)  IGHV4-39*01  139  ..................A.C...........G...............................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  H  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  H  W  L  F 
                    Query_1998   181  AAGAACCACTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACATTATCGACATTGGTTATTT  270
V  94.8% (238/251)  IGHV4-39*01  229  ........G..C........G....G...T.......................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-16*02  25   -----------------------------------------------------------------------......-------------  30
J  97.7% (42/43)    IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1998   271  GACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  97.7% (42/43)    IGHJ4*02     9    .....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_119119

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         349     2e-98
IGHD3-10*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAAGCACCCCAAACTCC	GGGAGTT	GGGGTTATC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAAGCACCCCAAACTCCGGGAGTTGGGGTTATCTGACTAC	ARKHPKLRELGLSDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  E  A  S  G  F  T  F  S  R  N  T  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_1999     1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTCAGTAGAAATACTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.1% (235/247)  IGHV3-30-3*01  47   .....................C........................CT..G.......................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  L  I  S  H  D  G  T  N  K  Y  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_1999     91   AGTGGGTGGCACTTATATCACATGATGGAACCAATAAATACTATGCAGACTCCGTGAAGGGCCGACTCACCATCTCCAGAGACAATTCCA  180
V  95.1% (235/247)  IGHV3-30-3*01  137  ...........G........T.........G............C.....................T........................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  F  C  A  R  K  H  P  K  L  R  E  
                    Query_1999     181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGAGCTGACGACACGGCTGTGTATTTCTGTGCGAGGAAGCACCCCAAACTCCGGGAGT  270
V  95.1% (235/247)  IGHV3-30-3*01  227  .......G................................G................A.........-----------------------  293
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-10*01    17   ------------------------------------------------------------------------------------......  22

                                        ---------------->                                  
                                        L  G  L  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_1999     271  TGGGGTTATCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (7/7)     IGHD3-10*01    23   .--------------------------------------------------  23
J  100.0% (41/41)   IGHJ4*02       8    ----------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_119110

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           419     2e-119
IGHD5-18*01                                                                                           14.1    9.7   
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGAG	TACATCTATG	CCTCGGGCGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGAGTACATCTATGCCTCGGGCGGACTGGGTCGACCAC	ARDRSTSMPRADWVDH	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	19	5	0	79.2
FR3-IMGT	177	290	114	110	4	0	96.5
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	282	14	0	95.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  I 
                    Query_2000   3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTTATC  92
V  95.3% (282/296)  IGHV1-18*01  1    .....T............................A....................................T................C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  T  Y  N  A  N  T  N  S 
                    Query_2000   93   AGTTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCTACAATGCCAACACAAACTCT  182
V  95.3% (282/296)  IGHV1-18*01  91   ..C.............................................................G.G.T.......GT..........A.  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  L  Q  G  R  I  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_2000   183  GCACAGAACCTCCAGGGCAGAATCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAACTGAGGAGCCTGAGATCTGACGAC  272
V  95.3% (282/296)  IGHV1-18*01  181  ........G............G...........................................G........................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  D  R  S  T  S  M  P  R  A  D  W  V  D  H  W  G  Q  G  T  L  V  T 
                    Query_2000   273  ACGGCCGTGTATTACTGTGCGAGAGATCGGAGTACATCTATGCCTCGGGCGGACTGGGTCGACCACTGGGGCCAGGGAACCCTGGTCACC  362
V  95.3% (282/296)  IGHV1-18*01  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  90.0% (9/10)     IGHD5-18*01  6    --------------------------------....G.....------------------------------------------------  15
J  95.8% (46/48)    IGHJ5*02     4    ----------------------------------------------------.....T......C.........................  41

                                                
                                       V  S  S  
                    Query_2000   363  GTCTCCTCAG  372
J  95.8% (46/48)    IGHJ5*02     42   ..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_119111

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           313     2e-87
IGHD4-17*01                                                                                           25.7    0.003
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGCGGCAC	TGACTACGTTGACTAC	GGGGAGGCCGCTCCACGGGAGGTG	GGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGACGGCGGCACTGACTACGTTGACTACGGGGAGGCCGCTCCACGGGAGGTGGGTCTGGACGTC	VRDGGTDYVDYGEAAPREVGLDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  G  Y  A  I  H  W  V  R  R  A  P  G  K  G  L  
                    Query_2001   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAATGGCTATGCCATACACTGGGTCCGCCGGGCTCCAGGCAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-33*01  47   ..........................................G.A......G...G.............A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  V  D  G  N  T  Q  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_2001   91   AGTGGGTGGCCATTATTTGGGTTGATGGAAATACTCAAAACTATGCTGACTCCGTGAAGGGCCGATTCACCGTTTCCAGAGACAATTCCA  180
V  90.0% (225/250)  IGHV3-33*01  137  ..........AG....A...TA........G..A.A..T.......A........................A.C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  V  Y  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  V  R  D  G  G  T  D  Y  V  
                    Query_2001   181  AGAACACAGTGTATTTGCAAATGAACAGCCTGACGGCCGAAGACACGGCTGTCTATTACTGTGTGAGAGACGGCGGCACTGACTACGTTG  270
V  90.0% (225/250)  IGHV3-33*01  227  .......GC.....C..................GA.....G...........G..........C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.8% (15/16)    IGHD4-17*01  1    -------------------------------------------------------------------------------........G..  11

                                      --CDR3-IMGT----------------------------->                                 
                                      D  Y  G  E  A  A  P  R  E  V  G  L  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_2001   271  ACTACGGGGAGGCCGCTCCACGGGAGGTGGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  344
D  93.8% (15/16)    IGHD4-17*01  12   .....---------------------------------------------------------------------  16
J  95.6% (43/45)    IGHJ6*02     18   -----------------------------...A..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_119113

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	292	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	65	6	0	91.5
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	298	7	6	1	0	85.7
Total	N/A	N/A	291	268	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  V  E  V  R  K  S  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  
                    Query_2002   8    TGCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGTCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATC  97
V  92.1% (268/291)  IGHV5-51*01  5    .....................C........A....C................G.........A......C.........C.......GCT  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      H  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  
                    Query_2002   98   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCC  187
V  92.1% (268/291)  IGHV5-51*01  95   ....................................................G.......A.....G.......G....C.....C....  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  
                    Query_2002   188  CGTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCG  277
V  92.1% (268/291)  IGHV5-51*01  185  ................G........C...................................G.......G....................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------CDR3-IMGT----------->                                  
                                      A  L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_2002   278  CCTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  358
V  92.1% (268/291)  IGHV5-51*01  275  ..A.......C.....G....------------------------------------------------------------  295
                                      A  M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   -----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    ------------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_119114

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           371     7e-105
IGHD3-10*01                                                                                           14.1    9.5   
IGHJ2*01                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGCC	ACTATGG	GGATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATC	ARSHYGDAYWYLDI	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	96	18	0	84.2
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	293	265	28	0	90.4


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T 
                    Query_2003   1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATCTTCACC  90
V  90.4% (265/293)  IGHV1-18*01  1    .....T.................................................................T..........C...T...  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  F  E  W  M  G  W  I  S  P  Y  N  G  N  T  A  Y 
                    Query_2003   91   AGTTATGGAATCACTTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAGCCTAC  180
V  90.4% (265/293)  IGHV1-18*01  91   ..C.....T....GC...........................C.......................G.................AA...T  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  E  K  F  Q  G  R  F  T  V  A  T  E  T  S  T  N  T  A  F  M  E  L  R  S  L  K  A  D  D 
                    Query_2003   181  GCAGAGAAGTTCCAGGGCAGATTCACCGTGGCCACAGAGACTTCCACGAACACAGCCTTCATGGAGCTGCGGAGTCTGAAAGCGGACGAC  270
V  90.4% (265/293)  IGHV1-18*01  181  ...C.....C...........G.....A..A.......C..A.......G........A..........A....C....G.T.T......  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  S  H  Y  G  D  A  Y  W  Y  L  D  I  W  G  R  G  T  L  V  T  V  S 
                    Query_2003   271  ACGGCCGTCTATTACTGTGCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATCTGGGGCCGTGGCACCCTGGTCACTGTCTCC  360
V  90.4% (265/293)  IGHV1-18*01  271  ........G..............-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (7/7)     IGHD3-10*01  6    ----------------------------.......-------------------------------------------------------  12
J  96.2% (51/53)    IGHJ2*01     1    -----------------------------------------..........T.....C................................  49

                                          
                                       S  
                    Query_2003   361  TCAG  364
J  96.2% (51/53)    IGHJ2*01     50   ....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_119115

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           357     1e-100
IGHD3-9*01                                                                                            12.2    31    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGA	ATATTT	CCCACGAGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGACGAATATTTCCCACGAGGCTTTCAGTAC	VRDEYFPRGFQY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2004   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGGCTACTGGATGCACTGGGTCCGCCAAGCACCAGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-74*01  47   ............................................A............................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  I  I  D  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2004   91   TGTGGGTCTCACGTATTAATAGTGATGGGAGTATCATAGACTCCGCGGATTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (239/250)  IGHV3-74*01  137  .................................G..C.AG..A......C........................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  E  Y  F  P  R  G  
                    Query_2004   181  AGAACACACTGTATCTGCAAATGAGCAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGTAAGAGACGAATATTTCCCACGAGGCT  270
V  95.6% (239/250)  IGHV3-74*01  227  .......G................A......................................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-9*01   9    -------------------------------------------------------------------------......-----------  14
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  Q  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2004   271  TTCAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  95.5% (42/44)    IGHJ4*02     7    ..G.C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_119116

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     6e-104
IGHD7-27*01                                                                                           14.1    8.3   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCA	AACTGGG	AACTCAATAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGACGTCAAACTGGGAACTCAATATACAACTGGTTCGACCCC	SRRQTGNSIYNWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2005   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (239/243)  IGHV4-59*01  49   .......................................................G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2005   91   TGGATTGGATATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  ........G.................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  R  R  Q  T  G  N  S  I  Y  N 
                    Query_2005   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTTCGAGACGTCAAACTGGGAACTCAATATACAAC  270
V  98.4% (239/243)  IGHV4-59*01  229  .............A...........................................G.....---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD7-27*01  3    --------------------------------------------------------------------.......---------------  9
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------------.....  5

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2005   271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (51/51)   IGHJ5*02     6    ..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_119117

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           360     1e-101
IGHD2-21*01                                                                                           12.2    31    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGAACCCCG	TATTCC	CGTCGCCA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGATGAACCCCGTATTCCCGTCGCCAAC	VRDEPRIPVAN	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  T  V  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2006   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCACTGTTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-48*03  47   ....................................C.....G.AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  G  G  S  T  I  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_2006   91   AGTGGGTTTCATACATTAGTAGTGGTGGTTCTACCATATACTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-48*03  137  .......................A.....AG..........................A................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  E  P  R  I  P  V  
                    Query_2006   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGTGCGAGATGAACCCCGTATTCCCGTCG  270
V  96.0% (240/250)  IGHV3-48*03  227  ...............................................................C.A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*01  23   -------------------------------------------------------------------------------......-----  28

                                      ---->                                  
                                      A  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2006   271  CCAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (36/36)   IGHJ4*02     13   ---....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_75477

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           308     4e-86
IGHD1-20*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              44.9    1e-08


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGGATACAA	GTATAAC	GGAATA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGGATACAAGTATAACGGAATAGGTATGGACGTC	TRSGYKYNGIGMDV	237	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	19	5	0	79.2
FR2-IMGT	51	101	51	50	1	0	98
CDR2-IMGT	102	122	21	19	2	0	90.5
FR3-IMGT	123	236	114	108	6	0	94.7
CDR3-IMGT (germline)	237	242	6	5	1	0	83.3
Total	N/A	N/A	227	212	15	0	93.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  V  S  N  N  C  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  
                    Query_2007   16   GTGCAGCCTCTGGGTTCACCGTAAGTAATAATTGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTT  105
V  93.4% (212/227)  IGHV3-53*01  65   ......................C....GC..C.A.....G..................................................  154
                                         A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  

                                      --CDR2-IMGT-----><----------------------------------------------------FR3-IMGT------------
                                      Y  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  T  T  L  Y  L  Q  
                    Query_2007   106  ATAGTGGTGGTACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGACCACACTGTATCTTCAAA  195
V  93.4% (212/227)  IGHV3-53*01  155  ....C.......G..............................A............................A...G.............  244
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  

                                      ----------------------------------------><----------------CDR3-IMGT--------------->       
                                      M  N  S  L  R  A  E  D  S  A  V  Y  Y  C  T  R  S  G  Y  K  Y  N  G  I  G  M  D  V  W  G  
                    Query_2007   196  TGAACAGTTTGAGAGCCGAGGACTCGGCCGTGTATTACTGTACGAGATCAGGATACAAGTATAACGGAATAGGTATGGACGTCTGGGGCC  285
V  93.4% (212/227)  IGHV3-53*01  245  .......CC..............A.................G.....-------------------------------------------  291
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                            
D  100.0% (7/7)     IGHD1-20*01  2    ----------------------------------------------------------.......-------------------------  8
J  96.2% (25/26)    IGHJ6*02     18   -----------------------------------------------------------------------...................  36

                                             
                                      Q  R  T
                    Query_2007   286  AAAGGAC  292
J  96.2% (25/26)    IGHJ6*02     37   ..G....  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_326548

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           375     3e-106
IGHD2-21*02                                                                                           23.8    0.011 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGGGCTGACTGC	AA	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGGGCTGACTGCAAACTCCTTTGACTAC	ARAIVGLTANSFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2008   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.0% (245/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  G  T  S 
                    Query_2008   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGGCACGTCT  180
V  98.0% (245/250)  IGHV4-31*03  139  ...............T......A...........................................G...............A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  G  L  T  A 
                    Query_2008   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGGGCTGACTGCA  270
V  98.0% (245/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (16/18)    IGHD2-21*02  5    -----------------------------------------------------------------------........T.G.......-  22

                                      -------------->                                  
                                       N  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2008   271  AACTCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  97.9% (47/48)    IGHJ4*02     1    -...A............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_75476

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           327     9e-92
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2009   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.0% (226/243)  IGHV4-34*01  49   ................................G...T..................G...........................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  I  S  L  D  M  S  K  N 
                    Query_2009   91   TGGATTGGGGAAATCAATCACAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGAGTCTCCATTTCATTAGACATGTCCAAGAAC  180
V  93.0% (226/243)  IGHV4-34*01  139  ....................T........C..................C..A...........A....A...G......C..........  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  V  K  M  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y 
                    Query_2009   181  CAGTTCTCCGTGAAGATGACGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAACCGTAAAGGGGGTTATTACTGTCTAC  270
V  93.0% (226/243)  IGHV4-34*01  229  .........C.....C...GC..........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  20   --------------------------------------------------------------------------..........------  29

                                      -------------------->                                 
                                       Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2009   271  CAGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  100.0% (40/40)   IGHJ6*02     23   --------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_74320

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           263     2e-72
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	CCTGTCCCGCGTTATGG	TTTTTGGAATGGTTATT	CCAAAATCTAACTCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCCTGTCCCGCGTTATGGTTTTTGGAATGGTTATTCCAAAATCTAACTCTTTCGACACC	ARGLSRVMVFGMVIPKSNSFDT	240	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	206	38	0	84.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  G  S  L  D  G  H  Y  W  T  W  I  R  Q  A  P  G  K  G  L  E  
                    Query_2010   4    CCCTGAGACTCTCCTGTTCTGTCTCTGGTGGGTCGCTCGATGGTCACTACTGGACCTGGATACGCCAGGCCCCAGGGAAGGGTCTGGAGT  93
V  84.4% (206/244)  IGHV4-34*01  50   .....TCC...A....CG......A.........CT..AG....T.........G......C......C.............G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  S  H  T  G  D  T  N  Y  N  S  S  L  K  S  R  V  G  L  S  V  D  T  S  R  N  
                    Query_2010   94   GGATTGGGGAGATTTCTCATACTGGAGACACCAACTACAACTCGTCCCTCAAGAGTCGAGTCGGCTTGTCAGTTGACACGTCCAGGAACC  183
V  84.4% (206/244)  IGHV4-34*01  140  ..........A..CAA.....G....AG.............C....................AC.A.A.....A..........A.....  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------------CDR3-
                                      Q  F  S  L  K  L  T  S  L  T  G  A  D  T  G  V  Y  Y  C  A  R  G  L  S  R  V  M  V  F  G  
                    Query_2010   184  AGTTCTCCCTGAAGTTGACCTCCCTGACCGGCGCGGACACGGGTGTCTATTACTGTGCGCGAGGCCTGTCCCGCGTTATGGTTTTTGGAA  273
V  84.4% (206/244)  IGHV4-34*01  230  ..............C...G...TG......C...........C...G............A....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  94.1% (16/17)    IGHD3-3*01   10   ---------------------------------------------------------------------------------........G  18

                                      IMGT--------------------------->                                  
                                      M  V  I  P  K  S  N  S  F  D  T  W  G  P  G  V  L  V  T  V  S  S  
                    Query_2010   274  TGGTTATTCCAAAATCTAACTCTTTCGACACCTGGGGCCCGGGAGTCCTGGTTACCGTCTCCTCAG  339
D  94.1% (16/17)    IGHD3-3*01   19   ........----------------------------------------------------------  26
J  88.4% (38/43)    IGHJ5*02     9    -----------------------......C.........A....AC......C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_165633

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD2-21*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGGGGG	ATTGTGATGGT	ATTAACTGCTTCCCCTGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGGATTGTGATGGTATTAACTGCTTCCCCTGGTACTACTATTATGGAATGCACGTC	AKGDCDGINCFPWYYYYGMHV	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	221	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  L  Y  G  G  S  F  S  G  H  Y  W  I  W  L  R  Q  S  P  G  K  G  L  E 
                    Query_2011   1    ACCCTGTCCCTCACCTGCGCTCTCTATGGTGGGTCCTTCAGTGGTCACTACTGGATTTGGCTCCGCCAGTCCCCCGGGAAGGGGCTGGAG  90
V  91.7% (221/241)  IGHV4-34*01  49   .....................G.......................T.........GC...A........C....A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  K  Y  N  S  S  L  K  S  R  V  A  M  S  I  D  A  S  K  S 
                    Query_2011   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACGAAGTACAACTCGTCCCTCAAGAGTCGAGTCGCCATGTCAATAGACGCGTCCAAGAGT  180
V  91.7% (221/241)  IGHV4-34*01  139  ................................C..C......C....................A....A...G.....A.........AC  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  Y  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  G  D  C  D  G  I  N  C  F 
                    Query_2011   181  CAATTCTACCTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAAGGGGGATTGTGATGGTATTAACTGCTTC  270
V  91.7% (221/241)  IGHV4-34*01  229  ..G....C...........G...........................G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (10/11)    IGHD2-21*01  6    -------------------------------------------------------------------......G....------------  16

                                      MGT-------------------------->                                 
                                       P  W  Y  Y  Y  Y  G  M  H  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_2011   271  CCCTGGTACTACTATTATGGAATGCACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  333
J  91.2% (52/57)    IGHJ6*02     6    ------........C..C..T...G...........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_75474

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            339     2e-95
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGATGAA	TCGGGGAG	GCCC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGATGAATCGGGGAGGCCCCTATTATTACTACGGCATGGACGTC	ARVMNRGGPYYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  L  S  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_2012   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCCTTAGTAGTTACTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-7*03   47   ...................................A..T.......C..T.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  K  H  Y  V  D  S  A  Q  G  R  F  T  V  S  R  D  N  A  
                    Query_2012   91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGAGAAACACTATGTGGACTCTGCGCAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  93.6% (233/249)  IGHV3-7*03   137  ....................C.................T...............T.A..............A..................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  I  L  Q  M  S  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  V  M  N  R  G  G  P  
                    Query_2012   181  AGAATTCACTGATTCTGCAAATGAGTAGCCTGAGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGTGATGAATCGGGGAGGCCCCT  270
V  93.6% (233/249)  IGHV3-7*03   227  ....C......TA...........AC..........C................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-10*01  14   ----------------------------------------------------------------------------........------  21
J  94.8% (55/58)    IGHJ6*02     5    ----------------------------------------------------------------------------------------..  6

                                      GT-------------------->                                 
                                      Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2012   271  ATTATTACTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  94.8% (55/58)    IGHJ6*02     7    .C..C........T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_46278

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_2013   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AGT.A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S 
                    Query_2013   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T.A....A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_2013   181  CAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ..............G.....C..................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2013   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_46277

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           300     8e-84
IGHD1-26*01                                                                                           10.3    123  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTCCC	GGAGC	GGGCGGACGGACG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTCCCGGAGCGGGCGGACGGACGCTACTTTGGCTAC	ARLPERADGRYFGY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	217	25	0	89.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  E  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  T  L  E 
                    Query_2014   1    ACCCTGTCCCTCACCTGCGAAGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGACACTGGAG  90
V  89.7% (217/242)  IGHV4-59*08  49   ..................ACT...................G........................................GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  R  G  Y  V  S  Y  S  G  R  T  D  Y  N  P  S  L  K  R  P  V  T  M  S  V  D  T  S  K  N 
                    Query_2014   91   TGGCGTGGGTATGTCTCTTATAGTGGGAGAACCGACTACAACCCCTCCCTCAAGAGGCCAGTCACCATGTCAGTAGACACGTCGAAGAAC  180
V  89.7% (217/242)  IGHV4-59*08  139  ...AT.......A...A...C........C...A......................T.G.........A..............C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  Y  L  K  L  S  S  V  I  A  E  D  T  A  L  Y  Y  C  A  R  L  P  E  R  A  D  G  R  Y 
                    Query_2014   181  CAATTCTACCTGAAACTGAGCTCTGTGATCGCCGAAGACACGGCCCTCTATTATTGTGCGAGGCTCCCGGAGCGGGCGGACGGACGCTAC  270
V  89.7% (217/242)  IGHV4-59*08  229  ..G....C......G.............C.....C..........G.G.....C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  10   --------------------------------------------------------------------.....-----------------  14
J  93.3% (42/45)    IGHJ4*02     2    --------------------------------------------------------------------------------------....  5

                                      -------->                                
                                       F  G  Y  W  G  Q  G  A  L  V  T  V  S  S
                    Query_2014   271  TTTGGCTACTGGGGCCAGGGAGCCCTGGTCACTGTCTCCTC  311
J  93.3% (42/45)    IGHJ4*02     6    ....A................A..........C........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_46276

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            394     7e-112
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_2015  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.4% (271/290)  IGHV1-8*02  6    ..................G..........................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_2015  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.4% (271/290)  IGHV1-8*02  96   ........A.........................................................C.......................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_2015  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.4% (271/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2015  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.4% (271/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_46275

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD5-18*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGTCATGGTTAC	GGAGGAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGTCATGGTTACGGAGGAATTGACTAC	ARYSHGYGGIDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	233	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2016   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (233/243)  IGHV4-59*01  49   ...............................G........G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  S  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  G  T  S  K  N 
                    Query_2016   91   TGGATTGGTTATATCTACTACCGTGGGAGCTCCAACTCCAACCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGGCACGTCCAAGAAC  180
V  95.9% (233/243)  IGHV4-59*01  139  ........G........T...A........A......A......................G...............A.............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  I  D 
                    Query_2016   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGTCATGGTTACGGAGGAATTGAC  270
V  95.9% (233/243)  IGHV4-59*01  229  .............A.................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  86.7% (13/15)    IGHD5-18*01  6    ---------------------------------------------------------------.....CT........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2016   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_46274

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.043
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2017   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2017   91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_2017   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2017   271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_46273

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         366     2e-103
IGHD2-15*01                                                                                           18.0    0.64  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCACCTT	TATTGTAGT	TATGCCAGTATCGGCTGCTTGACCGGATGTTGCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGACCACCTTTATTGTAGTTATGCCAGTATCGGCTGCTTGACCGGATGTTGCCACTACTACGGTATGGACGTC	VRDHLYCSYASIGCLTGCCHYYGMDV	241	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	248	8	7	1	0	87.5
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  V  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_2018     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCGTCAGCAGTGGTTACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  97.2% (241/248)  IGHV4-38-2*02  49   ..................A.................A.....................................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 
                    Query_2018     91   GAGTGGATTGGGAGTATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAG  180
V  97.2% (241/248)  IGHV4-38-2*02  139  .......................................................................A..................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------------------
                                         N  Q  F  S  L  N  L  R  S  M  T  A  A  D  T  A  V  Y  Y  C  V  R  D  H  L  Y  C  S  Y  A 
                    Query_2018     181  AACCAGTTCTCCCTGAACCTGAGGTCTATGACCGCCGCAGACACGGCCGTGTATTACTGTGTGAGAGACCACCTTTATTGTAGTTATGCC  270
V  97.2% (241/248)  IGHV4-38-2*02  229  .................G.....C...G.................................C......----------------------  296
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD2-15*01    5    ---------------------------------------------------------------------------.........------  13

                                        -----CDR3-IMGT--------------------------------->                                 
                                         S  I  G  C  L  T  G  C  C  H  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2018     271  AGTATCGGCTGCTTGACCGGATGTTGCCACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  351
J  100.0% (53/53)   IGHJ6*02       10   ----------------------------.....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_46272

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         366     2e-103
IGHD3-16*02                                                                                           25.7    0.003 
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGCAGCC	TGGGGGAATTATCGTT	C	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGCAGCCTGGGGGAATTATCGTTCCTTTGACTAC	ARAAWGNYRSFDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  D  G  S  I  S  G  G  G  F  Y  W  S  W  L  R  Q  P  P  G  K  G 
                    Query_2019     1    ACCCTGTCCCTCACCTGCACTGTCTCTGATGGCTCCATCAGCGGTGGTGGTTTCTACTGGAGTTGGCTCCGCCAGCCCCCAGGGAAGGGC  90
V  97.2% (241/248)  IGHV4-30-4*01  49   ............................G.............A......A..A.............A.......................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2019     91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  97.2% (241/248)  IGHV4-30-4*01  139  ..........................................................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  A  A  W  G  N  Y  R 
                    Query_2019     181  AAGAACCACTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTTCTGTGCCAGGGCAGCCTGGGGGAATTATCGT  270
V  97.2% (241/248)  IGHV4-30-4*01  229  ........G.................................................A.........----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  93.8% (15/16)    IGHD3-16*02    17   ---------------------------------------------------------------------------.......G.......  31

                                        ----------->                                  
                                         S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2019     271  TCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  93.8% (15/16)    IGHD3-16*02    32   .---------------------------------------------  32
J  100.0% (44/44)   IGHJ4*02       5    --............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_46271

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           310     1e-86
IGHD4-17*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	GACTACG	TAGAGATGGCTTCGAGAACCAATATGGGAGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTACGTAGAGATGGCTTCGAGAACCAATATGGGAGATTTGACTAC	ARLRRDGFENQYGRFDY	237	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	236	114	101	7	6	88.6
CDR3-IMGT (germline)	237	240	4	4	0	0	100
Total	N/A	N/A	246	224	16	6	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2020   1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTGGATTCACCTTTAGTAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (224/246)  IGHV3-23*01  47   .....................C..C..................C..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  T  G  G  S  T  F  Y  A  A  S  V  K  G  R  Y  T  I  S  R  D  N  S  
                    Query_2020   91   AGTGGGTCTCAGGTATTAGCGGCACTGGTGGTAGTACATTCTACGCGGCCTCCGTGAAGGGCCGGTACACCATCTCCAGAGACAATTCCA  180
V  91.1% (224/246)  IGHV3-23*01  137  ............C......T..T.G.........C....A......A.A.................T.......................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K        V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  L  R  R  D  G  F  E  
                    Query_2020   181  A------GGTCTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAGACTACGTAGAGATGGCTTCGAGA  264
V  91.1% (224/246)  IGHV3-23*01  227  .GAACAC.C.G.......................................G...............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD4-17*01  2    ------------------------------------------------------------------.......-----------------  8

                                      GT-------------------->                                  
                                      N  Q  Y  G  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2020   265  ACCAATATGGGAGATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_46270

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           343     2e-96
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCG	ACGGTGAC	ACCGAGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACGGTGACACCGAGAATGACTAC	AADGDTENDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  S  F  G  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_2021   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGACTCACCTTCAGTAGCTTTGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGG  90
V  94.7% (232/245)  IGHV3-33*01  47   ................................T...............A......................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  K  K  Y  Y  T  D  S  V  K  G  R  F  I  I  S  R  D  N  S  
                    Query_2021   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAAGAAATACTATACAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCA  180
V  94.7% (232/245)  IGHV3-33*01  137  ..................................T.........G........................C....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  F  C  A  A  D  G  D  T  E  N  D  
                    Query_2021   181  AGAACACGTTGTATCTGCAGATGAACAGCCTGAGAGTCGACGACACGGCCGTCTATTTCTGTGCGGCCGACGGTGACACCGAGAATGACT  270
V  94.7% (232/245)  IGHV3-33*01  227  ........C..........A................C...G........T..G....A.......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD4-17*01  6    ---------------------------------------------------------------------........-------------  13
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2021   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_151688

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           361     4e-102
IGHD1-7*01                                                                                            16.1    2.2   
IGHJ2*01                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-7*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TCTCAGGGAGTCGG	GGAACTAC	GGAG	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTCTCAGGGAGTCGGGGAACTACGGAGTGGTACTTCGATCTC	ARVSGSRGTTEWYFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2022   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACTTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-74*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  M  K  S  D  G  S  S  T  S  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  A  
                    Query_2022   91   TGTGGGTCTCACGTATGAAAAGCGATGGAAGTAGCACAAGCTACGCGGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (240/249)  IGHV3-74*01  137  ................T..T..T.....G...........................A.................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  S  G  S  R  G  T  
                    Query_2022   181  GGAACACGTTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGTCTCAGGGAGTCGGGGAACTA  270
V  96.4% (240/249)  IGHV3-74*01  227  A.......C............................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-7*01   10   -----------------------------------------------------------------------------------.......  16

                                      T------------------>                                  
                                      T  E  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2022   271  CGGAGTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  100.0% (8/8)     IGHD1-7*01   17   .-----------------------------------------------------  17
J  100.0% (49/49)   IGHJ2*01     5    -----.................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_151689

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD2-21*01                                                                                           10.3    123   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TGTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTGTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFVQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2023   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTTCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (240/248)  IGHV4-31*03  49   ...............................G..C......C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2023   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCT  180
V  96.8% (240/248)  IGHV4-31*03  139  ..................................G.............C......................C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  V  Q  E 
                    Query_2023   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTTCTCTATTTGTCCAAGAA  270
V  96.8% (240/248)  IGHV4-31*03  229  ..........................C.........................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD2-21*01  22   ---------------------------------------------------------------------------.....----------  26

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_2023   271  AGAGTCTACTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.9% (47/48)    IGHJ4*02     1    -------.....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_75471

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           375     3e-106
IGHD6-25*01                                                                                           10.3    120   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCTTT	CAGCG	TCTGACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGATCTTTCAGCGTCTGACCACTTTGACTAC	TTDLSASDHFDY	249	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	248	8	0	96.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_2024   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACGCCTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.9% (248/256)  IGHV3-15*01  47   .......T....................................A............G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  N  T  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_2024   91   AGTGGGTTGGCCGTATTAATACCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  96.9% (248/256)  IGHV3-15*01  137  ...................A.G....................................................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------CDR3-IMG
                                      D  S  K  N  T  L  Y  L  Q  L  S  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  D  L  S  A  S  
                    Query_2024   181  ATTCAAAAAACACGCTGTATTTGCAACTGAGCAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATCTTTCAGCGTCTG  270
V  96.9% (248/256)  IGHV3-15*01  227  ....................C.....A...A.............................................--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (5/5)     IGHD6-25*01  9    ---------------------------------------------------------------------------------.....----  13

                                      T------------>                                  
                                      D  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2024   271  ACCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (45/45)   IGHJ4*02     4    ---.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_345123

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-20*01                                                                                           367     6e-104
IGHD6-13*01                                                                                           27.6    8e-04 
IGHJ6*02                                                                                              106     3e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-20*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GG	ATAGCAGCAGCTGCTAC	CAACTCCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGATAGCAGCAGCTGCTACCAACTCCCTCTACTACTTCTACGGTATGGACGTC	ARGIAAAATNSLYYFYGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  D  Y  A  M  M  W  V  R  Q  A  P  G  K  G  L  
                    Query_2025   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGAGGATTATGCCATGATGTGGGTCCGCCAAGCTCCCGGGAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-20*01  47   ...........................................T.......G.....GC.................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  N  G  G  S  A  G  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2025   91   AGTGGGTCTCTGGTATTAATTGGAATGGTGGTAGCGCAGGTTATGGAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (242/249)  IGHV3-20*01  137  ...................................A.........C............................................  226
                                      E  W  V  S  G  I  N  W  N  G  G  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R  G  I  A  A  A  A  T  
                    Query_2025   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCCTTGTATCACTGTGCGAGAGGGATAGCAGCAGCTGCTACCA  270
V  97.2% (242/249)  IGHV3-20*01  227  .....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R                       
D  94.1% (16/17)    IGHD6-13*01  5    -----------------------------------------------------------------------.............G...--  21

                                      R3-IMGT------------------------>                                 
                                      N  S  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2025   271  ACTCCCTCTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
J  98.3% (57/58)    IGHJ6*02     5    -------........A.................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_151680

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*11                                                                                           392     2e-111
IGHD2-2*01                                                                                            18.0    0.69  
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*11	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCCACCCGCTGTTGTACTTC	TACCAACTGCTA	CAGGGGGGA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCCACCCGCTGTTGTACTTCTACCAACTGCTACAGGGGGGAACAACTGGTTCGACCCC	ARGPPAVVLLPTATGGNNWFDP	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  D  T  F  S  S  Y 
                    Query_2026   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGTAAGGCTTCTGGAGACACCTTCAGCAGCTAT  91
V  93.4% (270/289)  IGHV1-69*11  7    .................G...............................A.........C.............G................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  L  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  T  I  I  P  V  L  G  T  A  N  Y  A  Q 
                    Query_2026   92   GGTCTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTGGAGTGGATGGGAACCATCATCCCTGTCCTTGGTACAGCGAACTACGCACAG  181
V  93.4% (270/289)  IGHV1-69*11  97   .C.A..................................T.............GG.........A.............A............  186
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  T  A  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  F  Q  G  R  L  T  M  T  A  D  V  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_2026   182  AGGTTCCAGGGCAGACTCACGATGACCGCGGACGTTTCCACGAGCACAGCCTACATGGAGCTGAGAAGCCTAAGATCTGACGACACGGCC  271
V  93.4% (270/289)  IGHV1-69*11  187  .A.............G.......T..........AA.............................C.....G........G.........  276
                                       K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><----------------------------CDR3-IMGT--------------------------->            
                                       V  Y  Y  C  A  R  G  P  P  A  V  V  L  L  P  T  A  T  G  G  N  N  W  F  D  P  W  G  Q  G 
                    Query_2026   272  GTGTATTACTGTGCGAGAGGTCCACCCGCTGTTGTACTTCTACCAACTGCTACAGGGGGGAACAACTGGTTCGACCCCTGGGGCCAGGGA  361
V  93.4% (270/289)  IGHV1-69*11  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  91.7% (11/12)    IGHD2-2*01   16   ----------------------------------------.....G......--------------------------------------  27
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------.............................  29

                                                            
                                       T  L  V  T  V  S  S  
                    Query_2026   362  ACCCTGGTCACCGTCTCCTCAG  383
J  100.0% (51/51)   IGHJ5*02     30   ......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_75470

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         352     3e-99
IGHD2-21*02                                                                                           16.1    2.1  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCAAA	TGGTGACT	TAC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATTCAAATGGTGACTTACACTAC	ARDSNGDLHY	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	238	13	0	94.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_2027     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTAATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  94.8% (238/251)  IGHV4-30-4*01  49   ..................A.............................G.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  S  S  S  G  T  T  Y  Y  N  P  S  L  E  S  R  I  T  I  S  L  D  T  S 
                    Query_2027     91   CTGGAGTGGATTGGGTACATCTCTTCCAGTGGGACCACCTACTACAACCCCTCCCTCGAGAGTCGAATTACCATATCGCTAGACACGTCC  180
V  94.8% (238/251)  IGHV4-30-4*01  139  ......................A..A........G...............G......A........G..........AG...........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                         K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  N  G  D  L  H 
                    Query_2027     181  AAGAACCAGTTCTCCCTGAATCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGATTCAAATGGTGACTTACAC  270
V  94.8% (238/251)  IGHV4-30-4*01  229  ....................G....G...............A.............................-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD2-21*02    13   -----------------------------------------------------------------------------........-----  20
J  100.0% (39/39)   IGHJ4*02       10   ----------------------------------------------------------------------------------------..  11

                                        -->                                  
                                         Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2027     271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (39/39)   IGHJ4*02       12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_151684

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     8e-121
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGGACAC	TGTAGTAGTGCCATCTGCGATG	GACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTAC	ARHMGHCSSAICDGPDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	281	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  Q  K  P  G  E  A  L  K  I  S  C  K  G  S  G  Y  S  F  G  S  Y
                    Query_2028   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGCAAAAGCCGGGGGAGGCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCAGTTA  90
V  96.6% (281/291)  IGHV5-51*01  6    ............................A.......C......T......................................AC...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_2028   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.6% (281/291)  IGHV5-51*01  96   ........G.................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_2028   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  96.6% (281/291)  IGHV5-51*01  186  .............................C.........C.................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  M  G  H  C  S  S  A  I  C  D  G  P  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_2028   271  CATGTATTACTGTGCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  96.6% (281/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  86.4% (19/22)    IGHD2-2*01   8    -------------------------------.........A...G....T...-------------------------------------  29
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_2028   361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_151685

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           357     1e-100
IGHD1-26*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGCCCGCTGCCCGTG	GTGGGAGCTA	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATCAGCCCGCTGCCCGTGGTGGGAGCTATGACTAC	ARDQPAARGGSYDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2029   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATACCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGC  90
V  95.6% (239/250)  IGHV3-74*01  47   ..........................................G..G...........................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      L  W  V  S  R  I  N  T  V  G  T  D  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2029   91   TGTGGGTCTCACGTATTAATACTGTTGGGACTGACATAGGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (239/250)  IGHV3-74*01  137  .....................G..A.....G.AG..C.A...................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Q  P  A  A  R  G  
                    Query_2029   181  AGAACACGCTGTATCTGCAAATGGACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGATCAGCCCGCTGCCCGTGGTG  270
V  95.6% (239/250)  IGHV3-74*01  227  .......................A..............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD1-26*01  7    ---------------------------------------------------------------------------------------...  9

                                      ------------->                                  
                                      G  S  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2029   271  GGAGCTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (10/10)   IGHD1-26*01  10   .......-----------------------------------------  16
J  100.0% (41/41)   IGHJ4*02     8    -------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_151686

Length=315
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            358     3e-101
IGHD2-8*01                                                                                            12.2    29    
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	TGGTGT	GCGG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGGTGTGCGG	ASGVR	243	257	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  S  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2030  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAACAGTTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (238/247)  IGHV3-7*01  47   .............................................G.TA.........C...............................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  P  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2030  91   AGTGGGTGGCCAACATAAAGCCAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (238/247)  IGHV3-7*01  137  .....................A....................................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--CDR3-IMGT-->             
                                     K  S  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  G  V  R  W  G  Q  G  
                    Query_2030  181  AAAGCTCACTGTTTCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGTGGTGTGCGGTGGGGCCAGGGAA  270
V  96.4% (238/247)  IGHV3-7*01  227  .G.A........A.......................C..............................-----------------------  293
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD2-8*01  16   -------------------------------------------------------------------......-----------------  21
J  100.0% (34/34)   IGHJ4*02    15   -----------------------------------------------------------------------------.............  27

                                                          
                                     T  L  V  T  V  S  S  
                    Query_2030  271  CCCTGGTCACCGTCTCCTCAG  291
J  100.0% (34/34)   IGHJ4*02    28   .....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30410208


Query= Query_151687

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           358     3e-101
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	GGGTTGAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTTGATTATGGACGTC	ARGLIMDV	244	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  S  S  G  T  Y  D  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_2031   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTCAGCAGTGGTACTTACGACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.0% (239/249)  IGHV4-39*01  49   ....................................A........A...G....T...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  F  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  F  V  D  T  S 
                    Query_2031   91   CTGGAGTGGATTGGGACTTTTTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATTCGTAGACACGTCC  180
V  96.0% (239/249)  IGHV4-39*01  139  ................G.A.C.....................................A.................C.............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>   
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  R  A  V  Y  Y  C  A  R  G  L  I  M  D  V  W 
                    Query_2031   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACAGGGCTGTGTATTACTGTGCGAGAGGGTTGATTATGGACGTCTGG  270
V  96.0% (239/249)  IGHV4-39*01  229  ..............................................C......................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  100.0% (43/43)   IGHJ6*02     20   -----------------------------------------------------------------------------.............  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_2031   271  GGCCAAGGGACCACGGTCACCGTCTCCTCA  300
J  100.0% (43/43)   IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_71016

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD6-19*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGG	TAGCAGTGGCTGGTAC	GGGAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGTAGCAGTGGCTGGTACGGGACTGACTAC	ARDGSSGWYGTDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2032   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTGGTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ........................................G.A...............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  N  S  E  S  T  N  N  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  K  N 
                    Query_2032   91   TGGATTGGTAACATTTATAATAGTGAGAGCACCAATAACAACCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAAGAAC  180
V  93.1% (228/245)  IGHV4-59*01  139  ........GT.T..C...T.C....G.........CT.......................G.............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  G  S  S  G  W  Y  G  T 
                    Query_2032   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCATTTATTATTGTGCGAGAGACGGTAGCAGTGGCTGGTACGGGACT  270
V  93.1% (228/245)  IGHV4-59*01  229  .............A...............................G.G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (16/16)   IGHD6-19*01  6    --------------------------------------------------------------------................------  21
J  95.1% (39/41)    IGHJ4*02     8    -----------------------------------------------------------------------------------------.  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_2032   271  GACTACTGGGGCCAGGGCATCCTGGTCACCGTCTCCTCAG  310
J  95.1% (39/41)    IGHJ4*02     9    .................A.C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_148196

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           389     2e-110
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ1*01                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGAGTGGCCAC	AGCAGCAGCTGGT	GGACAT	CTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGAGTGGCCACAGCAGCAGCTGGTGGACATCTGAGTACTTCCAGGAG	ARMSGHSSSWWTSEYFQE	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  P  S  H
                    Query_2033   1    GCAGCTGGTGCAGTCTGGAGCAGAGCTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTCCCCAGCCA  90
V  93.1% (269/289)  IGHV5-51*03  6    .........................G....A..................................................TA.....T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  T  P  G  K  G  L  E  W  M  G  L  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_2033   91   TTGGATCGGCTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGACTCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  93.1% (269/289)  IGHV5-51*03  96   C......................T...........................GA............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  K  G  Q  V  T  I  S  V  D  K  S  I  N  T  A  F  L  R  W  A  S  L  K  A  S  D  S  G
                    Query_2033   181  GTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAACACCGCCTTCCTGCGCTGGGCCAGCCTGAAGGCCTCGGACAGCGG  270
V  93.1% (269/289)  IGHV5-51*03  186  .......C.....................C..............G........A.....AG...AG....................C..C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  M  S  G  H  S  S  S  W  W  T  S  E  Y  F  Q  E  W  G  Q  G  T  L  V  S
                    Query_2033   271  CATGTATTACTGTGCGAGAATGAGTGGCCACAGCAGCAGCTGGTGGACATCTGAGTACTTCCAGGAGTGGGGCCAGGGCACCCTGGTCTC  360
V  93.1% (269/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (13/13)   IGHD6-13*01  7    -------------------------------.............----------------------------------------------  19
J  92.2% (47/51)    IGHJ1*01     2    --------------------------------------------------....A.........C.C.....................A.  41

                                                 
                                        V  S  S  
                    Query_2033   361  CGTCTCCTCAG  371
J  92.2% (47/51)    IGHJ1*01     42   ...........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_148194

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         282     4e-78
IGHD3-10*01                                                                                           27.6    7e-04
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CC	TGGTTCGGGGAATTTTTATA	TGTC	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGACCTGGTTCGGGGAATTTTTATATGTCTGCTTTTGAGATT	SRPGSGNFYMSAFEI	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	96	18	0	84.2
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	213	33	0	86.6


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  D  S  S  V  S  S  G  S  F  W  A  W  I  R  Q  S  P  G  R  G  L 
                    Query_2034     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGATTCCTCCGTTAGTAGTGGTTCCTTCTGGGCCTGGATCCGGCAGTCCCCAGGGAGGGGACTG  90
V  86.6% (213/246)  IGHV4-38-2*01  49   ............................G..A....A.C..C.......A..A.....G.............C.........A...G...  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  H  Q  S  G  S  T  Y  Y  S  P  S  F  E  S  R  V  T  M  S  F  D  T  S  Q 
                    Query_2034     91   GAGTGGATTGGGAGTATCCATCAGAGTGGGAGTACCTACTACAGCCCGTCTTTCGAGAGTCGAGTCACCATGTCTTTTGACACGTCTCAG  180
V  86.6% (213/246)  IGHV4-38-2*01  139  ..................T....T........C..........A......CC..A................A..AG.A........CA..  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                         R  Q  F  S  L  Q  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  S  R  P  G  S  G  N  F  Y  M 
                    Query_2034     181  CGTCAGTTCTCCCTGCAGTTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTTTTGTTCGAGACCTGGTTCGGGGAATTTTTATATG  270
V  86.6% (213/246)  IGHV4-38-2*01  229  AAC............A..C...G................................AC...G.....------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  90.0% (18/20)    IGHD3-10*01    10   --------------------------------------------------------------------...........G..A.....--  29

                                        -------------->                                  
                                         S  A  F  E  I  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_2034     271  TCTGCTTTTGAGATTTGGGGCCAAGGGACAAGGGTCACCGTCTCTTCAG  319
J  93.6% (44/47)    IGHJ3*02       4    --.........T..C................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_148195

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  A  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2035   1    ACCCTGTCCCTCACCTGCACTGCCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.2% (241/248)  IGHV4-31*03  49   ......................T...........C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2035   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.2% (241/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_2035   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.2% (241/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2035   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_148192

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            297     7e-83
IGHD2-21*01                                                                                           12.2    31   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	TGGTGA	AGTATTCCTTGGATC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGGTGAAGTATTCCTTGGATCACTTTGACCAC	ARLVKYSLDHFDH	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	20	7	0	74.1
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	219	29	0	88.3


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  S  V  S  G  D  S  I  T  N  D  H  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_2036   1    GGTCCCTGAGACTCTCCTGCAGTGTCTCTGGTGACTCCATTACCAATGATCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  88.3% (219/248)  IGHV4-4*02   47   ..A.....TCC...A.....GC...........G......C.G..G.AG.A.......................................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  R  S  G  S  T  T  Y  N  P  S  L  Q  S  R  V  A  F  S  V  D  K  S  
                    Query_2036   91   TGGAGTGGATTGGAGAAATCTATCGTAGTGGGAGCACCACTTACAACCCGTCCCTTCAGAGTCGAGTCGCCTTCTCAGTAGACAAGTCCA  180
V  88.3% (219/248)  IGHV4-4*02   137  .............G..........A..............AC..............CA...........A..A.A................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  Q  F  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  V  K  Y  S  L  D  
                    Query_2036   181  AGAACCAGTTCTCCCTGAGTCTGAGATCTGTGACCGCCGCCGATACGGCCGTATATTACTGTGCGAGATTGGTGAAGTATTCCTTGGATC  270
V  88.3% (219/248)  IGHV4-4*02   227  ..................AG.....C..............G..C........G...............----------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*01  13   ---------------------------------------------------------------------......---------------  18

                                      ---------->                                  
                                      H  F  D  H  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_2036   271  ACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  315
J  95.6% (43/45)    IGHJ4*02     4    ........T................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_266967

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           371     7e-105
IGHD3-10*01                                                                                           14.1    9.6   
IGHJ2*01                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGCC	ACTATGG	GGATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATC	ARSHYGDAYWYLDI	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	97	17	0	85.1
CDR3-IMGT (germline)	291	295	5	5	0	0	100
Total	N/A	N/A	293	265	28	0	90.4


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T 
                    Query_2037   3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATCTTCACC  92
V  90.4% (265/293)  IGHV1-18*01  1    .....T.................................................................T..........C...T...  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  F  E  W  M  G  W  V  S  P  Y  N  G  N  T  A  Y 
                    Query_2037   93   AGTTATGGAATCACTTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGATGGGTCAGCCCTTACAATGGTAACACAGCCTAC  182
V  90.4% (265/293)  IGHV1-18*01  91   ..C.....T....GC...........................C.................A.....G.................AA...T  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  E  K  F  Q  G  R  F  T  V  A  T  E  T  S  T  N  T  A  F  M  E  L  R  S  L  K  A  D  D 
                    Query_2037   183  GCAGAGAAGTTCCAGGGCAGATTCACCGTGGCCACAGAGACTTCCACGAACACAGCCTTCATGGAGCTGCGGAGTCTGAAAGCTGACGAC  272
V  90.4% (265/293)  IGHV1-18*01  181  ...C.....C...........G.....A..A.......C..A.......G........A..........A....C....G.T........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  S  H  Y  G  D  A  Y  W  Y  L  D  I  W  G  R  G  T  L  V  T  V  S 
                    Query_2037   273  ACGGCCGTCTATTACTGTGCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATCTGGGGCCGTGGCACCCTGGTCACTGTCTCC  362
V  90.4% (265/293)  IGHV1-18*01  271  ........G..............-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (7/7)     IGHD3-10*01  6    ----------------------------.......-------------------------------------------------------  12
J  96.2% (51/53)    IGHJ2*01     1    -----------------------------------------..........T.....C................................  49

                                          
                                       S  
                    Query_2037   363  TCAG  366
J  96.2% (51/53)    IGHJ2*01     50   ....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_138199

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           389     2e-110
IGHD2-8*01                                                                                            19.9    0.18  
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGGTAGG	ATGGTGTATG	ATTCAAGGGG	CTGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGGTAGGATGGTGTATGATTCAAGGGGCTGCTTCGACCCC	ARLGRMVYDSRGCFDP	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  N  Y
                    Query_2038   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCCGGATACACTTTTAGCAACTA  90
V  93.1% (269/289)  IGHV5-51*03  6    ..............................A......................................T.......GC....C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  S  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_2038   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGCTGGGGAGTATCTATCCCGGTGACTCTGATACCAGATACAACCC  180
V  93.1% (269/289)  IGHV5-51*03  96   ..............................................A......TC........T......................G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        T  F  Q  G  R  V  T  M  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  K  L  E  A  S  D  T  A
                    Query_2038   181  GACCTTCCAAGGCCGGGTCACCATGTCAGCCGACAAGTCCATCAACACCGCCTACCTCCAGTGGAGCAAGCTGGAGGCCTCGGACACCGC  270
V  93.1% (269/289)  IGHV5-51*03  186  .T............A.........C...................G............G..........GC...A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        I  Y  Y  C  A  R  L  G  R  M  V  Y  D  S  R  G  C  F  D  P  W  G  Q  G  T  L  V  T  V  S
                    Query_2038   271  CATCTATTACTGTGCGAGACTGGGTAGGATGGTGTATGATTCAAGGGGCTGCTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTC  360
V  93.1% (269/289)  IGHV5-51*03  276  ...G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD2-8*01   15   ----------------------------..........----------------------------------------------------  24
J  97.9% (46/47)    IGHJ5*02     5    ------------------------------------------------...G......................................  46

                                           
                                        S  
                    Query_2038   361  CTCAG  365
J  97.9% (46/47)    IGHJ5*02     47   .....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_148199

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           399     2e-113
IGHD7-27*01                                                                                           14.1    8.9   
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCA	AACTGGG	AACTCAAGATC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGAGGTCAAACTGGGAACTCAAGATCCAACTGGTTCGACCCC	SRGQTGNSRSNWFDP	261	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	24	0	0	100
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	21	0	0	100
FR3-IMGT	147	260	114	112	2	0	98.2
CDR3-IMGT (germline)	261	267	7	6	1	0	85.7
Total	N/A	N/A	267	261	6	0	97.8


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  
                    Query_2039   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAACTGGATCCGGC  90
V  97.8% (261/267)  IGHV4-59*01  26   ................T.............................................................G...........  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_2039   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGATATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  97.8% (261/267)  IGHV4-59*01  116  ...............................G..........................................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  D  Y  C  S  R  G  
                    Query_2039   181  TATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGGATTACTGTTCGAGAGGTC  270
V  97.8% (261/267)  IGHV4-59*01  206  ....................................A..................................T........G......---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      --------CDR3-IMGT----------------->                                  
                                      Q  T  G  N  S  R  S  N  W  F  D  P  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_2039   271  AAACTGGGAACTCAAGATCCAACTGGTTCGACCCCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  339
D  100.0% (7/7)     IGHD7-27*01  3    -.......-------------------------------------------------------------  9
J  98.0% (49/50)    IGHJ5*02     2    -------------------............................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_218431

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           291     5e-81
IGHD1-20*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTAAACCGGGATCGT	GGTATAA	AGGCTACG	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAAACCGGGATCGTGGTATAAAGGCTACGACTGCTTTGACTAC	ARLKPGSWYKGYDCFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	217	31	0	87.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  S  H  G  L  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2040   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCAGGATTTACTTTCAGTAGTCATGGCCTGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.5% (217/248)  IGHV3-21*01  47   ........................C...T.....C..C........CT..A..A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  P  R  S  D  Y  K  F  Y  T  P  S  V  R  G  R  F  T  I  S  R  D  N  P  
                    Query_2040   91   AGTGGGTCTCGTCCATTACTCCTCGAAGCGATTACAAATTCTACACACCCTCAGTGAGGGGCCGGTTCACCATCTCCAGAGACAACCCCA  180
V  87.5% (217/248)  IGHV3-21*01  137  ..........A.......G.AG.A.T..TAG.....T..A....G..GA........A......A.....................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  V  Y  L  E  M  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  L  K  P  G  S  W  Y  
                    Query_2040   181  AGAACTCCGTGTATTTGGAAATGCACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGACTTAAACCGGGATCGTGGTATA  270
V  87.5% (217/248)  IGHV3-21*01  227  .......AC.....C..C.....A....C.......................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-20*01  1    ------------------------------------------------------------------------------------......  6

                                      GT-------------------->                                  
                                      K  G  Y  D  C  F  D  Y  W  G  P  G  T  L  V  S  V  S  S  
                    Query_2040   271  AAGGCTACGACTGCTTTGACTACTGGGGCCCGGGAACCCTGGTCAGCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD1-20*01  7    .--------------------------------------------------------  7
J  93.8% (45/48)    IGHJ4*02     1    ---------...A.................A..............C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_144124

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           272     2e-75
IGHD1-26*01                                                                                           12.2    30   
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAC	GGGGGCTAC	CCCTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACGGGGGCTACCCCTATGATGCTCTTGACATC	ARDDGGYPYDALDI	231	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	17	13	11	2	0	84.6
CDR1-IMGT	18	41	24	18	6	0	75
FR2-IMGT	42	92	51	46	5	0	90.2
CDR2-IMGT	93	116	24	20	4	0	83.3
FR3-IMGT	117	230	114	101	13	0	88.6
CDR3-IMGT (germline)	231	238	8	8	0	0	100
Total	N/A	N/A	234	204	30	0	87.2


Alignments

                                      <-FR1-IMGT--><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-
                                        C  A  A  P  G  F  S  I  R  D  Y  A  V  H  W  V  R  Q  A  P  G  T  G  L  D  W  V  A  L  I
                    Query_2041   5    CTGTGCAGCCCCAGGATTCAGTATCAGAGACTATGCTGTGCACTGGGTCCGCCAGGCTCCAGGCACGGGGCTGGACTGGGTGGCTCTTAT  94
V  87.2% (204/234)  IGHV3-30*04  63   ..........T.T.......CCT....TAG.......A...........................A.........G........AG....  152
                                        C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I

                                      ------CDR2-IMGT------><----------------------------------------------------FR3-IMGT-------
                                        S  Y  D  G  T  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  E  T  V  Y  L
                    Query_2041   95   ATCATATGATGGCACGAAGAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCAGGGAGACGGTGTATCT  184
V  87.2% (204/234)  IGHV3-30*04  153  ............A.GT..T..................................................T....A.A.C...C.......  242
                                        S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L

                                      ---------------------------------------------><----------------CDR3-IMGT--------------->  
                                        E  M  S  N  L  G  A  D  D  T  A  V  Y  F  C  A  R  D  D  G  G  Y  P  Y  D  A  L  D  I  G
                    Query_2041   185  GGAAATGAGCAACCTGGGGGCTGACGACACGGCTGTCTATTTCTGTGCGAGAGATGACGGGGGCTACCCCTATGATGCTCTTGACATCGG  274
V  87.2% (204/234)  IGHV3-30*04  243  .C......A..G....A.A.....G...........G....A............------------------------------------  296
                                        Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                       
D  88.9% (8/9)      IGHD1-26*01  9    ----------------------------------------------------------...A.....-----------------------  17
J  94.0% (47/50)    IGHJ3*02     1    ------------------------------------------------------------------------.......T....T...T.  18

                                                                      
                                        G  Q  G  T  M  V  T  V  S  S  
                    Query_2041   275  GGGCCAAGGGACAATGGTCACCGTCTCTTCAG  306
J  94.0% (47/50)    IGHJ3*02     19   ................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_218435

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD1-26*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCGA	TATACTGGGAGCTAC	CGAC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCGATATACTGGGAGCTACCGACATGCTTTTGATATC	ARFRYTGSYRHAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2042   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTATTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  95.5% (232/243)  IGHV4-59*01  49   ...........................................G...C.A.......................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       Y  I  G  Y  I  S  Y  S  G  S  T  D  Y  N  P  S  L  K  S  G  V  T  I  S  L  D  T  S  K  N 
                    Query_2042   91   TATATTGGGTATATCTCTTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTGGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  95.5% (232/243)  IGHV4-59*01  139  .GG.............A................A.......................C..............G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  R  Y  T  G  S  Y  R  H 
                    Query_2042   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATTCCGATATACTGGGAGCTACCGACAT  270
V  95.5% (232/243)  IGHV4-59*01  229  .............A.................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD1-26*01  3    ---------------------------------------------------------------------....G..........------  17
J  95.6% (43/45)    IGHJ3*02     3    ----------------------------------------------------------------------------------------..  4

                                      ----------->                               
                                       A  F  D  I  W  S  Q  G  T  M  V  A  V  S  
                    Query_2042   271  GCTTTTGATATCTGGAGCCAAGGGACAATGGTCGCCGTCTCTT  313
J  95.6% (43/45)    IGHJ3*02     5    ...............G.................A.........  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_218437

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           304     1e-84
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AATATGGAACCCCCTGGGCAAAGTGA	TGGCTGGT	TT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAATATGGAACCCCCTGGGCAAAGTGATGGCTGGTTTTACTTTGACCAC	AKNMEPPGQSDGWFYFDH	237	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	24	0	0	100
FR2-IMGT	48	98	51	46	5	0	90.2
CDR2-IMGT	99	122	24	18	6	0	75
FR3-IMGT	123	236	114	108	6	0	94.7
CDR3-IMGT (germline)	237	242	6	6	0	0	100
Total	N/A	N/A	230	212	18	0	92.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  S  S  Y  A  V  S  W  V  R  L  A  P  G  K  G  L  E  W  V  A  S  I  
                    Query_2043   13   GTACAGCCTCTGGATTCACCTTTAGCAGCTATGCCGTGAGCTGGGTCCGTCTGGCTCCAGGGAAGGGGCTGGAGTGGGTCGCATCTATTA  102
V  92.2% (212/230)  IGHV3-23*01  65   ..G................................A.............C.A............................T..G......  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  L  G  G  R  N  T  Y  Y  A  D  F  V  K  G  R  F  T  I  S  R  D  N  S  R  N  T  L  S  L  
                    Query_2043   103  GTCTGGGTGGTCGTAACACATACTACGCAGACTTCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAGAAACACGCTGTCTCTGC  192
V  92.2% (212/230)  IGHV3-23*01  155  ..GGTA.....G...G.................C......................................AG..........A.....  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><----------------------CDR3-IMGT--------------
                                      Q  M  N  S  L  R  T  E  D  T  A  V  Y  Y  C  A  K  N  M  E  P  P  G  Q  S  D  G  W  F  Y  
                    Query_2043   193  AAATGAACAGCCTGAGAACCGAGGACACGGCCGTCTATTACTGTGCGAAAAATATGGAACCCCCTGGGCAAAGTGATGGCTGGTTTTACT  282
V  92.2% (212/230)  IGHV3-23*01  245  .................G................A...............----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (8/8)     IGHD6-19*01  12   ----------------------------------------------------------------------------........------  19
J  95.7% (44/46)    IGHJ4*02     3    --------------------------------------------------------------------------------------....  6

                                      ------->                                  
                                      F  D  H  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_2043   283  TTGACCACTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  324
J  95.7% (44/46)    IGHJ4*02     7    .....T....................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_218436

Length=316
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           372     2e-105
IGHD7-27*01                                                                                           12.2    29    
IGHJ1*01                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD7-27*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CC	CTGGGG	N/A	GCACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCTGGGGGCAC	ARPWGH	243	260	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	243	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_2044   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (243/248)  IGHV3-11*01  47   .................................................C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  S  G  S  T  K  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2044   91   AGTGGGTTTCATACATTAGTACTAGTGGTAGTACCAAACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  98.0% (243/248)  IGHV3-11*01  137  .....................G..............T.T...................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----CDR3-IMGT--->          
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  W  G  H  W  G  Q  
                    Query_2044   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGACCCTGGGGGCACTGGGGCCAGG  270
V  98.0% (243/248)  IGHV3-11*01  227  ..........................................................C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD7-27*01  5    ----------------------------------------------------------------------......--------------  10
J  97.4% (37/38)    IGHJ1*01     15   ----------------------------------------------------------------------------..............  28

                                                              
                                      G  T  L  V  T  V  S  S  
                    Query_2044   271  GCACCCTGGTCACTGTCTCCTCAG  294
J  97.4% (37/38)    IGHJ1*01     29   .............C..........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30515799


Query= Query_218439

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           307     1e-85
IGHD3-16*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAGGCCCCGG	TTACCTTTGGGGGAGT	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGAGGCCCCGGTTACCTTTGGGGGAGTCTAC	ARDEAPVTFGGVY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  D  S  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2045   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCGTCAGTGATTCTGGCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  89.2% (223/250)  IGHV3-33*01  47   ......................................T.....AGC.A......G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  A  I  W  Y  D  G  D  K  K  F  Y  T  D  S  V  K  D  R  F  T  I  S  R  D  N  Y  
                    Query_2045   91   AGTGGCTGGCTGCTATTTGGTATGATGGGGATAAAAAATTCTATACAGACTCCGTGAAGGACCGATTCACCATCTCCAGAGACAATTACA  180
V  89.2% (223/250)  IGHV3-33*01  137  .....G....A.T...A...........AAG...T....A....G...............G..........................C..  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      R  N  T  V  Y  L  Q  M  D  G  L  R  A  D  D  T  G  V  Y  Y  C  A  R  D  E  A  P  V  T  F  
                    Query_2045   181  GGAATACGGTGTACCTGCAAATGGACGGCCTGAGAGCCGACGACACGGGTGTCTATTACTGTGCGAGAGATGAGGCCCCGGTTACCTTTG  270
V  89.2% (223/250)  IGHV3-33*01  227  A...C...C....T.........A..A.............G.......C...G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.8% (15/16)    IGHD3-16*01  10   ---------------------------------------------------------------------------------....G....  18

                                      ---------->                                  
                                      G  G  V  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2045   271  GGGGAGTCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
D  93.8% (15/16)    IGHD3-16*01  19   .......--------------------------------------  25
J  100.0% (38/38)   IGHJ4*02     11   -------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_218438

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           353     9e-100
IGHD6-19*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGGA	AGCAGTGG	N/A	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGGAAGCAGTGGCTATTACCACGGTATGGACGTC	ARSGSSGYYHGMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2046   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGGAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (237/248)  IGHV3-33*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  T  N  E  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  E  N  S  
                    Query_2046   91   AGTGGGTGGCCGTTATATGGTATGATGGAACTAATGAACATTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGAGAATTCCA  180
V  95.6% (237/248)  IGHV3-33*01  137  ..........A...................G....A..T.C....C....................................C.......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  S  G  S  S  G  Y  Y  
                    Query_2046   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGATCGGGAAGCAGTGGCTATTACC  270
V  95.6% (237/248)  IGHV3-33*01  227  ....................................C...............G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  7    --------------------------------------------------------------------------........--------  14
J  96.2% (50/52)    IGHJ6*02     8    ----------------------------------------------------------------------------------...C...T  15

                                      ------------->                              
                                      H  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_2046   271  ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  314
J  96.2% (50/52)    IGHJ6*02     16   ............................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_197650

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           294     6e-82
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTGG	AGCAGTGGCTGGT	CGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTGGAGCAGTGGCTGGTCGGTTTGACTTC	AREGGAVAGRFDF	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  R  G  S  V  S  S  G  G  Y  H  W  S  W  I  R  Q  T  P  G  R  G  
                    Query_2047   4    CCCTGAGACTCTCCTGCTCTGTCTCTCGTGGCTCCGTCAGCAGTGGGGGTTATCACTGGTCCTGGATCCGGCAGACCCCAGGCAGGGGAC  93
V  87.6% (219/250)  IGHV4-61*08  50   .....TCC...A.....A........G...................T.....CT.....AG.............C.......G.A.....  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  H  F  T  G  T  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  A  D  M  S  
                    Query_2047   94   TGGAGTGGATTGGCTATATCCACTTCACTGGGACCACCAAGTACAACCCCTCCCTTAAGAGTCGAGTCAGCATATCAGCAGACATGTCCA  183
V  87.6% (219/250)  IGHV4-61*08  140  .............G......T.T.A..G.....G......C..............C.............C........T.....C.....  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  A  V  A  G  
                    Query_2047   184  AGAACCAATTCTCCCTGAACCTGAGGTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTGCGAGAGAGGGTGGAGCAGTGGCTGGTC  273
V  87.6% (219/250)  IGHV4-61*08  230  .......G...........G.....C..........................G..T..C...........--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD6-19*01  7    ----------------------------------------------------------------------------.............-  19

                                      ---------->                                  
                                      R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2047   274  GGTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (42/43)    IGHJ4*02     6    --.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_43317

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         339     2e-95
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	N/A	N/A	TCACCTGCCAACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGATCACCTGCCAACCCCTACTACCACGCTCTGGACGTC	ARSPANPYYHALDV	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  V  Y  I  S  N  G  G  Y  S  W  T  W  I  R  Q  P  P  G  R  G 
                    Query_2048     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTACATCAGCAATGGTGGTTACTCCTGGACCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  93.6% (233/249)  IGHV4-30-2*01  49   ..................G............G..C........G.................G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Q  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  R  S 
                    Query_2048     91   CTGGAGTGGATTGGGTACATCTATCAAAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGCGTCACCATATCGGTAGACAGGTCC  180
V  93.6% (233/249)  IGHV4-30-2*01  139  ..........................T...............................A......A...........A............  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  V  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  A  N  P  Y  Y 
                    Query_2048     181  AAGAACCAGTTCTCCGTTAACTTGAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGATCACCTGCCAACCCCTACTAC  270
V  93.6% (233/249)  IGHV4-30-2*01  229  ...............C.G..GC....C..........................G...............---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  92.7% (51/55)    IGHJ6*02       8    -----------------------------------------------------------------------------------.......  14

                                        -------------->                                 
                                         H  A  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2048     271  CACGCTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  318
J  92.7% (51/55)    IGHJ6*02       15   T...G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_43314

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           375     3e-106
IGHJ6*02                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	261	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	22	2	0	91.7
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	20	1	0	95.2
FR3-IMGT	147	260	114	107	7	0	93.9
CDR3-IMGT (germline)	261	268	8	7	1	0	87.5
Total	N/A	N/A	268	254	14	0	94.8


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  
                    Query_2049   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGC  90
V  94.8% (254/268)  IGHV4-59*01  26   ................T.............................................A...G...........G...........  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  
                    Query_2049   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCA  180
V  94.8% (254/268)  IGHV4-59*01  116  ...............................G..................A...............C.......................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  K  S  K  N  Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  H  Y  C  A  R  E  
                    Query_2049   181  TATCAGTAGACAAGTCCAAGAACCAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTACATTACTGTGCCAGAGAGG  270
V  94.8% (254/268)  IGHV4-59*01  206  ............C...................C....G.....C..........................GT..........G.....--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      ----CDR3-IMGT------------>                                 
                                      A  Y  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_2049   271  CCTACTCTTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  329
J  94.8% (55/58)    IGHJ6*02     5    -.....AC........................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_43312

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           290     2e-80
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	220	25	6	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_2050   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCGGGGAAGGGC  90
V  87.6% (220/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C..A........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_2050   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACTTCC  180
V  87.6% (220/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...........G...  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_2050   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  87.6% (220/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_2050   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_43311

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           336     1e-94
IGHD3-22*01                                                                                           18.0    0.61 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTTGTCCCCGACACCC	TATTATTATGACAGT	GGCGATGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATTTGTCCCCGACACCCTATTATTATGACAGTGGCGATGGCTTTGACTAC	AKDLSPTPYYYDSGDGFDY	242	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	28	27	1	0	96.4
CDR1-IMGT	29	52	24	21	3	0	87.5
FR2-IMGT	53	103	51	48	3	0	94.1
CDR2-IMGT	104	127	24	19	5	0	79.2
FR3-IMGT	128	241	114	109	5	0	95.6
CDR3-IMGT (germline)	242	249	8	8	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        S  L  R  L  S  C  T  A  S  G  F  T  F  R  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E
                    Query_2051   1    GTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTTAGAGACTATGCCATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGA  90
V  93.2% (232/249)  IGHV3-23*01  48   ...................G......................CAG..........AG.................................  137
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E

                                      ------------><-------CDR2-IMGT------><----------------------------------------------------
                                        W  V  S  G  I  S  G  G  G  A  G  T  H  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  R  T  K
                    Query_2051   91   GTGGGTCTCAGGTATAAGTGGTGGTGGTGCTGGAACACACTACACAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAGAACCAA  180
V  93.2% (232/249)  IGHV3-23*01  138  ...........C...T......A......G.A.C...T.....G.......................................ATT....  227
                                        W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K

                                      FR3-IMGT----------------------------------------------------><-----------------------CDR3-
                                        N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  L  S  P  T  P  Y  Y
                    Query_2051   181  GAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATTTGTCCCCGACACCCTATTA  270
V  93.2% (232/249)  IGHV3-23*01  228  .....................................................................---------------------  296
                                        N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                        
D  86.7% (13/15)    IGHD3-22*01  2    -------------------------------------------------------------------------------------.....  6

                                      IMGT----------------------->                                  
                                        Y  D  S  G  D  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  T  
                    Query_2051   271  TTATGACAGTGGCGATGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCACAG  332
D  86.7% (13/15)    IGHD3-22*01  7    C.....T...----------------------------------------------------  16
J  97.7% (43/44)    IGHJ4*02     5    ------------------........................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_43310

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           363     1e-102
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	114	0	0	100
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	242	237	5	0	97.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_2052   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  97.9% (237/242)  IGHV4-59*01  50   .....TCC...A..............................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_2052   94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  97.9% (237/242)  IGHV4-59*01  140  ..........................................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y  
                    Query_2052   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTACT  273
V  97.9% (237/242)  IGHV4-59*01  230  ..........................................................G...----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (20/20)   IGHD5-18*01  1    ---------------------------------------------------------------....................-------  20
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2052   274  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_197652

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           371     7e-105
IGHD6-6*01                                                                                            21.8    0.045 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-6*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCC	ATAGCAGCTCG	GATGGGGA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCATAGCAGCTCGGATGGGGAACTTTGACTCC	RP*QLGWGTLTP	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	77	71	67	3	1	94.4
CDR1-IMGT	78	101	24	18	6	0	75
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	19	5	0	79.2
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	293	3	3	0	0	100
Total	N/A	N/A	287	264	22	1	92


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S   *  R  A  P  A  R  L  L  E  A  P  S  G  G 
                    Query_2053   8    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCCGGGTCCTCG-TGAAGGGCTCCTGCAAGGCTTCTGGAGGCACCGTCCGGAGGT  96
V  92.0% (264/287)  IGHV1-69*01  5    ...................G.................T.........G......T.........................T..A.C..C.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                       I  L  S  A  G  C  D  R  P  L  D  Q  D  L  S  G  W  E  G  S  S  L  F  *  G  Q  Q  T  T  H 
                    Query_2053   97   ATCTTATCAGCTGGGTGCGACAGGCCCCTGGACCAGGACTTGAGTGGATGGGAGGGATCATCCCTCTTTTAAGGACAGCAAACTACGCAC  186
V  92.0% (264/287)  IGHV1-69*01  95   ..GC.............................A...G...........................A.C..TG.T................  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                       R  S  S  R  A  E  S  R  L  P  R  T  N  P  R  A  Q  S  T  W  R  *  T  A  W  D  L  R  T  R 
                    Query_2053   187  AGAAGTTCCAGGGCAGAGTCACGATTACCGCGCACGAATCCACGAGCACAGTCTACATGGAGGTGAACAGCCTGGGATCTCAGGACACGG  276
V  92.0% (264/287)  IGHV1-69*01  185  ................................G..................C..........C...G.......A.....G.........  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-------------CDR3-IMGT------------>                                
                                       P  C  I  T  V  R  P  *  Q  L  G  W  G  T  L  T  P  G  A  R  E  P  W  S  P  S  P  
                    Query_2053   277  CCGTGTATTACTGTGCGGCCATAGCAGCTCGGATGGGGAACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  358
V  92.0% (264/287)  IGHV1-69*01  275  .................-----------------------------------------------------------------  291
                                      A  V  Y  Y  C  A                                                                  
D  100.0% (11/11)   IGHD6-6*01   5    --------------------...........---------------------------------------------------  15
J  97.7% (42/43)    IGHJ4*02     4    ---------------------------------------.........A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_321722

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     8e-121
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGGACAC	TGTAGTAGTGCCATCTGCGATG	GACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTAC	ARHMGHCSSAICDGPDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	281	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  Q  K  P  G  E  A  L  K  I  S  C  K  G  S  G  Y  S  F  G  S  Y
                    Query_2054   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGCAAAAGCCGGGGGAGGCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCAGTTA  90
V  96.6% (281/291)  IGHV5-51*01  6    ............................A.......C......T......................................AC...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_2054   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.6% (281/291)  IGHV5-51*01  96   ........G.................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_2054   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  96.6% (281/291)  IGHV5-51*01  186  .............................C.........C.................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  M  G  H  C  S  S  A  I  C  D  G  P  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_2054   271  CATGTATTACTGTGCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  96.6% (281/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  86.4% (19/22)    IGHD2-2*01   8    -------------------------------.........A...G....T...-------------------------------------  29
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_2054   361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_43319

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           339     2e-95
IGHD2-21*01                                                                                           10.3    124  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTC	GTGAT	CGGTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCGTGATCGGTGACTACTTTGACCAA	ARHVVIGDYFDQ	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	234	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  D  A  S  I  S  S  S  R  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_2055   1    ACCCTGTCCCTCACCTGCACTGTCTCTGATGCCTCCATCAGCAGTAGTAGATACTATTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.2% (234/251)  IGHV4-39*01  49   ............................G..G..................T.....C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  H  I  G  S  T  F  Y  K  Q  S  L  K  T  R  V  T  I  S  I  D  S  S 
                    Query_2055   91   CTGGAGTGGATTGGGAGTATTTATCATATTGGGAGCACCTTCTACAAACAGTCCCTCAAGACTCGAGTCACCATATCCATAGACTCGTCC  180
V  93.2% (234/251)  IGHV4-39*01  139  ....................C...T...G...........A......C.C...........G................G.....A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  H  V  V  I  G  D  Y 
                    Query_2055   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCCATATATTACTGTGCGAGACATGTCGTGATCGGTGACTAC  270
V  93.2% (234/251)  IGHV4-39*01  229  ...................A..............................TG.G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD2-21*01  15   ---------------------------------------------------------------------------.....----------  19
J  95.8% (46/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2055   271  TTTGACCAATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  95.8% (46/48)    IGHJ4*02     6    ......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_200401

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           322     2e-90
IGHD3-10*01                                                                                           10.3    116  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGA	CTTCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGACTTCAGGCCTTTGGCTCC	ARGGLQAFGS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  G  G  F  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_2056   1    ACCCTGTCCCTCACCTGCACTGTCTCCGGTGGCTCCATCAACAGTGGTGGATTCTACTGGACTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  91.2% (228/250)  IGHV4-31*03  49   ..........................T.............G.........T.A........GC...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  Y  T  G  H  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  L  D  T  S 
                    Query_2056   91   CTAGAGTGGATTGGTTACATCTTTTACACTGGACACACCTACTACAATCCGTCCCTCAGGAGTCGACTTACCATATCACTAGACACATCT  180
V  91.2% (228/250)  IGHV4-31*03  139  ..G...........G.......A.....G...GAG............C..........A.......G...........G.......G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       E  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  L  Q  A  F  G 
                    Query_2056   181  GAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGGGGACTTCAGGCCTTTGGC  270
V  91.2% (228/250)  IGHV4-31*03  229  A...................G.....C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------.....---------------  20
J  95.5% (42/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------.....A.  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2056   271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  95.5% (42/44)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_200400

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           341     5e-96
IGHD3-3*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  N  W  V  R  Q  H  P  G  K  G 
                    Query_2057   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAACTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  93.6% (234/250)  IGHV4-31*03  49   ...............................G.............................G....A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S 
                    Query_2057   91   CTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCC  180
V  93.6% (234/250)  IGHV4-31*03  139  ...............T.C...T..T.C.....G......T............................T..........T.........T  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I 
                    Query_2057   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATT  270
V  93.6% (234/250)  IGHV4-31*03  229  ...................................T..............C..G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------------...  11

                                      GT------------------>                                  
                                       F  V  A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_2057   271  TTTGTCGCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  325
D  100.0% (7/7)     IGHD3-3*01   12   ....---------------------------------------------------  15
J  97.7% (42/43)    IGHJ4*02     6    ------------....................................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_200403

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           321     6e-90
IGHD3-22*01                                                                                           12.2    31   
IGHJ3*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TC	ATGATA	AACCTAGATCTTGTC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCATGATAAACCTAGATCTTGTCTTTGATATC	AKVMINLDLVFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  I  F  S  N  F  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2058   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCATCTTTAGCAACTTTGGCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.2% (227/249)  IGHV3-23*01  47   ................................T...C........G..A..C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  S  D  S  G  E  R  T  E  F  A  D  S  V  K  G  R  F  T  M  S  R  D  N  S  
                    Query_2058   91   AGTGGGTCGCGTTTATTAGTGATAGTGGTGAGCGCACAGAGTTCGCGGACTCCGTGAAGGGCCGGTTCACCATGTCCAGAGACAATTCCA  180
V  91.2% (227/249)  IGHV3-23*01  137  ........T.AGC........G........GTA.....T.C.A...A..........................C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      R  N  T  L  Y  L  Q  M  N  R  L  R  V  D  D  T  A  V  Y  Y  C  A  K  V  M  I  N  L  D  L  
                    Query_2058   181  GGAACACGCTGTATCTGCAAATGAACAGGCTGAGAGTCGACGACACGGCCGTATATTACTGTGCGAAAGTCATGATAAACCTAGATCTTG  270
V  91.2% (227/249)  IGHV3-23*01  227  A...........................C.......C...G............................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD3-22*01  9    -----------------------------------------------------------------------......-------------  14

                                      ---------->                                  
                                      V  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_2058   271  TCTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  315
J  97.7% (42/43)    IGHJ3*02     8    --........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_200404

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            385     4e-109
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	248	2	0	99.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2059   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.2% (248/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_2059   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  99.2% (248/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_2059   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  99.2% (248/250)  IGHV3-7*01   227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2059   271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_200406

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           427     1e-121
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTGA	TATGGTTCGCGGAGTT	CTTGAGAGGGAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTGATATGGTTCGCGGAGTTCTTGAGAGGGAGGACTAC	ARLDMVRGVLEREDY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	112	2	0	98.2
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	283	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  
                    Query_2060   2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGCAAGGGTTCTGGGTACAGCTTTTCCA  91
V  96.6% (283/293)  IGHV5-51*03  2    ....G.....G.....................................................T...........A.........A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  
                    Query_2060   92   CCTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACA  181
V  96.6% (283/293)  IGHV5-51*03  92   G...........G........................................................G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  R  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_2060   182  GCCCGTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACC  271
V  96.6% (283/293)  IGHV5-51*03  182  ............A............................................................................A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      P  A  M  Y  Y  C  A  R  L  D  M  V  R  G  V  L  E  R  E  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_2060   272  CCGCCATGTATTACTGTGCGAGACTTGATATGGTTCGCGGAGTTCTTGAGAGGGAGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  361
V  96.6% (283/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  93.8% (15/16)    IGHD3-10*01  8    ----------------------------.........G......----------------------------------------------  23
J  100.0% (40/40)   IGHJ4*02     9    --------------------------------------------------------..................................  42

                                            
                                      S  S  
                    Query_2060   362  CCTCAG  367
J  100.0% (40/40)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_182518

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           400     9e-114
IGHD6-13*01                                                                                           12.2    36    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCACTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTTACTAC	AALIAASHFTYY	292	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	71	3	0	95.9
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	105	9	0	92.1
CDR3-IMGT (germline)	292	294	3	3	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_2061   5    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCA  94
V  94.1% (273/290)  IGHV5-51*01  2    ....G........G........................................................T...................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_2061   95   CCTACTGGATCGGCTGGGTGCGCCAAGTGCCCGGAAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  184
V  94.1% (273/290)  IGHV5-51*01  92   G........................GA.......G.............G.........................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  L  S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  S  P  L  K  A  S  Y  
                    Query_2061   185  GTCTGTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAGCACCGCCTACCTGCAGTGGAGCCCCCTGAAGGCCTCGTACT  274
V  94.1% (273/290)  IGHV5-51*01  182  .C.C....................C...................A..........................AG.............G..A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      S  A  V  Y  Y  C  A  A  L  I  A  A  S  H  F  T  Y  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2061   275  CCGCCGTGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTTACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  361
V  94.1% (273/290)  IGHV5-51*01  272  .....A..............-------------------------------------------------------------------  291
                                      T  A  M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    -------------------------...A.....-----------------------------------------------------  12
J  100.0% (39/39)   IGHJ4*02     10   ------------------------------------------------.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_197658

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           310     1e-86
IGHD1-26*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCTTCTTTT	TAGTGGGACCTACT	GGGAGGGTCCCCG	CTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCTTCTTTTTAGTGGGACCTACTGGGAGGGTCCCCGCTTGGACGAA	AKDLLFSGTYWEGPRLDE	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  K  Y  V  M  I  W  V  R  Q  T  P  G  K  G  L  
                    Query_2062   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTTAATAAATATGTGATGATCTGGGTCCGCCAGACTCCCGGGAAGGGGCTGG  90
V  89.6% (224/250)  IGHV3-23*01  47   .....................................C....GC.GC....CC....G.............G....A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  A  I  G  G  S  G  S  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2062   91   AGTGGCTCTCAGCCATCGGTGGCAGTGGTAGTAGCACGTATTACGCAGATTCTGTGAAGGGCCGGTTCACCATATCCAGAGACAATTCCA  180
V  89.6% (224/250)  IGHV3-23*01  137  .....G.......T..TA....T......G.......A..C........C..C....................C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  I  N  N  L  G  A  E  D  T  A  V  Y  Y  C  A  K  D  L  L  F  S  G  T  
                    Query_2062   181  AGAACACACTGTATCTGCAAATCAACAACCTGGGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAAGACCTTCTTTTTAGTGGGACCT  270
V  89.6% (224/250)  IGHV3-23*01  227  .......G..............G....G....A...................A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD1-26*01  5    -------------------------------------------------------------------------------........G..  15

                                      IMGT--------------------->                                  
                                      Y  W  E  G  P  R  L  D  E  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2062   271  ACTGGGAGGGTCCCCGCTTGGACGAATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  92.9% (13/14)    IGHD1-26*01  16   ...---------------------------------------------------------  18
J  93.2% (41/44)    IGHJ4*02     5    ----------------...T...T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_293078

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD6-13*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGGA	CAACGC	GGGTATAGCAGCACCTGG	AGCGTTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAGGACAACGCGGGTATAGCAGCACCTGGAGCGTTTTTTGACTAC	AEDNAGIAAPGAFFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2063   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGCTTCACGTTCAGCTATTATGGCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-23*01  47   ...............................A.....C..T...AGC....C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  T  I  S  A  S  G  R  S  T  H  Y  A  D  Y  L  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2063   91   AGTGGGTCGCAACTATTAGTGCTAGTGGTCGTAGCACACACTACGCAGACTATCTGAAGGGCCGGTTCACCATCTCCAGGGACAATTCCA  180
V  90.4% (226/250)  IGHV3-23*01  137  ........T..G.........G.......G........T............CCG.........................A..........  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  F  C  A  E  D  N  A  G  I  A  A  
                    Query_2063   181  AGAACACACTGTATCTGCAGATGGACAGCCTGCGAGCCGAAGACACGGCCGTATATTTCTGTGCGGAGGACAACGCGGGTATAGCAGCAC  270
V  90.4% (226/250)  IGHV3-23*01  227  .......G...........A...A........A.......G................A.......A.A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  94.4% (17/18)    IGHD6-13*01  1    ----------------------------------------------------------------------------.............G  14

                                      T------------------>                                
                                      P  G  A  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2063   271  CTGGAGCGTTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  322
D  94.4% (17/18)    IGHD6-13*01  15   ....------------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     6    -----------.........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_273463

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           318     6e-89
IGHD2-8*01                                                                                            10.3    121  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-8*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTCG	AATGG	CTTACAGAGAAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCTCGAATGGCTTACAGAGAAATGATGCTTTTGATTTC	ARGSNGLQRNDAFDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  V  S  G  F  S  F  S  S  Y  N  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_2064   1    GGTCCCTGAGACTCTCCTGTGAGGTCTCTGGATTCAGCTTCAGTAGCTATAACATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-21*01  47   .....................CA.C...........C..............G....A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  D  P  T  G  T  Y  I  Y  Y  A  D  S  V  K  G  R  H  T  I  S  R  D  N  A  
                    Query_2064   91   AGTGGGTCTCCTCCATTGATCCTACTGGTACTTACATATACTACGCAGACTCAGTGAAGGGCCGACACACCATCTCCAGAGACAACGCCA  180
V  90.8% (226/249)  IGHV3-21*01  137  ..........A......AG.AG..G.A...G..................................TT.......................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  G  S  N  G  L  Q  R  
                    Query_2064   181  AGAACTCGCTGTTTCTACAAATGAACAGCCTGAGAGCCGAAGACACGGCTATATATTACTGTGCGCGAGGCTCGAATGGCTTACAGAGAA  270
V  90.8% (226/249)  IGHV3-21*01  227  .......A....A...G.......................G.........G.G............A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-8*01   14   --------------------------------------------------------------------------.....-----------  18

                                      ---------------->                                  
                                      N  D  A  F  D  F  W  G  Q  G  T  M  V  A  V  S  S  
                    Query_2064   271  ATGATGCTTTTGATTTCTGGGGCCAAGGGACAATGGTCGCCGTCTCTTCAG  321
J  96.0% (48/50)    IGHJ3*01     1    -.............G.......................A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_293071

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           380     1e-107
IGHD1-1*01                                                                                            14.1    9.4   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAGGGGG	CAACTGG	GACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTAC	ARGGGNWDPFDY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	69	2	0	97.2
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	46	5	0	90.2
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	104	10	0	91.2
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  P  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  
                    Query_2065   5    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGCCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCT  94
V  92.0% (266/289)  IGHV5-51*01  5    ............................................T.....................G............C......AG..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  V  V  Y  P  D  D  S  D  A  R  Y  S  
                    Query_2065   95   ACTGGATCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGGTCGTCTATCCTGATGACTCTGATGCCAGATACAGCC  184
V  92.0% (266/289)  IGHV5-51*01  95   ...................C..G.........A..........G.........A..A.........G..........A............  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  E  G  P  I  T  I  S  G  D  K  S  I  S  T  A  F  L  Q  W  N  S  L  K  A  S  D  P  
                    Query_2065   185  CGTCCTTCGAAGGCCCCATCACCATCTCAGGCGATAAGTCCATCAGCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACCCCG  274
V  92.0% (266/289)  IGHV5-51*01  185  ........C......AGG............C...C...................A...........G...................A...  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-------------CDR3-IMGT------------>                                  
                                      A  I  Y  Y  C  A  R  G  G  G  N  W  D  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2065   275  CCATCTATTACTGTGCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  92.0% (266/289)  IGHV5-51*01  275  ....G..............-----------------------------------------------------------------  293
                                      A  M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    ----------------------------.......-------------------------------------------------  11
J  100.0% (44/44)   IGHJ4*02     5    ----------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_293073

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           357     1e-100
IGHD3-9*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGGCCTAC	TACGTTATTTTGACTGGTTATTA	ACAGGTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGCCTACTACGTTATTTTGACTGGTTATTAACAGGTTATGACTTC	ARGGLLRYFDWLLTGYDF	261	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	19	5	0	79.2
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	18	3	0	85.7
FR3-IMGT	147	260	114	107	7	0	93.9
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	248	20	0	92.5


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  T  F  T  G  Y  F  W  T  W  I  R  
                    Query_2066   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACTTGCGCTGTCTATGGTGGGACCTTTACTGGTTATTTCTGGACCTGGATCCGCC  90
V  92.5% (248/268)  IGHV4-34*01  26   ........T.......T....................C..................T....C.G......C.A.....G...........  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  S  H  S  G  S  T  N  Y  S  P  S  L  K  S  R  V  T  
                    Query_2066   91   AGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGGAAATCAGTCATAGTGGATCCACCAACTACAGCCCGTCCCTCAAGAGTCGAGTCACCC  180
V  92.5% (248/268)  IGHV4-34*01  116  ................G......................A..........AG...........A.........................A  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      L  S  V  D  T  S  K  N  Q  I  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  G  
                    Query_2066   181  TGTCAGTAGACACGTCCAAGAACCAAATCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCTTTGTATTACTGTGCGAGAGGCG  270
V  92.5% (248/268)  IGHV4-34*01  206  .A.......................GT...............G.........................G...................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  

                                      -------------CDR3-IMGT--------------------->                                  
                                      G  L  L  R  Y  F  D  W  L  L  T  G  Y  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_2066   271  GCCTACTACGTTATTTTGACTGGTTATTAACAGGTTATGACTTCTGGGGCCAGGGAACTCTGGTCGCCGTCTCCTCAG  348
D  95.7% (22/23)    IGHD3-9*01   5    ------....A..................-------------------------------------------------  27
J  92.7% (38/41)    IGHJ4*02     8    -------------------------------------.....A...............C......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_293074

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            346     2e-97
IGHD5-12*01                                                                                           12.2    31   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GAGCGGG	GTGGCT	CCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGAGCGGGGTGGCTCCCTGACTAC	VGGAGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2067   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGTGACTACTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-7*01   47   ....................................C.......AG...T.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  K  K  D  G  S  E  K  K  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2067   91   AGTGGGTGGCCATCATAAAGAAAGATGGAAGTGAGAAAAAGTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-7*01   137  ............A.......C.................T.C.................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  V  G  G  A  G  W  L  P  D  
                    Query_2067   181  AGAACTCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGTGGGAGGAGCGGGGTGGCTCCCTGACT  270
V  94.4% (235/249)  IGHV3-7*01   227  ...................A...A............C..........................C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD5-12*01  10   ----------------------------------------------------------------------------......--------  15
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2067   271  ACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   .........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_229048

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           346     2e-97
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACATG	ATTACCATGAT	TCCA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAACATGATTACCATGATTCCAGATGCTTTTGATATC	ARDNMITMIPDAFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  S  S  I  N  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  A 
                    Query_2068   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTAGCTCCATCAACAGTGGAGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGCC  90
V  94.0% (236/251)  IGHV4-31*03  49   ..................A...........G.........G......T........................................G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  D  S  G  G  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_2068   91   CTGGAGTGGATTGGATACATCTATGACAGTGGGGGCACCTCCTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCACTAGACACGTCT  180
V  94.0% (236/251)  IGHV4-31*03  139  ..............G.........T........A......A...........................T.........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  D  N  M  I  T  M  I 
                    Query_2068   181  AGGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACTGTCGCGGACACGGCCGTATATTACTGTGCGAGAGATAACATGATTACCATGATT  270
V  94.0% (236/251)  IGHV4-31*03  229  .A...................C...............C...............G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD3-22*01  3    ------------------------------------------------------------------------------.....T.....-  13

                                      ----------------->                                  
                                       P  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2068   271  CCAGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  100.0% (49/49)   IGHJ3*02     2    ---.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_293077

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           419     2e-119
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	282	14	0	95.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T 
                    Query_2069   1    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACC  90
V  95.3% (282/296)  IGHV5-51*01  1    .....G........G...................A...................................G...................  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y 
                    Query_2069   91   AACTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATAC  180
V  95.3% (282/296)  IGHV5-51*01  91   .G...........G...........................C....................C...................C.......  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D 
                    Query_2069   181  AGCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGAC  270
V  95.3% (282/296)  IGHV5-51*01  181  ............C.....................................C...........G......A....................  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T 
                    Query_2069   271  ACCGCCATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACC  360
V  95.3% (282/296)  IGHV5-51*01  271  ........G.................----------------------------------------------------------------  296
                                       T  A  M  Y  Y  C  A  R                                                                   
D  92.9% (13/14)    IGHD1-26*01  4    ----------------------------------..........C...------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ---------------------------------------------------.......A...............................  44

                                                        
                                       T  V  T  V  S  S 
                    Query_2069   361  ACGGTCACCGTCTCCTCA  378
J  98.2% (56/57)    IGHJ6*02     45   ..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_36348

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           352     3e-99
IGHD1-26*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GAG	GTGGGAG	T	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGAGGTGGGAGTTACTACTACGCCCTGGACGTC	ARGGGSYYYALDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  H  W  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_2070   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAGTCATTGGATGCACTGGGTCCGCCAAGCTCCAGGGAGGGGGCTGG  90
V  95.2% (237/249)  IGHV3-74*01  47   ...........................................T..CT.C...............................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  H  T  D  G  S  S  T  S  Y  V  D  S  V  K  G  R  F  T  V  S  R  D  N  G  
                    Query_2070   91   TGTGGGTCTCACGTATTCACACTGATGGGAGTAGCACAAGCTATGTGGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGGCA  180
V  95.2% (237/249)  IGHV3-74*01  137  .................A.T.G.....................C.C.........................A...............C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  G  S  Y  Y  Y  
                    Query_2070   181  AGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGGAGGTGGGAGTTACTACTACG  270
V  95.2% (237/249)  IGHV3-74*01  227  .....................................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  7    ------------------------------------------------------------------------.......-----------  13
J  94.4% (51/54)    IGHJ6*02     9    --------------------------------------------------------------------------------..........  18

                                      ---------->                                 
                                      A  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2070   271  CCCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  94.4% (51/54)    IGHJ6*02     19   GTA.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_36344

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           321     7e-90
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTGCCTTCGGTCCGA	ATAGCAGT	TGACAGGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGCCTTCGGTCCGAATAGCAGTTGACAGGGGCTACTCCGGCATGGACGTC	ARLPSVRIAVDRGYSGMDV	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  L  N  S  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2071   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGACTCCTTGAATAGTTACTTCTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.2% (224/243)  IGHV4-59*01  49   .............................T.G....A.C.G........A.....G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  D  S  E  T  T  K  Y  N  P  S  L  R  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_2071   91   TGGATTGGCTATATCTATGACAGTGAGACCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  92.2% (224/243)  IGHV4-59*01  139  ........G.........T......G..G......C................A....................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  T  V  T  S  V  T  P  A  D  T  A  V  Y  F  C  A  R  L  P  S  V  R  I  A  V  D 
                    Query_2071   181  CAGTTCTCCCTGACGGTGACCTCTGTGACCCCTGCGGACACGGCCGTGTATTTCTGTGCGAGATTGCCTTCGGTCCGAATAGCAGTTGAC  270
V  92.2% (224/243)  IGHV4-59*01  229  .............A.C...G..........G.....................A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  5    ------------------------------------------------------------------------------........----  12

                                      ----------------------->                                 
                                       R  G  Y  S  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2071   271  AGGGGCTACTCCGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  327
J  96.2% (50/52)    IGHJ6*02     11   -----.....A...T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_36345

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           313     1e-87
IGHD2-21*01                                                                                           10.3    123  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTTATCCTT	CATAT	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTTATCCTTCATATAACTACGGTATGGACGCC	ARSYPSYNYGMDA	255	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	254	129	106	8	15	82.2
CDR3-IMGT (germline)	255	260	6	6	0	0	100
Total	N/A	N/A	260	232	13	15	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2072   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAATTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.2% (232/260)  IGHV3-53*01  47   .................................................C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><------------------------------------------------------
                                      E  W  V  S  L  I  Y  S  G  P  S  T  Y  D  A  E  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  
                    Query_2072   91   AGTGGGTCTCACTTATTTATAGCGGCCCTAGCACATACGACGCAGAGACACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCA  180
V  89.2% (232/260)  IGHV3-53*01  137  ...........G.............TGG........---------------.............C.........................  211
                                      E  W  V  S  V  I  Y  S  G  G  S  T                 Y  Y  A  D  S  V  K  G  R  F  T  I  S  

                                      -----FR3-IMGT------------------------------------------------------------><--------------C
                                      R  D  N  R  K  N  T  L  Y  L  Q  L  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  Y  P  
                    Query_2072   181  GGGACAATCGCAAGAACACACTGTATCTTCAATTGCACAGTCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGATCTTATCCTT  270
V  89.2% (232/260)  IGHV3-53*01  212  .A......TC.........G............A..A....C.......................................----------  291
                                      R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R           

                                      DR3-IMGT-------------->                                 
                                      S  Y  N  Y  G  M  D  A  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2072   271  CATATAACTACGGTATGGACGCCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
D  100.0% (5/5)     IGHD2-21*01  3    .....---------------------------------------------------  7
J  98.0% (49/50)    IGHJ6*02     13   ------...............T..................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_36346

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           413     2e-117
IGHD1-26*01                                                                                           10.3    131   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_2073   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  95.5% (277/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  Y  A  Q 
                    Query_2073   92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTATGCACAG  181
V  95.5% (277/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_2073   182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.5% (277/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_2073   272  ATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  95.5% (277/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_36341

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     5e-89
IGHD6-19*01                                                                                           18.0    0.54 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAGGGAGT	AGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCC	ARAGSSGWLDS	232	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	21	20	20	0	0	100
CDR1-IMGT	22	45	24	20	4	0	83.3
FR2-IMGT	46	96	51	48	3	0	94.1
CDR2-IMGT	97	117	21	21	0	0	100
FR3-IMGT	118	231	114	105	9	0	92.1
CDR3-IMGT (germline)	232	238	7	6	1	0	85.7
Total	N/A	N/A	237	220	17	0	92.8


Alignments

                                      <-----FR1-IMGT-----><-------CDR1-IMGT------><--------------------FR2-IMGT-----------------
                                         L  T  C  T  V  S  G  G  S  I  T  S  D  Y  W  S  W  I  R  K  P  P  G  K  G  L  E  W  I  
                    Query_2074   2    CCCTCACCTGCACTGTCTCTGGGGGCTCCATAACTAGTGACTACTGGAGCTGGATCCGGAAGCCCCCTGGGAAGGGACTGGAGTGGATTG  91
V  92.8% (220/237)  IGHV4-59*01  56   ......................T........C.G....T....................C.......A......................  145
                                         L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  

                                      ----><-----CDR2-IMGT-----><----------------------------------------------------FR3-IMGT---
                                      G  Y  I  Y  Y  S  G  S  T  D  Y  N  S  S  L  K  S  R  V  T  I  S  F  D  R  S  K  N  Q  F  
                    Query_2074   92   GATATATCTATTACAGTGGGAGCACCGACTACAATTCCTCCCTCAAGAGTCGAGTCACCATATCATTTGACAGGTCCAAGAACCAGTTCT  181
V  92.8% (220/237)  IGHV4-59*01  146  .G........................A.......CC.............................G.A....C.................  235
                                      G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  

                                      -------------------------------------------------><-----------CDR3-IMGT----------->       
                                      S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  S  S  G  W  L  D  S  W  G  
                    Query_2074   182  CCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCCTGGGGCC  271
V  92.8% (220/237)  IGHV4-59*01  236  ........C....C..........................G............A...---------------------------------  292
                                      S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                                   
D  100.0% (9/9)     IGHD6-19*01  10   -----------------------------------------------------------------.........----------------  18
J  95.0% (38/40)    IGHJ4*02     7    ---------------------------------------------------------------------------......A........  21

                                                               
                                      R  G  T  L  V  T  V  S  S
                    Query_2074   272  GGGGAACCCTGGTCACCGTCTCCTC  296
J  95.0% (38/40)    IGHJ4*02     22   A........................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_36342

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD2-2*01                                                                                            21.8    0.046 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAGTAGTGAA	TACCAGCTGCT	GTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCC	ARSSSEYQLLFWFDP	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	280	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_2075   2    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCA  91
V  95.6% (280/293)  IGHV5-51*03  2    ....G........G.......................................................G............C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  
                    Query_2075   92   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATATATCCTGGTGACTCTGATGCCAGATATA  181
V  95.6% (280/293)  IGHV5-51*03  92   .............................................................C..................A.......C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  K  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  R  S  S  L  K  A  S  D  
                    Query_2075   182  GTCCGTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGCGGAGCAGCCTCAAGGCCTCGGACA  271
V  95.6% (280/293)  IGHV5-51*03  182  .C.........C.....................C...............................T..........G.............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  Y  C  A  R  S  S  S  E  Y  Q  L  L  F  W  F  D  P  W  G  Q  G  T  L  V  T  V  
                    Query_2075   272  CCGCCATGTATTATTGTGCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCA  361
V  95.6% (280/293)  IGHV5-51*03  272  .............C.........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (11/11)   IGHD2-2*01   16   -----------------------------------...........--------------------------------------------  26
J  97.9% (46/47)    IGHJ5*02     5    -------------------------------------------------........................................T  45

                                            
                                      T  S  
                    Query_2075   362  CCTCAG  367
J  97.9% (46/47)    IGHJ5*02     46   ......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_36343

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           308     4e-86
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTGGAGG	AGTGGCTGGT	CGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTGGAGGAGTGGCTGGTCGGTTTGACTTC	AREGGGVAGRFDF	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	224	27	0	89.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  R  G  S  V  S  S  G  G  Y  H  W  S  W  I  R  Q  T  P  G  R  G 
                    Query_2076   1    ACCCTGTCCCTCACCTGCTCTGTCTCTCGTGGCTCCGTCAGCAGTGGGGGTTATCACTGGTCCTGGATCCGGCAGACCCCAGGCAGGGGA  90
V  89.2% (224/251)  IGHV4-61*08  49   ..................A........G...................T.....CT.....AG.............C.......G.A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  F  T  G  T  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  A  D  M  S 
                    Query_2076   91   CTGGAGTGGATTGGCTATATCCACTTCACTGGGACCACCAAGTACAACCCCTCCCTTAAGAGTCGAGTCAGCATATCAGCAGACATGTCC  180
V  89.2% (224/251)  IGHV4-61*08  139  ..............G......T.T.A..G.....G......C..............C.............C........T.....C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  G  V  A  G 
                    Query_2076   181  AAGAACCAATTCTCCCTGAACCTGAGGTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTGCGAGAGAGGGTGGAGGAGTGGCTGGT  270
V  89.2% (224/251)  IGHV4-61*08  229  ........G...........G.....C..........................G..T..C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (10/10)   IGHD6-19*01  10   --------------------------------------------------------------------------------..........  19

                                      ----------->                                  
                                       R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2076   271  CGGTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02     6    ---.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_316078

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_2077   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_2077   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_2077   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                              
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S 
                    Query_2077   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCC  333
D  91.7% (11/12)    IGHD6-19*01  16   ...------------------------------------------------------------  18
J  91.1% (41/45)    IGHJ6*02     15   ------------------.....T.......T................A.....A........  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_316079

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           302     3e-84
IGHD2-15*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GTCGGGAAGAAC	AGTGGTG	TCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTCGGGAAGAACAGTGGTGTCTTTTGACTTA	AKSGRTVVSFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	220	27	0	89.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  T  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2078   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCAACTTTAGCACGTATGCCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.1% (220/247)  IGHV3-23*01  47   ......................A.............C........GC..........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  N  S  T  K  Y  A  D  S  V  K  G  R  I  T  I  S  R  D  N  S  
                    Query_2078   91   AGTGGGTCTCAGCCATCAGTGGCAGTGGTAATAGCACAAAATATGCAGACTCCGTTAAGGGCCGGATCACCATCTCCAGAGACAATTCCA  180
V  89.1% (220/247)  IGHV3-23*01  137  .............T..T.....T......GG.......T.C..C...........G.........T........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  R  M  I  Y  L  Q  M  N  S  M  R  A  E  D  T  A  V  Y  L  C  A  K  S  G  R  T  V  V  S  
                    Query_2078   181  AGAGAATGATATATCTTCAAATGAACAGTATGAGAGCCGAGGACACGGCCGTATATCTTTGTGCGAAGTCGGGAAGAACAGTGGTGTCTT  270
V  89.1% (220/247)  IGHV3-23*01  227  ...AC.C.C.G.....G...........CC..........................TAC........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-15*01  11   -------------------------------------------------------------------------------.......----  17
J  90.7% (39/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                  
                                      F  D  L  W  G  Q  G  I  Q  V  T  V  S  S  
                    Query_2078   271  TTGACTTATGGGGCCAGGGAATCCAGGTCACCGTCTCCTCAG  312
J  90.7% (39/43)    IGHJ4*02     7    ......AC.............C..T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_321721

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD2-2*01                                                                                            27.6    8e-04
IGHJ5*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGCGGCGGG	TTGTTGTAGTGCCGGCTGCTATG	GAATT	AACCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGCGGCGGGTTGTTGTAGTGCCGGCTGCTATGGAATTAACCGGTTCGGCCCC	ARDAAGCCSAGCYGINRFGP	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_2079   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGCGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .............................................T...................................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  D  H  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2079   91   TGGATTGGGTATATCCATTACAGTGGGAGCACCGACCACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTTGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ...............T.................A..T...............................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  I  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  A  A  G  C  C  S  A  G 
                    Query_2079   181  CAGATCTCCCTGAAGGTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGACGCGGCGGGTTGTTGTAGTGCCGGC  270
V  95.1% (233/245)  IGHV4-59*01  229  ...T...........C...G...........................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.0% (20/23)    IGHD2-2*01   7    --------------------------------------------------------------------------....A.....A..A..  22

                                      GT------------------------>                                  
                                       C  Y  G  I  N  R  F  G  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_2079   271  TGCTATGGAATTAACCGGTTCGGCCCCTGGGGCCAAGGGACCCCGGTCACCGTCTCCTCAG  331
D  87.0% (20/23)    IGHD2-2*01   23   .......------------------------------------------------------  29
J  89.8% (44/49)    IGHJ5*01     3    ------------...T......A.T.............A....T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_146713

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTATCGTTCGGGGACTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATCGTTCGGGGACTTATTTTGACTAC	ARGLYYYRSGTYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_2080   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ...................................................T.........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  T  R  I  T  I  S  V  D  T  S 
                    Query_2080   91   CTGGAGTGGATTGGGCACATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGACTCGAATTACCATATCAGTAGACACCTCC  180
V  96.0% (240/250)  IGHV4-31*03  139  ...............T..........C..................................G....G...................G..T  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  R  S 
                    Query_2080   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCTATTACTATCGTTCG  270
V  96.0% (240/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (22/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------.........G.....  16

                                      ----------------->                                  
                                       G  T  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2080   271  GGGACTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  91.7% (22/24)    IGHD3-10*01  17   ....G....-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    ---------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_316070

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         291     5e-81
IGHD2-8*01                                                                                            21.8    0.041
IGHJ5*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-8*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCC	TCTCGTCGGG	GGATATTGTAC	CCAAGTGAATGGCAGCCGCC	CGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCTCTCGTCGGGGGATATTGTACCCAAGTGAATGGCAGCCGCCCGACTCC	ASRRGILYPSEWQPPDS	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	30	25	2	3	83.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	97	17	0	85.1
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	246	218	25	3	88.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G     S  S  W  S  W  T  R  Q  P  P  G  K  G 
                    Query_2081     1    ACCCTGTCCCTCACCTGCACTGTCTCAGGTGGCTCCATCAGCAGTGGG---TCCTCCTGGAGCTGGACCCGGCAGCCACCAGGGAAGGGC  87
V  88.6% (218/246)  IGHV4-30-2*01  49   ..................G.......T....................TGGT.A..............T......................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  D  S  G  T  T  F  Y  N  P  S  L  M  S  R  V  T  I  L  I  D  K  S 
                    Query_2081     88   CTGGAGTGGATTGGGTACATCTATGATAGTGGAACCACCTTCTACAACCCGTCCCTCATGAGTCGCGTCACCATATTAATTGACAAGTCC  177
V  88.6% (218/246)  IGHV4-30-2*01  139  ........................C.......G.G.....A.................A......A..........C.G.A....G....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         R  N  Q  F  S  L  M  L  T  S  V  T  A  A  D  T  A  F  Y  F  C  A  S  R  R  G  I  L  Y  P 
                    Query_2081     178  AGGAACCAATTCTCCCTGATGTTGACCTCTGTGACCGCCGCGGACACGGCCTTTTACTTTTGTGCCTCTCGTCGGGGGATATTGTACCCA  267
V  88.6% (218/246)  IGHV4-30-2*01  229  .A......G..........A.C...G.........................G.G..T.AC......------------------------  294
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (11/11)   IGHD2-8*01     2    ----------------------------------------------------------------------------...........---  12

                                        MGT-------------------->                                
                                         S  E  W  Q  P  P  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2081     268  AGTGAATGGCAGCCGCCCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  323
J  97.4% (38/39)    IGHJ5*01       11   -----------------...............A.......................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_316071

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ5*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGG	TGACTCCGGTGAGTAC	GTCCGTCACTTT	GACCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGTGACTCCGGTGAGTACGTCCGTCACTTTGACCCC	AKDGDSGEYVRHFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  T  M  T  W  V  R  Q  I  P  G  K  G  L  
                    Query_2082   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTACCTTTAGCAGCTATACGATGACCTGGGTCCGCCAAATTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ..................................C...............G.C....G............GGC.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  G  R  T  S  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2082   91   AGTGGGTCTCATCTATTAGTGGTAGTGGTGGTAGAACATCCTACGTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  ...........G......................C....A.....C............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  H  C  A  K  D  G  D  S  G  E  Y  
                    Query_2082   181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTTTATCACTGTGCGAAAGATGGTGACTCCGGTGAGTACG  270
V  94.0% (235/250)  IGHV3-23*01  227  ..............C.....................C...............A...T.............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  87.5% (14/16)    IGHD4-17*01  1    -------------------------------------------------------------------------.....A......C...-  16

                                      ---------------->                                  
                                      V  R  H  F  D  P  C  G  Q  G  D  L  V  T  V  S  S  
                    Query_2082   271  TCCGTCACTTTGACCCCTGCGGCCAGGGAGACCTGGTCACCGTCTCCTCAG  321
J  92.5% (37/40)    IGHJ5*02     12   -----------........G.........AC....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_316072

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           408     4e-116
IGHD4-17*01                                                                                           16.1    2.4   
IGHJ3*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAATGG	TGACTTCGGTG	TTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAATGGTGACTTCGGTGTTCTTGATATT	ARDNGDFGVLDI	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T  T  H
                    Query_2083   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACAGTTTCACCACCCA  90
V  94.8% (276/291)  IGHV1-46*01  6    ..................G..........................................................CC.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        H  M  H  W  V  R  Q  V  P  G  L  G  L  E  W  M  G  I  I  N  P  S  G  G  R  T  S  Y  A  Q
                    Query_2083   91   CCATATGCACTGGGTGCGACAGGTCCCTGGACTAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGGACAAGTTATGCACA  180
V  94.8% (276/291)  IGHV1-46*01  96   .T.....................C........A..........................................C.....C..C.....  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  R  S  T  S  T  V  Y  M  E  M  N  S  L  R  S  E  D  T  A
                    Query_2083   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACAGGTCCACGAGTACAGTCTACATGGAGATGAACAGCCTGAGATCTGAGGACACGGC  270
V  94.8% (276/291)  IGHV1-46*01  186  ...................................C.........C...............C...G........................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  R  D  N  G  D  F  G  V  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2083   271  CGTGTATTACTGTGCGAGAGATAATGGTGACTTCGGTGTTCTTGATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  353
V  94.8% (276/291)  IGHV1-46*01  276  .....................--------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                 
D  90.9% (10/11)    IGHD4-17*01  1    ---------------------------.....A.....---------------------------------------------  11
J  97.6% (41/42)    IGHJ3*02     9    -----------------------------------------.......C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_316073

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           420     7e-120
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	GGG	GGTCTAGTGGAAGGTACT	CCCTCCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGTCTAGTGGAAGGTACTCCCTCCTTCTTTGACTAC	ARGGLVEGTPSFFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_2084   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCAACCTA  90
V  96.5% (279/289)  IGHV5-51*03  6    ..................................................A...............................A.C.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  F  G  W  V  R  Q  I  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_2084   91   CTGGTTCGGCTGGGTGCGCCAGATACCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.5% (279/289)  IGHV5-51*03  96   ....A...................G..........................G......................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2084   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.5% (279/289)  IGHV5-51*03  186  ............................................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  A  R  G  G  L  V  E  G  T  P  S  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2084   271  CATTTATTACTGTGCGCGAGGGGGTCTAGTGGAAGGTACTCCCTCCTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCGTC  360
V  96.5% (279/289)  IGHV5-51*03  276  ...G............A..-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  83.3% (15/18)    IGHD1-26*01  1    ----------------------...A......G..C....--------------------------------------------------  18
J  97.7% (43/44)    IGHJ4*02     5    ------------------------------------------------.......................................C..  46

                                        
                                        
                    Query_2084   361  AG  362
J  97.7% (43/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_316074

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           319     2e-89
IGHD2-15*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCAGGGACAG	TGTATTGGTGGTAGGTGCTAC	CCTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGAGCAGGGACAGTGTATTGGTGGTAGGTGCTACCCTGCCTACTTTGACTAC	AREQGQCIGGRCYPAYFDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  T  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2085   1    GGTCCCTGAGACTCTCCTGTGTCGCGTCTGGGTTCACCTTCAGTACCTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-33*01  47   .....................CA........A.............G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  S  D  G  G  N  K  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_2085   91   AGTGGGTGGCGCTTATTTGGTCTGATGGAGGTAACAAATATTACTCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCA  180
V  90.8% (227/250)  IGHV3-33*01  137  ..........AG....A....A.......A....T.....C..TG.......................................A.....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  S  L  Q  L  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  Q  G  Q  C  I  G  
                    Query_2085   181  AGAATACGCTGTCTCTCCAATTGAACAGCCTGCGAGCCGACGACACGGCTGTTTATTACTGTGCGCGAGAGCAGGGACAGTGTATTGGTG  270
V  90.8% (227/250)  IGHV3-33*01  227  ....C.......A...G...A...........A.......G...........G............A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD2-15*01  8    --------------------------------------------------------------------------------....G.....  17

                                      -IMGT----------------------->                                  
                                      G  R  C  Y  P  A  Y  F  D  Y  W  G  K  G  T  L  V  S  V  S  S  
                    Query_2085   271  GTAGGTGCTACCCTGCCTACTTTGACTACTGGGGCAAGGGAACCCTGGTCTCCGTCTCCTCAG  333
D  90.5% (19/21)    IGHD2-15*01  18   ....C......----------------------------------------------------  28
J  95.7% (45/47)    IGHJ4*02     2    ----------------...................C..............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_316075

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q 
                    Query_2086   1    ACCCTGTCCCTCACCTGCACAGTCTCTGGTGGCTCCATCAGCAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAA  90
V  90.6% (222/245)  IGHV4-59*01  49   ....................T....................T.....C........C............C.................G.G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_2086   91   TGGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  ...A....G.....C...T....T....G......C..............C...........C.C.........A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E 
                    Query_2086   181  CAGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAG  270
V  90.6% (222/245)  IGHV4-59*01  229  ...T.........AG..G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  1    -----------------------------------------------------------------------------............-  12

                                      -------------->                                  
                                       D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_2086   271  GATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  319
J  92.5% (37/40)    IGHJ4*02     9    ---------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_316076

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD5-12*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACGCGGGA	TGGCTAC	AATACCTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACGCGGGATGGCTACAATACCTATTGACTGC	ARGRGMATIPIDC	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  T  Y  Y  W  T  W  I  R  R  P  P  G  K  G  L  E 
                    Query_2087   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCGGTACTTACTACTGGACCTGGATCCGGCGGCCCCCAGGGAAGGGACTGGAA  90
V  93.0% (227/244)  IGHV4-59*01  49   .............................T.........A...G...........G...........A.....................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  T  H  Y  S  G  D  T  N  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  T  S  K  N 
                    Query_2087   91   TGGATTGGCTATACTCATTACAGTGGGGACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCATCATATCAGTAGACACGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*01  139  ........G....TCT...........AG...................................C.........................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       L  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  G  M  A  T  I  P  I 
                    Query_2087   181  CTGCTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGGACGCGGGATGGCTACAATACCTATT  270
V  93.0% (227/244)  IGHV4-59*01  229  .A.T.........A.......................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-12*01  11   -------------------------------------------------------------------------.......----------  17
J  97.6% (40/41)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                 
                                       D  C  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_2087   271  GACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  309
J  97.6% (40/41)    IGHJ4*02     9    ....A..................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_316077

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           321     6e-90
IGHD3-3*01                                                                                            12.2    31   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAGTGG	CAAGTAGGG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGAGTGGCAAGTAGGGGGTTCGACCCC	VRGVASRGFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  F  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2088   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCAGCTACTTTATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGACTCG  90
V  91.2% (227/249)  IGHV3-74*01  47   ...........................................T.......GG................................G..G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  A  R  I  R  S  D  G  T  T  T  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  V  
                    Query_2088   91   TGTGGGTCGCACGTATTCGGAGTGATGGGACTACCACAGCCTACGCGGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAACGTCA  180
V  91.2% (227/249)  IGHV3-74*01  137  ........T........AAT..........G..G....AG........................A......................C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  S  T  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  V  R  G  V  A  S  R  G  F  
                    Query_2088   181  AGAGCACACTGTATCTGGAAATGAACAGTCTGAGAGTCGAGGACACGGCTGTGTATTATTGTGTGAGAGGAGTGGCAAGTAGGGGGTTCG  270
V  91.2% (227/249)  IGHV3-74*01  227  ...A...G.........C..................C.....................C....CA....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-3*01   16   ---------------------------------------------------------------------......---------------  21
J  97.8% (44/45)    IGHJ5*02     7    ------------------------------------------------------------------------------------......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_2088   271  ACCCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  309
J  97.8% (44/45)    IGHJ5*02     13   ..........................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_146711

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD3-16*01                                                                                           10.3    115   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGAAAGA	GGGGG	CTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC	ARDQKEGAPDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	240	5	0	98


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2089   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.0% (240/245)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2089   91   TGGATTGGGTATATCTTTTACAGTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.0% (240/245)  IGHV4-59*01  139  ................A............C............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  K  E  G  A  P  D  Y 
                    Query_2089   181  CAATTCTCCCTGAAACTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC  270
V  98.0% (240/245)  IGHV4-59*01  229  ..G...........G..................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   --------------------------------------------------------------------------.....-----------  22
J  100.0% (41/41)   IGHJ4*02     8    -----------------------------------------------------------------------------------.......  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2089   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (41/41)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_74327

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           311     4e-87
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ2*01                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTTGGGCAGTATCCTT	TGGTTCGGGGAGTT	GGGTTCTC	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACTTGGGCAGTATCCTTTGGTTCGGGGAGTTGGGTTCTCGGTACTTCGATCTC	AKDLGSILWFGELGSRYFDL	239	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	46	5	0	90.2
CDR2-IMGT	101	124	24	20	4	0	83.3
FR3-IMGT	125	238	114	108	6	0	94.7
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	233	216	17	0	92.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  N  N  Y  A  M  D  W  V  R  Q  P  P  G  *  G  L  E  W  V  S  A  I 
                    Query_2090   14   TGTGCAGCCTCTGGATTCACCTTTAACAACTATGCCATGGACTGGGTCCGCCAGCCTCCAGGGTAGGGGCTGGAGTGGGTCTCAGCAATT  103
V  92.7% (216/233)  IGHV3-23*01  64   .........................G..G..........AG.............G........A......................T...  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  R  G  D  N  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  S  T  L  Y  L 
                    Query_2090   104  AGCGGTCGTGGTGATAACACATTTTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAGTACGCTGTATCTG  193
V  92.7% (216/233)  IGHV3-23*01  154  ..T...A......G..G.....AC....................................................AC............  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-------------------------CDR3-IMGT----------
                                       Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  L  G  S  I  L  W  F  G  E  L  G  S 
                    Query_2090   194  CAAATGGACAGCCTGAGAGCCGAAGACACGGCCGTATATTACTGTGCGAAAGACTTGGGCAGTATCCTTTGGTTCGGGGAGTTGGGTTCT  283
V  92.7% (216/233)  IGHV3-23*01  244  ......A................G.............................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (14/14)   IGHD3-10*01  10   ---------------------------------------------------------------------..............-------  23

                                      -------------->                                  
                                       R  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2090   284  CGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  332
J  100.0% (48/48)   IGHJ2*01     6    -................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_146717

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           343     2e-96
IGHD3-22*01                                                                                           18.0    0.60 
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCTAC	GCGTCGGCTACCG	TGATAGTCGTGG	GGAA	GATGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGCTACGCGTCGGCTACCGTGATAGTCGTGGGGAAGATGTTTTTGATATA	ARLRVGYRDSRGEDVFDI	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	23	4	0	85.2
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	253	10	9	1	0	90
Total	N/A	N/A	253	236	17	0	93.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  F  S  G  F  S  V  S  S  S  G  M  S  L  S  W  I  R  Q  P  P  G  K  A 
                    Query_2091   1    ACCCTGTCCCTCACCTGCACCTTCTCTGGGTTCTCGGTCAGCAGTAGTGGGATGTCTCTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCC  90
V  93.3% (236/253)  IGHV2-70*01  49   .....CA.A..G.......................AC......C......A....G.G................................  138
                                       T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R  Q  P  P  G  K  A 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  V  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T  I  S  K  D  T  S 
                    Query_2091   91   CTGGAGTGGCTTGTACTCATTGATTGGGATGATGATAAGTACTACAGCACATCTCTGAAGACCAGACTCACTATCTCCAAGGACACCTCC  180
V  93.3% (236/253)  IGHV2-70*01  139  .............C........................A..........................G.....C..................  228
                                       L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T  I  S  K  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  N  Q  V  V  L  K  M  T  N  M  D  P  V  D  T  A  K  Y  Y  C  A  R  L  R  V  G  Y  R  D 
                    Query_2091   181  AAAAACCAGGTGGTCCTTAAAATGACCAACATGGACCCTGTGGACACAGCCAAGTATTACTGTGCACGGCTACGCGTCGGCTACCGTGAT  270
V  93.3% (236/253)  IGHV2-70*01  229  ...................C................................C................A...-----------------  301
                                       K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  I                   
D  91.7% (11/12)    IGHD3-22*01  10   --------------------------------------------------------------------------------------....  13

                                      -IMGT--------------------->                                  
                                       S  R  G  E  D  V  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2091   271  AGTCGTGGGGAAGATGTTTTTGATATATGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  331
D  91.7% (11/12)    IGHD3-22*01  14   ...A....-----------------------------------------------------  21
J  95.9% (47/49)    IGHJ3*02     2    ------------....C.........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_296510

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           375     3e-106
IGHD3-3*01                                                                                            23.8    0.011 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACCGCCCCGCGAG	TTTTTGGAGTGG	GGCAGACCCT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACCGCCCCGCGAGTTTTTGGAGTGGGGCAGACCCTTACGGTATGGACGTC	ARYRPASFWSGADPYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	244	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  N  L  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2092   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAACTTGAACTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  98.4% (244/248)  IGHV3-21*01  47   ...................................................G.A...............................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2092   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAGTCACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (244/248)  IGHV3-21*01  137  ................................T.........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Y  R  P  A  S  F  W  
                    Query_2092   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGATACCGCCCCGCGAGTTTTTGGA  270
V  98.4% (244/248)  IGHV3-21*01  227  ....................................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD3-3*01   10   ----------------------------------------------------------------------------------........  17

                                      -IMGT----------------------->                                 
                                      S  G  A  D  P  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2092   271  GTGGGGCAGACCCTTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (12/12)   IGHD3-3*01   18   ....----------------------------------------------------------  21
J  100.0% (48/48)   IGHJ6*02     15   --------------................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_296511

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD1-26*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	GGG	GGTCTAGTGGAAGGTACTAC	CTCCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTAC	ARGGLVEGTTSFFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_2093   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCAACCTA  90
V  95.8% (277/289)  IGHV5-51*03  6    ..................................................................................A.C.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  F  G  W  V  R  Q  I  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_2093   91   CTGGTTCGGCTGGGTGCGCCAGATACCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGAGACTCTGATACCAGATACAGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   ....A...................G..........................G..............T.......................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  G  S  L  K  A  S  A  T  A
                    Query_2093   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGGGCAGCCTGAAGGCCTCGGCCACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  ............................................G...................A..................A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  A  R  G  G  L  V  E  G  T  T  S  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2093   271  CATTTATTACTGTGCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCGTC  360
V  95.8% (277/289)  IGHV5-51*03  276  ...G............A..-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  85.0% (17/20)    IGHD1-26*01  1    ----------------------...A......G..C......------------------------------------------------  20
J  97.7% (43/44)    IGHJ4*02     5    ------------------------------------------------.......................................C..  46

                                        
                                        
                    Query_2093   361  AG  362
J  97.7% (43/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_296512

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           330     1e-92
IGHD6-19*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GCGG	AGCAGGGGCT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGAGGCGGAGCAGGGGCTTACTATTACGGTATGGACGTC	SRGGAGAYYYGMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  G  A  S  G  F  T  F  S  R  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2094   1    GGTCCCTGAGACTCTCCTGTGGAGCCTCTGGATTCACCTTCAGTAGATATTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTCG  90
V  92.4% (230/249)  IGHV3-74*01  47   .....................C........................C..C......................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  S  S  D  G  G  S  K  H  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2094   91   TGTGGGTCTCACGCATTAGTAGTGATGGAGGTAGCAAACACTCCGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (230/249)  IGHV3-74*01  137  .............T....A.........GA......C.AG..A...............................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  F  C  S  R  G  G  A  G  A  Y  Y  
                    Query_2094   181  AGAACACACTCTATCTGCAAATGAACAGTCTGAGAGCCGACGACACGGCTGTCTATTTTTGTTCAAGAGGCGGAGCAGGGGCTTACTATT  270
V  92.4% (230/249)  IGHV3-74*01  227  .......G..G.............................G...........G....AC...G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD6-19*01  7    -------------------------------------------------------------------------.....T....-------  16
J  96.3% (52/54)    IGHJ6*02     9    -----------------------------------------------------------------------------------.....C.  15

                                      ------------->                                 
                                      Y  G  M  D  V  W  G  P  G  T  T  V  T  V  S  S 
                    Query_2094   271  ACGGTATGGACGTCTGGGGCCCAGGGACCACGGTCACCGTCTCCTCA  317
J  96.3% (52/54)    IGHJ6*02     16   .....................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_296513

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD6-19*01                                                                                           21.8    0.041
IGHJ5*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTCCCGC	GTATAGTAGTGGCT	ACGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTCCCGCGTATAGTAGTGGCTACGGCTGGTTCGGCTCC	ARDSPAYSSGYGWFGS	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  N  T  Y  Y  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_2095   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAATACTTACTACTGGAGTTGGATCCGGCAGACCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   ......................................C.G..G............C............C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_2095   91   TGGATTGGTTATATCTATTACACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G.............G.....G...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  T  L  R  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  D  S  P  A  Y  S  S  G  Y 
                    Query_2095   181  CAGTTCTCCCTGACGCTGAGGTCTGTGAGCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGATTCTCCCGCGTATAGTAGTGGCTAC  270
V  94.3% (231/245)  IGHV4-59*01  229  .............A......C.......C..................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  3    --------------------------------------------------------------------------......C.......--  16

                                      -------------->                                  
                                       G  W  F  G  S  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_2095   271  GGCTGGTTCGGCTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  319
J  93.6% (44/47)    IGHJ5*01     5    --........A............A.....................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_296516

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           360     1e-101
IGHD3-16*02                                                                                           21.8    0.046 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGC	TTTGGGGGATTTGTCGT	CATTAGTAGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCTTTGGGGGATTTGTCGTCATTAGTAGGCTTTGACTTC	ARALGDLSSLVGFDF	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	259	29	0	89.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  D  F  S  N  Y
                    Query_2096   1    GCAGCTGGTGCAGTCTGGCGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAAATCTCCTGTAAGGTGTCGGGATACGACTTTAGTAATTA  90
V  89.9% (259/288)  IGHV5-51*03  6    ..................A................................G.............GT..T......AG.....CC.GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  A  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  S  P
                    Query_2096   91   CTGGATTGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGCTTGGATGGGGATTATCTTTCCTGATGACTCTGACACCAGATACAGTCC  180
V  89.9% (259/288)  IGHV5-51*03  96   ......C..................................AG...........C....A.....G.........T...........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  P  V  T  M  S  V  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2096   181  GTCATTCCAAGGCCCGGTCACCATGTCAGTCGACAAGTCCATTAATACCGCCTACCTCCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  89.9% (259/288)  IGHV5-51*03  186  ...C..........A.........C....C............C.GC...........G................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  F  C  A  R  A  L  G  D  L  S  S  L  V  G  F  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2096   271  CATATATTTCTGTGCGAGGGCTTTGGGGGATTTGTCGTCATTAGTAGGCTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  89.9% (259/288)  IGHV5-51*03  276  ...G....A.........------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  88.2% (15/17)    IGHD3-16*02  15   ---------------------.........G..A....----------------------------------------------------  31
J  97.7% (43/44)    IGHJ4*02     5    ------------------------------------------------........A.................................  46

                                        
                                        
                    Query_2096   361  AG  362
J  97.7% (43/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_296518

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           350     8e-99
IGHD3-22*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTACTTTGAT	GGTGCTGGCTCTTACCTAGGTTTCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACTTTGATGGTGCTGGCTCTTACCTAGGTTTCCAC	ARDYFDGAGSYLGFH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  F  S  G  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2097   1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCATCTTCAGTGGCTATGGCATGAACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-33*01  47   ....................G...............C.......A...........C.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_2097   91   AGTGGGTGGCCCTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGCTTCACCGTCTCCAGAGACAACTCCA  180
V  94.8% (237/250)  IGHV3-33*01  137  ..........AG....................................................A......A.............T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  D  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  F  D  G  A  G  
                    Query_2097   181  AGGACACACTGTATCTGCAGATGGACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTACTTTGATGGTGCTGGCT  270
V  94.8% (237/250)  IGHV3-33*01  227  ..A....G...........A...A..............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-22*01  4    ----------------------------------------------------------------------.....A....----------  13

                                      ---------------->                                  
                                      S  Y  L  G  F  H  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_2097   271  CTTACCTAGGTTTCCACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  321
J  97.2% (35/36)    IGHJ4*02     13   ---------------.......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_296519

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           300     8e-84
IGHD2-15*01                                                                                           12.2    31   
IGHJ3*01                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGCCG	GGTAGC	GTCC	CTTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATGGGCCGGGTAGCGTCCCTTATGATGTT	VRDGPGSVPYDV	249	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	110	57	45	6	6	78.9
CDR2-IMGT	111	134	24	19	5	0	79.2
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	256	8	6	2	0	75
Total	N/A	N/A	256	226	24	6	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><-----------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  A  S  R  F  S  F  R  S  H  W  M  N  W  L  R  Q  V  P  G  K  G  Q  
                    Query_2098   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTAGATTCAGCTTCAGGAGCCACTGGATGAACTGGCTCCGCCAAGTTCCAGGGAAGGGGCAGG  90
V  88.3% (226/256)  IGHV3-74*01  47   .............................G......C......T...T........C.....G.........C............-----  131
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G     

                                      -------------------><-------CDR2-IMGT------><---------------------------------------------
                                      G  L  V  W  L  S  H  I  N  P  D  G  T  R  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  
                    Query_2098   91   GGCTGGTGTGGCTTTCACATATTAATCCTGATGGGACCAGAACAAATTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACG  180
V  88.3% (226/256)  IGHV3-74*01  132  -..........G.C....G.......AG........GT..C....GC..........................................A  220
                                         L  V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------CDR3-IMG
                                      D  A  K  D  T  L  F  L  Q  M  T  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  G  P  G  S  
                    Query_2098   181  ACGCCAAGGACACGCTGTTTCTGCAAATGACCAGTCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGTGAGAGATGGGCCGGGTAGCG  270
V  88.3% (226/256)  IGHV3-74*01  221  ........A.........A...........A.................................C....CA.....--------------  296
                                      N  A  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                 
D  100.0% (6/6)     IGHD2-15*01  17   -----------------------------------------------------------------------------------......-  22

                                      T------------>                                  
                                      V  P  Y  D  V  W  G  Q  G  I  M  V  T  V  S  P  
                    Query_2098   271  TCCCTTATGATGTTTGGGGCCAAGGGATCATGGTCACCGTGTCTCCAG  318
J  86.7% (39/45)    IGHJ3*01     6    ---...T......C.............CA...........C...T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_247898

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           360     1e-101
IGHD6-19*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	AG	TAGCAGTGGCTGGT	G	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGTAGCAGTGGCTGGTGTTGACTAC	TVAVAGVDY	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	250	2	2	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_2099   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCCATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  96.0% (240/250)  IGHV3-73*01  47   .........A..........................................T.....................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  S  K  A  K  S  Y  A  T  A  Y  A  A  S  V  K  V  R  F  T  I  S  R  D  
                    Query_2099   91   AGTGGGTGGGCCGTATTAGAAGCAAAGCTAAGAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGTCAGGTTCACCATCTCTAGAGATG  180
V  96.0% (240/250)  IGHV3-73*01  137  .......T.......................C..................................G...............C.......  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  K  N  M  T  Y  L  Q  M  N  S  L  R  T  E  D  T  A  V  Y  Y  C  T  V  A  V  A  G  V  
                    Query_2099   181  ATTCAAAGAACATGACGTATCTGCAAATGAACAGCCTGAGAACCGAGGACACGGCCGTCTATTACTGTACAGTAGCAGTGGCTGGTGTTG  270
V  96.0% (240/250)  IGHV3-73*01  227  ............C.G........................A..................G...........--------------------  296
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (14/14)   IGHD6-19*01  6    ------------------------------------------------------------------------..............----  19
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2099   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (42/42)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_212461

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           434     4e-124
IGHD6-13*01                                                                                           12.2    35    
IGHJ3*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGGAAGCGGGCCGCACA	TGGTAC	GC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGGAAGCGGGCCGCACATGGTACGCCTTTTGATATC	AWKRAAHGTPFDI	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	282	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_2100   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCACCTA  90
V  98.6% (282/286)  IGHV5-51*01  6    ......................................................................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_2100   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.6% (282/286)  IGHV5-51*01  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  G  T  A
                    Query_2100   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGGCACCGC  270
V  98.6% (282/286)  IGHV5-51*01  186  ............................................G......................................A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        I  Y  Y  C  A  W  K  R  A  A  H  G  T  P  F  D  I  W  G  Q  G  T  M  V  S  V  S  S  
                    Query_2100   271  CATTTATTACTGTGCGTGGAAGCGGGCCGCACATGGTACGCCTTTTGATATCTGGGGCCAGGGGACTATGGTCAGCGTCTCTTCAG  356
V  98.6% (282/286)  IGHV5-51*01  276  ...G............----------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                       
D  100.0% (6/6)     IGHD6-13*01  16   ---------------------------------......-----------------------------------------------  21
J  93.3% (42/45)    IGHJ3*02     6    -----------------------------------------...................A.....A.......C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_199653

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           277     9e-77
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	CCTGTCCCGCGTTATGG	TTTTTGGAATGGTTATT	CCAAAATCTAACTCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCCTGTCCCGCGTTATGGTTTTTGGAATGGTTATTCCAAAATCTAACTCTTTCGACACC	ARGLSRVMVFGMVIPKSNSFDT	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	211	34	0	86.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  L  D  G  H  Y  W  T  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_2101   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGGTCGCTCGATGGTCACTACTGGACCTGGATACGCCAGGCCCCAGGGAAGGGTCTGGAG  90
V  86.1% (211/245)  IGHV4-34*01  49   ..................G......A.........CT..AG....T.........G......C......C.............G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  T  G  D  T  N  Y  N  S  S  L  K  S  R  V  G  L  S  V  D  A  S  R  N 
                    Query_2101   91   TGGATTGGGGAGATTTCTCATACTGGAGACACCAACTACAACTCGTCCCTCAAGAGTCGAGTCGGCTTGTCAGTTGACGCGTCCAGGAAC  180
V  86.1% (211/245)  IGHV4-34*01  139  ...........A..CAA.....G....AG.............C....................AC.A.A.....A...A......A....  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  T  S  L  T  G  A  D  T  G  V  Y  Y  C  A  R  G  L  S  R  V  M  V  F  G 
                    Query_2101   181  CAGTTCTCCCTGAAGTTGACCTCCCTGACCGGCGCGGACACGGGTGTCTATTACTGTGCGCGAGGCCTGTCCCGCGTTATGGTTTTTGGA  270
V  86.1% (211/245)  IGHV4-34*01  229  ...............C...G...TG......C...........C...G............A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  94.1% (16/17)    IGHD3-3*01   10   ----------------------------------------------------------------------------------........  17

                                      -IMGT--------------------------->                                  
                                       M  V  I  P  K  S  N  S  F  D  T  W  G  P  G  V  L  V  T  V  S  S  
                    Query_2101   271  ATGGTTATTCCAAAATCTAACTCTTTCGACACCTGGGGCCCGGGAGTCCTGGTTACCGTCTCCTCAG  337
D  94.1% (16/17)    IGHD3-3*01   18   G........----------------------------------------------------------  26
J  88.4% (38/43)    IGHJ5*02     9    ------------------------......C.........A....AC......C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_248853

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           324     8e-91
IGHD1-1*01                                                                                            10.3    124  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTCTCACAAGGCTTCGGATGG	CAACT	CGGACCCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGAGGGTCTCACAAGGCTTCGGATGGCAACTCGGACCCTCACTTTGACTAC	SRGSHKASDGNSDPHFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  F  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2102   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTAATTTTGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-30*04  47   ....................................C........GC.A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  R  G  R  N  K  N  Y  E  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2102   91   AGTGGGTGGCTGTTATATCATACCGAGGAAGAAATAAAAACTACGAAGACTCCGTGAAGGGCCGCTTTACCATCTCCAGAGACAATTCCA  180
V  91.6% (228/249)  IGHV3-30*04  137  ..........A...........TGAT.....T......T......C..................A..C......................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  S  L  E  M  N  S  L  R  T  E  D  T  A  V  Y  F  C  S  R  G  S  H  K  A  S  D  
                    Query_2102   181  AGAACACGCTGTCTCTGGAAATGAACAGCCTGAGAACTGAGGACACGGCTGTCTACTTCTGTTCGAGAGGGTCTCACAAGGCTTCGGATG  270
V  91.6% (228/249)  IGHV3-30*04  227  ............A....C.................G................G..T.A....G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      IMGT--------------------->                                  
                                      G  N  S  D  P  H  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_2102   271  GCAACTCGGACCCTCACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCTTCAG  330
D  100.0% (5/5)     IGHD1-1*01   5    -.....------------------------------------------------------  9
J  95.6% (43/45)    IGHJ4*02     4    ---------------........................C...............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_248850

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD6-6*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTC	ATTREQLVPIFDF	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	269	18	0	93.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  L  S  S  Y
                    Query_2103   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATTTCCTGTAAGGGTTCTGGATACAGATTAAGCAGTTA  90
V  93.7% (269/287)  IGHV5-51*01  6    ......................................................C.......................C..T.C...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  E  T  K  Y  S  P
                    Query_2103   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCGTCTATCCTGGTGACTCTGAGACCAAATACAGCCC  180
V  93.7% (269/287)  IGHV5-51*01  96   C.......G..........................................G...A...................T....G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  A  S  G  T  A  F  L  Q  W  D  S  L  K  A  S  D  T  A
                    Query_2103   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGGCCAGCGGCACCGCCTTCCTGCAGTGGGACAGCCTGAAGGCCTCGGACACCGC  270
V  93.7% (269/287)  IGHV5-51*01  186  .......C.............................T...T.A.........A..........AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_2103   271  CATGTATTACTGTGCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  356
V  93.7% (269/287)  IGHV5-51*01  276  .................---------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------.......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_199650

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD5-18*01                                                                                           14.1    8.4  
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTG	GTGAATACAG	N/A	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTGGTGAATACAGCAACTGGGTCGACCCC	ARDSGEYSNWVDP	250	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	135	27	19	2	6	70.4
FR3-IMGT	136	249	114	105	9	0	92.1
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	233	18	6	90.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  V  S  S  G  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_2104   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCGTCAGCAGTGGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGG  90
V  90.7% (233/257)  IGHV4-61*01  49   ...................C...........G.............................G...........................A  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  H  I  Y  N  Y  N  R  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D 
                    Query_2104   91   CTGGAGTGGATCGGTCATATCTATAACTATAACAGAGGGAGCACCAATTATAATCCCTCCCTCCAAAGTCGAGTCACCATATCAGTAGAC  180
V  90.7% (233/257)  IGHV4-61*01  139  ...........T..GT........T..------..T...........C..C..C.........A.G........................  222
                                       L  E  W  I  G  Y  I  Y  Y        S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------CDR3-I
                                       T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  G  E  Y 
                    Query_2104   181  ACATCCAAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATTCTGGTGAATAC  270
V  90.7% (233/257)  IGHV4-61*01  223  ..G........................C...G...........................G.................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  90.0% (9/10)     IGHD5-18*01  1    ----------------------------------------------------------------------------------...G....  8

                                      MGT-------------->                                  
                                       S  N  W  V  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2104   271  AGCAACTGGGTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  90.0% (9/10)     IGHD5-18*01  9    ..--------------------------------------------------  10
J  98.0% (49/50)    IGHJ5*02     2    --.......T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_248857

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           310     1e-86
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	51	0	0	100
CDR2-IMGT	102	125	24	16	8	0	66.7
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	232	215	17	0	92.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  
                    Query_2105   16   GTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTA  105
V  92.7% (215/232)  IGHV3-21*01  65   ..........................AG..............................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  K  K  S  V  F  L  
                    Query_2105   106  GTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCAAGAAGTCAGTGTTTCTGC  195
V  92.7% (215/232)  IGHV3-21*01  155  ..AG.AG..G..G.T....A........A.......................................G.......C...C...A.....  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------------CDR3-IMGT--------------
                                      Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  G  Y  P  L  D  G  
                    Query_2105   196  AAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTA  285
V  92.7% (215/232)  IGHV3-21*01  245  ......................G...........G.................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------...............-------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------------------------------------------------------------------------------......  21

                                      ------->                                 
                                      M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2105   286  TGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (47/47)   IGHJ6*02     22   .........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_199655

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           12.2    34   
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GCCGCGAAAATCGGTCTTTGGACTACTTATCCC	TGGGGG	GGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCCGCGAAAATCGGTCTTTGGACTACTTATCCCTGGGGGGGGCGACTGGTTCGACCCC	ARGPRKSVFGLLIPGGGDWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  D  Y  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2106   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCGATTACTATTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (233/245)  IGHV4-34*01  49   .......................................AG.GGT..C..........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  G  A  T  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2106   91   TGGATTGGGGAAATCAATCATGGTGCAACGACCAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  .....................A...G..GC............C...............................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  K  S  V  F  G  L 
                    Query_2106   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGCCGCGAAAATCGGTCTTTGGACTA  270
V  95.1% (233/245)  IGHV4-34*01  229  ....................C............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      -IMGT--------------------------->                                  
                                       L  I  P  G  G  G  D  W  F  D  P  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_2106   271  CTTATCCCTGGGGGGGGCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  337
D  100.0% (6/6)     IGHD3-16*01  17   --------......-----------------------------------------------------  22
J  97.9% (47/48)    IGHJ5*02     4    -------------------................................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_199654

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           382     3e-108
IGHD6-13*01                                                                                           18.0    0.59  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CACG	AGCAGCTGG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACACGAGCAGCTGGATTGACTAC	ARDTSSWIDY	261	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	22	2	0	91.7
FR2-IMGT	75	125	51	51	0	0	100
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	109	5	0	95.6
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	256	12	0	95.5


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  G  T  L  P  L  T  C  T  V  S  G  V  S  I  S  T  Y  Y  W  S  W  I  R  
                    Query_2107   1    CAGGACTGGTGAAGCCCTCGGGGACCCTGCCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTACTTACTACTGGAGCTGGATCCGGC  90
V  95.5% (256/268)  IGHV4-59*01  26   ................T....A.......T........................G...........G.......................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  F  Y  T  G  S  T  N  Y  N  P  S  L  K  S  Q  F  T  
                    Query_2107   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTTTTACACTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCAATTCACCA  180
V  95.5% (256/268)  IGHV4-59*01  116  .......................................A.....G...................................G.G......  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  
                    Query_2107   181  TATCAGTAGACACGTCGAAGAACCAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACA  270
V  95.5% (256/268)  IGHV4-59*01  206  ................C.....................C...G.............................................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -CDR3-IMGT--------->                                  
                                      T  S  S  W  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2107   271  CGAGCAGCTGGATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (9/9)     IGHD6-13*01  10   --.........-------------------------------------------  18
J  100.0% (42/42)   IGHJ4*02     7    ------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_248858

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           325     3e-91
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CCCTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCCCTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASPGYGRDAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_2108   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  92.6% (226/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  N  Y  T  P  S  L  K  P  R  V  T  I  S  L  D  T  S  K  D 
                    Query_2108   91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACACCCCCTCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGTCCAAGGAC  180
V  92.6% (226/244)  IGHV4-59*08  139  ...A....G......T.......T................A.............AG............A...G..............A..  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  P  G 
                    Query_2108   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCCCTGGT  270
V  92.6% (226/244)  IGHV4-59*08  229  .............A......C..........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_2108   271  TATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  334
J  94.2% (49/52)    IGHJ1*01     1    ------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_248859

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD6-19*01                                                                                           21.8    0.040 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGCCCCCCGTACCGCA	TATAGCAGTGCCTG	CCACG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGCCCCCCGTACCGCATATAGCAGTGCCTGCCACGGACTAC	ARWPPVPHIAVPATDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  R  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2109   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTAGGTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.9% (238/243)  IGHV4-59*01  49   ......................................C.....T.............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  M  N 
                    Query_2109   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCATGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  .....................................................................................A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  M  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  W  P  P  V  P  H  I  A  V 
                    Query_2109   181  CAGTTCTCCCTGAAGATGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGATGGCCCCCCGTACCGCATATAGCAGTG  270
V  97.9% (238/243)  IGHV4-59*01  229  ...............C.....................................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  4    --------------------------------------------------------------------------------..........  13

                                      -------------->                                  
                                       P  A  T  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_2109   271  CCTGCCACGGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  319
D  92.9% (13/14)    IGHD6-19*01  14   G...---------------------------------------------  17
J  97.5% (39/40)    IGHJ4*02     9    ---------............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_175138

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           341     5e-96
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	CTATATCTCAACGTCATCCAAGATTCCGATGAA	AGCAGTGG	GCCGACGGGACT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CTATATCTCAACGTCATCCAAGATTCCGATGAAAGCAGTGGGCCGACGGGACTCTAC	LYLNVIQDSDESSGPTGLY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	108	6	0	94.7
Total	N/A	N/A	242	230	12	0	95


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2110   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.0% (230/242)  IGHV3-30*03  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  H  D  G  I  N  D  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2110   91   AGTGGGTGGCAGTTATTTCACATGATGGAATTAATGATTATTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.0% (230/242)  IGHV3-30*03  137  ................A...T.........G....A.A..C....C............................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  F  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  H  C  L  Y  L  N  V  I  Q  D  S  
                    Query_2110   181  AGAACACGTTGTTTCTGCAAATGAACAGCCTGACAGCTGAGGACACGGCTGTGTATCACTGTCTATATCTCAACGTCATCCAAGATTCCG  270
V  95.0% (230/242)  IGHV3-30*03  227  ........C...A....................G......................T.....----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             

                                      -IMGT----------------------->                                  
                                      D  E  S  S  G  P  T  G  L  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2110   271  ATGAAAGCAGTGGGCCGACGGGACTCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (8/8)     IGHD6-19*01  7    -----........--------------------------------------------------  14
J  100.0% (38/38)   IGHJ4*02     11   -------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_23404

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            332     3e-93
IGHD1-26*01                                                                                           10.3    121  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTGCCAT	GGAGC	AATGGACCCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTGCCATGGAGCAATGGACCCAATACTACTTTGACGCC	ARSAMEQWTQYYFDA	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_2111   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAGTAGTTATTGGATGACCTGGGTCCGCCAGGCTCCAGGTAAGGGGCTGG  90
V  92.7% (230/248)  IGHV3-7*01   47   .....................C........................C..........G.....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  V  E  Y  Y  V  D  S  V  R  G  R  F  T  M  S  R  D  N  A  
                    Query_2111   91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGTGGAATACTACGTGGACTCTGTGAGGGGCCGATTCACCATGTCCAGAGACAACGCCA  180
V  92.7% (230/248)  IGHV3-7*01   137  ....................C............A.A.......T.............A...............C................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  S  V  S  L  Q  M  S  S  L  T  A  E  D  T  A  V  Y  Y  C  A  R  S  A  M  E  Q  W  T  
                    Query_2111   181  GGAACTCAGTCTCTCTGCAAATGAGCAGCCTGACAGCCGAGGACACGGCTGTATACTACTGTGCGAGATCTGCCATGGAGCAATGGACCC  270
V  92.7% (230/248)  IGHV3-7*01   227  A.......C.G.A...........A........G..................G..T............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  10   ----------------------------------------------------------------------------.....---------  14

                                      ---------------->                                
                                      Q  Y  Y  F  D  A  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2111   271  AATACTACTTTGACGCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
J  95.7% (44/46)    IGHJ4*02     1    ---...........TA.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_84062

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           369     2e-104
IGHD1-1*01                                                                                            18.0    0.64  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCTT	TACAACTGG	GTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCTTTACAACTGGGTTTTTGACTTC	ARGLYNWVFDF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	263	27	0	90.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  D  T  F  T  S  Y
                    Query_2112   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCGGGGTCCTCGGTGAGGGTCTCCTGCAAGGCTTCTGGAGACACCTTCACTAGTTA  90
V  90.7% (263/290)  IGHV1-69*01  6    ..................G.................T.............A.......................G........GC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        S  I  S  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  G  I  I  P  R  F  G  T  K  N  Y  A  Q
                    Query_2112   91   CAGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGAGGCATCATCCCCAGGTTTGGTACAAAGAATTACGCACA  180
V  90.7% (263/290)  IGHV1-69*01  96   TGC...................................T...............G........T.TC.........GCA..C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  G  P  T  S  T  V  Y  M  D  L  S  S  L  T  S  E  D  T  A
                    Query_2112   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGGACCCACGAGCACAGTCTACATGGACCTGAGCAGCCTGACATCTGAGGACACGGC  270
V  90.7% (263/290)  IGHV1-69*01  186  ...................................A.T............C.........G.............G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                 
                                        T  Y  Y  C  A  R  G  L  Y  N  W  V  F  D  F  W  G  Q  G  S  L  V  T  V  S  S 
                    Query_2112   271  CACATATTACTGTGCGAGAGGGCTTTACAACTGGGTTTTTGACTTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCA  349
V  90.7% (263/290)  IGHV1-69*01  276  .GTG................-----------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                             
D  100.0% (9/9)     IGHD1-1*01   3    -------------------------.........---------------------------------------------  11
J  95.2% (40/42)    IGHJ4*02     6    -------------------------------------.......A.............A....................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_84063

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           319     2e-89
IGHD6-13*01                                                                                           12.2    31   
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-13*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	A	TGGTAC	N/A	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGTACATGCTTTTGATATC	ARMVHAFDI	246	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_2113   4    CCCTGAGACTCTCCTGTACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  91.1% (226/248)  IGHV4-61*01  50   .....TCC...A....C.....C.................C....G.AG.T.......................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  C  I  G  Y  I  Y  Y  M  G  S  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  L  D  T  S  
                    Query_2113   94   TGGAGTGCATTGGATATATCTATTACATGGGGAGCACCAACTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCATTAGACACATCCA  183
V  91.1% (226/248)  IGHV4-61*01  140  .......G.....G.............GT...........................A....................G.......G....  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  M  V  H  A  F  D  I  
                    Query_2113   184  AGAACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTTTATTACTGTGCGAGAATGGTACATGCTTTTGATATCT  273
V  91.1% (226/248)  IGHV4-61*01  230  ........................G............T..G...........G...............----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD6-13*01  16   ---------------------------------------------------------------------......---------------  21
J  95.8% (46/48)    IGHJ3*02     3    ---------------------------------------------------------------------------...............  17

                                                                       
                                      W  G  R  G  T  M  V  T  V  S  S  
                    Query_2113   274  GGGGCCGGGGGACAATGGTCACCGTCTCTTCAG  306
J  95.8% (46/48)    IGHJ3*02     18   ......AA.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_84064

Length=413
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           375     3e-106
IGHD3-3*01                                                                                            16.1    2.7   
IGHJ5*01                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAAACAGTCGGCACCCTGAGA	ATTATACC	CCCACGTCGGACGTTCTAG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAAACAGTCGGCACCCTGAGAATTATACCCCCACGTCGGACGTTCTAGGGTTCGACTCC	ARRNSRHPENYTPTSDVLGFDS	292	357	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	44	7	0	86.3
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	99	15	0	86.8
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	294	267	27	0	90.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  G  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_2114   5    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGGGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  94
V  90.8% (267/294)  IGHV5-51*01  2    ....G.........................T...........................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  W  R  Q  M  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_2114   95   GTTACTGGATCGCTTGGTGGCGCCAGATGCCCGGGAAAGGCCTGGAATTAATGGGGATCATCTACCCTGGTGACTCTGATACTAGATACA  184
V  90.8% (267/294)  IGHV5-51*01  92   .C..........GC...GT...........................G.GG..............T.................C.......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  Q  G  Q  A  T  I  Y  A  D  K  S  I  S  P  A  Y  L  Q  M  S  S  L  K  A  S  D  
                    Query_2114   185  ATCCGTCCTTCCAAGGTCAGGCCACCATTTATGCCGACAAGTCCATCAGCCCCGCCTACCTGCAGATGAGCAGCCTGAAGGCCTCGGACC  274
V  90.8% (267/294)  IGHV5-51*01  182  GC..............C....T......C.CA..................A..............TG......................A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------------------CDR3-IMGT--------------------------->       
                                      P  A  K  Y  F  C  A  R  R  N  S  R  H  P  E  N  Y  T  P  T  S  D  V  L  G  F  D  S  W  G  
                    Query_2114   275  CCGCCAAATACTTCTGTGCGAGACGAAACAGTCGGCACCCTGAGAATTATACCCCCACGTCGGACGTTCTAGGGTTCGACTCCTGGGGCC  364
V  90.8% (267/294)  IGHV5-51*01  272  ......TG..T.A...........------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD3-3*01   24   ---------------------------------------------........-------------------------------------  31
J  97.8% (44/45)    IGHJ5*01     7    ------------------------------------------------------------------------..................  24

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_2114   365  AGGGAACCCTGGTCACCGTCTCCTCAG  391
J  97.8% (44/45)    IGHJ5*01     25   .A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40498920


Query= Query_48509

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2115   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2115   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_2115   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  98.0% (50/51)    IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  *  G  Q  G  T  L  V  T  V  S  S  
                    Query_2115   271  GACCCCTAGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  98.0% (50/51)    IGHJ5*02     12   .......G................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_84066

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           325     3e-91
IGHD1-1*01                                                                                            14.1    8.8  
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-1*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AATCCTCCTTCGAAGGGACCAAGGC	CAACTGG	CCGGG	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAAATCCTCCTTCGAAGGGACCAAGGCCAACTGGCCGGGTGGTACTTCGATCTC	VREILLRRDQGQLAGWYFDL	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  D  F  S  G  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2116   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGCTTCGACTTCAGTGGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-21*01  47   .....................C.........A...AC.......A.C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  G  N  T  Y  I  F  Y  A  D  S  V  K  G  *  F  T  V  S  R  D  N  A  
                    Query_2116   91   AGTGGGTCTCATCCATTAGTAGTGGGAATACTTACATTTTCTACGCAGACTCAGTGAAGGGCTGATTCACCGTCTCCAGAGACAACGCCA  180
V  91.6% (229/250)  IGHV3-21*01  137  .......................A.T.G..G......A.A......................C........A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  S  L  Q  M  S  G  L  R  A  D  D  T  A  V  Y  Y  C  V  R  E  I  L  L  R  R  D  
                    Query_2116   181  AGAACTCACTGTCTCTACAAATGAGCGGCCTGAGAGCCGACGACACGGCTGTATATTACTGTGTGAGAGAAATCCTCCTTCGAAGGGACC  270
V  91.6% (229/250)  IGHV3-21*01  227  ............A...G.......A.A.............G...........G..........C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      Q  G  Q  L  A  G  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_2116   271  AAGGCCAACTGGCCGGGTGGTACTTCGATCTCTGGGGCCGCGGCACCCTGGTCGCTGTCTCCTCAG  336
D  100.0% (7/7)     IGHD1-1*01   5    -----.......------------------------------------------------------  11
J  95.9% (47/49)    IGHJ2*01     5    -----------------.......................T............A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_84067

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           388     4e-110
IGHD6-13*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCGG	AGCAGCAGCTGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCGGAGCAGCAGCTGGTTGACTAC	ARDSEQQLVDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	249	1	0	99.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2117   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.6% (249/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  I  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2117   91   AGTGGGTCTCATCCATTAGTAGTAGTATTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  99.6% (249/250)  IGHV3-21*01  137  ...........................G..............................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  E  Q  Q  L  V  
                    Query_2117   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTCGGAGCAGCAGCTGGTTG  270
V  99.6% (249/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD6-13*01  7    ---------------------------------------------------------------------------............---  18
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2117   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (42/42)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_82882

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           282     4e-78
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	217	27	6	86.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_2118   4    CCCTGAGACTCTCCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.8% (217/250)  IGHV4-34*01  50   .....TCC...A..........C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_2118   94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.8% (217/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_2118   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.8% (217/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_2118   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_321725

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           299     2e-83
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GGGTATCAGTGC	CTATGGTTCGGGGAG	CGC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGGGTATCAGTGCCTATGGTTCGGGGAGCGCTATGGACGTC	VKGISAYGSGSAMDV	239	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	49	2	0	96.1
CDR2-IMGT	101	124	24	21	3	0	87.5
FR3-IMGT	125	238	114	103	11	0	90.4
CDR3-IMGT (germline)	239	243	5	4	1	0	80
Total	N/A	N/A	229	210	19	0	91.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  R  S  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  
                    Query_2119   15   GTGCAGCCTCTGGATTCACCTTTAGAAGCCATGCCATGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTA  104
V  91.7% (210/229)  IGHV3-23*01  65   .........................C...T...................C..................................C.....  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  N  G  G  T  T  H  Y  A  D  S  V  Q  G  R  S  I  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_2119   105  GTGGCAATGGTGGTACCACACATTACGCGGACTCCGTGCAGGGCCGGTCCATCATCTCCAGAGACAATTCCAAGAACACCTTGTATCTGC  194
V  91.7% (210/229)  IGHV3-23*01  155  ....T.G........G....T.C.....A.........A.........T..C...........................GC.........  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      Q  M  N  T  L  R  A  G  D  T  A  V  Y  Y  C  V  K  G  I  S  A  Y  G  S  G  S  A  M  D  V  
                    Query_2119   195  AAATGAACACCCTGAGAGCCGGGGACACGGCCGTTTATTACTGTGTGAAGGGTATCAGTGCCTATGGTTCGGGGAGCGCTATGGACGTCT  284
V  91.7% (210/229)  IGHV3-23*01  245  .........G...........A............A..........C...-----------------------------------------  293
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (15/15)   IGHD3-10*01  7    -------------------------------------------------------------...............--------------  21
J  100.0% (43/43)   IGHJ6*02     20   -------------------------------------------------------------------------------...........  30

                                                                      
                                      W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2119   285  GGGGCCAAGGGACCACGGTCACCGTCTCCTCA  316
J  100.0% (43/43)   IGHJ6*02     31   ................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_95211

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         371     7e-105
IGHD3-22*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	AC	TTACTATGATAGTAGTGGTTCTTAC	CTTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACTTACTATGATAGTAGTGGTTCTTACCTTAACTACTTTGACTAC	ARTYYDSSGSYLNYFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	243	6	0	97.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  V  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_2120     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGTCTCCATCAGGAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  97.6% (243/249)  IGHV4-30-4*01  49   ..................A............G.........C.......A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_2120     91   CTGGAGTGGATTGGGTACATTTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAATTACCATATCAGTAGACACGTCC  180
V  97.6% (243/249)  IGHV4-30-4*01  139  ....................C.............................................G.......................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  Y  Y  D  S  S  G 
                    Query_2120     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAACTTACTATGATAGTAGTGGT  270
V  97.6% (243/249)  IGHV4-30-4*01  229  .....................................................................---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  96.0% (24/25)    IGHD3-22*01    4    -----------------------------------------------------------------------...................  22

                                        MGT-------------------->                                  
                                         S  Y  L  N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2120     271  TCTTACCTTAACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  96.0% (24/25)    IGHD3-22*01    23   .A....----------------------------------------------------  28
J  100.0% (48/48)   IGHJ4*02       1    ----------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_321327

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            349     2e-98
IGHD6-19*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	GTGG	ATAACAGTGGCTGGTAC	GGAGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATGTGGATAACAGTGGCTGGTACGGAGGCTTTGACTCC	AKDVDNSGWYGGFDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	251	9	9	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2121   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGACTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  94.4% (237/251)  IGHV3-9*01   47   ..............................................T...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  T  N  W  N  S  N  S  I  G  Y  A  D  S  V  T  G  R  F  T  I  S  K  D  N  A  
                    Query_2121   91   AGTGGGTCTCAAGTACTAATTGGAATAGTAATAGCATAGGCTATGCGGACTCTGTGACGGGCCGATTCACCATCTCCAAAGACAACGCCA  180
V  94.4% (237/251)  IGHV3-9*01   137  ...........G...T..G..........GG..........................A....................G...........  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  F  L  Y  L  Q  M  N  G  L  R  P  E  D  T  A  F  Y  Y  C  A  K  D  V  D  N  S  G  W  
                    Query_2121   181  AGAATTTCCTGTATCTGCAAATGAACGGTCTGAGACCTGAAGACACGGCCTTCTATTACTGTGCAAAAGATGTGGATAACAGTGGCTGGT  270
V  94.4% (237/251)  IGHV3-9*01   227  ....C.C...................A........G....G...........G..................-------------------  297
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  94.1% (16/17)    IGHD6-19*01  5    ---------------------------------------------------------------------------...G...........  19

                                      ---------------->                                  
                                      Y  G  G  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2121   271  ACGGAGGCTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  94.1% (16/17)    IGHD6-19*01  20   ..-------------------------------------------------  21
J  97.7% (43/44)    IGHJ4*02     5    -------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_321324

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         283     1e-78
IGHD7-27*01                                                                                           12.2    30   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CT	TAATTGGGG	CGCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAATTGGGGCGCATTTGACTCC	ARLNWGAFDS	237	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	20	4	0	83.3
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	18	6	0	75
FR3-IMGT	123	236	114	101	13	0	88.6
CDR3-IMGT (germline)	237	242	6	6	0	0	100
Total	N/A	N/A	231	206	25	0	89.2


Alignments

                                        <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                         C  A  A  S  G  F  T  F  S  T  F  A  M  H  W  V  R  Q  V  P  G  K  G  L  D  W  V  A  V  L 
                    Query_2122     12   TGTGCAGCCTCTGGATTCACTTTCAGTACTTTTGCTATGCACTGGGTCCGCCAGGTTCCAGGCAAGGGGCTGGACTGGGTGGCAGTTCTG  101
V  89.2% (206/231)  IGHV3-30-3*01  64   ....................C.......GC.A.......................C..................G............A.A  153
                                         C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                        -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                         S  H  D  A  S  S  E  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_2122     102  TCACATGATGCAAGCAGTGAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCAAGGGACAATTCCAAGAACACGCTATATTTG  191
V  89.2% (206/231)  IGHV3-30-3*01  154  ...T......G.....A.A........................................C..A....................G...C..  243
                                         S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                        --------------------------------------------><----------CDR3-IMGT--------->               
                                         E  M  H  S  L  G  V  D  D  T  A  I  Y  Y  C  A  R  L  N  W  G  A  F  D  S  W  G  Q  G  T 
                    Query_2122     192  GAGATGCACAGCCTTGGAGTTGACGACACGGCTATTTATTACTGTGCGAGACTTAATTGGGGCGCATTTGACTCCTGGGGCCAGGGAACC  281
V  89.2% (206/231)  IGHV3-30-3*01  244  C.A...A.......GA...C...G.........G.G...............---------------------------------------  294
                                         Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  88.9% (8/9)      IGHD7-27*01    2    -----------------------------------------------------...C.....----------------------------  10
J  97.7% (42/43)    IGHJ4*02       6    ------------------------------------------------------------------.......A................  29

                                                           
                                         L  V  T  V  S  S  
                    Query_2122     282  CTGGTCACCGTCTCCTCAG  300
J  97.7% (42/43)    IGHJ4*02       30   ...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_321325

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         397     8e-113
IGHD6-19*01                                                                                           21.8    0.047 
IGHJ3*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CACCCCCTC	ATAACAGTGGCTGG	AAGGTTTC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACCCCCTCATAACAGTGGCTGGAAGGTTTCATGCTTTTGAAATC	ARHPLITVAGRFHAFEI	291	341	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	67	4	0	94.4
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                        <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                           Q  L  V  Q  S  G  A  V  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  P  S  
                    Query_2123     7    TGCAGCTGGTGCAGTCTGGAGCAGTTGTGAAGAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGCTCTGGATACAGTTTTCCCTCTT  96
V  93.8% (272/290)  IGHV5-10-1*01  5    ........................AG.....A...................................T...........C...A..AGC.  94
                                           Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  

                                        ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                        Y  W  I  T  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  S  Y  S  
                    Query_2123     97   ACTGGATCACCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAGCTACAGCC  186
V  93.8% (272/290)  IGHV5-10-1*01  95   .........G..............T........................................................A........  184
                                        Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  

                                        -------------------------------------------FR3-IMGT---------------------------------------
                                        P  S  L  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  
                    Query_2123     187  CGTCCCTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCACTAGCACTGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCG  276
V  93.8% (272/290)  IGHV5-10-1*01  185  .....T....................................TC..............................A...............  274
                                        P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                        -------------><--------------------CDR3-IMGT-------------------->                         
                                        A  I  Y  F  C  A  R  H  P  L  I  T  V  A  G  R  F  H  A  F  E  I  W  G  Q  G  T  M  V  T  
                    Query_2123     277  CCATCTATTTCTGTGCGAGACACCCCCTCATAACAGTGGCTGGAAGGTTTCATGCTTTTGAAATCTGGGGCCAAGGGACAATGGTCACCG  366
V  93.8% (272/290)  IGHV5-10-1*01  275  ....G....A..........----------------------------------------------------------------------  294
                                        A  M  Y  Y  C  A  R                                                                       
D  92.9% (13/14)    IGHD6-19*01    5    -----------------------------...G..........-----------------------------------------------  18
J  97.9% (47/48)    IGHJ3*02       3    ---------------------------------------------------..........T............................  41

                                                 
                                        V  S  S  
                    Query_2123     367  TCTCTTCAG  375
J  97.9% (47/48)    IGHJ3*02       42   .........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_321322

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD6-19*01                                                                                           12.2    35    
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	TCGGCCTTACG	AGCAGAGGC	CTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATCGGCCTTACGAGCAGAGGCCTTTTTGACTTC	AIGLTSRGLFDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	277	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  V  S  C  K  G  S  G  F  S  F  S  S  Y
                    Query_2124   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGGTCTCCTGTAAGGGTTCTGGATTCAGCTTTAGCAGCTA  90
V  96.5% (277/287)  IGHV5-51*03  6    ....................................................A.....................A........C......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  G  V  D  S  E  T  R  Y  S  P
                    Query_2124   91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATGGTGTTGACTCTGAGACCAGATACAGCCC  180
V  96.5% (277/287)  IGHV5-51*03  96   C............................................................CC..G.........T..............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  L  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2124   181  GTCCCTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCAGACACCGC  270
V  96.5% (277/287)  IGHV5-51*03  186  ....T............................................................................G........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  I  G  L  T  S  R  G  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2124   271  CATGTATTACTGTGCGATCGGCCTTACGAGCAGAGGCCTTTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.5% (277/287)  IGHV5-51*03  276  .................------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-19*01  7    ----------------------------.....T...----------------------------------------------  15
J  97.7% (42/43)    IGHJ4*02     6    ----------------------------------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_224226

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           333     1e-93
IGHD3-9*01                                                                                            18.0    0.59 
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	CGAGATTC	ACTGGTTCTTAT	TCTGCAGTG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGCGAGATTCACTGGTTCTTATTCTGCAGTGGACTAC	TTARFTGSYSAVDY	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	105	9	0	92.1
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	234	21	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  Q  F  S  S  I  D  A  W  M  S  R  V  R  Q  A  P  G  K  G  L  
                    Query_2125   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTCAATTCAGTTCCATTGACGCCTGGATGAGCCGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.8% (234/255)  IGHV3-15*01  47   .......T............G........GG.....C..T..G.A..............T..............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  L  K  S  K  A  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  I  I  S  R  D  
                    Query_2125   91   AGTGGGTTGGCCGTCTGAAAAGCAAAGCTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCATCATCTCAAGAGATG  180
V  91.8% (234/255)  IGHV3-15*01  137  ..............A.T.........A................................................C..............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  L  N  T  L  H  L  Q  M  M  S  L  K  T  E  D  T  A  I  Y  Y  C  T  T  A  R  F  T  G  
                    Query_2125   181  ATTCACTAAACACGCTGCATCTGCAAATGATGAGCCTGAAAACCGAGGACACAGCCATATATTACTGCACCACAGCGAGATTCACTGGTT  270
V  91.8% (234/255)  IGHV3-15*01  227  .....AA..........T............AC........................G.G........T.......---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  91.7% (11/12)    IGHD3-9*01   17   -----------------------------------------------------------------------------------.......  23

                                      IMGT--------------->                                  
                                      S  Y  S  A  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2125   271  CTTATTCTGCAGTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  91.7% (11/12)    IGHD3-9*01   24   A....-------------------------------------------------  28
J  100.0% (40/40)   IGHJ4*02     9    --------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_321320

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           276     3e-76
IGHD3-10*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGCTTGAAATCCTC	TGGTTCGGAGAG	GGTAAAA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGCTTGAAATCCTCTGGTTCGGAGAGGGTAAAAACTACTTTGACTCC	AKPLEILWFGEGKNYFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	92	22	0	80.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	212	36	0	85.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  D  F  K  H  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2126   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCGACTTCAAGCACTATGGAATGCACTGGGTCCGCCAGGCTCCGGGCAAGGGGCTGG  90
V  85.5% (212/248)  IGHV3-30*18  47   .....................C.............AC.....GTAG......C.......................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  Y  E  G  S  K  K  V  Y  A  A  S  L  R  G  R  F  T  I  S  K  D  T  S  
                    Query_2126   91   AGTGGCTGGCGGTTATATCATATGAGGGAAGTAAAAAGGTCTACGCAGCCTCCTTGCGGGGCCGCTTCACCATCTCCAAAGACACCTCCG  180
V  85.5% (212/248)  IGHV3-30*18  137  .....G....A..............T........T..ATA...T....A....G..AA......A.............G.....AT...A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      E  N  T  L  Y  L  Q  V  S  S  L  T  A  E  D  T  A  V  Y  Y  C  A  K  P  L  E  I  L  W  F  
                    Query_2126   181  AGAACACACTCTATCTACAAGTGAGTAGCCTGACCGCCGAGGACACGGCTGTCTATTACTGTGCGAAACCGCTTGAAATCCTCTGGTTCG  270
V  85.5% (212/248)  IGHV3-30*18  227  .......G..G.....G...A...AC.......GA..T..............G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  91.7% (11/12)    IGHD3-10*01  10   -----------------------------------------------------------------------------------.......  16

                                      IMGT--------------------->                                  
                                      G  E  G  K  N  Y  F  D  S  W  G  R  G  T  L  V  S  V  S  S  
                    Query_2126   271  GAGAGGGTAAAAACTACTTTGACTCCTGGGGCCGGGGAACCCTGGTCTCCGTCTCCTCAG  330
D  91.7% (11/12)    IGHD3-10*01  17   .G...-------------------------------------------------------  21
J  93.8% (45/48)    IGHJ4*02     1    ------------............A........A.............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_321321

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           355     3e-100
IGHD6-25*01                                                                                           18.0    0.56  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAG	ATAGCAGCG	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCCAGATAGCAGCGCCCTTTGATTAC	TRGQIAAPFDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2127   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-33*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  S  D  G  N  N  K  Y  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2127   91   AGTGGGTGGCAGTTATTTGGTCTGATGGAAATAATAAATATTATGCAGCCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  95.6% (238/249)  IGHV3-33*01  137  ................A....A........G.........C.......A....................................T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  G  S  L  T  A  E  D  T  A  V  Y  Y  C  T  R  G  Q  I  A  A  P  F  
                    Query_2127   181  AGAACACGCTGTATCTGCAAATGGGCAGCCTGACAGCCGAGGACACGGCTGTGTATTACTGTACGAGAGGCCAGATAGCAGCGCCCTTTG  270
V  95.6% (238/249)  IGHV3-33*01  227  .......................AA........G............................G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-25*01  5    --------------------------------------------------------------------------.........-------  13
J  95.5% (42/44)    IGHJ4*02     5    -------------------------------------------------------------------------------------.....  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_2127   271  ATTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  309
J  95.5% (42/44)    IGHJ4*02     10   .C...................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_153862

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGGTGGACGCC	ARGHRVSNGWGTYYNYGVDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_2128   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_2128   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_2128   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  V  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_2128   271  TGGGGAACTTACTATAATTACGGGGTGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  89.6% (43/48)    IGHJ6*02     15   ------------------.....TA......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_153860

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           291     6e-81
IGHD3-10*01                                                                                           41.1    7e-08
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAC	TATTATTATGGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTATTATTATGGTTCGGGGAGTTATTTTGACTTC	ARGHYYYGSGSYFDF	250	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	33	33	27	0	6	81.8
CDR1-IMGT	34	63	30	26	4	0	86.7
FR2-IMGT	64	114	51	39	12	0	76.5
CDR2-IMGT	115	135	21	21	0	0	100
FR3-IMGT	136	249	114	103	11	0	90.4
CDR3-IMGT (germline)	250	256	7	7	0	0	100
Total	N/A	N/A	256	223	27	6	87.1


Alignments

                                      <-----------FR1-IMGT------------><----------CDR1-IMGT---------><--------------------FR2-IM
                                       T  L  S  L  T  C  T  V  T  F  S  R  G  S  I  S  S  G  G  S  Y  L  D  W  V  R  P  H  P  G 
                    Query_2129   1    ACCCTGTCCCTCACCTGCACTGTCACTTTCTCTCGTGGCTCCATTAGCAGTGGCGGTTCCTACTTGGACTGGGTCCGCCCGCACCCCGGG  90
V  87.1% (223/256)  IGHV4-31*03  49   ........................------...G..........C........T....A.....G.AG....A......A......A...  132
                                       T  L  S  L  T  C  T  V        S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       E  G  P  G  W  I  G  P  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  V  D 
                    Query_2129   91   GAGGGGCCGGGGTGGATTGGGCCCATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCCGGAGTCGACTTACCATATCAGTGGAC  180
V  87.1% (223/256)  IGHV4-31*03  133  A....C.T..A..........TA........................................AA.......G.............A...  222
                                       K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-----------------CDR
                                       T  S  K  N  Q  L  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  Y  Y  Y 
                    Query_2129   181  ACGTCTAAGAATCAATTGTCCCTGAGGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTATTGTGCGAGAGGCCACTATTATTAT  270
V  87.1% (223/256)  IGHV4-31*03  223  ...........C..G..C.......A......C..........................G.....C..........--------------  298
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  95.8% (23/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------------.....C...  10

                                      3-IMGT----------------->                                  
                                       G  S  G  S  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2129   271  GGTTCGGGGAGTTATTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.8% (23/24)    IGHD3-10*01  11   ...............-------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_224228

Length=411
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD6-13*01                                                                                           19.9    0.19  
IGHJ6*02                                                                                              114     2e-29 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TT	CAGCAGCTGG	CAAACCGGCTAACA	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCAGCAGCTGGCAAACCGGCTAACAATTACTACTACTACTACGGTCTGGACGTC	ARHSAAGKPANNYYYYYGLDV	290	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	111	3	0	97.4
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	285	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_2130   3    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  92
V  96.6% (285/295)  IGHV5-51*01  2    ....G...................................C.................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  L  P  G  K  G  L  E  W  M  G  F  I  Y  P  G  D  S  H  T  K  Y  
                    Query_2130   93   GTTACTGGATCGGCTGGGTGCGCCAGCTGCCCGGGAAAGGCCTGGAGTGGATGGGATTCATCTATCCTGGTGACTCTCATACCAAATACA  182
V  96.6% (285/295)  IGHV5-51*01  92   .C........................A............................GA....................G......G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  
                    Query_2130   183  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACA  272
V  96.6% (285/295)  IGHV5-51*01  182  ...........C...........................................................A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------------CDR3-IMGT-------------------------->          
                                      T  A  M  Y  Y  C  A  R  H  S  A  A  G  K  P  A  N  N  Y  Y  Y  Y  Y  G  L  D  V  W  G  Q  
                    Query_2130   273  CCGCCATGTATTACTGTGCGAGACATTCAGCAGCTGGCAAACCGGCTAACAATTACTACTACTACTACGGTCTGGACGTCTGGGGCCAAG  362
V  96.6% (285/295)  IGHV5-51*01  272  .........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-13*01  9    ---------------------------..........-----------------------------------------------------  18
J  98.4% (61/62)    IGHJ6*02     1    ---------------------------------------------------....................A..................  39

                                                             
                                      G  T  T  V  T  V  S  S 
                    Query_2130   363  GGACCACGGTCACCGTCTCCTCA  385
J  98.4% (61/62)    IGHJ6*02     40   .......................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40288536


Query= Query_153866

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_2131   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.0% (222/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  N  R  V  T  I  S  A  D  T  S  K  N 
                    Query_2131   91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAATCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.0% (222/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C...................G.................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_2131   181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.0% (222/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_2131   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_321328

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     3e-93
IGHD3-22*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACCCGTATCCC	AGTGGTT	TTTCACCCCTTGCCTCCG	GGGGC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2132   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  T  
                    Query_2132   91   AGTGGGTCTCAGCGATTACTGGGAGTGGTAGTAGTACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTACACCA  180
V  92.4% (231/250)  IGHV3-23*01  137  .............T....G...T......G....C.........G......................................A.TT...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT---------------------------------------------------->                            
                                      K  N  T  L  Y  L  L  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  A  K  D  N  P  Y  P  S  G  
                    Query_2132   181  AGAACACGCTGTATCTGCTAATGAACAGCCTTACAGCCGAGGACACGGCCGTCTATTACTGTGCGAAGGATAACCCGTATCCCAGTGGTT  270
V  92.4% (231/250)  IGHV3-23*01  227  ..................A............G.G..................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                                                                         
                                      F  S  P  L  A  S  G  G  R  G  P  L  V  T  V  S  S  
                    Query_2132   271  TTTCACCCCTTGCCTCCGGGGGCCGGGGACCCCTGGTCACCGTCTCCTCAG  321
J  93.9% (31/33)    IGHJ4*02     16   ------------------......A....A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_82885

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           371     7e-105
IGHD3-22*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTACATCAG	TATGATA	ATTTCT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTACATCAGTATGATAATTTCTTAC	ARGHYISMIISY	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	71	4	0	94.7
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	97	17	0	85.1
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	266	29	0	90.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_2133   2    CAGATGCAGCTGGTGCAGTCTGGAGCCGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCGTCTGGATACACCTTCACC  91
V  90.2% (266/295)  IGHV1-46*01  1    ...G...................G..T............................................A..................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       A  Y  Y  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  S  D  P  S  G  G  N  T  R  S 
                    Query_2133   92   GCCTACTATATCCACTGGGTGCGCCAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAAGCGACCCTAGTGGAGGTAACACAAGGTCT  181
V  90.2% (266/295)  IGHV1-46*01  91   AG.........G...........A.....................................T.A..........T....G......C.AC  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  P  K  F  Q  G  R  F  T  M  T  T  E  S  S  T  S  T  V  Y  M  Q  L  S  N  L  R  S  E  D 
                    Query_2133   182  GCACCGAAGTTCCAGGGCAGGTTCACCATGACTACGGAGTCGTCCACCAGCACAGTCTATATGCAACTGAGCAACCTGAGATCTGAGGAC  271
V  90.2% (266/295)  IGHV1-46*01  181  ....A...............AG..........C.G...CA.......G...........C...G.G.......G................  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  V  Y  Y  C  A  R  G  H  Y  I  S  M  I  I  S  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_2133   272  ACCGCCGTTTATTACTGTGCGAGAGGCCACTACATCAGTATGATAATTTCTTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  359
V  90.2% (266/295)  IGHV1-46*01  271  ..G.....G................---------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                 
D  100.0% (7/7)     IGHD3-22*01  8    --------------------------------------.......-------------------------------------------  14
J  97.3% (36/37)    IGHJ4*02     12   ---------------------------------------------------...............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_110009

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           335     4e-94
IGHD6-19*01                                                                                           12.2    32   
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-19*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCTTG	GCACTGGCT	CCTCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATCGCTTGGCACTGGCTCCTCGTGCTTTCGATGTC	TRDRLALAPRAFDV	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	235	21	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  G  D  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2134   1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCAATTTTGGTGATTATGCTATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  91.8% (235/256)  IGHV3-49*04  47   ....................................CC...................G.....................G..........  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  L  G  F  I  R  T  T  A  Y  G  A  T  T  E  Y  A  A  S  V  E  D  R  L  T  I  S  R  D  
                    Query_2134   91   AGTGGTTAGGTTTCATAAGAACAACAGCTTATGGTGCGACAACAGAGTACGCCGCGTCTGTGGAGGACAGACTAACCATCTCAAGAGATG  180
V  91.8% (235/256)  IGHV3-49*04  137  .....G..........T....GC.A...........G.........A...............A.A.G....T.C................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  T  R  D  R  L  A  L  
                    Query_2134   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAGAGTGAAGACACAGCCGTGTATTATTGTACTAGAGATCGCTTGGCACTGG  270
V  91.8% (235/256)  IGHV3-49*04  227  ........................................A.CC..G.................C...........--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  88.9% (8/9)      IGHD6-19*01  8    -----------------------------------------------------------------------------------...G...  14

                                      IMGT--------------->                                  
                                      A  P  R  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2134   271  CTCCTCGTGCTTTCGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
D  88.9% (8/9)      IGHD6-19*01  15   ..----------------------------------------------------  16
J  97.9% (46/47)    IGHJ3*01     4    -------......T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_82887

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           431     4e-123
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTC	ARHGDDSGGYLYYLYGMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	69	2	0	97.2
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	111	3	0	97.4
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	292	284	8	0	97.3


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  T  
                    Query_2135   7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCACCT  96
V  97.3% (284/292)  IGHV5-51*01  5    ...............................A...................A...................................G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  T  R  Y  S  
                    Query_2135   97   ACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATACCAGATACAGCC  186
V  97.3% (284/292)  IGHV5-51*01  95   .........G.................................................T..............................  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_2135   187  CGTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCG  276
V  97.3% (284/292)  IGHV5-51*01  185  ........C...................A.C...........................................................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------------CDR3-IMGT----------------------->                   
                                      A  M  Y  Y  C  A  R  H  G  D  D  S  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  
                    Query_2135   277  CCATGTATTACTGTGCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTCTGGGGCCAAGGGACCACGG  366
V  97.3% (284/292)  IGHV5-51*01  275  ......................--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  92.9% (13/14)    IGHD1-26*01  4    ------------------------------........A.....----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    -----------------------------------------------.......AC.....T............................  48

                                                    
                                      V  T  V  S  S 
                    Query_2135   367  TCACCGTCTCCTCA  380
J  94.7% (54/57)    IGHJ6*02     49   ..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_308810

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           344     7e-97
IGHD2-2*01                                                                                            23.8    0.012
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCGA	CCGA	GATATTGTAATGAAACCAGCTGCT	GTCCGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCGCCGACCGAGATATTGTAATGAAACCAGCTGCTGTCCGGGACTACTTCAACGGTATGGACGTC	TADRDIVMKPAAVRDYFNGMDV	249	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	256	8	6	2	0	75
Total	N/A	N/A	256	238	18	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  N  N  A  W  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_2136   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCATTTTCAATAACGCCTGGCTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.0% (238/256)  IGHV3-15*01  47   .......T....................T.......C.....G..........A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  S  D  S  G  T  T  D  Y  A  A  P  V  K  G  R  F  I  I  S  R  E  
                    Query_2136   91   AGTGGGTTGGCCGTATTAAAAGCAAAAGTGATAGCGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCATCATCTCAAGAGAGG  180
V  93.0% (238/256)  IGHV3-15*01  137  ...........................C....G.T........................................C............T.  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  Q  N  T  V  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  T  A  D  R  D  I  V  
                    Query_2136   181  ATTCACAAAACACAGTGTATCTGCAAATGAACAGCCTGAAAAGCGAGGACACAGCCGTGTATTATTGTACCGCCGACCGAGATATTGTAA  270
V  93.0% (238/256)  IGHV3-15*01  227  .....A.......GC...........................C.....................C......A.A..--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  83.3% (20/24)    IGHD2-2*01   3    --------------------------------------------------------------------------------.........G  12

                                      -------CDR3-IMGT--------------------------->                                 
                                      M  K  P  A  A  V  R  D  Y  F  N  G  M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_2136   271  TGAAACCAGCTGCTGTCCGGGACTACTTCAACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  347
D  83.3% (20/24)    IGHD2-2*01   13   .AGT..........---------------------------------------------------------------  26
J  94.6% (53/56)    IGHJ6*02     7    ---------------------......A.T....................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_308813

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           311     4e-87
IGHD3-10*01                                                                                           10.3    120  
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGG	CGGGG	GCTCGGCCGGGGCC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGCGGGGGCTCGGCCGGGGCCTTTGATATC	AREGGGSAGAFDI	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	225	26	0	89.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  G  Y  Y  F  W  S  W  V  R  Q  H  P  G  K  G 
                    Query_2137   1    ACCCTGTCCCTCACCTGCACTGTCTCAGGTGACTCCATCAGCAGTGGTTATTACTTTTGGAGTTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  89.6% (225/251)  IGHV4-31*03  49   ..........................T....G................GG.....AC.....C...A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  M  H  H  S  G  S  S  F  Y  S  A  S  L  K  S  R  I  A  M  S  V  D  T  S 
                    Query_2137   91   CTGGAGTGGATTGGGTACATGCATCACAGTGGAAGCAGCTTCTACAGCGCGTCCCTCAAGAGTCGAATTGCCATGTCAGTGGACACCTCT  180
V  89.6% (225/251)  IGHV4-31*03  139  ....................CT..T.......G....C..A.....A.C.................G..A....A.....A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  T  G  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  G  S  A  G 
                    Query_2137   181  AAGAACCAGTTCTCCCTGAAGCTGACTGGTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGAGGGCGGGGGCTCGGCCGGG  270
V  89.6% (225/251)  IGHV4-31*03  229  .........................GCTC......T...................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  15   --------------------------------------------------------------------------.....-----------  19

                                      ----------->                                  
                                       A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2137   271  GCCTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  316
J  100.0% (43/43)   IGHJ3*02     8    ---...........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_195505

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           353     1e-99
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AACCCCGCAAT	GTATTACTATGATGATAGTGG	ATCCAGGCCCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAACCCCGCAATGTATTACTATGATGATAGTGGATCCAGGCCCTACTACTCTGACTAC	AKNPAMYYYDDSGSRPYYSDY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  R  G  L  
                    Query_2138   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  95.6% (237/248)  IGHV3-23*01  47   .............................................G...................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  L  T  G  G  G  G  S  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  H  N  S  
                    Query_2138   91   AGTGGGTCTCAGGTCTTACTGGTGGAGGTGGTAGTACATACTACACAGACTCCGTGAAGGGCCGGTTCACCATCTCGAGACACAATTCCA  180
V  95.6% (237/248)  IGHV3-23*01  137  ............C.A...G....A.T........C.........G...............................C...G.........  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  N  P  A  M  Y  Y  Y  
                    Query_2138   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAAACCCCGCAATGTATTACTATG  270
V  95.6% (237/248)  IGHV3-23*01  227  ....................................................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.5% (19/21)    IGHD3-22*01  1    -------------------------------------------------------------------------------...........  11

                                      DR3-IMGT-------------------------->                                  
                                      D  D  S  G  S  R  P  Y  Y  S  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_2138   271  ATGATAGTGGATCCAGGCCCTACTACTCTGACTACTGGGGCCAGGGAATTCTGGTCACCGTCTCCTCAG  339
D  90.5% (19/21)    IGHD3-22*01  12   ..AG......-----------------------------------------------------------  21
J  93.8% (45/48)    IGHJ4*02     1    ---------------------......T....................CC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_63255

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2139   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.2% (241/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2139   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTATAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.2% (241/248)  IGHV4-31*03  139  .....G.........T.C..........................C.............................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_2139   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.2% (241/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2139   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_63256

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  P  L  T  C  S  V  S  G  G  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2140   1    ACCCTGCCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ......T............C.....................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_2140   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_2140   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  97.6% (244/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2140   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_63257

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*04                                                                                           408     4e-116
IGHD3-3*01                                                                                            33.4    2e-05 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*04	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCCCTAAGTG	ATTACGATTTTTGGAGT	TCGGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCCCTAAGTGATTACGATTTTTGGAGTTCGGGCTGGTTCGACCCC	AKPLSDYDFWSSGWFDP	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	68	6	0	91.9
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	112	2	0	98.2
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	277	16	0	94.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  T  C  A  A  S  G  F  T  F  T  
                    Query_2141   2    AGATGCAGCTGGTGCAGTCTGGAGGAGGCCTGGTACAGCCGGGGGGGTCCCTGAGACTCACCTGTGCAGCCTCTGGATTCACCTTTACCG  91
V  94.5% (277/293)  IGHV3-23*04  2    ..G...........G.......G......T..........T..................T...........................G.A  91
                                         V  Q  L  V  E  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  S  G  S  G  G  V  T  N  Y  
                    Query_2141   92   ACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGGAGTGGGTCTCAGGTATTAGTGGTAGCGGTGGTGTCACAAACTACG  181
V  94.5% (277/293)  IGHV3-23*04  92   G.................................G......................C............T......AG....T......  181
                                      S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  
                    Query_2141   182  CAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACA  271
V  94.5% (277/293)  IGHV3-23*04  182  ..........................................................................................  271
                                      A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  L  Y  Y  C  A  K  P  L  S  D  Y  D  F  W  S  S  G  W  F  D  P  W  G  R  G  T  L  V  
                    Query_2141   272  CGGCCTTATATTACTGTGCGAAACCCCTAAGTGATTACGATTTTTGGAGTTCGGGCTGGTTCGACCCCTGGGGCCGGGGAACCCTGGTCA  361
V  94.5% (277/293)  IGHV3-23*04  272  .....G.................-------------------------------------------------------------------  294
                                      T  A  V  Y  Y  C  A  K                                                                    
D  100.0% (17/17)   IGHD3-3*01   3    ---------------------------------.................----------------------------------------  19
J  97.9% (46/47)    IGHJ5*02     5    -------------------------------------------------------....................A..............  39

                                                  
                                      T  V  S  S  
                    Query_2141   362  CCGTCTCCTCAG  373
J  97.9% (46/47)    IGHJ5*02     40   ............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_63250

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     6e-96
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ2*01                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTTGGGCAGTATC	CTATGGTTCGGGGAGTTA	GGTTCGC	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACTTGGGCAGTATCCTATGGTTCGGGGAGTTAGGTTCGCGGTACTTCGATCTC	AKDLGSILWFGELGSRYFDL	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  Y  A  M  D  W  V  R  Q  P  P  G  K  G  L  
                    Query_2142   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACTATGCCATGGACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ..........................................G..G..........AG.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  R  G  D  N  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2142   91   AGTGGGTCTCAGCAATTAGTGGTCGTGGTGATAACACATTTTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  .............T.........A......G..G.....AC.................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  S  T  L  Y  L  Q  V  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  L  G  S  I  L  W  
                    Query_2142   181  AGAGTACGCTGTATCTGCAAGTGGACAGCCTGAGAGCCGAAGACACGGCCGTATATTACTGTGCGAAAGACTTGGGCAGTATCCTATGGT  270
V  93.6% (234/250)  IGHV3-23*01  227  ...AC...............A..A................G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (18/18)   IGHD3-10*01  7    -----------------------------------------------------------------------------------.......  13

                                      R3-IMGT------------------------>                                  
                                      F  G  E  L  G  S  R  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2142   271  TCGGGGAGTTAGGTTCGCGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  336
D  100.0% (18/18)   IGHD3-10*01  14   ...........-------------------------------------------------------  24
J  100.0% (48/48)   IGHJ2*01     6    ------------------................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_63252

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           353     9e-100
IGHD5-18*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGCCATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGCCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	114	0	0	100
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	234	8	0	96.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  R  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E  
                    Query_2143   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGGAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAAAGACTGGAGT  93
V  96.7% (234/242)  IGHV4-59*01  50   .....TCC...A....C.......................T......................................GG.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_2143   94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  96.7% (234/242)  IGHV4-59*01  140  ..........................................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D  
                    Query_2143   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGCCATGGTTACGGAGGAGTTGACT  273
V  96.7% (234/242)  IGHV4-59*01  230  ..............................................................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  93.3% (14/15)    IGHD5-18*01  6    --------------------------------------------------------------......T........-------------  20
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------------------------------------------......  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2143   274  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (42/42)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_63253

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     1e-109
IGHD6-25*01                                                                                           14.1    9.4   
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAACTACGGTATGGACGTC	ARQSSAGRTNYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	269	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  R  S  S  G  Y  D  F  L  D  Y
                    Query_2144   1    GCAGCTGGTGCAGTCTGGAGCAGAGCTAAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGAGTTCTGGGTACGACTTTCTCGACTA  90
V  92.4% (269/291)  IGHV5-51*01  6    .........................G.G..A.....C.........................A.G.......A...AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_2144   91   CTGGATCGTCTGGGTGCGCCAAATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGTCC  180
V  92.4% (269/291)  IGHV5-51*01  96   ........G............G..........................................................G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  A
                    Query_2144   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGCGCAGTCTGAAGGCCTCGGACACCGC  270
V  92.4% (269/291)  IGHV5-51*01  186  .............................C...............C..................A....C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  Y  C  A  R  Q  S  S  A  G  R  T  N  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_2144   271  CAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  360
V  92.4% (269/291)  IGHV5-51*01  276  ..T..................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  100.0% (50/50)   IGHJ6*02     13   -----------------------------------------.................................................  61

                                       
                                       
                    Query_2144   361  A  361
J  100.0% (50/50)   IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_63258

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           269     2e-74
IGHD3-3*01                                                                                            18.0    0.57 
IGHJ4*01                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGCA	N/A	TTATTATAC	GGGGACCTATCCAC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATTATTATACGGGGACCTATCCACTTGACCAC	ARHYYTGTYPLDH	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	10	11	0	47.6
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	208	36	0	85.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  G  Y  S  W  S  W  I  R  Q  F  P  G  K  G  L  E  
                    Query_2145   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCAGTGGTTACTCCTGGAGTTGGATCCGGCAGTTCCCAGGGAAGGGACTGGAGT  93
V  85.2% (208/244)  IGHV4-59*08  50   .....TCC...A..................G..........A......A......C............CC....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  R  A  H  D  M  K  T  N  Y  N  P  S  L  K  N  R  L  T  I  S  V  D  T  S  R  S  
                    Query_2145   94   GGATTGGATATAGGGCTCACGATATGAAGACCAACTACAACCCCTCCCTCAAGAATCGACTCACCATATCAGTGGACACGTCCAGGAGCC  183
V  85.2% (208/244)  IGHV4-59*08  140  .......G....TCTA.T..AG.GG..GC.........................G....G.............A..........A..A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  V  A  L  E  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  H  Y  Y  T  G  T  Y  P  L  
                    Query_2145   184  AGGTCGCCCTGGAGTTGACCTCTGTGACCGCCGCAGACACGGCCATATATTATTGTGCGAGGCATTATTATACGGGGACCTATCCACTTG  273
V  85.2% (208/244)  IGHV4-59*08  230  ..T..T.....A..C...G.........................G.G.....C........A..--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (9/9)     IGHD3-3*01   22   ----------------------------------------------------------------.........-----------------  30
J  92.5% (37/40)    IGHJ4*01     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                
                                      D  H  W  G  H  G  I  L  V  T  V  S  S
                    Query_2145   274  ACCACTGGGGCCACGGAATCCTGGTCACCGTCTCCTC  310
J  92.5% (37/40)    IGHJ4*01     10   ..T..........A....C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_110007

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            347     7e-98
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTCAGATGGCGATTTTG	GCACTGGCTGGTAC	GGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACTCAGATGGCGATTTTGGCACTGGCTGGTACGGGGGTTTTGACGAC	AKDSDGDFGTGWYGGFDD	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  E  H  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2146   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCGAAGAGCATGCCATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGCCTGG  90
V  94.4% (236/250)  IGHV3-9*01   47   ........................................T..T..TT...................G......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  T  I  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2146   91   AGTGGGTCTCAGGTATTAGTTGGAATAGCGGAACCATAAAGTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-9*01   137  ............................T..T.G....GGC.................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  K  D  S  D  G  D  F  G  
                    Query_2146   181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGAGACCTGAGGACACGGCCTTATATTACTGTGCAAAAGACTCAGATGGCGATTTTGGCA  270
V  94.4% (236/250)  IGHV3-9*01   227  ..........G........................G................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD6-19*01  8    ---------------------------------------------------------------------------------------...  10

                                      IMGT--------------------->                                  
                                      T  G  W  Y  G  G  F  D  D  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_2146   271  CTGGCTGGTACGGGGGTTTTGACGACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  330
D  92.9% (13/14)    IGHD6-19*01  11   G..........-------------------------------------------------  21
J  95.3% (41/43)    IGHJ4*02     6    -----------------......T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_23408

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           388     4e-110
IGHD6-13*01                                                                                           18.0    0.57  
IGHJ5*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGTGG	GCAGCAGCT	ACA	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGTGGGCAGCAGCTACACGACCAC	AKDRGQQLHDH	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	249	1	0	99.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2147   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.6% (249/250)  IGHV3-23*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2147   91   AGTGGGTCTCAGGTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  99.6% (249/250)  IGHV3-23*01  137  ............C.............................................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  R  G  Q  Q  L  H  
                    Query_2147   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCGTGGGCAGCAGCTACACG  270
V  99.6% (249/250)  IGHV3-23*01  227  ......................................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD6-13*01  8    ----------------------------------------------------------------------------.........-----  16
J  97.6% (40/41)    IGHJ5*02     11   ----------------------------------------------------------------------------------------..  12

                                      ---->                                  
                                      D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2147   271  ACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.6% (40/41)    IGHJ5*02     13   ...C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_156339

Length=411
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           389     2e-110
IGHD3-3*01                                                                                            46.8    1e-09 
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGAGCTTGAC	TTACGATTTTTGGAGTGGTTATTA	CCCGACC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGAGCTTGACTTACGATTTTTGGAGTGGTTATTACCCGACCACTACTACTACGCTATGGACGTC	ARGELDLRFLEWLLPDHYYYAMDV	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  T  H 
                    Query_2148   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTTCCACTCAC  91
V  93.1% (269/289)  IGHV1-18*04  7    .................................................................................A...GCT..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  K  K  S  I  T  K  Y  A  Q 
                    Query_2148   92   GGTATTAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGCTAAGAAAAGTATCACAAAGTATGCACAG  181
V  93.1% (269/289)  IGHV1-18*04  97   .....C.............................G...........................T.C..TG...A......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  R  D  R  V  T  M  T  T  D  T  S  T  T  T  V  Y  M  E  L  R  S  L  R  S  D  D  A  A 
                    Query_2148   182  AAGTTCCGAGACAGAGTCACCATGACCACAGACACATCCACGACCACAGTCTACATGGAACTGAGGAGCCTGAGATCTGACGACGCGGCC  271
V  93.1% (269/289)  IGHV1-18*04  187  ...C...AG.G................................G.....C.........G........................A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------------CDR3-IMGT------------------------------>      
                                       V  Y  Y  C  A  R  G  E  L  D  L  R  F  L  E  W  L  L  P  D  H  Y  Y  Y  A  M  D  V  W  G 
                    Query_2148   272  GTGTATTACTGTGCGAGAGGGGAGCTTGACTTACGATTTTTGGAGTGGTTATTACCCGACCACTACTACTACGCTATGGACGTCTGGGGC  361
V  93.1% (269/289)  IGHV1-18*04  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (24/24)   IGHD3-3*01   4    ------------------------------........................------------------------------------  27
J  98.2% (55/56)    IGHJ6*02     7    -------------------------------------------------------------............G................  35

                                                                 
                                       Q  G  T  T  V  T  V  S  S 
                    Query_2148   362  CAAGGGACCACGGTCACCGTCTCCTCA  388
J  98.2% (55/56)    IGHJ6*02     36   ...........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40288536


Query= Query_156338

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           371     7e-105
IGHD5-12*01                                                                                           37.2    1e-06 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGCAAAGCAAGGAA	GGATATAGTGGCTACGATT	C	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGCAAAGCAAGGAAGGATATAGTGGCTACGATTCCTACTACGGTATGGACGTC	ARVQSKEGYSGYDSYYGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	243	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2149   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGCTTCAGTACTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.6% (243/249)  IGHV3-33*01  47   ....................................C........GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  D  R  F  T  I  S  R  D  N  S  
                    Query_2149   91   AGTGGGTGTCAGTTATATGGTATGATGGAAGTAATAAATATTATGCAGACTCCGTGAAGGACCGATTCACCATCTCCAGAGACAATTCCA  180
V  97.6% (243/249)  IGHV3-33*01  137  ........G...............................C...................G.............................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  Q  S  K  E  G  Y  
                    Query_2149   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGTGCAAAGCAAGGAAGGATATA  270
V  97.6% (243/249)  IGHV3-33*01  227  .....................................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (19/19)   IGHD5-12*01  3    -----------------------------------------------------------------------------------.......  9

                                      R3-IMGT------------------------>                                 
                                      S  G  Y  D  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2149   271  GTGGCTACGATTCCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  100.0% (19/19)   IGHD5-12*01  10   ............-----------------------------------------------------  21
J  100.0% (52/52)   IGHJ6*02     11   -------------....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_156335

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD3-10*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGCGA	CCGCGGTACGACCAGG	ATGTTCG	AGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGACCGCGGTACGACCAGGATGTTCGAGAATGCTCTTGAGATC	AGDRGTTRMFENALEI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	45	6	0	88.2
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	98	16	0	86
CDR3-IMGT (germline)	241	248	8	6	2	0	75
Total	N/A	N/A	248	215	33	0	86.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  G  V  S  G  G  A  I  S  S  S  H  W  W  N  W  V  R  Q  A  P  G  K  G  L 
                    Query_2150   1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGCGGCGCCATTAGCAGCAGTCACTGGTGGAATTGGGTCCGCCAGGCCCCCGGAAAGGGACTG  90
V  86.7% (215/248)  IGHV4-4*01   49   ...................C.........T...T....C.....T...A.........G.............C....A..G.....G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  Q  I  Y  P  G  G  S  A  N  Y  N  P  S  L  R  S  R  V  A  I  S  L  D  A  S  K 
                    Query_2150   91   GAGTGGATTGGGCAAATCTATCCTGGTGGGAGCGCCAACTACAATCCGTCCCTCAGGAGTCGAGTCGCCATTTCGTTAGACGCGTCCAAG  180
V  86.7% (215/248)  IGHV4-4*01   139  ............G.........A.A........A..........C..........A..........A....A..AG.....AA.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       S  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  G  D  R  G  T  T  R  M  F 
                    Query_2150   181  AGCCAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCTGACACGGCCGTCTATTTTTGTGCGGGCGACCGCGGTACGACCAGGATGTTC  270
V  86.7% (215/248)  IGHV4-4*01   229  .A..............A.C...G...............G...........G....GC......A.A..----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (7/7)     IGHD3-10*02  9    ------------------------------------------------------------------------------------......  14

                                      ----------------->                                  
                                       E  N  A  L  E  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2150   271  GAGAATGCTCTTGAGATCTGGGGTCAAGGGACAATGGTCACCGTTTCCTCAG  322
D  100.0% (7/7)     IGHD3-10*02  15   .---------------------------------------------------  15
J  89.6% (43/48)    IGHJ3*02     3    ----.....T....T........C....................C..T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_156334

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           325     3e-91
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGCG	GGCTGG	G	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCTGGGAACTGGTTCGACCCC	ARGRRAGNWFDP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  V  P  G  K  G 
                    Query_2151   1    ACCCTGTCCCTCACCTGCAGTGTCTCAGGTGGCTCCATCAGTAGTGGGGCTTACTACTGGAGTTGGATCCGCCAGGTCCCAGGGAAGGGC  90
V  91.6% (229/250)  IGHV4-31*01  49   ...................C......T..............C.....T.G............C............CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  E  N  T  Q  Y  N  P  S  L  K  S  L  V  T  I  S  G  D  T  S 
                    Query_2151   91   CTGGAGTGGATTGGATACATCTATTACGGTGAGAATACCCAGTACAACCCGTCCCTCAAGAGTCTGGTTACCATATCAGGAGACACCTCT  180
V  91.6% (229/250)  IGHV4-31*01  139  ..............G............A...G..GC...T.C.......................A.............T......G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       T  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  W 
                    Query_2151   181  ACGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCTGGGAACTGG  270
V  91.6% (229/250)  IGHV4-31*01  229  .A.................A.................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------......-------  18
J  93.9% (46/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  D  P  W  G  H  G  I  L  V  T  V  T  S  
                    Query_2151   271  TTCGACCCCTGGGGCCACGGAATCCTGGTCACCGTCACCTCAG  313
J  93.9% (46/49)    IGHJ5*02     9    .................G....C.............T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_156337

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           358     4e-101
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCACCCAA	TATGGTTCGGAGAGT	CTG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCACCCAATATGGTTCGGAGAGTCTG	ARATQYGSESL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	259	30	0	89.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_2152   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACTTCCTAT  91
V  89.6% (259/289)  IGHV1-18*01  7    .................................................A.................................CAG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  S  W  V  R  Q  A  P  G  G  G  L  E  W  M  G  W  S  G  P  N  N  D  D  A  H  Y  G  H 
                    Query_2152   92   GGTGTCAGCTGGGTGCGCCAGGCCCCTGGAGGAGGGCTTGAATGGATGGGATGGAGCGGCCCTAACAATGATGACGCACACTATGGACAT  181
V  89.6% (259/289)  IGHV1-18*01  97   ...A.............A............CA.........G.............T.A..G..T......G.A..A..A......C...G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  L  R  G  R  V  T  I  T  T  D  T  S  T  T  T  S  F  M  E  L  R  S  L  R  S  A  D  T  A 
                    Query_2152   182  AGCCTCCGGGGCAGAGTCACCATTACCACAGACACATCAACGACCACATCCTTCATGGAGTTGAGGAGCCTGAGATCTGCCGACACGGCC  271
V  89.6% (259/289)  IGHV1-18*01  187  .AG....A...............G..............C....G....G...A.......C..................A..........  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  A  T  Q  Y  G  S  E  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2152   272  GTATATTACTGTGCGAGAGCCACCCAATATGGTTCGGAGAGTCTGTGGGGCCAGGGAACCCTGGTCACAGTCTCCTCAG  350
V  89.6% (259/289)  IGHV1-18*01  277  ..G................------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                              
D  93.3% (14/15)    IGHD3-10*01  8    ---------------------------..........G....-------------------------------------  22
J  97.1% (33/34)    IGHJ4*02     15   ---------------------------------------------.......................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_156336

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            333     1e-93
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCAGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCAGAAGTACGGTGTCTTCGGTTTGGACGTC	AGQKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_2153   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.8% (228/243)  IGHV4-4*02   49   ...................C........................T..T..........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  R  S  E 
                    Query_2153   91   GAGTGGATTGGGGAGATCTCTCTTAGTGGGAGCACCAGCTACAACCCATCCCTCAAGTCTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  93.8% (228/243)  IGHV4-4*02   139  ..............A....A..A..............A.........G.........AG............A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  M  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  Q  K  Y  G  V  F  G  L 
                    Query_2153   181  AACCAGTTCTCCCTGATGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCAGAAGTACGGTGTCTTCGGTTTG  270
V  93.8% (228/243)  IGHV4-4*02   229  ................A.....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2153   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_156331

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD2-21*02                                                                                           10.3    115  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GG	GACTG	ACCCACTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGACTGACCCACTCCTACTTTGAGTCC	ARGLTHSYFES	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  N  N  Y  Y  W  N  W  I  R  H  P  P  G  K  G  L  E 
                    Query_2154   1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAATAATTACTACTGGAACTGGATCCGGCACCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ...........................G............G..G...........G............G.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  R  N 
                    Query_2154   91   TGGATTGGGTACGTCTATTACAGCGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAGGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ...........TA..........T....G........................................................A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  G  L  T  H  S  Y  F  E  S 
                    Query_2154   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCTCTGCGGACACGGCCGTGTATTACTGTGCGAGGGGACTGACCCACTCCTACTTTGAGTCC  270
V  95.5% (231/242)  IGHV4-59*01  229  ..............................G...............................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD2-21*02  17   ----------------------------------------------------------------.....---------------------  21
J  95.7% (45/47)    IGHJ4*02     2    -----------------------------------------------------------------------------.........C.A.  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2154   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  95.7% (45/47)    IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_156330

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD6-25*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTC	ARQSSAGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  S  S  G  Y  D  F  L  D  Y
                    Query_2155   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGAGTTCTGGATACGACTTTCTCGACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ..............................A.....C...........................G...........AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_2155   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G.......................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2155   181  GTCATTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGAACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  ...C.........................................C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  M  V  T  V  S  S
                    Query_2155   271  CAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTC  360
V  95.2% (277/291)  IGHV5-51*01  276  ..T..................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------...............................C...............  61

                                       
                                       
                    Query_2155   361  A  361
J  97.9% (47/48)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_156333

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           244     7e-67
IGHD3-16*02                                                                                           25.7    0.003
IGHJ3*01                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GTCTTCTTATCGAAGACCCCACGTATT	TTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTTCTTATCGAAGACCCCACGTATTTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYFWGSFRRNHDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	89	25	0	78.1
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	200	44	0	82


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_2156   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  82.0% (200/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  I  L  P  T  G  S  T  H  Y  N  P  S  V  R  S  P  V  T  L  S  G  D  M  P  T  N 
                    Query_2156   91   TGGCTTGGCTTCATCTTACCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCCTGTCACCCTGTCAGGAGACATGCCTACGAAT  180
V  82.0% (200/244)  IGHV4-59*01  139  ...A....G.AT....ATTA..G..........A..............C...A.....GA......A.A....T.....C.T.C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       H  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  *  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_2156   181  CACTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATAATTCTGTGCAAGAGGTCTTCTTATCGAAGACCCCACGTAT  270
V  82.0% (200/244)  IGHV4-59*01  229  ..G..C.....G..G....G.TC......................GTG..T.A......G....--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       F  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  P  V  S  S  
                    Query_2156   271  TTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCCCCGTCTCTTCAG  346
D  93.8% (15/16)    IGHD3-16*02  15   -............A...-----------------------------------------------------------  30
J  90.7% (39/43)    IGHJ3*01     8    ---------------------------------...G....................AT....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_156332

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-24*01                                                                                           425     3e-121
IGHD6-13*01                                                                                           16.1    2.5   
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-24*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	CACG	ATAGGAGCAGC	CCCCTG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACAGACACGATAGGAGCAGCCCCCTGCTACTATTACGGCATGGACGTC	ATDTIGAAPCYYYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	281	9	0	96.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T  E  L 
                    Query_2157   2    CAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTA  91
V  96.9% (281/290)  IGHV1-24*01  7    ........A.................................................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T  E  L 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  S  F  H  P  E  D  G  E  T  I  Y  A  Q 
                    Query_2157   92   TCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAAGTTTTCATCCTGAAGATGGTGAGACAATCTACGCACAG  181
V  96.9% (281/290)  IGHV1-24*01  97   ...................................................G.....G................A...............  186
                                       S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  I  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  L  T  M  T  E  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 
                    Query_2157   182  AAATTCCAGGGCAGACTCACCATGACCGAGGACACATCTACAGACACAGCCTACATGGAACTGAGCAGCCTGAGATCTGAAGACACGGCC  271
V  96.9% (281/290)  IGHV1-24*01  187  ..G............G...........................................G....................G.........  276
                                       K  F  Q  G  R  V  T  M  T  E  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><--------------------CDR3-IMGT-------------------->                           
                                       V  Y  Y  C  A  T  D  T  I  G  A  A  P  C  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_2157   272  GTATATTACTGTGCAACAGACACGATAGGAGCAGCCCCCTGCTACTATTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  361
V  96.9% (281/290)  IGHV1-24*01  277  ..G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  T                                                                         
D  90.9% (10/11)    IGHD6-13*01  5    ------------------------....C......-------------------------------------------------------  15
J  96.4% (53/55)    IGHJ6*02     8    -----------------------------------------......C.....T....................................  56

                                            
                                       S  S 
                    Query_2157   362  TCCTCA  367
J  96.4% (53/55)    IGHJ6*02     57   ......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_76793

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           311     4e-87
IGHD1-26*01                                                                                           10.3    120  
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCGCAGAGAGAGGAAGGCC	TGGGA	C	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCGCAGAGAGAGGAAGGCCTGGGACCTGGTTCGACCCC	ARAAERGRPGTWFDP	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	220	21	0	91.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  G  S  I  S  S  Y  Y  W  H  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_2158   4    CCCTGAGACTCTCCTGCAGTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGCACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  91.3% (220/241)  IGHV4-59*08  50   .....TCC...A......C..................................AG...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  V  T  D  S  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  S  N  
                    Query_2158   94   GGATTGGCTACATCTATTACAGTGGGGTCACCGACTCCAACCCCTCCCTCAAGGGTCGAGTCACCATATCAGTAGACACTTCCAGCAACC  183
V  91.3% (220/241)  IGHV4-59*08  140  .......G..T...............AG....A...A................A.........................G....AG....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  A  E  R  G  R  P  G  T  
                    Query_2158   184  AGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGGGCCGCAGAGAGAGGAAGGCCTGGGACCT  273
V  91.3% (220/241)  IGHV4-59*08  230  ............A......C..........................G.....C........-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (5/5)     IGHD1-26*01  8    ----------------------------------------------------------------------------------.....---  12
J  97.9% (46/47)    IGHJ5*02     5    ----------------------------------------------------------------------------------------..  6

                                      ---------->                                  
                                      W  F  D  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2158   274  GGTTCGACCCCTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.9% (46/47)    IGHJ5*02     7    ..................A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_76792

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           325     3e-91
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGGGGGAG	ACTATGATCAGAGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGGAGACTATGATCAGAGGTTTGACTAT	ARDGGDYDQRFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  A  W  I  R  Q  A  P  G  K  G  L  
                    Query_2159   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGGCCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-11*01  47   ........................................................AG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  T  S  G  T  D  I  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  W  D  H  A  
                    Query_2159   91   AGTGGATTTCATACATTACTAGTGGTACTGATATCAAATACTACGCAGACTCTGTGAAGGGTCGATTTACCATCTCCTGGGACCACGCCA  180
V  91.6% (229/250)  IGHV3-11*01  137  .....G............G....A..GG.AG..C..T........................C.....C.........A.....A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  G  G  D  Y  D  Q  
                    Query_2159   181  AGAACTCTCTGTATCTGCAAATGAGCAGTCTGAGAGCCGAGGACACGGCCATATATTATTGTGCGAGAGATGGGGGAGACTATGATCAGA  270
V  91.6% (229/250)  IGHV3-11*01  227  .......A................A...C.....................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-16*01  17   ----------------------------------------------------------------------........------------  24

                                      ---------->                                  
                                      R  F  D  Y  G  G  L  G  T  L  V  T  L  S  S  
                    Query_2159   271  GGTTTGACTATGGGGGCCTGGGGACCCTGGTCACCCTCTCCTCAG  315
J  88.4% (38/43)    IGHJ4*02     6    --........CT......A...A............G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_267079

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           336     1e-94
IGHD7-27*01                                                                                           14.1    7.9  
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD7-27*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	CCG	CTGGGGA	N/A	ATCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACCCGCTGGGGAATC	TTRWGI	249	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	234	19	0	92.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  G  F  S  D  T  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2160   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCGGCTTCAGTGACACCTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.5% (234/253)  IGHV3-15*01  47   .......T.......................A...ACT......A..G...GG.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  V  R  T  K  T  E  G  G  T  T  D  Y  A  A  P  G  K  G  R  F  T  I  S  R  D  
                    Query_2160   91   AGTGGGTTGGCCGTGTTAGAACCAAAACTGAAGGCGGGACAACAGACTACGCTGCACCCGGCAAAGGCAGATTCACCATCTCAAGAGATG  180
V  92.5% (234/253)  IGHV3-15*01  137  ..............A...A..G.........T..T.........................TG............................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----CDR3-IMGT--->    
                                      D  S  E  S  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  R  W  G  I  W  
                    Query_2160   181  ATTCAGAAAGCACCCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACCCGCTGGGGAATCTGGG  270
V  92.5% (234/253)  IGHV3-15*01  227  .....A...A...G...........................................................-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (7/7)     IGHD7-27*01  5    ----------------------------------------------------------------------------.......-------  11
J  100.0% (37/37)   IGHJ3*02     14   -----------------------------------------------------------------------------------.......  20

                                                                    
                                      G  Q  G  T  M  V  T  V  S  S  
                    Query_2160   271  GCCAAGGGACAATGGTCACCGTCTCTTCAG  300
J  100.0% (37/37)   IGHJ3*02     21   ..............................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_267078

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-24*01                                                                                           403     1e-114
IGHD3-3*01                                                                                            21.8    0.047 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-24*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCTGCCCGGGG	TTTCGGAGTGGTTA	ACGGGGCCTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACAGATCTGCCCGGGGTTTCGGAGTGGTTAACGGGGCCTGACTACTTTGCCCAC	ATDLPGVSEWLTGPDYFAH	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  R  V  S  G  Y  S  L  N  E  L 
                    Query_2161   2    CAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAGGGTTTCCGGATACAGCCTCAATGAACTA  91
V  94.5% (274/290)  IGHV1-24*01  7    ........A....................................................A..............C.....C....T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T  E  L 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  M  H  W  V  R  Q  A  P  G  K  G  L  T  W  M  G  G  F  D  P  E  E  G  E  T  V  Y  A  Q 
                    Query_2161   92   TCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTACGTGGATGGGAGGCTTTGATCCTGAAGAAGGTGAAACAGTCTACGCACAG  181
V  94.5% (274/290)  IGHV1-24*01  97   .......................................GA............T..............T.........A...........  186
                                       S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  I  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       E  F  Q  G  R  V  T  M  T  E  D  T  S  T  D  T  A  Y  M  E  L  R  S  L  K  S  E  D  T  A 
                    Query_2161   182  GAGTTCCAGGGCAGAGTCACCATGACTGAGGACACCTCTACAGACACAGCCTACATGGAGCTGAGGAGCCTGAAATCTGAAGACACGGCC  271
V  94.5% (274/290)  IGHV1-24*01  187  A.........................C........A.............................C.......G......G.........  276
                                       K  F  Q  G  R  V  T  M  T  E  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  A  T  D  L  P  G  V  S  E  W  L  T  G  P  D  Y  F  A  H  W  G  Q  G  T  Q  V 
                    Query_2161   272  GTGTATTACTGTGCAACAGATCTGCCCGGGGTTTCGGAGTGGTTAACGGGGCCTGACTACTTTGCCCACTGGGGCCAGGGAACCCAGGTC  361
V  94.5% (274/290)  IGHV1-24*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  T                                                                         
D  92.9% (13/14)    IGHD3-3*01   11   -------------------------------...T..........---------------------------------------------  24
J  91.7% (44/48)    IGHJ4*02     1    -------------------------------------------------------.........A.T..................T....  35

                                                   
                                       S  V  S  S  
                    Query_2161   362  TCCGTCTCCTCAG  374
J  91.7% (44/48)    IGHJ4*02     36   A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_76797

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           352     3e-99
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GGG	AGTGGCTGGT	TCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGAGGGGAGTGGCTGGTTCCCTTTGAGCAC	GGGEWLVPFEH	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	64	5	0	92.8
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	5	2	0	71.4
Total	N/A	N/A	289	257	32	0	88.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  R  F  T  S  L 
                    Query_2162   2    CAGCTGGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTAAAACCTCTGGTTATAGATTTACCAGCCTT  91
V  88.9% (257/289)  IGHV1-18*01  7    .......................G...................................C..GG.T........C.CC.........TA.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  T  T  Y  N  D  D  T  K  Y  P  Q 
                    Query_2162   92   GGTATCAGTTGGGTACGACAGGCCCCTGGACAAGGACTTGAGTGGCTGGGCTGGATCACCACTTACAATGATGACACGAAGTATCCACAG  181
V  88.9% (257/289)  IGHV1-18*01  97   ........C.....G....................G.........A....A.......G.G.........G.A....A..C...G.....  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  L  T  L  T  T  D  R  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_2162   182  AAGTTTCAGGGCAGACTCACGTTGACCACAGACAGATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTCAGATCTGACGACACGGCC  271
V  88.9% (257/289)  IGHV1-18*01  187  ...C.C.........G....CA............C....................................G..................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  G  G  G  E  W  L  V  P  F  E  H  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_2162   272  GTATATTACTGTGGGGGAGGGGAGTGGCTGGTTCCCTTTGAGCACTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  350
V  88.9% (257/289)  IGHV1-18*01  277  ..G..........C.A...------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                              
D  100.0% (10/10)   IGHD6-19*01  10   ----------------------..........-----------------------------------------------  19
J  93.2% (41/44)    IGHJ4*02     5    -----------------------------------......CT....................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_76796

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_2163   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_2163   91   GAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ...................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_2163   181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  95.7% (44/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2163   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTTTCCTCA  309
J  95.7% (44/46)    IGHJ6*02     24   ................................C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_76795

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           300     9e-84
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCCCGTTTTGCCCAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCCCGTTTTGCCCAG	ARAICIAGNCYGRGPRFAQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	21	9	0	70
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  V  Y  D  D  G  S  Y  W  S  W  I  R  Q  A  P  G  K  G 
                    Query_2164   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCGTCTACGATGACGGCTCCTACTGGAGCTGGATCCGGCAAGCCCCAGGGAAGGGA  90
V  88.4% (221/250)  IGHV4-61*08  49   ...............................G.......AG.AG..GT..T.A.....................GC..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  N  Y  N  P  S  P  N  S  R  G  T  I  S  P  D  T  S 
                    Query_2164   91   CTAGAGTGGATTGGGTATATCCATCACAGCGGGAGCACCAACTACAACCCCTCCCCCAACAGTCGAGGTACCATATCACCTGACACGTCC  180
V  88.4% (221/250)  IGHV4-61*08  139  ..G..................T..T....T.........................T...G.......TC.........GTA.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  S  L  R  L  K  S  V  T  A  A  G  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N 
                    Query_2164   181  AGGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGGCACGGCCGTCTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAAC  270
V  88.4% (221/250)  IGHV4-61*08  229  .A.................A.....GC................A.........G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G..G.....G.  22

                                      3-IMGT----------------------->                                  
                                       C  Y  G  R  G  P  R  F  A  Q  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_2164   271  TGCTACGGGCGGGGCCCCCGTTTTGCCCAGTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  334
D  86.4% (19/22)    IGHD2-15*01  23   ......----------------------------------------------------------  28
J  97.1% (33/34)    IGHJ4*02     15   ------------------------------...........................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_126835

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           325     3e-91
IGHD2-15*01                                                                                           21.8    0.044
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTGAC	GATATTATAGTGGT	ATTAACTGCCCTTAACAGAGCGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTGACGATATTATAGTGGTATTAACTGCCCTTAACAGAGCGGGCTACTCCGGTCTGGACGTC	AREGDDIIVVLTALNRAGYSGLDV	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  R  R  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2165   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTCAGACGATATGAAATGAACTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-48*03  47   ....................................CC.....TA.T..........................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  N  S  N  G  S  V  T  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  G  
                    Query_2165   91   AGTGGATTTCATACATTAATAGTAATGGAAGTGTCACACACTACGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGGCA  180
V  91.6% (229/250)  IGHV3-48*03  137  .....G............G.....G...T...AC..T.T................................A...............C..  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  K  S  L  Y  L  Q  M  S  N  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  G  D  D  I  I  V  
                    Query_2165   181  AGAAGTCACTGTATCTGCAAATGAGTAACCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGCGAGAGAGGGTGACGATATTATAGTGG  270
V  91.6% (229/250)  IGHV3-48*03  227  ....C...................AC.G......................G...................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.9% (13/14)    IGHD2-15*01  3    -----------------------------------------------------------------------------......G......  15

                                      ----CDR3-IMGT------------------------------>                                 
                                      V  L  T  A  L  N  R  A  G  Y  S  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2165   271  TATTAACTGCCCTTAACAGAGCGGGCTACTCCGGTCTGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTCCTCA  347
D  92.9% (13/14)    IGHD2-15*01  16   .----------------------------------------------------------------------------  16
J  94.2% (49/52)    IGHJ6*02     11   -------------------------.....A....A................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_267072

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           364     6e-103
IGHD3-3*01                                                                                            19.9    0.17  
IGHJ4*02                                                                                              56.4    4e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CACTCATTCATTTGAAAGTGC	TGGTTATTACACC	TTTTGGTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACTCATTCATTTGAAAGTGCTGGTTATTACACCTTTTGGTTC	ATHSFESAGYYTFWF	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	16	8	0	66.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	259	26	0	90.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  C  T  L  N  S  H
                    Query_2166   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGATGCACCCTCAACAGCCA  90
V  90.9% (259/285)  IGHV1-69*06  6    ..................G......................................................G.....T...G....T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  V  S  N  T  G  D  Y  A  Q
                    Query_2166   91   TGGCATCAGTTGGGTGCGACAGGCCCCCGGGCAAGGGCTTGAGTGGATGGGAGGGATCATTCCTGTTTCGAATACAGGAGACTACGCACA  180
V  90.9% (259/285)  IGHV1-69*06  96   ..CT.....C.................T..A.............................C...A.C.TTGG.....C.A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  K  P  G  D  T  A
                    Query_2166   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAAACCTGGCGACACGGC  270
V  90.9% (259/285)  IGHV1-69*06  186  ..........................................................................G.T...AG........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  F  C  A  T  H  S  F  E  S  A  G  Y  Y  T  F  W  F  W  G  Q  G  P  R  V  T  V  S  S
                    Query_2166   271  CGTATATTTTTGTGCCACTCATTCATTTGAAAGTGCTGGTTATTACACCTTTTGGTTCTGGGGCCAGGGACCCCGGGTCACCGTCTCCTC  360
V  90.9% (259/285)  IGHV1-69*06  276  ...G....AC.....---------------------------------------------------------------------------  290
                                        V  Y  Y  C  A                                                                           
D  92.3% (12/13)    IGHD3-3*01   19   ------------------------------------.........T...-----------------------------------------  31
J  94.3% (33/35)    IGHJ4*02     14   ---------------------------------------------------------.............A...T...............  46

                                        
                                        
                    Query_2166   361  AG  362
J  94.3% (33/35)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_267071

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           329     3e-92
IGHD6-6*01                                                                                            10.3    121  
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAAA	TTTTCCA	CGTCC	CTCCTGCCGCAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAATTTTCCACGTCCCTCCTGCCGCAATACGGGATGGACGCC	VKFSTSLLPQYGMDA	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  N  Y  I  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2167   1    GGTCTCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAATAACTATATTCTGCACTGGGTCCGCCAGGCTCCCGGGAAGGGACTGG  90
V  92.3% (229/248)  IGHV3-64*05  47   ....C.....................................G..G....GC.A......................A.............  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  A  I  S  S  N  G  D  S  T  Y  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2167   91   AATTTGTTTCAGCTATTAGCAGTAATGGAGATAGCACATACTCCGCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  92.3% (229/248)  IGHV3-64*05  137  ...A...............T........G.G...........A...............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  G  V  Y  Y  C  V  K  F  S  T  S  L  L  P  
                    Query_2167   181  AGAACACATTGTTTCTTCAAATGAACAGTCTGAGAGCTGAGGACACGGGTGTATATTACTGTGTGAAATTTTCCACGTCCCTCCTGCCGC  270
V  92.3% (229/248)  IGHV3-64*05  227  .......GC...A.G.........G.......................C...G...............----------------------  294
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (5/5)     IGHD6-6*01   14   ---------------------------------------------------------------------------.....----------  18

                                      ---------------->                                 
                                      Q  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_2167   271  AATACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  320
J  91.7% (44/48)    IGHJ6*02     15   --.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_76798

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           371     6e-105
IGHD3-3*01                                                                                            14.1    8.3   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	241	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2168   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCACCAGGGAAGGGGCTGGAG  90
V  98.4% (241/245)  IGHV4-34*01  49   .................................................A.....................C..................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_2168   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.4% (241/245)  IGHV4-34*01  139  .........................................................................T................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_2168   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  98.4% (241/245)  IGHV4-34*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2168   271  GCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_267076

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            397     8e-113
IGHD6-6*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGG	GCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGGGCTGAGGAACCAGCTCGTATCCGACTTC	AGGLRNQLVSDF	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	100	14	0	87.7
CDR3-IMGT (germline)	291	298	8	7	1	0	87.5
Total	N/A	N/A	296	275	21	0	92.9


Alignments

                                     <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                      Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S 
                    Query_2169  3    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGC  92
V  92.9% (275/296)  IGHV1-8*02  1    ...G...................G..........................................................C.....C.  90
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                     GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                      S  Y  D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 
                    Query_2169  93   AGCTATGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTAT  182
V  92.9% (275/296)  IGHV1-8*02  91   .............A.........................................................C..................  180
                                      S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                     -----------------------------------------------FR3-IMGT-----------------------------------
                                      A  Q  K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  T  A  E  D 
                    Query_2169  183  GCACAGAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCACCGCTGAAGAC  272
V  92.9% (275/296)  IGHV1-8*02  181  ............C............C.......A..A...C.T....A..................C..........G.GAT....G...  270
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                     -----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  V  Y  Y  C  A  G  G  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2169  273  ACGGCCGTATATTACTGTGCGGGAGGGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  92.9% (275/296)  IGHV1-8*02  271  ........G............A....--------------------------------------------------------------  296
                                      T  A  V  Y  Y  C  A  R  G                                                              
D  100.0% (8/8)     IGHD6-6*01  9    ------------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    ------------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_267075

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           322     2e-90
IGHD2-2*01                                                                                            21.8    0.041
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAACTTAC	TGTACTAGTACCACCTG	TTCTAAT	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAACTTACTGTACTAGTACCACCTGTTCTAATTACGACGGTATGGACGTC	ARGTYCTSTTCSNYDGMDV	237	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	47	4	0	92.2
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	111	3	0	97.4
CDR3-IMGT (germline)	237	241	5	5	0	0	100
Total	N/A	N/A	230	218	12	0	94.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  T  Y  A  V  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  F  I 
                    Query_2170   12   TGTGCAGCGTCTGGATTCACCTTCAGTACTTATGCCGTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGGAGTGGGTGGCATTCATA  101
V  94.8% (218/230)  IGHV3-33*01  64   ............................GC....G.A...............................G...............G.T...  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       Y  Y  D  G  S  N  K  Y  Y  A  G  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_2170   102  TACTATGATGGAAGTAATAAATACTATGCAGGCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTG  191
V  94.8% (218/230)  IGHV3-33*01  154  .GG............................A..........................................................  243
                                       W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------------CDR3-IMGT------------
                                       Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  T  Y  C  T  S  T  T  C  S  N  Y  D 
                    Query_2170   192  CAAATGAGCAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGGGGAACTTACTGTACTAGTACCACCTGTTCTAATTACGAC  281
V  94.8% (218/230)  IGHV3-33*01  244  .......A...........................G..............----------------------------------------  293
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  88.2% (15/17)    IGHD2-2*01   8    ------------------------------------------------------------....G........G...-------------  24
J  98.0% (50/51)    IGHJ6*02     12   ------------------------------------------------------------------------------------...T..  17

                                      ----------->                                 
                                       G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2170   282  GGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  98.0% (50/51)    IGHJ6*02     18   .............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_267074

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD1-26*01                                                                                           12.2    37    
IGHJ6*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATGAG	AGTGGCAGTTAC	CTTTAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGAGAGTGGCAGTTACCTTTATTACTTCTGCGGTGTGGACGTC	ARHGDESGSYLYYFCGVDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	270	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  L  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_2171   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGCTCTCCTGTAAGGCTTCTGGATACACCTTTACAAACTA  90
V  92.8% (270/291)  IGHV5-51*01  6    ....................................................A............G...........G......C.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  D  W  V  R  *  M  P  G  K  G  M  E  W  M  G  I  I  F  P  G  Y  S  D  A  R  Y  S  P
                    Query_2171   91   CTGGATCGACTGGGTGCGCTAGATGCCCGGGAAAGGCATGGAGTGGATGGGGATCATCTTTCCTGGTTACTCTGATGCCAGATACAGCCC  180
V  92.8% (270/291)  IGHV5-51*01  96   ........G..........C.................C.....................A.......G........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  L  E  G  Q  I  T  I  S  A  D  N  P  I  G  T  A  Y  L  Q  L  H  S  L  K  A  S  D  T  A
                    Query_2171   181  GTCCCTCGAAGGCCAAATCACCATCTCAGCCGACAACCCCATCGGCACCGCCTACCTGCAGTTGCACAGCCTGAAGGCCTCGGACACCGC  270
V  92.8% (270/291)  IGHV5-51*01  186  ....T..C.......GG...................GT.....A..................G.AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  E  S  G  S  Y  L  Y  Y  F  C  G  V  D  V  G  G  Q  G  T  T  I
                    Query_2171   271  CATGTATTACTGTGCGAGACATGGGGATGAGAGTGGCAGTTACCTTTATTACTTCTGCGGTGTGGACGTCGGGGGCCAAGGGACCACGAT  360
V  92.8% (270/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  83.3% (10/12)    IGHD1-26*01  6    -------------------------------.....G..C...-----------------------------------------------  17
J  90.7% (49/54)    IGHJ6*02     9    -------------------------------------------------....A..A....A........T.................G.  49

                                                   
                                        T  V  S  S 
                    Query_2171   361  CACCGTCTCCTCA  373
J  90.7% (49/54)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_71222

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            353     9e-100
IGHD3-10*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	AATCGGGTGGGC	GGTTCGGGGA	TTTGTGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAATCGGGTGGGCGGTTCGGGGATTTGTGGTAC	VKSGGRFGDLWY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	236	10	0	95.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  L  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2172   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCACCTTTCTTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.9% (236/246)  IGHV3-7*03   47   ......................A..................AG...............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  T  E  K  K  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2172   91   AGTGGGTGGCCAATATAAAGCAAGATGGTACTGAGAAAAAGTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.9% (236/246)  IGHV3-7*03   137  .............C..............A.G.......T.C.................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K  S  G  G  R  F  G  D  
                    Query_2172   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGTGAAATCGGGTGGGCGGTTCGGGGATT  270
V  95.9% (236/246)  IGHV3-7*03   227  ....................................................G..........C..------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD3-10*01  11   ------------------------------------------------------------------------------..........--  20

                                      ------->                                  
                                      L  W  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2172   271  TGTGGTACTGGGGCCAGGGAACACTGGTCACCGTCTCCTCAG  312
J  97.3% (36/37)    IGHJ4*02     12   -----.................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_264525

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           297     8e-83
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCACCGGTGG	AGCAATGGCTGG	GGAACATACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCACCGGTGGAGCAATGGCTGGGGAACATACTATAATTACGGTATGGACGCC	ARGHRWSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	21	3	6	70
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	221	21	6	89.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  T  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_2173   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGCCCTTCACTGACAGTGGTTATTATTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  89.1% (221/248)  IGHV4-34*12  49   .......................C..T......T......------.......C..C....G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  I  D  T  S 
                    Query_2173   91   CTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAACCCGTCCCTCCAGAGTCGAGTCACCATATCAATAGACACGTCC  180
V  89.1% (221/248)  IGHV4-34*12  133  .....G.............T.......AG.....G......................A....................G...........  222
                                       L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  W  S  N  G 
                    Query_2173   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGGGGCCACCGGTGGAGCAATGGC  270
V  89.1% (221/248)  IGHV4-34*12  223  ....................GC............C........................C........----------------------  290
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_2173   271  TGGGGAACATACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  93.8% (45/48)    IGHJ6*02     15   ------------------.............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_71220

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2174   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2174   91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........GT........T.......G...............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_2174   181  CAGTTCTCCCTAAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.1% (233/245)  IGHV4-59*01  229  ...........G.A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2174   271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_346274

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           389     2e-110
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTAGCG	GCACTGGCTGGTA	TTTGGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGTAGCGGCACTGGCTGGTATTTGGCCTAC	ARGSGTGWYLAY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  M  F  T  T  Y 
                    Query_2175   2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCCAGGCTTCTGGTTACATGTTTACCACTTAC  91
V  93.1% (269/289)  IGHV1-18*04  7    ...................C........................................A...............CC.......GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  G  Y  N  G  N  T  K  Y  A  Q 
                    Query_2175   92   GGCATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGCTGGGATGGATCAGCGGCTACAATGGTAACACAAAGTATGCACAG  181
V  93.1% (269/289)  IGHV1-18*04  97   ..T..........................................A...............CT.................C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  D  R  V  T  L  T  I  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_2175   182  AACCTCCAGGACAGAGTCACCCTGACCATAGACACATCTACGAGCACTGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  93.1% (269/289)  IGHV1-18*04  187  ..G.......G..........A......C.........C........A.....C....................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  G  S  G  T  G  W  Y  L  A  Y  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_2175   272  GTCTATTACTGTGCGCGAGGTAGCGGCACTGGCTGGTATTTGGCCTACTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  353
V  93.1% (269/289)  IGHV1-18*04  277  ..G............A...---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  92.3% (12/13)    IGHD6-19*01  8    -------------------------...G.........--------------------------------------------  20
J  97.4% (37/38)    IGHJ4*02     11   --------------------------------------------......................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_71226

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           358     4e-101
IGHD3-16*01                                                                                           14.1    8.1   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TTTGGGTTT	GTTTGGG	ACTAAATTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTTTGGGTTTGTTTGGGACTAAATTCGAC	ASLGLFGTKFD	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  L  S  G  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2176   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCCTCAGTGGTTATGAGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (238/247)  IGHV3-48*03  47   ........................C.............T.....A.......A.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  N  G  V  T  I  Y  Y  A  H  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2176   91   AGTGGGTTTCATACATTAGTAGTAATGGTGTTACCATATATTACGCACACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (238/247)  IGHV3-48*03  137  ........................G....AG.........C......G..........................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  L  G  L  F  G  T  K  
                    Query_2176   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGTTTGGGTTTGTTTGGGACTAAAT  270
V  96.4% (238/247)  IGHV3-48*03  227  ...................................................................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  14   ----------------------------------------------------------------------------.......-------  20

                                      ---->                                  
                                      F  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2176   271  TCGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (36/36)   IGHJ4*02     13   ---....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_71227

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           392     2e-111
IGHD3-9*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              69.9    4e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	CT	CGATCTTATGATTGGTTATTATAAC	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGACTCGATCTTATGATTGGTTATTATAACCTTGACCAG	ARLDLMIGYYNLDQ	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	65	9	0	87.8
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	110	4	0	96.5
CDR3-IMGT (germline)	291	296	6	5	1	0	83.3
Total	N/A	N/A	293	272	21	0	92.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  V  E  V  R  R  P  G  E  S  L  T  I  S  C  V  A  S  G  Y  T  F  S  
                    Query_2177   4    AGGTCCAGCTGGTACAGTCTGGAGTAGAGGTGAGAAGGCCGGGGGAGTCTCTGACGATCTCCTGTGTGGCTTCTGGATACACTTTTTCCA  93
V  92.8% (272/293)  IGHV5-51*03  2    ....G........G..........C........A..A.................A..........AA..G...........GC...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  S  Y  
                    Query_2177   94   CCTACTGGATCGCCTGGGTGCGCCAGATGCCCGGTAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGTTACA  183
V  92.8% (272/293)  IGHV5-51*03  92   G...........G.....................G.............G....................................A....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_2177   184  GTCCGTCCTTCCAAGGCCAGGTCACCATTTCAGCCGACAAGTCCATCAGAACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  92.8% (272/293)  IGHV5-51*03  182  .C..........................C....................C........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  A  R  L  D  L  M  I  G  Y  Y  N  L  D  Q  W  G  Q  G  T  L  V  T  V  S  
                    Query_2177   274  CCGCCATGTATTACTGTGCAAGACTCGATCTTATGATTGGTTATTATAACCTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  363
V  92.8% (272/293)  IGHV5-51*03  272  ...................G...-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  88.0% (22/25)    IGHD3-9*01   7    -------------------------....A..T...C.............----------------------------------------  31
J  95.2% (40/42)    IGHJ4*02     7    ---------------------------------------------------.....T.C...............................  45

                                         
                                      S  
                    Query_2177   364  CAG  366
J  95.2% (40/42)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_71224

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           406     1e-115
IGHD1-26*01                                                                                           10.3    132   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCCC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCCCGTGGGGCTACTTTGCCTAC	ARDLPWGYFAY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_2178   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  94.8% (275/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  Y  A  Q 
                    Query_2178   92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTATGCACAG  181
V  94.8% (275/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  M  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_2178   182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCATGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (275/290)  IGHV1-18*01  187  AA......................................C.................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  C  C  A  R  D  L  P  W  G  Y  F  A  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_2178   272  ATATATTGCTGTGCGAGAGATCTCCCGTGGGGCTACTTTGCCTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  94.8% (275/290)  IGHV1-18*01  277  G.G....A............-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  95.7% (45/47)    IGHJ4*02     2    --------------------------------........A.................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_71225

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*03                                                                                           299     3e-83
IGHD3-22*01                                                                                           23.8    0.012
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TAGTCCGAAAACCGCTGGGA	TATGACTATGAGAGTAGCGGT	GA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTAGTCCGAAAACCGCTGGGATATGACTATGAGAGTAGCGGTGATGACTAC	AKVVRKPLGYDYESSGDDY	261	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	102	54	50	1	3	92.6
CDR2-IMGT	103	146	39	20	4	15	51.3
FR3-IMGT	147	260	114	106	8	0	93
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	233	16	18	87.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><-------------------FR2-IMGT---------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_2179   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTTAGTAACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.3% (233/267)  IGHV3-23*03  47   ....................G......................C.G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -----------><-----------------CDR2-IMGT----------------><---------------------------------
                                      E  W  V  S  G  I  T  S  R  G  G  S  S  G  G  G  G  G  T  Y  Y  A  D  S  V  K  G  R  F  T  
                    Query_2179   91   AGTGGGTCTCAGGCATTACTAGTAGGGGTGGTAGTAGTGGAGGGGGTGGCGGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCA  180
V  87.3% (233/267)  IGHV3-23*03  137  ............---...T.TA...C...........---------------.........T............................  208
                                      E  W  V  S     V  I  Y  S  G  G  S  S                 T  Y  Y  A  D  S  V  K  G  R  F  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  R  D  N  S  K  N  T  L  F  L  L  M  K  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  V  
                    Query_2179   181  TCTCCAGAGACAATTCCAAGAACACACTGTTTCTGCTAATGAAGAGCCTGAGAGTCGAGGACACGGCCGTCTATTACTGTGCGAAAGTAG  270
V  87.3% (233/267)  IGHV3-23*03  209  ..........T..............G....A.....A......C..........C...............A................---  295
                                      I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K     

                                      --------------CDR3-IMGT----------------------->                                
                                      V  R  K  P  L  G  Y  D  Y  E  S  S  G  D  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2179   271  TCCGAAAACCGCTGGGATATGACTATGAGAGTAGCGGTGATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  349
D  85.7% (18/21)    IGHD3-22*01  2    -----------------...T.......T.....T...-----------------------------------------  22
J  100.0% (39/39)   IGHJ4*02     8    ----------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_300765

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           302     3e-84
IGHD5-18*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	CTTAC	GTGGATTCGCCTATGGTT	CAC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGGACTTACGTGGATTCGCCTATGGTTCACTTGAGTTC	AKDLRGFAYGSLEF	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	23	1	0	95.8
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	125	24	18	6	0	75
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	233	213	20	0	91.4


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  V  E  W  V  S  L  L 
                    Query_2180   15   TGTGCAGCCTCTGGATTCACCTTTGATGATTACACCATGCACTGGGTCCGTCAAGCTCCGGGCAAGGGTGTGGAATGGGTCTCTCTTCTT  104
V  91.4% (213/233)  IGHV3-43*01  64   ................................T.............................G......C....G............A..  153
                                       C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  L  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       T  W  D  G  T  R  T  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  K  K  S  L  F  L 
                    Query_2180   105  ACTTGGGATGGGACTAGAACATACTATGCGGACTCTGTGAAGGGCCGATTCATCATCTCCAGAGACAAGAGCAAAAAATCACTGTTTCTG  194
V  91.4% (213/233)  IGHV3-43*01  154  .G.........TGG...C...........A......................C...............C........C..C....A....  243
                                       S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  S  L  Y  L 

                                      --------------------------------------------><----------------CDR3-IMGT--------------->   
                                       Q  M  N  S  L  R  P  E  D  S  A  L  Y  Y  C  A  K  D  L  R  G  F  A  Y  G  S  L  E  F  W 
                    Query_2180   195  CAAATGAACAGTCTGAGACCTGAGGACAGCGCCTTATATTACTGTGCAAAGGACTTACGTGGATTCGCCTATGGTTCACTTGAGTTCTGG  284
V  91.4% (213/233)  IGHV3-43*01  244  ..................A.........C......G..............A..-------------------------------------  296
                                       Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A  K                                        
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------......A.AG........--------------  18
J  95.2% (40/42)    IGHJ4*02     7    -------------------------------------------------------------------------------....C.A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_2180   285  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  95.2% (40/42)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_71228

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            332     3e-93
IGHD3-10*01                                                                                           12.2    31   
IGHJ3*01                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-10*01	IGHJ3*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	ATGTTTCGG	CCCTAGGGTGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGATGTTTCGGCCCTAGGGTGTTTTTGATGTC	AREMFRP*GVFDV	237	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	110	4	0	96.5
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	232	222	10	0	95.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  G  S  G  F  T  F  S  R  Y  W  M  G  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  
                    Query_2181   13   GTGCAGGCTCTGGATTCACCTTTAGTCGTTATTGGATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAA  102
V  95.7% (222/232)  IGHV3-7*01   65   ......C...................A.C.........A...................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      K  E  D  G  S  E  K  Y  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  D  A  K  S  S  L  F  L  
                    Query_2181   103  AGGAAGATGGAAGTGAGAAGTACTATGTGGACTCTGTGGAGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAGCTCACTGTTTCTGC  192
V  95.7% (222/232)  IGHV3-7*01   155  ..C................A..................A..........................A.........A........A.....  244
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><--------------CDR3-IMGT-------------->       
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  M  F  R  P  *  G  V  F  D  V  W  G  
                    Query_2181   193  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGATGTTTCGGCCCTAGGGTGTTTTTGATGTCTGGGGCC  282
V  95.7% (222/232)  IGHV3-7*01   245  ....................................................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  88.9% (8/9)      IGHD3-10*01  9    -----------------------------------------------------...G.....----------------------------  17
J  92.9% (39/42)    IGHJ3*01     7    -------------------------------------------------------------------------.................  23

                                                               
                                      P  G  T  V  V  S  V  S  S
                    Query_2181   283  CAGGGACAGTGGTCTCCGTCTCTTC  307
J  92.9% (39/42)    IGHJ3*01     24   A.......A.....A..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_71229

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTC	ARHGDDSGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	283	8	0	97.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_2182   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCACCTA  90
V  97.3% (283/291)  IGHV5-51*01  6    ..............................A...................A...................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  T  R  Y  S  P
                    Query_2182   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  97.3% (283/291)  IGHV5-51*01  96   ........G.................................................T...............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2182   181  GTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.3% (283/291)  IGHV5-51*01  186  .......C...................A.C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  D  S  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_2182   271  CATGTATTACTGTGCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  97.3% (283/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------........A.....-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------.......AC.....T.............................  49

                                                   
                                        T  V  S  S 
                    Query_2182   361  CACCGTCTCCTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_264528

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           315     5e-88
IGHD6-13*01                                                                                           14.1    9.0  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTGGTCG	GCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTGGTCGGCAGCTGACTGACTAC	ARDSGRQLTDY	276	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	275	147	111	3	33	75.5
CDR3-IMGT (germline)	276	283	8	8	0	0	100
Total	N/A	N/A	283	244	6	33	86.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_2183   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  86.2% (244/283)  IGHV3-21*01  47   ..............................................C..................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  H  I  Y  Y  G  D  S  V  R  G  R  F  T  Y  Y  A  D  S  V  
                    Query_2183   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAGTCACATATATTATGGAGACTCAGTGAGGGGCCGATTCACCTATTACGCAGACTCAGTGA  180
V  86.2% (244/283)  IGHV3-21*01  137  ................................T.....---------------------------------..C................  193
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I                                   Y  Y  A  D  S  V  

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                      K  G  R  F  T  I  S  R  D  D  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  
                    Query_2183   181  AGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATT  270
V  86.2% (244/283)  IGHV3-21*01  194  ..........................A..........................................................G....  283
                                      K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-----------CDR3-IMGT----------->                                  
                                      Y  C  A  R  D  S  G  R  Q  L  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2183   271  ACTGTGCGAGAGATTCTGGTCGGCAGCTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
V  86.2% (244/283)  IGHV3-21*01  284  .............-----------------------------------------------------------  296
                                      Y  C  A  R                                                              
D  100.0% (7/7)     IGHD6-13*01  11   ----------------------.......-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_158383

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           353     1e-99
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCGG	TTACGATTTCTGGAGTGGTTATTTTAC	GGACGGGTAT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCGGTTACGATTTCTGGAGTGGTTATTTTACGGACGGGTATCTGGTTCGACCCC	ARDSVTISGVVILRTGIWFDP	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_2184   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-11*01  47   ..........................................G...............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  Y  I  S  S  S  G  R  T  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_2184   91   AGTGGGTTGCATACATTAGTAGTAGTGGTCGTACCAAATACTACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCCGGGACGACGCCA  180
V  95.2% (238/250)  IGHV3-11*01  137  ........T....................A......T...........................A............A.....A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R  D  S  V  T  I  S  G  
                    Query_2184   181  AGAACTCCGTGTATTTGCAAATGAACAGCCTGAGAGCCGGGGACACGGCCGTCTATTACTGTGCGAGAGATTCGGTTACGATTTCTGGAG  270
V  95.2% (238/250)  IGHV3-11*01  227  .......AC.....C........................A............G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.6% (25/27)    IGHD3-3*01   4    ---------------------------------------------------------------------------.........T.....  18

                                      DR3-IMGT-------------------------->                                  
                                      V  V  I  L  R  T  G  I  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2184   271  TGGTTATTTTACGGACGGGTATCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  92.6% (25/27)    IGHD3-3*01   19   ........A...---------------------------------------------------------  30
J  100.0% (47/47)   IGHJ5*02     5    ----------------------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_72385

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           367     6e-104
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2185   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2185   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.2% (242/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_2185   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  97.2% (242/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_2185   271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_206029

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            322     2e-90
IGHD3-9*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAAGAGCGGTACGCATTGAT	ACTGTTTATTA	CGAGGGGCCTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAAGAGCGGTACGCATTGATACTGTTTATTACGAGGGGCCTCCTGACTAC	ATRAVRIDTVYYEGPPDY	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  N  S  N  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_2186  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGTCCATCAGTAATAGTAACTGGTGGACTTGGATTCGCCAGCCCCCAGGAAAGGGGCTG  90
V  92.2% (225/244)  IGHV4-4*01  49   ................................C........C.G..............G....G.C..............G.........  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  I  D  S  G  S  T  N  Y  N  P  S  L  M  S  R  V  I  I  S  L  D  K  S  K 
                    Query_2186  91   GAGTGGATTGGGGAAATTATTGATAGTGGGAGCACCAACTACAACCCGTCCCTCATGAGTCGAGTCATCATCTCACTAGACAAGTCCAAG  180
V  92.2% (225/244)  IGHV4-4*01  139  .................CTA.C.................................A...........C...A...G..............  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                      N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  T  R  A  V  R  I  D  T  V 
                    Query_2186  181  AATCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGACAAGAGCGGTACGCATTGATACTGTT  270
V  92.2% (225/244)  IGHV4-4*01  229  ..C..............G....G................................G........--------------------------  292
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  90.9% (10/11)    IGHD3-9*01  17   ------------------------------------------------------------------------------------....G.  22

                                     GT--------------------->                                  
                                      Y  Y  E  G  P  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2186  271  TATTACGAGGGGCCTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  90.9% (10/11)    IGHD3-9*01  23   .....-----------------------------------------------------  27
J  100.0% (41/41)   IGHJ4*02    8    -----------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_144710

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_2187  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01  49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_2187  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01  139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_2187  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01  229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01  13   ----------------------------------------------------------------------.....C..G...--------  24

                                     ----------->                                  
                                      G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_2187  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02    6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_309414

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           316     2e-88
IGHD5-12*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	T	TGGTTACGAT	CGATTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTTGGTTACGATCGATTCCTTGACAAC	ARVGYDRFLDN	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  P  L  T  C  T  V  S  G  G  S  V  N  D  G  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  R 
                    Query_2188   1    ACCCTGCCCCTCACCTGCACTGTCTCGGGTGGCTCCGTCAACGATGGTAATTATTACTGGAGCTGGATCCGACAGCCCCCAGGGAAGAGA  90
V  90.4% (226/250)  IGHV4-61*01  49   ......T...................T.............G.AG.....G...C.................G...............G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  F  I  Y  Y  T  G  S  T  T  D  N  P  S  L  K  S  R  V  T  M  S  V  D  T  P 
                    Query_2188   91   CTGGAGTGGATGGGGTTTATCTATTACACTGGGAGCACCACCGACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGCCC  180
V  90.4% (226/250)  IGHV4-61*01  139  ...........T....A...........G...........A.T...............................A.....A......T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  R  L  W  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  V  G  Y  D  R  F  L 
                    Query_2188   181  AAGAACCAGTTCTCCCTGCGGCTATGGTCTGTGACCTCTGCGGACACGGCCGTGTATTACTGTGCCAGAGTTGGTTACGATCGATTCCTT  270
V  90.4% (226/250)  IGHV4-61*01  229  ..................AA...GA.C.........G............................G....--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD5-12*01  11   -----------------------------------------------------------------------...C......---------  20
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2188   271  GACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  97.6% (41/42)    IGHJ4*02     9    ...T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_309415

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           438     5e-125
IGHD6-13*01                                                                                           12.2    35    
IGHJ3*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGGAAGCGGGCCGCACA	TGGTAC	GC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGGAAGCGGGCCGCACATGGTACGCCTTTTGATATC	AWKRAAHGTPFDI	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	283	3	0	99


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_2189   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCACCTA  90
V  99.0% (283/286)  IGHV5-51*01  6    ......................................................................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_2189   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  99.0% (283/286)  IGHV5-51*01  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2189   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  99.0% (283/286)  IGHV5-51*01  186  ............................................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        I  Y  Y  C  A  W  K  R  A  A  H  G  T  P  F  D  I  W  G  Q  G  T  M  V  S  V  S  S  
                    Query_2189   271  CATTTATTACTGTGCGTGGAAGCGGGCCGCACATGGTACGCCTTTTGATATCTGGGGCCAGGGGACTATGGTCAGCGTCTCTTCAG  356
V  99.0% (283/286)  IGHV5-51*01  276  ...G............----------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                       
D  100.0% (6/6)     IGHD6-13*01  16   ---------------------------------......-----------------------------------------------  21
J  93.3% (42/45)    IGHJ3*02     6    -----------------------------------------...................A.....A.......C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_309412

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           335     4e-94
IGHD2-15*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	ACCCGTTTTGTCT	TGGCGGTAGATGC	ATCTCGGGCTTGAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACCCGTTTTGTCTTGGCGGTAGATGCATCTCGGGCTTGAGTGACTTC	ARDPFCLGGRCISGLSDF	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  P  F  S  G  H  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_2190   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGCCCTTCAGTGGTCACTACTGGAACTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  93.9% (229/244)  IGHV4-34*01  49   .........................A.......T...........T.........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  R  G  G  S  T  T  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_2190   91   TGGATTGGGGAAATCAATCGTGGTGGAAGCACCACCTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCTGTAGACACGTCCAAGAAC  180
V  93.9% (229/244)  IGHV4-34*01  139  ...................A.A............A.................................A..A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  F  C  L  G  G  R  C 
                    Query_2190   181  CAATTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGCGAGACCCGTTTTGTCTTGGCGGTAGATGC  270
V  93.9% (229/244)  IGHV4-34*01  229  ..G...........G....G...........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (11/13)    IGHD2-15*01  13   -----------------------------------------------------------------------------...T.....C...  25

                                      -------------------->                                  
                                       I  S  G  L  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2190   271  ATCTCGGGCTTGAGTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.6% (40/41)    IGHJ4*02     8    --------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_346271

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           315     5e-88
IGHD3-22*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGTGTTCGGAAATCAG	TATGATGGTAGTGGTTA	CCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTGTTCGGAAATCAGTATGATGGTAGTGGTTACCCTGACTCC	ARGVFGNQYDGSGYPDS	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  S  A  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_2191   1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAGTGCTTACTACTGGAGTTGGGTCCGGCAGCCCCCAGGGAAGGGGCTGGAG  90
V  91.4% (222/243)  IGHV4-59*08  49   ...........................G..............AG............C...A......................A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  L  Y  Y  R  G  S  T  R  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  K 
                    Query_2191   91   TGGATTGGGAATCTGTATTACAGAGGTAGTACCAGATACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAG  180
V  91.4% (222/243)  IGHV4-59*08  139  .........T..A.C........T..G..C....AC....................................G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  E  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  F  G  N  Q  Y  D  G 
                    Query_2191   181  CAATTCTCCCTGGAGGTGCGCTCTGTCACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGGGGTGTTCGGAAATCAGTATGATGGT  270
V  91.4% (222/243)  IGHV4-59*08  229  ..G.........A..C..A.......G....................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD3-22*01  8    ---------------------------------------------------------------------------------......A..  16

                                      ----------------->                                  
                                       S  G  Y  P  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2191   271  AGTGGTTACCCTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  94.1% (16/17)    IGHD3-22*01  17   ........--------------------------------------------  24
J  97.6% (40/41)    IGHJ4*02     8    -----------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_309411

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         358     4e-101
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ACTTTG	TATGTTAGTAGTGGTGATTAC	CTTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACTTTGTATGTTAGTAGTGGTGATTACCTTAACTACTTTGACTAC	ARTLYVSSGDYLNYFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  V  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_2192     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  96.0% (239/249)  IGHV4-30-4*01  49   ..................A............G.................A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  Q  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S 
                    Query_2192     91   CTGCAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGACTTACCATATCAGTAGACACGTCC  180
V  96.0% (239/249)  IGHV4-30-4*01  139  ...G......................................................A.......G.......................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  C  H  C  A  R  T  L  Y  V  S  S  G 
                    Query_2192     181  AAGAACCAGTTCTCCCTGAAGCTGAGATCTGTGACTGCCGCAGACACGGCCGTGTGTCATTGTGCCAGAACTTTGTATGTTAGTAGTGGT  270
V  96.0% (239/249)  IGHV4-30-4*01  229  ..........................C............................A.T.C.........---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.5% (19/21)    IGHD3-22*01    8    ---------------------------------------------------------------------------....A..........  22

                                        MGT-------------------->                                  
                                         D  Y  L  N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2192     271  GATTACCTTAACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  90.5% (19/21)    IGHD3-22*01    23   T.....----------------------------------------------------  28
J  100.0% (48/48)   IGHJ4*02       1    ----------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_206020

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            322     2e-90
IGHD2-2*01                                                                                            21.8    0.042
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TATGAC	AGTGGTACCAGTTGCTA	ATAC	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATATGACAGTGGTACCAGTTGCTAATACTTACTACTACTACCACGCTATGGACGCC	ARDMTVVPVANTYYYYHAMDA	234	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	44	24	14	1	9	58.3
FR2-IMGT	45	95	51	51	0	0	100
CDR2-IMGT	96	119	24	22	2	0	91.7
FR3-IMGT	120	233	114	107	7	0	93.9
CDR3-IMGT (germline)	234	241	8	8	0	0	100
Total	N/A	N/A	250	230	11	9	92


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  E  A  S  G  F  A           Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2193  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCGCCT---------ATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  81
V  92.0% (230/250)  IGHV3-7*03  47   .....................C.............A...TTAGTAGCT..........................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  N  K  D  G  S  E  K  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2193  82   AGTGGGTGGCCAACATAAACAAAGATGGAAGTGAGAAACACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCC  171
V  92.0% (230/250)  IGHV3-7*03  137  ...................GC.................T..................................................A  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------------------C
                                     Q  N  S  V  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  M  T  V  V  P  V  
                    Query_2193  172  AGAATTCAGTGTATCTGCAAATGAGTAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAGAGATATGACAGTGGTACCAGTTG  261
V  92.0% (230/250)  IGHV3-7*03  227  ....C...C...............AC..........................G.................--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.2% (15/17)    IGHD2-2*01  11   ----------------------------------------------------------------------------...A.......C..  24

                                     DR3-IMGT-------------------------->                                 
                                     A  N  T  Y  Y  Y  Y  H  A  M  D  A  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2193  262  CTAATACTTACTACTACTACCACGCTATGGACGCCTGGGGCCAAGGGACTACGGTCACCGTCTCCTCA  329
D  88.2% (15/17)    IGHD2-2*01  25   ...-----------------------------------------------------------------  27
J  93.4% (57/61)    IGHJ6*02    2    -------.............T...G........T...............C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_72387

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            336     1e-94
IGHD2-15*01                                                                                           14.1    9.0  
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	TTATGCCCAGAGTCATTTAC	GGTGGTGGCT	CCAGCTTGCTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATTTATGCCCAGAGTCATTTACGGTGGTGGCTCCAGCTTGCTCCTACGGTTTGGACGTC	AKDLCPESFTVVAPACSYGLDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	251	9	9	0	0	100
Total	N/A	N/A	251	233	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  A  G  F  S  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  Q  
                    Query_2194   1    GGTCCCTGAGACTCTCCTGTGCAGCCGCTGGATTCAGTTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCAGG  90
V  92.8% (233/251)  IGHV3-9*01   47   ..........................T.........CC.................................................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  N  S  H  S  I  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_2194   91   AGTGGGTCTCAGGTATTAATTGGAATAGTCATAGTATCGCCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAGCGCCA  180
V  92.8% (233/251)  IGHV3-9*01   137  ..................G..........GG...C..A.G............................................A.....  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  Y  L  Y  L  Q  M  N  S  L  T  P  D  D  T  A  L  Y  F  C  A  K  D  L  C  P  E  S  F  
                    Query_2194   181  AGAACTACCTATATCTGCAAATGAACAGTCTGACACCTGACGACACGGCCTTGTATTTCTGCGCAAAAGATTTATGCCCAGAGTCATTTA  270
V  92.8% (233/251)  IGHV3-9*01   227  ......C...G......................G.G....G................A...T.........-------------------  297
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                      -CDR3-IMGT--------------------------->                              
                                      T  V  V  A  P  A  C  S  Y  G  L  D  V  W  G  Q  G  T  R  V  T  V  S 
                    Query_2194   271  CGGTGGTGGCTCCAGCTTGCTCCTACGGTTTGGACGTCTGGGGCCAAGGGACCAGGGTCACCGTCTCC  338
D  90.0% (9/10)     IGHD2-15*01  14   -......A...---------------------------------------------------------  23
J  95.7% (44/46)    IGHJ6*02     14   ----------------------.......A........................C.............  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_206025

Length=410
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           433     1e-123
IGHD3-22*01                                                                                           37.2    1e-06 
IGHJ2*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGCCTTGAATTCAAGGT	GTATTACTATGATAGTGATGGTTAT	GAGG	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCGCCTTGAATTCAAGGTGTATTACTATGATAGTGATGGTTATGAGGGGTACTTCGATCTC	ARDRLEFKVYYYDSDGYEGYFDL	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	284	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_2195   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTA  90
V  97.6% (284/291)  IGHV1-46*01  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  N  P  S  G  G  T  T  S  Y  A  Q
                    Query_2195   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGTAATCAACCCTAGTGGTGGGACCACAAGCTACGCACA  180
V  97.6% (284/291)  IGHV1-46*01  96   ....................................................A...................T.G...............  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  T  T  S  T  V  Y  M  D  V  S  S  L  R  S  E  D  T  A
                    Query_2195   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGACCACGAGCACAGTCTACATGGACGTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  97.6% (284/291)  IGHV1-46*01  186  .....................................T......................GC............................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  Y  C  A  R  D  R  L  E  F  K  V  Y  Y  Y  D  S  D  G  Y  E  G  Y  F  D  L  W  G  R
                    Query_2195   271  CGTGTATTACTGTGCGAGAGACCGCCTTGAATTCAAGGTGTATTACTATGATAGTGATGGTTATGAGGGGTACTTCGATCTCTGGGGCCG  360
V  97.6% (284/291)  IGHV1-46*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  92.0% (23/25)    IGHD3-22*01  1    ---------------------------------------................AG.......--------------------------  25
J  100.0% (48/48)   IGHJ2*01     6    --------------------------------------------------------------------......................  27

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_2195   361  TGGCACCCTGGTCACTGTCTCCTCAG  386
J  100.0% (48/48)   IGHJ2*01     28   ..........................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40183344


Query= Query_206024

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD5-18*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2196   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  97.9% (238/243)  IGHV4-59*01  49   ......................................................................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  P  V  D  T  S  K  N 
                    Query_2196   91   TGGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATACCAGTAGACACGTCCAAGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  .........T...........................................................T....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_2196   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTAC  270
V  97.9% (238/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (18/20)    IGHD5-18*01  1    ----------------------------------------------------------------..........C.....T...------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2196   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_206027

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTTTATTACCT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTATTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_2197   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTTCCACTTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ..............................................................................C...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  P
                    Query_2197   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAGTCC  180
V  95.2% (277/291)  IGHV5-51*01  96   C.......G.................................................T.................A..........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_2197   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .......C.....................C...............C...........................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_2197   271  CATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTATTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD1-26*01  4    -----------------------------...G....A.....-----------------------------------------------  17
J  98.0% (48/49)    IGHJ6*02     14   ------------------------------------------------------....................................  49

                                                   
                                        T  V  S  S 
                    Query_2197   361  CACCGTCTCGTCA  373
J  98.0% (48/49)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_206026

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           360     1e-101
IGHD6-13*01                                                                                           14.1    8.4   
IGHJ5*02                                                                                              50.7    2e-10 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCCCCCTGGG	AGCACCTGGT	CCCTGCCCCGGGAGGGTGG	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCCCCTGGGAGCACCTGGTCCCTGCCCCGGGAGGGTGGCC	ATPLGAPGPCPGRVA	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	238	8	0	96.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2198   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.7% (238/246)  IGHV3-23*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  F  S  G  S  G  G  D  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_2198   91   AGTGGGTCTCACTTTTTAGTGGTAGTGGTGGTGACACATACTACGCAGACTCCGTGAGGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.7% (238/246)  IGHV3-23*01  137  ...........GC.A.................AG.......................A................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  P  L  G  A  P  G  P  
                    Query_2198   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGACCCCCCTGGGAGCACCTGGTCCCT  270
V  96.7% (238/246)  IGHV3-23*01  227  ....................................................A.............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.0% (9/10)     IGHD6-13*01  10   ----------------------------------------------------------------------------....G.....----  19

                                      ---------------->                              
                                      C  P  G  R  V  A  W  G  Q  G  T  L  V  P  L  S 
                    Query_2198   271  GCCCCGGGAGGGTGGCCTGGGGCCAGGGAACCCTGGTCCCCCTCTCC  317
J  93.8% (30/32)    IGHJ5*02     16   ---------------.......................A..G.....  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_64152

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           433     1e-123
IGHD6-6*01                                                                                            19.9    0.17  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCG	GCCTTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGGCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_2199   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  97.9% (283/289)  IGHV5-51*03  6    ..............................................................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_2199   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  97.9% (283/289)  IGHV5-51*03  96   ...................................................G............................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2199   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (283/289)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  W  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2199   271  CATGTATTACTGGGCGAGATGTATAGGAGCTCGGCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  97.9% (283/289)  IGHV5-51*03  276  ............T......----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  92.3% (12/13)    IGHD6-6*01   3    --------------------......C......--------------------------------------------------  15
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_64153

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           319     2e-89
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_2200   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  91.8% (224/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_2200   91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (224/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_2200   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGGCCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  91.8% (224/244)  IGHV4-59*08  229  ...............C...........A...................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_2200   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_64150

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*05                                                                                           344     6e-97
IGHD6-13*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*05	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	N/A	GCAGCAGATGG	CATCTCCGGGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGAGCAGCAGATGGCATCTCCGGGGTTTGACTCC	ATEQQMASPGFDS	249	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	256	8	6	2	0	75
Total	N/A	N/A	256	238	18	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_2201   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTCACGCCTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.0% (238/256)  IGHV3-15*05  47   .......T....................................A............G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  K  K  T  D  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_2201   91   AGTGGGTTGGCCGTATTAAAAAGAAGACTGACGGTGAGACAACAGACTACGCTGCGCCCGTTAAAGGCAGATTCACCATCTCAAGAGATG  180
V  93.0% (238/256)  IGHV3-15*05  137  .....................GC..A.....T....G..................A.....G............................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      D  S  K  A  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  G  V  Y  Y  C  A  T  E  Q  Q  M  A  
                    Query_2201   181  ATTCAAAAGCCACATTGTATCTGCAAATGAACAGTCTGAAAACCGAGGACACAGGTGTGTATTACTGTGCGACAGAGCAGCAGATGGCAT  270
V  93.0% (238/256)  IGHV3-15*05  227  ........AA...GC.......................................CC............A.C.....--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  90.9% (10/11)    IGHD6-13*01  8    ----------------------------------------------------------------------------.......C...---  18

                                      GT-------------->                                  
                                      S  P  G  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2201   271  CTCCGGGGTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.7% (42/43)    IGHJ4*02     6    --------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_64151

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-72*01                                                                                           353     1e-99
IGHD2-2*01                                                                                            16.1    2.4  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-72*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCTA	CGAGGGCGGGGC	GTACCAGC	CGCCCCACGAGGGGAGCTTCCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTACGAGGGCGGGGCGTACCAGCCGCCCCACGAGGGGAGCTTCCCACTACAACGCTATGGACGTC	ATRAGRTSRPTRGASHYNAMDV	249	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	110	4	0	96.5
CDR3-IMGT (germline)	249	252	4	4	0	0	100
Total	N/A	N/A	252	239	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  N  D  L  Y  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2202   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAATGACCTCTACATACACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (239/252)  IGHV3-72*01  47   ....................................C.....G.....A......GG.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  I  G  L  T  R  N  K  A  N  S  Y  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_2202   91   AGTGGATTGGCCTTACTAGAAATAAAGCTAATAGTTACACCACAGAATACGCCGCGTCTGTGAAGGGCAGATTCACCATCTCAAGAGATG  180
V  94.8% (239/252)  IGHV3-72*01  137  .....G......G.........C........C................................A.........................  226
                                      E  W  V  G  R  T  R  N  K  A  N  S  Y  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  N  S  L  F  L  Q  V  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  T  R  A  G  R  T  
                    Query_2202   181  ATTCAAAGAACTCACTGTTTCTGCAAGTGAATAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTGCTACGAGGGCGGGGCGTACCA  270
V  94.8% (239/252)  IGHV3-72*01  227  ..................A.......A....C........................................------------------  298
                                      D  S  K  N  S  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A                    
D  100.0% (8/8)     IGHD2-2*01   15   ------------------------------------------------------------------------------------......  20

                                      -------CDR3-IMGT--------------------------->                                 
                                      S  R  P  T  R  G  A  S  H  Y  N  A  M  D  V  W  G  P  G  T  T  V  S  V  S  S 
                    Query_2202   271  GCCGCCCCACGAGGGGAGCTTCCCACTACAACGCTATGGACGTCTGGGGCCCAGGGACCACGGTCAGCGTCTCCTCA  347
D  100.0% (8/8)     IGHD2-2*01   21   ..---------------------------------------------------------------------------  22
J  92.5% (49/53)    IGHJ6*02     10   ------------------------.....T...G.................A..............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_225178

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2203   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_2203   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_2203   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2203   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_64157

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           360     1e-101
IGHD6-19*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGC	TAGCAGTGGCTGGTAC	ATTTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGCTAGCAGTGGCTGGTACATTTAT	AREASSGWYIY	291	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	71	4	0	94.7
CDR1-IMGT	78	101	24	17	7	0	70.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	96	18	0	84.2
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	263	33	0	88.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  T  S  S  G  G  P  F  S 
                    Query_2204   3    CAGATGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCTTGCACGTCTTCTGGAGGCCCCTTCAGT  92
V  88.9% (263/296)  IGHV1-69*01  1    ...G..........................................................C....A.G...........A.......C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       P  F  S  V  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  F  G  T  T  N  Y 
                    Query_2204   93   CCTTTTTCTGTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTATTTTTGGTACAACAAACTAC  182
V  88.9% (263/296)  IGHV1-69*01  91   AGC.A.G..A...............................................G.............C.........G........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  Q  S  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  V  F  L  D  L  N  S  L  R  S  D  D 
                    Query_2204   183  TCACAGAGTTTCCAGGGGAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGTATTCCTGGACTTGAACAGCCTGAGATCTGACGAC  272
V  88.9% (263/296)  IGHV1-69*01  181  G......AG........C.....................................CC.A.A....GC...G...............G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------CDR3-IMGT----------->                                  
                                       S  A  I  Y  F  W  A  R  E  A  S  S  G  W  Y  I  Y  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_2204   273  TCGGCCATATATTTTTGGGCGAGAGAGGCTAGCAGTGGCTGGTACATTTATTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  357
V  88.9% (263/296)  IGHV1-69*01  271  A.....G.G....AC..T........-----------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                              
D  100.0% (16/16)   IGHD6-19*01  6    -----------------------------................----------------------------------------  21
J  97.1% (33/34)    IGHJ4*02     15   ---------------------------------------------------..................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_64154

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           308     4e-86
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTGG	AGCAGTGGCTGGT	CGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTGGAGCAGTGGCTGGTCGGTTTGACTTC	AREGGAVAGRFDF	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	224	27	0	89.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  R  G  S  V  S  S  G  G  Y  H  W  S  W  I  R  Q  T  P  G  R  G 
                    Query_2205   1    ACCCTGTCCCTCACCTGCTCTGTCTCTCGTGGCTCCGTCAGCAGTGGGGGTTATCACTGGTCCTGGATCCGGCAGACCCCAGGCAGGGGA  90
V  89.2% (224/251)  IGHV4-61*08  49   ..................A........G...................T.....CT.....AG.............C.......G.A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  F  T  G  T  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  A  D  M  S 
                    Query_2205   91   CTGGAGTGGATTGGCTATATCCACTTCACTGGGACCACCAAGTACAACCCCTCCCTTAAGAGTCGAGTCAGCATATCAGCAGACATGTCC  180
V  89.2% (224/251)  IGHV4-61*08  139  ..............G......T.T.A..G.....G......C..............C.............C........T.....C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  A  V  A  G 
                    Query_2205   181  AAGAACCAATTCTCCCTGAACCTGAGGTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTGCGAGAGAGGGTGGAGCAGTGGCTGGT  270
V  89.2% (224/251)  IGHV4-61*08  229  ........G...........G.....C..........................G..T..C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD6-19*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------->                                  
                                       R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2205   271  CGGTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02     6    ---.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_64155

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  A  S  G  G  F  I  R  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2206   1    ACCCTGTCCCTCACCTGCACTGCCTCTGGTGGCTTCATCAGAAGTGGTGGTCACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  96.8% (240/248)  IGHV4-31*03  49   ......................T...........C......C.........T...................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2206   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  96.8% (240/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_2206   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  96.8% (240/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2206   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_225174

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            308     4e-86
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGG	GTGGCTGG	ACATCTGCCT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGGGGTGGCTGGACATCTGCCTCC	TRGGGWTSAS	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	223	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  D  N  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2207   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCATGTTTGATAACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.6% (223/249)  IGHV3-7*01   47   ...............................A....CC...AG..G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  N  Q  D  G  S  E  E  H  Y  V  D  S  V  K  G  R  F  T  I  S  T  D  N  A  
                    Query_2207   91   AGTGGGTGGCCATCATCAACCAGGATGGAAGTGAGGAACACTATGTGGACTCAGTGAAGGGCCGATTCACCATCTCCACAGACAACGCCA  180
V  89.6% (223/249)  IGHV3-7*01   137  ............A...A..G..A............A..T.............T.........................G...........  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  F  L  Q  M  N  G  L  G  I  E  D  T  A  V  Y  Y  C  T  R  G  G  G  W  T  S  A  
                    Query_2207   181  AGAACACACTGTTTCTACAAATGAATGGCCTGGGAATCGAGGACACGGCTGTATATTATTGTACGAGAGGGGGTGGCTGGACATCTGCCT  270
V  89.6% (223/249)  IGHV3-7*01   227  .....T......A...G........CA.....A..GC...............G.....C...G......---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  11   ------------------------------------------------------------------------........----------  18

                                      ->                              
                                      S  W  G  Q  G  T  L  V  T  V  S 
                    Query_2207   271  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCC  302
J  100.0% (32/32)   IGHJ5*02     16   ................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_225175

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           282     4e-78
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	217	27	6	86.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_2208   4    CCCTGAGACTCTCCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.8% (217/250)  IGHV4-34*01  50   .....TCC...A..........C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_2208   94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.8% (217/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_2208   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.8% (217/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_2208   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_225176

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           357     1e-100
IGHD2-2*02                                                                                            39.1    3e-07 
IGHJ5*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAACC	ATATTGTAGTTGTTCCAGCTGCTATA	N/A	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAACCATATTGTAGTTGTTCCAGCTGCTATATGGTTCGACCCC	ARGNHIVVVPAAIWFDP	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2209   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGAGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.6% (239/250)  IGHV4-31*03  49   ...............................................T..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  N  G  S  N  Y  Y  N  P  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_2209   91   CTGGAGTGGATTGGGCACATCTATTACAATGGGAGTAACTACTACAACCCGTCCCTCAAGAGTCGAATTACCATATCAGTAGACACGTCT  180
V  95.6% (239/250)  IGHV4-31*03  139  ...............T............G......C.C............................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  Y  T  A  V  Y  Y  C  A  R  G  N  H  I  V  V  V 
                    Query_2209   181  AAGAATCAGTTCTCACTGAAGCTAAGGTCTGTGACTGCCGCGTACACGGCCGTGTATTACTGTGCGAGAGGGAACCATATTGTAGTTGTT  270
V  95.6% (239/250)  IGHV4-31*03  229  .....C........C........G..C...............G...........................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (24/26)    IGHD2-2*02   4    ----------------------------------------------------------------------------..........A..A  17

                                      MGT-------------------->                                  
                                       P  A  A  I  W  F  D  P  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_2209   271  CCAGCTGCTATATGGTTCGACCCCCGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  92.3% (24/26)    IGHD2-2*02   18   ............----------------------------------------------  29
J  97.8% (45/46)    IGHJ5*02     6    ------------............T.................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_225177

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           346     2e-97
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TAAGATATCG	AGTAGTGG	CGTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAAGATATCGAGTAGTGGCGTCGACTAC	ASKISSSGVDY	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  V  G  Y  Y  W  T  W  I  R  Q  H  P  G  K  G  
                    Query_2210   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTGTTGGTTACTACTGGACCTGGATCCGCCAGCACCCAGGCAAGGGCC  93
V  94.7% (234/247)  IGHV4-31*02  50   .....TCC...A.................................G..............G.....................G.......  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  
                    Query_2210   94   TGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCACTAGACAAGTCTA  183
V  94.7% (234/247)  IGHV4-31*02  140  .............................................................................G......C.....  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  R  F  S  L  K  L  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  S  K  I  S  S  S  G  V  
                    Query_2210   184  AGAACCGGTTCTCCCTGAAGCTGAGCTCTATGACTGCTGCGGACACGGCCGTGTACTACTGTGCGAGTAAGATATCGAGTAGTGGCGTCG  273
V  94.7% (234/247)  IGHV4-31*02  230  ......A......................G.......C.................T...........-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD3-22*01  14   -----------------------------------------------------------------------------........-----  21
J  97.5% (39/40)    IGHJ4*02     9    -----------------------------------------------------------------------------------------.  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  G  T  V  S  S  
                    Query_2210   274  ACTACTGGGGCCAGGGAACCCTGGGCACCGTCTCCTCAG  312
J  97.5% (39/40)    IGHJ4*02     10   ........................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_225170

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           310     1e-86
IGHD2-2*01                                                                                            12.2    34   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	GGACGAGG	GGACATTGCGGTAGT	GTTACCTTTTTTAATGGGAAATATGACA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGACGAGGGGACATTGCGGTAGTGTTACCTTTTTTAATGGGAAATATGACATTGACTAC	VRTRGHCGSVTFFNGKYDIDY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  D  F  T  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_2211   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAGTGACTTTACTATGCACTGGGTCCGCCAGGTTCCAGGGAAGGGACTGG  90
V  90.2% (222/246)  IGHV3-64*05  47   ............................................AG..A.G.....................C.................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  A  I  S  S  D  G  G  A  T  T  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2211   91   AATTTGTTTCAGCTATCAGTAGTGATGGGGGTGCCACAACCTACGGAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  90.2% (222/246)  IGHV3-64*05  137  ...A............T......A........AG....TA.....C............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  F  L  H  L  S  S  L  R  P  E  D  T  S  I  Y  F  C  V  R  T  R  G  H  C  G  S  
                    Query_2211   181  AGAACACACTGTTTCTTCATTTGAGCAGTCTGAGACCTGAGGACACATCTATTTATTTCTGTGTGAGGACGAGGGGACATTGCGGTAGTG  270
V  90.2% (222/246)  IGHV3-64*05  227  .......G....A.G....AA..............G..........GG..G.G....A........------------------------  292
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V                          
D  80.0% (12/15)    IGHD2-2*01   2    --------------------------------------------------------------------------...T....TA.....-  16

                                      DR3-IMGT-------------------------->                                  
                                      V  T  F  F  N  G  K  Y  D  I  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_2211   271  TTACCTTTTTTAATGGGAAATATGACATTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  339
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------.............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_225171

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           341     5e-96
IGHD2-15*01                                                                                           10.3    121  
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	T	GCTGC	GCTGTACGAAGAGG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGCTGCGCTGTACGAAGAGGACAACTGGTTCGACCCC	AKDAALYEEDNWFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  N  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2212   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAATAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-30*18  47   ....................................C.....G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  R  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_2212   91   AGTGGGTGGCAGTTATCTCATATGATGGAAGGAAGAAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCG  180
V  93.6% (234/250)  IGHV3-30*18  137  ................A..............T..T.....C...........................................A....A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  T  V  N  L  E  M  N  S  L  R  I  E  D  T  A  V  Y  Y  C  A  K  D  A  A  L  Y  E  E  
                    Query_2212   181  AGAACACGGTGAATCTGGAAATGAATAGCCTGAGAATTGAGGACACGGCTGTTTATTACTGTGCGAAAGATGCTGCGCTGTACGAAGAGG  270
V  93.6% (234/250)  IGHV3-30*18  227  ........C..T.....C.......C.........GC...............G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD2-15*01  21   -----------------------------------------------------------------------.....--------------  25

                                      ---------------->                                
                                      D  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2212   271  ACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
J  100.0% (49/49)   IGHJ5*02     1    .................................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_225173

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           382     4e-108
IGHD3-10*01                                                                                           16.1    2.6   
IGHJ4*01                                                                                              33.4    3e-05 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCATGTC	TCGGGGAG	GGGGTAGCTCGACTCCCCTCTAGTCCTATACTTCTTCAATTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCATGTCTCGGGGAGGGGGTAGCTCGACTCCCCTCTAGTCCTATACTTCTTCAATTAT	ASHVSGRG*LDSPLVLYFFNY	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	266	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  N  N  F
                    Query_2213   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAAGGATCTGGATACAGCTTTAATAATTT  90
V  92.4% (266/288)  IGHV5-51*03  6    ..............................A................................G..T................CC.GC.A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  R  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  G  T  K  Y  S  P
                    Query_2213   91   CTGGATCGCCTGGGTGCGCCAGAGGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGGTACCAAGTACAGCCC  180
V  92.4% (266/288)  IGHV5-51*03  96   ........G..............T..................................................A.....GA........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  I  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  T  S  L  K  A  T  D  S  A
                    Query_2213   181  CTCCTTCCAAGGCCAGATCACCATCTCAGCCGACAAGTCCACCAGTACCGCCTACCTGCAGTGGACTAGCCTGAAGGCCACGGACAGCGC  270
V  92.4% (266/288)  IGHV5-51*03  186  G...............G........................T...C...................GC............T......C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        M  Y  Y  C  A  S  H  V  S  G  R  G  *  L  D  S  P  L  V  L  Y  F  F  N  Y  W  G  H  V  I
                    Query_2213   271  CATGTATTATTGTGCGAGTCATGTCTCGGGGAGGGGGTAGCTCGACTCCCCTCTAGTCCTATACTTCTTCAATTATTGGGGCCATGTAAT  360
V  92.4% (266/288)  IGHV5-51*03  276  .........C........------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  100.0% (8/8)     IGHD3-10*01  14   -------------------------........---------------------------------------------------------  21
J  84.4% (27/32)    IGHJ4*01     15   ----------------------------------------------------------------------------........A.G..C  28

                                                        
                                        P  V  T  V  S  S
                    Query_2213   361  CCCCGTCACCGTCTCCTC  378
J  84.4% (27/32)    IGHJ4*01     29   ..TG..............  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_94160

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           313     2e-87
IGHD3-10*01                                                                                           16.1    2.4  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCT	TTCGGGGGGTT	CGATCTTCGGATTCACTCTTATACAGGGATATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTTCGGGGGGTTCGATCTTCGGATTCACTCTTATACAGGGATATTATGGTATGGATGTC	ARDLSGGSIFGFTLIQGYYGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  G  S  Y  V  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2214   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAATTTCGGAAGCTATGTCATGCACTGGGTCCGCCAGGCTCCAGGCAAAGGGCTGG  90
V  90.0% (225/250)  IGHV3-33*01  47   ....................................CC...A.T.......G..............................G.......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  R  Y  D  G  S  N  E  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  E  N  S  
                    Query_2214   91   AGTGGGTGGCAAATATACGGTATGATGGAAGTAATGAAAAATATGCAGACTCCGTGAAGGGCCGATTTACTATCTCCAGAGAGAATTCCA  180
V  90.0% (225/250)  IGHV3-33*01  137  ...........GT....T.................A..T.C..........................C..C...........C.......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  M  L  Y  I  Q  M  N  S  L  R  T  E  D  S  G  I  Y  Y  C  A  R  D  L  S  G  G  S  I  
                    Query_2214   181  AGAACATGCTTTATATACAGATGAACAGCCTGAGAACCGAGGACTCGGGTATATATTACTGTGCGAGAGATCTTTCGGGGGGTTCGATCT  270
V  90.0% (225/250)  IGHV3-33*01  227  ......C...G...C.G..A...............G........A...C.G.G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD3-10*01  13   -------------------------------------------------------------------------.......A...------  23

                                      --CDR3-IMGT----------------------------->                                 
                                      F  G  F  T  L  I  Q  G  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2214   271  TCGGATTCACTCTTATACAGGGATATTATGGTATGGATGTCTGGGGCCAGGGGACCACGGTCACCGTCTCCTCA  344
J  95.6% (43/45)    IGHJ6*02     18   -----------------------------........C...........A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_20100

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           319     2e-89
IGHD2-21*02                                                                                           10.3    116  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_2215   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  91.8% (224/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_2215   91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (224/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  G  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_2215   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGGCACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  91.8% (224/244)  IGHV4-59*08  229  ...............C.....................A.........G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_2215   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_94162

Length=426
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           315     6e-88
IGHD6-13*01                                                                                           31.5    6e-05
IGHJ6*02                                                                                              79.5    5e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCCATCCCGAGGGGG	TAGCAGCAGCTGGTAC	CGAAAGGGGC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCCATCCCGAGGGGGTAGCAGCAGCTGGTACCGAAAGGGGCACTTCTACGCAATGGATGTC	ASPSRGGSSSWYRKGHFYAMDV	305	370	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	115	45	20	4	21	44.4
FR2-IMGT	116	166	51	48	3	0	94.1
CDR2-IMGT	167	190	24	15	9	0	62.5
FR3-IMGT	191	304	114	102	12	0	89.5
CDR3-IMGT (germline)	305	309	5	5	0	0	100
Total	N/A	N/A	309	257	31	21	83.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-----------------CD
                                        Q  L  V  Q  S  G  A  E  V  T  K  P  G  S  S  V  K  I  S  C  K  A  S  G  G  T  F  R  S  S
                    Query_2216   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGACGAAGCCTGGGTCCTCGGTGAAGATCTCCTGCAAGGCTTCTGGAGGCACCTTCAGGTCTTC  90
V  83.2% (257/309)  IGHV1-69*01  6    ..................G..........A......................G...............................C-----  90
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S      

                                      R1-IMGT-----------------><--------------------FR2-IMGT---------------------><-------CDR2-I
                                        G  Y  N  F  G  T  Y  A  M  T  W  V  R  Q  A  P  G  Q  G  L  E  W  I  G  G  I  I  A  I  A
                    Query_2216   91   TGGATACAACTTCGGAACTTATGCCATGACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATAGGAGGGATCATCGCCATTGC  180
V  83.2% (257/309)  IGHV1-69*01  91   ----------------.GC.....T..C.G.......................................G............C.T..CTT  164
                                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F

                                      MGT------><----------------------------------------------------FR3-IMGT-------------------
                                        G  I  I  N  Y  E  Q  K  F  Q  G  R  V  T  L  S  A  D  E  S  A  N  T  A  Y  L  E  V  S  S
                    Query_2216   181  TGGAATAATAAATTACGAACAGAAGTTCCAGGGCAGAGTCACGCTTTCCGCGGACGAATCGGCGAATACAGCCTACTTGGAGGTGAGCAG  270
V  83.2% (257/309)  IGHV1-69*01  165  ...T.C.GC...C....C.........................A..A.............CA...GC.........A.....C.......  254
                                        G  T  A  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S

                                      ---------------------------------><----------------------------CDR3-IMGT------------------
                                        L  R  S  E  D  T  A  V  Y  Y  C  A  S  P  S  R  G  G  S  S  S  W  Y  R  K  G  H  F  Y  A
                    Query_2216   271  TCTGAGATCTGAGGACACGGCCGTCTATTACTGTGCGAGCCCATCCCGAGGGGGTAGCAGCAGCTGGTACCGAAAGGGGCACTTCTACGC  360
V  83.2% (257/309)  IGHV1-69*01  255  C.......................G..............---------------------------------------------------  293
                                        L  R  S  E  D  T  A  V  Y  Y  C  A                                                      
D  100.0% (16/16)   IGHD6-13*01  6    ------------------------------------------------------................--------------------  21
J  92.5% (49/53)    IGHJ6*02     10   --------------------------------------------------------------------------------...A.....G  19

                                      --------->                                 
                                        M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2216   361  AATGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  403
J  92.5% (49/53)    IGHJ6*02     20   T.....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41866416


Query= Query_20102

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           240     2e-65
IGHD2-21*02                                                                                           14.1    8.5  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CACTGAGAGGGGAGGCC	GACGGCTATT	TT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACTGAGAGGGGAGGCCGACGGCTATTTTTACTACGGTATGGACGTC	ATLRGEADGYFYYGMDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	91	23	0	79.8
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	197	44	0	81.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  N  W  S  S  S  G  Y  Y  W  N  W  V  R  Q  R  P  G  Q  G  L  E 
                    Query_2217   1    ACCCTGTCCCTCACCTGCACTGTCTACAATTGGTCCTCCAGTGGTTACTATTGGAACTGGGTACGGCAGCGCCCCGGTCAGGGGCTGGAG  90
V  81.7% (197/241)  IGHV4-34*01  49   ..................G.......TGG.G......T............C....G....A.C..C....C...A..GA...........  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  T  W  Y  N  P  T  L  E  G  R  A  T  I  S  V  G  R  S  N  N 
                    Query_2217   91   TGGATTGGCGAAATCAGTCATAGTGGGTCCACGTGGTATAATCCGACCCTCGAGGGTCGAGCCACCATATCAGTGGGCAGGTCCAACAAT  180
V  81.7% (197/241)  IGHV4-34*01  139  ........G.......A.........AAG...CAAC..C..C...T.....A..A......T............A.A..C......G..C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       V  F  S  L  R  L  T  S  V  T  A  A  D  T  S  V  Y  Y  C  A  T  L  R  G  E  A  D  G  Y  F 
                    Query_2217   181  GTCTTCTCCCTGAGGTTGACCTCCGTGACCGCCGCGGACACGTCTGTCTATTACTGTGCGACACTGAGAGGGGAGGCCGACGGCTATTTT  270
V  81.7% (197/241)  IGHV4-34*01  229  CAG..........A.C...G...T..................G....G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.0% (9/10)     IGHD2-21*02  17   ------------------------------------------------------------------------------...T......--  26

                                      ----------------->                                 
                                       Y  Y  G  M  D  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_2217   271  TACTACGGTATGGACGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCCTCA  321
J  98.0% (50/51)    IGHJ6*02     12   .................................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_40033

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHD2-21*01                                                                                           14.1    9.1  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCT	CTATTCC	ACATGAATCCGGGGGTCCCCCCGACAGACGGCGAATTCGGACCCAATAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCTCTATTCCACATGAATCCGGGGGTCCCCCCGACAGACGGCGAATTCGGACCCAATATTTTGACTAT	AKVSIPHESGGPPDRRRIRTQYFDY	243	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  A  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_2218   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACGTTTAGCAGCTACGCCCTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-23*01  47   .....................C...............C...........T...A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  D  I  S  S  S  S  G  S  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2218   91   AATGGGTCTCAGATATTAGTAGTAGTAGTGGTAGCACACACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCTA  180
V  92.8% (231/249)  IGHV3-23*01  137  .G..........C.......G.....G...........T....C............................................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  V  Y  L  Q  M  K  S  L  R  G  E  D  T  A  V  Y  Y  C  A  K  V  S  I  P  H  E  S  
                    Query_2218   181  AGAATACGGTGTATCTGCAAATGAAAAGCCTGAGAGGCGAGGACACTGCCGTATACTACTGTGCGAAAGTCTCTATTCCACATGAATCCG  270
V  92.8% (231/249)  IGHV3-23*01  227  ....C...C................C..........C.........G........T.............---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD2-21*01  22   ------------------------------------------------------------------------.......-----------  28

                                      -----CDR3-IMGT-------------------------------->                                  
                                      G  G  P  P  D  R  R  R  I  R  T  Q  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2218   271  GGGGTCCCCCCGACAGACGGCGAATTCGGACCCAATATTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  351
J  97.7% (42/43)    IGHJ4*02     6    --------------------------------------........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_94165

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     3e-90
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	242	26	6	88.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_2219   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.3% (242/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_2219   91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.3% (242/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_2219   181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.3% (242/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_2219   271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.3% (242/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_40031

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCATGGCT	TATGGTTCGGGGGGTTAT	CCTAATCCTAATC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCATGGCTTATGGTTCGGGGGGTTATCCTAATCCTAATCACTACTACTACTGCAGTATGGACGTC	ARVMAYGSGGYPNPNHYYYCSMDV	238	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	232	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2220   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (232/244)  IGHV4-59*01  49   ..................A.......................A........................................A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  D 
                    Query_2220   91   TGGATTGGCTATATCTTTCACAGCGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGGAC  180
V  95.1% (232/244)  IGHV4-59*01  139  ........G.......A.T....T.....C..........................................G..............A..  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------------C
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  M  A  Y  G  S  G  G  Y 
                    Query_2220   181  CAGTTCTCCCTGAAACTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGTCATGGCTTATGGTTCGGGGGGTTAT  270
V  95.1% (232/244)  IGHV4-59*01  229  ..............G................................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.4% (17/18)    IGHD3-10*01  8    ------------------------------------------------------------------------............A.....  25

                                      DR3-IMGT------------------------------>                                 
                                       P  N  P  N  H  Y  Y  Y  C  S  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2220   271  CCTAATCCTAATCACTACTACTACTGCAGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  342
J  96.6% (57/59)    IGHJ6*02     4    -------------............A.G............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_20106

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD3-16*01                                                                                           12.2    33   
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGG	GCCGCGAAAATCGGTCTTTGGACTACTTATCCC	TGGGGG	GGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGCCGCGAAAATCGGTCTTTGGACTACTTATCCCTGGGGGGGGCGACTGGTTCGACCCC	AKGPRKSVFGLLIPGGGDWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  D  Y  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2221   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCGATTACTATTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  94.7% (232/245)  IGHV4-34*01  49   .......................................AG.GGT..C..........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  G  A  T  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2221   91   TGGATTGGGGAAATCAATCATGGTGCAACGACCAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-34*01  139  .....................A...G..GC............C...............................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  G  P  R  K  S  V  F  G  L 
                    Query_2221   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAAAGGGCCGCGAAAATCGGTCTTTGGACTA  270
V  94.7% (232/245)  IGHV4-34*01  229  ....................C........................................G...-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      -IMGT--------------------------->                                  
                                       L  I  P  G  G  G  D  W  F  D  P  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_2221   271  CTTATCCCTGGGGGGGGCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  337
D  100.0% (6/6)     IGHD3-16*01  17   --------......-----------------------------------------------------  22
J  97.9% (47/48)    IGHJ5*02     4    -------------------................................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_94168

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           358     4e-101
IGHD5-18*01                                                                                           23.8    0.011 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	TGGATACAGCCATGG	ACCGGGGTAAGGGCGC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGATACAGCCATGGACCGGGGTAAGGGCGCTATGGACGTC	ARVDTAMDRGKGAMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  Q  G  L  
                    Query_2222   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACCTTCAGTTCCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGCAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-21*01  47   ................................T...........AG..................................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  I  S  S  S  F  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  A  
                    Query_2222   91   AGTGGGTCTCGTCCATTAGTATTAGTAGTAGTTTCATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACACCGCCA  180
V  96.0% (239/249)  IGHV3-21*01  137  ..........A..........G...........A..................................................A.....  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  D  T  A  M  D  R  
                    Query_2222   181  AGAACTCACTTTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGTGGATACAGCCATGGACCGGG  270
V  96.0% (239/249)  IGHV3-21*01  227  ..........G.........................................G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD5-18*01  2    ---------------------------------------------------------------------..........T....------  16

                                      T------------------>                                 
                                      G  K  G  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2222   271  GTAAGGGCGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  100.0% (43/43)   IGHJ6*02     20   ----------...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_94169

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           336     1e-94
IGHD7-27*01                                                                                           14.1    7.9  
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD7-27*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	CCG	CTGGGGA	N/A	ATCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACCCGCTGGGGAATC	TTRWGI	249	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	234	19	0	92.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  G  F  S  D  T  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2223   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCGGCTTCAGTGACACCTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.5% (234/253)  IGHV3-15*01  47   .......T.......................A...ACT......A..G...GG.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  V  R  T  K  T  E  G  G  T  T  D  Y  A  A  P  G  K  G  R  F  T  I  S  R  D  
                    Query_2223   91   AGTGGGTTGGCCGTGTTAGAACCAAAACTGAAGGCGGGACAACAGACTACGCTGCACCCGGCAAAGGCAGATTCACCATCTCAAGAGATG  180
V  92.5% (234/253)  IGHV3-15*01  137  ..............A...A..G.........T..T.........................TG............................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----CDR3-IMGT--->    
                                      D  S  E  S  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  R  W  G  I  W  
                    Query_2223   181  ATTCAGAAAGCACCCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACCCGCTGGGGAATCTGGG  270
V  92.5% (234/253)  IGHV3-15*01  227  .....A...A...G...........................................................-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (7/7)     IGHD7-27*01  5    ----------------------------------------------------------------------------.......-------  11
J  100.0% (37/37)   IGHJ3*02     14   -----------------------------------------------------------------------------------.......  20

                                                                    
                                      G  Q  G  T  M  V  T  V  S  S  
                    Query_2223   271  GCCAAGGGACAATGGTCACCGTCTCTTCAG  300
J  100.0% (37/37)   IGHJ3*02     21   ..............................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_144717

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCAGTGC	TATTACGATTTTTGGAGTGGT	CATC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATCCAGTGCTATTACGATTTTTGGAGTGGTCATCCTACTTCGATATGGACGTC	ARDPVLLRFLEWSSYFDMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  N  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2224   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAACAATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-33*01  47   .............................................G.T...G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  N  D  G  V  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2224   91   AATGGGTGGCAGTTATTTGGAATGATGGAGTTAAAAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCG  180
V  94.4% (236/250)  IGHV3-33*01  137  .G..............A...T........AG...T......................................................A  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      E  N  T  L  Y  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  R  D  P  V  L  L  R  F  
                    Query_2224   181  AGAACACCCTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTATATTACTGTGCGCGAGATCCAGTGCTATTACGATTTT  270
V  94.4% (236/250)  IGHV3-33*01  227  .......G............................C...............G............A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (21/21)   IGHD3-3*01   2    ------------------------------------------------------------------------------............  13

                                      R3-IMGT------------------------>                                 
                                      L  E  W  S  S  Y  F  D  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2224   271  TGGAGTGGTCATCCTACTTCGATATGGACGTCTGGGGCCAAGGGACTACGGTCACCGTCTCCTCA  335
D  100.0% (21/21)   IGHD3-3*01   14   .........--------------------------------------------------------  22
J  94.2% (49/52)    IGHJ6*02     11   -------------.....A..G........................C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_40039

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           350     8e-99
IGHD6-19*01                                                                                           12.2    33   
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTAAAGACTCCGGAGGGC	GGCTGG	C	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTAAAGACTCCGGAGGGCGGCTGGCACTACTACTACGGCTTGGACGTC	ARVKTPEGGWHYYYGLDV	242	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	28	28	0	0	100
CDR1-IMGT	29	52	24	20	4	0	83.3
FR2-IMGT	53	103	51	51	0	0	100
CDR2-IMGT	104	127	24	21	3	0	87.5
FR3-IMGT	128	241	114	110	4	0	96.5
CDR3-IMGT (germline)	242	246	5	5	0	0	100
Total	N/A	N/A	246	235	11	0	95.5


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  E
                    Query_2225   1    GTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTGACTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGA  90
V  95.5% (235/246)  IGHV3-21*01  48   ...................................C.......AG.....G.......................................  137
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E

                                      ------------><-------CDR2-IMGT------><----------------------------------------------------
                                        W  V  S  S  I  S  S  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K
                    Query_2225   91   GTGGGTCTCATCCATTAGCAGTGGGAGTAGTTACATATACTACGCAGACTCAGTAAAGGGCCGATTCACCATCTCCAGAGACAACGCCAA  180
V  95.5% (235/246)  IGHV3-21*01  138  ..................T...A.T.............................G...................................  227
                                        W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K

                                      FR3-IMGT----------------------------------------------------><----------------------CDR3-I
                                        N  S  L  Y  L  Q  I  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  K  T  P  E  G  G  W
                    Query_2225   181  GAACTCACTGTATCTGCAAATTAACAGCCTGAGAGCCGACGACACGGCTGTATATTACTGTGCGAGGGTAAAGACTCCGGAGGGCGGCTG  270
V  95.5% (235/246)  IGHV3-21*01  228  .....................G.................G...........G..............------------------------  293
                                        N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                           
D  100.0% (6/6)     IGHD6-19*01  13   -------------------------------------------------------------------------------------.....  17

                                      MGT--------------------->                                 
                                        H  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2225   271  GCACTACTACTACGGCTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  328
D  100.0% (6/6)     IGHD6-19*01  18   .---------------------------------------------------------  18
J  96.4% (54/56)    IGHJ6*02     7    --.............TA.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_40038

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           305     3e-85
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACCCCCTTTTGACTAC	ARDPAVVVQWVAGTGPPFDY	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	11	1	0	91.7
CDR1-IMGT	27	50	24	18	6	0	75
FR2-IMGT	51	101	51	51	0	0	100
CDR2-IMGT	102	125	24	17	7	0	70.8
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	233	214	19	0	91.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 
                    Query_2226   15   TGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATT  104
V  91.8% (214/233)  IGHV3-21*01  64   ...........TG.....AC........G.T....C......................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_2226   105  AGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAATTCACTGTATCTG  194
V  91.8% (214/233)  IGHV3-21*01  154  ...A.T...A.TAG.....T..A......................................................C............  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------------------CDR3-IMGT----------
                                       Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  W  V  A  G  T  G 
                    Query_2226   195  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGA  284
V  91.8% (214/233)  IGHV3-21*01  244  .................................G.G.....C...........-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (11/11)   IGHD6-19*01  11   ---------------------------------------------------------------------------...........----  21

                                      -------------->                                  
                                       P  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2226   285  CCCCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  333
J  97.7% (42/43)    IGHJ4*02     6    ------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_327580

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           349     2e-98
IGHD7-27*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GG	AACTGGG	ACAACGTAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAACTGGGACAACGTAGACTACTTTGACTAC	ARGNWDNVDYFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  N  T  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2227   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCATCTTCAATACCTATGGCATTCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-30*03  47   ......................A.............C.....G..G.........G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  D  G  T  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2227   91   AGTGGGTGGCTCTTATATCATATGATGGAACTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (236/249)  IGHV3-30*03  137  ..........AG..................G...........................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  V  Y  L  Q  M  N  S  L  K  P  E  D  T  A  V  Y  Y  C  A  R  G  N  W  D  N  V  D  
                    Query_2227   181  AGAATACGGTGTATCTGCAAATGAACAGCCTGAAACCTGAGGACACGGCTGTATATTACTGTGCGAGAGGGAACTGGGACAACGTAGACT  270
V  94.8% (236/249)  IGHV3-30*03  227  ....C...C........................G.G................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD7-27*01  3    -----------------------------------------------------------------------.......------------  9
J  100.0% (48/48)   IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2227   271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_327581

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            327     9e-92
IGHD1-26*01                                                                                           18.0    0.60 
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAACAGTTTGTTGGCACCTG	AGTGGGAGC	CTGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACAGTTTGTTGGCACCTGAGTGGGAGCCTGATGATGCTTTTGATATC	ARVNSLLAPEWEPDDAFDI	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	18	3	0	85.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  A  S  I  S  S  R  S  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_2228   1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTGGTGCCTCCATCAGCAGCAGAAGCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  92.0% (229/249)  IGHV4-4*02   47   ..A.....TCC...A..................G............T..T.A......................................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  G  G  N  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  K  S  
                    Query_2228   91   TGGAGTGGATTGGGGAGATCTATCATGGTGGGAATACCAACTACAACCCGTCCCTCAAGAGTCGACTTACTATATCAGTAGACAAGTCCA  180
V  92.0% (229/249)  IGHV4-4*02   137  ................A.........A......GC..............................G.C..C...................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  Q  F  S  L  Q  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  S  L  L  A  P  
                    Query_2228   181  AGAACCAATTCTCCCTGCAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGAGAGTTAACAGTTTGTTGGCACCTG  270
V  92.0% (229/249)  IGHV4-4*02   227  .......G.........A.......C..........................G................---------------------  295
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       

                                      -IMGT----------------------->                                  
                                      E  W  E  P  D  D  A  F  D  I  W  G  Q  G  T  L  A  I  V  S  S  
                    Query_2228   271  AGTGGGAGCCTGATGATGCTTTTGATATCTGGGGCCAAGGGACATTGGCCATCGTCTCTTCAG  333
D  100.0% (9/9)     IGHD1-26*01  6    .........------------------------------------------------------  14
J  94.0% (47/50)    IGHJ3*02     1    -------------...............................A...T..C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_327582

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     3e-90
IGHD6-19*01                                                                                           18.0    0.66 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	242	26	6	88.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_2229   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.3% (242/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_2229   91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.3% (242/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_2229   181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.3% (242/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_2229   271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.3% (242/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_327583

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           414     5e-118
IGHD2-8*01                                                                                            46.8    1e-09 
IGHJ6*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGTGCC	GGATATTGTACTAATGGTATATGCTAT	TTGTCCTA	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCGTGCCGGATATTGTACTAATGGTATATGCTATTTGTCCTAC	ARERAGYCTNGICYLSY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  G  S  Y
                    Query_2230   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCGTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCGGCAGTTA  90
V  95.5% (278/291)  IGHV1-69*01  6    ..................G.......................C.......................................A....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  M  F  E  T  A  N  Y  A  Q
                    Query_2230   91   TGTTATTACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATGTTTGAGACAGCAAACTACGCACA  180
V  95.5% (278/291)  IGHV1-69*01  96   ..C...C.G.........................................................C....GT.................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  A  S  T  N  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_2230   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGCATCCACGAACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.5% (278/291)  IGHV1-69*01  186  ...................................A........G.............................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  E  R  A  G  Y  C  T  N  G  I  C  Y  L  S  Y  W  G  Q  G  T  T  V  T  V
                    Query_2230   271  CGTGTATTATTGTGCGAGAGAGCGTGCCGGATATTGTACTAATGGTATATGCTATTTGTCCTACTGGGGCCAAGGGACCACGGTCACCGT  360
V  95.5% (278/291)  IGHV1-69*01  276  .........C...........---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  96.3% (26/27)    IGHD2-8*01   2    ----------------------------..................G........-----------------------------------  28
J  97.1% (33/34)    IGHJ6*02     29   ---------------------------------------------------------------...........................  55

                                             
                                        S  S 
                    Query_2230   361  CTCGTCA  367
J  97.1% (33/34)    IGHJ6*02     56   ...C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_327584

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           364     5e-103
IGHD6-19*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAGGGTGGGGCCCA	TATAGTAGTGGCTGGT	TCCCGTG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAGGGTGGGGCCCATATAGTAGTGGCTGGTTCCCGTGTGACTAC	ARDRGWGPYSSGWFPCDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	29	28	28	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E
                    Query_2231   2    GTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGA  91
V  96.8% (241/249)  IGHV3-30*03  48   ..........................................T.G.............................................  137
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E

                                      ------------><-------CDR2-IMGT------><----------------------------------------------------
                                        W  V  A  V  I  S  Y  D  G  S  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K
                    Query_2231   92   GTGGGTGGCAGTTATATCATATGATGGAAGTAAGAAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAA  181
V  96.8% (241/249)  IGHV3-30*03  138  .................................T.....C..................................................  227
                                        W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K

                                      FR3-IMGT----------------------------------------------------><----------------------CDR3-I
                                        D  T  L  F  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  G  W  G  P  Y  S
                    Query_2231   182  AGACACGCTGTTTCTGCAAATCAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGATAGAGGGTGGGGCCCATATAG  271
V  96.8% (241/249)  IGHV3-30*03  228  GA.........A.........G...............................................---------------------  296
                                        N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                        
D  93.8% (15/16)    IGHD6-19*01  4    -------------------------------------------------------------------------------------.....  8

                                      MGT--------------------->                                  
                                        S  G  W  F  P  C  D  Y  W  G  Q  G  N  L  V  T  V  S  S  
                    Query_2231   272  TAGTGGCTGGTTCCCGTGTGACTACTGGGGCCAGGGAAACTTGGTCACCGTCTCCTCAG  330
D  93.8% (15/16)    IGHD6-19*01  9    C..........------------------------------------------------  19
J  95.1% (39/41)    IGHJ4*02     8    ------------------....................C.C..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_327585

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD1-1*01                                                                                            12.2    31   
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCCTTCGAGGAAAC	TACAAC	N/A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCTTCGAGGAAACTACAACGATGCTTTTGATGTC	ARLLRGNYNDAFDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	231	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  H  G  E  S  F  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2232   1    ACCCTGTCCCTCACCTGCACTGTCCATGGTGAGTCCTTCAGTGGTTACTACTGGAACTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAA  90
V  95.1% (231/243)  IGHV4-34*01  49   ..................G.....T......G.......................G.................................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_2232   91   TGGATTGGGGAAATCAATCATACTGGAAGCACCAACTACAACCCGTCCCTGAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAA  180
V  95.1% (231/243)  IGHV4-34*01  139  ......................G...........................C......................................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  L  R  G  N  Y  N  D  A 
                    Query_2232   181  CAATTCTCCCTGAACCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTTCTGTGCGAGACTCCTTCGAGGAAACTACAACGATGCT  270
V  95.1% (231/243)  IGHV4-34*01  229  ..G...........G................................G....A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-1*01   3    ------------------------------------------------------------------------------......------  8
J  98.0% (48/49)    IGHJ3*01     2    ------------------------------------------------------------------------------------......  7

                                      -------->                                  
                                       F  D  V  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2232   271  TTTGATGTCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  313
J  98.0% (48/49)    IGHJ3*01     8    ........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_21276

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           366     2e-103
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GGGATCAAGAGG	TGATAGTAGTGATGATTAC	AGTGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGGGATCAAGAGGTGATAGTAGTGATGATTACAGTGGTGCTTTTGATATT	AKEGSRGDSSDDYSGAFDI	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2233   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-30*18  47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  N  N  K  Y  S  A  D  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_2233   91   AGTGGGTGGCAGTTATATCATATGATGGAAATAATAAATATTCTGCAGACTCCGTGAAGGGCCGACTCACCATTTCCAGAGACAATTCCA  180
V  96.8% (242/250)  IGHV3-30*18  137  ..............................G.........C.A......................T.......C................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  E  G  S  R  G  D  S  
                    Query_2233   181  AGAACACGCTGTATCTGCAGATGAACAGCCTGAGAGTTGAGGACACGGCTGTGTATTACTGTGCGAAAGAGGGATCAAGAGGTGATAGTA  270
V  96.8% (242/250)  IGHV3-30*18  227  ...................A................C.................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  89.5% (17/19)    IGHD3-22*01  10   ----------------------------------------------------------------------------------........  17

                                      -IMGT----------------------->                                  
                                      S  D  D  Y  S  G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2233   271  GTGATGATTACAGTGGTGCTTTTGATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  333
D  89.5% (17/19)    IGHD3-22*01  18   ...G.T.....----------------------------------------------------  28
J  97.9% (46/47)    IGHJ3*02     4    ----------------............C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_21277

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           386     1e-109
IGHD6-13*01                                                                                           14.1    8.3   
IGHJ4*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGAT	CAGCTGG	CACCCGCCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGATCAGCTGGCACCCGCCCCCTACTTTGACTAC	ARVDQLAPAPYFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	248	1	0	99.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2234   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.6% (248/249)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  L  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2234   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTTAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  99.6% (248/249)  IGHV3-21*01  137  ...................................................C......................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  D  Q  L  A  P  A  
                    Query_2234   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGTAGATCAGCTGGCACCCGCCC  270
V  99.6% (248/249)  IGHV3-21*01  227  .....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-13*01  12   --------------------------------------------------------------------------.......---------  18

                                      ------------->                                  
                                      P  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2234   271  CCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (47/47)   IGHJ4*02     2    -...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_21278

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD3-16*01                                                                                           12.2    33   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGG	GCCGCGAAAATCGGTCTTTGGACTACTTATCCC	TGGGGG	GGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGCCGCGAAAATCGGTCTTTGGACTACTTATCCCTGGGGGGGGCGACTGGTTCGACCCC	AKGPRKSVFGLLIPGGGDWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  D  Y  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2235   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCGATTACTATTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  94.7% (232/245)  IGHV4-34*01  49   .......................................AG.GGT..C..........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  G  A  T  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2235   91   TGGATTGGGGAAATCAATCATGGTGCAACGACCAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-34*01  139  .....................A...G..GC............C...............................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  G  P  R  K  S  V  F  G  L 
                    Query_2235   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAAAGGGCCGCGAAAATCGGTCTTTGGACTA  270
V  94.7% (232/245)  IGHV4-34*01  229  ....................C........................................G...-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      -IMGT--------------------------->                                  
                                       L  I  P  G  G  G  D  W  F  D  P  W  G  Q  G  T  L  I  P  V  S  S  
                    Query_2235   271  CTTATCCCTGGGGGGGGCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCCCCGTCTCCTCAG  337
D  100.0% (6/6)     IGHD3-16*01  17   --------......-----------------------------------------------------  22
J  95.8% (46/48)    IGHJ5*02     4    -------------------................................G..A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_327589

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACAGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACAGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2236   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.6% (225/243)  IGHV4-34*01  49   ................................G...T..................G...........................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  L  S  L  D  M  S  K  K 
                    Query_2236   91   TGGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGCGTCTCCTTATCATTAGACATGTCCAAGAAG  180
V  92.6% (225/243)  IGHV4-34*01  139  .............................C..................C..A.......A...A..A.....G......C.........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  V  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y 
                    Query_2236   181  CAGTTCTCCGTGAAGGTGACGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAACAGTAAAGGGGGTTATTACTGTCTAC  270
V  92.6% (225/243)  IGHV4-34*01  229  .........C.....C...GC..........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  20   --------------------------------------------------------------------------..........------  29

                                      -------------------->                                 
                                       Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2236   271  CAGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  100.0% (40/40)   IGHJ6*02     23   --------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_137798

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           319     2e-89
IGHD3-16*01                                                                                           35.3    4e-06
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCG	TATGATTACGTTTGGGGG	GCCTACCGGTGGCACAAGGCC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCGTATGATTACGTTTGGGGGGCCTACCGGTGGCACAAGGCCTTTGATATC	ARDSYDYVWGAYRWHKAFDI	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  D  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2237   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTCAGTGATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-48*03  47   ....................................CC......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  G  S  F  T  T  M  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_2237   91   AGTGGCTTTCATACATTAGTGGTAGTTTCACTACCATGTTTTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  90.8% (227/250)  IGHV3-48*03  137  .....G..............A.....GGT.G......A.AC.............................................G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  K  T  L  F  L  E  M  N  N  L  T  V  E  D  T  A  V  Y  F  C  A  R  D  S  Y  D  Y  V  W  
                    Query_2237   181  AGAAAACGCTGTTTCTGGAAATGAACAACCTGACAGTCGAGGACACGGCTGTTTATTTCTGTGCGAGAGATTCGTATGATTACGTTTGGG  270
V  90.8% (227/250)  IGHV3-48*03  227  ....CT.A....A....C.........G.....G..C....................A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-16*01  5    --------------------------------------------------------------------------................  20

                                      R3-IMGT------------------------>                                  
                                      G  A  Y  R  W  H  K  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2237   271  GGGCCTACCGGTGGCACAAGGCCTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
D  100.0% (18/18)   IGHD3-16*01  21   ..----------------------------------------------------------------  22
J  100.0% (43/43)   IGHJ3*02     8    -----------------------...........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_284180

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           428     3e-122
IGHD3-22*01                                                                                           23.8    0.012 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	282	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F
                    Query_2238   1    GCAGCTGGTGCAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTT  90
V  97.2% (282/290)  IGHV3-33*01  6    ..........G..........................................................................AG..A  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D
                    Query_2238   91   TGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGA  180
V  97.2% (282/290)  IGHV3-33*01  96   ..........................................................................................  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A
                    Query_2238   181  CTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGC  270
V  97.2% (282/290)  IGHV3-33*01  186  .....................................T...........C.......................A................  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T
                    Query_2238   271  TGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCAC  360
V  97.2% (282/290)  IGHV3-33*01  276  ...G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  88.9% (16/18)    IGHD3-22*01  5    -------------------------------..........G..G....-----------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ---------------------------------------------------....G............................GG....  39

                                                 
                                        V  S  S  
                    Query_2238   361  CGTCTCTTCAG  371
J  94.0% (47/50)    IGHJ3*02     40   ...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_284181

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           399     2e-113
IGHD4-17*01                                                                                           21.8    0.043 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGGA	GCC	ACGGTGACTAC	GTCTGGAAACTTCATAAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGAGCCACGGTGACTACGTCTGGAAACTTCATAATTTTGACTAC	ARSHGDYVWKLHNFDY	263	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	30	0	0	100
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	18	3	0	85.7
FR3-IMGT	149	262	114	110	4	0	96.5
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	269	262	7	0	97.4


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R
                    Query_2239   1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAATGTGTGTGAGCTGGATCCG  90
V  97.4% (262/269)  IGHV2-70*01  30   ..........................................................................................  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  G  V  K  F  Y  N  T  S  L  K  T  R  L  T
                    Query_2239   91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACTCATTGATTGGGATGGTGTTAAGTTCTACAATACATCTCTGAAGACCAGGCTCAC  180
V  97.4% (262/269)  IGHV2-70*01  120  ..................................................A..A...A.A.....GC.......................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  S
                    Query_2239   181  CATCTCCAAGGACACCTCCAAAAACCAAGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACGTATTACTGTGCACGGAG  270
V  97.4% (262/269)  IGHV2-70*01  210  ...........................G.............................................................-  298
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                      ------------CDR3-IMGT------------------>                                 
                                        H  G  D  Y  V  W  K  L  H  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_2239   271  CCACGGTGACTACGTCTGGAAACTTCATAATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  343
D  100.0% (11/11)   IGHD4-17*01  6    --...........------------------------------------------------------------  16
J  100.0% (42/42)   IGHJ4*02     6    -------------------------------..........................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_284182

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           371     7e-105
IGHD2-15*01                                                                                           21.8    0.043 
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGGGTATTCTGTTGC	GGTGGTAGGTGCTA	GTG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGGGTATTCTGTTGCGGTGGTAGGTGCTAGTGACAACTGGTTCGACCCC	ARHGGYSVAVVGASDNWFDP	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  I  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_2240   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATAGTATTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  97.2% (244/251)  IGHV4-39*01  49   .........................................C.G.....G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2240   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  97.2% (244/251)  IGHV4-39*01  139  ..........................................................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  V  S  L  K  L  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  H  G  G  Y  S  V  A 
                    Query_2240   181  AAGAATCAGGTCTCCCTGAAGCTGAGCTCTATGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATGGCGGGTATTCTGTTGCG  270
V  97.2% (244/251)  IGHV4-39*01  229  .....C...T....................G........................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD2-15*01  14   -----------------------------------------------------------------------------------------.  14

                                      DR3-IMGT------------------------>                                  
                                       V  V  G  A  S  D  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2240   271  GTGGTAGGTGCTAGTGACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  337
D  92.9% (13/14)    IGHD2-15*01  15   .......C.....------------------------------------------------------  27
J  100.0% (51/51)   IGHJ5*02     1    ----------------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_284183

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           375     3e-106
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2241   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.0% (245/250)  IGHV4-31*03  49   .....................G...........................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_2241   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.0% (245/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_2241   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.0% (245/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2241   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_284184

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           285     4e-79
IGHD2-8*02                                                                                            19.9    0.16 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGATGCGGCGGAGCGAAATCA	GTACTGGTGG	GG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATGCGGCGGAGCGAAATCAGTACTGGTGGGGACTACTTTGACCGC	ARMRRSEISTGGDYFDR	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  V  P  Y  L  W  S  W  V  R  Q  H  P  V  K  G 
                    Query_2242   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATAAGAAGTGTTCCTTACCTCTGGAGCTGGGTCCGCCAGCACCCAGTGAAGGGC  90
V  87.0% (214/246)  IGHV4-31*03  49   ......................................C..C....G.GG....TA..........A...............G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  Y  M  Y  Y  S  G  S  N  R  Y  N  P  S  L  K  S  R  V  S  M  S  L  D  T  S 
                    Query_2242   91   CTGGAGTGGATTGCATACATGTACTACAGTGGGAGTAATCGCTACAACCCGTCCCTCAAGAGTCGAGTTTCCATGTCGCTAGACACGTCT  180
V  87.0% (214/246)  IGHV4-31*03  139  .............GG.....C..T...........C.CCTA............................A....A..AG...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       R  N  Q  F  S  L  R  L  T  P  M  T  A  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  I  S 
                    Query_2242   181  AGGAACCAGTTCTCCCTAAGGCTGACCCCTATGACGGCCGCGGACACGGCCATCTACTACTGTGCGCGGATGCGGCGGAGCGAAATCAGT  270
V  87.0% (214/246)  IGHV4-31*03  229  .A...............G.A.....G.T..G....T...............G.G..T.........------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (10/10)   IGHD2-8*02   9    ----------------------------------------------------------------------------------------..  10

                                      MGT-------------------->                                  
                                       T  G  G  D  Y  F  D  R  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_2242   271  ACTGGTGGGGACTACTTTGACCGCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  328
D  100.0% (10/10)   IGHD2-8*02   11   ........--------------------------------------------------  18
J  91.7% (44/48)    IGHJ4*02     1    ----------...........TA.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_284186

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           358     3e-101
IGHD3-16*01                                                                                           12.2    30    
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTTTCC	TGGGGG	N/A	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTCCTGGGGGTGCTTATGATATC	ARHFPGGAYDI	237	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	26	25	25	0	0	100
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	50	1	0	98
CDR2-IMGT	102	122	21	20	1	0	95.2
FR3-IMGT	123	236	114	111	3	0	97.4
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	243	236	7	0	97.1


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  F  C  S  W  I  R  Q  P  P  G  K  G  L  E  W
                    Query_2243   2    CCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTTCTGCAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTG  91
V  97.1% (236/243)  IGHV4-59*08  51   .............................G.................A...G......................................  140
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W

                                      ---------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IM
                                        I  G  Y  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q
                    Query_2243   92   GATTGGGTATATCTCTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAACCA  181
V  97.1% (236/243)  IGHV4-59*08  141  ..............A.........................................................A.................  230
                                        I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q

                                      GT----------------------------------------------------><-----------CDR3-IMGT----------->  
                                        F  S  L  K  L  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  H  F  P  G  G  A  Y  D  I  W
                    Query_2243   182  GTTCTCCCTGAAGCTGACCTCTGTGTCCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATTTTCCTGGGGGTGCTTATGATATCTG  271
V  97.1% (236/243)  IGHV4-59*08  231  .................G.......A.....................................---------------------------  293
                                        F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                              
D  100.0% (6/6)     IGHD3-16*01  17   ---------------------------------------------------------------------......---------------  22
J  97.9% (46/47)    IGHJ3*02     4    ---------------------------------------------------------------------------.....T.........  18

                                                                      
                                        G  Q  G  T  M  V  T  V  S  S  
                    Query_2243   272  GGGCCAAGGGACAATGGTCACCGTCTCTTCAG  303
J  97.9% (46/47)    IGHJ3*02     19   ................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_284187

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TG	ACGATTTTTGGAGTGG	CCCCGTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACGATTTTTGGAGTGGCCCCGTCCTACTTTGACTCC	ARVTIFGVAPSYFDS	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  H  T  R  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_2244   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCACACTCGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*01  49   ....................................AT..G.A..........................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2244   91   TGGATTGGGTATATCCATTACAGTGGGAGCACCAATTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAT  180
V  95.9% (234/244)  IGHV4-59*01  139  ...............T...................C.....C...............................................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  T  I  F  G  V  A  P  S 
                    Query_2244   181  CAGTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTGACGATTTTTGGAGTGGCCCCGTCC  270
V  95.9% (234/244)  IGHV4-59*01  229  ...............C................................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (16/16)   IGHD3-3*01   6    ------------------------------------------------------------------................--------  21
J  95.7% (45/47)    IGHJ4*02     2    -----------------------------------------------------------------------------------------.  2

                                      ----------->                                  
                                       Y  F  D  S  W  A  Q  G  T  L  V  T  V  S  S  
                    Query_2244   271  TACTTTGACTCCTGGGCCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.7% (45/47)    IGHJ4*02     3    ..........A.....G.............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_284188

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43D*01                                                                                          358     4e-101
IGHD1-26*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              106     3e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43D*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAA	GGCAAC	GTATAGTGGGACCTACTA	TCCGAATAG	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGGCAACGTATAGTGGGACCTACTATCCGAATAGTTACTACTACTACAACGCTATGGACGTC	AKATYSGTYYPNSYYYYNAMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  A  L  
                    Query_2245    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCGGGGAAGGCTCTCG  90
V  96.4% (238/247)  IGHV3-43D*01  47   ....................................................................................G...G.  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  S  L  I  T  W  G  P  V  S  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_2245    91   AGTGGGTCTCTCTTATTACTTGGGGTCCTGTTAGCACATACTATGCAGACTCTGTGAGGGGTCGATTCACCATCTCCAGAGACAACAGCA  180
V  96.4% (238/247)  IGHV3-43D*01  137  ..................G.....A.GG..G......C...................A................................  226
                                       E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><---------------------------
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  A  T  Y  S  G  T  Y  
                    Query_2245    181  AAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACCGCCTTGTATTACTGTGCAAAGGCAACGTATAGTGGGACCTACT  270
V  96.4% (238/247)  IGHV3-43D*01  227  ...................................................................-----------------------  293
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  94.4% (17/18)    IGHD1-26*01   2    -------------------------------------------------------------------------...........G.....  18

                                       -CDR3-IMGT--------------------------->                                 
                                       Y  P  N  S  Y  Y  Y  Y  N  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2245    271  ATCCGAATAGTTACTACTACTACAACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  94.4% (17/18)    IGHD1-26*01   19   .----------------------------------------------------------------------  19
J  96.7% (59/61)    IGHJ6*02      2    ----------.............T...G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_284189

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            269     2e-74
IGHD2-15*01                                                                                           16.1    2.3  
IGHJ4*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-15*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGAGATGCTATAACAACG	GCTGCTAC	GGGGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACCGAGATGCTATAACAACGGCTGCTACGGGGGGCTACTTTGATAAC	AKDRDAITTAATGGYFDN	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	11	13	0	45.8
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	211	39	0	84.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  I  F  G  H  Y  V  M  H  W  V  R  Q  R  P  G  K  G  L  
                    Query_2246   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCATTTTTGGTCATTATGTCATGCACTGGGTCCGGCAACGTCCGGGGAAGGGCCTGG  90
V  84.4% (211/250)  IGHV3-9*01   47   .....................C..............CC....A.G......C...................GC...A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  L  G  Y  D  D  V  P  V  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  A  
                    Query_2246   91   AGTGGGTCGCAGGTCTTGGCTACGATGATGTTCCCGTGGGTTATGCGGATTCTGTGAAGGGGCGATTCACCATATCCAGAGACACCGCCG  180
V  84.4% (211/250)  IGHV3-9*01   137  ........T.....A..A.T.GGA..AG..G.AG.A.A..C........C...........C...........C..........A....A  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      V  R  S  L  Y  L  Q  M  D  S  L  R  P  D  D  T  A  F  Y  Y  C  A  K  D  R  D  A  I  T  T  
                    Query_2246   181  TGAGGTCCCTCTATCTGCAGATGGACAGTCTGCGACCTGACGACACGGCCTTCTATTACTGTGCAAAAGACCGAGATGCTATAACAACGG  270
V  84.4% (211/250)  IGHV3-9*01   227  A..AC.....G........A...A........A..G....G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD2-15*01  21   -----------------------------------------------------------------------------------------.  21

                                      IMGT--------------------->                                  
                                      A  A  T  G  G  Y  F  D  N  W  G  H  G  V  L  V  T  V  A  S  
                    Query_2246   271  CTGCTACGGGGGGCTACTTTGATAACTGGGGCCACGGAGTCCTGGTCACCGTCGCCTCAG  330
D  100.0% (8/8)     IGHD2-15*01  22   .......-----------------------------------------------------  28
J  87.2% (41/47)    IGHJ4*01     2    -------------.........CT..........A...AC.............T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_274163

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           353     1e-99
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCCGAG	GTATTACTATGAGAGTAGTAGTTAT	CAGTACAAGGCCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCCGAGGTATTACTATGAGAGTAGTAGTTATCAGTACAAGGCCTACTACTTTGACTAC	AKDPRYYYESSSYQYKAYYFDY	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  V  
                    Query_2247   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGGTGG  90
V  95.2% (238/250)  IGHV3-30*18  47   ........................C.....................C.......................................C...  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  E  G  S  E  T  S  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2247   91   AGTGGGTTGCAGTTATATCATATGAAGGAAGTGAGACATCCTATGCAGCCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (238/250)  IGHV3-30*18  137  .......G.................T......A.T.A..A........A.........................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  P  R  Y  Y  Y  E  
                    Query_2247   181  AGAACACGCTGTCTCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTCTATTACTGTGCGAAAGATCCGAGGTATTACTATGAGA  270
V  95.2% (238/250)  IGHV3-30*18  227  ............A.......................................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.0% (23/25)    IGHD3-22*01  1    ----------------------------------------------------------------------------............T.  14

                                      -CDR3-IMGT--------------------------->                                  
                                      S  S  S  Y  Q  Y  K  A  Y  Y  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_2247   271  GTAGTAGTTATCAGTACAAGGCCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  342
D  92.0% (23/25)    IGHD3-22*01  15   .....G.....-------------------------------------------------------------  25
J  97.9% (47/48)    IGHJ4*02     1    ------------------------...................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_274165

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           385     4e-109
IGHD1-1*01                                                                                            14.1    9.2   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAGGGGG	CAACTGG	GACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTAC	ARGGGNWDPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	267	21	0	92.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  Q  I  S  C  K  G  S  G  Y  S  F  A  N  Y
                    Query_2248   1    GCAGCTGGTGCAGTCTGGAGCAGAACTGAAAAAGCCGGGGGAGTCTCTGCAGATCTCCTGTAAGGGGTCTGGATACAGCTTCGCCAACTA  90
V  92.7% (267/288)  IGHV5-51*03  6    ........................GG.......................A................T..............TA...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  V  V  Y  P  D  D  S  D  A  R  Y  S  P
                    Query_2248   91   CTGGATCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGGTCGTCTATCCTGATGACTCTGATGCCAGATACAGCCC  180
V  92.7% (267/288)  IGHV5-51*03  96   ..................C..G.........A..........G.........A..A.........G..........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  I  T  I  S  A  D  K  S  I  S  T  A  F  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_2248   181  GTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACACCGC  270
V  92.7% (267/288)  IGHV5-51*03  186  .......C.......GG....................................A...........G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  G  N  W  D  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2248   271  CATCTATTACTGTGCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.7% (267/288)  IGHV5-51*03  276  ...G..............-----------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------.......-------------------------------------------------  11
J  100.0% (44/44)   IGHJ4*02     5    ---------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_274164

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           422     2e-120
IGHD1-7*01                                                                                            12.2    35    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCTG	GGAACT	CCTGACA	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCTGGGAACTCCTGACAACTCC	ARELGTPDNS	291	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	71	4	0	94.7
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	283	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  Q  K  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_2249   3    CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGCAGAAGCCTGGGGCCTCAATGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACC  92
V  95.6% (283/296)  IGHV1-46*01  1    .....G.....G.....................A.................G......................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  L  I  N  P  S  G  G  S  T  N  Y 
                    Query_2249   93   AGATACTATATGCACTGGGTGCGGCAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACTAATCAACCCTAGTGGTGGTAGCACGAATTAC  182
V  95.6% (283/296)  IGHV1-46*01  91   ..C....................A.................................A.........................A.GC...  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  D  L  S  R  L  R  S  E  D 
                    Query_2249   183  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGACCTGAGCAGGCTGAGATCTGAGGAC  272
V  95.6% (283/296)  IGHV1-46*01  181  .................................................................G........C...............  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------CDR3-IMGT--------->                                  
                                       T  A  M  Y  Y  C  A  R  E  L  G  T  P  D  N  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2249   273  ACGGCCATGTATTACTGTGCGAGAGAGCTGGGAACTCCTGACAACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  354
V  95.6% (283/296)  IGHV1-46*01  271  ......G...................--------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                           
D  100.0% (6/6)     IGHD1-7*01   10   ------------------------------......----------------------------------------------  15
J  97.4% (38/39)    IGHJ4*02     10   -------------------------------------------...A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_272941

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           327     9e-92
IGHD3-22*01                                                                                           21.8    0.041
IGHJ2*01                                                                                              16.1    5.0  


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGGTTT	TAGTAGTGCTTATT	CCTGGCTTAAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGTTTTAGTAGTGCTTATTCCTGGCTTAATTACTTCGA	AKGFSSAYSWLNYF	243	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	228	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  S  S  G  F  T  F  S  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2250   1    GGTCCCTGAGACTCTCCTGTGCAAGCTCCGGATTCACCTTTAGCGATTATGGCATGAGTTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  92.3% (228/247)  IGHV3-23*01  47   .......................GC...T...............AGC....C......C...........G...................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  A  G  T  N  T  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_2250   91   AGTGGGTCTCAGGTATTAGTGGTGCTGGTACTAACACATACTACGCAGACTCCGTGCAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.3% (228/247)  IGHV3-23*01  137  ............C..........AG....GG..G......................A.................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  G  F  S  S  A  Y  S  
                    Query_2250   181  AGAACACGCTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTTCTGTGCGAAGGGTTTTAGTAGTGCTTATTCCT  270
V  92.3% (228/247)  IGHV3-23*01  227  ............A.......................................A....A.........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD3-22*01  13   -------------------------------------------------------------------------........G.....---  26

                                      --------------->
                                      W  L  N  Y  F   
                    Query_2250   271  GGCTTAATTACTTCGA  286
J  100.0% (8/8)     IGHJ2*01     8    --------........  15


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_352487

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           367     5e-104
IGHD3-16*01                                                                                           12.2    31    
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATTTTCC	TGGGGG	N/A	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTCCTGGGGGTGCTTATGATATC	ARHFPGGAYDI	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2251   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.2% (242/249)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  G  T  S 
                    Query_2251   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGGCACGTCT  180
V  97.2% (242/249)  IGHV4-31*03  139  .....G.........T.C................................................................A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  F  P  G  G  A  Y 
                    Query_2251   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATTTTCCTGGGGGTGCTTAT  270
V  97.2% (242/249)  IGHV4-31*03  229  .....................................................................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-16*01  17   -----------------------------------------------------------------------------......-------  22
J  97.9% (46/47)    IGHJ3*02     4    -----------------------------------------------------------------------------------.....T.  10

                                      ----->                                  
                                       D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2251   271  GATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  310
J  97.9% (46/47)    IGHJ3*02     11   ........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_352486

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           344     6e-97
IGHD5-18*01                                                                                           14.1    8.9  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCAGC	ATACATCTCTGGT	CACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAGCATACATCTCTGGTCACCCCTAC	SAYISGHPY	281	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	166	21	15	6	0	71.4
FR3-IMGT	167	280	114	102	12	0	89.5
Total	N/A	N/A	280	250	30	0	89.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  P  V  S  V  H
                    Query_2252   1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGCGACTCTCCTGTGCAGCCTCTGGATTCCCCGTCAGTGTACA  90
V  89.3% (250/280)  IGHV3-53*01  6    ..........G......................................A......................G...A........AGCA.  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  S  W  V  R  Q  A  P  G  R  G  L  E  W  V  S  A  I  L  T  S  G  K  T  Y  Y  T  D  S
                    Query_2252   91   CTACATGAGCTGGGTCCGCCAGGCTCCAGGGAGGGGACTGGAGTGGGTCTCAGCGATTCTTACCAGTGGTAAGACATACTACACAGACTC  180
V  89.3% (250/280)  IGHV3-53*01  96   ................................A...G................TT...TA..G.G......GC.........G.......  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        A  M  G  R  F  T  I  S  R  D  S  S  K  N  T  V  N  L  Q  M  N  S  L  S  A  G  D  T  A  F
                    Query_2252   181  CGCGATGGGCCGATTCACCATCTCCAGAGACTCTTCCAAGAACACAGTGAATCTTCAAATGAACAGCCTGAGCGCCGGGGACACGGCCTT  270
V  89.3% (250/280)  IGHV3-53*01  186  ..T..A.........................AA............GC..T......................A....A..........G.  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><--------CDR3-IMGT-------->                                  
                                        Y  Y  C  S  A  Y  I  S  G  H  P  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2252   271  CTATTACTGTTCAGCATACATCTCTGGTCACCCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  341
V  89.3% (250/280)  IGHV3-53*01  276  G.........-------------------------------------------------------------  285
                                        Y  Y  C                                                              
D  84.6% (11/13)    IGHD5-18*01  5    ---------------.....G..A....-------------------------------------------  17
J  100.0% (38/38)   IGHJ4*02     11   ---------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_272943

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           360     1e-101
IGHD2-21*01                                                                                           12.2    31    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGAACCCCG	TATTCC	CGTCGCCA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGATGAACCCCGTATTCCCGTCGCCAAC	VRDEPRIPVAN	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  T  V  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2253   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCACTGTTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-48*03  47   ....................................C.....G.AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  G  G  S  T  I  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_2253   91   AGTGGGTTTCATACATTAGTAGTGGTGGTTCTACCATATACTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-48*03  137  .......................A.....AG..........................A................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  E  P  R  I  P  V  
                    Query_2253   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGTGCGAGATGAACCCCGTATTCCCGTCG  270
V  96.0% (240/250)  IGHV3-48*03  227  ...............................................................C.A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*01  23   -------------------------------------------------------------------------------......-----  28

                                      ---->                                  
                                      A  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2253   271  CCAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (36/36)   IGHJ4*02     13   ---....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_4027

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           344     6e-97
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGACGTGCGCACTCAA	GGGGGA	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGACGTGCGCACTCAAGGGGGATTGACTAC	ARDLGRAHSRGIDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  N  N  H  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2254   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGCTTCAATAACCATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-33*01  47   ....................................C.....G..G.T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  S  R  R  Y  Y  S  D  S  V  R  G  Q  F  T  I  S  R  D  N  S  
                    Query_2254   91   AGTGGGTGGCAATTATTTGGTATGATGGAAGTCGTAGATACTATTCAGACTCCGTGAGGGGCCAATTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-33*01  137  ...........G....A...............AA..A.......G............A.....G..........................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  S  A  E  D  T  A  I  Y  Y  C  A  R  D  L  G  R  A  H  S  
                    Query_2254   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGCGCCGAGGACACGGCTATATATTACTGTGCGAGAGATCTTGGACGTGCGCACTCAA  270
V  94.0% (235/250)  IGHV3-33*01  227  ..................................A...............G.G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ------------->                                 
                                      R  G  I  D  Y  W  G  L  G  T  L  V  T  V  S  S 
                    Query_2254   271  GGGGGATTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCA  317
D  100.0% (6/6)     IGHD3-16*01  18   ......-----------------------------------------  23
J  97.6% (40/41)    IGHJ4*02     7    ------...............A.........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_4026

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           350     8e-99
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCACTC	CTATGGATCGGGGAGTTGTTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTCCTATGGATCGGGGAGTTGTTATGCTCAAGAC	ARGHSYGSGSCYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2255   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_2255   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTGGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*03  139  ..................................G.................................T.....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  G  H  S  Y  G  S  G 
                    Query_2255   181  AAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTTTTACTGCGCGAGAGGTCACTCCTATGGATCGGGG  270
V  94.8% (237/250)  IGHV4-31*03  229  .....................C...G...........................G.A......T.......--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (20/22)    IGHD3-10*01  7    -----------------------------------------------------------------------------......T......  19

                                      ----------------->                                  
                                       S  C  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2255   271  AGTTGTTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  90.9% (20/22)    IGHD3-10*01  20   ....A....-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_4025

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	216	29	0	88.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_2256   1    ACCCTGTCCCTCACCTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  88.2% (216/245)  IGHV4-34*01  49   .......................CTA..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_2256   91   TGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAA  180
V  88.2% (216/245)  IGHV4-34*01  139  ................A............CA.C.AC......C..T......A...............A....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W 
                    Query_2256   181  CAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCTGGCGAAGACAGCGCAACTGG  270
V  88.2% (216/245)  IGHV4-34*01  229  ..GT...........C..A......T.....................G.....C......A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (49/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------.......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2256   271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (49/50)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_60700

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           330     1e-92
IGHD6-19*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GCGG	AGCAGGGGCT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGAGGCGGAGCAGGGGCTTACTATTACGGTATGGACGTC	SRGGAGAYYYGMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  G  A  S  G  F  T  F  S  R  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2257   1    GGTCCCTGAGACTCTCCTGTGGAGCCTCTGGATTCACCTTCAGTAGATATTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTCG  90
V  92.4% (230/249)  IGHV3-74*01  47   .....................C........................C..C......................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  S  S  D  G  G  S  K  H  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2257   91   TGTGGGTCTCACGCATTAGTAGTGATGGAGGTAGCAAACACTCCGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (230/249)  IGHV3-74*01  137  .............T....A.........GA......C.AG..A...............................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  F  C  S  R  G  G  A  G  A  Y  Y  
                    Query_2257   181  AGAACACACTCTATCTGCAAATGAACAGTCTGAGAGCCGACGACACGGCTGTCTATTTTTGTTCAAGAGGCGGAGCAGGGGCTTACTATT  270
V  92.4% (230/249)  IGHV3-74*01  227  .......G..G.............................G...........G....AC...G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD6-19*01  7    -------------------------------------------------------------------------.....T....-------  16
J  96.3% (52/54)    IGHJ6*02     9    -----------------------------------------------------------------------------------.....C.  15

                                      ------------->                                 
                                      Y  G  M  D  V  W  G  P  G  T  T  V  T  V  S  S 
                    Query_2257   271  ACGGTATGGACGTCTGGGGCCCAGGGACCACGGTCACCGTCTCCTCA  317
J  96.3% (52/54)    IGHJ6*02     16   .....................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_4023

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD2-21*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGGGGG	ATTGTGATGGT	ATTAACTGCTTCCCCTGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGGATTGTGATGGTATTAACTGCTTCCCCTGGTACTACTATTATGGAATGCACGTC	AKGDCDGINCFPWYYYYGMHV	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	221	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  L  Y  G  G  S  F  S  G  H  Y  W  I  W  L  R  Q  S  P  G  K  G  L  E 
                    Query_2258   1    ACCCTGTCCCTCACCTGCGCTCTCTATGGTGGGTCCTTCAGTGGTCACTACTGGATTTGGCTCCGCCAGTCCCCCGGGAAGGGGCTGGAG  90
V  91.7% (221/241)  IGHV4-34*01  49   .....................G.......................T.........GC...A........C....A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  K  Y  N  S  S  L  K  S  R  V  A  M  S  I  D  A  S  K  S 
                    Query_2258   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACGAAGTACAACTCGTCCCTCAAGAGTCGAGTCGCCATGTCAATAGACGCGTCCAAGAGT  180
V  91.7% (221/241)  IGHV4-34*01  139  ................................C..C......C....................A....A...G.....A.........AC  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  Y  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  G  D  C  D  G  I  N  C  F 
                    Query_2258   181  CAATTCTACCTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAAGGGGGATTGTGATGGTATTAACTGCTTC  270
V  91.7% (221/241)  IGHV4-34*01  229  ..G....C...........G...........................G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (10/11)    IGHD2-21*01  6    -------------------------------------------------------------------......G....------------  16

                                      MGT-------------------------->                                 
                                       P  W  Y  Y  Y  Y  G  M  H  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_2258   271  CCCTGGTACTACTATTATGGAATGCACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  333
J  91.2% (52/57)    IGHJ6*02     6    ------........C..C..T...G...........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_60706

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         346     2e-97
IGHD2-2*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	GGGACATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	245	2	2	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_2259     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  95.1% (233/245)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  H  S  G  L  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  R  S 
                    Query_2259     91   CTGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTGGACAGGTCC  180
V  95.1% (233/245)  IGHV4-30-2*01  139  ..............G......T...........AG..C.T...A......................G.............A.........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T 
                    Query_2259     181  AAGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACT  270
V  95.1% (233/245)  IGHV4-30-2*01  229  ...........C.......A......................................A......-------------------------  293
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  83.3% (10/12)    IGHD2-2*01     13   -------------------------------------------------------------------------.....C..G...-----  24

                                        -------------->                                  
                                         R  G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_2259     271  CGGGGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  319
J  93.0% (40/43)    IGHJ4*02       6    ------.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_4021

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD2-2*01                                                                                            18.0    0.58 
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGTC	TGTAGTAGT	GACAGGTGCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGTCTGTAGTAGTGACAGGTGCCACTACGAGATGGACATC	ESRL***QVPLRDGH	239	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	52	25	17	7	1	68
FR2-IMGT	53	103	51	48	3	0	94.1
CDR2-IMGT	104	124	21	20	1	0	95.2
FR3-IMGT	125	238	114	106	8	0	93
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	245	225	19	1	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT-------><--------------------FR2-IMGT---------
                                       T  L  S  L  T  C  T  V  S  G  A  P  P  Q  *  S  L  L  E  L  D  P  A  V  P  W  E  G  T  G 
                    Query_2260   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCCCCCCTCAATGATCACTACTGGAGCTGGATCCGGCTGTCCCCTGGGAAGGGACTGGA  90
V  91.8% (225/245)  IGHV4-59*01  49   ...............................G.T..A-...G.AG.T.....................A.C....A..............  137
                                       T  L  S  L  T  C  T  V  S  G  G  S   I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E

                                      ------------><-----CDR2-IMGT-----><----------------------------------------------------FR3
                                       V  D  W  V  Y  L  L  Q  G  E  H  Q  V  Q  P  L  L  Q  E  S  G  H  H  I  S  *  L  V  Q  E 
                    Query_2260   91   GTGGATTGGGTATATCTATTACAGGGGGAGCACCAAGTACAACCCCTCCTTCAAGAGTCGGGTCACCATATCAGTTGACTCGTCCAAGAA  180
V  91.8% (225/245)  IGHV4-59*01  138  ........................T...........C............C..........A..............A...A..........  227
                                        W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N

                                      -IMGT----------------------------------------------------><-------------------CDR3-IMGT---
                                       P  V  L  P  E  S  E  L  C  D  R  C  G  H  G  R  I  L  L  C  E  S  R  L  *  *  *  Q  V  P 
                    Query_2260   181  CCAGTTCTCCCTGAATCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTATGCGAGAGTCGTCTGTAGTAGTGACAGGTGCCA  270
V  91.8% (225/245)  IGHV4-59*01  228  ...............G................................G.......G........-------------------------  292
                                        Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                           
D  100.0% (9/9)     IGHD2-2*01   8    ----------------------------------------------------------------------.........-----------  16
J  92.0% (46/50)    IGHJ6*02     13   -----------------------------------------------------------------------------------------.  13

                                      --------------->                                 
                                       L  R  D  G  H  L  G  P  R  D  L  G  H  R  L  L  
                    Query_2260   271  CTACGAGATGGACATCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  319
J  92.0% (46/50)    IGHJ6*02     14   .....GT......G.................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_60704

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           380     1e-107
IGHD1-26*01                                                                                           23.8    0.013 
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGATA	TATAGTGGGAGC	ACCGGGGC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATATATAGTGGGAGCACCGGGGCCTATTACTTCTACGGTATGGATGTC	ARIYSGSTGAYYFYGMDV	292	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	104	10	0	91.2
CDR3-IMGT (germline)	292	294	3	3	0	0	100
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  L  S 
                    Query_2261   4    CAGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCCTCAGT  93
V  91.8% (267/291)  IGHV1-69*06  1    .......................G..T.........................................................T....C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  H  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  I  P  N  V  G  T  A  N  Y 
                    Query_2261   94   AGGCATGGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGTATCATCCCAAATGTTGGTACAGCAAACTAC  183
V  91.8% (267/291)  IGHV1-69*06  91   ..CT...C......C..........................................G.G........T.TCT.................  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  D  R  V  T  I  T  A  D  T  S  S  S  T  V  Y  M  G  L  S  S  L  R  S  E  D 
                    Query_2261   184  GCACAGAAATTCCAGGACAGAGTCACGATTACCGCGGACACATCTTCGAGCACAGTCTACATGGGGCTGAGCAGCCTGAGATCTGAGGAC  273
V  91.8% (267/291)  IGHV1-69*06  181  ........G.......G.......................A...CA.........C........A.........................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  T  Y  Y  C  A  R  I  Y  S  G  S  T  G  A  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T 
                    Query_2261   274  ACGGCCACTTATTACTGTGCGCGGATATATAGTGGGAGCACCGGGGCCTATTACTTCTACGGTATGGATGTCTGGGGCCAAGGGACCACG  363
V  91.8% (267/291)  IGHV1-69*06  271  ......GTG............---------------------------------------------------------------------  291
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (12/12)   IGHD1-26*01  3    ---------------------------............---------------------------------------------------  14
J  94.8% (55/58)    IGHJ6*02     5    -----------------------------------------------...C....A............C.....................  47

                                                     
                                       V  T  V  S  S 
                    Query_2261   364  GTCACCGTCTCCTCA  378
J  94.8% (55/58)    IGHJ6*02     48   ...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_272945

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           341     5e-96
IGHD3-3*01                                                                                            12.2    32   
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	GAT	GAGTGG	CAACTATCCAGAGGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGATGAGTGGCAACTATCCAGAGGGGTACTTTGACCAC	TMSGNYPEGYFDH	249	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	250	2	2	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  T  S  G  F  T  F  S  D  H  T  L  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2262   1    GGTCCCTGAGACTCTCCTGTTCAACTTCTGGATTCACCTTTAGTGATCATACTCTGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-49*04  47   ....................A..G.................G.....T..G..A...G................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  R  A  Y  G  G  T  T  E  Y  A  A  S  L  K  G  G  F  T  I  S  R  D  
                    Query_2262   91   AGTGGGTAGGTTTCATCAGAAGCAGAGCTTATGGTGGGACAACAGAATACGCCGCGTCTCTGAAAGGCGGATTCACCATCTCAAGAGATG  180
V  93.6% (234/250)  IGHV3-49*04  137  ................T.......A..................................G........A.....................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      D  S  N  S  I  A  Y  L  Q  M  N  S  L  K  I  E  D  T  G  V  Y  Y  C  T  M  S  G  N  Y  P  
                    Query_2262   181  ATTCCAACAGCATCGCCTATCTGCAAATGAACAGCCTGAAAATCGAGGACACAGGCGTTTATTATTGTACGATGAGTGGCAACTATCCAG  270
V  93.6% (234/250)  IGHV3-49*04  227  .......A..................................C...........C...G.....C.....--------------------  296
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (6/6)     IGHD3-3*01   16   -------------------------------------------------------------------------......-----------  21

                                      GT-------------->                                  
                                      E  G  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2262   271  AGGGGTACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.8% (45/46)    IGHJ4*02     3    -----.........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_60709

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD5-12*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCTGCTGTCGGATACTTT	GTGGCTACGATT	CGGGTGAGGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTGCTGTCGGATACTTTGTGGCTACGATTCGGGTGAGGGCATGGACGTC	ARLCCRILCGYDSGEGMDV	246	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  I  R  S  T  N  F  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_2263   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCATCAGGAGTACTAATTTCTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  95.2% (237/249)  IGHV4-39*01  50   .....TCC...A..................G.........C....G..G..A......................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  
                    Query_2263   94   TGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGCCACCATATCCGTAGACACGTCCA  183
V  95.2% (237/249)  IGHV4-39*01  140  ..................................................................T.......................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  D  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  C  C  R  I  L  C  
                    Query_2263   184  AGGACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACTCTGCTGTCGGATACTTTGTG  273
V  95.2% (237/249)  IGHV4-39*01  230  ..A.....................G............................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD5-12*01  10   ---------------------------------------------------------------------------------------...  12

                                      -IMGT----------------------->                                 
                                      G  Y  D  S  G  E  G  M  D  V  W  G  Q  G  T  T  V  P  V  S  S 
                    Query_2263   274  GCTACGATTCGGGTGAGGGCATGGACGTCTGGGGCCAAGGGACCACGGTCCCCGTCTCCTCA  335
D  100.0% (12/12)   IGHD5-12*01  13   .........-----------------------------------------------------  21
J  97.6% (41/42)    IGHJ6*02     21   --------------------..............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_138646

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           357     1e-100
IGHD2-2*01                                                                                            12.2    34    
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGAGCTGAGGGACCGGATCTTCTGCA	AGTTGTACC	TGCACACG	ACAAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGAGCTGAGGGACCGGATCTTCTGCAAGTTGTACCTGCACACGACAATTGGATCGACCCC	AKDGAEGPDLLQVVPAHDNWIDP	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2264   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-30*18  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  A  V  I  S  Y  D  G  N  N  K  F  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2264   91   ACTGGGTGGCAGTTATATCATATGATGGAAATAATAAATTCTATACAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.6% (239/250)  IGHV3-30*18  137  .G............................G........A....G.............................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  L  L  Y  L  Q  M  N  S  L  R  A  A  D  T  A  V  Y  Y  C  A  K  D  G  A  E  G  P  D  
                    Query_2264   181  AGAATTTGCTGTATCTGCAAATGAACAGCCTGAGAGCTGCGGACACGGCTGTCTATTATTGTGCGAAAGATGGAGCTGAGGGACCGGATC  270
V  95.6% (239/250)  IGHV3-30*18  227  ....CAC................................A............G.....C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      --CDR3-IMGT----------------------------->                                  
                                      L  L  Q  V  V  P  A  H  D  N  W  I  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2264   271  TTCTGCAAGTTGTACCTGCACACGACAATTGGATCGACCCCTGGGGCCAGGGAACACTGGTCACCGTCTCCTCAG  345
D  88.9% (8/9)      IGHD2-2*01   11   -------...A.....-----------------------------------------------------------  19
J  94.1% (48/51)    IGHJ5*02     1    ------------------------....C...T......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_138641

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           288     5e-80
IGHD2-15*01                                                                                           12.2    31   
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCGACCGT	CTACTC	N/A	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCGACCGTCTACTCCAACTGGTTCAACCCC	ARHPTVYSNWFNP	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	14	7	0	66.7
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	214	30	0	87.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  S  I  N  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_2265   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCATCAATAATTACTACTGGAGTTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAGT  93
V  87.7% (214/244)  IGHV4-59*08  50   .....TCC...A..................G........G..G............C....................G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  Y  I  Y  S  D  G  Y  T  T  Y  N  P  S  L  K  S  R  L  T  I  S  Q  D  T  S  K  S  
                    Query_2265   94   GGCTTGGCTATATCTACTCCGATGGATACACCACTTACAACCCCTCCCTCAAGAGTCGACTTACCATTTCACAAGACACGTCCAAGAGCC  183
V  87.7% (214/244)  IGHV4-59*08  140  ..A....G........T.A.AG...GAG.....AC........................G.C.....A...GT..............A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  T  V  Y  S  N  W  F  
                    Query_2265   184  AGTTCTCCCTGAAGCTGACGTCTGTGACCGCCGCAGACACGGCCGTCTACTACTGTGCGAGACATCCGACCGTCTACTCCAACTGGTTCA  273
V  87.7% (214/244)  IGHV4-59*08  230  ..................GC..........................G..T..............--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD2-15*01  25   -------------------------------------------------------------------------......-----------  30
J  93.9% (46/49)    IGHJ5*02     2    -------------------------------------------------------------------------------..........G  12

                                      ---->                                 
                                      N  P  W  G  P  G  T  L  V  A  V  S  S 
                    Query_2265   274  ACCCCTGGGGCCCGGGAACCCTGGTCGCCGTCTCCTCA  311
J  93.9% (46/49)    IGHJ5*02     13   ............A.............A...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_4029

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            313     2e-87
IGHD6-13*01                                                                                           14.1    8.7  
IGHJ5*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAGGAC	TAGCACCACCTGG	AGCGGGAACAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGACTAGCACCACCTGGAGCGGGAACATACAACTGGTTCGACCCC	ARLGLAPPGAGTYNWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	224	24	0	90.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  R  F  S  S  I  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2266   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGACTCAGGTTCAGTAGTATTTGGATGAGCTGGGTCCGCCAGGCTCCTGGGAAGGGGCTGG  90
V  90.3% (224/248)  IGHV3-7*01   47   .........................C......T...CC..T.....CTA...........................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  H  I  N  Q  D  A  S  D  H  Y  Y  L  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_2266   91   AGTGGGTGGCCCACATAAATCAAGATGCAAGTGACCACTACTATCTGGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  90.3% (224/248)  IGHV3-7*01   137  ...........A.......G.......G......GA.A......G..........................A..................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  S  S  V  F  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  A  R  L  G  L  A  P  P  G  
                    Query_2266   181  AGAGTTCAGTGTTTCTGCAAATGAACAGCCTGACAGCCGAAGACACGGCTGTTTATTACTGTGCGAGACTAGGACTAGCACCACCTGGAG  270
V  90.3% (224/248)  IGHV3-7*01   227  ...AC...C...A....................G......G...........G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.6% (11/13)    IGHD6-13*01  6    ---------------------------------------------------------------------------.....G..G....--  18

                                      IMGT--------------------->                                  
                                      A  G  T  Y  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2266   271  CGGGAACATACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
J  100.0% (51/51)   IGHJ5*02     1    ---------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_4028

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            302     3e-84
IGHD2-15*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCATTGTGGA	AGTGGTGG	CTGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCATTGTGGAAGTGGTGGCTGTTTCTACTTTGACATC	ARVHCGSGGCFYFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	56	27	21	6	0	77.8
FR2-IMGT	57	107	51	46	5	0	90.2
CDR2-IMGT	108	128	21	17	4	0	81
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	221	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  S  D  S  I  S  G  S  D  W  W  T  W  I  R  Q  P  P  G  K  G  
                    Query_2267   1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTAGTGACTCCATCAGCGGTTCTGACTGGTGGACTTGGATCCGCCAGCCCCCAGGGAAGGGGC  90
V  88.8% (221/249)  IGHV4-4*02   47   ..A.....TCC...A..............G...G..........A..AG.A.........G....G........................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  H  H  S  A  D  T  H  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  N  S  
                    Query_2267   91   TGGAGTGGATCGGAGAGATCCATCATAGTGCGGACACCCACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAACTCTA  180
V  88.8% (221/249)  IGHV4-4*02   137  ..........T..G..A...T.........G.AG....A..............................................G..C.  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  E  L  R  S  V  T  A  A  D  A  A  L  Y  Y  C  A  R  V  H  C  G  S  G  G  
                    Query_2267   181  AGAACCAATTCTCCCTGGAGCTGAGGTCTGTGACCGCCGCGGACGCGGCCCTGTATTACTGTGCGAGAGTTCATTGTGGAAGTGGTGGCT  270
V  88.8% (221/249)  IGHV4-4*02   227  .......G.........A.......C..................A.....G..................---------------------  295
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD2-15*01  11   --------------------------------------------------------------------------------........--  18

                                      ---------------->                                  
                                      C  F  Y  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2267   271  GTTTCTACTTTGACATCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  95.7% (45/47)    IGHJ4*02     2    ----..........TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_265695

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-58*01                                                                                           377     1e-106
IGHD3-3*01                                                                                            14.1    9.6   
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-58*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCCTAT	TTATGATACC	AGGGCGGGGGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAGATCCTATTTATGATACCAGGGCGGGGGGTGCTTTTGGTATC	AADPIYDTRAGGAFGI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	266	25	0	91.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  P  E  V  K  K  P  G  T  S  V  R  V  S  C  K  A  S  G  F  T  F  S  S  S
                    Query_2268   1    GCAGCTGGTGCAGTCTGGGCCTGAGGTGAAGAAGCCTGGGACCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGATTCACCTTTAGCAGCTC  90
V  91.4% (266/291)  IGHV1-58*01  6    ..................................................A................................CT.....  95
                                        Q  L  V  Q  S  G  P  E  V  K  K  P  G  T  S  V  K  V  S  C  K  A  S  G  F  T  F  T  S  S

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  A  Q  W  V  R  Q  A  R  G  Q  P  L  E  W  V  G  W  I  V  V  G  S  D  G  T  N  S  A  R
                    Query_2268   91   TGCTGCGCAGTGGGTGCGACAGGCTCGTGGACAACCCCTTGAGTGGGTTGGTTGGATCGTCGTTGGCAGTGATGGCACAAACTCCGCGCG  180
V  91.4% (266/291)  IGHV1-58*01  96   .....T.............................G..........A.A..A...................G.AA........A...A.A  185
                                        A  V  Q  W  V  R  Q  A  R  G  Q  R  L  E  W  I  G  W  I  V  V  G  S  G  N  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        T  L  E  D  R  V  T  I  T  R  D  V  S  T  S  T  A  Y  M  E  L  S  S  L  K  S  E  D  T  A
                    Query_2268   181  GACGTTGGAGGACAGAGTCACCATTACCAGGGACGTGAGCACAAGCACAGCCTACATGGAGCTGAGCAGCCTGAAGTCCGAGGACACGGC  270
V  91.4% (266/291)  IGHV1-58*01  186  ..A...CC....A.....................A..TC...................................GA..............  275
                                        K  F  Q  E  R  V  T  I  T  R  D  M  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  A  D  P  I  Y  D  T  R  A  G  G  A  F  G  I  W  G  Q  G  T  M  V  T  V  S
                    Query_2268   271  CGTCTATTATTGTGCGGCAGATCCTATTTATGATACCAGGGCGGGGGGTGCTTTTGGTATCTGGGGCCAAGGGACAATGGTCACCGTCTC  360
V  91.4% (266/291)  IGHV1-58*01  276  ...G.....C...........---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  A                                                                        
D  90.0% (9/10)     IGHD3-3*01   22   ---------------------------....T.....-----------------------------------------------------  31
J  97.9% (46/47)    IGHJ3*02     4    ------------------------------------------------........A.................................  45

                                           
                                        S  
                    Query_2268   361  TTCAG  365
J  97.9% (46/47)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_265697

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  R  I  R  Q  H  P  G  K  G 
                    Query_2269   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCCGGATCCGGCAGCACCCAGGGAAGGGC  90
V  96.8% (240/248)  IGHV4-31*03  49   ..................................C......C.....................T.......C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2269   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  96.8% (240/248)  IGHV4-31*03  139  .....G.........T.C................G.......................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_2269   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  96.8% (240/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  98.0% (50/51)    IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  *  G  Q  G  T  L  V  T  V  S  S  
                    Query_2269   271  GACCCCTAGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  98.0% (50/51)    IGHJ5*02     12   .......G................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_265696

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43D*01                                                                                          321     7e-90
IGHD2-21*01                                                                                           14.1    8.8  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43D*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCTAA	GTCTCTACGTCGCTTA	GGTGATT	CTCCTCGACGATCAC	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAAGTCTCTACGTCGCTTAGGTGATTCTCCTCGACGATCACACGGTATGGACGTC	AKSLRRLGDSPRRSHGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  G  Y  A  M  Y  W  V  R  Q  G  P  G  K  G  L  
                    Query_2270    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGGTTACGCCATGTACTGGGTCCGTCAAGGTCCGGGGAAGGGTCTGG  90
V  91.5% (226/247)  IGHV3-43D*01  47   .............................................A...T......C...............C.................  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  S  L  I  S  W  D  A  T  T  A  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  K  R  
                    Query_2270    91   AGTGGGTCTCTCTTATTAGTTGGGATGCCACTACCGCATACTACGCAGACTCTGTGAAGGGTCGATTCACCATCTCCAGAGACAAGAGAA  180
V  91.5% (226/247)  IGHV3-43D*01  137  ...........................GTGG..G.A.C.....T.........................................C..C.  226
                                       E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                       K  N  S  L  Y  L  Q  M  N  S  L  G  P  D  D  T  A  L  Y  Y  C  A  K  S  L  R  R  L  G  D  
                    Query_2270    181  AAAACTCCCTGTATTTGCAAATGAACAGTCTGGGACCTGACGACACCGCCTTATATTACTGCGCTAAGTCTCTACGTCGCTTAGGTGATT  270
V  91.5% (226/247)  IGHV3-43D*01  227  ..............C.................A..G....G...........G........T..A..-----------------------  293
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-21*01   14   -----------------------------------------------------------------------------------.......  20

                                       -IMGT----------------------->                                 
                                       S  P  R  R  S  H  G  M  D  V  W  G  R  G  T  T  V  I  V  S  S 
                    Query_2270    271  CTCCTCGACGATCACACGGTATGGACGTCTGGGGCCGAGGGACCACGGTCATTGTCTCCTCA  332
J  93.6% (44/47)    IGHJ6*02      16   ---------------.....................A..............CC.........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_265691

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            353     1e-99
IGHD6-19*01                                                                                           18.0    0.66 
IGHJ4*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-19*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGGG	AGCAGTGGC	CGCTTCATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGGAGCAGTGGCCGCTTCATCATTGACTAC	ARGGSSGRFIIDY	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	70	5	0	93.3
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	19	5	0	79.2
FR3-IMGT	178	291	114	94	20	0	82.5
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	261	35	0	88.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  T  F  S 
                    Query_2271   4    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTCAGGCTTCTGGATACACCTTCAGC  93
V  88.2% (261/296)  IGHV1-8*01   1    .....G.....G...........G.........................................CA.....................C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  E  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  I  N  P  K  G  G  H  T  G  Y 
                    Query_2271   94   AATTATGAAATCAATTGGGTGCGACAAGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATAAACCCTAAAGGTGGTCACACTGGCTAT  183
V  88.2% (261/296)  IGHV1-8*01   91   .G......T.....C...........G...................................G........CA.....A....A......  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  S  T  I  G  S  N  G  T  A  Y  M  E  L  N  R  L  R  S  E  D 
                    Query_2271   184  GCACAGAAATTCCAGGGCAGAGTCACCATGAGCACTATTGGTTCAAACGGCACAGCCTACATGGAACTCAACAGGTTGCGATCTGAGGAC  273
V  88.2% (261/296)  IGHV1-8*01   181  ........G......................C..GG.ACACC..C.TAA................G..G.G...CC..A...........  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  Y  C  A  R  G  G  S  S  G  R  F  I  I  D  Y  W  G  H  G  S  L  V  T  V  S  S 
                    Query_2271   274  ACGGCCGTCTATTACTGTGCGAGAGGCGGGAGCAGTGGCCGCTTCATCATTGACTACTGGGGCCACGGAAGCCTGGTCACCGTCTCCTCA  363
V  88.2% (261/296)  IGHV1-8*01   271  ........G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R  G                                                                
D  100.0% (9/9)     IGHD6-19*01  7    ------------------------------.........---------------------------------------------------  15
J  95.1% (39/41)    IGHJ4*01     7    -------------------------------------------------................A....C...................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_272947

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*06                                                                                           353     9e-100
IGHD3-3*01                                                                                            19.9    0.16  
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*06	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGGAACA	ATTTTTGGAG	CCACGGGGA	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGGAACAATTTTTGGAGCCACGGGGATATGGACGTC	AKDRNNFWSHGDMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  C  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2272   1    GGTCCCTGAGACTCTCCTGTGCCGCGTCTGGATTCACCTTCAGTCACTGTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-33*06  47   ......................A.....................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2272   91   AGTGGGTGGCAGTTATATGGTACGATGGAAGTAATAAATACTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCC  180
V  95.2% (238/250)  IGHV3-33*06  137  ......................T......................C...........................................A  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      Q  N  T  V  Y  L  L  M  N  S  L  R  V  E  D  T  A  V  Y  H  C  A  K  D  R  N  N  F  W  S  
                    Query_2272   181  AGAACACCGTGTATCTGCTAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATCACTGTGCGAAAGATCGGAACAATTTTTGGAGCC  270
V  95.2% (238/250)  IGHV3-33*06  227  .......GC.........A.................C...................T.............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-3*01   9    ------------------------------------------------------------------------------..........--  18

                                      ---------------->                                 
                                      H  G  D  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2272   271  ACGGGGATATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  320
J  97.7% (42/43)    IGHJ6*02     20   -------.......................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_265693

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           310     1e-86
IGHD5-12*01                                                                                           12.2    30   
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCC	GTGGAT	TAAGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCGTGGATTAAGCTTC	ATRGLSF	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  D  M  N  W  L  R  Q  A  P  G  K  G  P  
                    Query_2273   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACTTTCAGTAATTACGACATGAACTGGCTCCGCCAGGCTCCTGGGAAGGGGCCGG  90
V  90.2% (222/246)  IGHV3-48*03  47   .....................C...............C.......G...T..A.........G.............A..........T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  D  I  T  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_2273   91   AGTGGGTCTCATCCATTAGTAGTCGTGGAGATATCACATACTACGCGGACTCAGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.2% (222/246)  IGHV3-48*03  137  .......T....A..........A....TAG..C..T.........A.....T...A.................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  S  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  T  R  G  L  S  F  W  G  
                    Query_2273   181  AGAACTCACTGTCCCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTCTTTATTACTGTGCGACCCGTGGATTAAGCTTCTGGGGCC  270
V  90.2% (222/246)  IGHV3-48*03  227  ............AT......................C...G.........G...............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD5-12*01  1    ---------------------------------------------------------------------......---------------  6
J  94.3% (33/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  A  Q  V  T  V  S  S  
                    Query_2273   271  AGGGAGCCCAGGTCACCGTCTCCTCAG  297
J  94.3% (33/35)    IGHJ4*02     22   .....A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_265692

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           349     2e-98
IGHD3-9*01                                                                                            14.1    8.5  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGTGCTCCCGTATTGCAGTCTGACT	ACTTGTTATT	N/A	TGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGTGCTCCCGTATTGCAGTCTGACTACTTGTTATTTGGAAGTC	ASVLPYCSLTTCYLEV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2274   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCATCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.1% (235/247)  IGHV3-33*01  47   ....................................C.....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  T  K  R  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2274   91   AGTGGGTGGCAGTTATATGGTATGATGGAACTAAAAGATATTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.1% (235/247)  IGHV3-33*01  137  ..............................G...T.A...C....C............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  T  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  V  L  P  Y  C  S  L  
                    Query_2274   181  GGAACACGCTGTATCTAGAAATGAATAGCCTGAGAGCCGAGGACACGGCTGTCTACTACTGTGCGAGCGTGCTCCCGTATTGCAGTCTGA  270
V  95.1% (235/247)  IGHV3-33*01  227  A...............GC.......C..........................G..T...........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      T------------------>                                 
                                      T  T  C  Y  L  E  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2274   271  CTACTTGTTATTTGGAAGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
D  90.0% (9/10)     IGHD3-9*01   17   --...G......-----------------------------------------  26
J  97.6% (40/41)    IGHJ6*02     22   ------------....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_58227

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  R  H  P  G  K  G 
                    Query_2275   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCGGCACCCAGGGAAGGGC  90
V  97.2% (241/248)  IGHV4-31*03  49   ..................................C......C.............................C.A................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2275   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.2% (241/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_2275   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.2% (241/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2275   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_123993

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           447     8e-128
IGHD5-18*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTATCCTC	TACAGCTATGG	GGAAGATGGA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTATCCTCTACAGCTATGGGGAAGATGGATACGGTATGGACGTC	ARGILYSYGEDGYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	288	2	0	99.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_2276   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  99.3% (288/290)  IGHV1-69*01  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q
                    Query_2276   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCCATCTTTGGTACAGCAAACTACGCACA  180
V  99.3% (288/290)  IGHV1-69*01  96   ...............................................................T..........................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_2276   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  99.3% (288/290)  IGHV1-69*01  186  ..........................................................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  G  I  L  Y  S  Y  G  E  D  G  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_2276   271  CGTGTATTACTGTGCGAGAGGTATCCTCTACAGCTATGGGGAAGATGGATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  99.3% (288/290)  IGHV1-69*01  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (11/11)   IGHD5-18*01  6    ----------------------------...........---------------------------------------------------  16
J  100.0% (48/48)   IGHJ6*02     15   -------------------------------------------------.........................................  55

                                             
                                        S  S 
                    Query_2276   361  CTCCTCA  367
J  100.0% (48/48)   IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_344445

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     3e-91
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTCC	AKDNTYSSGYSPLDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  L  R  Q  A  P  G  K  G  P  
                    Query_2277   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGCTCCGCCAGGCTCCGGGGAAGGGGCCGG  90
V  91.6% (229/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...G.............A..........T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  S  G  S  S  T  H  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_2277   91   AGTGGGTCTCAGCGATTACTGGGAGTGGTAGTAGTACACACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  91.6% (229/250)  IGHV3-23*01  137  .............T....G...T......G....C...T.....G......................................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  M  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_2277   181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGTCGAGGACACGGCCATGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  91.6% (229/250)  IGHV3-23*01  227  ...............................G....C.............G.A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2277   271  ATTCACCCCTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  97.6% (41/42)    IGHJ4*02     7    ---------......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_265699

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            325     3e-91
IGHD6-13*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACCTGGTACTCGGGGTTTTGACTAC	ARHLGTPGTRGFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	22	2	3	81.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	246	229	14	3	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_2278   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  87
V  93.1% (229/246)  IGHV4-4*02   49   ...............................G.....T........GTA.......................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  S  Y  H  S  G  R  T  N  Y  N  A  S  F  Q  S  R  V  T  I  S  V  D  T  S  K 
                    Query_2278   88   GAGTGGATTGGGGAATCCTATCATAGTGGGCGCACCAACTACAACGCGTCCTTCCAGAGTCGAGTCACCATATCAGTAGACACGTCCAAG  177
V  93.1% (229/246)  IGHV4-4*02   139  ...............AT.............A..............C.....C..A...........................A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  P  G  T  R 
                    Query_2278   178  AATCAATTCTCCCTGAATCTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACCTGGTACTCGG  267
V  93.1% (229/246)  IGHV4-4*02   229  ..C..G...........G....G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2278   268  GGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (43/43)   IGHJ4*02     6    ---...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_265698

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	AGTGGC	TACTATGACACTAGTGGT	GACATTCC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGTGGCTACTATGACACTAGTGGTGACATTCCCAACTGGTTCGACCCC	SGYYDTSGDIPNWFDP	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  R  R  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_2279   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCCGTCGTAATTACTATTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  94.7% (230/243)  IGHV4-61*01  49   ..........................................A..G...G......C.....C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_2279   91   CTGGAGTGGATTGGATATATCTATTACCGTGGGACCACCAACTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCC  180
V  94.7% (230/243)  IGHV4-61*01  139  ..............G............A......G............C..............................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  T  Y  Y  C  S  G  Y  Y  D  T  S  G  D 
                    Query_2279   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCACTTATTACTGTAGTGGCTACTATGACACTAGTGGTGAC  270
V  94.7% (230/243)  IGHV4-61*01  229  ...................................................GTG.........---------------------------  291
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  88.9% (16/18)    IGHD3-22*01  5    ---------------------------------------------------------------------........T.G.......---  22

                                      GT------------------>                                  
                                       I  P  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2279   271  ATTCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (50/50)   IGHJ5*02     2    -----..................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_323650

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         338     5e-95
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	N/A	TTCGCCACACTTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTTCGCCACACTTCTTACTACTTCTACGCTTTGGACGTC	ARVRHTSYYFYALDV	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  H  P  P  G  K  G 
                    Query_2280     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCATCCCCCCGGGAAGGGC  90
V  93.2% (233/250)  IGHV4-30-4*01  49   ..................A..............................A........................G.....A.........  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  Y  I  G  Y  V  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  V  S  I  L  V  D  T  S 
                    Query_2280     91   CTGGAGTACATTGGGTACGTCTATTACAGTGGGACTACCTACTATAATAAGTCTCTCAAGAGTCGAGTTAGCATATTAGTAGACACGTCC  180
V  93.2% (233/250)  IGHV4-30-4*01  139  .......GG.........A...............GC........C..CCC...C................C.....C.............  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  H  T  S  Y  Y 
                    Query_2280     181  AAGAACCAGTTCTCCCTGAAGCTGAGATCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGTTCGCCACACTTCTTACTAC  270
V  93.2% (233/250)  IGHV4-30-4*01  229  ..........................C...........................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  93.0% (53/57)    IGHJ6*02       6    ------------------------------------------------------------------------------------......  11

                                        ----------------->                                 
                                         F  Y  A  L  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_2280     271  TTCTACGCTTTGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  321
J  93.0% (53/57)    IGHJ6*02       12   .A.....G.A..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_207379

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           299     2e-83
IGHD3-10*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTTTCGTTTATGAG	GGTTCGGGGA	ACCCTCCCGAAG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTTTCGTTTATGAGGGTTCGGGGAACCCTCCCGAAGGACTCC	ARLSFMRVRGTLPKDS	247	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	60	33	25	5	3	75.8
FR2-IMGT	61	111	51	46	5	0	90.2
CDR2-IMGT	112	132	21	17	4	0	81
FR3-IMGT	133	246	114	104	10	0	91.2
CDR3-IMGT (germline)	247	251	5	5	0	0	100
Total	N/A	N/A	251	223	25	3	88.8


Alignments

                                      <--------FR1-IMGT---------><-----------CDR1-IMGT-----------><--------------------FR2-IMGT-
                                       T  L  S  L  T  C  S  V  S  G  V  S  V  S  N  S  I  G  S  Y  W  S  W  I  R  Q  P  P  G  Q 
                    Query_2281   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGTCTCCGTCAGCAACAGTATTGGTTCCTATTGGAGCTGGATCCGGCAGCCCCCAGGTCAG  90
V  88.8% (223/251)  IGHV4-61*08  49   ...................C...........G...........---..GG.....A...C..........................GA..  135
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S     S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K 

                                      --------------------><-----CDR2-IMGT-----><-----------------------------------------------
                                       G  L  E  Y  I  G  Y  I  Y  H  T  G  G  A  N  Y  N  P  S  L  Q  N  R  V  T  I  S  V  D  T 
                    Query_2281   91   GGACTGGAATACATTGGGTATATCTATCACACTGGGGGCGCCAATTACAACCCCTCCCTCCAGAATCGAGTCACCATATCTGTAGACACG  180
V  88.8% (223/251)  IGHV4-61*08  136  ........G.GG...............T...G....A..A....C...............A...G...............A.........  225
                                       G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T 

                                      -----FR3-IMGT----------------------------------------------------><-------------------CDR3
                                       S  K  N  Q  F  S  L  S  L  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  L  S  F  M  R  V 
                    Query_2281   181  TCCAAGAACCAGTTCTCCCTGAGCCTAACCTCTGTGAGCGCTGCGGACACGGCCGTGTATTATTGTGCGAGGCTTTCGTTTATGAGGGTT  270
V  88.8% (223/251)  IGHV4-61*08  226  ......................AG..G.G........C........................C........-------------------  296
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                      
D  100.0% (10/10)   IGHD3-10*01  11   --------------------------------------------------------------------------------------....  14

                                      -IMGT------------------>                                  
                                       R  G  T  L  P  K  D  S  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_2281   271  CGGGGAACCCTCCCGAAGGACTCCTGGGGCCAGGGATCCCTGGTCATCGTCTCCTCAG  328
D  100.0% (10/10)   IGHD3-10*01  15   ......----------------------------------------------------  20
J  92.5% (37/40)    IGHJ4*02     9    ------------------....A.............A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_207372

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-10*01                                                                                           10.3    119  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACA	GGGGA	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACAGGGGATACTACGGTATGGACGTC	ARDDRGYYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_2282   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTATTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   .....................................................C.A.....G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  H  Y  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S 
                    Query_2282   91   CTGGAGTGGATTGGGAACATCCATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ...............T.....T...................C.................G........T.....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  E  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  D  D  R  G  Y  Y  G 
                    Query_2282   181  AAGAACCAGTTCTCCCTGGAGCTGACCTCTATGACAGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGATGACAGGGGATACTACGGT  270
V  94.4% (237/251)  IGHV4-31*03  229  ..................A......G....G....T.................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------------.....---------  20
J  96.0% (48/50)    IGHJ6*02     12   ---------------------------------------------------------------------------------.........  20

                                      -------->                                
                                       M  D  V  W  G  Q  G  I  T  V  T  V  S  S
                    Query_2282   271  ATGGACGTCTGGGGCCAAGGGATTACGGTCACCGTCTCCTC  311
J  96.0% (48/50)    IGHJ6*02     21   ......................CC.................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_207373

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           406     1e-115
IGHD3-3*01                                                                                            44.9    5e-09 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGGCCCG	CGATTTTTGGAGTGGTTATTATA	ATGGGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGGCCCGCGATTTTTGGAGTGGTTATTATAATGGGGGCTTTGAGTAC	ARPARDFWSGYYNGGFEY	292	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	70	1	0	98.6
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  
                    Query_2283   8    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGTT  97
V  94.8% (275/290)  IGHV1-46*01  5    ...................G....................................................................C.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  F  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  N  P  N  G  G  S  T  R  Y  A  
                    Query_2283   98   ACTTTATACACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGTGATCAACCCTAATGGTGGTAGTACAAGGTACGCAC  187
V  94.8% (275/290)  IGHV1-46*01  95   ...A...G.............................................A.A..........G.........C.....C.......  184
                                      Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  G  D  T  
                    Query_2283   188  AGAAGTTCCAGGGCAGAGTCACCATGACCACGGACACGTCCACGAGCACAGTCTACATGGAATTGAGCAGCCTGAGATCTGGGGACACGG  277
V  94.8% (275/290)  IGHV1-46*01  185  ..............................G..............................GC..................A........  274
                                      Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><----------------------CDR3-IMGT--------------------->                      
                                      A  V  Y  Y  Y  A  R  P  A  R  D  F  W  S  G  Y  Y  N  G  G  F  E  Y  W  G  Q  G  T  V  V  
                    Query_2283   278  CCGTGTACTACTATGCGAGACCGGCCCGCGATTTTTGGAGTGGTTATTATAATGGGGGCTTTGAGTACTGGGGCCAGGGAACTGTGGTCA  367
V  94.8% (275/290)  IGHV1-46*01  275  .......T....G.......----------------------------------------------------------------------  294
                                      A  V  Y  Y  C  A  R                                                                       
D  100.0% (23/23)   IGHD3-3*01   7    ----------------------------.......................---------------------------------------  29
J  93.2% (41/44)    IGHJ4*02     5    ----------------------------------------------------------......C.................CC......  36

                                                  
                                      T  V  S  S  
                    Query_2283   368  CCGTCTCCTCAG  379
J  93.2% (41/44)    IGHJ4*02     37   ............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_207370

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_2284   1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  87.0% (214/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_2284   91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCACCATCTCAGTAGACAAGTCCAAG  180
V  87.0% (214/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A................A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_2284   181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  87.0% (214/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_2284   271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_207371

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD2-21*01                                                                                           10.3    122   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TGTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTGTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFVQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_2285   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   .............................................................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2285   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  ..................................G.............C......................C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  V  Q  E 
                    Query_2285   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTTCTCTATTTGTCCAAGAA  270
V  97.6% (242/248)  IGHV4-31*03  229  ..........................C.........................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD2-21*01  22   ---------------------------------------------------------------------------.....----------  26

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_2285   271  AGAGTCTACTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.9% (47/48)    IGHJ4*02     1    -------.....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_207376

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_2286   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG..G.T..................................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_2286   91   TGGATTGGATATATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  93.4% (228/244)  IGHV4-59*01  139  ........G...................G.....A............................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W 
                    Query_2286   181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------------------------------------------....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_2286   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (35/35)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_207377

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           39.1    3e-07
IGHJ2*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTGCCCATGA	ATTACTATGATAGTAGTGGCTCTTAC	ATTGGGAGCGTTA	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTGCCCATGAATTACTATGATAGTAGTGGCTCTTACATTGGGAGCGTTAGGTACTTCGATTTC	ARDVPMNYYDSSGSYIGSVRYFDF	238	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_2287   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTTTTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   ........................................G.....AC........C............C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  A  K  N 
                    Query_2287   91   TGGATTGGCTATGTCTATTCCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGCCGAGTCACCTTATCAGTGGACACGGCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G...A......A....................................T.........A.......A......T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------------C
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  V  P  M  N  Y  Y  D  S 
                    Query_2287   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATGTGCCCATGAATTACTATGATAGT  270
V  94.3% (231/245)  IGHV4-59*01  229  .............A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.3% (24/26)    IGHD3-22*01  3    ----------------------------------------------------------------------------..............  16

                                      DR3-IMGT------------------------------>                                  
                                       S  G  S  Y  I  G  S  V  R  Y  F  D  F  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2287   271  AGTGGCTCTTACATTGGGAGCGTTAGGTACTTCGATTTCTGGGGCCGTGGCACCCTGGTCACTGTCTCTTCAG  343
D  92.3% (24/26)    IGHD3-22*01  17   .....T.A....-------------------------------------------------------------  28
J  95.8% (46/48)    IGHJ2*01     6    -------------------------...........C...............................C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_207374

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           347     7e-98
IGHD4-4*01                                                                                            21.8    0.041
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD4-4*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGAAAAA	TGACTACAGTA	GTGTTGAACTCGGTG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGAAAAATGACTACAGTAGTGTTGAACTCGGTGGGTTCGACCCC	ARMKNDYSSVELGGFDP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  T  G  F  T  F  S  Y  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2288   1    GGTCCCTGAGACTCTCCTGTGCTGCCACTGGATTCACCTTCAGTTATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-48*03  47   ......................A...T.................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  T  G  T  N  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2288   91   AGTGGATTTCATATATTAGTAGTACTGGCACTAACATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (235/248)  IGHV3-48*03  137  .....G.......C..........G...T.G..C........................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  D  D  T  A  L  Y  Y  C  A  R  M  K  N  D  Y  S  S  
                    Query_2288   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTCTTTATTACTGTGCGAGAATGAAAAATGACTACAGTAGTG  270
V  94.8% (235/248)  IGHV3-48*03  227  ............A...........................G.........G.................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD4-4*01   1    ----------------------------------------------------------------------------...........---  11

                                      GT-------------------->                                  
                                      V  E  L  G  G  F  D  P  W  G  R  G  T  Q  V  T  V  S  S  
                    Query_2288   271  TTGAACTCGGTGGGTTCGACCCCTGGGGCCGGGGAACCCAGGTCACCGTCTCCTCAG  327
J  95.6% (43/45)    IGHJ5*02     7    ------------..................A........T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_207375

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            294     6e-82
IGHD2-21*02                                                                                           29.5    2e-04
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCTGT	TGCCTCGCT	TATTGTGCTGGTGACTGC	ATCCGCGATAAAACGGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TGCCTCGCTTATTGTGCTGGTGACTGCATCCGCGATAAAACGGCCTACTTTGACTAC	CLAYCAGDCIRDKTAYFDY	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	44	7	0	86.3
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	102	12	0	89.5
Total	N/A	N/A	240	214	26	0	89.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  V  S  V  I  S  S  N  W  W  T  W  V  R  Q  T  P  T  K  G  L 
                    Query_2289   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGTCTCCGTCATCAGCAGTAACTGGTGGACTTGGGTCCGCCAGACCCCAACTAAGGGGCTG  90
V  89.2% (214/240)  IGHV4-4*01   49   ...............................G....A...G...T.............G.............C.....GGG.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_2289   91   GAGTGGATTGGAGACATCTATTATAGGGGGAACACCAACTACAACCCGTCCCTCGAGAGCCGAGTCACCATCTCAGTGGACAAGTCCAAG  180
V  89.2% (214/240)  IGHV4-4*01   139  ...........G..A......C....T....G......................A....T...........A.....A............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       N  H  F  S  L  N  L  N  S  V  T  A  A  D  T  A  I  Y  F  C  C  L  A  Y  C  A  G  D  C  I 
                    Query_2289   181  AACCACTTCTCCCTGAACCTGAACTCTGTCACCGCCGCGGACACGGCAATATATTTCTGTTGCCTCGCTTATTGTGCTGGTGACTGCATC  270
V  89.2% (214/240)  IGHV4-4*01   229  .....G...........G....G......G.................CG.G....G....------------------------------  288
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C                               
D  94.4% (17/18)    IGHD2-21*02  5    ---------------------------------------------------------------------.......G..........---  22

                                      MGT----------------------->                                  
                                       R  D  K  T  A  Y  F  D  Y  W  G  P  G  A  P  V  T  V  P  S  
                    Query_2289   271  CGCGATAAAACGGCCTACTTTGACTACTGGGGCCCGGGAGCCCCGGTCACCGTCCCCTCAG  331
J  91.5% (43/47)    IGHJ4*02     2    --------------....................A....A...T..........T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_299631

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD1-26*01                                                                                           14.1    9.3   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGG	TAGTGGG	CAATACAGTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCT	ARGGSGQYSAYFGS	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  I  S  D
                    Query_2290   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCATCTGGATACAGCTTTATCAGTGA  90
V  93.1% (269/289)  IGHV5-51*01  6    .............................A....................A..............GT................C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  G  K  G  L  D  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  S  P
                    Query_2290   91   CTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGACTGGATGGGGGTCATTTATCCTGGTGACTCTGAAACCAGATATAGTCC  180
V  93.1% (269/289)  IGHV5-51*01  96   .......................T..................G.........A....C.................T........C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  T  S  L  K  A  S  D  T  A
                    Query_2290   181  GTCCTTCCAAGGCCAGGTCACCATTTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGACCAGCCTGAAGGCCTCGGACACCGC  270
V  93.1% (269/289)  IGHV5-51*01  186  ........................C...................G....................G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  F  C  A  R  G  G  S  G  Q  Y  S  A  Y  F  G  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2290   271  CATATACTTCTGTGCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.1% (269/289)  IGHV5-51*01  276  ...G..T.A..........----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD1-26*01  5    ------------------------.......----------------------------------------------------------  11
J  93.6% (44/47)    IGHJ4*02     2    ------------------------------------------........A..AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_254007

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           400     9e-114
IGHD1-1*01                                                                                            14.1    9.4   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAGGGGG	CAACTGG	GACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTAC	ARGGGNWDPFDY	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	73	1	0	98.6
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	46	5	0	90.2
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	294	5	5	0	0	100
Total	N/A	N/A	292	274	18	0	93.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_2291   3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCG  92
V  93.8% (274/292)  IGHV5-51*01  2    .....................................................................G............C......A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      A  Y  W  I  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  V  V  Y  P  D  D  S  D  A  R  Y  
                    Query_2291   93   CCTACTGGATCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGGTCGTCTATCCTGATGACTCTGATGCCAGATACA  182
V  93.8% (274/292)  IGHV5-51*01  92   G.....................C..G.........A..........G.........A..A.........G..........A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  H  I  T  I  S  A  D  K  S  I  S  T  A  F  L  Q  W  N  S  L  K  A  S  D  
                    Query_2291   183  GCCCGTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACA  272
V  93.8% (274/292)  IGHV5-51*01  182  ...........C.......GG....................................A...........G....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  I  Y  Y  C  A  R  G  G  G  N  W  D  P  F  D  Y  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_2291   273  CCGCCATCTATTACTGTGCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTACCGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.8% (274/292)  IGHV5-51*01  272  .......G..............-----------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    -------------------------------.......-------------------------------------------------  11
J  97.7% (43/44)    IGHJ4*02     5    -------------------------------------------..........T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_299633

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           402     3e-114
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATGATC	GTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATCGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDRGSYLYYFYGMDV	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	104	10	0	91.2
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	295	276	19	0	93.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_2292   5    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCA  94
V  93.6% (276/295)  IGHV5-51*01  2    ..G..................................................................G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  I  M  Y  P  D  D  S  D  I  R  Y  
                    Query_2292   95   GTTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATCGGCATCATGTATCCTGATGACTCTGATATCAGATACA  184
V  93.6% (276/295)  IGHV5-51*01  92   .C..........G.......................................G..G.....C.......G...........C........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  G  T  A  Y  L  Q  W  R  G  L  K  A  P  D  
                    Query_2292   185  GCCCGTCTTTCGAGGGCCAGGTCACCATCTCAGCCGACAAGTCCATCGGCACCGCCTACCTGCAGTGGAGGGGCCTGAAGGCCCCGGACC  274
V  93.6% (276/295)  IGHV5-51*01  182  .......C...C.A.................................A......................CA...........T.....A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      P  A  I  Y  F  C  A  R  H  G  D  D  R  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  P  G  T  
                    Query_2292   275  CCGCCATATATTTCTGTGCGAGACATGGGGATGATCGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCCGGGGACCA  364
V  93.6% (276/295)  IGHV5-51*01  272  .......G....A............-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  90.9% (10/11)    IGHD1-26*01  7    ------------------------------------.......C...-------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------------.......A.......................AA.......  45

                                                       
                                      T  V  T  V  S  S 
                    Query_2292   365  CGGTCACCGTCTCCTCA  381
J  94.7% (54/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_299634

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           397     8e-113
IGHD3-22*01                                                                                           18.0    0.65  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCGTCG	TGATAGTTATGGTTA	CC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGCGTCGTGATAGTTATGGTTACCACTTTGACCGC	ARGRRDSYGYHFDR	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  G  T  F  R  S  Y
                    Query_2293   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAGGGTCTCCTGCAAGGCCTCTGGAGGCACCTTCAGAAGCTA  90
V  93.8% (272/290)  IGHV1-69*01  6    ..................G.......................C.......A...............T.................C.....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  T  G  G  I  I  P  L  F  G  T  P  N  Y  A  Q
                    Query_2293   91   TGTCATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGACGGGAGGGATCATCCCTCTGTTTGGCACACCAAACTACGCACA  180
V  93.8% (272/290)  IGHV1-69*01  96   ..CT....G......................................T................A.C.....T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  M  S  T  T  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_2293   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCTATGAGCACAACTTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  93.8% (272/290)  IGHV1-69*01  186  .......................................C.C.......G.C......................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  G  R  R  D  S  Y  G  Y  H  F  D  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2293   271  CGTGTATTACTGTGCGCGAGGGCGTCGTGATAGTTATGGTTACCACTTTGACCGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.8% (272/290)  IGHV1-69*01  276  ................A...---------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                       
D  86.7% (13/15)    IGHD3-22*01  10   ---------------------------.......AG......-----------------------------------------------  24
J  95.6% (43/45)    IGHJ4*02     4    --------------------------------------------........TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_299636

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           322     2e-90
IGHD3-10*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGAGTAAATCC	ATGGTTCGGGGTGTTA	CCCCCGCGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGAGTAAATCCATGGTTCGGGGTGTTACCCCCGCGGGCTAC	AGSKSMVRGVTPAGY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	242	3	3	0	0	100
Total	N/A	N/A	242	224	18	0	92.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  S  V  T  S  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2294   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGGTTCAGCGTCACTAGCAACTACATGAATTGGGTCCGGCAGGCTCCAGGGAAGGGGCTGG  90
V  92.6% (224/242)  IGHV3-53*01  47   ....................G...............C.....G..............GC........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  H  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  S  I  F  R  D  S  T  K  
                    Query_2294   91   AGTGGGTCTCAGTTATTCATAGCGGGGGTACCACATACTACGCAGACTCCGTGAAGGGCCGATTCAGCATCTTTAGAGACAGTACTAAGA  180
V  92.6% (224/242)  IGHV3-53*01  137  .................T.......T....G...................................C.....CC.......A.T.C....  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------CDR3-IMGT----
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  G  S  K  S  M  V  R  G  V  
                    Query_2294   181  ACACCCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTACTACTGTGCGGGGAGTAAATCCATGGTTCGGGGTGTTA  270
V  92.6% (224/242)  IGHV3-53*01  227  ....G............................................G..T.........----------------------------  288
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  93.8% (15/16)    IGHD3-10*01  9    --------------------------------------------------------------------------...........A....  24

                                      ------------->                                  
                                      T  P  A  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2294   271  CCCCCGCGGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (38/38)   IGHJ4*02     11   ----------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_299637

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           374     8e-106
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	ARPSSASGWHFDN	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	264	25	0	91.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_2295   1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCAGTTA  90
V  91.3% (264/289)  IGHV5-51*03  6    .........................G.............G.........................G.........C.GC..T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  E  I  R  Y  S  P
                    Query_2295   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGAGATTAGATATAGTCC  180
V  91.3% (264/289)  IGHV5-51*03  96   C.......G..................................................AT...GG.........T.CC.....C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  G
                    Query_2295   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGG  270
V  91.3% (264/289)  IGHV5-51*03  186  .............................C..A.AA........G............................................C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2295   271  CATGTATTACTGTGCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  91.3% (264/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_299638

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           291     5e-81
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	213	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_2296   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  88.8% (213/240)  IGHV4-59*01  49   ..................A......................T.GT.A...C....G.............C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R 
                    Query_2296   91   TGGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGA  180
V  88.8% (213/240)  IGHV4-59*01  139  .......GG.....C.ATT................C..C...........C.....................G.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G 
                    Query_2296   181  CACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGT  270
V  88.8% (213/240)  IGHV4-59*01  229  ..G...........G....G............T..............G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-22*01  7    -----------------------------------------------------------------------------..........A..  19

                                      ----------------------->                                  
                                       G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2296   271  GGCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  328
D  93.3% (14/15)    IGHD3-22*01  20   ..--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    --------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_299639

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCTCAG	AGTAGTACCAACTGTTATG	GGCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCAGAGTAGTACCAACTGTTATGGGCTTCTACTACTACGGTATGGACGTC	ARGLRVVPTVMGFYYYGMDV	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	240	117	109	5	3	93.2
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	228	17	3	91.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  G  G  S  F  S  T  Y  C  W  T  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_2297   1    ACCCTGTCCCTCACCTGCACTGTCTATGGTGGGTCCTTCAGCACTTACTGCTGGACCTGGATCCGCCAGACCCCAGGGAAGGGGCTGGAG  90
V  91.9% (228/248)  IGHV4-34*01  49   ..................G......................TGG.....A.....G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><-----------------------------------------------------FR3
                                       W  I  G  E  I  Y  V  G  G  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_2297   91   TGGATTGGGGAAATCTATGTTGGTGGAGGCACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAG  180
V  91.9% (228/248)  IGHV4-34*01  139  ...............A..CA.A.....A.....---...................................A..................  225
                                       W  I  G  E  I  N  H  S  G  S  T     N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                      -IMGT------------------------------------------------------><-------------------------CDR3
                                       N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  G  L  R  V  V  P  T  V 
                    Query_2297   181  AACCAGTTCTCCCTGAACCTGAGCTCTGTGACCGCCGCGGACACGGCTATGTACTACTGCGCGAGAGGCCTCAGAGTAGTACCAACTGTT  270
V  91.9% (228/248)  IGHV4-34*01  226  .................G..............................G....T.....T........----------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                      
D  89.5% (17/19)    IGHD2-2*01   11   --------------------------------------------------------------------------..........G...C.  26

                                      -IMGT------------------------>                                 
                                       M  G  F  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2297   271  ATGGGCTTCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
D  89.5% (17/19)    IGHD2-2*01   27   ...------------------------------------------------------------  29
J  100.0% (55/55)   IGHJ6*02     8    --------.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_335610

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            392     2e-111
IGHD7-27*01                                                                                           10.3    124   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	AGAGGGC	CTGGG	TTGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGAAGAGGGCCTGGGTTGGTTGACTAC	AHRRGPGLVDY	263	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	27	3	0	90
FR2-IMGT	77	127	51	49	2	0	96.1
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	111	3	0	97.4
CDR3-IMGT (germline)	263	271	9	9	0	0	100
Total	N/A	N/A	271	261	10	0	96.3


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  T  T  G  G  V  A  V  A  W  I  R
                    Query_2298   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCACCACTGGTGGAGTGGCTGTGGCCTGGATCCG  90
V  96.3% (261/271)  IGHV2-5*01   30   ...........................................................G....A.........G.....G.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  D  W  L  A  L  I  D  G  N  D  D  K  R  F  S  P  S  L  K  S  R  L  T
                    Query_2298   91   TCAGCCCCCAGGAAAGGCCCTGGACTGGCTTGCACTCATTGATGGGAATGATGATAAGCGCTTCAGCCCATCTCTGAAGAGCAGGCTCAC  180
V  96.3% (261/271)  IGHV2-5*01   120  ........................G...............T..T..................A...........................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  T  K  D  T  S  K  N  Q  V  I  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  H  C  A  H  R
                    Query_2298   181  CATCACCAAGGACACCTCCAAAAACCAGGTGATCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATCACTGTGCACACAG  270
V  96.3% (261/271)  IGHV2-5*01   210  ...............................G............................................T.............  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  R

                                      ----CDR3-IMGT----------->                                  
                                        R  G  P  G  L  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2298   271  AAGAGGGCCTGGGTTGGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  329
V  96.3% (261/271)  IGHV2-5*01   300  .----------------------------------------------------------  300
                                                                                                 
D  100.0% (5/5)     IGHD7-27*01  5    --------.....----------------------------------------------  9
J  100.0% (42/42)   IGHJ4*02     7    -----------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_10436

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           375     3e-106
IGHD2-15*01                                                                                           14.1    8.7   
IGHJ6*02                                                                                              110     2e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	AGGATAT	CAATAGGGGAATTTGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGATATCAATAGGGGAATTTGGTACTACTACTACGGTATGGACGTC	ARDQDINRGIWYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  S  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2299   1    GGTCCCTGAGACTCTCCTGTGCATCCTCTGGGTTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (245/250)  IGHV3-48*03  47   .......................G.......A..........................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_2299   91   AGTGGGTTTCATATATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.0% (245/250)  IGHV3-48*03  137  .............C...........................................A................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Q  D  I  N  R  G  
                    Query_2299   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATCAGGATATCAATAGGGGAA  270
V  98.0% (245/250)  IGHV3-48*03  227  ............A.........................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-15*01  1    ------------------------------------------------------------------------.......-----------  7

                                      -IMGT----------------------->                                 
                                      I  W  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2299   271  TTTGGTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  100.0% (57/57)   IGHJ6*02     6    -----.........................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_10437

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           367     6e-104
IGHD1-26*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GA	GGTGTAGTGGGAGC	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTAT	ARGGVVGAPFDY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	17	7	0	70.8
FR3-IMGT	175	288	114	101	13	0	88.6
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	265	30	0	89.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  Q  P  G  S  S  V  K  V  S  C  K  S  S  G  G  S  F  S 
                    Query_2300   1    CAGGTTCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGCAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGAGTTCTGGAGGTAGTTTCAGC  90
V  89.8% (265/295)  IGHV1-69*01  1    .....G..............................A................................GC.........C.CC......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  A  V  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  T  M  P  L  F  G  I  P  T  Y 
                    Query_2300   91   AGCTATGCTGTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGTACCATGCCTCTGTTTGGCATACCAACGTAC  180
V  89.8% (265/295)  IGHV1-69*01  91   .........A...............................................G.G.T...C...A.C.....T.C.G...AC...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  G  K  L  Q  G  R  V  T  I  T  A  D  A  S  T  R  T  A  Y  M  E  L  S  S  L  R  S  G  D 
                    Query_2300   181  GCAGGGAAGTTGCAGGGCAGAGTCACAATAACCGCGGACGCATCCACGAGGACAGCCTACATGGAGTTGAGCAGCCTGAGATCTGGGGAC  270
V  89.8% (265/295)  IGHV1-69*01  181  ...CA......C..............G..T..........A.........C...............C..................A....  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  I  Y  Y  C  A  R  G  G  V  V  G  A  P  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_2300   271  ACGGCCATTTATTACTGTGCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTATTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  358
V  89.8% (265/295)  IGHV1-69*01  271  ......G.G................---------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                 
D  92.9% (13/14)    IGHD1-26*01  1    ---------------------------...A..........-----------------------------------------------  14
J  95.5% (42/44)    IGHJ4*02     5    --------------------------------------------.........C............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_10434

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           288     5e-80
IGHD3-10*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	GACCAAGG	GGTTCGGGGACTTA	CTGCAGCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGACCAAGGGGTTCGGGGACTTACTGCAGCCCTTTGACCAC	VRTKGFGDLLQPFDH	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	19	7	0	73.1
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	126	24	18	6	0	75
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	245	5	4	1	0	80
Total	N/A	N/A	244	214	30	0	87.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  E  T  S  G  F  T  L  S  S  S  T  M  N  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_2301   2    CCCTGTCCCTCACCTGCGAAACCTCTGGATTCACCTTGAGTAGTTCCACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  87.7% (214/244)  IGHV3-21*01  50   .....AGA...T....T.C.G................C.....C.AT.G.........................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  A  S  I  T  S  G  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  
                    Query_2301   92   GGGTCGCATCTATTACTAGTGGAAGCACTTACATCTACTACGCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAACGCCAAGA  181
V  87.7% (214/244)  IGHV3-21*01  140  .....T....C....G....A.T..T.G......A........................C..............................  229
                                      W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><-----------------CDR3-IMGT----
                                      N  S  L  F  L  Q  L  S  G  L  R  V  E  D  T  A  V  Y  S  C  V  R  T  K  G  F  G  D  L  L  
                    Query_2301   182  ACTCACTGTTTCTGCAACTGAGTGGCCTGAGAGTCGAGGACACGGCTGTCTATTCCTGTGTGAGGACCAAGGGGTTCGGGGACTTACTGC  271
V  87.7% (214/244)  IGHV3-21*01  230  .........A.......A...ACA.........C...............G....A.....C...--------------------------  293
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  92.9% (13/14)    IGHD3-10*01  11   ------------------------------------------------------------------------..........G...----  24

                                      ------------->                                  
                                      Q  P  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2301   272  AGCCCTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  97.7% (43/44)    IGHJ4*02     5    ----.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_10432

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           282     4e-78
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	217	27	6	86.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_2302   4    CCCTGAGACTCTCCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.8% (217/250)  IGHV4-34*01  50   .....TCC...A..........C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_2302   94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.8% (217/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_2302   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.8% (217/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_2302   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_10433

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           396     2e-112
IGHD7-27*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGTCCTTTTA	CTAACTGGGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGTCCTTTTACTAACTGGGGTTGACTTT	AVLLLTGVDF	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	269	16	0	94.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  N  Y
                    Query_2303   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACAGCTTTACCAACTA  90
V  94.4% (269/285)  IGHV5-51*03  6    .............................................................A........................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  G  W  V  R  Q  R  P  G  E  G  L  E  W  M  G  L  I  Y  P  G  D  S  D  T  R  Y  N  S
                    Query_2303   91   CTTCATCGGCTGGGTGCGCCAGAGGCCCGGGGAGGGCCTGGAGTGGATGGGGCTCATTTATCCTGGTGACTCTGATACCAGGTACAACTC  180
V  94.4% (269/285)  IGHV5-51*03  96   ..GG...................T.......A.A..................A....C.......................A....G.C.  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2303   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.4% (269/285)  IGHV5-51*03  186  ...............G............................G..........C..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        I  Y  Y  C  A  V  L  L  L  T  G  V  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2303   271  CATTTATTACTGTGCAGTCCTTTTACTAACTGGGGTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  347
V  94.4% (269/285)  IGHV5-51*03  276  ...G...........--------------------------------------------------------------  290
                                        M  Y  Y  C  A                                                              
D  100.0% (10/10)   IGHD7-27*01  1    -------------------------..........------------------------------------------  10
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_10430

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           286     1e-79
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCAGC	ATACATCTCTGGT	CACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAGCATACATCTCTGGTCACCCCTAC	SAYISGHPY	240	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	102	12	0	89.5
Total	N/A	N/A	239	211	28	0	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  V  S  V  H  Y  M  S  W  V  R  Q  A  P  G  R  G  L  
                    Query_2304   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCGTCAGTGTACACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAGGGGACTGG  90
V  88.3% (211/239)  IGHV3-53*01  47   ...............................G...A........AGCA.................................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  L  T  S  G  K  T  Y  Y  T  D  S  A  M  G  R  F  T  I  S  R  D  S  S  K  
                    Query_2304   91   AGTGGGTCTCAGCGATTCTTACCAGTGGTAAGACATACTACACAGACTCCGCGATGGGCCGATTCACCATCTCCAGAGACTCTTCCAAGA  180
V  88.3% (211/239)  IGHV3-53*01  137  ............TT...TA..G.G......GC.........G.........T..A.........................AA........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->    
                                      N  T  V  N  L  Q  M  N  S  L  S  A  G  D  T  A  F  Y  Y  C  S  A  Y  I  S  G  H  P  Y  W  
                    Query_2304   181  ACACAGTGAATCTTCAAATGAACAGCCTGAGCGCCGGGGACACGGCCTTCTATTACTGTTCAGCATACATCTCTGGTCACCCCTACTGGG  270
V  88.3% (211/239)  IGHV3-53*01  227  ....GC..T......................A....A..........G.G.........-------------------------------  285
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                                
D  84.6% (11/13)    IGHD5-18*01  5    ----------------------------------------------------------------.....G..A....-------------  17
J  100.0% (38/38)   IGHJ4*02     11   ----------------------------------------------------------------------------------........  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_2304   271  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  300
J  100.0% (38/38)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_10431

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           308     4e-86
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGACAG	ATTGTCGTAGTCCCCGGTGCTA	C	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGACAGATTGTCGTAGTCCCCGGTGCTACCTACGGTATGGACGTC	ARDRQIVVVPGATYGMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	221	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  S  S  S  Y  F  W  T  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_2305   1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCTCCAGCAGTAGTTACTTCTGGACTTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  90.2% (221/245)  IGHV4-59*01  49   ....................T................T...........A.....GC.................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  D  G  S  G  S  P  R  Y  N  P  S  L  K  S  R  V  T  M  S  L  D  T  S  K  N 
                    Query_2305   91   TGGATTGGCTATGTCGATGGCAGTGGGAGTCCCAGGTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCGCTAGACACGTCCAAGAAC  180
V  90.2% (221/245)  IGHV4-59*01  139  ........G...A..T..TA.........CA...AC................................A..AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       R  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  Q  I  V  V  V  P  G 
                    Query_2305   181  CGATTCTCCCTGAGGCTGAATTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGACAGATTGTCGTAGTCCCCGGT  270
V  90.2% (221/245)  IGHV4-59*01  229  .AG..........A.....GC............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  81.8% (18/22)    IGHD2-2*01   6    ------------------------------------------------------------------------.....A.....A..A.C.  23

                                      -------------------->                                 
                                       A  T  Y  G  M  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_2305   271  GCTACCTACGGTATGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  324
D  81.8% (18/22)    IGHD2-2*01   24   ....--------------------------------------------------  27
J  98.0% (48/49)    IGHJ6*02     14   -----...............................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_268520

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           352     3e-99
IGHD1-20*01                                                                                           10.3    121  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TAGC	GGTAT	TGGCCGGTCGTTGGTCCGC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTAGCGGTATTGGCCGGTCGTTGGTCCGCTATGGACGTC	ARVAVLAGRWSAMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  W  I  H  W  V  R  Q  G  P  G  K  G  L  
                    Query_2306   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTCAGTAGTTACTGGATACACTGGGTCCGCCAAGGTCCAGGAAAGGGGCTGA  90
V  95.2% (237/249)  IGHV3-74*01  47   ......................................T.......C........G................C......G.........G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      M  W  V  S  R  I  N  S  D  G  S  G  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2306   91   TGTGGGTCTCACGTATTAATAGTGATGGGAGTGGCACAAGTTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (237/249)  IGHV3-74*01  137  ................................A.......C.................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  D  Q  D  T  A  V  Y  Y  C  A  R  V  A  V  L  A  G  R  
                    Query_2306   181  AGAACACGGTGTATCTGCAAATGAACAGTCTGAGAGACCAGGACACGGCTGTCTATTACTGTGCAAGAGTAGCGGTATTGGCCGGTCGTT  270
V  95.2% (237/249)  IGHV3-74*01  227  ........C...........................C.G.............G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-20*01  1    -------------------------------------------------------------------------.....------------  5

                                      ---------------->                              
                                      W  S  A  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_2306   271  GGTCCGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  317
J  100.0% (40/40)   IGHJ6*02     20   -------........................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_268521

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           419     2e-119
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	CCGCCTTCCCTAGCGACACCGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGCCTTCCCTAGCGACACCGGGTACTTTGACTAC	ARAAFPSDTGYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  D  T  F  T  R  Y
                    Query_2307   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGAGACACCTTCACCAGGTA  90
V  96.2% (279/290)  IGHV1-46*01  6    ..................G......................................................T.............C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  S  G  A  T  K  Y  A  Q
                    Query_2307   91   CTTTATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTAGTGGAGCCACAAAATACGCACA  180
V  96.2% (279/290)  IGHV1-46*01  96   ..A................................................................G....TAG.....GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  I  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_2307   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAATCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  96.2% (279/290)  IGHV1-46*01  186  .................................................G........................................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  A  A  F  P  S  D  T  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2307   271  CGTGTATTACTGTGCGAGAGCCGCCTTCCCTAGCGACACCGGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  96.2% (279/290)  IGHV1-46*01  276  ....................---------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                       
J  100.0% (46/46)   IGHJ4*02     3    -------------------------------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_268522

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           319     2e-89
IGHD3-3*01                                                                                            14.1    8.1  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TGC	GGAGTGG	ACTTATG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGCGGAGTGGACTTATGGACTCC	ARLRSGLMDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	14	7	0	66.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  I  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  N  G 
                    Query_2308   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAACATTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCGGGGAACGGA  90
V  90.8% (227/250)  IGHV4-39*01  49   ...............................G........G..G..G.................................A.....G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  V  S  N  S  G  N  T  Y  Y  N  P  S  L  K  R  R  V  T  V  S  V  D  T  S 
                    Query_2308   91   CTGGAGTGGCTTGGGAGTGTCTCGAACAGTGGTAACACCTACTACAACCCGTCCCTCAAGCGTCGGGTCACCGTATCCGTAGACACGTCC  180
V  90.8% (227/250)  IGHV4-39*01  139  .........A........A...ATT.T.....G.G.........................A....A......A.................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       N  H  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  R  S  G  L  M  D 
                    Query_2308   181  AATCATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTTCTGTGCGAGACTGCGGAGTGGACTTATGGAC  270
V  90.8% (227/250)  IGHV4-39*01  229  ..GA.C.............A......................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   15   -------------------------------------------------------------------------.......----------  21
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2308   271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_268523

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           374     7e-106
IGHD3-3*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	242	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2309   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (242/245)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_2309   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.8% (242/245)  IGHV4-34*01  139  .........................................................................T................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_2309   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  98.8% (242/245)  IGHV4-34*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2309   271  GCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_268524

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           333     1e-93
IGHD3-16*01                                                                                           12.2    32   
IGHJ2*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGCCG	TGGGGG	CATCAAGGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGCCGTGGGGGCATCAAGGGATCCTGGTACTCCGATCTC	ARVRRGGIKGSWYSDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2310   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGACATGAGATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-48*03  47   ..............................................TT....A.....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  T  G  S  T  L  I  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2310   91   AGTGGGTTTCACACATTAGTACTGGTAGTACTCTTATACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  92.8% (231/249)  IGHV3-48*03  137  ...........T.........G.A..G...G.ACC...T..................................................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  V  R  R  G  G  I  K  
                    Query_2310   181  AGAATTCTCTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGAGAGTCCGCCGTGGGGGCATCAAGG  270
V  92.8% (231/249)  IGHV3-48*03  227  ....C..A........G.................................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------------......--------  22

                                      T------------------>                                  
                                      G  S  W  Y  S  D  L  W  G  R  G  T  L  V  T  V  S  P  
                    Query_2310   271  GATCCTGGTACTCCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCCCAG  324
J  96.0% (48/50)    IGHJ2*01     4    ----........T.....................................T...  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_268525

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD5-12*01                                                                                           14.1    8.6  
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	CTTAGACTCCCGTGT	TGGCTAC	CATCGC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGACTTAGACTCCCGTGTTGGCTACCATCGCGCTGATTACTTCCACCAC	AKDLDSRVGYHRADYFHH	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  M  F  D  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2311   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCATGTTTGACAACTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-23*01  47   .....................C..............CC...AG..G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  V  S  G  G  G  F  S  S  Y  Y  A  D  S  V  R  G  R  F  T  A  S  R  D  S  S  
                    Query_2311   91   AGTGGGTCTCAGGTGTTAGTGGGGGTGGTTTTAGTTCATACTACGCAGACTCCGTGAGGGGCCGGTTCACCGCCTCAAGAGACAGTTCCA  180
V  90.4% (226/250)  IGHV3-23*01  137  ............C.A.......TA.....GG...CA.....................A.............AT...C.......A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  L  D  S  R  V  G  
                    Query_2311   181  AGAACACACTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAGGACTTAGACTCCCGTGTTGGCT  270
V  90.4% (226/250)  IGHV3-23*01  227  .......G........G...................................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD5-12*01  11   -------------------------------------------------------------------------------------.....  15

                                      IMGT--------------------->                                  
                                      Y  H  R  A  D  Y  F  H  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2311   271  ACCATCGCGCTGATTACTTCCACCACTGGGGCCAGGGCACCCTGGTCACTGTCTCCTCAG  330
D  100.0% (7/7)     IGHD5-12*01  16   ..----------------------------------------------------------  17
J  94.2% (49/52)    IGHJ1*01     1    --------.....A........G..........................C..........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_268526

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           363     2e-102
IGHD6-19*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGG	TGTC	CAGTGGCTGCTAC	CCCGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGTGTCCAGTGGCTGCTACCCCGCACTACTTTGACTCC	ARCPVAATPHYFDS	263	304	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	29	1	0	96.7
FR2-IMGT	77	127	51	49	2	0	96.1
CDR2-IMGT	128	148	21	18	3	0	85.7
FR3-IMGT	149	262	114	103	11	0	90.4
CDR3-IMGT (germline)	263	268	6	5	1	0	83.3
Total	N/A	N/A	268	250	18	0	93.3


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  C  V  T  W  I  R
                    Query_2312   1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGTGTGTGACTTGGATCCG  90
V  93.3% (250/268)  IGHV2-70*01  30   ......................................................................A.........GC........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  N  Y  E  K  W  Y  N  T  S  L  T  T  R  L  S
                    Query_2312   91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACTCATTGATTGGAATTATGAGAAATGGTATAACACATCTCTGACGACCAGGCTCTC  180
V  93.3% (250/268)  IGHV2-70*01  120  ..............................................G..G....T....AC..C.G...........A..........A.  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  R  D  S  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  C
                    Query_2312   181  CATCTCCAGGGACTCCTCCAAAAACCAGGTGGTCCTAACAATGACCAATATGGACCCTGTGGACACAGCCACATATTACTGTGCGCGGTG  270
V  93.3% (250/268)  IGHV2-70*01  210  ........A....A......................T...........C.......................G...........A...--  297
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                      ---------CDR3-IMGT--------------->                                  
                                        P  V  A  A  T  P  H  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2312   271  TCCAGTGGCTGCTACCCCGCACTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  338
D  92.3% (12/13)    IGHD6-19*01  9    --.........G...-----------------------------------------------------  21
J  97.9% (47/48)    IGHJ4*02     1    --------------------............A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_10439

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CTCA	GGATACATCTCTGGTTAC	CC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAGGATACATCTCTGGTTACCCCTAC	SGYISGYPY	240	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	238	113	106	7	0	93.8
Total	N/A	N/A	238	220	18	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  P  V  S  R  H  Y  M  S  W  V  R  Q  A  P  G  R  G  L  
                    Query_2313   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTACCCGTCAGTAGACACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAGGGGACTGG  90
V  92.4% (220/238)  IGHV3-53*01  47   ...............................G..CA..........CA.................................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  Y  T  S  G  S  T  Y  Y  T  D  S  V  M  G  R  F  T  I  S  R  D  S  S  K  
                    Query_2313   91   AGTGGGTCTCAGCGATTTATACCAGTGGTAGCACATACTACACAGACTCCGTCATGGGCCGATTCACCATCTCCAGAGACTCTTCCAAGG  180
V  92.4% (220/238)  IGHV3-53*01  137  ............TT.......G.G.................G..........G.A.........................AA.......A  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->    
                                      D  T  M  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  S  G  Y  I  S  G  Y  P  Y  W  
                    Query_2313   181  ACACGATGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGCTCAGGATACATCTCTGGTTACCCCTACTGGG  270
V  92.4% (220/238)  IGHV3-53*01  227  .....C....................................................--------------------------------  284
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                   
D  88.9% (16/18)    IGHD5-18*01  3    --------------------------------------------------------------.......G..A.......----------  20
J  100.0% (38/38)   IGHJ4*02     11   ----------------------------------------------------------------------------------........  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_2313   271  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  300
J  100.0% (38/38)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_125719

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           413     2e-117
IGHD5-18*01                                                                                           14.1    9.5   
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGAG	TACATCTATG	CCTCGGGCGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGAGTACATCTATGCCTCGGGCGGACTGGGTCGACCAC	ARDRSTSMPRADWVDH	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  I  S  Y 
                    Query_2314   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTTATCAGTTAT  91
V  95.5% (277/290)  IGHV1-18*01  7    ............................A....................................T................C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  T  Y  N  A  N  T  N  S  A  Q 
                    Query_2314   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCTACAATGCCAACACAAACTCTGCACAG  181
V  95.5% (277/290)  IGHV1-18*01  97   ..........................................................G.G.T.......GT..........A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  I  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_2314   182  AACCTCCAGGGCAGAATCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAACTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.5% (277/290)  IGHV1-18*01  187  ..G............G...........................................G..............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  D  R  S  T  S  M  P  R  A  D  W  V  D  H  W  G  Q  G  T  L  V  T  V  S 
                    Query_2314   272  GTGTATTACTGTGCGAGAGATCGGAGTACATCTATGCCTCGGGCGGACTGGGTCGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  361
V  95.5% (277/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD5-18*01  6    --------------------------....G.....------------------------------------------------------  15
J  95.8% (46/48)    IGHJ5*02     4    ----------------------------------------------.....T......C...............................  47

                                          
                                       S  
                    Query_2314   362  TCAG  365
J  95.8% (46/48)    IGHJ5*02     48   ....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_202828

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            280     1e-77
IGHD4-17*01                                                                                           14.1    8.7  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TGGGCCTCAGGGCACTC	ACTACGG	GATGTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGGGCCTCAGGGCACTCACTACGGGATGTCCTACTTCTACGGATTGGACGTC	ASGPQGTHYGMSYFYGLDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	18	9	0	66.7
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	18	3	0	85.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	213	34	0	86.2


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  V  V  S  G  G  S  I  S  S  D  R  W  W  N  W  V  R  Q  P  P  G  K  G  
                    Query_2315   1    GGTCCCTGAGACTCTCCTGCGTTGTGTCTGGTGGCTCCATCAGTTCCGACAGGTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  86.2% (213/247)  IGHV4-4*02   47   ..A.....TCC...A......C...C.................CAGTAGT.AC.......G.............................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  V  G  E  V  Y  H  T  G  S  A  N  S  K  P  S  L  E  S  R  V  T  L  S  V  D  K  S  
                    Query_2315   91   TGGAGTGGGTTGGGGAAGTCTATCATACTGGGAGCGCCAACTCCAAGCCGTCCCTCGAGAGTCGAGTCACCTTGTCAGTAGACAAGTCCA  180
V  86.2% (213/247)  IGHV4-4*02   137  ........A........A.........G.......A......A...C.........A..............A.A................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      R  N  T  F  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  G  P  Q  G  T  H  Y  
                    Query_2315   181  GGAACACCTTTTCCCTGAGCCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGTGGGCCTCAGGGCACTCACTACG  270
V  86.2% (213/247)  IGHV4-4*02   227  A....CAG..C.......AG.....C.........................................-----------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD4-17*01  3    ------------------------------------------------------------------------------------......  8

                                      -IMGT----------------------->                                 
                                      G  M  S  Y  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2315   271  GGATGTCCTACTTCTACGGATTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  332
D  100.0% (7/7)     IGHD4-17*01  9    .-------------------------------------------------------------  9
J  92.7% (51/55)    IGHJ6*02     8    -------.....A......TA.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_329077

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           377     9e-107
IGHD3-22*01                                                                                           21.8    0.044 
IGHJ6*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGAG	GTAGCGGTTATTAC	GC	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGAGGTAGCGGTTATTACGCCGTC	ARGGGSGYYAV	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	265	24	0	91.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_2316   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACTAACTAT  91
V  91.7% (265/289)  IGHV1-18*01  7    ...................................................................................C.G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  V  P  G  Q  G  L  E  W  M  G  W  I  G  T  H  N  G  K  T  T  Y  A  Q 
                    Query_2316   92   GGCATCACCTGGGTGCGACAGGTCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCGGCACTCACAATGGTAAGACGACATATGCACAG  181
V  91.7% (265/289)  IGHV1-18*01  97   ..T....G..............C...........................A......A..G..T..........C..A.AC.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  K  D  R  V  T  M  T  T  D  T  S  T  S  T  V  H  L  E  L  R  S  L  R  S  D  D  T  A 
                    Query_2316   182  AAGTTCAAGGACAGAGTCACCATGACCACAGACACATCAACCAGCACAGTCCACCTGGAGCTGAGGAGCCTGAGATCCGACGACACGGCC  271
V  91.7% (265/289)  IGHV1-18*01  187  ...C..C...G...........................C..G.......C.T..A......................T............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                 
                                       F  Y  Y  C  A  R  G  G  G  S  G  Y  Y  A  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2316   272  TTTTATTACTGTGCGAGAGGAGGAGGTAGCGGTTATTACGCCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  349
V  91.7% (265/289)  IGHV1-18*01  277  G.G................-----------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                             
D  92.9% (13/14)    IGHD3-22*01  15   -------------------------....T.........---------------------------------------  28
J  100.0% (37/37)   IGHJ6*02     26   -----------------------------------------.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_202825

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            313     1e-87
IGHD2-21*01                                                                                           12.2    31   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	TGGTGA	AGTATTCCTTGGATC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGGTGAAGTATTCCTTGGATCACTTTGACCAC	ARLVKYSLDHFDH	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	102	12	0	89.5
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	223	23	0	90.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  N  D  H  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_2317   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATTACCAATGATCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.7% (223/246)  IGHV4-4*02   49   ..................GC...........G......C.G..G.AG.A.........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  R  S  G  S  T  T  Y  N  P  S  L  Q  S  R  V  A  F  S  V  D  K  S  K 
                    Query_2317   91   GAGTGGATTGGAGAAATCTATCGTAGTGGGAGCACCACTTACAACCCGTCCCTCCAGAGTCGAGTCGCCTTCTCAGTAGACAAGTCCAAG  180
V  90.7% (223/246)  IGHV4-4*02   139  ...........G..........A..............AC...............A...........A..A.A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  F  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  V  K  Y  S  L  D  H 
                    Query_2317   181  AACCAGTTCTCCCTGAGTCTGAGATCTGTGACCGCCGCCGATACGGCCGTATATTACTGTGCGAGATTGGTGAAGTATTCCTTGGATCAC  270
V  90.7% (223/246)  IGHV4-4*02   229  ................AG.....C..............G..C........G...............------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-21*01  13   -------------------------------------------------------------------......-----------------  18
J  95.6% (43/45)    IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                                  
                                       F  D  H  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_2317   271  TTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  313
J  95.6% (43/45)    IGHJ4*02     6    ......T................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_202824

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            378     3e-107
IGHD1-26*01                                                                                           12.2    35    
IGHJ5*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y
                    Query_2318   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACCACTTA  90
V  91.7% (266/290)  IGHV1-8*01   6    ..................G...............................................T........C..........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F  A  Q
                    Query_2318   91   TGATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTTGCACA  180
V  91.7% (266/290)  IGHV1-8*01   96   .................................A..G..............A..............C.G...T..........A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D  T  A
                    Query_2318   181  GAGATTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGACACGGC  270
V  91.7% (266/290)  IGHV1-8*01   186  ..AG...C............................C.....A.................GC............G..C..AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  V  P  V  S  S 
                    Query_2318   271  CATATATTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCA  352
V  91.7% (266/290)  IGHV1-8*01   276  .G.G................--------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   -----------------------------...G.....--------------------------------------------  18
J  97.5% (39/40)    IGHJ5*02     11   ------------------------------------------............................A...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_125717

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           316     2e-88
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTATT	TCGCTCACGCA	TATACCAGTGGCTGGTAC	CAAGGGGCTGCGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CACGCATATACCAGTGGCTGGTACCAAGGGGCTGCGGGCTAC	HAYTSGWYQGAAGY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	238	109	101	8	0	92.7
Total	N/A	N/A	238	220	18	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  N  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_2319   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGGTAATTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  92.4% (220/238)  IGHV4-39*01  49   ....................................A....C...A...G.......................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  L  Y  T  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  F  I  D  T  S 
                    Query_2319   91   CTGGAATGGATTGGGAGTCTCTACACTAGTGGGAGCACCTACTACAATCCGTCCCTCAAGAGTAGAGTCACCATATTCATTGACACGTCC  180
V  92.4% (220/238)  IGHV4-39*01  139  .....G............A....TTA.....................C...............C............C.G.A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  A  H  A  Y  T  S  G  W  Y  Q 
                    Query_2319   181  AAGAACCAGTTCTCCTTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCTGTTTATTTCGCTCACGCATATACCAGTGGCTGGTACCAA  270
V  92.4% (220/238)  IGHV4-39*01  229  ...............C.........G...........................G....--------------------------------  286
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y                                  
D  94.4% (17/18)    IGHD6-19*01  4    ---------------------------------------------------------------------....G.............---  21

                                      -------------->                                  
                                       G  A  A  G  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_2319   271  GGGGCTGCGGGCTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  319
J  97.4% (37/38)    IGHJ4*02     11   -----------................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_202826

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            18.0    0.58 
IGHJ5*01                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGC	TACGATTTT	GGGTCATTGTGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGCTACGATTTTGGGTCATTGTGGTGGTTCGACTCC	ARGRYDFGSLWWFDS	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	24	15	6	3	62.5
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	249	232	14	3	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2320   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCATATTCAGTAACTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-21*01  47   ............................T.......CC.......G......C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  M  S  G  S  S  S     S  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2320   91   AGTGGGTCTCATCCATGAGTGGAAGCAGTAGT---AGTTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  177
V  93.2% (232/249)  IGHV3-21*01  137  ................T...A.T..T......TAC.TA....................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  V  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  R  Y  D  F  G  S  
                    Query_2320   178  AGAACTCACTGGTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGGTCGCTACGATTTTGGGTCAT  267
V  93.2% (232/249)  IGHV3-21*01  227  ...........TA.......................................G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD3-3*01   5    --------------------------------------------------------------------------.........-------  13

                                      ---------------->                                  
                                      L  W  W  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_2320   268  TGTGGTGGTTCGACTCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  95.7% (44/46)    IGHJ5*01     6    -----....................A....C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_125711

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           413     2e-117
IGHD5-18*01                                                                                           14.1    9.5   
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGAG	TACATCTATG	CCTCGGGCGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGAGTACATCTATGCCTCGGGCGGACTGGGTCGACCAC	ARDRSTSMPRADWVDH	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  I  S  Y 
                    Query_2321   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTTATCAGTTAT  91
V  95.5% (277/290)  IGHV1-18*01  7    ............................A....................................T................C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  T  Y  N  A  N  T  N  S  A  Q 
                    Query_2321   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCTACAATGCCAACACAAACTCTGCACAG  181
V  95.5% (277/290)  IGHV1-18*01  97   ..........................................................G.G.T.......GT..........A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  I  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_2321   182  AACCTCCAGGGCAGAATCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAACTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.5% (277/290)  IGHV1-18*01  187  ..G............G...........................................G..............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  D  R  S  T  S  M  P  R  A  D  W  V  D  H  W  G  Q  G  T  L  V  T  V  S 
                    Query_2321   272  GTGTATTACTGTGCGAGAGATCGGAGTACATCTATGCCTCGGGCGGACTGGGTCGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  361
V  95.5% (277/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD5-18*01  6    --------------------------....G.....------------------------------------------------------  15
J  95.8% (46/48)    IGHJ5*02     4    ----------------------------------------------.....T......C...............................  47

                                          
                                       S  
                    Query_2321   362  TCAG  365
J  95.8% (46/48)    IGHJ5*02     48   ....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_125710

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           357     1e-100
IGHD6-13*01                                                                                           21.8    0.039 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGAG	AGCAGCAGCTG	AA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGAGCAGCAGCTGAATGACTAC	ARDREQQLNDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2322   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-21*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  V  S  S  I  S  T  S  N  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_2322   91   AGTGCGTCTCGTCCATTAGTACTAGCAATACTTACATTTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACGACGCCA  180
V  95.6% (239/250)  IGHV3-21*01  137  ....G.....A..........G...T.G..G......A.............................................A......  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  E  Q  Q  L  N  
                    Query_2322   181  AGAACTCACTATATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGAGAGCAGCAGCTGAATG  270
V  95.6% (239/250)  IGHV3-21*01  227  ..........G...C.......................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  7    ---------------------------------------------------------------------------...........----  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2322   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (41/41)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_202822

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     9e-121
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	109	5	0	95.6
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	295	283	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  
                    Query_2323   5    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCA  94
V  95.9% (283/295)  IGHV5-51*01  2    .................................A...................................G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  
                    Query_2323   95   ACTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACA  184
V  95.9% (283/295)  IGHV5-51*01  92   G...........G...........................C....................C...................C........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  
                    Query_2323   185  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACA  274
V  95.9% (283/295)  IGHV5-51*01  182  ...........C.....................................C...........G......A.....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  
                    Query_2323   275  CCGCCATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  364
V  95.9% (283/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  92.9% (13/14)    IGHD1-26*01  4    ---------------------------------..........C...-------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    --------------------------------------------------.......A................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_2323   365  CGGTCACCGTCTCCTCA  381
J  98.2% (56/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_309088

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           357     1e-100
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGGGGGGAGA	ATTACTATGATA	CGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGGGGGGAGAATTACTATGATACGCTTGACTAC	AKDRGENYYDTLDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2324   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-30*18  47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  K  D  G  S  N  K  F  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_2324   91   AGTGGCTGGCAGTTATATCAAAAGATGGAAGTAACAAATTCTATGCAGACTCCGTGAAGGGCCGACTCACCATCTCCAGAGACAATTCCA  180
V  95.6% (239/250)  IGHV3-30*18  137  .....G..............T.T...........T....A.........................T........................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  D  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  D  R  G  E  N  Y  Y  
                    Query_2324   181  AGAACACCCTGGATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTATATATTACTGTGCGAAAGATCGGGGGGAGAATTACTATG  270
V  95.6% (239/250)  IGHV3-30*18  227  .......G...T......................................G.G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD3-22*01  3    ---------------------------------------------------------------------------------.........  11

                                      ------------->                                  
                                      D  T  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2324   271  ATACGCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (12/12)   IGHD3-22*01  12   ...---------------------------------------------  14
J  100.0% (42/42)   IGHJ4*02     7    ------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_177749

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           428     3e-122
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ5*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAGGTGGG	CTATGGTTCGGGGAGTTATTAT	GC	CCCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGGTGGGCTATGGTTCGGGGAGTTATTATGCCCCC	ARQVGYGSGSYYAP	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	294	284	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  Q  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_2325   1    CAGGTTCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGCAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  90
V  96.6% (284/294)  IGHV1-69*06  1    .....G..............................A.....................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  T  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  N  Y 
                    Query_2325   91   AGCTATACTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATTTTTGGTACAACAAACTAC  180
V  96.6% (284/294)  IGHV1-69*06  91   ......G......G.........................................................C.........G........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  P  K  F  Q  D  R  V  T  I  T  A  D  K  S  T  R  T  A  Y  M  E  L  S  S  L  R  S  D  D 
                    Query_2325   181  GCACCGAAGTTCCAGGACAGAGTCACGATTACCGCGGACAAATCCACGAGGACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGACGAC  270
V  96.6% (284/294)  IGHV1-69*06  181  ....A...........G.................................C...................................G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  Q  V  G  Y  G  S  G  S  Y  Y  A  P  W  G  Q  G  S  L  V  T  V  S 
                    Query_2325   271  ACGGCCGTGTATTACTGTGCGAGACAGGTGGGCTATGGTTCGGGGAGTTATTATGCCCCCTGGGGCCAGGGATCCCTGGTCACCGTCTCC  360
V  96.6% (284/294)  IGHV1-69*06  271  ........................------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (22/22)   IGHD3-10*01  7    --------------------------------......................------------------------------------  28
J  97.4% (37/38)    IGHJ5*02     14   --------------------------------------------------------................A.................  47

                                          
                                       S  
                    Query_2325   361  TCAG  364
J  97.4% (37/38)    IGHJ5*02     48   ....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_22990

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           344     6e-97
IGHD3-9*01                                                                                            27.6    8e-04
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGGGAAG	TACGATCCTTTGACTGGTTA	ACCCC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGACCGGGAAGTACGATCCTTTGACTGGTTAACCCCCTACGACGGTATGGACGTC	VKDREVRSFDWLTPYDGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  K  F  T  F  S  K  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2326   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTAAATTCACCTTCAGCAAATATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  94.0% (235/250)  IGHV3-64*05  47   .............................GG............T.GC...........................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  H  V  S  G  I  S  R  Y  G  G  S  T  H  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2326   91   AACATGTTTCAGGAATTAGTCGTTATGGGGGTAGCACACACTACTCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-64*05  137  ..T.........CT......A..A..............T.....G.............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  E  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K  D  R  E  V  R  S  F  
                    Query_2326   181  AGAACACGCTGTATCTTGAAATGAGCAGTCTGCGAGCTGAGGACACGGCTGTGTATTACTGTGTGAAAGACCGGGAAGTACGATCCTTTG  270
V  94.0% (235/250)  IGHV3-64*05  227  ..............G..C..............A.....................................--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  90.0% (18/20)    IGHD3-9*01   5    ------------------------------------------------------------------------------......AT....  16

                                      R3-IMGT------------------------>                                 
                                      D  W  L  T  P  Y  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2326   271  ACTGGTTAACCCCCTACGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  90.0% (18/20)    IGHD3-9*01   17   ........---------------------------------------------------------  24
J  98.1% (51/52)    IGHJ6*02     11   -------------....T...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_177740

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     2e-91
IGHD4-4*01                                                                                            18.0    0.56 
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AATAAGAGATTC	GACTACAGT	TAT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAAAAATAAGAGATTCGACTACAGTTATTAC	TKNKRFDYSYY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  I  T  F  S  S  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2327   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCCGGAATCACCTTTAGCAGCTTTGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (228/248)  IGHV3-23*01  47   ........................C...T...T...............A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  T  I  S  G  S  A  V  A  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2327   91   AGTGGGTGGCAACTATTAGCGGTAGTGCAGTTGCCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.9% (228/248)  IGHV3-23*01  137  .......CT..G.......T.......GT.G.AG........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  V  Y  L  Q  M  N  A  L  R  A  E  D  T  A  V  Y  Y  C  T  K  N  K  R  F  D  Y  S  
                    Query_2327   181  AGAACACGGTGTATCTGCAAATGAACGCCCTGAGAGCCGAGGACACGGCCGTTTACTACTGCACGAAAAATAAGAGATTCGACTACAGTT  270
V  91.9% (228/248)  IGHV3-23*01  227  ........C.................AG........................A..T.....TG.....----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD4-4*01   2    --------------------------------------------------------------------------------.........-  10

                                      ---->                                  
                                      Y  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_2327   271  ATTACTGGGGCCAGGGAACCCTGGTCTCGGTCTCCTCAG  309
J  94.6% (35/37)    IGHJ4*02     12   --........................A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_22992

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_2328   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*01  49   .......................................AG....T..............A.............A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2328   91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.0% (227/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_2328   181  CAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.0% (227/244)  IGHV4-59*01  229  ...............C...G...........................G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_2328   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_22993

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           358     4e-101
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCACCCAA	TATGGTTCGGAGAGT	CTG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCACCCAATATGGTTCGGAGAGTCTG	ARATQYGSESL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	259	30	0	89.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_2329   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACTTCCTAT  91
V  89.6% (259/289)  IGHV1-18*01  7    .................................................A.................................CAG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  S  W  V  R  Q  A  P  G  G  G  L  E  W  M  G  W  S  G  P  N  N  D  D  A  H  Y  G  H 
                    Query_2329   92   GGTGTCAGCTGGGTGCGCCAGGCCCCTGGAGGAGGGCTTGAATGGATGGGATGGAGCGGCCCTAACAATGATGACGCACACTATGGACAT  181
V  89.6% (259/289)  IGHV1-18*01  97   ...A.............A............CA.........G.............T.A..G..T......G.A..A..A......C...G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  L  R  G  R  V  T  I  T  T  D  T  S  T  T  T  S  F  M  E  L  R  S  L  R  S  A  D  T  A 
                    Query_2329   182  AGCCTCCGGGGCAGAGTCACCATTACCACAGACACATCAACGACCACATCCTTCATGGAGTTGAGGAGCCTGAGATCTGCCGACACGGCC  271
V  89.6% (259/289)  IGHV1-18*01  187  .AG....A...............G..............C....G....G...A.......C..................A..........  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  A  T  Q  Y  G  S  E  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2329   272  GTATATTACTGTGCGAGAGCCACCCAATATGGTTCGGAGAGTCTGTGGGGCCAGGGAACCCTGGTCACAGTCTCCTCAG  350
V  89.6% (259/289)  IGHV1-18*01  277  ..G................------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                              
D  93.3% (14/15)    IGHD3-10*01  8    ---------------------------..........G....-------------------------------------  22
J  97.1% (33/34)    IGHJ4*02     15   ---------------------------------------------.......................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_177745

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*05                                                                                           346     2e-97
IGHD3-10*01                                                                                           33.4    1e-05
IGHJ1*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*05	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GAG	ACTATGGCTCGGGGAGTTAT	CCCCTTG	AGCAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGGAGACTATGGCTCGGGGAGTTATCCCCTTGAGCAC	TTGDYGSGSYPLEH	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	238	17	0	93.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  V  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2330   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTGTCAGTGTCGCCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.3% (238/255)  IGHV3-15*05  47   .......T..............................T.....AA...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  D  R  F  T  I  S  R  N  
                    Query_2330   91   AGTGGGTTGGCCGTATTAAGAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAGGACAGATTCACCATCTCAAGAAATG  180
V  93.3% (238/255)  IGHV3-15*05  137  ...................A............................................A.G...................G...  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  N  T  V  H  L  Q  M  N  S  V  K  T  E  D  T  A  V  Y  Y  C  T  T  G  D  Y  G  S  
                    Query_2330   181  ATTCAAAAAACACAGTACACCTGCAAATGAACAGTGTGAAGACCGAGGACACAGCCGTGTATTATTGTACCACAGGAGACTATGGCTCGG  270
V  93.3% (238/255)  IGHV3-15*05  227  .............GC.GT.T...............C....A.......................C..........---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  95.0% (19/20)    IGHD3-10*01  6    ------------------------------------------------------------------------------.......T....  17

                                      IMGT--------------->                                  
                                      G  S  Y  P  L  E  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2330   271  GGAGTTATCCCCTTGAGCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  95.0% (19/20)    IGHD3-10*01  18   ........----------------------------------------------  25
J  97.4% (38/39)    IGHJ1*01     14   ---------------................C......................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_22995

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            397     8e-113
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGG	TAGTGGGAG	TAAATTAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGGTAGTGGGAGTAAATTATTTTGACTGG	ARDRVVGVNYFDW	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	10	78	69	67	2	0	97.1
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  G  Y 
                    Query_2331   10   CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACAGTTTCAGTGGCTAT  99
V  93.8% (272/290)  IGHV1-3*01   7    .....T...........G..........................................................CC....C.A.....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  I  G  W  I  N  P  G  Y  G  N  T  R  Y  S  Q 
                    Query_2331   100  GCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATCGGATGGATCAACCCTGGTTATGGTAATACAAGATATTCACAG  189
V  93.8% (272/290)  IGHV1-3*01   97   ...............................................G............G....CA.......C....A..........  186
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  I  T  E  D  T  S  A  S  T  A  Y  M  E  L  R  S  L  R  S  E  D  T  A 
                    Query_2331   190  AAGTTCCAGGGCAGAGTCACCATCACCGAGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGAGGACACGGCT  279
V  93.8% (272/290)  IGHV1-3*01   187  .......................T...AG....................................C..............A.........  276
                                       K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><--------------CDR3-IMGT-------------->                                  
                                       V  Y  Y  C  A  R  D  R  V  V  G  V  N  Y  F  D  W  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2331   280  GTCTATTACTGTGCGAGAGATCGGGTAGTGGGAGTAAATTATTTTGACTGGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  364
V  93.8% (272/290)  IGHV1-3*01   277  ..G.................-----------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                    
D  100.0% (9/9)     IGHD1-26*01  5    -------------------------.........---------------------------------------------------  13
J  95.3% (41/43)    IGHJ4*02     6    ------------------------------------------.......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_177747

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	RDMGMIVGVTFTTSTVWTS	282	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	68	64	60	3	1	93.8
CDR1-IMGT	69	92	24	23	1	0	95.8
FR2-IMGT	93	143	51	49	2	0	96.1
CDR2-IMGT	144	167	24	22	2	0	91.7
FR3-IMGT	168	281	114	108	6	0	94.7
CDR3-IMGT (germline)	282	289	8	8	0	0	100
Total	N/A	N/A	285	270	14	1	94.7


Alignments

                                      <---------------------------FR1-IMGT---------------------------><-------CDR1-IMGT------><-
                                        V  Q   L  V  Q  R  *  E  S  P  G  S  L  *  R  S  P  V  R  F  L  D  T  A  L  P  T  T  G  
                    Query_2332   6    GGTGCAG-CTGGTGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTACTGGAT  94
V  94.7% (270/285)  IGHV5-51*01  12   .......T....A..........A...................................G....................G.........  101
                                        V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W  I

                                      -------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------------
                                      S  P  G  C  A  R  C  P  G  K  V  W  S  G  W  G  S  C  I  L  V  T  L  I  S  D  T  A  R  P  
                    Query_2332   95   CGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCCGTCCTT  184
V  94.7% (270/285)  IGHV5-51*01  102  ..G...........................C....................C...................C..................  191
                                        G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S  F

                                      ------------------------------------FR3-IMGT----------------------------------------------
                                      S  K  A  R  S  P  S  Q  P  T  S  P  S  V  P  P  T  Y  S  G  A  A  *  R  P  R  T  P  P  H  
                    Query_2332   185  CGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCGCCACATA  274
V  94.7% (270/285)  IGHV5-51*01  192  .C.....................................C...........G......A...........................TG..  281
                                        Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M  Y

                                      ------><-----------------------CDR3-IMGT----------------------->                          
                                      I  T  V  R  D  M  G  M  I  V  G  V  T  F  T  T  S  T  V  W  T  S  G  A  K  G  P  R  S  P  
                    Query_2332   275  TTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  364
V  94.7% (270/285)  IGHV5-51*01  282  ...............---------------------------------------------------------------------------  296
                                        Y  C  A  R                                                                              
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------..........C...-----------------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------.......A..........................................  55

                                             
                                      S  P   
                    Query_2332   365  CTCCTCA  371
J  98.2% (56/57)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_22997

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           352     3e-99
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCG	TACGGTGGCTAC	ATGAGAC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCGTACGGTGGCTACATGAGACACTTTGACTAC	ARVPYGGYMRHFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2333   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATAACTATGAGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-48*03  47   ..........................................G..GT.....A.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  I  S  Y  I  S  S  S  G  R  T  I  D  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_2333   91   AGTATATTTCATACATTAGTAGTAGTGGTAGAACCATAGACTACGCAGACTCTGTGAGGGGCCGCTTCACCATCTCCAGAGACAACGCCG  180
V  95.2% (237/249)  IGHV3-48*03  137  ...GGG.........................T......T..................A......A........................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  Y  G  G  Y  M  
                    Query_2333   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGTCCCGTACGGTGGCTACATGA  270
V  95.2% (237/249)  IGHV3-48*03  227  .....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD4-17*01  5    --------------------------------------------------------------------------.......A....----  16

                                      ------------->                                  
                                      R  H  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_2333   271  GACACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  97.8% (44/45)    IGHJ4*02     4    ---........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_5375

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           442     2e-126
IGHD3-16*01                                                                                           12.2    36    
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTTGAGG	GATTAC	CAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTAC	ARSLRDYQPFYFDY	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	73	1	0	98.6
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	112	2	0	98.2
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	288	5	0	98.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  
                    Query_2334   2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCA  91
V  98.3% (288/293)  IGHV5-51*03  2    ..G..............................................................................G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_2334   92   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  181
V  98.3% (288/293)  IGHV5-51*03  92   G.........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_2334   182  GCCCGTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  98.3% (288/293)  IGHV5-51*03  182  ..........................A...............................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  A  R  S  L  R  D  Y  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  
                    Query_2334   272  CTGCCATGTATTACTGTGCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCT  361
V  98.3% (288/293)  IGHV5-51*03  272  .C.....................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD3-16*01  8    --------------------------------......----------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ----------------------------------------------....................A.......................  45

                                         
                                      S  
                    Query_2334   362  CAG  364
J  97.9% (46/47)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_5376

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           433     1e-123
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	290	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	73	1	0	98.6
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	285	8	0	97.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_2335   3    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCA  92
V  97.3% (285/293)  IGHV5-51*03  2    ..G...............................................................................C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_2335   93   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  182
V  97.3% (285/293)  IGHV5-51*03  92   G.........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_2335   183  GTCCGTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  97.3% (285/293)  IGHV5-51*03  182  .C..........................C....C....A..................A................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_2335   273  CCGCCATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  362
V  97.3% (285/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)   IGHD6-19*01  4    --------------------------------------...............-------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   --------------------------------------------------------..................................  45

                                         
                                      S  
                    Query_2335   363  CAG  365
J  100.0% (37/37)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_5377

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD3-16*02                                                                                           18.0    0.68  
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATGATAGTGGC	AGTTATCTTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGCAGTTATCTTTATTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_2336   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    .............................................................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  D  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_2336   91   CTGGATCGACTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCGGGTGACTCTGATGCCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G......................................................T............A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  I  T  I  S  A  D  N  S  I  G  T  A  Y  L  Q  L  H  S  L  K  A  S  D  T  A
                    Query_2336   181  GTCCTTCGAAGGCCAAATCACCATCTCAGCCGACAACTCCATCGGCACCGCCTACCTGCAGTTGCACAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .......C.......GG...................G......A..................G.AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  H  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_2336   271  CATGTATCACTGTGCGAGACATGGGGATGATAGTGGCAGTTATCTTTATTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  .......T.............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD3-16*02  23   -------------------------------------.......G....-----------------------------------------  34
J  98.1% (53/54)    IGHJ6*02     9    -------------------------------------------------....A....................................  49

                                                   
                                        T  V  S  S 
                    Query_2336   361  CACCGTCTCCTCA  373
J  98.1% (53/54)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_5370

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           325     3e-91
IGHD6-13*01                                                                                           14.1    8.6  
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-13*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGCGTTCACACTGT	CTGGTAC	GG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCGCGTTCACACTGTCTGGTACGGCTACTACGCTATGGACGTC	AKDRVHTVWYGYYAMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  D  Y  G  M  H  W  A  R  *  A  P  G  K  G  L  
                    Query_2337   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTGACTATGGCATGCACTGGGCCCGCTAGGCTCCGGGCAAGGGGCTGC  90
V  91.6% (229/250)  IGHV3-30*18  47   ...................................A........AG.................T....C.......A............G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      R  W  V  S  F  I  S  Y  D  E  T  T  T  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  G  N  S  
                    Query_2337   91   GGTGGGTGTCATTTATATCATATGATGAAACTACTACATACTATGCAGACTCCGTGAAGGGCCGATTCTCCATCTCCAGAGGCAATTCGA  180
V  91.6% (229/250)  IGHV3-30*18  137  A.......G..G...............G..G..A..A...............................A............A......C.  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  F  L  Q  L  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  R  V  H  T  V  W  
                    Query_2337   181  AGAACACGCTGTTTCTGCAACTGAACAGCCTGAGACCTGAGGACACGGCTGTCTATTACTGTGCGAAAGACCGCGTTCACACTGTCTGGT  270
V  91.6% (229/250)  IGHV3-30*18  227  ............A.......A..............G................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------------.....  19

                                      GT-------------------->                                 
                                      Y  G  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2337   271  ACGGCTACTACGCTATGGACGTCTGGGGCCAAGGCACCACGGTCACCGTCTCCTCA  326
D  100.0% (7/7)     IGHD6-13*01  20   ..------------------------------------------------------  21
J  96.2% (50/52)    IGHJ6*02     11   ----........G.....................G.....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_5371

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           400     9e-114
IGHD1-26*01                                                                                           12.2    37    
IGHJ3*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ATAGCGGAAACTACT	TATGTTAGAGACTC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGATAGCGGAAACTACTTATGTTAGAGACTCTGATGCTTTTGATATC	ARDRIAETTYVRDSDAFDI	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  A  K  V  S  C  K  A  S  G  Y  T  F  N  N  Y 
                    Query_2338   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGCGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTCAATAACTAT  91
V  94.1% (273/290)  IGHV1-18*01  7    ..............................................T..................T..............T.CC.G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  I  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_2338   92   GGTTTCATCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAG  181
V  94.1% (273/290)  IGHV1-18*01  97   ...A...G..................................................................................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  K  G  R  F  T  M  T  T  N  T  S  T  S  T  A  S  V  E  L  R  S  L  R  S  D  D  T  A 
                    Query_2338   182  AAATTCAAGGGCAGATTCACCATGACCACGAACACATCCACGAGCACAGCCTCCGTGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.1% (273/290)  IGHV1-18*01  187  ..GC..C........G.............AG.....................A.A...................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  A  R  D  R  I  A  E  T  T  Y  V  R  D  S  D  A  F  D  I  W  G  Q  G  T  M  V 
                    Query_2338   272  GTGTATTACTGCGCGAGAGATCGGATAGCGGAAACTACTTATGTTAGAGACTCTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTC  361
V  94.1% (273/290)  IGHV1-18*01  277  ...........T........----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  80.0% (12/15)    IGHD1-26*01  4    ------------------------....T..G.G.....---------------------------------------------------  18
J  100.0% (50/50)   IGHJ3*02     1    -----------------------------------------------------.....................................  37

                                                   
                                       T  V  S  S  
                    Query_2338   362  ACCGTCTCTTCAG  374
J  100.0% (50/50)   IGHJ3*02     38   .............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_139599

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           350     9e-99
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCCCTCCCCTCTC	ATGATAGTAGTGCTTATTAC	GTCGCGT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGCCCTCCCCTCTCATGATAGTAGTGCTTATTACGTCGCGTACAACTACTTCGACCCC	ARDALPSHDSSAYYVAYNYFDP	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  G  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2339   1    GGTCCCTGAGACTCTCCTGTGGAGCCTCTGGATTCACCTTCAGTACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-21*01  47   .....................C.......................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  N  N  Y  H  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2339   91   AGTGGGTCTCGTCCATTAGTAGTAATAATTATCACACATATTATGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (237/250)  IGHV3-21*01  137  ..........A.............G..G.AG.T...T...C..C..............................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  A  L  P  S  H  D  
                    Query_2339   181  AGAACTCACTGTATCTGCAAATGAACAGCCTCAGAGCCGAGGACACGGCTGTGTACTACTGTGCGAGAGATGCCCTCCCCTCTCATGATA  270
V  94.8% (237/250)  IGHV3-21*01  227  ...............................G.......................T..............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.0% (19/20)    IGHD3-22*01  9    ------------------------------------------------------------------------------------......  14

                                      -CDR3-IMGT--------------------------->                                  
                                      S  S  A  Y  Y  V  A  Y  N  Y  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2339   271  GTAGTGCTTATTACGTCGCGTACAACTACTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
D  95.0% (19/20)    IGHD3-22*01  15   ......G.......----------------------------------------------------------  28
J  96.1% (49/51)    IGHJ5*02     1    ---------------------......GG...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_139596

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           347     7e-98
IGHD1-26*01                                                                                           10.3    117  
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TAGTG	CGTCCGCTCGAGTTTTA	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATAGTGCGTCCGCTCGAGTTTTAGACGTC	ARDSASARVLDV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  D  A  S  G  F  T  F  S  S  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2340   1    GGTCCCTGAGACTCTCCTGTGACGCCTCTGGATTCACCTTTAGTAGCCACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-74*01  47   .....................CA.................C......T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  S  T  D  G  S  R  T  T  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  T  
                    Query_2340   91   TGTGGGTCTCACGTATTAGTACTGATGGGAGTCGCACAACCTACGTGGACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  94.4% (236/250)  IGHV3-74*01  137  ..................A..G..........A......G.....C..........A.............................G...  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  A  S  A  R  V  
                    Query_2340   181  AGAACACACTGTATCTGCAATTGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGAGATAGTGCGTCCGCTCGAGTTT  270
V  94.4% (236/250)  IGHV3-74*01  227  .......G............A...............................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  5    ----------------------------------------------------------------------.....---------------  9

                                      ------->                                 
                                      L  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_2340   271  TAGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  311
J  97.4% (38/39)    IGHJ6*02     24   --............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_139597

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            382     3e-108
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTATTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2341   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_2341   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  98.8% (247/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  H  C  A  R  E  K  T  A  A  V  V  
                    Query_2341   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATCACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  98.8% (247/250)  IGHV3-7*01   227  ........................................................T.............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2341   271  TTGACTATTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  94.9% (56/59)    IGHJ6*02     4    ---....C..C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_139594

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            420     7e-120
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	274	5	0	98.2


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_2342  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  98.2% (274/279)  IGHV6-1*01  26   ...........................................................G......G....AG.................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_2342  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.2% (274/279)  IGHV6-1*01  116  ..........................................................................................  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_2342  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.2% (274/279)  IGHV6-1*01  206  ..............A...........................................................................  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------CDR3-IMGT--------->                                  
                                     C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2342  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  98.2% (274/279)  IGHV6-1*01  296  .........---------------------------------------------------------  304
                                     C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02    4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_139595

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ4*01                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGGGG	GTGGCTAC	CC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGAGGGGGGTGGCTACCCGACTAC	TRGGGWLPDY	261	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	23	1	0	95.8
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	103	11	0	90.4
CDR3-IMGT (germline)	261	267	7	6	1	0	85.7
Total	N/A	N/A	267	244	23	0	91.4


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  P  L  T  C  S  V  S  G  G  S  I  S  G  Y  Y  W  S  W  I  R  
                    Query_2343   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGCCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGATCCGGC  90
V  91.4% (244/267)  IGHV4-59*01  26   ................T............T............C......................A........................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  N  I  R  H  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  T  
                    Query_2343   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGCAACATCCGTCACAGTGGGACCACCACCTACAATCCCTCACTCAAGAGTCGAGTCACCA  180
V  91.4% (244/267)  IGHV4-59*01  116  ...............................GT.T...TA.T.........G.....A......C.....C...................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      M  S  L  D  T  S  K  N  I  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  T  R  G  
                    Query_2343   181  TGTCACTAGACACGTCCAAGAACATCTTCTCCCTGAAGCTGAGTTCTGTGACCGCTGCGGACACGGCCATTTATTACTGTACGAGAGGAG  270
V  91.4% (244/267)  IGHV4-59*01  206  .A...G.................CAG.................C........................G.G.........G......---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -CDR3-IMGT--------->                                  
                                      G  G  W  L  P  D  Y  W  G  Q  G  A  L  V  T  V  S  A  
                    Query_2343   271  GGGGGTGGCTACCCGACTACTGGGGCCAAGGAGCCCTGGTCACCGTCTCCGCAG  324
D  100.0% (8/8)     IGHD5-12*01  10   ----........------------------------------------------  17
J  95.0% (38/40)    IGHJ4*01     9    --------------..................A.................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_139592

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           419     2e-119
IGHD4-17*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGGCCC	CTACGGTGACTAC	CCGTCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGCCCCTACGGTGACTACCCGTCATACTACTTTGACTAC	AREGPYGDYPSYYFDY	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	70	1	0	98.6
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	111	3	0	97.4
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	292	280	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  A  S  G  G  T  F  N  S  
                    Query_2344   7    TGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGGCTTCTGGAGGCACCTTCAACAGCT  96
V  95.9% (280/292)  IGHV1-69*01  5    ...............................................................A....................G.....  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  V  I  S  W  M  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  I  T  N  Y  A  
                    Query_2344   97   ATGTTATCAGTTGGATGCGACAGGCCCCTGGACAAGGGCTCGAGTGGATGGGCGGGATCATCCCTATCTTTGGTATAACAAACTACGCAC  186
V  95.9% (280/292)  IGHV1-69*01  95   ...C......C...G.........................T...........A......................C.G............  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  R  V  T  I  T  A  A  E  S  T  S  T  A  Y  M  E  L  S  S  L  K  S  E  D  T  
                    Query_2344   187  AGAAGTTCCAGGGCAGAGTCACGATTACCGCGGCCGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAAATCTGAGGACACGG  276
V  95.9% (280/292)  IGHV1-69*01  185  .................................A.........................................G..............  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-------------------CDR3-IMGT------------------>                            
                                      A  L  Y  Y  C  A  R  E  G  P  Y  G  D  Y  P  S  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_2344   277  CCCTGTATTACTGTGCGAGAGAAGGCCCCTACGGTGACTACCCGTCATACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  366
V  95.9% (280/292)  IGHV1-69*01  275  ..G...................--------------------------------------------------------------------  296
                                      A  V  Y  Y  C  A  R                                                                       
D  100.0% (13/13)   IGHD4-17*01  4    ----------------------------.............-------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_2344   367  CCTCAG  372
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_139593

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           369     2e-104
IGHD5-12*01                                                                                           23.8    0.011 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCTGCTATCGGATACTTT	GTGGCTACGATT	CGGGTGAGGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTGCTATCGGATACTTTGTGGCTACGATTCGGGTGAGGGCATGGACGTC	ARLCYRILCGYDSGEGMDV	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  S  T  N  F  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_2345   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGGAGTACTAATTTCTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  97.2% (243/250)  IGHV4-39*01  49   ...............................G.........C....G..G..A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2345   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  97.2% (243/250)  IGHV4-39*01  139  ..........................................................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  D  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  C  Y  R  I  L  C 
                    Query_2345   181  AAGGACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACTCTGCTATCGGATACTTTGT  270
V  97.2% (243/250)  IGHV4-39*01  229  ...A.....................G............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD5-12*01  10   ----------------------------------------------------------------------------------------..  11

                                      3-IMGT----------------------->                                 
                                       G  Y  D  S  G  E  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2345   271  GGCTACGATTCGGGTGAGGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
D  100.0% (12/12)   IGHD5-12*01  12   ..........-----------------------------------------------------  21
J  100.0% (42/42)   IGHJ6*02     21   ---------------------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_139590

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         318     6e-89
IGHD2-15*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCCCTCAG	ATTGTAGTG	ATGACAGGTGCAACAACGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCCCTCAGATTGTAGTGATGACAGGTGCAACAACGCGTTTGACTAC	ARGPSDCSDDRCNNAFDY	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  F  S  I  S  R  G  Y  F  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_2346     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCAGCAGGGGTTATTTCTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  91.4% (224/245)  IGHV4-38-2*01  49   ...............................A............T.....C.A.....................................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  A  S  I  Y  H  N  G  A  A  F  S  T  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_2346     91   GAGTGGATTGCAAGTATCTATCATAATGGGGCCGCCTTCTCCACCCCGTCCCTCAAGAGTCGGGTCACCATATCAGTTGACACGTCCAAG  180
V  91.4% (224/245)  IGHV4-38-2*01  139  ..........GG.............G....AG.A...A..A..A..................A..............A............  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                         N  Q  F  S  L  K  V  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  G  P  S  D  C  S  D  D 
                    Query_2346     181  AACCAGTTCTCCCTGAAGGTGACGTCTGTGACTGCCGCAGACACGGCCTTATATTACTGTGCGAGGGGCCCCTCAGATTGTAGTGATGAC  270
V  91.4% (224/245)  IGHV4-38-2*01  229  ..................C...GC........C...............G.G..............-------------------------  293
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (9/9)     IGHD2-15*01    6    ----------------------------------------------------------------------------.........-----  14

                                        GT--------------------->                                  
                                         R  C  N  N  A  F  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_2346     271  AGGTGCAACAACGCGTTTGACTACTGGGGCCAGGGAACACTGGTCATCGTCTCCTCAG  328
J  95.3% (41/43)    IGHJ4*02       6    ---------------.......................C.......C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_139591

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGACC	TACGATTTTTGGAG	GGACC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGACCTACGATTTTTGGAGGGACCACTACTACGCTATGGACGTC	ARVTYDFWRDHYYAMDV	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  T  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_2347   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACCACTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   ...............................G........G..G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  V  Y  Y  I  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S 
                    Query_2347   91   CTGGAATGGATTGGGACTGTCTATTATATTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....G..........G.A.........G.............................A.....................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  R  L  S  S  L  T  A  A  D  T  A  V  Y  H  C  A  R  V  T  Y  D  F  W  R 
                    Query_2347   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTTTGACCGCCGCAGACACGGCTGTCTATCACTGTGCGAGGGTGACCTACGATTTTTGGAGG  270
V  94.8% (235/248)  IGHV4-39*01  229  ...................A..........G......................G...T..........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (14/14)   IGHD3-3*01   5    ---------------------------------------------------------------------------..............-  18

                                      MGT-------------------->                                 
                                       D  H  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_2347   271  GACCACTACTACGCTATGGACGTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  327
J  94.3% (50/53)    IGHJ6*02     10   ----.........G..................A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_254817

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           378     3e-107
IGHD3-3*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TGTCTAGGGGCACC	CGATTTTTGGAGTGG	CTGCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGTCTAGGGGCACCCGATTTTTGGAGTGGCTGCCCTTTGACTGC	ARLSRGTRFLEWLPFDC	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  L  I  R  Q  P  P  G  K  G 
                    Query_2348   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTTGATCCGCCAGCCCCCAGGGAAGGGG  90
V  98.4% (246/250)  IGHV4-39*01  49   ................................................................G.........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2348   91   CTGGAGTGGATTGGAAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  98.4% (246/250)  IGHV4-39*01  139  ..............G...........................................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  N  L  I  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  S  R  G  T  R  F 
                    Query_2348   181  AAGAACCAGTTCTCCCTGAATCTGATCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACTGTCTAGGGGCACCCGATTT  270
V  98.4% (246/250)  IGHV4-39*01  229  ....................G....G............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (15/15)   IGHD3-3*01   7    ------------------------------------------------------------------------------------......  12

                                      MGT-------------------->                                  
                                       L  E  W  L  P  F  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2348   271  TTGGAGTGGCTGCCCTTTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  100.0% (15/15)   IGHD3-3*01   13   .........-------------------------------------------------  21
J  97.7% (43/44)    IGHJ4*02     5    --------------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_254816

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           413     2e-117
IGHD2-2*02                                                                                            10.3    143   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCTAAAACAGGCCCAGAA	ATACC	CGACCCCCG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCTAAAACAGGCCCAGAAATACCCGACCCCCGACTTCGGTATGGACGTC	ETSKTGPEIPDPRLRYGR	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	46	5	0	90.2
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	291	115	112	2	1	97.4
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	294	281	12	1	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_2349   4    AGGTCCAGCTTGTGCAGTCTGGAGCAGAAGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  93
V  95.6% (281/294)  IGHV5-51*03  2    ....G.....G.................G.............................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  R  L  P  G  K  G  L  R  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_2349   94   ATTACTGGATCGCCTGGGTGCGCCGGCTGCCCGGGAAAGGCCTGAGGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  183
V  95.6% (281/294)  IGHV5-51*03  92   GC..........G...........A.A.................GA............................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  P  R  P  G  H  H  L  S  R  Q  V  H  Q  H  R  L  P  A  L  E  Q  P  E  G  L  G  
                    Query_2349   184  GCCCGTCCTTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGCACCGCCTACCTGCACTGGAGCAGCCTGAAGGCCTCGGAC  273
V  95.6% (281/294)  IGHV5-51*03  182  ........-...............................A........................G........................  270
                                      S  P  S   F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                      H  R  H  V  L  L  C  E  T  S  K  T  G  P  E  I  P  D  P  R  L  R  Y  G  R  L  G  P  R  D  
                    Query_2349   274  ACCGCCATGTATTACTGTGCGAGACCTCTAAAACAGGCCCAGAAATACCCGACCCCCGACTTCGGTATGGACGTCTGGGGCCAAGGGACC  363
V  95.6% (281/294)  IGHV5-51*03  271  ........................------------------------------------------------------------------  294
                                       T  A  M  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD2-2*02   27   --------------------------------------------.....-----------------------------------------  31
J  96.0% (48/50)    IGHJ6*02     13   ----------------------------------------------------------...A............................  44

                                                        
                                      R  G  H  R  L  L  
                    Query_2349   364  GCGGTCACCGTCTCCTCA  381
J  96.0% (48/50)    IGHJ6*02     45   A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_323775

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2350   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_2350   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_2350   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2350   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_323774

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD2-8*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TAATGGTGT	GGCAGTGGCTAGAAGATTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAATGGTGTGGCAGTGGCTAGAAGATTTTTTGACTCC	ARDNGVAVARRFFDS	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  I  S  G  G  S  F  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  E  G  L  E 
                    Query_2351   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGGCTCCTTCAGTTCTTATTACTGGAGCTGGATTCGGCAGTCCCCAGGGGAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   .....................G..............A.....AG...C..............C......C........A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2351   91   TGGATTGGCTATGTCTACTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G...A....T..C.....................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  N  G  V  A  V  A  R  R 
                    Query_2351   181  CAGTTCTCCCTGAGGCTGACGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATAATGGTGTGGCAGTGGCTAGAAGA  270
V  93.5% (229/245)  IGHV4-59*01  229  .............A.....GC..........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD2-8*01   13   -----------------------------------------------------------------.........----------------  21

                                      ----------->                                  
                                       F  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_2351   271  TTTTTTGACTCCTGGGGCCAGGGAATCCTGGTCACCGTTTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.......A..............C............C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_323773

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TGGGCCTC	CTATGATAATAGTGGTCATTAC	GGCCCGCGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATGGGCCTCCTATGATAATAGTGGTCATTACGGCCCGCGATTTGACTCC	AKWASYDNSGHYGPRFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  D  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2352   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGGGATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.5% (227/248)  IGHV3-23*01  47   ..............................................CT..........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  H  S  V  D  H  T  F  Y  A  D  S  V  K  G  R  F  I  V  S  R  D  N  S  
                    Query_2352   91   AGTGGGTCTCAAGTATTAGTCATAGTGTTGATCACACATTCTACGCAGACTCCGTGAAGGGCCGATTCATCGTCTCCAGAGACAATTCCA  180
V  91.5% (227/248)  IGHV3-23*01  137  ...........GC.......GG.....G..G.AG.....A........................G....C.A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  L  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  W  A  S  Y  D  N  S  
                    Query_2352   181  AGAACACTCTCTATCTGCTAATGAGTAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAATGGGCCTCCTATGATAATAGTG  270
V  91.5% (227/248)  IGHV3-23*01  227  .......G..G.......A.....AC..........................A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.9% (20/22)    IGHD3-22*01  7    ----------------------------------------------------------------------------........G.....  20

                                      IMGT--------------------->                                
                                      G  H  Y  G  P  R  F  D  S  W  G  Q  G  A  L  V  T  V  S  S
                    Query_2352   271  GTCATTACGGCCCGCGATTTGACTCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTC  328
D  90.9% (20/22)    IGHD3-22*01  21   ..T.....--------------------------------------------------  28
J  95.1% (39/41)    IGHJ4*02     6    -----------------.......A.............A...................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_254812

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           293     2e-81
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	99	15	0	86.8
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	215	28	0	88.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_2353   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAGT  93
V  88.5% (215/243)  IGHV4-59*01  50   .....TCC...A.........................C...A..T.........GC....................G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N  
                    Query_2353   94   GGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCATTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAATC  183
V  88.5% (215/243)  IGHV4-59*01  140  .......G...A.........G.................A..CC......A.....................TA...A..........C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P  
                    Query_2353   184  AGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCCT  273
V  88.5% (215/243)  IGHV4-59*01  230  ..........G...C....C...........T............G.G....A...........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD7-27*01  4    ----------------------------------------------------------------........------------------  11
J  95.7% (44/46)    IGHJ5*02     6    -----------------------------------------------------------------------------.............  18

                                                                       
                                      W  G  Q  G  A  L  V  S  V  S  S  
                    Query_2353   274  GGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  306
J  95.7% (44/46)    IGHJ5*02     19   ...........A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_254811

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD1-1*01                                                                                            14.1    9.2   
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GGGAGGGGG	CAACTGG	GAACCCTTTACCTACT	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	288	267	21	0	92.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  Y
                    Query_2354   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCTA  90
V  92.7% (267/288)  IGHV5-51*01  6    .................................................................G............C......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  L  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  I  V  F  P  D  D  S  D  T  R  Y  S  P
                    Query_2354   91   CTGGCTCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGATCGTTTTTCCTGATGACTCTGATACCAGATACAGCCC  180
V  92.7% (267/288)  IGHV5-51*01  96   ....A.............C..G.........A..........G............A.C.A.....G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  I  T  I  S  A  D  K  S  I  T  T  A  F  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_2354   181  GTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCACCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACACCGC  270
V  92.7% (267/288)  IGHV5-51*01  186  .......C.......GG...........................G........A...........G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------>                                                                     
                                        I  Y  Y  C  A  R  G  G  G  N  W  E  P  F  T  Y  W  A  R  E  P  W  S  P  S  P  Q 
                    Query_2354   271  CATCTATTACTGTGCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTACTGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  352
V  92.7% (267/288)  IGHV5-51*01  276  ...G...........G..----------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                   
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------.......------------------------------------------------  11
J  100.0% (32/32)   IGHJ4*02     17   --------------------------------------------------................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_323770

Length=316
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            358     3e-101
IGHD2-8*01                                                                                            12.2    29    
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	TGGTGT	GCGG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGGTGTGCGG	ASGVR	243	257	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  S  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2355  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAACAGTTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (238/247)  IGHV3-7*01  47   .............................................G.TA.........C...............................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  P  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2355  91   AGTGGGTGGCCAACATAAAGCCAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (238/247)  IGHV3-7*01  137  .....................A....................................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--CDR3-IMGT-->             
                                     K  S  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  G  V  R  W  G  Q  G  
                    Query_2355  181  AAAGCTCACTGTTTCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGTGGTGTGCGGTGGGGCCAGGGAA  270
V  96.4% (238/247)  IGHV3-7*01  227  .G.A........A.......................C..............................-----------------------  293
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD2-8*01  16   -------------------------------------------------------------------......-----------------  21
J  100.0% (34/34)   IGHJ4*02    15   -----------------------------------------------------------------------------.............  27

                                                          
                                     T  L  V  T  V  S  S  
                    Query_2355  271  CCCTGGTCACCGTCTCCTCAG  291
J  100.0% (34/34)   IGHJ4*02    28   .....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30515799


Query= Query_163184

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           299     2e-83
IGHD7-27*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GCCCG	AACTGGGGA	CCCCTTTATTTTACTC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGGCCCGAACTGGGGACCCCTTTATTTTACTCAC	TTGPNWGPLYFTH	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	126	30	17	5	8	56.7
FR3-IMGT	127	239	114	104	9	1	91.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	255	225	21	9	88.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  D  D  A  W  M  S  W  V  R  Q  A  P  G  Q  G  L  
                    Query_2356   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCGTTTCGATGACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGCAGGGGCTGG  90
V  88.2% (225/255)  IGHV3-15*01  47   .......T...........................AC....AG.A...................................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  Q  S  H  T  D  V           D  Y  A  A  P  V  R  G  S  F  T  I  S  R  D  
                    Query_2356   91   AGTGGGTTGGCCGTATTCAAAGTCACACTGATGTTG---------ACTATGCTGCGCCCGTGAGAGGCAGTTTTACCATCTCAAGAGATG  171
V  88.2% (225/255)  IGHV3-15*01  137  .................A....CA.A.......G..GGACAACAG....C.....A.......A......A..C................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      D  S  R  K  M  V  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  G  P  N  W  G  
                    Query_2356   172  ATTCAAGAAAAATGGTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGGCCCGAACTGGGGAC  261
V  88.2% (225/255)  IGHV3-15*01  227  ......A...C.C.C............................................................---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (9/9)     IGHD7-27*01  3    --------------------------------------------------------------------------------.........-  11

                                      GT-------------->                                
                                      P  L  Y  F  T  H  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2356   262  CCCTTTATTTTACTCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  310
J  100.0% (34/34)   IGHJ4*02     13   ---------------..................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_323779

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           353     9e-100
IGHD6-13*01                                                                                           19.9    0.16  
IGHJ2*01                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCC	TAGCGGCGGCTGGTAC	TTTAGCG	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCTAGCGGCGGCTGGTACTTTAGCGGGTACTTCGATCTC	ARDPSGGWYFSGYFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  S  M  N  W  V  R  Q  A  P  E  K  G  L  
                    Query_2357   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGGAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGAGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-21*01  47   .....................................C.....T..C...............................G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  G  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  A  
                    Query_2357   91   AGTGGGTCTCATCCATTAGTAGTAGTGGTTCTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAAAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-21*01  137  ..........................A..AG...............................................G...........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  K  S  L  Y  L  Q  M  G  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  S  G  G  W  Y  
                    Query_2357   181  AGAAGTCACTGTATCTACAAATGGGCAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGACCCTAGCGGCGGCTGGTACT  270
V  95.2% (238/250)  IGHV3-21*01  227  ....C...........G......AA.............................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD6-13*01  6    -------------------------------------------------------------------------....A..A........-  21

                                      T------------------>                                  
                                      F  S  G  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2357   271  TTAGCGGGTACTTCGATCTCTGGGGCCGTGGCACCCTTGTCACTGTCTCCTCAG  324
J  97.9% (47/48)    IGHJ2*01     6    ------...............................G................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_254818

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           364     5e-103
IGHD2-2*01                                                                                            31.5    5e-05 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCGGAAT	TATTGTAGTAGTTCCACCTGCT	G	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCGGAATTATTGTAGTAGTTCCACCTGCTGCTTTGACTCC	AKRNYCSSSTCCFDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2358   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (240/247)  IGHV3-23*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  I  S  G  S  G  D  N  T  C  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2358   91   AGTGGGTCTCACTTATTAGTGGTAGTGGTGATAACACATGCTTCGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  97.2% (240/247)  IGHV3-23*01  137  ...........GC.................G..G.....A..A...............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  R  N  Y  C  S  S  S  
                    Query_2358   181  AGAATACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGCGGAATTATTGTAGTAGTTCCA  270
V  97.2% (240/247)  IGHV3-23*01  227  ....C..............................................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.9% (20/22)    IGHD2-2*01   5    --------------------------------------------------------------------------............A...  20

                                      ---------------->                                  
                                      T  C  C  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2358   271  CCTGCTGCTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  90.9% (20/22)    IGHD2-2*01   21   G.....---------------------------------------------  26
J  97.7% (43/44)    IGHJ4*02     5    -------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_3795

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           332     4e-93
IGHD3-22*01                                                                                           19.9    0.17 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ATCCT	GTACTACTATGAT	CGTGACGGTCGTATCCCCGGAGCGGGTTTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCAGAATCCTGTACTACTATGATCGTGACGGTCGTATCCCCGGAGCGGGTTTTTTTGACTAC	TRILYYYDRDGRIPGAGFFDY	249	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	233	21	0	91.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  V  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2359   1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGACTATGCTGTGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGACTGG  90
V  91.7% (233/254)  IGHV3-49*04  47   ..............................................T......A.............C.................G....  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  I  A  Y  I  R  S  K  G  Y  G  G  T  A  D  H  A  A  S  V  K  G  R  F  T  T  S  R  D  
                    Query_2359   91   AGTGGATTGCTTACATTAGAAGTAAAGGTTATGGTGGGACGGCAGACCACGCCGCGTCTGTAAAAGGCAGATTCACCACCTCAAGAGATG  180
V  91.7% (233/254)  IGHV3-49*04  137  .....G.A.G..T.........C....C............AA....AT.............G................T...........  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  S  T  A  Y  L  Q  M  N  S  L  K  I  E  D  T  G  V  Y  Y  C  T  R  I  L  Y  Y  Y  
                    Query_2359   181  ATTCCAAAAGCACCGCCTATCTGCAAATGAACAGCCTGAAAATCGAGGACACAGGCGTCTATTACTGTACCAGAATCCTGTACTACTATG  270
V  91.7% (233/254)  IGHV3-49*04  227  ............T.............................C...........C...G...........T...----------------  300
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  92.3% (12/13)    IGHD3-22*01  1    -------------------------------------------------------------------------------...T.......  11

                                      -----CDR3-IMGT-------------------------->                                  
                                      D  R  D  G  R  I  P  G  A  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2359   271  ATCGTGACGGTCGTATCCCCGGAGCGGGTTTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  345
D  92.3% (12/13)    IGHD3-22*01  12   ..-------------------------------------------------------------------------  13
J  100.0% (43/43)   IGHJ4*02     6    --------------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_3796

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD1-26*01                                                                                           10.3    112  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCGGAAGAA	GGGAG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGGAAGAAGGGAGATTGACTAC	AGGRREIDY	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	225	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  N  H  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2360   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTAATCACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.8% (225/240)  IGHV4-59*01  49   ........................................G..G.T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  D  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2360   91   TGGATTGGGTATCTTTATTACGATGGTGACACCAAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  93.8% (225/240)  IGHV4-59*01  139  ............A.C......AG...GAG......C......................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  G  R  R  E  I  D  Y  W  G 
                    Query_2360   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGGGCGGAAGAAGGGAGATTGACTACTGGGGC  270
V  93.8% (225/240)  IGHV4-59*01  229  ...............C...............................G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  9    ----------------------------------------------------------------------.....---------------  13
J  100.0% (42/42)   IGHJ4*02     7    ----------------------------------------------------------------------------..............  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_2360   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  100.0% (42/42)   IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_163185

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	232	12	0	95.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_2361   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  95.1% (232/244)  IGHV4-59*01  50   .....TCC...A...........................G..................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N  
                    Query_2361   94   GGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAACC  183
V  95.1% (232/244)  IGHV4-59*01  140  .......G...A..T...............................................................C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y  
                    Query_2361   184  AGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTACT  273
V  95.1% (232/244)  IGHV4-59*01  230  ..............C....C.......................................A....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD6-13*01  9    ----------------------------------------------------------------..........----------------  18
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2361   274  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_3791

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           431     4e-123
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	109	5	0	95.6
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	294	285	9	0	96.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 
                    Query_2362   4    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACC  93
V  96.9% (285/294)  IGHV5-51*03  1    .....G........G....................................................................C......  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 
                    Query_2362   94   AACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATAC  183
V  96.9% (285/294)  IGHV5-51*03  91   .G........................................................................................  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D 
                    Query_2362   184  AGTCCGTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGAC  273
V  96.9% (285/294)  IGHV5-51*03  181  ..C..........................C....C....A..................A...............................  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_2362   274  ACCGCCATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  363
V  96.9% (285/294)  IGHV5-51*03  271  ........................------------------------------------------------------------------  294
                                       T  A  M  Y  Y  C  A  R                                                                   
D  100.0% (15/15)   IGHD6-19*01  4    ---------------------------------------...............------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   ---------------------------------------------------------.................................  44

                                          
                                       S  
                    Query_2362   364  TCAG  367
J  100.0% (37/37)   IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_3792

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           286     1e-79
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ATTACTCTGGTTCGGGGA	AAAGTCAAGGATTTCGGAAAT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGATTACTCTGGTTCGGGGAAAAGTCAAGGATTTCGGAAATTGGCTCGACCCC	ARDRITLVRGKVKDFGNWLDP	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	217	34	0	86.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  D  G  G  Y  T  W  N  W  I  R  Q  H  P  Q  K  G 
                    Query_2363   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGTGATGGTGGTTATACCTGGAATTGGATCCGCCAGCACCCACAGAAGGGC  90
V  86.5% (217/251)  IGHV4-31*03  49   ...............................G.........CAG.........CTA.....GC..................GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  A  Y  S  G  R  A  D  Y  N  P  S  L  R  S  R  L  S  V  S  K  D  T  S 
                    Query_2363   91   CTGGAGTGGCTTGGGTCCATCGCTTACAGTGGGAGAGCCGATTACAATCCGTCCCTCAGGAGTCGACTTTCCGTGTCGAAAGACACGTCT  180
V  86.5% (217/251)  IGHV4-31*03  139  .........A......A....TA............CA..T.C.....C..........A.......G..A..A.A..AGT..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  V  S  L  N  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  I  T  L  V  R 
                    Query_2363   181  AAGAACCAGGTCTCCCTTAACGTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTATTGTGCGAGAGATCGGATTACTCTGGTTCGG  270
V  86.5% (217/251)  IGHV4-31*03  229  .........T.......G..GC...............................G.....C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  3    ---------------------------------------------------------------------------......A........  17

                                      CDR3-IMGT-------------------------->                                  
                                       G  K  V  K  D  F  G  N  W  L  D  P  W  G  Q  G  T  Q  V  I  V  T  S  
                    Query_2363   271  GGAAAAGTCAAGGATTTCGGAAATTGGCTCGACCCCTGGGGCCAGGGAACCCAGGTCATCGTCACCTCAG  340
D  94.4% (17/18)    IGHD3-10*01  18   ...-------------------------------------------------------------------  20
J  91.3% (42/46)    IGHJ5*02     6    ------------------------...T........................T.....C....T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_3793

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           316     2e-88
IGHD5-12*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	T	TGGTTACGAT	CGATTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTTGGTTACGATCGATTCCTTGACAAC	ARVGYDRFLDN	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  N  D  G  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  R 
                    Query_2364   1    ACCCTGTCCCTCACCTGCACTGTCTCGGGTGGCTCCGTCAACGATGGTAATTATTACTGGAGCTGGATCCGACAGCCCCCAGGGAAGAGA  90
V  90.4% (226/250)  IGHV4-61*01  49   ..........................T.............G.AG.....G...C.................G...............G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  F  I  Y  Y  T  G  S  T  T  D  N  P  S  L  K  S  R  V  T  M  S  V  D  T  P 
                    Query_2364   91   CTGGAGTGGATGGGGTTTATCTATTACACTGGGAGCACCACCGACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGCCC  180
V  90.4% (226/250)  IGHV4-61*01  139  ...........T....A...........G...........A.T...............................A.....A......T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  I  Q  F  S  L  R  L  W  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  V  G  Y  D  R  F  L 
                    Query_2364   181  AAGATCCAGTTCTCCCTGCGGCTATGGTCTGTGACCTCTGCGGACACGGCCGTGTATTACTGTGCCAGAGTTGGTTACGATCGATTCCTT  270
V  90.4% (226/250)  IGHV4-61*01  229  ....A.............AA...GA.C.........G............................G....--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD5-12*01  11   -----------------------------------------------------------------------...C......---------  20
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2364   271  GACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  97.6% (41/42)    IGHJ4*02     9    ...T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_3798

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            336     1e-94
IGHD3-10*01                                                                                           10.3    116  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GA	TCGGG	ATGGCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGATCGGGATGGCTCCCTGACTAC	VGGSGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2365   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGTGACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-7*01   47   ....................................C.......AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  E  K  D  G  S  E  K  N  Y  V  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2365   91   AGTGGGTGGCCAACATTGAGAAAGATGGAAGTGAGAAAAACTATGTGGACTCTCTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.2% (232/249)  IGHV3-7*01   137  ................AA..C.................T..............G....................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  A  L  Y  L  Q  M  D  S  L  R  V  E  D  A  A  V  Y  Y  C  V  G  G  S  G  W  L  P  D  
                    Query_2365   181  AGAACGCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACGCGGCTGTATATTACTGTGTGGGAGGATCGGGATGGCTCCCTGACT  270
V  93.2% (232/249)  IGHV3-7*01   227  .....T.............A...A............C.......A.......G..........C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   -----------------------------------------------------------------------.....--------------  18
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2365   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_3799

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           344     6e-97
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGCG	GGCTGG	G	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCTGGGAACTGGTTCGACCCC	ARGRRAGNWFDP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2366   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTGGGGCTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.0% (235/250)  IGHV4-31*03  49   .........................................C.....T.G............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  E  N  T  Q  Y  N  P  S  L  K  S  R  L  T  I  S  G  D  T  S 
                    Query_2366   91   CTGGAGTGGATTGGATACATCTATTACGGTGAGAACACCCAGTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGGAGACACGTCT  180
V  94.0% (235/250)  IGHV4-31*03  139  ..............G............A...G..G....T.C........................G............T..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       T  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  W 
                    Query_2366   181  ACGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCTGGGAACTGG  270
V  94.0% (235/250)  IGHV4-31*03  229  .A.................A.................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------......-------  18
J  98.0% (48/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  T  S  
                    Query_2366   271  TTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCACCTCAG  313
J  98.0% (48/49)    IGHJ5*02     9    ....................................T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_163183

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           346     2e-97
IGHD3-3*01                                                                                            14.1    8.2  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_2367   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGCC  93
V  94.7% (234/247)  IGHV4-31*03  50   .....TCC...A.....................C......C.............................C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_2367   94   TGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  94.7% (234/247)  IGHV4-31*03  140  ....G.........T.C.........................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  
                    Query_2367   184  AGAACCAGTTCTCCCTGAGGCTCAGCTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCG  273
V  94.7% (234/247)  IGHV4-31*03  230  ..................A...G................................T...........-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  100.0% (51/51)   IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2367   274  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (51/51)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_8078

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         433     1e-123
IGHD1-7*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCGTCC	GTATGACTGGAACTAC	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCGTCCGTATGACTGGAACTACCCCTTTGACTAC	ARHRPYDWNYPFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  E  Y  S  F  T  S  Y
                    Query_2368     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGAATCTCCTGTAAGGGTTCTGAATACAGCTTTACCAGCTA  90
V  97.9% (283/289)  IGHV5-10-1*01  6    ...................................................G...................G..................  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_2368     91   CTGGATCAGCTGGGTGCGTCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  97.9% (283/289)  IGHV5-10-1*01  96   ..................C.......................................................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  T  D  K  S  I  N  T  A  Y  V  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2368     181  GTCCTTCCAAGGCCACGTCACCATCTCAACTGACAAGTCCATCAACACTGCCTACGTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (283/289)  IGHV5-10-1*01  186  ............................G...............G..........C..................................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------CDR3-IMGT--------------->                                  
                                          M  Y  Y  C  A  R  H  R  P  Y  D  W  N  Y  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2368     271  CATGTATTACTGTGCGAGACATCGTCCGTATGACTGGAACTACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  97.9% (283/289)  IGHV5-10-1*01  276  ...................----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                       
D  93.8% (15/16)    IGHD1-7*01     2    ---------------------------....A...........----------------------------------------------  17
J  100.0% (44/44)   IGHJ4*02       5    ---------------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_164877

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ5*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AG	AGCGGCAGCTGGT	GTCGCGTTTTTCG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGAGCGGCAGCTGGTGTCGCGTTTTTCGACAACTGGTTCGACCCC	ARRAAAGVAFFDNWFDP	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2369   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  92.6% (225/243)  IGHV4-59*01  49   ........................................G.AG..........................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  N 
                    Query_2369   91   TGGATTGGATATATCTATTACAGTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGCCACCATTTCAGTTGACACGTCCAAGAAC  180
V  92.6% (225/243)  IGHV4-59*01  139  ........G....................C...............................T......A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  L  Y  F  C  A  R  R  A  A  A  G  V  A  F  F 
                    Query_2369   181  CAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCAGCGGATACGGCCTTATATTTCTGTGCGAGAAGAGCGGCAGCTGGTGTCGCGTTTTTC  270
V  92.6% (225/243)  IGHV4-59*01  229  .............A.....GC...........T.....C......G.G....A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.3% (12/13)    IGHD6-13*01  7    -----------------------------------------------------------------...A.........------------  19

                                      ----------------->                                  
                                       D  N  W  F  D  P  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_2369   271  GACAACTGGTTCGACCCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  322
J  98.0% (50/51)    IGHJ5*02     1    -..............................C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_317852

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           417     6e-119
IGHJ3*01                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	N/A	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GGATGCATCTCTTGGCCACACG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGATGCATCTCTTGGCCACACGTGCTTTTGATGTC	ARGMHLLATRAFDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  E  A  S  G  Y  T  F  T  S  Y 
                    Query_2370   2    CAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCGAGGCTTCTGGTTACACCTTTACCAGCTAC  91
V  96.2% (278/289)  IGHV1-18*04  7    ...................C........................................A.............................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  D  F  A  Q 
                    Query_2370   92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGGAACACAGACTTTGCACAG  181
V  96.2% (278/289)  IGHV1-18*04  97   .G.....................................................................T......A...A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  V  H  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_2370   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGTCCACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.2% (278/289)  IGHV1-18*04  187  ...C.............................................C.T......................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  F  A  R  G  M  H  L  L  A  T  R  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2370   272  GTGTATTATTTTGCGAGAGGGATGCATCTCTTGGCCACACGTGCTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTGTCTTCAG  359
V  96.2% (278/289)  IGHV1-18*04  277  ........C.G........---------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                       
J  97.9% (46/47)    IGHJ3*01     4    -----------------------------------------.......................................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_217340

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            349     2e-98
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAA	G	AGCAATGGCTGGT	TTTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGAGCAATGGCTGGTTTTATGATGCTTTTGATATC	AKSNGWFYDAFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2371   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGACGACTATGCCTTGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  95.1% (235/247)  IGHV3-9*01   47   ...........................................T..T......A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  D  T  I  G  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2371   91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGACACCATAGGCTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.1% (235/247)  IGHV3-9*01   137  ..............................GT.G...........C............................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  S  L  Q  M  N  S  L  I  P  E  D  T  A  L  Y  Y  C  A  K  S  N  G  W  F  Y  D  
                    Query_2371   181  AGAATTCCCTGTCTCTGCAAATGAACAGCCTGATACCTGAGGACACGGCCTTGTATTACTGTGCAAAGAGCAATGGCTGGTTTTATGATG  270
V  95.1% (235/247)  IGHV3-9*01   227  ....C.......A...............T....G.G...............................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  92.3% (12/13)    IGHD6-19*01  7    --------------------------------------------------------------------....G........---------  19
J  100.0% (50/50)   IGHJ3*02     1    -------------------------------------------------------------------------------------.....  5

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2371   271  CTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  315
J  100.0% (50/50)   IGHJ3*02     6    .............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_110637

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           300     9e-84
IGHD2-8*01                                                                                            14.1    8.8  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGGAGGGGGCTGCGGGAA	TGTACTA	TAACGGACGGCGGGGAATC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGGAGGGGGCTGCGGGAATGTACTATAACGGACGGCGGGGAATCATGGACGTC	ARLEGAAGMYYNGRRGIMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	220	28	0	88.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  R  N  T  D  F  W  V  W  I  R  Q  P  P  G  K  G 
                    Query_2372   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGGAATACTGACTTCTGGGTCTGGATCCGGCAGCCCCCCGGGAAGGGG  90
V  88.7% (220/248)  IGHV4-39*01  49   .........................................C..T.G..G.T...A.....G.........C........A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  A  I  H  Y  T  G  S  T  Y  Y  N  S  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2372   91   CTGGAGTGGATTGGGGCGATCCATTATACTGGGAGCACCTATTACAACTCGTCCCTCAAGAGTCGAGTCACCATCTCCGTGGACACGTCC  180
V  88.7% (220/248)  IGHV4-39*01  139  ...............AGT...T......G............C......C.........................A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       R  N  Q  F  S  L  N  L  R  S  V  T  A  T  D  T  S  V  F  Y  C  A  R  L  E  G  A  A  G  M 
                    Query_2372   181  AGGAACCAGTTCTCCCTGAACCTAAGGTCTGTGACCGCCACGGACACGTCTGTTTTCTACTGTGCGAGGCTGGAGGGGGCTGCGGGAATG  270
V  88.7% (220/248)  IGHV4-39*01  229  .A..................G..G..C............G.A......G....G.AT...........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD2-8*01   8    ----------------------------------------------------------------------------------------..  9

                                      DR3-IMGT------------------------>                                 
                                       Y  Y  N  G  R  R  G  I  M  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_2372   271  TACTATAACGGACGGCGGGGAATCATGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  336
D  100.0% (7/7)     IGHD2-8*01   10   .....-------------------------------------------------------------  14
J  97.6% (41/42)    IGHJ6*02     21   ------------------------........................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_8070

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            277     8e-77
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GAATGAACCCTGAATT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATGAACCCTGAATTC	ARGMNPEF	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	41	10	0	80.4
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	213	36	0	85.5


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  I  F  R  G  H  W  M  T  W  I  R  H  L  P  D  K  G  L  
                    Query_2373  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTCGTGGCCACTGGATGACCTGGATTCGCCACCTTCCAGATAAGGGGCTGC  90
V  85.5% (213/249)  IGHV3-7*01  47   ....................................C....A..A..T.T.......G....G.C.....GGC.....GG.........G  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     Q  W  V  A  N  I  N  E  D  G  S  E  E  H  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2373  91   AGTGGGTGGCCAATATAAACGAAGATGGAAGTGAAGAGCACTATGGTGACTCTGTGAAGGGCCGATTCACCATCTCCCGAGACAACGCCC  180
V  85.5% (213/249)  IGHV3-7*01  137  .............C.....GC.............GA.AT......TG..............................A...........A  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                     Q  N  S  L  V  L  Q  M  N  N  L  R  V  E  D  T  S  V  Y  Y  C  A  R  G  M  N  P  E  F  W  
                    Query_2373  181  AGAACTCTCTCGTTTTGCAAATGAACAACCTGAGAGTCGAAGACACTTCTGTATATTACTGTGCGAGAGGAATGAACCCTGAATTCTGGG  270
V  85.5% (213/249)  IGHV3-7*01  227  .......A..GTA.C............G........C...G.....GG....G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  94.3% (33/35)    IGHJ4*02    14   -------------------------------------------------------------------------------------.....  18

                                                                   
                                     G  Q  G  T  L  V  I  V  S  S  
                    Query_2373  271  GCCAGGGAACCCTGGTCATCGTCTCGTCAG  300
J  94.3% (33/35)    IGHJ4*02    19   ..................C......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_8071

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD2-2*02                                                                                            18.0    0.63 
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCAAGCAGTCGGGATTGTCAATTTAATGC	CTGCTATAC	GGAAACAGATCTTTGCCTCAATTC	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCAAGCAGTCGGGATTGTCAATTTAATGCCTGCTATACGGAAACAGATCTTTGCCTCAATTCCGGTTTGGGCGTC	ASSSRDCQFNACYTETDLCLNSGLGV	238	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	222	18	0	92.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  T  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_2374   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGGACTTACTACTGGAGCTGGATCCGGCAGTCACCAGGGAAGGGACTGGAG  90
V  92.5% (222/240)  IGHV4-59*01  49   ...............................G.........T.G.........................C.C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  D  I  N  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_2374   91   TGGATTGGGGATATCAATCACAGTGGGAACACCAACTACAACCCCTCCCTCAAGAGCCGAGTCACCATATCGGCAGACACGTCCAAGAAT  180
V  92.5% (222/240)  IGHV4-59*01  139  .........T.....T..T.........G...........................T..............A.T...............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       H  F  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  S  S  R  D  C  Q  F  N  A 
                    Query_2374   181  CACTTCTCCCTGAAGGTGACCTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGCGTCAAGCAGTCGGGATTGTCAATTTAATGCC  270
V  92.5% (222/240)  IGHV4-59*01  229  ..G............C...G...........................G..T.........------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD2-2*02   22   -----------------------------------------------------------------------------------------.  22

                                      --CDR3-IMGT--------------------------------->                                
                                       C  Y  T  E  T  D  L  C  L  N  S  G  L  G  V  W  G  Q  G  T  T  V  S  V  S  S
                    Query_2374   271  TGCTATACGGAAACAGATCTTTGCCTCAATTCCGGTTTGGGCGTCTGGGGCCAAGGGACCACCGTCTCCGTCTCCTC  347
D  100.0% (9/9)     IGHD2-2*02   23   ........---------------------------------------------------------------------  30
J  91.1% (41/45)    IGHJ6*02     17   --------------------------------....A...A.....................G...A..........  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_8072

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           285     4e-79
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACTTTGACTTC	ARVSTSAYYFDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	213	31	0	87.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  P  I  S  G  Y  Q  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_2375   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGACAACCCCCAGGAAAGGGACTGGAG  90
V  87.3% (213/244)  IGHV4-59*01  49   ...............................G.T........A.....T.C.........A....G..G........G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  S  F  D  T  S  K  R 
                    Query_2375   91   TGGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGTCCTTTGACACGTCCAAGAGG  180
V  87.3% (213/244)  IGHV4-59*01  139  .......GGT....C...........G.G..C...C................A..G............A..AG.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  Y  Y  F  D 
                    Query_2375   181  CAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATACTACTTTGAC  270
V  87.3% (213/244)  IGHV4-59*01  229  .............A....AGC..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-2*01   17   ---------------------------------------------------------------------......---------------  22
J  91.3% (42/46)    IGHJ4*02     1    -------------------------------------------------------------------------------...........  11

                                      -->                                
                                       F  W  G  R  G  T  L  V  V  V  S  S
                    Query_2375   271  TTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  305
J  91.3% (42/46)    IGHJ4*02     12   .A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_8073

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     9e-121
IGHD2-8*02                                                                                            14.1    9.9   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GTGAGGATTTCTTTGATG	CTGGTGG	GTCCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGAGGATTTCTTTGATGCTGGTGGGTCCCACTACTACGGCTTGGACGTC	ARREDFFDAGGSHYYGLDV	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	71	0	0	100
CDR1-IMGT	79	102	24	18	6	0	75
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	111	3	0	97.4
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	291	281	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  N  F  A  A  
                    Query_2376   8    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAACTTTGCCGCCC  97
V  96.6% (281/291)  IGHV5-51*01  5    ..............................................................................G....A..AG.T  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      L  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  
                    Query_2376   98   TCTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCCGGTGACTCTGATACCAGATACAGCC  187
V  96.6% (281/291)  IGHV5-51*01  95   A...............................................................T.........................  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  A  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  R  A  S  D  T  
                    Query_2376   188  CGTCCTTCCAAGGCCAGGTCGCCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACACCG  277
V  96.6% (281/291)  IGHV5-51*01  185  ....................A....C.................................................A..............  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------------CDR3-IMGT----------------------->                   
                                      A  M  Y  Y  C  A  R  R  E  D  F  F  D  A  G  G  S  H  Y  Y  G  L  D  V  W  G  Q  G  T  T  
                    Query_2376   278  CCATGTATTACTGTGCGAGACGTGAGGATTTCTTTGATGCTGGTGGGTCCCACTACTACGGCTTGGACGTCTGGGGCCAAGGGACCACGG  367
V  96.6% (281/291)  IGHV5-51*01  275  .....................---------------------------------------------------------------------  295
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD2-8*02   12   ---------------------------------------.......--------------------------------------------  18
J  94.3% (50/53)    IGHJ6*02     10   ---------------------------------------------------..........TA...........................  48

                                                    
                                      V  T  V  S  S 
                    Query_2376   368  TCACCGTCTCTTCA  381
J  94.3% (50/53)    IGHJ6*02     49   ..........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_8074

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            442     2e-126
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	287	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_2377   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  98.6% (287/291)  IGHV1-2*04   6    ..................G.............AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_2377   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.6% (287/291)  IGHV1-2*04   96   ..........................................................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_2377   181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  98.6% (287/291)  IGHV1-2*04   186  ..........................................................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W  G  Q
                    Query_2377   271  CGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGGGGCCA  360
V  98.6% (287/291)  IGHV1-2*04   276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------------------....A...........................  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_2377   361  AGGGACCACGGTCACCGTCTCCTCA  385
J  98.2% (56/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_8075

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           413     2e-117
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	290	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	294	5	5	0	0	100
Total	N/A	N/A	292	278	14	0	95.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  
                    Query_2378   3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCA  92
V  95.2% (278/292)  IGHV5-51*01  2    .................................................................A...G............C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  H  W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  
                    Query_2378   93   CCCACTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACA  182
V  95.2% (278/292)  IGHV5-51*01  92   G.T......................G.T..........................G..............G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  
                    Query_2378   183  GCCCGTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACA  272
V  95.2% (278/292)  IGHV5-51*01  182  ...................G.........................T.........................A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------CDR3-IMGT--------->                                 
                                      T  A  I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2378   273  CCGCCATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  352
V  95.2% (278/292)  IGHV5-51*01  272  .......G..T...........----------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ----------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_8076

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*02                                                                                            406     1e-115
IGHD2-2*01                                                                                            14.1    8.8   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*02	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAC	CAAAAT	TACCAGC	CAGGGTACGCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACCAAAATTACCAGCCAGGGTACGCTTACTTTGACTAC	AHQNYQPGYAYFDY	263	304	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	112	2	0	98.2
CDR3-IMGT (germline)	263	268	6	6	0	0	100
Total	N/A	N/A	268	264	4	0	98.5


Alignments

                                     <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  R  G  L  G  V  G  W  I  R
                    Query_2379  1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTCGTGGACTGGGTGTGGGCTGGATCCG  90
V  98.5% (264/268)  IGHV2-5*02  30   ................................................................A.....G...................  119
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                     -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  S  T
                    Query_2379  91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGTCCAC  180
V  98.5% (264/268)  IGHV2-5*02  120  .....................................................................................CT...  209
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                     ---------------------FR3-IMGT----------------------------------------------------><-------
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  Q
                    Query_2379  181  CATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACCA  270
V  98.5% (264/268)  IGHV2-5*02  210  ........................................................................................--  297
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                     ---------CDR3-IMGT--------------->                                  
                                       N  Y  Q  P  G  Y  A  Y  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_2379  271  AAATTACCAGCCAGGGTACGCTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  338
D  100.0% (7/7)     IGHD2-2*01  16   ----.......---------------------------------------------------------  22
J  97.8% (45/46)    IGHJ4*02    3    ----------------------.................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_8077

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           403     1e-114
IGHD2-2*01                                                                                            19.9    0.17  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGGGA	AGTACCAGCT	CCTCAACCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGGAAGTACCAGCTCCTCAACCCTGACTAC	ARGGKYQLLNPDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N  N  Y
                    Query_2380   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACGTTCAACAACTA  90
V  94.5% (274/290)  IGHV1-69*01  6    ..................G...........................................................C....G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  T  V  F  G  T  T  N  Y  A  Q
                    Query_2380   91   TGCTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCATCATCACTGTCTTTGGAACAACAAACTACGCACA  180
V  94.5% (274/290)  IGHV1-69*01  96   .........C............................................G......C..A.......T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_2380   181  GAAGTTCCAGGGCAGAGTCACCATTACCGCGGACGAATCGACGAGGACAGCCTACATGGAGCTGAGTAGCCTAAGATCTGAGGACACGGC  270
V  94.5% (274/290)  IGHV1-69*01  186  .....................G.................C.....C....................C.....G.................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  G  G  K  Y  Q  L  L  N  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2380   271  CGTTTATTACTGTGCGAGAGGCGGGAAGTACCAGCTCCTCAACCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  94.5% (274/290)  IGHV1-69*01  276  ...G................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD2-2*01   14   --------------------------..........--------------------------------------------------  23
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_33444

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           392     2e-111
IGHD1-26*01                                                                                           10.3    135   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCTA	GGAGC	AAACGGACTTTAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCTAGGAGCAAACGGACTTTATTACTTTGACTTC	ARLLGANGLYYFDF	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  E  A  S  G  D  T  F  T  R  Y
                    Query_2381   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCGAGGCATCTGGAGACACCTTCACCAGGTA  90
V  93.4% (270/289)  IGHV1-46*01  6    .............................................................A...........T.............C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  L  Y  W  V  R  Q  A  P  G  Q  G  F  E  W  L  G  V  I  N  P  S  S  G  S  T  S  Y  A  Q
                    Query_2381   91   CTTTCTGTACTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGTGGTTGGGAGTAATAAACCCCAGTAGTGGTAGCACAAGTTACGCACA  180
V  93.4% (270/289)  IGHV1-46*01  96   ..A.A..C.............................C........A.....A....C.....T...G.............C........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        Q  F  Q  G  R  V  T  M  T  R  D  T  S  T  M  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_2381   181  GCAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGATGACAGTGTACATGGAACTGAGCAGCCTAAGATCTGAGGACACGGC  270
V  93.4% (270/289)  IGHV1-46*01  186  .A..........................................GC.....C........G...........G.................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  L  L  G  A  N  G  L  Y  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2381   271  CGTGTATTACTGTGCGAGACTTCTAGGAGCAAACGGACTTTATTACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.4% (270/289)  IGHV1-46*01  276  ...................----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                       
D  100.0% (5/5)     IGHD1-26*01  10   -------------------------.....-----------------------------------------------------------  14
J  97.8% (45/46)    IGHJ4*02     3    -------------------------------------------..........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_91743

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           341     5e-96
IGHD2-2*02                                                                                            12.2    32   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCA	CTGGTATAC	TTACGTCAGCGGGGGATATG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTGGTATACTTACGTCAGCGGGGGATATGTTGACTAC	ARGHWYTYVSGGYVDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2382   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGTAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (231/244)  IGHV4-59*01  49   ..................A...........................A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  F  T  G  N  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  D 
                    Query_2382   91   TGGATTGGATATATTTATTTCACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGCCACCATATCAGTAGACACGTCCAAGGAC  180
V  94.7% (231/244)  IGHV4-59*01  139  ........G.....C....A..G.....G................................T.........................A..  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  W  Y  T  Y  V  S  G 
                    Query_2382   181  CAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCAGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCACTGGTATACTTACGTCAGCGGG  270
V  94.7% (231/244)  IGHV4-59*01  229  .............A......C...........T..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (8/9)      IGHD2-2*02   22   --------------------------------------------------------------------...C.....-------------  30

                                      -------------->                                  
                                       G  Y  V  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_2382   271  GGATATGTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  319
J  97.6% (41/42)    IGHJ4*02     7    -------.............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_33446

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           344     6e-97
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	C	TATAGCAGTGGCTGG	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGACTATAGCAGTGGCTGGTACTTTGACTAC	ARDYSSGWYFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2383   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTACTTTCAGTAGCTACTGGATACACTGGGTCCGCCAAGCTCCAGGAAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-74*01  47   ..................................C..C.................G.......................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  I  T  R  D  E  I  G  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2383   91   AGTGGGTCTCACGTATTACTAGAGATGAGATTGGCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-74*01  137  T.................A...T....G..G.A......G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  S  S  G  W  Y  
                    Query_2383   181  AGAATACGGTGTATCTGCAAATGAACAGTCTCAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGGGACTATAGCAGTGGCTGGTACT  270
V  94.0% (235/250)  IGHV3-74*01  227  ....C...C......................G...................................A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD6-19*01  4    -----------------------------------------------------------------------...............----  18
J  97.8% (45/46)    IGHJ4*02     3    --------------------------------------------------------------------------------------....  6

                                      ------->                                  
                                      F  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2383   271  TTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.8% (45/46)    IGHJ4*02     7    ...............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_33447

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           349     3e-98
IGHD2-15*01                                                                                           10.3    139  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	CTATCTTTTGCGACTA	GATAT	GTGTCTGGCCTCGAAGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCAGACTATCTTTTGCGACTAGATATGTGTCTGGCCTCGAAGCCTTTGACTCC	SRLSFATRYVSGLEAFDS	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	289	6	4	2	0	66.7
Total	N/A	N/A	289	256	33	0	88.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  S  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  C  T  F  S  G  H
                    Query_2384   1    GCAGCTGGTGCAGTCTGGATCAGAGGTGAAAAAGCCGGGGGAGTCTCTCAAGATCTCCTGCCAGGCTTCTGGATGCACCTTTAGCGGTCA  90
V  88.6% (256/289)  IGHV5-51*03  6    ...................G............................G...........TA...G........A..G.....C.A.CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  V  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  N  T  K  Y  N  P
                    Query_2384   91   CTGGGTCGGCTGGGTGCGCCAGAGGCCCGGGAAAGGCCTGGAGTGGATGGGAGTCATCTATCCTGGTGACTCTAATACCAAATACAACCC  180
V  88.6% (256/289)  IGHV5-51*03  96   ....A..................T...........................GA....................G......G.....G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  R  V  T  L  S  A  D  K  S  I  N  T  V  F  L  Q  W  T  S  L  E  A  S  D  T  A
                    Query_2384   181  GTCCTTCCAAGGCCGAGTCACCCTCTCAGCCGACAAGTCCATCAACACTGTCTTCCTGCAGTGGACCAGCCTGGAGGCCTCGGACACCGC  270
V  88.6% (256/289)  IGHV5-51*03  186  ..............AG......A.....................G...C.C..A...........G.......A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  F  C  S  R  L  S  F  A  T  R  Y  V  S  G  L  E  A  F  D  S  W  G  Q  G  T  L  V  T
                    Query_2384   271  CGTCTACTTCTGTTCCAGACTATCTTTTGCGACTAGATATGTGTCTGGCCTCGAAGCCTTTGACTCCTGGGGCCAGGGAACCCTGGTCAC  360
V  88.6% (256/289)  IGHV5-51*03  276  .A.G..T.A....G.G...-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD2-15*01  3    -----------------------------------.....--------------------------------------------------  7
J  97.7% (43/44)    IGHJ4*02     5    ---------------------------------------------------------........A........................  37

                                                 
                                        V  S  S  
                    Query_2384   361  CGTCTCCTCAG  371
J  97.7% (43/44)    IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_33440

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           346     2e-97
IGHD3-16*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCT	TTACGTTTGGGGGAGCTATG	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTTTACGTTTGGGGGAGCTATGGACTACTTTGACTAC	ARGLFTFGGAMDYFDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  V  A  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_2385   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGTCGCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  94.4% (235/249)  IGHV4-31*02  50   .....TCC...A..................G.T..........................................A..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  R  G  S  T  Y  S  N  P  S  L  M  S  R  V  T  I  S  V  D  T  S  
                    Query_2385   94   TGGAGTGGATTGGGTACATCTATTACCGTGGGAGCACGTACTCCAACCCGTCCCTCATGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  94.4% (235/249)  IGHV4-31*02  140  ..........................A..........C....A..............A................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  L  S  V  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  F  T  F  G  G  
                    Query_2385   184  AGAACCAGTTGTCCGTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTATTGTGCGAGAGGCCTCTTTACGTTTGGGGGAG  273
V  94.4% (235/249)  IGHV4-31*02  230  ..........C...C...........................................C..........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  95.0% (19/20)    IGHD3-16*01  10   ---------------------------------------------------------------------------...............  24

                                      T------------------>                                  
                                      A  M  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2385   274  CTATGGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.0% (19/20)    IGHD3-16*01  25   T....-------------------------------------------------  29
J  100.0% (48/48)   IGHJ4*02     1    ------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_33441

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	TACTATAATCCTAGTGGTTATTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACTATAATCCTAGTGGTTATTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGYYGYWYFDL	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E  
                    Query_2386   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  95.9% (234/244)  IGHV4-59*01  50   .....TCC...A...............................................A..............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  I  S  K  N  
                    Query_2386   94   GGATTGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGATATCTCCAAGAACC  183
V  95.9% (234/244)  IGHV4-59*01  140  .......G....................................................................C.CG..........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  Y  Y  
                    Query_2386   184  AGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACTACTATAATCCTAGTGGTTATTACG  273
V  95.9% (234/244)  IGHV4-59*01  230  ..................G.............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  87.5% (21/24)    IGHD3-22*01  5    -----------------------------------------------------------------......G..AG.............-  28

                                      ------------------->                                  
                                      G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2386   274  GGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  327
J  100.0% (52/52)   IGHJ2*01     2    --....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_33442

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           258     4e-71
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ3*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGCCCCATT	TTACTATGATAGTCGTGGTT	TTCACCA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGCCCCATTTTACTATGATAGTCGTGGTTTTCACCATGATGTCTTTGATCTG	ARRAPFYYDSRGFHHDVFDL	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	99	15	0	86.8
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	204	39	0	84


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  L  S  G  G  P  I  T  G  S  Y  W  N  W  F  R  Q  S  P  G  M  G  L  E  
                    Query_2387   4    CCCTGAGACTCTCCTGTACTCTCTCTGGTGGCCCCATTACTGGCTCCTACTGGAACTGGTTCCGGCAGTCCCCAGGTATGGGACTGGAGT  93
V  84.0% (204/243)  IGHV4-59*08  50   .....TCC...A....C...G...........T....C.G.A.T.A........G....A........C.......G.A...........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  V  Y  Y  T  G  A  T  Y  Y  N  P  S  F  K  S  R  V  T  I  S  V  D  T  S  K  T  
                    Query_2387   94   GGATTGGCTATGTCTACTACACTGGGGCCACCTACTACAACCCCTCGTTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGACGC  183
V  84.0% (204/243)  IGHV4-59*08  140  .......G...A....T....G....AG....A.............CC...................A.....A.............AC.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      Q  F  T  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  R  A  P  F  Y  Y  D  S  R  
                    Query_2387   184  AGTTTACCCTGAACTTGAGTTCTGTCACCGCCGCAGACACGGCCGTCTATTTCTGTGCCAGACGGGCCCCATTTTACTATGATAGTCGTG  273
V  84.0% (204/243)  IGHV4-59*08  230  ....CT.......GC....C.....G....................G....A......G....---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  95.0% (19/20)    IGHD3-22*01  4    -------------------------------------------------------------------------.............A...  20

                                      T------------------------>                                  
                                      G  F  H  H  D  V  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2387   274  GTTTTCACCATGATGTCTTTGATCTGTGGGGCCAAGGGACATTGGTCACCGTCTCTTCAG  333
D  95.0% (19/20)    IGHD3-22*01  21   ...---------------------------------------------------------  23
J  90.0% (45/50)    IGHJ3*01     1    ----------.....CT......G.C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_33443

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            276     3e-76
IGHD3-10*01                                                                                           12.2    32   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	96	18	0	84.2
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	211	35	0	85.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_2388   1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  85.8% (211/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  S  M  S  V  D  K  S  K 
                    Query_2388   91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCAGCATGTCAGTAGACAAGTCCAAG  180
V  85.8% (211/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A............C...A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  N  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_2388   181  AATCAATTCTCCCTCACGCTGACGTCTCTGAACGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  85.8% (211/246)  IGHV4-4*01   229  ..C..G........G.A.....GC...G...C..................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_2388   271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_33448

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            371     7e-105
IGHD2-2*01                                                                                            12.2    34    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATC	TAGTAACACCTG	GCACTCGGGGTTTTGGT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTAGTAACACCTGGCACTCGGGGTTTTGGTTAC	AGHLVTPGTRGFGY	264	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	77	27	25	2	0	92.6
FR2-IMGT	78	128	51	49	2	0	96.1
CDR2-IMGT	129	149	21	18	3	0	85.7
FR3-IMGT	150	263	114	108	6	0	94.7
CDR3-IMGT (germline)	264	269	6	5	1	0	83.3
Total	N/A	N/A	269	253	16	0	94.1


Alignments

                                     <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                        G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  S  G  G  S  I  T  S  S  N  W  W  S  W  V  
                    Query_2389  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCAGCAGTAACTGGTGGAGTTGGGTCC  90
V  94.1% (253/269)  IGHV4-4*02  26   ................T....G.........................................G...T......................  115
                                        G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                     --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                     R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  G  G  N  T  N  Y  N  P  S  L  E  S  R  V  
                    Query_2389  91   GCCAGCCCCCCGGGAAGGGTCTGGAGTGGATTGGGGAAATCTATCATGGTGGAAACACCAACTACAACCCGTCCCTCGAGAGTCGAGTCA  180
V  94.1% (253/269)  IGHV4-4*02  116  ..........A........G...........................A....G.G......................A............  205
                                     R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                     ----------------------FR3-IMGT----------------------------------------------------><------
                                     T  I  S  V  D  K  S  N  N  Q  F  S  L  R  L  N  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  
                    Query_2389  181  CCATATCAGTAGACAAGTCCAACAACCAGTTCTCCCTGAGGCTGAACTCTCTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGGGAC  270
V  94.1% (253/269)  IGHV4-4*02  206  ......................G................A.....G....G...........................A.......A..-  294
                                     T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  

                                     ----------CDR3-IMGT--------------->                                  
                                     H  L  V  T  P  G  T  R  G  F  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2389  271  ATCTAGTAACACCTGGCACTCGGGGTTTTGGTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  83.3% (10/12)    IGHD2-2*01  13   ---.....C..G...------------------------------------------------------  24
J  100.0% (37/37)   IGHJ4*02    12   --------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_33449

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD1-26*01                                                                                           27.6    9e-04 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  N  Y
                    Query_2390   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAATTA  90
V  94.8% (276/291)  IGHV5-51*01  6    .................................................................G....................GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  A  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  H  P  G  D  S  D  T  R  Y  S  P
                    Query_2390   91   CTGGATCGGCTGGGCGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATGCATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ..............T..........................................CT...............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  R  A  S  D  T  A
                    Query_2390   181  GTCTTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTATTTGCAGTGGAGGAGCCTGAGGGCCTCGGACACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  ...C...C..............................................CC..........C.......A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  F  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  P  G  T  A  V
                    Query_2390   271  CATATACTTCTGTGCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTCTGGGGCCCGGGGACCGCGGT  360
V  94.8% (276/291)  IGHV5-51*01  276  ...G..T.A............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (14/14)   IGHD1-26*01  4    -----------------------------..............-----------------------------------------------  17
J  91.2% (52/57)    IGHJ6*02     6    ----------------------------------------------.......A......T................AA......A....  49

                                                   
                                        T  V  S  S 
                    Query_2390   361  CACCGTCTCCTCA  373
J  91.2% (52/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_164872

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           254     1e-69
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCCCCCTCCTGTG	GGTGACTAC	GTCAGCGGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCCCCCTCCTGTGGGTGACTACGTCAGCGGCCTTGACTAT	AKPPPVGDYVSGLDY	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	18	8	0	69.2
CDR1-IMGT	28	51	24	12	12	0	50
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	126	24	21	3	0	87.5
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	244	203	41	0	83.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  T  V  S  G  D  S  F  T  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_2391   2    CCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCTTTACTTCTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  91
V  83.2% (203/244)  IGHV3-30*18  50   .....AGA...T....TG.A.C......ATT.A....C.G.AGC..TGG.AT.CA....G....C...G.T.....C.....G.......  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  A  V  I  S  Y  D  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_2391   92   GGGTGGCAGTCATTTCATATGATGGAAGTAATACGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGGGACAATTCCAAGA  181
V  83.2% (203/244)  IGHV3-30*18  140  ..........T..A...................AA.........................................A.............  229
                                      W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------CDR3-IMGT----
                                      N  T  L  S  L  Q  M  S  S  L  R  P  E  D  S  G  V  Y  Y  C  A  K  P  P  P  V  G  D  Y  V  
                    Query_2391   182  ACACCCTGTCTCTGCAAATGAGCAGCCTGAGACCTGAGGACTCGGGTGTGTATTACTGTGCGAAGCCCCCTCCTGTGGGTGACTACGTCA  271
V  83.2% (203/244)  IGHV3-30*18  230  ....G....A...........A..........G........A...C..................--------------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  100.0% (9/9)     IGHD4-17*01  8    -----------------------------------------------------------------------------.........----  16

                                      ------------->                                  
                                      S  G  L  D  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_2391   272  GCGGCCTTGACTATTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  319
J  95.2% (40/42)    IGHJ4*02     7    ------.......C................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_135930

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            361     4e-102
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	TTGGCAATTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGGCAATTCCTACGCTATGGACGTC	ARVGNSYAMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2392  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-7*01  47   .........................................................G................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  H  D  G  S  E  K  K  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2392  91   AATGGGTGGCCAACATAAAACACGATGGAAGTGAGAAAAAGTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (240/249)  IGHV3-7*01  137  .G.................G..A...............T.C.................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                     K  N  S  L  Y  L  Q  V  T  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  N  S  Y  A  M  
                    Query_2392  181  AGAACTCACTGTATCTGCAAGTGACCAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGTTGGCAATTCCTACGCTATGG  270
V  96.4% (240/249)  IGHV3-7*01  227  ....................A...A...........................G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  98.0% (48/49)    IGHJ6*02    14   -------------------------------------------------------------------------------.....G.....  24

                                     ---->                                 
                                     D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2392  271  ACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  308
J  98.0% (48/49)    IGHJ6*02    25   ......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_135931

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           360     1e-101
IGHD6-6*01                                                                                            16.1    2.3   
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	T	GAGTTTAGCACCTC	CGCGGAGTATGCGCGCCG	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTGAGTTTAGCACCTCCGCGGAGTATGCGCGCCGATTACTACAATAACTACGCTATGGACGTC	ARVSLAPPRSMRADYYNNYAMDV	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	237	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2393   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (237/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_2393   91   TGGATTGGGTATATTAATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAGC  180
V  97.1% (237/244)  IGHV4-59*01  139  ..............CT........................................................................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  V  S  L  A  P  P  R  S  M 
                    Query_2393   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTTCTGTGCGCGAGTGAGTTTAGCACCTCCGCGGAGTATG  270
V  97.1% (237/244)  IGHV4-59*01  229  ...............C...............................G....A.......A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  85.7% (12/14)    IGHD6-6*01   1    -----------------------------------------------------------------....A.....G...-----------  14

                                      3-IMGT----------------------------->                                 
                                       R  A  D  Y  Y  N  N  Y  A  M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_2393   271  CGCGCCGATTACTACAATAACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  339
J  91.9% (57/62)    IGHJ6*02     1    -------........T.CT......G................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_135932

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           366     2e-103
IGHD6-13*01                                                                                           18.0    0.59  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	N/A	GTATAGCAG	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGTATAGCAGCTTTGAGTAT	AREYSSFEY	261	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	23	1	0	95.8
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	18	3	0	85.7
FR3-IMGT	147	260	114	107	7	0	93.9
CDR3-IMGT (germline)	261	268	8	7	1	0	87.5
Total	N/A	N/A	268	251	17	0	93.7


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  
                    Query_2394   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGTACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGC  90
V  93.7% (251/268)  IGHV4-59*01  26   ................T.......................C.........................G.......................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  A  P  G  K  G  L  E  W  I  A  Y  I  H  Y  T  G  S  T  S  Y  N  P  S  L  R  S  R  A  T  
                    Query_2394   91   AGGCCCCCGGGAAGGGACTGGAGTGGATTGCGTATATTCATTACACTGGGAGCACCAGTTATAACCCCTCCCTCAGGAGTCGAGCCACCA  180
V  93.7% (251/268)  IGHV4-59*01  116  ..C....A......................G......CT......G...........AC..C.............A........T.....  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><--------C
                                      I  S  V  D  T  S  K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  E  
                    Query_2394   181  TATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGGGAGT  270
V  93.7% (251/268)  IGHV4-59*01  206  ....................................A......................................A.........A..--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     
D  100.0% (9/9)     IGHD6-13*01  3    ----------------------------------------------------------------------------------------..  4

                                      DR3-IMGT-------->                                  
                                      Y  S  S  F  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2394   271  ATAGCAGCTTTGAGTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (9/9)     IGHD6-13*01  5    .......--------------------------------------------  11
J  95.5% (42/44)    IGHJ4*02     5    -------......C..C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_325017

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           315     5e-88
IGHD2-15*01                                                                                           10.3    118  
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	CCCGCGTTGC	GGTAG	A	TGATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGCCCGCGTTGCGGTAGATGATTCTTTTGATCTC	ARARVAVDDSFDL	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	225	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  S  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2395   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACTAGTCACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  90.4% (225/249)  IGHV3-74*01  47   ..........................................G...CT..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  N  D  G  S  L  T  H  Y  A  D  S  V  R  G  R  V  T  F  S  R  D  N  T  
                    Query_2395   91   TGTGGGTCTCACGTATTAATAATGATGGGAGTCTCACACACTATGCGGACTCCGTCAGGGGCCGAGTCACCTTCTCCAGAGACAACACCA  180
V  90.4% (225/249)  IGHV3-74*01  137  .....................G..........AG....AG...C...........G.A.......T.....A..............G...  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  R  T  L  Y  L  Q  M  T  S  L  R  A  D  D  T  A  V  Y  F  C  A  R  A  R  V  A  V  D  D  
                    Query_2395   181  AGAGAACACTGTATCTGCAGATGACCAGTCTGAGAGCCGACGATACGGCTGTCTATTTCTGTGCCAGAGCCCGCGTTGCGGTAGATGATT  270
V  90.4% (225/249)  IGHV3-74*01  227  ...AC..G...........A....A...............G..C........G....A......A....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-15*01  17   -------------------------------------------------------------------------------.....------  21
J  92.0% (46/50)    IGHJ3*01     1    -------------------------------------------------------------------------------------....G  5

                                      ---------->                                  
                                      S  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2395   271  CTTTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCCTCAG  315
J  92.0% (46/50)    IGHJ3*01     6    ........G.................A.............T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_135934

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            392     2e-111
IGHD7-27*01                                                                                           10.3    123   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	AGAGGGC	CTGGG	TTGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGAAGAGGGCCTGGGTTGGTTGACTAC	AHRRGPGLVDY	263	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	27	3	0	90
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	112	2	0	98.2
CDR3-IMGT (germline)	263	271	9	9	0	0	100
Total	N/A	N/A	271	261	10	0	96.3


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  T  T  G  G  V  A  V  A  W  I  R
                    Query_2396   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCACCACTGGTGGAGTGGCTGTGGCCTGGATCCG  90
V  96.3% (261/271)  IGHV2-5*01   30   ...........................................................G....A.........G.....G.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  D  W  L  A  L  I  D  G  N  D  D  K  R  F  S  P  S  L  K  S  R  L  T
                    Query_2396   91   TCAGCCCCCCGGAAAGGCCCTGGACTGGCTTGCACTCATTGATGGGAATGATGATAAGCGCTTCAGCCCATCTCTGAAGAGCAGGCTCAC  180
V  96.3% (261/271)  IGHV2-5*01   120  .........A..............G...............T..T..................A...........................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  H  C  A  H  R
                    Query_2396   181  CATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATCACTGTGCACACAG  270
V  96.3% (261/271)  IGHV2-5*01   210  ............................................................................T.............  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  R

                                      ----CDR3-IMGT----------->                                  
                                        R  G  P  G  L  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2396   271  AAGAGGGCCTGGGTTGGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  329
V  96.3% (261/271)  IGHV2-5*01   300  .----------------------------------------------------------  300
                                                                                                 
D  100.0% (5/5)     IGHD7-27*01  5    --------.....----------------------------------------------  9
J  100.0% (42/42)   IGHJ4*02     7    -----------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_110630

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           335     4e-94
IGHD6-19*01                                                                                           12.2    32   
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-19*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCTTG	GCACTGGCT	CCTCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATCGCTTGGCACTGGCTCCTCGTGCTTTCGATGTC	TRDRLALAPRAFDV	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	235	21	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  G  D  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2397   1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCAATTTTGGTGATTATGCTATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  91.8% (235/256)  IGHV3-49*04  47   ....................................CC...................G.....................G..........  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  L  G  F  I  R  T  T  A  Y  G  A  T  T  E  Y  A  A  S  V  E  D  R  L  T  I  S  R  D  
                    Query_2397   91   AGTGGTTAGGTTTCATAAGAACAACAGCTTATGGTGCGACAACAGAGTACGCCGCGTCTGTGGAGGACAGACTAACCATCTCAAGAGATG  180
V  91.8% (235/256)  IGHV3-49*04  137  .....G..........T....GC.A...........G.........A...............A.A.G....T.C................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  T  R  D  R  L  A  L  
                    Query_2397   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAGAGTGAAGACACAGCCGTGTATTATTGTACTAGAGATCGCTTGGCACTGG  270
V  91.8% (235/256)  IGHV3-49*04  227  ........................................A.CC..G.................C...........--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  88.9% (8/9)      IGHD6-19*01  8    -----------------------------------------------------------------------------------...G...  14

                                      IMGT--------------->                                  
                                      A  P  R  A  F  D  V  W  G  Q  G  T  M  V  T  V  P  S  
                    Query_2397   271  CTCCTCGTGCTTTCGATGTCTGGGGCCAAGGGACAATGGTCACCGTCCCTTCAG  324
D  88.9% (8/9)      IGHD6-19*01  15   ..----------------------------------------------------  16
J  95.7% (45/47)    IGHJ3*01     4    -------......T.................................T......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_135936

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHD5-12*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGCGGGA	TGGCTAC	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGACAGGTGCGGGATGGCTACCTGACTAC	VTGAGWLPDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	5	2	0	71.4
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  G  Y  Y  L  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2398   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTGGTTATTATTTGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*01  49   ......................................C...A....C..C.G..G.................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  L  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_2398   91   TGGCTTGGTTTGATCTCTTACAGCGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAACAAC  180
V  92.2% (225/244)  IGHV4-59*01  139  ...A....G.AT....A......T.....C........................................................G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  V  T  G  A  G  W  L  P  D  Y  W 
                    Query_2398   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCCTGTATTATTGTGTGACAGGTGCGGGATGGCTACCTGACTACTGG  270
V  92.2% (225/244)  IGHV4-59*01  229  .............................................G.......C....C..G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-12*01  11   ------------------------------------------------------------------------.......-----------  17
J  100.0% (41/41)   IGHJ4*02     8    --------------------------------------------------------------------------------..........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_2398   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (41/41)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_269691

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           400     9e-114
IGHD3-9*01                                                                                            31.5    6e-05 
IGHJ6*03                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-9*01	IGHJ6*03	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGAAA	TACGATATTTTGACTG	ACTCGTACGCAAGTACATAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGAAATACGATATTTTGACTGACTCGTACGCAAGTACATATTACTACTACTCCATGGACGTC	ARGKYDILTDSYASTYYYYSMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	272	16	0	94.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  M  K  V  S  C  K  A  S  G  D  T  F  N  F  F
                    Query_2399   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCCGGGTCCTCGATGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAACTTCTT  90
V  94.4% (272/288)  IGHV1-69*06  6    ..................G.................T.........G...........................G........G.AG..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  H  Y  A  Q
                    Query_2399   91   TGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGAACAACACACTACGCACA  180
V  94.4% (272/288)  IGHV1-69*06  96   ........G...............................................................T...G..A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  F  T  A  D  K  S  T  S  T  A  Y  M  D  L  S  S  L  R  S  E  D  A  A
                    Query_2399   181  GAAGTTCCAGGGCAGAGTCACATTTACCGCGGACAAATCCACGAGCACAGCCTACATGGACCTGAGCAGCCTGAGATCTGAGGACGCGGC  270
V  94.4% (272/288)  IGHV1-69*06  186  .....................GA.....................................G........................A....  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  Y  C  A  R  G  K  Y  D  I  L  T  D  S  Y  A  S  T  Y  Y  Y  Y  S  M  D  V  W  G  Q
                    Query_2399   271  CGTGTATTACTGTGCGAGGGGGAAATACGATATTTTGACTGACTCGTACGCAAGTACATATTACTACTACTCCATGGACGTCTGGGGCCA  360
V  94.4% (272/288)  IGHV1-69*06  276  ..................------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  100.0% (16/16)   IGHD3-9*01   5    -------------------------................-------------------------------------------------  20
J  94.4% (51/54)    IGHJ6*03     9    -------------------------------------------------------------..........A................A.  37

                                                               
                                        G  T  A  V  T  V  S  S 
                    Query_2399   361  AGGGACCGCGGTCACCGTCTCCTCA  385
J  94.4% (51/54)    IGHJ6*03     38   .......A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_269690

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           399     3e-113
IGHD4-17*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGGCCC	CTACGGTGACTAC	CCGTCAT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGCCCCTACGGTGACTACCCGTCATACTCCTTTGACTAC	AREGPYGDYPSYSFDY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  A  S  G  G  T  F  N  S  Y
                    Query_2400   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGGCTTCTGGAGGCACCTTCAACAGCTA  90
V  93.8% (273/291)  IGHV1-69*01  6    ..................G...........................................A....................G......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  S  W  M  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  I  T  N  Y  A  Q
                    Query_2400   91   TGTTATCAGTTGGATGCGACAGGCCCCTGGACAAGGGCTCGAGTGGATGGGCGGGATCATCCCTATCTTTGGTATAACAAACTACGCACA  180
V  93.8% (273/291)  IGHV1-69*01  96   ..C......C...G.........................T...........A......................C.G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  G  T  I  T  A  A  D  S  T  S  T  A  Y  M  E  L  S  S  L  K  S  A  D  T  A
                    Query_2400   181  GAAGTTCCAGGGCAGAGGCACGATTACCGCGGCCGACTCCACCAGCACAGCCTACATGGAGCTGAGCAGCCTGAAATCTGCGGACACGGC  270
V  93.8% (273/291)  IGHV1-69*01  186  .................T..............A...A.....G...............................G.....A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        L  Y  S  C  A  R  E  G  P  Y  G  D  Y  P  S  Y  S  F  D  Y  W  G  Q  G  T  L  V  S  V  S
                    Query_2400   271  CCTGTATTCCTGTGCGAGAGAAGGCCCCTACGGTGACTACCCGTCATACTCCTTTGACTACTGGGGCCAGGGAACCCTGGTTTCCGTCTC  360
V  93.8% (273/291)  IGHV1-69*01  276  .G......A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (13/13)   IGHD4-17*01  4    ---------------------------.............--------------------------------------------------  16
J  93.8% (45/48)    IGHJ4*02     1    -----------------------------------------------...A..............................CA.......  43

                                           
                                        S  
                    Query_2400   361  CTCAG  365
J  93.8% (45/48)    IGHJ4*02     44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_269693

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           422     2e-120
IGHD3-22*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCAT	TATGAAAGTAGTGGT	CATCTAGTATCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCATTATGAAAGTAGTGGTCATCTAGTATCTTACTTTGACTAC	ARLHYESSGHLVSYFDY	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	74	1	0	98.7
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	110	4	0	96.5
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	294	282	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  Q  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  A 
                    Query_2401   2    CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGCAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCGCC  91
V  95.9% (282/294)  IGHV1-46*01  1    .................................A.....................................................A..  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  Y  I  H  W  A  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  S  P  S  D  G  S  T  N  Y 
                    Query_2401   92   CGTTACTATATACACTGGGCGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAGCCCTAGTGATGGTAGCACAAACTAT  181
V  95.9% (282/294)  IGHV1-46*01  91   A.C........G.......T............................................A........G...........G...C  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  R  T  V  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_2401   182  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGGACAGTCTATATGGAGCTGAGCAGCCTGAGATCTGAGGAC  271
V  95.9% (282/294)  IGHV1-46*01  181  ..................................................C........C..............................  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------------CDR3-IMGT-------------------->                     
                                       T  A  V  Y  Y  C  A  R  L  H  Y  E  S  S  G  H  L  V  S  Y  F  D  Y  W  G  Q  G  T  L  V 
                    Query_2401   272  ACGGCCGTGTATTACTGTGCGAGACTTCATTATGAAAGTAGTGGTCATCTAGTATCTTACTTTGACTACTGGGGCCAGGGAACCCTGGTC  361
V  95.9% (282/294)  IGHV1-46*01  271  ........................------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  93.3% (14/15)    IGHD3-22*01  8    ------------------------------.....T.........---------------------------------------------  22
J  100.0% (46/46)   IGHJ4*02     3    ---------------------------------------------------------.................................  35

                                                   
                                       T  V  S  S  
                    Query_2401   362  ACCGTCTCCTCAG  374
J  100.0% (46/46)   IGHJ4*02     36   .............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_110631

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           385     4e-109
IGHD3-22*01                                                                                           18.0    0.67  
IGHJ3*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAAAGAAACA	TATTCCTATGACAGT	GGCAGTGGAC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAAAGAAACATATTCCTATGACAGTGGCAGTGGACCTTTTGATATC	ARGKETYSYDSGSGPFDI	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_2402   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCTCCAGTTA  90
V  92.4% (268/290)  IGHV1-69*06  6    ..................G...............................................................AG...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  V  P  M  F  P  T  A  D  S  P  E
                    Query_2402   91   TGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCGTACCTATGTTTCCAACAGCAGACTCCCCCGA  180
V  92.4% (268/290)  IGHV1-69*06  96   ........G.................................................A.C.....C...GGT......A...A.G.AC.  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  E  D  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_2402   181  GAAGTTCGAGGACAGAGTCACGATTACCGCGGACAAATCAACGAGCACAGCCTACATGGAACTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  92.4% (268/290)  IGHV1-69*06  186  .......C...G...........................C....................G.............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  G  K  E  T  Y  S  Y  D  S  G  S  G  P  F  D  I  W  G  Q  G  T  M  V  T
                    Query_2402   271  CATGTATTATTGTGCGAGAGGGAAAGAAACATATTCCTATGACAGTGGCAGTGGACCTTTTGATATCTGGGGCCAAGGGACAATGGTCAC  360
V  92.4% (268/290)  IGHV1-69*06  276  .G.......C..........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  86.7% (13/15)    IGHD3-22*01  2    -------------------------------....A......T...--------------------------------------------  16
J  100.0% (45/45)   IGHJ3*02     6    --------------------------------------------------------..................................  39

                                                 
                                        V  S  S  
                    Query_2402   361  CGTCTCTTCAG  371
J  100.0% (45/45)   IGHJ3*02     40   ...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_269695

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           427     9e-122
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_2403   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTA  90
V  97.2% (281/289)  IGHV5-51*03  6    ..............................................................................C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_2403   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  97.2% (281/289)  IGHV5-51*03  96   .......................................................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  P  D  T  A
                    Query_2403   181  GTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCCCGGACACCGC  270
V  97.2% (281/289)  IGHV5-51*03  186  ........................C....C....A..................A.........................T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2403   271  CATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  97.2% (281/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (15/15)   IGHD6-19*01  4    ----------------------------------...............----------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   ----------------------------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_269694

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           357     1e-100
IGHD6-19*01                                                                                           18.0    0.64  
IGHJ2*01                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAA	CAGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAACAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQQWLPGDWYFDL	261	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	20	4	0	83.3
FR2-IMGT	75	125	51	46	5	0	90.2
CDR2-IMGT	126	146	21	18	3	0	85.7
FR3-IMGT	147	260	114	109	5	0	95.6
CDR3-IMGT (germline)	261	266	6	6	0	0	100
Total	N/A	N/A	266	247	19	0	92.9


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  S  V  S  G  D  S  I  T  R  N  Y  W  S  W  I  R  
                    Query_2404   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCACTAGAAACTACTGGAGCTGGATCCGGC  90
V  92.9% (247/266)  IGHV4-59*08  26   ................T.........................C...........G........G...TT.....................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  E  R  L  E  W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_2404   91   AGCCCCCAGGTGAGAGACTGGAGTGGATTGCATATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  92.9% (247/266)  IGHV4-59*08  116  ..........GA..G...............GG......T...........AG......................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  L  D  T  S  K  N  Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  F  
                    Query_2404   181  TATCACTAGACACGTCCAAGAACCAGTTCTCCCTGAAGATGACTTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGATTCC  270
V  92.9% (247/266)  IGHV4-59*08  206  .....G................................C...GC........................G.................----  291
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      --------------CDR3-IMGT----------------------->                                  
                                      L  P  A  V  Q  Q  W  L  P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2404   271  TCCCCGCGGTGCAACAGTGGCTGCCAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  351
D  100.0% (9/9)     IGHD6-19*01  9    --------------.........----------------------------------------------------------  17
J  100.0% (51/51)   IGHJ2*01     3    ------------------------------...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_269697

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_2405   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG..G.T..................................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_2405   91   TGGATTGGATATATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  93.4% (228/244)  IGHV4-59*01  139  ........G...................G.....A............................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W 
                    Query_2405   181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------------------------------------------....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_2405   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (35/35)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_269696

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            408     4e-116
IGHD3-16*01                                                                                           12.2    34    
IGHJ3*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GCTTCC	TGGGGG	CCATGAGA	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATC	ARGFLGAMRDGLDI	273	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	109	5	0	95.6
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	270	9	0	96.8


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  P  T  C  A  I  S  G  D  S  V  S  S  N  S  D  T  W  N  W  
                    Query_2406   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACCCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGATACTTGGAACTGGA  90
V  96.8% (270/279)  IGHV6-1*01   26   .................................T.........................................C.G............  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_2406   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGGAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  96.8% (270/279)  IGHV6-1*01   116  .....................................A....................................................  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  S  S  K  N  Q  F  S  L  Q  L  N  S  V  T  F  E  D  T  A  V  Y  F  
                    Query_2406   181  GTCGAATAACCATTAACCCAGACTCATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTTTCGAGGACACGGCTGTGTATTTCT  270
V  96.8% (270/279)  IGHV6-1*01   206  .............C.........A.........................................CC....................A..  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------------CDR3-IMGT--------------->                                  
                                      C  A  R  G  F  L  G  A  M  R  D  G  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2406   271  GTGCAAGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  348
V  96.8% (270/279)  IGHV6-1*01   296  .........---------------------------------------------------------------------  304
                                      C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  17   ---------------......---------------------------------------------------------  22
J  95.9% (47/49)    IGHJ3*02     2    -----------------------------....C...T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_323657

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           353     9e-100
IGHD3-3*01                                                                                            10.3    118   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTCTTCCGTC	TTGGA	CTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTCTTCCGTCTTGGACTCTTGACCAC	ARDSLPSWTLDH	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  N  F  S  N  N  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2407   1    GGTCCCTGAGACTCTCCTGTGAAGCGTCTGGATTCAACTTCAGCAACAATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-33*01  47   .....................C..............C......T.G.T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  D  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2407   91   AATGGGTGGCAGTTATATGGTATGATGGAAGTAATAAAGACTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (238/250)  IGHV3-33*01  137  .G....................................T......C............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      R  N  T  L  Y  L  H  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  L  P  S  W  T  
                    Query_2407   181  GGAACACACTGTATCTGCACATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGAGATTCTCTTCCGTCTTGGACTC  270
V  95.2% (238/250)  IGHV3-33*01  227  A......G...........A......................................C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-3*01   13   ----------------------------------------------------------------------------------.....---  17

                                      ------->                                  
                                      L  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2407   271  TTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.6% (41/42)    IGHJ4*02     7    .....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_325012

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     2e-87
IGHD4-4*01                                                                                            21.8    0.042
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-4*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAGGCGGGG	GACTACAGTAA	TTGGGGGGGGCTGGACTACCCAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAGGCGGGGGACTACAGTAATTGGGGGGGGCTGGACTACCCAGACTACGGTATGGACGTC	AKDKAGDYSNWGGLDYPDYGMDV	230	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	46	5	0	90.2
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	114	0	0	100
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	212	12	0	94.6


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  V  T  L  T  T  Y  A  M  S  W  V  R  L  G  P  G  K  R  L  E  W  V  S  G  I  S  G  N 
                    Query_2408   14   TCTGGAGTCACTCTTACCACCTATGCCATGAGCTGGGTCCGCCTGGGTCCAGGGAAGCGGCTGGAATGGGTCTCAGGTATTAGTGGTAAT  103
V  94.6% (212/224)  IGHV3-23*01  73   ......T....CT...G..G.......................A..C..........G.......G..........C...........G.  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  V  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 
                    Query_2408   104  GGTGTTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAAC  193
V  94.6% (212/224)  IGHV3-23*01  163  ....G.....................................................................................  252
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><-----------------------------CDR3-IMGT---------------
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  K  A  G  D  Y  S  N  W  G  G  L  D  Y  P  D 
                    Query_2408   194  AGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATAAGGCGGGGGACTACAGTAATTGGGGGGGGCTGGACTACCCAGAC  283
V  94.6% (212/224)  IGHV3-23*01  253  ............................................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  100.0% (11/11)   IGHD4-4*01   2    ------------------------------------------------------...........-------------------------  12
J  100.0% (50/50)   IGHJ6*02     13   ----------------------------------------------------------------------------------------..  14

                                      -------------->                                 
                                       Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2408   284  TACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  331
J  100.0% (50/50)   IGHJ6*02     15   ................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_221308

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            369     2e-104
IGHD6-13*01                                                                                           18.0    0.59  
IGHJ6*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TTCCAGTT	TAGCAGCAG	AGTCGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATTCCAGTTTAGCAGCAGAGTCGGACTACGGTATGGACGTC	ARDSSLAAESDYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_2409   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTACTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  97.2% (243/250)  IGHV3-7*03   47   .................................................T.......G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  S  Y  V  A  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2409   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATCCTATGTGGCGTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (243/250)  IGHV3-7*03   137  .......................................A........AC........................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  S  L  A  A  E  
                    Query_2409   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGGGATTCCAGTTTAGCAGCAGAGT  270
V  97.2% (243/250)  IGHV3-7*03   227  ...................................................................A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-13*01  6    ------------------------------------------------------------------------------.........---  14

                                      T------------------>                                 
                                      S  D  Y  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_2409   271  CGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACAGTCATCGTCTCCTCA  323
J  96.0% (48/50)    IGHJ6*02     13   ---..................................G....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_51299

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           336     1e-94
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCGGGCTGTTAAT	TATGATAGTA	CTAATTTTATTTGGTAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CGGGCTGTTAATTATGATAGTACTAATTTTATTTGGTATTTTGACTTC	RAVNYDSTNFIWYFDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	241	113	109	4	0	96.5
Total	N/A	N/A	241	228	13	0	94.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2410   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCAGGATTCATCTTCAGTAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.6% (228/241)  IGHV3-33*01  47   ............................T.......C........GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  Y  Y  D  G  S  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2410   91   AGTGGGTGGCAGTAATATACTATGATGGAAGTAAAAAGTATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.6% (228/241)  IGHV3-33*01  137  .............T....GG..............T..A..C.................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  N  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  R  A  V  N  Y  D  S  T  N  
                    Query_2410   181  AGAACAACCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGCCGGGCTGTTAATTATGATAGTACTAATT  270
V  94.6% (228/241)  IGHV3-33*01  227  ......CG............................................G........-----------------------------  287
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                
D  100.0% (10/10)   IGHD3-22*01  8    --------------------------------------------------------------------------..........------  17

                                      T------------------>                                  
                                      F  I  W  Y  F  D  F  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_2410   271  TTATTTGGTATTTTGACTTCTGGGGCCAGGGAACCCAGGTCACCGTGTCCTCAG  324
J  93.0% (40/43)    IGHJ4*02     6    -----------.......A.................T.........C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_51298

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           336     1e-94
IGHD1-7*01                                                                                            14.1    8.4  
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCAGTTT	GAACTAC	GGCCTTGGTGCAG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCAGTTTGAACTACGGCCTTGGTGCAGTTTTGATATT	ARHQFELRPWCSFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	233	18	0	92.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  N  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_2411   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAATTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  92.8% (233/251)  IGHV4-39*01  49   .............................................A...G.......................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  T  G  L  T  Y  Y  T  P  S  L  E  S  R  L  T  I  S  V  D  T  S 
                    Query_2411   91   CTGGAGTGGATTGGGAGCATCTATTATACTGGGCTCACCTACTACACCCCGTCCCTCGAGAGTCGACTCACCATATCCGTGGACACGTCC  180
V  92.8% (233/251)  IGHV4-39*01  139  .................T..........G....AG...........A..........A........G.............A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  Q  F  S  L  S  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Q  F  E  L  R  P 
                    Query_2411   181  AGAAACCAGTTCTCCCTGAGCCTCAGCTCTGTGACCGCCGCAGATACGGCTGTATATTACTGTGCGAGACATCAGTTTGAACTACGGCCT  270
V  92.8% (233/251)  IGHV4-39*01  229  .AG................AG..G....................C........G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD1-7*01   11   ------------------------------------------------------------------------------.......-----  17

                                      ----------------->                                  
                                       W  C  S  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2411   271  TGGTGCAGTTTTGATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  97.7% (43/44)    IGHJ3*02     7    --------.........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_51291

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-26*01                                                                                           383     1e-108
IGHD2-21*01                                                                                           14.1    8.7   
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-26*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGGA	CGGTA	ATTGTGG	C	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGACGGTAATTGTGGCCTACGGTATGGACGTC	ARTVIVAYGMDV	263	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	45	1	0	97.8
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	109	5	0	95.6
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	269	257	12	0	95.5


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  V  S  G  F  S  L  S  N  E  R  M  S  V  S  W  I  R
                    Query_2412   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCGTCTCTGGGTTCTCACTCAGTAATGAGAGAATGAGTGTGAGCTGGATCCG  90
V  95.5% (257/269)  IGHV2-26*01  30   ................G...........................................C....CT......G................  119
                                        L  V  K  P  T  E  T  L  T  L  T  C  T  V  S  G  F  S  L  S  N  A  R  M  G  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  H  I  F  S  N  D  E  K  S  Y  S  T  S  L  Q  S  R  L  T
                    Query_2412   91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACACATTTTCTCGAATGACGAGAAATCCTATAGCACATCTCTGCAGAGCAGGCTCAC  180
V  95.5% (257/269)  IGHV2-26*01  120  ..........................................T...........A........C............A.............  209
                                        Q  P  P  G  K  A  L  E  W  L  A  H  I  F  S  N  D  E  K  S  Y  S  T  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  K  D  T  S  K  S  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  T
                    Query_2412   181  CATCTCTAAGGACACCTCCAAAAGCCAGGTGGTCCTTACCATGACAAACATGGACCCTGTGGACACAGCCACTTATTACTGTGCACGGAC  270
V  95.5% (257/269)  IGHV2-26*01  210  ......C......................................C..........................A................-  298
                                        I  S  K  D  T  S  K  S  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                      ------CDR3-IMGT------------>                                 
                                        V  I  V  A  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2412   271  GGTAATTGTGGCCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  331
D  100.0% (7/7)     IGHD2-21*01  6    ----.......--------------------------------------------------  12
J  100.0% (49/49)   IGHJ6*02     14   ------------.................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_51292

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           307     1e-85
IGHD3-10*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGAGTCAAA	TACTCTGGTTCGGTGAG	GGTAAAA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGAGTCAAATACTCTGGTTCGGTGAGGGTAAAAACTACTTTGATTCC	AKPSQILWFGEGKNYFDS	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	30	29	29	0	0	100
CDR1-IMGT	31	54	24	18	6	0	75
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	129	24	19	5	0	79.2
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	248	222	26	0	89.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  N  N  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2413   2    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAACAACTTTGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGG  91
V  89.5% (222/248)  IGHV3-30*18  47   ....................................C.....GT.G..A...C................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  E  G  S  K  K  F  Y  A  D  S  L  R  G  R  F  T  I  S  K  D  N  S  
                    Query_2413   92   AGTGGGTGGCAGTGATCTCTTATGAGGGAAGTAAGAAGTTCTATGCAGACTCCTTGAGGGGCCGATTTACCATCTCCAAAGACAATTCCA  181
V  89.5% (222/248)  IGHV3-30*18  137  .............T..A..A.....T........T..A.A.............G...A.........C..........G...........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  V  F  L  Q  M  S  S  L  T  A  E  D  T  A  V  Y  F  C  A  K  P  S  Q  I  L  W  F  
                    Query_2413   182  AGAACACAGTGTTTCTGCAAATGAGCAGCCTGACCGCTGAGGACACGGCTGTCTATTTCTGTGCGAAACCGAGTCAAATACTCTGGTTCG  271
V  89.5% (222/248)  IGHV3-30*18  227  .......GC...A...........A........GA.................G....A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.2% (15/17)    IGHD3-10*01  5    ------------------------------------------------------------------------------....A.......  16

                                      IMGT--------------------->                                  
                                      G  E  G  K  N  Y  F  D  S  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_2413   272  GTGAGGGTAAAAACTACTTTGATTCCTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  331
D  88.2% (15/17)    IGHD3-10*01  17   .G...-------------------------------------------------------  21
J  93.8% (45/48)    IGHJ4*02     1    ------------..........C.A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_51295

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            385     5e-109
IGHD6-19*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTCGGCAGC	GGGTATAGTCGTGCCTGGT	TCTTCCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCGGCAGCGGGTATAGTCGTGCCTGGTTCTTCCTTCTTTGACGAC	ARESAAGIVVPGSSFFDD	290	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	76	69	66	3	0	95.7
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	19	5	0	79.2
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  I  S  C  K  A  S  G  Y  T  F  T  A  Y 
                    Query_2414   8    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGATACACCTTCACTGCCTAT  97
V  92.4% (268/290)  IGHV1-3*01   7    .....T...........G.................................G................................AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       V  I  H  W  M  R  Q  A  P  G  Q  R  L  E  W  M  G  W  V  N  P  A  Y  G  S  T  K  Y  S  Q 
                    Query_2414   98   GTTATACATTGGATGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGGTCAACCCTGCCTATGGTAGCACAAAGTATTCACAG  187
V  92.4% (268/290)  IGHV1-3*01   97   .C...G......G.........................................A.....G...G.A......A......A.........  186
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  F  Q  G  R  V  T  I  T  G  D  T  S  A  S  T  A  Y  M  H  L  S  S  L  R  S  D  D  T  A 
                    Query_2414   188  AGGTTTCAGGGCAGAGTCACCATTACCGGCGACACATCCGCGAGCACAGCCTACATGCACCTGAGCAGTCTGAGATCTGATGACACGGCT  277
V  92.4% (268/290)  IGHV1-3*01   187  .A...C.....................A.G...........................G.G........C...........A.........  276
                                       K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  E  S  A  A  G  I  V  V  P  G  S  S  F  F  D  D  W  G  Q  G  T  L  V  T 
                    Query_2414   278  GTGTATTACTGTGCGAGAGAGTCGGCAGCGGGTATAGTCGTGCCTGGTTCTTCCTTCTTTGACGACTGGGGCCAGGGAACCCTGGTCACC  367
V  92.4% (268/290)  IGHV1-3*01   277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  84.2% (16/19)    IGHD6-19*01  1    -----------------------------........CA...G.....------------------------------------------  19
J  97.7% (43/44)    IGHJ4*02     5    --------------------------------------------------------.......T..........................  38

                                                
                                       V  S  S  
                    Query_2414   368  GTCTCCTCAG  377
J  97.7% (43/44)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_36953

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           288     5e-80
IGHD3-22*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAC	ATAGTACTGG	CCGAATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATAGTACTGGCCGAATCATTGACTAT	ARAHSTGRIIDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G 
                    Query_2415   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  86.8% (217/250)  IGHV4-31*01  49   ...................C................A...G.A....TGG..A...C....G.............CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  H  I  Y  H  V  E  S  T  S  R  N  P  S  L  K  S  Q  L  T  I  S  L  D  P  S 
                    Query_2415   91   CTGGAGTGGATGGGACACATCTATCACGTTGAGAGCACCTCCCGCAACCCGTCCCTCAAGAGTCAACTTACCATTTCACTCGACCCGTCT  180
V  86.8% (217/250)  IGHV4-31*01  139  ...........T..GT........T..AG..G........A.TA....................T.G.......A...G.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  S  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  S  T  G  R  I 
                    Query_2415   181  AAGAGCCAGTTCTCCCTAAAACTGACCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCACATAGTACTGGCCGAATC  270
V  86.8% (217/250)  IGHV4-31*01  229  ....A............G..G....G....G.......................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-22*01  12   -------------------------------------------------------------------------......G...-------  21

                                      -------->                                  
                                       I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2415   271  ATTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.6% (41/42)    IGHJ4*02     7    -.......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_51297

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           333     1e-93
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAGTACCAA	ATAGCAGT	CCAATACCCACC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCCAGTACCAAATAGCAGTCCAATACCCACCCTTTGACTTC	VRGQYQIAVQYPPFDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  L  T  D  Y  A  M  Y  W  V  R  Q  A  P  G  K  G  P  
                    Query_2416   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTGACTGACTATGCAATGTACTGGGTCCGCCAGGCTCCAGGCAAGGGGCCGG  90
V  92.8% (231/249)  IGHV3-30*03  47   ....................................C...C.G.AG.....GC...C..............................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  H  G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  
                    Query_2416   91   AGTGGGTGGCCCTTATATCATATCATGGAAGTAATAAATTCTATGCAGACTCCGTGAAGGGCCGATTTACCATCTCCAGAGACATTTCCA  180
V  92.8% (231/249)  IGHV3-30*03  137  ..........AG...........G...............A...........................C................A.....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  G  Q  Y  Q  I  A  V  
                    Query_2416   181  AGAGCACGCTATATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGTGAGAGGCCAGTACCAAATAGCAGTCC  270
V  92.8% (231/249)  IGHV3-30*03  227  ...A......G....................................................C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  5    --------------------------------------------------------------------------------........--  12

                                      T------------------>                                  
                                      Q  Y  P  P  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2416   271  AATACCCACCCTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.7% (43/44)    IGHJ4*02     5    ----------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_83762

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           272     2e-75
IGHD5-18*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACGA	CTCCCCCAA	GTGGATACGACTATGG	CCT	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGACTCCCCCAAGTGGATACGACTATGGCCTCTATTTTGACTCT	TTPPSGYDYGLYFDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	210	36	0	85.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  P  S  G  F  T  F  S  G  H  A  M  T  W  V  R  R  A  P  G  R  G  L  
                    Query_2417   1    GGTCCCTGAGACTCTCCTGTGCACCCTCTGGCTTCACTTTTAGTGGCCATGCCATGACCTGGGTCCGCCGAGCTCCAGGGAGGGGGCTGG  90
V  85.4% (210/246)  IGHV3-23*01  47   .......................G.......A.....C.....CA..T.........G...........AG..........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  G  T  G  T  R  T  F  Y  A  D  S  V  K  S  R  F  T  I  S  R  D  N  R  
                    Query_2417   91   AGTGGGTCTCTTCCATCACTGGGACTGGAACTAGAACGTTCTACGCAGACTCCGTGAAGAGCCGGTTCACCATCTCCAGAGACAATCGCA  180
V  85.4% (210/246)  IGHV3-23*01  137  ..........AG.T..T.G...T.G...TGG...C..A.A...................G..........................TC..  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  R  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  T  T  P  P  S  G  Y  D  Y  
                    Query_2417   181  AGAACAGGCTCTATCTGCAAATGAACTCATTGAGAGCCGAAGACACGGCCATATATTATTGTACGACTCCCCCAAGTGGATACGACTATG  270
V  85.4% (210/246)  IGHV3-23*01  227  ......C...G...............AGCC..........G.........G.......C...G...------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  87.5% (14/16)    IGHD5-18*01  1    ---------------------------------------------------------------------------........AG.....  15

                                      ---------------->                                  
                                      G  L  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2417   271  GCCTCTATTTTGACTCTTGGGGCCAGGGAACCCTCGTCACCGTCTCCTCAG  321
D  87.5% (14/16)    IGHD5-18*01  16   .--------------------------------------------------  16
J  91.5% (43/47)    IGHJ4*02     2    ----...C.......AC.................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_174218

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           346     2e-97
IGHD3-10*01                                                                                           21.8    0.045
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TCAGCCCCGGAGATGGG	ACTCTGGTTCGGGG	CCCCGGAGATGGGACTATGGTTCGAAGAAGGGGCAG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGCCCCGGAGATGGGACTCTGGTTCGGGGCCCCGGAGATGGGACTATGGTTCGAAGAAGGGGCAGCTACGATCTGGACGTC	VSPGDGTLVRGPGDGTMVRRRGSYDLDV	243	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  C  Y  M  N  W  I  R  Q  A  P  G  K  G  L  
                    Query_2418   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTGCTACATGAACTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.5% (232/243)  IGHV3-11*01  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  G  R  S  G  R  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2418   91   AGTGGATTTCGTACATTGGTCGCAGTGGTAGAACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  95.5% (232/243)  IGHV3-11*01  137  .....G....A......A..A.T........T..........................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  S  P  G  D  G  T  L  V  
                    Query_2418   181  AGAACTCACTTTATCTGCAAATGAACAGCCTGAGAGCCGATGACACGGCCGTCTATTACTGTGTCAGCCCCGGAGATGGGACTCTGGTTC  270
V  95.5% (232/243)  IGHV3-11*01  227  ..........G.............................G...........G..........---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  92.9% (13/14)    IGHD3-10*01  6    --------------------------------------------------------------------------------...A......  15

                                      ----------CDR3-IMGT------------------------------------>                                 
                                      R  G  P  G  D  G  T  M  V  R  R  R  G  S  Y  D  L  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_2418   271  GGGGCCCCGGAGATGGGACTATGGTTCGAAGAAGGGGCAGCTACGATCTGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  359
D  92.9% (13/14)    IGHD3-10*01  16   ....-------------------------------------------------------------------------------------  19
J  93.9% (46/49)    IGHJ6*02     14   ----------------------------------------.....G.A.......................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_174219

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	273	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_2419   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  94.8% (273/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_2419   91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  94.8% (273/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  P  A
                    Query_2419   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACCCCGC  270
V  94.8% (273/288)  IGHV5-51*01  186  ...............G.........................T.........................A.................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2419   271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  94.8% (273/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_110638

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           324     8e-91
IGHD2-15*01                                                                                           35.3    4e-06
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CT	GGATATTGTGCTGTTGGTAGCTGCTAC	CAACGCTACTCCGGGT	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGCTGGATATTGTGCTGTTGGTAGCTGCTACCAACGCTACTCCGGGTCTTTTGATATC	VKAGYCAVGSCYQRYSGSFDI	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  A  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_2420   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCGCCTTCAGTTCCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGGAGGGGACTGG  90
V  91.6% (228/249)  IGHV3-64*05  47   ...................................A........AG......T............................A........  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  L  S  D  G  S  N  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2420   91   AATATGTTTCAGCTATTCTTAGTGATGGGAGTAACACATACTACACAGACTCAGTGAAGGGCAGATTTACCATCTCCAGAGACAATTCCA  180
V  91.6% (228/249)  IGHV3-64*05  137  .................AG....A.....G...G..........G......................C......................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      N  D  M  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  A  G  Y  C  A  V  G  
                    Query_2420   181  ACGACATGTTGTATCTTCAAATGAGCAGTCTGAGACCGGAGGACACGGCTGTCTATTATTGTGTGAAAGCTGGATATTGTGCTGTTGGTA  270
V  91.6% (228/249)  IGHV3-64*05  227  .GA...C.C.....G....................G.T..............G.....C..........---------------------  295
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  88.9% (24/27)    IGHD2-15*01  2    -----------------------------------------------------------------------.........AG..G.....  20

                                      DR3-IMGT-------------------------->                                  
                                      S  C  Y  Q  R  Y  S  G  S  F  D  I  W  G  Q  G  A  M  V  S  V  S  S  
                    Query_2420   271  GCTGCTACCAACGCTACTCCGGGTCTTTTGATATCTGGGGCCAAGGGGCAATGGTCTCCGTCTCTTCAG  339
D  88.9% (24/27)    IGHD2-15*01  21   ........-------------------------------------------------------------  28
J  95.6% (43/45)    IGHJ3*02     6    ------------------------.......................A........A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_83763

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCCA	GGTTCGGGGAGTTAT	CAGGGT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCCAGGTTCGGGGAGTTATCAGGGTTGGCTCCACCCC	ARPGSGSYQGWLHP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  P  Y  Y  W  I  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2421   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGTCCTTACTACTGGATCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.1% (223/242)  IGHV4-59*01  49   ..................A............G..........AG...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  H  I  F  Y  T  G  S  T  K  Y  K  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  K 
                    Query_2421   91   TGGCTTGGCCATATCTTTTACACTGGGAGCACCAAATACAAGCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCCAGGAAG  180
V  92.1% (223/242)  IGHV4-59*01  139  ...A....GT......A.....G............C.....C..........................A...G............A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  G  S  G  S  Y  Q  G  W 
                    Query_2421   181  CAGTTCTCCCTGAAACTGCGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGCCAGGTTCGGGGAGTTATCAGGGTTGG  270
V  92.1% (223/242)  IGHV4-59*01  229  ..............G...A.C.........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (15/15)   IGHD3-10*01  11   ------------------------------------------------------------------...............---------  25
J  87.0% (40/46)    IGHJ5*02     6    ---------------------------------------------------------------------------------------...  8

                                      -------->                                  
                                       L  H  P  W  G  L  G  R  L  V  I  V  S  S  
                    Query_2421   271  CTCCACCCCTGGGGCCTGGGAAGACTGGTCATCGTCTCCTCAG  313
J  87.0% (40/46)    IGHJ5*02     9    T..G............A.....CC.......C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_204052

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           403     1e-114
IGHD2-15*01                                                                                           10.3    137   
IGHJ3*01                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GT	CTGCT	TCCGAAGACTTCGGCCCCC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTGCTTCCGAAGACTTCGGCCCCCGATGCTTTTGATTTC	ARGLLPKTSAPDAFDF	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  I  S  C  K  A  S  G  Y  I  F  T  S  Y
                    Query_2422   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCATCTGGATACATCTTCACCAGCTA  90
V  94.5% (274/290)  IGHV1-46*01  6    ..................G.................................G........................C............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  L  S  W  V  R  Q  A  P  E  R  G  L  E  W  M  G  I  I  N  P  S  G  G  I  T  S  Y  A  Q
                    Query_2422   91   CTATCTAAGCTGGGTGCGCCAGGCCCCTGAACGAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTATCACAAGCTACGCACA  180
V  94.5% (274/290)  IGHV1-46*01  96   ....A.GCA.........A..........G..A.........................................G...............  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  A  M  T  R  D  T  S  T  S  T  V  Y  M  Q  L  N  S  L  R  S  E  D  T  A
                    Query_2422   181  GAAGTTCCAGGGCAGAGTCGCCATGACCAGGGACACGTCCACTAGTACAGTCTACATGCAGCTGAACAGCCTGAGATCTGAGGACACGGC  270
V  94.5% (274/290)  IGHV1-46*01  186  ...................A......................G..C............G......G........................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  G  L  L  P  K  T  S  A  P  D  A  F  D  F  W  G  Q  G  T  L  V  T  V  S
                    Query_2422   271  CGTGTATTACTGTGCGAGAGGTCTGCTTCCGAAGACTTCGGCCCCCGATGCTTTTGATTTCTGGGGCCAAGGGACACTGGTCACCGTCTC  360
V  94.5% (274/290)  IGHV1-46*01  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD2-15*01  22   ----------------------.....---------------------------------------------------------------  26
J  95.9% (47/49)    IGHJ3*01     2    ----------------------------------------------............G.................A.............  45

                                           
                                        S  
                    Query_2422   361  TTCAG  365
J  95.9% (47/49)    IGHJ3*01     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_174213

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           318     6e-89
IGHD4-17*01                                                                                           14.1    8.4  
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGAATAC	AG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGAATACAGCAACTGGGTCGACCCC	ARDSGEYSNWVDP	250	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	135	27	19	2	6	70.4
FR3-IMGT	136	249	114	105	9	0	92.1
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	232	19	6	90.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  V  S  S  G  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_2423   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCGTCAGCAGTGGCAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGG  90
V  90.3% (232/257)  IGHV4-61*01  49   ...................C...........G...............T.............G...........................A  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  H  I  Y  N  Y  N  R  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D 
                    Query_2423   91   CTGGAGTGGATCGGTCATATCTATAACTATAACAGAGGGAGCACCAATTATAATCCCTCCCTCCAAAGTCGAGTCACCATATCAGTAGAC  180
V  90.3% (232/257)  IGHV4-61*01  139  ...........T..GT........T..------..T...........C..C..C.........A.G........................  222
                                       L  E  W  I  G  Y  I  Y  Y        S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------CDR3-I
                                       T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  G  E  Y 
                    Query_2423   181  ACATCCAAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATTCCGGTGAATAC  270
V  90.3% (232/257)  IGHV4-61*01  223  ..G........................C...G...........................G.................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  90.0% (9/10)     IGHD4-17*01  7    --------------------------------------------------------------------------------......C...  16

                                      MGT-------------->                                  
                                       S  N  W  V  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2423   271  AGCAACTGGGTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  98.0% (49/50)    IGHJ5*02     2    --.......T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_174211

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           357     1e-100
IGHD3-3*01                                                                                            18.0    0.57  
IGHJ6*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAGTAGAG	TACGATTTT	C	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAGAGTAGAGTACGATTTTCGGACGTC	VRESRVRFSDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_2424   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCACTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-11*01  47   .....................................C....G...............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  S  S  G  S  T  I  V  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2424   91   AGTGGCTTTCATACATTAGTAGTAGTGGTAGTACCATAGTCTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCTG  180
V  95.6% (239/250)  IGHV3-11*01  137  .....G................................TA................................................CA  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      E  N  S  V  Y  L  Q  M  N  S  V  R  V  E  D  T  A  V  Y  Y  C  V  R  E  S  R  V  R  F  S  
                    Query_2424   181  AGAACTCAGTGTATCTGCAAATGAACAGCGTGAGAGTCGAGGACACGGCCGTGTATTACTGTGTGAGAGAGAGTAGAGTACGATTTTCGG  270
V  95.6% (239/250)  IGHV3-11*01  227  ........C....................C......C..........................C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD3-3*01   5    ------------------------------------------------------------------------------.........---  13
J  100.0% (40/40)   IGHJ6*02     23   ----------------------------------------------------------------------------------------..  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2424   271  ACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  308
J  100.0% (40/40)   IGHJ6*02     25   ......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_174216

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           297     7e-83
IGHD5-12*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCTCTGGTGGAGGGCGTGACA	GATATAGTGGCTACGAT	GGACCTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCTCTGGTGGAGGGCGTGACAGATATAGTGGCTACGATGGACCTTATGACTAT	AKDRSGGGRDRYSGYDGPYDY	230	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	20	4	0	83.3
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	19	5	0	79.2
FR3-IMGT	116	229	114	107	7	0	93.9
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	207	17	0	92.4


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  S  I  S  V  Y  A  M  S  W  V  R  Q  A  P  G  K  G  P  E  W  V  S  A  I  S  S  S 
                    Query_2425   14   TCTGGATTCAGCATTAGCGTCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGGAGTGGGTCTCAGCTATTAGTAGTAGT  103
V  92.4% (207/224)  IGHV3-23*01  73   ..........C.T.....AG.........................................T......................G.....  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  T  G  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  T  S  K  N  T  L  Y  L  Q  M  N 
                    Query_2425   104  GGAACTGGCACATACTACGCGGACTCTGTGAAGGGCCGGTTCACCGTCTCCAGAGACACTTCCAAGAACACGCTGTATCTGCAAATGAAC  193
V  92.4% (207/224)  IGHV3-23*01  163  ..TGG.A.............A.....C..................A............A...............................  252
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><--------------------------CDR3-IMGT------------------
                                       R  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  R  S  G  G  G  R  D  R  Y  S  G  Y  D  G  P 
                    Query_2425   194  AGACTGAGAGCCGACGACACGGCCGTTTATTACTGTGCGAAAGATCGCTCTGGTGGAGGGCGTGACAGATATAGTGGCTACGATGGACCT  283
V  92.4% (207/224)  IGHV3-23*01  253  ..C...........G...........A.................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  100.0% (17/17)   IGHD5-12*01  4    -------------------------------------------------------------------.................------  20

                                      -------->                                  
                                       Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2425   284  TATGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  326
J  97.6% (40/41)    IGHJ4*02     8    --......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_174217

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         355     4e-100
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CATGGA	GGTCCGGGGAATTA	CCAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACATGGAGGTCCGGGGAATTACCAGTTTGACTGC	ARHGGPGNYQFDC	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	96	18	0	84.2
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	258	31	0	89.3


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  D  T  K
                    Query_2426     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAGGATCTCCTGTAAGGCTTCTGGATACAGTTTTGACACCAA  90
V  89.3% (258/289)  IGHV5-10-1*01  6    ..............................A........G.........................G............C...AC..G.T.  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  H  Y  N  S
                    Query_2426     91   GTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATAGATCCCAGTGACTCTTATACCCATTACAACTC  180
V  89.3% (258/289)  IGHV5-10-1*01  96   C.......G................................................T.....T...............A.C....G.C.  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  V  D  R  S  P  T  T  A  Y  M  Q  W  T  S  L  E  A  S  D  S  G
                    Query_2426     181  GTCCTTCCAAGGACACGTCACCATCTCGGTTGACAGGTCCCCCACCACTGCCTACATGCAGTGGACCAGCCTGGAGGCCTCGGACAGCGG  270
V  89.3% (258/289)  IGHV5-10-1*01  186  ............C..............A.C.....A....AT..G..........C.........G.......A............C..C  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          I  Y  F  C  A  R  H  G  G  P  G  N  Y  Q  F  D  C  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_2426     271  CATTTATTTCTGTGCGCGACATGGAGGTCCGGGGAATTACCAGTTTGACTGCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  356
V  89.3% (258/289)  IGHV5-10-1*01  276  ...G....A.......A..-------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                    
D  85.7% (12/14)    IGHD3-10*01    11   -------------------------...T......G...-----------------------------------------------  24
J  95.3% (41/43)    IGHJ4*02       6    -------------------------------------------.......A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_174214

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     1e-124
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_2427   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  98.3% (284/289)  IGHV5-51*01  6    .............................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_2427   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2427   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2427   271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_2427   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_204055

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD5-12*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CCA	ATATAGTGGC	CCCCAGATCC	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGCCAATATAGTGGCCCCCAGATCCGCTTTCGATATC	GKANIVAPRSAFDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  A  M  T  W  V  R  Q  V  P  G  K  G  L  
                    Query_2428   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAGCAACTATGCCATGACCTGGGTCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-23*01  47   .....................C.......................G...........G..............C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  Q  S  A  Y  Y  A  D  S  V  K  G  R  F  T  M  S  R  D  N  S  
                    Query_2428   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTCAAAGTGCATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATGTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-23*01  137  .............................GGT..CA.....................................C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  M  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  G  K  A  N  I  V  A  P  R  
                    Query_2428   181  AGAACACGATGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACAGCCATATATTACTGTGGGAAAGCCAATATAGTGGCCCCCAGAT  270
V  94.4% (235/249)  IGHV3-23*01  227  ........C.....................................G...G............C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD5-12*01  5    ------------------------------------------------------------------------..........--------  14

                                      ------------->                                  
                                      S  A  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2428   271  CCGCTTTCGATATCTGGGGCCAAGGGACACTGGTTACCGTCTCTTCAG  318
J  93.5% (43/46)    IGHJ3*02     5    --.....T.....................A....C.............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_2685

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            394     7e-112
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_2429  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.4% (271/290)  IGHV1-8*02  6    ..................G..........................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_2429  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.4% (271/290)  IGHV1-8*02  96   ........A.........................................................C.......................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_2429  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.4% (271/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2429  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.4% (271/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_185518

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         371     7e-105
IGHD6-19*01                                                                                           21.8    0.046 
IGHJ3*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CACCCCCTC	ATAACAGTGGCTGG	AAGGTTTC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACCCCCTCATAACAGTGGCTGGAAGGTTTCATGCTTTTGAAATC	ARHPLITVAGRFHAFEI	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	263	26	0	91


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  R  V  S  E  D  T  F  T  T  H
                    Query_2430     1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAGAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGTTTCTGAAGACACCTTTACCACCCA  90
V  91.0% (263/289)  IGHV5-10-1*01  6    ....................C.........A...............................A..G.....G.T...G........G.T.  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  L  P  G  K  G  L  E  W  M  G  N  I  D  P  T  D  S  Q  T  N  Y  S  P
                    Query_2430     91   CTGGATCAGCTGGGTGCGCCAGCTGCCAGGGAAAGGCCTGGAGTGGATGGGGAACATTGATCCCACTGACTCTCAAACCAACTACAGCCC  180
V  91.0% (263/289)  IGHV5-10-1*01  96   ......................A....C.........................GG........T.G.......T.T..............  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  F  A  V  G  K  S  T  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_2430     181  GTCCTTCCAAGGCCACGTCACCTTCGCAGTTGGCAAGTCCACTAGCACTGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  91.0% (263/289)  IGHV5-10-1*01  186  ......................A..T...C..A........TC..............................A................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------------CDR3-IMGT-------------------->                          
                                          I  Y  F  C  A  R  H  P  L  I  T  V  A  G  R  F  H  A  F  E  I  W  G  Q  G  T  M  V  T  V
                    Query_2430     271  CATCTATTTCTGTGCGAGACACCCCCTCATAACAGTGGCTGGAAGGTTTCATGCTTTTGAAATCTGGGGCCAAGGGACAATGGTCACCGT  360
V  91.0% (263/289)  IGHV5-10-1*01  276  ...G....A..........-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD6-19*01    5    ----------------------------...G..........------------------------------------------------  18
J  97.9% (47/48)    IGHJ3*02       3    --------------------------------------------------..........T.............................  42

                                                
                                          S  S  
                    Query_2430     361  CTCTTCAG  368
J  97.9% (47/48)    IGHJ3*02       43   ........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_2687

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           279     3e-77
IGHD6-6*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATCG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATCGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	27	25	22	3	0	88
CDR1-IMGT	28	51	24	14	10	0	58.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	126	24	16	8	0	66.7
FR3-IMGT	127	240	114	102	12	0	89.5
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	244	211	33	0	86.5


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        P  R  L  S  C  T  A  S  G  F  P  F  D  G  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  E  W
                    Query_2431   3    CCCGAGACTCTCCTGTACAGCCTCAGGCTTTCCCTTCGACGGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTG  92
V  86.5% (211/244)  IGHV3-21*01  51   ..T.............G.......T..A..CA.....AGTA.C....GC.........................................  140
                                        L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W

                                      ---------><-------CDR2-IMGT------><----------------------------------------------------FR3
                                        V  S  S  I  S  S  R  G  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  D  K  N
                    Query_2431   93   GGTCTCATCCATCAGTAGTAGAGGTGCATATATTCAGTATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGACAAGAA  182
V  86.5% (211/244)  IGHV3-21*01  141  ............T........TA..AGT..C..AT.C..C..A......G..A..............................C......  230
                                        V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N

                                      -IMGT----------------------------------------------------><--------------------CDR3-IMGT--
                                        S  L  Y  L  Q  M  V  G  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  S  S
                    Query_2431   183  TTCACTGTATCTGCAAATGGTCGGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATCGGCTCGTC  272
V  86.5% (211/244)  IGHV3-21*01  231  C..................AA.A.........................G...............--------------------------  294
                                        S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                           
D  100.0% (7/7)     IGHD6-6*01   11   -----------------------------------------------------------------------------------.......  17

                                      ------------------>                                  
                                        R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2431   273  AAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.7% (42/43)    IGHJ4*02     6    ----------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_245315

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           369     2e-104
IGHD3-3*01                                                                                            12.2    37    
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAGCGAC	CGATTT	CTCGGGAATACTTA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAGCGACCGATTTCTCGGGAATACTTATACTACGGTATGGATGTC	AKDKRPISREYLYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	263	27	0	90.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  S  F  T  N  Y 
                    Query_2432   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACGTCTGGTTATAGTTTCACCAACTAC  91
V  90.7% (263/290)  IGHV1-18*04  7    ...............................A...............................G.T........C.CC..T....G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  K  G  N  T  H  Y  G  Q 
                    Query_2432   92   GGTGTCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAAGGGTAACACACACTATGGTCAG  181
V  90.7% (263/290)  IGHV1-18*04  97   ...A....C........................................................C..T.........A......CA...  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  V  M  T  T  E  T  S  T  S  T  V  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_2432   182  AAGTTCCAGGGCAGAGTCGTCATGACGACAGAGACATCCACGAGCACAGTCTACATGGAGTTGCGGAGTCTGAGATCTGACGACACGGCC  271
V  90.7% (263/290)  IGHV1-18*04  187  ...C..............AC......C.....C................C..........C..A....C.....................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  K  D  K  R  P  I  S  R  E  Y  L  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_2432   272  GTCTATTACTGCGCGAAAGATAAGCGACCGATTTCTCGGGAATACTTATACTACGGTATGGATGTCTGGGGCCAGGGGACCACGGTCACC  361
V  90.7% (263/290)  IGHV1-18*04  277  ..G........T....G...----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD3-3*01   7    ----------------------------......--------------------------------------------------------  12
J  96.0% (48/50)    IGHJ6*02     12   ------------------------------------------------..............C...........A...............  53

                                              
                                       V  S  S
                    Query_2432   362  GTCTCCTC  369
J  96.0% (48/50)    IGHJ6*02     54   ........  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_245312

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           315     5e-88
IGHD6-19*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCAAC	GGGTATAGAAGTGGC	AGATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAACGGGTATAGAAGTGGCAGATAACTACTACTATGGTTTGGACGTC	AATGIEVADNYYYGLDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  H  G  M  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_2433   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAGTCATGGCATGCAGTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.0% (223/245)  IGHV3-30*03  47   ...........................................T..CT..........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  F  N  G  S  H  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_2433   91   AATGGTTGGCAGTTATCTCATTTAATGGAAGTCATACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  91.0% (223/245)  IGHV3-30*03  137  .G...G..........A....A.G........A...A...........................A......A..................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  A  L  Y  L  Q  M  A  S  L  R  S  A  D  T  A  V  Y  F  C  A  A  T  G  I  E  V  A  D  
                    Query_2433   181  AGAACGCACTGTATCTGCAAATGGCCAGCCTGAGATCTGCGGACACGGCTGTTTACTTCTGTGCGGCAACGGGTATAGAAGTGGCAGATA  270
V  91.0% (223/245)  IGHV3-30*03  227  .....A.G...............AA..........G...A............G..T.A.......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.3% (14/15)    IGHD6-19*01  1    ----------------------------------------------------------------------........C......-----  15

                                      GT-------------------->                                 
                                      N  Y  Y  Y  G  L  D  V  W  G  H  G  T  T  V  T  V  S  S 
                    Query_2433   271  ACTACTACTATGGTTTGGACGTCTGGGGCCACGGGACCACGGTCACCGTCTCCTCA  326
J  94.6% (53/56)    IGHJ6*02     7    ..........C...A................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_245313

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            377     9e-107
IGHD2-21*02                                                                                           14.1    8.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TC	GGTGGTAACT	CCATGAGGTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTCGGTGGTAACTCCATGAGGTATGGTATGGACGTC	ARVGGNSMRYGMDV	252	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	137	27	27	0	0	100
FR3-IMGT	138	251	114	111	3	0	97.4
CDR3-IMGT (germline)	252	258	7	7	0	0	100
Total	N/A	N/A	255	248	7	0	97.3


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R  Q  S  P  S  R  G  
                    Query_2434   4    CCCTGAGACTCTCCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCC  93
V  97.3% (248/255)  IGHV6-1*01   50   ....CTC....A..............................................................................  139
                                         L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R  Q  S  P  S  R  G  

                                      ----------------><--------CDR2-IMGT--------><---------------------------------------------
                                      L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R  I  I  I  N  P  D  
                    Query_2434   94   TTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAATCATCAACCCAGACA  183
V  97.3% (248/255)  IGHV6-1*01   140  ...........................................................................C..............  229
                                      L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R  I  T  I  N  P  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      T  S  K  N  Q  F  S  L  Q  L  K  S  V  T  P  E  D  T  A  V  Y  Y  C  A  R  V  G  G  N  S  
                    Query_2434   184  CATCCAAGAACCAGTTCTCCCTGCAACTGAAGTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGAGTCGGTGGTAACTCCA  273
V  97.3% (248/255)  IGHV6-1*01   230  .........................G.....C...........................................---------------  304
                                      T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A  R                 
D  90.0% (9/10)     IGHD2-21*02  11   -----------------------------------------------------------------------------......G...---  20

                                      IMGT--------------->                                 
                                      M  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2434   274  TGAGGTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (45/45)   IGHJ6*02     18   --------.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_2683

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           352     3e-99
IGHD3-16*01                                                                                           37.2    1e-06
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCTAGTCTGGAA	TATGATTACGTTCGGGGGAGTT	CTCACCTCAC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCTAGTCTGGAATATGATTACGTTCGGGGGAGTTCTCACCTCACCTGGTTCGACCCC	AREASLEYDYVRGSSHLTWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	235	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  S  I  S  S  H  Y  W  S  W  T  R  Q  P  P  G  K  G  L  E 
                    Query_2435   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCTCCATCAGTAGTCACTACTGGAGCTGGACCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (235/245)  IGHV4-59*01  49   ...................C.........................T...............T............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  T  G  S  T  K  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2435   91   TGGATTGGGTATATGTATTACACTGGGAGCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAT  180
V  95.9% (235/245)  IGHV4-59*01  139  ..............C.......G............C................A....................................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  E  A  S  L  E  Y  D  Y  V 
                    Query_2435   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGAGCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAAGCTAGTCTGGAATATGATTACGTT  270
V  95.9% (235/245)  IGHV4-59*01  229  ...............C............C....................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.5% (21/22)    IGHD3-16*01  5    ------------------------------------------------------------------------------............  16

                                      -IMGT--------------------------->                                  
                                       R  G  S  S  H  L  T  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2435   271  CGGGGGAGTTCTCACCTCACCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  337
D  95.5% (21/22)    IGHD3-16*01  17   T.........---------------------------------------------------------  26
J  100.0% (47/47)   IGHJ5*02     5    --------------------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_245311

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_2436   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_2436   91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_2436   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_2436   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_185511

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           385     4e-109
IGHD3-16*02                                                                                           12.2    33    
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTATCG	ACATTGGTTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTATTTGACTAT	ARHYRHWLFDY	267	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	27	3	0	90
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	152	21	18	3	0	85.7
FR3-IMGT	153	266	114	107	7	0	93.9
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	260	14	0	94.9


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  V  S  L  T  S  S  S  Y  Y  W  G  W  
                    Query_2437   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCCTCACCAGTAGTAGTTACTACTGGGGCTGGA  90
V  94.9% (260/274)  IGHV4-39*01  26   ................T.....................................G....A...G..........................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  
                    Query_2437   91   TCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTTTGTATTATAGTGGCAGCACCTACTACAACCCGTCCCTCAAGAGTCGAG  180
V  94.9% (260/274)  IGHV4-39*01  116  .........................................A.C...........G..................................  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  H  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  
                    Query_2437   181  TCACCATATCCGTGGACACGTCCAAGAACCACTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGA  270
V  94.9% (260/274)  IGHV4-39*01  206  .............A.................G..C........G....G...T.......................G.............  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      --------CDR3-IMGT----------->                                  
                                      R  H  Y  R  H  W  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2437   271  GACATTATCGACATTGGTTATTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
V  94.9% (260/274)  IGHV4-39*01  296  ....-----------------------------------------------------------  299
                                      R                                                              
D  100.0% (6/6)     IGHD3-16*02  25   ----......-----------------------------------------------------  30
J  97.7% (42/43)    IGHJ4*02     6    --------------------........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_83766

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            386     1e-109
IGHD3-10*01                                                                                           14.1    8.7   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TCGGGGA	CTCCTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATCGGGGACTCCTGTTTGACTTC	ARDRGLLFDF	269	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	41	4	0	91.1
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	154	27	26	1	0	96.3
FR3-IMGT	155	268	114	107	7	0	93.9
CDR3-IMGT (germline)	269	276	8	8	0	0	100
Total	N/A	N/A	275	261	14	0	94.9


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  G  I  S  G  D  S  V  S  S  D  T  A  A  W  N  W  I  R 
                    Query_2438   2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGGCATCTCCGGGGACAGTGTCTCTAGCGACACTGCTGCTTGGAACTGGATCAGG  91
V  94.9% (261/275)  IGHV6-1*01   31   ........G...T.G......................C.........................A...G......................  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  K  S  K  W  Y  N  D  Y  A  V  S  V  K  G  R 
                    Query_2438   92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAAGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAGGGTCGA  181
V  94.9% (261/275)  IGHV6-1*01   121  ..............................................G....................................AA.....  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  I  N  S  D  T  S  K  N  Q  F  S  L  H  L  N  S  M  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_2438   182  ATAACCATCAACTCAGACACATCCAAGAACCAGTTCTCCCTGCACCTGAACTCTATGACTCCCGAGGACACGGCTGTATACTACTGTGCA  271
V  94.9% (261/275)  IGHV6-1*01   211  ............C...............................G.........G......................G..T.........  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------CDR3-IMGT--------->                                  
                                       R  D  R  G  L  L  F  D  F  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_2438   272  AGAGATCGGGGACTCCTGTTTGACTTCTGGGGCCAGGGAATCCTGGTCACCGTCTCGTCAG  332
V  94.9% (261/275)  IGHV6-1*01   301  .....--------------------------------------------------------  305
                                       R                                                           
D  100.0% (7/7)     IGHD3-10*01  14   -----.......-------------------------------------------------  20
J  93.0% (40/43)    IGHJ4*02     6    ------------------.......A..............C...............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_185513

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            352     3e-99
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGGC	GGGGGA	CCTACCGTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGCGGGGGACCTACCGTGTTTGACTAC	ARGGGGPTVFDY	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	236	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  T  S  S  S  K  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_2439   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCACCAGCAGTAGTAAATGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.5% (236/247)  IGHV4-4*02   49   ...............................G.....T............C.......G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  Y  H  S  G  S  S  N  Y  S  P  S  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_2439   91   GAGTGGATTGGGGATATCTATCATAGTGGGAGCTCCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  95.5% (236/247)  IGHV4-4*02   139  ..............A..................A.........A..........A...................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  G  P  T  V  F 
                    Query_2439   181  AATCAGTTCTCCCTGAAGCTGACATCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCGGCGGGGGACCTACCGTGTTT  270
V  95.5% (236/247)  IGHV4-4*02   229  ..C...................GC...........................................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------------......------------  23
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2439   271  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (43/43)   IGHJ4*02     9    ........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_185512

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            344     6e-97
IGHD2-8*02                                                                                            19.9    0.15 
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AAAGCGGGCTC	TACTGGTGGT	A	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAAAGCGGGCTCTACTGGTGGTAACTTTGACTAC	ARKAGSTGGNFDY	242	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	28	25	25	0	0	100
CDR1-IMGT	29	52	24	18	6	0	75
FR2-IMGT	53	103	51	48	3	0	94.1
CDR2-IMGT	104	127	24	23	1	0	95.8
FR3-IMGT	128	241	114	112	2	0	98.2
CDR3-IMGT (germline)	242	247	6	6	0	0	100
Total	N/A	N/A	244	232	12	0	95.1


Alignments

                                     <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                       L  R  L  S  C  A  A  S  G  F  I  F  T  H  N  W  M  S  W  V  R  Q  A  P  G  K  W  L  E  W
                    Query_2440  4    CCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTTACTCACAATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGTGGCTGGAGTG  93
V  95.1% (232/244)  IGHV3-7*03  51   ................................CC....G.AG.T...................................G..........  140
                                       L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W

                                     ---------><-------CDR2-IMGT------><----------------------------------------------------FR3
                                       V  A  D  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N
                    Query_2440  94   GGTTGCCGACATAAAGCAGGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAA  183
V  95.1% (232/244)  IGHV3-7*03  141  ...G...A..........A.......................................................................  230
                                       V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N

                                     -IMGT----------------------------------------------------><--------------CDR3-IMGT--------
                                       S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  K  A  G  S  T  G  G  N  F
                    Query_2440  184  CTCAGTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAAAAGCGGGCTCTACTGGTGGTAACTT  273
V  95.1% (232/244)  IGHV3-7*03  231  ....C.G.........................................................--------------------------  294
                                       S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                           
D  100.0% (10/10)   IGHD2-8*02  10   ---------------------------------------------------------------------------..........-----  19
J  100.0% (45/45)   IGHJ4*02    4    --------------------------------------------------------------------------------------....  7

                                     ------>                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2440  274  TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  314
J  100.0% (45/45)   IGHJ4*02    8    .........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_185515

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           344     6e-97
IGHD4-17*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	GACTACGATGA	TAACGGGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGACTACGATGATAACGGGTTACTTTGACTAC	ARETTMITGYFDY	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  G  S  I  S  R  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_2441   4    CCCTGAGACTCTCCTGCAGTGTCTCTGGTGGCTCCATCAGCAGAGGTGGTTATTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  94.0% (235/250)  IGHV4-31*03  50   .....TCC...A......C........................T........C.....................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  V  Y  H  S  G  S  T  H  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_2441   94   TGGAGTGGATTGGGTATGTCTATCACAGTGGGAGCACCCACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  94.0% (235/250)  IGHV4-31*03  140  ................CA.....T..............T...................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  Q  F  F  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  T  T  M  I  T  G  
                    Query_2441   184  AGAACCAGTTCTTCCTGAGGCTGAGTTCAGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGAGACTACGATGATAACGGGTT  273
V  94.0% (235/250)  IGHV4-31*03  230  ............C.....A......C..T.........................................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD4-17*01  2    ----------------------------------------------------------------------.......G...---------  12
J  97.8% (45/46)    IGHJ4*02     3    -----------------------------------------------------------------------------------------.  3

                                      ---------->                                  
                                      Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_2441   274  ACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  97.8% (45/46)    IGHJ4*02     4    ........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_2688

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            282     4e-78
IGHD1-1*01                                                                                            14.1    10.0 
IGHJ6*02                                                                                              75.7    7e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGAAATGT	TGGAACG	GGGTCCTTCCAAGAGCGATGTGCCCCCTTCGGGCTACTCGTCTTCTGTGCCATATCATAGCGACTTTTAT	GGTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACGAAATGTTGGAACGGGGTCCTTCCAAGAGCGATGTGCCCCCTTCGGGCTACTCGTCTTCTGTGCCATATCATAGCGACTTTTATGGTTTGGACGTC	ARDEMLERGPSKSDVPPSGYSSSVPYHSDFYGLDV	243	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	15	9	0	62.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	215	35	0	86


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  T  A  S  G  F  N  F  R  W  S  S  M  T  W  V  R  Q  A  P  G  T  G  L  
                    Query_2442  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCAATTTTAGATGGAGTTCCATGACCTGGGTCCGCCAGGCCCCAGGGACGGGGCTGG  90
V  86.0% (215/250)  IGHV3-7*03  47   ....................G...............CC.....TA.CTA..GG....G...............T.......A........  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  N  E  G  G  R  P  T  F  Y  G  D  S  V  K  G  R  F  A  I  S  R  D  N  S  
                    Query_2442  91   AGTGGGTGGCCAACATAAACGAGGGTGGACGTCCGACATTCTATGGGGACTCTGTGAAGGGCCGATTCGCCATCTCCAGAGACAATTCCA  180
V  86.0% (215/250)  IGHV3-7*03  137  ...................GC.A.A....A..GA..A..A.....T......................A................CG...  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><---------------------------
                                     K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  I  Y  Y  C  A  R  D  E  M  L  E  R  G  
                    Query_2442  181  AGAACTCGCTATATCTGCAAATGGACAGCCTGAGAGTCGAAGACACGGCCATATATTACTGCGCGCGAGACGAAATGTTGGAACGGGGTC  270
V  86.0% (215/250)  IGHV3-7*03  227  .......A..G............A............C...G.........G.G........T...A....--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-1*01  9    ------------------------------------------------------------------------------.......-----  15

                                     --------------------CDR3-IMGT----------------------------------------------->             
                                     P  S  K  S  D  V  P  P  S  G  Y  S  S  S  V  P  Y  H  S  D  F  Y  G  L  D  V  W  G  Q  G  
                    Query_2442  271  CTTCCAAGAGCGATGTGCCCCCTTCGGGCTACTCGTCTTCTGTGCCATATCATAGCGACTTTTATGGTTTGGACGTCTGGGGCCAAGGGA  360
J  97.6% (41/42)    IGHJ6*02    18   -----------------------------------------------------------------...A.....................  42

                                                      
                                     T  T  V  T  V  S 
                    Query_2442  361  CCACGGTCACCGTCTCC  377
J  97.6% (41/42)    IGHJ6*02    43   .................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_130265

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCCCCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCCCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGPRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_2443   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_2443   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  V  S  N  G 
                    Query_2443   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCCCCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_2443   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_245319

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAGGG	AGTAGTGGTTATT	TTAGCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAGGGAGTAGTGGTTATTTTAGCCTC	ARRGSSGYFSL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  K  G  S  D  F  S  F  A  R  N
                    Query_2444   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGATTTCAGTTTTGCCAGGAA  90
V  94.5% (274/290)  IGHV5-51*01  6    ..........................................G............................GA.A...C...A....CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  N  I  Y  P  H  D  S  D  T  R  Y  S  P
                    Query_2444   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTAGAGTGGATGGGGAACATCTATCCTCATGACTCTGATACCAGATACAGCCC  180
V  94.5% (274/290)  IGHV5-51*01  96   ......................A................G.............T..........GG........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  T  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2444   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (274/290)  IGHV5-51*01  186  ...................................A.................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        M  Y  Y  C  A  R  R  G  S  S  G  Y  F  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2444   271  CATGTATTATTGTGCGAGACGAGGGAGTAGTGGTTATTTTAGCCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  94.5% (274/290)  IGHV5-51*01  276  .........C..........------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (13/13)   IGHD3-22*01  14   -------------------------.............------------------------------------------  26
J  100.0% (35/35)   IGHJ4*02     14   ---------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_100968

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           405     4e-115
IGHD2-21*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	ATTTTGGTGG	ATAGAGATAGAGTTCC	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTC	ARGGFWWIEIEFRMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  Y 
                    Query_2445   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACCGACTAT  91
V  94.8% (274/289)  IGHV1-18*01  7    .............................................................................C......AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  W  I  S  A  Y  T  G  N  T  K  N  A  Q 
                    Query_2445   92   GGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGATGGATCAGCGCTTACACTGGTAATACAAAAAATGCACAA  181
V  94.8% (274/289)  IGHV1-18*01  97   .......G.....................................A.....................A......C.....CT.......G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  V  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_2445   182  AAAGTCCAGGGCAGAGTGACCATGACCACAGACACATCCACGAGAACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (274/289)  IGHV1-18*01  187  ..GC.............C..........................C...............C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  G  G  F  W  W  I  E  I  E  F  R  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_2445   272  GTGTATTACTGTGCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  361
V  94.8% (274/289)  IGHV1-18*01  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD2-21*01  6    -----------------------...G......---------------------------------------------------------  15
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------.........................................  59

                                         
                                       S 
                    Query_2445   362  TCA  364
J  100.0% (44/44)   IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_83764

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           367     5e-104
IGHD3-3*01                                                                                            39.1    2e-07 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	T	TTACGATTTTTTGAGTGGTTATT	N/A	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATTTACGATTTTTTGAGTGGTTATTACTTC	AIYDFLSGYYF	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	238	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2446   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (238/241)  IGHV4-34*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2446   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTGAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (238/241)  IGHV4-34*01  139  ..................................................C.......................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  I  Y  D  F  L  S  G  Y  Y  F 
                    Query_2446   181  CAGTTCTCCCTGAAACTGAGCTCTCTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGATTTACGATTTTTTGAGTGGTTATTACTTC  270
V  98.8% (238/241)  IGHV4-34*01  229  ..............G.........G....................................-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.7% (22/23)    IGHD3-3*01   4    --------------------------------------------------------------...........G...........-----  26
J  97.4% (38/39)    IGHJ4*02     10   -------------------------------------------------------------------------------------...A.  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2446   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  97.4% (38/39)    IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_100962

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           293     2e-81
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	215	28	0	88.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_2447   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAGT  93
V  88.5% (215/243)  IGHV4-59*01  50   .....TCC...A....C....................C...A..T.........GC....................G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N  
                    Query_2447   94   GGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAATC  183
V  88.5% (215/243)  IGHV4-59*01  140  .......G...A.........G.................A..C.......A.....................TA...A..........C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P  
                    Query_2447   184  AGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCCT  273
V  88.5% (215/243)  IGHV4-59*01  230  ..........G...C....C...........T............G.G....A...........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD7-27*01  4    ----------------------------------------------------------------........------------------  11
J  95.7% (44/46)    IGHJ5*02     6    -----------------------------------------------------------------------------.............  18

                                                                       
                                      W  G  Q  G  A  L  V  S  V  S  S  
                    Query_2447   274  GGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  306
J  95.7% (44/46)    IGHJ5*02     19   ...........A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_100960

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           327     8e-92
IGHD3-10*01                                                                                           10.3    117  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_2448   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-21*01  47   ............................................AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  T  T  S  E  F  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_2448   91   AGTGGGTCTCATCCATTAGTACTACTAGTGAGTTCATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  92.0% (229/249)  IGHV3-21*01  137  .....................G..G....AGT.A......C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  S  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_2448   181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGCGCCGAGGACACGGCTCTCTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTT  270
V  92.0% (229/249)  IGHV3-21*01  227  ............A......A..............A...............G.G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2448   271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_100967

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            366     2e-103
IGHD1-26*01                                                                                           21.8    0.043 
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGGGAGG	GGTAGAGTGGGAGGTAC	GGCTTCGAGGCG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGGGAGGGGTAGAGTGGGAGGTACGGCTTCGAGGCGACAACTGGTTCGACCCC	AREGGGVEWEVRLRGDNWFDP	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2449   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTTAGTCGCTACTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-7*01   47   .....................................C......A....T........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  P  D  G  S  E  K  Y  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_2449   91   AGTGGGTGGCCAATATAAAGCCAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (242/250)  IGHV3-7*01   137  .............C.......A...................................A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  G  G  G  V  E  W  
                    Query_2449   181  AGAACTCACTGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGAGGGGGGAGGGGTAGAGTGGG  270
V  96.8% (242/250)  IGHV3-7*01   227  ...................A................................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.2% (15/17)    IGHD1-26*01  1    -------------------------------------------------------------------------------....T......  11

                                      DR3-IMGT-------------------------->                                  
                                      E  V  R  L  R  G  D  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2449   271  AGGTACGGCTTCGAGGCGACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  88.2% (15/17)    IGHD1-26*01  12   ..C...---------------------------------------------------------------  17
J  100.0% (51/51)   IGHJ5*02     1    ------------------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_100966

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           322     2e-90
IGHD3-9*01                                                                                            14.1    8.4  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGTGCTCCCGTATTGCAGTCTGACT	ACTTGTTATT	N/A	TGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGTGCTCCCGTATTGCAGTCTGACTACTTGTTATTTGGAAGTC	ASVLPYCSLTTCYLEV	239	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	21	3	0	87.5
FR3-IMGT	125	238	114	106	8	0	93
CDR3-IMGT (germline)	239	243	5	5	0	0	100
Total	N/A	N/A	230	218	12	0	94.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  I  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 
                    Query_2450   14   TGTGCAGCGTCTGGATTCATCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATA  103
V  94.8% (218/230)  IGHV3-33*01  64   ...................C......................................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       W  Y  D  G  T  K  R  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  N  T  L  Y  L 
                    Query_2450   104  TGGTATGATGGAACTAAAAGATATTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGAACACGCTGTATCTA  193
V  94.8% (218/230)  IGHV3-33*01  154  .............G...T.A...C....C............................................A...............G  243
                                       W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  V  L  P  Y  C  S  L  T  T  C  Y  L  E 
                    Query_2450   194  GAAATGAATAGCCTGAGAGCCGAGGACACGGCTGTCTACTACTGTGCGAGCGTGCTCCCGTATTGCAGTCTGACTACTTGTTATTTGGAA  283
V  94.8% (218/230)  IGHV3-33*01  244  C.......C..........................G..T...........----------------------------------------  293
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  90.0% (9/10)     IGHD3-9*01   17   ---------------------------------------------------------------------------...G......-----  26
J  97.6% (40/41)    IGHJ6*02     22   -------------------------------------------------------------------------------------....C  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2450   284  GTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  319
J  97.6% (40/41)    IGHJ6*02     27   ....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_100965

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     6e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_2451   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_2451   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_2451   181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_2451   271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_63633

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            330     1e-92
IGHD3-10*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTGAC	TATTACGATGGTTC	AGGCAGGTCTTCTGGGGGCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTGACTATTACGATGGTTCAGGCAGGTCTTCTGGGGGCCGACTAC	ASLTITMVQAGLLGADY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  S  T  S  N  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_2452   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATCAGTACTAGTAACTGGTGGACTTGGGTCCGCCAGCCTCCAGGGAAGGGGCTG  90
V  93.1% (228/245)  IGHV4-4*02   49   ..................G............G.........C.G..............G...............C...............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  L  H  S  G  T  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  I  D  K  S  K 
                    Query_2452   91   GAGTGGATTGGGGAAATCCTTCACAGTGGGACCACCAACTACAACCCGTCCCTCAGGAGTCGAGTCACCATCTCAATAGACAAGTCGAAG  180
V  93.1% (228/245)  IGHV4-4*02   139  ..................TA...T.......G.......................A...............A...G..........C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  T  I  T  M  V  Q  A 
                    Query_2452   181  AACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGCCTGACTATTACGATGGTTCAGGCA  270
V  93.1% (228/245)  IGHV4-4*02   229  ................A.....G...........................G..............-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  92.9% (13/14)    IGHD3-10*01  2    -----------------------------------------------------------------------......T.......-----  15

                                      -------------------->                                  
                                       G  L  L  G  A  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_2452   271  GGTCTTCTGGGGGCCGACTACTGGGGCCAGGGGTCCCTAGTCACCGTCTCCTCAG  325
J  92.5% (37/40)    IGHJ4*02     9    ---------------.................AA....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_260555

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           336     1e-94
IGHD1-26*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TGGAGGGAGAG	GTGGGGGCTAC	CTGGGGGTTTC	TTGCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTGGAGGGAGAGGTGGGGGCTACCTGGGGGTTTCTTGCCTAC	AKVEGEVGATWGFLAY	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	21	3	6	70
FR3-IMGT	135	248	114	110	4	0	96.5
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	237	12	6	92.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  G  W  V  R  Q  A  P  E  K  G  L  
                    Query_2453   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTACGCCATGGGCTGGGTCCGCCAGGCTCCAGAGAAGGGGCTGG  90
V  92.9% (237/255)  IGHV3-23*01  47   .............................................G...T......A.....................G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  S  G  I  N  G  S  D  H  G  G  G  S  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  
                    Query_2453   91   AGTGGGTCTCAGGTATTAATGGTAGTGATCATGGTGGTGGCTCATACTATGCAGAGTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACA  180
V  92.9% (237/255)  IGHV3-23*01  137  ............C.....G........------.....A..A.......C.....C..................................  220
                                      E  W  V  S  A  I  S  G  S        G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      N  S  K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  V  E  G  E  V  
                    Query_2453   181  ATTCCAAGAACACGCTGTATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCCTATATTACTGTGCGAAAGTGGAGGGAGAGGTGG  270
V  92.9% (237/255)  IGHV3-23*01  221  .............................A..........................G..................---------------  295
                                      N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                 
D  90.9% (10/11)    IGHD1-26*01  7    --------------------------------------------------------------------------------------....  10

                                      R3-IMGT------------------>                                  
                                      G  A  T  W  G  F  L  A  Y  S  G  R  G  T  L  V  T  V  S  S  
                    Query_2453   271  GGGCTACCTGGGGGTTTCTTGCCTACTCGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  330
D  90.9% (10/11)    IGHD1-26*01  11   .A.....-----------------------------------------------------  17
J  92.9% (39/42)    IGHJ4*02     7    ------------------...A.....G.....A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_1138

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            327     9e-92
IGHD6-6*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GGGC	GTATAGCAGCTCGTCC	GGGGGACC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGGGCGTATAGCAGCTCGTCCGGGGGACCCTTTGACCAC	AKGAYSSSSGGPFDH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  E  A  S  G  F  N  F  D  D  Y  A  M  Y  W  V  R  Q  P  P  G  K  G  L  
                    Query_2454  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCAATTTTGATGATTATGCCATGTATTGGGTCCGACAACCTCCAGGGAAGGGCCTGG  90
V  92.0% (229/249)  IGHV3-9*01  47   .....................C..............CC..................C.C........G...G..................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  I  S  W  N  S  D  T  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2454  91   AGTGGGTCTCGGGTATTAGTTGGAATAGTGACACCATAGGGTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGATAACGCCA  180
V  92.0% (229/249)  IGHV3-9*01  137  ..........A...................GT.G......C.........................................C.......  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                     K  N  S  L  Y  L  Q  M  T  R  L  G  A  K  D  T  A  F  Y  Y  C  A  K  G  A  Y  S  S  S  S  
                    Query_2454  181  AGAACTCCCTCTATCTGCAAATGACCAGACTGGGGGCTAAGGACACGGCCTTCTATTACTGTGCAAAAGGGGCGTATAGCAGCTCGTCCG  270
V  92.0% (229/249)  IGHV3-9*01  227  ..........G.............A...T...A.A...G.............G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (16/16)   IGHD6-6*01  3    -------------------------------------------------------------------------................-  18

                                     ---------------->                                  
                                     G  G  P  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2454  271  GGGGACCCTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.7% (43/44)    IGHJ4*02    5    -------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_332822

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     2e-95
IGHD1-26*01                                                                                           19.9    0.16 
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAATATTGTCA	TGGGAGCTAC	GCCG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAATATTGTCATGGGAGCTACGCCGTGATGTTTTTGATATC	ARGILSWELRRDVFDI	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  Y  T  F  S  G  F  S  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2455   1    GGTCCCTGAGACTCTCCTGTGCTGCCTCTGGATACACATTCAGTGGTTTTAGCATCAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-21*01  47   ......................A..........T...C......A.C.A......G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  G  S  D  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_2455   91   AGTGGGTCTCATCCATTAGTGGTGGTAGTGATTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  93.9% (232/247)  IGHV3-21*01  137  ....................A..A.....AG........................................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  V  V  Y  Y  C  A  R  G  I  L  S  W  E  L  
                    Query_2455   181  AGAACTCACTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGTTGTATATTACTGTGCGAGGGGAATATTGTCATGGGAGCTAC  270
V  93.9% (232/247)  IGHV3-21*01  227  ..........G.....................................C...G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD1-26*01  8    --------------------------------------------------------------------------------..........  17

                                      T------------------>                                  
                                      R  R  D  V  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2455   271  GCCGTGATGTTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
J  98.0% (49/50)    IGHJ3*02     1    ----.....C............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_332825

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           396     2e-112
IGHD1-26*01                                                                                           27.6    9e-04 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  T  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  N  Y
                    Query_2456   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGACAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAATTA  90
V  93.5% (272/291)  IGHV5-51*01  6    .............................A...................................G....................GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  V  G  I  M  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_2456   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGGTGGGGATCATGTATCCTGGTGACTCTGATACCAGATATAGCCC  180
V  93.5% (272/291)  IGHV5-51*01  96   ........G.....................................A..........C..........................C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  R  A  S  D  P  A
                    Query_2456   181  GTCTTTCGAGGGCCACGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTATTTGCAGTGGAGGAGCCTGAGGGCCTCGGACCCCGC  270
V  93.5% (272/291)  IGHV5-51*01  186  ...C...C.A.....G......................................CC..........C.......A..........A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  F  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  P  G  T  T  V
                    Query_2456   271  CATATATTTCTGTGCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTCTGGGGCCCGGGGACCACGGT  360
V  93.5% (272/291)  IGHV5-51*01  276  ...G....A............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (14/14)   IGHD1-26*01  4    -----------------------------..............-----------------------------------------------  17
J  93.0% (53/57)    IGHJ6*02     6    ----------------------------------------------.......A......T................AA...........  49

                                                   
                                        T  V  S  S 
                    Query_2456   361  CACCGTCTCCTCA  373
J  93.0% (53/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_332824

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACAGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	266	20	0	93


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_2457   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  93.0% (266/286)  IGHV5-51*01  6    ..............................A...................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  Q  G  L  E  L  M  G  L  I  H  P  G  D  S  D  T  W  Y  S  P
                    Query_2457   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCAAGGCCTGGAGTTGATGGGGCTCATCCATCCTGGCGACTCTGATACCTGGTACAGTCC  180
V  93.0% (266/286)  IGHV5-51*01  96   ......................A........A............G.......A.....T.......T............A.A.....C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  T  S  A  Y  L  Q  W  T  T  L  K  A  S  D  T  A
                    Query_2457   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCACCTCCGCCTACCTGCAGTGGACCACCCTGAAGGCCTCGGACACCGC  270
V  93.0% (266/286)  IGHV5-51*01  186  ....................C...................A...G.A..................G..G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2457   271  CATTTACTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACAGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  353
V  93.0% (266/286)  IGHV5-51*01  276  ...G..T.........-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------.................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_332827

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            397     8e-113
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_2458  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.8% (272/290)  IGHV1-8*02  6    .............................................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_2458  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.8% (272/290)  IGHV1-8*02  96   ........A.........................................................C.......................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_2458  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.8% (272/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2458  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  353
V  93.8% (272/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  95.0% (38/40)    IGHJ4*02    9    -------------------------------------------....A........................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_332829

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           279     3e-77
IGHD3-10*01                                                                                           12.2    31   
IGHJ2*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGA	CGGGGA	TTGGAAG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGACGGGGATTGGAAGTTCGATCTC	ARHDGDWKFDL	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	97	17	0	85.1
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	214	36	0	85.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  D  S  I  I  S  S  R  F  F  W  G  W  L  R  Q  P  P  K  K  G  
                    Query_2459   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCATCAGTAGTCGTTTCTTCTGGGGCTGGCTCCGCCAGCCCCCAAAGAAGGGGC  93
V  85.6% (214/250)  IGHV4-39*01  50   .....TCC...A..................G........G.......A...A..A..........A..............GG........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  T  I  H  D  S  G  N  R  W  S  N  P  T  L  K  S  R  L  T  I  S  V  D  T  S  
                    Query_2459   94   TGGAGTGGATTGGGACTATCCATGACAGTGGGAACAGATGGTCCAACCCGACCCTCAAGAGTCGACTCACCATATCGGTGGACACGTCCA  183
V  85.6% (214/250)  IGHV4-39*01  140  ...............G....T..T.T.......G..CC.AC.A.......T..............G..........C..A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      M  N  Q  F  S  L  T  I  S  S  M  T  A  A  G  T  A  V  Y  Y  C  A  R  H  D  G  D  W  K  F  
                    Query_2459   184  TGAACCAGTTCTCCCTGACGATTTCCTCTATGACCGCCGCTGGCACGGCTGTCTATTACTGTGCGAGACATGACGGGGATTGGAAGTTCG  273
V  85.6% (214/250)  IGHV4-39*01  230  A.................A.C.GAG....G..........A.A.........G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01  15   -------------------------------------------------------------------------......-----------  20
J  95.3% (41/43)    IGHJ2*01     11   --------------------------------------------------------------------------------------....  14

                                      ---->                                  
                                      D  L  W  G  R  G  S  Q  V  T  V  S  S  
                    Query_2459   274  ATCTCTGGGGCCGTGGCTCCCAGGTCACTGTCTCCTCAG  312
J  95.3% (41/43)    IGHJ2*01     15   .................A...T.................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_1133

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	274	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_2460   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  95.1% (274/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_2460   91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  95.1% (274/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_2460   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  95.1% (274/288)  IGHV5-51*01  186  ...............G.........................T.........................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_2460   271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCGCGGTCACCGTCTCGTCA  346
V  95.1% (274/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  92.3% (48/52)    IGHJ6*02     11   ------------------------........G.A.......................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_1131

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD3-16*01                                                                                           14.1    9.8   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	TGGGGGA	TGGCGACAATTCTGACATTTCG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTC	TRVGDGDNSDISYGMDV	291	341	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	73	1	0	98.6
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	296	6	5	1	0	83.3
Total	N/A	N/A	293	279	14	0	95.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  
                    Query_2461   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTTAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTAGCA  93
V  95.2% (279/293)  IGHV5-51*01  2    ...............................G.................................................G.....C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      I  F  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  I  K  Y  
                    Query_2461   94   TCTTCTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATATCAAATACA  183
V  95.2% (279/293)  IGHV5-51*01  92   G..A....................................................A........................C..G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_2461   184  GTCCGTCCTTCCAAGGCCAGGTCTCCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTTTGAAGGCCTCGGACA  273
V  95.2% (279/293)  IGHV5-51*01  182  .C.....................A.................................................CC...............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  I  Y  Y  C  T  R  V  G  D  G  D  N  S  D  I  S  Y  G  M  D  V  W  G  Q  G  T  K  V  
                    Query_2461   274  CCGCCATCTATTACTGTACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTCTGGGGCCAAGGGACCAAGGTCA  363
V  95.2% (279/293)  IGHV5-51*01  272  .......G.........G.....-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD3-16*01  17   ------------------------.......-----------------------------------------------------------  23
J  95.8% (46/48)    IGHJ6*02     15   -----------------------------------------------------.....T.........................C.....  51

                                                 
                                      T  V  S  S 
                    Query_2461   364  CCGTCTCCTCA  374
J  95.8% (46/48)    IGHJ6*02     52   ...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_1136

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           377     9e-107
IGHD2-2*01                                                                                            18.0    0.61  
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAC	TCACGATTGGAA	TACCAGGTGCTA	AGGGGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGACTCACGATTGGAATACCAGGTGCTAAGGGGGACGGTGTGGACGTC	ARLTIGIPGAKGDGVDV	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	255	7	6	1	0	85.7
Total	N/A	N/A	255	248	7	0	97.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_2462   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  97.3% (248/255)  IGHV3-73*01  47   .........A................................................................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  S  K  T  N  N  Y  A  T  A  Y  A  A  S  V  R  G  R  F  T  I  S  R  D  
                    Query_2462   91   AGTGGGTTGGCCGTATTAGAAGCAAAACTAACAATTACGCGACAGCATATGCTGCGTCGGTGAGAGGCAGGTTCACCATCTCCAGAGATG  180
V  97.3% (248/255)  IGHV3-73*01  137  ..........................G......G.............................A..........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  K  N  T  A  F  L  Q  M  N  S  L  I  T  E  D  T  A  V  Y  Y  C  A  R  L  T  I  G  I  
                    Query_2462   181  ATTCAAAGAACACGGCGTTTCTGCAAATGAACAGCCTGATAACCGAGGACACGGCCGTGTATTACTGTGCTAGACTCACGATTGGAATAC  270
V  97.3% (248/255)  IGHV3-73*01  227  ..................A....................A............................A......---------------  301
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  91.7% (11/12)    IGHD2-2*01   16   ---------------------------------------------------------------------------------------...  18

                                      DR3-IMGT-------------------->                                 
                                      P  G  A  K  G  D  G  V  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_2462   271  CAGGTGCTAAGGGGGACGGTGTGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  332
D  91.7% (11/12)    IGHD2-2*01   19   ...C.....-----------------------------------------------------  27
J  95.7% (45/47)    IGHJ6*02     16   ---------------.....A..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_1134

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           420     7e-120
IGHD5-18*01                                                                                           18.0    0.64  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGCCCC	GGATACGGCCATGGT	CTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGCCCCGGATACGGCCATGGTCTTC	ARVAPDTAMVF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_2463   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTAT  91
V  96.5% (279/289)  IGHV1-18*01  7    ..........................................................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_2463   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAG  181
V  96.5% (279/289)  IGHV1-18*01  97   ..........................................................................................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  I  T  A  D  K  S  T  G  T  A  Y  M  E  L  S  S  L  R  S  D  D  T  A 
                    Query_2463   182  AAGCTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGGGCACAGCGTACATGGAACTGAGCAGCCTGAGATCTGACGACACGGCC  271
V  96.5% (279/289)  IGHV1-18*01  187  ....................C..G...A.A....C.......A.......C........G.....G........................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  F  Y  C  A  R  V  A  P  D  T  A  M  V  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2463   272  GTGTTTTACTGTGCGAGAGTTGCCCCGGATACGGCCATGGTCTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  96.5% (279/289)  IGHV1-18*01  277  ....A..............------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                              
D  86.7% (13/15)    IGHD5-18*01  3    --------------------------......A..T.....--------------------------------------  17
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_9309

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           360     1e-101
IGHD6-19*01                                                                                           31.5    5e-05 
IGHJ5*02                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATCCTC	TAGCAGTGGCTGGTAC	CT	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGATCCTCTAGCAGTGGCTGGTACCTCAACTGGTTCGACCCC	ARGSSSSGWYLNWFDP	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	237	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2464   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  97.1% (237/244)  IGHV4-59*01  49   ...............................G..........................................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  F  I  Y  Y  T  G  S  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2464   91   TGGATTGGGTTTATCTATTACACTGGGAGCGCCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  97.1% (237/244)  IGHV4-59*01  139  ..........A...........G.......A...........................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  S  S  S  G  W  Y  L 
                    Query_2464   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGGATCCTCTAGCAGTGGCTGGTACCTC  270
V  97.1% (237/244)  IGHV4-59*01  229  ............................................................A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (16/16)   IGHD6-19*01  6    -----------------------------------------------------------------------................---  21
J  100.0% (50/50)   IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2464   271  AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (50/50)   IGHJ5*02     3    .................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_77602

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            347     7e-98
IGHD2-15*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCATTGTGGA	AGTGGTGG	CTGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCATTGTGGAAGTGGTGGCTGTTTCTACTTTGACATC	ARVHCGSGGCFYFDI	264	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	77	27	21	6	0	77.8
FR2-IMGT	78	128	51	46	5	0	90.2
CDR2-IMGT	129	149	21	17	4	0	81
FR3-IMGT	150	263	114	106	8	0	93
CDR3-IMGT (germline)	264	270	7	7	0	0	100
Total	N/A	N/A	270	246	24	0	91.1


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  S  D  S  I  S  G  S  D  W  W  T  W  I  
                    Query_2465   1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTAGTGACTCCATCAGCGGTTCTGACTGGTGGACTTGGATCC  90
V  91.1% (246/270)  IGHV4-4*02   26   ................T.................................G...G..........A..AG.A.........G....G...  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  H  H  S  A  D  T  H  Y  N  P  S  L  K  S  R  V  
                    Query_2465   91   GCCAGCCCCCAGGGAAGGGGCTGGAGTGGATCGGAGAGATCCATCATAGTGCGGACACCCACTACAACCCGTCCCTCAAGAGTCGAGTCA  180
V  91.1% (246/270)  IGHV4-4*02   116  ...............................T..G..A...T.........G.AG....A..............................  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  I  S  V  D  N  S  K  N  Q  F  S  L  E  L  R  S  V  T  A  A  D  A  A  L  Y  Y  C  A  R  
                    Query_2465   181  CCATATCAGTAGACAACTCTAAGAACCAATTCTCCCTGGAGCTGAGGTCTGTGACCGCCGCGGACGCGGCCCTGTATTACTGTGCGAGAG  270
V  91.1% (246/270)  IGHV4-4*02   206  ................G..C........G.........A.......C..................A.....G..................  295
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  

                                      -----------CDR3-IMGT----------------->                                  
                                      V  H  C  G  S  G  G  C  F  Y  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2465   271  TTCATTGTGGAAGTGGTGGCTGTTTCTACTTTGACATCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
D  100.0% (8/8)     IGHD2-15*01  11   -----------........-----------------------------------------------------  18
J  95.7% (45/47)    IGHJ4*02     2    -------------------------..........TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_32718

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGGGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGGGGGTAGCAGTGGCTGGCTTGACTCC	ARGRGGSSGWLDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	247	223	21	3	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_2466   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  87
V  90.3% (223/247)  IGHV4-4*02   49   ..................GC.........T...TCC......A..AG........GG.......................G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  K 
                    Query_2466   88   GAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCAAG  177
V  90.3% (223/247)  IGHV4-4*02   139  .......................T......A................................G.......A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  G  G  S  S  G  W 
                    Query_2466   178  AATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGGGGGTAGCAGTGGCTGG  267
V  90.3% (223/247)  IGHV4-4*02   229  ..CC.GT..........G....GC..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-19*01  6    -----------------------------------------------------------------------------.............  18

                                      -------->                                
                                       L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_2466   268  CTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  308
J  95.0% (38/40)    IGHJ4*02     7    -......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_9301

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           10.3    116  
IGHJ5*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAGGTTTCGATA	GGGGG	G	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAGGTTTCGATAGGGGGGGGTTCGACCCC	ARDRGFDRGGFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2467   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A......A..............................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  Y  Y  S  G  S  I  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  M  P  K  N 
                    Query_2467   91   TGGATTGCGTATATCTATTACAGTGGGAGCATCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACATGCCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  .......G.......................C...C.....................................T.....C.T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  I  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  G  F  D  R  G  G  F 
                    Query_2467   181  CAGATCTCCCTGAAGTTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATAGAGGTTTCGATAGGGGGGGGTTC  270
V  95.1% (233/245)  IGHV4-59*01  229  ...T...........C................T................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -------------------------------------------------------------------------------.....------  22
J  95.6% (43/45)    IGHJ5*02     7    -------------------------------------------------------------------------------------.....  11

                                      ----->                                  
                                       D  P  W  G  *  G  T  L  V  T  V  S  S  
                    Query_2467   271  GACCCCTGGGGGTAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  95.6% (43/45)    IGHJ5*02     12   ...........CC...........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_9300

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            400     9e-114
IGHD6-19*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GCCAACCAACCT	TATAGCAATGCCTGGTA	TTGCCCCCGT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGGCCAACCAACCTTATAGCAATGCCTGGTATTGCCCCCGTCTACTTTGACGGC	AHRPTNLIAMPGIAPVYFDG	263	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	27	3	0	90
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	110	4	0	96.5
CDR3-IMGT (germline)	263	270	8	8	0	0	100
Total	N/A	N/A	270	263	7	0	97.4


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  T  T  N  G  V  G  V  G  W  I  R
                    Query_2468   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCACCACTAATGGAGTGGGCGTGGGCTGGATCCG  90
V  97.4% (263/270)  IGHV2-5*01   30   ...........................................................G.....G.........T..............  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T
                    Query_2468   91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCAC  180
V  97.4% (263/270)  IGHV2-5*01   120  ..........................................................................................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  T  K  D  T  S  K  N  Q  V  V  L  M  M  T  N  V  D  P  V  D  T  G  T  Y  Y  C  A  H  R
                    Query_2468   181  CATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTATGATGACCAACGTGGACCCTGTGGACACAGGCACATATTACTGTGCACACAG  270
V  97.4% (263/270)  IGHV2-5*01   210  ......................................CA.........A..................C.....................  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                      ------------------CDR3-IMGT------------------------>                                  
                                        P  T  N  L  I  A  M  P  G  I  A  P  V  Y  F  D  G  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_2468   271  GCCAACCAACCTTATAGCAATGCCTGGTATTGCCCCCGTCTACTTTGACGGCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  356
D  88.2% (15/17)    IGHD6-19*01  4    ------------.......G..G......---------------------------------------------------------  20
J  93.6% (44/47)    IGHJ4*02     2    ---------------------------------------..........TA..............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_9303

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           316     2e-88
IGHD1-26*01                                                                                           10.3    124  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCCAGGG	GTGGG	CGGACGGTCG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCAGGGGTGGGCGGACGGTCGCTACTTTGACTAC	ARLQGWADGRYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  E  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_2469   1    ACCCTGTCCCTCACCTGCGAAGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*08  49   ..................ACT...................G........................................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  S  Y  S  G  R  T  D  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_2469   91   TGGCTTGGGTATGTCTCTTATAGTGGGAGAACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCGAAGAAC  180
V  91.4% (223/244)  IGHV4-59*08  139  ...A........A...A...C........C...A..................................A..............C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  F  L  N  L  S  S  V  I  A  E  D  T  A  L  Y  Y  C  A  R  L  Q  G  W  A  D  G  R  Y 
                    Query_2469   181  CAATTCTTCCTGAATCTGAGCTCTGTGATCGCCGAAGACACGGCCCTCTATTATTGTGCGAGACTCCAGGGGTGGGCGGACGGTCGCTAC  270
V  91.4% (223/244)  IGHV4-59*08  229  ..G....C......G.............C.....C..........G.G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD1-26*01  7    -----------------------------------------------------------------------.....--------------  11
J  95.7% (45/47)    IGHJ4*02     2    --------------------------------------------------------------------------------------....  5

                                      -------->                                  
                                       F  D  Y  G  G  Q  G  A  L  V  T  V  S  S  
                    Query_2469   271  TTTGACTACGGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  313
J  95.7% (45/47)    IGHJ4*02     6    .........T...........A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_9305

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           347     7e-98
IGHD3-10*01                                                                                           12.2    33   
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGTAAAGCAATGCC	TATTAC	CCCGTGGATTT	GTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGTAAAGCAATGCCTATTACCCCGTGGATTTGTTCGACCCC	ARDR*SNAYYPVDLFDP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  P  F  S  S  Y  G  M  H  W  V  R  Q  S  P  G  K  G  L  
                    Query_2470   1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCCCTTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGTCTCCAGGCAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-33*01  47   ....................G..............A.C.................................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  D  D  G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2470   91   AGTGGGTGGCAGTGATATGGGATGATGGAAGTAATAAGTTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (236/250)  IGHV3-33*01  137  .............T......T................A.A..................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  N  D  T  A  V  Y  Y  C  A  R  D  R  *  S  N  A  Y  
                    Query_2470   181  AGAACACTCTGTATCTACAAATGAACAGCCTGAGAGCCAATGACACGGCGGTCTATTACTGTGCGAGAGATCGGTAAAGCAATGCCTATT  270
V  94.4% (236/250)  IGHV3-33*01  227  .......G........G.....................G.G........T..G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01  2    --------------------------------------------------------------------------------------....  5

                                      GT-------------------->                                  
                                      Y  P  V  D  L  F  D  P  G  G  Q  G  T  L  V  T  V  S  S  
                    Query_2470   271  ACCCCGTGGATTTGTTCGACCCCGGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (6/6)     IGHD3-10*01  6    ..-------------------------------------------------------  7
J  97.7% (43/44)    IGHJ5*02     8    -------------..........T.................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_9304

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD1-1*01                                                                                            18.0    0.59 
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCTGCAGTG	GGTACAACT	TTGGGAAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCTGCAGTGGGTACAACTTTGGGAATAACTGGTTCGCCCCG	ARDPTCSGYNFGNNWFAP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  H  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2471   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGTCATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G..........AG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  K  G  G  I  T  N  H  N  P  S  L  K  S  P  A  T  T  S  R  D  T  S  K  N 
                    Query_2471   91   TGGATTGGATATGTCTATAAGGGCGGGATCACCAACCACAACCCCTCCCTCAAGAGTCCAGCCACCACATCACGAGACACGTCCAAGAAC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G...A.....T.CA.T....G.......T.....................G..T.....T....GT................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       P  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  H  C  A  R  D  P  T  C  S  G  Y  N  F 
                    Query_2471   181  CCGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCTGACACGGCCATATATCACTGTGCGAGAGATCCTACCTGCAGTGGGTACAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  .A.................................G.........G.G...T.............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD1-1*01   1    -------------------------------------------------------------------------------.........--  9

                                      -------------------->                                  
                                       G  N  N  W  F  A  P  W  G  P  G  T  L  V  T  F  S  S  
                    Query_2471   271  GGGAATAACTGGTTCGCCCCGTGGGGCCCGGGAACCCTGGTCACCTTCTCCTCAG  325
J  91.8% (45/49)    IGHJ5*02     3    ------..........A...C.......A................G.........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_9307

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            329     3e-92
IGHD1-7*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TAAAAGACTACACA	AACTGGTACT	TCC	TTGCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGATATAAAAGACTACACAAACTGGTACTTCCTTGCCTAT	TRDIKDYTNWYFLAY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	252	10	8	2	0	80
Total	N/A	N/A	252	231	21	0	91.7


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  S  F  D  A  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2472  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTGATGCTTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  91.7% (231/252)  IGHV3-9*01  47   ....................................C........A............................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  I  S  W  T  G  G  S  I  G  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  A  
                    Query_2472  91   AGTGGGTCTCAGGCATTAGTTGGACTGGTGGTAGTATTGGCTATGCGGACTCTGTGCAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.7% (231/252)  IGHV3-9*01  137  .............T..........A.A.......C..A..................A.................................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                     K  S  L  L  F  L  E  M  R  S  L  R  P  E  D  T  A  L  Y  F  C  T  R  D  I  K  D  Y  T  N  
                    Query_2472  181  AGAGTCTCCTATTTCTGGAAATGAGAAGTCTGAGACCTGAGGACACGGCCTTGTATTTCTGTACAAGAGATATAAAAGACTACACAAACT  270
V  91.7% (231/252)  IGHV3-9*01  227  ...ACTC...G.A....C......AC.........G.....................A....G...A.....------------------  298
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  90.0% (9/10)     IGHD1-7*01  6    --------------------------------------------------------------------------------------....  9

                                     ---------------->                                  
                                     W  Y  F  L  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2472  271  GGTACTTCCTTGCCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  90.0% (9/10)     IGHD1-7*01  10   ..A...---------------------------------------------  15
J  95.2% (40/42)    IGHJ4*02    7    ---------...A...C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_9306

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           339     1e-95
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	N/A	AGCGAGGGCCTGCCTGGCACAC	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCGAGGGCCTGCCTGGCACACTGCTTTTGATATC	AKRGPAWHTAFDI	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	229	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2473   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTCGTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.0% (229/241)  IGHV4-59*08  49   ...........................................G..AC.......G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  N  S  G  N  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2473   91   TGGATTGGGTATATCTTTAACAGTGGGAACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.0% (229/241)  IGHV4-59*08  139  ................A.T.........G.......................A.....................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  R  G  P  A  W  H  T  A  F 
                    Query_2473   181  CAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTATATTATTGTGCGAAGCGAGGGCCTGCCTGGCACACTGCTTTT  270
V  95.0% (229/241)  IGHV4-59*08  229  ..............G....G...........................G.....C.......-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
J  100.0% (47/47)   IGHJ3*02     4    -----------------------------------------------------------------------------------.......  10

                                      ----->                                  
                                       D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2473   271  GATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  310
J  100.0% (47/47)   IGHJ3*02     11   ........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_240492

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           363     1e-102
IGHD5-18*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGC	TGGATACAACTATGGTTAC	CCTCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCTGGATACAACTATGGTTACCCTCCCTTTGACTAC	ARGAGYNYGYPPFDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	238	6	0	97.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2474   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.5% (238/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  F  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2474   91   TGGATTGGCTTTATCTATTACACTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGTGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.5% (238/244)  IGHV4-59*01  139  ........G.A...........G......C.............................A..............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  Y  N  Y  G  Y  P 
                    Query_2474   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGGCTGGATACAACTATGGTTACCCT  270
V  97.5% (238/244)  IGHV4-59*01  229  ................................T...............................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD5-18*01  2    --------------------------------------------------------------------........G..........---  20

                                      ----------->                                  
                                       P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2474   271  CCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (44/44)   IGHJ4*02     5    --............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_240493

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           386     2e-109
IGHD7-27*01                                                                                           12.2    36    
IGHJ6*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD7-27*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	CTGGGG	CCTCGGATTCCAATTTCCT	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGGGGCCTCGGATTCCAATTTCCTCTATTACCATGGAATGTACGTC	ATGASDSNFLYYHGMYV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	267	20	0	93


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  R  Y
                    Query_2475   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGGTA  90
V  93.0% (267/287)  IGHV1-69*01  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  G  I  I  T  A  F  G  T  T  E  Y  G  Q
                    Query_2475   91   TGCCATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCAGGGATCATCACTGCCTTTGGAACAACAGAGTACGGACA  180
V  93.0% (267/287)  IGHV1-69*01  96   ...T..............................................G..........C..AT......T...G..A.C....C...  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  A  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  E  D  T  A
                    Query_2475   181  GAAGTTCCAGGGCAGAGCGACGATTACCGCGGACGAATCAACGAGCACAGCCTATATGGAGCTGCGCAGTCTGAGATCTGAAGACACGGC  270
V  93.0% (267/287)  IGHV1-69*01  186  .................TC....................C..............C.........A....C...........G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        A  Y  Y  C  A  T  G  A  S  D  S  N  F  L  Y  Y  H  G  M  Y  V  W  G  Q  G  T  T  F  T  V
                    Query_2475   271  CGCGTATTACTGTGCGACTGGGGCCTCGGATTCCAATTTCCTCTATTACCATGGAATGTACGTCTGGGGCCAAGGGACCACTTTCACCGT  360
V  93.0% (267/287)  IGHV1-69*01  276  ..T..............-------------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                           
D  100.0% (6/6)     IGHD7-27*01  5    -----------------......-------------------------------------------------------------------  10
J  87.3% (48/55)    IGHJ6*02     8    ------------------------------------------...C...T.C..T...G......................GG.......  55

                                             
                                        S  S 
                    Query_2475   361  CTCCTCA  367
J  87.3% (48/55)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_80394

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           296     2e-82
IGHD2-15*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GATTAGTGATTACC	GTGGTAGC	CGCGGTTTGGTA	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGATTAGTGATTACCGTGGTAGCCGCGGTTTGGTAGACCTC	AKISDYRGSRGLVDL	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	218	29	0	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  T  G  F  A  F  S  S  F  D  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_2476   1    GGTCCCTGAGACTCTCCTGTGCTGCCACTGGATTCGCCTTTAGTAGTTTTGACATGGGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  88.3% (218/247)  IGHV3-23*01  47   ......................A...T........A.......C..C.A..C....A.C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  T  N  Y  R  G  D  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2476   91   AGTGGGTCTCACGTACTAATTACAGAGGTGACAACACATATTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  88.3% (218/247)  IGHV3-23*01  137  ...........GC..T..G.GGT..T....GT.G......C............................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  F  L  Q  M  E  S  L  R  V  E  D  T  A  L  Y  Y  C  A  K  I  S  D  Y  R  G  S  
                    Query_2476   181  AGAACACCCTGTTTCTGCAAATGGAGAGCCTGAGAGTCGAGGACACGGCCTTATACTACTGTGCGAAGATTAGTGATTACCGTGGTAGCC  270
V  88.3% (218/247)  IGHV3-23*01  227  .......G....A..........A.C..........C.............G....T...........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD2-15*01  15   ---------------------------------------------------------------------------------........-  22

                                      ---------------->                                
                                      R  G  L  V  D  L  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2476   271  GCGGTTTGGTAGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
J  97.4% (37/38)    IGHJ5*02     12   -----------....C.................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_240491

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           324     8e-91
IGHD6-13*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTGG	GCAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTGGGCAGCAGCTGACTGACTAC	ARDSGQQLTDY	276	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	275	147	112	2	33	76.2
CDR3-IMGT (germline)	276	283	8	8	0	0	100
Total	N/A	N/A	283	247	3	33	87.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2477   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.3% (247/283)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  H  I  Y  Y  A  D  S  V  K  G  R  F  T  Y  Y  A  D  S  V  
                    Query_2477   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAGTCACATATATTACGCAGACTCAGTGAAGGGCCGATTCACCTATTACGCAGACTCAGTGA  180
V  87.3% (247/283)  IGHV3-21*01  137  ................................T.......C.................--------------------------------  194
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K                                

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                      R  G  R  F  T  I  S  R  D  D  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  
                    Query_2477   181  GGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATT  270
V  87.3% (247/283)  IGHV3-21*01  195  -.........................A...............................................................  283
                                         G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-----------CDR3-IMGT----------->                                  
                                      Y  C  A  R  D  S  G  Q  Q  L  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2477   271  ACTGTGCGAGAGATTCTGGGCAGCAGCTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
V  87.3% (247/283)  IGHV3-21*01  284  .............-----------------------------------------------------------  296
                                      Y  C  A  R                                                              
D  100.0% (10/10)   IGHD6-13*01  8    -------------------..........-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_80392

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GGTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGGTCAAGAC	ARGHSYGSGSYYGQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2478   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.2% (243/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  T  S 
                    Query_2478   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTATCATATCAGTGGACACGTCT  180
V  97.2% (243/250)  IGHV4-31*03  139  ..................................G...................................C.........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  S  Y  G  S  G 
                    Query_2478   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  97.2% (243/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  G  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2478   271  AGTTATTATGGTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_240497

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           392     2e-111
IGHD2-15*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGC	ATATTGTAGTGATAGTAACTGCTAC	CCGAGGGAGCG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGCATATTGTAGTGATAGTAACTGCTACCCGAGGGAGCGCTACTTTGACCAC	ARLAYCSDSNCYPRERYFDH	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  A  G  E  S  L  R  I  S  C  K  V  S  G  Y  K  F  A  T  Y
                    Query_2479   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGGCGGGGGAGTCTCTGAGGATCTCCTGTAAGGTGTCTGGATACAAGTTTGCCACCTA  90
V  93.4% (270/289)  IGHV5-51*03  6    ..................................C...............A..............GT..........GC...A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  M  Y  P  S  D  S  D  A  R  Y  S  P
                    Query_2479   91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATGTATCCTAGTGACTCTGATGCCAGATACAGCCC  180
V  93.4% (270/289)  IGHV5-51*03  96   C...................................................A....C......G...........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  G  L  E  A  S  D  T  A
                    Query_2479   181  GTCCTTTGAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGTGGCCTGGAGGCCTCGGACACCGC  270
V  93.4% (270/289)  IGHV5-51*03  186  ......CC................C.........................................CA.....A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  Y  C  A  R  L  A  Y  C  S  D  S  N  C  Y  P  R  E  R  Y  F  D  H  W  G  Q  G  T  L
                    Query_2479   271  CATGTATTACTGTGCGAGACTGGCATATTGTAGTGATAGTAACTGCTACCCGAGGGAGCGCTACTTTGACCACTGGGGCCAGGGAACCCT  360
V  93.4% (270/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  88.0% (22/25)    IGHD2-15*01  4    ------------------------...........G.G...G.......-----------------------------------------  28
J  95.7% (45/47)    IGHJ4*02     2    ------------------------------------------------------------..........T...................  31

                                                       
                                        V  T  V  S  S  
                    Query_2479   361  GGTCACCGTCTCGTCAG  377
J  95.7% (45/47)    IGHJ4*02     32   ............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_80390

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           350     9e-99
IGHD3-16*02                                                                                           31.5    5e-05
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCC	ATGATCACGTCTGGGGGAGTCATCG	AGAGGT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATATCCATGATCACGTCTGGGGGAGTCATCGAGAGGTCTACTACGGTATGGACGTC	AKDIHDHVWGSHREVYYGMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  I  Y  G  M  H  W  A  R  Q  A  P  G  K  G  L  
                    Query_2480   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAATATCTATGGCATGCACTGGGCCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-30*18  47   .....................................C....G..G.................T..........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  E  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2480   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTAATGAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (237/250)  IGHV3-30*18  137  ...................................A.................................................TT...  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  S  V  H  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  I  H  D  H  V  W  
                    Query_2480   181  AAAACTCGGTGCATCTGGAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTTTATTACTGTGCGAAAGATATCCATGATCACGTCTGGG  270
V  94.8% (237/250)  IGHV3-30*18  227  .G...A..C..T.....C..................................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.0% (22/25)    IGHD3-16*02  6    ---------------------------------------------------------------------------.....T....T....  20

                                      DR3-IMGT-------------------------->                              
                                      G  S  H  R  E  V  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_2480   271  GGAGTCATCGAGAGGTCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  335
D  88.0% (22/25)    IGHD3-16*02  21   .....T....-------------------------------------------------------  30
J  100.0% (49/49)   IGHJ6*02     11   ----------------.................................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_240495

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           310     1e-86
IGHD5-12*01                                                                                           12.2    30   
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCC	GTGGAT	TAAGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCGTGGATTAAGCTTC	ATRGLSF	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  D  M  N  W  L  R  Q  A  P  G  K  G  P  
                    Query_2481   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACTTTCAGTAATTACGACATGAACTGGCTCCGCCAGGCTCCTGGGAAGGGGCCGG  90
V  90.2% (222/246)  IGHV3-48*03  47   .....................C...............C.......G...T..A.........G.............A..........T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  D  I  T  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_2481   91   AGTGGGTCTCATCCATTAGTAGTCGTGGAGATATCACATACTACGCGGACTCAGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.2% (222/246)  IGHV3-48*03  137  .......T....A..........A....TAG..C..T.........A.....T...A.................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  S  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  T  R  G  L  S  F  W  G  
                    Query_2481   181  AGAACTCACTGTCCCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTCTTTATTACTGTGCGACCCGTGGATTAAGCTTCTGGGGCC  270
V  90.2% (222/246)  IGHV3-48*03  227  ............AT......................C...G.........G...............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD5-12*01  1    ---------------------------------------------------------------------......---------------  6
J  94.3% (33/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  A  Q  V  T  V  S  S  
                    Query_2481   271  AGGGAGCCCAGGTCACCGTCTCCTCAG  297
J  94.3% (33/35)    IGHJ4*02     22   .....A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_77606

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           416     2e-118
IGHD7-27*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	TCTGGGA	AACTGGGG	TAGGA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATCTGGGAAACTGGGGTAGGAGACTAC	AIWETGVGDY	292	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	72	3	0	96
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	110	4	0	96.5
CDR3-IMGT (germline)	292	295	4	4	0	0	100
Total	N/A	N/A	292	279	13	0	95.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  R  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  R 
                    Query_2482   4    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGG  93
V  95.5% (279/292)  IGHV1-69*01  1    ...G...................G.............A...................................................C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  G  I  I  P  L  F  R  T  P  N  Y 
                    Query_2482   94   AGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGAGGGATCATCCCTCTCTTTCGGACACCAAACTAC  183
V  95.5% (279/292)  IGHV1-69*01  91   ...................................................A.................A.....G.T...G........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  D  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  Q  L  S  S  L  R  S  E  D 
                    Query_2482   184  GCACAGAAGTTCCAGGACAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGCAACTGAGCAGCCTGAGATCTGAGGAC  273
V  95.5% (279/292)  IGHV1-69*01  181  ................G..............................................G.G........................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------CDR3-IMGT--------->                                  
                                       T  A  V  Y  Y  C  A  I  W  E  T  G  V  G  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_2482   274  ACGGCCGTATATTACTGTGCGATCTGGGAAACTGGGGTAGGAGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  355
V  95.5% (279/292)  IGHV1-69*01  271  ........G.............------------------------------------------------------------  292
                                       T  A  V  Y  Y  C  A                                                              
D  100.0% (8/8)     IGHD7-27*01  3    -----------------------------........---------------------------------------------  10
J  97.5% (39/40)    IGHJ4*02     9    ------------------------------------------...........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_158824

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_2483   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG....T..............A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2483   91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.4% (228/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_2483   181  CAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  ...............C...G...........................G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_2483   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_240499

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           377     1e-106
IGHD6-19*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTCGCGCACAA	GGTATCCCAGTGGC	CCCA	TTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTCGCGCACAAGGTATCCCAGTGGCCCCATTGAATAC	ARGSRTRYPSGPIEY	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	67	4	0	94.4
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	19	5	0	79.2
FR3-IMGT	177	290	114	105	9	0	92.1
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	291	266	25	0	91.4


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  E  A  S  G  Y  S  F  T  T  
                    Query_2484   7    TGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAACCTGGGGCCTCAGTGAAGGTTTCTTGCGAGGCTTCTGGATACTCCTTCACCACTT  96
V  91.4% (266/291)  IGHV1-46*01  5    ..................................G.......................C...A....A.........A.........GC.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  Y  I  Q  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  N  P  S  D  G  D  T  N  Y  A  
                    Query_2484   97   ACTATATACAGTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGAGTAATCAATCCTAGTGATGGAGACACAAACTACGCAC  186
V  91.4% (266/291)  IGHV1-46*01  95   .......G..C.......................A..................A.......C.......G...TAG.....G........  184
                                      Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  R  V  T  M  T  S  D  S  S  A  S  T  F  Y  M  E  L  S  S  L  R  S  E  D  T  
                    Query_2484   187  AGAAATTCCAGGGCAGAGTCACCATGACCAGCGACTCGTCCGCGAGTACATTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGG  276
V  91.4% (266/291)  IGHV1-46*01  185  ....G..........................G...A.....A....C...G.......................................  274
                                      Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-----------------CDR3-IMGT----------------->                               
                                      A  V  Y  H  C  A  R  G  S  R  T  R  Y  P  S  G  P  I  E  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_2484   277  CCGTCTATCACTGTGCGAGAGGTTCGCGCACAAGGTATCCCAGTGGCCCCATTGAATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  366
V  91.4% (266/291)  IGHV1-46*01  275  ....G...T............---------------------------------------------------------------------  295
                                      A  V  Y  Y  C  A  R                                                                       
D  85.7% (12/14)    IGHD6-19*01  2    ---------------------------------.....AG.......-------------------------------------------  15
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------....C..................................  45

                                         
                                      S  
                    Query_2484   367  CAG  369
J  97.6% (41/42)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_80398

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           343     2e-96
IGHD2-21*01                                                                                           19.9    0.16 
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-21*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CCGCGAGGGGG	TGTGGTGGTG	GATGTGGA	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCCGCGAGGGGGTGTGGTGGTGGATGTGGATGGTTCGACACC	AKAARGCGGGCGWFDT	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  N  I  Y  D  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2485   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACGTTCAATATCTATGACATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-30*18  47   ........................C............C....G..G.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  M  I  S  N  D  G  S  Y  K  N  Y  A  D  S  V  K  G  R  S  T  I  S  R  D  N  S  
                    Query_2485   91   AGTGGGTGGCAATGATATCAAATGATGGAAGTTACAAAAACTATGCAGACTCCGTCAAGGGCCGATCCACCATCTCCAGAGACAATTCCA  180
V  94.0% (234/249)  IGHV3-30*18  137  ...........G.T......T...........A.T...T................G..........T.......................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  S  C  A  K  A  A  R  G  C  G  G  
                    Query_2485   181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTCCTGTGCGAAAGCCGCGAGGGGGTGTGGTGGTG  270
V  94.0% (234/249)  IGHV3-30*18  227  ..............C..........................................A...........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD2-21*01  8    --------------------------------------------------------------------------------..........  17

                                      T------------------>                                  
                                      G  C  G  W  F  D  T  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_2485   271  GATGTGGATGGTTCGACACCTGGGGCCAGGGAAGTCTGGTCACCGTCTCCTCAG  324
J  93.5% (43/46)    IGHJ5*02     6    --------.........C...............CC...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_80399

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2486   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  98.4% (239/243)  IGHV4-59*01  49   ......................................................................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2486   91   TGGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  .........T................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_2486   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (18/20)    IGHD5-18*01  1    ----------------------------------------------------------------..........C.....T...------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2486   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_168459

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           344     6e-97
IGHD2-21*02                                                                                           12.2    32   
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCCCCAGGAGGATTAG	GGTGAC	CACA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCCCCAGGAGGATTAGGGTGACCACATTTGACTAC	ARSPRRIRVTTFDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  I  V  S  G  A  S  V  S  S  G  N  Y  C  W  S  W  I  R  Q  P  P  G  R  G  
                    Query_2487   4    CCCTGAGACTCTCCTGCATTGTCTCTGGTGCCTCCGTCAGCAGTGGTAATTACTGCTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGAC  93
V  94.4% (234/248)  IGHV4-61*01  50   .....TCC...A......C...........G.................G.....A.............................A.....  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  F  Y  H  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  
                    Query_2487   94   TGGAGTGGATTGGGTATTTCTATCACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCA  183
V  94.4% (234/248)  IGHV4-61*01  140  .................A.....T..............A..................................A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  S  P  R  R  I  R  V  
                    Query_2487   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCATGTATTACTGTGCGAGATCCCCCAGGAGGATTAGGGTGA  273
V  94.4% (234/248)  IGHV4-61*01  230  ..................................................G.................----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*02  14   -------------------------------------------------------------------------------------.....  18

                                      ------------->                                  
                                      T  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2487   274  CCACATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (6/6)     IGHD2-21*02  19   .-----------------------------------------------  19
J  100.0% (43/43)   IGHJ4*02     6    -----...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_63639

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            357     1e-100
IGHD2-15*01                                                                                           14.1    8.6   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATATGC	GGATATT	CTGTCCTTAGGTTTTAGGCGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATATGCGGATATTCTGTCCTTAGGTTTTAGGCGTTACTACTTTGACTAC	AKYADILSLGFRRYYFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	237	9	0	96.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  P  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2488   1    GGTCCCTGAGACTCCCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.3% (237/246)  IGHV3-7*01   47   ..............T...............................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  Y  E  K  Y  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_2488   91   AGTGGGTGGCCAACATAAAGGAAGATGGATATGAGAAATACTATGTGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.3% (237/246)  IGHV3-7*01   137  ....................C........AG..........................A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  I  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  Y  A  D  I  L  S  L  
                    Query_2488   181  AGAACTCACTGTATCTGCAAATCAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTATTGTGCGAAATATGCGGATATTCTGTCCTTAG  270
V  96.3% (237/246)  IGHV3-7*01   227  ......................G.............C.....................C.......------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-15*01  2    -------------------------------------------------------------------------.......----------  8

                                      IMGT--------------------->                                  
                                      G  F  R  R  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2488   271  GTTTTAGGCGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
J  100.0% (48/48)   IGHJ4*02     1    ------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_66575

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           330     1e-92
IGHD6-6*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	TC	ATAGCAGTTCGT	ACGACGA	TGAGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACTCATAGCAGTTCGTACGACGATGAGTAC	TTHSSSYDDEY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	232	21	0	91.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  T  W  L  S  W  V  R  Q  D  P  E  K  G  L  
                    Query_2489   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACACCTGGCTGAGCTGGGTCCGCCAGGATCCAGAGAAGGGTCTGG  90
V  91.7% (232/253)  IGHV3-15*01  47   .......T.......................................G.....A..................C.....G......G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      A  W  V  G  R  I  K  S  E  T  H  G  G  T  T  D  Y  P  A  P  V  K  G  R  F  T  V  S  R  D  
                    Query_2489   91   CGTGGGTTGGCCGTATTAAAAGCGAGACTCATGGTGGGACAACAGACTACCCTGCACCCGTGAAAGGCAGATTCACCGTCTCTAGAGATG  180
V  91.7% (232/253)  IGHV3-15*01  137  A......................A.A...G....................G..........................A....A.......  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  D  T  L  Y  L  H  M  N  D  L  K  S  E  D  T  A  V  Y  F  C  T  T  H  S  S  S  Y  
                    Query_2489   181  ATTCAAAAGACACACTGTATCTGCACATGAACGACCTGAAAAGCGAGGACACAGCCGTGTATTTCTGCACCACTCATAGCAGTTCGTACG  270
V  91.7% (232/253)  IGHV3-15*01  227  ........A....G...........A......AG........C....................A...T.....-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  91.7% (11/12)    IGHD6-6*01   5    ---------------------------------------------------------------------------.......C....---  16

                                      ---------->                                  
                                      D  D  E  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_2489   271  ACGATGAGTACTGGGGTCAGGGAACCCGGGTCACCGTCTCCTCAG  315
J  92.7% (38/41)    IGHJ4*02     8    ----...C........C..........T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_81117

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           410     1e-116
IGHD2-15*01                                                                                           21.8    0.048 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGTTTTTC	GGATATTGTAG	GGATGGAAATTGTTACGCACTGGAGTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGTTTTTCGGATATTGTAGGGATGGAAATTGTTACGCACTGGAGTAT	ARDRFFGYCRDGNCYALEY	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	279	17	0	94.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  T  F  T 
                    Query_2490   1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACCTCTGGTTACACCTTTACC  90
V  94.3% (279/296)  IGHV1-18*04  1    .....T............................A..................................G.T..................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  L  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  T  Y  N  G  N  T  N  Y 
                    Query_2490   91   AGTTACGGTCTCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCGGCACTTACAATGGGAACACAAACTAT  180
V  94.3% (279/296)  IGHV1-18*04  91   ..C......A...G.................................................A..G..........T............  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  L  E  L  R  S  L  R  S  D  D 
                    Query_2490   181  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCACAGATACATCCACGAGAACAGCGTACTTGGAGCTGAGGAGCCTGAGATCTGACGAC  270
V  94.3% (279/296)  IGHV1-18*04  181  .........C............................C...........C.....C...A.............................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  L  Y  Y  C  A  R  D  R  F  F  G  Y  C  R  D  G  N  C  Y  A  L  E  Y  W  G  Q  G  T 
                    Query_2490   271  ACGGCCCTATATTACTGTGCGAGAGATAGGTTTTTCGGATATTGTAGGGATGGAAATTGTTACGCACTGGAGTATTGGGGCCAGGGAACC  360
V  94.3% (279/296)  IGHV1-18*04  271  ......G.G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (11/11)   IGHD2-15*01  2    ------------------------------------...........-------------------------------------------  12
J  100.0% (34/34)   IGHJ4*02     15   ---------------------------------------------------------------------------...............  29

                                                         
                                       L  V  T  V  S  S  
                    Query_2490   361  CTGGTCACCGTCTCCTCAG  379
J  100.0% (34/34)   IGHJ4*02     30   ...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_12058

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           308     4e-86
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	G	GGCCACGATTA	TGGTGACAACGCATTTGCT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGCCACGATTATGGTGACAACGCATTTGCTTAC	AKGHDYGDNAFAY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	222	25	0	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2491   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACATTTAGTACCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.9% (222/247)  IGHV3-23*01  47   .....................................C.....C.G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  N  I  G  G  N  G  G  N  R  V  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_2491   91   AGTGGGTCTCAAATATTGGCGGTAATGGTGGTAATAGAGTCTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  89.9% (222/247)  IGHV3-23*01  137  ...........GC....A.T....G........GC.C.TA...............................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  K  T  L  Y  L  Q  M  D  N  L  R  G  E  D  T  A  I  Y  Y  C  A  K  G  H  D  Y  G  D  N  
                    Query_2491   181  AGAAGACACTCTATCTGCAAATGGATAACCTAAGAGGCGAGGACACGGCCATTTATTACTGTGCGAAGGGCCACGATTATGGTGACAACG  270
V  89.9% (222/247)  IGHV3-23*01  227  ....C..G..G............A.C.G...G....C.............G.A..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.9% (10/11)    IGHD5-12*01  12   --------------------------------------------------------------------...T.......-----------  22

                                      ---------->                                  
                                      A  F  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2491   271  CATTTGCTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (37/37)   IGHJ4*02     12   --------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_12059

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           327     8e-92
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	GTGGAGC	TTGGGGG	GCCTAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTGGAGCTTGGGGGGCCTACGACTAC	GGAWGAYDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  A  M  A  W  L  R  Q  A  P  G  K  G  L  
                    Query_2492   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCACCTATGCCATGGCCTGGCTCCGCCAGGCTCCAGGGAAGGGGCTAC  90
V  93.0% (226/243)  IGHV3-23*01  47   ..........................................G..G..........AG....G.........................GG  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  D  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2492   91   AATGGGTCTCATCTATTAGTGATAGTGGAGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.0% (226/243)  IGHV3-23*01  137  .G.........G.........G......T.............................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      N  N  T  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  G  G  A  W  G  A  Y  D  Y  
                    Query_2492   181  ACAACACACTGTCTCTGCAAATGAATAGCCTGAGAGCCGAAGACACGGCCGTATATTATTGTGGTGGAGCTTGGGGGGCCTACGACTACT  270
V  93.0% (226/243)  IGHV3-23*01  227  .G.....G....A............C..............G.................C....---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (7/7)     IGHD3-16*01  16   ----------------------------------------------------------------------.......-------------  22
J  100.0% (38/38)   IGHJ4*02     9    -----------------------------------------------------------------------------------.......  15

                                                                     
                                      W  G  Q  G  T  L  V  T  V  S  S
                    Query_2492   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTC  301
J  100.0% (38/38)   IGHJ4*02     16   ...............................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_12056

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            325     3e-91
IGHD6-13*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACCTGGTACTCGGGGTTTTGACTAC	ARHLGTPGTRGFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	22	2	3	81.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	246	229	14	3	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_2493   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  87
V  93.1% (229/246)  IGHV4-4*02   49   ...............................G.....T........GTA.......................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  S  Y  H  S  G  R  T  N  Y  N  A  S  F  Q  S  R  V  T  I  S  V  D  T  S  K 
                    Query_2493   88   GAGTGGATTGGGGAATCCTATCATAGTGGGCGCACCAACTACAACGCGTCCTTCCAGAGTCGAGTCACCATATCAGTAGACACGTCCAAG  177
V  93.1% (229/246)  IGHV4-4*02   139  ...............AT.............A..............C.....C..A...........................A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  P  G  T  R 
                    Query_2493   178  AATCAATTCTCCCTGAATCTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACCTGGTACTCGG  267
V  93.1% (229/246)  IGHV4-4*02   229  ..C..G...........G....G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2493   268  GGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (43/43)   IGHJ4*02     6    ---...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_12057

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     3e-91
IGHD2-21*01                                                                                           12.2    33   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	T	GCATACTGT	AATATCATCAACTGCTCCCCGCGGGAAGGTG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATGCATACTGTAATATCATCAACTGCTCCCCGCGGGAAGGTGTTGACTTC	AKDAYCNIINCSPREGVDF	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  Y  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_2494   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTTAGCTACTATGCCATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-23*01  47   ....................................CC......AG...........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  D  G  N  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_2494   91   AGTGGGTCTCAAGTATTAGTGGCAGTGATGGGAACACATATTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  91.6% (229/250)  IGHV3-23*01  137  ...........GC.........T....G...T.G......C..............................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  M  Y  H  C  A  K  D  A  Y  C  N  I  I  
                    Query_2494   181  AGAACACGCTGTATCTGCAGATGAATAGCCTGAGAGTCGAGGACACGGCCATGTATCACTGTGCGAAGGATGCATACTGTAATATCATCA  270
V  91.6% (229/250)  IGHV3-23*01  227  ...................A.....C..........C.............G.A...T..........A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.9% (8/9)      IGHD2-21*01  2    -----------------------------------------------------------------------.....T...----------  10

                                      -IMGT----------------------->                                  
                                      N  C  S  P  R  E  G  V  D  F  W  G  Q  G  T  P  V  P  V  S  S  
                    Query_2494   271  ACTGCTCCCCGCGGGAAGGTGTTGACTTCTGGGGCCAGGGAACCCCGGTCCCCGTCTCCTCAG  333
J  92.9% (39/42)    IGHJ4*02     7    ---------------------......A.................T....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_12054

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           445     2e-127
IGHD6-6*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	GTATAGCAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTATAGCAGCTCGTCCTTGGTCTGACTAC	ARGIAARPWSDY	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	73	1	0	98.6
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	114	0	0	100
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	289	4	0	98.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_2495   4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  93
V  98.6% (289/293)  IGHV5-51*03  2    ..G.......................................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  F  W  L  G  W  V  R  Q  M  P  R  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_2495   94   GCTTCTGGCTCGGCTGGGTGCGCCAGATGCCCAGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  183
V  98.6% (289/293)  IGHV5-51*03  92   ...A....A.......................G.........................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_2495   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  98.6% (289/293)  IGHV5-51*03  182  ..........................................................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  M  Y  Y  C  A  R  G  I  A  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2495   274  CCGCCATGTATTACTGTGCGAGAGGTATAGCAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  98.6% (289/293)  IGHV5-51*03  272  .......................----------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                 
D  100.0% (16/16)   IGHD6-6*01   3    ------------------------................-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_276605

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           321     7e-90
IGHD2-2*01                                                                                            12.2    33   
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACTTTGACTTC	ARVSTSAYYFDF	261	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	20	4	0	83.3
FR2-IMGT	75	125	51	44	7	0	86.3
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	100	14	0	87.7
CDR3-IMGT (germline)	261	267	7	6	1	0	85.7
Total	N/A	N/A	267	236	31	0	88.4


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  
                    Query_2496   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGAC  90
V  88.4% (236/267)  IGHV4-59*01  26   ................T.......................................T........A.....T.C.........A....G.  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  
                    Query_2496   91   AACCCCCAGGAAAGGGACTGGAGTGGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCA  180
V  88.4% (236/267)  IGHV4-59*01  116  .G........G...................GGT....C...........G.G..C...C................A..G...........  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      M  S  F  D  T  S  K  R  Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  
                    Query_2496   181  TGTCCTTTGACACGTCCAAGAGGCAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCA  270
V  88.4% (236/267)  IGHV4-59*01  206  .A..AG.A.............AC.............A....AGC..........................G............A...---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      ----CDR3-IMGT------------>                                
                                      S  T  S  A  Y  Y  F  D  F  W  G  R  G  T  L  V  V  V  S  S
                    Query_2496   271  GCACCAGCGCATACTACTTTGACTTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  328
D  100.0% (6/6)     IGHD2-2*01   17   --......--------------------------------------------------  22
J  91.3% (42/46)    IGHJ4*02     1    ------------............A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_12052

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           336     1e-94
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACACA	TGTCACCAATA	ACTATGGTTCGGGGAG	GCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACATGTCACCAATAACTATGGTTCGGGGAGGCCCTTTGACGAC	ATHVTNNYGSGRPFDD	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	233	18	0	92.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  P  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_2497   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTCCTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  92.8% (233/251)  IGHV4-39*01  49   ................................................AG...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  R  G  N  T  Q  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_2497   91   CTGGAGTGGATTGGGAGTATCTATTATCGTGGGAACACCCAGTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  92.8% (233/251)  IGHV4-39*01  139  ...........................A......G....T.C................................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       G  N  Q  F  S  L  T  L  N  F  V  T  A  A  D  T  A  M  Y  Y  C  A  T  H  V  T  N  N  Y  G 
                    Query_2497   181  GGGAATCAGTTCTCCCTGACACTGAATTTTGTGACCGCCGCAGACACGGCTATGTATTACTGTGCGACACATGTCACCAATAACTATGGT  270
V  92.8% (233/251)  IGHV4-39*01  229  AA...C.............AG....GC.C......................G...............G...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (16/16)   IGHD3-10*01  6    ----------------------------------------------------------------------------------........  13

                                      GT------------------>                                  
                                       S  G  R  P  F  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2497   271  TCGGGGAGGCCCTTTGACGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  100.0% (16/16)   IGHD3-10*01  14   ........-----------------------------------------------  21
J  97.7% (43/44)    IGHJ4*02     5    -----------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_276603

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*02                                                                                            394     7e-112
IGHD3-9*01                                                                                            27.6    8e-04 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*02	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TTTTC	TTACGATATTTTGTCTG	CCAACACA	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTTTTCTTACGATATTTTGTCTGCCAACACAATGGACGTC	AFSYDILSANTMDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	269	17	0	94.1


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  L  T  G  Y
                    Query_2498  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTAAGGCTTCTGGATACAGCCTCACCGGCTA  90
V  94.1% (269/286)  IGHV1-2*02  6    ..................G.........................................C................C.T..........  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       S  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  V  N  S  G  A  T  N  Y  A  Q
                    Query_2498  91   CTCTGTGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATTAATGTTAACAGTGGCGCCACAAATTATGCACA  180
V  94.1% (269/286)  IGHV1-2*02  96   ..A.A....................................................C..CCC.........T.G......C........  185
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  Q  G  G  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  T  S  D  D  T  A
                    Query_2498  181  GAAGTTTCAGGGCGGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCGTACATGGAGCTGAGCAGGCTGACATCTGACGACACGGC  270
V  94.1% (269/286)  IGHV1-2*02  186  .............A.....................................C......................G...............  275
                                       K  F  Q  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                     ------------><----------------CDR3-IMGT--------------->                                 
                                       V  Y  Y  C  A  F  S  Y  D  I  L  S  A  N  T  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2498  271  CGTCTATTACTGTGCGTTTTCTTACGATATTTTGTCTGCCAACACAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  358
V  94.1% (269/286)  IGHV1-2*02  276  ...G............------------------------------------------------------------------------  291
                                       V  Y  Y  C  A                                                                         
D  94.1% (16/17)    IGHD3-9*01  4    ---------------------.............A...--------------------------------------------------  20
J  100.0% (42/42)   IGHJ6*02    21   ----------------------------------------------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_334065

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     1e-95
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	N/A	TCCTTGCCCCCGAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCCTTGCCCCCGACCTAC	ASLPPTY	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  T  T  Q  T  M  K  W  V  R  Q  A  P  G  K  G  L  
                    Query_2499   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCACTACCCAAACCATGAAGTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  94.3% (231/245)  IGHV3-21*01  47   ....................................C.....G..G.T.T.G......C.................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  T  S  S  S  T  Y  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2499   91   AGTGGGTCGCATCCATTACTAGTAGTAGTACTTACACATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.3% (231/245)  IGHV3-21*01  137  ........T.........G...........G.....T.....................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  Y  L  Q  M  T  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  L  P  P  T  Y  W  G  
                    Query_2499   181  AGAACTCACTGTATCTGCAAATGACCAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGTCCTTGCCCCCGACCTACTGGGGCC  270
V  94.3% (231/245)  IGHV3-21*01  227  ........................A...........................G............-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  97.4% (37/38)    IGHJ4*02     11   -------------------------------------------------------------------------------...........  21

                                                                 
                                      Q  G  T  L  V  P  V  S  S  
                    Query_2499   271  AGGGAACCCTGGTCCCCGTCTCCTCAG  297
J  97.4% (37/38)    IGHJ4*02     22   ..............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_276601

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            414     5e-118
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CACA	TACTATCCTTCGGGGAGTT	N/A	TACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATACTATCCTTCGGGGAGTTTACCACGGTATGGACGTC	ARAHTILRGVYHGMDV	273	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	30	0	0	100
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	24	3	0	88.9
FR3-IMGT	159	272	114	112	2	0	98.2
CDR3-IMGT (germline)	273	279	7	6	1	0	85.7
Total	N/A	N/A	279	272	7	0	97.5


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  M  S  G  D  S  V  S  S  N  S  A  A  W  N  W  
                    Query_2500   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATGTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGA  90
V  97.5% (272/279)  IGHV6-1*01   26   ..............................................C...........................................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  R  W  Y  T  D  Y  A  V  S  V  K  
                    Query_2500   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCGAGGTGGTATACTGATTATGCAGTCTCTGTGAAAA  180
V  97.5% (272/279)  IGHV6-1*01   116  .......................................................C.A........A............A..........  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_2500   181  GTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTCTATTACT  270
V  97.5% (272/279)  IGHV6-1*01   206  ..................................................................................G.......  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-------------------CDR3-IMGT------------------>                                 
                                      C  A  R  A  H  T  I  L  R  G  V  Y  H  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2500   271  GTGCGAGAGCACATACTATCCTTCGGGGAGTTTACCACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  353
V  97.5% (272/279)  IGHV6-1*01   296  ....A....--------------------------------------------------------------------------  304
                                      C  A  R                                                                            
D  89.5% (17/19)    IGHD3-10*01  5    -------------......GG...........---------------------------------------------------  23
J  98.0% (50/51)    IGHJ6*02     12   --------------------------------...T...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_168929

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         313     2e-87
IGHD4-17*01                                                                                           31.5    6e-05
IGHJ2*01                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GGTCGGACTCCGAGCTAAG	TGACTACGGTGACTAC	ATAGTCTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGTCGGACTCCGAGCTAAGTGACTACGGTGACTACATAGTCTTCTGGTACTTCGATGTC	ARGSDSELSDYGDYIVFWYFDV	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  A  S  G  S  I  S  S  G  S  Y  Y  W  S  W  I  R  Q  S  P  G  E  G 
                    Query_2501     1    ACCCTGTCCCTCACCTGCGCTGTCGCCAGTGGCTCCATCAGCAGCGGTAGTTACTACTGGAGTTGGATCCGCCAGTCCCCAGGGGAGGGC  90
V  90.0% (225/250)  IGHV4-30-4*01  49   ..................A.....T.TG................T...GA.........................C........A.....  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  D  Y  S  G  N  T  Y  Y  N  P  S  L  K  S  R  L  S  I  S  R  D  S  S 
                    Query_2501     91   CTGGAGTGGATTGGCTACATCGATTACAGTGGGAACACCTACTACAATCCGTCCCTCAAGAGTCGTCTTTCCATATCACGAGACTCGTCC  180
V  90.0% (225/250)  IGHV4-30-4*01  139  ..............G......T............G............C.................AG..A........GT....A.....  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------------
                                         K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  D  S  E  L  S 
                    Query_2501     181  AAGAACCAATTCTCCCTAAAGTTGCGCTCTGTGACTGCCGCGGACACGGCCGTGTATTATTGTGCCAGAGGGTCGGACTCCGAGCTAAGT  270
V  90.0% (225/250)  IGHV4-30-4*01  229  ........G........G...C..A................A.................C..........--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (16/16)   IGHD4-17*01    1    -----------------------------------------------------------------------------------------.  1

                                        --CDR3-IMGT--------------------------->                                  
                                         D  Y  G  D  Y  I  V  F  W  Y  F  D  V  W  G  R  G  T  P  V  T  V  S  S  
                    Query_2501     271  GACTACGGTGACTACATAGTCTTCTGGTACTTCGATGTCTGGGGCCGTGGCACCCCGGTCACTGTCTCCTCAG  343
D  100.0% (16/16)   IGHD4-17*01    2    ...............----------------------------------------------------------  16
J  96.0% (48/50)    IGHJ2*01       4    -----------------------.............C..................T.................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_287099

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           316     2e-88
IGHD3-10*01                                                                                           14.1    8.1  
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AATGCCA	TTCGGGG	G	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGAAATGCCATTCGGGGGTGCCTTTGATATA	VKEMPFGGAFDI	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  V  F  D  S  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2502   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCGTCTTCGATAGCTATTCTATGCATTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.4% (226/250)  IGHV3-64*05  47   ...................................AC....AG.......G.......C...............................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  V  I  S  S  N  G  E  S  T  F  Y  A  D  S  V  T  G  R  F  T  M  S  R  D  N  S  
                    Query_2502   91   AATTTGTATCAGTTATTAGTAGTAATGGAGAGAGTACATTTTACGCAGACTCAGTGACGGGCAGATTCACCATGTCCAGAGACAATTCCA  180
V  90.4% (226/250)  IGHV3-64*05  137  ...A...T....C...............G.GT..C....AC................A...............C................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  K  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  E  M  P  F  G  G  A  
                    Query_2502   181  AGAACAAACTGTATCTTCAAATGAGCAGTCTGAGACCTGAAGACACCGCTGTGTATTATTGTGTGAAAGAAATGCCATTCGGGGGTGCCT  270
V  90.4% (226/250)  IGHV3-64*05  227  ......CG......G....................G....G.....G...........C...........--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (7/7)     IGHD3-10*01  13   -----------------------------------------------------------------------------.......------  19
J  95.7% (45/47)    IGHJ3*02     4    -------------------------------------------------------------------------------------...T.  8

                                      ------->                                  
                                      F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2502   271  TTGATATATGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  312
J  95.7% (45/47)    IGHJ3*02     9    .......C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_81114

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43D*01                                                                                          349     2e-98
IGHD2-21*02                                                                                           16.1    2.3  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43D*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAA	GGGTCTACGTCGGTT	TGGTGACT	CTCCTCGACGATCAC	ACGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGGGTCTACGTCGGTTTGGTGACTCTCCTCGACGATCACACGGGATGGACGTC	AKGLRRFGDSPRRSHGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  H  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2503    1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCACCTTTCATGATTATGCCATGCACTGGGTCCGTCAAGCTCCGGGGAAGGGTCTGG  90
V  95.1% (235/247)  IGHV3-43D*01  47   ......................A..................G................................................  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  S  R  I  S  W  D  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  K  R  
                    Query_2503    91   AGTGGGTCTCTCGTATTAGTTGGGATGGTGGCACCACATACTATGCAGACTCTGTGAAGGGTCGATTCACCATCTCCAGAGACAAGAGGA  180
V  95.1% (235/247)  IGHV3-43D*01  137  ............T..................T.G...C...............................................C..C.  226
                                       E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                       K  N  S  L  Y  L  Q  M  S  S  L  G  A  E  D  T  A  L  Y  F  C  A  K  G  L  R  R  F  G  D  
                    Query_2503    181  AAAACTCCCTGTATCTGCAAATGAGCAGTCTGGGAGCTGAGGACACCGCCTTGTATTTCTGCGCAAAGGGTCTACGTCGGTTTGGTGACT  270
V  95.1% (235/247)  IGHV3-43D*01  227  ........................A.......A........................A...T.....-----------------------  293
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (8/8)     IGHD2-21*02   13   ----------------------------------------------------------------------------------........  20

                                       -IMGT----------------------->                                 
                                       S  P  R  R  S  H  G  M  D  V  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_2503    271  CTCCTCGACGATCACACGGGATGGACGTCTGGGGCCAAGGGACCGCGGTCACCGTCTCCTCA  332
J  95.7% (45/47)    IGHJ6*02      16   ---------------....T........................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_287093

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            335     4e-94
IGHD1-26*01                                                                                           12.2    35   
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	N/A	GGGAGC	CGACATAGCACAAATGGAGCATTGACAGGGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGGAGCCGACATAGCACAAATGGAGCATTGACAGGGAATGCTTTTCATATC	AGSRHSTNGALTGNAFHI	269	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	40	5	0	88.9
CDR1-IMGT	47	76	30	29	1	0	96.7
FR2-IMGT	77	127	51	47	4	0	92.2
CDR2-IMGT	128	154	27	22	5	0	81.5
FR3-IMGT	155	268	114	101	13	0	88.6
CDR3-IMGT (germline)	269	271	3	3	0	0	100
Total	N/A	N/A	270	242	28	0	89.6


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  V  V  S  G  D  S  V  S  S  N  S  A  A  W  G  W  I  R 
                    Query_2504   2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGTCGTCTCCGGGGACAGTGTCTCTAGCAACAGCGCTGCTTGGGGCTGGATCAGG  91
V  89.6% (242/270)  IGHV6-1*01   31   ........G...T.G......................C.A............................T.........AA..........  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  A  R  T  Y  Y  T  S  Q  W  I  H  D  Y  E  D  S  V  K  S  R 
                    Query_2504   92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGCTAGGACATACTACACGTCCCAGTGGATTCATGATTATGAAGATTCTGTGAAAAGTCGA  181
V  89.6% (242/270)  IGHV6-1*01   121  ...............................GA.............G....A.....TA.A.........C..TA...............  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  N  V  N  A  D  T  S  K  N  Q  I  S  L  Q  L  T  S  V  T  P  E  D  T  A  M  Y  F  C  A 
                    Query_2504   182  ATAAATGTCAACGCAGACACATCCAAGAACCAGATCTCCCTGCAGTTGACCTCTGTGACTCCCGAGGACACGGCTATGTACTTCTGTGCA  271
V  89.6% (242/270)  IGHV6-1*01   211  ....CCA.....C....................T...........C...A.........................G....T.A.......  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------------------CDR3-IMGT--------------------->                                  
                                       G  S  R  H  S  T  N  G  A  L  T  G  N  A  F  H  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2504   272  GGGAGCCGACATAGCACAAATGGAGCATTGACAGGGAATGCTTTTCATATCTGGGGCCAAGGGACAATGGTCACCGTGTCTTCAG  356
D  100.0% (6/6)     IGHD1-26*01  9    ......-------------------------------------------------------------------------------  14
J  95.8% (46/48)    IGHJ3*02     3    -------------------------------------........G...............................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_287092

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           327     9e-92
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	AGCT	CGATTTTTGGACTGGTTATT	TTAGGTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAAGCTCGATTTTTGGACTGGTTATTTTAGGTAACTTTGACTAC	AGSSIFGLVILGNFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  A  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_2505   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTAGCAGTGCTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGG  90
V  92.0% (229/249)  IGHV4-39*01  49   .............................T...........C..T...AG.........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  N  T  Y  Y  N  P  S  L  R  S  R  L  H  M  S  V  D  T  S 
                    Query_2505   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAACACCTACTATAATCCGTCCCTCAGGAGTCGACTCCACATGTCCGTAGACACTTCT  180
V  92.0% (229/249)  IGHV4-39*01  139  ..................................G.........C..C..........A.......G..AC...A...........G..C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  I  F  G  L  V 
                    Query_2505   181  AAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCAGACACGGCTGTTTATTACTGTGCGGGAAGCTCGATTTTTGGACTGGTT  270
V  92.0% (229/249)  IGHV4-39*01  229  ...................A.....G...........................G............A..---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-3*01   7    -------------------------------------------------------------------------...........G.....  23

                                      GT------------------>                                  
                                       I  L  G  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2505   271  ATTTTAGGTAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  325
D  95.0% (19/20)    IGHD3-3*01   24   ...----------------------------------------------------  26
J  97.8% (44/45)    IGHJ4*02     4    ----------..................................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_287091

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTGA	TATGGTTCGCGGAGTT	CTTGAGAGGGAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTGATATGGTTCGCGGAGTTCTTGAGAGGGAGGACTAC	RDLIWFAEFLRGRTT	283	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	69	70	68	1	1	97.1
CDR1-IMGT	70	93	24	21	3	0	87.5
FR2-IMGT	94	144	51	50	1	0	98
CDR2-IMGT	145	168	24	23	1	0	95.8
FR3-IMGT	169	282	114	111	3	0	97.4
CDR3-IMGT (germline)	283	288	6	6	0	0	100
Total	N/A	N/A	289	279	9	1	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q   L  E  Q  R  *  K  S  R  G  S  L  *  R  S  P  A  R  V  L  G  T  A  F  P  P  
                    Query_2506   1    GCAGCTGGTGCAG-CTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGCAAGGGTTCTGGGTACAGCTTTTCCACCTA  89
V  96.5% (279/289)  IGHV5-51*03  6    .............T..............................................T...........A.........A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                      T  G  S  P  G  C  A  R  C  P  G  K  A  W  S  G  W  G  S  S  I  L  L  T  L  I  P  D  T  A  
                    Query_2506   90   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACAGCCC  179
V  96.5% (279/289)  IGHV5-51*03  96   ........G........................................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                      R  P  S  G  A  R  S  P  S  Q  P  T  S  P  S  A  P  P  T  C  S  G  A  A  *  R  P  R  T  P  
                    Query_2506   180  GCCCTTCCGGGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  269
V  96.5% (279/289)  IGHV5-51*03  186  .T......AA................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                      P  C  I  T  V  R  D  L  I  W  F  A  E  F  L  R  G  R  T  T  G  A  R  E  P  W  S  P  S  P  
                    Query_2506   270  CATGTATTACTGTGCGAGACTTGATATGGTTCGCGGAGTTCTTGAGAGGGAGGACTACTGGGGCCAGAGAACCCTGGTCACCGTCTCCTC  359
V  96.5% (279/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  93.8% (15/16)    IGHD3-10*01  8    ------------------------.........G......--------------------------------------------------  23
J  97.5% (39/40)    IGHJ4*02     9    ----------------------------------------------------...............G......................  46

                                        
                                      Q 
                    Query_2506   360  AG  361
J  97.5% (39/40)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_287090

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           319     2e-89
IGHD2-8*01                                                                                            14.1    8.1  
IGHJ5*01                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-8*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGTCCG	AATGGTG	GAC	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATCGTCCGAATGGTGGACTCGACTCG	AKDRPNGGLDS	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2507   1    GGTCCCTGAGACTCTCCTGTGCAGCTTCTGGATTCACCTTCAGGAGTTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-30*18  47   .........................C.................T..C.A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  A  V  V  S  F  H  G  K  N  E  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2507   91   ATTGGGTGGCAGTTGTTTCATTTCATGGGAAGAATGAATTTTATGCTGACTCCGTGAAGGGGCGATTCACCATCTCCAGAGACAATTCCA  180
V  90.8% (227/250)  IGHV3-30*18  137  .G............A.A....A.G....A.GT...A...AC.....A..............C............................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  R  P  N  G  G  L  
                    Query_2507   181  AGAACACCCTGTATTTGCAAATGGACAGCCTGAGACCTGAGGACACGGCTGTTTATTACTGTGCAAAAGATCGTCCGAATGGTGGACTCG  270
V  90.8% (227/250)  IGHV3-30*18  227  .......G......C........A...........G................G...........G.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD2-8*01   14   -----------------------------------------------------------------------------.......------  20
J  92.9% (39/42)    IGHJ5*01     10   ---------------------------------------------------------------------------------------...  12

                                      ---->                                  
                                      D  S  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_2507   271  ACTCGTGGGGCCAAGGAACCCTGGTCATCGTATCCTCAG  309
J  92.9% (39/42)    IGHJ5*01     13   ....C......................C...C.......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_287097

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           21.8    0.043
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2508   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  D  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2508   91   AGTGGGTCTCATCCATTAGTGGGAGTGACGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.0% (230/250)  IGHV3-21*01  137  ....................A.T...AGTAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_2508   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.0% (230/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2508   271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_287096

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           327     8e-92
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	N/A	GGGGAG	ATGGCCCCATTGCAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGGGAGATGGCCCCATTGCAATTGACTAC	RKGEMAPLQLTT	242	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	103	51	48	2	1	94.1
CDR2-IMGT	104	127	24	21	3	0	87.5
FR3-IMGT	128	241	114	106	8	0	93
CDR3-IMGT (germline)	242	248	7	7	0	0	100
Total	N/A	N/A	249	231	17	1	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  H  W  V   P  R  L  Q  A  R  G  W 
                    Query_2509   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACGTTCAGTACCTATGCCATGCACTGGGTCC-CCAGGCTCCAGGCAAGGGGCTGG  89
V  92.8% (231/249)  IGHV3-30*18  47   ............................T........C.......G.....G..............G.......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       S  G  C  H  L  C  H  L  M  E  V  V  N  T  M  Q  T  P  C  R  A  D  S  P  S  P  E  T  I  P 
                    Query_2509   90   AGTGGGTGTCATTTATGTCATTTGATGGAAGTAGTAAACACTATGCAGACTCCGTGCAGGGCCGATTCTCCATCTCCAGAGACAATTCCA  179
V  92.8% (231/249)  IGHV3-30*18  137  ........G..G....A....A...........A....T.................A...........A.....................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                       R  T  R  C  I  F  K  W  T  A  *  E  L  R  T  R  L  C  I  I  V  R  K  G  E  M  A  P  L  Q 
                    Query_2509   180  AGAACACGGTGTATCTTCAAATGGACAGCCTGAGAACTGAGGACACGGCTGTGTATTATTGTGCGAAAGGGGGAGATGGCCCCATTGCAA  269
V  92.8% (231/249)  IGHV3-30*18  227  ........C.......G......A...........G......................C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD3-10*01  16   ---------------------------------------------------------------------......---------------  21

                                      ------->                                
                                       L  T  T  G  A  R  E  L  W  S  P  S  P  
                    Query_2509   270  TTGACTACTGGGGCCAGGGAACTCTGGTCACCGTCTCCTC  309
J  97.5% (39/40)    IGHJ4*02     7    ......................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_287095

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2510   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ........................................G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_2510   91   TGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ........G...A..T...............................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y 
                    Query_2510   181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............C....C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2510   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_287094

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           392     2e-111
IGHD2-2*01                                                                                            21.8    0.046 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAGTAGTGAA	TACCAGCTGCT	GTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCC	ARSSSEYQLLFWFDP	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  *  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_2511   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGTAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCAGCTA  90
V  93.4% (270/289)  IGHV5-51*03  6    .................................................A...............G............C...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  C  L  E  W  M  G  N  K  Y  P  G  D  S  D  G  R  Y  S  P
                    Query_2511   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAATGCCTGGAGTGGATGGGGAACAAATATCCTGGTGACTCTGATGGCAGATATAGTCC  180
V  93.4% (270/289)  IGHV5-51*03  96   ..................................G..................T..TC..................AC......C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  K  G  Q  V  T  I  P  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  H  K  A  S  G  T  A
                    Query_2511   181  GTCCTTCAAAGGCCAGGTCACCATCCCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCACAAGGCCTCGGGCACCGC  270
V  93.4% (270/289)  IGHV5-51*03  186  .......C.................T...C.........................................TG..........A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  F  Y  C  A  R  S  S  S  E  Y  Q  L  L  F  W  F  D  P  W  G  Q  G  T  L  V  T  V  T  S
                    Query_2511   271  CATGTTTTATTGTGCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCACCTC  360
V  93.4% (270/289)  IGHV5-51*03  276  .....A...C.........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (11/11)   IGHD2-2*01   16   -------------------------------...........------------------------------------------------  26
J  97.9% (46/47)    IGHJ5*02     5    ---------------------------------------------........................................T....  49

                                        
                                        
                    Query_2511   361  AG  362
J  97.9% (46/47)    IGHJ5*02     50   ..  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_131134

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           285     4e-79
IGHD6-19*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCAAC	GGGTATAGAAGTGGC	AGATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAACGGGTATAGAAGTGGCAGATAACTACTACTATGGTTTGGACGTC	AATGIEVADNYYYGLDV	237	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	11	1	0	91.7
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	19	5	0	79.2
FR3-IMGT	123	236	114	103	11	0	90.4
CDR3-IMGT (germline)	237	239	3	3	0	0	100
Total	N/A	N/A	228	205	23	0	89.9


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  R  S  H  G  M  Q  W  V  R  Q  A  P  G  K  G  L  E  W  L  A  V  I 
                    Query_2512   12   TGTGCAGCTTCTGGATTCACCTTCAGAAGTCATGGCATGCAGTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAATGGTTGGCAGTTATC  101
V  89.9% (205/228)  IGHV3-30*03  64   ........C.................T..CT..........C................................G...G..........A  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  F  N  G  S  H  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  K  N  A  L  Y  L 
                    Query_2512   102  TCATTTAATGGAAGTCATACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCAAGAACGCACTGTATCTG  191
V  89.9% (205/228)  IGHV3-30*03  154  ....A.G........A...A...........................A......A.......................A.G.........  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------------CDR3-IMGT---------------
                                       Q  M  A  S  L  R  S  A  D  T  A  V  Y  F  C  A  A  T  G  I  E  V  A  D  N  Y  Y  Y  G  L 
                    Query_2512   192  CAAATGGCCAGCCTGAGATCTGCGGACACGGCTGTTTACTTCTGTGCGGCAACGGGTATAGAAGTGGCAGATAACTACTACTATGGTTTG  281
V  89.9% (205/228)  IGHV3-30*03  244  ......AA..........G...A............G..T.A.......------------------------------------------  291
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  93.3% (14/15)    IGHD6-19*01  1    -----------------------------------------------------........C......----------------------  15
J  94.6% (53/56)    IGHJ6*02     7    -------------------------------------------------------------------------..........C...A..  23

                                      ----->                                 
                                       D  V  W  G  H  G  T  T  V  T  V  S  S 
                    Query_2512   282  GACGTCTGGGGCCACGGGACCACGGTCACCGTCTCCTCA  320
J  94.6% (53/56)    IGHJ6*02     24   ..............A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_246666

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         333     1e-93
IGHD3-9*01                                                                                            14.1    9.2  
IGHJ2*01                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGACCGATAC	TGACTGG	GGTGGTCACACAGGGCTCTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACCGATACTGACTGGGGTGGTCACACAGGGCTCTTCTGGTACTTCGATCTC	AKTDTDWGGHTGLFWYFDL	264	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	77	27	25	2	0	92.6
FR2-IMGT	78	128	51	49	2	0	96.1
CDR2-IMGT	129	149	21	14	7	0	66.7
FR3-IMGT	150	263	114	101	13	0	88.6
CDR3-IMGT (germline)	264	267	4	4	0	0	100
Total	N/A	N/A	267	240	27	0	89.9


Alignments

                                        <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                           G  L  V  K  P  S  E  T  L  S  L  T  C  V  V  S  G  Y  S  I  N  N  G  Y  Y  W  G  W  L  
                    Query_2513     1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCGTTGTGTCTGGTTACTCCATCAACAATGGTTACTACTGGGGCTGGCTCC  90
V  89.9% (240/267)  IGHV4-38-2*01  26   ................T.........................C...C................G..G...................A...  115
                                           G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  

                                        --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                        R  Q  P  P  G  K  G  L  E  W  I  G  S  V  Y  H  R  G  D  A  Y  Y  N  P  S  L  K  S  R  V  
                    Query_2513     91   GGCAGCCCCCAGGAAAGGGGCTGGAGTGGATTGGGAGTGTCTATCATCGCGGGGACGCGTACTACAATCCGTCCCTCAAGAGTCGAGTCA  180
V  89.9% (240/267)  IGHV4-38-2*01  116  .............G........................A........A.T...AG.A.C........C......................  205
                                        R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  

                                        ----------------------FR3-IMGT----------------------------------------------------><------
                                        T  V  S  M  D  T  S  S  N  Q  V  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  
                    Query_2513     181  CCGTCTCAATGGACACGTCCAGTAATCAGGTCTCCCTGAGCCTGAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAAGA  270
V  89.9% (240/267)  IGHV4-38-2*01  206  ..A.A...G.A..........AG..C...T.........AG.....C...............................A........---  292
                                        T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A     

                                        -----------------CDR3-IMGT----------------------->                                  
                                        T  D  T  D  W  G  G  H  T  G  L  F  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2513     271  CCGATACTGACTGGGGTGGTCACACAGGGCTCTTCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  354
D  100.0% (7/7)     IGHD3-9*01     15   -------.......----------------------------------------------------------------------  21
J  100.0% (50/50)   IGHJ2*01       4    ----------------------------------..................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_131136

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           369     2e-104
IGHD3-10*01                                                                                           12.2    36    
IGHJ3*01                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCCCGCGAGACACTCAC	TTCGGG	CGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCCGCGAGACACTCACTTCGGGCGGGCTTTTGATGTC	ATPRDTHFGRAFDV	290	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	70	5	0	93.3
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	19	5	0	79.2
FR3-IMGT	176	289	114	103	11	0	90.4
CDR3-IMGT (germline)	290	293	4	4	0	0	100
Total	N/A	N/A	292	264	28	0	90.4


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  T  S  G  S  S  V  K  V  S  C  K  T  S  G  G  P  F  S 
                    Query_2514   2    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGACGTCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACTTCTGGAGGCCCCTTCAGT  91
V  90.4% (264/292)  IGHV1-69*01  1    ...G...................G.............A.C.............................G...........A.......C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  A  L  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  F  I  P  T  L  G  T  T  D  Y 
                    Query_2514   92   AACTATGCTCTCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGCTGGGATGGTTCATCCCTACCCTTGGGACAACAGACTAC  181
V  90.4% (264/292)  IGHV1-69*01  91   .G.......A...............................G.........A.....G..A.........T.T....T...G..A.....  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  T  F  Q  G  R  V  T  F  T  A  D  E  S  T  G  T  V  Y  M  E  V  S  G  L  T  S  E  D 
                    Query_2514   182  GCACAGACGTTCCAGGGCAGAGTCACTTTTACCGCGGACGAATCCACGGGCACAGTCTACATGGAGGTGAGCGGCCTGACATCTGAAGAC  271
V  90.4% (264/292)  IGHV1-69*01  181  .......A..................GA....................A......C..........C.....A......G......G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  T  P  R  D  T  H  F  G  R  A  F  D  V  W  G  Q  G  T  L  V  T  V  S 
                    Query_2514   272  ACGGCCGTCTATTACTGTGCGACCCCGCGAGACACTCACTTCGGGCGGGCTTTTGATGTCTGGGGCCAGGGGACACTGGTCACCGTCTCT  361
V  90.4% (264/292)  IGHV1-69*01  271  ........G.............--------------------------------------------------------------------  292
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (6/6)     IGHD3-10*01  13   ---------------------------------------......---------------------------------------------  18
J  95.7% (44/46)    IGHJ3*01     5    ------------------------------------------------....................A......A..............  46

                                          
                                       S  
                    Query_2514   362  TCAG  365
J  95.7% (44/46)    IGHJ3*01     47   ....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_131137

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           315     5e-88
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGGA	AGCAGTGG	N/A	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGGAAGCAGTGGCTATTACCACGGTATGGACGTC	ARSGSSGYYHGMDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	21	24	4	4	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	123	24	22	2	0	91.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	223	212	11	0	95.1


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  R  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_2515   21   GTCTGGATTCACCTTCAGGAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCCGTTATATGGTATGA  110
V  95.1% (212/223)  IGHV3-33*01  72   ..................T.G......................................................A..............  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  T  N  E  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  E  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_2515   111  TGGAACTAATGAACATTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGAGAATTCCAAGAACACGCTGTATCTGCAAATGAA  200
V  95.1% (212/223)  IGHV3-33*01  162  .....G....A..T.C....C....................................C................................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------------CDR3-IMGT--------------->           
                                        S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  S  G  S  S  G  Y  Y  H  G  M  D  V  W  G  Q  G
                    Query_2515   201  CAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGATCGGGAAGCAGTGGCTATTACCACGGTATGGACGTCTGGGGCCAAGG  290
V  95.1% (212/223)  IGHV3-33*01  252  ...........C...............G...............-----------------------------------------------  294
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (8/8)     IGHD6-19*01  7    -------------------------------------------------........---------------------------------  14
J  96.4% (53/55)    IGHJ6*02     8    ---------------------------------------------------------...C...T.........................  40

                                                            
                                        T  T  V  T  V  S  S 
                    Query_2515   291  GACCACGGTCACCGTCTCCTCA  312
J  96.4% (53/55)    IGHJ6*02     41   ......................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_246663

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           290     1e-80
IGHD6-19*01                                                                                           12.2    30   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTGGC	GGCTGG	CTTAC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTGGCGGCTGGCTTACGGACGTC	TRGGGWLTDV	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	214	29	0	88.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  F  S  C  T  V  S  G  G  S  I  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_2516   4    CCCTGAGATTCTCCTGTACTGTCTCTGGAGGCTCCATCAGTGGTTTCTACTGGAGCTGGATTCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  88.1% (214/243)  IGHV4-59*01  50   .....TCCC..A....C...........T............A...A...............C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  N  I  H  Y  S  G  H  T  N  Y  N  P  S  L  R  S  R  V  I  I  S  L  D  T  S  N  N  
                    Query_2516   94   GGATTGGGAATATCCACTACAGTGGGCACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCATCATATCGCTGGACACGTCCAACAACC  183
V  88.1% (214/243)  IGHV4-59*01  140  ........T.....T.T.........AG.......................A...........C......AG.A...........G....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------CDR3-IMGT--------->    
                                      Q  I  S  L  K  V  N  S  G  T  A  A  D  T  A  L  Y  Y  C  T  R  G  G  G  W  L  T  D  V  W  
                    Query_2516   184  AGATCTCCCTGAAGGTGAACTCTGGGACCGCTGCGGACACGGCCCTCTATTATTGTACGAGAGGTGGCGGCTGGCTTACGGACGTCTGGG  273
V  88.1% (214/243)  IGHV4-59*01  230  ..T...........C...G.....T...................G.G.....C...G......---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD6-19*01  13   --------------------------------------------------------------------......----------------  18
J  100.0% (40/40)   IGHJ6*02     23   -------------------------------------------------------------------------------...........  33

                                                                   
                                      G  Q  G  T  T  V  T  V  S  S 
                    Query_2516   274  GCCAAGGGACCACGGTCACCGTCTCCTCA  302
J  100.0% (40/40)   IGHJ6*02     34   .............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_131131

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           392     2e-111
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ5*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	ACAAAGGGGGGTG	ATTACTATGATACTAGTGG	CCTT	GACAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAACAAAGGGGGGTGATTACTATGATACTAGTGGCCTTGACACC	AGTKGGDYYDTSGLDT	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  M  V  S  C  K  A  S  G  D  I  F  I  N  Y
                    Query_2517   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGATGGTCTCCTGCAAGGCTTCTGGAGACATCTTCATTAATTA  90
V  93.4% (270/289)  IGHV1-69*01  6    ..................G...............................A.......................G..C.....GC.GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  C  V  G  G  I  I  P  L  F  G  T  T  N  Y  A  Q
                    Query_2517   91   TGGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGCGTGGGAGGGATCATCCCTCTCTTTGGTACAACAAACTACGCACA  180
V  93.4% (270/289)  IGHV1-69*01  96   ..C.....G....................................GA.................A...........G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  N  T  A  Y  M  V  L  S  S  L  R  S  E  D  T  A
                    Query_2517   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAACACAGCCTACATGGTGCTGAGCAGCCTAAGATCTGAAGACACGGC  270
V  93.4% (270/289)  IGHV1-69*01  186  ............................................G..............A............G........G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  G  T  K  G  G  D  Y  Y  D  T  S  G  L  D  T  W  G  Q  G  T  L  V  T  V  S
                    Query_2517   271  CGTGTATTACTGTGCGGGAACAAAGGGGGGTGATTACTATGATACTAGTGGCCTTGACACCTGGGGCCAGGGAACCCTGGTCACCGTCTC  360
V  93.4% (270/289)  IGHV1-69*01  276  ................A..-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  3    --------------------------------............G......---------------------------------------  21
J  97.4% (38/39)    IGHJ5*02     12   -------------------------------------------------------...C...............................  46

                                          
                                        S 
                    Query_2517   361  CTCA  364
J  97.4% (38/39)    IGHJ5*02     47   ....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_131132

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_2518   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_2518   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_2518   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_2518   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_131133

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD5-18*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATAGTC	ATGGTTAC	GGAGGCG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATAGTCATGGTTACGGAGGCGTTGACTAC	ARYSHGYGGVDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2519   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.9% (238/243)  IGHV4-59*01  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  N  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2519   91   TGGATTGGGTATATCTACAACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACTTCCAAGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  .................TT.............................................................G.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       L  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D 
                    Query_2519   181  CTGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATATAGTCATGGTTACGGAGGCGTTGAC  270
V  97.9% (238/243)  IGHV4-59*01  229  .A.............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD5-18*01  13   ----------------------------------------------------------------------........------------  20
J  95.2% (40/42)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  S  L  V  T  V  S  P  
                    Query_2519   271  TACTGGGGCCAGGGATCCCTGGTCACCGTCTCCCCAG  307
J  95.2% (40/42)    IGHJ4*02     12   ...............A.................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_184642

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            327     9e-92
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTTTG	ACTATGATAGTCGTGGCTTTTAC	AGACGTTCTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTTTGACTATGATAGTCGTGGCTTTTACAGACGTTCTAACTACTTTGACTTC	ARGFDYDSRGFYRRSNYFDF	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	51	0	0	100
CDR2-IMGT	108	128	21	21	0	0	100
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	228	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  T  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_2520   1    GGTCCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCACTACTAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  92.3% (228/247)  IGHV4-4*01   47   ..A.....TCC...A.....G.....................GC.G......C.....................................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  Q  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  
                    Query_2520   91   TGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCCAGTACAACCCGTCACTCAAGAGTCGAGTCACGATATCAGTAGACAAGTCCA  180
V  92.3% (228/247)  IGHV4-4*01   137  ......................................A.C...........C.................C...................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  I  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  F  D  Y  D  S  R  
                    Query_2520   181  AGAACCAGATCTCCCTGAGGTTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGGCTTTGACTATGATAGTCGTG  270
V  92.3% (228/247)  IGHV4-4*01   227  ........T.........A.C....C...............................G.........-----------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                          
D  87.0% (20/23)    IGHD3-22*01  6    ---------------------------------------------------------------------------...........A...  20

                                      R3-IMGT------------------------>                                  
                                      G  F  Y  R  R  S  N  Y  F  D  F  W  G  R  G  T  L  V  A  V  S  S  
                    Query_2520   271  GCTTTTACAGACGTTCTAACTACTTTGACTTCTGGGGCCGGGGAACCCTGGTCGCTGTCTCCTCAG  336
D  87.0% (20/23)    IGHD3-22*01  21   .T.A....----------------------------------------------------------  28
J  91.7% (44/48)    IGHJ4*02     1    ------------------............A........A.............A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_184643

Length=441
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           382     4e-108
IGHD2-2*01                                                                                            19.9    0.20  
IGHJ2*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GAAGGTCCCCCACAGAAACA	ATTGTAGTAG	ACCCAGACGACATCCTGTGGCGTTTTGACACATCCGAAGAGCAAACTGCAA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGAAGGTCCCCCACAGAAACAATTGTAGTAGACCCAGACGACATCCTGTGGCGTTTTGACACATCCGAAGAGCAAACTGCAAACTGGTATTTCGATCTC	GRSPTETIVVDPDDILWRFDTSEEQTANWYFDL	284	382	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	284	1	1	0	0	100
Total	N/A	N/A	284	264	20	0	93


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  N  F
                    Query_2521   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGTAACTT  90
V  93.0% (264/284)  IGHV1-69*01  6    ..................G.................................................................C.G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  V  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  S  F  G  T  A  D  Y  A  Q
                    Query_2521   91   TGGTGTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCCAGCTTTGGCACAGCAGACTACGCGCA  180
V  93.0% (264/284)  IGHV1-69*01  96   ..C.A..........................................................T.T......T......A.......A..  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  R  G  R  L  T  I  A  A  D  E  S  A  T  T  V  N  M  E  L  S  G  L  R  S  E  D  T  A
                    Query_2521   181  GAAGTTCCGGGGCAGACTCACGATTGCCGCGGACGAATCTGCGACCACAGTCAACATGGAGCTGAGCGGCCTGAGATCTGAGGACACGGC  270
V  93.0% (264/284)  IGHV1-69*01  186  ........A.......G........A.............CA...G.....C.T..............A......................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------------------------------CDR3-IMGT-----------------------
                                        V  Y  Y  C  G  R  S  P  T  E  T  I  V  V  D  P  D  D  I  L  W  R  F  D  T  S  E  E  Q  T
                    Query_2521   271  CGTGTATTACTGTGGAAGGTCCCCCACAGAAACAATTGTAGTAGACCCAGACGACATCCTGTGGCGTTTTGACACATCCGAAGAGCAAAC  360
V  93.0% (264/284)  IGHV1-69*01  276  ..............----------------------------------------------------------------------------  289
                                        V  Y  Y  C                                                                              
D  100.0% (10/10)   IGHD2-2*01   6    ----------------------------------..........----------------------------------------------  15

                                      --------------------->                                  
                                        A  N  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2521   361  TGCAAACTGGTATTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  416
J  98.0% (50/51)    IGHJ2*01     3    -----.......C...........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 43444296


Query= Query_184640

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           361     4e-102
IGHD3-22*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AACCA	GTACTACTATGATATTAGTGGT	AACCTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAACCAGTACTACTATGATATTAGTGGTAACCTTTTTGACTAC	ARNQYYYDISGNLFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  T  N  Y  Y  W  G  W  V  R  Q  P  P  G  K  G 
                    Query_2522   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGCAATACTAATTACTACTGGGGCTGGGTCCGCCAGCCCCCAGGGAAGGGG  90
V  96.4% (240/249)  IGHV4-39*01  49   .............................T.............G..G..G................A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  T  T  S  Y  N  P  S  L  K  S  R  V  T  T  S  V  D  T  S 
                    Query_2522   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGACCACCTCCTACAACCCGTCCCTCAAGAGTCGAGTCACCACATCCGTAGACACGTCC  180
V  96.4% (240/249)  IGHV4-39*01  139  ..................................G.....A................................T................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  N  Q  Y  Y  Y  D  I 
                    Query_2522   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGCGAGAAACCAGTACTACTATGATATT  270
V  96.4% (240/249)  IGHV4-39*01  229  .....................................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (20/22)    IGHD3-22*01  1    --------------------------------------------------------------------------...T..........G.  16

                                      GT------------------>                                  
                                       S  G  N  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2522   271  AGTGGTAACCTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  90.9% (20/22)    IGHD3-22*01  17   ......-------------------------------------------------  22
J  100.0% (43/43)   IGHJ4*02     6    ------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_184641

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGTGAGGAAGGA	TACTATGATACTAGTGGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGTGAGGAAGGATACTATGATACTAGTGGTTATTCGGACTAT	AKDGEEGYYDTSGYSDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  T  P  G  K  G  L  
                    Query_2523   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGATATGCCATGTCCTGGGTCCGCCAGACTCCAGGGAAGGGCCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ...........................................C..C.........AG.............G.............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  V  S  G  S  G  G  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2523   91   AGTGGGTCTCAACAGTGAGTGGTAGTGGAGGTGGCACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  ...........G.TA.T...........T...A..........C..............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  I  Y  Y  C  A  K  D  G  E  E  G  Y  Y  
                    Query_2523   181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAACCGAGGACACGGCCATATATTACTGTGCGAAAGATGGTGAGGAAGGATACTATG  270
V  93.6% (234/250)  IGHV3-23*01  227  ..............C....................G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.5% (21/22)    IGHD3-22*01  5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                      D  T  S  G  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2523   271  ATACTAGTGGTTATTCGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.5% (21/22)    IGHD3-22*01  12   ...G...........------------------------------------------  26
J  97.5% (39/40)    IGHJ4*02     9    -----------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_184646

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-3*01                                                                                            14.1    8.2  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  V  A  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_2524   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGTCGCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  95.1% (235/247)  IGHV4-31*03  50   .....TCC...A..................G.T..........................................A..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  R  G  S  T  Y  S  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_2524   94   TGGAGTGGATTGGGTACATCTATTACCGTGGGAGCACGTACTCCAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  95.1% (235/247)  IGHV4-31*03  140  ..........................A..........C....A...............................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  L  S  V  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  
                    Query_2524   184  AGAACCAGTTGTCCGTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCG  273
V  95.1% (235/247)  IGHV4-31*03  230  ..........C...C....................................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  100.0% (51/51)   IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2524   274  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (51/51)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_131139

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           364     5e-103
IGHD1-26*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAT	TAGTGGGAGCTACTAC	AGATAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGATTAGTGGGAGCTACTACAGATATTTTGACTAC	ARGISGSYYRYFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2525   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTAAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-48*03  47   ........................................C.................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  L  I  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2525   91   AGTGGGTTTCATACATTAGTAGTAGTGGGAGTCTCATATCCTACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCG  180
V  96.8% (241/249)  IGHV3-48*03  137  ............................T...AC.....A........................A........................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  I  S  G  S  Y  Y  
                    Query_2525   181  AGAACTCACTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGGATTAGTGGGAGCTACTACA  270
V  96.8% (241/249)  IGHV3-48*03  227  ..........G..........................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (16/16)   IGHD1-26*01  5    -------------------------------------------------------------------------................-  20

                                      ------------->                                  
                                      R  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2525   271  GATATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (43/43)   IGHJ4*02     6    -----...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_246669

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           329     3e-92
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TATCCTCTATGAC	AGTGGGAGCTAC	ATCGGAAG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATATCCTCTATGACAGTGGGAGCTACATCGGAAGCTTTGACCAC	VRDILYDSGSYIGSFDH	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  V  A  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2526   1    GGTCCCTGAGACTCTCCTGTTCAGTCGCTGGATTCACCTTCAGTAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  92.0% (230/250)  IGHV3-64*05  47   ........................C.T...................C...........................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  H  V  S  S  I  T  G  H  G  D  F  T  Y  Y  A  D  S  V  K  D  R  S  T  I  S  R  D  N  S  
                    Query_2526   91   AACATGTTTCAAGTATTACTGGTCATGGGGATTTCACATACTACGCAGACTCAGTGAAGGACAGATCCACCATCTCCAGAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-64*05  137  ..T........GC.....G.A..A......G.AG..........................G.....T.......................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  D  T  L  Y  F  Q  M  S  S  L  R  P  E  D  T  A  M  Y  Y  C  V  R  D  I  L  Y  D  S  G  
                    Query_2526   181  AAGACACGCTGTATTTTCAAATGAGCAGTCTGAGACCTGAGGACACGGCTATGTATTACTGTGTGAGAGATATCCTCTATGACAGTGGGA  270
V  92.0% (230/250)  IGHV3-64*05  227  .GA...........G....................G..............G...............A...--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (12/12)   IGHD1-26*01  6    -----------------------------------------------------------------------------------.......  12

                                      GT-------------------->                                  
                                      S  Y  I  G  S  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2526   271  GCTACATCGGAAGCTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (12/12)   IGHD1-26*01  13   .....----------------------------------------------------  17
J  97.7% (43/44)    IGHJ4*02     5    -------------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_190688

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           343     2e-96
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2527   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (232/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_2527   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  E  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_2527   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGAAACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  94.7% (232/245)  IGHV4-59*01  229  .........C....G.....C.................C........G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  91.4% (53/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  P  T  V  F  V  S  S 
                    Query_2527   271  GTCTGGGGCCAAGGGCCCACGGTCTTCGTCTCCTCA  306
J  91.4% (53/58)    IGHJ6*02     27   ...............A........AC..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_38313

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD4-17*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGTATACCTGA	TGACTACGTTGAC	AC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGTATACCTGATGACTACGTTGACACCTTTGACCAG	AGIPDDYVDTFDQ	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	242	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2528   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (242/246)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  L  I  G  Y  I  Y  Y  S  G  S  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2528   91   CTGGAGTTGATTGGGTACATCTATTACAGTGGGAGCGCCAACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.4% (242/246)  IGHV4-31*03  139  .......G............................A..T..................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  I  P  D  D  Y  V  D 
                    Query_2528   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGGGTATACCTGATGACTACGTTGAC  270
V  98.4% (242/246)  IGHV4-31*03  229  .....................................................G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  92.3% (12/13)    IGHD4-17*01  1    -----------------------------------------------------------------------------........G....  13

                                      ----------->                                  
                                       T  F  D  Q  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2528   271  ACCTTTGACCAGTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  316
J  93.2% (41/44)    IGHJ4*02     5    --.......T.C.......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_190683

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           427     1e-121
IGHD6-13*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              114     2e-29 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TT	CAGCAGCTGG	CAAACCGGCTAACA	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCAGCAGCTGGCAAACCGGCTAACAATTACTACTACTACTACGGTCTGGACGTC	ARHSAAGKPANNYYYYYGLDV	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	282	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_2529   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGTTA  90
V  96.9% (282/291)  IGHV5-51*01  6    ....................................C..................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  L  P  G  K  G  L  E  W  M  G  F  I  Y  P  G  D  S  H  T  K  Y  S  P
                    Query_2529   91   CTGGATCGGCTGGGTGCGCCAGCTGCCCGGGAAAGGCCTGGAGTGGATGGGATTCATCTATCCTGGTGACTCTCATACCAAATACAGCCC  180
V  96.9% (282/291)  IGHV5-51*01  96   ......................A............................GA....................G......G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_2529   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (282/291)  IGHV5-51*01  186  .......C...........................................................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        M  Y  Y  C  A  R  H  S  A  A  G  K  P  A  N  N  Y  Y  Y  Y  Y  G  L  D  V  W  G  Q  G  T
                    Query_2529   271  CATGTATTACTGTGCGAGACATTCAGCAGCTGGCAAACCGGCTAACAATTACTACTACTACTACGGTCTGGACGTCTGGGGCCAAGGGAC  360
V  96.9% (282/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------..........---------------------------------------------------------  18
J  98.4% (61/62)    IGHJ6*02     1    -----------------------------------------------....................A......................  43

                                                         
                                        T  V  T  V  S  S 
                    Query_2529   361  CACGGTCACCGTCTCCTCA  379
J  98.4% (61/62)    IGHJ6*02     44   ...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_190681

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         300     9e-84
IGHD2-15*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GGAGAGGGCTGTCGCGCTT	TTGTAGTGCTGGT	TCCTGCGAACTCTC	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGGGAGAGGGCTGTCGCGCTTTTGTAGTGCTGGTTCCTGCGAACTCTCCGGTATGGACGTC	ATGRGLSRFCSAGSCELSGMDV	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  V  V  S  G  G  S  I  T  S  G  A  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_2530     1    ACCCTGTCCCTCACCTGCGTTGTCTCTGGTGGCTCCATTACCAGTGGGGCTTCCTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  88.4% (221/250)  IGHV4-30-4*01  49   ..................AC..................C.G......T.A..A.....................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  N  I  H  H  S  G  N  T  Y  Y  N  P  S  L  N  S  R  I  T  I  S  I  D  R  S 
                    Query_2530     91   CTGGAGTGGATTGGGAACATCCATCACAGCGGGAACACCTACTACAACCCGTCCCTCAACAGTCGGATTACCATATCCATAGATAGGTCC  180
V  88.4% (221/250)  IGHV4-30-4*01  139  ...............T.....T..T....T....G........................G.....AG..........AG....C.C....  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------------
                                         K  N  Q  V  S  L  N  L  N  S  A  T  V  A  D  T  A  V  Y  Y  C  A  T  G  R  G  L  S  R  F 
                    Query_2530     181  AAAAACCAGGTCTCCCTGAACCTGAACTCTGCAACAGTCGCGGACACGGCCGTGTATTACTGTGCCACAGGGAGAGGGCTGTCGCGCTTT  270
V  88.4% (221/250)  IGHV4-30-4*01  229  ..G......T..........G....G.....TG..T.C...A.........................G..--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD2-15*01    7    -----------------------------------------------------------------------------------------.  7

                                        --CDR3-IMGT--------------------------->                                 
                                         C  S  A  G  S  C  E  L  S  G  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_2530     271  TGTAGTGCTGGTTCCTGCGAACTCTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  342
D  92.3% (12/13)    IGHD2-15*01    8    .......G....------------------------------------------------------------  19
J  97.8% (45/46)    IGHJ6*02       17   --------------------------..................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_278399

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           288     5e-80
IGHD2-2*01                                                                                            18.0    0.59 
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	ACG	AGTAGTGCCAGC	CCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAACGAGTAGTGCCAGCCCTTACTACCACCTCGGCATGGACGTC	VRTSSASPYYHLGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	216	32	0	87.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  P  G  F  T  F  D  S  F  A  M  H  W  V  R  Q  A  P  D  R  G  L  
                    Query_2531   1    GGTCCCTGAGACTCTCCTGTGCAGCCCCTGGATTCACCTTCGACAGCTTTGCGATGCACTGGGTCCGCCAGGCTCCCGACAGGGGGCTGG  90
V  87.1% (216/248)  IGHV3-30*04  47   ..........................T..............AGT....A...T.......................A.G..A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  V  S  Y  D  G  S  P  Q  F  Y  A  D  S  V  K  G  R  F  S  V  S  R  D  N  S  
                    Query_2531   91   AGTGGGTGGCAGTTGTTTCATATGATGGAAGTCCTCAGTTTTACGCAGACTCCGTGAAGGGCCGCTTCAGCGTCTCCAGAGACAATTCCG  180
V  87.1% (216/248)  IGHV3-30*04  137  ..............A.A...............AA.A.A.AC.......................A....C.A.................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      A  N  T  V  S  L  Q  M  N  D  L  R  R  E  D  S  G  V  Y  Y  C  V  R  T  S  S  A  S  P  Y  
                    Query_2531   181  CGAACACGGTGTCTCTGCAAATGAACGACCTGAGACGTGAGGACTCGGGTGTTTATTACTGTGTGAGAACGAGTAGTGCCAGCCCTTACT  270
V  87.1% (216/248)  IGHV3-30*04  227  A.......C...A.............AG.......GC.......A...C...G..........C....----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD2-2*01   11   -----------------------------------------------------------------------......A.....-------  22
J  90.6% (48/53)    IGHJ6*02     6    --------------------------------------------------------------------------------------....  9

                                      T------------------>                             
                                      Y  H  L  G  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_2531   271  ACCACCTCGGCATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTC  319
J  90.6% (48/53)    IGHJ6*02     10   ..T..TA...T.................A....................  58


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_190687

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           344     6e-97
IGHD3-9*01                                                                                            14.1    8.1  
IGHJ4*02                                                                                              41.1    1e-07


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCCGGGCAGCAG	TTGACTG	TCCATG	GGGGC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  N  Y  G  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_2532   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTCAGTAACTATGGCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  94.0% (235/250)  IGHV3-21*01  47   ....................................CC.......G....A..............................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  G  S  D  Y  I  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2532   91   AGTGGGTCTCATCCATTAGTAGTGGTAGTGATTACATATACTACGTAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-21*01  137  .......................A.....AG..............C............................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT---------------------------------------------------->                            
                                      R  N  S  V  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  A  G  Q  Q  L  T  
                    Query_2532   181  GGAACTCAGTGTTTCTACAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTATATTACTGTGCGAGAGATGCCGGGCAGCAGTTGACTG  270
V  94.0% (235/250)  IGHV3-21*01  227  A.......C...A...G...................C...............G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-9*01   14   -----------------------------------------------------------------------------------.......  20

                                                                             
                                      V  H  G  G  P  G  T  Q  V  P  L  S  S  
                    Query_2532   271  TCCATGGGGGCCCGGGAACCCAGGTCCCCCTCTCCTCAG  309
J  87.9% (29/33)    IGHJ4*02     16   ------......A........T....A..G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_190686

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	26	27	26	0	1	96.3
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	102	52	50	1	1	96.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	243	230	11	2	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><---------------------FR2-IMGT---------
                                       T  L  S  L  T   A  L  S  L  V  A  P  S  V  L  T  T  G  A  G  S  G  S  P  P  G  K  G  L  E
                    Query_2533   1    ACCCTGTCCCTCAC-TGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCCGGGAAGGGACTGGA  89
V  94.7% (230/243)  IGHV4-59*01  49   ..............C...........................AG..............................A-..............  137
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P   G  K  G  L  E

                                      ------------><-----CDR2-IMGT-----><----------------------------------------------------FR3
                                        W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N
                    Query_2533   90   GTGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAA  179
V  94.7% (230/243)  IGHV4-59*01  138  .................AT........G.G............................................................  227
                                        W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N

                                      -IMGT----------------------------------------------------><----------------CDR3-IMGT------
                                        Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W
                    Query_2533   180  CCAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTG  269
V  94.7% (230/243)  IGHV4-59*01  228  ..............A......C.........G................G..............---------------------------  290
                                        Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                              
D  93.3% (14/15)    IGHD3-10*01  11   -------------------------------------------------------------------..........G....--------  25
J  97.9% (46/47)    IGHJ5*02     5    ---------------------------------------------------------------------------------------...  7

                                      --------->                                  
                                        L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2533   270  GCTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     8    .T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_68917

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           339     2e-95
IGHD2-2*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTATCGACTGTACCAT	TACCACCTGC	CGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTATCGACTGTACCATTACCACCTGCCGTTTTGACTTC	ASLIDCTITTCRFDF	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  G  S  I  N  S  R  N  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_2534   4    CCCTGAGACTCTCCTGTTCTGTCTCTGGTGGCTCCATCAACAGTCGTAATTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  93.9% (232/247)  IGHV4-39*01  50   .....TCC...A....CA.....................G....A...G.........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  N  Y  S  G  T  T  Y  Y  T  A  S  L  K  S  R  V  T  M  S  V  D  T  S  
                    Query_2534   94   TGGAGTGGATTGGGAGTATCAATTATAGTGGGACCACCTACTACACCGCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCCA  183
V  93.9% (232/247)  IGHV4-39*01  140  ....................T............G...........A.C.........................A................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  I  D  C  T  I  T  
                    Query_2534   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGCCTTATCGACTGTACCATTACCA  273
V  93.9% (232/247)  IGHV4-39*01  230  ..........................................................C........-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  90.0% (9/10)     IGHD2-2*01   16   -------------------------------------------------------------------------------------.....  20

                                      ---------------->                                  
                                      T  C  R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2534   274  CCTGCCGTTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  90.0% (9/10)     IGHD2-2*01   21   G....----------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    --------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_91899

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           325     3e-91
IGHD2-15*01                                                                                           12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGGGAAAACGGCTGGGATCGTA	GGTGGT	CCGGT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGGGAAAACGGCTGGGATCGTAGGTGGTCCGGTTTTCACTTC	ASRENGWDRRWSGFHF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2535   1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.0% (225/242)  IGHV4-59*08  49   ....................T......................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       L  I  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S  R  N 
                    Query_2535   91   TTGATTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGTCGACTCACCATCTCAGTAGACACGTCGAGGAAC  180
V  93.0% (225/242)  IGHV4-59*08  139  .G......G...A........A........A.....................A.......G.......A..............C.A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  S  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  N  G  W  D  R  R  W 
                    Query_2535   181  CAGTTCTCCCTGAGCGTGAACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCGAGCCGGGAAAACGGCTGGGATCGTAGGTGG  270
V  93.0% (225/242)  IGHV4-59*08  229  .............AGC...G.........C................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD2-15*01  14   -------------------------------------------------------------------------------------.....  18

                                      -------------->                                  
                                       S  G  F  H  F  W  G  P  G  T  L  V  T  V  S  S  
                    Query_2535   271  TCCGGTTTTCACTTCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  319
D  100.0% (6/6)     IGHD2-15*01  19   .------------------------------------------------  19
J  93.0% (40/43)    IGHJ4*02     6    ------...G...A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_91898

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           310     1e-86
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGACTAG	TGGAACGAC	TCTTGTGT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGACTAGTGGAACGACTCTTGTGTACTGGTTCGACCCC	ARTSGTTLVYWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	219	21	0	91.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  N  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  Q  L  E 
                    Query_2536   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAATACCTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAACAACTGGAG  90
V  91.2% (219/240)  IGHV4-59*08  49   ..................A.....................G..GT...................................GGG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  T  T  Y  S  P  S  P  K  S  R  V  T  M  S  I  D  T  S  K  N 
                    Query_2536   91   TGGATTGGTTATATCTCTTACAGTGGGAGCACCACTTATAGCCCCTCCCCCAAGAGTCGAGTCACCATGTCAATAGACACGTCCAAGAAC  180
V  91.2% (219/240)  IGHV4-59*08  139  ........G.......A.................AC..C.A........T..................A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  T  S  G  T  T  L  V  Y  W 
                    Query_2536   181  CAGTTCTCCCTGAGGCTGACGTCTGTGACCGCCGCAGACACGGCCATTTATTACTGTGCGCGGACTAGTGGAACGACTCTTGTGTACTGG  270
V  91.2% (219/240)  IGHV4-59*08  229  .............A.....GC........................G.G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD1-1*01   9    --------------------------------------------------------------------.........-------------  17
J  95.8% (46/48)    IGHJ5*02     4    -------------------------------------------------------------------------------------.....  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  I  L  V  A  V  S  S  
                    Query_2536   271  TTCGACCCCTGGGGCCAGGGAATCCTGGTCGCCGTCTCCTCAG  313
J  95.8% (46/48)    IGHJ5*02     9    ......................C.......A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_108585

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHD3-9*01                                                                                            12.2    31    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGA	ATATTT	CCCACGAGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGACGAATATTTCCCACGAGGCTTTCAGTAC	VRDEYFPRGFQY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2537   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGGCTACTGGATGCACTGGGTCCGCCAAGCACCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-74*01  47   ............................................A............................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  I  I  D  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2537   91   TGTGGGTCTCACGTATTAATAGTGATGGGAGTATCATAGACTCCGCGGATTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-74*01  137  .................................G..C.AG..A......C........................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  E  Y  F  P  R  G  
                    Query_2537   181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGTAAGAGACGAATATTTCCCACGAGGCT  270
V  96.0% (240/250)  IGHV3-74*01  227  .......G.......................................................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-9*01   9    -------------------------------------------------------------------------......-----------  14
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  Q  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2537   271  TTCAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  95.5% (42/44)    IGHJ4*02     7    ..G.C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_108584

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           377     9e-107
IGHD3-3*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTAAA	ACGATTTTTGGAGTGGTTAT	CCATTTGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTAAAACGATTTTTGGAGTGGTTATCCATTTGGGCTACTTTGACTAC	AKVKTIFGVVIHLGYFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	245	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2538   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (245/249)  IGHV3-23*01  47   .....................C....................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  D  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2538   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGATAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  98.4% (245/249)  IGHV3-23*01  137  ..............................G...........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  V  K  T  I  F  G  V  
                    Query_2538   181  AGAACACCCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTTAAAACGATTTTTGGAGTGG  270
V  98.4% (245/249)  IGHV3-23*01  227  .......G....A........................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (20/20)   IGHD3-3*01   6    --------------------------------------------------------------------------................  21

                                      IMGT--------------------->                                  
                                      V  I  H  L  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2538   271  TTATCCATTTGGGCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (20/20)   IGHD3-3*01   22   ....--------------------------------------------------------  25
J  100.0% (47/47)   IGHJ4*02     2    -------------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_108587

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD6-19*01                                                                                           12.2    30   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGACGGGT	TGGCTG	CCC	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGACGGGTTGGCTGCCCGACGAC	ARGTGWLPDD	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  Y  C  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2539   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTACTACTGCAACTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   ...............................G..........A..........G.G..................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  N  T  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2539   91   TGGATTGGACATATCTACAACACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-59*01  139  ........GT.......TT...G.....G.............................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  A  Y  Y  C  A  R  G  T  G  W  L  P  D  D  W 
                    Query_2539   181  CAGTTCTCCTTGAACCTGAACTCTGTGACCGCTGCGGACACGGCCGCGTATTACTGTGCGAGAGGGACGGGTTGGCTGCCCGACGACTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  .........C....G....G..........................T.................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  12   ------------------------------------------------------------------------......------------  17
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------...T.....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_2539   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.5% (39/40)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_108586

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHD2-2*01                                                                                            23.8    0.012 
IGHJ5*01                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATG	GGATATTGTAGCAGT	GTCATCTGTGACGGACCT	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGATATTGTAGCAGTGTCATCTGTGACGGACCTGACTCC	ARHMGYCSSVICDGPDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  S  Y
                    Query_2540   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTTCCAGTTA  90
V  95.5% (278/291)  IGHV5-51*01  6    ....................................C.............................T...............A....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  K  Y  S  P
                    Query_2540   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGAGACGAAATACAGTCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ........G..................................................................T..C.G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2540   181  GTCCTTCCGAGGCCAGGTCACCATATCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  ........A...............C....C...............C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  M  G  Y  C  S  S  V  I  C  D  G  P  D  S  W  G  H  G  T  L  V  T  V
                    Query_2540   271  CATGTATTACTGTGCGAGACATATGGGATATTGTAGCAGTGTCATCTGTGACGGACCTGACTCCTGGGGCCACGGAACCCTGGTCACCGT  360
V  95.5% (278/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  93.3% (14/15)    IGHD2-2*01   2    -------------------------...........T...--------------------------------------------------  16
J  97.5% (39/40)    IGHJ5*01     12   ----------------------------------------------------------..............A.................  43

                                              
                                        S  S  
                    Query_2540   361  CTCCTCAG  368
J  97.5% (39/40)    IGHJ5*01     44   ........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_325964

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           350     8e-99
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGGA	AGCAGTGG	N/A	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGGAAGCAGTGGCTATTACCACGGTATGGACGTC	ARSGSSGYYHGMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2541   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGGAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-33*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  T  N  E  H  Y  I  D  S  V  K  G  R  F  T  I  S  R  E  N  S  
                    Query_2541   91   AGTGGGTGGCCGTTATATGGTATGATGGAACTAATGAACATTATATAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGAGAATTCCA  180
V  95.2% (236/248)  IGHV3-33*01  137  ..........A...................G....A..T.C...GC....................................C.......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  S  G  S  S  G  Y  Y  
                    Query_2541   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGATCGGGAAGCAGTGGCTATTACC  270
V  95.2% (236/248)  IGHV3-33*01  227  ....................................C...............G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  7    --------------------------------------------------------------------------........--------  14
J  96.4% (53/55)    IGHJ6*02     8    ----------------------------------------------------------------------------------...C...T  15

                                      ------------->                                 
                                      H  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2541   271  ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  96.4% (53/55)    IGHJ6*02     16   ...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_91892

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_2542   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTA  90
V  97.6% (282/289)  IGHV5-51*03  6    ..............................................................................C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_2542   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  97.6% (282/289)  IGHV5-51*03  96   .......................................................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2542   181  GTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  ........................C....C....A..................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2542   271  CATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  97.6% (282/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (15/15)   IGHD6-19*01  4    ----------------------------------...............----------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   ----------------------------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_91891

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           402     3e-114
IGHD6-19*01                                                                                           16.1    2.5   
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGTGGGGAAACAGA	AGTGGCTG	CCA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCC	ARLRGETEVAANNWFDP	279	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	10	65	56	53	3	0	94.6
CDR1-IMGT	66	89	24	21	3	0	87.5
FR2-IMGT	90	140	51	50	1	0	98
CDR2-IMGT	141	164	24	23	1	0	95.8
FR3-IMGT	165	278	114	113	1	0	99.1
CDR3-IMGT (germline)	279	284	6	6	0	0	100
Total	N/A	N/A	275	266	9	0	96.7


Alignments

                                      <-----------------------FR1-IMGT-----------------------><-------CDR1-IMGT------><---------
                                         G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  M  G  S  G  Y  T  F  A  G  Y  W  I  A  W  
                    Query_2543   10   CTGGTGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTATGGGATCTGGATACACCTTTGCCGGCTACTGGATCGCCTGGG  99
V  96.7% (266/275)  IGHV5-51*03  20   ....A...........................................A...T..........G....A..A............G.....  109
                                         G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W  I  G  W  

                                      -----------FR2-IMGT---------------------><-------CDR2-IMGT------><------------------------
                                      V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  D  T  R  Y  S  P  S  F  Q  G  
                    Query_2543   100  TGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACTCTGATACCAGATACAGCCCGTCCTTCCAAGGCC  189
V  96.7% (266/275)  IGHV5-51*03  110  .........................................A................................................  199
                                      V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S  F  Q  G  

                                      ----------------------------FR3-IMGT----------------------------------------------------><
                                      Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M  Y  Y  C  
                    Query_2543   190  AGGTCACCATCTCAGCCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGCCATGTATTACTGTG  279
V  96.7% (266/275)  IGHV5-51*03  200  .........................C................................................................  289
                                      Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M  Y  Y  C  

                                      --------------------CDR3-IMGT-------------------->                                 
                                      A  R  L  R  G  E  T  E  V  A  A  N  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_2543   280  CGAGACTTCGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  362
V  96.7% (266/275)  IGHV5-51*03  290  .....------------------------------------------------------------------------------  294
                                      A  R                                                                               
D  100.0% (8/8)     IGHD6-19*01  10   ----------------------........-----------------------------------------------------  17
J  100.0% (50/50)   IGHJ5*02     1    ---------------------------------..................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_91890

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD4-17*01                                                                                           21.8    0.047 
IGHJ2*01                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCC	CTACGGTGACT	TACCCCCT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCCCTACGGTGACTTACCCCCTTACTGGTACTTCGATCTC	ARGPYGDLPPYWYFDL	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	72	3	0	96
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	99	15	0	86.8
CDR3-IMGT (germline)	292	296	5	5	0	0	100
Total	N/A	N/A	293	271	22	0	92.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  S 
                    Query_2544   4    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTTCC  93
V  92.5% (271/293)  IGHV5-51*01  1    .....G........G.......................................................G............C...A..  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  H  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 
                    Query_2544   94   AGCCACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGACACCAGATAC  183
V  92.5% (271/293)  IGHV5-51*01  91   ...T............................................................................T.........  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  P  F  Q  E  Q  V  N  L  S  V  E  K  S  I  T  T  A  Y  L  Q  W  T  S  L  R  P  S  D 
                    Query_2544   184  AGCCCGCCCTTCCAAGAACAGGTCAACCTTTCAGTCGAAAAGTCCATCACCACCGCCTACCTGCAGTGGACCAGCCTGAGGCCCTCGGAC  273
V  92.5% (271/293)  IGHV5-51*01  181  ......T.........GC.......C.A.C....C...C..........G....................G........A.G........  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  G  I  Y  Y  C  A  R  G  P  Y  G  D  L  P  P  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T 
                    Query_2544   274  ACCGGCATATACTACTGTGCGAGGGGCCCCTACGGTGACTTACCCCCTTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACT  363
V  92.5% (271/293)  IGHV5-51*01  271  ....C...G..T...........-------------------------------------------------------------------  293
                                       T  A  M  Y  Y  C  A                                                                      
D  100.0% (11/11)   IGHD4-17*01  4    -----------------------------...........--------------------------------------------------  14
J  100.0% (50/50)   IGHJ2*01     2    ------------------------------------------------..........................................  43

                                              
                                       V  S  S
                    Query_2544   364  GTCTCCTC  371
J  100.0% (50/50)   IGHJ2*01     44   ........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_91897

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD2-2*02                                                                                            12.2    32    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCA	CTGGTATAC	TTACGTCAGCGGGGGATATG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTGGTATACTTACGTCAGCGGGGGATATGTTGACTAC	ARGHWYTYVSGGYVDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2545   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S 
                    Query_2545   91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGCTACCATATCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ................A.................G................................T......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  W  Y  T  Y  V 
                    Query_2545   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCACTGGTATACTTACGTC  270
V  97.6% (244/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (8/9)      IGHD2-2*02   22   --------------------------------------------------------------------------...C.....-------  30

                                      GT------------------>                                  
                                       S  G  G  Y  V  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_2545   271  AGCGGGGGATATGTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  325
J  97.6% (41/42)    IGHJ4*02     7    -------------.............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_325961

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           274     8e-76
IGHD1-1*01                                                                                            10.3    119  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GCAGAACCCCGTTCG	ACGAC	TTAGT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGCAGAACCCCGTTCGACGACTTAGTCTTTGACTTT	AKGRTPFDDLVFDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	212	37	0	85.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  G  T  Y  A  M  T  W  V  R  Q  A  P  G  R  G  L  
                    Query_2546   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGGTTCAGCTTTGGAACTTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAGGGGGCTAG  90
V  85.1% (212/249)  IGHV3-23*01  47   .....................C.........A....C....A.C.GC..........G.......................A......G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  N  R  N  A  T  I  T  D  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2546   91   AGTGGGTCTCAACAATAAATCGAAATGCCACCATCACAGACTACGCAGACTCTTTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  85.1% (212/249)  IGHV3-23*01  137  ...........G.T..T.G.G.T.G..GTGGT.G....T.............CG..........G....................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  N  A  L  Y  L  Q  I  N  S  L  R  D  E  D  T  A  I  Y  F  C  A  K  G  R  T  P  F  D  D  
                    Query_2546   181  GGAACGCCCTCTATCTGCAAATCAACAGCCTGAGAGACGAGGACACGGCCATCTATTTCTGTGCGAAAGGCAGAACCCCGTTCGACGACT  270
V  85.1% (212/249)  IGHV3-23*01  227  A....A.G..G...........G.............C.............G.A....A...........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD1-1*01   13   ------------------------------------------------------------------------------------.....-  17

                                      ------------->                                  
                                      L  V  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2546   271  TAGTCTTTGACTTTTGGGGCCAGGGAACCCTGGTCACAGTCTCCTCAG  318
J  93.2% (41/44)    IGHJ4*02     5    ----........AC.......................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_91895

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-22*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATG	GTATTATTCTGATAACAGTGGTTATT	T	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATGGTATTATTCTGATAACAGTGGTTATTTCTTTGACTCC	AREWYYSDNSGYFFDS	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_2547   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGCCAGTCCCCAGGGAAGGGACTGGAGT  93
V  91.8% (224/244)  IGHV4-59*01  50   .....TCC...A..............................G.....................G...C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  F  V  Y  Y  T  G  F  T  D  Y  N  P  S  L  K  S  R  I  T  I  S  L  D  T  S  K  N  
                    Query_2547   94   GGCTTGGGTTTGTCTATTACACTGGATTCACCGACTACAACCCCTCCCTCAAGAGTCGAATCACCATATCACTAGACACGTCCAAGAACC  183
V  91.8% (224/244)  IGHV4-59*01  140  ..A......A.A.........G...GAG....A..........................G...........G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  W  Y  Y  S  D  N  S  G  
                    Query_2547   184  AGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGAATGGTATTATTCTGATAACAGTGGTT  273
V  91.8% (224/244)  IGHV4-59*01  230  ............A.................................G.....C...........--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  84.6% (22/26)    IGHD3-22*01  1    -------------------------------------------------------------------......C.A.....GT.......  23

                                      ------------->                                  
                                      Y  F  F  D  S  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_2547   274  ATTTCTTTGACTCCTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  321
D  84.6% (22/26)    IGHD3-22*01  24   ...---------------------------------------------  26
J  95.5% (42/44)    IGHJ4*02     5    ----........A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_91894

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           308     4e-86
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ATTTCT	TATGGTTCGGGGAGT	CACGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAATTTCTTATGGTTCGGGGAGTCACGGGTGGTTCGACCCC	ARISYGSGSHGWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	220	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  K  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2548   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAAATACTTCTGGAGTTGGATCCGTCAGCCCCCCGGGAAGGGCCTGGAG  90
V  90.5% (220/243)  IGHV4-59*01  49   ...............................G.........T.GT....A......C........G........A........A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  I  G  T  T  S  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  T  P  K  N 
                    Query_2548   91   TGGATTGGTTACATCTATTACATTGGGACCACCAGCTACAACCCCTCCCTCGAGAGTCGCGTCACCATATCAGTAGACACGCCCAAGAAC  180
V  90.5% (220/243)  IGHV4-59*01  139  ........G..T..........G.....G.....A................A.......A.....................T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  R  A  M  Y  Y  C  A  R  I  S  Y  G  S  G  S  H  G 
                    Query_2548   181  CAGTTCTCCCTGAAGCTAACGTCTGTGACCGCTGCGGACAGGGCCATGTATTACTGTGCGCGAATTTCTTATGGTTCGGGGAGTCACGGG  270
V  90.5% (220/243)  IGHV4-59*01  229  .................G.GC...................C....G..............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (15/15)   IGHD3-10*01  8    ---------------------------------------------------------------------...............------  22

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2548   271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (46/46)   IGHJ5*02     6    ..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_38318

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           389     2e-110
IGHD3-22*01                                                                                           12.2    36    
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-22*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTT	CTATGA	GCAAACTGACTTTAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCTATGAGCAAACTGACTTTATTACTTTGGCTTC	ARLL*AN*LYYFGF	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  E  A  S  G  D  T  F  T  R  Y
                    Query_2549   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCGAGGCATCTGGAGACACCTTCACCAGGTA  90
V  93.1% (269/289)  IGHV1-46*01  6    ..................G..........................................A...........T.............C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  L  Y  W  V  R  Q  A  P  G  Q  G  F  E  W  L  G  V  I  N  P  S  S  G  S  T  S  Y  A  Q
                    Query_2549   91   CTTTCTGTACTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGTGGTTGGGAGTAATAAACCCCAGTAGTGGTAGCACAAGTTACGCACA  180
V  93.1% (269/289)  IGHV1-46*01  96   ..A.A..C.............................C........A.....A....C.....T...G.............C........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        Q  F  Q  G  R  V  T  M  T  R  D  T  S  T  M  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_2549   181  GCAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGATGACAGTGTACATGGAACTGAGCAGCCTAAGATCTGAGGACACGGC  270
V  93.1% (269/289)  IGHV1-46*01  186  .A..........................................GC.....C........G...........G.................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  L  L  *  A  N  *  L  Y  Y  F  G  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2549   271  CGTGTATTACTGTGCGAGACTTCTATGAGCAAACTGACTTTATTACTTTGGCTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.1% (269/289)  IGHV1-46*01  276  ...................----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD3-22*01  7    ----------------------......-------------------------------------------------------------  12
J  95.7% (44/46)    IGHJ4*02     3    -------------------------------------------.......A..A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_170829

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           349     3e-98
IGHD3-16*01                                                                                           18.0    0.64 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	278	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	277	114	95	13	6	83.3
CDR3-IMGT (germline)	278	283	6	6	0	0	100
Total	N/A	N/A	289	258	25	6	89.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P  R  Y
                    Query_2550   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCCGTTA  90
V  89.3% (258/289)  IGHV5-51*03  6    .......................................................T.....A....T..........GC..TA..A.C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_2550   91   TTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGTCC  180
V  89.3% (258/289)  IGHV5-51*03  96   C........C.......................................................G.....................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D  T  A
                    Query_2550   181  GGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACACTGC  264
V  89.3% (258/289)  IGHV5-51*03  186  .T.....C.A...................C...C........CAGCACC.C...............C..C.................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2550   265  CATTTATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  353
V  89.3% (258/289)  IGHV5-51*03  276  ...G........T......----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD3-16*01  18   --------------------........T...---------------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    ---------------------------------------......T......G.................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_241362

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           350     8e-99
IGHD2-15*01                                                                                           25.7    0.003
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GCCG	GGATATTGTAGTG	ATATCAAGTGT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGCCGGGATATTGTAGTGATATCAAGTGTTACTATGGTATGGACCTC	AKEPGYCSDIKCYYGMDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2551   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  94.8% (237/250)  IGHV3-30*18  47   ....................G........................G.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  T  S  Y  D  G  T  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2551   91   AGTGGGTGGCAGTTACATCATATGATGGAACTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCAG  180
V  94.8% (237/250)  IGHV3-30*18  137  ...............T..............G.........................................................CA  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      E  S  T  L  Y  L  H  M  D  P  L  R  A  E  D  T  A  V  Y  Y  C  A  K  E  P  G  Y  C  S  D  
                    Query_2551   181  AGAGCACGCTGTATCTGCATATGGACCCCTTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGAGCCGGGATATTGTAGTGATA  270
V  94.8% (237/250)  IGHV3-30*18  227  ...A...............A...A..AG.C........................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (13/13)   IGHD2-15*01  2    --------------------------------------------------------------------------.............---  14

                                      IMGT--------------------->                                 
                                      I  K  C  Y  Y  G  M  D  L  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2551   271  TCAAGTGTTACTATGGTATGGACCTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  96.1% (49/51)    IGHJ6*02     12   --------.....C.........G...................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_241361

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           290     2e-80
IGHD1-26*01                                                                                           12.2    32   
IGHJ3*01                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARAKGIAVIVDAFDF	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	97	17	0	85.1
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	214	29	0	88.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_2552   4    CCCTGAGACTCTCCTGTTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAGT  93
V  88.1% (214/243)  IGHV4-59*01  50   .....TCC...A....CA.....................G............................C....A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  V  S  V  N  M  S  N  N  
                    Query_2552   94   GGATTGGATATATCTATTACAGAGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAAACATGTCCAACAACC  183
V  88.1% (214/243)  IGHV4-59*01  140  .......G..............T....G.....A......C.....CC................CA.A......G...C......G....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  K  G  I  A  V  I  V  D  
                    Query_2552   184  GGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGTGCGAGAGCTAAGGGTATCGCTGTTATAGTAGATG  273
V  88.1% (214/243)  IGHV4-59*01  230  A...........AG.................T.......CG.....G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD1-26*01  3    -------------------------------------------------------------------------------......-----  8
J  93.9% (46/49)    IGHJ3*01     2    --------------------------------------------------------------------------------------....  5

                                      ---------->                                  
                                      A  F  D  F  W  G  Q  G  R  M  V  T  V  S  T  
                    Query_2552   274  CTTTTGATTTCTGGGGCCAAGGGAGAATGGTCACCGTCTCTACAG  318
J  93.9% (46/49)    IGHJ3*01     6    ........G...............C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_241360

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGCG	GGCTGG	N/A	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCTGGCAATTGGTTCGACCCC	ARGRRAGNWFDP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2553   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTGGGGCTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  92.8% (232/250)  IGHV4-31*01  49   .........................................C.....T.G............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  E  R  T  Q  Y  N  P  S  L  K  N  Q  V  T  I  S  G  D  T  S 
                    Query_2553   91   CTGGAGTGGATTGGATACATCTATTACGGTGAGAGAACCCAGTACAACCCGTCCCTCAAGAATCAAGTGACCATATCAGGAGACACGTCT  180
V  92.8% (232/250)  IGHV4-31*01  139  ..............G............A...G...C...T.C...................G..T...T..........T..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       T  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  W 
                    Query_2553   181  ACAAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCTGGCAATTGG  270
V  92.8% (232/250)  IGHV4-31*01  229  .AG................A.................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------......-------  18
J  94.0% (47/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------...C...  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  I  L  V  T  V  T  S  
                    Query_2553   271  TTCGACCCCTGGGGCCAGGGAATCCTGGTCACCGTCACCTCAG  313
J  94.0% (47/50)    IGHJ5*02     9    ......................C.............T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_241367

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGCCGAAACC	GTATTACGACTTTTGGA	ATCCTTATTCTCGGCTCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCGAAACCGTATTACGACTTTTGGAATCCTTATTCTCGGCTCCTTCGACCCC	ARGGRNRITTFGILILGSFDP	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_2554   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGATCATTATTGGAGCTGGATCCGCCAGTCTCCAGGGAAGGGGCTGGAA  90
V  93.1% (228/245)  IGHV4-34*01  49   ...........................................G.T.C..C..................C.C.................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_2554   91   TGGATTGGGGAGATCAACCATAGTGGAAGCACCAACTACAACCCGTCTCTCAAGAGTCGAGTCACCATATCAGCGGACACGTCTAAGAAC  180
V  93.1% (228/245)  IGHV4-34*01  139  ...........A.....T.............................C.........................TA........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  K  L  I  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  G  R  N  R  I  T  T  F 
                    Query_2554   181  CAGTTCTCCCTGAAGCTGATCTCTGTGACCGCCGCAGACACGGCTGTATATTTCTGTGCGAGAGGGGGCCGAAACCGTATTACGACTTTT  270
V  93.1% (228/245)  IGHV4-34*01  229  ...................G...............G...........G....A............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  94.1% (16/17)    IGHD3-3*01   1    ----------------------------------------------------------------------------.........T....  14

                                      MGT-------------------------->                                  
                                       G  I  L  I  L  G  S  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_2554   271  GGAATCCTTATTCTCGGCTCCTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  334
D  94.1% (16/17)    IGHD3-3*01   15   ...-------------------------------------------------------------  17
J  97.7% (42/43)    IGHJ5*02     9    ---------------------.........................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_241366

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*04                                                                                           296     2e-82
IGHD2-21*01                                                                                           10.3    124  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*04	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATAAAGACCCCGGAGGGCGC	CTATT	TCTCG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATAAAGACCCCGGAGGGCGCCTATTTCTCGTACTACGGTATGGACGTC	ARIKTPEGAYFSYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	218	29	0	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  I  A  S  G  F  T  F  S  D  F  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2555   1    GGTCCCTGAGACTCTCCTGTATAGCCTCTGGATTCACCTTCAGTGATTTTACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGC  90
V  88.3% (218/247)  IGHV3-21*04  47   ....................GC......................AGC.A..G.................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  S  S  G  T  Y  T  Y  Y  A  D  S  L  Q  G  R  F  T  I  A  R  D  N  A  
                    Query_2555   91   AGTGGGTGTCATCCATTAGTAGTAGTGGGACTTACACATACTACGCAGACTCACTTCAGGGCCGATTCACCATCGCCAGAGACAACGCCA  180
V  88.3% (218/247)  IGHV3-21*04  137  .......C..................A.T.G.....T................G.GA.................T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  R  S  L  Y  L  Q  V  N  S  L  R  T  E  D  T  G  I  Y  Y  C  A  R  I  K  T  P  E  G  A  
                    Query_2555   181  AGAGGTCTCTGTATCTCCAAGTGAACAGCCTGAGAACCGAGGACACCGGCATATATTATTGTGCGAGGATAAAGACCCCGGAGGGCGCCT  270
V  88.3% (218/247)  IGHV3-21*04  227  ...AC..A........G...A..............G..........G.C.G.G.....C........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  22   ----------------------------------------------------------------------------------------..  23

                                      IMGT--------------------->                              
                                      Y  F  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_2555   271  ATTTCTCGTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  326
D  100.0% (5/5)     IGHD2-21*01  24   ...-----------------------------------------------------  26
J  100.0% (48/48)   IGHJ6*02     12   --------................................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_249178

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            315     5e-88
IGHD3-16*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCAGCCTGATCGGGACAG	TGCTTAT	N/A	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCAGCCTGATCGGGACAGTGCTTATTAC	ASQPDRDSAYY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	21	8	0	72.4
CDR1-IMGT	30	56	27	22	5	0	81.5
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	224	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  I  S  G  V  S  F  S  R  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_2556   1    GGTCCCTGAGACTCTCCTGTGCTATATCTGGTGTCTCCTTCAGTAGAAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGAC  90
V  90.7% (224/247)  IGHV4-4*02   47   ..A.....TCC...A....C...G.C.......G....A....C..T.G.......................................G.  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  S  D  S  G  S  T  N  Y  N  E  S  L  K  S  R  V  T  I  S  I  D  K  S  
                    Query_2556   91   TGGAGTGGATTGGGGAAATCTCTGATAGTGGGAGCACCAACTACAACGAGTCTCTCAAGAGTCGAGTCACCATATCAATAGACAAGTCCA  180
V  90.7% (224/247)  IGHV4-4*02   137  .....................A.C.......................CC...C........................G............  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  H  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  Q  P  D  R  D  S  A  
                    Query_2556   181  AGAACCAATTCTCCCTGCATCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGCCAGCCTGATCGGGACAGTGCTT  270
V  90.7% (224/247)  IGHV4-4*02   227  .......G.........A.G...............................................-----------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  28   -------------------------------------------------------------------------------------.....  32

                                      ---->                                  
                                      Y  Y  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_2556   271  ATTACTGGGGCCAGGGAACCCTGGCCACCGTCTCCTCAG  309
D  100.0% (7/7)     IGHD3-16*01  33   ..-------------------------------------  34
J  97.3% (36/37)    IGHJ4*02     12   --......................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_241364

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           310     1e-86
IGHD4-17*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	GACTACG	TAGAGATGGCTTCGAGAACCAATATGGGAGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTACGTAGAGATGGCTTCGAGAACCAATATGGGAGATTTGACTAC	ARLRRDGFENQYGRFDY	237	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	236	114	101	7	6	88.6
CDR3-IMGT (germline)	237	240	4	4	0	0	100
Total	N/A	N/A	246	224	16	6	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2557   1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTGGATTCACCTTTAGTAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (224/246)  IGHV3-23*01  47   .....................C..C..................C..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  T  G  G  S  T  F  Y  A  A  S  V  K  G  R  Y  T  I  S  R  D  N  S  
                    Query_2557   91   AGTGGGTCTCAGGTATTAGCGGCACTGGTGGTAGTACATTCTACGCGGCCTCCGTGAAGGGCCGGTACACCATCTCCAGAGACAATTCCA  180
V  91.1% (224/246)  IGHV3-23*01  137  ............C......T..T.G.........C....A......A.A.................T.......................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K        V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  L  R  R  D  G  F  E  
                    Query_2557   181  A------GGTCTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAGACTACGTAGAGATGGCTTCGAGA  264
V  91.1% (224/246)  IGHV3-23*01  227  .GAACAC.C.G.......................................G...............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD4-17*01  2    ------------------------------------------------------------------.......-----------------  8

                                      GT-------------------->                                  
                                      N  Q  Y  G  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2557   265  ACCAATATGGGAGATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_115639

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           380     1e-107
IGHD1-1*01                                                                                            14.1    8.2   
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGATG	GGTACAA	TCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGGGTACAATCCTTACTTTGACTAC	ARDDGYNPYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	247	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2558   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGCTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (247/251)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  L  I  D  T  S 
                    Query_2558   91   CTGGAGTGGATTGGCTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATTAATAGACACGTCT  180
V  98.4% (247/251)  IGHV4-31*03  139  ..............G.............................................................C.G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  D  G  Y  N  P  Y 
                    Query_2558   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGATGGGTACAATCCTTAC  270
V  98.4% (247/251)  IGHV4-31*03  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD1-1*01   1    ----------------------------------------------------------------------------.......-------  7
J  100.0% (46/46)   IGHJ4*02     3    ---------------------------------------------------------------------------------------...  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2558   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (46/46)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_170820

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           344     6e-97
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	N/A	N/A	CCCCGCATCGCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCCGCATCGCGTTTTGACTAC	ARGPASRFDY	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	232	12	0	95.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  F  G  G  S  F  R  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_2559   4    CCCTGAGACTCTCCTGCGCTGTCTTTGGTGGGTCCTTCAGGGGGTCCTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  95.1% (232/244)  IGHV4-34*01  50   .....TCC...A............A...............T..T.A............................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N  
                    Query_2559   94   GGATTGGGGAAATCAATCATAGTGGAAGCACCAATTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAACC  183
V  95.1% (232/244)  IGHV4-34*01  140  ..................................C....................................G..................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------CDR3-IMGT--------->    
                                      Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  P  A  S  R  F  D  Y  W  
                    Query_2559   184  AGTTCTCCCTGAAGCTGAGCTCTGTGTCCGCCGCGGACACGGCTGTATATTACTGTGCGAGAGGCCCCGCATCGCGTTTTGACTACTGGG  273
V  95.1% (232/244)  IGHV4-34*01  230  ..........................A...................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
J  100.0% (43/43)   IGHJ4*02     6    -----------------------------------------------------------------------------.............  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_2559   274  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (43/43)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_241369

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            422     2e-120
IGHD3-9*01                                                                                            18.0    0.66  
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGTCAT	TTACGATAT	ACGGGCCGGGT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTCATTTACGATATACGGGCCGGGTCTGGTTCGACCCC	ARGGHLRYTGRVWFDP	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  Y
                    Query_2560  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGACTA  90
V  96.6% (280/290)  IGHV1-2*04  6    ..................G...................................................................G...  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  D  P  N  S  G  G  T  K  Y  A  Q
                    Query_2560  91   CTATGTGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCGACCCTAACAGTGGTGGCACAAAGTATGCACA  180
V  96.6% (280/290)  IGHV1-2*04  96   ....A..............................................A......A......................C........  185
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  N  R  L  R  S  D  D  T  A
                    Query_2560  181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAACTGAACAGACTGAGATCTGACGACACGGC  270
V  96.6% (280/290)  IGHV1-2*04  186  ............................................................G....G...G....................  275
                                       K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                     ------------><-------------------CDR3-IMGT------------------>                             
                                       V  Y  Y  C  A  R  G  G  H  L  R  Y  T  G  R  V  W  F  D  P  W  G  Q  G  D  L  V  T  V  S
                    Query_2560  271  CGTATATTACTGTGCGAGAGGGGGTCATTTACGATATACGGGCCGGGTCTGGTTCGACCCCTGGGGCCAGGGAGACCTGGTCACCGTCTC  360
V  96.6% (280/290)  IGHV1-2*04  276  ...G................----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                        
D  100.0% (9/9)     IGHD3-9*01  4    ----------------------------.........-----------------------------------------------------  12
J  95.7% (45/47)    IGHJ5*02    5    ------------------------------------------------.........................AC...............  46

                                          
                                       S  
                    Query_2560  361  CTCAG  365
J  95.7% (45/47)    IGHJ5*02    47   .....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_241368

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD3-16*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_2561   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (227/249)  IGHV4-61*01  49   .......................C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S 
                    Query_2561   91   CTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  91.2% (227/249)  IGHV4-61*01  139  ....A.........GT............G......CAC..A.........................G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y 
                    Query_2561   181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTAT  270
V  91.2% (227/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------------.....  28

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_2561   271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
D  100.0% (7/7)     IGHD3-16*02  29   ..--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_249172

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           420     7e-120
IGHD2-2*01                                                                                            21.8    0.047 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAGTAGTGAA	TACCAGCTGCT	GTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCC	ARSSSEYQLLFWFDP	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	281	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_2562   4    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCA  93
V  95.9% (281/293)  IGHV5-51*03  2    ....G.....G..........................................................G............C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  
                    Query_2562   94   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATATATCCTGGTGACTCTGATGCCAGATATA  183
V  95.9% (281/293)  IGHV5-51*03  92   .............................................................C..................A.......C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  K  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_2562   184  GTCCGTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTCAAGGCCTCGGACA  273
V  95.9% (281/293)  IGHV5-51*03  182  .C.........C.....................C..........................................G.............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  Y  C  A  R  S  S  S  E  Y  Q  L  L  F  W  F  D  P  W  G  Q  G  T  L  V  T  V  
                    Query_2562   274  CCGCCATGTATTATTGTGCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCA  363
V  95.9% (281/293)  IGHV5-51*03  272  .............C.........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (11/11)   IGHD2-2*01   16   -----------------------------------...........--------------------------------------------  26
J  97.9% (46/47)    IGHJ5*02     5    -------------------------------------------------........................................T  45

                                            
                                      T  S  
                    Query_2562   364  CCTCAG  369
J  97.9% (46/47)    IGHJ5*02     46   ......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_249170

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*03                                                                                           330     1e-92
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GGACG	ATATCAGCACCTGGTA	AG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGGGACGATATCAGCACCTGGTAAGGACTAC	VRGTISAPGKDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2563   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACCTTCAGTACCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-74*03  47   ............................T................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  V  D  G  D  G  R  I  T  Q  Y  A  D  S  V  K  G  R  F  T  M  S  R  D  N  A  
                    Query_2563   91   TTTGGGTCTCACGTGTGGATGGTGATGGACGTATCACACAGTACGCGGACTCCGTGAAGGGCCGATTCACCATGTCCAGAGACAACGCCA  180
V  92.4% (230/249)  IGHV3-74*03  137  .G............A.TA..A.......GA...G....AC.................................C................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  D  L  N  S  L  R  T  E  D  T  A  V  Y  Y  C  V  R  G  T  I  S  A  P  G  
                    Query_2563   181  AGAACACACTGTATCTGGATTTGAACAGTCTGAGAACCGAGGACACGGCTGTGTATTACTGTGTAAGAGGGACGATATCAGCACCTGGTA  270
V  92.4% (230/249)  IGHV3-74*03  227  .......G.........C.AA..............G...........................C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD6-13*01  5    --------------------------------------------------------------------------...G.....G......  20

                                      ------->                                  
                                      K  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2563   271  AGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (40/40)   IGHJ4*02     9    --........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_249171

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            344     6e-97
IGHD3-10*01                                                                                           10.3    125  
IGHJ3*01                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GAAT	TTATA	N/A	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGAATTTATAATGGTTTTGATTTC	ARGIYNGFDF	269	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	38	7	0	84.4
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	154	27	21	6	0	77.8
FR3-IMGT	155	268	114	105	9	0	92.1
CDR3-IMGT (germline)	269	275	7	7	0	0	100
Total	N/A	N/A	274	247	27	0	90.1


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  L  I  T  C  D  I  T  R  D  S  V  S  S  N  T  V  A  W  N  W  I  R 
                    Query_2564   2    CTGGTGAAACCCACACAGACCCTCTTAATCACCTGTGACATCACCAGGGACAGTGTCTCTAGTAACACTGTTGCTTGGAATTGGATCAGG  91
V  90.1% (247/274)  IGHV6-1*01   31   ........G...T.G..........C.C.........C....T..G................C....G..C.........C.........  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  R  S  D  Y  A  P  S  V  K  S  R 
                    Query_2564   92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATATTACAGATCCAAGTGGCGTTCTGACTATGCACCATCTGTGAAAAGTCGG  181
V  90.1% (247/274)  IGHV6-1*01   121  .........................................C.....G.........TA.AA...T......GT...............A  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  V  N  P  D  T  S  K  N  Q  F  S  L  H  L  N  S  V  T  P  E  D  T  A  I  Y  Y  C  A 
                    Query_2564   182  ATAACCGTCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTATTTATTATTGTGCA  271
V  90.1% (247/274)  IGHV6-1*01   211  ......A.....................................G..............................G.G.....C......  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------CDR3-IMGT--------->                                  
                                       R  G  I  Y  N  G  F  D  F  W  G  P  G  T  S  V  T  V  S  S  
                    Query_2564   272  AGAGGAATTTATAATGGTTTTGATTTCTGGGGCCCAGGGACATCGGTCACCGTCTCTTCAG  332
V  90.1% (247/274)  IGHV6-1*01   301  ....---------------------------------------------------------  304
                                       R                                                           
D  100.0% (5/5)     IGHD3-10*01  25   --------.....------------------------------------------------  29
J  89.6% (43/48)    IGHJ3*01     3    -------------...C.......G.........A.......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_227828

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            367     5e-104
IGHD6-19*01                                                                                           18.0    0.57  
IGHJ4*02                                                                                              54.5    1e-11 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	CAAGG	AGTGCCTGGTAC	GGTGGG	GACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGCAAGGAGTGCCTGGTACGGTGGGGACCAC	AGARSAWYGGDH	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  D  Y  W  M  I  W  V  R  Q  A  P  G  K  G  L  
                    Query_2565   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACTGACTATTGGATGATCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-7*03   47   ..........................................G.AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  A  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2565   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGCGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (242/249)  IGHV3-7*03   137  ......................................................T...................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  G  A  R  S  A  W  Y  G  
                    Query_2565   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCCGTGTATTACTGTGCGGGAGCAAGGAGTGCCTGGTACGGTG  270
V  97.2% (242/249)  IGHV3-7*03   227  ........................................G........................A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD6-19*01  10   --------------------------------------------------------------------------....G.......----  21

                                      ------->                                  
                                      G  D  H  W  G  Q  G  A  L  L  T  V  S  S  
                    Query_2565   271  GGGACCACTGGGGCCAGGGAGCCCTACTCACCGTCTCCTCAG  312
J  90.0% (36/40)    IGHJ4*02     9    --...T..............A....GG...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_227829

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           357     1e-100
IGHD7-27*01                                                                                           16.1    2.2   
IGHJ2*01                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD7-27*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCAA	CCC	ACTGGGGA	TCGGGGGCGTC	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACCCACTGGGGATCGGGGGCGTCCTTCGATCTC	ATHWGSGASFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	237	9	0	96.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2566   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAACTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.3% (237/246)  IGHV3-74*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  E  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2566   91   TGTGGGTCTCACGTATCAATAGTGATGAGAGTAGCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.3% (237/246)  IGHV3-74*01  137  ................T..........G...........G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  F  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  T  H  W  G  S  G  A  S  
                    Query_2566   181  AGAACACGCTGTTCCTGCAGATGAACGGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAACCCACTGGGGATCGGGGGCGTCCT  270
V  96.3% (237/246)  IGHV3-74*01  227  ............AT.....A......A.........................G.............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD7-27*01  4    ---------------------------------------------------------------------........-------------  11
J  100.0% (44/44)   IGHJ2*01     10   ----------------------------------------------------------------------------------------..  11

                                      ------->                                  
                                      F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2566   271  TCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  312
J  100.0% (44/44)   IGHJ2*01     12   ..........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_227820

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           371     8e-105
IGHD1-26*01                                                                                           10.3    144   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTGTGAATAGAGAGAGGCCAAAG	GTGGG	CTTTGAGTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTGTGAATAGAGAGAGGCCAAAGGTGGGCTTTGAGTTCTACGATATGGACGTC	ARAVNRERPKVGFEFYDMDV	292	351	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	70	5	0	93.3
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	46	5	0	90.2
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	103	11	0	90.4
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	295	266	29	0	90.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  R  R  P  G  S  S  V  R  V  S  C  K  A  S  G  D  S  F  S 
                    Query_2567   4    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAGGCCTGGGTCCTCGGTGAGGGTCTCCTGTAAGGCTTCTGGAGACAGCTTCAGC  93
V  90.2% (266/295)  IGHV1-69*06  1    .......................G..........A..A.................A.........C.............G..C.......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  S  A  V  S  W  V  R  Q  A  P  G  Q  G  L  Q  W  M  G  G  I  T  P  V  F  G  T  P  N  Y 
                    Query_2567   94   ACCTCTGCTGTCAGTTGGGTGCGGCAGGCCCCTGGACAAGGACTTCAGTGGATGGGAGGGATCACCCCTGTCTTTGGCACACCAAACTAC  183
V  90.2% (266/295)  IGHV1-69*06  91   .G..A....A....C........A.................G...G..................T....A.......T...G........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  P  N  F  Q  A  R  V  T  I  T  A  D  K  S  T  S  T  V  Y  M  E  L  T  R  L  T  S  E  D 
                    Query_2567   184  GCACCGAACTTCCAGGCCAGAGTCACGATTACCGCGGACAAATCCACGAGTACAGTCTATATGGAGCTGACCAGACTGACATCTGAGGAC  273
V  90.2% (266/295)  IGHV1-69*06  181  ....A...G.......G.................................C....C...C..........G...C....G..........  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  M  Y  Y  C  A  R  A  V  N  R  E  R  P  K  V  G  F  E  F  Y  D  M  D  V  W  G  Q  G 
                    Query_2567   274  ACGGCCATGTATTATTGTGCGAGAGCTGTGAATAGAGAGAGGCCAAAGGTGGGCTTTGAGTTCTACGATATGGACGTCTGGGGCCAAGGG  363
V  90.2% (266/295)  IGHV1-69*06  271  ......G.......C..........-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD1-26*01  7    ------------------------------------------------.....-------------------------------------  11
J  95.9% (47/49)    IGHJ6*02     14   --------------------------------------------------------------.....G......................  41

                                                           
                                       T  T  V  I  V  S  S 
                    Query_2567   364  ACCACGGTCATCGTCTCCTCA  384
J  95.9% (47/49)    IGHJ6*02     42   ..........C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_227822

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            353     9e-100
IGHD2-2*01                                                                                            16.1    2.2   
IGHJ5*01                                                                                              62.2    6e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGG	GTAGTAGT	TCGTCGATTTGGTC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGTAGTAGTTCGTCGATTTGGTCCTGGTTCGACTTT	AKGSSSSIWSWFDF	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	235	9	0	96.3


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_2568  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  96.3% (235/244)  IGHV4-4*01  49   ..........................................................................................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  K  I  Y  H  S  G  N  T  N  Y  N  P  S  L  E  S  R  A  T  V  S  V  D  K  S  K 
                    Query_2568  91   GAGTGGATTGGAAAAATCTATCATAGTGGGAACACCAACTACAACCCGTCCCTCGAGAGTCGAGCCACCGTATCAGTAGACAAGTCCAAG  180
V  96.3% (235/244)  IGHV4-4*01  139  ...........GG..................G......................A.........T....A....................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  G  S  S  S  S  I  W  S 
                    Query_2568  181  AACCAGTTCTCCCTGAAACTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAAGGGTAGTAGTTCGTCGATTTGGTCC  270
V  96.3% (235/244)  IGHV4-4*01  229  .................G.....C...............................G........--------------------------  292
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  100.0% (8/8)     IGHD2-2*01  9    -------------------------------------------------------------------........---------------  16
J  89.4% (42/47)    IGHJ5*01    5    -----------------------------------------------------------------------------------------.  5

                                     ----------->                                  
                                      W  F  D  F  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_2568  271  TGGTTCGACTTTTGGGGCCAGGGAATCCTGGTCACTGTCTCCTCAG  316
J  89.4% (42/47)    IGHJ5*01    6    ..........CC........A....C.........C..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_227823

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  N  N  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2569   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-23*01  47   .....................C....................G..G.T.....A....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  L  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_2569   91   AGTGGGTCTCAGCGATTCTTGGGAGCGGTAGTAGCACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  .............T...AG...T..T...G..............G......................................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_2569   181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  93.2% (233/250)  IGHV3-23*01  227  ...............................G....................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2569   271  ATTCACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_227824

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           294     6e-82
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGGGTCCT	TATAGTGGGAGC	CCGCAAGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACTTC	AKPGPYSGSPQGYFDF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	9	2	0	81.8
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	49	2	0	96.1
CDR2-IMGT	100	123	24	16	8	0	66.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	230	209	21	0	90.9


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  V  S  G  F  T  F  S  T  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I  
                    Query_2570   14   GTACAGTCTCTGGATTCACCTTTAGCACCTTCGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAACTATTA  103
V  90.9% (209/230)  IGHV3-23*01  65   ..G...C....................G..AT........C..........................................G......  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      T  E  T  G  R  N  S  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  K  N  T  L  Y  L  
                    Query_2570   104  CTGAGACTGGTCGTAATTCATACTACGCAGACTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCAAGAACACACTGTATCTGT  193
V  90.9% (209/230)  IGHV3-23*01  155  G..GT.G....G...GCA............................G....C...............T...........G.........C  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      *  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  G  P  Y  S  G  S  P  Q  G  Y  F  D  
                    Query_2570   194  AAATGAACACCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACT  283
V  90.9% (209/230)  IGHV3-23*01  245  .........G........................................----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (12/12)   IGHD1-26*01  3    -----------------------------------------------------------............-------------------  14
J  97.8% (45/46)    IGHJ4*02     3    --------------------------------------------------------------------------------..........  12

                                      ->                                  
                                      F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2570   284  TCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  97.8% (45/46)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_227827

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCGG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGGAACTGGTTCGACCCC	ARGGWRRQRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	219	26	0	89.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  F  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_2571   1    ACCCTGTCCCTCACCTGCGCTGTGTTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  89.4% (219/245)  IGHV4-34*01  49   .......................C.A..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  T  R  Y  N  P  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_2571   91   TGGATTGGGGAAATCAGTCATAGTGGAAGTACGAGGTACAACCCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAG  180
V  89.4% (219/245)  IGHV4-34*01  139  ................A............C..C.AC.........T......A...............A....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  I  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W 
                    Query_2571   181  CAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTATATATTACTGTGCGCGAGGGGGCTGGCGAAGACAGCGGAACTGG  270
V  89.4% (219/245)  IGHV4-34*01  229  ..GT...........C..A......T...................G.G............A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2571   271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (48/49)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_345603

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           305     3e-85
IGHD3-10*01                                                                                           39.1    2e-07
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	G	ACTATGGAACGGGGAGTTATTATAAC	AAGACCC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACTATGGAACGGGGAGTTATTATAACAAGACCCATGGACGTC	AKTMERGVIITRPMDV	237	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	20	4	0	83.3
FR3-IMGT	123	236	114	105	9	0	92.1
CDR3-IMGT (germline)	237	241	5	5	0	0	100
Total	N/A	N/A	229	212	17	0	92.6


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  S  F  S  H  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_2572   13   GTGCAGTCTCTGGATTCAGCTTCAGTCACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATAG  102
V  92.6% (212/229)  IGHV3-30*18  65   ......C...........C.......AG.............................................................T  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      A  Y  D  E  S  F  K  S  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  R  S  T  L  Y  L  
                    Query_2572   103  CATATGATGAAAGTTTTAAATCTTACGCAGCCTCCGTGAAGGGCCGATTTACCATCTCCAGAGACAATTCCAGGAGCACGCTGTATCTGC  192
V  92.6% (212/229)  IGHV3-30*18  155  .........G....AA.....AC..T....A..................C......................A..A..............  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  K  T  M  E  R  G  V  I  I  T  R  P  M  D  
                    Query_2572   193  AAATGAACAGCCTGAGAGATGAGGACACGGCTGTGTATTATTGTGCGAAGACTATGGAACGGGGAGTTATTATAACAAGACCCATGGACG  282
V  92.6% (212/229)  IGHV3-30*18  245  ..................C.....................C........-----------------------------------------  293
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  92.3% (24/26)    IGHD3-10*01  6    --------------------------------------------------.......TT.................--------------  31
J  97.6% (41/42)    IGHJ6*02     21   -----------------------------------------------------------------------------------.......  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2572   283  TCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  317
J  97.6% (41/42)    IGHJ6*02     28   ...............................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_54803

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            310     1e-86
IGHD2-21*01                                                                                           18.0    0.60 
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-21*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CAAGAATTACAAGTT	TGGTGATGATCGCTA	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGGGACAAGAATTACAAGTTTGGTGATGATCGCTACTATGATGCATTTGATTTG	TRDKNYKFGDDRYYDAFDL	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  T  Y  W  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_2573   1    GGTCCCTGAGACTCTCCTGTGCTGCCTCAGGTTTCACCTTTGGCACCTATTGGATGACATGGATCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  89.6% (224/250)  IGHV3-7*01   47   ......................A.....T..A.........A.T.G...........GC...G......................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  G  D  G  S  K  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2573   91   AGTGGGTGGCCAATATAAAAGGAGATGGAAGTAAGACATACTATGTGGATTCTGTGAAGGGCCGCTTCACCATCTCCAGAGACAATGCCA  180
V  89.6% (224/250)  IGHV3-7*01   137  .............C.....GCA..........G...A............C..............A....................C....  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  F  Y  Y  C  T  R  D  K  N  Y  K  F  G  
                    Query_2573   181  GGAACTCACTGTATCTGCAAATGAACAGCCTCAGAGTCGAGGACACGGCTTTTTATTACTGTACGAGGGACAAGAATTACAAGTTTGGTG  270
V  89.6% (224/250)  IGHV3-7*01   227  A..............................G....C.............G.G.........G....A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD2-21*01  10   -------------------------------------------------------------------------------------.....  14

                                      -IMGT----------------------->                                  
                                      D  D  R  Y  Y  D  A  F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2573   271  ATGATCGCTACTATGATGCATTTGATTTGTGGGGCCAAGGGACAATGGTCACCGTCTCCTCAG  333
D  86.7% (13/15)    IGHD2-21*01  15   G....T....-----------------------------------------------------  24
J  92.0% (46/50)    IGHJ3*01     1    -------------......T......G.C.............................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_288529

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           367     6e-104
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2574   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2574   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.2% (242/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_2574   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  97.2% (242/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_2574   271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_95266

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           349     3e-98
IGHD2-21*01                                                                                           14.1    9.6  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAACGCTGG	GGTGATT	ATCGGCAGGATGGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCAACGCTGGGGTGATTATCGGCAGGATGGCCTTGACTAC	ASQRWGDYRQDGLDY	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	71	4	0	94.7
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	94	20	0	82.5
CDR3-IMGT (germline)	292	296	5	5	0	0	100
Total	N/A	N/A	293	258	35	0	88.1


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  S  S  G  G  N  L  S 
                    Query_2575   4    CAGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGTCTTCTGGAGGCAACCTCAGC  93
V  88.1% (258/293)  IGHV1-69*06  1    .....G.................G..T..........................................G............C.T.....  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  T  L  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  L  F  G  A  I  N  D 
                    Query_2575   94   AGCTATACTCTCAATTGGGTGCGACAGGCGCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTCTCTTTGGTGCAATAAACGAC  183
V  88.1% (258/293)  IGHV1-69*06  91   ......G..A...GC..............C.......................................A........A..GC....T..  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  S  F  Q  G  R  V  K  L  T  A  D  K  S  S  G  T  V  Y  M  E  L  S  S  R  A  S  D  G 
                    Query_2575   184  GCTCAGAGCTTCCAGGGCAGAGTCAAGCTGACCGCGGACAAATCGTCGGGAACAGTCTACATGGAGCTGAGCAGCCGGGCATCTGACGGC  273
V  88.1% (258/293)  IGHV1-69*06  181  ..A....AG................C.A.T..............CA..A.C....C....................T.AG......G.A.  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       A  A  V  Y  Y  C  A  S  Q  R  W  G  D  Y  R  Q  D  G  L  D  Y  W  G  Q  G  T  L  V  S  V 
                    Query_2575   274  GCGGCCGTCTATTATTGTGCGAGTCAACGCTGGGGTGATTATCGGCAGGATGGCCTTGACTACTGGGGCCAGGGGACCCTGGTCTCCGTC  363
V  88.1% (258/293)  IGHV1-69*06  271  A.......G.....C........-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (7/7)     IGHD2-21*01  14   ---------------------------------.......--------------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    -------------------------------------------------------...................A.........A.....  41

                                             
                                       S  S  
                    Query_2575   364  TCCTCAG  370
J  95.2% (40/42)    IGHJ4*02     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_103609

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           427     1e-121
IGHD3-3*01                                                                                            33.4    2e-05 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTACCCGACGAGGCGG	TTTTTGGAGTGGTTATT	CCCC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTACCCGACGAGGCGGTTTTTGGAGTGGTTATTCCCCCAACTGGTCCGACCCC	ARVTRRGGFWSGYSPNWSDP	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  T  F  T  S  Y 
                    Query_2576   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACTTCTGGTTACACCTTTACCAGTTAT  91
V  97.2% (281/289)  IGHV1-18*01  7    ...............................................................G......................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_2576   92   GGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGTTGGGATGGATCAGCGGTTACAATGGTAATACAAACTATGCACAG  181
V  97.2% (281/289)  IGHV1-18*01  97   .......G.....................................A...............C............C...............  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  V  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_2576   182  AGGGTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  97.2% (281/289)  IGHV1-18*01  187  .A.C......................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------CDR3-IMGT------------------------>                  
                                       V  Y  Y  C  A  R  V  T  R  R  G  G  F  W  S  G  Y  S  P  N  W  S  D  P  W  G  Q  G  T  L 
                    Query_2576   272  GTGTATTACTGTGCGAGAGTTACCCGACGAGGCGGTTTTTGGAGTGGTTATTCCCCCAACTGGTCCGACCCCTGGGGCCAGGGAACCCTG  361
V  97.2% (281/289)  IGHV1-18*01  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (17/17)   IGHD3-3*01   10   -----------------------------------.................--------------------------------------  26
J  96.0% (48/50)    IGHJ5*02     2    --------------------------------------------------------........T.........................  35

                                                      
                                       V  T  V  S  S  
                    Query_2576   362  GTCACCGTCTCTTCAG  377
J  96.0% (48/50)    IGHJ5*02     36   ...........C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_103608

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           419     2e-119
IGHD7-27*01                                                                                           14.1    9.8   
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTCTCTACAGAACCGTCCTATGGGACA	CTAACTG	TGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCC	ARDPFSTEPSYGTLTVRFDP	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_2577   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAT  91
V  96.2% (279/290)  IGHV1-18*01  7    .....................................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       P  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  D  T  N  Y  A  Q 
                    Query_2577   92   CCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTGACACAAATTATGCACAG  181
V  96.2% (279/290)  IGHV1-18*01  97   GG..........................................................G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  D  L  R  S  L  T  S  D  D  T  A 
                    Query_2577   182  AAGTTCCAGGGCAGAGTCACCTTGACCACAGACACGTCCACGAGCACAGCCTACATGGACCTGAGGAGCCTGACATCTGACGACACGGCC  271
V  96.2% (279/290)  IGHV1-18*01  187  ...C.................A.............A.......................G.............G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------CDR3-IMGT------------------------>                  
                                       V  Y  Y  C  A  R  D  P  F  S  T  E  P  S  Y  G  T  L  T  V  R  F  D  P  W  G  Q  G  T  L 
                    Query_2577   272  GTGTATTACTGTGCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCCTGGGGCCAGGGAACCCTG  361
V  96.2% (279/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (7/7)     IGHD7-27*01  1    ---------------------------------------------------.......--------------------------------  7
J  97.8% (44/45)    IGHJ5*02     7    -------------------------------------------------------------.............................  35

                                                      
                                       V  T  V  S  T  
                    Query_2577   362  GTCACCGTCTCCACAG  377
J  97.8% (44/45)    IGHJ5*02     36   ............T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_11509

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD3-16*02                                                                                           37.2    1e-06 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGTC	CGTTTGGGGGAATTATCGTTAT	TTGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCGTTTGGGGGAATTATCGTTATTTGGGCTAC	ARGSVWGNYRYLGY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  T  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_2578   1    GCAGCTGGTGCAGTCTGGAACAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGATCTGGATACAGCTTTACCAGCTA  90
V  96.5% (279/289)  IGHV5-51*01  6    ...................G..............................................T.......................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_2578   91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  96.5% (279/289)  IGHV5-51*01  96   C...................................................A........................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  T  T  T  A  Y  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_2578   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCACCACTACCGCCTACCTGCAGTGGAACAGCCTGAAGGCCTCGGACACCGC  270
V  96.5% (279/289)  IGHV5-51*01  186  .........................................T..GC...................G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  G  S  V  W  G  N  Y  R  Y  L  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2578   271  CATATATTACTGTGCGAGAGGGTCCGTTTGGGGGAATTATCGTTATTTGGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  96.5% (279/289)  IGHV5-51*01  276  ...G...............----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  95.5% (21/22)    IGHD3-16*02  13   ------------------------...........G..........-------------------------------------------  34
J  100.0% (38/38)   IGHJ4*02     11   ---------------------------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_11508

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*11                                                                                           366     2e-103
IGHD3-10*01                                                                                           12.2    35    
IGHJ3*01                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*11	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCCCGCGAGACACTCAC	TTCGGG	CGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCCGCGAGACACTCACTTCGGGCGGGCTTTTGATGTC	ATPRDTHFGRAFDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	286	260	26	0	90.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  T  S  G  S  S  V  K  V  S  C  K  T  S  G  G  P  F  S  S  Y 
                    Query_2579   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGACGTCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACTTCTGGAGGCCCCTTCAGTAGCTAT  91
V  90.9% (260/286)  IGHV1-69*11  7    .................G.............A.C.............................G...........A.......C......  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  L  S  R  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  F  I  P  T  L  G  T  T  D  Y  A  Q 
                    Query_2579   92   GCTCTCAGCCGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGCTGGGATGGTTCATCCCTACCCTTGGGACAACAGACTACGCACAG  181
V  90.9% (260/286)  IGHV1-69*11  97   ...A.....T.........................G.........A.....A..A.........T......T...G..A...........  186
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  T  A  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       T  F  Q  G  R  V  T  F  T  A  D  E  S  T  G  T  V  Y  M  E  V  S  G  L  T  S  E  D  T  A 
                    Query_2579   182  ACGTTCCAGGGCAGAGTCACTTTTACCGCGGACGAATCCACGGGCACAGTCTACATGGAGGTGAGCGGCCTGACATCTGAAGACACGGCC  271
V  90.9% (260/286)  IGHV1-69*11  187  .A..................GA....................A......C..........C.....A......G......G.........  276
                                       K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  T  P  R  D  T  H  F  G  R  A  F  D  V  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2579   272  GTCTATTACTGTGCGACCCCGCGAGACACTCACTTCGGGCGGGCTTTTGATGTCTGGGGCCAGGGGACACTGGTCACCGTCTCTTCAG  359
V  90.9% (260/286)  IGHV1-69*11  277  ..G.............------------------------------------------------------------------------  292
                                       V  Y  Y  C  A                                                                          
D  100.0% (6/6)     IGHD3-10*01  13   ---------------------------------......-------------------------------------------------  18
J  95.7% (44/46)    IGHJ3*01     5    ------------------------------------------....................A......A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_271379

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           315     5e-88
IGHD1-20*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGAATACAA	GTATAAC	GGAATAGGG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGAATACAAGTATAACGGAATAGGGATGGACGTC	TRSEYKYNGIGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  E  S  R  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2580   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCGGGGTTCACCGAAAGTAGGAATTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  91.0% (223/245)  IGHV3-53*01  47   ............................T..........TC.....C..C.......G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  M  
                    Query_2580   91   AGTGGGTCTCAGTTATTTATAGTGGTGGTACCACACACTACGCAGATTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCATGA  180
V  91.0% (223/245)  IGHV3-53*01  137  ......................C.......G....T..........C..C...........A.........................A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      T  T  L  F  L  Q  M  N  S  L  R  A  E  D  S  A  V  Y  Y  C  T  R  S  E  Y  K  Y  N  G  I  
                    Query_2580   181  CCACATTGTTTCTTCAAATGAACAGTTTGAGAGCCGAGGACTCGGCCGTGTATTACTGTACGAGATCAGAATACAAGTATAACGGAATAG  270
V  91.0% (223/245)  IGHV3-53*01  227  A...GC...A...............CC..............A.................G.....-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD1-20*01  2    ----------------------------------------------------------------------------.......-------  8

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2580   271  GGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (42/42)   IGHJ6*02     21   --..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_271378

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           277     9e-77
IGHD2-15*01                                                                                           12.2    34   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTC	ATTGTA	T	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTCATTGTATTACGGTATGGACGTC	ARGVADDGWRGGRRVSLYYGMDV	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	211	34	0	86.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  H  C  W  T  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_2581   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTTAGTGGTCACTGCTGGACCTGGATTCGCCAGACACCAGGGAAGGGACTGGAA  90
V  86.1% (211/245)  IGHV4-34*01  49   ......................................C......T...A.....G......C......C.C...........G.....G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  M  N  H  K  G  R  T  T  Y  N  P  S  L  M  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2581   91   TGGATTGGTGAGATGAATCACAAAGGCAGGACGACCTACAACCCGTCGCTAATGAGTCGAGTCACCATCTCAGTGGACACGTCCAAGAAT  180
V  86.1% (211/245)  IGHV4-34*01  139  ........G..A..C.....T.GT..A..C..C.A............C..C.A...............A.....A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  L  S  L  R  L  T  S  L  I  A  A  D  T  A  M  Y  Y  C  A  R  G  V  A  D  D  G  W  R  G 
                    Query_2581   181  CAGCTCTCCCTGAGATTGACCTCTTTAATCGCCGCGGACACGGCTATGTATTACTGTGCGAGAGGCGTGGCGGATGACGGGTGGCGGGGG  270
V  86.1% (211/245)  IGHV4-34*01  229  ...T.........AGC...G....G.G.C................G...................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      3-IMGT----------------------------->                                 
                                       G  R  R  V  S  L  Y  Y  G  M  D  V  W  G  Q  G  V  T  V  T  V  S  S 
                    Query_2581   271  GGCAGACGCGTGTCATTGTATTACGGTATGGACGTCTGGGGCCAGGGAGTCACGGTCACCGTCTCCTCA  339
D  100.0% (6/6)     IGHD2-15*01  6    --------------......-------------------------------------------------  11
J  91.7% (44/48)    IGHJ6*02     15   ---------------------.......................A..GAC...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_271377

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           350     8e-99
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAA	TACGGTTTTTGGAGTGGTTA	ACCA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCAATACGGTTTTTGGAGTGGTTAACCATGACTAC	ASNTVFGVVNHDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	233	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  Y  S  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2582   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTACAGTGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  96.3% (233/242)  IGHV4-34*01  49   .....................................T.....G..............................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  Y  G  R  T  N  F  N  P  S  L  E  S  R  V  T  I  L  V  D  T  T  K  N 
                    Query_2582   91   TGGATTGGGGAAATCAATCATTATGGAAGAACCAACTTCAACCCGTCCCTCGAGAGTCGAGTCACCATATTAGTAGACACGACCAAGAAC  180
V  96.3% (233/242)  IGHV4-34*01  139  .....................AG......C.......A.............A..................C..........T........  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  N  T  V  F  G  V  V  N  H 
                    Query_2582   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGCAATACGGTTTTTGGAGTGGTTAACCAT  270
V  96.3% (233/242)  IGHV4-34*01  229  ..............................................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.0% (19/20)    IGHD3-3*01   5    -----------------------------------------------------------------....A...............-----  24
J  100.0% (41/41)   IGHJ4*02     8    -----------------------------------------------------------------------------------------.  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2582   271  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (41/41)   IGHJ4*02     9    ........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_271376

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           346     2e-97
IGHD2-21*02                                                                                           18.0    0.61 
IGHJ1*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTCACAGTATTGTGGCGC	TGGCGACTGCTA	CGCCTCC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCACAGTATTGTGGCGCTGGCGACTGCTACGCCTCCGCTGAGTACTTCCAGCAC	ARHSQYCGAGDCYASAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2583   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*08  49   .............................................T..........C.................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  C  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_2583   91   TGGATTGGGTGTATCTATTCCAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGTTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*08  139  ..........A........A...............C...................................AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       H  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  S  Q  Y  C  G  A  G  D 
                    Query_2583   181  CACTTCTCCCTGACCCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATTCACAGTATTGTGGCGCTGGCGAC  270
V  95.1% (233/245)  IGHV4-59*08  229  ..G..........AG....G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD2-21*02  13   -----------------------------------------------------------------------------------...T...  19

                                      MGT-------------------------->                                  
                                       C  Y  A  S  A  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2583   271  TGCTACGCCTCCGCTGAGTACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  334
D  91.7% (11/12)    IGHD2-21*02  20   .....-----------------------------------------------------------  24
J  96.2% (50/52)    IGHJ1*01     1    ------------.....A.........................................C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_271375

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            277     8e-77
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GAATGAACCCTGAATT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATGAACCCTGAATTC	ARGMNPEF	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	41	10	0	80.4
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	213	36	0	85.5


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  I  F  R  G  H  W  M  T  W  I  R  H  L  P  D  K  G  L  
                    Query_2584  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTCGTGGCCACTGGATGACCTGGATTCGCCACCTTCCAGATAAGGGGCTGC  90
V  85.5% (213/249)  IGHV3-7*01  47   ....................................C....A..A..T.T.......G....G.C.....GGC.....GG.........G  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     Q  W  V  A  N  I  N  E  D  G  S  E  E  H  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2584  91   AGTGGGTGGCCAATATAAACGAAGATGGAAGTGAAGAGCACTATGGTGACTCTGTGAAGGGCCGATTCACCATCTCCCGAGACAACGCCC  180
V  85.5% (213/249)  IGHV3-7*01  137  .............C.....GC.............GA.AT......TG..............................A...........A  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                     Q  N  S  L  V  L  Q  M  N  N  L  R  V  E  D  T  S  V  Y  Y  C  A  R  G  M  N  P  E  F  W  
                    Query_2584  181  AGAACTCTCTCGTTTTGCAAATGAACAACCTGAGAGTCGAAGACACTTCTGTATATTACTGTGCGAGAGGAATGAACCCTGAATTCTGGG  270
V  85.5% (213/249)  IGHV3-7*01  227  .......A..GTA.C............G........C...G.....GG....G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  94.3% (33/35)    IGHJ4*02    14   -------------------------------------------------------------------------------------.....  18

                                                                   
                                     G  Q  G  T  L  V  I  V  S  S  
                    Query_2584  271  GCCAGGGAACCCTGGTCATCGTCTCGTCAG  300
J  94.3% (33/35)    IGHJ4*02    19   ..................C......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_271374

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           355     3e-100
IGHD3-3*01                                                                                            43.0    2e-08 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGGCGAGGCC	GTATTACGACTTTTGGAGTGGTTGTTAT	CGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGCGAGGCCGTATTACGACTTTTGGAGTGGTTGTTATCGGCTGGTTCGACCCC	ARGGRGRITTFGVVVIGWFDP	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_2585   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTATTATTGGAGCTGGATCCGCCAGTCTCCAGGGAAGGGGCTGGAA  90
V  96.3% (236/245)  IGHV4-34*01  49   ...............................................C..C..................C.C.................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  K  K 
                    Query_2585   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAAGAAA  180
V  96.3% (236/245)  IGHV4-34*01  139  ............................................................G............................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  R  G  R  I  T  T  F 
                    Query_2585   181  CAGTTCTCCCTGAAGCTGAGGTCTGCGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGGGGCGAGGCCGTATTACGACTTTT  270
V  96.3% (236/245)  IGHV4-34*01  229  ....................C....T.......................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  92.9% (26/28)    IGHD3-3*01   1    ----------------------------------------------------------------------------.........T....  14

                                      MGT-------------------------->                                  
                                       G  V  V  V  I  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2585   271  GGAGTGGTTGTTATCGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  334
D  92.9% (26/28)    IGHD3-3*01   15   .........A....--------------------------------------------------  28
J  97.9% (46/47)    IGHJ5*02     5    -----------------..........................................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_271373

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           296     2e-82
IGHD4-17*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACGATGC	CTACGGT	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATGACGATGCCTACGGTCTTGACTGC	VRDDDAYGLDC	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	19	5	0	79.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	233	211	22	0	90.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  S  T  F  S  R  H  W  M  H  W  V  R  Q  A  P  G  K  G  P  V  C  V  A  R  I 
                    Query_2586   13   TGTGCAGCCTCTGGATCCACCTTCAGTAGACACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCCGGTGTGCGTCGCACGTATC  102
V  90.6% (211/233)  IGHV3-74*01  64   ................T............CT.......................................T......G...T.......T  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       K  S  D  G  S  Y  R  D  Y  A  D  F  M  K  G  R  F  T  I  S  R  D  N  A  K  N  I  L  Y  L 
                    Query_2586   103  AAGAGTGATGGGAGTTACAGAGACTACGCGGACTTCATGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACATTCTGTATTTG  192
V  90.6% (211/233)  IGHV3-74*01  154  ..T............AG..C.AG...........C.G..........................................CG......C..  243
                                       N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------CDR3-IMGT----------->            
                                       Q  M  N  S  L  S  A  D  D  T  A  V  Y  Y  C  V  R  D  D  D  A  Y  G  L  D  C  W  G  Q  G 
                    Query_2586   193  CAAATGAACAGTCTGAGTGCCGACGACACGGCTGTCTATTACTGTGTAAGAGATGACGATGCCTACGGTCTTGACTGCTGGGGCCAGGGG  282
V  90.6% (211/233)  IGHV3-74*01  244  .................A.....G...........G..........C......-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (7/7)     IGHD4-17*01  4    --------------------------------------------------------------.......---------------------  10
J  95.2% (40/42)    IGHJ4*02     7    ----------------------------------------------------------------------......A............A  26

                                                            
                                       T  L  V  T  V  S  S  
                    Query_2586   283  ACCCTGGTCACCGTCTCCTCAG  304
J  95.2% (40/42)    IGHJ4*02     27   ......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_103606

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           322     2e-90
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ3*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGGCCCCCC	TACTATGATCGTAGTGGTTAT	CACGAC	GATCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGACCGGCCCCCCTACTATGATCGTAGTGGTTATCACGACGATCCTTTTGATGTG	ARDRPPYYDRSGYHDDPFDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  R  D  Y  W  M  H  W  V  R  Q  V  T  G  K  G  L  
                    Query_2587   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACTTTCAGAGACTACTGGATGCACTGGGTCCGTCAAGTTACAGGGAAGGGACTGG  90
V  91.2% (228/250)  IGHV3-74*01  47   .....................C...............C.....TAG.....................C....C.C..........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  G  D  G  T  G  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2587   91   TGTGGGTCTCACGTATCAATGGCGATGGCACTGGCACAAATTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.2% (228/250)  IGHV3-74*01  137  ................T...A.T.....G.G.A......GC.................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      T  N  T  L  Y  L  Q  M  T  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  R  P  P  Y  Y  D  
                    Query_2587   181  CGAATACACTGTATCTGCAAATGACCAGTCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCAAGAGACCGGCCCCCCTACTATGATC  270
V  91.2% (228/250)  IGHV3-74*01  227  A...C..G................A...........C.................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.2% (20/21)    IGHD3-22*01  5    --------------------------------------------------------------------------------.........A  14

                                      R3-IMGT------------------------>                                  
                                      R  S  G  Y  H  D  D  P  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2587   271  GTAGTGGTTATCACGACGATCCTTTTGATGTGTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
D  95.2% (20/21)    IGHD3-22*01  15   ...........-------------------------------------------------------  25
J  95.9% (47/49)    IGHJ3*01     2    -----------------...G..........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_11503

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            330     1e-92
IGHD3-16*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCAGCCTGATCGGGACAG	TGCTTAT	N/A	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCAGCCTGATCGGGACAGTGCTTATTAC	ASQPDRDSAYY	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  I  S  G  V  S  F  S  R  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_2588   1    ACCCTGTCCCTCACCTGCGCTATATCTGGTGTCTCCTTCAGTAGAAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  93.1% (228/245)  IGHV4-4*02   49   .....................G.C.......G....A....C..T.G.......................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  D  S  G  S  T  N  Y  N  E  S  L  K  S  R  V  T  I  S  I  D  K  S  K 
                    Query_2588   91   GAGTGGATTGGGGAAATCTCTGATAGTGGGAGCACCAACTACAACGAGTCTCTCAAGAGTCGAGTCACCATATCAATAGACAAGTCCAAG  180
V  93.1% (228/245)  IGHV4-4*02   139  ...................A.C.......................CC...C........................G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  H  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  Q  P  D  R  D  S  A  Y 
                    Query_2588   181  AACCAATTCTCCCTGCATCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGCCAGCCTGATCGGGACAGTGCTTAT  270
V  93.1% (228/245)  IGHV4-4*02   229  .....G.........A.G...............................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-16*01  28   -----------------------------------------------------------------------------------.......  34

                                      -->                                  
                                       Y  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_2588   271  TACTGGGGCCAGGGAACCCTGGCCACCGTCTCCTCAG  307
J  97.3% (36/37)    IGHJ4*02     12   ......................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_271370

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           363     2e-102
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATTTGGTCGCCACCTTCAAC	TACTATGATA	ATTACTCGGGAAGTAAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATTTGGTCGCCACCTTCAACTACTATGATAATTACTCGGGAAGTAATTGGTTCGACCGC	ARNLVATFNYYDNYSGSNWFDR	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2589   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (240/248)  IGHV3-48*03  47   ............................................A.............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  S  S  G  A  T  R  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2589   91   AGTGGCTTTCATACATCAGTAGTAGTGGTGCTACCAGATTCTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (240/248)  IGHV3-48*03  137  .....G..........T............AG.....T..A..................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  N  L  V  A  T  F  N  
                    Query_2589   181  AGAACTCACTGTATCTGCAAATCAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAAATTTGGTCGCCACCTTCAACT  270
V  96.8% (240/248)  IGHV3-48*03  227  ......................G.............................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  5    -----------------------------------------------------------------------------------------.  5

                                      -CDR3-IMGT--------------------------->                                  
                                      Y  Y  D  N  Y  S  G  S  N  W  F  D  R  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_2589   271  ACTATGATAATTACTCGGGAAGTAATTGGTTCGACCGCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  342
D  100.0% (10/10)   IGHD3-22*01  6    .........---------------------------------------------------------------  14
J  95.7% (44/46)    IGHJ5*02     6    --------------------------..........C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_305698

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            310     1e-86
IGHD2-21*01                                                                                           12.2    31   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	TGGTGA	AGTATTCCTTGGATC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGGTGAAGTATTCCTTGGATCACTTTGACCAC	ARLVKYSLDHFDH	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  N  D  H  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_2590   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATTACCAATGATCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.2% (222/246)  IGHV4-4*02   49   ..................GC...........G......C.G..G.AG.A.........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  R  S  G  S  T  T  Y  N  P  S  L  Q  S  R  V  A  F  S  V  D  K  S  K 
                    Query_2590   91   GAGTGGATTGGAGAAATCTATCGTAGTGGGAGCACCACTTACAACCCGTCCCTTCAGAGTCGAGTCGCCTTCTCAGTAGACAAGTCCAAG  180
V  90.2% (222/246)  IGHV4-4*02   139  ...........G..........A..............AC..............CA...........A..A.A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  F  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  V  K  Y  S  L  D  H 
                    Query_2590   181  AACCAGTTCTCCCTGAGTCTGAGATCTGTGACCGCCGCCGATACGGCCGTATATTACTGTGCGAGATTGGTGAAGTATTCCTTGGATCAC  270
V  90.2% (222/246)  IGHV4-4*02   229  ................AG.....C..............G..C........G...............------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-21*01  13   -------------------------------------------------------------------......-----------------  18
J  95.6% (43/45)    IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                                  
                                       F  D  H  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_2590   271  TTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  313
J  95.6% (43/45)    IGHJ4*02     6    ......T................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_305694

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           14.1    8.6  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCCAGT	TGACAGTCGTGGGCATTAC	CAGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCCAGTTGACAGTCGTGGGCATTACCAGTTCTACTTTGACTCC	AKDPVDSRGHYQFYFDS	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  P  M  S  W  V  R  L  A  P  G  R  G  L  
                    Query_2591   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTTAGTACCTATCCCATGAGCTGGGTCCGCCTGGCTCCAGGGAGGGGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   .....................................C.....C.G....G..................A...........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  S  G  D  R  T  Y  Y  A  G  S  V  M  G  R  F  T  I  S  R  D  N  S  
                    Query_2591   91   AGTGGGTCTCAGTTATTAGTGGTAGTGGTGATAGGACATACTACGCAGGCTCCGTGATGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  92.8% (232/250)  IGHV3-23*01  137  ............C.................G...C.............A........A...........................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  V  Y  L  Q  M  H  S  P  T  V  E  D  T  A  V  Y  Y  C  A  K  D  P  V  D  S  R  G  
                    Query_2591   181  AGAACACGGTATATCTGCAAATGCACAGCCCGACAGTCGAGGACACGGCCGTATATTACTGTGCGAAAGACCCAGTTGACAGTCGTGGGC  270
V  92.8% (232/250)  IGHV3-23*01  227  ........C.G............A......T..G..C.................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  78.9% (15/19)    IGHD3-22*01  10   ----------------------------------------------------------------------------...T...A....TT  23

                                      GT-------------------->                                  
                                      H  Y  Q  F  Y  F  D  S  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2591   271  ATTACCAGTTCTACTTTGACTCCTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  327
D  78.9% (15/19)    IGHD3-22*01  24   .....----------------------------------------------------  28
J  95.7% (45/47)    IGHJ4*02     2    ----------...........A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_305696

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            251     9e-69
IGHD1-20*01                                                                                           18.0    0.64 
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD1-20*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	GAGACCGGATGTGGTGC	TAACTGGCACGA	AACGAGGTTACACGAAACGAGGTG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGTGAGAGACCGGATGTGGTGCTAACTGGCACGAAACGAGGTTACACGAAACGAGGTGACTGGTTCGACCCC	ACERPDVVLTGTKRGYTKRGDWFDP	243	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	15	9	0	62.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	12	12	0	50
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	205	45	0	82


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  L  P  F  A  D  H  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2592   1    GGTCCCTGAGACTCTCCTGTGTAGGCTCCGGACTCCCCTTTGCTGACCATTACATGAGCTGGGTCCGCCAGGCTCCGGGGAAGGGACTGG  90
V  82.0% (205/250)  IGHV3-7*03   47   .....................C..C...T...T..A.....AG.AG.T...GG.......................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  Q  I  P  P  G  G  P  D  A  Y  Y  A  E  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_2592   91   AGTGGGTGGCCCAAATTCCGCCCGGTGGACCTGATGCGTACTATGCGGAATCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  82.0% (205/250)  IGHV3-7*03   137  ...........A.C..AAA..AA.A....AG...GAAA.......T...C.......A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  K  S  V  H  L  Q  M  D  S  L  R  A  D  D  T  A  L  Y  R  C  A  C  E  R  P  D  V  V  L  
                    Query_2592   181  AGAAGTCAGTTCATCTGCAAATGGACAGCCTGAGAGCCGACGACACAGCCCTCTACCGCTGTGCGTGTGAGAGACCGGATGTGGTGCTAA  270
V  82.0% (205/250)  IGHV3-7*03   227  ....C...C.GT...........A................G.....G...G.G..TTA.......A.A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD1-20*01  5    ---------------------------------------------------------------------------------------...  7

                                      -----CDR3-IMGT-------------------------------->                                  
                                      T  G  T  K  R  G  Y  T  K  R  G  D  W  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_2592   271  CTGGCACGAAACGAGGTTACACGAAACGAGGTGACTGGTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  351
D  91.7% (11/12)    IGHD1-20*01  8    ....A....------------------------------------------------------------------------  16
J  97.9% (47/48)    IGHJ5*02     4    ---------------------------------..............................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_305697

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           336     1e-94
IGHD3-22*01                                                                                           39.1    3e-07
IGHJ2*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTGCCCATGA	ATTACTATGATAGTAGTGGCTCTTAC	ATTGGGAGCGTTA	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTGCCCATGAATTACTATGATAGTAGTGGCTCTTACATTGGGAGCGTTAGGTACTTCGATTTC	ARDVPMNYYDSSGSYIGSVRYFDF	238	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	230	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  N  S  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_2593   1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAATAGTTTTTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  93.9% (230/245)  IGHV4-59*01  49   ...........................G............G.....AC........C............C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  A  K  N 
                    Query_2593   91   TGGATTGGCTATGTCTATTCCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGCCGAGTCACCTTATCAGTGGACACGGCCAAGAAC  180
V  93.9% (230/245)  IGHV4-59*01  139  ........G...A......A....................................T.........A.......A......T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------------C
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  V  P  M  N  Y  Y  D  S 
                    Query_2593   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATGTGCCCATGAATTACTATGATAGT  270
V  93.9% (230/245)  IGHV4-59*01  229  .............A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.3% (24/26)    IGHD3-22*01  3    ----------------------------------------------------------------------------..............  16

                                      DR3-IMGT------------------------------>                                  
                                       S  G  S  Y  I  G  S  V  R  Y  F  D  F  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2593   271  AGTGGCTCTTACATTGGGAGCGTTAGGTACTTCGATTTCTGGGGCCGTGGCACCCTGGTCACTGTCTCTTCAG  343
D  92.3% (24/26)    IGHD3-22*01  17   .....T.A....-------------------------------------------------------------  28
J  95.8% (46/48)    IGHJ2*01     6    -------------------------...........C...............................C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_305692

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           433     1e-123
IGHD3-22*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCCGT	TGGTTAT	AATTCCC	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGTTGGTTATAATTCCCACTCCTACTACGGTATGAACATC	ARAVGYNSHSYYGMNI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_2594   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  97.9% (283/289)  IGHV5-51*01  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_2594   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGACC  180
V  97.9% (283/289)  IGHV5-51*01  96   .......................................................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  A  I  S  T  A  Y  L  Q  W  S  S  L  S  A  S  D  P  A
                    Query_2594   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGGCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAGTGCCTCGGACCCCGC  270
V  97.9% (283/289)  IGHV5-51*01  186  .....................................T....................................AG.........A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        L  Y  Y  C  A  R  A  V  G  Y  N  S  H  S  Y  Y  G  M  N  I  W  G  Q  G  T  P  V  T  V  S
                    Query_2594   271  CCTGTATTACTGTGCGAGAGCCGTTGGTTATAATTCCCACTCCTACTACGGTATGAACATCTGGGGCCAAGGAACCCCGGTCACCGTCTC  360
V  97.9% (283/289)  IGHV5-51*01  276  .A.................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-22*01  19   ------------------------.......-----------------------------------------------------------  25
J  91.1% (51/56)    IGHJ6*02     7    --------------------------------------...A.............G..G.............G...A.............  58

                                          
                                        S 
                    Query_2594   361  CTCA  364
J  91.1% (51/56)    IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_85276

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           315     5e-88
IGHD3-22*01                                                                                           21.8    0.044
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACAG	CCGTTTTGGTCCCGG	ACTATGATAGT	GGCGCTTTTTACCCTAGGATA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AATACAGCCGTTTTGGTCCCGGACTATGATAGTGGCGCTTTTTACCCTAGGATATTTGACTAT	NTAVLVPDYDSGAFYPRIFDY	249	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	24	6	0	80
FR3-IMGT	135	248	114	105	9	0	92.1
CDR3-IMGT (germline)	249	255	7	5	2	0	71.4
Total	N/A	N/A	255	228	27	0	89.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  L  S  N  A  F  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2595   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGACTCACTTTAAGTAACGCCTTCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGTCTGG  90
V  89.4% (228/255)  IGHV3-15*01  47   .......T..............A.........T.......C..........GG....GC..........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  V  K  S  N  T  A  G  G  T  I  D  Y  A  A  S  V  E  G  R  F  T  I  S  R  D  
                    Query_2595   91   AGTGGGTTGGTCGTGTTAAAAGCAATACTGCCGGTGGGACGATAGACTACGCGGCATCCGTGGAAGGCAGATTCACGATCTCAAGAGATG  180
V  89.4% (228/255)  IGHV3-15*01  137  ..........C...A..........A....AT........A.C.........T...C.....A.............C.............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  N  M  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  N  T  A  V  L  V  P  
                    Query_2595   181  ATTCAAAGAACATGTTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTCTATTATTGTAATACAGCCGTTTTGGTCCCGG  270
V  89.4% (228/255)  IGHV3-15*01  227  .......A....C.C...........................................G.....C....CC....---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 

                                      -----CDR3-IMGT-------------------------->                                  
                                      D  Y  D  S  G  A  F  Y  P  R  I  F  D  Y  W  G  Q  G  T  R  V  S  V  S  S  
                    Query_2595   271  ACTATGATAGTGGCGCTTTTTACCCTAGGATATTTGACTATTGGGGCCAGGGAACCCGGGTCAGCGTCTCCTCAG  345
D  100.0% (11/11)   IGHD3-22*01  6    ...........----------------------------------------------------------------  16
J  93.0% (40/43)    IGHJ4*02     6    --------------------------------........C................T.....C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_85277

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-10*01                                                                                           10.3    117  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACA	GGGGA	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACAGGGGATACTACGGTATGGACGTC	ARDDRGYYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_2596   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTATTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   .....................................................C.A.....G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  H  Y  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S 
                    Query_2596   91   CTGGAGTGGATTGGGAACATCCATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ...............T.....T...................C.................G........T.....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  E  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  D  D  R  G  Y  Y  G 
                    Query_2596   181  AAGAACCAGTTCTCCCTGGAGCTGACCTCTATGACAGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGATGACAGGGGATACTACGGT  270
V  94.4% (237/251)  IGHV4-31*03  229  ..................A......G....G....T.................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------------.....---------  20
J  96.0% (48/50)    IGHJ6*02     12   ---------------------------------------------------------------------------------.........  20

                                      -------->                                
                                       M  D  V  W  G  Q  G  I  T  V  T  V  S  S
                    Query_2596   271  ATGGACGTCTGGGGCCAAGGGATTACGGTCACCGTCTCCTC  311
J  96.0% (48/50)    IGHJ6*02     21   ......................CC.................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_85274

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           300     9e-84
IGHD1-7*01                                                                                            19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTGCTGGCCTTAA	AACTGGAACT	TCCGCCTACCTCTT	CTACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTGCTGGCCTTAAAACTGGAACTTCCGCCTACCTCTTCTACAGTTTGGACGTC	ARSAGLKTGTSAYLFYSLDV	247	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	246	123	106	8	9	86.2
CDR3-IMGT (germline)	247	252	6	6	0	0	100
Total	N/A	N/A	252	224	19	9	88.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  F  T  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2597   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCTTTACTTCTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  88.9% (224/252)  IGHV4-59*01  49   ...............................G....A.C.G.AG...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><--------------------------------------------------------
                                       W  I  G  Y  I  Y  D  S  E  T  T  N  Y  T  N  Y  N  P  S  L  K  S  R  V  T  F  S  V  D  T 
                    Query_2597   91   TGGATTGGCTATATCTATGACAGTGAGACCACCAACTACACCAACTATAACCCCTCCCTCAAGAGTCGAGTCACCTTTTCAGTAGACACG  180
V  88.9% (224/252)  IGHV4-59*01  139  ........G.........T......G..G..........---------...........................A.A............  219
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y           N  P  S  L  K  S  R  V  T  I  S  V  D  T 

                                      FR3-IMGT---------------------------------------------------------><-----------------------
                                       S  M  N  H  F  S  L  K  L  T  S  V  T  A  A  G  T  A  V  Y  Y  C  A  R  S  A  G  L  K  T 
                    Query_2597   181  TCCATGAATCACTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGGCACGGCCGTGTATTACTGTGCGAGATCTGCTGGCCTTAAAACT  270
V  88.9% (224/252)  IGHV4-59*01  220  ....A...C..G................GC................A.........................------------------  291
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                   
D  100.0% (10/10)   IGHD1-7*01   6    --------------------------------------------------------------------------------------....  9

                                      --CDR3-IMGT------------------------>                                 
                                       G  T  S  A  Y  L  F  Y  S  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2597   271  GGAACTTCCGCCTACCTCTTCTACAGTTTGGACGTCTGGGGCCAAGGGACCACCGTCACCGTCTCCTCA  339
D  100.0% (10/10)   IGHD1-7*01   10   ......---------------------------------------------------------------  15
J  93.9% (46/49)    IGHJ6*02     14   --------------------....G..A.........................G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_85275

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           371     6e-105
IGHD3-3*01                                                                                            14.1    8.3   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	241	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2598   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.4% (241/245)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_2598   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.4% (241/245)  IGHV4-34*01  139  .........................................................................T................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  C  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_2598   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTGTTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  98.4% (241/245)  IGHV4-34*01  229  ...............................................G.A...............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2598   271  GCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_85272

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           372     2e-105
IGHD6-6*01                                                                                            10.3    124   
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TCGTC	GGCCGAACCCTTCTAACA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTCGGCCGAACCCTTCTAACAACTACTACAACGGTTTGGACGTC	ARDRRPNPSNNYYNGLDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_2599   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.6% (244/250)  IGHV3-11*06  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  S  T  S  Y  T  K  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2599   91   AGTGGGTTTCATACATTAGTACTAGTACTAGTTACACAAAGTACTCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (244/250)  IGHV3-11*06  137  .....................G.....G............C...G.............................................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  R  P  N  P  S  
                    Query_2599   181  AGAACTCACTGTTTCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGTCGGCCGAACCCTTCTA  270
V  97.6% (244/250)  IGHV3-11*06  227  ............A............C............................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD6-6*01   13   ----------------------------------------------------------------------.....---------------  17

                                      IMGT--------------------->                                 
                                      N  N  Y  Y  N  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2599   271  ACAACTACTACAACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  96.4% (54/56)    IGHJ6*02     7    ---........T.....A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_85273

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           294     7e-82
IGHD2-15*01                                                                                           10.3    127  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TCTCC	TATTG	CCATGAGCGGGACTCGGTTTTCGAGTCCGGCTCCCCTG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATCTCCTATTGCCATGAGCGGGACTCGGTTTTCGAGTCCGGCTCCCCTGGACTAC	AKSPIAMSGTRFSSPAPLDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  A  L  S  W  V  R  Q  A  S  G  K  G  L  
                    Query_2600   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTGACTATGCCCTGAGTTGGGTCCGACAGGCTTCAGGGAAGGGGCTGC  90
V  87.9% (218/248)  IGHV3-23*01  47   ...........................................CAG.......A....C........C......C..............G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  T  I  S  G  S  G  R  G  T  S  T  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2600   91   AGTGGGTCTCAACTATCAGTGGTAGTGGTCGTGGAACCTCTACTGTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  87.9% (218/248)  IGHV3-23*01  137  ...........G....T............G..A.C..A.ACTAC.C............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  Q  L  S  S  L  R  V  D  D  T  A  I  Y  Y  C  A  K  S  P  I  A  M  S  G  
                    Query_2600   181  AGAACACACTGTATCTCCAGCTGAGCAGCCTGAGAGTCGACGACACGGCCATATACTATTGTGCGAAATCTCCTATTGCCATGAGCGGGA  270
V  87.9% (218/248)  IGHV3-23*01  227  .......G........G..AA...A...........C...G.........G....T..C.........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD2-15*01  5    -------------------------------------------------------------------------.....------------  9

                                      R3-IMGT------------------------>                                  
                                      T  R  F  S  S  P  A  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2600   271  CTCGGTTTTCGAGTCCGGCTCCCCTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
J  100.0% (40/40)   IGHJ4*02     9    --------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_85270

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           333     1e-93
IGHD3-10*01                                                                                           39.1    3e-07
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	G	ACTATGGAACGGGGAGTTATTATAAC	AAGACCC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACTATGGAACGGGGAGTTATTATAACAAGACCCATGGACGTC	AKTMERGVIITRPMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  S  F  S  H  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2601   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCAGCTTCAGTCACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.1% (230/247)  IGHV3-30*18  47   ........................C...........C.......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  A  Y  D  E  S  F  K  S  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2601   91   AGTGGGTGGCAGTTATAGCATATGATGAGAGTTTTAAATCTTACGCAGCCTCCGTGAAGGGCCGATTTACCATCTCCAGAGACAATTCCA  180
V  93.1% (230/247)  IGHV3-30*18  137  .................T.........GA...AA.....AC..T....A..................C......................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  K  T  M  E  R  G  V  I  
                    Query_2601   181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGATGAGGACACGGCTGTGTATTATTGTGCGAAGACTATGGAACGGGGAGTTATTA  270
V  93.1% (230/247)  IGHV3-30*18  227  ...A................................C.....................C........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.3% (24/26)    IGHD3-10*01  6    --------------------------------------------------------------------.......TT.............  27

                                      T------------------>                                 
                                      I  T  R  P  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2601   271  TAACAAGACCCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  323
D  92.3% (24/26)    IGHD3-10*01  28   ....-------------------------------------------------  31
J  97.6% (41/42)    IGHJ6*02     21   -----------......................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_75227

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           346     2e-97
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATGG	GGTTCGAGGA	CACTCGACCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTTCGAGGACACTCGACCGTTTTTGATATC	ARDGVRGHSTVFDI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  N  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2602   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTAACTCTTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (232/243)  IGHV4-59*08  49   ........................................G....T...AC.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_2602   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTATAATCCCTCCCTTAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  95.5% (232/243)  IGHV4-59*08  139  ......................................C..C........C.....................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  V  R  G  H  S  T  V 
                    Query_2602   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGATGGGGTTCGAGGACACTCGACCGTT  270
V  95.5% (232/243)  IGHV4-59*08  229  ....................C........C.......................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD3-10*01  11   --------------------------------------------------------------------......G...------------  20
J  93.2% (41/44)    IGHJ3*02     7    -----------------------------------------------------------------------------------------.  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  T  I  I  V  S  S  
                    Query_2602   271  TTTGATATCTGGGGCCAAGGGACAACGATCATCGTCTCTTCAG  313
J  93.2% (41/44)    IGHJ3*02     8    .........................T.G...C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_341353

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           380     1e-107
IGHD3-22*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CAC	AGTAGTAGTTATT	CTTCCGTAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACACAGTAGTAGTTATTCTTCCGTAAACTTTTCCTAC	AGHSSSYSSVNFSY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  A  T  G  D  T  L  S  N  H
                    Query_2603   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAAGTCTCCTGTAGGGCTACCGGAGACACCCTCAGCAACCA  90
V  92.0% (266/289)  IGHV1-69*01  6    ..................G................................G........C.A....T.T....G....T......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  V  L  H  I  T  N  Y  A  Q
                    Query_2603   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGAATCATCCCTGTCCTTCATATAACAAACTATGCACA  180
V  92.0% (266/289)  IGHV1-69*01  96   ......................................................G.........A..T..GG..C.G.......C.....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  S  V  T  I  T  A  D  D  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  N  T  A
                    Query_2603   181  GAAGTTCCAGGGCAGCGTCACAATTACCGCGGACGATTCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGAACACGGC  270
V  92.0% (266/289)  IGHV1-69*01  186  ...............A.....G..............A.............................................G.......  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                 
                                        V  Y  Y  C  A  G  H  S  S  S  Y  S  S  V  N  F  S  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_2603   271  CGTGTATTACTGTGCGGGACACAGTAGTAGTTATTCTTCCGTAAACTTTTCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  358
V  92.0% (266/289)  IGHV1-69*01  276  ................A..---------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                      
D  92.3% (12/13)    IGHD3-22*01  14   ----------------------......G......-----------------------------------------------------  26
J  95.5% (42/44)    IGHJ4*02     4    --------------------------------------------.....GA.....................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_85278

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTGA	TATGGTTCGCGGAGTT	CTTGAGAGGGAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTGATATGGTTCGCGGAGTTCTTGAGAGGGAGGACTAC	ARLDMVRGVLEREDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_2604   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGCAAGGGTTCTGGGTACAGCTTTTCCACCTA  90
V  97.6% (282/289)  IGHV5-51*03  6    ............................................................T...........A.........A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  S  P
                    Query_2604   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACAGCCC  180
V  97.6% (282/289)  IGHV5-51*03  96   ........G........................................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2604   181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  ........A.................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  L  D  M  V  R  G  V  L  E  R  E  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2604   271  CATGTATTACTGTGCGAGACTTGATATGGTTCGCGGAGTTCTTGAGAGGGAGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  97.6% (282/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  93.8% (15/16)    IGHD3-10*01  8    ------------------------.........G......--------------------------------------------------  23
J  100.0% (40/40)   IGHJ4*02     9    ----------------------------------------------------......................................  46

                                        
                                        
                    Query_2604   361  AG  362
J  100.0% (40/40)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_85279

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           371     7e-105
IGHD3-10*01                                                                                           14.1    9.5   
IGHJ2*01                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGCC	ACTATGG	GGATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATC	ARSHYGDAYWYLDI	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	97	17	0	85.1
CDR3-IMGT (germline)	291	295	5	5	0	0	100
Total	N/A	N/A	293	265	28	0	90.4


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T 
                    Query_2605   3    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATCTTCACC  92
V  90.4% (265/293)  IGHV1-18*01  1    ...G.T.................................................................T..........C...T...  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  F  E  W  M  G  W  I  S  P  Y  N  G  N  T  A  Y 
                    Query_2605   93   AGTTATGGAATCACTTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAGCCTAC  182
V  90.4% (265/293)  IGHV1-18*01  91   ..C.....T....GC...........................C.......................G.................AA...T  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  E  K  F  Q  G  R  F  T  V  A  T  E  T  S  T  N  T  A  F  M  E  L  R  S  L  K  A  D  D 
                    Query_2605   183  GCAGAGAAGTTCCAGGGCAGATTCACCGTGGCCACAGAGACTTCCACGAACACAGCCTTCATGGAGCTGCGGAGTCTGAAAGCTGACGAC  272
V  90.4% (265/293)  IGHV1-18*01  181  ...C.....C...........G.....A..A.......C..A.......G........A..........A....C....G.T........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  S  H  Y  G  D  A  Y  W  Y  L  D  I  W  G  R  G  T  L  V  T  V  S 
                    Query_2605   273  ACGGCCGTCTATTACTGTGCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATCTGGGGCCGTGGCACCCTGGTCACTGTCTCC  362
V  90.4% (265/293)  IGHV1-18*01  271  ........G..............-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (7/7)     IGHD3-10*01  6    ----------------------------.......-------------------------------------------------------  12
J  96.2% (51/53)    IGHJ2*01     1    -----------------------------------------..........T.....C................................  49

                                          
                                       S  
                    Query_2605   363  TCAG  366
J  96.2% (51/53)    IGHJ2*01     50   ....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_48471

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     2e-90
IGHD6-19*01                                                                                           19.9    0.16 
IGHJ1*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	TTCCTCGGCGA	GTATTGCACTGGCTGG	AACATTTGGGGT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTCCTCGGCGAGTATTGCACTGGCTGGAACATTTGGGGTC	ARGSSASIALAGTFGV	261	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	43	7	0	86
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	47	4	0	92.2
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	99	15	0	86.8
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	237	31	0	88.4


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  S  C  G  V  R  G  G  S  F  S  G  S  Y  W  A  W  I  R  
                    Query_2606   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCTCTTGCGGTGTCCGTGGTGGGTCCTTCAGTGGCTCTTACTGGGCCTGGATCCGCC  90
V  88.4% (237/268)  IGHV4-34*01  26   ........T.......T..................A.C....C....TA..................T.AC......AG...........  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  P  Q  Y  N  P  S  L  K  S  R  V  S  
                    Query_2606   91   AGCCCCCAGGCAAGGGGCTGGAGTGGATTGGCGAAATCAATCATAGTGGAAGTCCCCAATACAACCCGTCCCTCAAGAGTCGAGTCAGTA  180
V  88.4% (237/268)  IGHV4-34*01  116  ..........G....................G....................CA..A.C............................CC.  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  A  V  D  T  S  N  N  H  L  S  L  R  M  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_2606   181  TCGCAGTGGACACGTCGAACAACCACCTCTCCCTGAGGATGACCTCTGTTACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGTT  270
V  88.4% (237/268)  IGHV4-34*01  206  .AT....A........C..G.....GT.........A.C...G......G......................................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  

                                      ----------CDR3-IMGT------------------>                                  
                                      S  S  A  S  I  A  L  A  G  T  F  G  V  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_2606   271  CCTCGGCGAGTATTGCACTGGCTGGAACATTTGGGGTCTGGGGCCAGGGCACCCTAGTCACCGTCTCCGCAG  342
D  87.5% (14/16)    IGHD6-19*01  3    ---------....A...G.......-----------------------------------------------  18
J  94.3% (33/35)    IGHJ1*01     18   -------------------------------------..................G............T...  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_84887

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           324     8e-91
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CTGACGAC	GTAGTGGTTATTAC	CACTCTCCCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCTGACGACGTAGTGGTTATTACCACTCTCCCGTTTGACTAC	AKADDVVVITTLPFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  Y  A  M  S  W  V  R  Q  A  P  G  G  G  L  
                    Query_2607   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCCACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGGGGGGCCTGG  90
V  91.6% (228/249)  IGHV3-23*01  47   ............................................AG..................................AA...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  T  G  S  G  T  N  T  Y  Y  R  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2607   91   AGTGGGTCTCAGGTATTACTGGTAGTGGTACTAACACATACTACAGAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  91.6% (228/249)  IGHV3-23*01  137  ............C.....G..........GG..G..........GC........................................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  I  L  E  M  N  G  L  R  A  E  D  T  A  I  Y  Y  C  A  K  A  D  D  V  V  V  I  
                    Query_2607   181  AGAACACACTTATTCTGGAAATGAACGGCCTGAGAGCCGAGGACACGGCCATATATTATTGTGCGAAAGCTGACGACGTAGTGGTTATTA  270
V  91.6% (228/249)  IGHV3-23*01  227  .......G..GTA....C........A.......................G.......C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (14/14)   IGHD3-22*01  15   -----------------------------------------------------------------------------.............  27

                                      T------------------>                                  
                                      T  T  L  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2607   271  CCACTCTCCCGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (14/14)   IGHD3-22*01  28   .-----------------------------------------------------  28
J  100.0% (43/43)   IGHJ4*02     6    -----------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_48470

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_2608   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  96.2% (278/289)  IGHV5-51*03  6    ...............................A..............................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  G  P
                    Query_2608   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACGGCCC  180
V  96.2% (278/289)  IGHV5-51*03  96   ...................................................G............................G....A....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_2608   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAATACCGCCTACCTGCAGTGGAGTAGCCTGCAGGCCTCGGACACCGC  270
V  96.2% (278/289)  IGHV5-51*03  186  ............................................GC....................C......A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2608   271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGTCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.2% (278/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    ------------------------------------------............C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_141069

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           405     4e-115
IGHD3-3*01                                                                                            16.1    2.6   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-3*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGGAGTCGTCAGAGA	TGGTTATAATA	TTCCCTTTCG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGGAGTCGTCAGAGATGGTTATAATATTCCCTTTCGCTAC	REWESSEMVIIFPFAT	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	75	71	3	1	94.7
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	19	5	0	79.2
FR3-IMGT	176	289	114	110	4	0	96.5
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	279	15	1	94.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q   W  C  S  L  E  L  R  *  R  G  L  G  P  Q  *  R  F  P  A  R  H  L  D  T  P  S  P
                    Query_2609   3    CAGATGCAG-TGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACC  91
V  94.6% (279/295)  IGHV1-46*01  1    ...G.....C.............G.............A....................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                        T  T  I  Y  T  G  C  D  R  P  L  D  K  G  L  S  G  W  E  *  S  T  L  V  M  M  T  Q  A  T
                    Query_2609   92   AACTACTATATACACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGAATAATCGACCCTAGTGATGATGACACAAGCTAC  181
V  94.6% (279/295)  IGHV1-46*01  91   .G.........G.......................................A...........A.........G..G.AG..........  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                        H  R  T  S  R  A  E  S  P  *  P  G  T  R  P  R  P  Q  S  T  W  N  *  A  A  *  D  L  R  T
                    Query_2609   182  GCACAGAACTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGACCACAGTCTACATGGAACTGAGCAGCCTGAGATCTGAGGAC  271
V  94.6% (279/295)  IGHV1-46*01  181  ........G........................................G...............G........................  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                        R  P  C  I  T  V  R  E  W  E  S  S  E  M  V  I  I  F  P  F  A  T  G  A  R  E  P  R  S  P
                    Query_2609   272  ACGGCCATGTATTACTGTGCGAGAGTGGGAGTCGTCAGAGATGGTTATAATATTCCCTTTCGCTACTGGGGCCAGGGAACCCAGGTCACC  361
V  94.6% (279/295)  IGHV1-46*01  271  ......G..................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  90.9% (10/11)    IGHD3-3*01   19   -----------------------------------------.......T...--------------------------------------  29
J  97.3% (36/37)    IGHJ4*02     11   --------------------------------------------------------------....................T.......  38

                                               
                                        S  P   
                    Query_2609   362  GTCTCCTCA  370
J  97.3% (36/37)    IGHJ4*02     39   .........  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_341354

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           371     6e-105
IGHD3-10*01                                                                                           19.9    0.15  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	TTCG	CTATGTTTCGGGG	TTCAGGG	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCATTCGCTATGTTTCGGGGTTCAGGGGGTATGGACGTC	AFAMFRGSGGMDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	241	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2610   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  98.4% (241/245)  IGHV3-74*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  K  S  D  G  S  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2610   91   TGTGGGTCTCACGTATTAAGAGTGATGGGAGTAGCACATACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (241/245)  IGHV3-74*01  137  ...................T..................AG..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  F  A  M  F  R  G  S  G  
                    Query_2610   181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCATTCGCTATGTTTCGGGGTTCAGGGG  270
V  98.4% (241/245)  IGHV3-74*01  227  .......G.........................................................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.3% (12/13)    IGHD3-10*01  7    ---------------------------------------------------------------------.....G.......--------  19
J  100.0% (45/45)   IGHJ6*02     18   -----------------------------------------------------------------------------------------.  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2610   271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (45/45)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_213984

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     3e-91
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ2*01                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	N/A	TATGATAGTCGTGGTTATTCCTA	TAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATATGATAGTCGTGGTTATTCCTATACCTACTGGTACTTCGATCTC	AKYDSRGYSYTYWYFDL	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  R  Y  G  M  N  W  V  R  Q  A  P  G  Q  G  L  
                    Query_2611   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTTAGCAGATATGGCATGAATTGGGTCCGCCAGGCTCCAGGGCAGGGGCTGG  90
V  91.9% (228/248)  IGHV3-23*01  47   ......................................T.......C....C.....GC.....................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  A  F  T  Y  Y  T  D  S  V  K  G  R  F  A  I  S  R  D  D  S  
                    Query_2611   91   AGTGGGTCTCAGGCATTAGTGGTAGCGGTGCTTTTACATACTACACAGACTCCGTGAAGGGCCGGTTCGCCATCTCCAGAGACGATTCCA  180
V  91.9% (228/248)  IGHV3-23*01  137  ............CT...........T....G.AGC.........G.......................A..............A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  H  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  Y  D  S  R  G  Y  S  
                    Query_2611   181  AGCACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTTTTGCGCGAAATATGATAGTCGTGGTTATTCCT  270
V  91.9% (228/248)  IGHV3-23*01  227  ..A......................................................AC..T......----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  91.3% (21/23)    IGHD3-22*01  8    --------------------------------------------------------------------.........A.........A..  29

                                      GT-------------------->                                  
                                      Y  T  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2611   271  ATACCTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  327
D  91.3% (21/23)    IGHD3-22*01  30   .--------------------------------------------------------  30
J  100.0% (53/53)   IGHJ2*01     1    ----.....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_236306

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           313     1e-87
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCGG	TTACGATTTCTGGAGTGGTTATTTTAC	GGACGGGTAT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCGGTTACGATTTCTGGAGTGGTTATTTTACGGACGGGTATCTGGTTCGACCCC	ARDSVTISGVVILRTGIWFDP	230	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	23	1	0	95.8
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	212	12	0	94.6


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  T  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  A  Y  I  S  S  S 
                    Query_2612   14   TCTGGATTCACCTTCACTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGCATACATTAGTAGTAGT  103
V  94.6% (212/224)  IGHV3-11*01  73   ................G.......................................................T.................  162
                                       S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  S  S  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  R  T  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  K  N  S  V  Y  L  Q  M  N 
                    Query_2612   104  GGTCGTACCAAATACTACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCCGGGACGACGCCAAGAACTCCGTGTATTTGCAAATGAAC  193
V  94.6% (212/224)  IGHV3-11*01  163  ...A......T...........................A............A.....A.............AC.....C...........  252
                                       G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><--------------------------CDR3-IMGT------------------
                                       S  L  R  A  G  D  T  A  V  Y  Y  C  A  R  D  S  V  T  I  S  G  V  V  I  L  R  T  G  I  W 
                    Query_2612   194  AGCCTGAGAGCCGGGGACACGGCCGTCTATTACTGTGCGAGAGATTCGGTTACGATTTCTGGAGTGGTTATTTTACGGACGGGTATCTGG  283
V  94.6% (212/224)  IGHV3-11*01  253  .............A............G.................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  92.6% (25/27)    IGHD3-3*01   4    -------------------------------------------------.........T.............A...--------------  30
J  100.0% (47/47)   IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2612   284  TTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  326
J  100.0% (47/47)   IGHJ5*02     9    ...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_263232

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           343     2e-96
IGHD2-8*02                                                                                            12.2    30   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTGGGCCGTTGGCC	TACTGG	GTCT	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  T  N  H  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2613   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCGTCAGTACCAACCACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (233/247)  IGHV3-53*01  47   ...............................G.............G....T......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  I  I  F  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  K  
                    Query_2613   91   AGTGGGTCTCAATTATTTTTAGTGGTGGAAGTACATACTACGCAGACTCCGTGAAGGGCCGATTCTCCATCTCCAGAGACAATTCCAAAA  180
V  94.3% (233/247)  IGHV3-53*01  137  ...........G......A...C.....T..C.................................A......................G.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT---------------------------------------------------->                               
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  M  Y  Y  C  A  R  D  W  A  V  G  L  L  G  
                    Query_2613   181  ACACACTATATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATGTATTACTGTGCGAGAGATTGGGCCGTTGGCCTACTGGGTC  270
V  94.3% (233/247)  IGHV3-53*01  227  ....G..G.......................................G...................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (6/6)     IGHD2-8*02   10   ---------------------------------------------------------------------------------......---  15

                                                                       
                                      L  G  Q  G  T  L  V  T  V  S  S  
                    Query_2613   271  TGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (32/32)   IGHJ4*02     17   -................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_71606

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            344     6e-97
IGHD6-13*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTT	GCAGAAGCTGGT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTGCAGAAGCTGGTTTTGACGAC	ARLAEAGFDD	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2614   1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTGGATTCACCTTTAGTAGATACTGGATGAGTTGGGTCCGCCAGGCTCCAGGTAAGGGGCTGG  90
V  94.4% (234/248)  IGHV3-7*01   47   .....................C..C.....................C..T........C....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  H  D  G  S  E  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_2614   91   AGTGGGTGGCCAACATAAAACATGATGGAAGTGAGACATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  94.4% (234/248)  IGHV3-7*01   137  ...................G..A.............A.................................................G...  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  V  Q  M  N  S  L  R  V  D  D  T  G  V  Y  Y  C  A  R  L  A  E  A  G  F  D  
                    Query_2614   181  AGAACTCACTGTATGTGCAAATGAACAGCCTGAGAGTCGACGACACGGGTGTGTATTACTGTGCGAGACTTGCAGAAGCTGGTTTTGACG  270
V  94.4% (234/248)  IGHV3-7*01   227  ..............C.....................C...G.......C...................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD6-13*01  8    -----------------------------------------------------------------------....C.......-------  19
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------......T  12

                                      ->                                  
                                      D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2614   271  ACTGGGGCCAGGGAACCCTGGTCACCGTGTCCTCAG  306
J  95.3% (41/43)    IGHJ4*02     13   ............................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_142821

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           297     7e-83
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACGGTAAAGGG	GGTTATTACT	GT	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACGGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTACGGACGTC	ARTVKGVITVYQYFATDV	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	98	16	0	86
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	216	26	0	89.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  R  P  G  K  G  L  E  
                    Query_2615   4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCGCCCAGGGAAGGGACTGGAGT  93
V  89.3% (216/242)  IGHV4-34*01  50   .....TCC...A...................G...T..................G..............C............G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  I  S  L  D  M  P  K  N  
                    Query_2615   94   GGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGAGTCTCCATATCATTAGACATGCCCAAGAATC  183
V  89.3% (216/242)  IGHV4-34*01  140  ............................C..................C..A...........A........G......C.T.......C.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  I  S  V  R  V  T  S  V  T  A  A  D  T  A  T  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y  
                    Query_2615   184  AGATCTCCGTGAGGGTGACGTCTGTGACCGCCGCGGACACGGCTACTTATTACTGTGCGAGAACGGTAAAGGGGGTTATTACTGTCTACC  273
V  89.3% (216/242)  IGHV4-34*01  230  ..T.....C...A.C...GC........................GTG...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD3-22*01  20   -------------------------------------------------------------------------..........-------  29
J  91.4% (53/58)    IGHJ6*02     5    -------------------------------------------------------------------------------------....T  9

                                      ------------------->                                 
                                      Q  Y  F  A  T  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2615   274  AGTACTTCGCTACGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  91.4% (53/58)    IGHJ6*02     10   .C....A..G..T........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_142822

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           308     4e-86
IGHD3-10*01                                                                                           12.2    33   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCCGATCA	ACTTTGGTT	TCTTGGGGCCACAGTCGGGATTG	TACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCCGATCAACTTTGGTTTCTTGGGGCCACAGTCGGGATTGTACTCTGACTAC	ARSPINFGFLGPQSGLYSDY	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	220	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  Y  G  G  S  L  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  K 
                    Query_2616   1    ACCCTGTCCCTCACCTGCTCTGTCTATGGTGGGTCCCTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGAAG  90
V  90.5% (220/243)  IGHV4-34*01  49   ..................G.................T..............................................G...G..  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  T  N  L  R  G  G  T  N  Y  H  P  S  L  K  S  R  A  S  I  S  T  D  A  R  K  N 
                    Query_2616   91   TGGATTGGGGAAACCAATCTTCGTGGAGGCACCAACTACCACCCGTCCCTCAAGAGTCGGGCCTCCATATCAACGGACGCGCGGAAGAAT  180
V  90.5% (220/243)  IGHV4-34*01  139  .............T.....A.A.....A...........A...................A.T.A........GTA...A..TCC.....C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  I  N  F  G  F  L  G 
                    Query_2616   181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCCGCGGACACGGCTGTATATTACTGTGCGAGAAGCCCGATCAACTTTGGTTTCTTGGGG  270
V  90.5% (220/243)  IGHV4-34*01  229  ...................GC..........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (8/9)      IGHD3-10*01  6    -------------------------------------------------------------------------...A.....--------  14

                                      GT------------------------>                                  
                                       P  Q  S  G  L  Y  S  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_2616   271  CCACAGTCGGGATTGTACTCTGACTACTGGGGCCAGGGCGCCCTGGTCACCGTCTCCTCAG  331
J  93.5% (43/46)    IGHJ4*02     3    ---------------....T..................AA.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_142823

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           385     5e-109
IGHD6-19*01                                                                                           16.1    2.6   
IGHJ5*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAGACGGGGTGTGTCT	GTGGCTGG	CTCGCCGGGT	AACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAGACGGGGTGTGTCTGTGGCTGGCTCGCCGGGTAACTCGTTCGACCCC	ARDRRGVSVAGSPGNSFDP	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  G  R  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_2617   2    CAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGGGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGTTAC  91
V  92.4% (268/290)  IGHV1-18*04  7    ...................C..........................T..A....................................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  A  T  N  Y  A  Q 
                    Query_2617   92   GGTATCAACTGGGTGCGCCAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCCCTTATAATGGTGCCACAAACTATGCACAG  181
V  92.4% (268/290)  IGHV1-18*04  97   .......G.........A.................G........................G....C......AA................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  F  Q  D  R  V  T  M  T  T  D  T  S  A  N  S  A  S  M  D  L  R  S  L  T  S  D  D  T  A 
                    Query_2617   182  AACTTCCAGGACAGAGTCACCATGACCACAGACACATCCGCCAACTCAGCCTCCATGGACCTGAGGAGCCTGACATCTGACGACACGGCC  271
V  92.4% (268/290)  IGHV1-18*04  187  ..GC......G............................A.G.G.A......A......G.............G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  A  R  D  R  R  G  V  S  V  A  G  S  P  G  N  S  F  D  P  W  G  Q  G  A  L  V 
                    Query_2617   272  GTCTATTACTGTGCGAGAGACAGACGGGGTGTGTCTGTGGCTGGCTCGCCGGGTAACTCGTTCGACCCCTGGGGCCAGGGAGCCCTGGTC  361
V  92.4% (268/290)  IGHV1-18*04  277  ..G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (8/8)     IGHD6-19*01  11   ------------------------------------........----------------------------------------------  18
J  95.9% (47/49)    IGHJ5*02     3    ------------------------------------------------------....G......................A........  38

                                                   
                                       T  V  S  S  
                    Query_2617   362  ACCGTCTCCTCAG  374
J  95.9% (47/49)    IGHJ5*02     39   .............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_142825

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           388     5e-110
IGHD3-10*01                                                                                           18.0    0.59  
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTAT	CAATTAGACT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATCAATTAGACTACTACTTTGACTAC	ARGLYYYQLDYYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	249	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2618   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  99.6% (249/250)  IGHV4-31*03  49   .........................................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2618   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  99.6% (249/250)  IGHV4-31*03  139  ..........................................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  Q  L 
                    Query_2618   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCTCTATTACTATCAATTA  270
V  99.6% (249/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-10*01  2    ---------------------------------------------------------------------------.........------  10

                                      ----------------->                                  
                                       D  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2618   271  GACTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  100.0% (48/48)   IGHJ4*02     1    ----................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_15338

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           310     1e-86
IGHD2-21*02                                                                                           33.4    1e-05
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTCCCCAAAA	ATTGTGGTGGTGACTGC	CCCTGC	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTCCCCAAAAATTGTGGTGGTGACTGCCCCTGCGACGAC	AKDLPKNCGGDCPCDD	234	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	233	114	98	7	9	86
CDR3-IMGT (germline)	234	241	8	8	0	0	100
Total	N/A	N/A	250	226	15	9	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2619   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAAGGGCTGG  90
V  90.4% (226/250)  IGHV3-30*18  47   ..................................................................................G.......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  A  Y  D  G  G  K  K  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  K  S  
                    Query_2619   91   AGTGGGTGGCATCTATTGCATATGATGGAGGAAAAAAATACTATGCGGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAAATCC-  179
V  90.4% (226/250)  IGHV3-30*18  137  ...........GT...AT...........A.T..T...........A..........A...........................T...A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                               L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  F  C  A  K  D  L  P  K  N  C  G  
                    Query_2619   180  --------CTGTATCTGCAGATGAACAGCCTGAGACCTGAAGACACGGCTGTGTATTTCTGTGCGAAAGATCTCCCCAAAAATTGTGGTG  261
V  90.4% (226/250)  IGHV3-30*18  227  AGAACACG...........A...............G....G................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (17/17)   IGHD2-21*02  6    ---------------------------------------------------------------------------------.........  14

                                      T------------------>                                  
                                      G  D  C  P  C  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2619   262  GTGACTGCCCCTGCGACGACTGGGGTCAGGGAACCCTGGTCACCGTCTCCTCAG  315
D  100.0% (17/17)   IGHD2-21*02  15   ........----------------------------------------------  22
J  95.0% (38/40)    IGHJ4*02     9    --------------...T.......C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_15339

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            319     2e-89
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCCACCCGAAAA	TATGACAGTGGTGATTATT	CCTCCCACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCACCCGAAAATATGACAGTGGTGATTATTCCTCCCACCCCTTTGGCTAC	STRKYDSGDYSSHPFGY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	103	11	0	90.4
Total	N/A	N/A	240	222	18	0	92.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  T  N  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_2620   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTACTAACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  92.5% (222/240)  IGHV4-4*02   49   ..............................................G...........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  N  G  E  I  Y  R  G  G  S  P  N  Y  N  P  S  L  K  S  R  V  P  I  S  L  D  E  S  K 
                    Query_2620   91   GAGTGGAATGGGGAAATCTATCGCGGTGGGAGCCCCAACTACAACCCGTCCCTCAAGAGTCGGGTCCCCATTTCACTAGACGAGTCCAAA  180
V  92.5% (222/240)  IGHV4-4*02   139  .......T..............ATA........A............................A...A....A...G.....A.......G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  R  R  T  S  V  A  A  A  D  T  A  V  Y  Y  C  S  T  R  K  Y  D  S  G  D  Y 
                    Query_2620   181  AACCAGTTCTCCCTGCGGCGGACCTCTGTGGCCGCCGCGGACACGGCCGTGTATTACTGTTCCACCCGAAAATATGACAGTGGTGATTAT  270
V  92.5% (222/240)  IGHV4-4*02   229  ...............AA..T..G.......A.............................------------------------------  288
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  84.2% (16/19)    IGHD3-22*01  8    ------------------------------------------------------------------------.....T...A...G....  25

                                      -------------------->                                  
                                       S  S  H  P  F  G  Y  G  G  Q  G  T  L  V  T  V  S  S  
                    Query_2620   271  TCCTCCCACCCCTTTGGCTACGGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  84.2% (16/19)    IGHD3-22*01  26   .------------------------------------------------------  26
J  95.5% (42/44)    IGHJ4*02     5    -----------.....A....T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_15336

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            366     2e-103
IGHD3-3*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGTAGTCAAG	ACGATTTTTGGAGTGGTT	TGTTCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTAGTCAAGACGATTTTTGGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTC	ARDGSQDDFWSGLFHYYYGMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  P  P  G  K  G  L  
                    Query_2621  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGGTATTGGATGAGTTGGGTCCGCCAACCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-7*03  47   ..............................................C...........C...........GG..................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_2621  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (242/250)  IGHV3-7*03  137  ........................................................A.................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><---------------------------
                                     K  N  S  V  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  Q  D  D  F  
                    Query_2621  181  AGAACTCAGTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAGAGATGGTAGTCAAGACGATTTTT  270
V  96.8% (242/250)  IGHV3-7*03  227  ........C........C..................................G.................--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-3*01  6    ---------------------------------------------------------------------------------.........  14

                                     -CDR3-IMGT--------------------------->                                 
                                     W  S  G  L  F  H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2621  271  GGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  100.0% (18/18)   IGHD3-3*01  15   .........--------------------------------------------------------------  23
J  96.4% (54/56)    IGHJ6*02    7    ---------------.......C..C.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_71600

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           344     6e-97
IGHD3-3*01                                                                                            43.0    2e-08
IGHJ5*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGGCGAGGCC	GTATTACGACTTTTGGAGTGGTTGTTAT	CGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGCGAGGCCGTATTACGACTTTTGGAGTGGTTGTTATCGGCTGGTTCGACCCC	ARGGRGRITTFGVVVIGWFDP	240	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	232	12	0	95.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_2622   4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTATTATTGGAGCTGGATCCGCCAGTCTCCAGGGAAGGGGCTGGAAT  93
V  95.1% (232/244)  IGHV4-34*01  50   .....TCC...A..................................C..C..................C.C.................G.  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  K  K  
                    Query_2622   94   GGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAAGAAAC  183
V  95.1% (232/244)  IGHV4-34*01  140  ...........................................................G............................C.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------------CDR3-IM
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  R  G  R  I  T  T  F  
                    Query_2622   184  AGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGGGGCGAGGCCGTATTACGACTTTTG  273
V  95.1% (232/244)  IGHV4-34*01  230  ...................C............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  92.9% (26/28)    IGHD3-3*01   1    ---------------------------------------------------------------------------.........T.....  15

                                      GT-------------------------->                                  
                                      G  V  V  V  I  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2622   274  GAGTGGTTGTTATCGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  336
D  92.9% (26/28)    IGHD3-3*01   16   ........A....--------------------------------------------------  28
J  97.9% (46/47)    IGHJ5*02     5    ----------------..........................................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_15334

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           349     2e-98
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGTCGTATTCTTT	TGATAGTAGTGGT	CAGAGTCCCGCG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGTCGTATTCTTTTGATAGTAGTGGTCAGAGTCCCGCGTACTTTGACTAC	ARDLSYSFDSSGQSPAYFDY	237	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	24	0	0	100
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	21	3	0	87.5
FR3-IMGT	123	236	114	113	1	0	99.1
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	233	228	5	0	97.9


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  C  I 
                    Query_2623   12   TGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATGCATC  101
V  97.9% (228/233)  IGHV3-21*01  64   .....................................................................................C...T  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_2623   102  AGTGGTGGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTG  191
V  97.9% (228/233)  IGHV3-21*01  154  ...A..A...................................................................................  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------------------CDR3-IMGT----------
                                       Q  M  N  S  L  R  T  E  D  T  A  V  Y  Y  C  A  R  D  L  S  Y  S  F  D  S  S  G  Q  S  P 
                    Query_2623   192  CAAATGAACAGCCTGAGAACCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGTCGTATTCTTTTGATAGTAGTGGTCAGAGTCCC  281
V  97.9% (228/233)  IGHV3-21*01  244  ..................G..................................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (13/13)   IGHD3-22*01  10   --------------------------------------------------------------------.............---------  22

                                      -------------->                                  
                                       A  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_2623   282  GCGTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  330
J  97.8% (45/46)    IGHJ4*02     3    ---........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_15335

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           329     3e-92
IGHD3-10*01                                                                                           39.1    3e-07
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	G	ACTATGGAACGGGGAGTTATTATAAC	AAGACCC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACTATGGAACGGGGAGTTATTATAACAAGACCCATGGACGTC	EDYGTGSYYNKTHGR	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	30	30	28	1	1	93.3
CDR1-IMGT	31	54	24	21	3	0	87.5
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	129	24	20	4	0	83.3
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	231	16	1	93.1


Alignments

                                      <----------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT-------
                                         S  L  R  P  L  L  C  S  L  W  I  Q  L  Q  S  L  W  H  A  L  G  P  P  G  S  R  Q  G  A  
                    Query_2624   1    GGTCCCTGAGACCTCTCCTGTGCAGTCTCTGGATTCAGCTTCAGTCACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTG  90
V  93.1% (231/248)  IGHV3-30*18  47   ............-............C...........C.......AG...........................................  135
                                         S  L  R   L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L 

                                      --------------><-------CDR2-IMGT------><--------------------------------------------------
                                      G  V  G  G  S  Y  S  I  *  *  K  F  *  I  L  R  S  L  R  E  G  P  I  Y  H  L  Q  R  Q  F  
                    Query_2624   91   GAGTGGGTGGCAGTTATAGCATATGATGAAAGTTTTAAATCTTACGCAGCCTCCGTGAAGGGCCGATTTACCATCTCCAGAGACAATTCC  180
V  93.1% (231/248)  IGHV3-30*18  136  ..................T.........G....AA.....AC..T....A..................C.....................  225
                                       E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                      Q  E  H  A  V  S  A  N  E  Q  P  E  R  *  G  H  G  C  V  L  L  C  E  D  Y  G  T  G  S  Y  
                    Query_2624   181  AAGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGATGAGGACACGGCTGTGTATTATTGTGCGAAGACTATGGAACGGGGAGTTATT  270
V  93.1% (231/248)  IGHV3-30*18  226  ....A................................C.....................C........----------------------  293
                                       K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                         
D  92.3% (24/26)    IGHD3-10*01  6    ---------------------------------------------------------------------.......TT............  26

                                      GT------------------>                           
                                      Y  N  K  T  H  G  R  L  G  P  R  D  H  G  H  R  
                    Query_2624   271  ATAACAAGACCCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  318
D  92.3% (24/26)    IGHD3-10*01  27   .....-------------------------------------------  31
J  100.0% (36/36)   IGHJ6*02     21   ------------....................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_237564

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD3-16*02                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTATCG	ACATTGGTTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTATTTGACTAT	ARHYRHWLFDY	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	238	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  L  T  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_2625   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCCTCACCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (238/251)  IGHV4-39*01  49   ...............................G....A...G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2625   91   CTGGAGTGGATTGGGAGTTTGTATTATAGTGGCAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  94.8% (238/251)  IGHV4-39*01  139  ..................A.C...........G...............................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  H  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  H  W  L  F 
                    Query_2625   181  AAGAACCACTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACATTATCGACATTGGTTATTT  270
V  94.8% (238/251)  IGHV4-39*01  229  ........G..C........G....G...T.......................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-16*02  25   -----------------------------------------------------------------------......-------------  30
J  97.7% (42/43)    IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2625   271  GACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  97.7% (42/43)    IGHJ4*02     9    .....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_237565

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           353     9e-100
IGHD3-16*02                                                                                           35.3    4e-06 
IGHJ5*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGTGACC	ATGATGACGTTTGGGGGATTTGTCGTT	N/A	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGTGACCATGATGACGTTTGGGGGATTTGTCGTTCC	ARVGDHDDVWGICRS	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  I  Y  Y  W  S  W  I  R  Q  P  P  G  K  R 
                    Query_2626   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTATTTACTACTGGAGCTGGATCCGACAGCCCCCAGGGAAGAGA  90
V  95.2% (238/250)  IGHV4-61*01  49   .................................................G.....................G...............G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  M  Y  Y  S  G  S  P  K  Y  N  P  S  L  K  S  R  A  T  I  S  L  H  T  S 
                    Query_2626   91   CTGGAGTGGATTGGGTATATGTATTACAGTGGGAGCCCCAAGTACAACCCCTCCCTCAAGAGTCGAGCCACCATATCATTACACACGTCC  180
V  95.2% (238/250)  IGHV4-61*01  139  ....................C...............A....C.........................T..........G..G........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  E  L  S  S  V  G  A  A  D  T  A  V  Y  Y  C  A  R  V  G  D  H  D  D  V 
                    Query_2626   181  AAGAACCAGTTCTCCCTGGAGCTGAGCTCTGTGGGCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTAGGTGACCATGATGACGTT  270
V  95.2% (238/250)  IGHV4-61*01  229  ..................A..............AC...................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (24/27)    IGHD3-16*02  6    -------------------------------------------------------------------------------.....T.....  16

                                      ----------------->                                  
                                       W  G  I  C  R  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2626   271  TGGGGGATTTGTCGTTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  88.9% (24/27)    IGHD3-16*02  17   .......G..A.....------------------------------------  32
J  100.0% (36/36)   IGHJ5*02     16   ----------------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_15331

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            329     3e-92
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ3*02                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	GTCAGCGTACTGG	TATTGTTCGGG	CCGCCCCCTACGCTGGTCC	TGAGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAGTCAGCGTACTGGTATTGTTCGGGCCGCCCCCTACGCTGGTCCTGAGATT	AKDSQRTGIVRAAPYAGPEI	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	252	10	9	1	0	90
Total	N/A	N/A	252	231	21	0	91.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  F  T  F  K  L  Y  A  M  H  W  V  R  L  A  P  G  K  G  L  
                    Query_2627   1    GGTCCCTGAGACTCTCCTGTGAAGGCTCTGGATTCACCTTTAAACTGTATGCCATGCACTGGGTCCGGCTAGCTCCAGGGAAGGGCCTGG  90
V  91.7% (231/252)  IGHV3-9*01   47   .....................C..C................G.TGAT......................A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  W  N  S  A  S  M  G  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_2627   91   AGTGGGTCTCAAGTATTAGTTGGAATAGTGCTAGCATGGGCTATGCGGACTCTGTGAAGGGCCGATTCACCGTTTCCAGAGACAACGCCA  180
V  91.7% (231/252)  IGHV3-9*01   137  ...........G..................G......A.................................A.C................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  V  E  D  T  A  F  Y  Y  C  A  K  D  S  Q  R  T  G  I  
                    Query_2627   181  AGAACTCCGTGTATTTACAAATGAACAGTCTCAGAGTTGAGGACACGGCCTTCTACTACTGTGCGAAAGATAGTCAGCGTACTGGTATTG  270
V  91.7% (231/252)  IGHV3-9*01   227  ........C.....C.G..............G....C...............G..T........A.......------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  90.9% (10/11)    IGHD3-10*01  8    -------------------------------------------------------------------------------------...G.  12

                                      R3-IMGT------------------------>                                  
                                      V  R  A  A  P  Y  A  G  P  E  I  W  G  Q  G  T  M  V  S  V  T  S  
                    Query_2627   271  TTCGGGCCGCCCCCTACGCTGGTCCTGAGATTTGGGGCCAAGGGACAATGGTCAGCGTCACTTCAG  336
D  90.9% (10/11)    IGHD3-10*01  13   ......------------------------------------------------------------  18
J  90.2% (37/41)    IGHJ3*02     10   -------------------------...T..C......................C....T......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_302409

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCAC	ARAPPFDYDLDVRGIHNFDH	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_2628   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  94.7% (230/243)  IGHV4-59*01  50   .....TCC...A....C.........................G...............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S  
                    Query_2628   94   GGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAGCC  183
V  94.7% (230/243)  IGHV4-59*01  140  .........A.................G.............................................A.............A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D  
                    Query_2628   184  AGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGACG  273
V  94.7% (230/243)  IGHV4-59*01  230  .................AG...........................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD3-22*01  6    ---------------------------------------------------------------------------........-------  13

                                      T------------------------>                                  
                                      V  R  G  I  H  N  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2628   274  TAAGGGGAATCCACAACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
J  97.8% (44/45)    IGHJ4*02     4    ---------------........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_213982

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           332     4e-93
IGHD3-22*01                                                                                           21.8    0.043
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TGCCCGCGACGATGAAAAGTATTACTCCTT	TAGTAGTGGTT	TTTCCCCATTTAGCT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGCCCGCGACGATGAAAAGTATTACTCCTTTAGTAGTGGTTTTTCCCCATTTAGCTCC	ASARDDEKYYSFSSGFSPFSS	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  F  W  N  W  I  R  Q  R  P  G  K  G 
                    Query_2629   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTGGTGATTACTTCTGGAACTGGATCCGCCAACGCCCAGGGAAGGGC  90
V  92.7% (230/248)  IGHV4-31*03  49   .........................................C.......G.....A.....G............G.A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  Y  M  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  T 
                    Query_2629   91   CTGGAGTGGATTGCGTATATGTATTACAGTGGGAGCACCTACTACAATCCGTCCCTGAAGAGTCGAGTTACCATCTCAATAGACACGACT  180
V  92.7% (230/248)  IGHV4-31*03  139  .............G...C..C..........................C........C.................A...G........T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  H  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  A  R  D  D  E  K  Y 
                    Query_2629   181  AAGAACCACTTCTCCCTGAGGCTGAACTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGTGCCCGCGACGATGAAAAGTAT  270
V  92.7% (230/248)  IGHV4-31*03  229  ........G..........A.....G...........................G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      CDR3-IMGT-------------------------->                                  
                                       Y  S  F  S  S  G  F  S  P  F  S  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2629   271  TACTCCTTTAGTAGTGGTTTTTCCCCATTTAGCTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  100.0% (11/11)   IGHD3-22*01  13   --------...........---------------------------------------------------  23
J  100.0% (36/36)   IGHJ5*02     16   ----------------------------------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_213983

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD6-6*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTC	ATTREQLVPIFDF	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	268	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  L  T  S  Y
                    Query_2630   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGCAAGGGCTCTGGATATAGCTTAACCAGTTA  90
V  93.4% (268/287)  IGHV5-51*01  6    ............................................................T.....T........C.....T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  V  P  G  K  G  L  E  W  I  G  I  I  Y  P  A  D  S  E  T  K  Y  S  P
                    Query_2630   91   TTGGATCGCCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATTGGGATCATCTATCCTGCTGACTCTGAAACCAAATACAGCCC  180
V  93.4% (268/287)  IGHV5-51*01  96   C.......G.............A.........................G................G.........T....G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  S  S  S  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2630   181  GTCCTTCCAAGGCCAGGTCACCATCTCGGCCGACAAGTCCAGCAGCTCCGCCTTCTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (268/287)  IGHV5-51*01  186  ...........................A.............T....A......A.C..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        I  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2630   271  CATATATTATTGTGCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTCTGGGGGCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  93.4% (268/287)  IGHV5-51*01  276  ...G.....C.......---------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------.......A......C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_340402

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           364     5e-103
IGHD6-6*01                                                                                            23.8    0.011 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	TC	ATAGCAGCTCGT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACTCATAGCAGCTCGTACTACTTTGACTAC	TTHSSSYYFDY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	30	0	0	100
FR3-IMGT	135	248	114	110	4	0	96.5
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	243	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  T  W  M  S  W  V  R  Q  A  P  G  K  G  P  
                    Query_2631   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAACACCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  96.0% (243/253)  IGHV3-15*01  47   .......T.............................T.........G.......................................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  A  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  V  S  R  D  
                    Query_2631   91   AGTGGGTCGCCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCGTCTCAAGAGATG  180
V  96.0% (243/253)  IGHV3-15*01  137  .......T.G...................................................................A............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  L  K  N  T  L  Y  L  Q  M  N  S  L  K  I  E  D  T  A  V  Y  Y  C  T  T  H  S  S  S  Y  
                    Query_2631   181  ATTTAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAATCGAGGACACAGCCGTGTATTATTGTACCACTCATAGCAGCTCGTACT  270
V  96.0% (243/253)  IGHV3-15*01  227  ...C......................................C.....................C........-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (12/12)   IGHD6-6*01   5    ---------------------------------------------------------------------------............---  16
J  100.0% (48/48)   IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2631   271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_102956

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD4-17*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCGGGGAGAGATT	CTACGGTGACT	CGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCGGGGAGAGATTCTACGGTGACTCGGTTGACTAC	AKVGERFYGDSVDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  F  S  D  Y  D  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2632   1    GGTCCCTGAGACTCTCCTGTACAGCCTCAGGATTCATCTTTAGCGATTATGACCTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-23*01  47   ....................G.......T.......C.......AGC....C.A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  N  D  V  G  D  R  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  S  
                    Query_2632   91   AGTGGGTCTCAACTATTAATGATGTTGGTGATAGGACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACACTTCCA  180
V  92.4% (230/249)  IGHV3-23*01  137  ...........G......G..G.AG.....G...C.................................................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  K  A  E  D  T  A  V  Y  Y  C  A  K  V  G  E  R  F  Y  G  
                    Query_2632   181  AGAACACACTGTATCTGCAAATGAACAGCCTGAAAGCCGAGGACACGGCCGTATATTATTGTGCGAAAGTCGGGGAGAGATTCTACGGTG  270
V  92.4% (230/249)  IGHV3-23*01  227  .......G.........................G........................C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD4-17*01  4    ----------------------------------------------------------------------------------........  11

                                      ------------->                                  
                                      D  S  V  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_2632   271  ACTCGGTTGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  318
D  100.0% (11/11)   IGHD4-17*01  12   ...---------------------------------------------  14
J  97.6% (41/42)    IGHJ4*02     7    ------..............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_102950

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           347     8e-98
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ6*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCA	ATATTGTAGTAGTACCA	AGTGTCCCGACCCC	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATCAATATTGTAGTAGTACCAAGTGTCCCGACCCCTACTACTACTACTACAATCTGGACGTC	AKDQYCSSTKCPDPYYYYYNLDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  H  Y  G  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2633   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATCACTATGGTTTACACTGGGTCCGCCAGGCGCCAGGCAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-30*18  47   ..........................................G.AG......CA.G.................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  F  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_2633   91   AGTGGGTGGCAGTTATTTCATTTGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCA  180
V  94.4% (236/250)  IGHV3-30*18  137  ................A....A.................................................A..................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  Q  Y  C  S  S  T  
                    Query_2633   181  GGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCGGAGGACACGGCTTTGTATTACTGTGCAAAAGATCAATATTGTAGTAGTACCA  270
V  94.4% (236/250)  IGHV3-30*18  227  A....................................T............G.............G.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (17/17)   IGHD2-2*01   4    -------------------------------------------------------------------------.................  20

                                      --CDR3-IMGT----------------------------->                                 
                                      K  C  P  D  P  Y  Y  Y  Y  Y  N  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2633   271  AGTGTCCCGACCCCTACTACTACTACTACAATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
J  95.0% (57/60)    IGHJ6*02     3    --------------...............GG.A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_102951

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           353     9e-100
IGHD6-13*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	CCCC	ATAGCAGCAGCTCGTAC	AG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGACCCCATAGCAGCAGCTCGTACAGTTGACTAC	VGDPIAAARTVDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2634   1    GGTCCCTGAGACTCTCCTGTGCTGCCTCTGGATTCACCTTCAATACCTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  95.2% (238/250)  IGHV3-21*01  47   ......................A...................G..G.....G.................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  Y  Y  I  Y  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  A  
                    Query_2634   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTTATTACATATACTACGCAGACTCAGTGACGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-21*01  137  .............................AG..........................A................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  G  D  P  I  A  A  A  R  
                    Query_2634   181  AGAACTCACTGTATCTCCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGTGGGAGACCCCATAGCAGCAGCTCGTA  270
V  95.2% (238/250)  IGHV3-21*01  227  ................G...................................G..........C.A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  94.1% (16/17)    IGHD6-13*01  5    --------------------------------------------------------------------------............G...  20

                                      ---------->                                  
                                      T  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2634   271  CAGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
D  94.1% (16/17)    IGHD6-13*01  21   .--------------------------------------------  21
J  100.0% (42/42)   IGHJ4*02     7    ---..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_102952

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           375     2e-106
IGHD3-9*01                                                                                            14.1    8.2   
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTTTGAC	CACGGCTTAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTGACCACGGCTTATACTACTTTGACTAC	ARDFDHGLYYFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  N  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2635   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCAATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.0% (245/250)  IGHV3-33*01  47   ...............................................T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  D  K  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_2635   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTGATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCA  180
V  98.0% (245/250)  IGHV3-33*01  137  ................................A......................................A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  D  H  G  L  Y  
                    Query_2635   181  AGAACACGCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGATTTTGACCACGGCTTATACT  270
V  98.0% (245/250)  IGHV3-33*01  227  ............A.......................................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-9*01   12   ----------------------------------------------------------------------.......-------------  18
J  100.0% (48/48)   IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2635   271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_102953

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           304     9e-85
IGHD3-22*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	AATTCC	GATGGTAGTGGCTAT	CCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAAATTCCGATGGTAGTGGCTATCCCCTTGACTAC	ARNSDGSGYPLDY	237	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	20	4	0	83.3
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	105	9	0	92.1
CDR3-IMGT (germline)	237	242	6	5	1	0	83.3
Total	N/A	N/A	230	212	18	0	92.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  P  F  S  S  S  G  M  H  W  V  R  Q  A  P  G  K  G  L  A  W  V  A  V  I  
                    Query_2636   13   GTGCAGCCTCTGGATTCCCCTTCAGTAGTTCTGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGGCGTGGGTGGCAGTTATAT  102
V  92.2% (212/230)  IGHV3-33*01  65   .......G.........A..........C.A...C................................G....A.................  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      W  N  D  G  S  N  K  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  I  L  Y  L  
                    Query_2636   103  GGAATGATGGAAGTAATAAATACTATGCAGAGTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACATTCTGTATCTGC  192
V  92.2% (212/230)  IGHV3-33*01  155  ..T............................C..............................................CG..........  244
                                      W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------CDR3-IMGT-------------->       
                                      Q  M  N  R  L  G  A  E  D  T  A  I  Y  Y  C  A  R  N  S  D  G  S  G  Y  P  L  D  Y  W  G  
                    Query_2636   193  AAATGAATCGACTGGGAGCCGAGGACACGGCTATTTATTACTGTGCGCGAAATTCCGATGGTAGTGGCTATCCCCTTGACTACTGGGGCC  282
V  92.2% (212/230)  IGHV3-33*01  245  .......CA.C...A.................G.G............A..----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  86.7% (13/15)    IGHD3-22*01  11   --------------------------------------------------------...A.......T...-------------------  25
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------------------------------...............  21

                                                                 
                                      Q  G  I  L  V  T  V  S  S  
                    Query_2636   283  AGGGAATCCTGGTCACCGTCTCCTCAG  309
J  97.6% (41/42)    IGHJ4*02     22   ......C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_102958

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           369     2e-104
IGHD2-2*01                                                                                            12.2    37    
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAGCCACAATTAGTCCG	AGTAGT	TT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCCACAATTAGTCCGAGTAGTTTCTACTACGGTATGGACGTC	ARDLATISPSSFYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	263	27	0	90.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  T  V  S  C  K  S  S  G  Y  T  F  T  S  Y 
                    Query_2637   2    CAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGACGGTCTCCTGCAAGTCTTCTGGGTACACCTTTACCAGTTAC  91
V  90.7% (263/290)  IGHV1-18*04  7    ...................C.............................A.............G.......T..............C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  Y  Y  A  Q 
                    Query_2637   92   GGCATCACCTGGGTGCGGCAGGCCCCTGGACAGGGCCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACATACTATGCACAG  181
V  90.7% (263/290)  IGHV1-18*04  97   ..T....G.........A..............A..G.............................C......A.....A...........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  M  T  R  N  T  S  T  S  T  V  H  M  E  V  R  G  L  T  S  D  D  T  A 
                    Query_2637   182  ATGGTCCGCGACAGAGTCACCATGACCAGGAATACATCCACGAGCACAGTCCACATGGAGGTGAGGGGCCTGACATCTGACGACACGGCC  271
V  90.7% (263/290)  IGHV1-18*04  187  .A.C...AG.G.................CAG.C................C.T........C.....A......G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  I  S  P  S  S  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_2637   272  GTGTATTACTGTGCGAGAGATTTAGCCACAATTAGTCCGAGTAGTTTCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACC  361
V  90.7% (263/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD2-2*01   11   ---------------------------------------......---------------------------------------------  16
J  100.0% (52/52)   IGHJ6*02     11   -----------------------------------------------...........................................  53

                                               
                                       V  S  S 
                    Query_2637   362  GTCTCCTCA  370
J  100.0% (52/52)   IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_340400

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           372     2e-105
IGHD2-2*01                                                                                            21.8    0.041 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAG	TTGTAGTAGTA	ACCCCTG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGTTGTAGTAGTAACCCCTGCTACTACGAAATGGACGTC	ARVSCSSNPCYYEMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	241	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2638   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.8% (241/244)  IGHV4-59*01  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2638   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGGTAGACACGTCCAAGAAC  180
V  98.8% (241/244)  IGHV4-59*01  139  .......................................................................A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  C  S  S  N  P  C  Y 
                    Query_2638   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTAAGTTGTAGTAGTAACCCCTGCTAC  270
V  98.8% (241/244)  IGHV4-59*01  229  ...............................................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (11/11)   IGHD2-2*01   7    --------------------------------------------------------------------...........-----------  17
J  96.2% (50/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2638   271  TACGAAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  96.2% (50/52)    IGHJ6*02     15   ....GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_77031

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     6e-96
IGHD1-26*01                                                                                           23.8    0.012
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTTAAGATGCCAGACC	AGTGGGAACTACTAC	GGGG	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTTAAGATGCCAGACCAGTGGGAACTACTACGGGGTTACTACTACTACTTCGATATGGACGTC	AKDLKMPDQWELLRGYYYYFDMDV	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  F  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_2639   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGGTCCTTTGCCATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ...........................................CAG..A........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  N  T  Y  Y  A  D  S  V  K  G  R  F  T  M  S  R  D  N  S  
                    Query_2639   91   AGTGGGTCTCAGGTATTAGTGGGAGTGGTGGTAACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATGTCCAGAGACAATTCGA  180
V  93.6% (234/250)  IGHV3-23*01  137  ............C.........T..........G.......................................C..............C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  E  T  L  R  A  E  D  T  A  V  Y  F  C  A  K  D  L  K  M  P  D  Q  
                    Query_2639   181  AGAACACGCTATATCTGCAAATGGAAACCCTGAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAAAGATCTTAAGATGCCAGACCAGT  270
V  93.6% (234/250)  IGHV3-23*01  227  ..........G............A.C.G.............................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (14/15)    IGHD1-26*01  6    ---------------------------------------------------------------------------------------...  8

                                      ----CDR3-IMGT------------------------------>                                 
                                      W  E  L  L  R  G  Y  Y  Y  Y  F  D  M  D  V  W  G  R  G  T  S  V  P  V  S  S 
                    Query_2639   271  GGGAACTACTACGGGGTTACTACTACTACTTCGATATGGACGTCTGGGGCCGAGGGACCTCGGTCCCCGTCTCCTCA  347
D  93.3% (14/15)    IGHD1-26*01  9    ....G.......-----------------------------------------------------------------  20
J  91.8% (56/61)    IGHJ6*02     2    ----------------..............A..G.................A.......A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_259449

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           419     2e-119
IGHD1-1*01                                                                                            14.1    9.0   
IGHJ3*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-1*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCATATATAGT	CTGGAAC	C	TATCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCATATATAGTCTGGAACCTATC	ATIYSLEPI	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	286	277	9	0	96.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  L 
                    Query_2640   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGGTACACCTTTACCAGCCTT  91
V  96.9% (277/286)  IGHV1-18*01  7    .......................................................................T...............TA.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_2640   92   GGTTTCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAG  181
V  96.9% (277/286)  IGHV1-18*01  97   ...A...G..................................................................................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  D  R  V  S  V  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_2640   182  AAGCTCCAGGACAGAGTCTCCGTGACCACAGACACATCCACGAGCACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.9% (277/286)  IGHV1-18*01  187  ..........G.......A..A......................................C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------CDR3-IMGT-------->                                  
                                       V  Y  Y  C  A  T  I  Y  S  L  E  P  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_2640   272  GTGTATTACTGTGCGACCATATATAGTCTGGAACCTATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  344
V  96.9% (277/286)  IGHV1-18*01  277  ................---------------------------------------------------------  292
                                       V  Y  Y  C  A                                                           
D  100.0% (7/7)     IGHD1-1*01   8    ---------------------------.......---------------------------------------  14
J  97.4% (37/38)    IGHJ3*02     13   -----------------------------------...................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_259448

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           339     2e-95
IGHD2-15*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATGAAA	GATATTGTAGTGAAGGTAGTTGCT	TCCCTACA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTTCCCTACATACTTTGACTTC	ARYERYCSEGSCFPTYFDF	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	96	18	0	84.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	253	36	0	87.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  K  I  S  C  K  T  S  G  Y  S  F  S  N  Y
                    Query_2641   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAAAAGCCCGGGCAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGTTTCAGCAACTA  90
V  87.5% (253/289)  IGHV5-51*01  6    .....................A..................G.......................GG............C..T.C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  S  G  E  G  L  E  W  M  G  I  I  Y  A  G  D  S  D  I  T  Y  S  P
                    Query_2641   91   TTGGATCGGCTGGGTGCGCCAGATGTCCGGTGAAGGCCTGGAGTGGATGGGAATCATCTATGCTGGCGACTCTGACATTACATATAGTCC  180
V  87.5% (253/289)  IGHV5-51*01  96   C........................C....GA...................G.........C....T........T.CC.G...C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  R  V  T  I  S  V  D  K  A  I  D  T  A  Y  V  Q  W  S  N  L  K  A  S  D  T  A
                    Query_2641   181  GTCCTTTGAGGGCCGGGTCACCATCTCAGTCGACAAGGCCATCGACACCGCCTACGTACAGTGGAGCAATCTAAAGGCCTCGGACACCGC  270
V  87.5% (253/289)  IGHV5-51*01  186  ......CC.A....A..............C.......T.....AG..........C.G..........GC..G.................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        T  Y  Y  C  A  R  Y  E  R  Y  C  S  E  G  S  C  F  P  T  Y  F  D  F  W  G  Q  V  T  P  V
                    Query_2641   271  CACATATTACTGTGCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTTCCCTACATACTTTGACTTCTGGGGCCAGGTAACCCCGGT  360
V  87.5% (253/289)  IGHV5-51*01  276  ..TG...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  87.5% (21/24)    IGHD2-15*01  3    --------------------------............GT.....C....----------------------------------------  26
J  93.5% (43/46)    IGHJ4*02     3    ----------------------------------------------------------..........A...........G.....T...  34

                                                    
                                        T  V  S  S  
                    Query_2641   361  CACCGTCTCCTCAG  374
J  93.5% (43/46)    IGHJ4*02     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_75253

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2642   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2642   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_2642   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2642   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_259443

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_2643   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG..G.T..................................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_2643   91   TGGATTGGATATATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  93.4% (228/244)  IGHV4-59*01  139  ........G...................G.....A............................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W 
                    Query_2643   181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------------------------------------------....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_2643   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (35/35)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_259442

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            361     4e-102
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	TTGGCAATTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGGCAATTCCTACGCTATGGACGTC	ARVGNSYAMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2644  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-7*01  47   .........................................................G................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  H  D  G  S  E  K  K  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2644  91   AATGGGTGGCCAACATAAAACACGATGGAAGTGAGAAAAAGTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (240/249)  IGHV3-7*01  137  .G.................G..A...............T.C.................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                     K  N  S  L  Y  L  Q  V  T  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  N  S  Y  A  M  
                    Query_2644  181  AGAACTCACTGTATCTGCAAGTGACCAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGTTGGCAATTCCTACGCTATGG  270
V  96.4% (240/249)  IGHV3-7*01  227  ....................A...A...........................G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  98.0% (48/49)    IGHJ6*02    14   -------------------------------------------------------------------------------.....G.....  24

                                     ---->                                 
                                     D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2644  271  ACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  308
J  98.0% (48/49)    IGHJ6*02    25   ......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_104320

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           296     2e-82
IGHD2-2*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACAAACTGCTA	CTATCAAATGGACGT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACAAACTGCTACTATCAAATGGACGTC	ARVDCSSTNCYYQMDV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	216	27	0	88.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  H  G  Q  G  L  E  
                    Query_2645   4    CCCTGAGACTCTCCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCACGGGCAGGGACTGGAGT  93
V  88.9% (216/243)  IGHV4-59*01  50   .....TCC...A................T..........G.AG.T...........................CA...A............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  N  N  
                    Query_2645   94   GGGTTGGATATATCTATTATAGAGGGAGTACTAAGTACAACCCCTCCCTCAAGGGTCGGGTCACCATATCAGTAGACACGTCCAACAATG  183
V  88.9% (216/243)  IGHV4-59*01  140  ..A....G...........C..T.....C..C..C..................A....A..........................G..CC  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  N  C  Y  
                    Query_2645   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACAAACTGCTACT  273
V  88.9% (216/243)  IGHV4-59*01  230  ..............................CT..............G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  85.0% (17/20)    IGHD2-2*01   8    --------------------------------------------------------------------........T..C.G......--  27

                                      ------------->                                  
                                      Y  Q  M  D  V  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2645   274  ATCAAATGGACGTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (35/35)   IGHJ4*02     14   -------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_259446

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     7e-98
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTCC	ATAGTGCTTACGAGTAC	GGGAAAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCTCCATAGTGCTTACGAGTACGGGAAATTGGTTCGACCCC	ASSIVLTSTGNWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	232	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  S  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2646   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTCAGTAGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (232/242)  IGHV4-59*01  49   ....................................A..................G.........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_2646   91   TGGATTGGGTATATCTATTACAGTGGAACCACTAACTACAATCCCTCCCTCGAGAGTCGAGTCACCATATCTTTAGACACGTCCAAGAAC  180
V  95.9% (232/242)  IGHV4-59*01  139  ..........................G.G...C........C.........A...................AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  S  I  V  L  T  S  T  G  N 
                    Query_2646   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGCTCCATAGTGCTTACGAGTACGGGAAAT  270
V  95.9% (232/242)  IGHV4-59*01  229  ..............................................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  82.4% (14/17)    IGHD5-12*01  7    ------------------------------------------------------------------......GC.....T...-------  23

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2646   271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (46/46)   IGHJ5*02     6    ..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_259444

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD6-6*01                                                                                            14.1    9.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTC	ATTREQLVPIFDF	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	72	2	0	97.3
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	105	9	0	92.1
CDR3-IMGT (germline)	291	294	4	4	0	0	100
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  L  T  
                    Query_2647   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGCAAGGGCTCTGGATATAGCTTAACCA  93
V  93.1% (271/291)  IGHV5-51*01  2    ................................................................T.....T........C.....T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  V  P  G  K  G  L  E  W  I  G  I  I  Y  P  A  D  S  E  T  K  Y  
                    Query_2647   94   GTTATTGGATCGCCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATTGGGATCATCTATCCTGCTGACTCTGAAACCAAATACA  183
V  93.1% (271/291)  IGHV5-51*01  92   .C..C.......G.............A.........................G................G.........T....G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  S  S  S  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_2647   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCGGCCGACAAGTCCAGCAGCTCCGCCTTCTTGCAGTGGAGCAGCCTGAAGGCCTCGGACC  273
V  93.1% (271/291)  IGHV5-51*01  182  ...............................A.............T....A......A.C.............................A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      P  A  I  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2647   274  CCGCCATATATTATTGTGCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTCTGGGGGCAGGGAACCCTGGTCACCGTCTCCTCAG  363
V  93.1% (271/291)  IGHV5-51*01  272  .......G.....C.......---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -----------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------.......A......C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_234539

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           318     6e-89
IGHD3-22*01                                                                                           12.2    31   
IGHJ3*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TC	ATGATA	AACCTAGATCTTGTC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCATGATAAACCTAGATCTTGTCTTTGATATC	AKVMINLDLVFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  I  F  S  N  F  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2648   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCATCTTTAGCAACTTTGGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-23*01  47   ................................T...C........G..A..C.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  S  D  S  G  E  R  T  E  F  A  D  S  V  K  G  R  F  T  M  S  R  D  N  S  
                    Query_2648   91   AGTGGGTCGCGTTTATTAGTGATAGTGGTGAGCGCACAGAGTTCGCGGACTCCGTGAAGGGCCGGTTCACCATGTCCAGAGACAATTCCA  180
V  90.8% (226/249)  IGHV3-23*01  137  ........T.AGC........G........GTA.....T.C.A...A..........................C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      R  N  T  L  Y  L  Q  M  N  R  L  R  V  D  D  T  A  V  Y  Y  C  A  K  V  M  I  N  L  D  L  
                    Query_2648   181  GGAACACGCTGTATCTGCAAATGAACAGGCTGAGAGTCGACGACACGGCCGTATATTACTGTGCGAAAGTCATGATAAACCTAGATCTTG  270
V  90.8% (226/249)  IGHV3-23*01  227  A...........................C.......C...G............................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD3-22*01  9    -----------------------------------------------------------------------......-------------  14

                                      ---------->                                  
                                      V  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_2648   271  TCTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  315
J  97.7% (42/43)    IGHJ3*02     8    --........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_340404

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           411     5e-117
IGHD1-1*01                                                                                            10.3    135   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAACG	GGTAACCCCATATCGCGGC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTAT	ARGTGNPISRLGY	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	73	2	0	97.3
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	279	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  I  S  C  K  A  S  G  Y  T  F  T 
                    Query_2649   2    CAGGTGCAGCTGGTGCAGTCTGGGGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCATCTGGATACACCTTCACC  91
V  94.6% (279/295)  IGHV1-46*01  1    .........................C...............................G................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  T  G  G  T  N  Y 
                    Query_2649   92   AGCTATTATATGCACTGGGTACGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTACTGGTGGCACAAATTAC  181
V  94.6% (279/295)  IGHV1-46*01  91   .....C..............G...................................................GG....A......GC...  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  P  T  S  T  V  Y  L  D  L  S  S  L  E  S  E  D 
                    Query_2649   182  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGCCCACGAGCACAGTCTACTTGGACCTGAGCAGCCTTGAATCTGAGGAC  271
V  94.6% (279/295)  IGHV1-46*01  181  ..........................................T.................A....G...........GAG..........  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  Y  C  A  R  G  T  G  N  P  I  S  R  L  G  Y  W  G  Q  G  T  L  V  T  V  S  A 
                    Query_2649   272  ACGGCCGTTTATTACTGTGCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCA  361
V  94.6% (279/295)  IGHV1-46*01  271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD1-1*01   11   -------------------------.....------------------------------------------------------------  15
J  92.9% (39/42)    IGHJ4*02     7    -------------------------------------------------...A...C..............................T..  47

                                       
                                       
                    Query_2649   362  G  362
J  92.9% (39/42)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_77035

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            318     5e-89
IGHD6-19*01                                                                                           21.8    0.039
IGHJ5*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCAGTGGCTGG	CTAC	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCAGTGGCTGGCTACTCGACGTC	VRGSGWLLDV	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  N  T  K  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_2650   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATGTTTAATACTAAATGGATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTG  90
V  90.8% (226/249)  IGHV3-7*01   47   ....................................CC....G..GCT.T.......GC.............................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  H  N  A  
                    Query_2650   91   AGTGGGTGGCCATCATAAAGCAGGATGGAAGTGAAAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGACACAACGCCA  180
V  90.8% (226/249)  IGHV3-7*01   137  ............A.........A...........G.............................................G.........  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      N  N  S  V  F  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  V  R  G  S  G  W  L  L  D  
                    Query_2650   181  ATAATTCAGTGTTTCTGCAAATGAACTCCCTGACAGCCGAGGACACGGCTGTGTATTATTGTGTGAGAGGCAGTGGCTGGCTACTCGACG  270
V  90.8% (226/249)  IGHV3-7*01   227  .G..C...C...A.............AG.....G........................C....C.....---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-19*01  8    ---------------------------------------------------------------------...........----------  18
J  88.1% (37/42)    IGHJ5*02     10   ------------------------------------------------------------------------------------.....C  15

                                      ->                                  
                                      V  W  G  Q  G  A  M  V  I  V  S  S  
                    Query_2650   271  TCTGGGGCCAGGGAGCCATGGTCATCGTCTCCTCAG  306
J  88.1% (37/42)    IGHJ5*02     16   C.............A..C......C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_56386

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           347     7e-98
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGGG	TCGGGGGGTT	TTGATCCCA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGGGTCGGGGGGTTTTGATCCCAGACTAC	ARDRGRGVLIPDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  V  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  E  G  L  
                    Query_2651   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCGTCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCGAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-33*01  47   ...................................AC........G..................................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  H  I  L  Y  D  G  S  N  T  Y  Y  A  D  S  V  Q  G  R  F  I  I  S  R  D  N  S  
                    Query_2651   91   AGTGGGTGGCACATATATTGTATGATGGAAGTAACACATACTATGCAGACTCCGTGCAGGGCCGATTCATCATCTCCAGAGACAATTCCA  180
V  94.4% (236/250)  IGHV3-33*01  137  ...........GT.....G...............T.A...................A............C....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  G  R  G  V  L  
                    Query_2651   181  AGAACACGCTTTTTCTGCAAATGAACAGCCTGAGGGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATAGGGGTCGGGGGGTTTTGA  270
V  94.4% (236/250)  IGHV3-33*01  227  ..........G.A.....................A...................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-10*01  14   ----------------------------------------------------------------------------......A...----  23

                                      ---------->                                  
                                      I  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2651   271  TCCCAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (40/40)   IGHJ4*02     9    -----........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_56387

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           321     6e-90
IGHD3-10*01                                                                                           10.3    118  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_2652   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAGTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  91.5% (226/247)  IGHV3-21*01  47   ................................T...........AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  T  T  S  E  F  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_2652   91   AGTGGGTCTCATCCATTAGTACTACTAGTGAGTTCATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  91.5% (226/247)  IGHV3-21*01  137  .....................G..G....AGT.A......C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  S  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_2652   181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGCGCCGAGGACACGGCTCTCTATTACTGTGCGAGGGTCCGATCGGGCTATGATGCTT  270
V  91.5% (226/247)  IGHV3-21*01  227  ............A......A..............A...............G.G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2652   271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_56384

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           248     8e-68
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	ARGLLIEDPNYVWGSFRRNHNCYTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	92	22	0	80.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	201	43	0	82.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  R  L  E 
                    Query_2653   1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGAGACTGGAG  90
V  82.4% (201/244)  IGHV4-59*01  49   ..................A....C.......G.......A...G..........AG....A.C........C.......A.G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_2653   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  82.4% (201/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  N  Y 
                    Query_2653   181  CAGTTGTCTCTCAACCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCAACTAT  270
V  82.4% (201/244)  IGHV4-59*01  229  .....C..C..G..G....G.TCT.....................GT.....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_2653   271  GTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  94.7% (36/38)    IGHJ3*01     13   --------------------------------------...................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_56385

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           427     9e-122
IGHD2-21*02                                                                                           14.1    9.3   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGGGGGATG	GGTGGTAACT	CCGGCGTCT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGGGGGATGGGTGGTAACTCCGGCGTCTTAC	ARVGGWVVTPASY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  H  Y 
                    Query_2654   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCCACTAT  91
V  97.2% (281/289)  IGHV1-18*01  7    .................................................A..................................AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  R  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_2654   92   GGTATCAGCTGGGTGCGACGGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAG  181
V  97.2% (281/289)  IGHV1-18*01  97   ...................A......................................................................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_2654   182  AACCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGATGACACGGCC  271
V  97.2% (281/289)  IGHV1-18*01  187  ..G.............................................................................C.........  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------CDR3-IMGT-------------->                                  
                                       I  Y  Y  C  A  R  V  G  G  W  V  V  T  P  A  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2654   272  ATCTATTACTGTGCGAGAGTGGGGGGATGGGTGGTAACTCCGGCGTCTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  97.2% (281/289)  IGHV1-18*01  277  G.G................------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                    
D  90.0% (9/10)     IGHD2-21*02  11   -----------------------------......G...----------------------------------------------  20
J  100.0% (37/37)   IGHJ4*02     12   ------------------------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_56383

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           433     1e-123
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  A  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_2655   1    GCAGCTGGTGCAGTCTGGAGCAGAGGCGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  97.9% (283/289)  IGHV5-51*01  6    ..........................T..................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_2655   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  97.9% (283/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2655   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (283/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  P  V  S  S
                    Query_2655   271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTC  360
V  97.9% (283/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  97.9% (47/48)    IGHJ4*02     1    --------------------------------------------...................................A..........  46

                                        
                                        
                    Query_2655   361  AG  362
J  97.9% (47/48)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_56380

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD3-16*01                                                                                           43.0    2e-08 
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCTAGTCTGGAA	TATGATTACGTTTGGGGGAGTT	CTCACCTCAC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCTAGTCTGGAATATGATTACGTTTGGGGGAGTTCTCACCTCACCTGGTTCGACCCC	AREASLEYDYVWGSSHLTWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  S  I  S  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2656   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCTCCATCAGTAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ...................C.........................T............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  T  G  S  T  K  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2656   91   TGGATTGGGTATATGTATTACACTGGGAGCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAT  180
V  96.3% (236/245)  IGHV4-59*01  139  ..............C.......G............C................A....................................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  E  A  S  L  E  Y  D  Y  V 
                    Query_2656   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGAGCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAAGCTAGTCTGGAATATGATTACGTT  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............C............C....................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (22/22)   IGHD3-16*01  5    ------------------------------------------------------------------------------............  16

                                      -IMGT--------------------------->                                  
                                       W  G  S  S  H  L  T  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2656   271  TGGGGGAGTTCTCACCTCACCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  337
D  100.0% (22/22)   IGHD3-16*01  17   ..........---------------------------------------------------------  26
J  100.0% (47/47)   IGHJ5*02     5    --------------------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_104323

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            318     6e-89
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ5*01                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAGGGGG	AGCAGTGGCTGGTAC	ACGGGCCCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGGGGGAGCAGTGGCTGGTACACGGGCCCCTTCGACTCC	ARVRGSSGWYTGPFDS	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  A  G  S  I  T  S  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_2657   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGCTGGCTCCATCACTAGTAATAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.1% (225/247)  IGHV4-4*02   49   ............................G...........GC....G...C.......................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  A  N  Y  Q  P  S  L  W  S  R  V  T  I  S  L  D  R  S  K 
                    Query_2657   91   GAGTGGATTGGAGAAATCTATCATAGTGGGAGCGCCAACTATCAGCCGTCCCTCTGGAGCCGAGTCACCATATCACTAGACAGGTCCAAG  180
V  91.1% (225/247)  IGHV4-4*02   139  ...........G.....................A.......CA.C.........AA...T...............G......A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  Q  F  S  M  D  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  G  S  S  G  W  Y 
                    Query_2657   181  AACCAGTTCTCCATGGACTTGAACTCAGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGAGAGTAAGGGGGAGCAGTGGCTGGTAC  270
V  91.1% (225/247)  IGHV4-4*02   229  ............C..A.GC...G...T.......................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (15/15)   IGHD6-19*01  7    ---------------------------------------------------------------------------...............  21

                                      ----------------->                                  
                                       T  G  P  F  D  S  W  G  Q  G  I  L  D  T  V  S  S  
                    Query_2657   271  ACGGGCCCCTTCGACTCCTGGGGCCAGGGAATCCTGGACACCGTCTCGTCAG  322
J  90.7% (39/43)    IGHJ5*01     9    ---------.................A....C.....T.........C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_56388

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           333     1e-93
IGHD3-10*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTTGG	GGTTCGAGGAGTTAT	CAGGAAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGGGGTTCGAGGAGTTATCAGGAATCTACTACTACGGCATGGACGTC	ARLGFEELSGIYYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2658   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACTACCTATAGTATGAACTGGGTCCGGCAGGCTCCAGGTAAGGGCCTGG  90
V  93.1% (230/247)  IGHV3-21*01  47   ..........................................G..G......C..............C...........G.....G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  S  I  S  S  R  D  T  Y  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_2658   91   AGTGGCTCTCGTCCATTAGTAGTCGAGATACTTACATAAACTACGCAGACTCCGTAAAGGGCCGATTCACCATCTCCAGAGACAGCGCCA  180
V  93.1% (230/247)  IGHV3-21*01  137  .....G....A............A.TAG..G.......T.............A..G............................A.....  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  L  G  F  E  E  L  S  
                    Query_2658   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGTTGGGGTTCGAGGAGTTATCAG  270
V  93.1% (230/247)  IGHV3-21*01  227  ...................................................................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------------......G........---  25

                                      IMGT--------------------->                                 
                                      G  I  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2658   271  GAATCTACTACTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  98.2% (54/55)    IGHJ6*02     8    ----............T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_56389

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            410     1e-116
IGHD2-15*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACTTAGGGCGAGGGGTC	GTGGTGGTAGC	CCTACCTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAACTTAGGGCGAGGGGTCGTGGTGGTAGCCCTACCTGGTACTTTGACTAC	ARELRARGRGGSPTWYFDY	273	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	158	27	25	2	0	92.6
FR3-IMGT	159	272	114	110	4	0	96.5
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	280	271	9	0	96.8


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  Y  S  A  A  W  N  W  
                    Query_2659   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGCGACAGTGTCTCTAGCTACAGTGCTGCTTGGAACTGGA  90
V  96.8% (271/280)  IGHV6-1*01   26   ....................................................G...............A.....................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  S  R  S  K  W  Y  T  D  Y  A  V  S  V  K  
                    Query_2659   91   TCAGGCAGTCGCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTCCAGGTCCAAGTGGTATACTGATTATGCAGTCTCTGTGAAGA  180
V  96.8% (271/280)  IGHV6-1*01   116  ..........C.....................................A.................A............A........A.  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  M  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_2659   181  GTCGAATGACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  96.8% (271/280)  IGHV6-1*01   206  .......A..................................................................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-----------------------CDR3-IMGT----------------------->                               
                                      C  A  R  E  L  R  A  R  G  R  G  G  S  P  T  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_2659   271  GCGCAAGAGAACTTAGGGCGAGGGGTCGTGGTGGTAGCCCTACCTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  360
V  96.8% (271/280)  IGHV6-1*01   296  .T........--------------------------------------------------------------------------------  305
                                      C  A  R                                                                                   
D  100.0% (11/11)   IGHD2-15*01  12   ---------------------------...........----------------------------------------------------  22
J  100.0% (46/46)   IGHJ4*02     3    -----------------------------------------------...........................................  45

                                         
                                      S  
                    Query_2659   361  CAG  363
J  100.0% (46/46)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_234532

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGAAGGG	TTACCATTTTTGGAGTGGTT	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGAAGGGTTACCATTTTTGGAGTGGTTCTTTGAGTAC	AKDEGLPFLEWFFEY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  I  F  S  D  Y  A  T  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2660   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCATCTTTAGCGACTATGCCACGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-23*01  47   .....................C..............C.......AG........T...................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  T  I  G  G  T  D  G  D  T  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  S  
                    Query_2660   91   AGTGGGTCGCAACTATCGGTGGTACTGATGGTGACACATACTACGCAGACTCTGTGGAGGGTCGGTTCACCATCTCCAGAGACAATTCCA  180
V  90.8% (227/250)  IGHV3-23*01  137  ........T..G....TA......G..G....AG..................C...A....C............................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  M  D  D  T  A  V  Y  Y  C  A  K  D  E  G  L  P  F  L  
                    Query_2660   181  AGAACACACTCTATCTGCAAATGAACAGCCTGAGGATGGACGACACGGCCGTATATTACTGTGCGAAAGATGAAGGGTTACCATTTTTGG  270
V  90.8% (227/250)  IGHV3-23*01  227  .......G..G.......................AGCC..G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.0% (19/20)    IGHD3-3*01   4    -----------------------------------------------------------------------------....G........  16

                                      ---------------->                                  
                                      E  W  F  F  E  Y  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_2660   271  AGTGGTTCTTTGAGTACTGGGGCCAGGGAACCGTGGTCACCGTCTCCTCAG  321
D  95.0% (19/20)    IGHD3-3*01   17   .......--------------------------------------------  23
J  95.5% (42/44)    IGHJ4*02     5    -------......C..................C..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_77038

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           338     4e-95
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAA	TACGGTTTTTGGAGTGGTTA	ACCATGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCAATACGGTTTTTGGAGTGGTTAACCATGGCTAC	ASNTVFGVVNHGY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	229	13	0	94.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  Y  S  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  W  L  E 
                    Query_2661   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTACAGTGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGTGGCTGGAG  90
V  94.6% (229/242)  IGHV4-34*01  49   .....................................T.....G.....................................G........  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  Y  G  R  T  N  F  N  P  S  L  E  S  R  V  T  I  L  V  D  T  T  K  N 
                    Query_2661   91   TGGATTGGGGAAATCAATCATTATGGAAGAACCAACTTCAACCCGTCCCTCGAGAGTCGAGTCACCATATTAGTAGACACGACCAAGAAC  180
V  94.6% (229/242)  IGHV4-34*01  139  .....................AG......C.......A.............A..................C..........T........  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  T  V  Y  Y  C  A  S  N  T  V  F  G  V  V  N  H 
                    Query_2661   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGACTGTGTATTACTGTGCGAGCAATACGGTTTTTGGAGTGGTTAACCAT  270
V  94.6% (229/242)  IGHV4-34*01  229  .............A.....G......................G...................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.0% (19/20)    IGHD3-3*01   5    -----------------------------------------------------------------....A...............-----  24

                                      ----->                                  
                                       G  Y  W  G  Q  G  T  L  V  T  A  S  S  
                    Query_2661   271  GGCTACTGGGGCCAGGGAACCCTGGTCACCGCCTCCTCAG  310
J  97.4% (37/38)    IGHJ4*02     11   --.............................T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_234530

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	CCCCCT	TAGGAGCACCTGGTAC	CTACCCCGGGAGGGTCT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGACCCCCTTAGGAGCACCTGGTACCTACCCCGGGAGGGTCTCC	VTPLGAPGTYPGRVS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	235	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  N  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2662   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCAATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.5% (235/246)  IGHV3-23*01  47   .............................................G.T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  F  S  G  S  G  G  D  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_2662   91   AGTGGGTCTCACTTTTTAGTGGTAGTGGTGGTGACACATACTACGCAGACTCCGTGAGGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.5% (235/246)  IGHV3-23*01  137  ...........GC.A.................AG.......................A................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  T  P  L  G  A  P  G  T  
                    Query_2662   181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGTGACCCCCTTAGGAGCACCTGGTACCT  270
V  95.5% (235/246)  IGHV3-23*01  227  ..............C.....................................A..........C..------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  87.5% (14/16)    IGHD6-13*01  6    ------------------------------------------------------------------------...C....G.......--  21

                                      ---------------->                                  
                                      Y  P  G  R  V  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2662   271  ACCCCGGGAGGGTCTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (36/36)   IGHJ5*02     16   ---------------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_292231

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         347     7e-98
IGHD5-12*01                                                                                           14.1    8.5  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	CGGTAAAGA	TGGCGACAATTAC	TTTTCCTCATTGGGCT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGACGGTAAAGATGGCGACAATTACTTTTCCTCATTGGGCTCC	ATDGKDGDNYFSSLGS	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  V  A  S  G  I  T  F  S  T  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2663     1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGAATCACCTTCAGTACCTATTCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-30-3*01  47   .....................C..........T............G....G.......................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  D  I  S  F  D  G  G  K  K  H  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2663     91   AGTGGGTGGCAGATATATCATTTGATGGAGGCAAGAAGCACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (236/250)  IGHV3-30-3*01  137  ............T........A.......A....T..AT...A...............................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  T  D  G  K  D  G  D  N  
                    Query_2663     181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTTGAGGACACGGCTGTTTATTACTGTGCGACAGACGGTAAAGATGGCGACAATT  270
V  94.4% (236/250)  IGHV3-30-3*01  227  ....................................C...............G.............G...--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.6% (11/13)    IGHD5-12*01    11   -------------------------------------------------------------------------------....T..G...  21

                                        T------------------>                                  
                                        Y  F  S  S  L  G  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2663     271  ACTTTTCCTCATTGGGCTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  84.6% (11/13)    IGHD5-12*01    22   ..----------------------------------------------------  23
J  100.0% (36/36)   IGHJ5*02       16   ------------------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_292230

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           417     6e-119
IGHD3-3*01                                                                                            33.4    2e-05 
IGHJ5*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTACCCGACGAGGCGG	TTTTTGGAGTGGTTATT	CCCC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTACCCGACGAGGCGGTTTTTGGAGTGGTTATTCCCCCAACTGGTTCGACCCC	ARVTRRGGFWSGYSPNWFDP	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  T  F  T  S  Y 
                    Query_2664   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACTTCTGGTTACACCTTTACCAGTTAT  91
V  96.2% (278/289)  IGHV1-18*01  7    ...............................................................G......................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_2664   92   GGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGTTGGGATGGATCAGCGGTTACAATGGTAATACAAACTATGCACAG  181
V  96.2% (278/289)  IGHV1-18*01  97   .......G.....................................A...............C............C...............  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  V  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  A  E  T  A 
                    Query_2664   182  AGGGTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGCCGAGACGGCC  271
V  96.2% (278/289)  IGHV1-18*01  187  .A.C...........................................................................A...C......  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------CDR3-IMGT------------------------>                  
                                       V  Y  Y  C  A  R  V  T  R  R  G  G  F  W  S  G  Y  S  P  N  W  F  D  P  W  G  Q  G  T  L 
                    Query_2664   272  GTTTATTACTGTGCGAGAGTTACCCGACGAGGCGGTTTTTGGAGTGGTTATTCCCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTG  361
V  96.2% (278/289)  IGHV1-18*01  277  ..G................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (17/17)   IGHD3-3*01   10   -----------------------------------.................--------------------------------------  26
J  98.0% (49/50)    IGHJ5*02     2    --------------------------------------------------------..................................  35

                                                      
                                       V  T  V  S  S  
                    Query_2664   362  GTCACCGTCTCTTCAG  377
J  98.0% (49/50)    IGHJ5*02     36   ...........C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_292233

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           380     1e-107
IGHD3-3*01                                                                                            27.6    8e-04 
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGACC	TACGATTTTTGGAG	GGACC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGACCTACGATTTTTGGAGGGACCACTACTACGCTATGGACGTC	ARVTYDFWRDHYYAMDV	267	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	27	3	0	90
FR2-IMGT	81	131	51	49	2	0	96.1
CDR2-IMGT	132	152	21	19	2	0	90.5
FR3-IMGT	153	266	114	108	6	0	94.7
CDR3-IMGT (germline)	267	271	5	5	0	0	100
Total	N/A	N/A	271	257	14	0	94.8


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  A  S  I  T  T  S  S  Y  Y  W  G  W  
                    Query_2665   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACCACTAGTAGTTACTACTGGGGCTGGA  90
V  94.8% (257/271)  IGHV4-39*01  26   ................T.....................................G........G..G.......................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  T  V  Y  Y  I  G  S  T  Y  Y  N  P  S  L  R  S  R  
                    Query_2665   91   TCCGCCAGCCCCCAGGGAAGGGGCTGGAATGGATTGGGACTGTCTATTATATTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAG  180
V  94.8% (257/271)  IGHV4-39*01  116  ............................G..........G.A.........G.............................A........  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  R  L  S  S  L  T  A  A  D  T  A  V  Y  H  C  A  
                    Query_2665   181  TCACCATATCCGTGGACACGTCCAAGAACCAGTTCTCCCTGAGGCTGAGCTCTTTGACCGCCGCAGACACGGCTGTCTATCACTGTGCGA  270
V  94.8% (257/271)  IGHV4-39*01  206  .............A............................A..........G......................G...T.........  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      -----------------CDR3-IMGT-------------------->                                 
                                      R  V  T  Y  D  F  W  R  D  H  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_2665   271  GGGTGACCTACGATTTTTGGAGGGACCACTACTACGCTATGGACGTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  350
V  94.8% (257/271)  IGHV4-39*01  296  .-------------------------------------------------------------------------------  296
                                                                                                                      
D  100.0% (14/14)   IGHD3-3*01   5    --------..............----------------------------------------------------------  18
J  94.3% (50/53)    IGHJ6*02     10   ---------------------------.........G..................A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_292235

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           419     2e-119
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	CCTTGAACATCCA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCTTGAACATCCATGATGCTTTTGATATC	ARALNIHDAFDI	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  T  Y
                    Query_2666   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGTAAGGCTTCTGGAGGCACCTTCAGCACCTA  90
V  96.2% (279/290)  IGHV1-69*06  6    ..................G.........................................C.........................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  L  N  Y  A  Q
                    Query_2666   91   TGCTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATATTTGGTACACTAAACTACGCACA  180
V  96.2% (279/290)  IGHV1-69*06  96   ........G.........................................................C.........GC............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  I  T  I  T  A  D  K  S  T  S  T  A  H  M  E  L  S  S  L  K  S  D  D  T  A
                    Query_2666   181  GAAGTTCCAGGGCAGAATCACGATTACCGCGGACAAATCCACGAGCACAGCCCACATGGAGCTGAGCAGCCTGAAATCTGATGACACGGC  270
V  96.2% (279/290)  IGHV1-69*06  186  ................G...................................T.....................G......G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  R  A  L  N  I  H  D  A  F  D  I  W  G  Q  G  T  M  V  T  L  S  S  
                    Query_2666   271  CGTGTATTACTGTGCGAGAGCCTTGAACATCCATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCCTCTCTTCAG  353
V  96.2% (279/290)  IGHV1-69*06  276  ....................---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
J  98.0% (49/50)    IGHJ3*02     1    ---------------------------------........................................G.........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_292234

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         294     6e-82
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	GGAGTCGTAATTAT	CATGGGAATTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGAGTCGTAATTATCATGGGAATTTCTACTTCGACCAC	ARGSRNYHGNFYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  P  L  T  C  A  V  S  G  G  S  I  D  S  V  Y  Y  S  L  N  W  I  R  Q  T  P  L  K  G 
                    Query_2667     1    ACCCTGCCCCTCACCTGCGCTGTGTCTGGTGGCTCCATCGACAGTGTTTACTACTCCTTAAACTGGATCCGGCAGACACCACTGAAGGGC  90
V  87.6% (219/250)  IGHV4-30-2*01  49   ......T................C...............AG.....G.GGT.......GG.G.............C.....GG.......  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Q  H  S  G  A  T  Y  Y  N  P  S  L  E  S  R  V  S  L  S  V  D  R  S 
                    Query_2667     91   CTGGAGTGGATTGGCTACATCCAGCATTCTGGGGCCACCTACTACAACCCGTCCCTCGAGAGTCGGGTCTCCCTTTCAGTAGACCGGTCC  180
V  87.6% (219/250)  IGHV4-30-2*01  139  ..............G......T.T...AG....AG......................A.......A...A..A.A.........A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  S  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  R  N  Y  H  G 
                    Query_2667     181  AAGAGCCAGTTCTCCCTGAGGCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGAGGGAGTCGTAATTATCATGGG  270
V  87.6% (219/250)  IGHV4-30-2*01  229  ....A..............A.....G...........................G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  85.7% (12/14)    IGHD3-3*01     15   ----------------------------------------------------------------------.....G..T.....------  28

                                        ----------------->                                  
                                         N  F  Y  F  D  H  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_2667     271  AATTTCTACTTCGACCACTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTCAG  322
J  91.5% (43/47)    IGHJ4*02       2    -----......T...T...............C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_292237

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           286     1e-79
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	214	31	0	87.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  C  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_2668   1    ACCCTGTCCCTCACCTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTGCTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  87.3% (214/245)  IGHV4-34*01  49   .......................CTA..G..G......C..........A......C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  M  S  V  D  A  S  K  K 
                    Query_2668   91   TGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACGCGTCCAAGAAA  180
V  87.3% (214/245)  IGHV4-34*01  139  ................A............CA.C.AC......C..T......A...............A.........A..........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W 
                    Query_2668   181  CAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCTGGCGAAGACAGCGCAACTGG  270
V  87.3% (214/245)  IGHV4-34*01  229  ..GT...........C..A......T.....................G.....C......A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (49/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------.......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2668   271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (49/50)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_292236

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           396     2e-112
IGHD1-26*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGACA	TGGCGGAGGTAC	TGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGACATGGCGGAGGTACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	GGHGGGTGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	6	2	0	75
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_2669   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCCACTTA  90
V  93.5% (272/291)  IGHV5-51*01  6    ..................................................................................A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  P
                    Query_2669   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  93.5% (272/291)  IGHV5-51*01  96   C.......G.................................................T.................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  G  A  P  G  P  P
                    Query_2669   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGGGGGCCCCGGGCCCCCC  270
V  93.5% (272/291)  IGHV5-51*01  186  .......C.....................C...........................................AA....T...A.A..G.  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  F  C  G  G  H  G  G  G  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_2669   271  CATCTATTTCTGTGGGGGACATGGCGGAGGTACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  93.5% (272/291)  IGHV5-51*01  276  ...G....A.....C.A....---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  90.0% (9/10)     IGHD1-26*01  8    ---------------------------------....A.....-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------......TA....................................  49

                                                   
                                        T  V  S  S 
                    Query_2669   361  CACCGTCTCGTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_292238

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD3-16*01                                                                                           10.3    115   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGAAAGA	GGGGG	CTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC	ARDQKEGAPDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	241	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2670   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (241/245)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2670   91   TGGATTGGGTATATCTTTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (241/245)  IGHV4-59*01  139  ................A.........................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  K  E  G  A  P  D  Y 
                    Query_2670   181  CAATTCTCCCTGAAACTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC  270
V  98.4% (241/245)  IGHV4-59*01  229  ..G...........G..................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   --------------------------------------------------------------------------.....-----------  22
J  100.0% (41/41)   IGHJ4*02     8    -----------------------------------------------------------------------------------.......  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2670   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (41/41)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_48165

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           346     2e-97
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATGG	GGTTCGAGGA	CACTCGACCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTTCGAGGACACTCGACCGTTTTTGATATC	ARDGVRGHSTVFDI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  N  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2671   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTAACTCTTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (232/243)  IGHV4-59*08  49   ........................................G....T...AC.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_2671   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTATAATCCCTCCCTTAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  95.5% (232/243)  IGHV4-59*08  139  ......................................C..C........C.....................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  V  R  G  H  S  T  V 
                    Query_2671   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGATGGGGTTCGAGGACACTCGACCGTT  270
V  95.5% (232/243)  IGHV4-59*08  229  ....................C........C.......................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD3-10*01  11   --------------------------------------------------------------------......G...------------  20
J  93.2% (41/44)    IGHJ3*02     7    -----------------------------------------------------------------------------------------.  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  T  I  I  V  S  S  
                    Query_2671   271  TTTGATATCTGGGGCCAAGGGACAACGATCATCGTCTCTTCAG  313
J  93.2% (41/44)    IGHJ3*02     8    .........................T.G...C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_48164

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           353     9e-100
IGHD2-2*01                                                                                            12.2    32    
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTATGGACT	GTACCA	TTGCCCCCTGCCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTATGGACTGTACCATTGCCCCCTGCCGTTTTGACTTC	ASLMDCTIAPCRFDF	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  N  S  R  N  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_2672   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAACAGTCGTAATTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.6% (237/248)  IGHV4-39*01  49   ..................A.....................G....A...G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  N  Y  S  G  T  T  Y  Y  T  A  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_2672   91   CTGGAGTGGATTGGGAGTATCAATTATAGTGGGACCACCTACTACACCGCGTCCCTCAAGAGCCGAGTCACCATGTCCGTAGACACGTCC  180
V  95.6% (237/248)  IGHV4-39*01  139  .....................T............G...........A.C.............T...........A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  M  D  C  T  I  A 
                    Query_2672   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGCCTTATGGACTGTACCATTGCC  270
V  95.6% (237/248)  IGHV4-39*01  229  ...........................................................C........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (6/6)     IGHD2-2*01   15   -------------------------------------------------------------------------------......-----  20

                                      ----------------->                                 
                                       P  C  R  F  D  F  W  G  Q  G  T  L  A  T  V  S  S 
                    Query_2672   271  CCCTGCCGTTTTGACTTCTGGGGCCAGGGAACCCTGGCTACCGTCTCCTCA  321
J  92.9% (39/42)    IGHJ4*02     6    ---------.......A....................TC............  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_48167

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           403     1e-114
IGHD1-26*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GAGTTCCCCCAGC	GGGAGCTACT	CC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGACAGGAGTTCCCCCAGCGGGAGCTACTCCCTACTACGGTATGGATGTC	TTGVPPAGATPYYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	5	2	0	71.4
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  R  F
                    Query_2673   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGATT  90
V  94.5% (274/290)  IGHV1-69*01  6    ..................G....................................................................C.A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  I  P  I  F  G  T  A  N  Y  A  Q
                    Query_2673   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGCATCATCCCTATCTTTGGTACCGCAAACTACGCACA  180
V  94.5% (274/290)  IGHV1-69*01  96   ....................................................G.G....................A..............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  L  T  A  V  E  S  T  S  T  A  Y  M  E  L  S  S  L  K  S  E  D  T  A
                    Query_2673   181  GAGGTTCCAGGGCAGAGTCACACTTACCGCGGTCGAGTCCACGAGCACAGCCTACATGGAACTGAGCAGCCTGAAATCTGAGGACACGGC  270
V  94.5% (274/290)  IGHV1-69*01  186  ..A..................GA.........A...A.......................G.............G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  F  Y  C  T  T  G  V  P  P  A  G  A  T  P  Y  Y  G  M  D  V  W  G  Q  G  T  A  V  T  V
                    Query_2673   271  CGTGTTTTACTGTACGACAGGAGTTCCCCCAGCGGGAGCTACTCCCTACTACGGTATGGATGTCTGGGGCCAAGGGACCGCGGTCACCGT  360
V  94.5% (274/290)  IGHV1-69*01  276  .....A.......G...G..----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD1-26*01  9    ---------------------------------..........-----------------------------------------------  18
J  96.2% (50/52)    IGHJ6*02     11   ---------------------------------------------...............C..................A..........  55

                                             
                                        S  S 
                    Query_2673   361  CTCCTCA  367
J  96.2% (50/52)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_48161

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           369     2e-104
IGHD2-8*01                                                                                            12.2    31    
IGHJ1*01                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD2-8*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	ATGG	GGTGTA	N/A	TTCCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGAATGGGGTGTATTCCAGTAT	TTEWGVFQY	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	246	10	0	96.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  V  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2674   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACGTCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  96.1% (246/256)  IGHV3-15*01  47   .......T....................................A...C....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  P  D  Y  A  A  P  V  K  G  R  F  T  F  S  R  D  
                    Query_2674   91   AGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACACCAGACTACGCTGCACCCGTGAAAGGCAGATTCACCTTCTCAAGGGATG  180
V  96.1% (246/256)  IGHV3-15*01  137  .........................................A...................................A.......A....  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  E  W  G  V  F  
                    Query_2674   181  ACTCAAAAAACACACTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTATTGTACCACAGAATGGGGTGTATTCC  270
V  96.1% (246/256)  IGHV3-15*01  227  .T...........G..................................................C...........--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (6/6)     IGHD2-8*01   17   --------------------------------------------------------------------------------......----  22
J  93.0% (40/43)    IGHJ1*01     10   --------------------------------------------------------------------------------------....  13

                                      ---->                                  
                                      Q  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2674   271  AGTATTGGGGCCAGGGCACTCTGGTCACCGTCTCCTCAG  309
J  93.0% (40/43)    IGHJ1*01     14   ..C.C..............C...................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_48160

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     8e-92
IGHD1-26*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCACTGC	GAGCTACT	CT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGCACTGCGAGCTACTCTTTTGACTAC	ARDRTASYSFDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  N  Y  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2675   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAATTATTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   .................................T......G.AG............C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  F  Y  N  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  T  N  N 
                    Query_2675   91   TGGATTGGATATGTCTTTTACAATGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGTTAGACACGACCAACAAC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G...A...A.....G.....G..........................................AG........T....G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  N  S  V  T  T  A  D  T  A  V  Y  Y  C  A  R  D  R  T  A  S  Y  S  F  D 
                    Query_2675   181  CAGTTCTCCCTAAAACTGAACTCTGTGACCACTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGCACTGCGAGCTACTCTTTTGAC  270
V  92.7% (227/245)  IGHV4-59*01  229  ...........G..G....G..........G..................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD1-26*01  11   --------------------------------------------------------------------------........--------  18
J  100.0% (43/43)   IGHJ4*02     6    ------------------------------------------------------------------------------------......  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2675   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (43/43)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_274299

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           266     2e-73
IGHD3-9*01                                                                                            18.0    0.55 
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	AGCATATACCTAT	TATTTTGATTGG	N/A	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGAAGCATATACCTATTATTTTGATTGG	AKEAYTYYFDW	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	22	24	3	3	0	0	100
CDR1-IMGT	25	48	24	20	4	0	83.3
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	16	8	0	66.7
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	224	197	27	0	87.9


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  A  F  S  H  F  G  M  H  W  V  R  Q  V  P  G  K  G  L  E  W  V  A  V  I  S  H  D 
                    Query_2676   22   TCTGGATTCGCCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGTCCCAGGCAAGGGCCTGGAGTGGGTGGCAGTTATTTCACATGAT  111
V  87.9% (197/224)  IGHV3-30*18  73   .........A........AG..A.......................CT...........G....................A...T.....  162
                                       S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       E  A  I  I  Y  Y  G  D  S  V  R  G  R  F  T  I  S  R  D  N  S  K  N  I  L  Y  L  Q  M  N 
                    Query_2676   112  GAAGCTATCATATACTATGGCGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACATCTTGTATCTGCAGATGAAT  201
V  87.9% (197/224)  IGHV3-30*18  163  .G.AG..AT.A........CA..........A......................................CGC..........A.....C  252
                                       G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><-----------CDR3-IMGT----------->                     
                                       G  L  R  T  E  D  T  A  M  Y  Y  C  A  K  E  A  Y  T  Y  Y  F  D  W  W  G  Q  G  T  Q  V 
                    Query_2676   202  GGCCTGAGAACTGAGGACACGGCTATGTATTACTGTGCGAAGGAAGCATATACCTATTATTTTGATTGGTGGGGCCAGGGAACCCAGGTC  291
V  87.9% (197/224)  IGHV3-30*18  253  A........G..............G................A..----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  91.7% (11/12)    IGHD3-9*01   10   ---------------------------------------------------------........C...---------------------  21
J  97.1% (33/34)    IGHJ4*02     15   ---------------------------------------------------------------------................T....  35

                                                   
                                       T  V  S  S  
                    Query_2676   292  ACCGTCTCCTCAG  304
J  97.1% (33/34)    IGHJ4*02     36   .............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_274298

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           433     1e-123
IGHD5-18*01                                                                                           16.1    2.6   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTTCCCAACCGAAATGTCAAAAC	GTGGATAC	CTGCGCCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTCCCAACCGAAATGTCAAAACGTGGATACCTGCGCCCTCTAC	ARLSQPKCQNVDTCALY	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	74	0	0	100
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	285	8	0	97.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_2677   3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCA  92
V  97.3% (285/293)  IGHV5-51*03  2    ..................................................................................C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  F  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_2677   93   ACTTCTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  182
V  97.3% (285/293)  IGHV5-51*03  92   G..A......................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  T  S  L  K  A  S  D  
                    Query_2677   183  GGCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGACCAGCCTGAAGGCCTCGGACA  272
V  97.3% (285/293)  IGHV5-51*03  182  .C..............................................................G....G....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  I  Y  Y  C  A  R  L  S  Q  P  K  C  Q  N  V  D  T  C  A  L  Y  W  G  Q  G  T  L  V  
                    Query_2677   273  CCGCCATTTATTATTGTGCGAGACTTTCCCAACCGAAATGTCAAAACGTGGATACCTGCGCCCTCTACTGGGGCCAGGGAACCCTGGTCA  362
V  97.3% (285/293)  IGHV5-51*03  272  .......G.....C.........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD5-18*01  1    -----------------------------------------------........-----------------------------------  8
J  97.4% (37/38)    IGHJ4*02     11   ----------------------------------------------------------------..........................  36

                                                  
                                      T  V  S  A  
                    Query_2677   363  CCGTCTCCGCAG  374
J  97.4% (37/38)    IGHJ4*02     37   ........T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_274297

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           308     4e-86
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ATTTCT	TATGGTTCGGGGAGT	CACGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAATTTCTTATGGTTCGGGGAGTCACGGGTGGTTCGACCCC	ARISYGSGSHGWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	220	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  D  S  I  S  K  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2678   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGACTCCATCAGCAAATACTTCTGGAGTTGGATCCGTCAGCCCCCCGGGAAGGGCCTGGAG  90
V  90.5% (220/243)  IGHV4-59*01  49   ...................C...........G.........T.GT....A......C........G........A........A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  I  G  T  T  S  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2678   91   TGGATTGGTTACATCTATTACATTGGGACCACCAGCTACAACCCCTCCCTCGAGAGTCGCGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  90.5% (220/243)  IGHV4-59*01  139  ........G..T..........G.....G.....A................A.......A..............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  R  A  M  Y  Y  C  A  R  I  S  Y  G  S  G  S  H  G 
                    Query_2678   181  CAGTTCTCCCTGAAGCTAACGTCTGTGACCGCTGCGGACAGGGCCATGTATTACTGTGCGCGAATTTCTTATGGTTCGGGGAGTCACGGG  270
V  90.5% (220/243)  IGHV4-59*01  229  .................G.GC...................C....G..............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (15/15)   IGHD3-10*01  8    ---------------------------------------------------------------------...............------  22

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2678   271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (46/46)   IGHJ5*02     6    ..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_274295

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_2679  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01  49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_2679  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01  139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_2679  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01  229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01  13   ----------------------------------------------------------------------.....C..G...--------  24

                                     ----------->                                  
                                      G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_2679  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02    6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_274294

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           360     1e-101
IGHD2-2*01                                                                                            14.1    8.1   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	GACTAA	CAGCTGC	CA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGACAGACTAACAGCTGCCATGACTAC	ARQTNSCHDY	249	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	243	13	0	94.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  D  P  A  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_2680   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCATCTTCAGTGACCCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  94.9% (243/256)  IGHV3-73*01  47   .........A..........................C........G.T..........................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  H  I  R  S  E  A  R  S  Y  E  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_2680   91   AGTGGGTTGGCCATATTAGAAGCGAAGCTAGAAGTTACGAGACAGCATATGCTGCGTCGGTGAAGGGCAGGTTCACCATCTCCAGAGATG  180
V  94.9% (243/256)  IGHV3-73*01  137  ............G..........A......AC.......C........................A.........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--
                                      D  S  K  N  T  V  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  Q  T  N  S  C  
                    Query_2680   181  ATTCAAAGAACACGGTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTATTGTGCTAGACAGACTAACAGCTGCC  270
V  94.9% (243/256)  IGHV3-73*01  227  ...............C................................................C...A.......--------------  302
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (7/7)     IGHD2-2*01   19   ----------------------------------------------------------------------------------.......-  25

                                      ------->                                  
                                      H  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_2680   271  ATGACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  312
J  97.6% (40/41)    IGHJ4*02     8    -.......................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_48169

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2681   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_2681   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_2681   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_2681   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_14060

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           279     3e-77
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	216	28	6	86.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_2682   4    CCCTGAGACTCTCCTGTGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.4% (216/250)  IGHV4-34*01  50   .....TCC...A....C.....C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_2682   94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.4% (216/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_2682   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.4% (216/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_2682   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_274291

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           389     2e-110
IGHD2-2*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TG	GTAGTAGT	GACTACTTTTCTTACCGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGGTAGTAGTGACTACTTTTCTTACCGATTTGACTCC	ASGSSDYFSYRFDS	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	19	5	0	79.2
FR3-IMGT	175	288	114	105	9	0	92.1
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	293	271	22	0	92.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  D  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_2683   1    CAGGTTCAGCTGGTGCAGTCTGGGGCTGACGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGGCACCTTCAGC  90
V  92.5% (271/293)  IGHV1-69*06  1    .....G.......................G.........................................T..................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  K  S  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  L  I  P  L  F  G  T  P  N  Y 
                    Query_2683   91   AGCAAGTCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGGGACTCATCCCTCTCTTTGGAACACCTAACTAC  180
V  92.5% (271/293)  IGHV1-69*06  91   ...T.TG.................................................A..GA........A.......T...G.A......  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  R  D  R  V  T  I  T  A  D  K  S  T  S  T  H  Y  M  E  L  S  S  L  R  S  D  D 
                    Query_2683   181  GCACAGAAGTTCCGGGACAGAGTCACTATTACTGCGGACAAATCCACGAGCACACACTACATGGAGTTGAGCAGCCTGAGATCTGATGAC  270
V  92.5% (271/293)  IGHV1-69*06  181  .............A..G.........G.....C.....................GC..........C...................G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  F  C  A  S  G  S  S  D  Y  F  S  Y  R  F  D  S  W  G  Q  G  T  L  V  T  V  S 
                    Query_2683   271  ACGGCCGTGTATTTCTGTGCGAGTGGTAGTAGTGACTACTTTTCTTACCGATTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCC  360
V  92.5% (271/293)  IGHV1-69*06  271  .............A.........-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (8/8)     IGHD2-2*01   9    -------------------------........---------------------------------------------------------  16
J  97.7% (42/43)    IGHJ4*02     6    ---------------------------------------------------.......A...............................  44

                                          
                                       S  
                    Query_2683   361  TCAG  364
J  97.7% (42/43)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_274290

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           382     4e-108
IGHD2-15*01                                                                                           10.3    126   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCTAGAAATCCAGTTCGCCGGACTATC	ACTCC	ACGGTCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCTAGAAATCCAGTTCGCCGGACTATCACTCCACGGTCATTTTGACTAC	ARALEIQFAGLSLHGHFDY	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2684   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (247/250)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2684   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (247/250)  IGHV4-31*03  139  ..........................................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  A  L  E  I  Q  F  A 
                    Query_2684   181  AAGAACCAATTCTCCCTGAAACTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGCCCTAGAAATCCAGTTCGCC  270
V  98.8% (247/250)  IGHV4-31*03  229  ........G...........G.....................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       G  L  S  L  H  G  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2684   271  GGACTATCACTCCACGGTCATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  100.0% (5/5)     IGHD2-15*01  27   --------.....---------------------------------------------------  31
J  100.0% (43/43)   IGHJ4*02     6    ---------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_154936

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           347     7e-98
IGHD2-15*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGG	GGATATTGTAGTGGTG	CTCCCTGCTCCCCGAGCC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATGGGGGATATTGTAGTGGTGCTCCCTGCTCCCCGAGCCACTTCGACTAC	VKDGGYCSGAPCSPSHFDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  G  S  A  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_2685   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAGTGGAAGTGCTATGTACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  94.4% (236/250)  IGHV3-64*05  47   ............................................A.CTA.......C.................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  V  S  A  V  S  G  D  G  G  G  T  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2685   91   AATGTGTTTCAGCTGTTAGTGGTGATGGGGGTGGCACAAAGTACGCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (236/250)  IGHV3-64*05  137  ...A..........A.....A..A........A.....T.C.................................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  F  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K  D  G  G  Y  C  S  G  
                    Query_2685   181  AGAACACGCTGTTTCTTCAAATGAGCAGTCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGTGAAAGATGGGGGATATTGTAGTGGTG  270
V  94.4% (236/250)  IGHV3-64*05  227  ............A.G.......................................................--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (16/16)   IGHD2-15*01  2    --------------------------------------------------------------------------................  17

                                      -IMGT----------------------->                                
                                      A  P  C  S  P  S  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2685   271  CTCCCTGCTCCCCGAGCCACTTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  331
J  97.7% (42/43)    IGHJ4*02     4    ------------------....T......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_104325

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           361     4e-102
IGHD4-17*01                                                                                           14.1    8.4   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGGAGGAA	GACTGCGGTG	CCCCCGACCGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGGAGGAAGACTGCGGTGCCCCCGACCGATTTGACTAC	AKGEEDCGAPDRFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_2686   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  96.4% (240/249)  IGHV3-23*01  47   .........................................................G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  G  A  G  T  Y  Y  T  D  S  V  K  G  R  F  A  I  S  R  D  N  S  
                    Query_2686   91   AGTGGGTCTCAACTATCAGTGGTAGTGGTGCTGGCACATACTACACAGACTCCGTGAAGGGCCGGTTCGCCATCTCCAGAGACAATTCCA  180
V  96.4% (240/249)  IGHV3-23*01  137  ...........G....T.............G.A...........G.......................A.....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  E  E  D  C  G  A  
                    Query_2686   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGGGGAGGAAGACTGCGGTGCCC  270
V  96.4% (240/249)  IGHV3-23*01  227  ........C............................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (9/10)     IGHD4-17*01  2    -----------------------------------------------------------------------------....A.....---  11

                                      ---------------->                                  
                                      P  D  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2686   271  CCGACCGATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (43/43)   IGHJ4*02     6    --------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_238279

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	AGTGGC	TACTATGACACTAGTGGT	GACATTCC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGTGGCTACTATGACACTAGTGGTGACATTCCCAACTGGTTCGACCCC	SGYYDTSGDIPNWFDP	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  R  R  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_2687   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCCGTCGTAATTACTATTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  94.7% (230/243)  IGHV4-61*01  49   ..........................................A..G...G......C.....C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_2687   91   CTGGAGTGGATTGGATATATCTATTACCGTGGGACCACCAACTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCC  180
V  94.7% (230/243)  IGHV4-61*01  139  ..............G............A......G............C..............................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  T  Y  Y  C  S  G  Y  Y  D  T  S  G  D 
                    Query_2687   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCACTTATTACTGTAGTGGCTACTATGACACTAGTGGTGAC  270
V  94.7% (230/243)  IGHV4-61*01  229  ...................................................GTG.........---------------------------  291
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  88.9% (16/18)    IGHD3-22*01  5    ---------------------------------------------------------------------........T.G.......---  22

                                      GT------------------>                                  
                                       I  P  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2687   271  ATTCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (50/50)   IGHJ5*02     2    -----..................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_238278

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           397     7e-113
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCCCTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTTCTACGATCTGGACGTC	ASPPFYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	271	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_2688   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  94.1% (271/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_2688   91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  94.1% (271/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_2688   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTAAAGGCCTCGGACACCGC  270
V  94.1% (271/288)  IGHV5-51*01  186  ...............G.........................T.........................A....G.................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  C  W  A  S  P  P  F  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2688   271  CATATACTGCTGGGCGAGTCCTCCCTTCTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  94.1% (271/288)  IGHV5-51*01  276  ...G..T.A...T.....----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  93.9% (46/49)    IGHJ6*02     14   ---------------------------.....G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_238270

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           344     6e-97
IGHD2-21*01                                                                                           10.3    122  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TGTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTGTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFVQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  I  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  N 
                    Query_2689   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCATCATCAGGAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGAAC  90
V  94.4% (234/248)  IGHV4-31*03  49   ...............................G.TC......C....................C........................GG.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2689   91   CTGGAGTGGATTGGGTACATCTATTATAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCT  180
V  94.4% (234/248)  IGHV4-31*03  139  ..........................C.......G.............C......................C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  V  Q  E 
                    Query_2689   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGGTCTTCTCTATTTGTCCAAGAA  270
V  94.4% (234/248)  IGHV4-31*03  229  ..........................C.............................T...........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD2-21*01  22   ---------------------------------------------------------------------------.....----------  26

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2689   271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_238273

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           375     3e-106
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCAGTTGGCCCATTC	TGGTTCGGGGAGT	CCCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGTTGGCCCATTCTGGTTCGGGGAGTCCCTCTTGACTAC	ARGSWPILVRGVPLDY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	265	25	0	91.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  N  V  S  C  K  A  S  G  D  T  F  T  N  Y
                    Query_2690   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAACGTTTCCTGCAAGGCGTCTGGCGACACTTTCACCAACTA  90
V  91.4% (265/290)  IGHV1-46*01  6    ...................................................G..............A.....AT....C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  H  W  V  R  Q  A  P  G  L  G  L  E  W  M  A  M  I  N  P  T  G  G  R  T  T  Y  T  Q
                    Query_2690   91   CTATATACACTGGGTGCGACAGGCCCCTGGACTTGGGCTTGAGTGGATGGCAATGATCAACCCTACTGGTGGTAGGACAACGTACACACA  180
V  91.4% (265/290)  IGHV1-46*01  96   ......G.........................AA................G...A..........G.........C....GC...G....  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  L  Q  G  R  V  T  L  T  R  E  T  S  T  S  T  V  Y  M  E  L  R  S  L  T  S  E  D  T  A
                    Query_2690   181  GAAGTTACAGGGCAGAGTCACCTTGACTAGGGAGACGTCCACGAGCACAGTGTACATGGAACTGAGAAGCCTGACATCTGAGGACACGGC  270
V  91.4% (265/290)  IGHV1-46*01  186  ......C...............A....C.....C.................C........G.....C.......G...............  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  G  S  W  P  I  L  V  R  G  V  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S
                    Query_2690   271  CGTCTATTACTGTGCGAGAGGCAGTTGGCCCATTCTGGTTCGGGGAGTCCCTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTC  360
V  91.4% (265/290)  IGHV1-46*01  276  ...G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (13/13)   IGHD3-10*01  10   -----------------------------------.............------------------------------------------  22
J  100.0% (42/42)   IGHJ4*02     7    -----------------------------------------------------.....................................  43

                                           
                                        S  
                    Query_2690   361  CTCAG  365
J  100.0% (42/42)   IGHJ4*02     44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_238272

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD5-12*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CCA	ATATAGTGGC	CCCCAGATCC	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGCCAATATAGTGGCCCCCAGATCCGCTTTCGATATC	GKANIVAPRSAFDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  A  M  T  W  V  R  Q  V  P  G  K  G  L  
                    Query_2691   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAGCAACTATGCCATGACCTGGGTCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-23*01  47   .....................C.......................G...........G..............C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  Q  S  A  Y  Y  A  D  S  V  K  G  R  F  T  M  S  R  D  N  S  
                    Query_2691   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTCAAAGTGCATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATGTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-23*01  137  .............................GGT..CA.....................................C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  M  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  G  K  A  N  I  V  A  P  R  
                    Query_2691   181  AGAACACGATGTATCTGCAAATGAACAGCCTGAGGGCCGAGGACACGGCCATATATTACTGTGGGAAAGCCAATATAGTGGCCCCCAGAT  270
V  94.4% (235/249)  IGHV3-23*01  227  ........C.........................A...............G............C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD5-12*01  5    ------------------------------------------------------------------------..........--------  14

                                      ------------->                                  
                                      S  A  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2691   271  CCGCTTTCGATATCTGGGGCCAAGGGACACTGGTTACCGTCTCTTCAG  318
J  93.5% (43/46)    IGHJ3*02     5    --.....T.....................A....C.............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_238275

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           272     2e-75
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ATTACTCTGGTTCGGGGA	AAAGTCAAGGATTTCGGAAAT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGATTACTCTGGTTCGGGGAAAAGTCAAGGATTTCGGAAATTGGCTCGACCCC	ARDRITLVRGKVKDFGNWLDP	246	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	23	7	0	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	97	17	0	85.1
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	212	38	0	84.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  I  S  D  G  G  Y  T  W  N  W  I  R  Q  H  P  Q  K  G  
                    Query_2692   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCATCAGTGATGGTGGTTATACCTGGAATTGGATCCGCCAGCACCCACAGAAGGGCC  93
V  84.8% (212/250)  IGHV4-31*03  50   .....TCC...A..................G.........CAG.........CTA.....GC..................GG........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  L  G  S  I  A  Y  S  G  R  A  D  Y  N  P  S  L  R  S  R  L  S  V  S  K  D  T  S  
                    Query_2692   94   TGGAGTGGCTTGGGTCCATCGCTTACAGTGGGAGAGCCGATTACAATCCGTCCCTCAGGAGTCGACTTTCCGTGTCGAAAGACACGTCTA  183
V  84.8% (212/250)  IGHV4-31*03  140  ........A......A....TA............CA..T.C.....C..........A.......G..A..A.A..AGT...........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  Q  V  S  L  N  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  I  T  L  V  R  
                    Query_2692   184  AGAACCAGGTCTCCCTTAACGTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTATTGTGCGAGAGATCGGATTACTCTGGTTCGGG  273
V  84.8% (212/250)  IGHV4-31*03  230  ........T.......G..GC...............................G.....C...........--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD3-10*01  3    --------------------------------------------------------------------------......A.........  18

                                      DR3-IMGT-------------------------->                                  
                                      G  K  V  K  D  F  G  N  W  L  D  P  W  G  Q  G  T  Q  V  I  V  T  S  
                    Query_2692   274  GAAAAGTCAAGGATTTCGGAAATTGGCTCGACCCCTGGGGCCAGGGAACCCAGGTCATCGTCACCTCAG  342
D  94.4% (17/18)    IGHD3-10*01  19   ..-------------------------------------------------------------------  20
J  91.3% (42/46)    IGHJ5*02     6    -----------------------...T........................T.....C....T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_238274

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           335     4e-94
IGHD2-21*01                                                                                           21.8    0.042
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-21*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGGCTCC	GCATCTTGTGGTGG	GGAAAACTCCTCGTCATGTTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCCGGCTCCGCATCTTGTGGTGGGGAAAACTCCTCGTCATGTTCTTGATGTC	VRDPAPHLVVGKTPRHVLDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  R  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2693   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCAGCTATAGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  92.8% (232/250)  IGHV3-21*01  47   ...........................................T........C................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  N  S  S  G  N  N  I  K  Y  A  D  S  M  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2693   91   AGTGGGTCTCCTCCATTAATAGTAGCGGAAATAATATAAAGTACGCAGACTCAATGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.8% (232/250)  IGHV3-21*01  137  ..........A.......G......TA.T.G.T.C...T.C............G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  L  N  S  L  R  A  E  D  T  G  V  Y  Y  C  V  R  D  P  A  P  H  L  V  
                    Query_2693   181  AGAACTCACTGTATCTGCAACTGAACAGCCTGAGAGCCGAGGACACGGGTGTTTATTACTGTGTGAGAGATCCGGCTCCGCATCTTGTGG  270
V  92.8% (232/250)  IGHV3-21*01  227  ....................A...........................C...G..........C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.9% (13/14)    IGHD2-21*01  2    -------------------------------------------------------------------------------....A......  12

                                      R3-IMGT------------------------>                                
                                      V  G  K  T  P  R  H  V  L  D  V  W  G  Q  G  T  M  V  S  V  S  S
                    Query_2693   271  TGGGGAAAACTCCTCGTCATGTTCTTGATGTCTGGGGCCAAGGGACAATGGTCAGCGTCTCTTC  334
D  92.9% (13/14)    IGHD2-21*01  13   ...-------------------------------------------------------------  15
J  97.5% (39/40)    IGHJ3*01     9    ------------------------..............................C.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_238276

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           339     2e-95
IGHD3-9*01                                                                                            29.5    2e-04
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATCCAC	GTATAACGATGTTTTGACTGG	CCAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATCCACGTATAACGATGTTTTGACTGGCCATAACTGGTTCGACCCC	ARGSTYNDVLTGHNWFDP	239	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	25	25	24	1	0	96
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	20	4	0	83.3
FR3-IMGT	125	238	114	109	5	0	95.6
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        L  R  L  S  C  T  A  S  G  F  I  L  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W
                    Query_2694   1    CCTGAGACTCTCCTGTACAGCCTCTGGATTCATTCTCAGTAGTTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTG  90
V  94.3% (231/245)  IGHV3-48*03  51   ................G...............CCT...................C...................................  140
                                        L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W

                                      ---------><-------CDR2-IMGT------><----------------------------------------------------FR3
                                        V  S  Y  I  S  V  R  G  T  T  I  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  H  A  T  N
                    Query_2694   91   GGTTTCATACATTAGTGTTAGAGGTACTACCATATACTACGCAGACTCTGTGCAGGGCCGATTTACCATCTCTAGAGACCACGCCACGAA  180
V  94.3% (231/245)  IGHV3-48*03  141  ................AG...T....G.........................A..........C........C......A......A...  230
                                        V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N

                                      -IMGT----------------------------------------------------><----------------------CDR3-IMGT
                                        S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  S  T  Y  N  D  V  L  T
                    Query_2694   181  CTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGATCCACGTATAACGATGTTTTGAC  270
V  94.3% (231/245)  IGHV3-48*03  231  .................................................................-------------------------  295
                                        S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                           
D  90.5% (19/21)    IGHD3-9*01   1    ------------------------------------------------------------------------....T.....A.......  18

                                      --------------------->                                  
                                        G  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2694   271  TGGCCATAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  326
D  90.5% (19/21)    IGHD3-9*01   19   ...-----------------------------------------------------  21
J  100.0% (49/49)   IGHJ5*02     3    -------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_43436

Length=411
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD1-26*01                                                                                           18.0    0.70  
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCGAGACGTCCCCTTAC	AGTGGGAACTAC	AACAAAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCGAGACGTCCCCTTACAGTGGGAACTACAACAAAGTACTACCACTACGGTATAGACGTC	ARHPRRPLTVGTTTKYYHYGIDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  S  Y
                    Query_2695   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCCGGATACAGCTTTATTAGTTA  90
V  94.5% (275/291)  IGHV5-51*01  6    ....................................C................................T.............CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_2695   91   TTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCCGGTGACTCGGATACCAGATACAACCC  180
V  94.5% (275/291)  IGHV5-51*01  96   C........C.....................................................T........T.............G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  M  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  S  A
                    Query_2695   181  GTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACATGTCCATCAGCACCGCCTACCTCCAGTGGAGCAGCCTGAAGGCCTCGGACAGCGC  270
V  94.5% (275/291)  IGHV5-51*01  186  .......C...................A.C.....A.....................G............................C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        M  Y  Y  C  A  R  H  P  R  R  P  L  T  V  G  T  T  T  K  Y  Y  H  Y  G  I  D  V  W  G  L
                    Query_2695   271  CATGTATTACTGTGCGAGACATCCGAGACGTCCCCTTACAGTGGGAACTACAACAAAGTACTACCACTACGGTATAGACGTCTGGGGCCT  360
V  94.5% (275/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD1-26*01  6    ---------------------------------------.......G....---------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------------------......T..........G.............A  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_2695   361  AGGGACCACGGTCACCGTCTCCTCA  385
J  94.7% (54/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40288536


Query= Query_44318

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           277     9e-77
IGHD6-25*01                                                                                           18.0    0.59 
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTG	GCAGCGGCT	GCCACGAACTTCTATCACGACGAAC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCTGGCAGCGGCTGCCACGAACTTCTATCACGACGAACTGGACGTC	VRDLAAAATNFYHDELDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	13	8	0	61.9
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	211	34	0	86.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  P  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2696   1    ACTCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCCCTGGCTTCTACTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  86.1% (211/245)  IGHV4-59*01  49   ..C..........................T.........AG.A.T.A...........................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  F  Y  Y  N  G  E  S  N  Y  N  P  S  L  K  S  R  V  S  I  S  L  D  M  S  K  S 
                    Query_2696   91   TGGATTGGCCACTTCTACTACAATGGCGAGTCCAACTACAATCCCTCCCTCAAGAGTCGAGTCTCCATTTCTCTGGACATGTCCAAGAGT  180
V  86.1% (211/245)  IGHV4-59*01  139  ........GT.TA....T....G...GAGCA..........C.....................A....A..AG.A....C........AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  F  T  S  V  T  A  A  D  T  A  V  Y  F  C  V  R  D  L  A  A  A  A  T  N  F 
                    Query_2696   181  CAGTTCTCCCTGAAGTTCACTTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGTGAGAGATCTGGCAGCGGCTGCCACGAACTTC  270
V  86.1% (211/245)  IGHV4-59*01  229  ...............C.G.GC...............................A.....C......-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-25*01  8    ---------------------------------------------------------------------.........------------  16

                                      -------------------->                                 
                                       Y  H  D  E  L  D  V  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_2696   271  TATCACGACGAACTGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTCA  324
J  97.6% (40/41)    IGHJ6*02     22   -------------........................C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_44319

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            19.9    0.15 
IGHJ6*02                                                                                              108     8e-28


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCG	GATTTTTGGA	CC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGGATTTTTGGACCACTACTTCTACTACGGTATGGACGTC	ARVGFLDHYFYYGMDV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	234	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  A  V  S  S  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_2697   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGGTCGCCGTCAGTAGTAACTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.1% (234/246)  IGHV3-53*01  47   ................................T..A..........C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  I  I  Y  S  D  G  S  T  Y  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_2697   91   AGTGGGTCTCAATTATTTATAGCGATGGTTCCACATACTCCGCAGACTCCGTAAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  95.1% (234/246)  IGHV3-53*01  137  ...........G............G....AG........A............G.....................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  V  G  F  L  D  H  Y  F  
                    Query_2697   181  ACACCCTGTATCTTCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGTCGGATTTTTGGACCACTACTTCT  270
V  95.1% (234/246)  IGHV3-53*01  227  ....G............................C................................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (10/10)   IGHD3-3*01   8    ---------------------------------------------------------------------..........-----------  17
J  98.3% (58/59)    IGHJ6*02     4    ---------------------------------------------------------------------------------......A..  12

                                      ---------------->                                 
                                      Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2697   271  ACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  98.3% (58/59)    IGHJ6*02     13   ..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_44316

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            282     4e-78
IGHD2-21*02                                                                                           29.5    2e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCTGT	TGCCTCGCT	TATTGTGCTGGTGACTGC	ATCCGCGATAAAACGGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TGCCTCGCTTATTGTGCTGGTGACTGCATCCGCGATAAAACGGCCTACTTTGACTAC	CLAYCAGDCIRDKTAYFDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	44	7	0	86.3
CDR2-IMGT	108	128	21	18	3	0	85.7
FR3-IMGT	129	242	114	102	12	0	89.5
Total	N/A	N/A	242	211	31	0	87.2


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  V  S  V  I  S  S  N  W  W  T  W  V  R  Q  T  P  T  K  G  
                    Query_2698   1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTGGTGTCTCCGTCATCAGCAGTAACTGGTGGACTTGGGTCCGCCAGACCCCAACTAAGGGGC  90
V  87.2% (211/242)  IGHV4-4*01   47   ..A.....TCC...A..................G....A...G...T.............G.............C.....GGG.......  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  D  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  S  
                    Query_2698   91   TGGAGTGGATTGGAGACATCTATTATAGGGGGAACACCAACTACAACCCGTCCCTCGAGAGCCGAGTCACCATCTCAGTGGACAAGTCCA  180
V  87.2% (211/242)  IGHV4-4*01   137  .............G..A......C....T....G......................A....T...........A.....A..........  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  H  F  S  L  N  L  N  S  V  T  A  A  D  T  A  I  Y  F  C  C  L  A  Y  C  A  G  D  C  
                    Query_2698   181  AGAACCACTTCTCCCTGAACCTGAACTCTGTCACCGCCGCGGACACGGCAATATATTTCTGTTGCCTCGCTTATTGTGCTGGTGACTGCA  270
V  87.2% (211/242)  IGHV4-4*01   227  .......G...........G....G......G.................CG.G....G....----------------------------  288
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C                             
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------.......G..........-  22

                                      -IMGT----------------------->                                  
                                      I  R  D  K  T  A  Y  F  D  Y  W  G  P  G  A  P  V  T  V  S  S  
                    Query_2698   271  TCCGCGATAAAACGGCCTACTTTGACTACTGGGGCCCGGGAGCCCCGGTCACCGTCTCCTCAG  333
J  93.6% (44/47)    IGHJ4*02     2    ----------------....................A....A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_44317

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_2699   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_2699   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_2699   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_2699   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_44315

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     1e-95
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	N/A	TCCTTGCCCCCGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCCTTGCCCCCGAACTAC	ASLPPNY	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  T  T  H  T  M  K  W  V  R  Q  A  P  G  K  G  L  
                    Query_2700   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCACTACCCATACCATGAAGTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  94.3% (231/245)  IGHV3-21*01  47   ....................................C.....G..G.T...G......C.................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  T  S  S  S  T  Y  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2700   91   AGTGGGTCGCATCCATTACTAGTAGTAGTACCTACACATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.3% (231/245)  IGHV3-21*01  137  ........T.........G...........GT....T.....................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  S  L  P  P  N  Y  W  G  
                    Query_2700   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTCTATTACTGTGCGTCCTTGCCCCCGAACTACTGGGGCC  270
V  94.3% (231/245)  IGHV3-21*01  227  ................................A...................G............-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  100.0% (39/39)   IGHJ4*02     10   ------------------------------------------------------------------------------............  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_2700   271  AGGGAACCCTGGTCACCGTCTCCTCAG  297
J  100.0% (39/39)   IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_44313

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           336     1e-94
IGHD2-15*01                                                                                           14.1    8.7  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGAGCACTTCGCGATTAAGTATGA	TGCTACT	GGTCCCGATAGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGAGCACTTCGCGATTAAGTATGATGCTACTGGTCCCGATAGTTACTTTGACTAC	ARGEHFAIKYDATGPDSYFDY	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	230	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  A  W  I  R  Q  P  P  G  M  G  L  E 
                    Query_2701   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGGCCTGGATCCGCCAGCCCCCTGGGATGGGACTGGAA  90
V  93.9% (230/245)  IGHV4-34*01  49   ......................................................AG..................A....A...G.....G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_2701   91   TGGATTGGCGAAATCAATCATAGTGGAAGCACCAATTACAACCCGTCCCTCAAGAGCCGAGTCACGATGTCAGTGGACACGTCCAAGAAT  180
V  93.9% (230/245)  IGHV4-34*01  139  ........G..........................C....................T........C..A.....A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  E  H  F  A  I  K  Y  D 
                    Query_2701   181  CAGTTCTCCCTGAGACTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCGAGCACTTCGCGATTAAGTATGAT  270
V  93.9% (230/245)  IGHV4-34*01  229  .............AG..................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD2-15*01  23   -----------------------------------------------------------------------------------------.  23

                                      MGT-------------------------->                                  
                                       A  T  G  P  D  S  Y  F  D  Y  W  G  Q  G  T  L  V  T  A  S  S  
                    Query_2701   271  GCTACTGGTCCCGATAGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGCCTCCTCAG  334
D  100.0% (7/7)     IGHD2-15*01  24   ......----------------------------------------------------------  29
J  97.8% (45/46)    IGHJ4*02     3    ------------------.....................................T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_44310

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*02                                                                                            367     6e-104
IGHD5-18*01                                                                                           14.1    8.9   
IGHJ3*01                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*02	IGHD5-18*01	IGHJ3*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCACA	T	GTGAATACACATATGG	GCAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACATGTGAATACACATATGGGCAATGATGCTTTTGATGTC	AHVNTHMGNDAFDV	263	304	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	49	2	0	96.1
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	106	8	0	93
CDR3-IMGT (germline)	263	267	5	5	0	0	100
Total	N/A	N/A	267	251	16	0	94


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  V  S  L  S  T  Y  G  V  G  V  G  W  I  R
                    Query_2702   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGGTCTCACTCAGTACTTATGGAGTGGGTGTGGGCTGGATCCG  90
V  94.0% (251/267)  IGHV2-5*02   30   .................................................T..........C...AG........................  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  E  A  L  E  W  L  A  L  I  Y  W  D  D  A  N  R  Y  R  P  S  L  R  S  R  L  T
                    Query_2702   91   TCAGCCCCCAGGAGAGGCCCTGGAATGGCTTGCACTCATTTATTGGGATGATGCTAACCGCTACAGACCATCTCTGAGGAGCAGGCTCAC  180
V  94.0% (251/267)  IGHV2-5*02   120  .............A..........G............................A...G........C..........A............  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        V  T  K  D  T  S  K  N  Q  V  V  L  S  M  T  N  M  D  P  V  D  T  A  T  *  H  C  A  H  V
                    Query_2702   181  CGTCACCAAGGACACCTCCAAAAACCAAGTGGTCCTTTCCATGACCAACATGGACCCTGTGGACACAGCCACATAGCACTGTGCACATGT  270
V  94.0% (251/267)  IGHV2-5*02   210  .A.........................G.........A.A...................................TT..........---  296
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A      
D  81.2% (13/16)    IGHD5-18*01  1    ----------------------------------------------------------------------------------------..  2

                                      ---------CDR3-IMGT--------------->                                  
                                        N  T  H  M  G  N  D  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2702   271  GAATACACATATGGGCAATGATGCTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  338
D  81.2% (13/16)    IGHD5-18*01  3    .G.....GC.....------------------------------------------------------  16
J  100.0% (50/50)   IGHJ3*01     1    ------------------..................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_44311

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         321     6e-90
IGHD6-6*01                                                                                            21.8    0.040
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCCGGTTCGT	TATAGCACCTCGTC	G	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCCGGTTCGTTATAGCACCTCGTCGTTTGACTAC	ASPVRYSTSSFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  V  S  G  F  T  F  S  N  Y  A  M  L  W  V  R  Q  A  P  G  K  G  L  
                    Query_2703     1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTCAGTAACTATGCCATGCTCTGGGTCCGCCAGGCTCCGGGCAAGGGGCTGC  90
V  91.5% (226/247)  IGHV3-30-3*01  47   ........................C....................G......T....A..................A............G  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        Q  W  V  G  V  I  S  H  D  G  S  S  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2703     91   AGTGGGTGGGTGTCATTTCCCATGATGGAAGCAGTAAATATTACGGAGACTCCGTGAAGGGCCGATTTACCATCTCCAGAGACAATTCCA  180
V  91.5% (226/247)  IGHV3-30-3*01  137  .........CA..T..A..AT............A......C....C.....................C......................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A  S  P  V  R  Y  S  T  S  
                    Query_2703     181  AGAACACCCTGTATCTGCAAATGAACAGCCTCAGAACTGAGGACACGGCTCTCTATTACTGTGCGAGCCCGGTTCGTTATAGCACCTCGT  270
V  91.5% (226/247)  IGHV3-30-3*01  227  .......G.......................G...G..............G.G..............-----------------------  293
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD6-6*01     4    -----------------------------------------------------------------------------.......G.....  16

                                        ---------->                                  
                                        S  F  D  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_2703     271  CGTTTGACTACTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  315
D  92.9% (13/14)    IGHD6-6*01     17   .--------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02       6    --.........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_258714

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           363     2e-102
IGHD2-8*02                                                                                            10.3    136   
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGGGCATTCGAGCCT	CTGGT	CC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGGGCATTCGAGCCTCTGGTCCCAACTGGTTCGACCCC	AKGGIRASGPNWFDP	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	261	29	0	90


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  T  S  G  G  I  L  N  N  Y
                    Query_2704   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACCTCTGGAGGCATTTTGAACAACTA  90
V  90.0% (261/290)  IGHV1-69*01  6    ..................G.............................................G.T..........CC..C.G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  N  W  L  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  M  P  I  F  G  P  A  N  Y  A  Q
                    Query_2704   91   TGGGATCAATTGGCTCCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCATCATGCCTATCTTTGGTCCAGCAAACTACGCACA  180
V  90.0% (261/290)  IGHV1-69*01  96   ..CT....GC...G.G......................................G.....C............A................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  N  T  A  Y  M  E  L  S  S  L  R  S  G  D  P  A
                    Query_2704   181  GAAGTTCCAGGGCAGAGTCACCATTACCGCGGACGAGTCCACAAACACAGCCTACATGGAATTGAGCAGCCTGAGATCTGGGGACCCGGC  270
V  90.0% (261/290)  IGHV1-69*01  186  .....................G..............A.....G.G...............GC..................A....A....  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  F  C  A  K  G  G  I  R  A  S  G  P  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2704   271  CATGTACTTCTGTGCGAAAGGGGGCATTCGAGCCTCTGGTCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  90.0% (261/290)  IGHV1-69*01  276  .G....T.A........G..----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD2-8*02   12   -----------------------------------.....--------------------------------------------------  16
J  100.0% (50/50)   IGHJ5*02     2    ------------------------------------------................................................  49

                                        
                                        
                    Query_2704   361  AG  362
J  100.0% (50/50)   IGHJ5*02     50   ..  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_258715

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           341     5e-96
IGHD1-26*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-26*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GGGGA	AGTGGGAGCTAC	GAGGGCG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGGGGGAAGTGGGAGCTACGAGGGCGTTGACTAC	HRGKWELRGR*L	239	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	11	0	0	100
CDR1-IMGT	19	42	24	21	3	0	87.5
FR2-IMGT	43	93	51	51	0	0	100
CDR2-IMGT	94	123	30	29	1	0	96.7
FR3-IMGT	124	238	115	112	2	1	97.4
CDR3-IMGT (germline)	239	245	7	6	1	0	85.7
Total	N/A	N/A	238	230	7	1	96.6


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  P  F  I  Y  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  
                    Query_2705   8    GTGCAGCCTCTGGATTCCCTTTCATTTACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTA  97
V  96.6% (230/238)  IGHV3-15*01  65   .................A......G.A...............................................................  154
                                         A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  

                                      -------CDR2-IMGT---------><----------------------------------------------------FR3-IMGT---
                                      K  S  K  T  N  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  K  H  A  
                    Query_2705   98   AAAGCAAAACTAATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAAACACGCTG  187
V  96.6% (230/238)  IGHV3-15*01  155  ...........G................................................................-.............  243
                                      K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D  S   K  N  T  L 

                                      --------------------------------------------------><--------------CDR3-IMGT-------------->
                                      V  S  A  N  E  *  P  E  N  R  G  H  I  R  V  L  L  C  H  R  G  K  W  E  L  R  G  R  *  L  
                    Query_2705   188  TATCTGCAAATGAATAGCCTGAAAACCGAGGACACATCCGTGTATTACTGTGCCACAGGGGGAAGTGGGAGCTACGAGGGCGTTGACTAC  277
V  96.6% (230/238)  IGHV3-15*01  244  ..............C.....................G..............A......--------------------------------  301
                                       Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                                  
D  100.0% (12/12)   IGHD1-26*01  6    ---------------------------------------------------------------............---------------  17
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------........  14

                                                                        
                                      L  G  A  G  N  P  G  H  R  L  L   
                    Query_2705   278  TGGGGGCAGGGAACCCTGGTCACCGTCTCCTCAG  311
J  97.6% (41/42)    IGHJ4*02     15   .....C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_21001

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           369     2e-104
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCAAC	GGGTATAGAAGTGGC	AGATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAACGGGTATAGAAGTGGCAGATAACTACTACTATGGTTTGGACGTC	AATGIEVADNYYYGLDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	261	25	0	91.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  T  C  A  A  S  G  F  T  F  R  S  H
                    Query_2706   1    GCAGCTGGTGCAGTCTGGAGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCACCTGTGCAGCCTCTGGATTCACCTTCAGAAGTCA  90
V  91.3% (261/286)  IGHV3-30*03  6    ..........G.......G....................................T............................T..CT.  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  M  Q  W  V  R  Q  A  P  G  K  G  L  E  W  L  A  V  I  S  F  N  G  S  H  T  Y  Y  A  D
                    Query_2706   91   TGGCATGCAGTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAATGGTTGGCAGTTATCTCATTTAATGGAAGTCATACATACTATGCAGA  180
V  91.3% (261/286)  IGHV3-30*03  96   .........C................................G...G..........A....A.G........A...A............  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  T  V  S  R  D  N  S  K  N  A  L  Y  L  Q  M  A  S  L  R  S  A  D  T  A
                    Query_2706   181  CTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCAAGAACGCACTGTATCTGCAAATGGCCAGCCTGAGATCTGCGGACACGGC  270
V  91.3% (261/286)  IGHV3-30*03  186  ...............A......A.......................A.G...............AA..........G...A.........  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  F  C  A  A  T  G  I  E  V  A  D  N  Y  Y  Y  G  L  D  V  W  G  H  G  T  T  V  T  V
                    Query_2706   271  TGTTTACTTCTGTGCGGCAACGGGTATAGAAGTGGCAGATAACTACTACTATGGTTTGGACGTCTGGGGCCACGGGACCACGGTCACCGT  360
V  91.3% (261/286)  IGHV3-30*03  276  ...G..T.A.......--------------------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                           
D  93.3% (14/15)    IGHD6-19*01  1    ---------------------........C......------------------------------------------------------  15
J  94.6% (53/56)    IGHJ6*02     7    -----------------------------------------..........C...A................A.................  55

                                             
                                        S  S 
                    Query_2706   361  CTCCTCA  367
J  94.6% (53/56)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_258710

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           377     1e-106
IGHD7-27*01                                                                                           12.2    36    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD7-27*01	IGHJ4*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACTTCTCCCCGGGTCCCC	CTGGGG	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACTTCTCCCCGGGTCCCCCTGGGGCCCTTTGACTCT	ARTLLPGSPWGPLTL	284	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	265	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  A  V  R  R  P  G  E  S  L  T  I  S  C  Q  G  S  G  Y  R  V  P  T  H
                    Query_2707   1    GCAGCTGGTGCAGTCTGGAGCAGCGGTGAGAAGGCCCGGGGAGTCTCTGACGATTTCCTGTCAGGGTTCTGGATACAGAGTTCCCACCCA  90
V  91.7% (265/289)  IGHV5-51*01  6    .......................A.....A..A.................A...C......A................CT..A...G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_2707   91   TTGGATCGGGTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  91.7% (265/289)  IGHV5-51*01  96   C........C......................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  V  N  T  A  Y  L  Q  W  S  S  L  K  A  S  A  P  A
                    Query_2707   181  GTCCTTCCAAGGCCAGGTCACCATCTCTGTCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGCCCCCGC  270
V  91.7% (265/289)  IGHV5-51*01  186  ...........................A.C..........A...G........................C.............A.A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT---------------->                                 
                                        T  Y  F  C  A  R  T  L  L  P  G  S  P  W  G  P  L  T  L  G  A  R  E  P  W  S  P  S  P  Q
                    Query_2707   271  CACATATTTCTGTGCGAGAACACTTCTCCCCGGGTCCCCCTGGGGCCCTTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  360
V  91.7% (265/289)  IGHV5-51*01  276  ..TG....A..........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD7-27*01  5    ---------------------------------------......---------------------------------------------  10
J  95.5% (42/44)    IGHJ4*02     5    -----------------------------------------------........AC.................................  47

                                       
                                       
                    Query_2707   361  G  361
J  95.5% (42/44)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_258712

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           397     8e-113
IGHD1-26*01                                                                                           12.2    36    
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCCCTGCGTTCCC	AGTGGG	CCTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGACCCCTGCGTTCCCAGTGGGCCTTTGATGCTATTGATATC	VRPLRSQWAFDAIDI	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	106	8	0	93
CDR3-IMGT (germline)	292	297	6	4	2	0	66.7
Total	N/A	N/A	294	274	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  E  N  S  F  T 
                    Query_2708   4    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGAAAACAGCTTTACC  93
V  93.2% (274/294)  IGHV5-51*03  1    .....G........G.............................................................G.T...........  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  W  I  G  W  I  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  S  P  G  D  S  D  T  R  Y 
                    Query_2708   94   AACTACTGGATCGGCTGGATACGCCAGATGCCCGGGAAAGGCCTCGAGTGGATGGGGTTCATCTCTCCTGGTGACTCTGATACCAGATAC  183
V  93.2% (274/294)  IGHV5-51*03  91   .G................G.G.......................G............A......A.........................  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  S  F  Q  G  Q  V  T  V  S  A  D  R  S  I  T  T  A  Y  L  Q  W  N  S  L  K  A  S  D 
                    Query_2708   184  AGCCCGTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAGGTCCATCACCACCGCCTACCTGCAGTGGAACAGCCTTAAGGCCTCGGAC  273
V  93.2% (274/294)  IGHV5-51*03  181  ...........................A............A........G....................G......G............  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  F  Y  C  V  R  P  L  R  S  Q  W  A  F  D  A  I  D  I  W  G  Q  G  T  M  V  T  V 
                    Query_2708   274  ACCGCTGTGTTTTACTGTGTGCGACCCCTGCGTTCCCAGTGGGCCTTTGATGCTATTGATATCTGGGGCCAAGGGACAATGGTCACCGTC  363
V  93.2% (274/294)  IGHV5-51*03  271  .....CA...A........C.A..------------------------------------------------------------------  294
                                       T  A  M  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD1-26*01  6    -------------------------------------......-----------------------------------------------  11
J  98.0% (49/50)    IGHJ3*02     1    -----------------------------------------------.......T...................................  43

                                             
                                       S  S  
                    Query_2708   364  TCTTCAG  370
J  98.0% (49/50)    IGHJ3*02     44   .......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_258713

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*02                                                                                            414     5e-118
IGHD5-18*01                                                                                           23.8    0.012 
IGHJ3*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*02	IGHD5-18*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GTTA	GTGGATACAACTATG	AA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTTAGTGGATACAACTATGAAGATGCTCTTGACATC	AVSGYNYEDALDI	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	71	4	0	94.7
CDR1-IMGT	79	102	24	24	0	0	100
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	294	3	3	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_2709   4    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATACACCTTCACC  93
V  95.5% (278/291)  IGHV1-2*02   1    .....G.....G...........G...............................................T..................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       G  Y  Y  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  D  T  N  Y 
                    Query_2709   94   GGCTACTATATACACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGACACAAACTAT  183
V  95.5% (278/291)  IGHV1-2*02   91   ...........G...................................................................G..........  180
                                       G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  S  L  T  S  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  S  S  D  D 
                    Query_2709   184  GCACAGAAGTTTCAGGGCCGGGTCTCCCTGACGAGCGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGTTCTGACGAC  273
V  95.5% (278/291)  IGHV1-2*02   181  ..................A.....A..A....C..G............................................A.........  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  Y  C  A  V  S  G  Y  N  Y  E  D  A  L  D  I  W  G  Q  G  T  M  V  I  V  S  S 
                    Query_2709   274  ACGGCCGTGTATTATTGTGCGGTTAGTGGATACAACTATGAAGATGCTCTTGACATCTGGGGCCAAGGGACAATGGTCATCGTCTCTTCA  363
V  95.5% (278/291)  IGHV1-2*02   271  ..............C......---------------------------------------------------------------------  291
                                       T  A  V  Y  Y  C  A                                                                      
D  93.3% (14/15)    IGHD5-18*01  1    -------------------------.........G.....--------------------------------------------------  15
J  93.9% (46/49)    IGHJ3*02     2    ------------------------------------------......T....T.........................C..........  49

                                       
                                       
                    Query_2709   364  G  364
J  93.9% (46/49)    IGHJ3*02     50   .  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_258719

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           394     7e-112
IGHD3-3*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	GGAGAGTCTG	CGATTTCTGGAGTGGTTAT	CCCCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTAC	AREESLRFLEWLSPDY	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	296	8	7	1	0	87.5
Total	N/A	N/A	296	274	22	0	92.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  L  T 
                    Query_2710   1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTAAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTGACC  90
V  92.6% (274/296)  IGHV1-18*01  1    .....T...............................................G.................T..............T...  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  S  M  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  S  N  I  N  Y 
                    Query_2710   91   AGATATAGTATGTCTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATAGCAACATAAATTAT  180
V  92.6% (274/296)  IGHV1-18*01  91   ..C...G....CAGC....................................................C.......G.T....C...C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  L  L  G  R  V  T  M  T  I  D  T  S  A  N  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_2710   181  GCACAGAAACTCCTGGGCAGAGTCACCATGACCATAGACACATCCGCGAACACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  270
V  92.6% (274/296)  IGHV1-18*01  181  ........G....A....................C..........A...G........................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  E  E  S  L  R  F  L  E  W  L  S  P  D  Y  W  G  Q  G  T  L  V  I 
                    Query_2710   271  ACGGCCGTGTATTATTGTGCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTACTGGGGCCAGGGAACCCTGGTCATC  360
V  92.6% (274/296)  IGHV1-18*01  271  ..............C........A..----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.7% (18/19)    IGHD3-3*01   7    ------------------------------------......T............-----------------------------------  25
J  97.1% (34/35)    IGHJ4*02     9    ------------------------------------------------------------............................C.  38

                                           
                                       V  S
                    Query_2710   361  GTCTC  365
J  97.1% (34/35)    IGHJ4*02     39   .....  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_21000

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD6-6*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTC	ATTREQLVPIFDF	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	269	18	0	93.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  L  S  S  Y
                    Query_2711   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATTTCCTGTAAGGGTTCTGGATACAGATTAAGCAGTTA  90
V  93.7% (269/287)  IGHV5-51*01  6    ......................................................C.......................C..T.C...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  E  T  K  Y  S  P
                    Query_2711   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCGTCTATCCTGGTGACTCTGAGACCAAATACAGCCC  180
V  93.7% (269/287)  IGHV5-51*01  96   C.......G..........................................G...A...................T....G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  A  S  G  T  A  F  L  Q  W  D  S  L  K  A  S  D  T  A
                    Query_2711   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGGCCAGCGGCACCGCCTTCCTGCAGTGGGACAGCCTGAAGGCCTCGGACACCGC  270
V  93.7% (269/287)  IGHV5-51*01  186  .......C.............................T...T.A.........A..........AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_2711   271  CATGTATTACTGTGCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  356
V  93.7% (269/287)  IGHV5-51*01  276  .................---------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------.......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_333302

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           346     2e-97
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGG	GTAATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGGTAATACGGGGCACTACTTTGACTAC	ARRIAVGNTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	43	8	0	84.3
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	255	34	0	88.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  A  L  K  I  S  C  K  G  S  G  S  A  F  T  S  Y
                    Query_2712   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGGCTCTGAAGATCTCCTGTAAGGGTTCTGGATCCGCCTTTACCAGCTA  90
V  88.2% (255/289)  IGHV5-51*03  6    ...........................................T..............................A.AG............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  S  V  G  V  R  Q  V  P  G  R  G  L  Q  W  M  G  I  L  Y  P  G  G  A  N  P  R  Y  S  P
                    Query_2712   91   CGGGAGCGTCGGGGTGCGCCAAGTGCCCGGGAGAGGCCTGCAGTGGATGGGGATTCTCTATCCTGGGGGCGCAAATCCCCGATACAGCCC  180
V  88.2% (255/289)  IGHV5-51*03  96   .T...T..G.T..........GA.........A.......G.............CA..........T.A.T.TG..A..A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  Q  G  Q  A  P  S  P  A  D  K  S  N  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_2712   181  GGCCTTCCAAGGCCAGGCCCCCAGCCCAGCCGACAAGTCCAACAGGACCGCATACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  88.2% (255/289)  IGHV5-51*03  186  .T...............T.A...T.T...............T...C.....C.....G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  G  N  T  G  H  Y  F  D  Y  G  G  Q  G  T  L  V  T  V  S  S
                    Query_2712   271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGGTAATACGGGGCACTACTTTGACTACGGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  88.2% (255/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD6-19*01  5    ----------------------..........----------------------------------------------------------  14
J  97.9% (47/48)    IGHJ4*02     1    --------------------------------------------..............T...............................  46

                                        
                                        
                    Query_2712   361  AG  362
J  97.9% (47/48)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_333301

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           291     5e-81
IGHD6-6*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	10	1	0	90.9
CDR1-IMGT	27	50	24	19	5	0	79.2
FR2-IMGT	51	101	51	51	0	0	100
CDR2-IMGT	102	125	24	19	5	0	79.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	230	208	22	0	90.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  
                    Query_2713   16   GTGCAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATCA  105
V  90.4% (208/230)  IGHV3-21*01  65   ..........T............AG...C....GC.....................................................T.  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  R  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  G  K  N  S  L  Y  L  
                    Query_2713   106  GTAGTAGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGGCAAGAATTCACTGTATCTGC  195
V  90.4% (208/230)  IGHV3-21*01  155  .......T...AGT......T.C..C..A......G..A..............................C......C.............  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><--------------------CDR3-IMGT----------------
                                      Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  S  S  R  P  L  F  
                    Query_2713   196  AAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTG  285
V  90.4% (208/230)  IGHV3-21*01  245  .....AA...........................G...............----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------.......--------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------------------------------------------------------------------------------....  9

                                      ---->                                  
                                      D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2713   286  ACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.7% (42/43)    IGHJ4*02     10   ...A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_333307

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           329     3e-92
IGHD7-27*01                                                                                           16.1    2.2  
IGHJ3*01                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD7-27*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGGC	AACTGGGG	CCGAAGCCGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGGCAACTGGGGCCGAAGCCGGTGCTTTAGATGTC	ARDPATGAEAGALDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  R  K  Y  A  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2714   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTCCGCAAATATGCTCTGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  92.0% (230/250)  IGHV3-64*01  47   ......................................T..A.T.GC......A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  G  I  S  G  D  G  G  T  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2714   91   AATTTGTTTCAGGTATCAGTGGTGATGGGGGGACCACTTATTATGCAAACTCTGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-64*01  137  ...A........C...T...A..A.......T.G...A....................................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  V  G  R  L  R  L  E  D  M  G  V  Y  Y  C  A  R  D  P  A  T  G  A  E  
                    Query_2714   181  AGAACACGCTGTATCTTCAAGTGGGCAGACTGAGACTTGAGGACATGGGTGTTTATTACTGTGCGAGAGATCCGGCAACTGGGGCCGAAG  270
V  92.0% (230/250)  IGHV3-64*01  227  ....................A.......C......GC...........C...G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD7-27*01  3    ----------------------------------------------------------------------------........------  10

                                      ---------------->                                  
                                      A  G  A  L  D  V  W  G  E  G  T  V  V  T  V  S  P  
                    Query_2714   271  CCGGTGCTTTAGATGTCTGGGGCGAAGGGACAGTGGTCACCGTGTCTCCAG  321
J  89.4% (42/47)    IGHJ3*01     4    ----......T............C........A..........C...T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_333305

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GTTCTCC	ATTGTAGTAGTTCCAG	TCCCGGATGAAA	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGTTCTCCATTGTAGTAGTTCCAGTCCCGGATGAAAACTCCTACGGAATGGACGTC	AKEFSIVVVPVPDENSYGMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2715   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTTACCACCCATGCCATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-23*01  47   .........................C................G..G.T...............................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  V  T  G  T  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_2715   91   AGTGGGTCGCAAGCGTTACTGGTACTGGAGGCAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACCCCA  180
V  90.8% (227/250)  IGHV3-23*01  137  ........T..GCTA...G.....G...T..T.....................................................TT...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  I  L  F  L  Q  M  N  S  P  R  A  E  D  T  A  V  Y  Y  C  A  K  E  F  S  I  V  V  V  
                    Query_2715   181  AGAACATCCTGTTTCTACAGATGAACAGCCCGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAAGAGTTCTCCATTGTAGTAGTTC  270
V  90.8% (227/250)  IGHV3-23*01  227  ......CG....A...G..A..........T.....................A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD2-2*01   6    -----------------------------------------------------------------------------...........A.  18

                                      DR3-IMGT-------------------------->                                 
                                      P  V  P  D  E  N  S  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  A  S 
                    Query_2715   271  CAGTCCCGGATGAAAACTCCTACGGAATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCGCCTCA  338
D  93.8% (15/16)    IGHD2-2*01   19   ...-----------------------------------------------------------------  21
J  92.5% (49/53)    IGHJ6*02     10   ---------------...A......T.................A..................T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_333304

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           344     6e-97
IGHD1-26*01                                                                                           10.3    118  
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TAGTG	CGTCCGCTCGAGTTTTA	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATAGTGCGTCCGCTCGAGTTTTAGACGTC	ARDSASARVLDV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  D  A  P  G  F  T  F  S  S  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2716   1    GGTCCCTGAGACTCTCCTGTGACGCCCCTGGATTCACCTTTAGTAGCCACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-74*01  47   .....................CA...T.............C......T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  S  T  D  G  S  R  T  T  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  T  
                    Query_2716   91   TGTGGGTCTCACGTATTAGTACTGATGGGAGTCGCACAACCTACGTGGACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  94.0% (235/250)  IGHV3-74*01  137  ..................A..G..........A......G.....C..........A.............................G...  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  A  S  A  R  V  
                    Query_2716   181  AGAACACACTGTATCTGCAATTGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGAGATAGTGCGTCCGCTCGAGTTT  270
V  94.0% (235/250)  IGHV3-74*01  227  .......G............A...............................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  5    ----------------------------------------------------------------------.....---------------  9

                                      ------->                                 
                                      L  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_2716   271  TAGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  311
J  97.4% (38/39)    IGHJ6*02     24   --............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_333309

Length=315
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            296     2e-82
IGHD3-16*01                                                                                           12.2    29   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	N/A	TGGGGG	GGGCGGGATGGCAACCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGGGGGGCGGGATGGCAACCCGACTAC	VGGAGWQPDY	230	259	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	20	4	0	83.3
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	230	1	1	0	0	100
Total	N/A	N/A	217	203	14	0	93.5


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  L  I  F  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  E  Q  D 
                    Query_2717   14   TCTGGACTCATCTTTAGTGACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAGAGCAAGAT  103
V  93.5% (203/217)  IGHV3-7*01   73   ......T...C.......AG...........G.................................................A........  162
                                       S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  K  Q  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  V  F  L  Q  M  N 
                    Query_2717   104  GGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAATTCAGTGTTTCTGCAAATGAAT  193
V  93.5% (203/217)  IGHV3-7*01   163  ............T.......................................................C...C...A............C  252
                                       G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><----------CDR3-IMGT--------->                        
                                       S  L  R  A  E  D  T  A  V  Y  F  C  V  G  G  A  G  W  Q  P  D  Y  W  G  Q  G  T  L  V  T 
                    Query_2717   194  AGCCTGAGAGCCGAGGACACGGCTGTGTACTTTTGTGTGGGGGGGGCGGGATGGCAACCCGACTACTGGGGCCAGGGAACCCTGGTCACC  283
V  93.5% (203/217)  IGHV3-7*01   253  .............................T.AC....-----------------------------------------------------  289
                                       S  L  R  A  E  D  T  A  V  Y  Y  C                                                       
D  100.0% (6/6)     IGHD3-16*01  17   -------------------------------------......-----------------------------------------------  22
J  100.0% (38/38)   IGHJ4*02     9    ------------------------------------------------------------..............................  38

                                              
                                       V  S  S
                    Query_2717   284  GTCTCCTC  291
J  100.0% (38/38)   IGHJ4*02     39   ........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30410208


Query= Query_54524

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           349     3e-98
IGHD3-16*01                                                                                           18.0    0.64 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	278	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	277	114	95	13	6	83.3
CDR3-IMGT (germline)	278	283	6	6	0	0	100
Total	N/A	N/A	289	258	25	6	89.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P  R  Y
                    Query_2718   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCCGTTA  90
V  89.3% (258/289)  IGHV5-51*03  6    .......................................................T.....A....T..........GC..TA..A.C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_2718   91   TTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGTCC  180
V  89.3% (258/289)  IGHV5-51*03  96   C........C.......................................................G.....................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D  T  A
                    Query_2718   181  GGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACACTGC  264
V  89.3% (258/289)  IGHV5-51*03  186  .T.....C.A...................C...C........CAGCACC.C...............C..C.................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2718   265  CATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  353
V  89.3% (258/289)  IGHV5-51*03  276  ...G........T......----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD3-16*01  18   --------------------........T...---------------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    ---------------------------------------......T......G.................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_83868

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGGGAA	AACGAC	TGGGATCGTAGGTGGTCCGGT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGGGAAAACGACTGGGATCGTAGGTGGTCCGGTTTTCACTTC	ASRENDWDRRWSGFHF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	224	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2719   1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.6% (224/242)  IGHV4-59*08  49   ....................T......................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       L  I  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S  R  N 
                    Query_2719   91   TTGATTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGTCGACTCACCATCTCAGTAGACACGTCGAGGAAC  180
V  92.6% (224/242)  IGHV4-59*08  139  .G......G...A........A........A.....................A.......G.......A..............C.A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  G  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  N  D  W  D  R  R  W 
                    Query_2719   181  CAGTTCTCCCTGGGCGTGAACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCGAGCCGGGAAAACGACTGGGATCGTAGGTGG  270
V  92.6% (224/242)  IGHV4-59*08  229  ............AAGC...G.........C................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD1-1*01   12   ---------------------------------------------------------------------......---------------  17

                                      -------------->                                  
                                       S  G  F  H  F  W  G  P  G  T  L  V  T  V  S  S  
                    Query_2719   271  TCCGGTTTTCACTTCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  319
J  93.0% (40/43)    IGHJ4*02     6    ------...G...A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_54526

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_2720   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_2720   91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_2720   181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_2720   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_54527

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           277     8e-77
IGHD7-27*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GAAC	AACTGGGGA	ATC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGAACAACTGGGGAATCGACTAC	ARNNWGIDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	96	18	0	84.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	212	35	0	85.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  R  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2721   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAGGCACTGGATGCACTGGGTCCGCCAAGCTCCAGGTAAGGGGCTGC  90
V  85.8% (212/247)  IGHV3-74*01  47   ...........................................T..CT...............................G.........G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      L  W  V  A  R  I  D  Y  D  G  G  T  L  D  Y  A  A  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_2721   91   TGTGGGTCGCACGTATTGACTACGATGGGGGTACGCTGGACTATGCGGCCTCCGTGGAGGGACGATTCACCATCTCCAGAGACAACGCCG  180
V  85.8% (212/247)  IGHV3-74*01  137  ........T........A.TAGT......A...GCACAAG...C....A.......A....C...........................A  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      A  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  S  A  V  Y  Y  C  A  R  N  N  W  G  I  D  Y  
                    Query_2721   181  CCAACACGCTCTATCTGCAGATGAATAGTCTAAGAGTCGAGGACTCGGCTGTCTATTATTGCGCAAGGAACAACTGGGGAATCGACTACT  270
V  85.8% (212/247)  IGHV3-74*01  227  AG........G........A.....C.....G....C.......A.......G.....C..T.....-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD7-27*01  3    -----------------------------------------------------------------------.........----------  11
J  97.5% (39/40)    IGHJ4*02     9    -----------------------------------------------------------------------------------.......  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2721   271  GGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  303
J  97.5% (39/40)    IGHJ4*02     16   ......................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_54520

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            294     6e-82
IGHD2-21*02                                                                                           29.5    2e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCTGT	TGCCTCGCT	TATTGTGCTGGTGACTGC	ATCCGCGATAAAACGGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TGCCTCGCTTATTGTGCTGGTGACTGCATCCGCGATAAAACGGCCTACTTTGACTAC	CLAYCAGDCIRDKTAYFDY	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	44	7	0	86.3
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	102	12	0	89.5
Total	N/A	N/A	240	214	26	0	89.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  V  S  V  I  S  S  N  W  W  T  W  V  R  Q  T  P  T  K  G  L 
                    Query_2722   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGTCTCCGTCATCAGCAGTAACTGGTGGACTTGGGTCCGCCAGACCCCAACTAAGGGGCTG  90
V  89.2% (214/240)  IGHV4-4*01   49   ...............................G....A...G...T.............G.............C.....GGG.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_2722   91   GAGTGGATTGGAGACATCTATTATAGGGGGAACACCAACTACAACCCGTCCCTCGAGAGCCGAGTCACCATCTCAGTGGACAAGTCCAAG  180
V  89.2% (214/240)  IGHV4-4*01   139  ...........G..A......C....T....G......................A....T...........A.....A............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       N  H  F  S  L  N  L  N  S  V  T  A  A  D  T  A  I  Y  F  C  C  L  A  Y  C  A  G  D  C  I 
                    Query_2722   181  AACCACTTCTCCCTGAACCTGAACTCTGTCACCGCCGCGGACACGGCAATATATTTCTGTTGCCTCGCTTATTGTGCTGGTGACTGCATC  270
V  89.2% (214/240)  IGHV4-4*01   229  .....G...........G....G......G.................CG.G....G....------------------------------  288
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C                               
D  94.4% (17/18)    IGHD2-21*02  5    ---------------------------------------------------------------------.......G..........---  22

                                      MGT----------------------->                                  
                                       R  D  K  T  A  Y  F  D  Y  W  G  P  G  A  P  V  T  V  S  S  
                    Query_2722   271  CGCGATAAAACGGCCTACTTTGACTACTGGGGCCCGGGAGCCCCGGTCACCGTCTCCTCAG  331
J  93.6% (44/47)    IGHJ4*02     2    --------------....................A....A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_54521

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           308     4e-86
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	246	1	1	0	0	100
Total	N/A	N/A	243	220	23	0	90.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  T  S  T  G  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_2723   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCACCAGCACTGGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGCAAGGGGC  93
V  90.5% (220/243)  IGHV4-39*01  50   .....TCC...A..................G.....T.....G.A...G.................................G.......  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  T  I  Y  Y  S  R  I  T  Y  S  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_2723   94   TGGAGTGGATTGGGACTATCTATTATAGTAGAATTACCTACTCTGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCCA  183
V  90.5% (220/243)  IGHV4-39*01  140  ...............G.............G.G.GC.......ACA..........C.................A................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S  
                    Query_2723   184  AGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGTT  273
V  90.5% (220/243)  IGHV4-39*01  230  ...................G....G...........................G..........---------------------------  292
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                             
D  100.0% (6/6)     IGHD3-16*01  18   -----------------------------------------------------------------......-------------------  23

                                      ------------->                                  
                                      Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2723   274  ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (48/48)   IGHJ4*02     1    ................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_83860

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            361     4e-102
IGHD3-3*01                                                                                            18.0    0.58  
IGHJ5*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGC	TACGATTTT	GGGTCATTGTGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGCTACGATTTTGGGTCATTGTGGTGGTTCGACCCC	ARGRYDFGSLWWFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2724  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-7*01  47   .........................................................G................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  I  I  N  Q  D  G  S  E  A  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2724  91   AGTGGGTGGCCATCATAAACCAAGATGGAAGTGAGGCATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  96.4% (240/249)  IGHV3-7*01  137  ............A......G...............AA..........................................A..........  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                     K  N  S  L  V  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  R  Y  D  F  G  S  
                    Query_2724  181  AGAACTCACTGGTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGGTCGCTACGATTTTGGGTCAT  270
V  96.4% (240/249)  IGHV3-7*01  227  ...........TA.......................................G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD3-3*01  5    --------------------------------------------------------------------------.........-------  13

                                     ---------------->                                  
                                     L  W  W  F  D  P  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_2724  271  TGTGGTGGTTCGACCCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  321
J  97.8% (45/46)    IGHJ5*02    6    -----.........................C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_112299

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           388     5e-110
IGHD1-26*01                                                                                           14.1    10    
IGHJ6*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCATCCGTAATGTCCCCTTAC	AGTGGGA	TCTGCAGCAAAGTGCTACCC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATCCGTAATGTCCCCTTACAGTGGGATCTGCAGCAAAGTGCTACCCCTACGGTATAGGCGTC	ARHP*CPLTVGSAAKCYPYGIGV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	268	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  S  Y
                    Query_2725   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCCGGATACAGCTTTATTAGTTA  90
V  93.1% (268/288)  IGHV5-51*03  6    .....................................................................T.............CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  G  T  R  Y  N  P
                    Query_2725   91   TTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCCGGTGACTCGGGTACCAGATACAACCC  180
V  93.1% (268/288)  IGHV5-51*03  96   C........C.....................................................T........T.A...........G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  M  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  R  G
                    Query_2725   181  GTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACATGTCCATCAGCACCGCCTACCTCCAGTGGAGCAGCCTGAAGGCCTCGGACAGGGG  270
V  93.1% (268/288)  IGHV5-51*03  186  .......C...................A.C.....A.....................G............................CC.C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        M  C  Y  G  A  R  H  P  *  C  P  L  T  V  G  S  A  A  K  C  Y  P  Y  G  I  G  V  W  G  L
                    Query_2725   271  CATGTGTTACGGTGCGAGGCATCCGTAATGTCCCCTTACAGTGGGATCTGCAGCAAAGTGCTACCCCTACGGTATAGGCGTCTGGGGCCT  360
V  93.1% (268/288)  IGHV5-51*03  276  .....A....T.......------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  100.0% (7/7)     IGHD1-26*01  6    ---------------------------------------.......--------------------------------------------  12
J  91.8% (45/49)    IGHJ6*02     14   ------------------------------------------------------------------.........G.A...........A  37

                                                               
                                        G  A  T  V  T  V  S  S 
                    Query_2725   361  AGGGGCCACGGTCACCGTCTCCTCA  385
J  91.8% (45/49)    IGHJ6*02     38   ....A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_83862

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           325     2e-91
IGHD6-19*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAGGGAGT	AGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCC	ARAGSSGWLDS	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  G  D  Y  W  S  W  I  R  K  P  P  G  K  G  L  E 
                    Query_2726   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATAACTGGTGACTACTGGAGCTGGATCCGGAAGCCCCCTGGGAAGGGACTGGAG  90
V  92.6% (226/244)  IGHV4-59*01  49   .............................T........C.G.A..T....................C.......A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  D  Y  N  S  S  L  K  S  R  V  T  I  S  F  D  R  S  K  N 
                    Query_2726   91   TGGATTGGATATATCTATTACAGTGGGAGCACCGACTACAATTCCTCCCTCAAGAGTCGAGTCACCATATCATTTGACAGGTCCAAGAAC  180
V  92.6% (226/244)  IGHV4-59*01  139  ........G........................A.......CC.............................G.A....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  S  S  G  W  L  D  S 
                    Query_2726   181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCC  270
V  92.6% (226/244)  IGHV4-59*01  229  ...............C....C..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-19*01  10   ------------------------------------------------------------------------.........---------  18
J  97.5% (39/40)    IGHJ4*02     7    ----------------------------------------------------------------------------------......A.  14

                                                                      
                                       W  G  Q  G  T  L  V  T  V  S  S
                    Query_2726   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  302
J  97.5% (39/40)    IGHJ4*02     15   ................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_54528

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         313     2e-87
IGHD2-15*01                                                                                           31.5    6e-05
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GGAGAGGGTTGTCGCGCTT	TTGTAGTGCTGGTAGCTGC	GAACTCTC	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGGGAGAGGGTTGTCGCGCTTTTGTAGTGCTGGTAGCTGCGAACTCTCCGGTATGGACGTC	ATGRGLSRFCSAGSCELSGMDV	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	225	25	0	90


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  V  V  S  G  G  S  I  T  S  G  A  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_2727     1    ACCCTGTCCCTCACCTGCGTTGTCTCTGGTGGCTCCATTACCAGTGGGGCTTCCTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  90.0% (225/250)  IGHV4-30-4*01  49   ..................AC..................C.G......T.A..A.....................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  N  I  H  H  S  G  N  T  Y  Y  N  P  S  L  K  S  R  I  T  I  S  I  D  R  S 
                    Query_2727     91   CTGGAGTGGATTGGGAACATCCATCACAGCGGGAACACCTACTACAACCCGTCCCTCAAGAGTCGAATTACCATATCCATAGATAGGTCC  180
V  90.0% (225/250)  IGHV4-30-4*01  139  ...............T.....T..T....T....G...............................G..........AG....C.C....  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------------
                                         K  N  Q  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  R  G  L  S  R  F 
                    Query_2727     181  AAAAACCAGCTCTCCCTGAACCTGAACTCTGTAACAGCCGCGGACACGGCCGTGTATTACTGTGCCACAGGGAGAGGGTTGTCGCGCTTT  270
V  90.0% (225/250)  IGHV4-30-4*01  229  ..G......T..........G....G......G..T.....A.........................G..--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.7% (18/19)    IGHD2-15*01    7    -----------------------------------------------------------------------------------------.  7

                                        --CDR3-IMGT--------------------------->                                 
                                         C  S  A  G  S  C  E  L  S  G  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_2727     271  TGTAGTGCTGGTAGCTGCGAACTCTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  342
D  94.7% (18/19)    IGHD2-15*01    8    .......G..........------------------------------------------------------  25
J  97.8% (45/46)    IGHJ6*02       17   --------------------------..................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_83864

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           321     7e-90
IGHD2-15*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TT	GGATATTGTTTTGGTGG	GAGTTGTTCTGAGGG	CTTAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTGGATATTGTTTTGGTGGGAGTTGTTCTGAGGGCTTAGACTAC	AKVGYCFGGSCSEGLDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  N  F  I  T  Y  G  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_2728   1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCAATTTTATCACTTATGGCATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.2% (227/249)  IGHV3-23*01  47   .......................G............CC....G..GC....C.....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  D  S  A  S  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  S  
                    Query_2728   91   AGTGGGTCTCAGCTATAAGTGGCAGTGGTGATAGCGCATCCTACGCGGACTCCGTGACGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  91.2% (227/249)  IGHV3-23*01  137  ................T.....T.......G....A...A......A..........A...........................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  H  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  V  G  Y  C  F  G  G  
                    Query_2728   181  AAAACACGCTGTATCTGCACATGAACAGCCTGAGACCCGAAGACACGGCCGTATATTATTGTGCGAAAGTTGGATATTGTTTTGGTGGGA  270
V  91.2% (227/249)  IGHV3-23*01  227  .G.................A...............G....G.................C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.2% (15/17)    IGHD2-15*01  2    -----------------------------------------------------------------------.........AG......--  18

                                      GT-------------------->                                  
                                      S  C  S  E  G  L  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_2728   271  GTTGTTCTGAGGGCTTAGACTACTGGGGCCTGGGAACCCTGGTCACCGTGTCCTCAG  327
J  93.2% (41/44)    IGHJ4*02     5    -------------...T.............A..................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_83867

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           408     4e-116
IGHD4-17*01                                                                                           19.9    0.17  
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGAGTC	CGGTGACTAC	GTGATGAGG	GACCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGAGTCCGGTGACTACGTGATGAGGGACCCC	ARGESGDYVMRDP	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  G  S  G  F  S  F  T  T  Y
                    Query_2729   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGGGTTCTGGATTCAGTTTTACCACCTA  90
V  95.2% (275/289)  IGHV5-51*03  6    ..............................................................A...........A...C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  Y  P  S  D  S  D  T  R  Y  S  P
                    Query_2729   91   CTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATATATCCTAGTGACTCTGACACCAGATATAGTCC  180
V  95.2% (275/289)  IGHV5-51*03  96   .......................T.................................C......G..........T........C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  N  S  L  R  A  S  D  S  A
                    Query_2729   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAACAGCCTGAGGGCCTCGGACAGCGC  270
V  95.2% (275/289)  IGHV5-51*03  186  .................................................................G........A...........C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  G  E  S  G  D  Y  V  M  R  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2729   271  CATGTATTATTGTGCGAGAGGGGAGTCCGGTGACTACGTGATGAGGGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  95.2% (275/289)  IGHV5-51*03  276  .........C.........-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD4-17*01  7    ---------------------------..........-------------------------------------------------  16
J  100.0% (40/40)   IGHJ5*02     12   ----------------------------------------------........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_83866

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           434     4e-124
IGHD6-13*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTATCGT	TATGGCAGCAGGTGGT	TACCG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTATCGTTATGGCAGCAGGTGGTTACCGCTTTGACTTC	ARLIVMAAGGYRFDF	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	284	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  T  Y
                    Query_2730   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCACCTA  90
V  97.9% (284/290)  IGHV5-51*01  6    .............................................................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  F  D  T  R  Y  S  P
                    Query_2730   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTTTGATACCAGATATAGCCC  180
V  97.9% (284/290)  IGHV5-51*01  96   .......................................................................C............C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2730   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (284/290)  IGHV5-51*01  186  .....................................................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  A  R  L  I  V  M  A  A  G  G  Y  R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2730   271  CATCTATTACTGTGCGAGACTTATCGTTATGGCAGCAGGTGGTTACCGCTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  97.9% (284/290)  IGHV5-51*01  276  ...G................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  87.5% (14/16)    IGHD6-13*01  4    ---------------------------...A.......C....-----------------------------------------------  19
J  97.7% (43/44)    IGHJ4*02     5    ------------------------------------------------........A.................................  46

                                        
                                        
                    Query_2730   361  AG  362
J  97.7% (43/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_291762

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           353     1e-99
IGHD3-22*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCAC	ARAPPFDYDLDVRGIHNFDH	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	235	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2731   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (235/244)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_2731   91   TGGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAGC  180
V  96.3% (235/244)  IGHV4-59*01  139  ..........A.................G.............................................A.............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  A  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D 
                    Query_2731   181  CAGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGCCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGAC  270
V  96.3% (235/244)  IGHV4-59*01  229  ..................AG..........................TG................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-22*01  6    ----------------------------------------------------------------------------........------  13

                                      GT------------------------>                                  
                                       V  R  G  I  H  N  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2731   271  GTAAGGGGAATCCACAACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  97.8% (44/45)    IGHJ4*02     4    ----------------........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_306183

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2732   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_2732   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_2732   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_2732   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_291761

Length=431
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           316     2e-88
IGHD6-13*01                                                                                           31.5    7e-05
IGHJ6*02                                                                                              79.5    5e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCCATCCCGAGGAGG	TAGCAGCAGCTGGTAC	CGAAAGGGGC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCCATCCCGAGGAGGTAGCAGCAGCTGGTACCGAAAGGGGCACTTCTACGCAATGGATGTC	ASPSRGGSSSWYRKGHFYAMDV	310	375	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	67	4	0	94.4
CDR1-IMGT	76	120	45	20	4	21	44.4
FR2-IMGT	121	171	51	47	4	0	92.2
CDR2-IMGT	172	195	24	16	8	0	66.7
FR3-IMGT	196	309	114	103	11	0	90.4
CDR3-IMGT (germline)	310	314	5	5	0	0	100
Total	N/A	N/A	310	258	31	21	83.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-----------------C
                                         Q  L  V  Q  S  G  A  E  V  T  K  P  G  S  S  V  K  I  S  C  K  S  S  G  G  T  F  R  S  
                    Query_2733   5    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGACGAAGCCTGGGTCCTCGGTGAAGATCTCCTGCAAGTCTTCTGGAGGCACCTTCAGGTCTT  94
V  83.2% (258/310)  IGHV1-69*01  5    ...................G..........A......................G...........G...................C----  90
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S     

                                      DR1-IMGT-----------------><--------------------FR2-IMGT---------------------><-------CDR2-
                                      S  G  Y  T  F  G  T  Y  A  M  T  W  V  R  Q  A  P  G  Q  G  L  E  W  I  G  G  I  I  A  I  
                    Query_2733   95   CTGGATACACCTTCGGAACTTATGCCATGACCTGGGTGCGACAGGCCCCTGGACAAGGGCTCGAGTGGATAGGAGGGATCATCGCCATCG  184
V  83.2% (258/310)  IGHV1-69*01  91   -----------------.GC.....T..C.G..............................T........G............C.T...T  163
                                                        S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  

                                      IMGT------><----------------------------------------------------FR3-IMGT------------------
                                      A  G  I  I  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  A  S  T  G  Y  L  E  V  S  
                    Query_2733   185  CTGGTATAATCAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCGGCGAGTACAGGCTACTTGGAGGTGAGCA  274
V  83.2% (258/310)  IGHV1-69*01  164  T.....C.GCA..................................................CA....C....C....A.....C......  253
                                      F  G  T  A  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  

                                      ----------------------------------><----------------------------CDR3-IMGT-----------------
                                      S  L  N  S  E  D  T  A  V  Y  Y  C  A  S  P  S  R  G  G  S  S  S  W  Y  R  K  G  H  F  Y  
                    Query_2733   275  GTCTCAACTCTGAGGACACGGCCGTCTATTACTGTGCGAGCCCATCCCGAGGAGGTAGCAGCAGCTGGTACCGAAAGGGGCACTTCTACG  364
V  83.2% (258/310)  IGHV1-69*01  254  .C..G.GA.................G..............--------------------------------------------------  293
                                      S  L  R  S  E  D  T  A  V  Y  Y  C  A                                                     
D  100.0% (16/16)   IGHD6-13*01  6    -------------------------------------------------------................-------------------  21
J  92.5% (49/53)    IGHJ6*02     10   ---------------------------------------------------------------------------------...A.....  18

                                      ---------->                                 
                                      A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2733   365  CAATGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  408
J  92.5% (49/53)    IGHJ6*02     19   GT.....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 42392376


Query= Query_291766

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           363     2e-102
IGHD6-19*01                                                                                           14.1    9.8   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGGCAGGAATTTCTTCCAGCGCC	GGCTGGT	CCGGACC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGGCAGGAATTTCTTCCAGCGCCGGCTGGTCCGGACCCTTTGACTAC	ARWAGISSSAGWSGPFDY	289	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	46	5	0	90.2
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	100	14	0	87.7
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	294	263	31	0	89.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_2734   1    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCGGGAGGCACCTTCAGC  90
V  89.5% (263/294)  IGHV1-69*01  1    .....G.................G...............................................T..T...............  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  H  P  F  S  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  M  I  V  P  K  F  G  T  A  R  T 
                    Query_2734   91   AGTCACCCTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGCCCTGAGTGGATGGGAATGATCGTCCCTAAATTTGGCACAGCAAGGACC  180
V  89.5% (263/294)  IGHV1-69*01  91   ..CT.TG..A...............................G.T.............GG....A......TC.....T.......ACTA.  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  R  F  Q  D  R  V  T  I  T  A  D  E  S  T  S  T  I  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_2734   181  GCACAGAGGTTCCAGGACAGAGTCACGATTACCGCGGACGAATCCACGAGCACAATTTATATGGAGTTGAGCAGCCTGAGATCTGAGGAC  270
V  89.5% (263/294)  IGHV1-69*01  181  .......A........G.....................................GCC..C......C.......................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       P  A  V  Y  F  C  A  R  W  A  G  I  S  S  S  A  G  W  S  G  P  F  D  Y  W  G  Q  G  T  L 
                    Query_2734   271  CCGGCCGTCTATTTCTGTGCGAGATGGGCAGGAATTTCTTCCAGCGCCGGCTGGTCCGGACCCTTTGACTACTGGGGCCAGGGAACCCTG  360
V  89.5% (263/294)  IGHV1-69*01  271  A.......G....A..........------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD6-19*01  13   ------------------------------------------------.......-----------------------------------  19
J  97.7% (43/44)    IGHJ4*02     5    --------------------------------------------------------------............................  32

                                                      
                                       V  T  V  S  A  
                    Query_2734   361  GTCACCGTCTCCGCAG  376
J  97.7% (43/44)    IGHJ4*02     33   ............T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_306184

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           406     1e-115
IGHD1-26*01                                                                                           10.3    132   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATAGATCTCACGTGGGGCTACTTTGACTAC	AIDLTWGYFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_2735   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  94.8% (275/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  F  A  Q 
                    Query_2735   92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTTTGCACAG  181
V  94.8% (275/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_2735   182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (275/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  I  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  A  V  S  S  
                    Query_2735   272  ATATATTACTGTGCGATAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCGCCGTCTCCTCAG  350
V  94.8% (275/290)  IGHV1-18*01  277  G.G.............G...-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  95.7% (45/47)    IGHJ4*02     2    --------------------------------..........................C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_291765

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            419     2e-119
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	272	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	49	49	49	0	0	100
CDR1-IMGT	50	79	30	26	4	0	86.7
FR2-IMGT	80	130	51	51	0	0	100
CDR2-IMGT	131	157	27	27	0	0	100
FR3-IMGT	158	271	114	113	1	0	99.1
CDR3-IMGT (germline)	272	278	7	7	0	0	100
Total	N/A	N/A	278	273	5	0	98.2


Alignments

                                     <-------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><----------
                                       G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  I
                    Query_2736  1    AGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGAT  90
V  98.2% (273/278)  IGHV6-1*01  27   ..........................................................G......G....AG..................  116
                                       G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I

                                     ----------FR2-IMGT---------------------><--------CDR2-IMGT--------><----------------------
                                       R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S
                    Query_2736  91   CAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAG  180
V  98.2% (273/278)  IGHV6-1*01  117  ..........................................................................................  206
                                       R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S

                                     ------------------------------FR3-IMGT----------------------------------------------------
                                       R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C
                    Query_2736  181  TCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTG  270
V  98.2% (273/278)  IGHV6-1*01  207  .............A............................................................................  296
                                       R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C

                                     ><----------CDR3-IMGT--------->                                  
                                       A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2736  271  TGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  335
V  98.2% (273/278)  IGHV6-1*01  297  ........---------------------------------------------------------  304
                                       A  R                                                           
J  97.9% (46/47)    IGHJ3*02    4    ------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_306189

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           290     2e-80
IGHD2-21*01                                                                                           12.2    31   
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGATCGGCTCC	GGTGAT	GGGATTCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGATCGGCTCCGGTGATGGGATTCGTTTTGACTCC	AKGIGSGDGIRFDS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	217	32	0	87.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  V  M  A  W  V  R  H  V  P  G  K  G  L  
                    Query_2737   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCAGGATTCACCTTCAGCAGCTATGTCATGGCCTGGGTCCGACACGTTCCAGGGAAGGGGCTGG  90
V  87.1% (217/249)  IGHV3-23*01  47   ......................A.....T...........T..........C....AG.........C..G.C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  R  G  G  A  A  P  S  T  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_2737   91   AGTGGGTCTCAAGCATTAGTGGACGTGGTGGTGCTGCACCCTCCACAGACTCCGTGAAGGGCCGCTTCAGCATCTCCAGAGACAATTCCG  180
V  87.1% (217/249)  IGHV3-23*01  137  ...........GCT........TA........AGCA..TA..A.G...................G....C...................A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      E  N  T  L  H  L  Q  M  N  S  L  R  V  E  D  T  A  T  Y  Y  C  A  K  G  I  G  S  G  D  G  
                    Query_2737   181  AAAACACCCTGCATCTACAAATGAACAGCCTGAGAGTCGAGGACACGGCCACATATTACTGTGCGAAAGGGATCGGCTCCGGTGATGGGA  270
V  87.1% (217/249)  IGHV3-23*01  227  .G.....G...T....G...................C.............GT.................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-21*01  14   --------------------------------------------------------------------------------......----  19

                                      ------------->                             
                                      I  R  F  D  S  W  G  Q  G  A  L  V  I  V  S
                    Query_2737   271  TTCGTTTTGACTCCTGGGGCCAGGGAGCCCTGGTCATCGTCTC  313
J  92.1% (35/38)    IGHJ4*02     6    -----.......A.............A.........C......  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_306188

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            338     5e-95
IGHD3-16*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TTGGCCCCGGATTCAGATATATGGGG	TTGGGGGAG	N/A	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATATTGGCCCCGGATTCAGATATATGGGGTTGGGGGAGTAC	ARDIGPGFRYMGLGEY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	252	10	9	1	0	90
Total	N/A	N/A	252	234	18	0	92.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  D  Y  A  M  H  W  F  R  Q  V  P  G  K  G  L  
                    Query_2738   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGAAGATTATGCCATGCATTGGTTCCGGCAAGTTCCAGGGAAGGGCCTGG  90
V  92.9% (234/252)  IGHV3-9*01   47   ...........................................T..............C...G.........C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  S  S  T  K  I  G  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2738   91   AATGGGTCTCAGGTATTAATTGGAGTAGTACTAAAATAGGCTATGCGGACGCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.9% (234/252)  IGHV3-9*01   137  .G................G.....A....GG..GC...............T.......................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  K  S  L  Y  V  Q  M  N  N  L  R  P  E  D  T  A  L  Y  Y  C  A  R  D  I  G  P  G  F  R  
                    Query_2738   181  AGAAGTCCCTGTATGTACAAATGAACAATCTGAGACCTGAGGACACGGCCTTGTATTACTGTGCAAGAGATATTGGCCCCGGATTCAGAT  270
V  92.9% (234/252)  IGHV3-9*01   227  ....C.........C.G..........G.......G..............................A.....------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                      T------------------>                                  
                                      Y  M  G  L  G  E  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_2738   271  ATATGGGGTTGGGGGAGTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  324
D  100.0% (9/9)     IGHD3-16*01  16   --------.........-------------------------------------  24
J  97.3% (36/37)    IGHJ4*02     12   -----------------................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_291768

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           330     1e-92
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGACTAC	AG	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGACTACAGCAATTGGGTCGACCCC	ARDSGDYSNWVDP	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	231	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  V  S  S  G  S  Y  Y  W  T  W  I  W  Q  P  P  G  K  G 
                    Query_2739   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCGTCAGTAGTGGTAGTTACTACTGGACCTGGATCTGGCAGCCCCCAGGGAAGGGG  90
V  92.0% (231/251)  IGHV4-61*01  49   ...................C...........G.........C...................G.......C...................A  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  G  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2739   91   CTGGAGTGGATTGGTTATATCTATAACGGAGGGAGCACCAATTATAATCCCTCCCTCAAAAGTCGAGTCACCATATCAGTAGACACATCC  180
V  92.0% (231/251)  IGHV4-61*01  139  ..............G.........T..A.T...........C..C..C...........G..........................G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  S  G  D  Y  S  N 
                    Query_2739   181  AAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCATATATTATTGTGCGAGAGATTCCGGTGACTACAGCAAT  270
V  92.0% (231/251)  IGHV4-61*01  229  .....................C...G.........................G.G.....C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (10/10)   IGHD4-17*01  7    --------------------------------------------------------------------------..........------  16
J  94.0% (47/50)    IGHJ5*02     2    --------------------------------------------------------------------------------------...C  5

                                      ----------->                                  
                                       W  V  D  P  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_2739   271  TGGGTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  316
J  94.0% (47/50)    IGHJ5*02     6    ...T......................................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_291769

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           357     1e-100
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GGGATCAAGAGG	TGATAGTAGTGATGATTAC	AGTGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGGGATCAAGAGGTGATAGTAGTGATGATTACAGTGGTGCTTTTGATATT	RKRDQEVIVVMITVVLLI	242	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	29	28	0	1	96.6
CDR1-IMGT	29	52	24	23	1	0	95.8
FR2-IMGT	53	103	51	51	0	0	100
CDR2-IMGT	104	127	24	23	1	0	95.8
FR3-IMGT	128	241	114	108	6	0	94.7
CDR3-IMGT (germline)	242	249	8	8	0	0	100
Total	N/A	N/A	250	241	8	1	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L   P  V  Q  P  L  D  S  P  S  V  V  M  A  C  T  G  S  A  R  L  Q  A  R  G  W 
                    Query_2740   1    GGTCCCTGAGACT-TCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  89
V  96.4% (241/250)  IGHV3-30*18  47   .............C................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       S  G  W  Q  L  Y  H  M  M  E  I  I  N  I  L  Q  T  P  *  R  A  D  S  P  F  P  E  T  I  P 
                    Query_2740   90   AGTGGGTGGCAGTTATATCATATGATGGAAATAATAAATATTCTGCAGACTCCGTGAAGGGCCGACTCACCATTTCCAGAGACAATTCCA  179
V  96.4% (241/250)  IGHV3-30*18  137  ..............................G.........C.A......................T.......C................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                       R  T  R  C  I  C  R  *  T  A  *  E  L  R  T  R  L  C  I  T  V  R  K  R  D  Q  E  V  I  V 
                    Query_2740   180  AGAACACGCTGTATCTGCAGATGAACAGCCTGAGAGTTGAGGACACGGCTGTGTATTACTGTGCGAAAGAGGGATCAAGAGGTGATAGTA  269
V  96.4% (241/250)  IGHV3-30*18  227  ...................A................C.................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  89.5% (17/19)    IGHD3-22*01  10   ----------------------------------------------------------------------------------........  17

                                      -IMGT----------------------->                                  
                                       V  M  I  T  V  V  L  L  I  F  G  A  K  G  Q  W  S  P  S  L  Q 
                    Query_2740   270  GTGATGATTACAGTGGTGCTTTTGATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  332
D  89.5% (17/19)    IGHD3-22*01  18   ...G.T.....----------------------------------------------------  28
J  97.9% (46/47)    IGHJ3*02     4    ----------------............C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_227019

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD3-3*01                                                                                            23.8    0.011
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCAATCGAGGC	TTTTGGAGTGGT	CGGGGGCCCCTTATCGC	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCAATCGAGGCTTTTGGAGTGGTCGGGGGCCCCTTATCGCTACTTCGATCTC	AREQSRLLEWSGAPYRYFDL	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_2741   1    ACCCTGTCCCTCACCTGCACTGTCTCGGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATTCGGCAGGCCCCAGGGAAGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   ..........................T...................................C......C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  Y  S  R  G  R  T  N  Y  N  P  A  L  T  T  R  V  T  I  S  A  D  S  S  K  N 
                    Query_2741   91   TGGATTGGATATTTCTATAGCAGAGGCAGGACGAACTACAACCCCGCCCTCACGACTCGAGTCACCATATCAGCAGACTCGTCCAAGAAC  180
V  92.2% (226/245)  IGHV4-59*01  139  ........G...A.....TA...T..G..C..C............T......A..G.................T....A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  Q  S  R  L  L  E  W  S 
                    Query_2741   181  CAGTTCTCCCTGAAGCTCAGCTCTGTTACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGAGCAATCGAGGCTTTTGGAGTGGTCG  270
V  92.2% (226/245)  IGHV4-59*01  229  .................G........G....................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD3-3*01   11   ----------------------------------------------------------------------------............--  22

                                      GT------------------------>                                  
                                       G  A  P  Y  R  Y  F  D  L  W  G  R  G  T  Q  V  T  V  S  S  
                    Query_2741   271  GGGGCCCCTTATCGCTACTTCGATCTCTGGGGCCGTGGCACCCAGGTCACTGTCTCCTCAG  331
J  97.8% (45/46)    IGHJ2*01     8    ---------------............................T.................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_49695

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           321     7e-90
IGHD6-13*01                                                                                           10.3    125  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	T	CAGCA	CCGGCGCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCGGCGCATACTACTTTGACTTC	ARVSTGAYYFDF	261	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	20	4	0	83.3
FR2-IMGT	75	125	51	44	7	0	86.3
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	100	14	0	87.7
CDR3-IMGT (germline)	261	267	7	6	1	0	85.7
Total	N/A	N/A	267	236	31	0	88.4


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  
                    Query_2742   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGAC  90
V  88.4% (236/267)  IGHV4-59*01  26   ................T.......................................T........A.....T.C.........A....G.  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  
                    Query_2742   91   AACCCCCAGGAAAGGGACTGGAGTGGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCA  180
V  88.4% (236/267)  IGHV4-59*01  116  .G........G...................GGT....C...........G.G..C...C................A..G...........  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      M  S  F  D  T  S  K  R  Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  
                    Query_2742   181  TGTCCTTTGACACGTCCAAGAGGCAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCA  270
V  88.4% (236/267)  IGHV4-59*01  206  .A..AG.A.............AC.............A....AGC..........................G............A...---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     
D  100.0% (5/5)     IGHD6-13*01  9    ----------------------------------------------------------------------------------------..  10

                                      ----CDR3-IMGT------------>                                
                                      S  T  G  A  Y  Y  F  D  F  W  G  R  G  T  L  V  V  V  S  S
                    Query_2742   271  GCACCGGCGCATACTACTTTGACTTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  328
D  100.0% (5/5)     IGHD6-13*01  11   ...-------------------------------------------------------  13
J  91.3% (42/46)    IGHJ4*02     1    ------------............A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_49697

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           305     3e-85
IGHD6-13*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACTGG	GCAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACTGGGCAGCAGCTGACTGACTAC	ARDTGQQLTDY	276	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	275	147	110	4	33	74.8
CDR3-IMGT (germline)	276	283	8	8	0	0	100
Total	N/A	N/A	283	241	9	33	85.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2743   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  85.2% (241/283)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  D  S  P  R  Y  Y  A  D  S  V  K  G  R  F  T  Y  Y  A  D  S  V  
                    Query_2743   91   AGTGGGTCTCATCCATTAGTAGTAGTGATAGTCCCAGATATTACGCAGACTCAGTGAAGGGCCGATTCACCTATTATGCAGACTCAGTGA  180
V  85.2% (241/283)  IGHV3-21*01  137  ..........................AG....TA..T...C...---------------------------------.............  193
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y                                   A  D  S  V  

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                      K  G  R  F  T  I  S  R  D  D  A  K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  
                    Query_2743   181  AGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATT  270
V  85.2% (241/283)  IGHV3-21*01  194  ..........................A..........C...............................C....................  283
                                      K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-----------CDR3-IMGT----------->                                  
                                      Y  C  A  R  D  T  G  Q  Q  L  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2743   271  ACTGTGCGAGAGATACTGGGCAGCAGCTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
V  85.2% (241/283)  IGHV3-21*01  284  .............-----------------------------------------------------------  296
                                      Y  C  A  R                                                              
D  100.0% (10/10)   IGHD6-13*01  8    -------------------..........-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_49690

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           263     1e-72
IGHD2-15*01                                                                                           12.2    32   
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TGGTGG	CGGACGGGGGCTCGATTGGGGTGCGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTGGCGGACGGGGGCTCGATTGGGGTGCGGTGGTTCGACACC	ARLVADGGSIGVRWFDT	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	96	18	0	84.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	206	38	0	84.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  I  R  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  T  L  E 
                    Query_2744   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGCCTCCATTAGAAGTTATTACTGGAGTTGGGTTCGCCAGCCCCCCGGCAAGACACTGGAG  90
V  84.4% (206/244)  IGHV4-59*08  49   ...................C...........G......C..T.....C........C...A.C..G........A..G...GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  F  H  T  G  T  T  N  Y  H  P  S  L  K  S  R  V  T  I  S  S  D  T  S  K  N 
                    Query_2744   91   TGGATTGGCTATTTCTTTCACACCGGGACCACCAATTACCATCCCTCCCTCAAGAGTCGAGTCACCATTTCATCAGACACGTCCAAGAAC  180
V  84.4% (206/244)  IGHV4-59*08  139  ........G...A...A.T...GT....G......C...A.C..........................A...GT................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       I  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  V  A  D  G  G  S  I  G 
                    Query_2744   181  ATCTTCTCATTGACTCTGACGTCTGTGACCGCCGCAGACACGGCCGTCTATTTTTGTGCGAGACTGGTGGCGGACGGGGGCTCGATTGGG  270
V  84.4% (206/244)  IGHV4-59*08  229  CAG.....CC...AG....GC..........................G....AC..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-15*01  13   ----------------------------------------------------------------......--------------------  18

                                      ----------------->                                  
                                       V  R  W  F  D  T  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_2744   271  GTGCGGTGGTTCGACACCTGGGGCCAGGGAACGCTGGTCAGCGTCTCATCAG  322
J  91.3% (42/46)    IGHJ5*02     6    ------.........C................C.......C......C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_49691

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         316     2e-88
IGHD2-15*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTCTTG	GCTACTC	TTCCTGGAGT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCTTGGCTACTCTTCCTGGAGTCTACGGTATGGACGTC	ARVLATLPGVYGMDV	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	102	12	0	89.5
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	224	22	0	91.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  V  V  S  G  Y  S  I  S  S  G  S  F  W  A  W  I  R  Q  T  P  G  K  G  L 
                    Query_2745     1    ACCCTGTCCCTCACCTGCGTAGTCTCTGGTTACTCCATCAGCAGTGGTTCCTTCTGGGCCTGGATCCGGCAGACCCCAGGGAAGGGGCTG  90
V  91.1% (224/246)  IGHV4-38-2*01  49   ...................CT............................A..A.....G.............C.................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  V  S  H  S  G  N  S  Y  Y  N  P  S  L  R  S  R  V  T  L  Q  V  D  T  S  K 
                    Query_2745     91   GAGTGGATTGGGAGTGTCTCTCATAGTGGGAACTCCTACTACAATCCGTCCCTCAGGAGTCGAGTCACCCTACAAGTAGACACGTCCAAA  180
V  91.1% (224/246)  IGHV4-38-2*01  139  ...............A...A...........G.A..........C..........A.............A..TC...............G  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                         N  H  F  S  L  S  L  S  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  V  L  A  T  L  P  G  V 
                    Query_2745     181  AACCACTTCTCCCTGAGCCTGAGTTCTGTGACCGCCGCAGACACGGCCGTTTTTTACTGTGCGAGAGTCTTGGCTACTCTTCCTGGAGTC  270
V  91.1% (224/246)  IGHV4-38-2*01  229  .....G..........AG.....C..........................G.A.............------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD2-15*01    24   ------------------------------------------------------------------------.......-----------  30
J  100.0% (49/49)   IGHJ6*02       14   -----------------------------------------------------------------------------------------.  14

                                        -------------->                                 
                                         Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2745     271  TACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  100.0% (49/49)   IGHJ6*02       15   ................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_49693

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           363     1e-102
IGHD1-1*01                                                                                            12.2    32    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTAC	AEEKRRVPRGTFHY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2746   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-23*01  47   ................................T.........G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  G  G  G  S  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  
                    Query_2746   91   AGTGGGTCTCAGCCATTAGTGGTGGTGGTGGTAGCACATACTTCGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGA  180
V  96.4% (241/250)  IGHV3-23*01  137  .............T.........A..................A...................................G.........C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  
                    Query_2746   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGG  270
V  96.4% (241/250)  IGHV3-23*01  227  .................................................................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------------------------......------------  17

                                      ------------->                                  
                                      G  T  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2746   271  GAACCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (43/44)    IGHJ4*02     5    ----....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_227011

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           364     6e-103
IGHJ3*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TCTTCATCCGAGGGGTCCGGCCCCC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTCATCCGAGGGGTCCGGCCCCCGATGCTTTTGACATT	ARDLHPRGPAPDAFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	262	29	0	90


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  I  S  C  K  A  S  G  Y  T  F  T  K  Y
                    Query_2747   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCATCTGGATACACCTTCACCAAATA  90
V  90.0% (262/291)  IGHV1-46*01  6    ..................G.................................G.................................GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  L  H  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  L  I  N  P  S  G  G  I  T  A  Y  A  Q
                    Query_2747   91   CTATCTTCACTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGTTGGGATTAATAAACCCTAGTGGTGGTATCACGGCGTACGCACA  180
V  90.0% (262/291)  IGHV1-46*01  96   ....A.G.............................G.........A.....A....C................G...AAGC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  L  T  M  S  R  D  T  S  T  S  T  V  Y  I  D  L  S  S  L  T  S  A  D  T  A
                    Query_2747   181  GAAGTTCCAGGGAAGACTCACCATGAGCAGGGACACGTCCACTTCTACAGTCTACATCGACCTGAGCAGCCTGACCTCTGCGGACACGGC  270
V  90.0% (262/291)  IGHV1-46*01  186  ............C...G.........C...............GAGC...........G..G.............GA....A.........  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  D  L  H  P  R  G  P  A  P  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S
                    Query_2747   271  CGTATACTACTGTGCGAGAGATCTTCATCCGAGGGGTCCGGCCCCCGATGCTTTTGACATTTGGGGCCAAGGGACAATGGTCACCGTCTC  360
V  90.0% (262/291)  IGHV1-46*01  276  ...G..T..............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
J  95.9% (47/49)    IGHJ3*02     2    ----------------------------------------------...........T..C.............................  45

                                           
                                        S  
                    Query_2747   361  TTCAG  365
J  95.9% (47/49)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_227010

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           262     4e-72
IGHD2-15*01                                                                                           10.3    119  
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	ACATAATCCT	GCTGC	CAGAGGGGC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGACATAATCCTGCTGCCAGAGGGGCCAACTGGTTCGACCTC	ARGHNPAARGANWFDL	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	48	24	19	2	3	79.2
FR2-IMGT	49	99	51	45	6	0	88.2
CDR2-IMGT	100	120	21	18	3	0	85.7
FR3-IMGT	121	234	114	95	19	0	83.3
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	245	208	34	3	84.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  D  F  Y  G  G  S  F     D  S  Y  W  N  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_2748   1    ACCCTGTCCCTCACCTGCGATTTTTATGGTGGGTCCTT---TGATTCCTACTGGAATTGGATCCGCCAGACTCCAGGGAAGGGGCTGGAG  87
V  84.9% (208/245)  IGHV4-34*01  49   ...................C.G.C..............CAG..G..A........GC............C.C..................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  N  R  A  G  S  T  N  F  N  P  S  L  E  S  R  L  T  I  S  V  D  T  S  T  K 
                    Query_2748   88   TGGATTGCAGAAATCAATCGTGCTGGAAGCACCAACTTCAATCCGTCCCTCGAGAGTCGACTCACCATTTCAGTGGACACGTCCACGAAG  177
V  84.9% (208/245)  IGHV4-34*01  139  .......GG..........A.AG..............A...C.........A........G.......A.....A..........A...C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       R  F  S  L  R  L  N  S  L  N  A  A  D  T  G  V  Y  Y  C  A  R  G  H  N  P  A  A  R  G  A 
                    Query_2748   178  CGATTCTCCCTGAGGCTAAATTCTCTTAACGCCGCAGACACGGGTGTGTATTACTGTGCGCGAGGACATAATCCTGCTGCCAGAGGGGCC  267
V  84.9% (208/245)  IGHV4-34*01  229  .AG..........A...G.GC...G.G.C......G.......C................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (5/5)     IGHD2-15*01  21   ---------------------------------------------------------------------------.....----------  25
J  96.0% (48/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  D  L  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_2748   268  AACTGGTTCGACCTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  316
J  96.0% (48/50)    IGHJ5*02     3    .............C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_227013

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           336     1e-94
IGHD3-10*01                                                                                           10.3    117  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  V  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_2749   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACGTGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-21*01  47   ............................................AG.....G.A..A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  E  Y  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_2749   91   AGTGGGTCTCATCCATTAGTAGTACTAGTGAATACATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  93.2% (232/249)  IGHV3-21*01  137  ........................G....AGT........C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_2749   181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTT  270
V  93.2% (232/249)  IGHV3-21*01  227  ............A......A..............................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2749   271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_49698

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         358     4e-101
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CATGGA	GGTCCGGGGAATTA	CCAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACATGGAGGTCCGGGGAATTACCAGTTTGACTAC	ARHGGPGNYQFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	259	30	0	89.6


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  D  T  K
                    Query_2750     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAGGATCTCCTGTAAGGCTTCTGGATACAGTTTTGACACCAA  90
V  89.6% (259/289)  IGHV5-10-1*01  6    ..............................A........G.........................G............C...AC..G.T.  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  H  Y  N  S
                    Query_2750     91   GTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATAGATCCCAGTGACTCTTATACCCATTACAACTC  180
V  89.6% (259/289)  IGHV5-10-1*01  96   C.......G................................................T.....T...............A.C....G.C.  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  V  D  R  S  T  T  T  A  Y  M  Q  W  T  S  L  E  A  S  D  S  G
                    Query_2750     181  GTCCTTCCAAGGACACGTCACCATCTCGGTTGACAGGTCCACCACCACTGCCTACATGCAGTGGACCAGCCTGGAGGCCTCGGACAGCGG  270
V  89.6% (259/289)  IGHV5-10-1*01  186  ............C..............A.C.....A.....T..G..........C.........G.......A............C..C  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          I  Y  F  C  A  R  H  G  G  P  G  N  Y  Q  F  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_2750     271  CATTTATTTCTGTGCGCGACATGGAGGTCCGGGGAATTACCAGTTTGACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  356
V  89.6% (259/289)  IGHV5-10-1*01  276  ...G....A.......A..-------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                    
D  85.7% (12/14)    IGHD3-10*01    11   -------------------------...T......G...-----------------------------------------------  24
J  97.7% (42/43)    IGHJ4*02       6    -------------------------------------------.........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_227014

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           371     6e-105
IGHD3-9*01                                                                                            14.1    8.4   
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-9*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCTACG	TTTTGGCTGG	GAGAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTACGTTTTGGCTGGGAGAATGATGCACTTGATATC	ARHLRFGWENDALDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_2751   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  97.2% (244/251)  IGHV4-39*01  49   .........................................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2751   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACGACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCCGTTGACACGTCC  180
V  97.2% (244/251)  IGHV4-39*01  139  ..........................................T...............................A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  R  F  G  W  E 
                    Query_2751   181  AAGAATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGACATCTACGTTTTGGCTGGGAG  270
V  97.2% (244/251)  IGHV4-39*01  229  .....C.............A.......................................C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-9*01   12   -----------------------------------------------------------------------------.....A....---  21

                                      ----------------->                                  
                                       N  D  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2751   271  AATGATGCACTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  96.0% (48/50)    IGHJ3*02     1    --......TT..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_227017

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           277     1e-76
IGHD3-16*02                                                                                           27.6    9e-04
IGHJ3*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	ARGLLIEDPNYVWGSFRRNHNCYTV	261	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	40	11	0	78.4
CDR2-IMGT	126	146	21	16	5	0	76.2
FR3-IMGT	147	260	114	92	22	0	80.7
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	222	45	0	83.1


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  
                    Query_2752   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCACTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGC  90
V  83.1% (222/267)  IGHV4-59*01  26   ................T..............C.........A....C.......G.......A...G..........AG....A.C....  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  R  R  L  E  W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  
                    Query_2752   91   AGCCTCCAGGGAGGAGACTGGAGTGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCC  180
V  83.1% (222/267)  IGHV4-59*01  116  ....C.......A.G...........A....G.ATA...AT.A..G..........A..............C...A......A......A  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      L  S  G  D  M  S  R  N  Q  L  S  L  N  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  
                    Query_2752   181  TGTCAGGAGACATGTCTAGGAATCAGTTGTCTCTCAACCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTC  270
V  83.1% (222/267)  IGHV4-59*01  206  .A....T.....C...C.A...C.....C..C..G..G....G.TCT.....................GT.....A...........---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -----------------------CDR3-IMGT-------------------------------->                         
                                      L  L  I  E  D  P  N  Y  V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  Q  G  T  P  V  T  
                    Query_2752   271  TTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCAAGGGACACCGGTCACCG  360
D  94.1% (16/17)    IGHD3-16*02  14   -----------------------.............A...--------------------------------------------------  30
J  94.7% (36/38)    IGHJ3*01     13   -------------------------------------------------------------...................AT........  41

                                               
                                      V  S  S  
                    Query_2752   361  TCTCTTCAG  369
J  94.7% (36/38)    IGHJ3*01     42   .........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_227016

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           302     3e-84
IGHD1-26*01                                                                                           14.1    8.8  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTATTGCGATG	AGTGGGA	CTCGGTTTTCGAGTCGGGCTGCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTATTGCGATGAGTGGGACTCGGTTTTCGAGTCGGGCTGCCCTTGACTAC	ARGLIAMSGTRFSSRAALDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	221	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  I  D  F  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2753   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTATCGACTTCGCCCTGAGTTGGGTCCGACAGGCTCCAGGGAAGGGACTAC  90
V  88.8% (221/249)  IGHV3-23*01  47   ..........................................G.AG..AT...A....C........C.................G..GG  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  T  I  S  G  S  G  R  G  T  S  T  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2753   91   AGTGGGTCTCAACTATCAGTGGTAGTGGTCGTGGGACCTCCACCGCGGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  88.8% (221/249)  IGHV3-23*01  137  ...........G....T............G..A.C..A.A.TA...A......................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  I  L  Y  L  Q  M  D  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  G  L  I  A  M  S  G  
                    Query_2753   181  AGAACATTCTGTACCTGCAAATGGACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAGAGGTCTTATTGCGATGAGTGGGA  270
V  88.8% (221/249)  IGHV3-23*01  227  ......CG.....T.........A................G.........................A..---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD1-26*01  6    -----------------------------------------------------------------------------------.......  12

                                      R3-IMGT------------------------>                                  
                                      T  R  F  S  S  R  A  A  L  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2753   271  CTCGGTTTTCGAGTCGGGCTGCCCTTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  336
J  97.6% (41/42)    IGHJ4*02     7    ------------------------...............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_317231

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	TCCTCC	GGGTATATCAGTGGCTGG	GACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGATCCTCCGGGTATATCAGTGGCTGGGACGACTACAACGCTATGGACGTC	AGSSGYISGWDDYNAMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	288	275	13	0	95.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T  S  Y 
                    Query_2754   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAACCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACATCTTTACCAGCTAT  91
V  95.5% (275/288)  IGHV1-18*01  7    ................................G...........................................C.............  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  S  Y  N  G  N  T  N  Y  A  E 
                    Query_2754   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCAGTTACAATGGTAACACAAACTATGCAGAA  181
V  95.5% (275/288)  IGHV1-18*01  97   ............................................................GC.........................C.G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  F  Q  G  R  V  T  L  T  T  D  T  A  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_2754   182  AACTTCCAGGGCAGAGTCACCCTGACCACAGACACAGCCACGAGCACAGCCTACATGGAGCTCAGGAGCCTAAGATCTGACGACACGGCC  271
V  95.5% (275/288)  IGHV1-18*01  187  ..GC.................A..............T.........................G........G..................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  G  S  S  G  Y  I  S  G  W  D  D  Y  N  A  M  D  V  W  G  Q  G  T  T  V  P 
                    Query_2754   272  GTGTATTACTGTGCGGGATCCTCCGGGTATATCAGTGGCTGGGACGACTACAACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCCCC  361
V  95.5% (275/288)  IGHV1-18*01  277  ...............A..------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  94.4% (17/18)    IGHD6-19*01  1    ------------------------.......G..........------------------------------------------------  18
J  94.3% (50/53)    IGHJ6*02     10   ----------------------------------------------.....T...G...............................A..  53

                                               
                                       V  S  S 
                    Query_2754   362  GTCTCCTCA  370
J  94.3% (50/53)    IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_317230

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           375     2e-106
IGHD1-20*01                                                                                           14.1    8.2   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD1-20*01	IGHJ4*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	GGTATACCTG	ATGCCTACGTGACAC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGTATACCTGATGCCTACGTGACACCTTTGACCAG	AGIPDAYVTPLT	244	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	243	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2755   1    ACCCTGTCCCTCACCTGTACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (243/246)  IGHV4-31*02  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2755   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCGCCAACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (243/246)  IGHV4-31*02  139  ....................................A..T..................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  I  P  D  A  Y  V  T 
                    Query_2755   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGGGTATACCTGATGCCTACGTGACA  270
V  98.8% (243/246)  IGHV4-31*02  229  .....................................................G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.0% (9/10)     IGHD1-20*01  1    ------------------------------------------------------------------......A...--------------  10

                                      ---------->                                  
                                       P  L  T  S  G  A  G  E  P  W  S  P  S  P  Q 
                    Query_2755   271  CCTTTGACCAGTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  315
J  93.2% (41/44)    IGHJ4*02     5    -.......T.C.......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_317233

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_2756   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_2756   91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y 
                    Query_2756   181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTAC  270
V  91.4% (223/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD2-2*01   8    ---------------------------------------------------------------------........T........----  24
J  88.5% (46/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_2756   271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  318
J  88.5% (46/52)    IGHJ6*02     15   ...GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_317232

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           410     1e-116
IGHD1-26*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              69.9    4e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCTTCT	TGGGAGCT	TTGTGTCGCCCCGGGGGCACGCCAATA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CTTCTTGGGAGCTTTGTGTCGCCCCGGGGGCACGCCAATAAC	LLGSFVSPRGHANN	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	71	3	0	95.9
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	290	113	108	5	0	95.6
Total	N/A	N/A	286	274	12	0	95.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_2757   5    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACAGCTTTACCA  94
V  95.8% (274/286)  IGHV5-51*03  2    ....G.....G...........................................................T...................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  I  I  Y  P  G  D  S  D  T  R  N  
                    Query_2757   95   CCTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGTTGGGAATCATCTATCCTGGTGACTCTGATACCAGAAACA  184
V  95.8% (274/286)  IGHV5-51*03  92   G...........G.....................................A....G..............................T...  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  P  F  Q  G  H  V  T  I  S  A  D  T  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_2757   185  GCCCGCCCTTCCAAGGCCACGTCACCATCTCAGCCGACACGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  95.8% (274/286)  IGHV5-51*03  182  .....T.............G...................A........G.........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  L  L  G  S  F  V  S  P  R  G  H  A  N  N  W  G  Q  G  T  L  V  T  V  S  
                    Query_2757   275  CCGCCATGTATTACTGCCTTCTTGGGAGCTTTGTGTCGCCCCGGGGGCACGCCAATAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  364
V  95.8% (274/286)  IGHV5-51*03  272  ................--------------------------------------------------------------------------  287
                                      T  A  M  Y  Y                                                                             
D  100.0% (8/8)     IGHD1-26*01  8    ----------------------........------------------------------------------------------------  15
J  100.0% (36/36)   IGHJ4*02     13   ---------------------------------------------------------.................................  45

                                         
                                      S  
                    Query_2757   365  CAG  367
J  100.0% (36/36)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_317234

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           397     8e-113
IGHD3-3*01                                                                                            19.9    0.17  
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCA	GAGTGCTTATTAT	TT	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGATCAGAGTGCTTATTATTTCAACTACTTCGACCCC	TRDQSAYYFNYFDP	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	70	5	0	93.3
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	296	8	6	2	0	75
Total	N/A	N/A	296	275	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  T  V  S  C  K  A  S  G  Y  T  F  I 
                    Query_2758   1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGACGGTCTCCTGCAAGGCATCTGGATACACGTTCATC  90
V  92.9% (275/296)  IGHV1-46*01  1    ...G...................G.............A.................A...T.......................C....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  Y  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  H  P  S  A  G  T  T  Y  Y 
                    Query_2758   91   AACTACTATATACACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCCACCCTAGTGCTGGTACCACATACTAC  180
V  92.9% (275/296)  IGHV1-46*01  91   .G.........G...................................................A.........G.....G....AG....  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  R  K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_2758   181  GCACGGAAATTCCAGGGCAGAGTCACCATGACCACGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGTAGCCTGAGATCTGAGGAC  270
V  92.9% (275/296)  IGHV1-46*01  181  ....A...G.........................G....................................C..................  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  T  R  D  Q  S  A  Y  Y  F  N  Y  F  D  P  W  G  Q  G  T  L  V  T  V  S 
                    Query_2758   271  ACGGCCGTTTATTACTGTACAAGAGATCAGAGTGCTTATTATTTCAACTACTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCC  360
V  92.9% (275/296)  IGHV1-46*01  271  ........G.........G.G.....----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  92.3% (12/13)    IGHD3-3*01   16   -----------------------------.....G.......------------------------------------------------  28
J  96.0% (48/50)    IGHJ5*02     2    --------------------------------------------.....GG.......................................  47

                                          
                                       S  
                    Query_2758   361  TCAG  364
J  96.0% (48/50)    IGHJ5*02     48   ....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_317237

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*02                                                                                           349     2e-98
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ5*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*02	IGHD3-22*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCTATCACTGC	GATACTAGTGGTTATTACTA	N/A	CGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCTATCACTGCGATACTAGTGGTTATTACTACGACTCC	ARAYHCDTSGYYYDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  I  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2759   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCATAAGTAACTATGGTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  94.8% (236/249)  IGHV3-64*02  47   ......................................T.C....G.....C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  R  N  G  D  R  T  Y  Y  G  D  S  V  E  G  R  F  T  I  S  R  D  N  S  
                    Query_2759   91   AATATGTTTCAGCTATTAGTCGTAATGGGGATCGCACATATTATGGAGACTCTGTGGAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (236/249)  IGHV3-64*02  137  ....................A.........G.A............C..........A.................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  V  Y  L  Q  M  G  S  L  R  P  E  D  M  A  V  Y  Y  C  A  R  A  Y  H  C  D  T  S  
                    Query_2759   181  AGAACACGGTGTATCTTCAGATGGGCAGCCTGAGACCTGAGGACATGGCTGTATATTACTGTGCGAGAGCCTATCACTGCGATACTAGTG  270
V  94.8% (236/249)  IGHV3-64*02  227  ........C..........A...............G................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  95.0% (19/20)    IGHD3-22*01  11   --------------------------------------------------------------------------------....G.....  20

                                      ---------------->                                  
                                      G  Y  Y  Y  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2759   271  GTTATTACTACGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  95.0% (19/20)    IGHD3-22*01  21   ..........-----------------------------------------  30
J  97.6% (40/41)    IGHJ5*01     11   ----------...............A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_317239

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           336     1e-94
IGHD1-26*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GGG	GGGAGCTACT	CTCCTTTT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGGGGGGAGCTACTCTCCTTTTTGCTTTTGATATC	VKGGATLLFAFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  M  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2760   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAATATGTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTAG  90
V  93.5% (231/247)  IGHV3-64*05  47   ..........................................G..GC.........................................G.  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  V  S  S  I  T  S  N  A  E  S  T  Y  Y  T  D  S  V  K  D  R  F  T  I  S  R  D  N  S  
                    Query_2760   91   AATCTGTCTCCTCTATTACTAGTAATGCGGAGAGCACATACTACACAGACTCAGTGAAGGACAGATTCACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-64*05  137  ...A...T..AG......G........G..GT............G...............G.............................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  G  G  A  T  L  L  F  
                    Query_2760   181  AGAACACGCTGTATCTTCAAATGAGCAGTCTGAGACCTGAGGACACGGCTGTGTATTACTGTGTGAAGGGGGGAGCTACTCTCCTTTTTG  270
V  93.5% (231/247)  IGHV3-64*05  227  ..............G....................G...............................-----------------------  293
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V                          
D  100.0% (10/10)   IGHD1-26*01  9    ----------------------------------------------------------------------..........----------  18
J  97.9% (46/47)    IGHJ3*02     4    ----------------------------------------------------------------------------------------..  5

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_2760   271  CTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  315
J  97.9% (46/47)    IGHJ3*02     6    ..........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_317238

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           427     9e-122
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_2761   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTA  90
V  97.2% (281/289)  IGHV5-51*03  6    ..............................................................................C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_2761   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  97.2% (281/289)  IGHV5-51*03  96   .......................................................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_2761   181  GTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.2% (281/289)  IGHV5-51*03  186  ........................C....C....A..................A..........A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2761   271  CATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  97.2% (281/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (15/15)   IGHD6-19*01  4    ----------------------------------...............----------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   ----------------------------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_314762

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           315     5e-88
IGHD2-8*01                                                                                            10.3    121  
IGHJ3*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-8*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCTCG	AATGG	CTTACAGAGAAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTCGAATGGCTTACAGAGAAATGATGCTTTTGATTTC	ARGSNGLQRNDAFDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	225	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  V  S  G  F  S  F  S  S  Y  N  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_2762   1    GGTCCCTGAGACTCTCCTGTGAGGTCTCTGGATTCAGCTTCAGTAGCTATAACATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (225/249)  IGHV3-21*01  47   .....................CA.C...........C..............G....A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  D  P  T  G  T  Y  I  Y  Y  A  D  S  V  K  G  R  H  T  I  S  R  D  N  A  
                    Query_2762   91   AGTGGGTCTCCTCCATTGATCCTACTGGCACTTACATATACTACGCAGACTCAGTGAAGGGCCGACACACCATCTCCAGAGACAACGCCA  180
V  90.4% (225/249)  IGHV3-21*01  137  ..........A......AG.AG..G.A.T.G..................................TT.......................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  V  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  G  S  N  G  L  Q  R  
                    Query_2762   181  AGAACTCGCTGGTTCTACAAATGAACAGCCTGAGAGCCGAAGACACGGCTATATATTACTGTGCGAGAGGCTCGAATGGCTTACAGAGAA  270
V  90.4% (225/249)  IGHV3-21*01  227  .......A...TA...G.......................G.........G.G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-8*01   14   --------------------------------------------------------------------------.....-----------  18

                                      ---------------->                                  
                                      N  D  A  F  D  F  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2762   271  ATGATGCTTTTGATTTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  98.0% (49/50)    IGHJ3*01     1    -.............G....................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_314763

Length=413
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-24*01                                                                                           416     2e-118
IGHD2-2*02                                                                                            27.6    0.001 
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-24*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAACA	TCTACCCCGGACACTGG	AGTACTACCAGGTGCTATAC	ACGACC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACATCTACCCCGGACACTGGAGTACTACCAGGTGCTATACACGACCACTACTACCACAGTATGGACGTC	ATSTPDTGVLPGAIHDHYYHSMDV	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	277	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T  E  L 
                    Query_2763   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTA  91
V  96.2% (277/288)  IGHV1-24*01  7    ........A........G........................................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T  E  L 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  V  Y  A  Q 
                    Query_2763   92   TCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAGGATGGTGAAACAGTTTATGCCCAG  181
V  96.2% (277/288)  IGHV1-24*01  97   .................................................................A............A.C..C..A...  186
                                       S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  I  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  E  D  A  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  G  D  T  A 
                    Query_2763   182  AAGTTCCAGGGCAGAGTCACCATGACCGAGGACGCATCTACAGACACAGCCTATATGGAGCTGAGCAGCCTGAGATCTGGGGACACGGCC  271
V  96.2% (277/288)  IGHV1-24*01  187  .................................A...................C.........................A..........  276
                                       K  F  Q  G  R  V  T  M  T  E  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><-------------------------------CDR3-IMGT------------------------------>      
                                       V  Y  Y  C  A  T  S  T  P  D  T  G  V  L  P  G  A  I  H  D  H  Y  Y  H  S  M  D  V  W  G 
                    Query_2763   272  GTCTATTACTGTGCAACATCTACCCCGGACACTGGAGTACTACCAGGTGCTATACACGACCACTACTACCACAGTATGGACGTCTGGGGC  361
V  96.2% (277/288)  IGHV1-24*01  277  ..G...............------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  T                                                                         
D  90.0% (18/20)    IGHD2-2*02   11   -----------------------------------....G......C........-----------------------------------  30
J  92.9% (52/56)    IGHJ6*02     7    -------------------------------------------------------------........T..G.................  35

                                                                 
                                       Q  G  T  T  V  T  V  S  S 
                    Query_2763   362  CAGGGAACCACGGTCACCGTCTCCTCA  388
J  92.9% (52/56)    IGHJ6*02     36   ..A..G.....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40498920


Query= Query_314761

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           296     2e-82
IGHD6-13*01                                                                                           16.1    2.0  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	230	262	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	106	8	0	93
Total	N/A	N/A	217	203	14	0	93.5


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  L  S  G  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_2764   13   GTCTGGATTCACGTTGAGTGGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  93.5% (203/217)  IGHV3-33*03  72   ............C..C...A.C.....C..............................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  I  N  K  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  D  S  K  N  T  L  F  L  Q  M  N
                    Query_2764   103  TGGAATTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACGACTCCAAGAACACCCTGTTTCTGCAGATGAA  192
V  93.5% (203/217)  IGHV3-33*03  162  .....G........................................A...........A.............G....A......A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------CDR3-IMGT----------->                    
                                        S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  D  P  W  G  Q  G  T  L  V
                    Query_2764   193  CAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  282
V  93.5% (203/217)  IGHV3-33*03  252  .........................G.G.....C...-----------------------------------------------------  288
                                        S  L  R  A  E  D  T  A  V  Y  Y  C                                                      
D  90.9% (10/11)    IGHD6-13*01  7    ------------------------------------------....G......-------------------------------------  17
J  100.0% (46/46)   IGHJ5*02     6    ----------------------------------------------------------................................  37

                                                    
                                        T  V  S  S  
                    Query_2764   283  CACCGTCTCCTCAG  296
J  100.0% (46/46)   IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_314766

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           341     6e-96
IGHD6-19*01                                                                                           16.1    2.4  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CTCTGTGAC	CAGTGCCTGGT	CGTTTGGTCCCCCCCCACGACTCT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACTCTGTGACCAGTGCCTGGTCGTTTGGTCCCCCCCCACGACTCTACTTCTTTGACTCC	ARHSVTSAWSFGPPPRLYFFDS	246	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  T  T  Y  H  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_2765   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTACTACTTACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  93.6% (234/250)  IGHV4-39*01  50   .....TCC...A.................................G..G....T..................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  S  Y  S  G  S  T  D  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  
                    Query_2765   94   TGGAGTGGATTGGGAGTATCTCTTATAGTGGGAGCACCGACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCCGTGGACACGTCCA  183
V  93.6% (234/250)  IGHV4-39*01  140  .....................A................T..................A.....................A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  P  D  T  A  V  Y  Y  C  A  R  H  S  V  T  S  A  W  
                    Query_2765   184  AGAATCAATTCTCCCTGAAGCTGAGCTCTGTGACCGCCCCAGACACGGCTGTATATTACTGTGCGAGACACTCTGTGACCAGTGCCTGGT  273
V  93.6% (234/250)  IGHV4-39*01  230  ....C..G..............................G.............G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD6-19*01  9    -------------------------------------------------------------------------------.....G.....  19

                                      -CDR3-IMGT--------------------------->                                  
                                      S  F  G  P  P  P  R  L  Y  F  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2765   274  CGTTTGGTCCCCCCCCACGACTCTACTTCTTTGACTCCTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  345
J  93.8% (45/48)    IGHJ4*02     1    ------------------------...A........A..................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_314767

Length=308
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            330     9e-93
IGHD2-8*01                                                                                            12.2    28   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	TGGTGT	GCGG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGGTGTGCGG	ASGVR	238	252	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	123	24	23	1	0	95.8
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	229	220	9	0	96.1


Alignments

                                     <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                        A  A  S  G  F  T  F  S  N  S  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  
                    Query_2766  14   GTGCAGCCTCTGGATTCACCTTTAGTAACAGTTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAA  103
V  96.1% (220/229)  IGHV3-7*01  65   ...........................G.TA.........C.................................................  154
                                        A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                     ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                     K  P  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  S  S  L  F  L  
                    Query_2766  104  AGCCAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAAAGCTCACTGTTTCTGC  193
V  96.1% (220/229)  IGHV3-7*01  155  ...A.....................................................................G.A........A.....  244
                                     K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                     -------------------------------------------><--CDR3-IMGT-->                               
                                     Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  G  V  R  W  G  Q  G  T  L  V  T  V  S  
                    Query_2766  194  AAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGTGGTGTGCGGTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  283
V  96.1% (220/229)  IGHV3-7*01  245  ..................C..............................-----------------------------------------  293
                                     Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (6/6)     IGHD2-8*01  16   -------------------------------------------------......-----------------------------------  21
J  100.0% (34/34)   IGHJ4*02    15   -----------------------------------------------------------...............................  45

                                        
                                     S  
                    Query_2766  284  CAG  286
J  100.0% (34/34)   IGHJ4*02    46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 29671071


Query= Query_314764

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           333     1e-93
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CACCC	TATTGTAGTAGTGTCAGTTGTTATG	AGGGATC	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGCACCCTATTGTAGTAGTGTCAGTTGTTATGAGGGATCCTACCATTACGGTATGGACGTC	VRAPYCSSVSCYEGSYHYGMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  G  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2767   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTGGATATGCAATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-33*01  47   ....................G....G..................A.C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  T  V  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2767   91   AGTGGGTGGCAATTATATGGTATGATGGAACTGTTAAATACTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (231/249)  IGHV3-33*01  137  ...........G..................G.AA...........C............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  D  D  T  A  V  Y  F  C  V  R  A  P  Y  C  S  S  V  
                    Query_2767   181  AGAACACGTTGTATTTGCAAATGGATAGCCTGAGAGCCGACGACACGGCTGTGTATTTCTGTGTGAGAGCACCCTATTGTAGTAGTGTCA  270
V  92.8% (231/249)  IGHV3-33*01  227  ........C.....C........A.C..............G................A.....C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.0% (21/25)    IGHD2-2*01   5    --------------------------------------------------------------------------............AC..  20

                                      -CDR3-IMGT--------------------------->                                 
                                      S  C  Y  E  G  S  Y  H  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2767   271  GTTGTTATGAGGGATCCTACCATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  84.0% (21/25)    IGHD2-2*01   21   .C..C....--------------------------------------------------------------  29
J  96.4% (53/55)    IGHJ6*02     8    ----------------....T.C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_314765

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           405     4e-115
IGHD3-22*01                                                                                           33.4    2e-05 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCGGATC	ACTATGATAGTAGTGGT	C	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCGGATCACTATGATAGTAGTGGTCACTACTACTACAATATGGACGTC	ARVPDHYDSSGHYYYNMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	70	1	0	98.6
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  V  S  S  
                    Query_2768   5    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCGTCAGCAGCT  94
V  94.5% (275/291)  IGHV1-69*01  5    ...................G............................................................T.........  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  I  L  M  F  D  T  P  N  Y  A  
                    Query_2768   95   ATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTGGAGTGGATGGGAGTGATCATCCTTATGTTTGATACACCAAACTACGCAC  184
V  94.5% (275/291)  IGHV1-69*01  95   ...C....................................T.............G........C...C....G....G............  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  N  F  Q  G  R  V  T  I  T  A  D  E  S  T  N  T  A  Y  M  E  L  S  N  L  R  S  E  D  T  
                    Query_2768   185  AGAACTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCGACGAACACAGCCTACATGGAGTTGAGCAACCTGAGATCTGAGGACACGG  274
V  94.5% (275/291)  IGHV1-69*01  185  ....G...................................C....G................C......G....................  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-----------------------CDR3-IMGT----------------------->                   
                                      A  V  Y  F  C  A  R  V  P  D  H  Y  D  S  S  G  H  Y  Y  Y  N  M  D  V  W  G  Q  G  T  T  
                    Query_2768   275  CCGTTTATTTCTGTGCGAGAGTTCCGGATCACTATGATAGTAGTGGTCACTACTACTACAATATGGACGTCTGGGGCCAAGGGACCACGG  364
V  94.5% (275/291)  IGHV1-69*01  275  ....G....A...........---------------------------------------------------------------------  295
                                      A  V  Y  Y  C  A  R                                                                       
D  100.0% (17/17)   IGHD3-22*01  6    ------------------------------.................-------------------------------------------  22
J  96.4% (54/56)    IGHJ6*02     7    ------------------------------------------------...........GG.............................  48

                                                    
                                      V  T  V  S  S 
                    Query_2768   365  TCACCGTCTCCTCA  378
J  96.4% (54/56)    IGHJ6*02     49   ..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_314768

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ2*01                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTTGGGCAGTATC	CTATGGGTCGGGGAGTTA	GGTTCGC	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACTTGGGCAGTATCCTATGGGTCGGGGAGTTAGGTTCGCGGTACTTCGATCTC	AKDLGSILWVGELGSRYFDL	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  Y  A  M  D  W  V  R  Q  P  P  G  K  G  L  
                    Query_2769   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACTATGCCATGGACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ..........................................G..G..........AG.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  R  G  D  N  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2769   91   AGTGGGTCTCAGCAATTAGTGGTCGTGGTGATAACACATTTTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  .............T.........A......G..G.....AC.................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  S  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  L  G  S  I  L  W  
                    Query_2769   181  AGAGTACGCTGTATCTGCAAATGGACAGCCTGAGAGCCGAAGACACGGCCGTATATTACTGTGCGAAAGACTTGGGCAGTATCCTATGGG  270
V  94.0% (235/250)  IGHV3-23*01  227  ...AC..................A................G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  94.4% (17/18)    IGHD3-10*01  7    -----------------------------------------------------------------------------------......T  13

                                      R3-IMGT------------------------>                                  
                                      V  G  E  L  G  S  R  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2769   271  TCGGGGAGTTAGGTTCGCGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  336
D  94.4% (17/18)    IGHD3-10*01  14   ...........-------------------------------------------------------  24
J  100.0% (48/48)   IGHJ2*01     6    ------------------................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_263444

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_2770   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_2770   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_2770   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_2770   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_80192

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           291     6e-81
IGHD3-10*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGCTGGAGGGGGC	TTCGGGACGTTACTATAA	TGGACGGCGGGGGATTCC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGCTGGAGGGGGCTTCGGGACGTTACTATAATGGACGGCGGGGGATTCCGGACGTC	ARLEGASGRYYNGRRGIPDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	216	30	0	87.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  N  S  H  Y  W  V  W  I  R  Q  S  P  V  K  G 
                    Query_2771   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCACCAATAGTCACTACTGGGTCTGGATCCGCCAGTCCCCAGTGAAGGGG  90
V  87.8% (216/246)  IGHV4-39*01  49   ...........................................GT.G....T.........G.............C......G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  V  F  Y  S  G  T  T  S  Y  N  P  S  L  R  G  R  V  T  I  S  V  G  P  S 
                    Query_2771   91   CTGGAGTGGATTGGGACCGTCTTTTATAGCGGGACCACCTCCTACAACCCGTCCCTCAGGGGTCGAGTCACCATCTCCGTTGGCCCGTCC  180
V  87.8% (216/246)  IGHV4-39*01  139  ................GTA...A......T....G.....A.................A.A.............A.....A.A.A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       N  N  Q  F  S  L  E  V  R  S  V  T  A  A  D  T  S  I  Y  Y  C  A  R  L  E  G  A  S  G  R 
                    Query_2771   181  AACAACCAATTCTCCCTGGAGGTGAGGTCTGTGACCGCCGCGGACACCTCTATTTATTACTGTGCGCGGCTGGAGGGGGCTTCGGGACGT  270
V  87.8% (216/246)  IGHV4-39*01  229  ..G.....G.........A..C....C..............A.....GG..G.G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  83.3% (15/18)    IGHD3-10*01  13   --------------------------------------------------------------------------------......GA..  22

                                      DR3-IMGT------------------------>                                 
                                       Y  Y  N  G  R  R  G  I  P  D  V  W  G  Q  G  T  T  V  T  V  A  S 
                    Query_2771   271  TACTATAATGGACGGCGGGGGATTCCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCGCCTCA  336
D  83.3% (15/18)    IGHD3-10*01  23   ..T.....----------------------------------------------------------  30
J  97.5% (39/40)    IGHJ6*02     23   --------------------------..................................T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_197945

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           336     1e-94
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	CGGACGTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGACGTAACTTTAACTAC	ASGRNFNY	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2772   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACCTTCAGTACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-21*01  47   ................................T............G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  T  N  N  S  Y  V  S  Y  A  G  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_2772   91   AGTGGGTCTCATCCATTAGTACTAATAATTCTTACGTATCCTACGCGGGCTCAGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.5% (231/247)  IGHV3-21*01  137  .....................G..G..G.AG....A...A......A.A........A................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      K  T  S  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  S  G  R  N  F  N  Y  W  
                    Query_2772   181  AGACCTCCCTGTATCTGCAAATGAACACCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGCGGACGTAACTTTAACTACTGGG  270
V  93.5% (231/247)  IGHV3-21*01  227  ...A...A...................G........................G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  95.3% (41/43)    IGHJ4*02     4    ---------------------------------------------------------------------------.....G.........  18

                                                                  
                                      G  L  G  T  L  V  T  V  S  S
                    Query_2772   271  GCCTGGGAACCCTGGTCACCGTCTCCTC  298
J  95.3% (41/43)    IGHJ4*02     19   ...A........................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_197944

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD2-2*01                                                                                            10.3    117  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACGCGGGATGGCTCCA	ATGCC	TA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACGCGGGATGGCTCCAATGCCTATTGACTGC	ARGRGMAPMPIDC	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  T  Y  Y  W  T  W  I  R  R  P  P  G  K  G  L  E 
                    Query_2773   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTACTTACTACTGGACCTGGATCCGGCGGCCCCCAGGGAAGGGACTGGAA  90
V  93.0% (227/244)  IGHV4-59*01  49   .......................................A...G...........G...........A.....................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  T  H  Y  S  G  D  T  N  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  T  S  K  N 
                    Query_2773   91   TGGATTGGCTATACTCATTACAGTGGGGACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCATCATATCAGTAGACACGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*01  139  ........G....TCT...........AG...................................C.........................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       L  L  S  L  R  L  S  S  V  T  A  A  D  T  A  G  Y  Y  C  A  R  G  R  G  M  A  P  M  P  I 
                    Query_2773   181  CTGCTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGGGTATTATTGTGCGAGAGGACGCGGGATGGCTCCAATGCCTATT  270
V  93.0% (227/244)  IGHV4-59*01  229  .A.T.........A................................T......C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-2*01   27   ---------------------------------------------------------------------------------.....----  31
J  97.6% (40/41)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                 
                                       D  C  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_2773   271  GACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  309
J  97.6% (40/41)    IGHJ4*02     9    ....A..................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_197947

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           307     1e-85
IGHD5-12*01                                                                                           12.2    29   
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCC	GTGGAT	TAAGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCGTGGATTAAGCTTC	ATRGLSF	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	221	25	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  D  M  N  W  L  R  Q  A  P  G  K  G  P  
                    Query_2774   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACTTTCAGTAATTACGACATGAACTGGCTCCGCCAGGCTCCTGGGAAGGGGCCGG  90
V  89.8% (221/246)  IGHV3-48*03  47   .....................C...............C.......G...T..A.........G.............A..........T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  D  I  T  Y  Y  A  D  S  V  E  G  R  F  T  I  P  R  D  N  A  
                    Query_2774   91   AGTGGGTCTCATCCATTAGTAGTCGTGGAGATATCACATACTACGCGGACTCAGTGGAGGGCCGATTCACCATCCCCAGAGACAACGCCA  180
V  89.8% (221/246)  IGHV3-48*03  137  .......T....A..........A....TAG..C..T.........A.....T...A.................T...............  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  S  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  T  R  G  L  S  F  W  G  
                    Query_2774   181  AGAACTCACTGTCCCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTCTTTATTACTGTGCGACCCGTGGATTAAGCTTCTGGGGCC  270
V  89.8% (221/246)  IGHV3-48*03  227  ............AT......................C...G.........G...............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD5-12*01  1    ---------------------------------------------------------------------......---------------  6
J  94.3% (33/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  A  Q  V  T  V  S  S  
                    Query_2774   271  AGGGAGCCCAGGTCACCGTCTCCTCAG  297
J  94.3% (33/35)    IGHJ4*02     22   .....A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_197946

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHD2-15*01                                                                                           21.8    0.039
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AAAGTCT	GATATTGTAGT	CCC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGTCTGATATTGTAGTCCCTATGGACGTC	AKSDIVVPMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2775   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTACCTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.0% (227/244)  IGHV3-21*01  47   .....................................C.......G......C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  V  G  T  Y  I  E  Y  A  S  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_2775   91   AGTGGGTCTCGTACATTTCTAGTGTTGGTACTTACATAGAGTACGCAAGCTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  93.0% (227/244)  IGHV3-21*01  137  ..........A.C....AG....AG.A...G.......T.C......GA......................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  S  D  I  V  V  P  M  
                    Query_2775   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGCAAAGTCTGATATTGTAGTCCCTATGG  270
V  93.0% (227/244)  IGHV3-21*01  227  .........................................................A......--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD2-15*01  3    -----------------------------------------------------------------------...........--------  13
J  100.0% (43/43)   IGHJ6*02     20   -------------------------------------------------------------------------------------.....  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2775   271  ACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  308
J  100.0% (43/43)   IGHJ6*02     25   ......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_197941

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           297     7e-83
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-22*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AACAG	TCTAC	TACTATGATAGTAGT	ATTTATCAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAACAGTCTACTACTATGATAGTAGTATTTATCACGACTAC	NSLLL***YLSRL	250	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	249	115	102	12	1	88.7
CDR3-IMGT (germline)	250	256	7	6	1	0	85.7
Total	N/A	N/A	256	225	30	1	87.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  L  S  F  S  D  A  W  L  S  W  V  R  H  T  P  G  R  G  L  
                    Query_2776   1    GGTCCCTGAGACTCTCCTGTGCAGTGTCTGGATTATCTTTCAGTGACGCTTGGCTGAGCTGGGTCCGCCACACTCCAGGGAGGGGACTGG  90
V  87.9% (225/256)  IGHV3-15*01  47   .......T................CC........CA........A....C...A................GG.........A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  I  G  R  I  K  S  R  T  D  G  G  A  A  E  Y  A  A  P  V  R  G  R  F  T  I  S  R  D  
                    Query_2776   91   AGTGGATTGGCCGTATCAAAAGCAGAACTGATGGTGGGGCAGCAGAGTACGCTGCACCCGTGAGAGGCAGATTCACCATCTCAAGAGATG  180
V  87.9% (225/256)  IGHV3-15*01  137  .....G..........T.......A.............A..A....C................A..........................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT-----------------------------------------------------><----------------CDR3
                                      D  S  K  K  H  A  V  F  A  S  D  *  P  E  D  R  R  L  R  R  V  L  L  Y  N  S  L  L  L  *  
                    Query_2776   181  ACTCAAAAAAACACGCTGTATTTGCAAGTGACTAGCCTGAAGACCGACGACTCAGGCGTGTATTATTGTACAACAGTCTACTACTATGAT  270
V  87.9% (225/256)  IGHV3-15*01  227  .T..-................C.....A...AC........A.....G...A...C.........C.....C....--------------  301
                                      D  S   K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                
D  100.0% (15/15)   IGHD3-22*01  5    ---------------------------------------------------------------------------------.........  13

                                      -IMGT--------------->                                  
                                      *  *  Y  L  S  R  L  L  G  P  G  N  P  G  H  R  L  L   
                    Query_2776   271  AGTAGTATTTATCACGACTACTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  325
D  100.0% (15/15)   IGHD3-22*01  14   ......-------------------------------------------------  19
J  97.5% (39/40)    IGHJ4*02     9    ---------------......................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_197949

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64D*06                                                                                          296     2e-82
IGHD4-17*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64D*06	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAG	GGCTG	ACGGTGAC	CACCAATCTCCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAAAGGGCTGACGGTGACCACCAATCTCCTCTTTGACCAC	VKGLTVTTNLLFDH	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	219	30	0	88


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  N  F  S  R  Y  S  L  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_2777    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGTAGGTATAGTCTGTACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  88.0% (219/249)  IGHV3-64D*06  47   ....................T...............C.........C...GC.A..C.................................  136
                                          S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  Y  V  A  A  I  S  P  S  G  A  M  S  Y  Y  A  D  S  V  K  G  R  F  T  N  S  R  D  N  S  
                    Query_2777    91   AATATGTCGCAGCTATTAGCCCTTCCGGGGCGATGTCATACTACGCAGACTCGGTGAAGGGCAGGTTCACCAACTCCAGAGACAATTCCA  180
V  88.0% (219/249)  IGHV3-64D*06  137  .......TT..........TAG.AAT....GT.GCA................C...........A.......T.................  226
                                       E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                       K  N  T  L  Y  L  Q  M  S  S  L  R  V  E  D  S  A  V  Y  H  C  V  K  G  L  T  V  T  T  N  
                    Query_2777    181  AGAACACACTGTATCTTCAAATGAGCAGTCTGAGAGTTGAGGACTCGGCGGTCTATCACTGTGTCAAAGGGCTGACGGTGACCACCAATC  270
V  88.0% (219/249)  IGHV3-64D*06  227  .......G............................C.......A....T..G...T.......G....---------------------  295
                                       K  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (8/8)     IGHD4-17*01   6    --------------------------------------------------------------------------........--------  13

                                       ------------->                                  
                                       L  L  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2777    271  TCCTCTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (43/44)    IGHJ4*02      5    ----.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_198795

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           372     2e-105
IGHD6-19*01                                                                                           12.2    34    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	GCTCCAG	GGCTGG	GATT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCCAGGGCTGGGATTCTTTGACTAT	AAPGLGFFDY	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	262	24	0	91.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  A  S  G  N  T  L  T  N  N
                    Query_2778   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCGTCAGTGAAAGTTGCCTGCAAGGCATCCGGAAACACCCTCACCAACAA  90
V  91.6% (262/286)  IGHV1-46*01  6    ..................G.......................C........G...T.............T...T.....T......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  N  K  T  T  Y  A  Q
                    Query_2778   91   CTTCATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTAATAAGACAACCTATGCACA  180
V  91.6% (262/286)  IGHV1-46*01  96   ..AT..................................................................GG..GC....G...C.....  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  L  T  M  T  R  V  T  S  T  R  T  V  Y  M  E  L  S  N  L  R  S  E  D  T  A
                    Query_2778   181  GAAGTTCCAGGGCAGACTGACCATGACTAGGGTCACGTCCACGAGAACAGTCTACATGGAGCTGAGCAACCTGAGATCTGAGGACACGGC  270
V  91.6% (262/286)  IGHV1-46*01  186  ................G.C........C....A............C......................G.....................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        V  Y  Y  C  A  A  P  G  L  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_2778   271  CGTGTATTACTGCGCGGCTCCAGGGCTGGGATTCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  347
V  91.6% (262/286)  IGHV1-46*01  276  ............T...-------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                              
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------......------------------------------------------------  18
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------.........C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_295250

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     4e-95
IGHD1-1*01                                                                                            12.2    31   
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTAC	AEEKRRVPRGTFHY	236	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	10	22	13	12	1	0	92.3
CDR1-IMGT	23	46	24	21	3	0	87.5
FR2-IMGT	47	97	51	50	1	0	98
CDR2-IMGT	98	121	24	23	1	0	95.8
FR3-IMGT	122	235	114	112	2	0	98.2
CDR3-IMGT (germline)	236	243	8	7	1	0	87.5
Total	N/A	N/A	234	225	9	0	96.2


Alignments

                                      <-FR1-IMGT--><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-
                                        C  T  A  S  G  I  T  F  T  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I
                    Query_2779   10   CTGTACAGCCTCTGGAATCACCTTTACCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCCAT  99
V  96.2% (225/234)  IGHV3-23*01  63   ....G...........T.........G..G.........................................................T..  152
                                        C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I

                                      ------CDR2-IMGT------><----------------------------------------------------FR3-IMGT-------
                                        S  G  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  K  N  T  L  Y  L
                    Query_2779   100  TAGTGGTGGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGAAGAACACGCTGTATCT  189
V  96.2% (225/234)  IGHV3-23*01  153  .......A......................................................G.........C.................  242
                                        S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L

                                      ---------------------------------------------><----------------CDR3-IMGT--------------->  
                                        Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  G  T  F  H  Y  W
                    Query_2779   190  GCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTACTG  279
V  96.2% (225/234)  IGHV3-23*01  243  .................................................A....------------------------------------  296
                                        Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                       
D  100.0% (6/6)     IGHD1-1*01   12   --------------------------------------------------------......----------------------------  17
J  97.7% (43/44)    IGHJ4*02     5    ------------------------------------------------------------------------------....G.......  16

                                                                      
                                        G  Q  G  T  L  V  T  V  S  S  
                    Query_2779   280  GGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  311
J  97.7% (43/44)    IGHJ4*02     17   ................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_150559

Length=407
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           377     1e-106
IGHD2-2*01                                                                                            27.6    9e-04 
IGHJ2*01                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGAGAGGGACT	AGGATATTGTAGGAGTA	GTGCCGGATGCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGAGAGGGACTAGGATATTGTAGGAGTAGTGCCGGATGCCACTGGTACTTCGATCTC	RERERD*DIVGVVPDATGTSIS	283	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	69	70	68	1	1	97.1
CDR1-IMGT	70	93	24	22	2	0	91.7
FR2-IMGT	94	144	51	46	5	0	90.2
CDR2-IMGT	145	168	24	21	3	0	87.5
FR3-IMGT	169	282	114	103	11	0	90.4
CDR3-IMGT (germline)	283	290	8	8	0	0	100
Total	N/A	N/A	291	268	22	1	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V   S  L  G  L  R  *  R  S  L  G  P  R  *  R  S  P  A  R  L  L  E  A  P  S  G  V  
                    Query_2780   1    GCAGCTGGT-CAGTCTGGGGCTGAGGTGAAGGAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGGAGTTA  89
V  92.1% (268/291)  IGHV1-69*01  6    .........G.....................A....................................................C..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                      M  L  S  V  G  Y  D  R  P  L  D  K  G  L  S  G  W  E  E  S  F  L  S  L  V  P  Q  I  T  H  
                    Query_2780   90   TGCTATCAGTTGGCTACGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGAGGAATCATTCCTATCTTTGGTACCCCAAATAACGCACA  179
V  92.1% (268/291)  IGHV1-69*01  96   .........C...G.G.....................C................G.....C..............AG....CT.......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                      R  I  S  R  A  E  S  R  L  P  R  T  K  T  R  P  Q  F  T  W  N  *  A  A  *  D  L  R  T  R  
                    Query_2780   180  GAATTTCCAGGGCAGAGTCACGATTACCGCGGACGAAAACACGGCCACAGTTTACATGGAACTGAGCAGCCTGAGATCTGAGGACACGGC  269
V  92.1% (268/291)  IGHV1-69*01  186  ...G.................................TC....AG.....CC........G.............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------------CDR3-IMGT--------------------------->           
                                      P  C  T  T  V  R  E  R  E  R  D  *  D  I  V  G  V  V  P  D  A  T  G  T  S  I  S  G  A  V  
                    Query_2780   270  CGTGTACTACTGTGCGAGAGAGGGAGAGGGACTAGGATATTGTAGGAGTAGTGCCGGATGCCACTGGTACTTCGATCTCTGGGGCCGTGG  359
V  92.1% (268/291)  IGHV1-69*01  276  ......T..............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.1% (16/17)    IGHD2-2*01   1    ---------------------------------............T....----------------------------------------  17
J  100.0% (51/51)   IGHJ2*01     3    --------------------------------------------------------------............................  30

                                                             
                                      A  P  W  S  L  S  P  Q 
                    Query_2780   360  CACCCTGGTCACTGTCTCCTCAG  382
J  100.0% (51/51)   IGHJ2*01     31   .......................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39867768


Query= Query_45981

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD2-2*01                                                                                            14.1    8.5   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCACCC	CTATGCC	TATGCCAGCGGGGGATATG	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACCCCTATGCCTATGCCAGCGGGGGATATGTTGAGTCC	ARGHPYAYASGGYVES	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  T  W  I  R  Q  H  P  E  K  A 
                    Query_2781   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGACCTGGATCCGCCAGCACCCAGAGAAGGCC  90
V  96.8% (242/250)  IGHV4-31*03  49   .............................................................G....................G.....G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       P  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  T  S 
                    Query_2781   91   CCGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCAGTAGACACGTCT  180
V  96.8% (242/250)  IGHV4-31*03  139  .T..................................................................T.C...................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  P  Y  A  Y  A 
                    Query_2781   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGGTCACCCCTATGCCTATGCC  270
V  96.8% (242/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD2-2*01   25   -----------------------------------------------------------------------------.......------  31

                                      GT------------------>                                  
                                       S  G  G  Y  V  E  S  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_2781   271  AGCGGGGGATATGTTGAGTCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  325
J  92.9% (39/42)    IGHJ4*02     7    -------------....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_195476

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           321     6e-90
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_2782   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  L  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_2782   91   TGGATTGCGTATCTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_2782   181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.8% (225/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_2782   271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_80988

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           305     3e-85
IGHD1-26*01                                                                                           10.3    114  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	CCCCA	TGGGA	CT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACCCCATGGGACTCTTTGACTAC	ANPMGLFDY	240	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	24	17	4	3	70.8
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	247	223	21	3	90.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  A  M  S  W  V  R  Q  T  P  G  R  G  L  
                    Query_2783   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGCTTCACCTTTAGCGACTATGCCATGAGCTGGGTCCGCCAGACTCCGGGGAGGGGGCTGG  90
V  90.3% (223/247)  IGHV3-23*01  47   ...............................A............AG.........................G....A....A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  S  G  A     T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2783   91   AGTGGGTCTCATCTATCAGTGACAGTGGTGCTA---CATTCTACGCGGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCGA  177
V  90.3% (223/247)  IGHV3-23*01  137  ...........G....T....GT.......G..GCA...A......A.........................................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  T  L  Y  L  Q  M  N  N  L  R  L  E  D  T  A  I  Y  Y  C  A  N  P  M  G  L  F  D  Y  
                    Query_2783   178  AGAATACACTGTATCTGCAAATGAACAACCTGAGACTCGAGGACACGGCCATCTATTACTGTGCGAACCCCATGGGACTCTTTGACTACT  267
V  90.3% (223/247)  IGHV3-23*01  227  ....C..G...................G.......GC.............G.A..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD1-26*01  8    ------------------------------------------------------------------------.....-------------  12
J  97.7% (43/44)    IGHJ4*02     5    -------------------------------------------------------------------------------...........  15

                                                                       
                                      W  G  Q  G  T  L  V  A  V  S  S  
                    Query_2783   268  GGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  300
J  97.7% (43/44)    IGHJ4*02     16   ....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_334658

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            377     1e-106
IGHD2-15*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCACCCCAGTATCGT	GTGGTGGCTGCTAC	GGGAC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCACCCCAGTATCGTGTGGTGGCTGCTACGGGACACTACTATTACGGTATGGACGTC	AAPQYRVVAATGHYYYGMDV	283	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	69	69	67	2	0	97.1
CDR1-IMGT	70	93	24	21	3	0	87.5
FR2-IMGT	94	144	51	50	1	0	98
CDR2-IMGT	145	168	24	22	2	0	91.7
FR3-IMGT	169	282	114	100	14	0	87.7
CDR3-IMGT (germline)	283	285	3	3	0	0	100
Total	N/A	N/A	285	263	22	0	92.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_2784   1    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGCTACACCTTCACTAGTTAT  90
V  92.3% (263/285)  IGHV1-8*01   7    .................G...............................A.....................A...........C......  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  S  S  G  N  T  G  F  A  Q 
                    Query_2784   91   GACATCAACTGGGTGCGGCAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCAAGCAGTGGTAACACAGGCTTTGCACAG  180
V  92.3% (263/285)  IGHV1-8*01   97   ..T..............A............................................T.A.................A.......  186
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  K  V  S  L  T  R  D  I  S  T  S  T  G  Y  M  E  L  S  S  L  R  S  E  D  T  A 
                    Query_2784   181  AAGTTCCAGGGCAAAGTCAGTTTGACCAGGGATATTTCCACAAGCACAGGCTACATGGAACTGAGTAGCCTGAGATCTGAGGACACGGCC  270
V  92.3% (263/285)  IGHV1-8*01   187  .............G.....CCA........A.C.CC....T........C.........G.....C........................  276
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><-------------------------CDR3-IMGT------------------------>                  
                                       V  Y  F  C  A  A  P  Q  Y  R  V  V  A  A  T  G  H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T 
                    Query_2784   271  GTGTATTTCTGTGCGGCACCCCAGTATCGTGTGGTGGCTGCTACGGGACACTACTATTACGGTATGGACGTCTGGGGCCAAGGGACCACG  360
V  92.3% (263/285)  IGHV1-8*01   277  .......A.......---------------------------------------------------------------------------  291
                                       V  Y  Y  C  A                                                                            
D  92.9% (13/14)    IGHD2-15*01  15   ------------------------------.....A........----------------------------------------------  28
J  98.2% (55/56)    IGHJ6*02     7    -------------------------------------------------.......C.................................  47

                                                     
                                       V  T  V  S  S 
                    Query_2784   361  GTCACCGTCTCCTCA  375
J  98.2% (55/56)    IGHJ6*02     48   ...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_334659

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           299     3e-83
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGGG	AGCAATGGCTGG	GGAAGGTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTATGGACGCC	ARGHRGSNGWGRYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	22	2	6	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	223	22	6	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  S  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_2785   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGCCCTTCAGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.8% (223/251)  IGHV4-34*01  49   .......................C..T......T.........------....C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  L  D  T  S 
                    Query_2785   91   CTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAATCCGTCCCTCCAGAGTCGAGTCACCATATCACTAGACACGTCC  180
V  88.8% (223/251)  IGHV4-34*01  133  .....G.............T..A....AG.....G............C.........A....................G...........  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  G  S  N  G 
                    Query_2785   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGGGAGCAATGGC  270
V  88.8% (223/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  R  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  I  S  S 
                    Query_2785   271  TGGGGAAGGTACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCATCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.............T................A.....A..G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_334655

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	111	3	0	97.4
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	282	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  
                    Query_2786   3    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTTCCA  92
V  95.6% (282/295)  IGHV5-51*01  2    ....G........G....................................................................C...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  
                    Query_2786   93   CTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACA  182
V  95.6% (282/295)  IGHV5-51*01  92   GC..C.......G.................................................T.................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_2786   183  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  95.6% (282/295)  IGHV5-51*01  182  ...........C.....................C........................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  
                    Query_2786   273  CCGCCATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  362
V  95.6% (282/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  85.7% (12/14)    IGHD1-26*01  4    ---------------------------------...G....A.....-------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------------......TA................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_2786   363  CGGTCACCGTCTCTTCA  379
J  94.7% (54/57)    IGHJ6*02     46   .............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_334656

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*04                                                                                           296     2e-82
IGHD2-21*01                                                                                           10.3    124  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*04	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATAAAGACCCCGGAGGGCGC	CTATT	TCTCG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATAAAGACCCCGGAGGGCGCCTATTTCTCGTACTACGGTATGGACGTC	ARIKTPEGAYFSYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	218	29	0	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  I  A  S  G  F  T  F  S  D  F  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2787   1    GGTCCCTGAGACTCTCCTGTATAGCCTCTGGATTCACCTTCAGTGATTTTACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGC  90
V  88.3% (218/247)  IGHV3-21*04  47   ....................GC......................AGC.A..G.................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  S  S  G  T  Y  T  Y  Y  A  D  S  L  Q  G  R  F  T  I  A  R  D  N  A  
                    Query_2787   91   AGTGGGTGTCATCCATTAGTAGTAGTGGGACTTACACATACTACGCAGACTCACTTCAGGGCCGATTCACCATCGCCAGAGACAACGCCA  180
V  88.3% (218/247)  IGHV3-21*04  137  .......C..................A.T.G.....T................G.GA.................T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  R  S  L  Y  L  Q  V  N  S  L  R  T  E  D  T  G  I  Y  Y  C  A  R  I  K  T  P  E  G  A  
                    Query_2787   181  AGAGGTCTCTGTATCTCCAAGTGAACAGCCTGAGAACCGAGGACACCGGCATATATTATTGTGCGAGGATAAAGACCCCGGAGGGCGCCT  270
V  88.3% (218/247)  IGHV3-21*04  227  ...AC..A........G...A..............G..........G.C.G.G.....C........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  22   ----------------------------------------------------------------------------------------..  23

                                      IMGT--------------------->                              
                                      Y  F  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_2787   271  ATTTCTCGTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  326
D  100.0% (5/5)     IGHD2-21*01  24   ...-----------------------------------------------------  26
J  100.0% (48/48)   IGHJ6*02     12   --------................................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_334657

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         436     2e-124
IGHD6-6*01                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CACAATTCCTC	TATAGCAGCTCGTCC	CCAATTAGCG	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACAATTCCTCTATAGCAGCTCGTCCCCAATTAGCGACTCCTACTACTACAATATGGACGTC	ATQFLYSSSSPISDSYYYNMDV	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	283	4	0	98.6


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_2788     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  98.6% (283/287)  IGHV5-10-1*01  6    .............................................................................G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  D  Y  S  P
                    Query_2788     91   CTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGAATTGATCCTAGTGACTCTTATACCGACTACAGCCC  180
V  98.6% (283/287)  IGHV5-10-1*01  96   ......................................................G........................A..........  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2788     181  GTCCTTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCATCAGCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.6% (283/287)  IGHV5-10-1*01  186  ..........................................................................................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------------------CDR3-IMGT--------------------------->           
                                          M  Y  Y  C  A  T  Q  F  L  Y  S  S  S  S  P  I  S  D  S  Y  Y  Y  N  M  D  V  W  G  Q  G
                    Query_2788     271  CATGTATTACTGTGCGACACAATTCCTCTATAGCAGCTCGTCCCCAATTAGCGACTCCTACTACTACAATATGGACGTCTGGGGCCAAGG  360
V  98.6% (283/287)  IGHV5-10-1*01  276  .................-------------------------------------------------------------------------  292
                                          M  Y  Y  C  A                                                                           
D  100.0% (15/15)   IGHD6-6*01     4    ----------------------------...............-----------------------------------------------  18
J  94.9% (56/59)    IGHJ6*02       4    -----------------------------------------------------...A..........GG.....................  40

                                                              
                                          T  T  V  T  V  S  S 
                    Query_2788     361  GACCACGGTCACCGTCTCCTCA  382
J  94.9% (56/59)    IGHJ6*02       41   ......................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_334650

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AATATGGAACCCCCTGGGCAAAGTGA	TGGCTGGT	TT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAATATGGAACCCCCTGGGCAAAGTGATGGCTGGTTTTACTTTGACCAC	AKNMEPPGQSDGWFYFDH	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  V  S  W  V  R  L  A  P  G  K  G  L  
                    Query_2789   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCGTGAGCTGGGTCCGTCTGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (231/248)  IGHV3-23*01  47   .....................................................A.............C.A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  L  G  G  R  N  T  Y  Y  A  D  F  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2789   91   AGTGGGTCGCATCTATTAGTCTGGGTGGTCGTAACACATACTACGCAGACTTCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (231/248)  IGHV3-23*01  137  ........T..G........GGTA.....G...G.................C......................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  N  T  L  S  L  Q  M  N  S  L  R  T  E  D  T  A  V  Y  Y  C  A  K  N  M  E  P  P  G  Q  
                    Query_2789   181  GAAACACGCTGTCTCTGCAAATGAACAGCCTGAGAACCGAGGACACGGCCGTCTATTACTGTGCGAAAAATATGGAACCCCCTGGGCAAA  270
V  93.1% (231/248)  IGHV3-23*01  227  AG..........A......................G................A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      IMGT--------------------->                                  
                                      S  D  G  W  F  Y  F  D  H  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_2789   271  GTGATGGCTGGTTTTACTTTGACCACTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  330
D  100.0% (8/8)     IGHD6-19*01  12   ----........------------------------------------------------  19
J  95.7% (44/46)    IGHJ4*02     3    --------------.........T....................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_334651

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           313     1e-87
IGHD3-3*01                                                                                            14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGGGTTG	GGAGTGG	AATCTGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGGGTTGGGAGTGGAATCTGGTTGACTTC	ARGGWEWNLVDF	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	131	27	19	5	3	70.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	250	227	20	3	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  V  T  D  N  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_2790   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACCGTGACTGACAACTACATGAGTTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-11*01  47   ................................T.....T.C.G....T..........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><--------CDR2-IMGT--------><------------------------------------------------
                                      E  W  V  S  S  I  G  G  S  G  D  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  
                    Query_2790   91   AGTGGGTTTCATCCATTGGTGGAAGTGGGGACAGTACCATCTACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACG  180
V  90.8% (227/250)  IGHV3-11*01  137  ............A....A..A.T.....T---........A.................................................  223
                                      E  W  V  S  Y  I  S  S  S  G     S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  

                                      ----FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT--
                                      A  K  K  S  L  Y  L  E  M  D  S  L  R  D  E  D  T  A  L  Y  Y  C  A  R  G  G  W  E  W  N  
                    Query_2790   181  CCAAGAAGTCTCTGTATCTGGAAATGGACAGCCTGAGAGACGAGGACACGGCCCTATATTATTGTGCGAGGGGGGGTTGGGAGTGGAATC  270
V  90.8% (227/250)  IGHV3-11*01  224  .......C..A.........C.....A............C.............G.G.....C........--------------------  293
                                      A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                       
D  100.0% (7/7)     IGHD3-3*01   15   -------------------------------------------------------------------------------.......----  21

                                      ---------->                                  
                                      L  V  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2790   271  TGGTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ4*02     7    ---......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_334652

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            341     5e-96
IGHD3-16*01                                                                                           12.2    30   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAA	ATTACCTTT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATTACCTTTTTTGACTTT	ARQITFFDF	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_2791   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACAACCTATTGGATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (233/248)  IGHV3-7*01   47   ..........................................GT.G...........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  A  A  S  I  K  E  D  G  S  E  K  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2791   91   AGTGGGCGGCCAGCATAAAGGAAGATGGAAGTGAGAAGCACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (233/248)  IGHV3-7*01   137  ......T.....A.......C................AT...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  V  F  L  Q  M  K  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  T  F  F  D  F  
                    Query_2791   181  AGAACTCTGTGTTTCTGCAAATGAAGAGCCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGACAAATTACCTTTTTTGACTTTT  270
V  94.0% (233/248)  IGHV3-7*01   227  .......AC...A............C................................C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD3-16*01  9    -----------------------------------------------------------------------.....G...----------  17
J  93.0% (40/43)    IGHJ4*02     6    --------------------------------------------------------------------------------.......AC.  15

                                                                       
                                      W  G  Q  G  T  L  V  A  V  S  S  
                    Query_2791   271  GGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  303
J  93.0% (40/43)    IGHJ4*02     16   ....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_80984

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD6-13*01                                                                                           21.8    0.039 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGAG	AGCAGCAGCTG	AA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGAGCAGCAGCTGAATGACTAC	ARDREQQLNDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2792   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  V  S  S  I  S  S  S  S  S  Y  M  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_2792   91   AGTGCGTCTCATCCATTAGTAGTAGCAGTAGTTACATGTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACGACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  ....G....................T...........A.............................................A......  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  E  Q  Q  L  N  
                    Query_2792   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGAGAGCAGCAGCTGAATG  270
V  98.4% (246/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  7    ---------------------------------------------------------------------------...........----  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2792   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (41/41)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_45445

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           380     1e-107
IGHD2-21*02                                                                                           16.1    2.5   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TTTG	GGTGATGACTG	GGATCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTTTGGGTGATGACTGGGATCAATACTACTTTGACTAC	ASLGDDWDQYYFDY	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	67	4	0	94.4
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	45	6	0	88.2
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	295	5	5	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  N  G  E  S  L  K  I  S  C  R  C  S  G  Y  R  F  T  N  
                    Query_2793   7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGAACGGGGAGTCTCTGAAGATCTCCTGTAGGTGTTCTGGATACAGGTTTACCAATT  96
V  92.0% (266/289)  IGHV5-51*01  5    ...................................CC..........................A.G.............C.......GC.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  L  G  M  M  I  P  G  D  S  D  T  R  Y  S  
                    Query_2793   97   ACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACCTGGGAATGATGATTCCTGGTGACTCTGATACCAGATACAGCC  186
V  92.0% (266/289)  IGHV5-51*01  95   .........G...................................GGA....G..C..CTA.............................  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  P  F  Q  D  Q  V  T  I  S  A  D  E  S  I  S  T  A  Y  L  Q  W  S  S  L  E  P  S  D  T  
                    Query_2793   187  CGCCCTTCCAAGACCAGGTCACCATCTCAGCCGACGAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGCCCTCGGACACCT  276
V  92.0% (266/289)  IGHV5-51*01  185  ..T.........G......................A..........C...........................A..G...........G  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                  
                                      S  M  Y  Y  C  A  S  L  G  D  D  W  D  Q  Y  Y  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_2793   277  CCATGTATTACTGTGCGAGTTTGGGTGATGACTGGGATCAATACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  366
V  92.0% (266/289)  IGHV5-51*01  275  ...................-----------------------------------------------------------------------  293
                                      A  M  Y  Y  C  A                                                                          
D  90.9% (10/11)    IGHD2-21*02  11   -----------------------....G......--------------------------------------------------------  21
J  97.9% (47/48)    IGHJ4*02     1    ------------------------------------------...................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_45444

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            397     8e-113
IGHD3-10*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGAC	TGGTTCGGGGA	CTT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTAC	ARVTGSGTYSFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  G  S  Y
                    Query_2794   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCGGCAGCTA  90
V  93.8% (272/290)  IGHV1-8*02   6    ..................G...............................................................AC......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  D  Y  A  Q
                    Query_2794   91   TGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATGAATCCTAACAGTGGGAACACAGACTATGCACA  180
V  93.8% (272/290)  IGHV1-8*02   96   .........................A..................................C...........T.......G.........  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  Y  M  E  L  S  S  L  G  S  A  D  T  A
                    Query_2794   181  GAAGTTCCGGGGCAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCTACATGGAGCTGAGTAGTCTGGGATCTGCCGACACGGC  270
V  93.8% (272/290)  IGHV1-8*02   186  ........A.......................A...C..C.T........................C..C...A......AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  V  T  G  S  G  T  Y  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2794   271  CGTCTATTACTGTGCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  93.8% (272/290)  IGHV1-8*02   276  ...G................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (11/11)   IGHD3-10*01  10   ------------------------...........---------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    --------------------------------------...A......C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_45447

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           377     8e-107
IGHD5-12*01                                                                                           14.1    8.2   
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGA	TGGCTAC	AATCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGGCTACAATCCTTACTTTGACTAC	ARDDGYNPYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	246	5	0	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2795   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGCTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.0% (246/251)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  L  I  D  T  S 
                    Query_2795   91   CTGGAGTGGATTGGCTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATTAATAGACACGTCT  180
V  98.0% (246/251)  IGHV4-31*03  139  ..............G.............................................................C.G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  D  G  Y  N  P  Y 
                    Query_2795   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGAGATGATGGCTACAATCCTTAC  270
V  98.0% (246/251)  IGHV4-31*03  229  ........................................................T..............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD5-12*01  11   --------------------------------------------------------------------------.......---------  17
J  100.0% (46/46)   IGHJ4*02     3    ---------------------------------------------------------------------------------------...  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2795   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (46/46)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_45446

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           353     9e-100
IGHD2-15*01                                                                                           12.2    32    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAT	TAGCTG	TATCCGCGCCCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTAGCTGTATCCGCGCCCTACTACTTTGACTAC	ARRLAVSAPYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  T  N  S  N  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_2796   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCACCAATAGTAATTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.2% (238/250)  IGHV4-39*01  49   ...............................G........G..G.....G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2796   91   CTGGAGTGGATTGCGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  95.2% (238/250)  IGHV4-39*01  139  .............G..................................................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  V  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  R  L  A  V  S  A  P 
                    Query_2796   181  AAGAACCAGTTCTCCCTGAGGGTGACCTCTGTGACCGCCGCAGACACGGCTCTATATTACTGTGCGAGACGATTAGCTGTATCCGCGCCC  270
V  95.2% (238/250)  IGHV4-39*01  229  ...................A.C...G.........................G.G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-15*01  19   -------------------------------------------------------------------------......-----------  24

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  S  L  V  A  V  S  S  
                    Query_2796   271  TACTACTTTGACTACTGGGGCCAGGGATCCCTGGTCGCCGTCTCCTCAG  319
J  95.8% (46/48)    IGHJ4*02     1    -..........................A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_61022

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*02                                                                                            388     5e-110
IGHD1-26*01                                                                                           10.3    138   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*02	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGTTCTCAAGAT	GTGGG	CTTCTATCTCTCCGC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTTCTCAAGATGTGGGCTTCTATCTCTCCGCTATGGACGTC	ARGGSQDVGFYLSAMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  S  G  A  S  V  R  V  S  C  K  A  S  G  Y  A  F  T  A  Y
                    Query_2797   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGTCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACGCCTTCACCGCCTA  90
V  92.8% (269/290)  IGHV1-2*02   6    ..................G...............C...............A.....................A...A.........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  N  A  N  N  G  G  T  A  Y  A  Q
                    Query_2797   91   CTTTATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGCTGGGATGGATCAACGCTAACAATGGTGGCACAGCCTATGCACA  180
V  92.8% (269/290)  IGHV1-2*02   96   ..A...........................................A..............C......G..........AA.........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  G  D  M  S  I  S  T  A  Y  M  D  L  S  R  L  T  S  D  D  T  A
                    Query_2797   181  GAAGTTTCAGGGCCGGGTCACCATGACCGGGGACATGTCCATCAGCACAGCCTACATGGACTTGAGTAGGCTGACATCTGACGACACGGC  270
V  92.8% (269/290)  IGHV1-2*02   186  .............A..............A......C........................GC....C.......G...............  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  W  A  R  G  G  S  Q  D  V  G  F  Y  L  S  A  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_2797   271  CGTGTATTATTGGGCGAGAGGAGGTTCTCAAGATGTGGGCTTCTATCTCTCCGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  92.8% (269/290)  IGHV1-2*02   276  .........C..T.......----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD1-26*01  7    ----------------------------------.....---------------------------------------------------  11
J  100.0% (43/43)   IGHJ6*02     20   ------------------------------------------------------....................................  55

                                             
                                        S  S 
                    Query_2797   361  CTCCTCA  367
J  100.0% (43/43)   IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_45440

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           397     8e-113
IGHD6-13*01                                                                                           21.8    0.046 
IGHJ4*03                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ4*03	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAGTG	GCAGCAGCTGG	CTA	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGCAGCAGCTGGCTACTACTTTGACTCC	ARGVAAAGYYFDS	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	69	5	0	93.2
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	295	5	5	0	0	100
Total	N/A	N/A	292	273	19	0	93.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  I  K  K  P  G  E  S  L  K  I  S  C  R  G  S  G  Y  R  F  T  
                    Query_2798   4    AGGTTCAGCTGGTGCAGTCTGGAGCAGAAATAAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGGGTTCTGGATACAGGTTTACCA  93
V  93.5% (273/292)  IGHV5-51*03  2    ....G.......................GG.G..................................A...............C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  F  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  M  I  Y  P  R  D  S  E  T  R  Y  
                    Query_2798   94   ACTTCTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATGATCTATCCTCGTGACTCTGAGACCAGATACA  183
V  93.5% (273/292)  IGHV5-51*03  92   G..A...................................................G..C.........G..........T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  N  S  M  N  T  A  H  L  Q  W  S  S  L  R  A  S  D  
                    Query_2798   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAACTCCATGAACACCGCCCACCTGCAGTGGAGCAGTCTGAGGGCCTCGGACA  273
V  93.5% (273/292)  IGHV5-51*03  182  ........................................G.....C.G.......T................C....A...........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  A  I  Y  Y  C  A  R  G  V  A  A  A  G  Y  Y  F  D  S  W  G  Q  G  S  L  V  S  V  S  S  
                    Query_2798   274  CCGCCATTTATTACTGTGCGAGGGGAGTGGCAGCAGCTGGCTACTACTTTGACTCCTGGGGCCAAGGGTCCCTGGTCTCCGTCTCCTCAG  363
V  93.5% (273/292)  IGHV5-51*03  272  .......G..............--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (11/11)   IGHD6-13*01  8    -----------------------------...........--------------------------------------------------  18
J  93.6% (44/47)    IGHJ4*03     2    -------------------------------------------...........A.............A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_45442

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           346     2e-97
IGHD3-3*01                                                                                            21.8    0.046
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGGA	TTTTGGAGTGG	AGGACTCTGGAGTGGTCCGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGGATTTTGGAGTGGAGGACTCTGGAGTGGTCCGCCTTGACTAC	ARVDFGVEDSGVVRLDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	96	18	0	84.2
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	254	33	0	88.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  T  S  G  Y  P  F  R  N  Y 
                    Query_2799   2    CAGCTGGTGCAGTCTGGAGCTGAGGTTAAGAAGCCTGGCGCCTCAGTGAAGGTCGCCTGCAAGACTTCTGGTTACCCCTTTAGGAATTAC  91
V  88.5% (254/287)  IGHV1-18*04  7    ..........................G...........G...............T........G...........A......CC.GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  G  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  E 
                    Query_2799   92   GGTGTCGGTTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGGAACACAAACTATGCAGAG  181
V  88.5% (254/287)  IGHV1-18*04  97   ...A..A.C..........................G.........................C.........T...............C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  F  E  D  R  V  T  M  I  T  H  T  S  T  T  T  V  F  M  E  L  R  G  L  R  Y  D  D  T  A 
                    Query_2799   182  AATTTCGAGGACAGAGTCACAATGATCACACACACCTCCACGACCACAGTGTTCATGGAACTGAGGGGGCTGAGATATGACGACACGGCC  271
V  88.5% (254/287)  IGHV1-18*04  187  ..GC..C...G.........C....C....G....A.......G.....CC.A......G......A.C.......C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------CDR3-IMGT-------------------->                           
                                       V  Y  Y  C  A  R  V  D  F  G  V  E  D  S  G  V  V  R  L  D  Y  W  G  Q  G  A  L  V  S  V 
                    Query_2799   272  GTCTATTACTGTGCGAGGGTGGATTTTGGAGTGGAGGACTCTGGAGTGGTCCGCCTTGACTACTGGGGCCAGGGAGCCCTGGTCAGCGTC  361
V  88.5% (254/287)  IGHV1-18*04  277  ..G..............-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  100.0% (11/11)   IGHD3-3*01   11   -----------------------...........--------------------------------------------------------  21
J  92.9% (39/42)    IGHJ4*02     7    -------------------------------------------------------....................A.........C....  41

                                             
                                       S  S  
                    Query_2799   362  TCGTCAG  368
J  92.9% (39/42)    IGHJ4*02     42   ..C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_8186

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           297     7e-83
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAACA	TATGACT	TATAGCAGT	AGTCCATTA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATATGACTTATAGCAGTAGTCCATTAGACTAC	AKHMTYSSSPLDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	26	26	25	1	0	96.2
CDR1-IMGT	27	56	30	23	7	0	76.7
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	13	8	0	61.9
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  S  L  T  C  A  V  S  G  A  S  V  S  S  G  D  Y  Y  W  G  W  I  R  Q  P  P  G  R  G  
                    Query_2800   1    CCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCGTCAGTAGTGGTGACTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAGGGGGC  90
V  88.0% (220/250)  IGHV4-39*01  50   .................A............G....A....C...A..AGT..................................A.....  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  L  G  S  I  Y  N  T  R  Y  P  Y  Y  S  L  S  L  K  S  R  V  T  I  S  V  D  S  S  
                    Query_2800   91   TGGAGTGGCTTGGGAGTATCTATAATACTAGATATCCCTACTATAGTTTGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACTCGTCCA  180
V  88.0% (220/250)  IGHV4-39*01  140  ........A..............T...G.G.GAGCA.......C.ACCC..................................A......  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  E  F  S  L  G  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  H  M  T  Y  S  S  S  
                    Query_2800   181  AGAACGAGTTCTCCCTGGGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTTTATTTCTGTGCGAAACATATGACTTATAGCAGTAGTC  270
V  88.0% (220/250)  IGHV4-39*01  230  .....C...........AA.................................G....A........G...--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-19*01  4    -----------------------------------------------------------------------------.........----  12

                                      ---------->                                  
                                      P  L  D  Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_2800   271  CATTAGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCTTCAG  315
J  95.0% (38/40)    IGHJ4*02     9    -----.............A.....................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_45448

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           382     3e-108
IGHD4-17*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGGAAT	TACGGTGACTAC	GGACTAACGT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCGGAATTACGGTGACTACGGACTAACGTACTTCTTTGACTAC	AKDRNYGDYGLTYFFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2801   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-30*18  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2801   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  98.8% (247/250)  IGHV3-30*18  137  .............................................C............................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  R  N  Y  G  D  Y  
                    Query_2801   181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTCTGTATTACTGTGCGAAAGACCGGAATTACGGTGACTACG  270
V  98.8% (247/250)  IGHV3-30*18  227  ...A..............................................G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD4-17*01  5    -----------------------------------------------------------------------------............-  16

                                      GT-------------------->                                  
                                      G  L  T  Y  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2801   271  GACTAACGTACTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  97.9% (47/48)    IGHJ4*02     1    ---------...A............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_192278

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           341     5e-96
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	N/A	N/A	CCCCGCATCGCGTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCCGCATCGCGTCTTGACTAC	ARGPASRLDY	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  F  G  G  S  F  R  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_2802   4    CCCTGAGACTCTCCTGCGCTGTCTTTGGTGGGTCCTTCAGGGGGTCCTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  94.7% (231/244)  IGHV4-34*01  50   .....TCC...A............A...............T..T.A............................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  G  R  V  T  I  S  I  D  T  S  K  N  
                    Query_2802   94   GGATTGGGGAAATCAATCATAGTGGAAGCACCAATTACAACCCGTCCCTCAAGGGTCGAGTCACCATATCAATAGACACGTCCAAGAACC  183
V  94.7% (231/244)  IGHV4-34*01  140  ..................................C..................A.................G..................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------CDR3-IMGT--------->    
                                      Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  P  A  S  R  L  D  Y  W  
                    Query_2802   184  AGTTCTCCCTGAAGCTGAGCTCTGTGTCCGCCGCGGACACGGCTGTATATTACTGTGCGAGAGGCCCCGCATCGCGTCTTGACTACTGGG  273
V  94.7% (231/244)  IGHV4-34*01  230  ..........................A...................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
J  97.6% (41/42)    IGHJ4*02     7    ------------------------------------------------------------------------------............  18

                                                                    
                                      G  Q  G  T  L  V  T  A  S  S  
                    Query_2802   274  GCCAGGGAACCCTGGTCACCGCCTCCTCAG  303
J  97.6% (41/42)    IGHJ4*02     19   .....................T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_192279

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           386     1e-109
IGHD2-8*01                                                                                            10.3    132   
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-8*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GATAG	GGAC	AATGG	CTTC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATAGGGACAATGGCTTCCTGGTACTTCGACCTC	AIGTMASWYFDL	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  E  A  S  G  Y  T  F  T  S  F 
                    Query_2803   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCGAGGCTTCTGGTTACACCTTTACCAGTTTT  91
V  92.7% (268/289)  IGHV1-18*01  7    ............................................................A.........................C.A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  T  T  G  Q  G  L  E  W  M  G  W  I  S  V  H  N  G  K  T  D  Y  A  Q 
                    Query_2803   92   GGTATCAGCTGGGTGCGACAGACCACTGGGCAAGGCCTTGAGTGGATGGGGTGGATCAGCGTTCACAATGGCAAGACAGACTATGCACAG  181
V  92.7% (268/289)  IGHV1-18*01  97   .....................G..C....A.....G..............A..........C.T.......T..C...A...........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  L  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  A  A 
                    Query_2803   182  AGTTTACAGGGCAGAGTCACCTTGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACGCGGCC  271
V  92.7% (268/289)  IGHV1-18*01  187  .AGC.C...............A..............................................................A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  I  G  T  M  A  S  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2803   272  GTTTATTACTGTGCGATAGGGACAATGGCTTCCTGGTACTTCGACCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  353
V  92.7% (268/289)  IGHV1-18*01  277  ..G.............G..---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (5/5)     IGHD2-8*01   14   -----------------------.....------------------------------------------------------  18
J  98.0% (49/50)    IGHJ2*01     4    --------------------------------............T.....................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_263448

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-9*01                                                                                            35.3    4e-06
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GC	ATTTCGATCTTTTGACTGGTTATT	CTAGCGGCGACT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATTTCGATCTTTTGACTGGTTATTCTAGCGGCGACTACTACTTTGGCCAC	ARHFDLLTGYSSGDYYFGH	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_2804   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGTAGTTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  92.1% (223/242)  IGHV4-59*01  49   ..................A............G........................C........................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  D  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_2804   91   TGGATTGGATATATGGATTACAGTGGCAGTACCAACTACAATCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAAGAGT  180
V  92.1% (223/242)  IGHV4-59*01  139  ........G.....CT..........G..C...........C.................A............................AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       H  F  T  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  F  D  L  L  T  G  Y  S 
                    Query_2804   181  CACTTCACGCTGAAGGTGAACTCGGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGCATTTCGATCTTTTGACTGGTTATTCT  270
V  92.1% (223/242)  IGHV4-59*01  229  ..G...T.C......C...G...T......................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  91.7% (22/24)    IGHD3-9*01   3    ----------------------------------------------------------------...A....A...............--  26

                                      ----------------------->                                  
                                       S  G  D  Y  Y  F  G  H  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_2804   271  AGCGGCGACTACTACTTTGGCCACTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  328
J  91.7% (44/48)    IGHJ4*02     1    ----------.........A.T..............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_302406

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           300     8e-84
IGHD2-15*01                                                                                           12.2    32   
IGHJ3*01                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGCCG	GGTAGC	GTCC	CTTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATGGGCCGGGTAGCGTCCCTTATGATGTT	VRDGPGSVPYDV	249	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	110	57	45	6	6	78.9
CDR2-IMGT	111	134	24	19	5	0	79.2
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	256	8	6	2	0	75
Total	N/A	N/A	256	226	24	6	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><-----------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  A  S  R  F  S  F  R  S  H  W  M  N  W  L  R  Q  V  P  G  K  G  Q  
                    Query_2805   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTAGATTCAGCTTCAGGAGCCACTGGATGAACTGGCTCCGCCAAGTTCCAGGGAAGGGGCAGG  90
V  88.3% (226/256)  IGHV3-74*01  47   .............................G......C......T...T........C.....G.........C............-----  131
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G     

                                      -------------------><-------CDR2-IMGT------><---------------------------------------------
                                      G  L  V  W  L  S  H  I  N  P  D  G  T  R  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  
                    Query_2805   91   GGCTGGTGTGGCTTTCACATATTAATCCTGATGGGACCAGAACAAATTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACG  180
V  88.3% (226/256)  IGHV3-74*01  132  -..........G.C....G.......AG........GT..C....GC..........................................A  220
                                         L  V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------CDR3-IMG
                                      D  A  K  D  T  L  F  L  Q  M  T  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  G  P  G  S  
                    Query_2805   181  ACGCCAAGGACACGCTGTTTCTGCAAATGACCAGTCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGTGAGAGATGGGCCGGGTAGCG  270
V  88.3% (226/256)  IGHV3-74*01  221  ........A.........A...........A.................................C....CA.....--------------  296
                                      N  A  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                 
D  100.0% (6/6)     IGHD2-15*01  17   -----------------------------------------------------------------------------------......-  22

                                      T------------>                                  
                                      V  P  Y  D  V  W  G  Q  G  I  M  V  T  V  S  P  
                    Query_2805   271  TCCCTTATGATGTTTGGGGCCAAGGGATCATGGTCACCGTGTCTCCAG  318
J  86.7% (39/45)    IGHJ3*01     6    ---...T......C.............CA...........C...T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_192270

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           364     5e-103
IGHD3-3*01                                                                                            39.1    2e-07 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	T	TTACGATTTTTTGAGTGGTTATT	N/A	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATTTACGATTTTTTGAGTGGTTATTACTTC	AIYDFLSGYYF	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	237	4	0	98.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2806   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.3% (237/241)  IGHV4-34*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2806   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTGAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.3% (237/241)  IGHV4-34*01  139  ..................................................C.......................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  L  T  A  A  D  T  A  V  H  Y  C  A  I  Y  D  F  L  S  G  Y  Y  F 
                    Query_2806   181  CAGTTCTCCCTGAAACTGAGCTCTCTGACCGCCGCGGACACGGCTGTGCATTACTGTGCGATTTACGATTTTTTGAGTGGTTATTACTTC  270
V  98.3% (237/241)  IGHV4-34*01  229  ..............G.........G.......................T............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.7% (22/23)    IGHD3-3*01   4    --------------------------------------------------------------...........G...........-----  26
J  97.4% (38/39)    IGHJ4*02     10   -------------------------------------------------------------------------------------...A.  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2806   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  97.4% (38/39)    IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_192271

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-22*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TAAGATATCG	AGTAGTGG	CGTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAAGATATCGAGTAGTGGCGTCGACTAC	ASKISSSGVDY	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  V  G  Y  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_2807   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGTTGGTTACTACTGGACCTGGATCCGCCAGCACCCAGGCAAGGGC  90
V  96.4% (239/248)  IGHV4-31*03  49   ..............................................G..............G.....................G......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S 
                    Query_2807   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCACTAGACAAGTCT  180
V  96.4% (239/248)  IGHV4-31*03  139  ..............................................................................G......C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  R  F  S  L  K  L  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  S  K  I  S  S  S  G  V 
                    Query_2807   181  AAGAACCGGTTCTCCCTGAAGCTGAGCTCTATGACTGCTGCGGACACGGCCGTGTACTACTGTGCGAGTAAGATATCGAGTAGTGGCGTC  270
V  96.4% (239/248)  IGHV4-31*03  229  .......A......................G.......C.................T...........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (8/8)     IGHD3-22*01  14   ------------------------------------------------------------------------------........----  21

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_2807   271  GACTACTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  310
J  97.5% (39/40)    IGHJ4*02     9    ......................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_192272

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           296     2e-82
IGHD2-21*01                                                                                           10.3    117  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCG	GGTGA	AGACAAGCACTATCATTAT	GGTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGGGTGAAGACAAGCACTATCATTATGGTTTGGACGTC	ARDPGEDKHYHYGLDV	230	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	20	4	0	83.3
FR3-IMGT	116	229	114	104	10	0	91.2
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	207	18	0	92


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  N  F  S  D  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  Y
                    Query_2808   13   GTCTGGATTCAACTTCAGTGACTATGGCATCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATTA  102
V  92.0% (207/225)  IGHV3-33*01  72   ...........C.......AG.........G.........................................................G.  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  I  Y  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  K  N  T  V  Y  L  Q  M  Y
                    Query_2808   103  TGGAAGTATTTACAACTATGCAGATTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCAAGAACACGGTTTATCTGCAAATGTA  192
V  92.0% (207/225)  IGHV3-33*01  162  ........A.A.AT..........C.....................A..........................C.G............A.  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-------------------CDR3-IMGT------------------>     
                                        S  L  R  G  D  D  T  A  V  Y  Y  C  A  R  D  P  G  E  D  K  H  Y  H  Y  G  L  D  V  W  G
                    Query_2808   193  CAGCCTCAGAGGCGACGACACGGCTGTCTATTACTGTGCGAGAGATCCGGGTGAAGACAAGCACTATCATTATGGTTTGGACGTCTGGGG  282
V  92.0% (207/225)  IGHV3-33*01  252  ......G....C...G...........G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (5/5)     IGHD2-21*01  14   -------------------------------------------------.....------------------------------------  18
J  97.8% (44/45)    IGHJ6*02     18   -------------------------------------------------------------------------...A.............  34

                                                                  
                                        Q  G  T  T  V  T  V  S  S 
                    Query_2808   283  CCAAGGGACCACGGTCACCGTCTCCTCA  310
J  97.8% (44/45)    IGHJ6*02     35   ............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_192273

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_2809   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  R  S 
                    Query_2809   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAGGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A................A..A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_2809   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACGCGGCCGTGTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  ...................G...................A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2809   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_192274

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           325     3e-91
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	AGTGGC	TACTATGACACTAGTGGT	GACATTCC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGTGGCTACTATGACACTAGTGGTGACATTCCCAACTGGTTCGACCCC	SGYYDTSGDIPNWFDP	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	109	5	0	95.6
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  R  R  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_2810   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCGTCAGCCGTCGTAATTACTATTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  93.0% (225/242)  IGHV4-61*01  50   .....TCC...A.............................A..G...G......C.....C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  R  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  
                    Query_2810   94   TGGAGTGGATTGGATATATCTATTACCGTGGGACCACCAACTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCCA  183
V  93.0% (225/242)  IGHV4-61*01  140  .............G............A......G............C..............................G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  T  Y  Y  C  S  G  Y  Y  D  T  S  G  D  
                    Query_2810   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCACTTATTACTGTAGTGGCTACTATGACACTAGTGGTGACA  273
V  93.0% (225/242)  IGHV4-61*01  230  ..................................................GTG.........----------------------------  291
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                             
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------........T.G.......----  22

                                      T------------------>                                  
                                      I  P  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2810   274  TTCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (50/50)   IGHJ5*02     2    ----..................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_192275

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           346     2e-97
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGTCGTCGAGGGCACACGACATT	TATAGCAGTGGCTGG	GGGAGGCCGGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGTCGTCGAGGGCACACGACATTTATAGCAGTGGCTGGGGGAGGCCGGCTGACTAC	ARASSRAHDIYSSGWGRPADY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  D  S  G  F  T  F  S  S  H  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2811   1    GGTCCCTGAGACTCTCCTGTGCAGACTCTGGATTCACCTTCAGTAGCCACGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-30*03  47   ........................C......................T.T........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  S  Y  E  G  S  T  K  Y  Y  V  D  S  V  K  G  R  F  T  A  S  R  D  N  S  
                    Query_2811   91   AGTGGGTGGCTTTTATATCATATGAAGGAAGTACTAAATACTATGTAGACTCCGTGAAGGGCCGGTTCACCGCCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-30*03  137  ..........AG.............T.......A...........C..................A......AT.................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  A  S  S  R  A  H  D  
                    Query_2811   181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGAGCTGATGACACGGCTGTCTATTACTGTGCGAGAGCGTCGTCGAGGGCACACGACA  270
V  94.4% (235/249)  IGHV3-30*03  227  .......G................................G...........G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      DR3-IMGT-------------------------->                                  
                                      I  Y  S  S  G  W  G  R  P  A  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_2811   271  TTTATAGCAGTGGCTGGGGGAGGCCGGCTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  339
D  100.0% (15/15)   IGHD6-19*01  4    --...............----------------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    ----------------------------..............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_192276

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           304     9e-85
IGHD6-6*01                                                                                            19.9    0.15 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAAAA	AGACTGGG	GTATACCAACTCGTCC	GGGACGAACC	TTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAAAAGACTGGGGTATACCAACTCGTCCGGGACGAACCTTGAATAC	VKRLGYTNSSGTNLEY	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	19	5	0	79.2
FR2-IMGT	51	101	51	51	0	0	100
CDR2-IMGT	102	125	24	22	2	0	91.7
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	245	6	4	2	0	66.7
Total	N/A	N/A	230	212	18	0	92.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  A  F  S  A  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_2812   16   GTGCAGCCTCTGGATTCGCCTTCTCTGCCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATCT  105
V  92.2% (212/230)  IGHV3-30*18  65   .................A.....AG.AG............................................................A.  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  Y  D  G  S  N  R  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  K  T  L  Y  L  
                    Query_2812   106  CATATGATGGAAGTAATAGATTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCAAGAAAACATTGTATCTGC  195
V  92.2% (212/230)  IGHV3-30*18  155  ..................A..A.............................................T........C..GC.........  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  E  S  L  R  T  E  D  T  A  V  Y  Y  C  V  K  R  L  G  Y  T  N  S  S  G  T  N  L  E  
                    Query_2812   196  AAATGGAGAGCCTGAGAACTGAGGACACGGCTGTCTATTACTGTGTAAAAAGACTGGGGTATACCAACTCGTCCGGGACGAACCTTGAAT  285
V  92.2% (212/230)  IGHV3-30*18  245  .....A.C.........G................G..........CG...----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  87.5% (14/16)    IGHD6-6*01   3    ----------------------------------------------------------.....G..G.......----------------  18
J  97.6% (41/42)    IGHJ4*02     7    ------------------------------------------------------------------------------------....C.  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2812   286  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.6% (41/42)    IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_192277

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           442     2e-126
IGHJ5*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	N/A	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TCAGGGGTCGCATCTAGGA	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGGTCGCATCTAGGATGGTTCGACCCC	ARDQGSHLGWFDP	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	287	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_2813   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGGCACCTTCAGCAGCTA  90
V  98.6% (287/291)  IGHV1-69*01  6    ..................................................................T.......................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q
                    Query_2813   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACA  180
V  98.6% (287/291)  IGHV1-69*01  96   ..........................................................................................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  I  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_2813   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCATAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  98.6% (287/291)  IGHV1-69*01  186  ...............................................C..........................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        F  Y  Y  C  A  R  D  Q  G  S  H  L  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2813   271  CTTCTATTACTGTGCGAGAGATCAGGGGTCGCATCTAGGATGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  98.6% (287/291)  IGHV1-69*01  276  .G.G.................-----------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                    
J  100.0% (46/46)   IGHJ5*02     6    ----------------------------------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_290493

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            338     4e-95
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	CGTTCGG	ATGGTTCGGGGAGTT	CCTA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGCGTTCGGATGGTTCGGGGAGTTCCTAGGTATGGACGTC	AKAFGWFGEFLGMDV	239	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	23	1	0	95.8
FR3-IMGT	125	238	114	110	4	0	96.5
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	232	224	8	0	96.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  I  F  K  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 
                    Query_2814   14   TGTGCAGCCTCTGGATTCATCTTTAAAGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATT  103
V  96.6% (224/232)  IGHV3-9*01   64   ...................C....G.T...............................................................  153
                                       C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  W  N  S  G  R  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_2814   104  AGTTGGAATAGTGGTAGGATAGGCTATGCGGATTCTGTGAAGGGCCGATTCACCATCTCAAGAGACAACGCCAAGAACTCCCTGTATCTG  193
V  96.6% (224/232)  IGHV3-9*01   154  .................C..............C..........................C..............................  243
                                       S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-----------------CDR3-IMGT----------------->
                                       Q  M  N  S  L  R  G  E  D  T  A  L  Y  Y  C  A  K  A  F  G  W  F  G  E  F  L  G  M  D  V 
                    Query_2814   194  CAAATGAACAGTCTGCGAGGTGAGGACACGGCCTTGTATTACTGTGCAAAAGCGTTCGGATGGTTCGGGGAGTTCCTAGGTATGGACGTC  283
V  96.6% (224/232)  IGHV3-9*01   244  ...............A...C................................--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                                        
D  100.0% (15/15)   IGHD3-10*01  9    -----------------------------------------------------------...............----------------  23
J  100.0% (45/45)   IGHJ6*02     18   ------------------------------------------------------------------------------............  29

                                                                       
                                       W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2814   284  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  316
J  100.0% (45/45)   IGHJ6*02     30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_290492

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         349     2e-98
IGHD2-21*01                                                                                           10.3    118  
IGHJ2*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD2-21*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TA	GGTGA	AGCCCAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGTGAAGCCCAGTACTGGTACTTCGATCTC	ARVGEAQYWYFDL	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_2815     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTACTCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  95.1% (235/247)  IGHV4-38-2*02  49   ................................................T.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K 
                    Query_2815     91   GAGTGGATTGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAG  180
V  95.1% (235/247)  IGHV4-38-2*02  139  ......................A.........C.........A..............A........................C.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                         N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  G  E  A  Q  Y  W  Y 
                    Query_2815     181  AACCAGTTCTCGTTGAATCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTAGGTGAAGCCCAGTACTGGTAC  270
V  95.1% (235/247)  IGHV4-38-2*02  229  ...........CC....G....G............C..A............................-----------------------  295
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (5/5)     IGHD2-21*01    14   ---------------------------------------------------------------------.....----------------  18
J  98.1% (51/52)    IGHJ2*01       2    ---------------------------------------------------------------------------------.........  10

                                        -------->                                  
                                         F  D  L  W   A  V  A  P  W  S  L  S  P  Q 
                    Query_2815     271  TTCGATCTCTGGG-CCGTGGCACCCTGGTCACTGTCTCCTCAG  312
J  98.1% (51/52)    IGHJ2*01       11   .............G.............................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_290491

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            394     6e-112
IGHD3-16*01                                                                                           12.2    34    
IGHJ3*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GCTTCC	TGGGGG	CCATGAGA	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATC	ARGFLGAMRDGLDI	269	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	154	27	27	0	0	100
FR3-IMGT	155	268	114	109	5	0	95.6
CDR3-IMGT (germline)	269	275	7	7	0	0	100
Total	N/A	N/A	274	263	11	0	96


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  D  T  W  N  W  I  R 
                    Query_2816   2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGATACTTGGAACTGGATCAGG  91
V  96.0% (263/274)  IGHV6-1*01   31   ........G...T.G.......................................................C.G.................  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 
                    Query_2816   92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGGAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGA  181
V  96.0% (263/274)  IGHV6-1*01   121  ................................A.........................................................  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  I  N  P  D  S  S  K  N  Q  F  S  L  Q  L  N  S  V  T  F  E  D  T  A  V  Y  F  C  A 
                    Query_2816   182  ATAACCATTAACCCAGACTCATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTTTCGAGGACACGGCTGTGTATTTCTGTGCA  271
V  96.0% (263/274)  IGHV6-1*01   211  ........C.........A.........................................CC....................A.......  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------------CDR3-IMGT--------------->                                  
                                       R  G  F  L  G  A  M  R  D  G  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2816   272  AGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  344
V  96.0% (263/274)  IGHV6-1*01   301  ....---------------------------------------------------------------------  304
                                       R                                                                       
D  100.0% (6/6)     IGHD3-16*01  17   ----------......---------------------------------------------------------  22
J  95.9% (47/49)    IGHJ3*02     2    ------------------------....C...T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_290490

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD5-12*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCTGCTATCGGATACTTT	GTGGCTACGATT	CGGGTGAGGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTGCTATCGGATACTTTGTGGCTACGATTCGGGTGAGGGCATGGACGTC	ARLCYRILCGYDSGEGMDV	246	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  I  R  S  T  N  F  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_2817   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCATCAGGAGTACTAATTTCTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  95.2% (237/249)  IGHV4-39*01  50   .....TCC...A..................G.........C....G..G..A......................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_2817   94   TGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCA  183
V  95.2% (237/249)  IGHV4-39*01  140  ..........................................................................................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  D  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  C  Y  R  I  L  C  
                    Query_2817   184  AGGACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACTCTGCTATCGGATACTTTGTG  273
V  95.2% (237/249)  IGHV4-39*01  230  ..A...............A.....G............................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD5-12*01  10   ---------------------------------------------------------------------------------------...  12

                                      -IMGT----------------------->                                 
                                      G  Y  D  S  G  E  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2817   274  GCTACGATTCGGGTGAGGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  100.0% (12/12)   IGHD5-12*01  13   .........-----------------------------------------------------  21
J  100.0% (42/42)   IGHJ6*02     21   --------------------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_290497

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     5e-89
IGHD6-19*01                                                                                           12.2    30   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGACGGGT	TGGCTG	CCC	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGACGGGTTGGCTGCCCGACGAC	ARGTGWLPDD	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  G  Y  Y  C  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_2818   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCATCAGTGGTTACTACTGCAACTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAGT  93
V  91.8% (223/243)  IGHV4-59*01  50   .....TCC...A....C.............G..........A..........G.G..................A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  H  I  Y  N  T  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_2818   94   GGATTGGACATATCTACAACACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAACC  183
V  91.8% (223/243)  IGHV4-59*01  140  .......GT.......TT...G.....G.............................................A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------CDR3-IMGT--------->    
                                      Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  T  G  W  L  P  D  D  W  
                    Query_2818   184  AGTTCTCCTTGAACCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGACGGGTTGGCTGCCCGACGACTGGG  273
V  91.8% (223/243)  IGHV4-59*01  230  ........C....G....G............................................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD6-19*01  12   -----------------------------------------------------------------------......-------------  17
J  97.5% (39/40)    IGHJ4*02     9    --------------------------------------------------------------------------------...T......  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_2818   274  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  97.5% (39/40)    IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_290495

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           14.1    8.4  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGACA	GGGGGC	GGTTATGACT	T	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACAGGGGGCGGTTATGACTTACAACTGGTTCGACCCC	ARQGAVMTYNWFDP	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	232	19	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  S  L  Y  Y  W  A  W  I  R  Q  P  P  G  R  G 
                    Query_2819   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTAGTCTTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAGGGGG  90
V  92.4% (232/251)  IGHV4-39*01  49   ...................C............................AG...........G.......................A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  F  S  G  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  P 
                    Query_2819   91   CTGGAGTGGATTGGCACAATCTTTTCTGGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCCTATCCGTGGACACGCCC  180
V  92.4% (232/251)  IGHV4-39*01  139  ..............G.GT....A..A.A......G.....................................A.......A......T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  S  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  G  A  V  M  T  Y 
                    Query_2819   181  AAGAGCCAGTTCTCCCTGAAACTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGCGACAGGGGGCGGTTATGACTTAC  270
V  92.4% (232/251)  IGHV4-39*01  229  ....A...............G......................................C......A....-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-22*01  20   -----------------------------------------------------------------------------......T...---  29
J  100.0% (51/51)   IGHJ5*02     1    ----------------------------------------------------------------------------------------..  2

                                      -------------->                                  
                                       N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2819   271  AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (51/51)   IGHJ5*02     3    .................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_290494

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           369     2e-104
IGHD1-26*01                                                                                           16.1    2.4   
IGHJ1*01                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGAC	GGGAGCTA	TCCCTGGCGACTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGATCGACGGGAGCTATCCCTGGCGACTTC	SRSTGAIPGDF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	288	262	26	0	91


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  F 
                    Query_2820   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCGACTTT  91
V  91.0% (262/288)  IGHV1-18*01  7    ....................................................................................AG..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  T  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  R  A  A  Y  N  A  D  T  K  Y  T  P 
                    Query_2820   92   GGTGTCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGTTGGGATGGAGAGCCGCTTACAATGCTGACACAAAGTATACACCG  181
V  91.0% (262/288)  IGHV1-18*01  97   ...A...G.....................................A.........TCAG...........G.A.......C...G...A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  L  T  L  T  T  D  S  S  T  S  T  A  Y  L  D  L  R  S  L  R  S  D  D  T  A 
                    Query_2820   182  AAACTCCAGGGCAGACTCACCTTGACCACCGACTCATCCACGAGCACAGCCTACTTGGACTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  91.0% (262/288)  IGHV1-18*01  187  ..G............G.....A.......A...A....................A....GC.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       L  Y  Y  C  S  R  S  T  G  A  I  P  G  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2820   272  CTTTATTACTGTTCGAGATCGACGGGAGCTATCCCTGGCGACTTCTGGGGCCAGGGCACCCTCGTCACCGTCTCCTCAG  350
V  91.0% (262/288)  IGHV1-18*01  277  G.G.........G.....-------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                              
D  100.0% (8/8)     IGHD1-26*01  9    -----------------------........------------------------------------------------  16
J  97.1% (34/35)    IGHJ1*01     18   --------------------------------------------..................G................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_40547

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATGATC	GTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATCGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDRGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_2821   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAGTTA  90
V  94.8% (276/291)  IGHV5-51*01  6    .................................................................G.....................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  I  M  Y  P  D  D  S  D  I  R  Y  S  P
                    Query_2821   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATCGGCATCATGTATCCTGATGACTCTGATATCAGATACAGCCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ........G.......................................G..G.....C.......G...........C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  G  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  A
                    Query_2821   181  GTCTTTCGAGGGCCAGGTCACCATCTCAGCCGACAAGTCCATCGGCACCGCCTACCTGCAGTGGAGGAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  ...C...C.A.................................A......................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  F  C  A  R  H  G  D  D  R  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  P  G  T  T  V
                    Query_2821   271  CATATATTTCTGTGCGAGACATGGGGATGATCGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCCGGGGACCACGGT  360
V  94.8% (276/291)  IGHV5-51*01  276  ...G....A............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  90.9% (10/11)    IGHD1-26*01  7    --------------------------------.......C...-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------.......A.......................AA...........  49

                                                   
                                        T  V  S  S 
                    Query_2821   361  CACCGTCTCCTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_40546

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           335     4e-94
IGHD6-19*01                                                                                           12.2    32   
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-19*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCTTG	GCACTGGCT	CCTCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATCGCTTGGCACTGGCTCCTCGTGCTTTCGATGTC	TRDRLALAPRAFDV	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	235	21	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  G  D  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2822   1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCAATTTTGGTGATTATGCTATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  91.8% (235/256)  IGHV3-49*04  47   ....................................CC...................G.....................G..........  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  L  G  F  I  R  T  T  A  Y  G  A  T  T  E  Y  A  A  S  V  E  D  R  L  T  I  S  R  D  
                    Query_2822   91   AGTGGTTAGGTTTCATAAGAACAACAGCTTATGGTGCGACAACAGAGTATGCCGCGTCTGTGGAGGACAGACTCACCATCTCAAGAGATG  180
V  91.8% (235/256)  IGHV3-49*04  137  .....G..........T....GC.A...........G.........A..C............A.A.G....T..................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  T  R  D  R  L  A  L  
                    Query_2822   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAGAGTGAAGACACAGCCGTGTATTATTGTACTAGAGATCGCTTGGCACTGG  270
V  91.8% (235/256)  IGHV3-49*04  227  ........................................A.CC..G.................C...........--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  88.9% (8/9)      IGHD6-19*01  8    -----------------------------------------------------------------------------------...G...  14

                                      IMGT--------------->                                  
                                      A  P  R  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2822   271  CTCCTCGTGCTTTCGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
D  88.9% (8/9)      IGHD6-19*01  15   ..----------------------------------------------------  16
J  97.9% (46/47)    IGHJ3*01     4    -------......T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_290499

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*03                                                                                           296     2e-82
IGHD3-22*01                                                                                           23.8    0.012
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TAGTCCGAAAACCGCTGGGA	TATGACTATGAGAGTAGCGGT	GA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTAGTCCGAAAACCGCTGGGATATGACTATGAGAGTAGCGGTGATGACTAC	AKVVRKPLGYDYESSGDDY	261	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	102	54	50	1	3	92.6
CDR2-IMGT	103	146	39	20	4	15	51.3
FR3-IMGT	147	260	114	105	9	0	92.1
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	232	17	18	86.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><-------------------FR2-IMGT---------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_2823   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTTAGTAACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  86.9% (232/267)  IGHV3-23*03  47   ....................G......................C.G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -----------><-----------------CDR2-IMGT----------------><---------------------------------
                                      E  W  V  S  G  I  T  S  R  G  G  S  S  G  G  G  G  G  T  Y  Y  A  D  S  V  K  G  R  F  T  
                    Query_2823   91   AGTGGGTCTCAGGCATTACTAGTAGGGGTGGTAGTAGTGGAGGGGGTGGCGGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCA  180
V  86.9% (232/267)  IGHV3-23*03  137  ............---...T.TA...C...........---------------.........T............................  208
                                      E  W  V  S     V  I  Y  S  G  G  S  S                 T  Y  Y  A  D  S  V  K  G  R  F  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  R  D  N  S  K  N  T  L  F  L  L  M  E  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  V  
                    Query_2823   181  TCTCCAGAGACAATTCCAAGAACACACTGTTTCTGCTAATGGAGAGCCTGAGAGTCGAGGACACGGCCGTCTATTACTGTGCGAAAGTAG  270
V  86.9% (232/267)  IGHV3-23*03  209  ..........T..............G....A.....A....A.C..........C...............A................---  295
                                      I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K     

                                      --------------CDR3-IMGT----------------------->                                
                                      V  R  K  P  L  G  Y  D  Y  E  S  S  G  D  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2823   271  TCCGAAAACCGCTGGGATATGACTATGAGAGTAGCGGTGATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  349
D  85.7% (18/21)    IGHD3-22*01  2    -----------------...T.......T.....T...-----------------------------------------  22
J  100.0% (39/39)   IGHJ4*02     8    ----------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_40544

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           338     5e-95
IGHD7-27*01                                                                                           18.0    0.63 
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCGACTTGAAC	AACTGGGGA	TGGGCAGGGGAGGGTGTTTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCGACTTGAACAACTGGGGATGGGCAGGGGAGGGTGTTTATGATGTC	ATDLNNWGWAGEGVYDV	261	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	22	2	0	91.7
FR2-IMGT	75	125	51	46	5	0	90.2
CDR2-IMGT	126	146	21	16	5	0	76.2
FR3-IMGT	147	260	114	104	10	0	91.2
CDR3-IMGT (germline)	261	264	4	4	0	0	100
Total	N/A	N/A	264	240	24	0	90.9


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  S  V  S  G  A  S  I  S  R  Y  Y  W  N  W  I  R  
                    Query_2824   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCAGTGTCTCTGGTGCCTCCATCAGTCGTTACTACTGGAACTGGATCCGGC  90
V  90.9% (240/264)  IGHV4-59*01  26   ................T.........................C...........G..........A............G...........  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  A  M  E  W  I  G  Y  T  Y  H  T  G  D  T  D  Y  N  P  S  L  R  N  R  V  A  
                    Query_2824   91   AGCCCCCAGGGAAGGCAATGGAGTGGATCGGATATACCTATCACACTGGGGACACCGACTACAACCCCTCCCTCAGGAATCGAGTCGCCA  180
V  90.9% (240/264)  IGHV4-59*01  116  ...............G.C..........T..G....T....T...G....AG....A..................A..G.......A...  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  M  D  A  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  D  
                    Query_2824   181  TATCAATGGACGCGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACGGCTGCGGACACGGCCGTATACTACTGTGCGACCGACT  270
V  90.9% (240/264)  IGHV4-59*01  206  .....G.A...A........................................C.................G..T..........------  289
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A        

                                      -----------CDR3-IMGT-------------------->                                  
                                      L  N  N  W  G  W  A  G  E  G  V  Y  D  V  W  G  Q  G  R  M  V  T  V  S  S  
                    Query_2824   271  TGAACAACTGGGGATGGGCAGGGGAGGGTGTTTATGATGTCTGGGGCCAAGGGAGAATGGTCACCGTCTCTTCAG  345
D  100.0% (9/9)     IGHD7-27*01  3    -----.........-------------------------------------------------------------  11
J  97.6% (40/41)    IGHJ3*01     10   ----------------------------------....................C....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_40542

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           327     9e-92
IGHD1-26*01                                                                                           12.2    32   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTAGACCA	AGTGGG	GCTGCGGGGGAACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTAGACCAAGTGGGGCTGCGGGGGAACAACTTTGACTAC	ARHVDQVGLRGNNFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	230	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  L  G  R  Y  Y  W  G  W  L  R  Q  P  P  G  K  G 
                    Query_2825   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACCCTTGGAAGATACTATTGGGGCTGGCTCCGCCAGCCCCCCGGGAAGGGG  90
V  91.6% (230/251)  IGHV4-39*01  49   ...............................G........G.AG.A.T..T.....C.........A.............A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  H  Y  S  G  S  P  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2825   91   CTGGAGTGGATTGCGAGTATTCATTACAGTGGGAGCCCCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCCGTAGACACGTCC  180
V  91.6% (230/251)  IGHV4-39*01  139  .............G......CT....T.........A.....................................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  H  F  S  L  R  L  R  S  V  T  A  S  D  T  A  V  Y  Y  C  A  R  H  V  D  Q  V  G  L 
                    Query_2825   181  AAGAACCACTTCTCCCTGAGGCTGAGGTCTGTGACCGCCTCAGACACGGCTGTATATTACTGTGCGAGACATGTAGACCAAGTGGGGCTG  270
V  91.6% (230/251)  IGHV4-39*01  229  ........G..........A......C............G.............G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-26*01  6    --------------------------------------------------------------------------------......----  11

                                      GT------------------>                                  
                                       R  G  N  N  F  D  Y  W  G  Q  G  S  L  A  T  V  S  S  
                    Query_2825   271  CGGGGGAACAACTTTGACTACTGGGGCCAGGGAAGTCTGGCCACCGTCTCCTCAG  325
J  93.3% (42/45)    IGHJ4*02     4    ----------........................CC....T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_40540

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           366     2e-103
IGHD1-7*01                                                                                            16.1    2.5   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ACTGGAAATAC	ATAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTC	ARDRTGNTYYGLDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	16	8	0	66.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	262	28	0	90.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  N  D 
                    Query_2826   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTATACTTTCAGTAATGAT  91
V  90.3% (262/290)  IGHV1-18*01  7    ...............................A.................................T........C..C..T.CC.GCT..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  S  F  N  G  N  T  I  Y  A  Q 
                    Query_2826   92   GGTATTAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCTCTTTCAATGGAAACACAATCTACGCACAG  181
V  90.3% (262/290)  IGHV1-18*01  97   .....C............................................A.........G...A......T.......A...T......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  M  T  T  E  T  S  T  T  T  A  Y  M  E  L  R  S  L  T  Y  D  D  T  A 
                    Query_2826   182  AATTTACAGGGCAGAGTTACCATGACCACAGAAACTTCTACGACCACAGCCTACATGGAGCTGAGGAGCCTGACATATGACGACACGGCC  271
V  90.3% (262/290)  IGHV1-18*01  187  ..GC.C...........C..............C..A..C....G.............................G..C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                 
                                       V  Y  F  C  A  R  D  R  T  G  N  T  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2826   272  GTGTATTTCTGTGCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  358
V  90.3% (262/290)  IGHV1-18*01  277  .......A............-------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                      
D  90.9% (10/11)    IGHD1-7*01   7    ------------------------.......C...----------------------------------------------------  17
J  95.8% (46/48)    IGHJ6*02     15   ---------------------------------------......A....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_313721

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           286     1e-79
IGHD3-10*01                                                                                           10.3    113  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	230	265	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	18	6	0	75
FR3-IMGT	116	229	114	105	9	0	92.1
CDR3-IMGT (germline)	230	236	7	7	0	0	100
Total	N/A	N/A	223	203	20	0	91


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  E  W  V  S  S  I  S  T  T 
                    Query_2827   14   TCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTACTACT  103
V  91.0% (203/223)  IGHV3-21*01  73   ..................AG.....G....A..............G.......................................G..G.  162
                                       S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       S  E  F  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  K  N  S  L  F  L  Q  M  N 
                    Query_2827   104  AGTGAGTTCATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCAAGAACTCACTGTTTCTGCAGATGAAC  193
V  91.0% (203/223)  IGHV3-21*01  163  ...AGT.A......C...G..........................A.......A......................A......A......  252
                                       S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><-------------CDR3-IMGT------------>                  
                                       S  L  S  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  F  D  L  W  G  Q  G  T  M 
                    Query_2827   194  AGCCTGAGCGCCGAGGACACGGCTCTCTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTCTGGGGCCAGGGGACAATG  283
V  91.0% (203/223)  IGHV3-21*01  253  ........A...............G.G................-----------------------------------------------  295
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  100.0% (5/5)     IGHD3-10*01  14   ------------------------------------------------.....-------------------------------------  18
J  96.0% (48/50)    IGHJ3*01     1    --------------------------------------------------------.............G..........A.........  34

                                                      
                                       V  T  V  S  S  
                    Query_2827   284  GTCACCGTCTCTTCAG  299
J  96.0% (48/50)    IGHJ3*01     35   ................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_211436

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           324     7e-91
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  A  L  E 
                    Query_2828   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGCACTGGAG  90
V  92.2% (226/245)  IGHV4-59*08  49   ...........................................G......................................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  F  Y  T  G  T  T  N  Y  D  P  S  L  K  S  R  L  T  I  S  V  D  T  S  K  N 
                    Query_2828   91   TGGATCGGGTCTATCTTTTACACTGGGACCACCAACTACGACCCCTCTCTCAAGAGTCGACTCACCATTTCAGTGGACACGTCCAAGAAC  180
V  92.2% (226/245)  IGHV4-59*08  139  .....T....A.....A.....G.....G..........A.......C............G.......A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  G  V  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  H  R  A  A  A  G  P 
                    Query_2828   181  CAGTTCTCCCTGGGAGTGACCTCTCTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATCCCCATAGAGCAGCAGCTGGCCCC  270
V  92.2% (226/245)  IGHV4-59*08  229  ............AAGC...G....G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD6-13*01  7    --------------------------------------------------------------------------............----  18
J  93.2% (41/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_2828   271  TTTGACAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  313
J  93.2% (41/44)    IGHJ4*02     6    ......T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_211434

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           336     1e-94
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	C	GGGACTTATGC	CAACTCGCCA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGACTTATGCCAACTCGCCATACTGGTACTTCGATCTC	ASGTYANSPYWYFDL	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  D  S  I  G  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_2829   4    CCCTGAGACTCTCCTGCAGTGTCTCTGGTGACTCCATCGGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  93.5% (231/247)  IGHV4-39*02  50   .....TCC...A......C...........G.......A...................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  A  S  I  Y  Y  T  G  S  A  Y  H  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  
                    Query_2829   94   TGGAGTGGATTGCGAGTATCTATTATACTGGGAGCGCCTACCACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCCA  183
V  93.5% (231/247)  IGHV4-39*02  140  ............G..............G.......A.....T...............................A................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      N  N  H  F  S  L  Q  L  S  S  V  T  D  A  D  T  A  V  Y  Y  C  A  S  G  T  Y  A  N  S  P  
                    Query_2829   184  ACAACCACTTCTCCCTGCAGCTGAGCTCTGTGACCGACGCAGACACGGCTGTCTATTACTGTGCGAGCGGGACTTATGCCAACTCGCCAT  273
V  93.5% (231/247)  IGHV4-39*02  230  .G...............A..................C...............G..............-----------------------  296
                                      K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  90.9% (10/11)    IGHD3-16*01  20   --------------------------------------------------------------------....G......-----------  30
J  100.0% (52/52)   IGHJ2*01     2    -----------------------------------------------------------------------------------------.  2

                                      ---------------->                                  
                                      Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2829   274  ACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
J  100.0% (52/52)   IGHJ2*01     3    ...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_211435

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2830   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_2830   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_2830   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2830   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_211432

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD2-15*01                                                                                           21.8    0.041
IGHJ3*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGG	GGATATAGTAGTGG	CTGCTGCCACCGTTC	TTGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGGGATATAGTAGTGGCTGCTGCCACCGTTCTTGCTGTC	ARDQGDIVVAAATVLAV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  G  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_2831   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTGGTTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ......................................C...A...A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  F  Y  S  E  S  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  A  S  K  K 
                    Query_2831   91   TGGATTGGGCATATCTTTTACAGCGAGAGTACCAGCTATAACCCCTCCCTCAAGAGTCGAGTCACTATATCAGTAGACGCGTCCAAGAAG  180
V  93.1% (228/245)  IGHV4-59*01  139  .........T......A......T.G...C....A...C..........................C............A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  G  D  I  V  V  A  A 
                    Query_2831   181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATCAGGGGGATATAGTAGTGGCTGCT  270
V  93.1% (228/245)  IGHV4-59*01  229  ...................GC..........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD2-15*01  2    -----------------------------------------------------------------------......T.......-----  15

                                      ----------------->                                  
                                       A  T  V  L  A  V  W  G  Q  G  T  K  V  T  V  S  S  
                    Query_2831   271  GCCACCGTTCTTGCTGTCTGGGGCCAAGGGACAAAGGTCACCGTCTCTTCAG  322
J  95.2% (40/42)    IGHJ3*01     9    ----------...A....................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_211433

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD3-9*01                                                                                            23.8    0.012 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTTTAAG	CGATATTTTGAC	CGGGGAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTAAGCGATATTTTGACCGGGGAGACTTTGACTTG	ARHFKRYFDRGDFDL	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	277	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  
                    Query_2832   3    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACAGCTTTACTA  92
V  93.9% (277/295)  IGHV5-51*01  2    ....G............................................................A......................C.  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      R  Y  W  I  G  W  A  R  Q  M  S  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  V  K  Y  
                    Query_2832   93   GATATTGGATCGGCTGGGCGCGCCAGATGTCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATGTTAAATACA  182
V  93.9% (277/295)  IGHV5-51*01  92   .C..C.............T..........C.......................................G..........ACC.G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  Q  G  Q  V  T  L  S  A  D  K  S  I  S  T  A  Y  L  Q  W  N  R  L  K  A  S  D  
                    Query_2832   183  ACCCGTCCTTCCAAGGCCAGGTCACCCTTTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAACAGGCTGAAGGCCTCGGACA  272
V  93.9% (277/295)  IGHV5-51*01  182  G.........................A.C........................................G...C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  I  Y  Y  C  A  R  H  F  K  R  Y  F  D  R  G  D  F  D  L  W  G  Q  G  T  L  V  T  V  
                    Query_2832   273  CCGCCATATATTACTGTGCGAGACATTTTAAGCGATATTTTGACCGGGGAGACTTTGACTTGTGGGGCCAGGGAACCCTGGTCACCGTCT  362
V  93.9% (277/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD3-9*01   7    --------------------------------............----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    ---------------------------------------------------.........AC............................  42

                                            
                                      S  S  
                    Query_2832   363  CCTCAG  368
J  95.6% (43/45)    IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_211430

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           416     2e-118
IGHD1-26*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCGTTTTC	TGGGACCTACTAC	CTTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGTTTTCTGGGACCTACTACCTTCTTGACTAC	ARAFSGTYYLLDY	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	68	3	0	95.8
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	111	3	0	97.4
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  T  A  F  G  Y  S  F  T  S  
                    Query_2833   7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTACGGCTTTTGGATACAGCTTTACCAGTT  96
V  95.9% (278/290)  IGHV5-51*03  5    ...............................................................A..G..C..................C.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  R  D  G  E  T  R  Y  S  
                    Query_2833   97   ATTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTCGTGACGGTGAAACCAGATACAGCC  186
V  95.9% (278/290)  IGHV5-51*03  95   .C...............................................................G.....TC...T.............  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  
                    Query_2833   187  CGTCCTTCCAAGGCCAGGTCAGCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCG  276
V  95.9% (278/290)  IGHV5-51*03  185  .....................C....................................................A...............  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><--------------CDR3-IMGT-------------->                                
                                      A  M  Y  Y  C  A  R  A  F  S  G  T  Y  Y  L  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2833   277  CCATGTATTATTGTGCGAGAGCGTTTTCTGGGACCTACTACCTTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  361
V  95.9% (278/290)  IGHV5-51*03  275  ..........C.........-----------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                  
D  92.3% (12/13)    IGHD1-26*01  8    ----------------------------.....G.......--------------------------------------------  20
J  100.0% (40/40)   IGHJ4*02     7    ---------------------------------------------........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_211438

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           300     8e-84
IGHD5-18*01                                                                                           18.0    0.60 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	218	26	0	89.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_2834   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  89.3% (218/244)  IGHV4-59*01  50   .....TCC...A....C.............G........G.AGT.A......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S  
                    Query_2834   94   GGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGCC  183
V  89.3% (218/244)  IGHV4-59*01  140  .......G......T..........G.GC.............................A.T.A....A...................A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F  
                    Query_2834   184  AGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTTG  273
V  89.3% (218/244)  IGHV4-59*01  230  .............G.....C..................A.......G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------------------------.......C.G..A..  15

                                      ------------------->                                  
                                      G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2834   274  GTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  83.3% (15/18)    IGHD5-18*01  16   ...---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    -----.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_313720

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           333     1e-93
IGHD2-15*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGTC	TGGTGGAAGC	CGGCACTCCGCTTTGGCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTCTGGTGGAAGCCGGCACTCCGCTTTGGCTC	ARGGLVEAGTPLWL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  Y  G  M  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_2835   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTAGTTATGGCATGCAGTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  92.8% (231/249)  IGHV3-30*03  47   ....................................C.........C...........C..........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  F  K  F  Y  A  D  S  V  K  G  R  F  N  I  S  R  D  N  S  
                    Query_2835   91   AGTGGGTGGCAGTTATTTCATATGATGGCAGTTTTAAATTCTATGCAGACTCCGTGAAGGGCCGATTCAACATCTCCAGAGACAATTCCA  180
V  92.8% (231/249)  IGHV3-30*03  137  ................A...........A...AA.....A.............................C....................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  F  Q  M  N  S  L  R  S  E  D  T  G  V  Y  Y  C  A  R  G  G  L  V  E  A  G  
                    Query_2835   181  AGAACACACTTTATTTTCAAATGAACAGCCTGAGAAGTGAGGACACTGGTGTGTATTACTGTGCGAGAGGGGGTCTGGTGGAAGCCGGCA  270
V  92.8% (231/249)  IGHV3-30*03  227  .......G..G...C.G..................GC.........G.C....................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD2-15*01  13   ---------------------------------------------------------------------------......T...-----  22

                                      ------------->                                  
                                      T  P  L  W  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2835   271  CTCCGCTTTGGCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (35/35)   IGHJ4*02     14   -------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_315493

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*10                                                                                           294     7e-82
IGHD1-26*01                                                                                           12.2    35   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*10	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTCTGGATCTCT	TGGGAG	GCGACAC	TGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCTGGATCTCTTGGGAGGCGACACTGACGAC	ATLDLLGGDTDD	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	64	5	0	92.8
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	42	9	0	82.4
CDR2-IMGT	146	169	24	16	8	0	66.7
FR3-IMGT	170	283	114	94	20	0	82.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	286	237	49	0	82.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  R  A  T  F  S  S  N 
                    Query_2836   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGACTTCCAGGGCCACCTTCAGCAGCAAC  91
V  82.9% (237/286)  IGHV1-69*10  7    .................G.....................T.............C.........G....TG.A.G.............T.T  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       T  F  T  W  V  R  Q  A  S  G  Q  G  L  E  W  M  G  A  I  I  P  T  L  R  T  T  N  Y  A  Q 
                    Query_2836   92   ACCTTCACTTGGGTGCGCCAGGCCTCGGGACAAGGGCTTGAGTGGATGGGGGCCATCATCCCCACCCTGCGCACGACAAACTACGCACAG  181
V  82.9% (237/286)  IGHV1-69*10  97   G.TA...GC........A......C.T.......................A.GG........T.T...TG.T.TAG..............  186
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  L  G  I  A  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  F  Q  G  R  V  T  I  T  A  D  R  S  S  S  T  S  Y  M  G  L  S  G  L  T  P  E  D  T  A 
                    Query_2836   182  AGGTTCCAAGGCAGAGTCACCATAACCGCGGACAGGTCTTCGAGTACAAGTTATATGGGACTGAGCGGTCTGACTCCTGAGGACACGGCC  271
V  82.9% (237/286)  IGHV1-69*10  187  .A......G...........G..T..........AA..CA....C...GCC..C....AG......A.C....GAT..............  276
                                       K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  T  L  D  L  L  G  G  D  T  D  D  W  G  P  G  T  L  V  T  V  S  S  
                    Query_2836   272  GTGTATTACTGTGCGACTCTGGATCTCTTGGGAGGCGACACTGACGACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  353
V  82.9% (237/286)  IGHV1-69*10  277  ................------------------------------------------------------------------  292
                                       V  Y  Y  C  A                                                                    
D  100.0% (6/6)     IGHD1-26*01  8    ----------------------------......------------------------------------------------  13
J  95.1% (39/41)    IGHJ4*02     8    -----------------------------------------....T.........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_315492

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           391     5e-111
IGHD3-10*01                                                                                           46.8    1e-09 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGCTTCAGAC	TACTATGGTTCGGGGAGTTATTAT	N/A	TACAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGCTTCAGACTACTATGGTTCGGGGAGTTATTATTACATTGACTAC	ARVASDYYGSGSYYYIDY	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	250	0	0	100


Alignments

                                       <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                        T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                     Query_2837   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  100.0% (250/250)  IGHV4-61*01  49   ..........................................................................................  138
                                        T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                       -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                     Query_2837   91   CTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  100.0% (250/250)  IGHV4-61*01  139  ..........................................................................................  228
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                       --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  A  S  D  Y  Y  G 
                     Query_2837   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTTGCTTCAGACTACTATGGT  270
V  100.0% (250/250)  IGHV4-61*01  229  ......................................................................--------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (24/24)    IGHD3-10*01  5    ---------------------------------------------------------------------------------.........  13

                                       -IMGT--------------------->                                  
                                        S  G  S  Y  Y  Y  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_2837   271  TCGGGGAGTTATTATTACATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  100.0% (24/24)    IGHD3-10*01  14   ...............----------------------------------------------  28
J  97.8% (45/46)     IGHJ4*02     3    ---------------...T..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_315491

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     8e-121
IGHD6-19*01                                                                                           16.1    2.5   
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGTGGGGAAACAGA	AGTGGCTG	CCA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCC	ARLRGETEVAANNWFDP	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	280	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  V  S  C  M  G  S  G  Y  T  F  A  G  Y
                    Query_2838   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGGTCTCCTGTATGGGATCTGGATACACCTTTGCCGGCTA  90
V  96.9% (280/289)  IGHV5-51*03  6    ....................................................A.........A...T..........G....A..A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_2838   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.9% (280/289)  IGHV5-51*03  96   ........G..............................................A..................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2838   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (280/289)  IGHV5-51*03  186  .......................................C..................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  L  R  G  E  T  E  V  A  A  N  N  W  F  D  P  W  G  Q  G  T  L  V  T  V
                    Query_2838   271  CATGTATTACTGTGCGAGACTTCGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGT  360
V  96.9% (280/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD6-19*01  10   ------------------------------------........----------------------------------------------  17
J  100.0% (50/50)   IGHJ5*02     1    -----------------------------------------------...........................................  43

                                             
                                        S  S 
                    Query_2838   361  CTCCTCA  367
J  100.0% (50/50)   IGHJ5*02     44   .......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_279172

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           349     2e-98
IGHD5-18*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTAC	GTGGATACAG	ATC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTACGTGGATACAGATCCTACTTTGACTCC	ARLRGYRSYFDS	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	233	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2839   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTTCTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.9% (233/243)  IGHV4-34*01  49   ..............................................A...........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  T  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_2839   91   TGGATTGCAGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCACGAGTCGGGTCACCGTATCAGTAGACACGTCCAAGAAC  180
V  95.9% (233/243)  IGHV4-34*01  139  .......GG...........................................A......A......A.......................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  R  G  Y  R  S  Y  F  D 
                    Query_2839   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACCGCTTTATATTACTGTGCGAGATTACGTGGATACAGATCCTACTTTGAC  270
V  95.9% (233/243)  IGHV4-34*01  229  .............A...........................G...G.G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD5-18*01  1    -------------------------------------------------------------------..........-------------  10
J  91.3% (42/46)    IGHJ4*02     2    --------------------------------------------------------------------------------..........  11

                                      -->                                 
                                       S  W  G  R  G  T  L  V  T  V  S  S 
                    Query_2839   271  TCCTGGGGCCGGGGCACCCTGGTCACCGTCTCGTCA  306
J  91.3% (42/46)    IGHJ4*02     12   .A........A...A.................C...  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_279174

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           343     2e-96
IGHD2-21*01                                                                                           10.3    124  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTC	GTGAT	CGGTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCGTGATCGGTGACTACTTTGACCAA	ARHVVIGDYFDQ	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  D  A  S  I  S  S  S  R  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_2840   1    ACCCTGTCCCTCACCTGCACTGTCTCTGATGCCTCCATCAGCAGTAGTAGATACTATTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.6% (235/251)  IGHV4-39*01  49   ............................G..G..................T.....C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  H  I  G  S  T  F  Y  K  Q  S  L  K  T  R  V  T  I  S  I  D  S  S 
                    Query_2840   91   CTGGAGTGGATTGGGAGTATTTATCATATTGGGAGCACCTTCTACAAACAGTCCCTCAAGACTCGAGTCACCATATCCATAGACTCGTCC  180
V  93.6% (235/251)  IGHV4-39*01  139  ....................C...T...G...........A......C.C...........G................G.....A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  H  V  V  I  G  D  Y 
                    Query_2840   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTATATATTACTGTGCGAGACATGTCGTGATCGGTGACTAC  270
V  93.6% (235/251)  IGHV4-39*01  229  ...................A...............................G.G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD2-21*01  15   ---------------------------------------------------------------------------.....----------  19
J  93.8% (45/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2840   271  TTTGACCAATGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  313
J  93.8% (45/48)    IGHJ4*02     6    ......T.C...........A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_279177

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     1e-109
IGHD1-1*01                                                                                            14.1    9.4   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GGGAGGGGG	CAACTGG	GAACCCTTTAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTAC	ARGGGNWEPFTY	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	46	5	0	90.2
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	295	5	4	1	0	80
Total	N/A	N/A	293	270	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T 
                    Query_2841   3    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACC  92
V  92.2% (270/293)  IGHV5-51*01  1    .....G........G.......................................................G............C......  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       A  Y  W  L  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  I  V  F  P  D  D  S  D  T  R  Y 
                    Query_2841   93   GCCTACTGGCTCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGATCGTTTTTCCTGATGACTCTGATACCAGATAC  182
V  92.2% (270/293)  IGHV5-51*01  91   AG.......A.............C..G.........A..........G............A.C.A.....G...................  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  S  F  E  G  H  I  T  I  S  A  D  K  S  I  T  T  A  F  L  Q  W  N  S  L  K  A  S  D 
                    Query_2841   183  AGCCCGTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCACCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGAC  272
V  92.2% (270/293)  IGHV5-51*01  181  ............C.......GG...........................G........A...........G...................  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  I  Y  Y  C  A  R  G  G  G  N  W  E  P  F  T  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2841   273  ACCGCCATCTATTACTGTGCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  92.2% (270/293)  IGHV5-51*01  271  ........G...........G..-----------------------------------------------------------------  293
                                       T  A  M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    --------------------------------.......-------------------------------------------------  11
J  100.0% (38/38)   IGHJ4*02     11   --------------------------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_315494

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            388     5e-110
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAAAGCGGCCGCTT	ATAGTAGTGGTTATTACT	CCCTGACTGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAAAGCGGCCGCTTATAGTAGTGGTTATTACTCCCTGACTGTTTTTGACCAC	ARDKAAAYSSGYYSLTVFDH	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	114	0	0	100
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	248	0	0	100


Alignments

                                       <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                        T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                     Query_2842   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  100.0% (248/248)  IGHV4-4*02   49   ..........................................................................................  138
                                        T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                       --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                        E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                     Query_2842   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  100.0% (248/248)  IGHV4-4*02   139  ..........................................................................................  228
                                        E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                       R3-IMGT----------------------------------------------------><-------------------------CDR3
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  K  A  A  A  Y  S  S 
                     Query_2842   181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGACAAAGCGGCCGCTTATAGTAGT  270
V  100.0% (248/248)  IGHV4-4*02   229  ....................................................................----------------------  296
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (18/18)    IGHD3-22*01  12   ----------------------------------------------------------------------------------........  19

                                       -IMGT------------------------>                                  
                                        G  Y  Y  S  L  T  V  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_2842   271  GGTTATTACTCCCTGACTGTTTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  100.0% (18/18)    IGHD3-22*01  20   ..........------------------------------------------------------  29
J  97.7% (42/43)     IGHJ4*02     6    ---------------------......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_315499

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           332     3e-93
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ5*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-10*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCA	TCGGGGAG	GAATAAGTCAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCAGAGATCATCGGGGAGGAATAAGTCATTGGTTCGACTCC	TRDHRGGISHWFDS	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	24	6	0	80
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	234	22	0	91.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  L  A  S  G  F  T  F  G  D  Y  P  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_2843   1    GGTCCCTGAGACTCTCCTGTTTAGCTTCTGGATTCACCTTTGGTGATTATCCTATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  91.4% (234/256)  IGHV3-49*04  47   ....................AC............................G.....A............................G....  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  E  S  E  I  Y  G  G  T  T  E  Y  A  A  S  A  K  G  R  F  S  I  S  R  D  
                    Query_2843   91   AATGGGTCGGTTTCATTGAAAGTGAAATTTATGGTGGGACAACAGAATACGCCGCGTCTGCGAAAGGCAGATTCAGCATCTCAAGAGATT  180
V  91.4% (234/256)  IGHV3-49*04  137  .G.....A.........AG...CA..GC................................T..............C.............G  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      Y  S  K  S  I  V  Y  L  Q  M  N  S  L  Q  T  E  D  T  A  V  Y  Y  C  T  R  D  H  R  G  G  
                    Query_2843   181  ATTCCAAAAGCATCGTCTACTTGCAAATGAACAGCCTGCAAACCGAGGACACAGCCGTATATTACTGTACCAGAGATCATCGGGGAGGAA  270
V  91.4% (234/256)  IGHV3-49*04  227  ...............C...TC.................A...................G...........T.....--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (8/8)     IGHD3-10*01  14   -------------------------------------------------------------------------------........---  21

                                      IMGT--------------->                                  
                                      I  S  H  W  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2843   271  TAAGTCATTGGTTCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.8% (45/46)    IGHJ5*01     6    --------....................A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_315498

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGATGGA	ATTACTAT	CACACGAAGCA	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCGATGGAATTACTATCACACGAAGCAATGGTTTTGATATA	TRGDGITITRSNGFDI	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	225	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_2844   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGGCTTGGGTCCGCCAGGCGCCAGGGAGGGGGCTGG  90
V  91.5% (225/246)  IGHV3-53*01  47   ................................................A.......AGC..............T.......A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  F  A  Y  T  V  K  G  R  F  T  I  P  R  D  N  S  K  
                    Query_2844   91   AGTGGGTCTCAGTTATTTACAGCGGTGGTACCACATACTTCGCATACACCGTGAAGGGCCGATTCACCATCCCCAGAGACAATTCCAAGA  180
V  91.5% (225/246)  IGHV3-53*01  137  ...................T..........G........A....G..T.......................T..................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      I  T  L  Y  L  Q  M  P  S  L  R  A  D  D  M  A  L  Y  Y  C  T  R  G  D  G  I  T  I  T  R  
                    Query_2844   181  TCACGCTGTATCTTCAAATGCCCAGCCTGAGAGCGGACGACATGGCCCTGTACTACTGTACGAGAGGCGATGGAATTACTATCACACGAA  270
V  91.5% (225/246)  IGHV3-53*01  227  A...................AA............C..G....C....G....T......G......------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  3    --------------------------------------------------------------------------........--------  10

                                      ---------------->                                  
                                      S  N  G  F  D  I  W  G  Q  G  S  L  V  P  V  P  S  
                    Query_2844   271  GCAATGGTTTTGATATATGGGGCCAAGGGTCTCTGGTCCCCGTCCCTTCAG  321
J  85.4% (41/48)    IGHJ3*02     3    ---...C.........C............A.AA.....A.....T......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_295511

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           37.2    9e-07
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCTT	CTATGATAGCAGTGGTTATTAC	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCTTCTATGATAGCAGTGGTTATTACCACTTTGACTAT	VVFYDSSGYYHFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	238	1	1	0	0	100
Total	N/A	N/A	238	226	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  A  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2845   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGCCGCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.0% (226/238)  IGHV4-59*01  49   .......................C.......G.T........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2845   91   TGGATTGGTTATATCTATCACAGTGGGACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.0% (226/238)  IGHV4-59*01  139  ........G.........T.........G...............C.............................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  F  Y  D  S  S  G  Y  Y  H 
                    Query_2845   181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGTGGTCTTCTATGATAGCAGTGGTTATTACCAC  270
V  95.0% (226/238)  IGHV4-59*01  229  ...................GC..........................G..T.......--------------------------------  286
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                                  
D  95.5% (21/22)    IGHD3-22*01  7    -----------------------------------------------------------------.........T............---  28
J  95.6% (43/45)    IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_2845   271  TTTGACTATTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  313
J  95.6% (43/45)    IGHJ4*02     6    ........C.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_295513

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           358     4e-101
IGHD3-10*01                                                                                           46.8    1e-09 
IGHJ4*02                                                                                              60.3    2e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAC	TATTACTATGGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTATTACTATGGTTCGGGGAGTTATTTTGAATAC	ARGHYYYGSGSYFEY	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  N  W  I  R  Q  H  P  G  K  G  
                    Query_2846   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  96.0% (239/249)  IGHV4-31*03  50   .....TCC...A..................G.............................G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  F  T  I  S  V  D  T  S  
                    Query_2846   94   TGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGATTTACCATATCAGTAGACACGTCTA  183
V  96.0% (239/249)  IGHV4-31*03  140  ..............T..................................................G........................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  Y  Y  Y  G  S  
                    Query_2846   184  AGAACCAGTTCTCCCTGAAGGTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTATTACTATGGTTCGG  273
V  96.0% (239/249)  IGHV4-31*03  230  ....................C....C...........................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (24/24)   IGHD3-10*01  2    --------------------------------------------------------------------------................  17

                                      ---------------->                                  
                                      G  S  Y  F  E  Y  G  G  Q  G  T  L  V  T  A  S  S  
                    Query_2846   274  GGAGTTATTTTGAATACGGGGGCCAGGGAACCCTGGTCACCGCCTCATCAG  324
D  100.0% (24/24)   IGHD3-10*01  18   ........-------------------------------------------  25
J  90.7% (39/43)    IGHJ4*02     6    --------.....C...T........................T...C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_295515

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     2e-90
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCTCAG	AGTAGTACCAACTGTTATG	GGCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCAGAGTAGTACCAACTGTTATGGGCTTCTACTACTACGGTATGGACGTC	ARGLRVVPTVMGFYYYGMDV	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	240	117	109	5	3	93.2
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	229	16	3	92.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  G  G  S  F  S  T  Y  Y  W  T  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_2847   1    ACCCTGTCCCTCACCTGCACTGTCTATGGTGGGTCCTTCAGCACTTACTACTGGACCTGGATCCGCCAGACCCCAGGGAAGGGGCTGGAG  90
V  92.3% (229/248)  IGHV4-34*01  49   ..................G......................TGG...........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><-----------------------------------------------------FR3
                                       W  I  G  E  I  Y  V  G  G  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_2847   91   TGGATTGGGGAAATCTATGTTGGTGGAGGCACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAG  180
V  92.3% (229/248)  IGHV4-34*01  139  ...............A..CA.A.....A.....---...................................A..................  225
                                       W  I  G  E  I  N  H  S  G  S  T     N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                      -IMGT------------------------------------------------------><-------------------------CDR3
                                       N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  G  L  R  V  V  P  T  V 
                    Query_2847   181  AACCAGTTCTCCCTGAACCTGAGCTCTGTGACCGCCGCGGACACGGCTATGTACTACTGCGCGAGAGGCCTCAGAGTAGTACCAACTGTT  270
V  92.3% (229/248)  IGHV4-34*01  226  .................G..............................G....T.....T........----------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                      
D  89.5% (17/19)    IGHD2-2*01   11   --------------------------------------------------------------------------..........G...C.  26

                                      -IMGT------------------------>                                 
                                       M  G  F  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2847   271  ATGGGCTTCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
D  89.5% (17/19)    IGHD2-2*01   27   ...------------------------------------------------------------  29
J  100.0% (55/55)   IGHJ6*02     8    --------.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_313268

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           321     6e-90
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CAATAAGG	CTATGAATCGGGG	TGCTCCCTCTGGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AATAAGGCTATGAATCGGGGTGCTCCCTCTGGGTAC	NKAMNRGAPSGY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	241	113	107	6	0	94.7
Total	N/A	N/A	241	223	18	0	92.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  I  F  S  T  S  A  M  H  W  I  R  Q  A  P  G  K  G  L  
                    Query_2848   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCATCTTCAGCACCTCTGCCATGCACTGGATCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.5% (223/241)  IGHV3-30*03  47   ........................C...........C......T.G..A..G..........G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  L  D  G  S  D  K  Y  Y  A  D  S  V  K  G  R  F  T  L  S  R  D  N  S  
                    Query_2848   91   AGTGGGTGGCAGTTATATCGTTGGATGGAAGTGATAAGTACTATGCAGACTCCGTGAAGGGCCGCTTCACCCTCTCCAGAGACAACTCCA  180
V  92.5% (223/241)  IGHV3-30*03  137  ...................A.AT.........A....A..........................A......A.............T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  N  K  A  M  N  R  G  A  P  
                    Query_2848   181  AGAACACCCTGTATCTGCAAATGAACAGCCTGAGACCTGAGGACACGGCTGTCTATTACTGCAATAAGGCTATGAATCGGGGTGCTCCCT  270
V  92.5% (223/241)  IGHV3-30*03  227  .......G...........................G................G........-----------------------------  287
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                
D  84.6% (11/13)    IGHD3-10*01  7    ---------------------------------------------------------------------.....GT......--------  19

                                      ------->                                  
                                      S  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2848   271  CTGGGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (37/37)   IGHJ4*02     12   -----.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_313269

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           344     6e-97
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGTTGGGCAA	CAGTGGCTGGTAC	GGAGT	CTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGTTGGGCAACAGTGGCTGGTACGGAGTCTTTAACTTC	ARDGLGNSGWYGVFNF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_2849   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTTTAATATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-30*04  47   ................................................A.GC...................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  Y  D  G  S  N  G  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2849   91   AGTGGTTGGCAGTTATATCATATGATGGAAGTAATGGACACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-30*04  137  .....G.............................AA.T...................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  G  T  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  R  D  G  L  G  N  S  G  
                    Query_2849   181  AGGGCACCCTGTATCTGGAAATGAACAGTCTGAGAGTTGAGGACACGGCTGTGTATTTCTGTGCGAGAGATGGGTTGGGCAACAGTGGCT  270
V  94.0% (235/250)  IGHV3-30*04  227  ..AA...G.........C..........C.......C....................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD6-19*01  9    ----------------------------------------------------------------------------------........  16

                                      T------------------>                                  
                                      W  Y  G  V  F  N  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2849   271  GGTACGGAGTCTTTAACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (13/13)   IGHD6-19*01  17   .....-------------------------------------------------  21
J  95.5% (42/44)    IGHJ4*02     5    ----------....G...A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_313266

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           266     2e-73
IGHD3-10*01                                                                                           12.2    33   
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTTGGAGGGGGCTTCGGGACAA	TATTACAAC	GGACGACGGGGAAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGGAGGGGGCTTCGGGACAATATTACAACGGACGACGGGGAATTATGGACGTC	ARLEGASGQYYNGRRGIMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	19	11	0	63.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	209	39	0	84.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  V  N  S  F  F  W  V  W  L  R  Q  P  P  G  K  G 
                    Query_2850   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCAGAGTGAATTCTTTCTTTTGGGTCTGGCTCCGCCAGCCCCCCGGGAAGGGA  90
V  84.3% (209/248)  IGHV4-39*01  49   .............................T...........CAGT.G.AG..A..AC....G....A.............A........G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  R  Y  P  G  S  T  H  Y  K  P  S  L  R  S  R  L  T  M  S  L  D  T  S 
                    Query_2850   91   CTCGAGTGGATTGGGACTATACGTTATCCTGGGAGCACCCACTACAAGCCGTCCCTCAGGAGTCGACTTACCATGTCCCTTGACACGTCC  180
V  84.3% (209/248)  IGHV4-39*01  139  ..G.............G...CTA....AG..........T.......C..........A.......G.C.....A...G.A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       R  N  Q  F  S  L  N  L  G  S  V  T  A  A  D  T  S  M  Y  F  C  A  R  L  E  G  A  S  G  Q 
                    Query_2850   181  AGGAACCAGTTCTCCCTCAACCTGGGGTCTGTGACCGCCGCAGACACGTCTATGTACTTCTGTGCGAGGTTGGAGGGGGCTTCGGGACAA  270
V  84.3% (209/248)  IGHV4-39*01  229  .A...............G..G...A.C.....................G..G....T.A.........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      DR3-IMGT------------------------>                                 
                                       Y  Y  N  G  R  R  G  I  M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_2850   271  TATTACAACGGACGACGGGGAATTATGGACGTCTGGGGCCAAGGGGCCACGGTCACCGTCTCCTCA  336
D  88.9% (8/9)      IGHD3-10*01  23   .....T...---------------------------------------------------------  31
J  97.7% (42/43)    IGHJ6*02     20   -----------------------......................A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_313264

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            355     3e-100
IGHD6-19*01                                                                                           12.2    32    
IGHJ6*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTCTAATAAG	GGCTGG	GGCCCCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCTCTAATAAGGGCTGGGGCCCCGACTACTACGGCTTGGACGTC	ASSNKGWGPDYYGLDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  P  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2851   1    GGTCCTTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAGTCCCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (237/247)  IGHV3-7*03   47   .....C..............................C.......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2851   91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (237/247)  IGHV3-7*03   137  ....................C.....................................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  S  N  K  G  W  G  P  
                    Query_2851   181  AGAATTCACTGTATTTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTATTGTGCGAGCTCTAATAAGGGCTGGGGCCCCG  270
V  96.0% (237/247)  IGHV3-7*03   227  ....C.........C....A................................G.....C........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------......-------  18

                                      T------------------>                              
                                      D  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_2851   271  ACTACTACGGCTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  320
J  96.0% (48/50)    IGHJ6*02     10   ..........TA......................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_313265

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           336     1e-94
IGHD1-7*01                                                                                            12.2    32   
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGCGAGGA	TGGAAGTAC	GACGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGCGAGGATGGAAGTACGACGGCTACTTCTACGGTATGGACGTC	ARDPRGWKYDGYFYGMDV	232	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	117	21	14	1	6	66.7
FR3-IMGT	118	231	114	109	5	0	95.6
CDR3-IMGT (germline)	232	239	8	8	0	0	100
Total	N/A	N/A	245	232	7	6	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2852   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCAATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (232/245)  IGHV4-59*01  49   ...................................C......................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S        W  S  T  N  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_2852   91   TGGATTGGGTATATCTCTT------GGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCAGCATTTCAGTAGACACGTCCAAGAAT  174
V  94.7% (232/245)  IGHV4-59*01  139  ................A..ACAGTG.......................................C...A....................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  R  G  W  K  Y  D  G 
                    Query_2852   175  CAGTTCTCCCTGAAGCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCCGCGAGGATGGAAGTACGACGGC  264
V  94.7% (232/245)  IGHV4-59*01  229  .................G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (8/9)      IGHD1-7*01   9    ---------------------------------------------------------------------------.....C...------  17
J  98.2% (54/55)    IGHJ6*02     8    -----------------------------------------------------------------------------------------.  8

                                      -------------------->                                 
                                       Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2852   265  TACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  98.2% (54/55)    IGHJ6*02     9    ....A.................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_313262

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2853   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_2853   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  K  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_2853   181  AAGAACAAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGCGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  97.6% (244/250)  IGHV4-31*03  229  ......C.......................................................T.......--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2853   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_313260

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            296     2e-82
IGHD6-19*01                                                                                           25.7    0.003
IGHJ5*01                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ5*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAGGGGG	AGCAGTGGCTGGT	TCACGGGCCCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGGGGGAGCAGTGGCTGGTTCACGGGCCCCTTCGACTCC	ARVRGSSGWFTGPFDS	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	56	27	22	5	0	81.5
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	219	30	0	88


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  A  G  S  I  T  S  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_2854   1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTGCTGGCTCCATCACTAGTAATAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  88.0% (219/249)  IGHV4-4*02   47   ..A.....TCC...A...............G...........GC....G...C.....................................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  R  G  S  A  N  Y  Q  P  S  L  W  S  R  V  T  I  S  L  D  R  S  
                    Query_2854   91   TGGAGTGGATTGGAGAAATCTATCATAGGGGGAGCGCCAACTATCAGCCGTCCCTCTGGAGCCGAGTCACCATATCACTAGACAGGTCCT  180
V  88.0% (219/249)  IGHV4-4*02   137  .............G..............T......A.......CA.C.........AA...T...............G......A....A  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      *  N  Q  F  S  M  D  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  V  R  G  S  S  G  W  
                    Query_2854   181  AGAACCAGTTCTCCATGGACTTGAACTCGGTGACCGCCGCGGACTCGGCCGTATATTACTGTGCGAGAGTAAGGGGGAGCAGTGGCTGGT  270
V  88.0% (219/249)  IGHV4-4*02   227  ..............C..A.GC...G...T...............A.......G................---------------------  295
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD6-19*01  7    -----------------------------------------------------------------------------.............  19

                                      T------------------>                                  
                                      F  T  G  P  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_2854   271  TCACGGGCCCCTTCGACTCCTGGGGCCAGGGAATCCTGGTCACCGTCTCGTCAG  324
J  93.0% (40/43)    IGHJ5*01     9    -----------.................A....C...............C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_313261

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           388     4e-110
IGHD6-13*01                                                                                           18.0    0.56  
IGHJ5*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGTGG	GCAGCAGCT	ACA	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGTGGGCAGCAGCTACACGACCAC	AKDRGQQLHDH	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	249	1	0	99.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2855   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.6% (249/250)  IGHV3-23*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2855   91   AGTGGGTCTCAGGTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  99.6% (249/250)  IGHV3-23*01  137  ............C.............................................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  R  G  Q  Q  L  H  
                    Query_2855   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCGTGGGCAGCAGCTACACG  270
V  99.6% (249/250)  IGHV3-23*01  227  ......................................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD6-13*01  8    ----------------------------------------------------------------------------.........-----  16
J  97.6% (40/41)    IGHJ5*02     11   ----------------------------------------------------------------------------------------..  12

                                      ---->                                  
                                      D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2855   271  ACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.6% (40/41)    IGHJ5*02     13   ...C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_70049

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           382     3e-108
IGHD3-16*02                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	GATTACGTTTGGGGGAATTATCGT	CACCTTCCCGGC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGATTACGTTTGGGGGAATTATCGTCACCTTCCCGGCGACTTC	AREDYVWGNYRHLPGDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2856   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-33*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  V  S  N  K  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2856   91   AGTGGGTGGCAGTTATATGGTATGATGTAAGTAATAAATACTATACAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  98.8% (247/250)  IGHV3-33*01  137  ...........................G................G.............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  D  Y  V  W  G  N  
                    Query_2856   181  AGAACACGCTGTACCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGGATTACGTTTGGGGGAATT  270
V  98.8% (247/250)  IGHV3-33*01  227  .............T........................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.8% (23/24)    IGHD3-16*02  8    -----------------------------------------------------------------------................G..  26

                                      GT-------------------->                                  
                                      Y  R  H  L  P  G  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2856   271  ATCGTCACCTTCCCGGCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.8% (23/24)    IGHD3-16*02  27   .....----------------------------------------------------  31
J  97.5% (39/40)    IGHJ4*02     9    -----------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_70048

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           297     7e-83
IGHD3-9*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGACCCA	TACGGTATTTTG	GCTATTGAGAAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGTGACCCATACGGTATTTTGGCTATTGAGAAG	ATGDPYGILAIEK	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	42	9	0	82.4
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  N  Y  W  S  W  I  R  Q  S  P  A  K  G 
                    Query_2857   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGCCAACTACTGGAGTTGGATCCGCCAATCCCCTGCAAAGGGC  90
V  88.0% (220/250)  IGHV4-31*03  49   .................................................GTT..........C...........GCA...A.GG......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  T  T  E  Y  N  P  S  L  K  S  R  L  T  M  S  I  D  P  S 
                    Query_2857   91   CTCGAGTGGATTGGATACATCTATTATGGTGGGACCACCGAGTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCCATTGACCCGTCT  180
V  88.0% (220/250)  IGHV4-31*03  139  ..G...........G...........CA......G....T.C...........C............G.T.....A..AG.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       T  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  D  P  Y  G  I  L 
                    Query_2857   181  ACGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGTGACCCATACGGTATTTTG  270
V  88.0% (220/250)  IGHV4-31*03  229  .A...................C...G...........................G.............G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD3-9*01   5    ------------------------------------------------------------------------------....A.......  16

                                      ----------->                                
                                       A  I  E  K  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2857   271  GCTATTGAGAAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
J  100.0% (32/32)   IGHJ4*02     15   ------------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_158605

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         300     9e-84
IGHD3-9*01                                                                                            14.1    8.7  
IGHJ2*01                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGACCGATAC	TGACTGG	GGTGGTCACACAGGGCTCTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACCGATACTGACTGGGGTGGTCACACAGGGCTCTTCTGGTACTTCGATCTC	AKTDTDWGGHTGLFWYFDL	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	218	26	0	89.3


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  V  V  S  G  Y  S  I  N  N  G  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  L 
                    Query_2858     1    ACCCTGTCCCTCACCTGCGTTGTGTCTGGTTACTCCATCAACAATGGTTACTACTGGGGCTGGCTCCGGCAGCCCCCAGGAAAGGGGCTG  90
V  89.3% (218/244)  IGHV4-38-2*01  49   ...................C...C................G..G...................A................G.........  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  V  Y  H  R  G  D  A  Y  Y  N  P  S  L  K  S  R  V  T  V  S  M  D  T  S  S 
                    Query_2858     91   GAGTGGATTGGGAGTGTCTATCATCGCGGGGACGCGTACTACAATCCGTCCCTCAAGAGTCGAGTCACCGTCTCAATGGACACGTCCAGT  180
V  89.3% (218/244)  IGHV4-38-2*01  139  ...............A........A.T...AG.A.C........C........................A.A...G.A..........AG  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                         N  Q  V  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  T  D  T  D  W  G  G  H 
                    Query_2858     181  AATCAGGTCTCCCTGAGCCTGAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAAGACCGATACTGACTGGGGTGGTCAC  270
V  89.3% (218/244)  IGHV4-38-2*01  229  ..C...T.........AG.....C...............................A........--------------------------  292
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-9*01     15   --------------------------------------------------------------------------.......---------  21

                                        MGT----------------------->                                  
                                         T  G  L  F  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2858     271  ACAGGGCTCTTCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  331
J  100.0% (50/50)   IGHJ2*01       4    -----------..................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_294641

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           282     4e-78
IGHD4-17*01                                                                                           12.2    32   
IGHJ2*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACAGTTTTTATCCCCCGTCG	GACTAC	TT	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAACAGTTTTTATCCCCCGTCGGACTACTTCTTCGATCTC	ARDNSFYPPSDYFFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	93	21	0	81.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  K  N  Y  N  M  N  W  V  R  Q  V  P  G  K  G  L  
                    Query_2859   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAAGAACTACAACATGAACTGGGTCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  86.0% (215/250)  IGHV3-21*01  47   ....................G.....................GT.G...T.G....................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  S  R  N  N  D  I  Q  Y  A  D  S  M  R  G  R  V  I  I  S  R  D  N  V  
                    Query_2859   91   AGTGGGTCTCATCGATTAGGAGTAGGAACAATGACATACAATACGCAGACTCAATGAGGGGCCGAGTCATCATCTCCAGGGACAATGTCA  180
V  86.0% (215/250)  IGHV3-21*01  137  .............C.....T.....T.GT.G.T.....T.C............G...A.......T...C.........A.....C.C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  S  S  L  Y  L  H  M  S  S  L  R  T  E  D  T  A  I  Y  F  C  A  R  D  N  S  F  Y  P  P  
                    Query_2859   181  ACAGTTCTCTGTATCTCCACATGAGCAGCCTGCGAACCGAGGACACGGCTATCTATTTCTGTGCGAGAGATAACAGTTTTTATCCCCCGT  270
V  86.0% (215/250)  IGHV3-21*01  227  .G.AC..A........G..A....A.......A..G..............G.G....A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      T------------------>                                  
                                      S  D  Y  F  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2859   271  CGGACTACTTCTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCTTCAG  324
D  100.0% (6/6)     IGHD4-17*01  2    --......----------------------------------------------  7
J  97.7% (43/44)    IGHJ2*01     10   ----------.......................................C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_265109

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           321     7e-90
IGHD6-19*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCATCA	TATAGCAGTGGGTGG	GT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATCATATAGCAGTGGGTGGGTACTACTTTGACTAC	ARHHIAVGGYYFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  P  C  A  A  S  G  F  T  F  N  S  Y  S  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2860   1    GGTCCCTGAGACTCCCCTGTGCAGCCTCTGGATTCACCTTCAATTCCTATAGTATAAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.5% (226/247)  IGHV3-21*01  47   ..............T...........................G.AG......C..G.AC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  S  G  S  G  L  Y  I  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2860   91   AGTGGGTCTCATTTATCAGTGGTAGTGGTCTATATATACATTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.5% (226/247)  IGHV3-21*01  137  ............CC..T...A.....A..AGT..C...T.C.................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  S  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  H  H  I  A  V  G  G  
                    Query_2860   181  AGAACTCACTGTCTCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGCATCATATAGCAGTGGGTGGGT  270
V  91.5% (226/247)  IGHV3-21*01  227  ............A..........A...........................................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.3% (14/15)    IGHD6-19*01  4    -------------------------------------------------------------------------...........C...--  18

                                      ------------->                                  
                                      Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2860   271  ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (48/48)   IGHJ4*02     1    ................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_265108

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	GGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARQGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_2861   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  94.8% (276/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_2861   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  N  A  W  D  T  A
                    Query_2861   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAATGCCTGGGACACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  .......C.....................................C...........G......A..........G....C.........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  Q  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_2861   271  TATATATTACTGTGCGAGACAGGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  94.8% (276/291)  IGHV5-51*01  276  C..G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_2861   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_294644

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70D*04                                                                                          366     2e-103
IGHJ6*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70D*04	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGAT	N/A	N/A	N/A	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACACGGATGGACGTC	TRMDV	263	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	44	2	0	95.7
CDR1-IMGT	47	76	30	24	6	0	80
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	106	8	0	93
CDR3-IMGT (germline)	263	270	8	7	1	0	87.5
Total	N/A	N/A	270	252	18	0	93.3


Alignments

                                       <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                         L  V  K  P  T  Q  T  L  A  L  T  C  S  F  S  G  F  S  L  S  T  G  G  M  R  V  S  W  I  R
                    Query_2862    1    GCTGGTGAAACCCACACAGACCCTCGCACTGACCTGCTCCTTCTCTGGGTTCTCACTTTCCACTGGGGGTATGCGTGTGAGTTGGATCCG  90
V  93.3% (252/270)  IGHV2-70D*04  30   .........................A...........A...................CAG....A.T..A...........C........  119
                                         L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  R  V  S  W  I  R

                                       -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                         Q  P  P  G  K  A  L  E  W  L  A  R  I  D  W  D  D  D  K  F  Y  S  T  S  L  K  T  R  L  T
                    Query_2862    91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACGCATTGATTGGGATGATGATAAATTCTACAGTACATCTCTGAAGACCAGACTCAC  180
V  93.3% (252/270)  IGHV2-70D*04  120  ..................................................................C.................G.....  209
                                         Q  P  P  G  K  A  L  E  W  L  A  R  I  D  W  D  D  D  K  F  Y  S  T  S  L  K  T  R  L  T

                                       ---------------------FR3-IMGT----------------------------------------------------><--CDR3-
                                         I  S  K  D  S  S  K  N  Q  V  V  L  R  L  T  N  M  D  P  A  D  T  A  T  Y  Y  C  T  R  M
                    Query_2862    181  CATCTCCAAGGACTCCTCCAAAAACCAGGTGGTCCTTAGATTGACCAACATGGACCCTGCAGACACAGCCACATATTACTGTACACGGAT  270
V  93.3% (252/270)  IGHV2-70D*04  210  .............A........................C.A..................TG...........G.........G.......  299
                                         I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                       IMGT-->                              
                                         D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_2862    271  GGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  307
J  100.0% (37/37)   IGHJ6*02      23   .....................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_294645

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD6-25*01                                                                                           14.1    9.4   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTC	ARQSSAGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  S  S  G  Y  D  F  L  D  Y
                    Query_2863   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGAGTTCTGGATACGACTTTCTCGACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ..............................A.....C...........................G...........AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_2863   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G.......................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2863   181  GTCATTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGAACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  ...C.........................................C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  M  V  T  V  S  S
                    Query_2863   271  CAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTC  360
V  95.2% (277/291)  IGHV5-51*01  276  ..T..................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------...............................C...............  61

                                       
                                       
                    Query_2863   361  A  361
J  97.9% (47/48)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_265105

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD1-26*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	GGG	GGTCTAGTGGAAGGTACTAC	CTCCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTAC	ARGGLVEGTTSFFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  T  K  S  G  E  S  L  R  I  S  C  K  A  S  G  Y  I  F  S  T  Y
                    Query_2864   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGACAAAGTCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCTTCTGGATACATCTTTTCCACCTA  90
V  93.1% (269/289)  IGHV5-51*01  6    .............................A....C...............A..............G...........G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  V  V  Y  P  G  D  S  K  T  R  Y  S  P
                    Query_2864   91   TTGGATCGCCTGGGTGCGCCAGGCGCCCGGGAAAGGCCTAGAGTGGATGGGAGTCGTCTATCCTGGTGACTCTAAGACCAGATACAGCCC  180
V  93.1% (269/289)  IGHV5-51*01  96   C.......G.............AT...............G...........GA..A.................G.T..............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  A  D  T  A
                    Query_2864   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCGCGGACACCGC  270
V  93.1% (269/289)  IGHV5-51*01  186  ...............................................................................T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  A  R  G  G  L  V  E  G  T  T  S  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2864   271  CATTTATTACTGTGCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCGTC  360
V  93.1% (269/289)  IGHV5-51*01  276  ...G............A..-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  85.0% (17/20)    IGHD1-26*01  1    ----------------------...A......G..C......------------------------------------------------  20
J  97.7% (43/44)    IGHJ4*02     5    ------------------------------------------------.......................................C..  46

                                        
                                        
                    Query_2864   361  AG  362
J  97.7% (43/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_265104

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           374     7e-106
IGHD3-3*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	242	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2865   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (242/245)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_2865   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.8% (242/245)  IGHV4-34*01  139  .........................................................................T................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_2865   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  98.8% (242/245)  IGHV4-34*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2865   271  GCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_265107

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           363     2e-102
IGHD1-26*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GA	GGTGTAGTGGGAGC	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTAT	ARGGVVGAPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	261	29	0	90


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  Q  P  G  S  S  V  K  V  S  C  K  S  S  G  G  S  F  S  S  Y
                    Query_2866   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGCAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGAGTTCTGGAGGTAGTTTCAGCAGCTA  90
V  90.0% (261/290)  IGHV1-69*01  6    ..................G............A................................GC.........C.CC...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  M  P  L  F  G  I  P  T  Y  A  G
                    Query_2866   91   TGCTGTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGTATCATGCCTCTGTTTGGCATACCAACGTACGCAGG  180
V  90.0% (261/290)  IGHV1-69*01  96   ....A...............................................G.G.....C...A.C.....T.C.G...AC......CA  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  L  Q  G  R  V  T  I  T  A  D  A  S  T  R  T  A  Y  M  E  L  S  S  L  R  S  G  D  T  A
                    Query_2866   181  GAAGTTGCAGGGCAGAGTCACAATAACCGCGGACGCATCCACGAGGACAGCCTACATGGAGTTGAGCAGCCTGAGATCTGGGGACACGGC  270
V  90.0% (261/290)  IGHV1-69*01  186  ......C..............G..T..........A.........C...............C..................A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  V  V  G  A  P  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_2866   271  CATTTATTACTGTGCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTATTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  353
V  90.0% (261/290)  IGHV1-69*01  276  .G.G................---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  92.9% (13/14)    IGHD1-26*01  1    ----------------------...A..........-----------------------------------------------  14
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------------.........C............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_80481

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           327     9e-92
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAAG	AGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQEWLPGDWYFDL	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  R  N  Y  W  S  W  I  R  Q  P  P  G  E  R  L  E 
                    Query_2867   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCACTAGAAACTACTGGAGCTGGATTCGGCAGCCCCCAGGGGAGAGACTGGAG  90
V  93.0% (226/243)  IGHV4-59*08  49   ...................C...........G........G...TT................C...............A..G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_2867   91   TGGATAGCGTATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  93.0% (226/243)  IGHV4-59*08  139  .....T.G.......T...........AG...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  F  L  P  A  V  Q  E  W  L 
                    Query_2867   181  CAGTTCTCCCTGAAGATGACCTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTG  270
V  93.0% (226/243)  IGHV4-59*08  229  ...............C...G.........................G.................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  10   ----------------------------------------------------------------------------------........  17

                                      ----------------------->                                  
                                       P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_2867   271  CCAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCGTCAG  328
J  96.1% (49/51)    IGHJ2*01     3    -------......................................A.......C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_70045

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           336     1e-94
IGHD3-22*01                                                                                           31.5    6e-05
IGHJ5*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTGGCCCTTCTTTTGGGGGAG	ACTATGATAGCAGTGGTTA	CCAGCAAGGGAC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCTGGCCCTTCTTTTGGGGGAGACTATGATAGCAGTGGTTACCAGCAAGGGACCTGGTTGGACCCC	ARAGPSFGGDYDSSGYQQGTWLDP	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  V  W  I  R  Q  A  P  G  K  G  L  
                    Query_2868   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGGTATGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-11*06  47   ........................................................AGC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  F  S  T  Y  T  S  Y  A  G  S  V  E  G  R  F  T  V  S  R  D  N  G  
                    Query_2868   91   AGTGGGTTTCATACATTAGTACTTTCAGTACTTACACAAGCTACGCAGGCTCTGTGGAGGGCCGTTTCACCGTCTCCAGAGACAACGGCA  180
V  93.2% (232/249)  IGHV3-11*06  137  .....................G.AGT....G........A........A.......A.......A......A...............C..  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  G  P  S  F  G  G  
                    Query_2868   181  GGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGCGAGCTGGCCCTTCTTTTGGGGGAG  270
V  93.2% (232/249)  IGHV3-11*06  227  A...................................................G............A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ----CDR3-IMGT------------------------------>                                  
                                      D  Y  D  S  S  G  Y  Q  Q  G  T  W  L  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_2868   271  ACTATGATAGCAGTGGTTACCAGCAAGGGACCTGGTTGGACCCCTGGGGCCAGGGGGCCCTGGTCACCGTCTCCTCAG  348
D  94.7% (18/19)    IGHD3-22*01  6    ..........T........-----------------------------------------------------------  24
J  93.6% (44/47)    IGHJ5*02     5    -------------------------------......C.................AA.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_70044

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           279     3e-77
IGHD3-16*01                                                                                           18.0    0.60 
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACAACG	TATGCTTAT	GTCAGTGCTTGGGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAACGTATGCTTATGTCAGTGCTTGGGGATGATGCTTTTGATGTC	ARRQRMLMSVLGDDAFDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	96	18	0	84.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	214	36	0	85.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  V  T  T  T  R  Y  S  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_2869   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCGTCACCACTACTAGATACTCCTGGGGTTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  85.6% (214/250)  IGHV4-39*01  49   ...............................G....A...G..G..G...T....A......C..........................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Q  M  F  Y  G  G  S  T  Y  Q  N  P  S  L  N  S  R  V  T  E  S  V  D  P  S 
                    Query_2869   91   CTGGAATGGATTGGGCAGATGTTCTATGGTGGGAGCACGTACCAGAACCCGTCGCTGAATAGTCGAGTCACCGAGTCCGTTGACCCGTCC  180
V  85.6% (214/250)  IGHV4-39*01  139  .....G.........AGT..C.AT...A..........C...T.C........C..C..G............ATA.....A...A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  S  Q  F  F  L  N  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  R  Q  R  M  L  M  S 
                    Query_2869   181  AAGAGTCAGTTCTTCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCTGTATATTATTGTGCGAGACGACAACGTATGCTTATGTCA  270
V  85.6% (214/250)  IGHV4-39*01  229  ....AC.......C......G....G...................A.......G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  26   -----------------------------------------------------------------------------.........----  34

                                      -IMGT--------------------->                                  
                                       V  L  G  D  D  A  F  D  V  W  G  Q  G  T  G  V  T  V  S  S  
                    Query_2869   271  GTGCTTGGGGATGATGCTTTTGATGTCTGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  331
J  96.0% (48/50)    IGHJ3*01     1    -----------...............................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_70047

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           380     1e-107
IGHD5-12*01                                                                                           14.1    8.2   
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGA	TGGCTAC	AATCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGGCTACAATCCTTACTTTGACTAC	ARDDGYNPYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	247	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2870   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGCTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (247/251)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  L  I  D  T  S 
                    Query_2870   91   CTGGAGTGGATTGGCTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATTAATAGACACGTCT  180
V  98.4% (247/251)  IGHV4-31*03  139  ..............G.............................................................C.G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  D  G  Y  N  P  Y 
                    Query_2870   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGATGGCTACAATCCTTAC  270
V  98.4% (247/251)  IGHV4-31*03  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD5-12*01  11   --------------------------------------------------------------------------.......---------  17
J  100.0% (46/46)   IGHJ4*02     3    ---------------------------------------------------------------------------------------...  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2870   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (46/46)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_158608

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_2871   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.0% (223/245)  IGHV4-59*01  49   ...............................G........G.AGT.A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  P  V  D  T  S  K  S 
                    Query_2871   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTCCAGTAGACACGTCCAAGAGC  180
V  91.0% (223/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T.A....AT..................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_2871   181  CAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTT  270
V  91.0% (223/245)  IGHV4-59*01  229  ..............G.....C..................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2871   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_20724

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           344     6e-97
IGHD1-26*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTACAAAC	TGGGAGCCACT	CGAGGTCCGTG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATTACAAACTGGGAGCCACTCGAGGTCCGTGTGACTCC	AKDYKLGATRGPCDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2872   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATTCCATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-21*01  47   ..................................................AG....A.............G...................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  G  T  S  Y  I  Y  Y  A  D  S  M  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2872   91   AGTGGGTCTCATCTATTAGTAGTGGTACTAGTTACATATACTACGCAGACTCAATGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-21*01  137  .............C.........A...G.........................G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  V  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  Y  K  L  G  A  T  
                    Query_2872   181  AGAATTCAGTATCTTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAAAGATTACAAACTGGGAGCCACTC  270
V  94.0% (235/250)  IGHV3-21*01  227  ....C...C.G.A.C.....................................G.............G...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD1-26*01  8    ------------------------------------------------------------------------------.......T...-  18

                                      ---------------->                                  
                                      R  G  P  C  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2872   271  GAGGTCCGTGTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.6% (40/41)    IGHJ4*02     8    ----------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_149168

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           361     4e-102
IGHD3-16*01                                                                                           12.2    30    
IGHJ3*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTTTCC	TGGGGG	N/A	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTCCTGGGGGTGCTTATGATATC	ARHFPGGAYDI	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	238	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  F  C  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2873   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTTCTGCAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (238/245)  IGHV4-59*08  49   ...............................G.................A...G....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2873   91   TGGATTGGGTATATCTCTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  97.1% (238/245)  IGHV4-59*08  139  ................A.........................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  H  F  P  G  G  A  Y  D  I 
                    Query_2873   181  CAGTTCTCCCTGAAGCTGACCTCTGTGTCCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATTTTCCTGGGGGTGCTTATGATATC  270
V  97.1% (238/245)  IGHV4-59*08  229  ...................G.......A.....................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*01  17   -----------------------------------------------------------------------......-------------  22
J  91.5% (43/47)    IGHJ3*02     4    -----------------------------------------------------------------------------.....T.......  16

                                                                        
                                       W  G  H  G  T  M  V  T  V  S  P  
                    Query_2873   271  TGGGGCCACGGGACAATGGTTACCGTCTCTCCAG  304
J  91.5% (43/47)    IGHJ3*02     17   ........A...........C.........T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_149169

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           338     5e-95
IGHD2-8*02                                                                                            14.1    8.5  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGGGAATTGAGGGAACTGCGACC	TACTGGT	T	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAATTGAGGGAACTGCGACCTACTGGTTCTACTTTGACCAC	ARGIEGTATYWFYFDH	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2874   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGGTTCACCTTCAGTAGCTTTGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.9% (231/246)  IGHV3-33*03  47   ...............................A................A..G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  N  K  K  Y  Y  A  D  S  V  K  G  R  F  T  F  S  R  D  N  S  
                    Query_2874   91   AGTGGGTGGCAGTTATATGGTATGATGGAAATAAAAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCTTCTCCAGAGACAACTCCA  180
V  93.9% (231/246)  IGHV3-33*03  137  ..............................G...T....................................A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  I  L  H  L  Q  M  N  S  L  A  A  E  D  T  A  V  Y  Y  C  A  R  G  I  E  G  T  A  T  
                    Query_2874   181  AGAACATCCTACATCTGCAAATGAACAGTTTGGCAGCCGAGGACACGGCTGTCTATTACTGTGCGAGGGGAATTGAGGGAACTGCGACCT  270
V  93.9% (231/246)  IGHV3-33*03  227  ......CG..GT................CC..AG..................G.............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-8*02   10   -----------------------------------------------------------------------------------------.  10

                                      T------------------>                                
                                      Y  W  F  Y  F  D  H  W  G  Q  G  T  V  V  T  V  S  S
                    Query_2874   271  ACTGGTTCTACTTTGACCACTGGGGCCAGGGAACCGTGGTCACCGTCTCCTC  322
D  100.0% (7/7)     IGHD2-8*02   11   ......----------------------------------------------  16
J  95.6% (43/45)    IGHJ4*02     2    -------..........T.................C................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_310512

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GTTCTCC	ATTGTAGTAGTTCCAG	TCCCGGATGAAA	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGTTCTCCATTGTAGTAGTTCCAGTCCCGGATGAAAACTCCTACGGAATGGACGTC	AKEFSIVVVPVPDENSYGMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2875   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTTACCACCCATGCCATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-23*01  47   .........................C................G..G.T...............................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  V  T  G  T  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_2875   91   AGTGGGTCGCAAGCGTTACTGGTACTGGAGGCAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACCCCA  180
V  90.8% (227/250)  IGHV3-23*01  137  ........T..GCTA...G.....G...T..T.....................................................TT...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  I  L  F  L  Q  M  N  S  P  R  A  E  D  T  A  V  Y  Y  C  A  K  E  F  S  I  V  V  V  
                    Query_2875   181  AGAACATCCTGTTTCTACAGATGAACAGCCCGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAAGAGTTCTCCATTGTAGTAGTTC  270
V  90.8% (227/250)  IGHV3-23*01  227  ......CG....A...G..A..........T.....................A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD2-2*01   6    -----------------------------------------------------------------------------...........A.  18

                                      DR3-IMGT-------------------------->                                 
                                      P  V  P  D  E  N  S  Y  G  M  D  V  W  G  Q  G  T  P  V  T  V  A  S 
                    Query_2875   271  CAGTCCCGGATGAAAACTCCTACGGAATGGACGTCTGGGGCCAGGGGACCCCGGTCACCGTCGCCTCA  338
D  93.8% (15/16)    IGHD2-2*01   19   ...-----------------------------------------------------------------  21
J  90.6% (48/53)    IGHJ6*02     10   ---------------...A......T.................A......A...........T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_310517

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           358     4e-101
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAC	TATTACTATCGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTATTACTATCGTTCGGGGAGTTATTTTGACTAC	ARGHYYYRSGSYFDY	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	113	1	0	99.1
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  N  W  I  R  Q  H  P  G  K  G  
                    Query_2876   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  96.0% (239/249)  IGHV4-31*02  50   .....TCC...A..................G.............................G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_2876   94   TGGAGTGGATTGGACACATCTATTACAGCGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATTTCAGTAGACACGTCTA  183
V  96.0% (239/249)  IGHV4-31*02  140  .............GT.............T............................................A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  Y  Y  Y  R  S  
                    Query_2876   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTATTACTATCGTTCGG  273
V  96.0% (239/249)  IGHV4-31*02  230  .....................................................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  95.8% (23/24)    IGHD3-10*01  2    --------------------------------------------------------------------------.........G......  17

                                      ---------------->                                  
                                      G  S  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2876   274  GGAGTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  95.8% (23/24)    IGHD3-10*01  18   ........-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    --------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_310516

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           308     4e-86
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTTGTGG	TACTCTGGTTCGGGGAGT	AAAACCCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTTGTGGTACTCTGGTTCGGGGAGTAAAACCCATTTTGACTAC	ARGLWYSGSGSKTHFDY	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	220	23	0	90.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  S  G  G  S  I  N  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  Q  L  E  
                    Query_2877   4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCAATACCTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAACAACTGGAGT  93
V  90.5% (220/243)  IGHV4-59*01  50   .....TCC...A.....A.....................G..GT...................................GGG........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  S  Y  S  G  S  T  T  Y  S  P  S  L  K  S  R  V  T  M  S  I  D  T  S  K  N  
                    Query_2877   94   GGATTGGTTATATCTCTTACAGTGGGAGCACCACTTATAGCCCCTCCCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCTAAGAACC  183
V  90.5% (220/243)  IGHV4-59*01  140  .......G.......A.................AC..C.A...........................A...G..........C.......  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  W  Y  S  G  S  G  S  
                    Query_2877   184  AGTTCTCCCTGAAGCTGCGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGTTTGTGGTACTCTGGTTCGGGGAGTA  273
V  90.5% (220/243)  IGHV4-59*01  230  .................A..........C..T...............................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  94.4% (17/18)    IGHD3-10*01  5    -----------------------------------------------------------------------....A.............-  22

                                      ---------------->                                  
                                      K  T  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2877   274  AAACCCATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (43/43)   IGHJ4*02     6    --------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_149160

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           336     1e-94
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTAGGGAGGCTCGC	TAGTAGTGGT	AACCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGGAGGCTCGCTAGTAGTGGTAACCCCCTTGACGAC	ARVGRLASSGNPLDD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  A  G  D  S  L  T  S  S  R  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_2878   1    ACCCTGTCCCTCACCTGCACTGTCGCTGGTGACTCCCTCACCAGTAGTCGATACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.2% (232/249)  IGHV4-39*01  49   ........................T......G....A...G.......A.T.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  Q  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  T  R  I  T  I  S  V  D  T  S 
                    Query_2878   91   CTCCAGTGGATTGGAAATATCTATTATAGTGGAAGTACCTACTACAACCCGTCCCTCAAGACTCGAATCACCATATCCGTGGACACGTCC  180
V  93.2% (232/249)  IGHV4-39*01  139  ..GG..........G.G...............G..C.........................G....G.............A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  V  G  R  L  A  S  S 
                    Query_2878   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCAGACACGGCTCTGTATTACTGTGCGAGAGTAGGGAGGCTCGCTAGTAGT  270
V  93.2% (232/249)  IGHV4-39*01  229  ..........................C........................G.................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (10/10)   IGHD3-22*01  13   -----------------------------------------------------------------------------------.......  19

                                      ----------------->                                  
                                       G  N  P  L  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2878   271  GGTAACCCCCTTGACGACTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  322
D  100.0% (10/10)   IGHD3-22*01  20   ...-------------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    ----------.....T...................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_110905

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*07                                                                                           358     4e-101
IGHD6-19*01                                                                                           16.1    2.3   
IGHJ2*01                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*07	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAAG	AGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQEWLPGDWYFDL	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  T  Y  Y  W  G  W  I  R  Q  A  P  G  K  G 
                    Query_2879   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTACTTACTACTGGGGCTGGATCCGCCAGGCCCCAGGGAAGGGG  90
V  96.0% (239/249)  IGHV4-39*07  49   .................................................G.........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  Y  S  G  S  T  Y  Y  Y  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_2879   91   CTGGAGTGGATTGGGACTATCTATTATAGTGGGAGCACCTATTACTACCCGTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCC  180
V  96.0% (239/249)  IGHV4-39*07  139  ................G........................C...A................................G...........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  F  L  P  A  V  Q  E 
                    Query_2879   181  AAGAACCAGTTCTCCCTGAAGATGACCTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGATTCCTCCCCGCGGTGCAAGAG  270
V  96.0% (239/249)  IGHV4-39*07  229  .....................C...G...............G.........G.................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD6-19*01  10   ----------------------------------------------------------------------------------------..  11

                                      3-IMGT----------------------->                                  
                                       W  L  P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_2879   271  TGGCTGCCAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCGTCAG  334
D  100.0% (8/8)     IGHD6-19*01  12   ......----------------------------------------------------------  17
J  96.1% (49/51)    IGHJ2*01     3    -------------......................................A.......C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_299342

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            360     1e-101
IGHD4-17*01                                                                                           23.8    0.011 
IGHJ2*01                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	CGAGACCTCTG	TACGGTGACTAC	TT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATACGAGACCTCTGTACGGTGACTACTTCTGGTACTTCGATCTC	AKDTRPLYGDYFWYFDL	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	252	10	10	0	0	100
Total	N/A	N/A	252	241	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2880   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  95.6% (241/252)  IGHV3-9*01   47   .....................C....................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  E  I  V  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2880   91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGGTGAAATTGTCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (241/252)  IGHV3-9*01   137  ................................AGC..A.G..................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  P  Y  L  Q  L  N  T  L  T  A  E  D  T  A  F  Y  Y  C  A  K  D  T  R  P  L  Y  G  
                    Query_2880   181  AGAACTCCCCGTATCTGCAACTGAACACTCTGACAGCTGAGGACACGGCCTTCTATTACTGTGCAAAAGATACGAGACCTCTGTACGGTG  270
V  95.6% (241/252)  IGHV3-9*01   227  .........T..........A......G.....G..................G...................------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (12/12)   IGHD4-17*01  5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                      D  Y  F  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2880   271  ACTACTTCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  327
D  100.0% (12/12)   IGHD4-17*01  12   .....----------------------------------------------------  16
J  100.0% (50/50)   IGHJ2*01     4    -------..................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_149163

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            363     1e-102
IGHD3-10*01                                                                                           21.8    0.041 
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	GGATG	TGGTTCGGGGA	CC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGAAAAGATAGGATGTGGTTCGGGGACCACTACTACGGTATGGACGTC	GKDRMWFGDHYYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	252	10	9	1	0	90
Total	N/A	N/A	252	242	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  N  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2881   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATAATTATGCCATGCACTGGGTCCGACAAGCTCCAGGGAAGGGCCTGG  90
V  96.0% (242/252)  IGHV3-9*01   47   ............................................G......................G......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  D  G  G  R  I  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2881   91   AGTGGGTCTCAGGTATTAGTTGGGATGGTGGTAGGATAGCCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (242/252)  IGHV3-9*01   137  .......................A..A.......C....G..................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  T  E  D  T  A  L  Y  Y  C  G  K  D  R  M  W  F  G  D  
                    Query_2881   181  AGAACTCCCTGTATCTGCAAATGGACAGTCTGAGAACTGAGGACACGGCCTTGTATTATTGTGGAAAAGATAGGATGTGGTTCGGGGACC  270
V  96.0% (242/252)  IGHV3-9*01   227  .......................A...........G......................C....C........------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (11/11)   IGHD3-10*01  10   -----------------------------------------------------------------------------...........--  20

                                      T------------------>                                 
                                      H  Y  Y  G  M  D  V  W  G  L  G  T  T  V  T  V  S  S 
                    Query_2881   271  ACTACTACGGTATGGACGTCTGGGGCCTAGGGACCACGGTCACCGTCTCGTCA  323
J  96.2% (51/53)    IGHJ6*02     10   ...........................A.....................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_149164

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_2882   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_2882   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_2882   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_2882   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_149165

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           374     7e-106
IGHD3-3*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	242	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2883   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (242/245)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_2883   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.8% (242/245)  IGHV4-34*01  139  .........................................................................T................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_2883   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  98.8% (242/245)  IGHV4-34*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2883   271  GCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_149166

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           321     6e-90
IGHD1-26*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGCCCTTTTA	TGGGGGCTAC	ATGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGCCCTTTTATGGGGGCTACATGGATTGACTAC	ARCPFMGATWIDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	21	24	4	4	0	0	100
CDR1-IMGT	25	48	24	23	1	0	95.8
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	20	4	0	83.3
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	223	214	9	0	96


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  S  F  G  L  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  Y  Y  D
                    Query_2884   21   GTCTGGATTCACCTTCAGTAGCTTTGGCCTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAAATATCTACTATGA  110
V  96.0% (214/223)  IGHV3-33*01  72   .......................A....A...............................................GT...A.GG.....  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  N  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_2884   111  TGGAAATAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAGATGAA  200
V  96.0% (214/223)  IGHV3-33*01  162  .....G..............................................................................A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------CDR3-IMGT-------------->              
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  C  P  F  M  G  A  T  W  I  D  Y  W  G  Q  G  T
                    Query_2884   201  CAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGATGCCCTTTTATGGGGGCTACATGGATTGACTACTGGGGCCAGGGAAC  290
V  96.0% (214/223)  IGHV3-33*01  252  ...........................................-----------------------------------------------  294
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  90.0% (9/10)     IGHD1-26*01  8    -----------------------------------------------------....A.....---------------------------  17
J  100.0% (42/42)   IGHJ4*02     7    --------------------------------------------------------------------......................  28

                                                          
                                        L  V  T  V  S  S  
                    Query_2884   291  CCTGGTCACCGTCTCCTCAG  310
J  100.0% (42/42)   IGHJ4*02     29   ....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_149167

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         360     1e-101
IGHD3-10*01                                                                                           10.3    115   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GA	GGGGA	CAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAGGGGACATTATGGACGTC	ARGGDIMDV	244	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_2885     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  H  S  G  L  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  R  S 
                    Query_2885     91   CTGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACAGGTCC  180
V  96.0% (240/250)  IGHV4-30-2*01  139  ..............G......T...........AG..C.T...A......................G.......................  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                         K  N  Q  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  D  I  M  D  V 
                    Query_2885     181  AAGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAGGGGACATTATGGACGTC  270
V  96.0% (240/250)  IGHV4-30-2*01  229  ...........C.......A..................................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01    16   ------------------------------------------------------------------------.....-------------  20
J  100.0% (43/43)   IGHJ6*02       20   --------------------------------------------------------------------------------..........  29

                                                                         
                                         W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2885     271  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  303
J  100.0% (43/43)   IGHJ6*02       30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_219629

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         297     7e-83
IGHD3-9*01                                                                                            14.1    8.7  
IGHJ2*01                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-9*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGACCGATAC	TGACTGG	GGTGGTCACACAGGGCTCTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACCGATACTGACTGGGGTGGTCACACAGGGCTCTTCTGGTACTTCGATCTC	AKTDTDWGGHTGLFWYFDL	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	100	14	0	87.7
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	217	27	0	88.9


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  V  V  S  G  Y  S  I  N  N  G  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  L 
                    Query_2886     1    ACCCTGTCCCTCACCTGCGTTGTGTCTGGTTACTCCATCAACAATGGTTACTACTGGGGCTGGCTCCGGCAGCCCCCAGGAAAGGGGCTG  90
V  88.9% (217/244)  IGHV4-38-2*01  49   ...................C...C................G..G...................A................G.........  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  V  Y  H  R  G  D  A  Y  Y  N  P  S  L  K  S  *  V  T  V  S  M  D  T  S  S 
                    Query_2886     91   GAGTGGATTGGGAGTGTCTATCATCGCGGGGACGCGTACTACAATCCGTCCCTCAAGAGTTGAGTCACCGTCTCAATGGACACGTCCAGT  180
V  88.9% (217/244)  IGHV4-38-2*01  139  ...............A........A.T...AG.A.C........C...............C........A.A...G.A..........AG  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                         N  Q  V  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  T  D  T  D  W  G  G  H 
                    Query_2886     181  AATCAGGTCTCCCTGAGCCTGAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAAGACCGATACTGACTGGGGTGGTCAC  270
V  88.9% (217/244)  IGHV4-38-2*01  229  ..C...T.........AG.....C...............................A........--------------------------  292
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-9*01     15   --------------------------------------------------------------------------.......---------  21

                                        MGT----------------------->                                  
                                         T  G  L  F  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2886     271  ACAGGGCTCTTCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  331
J  100.0% (50/50)   IGHJ2*01       4    -----------..................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_219628

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           10.3    138   
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	GGAGC	ACATCAATGCCTCGGACGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGATCGGAGCACATCAATGCCTCGGACGGACTGGTGCGACCCC	GEIGAHQCLGRTGATP	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	9	76	69	68	0	1	98.6
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	110	4	0	96.5
CDR3-IMGT (germline)	290	297	8	7	1	0	87.5
Total	N/A	N/A	290	278	11	1	95.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G   P  Q  *  R  S  P  A  R  L  L  V  T  R  L  P  V  M
                    Query_2887   9    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGG-CCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACGTTTACCAGTTAT  97
V  95.9% (278/290)  IGHV1-18*01  7    .......................................G.....................................C........C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                        V  S  A  G  C  A  R  P  L  D  K  G  L  S  G  W  G  G  S  A  L  T  M  V  T  Q  T  M  H  R
                    Query_2887   98   GGTATCAGCTGGGTGCGCCAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCACTTACAATGGTGACACAAACTATGCACAG  187
V  95.9% (278/290)  IGHV1-18*01  97   .................A................................A.........G...........A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                        S  S  R  A  E  S  P  *  P  Q  T  H  P  R  A  Q  P  T  W  R  *  G  A  *  D  L  T  T  R  P
                    Query_2887   188  AAGTTCCAGGGCAGAGTCACCCTGACCACAGACACATCCACGAGCACAGCCTACATGGAGGTGAGGAGCCTGAGATCTGACGACACGGCC  277
V  95.9% (278/290)  IGHV1-18*01  187  ...C.................A......................................C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                        C  I  I  V  G  E  I  G  A  H  Q  C  L  G  R  T  G  A  T  P  G  A  R  E  P  W  S  P  S  P
                    Query_2887   278  GTGTATTATTGTGGGAGAGATCGGAGCACATCAATGCCTCGGACGGACTGGTGCGACCCCTGGGGCGAGGGAACCCTGGTCACCGTCTCC  367
V  95.9% (278/290)  IGHV1-18*01  277  ........C....C......----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (5/5)     IGHD1-26*01  10   ----------------------.....---------------------------------------------------------------  14
J  95.7% (45/47)    IGHJ5*02     4    ----------------------------------------------......T.............C.......................  47

                                         
                                         
                    Query_2887   368  TCA  370
J  95.7% (45/47)    IGHJ5*02     48   ...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_219621

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2888   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2888   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_2888   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2888   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_219627

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCCCGGCAGG	GTGGGATCTACT	TG	ACGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTC	ARHGPAGWDLLDAMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	270	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  A  K  K  P  G  E  S  L  T  I  S  C  R  G  S  G  Y  N  F  N  S  N
                    Query_2889   1    GCAGCTGGTGCAGTCTGGAGCAGAGGCGAAAAAGCCGGGGGAGTCTCTGACAATCTCCTGTAGGGGTTCTGGATACAACTTTAACAGTAA  90
V  92.8% (270/291)  IGHV5-51*01  6    ..........................T.........C.............AG..........A..............G.....C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_2889   91   CTGGATCGGATGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACCAGATATAGGCC  180
V  92.8% (270/291)  IGHV5-51*01  96   .........C..................................................T.......................C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  T  A  D  K  S  T  T  T  A  Y  L  R  W  S  S  L  K  A  S  D  T  A
                    Query_2889   181  GTCCTTCCAAGGCCACGTCACCATTACAGCCGACAAGTCCACCACCACCGCCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  92.8% (270/291)  IGHV5-51*01  186  ...............G........CT...............T..G..............A..............................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        T  Y  Y  C  A  R  H  G  P  A  G  W  D  L  L  D  A  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_2889   271  CACTTATTACTGTGCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  92.8% (270/291)  IGHV5-51*01  276  ..TG.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD1-26*01  7    ---------------------------------......G.....---------------------------------------------  18
J  97.9% (46/47)    IGHJ6*02     16   -----------------------------------------------...G.......................................  58

                                          
                                        S 
                    Query_2889   361  CTCA  364
J  97.9% (46/47)    IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_219625

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD2-15*01                                                                                           10.3    136   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CGAGAAG	GGTGG	CGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGACACGAGAAGGGTGGCGGGGCGAACGACTAC	VRHEKGGGANDY	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	298	8	6	2	0	75
Total	N/A	N/A	296	277	19	0	93.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P 
                    Query_2890   3    GAGGTCCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCC  92
V  93.6% (277/296)  IGHV5-51*01  1    .....G...................................C........................................GC...A..  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  A  D  S  D  T  R  Y 
                    Query_2890   93   AATTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAACATCTATCCTGCTGACTCTGACACCAGATAC  182
V  93.6% (277/296)  IGHV5-51*01  91   .GC.......................................................T...........G.........T.........  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  L  T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 
                    Query_2890   183  AGTCTGACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGAC  272
V  93.6% (277/296)  IGHV5-51*01  181  ..C.C.T.....C.............................................................C...............  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-------------CDR3-IMGT------------>                                
                                       T  A  V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2890   273  ACCGCCGTGTATTATTGTGTCAGACACGAGAAGGGTGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  358
V  93.6% (277/296)  IGHV5-51*01  271  ......A.......C....CG.....------------------------------------------------------------  296
                                       T  A  M  Y  Y  C  A  R                                                               
D  100.0% (5/5)     IGHD2-15*01  14   ---------------------------------.....------------------------------------------------  18
J  97.4% (37/38)    IGHJ4*02     9    ------------------------------------------------....................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_219624

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           274     7e-76
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACTTTGACTTC	ARVSTSAYYFDF	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	209	34	0	86


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  Q  P  P  G  K  G  L  E  
                    Query_2891   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGACAACCCCCAGGAAAGGGACTGGAGT  93
V  86.0% (209/243)  IGHV4-59*01  50   .....TCC...A....................T........A.....T.C.........A....G..G........G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  S  F  D  T  S  K  R  
                    Query_2891   94   GGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGTCCTTTGACACGTCCAAGAGGC  183
V  86.0% (209/243)  IGHV4-59*01  140  ......GGT....C...........G.G..C...C................A..G............A..AG.A.............AC.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  Y  Y  F  D  
                    Query_2891   184  AGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATACTACTTTGACT  273
V  86.0% (209/243)  IGHV4-59*01  230  ............A....AGC..........................G............A...---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD2-2*01   17   --------------------------------------------------------------------......----------------  22
J  91.3% (42/46)    IGHJ4*02     1    ------------------------------------------------------------------------------............  12

                                      ->                                
                                      F  W  G  R  G  T  L  V  V  V  S  S
                    Query_2891   274  TCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  307
J  91.3% (42/46)    IGHJ4*02     13   A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_218575

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           330     1e-92
IGHD2-21*01                                                                                           12.2    32   
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-21*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGCACAAG	TGTGGT	CCA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGCACAAGTGTGGTCCATGATGCTATTGATATC	ARGRTSVVHDAIDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2892   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGCACTTATAGCATGAACTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-21*01  47   ...................................A.......T.GC.............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  G  S  S  G  F  I  Y  Y  A  N  S  V  E  G  R  I  A  I  S  R  D  N  A  
                    Query_2892   91   AGTGGGTCTCATCTATTACTGGTAGTAGTGGTTTCATATACTACGCAAACTCAGTGGAGGGCCGAATCGCCATCTCCAGAGACAACGCCA  180
V  92.4% (230/249)  IGHV3-21*01  137  .............C....G.A........A...A.............G........A........T..A.....................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  S  N  L  R  A  E  D  S  A  V  Y  Y  C  A  R  G  R  T  S  V  V  H  
                    Query_2892   181  AGAACTCACTGTATCTGCAAATGAGTAACCTGAGAGCCGAGGACTCGGCTGTTTATTACTGTGCGAGAGGTCGCACAAGTGTGGTCCATG  270
V  92.4% (230/249)  IGHV3-21*01  227  ........................AC.G................A.......G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*01  8    -------------------------------------------------------------------------------......-----  13
J  98.0% (49/50)    IGHJ3*02     1    ----------------------------------------------------------------------------------------..  2

                                      ------------->                                  
                                      D  A  I  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2892   271  ATGCTATTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  318
J  98.0% (49/50)    IGHJ3*02     3    .....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_218576

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           424     8e-121
IGHD1-7*01                                                                                            12.2    34    
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCTG	GGAACT	CCTGACA	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCTGGGAACTCCTGACAACTCC	ARELGTPDNS	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	281	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  Q  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  R  Y
                    Query_2893   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGCAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGATA  90
V  96.6% (281/291)  IGHV1-46*01  6    ..................G.........A..........................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  L  I  N  P  S  G  G  S  T  N  Y  A  Q
                    Query_2893   91   CTATATGCACTGGGTGCGGCAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACTAATCAACCCTAGTGGTGGTAGCACGAATTACGCACA  180
V  96.6% (281/291)  IGHV1-46*01  96   ..................A.................................A.........................A.GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  D  L  S  S  L  R  S  E  D  T  A
                    Query_2893   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGACCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  96.6% (281/291)  IGHV1-46*01  186  ............................................................G.............................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        M  Y  Y  C  A  R  E  L  G  T  P  D  N  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2893   271  CATGTATTACTGTGCGAGAGAGCTGGGAACTCCTGACAACTCCTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  347
V  96.6% (281/291)  IGHV1-46*01  276  .G...................--------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                           
D  100.0% (6/6)     IGHD1-7*01   10   -------------------------......----------------------------------------------  15
J  94.9% (37/39)    IGHJ4*02     10   --------------------------------------...A..................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_218577

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           296     2e-82
IGHD3-16*01                                                                                           12.2    31   
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TATTG	CACAGGGGCTTCAG	GTTATG	GA	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGGGCTTCAGGTTATGGATGGCTCGACCCC	TGASGYGWLDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	241	113	99	14	0	87.6
Total	N/A	N/A	241	215	26	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  M  S  D  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2894   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGACTCACAATGAGTGACTACGGCATGCATTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  89.2% (215/241)  IGHV3-33*03  47   ................................T....CT.C...AG...T........C..........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  K  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_2894   91   AATGGGTGGCAGTTATATGGTATGATGGAATTAAAAAATTCTATGCAGATTCCGTGAAGGGCCGATTCACCATTTCTAGAGACGACTCCA  180
V  89.2% (215/241)  IGHV3-33*03  137  .G............................G...T....A.........C.......................C..C......A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  D  S  L  R  A  D  D  T  A  L  Y  Y  C  T  G  A  S  G  Y  G  W  L  
                    Query_2894   181  AGAACACCCTATTTCTGCAAATGGACAGTCTGAGAGCCGACGACACGGCTCTATATTATTGCACAGGGGCTTCAGGTTATGGATGGCTCG  270
V  89.2% (215/241)  IGHV3-33*03  227  .......G..G.A..........A....C...........G.........G.G.....C..-----------------------------  287
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                
D  100.0% (6/6)     IGHD3-16*01  24   ---------------------------------------------------------------------------......---------  29
J  95.7% (44/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------...T...  12

                                      ---->                                  
                                      D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_2894   271  ACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  309
J  95.7% (44/46)    IGHJ5*02     13   .................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_218571

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_2895   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  91.0% (222/244)  IGHV4-59*01  50   .....TCC...A..................G........G.AG..A......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S  
                    Query_2895   94   GGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGCC  183
V  91.0% (222/244)  IGHV4-59*01  140  .......G......T..........G.GC.............................A.T......A...................A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F  
                    Query_2895   184  AGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTTG  273
V  91.0% (222/244)  IGHV4-59*01  230  ............A.........................A.......G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------------------------.......C.G..A..  15

                                      ------------------->                                  
                                      G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_2895   274  GTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  327
D  83.3% (15/18)    IGHD5-18*01  16   ...---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    -----...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_218572

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*02                                                                                            344     7e-97
IGHD3-16*01                                                                                           12.2    36   
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACCC	TTTGGG	TGGGGCCTCTTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACCCTTTGGGTGGGGCCTCTTTTACTTTGGCTAT	AREPFGWGLFYFGY	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	70	1	0	98.6
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	19	5	0	79.2
FR3-IMGT	175	288	114	91	23	0	79.8
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	292	256	36	0	87.7


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T  D  
                    Query_2896   5    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCACCGACC  94
V  87.7% (256/292)  IGHV1-2*02   5    ...................G..........................................................C........G.T  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      H  Y  I  H  W  E  R  Q  A  P  G  H  G  P  E  W  M  G  W  I  N  P  K  T  G  R  I  S  Y  A  
                    Query_2896   95   ACTATATCCACTGGGAGCGACAGGCCCCTGGACATGGGCCTGAGTGGATGGGATGGATCAACCCTAAGACTGGCCGCATAAGTTATGCAC  184
V  87.7% (256/292)  IGHV1-2*02   95   .......G.......T..................A....T...........................C.G...TG...C..AC.......  184
                                      Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  R  F  E  G  R  A  T  M  T  R  D  T  S  M  T  T  V  Y  M  E  L  S  S  L  A  S  G  D  T  
                    Query_2896   185  AGAGATTTGAAGGCCGGGCCACGATGACCAGGGACACGTCCATGACTACAGTCTACATGGAGTTGTCGAGTCTAGCATCTGGCGACACGG  274
V  87.7% (256/292)  IGHV1-2*02   185  ...AG...C.G...A...T...C....................C.GC....C..........C..AGC..G..GAG.....A........  274
                                      Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                  
                                      A  V  Y  Y  C  A  R  E  P  F  G  W  G  L  F  Y  F  G  Y  W  G  P  G  T  L  V  P  V  S  P  
                    Query_2896   275  CCGTTTATTACTGTGCGAGAGAACCCTTTGGGTGGGGCCTCTTTTACTTTGGCTATTGGGGCCCGGGAACCCTGGTCCCCGTCTCCCCAG  364
V  87.7% (256/292)  IGHV1-2*02   275  ....G.................--------------------------------------------------------------------  296
                                      A  V  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  15   --------------------------......----------------------------------------------------------  20
J  89.1% (41/46)    IGHJ4*02     3    --------------------------------------------.......A...C.......A.............A........T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_218578

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           321     7e-90
IGHD6-19*01                                                                                           12.2    32   
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTAAAGACCCCGGAGGGC	GGCTGG	C	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTAAAGACCCCGGAGGGCGGCTGGCACTACTACTACGGCTTGGACGTC	ARVKTPEGGWHYYYGLDV	232	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	10	1	0	90.9
CDR1-IMGT	19	42	24	20	4	0	83.3
FR2-IMGT	43	93	51	51	0	0	100
CDR2-IMGT	94	117	24	21	3	0	87.5
FR3-IMGT	118	231	114	110	4	0	96.5
CDR3-IMGT (germline)	232	236	5	5	0	0	100
Total	N/A	N/A	229	217	12	0	94.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  S  F  S  D  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  
                    Query_2897   8    GTGCAGTCTCTGGATTCAGCTTCAGTGACTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTA  97
V  94.8% (217/229)  IGHV3-21*01  65   ......C...........C.......AG.....G........................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_2897   98   GCAGTGGGAGTAGTTACATATACTACGCAGACTCAGTAAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGC  187
V  94.8% (217/229)  IGHV3-21*01  155  .T...A.T.............................G....................................................  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------------CDR3-IMGT--------------
                                      Q  I  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  K  T  P  E  G  G  W  H  Y  Y  Y  G  
                    Query_2897   188  AAATTAACAGCCTGAGAGCCGACGACACGGCTGTATATTACTGTGCGAGGGTAAAGACCCCGGAGGGCGGCTGGCACTACTACTACGGCT  277
V  94.8% (217/229)  IGHV3-21*01  245  ....G.................G...........G..............-----------------------------------------  293
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (6/6)     IGHD6-19*01  13   --------------------------------------------------------------------......----------------  18
J  96.4% (54/56)    IGHJ6*02     7    ---------------------------------------------------------------------------.............TA  21

                                      ------->                                 
                                      L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2897   278  TGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  96.4% (54/56)    IGHJ6*02     22   .........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_218579

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           392     2e-111
IGHD3-9*01                                                                                            12.2    35    
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	TATCCTCATGCCCCG	CGATAT	ATCAAGGACCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTATCCTCATGCCCCGCGATATATCAAGGACCTTC	AILMPRDISRTF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	268	17	0	94


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  M  V  S  C  E  A  S  G  G  S  F  N  T  Y
                    Query_2898   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGATGGTCTCCTGCGAGGCTTCTGGAGGCTCCTTCAACACCTA  90
V  94.0% (268/285)  IGHV1-69*01  6    ..................G...............................A..........A..............A......G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  M  F  G  T  A  K  Y  A  Q
                    Query_2898   91   TGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGCCTTGAGTGGATGGGAGGGATCATCCCTATGTTTGGTACAGCAAAGTACGCACA  180
V  94.0% (268/285)  IGHV1-69*01  96   ........G...........................G.............................C..............C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  V  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_2898   181  GAAATTTCAGGGAAGAGTCACGGTTACCGCGGACGAATCCACGAGCACTGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  94.0% (268/285)  IGHV1-69*01  186  ...G..C.....C.........A.........................A.........................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  F  C  A  I  L  M  P  R  D  I  S  R  T  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2898   271  CGTCTATTTCTGTGCTATCCTCATGCCCCGCGATATATCAAGGACCTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  94.0% (268/285)  IGHV1-69*01  276  ...G....A......--------------------------------------------------------------------  290
                                        V  Y  Y  C  A                                                                    
D  100.0% (6/6)     IGHD3-9*01   7    ------------------------------......-----------------------------------------------  12
J  100.0% (35/35)   IGHJ4*02     14   ------------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_210746

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            360     1e-101
IGHD3-16*01                                                                                           12.2    32    
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGTGTCGATGACCCGC	TGGGGG	G	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGTGTCGATGACCCGCTGGGGGGCTGGTTCGACCCC	ARDGVDDPLGGWFDP	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  N  N  W  W  S  W  V  R  L  P  P  G  K  G  L 
                    Query_2899   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAATAACTGGTGGAGTTGGGTCCGCCTGCCCCCAGGGAAGGGGCTG  90
V  96.4% (239/248)  IGHV4-4*02   49   ..............................................G.......................A...................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  G  I  Y  H  S  G  V  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_2899   91   GAGTGGATTGGGGGAATCTATCATAGTGGGGTCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTTGACAAGTCCAAG  180
V  96.4% (239/248)  IGHV4-4*02   139  .............A................AG.............................................A............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  H  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  V  D  D  P  L  G 
                    Query_2899   181  AACCACTTCTCCCTGAACCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGACGGTGTCGATGACCCGCTGGGG  270
V  96.4% (239/248)  IGHV4-4*02   229  .....G...........G................................G.................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD3-16*01  17   -------------------------------------------------------------------------------------.....  21

                                      -------------->                                  
                                       G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2899   271  GGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
D  100.0% (6/6)     IGHD3-16*01  22   .------------------------------------------------  22
J  100.0% (47/47)   IGHJ5*02     5    --...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_210744

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            329     3e-92
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCTA	TATTACTATGAAAGTAGTGGTT	CAT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCTATATTACTATGAAAGTAGTGGTTCATACTTCTTTGACTAC	ARSLYYYESSGSYFFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	228	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  D  S  I  S  N  S  R  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_2900   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCATCAGTAATTCTAGGTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  92.7% (228/246)  IGHV4-4*02   49   ...............................G.........C.G.AG..AC...................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  H  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  K  S  K 
                    Query_2900   91   GAGTGGATTGGAGACATCCATCATAGTGGGACCACCAACTACAATCCGTCCCTCAAGAGTCGAGTCACCCTCTCAGTAGACAAGTCCAAG  180
V  92.7% (228/246)  IGHV4-4*02   139  ...........G..A...T............G............C........................A.A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       K  R  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  Y  E  S  S 
                    Query_2900   181  AAGCGGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAAGCCTATATTACTATGAAAGTAGT  270
V  92.7% (228/246)  IGHV4-4*02   229  ..C.A.................G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  95.5% (21/22)    IGHD3-22*01  2    ------------------------------------------------------------------------...........T......  19

                                      -------------------->                                  
                                       G  S  Y  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2900   271  GGTTCATACTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  95.5% (21/22)    IGHD3-22*01  20   ....---------------------------------------------------  23
J  97.9% (47/48)    IGHJ4*02     1    -------...A............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_210742

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            360     1e-101
IGHD2-15*01                                                                                           21.8    0.042 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AGG	AGGCTATTGTAGTG	CTACCTACTGTGTTATAGGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAAAGAAGGAGGCTATTGTAGTGCTACCTACTGTGTTATAGGTTACTTTGACTCC	VKEGGYCSATYCVIGYFDS	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  L  A  P  G  R  G  L  
                    Query_2901   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCTAGCTCCAGGGAGGGGCCTGG  90
V  96.0% (240/250)  IGHV3-9*01   47   .....................................................................A...........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  Y  N  G  G  I  I  G  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  A  
                    Query_2901   91   AGTGGGTCTCAGGTATTAGTTACAATGGTGGTATCATAGGCTATGCGGACTCTGTGAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-9*01   137  .....................GG...A......G...............................T........................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  E  G  G  Y  C  S  A  
                    Query_2901   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCCTATATTACTGTGTAAAAGAAGGAGGCTATTGTAGTGCTA  270
V  96.0% (240/250)  IGHV3-9*01   227  ..................................................T.G..........C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD2-15*01  1    -------------------------------------------------------------------------...A..........---  14

                                      -IMGT----------------------->                                  
                                      T  Y  C  V  I  G  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2901   271  CCTACTGTGTTATAGGTTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
J  97.8% (45/46)    IGHJ4*02     3    -----------------..........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_132905

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD2-2*01                                                                                            23.8    0.012 
IGHJ5*01                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATG	GGATATTGTAGCAGT	GTCATCTGTGATGGACCT	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGATATTGTAGCAGTGTCATCTGTGATGGACCTGACTCC	ARHMGYCSSVICDGPDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  T  F  G  T  Y
                    Query_2902   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTGGCACCTA  90
V  94.5% (275/291)  IGHV5-51*01  6    ....................................C........................A...............G....AC..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  K  Y  S  P
                    Query_2902   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCCGGTGACTCTGAGACGAAATACAGTCC  180
V  94.5% (275/291)  IGHV5-51*01  96   ........G......................................................T...........T..C.G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2902   181  GTCCTTCCGAGGCCAGGTCACCATATCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (275/291)  IGHV5-51*01  186  ........A...............C....C...............C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  M  G  Y  C  S  S  V  I  C  D  G  P  D  S  W  G  H  G  T  L  V  T  V
                    Query_2902   271  CATGTATTACTGTGCGAGACATATGGGATATTGTAGCAGTGTCATCTGTGATGGACCTGACTCCTGGGGCCACGGAACCCTGGTCACCGT  360
V  94.5% (275/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  93.3% (14/15)    IGHD2-2*01   2    -------------------------...........T...--------------------------------------------------  16
J  97.5% (39/40)    IGHJ5*01     12   ----------------------------------------------------------..............A.................  43

                                              
                                        S  S  
                    Query_2902   361  CTCCTCAG  368
J  97.5% (39/40)    IGHJ5*01     44   ........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_210749

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD6-13*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	ARHRYLGPRQQATENDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  Q  G  S  G  Y  T  F  T  T  Y
                    Query_2903   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTACCACCTA  90
V  95.9% (279/291)  IGHV5-51*01  6    ..........................................G..................A...............G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  P  R  Y  S  P
                    Query_2903   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAGTCATCTATCCTGGTGACTCTGATCCCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G..........................................GA.......................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  G  S  S  L  K  A  S  D  T  A
                    Query_2903   181  GTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTTGCAGGGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  ......................A................................C.....T....C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_2903   271  CATGTATTACTGTGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  95.9% (279/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-13*01  8    ---------------------------------------.......--------------------------------------------  14
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_2903   361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_173626

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           380     1e-107
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	287	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	73	71	66	5	0	93
CDR1-IMGT	74	97	24	20	4	0	83.3
FR2-IMGT	98	148	51	50	1	0	98
CDR2-IMGT	149	172	24	20	4	0	83.3
FR3-IMGT	173	286	114	105	9	0	92.1
CDR3-IMGT (germline)	287	293	7	6	1	0	85.7
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  
                    Query_2904   3    TGCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATC  92
V  91.8% (267/291)  IGHV5-51*01  5    .....................C........A.....................G.........A......C.........C.......GCT  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      H  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  
                    Query_2904   93   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCC  182
V  91.8% (267/291)  IGHV5-51*01  95   ....................................................G.......A.....G.......G....C.....C....  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  M  S  A  D  K  P  I  S  T  A  Y  L  Q  W  S  N  P  K  A  S  D  T  
                    Query_2904   183  CGTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGCCCATCAGCACCGCCTACCTGCAATGGAGCAACCCGAAGGCCTCGGACACCG  272
V  91.8% (267/291)  IGHV5-51*01  185  ................G........C............T......................G.......G..T.................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------CDR3-IMGT----------->                                  
                                      A  L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_2904   273  CCTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  353
V  91.8% (267/291)  IGHV5-51*01  275  ..A.......C.....G....------------------------------------------------------------  295
                                      A  M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   -----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    ------------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_173627

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           272     2e-75
IGHD7-27*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD7-27*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGACAAGGGG	ACTGGGGA	N/A	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAAGGGGACTGGGGATGGTACTTCGATCTC	ARRQGDWGWYFDL	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	60	33	26	4	3	78.8
FR2-IMGT	61	111	51	43	8	0	84.3
CDR2-IMGT	112	129	21	12	6	3	57.1
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	252	217	29	6	86.1


Alignments

                                      <--------FR1-IMGT---------><-----------CDR1-IMGT-----------><--------------------FR2-IMGT-
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  S  A  G  H  Y  W  S  W  I  R  Q  T  P  R  K 
                    Query_2905   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGCAGTGCTGGTCACTATTGGAGTTGGATCCGCCAGACCCCCAGAAAG  90
V  86.1% (217/252)  IGHV4-31*03  49   ...............................G............---..G....T....C.....C............CA...AG.G...  135
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S     G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K 

                                      --------------------><-----CDR2-IMGT-----><-----------------------------------------------
                                       G  L  E  W  M  G  Y  I  F  Y  T  V     P  Y  Y  N  P  S  L  K  S  R  L  T  M  S  G  D  T 
                    Query_2905   91   GGCCTGGAGTGGATGGGTTACATCTTTTATACTGTGC---CATACTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCAGGAGACACC  177
V  86.1% (217/252)  IGHV4-31*03  136  ..............T..G.......A...C.G..G.AGCA.C..............C............G.T.....A....T......G  225
                                       G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T 

                                      -----FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT
                                       A  K  N  Q  F  S  L  R  L  T  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  R  Q  G  D  W  G 
                    Query_2905   178  GCTAAGAACCAGTTTTCCCTGAGGCTGACCTCTGTGACTTCCGCGGACACGGCCGTGTATTACTGTGCGAGACGACAAGGGGACTGGGGA  267
V  86.1% (217/252)  IGHV4-31*03  226  T.............C.......A.....G..........G................................------------------  297
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                   
D  100.0% (8/8)     IGHD7-27*01  4    ----------------------------------------------------------------------------------........  11

                                      -------------->                                  
                                       W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2905   268  TGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  316
J  100.0% (49/49)   IGHJ2*01     5    .................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_173624

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD1-26*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGG	TAGTGGG	CAATACAGTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCT	ARGGSGQYSAYFGS	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  I  S  D
                    Query_2906   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCATCTGGATACAGCTTTATCAGTGA  90
V  93.1% (269/289)  IGHV5-51*01  6    .............................A....................A..............GT................C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  G  K  G  L  D  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  S  P
                    Query_2906   91   CTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGACTGGATGGGGGTCATTTATCCTGGTGACTCTGAAACCAGATATAGTCC  180
V  93.1% (269/289)  IGHV5-51*01  96   .......................T..................G.........A....C.................T........C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  T  S  L  K  A  S  D  T  A
                    Query_2906   181  GTCCTTCCAAGGCCAGGTCACCATTTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGACCAGCCTGAAGGCCTCGGACACCGC  270
V  93.1% (269/289)  IGHV5-51*01  186  ........................C...................G....................G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  F  C  A  R  G  G  S  G  Q  Y  S  A  Y  F  G  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2906   271  CATATACTTCTGTGCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.1% (269/289)  IGHV5-51*01  276  ...G..T.A..........----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD1-26*01  5    ------------------------.......----------------------------------------------------------  11
J  93.6% (44/47)    IGHJ4*02     2    ------------------------------------------........A..AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_173625

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD3-10*01                                                                                           27.6    8e-04 
IGHJ5*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TTTT	TATGGTTCGGGGAG	GG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTTTTTATGGTTCGGGGAGGGACTGGTTCGACCCC	ASFYGSGRDWFDP	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	70	4	0	94.6
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	294	5	5	0	0	100
Total	N/A	N/A	292	271	21	0	92.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  L  
                    Query_2907   3    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGCTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCTTGTAAGGGTTCTGGATACAGCTTTCTCA  92
V  92.8% (271/292)  IGHV5-51*01  2    ....G.....G..................G...............................C........................AC..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  D  W  I  A  W  V  R  Q  P  P  G  K  G  L  E  W  M  G  I  I  Y  P  Y  D  S  S  T  R  Y  
                    Query_2907   93   ACGACTGGATCGCCTGGGTGCGCCAGCCGCCCGGGAAAGGCCTGGAGTGGATGGGCATCATCTATCCTTATGACTCTAGTACCAGATACA  182
V  92.8% (271/292)  IGHV5-51*01  92   G.T.........G.............AT...........................G............GG.......GA...........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  T  S  I  I  T  A  Y  L  E  W  S  S  L  K  A  S  D  
                    Query_2907   183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGATACGTCCATCATCACCGCCTACCTGGAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  92.8% (271/292)  IGHV5-51*01  182  .....................................C.A........G.............C...........................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  A  M  Y  Y  C  A  S  F  Y  G  S  G  R  D  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2907   273  CCGCTATGTATTACTGTGCGAGTTTTTATGGTTCGGGGAGGGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTGTCCTCAG  362
V  92.8% (271/292)  IGHV5-51*01  272  ....C.................--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (14/14)   IGHD3-10*01  8    --------------------------..............--------------------------------------------------  21
J  97.9% (47/48)    IGHJ5*02     4    ------------------------------------------........................................C.......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_173622

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            382     4e-108
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2908   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_2908   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  98.8% (247/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_2908   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  98.8% (247/250)  IGHV3-7*01   227  ..........................................................C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2908   271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_173620

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           417     6e-119
IGHD1-20*01                                                                                           29.5    2e-04 
IGHJ3*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-20*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGAAAA	TATAACTGGAACGAC	GGAAT	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATC	ARVGKYNWNDGIAFDI	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	72	3	0	96
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	109	5	0	95.6
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	295	281	14	0	95.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N 
                    Query_2909   4    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAAC  93
V  95.3% (281/295)  IGHV1-69*01  1    ...G...................G.......................C........................................G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  F  A  V  N  W  V  R  Q  A  P  G  H  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  K  Y 
                    Query_2909   94   AGCTTTGCTGTCAACTGGGTGCGACAGGCCCCTGGACATGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAACAAAATAC  183
V  95.3% (281/295)  IGHV1-69*01  91   ....A....A...G........................A..........................................G....C...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  V  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_2909   184  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGGACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGAC  273
V  95.3% (281/295)  IGHV1-69*01  181  ..................................................C....C..................................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  V  G  K  Y  N  W  N  D  G  I  A  F  D  I  W  D  Q  G  T  I  V  T 
                    Query_2909   274  ACGGCCGTTTATTATTGTGCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATCTGGGACCAAGGGACAATAGTCACC  363
V  95.3% (281/295)  IGHV1-69*01  271  ........G.....C..........-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (15/15)   IGHD1-20*01  3    ---------------------------------...............------------------------------------------  17
J  93.6% (44/47)    IGHJ3*02     4    -----------------------------------------------------...T.............G............G......  40

                                                
                                       V  S  S  
                    Query_2909   364  GTCTCTTCAG  373
J  93.6% (44/47)    IGHJ3*02     41   ..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_25771

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TG	ACGATTTTTGGAGTGG	CCCCGTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACGATTTTTGGAGTGGCCCCGTCCTACTTTGACTCC	ARVTIFGVAPSYFDS	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  H  T  R  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_2910   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCACACTCGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*01  49   ....................................AT..G.A..........................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2910   91   TGGATTGGGTATATCCATTACAGTGGGAGCACCAATTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAT  180
V  95.9% (234/244)  IGHV4-59*01  139  ...............T...................C.....C...............................................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  T  I  F  G  V  A  P  S 
                    Query_2910   181  CAGTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTGACGATTTTTGGAGTGGCCCCGTCC  270
V  95.9% (234/244)  IGHV4-59*01  229  ...............C................................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (16/16)   IGHD3-3*01   6    ------------------------------------------------------------------................--------  21
J  95.7% (45/47)    IGHJ4*02     2    -----------------------------------------------------------------------------------------.  2

                                      ----------->                                  
                                       Y  F  D  S  W  A  Q  G  T  L  V  T  V  S  S  
                    Query_2910   271  TACTTTGACTCCTGGGCCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.7% (45/47)    IGHJ4*02     3    ..........A.....G.............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_25773

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD3-22*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATG	GTATTATTCTGATAACAGTGGTTATT	T	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATGGTATTATTCTGATAACAGTGGTTATTTCTTTGACTCC	AREWYYSDNSGYFFDS	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_2911   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGCCAGTCCCCAGGGAAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ...........................................G.....................G...C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  V  Y  Y  T  G  F  T  D  Y  N  P  S  L  K  S  R  I  T  I  S  L  D  T  S  K  N 
                    Query_2911   91   TGGCTTGGGTTTGTCTACTACACTGGATTCACCGACTACAACCCCTCCCTCAAGAGTCGAATCACCATATCACTAGACACGTCCAAGAAC  180
V  93.1% (228/245)  IGHV4-59*01  139  ...A......A.A....T....G...GAG....A..........................G...........G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  W  Y  Y  S  D  N  S  G 
                    Query_2911   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGAATGGTATTATTCTGATAACAGTGGT  270
V  93.1% (228/245)  IGHV4-59*01  229  .............A.................................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (22/26)    IGHD3-22*01  1    --------------------------------------------------------------------......C.A.....GT......  22

                                      -------------->                                  
                                       Y  F  F  D  S  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_2911   271  TATTTCTTTGACTCCTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  319
D  84.6% (22/26)    IGHD3-22*01  23   ....---------------------------------------------  26
J  95.5% (42/44)    IGHJ4*02     5    -----........A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_25772

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     1e-109
IGHD6-25*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTC	ARQSSAGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	269	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  R  S  S  G  Y  D  F  L  D  Y
                    Query_2912   1    GCAGCTGGTGCAGTCTGGAGCAGAGCTAAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGAGTTCTGGGTACGACTTTCTCGACTA  90
V  92.4% (269/291)  IGHV5-51*01  6    .........................G.G..A.....C.........................A.G.......A...AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_2912   91   CTGGATCGTCTGGGTGCGCCAAATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGTCC  180
V  92.4% (269/291)  IGHV5-51*01  96   ........G............G..........................................................G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  A
                    Query_2912   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGCGCAGTCTGAAGGCCTCGGACACCGC  270
V  92.4% (269/291)  IGHV5-51*01  186  .............................C...............C..................A....C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_2912   271  CAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  360
V  92.4% (269/291)  IGHV5-51*01  276  ..T..................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  100.0% (48/48)   IGHJ6*02     15   -------------------------------------------...............................................  61

                                       
                                       
                    Query_2912   361  A  361
J  100.0% (48/48)   IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_25774

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           336     1e-94
IGHD3-10*01                                                                                           39.1    3e-07
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	G	ACTATGGAACGGGGAGTTATTATAAC	AAGACCC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACTATGGAACGGGGAGTTATTATAACAAGACCCATGGACGTC	AKTMERGVIITRPMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  S  F  S  H  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2913   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCAGCTTCAGTCACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-30*18  47   ........................C...........C.......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  A  Y  D  E  S  F  K  S  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2913   91   AGTGGGTGGCAGTTATAGCATATGATGAAAGTTTTAAATCTTACGCAGCCTCCGTGAAGGGCCGATTTACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-30*18  137  .................T.........G....AA.....AC..T....A..................C......................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  K  T  M  E  R  G  V  I  
                    Query_2913   181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGATGAGGACACGGCTGTGTATTATTGTGCGAAGACTATGGAACGGGGAGTTATTA  270
V  93.5% (231/247)  IGHV3-30*18  227  ...A................................C.....................C........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.3% (24/26)    IGHD3-10*01  6    --------------------------------------------------------------------.......TT.............  27

                                      T------------------>                                 
                                      I  T  R  P  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2913   271  TAACAAGACCCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  323
D  92.3% (24/26)    IGHD3-10*01  28   ....-------------------------------------------------  31
J  97.6% (41/42)    IGHJ6*02     21   -----------......................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_25777

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           305     3e-85
IGHD3-3*01                                                                                            31.5    6e-05
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGGCCCCGGATCCGAT	TTACGATTTTTGGACTGGT	GATATCAAGGCCGCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGGCCCCGGATCCGATTTACGATTTTTGGACTGGTGATATCAAGGCCGCTTACTTTGGCCTC	ARAPDPIYDFWTGDIKAAYFGL	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	220	25	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  R  D  S  T  M  N  W  V  R  Q  A  P  G  T  G  L  
                    Query_2914   1    GGTCCCTGAGACTCTCCTGTGCTGCCTCTGGATTCAACTTTAGAGACTCTACTATGAACTGGGTCCGCCAGGCTCCAGGGACGGGGCTGG  90
V  89.8% (220/245)  IGHV3-23*01  47   ......................A.............C......CAG..A.G.C....G.......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  N  G  R  K  T  Y  S  A  V  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2914   91   AGTGGGTCTCAGGTATCAGTGGTAATGGTCGTAAAACATACTCCGCAGTCTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  89.8% (220/245)  IGHV3-23*01  137  ............C...T.......G....G...GC.......A.....A.........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  S  L  Q  M  N  S  L  R  H  E  D  T  A  V  Y  F  C  A  R  A  P  D  P  I  Y  D  
                    Query_2914   181  AGAACACTCTGTCTCTTCAAATGAACAGCCTGAGACACGAGGACACGGCCGTTTATTTCTGTGCGCGGGCCCCGGATCCGATTTACGATT  270
V  89.8% (220/245)  IGHV3-23*01  227  .......G....A...G..................GC...............A....A.......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.7% (18/19)    IGHD3-3*01   4    ----------------------------------------------------------------------------------........  11

                                      -CDR3-IMGT--------------------------->                                  
                                      F  W  T  G  D  I  K  A  A  Y  F  G  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2914   271  TTTGGACTGGTGATATCAAGGCCGCTTACTTTGGCCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
D  94.7% (18/19)    IGHD3-3*01   12   ......G....-------------------------------------------------------------  22
J  93.5% (43/46)    IGHJ4*02     3    --------------------------.......A.TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_25776

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD3-3*01                                                                                            33.4    2e-05 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGGGGGGCCTT	CGATTTTTGGAGTGGTT	TCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGGGGGGCCTTCGATTTTTGGAGTGGTTTCCACTTTGACTCC	ARLGGAFDFWSGFHFDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  T  S  G  Y  S  F  T  T  H
                    Query_2915   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGCTTTACCACCCA  90
V  94.5% (274/290)  IGHV5-51*01  6    .............................A..................................GG....................G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  M  G  I  I  Y  P  G  V  S  D  T  R  Y  R  P
                    Query_2915   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACATGGGGATCATCTATCCTGGTGTCTCTGATACCAGATACAGACC  180
V  94.5% (274/290)  IGHV5-51*01  96   ........G...................................GG......................A..................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  A
                    Query_2915   181  GTCCTTCCAAGGCCAAGTCACCATCTCAGCCGACAAGTCCGTCAGTACCGCCTACCTGCAGTGGAGGAGCTTGAAGGCCTCGGACACCGC  270
V  94.5% (274/290)  IGHV5-51*01  186  ...............G........................A....C....................C...C...................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  L  G  G  A  F  D  F  W  S  G  F  H  F  D  S  W  G  Q  G  T  L  V  T  V
                    Query_2915   271  CATGTATTATTGTGCGAGACTAGGGGGGGCCTTCGATTTTTGGAGTGGTTTCCACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGT  360
V  94.5% (274/290)  IGHV5-51*01  276  .........C..........----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD3-3*01   7    ---------------------------------.................----------------------------------------  23
J  97.8% (44/45)    IGHJ4*02     4    -----------------------------------------------------.........A...........................  40

                                              
                                        S  S  
                    Query_2915   361  CTCCTCAG  368
J  97.8% (44/45)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_178902

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           383     1e-108
IGHD2-8*01                                                                                            29.5    2e-04 
IGHJ5*01                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD2-8*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCACG	CAGTACCGATGCTCT	AGGATATTGTACTAA	G	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGCAGTACCGATGCTCTAGGATATTGTACTAAGAACTGGTTTGATTCC	ARSTDALGYCTKNWFDS	263	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	49	2	0	96.1
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	107	7	0	93.9
CDR3-IMGT (germline)	263	267	5	5	0	0	100
Total	N/A	N/A	267	256	11	0	95.9


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  T  T  S  G  M  C  V  N  W  I  R
                    Query_2916   1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCACCACTAGCGGAATGTGTGTGAACTGGATCCG  90
V  95.9% (256/267)  IGHV2-70*01  30   ...........................................................G......T.............G.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  V  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  A  R  L  S
                    Query_2916   91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCAGTCATTGATTGGGATGATGATAAATACTACAGCACATCTCTGAAGGCCAGGCTCAG  180
V  95.9% (256/267)  IGHV2-70*01  120  ..................................C............................................A.........C  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  R  D  T  S  K  N  Q  V  V  L  T  M  T  N  V  D  P  V  D  T  A  T  Y  Y  C  A  R  S
                    Query_2916   181  CATCTCCAGGGACACCTCCAAAAATCAGGTGGTCCTTACCATGACCAACGTGGACCCTGTGGACACAGCCACTTATTACTGTGCACGCAG  270
V  95.9% (256/267)  IGHV2-70*01  210  ........A...............C..............A.........A......................G..............---  296
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                      -------------CDR3-IMGT-------------------->                                  
                                        T  D  A  L  G  Y  C  T  K  N  W  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2916   271  TACCGATGCTCTAGGATATTGTACTAAGAACTGGTTTGATTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  347
D  100.0% (15/15)   IGHD2-8*01   1    ------------...............--------------------------------------------------  15
J  93.9% (46/49)    IGHJ5*01     3    ----------------------------........C..C...........A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_81839

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           294     6e-82
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACG	TACGGTGAC	CCTACACTCCCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACGTACGGTGACCCTACACTCCCATACTTTGACTCT	ARTYGDPTLPYFDS	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  M  S  S  G  G  Y  L  W  S  W  I  R  Q  N  P  G  K  G 
                    Query_2917   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCTATGAGCAGTGGCGGCTATCTCTGGAGCTGGATCCGCCAAAACCCAGGGAAGGGC  90
V  87.9% (218/248)  IGHV4-31*03  49   ...............................G...C..C........T..T..CTA..................GC..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  T  S  Y  Y  S  P  S  L  K  R  R  L  T  I  S  V  G  T  S 
                    Query_2917   91   CTGGAGTGGATTGGGAGCATCTATTACAGTGGAACCTCCTACTACAGCCCGTCCCTCAAGAGGCGACTTACAATATCAGTAGGCACCTCT  180
V  87.9% (218/248)  IGHV4-31*03  139  ...............TA...............G.G.A.........A...............T...G....C..........A...G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       E  K  H  F  S  L  K  L  T  S  M  T  A  A  D  T  A  I  Y  F  C  A  R  T  Y  G  D  P  T  L 
                    Query_2917   181  GAGAAGCACTTCTCCCTGAAGCTGACCTCTATGACTGCCGCGGACACGGCCATATATTTTTGTGCGAGGACGTACGGTGACCCTACACTC  270
V  87.9% (218/248)  IGHV4-31*03  229  A....C..G................G....G....................G.G....AC........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (9/9)     IGHD4-17*01  5    ------------------------------------------------------------------------.........---------  13

                                      -------------->                                  
                                       P  Y  F  D  S  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_2917   271  CCATACTTTGACTCTTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  319
J  93.5% (43/46)    IGHJ4*02     3    ---..........AC.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_178900

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           424     8e-121
IGHD2-21*01                                                                                           14.1    9.2   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGCATACA	ATTGTGG	ACCGGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCATACAATTGTGGACCGGGGACTAC	ARGGIQLWTGDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	280	9	0	96.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y 
                    Query_2918   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTAT  91
V  96.9% (280/289)  IGHV1-18*01  7    .....................................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  L  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  V  S  T  Y  I  G  N  T  N  Y  A  Q 
                    Query_2918   92   GGTCTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGGTCAGCACTTACATTGGTAACACAAACTATGCACAG  181
V  96.9% (280/289)  IGHV1-18*01  97   ...A..................................................A.....G......A......................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  L  E  L  K  S  L  R  S  D  D  T  A 
                    Query_2918   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACTTGGAGCTGAAGAGCCTGAGATCTGACGACACGGCC  271
V  96.9% (280/289)  IGHV1-18*01  187  ...C..................................................A.........G.........................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  G  G  I  Q  L  W  T  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2918   272  GTCTATTACTGTGCGAGAGGGGGCATACAATTGTGGACCGGGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.9% (280/289)  IGHV1-18*01  277  ..G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (7/7)     IGHD2-21*01  6    -----------------------------.......----------------------------------------------  12
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_178901

Length=253
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           276     2e-76
IGHJ4*01                                                                                              31.5    8e-05


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCCTG	N/A	N/A	N/A	GTCAC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	212	84	79	5	0	94
Total	N/A	N/A	212	194	18	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2919   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTTCGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.5% (194/212)  IGHV3-23*01  47   .............................................G..AT........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------FR3-IM
                                      E  W  V  S  T  I  T  E  T  G  R  N  S  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  
                    Query_2919   91   AGTGGGTCTCAACTATTACTGAGACTGGTCGTAATTCATACTACGCAGACTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCA  180
V  91.5% (194/212)  IGHV3-23*01  137  ...........G......G..GT.G....G...GCA............................G....C...............T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      GT--------------------------------------------->
                                      K  N  T  L  Y  L  Q  M  N  T  L  V  T  V  S  S  
                    Query_2919   181  AGAACACACTGTATCTGCAAATGAACACCCTGGTCACCGTCTCCTCAG  228
V  91.5% (194/212)  IGHV3-23*01  227  .......G...................G....----------------  258
                                      K  N  T  L  Y  L  Q  M  N  S  L                 
J  100.0% (16/16)   IGHJ4*01     33   --------------------------------................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 23863566


Query= Query_178907

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           332     4e-93
IGHD3-22*01                                                                                           21.8    0.043
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TGCCCGCGACGATGAAAAGTATTACTCCTT	TAGTAGTGGTT	TTTCACCATTTAGCT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGCCCGCGACGATGAAAAGTATTACTCCTTTAGTAGTGGTTTTTCACCATTTAGCTCC	ASARDDEKYYSFSSGFSPFSS	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  F  W  N  W  I  R  Q  R  P  G  K  G 
                    Query_2920   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTGGTGATTACTTCTGGAACTGGATCCGCCAACGCCCAGGGAAGGGC  90
V  92.7% (230/248)  IGHV4-31*03  49   .........................................C.......G.....A.....G............G.A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  Y  M  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  T 
                    Query_2920   91   CTGGAGTGGATTGCGTATATGTATTACAGTGGGAGCACCTACTACAATCCGTCCCTGAAGAGTCGAGTTACCATCTCAATAGACACGACT  180
V  92.7% (230/248)  IGHV4-31*03  139  .............G...C..C..........................C........C.................A...G........T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  H  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  A  R  D  D  E  K  Y 
                    Query_2920   181  AAGAACCACTTCTCCCTGAGGCTGAACTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGTGCCCGCGACGATGAAAAGTAT  270
V  92.7% (230/248)  IGHV4-31*03  229  ........G..........A.....G...........................G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      CDR3-IMGT-------------------------->                                  
                                       Y  S  F  S  S  G  F  S  P  F  S  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2920   271  TACTCCTTTAGTAGTGGTTTTTCACCATTTAGCTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  100.0% (11/11)   IGHD3-22*01  13   --------...........---------------------------------------------------  23
J  100.0% (36/36)   IGHJ5*02     16   ----------------------------------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_178904

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD1-1*01                                                                                            14.1    7.9  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_2921   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_2921   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_2921   181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_2921   271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_22207

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           322     2e-90
IGHD3-10*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCTCGTTTATG	ATGGTTCGGGGA	TTCCTCCCGAAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTCGTTTATGATGGTTCGGGGATTCCTCCCGAAGGACTAC	ARLSFMMVRGFLPKDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  S  G  G  S  V  N  S  G  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_2922   4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCGTCAACAGTGGTGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  91.5% (227/248)  IGHV4-61*08  50   .....TCC...A....CA.....................G...........A......................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  T  G  G  A  N  Y  N  P  S  L  K  S  R  V  S  I  S  I  D  T  S  
                    Query_2922   94   TCGAGTGGATTGGATATATCTATTACACTGGGGGCGCCAACTACAATCCCTCCCTCAAGAGTCGAGTCAGCATATCAATAGACACGTCCG  183
V  91.5% (227/248)  IGHV4-61*08  140  .G...........G.............G....A..A..........C......................C.......G...........A  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      E  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  S  F  M  M  V  R  
                    Query_2922   184  AGAATCAGTTCTCCCTGAAGCTGAGTTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGCGAGACTCTCGTTTATGATGGTTCGGG  273
V  91.5% (227/248)  IGHV4-61*08  230  ....C....................C..........................G..T............----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD3-10*01  9    --------------------------------------------------------------------------------..........  18

                                      T------------------>                                  
                                      G  F  L  P  K  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2922   274  GATTCCTCCCGAAGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (12/12)   IGHD3-10*01  19   ..----------------------------------------------------  20
J  100.0% (40/40)   IGHJ4*02     9    --------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_81830

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           402     3e-114
IGHD2-15*01                                                                                           10.3    135   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CGAGAAG	GGTGG	CGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGACACGAGAAGGGTGGCGGGGCGAACGACTAC	VRHEKGGGANDY	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	73	1	0	98.6
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	297	8	6	2	0	75
Total	N/A	N/A	295	276	19	0	93.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P  
                    Query_2923   3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCCA  92
V  93.6% (276/295)  IGHV5-51*01  2    ........................................C........................................GC...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  A  D  S  D  T  R  Y  
                    Query_2923   93   ATTACTGGATCGGCTGGGTGCGCCAGATGCCTGGGAAAGGCCTGGAGTGGATGGGGAACATCTATCCTGCTGACTCTGACACCAGATACA  182
V  93.6% (276/295)  IGHV5-51*01  92   GC.............................C.........................T...........G.........T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  L  T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_2923   183  GTCTGACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACA  272
V  93.6% (276/295)  IGHV5-51*01  182  .C.C.T.....C.............................................................C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                
                                      T  A  V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2923   273  CCGCCGTGTATTATTGTGTCAGACACGAGAAGGGTGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  357
V  93.6% (276/295)  IGHV5-51*01  272  .....A.......C....CG.....------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                               
D  100.0% (5/5)     IGHD2-15*01  14   --------------------------------.....------------------------------------------------  18
J  97.4% (37/38)    IGHJ4*02     9    -----------------------------------------------....................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_22209

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           321     7e-90
IGHD3-3*01                                                                                            18.0    0.61 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CGGGGCCTGCCACATATGAGTCTGATGGAAGTGCTA	ATTACGATT	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCGGGGCCTGCCACATATGAGTCTGATGGAAGTGCTAATTACGATTCTGACTAC	AKAGPATYESDGSANYDSDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	25	4	0	86.2
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  F  T  F  R  S  Y  A  L  T  W  V  R  Q  P  P  G  K  G  L  
                    Query_2924   1    GGTCCCTGAGACTCTCCTGTGAAGGCAGTGGATTCACCTTTAGAAGCTATGCCTTGACCTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  91.2% (227/249)  IGHV3-23*01  47   .....................C..C.TC...............C.........A...G.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  G  G  S  G  N  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2924   91   AGTGGGTCTCAAGTATTGGTGGTAGTGGCAATAATACATACTATGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAATTCCA  180
V  91.2% (227/249)  IGHV3-23*01  137  ...........GC....A..........TGG..GC........C....................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  H  L  Q  M  N  N  L  R  V  E  D  T  A  V  Y  Y  C  A  K  A  G  P  A  T  Y  E  
                    Query_2924   181  AGAACACGCTGCATCTCCAAATGAACAACCTGAGAGTCGAGGACACGGCCGTATATTACTGTGCGAAAGCGGGGCCTGCCACATATGAGT  270
V  91.2% (227/249)  IGHV3-23*01  227  ...........T....G..........G........C................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      R3-IMGT------------------------>                                  
                                      S  D  G  S  A  N  Y  D  S  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_2924   271  CTGATGGAAGTGCTAATTACGATTCTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  336
D  100.0% (9/9)     IGHD3-3*01   3    ---------------.........------------------------------------------  11
J  97.6% (40/41)    IGHJ4*02     8    -------------------------...................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_81832

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           297     7e-83
IGHD5-18*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	CTTAC	GTGGATTCGCCTATGGTT	CAC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGGACTTACGTGGATTCGCCTATGGTTCACTTGAGTTC	AKDLRGFAYGSLEF	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	10	1	0	90.9
CDR1-IMGT	27	50	24	23	1	0	95.8
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	125	24	18	6	0	75
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	232	211	21	0	90.9


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  V  E  W  V  S  L  L  
                    Query_2925   16   GTGCAGTCTCTGGATTCACCTTTGATGATTACACCATGCACTGGGTCCGTCAAGCTCCGGGCAAGGGTGTGGAATGGGTCTCTCTTCTTA  105
V  90.9% (211/232)  IGHV3-43*01  65   ......C........................T.............................G......C....G............A...  154
                                         A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  L  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      T  W  D  G  T  R  T  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  K  K  S  L  F  L  
                    Query_2925   106  CTTGGGATGGGACTAGAACATACTATGCGGACTCTGTGAAGGGCCGATTCATCATCTCCAGAGACAAGAGCAAAAAATCACTGTTTCTGC  195
V  90.9% (211/232)  IGHV3-43*01  155  G.........TGG...C...........A......................C...............C........C..C....A.....  244
                                      S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      Q  M  N  S  L  R  P  E  D  S  A  L  Y  Y  C  A  K  D  L  R  G  F  A  Y  G  S  L  E  F  W  
                    Query_2925   196  AAATGAACAGTCTGAGACCTGAGGACAGCGCCTTATATTACTGTGCAAAGGACTTACGTGGATTCGCCTATGGTTCACTTGAGTTCTGGG  285
V  90.9% (211/232)  IGHV3-43*01  245  .................A.........C......G..............A..--------------------------------------  296
                                      Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A  K                                         
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------......A.AG........---------------  18
J  95.2% (40/42)    IGHJ4*02     7    ------------------------------------------------------------------------------....C.A.....  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_2925   286  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  95.2% (40/42)    IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_178909

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           336     1e-94
IGHD3-3*01                                                                                            14.1    8.5  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	CTG	TTTTTGG	CGCAGCGAATGATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCTGTTTTTGGCGCAGCGAATGATAATTACGGTGTGGACGTC	ARAVFGAANDNYGVDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2926   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGGTATTGGATACACTGGGTCCGTCAAGCTCCAGGGAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-74*01  47   ..............................................C..C.....G...........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  H  I  N  M  D  G  S  S  T  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2926   91   ATTGGGTCTCACATATTAACATGGATGGGAGTAGCACAGCCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.2% (232/249)  IGHV3-74*01  137  TG..........G......T.GT...............AG..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  V  F  G  A  A  N  
                    Query_2926   181  AGAATACCCTGTATCTACAATTGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGAGCTGTTTTTGGCGCAGCGAATG  270
V  93.2% (232/249)  IGHV3-74*01  227  ....C..G........G...A...............................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-3*01   10   ------------------------------------------------------------------------.......-----------  16

                                      T------------------>                                 
                                      D  N  Y  G  V  D  V  W  G  Q  G  A  T  V  T  I  S  S 
                    Query_2926   271  ATAATTACGGTGTGGACGTCTGGGGCCAAGGGGCCACGGTCACCATCTCCTCA  323
J  93.8% (45/48)    IGHJ6*02     15   -----......A....................A...........G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_81834

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           322     2e-90
IGHD5-12*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGGAGA	AGTGGCTAC	AAGACTTAGGGGGCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGAGAAGTGGCTACAAGACTTAGGGGGCCCTTTTGACTAC	ARREKWLQDLGGPFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  L  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_2927   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCCTCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCCGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-39*01  49   ...............................G....A...........................................A........G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  L  I  G  N  F  Y  Y  G  G  S  T  Y  Y  N  P  S  L  K  G  R  A  A  I  S  V  D  T  S 
                    Query_2927   91   CTGGAGTTGATTGGAAATTTCTATTATGGTGGGAGCACCTACTATAACCCGTCCCTCAAGGGTCGAGCCGCCATTTCCGTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-39*01  139  .......G......G.G.A........A................C...............A......T.A....A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  V  T  S  V  T  A  A  D  R  A  V  Y  R  C  A  R  R  E  K  W  L  Q  D 
                    Query_2927   181  AAGAACCAATTCTCCCTGAAGGTGACCTCTGTGACCGCCGCAGACAGGGCTGTATATCGCTGTGCGAGACGGGAGAAGTGGCTACAAGAC  270
V  91.2% (228/250)  IGHV4-39*01  229  ........G............C...G....................C......G...TA...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD5-12*01  9    ----------------------------------------------------------------------------.........-----  17

                                      GT------------------>                                  
                                       L  G  G  P  F  D  Y  W  G  Q  G  I  L  V  T  I  S  S  
                    Query_2927   271  TTAGGGGGCCCTTTTGACTACTGGGGCCAGGGAATCCTGGTCACCATCTCCTCAG  325
J  95.3% (41/43)    IGHJ4*02     6    ------------......................C..........G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_81835

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           363     2e-102
IGHD1-7*01                                                                                            16.1    2.5   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ACTGGAAATAC	ATAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTC	ARDRTGNTYYGLDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	16	8	0	66.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	261	29	0	90


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  N  D 
                    Query_2928   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTATACTTTCAGTAATGAT  91
V  90.0% (261/290)  IGHV1-18*01  7    ...............................A.................................T........C..C..T.CC.GCT..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  S  F  N  G  N  T  I  Y  A  Q 
                    Query_2928   92   GGTATTAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATTAGCTCTTTCAATGGAAACACAATCTACGCACAG  181
V  90.0% (261/290)  IGHV1-18*01  97   .....C............................................A.....C...G...A......T.......A...T......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  M  T  T  E  T  S  T  T  T  A  Y  M  E  L  R  S  L  T  Y  D  D  T  A 
                    Query_2928   182  AATTTACAGGGCAGAGTTACCATGACCACAGAAACTTCTACGACCACAGCCTACATGGAGCTGAGGAGCCTGACATATGACGACACGGCC  271
V  90.0% (261/290)  IGHV1-18*01  187  ..GC.C...........C..............C..A..C....G.............................G..C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                 
                                       V  Y  F  C  A  R  D  R  T  G  N  T  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2928   272  GTGTATTTCTGTGCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  358
V  90.0% (261/290)  IGHV1-18*01  277  .......A............-------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                      
D  90.9% (10/11)    IGHD1-7*01   7    ------------------------.......C...----------------------------------------------------  17
J  95.8% (46/48)    IGHJ6*02     15   ---------------------------------------......A....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_81837

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	247	223	21	3	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_2929   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  87
V  90.3% (223/247)  IGHV4-4*02   49   ..................GC.........T...TCC......A..AG........GG.......................G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  K 
                    Query_2929   88   GAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCAAG  177
V  90.3% (223/247)  IGHV4-4*02   139  .......................T......A................................G.......A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G  W 
                    Query_2929   178  AATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGTGGGTAGCAGTGGCTGG  267
V  90.3% (223/247)  IGHV4-4*02   229  ..CC.GT..........G....GC..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-19*01  6    -----------------------------------------------------------------------------.............  18

                                      -------->                                
                                       L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_2929   268  CTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  308
J  95.0% (38/40)    IGHJ4*02     7    -......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_73538

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           410     1e-116
IGHJ3*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	CGGATCGGTCCCCACTTCAC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGATCGGTCCCCACTTCACTGATGCTTTTGATATG	ARRIGPHFTDAFDM	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	69	2	0	97.2
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	111	3	0	97.4
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  M  G  S  G  Y  I  F  T  N  
                    Query_2930   5    TGCAGCTGGTGCAGTCTGGGGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTATGGGTTCTGGATACATTTTTACCAATT  94
V  95.2% (276/290)  IGHV5-51*03  5    ...................A...........................................A..............GC.......GC.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  I  V  Y  P  D  D  S  D  I  R  Y  K  
                    Query_2930   95   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATAGGGATCGTCTATCCTGATGACTCTGATATTAGATACAAAC  184
V  95.2% (276/290)  IGHV5-51*03  95   .................................................G......A.........G...........CC.......GC.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  T  S  L  K  A  S  D  T  
                    Query_2930   185  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGACCAGCCTGAAGGCCTCGGACACCG  274
V  95.2% (276/290)  IGHV5-51*03  185  ..................................................................G.......................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                  
                                      A  M  Y  Y  C  A  R  R  I  G  P  H  F  T  D  A  F  D  M  W  D  Q  G  T  K  L  T  V  S  S  
                    Query_2930   275  CCATGTATTACTGTGCGAGACGGATCGGTCCCCACTTCACTGATGCTTTTGATATGTGGGACCAAGGGACAAAGCTCACCGTCTCTTCAG  364
V  95.2% (276/290)  IGHV5-51*03  275  ....................----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
J  92.0% (46/50)    IGHJ3*02     1    ----------------------------------------...............C....G...........T.G...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_37778

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           344     6e-97
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGTCCCTC	ACGGTGAC	CTAGATT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGACGTCCCTCACGGTGACCTAGATTCC	ARDVPHGDLDS	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  S  T  F  S  S  F  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2931   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATCCACCTTCAGCAGCTTCTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-74*01  47   .................................T.........T....A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  I  T  V  D  G  S  G  T  V  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2931   91   AGTGGGTCTCACGCATTACTGTTGATGGCAGTGGCACAGTCTATGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-74*01  137  T............T....A.AG......G...A.....AG...C..............................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  V  P  H  G  D  L  
                    Query_2931   181  AGAACACGTTGTATCTGCAAATGAACAGTCTGAGAGCCGACGACACGGCTGTGTATTACTGTGCAAGAGACGTCCCTCACGGTGACCTAG  270
V  94.0% (235/250)  IGHV3-74*01  227  ........C...............................G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD4-17*01  6    ------------------------------------------------------------------------------........----  13

                                      ---->                                 
                                      D  S  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_2931   271  ATTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  308
J  100.0% (35/35)   IGHJ5*02     16   ---...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_37779

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           380     1e-107
IGHD1-26*01                                                                                           14.1    9.3   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGG	TAGTGGG	CAATACAGTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCT	ARGGSGQYSAYFGS	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  G  S  L  R  I  S  C  K  A  S  G  Y  S  F  I  S  D
                    Query_2932   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGGGTCTCTGAGGATCTCCTGTAAGGCATCTGGATACAGCTTTATCAGTGA  90
V  92.0% (266/289)  IGHV5-51*01  6    .............................A...........A........A..............GT................C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  G  K  G  L  D  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  S  P
                    Query_2932   91   CTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGACTGGATGGGGGTCATTTATCCTGGTGACTCTGAAACCAGATATAGTCC  180
V  92.0% (266/289)  IGHV5-51*01  96   .......................T..................G.........A....C.................T........C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  T  G  L  K  A  S  D  P  A
                    Query_2932   181  GTCCTTCCAAGGCCAGGTCACCATTTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGACCGGCCTGAAGGCCTCGGACCCCGC  270
V  92.0% (266/289)  IGHV5-51*01  186  ........................C...................G....................G.A.................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                
                                        I  Y  F  C  A  R  G  G  S  G  Q  Y  S  A  Y  F  G  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2932   271  CATATACTTCTGTGCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  357
V  92.0% (266/289)  IGHV5-51*01  276  ...G..T.A..........--------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                     
D  100.0% (7/7)     IGHD1-26*01  5    ------------------------.......--------------------------------------------------------  11
J  93.3% (42/45)    IGHJ4*02     2    ------------------------------------------........A..AC................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_191894

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           442     2e-126
IGHD3-22*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              108     9e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCCGT	TGGTTAT	AATTCCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTC	ARAVGYNSDYYYGMDV	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	73	1	0	98.6
CDR1-IMGT	77	100	24	24	0	0	100
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	110	4	0	96.5
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	288	5	0	98.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_2933   3    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  92
V  98.3% (288/293)  IGHV5-51*01  2    ..G.......................................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_2933   93   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  182
V  98.3% (288/293)  IGHV5-51*01  92   ..........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  P  S  F  R  G  Q  V  T  I  S  A  D  K  A  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  
                    Query_2933   183  GACCGTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACAAGGCCATCAGCACCGCCTACCTGCAGTGGGGCAGCCTGAAGGCCTCGGACA  272
V  98.3% (288/293)  IGHV5-51*01  182  .C..........A............................T..........................A.....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      T  A  M  Y  Y  C  A  R  A  V  G  Y  N  S  D  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  
                    Query_2933   273  CCGCCATGTATTACTGTGCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCG  362
V  98.3% (288/293)  IGHV5-51*01  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD3-22*01  19   ----------------------------.......-------------------------------------------------------  25
J  100.0% (56/56)   IGHJ6*02     7    ------------------------------------------................................................  54

                                              
                                      V  S  S 
                    Query_2933   363  TCTCCTCA  370
J  100.0% (56/56)   IGHJ6*02     55   ........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_37772

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           360     1e-101
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AGCAG	AGCAGTGGCTGGTAC	GGGAAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAAGCAGAGCAGTGGCTGGTACGGGAAATTGACTAC	AKEAEQWLVREIDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2934   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGGCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-30*18  47   ............................................A......G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  T  S  Y  D  G  S  D  K  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2934   91   AGTGGGTGGCACTTACATCATATGATGGAAGTGATAAACACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCTAGAGACAATTCCA  180
V  96.0% (240/250)  IGHV3-30*18  137  ...........G...T................A.....T.....................................C.............  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  E  A  E  Q  W  L  V  
                    Query_2934   181  AGAACACGCTGTATCTGCAACTGAACAGCCTGAGACCTGAGGACACGGCTGTATATTACTGTGCGAAAGAAGCAGAGCAGTGGCTGGTAC  270
V  96.0% (240/250)  IGHV3-30*18  227  ....................A..............G................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD6-19*01  7    ---------------------------------------------------------------------------...............  21

                                      ------------->                                  
                                      R  E  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2934   271  GGGAAATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (42/42)   IGHJ4*02     7    ------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_73531

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            341     5e-96
IGHD6-13*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  G  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_2935   1    ACCCTGTCCCTCACCTGCGCAGTCTCTGGTGCCTCCATCAGCGGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  94.3% (232/246)  IGHV4-4*02   49   ....................T..........G..........A...............................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_2935   91   GAGTGGATTGGGAGTATCCATTATAGCGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAG  180
V  94.3% (232/246)  IGHV4-4*02   139  ............GAA...T..C....T.........A.....................................A.......A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  H  R  A  A  A  G 
                    Query_2935   181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATCCCCATAGAGCAGCAGCTGGC  270
V  94.3% (232/246)  IGHV4-4*02   229  ......................................G...........G...............------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (12/12)   IGHD6-13*01  7    -----------------------------------------------------------------------------............-  18

                                      ----------->                                  
                                       P  F  D  N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_2935   271  CCCTTTGACAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  316
J  93.2% (41/44)    IGHJ4*02     5    --.......T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_37770

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           319     2e-89
IGHD1-26*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGC	ATAGTGGGAGCTACT	TGT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGCATAGTGGGAGCTACTTGTACTTCTTTGACTAC	ARLHSGSYLYFFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  T  S  G  F  T  V  I  N  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2936   1    GGTCCCTGAGACTCTCCTGTTCGACCTCTGGATTCACCGTCATTAATAATTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.8% (224/244)  IGHV3-53*01  47   ....................G.AG.......G..........G..GC..C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  Y  T  N  G  R  T  F  Y  A  D  S  M  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_2936   91   AGTGGGTCTCAGCCATTTATACCAATGGTCGCACATTCTACGCAGACTCCATGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGA  180
V  91.8% (224/244)  IGHV3-53*01  137  ............TT.......G.GG....A......A.............G..........A............................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  E  M  N  S  L  R  A  A  D  T  A  V  Y  Y  C  A  R  L  H  S  G  S  Y  L  Y  
                    Query_2936   181  ACACGCTGTATCTTGAAATGAACAGCCTGAGAGCCGCGGACACGGCCGTGTATTATTGTGCGAGGCTGCATAGTGGGAGCTACTTGTACT  270
V  91.8% (224/244)  IGHV3-53*01  227  ..............C.....................A..................C........--------------------------  290
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  100.0% (15/15)   IGHD1-26*01  4    ---------------------------------------------------------------------...............------  18
J  93.8% (45/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      F  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_2936   271  TCTTTGACTACTGGGGCCAGGGGGCCCTGGTCACCGTCTCCTCAG  315
J  93.8% (45/48)    IGHJ4*02     4    A.....................AA.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_37771

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_2937   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_2937   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  93.1% (228/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_2937   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACGCGGCCGTGTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  93.1% (228/245)  IGHV4-59*01  229  ...................G...................A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2937   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_37776

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD2-15*01                                                                                           10.3    133   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CGAGAAG	GGTGG	CGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGACACGAGAAGGGTGGCGGGGCGAACGACTAC	VRHEKGGGANDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	6	2	0	75
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P  N  Y
                    Query_2938   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGAGAATCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCCAATTA  90
V  93.1% (271/291)  IGHV5-51*01  6    ....................................C..G..G..................................GC...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  A  D  S  D  T  R  Y  S  L
                    Query_2938   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAACATCTATCCTGCTGACTCTGACACCAGATACAGTCT  180
V  93.1% (271/291)  IGHV5-51*01  96   .....................................................T...........G.........T...........C.C  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2938   181  GACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACACCGC  270
V  93.1% (271/291)  IGHV5-51*01  186  .T.....C.............................................................C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_2938   271  CGTGTATTATTGTGTCAGACACGAGAAGGGTGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  351
V  93.1% (271/291)  IGHV5-51*01  276  .A.......C....CG.....------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                               
D  100.0% (5/5)     IGHD2-15*01  14   ----------------------------.....------------------------------------------------  18
J  97.4% (37/38)    IGHJ4*02     9    -------------------------------------------....................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_37777

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           361     5e-102
IGHD4-17*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GGTCATC	GACTACGGTGACTAC	GTCG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGAGGTCATCGACTACGGTGACTACGTCGACTTCTACTATTACGGAATGGACGTC	ATEVIDYGDYVDFYYYGMDV	290	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	63	7	0	90
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	175	30	24	6	0	80
FR3-IMGT	176	289	114	103	11	0	90.4
CDR3-IMGT (germline)	290	297	8	7	1	0	87.5
Total	N/A	N/A	297	264	33	0	88.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  K  P  G  E  S  L  R  V  S  C  A  A  S  G  L  S  F  K  N  A
                    Query_2939   1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGGTTAAGCCTGGAGAGTCCCTCAGAGTCTCCTGTGCAGCCTCTGGACTCAGCTTCAAAAACGC  90
V  88.9% (264/297)  IGHV3-15*01  6    ..........G.......G...........A........G.G......T...C....................T...CT....GT.....  95
                                        Q  L  V  E  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A

                                      ---><--------------------FR2-IMGT---------------------><----------CDR2-IMGT---------><----
                                        W  M  T  W  V  R  Q  S  P  G  K  G  L  E  W  V  G  R  I  R  S  R  N  D  G  G  T  A  D  Y
                    Query_2939   91   CTGGATGACCTGGGTCCGCCAGTCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGCATTAGAAGCAGAAACGATGGTGGGACGGCAGACTA  180
V  88.9% (264/297)  IGHV3-15*01  96   ........G.............G...............................T....A.....A..CT...........AA.......  185
                                        W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y

                                      ------------------------------------------------FR3-IMGT----------------------------------
                                        A  A  P  V  K  G  R  F  I  I  S  R  D  E  S  K  T  T  L  Y  L  Q  M  N  S  L  K  T  E  D
                    Query_2939   181  CGCTGCACCCGTGAAAGGCAGATTCATCATCTCAAGAGATGAATCGAAGACCACCCTTTATCTTCAAATGAACAGCCTGAAAACCGAGGA  270
V  88.9% (264/297)  IGHV3-15*01  186  ..........................C...............T..A..A.A...G..G.....G..........................  275
                                        A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D

                                      ------------------><-------------------------CDR3-IMGT------------------------>           
                                        P  A  V  Y  F  C  A  T  E  V  I  D  Y  G  D  Y  V  D  F  Y  Y  Y  G  M  D  V  W  G  Q  G
                    Query_2939   271  CCCAGCCGTCTATTTCTGTGCCACAGAGGTCATCGACTACGGTGACTACGTCGACTTCTACTATTACGGAATGGACGTCTGGGGCCAAGG  360
V  88.9% (264/297)  IGHV3-15*01  276  .A.......G....A....A.......---------------------------------------------------------------  302
                                        T  A  V  Y  Y  C  T  T                                                                  
D  100.0% (15/15)   IGHD4-17*01  2    ----------------------------------...............-----------------------------------------  16
J  88.1% (52/59)    IGHJ6*02     4    -----------------------------------------------------...A......C.....T....................  40

                                                            
                                        S  S  V  P  V  S  S 
                    Query_2939   361  GAGTTCGGTCCCCGTCTCCTCA  382
J  88.1% (52/59)    IGHJ6*02     41   ..CCA.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_73536

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           413     2e-117
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	CCGCCTTCCCTAGCGACCCCGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGCCTTCCCTAGCGACCCCGGGTACTTTGACTAC	ARAAFPSDPGYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  D  T  L  T  R  Y
                    Query_2940   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGAGACACCTTAACCAGGTA  90
V  95.5% (277/290)  IGHV1-46*01  6    ..................G......................................................T.......C.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  S  G  A  T  K  Y  A  Q
                    Query_2940   91   CTTTATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTAGTGGAGCCACAAAATACGCACA  180
V  95.5% (277/290)  IGHV1-46*01  96   ..A................................................................G....TAG.....GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  I  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_2940   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAATCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.5% (277/290)  IGHV1-46*01  186  .................................................G........................................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  A  A  F  P  S  D  P  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2940   271  CGTTTATTACTGTGCGAGAGCCGCCTTCCCTAGCGACCCCGGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  95.5% (277/290)  IGHV1-46*01  276  ...G................---------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                       
J  100.0% (46/46)   IGHJ4*02     3    -------------------------------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_37775

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           296     2e-82
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGCTT	GACCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCGC	ARGYGPLDR	240	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	216	27	0	88.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E  
                    Query_2941   4    CCCTGAGACTCTCCTGTACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAGT  93
V  88.9% (216/243)  IGHV4-59*01  50   .....TCC...A....C...........T..........GTAG..A..A......C............C.....GG..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N  
                    Query_2941   94   GGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAACC  183
V  88.9% (216/243)  IGHV4-59*01  140  ..A....G...A.....T..........C.....C.....................................T.................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------CDR3-IMGT-------->       
                                      Q  L  S  L  K  L  T  S  G  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  R  W  G  
                    Query_2941   184  AGCTCTCCCTGAAGCTGACCTCTGGGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCGCTGGGGCC  273
V  88.9% (216/243)  IGHV4-59*01  230  ..T...............G.....T..........................A...........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (7/7)     IGHD5-18*01  10   ---------------------------------------------------------------.......--------------------  16
J  97.5% (39/40)    IGHJ5*02     12   -----------------------------------------------------------------------------....C........  24

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_2941   274  AGGGAACCCTGGTCACCGTCTCCTCAG  300
J  97.5% (39/40)    IGHJ5*02     25   ...........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_151722

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           403     1e-114
IGHD3-16*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATGTCACC	TGGGGG	TATTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATGTCACCTGGGGGTATTCTGACTAC	ARYVTWGYSDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	273	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y 
                    Query_2942   2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTAT  91
V  94.8% (273/288)  IGHV1-18*01  7    ...................C.................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  T  Y  N  H  N  T  H  F  A  Q 
                    Query_2942   92   GCCATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACTTACAATCATAACACACACTTTGCACAG  181
V  94.8% (273/288)  IGHV1-18*01  97   .GT....G..................................................G.G........GG.......A...A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_2942   182  AAACTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGTACCGCCTACATGGAACTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (273/288)  IGHV1-18*01  187  ..G.........................................C..A...........G..............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  Y  V  T  W  G  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2942   272  GTGTATTACTGTGCGAGATATGTCACCTGGGGGTATTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  94.8% (273/288)  IGHV1-18*01  277  ..................-------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD3-16*01  17   ---------------------------......----------------------------------------------  22
J  100.0% (41/41)   IGHJ4*02     8    --------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_151721

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           361     4e-102
IGHD5-12*01                                                                                           14.1    8.3   
IGHJ3*02                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TGGTAGAGA	TGGCTAC	CGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGGTAGAGATGGCTACCGCGATGCTTTTGATATC	ASGRDGYRDAFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	239	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2943   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (239/247)  IGHV3-21*01  47   ................................T.............C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  T  T  Y  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2943   91   AGTGGGTCTCATCCATTAGTAGTAGTACCACTTACACATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (239/247)  IGHV3-21*01  137  ...........................GT.G.....T.....................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  S  G  R  D  G  Y  R  D  
                    Query_2943   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTCTGTATTACTGTGCGAGTGGTAGAGATGGCTACCGCGATG  270
V  96.8% (239/247)  IGHV3-21*01  227  ....................................C.............G................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD5-12*01  11   ----------------------------------------------------------------------------.......-------  17
J  100.0% (49/49)   IGHJ3*02     2    --------------------------------------------------------------------------------------....  5

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2943   271  CTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  315
J  100.0% (49/49)   IGHJ3*02     6    .............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_151720

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD3-16*01                                                                                           10.3    115   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGAAAGA	GGGGG	CTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC	ARDQKEGAPDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	241	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2944   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (241/245)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2944   91   TGGATTGGGTATATCTTTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (241/245)  IGHV4-59*01  139  ................A.........................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  K  E  G  A  P  D  Y 
                    Query_2944   181  CAATTCTCCCTGAAACTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC  270
V  98.4% (241/245)  IGHV4-59*01  229  ..G...........G..................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   --------------------------------------------------------------------------.....-----------  22
J  100.0% (41/41)   IGHJ4*02     8    -----------------------------------------------------------------------------------.......  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2944   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (41/41)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_151726

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-22*01                                                                                           25.7    0.003
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGC	AGTAGTGGTTATT	GG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTCGACCCC	ARGGSSGYWWFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2945   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTATTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*01  49   ...............................G..........A....C.......G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  F  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2945   91   TGGATTGGGTTTATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGGGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.9% (234/244)  IGHV4-59*01  139  ..........A.........C.................................A...................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  S  S  G  Y  W  W  F 
                    Query_2945   181  CAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTC  270
V  95.9% (234/244)  IGHV4-59*01  229  ...............C...G.................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD3-22*01  14   ---------------------------------------------------------------------.............--------  26
J  93.5% (43/46)    IGHJ5*02     6    ------------------------------------------------------------------------------------......  11

                                      ----->                                  
                                       D  P  W  G  Q  A  I  P  V  T  V  S  S  
                    Query_2945   271  GACCCCTGGGGCCAGGCAATCCCGGTCACCGTCTCCTCAG  310
J  93.5% (43/46)    IGHJ5*02     12   ................G..C..T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_151725

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           343     2e-96
IGHD2-8*01                                                                                            16.1    2.2  
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCCGGACT	TTGTACTA	CCTACTGCCCTTGGGG	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCCGGACTTTGTACTACCTACTGCCCTTGGGGGGACGTC	ARDPGLCTTYCPWGDV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  D  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2946   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTGAGTGACAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (233/247)  IGHV3-53*01  47   ........................................C...AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  T  T  H  S  G  G  D  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  S  K  
                    Query_2946   91   AATGGGTCTCAACTACTCACAGCGGTGGTGACACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACACTTCCAAGA  180
V  94.3% (233/247)  IGHV3-53*01  137  .G.........GT..T.T.T.........AG..................................................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  G  L  C  T  T  Y  
                    Query_2946   181  ACACTCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAGAGACCCCGGACTTTGTACTACCTACT  270
V  94.3% (233/247)  IGHV3-53*01  227  ....G............................................G.................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD2-8*01   7    ----------------------------------------------------------------------------........------  14

                                      ---------------->                                 
                                      C  P  W  G  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2946   271  GCCCTTGGGGGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  100.0% (40/40)   IGHJ6*02     23   ----------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_191891

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           324     7e-91
IGHD3-10*01                                                                                           16.1    2.1  
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	TCGGAGA	TCGGGGAG	N/A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCATCGGAGATCGGGGAGGATGCTTTTGATATC	ASEIGEDAFDI	232	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	11	0	0	100
CDR1-IMGT	19	42	24	22	2	0	91.7
FR2-IMGT	43	93	51	50	1	0	98
CDR2-IMGT	94	117	24	21	3	0	87.5
FR3-IMGT	118	231	114	110	4	0	96.5
CDR3-IMGT (germline)	232	234	3	3	0	0	100
Total	N/A	N/A	227	217	10	0	95.6


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  V  T  L  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  
                    Query_2947   8    GTGCAGCCTCTGGAGTCACCCTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGCATTA  97
V  95.6% (217/227)  IGHV3-74*01  65   ..............T.....T................................................................T....  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  S  D  G  S  R  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  
                    Query_2947   98   ACAGTGATGGGAGTAGAATAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTTC  187
V  95.6% (217/227)  IGHV3-74*01  155  .T..............C.C..G..................................................................G.  244
                                      N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------CDR3-IMGT----------->             
                                      Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  E  I  G  E  D  A  F  D  I  W  G  Q  G  
                    Query_2947   188  AAATGAACAGTCTGAGAGTCGAAGACACGGCTGTGTATTACTGTGCATCGGAGATCGGGGAGGATGCTTTTGATATCTGGGGCCAAGGGA  277
V  95.6% (217/227)  IGHV3-74*01  245  ..................C...G........................-------------------------------------------  291
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (8/8)     IGHD3-10*01  14   ------------------------------------------------------........----------------------------  21
J  98.0% (48/49)    IGHJ3*02     2    --------------------------------------------------------------............................  29

                                                           
                                      T  M  V  T  V  S  S  
                    Query_2947   278  CAATGGTCACCGTCTCATCAG  298
J  98.0% (48/49)    IGHJ3*02     30   ................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_151728

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGTCGTATTCTTT	TGATAGTAGTGGT	CAGAGTCCCGCG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGTCGTATTCTTTTGATAGTAGTGGTCAGAGTCCCGCGTACTTTGACCAC	ARDLSYSFDSSGQSPAYFDH	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2948   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  C  I  S  G  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2948   91   AGTGGGTCTCATGCATCAGTGGTGGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  ............C...T...A..A..................................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  S  Y  S  F  D  
                    Query_2948   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGTCGTATTCTTTTGATA  270
V  98.4% (246/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD3-22*01  10   -------------------------------------------------------------------------------------.....  14

                                      R3-IMGT------------------------>                                  
                                      S  S  G  Q  S  P  A  Y  F  D  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_2948   271  GTAGTGGTCAGAGTCCCGCGTACTTTGACCACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  336
D  100.0% (13/13)   IGHD3-22*01  15   ........----------------------------------------------------------  22
J  95.7% (44/46)    IGHJ4*02     3    --------------------.........T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_229562

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           335     4e-94
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_2949   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.9% (229/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  N  R  V  T  I  S  V  D  T  S 
                    Query_2949   91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAATCGAGTCACCATTTCCGTAGACACGTCC  180
V  93.9% (229/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C....G............A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_2949   181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  93.9% (229/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_2949   271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  319
J  97.9% (47/48)    IGHJ4*02     1    -....................................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_223587

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           363     1e-102
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	ACATCGGGG	TAGCAGCAACTGGTAC	CCAGAGTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGAACATCGGGGTAGCAGCAACTGGTACCCAGAGTTTGATGCTTTTCATATT	ATEHRGSSNWYPEFDAFHI	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  V  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2950   1    GGTCCCTGAGACTCTCCTGTGAAGTCTCCGGATTCACCTTTAGCAGCTATTCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-23*01  47   .....................C..C...T.....................G......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  S  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2950   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTAGTAGCACATACTACGCAGACTCCGTGAAGGGTCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.4% (241/250)  IGHV3-23*01  137  .............................G...............................C............................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  E  H  R  G  S  S  N  
                    Query_2950   181  AGAACACGCTGCATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGACAGAACATCGGGGTAGCAGCAACT  270
V  96.4% (241/250)  IGHV3-23*01  227  ...........T......................................................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD6-13*01  6    -------------------------------------------------------------------------------........G..  16

                                      -IMGT----------------------->                                  
                                      W  Y  P  E  F  D  A  F  H  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2950   271  GGTACCCAGAGTTTGATGCTTTTCATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  333
D  93.8% (15/16)    IGHD6-13*01  17   .....----------------------------------------------------------  21
J  96.0% (48/50)    IGHJ3*02     1    -------------..........G....C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_311641

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            285     4e-79
IGHD2-8*01                                                                                            14.1    8.7  
IGHJ4*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-8*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGGG	ATGCTAT	CACAACGGCTGCTGTGGGGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACCGGGATGCTATCACAACGGCTGCTGTGGGGGGCTACTTTGATTAC	AKDRDAITTAAVGGYFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	216	34	0	86.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  R  T  S  G  F  I  F  G  H  Y  V  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_2951  1    GGTCCCTGAGACTCTCCTGTAGAACCTCTGGATTCATTTTTGGTCATTATGTCATGCACTGGGTCCGACAACCTCCGGGAAAGGGCCTGG  90
V  86.4% (216/250)  IGHV3-9*01  47   ....................GC.G............CC....A.G......C...............G...G....A..G..........  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  G  L  G  Y  D  N  V  P  V  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_2951  91   AGTGGGTCGCAGGTCTTGGTTACGATAATGTTCCCGTCGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACGACGCCG  180
V  86.4% (216/250)  IGHV3-9*01  137  ........T.....A..A...GGA...G..G.AG.A.A.............................................A.....A  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                     G  N  T  L  Y  L  Q  M  D  S  L  R  D  E  D  T  A  F  Y  Y  C  A  K  D  R  D  A  I  T  T  
                    Query_2951  181  GGAACACCCTCTATCTGCAGATGGACAGTCTGAGAGATGAGGACACAGCCTTCTATTACTGTGCAAAAGACCGGGATGCTATCACAACGG  270
V  86.4% (216/250)  IGHV3-9*01  227  A....T....G........A...A............C.........G.....G.................--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD2-8*01  22   ---------------------------------------------------------------------------.......--------  28

                                     IMGT--------------------->                                  
                                     A  A  V  G  G  Y  F  D  Y  W  G  H  G  V  L  V  T  V  S  S  
                    Query_2951  271  CTGCTGTGGGGGGCTACTTTGATTACTGGGGCCACGGAGTCCTGGTCACCGTCTCCTCAG  330
J  91.5% (43/47)    IGHJ4*01    2    -------------.........C...........A...AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_311646

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           291     6e-81
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	213	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_2952   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  88.8% (213/240)  IGHV4-59*01  49   ..................A......................T.GT.A...C....G.............C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R 
                    Query_2952   91   TGGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGA  180
V  88.8% (213/240)  IGHV4-59*01  139  .......GG.....C.ATT................C..C...........C.....................G.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G 
                    Query_2952   181  CACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGT  270
V  88.8% (213/240)  IGHV4-59*01  229  ..G...........G....G............T..............G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-22*01  7    -----------------------------------------------------------------------------..........A..  19

                                      ----------------------->                                  
                                       G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2952   271  GGCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  328
D  93.3% (14/15)    IGHD3-22*01  20   ..--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    --------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_311644

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            363     1e-102
IGHD1-20*01                                                                                           14.1    8.6   
IGHJ4*02                                                                                              52.6    5e-11 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTAAACCGGGATCGT	GGTATAA	AGGCTACG	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAAACCGGGATCGTGGTATAAAGGCTACGACTGCTTTGACTAC	ARLKPGSWYKGYDCFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  I  H  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_2953   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGGGATCCATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (240/248)  IGHV3-7*01   47   .........................................A.T.G.T.........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  T  Y  Y  V  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2953   91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGAGACATACTATGTGGACTCTTTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (240/248)  IGHV3-7*01   137  ....................C...............A................G....................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  L  K  P  G  S  W  Y  
                    Query_2953   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGACTTAAACCGGGATCGTGGTATA  270
V  96.8% (240/248)  IGHV3-7*01   227  ....................................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-20*01  1    ------------------------------------------------------------------------------------......  6

                                      GT-------------------->                                  
                                      K  G  Y  D  C  F  D  Y  W  G  P  G  N  L  V  R  V  S  S  
                    Query_2953   271  AAGGCTACGACTGCTTTGACTACTGGGGCCCGGGAAACCTGGTCCGTGTTTCCTCAG  327
D  100.0% (7/7)     IGHD1-20*01  7    .--------------------------------------------------------  7
J  85.4% (41/48)    IGHJ4*02     1    ---------...A.................A.....C.......ACC..C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_311645

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2954   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_2954   91   CTCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..G...............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G 
                    Query_2954   181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .........................G................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2954   271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_311648

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           332     3e-93
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGCCTG	ATGGTTCGGGGAGCTATT	TGGAGGGGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGCCTGATGGTTCGGGGAGCTATTTGGAGGGGTTACTTTGACTAC	ARLMVRGAIWRGYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	229	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  F  S  S  S  N  F  Y  W  G  W  I  R  Q  A  P  G  K  G 
                    Query_2955   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCTTCAGCAGTAGTAACTTCTACTGGGGCTGGATCCGCCAGGCCCCAGGGAAGGGA  90
V  93.1% (229/246)  IGHV4-39*01  49   ...................C................A............GT.A......................C.............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  W  Y  S  G  R  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2955   91   CTAGAGTGGATTGGGAATATCTGGTATAGTGGGAGGACTAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  93.1% (229/246)  IGHV4-39*01  139  ..G.............G.....AT...........C..CT........C.........................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  V  R  G  A  I 
                    Query_2955   181  AAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGCGCCTGATGGTTCGGGGAGCTATT  270
V  93.1% (229/246)  IGHV4-39*01  229  .....................C...............................G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  94.4% (17/18)    IGHD3-10*01  9    ------------------------------------------------------------------------.............T....  26

                                      GT------------------>                                  
                                       W  R  G  Y  F  D  Y  W  G  Q  R  T  L  V  T  V  S  S  
                    Query_2955   271  TGGAGGGGTTACTTTGACTACTGGGGCCAGAGAACCCTGGTCACCGTCTCCTCAG  325
J  97.8% (45/46)    IGHJ4*02     3    ---------.....................G........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_311649

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           321     6e-90
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGCG	GGCTGG	N/A	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCTGGCAATTGGTTCGACCCC	ARGRRAGNWFDP	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	104	10	0	91.2
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_2956   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAGTGGGGCTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  91.2% (227/249)  IGHV4-31*02  50   .....TCC...A............................C.....T.G............C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  G  E  R  T  Q  Y  N  P  S  L  K  N  Q  V  T  I  S  G  D  T  S  
                    Query_2956   94   TGGAGTGGATTGGATACATCTATTACGGTGAGAGAACCCAGTACAACCCGTCCCTCAAGAATCAAGTGACCATATCAGGAGACACGTCTA  183
V  91.2% (227/249)  IGHV4-31*02  140  .............G............A...G...C...T.C...................G..G...T..........T...........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      T  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  W  
                    Query_2956   184  CAAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCTGGCAATTGGT  273
V  91.2% (227/249)  IGHV4-31*02  230  AG................A.................................G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD6-19*01  13   ----------------------------------------------------------------------------......--------  18
J  94.0% (47/50)    IGHJ5*02     2    ----------------------------------------------------------------------------------...C....  9

                                      ------->                                  
                                      F  D  P  W  G  Q  G  I  L  V  T  V  T  S  
                    Query_2956   274  TCGACCCCTGGGGCCAGGGAATCCTGGTCACCGTCACCTCAG  315
J  94.0% (47/50)    IGHJ5*02     10   .....................C.............T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_351884

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           382     3e-108
IGHD2-15*01                                                                                           10.3    125   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCTAGAAATCCAGTTCGCCGGACTATC	ACTCC	ACGGTCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCTAGAAATCCAGTTCGCCGGACTATCACTCCACGGTCATTTTGACTAC	ARALEIQFAGLSLHGHFDY	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_2957   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (247/250)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2957   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (247/250)  IGHV4-31*03  139  ..........................................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  A  L  E  I  Q  F  A 
                    Query_2957   181  AAGAACCAATTCTCCCTGAAACTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGCCCTAGAAATCCAGTTCGCC  270
V  98.8% (247/250)  IGHV4-31*03  229  ........G...........G.....................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       G  L  S  L  H  G  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2957   271  GGACTATCACTCCACGGTCATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  100.0% (5/5)     IGHD2-15*01  27   --------.....---------------------------------------------------  31
J  100.0% (43/43)   IGHJ4*02     6    ---------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_351885

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            329     3e-92
IGHD3-22*01                                                                                           12.2    30   
IGHJ3*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTCT	TGGTTA	N/A	TGATA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTCTTGGTTATGATATT	AREGLGYDI	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  F  W  M  S  W  V  R  Q  A  P  G  T  G  L  
                    Query_2958   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAACTTTTGGATGAGCTGGGTCCGCCAGGCTCCTGGTACGGGACTGG  90
V  92.0% (230/250)  IGHV3-7*01   47   .............................................G..A...........................A..G.A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Y  D  G  G  V  R  Y  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_2958   91   AGTGGGTGGCCAACATAAAATACGATGGAGGTGTAAGATACTATGTGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  92.0% (230/250)  IGHV3-7*01   137  ...................GC.A......A...AG.A....................A...............................A  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      E  K  S  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  G  L  G  Y  D  I  
                    Query_2958   181  AGAAGTCATTGCATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTATTGTGCGAGAGAGGGTCTTGGTTATGATATTT  270
V  92.0% (230/250)  IGHV3-7*01   227  ....C...C..T........................................G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-22*01  19   ----------------------------------------------------------------------------......--------  24
J  90.2% (37/41)    IGHJ3*02     10   ----------------------------------------------------------------------------------......C.  17

                                                                       
                                      W  G  Q  G  T  T  V  I  V  S  S  
                    Query_2958   271  GGGGCCAAGGGACAACGGTCATCGTCTCCTCAG  303
J  90.2% (37/41)    IGHJ3*02     18   ...............T.....C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_351886

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD6-19*01                                                                                           21.8    0.040 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGCCCCCCGTACCGCA	TATAGCAGTGCCTG	CCACG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGCCCCCCGTACCGCATATAGCAGTGCCTGCCACGGACTAC	ARWPPVPHIAVPATDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  R  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2959   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTAGGTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.9% (238/243)  IGHV4-59*01  49   ......................................C.....T.............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  M  N 
                    Query_2959   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCATGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  .....................................................................................A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  M  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  W  P  P  V  P  H  I  A  V 
                    Query_2959   181  CAGTTCTCCCTGAAGATGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGATGGCCCCCCGTACCGCATATAGCAGTG  270
V  97.9% (238/243)  IGHV4-59*01  229  ...............C.....................................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  4    --------------------------------------------------------------------------------..........  13

                                      -------------->                                  
                                       P  A  T  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_2959   271  CCTGCCACGGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  319
D  92.9% (13/14)    IGHD6-19*01  14   G...---------------------------------------------  17
J  97.5% (39/40)    IGHJ4*02     9    ---------............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_351887

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           350     8e-99
IGHD3-16*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	T	TTTGGGG	CCCCTCCCCGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGATTTTGGGGCCCCTCCCCGTTACTAC	TTDFGAPPRYY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	105	9	0	92.1
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	240	16	0	93.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2960   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACTTTCTCTAACGCCTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.8% (240/256)  IGHV3-15*01  47   .......T............G....................AG...............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  A  N  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_2960   91   AGTGGGTTGGCCGTATTAAAAGCAAAGCTAATGGTGGGACAACAGACTACGCTGCACCCGTAAAAGGCAGATTCACCATCTCAAGAGATG  180
V  93.8% (240/256)  IGHV3-15*01  137  ..........................A..G...............................G............................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  T  T  V  Y  L  Q  M  N  S  L  K  T  G  D  T  G  V  Y  Y  C  T  T  D  F  G  A  P  
                    Query_2960   181  ATTCAAAGACCACGGTGTATCTCCAAATGAACAGCCTGAAGACCGGGGACACAGGCGTCTATTACTGTACCACAGATTTTGGGGCCCCTC  270
V  93.8% (240/256)  IGHV3-15*01  227  .......A.A....C.......G.................A....A........C...G.................--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (7/7)     IGHD3-16*01  15   -----------------------------------------------------------------------------.......------  21

                                      ---------->                                  
                                      P  R  Y  Y  W  G  Q  G  A  L  V  S  V  S  S  
                    Query_2960   271  CCCGTTACTACTGGGGCCAGGGAGCCCTGGTCAGCGTCTCCTCAG  315
J  94.9% (37/39)    IGHJ4*02     10   ------.................A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_351880

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           329     3e-92
IGHD1-26*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTCTTCCGCA	TATACTGGGAGC	C	ACTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTCTTCCGCATATACTGGGAGCCACTCTGACTAC	ARSSSAYTGSHSDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  T  F  T  F  S  S  H  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2961   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTACATTCACCTTCAGTTCCCACGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  92.3% (229/248)  IGHV3-30*04  47   .............................GG.............AG.T.T...................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  S  D  G  R  I  T  Y  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2961   91   AGTGGGTGGCAGTTATATCATCTGATGGAAGGATCACATACTCCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.3% (229/248)  IGHV3-30*04  137  .....................A.........T.AT.A.....A...............................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      N  N  T  L  F  L  E  M  N  S  L  R  T  E  D  T  A  V  Y  Y  C  A  R  S  S  S  A  Y  T  G  
                    Query_2961   181  ACAACACACTGTTTCTCGAAATGAACAGCCTGAGAACTGAGGACACGGCTGTGTATTACTGTGCGAGATCCTCTTCCGCATATACTGGGA  270
V  92.3% (229/248)  IGHV3-30*04  227  .G.....G....A...GC.................G................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD1-26*01  3    --------------------------------------------------------------------------------....G.....  12

                                      ------------->                                  
                                      S  H  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2961   271  GCCACTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  91.7% (11/12)    IGHD1-26*01  13   ..----------------------------------------------  14
J  97.8% (44/45)    IGHJ4*02     4    ---...T.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_351881

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           419     2e-119
IGHD2-2*02                                                                                            19.9    0.18  
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAAAGTGGCGGGGA	ACCAGCTGTTATA	AAGAGCGCTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCC	ARGKWRGTSCYKERCWFDP	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	278	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  H  T  F  S  N  Y
                    Query_2962   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGACACACCTTTAGCAACTA  90
V  96.5% (278/288)  IGHV5-51*03  6    .................................................................G.......T...G.....C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  R  Y  R  P
                    Query_2962   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATAATCTATCCTGGTGACTCTGAGACCAGATACAGACC  180
V  96.5% (278/288)  IGHV5-51*03  96   ........G.............................................C....................T...........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2962   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.5% (278/288)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  G  K  W  R  G  T  S  C  Y  K  E  R  C  W  F  D  P  W  G  Q  G  T  L  V
                    Query_2962   271  CATGTATTATTGTGCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  360
V  96.5% (278/288)  IGHV5-51*03  276  .........C........------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  92.3% (12/13)    IGHD2-2*02   17   ----------------------------------........C....-------------------------------------------  29
J  100.0% (47/47)   IGHJ5*02     5    ---------------------------------------------------------.................................  37

                                                    
                                        T  V  S  S  
                    Query_2962   361  CACCGTCTCCTCAG  374
J  100.0% (47/47)   IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_351883

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           361     4e-102
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	241	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  R  R  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_2963   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCCGTCGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  96.0% (241/251)  IGHV4-61*01  49   ..........................................A..G...G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 
                    Query_2963   91   CTGGAGTGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCC  180
V  96.0% (241/251)  IGHV4-61*01  139  ..............G...A..T...............................................................C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V 
                    Query_2963   181  AAGAACCAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTG  270
V  96.0% (241/251)  IGHV4-61*01  229  .....................C....C.......................................A....-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------------..........---------  18

                                      -------------->                                  
                                       D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2963   271  GACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_351888

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           310     1e-86
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	N/A	TCATCCTTCCG	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATCCTTCCGACTATGGTTTGGGCGTC	AKDHPSDYGLGV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  D  F  G  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2964   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCAACTTCAGCGACTTTGGCTTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGC  90
V  89.6% (224/250)  IGHV3-30*18  47   ...............................A....C......TAG..A....A...................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      H  W  L  A  V  I  S  Y  D  G  S  I  R  H  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2964   91   ACTGGCTGGCAGTTATATCATATGATGGATCTATTAGACACTATGCAAACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  89.6% (224/250)  IGHV3-30*18  137  .G...G.......................AG..A..A.T........G..........................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  L  K  G  L  T  T  E  D  T  A  M  Y  Y  C  A  K  D  H  P  S  D  Y  G  
                    Query_2964   181  AGAACACGTTGTATCTTCAATTGAAGGGACTTACAACTGAGGACACGGCTATGTATTACTGTGCGAAAGATCATCCTTCCGACTATGGTT  270
V  89.6% (224/250)  IGHV3-30*18  227  ........C.......G...A....CA.C..G.G.G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
J  89.8% (44/49)    IGHJ6*02     13   ---------------------------------------------------------------------------------....C...A  21

                                      ------->                                
                                      L  G  V  W  G  Q  G  T  T  V  I  V  S  S
                    Query_2964   271  TGGGCGTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTC  310
J  89.8% (44/49)    IGHJ6*02     22   ...A............A.............C.........  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_351889

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     3e-93
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGGGTCCT	TATAGTGGGAGC	CCGCAAGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACTTC	AKPGPYSGSPQGYFDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2965   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTTCGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (230/248)  IGHV3-23*01  47   .............................................G..AT........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  T  E  T  G  R  N  S  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  
                    Query_2965   91   AGTGGGTCTCAACTATTACTGAGACTGGTCGTAATTCATACTACGCAGACTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCA  180
V  92.7% (230/248)  IGHV3-23*01  137  ...........G......G..GT.G....G...GCA............................G....C...............T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  G  P  Y  S  G  S  
                    Query_2965   181  AGAACACACTGTATCTGCAAATGAACACCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAACCGGGTCCTTATAGTGGGAGCC  270
V  92.7% (230/248)  IGHV3-23*01  227  .......G...................G........................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD1-26*01  3    -----------------------------------------------------------------------------............-  14

                                      T------------------>                                  
                                      P  Q  G  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2965   271  CGCAAGGGTACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.8% (45/46)    IGHJ4*02     3    --------..........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_198805

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     6e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_2966   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_2966   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_2966   181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_2966   271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_198807

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           357     1e-100
IGHD2-15*01                                                                                           10.3    120   
IGHJ5*02                                                                                              54.5    1e-11 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ5*02	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	C	GGTGG	CCGGGGGGGGGGTCGGCCTTT	GACCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACGGTGGCCGGGGGGGGGGTCGGCCTTTGACCCC	AKDGGRGGGRPLTP	243	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2967   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCAGCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-23*01  47   ........................................T.................C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  G  N  T  Y  Y  P  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2967   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAACACATACTACCCAGACTCCGTTAAGGGCCGGTTTACCATCTCCAGAGACAATTCCA  180
V  95.6% (239/250)  IGHV3-23*01  137  .................................G..........G..........G...........C......................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------CDR3-IMGT---
                                      K  N  T  L  Y  L  Q  M  N  T  L  R  V  E  D  T  A  V  Y  Y  C  A  K  D  G  G  R  G  G  G  
                    Query_2967   181  AGAACACGCTGTATCTCCAAATGAACACACTGAGAGTCGAGGACACGGCGGTATATTACTGTGCGAAAGACGGTGGCCGGGGGGGGGGTC  270
V  95.6% (239/250)  IGHV3-23*01  227  ................G..........GC.......C............C....................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD2-15*01  14   -----------------------------------------------------------------------.....--------------  18

                                      ------------>                                  
                                      R  P  L  T  P  G  A  R  E  P  *  S  V  S  P  Q 
                    Query_2967   271  GGCCTTTGACCCCTGGGGCCAGGGAGCCCTGATCAGTGTCTCCTCAG  317
J  90.0% (36/40)    IGHJ5*02     12   -------..................A.....G...CC..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_198801

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           308     4e-86
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGCG	GGCTGG	G	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCTGGGAACTGGTTCGACCCC	ARGRRAGNWFDP	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	223	26	0	89.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  V  P  G  K  G  
                    Query_2968   4    CCCTGAGACTCTCCTGTAGTGTCTCAGGTGGCTCCATCAGTAGTGGGGCTTACTACTGGAGTTGGATCCGCCAGGTCCCAGGGAAGGGCC  93
V  89.6% (223/249)  IGHV4-31*01  50   .....TCC...A....C.C......T..............C.....T.G............C............CA..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  G  E  N  T  Q  Y  N  P  S  L  K  S  L  V  T  I  S  G  D  T  S  
                    Query_2968   94   TGGAGTGGATTGGATACATCTATTACGGTGAGAATACCCAGTACAACCCGTCCCTCAAGAGTCTGGTTACCATATCAGGAGACACCTCTA  183
V  89.6% (223/249)  IGHV4-31*01  140  .............G............A...G..GC...T.C.......................A.............T......G....  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      T  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  W  
                    Query_2968   184  CGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCTGGGAACTGGT  273
V  89.6% (223/249)  IGHV4-31*01  230  A.................A.................................G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD6-19*01  13   ----------------------------------------------------------------------------......--------  18
J  91.8% (45/49)    IGHJ5*02     3    -----------------------------------------------------------------------------------.......  9

                                      ------->                                  
                                      F  D  P  W  G  H  G  I  L  V  P  V  T  S  
                    Query_2968   274  TCGACCCCTGGGGCCACGGAATCCTGGTCCCCGTCACCTCAG  315
J  91.8% (45/49)    IGHJ5*02     10   ................G....C.......A.....T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_198803

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         336     1e-94
IGHD2-15*01                                                                                           12.2    32   
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTCTCGA	CTACTC	TTCCTGGGGTCTACAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCTCGACTACTCTTCCTGGGGTCTACATTATGGACGTC	ARVSTTLPGVYIMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	56	27	26	1	0	96.3
FR2-IMGT	57	107	51	48	3	0	94.1
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	245	230	15	0	93.9


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  R  L  S  C  V  V  S  G  Y  S  I  S  R  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  
                    Query_2969     4    CCCTGAGACTCTCCTGCGTTGTCTCTGGTTACTCCATCAGCAGGGGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGACTGG  93
V  93.9% (230/245)  IGHV4-38-2*01  50   .....TCC...A......C........................T.......................G.................G....  139
                                           L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  G  T  I  S  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  
                    Query_2969     94   AGTGGATTGGGACTATCTCTCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGGGTCACCATATCAGTGGACACGTCCAAGA  183
V  93.9% (230/245)  IGHV4-38-2*01  140  ............G.....A..........................................A..............A.............  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><-----------------CDR3-IMGT----
                                        N  Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  V  S  T  T  L  P  G  V  
                    Query_2969     184  ACCAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTCCTGTGCGAGAGTCTCGACTACTCTTCCTGGGGTCT  273
V  93.9% (230/245)  IGHV4-38-2*01  230  ...............A......C...............................A..........-------------------------  294
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (6/6)     IGHD2-15*01    25   ------------------------------------------------------------------------......------------  30

                                        ------------->                                 
                                        Y  I  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2969     274  ACATTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  100.0% (43/43)   IGHJ6*02       20   ----...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_198802

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           299     2e-83
IGHD5-18*01                                                                                           14.1    8.2  
IGHJ5*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TTGTC	GGATACA	CCTCTCTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTGTCGGATACACCTCTCTCGACTGGTTCGACCCC	VVGYTSLDWFDP	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	246	1	1	0	0	100
Total	N/A	N/A	243	217	26	0	89.3


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  I  S  S  S  R  Y  Y  W  G  W  I  R  Q  P  P  G  E  G  
                    Query_2970   4    CCCTGAGACTCTCCTGTACTGTCTCTGGCGCCTCCATCAGCAGTAGTCGTTACTACTGGGGTTGGATCCGCCAGCCCCCAGGGGAGGGGC  93
V  89.3% (217/243)  IGHV4-39*01  50   .....TCC...A....C...........T.G................A.............C.....................A......  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  L  G  S  I  Y  Y  P  E  S  P  Y  Y  N  P  S  L  N  Y  R  V  T  M  S  V  D  T  P  
                    Query_2970   94   TGGAGTGGCTTGGGAGTATCTATTATCCTGAGAGCCCCTACTACAACCCGTCCCTCAATTATCGAGTCACCATGTCCGTAGACACGCCCA  183
V  89.3% (217/243)  IGHV4-39*01  140  ........A.................AG..G....A......................GAG............A............T...  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  Q  F  S  L  R  L  D  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  G  Y  T  S  L  D  W  
                    Query_2970   184  AGAACCAGTTCTCCCTGAGACTTGACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGTTGTCGGATACACCTCTCTCGACTGGT  273
V  89.3% (217/243)  IGHV4-39*01  230  ..................AG..GAG...........................G..........---------------------------  292
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                             
D  100.0% (7/7)     IGHD5-18*01  3    --------------------------------------------------------------------.......---------------  9
J  100.0% (48/48)   IGHJ5*02     4    ------------------------------------------------------------------------------------......  9

                                      ------->                                  
                                      F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2970   274  TCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ5*02     10   ..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_223580

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           291     5e-81
IGHD3-22*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAC	ATAGTACTGG	CCGAATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATAGTACTGGCCGAATCATTGACTAT	ARAHSTGRIIDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G 
                    Query_2971   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  87.2% (218/250)  IGHV4-31*01  49   ...................C................A...G.A....TGG..A...C....G.............CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  Y  I  Y  H  V  E  S  T  S  R  N  P  S  L  K  S  Q  L  T  I  S  L  D  P  S 
                    Query_2971   91   CTGGAGTGGATGGGATACATCTATCACGTTGAGAGCACCTCCCGCAACCCGTCCCTCAAGAGTCAACTTACCATTTCACTCGACCCGTCT  180
V  87.2% (218/250)  IGHV4-31*01  139  ...........T..G.........T..AG..G........A.TA....................T.G.......A...G.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  S  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  S  T  G  R  I 
                    Query_2971   181  AAGAGCCAGTTCTCCCTAAAACTGACCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCACATAGTACTGGCCGAATC  270
V  87.2% (218/250)  IGHV4-31*01  229  ....A............G..G....G....G.......................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-22*01  12   -------------------------------------------------------------------------......G...-------  21

                                      -------->                                  
                                       I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2971   271  ATTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.6% (41/42)    IGHJ4*02     7    -.......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_198809

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           353     9e-100
IGHD1-7*01                                                                                            14.1    8.5   
IGHJ4*01                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-7*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGGG	TGGAACT	TACTACCCCCTAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGGGTGGAACTTACTACCCCCTATACTACCTTGACTAC	ARDRGGTYYPLYYLDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2972   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTCGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-48*03  47   ............................................A.............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  G  S  G  G  I  I  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_2972   91   AGTGGCTTTCATACATTAGTGGTAGTGGTGGTATCATATATTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-48*03  137  .....G..............A........A...C......C................A................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  S  S  L  Y  L  Q  M  D  S  L  K  V  E  D  T  A  V  Y  Y  C  A  R  D  R  G  G  T  Y  Y  
                    Query_2972   181  GGAGCTCACTGTATCTGCAAATGGACAGCCTGAAAGTCGAGGACACGGCTGTTTATTACTGTGCGAGAGATCGGGGTGGAACTTACTACC  270
V  95.2% (238/250)  IGHV3-48*03  227  A..A...................A.........G..C.................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-7*01   9    ----------------------------------------------------------------------------.......-------  15

                                      T------------------>                                  
                                      P  L  Y  Y  L  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_2972   271  CCCTATACTACCTTGACTACTGGGGCCTTGGAACCCTGGTCACCGTCTCCTCAG  324
J  93.8% (45/48)    IGHJ4*01     1    ------.....T...............AA.........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_198808

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           310     1e-86
IGHD3-3*01                                                                                            37.2    1e-06
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTCGGGGGACACGA	ATTACGATTTTTGGAGTGG	GGGTGTTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATTCGGGGGACACGAATTACGATTTTTGGAGTGGGGGTGTTCTTGATATC	AKDSGDTNYDFWSGGVLDI	239	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	49	2	0	96.1
CDR2-IMGT	101	124	24	19	5	0	79.2
FR3-IMGT	125	238	114	106	8	0	93
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	232	215	17	0	92.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  S  T  F  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  
                    Query_2973   15   GTGCAGCCTCTGGATCCACCTTTAGCAGTTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGGTATTA  104
V  92.7% (215/232)  IGHV3-23*01  65   ...............T............C..........G............................................C.....  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  F  N  T  N  Y  A  E  S  E  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  
                    Query_2973   105  GTGGCAGTGGTTTTAATACAAACTATGCAGAGTCCGAGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTATCTAC  194
V  92.7% (215/232)  IGHV3-23*01  155  ....T......GG..GC...T....C.....C....T...............................T..........G........G.  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------------CDR3-IMGT-------------
                                      Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  D  S  G  D  T  N  Y  D  F  W  S  G  G  
                    Query_2973   195  AAATGAACAGCCTGAGAGTCGAGGACACGGCCGTATATTACTGTGCGAAAGATTCGGGGGACACGAATTACGATTTTTGGAGTGGGGGTG  284
V  92.7% (215/232)  IGHV3-23*01  245  ..................C.................................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (19/19)   IGHD3-3*01   3    ------------------------------------------------------------------...................-----  21

                                      ---------->                                  
                                      V  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2973   285  TTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  329
J  100.0% (42/42)   IGHJ3*02     9    ---..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_269901

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            403     9e-115
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	269	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	154	27	27	0	0	100
FR3-IMGT	155	268	114	113	1	0	99.1
CDR3-IMGT (germline)	269	275	7	7	0	0	100
Total	N/A	N/A	274	266	8	0	97.1


Alignments

                                     <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                      L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  I  R 
                    Query_2974  2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGATCAGG  91
V  97.1% (266/274)  IGHV6-1*01  31   ........G...T.G.......................................G......G....AG......................  120
                                      L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                     ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                      Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 
                    Query_2974  92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGA  181
V  97.1% (266/274)  IGHV6-1*01  121  ..........................................................................................  210
                                      Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                     --------------------------FR3-IMGT----------------------------------------------------><--
                                      I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_2974  182  ATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCA  271
V  97.1% (266/274)  IGHV6-1*01  211  .........A................................................................................  300
                                      I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                     --------CDR3-IMGT--------->                                  
                                      R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_2974  272  AGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  332
V  97.1% (266/274)  IGHV6-1*01  301  ....---------------------------------------------------------  304
                                      R                                                           
J  97.9% (46/47)    IGHJ3*02    4    --------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_269900

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           433     1e-123
IGHD6-19*01                                                                                           16.1    2.6   
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGTGGGGAAACAGA	AGTGGCTG	CCA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCC	ARLRGETEVAANNWFDP	291	341	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	72	2	0	97.3
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	113	1	0	99.1
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	285	8	0	97.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  M  G  S  G  Y  T  F  A  
                    Query_2975   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTATGGGATCTGGATACACCTTTGCCG  93
V  97.3% (285/293)  IGHV5-51*03  2    ..................................................................A...T..........G....A..A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      G  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  D  T  R  Y  
                    Query_2975   94   GCTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACTCTGATACCAGATACA  183
V  97.3% (285/293)  IGHV5-51*03  92   ............G..............................................A..............................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_2975   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  97.3% (285/293)  IGHV5-51*03  182  ...........................................C..............................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  M  Y  Y  C  A  R  L  R  G  E  T  E  V  A  A  N  N  W  F  D  P  W  G  Q  G  T  L  V  
                    Query_2975   274  CCGCCATGTATTACTGTGCGAGACTTCGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCA  363
V  97.3% (285/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD6-19*01  10   ----------------------------------------........------------------------------------------  17
J  100.0% (50/50)   IGHJ5*02     1    ---------------------------------------------------.......................................  39

                                                 
                                      T  V  S  S 
                    Query_2975   364  CCGTCTCCTCA  374
J  100.0% (50/50)   IGHJ5*02     40   ...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_269902

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            408     4e-116
IGHD2-15*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTC	GTAGAGGTGGTAACTGC	GCTTGGACGTTTAGG	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTCGTAGAGGTGGTAACTGCGCTTGGACGTTTAGGCGGTTTGGACGTC	ARDFVEVVTALGRLGGLDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  L  T  D  Y
                    Query_2976   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCCTCACCGACTA  90
V  94.8% (276/291)  IGHV1-2*04   6    ..................G..........A.................................................T......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  L  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  K  S  G  G  T  N  Y  A  Q
                    Query_2976   91   CTATTTGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCGAAAAGTGGTGGCACAAATTATGCACA  180
V  94.8% (276/291)  IGHV1-2*04   96   ....A..........................................................T..C..............C........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  V  R  R  L  K  F  D  D  T  A
                    Query_2976   181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGTACAGCCTACATGGAGGTGAGAAGGCTGAAATTTGACGACACGGC  270
V  94.8% (276/291)  IGHV1-2*04   186  .............................................C...............C....C.......G..C............  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        V  Y  Y  C  A  R  D  F  V  E  V  V  T  A  L  G  R  L  G  G  L  D  V  W  G  R  G  A  T  V
                    Query_2976   271  CGTGTATTATTGCGCGAGAGATTTCGTAGAGGTGGTAACTGCGCTTGGACGTTTAGGCGGTTTGGACGTCTGGGGCCGAGGGGCCACGGT  360
V  94.8% (276/291)  IGHV1-2*04   276  .........C..T........---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  88.2% (15/17)    IGHD2-15*01  9    -------------------------....T.......G....------------------------------------------------  25
J  91.3% (42/46)    IGHJ6*02     17   ---------------------------------------------------------....A...............A....A.......  49

                                                   
                                        S  V  S  S 
                    Query_2976   361  CTCCGTCTCCTCA  373
J  91.3% (42/46)    IGHJ6*02     50   .A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_269905

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD3-10*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGGAT	GGGAGTTA	CGAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATGGGAGTTACGAAACTTTGACTAC	ARGGWELRNFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_2977   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACAGCTTCACCAACTA  90
V  96.2% (278/289)  IGHV5-51*03  6    ....................C.............................................T..............T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  T  Y  S  P
                    Query_2977   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCACATACAGCCC  180
V  96.2% (278/289)  IGHV5-51*03  96   ............................................................................A...G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  M  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_2977   181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACATGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (278/289)  IGHV5-51*03  186  ........A..........................A........G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  F  C  A  R  G  G  W  E  L  R  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2977   271  CATCTATTTCTGTGCGAGAGGGGGATGGGAGTTACGAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.2% (278/289)  IGHV5-51*03  276  ...G....A..........----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD3-10*01  17   --------------------------........-------------------------------------------------  24
J  100.0% (45/45)   IGHJ4*02     4    --------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_269904

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           360     1e-101
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TTGGGAT	TATGCTTCGGGGACTTATTAT	TCCCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATTGGGATTATGCTTCGGGGACTTATTATTCCCTCTTTGCCTAT	AKDWDYASGTYYSLFAY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2978   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACACCTATGCCATGAGCTGGGTCCGCCAGGCTCCTGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-23*01  47   ..........................................G..G..............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  V  G  S  G  G  S  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  
                    Query_2978   91   AGTGGGTCTCAGGTATTGTTGGTAGTGGTGGTAGCACATTCTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACATTTCCA  180
V  96.0% (240/250)  IGHV3-23*01  137  ............C....AG....................A........................G...................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  W  D  Y  A  S  G  
                    Query_2978   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGGATTGGGATTATGCTTCGGGGA  270
V  96.0% (240/250)  IGHV3-23*01  227  ...................................................................A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.5% (19/21)    IGHD3-10*01  8    -----------------------------------------------------------------------------....G........  20

                                      GT-------------------->                                  
                                      T  Y  Y  S  L  F  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2978   271  CTTATTATTCCCTCTTTGCCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  90.5% (19/21)    IGHD3-10*01  21   G.......-------------------------------------------------  28
J  95.5% (42/44)    IGHJ4*02     5    -------------.....A...C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_269907

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           279     3e-77
IGHD6-19*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGC	GGTATAGTAGTGG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGCGGTATAGTAGTGGCTACTACTACGCTATGGTCGTC	ARPRYSSGYYYAMVV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	96	18	0	84.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	213	35	0	85.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  G  D  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2979   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCGGCGACTTTGGCATGCACTGGGTCCGCCAGGCCCCTGGCAAGGGGCTGG  90
V  85.9% (213/248)  IGHV3-30*03  47   ....................................C....A.TAG..A........................T..A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  G  A  I  S  Y  D  G  K  Y  K  F  Y  R  D  S  L  K  G  R  F  T  I  S  R  D  N  F  
                    Query_2979   91   AGTGGGTAGGAGCTATCTCATATGACGGCAAATATAAATTCTATAGAGACTCTCTGAAGGGCCGCTTCACCATCTCCAGAGACAACTTCG  180
V  85.9% (213/248)  IGHV3-30*03  137  .......G.C..T...A........T..A.GTA......A....GC......CG..........A....................T.C.A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  K  T  V  F  L  E  M  K  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  P  R  Y  S  S  G  Y  
                    Query_2979   181  AGAAGACAGTGTTTCTGGAAATGAAGAGTCTGAGACCTGAGGACACGGCTGTCTATTACTGTGCGAGACCGCGGTATAGTAGTGGCTACT  270
V  85.9% (213/248)  IGHV3-30*03  227  ....C..GC...A....C.......C..C......G................G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD6-19*01  2    ------------------------------------------------------------------------.......C.....-----  14
J  96.4% (53/55)    IGHJ6*02     8    -------------------------------------------------------------------------------------.....  12

                                      ---------------->                                 
                                      Y  Y  A  M  V  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_2979   271  ACTACGCTATGGTCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  96.4% (53/55)    IGHJ6*02     13   ......G.....A.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_269908

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHD3-16*01                                                                                           21.8    0.039
IGHJ2*01                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCT	GGGAGTTATGC	CGAT	TTCAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTGGGAGTTATGCCGATTTCAATATC	AAGSYADFNI	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  R  S  Y  D  M  I  W  V  R  Q  A  P  G  K  G  L  
                    Query_2980   1    GGTCCCTGAGACTCTCCTGTGCAGTTTCCGGATTCACCTTTAGAAGCTATGACATGATTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (229/245)  IGHV3-23*01  47   ........................CC..T..............C.......C.....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  A  S  A  I  S  G  N  G  G  S  S  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2980   91   AGTGGGCCTCAGCTATTAGTGGAAATGGTGGTAGTTCATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.5% (229/245)  IGHV3-23*01  137  ......T...............T.G.........CA......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  I  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  A  G  S  Y  A  D  F  N  
                    Query_2980   181  AGAACATTCTGTATTTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTATATTACTGTGCGGCTGGGAGTTATGCCGATTTCAATA  270
V  93.5% (229/245)  IGHV3-23*01  227  ......CG......C.....................C............................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD3-16*01  20   --------------------------------------------------------------------...........-----------  30
J  88.4% (38/43)    IGHJ2*01     11   -----------------------------------------------------------------------------------...G..C  17

                                      ->                                  
                                      I  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2980   271  TCTGGGGCCGGGGCACGTTGGTCACTGTCTCCTCAG  306
J  88.4% (38/43)    IGHJ2*01     18   ..........T.....CC..................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_262176

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           371     7e-105
IGHD2-21*02                                                                                           18.0    0.67  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACTG	GGTGGGGACTACTAT	GGTCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTC	VRRLGGDYYGPFEF	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	69	6	0	92
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	105	9	0	92.1
CDR3-IMGT (germline)	292	298	7	6	1	0	85.7
Total	N/A	N/A	295	266	29	0	90.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  E  I  S  C  K  A  Y  G  Y  A  F  N 
                    Query_2981   4    GAGGTCCAGCTGGTACAGTCTGGAGCAGAAGTGAAAAAGCCCGGGGAGTCTCTGGAGATCTCCTGTAAGGCTTATGGATACGCCTTTAAC  93
V  90.2% (266/295)  IGHV5-51*01  1    .....G........G..............G........................A...............G..C.......AG.....C.  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  W  I  G  W  V  R  Q  K  P  E  K  G  L  D  W  M  G  V  I  Y  P  D  D  L  D  T  T  Y 
                    Query_2981   94   GACTACTGGATCGGCTGGGTGCGCCAGAAGCCCGAGAAAGGCCTGGATTGGATGGGGGTCATCTATCCTGATGACCTTGATACGACATAC  183
V  90.2% (266/295)  IGHV5-51*01  91   AG..........................T.....G............G.........A............G....TC......C.G....  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  N  T  I  Y  L  R  W  S  S  L  K  A  S  D 
                    Query_2981   184  AGTCCGTCCTTCCAAGGCCAGGTCACAATCTCAGTCGACAAGTCCATCAACACCATCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGAC  273
V  90.2% (266/295)  IGHV5-51*01  181  ..C.......................C.......C..............G....GC........A.........................  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  M  Y  Y  C  V  R  R  L  G  G  D  Y  Y  G  P  F  E  F  W  G  Q  G  T  Q  V  T  V  S 
                    Query_2981   274  ACCGCCATGTATTATTGTGTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTCTGGGGCCAGGGAACCCAGGTCACCGTCTCC  363
V  90.2% (266/295)  IGHV5-51*01  271  ..............C....C.....-----------------------------------------------------------------  295
                                       T  A  M  Y  Y  C  A  R                                                                   
D  86.7% (13/15)    IGHD2-21*02  11   ------------------------------.....T....G....---------------------------------------------  25
J  93.0% (40/43)    IGHJ4*02     6    ---------------------------------------------------.....C.A.................T.............  44

                                          
                                       S  
                    Query_2981   364  TCAG  367
J  93.0% (40/43)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_273032

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGGGAA	AACGAC	TGGGATCGTAGGTGGTCCGGT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGGGAAAACGACTGGGATCGTAGGTGGTCCGGTTTTCACTTC	ASRENDWDRRWSGFHF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	224	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  P  T  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2982   1    ACCCTGTCCCCCACCTGCACCGTCTCTGGTGGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.6% (224/242)  IGHV4-59*08  49   ..........T.........T......................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       L  I  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S  R  N 
                    Query_2982   91   TTGATTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGTCGACTCACCATCTCAGTAGACACGTCGAGGAAC  180
V  92.6% (224/242)  IGHV4-59*08  139  .G......G...A........A........A.....................A.......G.......A..............C.A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  S  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  N  D  W  D  R  R  W 
                    Query_2982   181  CAGTTCTCCCTGAGCGTGAACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCGAGCCGGGAAAACGACTGGGATCGTAGGTGG  270
V  92.6% (224/242)  IGHV4-59*08  229  .............AGC...G.........C................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD1-1*01   12   ---------------------------------------------------------------------......---------------  17

                                      -------------->                                  
                                       S  G  F  H  F  W  G  P  G  T  L  V  T  V  S  S  
                    Query_2982   271  TCCGGTTTTCACTTCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  319
J  93.0% (40/43)    IGHJ4*02     6    ------...G...A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_144400

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2983   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ........................................G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_2983   91   TGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ........G...A..T...............................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y 
                    Query_2983   181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............C....C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2983   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_144401

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           347     7e-98
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-3*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CGCCAACCCCC	ATTACGATTTTTGGAATGG	CTACCCCGTACAAGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCGCCAACCCCCATTACGATTTTTGGAATGGCTACCCCGTACAAGGGTGGTTCGACCCC	AANPHYDFWNGYPVQGWFDP	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	233	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_2984   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.5% (233/244)  IGHV3-30*03  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  G  V  I  S  H  D  G  I  N  K  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_2984   91   AGTGGGTGGGAGTTATTTCACATGATGGAATTAATAAATACTATGCAGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.5% (233/244)  IGHV3-30*03  137  .........C......A...T.........G.........................A.................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  F  L  Q  M  N  S  L  *  A  E  D  T  A  I  Y  F  C  A  A  N  P  H  Y  D  F  W  
                    Query_2984   181  AGAACACGCTGTTTCTGCAAATGAACAGCCTGTGAGCTGAGGACACGGCTATTTATTTCTGTGCCGCCAACCCCCATTACGATTTTTGGA  270
V  95.5% (233/244)  IGHV3-30*03  227  ............A...................A.................G.G....A......--------------------------  290
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.7% (18/19)    IGHD3-3*01   3    ---------------------------------------------------------------------------...............  17

                                      R3-IMGT------------------------>                                  
                                      N  G  Y  P  V  Q  G  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_2984   271  ATGGCTACCCCGTACAAGGGTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  336
D  94.7% (18/19)    IGHD3-3*01   18   G...--------------------------------------------------------------  21
J  97.8% (45/46)    IGHJ5*02     6    --------------------........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_144402

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           39.1    3e-07
IGHJ2*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTGCCCATGA	ATTACTATGATAGTAGTGGCTCTTAC	ATTGGGAGCGTTA	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTGCCCATGAATTACTATGATAGTAGTGGCTCTTACATTGGGAGCGTTAGGTACTTCGATTTC	ARDVPMNYYDSSGSYIGSVRYFDF	238	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_2985   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTTTTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   ........................................G.....AC........C............C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  A  K  N 
                    Query_2985   91   TGGATTGGCTATGTCTATTCCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGCCGAGTCACCTTATCAGTGGACACGGCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G...A......A....................................T.........A.......A......T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------------C
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  V  P  M  N  Y  Y  D  S 
                    Query_2985   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATGTGCCCATGAATTACTATGATAGT  270
V  94.3% (231/245)  IGHV4-59*01  229  .............A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.3% (24/26)    IGHD3-22*01  3    ----------------------------------------------------------------------------..............  16

                                      DR3-IMGT------------------------------>                                  
                                       S  G  S  Y  I  G  S  V  R  Y  F  D  F  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2985   271  AGTGGCTCTTACATTGGGAGCGTTAGGTACTTCGATTTCTGGGGCCGTGGCACCCTGGTCACTGTCTCTTCAG  343
D  92.3% (24/26)    IGHD3-22*01  17   .....T.A....-------------------------------------------------------------  28
J  95.8% (46/48)    IGHJ2*01     6    -------------------------...........C...............................C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_56063

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         363     1e-102
IGHD3-16*02                                                                                           25.7    0.003 
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGCAGCC	TGGGGGAATTATCGTT	C	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGCAGCCTGGGGGAATTATCGTTCCTTTGACTAC	ARAAWGNYRSFDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  D  G  S  I  S  G  G  G  F  Y  W  S  W  H  R  Q  P  P  G  K  G 
                    Query_2986     1    ACCCTGTCCCTCACCTGCACTGTCTCTGATGGCTCCATCAGCGGTGGTGGTTTCTACTGGAGTTGGCACCGCCAGCCCCCAGGGAAGGGC  90
V  96.8% (240/248)  IGHV4-30-4*01  49   ............................G.............A......A..A.............AT......................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2986     91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  96.8% (240/248)  IGHV4-30-4*01  139  ..........................................................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  A  A  W  G  N  Y  R 
                    Query_2986     181  AAGAACCACTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTTCTGTGCCAGGGCAGCCTGGGGGAATTATCGT  270
V  96.8% (240/248)  IGHV4-30-4*01  229  ........G.................................................A.........----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  93.8% (15/16)    IGHD3-16*02    17   ---------------------------------------------------------------------------.......G.......  31

                                        ----------->                                  
                                         S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2986     271  TCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  93.8% (15/16)    IGHD3-16*02    32   .---------------------------------------------  32
J  100.0% (44/44)   IGHJ4*02       5    --............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_144404

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*03                                                                                           322     2e-90
IGHD4-4*01                                                                                            18.0    0.55 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*03	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	ACTTA	TGACTACAG	GGGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTTATGACTACAGGGGGGGTTTTGACTAC	ATYDYRGGFDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	223	17	0	92.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  H  Y  Y  W  S  W  I  R  Q  T  P  G  E  G  L  E 
                    Query_2987   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTCATTACTACTGGAGCTGGATCCGGCAGACCCCAGGGGAGGGACTGGAG  90
V  92.9% (223/240)  IGHV4-59*03  49   .......................................A..AG.........................C........A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  H  N  G  Y  T  T  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_2987   91   TGGATTGGCTATATCTATCACAACGGGTACACCACCTACAACCCCTCCCTCGAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAGAAG  180
V  92.9% (223/240)  IGHV4-59*03  139  ........G.........T...GT...AG.....A................A................A....................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  Y  D  Y  R  G  G  F  D  Y 
                    Query_2987   181  CAATTCTCCCTGAAGTTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGACTTATGACTACAGGGGGGGTTTTGACTAC  270
V  92.9% (223/240)  IGHV4-59*03  229  ...............C....C.......................................------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD4-4*01   1    -----------------------------------------------------------------.........----------------  9
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------------------------------------------------------.........  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2987   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (43/43)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_144405

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD2-8*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TAATGGTGT	GGCAGTGGCTAGAAGATTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAATGGTGTGGCAGTGGCTAGAAGATTTTTTGACTCC	ARDNGVAVARRFFDS	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  I  S  G  G  S  F  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  E  G  L  E 
                    Query_2988   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGGCTCCTTCAGTTCTTATTACTGGAGCTGGATTCGGCAGTCCCCAGGGGAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   .....................G..............A.....AG...C..............C......C........A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2988   91   TGGATTGGCTATGTCTACTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G...A....T..C.....................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  N  G  V  A  V  A  R  R 
                    Query_2988   181  CAGTTCTCCCTGAGGCTGACGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATAATGGTGTGGCAGTGGCTAGAAGA  270
V  93.5% (229/245)  IGHV4-59*01  229  .............A.....GC..........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD2-8*01   13   -----------------------------------------------------------------.........----------------  21

                                      ----------->                                  
                                       F  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_2988   271  TTTTTTGACTCCTGGGGCCAGGGAATCCTGGTCACCGTTTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.......A..............C............C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_144406

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_2989   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_2989   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_2989   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_2989   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_144407

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           43.0    2e-08
IGHJ3*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TATCACTGC	TTACTATGATAGTAGTGGTTAT	A	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATATCACTGCTTACTATGATAGTAGTGGTTATAATGCTTTTGATATC	VRDITAYYDSSGYNAFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  L  R  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_2990   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCCTTAGGAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ...................................A..T....C.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  D  S  S  V  S  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_2990   91   AGTGGGTCTCAGGTATTAGTGATAGTAGTGTTAGTACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATTTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  ............C........G....G...G...C...T..................................C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  V  Q  M  N  R  M  R  A  E  D  T  A  V  Y  Y  C  V  R  D  I  T  A  Y  Y  D  
                    Query_2990   181  AGAACACGCTGTATGTGCAAATGAACAGAATGAGAGCCGAGGACACGGCCGTATATTACTGTGTGAGAGATATCACTGCTTACTATGATA  270
V  93.6% (234/250)  IGHV3-23*01  227  ..............C.............CC.................................C..A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (22/22)   IGHD3-22*01  4    -------------------------------------------------------------------------------...........  14

                                      IMGT--------------------->                                  
                                      S  S  G  Y  N  A  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2990   271  GTAGTGGTTATAATGCTTTTGATATCTGGGGCCAAGGGACATTGGTCACCGTCTCTTCAG  330
D  100.0% (22/22)   IGHD3-22*01  15   ...........-------------------------------------------------  25
J  97.9% (47/48)    IGHJ3*02     3    ------------.............................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_144408

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            392     2e-111
IGHD7-27*01                                                                                           10.3    124   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	AGAGGGC	CTGGG	TTGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGAAGAGGGCCTGGGTTGGTTGACTAC	AHRRGPGLVDY	263	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	45	1	0	97.8
CDR1-IMGT	47	76	30	27	3	0	90
FR2-IMGT	77	127	51	49	2	0	96.1
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	112	2	0	98.2
CDR3-IMGT (germline)	263	271	9	9	0	0	100
Total	N/A	N/A	271	261	10	0	96.3


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  T  T  G  G  V  A  V  A  W  I  R
                    Query_2991   1    GCTAGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCACCACTGGTGGAGTGGCTGTGGCCTGGATCCG  90
V  96.3% (261/271)  IGHV2-5*01   30   ...G.......................................................G....A.........G.....G.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  D  W  L  A  L  I  D  G  N  D  D  K  R  F  S  P  S  L  K  S  R  L  T
                    Query_2991   91   TCAGCCCCCAGGAAAGGCCCTGGACTGGCTTGCACTCATTGATGGGAATGATGATAAGCGCTTCAGCCCATCTCTGAAGAGCAGGCTCAC  180
V  96.3% (261/271)  IGHV2-5*01   120  ........................G...............T..T..................A...........................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  H  C  A  H  R
                    Query_2991   181  CATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATCACTGTGCACACAG  270
V  96.3% (261/271)  IGHV2-5*01   210  ............................................................................T.............  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  R

                                      ----CDR3-IMGT----------->                                  
                                        R  G  P  G  L  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2991   271  AAGAGGGCCTGGGTTGGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  329
V  96.3% (261/271)  IGHV2-5*01   300  .----------------------------------------------------------  300
                                                                                                 
D  100.0% (5/5)     IGHD7-27*01  5    --------.....----------------------------------------------  9
J  100.0% (42/42)   IGHJ4*02     7    -----------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_77698

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ATTTCT	TATGGTTCGGGGAGT	CACGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAATTTCTTATGGTTCGGGGAGTCACGGGTGGTTCGACCCC	ARISYGSGSHGWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  K  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_2992   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAAATACTTCTGGAGTTGGATCCGTCAGCCCCCCGGGAAGGGCCTGGAG  90
V  90.9% (221/243)  IGHV4-59*01  49   ...............................G.........T.GT....A......C........G........A........A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  I  G  T  T  S  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_2992   91   TGGATTGGTTACATCTATTACATTGGGACCACCAGCTACAACCCCTCCCTCGAGAGTCGCGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  90.9% (221/243)  IGHV4-59*01  139  ........G..T..........G.....G.....A................A.......A..............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  R  A  M  Y  Y  C  A  R  I  S  Y  G  S  G  S  H  G 
                    Query_2992   181  CAGTTCTCCCTGAAGCTAACGTCTGTGACCGCTGCGGACAGGGCCATGTATTACTGTGCGCGAATTTCTTATGGTTCGGGGAGTCACGGG  270
V  90.9% (221/243)  IGHV4-59*01  229  .................G.GC...................C....G..............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (15/15)   IGHD3-10*01  8    ---------------------------------------------------------------------...............------  22

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2992   271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (46/46)   IGHJ5*02     6    ..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_273033

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           349     2e-98
IGHD3-9*01                                                                                            29.5    2e-04
IGHJ5*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATCCAC	GTATAACGATGTTTTGACTGG	CCAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATCCACGTATAACGATGTTTTGACTGGCCATAACTGGTTCGACCCC	ARGSTYNDVLTGHNWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  L  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2993   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCATTCTCAGTAGTTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-48*03  47   ....................G...............CCT...................C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  V  R  G  S  T  I  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  H  A  
                    Query_2993   91   AGTGGGTTTCATACATTAGTGTTAGAGGTAGTACCATATACTACGCAGACTCTGTGCAGGGCCGATTTACCATCTCTAGAGACCACGCCA  180
V  94.8% (236/249)  IGHV3-48*03  137  ....................AG...T..............................A..........C........C......A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      T  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  S  T  Y  N  D  V  
                    Query_2993   181  CGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGATCCACGTATAACGATGTTT  270
V  94.8% (236/249)  IGHV3-48*03  227  A....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD3-9*01   1    ----------------------------------------------------------------------------....T.....A...  14

                                      IMGT--------------------->                                  
                                      L  T  G  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2993   271  TGACTGGCCATAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  90.5% (19/21)    IGHD3-9*01   15   .......-----------------------------------------------------  21
J  100.0% (49/49)   IGHJ5*02     3    -----------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_204522

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTCCAGTGG	GTGGCTGGT	GCAGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTCCAGTGGGTGGCTGGTGCAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGAGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_2994   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_2994   91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_2994   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTCCAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  A  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2994   271  GGGTGGCTGGTGCAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (9/9)     IGHD6-19*01  11   --.........-------------------------------------------------------  19
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_204520

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           321     7e-90
IGHD6-19*01                                                                                           18.0    0.60 
IGHJ2*01                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAA	CAGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAACAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQQWLPGDWYFDL	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  R  N  Y  W  S  W  I  R  Q  P  P  G  E  R  L  E 
                    Query_2995   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCACTAGAAACTACTGGAGCTGGATCCGGCAGCCCCCAGGTGAGAGACTGGAG  90
V  92.2% (224/243)  IGHV4-59*08  49   ...................C...........G........G...TT...............................GA..G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  T 
                    Query_2995   91   TGGATTGCATATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGACC  180
V  92.2% (224/243)  IGHV4-59*08  139  .......GG......T...........AG...........................................G...............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  F  L  P  A  V  Q  Q  W  L 
                    Query_2995   181  CAGTTCTCCCTGAAGATGACTTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGATTCCTCCCCGCGGTGCAACAGTGGCTG  270
V  92.2% (224/243)  IGHV4-59*08  229  ...............C...GC........................G.................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-19*01  9    ---------------------------------------------------------------------------------.........  17

                                      ----------------------->                                  
                                       P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_2995   271  CCAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  328
J  100.0% (51/51)   IGHJ2*01     3    -------...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_204521

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD1-26*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGG	TAGTGGG	CAATACAGTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCT	ARGGSGQYSAYFGS	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  I  S  D
                    Query_2996   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCATCTGGATACAGCTTTATCAGTGA  90
V  92.4% (267/289)  IGHV5-51*01  6    .............................A....................A..............GT................C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  G  K  G  L  D  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  S  P
                    Query_2996   91   CTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGACTGGATGGGGGTCATTTATCCTGGTGACTCTGAAACCAGATATAGTCC  180
V  92.4% (267/289)  IGHV5-51*01  96   .......................T..................G.........A....C.................T........C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  T  S  L  K  A  P  D  P  A
                    Query_2996   181  GTCCTTCCAAGGCCAGGTCACCATTTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGACCAGCCTGAAGGCCCCGGACCCCGC  270
V  92.4% (267/289)  IGHV5-51*01  186  ........................C...................G....................G.............T.....A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  F  C  A  R  G  G  S  G  Q  Y  S  A  Y  F  G  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2996   271  CATATACTTCTGTGCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  92.4% (267/289)  IGHV5-51*01  276  ...G..T.A..........----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD1-26*01  5    ------------------------.......----------------------------------------------------------  11
J  93.6% (44/47)    IGHJ4*02     2    ------------------------------------------........A..AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_204526

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           386     1e-109
IGHD3-10*01                                                                                           23.8    0.011 
IGHJ1*01                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TAACGGCG	GGTTCGGGGAGT	N/A	CTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAACGGCGGGTTCGGGGAGTCTGAATACTTCCAGCAC	ARHNGGFGESEYFQH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	249	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_2997   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  99.2% (249/251)  IGHV4-39*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  C  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_2997   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACTGCCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  99.2% (249/251)  IGHV4-39*01  139  .............................................AA...........................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  N  G  G  F  G  E 
                    Query_2997   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATAACGGCGGGTTCGGGGAG  270
V  99.2% (249/251)  IGHV4-39*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD3-10*01  11   -------------------------------------------------------------------------------...........  21

                                      ----------------->                                  
                                       S  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_2997   271  TCTGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (12/12)   IGHD3-10*01  22   .---------------------------------------------------  22
J  100.0% (51/51)   IGHJ1*01     2    -...................................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_204524

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            338     5e-95
IGHD6-6*01                                                                                            12.2    32   
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CAAG	TCGTCC	GAAATCGACA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACAAGTCGTCCGAAATCGACAACTTCTACGGTTTGGACGTC	AKDKSSEIDNFYGLDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  F  G  F  T  F  E  D  Y  A  M  H  W  V  R  Q  G  P  G  K  G  L  
                    Query_2998  1    GGTCCCTGAGACTCTCCTGTGCAGCCTTTGGATTCACGTTTGAAGATTATGCCATGCACTGGGTCCGGCAAGGTCCAGGGAAGGGCCTGG  90
V  93.2% (233/250)  IGHV3-9*01  47   ...........................C.........C.....T............................C.................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  I  S  W  N  G  Y  T  I  A  Y  A  D  S  V  K  G  R  F  T  L  S  R  D  N  A  
                    Query_2998  91   AATGGGTCTCAGGAATTAGTTGGAATGGTTATACCATAGCCTATGCGGACTCTGTGAAGGGCCGATTCACCCTCTCCAGAGACAACGCCA  180
V  93.2% (233/250)  IGHV3-9*01  137  .G...........T............A..GG..G.....G...............................A..................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                     R  N  S  L  Y  L  Q  M  N  S  L  G  A  D  D  T  A  F  Y  Y  C  A  K  D  K  S  S  E  I  D  
                    Query_2998  181  GGAACTCCCTGTATCTGCAAATGAACAGTCTGGGAGCTGACGACACGGCCTTCTATTATTGTGCAAAAGACAAGTCGTCCGAAATCGACA  270
V  93.2% (233/250)  IGHV3-9*01  227  A...............................A.......G...........G.....C...........--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD6-6*01  13   --------------------------------------------------------------------------......----------  18

                                     T------------------>                                 
                                     N  F  Y  G  L  D  V  W  G  Q  G  T  T  A  T  V  S  S 
                    Query_2998  271  ACTTCTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGCCACCGTCTCCTCA  323
J  94.3% (50/53)    IGHJ6*02    10   ...A.......A...........................T.............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_204525

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           310     1e-86
IGHD4-17*01                                                                                           12.2    33   
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCTCGCGAAGGG	GACTAC	CCTAGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGCTCGCGAAGGGGACTACCCTAGGGACTACTACCACGGGATGGACGTC	ARDAREGDYPRDYYHGMDV	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	10	1	0	90.9
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	50	1	0	98
CDR2-IMGT	102	125	24	19	5	0	79.2
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	232	215	17	0	92.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  S  R  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  
                    Query_2999   16   GTACAGCCTCTGGATTCACCTTCAGTCGCTATACCATGAACTGGGTCCGCCAGGCTCCCGGGAAGGGGCTGGAGTGGGTCTCATCCATTA  105
V  92.7% (215/232)  IGHV3-21*01  65   ..G.......................A......G........................A...............................  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  T  S  T  F  I  Y  Y  S  D  S  L  K  G  R  F  T  I  S  R  D  N  A  E  N  S  L  H  L  
                    Query_2999   106  GTAGCACTAGCACTTTCATATACTACTCCGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCGAGAACTCCCTGCATCTGC  195
V  92.7% (215/232)  IGHV3-21*01  155  ....T.G...T.G..A..........G.A......G...................................A.......A...T......  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-----------------------CDR3-IMGT-------------
                                      Q  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  R  D  A  R  E  G  D  Y  P  R  D  Y  Y  H  
                    Query_2999   196  AAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTTCTGTGCGAGAGATGCTCGCGAAGGGGACTACCCTAGGGACTACTACCACG  285
V  92.7% (215/232)  IGHV3-21*01  245  ..................C....................A............--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (6/6)     IGHD4-17*01  2    -----------------------------------------------------------------......-------------------  7
J  94.6% (53/56)    IGHJ6*02     7    ------------------------------------------------------------------------------........T...  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  G  S  S 
                    Query_2999   286  GGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGGCTCCTCA  329
J  94.6% (53/56)    IGHJ6*02     19   .T..................................T.......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_204529

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           341     5e-96
IGHD3-10*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	230	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  R  I  R  Q  P  P  G  K  G  L  E 
                    Query_3000   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCCGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.0% (230/242)  IGHV4-59*01  49   ..........................................AG.............T................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3000   91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.0% (230/242)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_3000   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  95.0% (230/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3000   271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_258279

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           353     9e-100
IGHD6-19*01                                                                                           18.0    0.59  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGCAGGA	AGTGGCTGG	CCCCGGGGTCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGCAGGAAGTGGCTGGCCCCGGGGTCATTTTGACTAC	ARVAGSGWPRGHFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_3001   1    ACCCTGTCCCTCACCTGCACTGTCTCCGGTGGATCCGTCAGCAGTAGTAGTTACTATTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGA  90
V  95.2% (238/250)  IGHV4-61*01  49   ..........................T.....C............G..........C.......................A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  E  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S 
                    Query_3001   91   CTGGAGTGGATTGAGTATATCTATTACAGGGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCGTATCAGTCGACACGTCC  180
V  95.2% (238/250)  IGHV4-61*01  139  .............G...............T....G.....................................A.......A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  A  G  S  G  W  P 
                    Query_3001   181  AAGAACCAGTTCTCCCTGAAACTGAGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTAGCAGGAAGTGGCTGGCCC  270
V  95.2% (238/250)  IGHV4-61*01  229  ....................G.....C...........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD6-19*01  10   ------------------------------------------------------------------------------.........---  18

                                      ----------------->                                
                                       R  G  H  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S
                    Query_3001   271  CGGGGTCATTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTC  320
J  97.6% (40/41)    IGHJ4*02     6    ---------......................C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_283434

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3002   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_3002   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_3002   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3002   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_226450

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_3003   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_3003   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_3003   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_3003   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_77696

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         318     6e-89
IGHD3-22*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCCCCCGA	GATAGTAGT	AAATATTACCTTAGATCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCCCCCGAGATAGTAGTAAATATTACCTTAGATCGTTTGACTAT	ARSPRDSSKYYLRSFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	56	27	22	5	0	81.5
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  R  L  S  C  D  V  S  G  Y  T  I  R  S  D  N  Y  W  G  W  I  R  Q  P  P  G  Q  G  L  
                    Query_3004     4    CCCTGAGACTCTCCTGCGATGTCTCTGGTTACACCATAAGGAGTGATAACTACTGGGGCTGGATCCGGCAGCCCCCAGGGCAGGGGCTGG  93
V  91.4% (224/245)  IGHV4-38-2*01  50   .....TCC...A......C.............T....C..C....G.T................................A.........  139
                                           L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  G  S  M  Y  H  S  G  S  A  Y  Y  N  P  S  L  Q  S  R  V  A  I  S  V  D  T  S  K  
                    Query_3004     94   AGTGGATTGGGAGTATGTATCATAGTGGGAGCGCCTACTACAACCCGTCCCTCCAGAGTCGAGTCGCCATATCCGTAGACACGTCCAAGA  183
V  91.4% (224/245)  IGHV4-38-2*01  140  ................C...............A....................A...........A.......A................  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><--------------------CDR3-IMGT-
                                        N  Q  F  S  L  N  L  Y  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  R  D  S  S  K  Y  
                    Query_3004     184  ACCAGTTCTCCCTGAACCTCTACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGATCCCCCCGAGATAGTAGTAAATATT  273
V  91.4% (224/245)  IGHV4-38-2*01  230  ................G..GAG...............A...........................-------------------------  294
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (9/9)     IGHD3-22*01    11   --------------------------------------------------------------------------.........-------  19

                                        ------------------->                                  
                                        Y  L  R  S  F  D  Y  W  G  L  G  T  L  V  A  V  F  S  
                    Query_3004     274  ACCTTAGATCGTTTGACTATTGGGGCCTGGGAACCCTGGTCGCCGTCTTCTCAG  327
J  90.7% (39/43)    IGHJ4*02       6    -----------........C.......A.............A......C.....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_283437

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           400     9e-114
IGHD2-21*01                                                                                           18.0    0.69  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	G	ATTGCGGTGGTG	TAGTGATGGAACTTGTTACTCTGGTTCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTAT	ARRLRWCSDGTCYSGSFEY	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	69	5	0	93.2
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	294	275	19	0	93.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  K  F  T  
                    Query_3005   3    AGATGCAGCTGGTGCAGTCTGGGGCAGAGGTGAAGAAGCCCGGAGAGTCTCTTAAGATCTCCTGTAAGGGTTCTGGATACAAGTTTACCA  92
V  93.5% (275/294)  IGHV5-51*01  2    ..G...................A...........A........G........G............................GC.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  F  P  R  D  S  D  T  R  Y  
                    Query_3005   93   GCTATTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTCGTGACTCCGATACCAGATATA  182
V  93.5% (275/294)  IGHV5-51*01  92   ....C......................T...........................G.......A....G.......T...........C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  Q  D  Q  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  D  S  L  K  A  S  D  
                    Query_3005   183  ACCCGTCCTTCCAAGACCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTACCTGCAGTGGGACAGCCTGAAGGCCTCGGACA  272
V  93.5% (275/294)  IGHV5-51*01  182  G..............G.......................A............................AG....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  M  Y  Y  C  A  R  R  L  R  W  C  S  D  G  T  C  Y  S  G  S  F  E  Y  W  G  Q  G  T  
                    Query_3005   273  CCGCCATGTATTACTGTGCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTATTGGGGCCAGGGAACCC  362
V  93.5% (275/294)  IGHV5-51*01  272  ........................------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  91.7% (11/12)    IGHD2-21*01  6    -------------------------....T.......-----------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------------------------.....C..C................  30

                                                        
                                      L  V  T  V  S  S  
                    Query_3005   363  TGGTCACCGTCTCCTCAG  380
J  95.3% (41/43)    IGHJ4*02     31   ..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_33678

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD6-19*01                                                                                           21.8    0.039 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCG	GCAGTGGCTGG	GCCGGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCGGCAGTGGCTGGGCCGGGATTGACTAC	AKDRGSGWAGIDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_3006   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGCTGGATCCGGCAGACCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   .............................................T.......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_3006   91   TGGATTGGGTATATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCAATAGACACGTCCAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  ....................C...............................................A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  D  R  G  S  G  W  A  G  I 
                    Query_3006   181  CAGTTCTCCCTGAGGCTGAACTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAAAGATCGCGGCAGTGGCTGGGCCGGGATT  270
V  96.3% (236/245)  IGHV4-59*01  229  .............A.....G...........................G.............G...-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (11/11)   IGHD6-19*01  8    ----------------------------------------------------------------------...........---------  18
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_3006   271  GACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  310
J  97.6% (41/42)    IGHJ4*02     9    ...................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_344826

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           294     7e-82
IGHD3-10*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	TGCCCCTGAC	GTATTAGTCCGGTTCGGGGAG	CCTCTCCTAAGTAGAGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATGCCCCTGACGTATTAGTCCGGTTCGGGGAGCCTCTCCTAAGTAGAGGTTTTGATATC	ANAPDVLVRFGEPLLSRGFDI	241	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	126	24	19	5	0	79.2
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	244	216	28	0	88.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  D  N  Y  A  L  T  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_3007   2    CCCTGTCCCTCACCTGCGCAGCCTCTGGATTTACGTTTGACAACTATGCCTTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  88.5% (216/244)  IGHV3-23*01  50   .....AGA...T....T..............C..C...AG..G.......A...G...................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  S  I  S  G  S  G  S  Y  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_3007   92   GGGTCTCAAGTATTAGTGGTAGTGGAAGTTATACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATTTCCAGGGACAATTCCAAGA  181
V  88.5% (216/244)  IGHV3-23*01  140  ........GC...............TG..AGC......................................C.....A.............  229
                                      W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------------------CDR3
                                      N  T  L  A  L  Q  M  S  S  L  S  A  E  D  T  A  L  Y  Y  C  A  N  A  P  D  V  L  V  R  F  
                    Query_3007   182  ATACCCTGGCTCTGCAAATGAGCAGCCTGAGCGCCGAGGACACGGCCTTATATTACTGTGCGAATGCCCCTGACGTATTAGTCCGGTTCG  271
V  88.5% (216/244)  IGHV3-23*01  230  .C..G...TA...........A.........A...............G................--------------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  85.7% (18/21)    IGHD3-10*01  1    --------------------------------------------------------------------------......C.AT......  16

                                      -IMGT-------------------------->                                  
                                      G  E  P  L  L  S  R  G  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3007   272  GGGAGCCTCTCCTAAGTAGAGGTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  337
D  85.7% (18/21)    IGHD3-10*01  17   .....-------------------------------------------------------------  21
J  100.0% (44/44)   IGHJ3*02     7    ----------------------............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_283439

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           388     5e-110
IGHD2-8*02                                                                                            14.1    9.8   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGGGAATTGAGGGAACTGCGACC	TACTGGT	T	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAATTGAGGGAACTGCGACCTACTGGTTCTACTTTGACCAC	ARGIEGTATYWFYFDH	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	67	4	0	94.4
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	104	10	0	91.2
CDR3-IMGT (germline)	292	295	4	4	0	0	100
Total	N/A	N/A	288	268	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  G  G  V  V  Q  P  G  T  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  
                    Query_3008   8    TGCAGCTGGTGCAGTCTGGGGGAGGCGTGGTCCAACCTGGGACGTCCCTGAGGCTCTCCTGTGCAGCGTCTGGGTTCACCTTCAGTAGCT  97
V  93.1% (268/288)  IGHV3-33*03  5    ...........G......................G.......G.........A....................A................  94
                                         Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      F  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  N  K  K  Y  Y  A  
                    Query_3008   98   TTGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTAGAGTGGGTGGCAGTTATATGGTATGATGGAAATAAAAAATACTATGCAG  187
V  93.1% (268/288)  IGHV3-33*03  95   A..G....................................G...............................G...T.............  184
                                      Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      D  S  V  K  G  R  F  T  F  S  R  D  N  S  K  N  I  L  H  L  Q  M  N  S  L  A  A  E  D  T  
                    Query_3008   188  ACTCCGTGAAGGGCCGATTCACCTTCTCCAGAGACAACTCCAAGAACATCCTACATCTGCAAATGAACAGTTTGGCAGCCGAGGACACGG  277
V  93.1% (268/288)  IGHV3-33*03  185  .......................A........................CG..GT................CC..AG..............  274
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  

                                      -------------><-------------------CDR3-IMGT------------------>                            
                                      A  V  Y  Y  C  A  R  G  I  E  G  T  A  T  Y  W  F  Y  F  D  H  W  G  Q  G  T  V  V  T  V  
                    Query_3008   278  CTGTCTATTACTGTGCGAGGGGAATTGAGGGAACTGCGACCTACTGGTTCTACTTTGACCACTGGGGCCAGGGAACCGTGGTCACCGTCT  367
V  93.1% (268/288)  IGHV3-33*03  275  ....G.............------------------------------------------------------------------------  292
                                      A  V  Y  Y  C  A                                                                          
D  100.0% (7/7)     IGHD2-8*02   10   -----------------------------------------.......------------------------------------------  16
J  95.6% (43/45)    IGHJ4*02     2    -------------------------------------------------..........T.................C............  42

                                          
                                      S  S
                    Query_3008   368  CCTC  371
J  95.6% (43/45)    IGHJ4*02     43   ....  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_344827

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           276     3e-76
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	21	3	6	70
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	215	29	6	86


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  L  G  D  S  G  Y  C  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_3009   4    CCCTGAGACTCTCCTGCGCTGTGTACGGTGGGTCCCTCGGTGACAGTGGTTATTGCTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.0% (215/250)  IGHV4-34*01  50   .....TCC...A..........C..T.........T..------........C.A.....G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_3009   94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.0% (215/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_3009   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.0% (215/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_3009   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_283438

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGCCGG	AGTAGTGGTTATTACT	CTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGCCGGAGTAGTGGTTATTACTCTTACTACTTTGACTAC	ARGRRSSGYYSYYFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	243	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3010   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.6% (243/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3010   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  99.6% (243/244)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  S  S  G  Y  Y  S 
                    Query_3010   181  CAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGTCGCCGGAGTAGTGGTTATTACTCT  270
V  99.6% (243/244)  IGHV4-59*01  229  ...................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (16/16)   IGHD3-22*01  14   ------------------------------------------------------------------------................--  29

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3010   271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_344820

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           372     3e-105
IGHD5-18*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTGAGTGGACGAG	GCTATGG	CCCCCCAAAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTGAGTGGACGAGGCTATGGCCCCCCAAATTACTTTGACTAC	ARGLSGRGYGPPNYFDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	264	26	0	91


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  P  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  R  G  T  F  G  N  Y
                    Query_3011   1    GCAGCTGGTGCCGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTAGAGGCACCTTCGGCAACTA  90
V  91.0% (264/290)  IGHV1-69*01  6    ...........A..........................................................G...........A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  N  W  L  R  Q  A  P  G  Q  G  L  E  W  M  G  E  I  I  P  V  F  T  T  S  N  N  A  Q
                    Query_3011   91   TGCTATCAACTGGCTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGAAATCATCCCTGTCTTTACTACATCAAATAACGCACA  180
V  91.0% (264/290)  IGHV1-69*01  96   ........G....G.......................................GG.........A.....GG....G....CT.......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  P  T  A  D  E  S  T  N  I  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_3011   181  GAAGTTCCAGGGCAGGGTCACTCCTACCGCGGACGAATCCACTAACATTGCCTACATGGAACTGAGCAGCCTGAGATCTGAAGACACGGC  270
V  91.0% (264/290)  IGHV1-69*01  186  ...............A.....GAT..................G.G..CA...........G....................G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  G  L  S  G  R  G  Y  G  P  P  N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_3011   271  CGTCTACTACTGTGCGAGAGGCCTGAGTGGACGAGGCTATGGCCCCCCAAATTACTTTGACTACTGGGGCCAGGGAACACTGGTCACCGT  360
V  91.0% (264/290)  IGHV1-69*01  276  ...G..T.............----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD5-18*01  10   -----------------------------------.......------------------------------------------------  16
J  97.8% (45/46)    IGHJ4*02     3    ----------------------------------------------------..........................C...........  40

                                              
                                        S  S  
                    Query_3011   361  CTCCTCAG  368
J  97.8% (45/46)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_33675

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD3-3*01                                                                                            12.2    31   
IGHJ3*01                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCT	TTACGA	GGGGCTAACTTTTCCTT	TCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCTTTACGAGGGGCTAACTTTTCCTTTC	ARDLYEGLTFPF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3012   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTTCTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  91.0% (223/245)  IGHV4-59*01  49   ..........................................AG.....A........................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  N  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  N  S 
                    Query_3012   91   TGGCTAGGATATATCAATTACACTGGGAGTACCAACTACAATCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAACAGC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A.T..G......T......G......C...........C..................G.........................G.A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  E  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  Y  E  G  L  T  F  P 
                    Query_3012   181  CAATTCTCCCTGGAGTTGTCTTCTGTGACCGCTGCGGACACGGCCGTGTACTATTGTGCGAGAGACCTTTACGAGGGGCTAACTTTTCCT  270
V  91.0% (223/245)  IGHV4-59*01  229  ..G.........A..C..AGC.............................T..C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-3*01   4    --------------------------------------------------------------------......----------------  9

                                      -->                                  
                                       F  W  G  P  G  T  M  V  T  V  S  S  
                    Query_3012   271  TTCTGGGGCCCAGGGACAATGGTCACCGTCTCCTCAG  307
J  94.4% (34/36)    IGHJ3*01     15   -.........A.....................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_344821

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD3-16*01                                                                                           21.8    0.039
IGHJ2*01                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCT	GGGAGTTATGC	CGAT	TTCAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTGGGAGTTATGCCGATTTCAATATC	AAGSYADFNI	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  R  S  Y  D  M  I  W  V  R  Q  A  P  G  K  G  L  
                    Query_3013   1    GGTCCCTGAGACTCTCCTGTGCAGTTTCCGGATTCACCTTTAGAAGCTATGACATGATTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (228/245)  IGHV3-23*01  47   ........................CC..T..............C.......C.....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  A  S  A  I  S  G  N  G  G  S  S  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3013   91   AGTGGGCCTCAGCTATTAGTGGAAATGGTGGTAGTTCATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (228/245)  IGHV3-23*01  137  ......T...............T.G.........CA......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  I  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  A  G  S  Y  A  D  F  N  
                    Query_3013   181  AGAACATTCTGTATTTGCAAATGAACAGCCTGAGGGTCGAGGACACGGCCGTATATTACTGTGCGGCTGGGAGTTATGCCGATTTCAATA  270
V  93.1% (228/245)  IGHV3-23*01  227  ......CG......C...................A.C............................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD3-16*01  20   --------------------------------------------------------------------...........-----------  30
J  88.4% (38/43)    IGHJ2*01     11   -----------------------------------------------------------------------------------...G..C  17

                                      ->                                  
                                      I  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3013   271  TCTGGGGCCGGGGCACGTTGGTCACTGTCTCCTCAG  306
J  88.4% (38/43)    IGHJ2*01     18   ..........T.....CC..................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_344822

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD2-2*02                                                                                            12.2    32    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCA	CTGGTATAC	TTACGTCAGCGGGGGATATG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTGGTATACTTACGTCAGCGGGGGATATGTTGACTAC	ARGHWYTYVSGGYVDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3014   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S 
                    Query_3014   91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGCTACCATATCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ................A.................G................................T......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  W  Y  T  Y  V 
                    Query_3014   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCACTGGTATACTTACGTC  270
V  97.6% (244/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (8/9)      IGHD2-2*02   22   --------------------------------------------------------------------------...C.....-------  30

                                      GT------------------>                                  
                                       S  G  G  Y  V  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_3014   271  AGCGGGGGATATGTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  325
J  97.6% (41/42)    IGHJ4*02     7    -------------.............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_344823

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            276     3e-76
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAGGAC	TAGCACCACCTGG	AGCGGGAACAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGACTAGCACCACCTGGAGCGGGAACATACAACTGGTTCGACCCC	ARLGLAPPGAGTYNWFDP	230	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	17	7	0	70.8
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	19	5	0	79.2
FR3-IMGT	116	229	114	105	9	0	92.1
CDR3-IMGT (germline)	230	235	6	6	0	0	100
Total	N/A	N/A	222	199	23	0	89.6


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  L  R  F  S  S  I  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  H  I  N  Q  D 
                    Query_3015   14   TCTGGACTCAGGTTCAGTAGTATTTGGATGAGCTGGGTCCGCCAGGCTCCTGGGAAGGGGCTGGAGTGGGTGGCCCACATAAATCAAGAT  103
V  89.6% (199/222)  IGHV3-7*01   73   ......T...CC..T.....CTA...........................A........................A.......G......  162
                                       S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  K  Q  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       A  S  D  H  Y  Y  L  D  S  V  K  G  R  F  T  V  S  R  D  N  A  K  S  S  V  F  L  Q  M  N 
                    Query_3015   104  GCAAGTGACCACTACTATCTGGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCAAGAGTTCAGTGTTTCTGCAAATGAAC  193
V  89.6% (199/222)  IGHV3-7*01   163  .G......GA.A......G..........................A.....................AC...C...A.............  252
                                       G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><----------------------CDR3-IMGT--------------------->
                                       S  L  T  A  E  D  T  A  V  Y  Y  C  A  R  L  G  L  A  P  P  G  A  G  T  Y  N  W  F  D  P 
                    Query_3015   194  AGCCTGACAGCCGAAGACACGGCTGTTTATTACTGTGCGAGACTAGGACTAGCACCACCTGGAGCGGGAACATACAACTGGTTCGACCCC  283
V  89.6% (199/222)  IGHV3-7*01   253  .......G......G...........G...............------------------------------------------------  294
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  84.6% (11/13)    IGHD6-13*01  6    -------------------------------------------------.....G..G....----------------------------  18
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------.................  17

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3015   284  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  317
J  100.0% (51/51)   IGHJ5*02     18   ..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_293861

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-66*04                                                                                           277     9e-77
IGHD3-10*02                                                                                           10.3    116  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-66*04	IGHD3-10*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	GGAGATGGCCTCA	ATGTT	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAGGAGATGGCCTCAATGTTCTTTGACTAC	VRQEMASMFFDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	96	18	0	84.2
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	247	212	35	0	85.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  L  K  V  S  I  N  D  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3016   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTAAAAGTCAGTATAAATGACATGAGTTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  85.8% (212/247)  IGHV3-66*04  47   ....................G.............C.CC.......GC..CT.......C..............T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  A  L  I  Y  S  D  G  R  T  H  Y  A  D  S  V  K  G  R  I  T  L  S  R  D  T  S  K  
                    Query_3016   91   AGTGGGTCGCACTTATCTATAGCGATGGCAGAACACACTACGCAGACTCCGTCAAGGGCCGAATCACCCTCTCCAGAGACACGTCCAAGA  180
V  85.8% (212/247)  IGHV3-66*04  137  ........T..G....T.......G...T..C...T................G......A..T.....A............AT.......  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  L  Y  Y  C  V  R  Q  E  M  A  S  M  F  F  
                    Query_3016   181  ACACCTTATATCTTCAAATGAACAGCCTGCGAGTCGACGACACTGCCCTATATTATTGTGTGAGACAGGAGATGGCCTCAATGTTCTTTG  270
V  85.8% (212/247)  IGHV3-66*04  227  ....GC.G.....................A...C...G.....G..TG.G.....C....C......-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (5/5)     IGHD3-10*02  9    --------------------------------------------------------------------------------.....-----  13
J  100.0% (44/44)   IGHJ4*02     5    -------------------------------------------------------------------------------------.....  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3016   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (44/44)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_62402

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           344     6e-97
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACGATGC	CTACGGT	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATGACGATGCCTACGGTCTTGACTAC	VRDDDAYGLDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3017   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3017   91   AGTGGGTGGCAGTTATTTGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-33*01  137  ................A....................................................................TT...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  I  L  Y  L  Q  M  N  S  L  S  A  D  D  T  A  V  Y  Y  C  V  R  D  D  D  A  Y  G  L  
                    Query_3017   181  AGAACATTCTGTATTTGCAAATGAACAGTCTGAGTGCCGACGACACGGCTGTCTATTACTGTGTAAGAGATGACGATGCCTACGGTCTTG  270
V  94.0% (235/250)  IGHV3-33*01  227  ......CG......C.............C.....A.....G...........G..........CG.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD4-17*01  4    -------------------------------------------------------------------------------.......----  10
J  95.2% (40/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  L  S  S  
                    Query_3017   271  ACTACTGGGGCCAGGGGACCCTGGTCACCCTCTCCTCAG  309
J  95.2% (40/42)    IGHJ4*02     10   ................A............G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_62403

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           311     4e-87
IGHD1-26*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCG	TAGAGGGAGC	AACAGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCGTAGAGGGAGCAACAGTTTTTGACTAC	AKVVEGATVFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	224	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3018   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGGCAGTTATGCCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.0% (224/249)  IGHV3-23*01  47   .........................................A....C..........GC..........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  S  N  K  G  R  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3018   91   AGTGGGTGGCGGGTATCAGTAACAAAGGTCGGAACACATATTACGCAGACTCCGTGAAGGGCCGGTTCACCATTTCCAGAGACAATTCCG  180
V  90.0% (224/249)  IGHV3-23*01  137  .......CT.A.C...T...GGT.GT...G.T.G......C................................C...............A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      E  K  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  V  V  E  G  A  T  V  
                    Query_3018   181  AGAAGACGCTATATCTCCAAATGAACAGTCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTCGTAGAGGGAGCAACAGTTT  270
V  90.0% (224/249)  IGHV3-23*01  227  ....C.....G.....G...........C........................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (9/10)     IGHD1-26*01  5    ------------------------------------------------------------------------...T......--------  14
J  97.7% (42/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_3018   271  TTGACTACTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  312
J  97.7% (42/43)    IGHJ4*02     7    .............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_62400

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            319     2e-89
IGHD3-10*01                                                                                           39.1    3e-07
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAAAAAGG	TTACTATGGTTCGGGGAGTT	CCCCCCTCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAAAAAGGTTACTATGGTTCGGGGAGTTCCCCCCTCCACTACTTCTATCACGCTCTGGGCGTC	ARDQKGYYGSGSSPLHYFYHALGV	232	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	10	1	0	90.9
CDR1-IMGT	19	42	24	20	4	0	83.3
FR2-IMGT	43	93	51	50	1	0	98
CDR2-IMGT	94	117	24	20	4	0	83.3
FR3-IMGT	118	231	114	110	4	0	96.5
CDR3-IMGT (germline)	232	239	8	8	0	0	100
Total	N/A	N/A	232	218	14	0	94


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  I  T  N  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  
                    Query_3019   8    GTGCAGTCTCTGGATTCACCATTACTAACTTTTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAA  97
V  94.0% (218/232)  IGHV3-7*01   65   ......C.............T...G..G..A.........C.................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      K  E  N  G  N  E  R  Y  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_3019   98   AGGAAAATGGAAATGAGAGATACTATGTGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCTCTGTATCTGC  187
V  94.0% (218/232)  IGHV3-7*01   155  ..C..G......G.....A....................A.......................................A..........  244
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-------------------------------CDR3-IMGT-----
                                      Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Q  K  G  Y  Y  G  S  G  S  S  P  L  
                    Query_3019   188  AATTGAACAGCCTGAGAGCCGAGGACACCGCTGTGTATTACTGTGCGAGAGATCAAAAAGGTTACTATGGTTCGGGGAGTTCCCCCCTCC  277
V  94.0% (218/232)  IGHV3-7*01   245  ..A.........................G.......................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (20/20)   IGHD3-10*01  4    -------------------------------------------------------------....................---------  23

                                      ------------------------->                                 
                                      H  Y  F  Y  H  A  L  G  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3019   278  ACTACTTCTATCACGCTCTGGGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  336
J  89.8% (53/59)    IGHJ6*02     4    ......A...CT...G.A...A.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_62401

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            336     1e-94
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGGGAACTTCGGA	ATTTTTGGAGTGGT	GCATACCAAGGGGC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGGGAACTTCGGAATTTTTGGAGTGGTGCATACCAAGGGGCTATGGACGTC	ARVGELRNFWSGAYQGAMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  K  F  T  F  R  N  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3020  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTAAATTCACCTTTAGAAACTATTGGATGAATTGGGTCCGGCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-7*03  47   .............................GG............T.G...........GC........C......................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  E  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3020  91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGAGAAATACTATGTCGACTCTGTGAAGGGCCGATTCACCATTTCTAGAGACAACGCCA  180
V  93.2% (232/249)  IGHV3-7*03  137  ....................C.........................G..........................C..C.............  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------------CD
                                     K  S  S  L  L  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  E  L  R  N  F  
                    Query_3020  181  AGAGCTCACTACTTCTCCAAATGAACACCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGTAGGGGAACTTCGGAATTTTT  270
V  93.2% (232/249)  IGHV3-7*03  227  ...A......GTA...G..........G.........................................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD3-3*01  9    ------------------------------------------------------------------------------------......  14

                                     R3-IMGT------------------------>                                 
                                     W  S  G  A  Y  Q  G  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3020  271  GGAGTGGTGCATACCAAGGGGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  100.0% (14/14)   IGHD3-3*01  15   ........---------------------------------------------------------  22
J  100.0% (43/43)   IGHJ6*02    20   ----------------------...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_62406

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-10*01                                                                                           33.4    1e-05
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TCAGACGAG	GGTTCGGGGAGTTATTA	ATGGTGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATCAGACGAGGGTTCGGGGAGTTATTAATGGTGTTTTTGATGTC	ARDQTRVRGVINGVFDV	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  A  S  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3021   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGCTTCACACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   ..............................................G.GGTT......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  W  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  V  I  S  V  D  T  S 
                    Query_3021   91   CTGGAGTGGATTGGGTACATCTGGCACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTGTCATATCAGTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ......................ATT............................................AC...................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       Q  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  D  Q  T  R  V  R  G 
                    Query_3021   181  CAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCCTGTATTACTGTGCGAGGGATCAGACGAGGGTTCGGGGA  270
V  94.4% (237/251)  IGHV4-31*03  229  A..................A...............................G................A..-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (17/17)   IGHD3-10*01  11   --------------------------------------------------------------------------------..........  20

                                      MGT-------------------->                                  
                                       V  I  N  G  V  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3021   271  GTTATTAATGGTGTTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  328
D  100.0% (17/17)   IGHD3-10*01  21   .......---------------------------------------------------  27
J  100.0% (44/44)   IGHJ3*01     7    --------------............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_62407

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           350     8e-99
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATCGTGGTG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATCGTGGTGACTACTTTGACCAC	ARGLHYYDRGDYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  R  V  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3022   1    ACCCTGTCCCTCACCTGCACTGTCTCTCGTGTCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*03  49   ...........................G...G...................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_3022   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAATAAGTCCCTCAAGAGTCGAATTACCATATCGGTAGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*03  139  ..................................G............CCC................G..........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  A  Y  Y  C  A  R  G  L  H  Y  Y  D  R 
                    Query_3022   181  AAGAACCAGTTCTCCCTGACGCTGACCTCTGTGACTGCCGCGGACACGGCCGCCTATTACTGTGCGAGAGGCCTCCATTACTATGATCGT  270
V  94.8% (237/250)  IGHV4-31*03  229  ...................A.....G..........................TG................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (16/18)    IGHD3-22*01  3    ----------------------------------------------------------------------------...........A..  16

                                      ----------------->                                  
                                       G  D  Y  F  D  H  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_3022   271  GGTGACTACTTTGACCACTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  322
D  88.9% (16/18)    IGHD3-22*01  17   A...------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    ----...........T....................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_62404

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           363     1e-102
IGHD3-10*01                                                                                           10.3    121   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	CGGGG	GCCGGGGGGGGGGGGTCGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACGGGGGCCGGGGGGGGGGGGTCGGCCTTTGACTAC	AKDGGRGGGVGL*L	243	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3023   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCAGCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-23*01  47   ........................................T.................C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  G  N  T  Y  Y  P  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3023   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAACACATACTACCCAGACTCCGTGAAGGGCCGGTTTACCATCTCCAGAGACAATTCCA  180
V  96.4% (241/250)  IGHV3-23*01  137  .................................G..........G......................C......................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  T  L  R  V  E  D  T  A  V  Y  Y  C  A  K  D  G  G  R  G  G  G  
                    Query_3023   181  AGAACACGCTGTATCTCCAAATGAACACACTGAGAGTCGAGGACACGGCCGTATATTACTGTGCGAAAGACGGGGGCCGGGGGGGGGGGG  270
V  96.4% (241/250)  IGHV3-23*01  227  ................G..........GC.......C.................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD3-10*01  15   ----------------------------------------------------------------------.....---------------  19

                                      -------------->                                  
                                      V  G  L  *  L  L  G  P  G  N  P  D  Q  C  L  L   
                    Query_3023   271  TCGGCCTTTGACTACTGGGGCCAGGGAACCCTGATCAGTGTCTCCTCAG  319
J  93.2% (41/44)    IGHJ4*02     5    -----............................G...CC..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_62405

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            327     9e-92
IGHD3-3*02                                                                                            12.2    31   
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTT	GCATTT	CGATCTCCCACGAGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGCATTTCGATCTCCCACGAGGCATGGACGTC	ARLHFDLPRGMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  V  S  G  G  S  T  T  S  T  Y  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_3024  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGGGGCTCCACCACCAGTACTTACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  92.7% (227/245)  IGHV4-4*01  49   ..................G....C.....T.......T..G.....G.A.........G...........................G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  S  G  S  P  H  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_3024  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCCCCCACTACAGTCCGTCCCTCAAGAGTCGGGTCACCATATCAGTAGACAAGTCCAAG  180
V  92.7% (227/245)  IGHV4-4*01  139  .................................A..A......AC.................A...........................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                      N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  W  C  A  R  L  H  F  D  L  P  R  G 
                    Query_3024  181  AACCAGTTCTCCCTGAAGTTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTGGTGTGCGAGGTTGCATTTCGATCTCCCACGAGGC  270
V  92.7% (227/245)  IGHV4-4*01  229  ..................C....C.............................T..C........-------------------------  293
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  100.0% (6/6)     IGHD3-3*02  7    --------------------------------------------------------------------......----------------  12

                                     -------->                              
                                      M  D  V  W  G  Q  G  T  T  A  I  V  S 
                    Query_3024  271  ATGGACGTCTGGGGCCAAGGGACCACGGCCATCGTCTCC  309
J  94.9% (37/39)    IGHJ6*02    21   ............................T..C.......  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_62408

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           441     6e-126
IGHD3-16*02                                                                                           19.9    0.18  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TTATCGTTAT	GGCATCAGGTGGTTACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTATCGTTATGGCATCAGGTGGTTACCACTTTGACTTC	ARLIVMASGGYHFDF	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	74	0	0	100
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	111	3	0	97.4
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	294	288	6	0	98


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  N  F  T  
                    Query_3025   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAACTTTACCA  91
V  98.0% (288/294)  IGHV5-51*01  2    .................................................................................G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  F  D  T  R  Y  
                    Query_3025   92   CCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTTTGATACCAGATATA  181
V  98.0% (288/294)  IGHV5-51*01  92   G..........................................................................C............C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_3025   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  98.0% (288/294)  IGHV5-51*01  182  .........................................................A................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  I  Y  Y  C  A  R  L  I  V  M  A  S  G  G  Y  H  F  D  F  W  G  Q  G  T  L  V  T  V  
                    Query_3025   272  CCGCCATCTATTACTGTGCGAGACTTATCGTTATGGCATCAGGTGGTTACCACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCT  361
V  98.0% (288/294)  IGHV5-51*01  272  .......G................------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD3-16*02  25   ------------------------..........--------------------------------------------------------  34
J  97.8% (44/45)    IGHJ4*02     4    ---------------------------------------------------.........A.............................  42

                                            
                                      S  S  
                    Query_3025   362  CCTCAG  367
J  97.8% (44/45)    IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_62409

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	291	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	70	4	0	94.6
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	295	5	5	0	0	100
Total	N/A	N/A	292	276	16	0	94.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  
                    Query_3026   4    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCA  93
V  94.5% (276/292)  IGHV5-51*01  2    ....G........G...................................................A...G............C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  H  W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  
                    Query_3026   94   CCCACTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACA  183
V  94.5% (276/292)  IGHV5-51*01  92   G.T......................G.T..........................G..............G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  
                    Query_3026   184  GCCCGTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACA  273
V  94.5% (276/292)  IGHV5-51*01  182  ...................G.........................T.........................A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------CDR3-IMGT--------->                                 
                                      T  A  I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3026   274  CCGCCATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  353
V  94.5% (276/292)  IGHV5-51*01  272  .......G..T...........----------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ----------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_240606

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           310     1e-86
IGHD2-15*01                                                                                           21.8    0.039
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AAAGTCT	GATATTGTAGT	CCC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGTCTGATATTGTAGTCCCTATGGACGTC	AKSDIVVPMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  T  H  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3027   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTTACTCACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.6% (221/244)  IGHV3-21*01  47   ....................................CC..C.G.AG....A.C....A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  V  G  T  Y  I  E  Y  A  S  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_3027   91   AGTGGGTCTCGTACATTTCTAGTGTTGGTACTTACATAGAGTACGCAAGCTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  90.6% (221/244)  IGHV3-21*01  137  ..........A.C....AG....AG.A...G.......T.C......GA......................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  S  D  I  V  V  P  M  
                    Query_3027   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGCAAAGTCTGATATTGTAGTCCCTATGG  270
V  90.6% (221/244)  IGHV3-21*01  227  .........................................................A......--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD2-15*01  3    -----------------------------------------------------------------------...........--------  13
J  100.0% (43/43)   IGHJ6*02     20   -------------------------------------------------------------------------------------.....  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3027   271  ACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  308
J  100.0% (43/43)   IGHJ6*02     25   ......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_26451

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         433     1e-123
IGHD1-7*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCGTCC	GTATGACTGGAACTAC	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCGTCCGTATGACTGGAACTACCCCTTTGACTAC	ARHRPYDWNYPFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  E  Y  S  F  T  S  Y
                    Query_3028     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGAATCTCCTGTAAGGGTTCTGAATACAGCTTTACCAGCTA  90
V  97.9% (283/289)  IGHV5-10-1*01  6    ...................................................G...................G..................  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_3028     91   CTGGATCAGCTGGGTGCGTCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  97.9% (283/289)  IGHV5-10-1*01  96   ..................C.......................................................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  T  D  K  S  I  N  T  A  Y  V  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3028     181  GTCCTTCCAAGGCCACGTCACCATCTCAACTGACAAGTCCATCAACACTGCCTACGTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (283/289)  IGHV5-10-1*01  186  ............................G...............G..........C..................................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------CDR3-IMGT--------------->                                  
                                          M  Y  Y  C  A  R  H  R  P  Y  D  W  N  Y  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3028     271  CATGTATTACTGTGCGAGACATCGTCCGTATGACTGGAACTACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  97.9% (283/289)  IGHV5-10-1*01  276  ...................----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                       
D  93.8% (15/16)    IGHD1-7*01     2    ---------------------------....A...........----------------------------------------------  17
J  100.0% (44/44)   IGHJ4*02       5    ---------------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_26450

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            333     1e-93
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TAGAGAGGTCCGCATTGA	TAGTGCTTATTAC	GAGGGACCTCC	TGACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAGAGAGGTCCGCATTGATAGTGCTTATTACGAGGGACCTCCTGACAAC	ASREVRIDSAYYEGPPDN	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  D  H  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_3029   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTGATCACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.5% (229/245)  IGHV4-4*02   49   ..................G............G.............AG.A.........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  T  G  S  T  N  Y  N  P  S  L  G  G  R  V  S  I  S  V  D  K  S  K 
                    Query_3029   91   GAGTGGATAGGGGAAATCTACCATACTGGGAGCACCAACTACAACCCGTCCCTCGGGGGTCGAGTCTCCATATCAGTAGACAAGTCCAAG  180
V  93.5% (229/245)  IGHV4-4*02   139  ........T...........T....G............................AA.A........A.......................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                       N  Q  F  S  L  I  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  V  R  I  D  S  A 
                    Query_3029   181  AACCAGTTCTCCCTGATACTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGTAGAGAGGTCCGCATTGATAGTGCT  270
V  93.5% (229/245)  IGHV4-4*02   229  ................AG.....C.........................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  92.3% (12/13)    IGHD3-22*01  16   -----------------------------------------------------------------------------------.....G.  22

                                      GT--------------------->                                  
                                       Y  Y  E  G  P  P  D  N  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_3029   271  TATTACGAGGGACCTCCTGACAACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  328
D  92.3% (12/13)    IGHD3-22*01  23   ......----------------------------------------------------  28
J  95.1% (39/41)    IGHJ4*02     8    -----------------....T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_26453

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD3-22*01                                                                                           21.8    0.041
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCGTAAAGGG	GGTTATTACTA	T	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCGTAAAGGGGGTTATTACTATCTACTACTACTACAATATGGACGTC	ARTVKGVITIYYYYNMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	231	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3030   1    ACCCTGTCCCTCACCTGCGCCGTCTATGGTGGGTCTTTCAGTGGTTACTACTGGACTTGGATCCGCCAACCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (231/243)  IGHV4-34*01  49   ....................T..............C...................GC...........G.....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  L  S  G  R  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_3030   91   TGGATTGGCGAAATCAATCTTAGTGGAAGAACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAT  180
V  95.1% (231/243)  IGHV4-34*01  139  ........G..........A.........C..........................................G................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  I  Y 
                    Query_3030   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAACCGTAAAGGGGGTTATTACTATCTAC  270
V  95.1% (231/243)  IGHV4-34*01  229  .............A.................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (11/11)   IGHD3-22*01  20   --------------------------------------------------------------------------...........-----  30
J  96.6% (56/58)    IGHJ6*02     5    --------------------------------------------------------------------------------------....  8

                                      -------------------->                                 
                                       Y  Y  Y  N  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3030   271  TACTACTACAATATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  96.6% (56/58)    IGHJ6*02     9    .........GG...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_26452

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           311     4e-87
IGHD2-21*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGGGGG	ATTGTGATGGT	ATTAACTGCTTCCCCTGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGGATTGTGATGGTATTAACTGCTTCCCCTGGTACTACTATTATGGAATGCACGTC	AKGDCDGINCFPWYYYYGMHV	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	220	21	0	91.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  L  Y  G  G  S  F  S  G  H  Y  W  I  W  L  R  Q  S  P  G  K  G  L  E 
                    Query_3031   1    ACCCTGTCCCTCACCTGCGCTCTCTATGGTGGGTCCTTCAGTGGTCACTACTGGATTTGGCTCCGCCAGTCCCCCGGGAAGGGGCTGGAG  90
V  91.3% (220/241)  IGHV4-34*01  49   .....................G.......................T.........GC...A........C....A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  K  Y  N  S  S  L  K  S  R  V  A  M  S  I  D  A  S  K  S 
                    Query_3031   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACGAAGTACAACTCGTCCCTCAAGAGCCGAGTCGCCATGTCAATAGACGCGTCCAAGAGT  180
V  91.3% (220/241)  IGHV4-34*01  139  ................................C..C......C.............T......A....A...G.....A.........AC  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  Y  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  G  D  C  D  G  I  N  C  F 
                    Query_3031   181  CAATTCTACCTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAAGGGGGATTGTGATGGTATTAACTGCTTC  270
V  91.3% (220/241)  IGHV4-34*01  229  ..G....C...........G...........................G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (10/11)    IGHD2-21*01  6    -------------------------------------------------------------------......G....------------  16

                                      MGT-------------------------->                                 
                                       P  W  Y  Y  Y  Y  G  M  H  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_3031   271  CCCTGGTACTACTATTATGGAATGCACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  333
J  91.2% (52/57)    IGHJ6*02     6    ------........C..C..T...G...........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_26455

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           318     6e-89
IGHD2-15*01                                                                                           14.1    9.2  
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TGT	CTACTCC	ACATGAATCCGGGGGTCCCCCCGACAGACGGCGAATTCGGACCCAATAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTGTCTACTCCACATGAATCCGGGGGTCCCCCCGACAGACGGCGAATTCGGACCCAATATTTTGACTCT	AKVSTPHESGGPPDRRRIRTQYFDS	243	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  A  L  T  W  V  R  Q  A  P  G  R  G  L  
                    Query_3032   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACGTTTAGTAGCTACGCCCTGACCTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  90.8% (226/249)  IGHV3-23*01  47   .....................C...............C.....C.....T...A...G.......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  D  I  T  S  S  S  D  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3032   91   AATGGGTCTCAGATATTACTTCTAGTAGTGATAGTACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCTA  180
V  90.8% (226/249)  IGHV3-23*01  137  .G..........C.....G.GG....G...G...C.....................................................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  V  Y  L  Q  M  K  S  L  R  G  E  D  T  A  V  Y  Y  C  A  K  V  S  T  P  H  E  S  
                    Query_3032   181  AGAACACAGTGTATCTGCAAATGAAAAGCCTGAGAGGCGAGGACACAGCCGTTTACTACTGTGCGAAAGTGTCTACTCCACATGAATCCG  270
V  90.8% (226/249)  IGHV3-23*01  227  .......GC................C..........C.........G.....A..T.............---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD2-15*01  25   ------------------------------------------------------------------------.......-----------  31

                                      -----CDR3-IMGT-------------------------------->                                  
                                      G  G  P  P  D  R  R  R  I  R  T  Q  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3032   271  GGGGTCCCCCCGACAGACGGCGAATTCGGACCCAATATTTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  351
J  95.3% (41/43)    IGHJ4*02     6    --------------------------------------.......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_240723

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         353     1e-99
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GC	TACTATGATAGTAGTGGTT	CCTACCTTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGCTACTATGATAGTAGTGGTTCCTACCTTAACTACTTTGACTAC	ARGYYDSSGSYLNYFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  V  S  I  G  S  G  G  H  Y  W  N  W  I  R  Q  P  P  G  K  G 
                    Query_3033     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGTCTCCATCGGCAGTGGTGGTCACTACTGGAATTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  95.2% (238/250)  IGHV4-30-4*01  49   ..................A............G.......A.........A.T.........G............................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3033     91   CTGGAGTGGATTGGGAACATCTATTACAGTGGGAGTACATACTACAACCCGTCCCTCAAGAGTCGAGTTACCATTTCAGTAGACACGTCC  180
V  95.2% (238/250)  IGHV4-30-4*01  139  ...............T...................C..C...................................A...............  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  Y  Y  D  S  S  G 
                    Query_3033     181  AAGAACCACTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTCTATTACTGTGCCAGAGGCTACTATGATAGTAGTGGT  270
V  95.2% (238/250)  IGHV4-30-4*01  229  ........G............................................G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (19/19)   IGHD3-22*01    5    ------------------------------------------------------------------------..................  22

                                        MGT-------------------->                                  
                                         S  Y  L  N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3033     271  TCCTACCTTAACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  100.0% (19/19)   IGHD3-22*01    23   .---------------------------------------------------------  23
J  100.0% (48/48)   IGHJ4*02       1    ----------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_70812

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           382     4e-108
IGHD3-10*01                                                                                           12.2    35    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCCAGC	GGGAGT	GAAAAGTTAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGCAGATCCAGCGGGAGTGAAAAGTTAATTGACTCT	GRSSGSEKLIDS	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	4	2	0	66.7
Total	N/A	N/A	288	266	22	0	92.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  E  A  S  G  Y  T  F  S  N  Y 
                    Query_3034   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAAGTCTCCTGCGAGGCTTCTGGTTACACCTTTAGCAACTAC  91
V  92.4% (266/288)  IGHV1-18*04  7    ..................................................G.........A.....................C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       E  I  S  W  V  R  Q  A  R  G  Q  G  L  E  W  M  G  C  I  S  G  Y  S  G  D  T  E  Y  A  Y 
                    Query_3034   92   GAAATCAGCTGGGTGCGACAGGCCCGTGGACAAGGGCTTGAGTGGATGGGATGCATCAGCGGTTACAGTGGTGACACAGAGTATGCATAC  181
V  92.4% (266/288)  IGHV1-18*04  97   .GT......................C...........................G.......C.....A....A.....A.C......C.G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       Q  F  R  G  R  V  T  M  T  T  D  T  S  A  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3034   182  CAATTCCGGGGCAGAGTCACCATGACCACAGACACATCCGCGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.4% (266/288)  IGHV1-18*04  187  A.GC...A...............................A..................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  G  R  S  S  G  S  E  K  L  I  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3034   272  GTGTATTACTGTGGCAGATCCAGCGGGAGTGAAAAGTTAATTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.4% (266/288)  IGHV1-18*04  277  .............CG...----------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD3-10*01  17   ------------------------......----------------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    ----------------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_26456

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           397     8e-113
IGHD2-21*02                                                                                           16.1    2.5   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TTTG	GGTGATGACTG	GGATCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTTTGGGTGATGACTGGGATCAATACTACTTTGACTAC	ASLGDDWDQYYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	271	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  T  G  E  S  L  K  I  S  C  R  C  S  G  Y  R  F  T  N  Y
                    Query_3035   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGACCGGGGAGTCTCTGAAGATCTCCTGTAGGTGTTCTGGATACAGGTTTACCAATTA  90
V  94.1% (271/288)  IGHV5-51*01  6    ..................................C...........................A.G.............C.......GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  M  G  M  M  N  P  G  D  S  D  T  R  Y  S  P
                    Query_3035   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACATGGGAATGATGAATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  94.1% (271/288)  IGHV5-51*01  96   ........G...................................GG.....G..C..CT...............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  G  Q  V  T  I  S  A  D  E  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_3035   181  GCCCTTCCAAGGCCAGGTCACCATCTCAGCCGACGAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  94.1% (271/288)  IGHV5-51*01  186  .T................................A..........C...........................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  S  L  G  D  D  W  D  Q  Y  Y  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_3035   271  CATGTATTACTGTGCGAGTTTGGGTGATGACTGGGATCAATACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  359
V  94.1% (271/288)  IGHV5-51*01  276  ..................-----------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                          
D  90.9% (10/11)    IGHD2-21*02  11   ----------------------....G......--------------------------------------------------------  21
J  97.9% (47/48)    IGHJ4*02     1    -----------------------------------------...................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_26458

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD2-15*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGT	GGATATTGTAGTGG	CTTTGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTGGATATTGTAGTGGCTTTGGTTGACTCC	AKDVDIVVALVDS	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  C  Q  A  P  G  K  G  L  
                    Query_3036   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAATTATGCCATGAGCTGGGTCTGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   .............................................GC..................C........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  L  T  T  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  Q  S  
                    Query_3036   91   AGTGGGTCTCAGGTATTAGTGGTAGTGGTCTTACCACATACTACGCAGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGATCAATCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  ............C................GG..G......................A.......G.................CA.T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  V  D  I  V  V  A  
                    Query_3036   181  AGAACACCCTGTATCTGCAAATGAGCAGCCTGAGGGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATGTGGATATTGTAGTGGCTT  270
V  94.0% (235/250)  IGHV3-23*01  227  .......G................A.........A...................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (14/14)   IGHD2-15*01  2    -------------------------------------------------------------------------..............---  15

                                      ---------->                                  
                                      L  V  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3036   271  TGGTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ4*02     7    ---......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_77329

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD3-10*01                                                                                           43.0    2e-08
IGHJ5*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAC	TTACTATGGGTCGGGGAGTTTTTATAAC	TCCCCGT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATACTTACTATGGGTCGGGGAGTTTTTATAACTCCCCGTACTGGTTTGACTCC	AKDTYYGSGSFYNSPYWFDS	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  A  M  N  W  V  R  Q  V  P  G  K  G  L  
                    Query_3037   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACACCTATGCCATGAACTGGGTCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-23*01  47   ..........................................G..G...........G..............C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  M  S  G  H  G  G  I  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3037   91   AGTGGGTCTCAGGCATGAGTGGTCATGGTGGTATCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-23*01  137  ............CT..T......AG........G....T...................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  S  T  L  Y  L  V  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  T  Y  Y  G  S  G  
                    Query_3037   181  AGAGCACGCTCTACCTGGTCATGAATAGCCTGAGAGCCGAGGACACGGCCGTTTACTACTGTGCGAAAGATACTTACTATGGGTCGGGGA  270
V  92.0% (230/250)  IGHV3-23*01  227  ...A......G..T...CAA.....C..........................A..T..............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.9% (26/28)    IGHD3-10*01  4    -------------------------------------------------------------------------.........T.......  20

                                      R3-IMGT------------------------>                                  
                                      S  F  Y  N  S  P  Y  W  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3037   271  GTTTTTATAACTCCCCGTACTGGTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  92.9% (26/28)    IGHD3-10*01  21   ...A.......-------------------------------------------------------  31
J  95.8% (46/48)    IGHJ5*01     4    ------------------.......C..............A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_77328

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           315     5e-88
IGHD3-9*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TTCAAGGAGTGTCCGGCAC	CTGGTTATT	TGATTATTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTCAAGGAGTGTCCGGCACCTGGTTATTTGATTATTATGACTAC	VQGVSGTWLFDYYDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3038   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTCAGCAATTATGGCATGCACTGGGTCCGTCAGGCTCCAGGCAAGGGGCTGG  90
V  91.4% (222/243)  IGHV3-30*03  47   .....................C.....................T.GC....................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  N  D  G  R  I  N  D  Y  V  D  S  A  R  G  R  F  T  I  S  R  D  N  S  
                    Query_3038   91   AGTGGTTGGCAGTGATATCAAATGATGGACGTATTAACGACTATGTTGACTCCGCGAGGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  91.4% (222/243)  IGHV3-30*03  137  .....G.......T......T........A...A...AT......CA.......T..A................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  F  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  Q  G  V  S  G  T  W  L  
                    Query_3038   181  AGAACACACTGTTTCTGCAAATGAGCAGCCTGAGAGCTGAAGACACGGCTGTCTATTACTGTGTTCAAGGAGTGTCCGGCACCTGGTTAT  270
V  91.4% (222/243)  IGHV3-30*03  227  .......G....A...........A...............G...........G..........---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (9/9)     IGHD3-9*01   18   ----------------------------------------------------------------------------------........  25

                                      ---------------->                                
                                      F  D  Y  Y  D  Y  W  G  Q  G  T  L  V  I  V  S  S
                    Query_3038   271  TTGATTATTATGACTACTGGGGCCAGGGAACCCTGGTCATTGTCTCCTC  319
D  100.0% (9/9)     IGHD3-9*01   26   .------------------------------------------------  26
J  94.9% (37/39)    IGHJ4*02     8    ----------.............................CC........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_155724

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            355     3e-100
IGHD3-10*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              60.3    2e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTACCATGGTTCGGGG	GGTATTGCTGATGAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTACCATGGTTCGGGGGGTATTGCTGATGAT	ARGDYHGSGGIADD	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  Y  D  Y  A  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_3039   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCTATGATTATGCCATGCACTGGGTCCGGCAAGTTCCAGGGAAGGGCCTGG  90
V  95.6% (238/249)  IGHV3-9*01   47   ........................................TG..............................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  S  W  N  S  V  N  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3039   91   AGTGGGTCGCTGCTATTAGTTGGAATAGTGTTAATATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (238/249)  IGHV3-9*01   137  ........T.A.G.................G..GC.......................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  G  D  Y  H  G  S  G  
                    Query_3039   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCGAGAGGAGATTACCATGGTTCGGGGG  270
V  95.6% (238/249)  IGHV3-9*01   227  ................................................................A.A..---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  94.1% (16/17)    IGHD3-10*01  3    ------------------------------------------------------------------------.....T...........-  19

                                      ------------->                                  
                                      G  I  A  D  D  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_3039   271  GTATTGCTGATGATTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  318
J  97.1% (33/34)    IGHJ4*02     15   --------------......................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_155723

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           343     2e-96
IGHD3-10*01                                                                                           10.3    118  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACA	GGGGA	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACAGGGGATACTACGGTATGGACGTC	ARDDRGYYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  S  S  G  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_3040   1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCCCCATCAGCAGTGGTGGTTATTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  93.6% (235/251)  IGHV4-31*03  49   ....................T............T...................C.A.....G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  H  Y  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S 
                    Query_3040   91   CTGGAGTGGATTGGGAACATCCATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTAGACACGTCT  180
V  93.6% (235/251)  IGHV4-31*03  139  ...............T.....T...................C.................G........T.....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  E  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  D  D  R  G  Y  Y  G 
                    Query_3040   181  AAGAACCAGTTCTCCCTGGAGCTGACCTCTATGACAGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGATGACAGGGGATACTACGGT  270
V  93.6% (235/251)  IGHV4-31*03  229  ..................A......G....G....T.................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------------.....---------  20
J  96.0% (48/50)    IGHJ6*02     12   ---------------------------------------------------------------------------------.........  20

                                      -------->                                
                                       M  D  V  W  G  Q  G  I  T  V  T  V  S  S
                    Query_3040   271  ATGGACGTCTGGGGCCAAGGGATTACGGTCACCGTCTCCTC  311
J  96.0% (48/50)    IGHJ6*02     21   ......................CC.................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_155722

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	217	28	0	88.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_3041   1    ACCCTGTCCCTCACCTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  88.6% (217/245)  IGHV4-34*01  49   .......................CTA..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  T  R  Y  N  S  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_3041   91   TGGATTGGGGAAATCAGTCATAGTGGAAGTACGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAA  180
V  88.6% (217/245)  IGHV4-34*01  139  ................A............C..C.AC......C..T......A...............A....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  V  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W 
                    Query_3041   181  CAAGTCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCTGGCGAAGACAGCGCAACTGG  270
V  88.6% (217/245)  IGHV4-34*01  229  ..GT...........C..A......T.....................G.....C......A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (49/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------.......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3041   271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (49/50)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_343478

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           416     2e-118
IGHD3-16*01                                                                                           12.2    36    
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGA	AATTGGTAACACCTAATTGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTC	ARRGKLVTPNWDYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	277	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_3042   2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAACCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAC  91
V  96.2% (277/288)  IGHV1-18*04  7    ...................C............G....................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  C  Y  N  G  N  T  K  Y  A  L 
                    Query_3042   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGTTGTTACAATGGTAACACAAAGTATGCACTG  181
V  96.2% (277/288)  IGHV1-18*04  97   ...........................................................CGC..................C.......A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  H  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3042   182  AAGCACCAGGGCAGAGTCACCATGACCACAGACACATCGACGAGCACAGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.2% (277/288)  IGHV1-18*04  187  ....T.................................C..............C....................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------CDR3-IMGT-------------------->                           
                                       V  Y  Y  C  A  R  R  G  K  L  V  T  P  N  W  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_3042   272  GTGTATTACTGTGCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  361
V  96.2% (277/288)  IGHV1-18*04  277  ..................------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD3-16*01  18   -------------------......-----------------------------------------------------------------  23
J  100.0% (50/50)   IGHJ6*02     13   ----------------------------------------------............................................  56

                                            
                                       S  S 
                    Query_3042   362  TCCTCA  367
J  100.0% (50/50)   IGHJ6*02     57   ......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_343479

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           321     7e-90
IGHD3-16*01                                                                                           12.2    32   
IGHJ2*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGGCG	TGGGGG	GATCAAGGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGGCGTGGGGGGATCAAGGGATCCTGGTACTCCGATCTC	ARVRRGGIKGSWYSDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3043   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGACATGAAATGAATTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  91.2% (227/249)  IGHV3-48*03  47   ..............................................TT..........C....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  T  G  S  T  L  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3043   91   AGTGGGTTTCACACATCAGTACTGGTAGTACTCTAATAAATTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  91.2% (227/249)  IGHV3-48*03  137  ...........T....T....G.A..G...G.ACC...T.C................................................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      A  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  F  Y  Y  C  A  R  V  R  R  G  G  I  K  
                    Query_3043   181  CGAATTCACTCTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTTTCTATTACTGTGCGAGAGTCCGGCGTGGGGGGATCAAGG  270
V  91.2% (227/249)  IGHV3-48*03  227  A...C.....G.................C.....................G.T................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------------......--------  22

                                      T------------------>                                  
                                      G  S  W  Y  S  D  L  W  G  R  G  T  L  V  V  V  S  S  
                    Query_3043   271  GATCCTGGTACTCCGATCTCTGGGGCCGTGGCACCCTGGTCGTTGTCTCCTCAG  324
J  94.0% (47/50)    IGHJ2*01     4    ----........T............................AC...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_77321

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           332     3e-93
IGHD3-9*01                                                                                            12.2    31   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGA	ATATTT	CCCACGAGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGACGAATATTTCCCACGAGGCTTTCAGTAC	VRDEYFPRGFQY	237	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	244	8	7	1	0	87.5
Total	N/A	N/A	232	222	10	0	95.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  G  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  
                    Query_3044   13   GTGCAGCCTCTGGATTCACCTTCAGTGGCTACTGGATGCACTGGGTCCGCCAAGCACCAGGGAAGGGGCTGGTGTGGGTCTCACGTATTA  102
V  95.7% (222/232)  IGHV3-74*01  65   ..........................A............................T..................................  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  S  D  G  S  I  I  D  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  
                    Query_3044   103  ATAGTGATGGGAGTATCATAGACTCCGCGGATTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACACTGTATCTGC  192
V  95.7% (222/232)  IGHV3-74*01  155  ...............G..C.AG..A......C...............................................G..........  244
                                      N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------CDR3-IMGT------------>          
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  E  Y  F  P  R  G  F  Q  Y  W  G  Q  
                    Query_3044   193  AAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGTAAGAGACGAATATTTCCCACGAGGCTTTCAGTACTGGGGCCAGG  282
V  95.7% (222/232)  IGHV3-74*01  245  .............................................C......--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (6/6)     IGHD3-9*01   9    -------------------------------------------------------......-----------------------------  14
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------....G.C.............  24

                                                              
                                      G  T  L  V  T  V  S  S  
                    Query_3044   283  GAACCCTGGTCACCGTCTCCTCAG  306
J  95.5% (42/44)    IGHJ4*02     25   ........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_77320

Length=318
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           307     1e-85
IGHD4-17*01                                                                                           16.1    2.0  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCG	ACGGTGAC	ACCGAGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACGGTGACACCGAGAATGACTAC	AADGDTENDY	230	259	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	232	3	3	0	0	100
Total	N/A	N/A	220	208	12	0	94.5


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  L  T  F  S  S  F  G  M  H  W  V  R  Q  P  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_3045   13   GTCTGGACTCACCTTCAGTAGCTTTGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  94.5% (208/220)  IGHV3-33*01  72   .......T...............A......................G...........................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  K  K  Y  Y  T  D  S  V  K  G  R  F  I  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_3045   103  TGGAAGTAAGAAATACTATACAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCAAGAACACGTTGTATCTGCAGATGAA  192
V  94.5% (208/220)  IGHV3-33*01  162  .........T.........G........................C............................C..........A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------CDR3-IMGT--------->                       
                                        S  L  R  V  D  D  T  A  V  Y  F  C  A  A  D  G  D  T  E  N  D  Y  W  G  Q  G  T  L  V  T
                    Query_3045   193  CAGCCTGAGAGTCGACGACACGGCTGTCTATTTCTGTGCGGCCGACGGTGACACCGAGAATGACTACTGGGGCCAGGGAACCCTGGTCAC  282
V  94.5% (208/220)  IGHV3-33*01  252  ...........C...G...........G....A.......--------------------------------------------------  291
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                   
D  100.0% (8/8)     IGHD4-17*01  6    --------------------------------------------........--------------------------------------  13
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------------------------..............................  37

                                                 
                                        V  S  S  
                    Query_3045   283  CGTCTCCTCAG  293
J  100.0% (41/41)   IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30726981


Query= Query_77323

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           364     5e-103
IGHD3-10*01                                                                                           12.2    32    
IGHJ2*01                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCCGACCCTAGTGAATCTTA	ATTATA	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCCGACCCTAGTGAATCTTAATTATAACTGGTACTTCGATCTC	AKPTLVNLNYNWYFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3046   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (240/247)  IGHV3-23*01  47   ............................T.............................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  D  R  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3046   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGATAGAACATTTTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  97.2% (240/247)  IGHV3-23*01  137  ..............................G...C....AC.................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  T  L  V  N  L  N  
                    Query_3046   181  AGAACACGCTGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAAGCCGACCCTAGTGAATCTTAATT  270
V  97.2% (240/247)  IGHV3-23*01  227  ...................A................................A..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-10*01  24   ---------------------------------------------------------------------------------------...  26

                                      T------------------>                                  
                                      Y  N  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3046   271  ATAACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  100.0% (6/6)     IGHD3-10*01  27   ...---------------------------------------------------  29
J  100.0% (51/51)   IGHJ2*01     3    ---...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_77322

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           304     1e-84
IGHD3-10*01                                                                                           18.0    0.60 
IGHJ1*01                                                                                              37.2    2e-06


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGAAACCCCCGA	ACTGTGGTTCGG	CCACTTATCTAACCTTGACTTG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGAAACCCCCGAACTGTGGTTCGGCCACTTATCTAACCTTGACTTG	ARDETPELWFGHLSNLDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  T  M  T  W  V  R  L  A  P  R  K  G  L  
                    Query_3047   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTTCCTATACCATGACCTGGGTCCGCCTGGCTCCACGGAAGGGGCTGG  90
V  88.8% (222/250)  IGHV3-21*01  47   .....................................C......AG.....G.....A...........A.......G............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  K  T  T  T  Y  E  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3047   91   AGTGGGTTTCATCTATTAGTAAAACTACTACTTATGAAGACTACGCAGACTCTGTGAAGGGGCGATTCACCATCTCCAGAGACAACGCCA  180
V  88.8% (222/250)  IGHV3-21*01  137  .......C.....C.......GT.G..G..G...CAT.T.............A........C............................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  D  E  T  P  E  L  W  
                    Query_3047   181  AGAATTCTCTCTTTCTACAAATGAACAGCCTGAGGGCCGAGGACACGGCTGTTTATTTCTGTGCGAGAGACGAAACCCCCGAACTGTGGT  270
V  88.8% (222/250)  IGHV3-21*01  227  ....C..A..G.A...G.................A.................G....A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD3-10*01  6    ----------------------------------------------------------------------------------...A....  13

                                      IMGT--------------------->                                  
                                      F  G  H  L  S  N  L  D  L  W  G  Q  G  T  L  L  I  V  S  S  
                    Query_3047   271  TCGGCCACTTATCTAACCTTGACTTGTGGGGCCAGGGCACCCTCCTAATTGTCTCCTCAG  330
D  91.7% (11/12)    IGHD3-10*01  14   ....--------------------------------------------------------  17
J  85.3% (29/34)    IGHJ1*01     19   --------------------------.................GG.C.CC..........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_343472

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD3-3*01                                                                                            23.8    0.011
IGHJ5*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCTGTCCCGC	ATTATGGTTTTTGGAATGATTATT	CCAAAATCTAACTCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTGTCCCGCATTATGGTTTTTGGAATGATTATTCCAAAATCTAACTCTTTCGACACC	ARGLSRIMVFGMIIPKSNSFDT	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  Y  G  G  S  F  N  G  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3048   1    ACCCTGTCCCTCACCTGCTCTGTCTATGGTGGGTCGTTCAATGGTCACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  92.2% (226/245)  IGHV4-34*01  49   ..................G................C....G....T............................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  D  T  N  Y  N  S  S  L  K  S  R  V  T  L  S  V  D  T  S  R  N 
                    Query_3048   91   TGGATTGGGGAAATTTCTCATAGTGGAGACACCAACTACAACTCGTCCCTCAAGAGTCGAGTCACCTTGTCAGTTGACACGTCCAGGAAC  180
V  92.2% (226/245)  IGHV4-34*01  139  ..............CAA..........AG.............C.......................A.A.....A..........A....  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  T  S  L  T  V  A  D  T  A  V  Y  Y  C  A  R  G  L  S  R  I  M  V  F  G 
                    Query_3048   181  CAGTTCTCCCTGAAGCTGACCTCCCTGACCGTCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCCTGTCCCGCATTATGGTTTTTGGA  270
V  92.2% (226/245)  IGHV4-34*01  229  ...................G...TG......C...............G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  83.3% (20/24)    IGHD3-3*01   3    ---------------------------------------------------------------------------....C.A........  17

                                      -IMGT--------------------------->                                  
                                       M  I  I  P  K  S  N  S  F  D  T  W  G  P  G  T  L  V  T  V  S  S  
                    Query_3048   271  ATGATTATTCCAAAATCTAACTCTTTCGACACCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  337
D  83.3% (20/24)    IGHD3-3*01   18   G..G.....----------------------------------------------------------  26
J  95.3% (41/43)    IGHJ5*02     9    ------------------------......C.........A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_343473

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*04                                                                                           410     1e-116
IGHD3-3*01                                                                                            33.4    2e-05 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*04	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCCCTAAGTG	ATTACGATTTTTGGAGT	TCGGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCCCTAAGTGATTACGATTTTTGGAGTTCGGGCTGGTTCGACCCC	AKPLSDYDFWSSGWFDP	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	67	4	0	94.4
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	112	2	0	98.2
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  T  C  A  A  S  G  F  T  F  T  D  
                    Query_3049   6    TGCAGCTGGTGCAGTCTGGGGGAGGCCTGGTACAGCCGGGGGGGTCCCTGAGACTCACCTGTGCAGCCTCTGGATTCACCTTTACCGACT  95
V  95.2% (276/290)  IGHV3-23*04  5    ...........G..............T..........T..................T...........................G.AG..  94
                                         Q  L  V  E  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  S  G  S  G  G  V  T  N  Y  A  
                    Query_3049   96   ATGCCATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGGAGTGGGTCTCAGGTATTAGTGGTAGCGGTGGTGTCACAAACTACGCAG  185
V  95.2% (276/290)  IGHV3-23*04  95   ...............................G......................C............T......AG....T.........  184
                                      Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  
                    Query_3049   186  ACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGG  275
V  95.2% (276/290)  IGHV3-23*04  185  ..........................................................................................  274
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  

                                      -------------><--------------------CDR3-IMGT-------------------->                         
                                      A  L  Y  Y  C  A  K  P  L  S  D  Y  D  F  W  S  S  G  W  F  D  P  W  G  R  G  T  L  V  T  
                    Query_3049   276  CCTTATATTACTGTGCGAAACCCCTAAGTGATTACGATTTTTGGAGTTCGGGCTGGTTCGACCCCTGGGGCCGGGGAACCCTGGTCACCG  365
V  95.2% (276/290)  IGHV3-23*04  275  ..G.................----------------------------------------------------------------------  294
                                      A  V  Y  Y  C  A  K                                                                       
D  100.0% (17/17)   IGHD3-3*01   3    ------------------------------.................-------------------------------------------  19
J  97.9% (46/47)    IGHJ5*02     5    ----------------------------------------------------....................A.................  42

                                               
                                      V  S  S  
                    Query_3049   366  TCTCCTCAG  374
J  97.9% (46/47)    IGHJ5*02     43   .........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_343470

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*02                                                                                           327     9e-92
IGHD3-3*01                                                                                            39.1    3e-07
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTAAA	ACGATTTTTGGAGTGGTTAT	CCATTTGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTAAAACGATTTTTGGAGTGGTTATCCATTTGGGCTACTTTGACTAC	AKVKTIFGVVIHLGYFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3050   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-30*02  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  G  I  A  R  Y  E  A  S  N  T  Y  Y  A  G  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3050   91   AGTGGGTTGGAATTGCACGGTATGAAGCAAGTAATACATACTACGCAGGCTCCGTGAAGGGCCGATTCACCATATCCAGAGACAATTCCA  180
V  92.0% (229/249)  IGHV3-30*02  137  .......G.C.T..AT.........T.G........A......T....A........................C................  226
                                      E  W  V  A  F  I  R  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  K  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  M  Y  Y  C  A  K  V  K  T  I  F  G  V  
                    Query_3050   181  GGAAGACCCTATATCTGCAAATGAACAGCCTCAGAGCCGATGACACGGCTATGTATTACTGTGCGAAAGTTAAAACGATTTTTGGAGTGG  270
V  92.0% (229/249)  IGHV3-30*02  227  A...C..G..G....................G.....T..G.........G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (20/20)   IGHD3-3*01   6    --------------------------------------------------------------------------................  21

                                      IMGT--------------------->                                  
                                      V  I  H  L  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3050   271  TTATCCATTTGGGCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (20/20)   IGHD3-3*01   22   ....--------------------------------------------------------  25
J  100.0% (47/47)   IGHJ4*02     2    -------------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_343471

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           279     3e-77
IGHD2-8*01                                                                                            12.2    33   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	C	GTATGC	GACGGAGTGAACTCGGCTTAGGTGGGG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGTATGCGACGGAGTGAACTCGGCTTAGGTGGGGACTTCTTTGACCAC	ARMRRSELGLGGDFFDH	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	21	9	0	70
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	14	7	0	66.7
FR3-IMGT	130	243	114	96	18	0	84.2
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	212	34	0	86.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  V  N  Y  L  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3051   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAATAGTGTCAATTACCTCTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  86.2% (212/246)  IGHV4-31*03  49   .............................T..........GC....GTGG....TA..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  A  Y  Y  S  G  S  D  R  Y  N  P  S  L  K  N  R  V  S  M  S  L  D  T  S 
                    Query_3051   91   CTGGAGTGGATTGGGTACGCCTACTACAGTGGGAGTGATCGGTACAACCCATCCCTCAAGAATCGAGTTTCCATGTCACTAGATACGTCG  180
V  86.2% (212/246)  IGHV4-31*03  139  ..................AT...T...........CACCTAC........G..........G.......A....A...G....C.....T  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       R  N  Q  F  S  L  K  V  T  S  M  T  A  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  L  G 
                    Query_3051   181  AGGAATCAGTTCTCCCTGAAGGTGACCTCTATGACGGCCGCGGACACGGCCATCTATTACTGTGCGCGTATGCGACGGAGTGAACTCGGC  270
V  86.2% (212/246)  IGHV4-31*03  229  .A...C...............C...G....G....T...............G.G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (6/6)     IGHD2-8*01   20   -------------------------------------------------------------------......-----------------  25

                                      MGT-------------------->                                  
                                       L  G  G  D  F  F  D  H  W  G  Q  G  A  L  V  S  V  S  S  
                    Query_3051   271  TTAGGTGGGGACTTCTTTGACCACTGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  328
J  91.7% (44/48)    IGHJ4*02     1    ----------...A.......T..............A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_76058

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           382     4e-108
IGHD5-18*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	GGATACACCTATGGT	CA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGATACACCTATGGTCATGACTAC	AREGYTYGHDY	289	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	65	6	0	91.5
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	106	8	0	93
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	292	268	24	0	91.8


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  F  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  G  P  F  S  S  
                    Query_3052   5    TGCAGCTGGTGCAGTCTGGAGCCGAGTTTAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGCAAGGCCTCTGGCGGCCCCTTCAGCAGTT  94
V  91.8% (268/292)  IGHV1-69*01  5    ...................G..T...G.G......................A...............T.....A...A..........C.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  A  I  S  W  I  R  Q  A  P  G  L  G  L  E  W  M  G  G  I  I  P  I  L  G  P  A  N  Y  A  
                    Query_3052   95   ACGCTATTAGCTGGATTCGACAGGCCCCTGGACTAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCCTTGGTCCAGCAAACTACGCAG  184
V  91.8% (268/292)  IGHV1-69*01  95   .T.....C......G.G................A..................................T.....A..............C  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      V  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  L  E  V  K  S  L  R  S  E  D  T  
                    Query_3052   185  TGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACTTGGAGGTGAAAAGCCTGCGATCTGAGGACACGG  274
V  91.8% (268/292)  IGHV1-69*01  185  A.......................................................A.....C...GC......A...............  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-----------CDR3-IMGT----------->                                
                                      A  V  Y  Y  C  A  R  E  G  Y  T  Y  G  H  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3052   275  CCGTGTATTATTGTGCGAGAGAAGGATACACCTATGGTCATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  353
V  91.8% (268/292)  IGHV1-69*01  275  ..........C...........---------------------------------------------------------  296
                                      A  V  Y  Y  C  A  R                                                            
D  93.3% (14/15)    IGHD5-18*01  3    -----------------------.......G.......-----------------------------------------  17
J  100.0% (39/39)   IGHJ4*02     8    ----------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_47930

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGCCCCC	ARSGSGNYEGWLAP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3053   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3053   91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_3053   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  95.5% (231/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  95.7% (45/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  A  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3053   271  CTCGCCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  95.7% (45/47)    IGHJ5*02     9    T...A......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_21664

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           427     1e-121
IGHD6-19*01                                                                                           16.1    2.5   
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGTGGGGAAACAGA	AGTGGCTG	CCA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCC	ARLRGETEVAANNWFDP	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  M  G  S  G  Y  T  F  A  G  Y
                    Query_3054   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTATGGGATCTGGATACACCTTTGCCGGCTA  90
V  97.2% (281/289)  IGHV5-51*03  6    ..............................................................A...T..........G....A..A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_3054   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  97.2% (281/289)  IGHV5-51*03  96   ........G..............................................A..................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3054   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.2% (281/289)  IGHV5-51*03  186  .......................................C..................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  L  R  G  E  T  E  V  A  A  N  N  W  F  D  P  W  G  Q  G  T  L  V  T  V
                    Query_3054   271  CATGTATTACTGTGCGAGACTTCGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGT  360
V  97.2% (281/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD6-19*01  10   ------------------------------------........----------------------------------------------  17
J  100.0% (50/50)   IGHJ5*02     1    -----------------------------------------------...........................................  43

                                             
                                        S  S 
                    Query_3054   361  CTCCTCA  367
J  100.0% (50/50)   IGHJ5*02     44   .......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_342708

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           251     8e-69
IGHD7-27*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GAAC	AACTGGGGA	ATC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGAACAACTGGGGAATCGACTAC	ARNNWGIDY	240	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	125	24	13	11	0	54.2
FR3-IMGT	126	239	114	96	18	0	84.2
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	230	195	35	0	84.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  R  R  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  L  W  V  A  R  I 
                    Query_3055   15   TGTGCAGCCTCTGGATTCACCTTCAGAAGGCACTGGATGCACTGGGTCCGCCAAGCTCCAGGTAAGGGGCTGCTGTGGGTCGCACGTATT  104
V  84.8% (195/230)  IGHV3-74*01  64   ..........................T..CT...............................G.........G........T........  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       D  Y  D  G  G  T  L  D  Y  A  A  S  V  E  G  R  F  T  I  S  R  D  N  A  A  N  T  L  Y  L 
                    Query_3055   105  GACTACGATGGGGGTACGCTGGACTATGCGGCCTCCGTGGAGGGACGATTCACCATCTCCAGAGACAACGCCGCCAACACGCTCTATCTG  194
V  84.8% (195/230)  IGHV3-74*01  154  A.TAGT......A...GCACAAG...C....A.......A....C...........................AAG........G......  243
                                       N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 

                                      --------------------------------------------><--------CDR3-IMGT-------->                  
                                       Q  M  N  S  L  R  V  E  D  S  A  V  Y  Y  C  A  R  N  N  W  G  I  D  Y  W  G  Q  G  T  L 
                    Query_3055   195  CAGATGAATAGTCTAAGAGTCGAGGACTCGGCTGTCTATTATTGCGCAAGGAACAACTGGGGAATCGACTACTGGGGCCAGGGAACCCTG  284
V  84.8% (195/230)  IGHV3-74*01  244  ..A.....C.....G....C.......A.......G.....C..T.....----------------------------------------  293
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  100.0% (9/9)     IGHD7-27*01  3    ------------------------------------------------------.........---------------------------  11
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------------------------------........................  32

                                                      
                                       V  T  V  S  S  
                    Query_3055   285  GTCACCGTCTCCTCAG  300
J  100.0% (40/40)   IGHJ4*02     33   ................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_342707

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            335     4e-94
IGHD2-15*01                                                                                           25.7    0.003
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAGTTCACCA	TGTAGTGGTGGTA	CATGTTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAGTTCACCATGTAGTGGTGGTACATGTTATGATGCCTTCGACATC	ARDSSPCSGGTCYDAFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  S  N  S  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3056   1    GGTCCCTGAGACTCTCCTGTGTAGCGTCTGGATTCTCGTTTAGTAATTCTTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-7*01   47   .....................C...C.........A.C.......GC.A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  R  K  D  E  T  A  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3056   91   AGTGGGTGGCCAACATAAGGAAAGATGAAACTGCGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.8% (232/250)  IGHV3-7*01   137  ..................A.C......G..G..A....T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  S  L  Q  M  N  S  L  T  A  E  D  T  A  I  Y  Y  C  A  R  D  S  S  P  C  S  G  
                    Query_3056   181  AGAACTCACTGTCTCTGCAAATGAACAGCCTGACAGCCGAGGACACGGCTATTTATTACTGTGCGAGAGACAGTTCACCATGTAGTGGTG  270
V  92.8% (232/250)  IGHV3-7*01   227  ............A....................G................G.G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD2-15*01  8    --------------------------------------------------------------------------------..........  17

                                      IMGT--------------------->                                  
                                      G  T  C  Y  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3056   271  GTACATGTTATGATGCCTTCGACATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  330
D  100.0% (13/13)   IGHD2-15*01  18   ...---------------------------------------------------------  20
J  94.0% (47/50)    IGHJ3*02     1    ----------......T..T..T.....................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_342706

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            313     1e-87
IGHD1-26*01                                                                                           19.9    0.15 
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-26*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCAGAC	AGTGGGAGCT	TCTCTAAT	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGCAGACAGTGGGAGCTTCTCTAATTGGTACTTCGATCTC	ARDADSGSFSNWYFDL	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	224	24	0	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  V  S  I  S  S  D  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_3057   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGTCTCCATCAGCAGTGATAACTGGTGGAGTTGGGTACGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.3% (224/248)  IGHV4-4*01   49   ...................C...........G.............AG..................C........................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  Q  I  F  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_3057   91   GAGTGGATTGGACAAATCTTTCATAGTGGCAGCACCAATTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACAAGTCTAAG  180
V  90.3% (224/248)  IGHV4-4*01   139  ...........GG......A.........G........C......................................A........C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  Q  F  S  L  K  V  N  S  V  S  A  A  D  T  A  I  Y  F  C  A  R  D  A  D  S  G  S  F  S 
                    Query_3057   181  AACCAGTTTTCCCTAAAAGTGAATTCTGTGAGTGCCGCGGACACGGCCATTTACTTCTGTGCGAGAGATGCAGACAGTGGGAGCTTCTCT  270
V  90.3% (224/248)  IGHV4-4*01   229  ........C.....G..GC...GC.......CC...............G.G..T.G............----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (10/10)   IGHD1-26*01  6    ---------------------------------------------------------------------------..........-----  15

                                      ----------------->                                  
                                       N  W  Y  F  D  L  W  G  P  G  T  L  V  T  V  S  S  
                    Query_3057   271  AATTGGTACTTCGATCTCTGGGGTCCTGGCACCCTGGTCACTGTCTCCTCAG  322
J  95.9% (47/49)    IGHJ2*01     5    ---....................C.G..........................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_342705

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         319     2e-89
IGHD2-2*01                                                                                            35.3    4e-06
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGGGGAG	TATTGTAGTAGTACCAACTGC	ATG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGGGGAGTATTGTAGTAGTACCAACTGCATGTACGGTCTGGACGTC	ARGGEYCSSTNCMYGLDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  D  I  Y  S  W  N  W  I  R  Q  P  P  G  M  G 
                    Query_3058     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCTCCAGTGATATTTACTCCTGGAACTGGATCCGGCAGCCACCAGGGATGGGC  90
V  91.1% (226/248)  IGHV4-30-2*01  49   .......................................AG.....G.GG...........G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  V  G  H  I  Y  H  R  G  T  T  Y  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  R  S 
                    Query_3058     91   CTGGAGTGGGTTGGCCACATCTATCATAGGGGGACCACCTACTACAACCCGTCCCTCCAGAGTCGAGTCACCATCTCAGTTGACAGGTCC  180
V  91.1% (226/248)  IGHV4-30-2*01  139  .........A....GT.............T....G......................A................A.....A.........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  K  H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  E  Y  C  S  S 
                    Query_3058     181  AAGAAACACTTCTCGTTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGGGGGGGGGAGTATTGTAGTAGT  270
V  91.1% (226/248)  IGHV4-30-2*01  229  .....C..G.....CC...A.....G...........................G..............----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  95.2% (20/21)    IGHD2-2*01     5    ------------------------------------------------------------------------------............  16

                                        -IMGT--------------------->                                 
                                         T  N  C  M  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3058     271  ACCAACTGCATGTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
D  95.2% (20/21)    IGHD2-2*01     17   ....G....---------------------------------------------------  25
J  97.9% (47/48)    IGHJ6*02       15   ------------......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_76053

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           277     9e-77
IGHD3-3*01                                                                                            16.1    2.3  
IGHJ5*01                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCCGATGGGGAAGGGACT	ATTTTTGG	GAAGGGGTGAAA	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCCGATGGGGAAGGGACTATTTTTGGGAAGGGGTGAAATTCGACTCT	ARGRWGRDYFWEGVKFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	213	36	0	85.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  L  S  L  E  T  Y  E  V  N  W  V  R  Q  A  P  G  K  A  L  
                    Query_3059   1    GGTCCCTGAGACTCTCCTGTGCAGGGTCTGGACTCAGCCTCGAAACCTATGAAGTGAATTGGGTCCGCCAGGCTCCAGGGAAGGCACTGG  90
V  85.5% (213/249)  IGHV3-48*03  47   ........................CC......T...C.T..AGT.GT......A....C.........................GG....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  S  G  S  T  T  Y  Y  A  D  S  M  K  G  R  L  T  I  S  R  D  N  A  
                    Query_3059   91   AATGGATTTCATACATAAGTAGTAGTGGCAGTACCACATATTACGCAGACTCTATGAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  85.5% (213/249)  IGHV3-48*03  137  .G...G..........T...........T.......T...C............G...........T........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  V  F  L  E  M  N  S  L  R  L  D  D  A  A  L  Y  Y  C  A  R  G  R  W  G  R  D  Y  
                    Query_3059   181  AGAATTCGGTTTTTTTGGAAATGAACAGCCTGAGACTCGACGACGCGGCTCTTTATTATTGTGCGCGAGGCCGATGGGGAAGGGACTATT  270
V  85.5% (213/249)  IGHV3-48*03  227  ....C..AC.G.A.C..C.................GC...G...A.....G.......C......A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-3*01   9    ---------------------------------------------------------------------------------------...  11

                                      IMGT--------------------->                                  
                                      F  W  E  G  V  K  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_3059   271  TTTGGGAAGGGGTGAAATTCGACTCTTGGGGCCAGGGAATCTTGGTCACCGTCTCCTCAG  330
D  100.0% (8/8)     IGHD3-3*01   12   .....-------------------------------------------------------  16
J  90.7% (39/43)    IGHJ5*01     9    -----------------........C........A....C.C..................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_342702

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           361     4e-102
IGHD3-22*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GTTAGCGGG	GATAGTAG	CATCTAGTGCAGTTAGAGCGGACTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTTAGCGGGGATAGTAGCATCTAGTGCAGTTAGAGCGGACTTT	AKLAGIVASSAVRADF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	239	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3060   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (239/247)  IGHV3-23*01  47   ...........................................C.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  V  S  G  S  G  G  A  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3060   91   AGTGGGTCTCAGCTGTCAGTGGTAGTGGTGGTGCCACATTCTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.8% (239/247)  IGHV3-23*01  137  ..............A.T...............AG.....A..................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  L  A  G  I  V  A  S  
                    Query_3060   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAAGTTAGCGGGGATAGTAGCATCTA  270
V  96.8% (239/247)  IGHV3-23*01  227  .........................................................A.........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD3-22*01  11   ----------------------------------------------------------------------------........------  18

                                      T------------------>                                  
                                      S  A  V  R  A  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3060   271  GTGCAGTTAGAGCGGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (34/34)   IGHJ4*02     15   --------------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_342701

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           364     5e-103
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	113	1	0	99.1
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_3061   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  96.8% (241/249)  IGHV4-31*03  50   .....TCC...A....................................G.........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  
                    Query_3061   94   TGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCTA  183
V  96.8% (241/249)  IGHV4-31*03  140  ..............T......A...........................................G........................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A  
                    Query_3061   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCAA  273
V  96.8% (241/249)  IGHV4-31*03  230  .....................................................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD2-21*02  5    ----------------------------------------------------------------------..........G.......--  22

                                      ------------->                                  
                                      N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3061   274  ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (48/48)   IGHJ4*02     1    ................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_342700

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           408     4e-116
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	CGGATCGGTCCCCCCTTCAC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGATCGGTCCCCCCTTCACTGATGCTTTTGATATG	ARRIGPPFTDAFDM	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  M  G  S  G  Y  I  F  T  N  Y
                    Query_3062   1    GCAGCTGGTGCAGTCTGGGGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTATGGGTTCTGGATACATTTTTACCAATTA  90
V  95.2% (275/289)  IGHV5-51*03  6    ..................A...........................................A..............GC.......GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  I  V  Y  P  D  D  S  D  I  R  Y  K  P
                    Query_3062   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATAGGGATCGTCTATCCTGATGACTCTGATATTAGATACAAACC  180
V  95.2% (275/289)  IGHV5-51*03  96   ................................................G......A.........G...........CC.......GC..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  T  S  L  K  A  S  D  T  A
                    Query_3062   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGACCAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (275/289)  IGHV5-51*03  186  .................................................................G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  R  I  G  P  P  F  T  D  A  F  D  M  W  G  Q  G  T  K  L  T  V  S  S  
                    Query_3062   271  CATGTATTACTGTGCGAGACGGATCGGTCCCCCCTTCACTGATGCTTTTGATATGTGGGGCCAAGGGACAAAGCTCACCGTCTCTTCAG  359
V  95.2% (275/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
J  94.0% (47/50)    IGHJ3*02     1    ---------------------------------------...............C................T.G...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_212298

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           290     2e-80
IGHD3-16*02                                                                                           27.6    9e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	261	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	42	9	0	82.4
CDR2-IMGT	126	146	21	16	5	0	76.2
FR3-IMGT	147	260	114	93	21	0	81.6
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	226	41	0	84.6


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  
                    Query_3063   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCACTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGC  90
V  84.6% (226/267)  IGHV4-59*01  26   ................T..............C..............C.......G.......A...G..........AG......C....  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  R  G  L  E  W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  
                    Query_3063   91   AGCCTCCAGGGAGGGGACTGGAGTGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCC  180
V  84.6% (226/267)  IGHV4-59*01  116  ....C.......A.............A....G.ATA...AT.A..G..........A..............C...A......A......A  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      L  S  G  D  M  S  R  N  Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  
                    Query_3063   181  TGTCAGGAGACATGTCTAGGAATCAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTC  270
V  84.6% (226/267)  IGHV4-59*01  206  .A....T.....C...C.A...C.....C.....G..G....G.TC......................GTG....A...........---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -----------------------CDR3-IMGT-------------------------------->                         
                                      L  L  I  E  D  P  T  Y  V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  
                    Query_3063   271  TTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCG  360
D  94.1% (16/17)    IGHD3-16*02  14   -----------------------.............A...--------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    --------------------------------------------------------...G....................AT........  41

                                               
                                      V  S  S  
                    Query_3063   361  TCTCTTCAG  369
J  93.0% (40/43)    IGHJ3*01     42   .........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_192584

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           327     9e-92
IGHD1-1*01                                                                                            12.2    34   
IGHJ5*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCGCTCCGAAAGAATTTAC	ACAACT	AGTATCTTTGAGAGGCCCAGGGTTGTGGC	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGCTCCGAAAGAATTTACACAACTAGTATCTTTGAGAGGCCCAGGGTTGTGGCCTGGCTCGACCCC	ARGRSERIYTTSIFERPRVVAWLDP	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  S  P  R  K  G  L  E 
                    Query_3064   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGCTACTACTGGAGTTGGATCCGCCAGTCCCCAAGGAAGGGCCTGGAG  90
V  92.7% (227/245)  IGHV4-34*01  49   ............................................T...........C............C.....G.......G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  N  S  N  Y  N  P  S  L  R  S  R  V  T  L  S  V  D  T  S  K  N 
                    Query_3064   91   TGGATTGGAGAAATCAATCATAGTGGAAACTCCAACTATAACCCGTCCCTTAGGAGTCGAGTCACCTTATCCGTAGACACGTCCAAGAAC  180
V  92.7% (227/245)  IGHV4-34*01  139  ........G...................G.A.......C...........C.A.............A....A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  S  E  R  I  Y  T  T 
                    Query_3064   181  CAGTTCTCCCTGAGGCTGACCTCAGTGACCGCCGCGGACACGGCTGTCTATTACTGCGCGAGAGGCCGCTCCGAAAGAATTTACACAACT  270
V  92.7% (227/245)  IGHV4-34*01  229  .............A.....G...T.......................G........T........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD1-1*01   4    ------------------------------------------------------------------------------------......  9

                                      CDR3-IMGT-------------------------------->                                  
                                       S  I  F  E  R  P  R  V  V  A  W  L  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_3064   271  AGTATCTTTGAGAGGCCCAGGGTTGTGGCCTGGCTCGACCCCTGGGGCCAGGGAACCCCAGTCACCGTCTCCTCAG  346
J  93.6% (44/47)    IGHJ5*02     5    -----------------------------....T........................TG................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_304020

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           400     9e-114
IGHD2-15*01                                                                                           21.8    0.047 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGTTTTTC	GGATATTGTAG	GGATGGAAATTGTTACGCACTGGAGTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGTTTTTCGGATATTGTAGGGATGGAAATTGTTACGCACTGGAGTAT	ARDRFFGYCRDGNCYALEY	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  T  F  T  S  Y 
                    Query_3065   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACCTCTGGTTACACCTTTACCAGTTAC  91
V  94.1% (273/290)  IGHV1-18*04  7    ............................A..................................G.T....................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  L  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  T  Y  N  G  N  T  N  Y  A  Q 
                    Query_3065   92   GGTCTCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCGGCACTTACAATGGGAACACAAACTATGCACAG  181
V  94.1% (273/290)  IGHV1-18*04  97   ...A...G.................................................A..G..........T..................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  A  D  T  S  T  R  T  A  Y  L  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3065   182  AAGTTCCAGGGCAGAGTCACCATGACCGCAGATACATCCACGAGAACAGCGTACTTGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.1% (273/290)  IGHV1-18*04  187  ...C.......................A....C...........C.....C...A...................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       L  Y  Y  C  A  R  D  R  F  F  G  Y  C  R  D  G  N  C  Y  A  L  E  Y  W  G  Q  G  T  L  V 
                    Query_3065   272  CTATATTACTGTGCGAGAGATAGGTTTTTCGGATATTGTAGGGATGGAAATTGTTACGCACTGGAGTATTGGGGCCAGGGAACCCTGGTC  361
V  94.1% (273/290)  IGHV1-18*04  277  G.G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (11/11)   IGHD2-15*01  2    ------------------------------...........-------------------------------------------------  12
J  100.0% (34/34)   IGHJ4*02     15   ---------------------------------------------------------------------.....................  35

                                                   
                                       T  V  S  S  
                    Query_3065   362  ACCGTCTCCTCAG  374
J  100.0% (34/34)   IGHJ4*02     36   .............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_41675

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	266	20	0	93


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_3066   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTCAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  93.0% (266/286)  IGHV5-51*01  6    ................................................G.................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  P  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_3066   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCCGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  93.0% (266/286)  IGHV5-51*01  96   ......................A.......G.......T.....G..........................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  T  S  V  N  T  A  Y  L  Q  W  S  T  R  G  A  P  D  P  A
                    Query_3066   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACACGTCCGTCAACACCGCCTACCTGCAGTGGAGCACCCGGGGGGCCCCCGACCCCGC  270
V  93.0% (266/286)  IGHV5-51*01  186  ....................C..............A....A...G.......................G..T.AA....T.G...A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3066   271  CATATATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.0% (266/286)  IGHV5-51*01  276  ...G............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_67589

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           346     2e-97
IGHD1-1*01                                                                                            10.3    118  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGCAC	CCAACCCCGATGGCA	ACAAC	CTA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGCACCCAACCCCGATGGCAACAACCTACC	STQPRWQQPT	249	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	253	5	4	1	0	80
Total	N/A	N/A	253	237	16	0	93.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  I  F  S  T  I  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3067   1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCATTTTCAGTACCATCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.7% (237/253)  IGHV3-15*01  47   .......T...............G............C........A.GC........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  I  D  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_3067   91   AGTGGGTTGGCCGTATTAAAAGCAAAATTGATGGTGAGACAACAGACTACGCTGCACCCGTGAAGGGCAGATTCACCATCTCAAGAGATG  180
V  93.7% (237/253)  IGHV3-15*01  137  ...........................C........G...........................A.........................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  E  T  E  D  T  A  L  Y  Y  C  S  T  Q  P  R  W  Q  
                    Query_3067   181  ATTCAAAAAACACGCTGTATTTGCAAATGAACAGCCTGGAAACCGAGGACACAGCCCTTTACTACTGTAGCACCCAACCCCGATGGCAAC  270
V  93.7% (237/253)  IGHV3-15*01  227  ....................C.................A.................G.G..T.......C...-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (5/5)     IGHD1-1*01   4    ----------------------------------------------------------------------------------------..  5

                                      ------->                                  
                                      Q  P  T  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3067   271  AACCTACCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
D  100.0% (5/5)     IGHD1-1*01   6    ...---------------------------------------  8
J  100.0% (36/36)   IGHJ5*02     16   ------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_265958

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           335     4e-94
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGCATC	ATTACTATGCTAACAGTGATTATT	TCGTAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCATCATTACTATGCTAACAGTGATTATTTCGTAGAC	ARGHHYYANSDYFVD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  G  H  P  H  P  G  K  G 
                    Query_3068   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCTTCTCAATCGGCAGTGGTGGTTACTACTGGAGCTGGGGCCACCCGCACCCAGGGAAGGGC  90
V  93.1% (231/248)  IGHV4-31*03  49   .............................TGG...C...A..........................AT..G..A................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  R  G  S  A  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3068   91   CTGGAGTGGATTGGCTGCATCTATTACCGTGGGAGCGCCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTCGACACGTCT  180
V  93.1% (231/248)  IGHV4-31*03  139  ..............G.A..........A........A...........................................A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  G  H  H  Y  Y  A  N 
                    Query_3068   181  AAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACTCGGCCGTGTATTACTGTGCGAGGGGGCATCATTACTATGCTAAC  270
V  93.1% (231/248)  IGHV4-31*03  229  .....................C...G...................A......................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  83.3% (20/24)    IGHD3-22*01  3    ----------------------------------------------------------------------------.........A..GT  16

                                      ----------------->                                  
                                       S  D  Y  F  V  D  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_3068   271  AGTGATTATTTCGTAGACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  322
D  83.3% (20/24)    IGHD3-22*01  17   ....G.....------------------------------------------  26
J  97.2% (35/36)    IGHJ4*02     13   ----------------..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_342236

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_3069   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  98.3% (284/289)  IGHV5-51*03  6    ..............................................................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_3069   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ...................................................G............................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3069   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3069   271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  98.3% (284/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_265956

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           263     2e-72
IGHD6-25*01                                                                                           18.0    0.60 
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTG	GCAGCGGCT	GCCACGAACTTCTATCACGACGAAC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCTGGCAGCGGCTGCCACGAACTTCTATCACGACGAACTGGACGTC	VRDLAAAATNFYHDELDV	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	13	8	0	61.9
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	206	38	0	84.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  P  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_3070   4    CCCTGAGACTCTCCTGTACTGTCTCTGGCGGCTCCATCCCTGGCTTCTACTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAGT  93
V  84.4% (206/244)  IGHV4-59*01  50   .....TCC...A....C...........T.........AG.A.T.A...........................A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  H  F  Y  Y  N  G  E  S  N  Y  N  P  S  L  K  S  R  V  S  I  S  L  D  M  S  K  S  
                    Query_3070   94   GGATTGGCCACTTCTACTACAATGGCGAGTCCAACTACAATCCCTCCCTCAAGAGTCGAGTCTCCATTTCTCTGGACATGTCCAAGAGTC  183
V  84.4% (206/244)  IGHV4-59*01  140  .......GT.TA....T....G...GAGCA..........C.....................A....A..AG.A....C........AC.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  F  T  S  V  T  A  A  D  T  A  V  Y  F  C  V  R  D  L  A  A  A  A  T  N  F  
                    Query_3070   184  AGTTCTCCCTGAAGTTCACTTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGTGAGAGATCTGGCAGCGGCTGCCACGAACTTCT  273
V  84.4% (206/244)  IGHV4-59*01  230  ..............C.G.GC...............................A.....C......--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (9/9)     IGHD6-25*01  8    --------------------------------------------------------------------.........-------------  16

                                      ------------------->                                 
                                      Y  H  D  E  L  D  V  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_3070   274  ATCACGACGAACTGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTCA  326
J  97.6% (40/41)    IGHJ6*02     22   ------------........................C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_265957

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           347     8e-98
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ6*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCA	ATATTGTAGTAGTACCA	AGTGTCCCGACCCC	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATCAATATTGTAGTAGTACCAAGTGTCCCGACCCCTACTACTACTACTACAATCTGGACGTC	AKDQYCSSTKCPDPYYYYYNLDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  H  Y  G  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3071   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATCACTATGGTTTACACTGGGTCCGCCAGGCGCCAGGCAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-30*18  47   ..........................................G.AG......CA.G.................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  F  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_3071   91   AGTGGGTGGCAGTTATTTCATTTGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCA  180
V  94.4% (236/250)  IGHV3-30*18  137  ................A....A.................................................A..................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  Q  Y  C  S  S  T  
                    Query_3071   181  GGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCGGAGGACACGGCTTTGTATTACTGTGCAAAAGATCAATATTGTAGTAGTACCA  270
V  94.4% (236/250)  IGHV3-30*18  227  A....................................T............G.............G.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (17/17)   IGHD2-2*01   4    -------------------------------------------------------------------------.................  20

                                      --CDR3-IMGT----------------------------->                                 
                                      K  C  P  D  P  Y  Y  Y  Y  Y  N  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3071   271  AGTGTCCCGACCCCTACTACTACTACTACAATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
J  95.0% (57/60)    IGHJ6*02     3    --------------...............GG.A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_265954

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           383     1e-108
IGHD3-9*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACACCATACGCCGGGT	TTACGATCTTTTGACTGG	N/A	TACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACACCATACGCCGGGTTTACGATCTTTTGACTGGTACCTTGACTCC	ARGHHTPGLRSFDWYLDS	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  R  Y 
                    Query_3072   2    CAGCTGGTGCAGTCTGGAGGTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACGTTTAGCAGATAT  91
V  92.4% (267/289)  IGHV1-18*01  7    ...................C...G.....................................................C....C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  K  N  G  N  T  N  Y  A  Q 
                    Query_3072   92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTAAAAATGGTAACACAAATTACGCACAG  181
V  92.4% (267/289)  IGHV1-18*01  97   ........C....................................................C.T.C..............C..T......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  V  Q  G  G  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  F  D  D  P  A 
                    Query_3072   182  AGGGTCCAGGGAGGAGTCACCATGACGACAGACACATCCACGAGTACAGCCTACATGGAGCTGCGGAGCCTGAGATTTGACGACCCGGCC  271
V  92.4% (267/289)  IGHV1-18*01  187  .A.C.......CA.............C.................C..................A............C.......A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  F  C  A  R  G  H  H  T  P  G  L  R  S  F  D  W  Y  L  D  S  W  G  Q  G  T  L  V  T 
                    Query_3072   272  GTTTATTTCTGTGCGAGAGGACACCATACGCCGGGTTTACGATCTTTTGACTGGTACCTTGACTCCTGGGGCCAGGGAACCCTGGTCACC  361
V  92.4% (267/289)  IGHV1-18*01  277  ..G....A...........-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  94.4% (17/18)    IGHD3-9*01   4    ------------------------------------.......A..........------------------------------------  21
J  95.7% (44/46)    IGHJ4*02     3    ------------------------------------------------------...T......A.........................  38

                                                
                                       V  S  S  
                    Query_3072   362  GTCTCCTCAG  371
J  95.7% (44/46)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_265955

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           361     4e-102
IGHD4-17*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCACTGCAACGCT	TACGGTGACTAC	GGCGT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCACTGCAACGCTTACGGTGACTACGGCGTTGATGCTTTTGATATC	ARDHCNAYGDYGVDAFDI	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	238	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  T  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3073   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCACCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (238/245)  IGHV4-59*01  49   .................................T........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  A  K  N 
                    Query_3073   91   TGGGTTGGGTATATCTATTACAGAGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGGCCAAGAAT  180
V  97.1% (238/245)  IGHV4-59*01  139  ...A...................T....G....................................................T.......C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  H  C  N  A  Y  G  D  Y 
                    Query_3073   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCACTGCAACGCTTACGGTGACTAC  270
V  97.1% (238/245)  IGHV4-59*01  229  ...................G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  5    ------------------------------------------------------------------------------............  16

                                      -------------------->                                  
                                       G  V  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3073   271  GGCGTTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  325
J  100.0% (50/50)   IGHJ3*02     1    -----..................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_67584

Length=410
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     2e-124
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGCCTACTTTCTTAGTTGGGGTTACTCTGGTA	GTATAACAGCAGCTGG	CGAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTAC	ARHAYFLSWGYSGSITAAGEIDY	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	285	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  A  T  Y
                    Query_3074   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTGCCACCTA  90
V  97.9% (285/291)  IGHV5-51*01  6    ....................................C........................................G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_3074   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  97.9% (285/291)  IGHV5-51*01  96   ............................................................................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_3074   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  97.9% (285/291)  IGHV5-51*01  186  .........................................................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        M  Y  Y  C  A  R  H  A  Y  F  L  S  W  G  Y  S  G  S  I  T  A  A  G  E  I  D  Y  W  G  Q
                    Query_3074   271  CATGTATTACTGTGCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTACTGGGGCCA  360
V  97.9% (285/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  93.8% (15/16)    IGHD6-13*01  3    -----------------------------------------------------.....G..........---------------------  18
J  100.0% (42/42)   IGHJ4*02     7    --------------------------------------------------------------------------................  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_3074   361  GGGAACCCTGGTCACCGTCTCCTCAG  386
J  100.0% (42/42)   IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40183344


Query= Query_265953

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           333     1e-93
IGHD6-13*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTT	TATAACAGCAGTTGG	GTGCTCGA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTTATAACAGCAGTTGGGTGCTCGATGACTTC	ARDFYNSSWVLDDF	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	51	0	0	100
CDR2-IMGT	102	125	24	23	1	0	95.8
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	233	223	10	0	95.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  R  I  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 
                    Query_3075   15   TGTGCAGCCTCTGGATTCACCTTCAGAATCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATT  104
V  95.7% (223/233)  IGHV3-21*01  64   ..........................T.G.............................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  S  T  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  R  S  L  Y  L 
                    Query_3075   105  AGTAGTAGTACTAGTTACATATATTATGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAGATCACTGTATCTG  194
V  95.7% (223/233)  IGHV3-21*01  154  ..........G............C..C.................................................AC............  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------------CDR3-IMGT--------------->   
                                       H  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  Y  N  S  S  W  V  L  D  D  F  W 
                    Query_3075   195  CACATGAACAACCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGATTTTTATAACAGCAGTTGGGTGCTCGATGACTTCTGG  284
V  95.7% (223/233)  IGHV3-21*01  244  ..A.......G........................G.................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  86.7% (13/15)    IGHD6-13*01  4    ---------------------------------------------------------....G......C...------------------  18
J  97.4% (38/39)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                   
                                       G  Q  G  T  L  V  T  V  S  S
                    Query_3075   285  GGCCAGGGAACCCTGGTCACCGTCTCCTC  313
J  97.4% (38/39)    IGHJ4*02     18   .............................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_67586

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACAGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACAGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3076   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.6% (225/243)  IGHV4-34*01  49   ................................G...T..................G...........................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  L  S  L  D  M  S  K  K 
                    Query_3076   91   TGGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGCGTCTCCTTATCATTAGACATGTCCAAGAAG  180
V  92.6% (225/243)  IGHV4-34*01  139  .............................C..................C..A.......A...A..A.....G......C.........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  V  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y 
                    Query_3076   181  CAGTTCTCCGTGAAGGTGACGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAACAGTAAAGGGGGTTATTACTGTCTAC  270
V  92.6% (225/243)  IGHV4-34*01  229  .........C.....C...GC..........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  20   --------------------------------------------------------------------------..........------  29

                                      -------------------->                                 
                                       Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3076   271  CAGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  100.0% (40/40)   IGHJ6*02     23   --------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_265951

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD1-26*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCATACGCC	GTGGGAG	GAAGGGATACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATACGCCGTGGGAGGAAGGGATACCCCTTGACTAC	AKDHTPWEEGIPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  L  S  R  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3077   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCATGCTTAGCAGATTTGCCATGAGTTGGGTCCGCCAGGCCCCTGGGAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-23*01  47   ............................T.......CCT.......C.A.........C..............T..A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  R  S  G  D  N  T  Y  Y  A  D  S  L  K  G  Q  F  S  I  S  R  D  S  S  
                    Query_3077   91   AGTGGGTCTCAGGTATCAGCAGAAGTGGTGATAACACATATTATGCAGACTCCTTGAAGGGCCAGTTCTCCATCTCCAGAGACAGTTCCA  180
V  90.8% (227/250)  IGHV3-23*01  137  ............C...T..TG.T.......G..G......C..C.........G.........G....A...............A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  H  T  P  W  E  E  
                    Query_3077   181  AGAACACGCTGTATCTGCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCATACGCCGTGGGAGGAAG  270
V  90.8% (227/250)  IGHV3-23*01  227  ......................G...............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD1-26*01  7    -------------------------------------------------------------------------------.......----  13

                                      ---------------->                                  
                                      G  I  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3077   271  GGATACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_321289

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           361     4e-102
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	237	6	0	97.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  Y  C  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3078   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTACTGCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.5% (237/243)  IGHV4-59*01  49   .......................................A.........A........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3078   91   TGGATTGGGTATATCTATTACAGTGGGAATACCAACTATAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.5% (237/243)  IGHV4-59*01  139  ............................GC........C...................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_3078   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  97.5% (237/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3078   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_321280

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            411     5e-117
IGHD6-19*01                                                                                           27.6    8e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GAAGAG	ATAGCAGTGGCTGG	CTCGTCA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGAAGAGATAGCAGTGGCTGGCTCGTCAACTTTGACTAC	ARGRDSSGWLVNFDY	273	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	29	1	0	96.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	26	1	0	96.3
FR3-IMGT	159	272	114	108	6	0	94.7
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	271	8	0	97.1


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  T  S  A  A  W  N  W  
                    Query_3079   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCACCAGTGCTGCTTGGAACTGGA  90
V  97.1% (271/279)  IGHV6-1*01   26   .....................................................................A....................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  H  N  D  Y  A  I  S  V  K  
                    Query_3079   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGCATAATGATTATGCAATATCTGTCAAAA  180
V  97.1% (271/279)  IGHV6-1*01   116  ..............................................................T..............G.......G....  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  N  I  N  P  D  T  P  K  N  Q  F  S  L  H  L  N  S  V  P  P  E  D  T  A  V  Y  Y  
                    Query_3079   181  GTCGAATAAACATCAACCCAGACACACCCAAGAACCAGTTCTCCCTGCACCTGAACTCTGTGCCTCCCGAGGACACGGCTGTGTATTACT  270
V  97.1% (271/279)  IGHV6-1*01   206  .........C................T......................G............A...........................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-----------------CDR3-IMGT----------------->                                
                                      C  A  R  G  R  D  S  S  G  W  L  V  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3079   271  GTGCAAGAGGAAGAGATAGCAGTGGCTGGCTCGTCAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  349
V  97.1% (271/279)  IGHV6-1*01   296  .........----------------------------------------------------------------------  304
                                      C  A  R                                                                        
D  100.0% (14/14)   IGHD6-19*01  5    ---------------..............--------------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     4    ------------------------------------...........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_321283

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD2-15*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAGCGTT	AGGACATTGT	GTTAGAAGCACTTGCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGCGTTAGGACATTGTGTTAGAAGCACTTGCGACTACGGTATGGACGTC	ATALGHCVRSTCDYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	281	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_3080   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTA  90
V  97.9% (281/287)  IGHV5-51*01  6    ......................................................................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  H  P  G  D  S  D  T  R  Y  S  P
                    Query_3080   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCCATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  97.9% (281/287)  IGHV5-51*01  96   ..........................................................T............................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3080   181  GTCTTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (281/287)  IGHV5-51*01  186  ...C.........................................C....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  T  A  L  G  H  C  V  R  S  T  C  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T
                    Query_3080   271  CATGTATTACTGTGCGACAGCGTTAGGACATTGTGTTAGAAGCACTTGCGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCAC  360
V  97.9% (281/287)  IGHV5-51*01  276  .................-------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                           
D  90.0% (9/10)     IGHD2-15*01  1    ------------------------....T.....--------------------------------------------------------  10
J  100.0% (50/50)   IGHJ6*02     13   --------------------------------------------------........................................  52

                                                
                                        V  S  S 
                    Query_3080   361  CGTCTCCTCA  370
J  100.0% (50/50)   IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_321282

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           396     2e-112
IGHD3-3*01                                                                                            18.0    0.69  
IGHJ5*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATCACGGCCCGCTAGTGGTACG	GGTTATTAT	GGACCG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATCACGGCCCGCTAGTGGTACGGGTTATTATGGACCGAACTGCTTCGGCCCC	ARGSRPASGTGYYGPNCFGP	289	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	16	8	0	66.7
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	274	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  A  S  G  D  S  F  S 
                    Query_3081   1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGGCTTCAGGGGACTCCTTCAGT  90
V  92.9% (274/295)  IGHV1-69*01  1    ...G...................G...........................................A......T..A.G.A.......C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       G  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  I  P  I  L  G  S  A  N  H 
                    Query_3081   91   GGGTATGGAATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGTGATCATCCCTATCCTTGGTTCAGCAAACCAC  180
V  92.9% (274/295)  IGHV1-69*01  91   A.C....CT....G............................................G.............T.....A........T..  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  K  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_3081   181  GCACAGAAGTTCAAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGTTGAGCAGCCTGAGATCTGAAGAC  270
V  92.9% (274/295)  IGHV1-69*01  181  ............C.....................................................C...................G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  M  Y  Y  C  A  R  G  S  R  P  A  S  G  T  G  Y  Y  G  P  N  C  F  G  P  W  G  Q  G 
                    Query_3081   271  ACGGCCATGTATTACTGTGCGAGAGGATCACGGCCCGCTAGTGGTACGGGTTATTATGGACCGAACTGCTTCGGCCCCTGGGGCCAGGGA  360
V  92.9% (274/295)  IGHV1-69*01  271  ......G..................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (9/9)     IGHD3-3*01   20   ------------------------------------------------.........---------------------------------  28
J  95.9% (47/49)    IGHJ5*02     3    ---------------------------------------------------------------.....G....A................  29

                                                            
                                       T  L  V  T  V  S  S  
                    Query_3081   361  ACCCTGGTCACCGTCTCCTCAG  382
J  95.9% (47/49)    IGHJ5*02     30   ......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_321285

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           282     4e-78
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	217	27	6	86.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  G  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_3082   4    CCCTGGGACTCTCCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.8% (217/250)  IGHV4-34*01  50   .....TCC...A..........C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_3082   94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.8% (217/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_3082   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.8% (217/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_3082   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_321284

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           338     4e-95
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	107	7	0	93.9
Total	N/A	N/A	242	229	13	0	94.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  G  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3083   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACGTTGAGTGGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.6% (229/242)  IGHV3-33*03  47   .....................................C..C...A.C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_3083   91   AGTGGGTGGCAGTTATATGGTATGATGGAATTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCA  180
V  94.6% (229/242)  IGHV3-33*03  137  ..............................G....................................................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_3083   181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCG  270
V  94.6% (229/242)  IGHV3-33*03  227  .......G....A......A..............................G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  90.9% (10/11)    IGHD6-13*01  7    -------------------------------------------------------------------....G......------------  17
J  100.0% (46/46)   IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3083   271  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (46/46)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_321287

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         352     3e-99
IGHD2-15*01                                                                                           18.0    0.64 
IGHJ6*02                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCACCTT	TATTGTAGT	TATGCCAGTATCGGCTGCTTGACCGGATGTTGCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGACCACCTTTATTGTAGTTATGCCAGTATCGGCTGCTTGACCGGATGTTGCCACTACTACGGTATGGACGTC	VRDHLYCSYASIGCLTGCCHYYGMDV	243	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	56	27	26	1	0	96.3
FR2-IMGT	57	107	51	51	0	0	100
CDR2-IMGT	108	128	21	21	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	247	236	11	0	95.5


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  R  L  S  C  A  V  S  G  Y  S  V  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  
                    Query_3084     4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTTACTCCGTCAGCAGTGGTTACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTGG  93
V  95.5% (236/247)  IGHV4-38-2*02  50   .....TCC...A.....A.................A......................................................  139
                                           L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  
                    Query_3084     94   AGTGGATTGGGAGTATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGA  183
V  95.5% (236/247)  IGHV4-38-2*02  140  ......................................................................A...................  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><------------------------------
                                        N  Q  F  S  L  N  L  R  S  M  T  A  A  D  T  A  V  Y  Y  C  V  R  D  H  L  Y  C  S  Y  A  
                    Query_3084     184  ACCAGTTCTCCCTGAACCTGAGGTCTATGACCGCCGCAGACACGGCCGTGTATTACTGTGTGAGAGACCACCTTTATTGTAGTTATGCCA  273
V  95.5% (236/247)  IGHV4-38-2*02  230  ................G.....C...G.................................C......-----------------------  296
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (9/9)     IGHD2-15*01    5    --------------------------------------------------------------------------.........-------  13

                                        ----CDR3-IMGT--------------------------------->                                 
                                        S  I  G  C  L  T  G  C  C  H  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3084     274  GTATCGGCTGCTTGACCGGATGTTGCCACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  353
J  100.0% (53/53)   IGHJ6*02       10   ---------------------------.....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_342232

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD3-22*01                                                                                           37.2    9e-07
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCTT	CTATGATAGCAGTGGTTATTAC	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCTTCTATGATAGCAGTGGTTATTACCACTTTGACTAT	VVFYDSSGYYHFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	240	1	1	0	0	100
Total	N/A	N/A	237	220	17	0	92.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  A  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_3085   4    CCCTGAGACTCTCCTGTACTGTGTCTGGTGCCGCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  92.8% (220/237)  IGHV4-59*01  50   .....TCC...A....C.....C.......G.T.........................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_3085   94   GGATTGGTTATATCTATCACAGTGGGACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAACC  183
V  92.8% (220/237)  IGHV4-59*01  140  .......G.........T.........G...............C.............................A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  F  Y  D  S  S  G  Y  Y  H  
                    Query_3085   184  AGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGTGGTCTTCTATGATAGCAGTGGTTATTACCACT  273
V  92.8% (220/237)  IGHV4-59*01  230  ..................GC..........................G..T.......---------------------------------  286
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                                   
D  95.5% (21/22)    IGHD3-22*01  7    ----------------------------------------------------------------.........T............----  28
J  95.6% (43/45)    IGHJ4*02     4    ---------------------------------------------------------------------------------------...  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_3085   274  TTGACTATTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  315
J  95.6% (43/45)    IGHJ4*02     7    .......C.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_136369

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         300     9e-84
IGHD3-9*01                                                                                            14.1    8.7  
IGHJ2*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGACCGATAC	TGACTGG	GGTGGTCACACAGGGCTCTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACCGATACTGACTGGGGTGGTCACACAGGGCTCTTCTGGTACTTCGATCTC	AKTDTDWGGHTGLFWYFDL	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	218	26	0	89.3


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  V  V  S  G  Y  S  I  N  N  G  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  L 
                    Query_3086     1    ACCCTGTCCCTCACCTGCGTTGTGTCTGGTTACTCCATCAACAATGGTTACTACTGGGGCTGGCTCCGGCAGCCCCCAGGAAAGGGGCTG  90
V  89.3% (218/244)  IGHV4-38-2*01  49   ...................C...C................G..G...................A................G.........  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  V  Y  H  R  G  D  A  Y  Y  N  P  S  L  K  S  R  V  T  V  S  M  D  T  S  S 
                    Query_3086     91   GAGTGGATTGGGAGTGTCTATCATCGCGGGGACGCGTACTACAATCCGTCCCTCAAGAGTCGAGTCACCGTCTCAATGGACACGTCCAGT  180
V  89.3% (218/244)  IGHV4-38-2*01  139  ...............A........A.T...AG.A.C........C........................A.A...G.A..........AG  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                         N  Q  V  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  T  D  T  D  W  G  G  H 
                    Query_3086     181  AATCAGGTCTCCCTGAGCCTGAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAAGACCGATACTGACTGGGGTGGTCAC  270
V  89.3% (218/244)  IGHV4-38-2*01  229  ..C...T.........AG.....C...............................A........--------------------------  292
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-9*01     15   --------------------------------------------------------------------------.......---------  21

                                        MGT----------------------->                                  
                                         T  G  L  F  W  Y  F  D  L  W  G  R  G  T  L  A  T  V  S  S  
                    Query_3086     271  ACAGGGCTCTTCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGCCACTGTCTCCTCAG  331
J  98.0% (49/50)    IGHJ2*01       4    -----------...................................T..............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_344233

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           422     2e-120
IGHD5-12*01                                                                                           16.1    2.6   
IGHJ2*01                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAC	GGATGAGAGA	TGGCTACAATT	TTGTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACGGATGAGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTC	ATRMRDGYNFVDWYFDL	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	295	7	6	1	0	85.7
Total	N/A	N/A	294	282	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  N  F  A  
                    Query_3087   2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAACTTTGCCA  91
V  95.9% (282/294)  IGHV5-51*01  2    ....G.....G..........................................................G...........G....A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_3087   92   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACA  181
V  95.9% (282/294)  IGHV5-51*01  92   G...................................................................................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  H  W  S  S  L  Q  A  S  D  
                    Query_3087   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCACTGGAGTAGCCTCCAGGCCTCGGACA  271
V  95.9% (282/294)  IGHV5-51*01  182  ................................................................G.....C.....GA............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  M  Y  Y  C  A  T  R  M  R  D  G  Y  N  F  V  D  W  Y  F  D  L  W  G  R  G  T  L  V  
                    Query_3087   272  CCGCCATGTATTACTGTGCGACACGGATGAGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCA  361
V  95.9% (282/294)  IGHV5-51*01  272  .....................G..------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  90.9% (10/11)    IGHD5-12*01  11   ----------------------------------.......G...---------------------------------------------  21
J  100.0% (51/51)   IGHJ2*01     3    ---------------------------------------------------.......................................  41

                                                  
                                      T  V  S  S  
                    Query_3087   362  CTGTCTCCTCAG  373
J  100.0% (51/51)   IGHJ2*01     42   ............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_342231

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-28*01                                                                                           364     5e-103
IGHD1-26*01                                                                                           14.1    8.2   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-28*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAA	TTGCATCGGTCGCGC	GTGGGAG	T	TACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGCATCGGTCGCGCGTGGGAGTTACGTTGACTAC	ARIASVARGSYVDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	112	2	0	98.2
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  N  N  W  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_3088   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCATCAGCAGTAATAACTGGTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGACTG  90
V  97.2% (240/247)  IGHV4-28*01  49   ..............................................G...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  S  N  W  W  G  W  I  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  C  I  G  S  I  S  Y  T  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 
                    Query_3088   91   GAGTGCATTGGGTCCATCTCTTATACTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAG  180
V  97.2% (240/247)  IGHV4-28*01  139  .....G.......A.....A.....G................................................................  228
                                       E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  R  S  V  T  A  V  D  T  A  V  Y  F  C  A  R  I  A  S  V  A  R  G  S 
                    Query_3088   181  AACCAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGTGGACACGGCCGTGTATTTCTGTGCGAGAATTGCATCGGTCGCGCGTGGGAGT  270
V  97.2% (240/247)  IGHV4-28*01  229  .......................C...............................A...........-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  V  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD1-26*01  7    ----------------------------------------------------------------------------------.......-  13

                                      ----------->                                  
                                       Y  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3088   271  TACGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.8% (45/46)    IGHJ4*02     3    ...T..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_61115

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           332     4e-93
IGHD2-21*02                                                                                           12.2    34   
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGGAAATCCAGGATCGAACCCTGA	GACTGC	AAGTTTTTAGTTGGCTAAAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGGAAATCCAGGATCGAACCCTGAGACTGCAAGTTTTTAGTTGGCTAAAGTAC	AREGEIQDRTLRLQVFSWLKY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3089   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-33*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  G  I  A  R  Y  E  A  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3089   91   AGTGGGTTGGAATTGCACGGTATGAAGCAAGTAATACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATATCCAGAGACAATTCCA  180
V  92.4% (231/250)  IGHV3-33*01  137  .......G.C.G..AT.T.......T.G........A......T.............................C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      R  K  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  M  Y  Y  C  A  R  E  G  E  I  Q  D  R  
                    Query_3089   181  GGAAGACCCTATATCTGCAAATGAACAGCCTCAGAGCCGATGACACGGCTATGTATTACTGTGCGAGAGAGGGGGAAATCCAGGATCGAA  270
V  92.4% (231/250)  IGHV3-33*01  227  A...C..G..G....................G........G.........G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      DR3-IMGT-------------------------->                                  
                                      T  L  R  L  Q  V  F  S  W  L  K  Y  W  G  Q  G  T  L  V  T  A  S  S  
                    Query_3089   271  CCCTGAGACTGCAAGTTTTTAGTTGGCTAAAGTACTGGGGCCAGGGAACCCTGGTCACCGCCTCCTCAG  339
D  100.0% (6/6)     IGHD2-21*02  17   ------......---------------------------------------------------------  22
J  97.3% (36/37)    IGHJ4*02     12   --------------------------------............................T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_136360

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         360     1e-101
IGHD3-22*01                                                                                           48.8    3e-10 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	AC	TTACTATGATAGTAGTGGTTATTAC	CTTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACTTACTATGATAGTAGTGGTTATTACCTTAACTACTTTGACCAC	ARTYYDSSGYYLNYFDH	246	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  R  V  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_3090     4    CCCTGAGACTCTCCTGCGCTGTCTCTCGTGTCTCCATCAGAAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  96.4% (239/248)  IGHV4-30-4*01  50   .....TCC...A.....A........G...G.........C.......A.........................................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_3090     94   TGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCA  183
V  96.4% (239/248)  IGHV4-30-4*01  140  ..........................................................................................  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  Y  Y  D  S  S  G  
                    Query_3090     184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAACTTACTATGATAGTAGTGGTT  273
V  96.4% (239/248)  IGHV4-30-4*01  230  ....................................................................----------------------  297
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (25/25)   IGHD3-22*01    4    ----------------------------------------------------------------------....................  23

                                        GT-------------------->                                  
                                        Y  Y  L  N  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3090     274  ATTACCTTAACTACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (25/25)   IGHD3-22*01    24   .....----------------------------------------------------  28
J  97.9% (47/48)    IGHJ4*02       1    ---------...........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_262630

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           224     8e-61
IGHD2-8*01                                                                                            12.2    34   
IGHJ6*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CGCTCTGGAGGGGGCCTCGGGACAATCTTA	TAATGG	ACGACGGGGGATTT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCGCTCTGGAGGGGGCCTCGGGACAATCTTATAATGGACGACGGGGGATTTTGGACGTC	AALEGASGQSYNGRRGILDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	42	9	0	82.4
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	86	28	0	75.4
CDR3-IMGT (germline)	244	245	2	2	0	0	100
Total	N/A	N/A	245	194	51	0	79.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  G  N  T  H  Y  W  G  W  L  R  H  S  P  G  K  G 
                    Query_3091   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATGAGCGGCAATACTCACTATTGGGGCTGGCTTCGCCACTCCCCGGGGAAGGGA  90
V  79.2% (194/245)  IGHV4-39*01  49   .............................T........C...A.T.G..G.T....C.........A.C.....GC....A........G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  A  V  S  S  G  R  S  T  S  Y  N  P  S  L  G  G  R  V  S  I  S  L  G  P  S 
                    Query_3091   91   CTGGAGTGGATTGGGGCCGTCTCTTCTGGACGGAGCACCTCCTACAACCCGTCCCTCGGGGGTCGTGTCTCCATATCTCTAGGTCCGTCC  180
V  79.2% (194/245)  IGHV4-39*01  139  ...............AGTA...A..A.A.TG.........A................AA.A....A...A.......CG...ACA.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       R  N  Q  F  S  L  D  L  R  S  L  T  A  A  N  T  S  I  Y  Y  C  A  A  L  E  G  A  S  G  Q 
                    Query_3091   181  AGAAATCAGTTCTCCCTGGATTTGAGGTCCCTGACCGCCGCAAACACTTCAATCTACTATTGTGCCGCTCTGGAGGGGGCCTCGGGACAA  270
V  79.2% (194/245)  IGHV4-39*01  229  .AG..C............A.GC....C..TG...........G....GG.TG.G..T..C.....-------------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      DR3-IMGT------------------------>                                 
                                       S  Y  N  G  R  R  G  I  L  D  V  W  G  Q  G  I  N  V  I  V  S  S 
                    Query_3091   271  TCTTATAATGGACGACGGGGGATTTTGGACGTCTGGGGCCAAGGGATCAACGTCATCGTCTCGTCA  336
D  100.0% (6/6)     IGHD2-8*01   13   -----......-------------------------------------------------------  18
J  87.8% (36/41)    IGHJ6*02     22   -------------------------.....................C..CG....C......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_136363

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD6-13*01                                                                                           14.1    9.8   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGCG	GCAACACCTGGTA	TCGAGATTCTCAGGCCGGCAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGCGGCAACACCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGAC	ARHSGNTWYRDSQAGIYFDD	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  G  G  Y
                    Query_3092   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCCCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCGGCTA  90
V  94.8% (276/291)  IGHV5-51*01  6    .............................................T....................................AC.A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_3092   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAACCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ......................................................................................G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  R  S  L  G  T  A  Y  L  Q  W  P  S  L  K  A  S  D  T  A
                    Query_3092   181  GTCCTTTCAAGGACAGGTCACCATCTCAGTCGACAGGTCCCTCGGAACCGCCTACCTGCAGTGGCCCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  ......C.....C................C.....A....A..A.C..................AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  Y  C  A  R  H  S  G  N  T  W  Y  R  D  S  Q  A  G  I  Y  F  D  D  W  G  Q  G  T  L
                    Query_3092   271  CATGTACTACTGTGCGAGACACAGCGGCAACACCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGACTGGGGCCAGGGAACCCT  360
V  94.8% (276/291)  IGHV5-51*01  276  ......T..............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  84.6% (11/13)    IGHD6-13*01  8    --------------------------...G..G......---------------------------------------------------  20
J  95.7% (45/47)    IGHJ4*02     2    ------------------------------------------------------------......T...T...................  31

                                                       
                                        V  T  V  S  S  
                    Query_3092   361  GGTCACCGTCTCCTCAG  377
J  95.7% (45/47)    IGHJ4*02     32   .................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_136364

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           388     5e-110
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACAGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	267	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  L  T  T  Y
                    Query_3093   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCCTTACCACCTA  90
V  93.4% (267/286)  IGHV5-51*01  6    ..............................A...................................T............T......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  Q  G  L  E  L  M  G  L  I  Y  P  G  D  S  D  T  W  Y  S  P
                    Query_3093   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCAAGGCCTGGAGTTGATGGGGCTCATCTATCCTGGTGACTCTGATACTTGGTACAGCCC  180
V  93.4% (267/286)  IGHV5-51*01  96   ......................A........A............G.......A.........................CA.A........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  T  S  A  Y  L  Q  W  T  T  L  K  A  S  D  T  A
                    Query_3093   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCACCTCCGCCTACCTGCAGTGGACCACCCTGAAGGCCTCGGACACCGC  270
V  93.4% (267/286)  IGHV5-51*01  186  ....................C...................A...G.A..................G..G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3093   271  CATTTACTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACAGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  353
V  93.4% (267/286)  IGHV5-51*01  276  ...G..T.........-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------.................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_262637

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGTCGTATTCTTT	TGATAGTAGTGGT	CAGAGTCCCGCG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGTCGTATTCTTTTGATAGTAGTGGTCAGAGTCCCGCGTACTTTGACTAC	ARDLSYSFDSSGQSPAYFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3094   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  C  I  S  G  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3094   91   AGTGGGTCTCATGCATCAGTGGTGGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  ............C...T...A..A..................................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  S  Y  S  F  D  
                    Query_3094   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGTCGTATTCTTTTGATA  270
V  98.4% (246/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD3-22*01  10   -------------------------------------------------------------------------------------.....  14

                                      R3-IMGT------------------------>                                  
                                      S  S  G  Q  S  P  A  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_3094   271  GTAGTGGTCAGAGTCCCGCGTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  336
D  100.0% (13/13)   IGHD3-22*01  15   ........----------------------------------------------------------  22
J  97.8% (45/46)    IGHJ4*02     3    --------------------........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_136366

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	273	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_3095   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  95.5% (273/286)  IGHV5-51*01  6    ..................................................A...............T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_3095   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCTTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGACACCAGATACAGTCC  180
V  95.5% (273/286)  IGHV5-51*01  96   ......................A.......G......C......G..............................T...........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  N  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_3095   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  95.5% (273/286)  IGHV5-51*01  186  ....................C...................A...G.......................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        M  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  P  G  T  L  V  T  V  S  S 
                    Query_3095   271  CATGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCA  352
V  95.5% (273/286)  IGHV5-51*01  276  ................------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                   
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     8    ------------------------------------------..............A.........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_262635

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*02                                                                                            382     4e-108
IGHD3-3*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAC	TT	GTATTACGATTCTCGGAATGATTATTA	CTACCACTTTCG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACACACTTGTATTACGATTCTCGGAATGATTATTACTACCACTTTCGCTTTGACCAC	THLYYDSRNDYYYHFRFDH	263	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	27	3	0	90
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	148	21	20	1	0	95.2
FR3-IMGT	149	262	114	108	6	0	94.7
CDR3-IMGT (germline)	263	268	6	5	1	0	83.3
Total	N/A	N/A	268	256	12	0	95.5


Alignments

                                     <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  L  G  V  G  W  I  R
                    Query_3096  1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGATTCTCACTCAGTACTAGTGGATTGGGTGTGGGCTGGATCCG  90
V  95.5% (256/268)  IGHV2-5*02  30   ................................................G...........C.........G...................  119
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                     -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                       Q  P  P  G  K  A  L  E  W  L  A  L  V  Y  W  D  D  D  K  R  Y  S  P  S  L  K  N  R  L  T
                    Query_3096  91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTCGCACTCGTTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAAAATAGGCTCAC  180
V  95.5% (256/268)  IGHV2-5*02  120  ..............................T......A........................................G.GC........  209
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                     ---------------------FR3-IMGT----------------------------------------------------><-------
                                       I  T  K  D  T  P  K  D  Q  V  V  L  T  M  T  N  V  D  P  V  D  T  A  T  Y  Y  C  T  H  L
                    Query_3096  181  CATCACCAAGGACACCCCCAAAGACCAGGTGGTCCTTACAATGACCAACGTGGACCCTGTGGACACAGCCACATATTACTGTACACACTT  270
V  95.5% (256/268)  IGHV2-5*02  210  ................T.....A..........................A................................G.....--  297
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                     ----------------CDR3-IMGT----------------------->                                  
                                       Y  Y  D  S  R  N  D  Y  Y  Y  H  F  R  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3096  271  GTATTACGATTCTCGGAATGATTATTACTACCACTTTCGCTTTGACCACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  353
D  85.2% (23/27)    IGHD3-3*01  1    ...........T.T...G..G......--------------------------------------------------------  27
J  95.5% (42/44)    IGHJ4*02    5    ---------------------------------------.......T.............A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_76348

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           343     2e-96
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CAC	TATTCCTATGGTTCGAGGAGT	GC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACACTATTCCTATGGTTCGAGGAGTGCTTGACTTT	AKDTIPMVRGVLDF	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	126	24	22	2	0	91.7
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  I  T  F  S  S  H  A  M  S  W  A  R  Q  A  P  G  K  G  L  E  
                    Query_3097   2    CCCTGTCCCTCACCTGCGCAGCCTCTGGAATCACCTTTAGCAGCCATGCCATGAGCTGGGCCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  94.3% (233/247)  IGHV3-23*01  50   .....AGA...T....T............T..............T...............T.............................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  A  I  S  G  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_3097   92   GGGTCTCAGCTATTAGTGGTAGTGGTGGCACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCAAGA  181
V  94.3% (233/247)  IGHV3-23*01  140  ............................T.G...................................................T.......  229
                                      W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  H  M  S  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  D  T  I  P  M  V  R  G  
                    Query_3097   182  ACACGCTGTATCTGCACATGAGCAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGACACTATTCCTATGGTTCGAGGAG  271
V  94.3% (233/247)  IGHV3-23*01  230  ................A....A.........................G...................-----------------------  296
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                          
D  90.5% (19/21)    IGHD3-10*01  2    ----------------------------------------------------------------------....A..........G....  21

                                      ---------->                                  
                                      V  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3097   272  TGCTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  90.5% (19/21)    IGHD3-10*01  22   .--------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    ---......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_76349

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            327     9e-92
IGHD3-16*01                                                                                           39.1    3e-07
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCT	TTACGTTTGGGGGAGTTATG	G	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTTTACGTTTGGGGGAGTTATGGACTCCTTTGACTAC	ARGLFTFGGVMDSFDY	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	228	19	0	92.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  G  V  S  G  G  S  I  S  S  D  N  W  W  G  W  V  R  Q  P  P  G  K  G  L 
                    Query_3098   1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGTGGCTCCATCAGCAGTGATAACTGGTGGGGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  92.3% (228/247)  IGHV4-4*02   49   ...................C.........................AG..........A................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  Y  I  Y  Y  R  G  S  T  Y  S  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_3098   91   GAGTGGATTGGGTACATCTATTACCGTGGGAGCACGTACTCCAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAG  180
V  92.3% (228/247)  IGHV4-4*02   139  ............G.A......C.TA..........CA...A........................C................A...C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  Q  L  S  V  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  F  T  F  G  G  V 
                    Query_3098   181  AACCAGTTGTCCGTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTATTGTGCGAGAGGCCTCTTTACGTTTGGGGGAGTT  270
V  92.3% (228/247)  IGHV4-4*02   229  ........C...C...................C.......................C..........-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (20/20)   IGHD3-16*01  10   -------------------------------------------------------------------------.................  26

                                      ----------------->                                  
                                       M  D  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3098   271  ATGGACTCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (20/20)   IGHD3-16*01  27   ...-------------------------------------------------  29
J  97.9% (47/48)    IGHJ4*02     1    ----...A............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_123036

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-20*01                                                                                           347     7e-98
IGHD3-10*01                                                                                           10.3    116  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-20*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TGAGGTC	GAGTT	C	GCTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATGAGGTCGAGTTCGCTCTTGATATC	ARDEVEFALDI	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  S  S  G  F  T  F  S  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3099   1    GGTCCCTGAGACTCTCCTGTGCAAGCTCCGGATTCACCTTTAGCGATTATGGCATGAGTTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-20*01  47   .......................GC...T............GAT..............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  N  G  V  N  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3099   91   AGTGGGTCTCTGGTATTAATTGGAATGGAGTTAATACAGGTTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-20*01  137  ............................T.G..GC.......................................................  226
                                      E  W  V  S  G  I  N  W  N  G  G  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  T  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  E  V  E  F  A  L  
                    Query_3099   181  AGAACTCCCTGTATCTGCAAATGACCAGTCTGAGAGCCGAGGACACGGCCTTGTATTACTGTGCGAGGGATGAGGTCGAGTTCGCTCTTG  270
V  94.4% (236/250)  IGHV3-20*01  227  ........................A...............................C..........A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  19   -----------------------------------------------------------------------------.....--------  23
J  93.3% (42/45)    IGHJ3*02     5    -----------------------------------------------------------------------------------...T...  11

                                      ---->                                 
                                      D  I  W  G  Q  G  T  K  V  T  V  S  S 
                    Query_3099   271  ATATCTGGGGCCAAGGGACAAAGGTCACCGTCTCCTCA  308
J  93.3% (42/45)    IGHJ3*02     12   .....................T............T...  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_123037

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD1-1*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AATTTGCGT	CTGGAGCGAC	GTTCTCAACCTTTTG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAATTTGCGTCTGGAGCGACGTTCTCAACCTTTTGACTTCTTTGACTCG	AKNLRLERRSQPFDFFDS	239	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	47	4	0	92.2
CDR2-IMGT	101	124	24	22	2	0	91.7
FR3-IMGT	125	238	114	108	6	0	94.7
CDR3-IMGT (germline)	239	244	6	6	0	0	100
Total	N/A	N/A	230	216	14	0	93.9


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  R  F  A  V  S  W  V  R  Q  A  P  G  K  G  L  E  W  L  S  T  I  
                    Query_3100   15   GTGCAGCCTCTGGATTCACCTTTAGCAGGTTTGCCGTGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGGAGTGGCTCTCAACTATTA  104
V  93.9% (216/230)  IGHV3-23*01  65   ............................C.A....A.............C...........................G.....G......  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  D  S  T  Y  Y  I  D  S  V  K  G  R  F  T  I  S  R  D  N  S  Q  N  T  L  Y  L  
                    Query_3100   105  GTGGTAGTGGTGACAGCACATACTACATTGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCCAGAATACGCTGTATCTGC  194
V  93.9% (216/230)  IGHV3-23*01  155  ............GT............GCA..........................................A....C.............  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><----------------------CDR3-IMGT--------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  N  L  R  L  E  R  R  S  Q  P  F  D  F  
                    Query_3100   195  AAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAAAATTTGCGTCTGGAGCGACGTTCTCAACCTTTTGACTTCT  284
V  93.9% (216/230)  IGHV3-23*01  245  ..................................A...............----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  90.0% (9/10)     IGHD1-1*01   8    -----------------------------------------------------------.....A....---------------------  17
J  89.6% (43/48)    IGHJ4*02     1    ------------------------------------------------------------------------------------...A..  6

                                      ------->                                  
                                      F  D  S  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_3100   285  TTGACTCGTGGGGCCAGGGATCTCTGGTCACCGTCTCCTCAG  326
J  89.6% (43/48)    IGHJ4*02     7    ......AC............A.C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_123035

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD6-6*01                                                                                            14.1    9.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTC	ATTREQLVPIFDF	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	70	1	0	98.6
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	106	8	0	93
CDR3-IMGT (germline)	291	294	4	4	0	0	100
Total	N/A	N/A	288	269	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  L  S  S  
                    Query_3101   7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATTTCCTGTAAGGGTTCTGGATACAGATTAAGCAGTT  96
V  93.4% (269/288)  IGHV5-51*01  5    .......................................................C.......................C..T.C...C.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  A  Y  P  G  D  S  E  T  K  Y  S  
                    Query_3101   97   ATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCGCCTATCCTGGTGACTCTGAGACCAAATACAGCC  186
V  93.4% (269/288)  IGHV5-51*01  95   .C.......G..........................................G...AT..................T....G........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  E  G  Q  V  T  I  S  A  D  K  A  S  G  T  A  F  L  Q  W  D  S  L  K  A  S  D  T  
                    Query_3101   187  CGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGGCCAGCGGCACCGCCTTCCTGCAGTGGGACAGCCTGAAGGCCTCGGACACCG  276
V  93.4% (269/288)  IGHV5-51*01  185  ........C.............................T...T.A.........A..........AG.......................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><--------------CDR3-IMGT-------------->                                  
                                      A  M  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_3101   277  CCATGTATTACTGTGCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  363
V  93.4% (269/288)  IGHV5-51*01  275  ..................---------------------------------------------------------------------  292
                                      A  M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   --------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    --------------------------------------------.......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_123032

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           311     4e-87
IGHD4-17*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGTAGGG	ACGGTGACTAC	GGGGCGGG	CTTAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCGTAGGGACGGTGACTACGGGGCGGGCTTAGAGTAC	ARDRRDGDYGAGLEY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	21	24	4	4	0	0	100
CDR1-IMGT	25	48	24	20	4	0	83.3
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	24	0	0	100
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	225	212	13	0	94.2


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  A  L  S  T  S  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_3102   21   GTCTGGATTCGCCTTAAGTACCTCTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  110
V  94.2% (212/225)  IGHV3-33*01  72   ..........A....C....G..A..................................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  E  P  K  N  T  L  H  L  Q  M  N
                    Query_3102   111  TGGAAGTAATAAATACTATGCAGATTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGAACCCAAGAACACGCTGCATCTGCAGATGAA  200
V  94.2% (212/225)  IGHV3-33*01  162  ........................C.................................A.TT..............T.......A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------CDR3-IMGT----------------->        
                                        S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  R  R  D  G  D  Y  G  A  G  L  E  Y  W  G  Q
                    Query_3102   201  CAGCCTGAGGGCCGACGACACGGCTGTCTATTACTGTGCGAGAGACCGTAGGGACGGTGACTACGGGGCGGGCTTAGAGTACTGGGGCCA  290
V  94.2% (212/225)  IGHV3-33*01  252  .........A.....G...........G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (11/11)   IGHD4-17*01  6    -----------------------------------------------------...........--------------------------  16
J  95.5% (42/44)    IGHJ4*02     5    ------------------------------------------------------------------------...T..C...........  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_3102   291  GGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.5% (42/44)    IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_123033

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           355     3e-100
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_3103   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGCC  93
V  96.0% (237/247)  IGHV4-31*02  50   .....TCC...A.....................C......C.............................C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_3103   94   TGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  96.0% (237/247)  IGHV4-31*02  140  ....G.........T.C.........................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  
                    Query_3103   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCG  273
V  96.0% (237/247)  IGHV4-31*02  230  ...................................................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  100.0% (51/51)   IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3103   274  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (51/51)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_6360

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            329     3e-92
IGHD1-26*01                                                                                           10.3    121  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTGCCAT	GGAGC	AATGGACCCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTGCCATGGAGCAATGGACCCAATACTACTTTGACGCC	ARSAMEQWTQYYFDA	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  S  Y  W  M  T  W  V  R  Q  A  L  G  K  G  L  
                    Query_3104   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAGTAGTTATTGGATGACCTGGGTCCGCCAGGCTCTAGGTAAGGGGCTGG  90
V  92.3% (229/248)  IGHV3-7*01   47   .....................C........................C..........G.................C...G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  V  E  Y  Y  V  D  S  V  R  G  R  F  T  M  S  R  D  N  A  
                    Query_3104   91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGTGGAATACTACGTGGACTCTGTGAGGGGCCGATTCACCATGTCCAGAGACAACGCCA  180
V  92.3% (229/248)  IGHV3-7*01   137  ....................C............A.A.......T.............A...............C................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  S  V  S  L  Q  M  S  S  L  T  A  E  D  T  A  V  Y  Y  C  A  R  S  A  M  E  Q  W  T  
                    Query_3104   181  GGAACTCAGTCTCTCTGCAAATGAGCAGCCTGACAGCCGAGGACACGGCTGTATACTACTGTGCGAGATCTGCCATGGAGCAATGGACCC  270
V  92.3% (229/248)  IGHV3-7*01   227  A.......C.G.A...........A........G..................G..T............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  10   ----------------------------------------------------------------------------.....---------  14

                                      ---------------->                                
                                      Q  Y  Y  F  D  A  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3104   271  AATACTACTTTGACGCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
J  95.7% (44/46)    IGHJ4*02     1    ---...........TA.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_123031

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*03                                                                                           254     9e-70
IGHD1-26*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGTTCCAGG	GTGGGAG	GTTCTCGGGGACTA	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGTTCCAGGGTGGGAGGTTCTCGGGGACTAGACTCC	AGSRVGGSRGLDS	227	265	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	18	6	0	75
FR2-IMGT	41	91	51	45	6	0	88.2
CDR2-IMGT	92	112	21	17	4	0	81
FR3-IMGT	113	226	114	103	11	0	90.4
CDR3-IMGT (germline)	227	229	3	3	0	0	100
Total	N/A	N/A	216	189	27	0	87.5


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-----CDR2-I
                                       S  G  G  S  I  T  D  F  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  Y  I  G  Y  I  Y  Y  T 
                    Query_3105   14   TCTGGAGGCTCCATCACTGACTTCTACTGGACCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAATACATTGGCTATATCTATTACACT  103
V  87.5% (189/216)  IGHV4-59*03  73   .....T..........G.AGT.A........G..................A..............G.GG.....G.............G.  162
                                       S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S 

                                      MGT-----><----------------------------------------------------FR3-IMGT--------------------
                                       G  D  T  N  Y  N  P  S  L  R  G  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  N  S 
                    Query_3105   104  GGCGACACCAACTACAATCCCTCCCTCAGGGGTCGAGTCACCATATCCGTGGACACGTCGAAGAACCAATTCTCCCTGAAACTTAACTCT  193
V  87.5% (189/216)  IGHV4-59*03  163  ..GAG............C..........A.A................A..A........C....................G..G.G....  252
                                       G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S 

                                      --------------------------------><--------------CDR3-IMGT-------------->                  
                                       V  T  A  A  D  T  A  A  Y  Y  C  A  G  S  R  V  G  G  S  R  G  L  D  S  W  G  Q  G  I  L 
                    Query_3105   194  GTGACCGCTGCGGACACGGCCGCTTATTACTGTGCGGGTTCCAGGGTGGGAGGTTCTCGGGGACTAGACTCCTGGGGCCAGGGAATCCTG  283
V  87.5% (189/216)  IGHV4-59*03  253  ......................TG............------------------------------------------------------  288
                                       V  T  A  A  D  T  A  V  Y  Y  C  A                                                       
D  100.0% (7/7)     IGHD1-26*01  7    ---------------------------------------------.......--------------------------------------  13
J  92.5% (37/40)    IGHJ4*02     9    ------------------------------------------------------------------....A..............C....  32

                                                      
                                       V  T  I  S  S  
                    Query_3105   284  GTCACCATCTCCTCAG  299
J  92.5% (37/40)    IGHJ4*02     33   ......G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_216899

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           329     3e-92
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGGATACTTCCAGCAC	ARLGSYYASTGYGRDAGYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_3106   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  P  L  K  P  R  V  T  I  S  L  D  T  S  K  N 
                    Query_3106   91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCCCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*08  139  ...A....G......T.......T.....................T........AG............A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G 
                    Query_3106   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGT  270
V  93.0% (227/244)  IGHV4-59*08  229  .............A......C..........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  G  Y  F  Q  H  W  G  H  G  P  Q  V  A  V  S  S  
                    Query_3106   271  TATGGCCGAGACGCTGGATACTTCCAGCACTGGGGCCACGGCCCCCAGGTCGCCGTCTCCTCAG  334
J  90.4% (47/52)    IGHJ1*01     1    ------------....A.....................G...A...T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_6368

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-10*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	15	6	0	71.4
FR3-IMGT	147	260	114	106	8	0	93
CDR3-IMGT (germline)	261	265	5	5	0	0	100
Total	N/A	N/A	265	243	22	0	91.7


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  H  W  S  W  I  R  
                    Query_3107   1    CAGGACTGGTGAAGCCCTCGCAGACCCTGTCCCTCACTTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACCACTGGAGCTGGATCCGGC  90
V  91.7% (243/265)  IGHV4-59*01  26   ................T...G................C...........................AG....T..................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  F  Y  S  G  K  S  K  Y  N  P  S  L  K  S  R  V  T  
                    Query_3107   91   AGCCCCCCGGGAAGGGACTGGAGTGGATTGGATATATCTTCTACAGTGGCAAATCCAAGTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  91.7% (243/265)  IGHV4-59*01  116  .......A.......................G.......AT........G.GCA....C...............................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  K  Q  L  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  
                    Query_3107   181  TATCAGTAGACACATCCAAGAAGCAGTTGTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAG  270
V  91.7% (243/265)  IGHV4-59*01  206  .............G........C.....C.......A......C.........G................G..............-----  290
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A        
D  93.3% (14/15)    IGHD3-10*01  11   -----------------------------------------------------------------------------------------.  11

                                      -------CDR3-IMGT--------------->                                  
                                      G  S  G  N  Y  E  G  W  L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3107   271  GTTCGGGGAATTATGAGGGCTGGCTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  93.3% (14/15)    IGHD3-10*01  12   .........G....----------------------------------------------------  25
J  97.9% (46/47)    IGHJ5*02     5    -------------------....T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_123039

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     3e-90
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	242	26	6	88.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_3108   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.3% (242/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_3108   91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.3% (242/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_3108   181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.3% (242/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  A  A  V  S  V  S  S 
                    Query_3108   271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGGCCGCGGTCTCCGTCTCCTCA  359
V  88.3% (242/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  89.6% (43/48)    IGHJ6*02     15   -----------------------------------------.....T.......T.............A..A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_27321

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD2-2*02                                                                                            12.2    32    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCA	CTGGTATAC	TTACGTCAGCGGGGGATATG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTGGTATACTTACGTCAGCGGGGGATATGTTGACTAC	ARGHWYTYVSGGYVDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3109   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S 
                    Query_3109   91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGCTACCATATCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ................A.................G................................T......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  W  Y  T  Y  V 
                    Query_3109   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCACTGGTATACTTACGTC  270
V  97.6% (244/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (8/9)      IGHD2-2*02   22   --------------------------------------------------------------------------...C.....-------  30

                                      GT------------------>                                  
                                       S  G  G  Y  V  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_3109   271  AGCGGGGGATATGTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  325
J  97.6% (41/42)    IGHJ4*02     7    -------------.............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_27322

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           315     5e-88
IGHD4-17*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACGTAGGG	ACGGTGACTAC	GGGGCGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACGTAGGGACGGTGACTACGGGGCGGGCTTTGAGTAC	ARERRDGDYGAGFEY	230	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	21	3	0	87.5
FR3-IMGT	116	229	114	108	6	0	94.7
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	213	12	0	94.7


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  L  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  F  D
                    Query_3110   13   GTCTGGATTCACCTTAAGTAGATATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAATGGGTGGCAGTTATCTGGTTTGA  102
V  94.7% (213/225)  IGHV3-33*01  72   ...............C.....C............................................G..............A....A...  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  N  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  E  S  K  N  T  L  H  L  Q  M  N
                    Query_3110   103  TGGAAATAATAAATACTATGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACGAGTCCAAGAACACGCTGCATCTGCAAATGAA  192
V  94.7% (213/225)  IGHV3-33*01  162  .....G.................................A..................A.T...............T.............  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------CDR3-IMGT----------------->        
                                        S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  E  R  R  D  G  D  Y  G  A  G  F  E  Y  W  G  Q
                    Query_3110   193  CAGCCTGGGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGAACGTAGGGACGGTGACTACGGGGCGGGCTTTGAGTACTGGGGCCA  282
V  94.7% (213/225)  IGHV3-33*01  252  .......A...................G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (11/11)   IGHD4-17*01  6    -----------------------------------------------------...........--------------------------  16
J  97.7% (43/44)    IGHJ4*02     5    ------------------------------------------------------------------------......C...........  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_3110   283  GGGAACCCTGGTCACCGTCTCCTCAG  308
J  97.7% (43/44)    IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_27323

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           296     2e-82
IGHD1-20*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAACGATTA	TATAACGGGAA	TTCAGTCACAAGGGGTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAACGATTATATAACGGGAATTCAGTCACAAGGGGTGACTACGGTATGGACGTC	ARQRLYNGNSVTRGDYGMDV	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	245	217	28	0	88.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  V  S  T  N  F  V  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3111   1    GGTCCCTGCGACTCTCCTGTGCAGCCTCTGGGTTCAGTGTCAGTACCAATTTCGTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  88.6% (217/245)  IGHV3-53*01  47   ........A...........................CC.......G...C.A.A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  M  F  S  G  G  A  T  Y  Y  A  D  S  V  E  G  R  F  T  V  S  R  D  T  S  K  
                    Query_3111   91   AGTGGGTCTCAGTTATGTTTAGTGGTGGTGCCACCTACTACGCAGACTCCGTGGAGGGCCGATTCACCGTCTCCAGAGACACTTCCAAGA  180
V  88.6% (217/245)  IGHV3-53*01  137  ................T.A...C......AG...A..................A..............A............A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------------CDR3-
                                      N  S  L  D  L  E  M  N  N  L  R  V  D  D  T  A  V  Y  Y  C  A  R  Q  R  L  Y  N  G  N  S  
                    Query_3111   181  ACTCGTTGGATCTTGAGATGAATAACCTGAGAGTCGACGACACGGCCGTCTATTATTGTGCGAGACAACGATTATATAACGGGAATTCAG  270
V  88.6% (217/245)  IGHV3-53*01  227  ..A..C..T.....C.A.....C.G........C...G...........G.....C.........-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  90.9% (10/11)    IGHD1-20*01  3    --------------------------------------------------------------------------......T....-----  13

                                      IMGT------------------------>                                 
                                      V  T  R  G  D  Y  G  M  D  V  G  G  Q  G  T  T  V  T  V  S  S 
                    Query_3111   271  TCACAAGGGGTGACTACGGTATGGACGTCGGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  98.0% (49/50)    IGHJ6*02     13   ------------.................T................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_27324

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           282     3e-78
IGHJ6*02                                                                                              48.8    7e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TCTAGATGGCCCCAATGT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTAGATGGCCCCAATGTCTACTACTGGATGCACGTC	ARDLDGPNVYYWMHV	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	212	32	0	86.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  I  V  S  G  G  S  L  R  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_3112   4    CCCTGAGACTCTCCTGTATTGTCTCTGGTGGCTCCCTCCGTAGTTACTACTGGAGCTGGATCCGGCAACCCCCCGGGAAGGGGCTGGAAT  93
V  86.9% (212/244)  IGHV4-59*01  50   .....TCC...A....C.C................A..A............................G.....A........A.....G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  F  S  G  N  T  N  Y  N  P  S  R  K  G  R  V  N  I  A  G  D  T  S  Q  N  
                    Query_3112   94   GGATTGGCTATATTCATTTCAGTGGAAACACCAACTACAACCCCTCCCGCAAGGGTCGGGTCAACATTGCAGGAGACACGTCCCAGAACC  183
V  86.9% (212/244)  IGHV4-59*01  140  .......G.....CT...A......G.G....................T....A....A....C...AT...T..........A......  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  V  N  S  V  T  E  A  D  T  A  V  Y  Y  C  A  R  D  L  D  G  P  N  V  Y  Y  
                    Query_3112   184  AGTTCTCCCTGAAGGTGAACTCTGTTACCGAGGCGGACACGGCCGTGTATTATTGTGCGAGAGATCTAGATGGCCCCAATGTCTACTACT  273
V  86.9% (212/244)  IGHV4-59*01  230  ..............C...G......G....CT....................C...........--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  83.7% (41/49)    IGHJ6*02     11   ----------------------------------------------------------------------------------.......G  18

                                      ---------->                              
                                      W  M  H  V  W  G  P  G  T  A  V  I  V  S 
                    Query_3112   274  GGATGCACGTCTGGGGCCCAGGGACCGCGGTTATCGTTTCC  314
J  83.7% (41/49)    IGHJ6*02     19   .T...G............A.......A....C.C...C...  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_342239

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            442     2e-126
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	287	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_3113   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  98.6% (287/291)  IGHV1-2*04   6    ..................G.............AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_3113   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.6% (287/291)  IGHV1-2*04   96   ..........................................................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_3113   181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  98.6% (287/291)  IGHV1-2*04   186  ..........................................................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W  G  Q
                    Query_3113   271  CGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGGGGCCA  360
V  98.6% (287/291)  IGHV1-2*04   276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------------------....A...........................  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_3113   361  AGGGACCACGGTCACCGTCTCCTCA  385
J  98.2% (56/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_27326

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD1-26*01                                                                                           18.0    0.65  
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGTATGCCGTCC	TGGGAGCTCCTA	GT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTATGCCGTCCTGGGAGCTCCTAGTTGGTTCGACCCC	AKYAVLGAPSWFDP	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	268	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  E  P  G  E  S  L  R  I  S  C  R  G  S  G  Y  T  F  I  S  Y
                    Query_3114   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAGAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGCTCTGGGTACACCTTTATTAGTTA  90
V  93.4% (268/287)  IGHV5-51*01  6    ....................C..........A..................A...........A...T.....A....G.....CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  N  P
                    Query_3114   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGAGACCAGATACAACCC  180
V  93.4% (268/287)  IGHV5-51*01  96   C.......G...........................................A......................T..........G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  L  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  S  L  K  A  S  D  T  A
                    Query_3114   181  GTCCTTCCAAGGCCACGTCACCCTCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCACTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (268/287)  IGHV5-51*01  186  ...............G......A.....................G...............G.............................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  K  Y  A  V  L  G  A  P  S  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_3114   271  CATGTATTACTGTGCGAAGTATGCCGTCCTGGGAGCTCCTAGTTGGTTCGACCCCTGGGGCCAGGGAACCCTAGTCATCGTCTCCTCAG  359
V  93.4% (268/287)  IGHV5-51*01  276  .................------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                          
D  91.7% (11/12)    IGHD1-26*01  8    -----------------------------........A...------------------------------------------------  19
J  95.7% (44/46)    IGHJ5*02     6    -------------------------------------------.............................G....C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_27327

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*04                                                                                           332     3e-93
IGHD6-25*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*04	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	CGGGT	CAGCGGCT	GAAAGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGACGGGTCAGCGGCTGAAAGATTTGACAAG	ATDGSAAERFDK	249	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	102	12	0	89.5
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	234	22	0	91.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  T  Y  A  W  M  S  W  V  R  Q  T  P  G  K  G  L  
                    Query_3115   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACTTTCACTTACGCCTGGATGAGTTGGGTCCGCCAGACTCCAGGGAAGGGGCTGG  90
V  91.4% (234/256)  IGHV3-15*04  47   .......T................C.................G.A.............C............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  A  R  I  G  S  K  T  D  A  G  T  T  N  Y  A  K  P  V  K  G  R  F  T  I  S  R  D  
                    Query_3115   91   AGTGGGTTGCCCGTATTGGAAGCAAAACTGATGCTGGGACAACAAACTACGCTAAACCCGTGAAAGGCAGGTTCACCATCTCAAGAGATG  180
V  91.4% (234/256)  IGHV3-15*04  137  .........G........A..............G..........G........GC...............A...................  226
                                      E  W  V  G  R  I  E  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------CDR3-IMG
                                      D  S  K  N  M  L  Y  L  Q  M  N  S  L  K  I  E  D  T  G  V  Y  Y  C  A  T  D  G  S  A  A  
                    Query_3115   181  ATTCAAAAAATATGTTGTATCTGCAAATGAACAGCCTGAAGATCGAGGACACAGGCGTTTATTATTGTGCCACAGACGGGTCAGCGGCTG  270
V  91.4% (234/256)  IGHV3-15*04  227  ..........C.C.C.........................A.C...........C...G.....C...A.......--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (8/8)     IGHD6-25*01  9    ---------------------------------------------------------------------------------........-  16

                                      T------------>                                  
                                      E  R  F  D  K  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_3115   271  AAAGATTTGACAAGTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  318
J  93.0% (40/43)    IGHJ4*02     6    -----......T.C......................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_27329

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           329     3e-92
IGHD3-22*01                                                                                           21.8    0.040
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGAA	AGTGGTTATTA	N/A	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGAAAGTGGTTATTATGAAGCTTTTGATATG	ARSESGYYEAFDM	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  L  S  N  Y  D  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3116   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCCTCAGCAACTATGATATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.3% (229/248)  IGHV3-30*04  47   ...................................A..T....T.G.....C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  I  I  S  Y  D  G  G  N  K  N  Y  A  D  S  V  R  G  R  F  T  L  S  R  D  N  S  
                    Query_3116   91   AGTGGGTATCAATTATATCATATGATGGAGGAAATAAAAATTACGCAGACTCCGTGAGGGGCCGATTCACCTTGTCCAGAGACAATTCCA  180
V  92.3% (229/248)  IGHV3-30*04  137  .......GG..G.................A.T......T.C................A.............A.C................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  F  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  E  S  G  Y  Y  E  
                    Query_3116   181  AGAACACGCTGTTTCTGCAAATGAACAACCTGCGCGCTGAGGACACGGCTGTGTATTACTGTGCGAGATCGGAAAGTGGTTATTATGAAG  270
V  92.3% (229/248)  IGHV3-30*04  227  ............A..............G....A.A.................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-22*01  17   --------------------------------------------------------------------------...........-----  27
J  88.0% (44/50)    IGHJ3*02     1    -------------------------------------------------------------------------------------...T.  5

                                      ---------->                                  
                                      A  F  D  M  W  G  P  G  T  V  V  T  V  A  S  
                    Query_3116   271  CTTTTGATATGTGGGGCCCAGGGACAGTGGTCACCGTCGCCTCAG  315
J  88.0% (44/50)    IGHJ3*02     6    ..........C.......A.......A...........T.T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_222282

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           343     2e-96
IGHD6-19*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CGGATGGGCCGGGTCGGTGGCG	TAGCAGTGGCTGGTAC	GAACCGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCGGATGGGCCGGGTCGGTGGCGTAGCAGTGGCTGGTACGAACCGTACTACTTTGACTAC	AKADGPGRWRSSGWYEPYYFDY	240	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	239	114	109	2	3	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	249	236	10	3	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3117   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCTTCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  94.8% (236/249)  IGHV3-23*01  47   ............................................AG.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  A  N  S  D  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  
                    Query_3117   91   AGTGGGTCTCATCTATTAGTGCTAATAGTGATAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACATTTCCA  180
V  94.8% (236/249)  IGHV3-23*01  137  ...........G.........G..G.G...G.....................................................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N     L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  D  G  P  G  R  W  
                    Query_3117   181  AGAAC---TTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGCGGATGGGCCGGGTCGGTGGC  267
V  94.8% (236/249)  IGHV3-23*01  227  .....ACGC............................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -CDR3-IMGT--------------------------->                                  
                                      R  S  S  G  W  Y  E  P  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3117   268  GTAGCAGTGGCTGGTACGAACCGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  100.0% (16/16)   IGHD6-19*01  6    -................-------------------------------------------------------  21
J  100.0% (48/48)   IGHJ4*02     1    ------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_61211

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           288     5e-80
IGHD1-7*01                                                                                            16.1    2.2  
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAGGGGCG	GGAACTAC	CGCTA	TGATA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAGAGGGGCGGGAACTACCGCTATGATACTTTTGATATC	VRERGGNYRYDTFDI	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	19	5	0	79.2
FR2-IMGT	51	101	51	46	5	0	90.2
CDR2-IMGT	102	125	24	22	2	0	91.7
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	232	208	24	0	89.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  A  Y  T  I  H  W  V  R  Q  A  P  G  K  G  L  E  F  V  S  S  I  
                    Query_3118   16   GTGCAGCCTCTGGATTCACGTTCAGTGCCTATACAATTCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGGAATTTGTTTCAAGCATTA  105
V  89.7% (208/232)  IGHV3-64*01  65   ...................C......AG....G.T..G.....................................A.......GCT....  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  Y  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  N  G  G  S  A  S  Y  G  H  S  V  K  D  R  F  T  I  S  R  D  N  L  K  N  T  I  F  L  
                    Query_3118   106  GTAGTAATGGGGGTAGTGCATCTTATGGACACTCTGTGAAGGACAGATTCACCATCTCCAGAGACAATTTAAAGAACACGATATTTCTTC  195
V  89.7% (208/232)  IGHV3-64*01  155  ................CA...A.....C.A............G..........................CC.........C.G.A.....  244
                                      S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      Q  M  G  S  L  R  T  E  D  M  A  V  Y  Y  C  V  R  E  R  G  G  N  Y  R  Y  D  T  F  D  I  
                    Query_3118   196  AAATGGGCAGCCTGAGAACTGAAGACATGGCTGTGTATTACTGTGTGAGAGAGAGGGGCGGGAACTACCGCTATGATACTTTTGATATCT  285
V  89.7% (208/232)  IGHV3-64*01  245  .................G....G......................C......--------------------------------------  296
                                      Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                                         
D  100.0% (8/8)     IGHD1-7*01   10   ------------------------------------------------------------........----------------------  17
J  98.0% (49/50)    IGHJ3*02     1    -------------------------------------------------------------------------....G............  17

                                                                       
                                      W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3118   286  GGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  318
J  98.0% (49/50)    IGHJ3*02     18   .................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_291428

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           360     1e-101
IGHD3-9*01                                                                                            29.5    2e-04 
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTCGGGATG	GATATTTTGACTGGT	GTCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTCGGGATGGATATTTTGACTGGTGTCTTCTACTACTACTTCGATCTC	ARVGMDILTGVFYYYFDL	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	244	237	7	0	97.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  H  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3119   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCCACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.1% (237/244)  IGHV3-53*01  47   ...............................................A..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  A  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_3119   91   AGTGGGTCTCGGTCATTTATGCCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  97.1% (237/244)  IGHV3-53*01  137  ..........A..T......AG....................................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------------CDR3-IMG
                                      N  T  L  Y  F  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  M  D  I  L  T  G  
                    Query_3119   181  ACACGCTGTATTTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCCGTGTATTACTGTGCGAGGGTCGGGATGGATATTTTGACTGGTG  270
V  97.1% (237/244)  IGHV3-53*01  227  ...........C......................C.............................--------------------------  290
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  100.0% (15/15)   IGHD3-9*01   8    --------------------------------------------------------------------------...............-  22

                                      T--------------------->                                  
                                      V  F  Y  Y  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3119   271  TCTTCTACTACTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  327
J  96.2% (51/53)    IGHJ2*01     1    ----.....GG..............................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_335232

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_3120   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AGT.A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S 
                    Query_3120   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T.A....A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_3120   181  CAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ..............G.....C..................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3120   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_132900

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           413     2e-117
IGHD6-25*01                                                                                           12.2    35    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TT	AGCGGC	GAAGGTAACCTTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTAGCGGCGAAGGTAACCTTATTGACTAC	AKLSGEGNLIDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  R  Y
                    Query_3121   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCAGGTA  90
V  95.5% (277/290)  IGHV5-51*01  6    ..................................................................T....................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  Y  D  V  R  Y  R  P
                    Query_3121   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTATGATGTGAGATACAGACC  180
V  95.5% (277/290)  IGHV5-51*01  96   .......................................................................C....ACC........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3121   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGCACCGCCTTTTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (277/290)  IGHV5-51*01  186  ...................................A.................ACC..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  K  L  S  G  E  G  N  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3121   271  CATTTATTACTGTGCGAAACTTAGCGGCGAAGGTAACCTTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.5% (277/290)  IGHV5-51*01  276  ...G.............G..---------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD6-25*01  10   ----------------------......-------------------------------------------------------  15
J  100.0% (42/42)   IGHJ4*02     7    -----------------------------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_106669

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD2-2*01                                                                                            23.8    0.012 
IGHJ5*01                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATG	GGATATTGTAGCAGT	GTCATCTGTGATGGACCT	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGATATTGTAGCAGTGTCATCTGTGATGGACCTGACTCC	ARHMGYCSSVICDGPDS	291	341	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	73	1	0	98.6
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	295	280	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  T  F  G  
                    Query_3122   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTGGCA  93
V  94.9% (280/295)  IGHV5-51*01  2    .................................................................A...............G....AC..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  K  Y  
                    Query_3122   94   CCTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGAGACGAAATACA  183
V  94.9% (280/295)  IGHV5-51*01  92   G...........G..................................................................T..C.G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  R  G  Q  V  T  I  S  G  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_3122   184  GTCCGTCCTTCCGAGGCCAGGTCACCATATCAGGCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  94.9% (280/295)  IGHV5-51*01  182  .C..........A...............C....C...............C........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  R  Y  Y  C  A  R  H  M  G  Y  C  S  S  V  I  C  D  G  P  D  S  W  G  H  G  T  L  V  
                    Query_3122   274  CCGCCAGGTATTACTGTGCGAGACATATGGGATATTGTAGCAGTGTCATCTGTGATGGACCTGACTCCTGGGGCCACGGAACCCTGGTCA  363
V  94.9% (280/295)  IGHV5-51*01  272  ......T..................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  93.3% (14/15)    IGHD2-2*01   2    -----------------------------...........T...----------------------------------------------  16
J  97.5% (39/40)    IGHJ5*01     12   --------------------------------------------------------------..............A.............  39

                                                  
                                      T  V  S  S  
                    Query_3122   364  CCGTCTCCTCAG  375
J  97.5% (39/40)    IGHJ5*01     40   ............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_337807

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           403     1e-114
IGHD4-17*01                                                                                           18.0    0.67  
IGHJ6*01                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAG	CTACGGTGA	GTCCGAGTTCTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTACGGTGAGTCCGAGTTCTTTCTACTACGGTATGGACGTC	ARDLATVSPSSFYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  T  S  Y 
                    Query_3123   2    CAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCTTCTGGTTACACCTTTACCAGTTAC  91
V  94.5% (274/290)  IGHV1-18*04  7    ....................T..........................................G......................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_3123   92   GGTATCACTTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  181
V  94.5% (274/290)  IGHV1-18*04  97   .......GC........A..............A................................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  S  D  D  T  A 
                    Query_3123   182  ATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.5% (274/290)  IGHV1-18*04  187  .A.C...A..G.................C....................C..........C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  S  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_3123   272  GTGTATTACTGTGCGAGAGATTTAGCTACGGTGAGTCCGAGTTCTTTCTACTACGGTATGGACGTCTGGGGTCAAGGGACCACGGTCACC  361
V  94.5% (274/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------.........--------------------------------------------------------  12
J  98.1% (52/53)    IGHJ6*01     11   -----------------------------------------------........................G..................  53

                                                
                                       V  S  S  
                    Query_3123   362  GTCTCCTCAG  371
J  98.1% (52/53)    IGHJ6*01     54   ..........  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_335235

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           300     9e-84
IGHD3-10*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGGAGGGGGCTTCGGGACAG	TATTATAAC	GGACGACGGGGGACTC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGGAGGGGGCTTCGGGACAGTATTATAACGGACGACGGGGGACTCTGGACGTC	ARLEGASGQYYNGRRGTLDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	220	28	0	88.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  D  S  S  H  Y  W  V  W  I  R  Q  P  P  G  K  G 
                    Query_3124   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGAGACAGTAGTCACTACTGGGTCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  88.7% (220/248)  IGHV4-39*01  49   .........................................CAGT......T.........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  R  Y  F  G  T  T  F  Y  R  P  S  L  K  S  R  V  T  M  S  M  D  T  S 
                    Query_3124   91   CTGGAGTGGATTGGGACCATCCGTTACTTTGGGACCACCTTCTACAGGCCGTCACTCAAGAGTCGAGTCACCATGTCCATGGACACGTCG  180
V  88.7% (220/248)  IGHV4-39*01  139  ................GT...TA...TAG.....G.....A.....AC.....C....................A...G.A........C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  N  L  G  S  V  T  A  A  D  T  S  V  Y  Y  C  A  R  L  E  G  A  S  G  Q 
                    Query_3124   181  AAGAACCAGTTCTCCCTGAACCTGGGGTCTGTGACCGCCGCAGACACGTCTGTGTACTATTGTGCGAGGCTGGAGGGGGCTTCGGGACAG  270
V  88.7% (220/248)  IGHV4-39*01  229  ....................G...A.C.....................G.......T..C........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      DR3-IMGT------------------------>                                 
                                       Y  Y  N  G  R  R  G  T  L  D  V  W  G  Q  G  A  T  V  T  V  F  S 
                    Query_3124   271  TATTATAACGGACGACGGGGGACTCTGGACGTCTGGGGCCAAGGGGCCACGGTCACCGTCTTCTCA  336
D  100.0% (9/9)     IGHD3-10*01  23   .........---------------------------------------------------------  31
J  95.1% (39/41)    IGHJ6*02     22   -------------------------....................A...............C....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_224612

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           424     8e-121
IGHD2-21*02                                                                                           14.1    9.3   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGGGGGATG	GGTGGTAACT	CCGGCGTCT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGGGGGATGGGTGGTAACTCCGGCGTCTTAC	ARVGGWVVTPASY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	280	9	0	96.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  H  Y 
                    Query_3125   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCCACTAT  91
V  96.9% (280/289)  IGHV1-18*01  7    .................................................A..................................AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  R  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_3125   92   GGTATCAGCTGGGTGCGACGGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAG  181
V  96.9% (280/289)  IGHV1-18*01  97   ...................A......................................................................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  V  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3125   182  AACCTCCAGGGCAGAGTCACCGTGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGATGACACGGCC  271
V  96.9% (280/289)  IGHV1-18*01  187  ..G..................A..........................................................C.........  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------CDR3-IMGT-------------->                                  
                                       I  Y  Y  C  A  R  V  G  G  W  V  V  T  P  A  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3125   272  ATCTATTACTGTGCGAGAGTGGGGGGATGGGTGGTAACTCCGGCGTCTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  96.9% (280/289)  IGHV1-18*01  277  G.G................------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                    
D  90.0% (9/10)     IGHD2-21*02  11   -----------------------------......G...----------------------------------------------  20
J  100.0% (37/37)   IGHJ4*02     12   ------------------------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_226569

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           343     2e-96
IGHD1-26*01                                                                                           19.9    0.16 
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAATATTGTCA	TGGGAGCTAC	GCCG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAATATTGTCATGGGAGCTACGCCGTGATGTTTTTGATATC	ARGILSWELRRDVFDI	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  Y  T  F  S  G  F  S  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3126   1    GGTCCCTGAGACTCTCCTGTGCTGCCTCTGGATACACATTCAGTGGTTTTAGCATCAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (233/247)  IGHV3-21*01  47   ......................A..........T...C......A.C.A......G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  G  S  D  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_3126   91   AGTGGGTCTCATCCATTAGTGGTGGTAGTGATTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  94.3% (233/247)  IGHV3-21*01  137  ....................A..A.....AG........................................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  I  L  S  W  E  L  
                    Query_3126   181  AGAACTCACTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGGGGAATATTGTCATGGGAGCTAC  270
V  94.3% (233/247)  IGHV3-21*01  227  ..........G.........................................G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD1-26*01  8    --------------------------------------------------------------------------------..........  17

                                      T------------------>                                  
                                      R  R  D  V  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3126   271  GCCGTGATGTTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
J  98.0% (49/50)    IGHJ3*02     1    ----.....C............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_224613

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           389     2e-110
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GGGACT	AGGATATTGTCGTGGTACC	GACTGCAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGGACTAGGATATTGTCGTGGTACCGACTGCACCTACTACGGTTTGGACGTC	ARGLGYCRGTDCTYYGLDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	70	1	0	98.6
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	293	5	4	1	0	80
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  S  F  S  D  
                    Query_3127   5    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCAGTTTCAGCGACG  94
V  93.1% (269/289)  IGHV1-69*01  5    ...................G..........................................................CC......AG.T  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      D  A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  L  I  P  I  F  G  I  L  N  Y  A  
                    Query_3127   95   ATGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCCTCATCCCTATCTTTGGTATATTAAACTACGCAC  184
V  93.1% (269/289)  IGHV1-69*01  95   .........G.............................................GA..................C.GC...........  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  R  V  T  I  S  V  D  E  S  T  S  T  T  Y  M  E  L  S  S  L  R  S  D  D  T  
                    Query_3127   185  AGAAATTCCAGGGCAGAGTCACGATTTCCGTGGACGAGTCCACGAGCACAACCTACATGGAGCTGAGCAGCCTGAGATCTGACGACACGG  274
V  93.1% (269/289)  IGHV1-69*01  185  ....G.....................A...C......A............G...............................G.......  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-----------------------CDR3-IMGT----------------------->                   
                                      A  V  Y  F  C  A  R  G  L  G  Y  C  R  G  T  D  C  T  Y  Y  G  L  D  V  W  G  Q  G  T  T  
                    Query_3127   275  CCGTGTATTTCTGTGCAAGGGGACTAGGATATTGTCGTGGTACCGACTGCACCTACTACGGTTTGGACGTCTGGGGCCAGGGGACCACGG  364
V  93.1% (269/289)  IGHV1-69*01  275  .........A......G..-----------------------------------------------------------------------  293
                                      A  V  Y  Y  C  A                                                                          
D  89.5% (17/19)    IGHD2-2*01   1    -------------------------..........A..A.....----------------------------------------------  19
J  94.2% (49/52)    IGHJ6*02     11   ----------------------------------------------------..........A................A..........  48

                                                    
                                      V  I  V  S  S 
                    Query_3127   365  TCATCGTCTCCTCA  378
J  94.2% (49/52)    IGHJ6*02     49   ...C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_335234

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           382     3e-108
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTTCG	GCAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTCGGCAGCAGCTGACTGACTAC	ARDFRQQLTDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3128   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  G  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3128   91   AGTGGGTCTCATCCATTAGTAGTAGTGGTACTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.8% (247/250)  IGHV3-21*01  137  ..........................A...G...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  R  Q  Q  L  T  
                    Query_3128   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCTGTGTATTACTGTGCGAGAGATTTTCGGCAGCAGCTGACTG  270
V  98.8% (247/250)  IGHV3-21*01  227  ........................................G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD6-13*01  8    ----------------------------------------------------------------------------..........----  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3128   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (41/41)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_224611

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           311     4e-87
IGHD3-9*01                                                                                            44.9    5e-09
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	TCTCCGAAGAC	TATTACGATATTATGACTGATTATTATAA	GGGGGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CTCAGAGTCTCCGAAGACTATTACGATATTATGACTGATTATTATAAGGGGGCTTTTGACTTC	LRVSEDYYDIMTDYYKGAFDF	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	10	1	0	90.9
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	20	4	0	83.3
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	4	3	0	57.1
Total	N/A	N/A	231	215	16	0	93.1


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  V  P  G  K  G  L  A  W  V  S  R  I  
                    Query_3129   14   GTACAGCCTCTGGATTCACCTTTAGTACCTACTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGGCTGGCTTGGGTCTCACGTATCA  103
V  93.1% (215/231)  IGHV3-74*01  65   ..G...................C....G..........................C.................TG..............T.  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  D  G  S  K  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  
                    Query_3129   104  GTAGTGATGGGAGTAAGACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTCTATCTGC  193
V  93.1% (215/231)  IGHV3-74*01  155  A..............GC....G............................................................G.......  244
                                      N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------------------CDR3-IMGT----------
                                      Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  L  R  V  S  E  D  Y  Y  D  I  M  T  D  Y  Y  
                    Query_3129   194  AAATGAACAGTCTGAGAGACGAGGACACGGCTGTGTATTACTGTCTCAGAGTCTCCGAAGACTATTACGATATTATGACTGATTATTATA  283
V  93.1% (215/231)  IGHV3-74*01  245  ..................C.........................GCA....---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  93.1% (27/29)    IGHD3-9*01   2    --------------------------------------------------------------............T......G........  29

                                      ---------------->                                  
                                      K  G  A  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3129   284  AGGGGGCTTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTTTCCTCAG  334
D  93.1% (27/29)    IGHD3-9*01   30   .--------------------------------------------------  30
J  95.3% (41/43)    IGHJ4*02     6    --------.......A...........................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_11628

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           299     3e-83
IGHD1-26*01                                                                                           12.2    35   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTCTGGATCTCT	TGGGAG	GCGACAC	TGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCTGGATCTCTTGGGAGGCGACACTGACGAC	ATLDLLGGDTDD	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	42	9	0	82.4
CDR2-IMGT	146	169	24	16	8	0	66.7
FR3-IMGT	170	283	114	94	20	0	82.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	239	48	0	83.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  A  G  S  T  V  K  V  S  C  K  T  S  R  A  T  F  S  S  N
                    Query_3130   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGGCTGGGTCCACGGTGAAGGTCTCCTGCAAGACTTCCAGGGCCACCTTCAGCAGCAA  90
V  83.3% (239/287)  IGHV1-69*06  6    ..................................C........T....................G....TG.A.G.............T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        T  F  T  W  V  R  Q  A  S  G  Q  G  L  E  W  M  G  A  I  I  P  T  L  R  T  T  N  Y  A  Q
                    Query_3130   91   CACCTTCACTTGGGTGCGCCAGGCCTCGGGACAAGGGCTTGAGTGGATGGGGGCCATCATCCCCACCCTGCGCACGACAAACTACGCACA  180
V  83.3% (239/287)  IGHV1-69*06  96   TG.TA...GC........A......C.T.......................A.GG........T.T.T.TG.T..AG.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  R  S  S  S  T  S  Y  M  G  L  S  G  L  T  P  E  D  T  A
                    Query_3130   181  GAGGTTCCAAGGCAGAGTCACCATAACCGCGGACAGGTCTTCGAGTACAAGTTATATGGGACTGAGCGGTCTGACTCCTGAGGACACGGC  270
V  83.3% (239/287)  IGHV1-69*06  186  ..A......G...........G..T..........AA..CA....C...GCC..C....AG......A.C....GAT.............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  T  L  D  L  L  G  G  D  T  D  D  W  G  P  G  T  L  V  T  V  S  S  
                    Query_3130   271  CGTGTATTACTGTGCGACTCTGGATCTCTTGGGAGGCGACACTGACGACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  353
V  83.3% (239/287)  IGHV1-69*06  276  .................------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                    
D  100.0% (6/6)     IGHD1-26*01  8    -----------------------------......------------------------------------------------  13
J  95.1% (39/41)    IGHJ4*02     8    ------------------------------------------....T.........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_11629

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD2-2*02                                                                                            23.8    0.011
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGATC	ATTGTAGTGGTTTCAGATGCTATA	ATACAGG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGATCATTGTAGTGGTTTCAGATGCTATAATACAGGCAACTGGTTCGACCCC	AREDHCSGFRCYNTGNWFDP	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  E  W  T  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_3131   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCAGTAATTACGAGTGGACCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   .............................T.............G....T.C....G....A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_3131   91   TGGATTGGCTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGGGTCACCATTTCACTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G...A..T...........................................A........A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       L  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  D  H  C  S  G  F  R  C 
                    Query_3131   181  CTGTTCTCCCTGAAGCTAAACTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGAGGATCATTGTAGTGGTTTCAGATGC  270
V  93.5% (229/245)  IGHV4-59*01  229  .A...............G.G...........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (20/24)    IGHD2-2*02   6    ----------------------------------------------------------------------........A..AC...C...  25

                                      GT------------------------>                                  
                                       Y  N  T  G  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3131   271  TATAATACAGGCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  331
D  83.3% (20/24)    IGHD2-2*02   26   ....---------------------------------------------------------  29
J  98.0% (49/50)    IGHJ5*02     2    -----------.................................G................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_11625

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           346     2e-97
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATGG	GGTTCGAGGA	CACTCGACCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTTCGAGGACACTCGACCGTTTTTGATATC	ARDGVRGHSTVFDI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  N  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3132   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTAACTCTTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (232/243)  IGHV4-59*08  49   ........................................G....T...AC.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_3132   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTATAATCCCTCCCTTAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  95.5% (232/243)  IGHV4-59*08  139  ......................................C..C........C.....................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  V  R  G  H  S  T  V 
                    Query_3132   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGATGGGGTTCGAGGACACTCGACCGTT  270
V  95.5% (232/243)  IGHV4-59*08  229  ....................C........C.......................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD3-10*01  11   --------------------------------------------------------------------......G...------------  20
J  93.2% (41/44)    IGHJ3*02     7    -----------------------------------------------------------------------------------------.  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  T  I  I  V  S  S  
                    Query_3132   271  TTTGATATCTGGGGCCAAGGGACAACGATCATCGTCTCTTCAG  313
J  93.2% (41/44)    IGHJ3*02     8    .........................T.G...C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_11626

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           336     1e-94
IGHD2-21*01                                                                                           12.2    33   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	IGHJ4*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTTCTTTGGCGATTTCGA	CTATTC	GGGCCCCTATCCACCCCACA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTCTTTGGCGATTTCGACTATTCGGGCCCCTATCCACCCCACAAC	ARLSLAISTIRAPIHPTT	246	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  A  S  I  S  G  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_3133   4    CCCTGAGACTCTCCTGCTCTGTTTCTGGTGCCTCCATCAGTGGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  93.2% (232/249)  IGHV4-39*01  50   .....TCC...A.....A....C.......G.........CA..............................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  T  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  
                    Query_3133   94   TGGAGTGGATAGGGACTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGGGTCGAGTCACCATATCCGTAGACACGTCCA  183
V  93.2% (232/249)  IGHV4-39*01  140  ..........T....G...........................................A..............................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------CDR3-I
                                      K  D  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  S  L  A  I  S  T  
                    Query_3133   184  AGGACCAGTTCTCCCTGAAACTGAACTCTGTGACCGCCGCAGACACGGCTCTGTATTACTGTGCGAGACTTTCTTTGGCGATTTCGACTA  273
V  93.2% (232/249)  IGHV4-39*01  230  ..A................G....G.........................G..................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*01  22   ---------------------------------------------------------------------------------------...  24

                                      MGT--------------------->                                  
                                      I  R  A  P  I  H  P  T  T  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_3133   274  TTCGGGCCCCTATCCACCCCACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  332
D  100.0% (6/6)     IGHD2-21*01  25   ...--------------------------------------------------------  27
J  100.0% (36/36)   IGHJ4*02     13   -----------------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_11620

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         335     4e-94
IGHD3-22*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTGGGT	TAGGGGTTAT	AAGGGTTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTGGGTTAGGGGTTATAAGGGTTTCTTTGACTAC	ARDPWVRGYKGFFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3134     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  92.8% (232/250)  IGHV3-30-3*01  47   ..............................................C......................................G....  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  D  E  N  Y  K  Y  Y  T  D  S  L  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3134     91   AGTGGGTGGCAGTTATCTCATATGATGAAAACTATAAATATTACACGGACTCCCTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-30-3*01  137  ................A..........G..G.A.......C...G.A......G....................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        R  N  T  L  Y  L  Q  M  N  T  L  T  L  D  D  T  A  V  Y  Y  C  A  R  D  P  W  V  R  G  Y  
                    Query_3134     181  GGAACACCCTGTATCTGCAGATGAACACCCTGACACTTGACGACACGGCTGTGTATTACTGTGCGAGAGATCCTTGGGTTAGGGGTTATA  270
V  92.8% (232/250)  IGHV3-30-3*01  227  A......G...........A.......G.....G.GC...G.............................--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-22*01    16   -------------------------------------------------------------------------------...T......-  25

                                        ---------------->                                  
                                        K  G  F  F  D  Y  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_3134     271  AGGGTTTCTTTGACTACTGGGGCCAGGGAAGTCTGGTCATTGTCTCCTCAG  321
J  90.9% (40/44)    IGHJ4*02       5    -------.......................CC.......CC..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_11621

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           286     1e-79
IGHD2-21*01                                                                                           12.2    31   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCCCGCG	TATTCC	AACTCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCCCGCGTATTCCAACTCTCTTGACTCC	AREPAYSNSLDS	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	20	4	0	83.3
FR2-IMGT	49	99	51	49	2	0	96.1
CDR2-IMGT	100	123	24	17	7	0	70.8
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	233	208	25	0	89.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  K  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  I  S  Y  I 
                    Query_3135   13   TGTGCAGCCTCTGGATTCACCTTCAGTAAATATGGCATGAACTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGGAGTGGATTTCATACATT  102
V  89.3% (208/233)  IGHV3-48*03  64   ............................GT....AA..............C...........................G...........  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       G  D  S  G  A  T  I  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  N  N  S  L  Y  L 
                    Query_3135   103  GGTGATAGCGGTGCAACCATATATTACGCTGATTCTGTGAAGGGCCGGTTCACCGTCTCCAGAGACAACGCCAACAACTCACTTTATCTA  192
V  89.3% (208/233)  IGHV3-48*03  154  A..AG...T...AGT........C.....A..C..............A......A...................G........G.....G  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------CDR3-IMGT------------>         
                                       H  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  R  E  P  A  Y  S  N  S  L  D  S  W  G  Q 
                    Query_3135   193  CACATGAACAGCCTGAGAGTCGAGGACACCGCTGTTTATTTCTGTGCGAGAGAGCCCGCGTATTCCAACTCTCTTGACTCCTGGGGCCAG  282
V  89.3% (208/233)  IGHV3-48*03  244  ..A................C.........G..........A............-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (6/6)     IGHD2-21*01  23   ------------------------------------------------------------......------------------------  28
J  92.9% (39/42)    IGHJ4*02     7    -------------------------------------------------------------------------......A..........  23

                                                               
                                       G  T  P  V  T  V  S  A  
                    Query_3135   283  GGAACCCCGGTCACCGTCTCCGCAG  307
J  92.9% (39/42)    IGHJ4*02     24   .......T.............T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_11622

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD1-1*01                                                                                            14.1    9.2   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GGGAGGGGG	CAACTGG	GAACCCTTTAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTAC	ARGGGNWEPFTY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	288	267	21	0	92.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  Y
                    Query_3136   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCTA  90
V  92.7% (267/288)  IGHV5-51*01  6    .................................................................G............C......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  L  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  I  V  F  P  D  D  S  D  T  R  Y  S  P
                    Query_3136   91   CTGGCTCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGATCGTTTTTCCTGATGACTCTGATACCAGATACAGCCC  180
V  92.7% (267/288)  IGHV5-51*01  96   ....A.............C..G.........A..........G............A.C.A.....G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  I  T  I  S  A  D  K  S  I  T  T  A  F  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_3136   181  GTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCACCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACACCGC  270
V  92.7% (267/288)  IGHV5-51*01  186  .......C.......GG...........................G........A...........G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  G  N  W  E  P  F  T  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3136   271  CATCTATTACTGTGCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.7% (267/288)  IGHV5-51*01  276  ...G...........G..-----------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------.......-------------------------------------------------  11
J  100.0% (38/38)   IGHJ4*02     11   ---------------------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_11623

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           353     9e-100
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	242	234	8	0	96.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_3137   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  96.7% (234/242)  IGHV4-59*01  50   .....TCC...A..............................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  P  S  K  N  
                    Query_3137   94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACCCGTCCAAGAACC  183
V  96.7% (234/242)  IGHV4-59*01  140  ...................................................................A.........A............  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y  
                    Query_3137   184  AGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTACT  273
V  96.7% (234/242)  IGHV4-59*01  230  ............A.............................................G...----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (20/20)   IGHD5-18*01  1    ---------------------------------------------------------------....................-------  20
J  97.9% (47/48)    IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3137   274  TTGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  315
J  97.9% (47/48)    IGHJ4*02     7    ...................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_19431

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         299     2e-83
IGHD3-10*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGCTCGGC	GGTTCGGGGAGTTA	CC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTCGGCGGTTCGGGGAGTTACCACTAC	ARGLGGSGSYHY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	10	1	0	90.9
CDR1-IMGT	25	48	24	19	5	0	79.2
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	22	2	0	91.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	229	210	19	0	91.7


Alignments

                                        <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                           A  V  S  G  F  T  V  S  S  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  
                    Query_3138     14   GTGCAGTCTCTGGATTCACCGTTAGTAGCTATTGGATGAATTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCACTTATAT  103
V  91.7% (210/229)  IGHV3-30-3*01  65   ......C.............T.C.........GCT...C.C..........................................G......  154
                                           A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                        ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                        S  H  D  G  S  S  K  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  V  Y  L  
                    Query_3138     104  CACATGATGGAAGCAGTAAATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGGTATATCTAC  193
V  91.7% (210/229)  IGHV3-30-3*01  155  ..T............A........A.......................................................C.G.....G.  244
                                        S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                        -------------------------------------------><-------------CDR3-IMGT------------>          
                                        Q  M  N  S  L  R  N  E  D  T  A  V  Y  Y  C  A  R  G  L  G  G  S  G  S  Y  H  Y  W  G  Q  
                    Query_3138     194  AGATGAACAGCCTGAGAAATGAGGACACGGCTGTTTATTACTGTGCGAGGGGGCTCGGCGGTTCGGGGAGTTACCACTACTGGGGCCAGG  283
V  91.7% (210/229)  IGHV3-30-3*01  245  .A...............GC...............G..............-----------------------------------------  293
                                        Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (14/14)   IGHD3-10*01    11   -----------------------------------------------------------..............-----------------  24
J  97.3% (36/37)    IGHJ4*02       10   ---------------------------------------------------------------------------...............  24

                                                              
                                        G  T  L  V  A  V  S  S
                    Query_3138     284  GAACCCTGGTCGCCGTCTCCTC  305
J  97.3% (36/37)    IGHJ4*02       25   ...........A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_19430

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           341     5e-96
IGHD2-15*01                                                                                           10.3    121  
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	T	GCTGC	GCTGTACGAAGAGG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGCTGCGCTGTACGAAGAGGACAACTGGTTCGACCCC	AKDAALYEEDNWFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  N  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3139   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAATAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-30*18  47   ....................................C.....G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  R  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_3139   91   AGTGGGTGGCAGTTATCTCATATGATGGAAGGAAGAAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCG  180
V  93.6% (234/250)  IGHV3-30*18  137  ................A..............T..T.....C...........................................A....A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  T  V  N  L  E  M  N  S  L  R  I  E  D  T  A  V  Y  Y  C  A  K  D  A  A  L  Y  E  E  
                    Query_3139   181  AGAACACGGTGAATCTGGAAATGAATAGCCTGAGAATTGAGGACACGGCTGTTTATTACTGTGCGAAAGATGCTGCGCTGTACGAAGAGG  270
V  93.6% (234/250)  IGHV3-30*18  227  ........C..T.....C.......C.........GC...............G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD2-15*01  21   -----------------------------------------------------------------------.....--------------  25

                                      ---------------->                                
                                      D  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3139   271  ACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
J  100.0% (49/49)   IGHJ5*02     1    .................................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_337801

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ3*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTTCAGAGGCACTT	CTATGACACTGGTGGTTAT	GGGGTC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTTCAGAGGCACTTCTATGACACTGGTGGTTATGGGGTCGATGCTTTTGATGCC	AKDLQRHFYDTGGYGVDAFDA	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3140   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.8% (227/250)  IGHV3-23*01  47   ..........................................G..............G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  L  D  G  S  G  H  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3140   91   AGTGGGTCTCAGCACTTGATGGCAGTGGTCATAAGACATACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAATTCCA  180
V  90.8% (227/250)  IGHV3-23*01  137  .............TA..AG...T......GG..GC.............................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  V  Y  L  Q  L  D  S  L  G  V  E  D  T  A  L  Y  Y  C  A  K  D  L  Q  R  H  F  Y  
                    Query_3140   181  AGAACACAGTGTACCTGCAATTAGATAGCCTGGGAGTCGAGGACACGGCCTTATATTACTGTGCGAAAGATCTTCAGAGGCACTTCTATG  270
V  90.8% (227/250)  IGHV3-23*01  227  .......GC....T......A.GA.C......A...C.............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  84.2% (16/19)    IGHD3-22*01  7    -------------------------------------------------------------------------------------.....  11

                                      DR3-IMGT-------------------------->                                  
                                      D  T  G  G  Y  G  V  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3140   271  ACACTGGTGGTTATGGGGTCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTGACAGTCTCTTCAG  339
D  84.2% (16/19)    IGHD3-22*01  12   .T.G.A........-------------------------------------------------------  25
J  93.9% (46/49)    IGHJ3*01     2    --------------------.............T.....................C..C..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_19432

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         389     2e-110
IGHD1-26*01                                                                                           12.2    36    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CACGACCAAGACGATGCAAC	AGTGGG	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACGACCAAGACGATGCAACAGTGGGTGACTAC	ARHDQDDATVGDY	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	78	72	68	4	0	94.4
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	106	8	0	93
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	291	270	21	0	92.8


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  R  I  S  C  Q  G  S  G  Y  S  F  A  M 
                    Query_3141     7    GTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAGAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTCAGGGTTCTGGATACAGCTTTGCCATG  96
V  92.8% (270/291)  IGHV5-10-1*01  4    ..G....................A.......A...............................A....................A...GC  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         H  W  I  T  W  V  R  Q  M  P  G  K  G  L  G  W  M  G  R  I  D  P  R  D  S  Y  T  T  Y  S 
                    Query_3141     97   CACTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGGGTGGATGGGGCGGATTGATCCTCGTGACTCTTATACGACCTACAGC  186
V  92.8% (270/291)  IGHV5-10-1*01  94   T.........G................................A..........A...........A.............C.A.......  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  Q  G  R  V  T  I  S  V  D  K  S  I  T  T  A  H  L  Q  W  S  S  L  K  A  S  D  T 
                    Query_3141     187  CCGTCCTTCCAAGGCCGCGTCACCATCTCAGTTGACAAGTCCATCACCACTGCCCATCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACC  276
V  92.8% (270/291)  IGHV5-10-1*01  184  ................A..............C..............G.......T.C...........C.....................  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><--------------CDR3-IMGT-------------->                                  
                                         A  I  Y  Y  C  A  R  H  D  Q  D  D  A  T  V  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3141     277  GCCATCTATTACTGTGCGAGACACGACCAAGACGATGCAACAGTGGGTGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  364
V  92.8% (270/291)  IGHV5-10-1*01  274  .....G...............-------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD1-26*01    6    -----------------------------------------......-----------------------------------------  11
J  97.6% (40/41)    IGHJ4*02       8    -----------------------------------------------..................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_19435

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           361     5e-102
IGHD3-10*01                                                                                           21.8    0.045 
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAGGGGGCG	ATGCTTCGGGGAGT	AAAGAACCT	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGGGGGCGATGCTTCGGGGAGTAAAGAACCTCAACTGGTGCGACCTC	ARQGAMLRGVKNLNWCDL	271	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	10	54	45	41	4	0	91.1
CDR1-IMGT	55	84	30	27	3	0	90
FR2-IMGT	85	135	51	49	2	0	96.1
CDR2-IMGT	136	156	21	20	1	0	95.2
FR3-IMGT	157	270	114	106	8	0	93
CDR3-IMGT (germline)	271	276	6	6	0	0	100
Total	N/A	N/A	267	249	18	0	93.3


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  Q  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R 
                    Query_3142   10   CTGGTGCAGCCCTCGGAGACCCTGTCCCTCACCTGTACTGTTTCTGGTGGCTCCGTCAGCAGTGGATCTTACTACTGGAGCTGGATCCGG  99
V  93.3% (249/267)  IGHV4-61*01  31   ......A....T.......................C.....C.......................TAG......................  120
                                       L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R 

                                      ------FR2-IMGT---------------------><-----CDR2-IMGT-----><--------------------------------
                                       Q  P  P  G  K  R  L  E  W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  T 
                    Query_3142   100  CAGCCCCCAGGGAAGCGACTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCACC  189
V  93.3% (249/267)  IGHV4-61*01  121  ...............G...................T................G.....A...............................  210
                                       Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T 

                                      --------------------FR3-IMGT----------------------------------------------------><--------
                                       V  S  I  D  T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  Q 
                    Query_3142   190  GTGTCAATCGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCCTGTATTATTGTGCGAGACAG  279
V  93.3% (249/267)  IGHV4-61*01  211  A.A...G.A..................................G.........................G.......C.........---  297
                                       I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R    

                                      --------------CDR3-IMGT--------------------->                                  
                                       G  A  M  L  R  G  V  K  N  L  N  W  C  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3142   280  GGGGCGATGCTTCGGGGAGTAAAGAACCTCAACTGGTGCGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  358
D  92.9% (13/14)    IGHD3-10*01  9    ------...G..........-----------------------------------------------------------  22
J  94.0% (47/50)    IGHJ5*02     2    -----------------------------........T.....C..............................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_224614

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           315     5e-88
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TCCGTGCA	TATTACTTTGATAGGAGT	CCCCGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCCGTGCATATTACTTTGATAGGAGTCCCCGGGACTAC	VRAYYFDRSPRDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  S  S  D  F  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3143   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTCCAGTGACTTTAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  91.4% (222/243)  IGHV3-21*01  47   ....................G..................T....AG..A....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  S  S  G  T  Y  I  Y  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  A  
                    Query_3143   91   AGTGGGTCTCATCCATAACTAGTAGTGGTACTTACATATACTACGCAGACTCAGTGACGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  91.4% (222/243)  IGHV3-21*01  137  ................T.G.......A...G..........................A......A.........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      R  N  S  M  S  L  Q  M  N  S  L  T  V  D  D  T  A  I  Y  Y  C  V  R  A  Y  Y  F  D  R  S  
                    Query_3143   181  GGAACTCTATGTCTCTGCAAATGAACAGCCTGACAGTCGACGACACGGCTATCTATTACTGTGTCCGTGCATATTACTTTGATAGGAGTC  270
V  91.4% (222/243)  IGHV3-21*01  227  A......AC...A....................G..C...G.........G.G..........---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  88.9% (16/18)    IGHD3-22*01  2    -----------------------------------------------------------------------.......A......T...-  19

                                      ---------->                                  
                                      P  R  D  Y  W  G  Q  V  T  L  V  T  V  S  S  
                    Query_3143   271  CCCGGGACTACTGGGGCCAGGTAACCCTGGTCACCGTCTCCTCAG  315
J  97.5% (39/40)    IGHJ4*02     9    -----................G.......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_19437

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            14.1    8.0  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	232	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3144   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.9% (232/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3144   91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCTAAGAAC  180
V  95.9% (232/242)  IGHV4-59*01  139  ................AT........G.G......................................................C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  D  P 
                    Query_3144   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCGACCCC  270
V  95.9% (232/242)  IGHV4-59*01  229  .............................C..T.............................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------.......--------------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------.................  17

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3144   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (51/51)   IGHJ5*02     18   ..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_19439

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         366     2e-103
IGHD3-16*02                                                                                           25.7    0.003 
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGCAGCC	TGGGGGAATTATCGTT	C	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGCAGCCTGGGGGAATTATCGTTCCTTTGACTAC	ARAAWGNYRSFDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  D  G  S  I  S  G  G  G  F  Y  W  S  W  L  R  Q  P  P  G  K  G 
                    Query_3145     1    ACCCTGTCCCTCACCTGCACTGTCTCTGATGGCTCCATCAGCGGTGGTGGTTTCTACTGGAGTTGGCTCCGCCAGCCCCCAGGGAAGGGC  90
V  97.2% (241/248)  IGHV4-30-4*01  49   ............................G.............A......A..A.............A.......................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3145     91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  97.2% (241/248)  IGHV4-30-4*01  139  ..........................................................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  A  A  W  G  N  Y  R 
                    Query_3145     181  AAGAACCACTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTTCTGTGCCAGGGCAGCCTGGGGGAATTATCGT  270
V  97.2% (241/248)  IGHV4-30-4*01  229  ........G.................................................A.........----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  93.8% (15/16)    IGHD3-16*02    17   ---------------------------------------------------------------------------.......G.......  31

                                        ----------->                                  
                                         S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3145     271  TCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  93.8% (15/16)    IGHD3-16*02    32   .---------------------------------------------  32
J  100.0% (44/44)   IGHJ4*02       5    --............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_19438

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         324     8e-91
IGHD3-9*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTGCAGATCACC	ATATTTTGACTGGTTA	CTTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCTGCAGATCACCATATTTTGACTGGTTACTTTACTAC	ASCRSPYFDWLLYY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  S  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3146     1    GGTCCCTGAGGCTCTCCTGTGCAGCCTCTGGATTCTCCTTCAGCAGCTCTGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGG  90
V  91.9% (227/247)  IGHV3-30-3*01  47   ..........A........................A.......T....A....................................G....  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  I  I  S  H  D  G  N  E  K  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_3146     91   AGTGGGTGGCAATCATTTCACATGATGGAAACGAAAAGTACTACGCAGATTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  91.9% (227/247)  IGHV3-30-3*01  137  ...........G.T..A...T.........G.A.T..A...........C.......A................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                        N  N  T  L  Y  V  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  S  C  R  S  P  Y  F  D  
                    Query_3146     181  ACAATACGCTGTATGTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTACTTCTGTGCGAGCTGCAGATCACCATATTTTGACT  270
V  91.9% (227/247)  IGHV3-30-3*01  227  .G..C.........C........................................T.A.........-----------------------  293
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (16/16)   IGHD3-9*01     9    -------------------------------------------------------------------------------...........  19

                                        ------------->                                  
                                        W  L  L  Y  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_3146     271  GGTTACTTTACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
D  100.0% (16/16)   IGHD3-9*01     20   .....-------------------------------------------  24
J  97.4% (38/39)    IGHJ4*02       10   ---------..................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_224615

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           344     6e-97
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	C	TATAGCAGTGGCTGG	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGACTATAGCAGTGGCTGGTACTTTGACTAC	ARDYSSGWYFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3147   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTACTTTCAGTAGCTACTGGATACACTGGGTCCGCCAAGCTCCAGGAAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-74*01  47   ..................................C..C.................G.......................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  I  T  R  D  E  I  G  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3147   91   AGTGGGTCTCACGTATTACTAGAGATGAGATTGGCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-74*01  137  T.................A...T....G..G.A......G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  S  S  G  W  Y  
                    Query_3147   181  AGAATACGGTGTATCTGCAAATGAACAGTCTCAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGGGACTATAGCAGTGGCTGGTACT  270
V  94.0% (235/250)  IGHV3-74*01  227  ....C...C......................G...................................A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD6-19*01  4    -----------------------------------------------------------------------...............----  18
J  97.8% (45/46)    IGHJ4*02     3    --------------------------------------------------------------------------------------....  6

                                      ------->                                  
                                      F  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3147   271  TTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.8% (45/46)    IGHJ4*02     7    ...............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_122347

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           411     5e-117
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	276	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_3148   1    GCAGCTGGTGCAGTCTGGGGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.5% (276/289)  IGHV5-51*03  6    ..................A..........................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_3148   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.5% (276/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_3148   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.5% (276/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3148   271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.5% (276/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_3148   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_135478

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            343     2e-96
IGHD6-19*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCAAGTCGAG	GTGGCTGGTAC	N/A	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCAAGTCGAGGTGGCTGGTACGACTAC	ARAPSRGGWYDY	255	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	140	36	22	2	12	61.1
FR3-IMGT	141	254	114	113	1	0	99.1
CDR3-IMGT (germline)	255	261	7	7	0	0	100
Total	N/A	N/A	261	242	7	12	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  S  W  M  S  W  V  R  Q  G  P  G  K  G  L  
                    Query_3149   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTTAGTAGCTCTTGGATGAGCTGGGTCCGCCAGGGTCCAGGGAAGGGGCTGG  90
V  92.7% (242/261)  IGHV3-7*01   47   ....................G...........................A.......................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------------CDR2-IMGT------------><---------------------------------------
                                      E  W  V  V  N  V  K  Q  D  G  G  E  N  G  G  A  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  
                    Query_3149   91   AGTGGGTGGTCAACGTAAAGCAAGATGGAGGTGAAAATGGAGGTGCGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCA  180
V  92.7% (242/261)  IGHV3-7*01   137  .........C....A..............A....------------............................................  214
                                      E  W  V  A  N  I  K  Q  D  G  S  E              K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  

                                      -------------FR3-IMGT----------------------------------------------------><-------------CD
                                      R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  P  S  
                    Query_3149   181  GAGACAACGCCAAGAACTCACTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGCCCCAAGTC  270
V  92.7% (242/261)  IGHV3-7*01   215  ..........................C......................................................---------  295
                                      R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R           

                                      R3-IMGT------------>                                  
                                      R  G  G  W  Y  D  Y  W  G  L  G  T  L  V  I  V  S  S  
                    Query_3149   271  GAGGTGGCTGGTACGACTACTGGGGCCTGGGAACCCTGGTCATCGTCTCCTCAG  324
D  100.0% (11/11)   IGHD6-19*01  11   ---...........----------------------------------------  21
J  95.0% (38/40)    IGHJ4*02     9    --------------.............A..............C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_122343

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           322     2e-90
IGHD2-21*02                                                                                           29.5    2e-04
IGHJ1*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-21*02	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GCGAAGCGA	TGTGGTGGTGACTGC	CGAG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGAGCGAAGCGATGTGGTGGTGACTGCCGAGTACTTCCAACAC	VKERSDVVVTAEYFQH	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  F  S  S  S  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3150   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCTTCAGTAGTTCTGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  91.2% (228/250)  IGHV3-30*18  47   ...................................A..........C.A...C................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  S  D  G  S  N  K  W  F  S  E  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3150   91   AGTGGGTGGCAGTCATCTCTTCTGATGGAAGTAATAAGTGGTTTTCGGAATCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCGA  180
V  91.2% (228/250)  IGHV3-30*18  137  .............T..A..A.A...............A.AC.A.G.A..C......................................C.  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  S  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K  E  R  S  D  V  V  V  
                    Query_3150   181  AGAACACTCTGTCTCTGCAAATGAGCAGCCTGAGAGCTGAGGACACGGCTGTTTATTACTGTGTGAAAGAGCGAAGCGATGTGGTGGTGA  270
V  91.2% (228/250)  IGHV3-30*18  227  .......G....A...........A...........................G..........C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD2-21*02  8    -------------------------------------------------------------------------------...........  18

                                      T------------------>                                  
                                      T  A  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3150   271  CTGCCGAGTACTTCCAACACTGGGGCCAGGGCACCCTGGTGACCGTCTCCTCAG  324
D  100.0% (15/15)   IGHD2-21*02  19   ....--------------------------------------------------  22
J  95.7% (44/46)    IGHJ1*01     7    --------........G.......................C.............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_122340

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            321     6e-90
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	25	2	0	92.6
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  
                    Query_3151   1    GGTCCCTGAGACTCTCCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGC  90
V  91.8% (225/245)  IGHV4-4*02   47   ..A.....TCC...A......C........................T..T........................C...............  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  G  S  
                    Query_3151   91   TGGAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACGGGTCCG  180
V  91.8% (225/245)  IGHV4-4*02   137  .....................A..A..............A................A................A.........AA....A  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      E  N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  
                    Query_3151   181  AGAACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTT  270
V  91.8% (225/245)  IGHV4-4*02   227  ..................AG....G........................................-------------------------  291
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD4-17*01  5    --------------------------------------------------------------------------.......---------  11
J  97.8% (45/46)    IGHJ6*02     17   -------------------------------------------------------------------------------------....A  21

                                      ------->                                 
                                      L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3151   271  TGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  311
J  97.8% (45/46)    IGHJ6*02     22   .........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_135473

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           363     1e-102
IGHD2-8*01                                                                                            19.9    0.16  
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD2-8*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCC	GGATATTGTTCTA	CCAAGCGGCTCGT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGATCCGGATATTGTTCTACCAAGCGGCTCGTACAACTGGTTCGACCCC	TTDPDIVLPSGSYNWFDP	249	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	244	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3152   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTGTCAGCAATGCCTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.3% (244/256)  IGHV3-15*01  47   .......T..............................T....T..C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  I  V  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_3152   91   AGTGGGTTGGCCGTATTAAAAGCAAAATTGTTGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCCAGAGATG  180
V  95.3% (244/256)  IGHV3-15*01  137  ...........................C..A...................................................A.......  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  N  T  V  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  T  T  D  P  D  I  V  
                    Query_3152   181  ATTCAAAAAACACGGTGTATCTGCAGATGAATAGCCTGAAAAGCGAGGACACAGCCGTGTATTACTGTACCACAGATCCGGATATTGTTC  270
V  95.3% (244/256)  IGHV3-15*01  227  ..............C..........A.....C..........C.................................--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  92.3% (12/13)    IGHD2-8*01   2    -------------------------------------------------------------------------------.........A.  12

                                      -CDR3-IMGT--------------------->                                  
                                      L  P  S  G  S  Y  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3152   271  TACCAAGCGGCTCGTACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  92.3% (12/13)    IGHD2-8*01   13   ..----------------------------------------------------------------  14
J  100.0% (51/51)   IGHJ5*02     1    ---------------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_135472

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         392     2e-111
IGHD6-19*01                                                                                           21.8    0.046 
IGHJ3*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CACCCCCTC	ATAACAGTGGCTGG	AAGGTTTC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACCCCCTCATAACAGTGGCTGGAAGGTTTCATGCTTTTGAAATC	ARHPLITVAGRFHAFEI	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  V  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  P  S  Y
                    Query_3153     1    GCAGCTGGTGCAGTCTGGAGCAGTTGTGAAGAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGCTCTGGATACAGTTTTCCCTCTTA  90
V  93.4% (270/289)  IGHV5-10-1*01  6    .......................AG.....A...................................T...........C...A..AGC..  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  S  Y  S  P
                    Query_3153     91   CTGGATCACCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAGCTACAGCCC  180
V  93.4% (270/289)  IGHV5-10-1*01  96   ........G..............T........................................................A.........  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  L  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_3153     181  GTCCCTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCACTAGCACTGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  93.4% (270/289)  IGHV5-10-1*01  186  ....T....................................TC..............................A................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------------CDR3-IMGT-------------------->                          
                                          V  Y  F  C  A  R  H  P  L  I  T  V  A  G  R  F  H  A  F  E  I  W  G  Q  G  T  M  V  T  V
                    Query_3153     271  CGTCTATTTCTGTGCGAGACACCCCCTCATAACAGTGGCTGGAAGGTTTCATGCTTTTGAAATCTGGGGCCAAGGGACAATGGTCACCGT  360
V  93.4% (270/289)  IGHV5-10-1*01  276  .A.G....A..........-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD6-19*01    5    ----------------------------...G..........------------------------------------------------  18
J  97.9% (47/48)    IGHJ3*02       3    --------------------------------------------------..........T.............................  42

                                                
                                          S  S  
                    Query_3153     361  CTCTTCAG  368
J  97.9% (47/48)    IGHJ3*02       43   ........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_135475

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD6-6*01                                                                                            16.1    2.3   
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	T	GAGTTTAGCACCTC	CGCGGAGTATGCGCGCCG	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTGAGTTTAGCACCTCCGCGGAGTATGCGCGCCGATTACTACAATAACTACGCTATGGACGTC	ARVSLAPPRSMRADYYNNYAMDV	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	236	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_3154   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (236/244)  IGHV4-59*01  49   ............................................................A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_3154   91   TGGATTGGGTATATTAATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAGC  180
V  96.7% (236/244)  IGHV4-59*01  139  ..............CT........................................................................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  V  S  L  A  P  P  R  S  M 
                    Query_3154   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTTCTGTGCGCGAGTGAGTTTAGCACCTCCGCGGAGTATG  270
V  96.7% (236/244)  IGHV4-59*01  229  ...............C...............................G....A.......A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  85.7% (12/14)    IGHD6-6*01   1    -----------------------------------------------------------------....A.....G...-----------  14

                                      3-IMGT----------------------------->                                 
                                       R  A  D  Y  Y  N  N  Y  A  M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_3154   271  CGCGCCGATTACTACAATAACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  339
J  91.9% (57/62)    IGHJ6*02     1    -------........T.CT......G................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_135474

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           389     2e-110
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ1*01                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGAGTGGCCAC	AGCAGCAGCTGGT	GGACAT	CTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGAGTGGCCACAGCAGCAGCTGGTGGACATCTGAGTACTTCCAGGAG	ARMSGHSSSWWTSEYFQE	292	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	70	4	0	94.6
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	104	10	0	91.2
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	271	22	0	92.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  P  
                    Query_3155   5    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGCTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTCCCCA  94
V  92.5% (271/293)  IGHV5-51*03  2    ....G.....G..................G....A..................................................TA...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  H  W  I  G  W  V  R  Q  T  P  G  K  G  L  E  W  M  G  L  I  Y  P  D  D  S  D  T  R  Y  
                    Query_3155   95   GCCATTGGATCGGCTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGACTCATCTATCCTGATGACTCTGATACCAGATACA  184
V  92.5% (271/293)  IGHV5-51*03  92   ..T.C......................T...........................GA............G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  K  G  Q  V  T  I  S  V  D  K  S  I  N  T  A  F  L  R  W  A  S  L  K  A  S  D  
                    Query_3155   185  GCCCGTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAACACCGCCTTCCTGCGCTGGGCCAGCCTGAAGGCCTCGGACA  274
V  92.5% (271/293)  IGHV5-51*03  182  ...........C.....................C..............G........A.....AG...AG....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------------CDR3-IMGT--------------------->                   
                                      S  G  M  Y  Y  C  A  R  M  S  G  H  S  S  S  W  W  T  S  E  Y  F  Q  E  W  G  Q  G  T  L  
                    Query_3155   275  GCGGCATGTATTACTGTGCGAGAATGAGTGGCCACAGCAGCAGCTGGTGGACATCTGAGTACTTCCAGGAGTGGGGCCAGGGCACCCTGG  364
V  92.5% (271/293)  IGHV5-51*03  272  C..C...................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (13/13)   IGHD6-13*01  7    -----------------------------------.............------------------------------------------  19
J  92.2% (47/51)    IGHJ1*01     2    ------------------------------------------------------....A.........C.C...................  37

                                                     
                                      V  S  V  S  S  
                    Query_3155   365  TCTCCGTCTCCTCAG  379
J  92.2% (47/51)    IGHJ1*01     38   ..A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_122348

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD1-1*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAGGGGG	CAACTGG	GACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTAC	ARGGGNWDPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	269	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  Y
                    Query_3156   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCTA  90
V  93.4% (269/288)  IGHV5-51*01  6    .................................................................G............C......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  V  V  Y  P  D  D  S  D  A  R  Y  S  P
                    Query_3156   91   CTGGATCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGGTCGTCTATCCTGATGACTCTGATGCCAGATACAGCCC  180
V  93.4% (269/288)  IGHV5-51*01  96   ..................C..G.........A..........G.........A..A.........G..........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  I  T  I  S  A  D  K  S  I  S  T  A  F  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_3156   181  GTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAACAGCCTGAAAGCCTCGGACACCGC  270
V  93.4% (269/288)  IGHV5-51*01  186  .......C.......GG....................................A...........G.........G..............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  G  N  W  D  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3156   271  CATCTATTACTGTGCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.4% (269/288)  IGHV5-51*01  276  ...G..............-----------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------.......-------------------------------------------------  11
J  100.0% (44/44)   IGHJ4*02     5    ---------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_337802

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         336     1e-94
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGAGGGAGCC	TATAGCAGTGTCTG	CATCCCTTATAACTCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGAGGGAGCCTATAGCAGTGTCTGCATCCCTTATAACTCCGCTTGACTAC	ARVREPIAVSASLITPLDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  S  F  S  H  Y  A  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_3157     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCCTTCAGTCACTATGCTATGCATTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-30-3*01  47   ...................................A........AG............C............G..................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  D  D  G  T  N  K  H  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3157     91   AGTGGGTGGCAGTTATATCAGATGATGGCACCAATAAACATTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-30-3*01  137  ....................T.......A.G.......T.C.A...............................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                        K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  A  Y  Y  C  A  R  V  R  E  P  I  A  V  
                    Query_3157     181  AGAACACGTTGTTTCTGCAAATGAATAGCCTGAGAGCTGAGGACACGGCTGCATATTACTGTGCGAGGGTGAGGGAGCCTATAGCAGTGT  270
V  93.5% (231/247)  IGHV3-30-3*01  227  ........C...A............C.........................TG..............-----------------------  293
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD6-19*01    4    -------------------------------------------------------------------------------..........G  14

                                        -IMGT----------------------->                                  
                                        S  A  S  L  I  T  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3157     271  CTGCATCCCTTATAACTCCGCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  92.9% (13/14)    IGHD6-19*01    15   ...------------------------------------------------------------  17
J  100.0% (42/42)   IGHJ4*02       7    ---------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_77084

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           344     6e-97
IGHD4-4*01                                                                                            19.9    0.16 
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD4-4*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGCCTT	TGACTACTATAACTAC	TACTAT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGCCTTTGACTACTATAACTACTACTATTTCGACCCC	ARDAFDYYNYYYFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  L  T  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3158   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACCTCACTAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-30*04  47   ....................................C.T...G...C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  S  Y  D  G  T  D  K  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  K  S  
                    Query_3158   91   AGTGGGTGGCAATTATTTCATATGATGGAACTGATAAGTACTACGCAGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAGACAAATCCA  180
V  94.0% (235/250)  IGHV3-30*04  137  ...........G....A.............G.A....A...............................C...............T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  A  F  D  Y  Y  N  
                    Query_3158   181  AGAACACGCTGTATCTACAGATGAACAGCCTGAGAGTTGAGGACACGGCTGTATATTACTGTGCGAGAGACGCCTTTGACTACTATAACT  270
V  94.0% (235/250)  IGHV3-30*04  227  ................G..A................C...............G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD4-4*01   1    ----------------------------------------------------------------------------.......AG.....  14

                                      ---------------->                                  
                                      Y  Y  Y  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3158   271  ACTACTATTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  321
D  87.5% (14/16)    IGHD4-4*01   15   ..-------------------------------------------------  16
J  97.7% (42/43)    IGHJ5*02     9    --------......................................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_125692

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           280     1e-77
IGHD6-25*01                                                                                           18.0    0.59 
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTG	GCAGCGGCT	GCCACGAACTTCTATCACGACGAAC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCTGGCAGCGGCTGCCACGAACTTCTATCACGACGAACTGGACGTC	VRDLAAAATNFYHDELDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	13	8	0	61.9
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	212	33	0	86.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  P  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3159   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCCCTGGCTTCTACTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  86.5% (212/245)  IGHV4-59*01  49   .............................T.........AG.A.T.A...........................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  F  Y  Y  N  G  E  S  N  Y  N  P  S  L  K  S  R  V  S  I  S  L  D  M  S  K  S 
                    Query_3159   91   TGGATTGGCCACTTCTACTACAATGGCGAGTCCAACTACAATCCCTCCCTCAAGAGTCGAGTCTCCATTTCTCTGGACATGTCCAAGAGT  180
V  86.5% (212/245)  IGHV4-59*01  139  ........GT.TA....T....G...GAGCA..........C.....................A....A..AG.A....C........AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  F  T  S  V  T  A  A  D  T  A  V  Y  F  C  V  R  D  L  A  A  A  A  T  N  F 
                    Query_3159   181  CAGTTCTCCCTGAAGTTCACTTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGTGAGAGATCTGGCAGCGGCTGCCACGAACTTC  270
V  86.5% (212/245)  IGHV4-59*01  229  ...............C.G.GC...............................A.....C......-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-25*01  8    ---------------------------------------------------------------------.........------------  16

                                      -------------------->                                 
                                       Y  H  D  E  L  D  V  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_3159   271  TATCACGACGAACTGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTCA  324
J  97.6% (40/41)    IGHJ6*02     22   -------------........................C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_132129

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           350     8e-99
IGHD1-26*01                                                                                           10.3    120  
IGHJ2*01                                                                                              102     4e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD1-26*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGGGTGC	CTACT	TCAA	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGGGTGCCTACTTCAACTACTGGTACTTCGATCTC	ARWGAYFNYWYFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  A  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3160   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGCATTCACCCTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGG  90
V  95.2% (236/248)  IGHV3-30*03  47   ..............................G.......T..............................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  N  N  R  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3160   91   AGTGGGTGGCGGTTATATCATATGATGGAAATAATAGATACTATGCCGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (236/248)  IGHV3-30*03  137  ..........A...................G.....A.........A...........................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  L  Q  M  N  S  L  R  V  E  D  T  A  I  Y  Y  C  A  R  W  G  A  Y  F  N  Y  
                    Query_3160   181  AGAACACGCTGTCTCTGCAAATGAACAGCCTGAGAGTTGAGGACACGGCCATCTATTACTGTGCGAGATGGGGTGCCTACTTCAACTACT  270
V  95.2% (236/248)  IGHV3-30*03  227  ............A.......................C............TG.G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  14   ----------------------------------------------------------------------------.....---------  18
J  100.0% (53/53)   IGHJ2*01     1    -------------------------------------------------------------------------------------.....  5

                                      ------------->                                  
                                      W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3160   271  GGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  318
J  100.0% (53/53)   IGHJ2*01     6    ................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_125694

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           383     1e-108
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*01                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGC	TAGTAGTGTTTATTAC	AGAGATGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGCTAGTAGTGTTTATTACAGAGATGGCTTTGACTAC	ARGASSVYYRDGFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	287	266	21	0	92.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  T  S  V  K  V  S  C  K  A  S  G  Y  T  F  D  A  Y 
                    Query_3161   2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGACCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTGATGCCTAT  91
V  92.7% (266/287)  IGHV1-18*01  7    ...................C...................G.........................................ACCAG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  R  Q  G  L  E  W  V  G  W  I  N  T  Y  T  G  D  T  N  Y  A  Q 
                    Query_3161   92   GGTATCAACTGGGTGCGACAGGCCCCTCGACAAGGACTTGAGTGGGTGGGTTGGATCAACACTTACACTGGTGACACAAACTATGCACAG  181
V  92.7% (266/287)  IGHV1-18*01  97   .......G...................G.......G.........A....A.......G.G......A....A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  R  L  R  Y  D  D  T  A 
                    Query_3161   182  AATCTCCAGGGCAGAGTCACCATGACCACTGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGACTGAGATATGACGACACGGCC  271
V  92.7% (266/287)  IGHV1-18*01  187  ..G..........................A......................................C.......C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  G  A  S  S  V  Y  Y  R  D  G  F  D  Y  W  G  P  G  T  L  V  T  V  S  S 
                    Query_3161   272  GTGTATTACTGTGCCAGGGGGGCTAGTAGTGTTTATTACAGAGATGGCTTTGACTACTGGGGCCCCGGAACCCTGGTCACCGTCTCCTCA  361
V  92.7% (266/287)  IGHV1-18*01  277  ..............G..-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  93.8% (15/16)    IGHD3-22*01  13   -----------------------........G.......---------------------------------------------------  28
J  95.5% (42/44)    IGHJ4*01     5    -----------------------------------------------.................AA........................  47

                                       
                                       
                    Query_3161   362  G  362
J  95.5% (42/44)    IGHJ4*01     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_125695

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           410     1e-116
IGHD1-20*01                                                                                           23.8    0.012 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-20*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGAAAA	TATAACGGGAACGAC	GGAAT	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGAAAATATAACGGGAACGACGGAATTGCCTTTGATATC	ARVGKYNGNDGIAFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N  S  F
                    Query_3162   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAACAGCTT  90
V  95.2% (276/290)  IGHV1-69*01  6    ..................G.......................C........................................G.....A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  N  W  V  R  Q  A  P  G  H  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  K  Y  A  Q
                    Query_3162   91   TGCTGTCAACTGGGTGCGACAGGCCCCTGGACATGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAACAAAATACGCACA  180
V  95.2% (276/290)  IGHV1-69*01  96   ....A...G........................A..........................................G....C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_3162   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGGACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.2% (276/290)  IGHV1-69*01  186  .............................................C....C.......................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        A  Y  Y  C  A  R  V  G  K  Y  N  G  N  D  G  I  A  F  D  I  W  G  Q  G  T  I  V  T  V  S
                    Query_3162   271  CGCTTATTATTGTGCGAGAGTAGGAAAATATAACGGGAACGACGGAATTGCCTTTGATATCTGGGGCCAAGGGACAATAGTCACCGTCTC  360
V  95.2% (276/290)  IGHV1-69*01  276  ..TG.....C..........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  93.3% (14/15)    IGHD1-20*01  3    ----------------------------......T........-----------------------------------------------  17
J  95.7% (45/47)    IGHJ3*02     4    ------------------------------------------------...T..........................G...........  45

                                           
                                        S  
                    Query_3162   361  TTCAG  365
J  95.7% (45/47)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_125697

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           297     7e-83
IGHD3-10*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              39.1    5e-07


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACGTC	TTACTATGTTTCGGGG	CCACCGACCGAC	CCAGG	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	217	27	0	88.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  K  D  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3163   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAAGGACTACGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  88.9% (217/244)  IGHV3-23*01  47   ..........................................GCAG...T.......G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  N  D  T  G  L  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3163   91   AATGGGTCTCAAGTATTAATGATACTGGTCTTACTACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  88.9% (217/244)  IGHV3-23*01  137  .G.........GC.....G..G..G....GG..GC.............................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT---------------------------------------------------->                            
                                      K  N  I  V  Y  L  Q  M  N  S  L  R  G  A  D  T  A  I  Y  Y  C  A  R  L  T  M  F  R  G  H  
                    Query_3163   181  AAAACATTGTGTATCTGCAAATGAACAGCCTGAGAGGCGCGGACACGGCCATTTATTATTGTGCACGTCTTACTATGTTTCGGGGCCACC  270
V  88.9% (217/244)  IGHV3-23*01  227  .G....CGC...........................C..A..........G.A.....C.....--------------------------  290
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.8% (15/16)    IGHD3-10*01  4    ---------------------------------------------------------------------........G.......-----  19

                                                                          
                                      R  P  T  Q  G  A  L  V  T  V  S  S  
                    Query_3163   271  GACCGACCCAGGGAGCCCTAGTCACCGTCTCTTCAG  306
J  89.7% (26/29)    IGHJ4*02     20   -------.......A....G...........C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_125698

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           277     1e-76
IGHD2-15*01                                                                                           21.8    0.045
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATAGGC	AGTGGTGGTGGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATAGGCAGTGGTGGTGGCTGCTACTTTGACACC	ARRLGSGVPCTPFRIGSGGGCYFDT	244	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	213	36	0	85.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  P  G  D  S  I  S  S  D  S  F  Y  W  A  W  I  R  Q  S  P  V  K  G 
                    Query_3164   1    ACCCTGTCCCTCACCTGCACTGTTCCCGGTGATTCCATCAGCAGTGACAGTTTCTACTGGGCCTGGATCCGCCAGTCCCCAGTGAAGGGA  90
V  85.5% (213/249)  IGHV4-39*02  49   .......................CT.T....GC............AGT....A........G.............C......G......G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  M  F  N  G  G  R  T  Y  S  N  P  S  L  K  N  R  V  T  I  S  A  D  T  S 
                    Query_3164   91   CTGGAGTGGATAGGGACTATGTTTAATGGTGGACGCACCTATTCCAACCCGTCCCTCAAGAATCGAGTCACCATATCTGCGGACACGTCC  180
V  85.5% (213/249)  IGHV4-39*02  139  ...........T....G...C.A.T..A....GA.......C.A.................G...............C.TA.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       R  N  H  F  S  L  R  L  T  Y  V  T  S  A  D  S  G  V  Y  Y  C  A  R  R  L  G  S  G  V  P 
                    Query_3164   181  AGGAACCACTTCTCCCTGAGGCTGACCTATGTGACCTCCGCAGACAGCGGTGTCTATTACTGTGCGAGACGTCTTGGGTCCGGTGTCCCC  270
V  85.5% (213/249)  IGHV4-39*02  229  .A.................A.....G..C.......G.........CG.C...G...............---------------------  297
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      ------CDR3-IMGT-------------------------------->                                 
                                       C  T  P  F  R  I  G  S  G  G  G  C  Y  F  D  T  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_3164   271  TGTACTCCCTTCCGCATAGGCAGTGGTGGTGGCTGCTACTTTGACACCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  351
D  92.9% (13/14)    IGHD2-15*01  11   ---------------------.........A....----------------------------------------------  24
J  95.7% (44/46)    IGHJ4*02     2    -----------------------------------..........TA..................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_132123

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           361     4e-102
IGHD3-22*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GTTAGCGGG	GATAGTAG	CATCTAGTGCAGTTAGAGCGGACTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTTAGCGGGGATAGTAGCATCTAGTGCAGTTAGAGCGGACTTT	AKLAGIVASSAVRADF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	239	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3165   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (239/247)  IGHV3-23*01  47   ...........................................C.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  V  S  G  S  G  G  A  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3165   91   AGTGGGTCTCAGCTGTCAGTGGTAGTGGTGGTGCCACATTCTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.8% (239/247)  IGHV3-23*01  137  ..............A.T...............AG.....A..................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  L  A  G  I  V  A  S  
                    Query_3165   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAAGTTAGCGGGGATAGTAGCATCTA  270
V  96.8% (239/247)  IGHV3-23*01  227  .........................................................A.........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD3-22*01  11   ----------------------------------------------------------------------------........------  18

                                      T------------------>                                  
                                      S  A  V  R  A  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3165   271  GTGCAGTTAGAGCGGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (34/34)   IGHJ4*02     15   --------------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_132120

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AGCCTTTCACA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGAAGCCTTTCACATTGACTAC	GREAFHIDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  R  S  S  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3166   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGGAGTTCTAGCATGACCTGGGTCCGCCAGGCTCCGGGGAAGGGACTGG  90
V  92.0% (230/250)  IGHV3-21*01  47   ....................................C......T..C.A........A..................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  N  S  A  S  N  F  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_3166   91   AGTGGGTCTCATCCATTAATAGTGCTAGTAATTTCATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  92.0% (230/250)  IGHV3-21*01  137  ..................G....AG.....G..A....................................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  V  F  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  F  C  G  R  E  A  F  H  I  D  Y  
                    Query_3166   181  AGAACTCAGTCTTTCTGCAGATGAGCAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGGGAGAGAAGCCTTTCACATTGACTACT  270
V  92.0% (230/250)  IGHV3-21*01  227  ........C.G.A......A....A................................A.....C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------------.........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3166   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (42/42)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_132121

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           438     5e-125
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	71	0	0	100
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	113	1	0	99.1
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	290	285	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  
                    Query_3167   7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACT  96
V  98.3% (285/290)  IGHV5-51*03  5    ...............................................................................C.......G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      F  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  
                    Query_3167   97   TCTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCC  186
V  98.3% (285/290)  IGHV5-51*03  95   A...................................................G............................G........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_3167   187  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCG  276
V  98.3% (285/290)  IGHV5-51*03  185  ..........................................................................................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-------------CDR3-IMGT------------>                                  
                                      A  M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3167   277  CCATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  98.3% (285/290)  IGHV5-51*03  275  ....................----------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    ---------------------......C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_132126

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           297     7e-83
IGHD6-19*01                                                                                           12.2    31   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GGCTGG	AGGCAGCGC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCTGGAGGCAGCGCCTATTATTATGGTTTGGACGTC	ARAGGSAYYYGLDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	216	26	0	89.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  R  S  G  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_3168   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGAAGTGGCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  89.3% (216/242)  IGHV4-59*08  49   ..................A......................T...TA......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  Y  N  G  G  S  T  D  Y  N  P  S  L  R  S  R  V  T  I  S  A  D  T  S  K  K 
                    Query_3168   91   TGGATTGGATACTTCTATAATGGGGGGAGCACCGATTACAATCCCTCCCTCAGGAGTCGAGTCACCATCTCAGCAGACACGTCCAAGAAG  180
V  89.3% (216/242)  IGHV4-59*08  139  ........G..TA.....T.CA.T.........A.C.....C..........A...............A....T...............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  L  S  L  T  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  G  S  A  Y  Y  Y  G 
                    Query_3168   181  CAACTCTCCCTGACGGTGACCTCTGTGACCGCCGCAGACACGGCCGTTTACTACTGTGCGAGGGCTGGAGGCAGCGCCTATTATTATGGT  270
V  89.3% (216/242)  IGHV4-59*08  229  ..GT.........A.C...G...........................G..T...........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD6-19*01  13   --------------------------------------------------------------......----------------------  18
J  90.9% (50/55)    IGHJ6*02     8    -----------------------------------------------------------------------------...C..C..C...  20

                                      -------->                                 
                                       L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3168   271  TTGGACGTCTGGGGCCAAGGGACCACGGTCACTGTCTCCTCA  312
J  90.9% (50/55)    IGHJ6*02     21   A...............................C.........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_132127

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAGGG	AGTAGTGGTTATT	TTAGCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAGGGAGTAGTGGTTATTTTAGCCTC	ARRGSSGYFSL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  K  G  S  D  F  S  F  A  R  N
                    Query_3169   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGATTTCAGTTTTGCCAGGAA  90
V  94.8% (275/290)  IGHV5-51*01  6    ..........................................G............................GA.A...C...A....CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  H  D  S  D  T  R  Y  S  P
                    Query_3169   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTAGAGTGGATGGGGAACATCTATCCTCATGACTCTGATACCAGATACAGCCC  180
V  94.8% (275/290)  IGHV5-51*01  96   .......................................G.............T..........GG........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  T  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3169   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (275/290)  IGHV5-51*01  186  ...................................A.................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        M  Y  Y  C  A  R  R  G  S  S  G  Y  F  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3169   271  CATGTATTATTGTGCGAGACGAGGGAGTAGTGGTTATTTTAGCCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  94.8% (275/290)  IGHV5-51*01  276  .........C..........------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (13/13)   IGHD3-22*01  14   -------------------------.............------------------------------------------  26
J  100.0% (35/35)   IGHJ4*02     14   ---------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_132124

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           358     3e-101
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	N/A	N/A	CCCCGCATCGCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCCGCATCGCGTTTTGACTAC	ARGPASRFDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  F  G  G  S  F  R  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3170   1    ACCCTGTCCCTCACCTGCGCTGTCTTTGGTGGGTCCTTCAGGGGGTCCTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  96.7% (237/245)  IGHV4-34*01  49   .........................A...............T..T.A...........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_3170   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAATTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-34*01  139  ...................................C....................................G.................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  P  A  S  R  F  D  Y  W 
                    Query_3170   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGTCCGCCGCGGACACGGCTGTATATTACTGTGCGAGAGGCCCCGCATCGCGTTTTGACTACTGG  270
V  96.7% (237/245)  IGHV4-34*01  229  ...........................A...................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
J  100.0% (43/43)   IGHJ4*02     6    ------------------------------------------------------------------------------............  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_3170   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (43/43)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_132125

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            353     1e-99
IGHD3-10*01                                                                                           41.1    7e-08
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAAAAAGG	TTACTATGGTTCGGGGAGTTA	CCCCCTCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAAAAAGGTTACTATGGTTCGGGGAGTTACCCCCTCCACTACTTCTATCACGCTCTGGGCGTC	ARDQKGYYGSGSYPLHYFYHALGV	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  I  T  N  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3171   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCATTACTAACTTTTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-7*01   47   ......................................T...G..G..A.........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  N  G  N  E  R  Y  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_3171   91   AGTGGGTGGCCAACATAAAGGAAAATGGAAATGAGAGATACTATGTGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-7*01   137  ....................C..G......G.....A....................A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Q  K  G  Y  Y  G  
                    Query_3171   181  AGAACTCACTGTATCTGCAATTGAACAGCCTGAGAGCCGAGGACACCGCTGTGTATTACTGTGCGAGAGATCAAAAAGGTTACTATGGTT  270
V  95.2% (238/250)  IGHV3-7*01   227  ....................A.........................G.......................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (21/21)   IGHD3-10*01  4    -------------------------------------------------------------------------------...........  14

                                      ----CDR3-IMGT------------------------------>                                 
                                      S  G  S  Y  P  L  H  Y  F  Y  H  A  L  G  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3171   271  CGGGGAGTTACCCCCTCCACTACTTCTATCACGCTCTGGGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  347
D  100.0% (21/21)   IGHD3-10*01  15   ..........-------------------------------------------------------------------  24
J  89.8% (53/59)    IGHJ6*02     4    ------------------......A...CT...G.A...A.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_77087

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           444     6e-127
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ACCCTCGG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTCGGTGCTCTTGATATC	ARTLGALDI	289	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	74	1	0	98.7
CDR1-IMGT	76	99	24	24	0	0	100
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	112	2	0	98.2
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	294	289	5	0	98.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_3172   1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  90
V  98.3% (289/294)  IGHV1-18*01  1    .....T....................................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y 
                    Query_3172   91   AGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAATTAT  180
V  98.3% (289/294)  IGHV1-18*01  91   .........................................G.........................C..................C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_3172   181  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  270
V  98.3% (289/294)  IGHV1-18*01  181  .........C................................................................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><--------CDR3-IMGT-------->                                  
                                       T  A  V  Y  Y  C  A  R  T  L  G  A  L  D  I  W  G  Q  G  A  M  V  T  V  S  S  
                    Query_3172   271  ACGGCCGTGTATTACTGTGCGAGAACCCTCGGTGCTCTTGATATCTGGGGCCAAGGGGCAATGGTCACCGTCTCTTCAG  349
V  98.3% (289/294)  IGHV1-18*01  271  ........................-------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                        
J  95.7% (45/47)    IGHJ3*02     4    --------------------------------....T....................A.....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_68736

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            302     3e-84
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCTT	TTCGGGGA	A	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCTTTTCGGGGAAAACTGGTTCGGCCCC	ARRLFGENWFGP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	243	117	103	11	3	88
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	223	23	3	89.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Q  I  W  W  S  W  V  R  Q  A  P  G  K  G  L 
                    Query_3173   1    ACCCTGTCCCTCACCTGCACTGTTTCTGGTGGCTCCATCAGCAGTCAGATCTGGTGGAGTTGGGTCCGCCAGGCCCCAGGGAAGGGGCTT  90
V  89.6% (223/249)  IGHV4-4*02   49   ..................G....C.....................AGT.A......................C................G  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><-----------------------------------------------------
                                       E  W  I  G  E  I  L  H  S  G  G  T  T  T  Y  I  P  S  L  E  S  R  V  T  I  S  I  D  K  S 
                    Query_3173   91   GAGTGGATTGGGGAAATCCTTCATAGCGGGGGCACCACCACTTACATCCCGTCCCTCGAGAGTCGAGTCACCATCTCAATCGACAAGTCC  180
V  89.6% (223/249)  IGHV4-4*02   139  ..................TA......T...A......A.---....A..........A................A...G.A.........  225
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N     Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 

                                      FR3-IMGT------------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  R  L  F  G  E  N  W 
                    Query_3173   181  AAGAACCAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCGGACACGGCCATATATTATTGTGCGAGACGTCTTTTCGGGGAAAACTGG  270
V  89.6% (223/249)  IGHV4-4*02   226  ...................A......C........................G.G.....C.........---------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-10*01  13   ---------------------------------------------------------------------------........-------  20
J  95.9% (47/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  G  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3173   271  TTCGGCCCCTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  313
J  95.9% (47/49)    IGHJ5*02     9    ....A...........A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_337803

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD6-13*01                                                                                           12.2    36    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACAGACTAC	AALIAASHFTDY	292	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	71	3	0	95.9
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	103	11	0	90.4
CDR3-IMGT (germline)	292	294	3	3	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_3174   5    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCA  94
V  93.4% (271/290)  IGHV5-51*01  2    ....G.............................A...................................T...................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  V  P  G  Q  G  L  E  L  M  G  L  I  Y  P  G  D  S  D  T  W  Y  
                    Query_3174   95   CCTACTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCAAGGCCTGGAGTTGATGGGGCTCATCTATCCTGGTGACTCTGATACCTGGTACA  184
V  93.4% (271/290)  IGHV5-51*01  92   G.........................A........A............G.......A..........................A.A....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  T  S  A  Y  L  Q  W  T  T  L  K  A  S  D  
                    Query_3174   185  GTCCGTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCACCTCCGCCTACCTGCAGTGGACCACCCTGAAGGCCTCGGACA  274
V  93.4% (271/290)  IGHV5-51*01  182  .C......................C...................A...G.A..................G..G.................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3174   275  CCGCCATTTACTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACAGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  361
V  93.4% (271/290)  IGHV5-51*01  272  .......G..T.........-------------------------------------------------------------------  291
                                      T  A  M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    -------------------------...A.....-----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -----------------------------------------------.................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_77081

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           341     5e-96
IGHD2-2*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCTAAATGGATTCTCG	ATTGTGCTACTACCGGTTGCTAT	CTG	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCTAAATGGATTCTCGATTGTGCTACTACCGGTTGCTATCTGGACTTC	ARDPKWILDCATTGCYLDF	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  V  S  G  F  P  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_3175   1    GGTCCCTGAGACTCTCCTGTTCAGTCTCTGGATTCCCCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-11*01  47   ....................G...C..........A......................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  K  I  T  P  S  G  S  A  I  D  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_3175   91   AGTGGGTTTCAAAGATCACTCCTAGTGGCAGTGCCATAGACTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  93.6% (234/250)  IGHV3-11*01  137  ...........T.C..T.G.AG......T...A.....T..................A................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  L  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  P  K  W  I  L  D  
                    Query_3175   181  AGAACTTACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATATTACTGTGCGAGAGACCCTAAATGGATTCTCGATT  270
V  93.6% (234/250)  IGHV3-11*01  227  ......C...........................................G.G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  78.3% (18/23)    IGHD2-2*01   6    ---------------------------------------------------------------------------------------...  8

                                      -IMGT----------------------->                                  
                                      C  A  T  T  G  C  Y  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3175   271  GTGCTACTACCGGTTGCTATCTGGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  78.3% (18/23)    IGHD2-2*01   9    ..AG..G....A.C......-------------------------------------------  28
J  97.5% (39/40)    IGHJ4*02     9    -----------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_10734

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD6-19*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCG	GCAGTGGCGGGTAC	GGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCGGCAGTGGCGGGTACGGGATTGACTAC	AKDRGSGGYGIDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  H  T  C  S  V  S  G  G  S  I  S  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3176   1    ACCCTGTCCCACACCTGCTCTGTCTCTGGTGGCTCCATCAGTAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   ..........T.......A...........................A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  H  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_3176   91   TGGATTGGATATATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCACAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G...........C............................T......................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  T  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  D  R  G  S  G  G  Y  G  I 
                    Query_3176   181  CAGTTCACCCTGAGGCTGAACTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAAAGATCGCGGCAGTGGCGGGTACGGGATT  270
V  95.1% (233/245)  IGHV4-59*01  229  ......T......A.....G...........................G.............G...-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  8    ----------------------------------------------------------------------........T.....------  21
J  95.2% (40/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  G  L  V  T  V  S  S  
                    Query_3176   271  GACTACTGGGGCCAGGGAGGCCTGGTCACCGTCTCCTCAG  310
J  95.2% (40/42)    IGHJ4*02     9    ..................AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_77082

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           378     3e-107
IGHD2-21*02                                                                                           39.1    3e-07 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACGAGAA	CATGTTGTGGTGGTGACTGTTATTCC	TGACGTCGTAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACGAGAACATGTTGTGGTGGTGACTGTTATTCCTGACGTCGTATACTACTTTGATGAG	ARVREHVVVVTVIPDVVYYFDE	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  S  F  S  S  Y
                    Query_3177   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCTCCTTCAGCAGTTA  90
V  91.7% (266/290)  IGHV1-69*06  6    ............................................................................A..........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  S  W  L  R  Q  A  P  G  Q  G  L  E  W  V  G  G  I  I  P  I  F  P  T  A  E  Y  S  Q
                    Query_3177   91   TGTTATCAGTTGGCTGCGACAGGCCCCTGGGCAAGGGCTTGAGTGGGTGGGGGGGATCATCCCTATCTTTCCTACAGCAGAATACTCTCA  180
V  91.7% (266/290)  IGHV1-69*06  96   ..C......C...G................A...............A....A..................GG.......A.C...G.A..  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  R  G  R  V  T  I  T  A  D  K  T  T  S  T  V  Y  M  E  M  S  S  L  R  S  E  D  T  A
                    Query_3177   181  GAAGTTCCGGGGCAGAGTGACTATTACCGCGGACAAAACCACGAGCACAGTGTACATGGAGATGAGTAGCCTGAGATCTGAGGACACGGC  270
V  91.7% (266/290)  IGHV1-69*06  186  ........A.........C..G...............T............CC.........C....C.......................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------------CDR3-IMGT--------------------------->           
                                        I  Y  Y  C  A  R  V  R  E  H  V  V  V  V  T  V  I  P  D  V  V  Y  Y  F  D  E  W  G  Q  G
                    Query_3177   271  CATATATTACTGTGCGAGAGTACGAGAACATGTTGTGGTGGTGACTGTTATTCCTGACGTCGTATACTACTTTGATGAGTGGGGCCAGGG  360
V  91.7% (266/290)  IGHV1-69*06  276  .G.G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  92.3% (24/26)    IGHD2-21*02  3    ----------------------------...A...............C......------------------------------------  28
J  93.8% (45/48)    IGHJ4*02     1    -----------------------------------------------------------------..........CT.C...........  25

                                                             
                                        T  L  V  T  V  S  S  
                    Query_3177   361  AACCCTGGTCACCGTCTCCTCAG  383
J  93.8% (45/48)    IGHJ4*02     26   .......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_126767

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           286     1e-79
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCAGC	ATACATCTCTGGT	CACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAGCATACATCTCTGGTCACCCCTAC	SAYISGHPY	240	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	102	12	0	89.5
Total	N/A	N/A	239	211	28	0	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  V  S  V  H  Y  M  S  W  V  R  Q  A  P  G  R  G  L  
                    Query_3178   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCGTCAGTGTACACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAGGGGACTGG  90
V  88.3% (211/239)  IGHV3-53*01  47   ...............................G...A........AGCA.................................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  L  T  S  G  K  T  Y  Y  T  D  S  A  M  G  R  F  T  I  S  R  D  S  S  K  
                    Query_3178   91   AGTGGGTCTCAGCGATTCTTACCAGTGGTAAGACATACTACACAGACTCCGCGATGGGCCGATTCACCATCTCCAGAGACTCTTCCAAGA  180
V  88.3% (211/239)  IGHV3-53*01  137  ............TT...TA..G.G......GC.........G.........T..A.........................AA........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->    
                                      N  T  V  N  L  Q  M  N  S  L  S  A  G  D  T  A  F  Y  Y  C  S  A  Y  I  S  G  H  P  Y  W  
                    Query_3178   181  ACACAGTGAATCTTCAAATGAACAGCCTGAGCGCCGGGGACACGGCCTTCTATTACTGTTCAGCATACATCTCTGGTCACCCCTACTGGG  270
V  88.3% (211/239)  IGHV3-53*01  227  ....GC..T......................A....A..........G.G.........-------------------------------  285
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                                
D  84.6% (11/13)    IGHD5-18*01  5    ----------------------------------------------------------------.....G..A....-------------  17
J  100.0% (38/38)   IGHJ4*02     11   ----------------------------------------------------------------------------------........  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_3178   271  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  300
J  100.0% (38/38)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_3453

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           363     1e-102
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CAC	TATTCCTATGGTTCGAGGAGT	GC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACACTATTCCTATGGTTCGAGGAGTGCTTGACTTT	AKDTIPMVRGVLDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  S  S  H  A  M  S  W  A  R  Q  A  P  G  K  G  L  
                    Query_3179   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTAGCAGCCATGCCATGAGCTGGGCCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-23*01  47   ................................T..............T...............T..........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3179   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGGCACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  96.4% (241/250)  IGHV3-23*01  137  ...............................T.G...................................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  H  M  S  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  D  T  I  P  M  V  R  
                    Query_3179   181  AGAACACGCTGTATCTGCACATGAGCAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGACACTATTCCTATGGTTCGAG  270
V  96.4% (241/250)  IGHV3-23*01  227  ...................A....A.........................G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.5% (19/21)    IGHD3-10*01  2    -------------------------------------------------------------------------....A..........G.  18

                                      ------------->                                  
                                      G  V  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3179   271  GAGTGCTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  90.5% (19/21)    IGHD3-10*01  19   ....--------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    ------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_3452

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           366     2e-103
IGHD1-7*01                                                                                            16.1    2.5   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ACTGGAAATAC	ATAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTC	ARDRTGNTYYGLDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	16	8	0	66.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	262	28	0	90.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  N  D 
                    Query_3180   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTATACTTTCAGTAATGAT  91
V  90.3% (262/290)  IGHV1-18*01  7    ...............................A.................................T........C..C..T.CC.GCT..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  S  F  N  G  N  T  I  Y  A  Q 
                    Query_3180   92   GGTATTAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCTCTTTCAATGGAAACACAATCTACGCACAG  181
V  90.3% (262/290)  IGHV1-18*01  97   .....C............................................A.........G...A......T.......A...T......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  M  T  T  E  T  S  T  T  T  A  Y  M  E  L  R  S  L  T  Y  D  D  T  A 
                    Query_3180   182  AATTTACAGGGCAGAGTTACCATGACCACAGAAACTTCTACGACCACAGCCTACATGGAGCTGAGGAGCCTGACATATGACGACACGGCC  271
V  90.3% (262/290)  IGHV1-18*01  187  ..GC.C...........C..............C..A..C....G.............................G..C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                 
                                       V  Y  F  C  A  R  D  R  T  G  N  T  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3180   272  GTGTATTTCTGTGCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  358
V  90.3% (262/290)  IGHV1-18*01  277  .......A............-------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                      
D  90.9% (10/11)    IGHD1-7*01   7    ------------------------.......C...----------------------------------------------------  17
J  95.8% (46/48)    IGHJ6*02     15   ---------------------------------------......A....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_3451

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           333     1e-93
IGHD3-9*01                                                                                            44.9    5e-09
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGCCCTGA	ATTACGATATTTTCACTGGTTATTAT	TC	TGAGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGCCCTGAATTACGATATTTTCACTGGTTATTATTCTGAGTAC	VALNYDIFTGYYSEY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3181   1    GGTCCCTGAGACTCTCCTGTGCAACGTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCTGGCAAGGGGCTGG  90
V  93.8% (228/243)  IGHV3-33*01  47   .......................G.....................G..............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  W  H  D  G  S  K  R  Y  Y  A  D  F  V  K  G  R  F  T  I  S  R  D  E  S  
                    Query_3181   91   AGTGGGTGTCAGTTATATGGCATGATGGAAGTAAAAGATACTATGCAGACTTCGTGAAGGGCCGATTCACCATCTCCAGAGACGAGTCCA  180
V  93.8% (228/243)  IGHV3-33*01  137  ........G...........T.............T.A..............C...............................A.T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  S  A  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  V  A  L  N  Y  D  I  F  T  
                    Query_3181   181  AGAGCGCACTGTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCTGTCTATTACTGTGTGGCCCTGAATTACGATATTTTCACTG  270
V  93.8% (228/243)  IGHV3-33*01  227  ...A.A.G............................C...............G..........---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  96.2% (25/26)    IGHD3-9*01   3    ------------------------------------------------------------------------.............G....  20

                                      ---------------->                                  
                                      G  Y  Y  S  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3181   271  GTTATTATTCTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  96.2% (25/26)    IGHD3-9*01   21   ........-------------------------------------------  28
J  97.6% (40/41)    IGHJ4*02     8    ----------...C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_3450

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           364     6e-103
IGHD2-2*01                                                                                            14.1    10.0  
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CCCGGA	TAGTACC	GCGGCGGT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGACACCCGGATAGTACCGCGGCGGTCTACTTTTACTACGGTATGGACGTC	TRHPDSTAAVYFYYGMDV	295	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	66	8	0	89.2
CDR1-IMGT	76	99	24	18	6	0	75
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	180	30	26	4	0	86.7
FR3-IMGT	181	294	114	100	14	0	87.7
CDR3-IMGT (germline)	295	302	8	8	0	0	100
Total	N/A	N/A	301	267	34	0	88.7


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  G  G  L  V  Q  P  G  G  S  L  T  P  S  C  E  A  S  G  F  S  F  S  
                    Query_3182   2    AGGTCCAGCTTGTGCAGTCTGGAGGAGGCTTGGTCCAACCTGGGGGGTCCCTGACACCCTCCTGTGAAGCCTCTGGATTCAGCTTTAGTG  91
V  88.7% (267/301)  IGHV3-73*01  2    ....G.....G...G.......G..............G................A..T........C.........G....C...C....  91
                                         V  Q  L  V  E  S  G  G  G  L  V  Q  P  G  G  S  L  K  L  S  C  A  A  S  G  F  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><----------CDR2-IMGT---------><
                                      A  S  S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  L  G  R  I  R  R  E  S  N  S  Y  A  T  
                    Query_3182   92   CCTCTAGTATGCACTGGGTCCGCCAGGCTCCCGGGAAAGGGCTGGAGTGGCTTGGCCGTATTAGAAGGGAGTCTAACAGTTACGCGACAG  181
V  88.7% (267/301)  IGHV3-73*01  92   G....GC......................T....................G................CA.AG..................  181
                                      G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  

                                      ----------------------------------------------------FR3-IMGT------------------------------
                                      E  Y  A  A  S  V  K  G  R  F  I  I  S  R  D  D  G  K  N  A  A  Y  L  Q  M  N  N  L  R  L  
                    Query_3182   182  AATATGCTGCGTCGGTGAAAGGCAGGTTCATCATCTCCAGAGATGATGGAAAGAATGCGGCGTACCTGCAAATGAACAACCTGAGGCTCG  271
V  88.7% (267/301)  IGHV3-73*01  182  C.............................C................TC......CA.......T.............G.....AAAC..  271
                                      A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  

                                      ----------------------><----------------------CDR3-IMGT--------------------->             
                                      E  D  T  A  I  Y  Y  C  T  R  H  P  D  S  T  A  A  V  Y  F  Y  Y  G  M  D  V  W  G  Q  G  
                    Query_3182   272  AGGACACGGCCATATATTACTGTACTAGACACCCGGATAGTACCGCGGCGGTCTACTTTTACTACGGTATGGACGTCTGGGGCCAGGGGA  361
V  88.7% (267/301)  IGHV3-73*01  272  ...........G.G.................-----------------------------------------------------------  302
                                      E  D  T  A  V  Y  Y  C  T  R                                                              
D  100.0% (7/7)     IGHD2-2*01   13   -------------------------------------.......----------------------------------------------  19
J  94.8% (55/58)    IGHJ6*02     5    ----------------------------------------------------.....AC..........................A....  42

                                                          
                                      T  T  V  T  V  S  S 
                    Query_3182   362  CCACGGTCACCGTCTCCTCA  381
J  94.8% (55/58)    IGHJ6*02     43   ....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_3456

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           350     8e-99
IGHD2-21*02                                                                                           14.1    8.5  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CATCGAACGTCACTATTTATA	TGGTGCCTGC	CCTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACATCGAACGTCACTATTTATATGGTGCCTGCCCTGGCTAC	AKDIERHYLYGACPGY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3183   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-30*18  47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  F  D  G  S  N  R  N  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3183   91   AGTGGGTGGCACTTATATCCTTTGATGGAAGTAACAGAAATCATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (237/250)  IGHV3-30*18  137  ...........G.......A.A............T.A.T.CT................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  I  E  R  H  Y  L  
                    Query_3183   181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGACCTGAAGACACGGCTGTATATTACTGTGCGAAAGACATCGAACGTCACTATTTAT  270
V  94.8% (237/250)  IGHV3-30*18  227  ...A...............................G....G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      T------------------>                                 
                                      Y  G  A  C  P  G  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_3183   271  ATGGTGCCTGCCCTGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  323
D  90.0% (9/10)     IGHD2-21*02  13   -.....A....------------------------------------------  22
J  100.0% (37/37)   IGHJ4*02     11   ----------------.....................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_3454

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           336     1e-94
IGHD5-12*01                                                                                           12.2    33   
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GTCCCCAGCC	GTGGAT	CGTGCACTGGGATGGAGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGTCCCCAGCCGTGGATCGTGCACTGGGATGGAGGTGCTTTTGATATC	AKGPQPWIVHWDGGAFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  F  G  M  N  W  V  R  Q  A  A  G  K  G  P  
                    Query_3184   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTCAGTAGCTTTGGCATGAACTGGGTCCGCCAGGCTGCAGGCAAGGGGCCGG  90
V  93.2% (232/249)  IGHV3-30*18  47   ....................................CC..........A.......C.................C............T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  A  D  D  G  S  E  N  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_3184   91   AGTGGGTGGCAGTTATAGCAGATGATGGAAGTGAGAACTATTATGCAGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.2% (232/249)  IGHV3-30*18  137  .................T..T...........A.T..A..C...............A.................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  S  T  L  Y  L  Q  M  N  N  L  R  D  E  D  T  A  V  Y  Y  C  A  K  G  P  Q  P  W  I  V  
                    Query_3184   181  AGAGCACGCTGTATCTGCAAATGAACAACCTGAGAGATGAGGACACAGCTGTGTATTACTGTGCGAAAGGTCCCCAGCCGTGGATCGTGC  270
V  93.2% (232/249)  IGHV3-30*18  227  ...A.......................G........C.........G......................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD5-12*01  1    -------------------------------------------------------------------------------......-----  6

                                      IMGT--------------------->                                 
                                      H  W  D  G  G  A  F  D  I  W  G  Q  G  T  R  V  T  V  S  S 
                    Query_3184   271  ACTGGGATGGAGGTGCTTTTGATATCTGGGGCCAAGGGACAAGGGTCACCGTCTCTTCA  329
J  97.8% (45/46)    IGHJ3*02     4    -------------.............................T................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_3459

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGGGTTGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGGGTTGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	247	223	21	3	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_3185   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  87
V  90.3% (223/247)  IGHV4-4*02   49   ..................GC.........T...TCC......A..AG........GG.......................G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  K 
                    Query_3185   88   GAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCAAG  177
V  90.3% (223/247)  IGHV4-4*02   139  .......................T......A................................G.......A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G  W 
                    Query_3185   178  AATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGGGTTGGTAGCAGTGGCTGG  267
V  90.3% (223/247)  IGHV4-4*02   229  ..CC.GT..........G....GC..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-19*01  6    -----------------------------------------------------------------------------.............  18

                                      -------->                                
                                       L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_3185   268  CTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  308
J  95.0% (38/40)    IGHJ4*02     7    -......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_282435

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           353     1e-99
IGHD3-10*01                                                                                           14.1    9.7  
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	CCATATGGATCCCTTCTATGATTCTACAGGC	AGTTATT	CC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGCCATATGGATCCCTTCTATGATTCTACAGGCAGTTATTCCTTTGACCTC	VSHMDPFYDSTGSYSFDL	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	288	257	31	0	89.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  V  S  G  Y  R  F  T  S  K
                    Query_3186   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGAGTCTCTGGATACAGGTTTACCAGCAA  90
V  89.2% (257/288)  IGHV5-51*03  6    ..............................................................AG.GT...........C.........T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  T  W  V  R  H  M  P  G  Q  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_3186   91   ATGGATCACCTGGGTGCGCCACATGCCCGGACAAGGCCTGGAGTGGATGGGCGTCATCTATCCTGGTGACTCTGATACCAGATACAACCC  180
V  89.2% (257/288)  IGHV5-51*03  96   C......GG............G........GA...................GA.................................G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  R  I  S  I  S  A  D  K  S  T  S  T  A  S  L  Q  W  G  F  R  R  A  S  D  T  A
                    Query_3186   181  GTCCTTCCAAGGCCGGATCAGCATTTCAGCCGACAAGTCCACCAGCACTGCCTCCCTGCAGTGGGGCTTCCGGCGGGCCTCGGACACTGC  270
V  89.2% (257/288)  IGHV5-51*03  186  ..............A.G...C...C................T......C....A..........A..AG..T.AA............C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  V  S  H  M  D  P  F  Y  D  S  T  G  S  Y  S  F  D  L  W  G  Q  G  T  M  V  T
                    Query_3186   271  CATGTACTACTGTGTGAGCCATATGGATCCCTTCTATGATTCTACAGGCAGTTATTCCTTTGACCTCTGGGGCCAAGGGACAATGGTCAC  360
V  89.2% (257/288)  IGHV5-51*03  276  ......T.......C...------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  100.0% (7/7)     IGHD3-10*01  20   -------------------------------------------------.......----------------------------------  26
J  93.0% (40/43)    IGHJ3*01     8    ----------------------------------------------------------.....TG.........................  39

                                                 
                                        V  S  S  
                    Query_3186   361  CGTCTCCTCAG  371
J  93.0% (40/43)    IGHJ3*01     40   ......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_282432

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           332     3e-93
IGHD3-22*01                                                                                           46.8    1e-09
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	C	TATTACTATGAAAGTAGTGCTTATTACTAC	GGCAGG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGACTATTACTATGAAAGTAGTGCTTATTACTACGGCAGG	AKDYYYESSAYYYGR	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  G  G  F  R  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3187   1    GGTCCCTGAGACTCTCCTGTGCAGGCGGTGGATTCAGGTTCAGTTCCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-30*18  47   ........................C.TC........CC......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  S  D  G  S  I  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_3187   91   AGTGGGTGGCAGTAATATCATCTGATGGAAGCATTAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATCCCC  180
V  92.4% (231/250)  IGHV3-30*18  137  .............T.......A.........T.A....................................................T..A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      Q  F  T  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  Y  Y  Y  E  S  S  
                    Query_3187   181  AGTTCACGTTGCATTTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCCAAAGACTATTACTATGAAAGTAGTG  270
V  92.4% (231/250)  IGHV3-30*18  227  ..AA....C..T..C.................................................G.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (28/30)    IGHD3-22*01  2    -----------------------------------------------------------------------...........T.......  20

                                      ---------------->                                  
                                      A  Y  Y  Y  G  R  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_3187   271  CTTATTACTACGGCAGGTGGGGCCAGGGAACCCAAGTCACCGTCTCCTCAG  321
D  93.3% (28/30)    IGHD3-22*01  21   G..........----------------------------------------  31
J  94.1% (32/34)    IGHJ4*02     15   -----------------................TG................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_282433

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           299     2e-83
IGHD5-12*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAGA	TGGCTACAATTAC	AGTCAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGATGGCTACAATTACAGTCAGGACTAC	ARLDGYNYSQDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	217	26	0	89.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  K  G  G  S  F  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_3188   1    ACCCTGTCCCTCACCTGCGCTGTCAAAGGTGGGTCCTTCAATCATTTCTACTGGAGTTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  89.3% (217/243)  IGHV4-34*01  49   ........................T.T.............G.GG..A.........C............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  K  Y  N  P  S  L  E  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_3188   91   TGGATTGGCGAAATCAATCACAGTGGACGCACCAAGTACAACCCGTCCCTCGAGAGTCGAGTCACCATCTCATTGGACACCTCCAAAAAC  180
V  89.3% (217/243)  IGHV4-34*01  139  ........G...........T......A.......C...............A................A...G.A.....G.....G...  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  K  L  K  S  V  T  A  A  D  T  A  L  H  Y  C  A  R  L  D  G  Y  N  Y  S  Q  D 
                    Query_3188   181  CACTTCTCCCTGAAACTGAAGTCTGTCACCGCCGCGGACACGGCTCTTCATTACTGTGCGAGACTAGATGGCTACAATTACAGTCAGGAC  270
V  89.3% (217/243)  IGHV4-34*01  229  ..G...........G....GC.....G..................G.GT..............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.3% (12/13)    IGHD5-12*01  11   --------------------------------------------------------------------.......G.....---------  23
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       Y  W  G  K  G  T  L  V  T  V  S  S  
                    Query_3188   271  TACTGGGGCAAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   .........C...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_282430

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            330     1e-92
IGHD3-16*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCAGCCTGATCGGGACAG	TGCTTAT	N/A	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCAGCCTGATCGGGACAGTGCTTATTAC	ASQPDRDSAYY	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  I  S  G  V  S  F  S  R  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_3189   1    ACCCTGTCCCTCACCTGCGCTATATCTGGTGTCTCCTTCAGTAGAAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  93.1% (228/245)  IGHV4-4*02   49   .....................G.C.......G....A....C..T.G.......................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  D  S  G  S  T  N  Y  N  E  S  L  K  S  R  V  T  I  S  I  D  K  S  K 
                    Query_3189   91   GAGTGGATTGGGGAAATCTCTGATAGTGGGAGCACCAACTACAACGAGTCTCTCAAGAGTCGAGTCACCATATCAATAGACAAGTCCAAG  180
V  93.1% (228/245)  IGHV4-4*02   139  ...................A.C.......................CC...C........................G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  H  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  Q  P  D  R  D  S  A  Y 
                    Query_3189   181  AACCAATTCTCCCTGCATCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGCCAGCCTGATCGGGACAGTGCTTAT  270
V  93.1% (228/245)  IGHV4-4*02   229  .....G.........A.G...............................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-16*01  28   -----------------------------------------------------------------------------------.......  34

                                      -->                                  
                                       Y  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_3189   271  TACTGGGGCCAGGGAACCCTGGCCACCGTCTCCTCAG  307
J  97.3% (36/37)    IGHJ4*02     12   ......................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_282431

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_3190   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_3190   91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_3190   181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_3190   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_251487

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         336     1e-94
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	N/A	N/A	TCACCTGCCAACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGATCACCTGCCAACCCCTACTACCACGCTCTGGACGTC	ARSPANPYYHALDV	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  V  Y  I  S  N  G  G  Y  S  W  T  W  I  R  Q  P  P  G  R  G 
                    Query_3191     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTACATCAGCAATGGTGGTTACTCCTGGACCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  93.2% (232/249)  IGHV4-30-2*01  49   ..................G............G..C........G.................G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Q  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  R  S 
                    Query_3191     91   CTGGAGTGGATTGGGTACATCTATCAAAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGCGTCACCATATCGGTAGACAGGTCC  180
V  93.2% (232/249)  IGHV4-30-2*01  139  ..........................T...............................A......A...........A............  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  V  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  A  N  P  Y  Y 
                    Query_3191     181  AAGAACCAGTTCTCCGTTAACTTGAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGCGCCAGATCACCTGCCAACCCCTACTAC  270
V  93.2% (232/249)  IGHV4-30-2*01  229  ...............C.G..GC....C..........................G........T......---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  92.7% (51/55)    IGHJ6*02       8    -----------------------------------------------------------------------------------.......  14

                                        -------------->                                 
                                         H  A  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3191     271  CACGCTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  318
J  92.7% (51/55)    IGHJ6*02       15   T...G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_251486

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           330     1e-92
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	GGTAAAGGCCCCGGAGGGCGCC	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTAAAGGCCCCGGAGGGCGCCTACTTCTCCTACTCCGGGATGGACGTC	ARVKAPEGAYFSYSGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	229	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  D  Y  T  L  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3192   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTCAGTGATTATACTCTGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  92.7% (229/247)  IGHV3-21*01  47   ........................C...................AGC....GCA...............................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  S  S  G  Y  Y  I  Y  Y  A  D  S  V  N  G  R  F  T  I  S  R  D  N  A  
                    Query_3192   91   AGTGGGTCTCATCCGTTAGCAGTAGTGGTTATTACATATACTACGCAGACTCAGTGAACGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.7% (229/247)  IGHV3-21*01  137  ..............A....T......A..AG...........................G...............................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  V  Y  L  Q  M  N  N  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  K  A  P  E  G  A  
                    Query_3192   181  AGAACTCAGTGTATCTGCAAATGAACAACCTGAGAGCCGACGACACGGCTGTTTATTACTGTGCGAGGGTAAAGGCCCCGGAGGGCGCCT  270
V  92.7% (229/247)  IGHV3-21*01  227  ........C..................G............G...........G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  90.0% (54/60)    IGHJ6*02     3    -----------------------------------------------------------------------------------------.  3

                                      IMGT--------------------->                                 
                                      Y  F  S  Y  S  G  M  D  V  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_3192   271  ACTTCTCCTACTCCGGGATGGACGTCTGGGGCCAGGGGACCGCGGTCACCGTCTCCTCA  329
J  90.0% (54/60)    IGHJ6*02     4    ...A..A.....A...T.................A......A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_251485

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            392     2e-111
IGHD7-27*01                                                                                           10.3    124   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	AGAGGGC	CTGGG	TTGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGAAGAGGGCCTGGGTTGGTTGACTAC	AHRRGPGLVDY	263	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	27	3	0	90
FR2-IMGT	77	127	51	49	2	0	96.1
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	111	3	0	97.4
CDR3-IMGT (germline)	263	271	9	9	0	0	100
Total	N/A	N/A	271	261	10	0	96.3


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  T  T  G  G  V  A  V  A  W  I  R
                    Query_3193   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCACCACTGGTGGAGTGGCTGTGGCCTGGATCCG  90
V  96.3% (261/271)  IGHV2-5*01   30   ...........................................................G....A.........G.....G.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  D  W  L  A  L  I  D  G  N  D  D  K  R  F  S  P  S  L  K  S  R  L  T
                    Query_3193   91   TCAGCCCCCAGGAAAGGCCCTGGACTGGCTTGCACTCATTGATGGGAATGATGATAAGCGCTTCAGCCCATCTCTGAAGAGCAGGCTCAC  180
V  96.3% (261/271)  IGHV2-5*01   120  ........................G...............T..T..................A...........................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  G  P  V  D  T  A  T  Y  H  C  A  H  R
                    Query_3193   181  CATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGGCCCTGTGGACACAGCCACATATCACTGTGCACACAG  270
V  96.3% (261/271)  IGHV2-5*01   210  .....................................................A......................T.............  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  R

                                      ----CDR3-IMGT----------->                                  
                                        R  G  P  G  L  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3193   271  AAGAGGGCCTGGGTTGGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  329
V  96.3% (261/271)  IGHV2-5*01   300  .----------------------------------------------------------  300
                                                                                                 
D  100.0% (5/5)     IGHD7-27*01  5    --------.....----------------------------------------------  9
J  100.0% (42/42)   IGHJ4*02     7    -----------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_251484

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           327     1e-91
IGHD3-22*01                                                                                           16.1    2.5  
IGHJ3*01                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGATCCCTT	CTATGATA	CTACAGGAAGTTATTCCTTTGACCTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACATATGGATCCCTTCTATGATACTACAGGAAGTTATTCCTTTGACCTT	VRHMDPFYDTTGSYSFDL	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	43	8	0	84.3
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	93	21	0	81.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	250	41	0	85.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  V  S  G  Y  R  F  T  S  K
                    Query_3194   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGAGTCTCTGGATACAGGTTTACCAGCAA  90
V  85.9% (250/291)  IGHV5-51*01  6    ....................................C.........................AG.GT...........C.........T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  T  W  V  R  H  M  P  G  Q  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  I  R  Y  N  P
                    Query_3194   91   ATGGATCACCTGGGTGCGCCACATGCCCGGACAGGGCCTGGAGTGGATGGGCGTCATCTATCCCGGAGACTCTGATATCAGATACAACCC  180
V  85.9% (250/291)  IGHV5-51*01  96   C......GG............G........GA.A.................GA..........T..T..........C........G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  R  I  S  I  S  A  D  E  S  T  N  T  A  S  L  H  W  G  F  L  R  A  S  D  T  A
                    Query_3194   181  GTCCTTCCAAGGCCGGATCAGCATTTCAGCCGACGAGTCCACCAACACTGCCTCTCTGCACTGGGGCTTCCTGCGGGCCTCGGACACTGC  270
V  85.9% (250/291)  IGHV5-51*01  186  ..............A.G...C...C.........A......T..G...C....AC.....G...A..AG....AA............C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        I  Y  Y  C  V  R  H  M  D  P  F  Y  D  T  T  G  S  Y  S  F  D  L  W  G  Q  G  T  M  V  T
                    Query_3194   271  CATATACTATTGTGTGAGACATATGGATCCCTTCTATGATACTACAGGAAGTTATTCCTTTGACCTTTGGGGCCAAGGGACAATGGTCAC  360
V  85.9% (250/291)  IGHV5-51*01  276  ...G..T..C....C......---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-22*01  7    ---------------------------------........-------------------------------------------------  14
J  97.1% (33/34)    IGHJ3*01     17   -------------------------------------------------------------------.......................  39

                                                 
                                        V  S  S  
                    Query_3194   361  CGTCTCCTCAG  371
J  97.1% (33/34)    IGHJ3*01     40   ......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_251483

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     3e-93
IGHD2-21*02                                                                                           10.3    116  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  T  H  H  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3195   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGTACTCACCACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*08  49   ..................A........................G.T..T.......C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_3195   91   TGGATTGGATATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-59*08  139  ........G........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_3195   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  93.4% (228/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_3195   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_251482

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           305     3e-85
IGHD5-12*01                                                                                           14.1    8.6  
IGHJ4*02                                                                                              46.8    3e-09


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGATAGAT	GTGGATTTAG	GCAACACGCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGATAGATGTGGATTTAGGCAACACGCCTGACTTC	ARAPIDVDLGNTPDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	222	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  R  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3196   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTTCATTCAGGAGTTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  89.2% (222/249)  IGHV3-74*01  47   ..................................CA.C.....T..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  A  R  I  D  S  Y  G  S  D  T  F  Y  A  G  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3196   91   TTTGGGTCGCGCGTATTGATAGTTACGGAAGTGACACCTTCTATGCGGGCTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCG  180
V  89.2% (222/249)  IGHV3-74*01  137  .G......T.A......A.....G.T..G...AG...AAG...C....A...............A........................A  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  T  L  S  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  F  C  A  R  A  P  I  D  V  D  L  
                    Query_3196   181  AGAACACGCTGTCTCTGCAGATGAACAGTCTGAGAGTCGACGACACGGCTGTGTATTTCTGTGCGAGAGCCCCGATAGATGTGGATTTAG  270
V  89.2% (222/249)  IGHV3-74*01  227  ............A......A................C...G................A......A....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD5-12*01  1    --------------------------------------------------------------------------------......A...  10

                                      ---------------->                                
                                      G  N  T  P  D  F  W  G  Q  G  V  L  V  S  V  S  S
                    Query_3196   271  GCAACACGCCTGACTTCTGGGGCCAGGGGGTCCTGGTCTCCGTCTCCTC  319
J  87.2% (34/39)    IGHJ4*02     8    ----------.....A............AAC.......A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_251481

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           308     4e-86
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTGG	AGCAGTGGCTGGT	CGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTGGAGCAGTGGCTGGTCGGTTTGACTTC	AREGGAVAGRFDF	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	224	27	0	89.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  R  G  S  V  S  S  G  G  Y  H  W  S  W  I  R  Q  T  P  G  R  G 
                    Query_3197   1    ACCCTGTCCCTCACCTGCTCTGTCTCTCGTGGCTCCGTCAGCAGTGGGGGTTATCACTGGTCCTGGATCCGGCAGACCCCAGGCAGGGGA  90
V  89.2% (224/251)  IGHV4-61*08  49   ..................A........G...................T.....CT.....AG.............C.......G.A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  F  T  G  T  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  A  D  M  S 
                    Query_3197   91   CTGGAGTGGATTGGCTATATCCACTTCACTGGGACCACCAAGTACAACCCCTCCCTTAAGAGTCGAGTCAGCATATCAGCAGACATGTCC  180
V  89.2% (224/251)  IGHV4-61*08  139  ..............G......T.T.A..G.....G......C..............C.............C........T.....C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  A  V  A  G 
                    Query_3197   181  AAGAACCAATTCTCCCTGAACCTGAGGTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTGCGAGAGAGGGTGGAGCAGTGGCTGGT  270
V  89.2% (224/251)  IGHV4-61*08  229  ........G...........G.....C..........................G..T..C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD6-19*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------->                                  
                                       R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3197   271  CGGTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02     6    ---.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_251480

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           300     8e-84
IGHD2-15*01                                                                                           12.2    32   
IGHJ3*01                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGCCG	GGTAGC	GTCC	CTTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATGGGCCGGGTAGCGTCCCTTATGATGTT	VRDGPGSVPYDV	249	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	110	57	45	6	6	78.9
CDR2-IMGT	111	134	24	19	5	0	79.2
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	256	8	6	2	0	75
Total	N/A	N/A	256	226	24	6	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><-----------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  A  S  R  F  S  F  R  S  H  W  M  N  W  L  R  Q  V  P  G  K  G  Q  
                    Query_3198   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTAGATTCAGCTTCAGGAGCCACTGGATGAACTGGCTCCGCCAAGTTCCAGGGAAGGGGCAGG  90
V  88.3% (226/256)  IGHV3-74*01  47   .............................G......C......T...T........C.....G.........C............-----  131
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G     

                                      -------------------><-------CDR2-IMGT------><---------------------------------------------
                                      G  L  V  W  L  S  H  I  N  P  D  G  T  R  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  
                    Query_3198   91   GGCTGGTGTGGCTTTCACATATTAATCCTGATGGGACCAGAACAAATTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACG  180
V  88.3% (226/256)  IGHV3-74*01  132  -..........G.C....G.......AG........GT..C....GC..........................................A  220
                                         L  V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------CDR3-IMG
                                      D  A  K  D  T  L  F  L  Q  M  T  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  G  P  G  S  
                    Query_3198   181  ACGCCAAGGACACGCTGTTTCTGCAAATGACCAGTCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGTGAGAGATGGGCCGGGTAGCG  270
V  88.3% (226/256)  IGHV3-74*01  221  ........A.........A...........A.................................C....CA.....--------------  296
                                      N  A  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                 
D  100.0% (6/6)     IGHD2-15*01  17   -----------------------------------------------------------------------------------......-  22

                                      T------------>                                  
                                      V  P  Y  D  V  W  G  Q  G  I  M  V  T  V  S  P  
                    Query_3198   271  TCCCTTATGATGTTTGGGGCCAAGGGATCATGGTCACCGTGTCTCCAG  318
J  86.7% (39/45)    IGHJ3*01     6    ---...T......C.............CA...........C...T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_251489

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           226     3e-61
IGHD2-21*02                                                                                           14.1    8.5  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CACTGAGAGGGGAGGCC	GACGGCTATT	TT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACTGAGAGGGGAGGCCGACGGCTATTTTTACTACGGTATGGACGTC	ATLRGEADGYFYYGMDV	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	42	9	0	82.4
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	91	23	0	79.8
CDR3-IMGT (germline)	240	243	4	4	0	0	100
Total	N/A	N/A	240	192	48	0	80


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  Y  N  W  S  S  S  G  Y  Y  W  N  W  V  R  Q  R  P  G  Q  G  L  E  
                    Query_3199   4    CCCTGAGACTCTCCTGCACTGTCTACAATTGGTCCTCCAGTGGTTACTATTGGAACTGGGTACGGCAGCGCCCCGGTCAGGGGCTGGAGT  93
V  80.0% (192/240)  IGHV4-34*01  50   .....TCC...A.....G.......TGG.G......T............C....G....A.C..C....C...A..GA............  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  S  H  S  G  S  T  W  Y  N  P  T  L  E  G  R  A  T  I  S  V  G  R  S  N  N  
                    Query_3199   94   GGATTGGCGAAATCAGTCATAGTGGGTCCACGTGGTATAATCCGACCCTCGAGGGTCGAGCCACCATATCAGTGGGCAGGTCCAACAATG  183
V  80.0% (192/240)  IGHV4-34*01  140  .......G.......A.........AAG...CAAC..C..C...T.....A..A......T............A.A..C......G..CC  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      V  F  S  L  R  L  T  S  V  T  A  A  D  T  S  V  Y  Y  C  A  T  L  R  G  E  A  D  G  Y  F  
                    Query_3199   184  TCTTCTCCCTGAGGTTGACCTCCGTGACCGCCGCGGACACGTCTGTCTATTACTGTGCGACACTGAGAGGGGAGGCCGACGGCTATTTTT  273
V  80.0% (192/240)  IGHV4-34*01  230  AG..........A.C...G...T..................G....G.............------------------------------  289
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  90.0% (9/10)     IGHD2-21*02  17   -----------------------------------------------------------------------------...T......---  26
J  98.0% (50/51)    IGHJ6*02     12   -----------------------------------------------------------------------------------------.  12

                                      ---------------->                                 
                                      Y  Y  G  M  D  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_3199   274  ACTACGGTATGGACGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCCTCA  323
J  98.0% (50/51)    IGHJ6*02     13   ................................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_251488

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           12.2    38    
IGHJ3*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ATAGCGGAAACTACT	TATGTTAGAGACTC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGATAGCGGAAACTACTTATGTTAGAGACTCTGATGCTTTTGATATC	ARDRIAETTYVRDSDAFDI	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	106	8	0	93
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	279	17	0	94.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  N 
                    Query_3200   4    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTCAAT  93
V  94.3% (279/296)  IGHV1-18*01  1    .....T.................................................................T..............T.CC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  F  V  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 
                    Query_3200   94   AACTATGGTTTCGTCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTAT  183
V  94.3% (279/296)  IGHV1-18*01  91   .G.......A..AG............................................................................  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  K  G  R  F  T  M  T  T  D  T  S  T  S  T  A  S  V  E  L  R  S  L  R  S  D  D 
                    Query_3200   184  GCACAGAAATTCAAGGGCAGATTCACCATGACCACGGACACATCCACGAGCACAGCCTCCGTGGAGCTGAGGAGCCTGAGATCTGACGAC  273
V  94.3% (279/296)  IGHV1-18*01  181  ........GC..C........G.............A......................A.A.............................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  V  Y  Y  C  A  R  D  R  I  A  E  T  T  Y  V  R  D  S  D  A  F  D  I  W  G  Q  G  T 
                    Query_3200   274  ACGGCCGTGTATTACTGCGCGAGAGATCGGATAGCGGAAACTACTTATGTTAGAGACTCTGATGCTTTTGATATCTGGGGCCAAGGGACA  363
V  94.3% (279/296)  IGHV1-18*01  271  .................T........----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  80.0% (12/15)    IGHD1-26*01  4    ------------------------------....T..G.G.....---------------------------------------------  18
J  100.0% (50/50)   IGHJ3*02     1    -----------------------------------------------------------...............................  31

                                                         
                                       M  V  T  V  S  S  
                    Query_3200   364  ATGGTCACCGTCTCTTCAG  382
J  100.0% (50/50)   IGHJ3*02     32   ...................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_10573

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         375     3e-106
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GCCTTCGGG	ACTATGTTTCGGGGAATTA	CT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGCCTTCGGGACTATGTTTCGGGGAATTACTACAACTGGTTCGACCCC	ARGLRDYVSGNYYNWFDP	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_3201     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  98.0% (245/250)  IGHV4-30-4*01  49   ..................A..............................A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3201     91   CTGGAGTGGATTGGGTACATCTATTACAGTGGAAGCACCTACTACAACCCGTCTCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  98.0% (245/250)  IGHV4-30-4*01  139  ................................G....................C....................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R  G  L  R  D  Y  V  S 
                    Query_3201     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTGCTGTGCCAGAGGCCTTCGGGACTATGTTTCG  270
V  98.0% (245/250)  IGHV4-30-4*01  229  ..........................................................A...........--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.5% (17/19)    IGHD3-10*01    6    -------------------------------------------------------------------------------......G....  16

                                        -IMGT--------------------->                                  
                                         G  N  Y  Y  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3201     271  GGGAATTACTACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  89.5% (17/19)    IGHD3-10*01    17   ....G...-----------------------------------------------------  24
J  100.0% (51/51)   IGHJ5*02       1    ----------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_10571

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD3-22*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGCCGT	TGGTTAT	AATTCCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGCCGTTGGTTATAATTCCGACTACTACTTCGGTATGGACGTC	ASAVGYNSDYYFGMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	277	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_3202   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  96.2% (277/288)  IGHV5-51*01  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  Y  P  G  D  S  D  T  R  *  R  P
                    Query_3202   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGACTGGAGTGGATGGGGTTCATCTATCCTGGTGACTCGGATACCAGATAAAGACC  180
V  96.2% (277/288)  IGHV5-51*01  96   ....................................C...............A...................T...........C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  L  V  T  I  S  A  N  K  A  I  S  T  A  Y  L  L  W  S  S  L  K  A  S  D  S  A
                    Query_3202   181  GTCCTTCCAAGGCCTGGTCACCATCTCAGCCAACAAGGCCATCAGCACCGCCTACCTGCTGTGGAGCAGCCTGAAGGCCTCGGACTCCGC  270
V  96.2% (277/288)  IGHV5-51*01  186  ..............A................G.....T.....................A.........................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        M  Y  Y  F  A  S  A  V  G  Y  N  S  D  Y  Y  F  G  M  D  V  W  G  Q  G  T  A  V  T  V  S
                    Query_3202   271  CATGTATTACTTTGCGAGCGCCGTTGGTTATAATTCCGACTACTACTTCGGTATGGACGTCTGGGGCCAAGGGACCGCGGTCACCGTCTC  360
V  96.2% (277/288)  IGHV5-51*01  276  ...........G......------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  100.0% (7/7)     IGHD3-22*01  19   ------------------------.......-----------------------------------------------------------  25
J  96.4% (54/56)    IGHJ6*02     7    --------------------------------------.........A............................A.............  58

                                          
                                        S 
                    Query_3202   361  CTCA  364
J  96.4% (54/56)    IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_10570

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           288     5e-80
IGHD3-22*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAC	ATAGTACTGG	CCGAATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATAGTACTGGCCGAATCATTGACTAT	ARAHSTGRIIDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G 
                    Query_3203   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  86.8% (217/250)  IGHV4-31*01  49   ...................C................A...G.A....TGG..A...C....G.............CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  Y  I  Y  H  V  E  S  T  S  R  D  P  S  L  K  S  Q  L  T  I  S  L  D  P  S 
                    Query_3203   91   CTGGAGTGGATGGGATACATCTATCACGTTGAGAGCACCTCCCGCGACCCGTCCCTCAAGAGTCAACTTACCATTTCACTCGACCCGTCT  180
V  86.8% (217/250)  IGHV4-31*01  139  ...........T..G.........T..AG..G........A.TA.A..................T.G.......A...G.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  S  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  S  T  G  R  I 
                    Query_3203   181  AAGAGCCAGTTCTCCCTAAAACTGACCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCACATAGTACTGGCCGAATC  270
V  86.8% (217/250)  IGHV4-31*01  229  ....A............G..G....G....G.......................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-22*01  12   -------------------------------------------------------------------------......G...-------  21

                                      -------->                               
                                       I  D  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_3203   271  ATTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  310
J  97.4% (38/39)    IGHJ4*02     7    -.......C...............................  45


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_10577

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            380     1e-107
IGHD1-26*01                                                                                           12.2    35    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	100	14	0	87.7
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	269	26	0	91.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  E  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_3204   1    CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGGAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACC  90
V  91.2% (269/295)  IGHV1-8*01   1    .....G.....G........................A..................................T........C.........  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F 
                    Query_3204   91   ACTTATGATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTT  180
V  91.2% (269/295)  IGHV1-8*01   91   .G....................................A..G..............A..............C.G...T..........A.  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D 
                    Query_3204   181  GCACAGAGATTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGAC  270
V  91.2% (269/295)  IGHV1-8*01   181  .......AG...C............................C.....A.................GC............G..C..AG...  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                 
                                       T  A  I  Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_3204   271  ACGGCCATATATTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  357
V  91.2% (269/295)  IGHV1-8*01   271  ......G.G................--------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   ----------------------------------...G.....--------------------------------------------  18
J  100.0% (40/40)   IGHJ5*02     11   -----------------------------------------------........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_10576

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            315     5e-88
IGHD3-3*02                                                                                            12.2    31   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*02	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTT	GCATTT	CGATCTCCCACGAGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGCATTTCGATCTCCCACGAGGCATGGACGTC	RGCISISHEAWTS	242	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	241	114	107	6	1	93.9
CDR3-IMGT (germline)	242	246	5	5	0	0	100
Total	N/A	N/A	247	226	20	1	91.5


Alignments

                                     <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                        S  L  R  L  S  C  T  V  S  G  G  S  I  T  S  T  Y  W  W  N  W  V  R  Q  P  P  G  K  G  
                    Query_3205  1    GGTCCCTGAGACTCTCCTGCACTGTGTCTGGGGGCTCCATCACCAGTACTTACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGAC  90
V  91.5% (226/247)  IGHV4-4*01  47   ..A.....TCC...A.....G....C.....T..........G.....G.A.........G...........................G.  136
                                        T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                     ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                     L  E  W  I  G  E  I  Y  H  S  G  S  P   T  T  V  R  P  S  R  V  E  S  P  Y  Q  *  T  S  P 
                    Query_3205  91   TGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCCCCA-CTACAGTCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCA  179
V  91.5% (226/247)  IGHV4-4*01  137  ...................................A...A.....AC...........................................  226
                                     L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                     -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      R  T  S  S  P  *  S  *  G  L  *  P  P  R  T  R  P  C  T  G  V  R  G  C  I  S  I  S  H  E 
                    Query_3205  180  AGAACCAGTTCTCCCTGAAGTTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTGGTGTGCGAGGTTGCATTTCGATCTCCCACGAG  269
V  91.5% (226/247)  IGHV4-4*01  227  ....................C....C.............................T..C........-----------------------  293
                                     K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                          
D  100.0% (6/6)     IGHD3-3*02  7    ----------------------------------------------------------------------......--------------  12

                                     ---------->                                 
                                      A  W  T  S  G  A  K  G  P  R  P  S  S  P   
                    Query_3205  270  GCATGGACGTCTGGGGCCAAGGGACCACGGCCATCGTCTCCTCA  313
J  95.2% (40/42)    IGHJ6*02    21   --............................T..C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_10575

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	22	2	6	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	221	24	6	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_3206   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCCTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.0% (221/251)  IGHV4-34*01  49   .......................C..T.........T..------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_3206   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.0% (221/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_3206   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.0% (221/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_3206   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_10574

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            338     5e-95
IGHD4-17*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	GTTCTCCCCAAAA	TGATTACAGTGACTAC	GCCGAGACT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATAGTTCTCCCCAAAATGATTACAGTGACTACGCCGAGACTTACTACTATGGTATGGACGTC	AKDSSPQNDYSDYAETYYYGMDV	239	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	19	5	0	79.2
FR3-IMGT	125	238	114	113	1	0	99.1
CDR3-IMGT (germline)	239	248	10	10	0	0	100
Total	N/A	N/A	234	225	9	0	96.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  G  D  Y  A  M  Y  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  
                    Query_3207   15   GTGCAGCCTCTGGATTCACCTTTGGTGACTATGCCATGTACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTA  104
V  96.2% (225/234)  IGHV3-9*01   65   ........................A...T.........C...................................................  154
                                         A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      T  W  H  S  G  T  V  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_3207   105  CTTGGCATAGTGGTACAGTAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGC  194
V  96.2% (225/234)  IGHV3-9*01   155  G....A.........GCA........................................................................  244
                                      S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-----------------------------CDR3-IMGT-------
                                      Q  M  N  S  L  R  S  E  D  T  A  L  Y  Y  C  A  K  D  S  S  P  Q  N  D  Y  S  D  Y  A  E  
                    Query_3207   195  AAATGAACAGTCTGAGATCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATAGTTCTCCCCAAAATGATTACAGTGACTACGCCGAGA  284
V  96.2% (225/234)  IGHV3-9*01   245  .................G....................................------------------------------------  298
                                      Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                                      
D  87.5% (14/16)    IGHD4-17*01  1    -------------------------------------------------------------------...C...G........-------  16

                                      ---------------------->                                 
                                      T  Y  Y  Y  G  M  D  V  W  G  Q  G  T  A  V  I  V  S  S 
                    Query_3207   285  CTTACTACTATGGTATGGACGTCTGGGGCCAAGGGACCGCGGTCATCGTCTCCTCA  340
J  94.4% (51/54)    IGHJ6*02     9    --........C...........................A......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_134983

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           343     2e-96
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GAGGCA	ATTATG	TCACTGGCTCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGAGGCAATTATGTCACTGGCTCGCTTGACTCC	ARGGNYVTGSLDS	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_3208   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACCTTCAGTAGCTACTGGATGTACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-74*01  47   ...............................A........................C.............A...................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  H  I  N  G  D  R  R  Y  T  I  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_3208   91   TGTGGGTCTCACATATTAATGGTGACCGGCGTTATACAATCTACGCGGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (234/249)  IGHV3-74*01  137  ............G.......A....TG..A..AGC....G.................A................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  G  G  N  Y  V  T  G  
                    Query_3208   181  AGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTATATATTACTGTGCAAGAGGAGGCAATTATGTCACTGGCT  270
V  94.0% (234/249)  IGHV3-74*01  227  ..................................................G.G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  3    ---------------------------------------------------------------------------......---------  8

                                      ---------->                                  
                                      S  L  D  S  W  G  Q  E  S  L  V  T  V  S  S  
                    Query_3208   271  CGCTTGACTCCTGGGGCCAGGAAAGCCTGGTCACCGTCTCCTCAG  315
J  92.9% (39/42)    IGHJ4*02     7    ---......A...........G..C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_134980

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           396     2e-112
IGHD2-21*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	ATTTTGGTGG	ATAGAGATAGAGTTCC	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTC	REGDFGG*R*SSVWTS	283	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	69	69	68	0	1	98.6
CDR1-IMGT	70	93	24	21	3	0	87.5
FR2-IMGT	94	144	51	49	2	0	96.1
CDR2-IMGT	145	168	24	22	2	0	91.7
FR3-IMGT	169	282	114	106	8	0	93
CDR3-IMGT (germline)	283	289	7	7	0	0	100
Total	N/A	N/A	289	273	15	1	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V   S  L  E  L  R  *  R  S  L  G  P  Q  *  R  S  P  A  R  L  L  V  T  L  L  P  T  M
                    Query_3209   2    CAGCTGGTG-AGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACCGACTAT  90
V  94.5% (273/289)  IGHV1-18*01  7    .........C...................................................................C......AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                        V  S  P  G  C  D  R  P  L  D  K  G  L  S  G  W  D  G  S  A  L  T  L  V  I  Q  K  M  H  K
                    Query_3209   91   GGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGATGGATCAGCGCTTACACTGGTAATACAAAAAATGCACAA  180
V  94.5% (273/289)  IGHV1-18*01  97   .......G.....................................A.....................A......C.....CT.......G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                        K  S  R  A  E  *  P  *  P  Q  T  H  P  R  E  Q  P  T  W  S  *  G  A  *  D  L  T  T  R  P
                    Query_3209   181  AAAGTCCAGGGCAGAGTGACCATGACCACAGACACATCCACGAGAACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  270
V  94.5% (273/289)  IGHV1-18*01  187  ..GC.............C..........................C...............C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                        C  I  T  V  R  E  G  D  F  G  G  *  R  *  S  S  V  W  T  S  G  A  K  G  P  R  S  P  S  P
                    Query_3209   271  GTGTATTACTGTGCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  360
V  94.5% (273/289)  IGHV1-18*01  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD2-21*01  6    -----------------------...G......---------------------------------------------------------  15
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------.........................................  59

                                         
                                         
                    Query_3209   361  TCA  363
J  100.0% (44/44)   IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_134981

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           347     7e-98
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCTACGAGGGAAGTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATATCTACGAGGGAAGTCATCAATATAGTGGCTACATGATTAATGACTAC	GKDIYEGSHQYSGYMINDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  N  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3210   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAACAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-23*01  47   .....................C....................G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  T  S  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3210   91   AATGGGTCTCAGGTATTAGTGGTAGTGGCACTAGCACAAACTACGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (236/250)  IGHV3-23*01  137  .G..........C...............TGG.......T.........................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  I  S  L  R  A  E  D  T  A  V  Y  Y  C  G  K  D  I  Y  E  G  S  H  
                    Query_3210   181  AGAACACCTTGTATCTGCAAATGATCAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGGGAAAGATATCTACGAGGGAAGTCATC  270
V  94.4% (236/250)  IGHV3-23*01  227  .......GC...............A......................................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3210   271  AATATAGTGGCTACATGATTAATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_134987

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     2e-90
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCTCAG	AGTAGTACCAACTGTTATG	GGCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCAGAGTAGTACCAACTGTTATGGGCTTCTACTACTACGGTATGGACGTC	ARGLRVVPTVMGFYYYGMDV	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	240	117	109	5	3	93.2
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	229	16	3	92.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  G  G  S  F  S  T  Y  Y  W  T  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_3211   1    ACCCTGTCCCTCACCTGCACTGTCTATGGTGGGTCCTTCAGCACTTACTACTGGACCTGGATCCGCCAGACCCCAGGGAAGGGGCTGGAG  90
V  92.3% (229/248)  IGHV4-34*01  49   ..................G......................TGG...........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><-----------------------------------------------------FR3
                                       W  I  G  E  I  Y  V  G  G  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_3211   91   TGGATTGGGGAAATCTATGTTGGTGGAGGCACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAG  180
V  92.3% (229/248)  IGHV4-34*01  139  ...............A..CA.A.....A.....---...................................A..................  225
                                       W  I  G  E  I  N  H  S  G  S  T     N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                      -IMGT------------------------------------------------------><-------------------------CDR3
                                       N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  G  L  R  V  V  P  T  V 
                    Query_3211   181  AACCAGTTCTCCCTGAACCTGAGCTCTGTGACCGCCGCGGACACGGCTATGTACTACTGCGCGAGAGGCCTCAGAGTAGTACCAACTGTT  270
V  92.3% (229/248)  IGHV4-34*01  226  .................G..............................G....T.....T........----------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                      
D  89.5% (17/19)    IGHD2-2*01   11   --------------------------------------------------------------------------..........G...C.  26

                                      -IMGT------------------------>                                 
                                       M  G  F  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3211   271  ATGGGCTTCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
D  89.5% (17/19)    IGHD2-2*01   27   ...------------------------------------------------------------  29
J  100.0% (55/55)   IGHJ6*02     8    --------.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_134984

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           297     7e-83
IGHD3-3*01                                                                                            18.0    0.57 
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGC	TACGATTTT	GGGTCATTGTGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGCTACGATTTTGGGTCATTGTGGTGGTTCGACCCC	ARGRYDFGSLWWFDP	237	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	11	1	0	91.7
CDR1-IMGT	27	50	24	20	4	0	83.3
FR2-IMGT	51	101	51	51	0	0	100
CDR2-IMGT	102	122	24	15	6	3	62.5
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	232	213	16	3	91.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  I  F  S  N  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  M 
                    Query_3212   15   TGTGCAGCCTCCGGATTCATATTCAGTAACTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATG  104
V  91.8% (213/232)  IGHV3-21*01  64   ...........T.......CC.......G......C.....................................................T  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  S  S  S     S  Y  Y  A  D  S  V  K  G  R  F  T  I  P  R  D  N  A  K  N  S  L  V  L 
                    Query_3212   105  AGTGGAAGCAGTAGT---AGTTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCCCCAGAGACAACGCCAAGAACTCTCTGGTTCTG  191
V  91.8% (213/232)  IGHV3-21*01  154  ...A.T..T......TAC.TA....................................T......................A...TA....  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-----------------CDR3-IMGT----------------->
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  R  Y  D  F  G  S  L  W  W  F  D  P 
                    Query_3212   192  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGGTCGCTACGATTTTGGGTCATTGTGGTGGTTCGACCCC  281
V  91.8% (213/232)  IGHV3-21*01  244  ...................................G................--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (9/9)     IGHD3-3*01   5    ---------------------------------------------------------.........------------------------  13
J  97.8% (45/46)    IGHJ5*02     6    ------------------------------------------------------------------------------............  17

                                                                        
                                       W  G  Q  G  I  L  V  T  V  S  S  
                    Query_3212   282  TGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  315
J  97.8% (45/46)    IGHJ5*02     18   .............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_18740

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           318     6e-89
IGHD4-17*01                                                                                           21.8    0.041
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCC	CTACGGTGACT	GCGTGGGGT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCCTACGGTGACTGCGTGGGGTAACTGGTTCGACCCC	ARGPTVTAWGNWFDP	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  N  F  Y  W  S  W  I  R  Q  F  P  G  K  G  
                    Query_3213   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAATTTCTACTGGAGCTGGATCCGCCAGTTCCCAGGGAAGGGCC  93
V  91.1% (225/247)  IGHV4-31*03  50   .....TCC...A...................................GG..A......................CA..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  S  Y  S  G  S  A  Y  S  K  P  S  L  E  S  R  V  T  I  S  L  D  T  S  
                    Query_3213   94   TGGAGTGGATTGGGTACATCTCTTACAGTGGGAGCGCCTACTCTAAGCCGTCCCTCGAGAGTCGAGTGACCATTTCACTGGACACGTCTA  183
V  91.1% (225/247)  IGHV4-31*03  140  .....................A.............A......AC..C.........A..........T.....A...G.A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  M  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  T  V  T  A  W  
                    Query_3213   184  AGAACCAGTTCTCCCTGAAGATGAACTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGGGGCCCTACGGTGACTGCGTGGG  273
V  91.1% (225/247)  IGHV4-31*03  230  ....................C...G...........................G..............-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD4-17*01  4    ------------------------------------------------------------------------...........-------  14

                                      ---------------->                                  
                                      G  N  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_3213   274  GTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  324
J  98.0% (48/49)    IGHJ5*02     3    --.....................................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_167442

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           358     4e-101
IGHD3-10*02                                                                                           27.6    8e-04 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGAGAGAAACCAAACC	TGTTCGGGGAGTTA	GTAGCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGAGAGAAACCAAACCTGTTCGGGGAGTTAGTAGCCCTTGACTAC	ARREKPNLFGELVALDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  Y  G  M  N  W  V  R  Q  A  P  G  E  G  L  
                    Query_3214   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTACTATGGCATGAATTGGGTCCGCCAGGCTCCAGGGGAGGGGCTGG  90
V  96.4% (238/247)  IGHV3-21*01  47   ............................................AG....A.......C.....................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  G  
                    Query_3214   91   AGTGGGTCTCATCCATTAGTAGTAGCAGTAGTTACATATACTATGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  96.4% (238/247)  IGHV3-21*01  137  .........................T.................C...........................................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  R  E  K  P  N  L  F  
                    Query_3214   181  AGAACTCACTGTATCTGCAAATGAGCAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGAGAGAGAAACCAAACCTGTTCG  270
V  96.4% (238/247)  IGHV3-21*01  227  ........................A..........................................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (14/14)   IGHD3-10*02  10   ------------------------------------------------------------------------------------......  15

                                      GT-------------------->                                  
                                      G  E  L  V  A  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3214   271  GGGAGTTAGTAGCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (14/14)   IGHD3-10*02  16   ........-------------------------------------------------  23
J  100.0% (42/42)   IGHJ4*02     7    ---------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_167441

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     9e-121
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              75.7    7e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGCCTACTTTCTTAGTGGGGGTTACGCTGGTA	GTATAACAGCAGCTGG	CGAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGACATGCCTACTTTCTTAGTGGGGGTTACGCTGGTAGTATAACAGCAGCTGGCGAGATTGACTAC	GRHAYFLSGGYAGSITAAGEIDY	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	281	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  A  T  Y
                    Query_3215   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTGCCACCTA  90
V  96.6% (281/291)  IGHV5-51*01  6    ....................................C........................................G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_3215   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTAGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  96.6% (281/291)  IGHV5-51*01  96   .......................................G....................................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  P  A
                    Query_3215   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACCCCGC  270
V  96.6% (281/291)  IGHV5-51*01  186  .........................................................................A...........A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        M  Y  Y  R  G  R  H  A  Y  F  L  S  G  G  Y  A  G  S  I  T  A  A  G  E  I  D  Y  W  G  Q
                    Query_3215   271  CATGTATTACCGTGGGAGACATGCCTACTTTCTTAGTGGGGGTTACGCTGGTAGTATAACAGCAGCTGGCGAGATTGACTACTGGGGCCA  360
V  96.6% (281/291)  IGHV5-51*01  276  ..........T...C......---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  93.8% (15/16)    IGHD6-13*01  3    -----------------------------------------------------.....G..........---------------------  18
J  97.6% (41/42)    IGHJ4*02     7    --------------------------------------------------------------------------................  22

                                                                
                                        G  T  R  V  T  V  S  S  
                    Query_3215   361  GGGAACCCGGGTCACCGTCTCCTCAG  386
J  97.6% (41/42)    IGHJ4*02     23   ........T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_167440

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           285     5e-79
IGHD3-22*01                                                                                           16.1    2.6  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGCGGCCCGGAACCGAC	AGTAGTGG	CCTCCC	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCGGCCCGGAACCGACAGTAGTGGCCTCCCCAATTGGTTCGACCCC	ARGRPGTDSSGLPNWFDP	287	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	57	13	0	81.4
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	172	27	19	5	3	70.4
FR3-IMGT	173	286	114	94	20	0	82.5
CDR3-IMGT (germline)	287	292	6	6	0	0	100
Total	N/A	N/A	292	239	50	3	81.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  A  V  G  R  S  G  D  S  L  K  I  S  C  K  T  S  G  Y  K  F  S  T  Y
                    Query_3216   1    GCAGCTGGTGCAGTCTGGAGCAGCGGTGGGGAGGTCCGGAGACTCTCTGAAGATCTCTTGTAAGACCTCGGGATACAAGTTCTCCACATA  90
V  81.8% (239/292)  IGHV5-51*01  6    .......................A....AAA.A.C....G..G..............C......GGT..T.......GC..TA...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><--------CDR2-IMGT--------><-------
                                        G  I  A  W  V  R  Q  M  P  G  R  G  L  E  W  A  G  I  I  Y  P  S  D  S  K  N  V  R  Y  N
                    Query_3216   91   CGGGATCGCCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGGCGGGAATCATCTATCCTAGTGACTCAAAGAATGTCAGATATAA  180
V  81.8% (239/292)  IGHV5-51*01  96   .T......G.......................A.............AT...G............G.......---TG..AC......C.G  182
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S     D  T  R  Y  S

                                      ---------------------------------------------FR3-IMGT-------------------------------------
                                        P  S  F  R  G  H  V  T  I  S  V  E  K  A  I  T  T  A  Y  L  E  W  D  S  L  E  T  S  D  S
                    Query_3216   181  TCCGTCCTTCAGAGGCCACGTCACCATTTCCGTCGAGAAGGCCATCACCACCGCCTACCTGGAGTGGGACAGCCTGGAGACCTCGGACAG  270
V  81.8% (239/292)  IGHV5-51*01  183  C.........CA......G........C..A.C...C...T......G.............C.....AG.......A..G.........C  272
                                        P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T

                                      ---------------><----------------------CDR3-IMGT--------------------->                    
                                        G  I  Y  Y  C  A  R  G  R  P  G  T  D  S  S  G  L  P  N  W  F  D  P  W  G  Q  G  T  L  V
                    Query_3216   271  CGGCATCTATTACTGTGCGAGAGGGCGGCCCGGAACCGACAGTAGTGGCCTCCCCAATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  360
V  81.8% (239/292)  IGHV5-51*01  273  ..C...G...............--------------------------------------------------------------------  294
                                        A  M  Y  Y  C  A  R                                                                     
D  100.0% (8/8)     IGHD3-22*01  14   ----------------------------------------........------------------------------------------  21
J  94.0% (47/50)    IGHJ5*02     2    ------------------------------------------------------...C................................  37

                                                    
                                        T  V  A  P  
                    Query_3216   361  CACCGTCGCCCCAG  374
J  94.0% (47/50)    IGHJ5*02     38   .......T..T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_18744

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            439     2e-125
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTCCGGTATGGACGTC	ARDRLASYDSTGYRPYFYSGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	286	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_3217   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  98.3% (286/291)  IGHV1-2*04   6    ..................G.............AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_3217   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.3% (286/291)  IGHV1-2*04   96   ..........................................................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  A  D  T  A
                    Query_3217   181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGCCGACACGGC  270
V  98.3% (286/291)  IGHV1-2*04   186  ................................................................................A.........  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  S  G  M  D  V  W  G  Q
                    Query_3217   271  CGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTCCGGTATGGACGTCTGGGGCCA  360
V  98.3% (286/291)  IGHV1-2*04   276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  96.5% (55/57)    IGHJ6*02     6    ----------------------------------------------------------....A.....A.....................  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_3217   361  AGGGACCACGGTCACCGTCTCCTCA  385
J  96.5% (55/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_18745

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  P  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_3218   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCCCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  97.6% (282/289)  IGHV5-51*01  6    .......................................................T.....................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_3218   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  97.6% (282/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_3218   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*01  186  .............................C...........................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3218   271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  97.6% (282/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_3218   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_18746

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            391     6e-111
IGHD3-10*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	TGCC	TGGTTCGGGGA	CTT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGTGCCTGGTTCGGGGACTTACTCCTTTGATTAC	AGVPGSGTYSFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  G  S  Y
                    Query_3219   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCGGCAGCTA  90
V  93.1% (270/290)  IGHV1-8*02   6    ..................G...............................................................AC......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  D  Y  A  Q
                    Query_3219   91   TGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATGAATCCTAACAGTGGGAACACAGACTATGCACA  180
V  93.1% (270/290)  IGHV1-8*02   96   .........................A..................................C...........T.......G.........  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  Y  M  E  L  S  S  L  G  S  A  D  T  A
                    Query_3219   181  GAAGTTCCGGGGCAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCTACATGGAGCTGAGTAGTCTGGGATCTGCCGACACGGC  270
V  93.1% (270/290)  IGHV1-8*02   186  ........A.......................A...C..C.T........................C..C...A......AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  C  C  A  G  V  P  G  S  G  T  Y  S  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_3219   271  CGTCTATTGCTGTGCGGGAGTGCCTGGTTCGGGGACTTACTCCTTTGATTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  356
V  93.1% (270/290)  IGHV1-8*02   276  ...G....A.......A...------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (11/11)   IGHD3-10*01  10   ------------------------...........---------------------------------------------------  20
J  93.8% (45/48)    IGHJ4*02     1    --------------------------------------...A......C........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_18747

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-16*02                                                                                           12.2    32   
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGT	TCGTTA	CCCAATCTTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTTCGTTACCCAATCTTGGCTACTACTACGGTATGGACGTC	ARDRSLPNLGYYYGMDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  M  G  L  E 
                    Query_3220   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGATGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...............................G.........T...........................C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  Y  S  G  T  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_3220   91   TGGATTGGGCATATCTATTACAGTGGGACCACCAGTTACAATCCTTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAT  180
V  93.5% (229/245)  IGHV4-59*01  139  .........T..................G.....AC.....C..C...........................G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  S  L  P  N  L  G  Y 
                    Query_3220   181  CAGTTCTCCCTGAAGCTGAATTCCGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATCGTTCGTTACCCAATCTTGGCTAC  270
V  93.5% (229/245)  IGHV4-59*01  229  ...................GC..T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*02  28   ---------------------------------------------------------------------......---------------  33
J  96.4% (53/55)    IGHJ6*02     8    --------------------------------------------------------------------------------------....  11

                                      ----------------->                                 
                                       Y  Y  G  M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_3220   271  TACTACGGTATGGACGTCTGGGGCCAAGGGGCCACCGTCACCGTCTCCTCA  321
J  96.4% (53/55)    IGHJ6*02     12   ..............................A....G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_18749

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           392     2e-111
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGAGCG	GCACTGGCTGGTA	TTTGGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGAGCGGCACTGGCTGGTATTTGGCCTAC	ARGSGTGWYLAY	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	71	4	0	94.7
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	296	7	6	1	0	85.7
Total	N/A	N/A	295	273	22	0	92.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  M  F  T 
                    Query_3221   2    CAGATGCAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCCAGGCTTCTGGTTACATGTTTACC  91
V  92.5% (273/295)  IGHV1-18*04  1    ...G.T...................C........................................A...............CC......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  G  Y  N  G  N  T  K  Y 
                    Query_3221   92   ACTTACGGCATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGCTGGGATGGATCAGCGGCTACAATGGTAACACAAAGTAT  181
V  92.5% (273/295)  IGHV1-18*04  91   .GC.....T..........................................A...............CT.................C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  L  Q  D  R  V  T  L  T  I  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_3221   182  GCACAGAACCTCCAGGACAGAGTCACCCTGACCATAGACACATCTACGAGCACTGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGAC  271
V  92.5% (273/295)  IGHV1-18*04  181  ........G.......G..........A......C.........C........A.....C..............................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  V  Y  Y  C  A  R  G  S  G  T  G  W  Y  L  A  Y  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_3221   272  ACGGCCGTCTATTACTGTGCGCGAGGGAGCGGCACTGGCTGGTATTTGGCCTACTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  359
V  92.5% (273/295)  IGHV1-18*04  271  ........G............A...---------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                 
D  92.3% (12/13)    IGHD6-19*01  8    -------------------------------...G.........--------------------------------------------  20
J  97.4% (37/38)    IGHJ4*02     11   --------------------------------------------------......................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_167449

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            380     1e-107
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              110     2e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGG	GTATAGCAGCTCG	ATCGTTA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTATAGCAGCTCGATCGTTATACTACTACTACGGTATGGACGTC	ARGGIAARSLYYYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	246	3	0	98.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  R  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3222  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTAGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (246/249)  IGHV3-7*01  47   .............................G............................................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  N  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3222  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACAATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.8% (246/249)  IGHV3-7*01  137  .........................................T................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  G  I  A  A  R  S  
                    Query_3222  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGGGTATAGCAGCTCGATCGT  270
V  98.8% (246/249)  IGHV3-7*01  227  ....................................C................................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD6-6*01  3    ------------------------------------------------------------------------.............-----  15

                                     IMGT--------------------->                                 
                                     L  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3222  271  TATACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  100.0% (57/57)   IGHJ6*02    6    --.........................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_167448

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*04                                                                                           382     3e-108
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*04	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTTCG	GCAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTCGGCAGCAGCTGACTGACTAC	ARDFRQQLTDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3223   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-21*04  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  G  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3223   91   AGTGGGTCTCATCCATTAGTAGTAGTGGTACTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.8% (247/250)  IGHV3-21*04  137  ..........................A...G...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  R  Q  Q  L  T  
                    Query_3223   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCCGTGTATTACTGTGCGAGAGATTTTCGGCAGCAGCTGACTG  270
V  98.8% (247/250)  IGHV3-21*04  227  ........................................G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD6-13*01  8    ----------------------------------------------------------------------------..........----  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3223   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (41/41)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_104892

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            304     9e-85
IGHD2-21*01                                                                                           12.2    31   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTGGTAAAG	TATTCC	TTGGATC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGGTAAAGTATTCCTTGGATCACTTTGTCCAC	ARLVKYSLDHFVH	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	100	14	0	87.7
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	220	26	0	89.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  N  D  H  W  W  R  W  V  R  Q  P  P  G  K  G  L 
                    Query_3224   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATTACCAATGATCACTGGTGGCGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  89.4% (220/246)  IGHV4-4*02   49   ..................GC...........G......C.G..G.AG.A........A................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  R  S  G  S  T  T  Y  N  P  S  L  Q  S  R  V  A  F  S  V  D  K  S  T 
                    Query_3224   91   GAGTGGATTGGAGAAATCTATCGTAGTGGGAGCACCACTTACAACCCGTCCCTTCAGAGTCGAGTCGCCTTCTCAGTAGACAAGTCCACG  180
V  89.4% (220/246)  IGHV4-4*02   139  ...........G..........A..............AC..............CA...........A..A.A................A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  F  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  V  K  Y  S  L  D  H 
                    Query_3224   181  AACCAGTTCTCCCTGAGTCTGAGATCTGTGACCGCCGCCGATACGGCCGTATATTACTGTGCGAGATTGGTAAAGTATTCCTTGGATCAC  270
V  89.4% (220/246)  IGHV4-4*02   229  ................AG.....C..............G..C........G...............------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-21*01  23   ---------------------------------------------------------------------------......---------  28
J  93.3% (42/45)    IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                                  
                                       F  V  H  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_3224   271  TTTGTCCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  313
J  93.3% (42/45)    IGHJ4*02     6    ....A.T................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_274907

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_3225   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.5% (278/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_3225   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  R  A  S  D  T  A
                    Query_3225   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAGGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  .......C.....................................C...........G......A.........A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_3225   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_3225   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_274905

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  H
                    Query_3226   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATCA  90
V  92.4% (268/290)  IGHV5-51*01  6    ....................C........A.....................G.........A......C.........C.......GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  P
                    Query_3226   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCCC  180
V  92.4% (268/290)  IGHV5-51*01  96   ...................................................G.......A.....G.......G....C.....C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  A
                    Query_3226   181  GTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCGC  270
V  92.4% (268/290)  IGHV5-51*01  186  ...............G........C...................................G.......G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_3226   271  CTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  350
V  92.4% (268/290)  IGHV5-51*01  276  .A.......C.....G....------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    -----------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_274904

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           307     1e-85
IGHD5-18*01                                                                                           18.0    0.60 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	220	24	0	90.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_3227   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCACCAGGGAAGGGACTGGAGT  93
V  90.2% (220/244)  IGHV4-59*01  50   .....TCC...A..................G........G.AG..A......................C.C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  I  I  S  V  D  T  S  K  S  
                    Query_3227   94   GGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCATCATTTCAGTAGACACGTCCAAGAGCC  183
V  90.2% (220/244)  IGHV4-59*01  140  .......G......T..........G.GC.............................A.T..C...A...................A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F  
                    Query_3227   184  AGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTTG  273
V  90.2% (220/244)  IGHV4-59*01  230  ............A.........................A.......G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------------------------.......C.G..A..  15

                                      ------------------->                                  
                                      G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_3227   274  GTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  327
D  83.3% (15/18)    IGHD5-18*01  16   ...---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    -----...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_274903

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           344     6e-97
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGACGTGCGCACTCAA	GGGGGA	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGACGTGCGCACTCAAGGGGGATTGACTAC	ARDLGRAHSRGIDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  N  N  H  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3228   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGCTTCAATAACCATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-33*01  47   ....................................C.....G..G.T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  S  R  R  Y  Y  S  D  S  V  R  G  Q  F  T  I  S  R  D  N  S  
                    Query_3228   91   AGTGGGTGGCAATTATTTGGTATGATGGAAGTCGTAGATACTATTCAGACTCCGTGAGGGGCCAATTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-33*01  137  ...........G....A...............AA..A.......G............A.....G..........................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  S  A  E  D  T  A  I  Y  Y  C  A  R  D  L  G  R  A  H  S  
                    Query_3228   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGCGCCGAGGACACGGCTATATATTACTGTGCGAGAGATCTTGGACGTGCGCACTCAA  270
V  94.0% (235/250)  IGHV3-33*01  227  ..................................A...............G.G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ------------->                                 
                                      R  G  I  D  Y  W  G  L  G  T  L  V  T  V  S  S 
                    Query_3228   271  GGGGGATTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCA  317
D  100.0% (6/6)     IGHD3-16*01  18   ......-----------------------------------------  23
J  97.6% (40/41)    IGHJ4*02     7    ------...............A.........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_274902

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           324     8e-91
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ3*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCAAG	CGTTTGGGGGAGTTAT	TTCGT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAAGCGTTTGGGGGAGTTATTTCGTTGCTTTTGATTTC	AASVWGSYFVAFDF	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	248	3	3	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  T  W  I  R  Q  H  P  G  K  G  
                    Query_3229   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGGAC  93
V  92.2% (226/245)  IGHV4-61*08  50   .....TCC...A.......................G........................G.........G....C..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  H  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  I  N  T  S  
                    Query_3229   94   TGGAGTGGATTGGGTATATCTATTACAGTGGACACACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAAACACGTCCA  183
V  92.2% (226/245)  IGHV4-61*08  140  ...............................GAG....A......................................G..G.........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  K  Q  F  S  L  K  L  T  S  V  T  T  A  D  T  A  I  Y  Y  C  A  A  S  V  W  G  S  Y  F  
                    Query_3229   184  AGAAGCAGTTCTCCCTGAAGCTGACCTCTGTGACCACTGCGGACACGGCCATATATTACTGTGCGGCAAGCGTTTGGGGGAGTTATTTCG  273
V  92.2% (226/245)  IGHV4-61*08  230  ....C...................G..........G..............G.G............-------------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (16/16)   IGHD3-16*01  13   ----------------------------------------------------------------------................----  28

                                      ------------->                                  
                                      V  A  F  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_3229   274  TTGCTTTTGATTTCTGGGGCCAAGGGACACTGGTCGCCGTCTCCTCAG  321
J  91.5% (43/47)    IGHJ3*01     4    -..........G.................A.....A.......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_274901

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           279     3e-77
IGHD1-20*01                                                                                           12.2    34   
IGHJ2*01                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-20*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGGCGCCCCAAGGGCCCCCTGATAATA	ATAACT	TCCGGCGAAAGAAA	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCGCCCCAAGGGCCCCCTGATAATAATAACTTCCGGCGAAAGAAATGGTACTTCGATCTC	ARAPQGPPDNNNFRRKKWYFDL	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	212	34	0	86.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  E  Y  S  L  T  T  Y  A  M  A  W  V  R  Q  A  P  G  K  G  L  
                    Query_3230   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGAATACTCTTTGACCACCTACGCCATGGCCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  86.2% (212/246)  IGHV3-23*01  47   .....................C........G..T.A.C..T.G..G...T......AG.........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  V  S  G  L  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3230   91   AATGGGTCTCGGGCGTTAGTGGCCTTGGTGGCAGCACATATTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  86.2% (212/246)  IGHV3-23*01  137  .G........A.CTA.......TAG......T........C..C..............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      R  N  T  L  Y  L  D  M  N  S  L  R  G  D  D  T  A  I  Y  Y  C  A  R  A  P  Q  G  P  P  D  
                    Query_3230   181  GGAACACCCTCTATTTGGACATGAACAGCCTAAGAGGCGACGACACGGCCATTTATTACTGTGCGAGGGCGCCCCAAGGGCCCCCTGATA  270
V  86.2% (212/246)  IGHV3-23*01  227  A......G..G...C..C.A...........G....C...G.........G.A.............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      -CDR3-IMGT--------------------------->                                
                                      N  N  N  F  R  R  K  K  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S
                    Query_3230   271  ATAATAACTTCCGGCGAAAGAAATGGTACTTCGATCTCTGGGGCCGAGGCACCCTGGTCACTGTCTCCTC  340
D  100.0% (6/6)     IGHD1-20*01  4    ---......-------------------------------------------------------------  9
J  97.9% (46/47)    IGHJ2*01     5    -----------------------.......................T.......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_274900

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_3231   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_3231   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_3231   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_3231   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_177464

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           321     7e-90
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTGCCTTCGGTCCGA	ATAGCAGT	TGACAGGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGCCTTCGGTCCGAATAGCAGTTGACAGGGGCTACTCCGGCATGGACGTC	ARLPSVRIAVDRGYSGMDV	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  L  N  S  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3232   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGACTCCTTGAATAGTTACTTCTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.2% (224/243)  IGHV4-59*01  49   .............................T.G....A.C.G........A.....G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  D  S  E  T  T  K  Y  N  P  S  L  R  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_3232   91   TGGATTGGCTATATCTATGACAGTGAGACCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  92.2% (224/243)  IGHV4-59*01  139  ........G.........T......G..G......C................A....................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  T  V  T  S  V  T  P  A  D  T  A  V  Y  F  C  A  R  L  P  S  V  R  I  A  V  D 
                    Query_3232   181  CAGTTCTCCCTGACGGTGACCTCTGTGACCCCTGCGGACACGGCCGTGTATTTCTGTGCGAGATTGCCTTCGGTCCGAATAGCAGTTGAC  270
V  92.2% (224/243)  IGHV4-59*01  229  .............A.C...G..........G.....................A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  5    ------------------------------------------------------------------------------........----  12

                                      ----------------------->                                 
                                       R  G  Y  S  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3232   271  AGGGGCTACTCCGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  327
J  96.2% (50/52)    IGHJ6*02     11   -----.....A...T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_298746

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           350     8e-99
IGHD3-16*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAATC	TTGGGGGAG	CCGACCAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAATCTTGGGGGAGCCGACCAGATTGACTAC	ARVNLGGADQIDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  H  Y  W  S  W  M  R  Q  P  P  G  K  G 
                    Query_3233   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGGTAGTCACTACTGGAGCTGGATGCGGCAGCCCCCAGGGAAGGGA  90
V  94.8% (237/250)  IGHV4-61*01  49   .........................................C.........T................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  G  T  N  Y  E  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_3233   91   CTGGAGTGGATTGGGAATATCTATTATAGTGGGGGCACCAACTACGAACCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCC  180
V  94.8% (237/250)  IGHV4-61*01  139  ...............T..........C......A...........A.C..............................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  N  S  L  T  A  A  D  T  A  V  Y  F  C  A  R  V  N  L  G  G  A  D 
                    Query_3233   181  AAGAACCAGTTCTCCCTGAAACTGAACTCTTTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGTTAATCTTGGGGGAGCCGAC  270
V  94.8% (237/250)  IGHV4-61*01  229  ....................G....G....G...........................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  16   ----------------------------------------------------------------------------.........-----  24

                                      ----------->                                  
                                       Q  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3233   271  CAGATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (42/42)   IGHJ4*02     7    ----..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_177466

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACGCGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACGCGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_3234   1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  87.0% (214/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_3234   91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCACCATCTCAGTAGACAAGTCCAAG  180
V  87.0% (214/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A................A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_3234   181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACGCGTGGCACTCGG  270
V  87.0% (214/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_3234   271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_177467

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            369     2e-104
IGHD6-13*01                                                                                           18.0    0.59  
IGHJ6*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TTCCAGTT	TAGCAGCAG	AGTCGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATTCCAGTTTAGCAGCAGAGTCGGACTACGGTATGGACGTC	ARDSSLAAESDYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3235   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTACTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  97.2% (243/250)  IGHV3-7*03   47   .................................................T.......G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  S  Y  V  A  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3235   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATCCTATGTGGCGTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (243/250)  IGHV3-7*03   137  .......................................A........AC........................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  S  L  A  A  E  
                    Query_3235   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGGGATTCCAGTTTAGCAGCAGAGT  270
V  97.2% (243/250)  IGHV3-7*03   227  ...................................................................A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-13*01  6    ------------------------------------------------------------------------------.........---  14

                                      T------------------>                                 
                                      S  D  Y  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_3235   271  CGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACAGTCATCGTCTCCTCA  323
J  96.0% (48/50)    IGHJ6*02     13   ---..................................G....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_177460

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           332     4e-93
IGHD2-21*02                                                                                           12.2    33   
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGGAAATCCAGGATCGAACCCTGA	GACTGC	AAGTTTTTAGTTGGCTAAAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGGAAATCCAGGATCGAACCCTGAGACTGCAAGTTTTTAGTTGGCTAAAGTAC	AREGEIQDRTLRLQVFSWLKY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3236   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-33*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  G  I  A  R  Y  E  A  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3236   91   AGTGGGTTGGAATTGCACGGTATGAAGCAAGTAATACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATATCCAGAGACAATTCCA  180
V  92.4% (231/250)  IGHV3-33*01  137  .......G.C.G..AT.T.......T.G........A......T.............................C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      R  K  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  M  Y  Y  C  A  R  E  G  E  I  Q  D  R  
                    Query_3236   181  GGAAGACCCTATATCTGCAAATGAACAGCCTCAGAGCCGATGACACGGCTATGTATTACTGTGCGAGAGAGGGGGAAATCCAGGATCGAA  270
V  92.4% (231/250)  IGHV3-33*01  227  A...C..G..G....................G........G.........G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      DR3-IMGT-------------------------->                                  
                                      T  L  R  L  Q  V  F  S  W  L  K  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3236   271  CCCTGAGACTGCAAGTTTTTAGTTGGCTAAAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  100.0% (6/6)     IGHD2-21*02  17   ------......---------------------------------------------------------  22
J  100.0% (37/37)   IGHJ4*02     12   --------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_177461

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           297     7e-83
IGHD3-3*01                                                                                            14.1    8.4  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTACA	ATTACGA	CCCTAGCGCTTTTCAACTCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTACAATTACGACCCTAGCGCTTTTCAACTCTTCTTTGACTAC	ARYNYDPSAFQLFFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	216	26	0	89.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  D  Y  Y  W  S  W  V  R  Q  S  P  G  K  G  L  E 
                    Query_3237   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGTGACTACTATTGGAGTTGGGTCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  89.3% (216/242)  IGHV4-59*08  49   ...................C......................AGT.....C.....C...A........C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  F  Y  S  G  S  A  T  Y  N  P  S  L  G  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3237   91   TGGATTGGCTATGTCTTTTACAGTGGGAGCGCCACCTACAACCCCTCCCTCGGGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  89.3% (216/242)  IGHV4-59*08  139  ........G...A...A.............A...A................AA.....................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       V  Y  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  N  Y  D  P  S  A  F  Q 
                    Query_3237   181  GTCTACTCCCTGAGACTGACTTCCGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGGTACAATTACGACCCTAGCGCTTTTCAA  270
V  89.3% (216/242)  IGHV4-59*08  229  CAG.T........AG....GC..T.......................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD3-3*01   3    -------------------------------------------------------------------.......----------------  9

                                      -------------->                                  
                                       L  F  F  D  Y  W  G  Q  G  K  V  V  T  V  S  S  
                    Query_3237   271  CTCTTCTTTGACTACTGGGGCCAGGGAAAGGTGGTCACCGTCTCCTCAG  319
J  93.2% (41/44)    IGHJ4*02     5    -----.......................CCC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_177462

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           282     4e-78
IGHD3-16*01                                                                                           18.0    0.60 
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACAACG	TATGCTTAT	GTCAGTGCTTGGGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAACGTATGCTTATGTCAGTGCTTGGGGATGATGCTTTTGATGTC	ARRQRMLMSVLGDDAFDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  V  T  T  T  R  Y  S  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_3238   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCGTCACCACTACTAGATACTCCTGGGGTTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  86.0% (215/250)  IGHV4-39*01  49   ...............................G....A...G..G..G...T....A......C..........................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Q  M  F  Y  G  G  S  T  Y  Q  N  P  S  L  N  S  R  V  T  V  S  V  D  P  S 
                    Query_3238   91   CTGGAATGGATTGGGCAGATGTTCTATGGTGGGAGCACGTACCAGAACCCGTCGCTGAATAGTCGAGTCACCGTGTCCGTTGACCCGTCC  180
V  86.0% (215/250)  IGHV4-39*01  139  .....G.........AGT..C.AT...A..........C...T.C........C..C..G............A.A.....A...A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  S  Q  F  F  L  N  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  R  Q  R  M  L  M  S 
                    Query_3238   181  AAGAGTCAGTTCTTCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCTGTATATTATTGTGCGAGACGACAACGTATGCTTATGTCA  270
V  86.0% (215/250)  IGHV4-39*01  229  ....AC.......C......G....G...................A.......G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  26   -----------------------------------------------------------------------------.........----  34

                                      -IMGT--------------------->                                  
                                       V  L  G  D  D  A  F  D  V  W  G  Q  G  T  G  V  T  V  S  S  
                    Query_3238   271  GTGCTTGGGGATGATGCTTTTGATGTCTGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  331
J  96.0% (48/50)    IGHJ3*01     1    -----------...............................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_274908

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           358     4e-101
IGHD3-10*01                                                                                           14.1    9.4   
IGHJ2*01                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGCC	ACTATGG	GGATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGCCACTATGGGGATGCCTACTGGTCCCTCGATATC	ARSHYGDAYWSLDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	96	18	0	84.2
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	258	29	0	89.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T  S  Y 
                    Query_3239   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTATCCTGCAAGGCCTCTGGTTACATCTTCACCAGTTAT  91
V  89.9% (258/287)  IGHV1-18*01  7    .....................................................C...........T..........C...T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  F  E  R  M  G  W  I  S  P  Y  N  G  N  T  A  Y  A  E 
                    Query_3239   92   GGAATCACTTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGCGGATGGGATGGATCAGCCCTTACAATGGTAACACAGCCTACGCAGAG  181
V  89.9% (258/287)  IGHV1-18*01  97   ..T....GC...........................C.....T.................G.................AA...T...C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  F  T  V  A  T  E  T  S  T  N  T  A  F  M  E  L  R  S  L  K  A  D  D  T  A 
                    Query_3239   182  AAGTTCCAGGGCAGATTCACCGTGGCCACAGAGACTTCCACGAACACAGCCTTCATGGAGCTGCGGAGTCTGAAAGCTGACGACACGGCC  271
V  89.9% (258/287)  IGHV1-18*01  187  ...C...........G.....A..A.......C..A.......G........A..........A....C....G.T..............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  F  Y  C  A  R  S  H  Y  G  D  A  Y  W  S  L  D  I  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3239   272  GTCTTTTACTGTGCGAGGAGCCACTATGGGGATGCCTACTGGTCCCTCGATATCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  359
V  89.9% (258/287)  IGHV1-18*01  277  ..G.A............-----------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                          
D  100.0% (7/7)     IGHD3-10*01  6    ----------------------.......-----------------------------------------------------------  12
J  94.3% (50/53)    IGHJ2*01     1    -----------------------------------........A.T.....C....................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_133459

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            310     1e-86
IGHD3-9*01                                                                                            25.7    0.003
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGACGCG	GTATTACTATATTTTG	TAGAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGACGCGGTATTACTATATTTTGTAGACGACTAC	AREDAVLLYFVDDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	24	18	3	3	75
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	250	226	21	3	90.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  Y  S  F  S  S  H  W  M  S  W  V  R  L  A  P  G  K  G  L  
                    Query_3240  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATATTCCTTCAGTAGTCATTGGATGAGCTGGGTCCGCCTGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-7*01  47   .................................TCA....T.....CT.....................A....................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  S  I  K  Q  D  G  S     K  F  Y  M  D  S  V  T  G  R  F  T  I  S  R  D  N  A  
                    Query_3240  91   AGTGGGTGGCCAGCATAAAACAGGATGGCAGT---AAATTCTACATGGACTCTGTGACGGGCCGATTCACCATCTCCCGAGACAACGCCA  177
V  90.4% (226/250)  IGHV3-7*01  137  ............A......G..A.....A...GAG....A...TG............A...................A............  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                     K  N  S  L  D  L  Q  M  N  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  E  D  A  V  L  L  Y  
                    Query_3240  178  AGAACTCACTGGATCTGCAAATGAACAACTTGAGAGTCGAGGACACGGCTGTCTATTACTGTGCGAGAGAGGACGCGGTATTACTATATT  267
V  90.4% (226/250)  IGHV3-7*01  227  ...........T...............G.C......C...............G.................--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.8% (15/16)    IGHD3-9*01  1    -----------------------------------------------------------------------------.......G.....  13

                                     ------------->                                  
                                     F  V  D  D  Y  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_3240  268  TTGTAGACGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  315
D  93.8% (15/16)    IGHD3-9*01  14   ...---------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    --------....................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_133458

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           343     2e-96
IGHD2-21*01                                                                                           10.3    124  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTC	GTGAT	CGGTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCGTGATCGGTGACTACTTTGACCAA	ARHVVIGDYFDQ	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  D  A  S  I  S  S  S  R  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_3241   1    ACCCTGTCCCTCACCTGCACTGTCTCTGATGCCTCCATCAGCAGTAGTAGATACTATTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.6% (235/251)  IGHV4-39*01  49   ............................G..G..................T.....C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  H  I  G  S  T  F  Y  K  Q  S  L  K  T  R  V  T  I  S  I  D  S  S 
                    Query_3241   91   CTGGAGTGGATTGGGAGTATTTATCATATTGGGAGCACCTTCTACAAACAGTCCCTCAAGACTCGAGTCACCATATCCATAGACTCGTCC  180
V  93.6% (235/251)  IGHV4-39*01  139  ....................C...T...G...........A......C.C...........G................G.....A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  H  V  V  I  G  D  Y 
                    Query_3241   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTATATATTACTGTGCGAGACATGTCGTGATCGGTGACTAC  270
V  93.6% (235/251)  IGHV4-39*01  229  ...................A...............................G.G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD2-21*01  15   ---------------------------------------------------------------------------.....----------  19
J  95.8% (46/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3241   271  TTTGACCAATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  95.8% (46/48)    IGHJ4*02     6    ......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_133455

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           311     4e-87
IGHD1-26*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCG	TAGAGGGAGC	AACAGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCGTAGAGGGAGCAACAGTTTTTGACTAC	AKVVEGATVFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	224	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3242   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGGCAGTTATGCCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.0% (224/249)  IGHV3-23*01  47   .........................................A....C..........GC..........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  S  N  K  G  R  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3242   91   AGTGGGTGGCGGGTATCAGTAACAAAGGTCGGAACACATATTACGCAGACTCCGTGAAGGGCCGGTTCACCATTTCCAGAGACAATTCCG  180
V  90.0% (224/249)  IGHV3-23*01  137  .......CT.A.C...T...GGT.GT...G.T.G......C................................C...............A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      E  K  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  V  V  E  G  A  T  V  
                    Query_3242   181  AGAAGACGCTATATCTCCAAATGAACAGTCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTCGTAGAGGGAGCAACAGTTT  270
V  90.0% (224/249)  IGHV3-23*01  227  ....C.....G.....G...........C........................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (9/10)     IGHD1-26*01  5    ------------------------------------------------------------------------...T......--------  14
J  97.7% (42/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_3242   271  TTGACTACTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  312
J  97.7% (42/43)    IGHJ4*02     7    .............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_133457

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            333     1e-93
IGHD1-26*01                                                                                           18.0    0.60 
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAACAGTTTGTTGGCTCCTG	AGTGGGAGC	CTGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACAGTTTGTTGGCTCCTGAGTGGGAGCCTGATGATGCTTTTGATATC	ARVNSLLAPEWEPDDAFDI	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  R  S  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_3243   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGCAGAAGCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.1% (230/247)  IGHV4-4*02   49   ...............................G............T..T.A........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  N  T  N  Y  N  P  S  L  K  S  R  L  I  I  S  V  D  K  S  K 
                    Query_3243   91   GAGTGGATTGGGGAGATCTATCATGGTGGGAATACCAACTACAACCCGTCCCTCAAGAGTCGACTTATTATATCAGTAGACAAGTCCAAG  180
V  93.1% (230/247)  IGHV4-4*02   139  ..............A.........A......GC..............................G.C.CC.....................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       N  Q  F  S  L  Q  L  R  S  E  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  S  L  L  A  P  E 
                    Query_3243   181  AACCAATTCTCCCTGCAGCTGAGGTCTGAGACCGCCGCGGACACGGCCGTTTATTACTGTGCGAGAGTTAACAGTTTGTTGGCTCCTGAG  270
V  93.1% (230/247)  IGHV4-4*02   229  .....G.........A.......C....T.....................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD1-26*01  6    ----------------------------------------------------------------------------------------..  7

                                      MGT----------------------->                                
                                       W  E  P  D  D  A  F  D  I  W  G  Q  G  T  L  A  I  V  S  S
                    Query_3243   271  TGGGAGCCTGATGATGCTTTTGATATCTGGGGCCAAGGGACATTGGCCATCGTCTCTTC  329
D  100.0% (9/9)     IGHD1-26*01  8    .......----------------------------------------------------  14
J  93.8% (45/48)    IGHJ3*02     1    -----------...............................A...T..C.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_133456

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           300     8e-84
IGHD1-26*01                                                                                           10.3    122  
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	T	TGGGA	TCGCGGGACCCACGAGTTG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTGGGATCGCGGGACCCACGAGTTGGCTTTTGATATC	ARHWDRGTHELAFDI	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	21	9	0	70
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  D  G  S  V  T  T  T  D  S  Y  W  G  W  I  R  Q  P  S  G  K  G  
                    Query_3244   4    CCCTGAGACTCTCCTGTTCTGTCTCTGATGGCTCCGTCACCACGACTGATTCCTACTGGGGCTGGATCCGCCAGCCCTCAGGGAAGGGGC  93
V  88.4% (221/250)  IGHV4-39*01  50   .....TCC...A....CA.........G.......A...G..GT.G.AG..A.........................C............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  F  Y  S  G  I  T  H  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  
                    Query_3244   94   TGGAGTGGATTGGGAGTATTTTCTATAGTGGGATCACCCACTACAATCCGTCCCTCAAGAGTCGAGTCACCGTATCCGTAGACACGTCCA  183
V  88.4% (221/250)  IGHV4-39*01  140  ...................C.AT..........G....T.......C........................A..................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  H  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  W  D  R  G  T  H  
                    Query_3244   184  GGCACCAGTTCTCCCTGAACCTGAGATCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGACATTGGGATCGCGGGACCCACG  273
V  88.4% (221/250)  IGHV4-39*01  230  A.A................G.....C..............A...........G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  8    -----------------------------------------------------------------------.....--------------  12

                                      ---------------->                                  
                                      E  L  A  F  D  I  W  G  R  G  T  M  V  T  V  S  S  
                    Query_3244   274  AGTTGGCTTTTGATATCTGGGGCCGAGGGACAATGGTCACCGTCTCTTCAG  324
J  97.8% (45/46)    IGHJ3*02     5    -----...................A..........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_101959

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            341     5e-96
IGHD5-12*01                                                                                           18.0    0.58 
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	ACGGGTAGAGA	TGGCTACAATTA	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAACGGGTAGAGATGGCTACAATTATGATGCTTTGGATATG	AGTGRDGYNYDALDM	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  S  D  Y  W  M  T  W  V  R  Q  A  P  G  K  G  P  
                    Query_3245   1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCACCTTCAGTGACTATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  94.0% (233/248)  IGHV3-7*03   47   .......................G................T...AG...........G.............................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  H  D  G  R  E  K  N  Y  V  D  A  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3245   91   AGTGGGTGGCCAACATTAAACATGATGGACGTGAGAAAAACTATGTCGACGCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (233/248)  IGHV3-7*03   137  ................A..G..A......A........T.......G...T.......................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  G  T  G  R  D  G  Y  N  
                    Query_3245   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTGTATTACTGTGCGGGAACGGGTAGAGATGGCTACAATT  270
V  94.0% (233/248)  IGHV3-7*03   227  ....................................C............................A..----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD5-12*01  11   -------------------------------------------------------------------------------.......G...  21

                                      ---------------->                                  
                                      Y  D  A  L  D  M  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3245   271  ATGATGCTTTGGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCCTCAG  321
D  91.7% (11/12)    IGHD5-12*01  22   .--------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    -.........T.....C.............................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_101958

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         350     8e-99
IGHD2-15*01                                                                                           12.2    32   
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTCTCGA	CTACTC	TTCCTGGGGTCTACAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCTCGACTACTCTTCCTGGGGTCTACATTATGGACGTC	ARVSTTLPGVYIMDV	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	235	11	0	95.5


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  V  V  S  G  Y  S  I  S  R  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_3246     1    ACCCTGTCCCTCACCTGCGTTGTCTCTGGTTACTCCATCAGCAGGGGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGACTG  90
V  95.5% (235/246)  IGHV4-38-2*01  49   ...................C........................T.......................G.................G...  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  T  I  S  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_3246     91   GAGTGGATTGGGACTATCTCTCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGGGTCACCATATCAGTGGACACGTCCAAG  180
V  95.5% (235/246)  IGHV4-38-2*01  139  .............G.....A..........................................A..............A............  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                         N  Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  V  S  T  T  L  P  G  V 
                    Query_3246     181  AACCAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTCCTGTGCGAGAGTCTCGACTACTCTTCCTGGGGTC  270
V  95.5% (235/246)  IGHV4-38-2*01  229  ................A......C...............................A..........------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-15*01    25   -------------------------------------------------------------------------......-----------  30

                                        -------------->                                 
                                         Y  I  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3246     271  TACATTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  100.0% (43/43)   IGHJ6*02       20   -----...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_121869

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           285     4e-79
IGHD3-10*02                                                                                           16.1    2.4  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCAGTTCA	ATGTTCGG	AGGTTCGCCAGCAGCAATCAATTTGTTCTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCAGTTCAATGTTCGGAGGTTCGCCAGCAGCAATCAATTTGTTCTCCTACGGAATGGACATC	AKDRSSMFGGSPAAINLFSYGMDI	240	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	24	17	4	3	70.8
FR3-IMGT	126	239	114	99	15	0	86.8
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	250	218	29	3	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  I  N  P  F  G  F  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3247   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCATCAATCCTTTTGGCTTCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  87.2% (218/250)  IGHV3-30*18  47   ....................................C.T...G.AGC.A....A.G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  F  D  G     S  K  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_3247   91   AGTGGGTGGCACTTATATCATTCGATGGA---TCTAAATACTATGCGGACTCCGTGAAGGGCCGTTTCACCGTCTCCAGAGACAACTCCG  177
V  87.2% (218/250)  IGHV3-30*18  137  ...........G.........AT......AGTAA............A.................A......A.............T...A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      G  G  T  L  D  L  Q  M  S  S  L  R  P  E  D  T  A  I  Y  F  C  A  K  D  R  S  S  M  F  G  
                    Query_3247   178  GGGGCACGCTGGATCTGCAAATGAGCAGCCTGAGACCTGAGGACACGGCTATTTACTTCTGTGCGAAAGATCGCAGTTCAATGTTCGGAG  267
V  87.2% (218/250)  IGHV3-30*18  227  A.AA.......T............A..........G..............G.G..T.A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD3-10*02  9    --------------------------------------------------------------------------------........--  16

                                      ----CDR3-IMGT------------------------------>                                
                                      G  S  P  A  A  I  N  L  F  S  Y  G  M  D  I  W  G  Q  G  A  T  V  T  V  S  S
                    Query_3247   268  GTTCGCCAGCAGCAATCAATTTGTTCTCCTACGGAATGGACATCTGGGGCCAAGGGGCCACGGTCACCGTCTCCTC  343
J  93.8% (45/48)    IGHJ6*02     14   ----------------------------......T......G..............A...................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_121868

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            371     6e-105
IGHD6-19*01                                                                                           18.0    0.57  
IGHJ5*02                                                                                              54.5    1e-11 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	CAAGG	AGTGCCTGGTAC	GGTGGG	GACCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGCAAGGAGTGCCTGGTACGGTGGGGACCGC	AGARSAWYGGDR	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	243	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  D  Y  W  M  I  W  V  R  Q  A  P  G  K  G  L  
                    Query_3248   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACTGACTATTGGATGATCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.6% (243/249)  IGHV3-7*03   47   ..........................................G.AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3248   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (243/249)  IGHV3-7*03   137  ..........................................................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  G  A  R  S  A  W  Y  G  
                    Query_3248   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCCGTGTATTACTGTGCGGGAGCAAGGAGTGCCTGGTACGGTG  270
V  97.6% (243/249)  IGHV3-7*03   227  ........................................G........................A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD6-19*01  10   --------------------------------------------------------------------------....G.......----  21

                                      ------->                                  
                                      G  D  R  W  G  Q  G  A  L  I  T  V  S  S  
                    Query_3248   271  GGGACCGCTGGGGCCAGGGAGCCCTAATCACCGTCTCCTCAG  312
J  90.0% (36/40)    IGHJ5*02     12   --....C.............A....GG...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_254992

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-3*01                                                                                            14.1    8.2  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	112	2	0	98.2
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_3249   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGCC  93
V  95.1% (235/247)  IGHV4-31*03  50   .....TCC...A.....................C......C.............................C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_3249   94   TGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  95.1% (235/247)  IGHV4-31*03  140  ....G.........T.C.........................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  S  Q  S  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  
                    Query_3249   184  AGAGCCAGTCCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCG  273
V  95.1% (235/247)  IGHV4-31*03  230  ...A.....T.........................................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  100.0% (51/51)   IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3249   274  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (51/51)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_254993

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     5e-95
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GATCTGGGTCCCGGATTGGCT	GGGGAGTT	CGCGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTGGGTCCCGGATTGGCTGGGGAGTTCGCGCCTACTTTGACTAC	ARSGSRIGWGVRAYFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3250   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTTAACAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (231/246)  IGHV3-23*01  47   ...............................A..........G...C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  T  T  S  G  V  S  T  D  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3250   91   AGTGGGTCTCAACTATTACTACTAGTGGTGTTTCCACAGACTCCGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.9% (231/246)  IGHV3-23*01  137  ...........G......G.GG........G.AG....T...A...............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  S  C  A  R  S  G  S  R  I  G  W  
                    Query_3250   181  AGAACACTCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTCCTGTGCGAGATCTGGGTCCCGGATTGGCTGGG  270
V  93.9% (231/246)  IGHV3-23*01  227  .......G............................................A....A........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD3-10*01  16   ---------------------------------------------------------------------------------------...  18

                                      GT-------------------->                                  
                                      G  V  R  A  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3250   271  GAGTTCGCGCCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (8/8)     IGHD3-10*01  19   .....----------------------------------------------------  23
J  100.0% (47/47)   IGHJ4*02     2    ----------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_121865

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           375     2e-106
IGHD3-9*01                                                                                            14.1    8.2   
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTTTGAC	CACGGCTTAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTGACCACGGCTTATACTACTTTGACTAC	ARDFDHGLYYFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  N  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3251   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCAATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.0% (245/250)  IGHV3-33*01  47   ...............................................T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  D  K  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_3251   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTGATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCA  180
V  98.0% (245/250)  IGHV3-33*01  137  ................................A......................................A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  D  H  G  L  Y  
                    Query_3251   181  AGAACACGCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGATTTTGACCACGGCTTATACT  270
V  98.0% (245/250)  IGHV3-33*01  227  ............A.......................................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-9*01   12   ----------------------------------------------------------------------.......-------------  18
J  100.0% (48/48)   IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3251   271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_254991

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           388     5e-110
IGHD6-13*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGGC	AGCAGCAGCTGG	ATAGGGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGCAGCAGCAGCTGGATAGGGGTTGACTCC	ARDQGSSSWIGVDS	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	22	2	0	91.7
FR2-IMGT	75	125	51	50	1	0	98
CDR2-IMGT	126	146	21	21	0	0	100
FR3-IMGT	147	260	114	110	4	0	96.5
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	258	10	0	96.3


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  S  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  
                    Query_3252   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGTAGTGTCTCTGGTGGCTCCATAAGTAATTACTACTGGAGCTGGATCCGGC  90
V  96.3% (258/268)  IGHV4-59*01  26   ................T.......................C.C..................C....G.......................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_3252   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGATATATCTATTACAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  96.3% (258/268)  IGHV4-59*01  116  ...............................G..........................C...............................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  R  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  
                    Query_3252   181  TATCAGTAGACACGTCCAGGAACCAGTTCTCCCTGAAGCTGAGTTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGATC  270
V  96.3% (258/268)  IGHV4-59*01  206  ..................A........................C................................C...........--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -------CDR3-IMGT--------------->                                  
                                      Q  G  S  S  S  W  I  G  V  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3252   271  AGGGCAGCAGCAGCTGGATAGGGGTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  100.0% (12/12)   IGHD6-13*01  7    -----............-------------------------------------------------  18
J  97.6% (41/42)    IGHJ4*02     7    ------------------------......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_254996

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           258     4e-71
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	18	8	0	69.2
CDR1-IMGT	30	53	24	13	11	0	54.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	204	39	0	84


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  A  S  G  S  T  F  S  T  Y  W  M  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_3253   4    CCCTGAGACTCTCCTGTGCAGCCTCTGGATCCACCTTTAGTACCTATTGGATGAGCTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAGT  93
V  84.0% (204/243)  IGHV4-59*01  50   .....TCC...A....CA.T.T......TGG.T..A.C....GT..C.ACTG........................G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N  
                    Query_3253   94   GGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAATC  183
V  84.0% (204/243)  IGHV4-59*01  140  .......G...A.........G.................A..C.......A.....................TA...A..........C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P  
                    Query_3253   184  AGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCCT  273
V  84.0% (204/243)  IGHV4-59*01  230  ..........G...C....C...........T............G.G....A...........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD7-27*01  4    ----------------------------------------------------------------........------------------  11
J  95.7% (44/46)    IGHJ5*02     6    -----------------------------------------------------------------------------.............  18

                                                                       
                                      W  G  Q  G  A  L  V  S  V  S  S  
                    Query_3253   274  GGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  306
J  95.7% (44/46)    IGHJ5*02     19   ...........A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_254997

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3254   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_3254   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_3254   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_3254   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_254994

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           308     4e-86
IGHD3-3*01                                                                                            18.0    0.58 
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGC	TACGATTTT	GGGTCATTGTGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGCTACGATTTTGGGTCATTGTGGTGGTTCGACCCC	ARGRYDFGSLWWFDP	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	24	15	6	3	62.5
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	249	225	21	3	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  A  M  A  W  L  R  Q  A  P  G  K  G  L  
                    Query_3255   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCACCTATGCCATGGCCTGGCTCCGCCAGGCTCCAGGGAAGGGGCTAC  90
V  90.4% (225/249)  IGHV3-21*01  47   ........................................C.GT.G....AG....AA....G.........................GG  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  M  S  G  S  S  S     S  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3255   91   AATGGGTCTCATCCATGAGTGGAAGCAGTAGT---AGTTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  177
V  90.4% (225/249)  IGHV3-21*01  137  .G..............T...A.T..T......TAC.TA....................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  V  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  R  Y  D  F  G  S  
                    Query_3255   178  AGAACTCACTGGTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGGTCGCTACGATTTTGGGTCAT  267
V  90.4% (225/249)  IGHV3-21*01  227  ...........TA.......................................G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD3-3*01   5    --------------------------------------------------------------------------.........-------  13

                                      ---------------->                                  
                                      L  W  W  F  D  P  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_3255   268  TGTGGTGGTTCGACCCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  97.8% (45/46)    IGHJ5*02     6    -----.........................C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_254995

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           39.1    3e-07
IGHJ2*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTGCCCATGA	ATTACTATGATAGTAGTGGCTCTTAC	ATTGGGAGCGTTA	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTGCCCATGAATTACTATGATAGTAGTGGCTCTTACATTGGGAGCGTTAGGTACTTCGATTTC	ARDVPMNYYDSSGSYIGSVRYFDF	238	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_3256   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTTTTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   ........................................G.....AC........C............C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  A  K  N 
                    Query_3256   91   TGGATTGGCTATGTCTATTCCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGCCGAGTCACCTTATCAGTGGACACGGCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G...A......A....................................T.........A.......A......T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------------C
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  V  P  M  N  Y  Y  D  S 
                    Query_3256   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATGTGCCCATGAATTACTATGATAGT  270
V  94.3% (231/245)  IGHV4-59*01  229  .............A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.3% (24/26)    IGHD3-22*01  3    ----------------------------------------------------------------------------..............  16

                                      DR3-IMGT------------------------------>                                  
                                       S  G  S  Y  I  G  S  V  R  Y  F  D  F  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3256   271  AGTGGCTCTTACATTGGGAGCGTTAGGTACTTCGATTTCTGGGGCCGTGGCACCCTGGTCACTGTCTCTTCAG  343
D  92.3% (24/26)    IGHD3-22*01  17   .....T.A....-------------------------------------------------------------  28
J  95.8% (46/48)    IGHJ2*01     6    -------------------------...........C...............................C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_170299

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-19*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCG	GCAGTGGCTGGTAC	GGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCGGCAGTGGCTGGTACGGGATTGACTAC	AKDRGSGWYGIDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_3257   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGCTGGATCCGGCAGACCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   .............................................T.......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_3257   91   TGGATTGGGTATATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ....................C...................................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  D  R  G  S  G  W  Y  G  I 
                    Query_3257   181  CAGTTCTCCCTGAGGCTGAACTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAAAGATCGCGGCAGTGGCTGGTACGGGATT  270
V  96.7% (237/245)  IGHV4-59*01  229  .............A.....G...........................G.............G...-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (14/14)   IGHD6-19*01  8    ----------------------------------------------------------------------..............------  21
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_3257   271  GACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  310
J  97.6% (41/42)    IGHJ4*02     9    ...................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_21661

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           343     2e-96
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACCGCGAAAG	GGGGGAGT	GGTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACCGCGAAAGGGGGGAGTGGTCTTGATATC	ARDTAKGGSGLDI	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  A  V  S  S  S  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_3258   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCGCCGTCAGCAGCAGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  93.6% (235/251)  IGHV4-61*01  49   .................................T..........TG...G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_3258   91   CTGGAATGGATTGGGTATATCTACTACGGTGGAGACACCAAGTACAACCCCTCCCTCAAGAGTCGCGTCACCATATCATTAGACACGTCC  180
V  93.6% (235/251)  IGHV4-61*01  139  .....G.................T...A....GAG......C.......................A............G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  S  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  D  T  A  K  G  G  S 
                    Query_3258   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGGCCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATACCGCGAAAGGGGGGAGT  270
V  93.6% (235/251)  IGHV4-61*01  229  .................................A...................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-16*01  18   ----------------------------------------------------------------------------------........  25

                                      ----------->                                  
                                       G  L  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_3258   271  GGTCTTGATATCTGGGGCCAAGGGACAATGGTCATCGTCTCTTCAG  316
J  97.6% (41/42)    IGHJ3*02     9    ----..............................C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_75915

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           400     9e-114
IGHD3-10*01                                                                                           35.3    4e-06 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGATAT	TATGGTTCGGGGGCTTATTATAAC	GAACATTATTAT	TACAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGATATTATGGTTCGGGGGCTTATTATAACGAACATTATTATTACAGTTTGGACGTC	ASGYYGSGAYYNEHYYYSLDV	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	272	16	0	94.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N  N  Y
                    Query_3259   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAATAACTA  90
V  94.4% (272/288)  IGHV1-69*01  6    ..................G................................................................GC.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  L  S  W  V  R  Q  V  P  G  Q  G  L  E  W  M  G  G  I  V  P  I  F  G  S  A  N  Y  A  Q
                    Query_3259   91   TGCTTTGAGCTGGGTGCGACAGGTCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCGTCCCTATCTTTGGTTCAGCAAATTACGCACA  180
V  94.4% (272/288)  IGHV1-69*01  96   ....A.C................C..................................A..............A.......C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  T  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_3259   181  GAAGTTCCAGGGCACAGTCACGATTACCGCGGACGAATCCACGAGCACCGCCTACATGGAGCTGAGCAGCCTGAGATCTGAAGACACGGC  270
V  94.4% (272/288)  IGHV1-69*01  186  ..............G.................................A................................G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        I  Y  Y  C  A  S  G  Y  Y  G  S  G  A  Y  Y  N  E  H  Y  Y  Y  S  L  D  V  W  G  Q  G  T
                    Query_3259   271  CATATATTATTGTGCGAGCGGATATTATGGTTCGGGGGCTTATTATAACGAACATTATTATTACAGTTTGGACGTCTGGGGCCAAGGGAC  360
V  94.4% (272/288)  IGHV1-69*01  276  .G.G.....C........------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  91.7% (22/24)    IGHD3-10*01  8    -------------------------............AG..........-----------------------------------------  31
J  95.8% (46/48)    IGHJ6*02     15   -------------------------------------------------------------...G..A......................  43

                                                         
                                        T  V  T  V  S  S 
                    Query_3259   361  CACGGTCACCGTCTCCTCA  379
J  95.8% (46/48)    IGHJ6*02     44   ...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_99378

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           422     2e-120
IGHD1-1*01                                                                                            14.1    9.2   
IGHJ3*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-1*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCATATATAGT	CTGGAAC	C	TATCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCATATATAGTCTGGAACCTATC	ATIYSLEPI	289	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	292	4	4	0	0	100
Total	N/A	N/A	292	281	11	0	96.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_3260   1    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGGTACACCTTTACC  90
V  96.2% (281/292)  IGHV1-18*01  1    .....T.....G.................................................................T............  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  L  G  F  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 
                    Query_3260   91   AGCCTTGGTTTCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTAT  180
V  96.2% (281/292)  IGHV1-18*01  91   ...TA....A...G............................................................................  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  L  Q  D  R  V  S  V  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_3260   181  GCACAGAAGCTCCAGGACAGAGTCTCCGTGACCACAGACACATCCACGAGCACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGAC  270
V  96.2% (281/292)  IGHV1-18*01  181  ................G.......A..A......................................C.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><--------CDR3-IMGT-------->                                  
                                       T  A  V  Y  Y  C  A  T  I  Y  S  L  E  P  I  W  G  Q  G  A  V  V  T  V  S  S  
                    Query_3260   271  ACGGCCGTGTATTACTGTGCGACCATATATAGTCTGGAACCTATCTGGGGCCAAGGGGCAGTGGTCACCGTCTCTTCAG  349
V  96.2% (281/292)  IGHV1-18*01  271  ......................---------------------------------------------------------  292
                                       T  A  V  Y  Y  C  A                                                           
D  100.0% (7/7)     IGHD1-1*01   8    ---------------------------------.......---------------------------------------  14
J  94.7% (36/38)    IGHJ3*02     13   -----------------------------------------................A..A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_283747

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         336     1e-94
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	N/A	N/A	TCACCTGCCAACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGATCACCTGCCAACCCCTACTACCACGCTCTGGACGTC	ARSPANPYYHALDV	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  V  Y  I  S  N  G  G  Y  S  W  T  W  I  R  Q  P  P  G  R  G 
                    Query_3261     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTACATCAGCAATGGTGGTTACTCCTGGACCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  93.2% (232/249)  IGHV4-30-2*01  49   ..................G............G..C........G.................G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Q  S  G  S  T  Y  Y  N  P  S  L  R  S  R  A  T  I  S  V  D  R  S 
                    Query_3261     91   CTGGAGTGGATTGGGTACATCTATCAAAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGCGCCACCATATCGGTAGACAGGTCC  180
V  93.2% (232/249)  IGHV4-30-2*01  139  ..........................T...............................A......A.T.........A............  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  V  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  A  N  P  Y  Y 
                    Query_3261     181  AAGAACCAGTTCTCCGTTAACTTGAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGATCACCTGCCAACCCCTACTAC  270
V  93.2% (232/249)  IGHV4-30-2*01  229  ...............C.G..GC....C..........................G...............---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  92.7% (51/55)    IGHJ6*02       8    -----------------------------------------------------------------------------------.......  14

                                        -------------->                                 
                                         H  A  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3261     271  CACGCTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  318
J  92.7% (51/55)    IGHJ6*02       15   T...G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_283746

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70D*04                                                                                          366     2e-103
IGHJ6*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70D*04	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGAT	N/A	N/A	N/A	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACACGGATGGACGTC	TRMDV	263	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	44	2	0	95.7
CDR1-IMGT	47	76	30	24	6	0	80
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	106	8	0	93
CDR3-IMGT (germline)	263	270	8	7	1	0	87.5
Total	N/A	N/A	270	252	18	0	93.3


Alignments

                                       <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                         L  V  K  S  T  Q  T  L  T  L  T  C  S  F  S  G  F  S  L  S  T  G  G  M  R  V  S  W  I  R
                    Query_3262    1    GCTGGTGAAATCCACACAGACCCTCACACTGACCTGCTCCTTCTCTGGGTTCTCACTTTCCACTGGGGGTATGCGTGTGAGTTGGATCCG  90
V  93.3% (252/270)  IGHV2-70D*04  30   ..........C..........................A...................CAG....A.T..A...........C........  119
                                         L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  R  V  S  W  I  R

                                       -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                         Q  P  P  G  K  A  L  E  W  L  A  R  I  D  W  D  D  D  K  F  Y  S  T  S  L  K  T  R  L  T
                    Query_3262    91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACGCATTGATTGGGATGATGATAAATTCTACAGTACATCTCTGAAGACCAGACTCAC  180
V  93.3% (252/270)  IGHV2-70D*04  120  ..................................................................C.................G.....  209
                                         Q  P  P  G  K  A  L  E  W  L  A  R  I  D  W  D  D  D  K  F  Y  S  T  S  L  K  T  R  L  T

                                       ---------------------FR3-IMGT----------------------------------------------------><--CDR3-
                                         I  S  K  D  S  S  K  N  Q  V  V  L  R  L  T  N  M  D  P  A  D  T  A  T  Y  Y  C  T  R  M
                    Query_3262    181  CATCTCCAAGGACTCCTCCAAAAACCAGGTGGTCCTTAGATTGACCAACATGGACCCTGCAGACACAGCCACATATTACTGTACACGGAT  270
V  93.3% (252/270)  IGHV2-70D*04  210  .............A........................C.A..................TG...........G.........G.......  299
                                         I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                       IMGT-->                              
                                         D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_3262    271  GGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  307
J  100.0% (37/37)   IGHJ6*02      23   .....................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_283745

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           333     1e-93
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAGTACCAA	ATAGCAGT	CCAATACCCACC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCCAGTACCAAATAGCAGTCCAATACCCACCCTTTGACTTC	VRGQYQIAVQYPPFDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  L  T  D  Y  A  M  Y  W  V  R  Q  A  P  G  K  G  P  
                    Query_3263   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTGACTGACTATGCAATGTACTGGGTCCGCCAGGCTCCAGGCAAGGGGCCGG  90
V  92.8% (231/249)  IGHV3-30*03  47   ....................................C...C.G.AG.....GC...C..............................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  H  G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  
                    Query_3263   91   AGTGGGTGGCCCTTATATCATATCATGGAAGTAATAAATTCTATGCAGACTCCGTGAAGGGCCGATTTACCATCTCCAGAGACATTTCCA  180
V  92.8% (231/249)  IGHV3-30*03  137  ..........AG...........G...............A...........................C................A.....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  G  Q  Y  Q  I  A  V  
                    Query_3263   181  AGAGCACGCTATATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGTGAGAGGCCAGTACCAAATAGCAGTCC  270
V  92.8% (231/249)  IGHV3-30*03  227  ...A......G....................................................C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  5    --------------------------------------------------------------------------------........--  12

                                      T------------------>                                  
                                      Q  Y  P  P  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3263   271  AATACCCACCCTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.7% (43/44)    IGHJ4*02     5    ----------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_283744

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            339     1e-95
IGHJ2*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	N/A	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	GCACGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCACGGATCCTGGTGCTTCGATTTC	ARHGSWCFDF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  E  A  S  G  F  T  F  N  T  Y  W  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_3264  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAATACCTACTGGATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-7*03  47   .....................C....................G..G...T......A.................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  T  D  G  S  T  Q  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_3264  91   AGTGGGTGGCCAACATAAAGACAGATGGAAGTACTCAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACCCCA  180
V  93.9% (232/247)  IGHV3-7*03  137  ....................CA..........GAGA..................................................G...  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                     T  N  S  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  H  G  S  W  C  F  D  
                    Query_3264  181  CGAACTCACTGTATTTGCAACTGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGGCACGGATCCTGGTGCTTCGATT  270
V  93.9% (232/247)  IGHV3-7*03  227  A.............C.....A..............................................-----------------------  293
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  92.0% (46/50)    IGHJ2*01    4    ----------------------------------------------------------------------------.....A.......C  17

                                     ->                                  
                                     F  W  G  R  G  T  L  V  S  V  S  P  
                    Query_3264  271  TCTGGGGCCGTGGCACCCTGGTCAGTGTCTCCCCAG  306
J  92.0% (46/50)    IGHJ2*01    18   ........................C.......T...  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_283742

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            353     1e-99
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ3*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGATAACCCGTATCACCATGAA	AGTAATGCTTA	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCAGAGATGATAACCCGTATCACCATGAAAGTAATGCTTACTATGATGCTTTCGATATC	TRDDNPYHHESNAYYDAFDI	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3265   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAATAACTATTGGATGACCTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-7*03   47   ..........................................G..G...........G..................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  R  H  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3265   91   AGTGGGTGGCCAACATAAGGCACGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-7*03   137  ..................A...A...............T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  D  S  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  D  D  N  P  Y  H  H  
                    Query_3265   181  AGGACTCACTGTATCTGCAATTGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTACCAGAGATGATAACCCGTATCACCATG  270
V  95.2% (238/250)  IGHV3-7*03   227  ..A.................A...............................G.........G.G.....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      E  S  N  A  Y  Y  D  A  F  D  I  G  G  Q  G  T  M  V  T  V  S  S  
                    Query_3265   271  AAAGTAATGCTTACTATGATGCTTTCGATATCGGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
D  90.9% (10/11)    IGHD3-16*01  23   --...T.......-----------------------------------------------------  33
J  96.0% (48/50)    IGHJ3*02     1    ----------------.........T......T.................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_99370

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           352     3e-99
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCGTGCTGTTA	ACTATGATAGTGGTG	ATTCCGGTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CGTGCTGTTAACTATGATAGTGGTGATTCCGGTTGGTACTTTGACTAC	RAVNYDSGDSGWYFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	241	113	109	4	0	96.5
Total	N/A	N/A	241	233	8	0	96.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3266   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACTTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.7% (233/241)  IGHV3-33*01  47   .....................................C.......G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  E  K  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3266   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTGAAAAATACTATGCAGACTCCTTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.7% (233/241)  IGHV3-33*01  137  ................................A.T..................G....................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  R  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  R  A  V  N  Y  D  S  G  D  
                    Query_3266   181  AGCGCACACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGCCGTGCTGTTAACTATGATAGTGGTGATT  270
V  96.7% (233/241)  IGHV3-33*01  227  ..AA...G.....................................................-----------------------------  287
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                
D  93.3% (14/15)    IGHD3-22*01  6    ------------------------------------------------------------------------...........A...---  20

                                      T------------------>                                  
                                      S  G  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3266   271  CCGGTTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (46/46)   IGHJ4*02     3    --------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_283740

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           400     9e-114
IGHD5-12*01                                                                                           18.0    0.65  
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD5-12*01	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGGGC	AGTGGCTAC	TACGGGGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGCAGTGGCTACTACGGGGGTGCTTTTGATATC	ARMGSGYYGGAFDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	272	16	0	94.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  S  H 
                    Query_3267   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGTCAT  91
V  94.4% (272/288)  IGHV1-18*01  7    .................................................A....................................CT..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  L  A  P  G  Q  G  L  E  W  M  G  Y  I  T  N  Y  N  N  N  T  D  Y  A  Q 
                    Query_3267   92   GGTATCAGCTGGGTGCGACTGGCCCCTGGACAAGGGCTTGAGTGGATGGGATACATCACCAATTACAATAATAACACAGACTATGCACAG  181
V  94.4% (272/288)  IGHV1-18*01  97   ...................A................................GG....G.GC.......GG.......A...........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  N  L  R  S  D  D  T  A 
                    Query_3267   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAATCTGAGATCTGACGACACGGCC  271
V  94.4% (272/288)  IGHV1-18*01  187  ...C...............................................................GC.....................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  F  Y  C  A  R  M  G  S  G  Y  Y  G  G  A  F  D  I  *  G  Q  G  T  M  V  T  V  S  S  
                    Query_3267   272  GTGTTTTACTGTGCGAGAATGGGCAGTGGCTACTACGGGGGTGCTTTTGATATCTAGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  359
V  94.4% (272/288)  IGHV1-18*01  277  ....A.............----------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (9/9)     IGHD5-12*01  9    ------------------------.........-------------------------------------------------------  17
J  97.9% (46/47)    IGHJ3*02     4    -----------------------------------------..............G................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_250752

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           366     2e-103
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TCCCGGGAGTCT	TATGATAGTAGTGGTTAT	GGAGCGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATCCCGGGAGTCTTATGATAGTAGTGGTTATGGAGCGGGCTAC	AKSRESYDSSGYGAGY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  S  Y  G  M  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_3268   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATAGTTATGGCATGCAGTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (241/248)  IGHV3-30*18  47   ..........................................G...C...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3268   91   AGTGGGTGGCACTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  97.2% (241/248)  IGHV3-30*18  137  ...........G..............................................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  V  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  S  R  E  S  Y  D  S  
                    Query_3268   181  AGAACACGGTGTCTCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTACTACTGTGCGAAATCCCGGGAGTCTTATGATAGTA  270
V  97.2% (241/248)  IGHV3-30*18  227  ........C...A..........................................T............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (18/18)   IGHD3-22*01  8    --------------------------------------------------------------------------------..........  17

                                      T------------------>                                  
                                      S  G  Y  G  A  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3268   271  GTGGTTATGGAGCGGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (18/18)   IGHD3-22*01  18   ........----------------------------------------------  25
J  100.0% (38/38)   IGHJ4*02     11   ----------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_250753

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD4-17*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGAGGGAAGTATG	CGGTGAC	AC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGAGGGAAGTATGCGGTGACACACTAC	RE*EGSMR*HTT	237	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	101	51	47	3	1	92.2
CDR2-IMGT	102	122	21	19	2	0	90.5
FR3-IMGT	123	236	114	107	7	0	93.9
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	244	226	17	1	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  A  G  D  S  I  N  N  Y  Y  W  S  W  L  R  Q  P   Q  G  R  D  W  S
                    Query_3269   1    ACCCTGTCCCTCACCTGCACTGTCGCTGGTGACTCCATCAACAATTACTACTGGAGCTGGTTGCGGCAGCCCC-AGGGAAGGGACTGGAG  89
V  92.6% (226/244)  IGHV4-59*01  49   ........................T......G........GT.G................A.C..........C................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                        G  L  D  I  S  I  T  V  G  T  P  T  T  T  P  P  S  R  V  E  S  A  C  Q  *  T  R  P  R  N
                    Query_3269   90   TGGATTGGATATATCTATTACAGTGGGTACACCAACTACAACCCCTCCCTCGAGAGTCGAGTCAGCATGTCAGTAGACACGTCCAAGAAA  179
V  92.6% (226/244)  IGHV4-59*01  139  ........G..................AG......................A............C...A....................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                        S  S  P  *  T  *  P  L  *  P  L  R  T  R  P  S  I  T  V  R  E  *  E  G  S  M  R  *  H  T
                    Query_3269   180  CAGTTCTCCCTGAACCTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTAGGAGGGAAGTATGCGGTGACACAC  269
V  92.6% (226/244)  IGHV4-59*01  229  ..............G....G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD4-17*01  7    -------------------------------------------------------------------------------.......----  13
J  100.0% (39/39)   IGHJ4*02     10   ----------------------------------------------------------------------------------------..  11

                                      -->                                  
                                        T  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_3269   270  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (39/39)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_87748

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         316     2e-88
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	GGAGTCGTAATTAT	CATGGGAATT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGAGTCGTAATTATCATGGGAATTACTACTTTGGCCAG	ARGSRNYHGNYYFGQ	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  A  Y  Y  S  L  N  W  I  R  R  T  P  L  K  G 
                    Query_3270     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGACAGTGCTTATTACTCCTTGAACTGGATCCGGCGGACACCACTGAAGGGC  90
V  90.4% (226/250)  IGHV4-30-2*01  49   ..................G....................AG.....G.GG........G..G...........A.C.....GG.......  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  G  G  A  T  Y  Y  N  P  S  L  E  S  R  V  T  L  S  V  D  R  S 
                    Query_3270     91   CTGGAGTGGATTGGCTACATCTATCATGGTGGGGCCACCTACTACAACCCGTCCCTCGAGAGTCGAGTCACCCTCTCAGTAGACCGGTCC  180
V  90.4% (226/250)  IGHV4-30-2*01  139  ..............G............A.....AG......................A..............A.A.........A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  N  Q  F  S  L  R  L  I  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  R  N  Y  H  G 
                    Query_3270     181  AAGAACCAGTTCTCCCTGAGGCTGATTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGAGGGAGTCGTAATTATCATGGG  270
V  90.4% (226/250)  IGHV4-30-2*01  229  ...................A.....GC..........................G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  85.7% (12/14)    IGHD3-3*01     15   ----------------------------------------------------------------------.....G..T.....------  28

                                        ----------------->                                  
                                         N  Y  Y  F  G  Q  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_3270     271  AATTACTACTTTGGCCAGTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTCAG  322
J  89.6% (43/48)    IGHJ4*02       1    ----.........A.T.C.............C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_87749

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            272     2e-75
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAGGAC	TAGCACCACCTGG	AGCGGGAACAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGACTAGCACCACCTGGAGCGGGAACATACAACTGGTTCGACCCC	ARLGLAPPGAGTYNWFDP	230	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	17	7	0	70.8
FR2-IMGT	41	91	51	48	3	0	94.1
CDR2-IMGT	92	115	24	19	5	0	79.2
FR3-IMGT	116	229	114	105	9	0	92.1
CDR3-IMGT (germline)	230	235	6	6	0	0	100
Total	N/A	N/A	222	198	24	0	89.2


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  L  R  F  S  S  I  W  V  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  H  I  N  Q  D 
                    Query_3271   14   TCTGGACTCAGGTTCAGTAGTATTTGGGTGAGCTGGGTCCGCCAGGCTCCTGGGAAGGGGCTGGAGTGGGTGGCCCACATAAATCAAGAT  103
V  89.2% (198/222)  IGHV3-7*01   73   ......T...CC..T.....CTA....A......................A........................A.......G......  162
                                       S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  K  Q  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       A  S  D  H  Y  Y  L  D  S  V  K  G  R  F  T  V  S  R  D  N  A  K  S  S  V  F  L  Q  M  N 
                    Query_3271   104  GCAAGTGACCACTACTATCTGGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCAAGAGTTCAGTGTTTCTGCAAATGAAC  193
V  89.2% (198/222)  IGHV3-7*01   163  .G......GA.A......G..........................A.....................AC...C...A.............  252
                                       G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><----------------------CDR3-IMGT--------------------->
                                       S  L  T  A  E  D  T  A  V  Y  Y  C  A  R  L  G  L  A  P  P  G  A  G  T  Y  N  W  F  D  P 
                    Query_3271   194  AGCCTGACAGCCGAAGACACGGCTGTTTATTACTGTGCGAGACTAGGACTAGCACCACCTGGAGCGGGAACATACAACTGGTTCGACCCC  283
V  89.2% (198/222)  IGHV3-7*01   253  .......G......G...........G...............------------------------------------------------  294
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  84.6% (11/13)    IGHD6-13*01  6    -------------------------------------------------.....G..G....----------------------------  18
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------.................  17

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3271   284  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  317
J  100.0% (51/51)   IGHJ5*02     18   ..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_250756

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_3272  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01  49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_3272  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01  139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_3272  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01  229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01  13   ----------------------------------------------------------------------.....C..G...--------  24

                                     ----------->                                  
                                      G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_3272  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02    6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_250757

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           330     1e-92
IGHD6-6*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	TC	ATAGCAGTTCGT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACTCATAGCAGTTCGTACTACTATGAGTAC	TTHSSSYYYEY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	232	21	0	91.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  T  W  L  S  W  V  R  Q  D  P  E  K  G  L  
                    Query_3273   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACACCTGGCTGAGCTGGGTCCGCCAGGATCCAGAGAAGGGTCTGG  90
V  91.7% (232/253)  IGHV3-15*01  47   .......T.......................................G.....A..................C.....G......G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      A  W  V  G  R  I  K  S  E  T  H  G  G  T  T  D  Y  P  A  P  V  K  G  R  F  T  V  S  R  D  
                    Query_3273   91   CGTGGGTTGGCCGTATTAAAAGCGAGACTCATGGTGGGACAACAGACTACCCTGCACCCGTGAAAGGCAGATTCACCGTCTCTAGAGATG  180
V  91.7% (232/253)  IGHV3-15*01  137  A......................A.A...G....................G..........................A....A.......  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  D  T  L  Y  L  H  M  N  D  L  K  S  E  D  T  A  V  Y  F  C  T  T  H  S  S  S  Y  
                    Query_3273   181  ATTCAAAAGACACACTGTATCTGCACATGAACGACCTGAAAAGCGAGGACACAGCCGTGTATTTCTGCACCACTCATAGCAGTTCGTACT  270
V  91.7% (232/253)  IGHV3-15*01  227  ........A....G...........A......AG........C....................A...T.....-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  91.7% (11/12)    IGHD6-6*01   5    ---------------------------------------------------------------------------.......C....---  16
J  91.7% (44/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  Y  E  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_3273   271  ACTATGAGTACTGGGGTCAGGGAACCCGGGTCACCGTCTCCTCAG  315
J  91.7% (44/48)    IGHJ4*02     4    ...T...C........C..........T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_87744

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         386     1e-109
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	N/A	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	CATTAAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTAAGACTACTTTGACTAC	ARH*DYFDY	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  R  G  F  G  Y  S  F  T  S  F
                    Query_3274     1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGTTTTGGATACAGCTTTACCAGCTT  90
V  92.7% (268/289)  IGHV5-10-1*01  6    ....................C.........................................A.....C....................A  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  F  D  S  S  T  D  Y  T  P
                    Query_3274     91   CTGGATCACTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAGAATTGATCCTTTTGACTCTTCTACCGACTATACGCC  180
V  92.7% (268/289)  IGHV5-10-1*01  96   ........GC.........................................G..G.........AG........A....A....C.GC..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  N  S  I  S  T  A  Y  L  H  L  S  S  L  K  A  S  D  T  G
                    Query_3274     181  GTCATTCCAAGGCCACGTCACCATCTCAGCTGACAACTCCATCAGTACTGCCTACCTGCACTTGAGCAGCCTGAAGGCCTCGGACACCGG  270
V  92.7% (268/289)  IGHV5-10-1*01  186  ...C................................G........C..............G.G..........................C  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------CDR3-IMGT-------->                                  
                                          M  Y  Y  C  A  R  H  *  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3274     271  CATGTATTACTGTGCGAGACATTAAGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  344
V  92.7% (268/289)  IGHV5-10-1*01  276  ...................-------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                        
J  100.0% (48/48)   IGHJ4*02       1    --------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_87745

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_3275   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.0% (223/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  V  S  V  D  T  S  K  S 
                    Query_3275   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCGTTTCAGTAGACACGTCCAAGAGC  180
V  91.0% (223/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T....A.A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  I  S  L  S  L  S  A  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_3275   181  CAGATCTCCCTGAGCCTGAGCGCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  91.0% (223/245)  IGHV4-59*01  229  ...T.........AG......T.................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_3275   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_87746

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           366     2e-103
IGHD3-22*01                                                                                           39.1    3e-07 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGAATAATCG	ATTACTATGATAGTAGTGGT	CTAGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGACATGGAATAATCGATTACTATGATAGTAGTGGTCTAGCCTACTTTGACCAG	ARHGIIDYYDSSGLAYFDQ	249	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	245	11	0	95.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  G  S  T  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_3276   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCAGCTTCAGTGGCTCTACTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  95.7% (245/256)  IGHV3-73*01  47   .........A..........................C.............G.......................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  T  K  A  N  S  Y  A  T  V  Y  A  V  S  V  K  G  R  F  T  I  S  R  D  
                    Query_3276   91   AGTGGGTTGGCCGTATTAGAACCAAAGCCAACAGTTACGCGACAGTATATGCTGTGTCGGTGAAAGGCAGGTTCACCATTTCCAGAGATG  180
V  95.7% (245/256)  IGHV3-73*01  137  .....................G......T................C........C........................C..........  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  H  G  I  I  D  
                    Query_3276   181  ATTCAAAGAACACGGCGTATCTGCAAATGAACAGTCTGAAAACCGAGGACACGGCCGTGTATTATTGTGCTAGACATGGAATAATCGATT  270
V  95.7% (245/256)  IGHV3-73*01  227  ..................................C.............................C...A.......--------------  302
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (20/20)   IGHD3-22*01  3    ---------------------------------------------------------------------------------------...  5

                                      --CDR3-IMGT----------------------->                                  
                                      Y  Y  D  S  S  G  L  A  Y  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3276   271  ACTATGATAGTAGTGGTCTAGCCTACTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  100.0% (20/20)   IGHD3-22*01  6    .................----------------------------------------------------  22
J  95.7% (45/47)    IGHJ4*02     2    ----------------------..........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_87747

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     5e-89
IGHD6-19*01                                                                                           12.2    30   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGACGGGT	TGGCTG	CCC	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGACGGGTTGGCTGCCCGACGAC	ERDGLAARR	239	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	103	52	45	6	1	86.5
CDR2-IMGT	104	124	21	16	5	0	76.2
FR3-IMGT	125	238	114	109	5	0	95.6
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	245	226	18	1	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><---------------------FR2-IMGT---------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  Y  C  N  W  I  R  Q  Y  P  R  E  G  T  G 
                    Query_3277   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTACTACTGCAACTGGATCCGGCAGTACCCCCGGGAAGGGACTGGA  90
V  92.2% (226/245)  IGHV4-59*01  49   ...............................G..........A..........G.G.............C-....A..............  137
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q   P  P  G  K  G  L  E

                                      ------------><-----CDR2-IMGT-----><----------------------------------------------------FR3
                                       V  D  W  T  Y  L  Q  H  W  E  H  Q  L  Q  P  L  P  Q  E  S  S  H  H  I  S  G  H  V  Q  E 
                    Query_3277   91   GTGGATTGGACATATCTTCAACACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAA  180
V  92.2% (226/245)  IGHV4-59*01  138  .........GT......ATT...G.....G.............................................A..............  227
                                        W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N

                                      -IMGT----------------------------------------------------><----------CDR3-IMGT--------->  
                                       P  D  L  L  E  P  E  L  C  D  R  C  G  H  G  R  V  L  L  C  E  R  D  G  L  A  A  R  R  L 
                    Query_3277   181  CCAGATCTCCTTGAACCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGACGGGTTGGCTGCCCGACGACTG  270
V  92.2% (226/245)  IGHV4-59*01  228  ....T.....C....G....G............................................-------------------------  292
                                        Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                           
D  100.0% (6/6)     IGHD6-19*01  12   -------------------------------------------------------------------------......-----------  17
J  97.5% (39/40)    IGHJ4*02     9    ----------------------------------------------------------------------------------...T....  16

                                                                      
                                       G  P  G  N  P  G  H  R  L  L   
                    Query_3277   271  GGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  302
J  97.5% (39/40)    IGHJ4*02     17   ................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_87740

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           279     3e-77
IGHD6-25*01                                                                                           14.1    9.1  
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGCAGTGCAATGTTCCAAGGTTCGC	CAGCGGC	AGGCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCGCAGTGCAATGTTCCAAGGTTCGCCAGCGGCAGGCAACTACTTCTCCTACGGGATGGACGTC	AKDRSAMFQGSPAAGNYFSYGMDV	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	214	36	0	85.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  T  S  G  F  T  F  T  A  H  G  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3278   1    GGTCCCTGAGACTCTCCTGTGAAACTTCTGGGTTCACCTTCACCGCCCACGGCTTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  85.6% (214/250)  IGHV3-30*18  47   .....................C.G.C.....A..........GTAG.T.T...A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  L  S  F  D  G  Y  G  R  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_3278   91   AGTGGGTGGCCCTTTTGTCGTTTGATGGATATGGAAGATTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCA  180
V  85.6% (214/250)  IGHV3-30*18  137  ..........AG..A.A..A.A.......AG.AAT.A..A...........................................A.T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  K  T  L  Y  L  Q  M  D  S  L  R  P  E  D  T  G  F  Y  F  C  A  K  D  R  S  A  M  F  Q  
                    Query_3278   181  AGAAGACACTGTATCTGCAAATGGACAGCCTGCGACCTGAGGACACGGGTTTTTACTTCTGTGCGAAAGACCGCAGTGCAATGTTCCAAG  270
V  85.6% (214/250)  IGHV3-30*18  227  ....C..G...............A........A..G............C.G.G..T.A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      ----CDR3-IMGT------------------------------>                                 
                                      G  S  P  A  A  G  N  Y  F  S  Y  G  M  D  V  W  G  P  G  T  T  V  T  V  S  S 
                    Query_3278   271  GTTCGCCAGCGGCAGGCAACTACTTCTCCTACGGGATGGACGTCTGGGGCCCAGGGACCACGGTCACCGTCTCTTCA  347
D  100.0% (7/7)     IGHD6-25*01  9    ------.......----------------------------------------------------------------  15
J  91.5% (54/59)    IGHJ6*02     4    ------------------......A..A......T................A.....................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_87742

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3279   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (226/248)  IGHV3-21*01  47   ............................T............AG...C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  G  
                    Query_3279   91   AGTGGGTCTCATCCATCAGTAGTAGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  91.1% (226/248)  IGHV3-21*01  137  ................T........T...AGT......T.C..C..A......G..A..............................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_3279   181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  91.1% (226/248)  IGHV3-21*01  227  ....C..................AA...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3279   271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_166718

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_3280   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  V  S  V  D  T  S  K  S 
                    Query_3280   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCGTTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T....A.A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  I  S  L  S  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_3280   181  CAGATCTCCCTGAGCCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ...T.........AG........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_3280   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_166719

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           425     3e-121
IGHD3-22*01                                                                                           33.4    2e-05 
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TC	ACTATGAAAGTAGTGATTATTAC	ACAGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCACTATGAAAGTAGTGATTATTACACAGATGATGCTTTTAATATC	ASHYESSDYYTDDAFNI	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	280	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  T  S  G  Y  S  F  T  S  Y
                    Query_3281   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGCTTTACCAGCTA  90
V  97.2% (280/288)  IGHV5-51*03  6    ................................................................GG........................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  L  I  Y  P  S  D  S  D  T  T  Y  S  P
                    Query_3281   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGCCTCATCTATCCCAGTGACTCTGATACCACATACAGCCC  180
V  97.2% (280/288)  IGHV5-51*03  96   ........G..........................................GA..........TG...............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3281   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.2% (280/288)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  S  H  Y  E  S  S  D  Y  Y  T  D  D  A  F  N  I  W  G  Q  G  T  M  V  T  V
                    Query_3281   271  CATGTATTACTGTGCGAGTCACTATGAAAGTAGTGATTATTACACAGATGATGCTTTTAATATCTGGGGCCAAGGGACAATGGTCACCGT  360
V  97.2% (280/288)  IGHV5-51*03  276  ..................------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  91.3% (21/23)    IGHD3-22*01  6    --------------------.......T.......G.......-----------------------------------------------  28
J  98.0% (49/50)    IGHJ3*02     1    ------------------------------------------------..........G...............................  42

                                              
                                        S  S  
                    Query_3281   361  CTCTTCAG  368
J  98.0% (49/50)    IGHJ3*02     43   ........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_166714

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           375     3e-106
IGHD2-21*02                                                                                           18.0    0.66  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACTG	GGTGGGGACTACTAT	GGTCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTC	VRRLGGDYYGPFEF	290	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	70	4	0	94.6
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	296	7	6	1	0	85.7
Total	N/A	N/A	294	267	27	0	90.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  E  I  S  C  K  A  Y  G  Y  A  F  N  
                    Query_3282   3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCCGGGGAGTCTCTGGAGATCTCCTGTAAGGCTTATGGATACGCCTTTAACG  92
V  90.8% (267/294)  IGHV5-51*01  2    ............................G........................A...............G..C.......AG.....C.A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  G  W  V  R  Q  K  P  E  K  G  L  D  W  M  G  V  I  Y  P  D  D  L  D  T  T  Y  
                    Query_3282   93   ACTACTGGATCGGCTGGGTGCGCCAGAAGCCCGAGAAAGGCCTGGATTGGATGGGGGTCATCTATCCTGATGACCTTGATACGACATACA  182
V  90.8% (267/294)  IGHV5-51*01  92   G..........................T.....G............G.........A............G....TC......C.G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  N  T  I  Y  L  R  W  S  S  L  K  A  S  D  
                    Query_3282   183  GTCCGTCCTTCCAAGGCCAGGTCACAATCTCAGTCGACAAGTCCATCAACACCATCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  90.8% (267/294)  IGHV5-51*01  182  .C.......................C.......C..............G....GC........A..........................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  V  R  R  L  G  G  D  Y  Y  G  P  F  E  F  W  G  Q  G  T  Q  V  T  V  S  
                    Query_3282   273  CCGCCATGTATTATTGTGTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTCTGGGGCCAGGGAACCCAGGTCACCGTCTCCT  362
V  90.8% (267/294)  IGHV5-51*01  272  .............C....C.....------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  86.7% (13/15)    IGHD2-21*02  11   -----------------------------.....T....G....----------------------------------------------  25
J  93.0% (40/43)    IGHJ4*02     6    --------------------------------------------------.....C.A.................T..............  45

                                         
                                      S  
                    Query_3282   363  CAG  365
J  93.0% (40/43)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_166716

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           350     8e-99
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	C	GGGACTTATGC	CAACTCGCCA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGACTTATGCCAACTCGCCATACTGGTACTTCGATCTC	ASGTYANSPYWYFDL	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_3283   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCGGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.2% (236/248)  IGHV4-39*02  49   ...................C...........G.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  T  G  S  A  Y  H  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_3283   91   CTGGAGTGGATTGCGAGTATCTATTATACTGGGAGCGCCTACCACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  95.2% (236/248)  IGHV4-39*02  139  .............G..............G.......A.....T...............................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       N  N  H  F  S  L  Q  L  S  S  V  T  D  A  D  T  A  V  Y  Y  C  A  S  G  T  Y  A  N  S  P 
                    Query_3283   181  AACAACCACTTCTCCCTGCAGCTGAGCTCTGTGACCGACGCAGACACGGCTGTCTATTACTGTGCGAGCGGGACTTATGCCAACTCGCCA  270
V  95.2% (236/248)  IGHV4-39*02  229  ..G...............A..................C...............G..............----------------------  296
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.9% (10/11)    IGHD3-16*01  20   ---------------------------------------------------------------------....G......----------  30

                                      ----------------->                                  
                                       Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3283   271  TACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  322
J  100.0% (52/52)   IGHJ2*01     2    ....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_166710

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-20*01                                                                                           338     5e-95
IGHD3-10*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-20*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGG	GGTTCGGGGACTTATTATAA	GAATACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGGGGTTCGGGGACTTATTATAAGAATACTTTTGACTTG	ARRGSGTYYKNTFDL	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  D  D  Y  G  M  S  W  V  R  Q  G  P  G  K  G  L  
                    Query_3284   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCGATGACTATGGCATGAGCTGGGTCCGCCAAGGTCCAGGGAAGGGGCTGG  90
V  93.5% (232/248)  IGHV3-20*01  47   ....................................C...T.....T.........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  D  I  N  W  N  G  G  R  T  A  Y  A  D  S  L  R  G  R  F  I  I  A  R  D  N  A  
                    Query_3284   91   AGTGGGTCTCTGATATTAACTGGAATGGTGGTCGCACAGCTTATGCAGACTCTCTGAGGGGCCGATTCATCATCGCCAGAGACAACGCCA  180
V  93.5% (232/248)  IGHV3-20*01  137  ............G......T............A......G.............G...A...........C....T...............  226
                                      E  W  V  S  G  I  N  W  N  G  G  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  S  A  E  D  T  A  F  Y  H  C  A  R  R  G  S  G  T  Y  Y  
                    Query_3284   181  AGAATTCCCTCTATCTGCAAATGAACAGTCTGAGCGCCGAGGACACGGCCTTCTATCACTGTGCGAGAAGGGGTTCGGGGACTTATTATA  270
V  93.5% (232/248)  IGHV3-20*01  227  ....C.....G.......................A.................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R                       
D  95.0% (19/20)    IGHD3-10*01  11   -----------------------------------------------------------------------..........G........  29

                                      ---------------->                                
                                      K  N  T  F  D  L  W  G  P  G  T  L  V  A  V  S  S
                    Query_3284   271  AGAATACTTTTGACTTGTGGGGCCCGGGAACCCTGGTCGCCGTCTCCTC  319
D  95.0% (19/20)    IGHD3-10*01  30   .------------------------------------------------  30
J  90.2% (37/41)    IGHJ4*02     6    --------.......AC.......A.............A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_166711

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            353     9e-100
IGHD3-16*01                                                                                           14.1    8.5   
IGHJ5*01                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGC	GTATAATGAT	AAGTCCCCGAATCATA	GGTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGCGTATAATGATAAGTCCCCGAATCATAGGTCCGACTCC	AREAYNDKSPNHRSDS	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  G  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_3285   1    ACCCTGTCCCTCACCTGCGCAGTCTCTGGTGCCTCCATCAGCGGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.6% (237/248)  IGHV4-4*02   49   ....................T..........G..........A...............................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  V  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  R 
                    Query_3285   91   GAGTGGATTGGGGAAATCTATCATGTTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAGG  180
V  95.6% (237/248)  IGHV4-4*02   139  ........................AG........................................................A.....A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  N  D  K  S  P 
                    Query_3285   181  AACCAGTTCTCCCTCAATCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGAGGCGTATAATGATAAGTCCCCG  270
V  95.6% (237/248)  IGHV4-4*02   229  ..............G..G....G...........................G.................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  90.0% (9/10)     IGHD3-16*01  1    -----------------------------------------------------------------------....T.....---------  10

                                      ----------------->                                  
                                       N  H  R  S  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3285   271  AATCATAGGTCCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  95.6% (43/45)    IGHJ5*01     7    -------...T...............A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_166712

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           335     4e-94
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_3286   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.9% (229/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  P  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3286   91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGCCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCC  180
V  93.9% (229/244)  IGHV4-39*01  139  ...........................A....G.G.........CA.....T....C.................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_3286   181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  93.9% (229/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3286   271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_166713

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           361     4e-102
IGHD2-2*01                                                                                            18.0    0.61  
IGHJ6*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAC	TAACGATGGGAC	TACCATCTGCTA	AGGGGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGACTAACGATGGGACTACCATCTGCTAAGGGGGACGGTATGGACGTC	ARLTMGLPSAKGDGMDV	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	255	7	6	1	0	85.7
Total	N/A	N/A	255	243	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  S  A  M  H  W  V  R  Q  P  S  G  K  G  L  
                    Query_3287   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTCGCTCTGCTATGCACTGGGTCCGCCAGCCTTCCGGGAAAGGGCTGG  90
V  95.3% (243/255)  IGHV3-73*01  47   .........A..................................G..........................G..................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  S  N  T  N  S  Y  A  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_3287   91   AGTGGGTTGGCCGTATTAGAAGCAACACTAACAGTTACGCGACAGAATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATG  180
V  95.3% (243/255)  IGHV3-73*01  137  .........................AG..................C............................................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  K  N  T  A  Y  L  Q  M  H  R  L  K  T  E  D  T  S  V  Y  Y  C  A  R  L  T  M  G  L  
                    Query_3287   181  ATTCAAAGAACACGGCATATCTGCAAATGCACCGCCTGAAAACCGAGGACACGTCCGTGTATTATTGTGCTAGACTAACGATGGGACTAC  270
V  95.3% (243/255)  IGHV3-73*01  227  ................G............A..A....................G..........C...A......---------------  301
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  91.7% (11/12)    IGHD2-2*01   16   ---------------------------------------------------------------------------------------...  18

                                      DR3-IMGT-------------------->                                 
                                      P  S  A  K  G  D  G  M  D  V  W  G  R  G  T  S  V  I  V  S  S 
                    Query_3287   271  CATCTGCTAAGGGGGACGGTATGGACGTCTGGGGCCGAGGGACCTCGGTCATCGTCTCCTCA  332
D  91.7% (11/12)    IGHD2-2*01   19   ..G......-----------------------------------------------------  27
J  93.6% (44/47)    IGHJ6*02     16   ---------------.....................A.......A......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_248100

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           400     9e-114
IGHD5-12*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTAAACGAAA	ATAGTGGCTACGATTA	TGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTAAACGAAAATAGTGGCTACGATTATGCTGACTAC	ARLNENSGYDYADY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	272	16	0	94.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  A  S  Y 
                    Query_3288   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTGCCAGCTAC  91
V  94.4% (272/288)  IGHV1-18*04  7    ............................................................................C....A........  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  F  S  T  Y  N  G  D  T  N  Y  A  Q 
                    Query_3288   92   TCTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGTCTTGAGTGGATGGGACGGTTCAGCACTTACAATGGTGACACAAATTATGCACAG  181
V  94.4% (272/288)  IGHV1-18*04  97   GG.A...............................G...............T..A.....G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3288   182  AACCTCCAGGGCAGAGTCACCCTGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTTAGATCTGACGACACGGCC  271
V  94.4% (272/288)  IGHV1-18*04  187  ..G..................A.................................................G..................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                
                                       V  Y  Y  C  A  R  L  N  E  N  S  G  Y  D  Y  A  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3288   272  GTTTATTATTGTGCGAGATTAAACGAAAATAGTGGCTACGATTATGCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  357
V  94.4% (272/288)  IGHV1-18*04  277  ..G.....C.........--------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                     
D  100.0% (16/16)   IGHD5-12*01  7    ----------------------------................------------------------------------------  22
J  100.0% (39/39)   IGHJ4*02     8    -----------------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_248101

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           280     1e-77
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	CCTGTCCCGCGTTATGG	TTTTTGGAATGGTTATT	CCAAAATCTAACTCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCCTGTCCCGCGTTATGGTTTTTGGAATGGTTATTCCAAAATCTAACTCTTTCGACACC	ARGLSRVMVFGMVIPKSNSFDT	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	212	33	0	86.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  L  D  G  H  Y  W  T  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_3289   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGGTCGCTCGATGGTCACTACTGGACCTGGATACGCCAGGCCCCAGGGAAGGGTCTGGAG  90
V  86.5% (212/245)  IGHV4-34*01  49   ..................G......A.........CT..AG....T.........G......C......C.............G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  T  G  D  T  N  Y  N  S  S  L  K  S  R  V  G  L  S  V  D  T  S  R  N 
                    Query_3289   91   TGGATTGGGGAGATTTCTCATACTGGAGACACCAACTACAACTCGTCCCTCAAGAGTCGAGTCGGCTTGTCAGTTGACACGTCCAGGAAC  180
V  86.5% (212/245)  IGHV4-34*01  139  ...........A..CAA.....G....AG.............C....................AC.A.A.....A..........A....  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  T  S  L  T  G  A  D  T  G  V  Y  Y  C  A  R  G  L  S  R  V  M  V  F  G 
                    Query_3289   181  CAGTTCTCCCTGAAGTTGACCTCCCTGACCGGCGCGGACACGGGTGTCTATTACTGTGCGCGAGGCCTGTCCCGCGTTATGGTTTTTGGA  270
V  86.5% (212/245)  IGHV4-34*01  229  ...............C...G...TG......C...........C...G............A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  94.1% (16/17)    IGHD3-3*01   10   ----------------------------------------------------------------------------------........  17

                                      -IMGT--------------------------->                                  
                                       M  V  I  P  K  S  N  S  F  D  T  W  G  P  G  V  L  V  T  V  S  S  
                    Query_3289   271  ATGGTTATTCCAAAATCTAACTCTTTCGACACCTGGGGCCCGGGAGTCCTGGTTACCGTCTCCTCAG  337
D  94.1% (16/17)    IGHD3-3*01   18   G........----------------------------------------------------------  26
J  88.4% (38/43)    IGHJ5*02     9    ------------------------......C.........A....AC......C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_248102

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           357     1e-100
IGHD3-10*01                                                                                           12.2    37    
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTTAGCCACAAATAGTCCGA	GGAGTT	T	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATTTAGCCACAAATAGTCCGAGGAGTTTCTACTACGGTATGGACGTC	AKDLATNSPRSFYYGMDV	290	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	68	7	0	90.7
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	98	16	0	86
CDR3-IMGT (germline)	290	297	8	7	1	0	87.5
Total	N/A	N/A	296	262	34	0	88.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  H  S  G  G  E  G  K  K  P  G  A  S  V  T  V  S  C  K  S  S  G  H  T  F  T 
                    Query_3290   2    CAGATGCAGCTGGTGCACTCTGGAGGTGAGGGGAAGAAGCCTGGGGCCTCAGTGACGGTCTCCTGCAAGTCTTCTGGGCACACCTTTACC  91
V  88.5% (262/296)  IGHV1-18*04  1    ...G.T...........G.......C.....T.......................A.............G.......TT...........  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  Y  Y 
                    Query_3290   92   AGTTACGGCATCACCTGGGTGCGGCAGGCCCCTGGACAGGGCCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACATACTAT  181
V  88.5% (262/296)  IGHV1-18*04  91   ..C.....T....G.........A..............A..G.............................C......A.....A.....  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  M  V  R  D  R  V  T  M  T  R  N  T  S  T  S  T  V  H  M  E  V  R  G  L  P  S  D  D 
                    Query_3290   182  GCACAGATGGTCCGCGACAGAGTCACCATGACCAGGAATACATCCACGAGCACAGTCCACATGGAGGTGAGGGGCCTGCCATCTGACGAC  271
V  88.5% (262/296)  IGHV1-18*04  181  .......A.C...AG.G.................CAG.C................C.T........C.....A.....AG..........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  K  D  L  A  T  N  S  P  R  S  F  Y  Y  G  M  D  V  W  V  Q  G  T  S 
                    Query_3290   272  ACGGCCGTGTATTACTGTGCGAAAGATTTAGCCACAAATAGTCCGAGGAGTTTCTACTACGGTATGGACGTCTGGGTCCAAGGGACCTCA  361
V  88.5% (262/296)  IGHV1-18*04  271  ......................G...----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD3-10*01  18   ----------------------------------------------......--------------------------------------  23
J  94.1% (48/51)    IGHJ6*02     11   -----------------------------------------------------.......................G..........A.G  47

                                                    
                                       V  T  V  S  S
                    Query_3290   362  GTCACCGTCTCCTC  375
J  94.1% (48/51)    IGHJ6*02     48   ..............  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_248103

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_3291   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*01  49   .......................................AG..G.T..................................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  A  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_3291   91   TGGATTGGATATATCTATTACAGTGGGACCGCCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  93.0% (227/244)  IGHV4-59*01  139  ........G...................G.A...A............................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W 
                    Query_3291   181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGG  270
V  93.0% (227/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------------------------------------------....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_3291   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (35/35)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_248104

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           434     4e-124
IGHJ3*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ACCCTCGG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTCGGTGCTCTTGATATC	ARTLGALDI	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	283	5	0	98.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_3292   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTAT  91
V  98.3% (283/288)  IGHV1-18*01  7    ..........................................................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_3292   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAATTATGCACAG  181
V  98.3% (283/288)  IGHV1-18*01  97   ...................................G.........................C..................C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3292   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAACTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  98.3% (283/288)  IGHV1-18*01  187  ...C.......................................................G..............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------CDR3-IMGT-------->                                
                                       V  Y  Y  C  A  R  T  L  G  A  L  D  I  W  G  Q  G  A  M  V  T  V  S  S
                    Query_3292   272  GTGTATTACTGTGCGAGAACCCTCGGTGCTCTTGATATCTGGGGCCAAGGGGCAATGGTCACCGTCTCTTC  342
V  98.3% (283/288)  IGHV1-18*01  277  ..................-----------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                      
J  95.6% (43/45)    IGHJ3*02     4    --------------------------....T....................A...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_248105

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           366     2e-103
IGHD6-19*01                                                                                           27.6    8e-04 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	AG	ATAGCAGTGGCTGG	GACGGGCTGGGTAACTGGTAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGAAGATAGCAGTGGCTGGGACGGGCTGGGTAACTGGTATTACGGTATGGACGTC	TTEDSSGWDGLGNWYYGMDV	249	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	110	4	0	96.5
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	245	11	0	95.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3293   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTCAGTAACGCATGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.7% (245/256)  IGHV3-15*01  47   .......T............................C............C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  M  K  S  N  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  V  S  R  D  
                    Query_3293   91   AGTGGGTCGGCCGCATGAAAAGCAACACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCGTCTCAAGAGATG  180
V  95.7% (245/256)  IGHV3-15*01  137  .......T.....T..T........A...................................................A............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  K  M  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  E  D  S  S  G  
                    Query_3293   181  ATTCAAAAAAGATGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTATTGTACCACAGAAGATAGCAGTGGCT  270
V  95.7% (245/256)  IGHV3-15*01  227  ..........C.C...................................................C...........--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (14/14)   IGHD6-19*01  5    ------------------------------------------------------------------------------............  16

                                      ----CDR3-IMGT------------------------>                                 
                                      W  D  G  L  G  N  W  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3293   271  GGGACGGGCTGGGTAACTGGTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  100.0% (14/14)   IGHD6-19*01  17   ..---------------------------------------------------------------------  18
J  100.0% (48/48)   IGHJ6*02     15   -----------------------................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_248106

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD6-13*01                                                                                           12.2    36    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACAGACTAC	AALIAASHFTDY	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	103	11	0	90.4
CDR3-IMGT (germline)	290	292	3	3	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_3294   3    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCA  92
V  93.4% (271/290)  IGHV5-51*01  2    ....G.............................A...................................T...................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  V  P  G  Q  G  L  E  L  M  G  L  I  Y  P  G  D  S  D  T  W  Y  
                    Query_3294   93   CCTACTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCAAGGCCTGGAGTTGATGGGGCTCATCTATCCTGGTGACTCTGATACCTGGTACA  182
V  93.4% (271/290)  IGHV5-51*01  92   G.........................A........A............G.......A..........................A.A....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  T  S  A  Y  L  Q  W  T  T  L  K  A  S  D  
                    Query_3294   183  GTCCGTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCACCTCCGCCTACCTGCAGTGGACCACCCTGAAGGCCTCGGACA  272
V  93.4% (271/290)  IGHV5-51*01  182  .C......................C...................A...G.A..................G..G.................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3294   273  CCGCCATTTACTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACAGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  359
V  93.4% (271/290)  IGHV5-51*01  272  .......G..T.........-------------------------------------------------------------------  291
                                      T  A  M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    -------------------------...A.....-----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -----------------------------------------------.................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_240540

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           277     1e-76
IGHD2-15*01                                                                                           21.8    0.044
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATAGGC	AGTGGTGGTGGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATAGGCAGTGGTGGTGGCTGCTACTTTGACAGC	ARRLGSGVPCTPFRIGSGGGCYFDS	244	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	213	36	0	85.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  P  G  D  S  I  S  S  D  S  F  Y  W  A  W  I  R  Q  S  P  V  K  G 
                    Query_3295   1    ACCCTGTCCCTCACCTGCACTGTTCCCGGTGATTCCATCAGCAGTGACAGTTTCTACTGGGCCTGGATCCGCCAGTCCCCAGTGAAGGGA  90
V  85.5% (213/249)  IGHV4-39*02  49   .......................CT.T....GC............AGT....A........G.............C......G......G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  M  F  N  G  G  R  T  Y  S  N  P  S  L  K  N  R  V  T  I  S  A  D  T  S 
                    Query_3295   91   CTGGAGTGGATAGGGACTATGTTTAATGGTGGACGCACCTATTCCAACCCGTCCCTCAAGAATCGAGTCACCATATCTGCGGACACGTCC  180
V  85.5% (213/249)  IGHV4-39*02  139  ...........T....G...C.A.T..A....GA.......C.A.................G...............C.TA.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       R  N  H  F  S  L  R  L  T  Y  V  T  S  A  D  S  G  V  Y  Y  C  A  R  R  L  G  S  G  V  P 
                    Query_3295   181  AGGAACCACTTCTCCCTGAGGCTGACCTATGTGACCTCCGCAGACAGCGGTGTCTATTACTGTGCGAGACGTCTTGGGTCCGGTGTCCCC  270
V  85.5% (213/249)  IGHV4-39*02  229  .A.................A.....G..C.......G.........CG.C...G...............---------------------  297
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      ------CDR3-IMGT-------------------------------->                                 
                                       C  T  P  F  R  I  G  S  G  G  G  C  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_3295   271  TGTACTCCCTTCCGCATAGGCAGTGGTGGTGGCTGCTACTTTGACAGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  351
D  92.9% (13/14)    IGHD2-15*01  11   ---------------------.........A....----------------------------------------------  24
J  95.7% (44/46)    IGHJ4*02     2    -----------------------------------..........TA..................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_248108

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAGTTAT	CAGGGT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGGCTCCACCCC	ARSGSGSYQGWLHP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  P  Y  Y  W  I  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3296   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGTCCTTACTACTGGATCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.1% (223/242)  IGHV4-59*01  49   ..................A............G..........AG...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  H  I  F  Y  T  G  S  T  K  Y  K  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  K 
                    Query_3296   91   TGGCTTGGCCATATCTTTTACACTGGGAGCACCAAATACAAGCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCCAGGAAG  180
V  92.1% (223/242)  IGHV4-59*01  139  ...A....GT......A.....G............C.....C..........................A...G............A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  S  Y  Q  G  W 
                    Query_3296   181  CAGTTCTCCCTGAAACTGCGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGG  270
V  92.1% (223/242)  IGHV4-59*01  229  ..............G...A.C.........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (15/15)   IGHD3-10*01  11   ------------------------------------------------------------------...............---------  25
J  87.0% (40/46)    IGHJ5*02     6    ---------------------------------------------------------------------------------------...  8

                                      -------->                                  
                                       L  H  P  W  G  L  G  R  L  V  I  V  S  S  
                    Query_3296   271  CTCCACCCCTGGGGCCTGGGAAGACTGGTCATCGTCTCCTCAG  313
J  87.0% (40/46)    IGHJ5*02     9    T..G............A.....CC.......C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_324718

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         360     1e-101
IGHD5-18*01                                                                                           14.1    8.6   
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GAAG	ACAGATATGG	GGGACTTTGGACCTGCAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAAGACAGATATGGGGGACTTTGGACCTGCATTACTTTGACTTC	ARGRQIWGTLDLHYFDF	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_3297     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  F  Y  N  T  E  T  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  D  R  S 
                    Query_3297     91   CTGGAGTGGATTGGATACTTCTATAATACTGAGACCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCACTAGACAGGTCC  180
V  96.0% (240/250)  IGHV4-30-2*01  139  ..............G...A.....C...G..G..G.......................A...................G...........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  Q  I  W  G  T 
                    Query_3297     181  AAGAACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAAGACAGATATGGGGGACT  270
V  96.0% (240/250)  IGHV4-30-2*01  229  ...................A......C...........................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD5-18*01    7    --------------------------------------------------------------------------....C.....------  16

                                        MGT-------------------->                                  
                                         L  D  L  H  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3297     271  TTGGACCTGCATTACTTTGACTTCTGGGGCCAGGGCACCCTCGTCACCGTCTCCTCAG  328
J  93.5% (43/46)    IGHJ4*02       3    ------------..........A............A.....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_139

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           339     2e-95
IGHD3-22*01                                                                                           25.7    0.003
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAG	GCG	ATTATTATGATAGCAGTGATTA	C	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGGCGATTATTATGATAGCAGTGATTACGATGCTTTTGATATC	TRGDYYDSSDYDAFDI	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	236	19	0	92.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3298   1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.5% (236/255)  IGHV3-49*04  47   .........................................................G................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  A  F  I  S  S  K  A  Y  G  D  K  T  Q  H  A  A  S  V  K  G  R  F  T  I  P  R  D  
                    Query_3298   91   AATGGGTAGCTTTCATTAGCAGCAAGGCTTATGGTGACAAAACACAACACGCCGCGTCTGTGAAGGGCCGATTCACCATCCCAAGAGATG  180
V  92.5% (236/255)  IGHV3-49*04  137  .G.......G.........A.....A..........GG.C....G..T................A...A...........T.........  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  K  S  I  A  Y  L  E  M  K  S  L  R  T  E  D  T  A  I  Y  Y  C  T  R  G  D  Y  Y  D  
                    Query_3298   181  ATTCCAAAAGCATCGCCTATCTGGAAATGAAAAGCCTGAGAACCGAGGACACAGCCATATATTATTGTACTAGAGGCGATTATTATGATA  270
V  92.5% (236/255)  IGHV3-49*04  227  .......................C.......C.......A................G.G.....C..........---------------  301
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  86.4% (19/22)    IGHD3-22*01  3    ------------------------------------------------------------------------------....C.......  14

                                      R3-IMGT------------------>                                  
                                      S  S  D  Y  D  A  F  D  I  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_3298   271  GCAGTGATTACGATGCTTTTGATATCTGGGGCCAAGGGACAAGGGTCACCGTCTCTTCAG  330
D  86.4% (19/22)    IGHD3-22*01  15   .T....G...--------------------------------------------------  24
J  98.0% (48/49)    IGHJ3*02     2    -----------...............................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_324710

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           380     1e-107
IGHD6-19*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAG	GGGCG	GCAGTGACTGGTAC	GTTGG	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CCTAGAGGGGCGGCAGTGACTGGTACGTTGGTTGGCTAC	PRGAAVTGTLVGY	249	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	255	7	6	1	0	85.7
Total	N/A	N/A	255	249	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3299   1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.6% (249/255)  IGHV3-49*04  47   ..........................................................................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  A  E  Y  A  A  S  V  K  G  R  F  T  N  S  R  D  
                    Query_3299   91   AGTGGGTAGGCTTCATTAGAAGCAAAGCTTATGGTGGGACAGCAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCAACTCAAGAGATG  180
V  97.6% (249/255)  IGHV3-49*04  137  ..........T..............................A....................................T...........  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  P  R  G  A  A  V  T  
                    Query_3299   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAAGCGAGGACACAGCCGTGTATTACTGCCCTAGAGGGGCGGCAGTGACTG  270
V  97.6% (249/255)  IGHV3-49*04  227  ..........................................C........................TA......---------------  301
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  92.9% (13/14)    IGHD6-19*01  8    --------------------------------------------------------------------------------......G...  17

                                      GT-------------->                                  
                                      G  T  L  V  G  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_3299   271  GTACGTTGGTTGGCTACTGGGGCCAGGGAACCCTGGTCCCCGTATCCTCAG  321
D  92.9% (13/14)    IGHD6-19*01  18   ....-----------------------------------------------  21
J  92.9% (39/42)    IGHJ4*02     7    ---------...A.........................A....C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_324711

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_3300   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  V  S  V  D  T  S  K  S 
                    Query_3300   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCGTTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T....A.A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  I  S  L  S  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_3300   181  CAGATCTCCCTGAGCCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ...T.........AG........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_3300   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_324712

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           27.6    9e-04 
IGHJ6*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACTTC	ARHGDDSGSYLYYFYGMDF	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	105	9	0	92.1
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	280	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  V  S  C  K  A  S  G  Y  S  F  T  
                    Query_3301   2    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGGTCTCCTGTAAGGCTTCTGGATACAGCTTTACCA  91
V  94.9% (280/295)  IGHV5-51*01  2    ....G...................................................A............G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  T  R  Y  
                    Query_3301   92   ATTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATACCAGATACA  181
V  94.9% (280/295)  IGHV5-51*01  92   GC...........................................................C............................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  R  S  R  R  A  S  D  
                    Query_3301   182  GCCCGTCTTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTATTTGCAGTGGAGGAGCCGGAGGGCCTCGGACA  271
V  94.9% (280/295)  IGHV5-51*01  182  .......C...C..............................................CC..........C....T..A...........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  F  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  F  W  G  P  G   T 
                    Query_3301   272  CCGCCATATATTTCTGTGCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACTTCTGGGGCCCGGGGA-CA  360
V  94.9% (280/295)  IGHV5-51*01  272  .......G....A............-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (14/14)   IGHD1-26*01  4    ---------------------------------..............-------------------------------------------  17
J  89.5% (51/57)    IGHJ6*02     6    --------------------------------------------------.......A......T......G.........AA....C..  45

                                                       
                                       R  S  P  S  P   
                    Query_3301   361  CGGTCACCGTCTCCTCA  377
J  89.5% (51/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_324714

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGCCCTACTTATTATGCCAA	TAGTGGTT	CAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCCCTACTTATTATGCCAATAGTGGTTCAGACTTTGACTAC	ARGGPTYYANSGSDFDY	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  Y  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3302   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGCAGCTACTACATGAGCTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  94.3% (232/246)  IGHV3-53*01  47   ...........................................T...A.........................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  H  S  A  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_3302   91   AGTGGGTCTCAGTTATTCATAGCGCTGGAAGTACATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.3% (232/246)  IGHV3-53*01  137  .................T......G...T..C.....C..C.................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------------CDR3-IMGT-
                                      N  T  L  N  L  Q  M  N  S  L  R  V  Q  D  T  A  V  Y  Y  C  A  R  G  G  P  T  Y  Y  A  N  
                    Query_3302   181  ACACGCTAAATCTTCAAATGAACAGCCTGAGAGTCCAGGACACGGCCGTGTATTATTGTGCGAGAGGAGGCCCTACTTATTATGCCAATA  270
V  94.3% (232/246)  IGHV3-53*01  227  .......GT........................C.G...................C..........------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-22*01  16   ----------------------------------------------------------------------------------------..  17

                                      ------------------->                                  
                                      S  G  S  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3302   271  GTGGTTCAGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (8/8)     IGHD3-22*01  18   ......------------------------------------------------  23
J  100.0% (45/45)   IGHJ4*02     4    ---------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_324715

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           413     2e-117
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	275	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_3303   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  96.2% (275/286)  IGHV5-51*01  6    ..................................................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_3303   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  96.2% (275/286)  IGHV5-51*01  96   ......................A.......G.............G..........................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  G  T  L  K  A  S  D  T  A
                    Query_3303   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAGCACCGCCTACCTGCAGTGGGGCACCCTGAAGGCCTCGGACACCGC  270
V  96.2% (275/286)  IGHV5-51*01  186  ....................C...................A.......................A...G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3303   271  CGTGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.2% (275/286)  IGHV5-51*01  276  .A..............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_324717

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           417     6e-119
IGHD3-3*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCAACCTGACTC	TTTTGGAGTGGTTAT	CTC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGGCAACCTGACTCTTTTGGAGTGGTTATCTCCTTTGACAAC	TRGQPDSFGVVISFDN	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  N  F  S  G  Y 
                    Query_3304   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAACTTTAGCGGCTAT  91
V  96.2% (278/289)  IGHV1-18*01  7    ............................................................................C.....C.A.....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  T  G  Y  N  G  K  R  N  Y  A  Q 
                    Query_3304   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCACCGGTTACAATGGTAAAAGAAACTATGCACAG  181
V  96.2% (278/289)  IGHV1-18*01  97   ..................................................A.......G..C............C.C.............  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  D  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3304   182  AATCTCCAGGACAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.2% (278/289)  IGHV1-18*01  187  ..G.......G...............................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  T  R  G  Q  P  D  S  F  G  V  V  I  S  F  D  N  W  G  Q  G  T  L  V  T  V  S 
                    Query_3304   272  GTGTATTACTGTACGAGAGGGCAACCTGACTCTTTTGGAGTGGTTATCTCCTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  361
V  96.2% (278/289)  IGHV1-18*01  277  ............G......-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (15/15)   IGHD3-3*01   11   --------------------------------...............-------------------------------------------  25
J  97.7% (43/44)    IGHJ4*02     5    --------------------------------------------------.......T................................  44

                                          
                                       S  
                    Query_3304   362  TCAG  365
J  97.7% (43/44)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_185498

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           361     4e-102
IGHD1-7*01                                                                                            16.1    2.2   
IGHJ2*01                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-7*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TCTCAGGGAGTCGG	GGAACTAC	GGAG	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTCTCAGGGAGTCGGGGAACTACGGAGTGGTACTTCGATCTC	ARVSGSRGTTEWYFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3305   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACTTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-74*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  M  K  S  D  G  S  S  T  S  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  A  
                    Query_3305   91   TGTGGGTCTCACGTATGAAAAGCGATGGAAGTAGCACAAGCTACGCGGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (240/249)  IGHV3-74*01  137  ................T..T..T.....G...........................A.................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  S  G  S  R  G  T  
                    Query_3305   181  GGAACACGTTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGTCTCAGGGAGTCGGGGAACTA  270
V  96.4% (240/249)  IGHV3-74*01  227  A.......C............................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-7*01   10   -----------------------------------------------------------------------------------.......  16

                                      T------------------>                                  
                                      T  E  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3305   271  CGGAGTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  100.0% (8/8)     IGHD1-7*01   17   .-----------------------------------------------------  17
J  100.0% (49/49)   IGHJ2*01     5    -----.................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_240602

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           324     8e-91
IGHD1-26*01                                                                                           14.1    8.3  
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGAGACCG	GCTACTA	N/A	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGAGACCGGCTACTATGAAGCTTTTGATCTC	ARGETGYYEAFDL	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  L  S  R  Y  D  A  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3306   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCCGGAATCACCCTCAGTAGATATGACGCCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-33*01  47   ............................T...T.....T.......C....G.ATG..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  M  S  Y  D  G  T  N  K  Y  Y  G  D  S  V  K  G  R  F  I  I  S  R  D  N  S  
                    Query_3306   91   AGTGGGTGGCAGTTATGTCGTATGATGGAACTAATAAATATTATGGAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAACTCCA  180
V  91.6% (228/249)  IGHV3-33*01  137  ................A.G...........G.........C....C.......................C...............T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  M  F  L  E  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  G  E  T  G  Y  Y  E  
                    Query_3306   181  AGAACACGATGTTTCTAGAAATGAACAGCCTGAGAGGCGAGGACACGGCTGTGTATTATTGTGCGAGAGGGGAGACCGGCTACTATGAAG  270
V  91.6% (228/249)  IGHV3-33*01  227  ........C...A...GC..................C.....................C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  13   ------------------------------------------------------------------------------.......-----  19
J  92.0% (46/50)    IGHJ3*01     1    -------------------------------------------------------------------------------------...T.  5

                                      ---------->                                  
                                      A  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3306   271  CTTTTGATCTCTGGGGGCAAGGGACACTGGTCACCGTCTCTTCAG  315
J  92.0% (46/50)    IGHJ3*01     6    ........G.......C.........A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_130188

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     6e-98
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCTAGGAGATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCTAGGAGATCTTGACTAC	ASLGDLDY	238	261	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	232	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  R  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  Q 
                    Query_3307   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCGTTACTTCTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGCAG  90
V  95.9% (232/242)  IGHV4-59*01  49   ..........................................A......A.....G...............................G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  T  S  Q  N 
                    Query_3307   91   TGGATTGGATATATCTCTTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTGGACACGTCCCAGAAC  180
V  95.9% (232/242)  IGHV4-59*01  139  ........G.......A...C..........................................A..........A.........A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------CDR3-IMGT------>         
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  G  D  L  D  Y  W  G  Q 
                    Query_3307   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGTCTAGGAGATCTTGACTACTGGGGCCAG  270
V  95.9% (232/242)  IGHV4-59*01  229  ..............................................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------.................  23

                                                               
                                       G  T  L  V  T  V  S  S  
                    Query_3307   271  GGAACCCTGGTCACCGTCTCCTCAG  295
J  100.0% (42/42)   IGHJ4*02     24   .........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_130186

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           322     2e-90
IGHD1-20*01                                                                                           10.3    124  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TCCCAC	TATAA	ATACCATGCCGTGGCCACTACCGCGG	TTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATCCCACTATAAATACCATGCCGTGGCCACTACCGCGGTTGAATAC	AKSHYKYHAVATTAVEY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  G  Y  V  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3308   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCAATGGCTATGTCATGTCCTGGGTCCGCCAGGCTCCGGGCAAGGGGCTGG  90
V  91.5% (227/248)  IGHV3-30*18  47   ............................T.............G.A......G....CA..................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  I  I  S  Y  D  G  R  S  K  F  H  G  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_3308   91   AGTGGGTGTCAATTATATCATATGATGGAAGGAGCAAATTCCATGGAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAACTCCA  180
V  91.5% (227/248)  IGHV3-30*18  137  ........G..G...................T.AT....A.T...C.........................A.............T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A  K  S  H  Y  K  Y  H  A  
                    Query_3308   181  GGAACACGCTGTATCTGCAAATGAACAGCCTGAGAACTGAGGACACGGCTTTATATTACTGTGCGAAATCCCACTATAAATACCATGCCG  270
V  91.5% (227/248)  IGHV3-30*18  227  A..................................G..............G.G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD1-20*01  3    --------------------------------------------------------------------------.....-----------  7

                                      GT-------------------->                                  
                                      V  A  T  T  A  V  E  Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_3308   271  TGGCCACTACCGCGGTTGAATACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  327
J  95.2% (40/42)    IGHJ4*02     7    ---------------....C..........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_130187

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           360     1e-101
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CAC	TATTCCTATGGTTCGAGGAGT	GC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACACTATTCCTATGGTTCGAGGAGTGCTTGACTTT	AKDTIPMVRGVLDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  S  S  H  A  M  S  W  A  R  Q  A  P  G  K  G  L  
                    Query_3309   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTAGCAGCCATGCCATGAGCTGGGCCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-23*01  47   ................................T..............T...............T..........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3309   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGGGGCACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  96.0% (240/250)  IGHV3-23*01  137  ............................T..T.G...................................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  H  M  S  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  D  T  I  P  M  V  R  
                    Query_3309   181  AGAACACGCTGTATCTGCACATGAGCAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGACACTATTCCTATGGTTCGAG  270
V  96.0% (240/250)  IGHV3-23*01  227  ...................A....A.........................G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.5% (19/21)    IGHD3-10*01  2    -------------------------------------------------------------------------....A..........G.  18

                                      ------------->                                  
                                      G  V  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3309   271  GAGTGCTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  90.5% (19/21)    IGHD3-10*01  19   ....--------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    ------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_130184

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3310   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ........................................G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_3310   91   TGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  ........G...A..T...............................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  V  G  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y 
                    Query_3310   181  CAGTTCTCCCTGAAGGTGGGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTAC  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............C..A.C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  A  S  S  
                    Query_3310   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGCCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    ..................................T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_130185

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           321     7e-90
IGHD3-16*01                                                                                           12.2    32   
IGHJ2*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGCCG	TGGGGG	CATCAAGGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGCCGTGGGGGCATCAAGGGATCCTGGTACTCCGATCTC	ARVRRGGIKGSWYSDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3311   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGACATGAGATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.2% (227/249)  IGHV3-48*03  47   ..............................................TT....A.....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  T  G  S  T  L  I  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3311   91   AGTGGGTTTCACACATTTCCACTGGTAGTACTCTTATACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  91.2% (227/249)  IGHV3-48*03  137  ...........T.....AGT.G.A..G...G.ACC...T..................................................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  V  R  R  G  G  I  K  
                    Query_3311   181  AGAATTCTCTCTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGAGAGTCCGCCGTGGGGGCATCAAGG  270
V  91.2% (227/249)  IGHV3-48*03  227  ....C..A..G.....G.................................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------------......--------  22

                                      T------------------>                                  
                                      G  S  W  Y  S  D  L  W  G  R  G  T  L  V  T  V  S  P  
                    Query_3311   271  GATCCTGGTACTCCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCCCAG  324
J  96.0% (48/50)    IGHJ2*01     4    ----........T.....................................T...  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_185490

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           360     1e-101
IGHD2-2*01                                                                                            18.0    0.68  
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CC	ATTGTAGTA	AGACCGATTGTCATTTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCATTGTAGTAAGACCGATTGTCATTTTTACTTCTACTATAGTATGGACGTC	ASHCSKTDCHFYFYYSMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	259	29	0	89.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  G  T  F  S  N  F
                    Query_3312   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAACTT  90
V  89.9% (259/288)  IGHV1-69*01  6    ..................G...............................A...................................G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  L  F  G  T  T  N  Y  A  Q
                    Query_3312   91   TGGTATCAGTTGGGTGCGCCAGGCCCCGGGACAAGGACTTGAGTGGATGGGAGGGATCATCCCTCTGTTCGGAACAACAAACTACGCACA  180
V  89.9% (259/288)  IGHV1-69*01  96   ..C......C........A........T........G...........................A.C..T..T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  S  I  T  A  D  E  S  R  D  A  A  Y  L  E  L  S  R  L  K  P  E  D  T  A
                    Query_3312   181  GAAGTTCCAGGGCAGAGTCTCGATTACCGCGGACGAATCCAGGGACGCGGCCTATTTGGAGCTGAGTAGGCTGAAACCGGAAGACACGGC  270
V  89.9% (259/288)  IGHV1-69*01  186  ...................A.....................C.AG.A.A.....CA..........C..C....G.T.T..G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        V  Y  Y  C  A  S  H  C  S  K  T  D  C  H  F  Y  F  Y  Y  S  M  D  V  W  G  Q  G  T  T  V
                    Query_3312   271  CGTGTATTATTGTGCGAGCCATTGTAGTAAGACCGATTGTCATTTTTACTTCTACTATAGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  89.9% (259/288)  IGHV1-69*01  276  .........C........------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  100.0% (9/9)     IGHD2-2*01   6    --------------------.........-------------------------------------------------------------  14
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------....A......CG...............................  49

                                                   
                                        T  V  S  S 
                    Query_3312   361  CACCGTCTCCTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_130183

Length=426
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           358     5e-101
IGHD2-2*01                                                                                            18.0    0.73  
IGHJ6*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGAGCCGCCCCCCCTGGG	GGATATTATGGTTGTCCCAGACGCTAT	TGATGTAC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGAGCCGCCCCCCCTGGGGGATATTATGGTTGTCCCAGACGCTATTGATGTACACTACTACAAAGGTGTGGACGTC	ARGEPPPLGDIMVVPDAIDVHYYKGVDV	284	367	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	64	5	0	92.8
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	95	19	0	83.3
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	259	30	0	89.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  V  V  R  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_3313   2    CAGCTGGTGCAGTCTGGAGGTGTGGTGAGGAAGCCGGGGGCCTCAGTGAAGGTCTCTTGCAAGGCTTCTGGTTACACCTTTACCAGTTAT  91
V  89.6% (259/289)  IGHV1-18*01  7    ...................C..A.....A......T....................C.............................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  L  C  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  N  T  Y  Y  T  P 
                    Query_3313   92   GGTCTCTGCTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACCTATTACACACCG  181
V  89.6% (259/289)  IGHV1-18*01  97   ...A..A.........................A...........................G................AA.C..TG...A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  A  S  M  T  I  E  T  S  M  R  T  A  Y  M  E  L  R  S  L  G  L  D  D  T  A 
                    Query_3313   182  AAGTTCCAGGGCAGAGCCTCCATGACCATAGAGACATCCATGAGGACAGCCTACATGGAACTGAGGAGCCTGGGGCTTGACGACACGGCC  271
V  89.6% (259/289)  IGHV1-18*01  187  ...C............T.A.........C...C.......C...C..............G............A.ATC.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------------------CDR3-IMGT-------------------------------
                                       V  Y  Y  C  A  R  G  E  P  P  P  L  G  D  I  M  V  V  P  D  A  I  D  V  H  Y  Y  K  G  V 
                    Query_3313   272  GTCTATTATTGTGCGAGAGGGGAGCCGCCCCCCCTGGGGGATATTATGGTTGTCCCAGACGCTATTGATGTACACTACTACAAAGGTGTG  361
V  89.6% (259/289)  IGHV1-18*01  277  ..G.....C..........-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  77.8% (21/27)    IGHD2-2*01   2    --------------------------------------.......G.A..A..A....CT.....-------------------------  28
J  94.6% (53/56)    IGHJ6*02     7    -------------------------------------------------------------------------........T.C...A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3313   362  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  400
J  94.6% (53/56)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41866416


Query= Query_130181

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     9e-99
IGHD4-4*01                                                                                            21.8    0.044
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-4*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAGGCGGGG	GACTACAGTAA	TTGGGGGGGGCTGGACTACCCAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAGGCGGGGGACTACAGTAATTGGGGGGGGCTGGACTACCCAGACTACGGTATGGACGTC	AKDKAGDYSNWGGLDYPDYGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  T  L  T  T  Y  A  M  S  W  V  R  L  G  P  G  K  R  L  
                    Query_3314   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAGTCACTCTTACCACCTATGCCATGAGCTGGGTCCGCCTGGGTCCAGGGAAGCGGCTGG  90
V  94.8% (237/250)  IGHV3-23*01  47   ................................T....CT...G..G.......................A..C..........G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  N  D  V  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3314   91   AATGGGTCTCAGGTATTAGTGGTAATGATGTTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (237/250)  IGHV3-23*01  137  .G..........C...........G..G..G...........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  K  A  G  D  Y  S  
                    Query_3314   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATAAGGCGGGGGACTACAGTA  270
V  94.8% (237/250)  IGHV3-23*01  227  ......................................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD4-4*01   2    --------------------------------------------------------------------------------..........  11

                                      --CDR3-IMGT----------------------------->                                 
                                      N  W  G  G  L  D  Y  P  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3314   271  ATTGGGGGGGGCTGGACTACCCAGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
D  100.0% (11/11)   IGHD4-4*01   12   .-------------------------------------------------------------------------  12
J  100.0% (50/50)   IGHJ6*02     13   ------------------------..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_120232

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            291     6e-81
IGHD2-21*01                                                                                           18.0    0.60 
IGHJ3*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-21*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CAGGAATAACAAGTT	TGGTGATGATCGCTA	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGGGACAGGAATAACAAGTTTGGTGATGATCGCTACTATGATGTATTTGATTTG	TRDRNNKFGDDRYYDVFDL	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  T  Y  W  M  A  W  I  R  Q  A  P  G  K  G  L  
                    Query_3315   1    GGTCCCTGAGACTCTCCTGTGCTGCCTCAGGTTTCACCTTTGGCACCTATTGGATGGCATGGATCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  87.2% (218/250)  IGHV3-7*01   47   ......................A.....T..A.........A.T.G..........AGC...G......................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  G  D  G  S  K  T  Y  Y  V  D  S  V  K  G  R  F  T  I  D  R  D  N  A  
                    Query_3315   91   AGTGGGTGGCCAATATAAAAGGAGATGGAAGTAAGACATACTATGTGGATTCTGTGAAGGGCCGCTTCACTATTGACAGAGACAATGCCA  180
V  87.2% (218/250)  IGHV3-7*01   137  .............C.....GCA..........G...A............C..............A.....C..CTC.........C....  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  F  Y  Y  C  T  R  D  R  N  N  K  F  G  
                    Query_3315   181  GGAACTCACTGTATCTGCAAATGAACAGCCTCAGAGTCGAGGACACGGCTTTTTATTACTGCACGAGGGACAGGAATAACAAGTTTGGTG  270
V  87.2% (218/250)  IGHV3-7*01   227  A..............................G....C.............G.G........TG....A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD2-21*01  10   -------------------------------------------------------------------------------------.....  14

                                      -IMGT----------------------->                                
                                      D  D  R  Y  Y  D  V  F  D  L  W  G  Q  G  T  M  V  T  V  S  S
                    Query_3315   271  ATGATCGCTACTATGATGTATTTGATTTGTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  331
D  86.7% (13/15)    IGHD2-21*01  15   G....T....---------------------------------------------------  24
J  91.7% (44/48)    IGHJ3*01     1    -------------.....CT......G.C................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_109579

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           218     6e-59
IGHD3-3*01                                                                                            23.8    0.010
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTCTTTAATG	ACGATTATTGGAGTG	ATGATTTTCGTCGACACCTAGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCTTTAATGACGATTATTGGAGTGATGATTTTCGTCGACACCTAGGGCTTGACAAC	ARHVFNDDYWSDDFRRHLGLDN	215	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR2-IMGT	58	79	22	20	2	0	90.9
CDR2-IMGT	80	100	21	20	1	0	95.2
FR3-IMGT	101	214	114	104	10	0	91.2
CDR3-IMGT (germline)	215	222	8	8	0	0	100
Total	N/A	N/A	165	152	13	0	92.1


Alignments

                                      <------FR2-IMGT------><-----CDR2-IMGT-----><----------------------------------------------
                                        G  L  E  W  I  G  N  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  H  T
                    Query_3316   58   GGGGCTGGAGTGGATTGGAAATATCTATTATAGTGGGACCACCTACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCCGTGCACAC  147
V  92.1% (152/165)  IGHV4-39*01  135  ..................G.G.................G...............G.......................A.....AG....  224
                                        G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T

                                      ------FR3-IMGT----------------------------------------------------><----------------------
                                        S  K  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  H  V  F  N  D  D
                    Query_3316   148  GTCCAAGAATCAGTTCTCCCTGAGGCTGAATTCTGTGACCGCCGCAGACTCGGCTGTATATTACTGTGCGAGACATGTCTTTAATGACGA  237
V  92.1% (152/165)  IGHV4-39*01  225  .........C.............A.....GC..................A.......G.................---------------  299
                                        S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                  
D  93.3% (14/15)    IGHD3-3*01   6    --------------------------------------------------------------------------------------....  9

                                      ------CDR3-IMGT--------------------------->                                  
                                        Y  W  S  D  D  F  R  R  H  L  G  L  D  N  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_3316   238  TTATTGGAGTGATGATTTTCGTCGACACCTAGGGCTTGACAACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  314
D  93.3% (14/15)    IGHD3-3*01   10   ..T........------------------------------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------.....T........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_109578

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD7-27*01                                                                                           14.1    8.3   
IGHJ5*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCA	AACTGGG	AACTCAATGT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGACGTCAAACTGGGAACTCAATGTACAACTGGTTCGACCCC	SRRQTGNSMYNWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3317   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.9% (238/243)  IGHV4-59*01  49   .......................................................G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  I  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3317   91   TGGATTGGATATATCTATTACAGTGGGAGCACCAACTACATCCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  ........G...............................A.................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  R  R  Q  T  G  N  S  M  Y  N 
                    Query_3317   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTTCGAGACGTCAAACTGGGAACTCAATGTACAAC  270
V  97.9% (238/243)  IGHV4-59*01  229  .............A...........................................G.....---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD7-27*01  3    --------------------------------------------------------------------.......---------------  9
J  98.0% (50/51)    IGHJ5*02     1    -------------------------------------------------------------------------------------.....  5

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_3317   271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  316
J  98.0% (50/51)    IGHJ5*02     6    .................................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_20203

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           266     2e-73
IGHD2-15*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	TCTAC	GGATATACTAGTGG	GGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATCTACGGATATACTAGTGGGGGC	AIYGYTSGG	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	12	12	0	50
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	208	38	0	84.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  D  F  S  R  Y  S  V  S  W  I  R  Q  S  P  G  K  G  L  
                    Query_3318   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGTTTAGACTTCAGTAGATATAGTGTGAGCTGGATCCGCCAGTCTCCAGGGAAGGGCCTGG  90
V  84.6% (208/246)  IGHV3-21*01  47   .........................C.....A..CAC.........C.....CA...A....G........G.............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  A  N  G  K  F  D  Y  Y  V  D  S  V  R  G  R  F  T  I  T  R  D  N  A  
                    Query_3318   91   AGTGGGTCTCATCCATCAGTGCTAATGGGAAATTCGACTACTATGTAGACTCAGTGAGGGGCCGATTCACCATCACCAGAGACAACGCCA  180
V  84.6% (208/246)  IGHV3-21*01  137  ................T...AG..G.A.T.GT.A.ATA.....C.C...........A................T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  G  V  F  S  C  A  I  Y  G  Y  T  S  G  G  
                    Query_3318   181  AGAACTCAGTTTATCTGCAGATGAACAGCCTGAGGGCCGAAGACACGGGTGTTTTTTCTTGTGCGATCTACGGATATACTAGTGGGGGCT  270
V  84.6% (208/246)  IGHV3-21*01  227  ........C.G........A..............A.....G.......C...G.A..AC.......------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  85.7% (12/14)    IGHD2-15*01  2    -----------------------------------------------------------------------......TG......-----  15
J  97.1% (34/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------------..  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3318   271  GGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  303
J  97.1% (34/35)    IGHJ4*02     16   .............C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_261425

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           344     6e-97
IGHD6-13*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGTGGTGT	CAGCAGCTGGTAC	GGGCCGGCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTGGTGTCAGCAGCTGGTACGGGCCGGCCGACTAC	ARGGGVSSWYGPADY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  V  T  R  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3319   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGCTCACCGTCACTAGGAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.7% (233/246)  IGHV3-53*01  47   ................................T.........G...C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  T  G  G  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  S  S  K  
                    Query_3319   91   AGTGGGTCTCAGTTATTTATACCGGTGGAAGCACATACTATTCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  94.7% (233/246)  IGHV3-53*01  137  .....................G......T...........CG.......................................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------CDR3-IMGT----
                                      N  T  L  L  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  G  V  S  S  W  Y  
                    Query_3319   181  ACACACTACTTCTTCAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGGGGGTGGTGTCAGCAGCTGGTACG  270
V  94.7% (233/246)  IGHV3-53*01  227  ....G..GTA......A.................................................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (13/13)   IGHD6-13*01  9    ----------------------------------------------------------------------------.............-  21

                                      ------------->                                  
                                      G  P  A  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3319   271  GGCCGGCCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (40/40)   IGHJ4*02     9    --------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_109573

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD3-22*01                                                                                           25.7    0.003
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGC	AGTAGTGGTTATT	GG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTCGACCCC	ARGGSSGYWWFDP	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	227	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  G  Y  Y  R  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_3320   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCATCAGTGGTTATTACCGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.4% (227/243)  IGHV4-59*01  50   .....TCC...A....C.............G..........A....C...T...G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  F  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  K  N  
                    Query_3320   94   GGATTGGGTTTATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGGGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  93.4% (227/243)  IGHV4-59*01  140  .........A.........C.................................A....................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  S  S  G  Y  W  W  F  
                    Query_3320   184  AGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTCG  273
V  93.4% (227/243)  IGHV4-59*01  230  ..............C...G.................................C..........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (13/13)   IGHD3-22*01  14   --------------------------------------------------------------------.............---------  26
J  93.5% (43/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  A  I  P  V  T  V  S  S  
                    Query_3320   274  ACCCCTGGGGCCAGGCAATCCCGGTCACCGTCTCCTCAG  312
J  93.5% (43/46)    IGHJ5*02     13   ...............G..C..T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_109572

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            260     1e-71
IGHD3-10*01                                                                                           12.2    32   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	22	5	0	81.5
FR2-IMGT	57	107	51	48	3	0	94.1
CDR2-IMGT	108	128	21	14	7	0	66.7
FR3-IMGT	129	242	114	96	18	0	84.2
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	207	41	0	83.5


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_3321   1    GGTCCCTGAGACTCTCCTGTACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGC  90
V  83.5% (207/248)  IGHV4-4*01   47   ..A.....TCC...A....CG.........G...........G..GT.....C..........................A..........  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  S  M  S  V  D  K  S  
                    Query_3321   91   TGGAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCAGCATGTCAGTAGACAAGTCCA  180
V  83.5% (207/248)  IGHV4-4*01   137  ....G...........A.........A.T..GAG.AC.......AAC...T.....A............C...A................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  T  L  T  S  L  N  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  
                    Query_3321   181  AGAATCAATTCTCCCTCACGCTGACGTCTCTGAACGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTC  270
V  83.5% (207/248)  IGHV4-4*01   227  ....C..G........G.A.....GC...G...C..................G....G...T...A..----------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01  14   ----------------------------------------------------------------------------------------..  15

                                      ------------->                                  
                                      R  G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_3321   271  GGGGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  318
D  100.0% (6/6)     IGHD3-10*01  16   ....--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    -----.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_109571

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            366     2e-103
IGHD3-16*01                                                                                           18.0    0.62  
IGHJ6*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TTTCCCCCCAAA	ATGATTACG	GGGACAACGCCGAGCCTTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATATTTCCCCCCAAAATGATTACGGGGACAACGCCGAGCCTTCCTACTATGGTAGGGCCGTC	AKDISPQNDYGDNAEPSYYGRAV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	252	10	10	0	0	100
Total	N/A	N/A	252	243	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  D  Y  A  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_3322   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGGTGACTATGCCATGTACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.4% (243/252)  IGHV3-9*01   47   ..........................................A...T.........C.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  T  W  H  S  G  T  V  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3322   91   AGTGGGTCTCAGGTATTACTTGGCATAGTGGTACAGTAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (243/252)  IGHV3-9*01   137  ..................G....A.........GCA......................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  S  E  D  T  A  L  Y  Y  C  A  K  D  I  S  P  Q  N  D  
                    Query_3322   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGATCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATATTTCCCCCCAAAATGATT  270
V  96.4% (243/252)  IGHV3-9*01   227  ...................................G....................................------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (9/9)     IGHD3-16*01  6    ------------------------------------------------------------------------------------......  11

                                      --CDR3-IMGT----------------------------->                                 
                                      Y  G  D  N  A  E  P  S  Y  Y  G  R  A  V  G  G  Q  G  P  T  V  I  V  S  S 
                    Query_3322   271  ACGGGGACAACGCCGAGCCTTCCTACTATGGTAGGGCCGTCGGGGGCCAAGGGCCCACGGTCATCGTCTCCTCA  344
D  100.0% (9/9)     IGHD3-16*01  12   ...-----------------------------------------------------------------------  14
J  88.5% (46/52)    IGHJ6*02     11   ----------------------......C....T..A....T...........A.........C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_109576

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_3323   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_3323   91   GAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ...................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_3323   181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3323   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_109574

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            12.2    32   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCCTCCTCGA	TACGAT	CCCACCGT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATTCCTCCTCGATACGATCCCACCGTTACGGTATGGACATC	ARDSSSIRSHRYGMDI	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3324   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTCAGTAGTTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-74*01  47   ........................C.....................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  H  I  N  S  D  G  G  T  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3324   91   TGTGGGTCTCACATATTAATAGCGATGGGGGTACCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-74*01  137  ............G.........T......A...G.....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  K  T  L  Y  L  Q  L  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  S  S  S  I  R  S  
                    Query_3324   181  AGAAAACCTTGTATCTGCAATTGAACAGTCTGAGAGGCGAGGACACGGCTGTATATTACTGCGCAAGAGATTCCTCCTCGATACGATCCC  270
V  94.4% (236/250)  IGHV3-74*01  227  ....C..GC...........A...............C...............G........T........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-3*01   5    ---------------------------------------------------------------------------------......---  10

                                      T------------------>                                 
                                      H  R  Y  G  M  D  I  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3324   271  ACCGTTACGGTATGGACATCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  97.9% (47/48)    IGHJ6*02     15   -----............G...................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_16632

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGCAGTTAC	CTTTAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGCAGTTACCTTTATTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_3325   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTACAAACTA  90
V  94.5% (275/291)  IGHV5-51*01  6    .................................................................G...........G......C.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  D  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_3325   91   CTGGATCGACTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  94.5% (275/291)  IGHV5-51*01  96   ........G...................................................................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  L  E  G  Q  I  T  I  S  A  D  N  S  I  G  T  A  Y  L  Q  L  H  S  L  K  A  S  D  T  A
                    Query_3325   181  GTCCCTCGAAGGCCAAATCACCATCTCAGCCGACAACTCCATCGGCACCGCCTACCTGCAGTTGCACAGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (275/291)  IGHV5-51*01  186  ....T..C.......GG...................G......A..................G.AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_3325   271  CATGTATTATTGTGCGAGACATGGGGATGATAGTGGCAGTTACCTTTATTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  94.5% (275/291)  IGHV5-51*01  276  .........C...........---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD1-26*01  4    -----------------------------.......G..C...-----------------------------------------------  17
J  98.1% (53/54)    IGHJ6*02     9    -------------------------------------------------....A....................................  49

                                                   
                                        T  V  S  S 
                    Query_3325   361  CACCGTCTCCTCA  373
J  98.1% (53/54)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_98028

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           294     7e-82
IGHD3-22*01                                                                                           14.1    8.8  
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGCCTGC	AGTAGTAATTACT	GTTATGACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGCCTGCAGTAGTAATTACTGTTATGACGACTACTTCTACGGTATGGACGTC	ARVACSSNYCYDDYFYGMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	96	18	0	84.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  T  G  N  Y  Y  W  T  W  I  R  Q  R  P  E  K  G 
                    Query_3326   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAACACTGGCAATTACTACTGGACCTGGATCCGCCAGCGCCCAGAGAAGGGC  90
V  87.6% (219/250)  IGHV4-31*03  49   ...............................G........G..G...TGG...........G..............A.....G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  N  G  I  T  Y  Y  S  P  S  L  R  G  R  I  A  I  S  V  D  R  S 
                    Query_3326   91   CTGGAGTGGATTGGATACATATATTACAATGGGATCACCTACTACAGCCCGTCCCTCCGGGGGCGAATTGCCATATCAGTAGACAGGTCT  180
V  87.6% (219/250)  IGHV4-31*03  139  ..............G.....C.......G.....G...........A..........AA.A.T...G..A...............C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  K  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  G  T  Y  Y  C  A  R  V  A  C  S  S  N  Y 
                    Query_3326   181  AAGAAACAATTCTCATTGAGGCTGAGCTCCGTGACTGCCGCGGACACGGGCACTTATTACTGTGCGAGAGTCGCCTGCAGTAGTAATTAC  270
V  87.6% (219/250)  IGHV4-31*03  229  .....C..G.....CC...A.........T...................C.GTG................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  84.6% (11/13)    IGHD3-22*01  17   ------------------------------------------------------------------------------...G..T.....  28

                                      DR3-IMGT------------------------>                                 
                                       C  Y  D  D  Y  F  Y  G  M  D  V  W  G  P  G  T  T  V  T  V  S  S 
                    Query_3326   271  TGTTATGACGACTACTTCTACGGTATGGACGTCTGGGGCCCAGGGACCACGGTCACCGTCTCCTCA  336
D  84.6% (11/13)    IGHD3-22*01  29   .-----------------------------------------------------------------  29
J  96.4% (54/56)    IGHJ6*02     7    ----------......A.......................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_98025

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           305     3e-85
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AACAG	TCTAC	TACTATGATAGTAGT	ATTTATCAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAACAGTCTACTACTATGATAGTAGTATTTATCACGACTAC	TTVYYYDSSIYHDY	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	102	12	0	89.5
CDR3-IMGT (germline)	249	255	7	6	1	0	85.7
Total	N/A	N/A	255	225	30	0	88.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  L  S  F  S  D  A  W  L  S  W  V  R  H  T  P  G  R  G  L  
                    Query_3327   1    GGTCCCTGAGACTCTCCTGTGCAGTGTCTGGATTATCTTTCAGTGACGCTTGGCTGAGCTGGGTCCGCCACACTCCAGGGAGGGGACTGG  90
V  88.2% (225/255)  IGHV3-15*01  47   .......T................CC........CA........A....C...A................GG.........A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  I  G  R  I  K  S  R  T  D  G  G  A  A  E  Y  A  A  P  V  R  G  R  F  T  I  S  R  D  
                    Query_3327   91   AGTGGATTGGCCGTATCAAAAGCAGAACTGATGGTGGGGCAGCAGAGTACGCTGCACCCGTGAGAGGCAGATTCACCATCTCAAGAGATG  180
V  88.2% (225/255)  IGHV3-15*01  137  .....G..........T.......A.............A..A....C................A..........................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  N  T  L  Y  L  Q  V  T  S  L  K  T  D  D  S  G  V  Y  Y  C  T  T  V  Y  Y  Y  D  
                    Query_3327   181  ACTCAAAAAACACGCTGTATTTGCAAGTGACTAGCCTGAAGACCGACGACTCAGGCGTGTATTATTGTACAACAGTCTACTACTATGATA  270
V  88.2% (225/255)  IGHV3-15*01  227  .T..................C.....A...AC........A.....G...A...C.........C.....C....---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (15/15)   IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------->                                  
                                      S  S  I  Y  H  D  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_3327   271  GTAGTATTTATCACGACTACTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  324
D  100.0% (15/15)   IGHD3-22*01  15   .....-------------------------------------------------  19
J  97.5% (39/40)    IGHJ4*02     9    --------------......................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_98024

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           297     7e-83
IGHD6-13*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GAATGAACACTGC	CTGGTAC	TTGCTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGAACACTGCCTGGTACTTGCTTTACTTTGAAGAC	ARMNTAWYLLYFED	237	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	20	4	0	83.3
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	21	3	0	87.5
FR3-IMGT	123	236	114	106	8	0	93
CDR3-IMGT (germline)	237	240	4	4	0	0	100
Total	N/A	N/A	228	209	19	0	91.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  S  E  Y  A  M  G  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  L  
                    Query_3328   13   GTACAGCCTCTGGATTCACCTTTAGTGAATATGCCATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAAGTCTTA  102
V  91.7% (209/228)  IGHV3-23*01  65   ..G......................CAGC.........A............................................GC.A...  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  T  G  G  S  T  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_3328   103  GTGGGACTGGTGGTAGCACATACTACCCAGACTCCGTGAAGGGCCGGTTCACCGTGTCCAGAGACAATTCCAAGAACACTCTGTATCTAC  192
V  91.7% (209/228)  IGHV3-23*01  155  ....T.G...................G..........................A.C.......................G........G.  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  M  N  T  A  W  Y  L  L  Y  F  E  D  W  
                    Query_3328   193  AAATGAGCAGCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGAATGAACACTGCCTGGTACTTGCTTTACTTTGAAGACTGGG  282
V  91.7% (209/228)  IGHV3-23*01  245  ......A...........................A.....C.......------------------------------------------  292
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------.......----------------------  21
J  95.7% (44/46)    IGHJ4*02     3    --------------------------------------------------------------------------........CT......  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_3328   283  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  95.7% (44/46)    IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_98027

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           347     7e-98
IGHD6-19*01                                                                                           25.7    0.003
IGHJ1*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTTGTC	CAGTGGCTGGTAC	TCTTC	CTTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTTGTCCAGTGGCTGGTACTCTTCCTTCCAGTAT	ARGLSSGWYSSFQY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  A 
                    Query_3329   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGGAGTTACTACTGGAGCTGGATCCGGCAACCCCCAGGGAAGGCA  90
V  94.4% (236/250)  IGHV4-61*01  49   ....................................G..........T..........................G.............G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  D  I  Y  N  S  G  T  A  F  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S 
                    Query_3329   91   CTGGAGTGGATTGGGGATATCTATAACAGTGGGACCGCCTTCTATAACCCCTCCCTCAGGAGCCGAGTCACCATATCAGTAGACACGTCC  180
V  94.4% (236/250)  IGHV4-61*01  139  ...............T........T.........G.A..AA...C.............A...T...........................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  S  S  G  W  Y 
                    Query_3329   181  AAGAACCAGTTCTCCCTGAACCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGTTGTCCAGTGGCTGGTAC  270
V  94.4% (236/250)  IGHV4-61*01  229  ....................G.................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD6-19*01  9    -----------------------------------------------------------------------------.............  21

                                      -------------->                                  
                                       S  S  F  Q  Y  W  G  Q  G  P  L  V  T  V  S  S  
                    Query_3329   271  TCTTCCTTCCAGTATTGGGGCCAGGGCCCCCTGGTCACCGTCTCCTCAG  319
J  93.2% (41/44)    IGHJ1*01     9    -----.......C.C............A.....................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_98026

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         438     5e-125
IGHD2-21*02                                                                                           50.7    1e-10 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTGG	GCATATTGTGGTGGTGACTGCTATTC	AC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTGGGCATATTGTGGTGGTGACTGCTATTCACTTGACTAC	ARWAYCGGDCYSLDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	284	4	0	98.6


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_3330     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGCGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTA  90
V  98.6% (284/288)  IGHV5-10-1*01  6    .................................................A....................................G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  Q  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_3330     91   CTGGATCAGCTGGGTGCGCCAGATGCCCGGGCAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  98.6% (284/288)  IGHV5-10-1*01  96   ...............................A..........................................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3330     181  GTCCTTCCAAGGCCACGTCACCGTCTCAGCTGACAAGTCCATCAGCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.6% (284/288)  IGHV5-10-1*01  186  ......................A...................................................................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          M  Y  Y  C  A  R  W  A  Y  C  G  G  D  C  Y  S  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3330     271  CATGTATTACTGTGCGAGGTGGGCATATTGTGGTGGTGACTGCTATTCACTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  98.6% (284/288)  IGHV5-10-1*01  276  ..................------------------------------------------------------------------------  293
                                          M  Y  Y  C  A                                                                           
D  100.0% (26/26)   IGHD2-21*02    2    ----------------------..........................------------------------------------------  27
J  100.0% (42/42)   IGHJ4*02       7    --------------------------------------------------........................................  46

                                          
                                          
                    Query_3330     361  AG  362
J  100.0% (42/42)   IGHJ4*02       47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_98021

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           386     2e-109
IGHD2-2*01                                                                                            19.9    0.18  
IGHJ6*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGGGCTGCATCTTGCAGCG	GTACTAGCTGCTA	CGATTTAGG	CGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGGGCTGCATCTTGCAGCGGTACTAGCTGCTACGATTTAGGCGGAATGGACGTC	ARRAASCSGTSCYDLGGMDV	291	350	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	102	12	0	89.5
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	270	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  L  G  S  G  Y  N  F  A  
                    Query_3331   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGCTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCTGGGTTCTGGATACAACTTTGCCA  93
V  92.2% (270/293)  IGHV5-51*03  2    .............................G...................................AA..............G....A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      K  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  T  I  Y  P  S  D  S  D  T  R  Y  
                    Query_3331   94   AATACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGACCATCTATCCTTCTGACTCTGATACCCGATACA  183
V  92.2% (270/293)  IGHV5-51*03  92   GC..........G............................................T..........GG.............A......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  L  S  I  A  Y  L  Q  W  S  S  L  G  G  S  D  
                    Query_3331   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCCTCTCCATCGCCTATCTGCAGTGGAGCAGCCTGGGGGGCTCGGACA  273
V  92.2% (270/293)  IGHV5-51*03  182  .................................C..........A..AG..C......C..................AA..C........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------------CDR3-IMGT------------------------>             
                                      T  A  T  Y  Y  C  A  R  R  A  A  S  C  S  G  T  S  C  Y  D  L  G  G  M  D  V  W  G  H  G  
                    Query_3331   274  CCGCCACTTATTACTGTGCGAGAAGGGCTGCATCTTGCAGCGGTACTAGCTGCTACGATTTAGGCGGAATGGACGTCTGGGGCCACGGGA  363
V  92.2% (270/293)  IGHV5-51*03  272  ......TG...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  92.3% (12/13)    IGHD2-2*01   15   ------------------------------------------....C........-----------------------------------  27
J  93.5% (43/46)    IGHJ6*02     17   ----------------------------------------------------------------...T.................A....  42

                                                          
                                      T  T  V  I  V  S  S 
                    Query_3331   364  CCACGGTCATCGTCTCCTCA  383
J  93.5% (43/46)    IGHJ6*02     43   .........C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_98020

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           369     2e-104
IGHD6-13*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCTCGCCACAGAA	AGCAGCAGCT	ATAACTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCTCGCCACAGAAAGCAGCAGCTATAACTTACTACTTTGACTAC	ARVSPQKAAAITYYFDY	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	240	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  H  *  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3332   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCAGTAGTTACCACTAGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (240/244)  IGHV4-59*01  49   .............................T..................T...G.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3332   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (240/244)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  P  Q  K  A  A  A  I 
                    Query_3332   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTCTCGCCACAGAAAGCAGCAGCTATA  270
V  98.4% (240/244)  IGHV4-59*01  229  ....................C...........................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  7    -----------------------------------------------------------------------------..........---  16

                                      ----------------->                                  
                                       T  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3332   271  ACTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  100.0% (48/48)   IGHJ4*02     1    ----................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_136711

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            355     3e-100
IGHD4-17*01                                                                                           14.1    8.1   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3333   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.3% (236/245)  IGHV3-7*03   47   .............................................G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  A  K  F  Y  V  D  S  V  K  G  R  F  T  I  T  R  D  N  A  
                    Query_3333   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGCGAAATTCTATGTGGACTCTGTGAAGGGCCGATTCACCATCACCAGAGACAACGCCA  180
V  96.3% (236/245)  IGHV3-7*03   137  .................................A.....A..................................T...............  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  Q  M  N  T  L  T  A  E  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  
                    Query_3333   181  AGAACTCACTGTATTTGCAAATGAACACCCTGACAGCCGAAGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTT  270
V  96.3% (236/245)  IGHV3-7*03   227  ..............C............G.....G......G........................-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD4-17*01  5    --------------------------------------------------------------------------.......---------  11
J  97.8% (45/46)    IGHJ6*02     17   -------------------------------------------------------------------------------------....A  21

                                      ------->                                 
                                      L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3333   271  TGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  311
J  97.8% (45/46)    IGHJ6*02     22   .........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_240755

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           433     1e-123
IGHD2-21*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGCATACA	ATTGTGG	ACCGGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCATACAATTGTGGACCGGGGACTAC	ARGGIQLWTGDY	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	75	0	0	100
CDR1-IMGT	78	101	24	24	0	0	100
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	286	9	0	96.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_3334   3    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  92
V  96.9% (286/295)  IGHV1-18*01  1    ..........................................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  L  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  V  S  T  Y  I  G  N  T  N  Y 
                    Query_3334   93   AGCTATGGTCTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGGTCAGCACTTACATTGGTAACACAAACTAT  182
V  96.9% (286/295)  IGHV1-18*01  91   .........A..................................................A.....G......A................  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  L  E  L  K  S  L  R  S  D  G 
                    Query_3334   183  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACTTGGAGCTGAAGAGCCTGAGATCTGACGGC  272
V  96.9% (286/295)  IGHV1-18*01  181  .........C..................................................A.........G.................A.  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  V  Y  Y  C  A  R  G  G  I  Q  L  W  T  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3334   273  ACGGCCGTCTATTACTGTGCGAGAGGGGGCATACAATTGTGGACCGGGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  96.9% (286/295)  IGHV1-18*01  271  ........G................---------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                 
D  100.0% (7/7)     IGHD2-21*01  6    -----------------------------------.......----------------------------------------------  12
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_80212

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3335   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  98.4% (239/243)  IGHV4-59*01  49   ......................................................................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3335   91   TGGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  .........T................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_3335   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (18/20)    IGHD5-18*01  1    ----------------------------------------------------------------..........C.....T...------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3335   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_240757

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           389     2e-110
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ1*01                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGAGTGGCCAC	AGCAGCAGCTGGT	GGACAT	CTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGAGTGGCCACAGCAGCAGCTGGTGGACATCTGAGTACTTCCAGGAG	ARMSGHSSSWWTSEYFQE	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  P  S  H
                    Query_3336   1    GCAGCTGGTGCAGTCTGGAGCAGAGCTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTCCCCAGCCA  90
V  93.1% (269/289)  IGHV5-51*03  6    .........................G....A..................................................TA.....T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  T  P  G  K  G  L  E  W  M  G  L  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_3336   91   TTGGATCGGCTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGACTCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  93.1% (269/289)  IGHV5-51*03  96   C......................T...........................GA............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  K  G  Q  V  T  I  S  V  D  K  S  I  N  T  A  F  L  R  W  A  S  L  K  A  S  D  S  G
                    Query_3336   181  GTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAACACCGCCTTCCTGCGCTGGGCCAGCCTGAAGGCCTCGGACAGCGG  270
V  93.1% (269/289)  IGHV5-51*03  186  .......C.....................C..............G........A.....AG...AG....................C..C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  M  S  G  H  S  S  S  W  W  T  S  E  Y  F  Q  E  W  G  Q  G  T  L  V  S
                    Query_3336   271  CATGTATTACTGTGCGAGAATGAGTGGCCACAGCAGCAGCTGGTGGACATCTGAGTACTTCCAGGAGTGGGGCCAGGGCACCCTGGTCTC  360
V  93.1% (269/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (13/13)   IGHD6-13*01  7    -------------------------------.............----------------------------------------------  19
J  92.2% (47/51)    IGHJ1*01     2    --------------------------------------------------....A.........C.C.....................A.  41

                                                 
                                        V  S  S  
                    Query_3336   361  CGTCTCCTCAG  371
J  92.2% (47/51)    IGHJ1*01     42   ...........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_80210

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           433     1e-123
IGHD5-12*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTGGAGGG	TAGTGGCTAC	TTAGAACCCCTTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGGAGGGTAGTGGCTACTTAGAACCCCTTGACTACTACGGTATGGACGTC	ARLEGSGYLEPLDYYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_3337   1    GCAGCTAGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTA  90
V  97.9% (283/289)  IGHV5-51*03  6    ......G...............................................................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_3337   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  97.9% (283/289)  IGHV5-51*03  96   ..................................................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3337   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (283/289)  IGHV5-51*03  186  ............................................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  L  E  G  S  G  Y  L  E  P  L  D  Y  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_3337   271  CATGTATTATTGTGCGAGATTGGAGGGTAGTGGCTACTTAGAACCCCTTGACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  97.9% (283/289)  IGHV5-51*03  276  .........C.........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD5-12*01  8    ---------------------------..........-----------------------------------------------------  17
J  100.0% (53/53)   IGHJ6*02     10   --------------------------------------------------........................................  49

                                                   
                                        T  V  S  S 
                    Query_3337   361  CACCGTCTCCTCA  373
J  100.0% (53/53)   IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_240751

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           305     3e-85
IGHD2-8*02                                                                                            21.8    0.042
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAGCTGGGA	ATTGTACTGGT	AATAGGTGCCAGTCCTATGGCTTCAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAGCTGGGAATTGTACTGGTAATAGGTGCCAGTCCTATGGCTTCAGTGACTCC	ARAAGNCTGNRCQSYGFSDS	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	222	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  R  H  F  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3338   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGACACTTTGCCATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.2% (222/249)  IGHV3-23*01  47   ....................................C......CAG..A........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  G  S  S  R  Q  S  P  F  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_3338   91   AGTGGGTCTCGGCTATTGGTAGTAGTCGTCAGAGTCCATTTTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  89.2% (222/249)  IGHV3-23*01  137  ..........A......A..G.....G..GGT..CA...AC..............................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  M  Y  Y  C  A  R  A  A  G  N  C  T  G  
                    Query_3338   181  AGAACACACTATATCTGCAGATGAATAGCCTGCGAGCCGAGGACACGGCCATGTATTACTGTGCGAGAGCAGCTGGGAATTGTACTGGTA  270
V  89.2% (222/249)  IGHV3-23*01  227  .......G..G........A.....C......A.................G.A.............A..---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD2-8*02   6    ------------------------------------------------------------------------------...........-  16

                                      R3-IMGT------------------------>                                  
                                      N  R  C  Q  S  Y  G  F  S  D  S  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_3338   271  ATAGGTGCCAGTCCTATGGCTTCAGTGACTCCTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTCAG  336
J  95.1% (39/41)    IGHJ4*02     8    -------------------------.....A..............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_240750

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           344     6e-97
IGHD3-22*01                                                                                           39.1    3e-07
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCTCTG	ATTACTATGAAAGTAGTGGTTAT	N/A	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCTCTGATTACTATGAAAGTAGTGGTTATGACCTC	ARPSDYYESSGYDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  G  A  S  G  F  T  F  N  Y  Y  S  L  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3339   1    GGTCCCTGAGACTCTCCTGTGGAGCCTCTGGATTCACCTTCAATTACTATAGCTTGAACTGGGTCCGCCAGGCTCCCGGGAAGGGTCTGG  90
V  94.4% (234/248)  IGHV3-21*01  47   .....................C....................G.AG.......A......................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  S  I  S  S  H  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3339   91   AGTGGCTCTCATCCATTAGCAGTCATAGTAGTTACATATATTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (234/248)  IGHV3-21*01  137  .....G.............T...AG...............C.................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  S  D  Y  Y  E  S  
                    Query_3339   181  AGAACTCACTGTATCTGCAAATGAACAACCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGACCCTCTGATTACTATGAAAGTA  270
V  94.4% (234/248)  IGHV3-21*01  227  ...........................G........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.7% (22/23)    IGHD3-22*01  3    ---------------------------------------------------------------------------..........T....  17

                                      ------------->                                  
                                      S  G  Y  D  L  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_3339   271  GTGGTTATGACCTCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  318
D  95.7% (22/23)    IGHD3-22*01  18   ........----------------------------------------  25
J  95.0% (38/40)    IGHJ5*02     12   --------....C.................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_80215

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_3340   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AGT.A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S 
                    Query_3340   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T.A....A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_3340   181  CAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ..............G.....C..................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_3340   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------.................................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_240752

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           335     4e-94
IGHD1-1*01                                                                                            16.1    2.1  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	AAACA	ACAACTGG	CGC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCAGAAAACAACAACTGGCGCAC	TRKQQLAH	249	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	234	20	0	92.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  C  S  G  F  A  F  A  D  D  A  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_3341   1    GGTCCCTGAGACTCTCCTGTACATGTTCTGGATTCGCCTTTGCTGATGATGCTATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.1% (234/254)  IGHV3-49*04  47   .......................GC..........A......G....T........A.................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  A  V  I  R  S  K  N  Y  D  G  T  T  E  F  A  A  S  V  K  G  R  F  A  I  S  R  D  
                    Query_3341   91   AGTGGGTAGCCGTCATCAGAAGCAAAAATTATGATGGGACAACAGAATTTGCCGCGTCTGTGAAAGGCAGATTCGCCATCTCAAGAGATG  180
V  92.1% (234/254)  IGHV3-49*04  137  .........GTT....T.........GC.....G..............AC........................A...............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------CDR3-IMGT-----
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  K  Q  Q  L  A  
                    Query_3341   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAAGACACAGCCGTGTATTATTGCACCAGAAAACAACAACTGGCGC  270
V  92.1% (234/254)  IGHV3-49*04  227  ..............................................G.................C..T..T...----------------  300
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (8/8)     IGHD1-1*01   4    -------------------------------------------------------------------------------........---  11

                                      ->                                  
                                      H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3341   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (36/36)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_54054

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD6-25*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTC	ARQSSAGRTKYGMDV	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	69	5	0	93.2
CDR1-IMGT	76	99	24	18	6	0	75
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	279	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  S  S  G  Y  D  F  L  
                    Query_3342   2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGAGTTCTGGATACGACTTTCTCG  91
V  94.6% (279/295)  IGHV5-51*01  2    ....G.....G.......................A.....C...........................G...........AG....AC.A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_3342   92   ACTACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACA  181
V  94.6% (279/295)  IGHV5-51*01  92   G...........G.......................................................................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_3342   182  GCCCGTCATTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGAACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  94.6% (279/295)  IGHV5-51*01  182  .......C.........................................C........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  M  V  T  V  
                    Query_3342   272  CCGCCAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCT  361
V  94.6% (279/295)  IGHV5-51*01  272  ......T..................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD6-25*01  7    --------------------------.......---------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -----------------------------------------------...............................C...........  57

                                           
                                      S  S 
                    Query_3342   362  CCTCA  366
J  97.9% (47/48)    IGHJ6*02     58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_54055

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           371     7e-105
IGHD2-15*01                                                                                           21.8    0.042 
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGGGTATTCTGTTGC	GGTGGTAGGTGCTA	GTG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGGGTATTCTGTTGCGGTGGTAGGTGCTAGTGACAACTGGTTCGACCCC	ARHGGYSVAVVGASDNWFDP	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  I  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_3343   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATAGTATTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  97.2% (244/251)  IGHV4-39*01  49   .........................................C.G.....G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3343   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  97.2% (244/251)  IGHV4-39*01  139  ..........................................................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  V  S  L  K  L  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  H  G  G  Y  S  V  A 
                    Query_3343   181  AAGAATCAGGTCTCCCTGAAGCTGAGCTCTATGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATGGCGGGTATTCTGTTGCG  270
V  97.2% (244/251)  IGHV4-39*01  229  .....C...T....................G........................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD2-15*01  14   -----------------------------------------------------------------------------------------.  14

                                      DR3-IMGT------------------------>                                  
                                       V  V  G  A  S  D  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3343   271  GTGGTAGGTGCTAGTGACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  337
D  92.9% (13/14)    IGHD2-15*01  15   .......C.....------------------------------------------------------  27
J  100.0% (51/51)   IGHJ5*02     1    ----------------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_80219

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            255     3e-70
IGHD3-16*01                                                                                           12.2    33   
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GCA	TTTGGG	CGCGGTTGAAGGCTCGCAGTTCACTT	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGCATTTGGGCGCGGTTGAAGGCTCGCAGTTCACTTTGGTACGACCCC	AKGIWARLKARSSLWYDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	88	26	0	77.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	206	43	0	82.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  A  R  H  G  P  G  K  G  L  
                    Query_3344   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGACGACTATGCCATGCACTGGGCCCGCCATGGTCCAGGGAAGGGCCTGG  90
V  82.7% (206/249)  IGHV3-9*01   47   ...........................................T..T................T...G..A.C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  T  G  N  A  T  T  I  D  Y  S  N  S  V  K  G  R  F  T  L  S  G  D  N  A  
                    Query_3344   91   AGTGGGTCTCAGGTATTACTGGCAATGCAACGACTATAGACTATTCGAATTCCGTGAAGGGCCGATTCACCCTCTCCGGAGACAATGCCC  180
V  82.7% (206/249)  IGHV3-9*01   137  ..................G.T.G...AGTGGT.GC....G....G..G.C..T..................A.....A.......C...A  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      Q  G  V  V  Y  L  Q  M  N  S  L  R  L  D  D  S  G  V  S  Y  C  A  K  G  I  W  A  R  L  K  
                    Query_3344   181  AGGGTGTCGTGTATCTGCAAATGAACAGTCTTAGACTTGACGACTCGGGCGTCTCCTATTGTGCAAAAGGCATTTGGGCGCGGTTGAAGG  270
V  82.7% (206/249)  IGHV3-9*01   227  ..AACTC.C......................G...GC...G...A...C.T.G.AT..C..........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD3-16*01  15   ------------------------------------------------------------------------......------------  20

                                      IMGT--------------------->                                  
                                      A  R  S  S  L  W  Y  D  P  R  G  Q  G  P  L  V  T  V  S  S  
                    Query_3344   271  CTCGCAGTTCACTTTGGTACGACCCCAGGGGCCAGGGACCTCTGGTCACCGTCTCCTCAG  330
J  91.3% (42/46)    IGHJ5*02     6    --------------....T.......T...........A.C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_80218

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           238     5e-65
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ6*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATACT	GTCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	TRGLLIEDPNYVWGSFRRNHNCYTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	39	12	0	76.5
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	91	23	0	79.8
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	198	46	0	81.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  R  L  E 
                    Query_3345   1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGCAGCCTCCCGGGAGGAGACTGGAG  90
V  81.1% (198/244)  IGHV4-59*01  49   ..................A....C.......G.......A...G..........AG....A.C........C..A....A.G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  G  M  S  R  K 
                    Query_3345   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGGCATGTCTAGGAAA  180
V  81.1% (198/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T..A..C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  T  R  G  L  L  I  E  D  P  N  Y 
                    Query_3345   181  CAGTTGTCTCTCAACCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTACGAGAGGTCTTCTTATCGAAGATCCCAACTAT  270
V  81.1% (198/244)  IGHV4-59*01  229  .....C..C..G..G....G.TCT.....................GT.....A....G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                 
                                       V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_3345   271  GTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCAAGGGACTCCGGTCACCGTCTCGTCA  345
D  94.1% (16/17)    IGHD3-16*02  14   .............A...----------------------------------------------------------  30
J  91.7% (33/36)    IGHJ6*02     27   ---------------------------------------.................CA.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_240759

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           296     2e-82
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GACTAGTGA	GATAGTAGTG	CTTGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGACTAGTGAGATAGTAGTGCTTGGTGCTTTCGATATG	ARETSEIVVLGAFDM	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	217	28	0	88.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  R  S  H  S  W  S  W  I  R  Q  P  P  G  K  G  M  E 
                    Query_3346   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGAGACTCCATCAGAAGTCATTCGTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGAATGGAG  90
V  88.6% (217/245)  IGHV4-59*01  49   ...................C.........T.G.........T...T.C.AC.......................A.........C.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  V  E  Y  R  G  G  P  N  Y  N  P  S  L  N  S  R  L  T  I  S  V  D  M  S  K  N 
                    Query_3346   91   TGGATTGGAAATGTCGAATACAGGGGAGGCCCCAACTACAACCCCTCCCTCAACAGTCGACTCACCATATCAGTGGACATGTCCAAGAAT  180
V  88.6% (217/245)  IGHV4-59*01  139  ........GT..A..T.T.....T..GA..A......................G......G.............A....C.........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  T  S  E  I  V  V  L  G 
                    Query_3346   181  CAGTTCTCCCTGAAGCTGAGCAGTGTGACCGCGGCGGACACGGCCGTCTATTACTGTGCGAGAGAGACTAGTGAGATAGTAGTGCTTGGT  270
V  88.6% (217/245)  IGHV4-59*01  229  .....................TC.........T..............G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  11   --------------------------------------------------------------------------..........------  20
J  95.6% (43/45)    IGHJ3*02     4    -----------------------------------------------------------------------------------------.  4

                                      ----------->                                
                                       A  F  D  M  W  G  Q  G  T  M  V  T  V  S  S
                    Query_3346   271  GCTTTCGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  314
J  95.6% (43/45)    IGHJ3*02     5    .....T.....C................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_240758

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           397     8e-113
IGHD1-1*01                                                                                            10.3    134   
IGHJ4*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAACG	GGTAACCCCATATCGCGGC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTAT	ARGTGNPISRLGY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_3347   1    GCAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTA  90
V  93.8% (272/290)  IGHV1-46*01  6    ..................G.C...............................G.....................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  T  G  G  T  N  Y  A  Q
                    Query_3347   91   TTATATGCACTGGGTACGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTACTGGTGGCACAAATTACGCACA  180
V  93.8% (272/290)  IGHV1-46*01  96   C..............G...................................................GG....A......GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  P  T  S  T  V  Y  L  D  L  S  S  L  E  S  E  D  T  A
                    Query_3347   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGCCCACGAGCACAGTCTACTTGGACCTGAGCAGCCTTGAATCTGAGGACACGGC  270
V  93.8% (272/290)  IGHV1-46*01  186  .....................................T.................A....G...........GAG...............  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  G  T  G  N  P  I  S  R  L  G  Y  W  G  Q  G  T  P  V  T  V  S  A  
                    Query_3347   271  CGTTTATTACTGCGCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTATTGGGGCCAGGGAACCCCGGTCACCGTCTCCGCAG  356
V  93.8% (272/290)  IGHV1-46*01  276  ...G........T.......------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (5/5)     IGHD1-1*01   11   --------------------.....-------------------------------------------------------------  15
J  90.5% (38/42)    IGHJ4*02     7    --------------------------------------------...A...C................T.............T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_54052

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3348   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ........................................G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_3348   91   TGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ........G...A..T...............................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y 
                    Query_3348   181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............C....C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3348   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_54053

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           363     1e-102
IGHD3-3*01                                                                                            33.4    1e-05 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCCATCTTGGCGG	TTACGCTTTTTGGCGTGGTTATT	CCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCCATCTTGGCGGTTACGCTTTTTGGCGTGGTTATTCCCTTGACTAC	ARDPHLGGYAFWRGYSLDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3349   1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCCCCAGGCAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-33*01  47   ....................G........................G...........................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  H  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_3349   91   AGTGGGTGGCTGTTATATGGTATGATGGAAGTAATAAATACCATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCA  180
V  96.4% (241/250)  IGHV3-33*01  137  ..........A..............................T.............................A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  K  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  H  L  G  G  Y  
                    Query_3349   181  AGAAGACGTTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGAGATCCCCATCTTGGCGGTTACG  270
V  96.4% (241/250)  IGHV3-33*01  227  ....C...C.................................................C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.3% (21/23)    IGHD3-3*01   4    -------------------------------------------------------------------------------------.....  8

                                      -IMGT----------------------->                                  
                                      A  F  W  R  G  Y  S  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3349   271  CTTTTTGGCGTGGTTATTCCCTTGACTACTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  333
D  91.3% (21/23)    IGHD3-3*01   9    A.......A.........---------------------------------------------  26
J  97.6% (41/42)    IGHJ4*02     7    ---------------------............................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_115774

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           388     5e-110
IGHD3-3*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	GGAGAGTCTG	CGATTTCTGGAGTGGTTAT	CCCCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTAC	AREESLRFLEWLSPDY	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	70	5	0	93.3
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	299	8	7	1	0	87.5
Total	N/A	N/A	296	272	24	0	91.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  L  T 
                    Query_3350   4    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCAGGGGCCTCAGTAAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTGACC  93
V  91.9% (272/296)  IGHV1-18*01  1    .....T.....G.............................T...........G.................T..............T...  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  S  M  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  S  N  I  N  Y 
                    Query_3350   94   AGATATAGTATGTCTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATAGCAACATAAATTAT  183
V  91.9% (272/296)  IGHV1-18*01  91   ..C...G....CAGC....................................................C.......G.T....C...C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  L  L  G  R  V  T  M  T  I  D  T  S  A  N  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_3350   184  GCACAGAAACTCCTGGGCAGAGTCACCATGACCATAGACACATCCGCGAACACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  273
V  91.9% (272/296)  IGHV1-18*01  181  ........G....A....................C..........A...G........................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  E  E  S  L  R  F  L  E  W  L  S  P  D  Y  W  G  Q  G  T  L  V  I 
                    Query_3350   274  ACGGCCGTGTATTATTGTGCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTACTGGGGCCAGGGAACCCTGGTCATC  363
V  91.9% (272/296)  IGHV1-18*01  271  ..............C........A..----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.7% (18/19)    IGHD3-3*01   7    ------------------------------------......T............-----------------------------------  25
J  97.1% (34/35)    IGHJ4*02     9    ------------------------------------------------------------............................C.  38

                                           
                                       V  S
                    Query_3350   364  GTCTC  368
J  97.1% (34/35)    IGHJ4*02     39   .....  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_115775

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD5-18*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATAGTC	ATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATAGTCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	240	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3351   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.8% (240/243)  IGHV4-59*01  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  N  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3351   91   TGGATTGGGTATATCTACAACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (240/243)  IGHV4-59*01  139  .................TT.......................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D 
                    Query_3351   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATATAGTCATGGTTACGGAGGAGTTGAC  270
V  98.8% (240/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD5-18*01  13   ----------------------------------------------------------------------........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3351   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_115776

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            363     2e-102
IGHD3-3*01                                                                                            21.8    0.045 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAG	CGATTTGTGGAGAGGTT	CTACCCCTAAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGAGATAGCGATTTGTGGAGAGGTTCTACCCCTAAGTTTGACTAC	ARDSDLWRGSTPKFDY	273	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	80	30	25	5	0	83.3
FR2-IMGT	81	131	51	48	3	0	94.1
CDR2-IMGT	132	158	27	26	1	0	96.3
FR3-IMGT	159	272	114	102	12	0	89.5
CDR3-IMGT (germline)	273	280	8	7	1	0	87.5
Total	N/A	N/A	280	256	24	0	91.4


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  T  I  S  G  D  S  V  S  S  E  S  V  A  W  N  W  
                    Query_3352  1    CAGGACTGGTGAAGCCCTCGCAGACTCTCTCACTCACCTGTACCATCTCCGGAGACAGTGTCTCCAGCGAAAGTGTTGCTTGGAACTGGG  90
V  91.4% (256/280)  IGHV6-1*01  26   .........................C...............G..........G...........T...A.C....C.............A  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     V  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  M  S  K  W  Y  N  H  Y  S  D  S  V  K  
                    Query_3352  91   TCAGGCAGTCGCCGTCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACATGTCCAAGTGGTATAATCATTATTCAGATTCTGTGAAAA  180
V  91.4% (256/280)  IGHV6-1*01  116  ..........C..A.....................................G................G.....G...TA..........  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  M  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  M  N  S  V  T  P  E  D  T  A  M  Y  Y  
                    Query_3352  181  GTCGAATGACCATCGACCCAGACACATCCAAGAACCAGTTCTCGCTACAGATGAACTCTGTGACCCCCGAGGACACGGCTATGTACTACT  270
V  91.4% (256/280)  IGHV6-1*01  206  .......A......A............................C..G...C.............T...............G....T....  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><-------------------CDR3-IMGT------------------>                                  
                                     C  A  R  D  S  D  L  W  R  G  S  T  P  K  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_3352  271  GTGCTAGAGATAGCGATTTGTGGAGAGGTTCTACCCCTAAGTTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  354
V  91.4% (256/280)  IGHV6-1*01  296  ....A.....--------------------------------------------------------------------------  305
                                     C  A  R                                                                             
D  88.2% (15/17)    IGHD3-3*01  7    -------------......T.....T....------------------------------------------------------  23
J  97.7% (42/43)    IGHJ4*02    6    -----------------------------------------.....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_115777

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     8e-98
IGHD5-18*01                                                                                           18.0    0.63 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGCCCCC	ARDPTGSGYNFGSNWFAP	261	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	18	6	0	75
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	105	9	0	92.1
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	245	23	0	91.4


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  
                    Query_3353   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGC  90
V  91.4% (245/268)  IGHV4-59*01  26   ................T.....................................G........G.AGT.A....................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  S  P  G  K  G  L  E  W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  
                    Query_3353   91   AGTCCCCGGGGAAGGGACTGGAGTGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCA  180
V  91.4% (245/268)  IGHV4-59*01  116  ..C....A.......................G......T..........G.GC.............................A.T.A...  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  S  Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  
                    Query_3353   181  TTTCAGTAGACACGTCCAAGAGCCAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATC  270
V  91.4% (245/268)  IGHV4-59*01  206  .A...................A...............G.....C..................A.......G.................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -------------CDR3-IMGT--------------------->                                  
                                      P  T  G  S  G  Y  N  F  G  S  N  W  F  A  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3353   271  CTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGCCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  348
D  83.3% (15/18)    IGHD5-18*01  1    ---------.......C.G..A.....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    -----------------------------..........A......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_115770

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD5-18*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATAGTC	ATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATAGTCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	240	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3354   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.8% (240/243)  IGHV4-59*01  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  N  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3354   91   TGGATTGGGTATATCTACAACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (240/243)  IGHV4-59*01  139  .................TT.......................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D 
                    Query_3354   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATATAGTCATGGTTACGGAGGAGTTGAC  270
V  98.8% (240/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD5-18*01  13   ----------------------------------------------------------------------........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3354   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_115772

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           324     8e-91
IGHD2-15*01                                                                                           35.3    4e-06
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CT	GGATATTGTGCTGTTGGTAGCTGCTAC	CACCGCTACTCCGAGT	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGCTGGATATTGTGCTGTTGGTAGCTGCTACCACCGCTACTCCGAGTCTTTTGATATC	VKAGYCAVGSCYHRYSESFDI	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  A  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_3355   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCGCCTTCAGTTCCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGGAGGGGACTGG  90
V  91.6% (228/249)  IGHV3-64*05  47   ...................................A........AG......T............................A........  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  L  S  D  G  S  N  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3355   91   AATATGTTTCAGCTATTCTTAGTGATGGGAGTAACACATACTACACAGACTCAGTGAAGGGCAGATTTACCATCTCCAGAGACAATTCCA  180
V  91.6% (228/249)  IGHV3-64*05  137  .................AG....A.....G...G..........G......................C......................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      N  D  M  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  A  G  Y  C  A  V  G  
                    Query_3355   181  ACGACATGTTGTATCTTCAAATGAGCAGTCTGAGACCGGAGGACACGGCTGTCTATTATTGTGTGAAAGCTGGATATTGTGCTGTTGGTA  270
V  91.6% (228/249)  IGHV3-64*05  227  .GA...C.C.....G....................G.T..............G.....C..........---------------------  295
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  88.9% (24/27)    IGHD2-15*01  2    -----------------------------------------------------------------------.........AG..G.....  20

                                      DR3-IMGT-------------------------->                                  
                                      S  C  Y  H  R  Y  S  E  S  F  D  I  W  G  Q  G  A  M  V  S  V  S  S  
                    Query_3355   271  GCTGCTACCACCGCTACTCCGAGTCTTTTGATATCTGGGGCCAAGGGGCAATGGTCTCCGTCTCTTCAG  339
D  88.9% (24/27)    IGHD2-15*01  21   ........-------------------------------------------------------------  28
J  95.6% (43/45)    IGHJ3*02     6    ------------------------.......................A........A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_115773

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           302     3e-84
IGHD7-27*01                                                                                           18.0    0.59 
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCGACTTGAAC	AACTGGGGA	TGGGCAGGGGAGGGTGTTTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCGACTTGAACAACTGGGGATGGGCAGGGGAGGGTGTTTATGATGTC	ATDLNNWGWAGEGVYDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	217	24	0	90


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  I  S  R  Y  Y  W  N  W  I  R  Q  P  P  G  K  A  M  E 
                    Query_3356   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGCCTCCATCAGTCGTTACTACTGGAACTGGATCCGGCAGCCCCCCGGGAAGGCAATGGAG  90
V  90.0% (217/241)  IGHV4-59*01  49   ...................C...........G..........A............G..................A.......G.C.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  T  Y  H  T  G  D  T  D  Y  N  P  S  L  R  N  R  V  A  I  S  M  D  A  S  K  N 
                    Query_3356   91   TGGATCGGATATACCTATCACACTGGGGACACCGACTACAACCCCTCCCTCAGGAATCGAGTCGCCATATCAATGGACGCGTCCAAGAAC  180
V  90.0% (217/241)  IGHV4-59*01  139  .....T..G....T....T...G....AG....A..................A..G.......A........G.A...A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  D  L  N  N  W  G  W  A  G 
                    Query_3356   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACGGCTGCGGACACGGCCGTATACTACTGTGCGACCGACTTGAACAACTGGGGATGGGCAGGG  270
V  90.0% (217/241)  IGHV4-59*01  229  .............................C.................G..T..........-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD7-27*01  3    ------------------------------------------------------------------------.........---------  11

                                      ----------------->                                 
                                       E  G  V  Y  D  V  W  G  Q  G  R  M  V  T  V  S  S 
                    Query_3356   271  GAGGGTGTTTATGATGTCTGGGGCCAAGGGAGAATGGTCACCGTCTCTTCA  321
J  97.5% (39/40)    IGHJ3*01     10   -----------....................C...................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_170784

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            411     5e-117
IGHD3-3*01                                                                                            19.9    0.18  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGCCGTTCCTA	TTTTGGAGTG	ATACGAGAGCTGTGTTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGCCGTTCCTATTTTGGAGTGATACGAGAGCTGTGTTTCTTTGACCAC	ARCRSYFGVIRELCFFDH	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	276	13	0	95.5


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_3357  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  95.5% (276/289)  IGHV1-2*04  6    ..................G.......................................................................  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  N  G  D  T  H  Y  A  L
                    Query_3357  91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAATGGTGACACACATTATGCACT  180
V  95.5% (276/289)  IGHV1-2*04  96   ....................................................................G.....G....A.C.......A  185
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       E  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  K  S  Y  D  T  A
                    Query_3357  181  GGAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAAATCTTACGACACGGC  270
V  95.5% (276/289)  IGHV1-2*04  186  .A........................................................................G....G..........  275
                                       K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                     ------------><----------------------CDR3-IMGT--------------------->                       
                                       G  F  F  W  A  R  C  R  S  Y  F  G  V  I  R  E  L  C  F  F  D  H  W  G  Q  G  T  L  V  T
                    Query_3357  271  CGGGTTTTTCTGGGCGAGATGCCGTTCCTATTTTGGAGTGATACGAGAGCTGTGTTTCTTTGACCACTGGGGCCAGGGAACCCTGGTCAC  360
V  95.5% (276/289)  IGHV1-2*04  276  ..T..A..A...T......-----------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD3-3*01  11   ------------------------------..........--------------------------------------------------  20
J  97.7% (43/44)    IGHJ4*02    5    ---------------------------------------------------------.......T.........................  37

                                                
                                       V  S  S  
                    Query_3357  361  CGTCTCCTCAG  371
J  97.7% (43/44)    IGHJ4*02    38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_170785

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD2-21*01                                                                                           10.3    122   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TGTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTGTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFVQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3358   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTTCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (240/248)  IGHV4-31*03  49   ...............................G..C......C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3358   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCT  180
V  96.8% (240/248)  IGHV4-31*03  139  ..................................G.............C......................C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  V  Q  E 
                    Query_3358   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTTCTCTATTTGTCCAAGAA  270
V  96.8% (240/248)  IGHV4-31*03  229  ..........................C.........................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD2-21*01  22   ---------------------------------------------------------------------------.....----------  26

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_3358   271  AGAGTCTACTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.9% (47/48)    IGHJ4*02     1    -------.....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_170786

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD2-21*01                                                                                           18.0    0.59 
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CAGTTTCTGTCTTAGTTTGGACCGGGGAGT	TTGTGGTGG	N/A	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGGGGAGTTTGTGGTGGTTTTGATATG	ARGSFCLSLDRGVCGGFDM	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  N  G  G  S  L  N  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3359   1    ACCCTGTCCCTCACCTGCGCCGTCAATGGTGGGTCCCTCAATGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAG  90
V  92.2% (226/245)  IGHV4-34*01  49   ....................T...T...........T...G..G.......................................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  Q  S  G  T  T  N  Y  K  P  S  L  K  S  R  V  I  T  S  V  D  T  S  K  N 
                    Query_3359   91   TGGATTGGGGAAATCAATCAAAGTGGCACCACCAACTACAAGCCGTCCCTCAAGAGTCGAGTAATCACATCGGTGGACACGTCCAAGAAT  180
V  92.2% (226/245)  IGHV4-34*01  139  ....................T.....A.G............C....................C.C..T...A..A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  F  C  L  S  L  D  R 
                    Query_3359   181  CAGTTCTCCTTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGG  270
V  92.2% (226/245)  IGHV4-34*01  229  .........C.....C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      ----------------------->                               
                                       G  V  C  G  G  F  D  M  W  G  Q  G  T  M  V  T  V  S  
                    Query_3359   271  GGAGTTTGTGGTGGTTTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTT  325
D  100.0% (9/9)     IGHD2-21*01  7    -----.........-----------------------------------------  15
J  97.6% (40/41)    IGHJ3*02     7    --------------.........C...............................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_170787

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            372     2e-105
IGHD2-15*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TACTGG	ATTGTAGTGGTGCTATCTGCTACT	TCCTGGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAAAGATATACTGGATTGTAGTGGTGCTATCTGCTACTTCCTGGCTTTTGACTCC	TKDILDCSGAICYFLAFDS	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	252	10	9	1	0	90
Total	N/A	N/A	252	245	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3360   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  97.2% (245/252)  IGHV3-9*01   47   .....................................C....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  D  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3360   91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGACAGTATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (245/252)  IGHV3-9*01   137  ..............................GT..C.......................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  F  Y  Y  C  T  K  D  I  L  D  C  S  G  
                    Query_3360   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGTTGAGGACACGGCCTTCTATTACTGTACAAAAGATATACTGGATTGTAGTGGTG  270
V  97.2% (245/252)  IGHV3-9*01   227  ....................................C...............G.........G.........------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  91.7% (22/24)    IGHD2-15*01  6    ------------------------------------------------------------------------------............  17

                                      -IMGT----------------------->                                  
                                      A  I  C  Y  F  L  A  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3360   271  CTATCTGCTACTTCCTGGCTTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  91.7% (22/24)    IGHD2-15*01  18   G..G........---------------------------------------------------  29
J  97.7% (42/43)    IGHJ4*02     6    --------------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_170780

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           10.3    117  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAGGTTTCGATA	GGGGG	G	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAGGTTTCGATAGGGGGGGGTTCGACCCC	ARDRGFDRGGFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3361   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   .......................................A......A..............................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  Y  Y  S  G  S  I  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  M  S  K  N 
                    Query_3361   91   TGGATTGCGTATATCTATTACAGTGGGAGCATCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACATGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*01  139  .......G.......................C...C.....................................T.....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  I  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  G  F  D  R  G  G  F 
                    Query_3361   181  CAGATCTCCCTGAAGTTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATAGAGGTTTCGATAGGGGGGGGTTC  270
V  95.5% (234/245)  IGHV4-59*01  229  ...T...........C................T................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -------------------------------------------------------------------------------.....------  22
J  100.0% (45/45)   IGHJ5*02     7    -------------------------------------------------------------------------------------.....  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3361   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (45/45)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_170782

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           428     3e-122
IGHJ3*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ACCCTCGG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTCGGTGCTCTTGATATC	ARTLGALDI	290	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	72	3	0	96
CDR1-IMGT	77	100	24	24	0	0	100
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	294	284	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  F  S  C  K  A  S  G  Y  T  F  T 
                    Query_3362   2    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGTTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  91
V  96.6% (284/294)  IGHV1-18*01  1    ...G.T...................................................G................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y 
                    Query_3362   92   AGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAATTAT  181
V  96.6% (284/294)  IGHV1-18*01  91   .........................................G.........................C..................C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  L  K  S  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_3362   182  GCACTGAAGTCCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  271
V  96.6% (284/294)  IGHV1-18*01  181  ....A....CT...............................................................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><--------CDR3-IMGT-------->                                  
                                       T  A  V  Y  F  C  A  R  T  L  G  A  L  D  I  W  G  Q  G  A  M  V  S  V  S  S  
                    Query_3362   272  ACGGCCGTGTATTTCTGTGCGAGAACCCTCGGTGCTCTTGATATCTGGGGCCAAGGGGCAATGGTCTCCGTCTCTTCAG  350
V  96.6% (284/294)  IGHV1-18*01  271  .............A..........-------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                        
J  93.6% (44/47)    IGHJ3*02     4    --------------------------------....T....................A........A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_170783

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            364     5e-103
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GTTCA	TACTATGATAATAGTGGTTAT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGTTCATACTATGATAATAGTGGTTATGACTACTATTACGGTATGGACGTC	AKGSYYDNSGYDYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3363   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGAGGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.8% (241/249)  IGHV3-9*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  N  L  G  Y  A  Y  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_3363   91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAACTTAGGCTATGCGTACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAGCGCCA  180
V  96.8% (241/249)  IGHV3-9*01   137  .................................G.A...........G................A...................A.....  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  K  P  E  D  T  A  L  Y  Y  C  A  K  G  S  Y  Y  D  N  S  
                    Query_3363   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAAACCTGAGGACACGGCCTTGTATTACTGTGCAAAAGGTTCATACTATGATAATAGTG  270
V  96.8% (241/249)  IGHV3-9*01   227  .................................G.G.................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  95.2% (20/21)    IGHD3-22*01  5    --------------------------------------------------------------------------..........G.....  20

                                      -IMGT----------------------->                                 
                                      G  Y  D  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3363   271  GTTATGACTACTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  95.2% (20/21)    IGHD3-22*01  21   .....---------------------------------------------------------  25
J  98.2% (55/56)    IGHJ6*02     7    ------.......C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_20201

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           355     3e-100
IGHD4-17*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CCCCCGA	TGACGACGGTGACTAC	CGCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCCCCCGATGACGACGGTGACTACCGCCCTTTTGACAAC	AKAPDDDGDYRPFDN	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3364   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCGGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-23*01  47   ............................................A.............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  R  S  S  G  D  S  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3364   91   AGTGGGTCTCAGGTATTAGAAGTAGTGGTGATAGCACATATTATACAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.6% (238/249)  IGHV3-23*01  137  ............C......TG.........G.........C..CG.............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  A  P  D  D  D  G  D  
                    Query_3364   181  AGAACTCGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATACTACTGTGCGAAAGCCCCCGATGACGACGGTGACT  270
V  95.6% (238/249)  IGHV3-23*01  227  .....A............................................G....T.............---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD4-17*01  1    ----------------------------------------------------------------------------....T.........  14

                                      ---------------->                                  
                                      Y  R  P  F  D  N  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_3364   271  ACCGCCCTTTTGACAACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  321
D  93.8% (15/16)    IGHD4-17*01  15   ..-------------------------------------------------  16
J  95.3% (41/43)    IGHJ4*02     6    --------......T..................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_8435

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           37.2    9e-07
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCTT	CTATGATAGCAGTGGTTATTAC	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCTTCTATGATAGCAGTGGTTATTACCACTTTGACTAT	VVFYDSSGYYHFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	238	1	1	0	0	100
Total	N/A	N/A	238	226	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  A  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3365   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGCCGCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.0% (226/238)  IGHV4-59*01  49   .......................C.......G.T........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3365   91   TGGATTGGTTATATCTATCACAGTGGGACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.0% (226/238)  IGHV4-59*01  139  ........G.........T.........G...............C.............................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  F  Y  D  S  S  G  Y  Y  H 
                    Query_3365   181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGTGGTCTTCTATGATAGCAGTGGTTATTACCAC  270
V  95.0% (226/238)  IGHV4-59*01  229  ...................GC..........................G..T.......--------------------------------  286
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                                  
D  95.5% (21/22)    IGHD3-22*01  7    -----------------------------------------------------------------.........T............---  28
J  93.3% (42/45)    IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_3365   271  TTTGACTATTGGGGCCAGGGAACACTGGTCTCCGTCTCCTCAG  313
J  93.3% (42/45)    IGHJ4*02     6    ........C..............C......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_104899

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           322     2e-90
IGHD2-15*01                                                                                           12.2    31   
IGHJ1*01                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCAGGTCGGG	GGTGGT	N/A	TTCCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCAGGTCGGGGGTGGTTTCCACCAC	AKDQVGGGFHH	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3366   1    GGTCCCTGAGACTCTCCTGTGAAGGCTCTGGATTCACCTTCCGAAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGC  90
V  91.2% (228/250)  IGHV3-30*18  47   .....................C..C................A.T.........................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  S  L  A  V  I  S  Y  D  G  S  N  K  F  Y  A  E  A  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3366   91   AGTCGCTGGCAGTTATTTCATATGATGGAAGTAACAAATTCTATGCAGAGGCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCGA  180
V  91.2% (228/250)  IGHV3-30*18  137  ...G.G..........A.................T....A.........CT.....................................C.  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      R  N  T  L  F  L  Q  I  N  S  V  R  P  E  D  T  A  V  Y  Y  C  A  K  D  Q  V  G  G  G  F  
                    Query_3366   181  GGAACACACTGTTTCTGCAAATCAACAGCGTGAGACCTGAAGACACGGCTGTCTATTACTGTGCGAAAGATCAGGTCGGGGGTGGTTTCC  270
V  91.2% (228/250)  IGHV3-30*18  227  A......G....A.........G......C.....G....G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-15*01  14   --------------------------------------------------------------------------------......----  19
J  93.0% (40/43)    IGHJ1*01     10   --------------------------------------------------------------------------------------....  13

                                      ---->                                  
                                      H  H  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_3366   271  ACCACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  309
J  93.0% (40/43)    IGHJ1*01     14   .G..............C..........C...........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_213986

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD5-12*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGCGGGA	TGGCTAC	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGACAGGTGCGGGATGGCTACCTGACTAC	VTGAGWLPDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	5	2	0	71.4
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  G  Y  Y  L  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3367   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTGGTTATTATTTGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  91.8% (224/244)  IGHV4-59*01  49   ......................................C...A....C..C.G..G.................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  L  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_3367   91   TGGCTTGGTTTGATCTCTTACAGCGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAACAAC  180
V  91.8% (224/244)  IGHV4-59*01  139  ...A....G.AT....A......T.....C........................................................G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  V  T  G  A  G  W  L  P  D  Y  W 
                    Query_3367   181  CAGTTCTCCCTGAAGCTGAGCTCCGTGACCGCTGCGGACACGGCCCTGTATTATTGTGTGACAGGTGCGGGATGGCTACCTGACTACTGG  270
V  91.8% (224/244)  IGHV4-59*01  229  .......................T.....................G.......C....C..G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-12*01  11   ------------------------------------------------------------------------.......-----------  17
J  100.0% (41/41)   IGHJ4*02     8    --------------------------------------------------------------------------------..........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_3367   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (41/41)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_249938

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           282     4e-78
IGHD3-16*02                                                                                           12.2    33   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GATCTCC	TATTGTTAT	GAGCGGGACACGGTTTTCGAGTCGGGCTCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTCCTATTGTTATGAGCGGGACACGGTTTTCGAGTCGGGCTCCCCTTGACCAC	ARSPIVMSGTRFSSRAPLDH	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	213	33	0	86.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  K  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3368   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACCTTCACCAAACATGCCCTGAGTTGGGTCCGACAGGCTCCAGGGAAGGGGCTGC  90
V  86.6% (213/246)  IGHV3-23*01  47   ...............................A........T.G..GCT.....A....C........C.....................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  T  I  S  G  D  G  R  A  T  S  T  L  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3368   91   AGTGGGTCTCAACTATTAGTGGTGATGGTCGTGCCACGTCCACCTTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  86.6% (213/246)  IGHV3-23*01  137  ...........G...........AG....G..AG...A.A.TA.GC............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      M  N  T  L  Y  L  Q  L  N  S  L  R  V  D  D  S  A  L  Y  Y  C  A  R  S  P  I  V  M  S  G  
                    Query_3368   181  TGAACACTTTGTATCTGCAACTGAACAGCCTGAGAGTCGACGACTCGGCCCTGTACTATTGTGCGAGATCTCCTATTGTTATGAGCGGGA  270
V  86.6% (213/246)  IGHV3-23*01  227  A......GC...........A...............C...G...A.....G.A..T..C.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  88.9% (8/9)      IGHD3-16*02  26   -------------------------------------------------------------------------...C.....--------  34

                                      R3-IMGT------------------------>                                  
                                      T  R  F  S  S  R  A  P  L  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3368   271  CACGGTTTTCGAGTCGGGCTCCCCTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  336
J  95.2% (40/42)    IGHJ4*02     7    ------------------------.....T...............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_12159

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            386     1e-109
IGHD2-15*01                                                                                           10.3    128   
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACACA	C	TGTAG	GTGTCCCGGGTCTGCTGA	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACACTGTAGGTGTCCCGGGTCTGCTGAACGGTATGGACGTC	AHTVGVPGLLNGMDV	263	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	25	5	0	83.3
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	111	3	0	97.4
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	269	258	11	0	95.9


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  V  I  T  Y  G  V  G  V  G  W  F  R
                    Query_3369   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCAGTCATTACTTATGGAGTGGGTGTGGGCTGGTTCCG  90
V  95.9% (258/269)  IGHV2-5*01   30   .......................................................C...GC...AG...................A....  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  T  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  N  R  L  T
                    Query_3369   91   TCAGCCCCCAACAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAACAGGCTCAC  180
V  95.9% (258/269)  IGHV2-5*01   120  ..........GG....................................................................G.........  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  L  T  N  V  D  P  V  D  T  A  T  Y  Y  C  A  H  T
                    Query_3369   181  CATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACACTGACCAACGTGGACCCTGTGGACACAGCCACATATTACTGTGCACACAC  270
V  95.9% (258/269)  IGHV2-5*01   210  ........................................A........A.......................................-  298
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                      ----------CDR3-IMGT----------------->                                 
                                        V  G  V  P  G  L  L  N  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3369   271  TGTAGGTGTCCCGGGTCTGCTGAACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  340
D  100.0% (5/5)     IGHD2-15*01  8    .....-----------------------------------------------------------------  12
J  100.0% (47/47)   IGHJ6*02     16   -----------------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_12158

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         402     3e-114
IGHD5-12*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCACAG	TAGTGGCCACG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCACAGTAGTGGCCACGACTACTTTGACTAC	ARLHSSGHDYFDY	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	77	72	70	2	0	97.2
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	106	8	0	93
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	291	274	17	0	94.2


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  R  I  S  C  E  G  S  G  Y  T  F  A  T 
                    Query_3370     6    GTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGCAGTCTCTGAGGATCTCCTGTGAGGGTTCTGGATACACCTTCGCCACC  95
V  94.2% (274/291)  IGHV5-10-1*01  4    ..........................................G....................A...............G...TA...G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  K  I  D  P  S  D  S  Y  T  N  Y  S 
                    Query_3370     96   TATTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAAGATTGATCCTAGTGACTCTTATACCAACTACAGC  185
V  94.2% (274/291)  IGHV5-10-1*01  94   ..C..................................................G.G..................................  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  Q  G  H  V  T  I  S  T  D  N  S  I  T  T  A  Y  L  Q  W  N  S  L  K  A  S  D  T 
                    Query_3370     186  CCGTCCTTCCAAGGCCACGTCACCATCTCAACTGACAATTCCATCACCACTGCCTACCTGCAGTGGAACAGTCTGAAGGCCTCGGACACA  275
V  94.2% (274/291)  IGHV5-10-1*01  184  ..............................G.......G.......G....................G...C.................C  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><--------------CDR3-IMGT-------------->                                  
                                         A  M  Y  Y  C  A  R  L  H  S  S  G  H  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3370     276  GCCATGTATTATTGCGCGAGACTTCACAGTAGTGGCCACGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  363
V  94.2% (274/291)  IGHV5-10-1*01  274  ...........C..T......-------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                    
D  90.9% (10/11)    IGHD5-12*01    8    -----------------------------.......T...------------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02       1    ----------------------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_12152

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           324     8e-91
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	AGCT	CGATTTTTGGACTGGTTATT	TTAGGTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAAGCTCGATTTTTGGACTGGTTATTTTAGGTAACTTTGACTAC	AGSSIFGLVILGNFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  A  Y  Y  W  G  W  I  R  Q  S  S  G  K  G 
                    Query_3371   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTAGCAGTGCTTACTACTGGGGCTGGATCCGCCAGTCCTCAGGGAAGGGG  90
V  91.6% (228/249)  IGHV4-39*01  49   .............................T...........C..T...AG.........................C..C...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  N  T  Y  Y  N  P  S  L  R  S  R  L  H  M  S  V  D  T  S 
                    Query_3371   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAACACCTACTATAATCCGTCCCTCAGGAGTCGACTCCACATGTCCGTAGACACTTCT  180
V  91.6% (228/249)  IGHV4-39*01  139  ..................................G.........C..C..........A.......G..AC...A...........G..C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  I  F  G  L  V 
                    Query_3371   181  AAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCAGACACGGCTGTTTATTACTGTGCGGGAAGCTCGATTTTTGGACTGGTT  270
V  91.6% (228/249)  IGHV4-39*01  229  ...................A.....G...........................G............A..---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-3*01   7    -------------------------------------------------------------------------...........G.....  23

                                      GT------------------>                                  
                                       I  L  G  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3371   271  ATTTTAGGTAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  325
D  95.0% (19/20)    IGHD3-3*01   24   ...----------------------------------------------------  26
J  97.8% (44/45)    IGHJ4*02     4    ----------..................................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_12151

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTCC	AKDNTYSSGYSPLDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  L  R  Q  A  P  G  K  G  P  
                    Query_3372   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGCTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  92.0% (230/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...G........................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  S  G  S  S  T  H  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_3372   91   AGTGGGTCTCAGCGATTACTGGGAGTGGTAGTAGTACACACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  92.0% (230/250)  IGHV3-23*01  137  .............T....G...T......G....C...T.....G......................................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  M  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_3372   181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGTCGAGGACACGGCCATGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  92.0% (230/250)  IGHV3-23*01  227  ...............................G....C.............G.A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3372   271  ATTCACCCCTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  97.6% (41/42)    IGHJ4*02     7    ---------......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_12150

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           382     4e-108
IGHD3-10*01                                                                                           14.1    9.9   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTCCGAAACTAATCCGTCGGAATGACAT	TTATTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTCCGAAACTAATCCGTCGGAATGACATTTATTATTACTACGGTATGGACGTC	ARAPKLIRRNDIYYYYGMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	267	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  I  T  C  K  A  S  G  G  T  F  S  S  Y
                    Query_3373   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGATCACCTGCAAGGCTTCTGGAGGCACCTTCAGCAGTTA  90
V  92.1% (267/290)  IGHV1-69*01  6    ....................................................G..T...............................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  A  W  V  R  Q  A  P  G  Q  G  L  E  W  I  G  G  I  I  P  I  F  D  L  I  T  Y  A  P
                    Query_3373   91   TGCTATCGCCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATTGGAGGCATCATCCCTATCTTTGATTTAATAACCTACGCACC  180
V  92.1% (267/290)  IGHV1-69*01  96   .......AG.......................................G.....G................G.AC.GC..A........A  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        T  L  R  D  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  D  L  S  S  L  R  S  E  D  T  A
                    Query_3373   181  GACGCTGCGGGACAGAGTCACGATTACTGCGGACGAGTCCACCAGCACAGCCTACATGGACCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  92.1% (267/290)  IGHV1-69*01  186  ..A.T.C.A..G...............C........A.....G.................G.............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        V  Y  Y  C  A  R  A  P  K  L  I  R  R  N  D  I  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T
                    Query_3373   271  CGTGTATTACTGTGCGAGAGCTCCGAAACTAATCCGTCGGAATGACATTTATTATTACTACGGTATGGACGTCTGGGGCCAAGGGACCAC  360
V  92.1% (267/290)  IGHV1-69*01  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-10*01  22   ------------------------------------------------.......-----------------------------------  28
J  98.0% (50/51)    IGHJ6*02     12   -------------------------------------------------------...................................  46

                                                      
                                        V  I  V  S  S 
                    Query_3373   361  GGTCATCGTCTCCTCA  376
J  98.0% (50/51)    IGHJ6*02     47   .....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_12157

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD1-26*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TTCCCGTCATC	AGTGGGAGC	CGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTCCCGTCATCAGTGGGAGCCGCGACTAC	AKLPVISGSRDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3374   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTCCTACTGGAGTTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  92.2% (225/244)  IGHV4-59*08  49   ...........................................G..A.........C.................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_3374   91   TGGATCGGATATATCTATTCTAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGCGTCACCATCTCGGTAGACACGTCCAAGAAG  180
V  92.2% (225/244)  IGHV4-59*08  139  .....T..G..........AC..............C.......................A........A..A.................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  K  L  P  V  I  S  G  S  R  D 
                    Query_3374   181  CAGTTCTCCCTGAAACTGAATTCTGTGACCGCCGCAGACTCGGCCGTCTATTACTGTGCGAAACTTCCCGTCATCAGTGGGAGCCGCGAC  270
V  92.2% (225/244)  IGHV4-59*08  229  ..............G....GC..................A.......G.............G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD1-26*01  6    ---------------------------------------------------------------------------.........------  14
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_3374   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   ..............................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_12155

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           375     2e-106
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTA	ACGATTT	ACATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACGATTTACATTATGGTATGGACGTC	ARVNDLHYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3375   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATTCGCCAGCACCCAGGGAAGGGC  90
V  98.0% (245/250)  IGHV4-31*03  49   ...................C................................................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  V  G  Y  M  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3375   91   CTGGAGTGGGTTGGGTACATGTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.0% (245/250)  IGHV4-31*03  139  .........A..........C.....................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  D  L  H  Y  G 
                    Query_3375   181  AAGAACCAGCTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTTAACGATTTACATTATGGT  270
V  98.0% (245/250)  IGHV4-31*03  229  .........T............................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   6    -------------------------------------------------------------------------.......----------  12
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3375   271  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  312
J  100.0% (45/45)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_100964

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           431     4e-123
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ACCCTCGG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTCGGTGCTCTTGATATC	ARTLGALDI	292	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	10	78	69	68	1	0	98.6
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	112	2	0	98.2
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	288	282	6	0	97.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y 
                    Query_3376   10   CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCGTCTGGTTACACCTTTACCGGCTAT  99
V  97.9% (282/288)  IGHV1-18*01  7    .................................................................T..................A.....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_3376   100  GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAATTATGCACAG  189
V  97.9% (282/288)  IGHV1-18*01  97   ...................................G.........................C..................C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3376   190  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  279
V  97.9% (282/288)  IGHV1-18*01  187  ...C......................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------CDR3-IMGT-------->                                  
                                       V  Y  Y  C  A  R  T  L  G  A  L  D  I  W  G  Q  G  A  M  V  T  V  S  S  
                    Query_3376   280  GTGTATTACTGTGCGAGAACCCTCGGTGCTCTTGATATCTGGGGCCAAGGGGCAATGGTCACCGTCTCTTCAG  352
V  97.9% (282/288)  IGHV1-18*01  277  ..................-------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                        
J  95.7% (45/47)    IGHJ3*02     4    --------------------------....T....................A.....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_50285

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_3377   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.9% (279/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_3377   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_3377   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  .......C.....................................C...........G......A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_3377   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.9% (279/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_3377   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_50284

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           318     6e-89
IGHD2-8*01                                                                                            19.9    0.16 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGAGGGTA	ATATTATACTTCTGATGTATGC	CCCGCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCGGAGGGTAATATTATACTTCTGATGTATGCCCCGCCTGACTTC	ARAEGNIILLMYAPPDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  R  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3378   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCGTTCAGTAGATACACCATGAACTGGGTCCGCCAGGCTCCTGGGAAGGGCCTGG  90
V  90.8% (226/249)  IGHV3-21*01  47   ...................................A.C........C..T.G........................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  D  S  N  T  I  Y  Y  T  D  S  V  K  G  R  F  S  I  S  R  D  N  A  
                    Query_3378   91   AGTGGGTCTCATCTATTAGTGGCGATAGTAATACCATATACTACACAGACTCGGTGAAGGGCCGATTCAGCATCTCCAGAGACAACGCCA  180
V  90.8% (226/249)  IGHV3-21*01  137  .............C......A.TAG.....G.TA..........G.......A................C....................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  F  L  Q  M  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  E  G  N  I  I  L  
                    Query_3378   181  AGAACTCACTGTTTCTTCAAATGCACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGCGAGCGGAGGGTAATATTATACTTC  270
V  90.8% (226/249)  IGHV3-21*01  227  ............A...G......A............................G............A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  81.8% (18/22)    IGHD2-8*01   4    ------------------------------------------------------------------------------.....G....AA  15

                                      GT-------------------->                                  
                                      L  M  Y  A  P  P  D  F  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_3378   271  TGATGTATGCCCCGCCTGACTTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  327
D  81.8% (18/22)    IGHD2-8*01   16   ..G.......-----------------------------------------------  25
J  95.1% (39/41)    IGHJ4*02     8    ----------------.....A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_50286

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           413     2e-117
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	276	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  I  F
                    Query_3379   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTTAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTAGCATCTT  90
V  95.8% (276/288)  IGHV5-51*01  6    ...........................G.................................................G.....C..G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  L  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  I  K  Y  S  P
                    Query_3379   91   CTGGCTCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATATCAAATACAGCCC  180
V  95.8% (276/288)  IGHV5-51*01  96   ....A...............................................A........................C..G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  N  T  A
                    Query_3379   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGAACACCGC  270
V  95.8% (276/288)  IGHV5-51*01  186  .............................C....................................................G.......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  *  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3379   271  CATGTAGTACTGTGCGAGGTCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAAGGAACCCTGGTCACCGTCTCCTC  360
V  95.8% (276/288)  IGHV5-51*01  276  ......T...........------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*01     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_3379   361  AG  362
J  100.0% (48/48)   IGHJ4*01     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_50281

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGCCGAAATC	GTATTACGACTTTTGGA	ATCCTTATTCTCGGCTCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCGAAATCGTATTACGACTTTTGGAATCCTTATTCTCGGCTCCTTCGACCCC	ARGGRNRITTFGILILGSFDP	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_3380   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGATCATTATTGGAGCTGGATCCGCCAGTCTCCAGGGAAGGGGCTGGAA  90
V  93.1% (228/245)  IGHV4-34*01  49   ...........................................G.T.C..C..................C.C.................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_3380   91   TGGATTGGGGAGATCAACCATAGTGGAAGCACCAACTACAACCCGTCTCTCAAGAGTCGAGTCACCATATCAGCGGACACGTCTAAGAAC  180
V  93.1% (228/245)  IGHV4-34*01  139  ...........A.....T.............................C.........................TA........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  K  L  I  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  G  R  N  R  I  T  T  F 
                    Query_3380   181  CAGTTCTCCCTGAAGCTGATCTCTGTGACCGCCGCAGACACGGCTGTATATTTCTGTGCGAGAGGGGGCCGAAATCGTATTACGACTTTT  270
V  93.1% (228/245)  IGHV4-34*01  229  ...................G...............G...........G....A............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  94.1% (16/17)    IGHD3-3*01   1    ----------------------------------------------------------------------------.........T....  14

                                      MGT-------------------------->                                  
                                       G  I  L  I  L  G  S  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_3380   271  GGAATCCTTATTCTCGGCTCCTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  334
D  94.1% (16/17)    IGHD3-3*01   15   ...-------------------------------------------------------------  17
J  97.7% (42/43)    IGHJ5*02     9    ---------------------.........................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_50280

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         332     3e-93
IGHD5-12*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGAGGAT	TGGCTACGA	GACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGACCCCCTTTGACCTC	ARAGRIGYETPFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	56	27	26	1	0	96.3
FR2-IMGT	57	107	51	51	0	0	100
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	246	229	17	0	93.1


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  R  L  S  C  T  V  S  G  Y  S  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L  
                    Query_3381     4    CCCTGAGACTCTCCTGCACTGTCTCTGGTTACTCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTGG  93
V  93.1% (229/246)  IGHV4-38-2*02  50   .....TCC...A...................................T..........................................  139
                                           L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K  
                    Query_3381     94   AGTGGATTGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAGA  183
V  93.1% (229/246)  IGHV4-38-2*02  140  .....................A.........C.........A..............A........................C........  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                        N  Q  F  S  S  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  T  
                    Query_3381     184  ACCAGTTCTCGTCGAATCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGAGCGGGGAGGATTGGCTACGAGACCC  273
V  93.1% (229/246)  IGHV4-38-2*02  230  ..........CCT...G....G...........C...............G................------------------------  295
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (9/9)     IGHD5-12*01    11   ----------------------------------------------------------------------------.........-----  19

                                        ---------->                                  
                                        P  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3381     274  CCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  95.5% (42/44)    IGHJ4*02       5    -.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_50283

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            341     5e-96
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCCACCCGAAAA	TATGACAGTAGTGATTATT	CCTCCCCCCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCACCCGAAAATATGACAGTAGTGATTATTCCTCCCCCCTCTTTGACTAC	STRKYDSSDYSSPLFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	108	6	0	94.7
Total	N/A	N/A	240	229	11	0	95.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  T  N  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_3382   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTACTAACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.4% (229/240)  IGHV4-4*02   49   ..............................................G...........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  R  G  G  S  P  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  K 
                    Query_3382   91   GAGTGGATTGGGGAAATCTATCGTGGTGGGAGCCCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCACTAGACAAGTCCAAA  180
V  95.4% (229/240)  IGHV4-4*02   139  ......................A.A........A.....................................A...G.............G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  S  T  R  K  Y  D  S  S  D  Y 
                    Query_3382   181  AACCAGTTCTCCCTGCGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTTCCACCCGAAAATATGACAGTAGTGATTAT  270
V  95.4% (229/240)  IGHV4-4*02   229  ...............AA.....G.....................................------------------------------  288
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  89.5% (17/19)    IGHD3-22*01  8    ------------------------------------------------------------------------.....T.......G....  25

                                      -------------------->                                  
                                       S  S  P  L  F  D  Y  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_3382   271  TCCTCCCCCCTCTTTGACTACCGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  89.5% (17/19)    IGHD3-22*01  26   .------------------------------------------------------  26
J  97.7% (43/44)    IGHJ4*02     5    -----------..........T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_50282

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           419     2e-119
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCGTCCTGTAAAATATGGC	ACTATGAAAGTATTGGTTA	CTGTGGGTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCGTCCTGTAAAATATGGCACTATGAAAGTATTGGTTACTGTGGGTTCTTTGACTAC	ARDPSCKIWHYESIGYCGFFDY	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  S  F  T  S  N 
                    Query_3383   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTACCAGCAAC  91
V  96.2% (279/290)  IGHV1-18*04  7    .................................................A..........................C..........T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  T  Y  N  G  N  T  K  Y  V  P 
                    Query_3383   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGATGGATCAGCACTTACAATGGTAACACAAAATATGTACCG  181
V  96.2% (279/290)  IGHV1-18*04  97   .....................................T......................G...................C....C..A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  S  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3383   182  AAGCTCCAGGGCAGAGTCACCATGACCTCAGACACATCCACGAGCACAGCCTACATGGAACTGAGGAGCCTGAGATCTGACGATACGGCC  271
V  96.2% (279/290)  IGHV1-18*04  187  ...........................A...............................G.......................C......  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------------CDR3-IMGT--------------------------->            
                                       V  Y  Y  C  A  R  D  P  S  C  K  I  W  H  Y  E  S  I  G  Y  C  G  F  F  D  Y  W  G  Q  G 
                    Query_3383   272  GTGTATTACTGTGCGAGAGACCCGTCCTGTAAAATATGGCACTATGAAAGTATTGGTTACTGTGGGTTCTTTGACTACTGGGGCCAGGGA  361
V  96.2% (279/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  89.5% (17/19)    IGHD3-22*01  6    ----------------------------------------.......T....G......-------------------------------  24
J  100.0% (44/44)   IGHJ4*02     5    --------------------------------------------------------------------......................  26

                                                            
                                       T  L  V  T  V  S  S  
                    Query_3383   362  ACCCTGGTCACCGTCTCCTCAG  383
J  100.0% (44/44)   IGHJ4*02     27   ......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_287116

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_3384   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTACTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  93.9% (229/244)  IGHV4-59*01  49   ........................................G..G.T..................................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_3384   91   TGGATTGGATATATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  93.9% (229/244)  IGHV4-59*01  139  ........G...................G.....A............................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W 
                    Query_3384   181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGG  270
V  93.9% (229/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------------------------------------------....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_3384   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (35/35)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_287117

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           346     2e-97
IGHD5-18*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCGAGCGGATCGGCTAGAAC	ACACCTATGGT	GAAACGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCGAGCGGATCGGCTAGAACACACCTATGGTGAAACGTACTACTTTGACTCC	ARHRADRLEHTYGETYYFDS	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3385   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*08  49   ........................................G....T............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  S  G  S  T  T  Y  N  P  S  L  E  G  R  A  T  I  S  A  D  T  S  K  N 
                    Query_3385   91   TGGATTGGCTATCTCTATTACAGTGGGAGCACCACCTACAACCCCTCCCTCGAGGGTCGAGCCACCATATCAGCAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*08  139  ........G...A.....................A................A..A......T...........T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  R  A  D  R  L  E  H  T 
                    Query_3385   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCAGACACGGCCGTTTATTACTGTGCGAGACATCGAGCGGATCGGCTAGAACACACC  270
V  95.1% (233/245)  IGHV4-59*08  229  .............A.....G...........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.9% (10/11)    IGHD5-18*01  7    -------------------------------------------------------------------------------------...G.  11

                                      GT------------------------>                                  
                                       Y  G  E  T  Y  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3385   271  TATGGTGAAACGTACTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  90.9% (10/11)    IGHD5-18*01  12   ......-------------------------------------------------------  17
J  97.9% (47/48)    IGHJ4*02     1    -------------............A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_287114

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           251     8e-69
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGC	GGTATAGTAGTGG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGCGGTATAGTAGTGGCTACTACTACGCTATGGTCGTC	ARPRYSSGYYYAMVV	237	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	18	6	0	75
FR2-IMGT	48	98	51	46	5	0	90.2
CDR2-IMGT	99	122	24	18	6	0	75
FR3-IMGT	123	236	114	96	18	0	84.2
CDR3-IMGT (germline)	237	242	6	6	0	0	100
Total	N/A	N/A	230	195	35	0	84.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  S  F  G  D  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  A  I  
                    Query_3386   13   GTGCAGCCTCTGGATTCAGCTTCGGCGACTTTGGCATGCACTGGGTCCGCCAGGCCCCTGGCAAGGGGCTGGAGTGGGTAGGAGCTATCT  102
V  84.8% (195/230)  IGHV3-30*03  65   ..................C....A.TAG..A........................T..A....................G.C..T...A.  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  Y  D  G  K  Y  K  F  Y  R  D  S  L  K  G  R  F  T  I  S  R  D  N  F  E  K  T  V  F  L  
                    Query_3386   103  CATATGACGGCAAATATAAATTCTATAGAGACTCTCTGAAGGGCCGCTTCACCATCTCCAGAGACAACTTCGAGAAGACAGTGTTTCTGG  192
V  84.8% (195/230)  IGHV3-30*03  155  .......T..A.GTA......A....GC......CG..........A....................T.C.A....C..GC...A....C  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      E  M  K  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  P  R  Y  S  S  G  Y  Y  Y  A  M  V  V  
                    Query_3386   193  AAATGAAGAGTCTGAGACCTGAGGACACGGCTGTCTATTACTGTGCGAGACCGCGGTATAGTAGTGGCTACTACTACGCTATGGTCGTCT  282
V  84.8% (195/230)  IGHV3-30*03  245  .......C..C......G................G...............----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  92.3% (12/13)    IGHD6-19*01  2    ------------------------------------------------------.......C.....-----------------------  14
J  96.4% (53/55)    IGHJ6*02     8    -------------------------------------------------------------------...........G.....A.....  30

                                                                      
                                      W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3386   283  GGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  96.4% (53/55)    IGHJ6*02     31   ................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_287115

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           282     4e-78
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	217	27	6	86.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_3387   4    CCCTGAGACTCTCCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.8% (217/250)  IGHV4-34*01  50   .....TCC...A..........C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_3387   94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.8% (217/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_3387   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.8% (217/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_3387   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_287112

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           325     2e-91
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	104	10	0	91.2
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3388   1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.0% (225/242)  IGHV3-33*03  47   ....................G................C..C.....C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  F  R  D  D  S  
                    Query_3388   91   AGTGGGTGGCAGTTATATGGTATGATGGAATTAAGAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTTCAGAGACGACTCCA  180
V  93.0% (225/242)  IGHV3-33*03  137  ..............................G...T........................................C.......A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  D  G  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_3388   181  AGAACACCCTGTTTCTGCAGATGGACGGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCG  270
V  93.0% (225/242)  IGHV3-33*03  227  .......G....A......A...A..A.......................G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  90.9% (10/11)    IGHD6-13*01  7    -------------------------------------------------------------------....G......------------  17
J  97.8% (45/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_3388   271  ACCCCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  309
J  97.8% (45/46)    IGHJ5*02     13   .....................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_50288

Length=412
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            422     3e-120
IGHD3-22*01                                                                                           19.9    0.19  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTCCTCC	TATTACTTTGATA	CTACTGTGACTGAGCCGAATGAA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCTCCTCCTATTACTTTGATACTACTGTGACTGAGCCGAATGAATACTACCAGTACGGCCTGGACGTC	ASSSYYFDTTVTEPNEYYQYGLDV	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	279	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  E  V  S  C  K  A  F  G  Y  S  F  T  G  Y
                    Query_3389   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTAGAGGTCTCCTGCAAGGCTTTTGGATACAGCTTCACCGGCTA  90
V  96.9% (279/288)  IGHV1-2*04   6    ..................G.............................GA..................C........C............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_3389   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGCCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  96.9% (279/288)  IGHV1-2*04   96   ....................................G.....................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  F  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_3389   181  GAAATTTCAGGGCTGGGTCACCATGACCAGGGACACGTTCATCAGCACAGCCTACATGGAGCTGAGCAGGCTCAGATCTGACGACACGGC  270
V  96.9% (279/288)  IGHV1-2*04   186  ...G..................................C.................................G.................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-------------------------------CDR3-IMGT------------------------------>     
                                        V  Y  Y  C  A  S  S  S  Y  Y  F  D  T  T  V  T  E  P  N  E  Y  Y  Q  Y  G  L  D  V  W  G
                    Query_3389   271  CGTGTATTACTGTGCGAGCTCCTCCTATTACTTTGATACTACTGTGACTGAGCCGAATGAATACTACCAGTACGGCCTGGACGTCTGGGG  360
V  96.9% (279/288)  IGHV1-2*04   276  ..................------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  92.3% (12/13)    IGHD3-22*01  2    -------------------------.......A.....----------------------------------------------------  14
J  93.0% (53/57)    IGHJ6*02     6    -------------------------------------------------------------......T.C.....TA.............  34

                                                                  
                                        Q  G  T  T  V  T  V  S  S 
                    Query_3389   361  CCAAGGGACCACGGTCACCGTCTCCTCA  388
J  93.0% (53/57)    IGHJ6*02     35   ............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40393728


Query= Query_287111

Length=413
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            392     2e-111
IGHD3-3*01                                                                                            23.8    0.013 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAGTATGGTTCGGGTG	GATTTTCGGAGTGGT	CCCCCTTCTACTTCAG	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGAGTATGGTTCGGGTGGATTTTCGGAGTGGTCCCCCTTCTACTTCAGCGGTTTGGACGTC	ARDEYGSGGFSEWSPFYFSGLDV	289	357	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	19	5	0	79.2
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	273	22	0	92.5


Alignments

                                     <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                        V  Q  L  V  Q  S  G  G  G  L  V  Q  P  G  G  S  P  R  L  S  C  A  A  S  G  F  S  F  S  
                    Query_3390  2    AGGTGCAGCTGGTGCAGTCTGGAGGAGGCTTGGTCCAGCCTGGGGGGTCCCCGAGACTCTCCTGTGCAGCCTCTGGATTTAGTTTTAGTA  91
V  92.5% (273/295)  IGHV3-7*03  2    ..............G.......G............................T...........................C.CC.......  91
                                        V  Q  L  V  E  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  

                                     T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                     S  H  W  M  S  W  V  R  Q  A  P  G  K  G  P  E  W  V  A  S  I  V  Q  D  G  T  K  R  Y  Y  
                    Query_3390  92   GCCATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGGAGTGGGTGGCCAGCATAGTGCAAGATGGAACTAAGAGATATTACG  181
V  92.5% (273/295)  IGHV3-7*03  92   ..T..........C............................T..............A....AA...........G.G...A...C..T.  181
                                     S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  

                                     ----------------------------------------------FR3-IMGT------------------------------------
                                     V  D  S  V  K  G  R  F  T  I  S  R  D  N  G  E  N  S  L  Y  L  Q  M  N  S  L  R  G  D  D  
                    Query_3390  182  TGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGGCGAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGGCGACGACA  271
V  92.5% (273/295)  IGHV3-7*03  182  ..........................................C.A....................................C...G....  271
                                     V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  

                                     ----------------><-----------------------------CDR3-IMGT----------------------------->    
                                     T  A  V  Y  Y  C  A  R  D  E  Y  G  S  G  G  F  S  E  W  S  P  F  Y  F  S  G  L  D  V  W  
                    Query_3390  272  CGGCCGTCTATTACTGTGCGAGAGATGAGTATGGTTCGGGTGGATTTTCGGAGTGGTCCCCCTTCTACTTCAGCGGTTTGGACGTCTGGG  361
V  92.5% (273/295)  IGHV3-7*03  272  .......G.................-----------------------------------------------------------------  296
                                     T  A  V  Y  Y  C  A  R                                                                    
D  93.3% (14/15)    IGHD3-3*01  8    ------------------------------------------......T........---------------------------------  22
J  97.8% (45/46)    IGHJ6*02    17   -------------------------------------------------------------------------....A............  33

                                                                  
                                     G  Q  G  T  T  V  T  V  S  S 
                    Query_3390  362  GCCAAGGGACCACGGTCACCGTCTCCTCA  390
J  97.8% (45/46)    IGHJ6*02    34   .............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40498920


Query= Query_118070

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*04                                                                                           380     1e-107
IGHD1-26*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*04	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGGGTCCT	TATAGTGGGAGC	CCGCAAGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACTTC	AKPGPYSGSPQGYFDF	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	16	8	0	66.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  A  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  F
                    Query_3391   1    GCAGCTGGTGCAGTCTGGAGGAGCCTTAGTGCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTT  90
V  92.0% (266/289)  IGHV3-23*04  6    ..........G.......G....G...G..A.......................................................G..A  95
                                        Q  L  V  E  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I  T  E  T  G  R  N  S  Y  Y  A  D
                    Query_3391   91   CGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAACTATTACTGAGACTGGTCGTAATTCATACTACGCAGA  180
V  92.0% (266/289)  IGHV3-23*04  96   T........C..........................................G......G..GT.G....G...GCA.............  185
                                        A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  I  I  S  R  D  K  S  K  N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A
                    Query_3391   181  CTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCAAGAACACACTGTATCTGCAAATGAACACCCTGAGAGCCGAGGACACGGC  270
V  92.0% (266/289)  IGHV3-23*04  186  ...............G....C...............T...........G...................G.....................  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  K  P  G  P  Y  S  G  S  P  Q  G  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S
                    Query_3391   271  CGTATATTACTGTGCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTC  360
V  92.0% (266/289)  IGHV3-23*04  276  ...................-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  K                                                                        
D  100.0% (12/12)   IGHD1-26*01  3    ----------------------------............--------------------------------------------------  14
J  97.8% (45/46)    IGHJ4*02     3    -------------------------------------------------..........A..............................  43

                                           
                                        S  
                    Query_3391   361  CTCAG  365
J  97.8% (45/46)    IGHJ4*02     44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_118071

Length=410
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           382     4e-108
IGHD6-25*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTC	GGGTTTACCAGCGGCT	TGGACGGCTTTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTCGGGTTTACCAGCGGCTTGGACGGCTTTGACTACTACTACGCTATGGACGTC	ARDVGFTSGLDGFDYYYAMDV	292	354	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	10	78	69	65	4	0	94.2
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	105	9	0	92.1
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	290	267	23	0	92.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  D  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  N  S 
                    Query_3392   10   CAGCTGGTGCAGTCTGGAGGTGACGTGAAGAAGCCGGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTTAGCAACTCT  99
V  92.1% (267/290)  IGHV1-18*01  7    ...................C...G...........T.............................T................C..G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  V  P  G  Q  G  L  E  W  M  G  W  I  S  T  Y  N  G  N  T  N  Y  A  Q 
                    Query_3392   100  GGCATCAACTGGGTGCGACAGGTCCCTGGACAAGGGCTAGAGTGGATGGGCTGGATCAGCACTTACAATGGAAACACAAATTATGCACAG  189
V  92.1% (267/290)  IGHV1-18*01  97   ..T....G..............C...............T...........A.........G..........T........C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  L  T  M  A  M  D  T  S  T  S  T  V  Y  M  E  L  T  S  L  R  S  D  D  S  A 
                    Query_3392   190  AACCTCCAGGGCAGACTCACCATGGCCATGGACACATCCACGAGCACAGTCTACATGGAGCTGACGAGCCTGAGATCTGACGACTCGGCC  279
V  92.1% (267/290)  IGHV1-18*01  187  ..G............G........A...CA...................C..............G...................A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------------CDR3-IMGT-------------------------->               
                                       V  Y  Y  C  A  R  D  V  G  F  T  S  G  L  D  G  F  D  Y  Y  Y  A  M  D  V  W  G  Q  G  T 
                    Query_3392   280  GTGTATTACTGTGCGAGAGATGTCGGGTTTACCAGCGGCTTGGACGGCTTTGACTACTACTACGCTATGGACGTCTGGGGCCAAGGGACC  369
V  92.1% (267/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  87.5% (14/16)    IGHD6-25*01  1    ------------------------....A..G........--------------------------------------------------  16
J  96.4% (54/56)    IGHJ6*02     7    ----------------------------------------------------............G.........................  44

                                                        
                                       P  V  T  V  S  S 
                    Query_3392   370  CCGGTCACCGTCTCCTCA  387
J  96.4% (54/56)    IGHJ6*02     45   A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40183344


Query= Query_118072

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           355     3e-100
IGHD3-9*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              62.2    6e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	CCGAG	TGACTGGTTATTATA	GCGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGCCGAGTGACTGGTTATTATAGCGGC	ASRVTGYYSG	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3393   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAACTACTGGATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (237/247)  IGHV3-74*01  47   .............................................G........................A...................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  Y  G  T  T  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3393   91   TGTGGGTCTCACGTATCAATAGTTATGGGACTACCACAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (237/247)  IGHV3-74*01  137  ................T......G......G..G.....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  R  V  T  G  Y  Y  S  
                    Query_3393   181  AGAACACGCTGTATCTGCAGATGAACAGTCTGAGAGCCGAGGACACGGCTGTATACTACTGTGCAAGCCGAGTGACTGGTTATTATAGCG  270
V  96.0% (237/247)  IGHV3-74*01  227  ...................A................................G..T...........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (15/15)   IGHD3-9*01   15   ------------------------------------------------------------------------...............---  29

                                      ->                                  
                                      G  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3393   271  GCTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  306
J  97.1% (34/35)    IGHJ4*02     14   -..................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_57777

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           322     2e-90
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCC	ACTGGGGA	GTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCCACTGGGGAGTGGCTACTTTGACCAC	ARGPLGSGYFDH	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	226	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  T  N  Y  M  N  W  V  R  Q  V  P  G  K  G  L  
                    Query_3394   1    GGTCCCTGAGACTCTCCTGTGCCGCCTCTGGGTTTACCGTCAGCACCAATTACATGAACTGGGTCCGCCAGGTTCCAGGGAAGGGGCTCG  90
V  91.9% (226/246)  IGHV3-53*01  47   ......................A...........C........T.G...C.......G..............C...............G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  T  A  G  G  T  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  D  S  T  
                    Query_3394   91   AGTGGGTCTCAGTTATTTATACCGCTGGTGGCACATACTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGATTCGACGA  180
V  91.9% (226/246)  IGHV3-53*01  137  .....................G..G....A..........C.C.....................................A....C.A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  T  V  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  P  L  G  S  G  Y  F  
                    Query_3394   181  ACACAGTGTATCTCCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTGTATTACTGTGCGAGAGGTCCACTGGGGAGTGGCTACTTTG  270
V  91.9% (226/246)  IGHV3-53*01  227  ....GC.......T...................C................................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD7-27*01  4    ----------------------------------------------------------------------........------------  11
J  95.7% (45/47)    IGHJ4*02     2    ----------------------------------------------------------------------------------........  9

                                      ---->                                  
                                      D  H  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_3394   271  ACCACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  309
J  95.7% (45/47)    IGHJ4*02     10   ..T.............................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_118074

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	RELLWC*LQTTLTT	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	242	114	112	1	1	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	250	245	4	1	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3395   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.0% (245/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P   S  S  R  V  D  L  P  Y  Q  *  T  R  L
                    Query_3395   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGT-CCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  179
V  98.0% (245/250)  IGHV4-31*03  139  ...............T......A.............................C.............G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                        R  T  S  S  P  *  S  *  A  L  *  L  P  R  T  R  P  C  I  T  V  R  E  L  L  W  C  *  L  Q
                    Query_3395   180  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  269
V  98.0% (245/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                        T  T  L  T  T  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_3395   270  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_280469

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           367     5e-104
IGHD3-3*01                                                                                            27.6    7e-04 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	TTTACGAT	TTTTTTGAGTGGTTATT	N/A	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATTTACGATTTTTTTGAGTGGTTATTACTTC	AIYDFFEWLLL	238	271	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	238	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3396   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (238/241)  IGHV4-34*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3396   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTGAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (238/241)  IGHV4-34*01  139  ..................................................C.......................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><------------CDR3-IMGT-----------
                                       Q  F  S  L  K  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  I  Y  D  F  F  E  W  L  L  L 
                    Query_3396   181  CAGTTCTCCCTGAAACTGAGCTCTCTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGATTTACGATTTTTTTGAGTGGTTATTACTT  270
V  98.8% (238/241)  IGHV4-34*01  229  ..............G.........G....................................-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  94.1% (16/17)    IGHD3-3*01   10   ---------------------------------------------------------------------.....G...........----  26
J  97.4% (38/39)    IGHJ4*02     10   --------------------------------------------------------------------------------------...A  13

                                      >                                  
                                       L  G  P  G  N  P  G  H  R  L  L   
                    Query_3396   271  CTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  305
J  97.4% (38/39)    IGHJ4*02     14   ...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_280468

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            386     1e-109
IGHD6-19*01                                                                                           21.8    0.045 
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACC	GGGTGTAGCAATGGCTG	ATTTATC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAACCGGGTGTAGCAATGGCTGATTTATCCTATTACTACGGTCTGGACGTC	AREPGVAMADLSYYYGLDV	269	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	154	27	25	2	0	92.6
FR3-IMGT	155	268	114	109	5	0	95.6
CDR3-IMGT (germline)	269	276	8	8	0	0	100
Total	N/A	N/A	275	261	14	0	94.9


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  I  S  R  N  T  D  A  W  N  W  I  R 
                    Query_3397   2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTATCTCTCGCAACACTGATGCTTGGAACTGGATCAGG  91
V  94.9% (261/275)  IGHV6-1*01   31   ........G...T.G.......................................G.....A......G..C...................  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  K  S  K  W  Y  Y  D  Y  A  V  S  V  K  S  R 
                    Query_3397   92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAAGTCCAAGTGGTATTATGATTATGCAGTATCTGTGAAAAGTCGA  181
V  94.9% (261/275)  IGHV6-1*01   121  ..............................................G.............A.............................  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  I  N  P  D  T  S  K  N  Q  F  P  L  H  L  S  S  V  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_3397   182  ATTACCATCAACCCCGACACATCCAAGAACCAGTTCCCCCTGCATCTGAGCTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCA  271
V  94.9% (261/275)  IGHV6-1*01   211  ..A...........A.....................T.......G....A........................................  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      ---------------------CDR3-IMGT----------------------->                                 
                                       R  E  P  G  V  A  M  A  D  L  S  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3397   272  AGAGAACCGGGTGTAGCAATGGCTGATTTATCCTATTACTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  358
V  94.9% (261/275)  IGHV6-1*01   301  .....----------------------------------------------------------------------------------  305
                                       R                                                                                     
D  88.2% (15/17)    IGHD6-19*01  1    --------....A.....G......--------------------------------------------------------------  17
J  96.4% (53/55)    IGHJ6*02     8    --------------------------------...C.........A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_280467

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*11                                                                                           396     2e-112
IGHD2-2*01                                                                                            16.1    2.6   
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*11	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCCACCCGCTG	TTGTACTTCTACCAACTGCT	GCAGGGGGGA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCCACCCGCTGTTGTACTTCTACCAACTGCTGCAGGGGGGAACAACTGGTTCGACCCC	ARGPPAVVLLPTAAGGNNWFDP	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	271	18	0	93.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  D  T  F  S  S  Y 
                    Query_3398   2    CAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGTAAGGCTTCTGGAGACACCTTCAGCAGCTAT  91
V  93.8% (271/289)  IGHV1-69*11  7    .................................................A.........C.............G................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  L  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  T  I  I  P  V  L  G  T  A  N  Y  A  Q 
                    Query_3398   92   GGTCTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTGGAGTGGATGGGAACCATCATCCCTGTCCTTGGTACAGCGAACTACGCACAG  181
V  93.8% (271/289)  IGHV1-69*11  97   .C.A..................................T.............GG.........A.............A............  186
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  T  A  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  F  Q  G  R  L  T  M  T  A  D  V  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3398   182  AGGTTCCAGGGCAGACTCACGATGACCGCGGACGTTTCCACGAGCACAGCCTACATGGAGCTGAGAAGCCTAAGATCTGACGACACGGCC  271
V  93.8% (271/289)  IGHV1-69*11  187  .A.............G.......T..........AA.............................C.....G........G.........  276
                                       K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><----------------------------CDR3-IMGT--------------------------->            
                                       V  Y  Y  C  A  R  G  P  P  A  V  V  L  L  P  T  A  A  G  G  N  N  W  F  D  P  W  G  Q  G 
                    Query_3398   272  GTGTATTACTGTGCGAGAGGTCCACCCGCTGTTGTACTTCTACCAACTGCTGCAGGGGGGAACAACTGGTTCGACCCCTGGGGCCAGGGA  361
V  93.8% (271/289)  IGHV1-69*11  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  80.0% (16/20)    IGHD2-2*01   7    -------------------------------.....G.AG.....G.....---------------------------------------  26
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------.............................  29

                                                            
                                       T  L  V  T  V  S  S  
                    Query_3398   362  ACCCTGGTCACCGTCTCCTCAG  383
J  100.0% (51/51)   IGHJ5*02     30   ......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_280466

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         346     2e-97
IGHD2-2*02                                                                                            35.3    4e-06
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	GGATATTGTAGTGGTATCAGGTGCTTTACC	GGGGTAG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGGATATTGTAGTGGTATCAGGTGCTTTACCGGGGTAGGGTTCGACCCC	AREGYCSGIRCFTGVGFDP	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	30	25	2	3	83.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	251	238	10	3	94.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  S  V  S  G  D  S  I  S  S  G     Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_3399     1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGCAGTGGG---TACTCCTGGAGCTGGATCCGGCAGCCACCGGGGAAGGGC  87
V  94.8% (238/251)  IGHV4-30-2*01  49   ..................G............G...............TGGT.............................A.........  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  R  S 
                    Query_3399     88   CTGGAGTGGATTGGGTACATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCATTAGACAGGTCC  177
V  94.8% (238/251)  IGHV4-30-2*01  139  ..........................................................................A...G...........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                         T  N  Q  V  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  Y  C  S  G  I 
                    Query_3399     178  ACGAACCAGGTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTACTGTGCCAGAGAGGGATATTGTAGTGGTATC  267
V  94.8% (238/251)  IGHV4-30-2*01  229  .A.......T................C.............................T..............-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.7% (26/30)    IGHD2-2*02     2    ------------------------------------------------------------------------............A...C.  19

                                        3-IMGT----------------------->                                  
                                         R  C  F  T  G  V  G  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3399     268  AGGTGCTTTACCGGGGTAGGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  86.7% (26/30)    IGHD2-2*02     20   ..C....A....----------------------------------------------------  31
J  100.0% (45/45)   IGHJ5*02       7    -------------------.............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_52027

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           300     8e-84
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	218	26	0	89.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  L  N  S  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3400   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGACTCCTTGAATAGTTACTTCTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  89.3% (218/244)  IGHV4-59*01  49   .............................T.G....A.C.G........A.....G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  D  S  E  T  T  K  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  T  N 
                    Query_3400   91   TGGATTGGCTATATCTATGACAGTGAGACCACCAAGTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCACGAAT  180
V  89.3% (218/244)  IGHV4-59*01  139  ........G.........T......G..G......C........C...............G.......A..........C.....A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G  W  L 
                    Query_3400   181  GAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTT  270
V  89.3% (218/244)  IGHV4-59*01  229  C.GT..........G....GC...........T..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD6-19*01  6    --------------------------------------------------------------------------.............---  18
J  95.0% (38/40)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                
                                       D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_3400   271  GACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  308
J  95.0% (38/40)    IGHJ4*02     9    ....A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_280463

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           318     6e-89
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GTTAGGGGGAG	AGGACCAATGGGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTAGGGGGAGAGGACCAATGGGGGGACTACCTTGACCGC	ARLGGEDQWGDYLDR	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	222	19	0	92.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  S  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  E  K  G  L  E  
                    Query_3401   4    CCCTGAGACTCTCCTGTACTGTGTCTAGTGGCTCCATCAGCAGTTACTACTGGAGTTGGATCCGGCAGTCCCCAGAGAAGGGACTGGAGT  93
V  92.1% (222/241)  IGHV4-59*08  50   .....TCC...A....C.....C...G.............T..............C............C......G..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  N  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  A  S  E  N  
                    Query_3401   94   GGATTGGATATATCAACTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACGCGTCCGAGAACC  183
V  92.1% (222/241)  IGHV4-59*08  140  .......G......T.T............................................................A.....A......  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  G  G  E  D  Q  W  G  D  
                    Query_3401   184  AGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCCTGTATTATTGTGCGAGGTTAGGGGGAGAGGACCAATGGGGGGACT  273
V  92.1% (222/241)  IGHV4-59*08  230  ..................G.........................G.......C........-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  90.9% (10/11)    IGHD3-16*01  14   -------------------------------------------------------------...T.......------------------  24
J  93.8% (45/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  L  D  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3401   274  ACCTTGACCGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  93.8% (45/48)    IGHJ4*02     4    ..T.....TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_57779

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3402   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  98.4% (239/243)  IGHV4-59*01  49   ......................................................................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3402   91   TGGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  .........T................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_3402   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (18/20)    IGHD5-18*01  1    ----------------------------------------------------------------..........C.....T...------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3402   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_280460

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD3-22*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTTTG	ACTATGATAGTAGTGGT	ACTTACCACGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTTGACTATGATAGTAGTGGTACTTACCACGTTTTTGACTAC	ARFDYDSSGTYHVFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	235	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3403   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (235/242)  IGHV4-59*01  49   ..............................................A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  N 
                    Query_3403   91   TGGATTGGATATATCTATTACAGTGGCAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCCAGGAAC  180
V  97.1% (235/242)  IGHV4-59*01  139  ........G.................G..C..........................................G............A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  D  Y  D  S  S  G  T  Y 
                    Query_3403   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTTTGACTATGATAGTAGTGGTACTTAC  270
V  97.1% (235/242)  IGHV4-59*01  229  ....................C.........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (17/17)   IGHD3-22*01  6    -------------------------------------------------------------------.................------  22

                                      -------------->                                  
                                       H  V  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3403   271  CACGTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_218815

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           419     2e-119
IGHD3-16*01                                                                                           12.2    36    
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGA	AATTGGTAACACCTAATTGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTC	ARRGKLVTPNWDYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	278	10	0	96.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_3404   2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAC  91
V  96.5% (278/288)  IGHV1-18*04  7    ...................C.................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  C  Y  N  G  N  T  K  Y  A  L 
                    Query_3404   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGTTGTTACAATGGTAACACAAAGTATGCACTG  181
V  96.5% (278/288)  IGHV1-18*04  97   ...........................................................CGC..................C.......A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  H  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3404   182  AAGCACCAGGGCAGAGTCACCATGACCACAGACACATCGACGAGCACAGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.5% (278/288)  IGHV1-18*04  187  ....T.................................C..............C....................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------CDR3-IMGT-------------------->                           
                                       V  Y  Y  C  A  R  R  G  K  L  V  T  P  N  W  D  Y  G  M  D  V  W  G  Q  G  A  T  V  T  V 
                    Query_3404   272  GTGTATTACTGTGCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTCTGGGGCCAAGGGGCCACGGTCACCGTC  361
V  96.5% (278/288)  IGHV1-18*04  277  ..................------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD3-16*01  18   -------------------......-----------------------------------------------------------------  23
J  98.0% (49/50)    IGHJ6*02     13   ----------------------------------------------.............................A..............  56

                                            
                                       S  S 
                    Query_3404   362  TCCTCA  367
J  98.0% (49/50)    IGHJ6*02     57   ......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_330559

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         355     4e-100
IGHD3-10*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CATGGA	GGTCCGGGGAATTA	CCAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACATGGAGGTCCGGGGAATTACCAGTTTGACTAC	ARHGGPGNYQFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	96	18	0	84.2
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	258	31	0	89.3


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  D  T  K
                    Query_3405     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAGGATCTCCTGTAAGGCTTCTGGATACAGTTTTGACACCAA  90
V  89.3% (258/289)  IGHV5-10-1*01  6    ..............................A........G.........................G............C...AC..G.T.  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  H  Y  N  S
                    Query_3405     91   GTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATAGATCCCAGTGACTCTTATACCCATTACAACTC  180
V  89.3% (258/289)  IGHV5-10-1*01  96   C.......G................................................T.....T...............A.C....G.C.  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  S  Q  G  H  V  T  I  S  V  D  R  S  T  T  T  A  Y  M  Q  W  T  S  L  E  A  S  D  S  G
                    Query_3405     181  GTCCTCCCAAGGACACGTCACCATCTCGGTTGACAGGTCCACCACCACTGCCTACATGCAGTGGACCAGCCTGGAGGCCTCGGACAGCGG  270
V  89.3% (258/289)  IGHV5-10-1*01  186  .....T......C..............A.C.....A.....T..G..........C.........G.......A............C..C  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          I  Y  F  C  A  R  H  G  G  P  G  N  Y  Q  F  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_3405     271  CATTTATTTCTGTGCGCGACATGGAGGTCCGGGGAATTACCAGTTTGACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  356
V  89.3% (258/289)  IGHV5-10-1*01  276  ...G....A.......A..-------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                    
D  85.7% (12/14)    IGHD3-10*01    11   -------------------------...T......G...-----------------------------------------------  24
J  97.7% (42/43)    IGHJ4*02       6    -------------------------------------------.........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_330558

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           352     3e-99
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TAGGG	AGCAGTGGCTGGTAC	GGGATAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTAGGGAGCAGTGGCTGGTACGGGATAGACTACTTTGAATAC	ARVGSSGWYGIDYFEY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  I  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3406   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCATCAGTAGTTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-74*01  47   ....................................C.T.......C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  D  D  G  S  F  R  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  H  A  
                    Query_3406   91   TGTGGGTCTCACGTATTAATGATGATGGGAGTTTCAGAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACCACGCCA  180
V  95.2% (237/249)  IGHV3-74*01  137  ....................AG..........AG..C..............................................A......  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  M  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  S  S  G  W  Y  
                    Query_3406   181  AGAACATGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTATATTATTGTGCAAGAGTAGGGAGCAGTGGCTGGTACG  270
V  95.2% (237/249)  IGHV3-74*01  227  ......C.............................................G.....C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD6-19*01  7    --------------------------------------------------------------------------...............-  21

                                      T------------------>                                  
                                      G  I  D  Y  F  E  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_3406   271  GGATAGACTACTTTGAATACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  324
J  95.8% (46/48)    IGHJ4*02     1    ------..........C...............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_84468

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGGTCTGGACGTC	ASPPYYGLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	274	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_3407   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  95.1% (274/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_3407   91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  95.1% (274/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_3407   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  95.1% (274/288)  IGHV5-51*01  186  ...............G.........................T.........................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3407   271  CATATACTACTGTGCGAGTCCTCCCTACTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  95.1% (274/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  96.2% (50/52)    IGHJ6*02     11   ------------------------..........A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_84469

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           366     2e-103
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TCCCGGGAGTCT	TATGATAGTAGTGGTTAT	GGAGCGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATCCCGGGAGTCTTATGATAGTAGTGGTTATGGAGCGGGCTAC	AKSRESYDSSGYGAGY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  S  Y  G  M  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_3408   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATAGTTATGGCATGCAGTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (241/248)  IGHV3-30*18  47   ..........................................G...C...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3408   91   AGTGGGTGGCACTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  97.2% (241/248)  IGHV3-30*18  137  ...........G..............................................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  V  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  S  R  E  S  Y  D  S  
                    Query_3408   181  AGAACACGGTGTCTCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTACTACTGTGCGAAATCCCGGGAGTCTTATGATAGTA  270
V  97.2% (241/248)  IGHV3-30*18  227  ........C...A..........................................T............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (18/18)   IGHD3-22*01  8    --------------------------------------------------------------------------------..........  17

                                      T------------------>                                  
                                      S  G  Y  G  A  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3408   271  GTGGTTATGGAGCGGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (18/18)   IGHD3-22*01  18   ........----------------------------------------------  25
J  100.0% (38/38)   IGHJ4*02     11   ----------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_292738

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-16*02                                                                                           12.2    32   
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGT	TCGTTA	CCCAATCTTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTTCGTTACCCAATCTTGGCTACTACTACGGTATGGACGTC	ARDRSLPNLGYYYGMDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  M  G  L  E 
                    Query_3409   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGATGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...............................G.........T...........................C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  Y  S  G  T  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_3409   91   TGGATTGGGCATATCTATTACAGTGGGACCACCAGTTACAATCCTTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAT  180
V  93.5% (229/245)  IGHV4-59*01  139  .........T..................G.....AC.....C..C...........................G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  S  L  P  N  L  G  Y 
                    Query_3409   181  CAGTTCTCCCTGAAGCTGAATTCCGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATCGTTCGTTACCCAATCTTGGCTAC  270
V  93.5% (229/245)  IGHV4-59*01  229  ...................GC..T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*02  28   ---------------------------------------------------------------------......---------------  33
J  96.4% (53/55)    IGHJ6*02     8    --------------------------------------------------------------------------------------....  11

                                      ----------------->                                 
                                       Y  Y  G  M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_3409   271  TACTACGGTATGGACGTCTGGGGCCAAGGGGCCACCGTCACCGTCTCCTCA  321
J  96.4% (53/55)    IGHJ6*02     12   ..............................A....G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_84466

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTCCGGCATGGCCGTC	ARLMSRLNSGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_3410   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_3410   91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  S  G  M 
                    Query_3410   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTCCGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  90.0% (45/50)    IGHJ6*02     13   -------------------------------------------------------------------------------...A...T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_3410   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  90.0% (45/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_84460

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           396     2e-112
IGHD3-3*02                                                                                            12.2    36    
IGHJ3*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGAC	CATATTTGG	GAATATCTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGACCATATTTGGGAATATCTTTGATGTTTTTGATATC	ARPTIFGNIFDVFDI	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	271	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  T  G  S  S  V  K  V  S  C  K  A  S  G  G  S  F  N  N  Y
                    Query_3411   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGACTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCTCCTTCAACAACTA  90
V  93.8% (271/289)  IGHV1-69*01  6    ..................................C.........................................A......G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  G  I  L  P  V  F  G  T  T  K  Y  A  Q
                    Query_3411   91   TGGTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAATGGGTGGGAGGGATCCTCCCTGTCTTTGGCACAACAAAGTACGCACA  180
V  93.8% (271/289)  IGHV1-69*01  96   ..C.....G.................................G...A...........A.....A.......T...G....C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  D  S  T  T  T  A  Y  L  E  L  S  S  L  R  S  E  D  T  A
                    Query_3411   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGATTCCACGACCACAGCCTACCTGGAGCTCAGTAGCCTGAGATCTGAGGACACGGC  270
V  93.8% (271/289)  IGHV1-69*01  186  ....................................A.......G..........A.......G..C.......................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  P  T  I  F  G  N  I  F  D  V  F  D  I  W  G  Q  G  T  N  V  T  V  S  S
                    Query_3411   271  CGTGTATTACTGTGCGAGACCGACCATATTTGGGAATATCTTTGATGTTTTTGATATCTGGGGCCAAGGGACAAACGTCACCGTCTCCTC  360
V  93.8% (271/289)  IGHV1-69*01  276  ...................-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  88.9% (8/9)      IGHD3-3*02   8    ------------------------...T.....---------------------------------------------------------  16
J  92.0% (46/50)    IGHJ3*02     1    ------------------------------------------.....C..........................TG...........T..  48

                                        
                                        
                    Query_3411   361  AG  362
J  92.0% (46/50)    IGHJ3*02     49   ..  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_84461

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           420     7e-120
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ3*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AGGGG	AGTGGGAGC	CCCTTCTTAGAGGCA	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAAGGGGAGTGGGAGCCCCTTCTTAGAGGCACTTTTGATATC	AKEGEWEPLLRGTFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  S  A  V  K  V  A  C  K  A  S  G  G  T  F  S  N  Y
                    Query_3412   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGTCCGCGGTGAAAGTCGCCTGCAAGGCTTCTGGAGGCACCTTCAGCAACTA  90
V  96.2% (280/291)  IGHV1-69*01  6    ..................G..........A.............T.......G...T..............................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  F  F  G  T  A  N  Y  A  Q
                    Query_3412   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTTTCTTTGGTACAGCAAACTACGCACA  180
V  96.2% (280/291)  IGHV1-69*01  96   ....................................................G...........A.........................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  L  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_3412   181  GAGGTTGCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  96.2% (280/291)  IGHV1-69*01  186  ..A...C...................................................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  K  E  G  E  W  E  P  L  L  R  G  T  F  D  I  W  G  Q  G  T  M  V  I  V  S
                    Query_3412   271  CGTGTATTACTGTGCGAAAGAAGGGGAGTGGGAGCCCCTTCTTAGAGGCACTTTTGATATCTGGGGCCAAGGGACAATGGTCATCGTCTC  360
V  96.2% (280/291)  IGHV1-69*01  276  .................G...---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (9/9)     IGHD1-26*01  6    --------------------------.........-------------------------------------------------------  14
J  97.8% (44/45)    IGHJ3*02     6    --------------------------------------------------.................................C......  45

                                           
                                        S  
                    Query_3412   361  TTCAG  365
J  97.8% (44/45)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_330555

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           316     2e-88
IGHD6-6*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3413   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.7% (225/248)  IGHV3-21*01  47   ............................T............AG...C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  T  S  R  D  N  G  
                    Query_3413   91   AGTGGGTCTCATCCATCAGTAGTAGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCACCTCCAGAGACAACGGCA  180
V  90.7% (225/248)  IGHV3-21*01  137  ................T........T...AGT......T.C..C..A......G..A...............T..............C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_3413   181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  90.7% (225/248)  IGHV3-21*01  227  ....C..................AA...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3413   271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_84463

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD6-25*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAGG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTC	ARQSSAGRTRYGMDV	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	68	3	0	95.8
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	292	275	17	0	94.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  D  
                    Query_3414   5    TGCAGCTAGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATTCGACTTTACCGACT  94
V  94.2% (275/292)  IGHV5-51*01  5    .......G.............................C.............................T.......A.AG.......AG..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  V  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  
                    Query_3414   95   ACTGGATCGTCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACGAGATACAGTC  184
V  94.2% (275/292)  IGHV5-51*01  95   .........G..............T......................................................C........C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  
                    Query_3414   185  CGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCG  274
V  94.2% (275/292)  IGHV5-51*01  185  ..............................C.............A.......................A.....................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------CDR3-IMGT----------------->                               
                                      A  M  Y  F  C  A  R  Q  S  S  A  G  R  T  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  
                    Query_3414   275  CCATGTATTTTTGTGCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGT  364
V  94.2% (275/292)  IGHV5-51*01  275  .........AC...........--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD6-25*01  7    -----------------------.......------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   --------------------------------------------............................................C.  60

                                        
                                      S 
                    Query_3414   365  CA  366
J  97.9% (47/48)    IGHJ6*02     61   ..  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_108624

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            382     4e-108
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTATTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3415   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_3415   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  98.8% (247/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  H  C  A  R  E  K  T  A  A  V  V  
                    Query_3415   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATCACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  98.8% (247/250)  IGHV3-7*01   227  ........................................................T.............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3415   271  TTGACTATTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  94.9% (56/59)    IGHJ6*02     4    ---....C..C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_108625

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           352     3e-99
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCATAGGGGTG	ATTACGATTTTTGGAGGGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCATAGGGGTGATTACGATTTTTGGAGGGGTTATTGACTACTTCGACTAC	ARSIGVITIFGGVIDYFDY	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	234	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3416   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (234/243)  IGHV4-59*08  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  S  T  K  Y  N  P  S  L  Q  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_3416   91   TGGATTGGTTATGTGTATTACAGTGGGAGCACCAAGTATAACCCCTCGCTCCAGAGTCGAGTCACCATATCACTAGACACCTCCAAGAAC  180
V  96.3% (234/243)  IGHV4-59*08  139  ........G...A.C....................C..C........C...A....................G.......G.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  I  G  V  I  T  I  F  G 
                    Query_3416   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGATCCATAGGGGTGATTACGATTTTTGGA  270
V  96.3% (234/243)  IGHV4-59*08  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.8% (23/24)    IGHD3-3*01   3    ---------------------------------------------------------------------------...............  17

                                      ----------------------->                                  
                                       G  V  I  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3416   271  GGGGTTATTGACTACTTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.8% (23/24)    IGHD3-3*01   18   .T.......-------------------------------------------------  26
J  97.9% (47/48)    IGHJ4*02     1    ----------.......T........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_108626

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD1-26*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCGA	TATACTGGGAGCTAC	CGAC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCGATATACTGGGAGCTACCGACATGCTTTTGATATC	ARFRYTGSYRHAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	233	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3417   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTATTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  95.9% (233/243)  IGHV4-59*01  49   ...........................................G...C.A.......................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       Y  I  G  Y  I  S  Y  S  G  S  T  D  Y  N  P  S  L  K  S  G  V  T  I  S  L  D  T  S  K  N 
                    Query_3417   91   TATATTGGGTATATCTCTTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTGGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  95.9% (233/243)  IGHV4-59*01  139  .GG.............A................A.......................C..............G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  R  Y  T  G  S  Y  R  H 
                    Query_3417   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATTCCGATATACTGGGAGCTACCGACAT  270
V  95.9% (233/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD1-26*01  3    ---------------------------------------------------------------------....G..........------  17
J  97.8% (44/45)    IGHJ3*02     3    ----------------------------------------------------------------------------------------..  4

                                      ----------->                               
                                       A  F  D  I  W  S  Q  G  T  M  V  T  V  S  
                    Query_3417   271  GCTTTTGATATCTGGAGCCAAGGGACAATGGTCACCGTCTCTT  313
J  97.8% (44/45)    IGHJ3*02     5    ...............G...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_108627

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           402     3e-114
IGHD2-15*01                                                                                           21.8    0.048 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGTTTTTC	GGATATTGTAG	GGATGGAAATTGTTACGCACTGGAGTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGTTTTTCGGATATTGTAGGGATGGAAATTGTTACGCACTGGAGTAT	ARDRFFGYCRDGNCYALEY	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	68	6	0	91.9
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	276	19	0	93.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  T  F  T  
                    Query_3418   2    AGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACCTCCGGTTACACCTTTACCA  91
V  93.6% (276/295)  IGHV1-18*04  2    ....T........G...................A..................................G.T..T................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  G  L  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  T  Y  N  G  N  T  N  Y  
                    Query_3418   92   GTTACGGTCTCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCGGCACTTACAATGGGAACACAAACTATG  181
V  93.6% (276/295)  IGHV1-18*04  92   .C......A...G.................................................A..G..........T.............  181
                                      S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  K  F  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  L  E  L  R  S  L  R  S  D  D  
                    Query_3418   182  CACAGAAGTTCCAGGGCAGAGTCACCATGACCACAGATACATCCACGAGAACAGCGTACTTGGAGCTGAGGAGCCTGAGATCTGACGACA  271
V  93.6% (276/295)  IGHV1-18*04  182  ........C............................C...........C.....C...A..............................  271
                                      A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  L  Y  Y  C  A  R  D  R  F  F  G  Y  C  R  D  G  N  C  Y  A  L  E  Y  W  G  Q  G  T  
                    Query_3418   272  CGGCCCTATATTACTGTGCGAGAGATAGGTTTTTCGGATATTGTAGGGATGGAAATTGTTACGCACTGGAGTATTGGGGCCAGGGAACCC  361
V  93.6% (276/295)  IGHV1-18*04  272  .....G.G.................-----------------------------------------------------------------  296
                                      T  A  V  Y  Y  C  A  R                                                                    
D  100.0% (11/11)   IGHD2-15*01  2    -----------------------------------...........--------------------------------------------  12
J  100.0% (34/34)   IGHJ4*02     15   --------------------------------------------------------------------------................  30

                                                        
                                      L  V  T  V  S  S  
                    Query_3418   362  TGGTCACCGTCTCCTCAG  379
J  100.0% (34/34)   IGHJ4*02     31   ..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_20204

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD6-25*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTC	ARQSSAGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  S  S  G  Y  D  F  L  D  Y
                    Query_3419   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGAGTTCTGGATACGACTTTCTCGACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ..............................A.....C...........................G...........AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_3419   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G.......................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3419   181  GTCATTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGAACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  ...C.........................................C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  M  V  T  V  S  S
                    Query_3419   271  CAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTC  360
V  95.2% (277/291)  IGHV5-51*01  276  ..T..................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------...............................C...............  61

                                       
                                       
                    Query_3419   361  A  361
J  97.9% (47/48)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_108628

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           329     3e-92
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_3420   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  P  L  K  P  R  V  T  I  S  L  D  T  S  K  N 
                    Query_3420   91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCCCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*08  139  ...A....G......T.......T.....................T........AG............A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G 
                    Query_3420   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGT  270
V  93.0% (227/244)  IGHV4-59*08  229  .............A......C..........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_3420   271  TATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  334
J  94.2% (49/52)    IGHJ1*01     1    ------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_108629

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           369     2e-104
IGHD1-1*01                                                                                            18.0    0.64  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCTT	TACAACTGG	GTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCTTTACAACTGGGTTTTTGACTTC	ARGLYNWVFDF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	263	27	0	90.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  D  T  F  T  S  Y
                    Query_3421   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCGGGGTCCTCGGTGAGGGTCTCCTGCAAGGCTTCTGGAGACACCTTCACTAGTTA  90
V  90.7% (263/290)  IGHV1-69*01  6    ..................G.................T.............A.......................G........GC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        S  I  S  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  G  I  I  P  R  F  G  T  K  N  Y  A  Q
                    Query_3421   91   CAGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGAGGCATCATCCCCAGGTTTGGTACAAAGAATTACGCACA  180
V  90.7% (263/290)  IGHV1-69*01  96   TGC...................................T...............G........T.TC.........GCA..C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  G  P  T  S  T  V  Y  M  D  L  S  S  L  T  S  E  D  T  A
                    Query_3421   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGGACCCACGAGCACAGTCTACATGGACCTGAGCAGCCTGACATCTGAGGACACGGC  270
V  90.7% (263/290)  IGHV1-69*01  186  ...................................A.T............C.........G.............G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                 
                                        T  Y  Y  C  A  R  G  L  Y  N  W  V  F  D  F  W  G  Q  G  S  L  V  T  V  S  S 
                    Query_3421   271  CACATATTACTGTGCGAGAGGGCTTTACAACTGGGTTTTTGACTTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCA  349
V  90.7% (263/290)  IGHV1-69*01  276  .GTG................-----------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                             
D  100.0% (9/9)     IGHD1-1*01   3    -------------------------.........---------------------------------------------  11
J  95.2% (40/42)    IGHJ4*02     6    -------------------------------------.......A.............A....................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_135769

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     1e-109
IGHD6-6*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTC	ATTREQLVPIFDF	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	267	20	0	93


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  L  T  S  Y
                    Query_3422   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGCAAGGGCTCTGGATATAGCTTAACCAGTTA  90
V  93.0% (267/287)  IGHV5-51*01  6    ............................................................T.....T........C.....T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  V  P  G  K  G  L  E  W  I  G  I  I  Y  P  A  D  S  E  T  K  Y  S  P
                    Query_3422   91   TTGGATCGCCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATTGGGATCATCTATCCTGCTGACTCTGAAACCAAATACAGCCC  180
V  93.0% (267/287)  IGHV5-51*01  96   C.......G.............A.........................G................G.........T....G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  S  S  S  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3422   181  GTCCTTCCAAGGCCAGGTCACCATCTCGGCCGACAAGTCTAGCAGCTCCGCCTTCTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.0% (267/287)  IGHV5-51*01  186  ...........................A...........C.T....A......A.C..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        I  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3422   271  CATATATTATTGTGCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTCTGGGGGCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  93.0% (267/287)  IGHV5-51*01  276  ...G.....C.......---------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------.......A......C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_292735

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           325     3e-91
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGGGGGAG	ACTATGATCAGAGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGGAGACTATGATCAGAGGTTTGACTAT	ARDGGDYDQRFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  A  W  I  R  Q  A  P  G  K  G  L  
                    Query_3423   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGGCCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-11*01  47   ........................................................AG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  T  S  G  T  D  I  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  W  D  Y  A  
                    Query_3423   91   AGTGGATTTCATACATTACTAGTGGTACTGATATCAAATACTACGCAGACTCTGTGAAGGGTCGATTTACCATCTCCTGGGACTACGCCA  180
V  91.6% (229/250)  IGHV3-11*01  137  .....G............G....A..GG.AG..C..T........................C.....C.........A.....A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  G  G  D  Y  D  Q  
                    Query_3423   181  AGAACTCTCTGTATCTGCAAATGAGCAGTCTGAGAGCCGAGGACACGGCCATATATTATTGTGCGAGAGATGGGGGAGACTATGATCAGA  270
V  91.6% (229/250)  IGHV3-11*01  227  .......A................A...C.....................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-16*01  17   ----------------------------------------------------------------------........------------  24

                                      ---------->                                  
                                      R  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_3423   271  GGTTTGACTATTGGGGCCTGGGGACCCTGGTCACCGTCTCCTCAG  315
J  93.0% (40/43)    IGHJ4*02     6    --........C.......A...A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_292736

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           347     7e-98
IGHD1-26*01                                                                                           10.3    118  
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TAGTG	CGTCCGCTCGAGTTTTA	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATAGTGCGTCCGCTCGAGTTTTAGACGTC	ARDSASARVLDV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  D  A  S  G  F  T  F  S  S  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3424   1    GGTCCCTGAGACTCTCCTGTGACGCCTCTGGATTCACCTTTAGTAGCCACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-74*01  47   .....................CA.................C......T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  S  T  D  G  S  R  T  T  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  T  
                    Query_3424   91   TGTGGGTCTCACGTATTAGTACTGATGGGAGTCGCACAACCTACGTGGACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  94.4% (236/250)  IGHV3-74*01  137  ..................A..G..........A......G.....C..........A.............................G...  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  A  S  A  R  V  
                    Query_3424   181  AGAACACACTGTATCTGCAATTGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGAGATAGTGCGTCCGCTCGAGTTT  270
V  94.4% (236/250)  IGHV3-74*01  227  .......G............A...............................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  5    ----------------------------------------------------------------------.....---------------  9

                                      ------->                                 
                                      L  D  V  W  G  Q  G  T  T  V  I  I  S  S 
                    Query_3424   271  TAGACGTCTGGGGCCAAGGGACCACGGTCATCATCTCCTCA  311
J  94.9% (37/39)    IGHJ6*02     24   --............................C.G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_292730

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           344     6e-97
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGACGTGCGCACTCAA	GGGGGA	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGACGTGCGCACTCAAGGGGGATTGACTAC	ARDLGRAHSRGIDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  N  N  H  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3425   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGCTTCAATAACCATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-33*01  47   ....................................C.....G..G.T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  S  R  R  Y  Y  S  D  S  V  R  G  Q  F  T  I  S  R  D  N  S  
                    Query_3425   91   AGTGGGTGGCAATTATTTGGTATGATGGAAGTCGTAGATACTATTCAGACTCCGTGAGGGGCCAATTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-33*01  137  ...........G....A...............AA..A.......G............A.....G..........................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  S  A  E  D  T  A  I  Y  Y  C  A  R  D  L  G  R  A  H  S  
                    Query_3425   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGCGCCGAGGACACGGCTATATATTACTGTGCGAGAGATCTTGGACGTGCGCACTCAA  270
V  94.0% (235/250)  IGHV3-33*01  227  ..................................A...............G.G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ------------->                                 
                                      R  G  I  D  Y  W  G  L  G  T  L  V  T  V  S  S 
                    Query_3425   271  GGGGGATTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCA  317
D  100.0% (6/6)     IGHD3-16*01  18   ......-----------------------------------------  23
J  97.6% (40/41)    IGHJ4*02     7    ------...............A.........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_47602

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACAGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	268	18	0	93.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_3426   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  93.7% (268/286)  IGHV5-51*01  6    ..............................A...................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  Q  G  L  E  L  M  G  L  I  Y  P  G  D  S  D  T  W  Y  S  P
                    Query_3426   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCAAGGCCTGGAGTTGATGGGGCTCATCTATCCTGGTGACTCTGATACCTGGTACAGTCC  180
V  93.7% (268/286)  IGHV5-51*01  96   ......................A........A............G.......A..........................A.A.....C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  T  P  A  Y  L  Q  W  T  T  L  K  A  S  D  T  A
                    Query_3426   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCACCCCCGCCTACCTGCAGTGGACCACCCTGAAGGCCTCGGACACCGC  270
V  93.7% (268/286)  IGHV5-51*01  186  ....................C...................A...G.A..................G..G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3426   271  CATTTACTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACAGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  353
V  93.7% (268/286)  IGHV5-51*01  276  ...G..T.........-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------.................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_228861

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AGCCTTTCACA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGAAGCCTTTCACATTGACTAC	GREAFHIDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  R  S  S  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3427   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGGAGTTCTAGCATGACCTGGGTCCGCCAGGCTCCGGGGAAGGGACTGG  90
V  92.0% (230/250)  IGHV3-21*01  47   ....................................C......T..C.A........A..................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  N  S  A  S  N  F  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_3427   91   AGTGGGTCTCATCCATTAATAGTGCTAGTAATTTCATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  92.0% (230/250)  IGHV3-21*01  137  ..................G....AG.....G..A....................................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  V  F  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  F  C  G  R  E  A  F  H  I  D  Y  
                    Query_3427   181  AGAACTCAGTCTTTCTGCAGATGAGCAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGGGAGAGAAGCCTTTCACATTGACTACT  270
V  92.0% (230/250)  IGHV3-21*01  227  ........C.G.A......A....A................................A.....C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------------.........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3427   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (42/42)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_228860

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD3-16*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	TGGGGGA	TGGCGACAATTCTGACATTTCG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTC	TRVGDGDNSDISYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  I  F
                    Query_3428   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTTAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTAGCATCTT  90
V  94.8% (274/289)  IGHV5-51*01  6    ...........................G.................................................G.....C..G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  I  K  Y  S  P
                    Query_3428   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATATCAAATACAGTCC  180
V  94.8% (274/289)  IGHV5-51*01  96   ....................................................A........................C..G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3428   181  GTCCTTCCAAGGCCAGGTCTCCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTTTGAAGGCCTCGGACACCGC  270
V  94.8% (274/289)  IGHV5-51*01  186  ...................A.................................................CC...................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  R  T  R  V  G  D  G  D  N  S  D  I  S  Y  G  M  D  V  W  G  Q  G  T  K  V  T  V
                    Query_3428   271  CATCTATTACCGTACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTCTGGGGCCAAGGGACCAAGGTCACCGT  360
V  94.8% (274/289)  IGHV5-51*01  276  ...G......T..G.....-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-16*01  17   --------------------.......---------------------------------------------------------------  23
J  95.8% (46/48)    IGHJ6*02     15   -------------------------------------------------.....T.........................C.........  55

                                             
                                        S  S 
                    Query_3428   361  CTCCTCA  367
J  95.8% (46/48)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_228863

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     4e-93
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_3429   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  S  L  K  P  R  V  T  I  S  L  D  T  S  K  N 
                    Query_3429   91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCTCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-59*08  139  ...A....G......T.......T..............................AG............A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G 
                    Query_3429   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGT  270
V  93.4% (228/244)  IGHV4-59*08  229  .............A......C..........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_3429   271  TATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  334
J  94.2% (49/52)    IGHJ1*01     1    ------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_228862

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           353     9e-100
IGHD4-17*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACGTAGGG	ACGGTGACTAC	GGGGCGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACGTAGGGACGGTGACTACGGGGCGGGCTTTGAGTAC	ARERRDGDYGAGFEY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3430   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTAAGTAGATATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-33*01  47   ........................................C.....C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  F  D  G  N  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  E  S  
                    Query_3430   91   AATGGGTGGCAGTTATCTGGTTTGATGGAAATAATAAATACTATGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACGAGTCCA  180
V  95.2% (238/250)  IGHV3-33*01  137  .G..............A....A........G.................................A..................A.T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  H  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  E  R  R  D  G  D  Y  
                    Query_3430   181  AGAACACGCTGCATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGAACGTAGGGACGGTGACTACG  270
V  95.2% (238/250)  IGHV3-33*01  227  ...........T....................A...................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD4-17*01  6    ------------------------------------------------------------------------------...........-  16

                                      ---------------->                                  
                                      G  A  G  F  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3430   271  GGGCGGGCTTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.7% (43/44)    IGHJ4*02     5    -------......C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_228865

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           339     2e-95
IGHD1-26*01                                                                                           10.3    131  
IGHJ5*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTTGT	ACA	GGAGC	ATCAGGTGAGGGG	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGGTGAGGGGTGGCTCGACCCC	TGASGEGWLDP	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	16	8	0	66.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	97	17	0	85.1
Total	N/A	N/A	283	250	33	0	88.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  M  L  S  D  Y
                    Query_3431   1    GCAGCTGGTGCAGTCTGGAGGAGGCGTGGTCCAGCCCGGGAGATCCTTGAGACTCTCCTGTGCAGCGTCTGGATTCATGTTGAGCGATTA  90
V  88.3% (250/283)  IGHV3-33*03  6    ..........G.......G.................T.....G...C..............................CC..C..TAGC..  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  I  K  K  F  Y  A  E
                    Query_3431   91   TGGAATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATCTGGTATGATGGAATTAAGAAATTCTATGCAGA  180
V  88.3% (250/283)  IGHV3-33*03  96   ...C.....................................................A.............G...T....A.........  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  T  I  F  R  E  D  T  S  N  T  L  F  L  Q  M  D  G  L  R  A  E  D  T  A
                    Query_3431   181  GTCCGTGAAGGGCCGATTCACCATCTTCAGAGAAGACACCAGCAACACCCTGTTTCTGCAGATGGACGGCCTGAGAGCCGAGGACACGGC  270
V  88.3% (250/283)  IGHV3-33*03  186  C.........................C......CA..T...AG.....G....A......A...A..A......................  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  F  C  T  G  A  S  G  E  G  W  L  D  P  W  G  Q  G  A  Q  V  T  V  S  S  
                    Query_3431   271  TCTTTATTTTTGTACAGGAGCATCAGGTGAGGGGTGGCTCGACCCCTGGGGCCAGGGAGCCCAGGTCACCGTCTCCTCAG  350
V  88.3% (250/283)  IGHV3-33*03  276  .G.G....AC...-------------------------------------------------------------------  288
                                        V  Y  Y  C                                                                    
D  100.0% (5/5)     IGHD1-26*01  10   ----------------.....-----------------------------------------------------------  14
J  93.5% (43/46)    IGHJ5*02     6    ----------------------------------...T....................A...T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_234177

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            377     8e-107
IGHD1-1*01                                                                                            10.3    113   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	TACAA	TA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTACAATAACTTTGACTAC	ARGYNNFDY	241	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	112	2	0	98.2
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	244	3	0	98.8


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_3432  1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  98.8% (244/247)  IGHV4-4*01  49   .......................C..................................................................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_3432  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  98.8% (244/247)  IGHV4-4*01  139  ..........................................................................................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->   
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  N  N  F  D  Y  W 
                    Query_3432  181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGCGCGAGAGGCTACAATAACTTTGACTACTGG  270
V  98.8% (244/247)  IGHV4-4*01  229  .......................................................G...T.......-----------------------  295
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (5/5)     IGHD1-1*01  3    ---------------------------------------------------------------------.....----------------  7
J  100.0% (45/45)   IGHJ4*02    4    ----------------------------------------------------------------------------..............  17

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_3432  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (45/45)   IGHJ4*02    18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_234174

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD4-17*01                                                                                           16.1    2.5   
IGHJ1*01                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD4-17*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGG	ACGGTGAC	GCTCTTTTGCGAGA	TGAAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGACGGTGACGCTCTTTTGCGAGATGAATACTTCCAACAC	ARRDGDALLRDEYFQH	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  A  Y  S  F  T  N  Y
                    Query_3433   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCTTGTAAAGGTTCTGCATACAGCTTTACCAACTA  90
V  94.5% (274/290)  IGHV5-51*01  6    .........................................................C.....G.......G..............G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  G  D  S  D  A  R  Y  S  P
                    Query_3433   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGCATCATCTTTCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  94.5% (274/290)  IGHV5-51*01  96   ........G..........................................G.......A................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  I  T  L  S  A  D  K  S  V  S  T  V  Y  L  Q  W  R  S  L  K  A  S  D  T  A
                    Query_3433   181  GTCCTTCCAAGGCCACATCACCCTCTCAGCCGACAAGTCCGTCAGCACCGTCTACCTGCAGTGGAGGAGCCTGAAGGCCTCCGACACCGC  270
V  94.5% (274/290)  IGHV5-51*01  186  ...............GG.....A.................A.........C...............C..............G........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        I  Y  Y  C  A  R  R  D  G  D  A  L  L  R  D  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S
                    Query_3433   271  CATATATTACTGTGCGAGACGGGACGGTGACGCTCTTTTGCGAGATGAATACTTCCAACACTGGGGCCAGGGAACCCTGGTCACCGTCTC  360
V  94.5% (274/290)  IGHV5-51*01  276  ...G................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD4-17*01  6    -----------------------........-----------------------------------------------------------  13
J  96.0% (48/50)    IGHJ1*01     3    ---------------------------------------------............G..............C.................  47

                                           
                                        S  
                    Query_3433   361  CTCAG  365
J  96.0% (48/50)    IGHJ1*01     48   .....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_228866

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-6*01                                                                                            14.1    8.3  
IGHJ3*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-6*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCC	AGTATCGAAGATCGTC	GGCTGGTTTCTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCAGTATCGAAGATCGTCGGCTGGTTTCTCTTGATATC	ARPSIEDRRLVSLDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	216	27	0	88.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  R  G  Y  Y  W  S  W  L  R  Q  S  P  G  K  G  L  Q 
                    Query_3434   1    ACCCTGTCCCTCACCTGCGCTGTTTATGGCGGATCATTCAGGGGCTACTACTGGAGTTGGCTCCGCCAGTCCCCAGGGAAGGGGCTGCAG  90
V  88.9% (216/243)  IGHV4-34*01  49   .......................C.....T..G..C.....T..T...........C...A........C.................G..  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  R  G  I  T  N  Y  I  P  S  L  K  S  R  L  T  M  S  V  D  T  S  K  N 
                    Query_3434   91   TGGATTGGAGAAATCAATCACAGAGGGATCACCAATTACATCCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACACCTCCAAGAAT  180
V  88.9% (216/243)  IGHV4-34*01  139  ........G...........T..T..A.G......C....A...................G.......A...........G........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  S  I  E  D  R  R  L  V 
                    Query_3434   181  CAATTCTCCCTGAAACTTAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGACCCAGTATCGAAGATCGTCGGCTGGTT  270
V  88.9% (216/243)  IGHV4-34*01  229  ..G...........G..G..C.......................T..G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  81.2% (13/16)    IGHD6-6*01   2    ------------------------------------------------------------------.....A.C..C.....--------  17

                                      ----------->                                  
                                       S  L  D  I  W  G  Q  G  T  M  V  V  V  S  S  
                    Query_3434   271  TCTCTTGATATCTGGGGCCAAGGGACAATGGTCGTTGTCTCTTCAG  316
J  92.9% (39/42)    IGHJ3*02     9    ----.............................ACC..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_228869

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           343     2e-96
IGHD3-22*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GAAGTACCTGAGGGGAAAT	TATGACAGTCGTGG	CCGACATACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGGAAGTACCTGAGGGGAAATTATGACAGTCGTGGCCGACATACCCCCTTTGAGTAC	GRKYLRGNYDSRGRHTPFEY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  D  Y  Y  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_3435   1    GGTCCCTGAGACTCTCCTGTGTGGCCTCTGGATTCACCTTCAGTGACTACTACATGACATGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (233/247)  IGHV3-11*01  47   .....................CA..................................GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  A  S  G  S  T  I  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_3435   91   AGTGGGTTTCATACATTAGTGCTAGTGGTAGCACCATATACTACGCAGACTCTGTGGAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  94.3% (233/247)  IGHV3-11*01  137  ....................AG.........T........................A.................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  E  L  Q  M  N  G  L  R  I  E  D  T  A  V  Y  Y  C  G  R  K  Y  L  R  G  N  Y  
                    Query_3435   181  AGAACTCACTGGAGCTGCAAATGAACGGCCTGAGAATCGAGGACACGGCCGTGTATTACTGTGGGAGGAAGTACCTGAGGGGAAATTATG  270
V  94.3% (233/247)  IGHV3-11*01  227  ...........T.T............A........GC..........................C...-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  85.7% (12/14)    IGHD3-22*01  8    --------------------------------------------------------------------------------------....  11

                                      R3-IMGT------------------------>                                  
                                      D  S  R  G  R  H  T  P  F  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3435   271  ACAGTCGTGGCCGACATACCCCCTTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  85.7% (12/14)    IGHD3-22*01  12   .T...A....--------------------------------------------------------  21
J  97.7% (43/44)    IGHJ4*02     5    ----------------------......C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_234178

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           300     9e-84
IGHD2-15*01                                                                                           10.3    127  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TCTCC	TATTG	CCATGAGCGGGACTCGGTTTTCGAGTCGGGCTCCCCTG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATCTCCTATTGCCATGAGCGGGACTCGGTTTTCGAGTCGGGCTCCCCTGGACTAC	AKSPIAMSGTRFSSRAPLDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	220	28	0	88.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3436   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTGACTATGCCCTGAGTTGGGTCCGACAGGCTCCAGGGAAGGGGCTGC  90
V  88.7% (220/248)  IGHV3-23*01  47   ...........................................CAG.......A....C........C.....................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  T  I  S  G  S  G  R  G  T  S  T  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3436   91   AGTGGGTCTCAACTATCAGTGGTAGTGGTCGTGGAACCTCCACTGTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  88.7% (220/248)  IGHV3-23*01  137  ...........G....T............G..A.C..A.A.TAC.C............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  Q  L  S  S  L  R  V  D  D  T  A  I  Y  Y  C  A  K  S  P  I  A  M  S  G  
                    Query_3436   181  AGAACACACTGTATCTCCAGCTGAGCAGCCTGAGAGTCGACGACACGGCCATATACTATTGTGCGAAATCTCCTATTGCCATGAGCGGGA  270
V  88.7% (220/248)  IGHV3-23*01  227  .......G........G..AA...A...........C...G.........G....T..C.........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD2-15*01  5    -------------------------------------------------------------------------.....------------  9

                                      R3-IMGT------------------------>                                  
                                      T  R  F  S  S  R  A  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3436   271  CTCGGTTTTCGAGTCGGGCTCCCCTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
J  100.0% (40/40)   IGHJ4*02     9    --------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_234179

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           382     3e-108
IGHD1-1*01                                                                                            10.3    117   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TA	GAACG	GCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATAGAACGGCATTTGACTAC	TRDRTAFDY	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	30	0	0	100
FR3-IMGT	135	248	114	113	1	0	99.1
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	250	6	0	97.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  G  D  Y  G  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3437   1    GGTCCCTGAGACTCTCCTGTTCAGCTTCTGGATTCACCTTTGGTGATTATGGTCTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.7% (250/256)  IGHV3-49*04  47   ....................A..............................C.A...G................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_3437   91   AATGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  97.7% (250/256)  IGHV3-49*04  137  .G........................................................................................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  T  R  D  R  T  A  F  
                    Query_3437   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAAGCGAGGACACAGCCGTGTATTACTGTACTAGAGATAGAACGGCATTTG  270
V  97.7% (250/256)  IGHV3-49*04  227  ..........................................C.................................--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (5/5)     IGHD1-1*01   11   ------------------------------------------------------------------------------.....-------  15
J  100.0% (43/43)   IGHJ4*02     6    --------------------------------------------------------------------------------------....  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3437   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (43/43)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_226565

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCGACC	GGGTACATCAGTGGC	GGCA	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCGACCGGGTACATCAGTGGCGGCATCGACCTC	AKATGYISGGIDL	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	24	16	5	3	66.7
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	247	222	22	3	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  D  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3438   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCAGTTTTGACACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  89.9% (222/247)  IGHV3-23*01  47   .....................C..............CC...AG..G.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  S  S  G     G  D  N  T  Y  Y  A  D  S  V  K  G  R  F  A  L  S  R  D  N  S  
                    Query_3438   91   AATGGGTCTCAGGTTCTAGTGGT---GGTGATAATACATACTACGCAGACTCCGTGAAGGGCCGGTTCGCCCTCTCCAGAGACAATTCCA  177
V  89.9% (222/247)  IGHV3-23*01  137  .G..........C.AT.......AGT....G..GC.................................A..A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  S  T  L  Y  L  H  M  N  G  L  R  V  E  D  T  A  I  Y  Y  C  A  K  A  T  G  Y  I  S  G  
                    Query_3438   178  AGAGCACACTGTATCTGCACATGAACGGCCTGAGAGTCGAGGACACGGCCATATATTACTGTGCGAAGGCGACCGGGTACATCAGTGGCG  267
V  89.9% (222/247)  IGHV3-23*01  227  ...A...G...........A......A.........C.............G................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  86.7% (13/15)    IGHD6-19*01  1    --------------------------------------------------------------------------.....T.G.......-  15

                                      ---------->                                  
                                      G  I  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3438   268  GCATCGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.6% (41/42)    IGHJ5*02     10   ---......C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_259135

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           304     1e-84
IGHD2-15*01                                                                                           29.5    2e-04
IGHJ4*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-15*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCAGGGAGAG	TGTATTGGTGGTAGGTGCTAC	CCTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGAGCAGGGAGAGTGTATTGGTGGTAGGTGCTACCCTGCCTACTTTGACTTC	AREQGECIGGRCYPAYFDF	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  N  T  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3439   1    GGTCCCTGAGACTCTCCTGTGTCGCGTCTGGATTCACCTTCAATACGTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  88.8% (222/250)  IGHV3-33*01  47   .....................CA...................G..GC.A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  S  G  G  G  N  K  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_3439   91   AGTGGGTGGCGCTTATTTGGTCTGGCGGAGGTAATAAATATTATTCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCA  180
V  88.8% (222/250)  IGHV3-33*01  137  ..........AG....A....A..AT...A..........C...G.......................................A.....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      N  N  S  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  E  Q  G  E  C  I  G  
                    Query_3439   181  ACAATAGCCTCTCTCTCCAAATGAACAGCCTGCGAGCCGAGGACACGGCTATTTACTACTGTGCGCGAGAGCAGGGAGAGTGTATTGGTG  270
V  88.8% (222/250)  IGHV3-33*01  227  .G..C.CG..G.A...G...............A.................G.G..T.........A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD2-15*01  8    --------------------------------------------------------------------------------....G.....  17

                                      -IMGT----------------------->                                  
                                      G  R  C  Y  P  A  Y  F  D  F  W  G  H  G  T  L  V  S  V  S  S  
                    Query_3439   271  GTAGGTGCTACCCTGCCTACTTTGACTTCTGGGGCCACGGAACCCTGGTCTCCGTCTCCTCAG  333
D  90.5% (19/21)    IGHD2-15*01  18   ....C......----------------------------------------------------  28
J  93.6% (44/47)    IGHJ4*01     2    ----------------...........A.........A............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_200221

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            333     1e-93
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	CCC	TTGGAGTGGTTCTTATA	GCGGTATAATAACCAGGGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGCCCTTGGAGTGGTTCTTATAGCGGTATAATAACCAGGGGTGCTTTTCATATT	VSPWSGSYSGIITRGAFHI	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	24	3	0	88.9
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                     <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                        S  L  R  L  S  C  G  V  S  G  G  S  I  S  N  S  Y  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_3440  1    GGTCCCTGAGACTCTCCTGTGGTGTCTCTGGTGGCTCCATCAGCAATAGTTATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  93.1% (230/247)  IGHV4-4*02  47   ..A.....TCC...A....C.C.......................G....A.C.....................................  136
                                        T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                     ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                     P  E  W  I  G  E  V  Y  H  S  G  S  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  
                    Query_3440  91   CGGAGTGGATTGGGGAAGTCTATCATAGTGGGAGCACCAATTACAACCGGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCA  180
V  93.1% (230/247)  IGHV4-4*02  137  T................A......................C.......C.........................................  226
                                     L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                     -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                     K  N  H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  V  S  P  W  S  G  S  Y  S  
                    Query_3440  181  AGAACCACTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGTGAGCCCTTGGAGTGGTTCTTATAGCG  270
V  93.1% (230/247)  IGHV4-4*02  227  .......G................G......................................C...-----------------------  293
                                     K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  94.1% (16/17)    IGHD3-3*01  13   ----------------------------------------------------------------------...........A.....---  29

                                     -IMGT----------------------->                                  
                                     G  I  I  T  R  G  A  F  H  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3440  271  GTATAATAACCAGGGGTGCTTTTCATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  333
J  95.7% (45/47)    IGHJ3*02    4    ----------------.......G....C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_46526

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              58.4    1e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	221	24	6	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_3441   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.0% (221/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_3441   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.0% (221/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_3441   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCCGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.0% (221/251)  IGHV4-34*01  223  ....................GC............C...............T........C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  I  S  V  S  S 
                    Query_3441   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACTGCGATCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  87.5% (42/48)    IGHJ6*02     15   ------------------.....T.......T...............CA..G..A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_200220

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           290     2e-80
IGHD2-21*01                                                                                           12.2    31   
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGATCGGCTCC	GGTGAT	GGGATTCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGATCGGCTCCGGTGATGGGATTCGTTTTGACTCC	AKGIGSGDGIRFDS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	217	32	0	87.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  V  M  A  W  V  R  H  V  P  G  K  G  L  
                    Query_3442   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCAGGATTCACCTTCAGCAGCTATGTCATGGCCTGGGTCCGACACGTTCCAGGGAAGGGGCTGG  90
V  87.1% (217/249)  IGHV3-23*01  47   ......................A.....T...........T..........C....AG.........C..G.C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  R  G  G  A  A  P  S  T  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_3442   91   AGTGGGTCTCAAGCATTAGTGGACGTGGTGGTGCTGCACCCTCCACAGACTCCGTGAAGGGCCGCTTCAGCATCTCCAGAGACAATTCCG  180
V  87.1% (217/249)  IGHV3-23*01  137  ...........GCT........TA........AGCA..TA..A.G...................G....C...................A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      E  N  T  L  H  L  Q  M  N  S  L  R  V  E  D  T  A  T  Y  Y  C  A  K  G  I  G  S  G  D  G  
                    Query_3442   181  AAAACACCCTGCATCTACAAATGAACAGCCTGAGAGTCGAGGACACGGCCACATATTACTGTGCGAAAGGGATCGGCTCCGGTGATGGGA  270
V  87.1% (217/249)  IGHV3-23*01  227  .G.....G...T....G...................C.............GT.................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-21*01  14   --------------------------------------------------------------------------------......----  19

                                      ------------->                             
                                      I  R  F  D  S  W  G  Q  G  A  L  V  I  V  S
                    Query_3442   271  TTCGTTTTGACTCCTGGGGCCAGGGAGCCCTGGTCATCGTCTC  313
J  92.1% (35/38)    IGHJ4*02     6    -----.......A.............A.........C......  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_236992

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           403     9e-115
IGHD5-18*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGCCATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGCCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	261	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	23	1	0	95.8
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	21	0	0	100
FR3-IMGT	147	260	114	114	0	0	100
CDR3-IMGT (germline)	261	266	6	6	0	0	100
Total	N/A	N/A	266	262	4	0	98.5


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  Y  Y  W  S  W  I  R  
                    Query_3443   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGTTACTACTGGAGCTGGATCCGGC  90
V  98.5% (262/266)  IGHV4-59*01  26   ................T...............................................T.........................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  R  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_3443   91   AGCCCCCAGGGAAAAGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  98.5% (262/266)  IGHV4-59*01  116  .............GG...........................................................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  
                    Query_3443   181  TATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACA  270
V  98.5% (262/266)  IGHV4-59*01  206  ......................................................................................----  291
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     
D  93.3% (14/15)    IGHD5-18*01  6    --------------------------------------------------------------------------------------....  9

                                      ----CDR3-IMGT------------>                                  
                                      S  H  G  Y  G  G  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3443   271  GCCATGGTTACGGAGGAGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  93.3% (14/15)    IGHD5-18*01  10   ..T........-------------------------------------------------  20
J  100.0% (42/42)   IGHJ4*02     7    ------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_236993

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         382     4e-108
IGHD5-12*01                                                                                           18.0    0.62  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGAGGAT	TGGCTACGA	GACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGACCCCCTTTGACCTC	ARAGRIGYETPFDL	264	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	77	27	26	1	0	96.3
FR2-IMGT	78	128	51	51	0	0	100
CDR2-IMGT	129	149	21	19	2	0	90.5
FR3-IMGT	150	263	114	105	9	0	92.1
CDR3-IMGT (germline)	264	270	7	7	0	0	100
Total	N/A	N/A	270	257	13	0	95.2


Alignments

                                        <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                           G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  H  Y  W  G  W  I  
                    Query_3444     1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTTACTCCATCAGCAGTGGTCACTACTGGGGCTGGATCC  90
V  95.2% (257/270)  IGHV4-38-2*02  26   ................T......................................................T..................  115
                                           G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  

                                        --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                        R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  
                    Query_3444     91   GGCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCA  180
V  95.2% (257/270)  IGHV4-38-2*02  116  .............................................A.........C.........A..............A.........  205
                                        R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  

                                        ----------------------FR3-IMGT----------------------------------------------------><------
                                        T  I  S  V  D  M  S  K  N  Q  F  S  L  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  
                    Query_3444     181  CCATATCAGTAGACATGTCCAAGAACCAGTTCTCGTTGAATCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGAG  270
V  95.2% (257/270)  IGHV4-38-2*02  206  ...............C..................CC....G....G...........C...............G................  295
                                        T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  

                                        ----------CDR3-IMGT--------------->                                  
                                        A  G  R  I  G  Y  E  T  P  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3444     271  CGGGGAGGATTGGCTACGAGACCCCCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  100.0% (9/9)     IGHD5-12*01    11   ----------.........--------------------------------------------------  19
J  95.5% (42/44)    IGHJ4*02       5    -------------------------.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_236990

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         349     2e-98
IGHD5-18*01                                                                                           25.7    0.003
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD5-18*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGGA	GGATACAGTTATGGTT	TGA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGGAGGATACAGTTATGGTTTGAACTGGCACTTCGATCTC	ARVGGYSYGLNWHFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  A  F  N  T  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3445     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAATACGTACGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-30-3*01  47   ...................................A......G..GC..T........................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  D  G  S  A  K  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_3445     91   AGTGGGTGGCGGTTATCTCATATGATGGAAGCGCCAAATACTACGCAGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAGACAATTCCA  180
V  94.8% (236/249)  IGHV3-30-3*01  137  ..........A.....A...............AAT..................................C....................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                        K  N  T  L  H  L  Q  T  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  G  Y  S  Y  G  
                    Query_3445     181  AGAACACGCTGCATCTGCAAACGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGTTGGAGGATACAGTTATGGTT  270
V  94.8% (236/249)  IGHV3-30-3*01  227  ...........T.........T...............................................---------------------  295
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.8% (15/16)    IGHD5-18*01    3    --------------------------------------------------------------------------........C.......  18

                                        T------------------>                                  
                                        L  N  W  H  F  D  L  W  G  R  C  T  L  V  T  V  S  S  
                    Query_3445     271  TGAACTGGCACTTCGATCTCTGGGGCCGTTGCACCCTGGTCACTGTCTCCTCAG  324
J  96.1% (49/51)    IGHJ2*01       3    ---.....T....................G........................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_236991

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           329     3e-92
IGHD2-8*01                                                                                            12.2    31   
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TAATGG	CCCGACCGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGGCCCGACCGAACTACGGCATGGACGTC	ARLMARPNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  L  T  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_3446   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCCTCACCAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCCGGGAAGGGACTGGAA  90
V  93.0% (227/244)  IGHV4-59*08  49   ..................A............G....A...GT..................A.............A..............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  R  P  N  N  N  P  S  L  R  S  R  V  T  I  S  V  D  A  S  K  N 
                    Query_3446   91   TGGATTGAGTATATCTATTACAGAGGGCGTCCCAACAACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACGCGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*08  139  .......G...............T...A.CA.....T...............A.........................A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  A  R  P  N  Y  G  M 
                    Query_3446   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACTAATGGCCCGACCGAACTACGGCATG  270
V  93.0% (227/244)  IGHV4-59*08  229  ...................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-8*01   13   ----------------------------------------------------------------......--------------------  18
J  94.0% (47/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_3446   271  GACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCGTCA  309
J  94.0% (47/50)    IGHJ6*02     24   .............A.....................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_236996

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     1e-99
IGHD3-22*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGTC	ATTATTATGATA	AAAGCGATTATTGGAAGC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTCATTATTATGATAAAAGCGATTATTGGAAGCACTTTGACTAC	ARGGHYYDKSDYWKHFDY	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  F  Y  H  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3447   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGCGGTTTTTACCACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.2% (238/250)  IGHV4-31*03  49   ....................................A.......T...GG....T.......C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_3447   91   CTGGAGTGGATTGGGTACATCTATAACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACGATATCAGTAGACACGTCT  180
V  95.2% (238/250)  IGHV4-31*03  139  ........................T.........G...............................G....C..................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  N  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  H  Y  Y  D  K 
                    Query_3447   181  AAGAACCAGCTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGGGGGTCATTATTATGATAAA  270
V  95.2% (238/250)  IGHV4-31*03  229  .........T...........................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD3-22*01  3    ----------------------------------------------------------------------------....C.......--  14

                                      -IMGT--------------------->                                  
                                       S  D  Y  W  K  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3447   271  AGCGATTATTGGAAGCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  100.0% (45/45)   IGHJ4*02     4    ----------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_236997

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           372     2e-105
IGHD6-19*01                                                                                           12.2    34    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	GCTCCAG	GGCTGG	GATT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCCAGGGCTGGGATTCTTTGACTAT	AAPGLGFFDY	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	262	24	0	91.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  A  S  G  N  T  L  T  N  N
                    Query_3448   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCGTCAGTGAAAGTTGCCTGCAAGGCATCCGGAAACACCCTCACCAACAA  90
V  91.6% (262/286)  IGHV1-46*01  6    ..........................................C........G...T.............T...T.....T......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  N  K  T  A  Y  A  Q
                    Query_3448   91   CTTCATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTAATAAGACAGCCTATGCACA  180
V  91.6% (262/286)  IGHV1-46*01  96   ..AT..................................................................GG..GC...AG...C.....  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  L  T  M  T  R  V  T  S  T  R  T  V  Y  M  E  L  S  N  L  R  S  E  D  T  A
                    Query_3448   181  GAAGTTCCAGGGCAGACTGACCATGACTAGGGTCACGTCCACGAGAACAGTCTACATGGAGCTGAGCAACCTGAGATCTGAGGACACGGC  270
V  91.6% (262/286)  IGHV1-46*01  186  ................G.C........C....A............C......................G.....................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        V  Y  Y  C  A  A  P  G  L  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_3448   271  CGTGTATTACTGCGCGGCTCCAGGGCTGGGATTCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  347
V  91.6% (262/286)  IGHV1-46*01  276  ............T...-------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                              
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------......------------------------------------------------  18
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------.........C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_236994

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           277     9e-77
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCAA	AGGCTAG	ATTACTATAGTAGTAGTGG	GAACTATGTG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCAAAGGCTAGATTACTATAGTAGTAGTGGGAACTATGTG	VQRLDYYSSSGNYV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	19	5	0	79.2
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	125	24	14	10	0	58.3
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	245	6	4	2	0	66.7
Total	N/A	N/A	231	204	27	0	88.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  K  I  A  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I 
                    Query_3449   15   TGTGCAGCCTCTGGATTCACCTTCAGCAAAATTGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAACAATC  104
V  88.3% (204/231)  IGHV3-23*01  64   .......................T....GCTA........G...........................................G.T..T  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  D  M  T  I  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  M  L  Y  L 
                    Query_3449   105  AGTGATATGACTATTTCCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACATGCTCTACCTG  194
V  88.3% (204/231)  IGHV3-23*01  154  ....G..GTGG.GG.AG..............................G...............................C...G..T...  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><----------------CDR3-IMGT--------------->   
                                       Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  V  Q  R  L  D  Y  Y  S  S  S  G  N  Y  V  W 
                    Query_3449   195  CAGATGAACAGCCTTAGAGCCGAGGACACGGCCATATATTACTGTGTGCAAAGGCTAGATTACTATAGTAGTAGTGGGAACTATGTGTGG  284
V  88.3% (204/231)  IGHV3-23*01  244  ..A...........G..................G............C.A..---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  89.5% (17/19)    IGHD3-22*01  3    ----------------------------------------------------------........GA.........-------------  21
J  97.1% (33/34)    IGHJ4*02     15   ---------------------------------------------------------------------------------------...  17

                                                                     
                                       G  Q  G  T  L  V  T  V  A  S  
                    Query_3449   285  GGCCAGGGAACCCTGGTCACCGTCGCCTCAG  315
J  97.1% (33/34)    IGHJ4*02     18   ........................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_236995

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           358     3e-101
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	N/A	N/A	CCCCGCATCGCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCCGCATCGCGTTTTGACTAC	ARGPASRFDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  F  G  G  S  F  R  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3450   1    ACCCTGTCCCTCACCTGCGCTGTCTTTGGTGGGTCCTTCAGGGGGTCCTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  96.7% (237/245)  IGHV4-34*01  49   .........................A...............T..T.A...........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_3450   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAATTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-34*01  139  ...................................C....................................G.................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  P  A  S  R  F  D  Y  W 
                    Query_3450   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGTCCGCCGCGGACACGGCTGTATATTACTGTGCGAGAGGCCCCGCATCGCGTTTTGACTACTGG  270
V  96.7% (237/245)  IGHV4-34*01  229  ...........................A...................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
J  100.0% (43/43)   IGHJ4*02     6    ------------------------------------------------------------------------------............  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_3450   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (43/43)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_200222

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*05                                                                                           396     2e-112
IGHD6-19*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*05	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCCCCCGCTAT	CAGTGGCT	TCTACAAAGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCCCCGCTATCAGTGGCTTCTACAAAGTTCTACTTTGACTCC	ASPPLSVASTKFYFDS	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	270	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  M  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y 
                    Query_3451   2    CAGCTGGTGCAGTCTGGAGCTGAGATGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGGCACCTTCAGCAGTTAT  91
V  94.1% (270/287)  IGHV1-69*05  7    .................G......G........................................T....................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  G  I  I  P  F  F  G  A  A  H  Y  A  Q 
                    Query_3451   92   GCTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGTTGGGAGGGATCATCCCTTTCTTTGGTGCAGCACACTACGCACAG  181
V  94.1% (270/287)  IGHV1-69*05  97   ...A.........................................A.................A........A.....A...........  186
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  K  V  T  I  S  T  D  A  S  T  S  T  A  Y  M  Q  L  S  T  L  T  S  E  D  T  A 
                    Query_3451   182  AAGTTCCAGGGCAAAGTCACAATTAGCACGGACGCATCCACGAGCACAGCCTACATGCAGCTGAGCACCTTGACATCTGAGGACACGGCC  271
V  94.1% (270/287)  IGHV1-69*05  187  .............G......G....C........A......................G.........G.C...G................  276
                                       K  F  Q  G  R  V  T  I  T  T  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  S  P  P  L  S  V  A  S  T  K  F  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S 
                    Query_3451   272  GTGTATTACTGTGCGAGTCCCCCGCTATCAGTGGCTTCTACAAAGTTCTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCC  361
V  94.1% (270/287)  IGHV1-69*05  277  .................-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  100.0% (8/8)     IGHD6-19*01  9    ----------------------------........------------------------------------------------------  16
J  97.9% (46/47)    IGHJ4*02     2    -----------------------------------------------...........A...............................  44

                                          
                                       S  
                    Query_3451   362  TCAG  365
J  97.9% (46/47)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_41968

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           349     2e-98
IGHD1-20*01                                                                                           10.3    120  
IGHJ6*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TAGC	GGTAT	TGGCCGGTCGTTGGTCCGC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTAGCGGTATTGGCCGGTCGTTGGTCCGCTATGGACGTC	ARVAVLAGRWSAMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  W  I  H  W  V  R  Q  G  P  G  K  G  L  
                    Query_3452   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTTAGTAGTTACTGGATACACTGGGTCCGCCAAGGTCCAGGAAAGGGGCTGA  90
V  94.8% (236/249)  IGHV3-74*01  47   ......................................T.C.....C........G................C......G.........G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      M  W  V  S  R  I  N  S  D  G  S  G  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3452   91   TGTGGGTCTCACGTATTAATAGTGATGGGAGTGGCACAAGTTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (236/249)  IGHV3-74*01  137  ................................A.......C.................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  D  Q  D  T  A  V  Y  Y  C  A  R  V  A  V  L  A  G  R  
                    Query_3452   181  AGAACACGGTGTATCTGCAAATGAACAGTCTGAGAGACCAGGACACGGCTGTCTATTACTGTGCAAGAGTAGCGGTATTGGCCGGTCGTT  270
V  94.8% (236/249)  IGHV3-74*01  227  ........C...........................C.G.............G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-20*01  1    -------------------------------------------------------------------------.....------------  5

                                      ---------------->                              
                                      W  S  A  M  D  V  W  G  Q  G  P  T  V  T  V  S 
                    Query_3452   271  GGTCCGCTATGGACGTCTGGGGCCAAGGGCCCACGGTCACCGTCTCC  317
J  97.5% (39/40)    IGHJ6*02     20   -------......................A.................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_41969

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         399     3e-113
IGHD5-12*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCACAG	TAGTGGCCACG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCACAGTAGTGGCCACGACTACTTTGACTAC	ARLHSSGHDYFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  R  I  S  C  E  G  S  G  Y  T  F  A  T  Y
                    Query_3453     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGCAGTCTCTGAGGATCTCCTGTGAGGGTTCTGGATACACCTTCGCCACCTA  90
V  94.1% (272/289)  IGHV5-10-1*01  6    ........................................G....................A...............G...TA...G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  K  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_3453     91   TTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAAGATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  94.1% (272/289)  IGHV5-10-1*01  96   C..................................................G.G....................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  T  D  N  S  I  T  T  A  Y  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_3453     181  GTCCTTCCAAGGCCACGTCACCATCTCAACTGACAATTCCATCACCACTGCCTACCTGCAGTGGAACAGTCTGAAGGCCTCGGACACAGC  270
V  94.1% (272/289)  IGHV5-10-1*01  186  ............................G.......G.......G....................G...C.................C..  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          M  Y  Y  C  A  R  L  H  S  S  G  H  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3453     271  CATGTATTATTGCGCGAGACTTCACAGTAGTGGCCACGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  94.1% (272/289)  IGHV5-10-1*01  276  .........C..T......-------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                    
D  90.9% (10/11)    IGHD5-12*01    8    ---------------------------.......T...------------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02       1    --------------------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_42435

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           411     5e-117
IGHD7-27*01                                                                                           18.0    0.65  
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCCGCCGCGGCA	AACTGGGGA	T	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCGCCGCGGCAAACTGGGGATTGATGCTTTTCATATC	ARPRRGKLGIDAFHI	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	276	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_3454   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTCAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGTTA  90
V  95.5% (276/289)  IGHV5-51*03  6    ...........................G...........................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  G  W  V  R  Q  T  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_3454   91   CTTCATCGGCTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  95.5% (276/289)  IGHV5-51*03  96   ..GG...................T.........................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  P  D  S  G
                    Query_3454   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCCCGGACAGCGG  270
V  95.5% (276/289)  IGHV5-51*03  186  ............................................G..................................T......C..C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  F  C  A  R  P  R  R  G  K  L  G  I  D  A  F  H  I  W  G  Q  G  T  M  V  T  V  S  S
                    Query_3454   271  CATATATTTTTGTGCGAGACCCCGCCGCGGCAAACTGGGGATTGATGCTTTTCATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  360
V  95.5% (276/289)  IGHV5-51*03  276  ...G....AC.........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (9/9)     IGHD7-27*01  3    --------------------------------.........-------------------------------------------------  11
J  98.0% (49/50)    IGHJ3*02     1    ------------------------------------------..........G.....................................  48

                                        
                                        
                    Query_3454   361  AG  362
J  98.0% (49/50)    IGHJ3*02     49   ..  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_42434

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           299     2e-83
IGHD3-10*01                                                                                           10.3    117  
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGA	CTTCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGACTTCAGGCCTTTGACTCC	ARGGLQAFDS	246	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	220	29	0	88.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  S  G  G  F  Y  W  T  W  I  R  Q  H  P  G  K  G  
                    Query_3455   4    CCCTGAGACTCTCCTGCACTGTGTCTGGTGGCTCCATCAACAGTGGTGGATTCTACTGGACTTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  88.4% (220/249)  IGHV4-31*03  50   .....TCC...A..........C................G.........T.A........GC............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      P  E  W  I  G  Y  I  F  Y  T  G  H  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  L  D  T  S  
                    Query_3455   94   CAGAGTGGATTGGTTACATCTTTTACACTGGACACACCTACTACAATCCGTCCCTCAGGAGTCGACTTACCATTTCACTGGACACATCTG  183
V  88.4% (220/249)  IGHV4-31*03  140  TG...........G.......A.....G...GAG............C..........A.......G.......A...G.A.....G...A  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      E  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  L  Q  A  F  D  
                    Query_3455   184  AGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGGGGACTTCAGGCCTTTGACT  273
V  88.4% (220/249)  IGHV4-31*03  230  ...................G.....C..........................G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  16   ---------------------------------------------------------------------.....----------------  20
J  88.6% (39/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------........  12

                                      ->                                  
                                      S  G  G  Q  G  S  L  V  P  V  S  S  
                    Query_3455   274  CCGGGGGCCAGGGATCCCTTGTCCCCGTCTCCTCAG  309
J  88.6% (39/44)    IGHJ4*02     13   A.T...........A....G...A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_42437

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           344     7e-97
IGHD3-3*01                                                                                            14.1    9.6  
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGACCCTAGTGTCATCCATTGCC	TACTATTTTT	C	CGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACCCTAGTGTCATCCATTGCCTACTATTTTTCCGGAATGGACGTC	AKTLVSSIAYYFSGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	14	10	0	58.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	286	253	33	0	88.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  N  H  V  L  P  T  Y 
                    Query_3456   2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCTTCAGTGAGGGTCTCCTGCAAGGCTTCTAATCACGTCCTTCCCACTTAT  91
V  88.5% (253/286)  IGHV1-18*01  7    ...................C.....................C.......A...................GG.T..AC.T..A...GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  A  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  N  N  G  N  T  N  Y  A  Q 
                    Query_3456   92   GGAATCGCCTGGGTGCGGCAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTAATAATGGTAATACAAACTATGCACAG  181
V  88.5% (253/286)  IGHV1-18*01  97   ..T...AG.........A..........................................G..T.C........C...............  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  S  M  T  T  D  T  S  T  T  T  V  Y  M  E  L  R  R  L  R  S  D  D  T  A 
                    Query_3456   182  AAGTTCCAGGGTAGAGTCAGCATGACCACAGATACATCCACGACCACGGTCTACATGGAATTGAGGAGACTCAGATCTGACGACACGGCC  271
V  88.5% (253/286)  IGHV1-18*01  187  ...C.......C.......C............C..........G...A.C.........GC.......C..G..................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------CDR3-IMGT-------------------->                           
                                       I  Y  Y  C  A  K  T  L  V  S  S  I  A  Y  Y  F  S  G  M  D  V  W  G  Q  G  T  T  V  I  V 
                    Query_3456   272  ATTTATTACTGTGCGAAGACCCTAGTGTCATCCATTGCCTACTATTTTTCCGGAATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTC  361
V  88.5% (253/286)  IGHV1-18*01  277  G.G.............--------------------------------------------------------------------------  292
                                       V  Y  Y  C  A                                                                            
D  90.0% (9/10)     IGHD3-3*01   5    ---------------------------------------...G......-----------------------------------------  14
J  93.5% (43/46)    IGHJ6*02     17   --------------------------------------------------...T...............................C....  56

                                            
                                       S  S 
                    Query_3456   362  TCTTCA  367
J  93.5% (43/46)    IGHJ6*02     57   ..C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_239460

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     2e-91
IGHD3-16*01                                                                                           10.3    115  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GCAGAG	ATGAT	N/A	TACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCAGAGATGATTACCTTGACTCC	ASRDDYLDS	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  S  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3457   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTCTGCCATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.3% (227/246)  IGHV3-23*01  47   ................................................A........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  N  G  R  G  S  R  T  D  Y  A  Y  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3457   91   AGTGGGTCTCCAGTGTTAATGGTAGGGGTTCTAGGACGGACTACGCATACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.3% (227/246)  IGHV3-23*01  137  ..........AGC.A...G......T...GG...C..AT........G..........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  T  L  Y  L  E  M  S  S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  R  D  D  Y  L  D  S  
                    Query_3457   181  AGAACACGCTGTATCTGGAAATGAGCAGCCTGAGAGTCGAGGACACGGCCGTATATTATTGTGCGAGCAGAGATGATTACCTTGACTCCT  270
V  92.3% (227/246)  IGHV3-23*01  227  .................C......A...........C.....................C.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD3-16*01  6    ------------------------------------------------------------------------.....-------------  10
J  93.5% (43/46)    IGHJ4*02     3    -----------------------------------------------------------------------------...T......A..  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3457   271  GGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  303
J  93.5% (43/46)    IGHJ4*02     16   ............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_42431

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD3-16*01                                                                                           10.3    115   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGAAAGA	GGGGG	CTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC	ARDQKEGAPDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	241	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3458   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (241/245)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3458   91   TGGATTGGGTATATCTTTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (241/245)  IGHV4-59*01  139  ................A.........................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  K  E  G  A  P  D  Y 
                    Query_3458   181  CAATTCTCCCTGAAACTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC  270
V  98.4% (241/245)  IGHV4-59*01  229  ..G...........G..................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   --------------------------------------------------------------------------.....-----------  22
J  100.0% (41/41)   IGHJ4*02     8    -----------------------------------------------------------------------------------.......  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3458   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (41/41)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_42430

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            322     2e-90
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ6*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAGG	ATTACTATGATAGAAGT	CGTCACGGCGAATT	CGGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCAGGATTACTATGATAGAAGTCGTCACGGCGAATTCGGTCTGGACGTC	ARDQDYYDRSRHGEFGLDV	247	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	132	27	17	4	6	63
FR3-IMGT	133	246	114	110	4	0	96.5
CDR3-IMGT (germline)	247	254	8	8	0	0	100
Total	N/A	N/A	254	232	16	6	91.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  D  S  F  S  S  D  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_3459   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCATTCAGCAGCGATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  91.3% (232/254)  IGHV4-4*02   49   ..................G............G...CA.......TAG.......................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><--------CDR2-IMGT--------><-----------------------------------------------
                                       E  W  I  G  E  V  F  D  S  D  S  G  S  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K 
                    Query_3459   91   GAGTGGATTGGGGAAGTCTTTGATAGTGATAGTGGGAGCGCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAG  180
V  91.3% (232/254)  IGHV4-4*02   139  ...............A...A.C....------.......A..................................................  222
                                       E  W  I  G  E  I  Y  H  S        G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K 

                                      -----FR3-IMGT----------------------------------------------------><-----------------------
                                       S  N  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  D  Y  Y  D 
                    Query_3459   181  TCCAACAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGAGAGACCAGGATTACTATGAT  270
V  91.3% (232/254)  IGHV4-4*02   223  .....G................A.....G...........................G.................----------------  296
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                   
D  94.1% (16/17)    IGHD3-22*01  3    -------------------------------------------------------------------------------...........  13

                                      CDR3-IMGT----------------------->                                 
                                       R  S  R  H  G  E  F  G  L  D  V  W  G  P  G  T  T  V  A  V  S  S 
                    Query_3459   271  AGAAGTCGTCACGGCGAATTCGGTCTGGACGTCTGGGGCCCAGGGACCACGGTTGCCGTCTCCTCA  336
D  94.1% (16/17)    IGHD3-22*01  14   ..T...------------------------------------------------------------  19
J  91.3% (42/46)    IGHJ6*02     17   --------------------....A...............A............CA...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_42433

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*03                                                                                           332     3e-93
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*03	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AATGCCA	TTCGGGG	G	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGAAATGCCATTCGGGGGTGCCTTTGATATA	VKEMPFGGAFDI	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  I  F  S  S  Y  S  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3460   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCATCTTCAGTAGCTATTCTATACATTGGGTCCGCCAGGCTCCAGGGAAGGGACTGA  90
V  92.4% (231/250)  IGHV3-64*03  47   ....................................C.............G....G..C..............................G  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      K  H  V  S  V  I  S  S  D  G  D  S  T  Y  Y  A  D  S  V  Q  G  R  F  T  L  S  R  D  N  S  
                    Query_3460   91   AACATGTATCAGTTATTAGTAGTGATGGGGATAGCACATATTACGCAGACTCAGTGCAGGGCAGATTCACCTTGTCCAGAGACAATTCCA  180
V  92.4% (231/250)  IGHV3-64*03  137  ..T....T....C..........A......G.........C...............A..............A.C................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  K  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  E  M  P  F  G  G  A  
                    Query_3460   181  AGAACAAGTTGTATCTCCAAATGAGCAGTCTGAGACCTGAGGACACGGCTGTTTATTACTGTGTGAAAGAAATGCCATTCGGGGGTGCCT  270
V  92.4% (231/250)  IGHV3-64*03  227  ......C.C.....G....................G................G.................--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (7/7)     IGHD3-10*01  13   -----------------------------------------------------------------------------.......------  19
J  93.6% (44/47)    IGHJ3*02     4    -------------------------------------------------------------------------------------...T.  8

                                      ------->                                  
                                      F  D  I  W  G  Q  G  T  T  V  T  V  S  S  
                    Query_3460   271  TTGATATATGGGGCCAAGGGACAACGGTCACCGTCTCTTCAG  312
J  93.6% (44/47)    IGHJ3*02     9    .......C................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_42432

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           408     4e-116
IGHD6-19*01                                                                                           16.1    2.6   
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	CTTTGTGGGGAAACAGA	AGTGGCTG	CCA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGACTTTGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCC	GRLCGETEVAANNWFDP	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	295	6	5	1	0	83.3
Total	N/A	N/A	293	277	16	0	94.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  M  G  S  G  Y  T  F  A  
                    Query_3461   3    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTATGGGATCTGGATACACCTTTGCCG  92
V  94.5% (277/293)  IGHV5-51*03  2    ..G...............................................................A...T..........G....A..A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      G  Y  W  I  A  W  V  C  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  D  T  R  Y  
                    Query_3461   93   GCTACTGGATCGCCTGGGTGTGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACTCTGATACCAGATACA  182
V  94.5% (277/293)  IGHV5-51*03  92   ............G.......C......................................A..............................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  G  R  A  A  D  
                    Query_3461   183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCGGGAGGGCCGCGGACG  272
V  94.5% (277/293)  IGHV5-51*03  182  ...........................................C..............................CT..A....T.....A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      A  A  M  Y  Y  C  G  R  L  C  G  E  T  E  V  A  A  N  N  W  F  D  P  W  G  Q  G  T  L  V  
                    Query_3461   273  CCGCCATGTATTACTGTGGGAGACTTTGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCG  362
V  94.5% (277/293)  IGHV5-51*03  272  ..................C....-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD6-19*01  10   ----------------------------------------........------------------------------------------  17
J  98.0% (49/50)    IGHJ5*02     1    ---------------------------------------------------......................................A  39

                                                 
                                      A  V  S  S 
                    Query_3461   363  CCGTCTCCTCA  373
J  98.0% (49/50)    IGHJ5*02     40   ...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_231676

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_3462   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  95.8% (277/289)  IGHV5-51*03  6    ...............................A..............................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  G  P
                    Query_3462   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACGGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   ...................................................G............................G....A....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_3462   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAATACCGCCTACCTGCAGTGGAGTAGCCTGCAGGCCTCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  ............................................GC....................C......A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  H  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3462   271  CATGCATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGTCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.8% (277/289)  IGHV5-51*03  276  ....T..............----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    ------------------------------------------............C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_231677

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           279     3e-77
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	216	28	6	86.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_3463   4    CCCTGAGACTCTCCTGTGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.4% (216/250)  IGHV4-34*01  50   .....TCC...A....C.....C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_3463   94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.4% (216/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_3463   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.4% (216/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_3463   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_239469

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           367     6e-104
IGHD3-16*01                                                                                           14.1    9.5   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CACTCAATCGAGGACTCCG	TGCTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACTCAATCGAGGACTCCGTGCTTATTACTTTGATCAT	ATLNRGLRAYYFDH	290	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	70	4	0	94.6
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	99	15	0	86.8
CDR3-IMGT (germline)	290	293	4	4	0	0	100
Total	N/A	N/A	291	263	28	0	90.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  R  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  A  
                    Query_3464   3    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGAGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACAGTTTTGCCA  92
V  90.4% (263/291)  IGHV5-51*03  2    ..G...............................A......G............................T...........C...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  H  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  T  D  S  E  T  H  Y  
                    Query_3464   93   CACACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTACTGACTCTGAAACCCACTACA  182
V  90.4% (263/291)  IGHV5-51*03  92   GCT.............................................................T...GG.........T...AGA....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  R  G  Q  V  T  I  S  A  D  R  S  I  T  T  A  Y  L  Q  W  N  T  L  R  A  S  D  
                    Query_3464   183  GCCCGTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACAGATCCATCACTACCGCCTACCTGCAGTGGAACACATTGAGGGCCTCGGACA  272
V  90.4% (263/291)  IGHV5-51*03  182  ............A..........................AG.......GC...................G..GCC...A...........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  I  Y  Y  C  A  T  L  N  R  G  L  R  A  Y  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  
                    Query_3464   273  CCGCCATATATTACTGCGCGACACTCAATCGAGGACTCCGTGCTTATTACTTTGATCATTGGGGCCAGGGAACCCTGGTCACAGTCTCCT  362
V  90.4% (263/291)  IGHV5-51*03  272  .......G........T....---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD3-16*01  28   ----------------------------------------.......-------------------------------------------  34
J  91.3% (42/46)    IGHJ4*02     3    -----------------------------------------------........CT.C.......................C.......  45

                                         
                                      S  
                    Query_3464   363  CAG  365
J  91.3% (42/46)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_239468

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           406     1e-115
IGHD4-17*01                                                                                           18.0    0.68  
IGHJ6*01                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAG	CTACGGTGA	GTCCGAGTACTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTC	ARDLATVSPSTFYYGMDV	289	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	278	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  T 
                    Query_3465   1    CAGATGCAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCTTCTGGTTACACCTTTACC  90
V  93.9% (278/296)  IGHV1-18*04  1    ...G.T....................T..........................................G....................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y 
                    Query_3465   91   AGTTACGGTATCACTTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTAT  180
V  93.9% (278/296)  IGHV1-18*04  91   ..C..........GC........A..............A................................C......A...........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  S  D  D 
                    Query_3465   181  GCACAGATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGATCTGACGAC  270
V  93.9% (278/296)  IGHV1-18*04  181  .......A.C...A..G.................C....................C..........C.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  T  F  Y  Y  G  M  D  V  W  G  Q  G  T  T 
                    Query_3465   271  ACGGCCGTGTATTACTGTGCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTCTGGGGTCAAGGGACCACG  360
V  93.9% (278/296)  IGHV1-18*04  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------------.........--------------------------------------------------  12
J  98.1% (52/53)    IGHJ6*01     11   -----------------------------------------------------........................G............  47

                                                      
                                       V  T  V  S  S  
                    Query_3465   361  GTCACCGTCTCCTCAG  376
J  98.1% (52/53)    IGHJ6*01     48   ................  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_42439

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           366     2e-103
IGHD5-12*01                                                                                           23.8    0.011 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCTGCTATCGGATACTTT	GTGGCTACGATT	CGGGTGAGGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTGCTATCGGATACTTTGTGGCTACGATTCGGGTGAGGGCATGGACGTC	ARLCYRILCGYDSGEGMDV	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  S  T  N  F  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_3466   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGGAGTACTAATTTCTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.8% (242/250)  IGHV4-39*01  49   ...............................G.........C....G..G..A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  T  S 
                    Query_3466   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCGCCATATCCGTAGACACGTCC  180
V  96.8% (242/250)  IGHV4-39*01  139  .....................................................................A....................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  D  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  C  Y  R  I  L  C 
                    Query_3466   181  AAGGACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACTCTGCTATCGGATACTTTGT  270
V  96.8% (242/250)  IGHV4-39*01  229  ...A.....................G............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD5-12*01  10   ----------------------------------------------------------------------------------------..  11

                                      3-IMGT----------------------->                                 
                                       G  Y  D  S  G  E  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3466   271  GGCTACGATTCGGGTGAGGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
D  100.0% (12/12)   IGHD5-12*01  12   ..........-----------------------------------------------------  21
J  100.0% (42/42)   IGHJ6*02     21   ---------------------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_42438

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     6e-103
IGHD2-2*02                                                                                            16.1    2.6   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCAAGCAGTCGAGATTGTCCCAGTAACGC	CTGCTATA	AGGAATCAGATCTTTACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCAAGCAGTCGAGATTGTCCCAGTAACGCCTGCTATAAGGAATCAGATCTTTACCCCTACTACGGTATGGACCTC	ASSSRDCPSNACYKESDLYPYYGMDL	261	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	51	0	0	100
CDR2-IMGT	126	146	21	20	1	0	95.2
FR3-IMGT	147	260	114	107	7	0	93.9
CDR3-IMGT (germline)	261	263	3	3	0	0	100
Total	N/A	N/A	263	248	15	0	94.3


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  A  L  S  C  T  V  S  G  G  S  I  R  R  H  Y  W  S  W  I  R  
                    Query_3467   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGGCCCTCAGTTGCACTGTCTCTGGTGGCTCCATCAGGAGGCACTACTGGAGCTGGATCCGGC  90
V  94.3% (248/263)  IGHV4-59*01  26   ................T............T......CC..........................T..TT.....................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  E  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_3467   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGAGAGCACCAATTACAACCCCTCCCTCAAGAGTCGCGTCACCA  180
V  94.3% (248/263)  IGHV4-59*01  116  ................................................G.........C.......................A.......  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  A  D  T  S  K  N  Q  V  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  S  
                    Query_3467   181  TATCAGCAGACACGTCCAAGAATCAGGTCTCCCTGAAACTAAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGTCAAGCA  270
V  94.3% (248/263)  IGHV4-59*01  206  ......T...............C...T..........G..G..........................................-------  288
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A        

                                      -------------------------CDR3-IMGT--------------------------------->                      
                                      S  R  D  C  P  S  N  A  C  Y  K  E  S  D  L  Y  P  Y  Y  G  M  D  L  W  G  Q  G  T  T  V  
                    Query_3467   271  GTCGAGATTGTCCCAGTAACGCCTGCTATAAGGAATCAGATCTTTACCCCTACTACGGTATGGACCTCTGGGGCCAAGGGACCACGGTCG  360
D  100.0% (8/8)     IGHD2-2*02   22   ----------------------........------------------------------------------------------------  29
J  96.2% (50/52)    IGHJ6*02     11   -------------------------------------------------................G.......................A  51

                                                 
                                      A  V  S  S 
                    Query_3467   361  CCGTCTCCTCA  371
J  96.2% (50/52)    IGHJ6*02     52   ...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_231670

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           383     1e-108
IGHD3-10*01                                                                                           23.8    0.013 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTCCGTCGGGGCGTGGA	TATGACTATGGTTCG	TTAGGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTCCGTCGGGGCGTGGATATGACTATGGTTCGTTAGGGTACTACTTCTTCGGCATGGACGTC	ARSPSGRGYDYGSLGYYFFGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  T  P  G  S  S  V  K  V  S  C  K  A  P  G  G  T  F  K  N  Y
                    Query_3468   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGACGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTCCTGGAGGCACCTTCAAAAATTA  90
V  92.4% (267/289)  IGHV1-69*01  6    ..................G.............A..................................T...............GC.GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  S  I  L  I  F  G  T  P  N  Y  A  Q
                    Query_3468   91   TGCTATCAGCTGGGTGCGTCAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGAAGCATCCTTATCTTTGGCACACCAAACTACGCACA  180
V  92.4% (267/289)  IGHV1-69*01  96   ..................A...................................G.T.....C.........T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  A  I  T  A  D  E  S  T  S  T  V  Y  M  E  L  R  S  L  R  F  E  D  T  A
                    Query_3468   181  GAAATTCCAGGGCAGAGTCGCGATTACCGCGGACGAATCCACCAGTACAGTCTACATGGAGCTGCGCAGCCTAAGATTTGAGGACACGGC  270
V  92.4% (267/289)  IGHV1-69*01  186  ...G...............A......................G..C....C.............A.......G....C............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  Y  C  A  R  S  P  S  G  R  G  Y  D  Y  G  S  L  G  Y  Y  F  F  G  M  D  V  W  G  Q
                    Query_3468   271  CGTCTATTACTGTGCGAGATCTCCGTCGGGGCGTGGATATGACTATGGTTCGTTAGGGTACTACTTCTTCGGCATGGACGTCTGGGGCCA  360
V  92.4% (267/289)  IGHV1-69*01  276  ...G...............-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  93.3% (14/15)    IGHD3-10*01  2    -------------------------------------...T...........--------------------------------------  16
J  93.0% (53/57)    IGHJ6*02     6    ----------------------------------------------------------.......A..A...T.................  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_3468   361  AGGAACCACGGTCACCGTCTCCTCA  385
J  93.0% (53/57)    IGHJ6*02     38   ...G.....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_231671

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD3-3*01                                                                                            12.2    31   
IGHJ3*01                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCT	TTACGA	GGGGCTAACTTTTCCTT	TCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCTTTACGAGGGGCTAACTTTTCCTTTC	ARDLYEGLTFPF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3469   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTTCTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  91.0% (223/245)  IGHV4-59*01  49   ..........................................AG.....A........................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  N  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  N  S 
                    Query_3469   91   TGGCTAGGATATATCAATTACACTGGGAGTACCAACTACAATCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAACAGC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A.T..G......T......G......C...........C..................G.........................G.A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  E  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  Y  E  G  L  T  F  P 
                    Query_3469   181  CAATTCTCCCTGGAGTTGTCTTCTGTGACCGCTGCGGACACGGCCGTGTACTATTGTGCGAGAGACCTTTACGAGGGGCTAACTTTTCCT  270
V  91.0% (223/245)  IGHV4-59*01  229  ..G.........A..C..AGC.............................T..C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-3*01   4    --------------------------------------------------------------------......----------------  9

                                      -->                                  
                                       F  W  G  P  G  T  M  V  T  V  S  S  
                    Query_3469   271  TTCTGGGGCCCAGGGACAATGGTCACCGTCTCCTCAG  307
J  94.4% (34/36)    IGHJ3*01     15   -.........A.....................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_42897

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            361     4e-102
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	TTGGCAATTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGGCAATTCCTACGCTATGGACGTC	ARVGNSYAMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3470  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-7*01  47   .........................................................G................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  H  D  G  S  E  K  K  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3470  91   AATGGGTGGCCAACATAAAACACGATGGAAGTGAGAAAAAGTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (240/249)  IGHV3-7*01  137  .G.................G..A...............T.C.................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                     K  N  S  L  Y  L  Q  V  T  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  N  S  Y  A  M  
                    Query_3470  181  AGAACTCACTGTATCTGCAAGTGACCAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGTTGGCAATTCCTACGCTATGG  270
V  96.4% (240/249)  IGHV3-7*01  227  ....................A...A...........................G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  98.0% (48/49)    IGHJ6*02    14   -------------------------------------------------------------------------------.....G.....  24

                                     ---->                                 
                                     D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3470  271  ACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  308
J  98.0% (48/49)    IGHJ6*02    25   ......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_331204

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            363     2e-102
IGHD4-17*01                                                                                           19.9    0.17  
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD4-17*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	GTTCTCCCCAAAA	TGATTACAGTGACTAC	GCCGAGACT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATAGTTCTCCCCAAAATGATTACAGTGACTACGCCGAGACTTACTACTATGGTATGGACGTC	AKDSSPQNDYSDYAETYYYGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	252	10	10	0	0	100
Total	N/A	N/A	252	242	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  D  Y  A  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_3471   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGGTGACTATGCCATGTACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.0% (242/252)  IGHV3-9*01   47   ..........................................A...T.........C.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  T  *  H  S  G  T  V  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3471   91   AGTGGGTCTCAGGTATTACTTAGCATAGTGGTACAGTAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (242/252)  IGHV3-9*01   137  ..................G..G.A.........GCA......................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  S  E  D  T  A  L  Y  Y  C  A  K  D  S  S  P  Q  N  D  
                    Query_3471   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGATCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATAGTTCTCCCCAAAATGATT  270
V  96.0% (242/252)  IGHV3-9*01   227  ...................................G....................................------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  87.5% (14/16)    IGHD4-17*01  1    -------------------------------------------------------------------------------------...C.  5

                                      --CDR3-IMGT----------------------------->                                 
                                      Y  S  D  Y  A  E  T  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_3471   271  ACAGTGACTACGCCGAGACTTACTACTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  344
D  87.5% (14/16)    IGHD4-17*01  6    ..G........---------------------------------------------------------------  16
J  96.3% (52/54)    IGHJ6*02     9    --------------------........C..................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_85332

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           311     4e-87
IGHD3-10*01                                                                                           10.3    117  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGA	CTTCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGACTTCAGGCCTTTGACTCC	ARGGLQAFDS	246	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	224	25	0	90


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  S  G  G  F  Y  W  T  W  I  R  Q  H  P  G  K  G  
                    Query_3472   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAACAGTGGTGGATTCTACTGGACTTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  90.0% (224/249)  IGHV4-31*02  50   .....TCC...A...........................G.........T.A........GC............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  F  Y  T  G  H  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  L  D  T  S  
                    Query_3472   94   TAGAGTGGATTGGTTACATCTTTTACACTGGACACACCTACTACAATCCGTCCCTCAGGAGTCGACTTACCATATCACTAGACACATCTG  183
V  90.0% (224/249)  IGHV4-31*02  140  .G...........G.......A.....G...GAG............C..........A.......G...........G.......G...A  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      E  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  L  Q  A  F  D  
                    Query_3472   184  AGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGGGGACTTCAGGCCTTTGACT  273
V  90.0% (224/249)  IGHV4-31*02  230  ...................G.....C..........................G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  16   ---------------------------------------------------------------------.....----------------  20
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------........  12

                                      ->                                  
                                      S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3472   274  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.7% (43/44)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_331206

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     4e-95
IGHD3-10*02                                                                                           14.1    8.2  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTGGGTGGAATTA	ACTATGT	CTAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTGGGTGGAATTAACTATGTCTACGACTAC	AKDVGGINYVYDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  A  M  S  W  V  R  Q  A  P  G  R  G  P  
                    Query_3473   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTTAGCGCCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAGGGGGCCGG  90
V  93.2% (233/250)  IGHV3-23*01  47   ...............................A............AG............C......................A.....T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  T  G  G  R  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  S  D  N  S  
                    Query_3473   91   AGTGGGTCTCAACTATCAGTGGTACTGGTGGTAGAACATATTACGCAGACTCCGTGAAAGGCCGATTCACCATCTCCAGCGACAATTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  ...........G....T.......G.........C.....C.................G.....G..............A..........  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  V  G  G  I  N  Y  
                    Query_3473   181  AGAACACACTGTTTCTGCAAATGAACAGCCTCAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATGTGGGTGGAATTAACTATG  270
V  93.2% (233/250)  IGHV3-23*01  227  .......G....A..................G......................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-10*02  6    ------------------------------------------------------------------------------------......  11

                                      ---------->                                  
                                      V  Y  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_3473   271  TCTACGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  315
D  100.0% (7/7)     IGHD3-10*02  12   .--------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -----..................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_331207

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     9e-100
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATCGTGGTG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATCGTGGTGACTACTTTGACCAC	ARGLHYYDRGDYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  R  V  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3474   1    ACCCTGTCCCTCACCTGCACTGTCTCTCGTGTCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.2% (238/250)  IGHV4-31*03  49   ...........................G...G...................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_3474   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAATAAGTCCCTCAAGAGTCGAATTACCATATCGGTAGACACGTCT  180
V  95.2% (238/250)  IGHV4-31*03  139  ..................................G............CCC................G..........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R 
                    Query_3474   181  AAGAACCAGTTCTCCCTGACGCTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCCATTACTATGATCGT  270
V  95.2% (238/250)  IGHV4-31*03  229  ...................A.....G...........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (16/18)    IGHD3-22*01  3    ----------------------------------------------------------------------------...........A..  16

                                      ----------------->                                  
                                       G  D  Y  F  D  H  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_3474   271  GGTGACTACTTTGACCACTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  322
D  88.9% (16/18)    IGHD3-22*01  17   A...------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    ----...........T....................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_331201

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           307     1e-85
IGHD1-7*01                                                                                            27.6    7e-04
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAGAGGGG	ATAACTGGAACTAC	GGG	TACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAGAGGGGATAACTGGAACTACGGGTACTCTGACTAT	AKDRGDNWNYGYSDY	232	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	10	1	0	90.9
CDR1-IMGT	19	42	24	19	5	0	79.2
FR2-IMGT	43	93	51	49	2	0	96.1
CDR2-IMGT	94	117	24	20	4	0	83.3
FR3-IMGT	118	231	114	108	6	0	94.7
CDR3-IMGT (germline)	232	239	8	8	0	0	100
Total	N/A	N/A	232	214	18	0	92.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  S  F  S  T  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  L  S  G  L  
                    Query_3475   8    GTGCAGTCTCTGGATTCAGCTTTAGTACGTATGGCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGCTCTCAGGTCTTA  97
V  92.2% (214/232)  IGHV3-23*01  65   ......C...........C......C.GC....C...........................................G......C.A...  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      T  G  S  G  G  S  T  Y  Y  A  G  S  V  K  G  R  F  T  I  S  S  D  N  A  K  N  T  L  Y  L  
                    Query_3475   98   CTGGTAGTGGTGGAAGCACGTACTACGCAGGCTCCGTGAAGGGCCGGTTCACCATCTCCAGCGACAATGCCAAGAACACGCTGTATCTGC  187
V  92.2% (214/232)  IGHV3-23*01  155  G............T.....A..........A..............................A......T.....................  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      Q  M  N  S  L  R  A  D  D  T  A  I  Y  Y  C  A  K  D  R  G  D  N  W  N  Y  G  Y  S  D  Y  
                    Query_3475   188  AAATGAACAGCCTCAGAGCCGACGACACGGCCATATATTACTGTGCGAAAGATAGAGGGGATAACTGGAACTACGGGTACTCTGACTATT  277
V  92.2% (214/232)  IGHV3-23*01  245  .............G........G.........G...................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (14/14)   IGHD1-7*01   4    ------------------------------------------------------------..............----------------  17
J  93.5% (43/46)    IGHJ4*02     3    -----------------------------------------------------------------------------....T......C.  15

                                                                       
                                      W  G  Q  G  N  L  V  T  V  S  S  
                    Query_3475   278  GGGGCCAGGGAAACCTGGTCACCGTCTCCTCAG  310
J  93.5% (43/46)    IGHJ4*02     16   ............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_218814

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           305     3e-85
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAACA	TATGACT	TATAGCAGT	AGTCCATTA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATATGACTTATAGCAGTAGTCCATTAGACTAC	AKHMTYSSSPLDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	13	8	0	61.9
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	223	28	0	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  D  Y  Y  W  G  W  V  R  Q  P  P  G  R  G 
                    Query_3476   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGTAGTGGTGACTACTACTGGGGCTGGGTCCGCCAGCCCCCAGGGAGGGGG  90
V  88.8% (223/251)  IGHV4-39*01  49   ..................A......................C...A..AGT...............A..................A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  Y  N  T  R  Y  P  Y  Y  S  L  S  L  K  S  R  V  T  I  S  V  D  S  S 
                    Query_3476   91   CTGGAGTGGCTTGGGAGTATCTATAATACTAGATATCCCTACTATAGTTTGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACTCGTCC  180
V  88.8% (223/251)  IGHV4-39*01  139  .........A..............T...G.G.GAGCA.......C.ACCC..................................A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  E  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  H  M  T  Y  S  S  S 
                    Query_3476   181  AAGAACGAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTTTATTTCTGTGCGAAACATATGACTTATAGCAGTAGT  270
V  88.8% (223/251)  IGHV4-39*01  229  ......C............A.................................G....A........G...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD6-19*01  4    ------------------------------------------------------------------------------.........---  12

                                      ----------->                                  
                                       P  L  D  Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_3476   271  CCATTAGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCTTCAG  316
J  95.0% (38/40)    IGHJ4*02     9    ------.............A.....................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_331203

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           372     2e-105
IGHD2-2*01                                                                                            41.1    7e-08 
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGCGCGAG	ATTGTAGTAGTACCAGCTGCT	TTGGAACTGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCGCGAGATTGTAGTAGTACCAGCTGCTTTGGAACTGGTGCTTTTGATATC	ARGARDCSSTSCFGTGAFDI	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  D  Y  Y  W  N  W  I  R  Q  H  P  E  K  G 
                    Query_3477   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGATGATTACTACTGGAACTGGATCCGCCAGCACCCAGAGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*01  49   ..............................................G..G...........G....................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 
                    Query_3477   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACGTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*01  139  ......................................C...................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  R  D  C  S  S 
                    Query_3477   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGGGGCGCGAGATTGTAGTAGT  270
V  97.6% (244/250)  IGHV4-31*01  229  .....................................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (21/21)   IGHD2-2*01   6    -------------------------------------------------------------------------------...........  16

                                      DR3-IMGT------------------------>                                  
                                       T  S  C  F  G  T  G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3477   271  ACCAGCTGCTTTGGAACTGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  337
D  100.0% (21/21)   IGHD2-2*01   17   ..........---------------------------------------------------------  26
J  100.0% (47/47)   IGHJ3*02     4    --------------------...............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_114856

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           372     3e-105
IGHD6-19*01                                                                                           14.1    9.8   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGGCAGGAATTACTTCCAGCGCC	GGCTGGT	CCGGACC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGGCAGGAATTACTTCCAGCGCCGGCTGGTCCGGACCCTTTGACTAC	ARWAGITSSAGWSGPFDY	290	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	72	3	0	96
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	46	5	0	90.2
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	101	13	0	88.6
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	294	266	28	0	90.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_3478   2    CAGATGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCGGGAGGCACCTTCAGC  91
V  90.5% (266/294)  IGHV1-69*01  1    ...G...................................................................T..T...............  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  H  P  F  S  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  M  I  V  P  K  F  G  T  A  R  T 
                    Query_3478   92   AGTCATCCTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGCCCTGAGTGGATGGGAATGATCGTCCCTAAATTTGGCACAGCAAGGACC  181
V  90.5% (266/294)  IGHV1-69*01  91   ..CT..G..A...............................G.T.............GG....A......TC.....T.......ACTA.  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  R  F  Q  D  R  V  T  I  T  A  D  E  S  T  S  T  I  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_3478   182  GCACAGAGGTTCCAGGACAGAGTCACGATTACCGCGGACGAATCCACGAGCACAATTTATATGGAGTTGAGCAGCCTGAGATCTGAGGAC  271
V  90.5% (266/294)  IGHV1-69*01  181  .......A........G.....................................GCC..C......C.......................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  F  C  A  R  W  A  G  I  T  S  S  A  G  W  S  G  P  F  D  Y  W  G  Q  G  T  L 
                    Query_3478   272  ACGGCCGTCTATTTCTGTGCGAGATGGGCAGGAATTACTTCCAGCGCCGGCTGGTCCGGACCCTTTGACTACTGGGGCCAGGGAACCCTG  361
V  90.5% (266/294)  IGHV1-69*01  271  ........G....A..........------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD6-19*01  13   ------------------------------------------------.......-----------------------------------  19
J  97.7% (43/44)    IGHJ4*02     5    --------------------------------------------------------------............................  32

                                                      
                                       V  T  V  S  A  
                    Query_3478   362  GTCACCGTCTCCGCAG  377
J  97.7% (43/44)    IGHJ4*02     33   ............T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_85339

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           10.3    131   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	GCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCCACTTTGACTAC	ARDLTWGHFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_3479   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  95.2% (276/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  Y  A  Q 
                    Query_3479   92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTATGCACAG  181
V  95.2% (276/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3479   182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  R  A  R  D  L  T  W  G  H  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_3479   272  ATATATTACCGTGCGAGAGATCTCACGTGGGGCCACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  95.2% (276/290)  IGHV1-18*01  277  G.G......T..........-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.8% (44/45)    IGHJ4*02     4    ----------------------------------........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_85338

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD3-16*02                                                                                           18.0    0.68  
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATGATAGTGGC	AGTTATCTTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGCAGTTATCTTTATTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_3480   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCCCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTACCAACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    .............................................T...................G...........G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  D  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_3480   91   CTGGATCGACTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G...................................................................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  I  T  I  S  A  D  N  S  I  G  T  A  Y  L  Q  L  H  S  L  K  A  S  D  T  A
                    Query_3480   181  GTCCTTCGAAGGCCAAATCACCATCTCAGCCGACAACTCCATCGGCACCGCCTACCTGCAGTTGCACAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .......C.......GG...................G......A..................G.AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_3480   271  CATGTATTACTGTGCGAGACATGGGGATGATAGTGGCAGTTATCTTTATTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD3-16*02  23   -------------------------------------.......G....-----------------------------------------  34
J  98.1% (53/54)    IGHJ6*02     9    -------------------------------------------------....A....................................  49

                                                   
                                        T  V  S  S 
                    Query_3480   361  CACCGTCTCCTCA  373
J  98.1% (53/54)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_331208

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           369     2e-104
IGHD1-7*01                                                                                            16.1    2.5   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ACTGGAAATAC	ATAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTC	ARDRTGNTYYGLDV	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	16	8	0	66.7
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	101	13	0	88.6
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	266	30	0	89.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S 
                    Query_3481   1    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTATACTTTCAGT  90
V  89.9% (266/296)  IGHV1-18*01  1    .....T.....G.........................A.................................T........C..C..T.CC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  D  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  S  F  N  G  N  T  I  Y 
                    Query_3481   91   AATGATGGTATTAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCTCTTTCAATGGAAACACAATCTAC  180
V  89.9% (266/296)  IGHV1-18*01  91   .GCT.......C............................................A.........G...A......T.......A...T  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  L  Q  G  R  V  T  M  T  T  E  T  S  T  T  T  A  Y  M  E  L  R  S  L  T  Y  D  D 
                    Query_3481   181  GCACAGAATTTACAGGGCAGAGTTACCATGACCACAGAAACTTCTACGACCACAGCCTACATGGAGCTGAGGAGCCTGACATATGACGAC  270
V  89.9% (266/296)  IGHV1-18*01  181  ........GC.C...........C..............C..A..C....G.............................G..C.......  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  F  C  A  R  D  R  T  G  N  T  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_3481   271  ACGGCCGTGTATTTCTGTGCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  360
V  89.9% (266/296)  IGHV1-18*01  271  .............A............----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  90.9% (10/11)    IGHD1-7*01   7    ------------------------------.......C...-------------------------------------------------  17
J  95.8% (46/48)    IGHJ6*02     15   ---------------------------------------------......A....C.................................  59

                                         
                                       S 
                    Query_3481   361  TCA  363
J  95.8% (46/48)    IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_347397

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           336     1e-94
IGHD1-1*01                                                                                            18.0    0.56 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAG	TGGAACGAC	GGG	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGAGTGGAACGACGGGGACGAC	ARHEWNDGDD	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	233	18	0	92.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  N  N  L  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_3482   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGAGACTCCATCAGCAATAATCTTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  92.8% (233/251)  IGHV4-39*01  49   ...................C.........T.G...........G..G.AG.......................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  A  I  Y  Y  T  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3482   91   CTGGAGTGGATTGGAGCTATCTATTATACTGGAAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  92.8% (233/251)  IGHV4-39*01  139  ..............GAG...........G...G.G.......................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       K  N  K  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  E  W  N  D  G  D 
                    Query_3482   181  AAGAACAAGTTCTCCCTGAAGCTGACCTCTGTCACCGCCGCAGACACGGCTGTGTACTACTGTGCGAGACATGAGTGGAACGACGGGGAC  270
V  92.8% (233/251)  IGHV4-39*01  229  ......C..................G......G.......................T..............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD1-1*01   9    ---------------------------------------------------------------------------.........------  17
J  95.0% (38/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3482   271  GACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  307
J  95.0% (38/40)    IGHJ4*02     12   T.............A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_347396

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            431     4e-123
IGHD3-3*01                                                                                            19.9    0.18  
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGCCGGTCCTA	TTTTGGAGTG	ATACGAGAGCGGTGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGCCGGTCCTATTTTGGAGTGATACGAGAGCGGTGTTACTTTGACTAC	ARCRSYFGVIRERCYFDY	289	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	24	0	0	100
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	294	285	9	0	96.9


Alignments

                                     <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                      Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_3483  1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACC  90
V  96.9% (285/294)  IGHV1-2*04  1    ...G...................G..................................................................  90
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                     GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                      G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  N  G  D  T  H  Y 
                    Query_3483  91   GGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAATGGTGACACACATTAT  180
V  96.9% (285/294)  IGHV1-2*04  91   .........................................................................G.....G....A.C...  180
                                      G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                     -----------------------------------------------FR3-IMGT-----------------------------------
                                      A  L  E  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  K  S  D  D 
                    Query_3483  181  GCACTGGAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAAATCTGACGAC  270
V  96.9% (285/294)  IGHV1-2*04  181  ....A.A........................................................................G..........  270
                                      A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                     -----------------><----------------------CDR3-IMGT--------------------->                  
                                      T  A  V  Y  Y  C  A  R  C  R  S  Y  F  G  V  I  R  E  R  C  Y  F  D  Y  W  G  Q  G  T  L 
                    Query_3483  271  ACGGCCGTGTATTACTGTGCGAGATGCCGGTCCTATTTTGGAGTGATACGAGAGCGGTGTTACTTTGACTACTGGGGCCAGGGAACCCTG  360
V  96.9% (285/294)  IGHV1-2*04  271  ........................------------------------------------------------------------------  294
                                      T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (10/10)   IGHD3-3*01  11   -----------------------------------..........---------------------------------------------  20
J  100.0% (46/46)   IGHJ4*02    3    ------------------------------------------------------------..............................  32

                                                     
                                      V  T  V  S  S  
                    Query_3483  361  GTCACCGTCTCCTCAG  376
J  100.0% (46/46)   IGHJ4*02    33   ................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_15279

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           330     1e-92
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-1*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GTC	TACAACTGG	CGGGAGGGGGCGTTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTCTACAACTGGCGGGAGGGGGCGTTCACTAC	VYNWREGAFTT	242	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	29	28	0	1	96.6
CDR1-IMGT	29	52	24	21	3	0	87.5
FR2-IMGT	53	103	51	50	1	0	98
CDR2-IMGT	104	127	24	23	1	0	95.8
FR3-IMGT	128	241	114	106	8	0	93
CDR3-IMGT (germline)	242	242	1	1	0	0	100
Total	N/A	N/A	243	229	13	1	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L   D  S  P  V  Q  R  L  D  S  P  S  A  I  M  A  C  T  G  S  A  R  L  Q  A  R  G  W 
                    Query_3484   1    GGTCCCT-AGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGCAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  89
V  94.2% (229/243)  IGHV3-33*01  47   .......G...................................T.GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       S  G  W  Q  L  Y  G  M  M  E  V  T  N  T  M  Q  T  P  S  R  A  D  S  P  Y  P  E  T  I  P 
                    Query_3484   90   AGTGGGTGGCAATTATATGGTATGATGGAAGTAACAAACACTATGCAGACTCCGTCCAGGGCCGATTCACCATATCCAGAGACAATTCCA  179
V  94.2% (229/243)  IGHV3-33*01  137  ...........G......................T...T................GA................C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                       R  T  R  C  I  C  K  *  T  A  *  E  S  T  T  R  L  Y  I  T  V  V  Y  N  W  R  E  G  A  F 
                    Query_3484   180  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCTGTATATTACTGTGGTCTACAACTGGCGGGAGGGGGCGTTC  269
V  94.2% (229/243)  IGHV3-33*01  227  ........C...........................C...G...........G..........---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (9/9)     IGHD1-1*01   3    ------------------------------------------------------------------.........---------------  11

                                      ---->                                  
                                       T  T  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_3484   270  ACTACAGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  308
J  97.4% (38/39)    IGHJ4*02     10   .....T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_347393

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           406     1e-115
IGHD1-26*01                                                                                           10.3    131   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  Y 
                    Query_3485   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACCGACTAT  91
V  94.8% (275/290)  IGHV1-18*01  7    .............................................................................C......AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  W  I  S  A  Y  T  G  N  T  K  N  A  Q 
                    Query_3485   92   GGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGATGGATCAGCGCTTACACTGGTAATACAAAAAATGCACAA  181
V  94.8% (275/290)  IGHV1-18*01  97   .......G.....................................A.....................A......C.....CT.......G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  V  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3485   182  AAAGTCCAGGGCAGAGTGACCATGACCACAGACACATCCACGAGAACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (275/290)  IGHV1-18*01  187  ..GC.............C..........................C...............C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_3485   272  GTGTATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  94.8% (275/290)  IGHV1-18*01  277  ....................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_347392

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGAGTAGA	TATAACTTTGGTTC	T	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTAGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSRYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  R  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_3486   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCGTTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.A...A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_3486   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCGGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A..A................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  Y  L  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  R  Y  N  F 
                    Query_3486   181  CAGTTCTCCCTGAAGCTGAGCTATCTGACCGCTGCGGACGCGGCCGTGTATTACTGTGCGAGAGATCCTACCGGGAGTAGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  ......................C.G..............A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  85.7% (12/14)    IGHD3-10*01  2    ---------------------------------------------------------------------------------...T...A.  10

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3486   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  85.7% (12/14)    IGHD3-10*01  11   .....--------------------------------------------------  15
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_126763

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           408     4e-116
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGGAGCTGGGAAGATT	TAGCAGGGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGGAGCTGGGAAGATTTAGCAGGGGCTGGCGATAC	ARPELGRFSRGWRY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  T  F  G  T  Y
                    Query_3487   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTGGCACCTA  90
V  95.2% (275/289)  IGHV5-51*03  6    .............................................................A...............G....AC..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  K  Y  S  P
                    Query_3487   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGACACGAAATACAGTCC  180
V  95.2% (275/289)  IGHV5-51*03  96   ........G..................................................................T..C.G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3487   181  GTCCTTCCGAGGCCAGGTCACCATATCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (275/289)  IGHV5-51*03  186  ........A...............C....C...............C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  P  E  L  G  R  F  S  R  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3487   271  CATGTATTACTGTGCGAGACCGGAGCTGGGAAGATTTAGCAGGGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  95.2% (275/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  92.3% (12/13)    IGHD6-19*01  6    ------------------------------------......T......----------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   ----------------------------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_15272

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*04                                                                                           311     4e-87
IGHD6-19*01                                                                                           12.2    31   
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*04	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTAAAGACCCCGGAGGGC	GGCTGG	C	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTAAAGACCCCGGAGGGCGGCTGGCACTACTACTACGGCTTGGACGTC	ARVKTPEGGWHYYYGLDV	230	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	20	4	0	83.3
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	21	3	0	87.5
FR3-IMGT	116	229	114	110	4	0	96.5
CDR3-IMGT (germline)	230	234	5	5	0	0	100
Total	N/A	N/A	221	210	11	0	95


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  S  F  S  D  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  G 
                    Query_3488   14   TCTGGATTCAGCTTCAGTGACTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGCAGTGGG  103
V  95.0% (210/221)  IGHV3-21*04  73   ..........C.......AG.....G.........................................................T...A.T  162
                                       S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  I  N 
                    Query_3488   104  AGTAGTTACATATACTACGCAGACTCAGTAAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATTAAC  193
V  95.0% (210/221)  IGHV3-21*04  163  .............................G........................................................G...  252
                                       S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><----------------------CDR3-IMGT--------------------->
                                       S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  K  T  P  E  G  G  W  H  Y  Y  Y  G  L  D  V 
                    Query_3488   194  AGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAGGGTAAAGACCCCGGAGGGCGGCTGGCACTACTACTACGGCTTGGACGTC  283
V  95.0% (210/221)  IGHV3-21*04  253  ..............G...........G..............-------------------------------------------------  293
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                    
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------......------------------------  18
J  96.4% (54/56)    IGHJ6*02     7    -------------------------------------------------------------------.............TA........  29

                                                                       
                                       W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3488   284  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  316
J  96.4% (54/56)    IGHJ6*02     30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_15271

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            394     6e-112
IGHD6-19*01                                                                                           27.6    8e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD6-19*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GAAGAG	ATAGCAGTGGCTGG	CTCGTCA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGAAGAGATAGCAGTGGCTGGCTCGTCAACTTTGACTAC	ARGRDSSGWLVNFDY	269	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	76	30	29	1	0	96.7
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	154	27	25	2	0	92.6
FR3-IMGT	155	268	114	109	5	0	95.6
CDR3-IMGT (germline)	269	275	7	7	0	0	100
Total	N/A	N/A	274	263	11	0	96


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  T  S  A  A  W  N  W  I  R 
                    Query_3489   2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCACCAGTGCTGCTTGGAACTGGATCAGG  91
V  96.0% (263/274)  IGHV6-1*01   31   ........G...T.G.................................................A.........................  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  *  H  N  D  Y  A  I  S  V  K  S  R 
                    Query_3489   92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTAGCATAATGATTATGCAATATCTGTCAAAAGTCGA  181
V  96.0% (263/274)  IGHV6-1*01   121  .......................................................G.T..............G.......G.........  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  N  I  N  P  D  T  P  K  N  Q  F  S  L  H  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_3489   182  ATAAACATCAACCCAGACACACCCAAGAACCAGTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCA  271
V  96.0% (263/274)  IGHV6-1*01   211  ....C................T......................G.............................................  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      ---------------CDR3-IMGT----------------->                                
                                       R  G  R  D  S  S  G  W  L  V  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3489   272  AGAGGAAGAGATAGCAGTGGCTGGCTCGTCAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  345
V  96.0% (263/274)  IGHV6-1*01   301  ....----------------------------------------------------------------------  304
                                       R                                                                        
D  100.0% (14/14)   IGHD6-19*01  5    ----------..............--------------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     4    -------------------------------...........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_15270

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           308     4e-86
IGHD6-19*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTGG	AGCAGTGGCTGG	CCGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTGGAGCAGTGGCTGGCCGGTTTGACTTC	AREGGAVAGRFDF	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	224	27	0	89.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  R  G  S  V  S  S  G  G  Y  H  W  S  W  I  R  Q  T  P  G  R  G 
                    Query_3490   1    ACCCTGTCCCTCACCTGCTCTGTCTCTCGTGGCTCCGTCAGCAGTGGGGGTTATCACTGGTCCTGGATCCGGCAGACCCCAGGCAGGGGA  90
V  89.2% (224/251)  IGHV4-61*08  49   ..................A........G...................T.....CT.....AG.............C.......G.A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  F  T  G  T  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  A  D  M  S 
                    Query_3490   91   CTGGAGTGGATTGGCTATATCCACTTCACTGGGACCACCAAGTACAACCCCTCCCTTAAGAGTCGAGTCAGCATATCAGCAGACATGTCC  180
V  89.2% (224/251)  IGHV4-61*08  139  ..............G......T.T.A..G.....G......C..............C.............C........T.....C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  A  V  A  G 
                    Query_3490   181  AAGAACCAATTCTCCCTGAACCTGAGGTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTGCGAGAGAGGGTGGAGCAGTGGCTGGC  270
V  89.2% (224/251)  IGHV4-61*08  229  ........G...........G.....C..........................G..T..C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD6-19*01  7    -----------------------------------------------------------------------------............-  18

                                      ----------->                                  
                                       R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3490   271  CGGTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02     6    ---.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_15276

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD2-21*01                                                                                           10.3    123   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TCTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTCTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFLQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3491   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTTCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (240/248)  IGHV4-31*03  49   ...............................G..C......C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  I  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3491   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCATCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCT  180
V  96.8% (240/248)  IGHV4-31*03  139  .....................................C..........C......................C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  L  Q  E 
                    Query_3491   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTTCTCTATTTCTCCAAGAA  270
V  96.8% (240/248)  IGHV4-31*03  229  ..........................C.........................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD2-21*01  22   ---------------------------------------------------------------------------.....----------  26

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3491   271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_347399

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           403     1e-114
IGHD4-17*01                                                                                           18.0    0.68  
IGHJ6*01                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAG	CTACGGTGA	GTCCGAGTACTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTC	ARDLATVSPSTFYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  T  S  Y 
                    Query_3492   2    CAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCTTCTGGTTACACCTTTACCAGTTAC  91
V  94.5% (274/290)  IGHV1-18*04  7    ....................T..........................................G......................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_3492   92   GGTATCACTTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  181
V  94.5% (274/290)  IGHV1-18*04  97   .......GC........A..............A................................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  S  D  D  T  A 
                    Query_3492   182  ATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.5% (274/290)  IGHV1-18*04  187  .A.C...A..G.................C....................C..........C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  T  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_3492   272  GTGTATTACTGTGCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTCTGGGGTCAAGGGACCACGGTCACC  361
V  94.5% (274/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------.........--------------------------------------------------------  12
J  98.1% (52/53)    IGHJ6*01     11   -----------------------------------------------........................G..................  53

                                                
                                       V  S  S  
                    Query_3492   362  GTCTCCTCAG  371
J  98.1% (52/53)    IGHJ6*01     54   ..........  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_347398

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD3-16*01                                                                                           14.1    8.5   
IGHJ4*02                                                                                              62.2    6e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	261	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	20	4	0	83.3
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	20	1	0	95.2
FR3-IMGT	147	260	114	105	9	0	92.1
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	250	17	0	93.6


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  A  T  H  Y  W  S  W  I  R  
                    Query_3493   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGC  90
V  93.6% (250/267)  IGHV4-59*01  26   ................T.............................................AG..G.T.....................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  N  G  L  E  W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  
                    Query_3493   91   AGCCCCCAGGGAACGGACTGGAGTGGATTGGATATATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCA  180
V  93.6% (250/267)  IGHV4-59*01  116  .............G.................G...................G.....A............................A...  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  R  S  N  N  R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_3493   181  TATCAGTAGACAGGTCCAACAACCGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAG  270
V  93.6% (250/267)  IGHV4-59*01  206  ............C......G....AG............C...............................G.....C..........---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -CDR3-IMGT--------->                                  
                                      D  Y  D  I  G  W  S  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3493   271  ATTATGACATTGGCTGGAGCTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (7/7)     IGHD3-16*01  3    .......-----------------------------------------------  9
J  97.1% (34/35)    IGHJ4*02     14   -------------------........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_237483

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            315     5e-88
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCTCTCCTAGAAGTGACTGGGCGAGGG	GGGGGAGT	N/A	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCTCTCCTAGAAGTGACTGGGCGAGGGGGGGGAGTTGGTTCGACCCC	AASPRSDWARGGSWFDP	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  G  I  T  Y  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_3494   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCGGCATTACTTACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.4% (222/243)  IGHV4-4*02   49   .......................................A...G..G.A.........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  A  Y  Y  S  G  S  N  N  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  K  S  K 
                    Query_3494   91   GAGTGGATTGGGGAAGCCTATTATAGTGGGAGCAACAACTACAACCCGTCCCTCAAAAGTCGAGTCGCCATATCAGTGGACAAGTCCAAG  180
V  91.4% (222/243)  IGHV4-4*02   139  ...............AT....C............C.....................G.........A..........A............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  E  F  S  L  R  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  A  S  P  R  S  D  W  A  R 
                    Query_3494   181  AACGAGTTTTCCCTGAGGTTAACGTCTATGACCGCCGCGGACACGGCCGTATATTATTGTGCGGCCTCTCCTAGAAGTGACTGGGCGAGG  270
V  91.4% (222/243)  IGHV4-4*02   229  ...C....C.......A.C.G.GC...G......................G.....C......---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            

                                      -------------------->                                 
                                       G  G  S  W  F  D  P  W  D  Q  G  I  L  V  I  V  S  S 
                    Query_3494   271  GGGGGGAGTTGGTTCGACCCCTGGGACCAGGGAATCCTGGTCATCGTCTCCTCA  324
D  100.0% (8/8)     IGHD3-16*01  18   -........---------------------------------------------  25
J  93.3% (42/45)    IGHJ5*02     6    ---------................G........C........C..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_69037

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         383     1e-108
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCTTAAGGTCAATCGCGTC	CAGTGGCTGG	GCGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCA	ARHPLRSIASSGWAS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  G  E  V  K  K  P  W  E  S  L  R  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_3495     1    GCAGCTGGTGCAGTCTGGAGGAGAGGTGAAGAAGCCCTGGGAGTCTTTGAGGATTTCCTGTAAGGCTTCTGGATACACCTTTACCAACTA  90
V  92.4% (267/289)  IGHV5-10-1*01  6    ....................C.........A......G........C.......C..........G...........G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  R  Y  S  P
                    Query_3495     91   CTGGATCAGCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGACCCTAGTGACTCTTATACCCGCTACAGTCC  180
V  92.4% (267/289)  IGHV5-10-1*01  96   ......................A.....................................T..................AA......C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  D  G  N  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  M  A  S  D  T  A
                    Query_3495     181  GTCCTTCGACGGCAACGTCACCATCTCAGTTGACAAGTCCATCAGTACTGCCTATTTGCAGTGGAGCAGCCTGATGGCCTCGGACACCGC  270
V  92.4% (267/289)  IGHV5-10-1*01  186  .......C.A...C...............C...............C........CC..................A...............  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          M  Y  Y  C  A  R  H  P  L  R  S  I  A  S  S  G  W  A  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3495     271  CATGTATTATTGTGCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCATGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  92.4% (267/289)  IGHV5-10-1*01  276  .........C.........-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD6-19*01    9    ------------------------------------------..........--------------------------------------  18
J  100.0% (34/34)   IGHJ4*02       15   ----------------------------------------------------------................................  46

                                          
                                          
                    Query_3495     361  AG  362
J  100.0% (34/34)   IGHJ4*02       47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_69034

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD6-19*01                                                                                           12.2    30   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGACGGGT	TGGCTG	CCC	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGACGGGTTGGCTGCCCGACGAC	ARGTGWLPDD	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  Y  C  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3496   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTACTACTGCAACTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   ...............................G..........A..........G.G..................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  N  T  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  R  N 
                    Query_3496   91   TGGATTGGACATATCTACAACACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAGGAAC  180
V  93.4% (228/244)  IGHV4-59*01  139  ........GT.......TT...G.....G.............................................A..........A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  T  G  W  L  P  D  D  W 
                    Query_3496   181  CAGTTCTCCTTGAACCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGACGGGTTGGCTGCCCGACGACTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  .........C....G....G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  12   ------------------------------------------------------------------------......------------  17
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------...T.....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_3496   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.5% (39/40)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_237480

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-10*01                                                                                           10.3    118  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACA	GGGGA	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACAGGGGATACTACGGTATGGACGTC	ARDDRGYYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_3497   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTATTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   .....................................................C.A.....G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  H  Y  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S 
                    Query_3497   91   CTGGAGTGGATTGGGAACATCCATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ...............T.....T...................C.................G........T.....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  E  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  D  D  R  G  Y  Y  G 
                    Query_3497   181  AAGAACCAGTTCTCCCTGGAGCTGACCTCTATGACAGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGATGACAGGGGATACTACGGT  270
V  94.4% (237/251)  IGHV4-31*03  229  ..................A......G....G....T.................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------------.....---------  20
J  94.0% (47/50)    IGHJ6*02     12   ---------------------------------------------------------------------------------.........  20

                                      -------->                                
                                       M  D  V  W  G  Q  G  I  T  V  T  A  S  S
                    Query_3497   271  ATGGACGTCTGGGGCCAAGGGATTACGGTCACCGCCTCCTC  311
J  94.0% (47/50)    IGHJ6*02     21   ......................CC..........T......  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_69032

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-9*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCGGTT	GTATTACGATATCTTG	CGGCGGGGAGG	CTACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGTTGTATTACGATATCTTGCGGCGGGGAGGCTACAACGGTTTGGACGTC	ARGRLYYDILRRGGYNGLDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  V  G  S  F  S  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3498   1    ACCCTGTCCCTCACCTGCGCTGTCTATGTTGGGTCCTTCAGTGATTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (233/245)  IGHV4-34*01  49   ............................G..............G..............................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  N  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3498   91   TGGATTGGCGAAATCAATCATAGTGGATCCAACAGCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  ........G..................AG..C..A.......................................A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  D  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  L  Y  Y  D  I  L  R 
                    Query_3498   181  CAGTTCTCCCTGAAGCTGGACTCCGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCCGGTTGTATTACGATATCTTGCGG  270
V  95.1% (233/245)  IGHV4-34*01  229  ..................AG...T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  93.8% (15/16)    IGHD3-9*01   1    -----------------------------------------------------------------------............T...---  16

                                      GT------------------------>                                 
                                       R  G  G  Y  N  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3498   271  CGGGGAGGCTACAACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
J  96.2% (50/52)    IGHJ6*02     11   --------....T.....A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_69033

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           296     2e-82
IGHD1-1*01                                                                                            18.0    0.58 
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGACTAG	TGGAACGAC	TCTTGTGT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGACTAGTGGAACGACTCTTGTGTACTGGTTCGACCCC	ARTSGTTLVYWFDP	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	242	3	3	0	0	100
Total	N/A	N/A	239	214	25	0	89.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  S  G  G  S  I  N  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  Q  L  E  
                    Query_3499   4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATCAATACCTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAACAACTGGAGT  93
V  89.5% (214/239)  IGHV4-59*08  50   .....TCC...A....CA.....................G..GT...................................GGG........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  S  Y  S  G  S  T  T  Y  S  P  S  L  K  S  R  V  T  M  S  I  D  T  S  K  N  
                    Query_3499   94   GGATTGGTTATATCTCTTACAGTGGGAGCACCACTTATAGCCCCTCCCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCCAAGAACC  183
V  89.5% (214/239)  IGHV4-59*08  140  .......G.......A.................AC..C.A...........................A...G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  T  S  G  T  T  L  V  Y  W  
                    Query_3499   184  AGTTCTCCCTGAGGCTGACGTCTGTGACCGCCGCAGACACGGCCATTTATTACTGTGCGCGGACTAGTGGAACGACTCTTGTGTACTGGT  273
V  89.5% (214/239)  IGHV4-59*08  230  ............A.....GC........................G.G............-------------------------------  288
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (9/9)     IGHD1-1*01   9    -------------------------------------------------------------------.........--------------  17
J  95.8% (46/48)    IGHJ5*02     4    ------------------------------------------------------------------------------------......  9

                                      ------->                                  
                                      F  D  P  W  G  Q  G  I  L  V  A  V  S  S  
                    Query_3499   274  TCGACCCCTGGGGCCAGGGAATCCTGGTCGCCGTCTCCTCAG  315
J  95.8% (46/48)    IGHJ5*02     10   .....................C.......A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_69030

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           347     7e-98
IGHD1-1*01                                                                                            12.2    32   
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGAGCAC	CAACTG	CCCGGGTCGG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGCACCAACTGCCCGGGTCGGCGGTATGGACGTC	ARDRAPTARVGGMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  D  M  N  W  V  R  Q  A  P  G  K  G  P  
                    Query_3500   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTAACTATGACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  94.4% (236/250)  IGHV3-21*01  47   ....................................C........G....AG...................................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  R  S  S  S  H  I  Y  N  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3500   91   AGTGGGTCTCATACATTAGTAGAAGTAGTAGTCACATATATAACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-21*01  137  ............C.........T.........T.......CT................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  A  P  T  A  R  
                    Query_3500   181  AGAATTCACTGTTTCTCCAAATGAACAACCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGAGCACCAACTGCCCGGG  270
V  94.4% (236/250)  IGHV3-21*01  227  ....C.......A...G..........G..........................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-1*01   5    ------------------------------------------------------------------------------......------  10

                                      ---------------->                                 
                                      V  G  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3500   271  TCGGCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  100.0% (46/46)   IGHJ6*02     17   ----..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_69031

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           413     2e-117
IGHD1-26*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCTTCT	TGGGAGCT	TTGTGTCGCCCCGAGGGCACGCCAATA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CTTCTTGGGAGCTTTGTGTCGCCCCGAGGGCACGCCAATAAC	LLGSFVSPRGHANN	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	282	113	109	4	0	96.5
Total	N/A	N/A	282	273	9	0	96.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  H
                    Query_3501   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCACCCA  90
V  96.8% (273/282)  IGHV5-51*03  6    ......................................................................................G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_3501   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGTTGGGAATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.8% (273/282)  IGHV5-51*03  96   ........G.....................................A....G......................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  G  H  V  T  I  S  A  D  T  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3501   181  GCCCTTCCAAGGCCACGTCACCATCTCAGCCGACACGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.8% (273/282)  IGHV5-51*03  186  .T.............G...................A........G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  L  L  G  S  F  V  S  P  R  G  H  A  N  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3501   271  CATGTATTACTGCCTTCTTGGGAGCTTTGTGTCGCCCCGAGGGCACGCCAATAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  96.8% (273/282)  IGHV5-51*03  276  ............-----------------------------------------------------------------------------  287
                                        M  Y  Y                                                                                
D  100.0% (8/8)     IGHD1-26*01  8    ------------------........---------------------------------------------------------------  15
J  100.0% (36/36)   IGHJ4*02     13   -----------------------------------------------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_237489

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           358     4e-101
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCACCCAA	TATGGTTCGGAGAGT	CTG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCACCCAATATGGTTCGGAGAGTCTG	ARATQYGSESL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	259	30	0	89.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  S  Y  T  F  T  S  Y 
                    Query_3502   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTAGTTACACCTTTACCTCCTAT  91
V  89.6% (259/289)  IGHV1-18*01  7    .................................................A...................G..............AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  S  W  V  R  Q  A  P  G  G  G  L  E  W  M  G  W  S  G  P  N  N  D  D  A  H  Y  G  H 
                    Query_3502   92   GGTGTCAGCTGGGTGCGCCAGGCCCCTGGAGGAGGGCTTGAATGGATGGGATGGAGCGGCCCTAACAATGATGACGCACACTATGGACAT  181
V  89.6% (259/289)  IGHV1-18*01  97   ...A.............A............CA.........G.............T.A..G..T......G.A..A..A......C...G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  L  R  G  R  V  T  I  T  T  D  T  S  T  T  T  S  F  M  E  L  R  S  L  R  S  A  D  T  A 
                    Query_3502   182  AGCCTCCGGGGCAGAGTCACCATTACCACAGACACATCAACGACCACATCCTTCATGGAGTTGAGGAGCCTGAGATCTGCCGACACGGCC  271
V  89.6% (259/289)  IGHV1-18*01  187  .AG....A...............G..............C....G....G...A.......C..................A..........  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  A  T  Q  Y  G  S  E  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3502   272  GTATATTACTGTGCGAGAGCCACCCAATATGGTTCGGAGAGTCTGTGGGGCCAGGGAACCCTGGTCACAGTCTCCTCAG  350
V  89.6% (259/289)  IGHV1-18*01  277  ..G................------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                              
D  93.3% (14/15)    IGHD3-10*01  8    ---------------------------..........G....-------------------------------------  22
J  97.1% (33/34)    IGHJ4*02     15   ---------------------------------------------.......................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_237488

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3503   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3503   91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*01  139  ........GT........T.......G...............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_3503   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.5% (234/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3503   271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_148541

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGTT	TGGATACAG	GTTAAGGGAATCAAACTTGAACCCCACCTC	CGGTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGTTTGGATACAGGTTAAGGGAATCAAACTTGAACCCCACCTCCGGTGTGGACGTC	AGFGYRLRESNLNPTSGVDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3504   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCCGGATTCACCTTCAGCACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.7% (227/245)  IGHV3-33*01  47   ............................T..............T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  F  D  G  S  N  E  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3504   91   AGTGGGTTGCACTTATCTGGTTTGATGGATCTAATGAAAAGTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.7% (227/245)  IGHV3-33*01  137  .......G...G....A....A.......AG....A..T.C.................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  G  F  G  Y  R  L  R  E  
                    Query_3504   181  AGAACACGTTGTATTTAGAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTCTATTACTGTGCGGGGTTTGGATACAGGTTAAGGGAAT  270
V  92.7% (227/245)  IGHV3-33*01  227  ........C.....C.GC..................C...............G............-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD5-18*01  2    ----------------------------------------------------------------------.........-----------  10

                                      R3-IMGT------------------------>                                 
                                      S  N  L  N  P  T  S  G  V  D  V  W  G  Q  G  T  T  V  T  I  S  S 
                    Query_3504   271  CAAACTTGAACCCCACCTCCGGTGTGGACGTCTGGGGCCAAGGGACCACGGTCACCATCTCCTCA  335
J  95.7% (44/46)    IGHJ6*02     17   -------------------....A................................G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_148540

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           294     6e-82
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTATTACGGTATGGACGTC	AREAYSYYGMDV	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	216	28	0	88.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  A  N  H  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_3505   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCGCTAATCACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  88.5% (216/244)  IGHV4-59*01  50   .....TCC...A....C.....................AG..G.T.........G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  I  S  H  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  T  A  D  K  S  K  N  
                    Query_3505   94   GGATTGCCTATATCTCTCACAGTGGGGGCACCAATTACAACCGCTCCCTCAAGAGTCGAGTCACCATAACAGCGGACAAGTCCAAGAACC  183
V  88.5% (216/244)  IGHV4-59*01  140  ......GG.......A.T........A.......C.......C.........................T...TA....C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D  
                    Query_3505   184  AGTTTTCCCTGAAGGTGAGATCTGTGACCGCCGCGGACACGGCCGTATATTATTGTGCCAGAGAGGCCTACTCTTATTACGGTATGGACG  273
V  88.5% (216/244)  IGHV4-59*01  230  ....C.........C....C...........T..............G.....C.....G.....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  91.4% (53/58)    IGHJ6*02     5    -------------------------------------------------------------------.....AC..C.............  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_3505   274  TCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  308
J  91.4% (53/58)    IGHJ6*02     28   ..........A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_148543

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD2-21*01                                                                                           12.2    33   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	T	GCATACTGT	AATATCATCAACTGCTCCCCGCGGGAAGGTG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATGCATACTGTAATATCATCAACTGCTCCCCGCGGGAAGGTGTTGACTTC	AKDAYCNIINCSPREGVDF	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  Y  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3506   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTTAGCTACTATGCCATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-23*01  47   ....................................CC......AG...........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  D  G  N  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_3506   91   AGTGGGTCTCAAGTATTAGTGGCAGTGATGGTAACACATATTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-23*01  137  ...........GC.........T....G.....G......C..............................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  M  Y  H  C  A  K  D  A  Y  C  N  I  I  
                    Query_3506   181  AGAACACGCTGTATCTGCAGATGAATAGCCTGAGAGTCGAGGACACGGCCATGTATCACTGTGCGAAGGATGCATACTGTAATATCATCA  270
V  92.0% (230/250)  IGHV3-23*01  227  ...................A.....C..........C.............G.A...T..........A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.9% (8/9)      IGHD2-21*01  2    -----------------------------------------------------------------------.....T...----------  10

                                      -IMGT----------------------->                                  
                                      N  C  S  P  R  E  G  V  D  F  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_3506   271  ACTGCTCCCCGCGGGAAGGTGTTGACTTCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  333
J  95.2% (40/42)    IGHJ4*02     7    ---------------------......A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_148542

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_3507   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_3507   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_3507   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_3507   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_148545

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           300     8e-84
IGHD3-9*01                                                                                            19.9    0.15 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ4*02	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTCGATTT	TTTTGACTGG	CCTAAATCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTCGATTTTTTTGACTGGCCTAAATCATTTTGACTAC	ARDFDFFDWPKSF*L	237	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	47	4	0	92.2
CDR2-IMGT	99	122	24	19	5	0	79.2
FR3-IMGT	123	236	114	105	9	0	92.1
CDR3-IMGT (germline)	237	244	8	7	1	0	87.5
Total	N/A	N/A	232	212	20	0	91.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  H  A  M  T  W  V  R  Q  A  S  G  R  G  L  E  W  V  S  T  I  
                    Query_3508   13   GTGCAGCCTCTGGATTCACCTTTAGCAGCCATGCCATGACCTGGGTCCGCCAGGCTTCAGGGAGGGGGCTGGAGTGGGTCTCAACTATTA  102
V  91.4% (212/232)  IGHV3-23*01  65   .............................T.........G................C......A...................G......  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  P  S  G  G  T  T  R  Y  S  D  S  V  K  G  R  F  T  I  S  K  D  N  S  K  N  T  V  Y  L  
                    Query_3508   103  ATCCTAGTGGTGGGACCACACGCTACTCGGACTCCGTGAAGGGCCGCTTCACCATCTCCAAAGACAATTCCAAGAACACGGTGTATCTGC  192
V  91.4% (212/232)  IGHV3-23*01  155  G.GG.........T.G....TA....G.A.................G.............G...................C.........  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><------------------CDR3-IMGT----------------->
                                      Q  M  T  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  D  F  F  D  W  P  K  S  F  *  L  
                    Query_3508   193  AGATGACCAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAGAGATTTCGATTTTTTTGACTGGCCTAAATCATTTTGACTAC  282
V  91.4% (212/232)  IGHV3-23*01  245  .A....A.........................................A...--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (10/10)   IGHD3-9*01   12   -------------------------------------------------------------..........-------------------  21
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------------------------------------------------------.........  14

                                                                        
                                      L  G  P  G  N  P  G  H  R  L  L   
                    Query_3508   283  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (43/43)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_194318

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD6-19*01                                                                                           12.2    30   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTGGC	GGCTGG	CTTAC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTGGCGGCTGGCTTACGGACGTC	TRGGGWLTDV	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3509   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTGGTTTCTACTGGAGCTGGATTCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   .............................T............A...A...............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  H  Y  S  G  H  T  N  Y  N  P  S  L  R  S  R  V  I  I  S  L  D  T  S  N  N 
                    Query_3509   91   TGGATTGGGAATATCCACTACAGTGGGCACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCATCATATCGCTGGACACGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  .........T.....T.T.........AG.......................A...........C......AG.A...........G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  I  S  L  K  V  N  S  G  T  A  A  D  T  A  L  Y  Y  C  T  R  G  G  G  W  L  T  D  V  W 
                    Query_3509   181  CAGATCTCCCTGAAGGTGAACTCTGGGACCGCTGCGGACACGGCCCTCTATTATTGTACGAGAGGTGGCGGCTGGCTTACGGACGTCTGG  270
V  90.6% (221/244)  IGHV4-59*01  229  ...T...........C...G.....T...................G.G.....C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  13   ---------------------------------------------------------------------......---------------  18
J  100.0% (40/40)   IGHJ6*02     23   --------------------------------------------------------------------------------..........  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_3509   271  GGCCAAGGGACCACGGTCACCGTCTCCTCA  300
J  100.0% (40/40)   IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_148547

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           330     1e-92
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGACA	ATTCGAT	TATTATGA	GGGTTCTTCTTACCCAAGACACTTT	GACCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACAATTCGATTATTATGAGGGTTCTTCTTACCCAAGACACTTTGACCCC	ARQFDYYEGSSYPRHFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  G  F  F  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_3510   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTGGTTTTTTCTGGAGTTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*08  49   ....................................A.....A...AC.A......C......................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  L  V  D  T  S  K  N 
                    Query_3510   91   TGGATTGGGTATATCTTTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTTAGTAGACACGTCCAAGAAT  180
V  93.1% (228/245)  IGHV4-59*08  139  ................A...................................................A.C..................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  R  S  M  T  A  S  D  T  A  V  Y  Y  C  A  R  Q  F  D  Y  Y  E  G  S  S 
                    Query_3510   181  CAGTTCTCCCTGAGGCTGAGGTCTATGACCGCCTCAGACACGGCCGTATATTACTGTGCGCGACAATTCGATTATTATGAGGGTTCTTCT  270
V  93.1% (228/245)  IGHV4-59*08  229  .............A......C...G........G.............G............A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-16*01  2    ------------------------------------------------------------------------........----------  9

                                      -------------------->                                  
                                       Y  P  R  H  F  D  P  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_3510   271  TACCCAAGACACTTTGACCCCTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  325
J  97.5% (39/40)    IGHJ5*02     12   ---------------...........................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_148546

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGATGGA	ATTACTAT	CAAACGAAGCA	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCGATGGAATTACTATCAAACGAAGCAATGGTTTTGATATA	TRGDGITIKRSNGFDI	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_3511   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGGCTTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  94.7% (233/246)  IGHV3-53*01  47   ................................................A.......AGC......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_3511   91   AGTGGGTCTCAGTTATTTACAGCGGTGGTACCACATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.7% (233/246)  IGHV3-53*01  137  ...................T..........G........A..................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  L  Y  Y  C  T  R  G  D  G  I  T  I  K  R  
                    Query_3511   181  ACACGCTGTATCTTCAAATGCACAGCCTGAGAGCCGACGACACGGCCCTGTACTACTGTACGAGAGGCGATGGAATTACTATCAAACGAA  270
V  94.7% (233/246)  IGHV3-53*01  227  ....................A................G.........G....T......G......------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  3    --------------------------------------------------------------------------........--------  10

                                      ---------------->                                  
                                      S  N  G  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3511   271  GCAATGGTTTTGATATATGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  321
J  93.8% (45/48)    IGHJ3*02     3    ---...C.........C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_148549

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           364     5e-103
IGHD2-15*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGC	ATTGTAATGGT	AACAGGTGTTGGGG	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGCATTGTAATGGTAACAGGTGTTGGGGCGTC	ARDRHCNGNRCWGV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3512   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAACAACTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (240/247)  IGHV3-53*01  47   .............................................G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  I  Y  S  G  G  T  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  
                    Query_3512   91   AGTGGGTCTCACTTATTTATAGCGGTGGTACCACACACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGA  180
V  97.2% (240/247)  IGHV3-53*01  137  ...........G..................G....T...................................................A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  R  H  C  N  G  N  R  
                    Query_3512   181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGATAGGCATTGTAATGGTAACAGGT  270
V  97.2% (240/247)  IGHV3-53*01  227  .................................C.................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  90.9% (10/11)    IGHD2-15*01  6    ------------------------------------------------------------------------......G....-------  16

                                      ---------->                                 
                                      C  W  G  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3512   271  GTTGGGGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (37/37)   IGHJ6*02     26   -------.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_148548

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     3e-93
IGHD2-15*01                                                                                           10.3    117  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	C	GGTGG	CCGGGGGGGGGTCGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACGGTGGCCGGGGGGGGGTCGGCCTTTGACTAC	AKDGGRGGVGL*L	239	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	23	1	0	95.8
FR3-IMGT	125	238	114	107	7	0	93.9
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	232	222	10	0	95.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  
                    Query_3513   15   GTGCAGCCTCTGGATTCACCTTCAGCAGCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTA  104
V  95.7% (222/232)  IGHV3-23*01  65   ......................T.................C.................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  G  N  T  Y  Y  P  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_3513   105  GTGGTAGTGGTGGTAACACATACTACCCAGACTCCGTGAAGGGCCGGTTTACCATCTCCAGAGACAATTCCAAGAACACGCTTTATCTCC  194
V  95.7% (222/232)  IGHV3-23*01  155  ...............G..........G......................C................................G.....G.  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><---------------CDR3-IMGT-------------->      
                                      Q  M  N  T  L  R  V  E  D  T  A  V  Y  Y  C  A  K  D  G  G  R  G  G  V  G  L  *  L  L  G  
                    Query_3513   195  AAATGAACACACTGAGAGTCGAGGACACGGCCGTATATTACTGTGCGAAAGACGGTGGCCGGGGGGGGGTCGGCCTTTGACTACTGGGGC  284
V  95.7% (222/232)  IGHV3-23*01  245  .........GC.......C.................................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (5/5)     IGHD2-15*01  14   -----------------------------------------------------.....--------------------------------  18
J  93.2% (41/44)    IGHJ4*02     5    --------------------------------------------------------------------------................  20

                                                                  
                                      P  G  N  P  D  Q  C  L  L   
                    Query_3513   285  CAGGGAACCCTGATCAGTGTCTCCTCAG  312
J  93.2% (41/44)    IGHJ4*02     21   ............G...CC..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_194317

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD7-27*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCA	AACTGGG	AACTCAATAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGACGTCAAACTGGGAACTCAATATACAACTGGTTCGACCCC	SRRQTGNSIYNWFDP	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_3514   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  95.5% (231/242)  IGHV4-59*01  50   .....TCC...A....C.....................................G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_3514   94   GGATTGGATATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  95.5% (231/242)  IGHV4-59*01  140  .......G..................................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  R  L  S  S  V  T  A  V  D  T  A  V  Y  Y  C  S  R  R  Q  T  G  N  S  I  Y  N  
                    Query_3514   184  AGTTCTCCCTGAGACTGAGCTCTGTGACCGCTGTGGACACGGCCGTGTATTACTGTTCGAGACGTCAAACTGGGAACTCAATATACAACT  273
V  95.5% (231/242)  IGHV4-59*01  230  ............AG...................C......................G.....----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (7/7)     IGHD7-27*01  3    -------------------------------------------------------------------.......----------------  9
J  98.0% (50/51)    IGHJ5*02     1    ------------------------------------------------------------------------------------......  6

                                      ---------->                                  
                                      W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_3514   274  GGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  318
J  98.0% (50/51)    IGHJ5*02     7    .......................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_194316

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           296     2e-82
IGHD6-6*01                                                                                            12.2    33   
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD6-6*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGG	GCTCGT	TGTGATAATTCCATCTGCCCGAAAAACTTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTCGTTGTGATAATTCCATCTGCCCGAAAAACTTGCTGGTTCGACCCC	ARGLVVIIPSARKTCWFDP	246	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	22	8	0	73.3
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	104	10	0	91.2
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	218	29	0	88.3


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  D  I  S  I  N  T  G  D  Y  Y  W  S  W  F  R  Q  S  P  Q  K  G  
                    Query_3515   4    CCCTGAGACTCTCCTGTACTGTCTCTGATATCTCCATCAACACCGGTGATTACTATTGGAGCTGGTTCCGCCAGTCCCCACAGAAGGGCC  93
V  88.3% (218/247)  IGHV4-31*02  50   .....TCC...A...............G.GG........G..GT....G......C.........A........CA....GG........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  G  T  F  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S  
                    Query_3515   94   TGGAATGGATTGGGTACATCTATTACAGTGGGGGCACCTTCTACAACCCGTCCCTCAGGAGTCGTGTTAGCATTTCCATAGACACGTCTA  183
V  88.3% (218/247)  IGHV4-31*02  140  ....G...........................A......A.................A......A....C...A..AG............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  V  V  I  I  P  
                    Query_3515   184  AGAACCAGTTCTCCCTGAAGGTGAACTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGGGGGCTCGTTGTGATAATTCCAT  273
V  88.3% (218/247)  IGHV4-31*02  230  ....................C...G...........................G..............-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD6-6*01   11   ----------------------------------------------------------------------......--------------  16

                                      -IMGT----------------------->                                  
                                      S  A  R  K  T  C  W  F  D  P  W  G  P  G  T  L  V  S  V  S  S  
                    Query_3515   274  CTGCCCGAAAAACTTGCTGGTTCGACCCCTGGGGCCCGGGAACCCTGGTCAGCGTCTCCTCAG  336
J  95.7% (45/47)    IGHJ5*02     5    ----------------....................A..............C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_194311

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            397     8e-113
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_3516  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.8% (272/290)  IGHV1-8*02  6    ..................G..........................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_3516  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.8% (272/290)  IGHV1-8*02  96   ........A.........................................................C.......................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  I  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_3516  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATAAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.8% (272/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T.......................C..........G.GAT....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3516  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.8% (272/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_194313

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           386     1e-109
IGHD1-26*01                                                                                           12.2    31    
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATAT	GTGGGA	AGGTCCA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATATGTGGGAAGGTCCAACTTTGACTAC	AREYVGRSNFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	249	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_3517   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  99.2% (249/251)  IGHV4-61*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  Y  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3517   91   CTGGAGTGGATTGGGTATATCTATTACAGTGGGTACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  99.2% (249/251)  IGHV4-61*01  139  .................................AG.......................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  Y  V  G  R  S  N 
                    Query_3517   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAATATGTGGGAAGGTCCAAC  270
V  99.2% (249/251)  IGHV4-61*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-26*01  7    ---------------------------------------------------------------------------......---------  12
J  100.0% (45/45)   IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3517   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (45/45)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_63875

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           391     5e-111
IGHD2-2*01                                                                                            27.6    8e-04 
IGHJ6*02                                                                                              112     6e-29 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TT	TACCAGCTGCTATG	TC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTACCAGCTGCTATGTCCTACTACTACTACGGTATGGACGTC	ARDLPAAMSYYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	250	0	0	100


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                     Query_3518   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  100.0% (250/250)  IGHV3-64*01  47   ..........................................................................................  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  
                     Query_3518   91   AATATGTTTCAGCTATTAGTAGTAATGGGGGTAGCACATATTATGCAAACTCTGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  100.0% (250/250)  IGHV3-64*01  137  ..........................................................................................  226
                                       E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                       K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R  D  L  P  A  A  M  S  
                     Query_3518   181  AGAACACGCTGTATCTTCAAATGGGCAGCCTGAGAGCTGAGGACATGGCTGTGTATTACTGTGCGAGAGATTTACCAGCTGCTATGTCCT  270
V  100.0% (250/250)  IGHV3-64*01  227  ......................................................................--------------------  296
                                       K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)    IGHD2-2*01   16   ------------------------------------------------------------------------..............----  29
J  100.0% (58/58)    IGHJ6*02     5    ----------------------------------------------------------------------------------------..  6

                                       GT-------------------->                                 
                                       Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                     Query_3518   271  ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (58/58)    IGHJ6*02     7    ........................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_297632

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD2-2*01                                                                                            41.1    7e-08
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGCGCGAG	ATTGTAGTAGTACCAGCTGCT	TTGGAACTGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCGCGAGATTGTAGTAGTACCAGCTGCTTTGGAACTGGTGCTTTTGATATC	ARGARDCSSTSCFGTGAFDI	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_3519   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGACCCCAGGGAAGGGACTGGAG  90
V  93.9% (229/244)  IGHV4-59*01  49   ........................................G............................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  S  Y  Y  N  G  I  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  M  N 
                    Query_3519   91   TGGATCGGCTATTCTTATTATAATGGGATCACCAACTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCATGAAC  180
V  93.9% (229/244)  IGHV4-59*01  139  .....T..G...ATC.....C.G.....G.......................A................................A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  R  D  C  S  S  T  S 
                    Query_3519   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGGGGCGCGAGATTGTAGTAGTACCAGC  270
V  93.9% (229/244)  IGHV4-59*01  229  .............................C..T..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (21/21)   IGHD2-2*01   6    -------------------------------------------------------------------------.................  22

                                      GT------------------------>                                  
                                       C  F  G  T  G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3519   271  TGCTTTGGAACTGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  331
D  100.0% (21/21)   IGHD2-2*01   23   ....---------------------------------------------------------  26
J  100.0% (47/47)   IGHJ3*02     4    --------------...............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_685

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGTCCCGACTGAACTACGGCATGGACGTC	ARLMSRLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  S  N  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_3520   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATCAGCAATTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G.........T.G................A............................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3520   91   TGGATTGAGTACATCTATTACAGGGGGAGTCCCAATAACGACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G...T...........T.....CA....CT..A..................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_3520   181  CAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTAATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  .............A.C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  96.0% (48/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3520   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  309
J  96.0% (48/50)    IGHJ6*02     24   ...................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_297630

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           330     1e-92
IGHD1-26*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGAGGGC	GGGAGCT	C	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGAGGGCGGGAGCTCGACTAC	ARGGGRELDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  H  W  M  H  W  V  R  Q  V  P  G  K  G  P  
                    Query_3521   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTCAGTAGCCACTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGGCCGG  90
V  92.4% (230/249)  IGHV3-74*01  47   .....................C.........................T........................C..............T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  H  I  N  V  D  G  R  I  T  R  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3521   91   TGTGGGTCTCACATATCAATGTTGATGGGAGAATCACAAGATACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (230/249)  IGHV3-74*01  137  ............G...T...AG.........T.G......C.................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  V  N  S  L  R  V  E  D  M  G  V  Y  Y  C  A  R  G  G  G  R  E  L  D  
                    Query_3521   181  AGAACACACTTTATTTGCAAGTGAACAGTCTGAGAGTCGAGGACATGGGTGTGTATTACTGTGCGAGAGGAGGAGGGCGGGAGCTCGACT  270
V  92.4% (230/249)  IGHV3-74*01  227  .......G..G...C.....A...............C........C..C...............A....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  9    ------------------------------------------------------------------------------.......-----  15
J  100.0% (40/40)   IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3521   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (40/40)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_297631

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           347     7e-98
IGHD2-15*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGTTGACTGT	TGGCAGCTGC	CTCCTT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGTTGACTGTTGGCAGCTGCCTCCTTGACCTC	ARDRLTVGSCLLDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3522   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACATTTAGTAGTCATGAAATGAACTGGGTCCGACAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-48*03  47   .....................................C..C......T...................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  G  G  Y  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3522   91   AGTGGGTTTCATACATTAGTAGTGGTGGTTATACTATCTACTACGCAGACTCTGTGAAGGGCCGATTCACTATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-48*03  137  .......................A.....AG...C..A................................C...................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  F  L  Q  M  S  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  R  L  T  V  G  S  
                    Query_3522   181  AGAACTCATTGTTTCTGCAAATGAGCAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGAGATCGGTTGACTGTTGGCAGCT  270
V  94.4% (236/250)  IGHV3-48*03  227  ........C...A...........A...........C.................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD2-15*01  16   ----------------------------------------------------------------------------------...T....  23

                                      ------------->                                  
                                      C  L  L  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3522   271  GCCTCCTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  90.0% (9/10)     IGHD2-15*01  24   ..----------------------------------------------  25
J  97.5% (39/40)    IGHJ5*02     12   --------....C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_238338

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD6-13*01                                                                                           18.0    0.55  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CACG	AGCAGCTGG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACACGAGCAGCTGGATTGACTAC	ARDTSSWIDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3523   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ...............................G...........G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  T  G  S  T  N  Y  N  P  S  L  K  S  Q  F  T  I  S  V  D  T  S  K  N 
                    Query_3523   91   TGGATTGGGTATATCTTTTACACTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCAATTCACCATATCAGTAGACACGTCGAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  ................A.....G...................................G.G......................C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  S  S  W  I  D  Y  W 
                    Query_3523   181  CAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACACGAGCAGCTGGATTGACTACTGG  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-13*01  10   ---------------------------------------------------------------------.........------------  18
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------...........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_3523   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (42/42)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_238339

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           291     5e-81
IGHD1-26*01                                                                                           10.3    116  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTTGT	ACA	GGAGC	ATCAGGTGAGGGG	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGGTGAGGGGTGGCTCGACCCC	TGASGEGWLDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	97	17	0	85.1
Total	N/A	N/A	242	214	28	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  L  S  D  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3524   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCATGTTGAGCGATTATGGAATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  88.4% (214/242)  IGHV3-33*03  47   ....................................CC..C..TAGC.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  K  K  F  Y  A  E  S  V  K  G  R  F  T  I  F  R  E  D  T  
                    Query_3524   91   AGTGGGTGGCAGTTATCTGGTATGATGGAATTAAGAAATTCTATGCAGAGTCCGTGAAGGGCCGATTCACCATCTTCAGAGAAGACACCA  180
V  88.4% (214/242)  IGHV3-33*03  137  ................A.............G...T....A.........C.........................C......CA..T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      S  N  T  L  F  L  Q  M  D  G  L  R  A  E  D  T  A  L  Y  F  C  T  G  A  S  G  E  G  W  L  
                    Query_3524   181  GCAACACCCTGTTTCTGCAGATGGACGGCCTGAGAGCCGAGGACACGGCTCTTTATTTTTGTACAGGAGCATCAGGTGAGGGGTGGCTCG  270
V  88.4% (214/242)  IGHV3-33*03  227  AG.....G....A......A...A..A.......................G.G....AC...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (5/5)     IGHD1-26*01  10   -----------------------------------------------------------------.....--------------------  14
J  93.5% (43/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------...T...  12

                                      ---->                                  
                                      D  P  W  G  Q  G  A  Q  V  T  V  S  S  
                    Query_3524   271  ACCCCTGGGGCCAGGGAGCCCAGGTCACCGTCTCCTCAG  309
J  93.5% (43/46)    IGHJ5*02     13   .................A...T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_297634

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           372     2e-105
IGHD6-13*01                                                                                           14.1    7.9   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGA	ATAGCAG	GAATC	TTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGAATAGCAGGAATCTTGAATTC	AKNSRNLEF	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	242	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  P  P  G  K  G  L  
                    Query_3525   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  98.4% (242/246)  IGHV3-48*03  47   .......................................................................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  F  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_3525   91   AGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATTCTACGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  98.4% (242/246)  IGHV3-48*03  137  .......................................A...............................A..................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  N  S  R  N  L  E  F  
                    Query_3525   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAAGAATAGCAGGAATCTTGAATTCT  270
V  98.4% (242/246)  IGHV3-48*03  227  ............A.....................................................------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD6-13*01  5    ---------------------------------------------------------------------.......--------------  11
J  95.2% (40/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------....C.A..  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3525   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  95.2% (40/42)    IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_238335

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     2e-95
IGHD3-10*01                                                                                           10.3    117  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_3526   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-21*01  47   ............................................AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  E  Y  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_3526   91   AGTGGGTCTCATCCATTAGTAGTACTAGTGAATACATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  93.6% (233/249)  IGHV3-21*01  137  ........................G....AGT........C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_3526   181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTT  270
V  93.6% (233/249)  IGHV3-21*01  227  ............A......A..............................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3526   271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_238336

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*01                                                                                           329     3e-92
IGHD2-21*02                                                                                           14.1    8.4  
IGHJ6*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGGG	GACTTCTATT	GCTTCTTCTGCCCAT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAAGGGGACTTCTATTGCTTCTTCTGCCCATTGGACCTC	AREGDFYCFFCPLDL	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  T  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3527   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCATGAACTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-48*01  47   ................................T.......C.GT.G....AG.....................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  S  S  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3527   91   AGTGGGTCTCATCCATTAGTGGTAGTAGTAGTACCACATACTACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  92.0% (230/250)  IGHV3-48*01  137  .......T....A.......A...............T...........................A.........................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  G  D  F  Y  C  F  
                    Query_3527   181  AGAACTCCCTGTATCTGCAAATGAATAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAGAGAAGGGGACTTCTATTGCTTCT  270
V  92.0% (230/250)  IGHV3-48*01  227  .......A.................C..C........C...........TG.............G.....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD2-21*02  17   --------------------------------------------------------------------------....G.....------  26

                                      ---------------->                                 
                                      F  C  P  L  D  L  W  G  Q  G  P  T  V  S  V  P  S 
                    Query_3527   271  TCTGCCCATTGGACCTCTGGGGCCAAGGCCCCACGGTCTCCGTCCCCTCA  320
J  87.8% (36/41)    IGHJ6*02     22   ---------.....G.............GA........A.....T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_238337

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           357     1e-100
IGHD3-3*01                                                                                            21.8    0.045 
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGCCGAAATC	GTATTACGACTTCTGGA	ATCCTTATTCTCGGCTCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCGAAATCGTATTACGACTTCTGGAATCCTTATTCTCGGCTCCTTCGACCCC	ARGGRNRITTSGILILGSFDP	261	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	20	4	0	83.3
FR2-IMGT	75	125	51	47	4	0	92.2
CDR2-IMGT	126	146	21	20	1	0	95.2
FR3-IMGT	147	260	114	106	8	0	93
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	248	20	0	92.5


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  V  T  C  A  V  Y  G  G  S  F  S  D  H  Y  W  S  W  I  R  
                    Query_3528   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCGTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGATCATTATTGGAGCTGGATCCGCC  90
V  92.5% (248/268)  IGHV4-34*01  26   ........T.......T...............C.................................G.T.C..C................  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  S  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_3528   91   AGTCTCCAGGGAAGGGGCTGGAATGGATTGGGGAGATCAACCATAGTGGAAGCACCAACTACAACCCGTCTCTCAAGAGTCGAGTCACCA  180
V  92.5% (248/268)  IGHV4-34*01  116  ..C.C.................G...........A.....T.............................C...................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  A  D  T  S  K  N  Q  F  S  L  K  L  I  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  
                    Query_3528   181  TATCAGCGGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGATCTCTGTGACCGCCGCAGACACGGCTGTATATTTCTGTGCGAGAGGGG  270
V  92.5% (248/268)  IGHV4-34*01  206  ......TA........C.........................G...............G...........G....A............--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  

                                      -----------------CDR3-IMGT-------------------------->                                  
                                      G  R  N  R  I  T  T  S  G  I  L  I  L  G  S  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_3528   271  GCCGAAATCGTATTACGACTTCTGGAATCCTTATTCTCGGCTCCTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  357
D  88.2% (15/17)    IGHD3-3*01   1    ---------.........T..T....-------------------------------------------------------------  17
J  97.7% (42/43)    IGHJ5*02     9    --------------------------------------------.........................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_238330

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD3-16*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	G	GGGGGAG	ACAAGTTCAGAAGAGAATAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGGGGGGAGACAAGTTCAGAAGAGAATATTACTTTAACTAC	VRGGDKFRREYYFNY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	244	5	4	1	0	80
Total	N/A	N/A	241	221	20	0	91.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  D  S  M  T  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_3529   4    CCCTGAGACTCTCCTGTTCTGTCTCTGGTGACTCCATGACTGATTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  91.7% (221/241)  IGHV4-59*01  50   .....TCC...A....CA............G......C.G.AG............C..................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_3529   94   GGATTGGATATATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAACC  183
V  91.7% (221/241)  IGHV4-59*01  140  .......G...................G.............................................A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  S  S  V  I  A  A  D  T  A  V  Y  Y  C  V  R  G  G  D  K  F  R  R  E  Y  
                    Query_3529   184  AGTTCTCCCTGAAACTGAGTTCTGTGATCGCTGCGGACACGGCCGTCTATTACTGTGTGAGGGGGGGAGACAAGTTCAGAAGAGAATATT  273
V  91.7% (221/241)  IGHV4-59*01  230  .............G.....C.......C..................G..........C...-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (7/7)     IGHD3-16*01  18   --------------------------------------------------------------.......---------------------  24
J  93.5% (43/46)    IGHJ4*02     3    -----------------------------------------------------------------------------------------.  3

                                      ---------->                                  
                                      Y  F  N  Y  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_3529   274  ACTTTAACTACTGGGGCCAGGGCACCCCGGTCACCGTCTCCTCAG  318
J  93.5% (43/46)    IGHJ4*02     4    .....G................A....T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_238332

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         433     1e-123
IGHD6-6*01                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CACAATTCCTC	TATAGCAGCTCGTCC	CCAATTAGCG	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACAATTCCTCTATAGCAGCTCGTCCCCAATTAGCGACTCCTACTACTACAATATGGACGTC	ATQFLYSSSSPISDSYYYNMDV	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	282	5	0	98.3


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_3530     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  98.3% (282/287)  IGHV5-10-1*01  6    .............................................................................G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  G  W  M  G  R  I  D  P  S  D  S  Y  T  D  Y  S  P
                    Query_3530     91   CTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGGGTGGATGGGGAGAATTGATCCTAGTGACTCTTATACCGACTACAGCCC  180
V  98.3% (282/287)  IGHV5-10-1*01  96   .........................................A............G........................A..........  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3530     181  GTCCTTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCATCAGCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (282/287)  IGHV5-10-1*01  186  ..........................................................................................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------------------CDR3-IMGT--------------------------->           
                                          M  Y  Y  C  A  T  Q  F  L  Y  S  S  S  S  P  I  S  D  S  Y  Y  Y  N  M  D  V  W  G  Q  G
                    Query_3530     271  CATGTATTACTGTGCGACACAATTCCTCTATAGCAGCTCGTCCCCAATTAGCGACTCCTACTACTACAATATGGACGTCTGGGGCCAAGG  360
V  98.3% (282/287)  IGHV5-10-1*01  276  .................-------------------------------------------------------------------------  292
                                          M  Y  Y  C  A                                                                           
D  100.0% (15/15)   IGHD6-6*01     4    ----------------------------...............-----------------------------------------------  18
J  94.9% (56/59)    IGHJ6*02       4    -----------------------------------------------------...A..........GG.....................  40

                                                              
                                          T  T  V  T  V  S  S 
                    Query_3530     361  GACCACGGTCACCGTCTCCTCA  382
J  94.9% (56/59)    IGHJ6*02       41   ......................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_238333

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         288     5e-80
IGHD3-22*01                                                                                           14.1    8.4  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCATATGCCTACGAAGACAGAAA	TTATTAC	N/A	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATTCATATGCCTACGAAGACAGAAATTATTACTTCGACCCC	ARDSYAYEDRNYYFDP	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	12	9	0	57.1
FR3-IMGT	127	240	114	98	16	0	86
CDR3-IMGT (germline)	241	248	8	7	1	0	87.5
Total	N/A	N/A	248	216	32	0	87.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  S  V  S  G  Y  S  I  N  S  G  Y  Y  W  A  W  I  R  Q  S  P  G  K  G  L 
                    Query_3531     1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTTACTCCATAAACAGTGGTTACTACTGGGCCTGGATCCGCCAGTCCCCAGGGAAGGGGCTG  90
V  87.1% (216/248)  IGHV4-38-2*02  49   ..................A...................C.G.................G.........G...C.................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  V  Y  R  T  G  N  M  Y  Y  S  P  S  F  E  S  R  V  T  L  L  V  D  K  A  K 
                    Query_3531     91   GAGTGGATTGGGAGTGTCTATCGTACCGGTAATATGTACTACAGTCCGTCCTTCGAGAGTCGAGTCACTCTATTAGTAGACAAGGCGAAG  180
V  87.1% (216/248)  IGHV4-38-2*02  139  ...............A......A..GT..G.GC.CC.......AC......C..A.............CA...C........C.T.C...  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                         N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  Y  A  Y  E  D  R 
                    Query_3531     181  AACCAGTTCTCGTTGAGGTTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGCGAGATTCATATGCCTACGAAGACAGA  270
V  87.1% (216/248)  IGHV4-38-2*02  229  ...........CC...A.C...G.................................C......A....----------------------  296
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         

                                        ----------------->                                  
                                         N  Y  Y  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3531     271  AATTATTACTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (7/7)     IGHD3-22*01    22   --.......-------------------------------------------  28
J  100.0% (43/43)   IGHJ5*02       9    ---------...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_63878

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     1e-124
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_3532   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  98.3% (284/289)  IGHV5-51*01  6    .............................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_3532   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3532   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3532   271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_3532   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_292739

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           372     2e-105
IGHD5-18*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGA	GATACAGCTATGGTT	CCCAC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATGGAGATACAGCTATGGTTCCCACCTTTGACTGC	ARDGDTAMVPTFDC	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3533   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  97.6% (244/250)  IGHV3-74*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  I  S  H  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  A  
                    Query_3533   91   TGTGGATCTCACATATTAATAGTGATGGGAGTAGCACAAGCTACGCGGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAGACAACGCCA  180
V  97.6% (244/250)  IGHV3-74*01  137  .....G......G........................................................C....................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  V  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  D  T  A  M  V  
                    Query_3533   181  AGAACACACTGTATCTGCAAGTGAACAATCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGATGGAGATACAGCTATGGTTC  270
V  97.6% (244/250)  IGHV3-74*01  227  .......G............A......G..........................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD5-18*01  4    --------------------------------------------------------------------------...............-  18

                                      ------------->                                  
                                      P  T  F  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3533   271  CCACCTTTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (43/44)    IGHJ4*02     5    ----........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_230109

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           325     2e-91
IGHD3-3*01                                                                                            35.3    3e-06
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACGATTTTTGGAGTGGTT	GAGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACGATTTTTGGAGTGGTTGAGCATGGACGTG	ARGRFLEWLSMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	23	4	0	85.2
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  N  G  G  S  I  N  T  Y  F  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_3534   1    ACCCTGTCCCTCACCTGCAGTGTCAACGGTGGCTCCATCAATACTTACTTCTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.6% (226/244)  IGHV4-59*01  49   ...................C....TCT.............G..G.....A...................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  S  Y  N  P  S  L  T  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3534   91   TGGATTGGCTATATCTACTACAGTGGGACCACCAGTTACAATCCCTCCCTCACGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  92.6% (226/244)  IGHV4-59*01  139  ........G........T..........G.....AC.....C..........A.....................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  F  L  E  W  L  S  M 
                    Query_3534   181  CAGTTTTCCCTGAAGCTGACCTCTGCGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGACGATTTTTGGAGTGGTTGAGCATG  270
V  92.6% (226/244)  IGHV4-59*01  229  .....C.............G.....T......................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (18/18)   IGHD3-3*01   6    -----------------------------------------------------------------..................-------  23
J  92.9% (39/42)    IGHJ6*02     21   ---------------------------------------------------------------------------------------...  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_3534   271  GACGTGTGGGGCCAAGGGACCACAGTCATCGTCTCCTCA  309
J  92.9% (39/42)    IGHJ6*02     24   .....C.................G....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_230108

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	68	6	0	91.9
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	109	5	0	95.6
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	295	277	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  P  L  R  I  S  C  K  G  S  G  Y  S  F  S  
                    Query_3535   5    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGCCTCTGAGGATTTCCTGTAAGGGGTCTGGATACAGCTTTTCCA  94
V  93.9% (277/295)  IGHV5-51*01  2    ..................................A........G...T......A...C...........T...............A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  
                    Query_3535   95   CTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACA  184
V  93.9% (277/295)  IGHV5-51*01  92   GC..C.......G.................................................T.................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  
                    Query_3535   185  ACCCGTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACA  274
V  93.9% (277/295)  IGHV5-51*01  182  G..........C.....................C...........................................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  
                    Query_3535   275  CCGCCATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  364
V  93.9% (277/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  85.7% (12/14)    IGHD1-26*01  4    ---------------------------------...G....A.....-------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------------......TA................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_3535   365  CGGTCACCGTCTCGTCA  381
J  94.7% (54/57)    IGHJ6*02     46   .............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_230107

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           352     3e-99
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TAGGG	AGCAGTGGCTGGTAC	GGGATAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTAGGGAGCAGTGGCTGGTACGGGATAGACTACTTTGAATAC	ARVGSSGWYGIDYFEY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  I  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3536   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCATCAGTAGTTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-74*01  47   ....................................C.T.......C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  D  D  G  S  F  R  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  H  A  
                    Query_3536   91   TGTGGGTCTCACGTATTAATGATGATGGGAGTTTCAGAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACCACGCCA  180
V  95.2% (237/249)  IGHV3-74*01  137  ....................AG..........AG..C..............................................A......  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  M  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  S  S  G  W  Y  
                    Query_3536   181  AGAACATGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTATATTATTGTGCAAGAGTAGGGAGCAGTGGCTGGTACG  270
V  95.2% (237/249)  IGHV3-74*01  227  ......C.............................................G.....C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD6-19*01  7    --------------------------------------------------------------------------...............-  21

                                      T------------------>                                  
                                      G  I  D  Y  F  E  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_3536   271  GGATAGACTACTTTGAATACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  324
J  95.8% (46/48)    IGHJ4*02     1    ------..........C...............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_230106

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD6-25*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAGG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTC	ARQSSAGRTRYGMDV	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	295	277	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  
                    Query_3537   4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATTCGACTTTACCG  93
V  93.9% (277/295)  IGHV5-51*01  2    ..G.....................................C.............................T.......A.AG.......A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  V  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  P  D  T  R  Y  
                    Query_3537   94   ACTACTGGATCGTCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACCCTGATACGAGATACA  183
V  93.9% (277/295)  IGHV5-51*01  92   G...........G..............T..............................................T.......C.......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  G  L  K  A  S  D  
                    Query_3537   184  GTCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACA  273
V  93.9% (277/295)  IGHV5-51*01  182  .C...............................C.............A.......................A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  F  C  A  R  Q  S  S  A  G  R  T  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_3537   274  CCGCCATGTATTTTTGTGCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCT  363
V  93.9% (277/295)  IGHV5-51*01  272  ............AC...........-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD6-25*01  7    --------------------------.......---------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -----------------------------------------------...........................................  57

                                           
                                      S  S 
                    Query_3537   364  CGTCA  368
J  97.9% (47/48)    IGHJ6*02     58   .C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_230105

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           327     9e-92
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTCCCCTTCGATTC	TATTACTATGATGGCAGTTTTTATT	TCGTCGGGGGGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTCCCCTTCGATTCTATTACTATGATGGCAGTTTTTATTTCGTCGGGGGGGCCTTTGACTAC	AKVPLRFYYYDGSFYFVGGAFDY	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  F  S  S  F  A  M  N  W  V  R  Q  A  P  G  Q  G  L  
                    Query_3538   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCATTTTTAGTAGCTTTGCCATGAACTGGGTCCGCCAGGCTCCAGGGCAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-23*01  47   ....................G...............CC.....C....A........G......................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  T  T  Q  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3538   91   AATGGGTCTCAAGTATTAGTGGTAGTGGTGCTACCACACAGTACGCGGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.0% (229/249)  IGHV3-23*01  137  .G.........GC.................G..G....T.C.....A...........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  V  P  L  R  F  Y  Y  
                    Query_3538   181  AGAATTCCCTGTATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGTTCCCCTTCGATTCTATTACT  270
V  92.0% (229/249)  IGHV3-23*01  227  ....CA.G...............A..........................G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  84.0% (21/25)    IGHD3-22*01  2    -----------------------------------------------------------------------------------.......  8

                                      --CDR3-IMGT----------------------------->                                  
                                      Y  D  G  S  F  Y  F  V  G  G  A  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_3538   271  ATGATGGCAGTTTTTATTTCGTCGGGGGGGCCTTTGACTACTGGGGCCAGGGAACCCTGGTCAGCGTCTCCTCAG  345
D  84.0% (21/25)    IGHD3-22*01  9    .....A.T...GG.....---------------------------------------------------------  26
J  97.7% (43/44)    IGHJ4*02     5    -------------------------------................................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_230102

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            311     4e-87
IGHD3-10*01                                                                                           10.3    114  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GA	TCGGG	ATGGCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGATCGGGATGGCTCCCTGACTAC	VGGSGWLPDY	239	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	21	3	0	87.5
FR3-IMGT	125	238	114	107	7	0	93.9
CDR3-IMGT (germline)	239	245	7	5	2	0	71.4
Total	N/A	N/A	231	215	16	0	93.1


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  S  F  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  
                    Query_3539   15   GTGCAGCCTCTGGATTCAGCTTTAGTGACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATTG  104
V  93.1% (215/231)  IGHV3-7*01   65   ..................C.......AG...........G................................................AA  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      E  K  D  G  S  E  K  N  Y  V  D  S  L  K  G  R  F  T  I  S  R  D  N  A  K  N  A  L  Y  L  
                    Query_3539   105  AGAAAGATGGAAGTGAGAAAAACTATGTGGACTCTCTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACGCACTGTATCTGC  194
V  93.1% (215/231)  IGHV3-7*01   155  ..C.................T..............G.........................................T............  244
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------CDR3-IMGT--------->                
                                      Q  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  V  G  G  S  G  W  L  P  D  Y  W  G  Q  G  T  
                    Query_3539   195  AGATGGACAGCCTGAGAGTCGAGGACACGGCTGTATATTACTGTGTGGGAGGATCGGGATGGCTCCCTGACTACTGGGGCCAGGGAACCC  284
V  93.1% (215/231)  IGHV3-7*01   245  .A...A............C...............G..........C.A...---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (5/5)     IGHD3-10*01  14   -----------------------------------------------------.....--------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------.......................  30

                                                        
                                      L  V  T  V  S  S  
                    Query_3539   285  TGGTCACCGTCTCCTCAG  302
J  100.0% (41/41)   IGHJ4*02     31   ..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_230100

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           377     1e-106
IGHD6-25*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTACAGTCACCGGCTTCACTGGT	CGGCTAC	CAA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTACAGTCACCGGCTTCACTGGTCGGCTACCAAGACTAC	ARVQSPASLVGYQDY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	99	15	0	86.8
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	293	267	26	0	91.1


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_3540   1    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCGGGAGGCACCTTCAGC  90
V  91.1% (267/293)  IGHV1-69*01  1    .....G.................G..........A.......................................T...............  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  F  M  P  I  F  G  A  A  D  Y 
                    Query_3540   91   AACTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGTTCATGCCTATCTTTGGTGCAGCGGACTAC  180
V  91.1% (267/293)  IGHV1-69*01  91   .G.....C.................................G..................A....C............A....AA.....  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  D  R  A  T  I  T  A  D  E  S  T  G  T  S  Y  M  E  L  R  N  L  K  S  E  D 
                    Query_3540   181  GCCCAGAAGTTCCAAGACAGAGCCACCATTACCGCGGACGAATCCACGGGCACATCCTATATGGAACTGAGGAACCTGAAATCTGAAGAC  270
V  91.1% (267/293)  IGHV1-69*01  181  ..A...........G.G.....T...G.....................A.....G....C.....G.....C.G.....G......G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  R  V  Q  S  P  A  S  L  V  G  Y  Q  D  Y  W  G  Q  G  T  L  V  T  V 
                    Query_3540   271  ACGGCCGTATATTACTGTGCGAGGGTACAGTCACCGGCTTCACTGGTCGGCTACCAAGACTACTGGGGCCAGGGAACCCTGGTCACCGTC  360
V  91.1% (267/293)  IGHV1-69*01  271  ........G..............-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (7/7)     IGHD6-25*01  12   -----------------------------------------------.......------------------------------------  18
J  100.0% (40/40)   IGHJ4*02     9    ---------------------------------------------------------.................................  41

                                             
                                       S  S  
                    Query_3540   361  TCCTCAG  367
J  100.0% (40/40)   IGHJ4*02     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_334461

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     9e-100
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGA	CCGTGGTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGACCGTGGTGACTACTTTGACCCC	ARGLHYYDRGDYFDP	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  R  V  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3541   1    ACCCTGTCCCTCACCTGCACTGTCTCTCGTGTCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.2% (238/250)  IGHV4-31*03  49   ...........................G...G...................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_3541   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAATAAGTCCCTCAAGAGTCGAATTACCATATCGGTAGACACGTCT  180
V  95.2% (238/250)  IGHV4-31*03  139  ..................................G............CCC................G..........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R 
                    Query_3541   181  AAGAACCAGTTCTCCCTGACGCTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCCATTACTATGACCGT  270
V  95.2% (238/250)  IGHV4-31*03  229  ...................A.....G...........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (10/10)   IGHD3-22*01  3    ----------------------------------------------------------------------------..........----  12

                                      ----------------->                                  
                                       G  D  Y  F  D  P  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_3541   271  GGTGACTACTTTGACCCCTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  322
J  93.8% (45/48)    IGHJ4*02     1    ----...........TA...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_172307

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            427     1e-121
IGHD3-22*01                                                                                           18.0    0.70  
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	CCGGCCAGTGTC	CTATGATAG	GGCGGGTTATCGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGACCGGCCAGTGTCCTATGATAGGGCGGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	AGDRPVSYDRAGYRPYFYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	282	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  C
                    Query_3542   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTG  90
V  96.9% (282/291)  IGHV1-2*04   6    ................................AG.......................................................A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_3542   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAATTATGCACA  180
V  96.9% (282/291)  IGHV1-2*04   96   .................................................................................C........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  Y  T  A  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_3542   181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGTACACGGCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  96.9% (282/291)  IGHV1-2*04   186  ...............................G.....T....................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  G  D  R  P  V  S  Y  D  R  A  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W  G  Q
                    Query_3542   271  CGTTTATTTCTGTGCGGGAGACCGGCCAGTGTCCTATGATAGGGCGGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGGGGCCA  360
V  96.9% (282/291)  IGHV1-2*04   276  ...G....A.......A....---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (9/9)     IGHD3-22*01  7    ---------------------------------.........------------------------------------------------  15
J  96.5% (55/57)    IGHJ6*02     6    ----------------------------------------------------------....A...........................  37

                                                               
                                        G  T  P  V  T  V  S  S 
                    Query_3542   361  AGGGACCCCGGTCACCGTCTCCTCA  385
J  96.5% (55/57)    IGHJ6*02     38   .......A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_197468

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD2-15*01                                                                                           10.3    132   
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CGAGAAG	GGTGG	CGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGACACGAGAAGGGTGGCGGGGCGAACGACTAC	VRHEKGGGANDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	6	2	0	75
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P  N  Y
                    Query_3543   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCCAATTA  90
V  93.8% (273/291)  IGHV5-51*01  6    ....................................C........................................GC...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  A  D  S  D  T  R  Y  S  L
                    Query_3543   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAACATCTATCCTGCTGACTCTGACACCAGATACAGTCT  180
V  93.8% (273/291)  IGHV5-51*01  96   .....................................................T...........G.........T...........C.C  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3543   181  GACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACACCGC  270
V  93.8% (273/291)  IGHV5-51*01  186  .T.....C.............................................................C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  I  V  S  S
                    Query_3543   271  CGTGTATTATTGTGTCAGACACGAGAAGGGTGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCATCGTCTCCTC  351
V  93.8% (273/291)  IGHV5-51*01  276  .A.......C....CG.....------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                               
D  100.0% (5/5)     IGHD2-15*01  14   ----------------------------.....------------------------------------------------  18
J  94.7% (36/38)    IGHJ4*02     9    -------------------------------------------....................C.......C.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_197469

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           313     1e-87
IGHD3-3*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCCA	GGAGTGG	GCGGACGGACG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCAGGAGTGGGCGGACGGACGCTACTTTGACTAC	ARLQEWADGRYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	27	25	22	3	0	88
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	242	221	21	0	91.3


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        L  S  L  T  C  E  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E  W
                    Query_3544   3    CCTGTCCCTCACCTGCGAAGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGAGACTGGAGTG  92
V  91.3% (221/242)  IGHV4-59*08  51   ................ACT...................G........................................G..........  140
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W

                                      ---------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IM
                                        L  G  Y  V  S  Y  S  G  R  T  D  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N  Q
                    Query_3544   93   GCTTGGGTATGTCTCTTATAGTGGGAGAACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCGAAGAACCA  182
V  91.3% (221/242)  IGHV4-59*08  141  .A........A...A...C........C...A..................................A..............C........  230
                                        I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q

                                      GT----------------------------------------------------><----------------CDR3-IMGT---------
                                        F  Y  L  K  L  S  S  V  I  A  E  D  T  A  L  Y  Y  C  A  R  L  Q  E  W  A  D  G  R  Y  F
                    Query_3544   183  ATTCTACCTGAAACTGAGCTCTGTGATCGCCGAAGACACGGCCCTCTATTATTGTGCGAGACTCCAGGAGTGGGCGGACGGACGCTACTT  272
V  91.3% (221/242)  IGHV4-59*08  231  G....C......G.............C.....C..........G.G.....C..........----------------------------  292
                                        F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                              
D  100.0% (7/7)     IGHD3-3*01   15   ------------------------------------------------------------------.......-----------------  21
J  97.9% (46/47)    IGHJ4*02     2    ------------------------------------------------------------------------------------......  7

                                      ------>                                  
                                        D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_3544   273  TGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ4*02     8    ...................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_197467

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD3-10*01                                                                                           16.1    2.6   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTC	TCGGGGAG	GGGGTCGTTCGACTCCTCTATAGTCCTATACTTCTTCAATTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCTCGGGGAGGGGGTCGTTCGACTCCTCTATAGTCCTATACTTCTTCAATTAT	ARHVSGRGSFDSSIVLYFFNY	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	268	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  E  D  S  F  N  N  F
                    Query_3545   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGATCTGAAGACAGCTTTAATAATTT  90
V  92.1% (268/291)  IGHV5-51*01  6    ..............................A...................................T....G.T.........CC.GC.A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  R  P  G  K  G  L  E  W  M  G  F  I  Y  P  G  D  S  G  T  K  Y  S  P
                    Query_3545   91   CTGGATCGCCTGGGTGCGCCAGAGGCCCGGGAAAGGCCTGGAGTGGATGGGGTTCATCTATCCTGGTGACTCTGGTACCAAGTACAGCCC  180
V  92.1% (268/291)  IGHV5-51*01  96   ........G..............T............................A.....................A.....GA........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  I  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  T  S  L  K  A  S  D  S  A
                    Query_3545   181  GTCCTTCCAAGGCCAGATCACCATCTCAGCCGACAAGTCCACCAGTACCGCCTACCTGCAGTGGACTAGTCTGAAGGCCTCGGACAGCGC  270
V  92.1% (268/291)  IGHV5-51*01  186  ................G........................T...C...................GC..C................C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        M  Y  Y  C  A  R  H  V  S  G  R  G  S  F  D  S  S  I  V  L  Y  F  F  N  Y  W  G  Q  G  T
                    Query_3545   271  CATGTATTATTGTGCGAGACATGTCTCGGGGAGGGGGTCGTTCGACTCCTCTATAGTCCTATACTTCTTCAATTATTGGGGCCAGGGAAC  360
V  92.1% (268/291)  IGHV5-51*01  276  .........C...........---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-10*01  14   -------------------------........---------------------------------------------------------  21
J  100.0% (34/34)   IGHJ4*02     15   ----------------------------------------------------------------------------..............  28

                                                          
                                        L  V  T  V  S  S  
                    Query_3545   361  CCTGGTCACCGTCTCCTCAG  380
J  100.0% (34/34)   IGHJ4*02     29   ....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_197464

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_3546   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_3546   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_3546   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_3546   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_197462

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            380     1e-107
IGHD3-3*01                                                                                            18.0    0.66  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	CGGAAAGAGCGGACTCA	ATTTTTGGA	ATCATTGTGCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGCAGAGCGGAAAGAGCGGACTCAATTTTTGGAATCATTGTGCCTTTTGACTTC	GRAERADSIFGIIVPFDF	273	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	25	2	0	92.6
FR3-IMGT	159	272	114	104	10	0	91.2
CDR3-IMGT (germline)	273	279	7	5	2	0	71.4
Total	N/A	N/A	279	261	18	0	93.5


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        E  L  V  K  P  S  Q  T  L  S  L  T  R  A  I  S  G  D  S  V  S  S  D  R  A  A  W  N  W  
                    Query_3547  1    CAGAACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCCGTGCCATCTCCGGGGACAGTGTCTCTAGCGACCGTGCTGCTTGGAACTGGA  90
V  93.5% (261/279)  IGHV6-1*01  26   ...G..................................T.............................A..A..................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  Y  D  Y  A  V  S  V  K  
                    Query_3547  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATATTACAGGTCCAAGTGGTATTATGATTATGCAGTATCTGTGAAGA  180
V  93.5% (261/279)  IGHV6-1*01  116  ..............................................C..................A......................A.  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  M  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  K  S  V  S  P  D  D  T  A  V  Y  Y  
                    Query_3547  181  GTCGAATGACCATCAATCCAGACACATCCAAGAACCAATTTTCCCTGCAGTTGAAGTCTGTGAGTCCCGACGACACGGCTGTCTATTACT  270
V  93.5% (261/279)  IGHV6-1*01  206  .......A........C....................G..C.........C....C.......C......G...........G.......  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------------------CDR3-IMGT--------------------->                                  
                                     C  G  R  A  E  R  A  D  S  I  F  G  I  I  V  P  F  D  F  W  D  Q  G  T  L  V  P  V  S  S  
                    Query_3547  271  GTGGCAGAGCGGAAAGAGCGGACTCAATTTTTGGAATCATTGTGCCTTTTGACTTCTGGGACCAGGGAACCCTGGTCCCCGTCTCCTCAG  360
V  93.5% (261/279)  IGHV6-1*01  296  ...CA....---------------------------------------------------------------------------------  304
                                     C  A  R                                                                                   
D  100.0% (9/9)     IGHD3-3*01  9    --------------------------.........-------------------------------------------------------  17
J  93.0% (40/43)    IGHJ4*02    6    -----------------------------------------------.......A.....G................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_197463

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           300     8e-84
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	218	26	0	89.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  P  S  P  G  K  R  L  E  
                    Query_3548   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCCGTCCCCAGGGAAGAGACTGGAGT  93
V  89.3% (218/244)  IGHV4-59*02  50   .....TCC...A....C.............G..........AG...C.......G...........A.C...........G.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N  
                    Query_3548   94   GGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAACC  183
V  89.3% (218/244)  IGHV4-59*02  140  ......G....A...A.T.......G.G............C..C....................CA........................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------CDR3-IMGT--------->    
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W  
                    Query_3548   184  AGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGGG  273
V  89.3% (218/244)  IGHV4-59*02  230  ..........G.A.................................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  88.0% (44/50)    IGHJ3*02     1    ----------------------------------------------------------------------...T..T..T..........  20

                                                                    
                                      G  P  G  T  M  V  P  V  S  S  
                    Query_3548   274  GCCCAGGGACAATGGTCCCCGTGTCTTCAG  303
J  88.0% (44/50)    IGHJ3*02     21   ...A.............A....C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_197460

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AATATGGAACCCCCTGGGCAAAGTGA	TGGCTGGT	TT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAATATGGAACCCCCTGGGCAAAGTGATGGCTGGTTTTACTTTGACCAC	AKNMEPPGQSDGWFYFDH	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  V  S  W  V  R  L  A  P  G  K  G  L  
                    Query_3549   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCGTGAGCTGGGTCCGTCTGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (231/248)  IGHV3-23*01  47   .....................................................A.............C.A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  L  G  G  R  N  T  Y  Y  A  D  F  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3549   91   AGTGGGTCGCATCTATTAGTCTGGGTGGTCGTAACACATACTACGCAGACTTCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (231/248)  IGHV3-23*01  137  ........T..G........GGTA.....G...G.................C......................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  N  T  L  S  L  Q  M  N  S  L  R  T  E  D  T  A  V  Y  Y  C  A  K  N  M  E  P  P  G  Q  
                    Query_3549   181  GAAACACGCTGTCTCTGCAAATGAACAGCCTGAGAACCGAGGACACGGCCGTCTATTACTGTGCGAAAAATATGGAACCCCCTGGGCAAA  270
V  93.1% (231/248)  IGHV3-23*01  227  AG..........A......................G................A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      IMGT--------------------->                                  
                                      S  D  G  W  F  Y  F  D  H  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_3549   271  GTGATGGCTGGTTTTACTTTGACCACTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  330
D  100.0% (8/8)     IGHD6-19*01  12   ----........------------------------------------------------  19
J  95.7% (44/46)    IGHJ4*02     3    --------------.........T....................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_197461

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3550   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_3550   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_3550   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3550   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_273696

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3551   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ......................................C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_3551   91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P 
                    Query_3551   181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC  270
V  90.6% (221/244)  IGHV4-59*01  229  ...........G...C....C...........T............G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  95.7% (44/46)    IGHJ5*02     6    ------------------------------------------------------------------------------............  17

                                                                        
                                       W  G  Q  G  A  L  V  S  V  S  S  
                    Query_3551   271  TGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  304
J  95.7% (44/46)    IGHJ5*02     18   ............A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_56022

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           375     3e-106
IGHD5-18*01                                                                                           18.0    0.65  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	GGATACGCCTATGGT	CATGT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGATACGCCTATGGTCATGTCTAC	AREGYAYGHVY	291	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	64	7	0	90.1
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	46	5	0	90.2
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	106	8	0	93
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	292	266	26	0	91.1


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  F  K  K  P  G  S  S  V  R  V  S  C  K  A  Y  G  G  P  F  S  S  
                    Query_3552   7    TGCAGCTGGTGCAGTCTGGAGCCGAGTTTAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGCAAGGCCTATGGCGGCCCCTTCAGCAGTT  96
V  91.1% (266/292)  IGHV1-69*01  5    ...................G..T...G.G......................A...............T.C...A...A..........C.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  A  I  S  W  I  R  Q  A  P  G  L  G  L  E  W  M  V  G  I  I  P  I  L  G  P  A  N  Y  A  
                    Query_3552   97   ACGCTATTAGCTGGATTCGACAGGCCCCTGGACTAGGGCTTGAGTGGATGGTAGGGATCATCCCTATCCTTGGTCCAGCAAACTACGCAG  186
V  91.1% (266/292)  IGHV1-69*01  95   .T.....C......G.G................A.................G................T.....A..............C  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      V  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  L  E  V  K  S  L  R  S  E  D  T  
                    Query_3552   187  TGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACTTGGAGGTGAAAAGCCTGCGATCTGAGGACACGG  276
V  91.1% (266/292)  IGHV1-69*01  185  A.......................................................A.....C...GC......A...............  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-----------CDR3-IMGT----------->                                
                                      A  V  Y  Y  C  A  R  E  G  Y  A  Y  G  H  V  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3552   277  CCGTGTATTATTGTGCGAGAGAAGGATACGCCTATGGTCATGTCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  355
V  91.1% (266/292)  IGHV1-69*01  275  ..........C...........---------------------------------------------------------  296
                                      A  V  Y  Y  C  A  R                                                            
D  86.7% (13/15)    IGHD5-18*01  3    -----------------------......AG.......-----------------------------------------  17
J  100.0% (36/36)   IGHJ4*02     11   -------------------------------------------....................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_273694

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*03                                                                                           321     6e-90
IGHD4-17*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*03	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGAATAC	AG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGAATACAGCAACTGGATCGACCCC	ARDSGEYSNWIDP	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	228	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  V  S  S  A  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_3553   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCGTCAGCAGTGCTAGTTACTACTGGACATGGATCCGGCAGCCCCCAGGAAAGGGG  90
V  90.8% (228/251)  IGHV4-61*03  49   ...................C...........G..............G..............GC....................G.....A  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  N  R  G  R  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  A  D  T  S 
                    Query_3553   91   CTGGAGTGGATCGGTAATATCTATAACAGAGGGCGCACCAATTATAATCCCTCCCTCCAAAGTCGAGTCACCATATCAGCAGACACATCC  180
V  90.8% (228/251)  IGHV4-61*03  139  ...........T..GT........T....T...A.......C..C..C.........A.G...................T......G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  G  E  Y  S  N 
                    Query_3553   181  AAGAACCACTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATTCCGGTGAATACAGCAAC  270
V  90.8% (228/251)  IGHV4-61*03  229  .....................C...G...........................G.................-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD4-17*01  7    --------------------------------------------------------------------------......C...------  16
J  92.0% (46/50)    IGHJ5*02     2    --------------------------------------------------------------------------------------....  5

                                      ----------->                                  
                                       W  I  D  P  W  G  Q  G  A  L  V  I  V  S  S  
                    Query_3553   271  TGGATCGACCCCTGGGGCCAGGGAGCCCTGGTCATTGTCTCCTCAG  316
J  92.0% (46/50)    IGHJ5*02     6    ...T....................A.........CC..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_273695

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAG	CCCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGCCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3554   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3554   91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*01  139  ........GT........T.......G...............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_3554   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGCCCGGGA  270
V  95.5% (234/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.4% (17/18)    IGHD3-16*01  7    -----------------------------------------------------------------....T.............-------  24

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3554   271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_56027

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     4e-93
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_3555   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  S  L  K  P  R  V  T  I  S  L  D  T  S  K  N 
                    Query_3555   91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCTCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-59*08  139  ...A....G......T.......T..............................AG............A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G 
                    Query_3555   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGT  270
V  93.4% (228/244)  IGHV4-59*08  229  .............A......C..........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_3555   271  TATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  334
J  94.2% (49/52)    IGHJ1*01     1    ------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_56026

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD3-16*02                                                                                           37.2    1e-06 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGTC	CGTTTGGGGGAATTATCGTTAT	TTGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCGTTTGGGGGAATTATCGTTATTTGGGCTAC	ARGSVWGNYRYLGY	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	73	1	0	98.6
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	109	5	0	95.6
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	284	9	0	96.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_3556   5    AGGTGCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  94
V  96.9% (284/293)  IGHV5-51*01  2    .............G............................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  I  R  Y  
                    Query_3556   95   GCTATTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATATCAGATACA  184
V  96.9% (284/293)  IGHV5-51*01  92   ....C...................................................A........................C........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  T  T  T  A  Y  L  Q  W  N  S  L  K  A  S  D  
                    Query_3556   185  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCACCACTACCGCCTACCTGCAGTGGAACAGCCTGAAGGCCTCGGACA  274
V  96.9% (284/293)  IGHV5-51*01  182  .............................................T..GC...................G....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  I  Y  Y  C  A  R  G  S  V  W  G  N  Y  R  Y  L  G  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_3556   275  CCGCCATATATTACTGTGCGAGAGGGTCCGTTTGGGGGAATTATCGTTATTTGGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  364
V  96.9% (284/293)  IGHV5-51*01  272  .......G...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  95.5% (21/22)    IGHD3-16*02  13   ----------------------------...........G..........----------------------------------------  34
J  100.0% (38/38)   IGHJ4*02     11   -------------------------------------------------------...................................  45

                                         
                                      S  
                    Query_3556   365  CAG  367
J  100.0% (38/38)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_56025

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            318     6e-89
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ5*01                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAGGGGG	AGCAGTGGCTGGTAC	ACGGGCCCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGGGGGAGCAGTGGCTGGTACACGGGCCCCTTCGACTCC	ARVRGSSGWYTGPFDS	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  A  G  S  I  T  S  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_3557   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGCTGGCTCCATCACTAGTAATAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.1% (225/247)  IGHV4-4*02   49   ............................G...........GC....G...C.......................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  A  N  Y  Q  P  S  L  W  S  R  V  T  I  S  L  D  R  S  K 
                    Query_3557   91   GAGTGGATTGGAGAAATCTATCATAGTGGGAGCGCCAACTATCAGCCGTCCCTCTGGAGCCGAGTCACCATATCACTAGACAGGTCCAAG  180
V  91.1% (225/247)  IGHV4-4*02   139  ...........G.....................A.......CA.C.........AA...T...............G......A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  Q  F  S  M  D  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  G  S  S  G  W  Y 
                    Query_3557   181  AACCAGTTCTCCATGGACTTGAACTCAGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGAGAGTAAGGGGGAGCAGTGGCTGGTAC  270
V  91.1% (225/247)  IGHV4-4*02   229  ............C..A.GC...G...T.......................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (15/15)   IGHD6-19*01  7    ---------------------------------------------------------------------------...............  21

                                      ----------------->                                  
                                       T  G  P  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_3557   271  ACGGGCCCCTTCGACTCCTGGGGCCAGGGAATCCTGGTCACCGTCTCGTCAG  322
J  93.0% (40/43)    IGHJ5*01     9    ---------.................A....C...............C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_144674

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	274	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_3558   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  95.1% (274/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_3558   91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  95.1% (274/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_3558   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  95.1% (274/288)  IGHV5-51*01  186  ...............G.........................T.........................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3558   271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  95.1% (274/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_56029

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           299     2e-83
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTC	TAGCAGCATCTGG	GGTTGGCGCTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCTAGCAGCATCTGGGGTTGGCGCTCACTACTACGGTGCGGACGTC	ATLAASGVGAHYYGADV	230	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	48	3	0	94.1
CDR2-IMGT	92	115	24	24	0	0	100
FR3-IMGT	116	229	114	105	9	0	92.1
CDR3-IMGT (germline)	230	233	4	4	0	0	100
Total	N/A	N/A	221	206	15	0	93.2


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  L  T  F  S  I  Y  G  M  H  W  V  R  Q  A  P  D  R  G  L  E  W  V  A  V  I  W  Y  D
                    Query_3559   13   GTCTGGACTCACCTTCAGTATCTATGGAATGCACTGGGTCCGCCAGGCTCCAGACAGGGGACTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  93.2% (206/221)  IGHV3-33*01  72   .......T............G......C.........................G..A...G.............................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  D  T  L  Y  L  Q  M  N
                    Query_3559   103  TGGAAGTAATAAATTTTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGGACACGTTGTATCTGCAAATGAA  192
V  93.2% (206/221)  IGHV3-33*01  162  ..............AC...................................................A.....C................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------------CDR3-IMGT-------------------->  
                                        S  L  T  V  E  D  T  A  V  Y  Y  C  A  T  L  A  A  S  G  V  G  A  H  Y  Y  G  A  D  V  W
                    Query_3559   193  CAGTCTGACAGTGGAGGACACGGCTGTGTATTATTGTGCGACTCTAGCAGCATCTGGGGTTGGCGCTCACTACTACGGTGCGGACGTCTG  282
V  93.2% (206/221)  IGHV3-33*01  252  ...C....G..CC....................C.......-------------------------------------------------  292
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                   
D  92.3% (12/13)    IGHD6-13*01  6    --------------------------------------------........G....---------------------------------  18
J  96.2% (51/53)    IGHJ6*02     10   --------------------------------------------------------------------...........AT.........  31

                                                                     
                                        G  Q  G  T  T  V  T  V  S  S 
                    Query_3559   283  GGGCCAAGGGACCACGGTCACCGTCTCCTCA  313
J  96.2% (51/53)    IGHJ6*02     32   ...............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_683

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           353     9e-100
IGHD1-26*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	AGAGAGAGG	GTGGGGGCTACTAC	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATAAGAGAGAGGGTGGGGGCTACTACAACTACTTTGACTAC	AKDKREGGGYYNYFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	252	10	10	0	0	100
Total	N/A	N/A	252	239	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  D  Y  S  M  H  W  V  R  Q  G  P  G  K  G  L  
                    Query_3560   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACCTTTGAAGATTATAGTATGCACTGGGTCCGTCAAGGTCCGGGGAAGGGTCTGG  90
V  94.8% (239/252)  IGHV3-43*01  47   ...............................A...........T.......CC...................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  I  T  W  D  G  S  S  T  Q  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3560   91   AGTGGGTCTCTCTTATCACTTGGGATGGTAGTAGTACACAGTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCA  180
V  94.8% (239/252)  IGHV3-43*01  137  ................T.G..........G....C...T.C.................................................  226
                                      E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  F  Y  Y  C  A  K  D  K  R  E  G  G  G  
                    Query_3560   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTTTATTACTGTGCAAAAGATAAGAGAGAGGGTGGGGGCT  270
V  94.8% (239/252)  IGHV3-43*01  227  .A..................................................G...................------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A  K  D                    
D  92.9% (13/14)    IGHD1-26*01  7    ---------------------------------------------------------------------------------.....A...  15

                                      T------------------>                                  
                                      Y  Y  N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3560   271  ACTACAACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  92.9% (13/14)    IGHD1-26*01  16   .....-------------------------------------------------  20
J  100.0% (48/48)   IGHJ4*02     1    ------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_273698

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*13                                                                                           360     1e-101
IGHD1-26*01                                                                                           10.3    128   
IGHJ3*01                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*13	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGAT	N/A	GGAGC	GCAATGCCGGAGCGCCAA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATGGAGCGCAATGCCGGAGCGCCAAATGCTTTTGATGTC	ARMERNAGAPNAFDV	263	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	44	2	0	95.7
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	49	2	0	96.1
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	101	13	0	88.6
CDR3-IMGT (germline)	263	270	8	7	1	0	87.5
Total	N/A	N/A	270	250	20	0	92.6


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  V  T  C  T  F  S  G  F  S  L  T  T  S  G  M  S  V  A  W  I  R
                    Query_3561   1    GCTGGTGAAACCCACACAGACCCTCACGGTGACCTGCACCTTCTCTGGGTTCTCACTCACCACTAGTGGAATGAGTGTGGCCTGGATCCG  90
V  92.6% (250/270)  IGHV2-70*13  30   ...........................AC..............................G.............T.....AG.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  N  S  S  L  K  T  R  L  T
                    Query_3561   91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACTCATTGATTGGGATGATGATAAATACTACAATTCATCTCTGAAGACCAGGCTCAC  180
V  92.6% (250/270)  IGHV2-70*13  120  .................................................................GCA......................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  M  D  A  S  K  N  Q  V  V  L  T  L  T  N  I  D  P  V  D  T  G  T  Y  F  C  A  R  M
                    Query_3561   181  CATCTCCATGGACGCCTCCAAAAACCAGGTAGTCCTGACACTGACCAACATAGACCCCGTGGACACAGGCACCTATTTTTGTGCGCGGAT  270
V  92.6% (250/270)  IGHV2-70*13  210  ........A....A................G.....T...A..........G.....T..........C...G....A......A.....  299
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                      ----------CDR3-IMGT----------------->                                  
                                        E  R  N  A  G  A  P  N  A  F  D  V  W  G  Q  G  A  T  V  T  V  S  S  
                    Query_3561   271  GGAGCGCAATGCCGGAGCGCCAAATGCTTTTGATGTCTGGGGCCAAGGGGCAACGGTCACCGTCTCTTCAG  341
D  100.0% (5/5)     IGHD1-26*01  10   .....------------------------------------------------------------------  14
J  95.8% (46/48)    IGHJ3*01     3    -----------------------..........................A...T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_70815

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         316     2e-88
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	AGTTC	CTATGATAGTAGTGGTT	CTTCCCTTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAAGTTCCTATGATAGTAGTGGTTCTTCCCTTAACTACTTTGACTAC	ARSSYDSSGSSLNYFDY	261	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	41	44	4	4	0	0	100
CDR1-IMGT	45	74	30	28	2	0	93.3
FR2-IMGT	75	125	51	51	0	0	100
CDR2-IMGT	126	146	21	20	1	0	95.2
FR3-IMGT	147	260	114	105	9	0	92.1
CDR3-IMGT (germline)	261	266	6	6	0	0	100
Total	N/A	N/A	226	214	12	0	94.7


Alignments

                                        <FR><----------CDR1-IMGT---------><--------------------FR2-IMGT---------------------><----
                                          S  G  G  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y
                    Query_3562     41   CTCTGGTGGCTCCATCAGGAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTA  130
V  94.7% (214/226)  IGHV4-30-4*01  72   ..................C.......A...............................................................  161
                                          S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y

                                        -CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-------------
                                          Y  S  G  S  T  S  Y  N  P  S  L  K  S  R  L  I  I  S  V  D  N  S  K  N  Q  F  S  V  R  L
                    Query_3562     131  TTACAGTGGGAGCACGTCCTACAACCCGTCCCTCAAGAGTCGACTTATCATATCAGTGGACAACTCCAAGAACCAGTTCTCCGTGAGGCT  220
V  94.7% (214/226)  IGHV4-30-4*01  162  ...............C.A.........................G...C.........A....CG..................C...A...  251
                                          Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L

                                        ---------------------------------------><--------------------CDR3-IMGT--------------------
                                          S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  Y  D  S  S  G  S  S  L  N  Y  F  D  Y
                    Query_3562     221  GAGCTCTGTGACTGCCGCAGACACGGCCGTCTATTACTGTGCCAGAAGTTCCTATGATAGTAGTGGTTCTTCCCTTAACTACTTTGACTA  310
V  94.7% (214/226)  IGHV4-30-4*01  252  ..............................G...............--------------------------------------------  297
                                          S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                                             
D  100.0% (17/17)   IGHD3-22*01    7    ---------------------------------------------------.................----------------------  23
J  97.9% (47/48)    IGHJ4*02       1    -----------------------------------------------------------------------------.............  13

                                        >                                  
                                          W  G  R  G  T  L  V  T  V  S  S  
                    Query_3562     311  CTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  345
J  97.9% (47/48)    IGHJ4*02       14   ........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_55596

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           321     6e-90
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_3563   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_3563   91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_3563   181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.8% (225/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_3563   271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_55597

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           422     2e-120
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAAGCCGGC	TACTGTGGTTCGGGG	GAGTT	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAAGCCGGCTACTGTGGTTCGGGGGAGTTGTATGGACGTC	AREKPATVVRGSCMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  F  T  F  T  T  Y 
                    Query_3564   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTTCACCTTTACCACCTAT  91
V  96.6% (280/290)  IGHV1-18*01  7    .........................................................................A...........G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  K  T  N  Y  G  Q 
                    Query_3564   92   GGCATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCCCTTACAATGGTAAAACAAACTATGGACAG  181
V  96.6% (280/290)  IGHV1-18*01  97   ..T....G..........................................A.........G.............C..........C....  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  V  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  T  S  L  R  S  D  D  T  A 
                    Query_3564   182  AAGGTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGACGAGCCTGAGATCTGACGACACGGCC  271
V  96.6% (280/290)  IGHV1-18*01  187  ...C............................................................G.........................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  E  K  P  A  T  V  V  R  G  S  C  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_3564   272  GTGTATTACTGTGCGAGAGAAAAGCCGGCTACTGTGGTTCGGGGGAGTTGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  361
V  96.6% (280/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  93.3% (14/15)    IGHD3-10*01  5    -----------------------------....A..........----------------------------------------------  19
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------.........................................  59

                                         
                                       S 
                    Query_3564   362  TCA  364
J  100.0% (44/44)   IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_55594

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           392     2e-111
IGHD6-6*01                                                                                            21.8    0.046 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCC	ATAGCAGCTCG	GATGGGGA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCATAGCAGCTCGGATGGGGAACTTTGACTCC	AAIAARMGNFDS	292	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	72	3	0	96
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	19	5	0	79.2
FR3-IMGT	178	291	114	108	6	0	94.7
CDR3-IMGT (germline)	292	294	3	3	0	0	100
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  V  S 
                    Query_3565   4    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCCGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCGTCAGT  93
V  93.1% (271/291)  IGHV1-69*01  1    ...G...................G.................T..........................................T....C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  L  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  L  L  R  T  A  N  Y 
                    Query_3565   94   AGGTATCTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGATCATCCCTCTTTTAAGGACAGCAAACTAC  183
V  93.1% (271/291)  IGHV1-69*01  91   ..C...GC.................................G...........................A.C..TG.T............  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  H  E  S  T  S  T  V  Y  M  E  V  N  S  L  G  S  Q  D 
                    Query_3565   184  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGCACGAATCCACGAGCACAGTCTACATGGAGGTGAACAGCCTGGGATCTCAGGAC  273
V  93.1% (271/291)  IGHV1-69*01  181  ....................................G..................C..........C...G.......A.....G.....  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                
                                       T  A  V  Y  Y  C  A  A  I  A  A  R  M  G  N  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3565   274  ACGGCCGTGTATTACTGTGCGGCCATAGCAGCTCGGATGGGGAACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  359
V  93.1% (271/291)  IGHV1-69*01  271  .....................-----------------------------------------------------------------  291
                                       T  A  V  Y  Y  C  A                                                                  
D  100.0% (11/11)   IGHD6-6*01   5    ------------------------...........---------------------------------------------------  15
J  97.7% (42/43)    IGHJ4*02     4    -------------------------------------------.........A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_55595

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           350     7e-99
IGHD2-8*01                                                                                            10.3    112  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	CTCACCGGA	GGTGT	T	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CTCACCGGAGGTGTT	LTGGV	249	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	109	5	0	95.6
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  T  S  G  F  N  F  G  D  F  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3566   1    GGTCCCTGAGACTCTCCTGTACAACTTCTGGATTCAATTTTGGTGATTTTGCTTTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-49*04  47   .......................G............CC..........A....A....................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  G  K  A  Y  G  W  T  T  E  Y  A  A  S  V  K  G  R  F  S  I  S  R  D  
                    Query_3566   91   AGTGGGTAGGTTTCATTAGAGGCAAAGCTTATGGTTGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCAGCATCTCTAGAGATG  180
V  95.2% (236/248)  IGHV3-49*04  137  ....................A..............G.......................................C......A.......  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--CDR3-IMGT-->       
                                      D  S  N  G  I  A  Y  L  Q  M  K  S  L  K  T  E  D  T  A  V  Y  Y  C  L  T  G  G  V  W  G  
                    Query_3566   181  ATTCCAACGGCATCGCCTATCTGCAAATGAAGAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTCTCACCGGAGGTGTTTGGGGCC  270
V  95.2% (236/248)  IGHV3-49*04  227  .......AA......................C....................................----------------------  294
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  100.0% (5/5)     IGHD2-8*01   17   -----------------------------------------------------------------------------.....--------  21
J  97.1% (33/34)    IGHJ4*02     15   -----------------------------------------------------------------------------------.......  21

                                                                 
                                      Q  G  T  L  V  S  V  S  S  
                    Query_3566   271  AGGGAACCCTGGTCAGCGTCTCCTCAG  297
J  97.1% (33/34)    IGHJ4*02     22   ...............C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_55598

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTTTATTACCT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTATTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_3567   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTTCCACTTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ..............................................................................C...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  P
                    Query_3567   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAGTCC  180
V  95.2% (277/291)  IGHV5-51*01  96   C.......G.................................................T.................A..........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_3567   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .......C.....................C...............C...........................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_3567   271  CATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTATTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD1-26*01  4    -----------------------------...G....A.....-----------------------------------------------  17
J  98.0% (48/49)    IGHJ6*02     14   ------------------------------------------------------....................................  49

                                                   
                                        T  V  S  S 
                    Query_3567   361  CACCGTCTCGTCA  373
J  98.0% (48/49)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_55599

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           235     4e-64
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	ARGLLIEDPNYVWGSFRRNHNCYTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	91	23	0	79.8
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	197	47	0	80.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  R  L  E 
                    Query_3568   1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGGACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGAGACTGGAG  90
V  80.7% (197/244)  IGHV4-59*01  49   ..................A....C.......G.......A.T.G..........AG....A.C........C.......A.G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  N  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_3568   91   TGGCTTGGCTTCTTCTTATCCACTGGCAACACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  80.7% (197/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G...G.G....A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  H  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  N  Y 
                    Query_3568   181  CAGTTGTCTCTCCACCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCAACTAT  270
V  80.7% (197/244)  IGHV4-59*01  229  .....C..C..GA.G....G.TCT.....................GT.....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  R  G  T  P  V  T  V  S  S  
                    Query_3568   271  GTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCGAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  92.1% (35/38)    IGHJ3*01     13   --------------------------------------...........A.......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_283913

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           302     3e-84
IGHD3-3*01                                                                                            35.3    4e-06
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATGGTAAAAGA	GATTTTTGGAGTGGTTTTTAT	TTAGGGTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATGGTAAAAGAGATTTTTGGAGTGGTTTTTATTTAGGGTAT	ARNGKRDFWSGFYLGY	230	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	48	3	0	94.1
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	105	9	0	92.1
CDR3-IMGT (germline)	230	235	6	6	0	0	100
Total	N/A	N/A	223	208	15	0	93.3


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  S  Y  G  M  Y  W  V  R  Q  A  P  G  K  G  L  E  W  M  A  V  I  W  N  D
                    Query_3569   13   GTCTGGATTCACCTTCAGCAGTTATGGCATGTACTGGGTCCGGCAGGCTCCAGGCAAGGGGCTGGAGTGGATGGCAGTTATATGGAATGA  102
V  93.3% (208/223)  IGHV3-33*01  72   ..................T..C.........C..........C...........................G..............T....  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  N  K  S  T  L  Y  L  Q  M  D
                    Query_3569   103  TGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATAACAAGAGCACGCTCTATCTGCAAATGGA  192
V  93.3% (208/223)  IGHV3-33*01  162  ..............................................A..............TC.....A......G............A.  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-------------------CDR3-IMGT------------------>     
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  N  G  K  R  D  F  W  S  G  F  Y  L  G  Y  W  G
                    Query_3569   193  CAGTCTGAGGGCCGAGGACACGGCTGTGTATTATTGTGCGAGAAATGGTAAAAGAGATTTTTGGAGTGGTTTTTATTTAGGGTATTGGGG  282
V  93.3% (208/223)  IGHV3-33*01  252  ...C.....A.......................C.........-----------------------------------------------  294
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  95.2% (20/21)    IGHD3-3*01   8    -------------------------------------------------------................A....--------------  28
J  97.1% (33/34)    IGHJ4*02     15   -------------------------------------------------------------------------------------.....  19

                                                                   
                                        Q  G  A  L  V  T  V  S  S  
                    Query_3569   283  CCAGGGAGCCCTGGTCACCGTCTCCTCAG  311
J  97.1% (33/34)    IGHJ4*02     20   .......A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_292374

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_3570   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_3570   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_3570   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_3570   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_292375

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-20*01                                                                                           327     8e-92
IGHD4-17*01                                                                                           12.2    30   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-20*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGG	ACGGTG	GC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGACGGTGGCGACTTC	ARGDGGDF	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  N  F  D  D  Y  G  M  S  W  V  R  Q  V  P  G  K  G  L  
                    Query_3571   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCAACTTCGATGATTATGGCATGAGCTGGGTCCGCCAAGTTCCAGGGAAGGGTCTGG  90
V  92.0% (229/249)  IGHV3-20*01  47   .....................C..............C...T...............................C............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  K  S  G  A  T  G  Y  A  E  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_3571   91   AGTGGGTCTCTGGTATTAATTGGAAAAGTGGTGCCACAGGTTATGCAGAGTCTGTGGAGGGCCGATTCACCATTTCGAGAGACAACGCCC  180
V  92.0% (229/249)  IGHV3-20*01  137  .........................TG.....AG...............C......A................C..C............A  226
                                      E  W  V  S  G  I  N  W  N  G  G  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      Q  R  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  F  Y  R  C  A  R  G  D  G  G  D  F  W  
                    Query_3571   181  AGAGGTCCCTGTATCTGCAAATGAACAGTCTGAGAGTCGAGGATACGGCCTTCTATCGCTGTGCGAGAGGGGACGGTGGCGACTTCTGGG  270
V  92.0% (229/249)  IGHV3-20*01  227  ...AC...............................C......C........G....A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R                       
D  100.0% (6/6)     IGHD4-17*01  6    ------------------------------------------------------------------------......------------  11
J  95.0% (38/40)    IGHJ4*02     9    --------------------------------------------------------------------------------....A.....  18

                                                                    
                                      G  Q  G  T  L  V  I  V  S  S  
                    Query_3571   271  GCCAGGGAACCCTGGTCATCGTCTCCTCAG  300
J  95.0% (38/40)    IGHJ4*02     19   ..................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_307179

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3572   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  98.4% (239/243)  IGHV4-59*01  49   ......................................................................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3572   91   TGGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  .........T................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_3572   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (18/20)    IGHD5-18*01  1    ----------------------------------------------------------------..........C.....T...------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3572   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_307178

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           382     3e-108
IGHD2-21*02                                                                                           10.3    122   
IGHJ6*02                                                                                              114     2e-29 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAAAA	GTGAC	CCGCAAAC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAAAAGTGACCCGCAAACACTACTACTACTACGGTATGGACGTC	ATKVTRKHYYYYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	245	1	0	99.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3573   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.6% (245/246)  IGHV3-23*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3573   91   AGTGGGTCTCAACTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  99.6% (245/246)  IGHV3-23*01  137  ...........G..............................................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  K  V  T  R  K  H  Y  
                    Query_3573   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGACAAAAGTGACCCGCAAACACTACT  270
V  99.6% (245/246)  IGHV3-23*01  227  ..................................................................------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*02  15   -----------------------------------------------------------------------.....--------------  19
J  100.0% (59/59)   IGHJ6*02     4    ------------------------------------------------------------------------------------......  9

                                      T------------------>                                 
                                      Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3573   271  ACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  100.0% (59/59)   IGHJ6*02     10   .....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_292371

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     6e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_3574   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_3574   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_3574   181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_3574   271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_292372

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*09                                                                                           325     3e-91
IGHD3-10*01                                                                                           37.2    9e-07
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*09	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCACTC	CTATGGATCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTCCTATGGATCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  T  F  T  G  Y  F  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3575   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGACCTTTACTGGTTATTTCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAG  90
V  92.6% (226/244)  IGHV4-34*09  49   .................................T....C.G......C.A.....G...........................A......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_3575   91   TGGATTGGGGAAATCAGTCATAGTGGATCCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTGGACACGTCTAAGAAC  180
V  92.6% (226/244)  IGHV4-34*09  139  ................A..........AG.................................T.....A.....A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  G  H  S  Y  G  S  G  S  Y 
                    Query_3575   181  CAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTTTTACTGCGCGAGAGGTCACTCCTATGGATCGGGGAGTTAT  270
V  92.6% (226/244)  IGHV4-34*09  229  ...............C...G...........................G.A......T.......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.5% (21/22)    IGHD3-10*01  7    -----------------------------------------------------------------------......T............  25

                                      ----------->                                  
                                       Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3575   271  TATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  95.5% (21/22)    IGHD3-10*01  26   ...-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_292373

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           388     5e-110
IGHD4-17*01                                                                                           18.0    0.68  
IGHJ6*04                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-17*01	IGHJ6*04	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGG	CTACGGTGA	GTCCGAGTAGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTCTGGACGTC	ARDLATVSPSSFYYGLDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_3576   2    CAGCTGGTGCAGTCTGGAGCCGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAT  91
V  92.8% (269/290)  IGHV1-18*01  7    ....................T..G.............................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  K  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_3576   92   GGTATTACCTGGGTGCGGCAGGCCCCTGGACAGGGACTTAAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  181
V  92.8% (269/290)  IGHV1-18*01  97   .....C.G.........A..............A..G...G.........................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  L  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  V  D  D  T  A 
                    Query_3576   182  ATGGTCCGGGACAGAGTCACCTTGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGAGTTGACGACACGGCC  271
V  92.8% (269/290)  IGHV1-18*01  187  .A.C...A..G..........A......C....................C..........C..............TC.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  S  F  Y  Y  G  L  D  V  W  G  K  G  T  T  V  T 
                    Query_3576   272  GTGTATTACTGTGCGAGAGATCTGGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTCTGGACGTCTGGGGAAAAGGGACCACGGTCACC  361
V  92.8% (269/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------.........--------------------------------------------------------  12
J  96.2% (51/53)    IGHJ6*04     11   -----------------------------------------------..........A.............C..................  53

                                                
                                       V  S  S  
                    Query_3576   362  GTCTCCTCAG  371
J  96.2% (51/53)    IGHJ6*04     54   ..........  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_307172

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           349     2e-98
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCGTGCTGTTA	ACTATGATAGTGGTG	ATTCCGGTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CGTGCTGTTAACTATGATAGTGGTGATTCCGGTTGGTACTTTGACTAC	RAVNYDSGDSGWYFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	241	113	108	5	0	95.6
Total	N/A	N/A	241	232	9	0	96.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3577   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACTTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.3% (232/241)  IGHV3-33*01  47   .....................................C.......G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  E  K  Y  Y  A  G  S  L  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3577   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTGAAAAATACTATGCAGGCTCCTTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.3% (232/241)  IGHV3-33*01  137  ................................A.T.............A....G....................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  R  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  R  A  V  N  Y  D  S  G  D  
                    Query_3577   181  AGCGCACACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGCCGTGCTGTTAACTATGATAGTGGTGATT  270
V  96.3% (232/241)  IGHV3-33*01  227  ..AA...G.....................................................-----------------------------  287
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                
D  93.3% (14/15)    IGHD3-22*01  6    ------------------------------------------------------------------------...........A...---  20

                                      T------------------>                                  
                                      S  G  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3577   271  CCGGTTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (46/46)   IGHJ4*02     3    --------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_307171

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD6-6*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTC	ATTREQLVPIFDF	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	269	18	0	93.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  L  S  S  Y
                    Query_3578   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATTTCCTGTAAGGGTTCTGGATACAGATTAAGCAGTTA  90
V  93.7% (269/287)  IGHV5-51*01  6    ......................................................C.......................C..T.C...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  E  T  K  Y  S  P
                    Query_3578   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCGTCTATCCTGGTGACTCTGAGACCAAATACAGCCC  180
V  93.7% (269/287)  IGHV5-51*01  96   C.......G..........................................G...A...................T....G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  A  S  G  T  A  F  L  Q  W  D  S  L  K  A  S  D  T  A
                    Query_3578   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGGCCAGCGGCACCGCCTTCCTGCAGTGGGACAGCCTGAAGGCCTCGGACACCGC  270
V  93.7% (269/287)  IGHV5-51*01  186  .......C.............................T...T.A.........A..........AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_3578   271  CATGTATTACTGTGCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  356
V  93.7% (269/287)  IGHV5-51*01  276  .................---------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------.......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_307170

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGGA	N/A	N/A	TCCCC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGATCCCCCTATTACGGTATGGACGTC	AGSPYYGMDV	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3579   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTACTGGATGCACTGGGTCCGCCAAGCTCCCGGGAAGGGGCTGG  90
V  96.4% (239/248)  IGHV3-74*01  47   ..............................................C.............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  F  S  D  V  T  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3579   91   TGTGGGTCTCACGTATTTTTAGTGATGTGACTAGCACAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (239/248)  IGHV3-74*01  137  .................AA........G..G...........................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  G  S  P  Y  Y  G  M  D  
                    Query_3579   181  GGAACACCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAGGATCCCCCTATTACGGTATGGACG  270
V  96.4% (239/248)  IGHV3-74*01  227  A......G.........................................................A..----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  96.2% (50/52)    IGHJ6*02     11   -------------------------------------------------------------------------...C.............  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_3579   271  TCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  305
J  96.2% (50/52)    IGHJ6*02     28   ........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_292378

Length=410
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           392     2e-111
IGHD1-26*01                                                                                           23.8    0.013 
IGHJ6*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGTCTTATGTCCCG	GTGGGAGCTACT	CCCTTAGAAGGGGCCGAGGACA	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGTCTTATGTCCCGGTGGGAGCTACTCCCTTAGAAGGGGCCGAGGACAACGGTATGGACGTC	ARDGSYVPVGATPLEGAEDNGMDV	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  S  F  T  N  H
                    Query_3580   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTTTCCTGCAAGGCGTCTGGATACAGCTTCACCAATCA  90
V  93.1% (271/291)  IGHV1-46*01  6    ..................G...............................A...............A..........C........GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  H  A  Q
                    Query_3580   91   CTATGTGCACTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGTCACGCACA  180
V  93.1% (271/291)  IGHV1-46*01  96   ....A...............................G............................................CT.......  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  M  S  T  T  T  V  Y  M  E  L  R  S  L  R  S  E  D  T  A
                    Query_3580   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACATGTCCACAACCACAGTGTACATGGAACTACGTAGCCTGAGATCTGAGGACACGGC  270
V  93.1% (271/291)  IGHV1-46*01  186  ...................................C......G.G......C........G..GA.C.......................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------------CDR3-IMGT------------------------------>     
                                        V  Y  Y  C  A  R  D  G  S  Y  V  P  V  G  A  T  P  L  E  G  A  E  D  N  G  M  D  V  W  G
                    Query_3580   271  CGTGTACTACTGTGCGAGAGATGGGTCTTATGTCCCGGTGGGAGCTACTCCCTTAGAAGGGGCCGAGGACAACGGTATGGACGTCTGGGG  360
V  93.1% (271/291)  IGHV1-46*01  276  ......T..............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD1-26*01  7    -------------------------------------............-----------------------------------------  18
J  100.0% (47/47)   IGHJ6*02     16   -----------------------------------------------------------------------...................  34

                                                                  
                                        Q  G  T  T  V  T  V  S  S 
                    Query_3580   361  CCAAGGGACCACGGTCACCGTCTCCTCA  388
J  100.0% (47/47)   IGHJ6*02     35   ............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40183344


Query= Query_64389

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           422     2e-120
IGHD2-8*02                                                                                            14.1    9.7   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GTGAGGATTTCTTTGATG	CTGGTGG	GTCCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGAGGATTTCTTTGATGCTGGTGGGTCCCACTACTACGGCTTGGACGTC	ARREDFFDAGGSHYYGLDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  N  L  A  A  F
                    Query_3581   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAACTTAGCCGCCTT  90
V  96.6% (280/290)  IGHV5-51*01  6    .............................................................................G...TA..AG..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_3581   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCCGGTGACTCTGATACCAGATACAGCCC  180
V  96.6% (280/290)  IGHV5-51*01  96   ...............................................................T..........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  A  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  R  A  S  D  T  A
                    Query_3581   181  GTCCTTCCAAGGCCAGGTCGCCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACACCGC  270
V  96.6% (280/290)  IGHV5-51*01  186  ...................A....C.................................................A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  R  E  D  F  F  D  A  G  G  S  H  Y  Y  G  L  D  V  W  G  Q  G  T  T  V
                    Query_3581   271  CATGTATTACTGTGCGAGACGTGAGGATTTCTTTGATGCTGGTGGGTCCCACTACTACGGCTTGGACGTCTGGGGCCAAGGGACCACGGT  360
V  96.6% (280/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-8*02   12   --------------------------------------.......---------------------------------------------  18
J  94.3% (50/53)    IGHJ6*02     10   --------------------------------------------------..........TA............................  49

                                                   
                                        T  V  S  S 
                    Query_3581   361  CACCGTCTCTTCA  373
J  94.3% (50/53)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_307175

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           332     4e-93
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AC	ATTACGATTTTTCGAGTGGT	CTCATTATCGGAAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACATTACGATTTTTCGAGTGGTCTCATTATCGGAACTGACTAC	AREHYDFSSGLIIGTDY	246	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  R  G  S  Y  Y  W  S  W  N  R  Q  S  P  G  K  G  
                    Query_3582   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCGTCAGTAGAGGTTCTTACTACTGGAGTTGGAACCGGCAGTCCCCAGGGAAGGGAC  93
V  92.4% (231/250)  IGHV4-61*01  50   .....TCC...A............................C..T...AG............C....T.......C...............  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  H  S  G  S  T  N  Y  H  P  S  L  K  S  R  V  T  I  S  I  D  T  S  
                    Query_3582   94   TGGAGTGGATTGGGTATATTTATCACAGTGGGAGCACCAACTATCACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCA  183
V  92.4% (231/250)  IGHV4-61*01  140  ...................C...T...................CA................................G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  H  Y  D  F  S  S  
                    Query_3582   184  AGAACCAGTTCTCCCTGAAGCTGAATTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGAACATTACGATTTTTCGAGTG  273
V  92.4% (231/250)  IGHV4-61*01  230  ........................GC..........................G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  95.0% (19/20)    IGHD3-3*01   3    ------------------------------------------------------------------------............G.....  20

                                      GT-------------------->                                  
                                      G  L  I  I  G  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3582   274  GTCTCATTATCGGAACTGACTACTGGGGCCAGGGTACCCTGGTCACCGTCTCCTCAG  330
D  95.0% (19/20)    IGHD3-3*01   21   ..-------------------------------------------------------  22
J  97.6% (40/41)    IGHJ4*02     8    ----------------..................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_72177

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           310     1e-86
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	N/A	TCATCCTTCCG	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATCCTTCCGACTATGGTTTGGGCGTC	AKDHPSDYGLGV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  D  F  G  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3583   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCAACTTCAGCGACTTTGGCTTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGC  90
V  89.6% (224/250)  IGHV3-30*18  47   ...............................A....C......TAG..A....A...................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      H  W  L  A  V  I  S  Y  D  G  S  I  R  H  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3583   91   ACTGGCTGGCAGTTATATCATATGATGGATCTATTAGACACTATGCAAACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  89.6% (224/250)  IGHV3-30*18  137  .G...G.......................AG..A..A.T........G..........................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  L  K  G  L  T  T  E  D  T  A  M  Y  Y  C  A  K  D  H  P  S  D  Y  G  
                    Query_3583   181  AGAACACGTTGTATCTTCAATTGAAGGGACTTACAACTGAGGACACGGCTATGTATTACTGTGCGAAAGATCATCCTTCCGACTATGGTT  270
V  89.6% (224/250)  IGHV3-30*18  227  ........C.......G...A....CA.C..G.G.G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
J  89.8% (44/49)    IGHJ6*02     13   ---------------------------------------------------------------------------------....C...A  21

                                      ------->                                
                                      L  G  V  W  G  Q  G  T  T  V  I  V  S  S
                    Query_3583   271  TGGGCGTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTC  310
J  89.8% (44/49)    IGHJ6*02     22   ...A............A.............C.........  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_38597

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            405     4e-115
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACATAC	TACTACGATAGTCGTGGTTAT	CGATCGTGGGTCCCCCG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACATACTACTACGATAGTCGTGGTTATCGATCGTGGGTCCCCCGCTTTGACTCC	ARTYYYDSRGYRSWVPRFDS	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  S  Y
                    Query_3584   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCGGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCAGCAGTTA  90
V  94.8% (274/289)  IGHV1-8*01   6    ..................G.................T..............................................C......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  F  M  N  P  N  S  G  N  T  G  S  A  Q
                    Query_3584   91   TGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGCCTTGAGTGGATGGGATTTATGAACCCAAACAGTGGTAACACAGGCTCTGCACA  180
V  94.8% (274/289)  IGHV1-8*01   96   .........................A..........G................GG........T...................A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  M  T  R  N  T  S  I  N  T  A  Y  M  E  L  S  S  L  T  S  D  D  T  A
                    Query_3584   181  GAGGTTCCAGGGCAGAGTCACCATGACCAGAAATACCTCCATAAACACAGCCTACATGGAGCTGAGCAGCCTGACATCTGACGACACGGC  270
V  94.8% (274/289)  IGHV1-8*01   186  ..A...........................G..C..........G.............................G......G........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        V  Y  Y  C  A  R  T  Y  Y  Y  D  S  R  G  Y  R  S  W  V  P  R  F  D  S  W  G  Q  G  T  L
                    Query_3584   271  CGTGTATTACTGTGCGAGAACATACTACTACGATAGTCGTGGTTATCGATCGTGGGTCCCCCGCTTTGACTCCTGGGGCCAGGGAACCCT  360
V  94.8% (274/289)  IGHV1-8*01   276  ...................-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  90.5% (19/21)    IGHD3-22*01  5    -------------------------.....T......A........--------------------------------------------  25
J  97.7% (43/44)    IGHJ4*02     5    ---------------------------------------------------------------........A..................  31

                                                       
                                        V  T  V  S  S  
                    Query_3584   361  GGTCACCGTCTCCTCAG  377
J  97.7% (43/44)    IGHJ4*02     32   .................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_72175

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            392     2e-111
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ3*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGC	TTACTACGATAGTAGTGGTTA	CCACAGGGTTC	CTTGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCTTACTACGATAGTAGTGGTTACCACAGGGTTCCTTGTGACATC	ARGAYYDSSGYHRVPCDI	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_3585   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTA  90
V  93.1% (271/291)  IGHV1-8*01   6    ..................G...............................A.......................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  T  W  M  N  P  I  S  G  N  T  G  Y  A  Q
                    Query_3585   91   TGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGACGTGGATGAACCCTATCAGTGGTAACACAGGCTATGCACA  180
V  93.1% (271/291)  IGHV1-8*01   96   .........................A.......................GGA.............A........................  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  Q  G  R  L  T  M  T  K  N  T  S  I  S  T  A  Y  M  E  L  Y  N  L  T  P  D  D  T  A
                    Query_3585   181  GAACTTCCAGGGCCGACTCACGATGACCAAGAACACCTCCATAAGCACAGCCTACATGGAGCTGTACAACCTGACACCTGACGACACGGC  270
V  93.1% (271/291)  IGHV1-8*01   186  ...G.........A..G....C.......G..................................AG..G.....G.T....G........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  G  A  Y  Y  D  S  S  G  Y  H  R  V  P  C  D  I  W  G  Q  G  T  V  V  S
                    Query_3585   271  CGTGTACTATTGTGCGAGAGGGGCTTACTACGATAGTAGTGGTTACCACAGGGTTCCTTGTGACATCTGGGGCCAAGGGACAGTGGTCTC  360
V  93.1% (271/291)  IGHV1-8*01   276  ......T..C...........---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R  G                                                                     
D  95.2% (20/21)    IGHD3-22*01  4    ------------------------......T..............---------------------------------------------  24
J  91.1% (41/45)    IGHJ3*02     6    --------------------------------------------------------...T...T..................A.....A.  39

                                                 
                                        V  S  S  
                    Query_3585   361  CGTCTCTTCAG  371
J  91.1% (41/45)    IGHJ3*02     40   ...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_72174

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     2e-91
IGHD3-10*01                                                                                           14.1    7.9  
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCCC	TCGGGGA	ATT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCCCTCGGGGAATTTGCTTTTGATATC	AKPLGEFAFDI	235	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	19	21	3	3	0	0	100
CDR1-IMGT	22	45	24	24	0	0	100
FR2-IMGT	46	96	51	48	3	0	94.1
CDR2-IMGT	97	120	24	22	2	0	91.7
FR3-IMGT	121	234	114	112	2	0	98.2
CDR3-IMGT (germline)	235	240	6	6	0	0	100
Total	N/A	N/A	222	215	7	0	96.8


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  N  I  N  G  G 
                    Query_3586   19   TCTGGATTCACCTTTAGCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAAATATTAATGGTGGT  108
V  96.8% (215/222)  IGHV3-23*01  73   ...............................G...........................................GC.....G....A..  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 
                    Query_3586   109  GGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAAC  198
V  96.8% (215/222)  IGHV3-23*01  163  ..........................................................................................  252
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><-----------CDR3-IMGT----------->                     
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  L  G  E  F  A  F  D  I  W  G  Q  G  T  M  V 
                    Query_3586   199  AGCCTGAGGGCCGAGGACACGGCCGTTTATTACTGTGCGAAACCCCTCGGGGAATTTGCTTTTGATATCTGGGGCCAAGGGACAATGGTC  288
V  96.8% (215/222)  IGHV3-23*01  253  ........A.................A...............------------------------------------------------  294
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  100.0% (7/7)     IGHD3-10*01  14   ----------------------------------------------.......-------------------------------------  20
J  100.0% (47/47)   IGHJ3*02     4    --------------------------------------------------------..................................  37

                                                   
                                       T  V  S  S  
                    Query_3586   289  ACCGTCTCTTCAG  301
J  100.0% (47/47)   IGHJ3*02     38   .............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_72173

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           358     4e-101
IGHD3-22*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGC	ATTATTATGATAGTAGTGGTTATTA	TGTCAGAGTCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCGGCATTATTATGATAGTAGTGGTTATTATGTCAGAGTCCCTTTTGACAAC	VRDRHYYDSSGYYVRVPFDN	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	131	27	22	2	3	81.5
FR3-IMGT	132	245	114	113	1	0	99.1
CDR3-IMGT (germline)	246	253	8	7	1	0	87.5
Total	N/A	N/A	253	243	7	3	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  V  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3587   1    GGTCCCTGAGACTCTCCTGTGAAGTCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (243/253)  IGHV3-48*03  47   .....................C..C.................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><--------CDR2-IMGT--------><------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  T  T  T  I  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  
                    Query_3587   91   AGTGGGTTTCATATATTAGTAGTAGTGGTACTACTACAATATTCTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACG  180
V  96.0% (243/253)  IGHV3-48*03  137  .............C................G...C.---...A...............................................  223
                                      E  W  V  S  Y  I  S  S  S  G  S  T     I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  

                                      ----FR3-IMGT----------------------------------------------------><------------------------
                                      A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  R  H  Y  Y  D  
                    Query_3587   181  CCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGTGAGAGATCGGCATTATTATGATA  270
V  96.0% (243/253)  IGHV3-48*03  224  ..................................................................C......-----------------  296
                                      A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                    
D  96.0% (24/25)    IGHD3-22*01  3    ------------------------------------------------------------------------------....C.......  14

                                      -CDR3-IMGT------------------------>                                  
                                      S  S  G  Y  Y  V  R  V  P  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3587   271  GTAGTGGTTATTATGTCAGAGTCCCTTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  96.0% (24/25)    IGHD3-22*01  15   .............--------------------------------------------------------  27
J  97.7% (42/43)    IGHJ4*02     6    --------------------------......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_72172

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*02                                                                                            374     8e-106
IGHD1-26*01                                                                                           14.1    9.0   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*02	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	CAGCCTTGACGG	AGTGGGA	ACTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGACCAGCCTTGACGGAGTGGGAACTTTACTTTGACTAC	AHRPALTEWELYFDY	267	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	50	45	41	4	0	91.1
CDR1-IMGT	51	80	30	30	0	0	100
FR2-IMGT	81	131	51	48	3	0	94.1
CDR2-IMGT	132	152	21	21	0	0	100
FR3-IMGT	153	266	114	105	9	0	92.1
CDR3-IMGT (germline)	267	276	10	10	0	0	100
Total	N/A	N/A	271	255	16	0	94.1


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  S  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  V  R 
                    Query_3588   6    CTGGTGAAGCCCTCACAGACCCTCACACTGACCTGCACGTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGGTCCGT  95
V  94.1% (255/271)  IGHV2-5*02   31   ........A...A.............G...........C.............................................A.....  120
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R 

                                      ------FR2-IMGT---------------------><-----CDR2-IMGT-----><--------------------------------
                                       Q  S  P  G  R  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  L  T 
                    Query_3588   96   CAGTCCCCAGGAAGGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGTTACAGCCCATCTCTGAAGAGCAGACTCACC  185
V  94.1% (255/271)  IGHV2-5*02   121  ...C.........A.............................................C.......................G......  210
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  L  T 

                                      --------------------FR3-IMGT----------------------------------------------------><--------
                                       I  T  K  D  T  N  K  N  Q  V  I  L  K  M  T  N  M  E  P  V  D  T  A  T  Y  Y  C  A  H  R 
                    Query_3588   186  ATCACCAAGGACACTAACAAAAACCAGGTGATCCTTAAAATGACCAACATGGAGCCTGTGGACACAGCCACATACTACTGTGCACACAGA  275
V  94.1% (255/271)  IGHV2-5*02   211  ..............CTC.............G......C...............C....................T...............  300
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  R 

                                      ---------CDR3-IMGT----------------->                                
                                       P  A  L  T  E  W  E  L  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3588   276  CCAGCCTTGACGGAGTGGGAACTTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  343
V  94.1% (255/271)  IGHV2-5*02   301  .-------------------------------------------------------------------  301
                                                                                                          
D  100.0% (7/7)     IGHD1-26*01  6    -------------.......------------------------------------------------  12
J  100.0% (44/44)   IGHJ4*02     3    ------------------------............................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_72171

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         399     3e-113
IGHD5-12*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCACAG	TAGTGGCCACG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCACAGTAGTGGCCACGACTACTTTGACTAC	ARLHSSGHDYFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  R  I  S  C  E  G  S  G  Y  T  F  A  T  Y
                    Query_3589     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGCAGTCTCTGAGGATCTCCTGTGAGGGTTCTGGATACACCTTCGCCACCTA  90
V  94.1% (272/289)  IGHV5-10-1*01  6    ........................................G....................A...............G...TA...G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  K  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_3589     91   TTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAAGATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  94.1% (272/289)  IGHV5-10-1*01  96   C..................................................G.G....................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  T  D  N  S  I  T  T  A  Y  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_3589     181  GTCCTTCCAAGGCCACGTCACCATCTCAACTGACAATTCCATCACCACTGCCTACCTGCAGTGGAACAGTCTGAAGGCCTCGGACACAGC  270
V  94.1% (272/289)  IGHV5-10-1*01  186  ............................G.......G.......G....................G...C.................C..  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          M  Y  Y  C  A  R  L  H  S  S  G  H  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3589     271  CATGTATTATTGCGCGAGACTTCACAGTAGTGGCCACGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  94.1% (272/289)  IGHV5-10-1*01  276  .........C..T......-------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                    
D  90.9% (10/11)    IGHD5-12*01    8    ---------------------------.......T...------------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02       1    --------------------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_33027

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           325     3e-91
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_3590   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  92.6% (226/244)  IGHV4-59*01  49   ...............................G........G.................................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_3590   91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  92.6% (226/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y 
                    Query_3590   181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTAC  270
V  92.6% (226/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD2-2*01   8    ---------------------------------------------------------------------........T........----  24
J  88.5% (46/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_3590   271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  318
J  88.5% (46/52)    IGHJ6*02     15   ...GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_346048

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           18.0    0.60 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_3591   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  91.4% (223/244)  IGHV4-59*01  50   .....TCC...A..................G........G.AG..A......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S  
                    Query_3591   94   GGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGCC  183
V  91.4% (223/244)  IGHV4-59*01  140  .......G......T..........G.GC.............................A.T......A...................A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F  
                    Query_3591   184  AGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACGCGGCCGTGTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTTG  273
V  91.4% (223/244)  IGHV4-59*01  230  ..................G...................A.........................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------------------------.......C.G..A..  15

                                      ------------------->                                  
                                      G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3591   274  GTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  83.3% (15/18)    IGHD5-18*01  16   ...---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    -----.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_346049

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_3592   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_3592   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  R  K  A  P  D  T  A
                    Query_3592   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCGGAAGGCCCCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .......C.....................................C...........G......A......T.......T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_3592   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_3592   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_167720

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           344     6e-97
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_3593   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.4% (234/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_3593   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.4% (234/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  D  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_3593   181  AAGGACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.4% (234/248)  IGHV4-39*01  229  ...A..............A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_3593   271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_292734

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*05                                                                                           269     2e-74
IGHD2-21*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*05	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CGCTAT	TATTTTGGTGG	CTTTGGGCC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACGCTATTATTTTGGTGGCTTTGGGCCCTACGGGATGGACGTC	AKRYYFGGFGPYGMDV	234	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	44	24	14	1	9	58.3
FR2-IMGT	45	95	51	47	4	0	92.2
CDR2-IMGT	96	119	24	14	10	0	58.3
FR3-IMGT	120	233	114	102	12	0	89.5
CDR3-IMGT (germline)	234	239	6	6	0	0	100
Total	N/A	N/A	248	212	27	9	85.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F           S  D  A  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3594   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCA---------GCGATGCCATCAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  81
V  85.5% (212/248)  IGHV3-23*05  47   ....................................CCTTTAGCA..T.......G..C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  T  S  G  S  A  R  Y  Y  S  D  S  V  K  G  R  F  T  I  A  R  D  N  S  
                    Query_3594   82   AATGGGTCTCAGCGATTAGTACAAGTGGAAGTGCTAGGTACTATTCAGACTCCGTGAAGGGCCGGTTCACCATCGCCAGAGACAATTCCA  171
V  85.5% (212/248)  IGHV3-23*05  137  .G...........T...TA..GC.....T...AGC.CA......G.............................T...............  226
                                      E  W  V  S  A  I  Y  S  S  G  S  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  V  Y  L  Q  I  L  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  R  Y  Y  F  G  G  F  
                    Query_3594   172  AGAATACGGTCTATCTGCAGATATTGAGTTTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAACGCTATTATTTTGGTGGCTTTG  261
V  85.5% (212/248)  IGHV3-23*05  227  ....C...C.G........A..GAAC..CC......................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.9% (10/11)    IGHD2-21*01  5    --------------------------------------------------------------------------....G......-----  15

                                      T------------------>                                 
                                      G  P  Y  G  M  D  V  W  G  H  G  V  T  V  I  V  S  S 
                    Query_3594   262  GGCCCTACGGGATGGACGTCTGGGGCCACGGGGTCACAGTCATCGTATCCTCA  314
J  85.7% (42/49)    IGHJ6*02     14   ----......T.................A...AC...G....C...C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_352233

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ3*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTTCAGAGGCACTT	CTATGACACTGGTGGTTAT	GGGGTC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTTCAGAGGCACTTCTATGACACTGGTGGTTATGGGGTCGATGCTTTTGATGCC	AKDLQRHFYDTGGYGVDAFDA	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3595   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.8% (227/250)  IGHV3-23*01  47   ..........................................G..............G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  L  D  G  S  G  H  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3595   91   AGTGGGTCTCAGCACTTGATGGCAGTGGTCATAAGACATACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAATTCCA  180
V  90.8% (227/250)  IGHV3-23*01  137  .............TA..AG...T......GG..GC.............................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  V  Y  L  Q  L  D  S  L  G  V  E  D  T  A  L  Y  Y  C  A  K  D  L  Q  R  H  F  Y  
                    Query_3595   181  AGAACACAGTGTACCTGCAATTAGATAGCCTGGGAGTCGAGGACACGGCCTTATATTACTGTGCGAAAGATCTTCAGAGGCACTTCTATG  270
V  90.8% (227/250)  IGHV3-23*01  227  .......GC....T......A.GA.C......A...C.............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  84.2% (16/19)    IGHD3-22*01  7    -------------------------------------------------------------------------------------.....  11

                                      DR3-IMGT-------------------------->                                  
                                      D  T  G  G  Y  G  V  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3595   271  ACACTGGTGGTTATGGGGTCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTGACAGTCTCTTCAG  339
D  84.2% (16/19)    IGHD3-22*01  12   .T.G.A........-------------------------------------------------------  25
J  93.9% (46/49)    IGHJ3*01     2    --------------------.............T.....................C..C..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_352230

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3596   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3596   91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*01  139  ........GT........T.......G...............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_3596   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.5% (234/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3596   271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_38594

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-3*01                                                                                            10.3    123   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCTC	TTTTT	CTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTTTTTCTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFLQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  K  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3597   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAAGAGTGGTGGCTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (239/248)  IGHV4-31*03  49   ..................................C.....GC........T.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  A  T  S 
                    Query_3597   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGCCACGTCT  180
V  96.4% (239/248)  IGHV4-31*03  139  ..................................G.............C......................C........A.A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  L  Q  E 
                    Query_3597   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTTCTCTTTTTCTCCAAGAA  270
V  96.4% (239/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD3-3*01   10   ----------------------------------------------------------------------------.....---------  14

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3597   271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_352236

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           361     4e-102
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TGGACTTCAGTC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGACTTCAGTCCTTTGACTAC	ARDGLQSFDY	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	241	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  L  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3598   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGTAGTGGTGGTTATCTCTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (241/251)  IGHV4-31*03  49   ..................A......................C...........CTA..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  E  T  S 
                    Query_3598   91   CTGGAGTGGATTGGTTACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTTACCATATCACTAGAGACGTCT  180
V  96.0% (241/251)  IGHV4-31*03  139  ..............G.......A...................................A...................G....C......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  L  Q  S  F  D 
                    Query_3598   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGGACTTCAGTCCTTTGAC  270
V  96.0% (241/251)  IGHV4-31*03  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  100.0% (44/44)   IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3598   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (44/44)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_352237

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           413     2e-117
IGHD3-16*01                                                                                           12.2    36    
IGHJ6*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGA	AATTGGTAACACCTAATTGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTC	ARRGKLVTPNWDYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	276	12	0	95.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_3599   2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAC  91
V  95.8% (276/288)  IGHV1-18*04  7    ...................C.................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  C  Y  N  G  N  T  K  C  A  L 
                    Query_3599   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGTTGTTACAATGGTAACACAAAGTGTGCACTG  181
V  95.8% (276/288)  IGHV1-18*04  97   ...........................................................CGC..................C.A.....A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  H  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  S  A 
                    Query_3599   182  AAGCACCAGGGCAGAGTCACCATGACCACAGACACATCGACGAGCACAGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGACTCGGCC  271
V  95.8% (276/288)  IGHV1-18*04  187  ....T.................................C..............C..............................A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------CDR3-IMGT-------------------->                           
                                       V  Y  Y  C  A  R  R  G  K  L  V  T  P  N  W  D  Y  G  M  D  V  W  G  Q  G  T  T  V  S  V 
                    Query_3599   272  GTGTATTACTGTGCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCTCCGTC  361
V  95.8% (276/288)  IGHV1-18*04  277  ..................------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD3-16*01  18   -------------------......-----------------------------------------------------------------  23
J  98.0% (49/50)    IGHJ6*02     13   ----------------------------------------------......................................A.....  56

                                            
                                       S  S 
                    Query_3599   362  TCCTCA  367
J  98.0% (49/50)    IGHJ6*02     57   ......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_352234

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            350     8e-99
IGHD4-17*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AC	ACGGTGACTAC	CGATTC	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAACACGGTGACTACCGATTCTACTACTATTACTACGGACTGGACGTC	VREHGDYRFYYYYYGLDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  A  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3600   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTTAGTGCCTATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-7*03   47   ....................G.......................AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  D  I  K  Q  D  G  N  E  K  H  Y  V  G  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3600   91   AATGGGTGGCCGACATAAAACAAGATGGAAATGAGAAACACTATGTGGGCTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (237/250)  IGHV3-7*03   137  .G.........A.......G..........G.......T.........A...............A.........................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  E  H  G  D  Y  R  F  
                    Query_3600   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGTGAGAGAACACGGTGACTACCGATTCT  270
V  94.8% (237/250)  IGHV3-7*03   227  ....................................................G..........C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD4-17*01  6    ------------------------------------------------------------------------...........-------  16
J  95.0% (57/60)    IGHJ6*02     3    -----------------------------------------------------------------------------------------.  3

                                      IMGT--------------------->                                 
                                      Y  Y  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3600   271  ACTACTATTACTACGGACTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  95.0% (57/60)    IGHJ6*02     4    .......C........TA.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_352235

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           294     6e-82
IGHD3-3*02                                                                                            18.0    0.58 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGTCT	CATTTATGGATCGGTTAT	GACCC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGTCTCATTTATGGATCGGTTATGACCCACTTCGACAAC	ARLIYGSVMTHFDN	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	217	29	0	88.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  I  N  N  D  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_3601   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCATCAATAATGATTACTATTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGT  90
V  88.2% (217/246)  IGHV4-39*01  49   ...................C...........G........G..G..G.AG......C................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  N  I  Y  H  N  G  D  T  L  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3601   91   CTGGAGTGGATCGCCAACATCTATCATAATGGGGACACCCTCTACAATCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACATCC  180
V  88.2% (217/246)  IGHV4-39*01  139  ...........T.GG.GT......T...G....AG....TA......C.............................C........G...  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       T  D  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  I  Y  G  S  V  M 
                    Query_3601   181  ACGGATCAGTTTTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGCGTCTCATTTATGGATCGGTTATG  270
V  88.2% (217/246)  IGHV4-39*01  229  .A.A.C.....C.......A......C.......................................------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  83.3% (15/18)    IGHD3-3*02   8    -----------------------------------------------------------------------.....T....GT......-  25

                                      -------------->                                  
                                       T  H  F  D  N  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_3601   271  ACCCACTTCGACAACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  319
J  93.3% (42/45)    IGHJ4*02     4    ----....T...T........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_352238

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           296     2e-82
IGHD7-27*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GCCCG	AACTGGGGA	CCCCTTTATTTTACTC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGGCCCGAACTGGGGACCCCTTTATTTTACTCAC	TTGPNWGPLYFTH	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	126	30	16	6	8	53.3
FR3-IMGT	127	239	114	104	9	1	91.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	255	224	22	9	87.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  D  D  A  W  M  S  W  V  R  Q  A  P  G  Q  G  L  
                    Query_3602   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCGTTTCGATGACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGCAGGGGCTGG  90
V  87.8% (224/255)  IGHV3-15*01  47   .......T...........................AC....AG.A...................................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  T  Q  S  H  T  D  V           D  Y  A  A  P  V  R  G  S  F  T  I  S  R  D  
                    Query_3602   91   AGTGGGTTGGCCGTACTCAAAGTCACACTGATGTTG---------ACTATGCTGCGCCCGTGAGAGGCAGTTTTACCATCTCAAGAGATG  171
V  87.8% (224/255)  IGHV3-15*01  137  ...............T.A....CA.A.......G..GGACAACAG....C.....A.......A......A..C................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      D  S  R  K  M  V  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  G  P  N  W  G  
                    Query_3602   172  ATTCAAGAAAAATGGTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGGCCCGAACTGGGGAC  261
V  87.8% (224/255)  IGHV3-15*01  227  ......A...C.C.C............................................................---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (9/9)     IGHD7-27*01  3    --------------------------------------------------------------------------------.........-  11

                                      GT-------------->                                  
                                      P  L  Y  F  T  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_3602   262  CCCTTTATTTTACTCACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  312
J  97.2% (35/36)    IGHJ4*02     13   ---------------..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_352239

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           329     3e-92
IGHD3-3*01                                                                                            29.5    2e-04
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTGATACAGTCTTT	CGATTTTTGGAGTGG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTGATACAGTCTTTCGATTTTTGGAGTGGCTACTTCGACTAC	AKDLIQSFDFWSGYFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3603   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTTACTATGGCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-30*18  47   .....................................C......AG.........G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  V  N  D  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  D  
                    Query_3603   91   AGTGGGTGGCAGTTATTTCATATGATGGAGTTAATGACCACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGACA  180
V  92.0% (230/250)  IGHV3-30*18  137  ................A............AG....A.AT...............................................TC..  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  K  V  F  L  Q  M  N  S  L  R  V  E  D  T  A  T  Y  Y  C  A  K  D  L  I  Q  S  F  D  
                    Query_3603   181  AGAACAAGGTGTTTCTGCAAATGAACAGCCTGAGAGTTGAGGACACAGCTACTTATTACTGTGCGAAAGATCTGATACAGTCTTTCGATT  270
V  92.0% (230/250)  IGHV3-30*18  227  ......C.C...A.......................C.........G...GTG.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD3-3*01   7    -------------------------------------------------------------------------------------.....  11

                                      GT-------------------->                                  
                                      F  W  S  G  Y  F  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3603   271  TTTGGAGTGGCTACTTCGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (15/15)   IGHD3-3*01   12   ..........-----------------------------------------------  21
J  95.7% (45/47)    IGHJ4*02     2    ----------......T.............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_52618

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            339     2e-95
IGHD4-17*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	ARPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_3604   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  94.3% (231/245)  IGHV4-4*02   49   ...................C........................T..T..........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  R  S  E 
                    Query_3604   91   GAGTGGATTGGGGAGATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCAAGTCTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.3% (231/245)  IGHV4-4*02   139  ..............A....A..A..............A...................AG............A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  M  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  K  Y  G  V  F  G  L 
                    Query_3604   181  AACCAGTTCTCCCTGATGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.3% (231/245)  IGHV4-4*02   229  ................A.....G..........................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3604   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_52619

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCATAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCATAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAIVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3605   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3605   91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  I  V  V  Q  
                    Query_3605   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCATAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3605   271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_167727

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           291     5e-81
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	213	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_3606   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  88.8% (213/240)  IGHV4-59*01  49   ..................A......................T.GT.A...C....G.............C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R 
                    Query_3606   91   TGGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGA  180
V  88.8% (213/240)  IGHV4-59*01  139  .......GG.....C.ATT................C..C...........C.....................G.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G 
                    Query_3606   181  CACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGT  270
V  88.8% (213/240)  IGHV4-59*01  229  ..G...........G....G............T..............G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-22*01  7    -----------------------------------------------------------------------------..........A..  19

                                      ----------------------->                                  
                                       G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3606   271  GGCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCATCAG  328
D  93.3% (14/15)    IGHD3-22*01  20   ..--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    --------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_317374

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAA	TACGGTTTTTGGAGTGGTTA	ACCA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCAATACGGTTTTTGGAGTGGTTAACCATGACTAC	ASNTVFGVVNHDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	232	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  Y  S  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3607   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTACAGTGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.9% (232/242)  IGHV4-34*01  49   .....................................T.....G..............................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  Y  G  R  T  N  F  N  P  S  L  E  S  R  V  T  I  L  V  D  A  T  K  N 
                    Query_3607   91   TGGATTGGGGAAATCAATCATTATGGAAGAACCAACTTCAACCCGTCCCTCGAGAGTCGAGTCACCATATTAGTAGACGCGACCAAGAAC  180
V  95.9% (232/242)  IGHV4-34*01  139  .....................AG......C.......A.............A..................C.......A..T........  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  N  T  V  F  G  V  V  N  H 
                    Query_3607   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGCAATACGGTTTTTGGAGTGGTTAACCAT  270
V  95.9% (232/242)  IGHV4-34*01  229  ..............................................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.0% (19/20)    IGHD3-3*01   5    -----------------------------------------------------------------....A...............-----  24
J  100.0% (41/41)   IGHJ4*02     8    -----------------------------------------------------------------------------------------.  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3607   271  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (41/41)   IGHJ4*02     9    ........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_317376

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     7e-98
IGHD3-22*01                                                                                           25.7    0.003
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGC	AGTAGTGGTTATT	GG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTCGACCCC	ARGGSSGYWWFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	233	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3608   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTATTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (233/244)  IGHV4-59*01  49   ...............................G..........A....C.......G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  F  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  K  S 
                    Query_3608   91   TGGATTGGGTTTATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGGGTCGAGTCACCATATCAGTAGACACGTCCAAGAGC  180
V  95.5% (233/244)  IGHV4-59*01  139  ..........A.........C.................................A.................................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  S  S  G  Y  W  W  F 
                    Query_3608   181  CAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTC  270
V  95.5% (233/244)  IGHV4-59*01  229  ...............C...G.................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD3-22*01  14   ---------------------------------------------------------------------.............--------  26
J  93.5% (43/46)    IGHJ5*02     6    ------------------------------------------------------------------------------------......  11

                                      ----->                                  
                                       D  P  W  G  Q  A  I  P  V  T  V  S  S  
                    Query_3608   271  GACCCCTGGGGCCAGGCAATCCCGGTCACCGTCTCCTCAG  310
J  93.5% (43/46)    IGHJ5*02     12   ................G..C..T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_317370

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            308     4e-86
IGHD4-4*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-4*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGCTTCTGGAGA	TGACTACA	ATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGCTTCTGGAGATGACTACAATCTTGACTCC	ARVASGDDYNLDS	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	223	26	0	89.6


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3609  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAAGTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.6% (223/249)  IGHV3-7*03  47   ...........................................T.GC...TGG.....C...............................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  Y  I  N  H  D  S  T  E  K  Y  Y  V  E  S  L  R  G  *  L  T  I  S  R  D  N  A  
                    Query_3609  91   AGTGGGTGGCCTACATAAACCATGATTCAACTGAGAAGTACTATGTGGAGTCATTGAGGGGCTGACTCACCATCTCCAGAGACAACGCCA  180
V  89.6% (223/249)  IGHV3-7*03  137  ...........A.......G..A...GG..G......A...........C..TG...A....C..T........................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                     K  N  S  L  F  L  Q  M  E  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  A  S  G  D  D  Y  
                    Query_3609  181  AGAACTCACTGTTTCTCCAAATGGAGAGCCTGAGAGCCGACGACACGGCCGTTTATTACTGTGCGAGAGTCGCTTCTGGAGATGACTACA  270
V  89.6% (223/249)  IGHV3-7*03  227  ............A...G......A.C..............G...........G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD4-4*01  1    ----------------------------------------------------------------------------------........  8

                                     ---------->                                  
                                     N  L  D  S  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_3609  271  ATCTTGACTCCTGGGGCCAGGGTACCCTGGTCTCCGTCTCCTCAG  315
J  92.9% (39/42)    IGHJ4*02    7    ---......A............A.........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_317372

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           392     2e-111
IGHD2-15*01                                                                                           10.3    134   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	CGCA	GTAGC	GAAGGCTATCTTGTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACGCAGTAGCGAAGGCTATCTTGTCCTTGACTAC	VRRSSEGYLVLDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  T  T  S  G  Y  S  F  A  T  H
                    Query_3610   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTACGACTTCTGGATATAGTTTTGCCACCCA  90
V  93.4% (270/289)  IGHV5-51*03  6    ..............................................................A.GG.........C..C...A...G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  T  Y  S  P
                    Query_3610   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGATGACTCTGATACAACATACAGTCC  180
V  93.4% (270/289)  IGHV5-51*03  96   ........G..........................................G.............G............C.G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  A
                    Query_3610   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCGTCAGCACCGCCTACCTACAGTGGCGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (270/289)  IGHV5-51*03  186  ........................................A................G......A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        I  Y  Y  C  V  R  R  S  S  E  G  Y  L  V  L  D  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_3610   271  CATATATTACTGTGTGAGACGCAGTAGCGAAGGCTATCTTGTCCTTGACTACTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  356
V  93.4% (270/289)  IGHV5-51*03  276  ...G..........C....-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (5/5)     IGHD2-15*01  18   -----------------------.....----------------------------------------------------------  22
J  97.6% (41/42)    IGHJ4*02     7    --------------------------------------------........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_317373

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            364     5e-103
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GTTCA	TACTATGATAATAGTGGTTAT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGTTCATACTATGATAATAGTGGTTATGACTACTATTACGGTATGGACGTC	AKGSYYDNSGYDYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3611   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGAGGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.8% (241/249)  IGHV3-9*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  N  L  G  Y  A  Y  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_3611   91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAACTTAGGCTATGCGTACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAGCGCCA  180
V  96.8% (241/249)  IGHV3-9*01   137  .................................G.A...........G................A...................A.....  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  K  P  E  D  T  A  L  Y  Y  C  A  K  G  S  Y  Y  D  N  S  
                    Query_3611   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAAACCTGAGGACACGGCCTTGTATTACTGTGCAAAAGGTTCATACTATGATAATAGTG  270
V  96.8% (241/249)  IGHV3-9*01   227  .................................G.G.................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  95.2% (20/21)    IGHD3-22*01  5    --------------------------------------------------------------------------..........G.....  20

                                      -IMGT----------------------->                                 
                                      G  Y  D  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3611   271  GTTATGACTACTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  95.2% (20/21)    IGHD3-22*01  21   .....---------------------------------------------------------  25
J  98.2% (55/56)    IGHJ6*02     7    ------.......C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_226563

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           304     1e-84
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACAGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACAGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	218	24	0	90.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_3612   4    CCCTGAGACTCTCCTGTGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAGT  93
V  90.1% (218/242)  IGHV4-34*01  50   .....TCC...A....C..............G...T..................G...........................G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  L  S  L  D  M  S  K  K  
                    Query_3612   94   GGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGCGTCTCCTTATCATTAGACATGTCCAAGAAGC  183
V  90.1% (218/242)  IGHV4-34*01  140  ............................C..................C..A.......A...A..A.....G......C.........C.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  V  K  V  T  S  V  T  A  A  D  T  A  V  Y  H  C  A  R  T  V  K  G  V  I  T  V  Y  
                    Query_3612   184  AGTTCTCCGTGAAGGTGACGTCTGTGACCGCCGCGGACACGGCTGTTTATCACTGTGCGAGAACAGTAAAGGGGGTTATTACTGTCTACC  273
V  90.1% (218/242)  IGHV4-34*01  230  ........C.....C...GC..........................G...T...........----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD3-22*01  20   -------------------------------------------------------------------------..........-------  29

                                      ------------------->                                 
                                      Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3612   274  AGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (40/40)   IGHJ6*02     23   -------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_167725

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD2-15*01                                                                                           19.9    0.15  
IGHJ3*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAGAC	GGTGGTAGCT	CCTGG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGACGGTGGTAGCTCCTGGGATGCTTTTGATATC	ARQDGGSSWDAFDI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3613   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (239/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3613   91   TGGATTGGGTATATCTATTACACTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  ......................G.............................................A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  D  G  G  S  S  W  D  A 
                    Query_3613   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGACAAGACGGTGGTAGCTCCTGGGATGCT  270
V  98.4% (239/243)  IGHV4-59*01  229  .............A.....G...........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD2-15*01  14   ---------------------------------------------------------------------..........-----------  23
J  98.0% (48/49)    IGHJ3*02     2    ------------------------------------------------------------------------------------......  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_3613   271  TTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  313
J  98.0% (48/49)    IGHJ3*02     8    ........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_317378

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-16*01                                                                                           10.3    116  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGACGAGGGGCA	GGGGG	CGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGACGAGGGGCAGGGGGCGGTTGACTCT	ARVDEGQGAVDS	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  K  V  S  G  G  S  I  T  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3614   1    ACCCTGTCCCTCACCTGCAAGGTCTCTGGGGGCTCCATCACGACTTACTACTGGAGTTGGATCCGACAGCCCCCAGGGAAGGGACTGGAG  90
V  91.8% (224/244)  IGHV4-59*01  49   ...................CT........T..........GT.G............C........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  V  N  R  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_3614   91   TGGATTGGGTATATCTATTACACTGGCAGTGTCAACCGCAACCCCTCCCTCAAGAGTCGAGTCACCATGTCGGTAGACACGTCCAAGAAC  180
V  91.8% (224/244)  IGHV4-59*01  139  ......................G...G..CAC....TA..............................A..A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  D  E  G  Q  G  A  V  D 
                    Query_3614   181  CAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTTGACGAGGGGCAGGGGGCGGTTGAC  270
V  91.8% (224/244)  IGHV4-59*01  229  ...............C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -----------------------------------------------------------------------------.....--------  22
J  92.9% (39/42)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3614   271  TCTTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  307
J  92.9% (39/42)    IGHJ4*02     12   .AC.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_320684

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCCCGGCAGG	GTGGGATCTACT	TG	ACGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTC	ARHGPAGWDLLDAMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  A  Q  S  G  A  E  V  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  N  F  N  S  N
                    Query_3615   1    GCAGCTGGCGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGTTCTGGATACAACTTTAACAGTAA  90
V  93.1% (271/291)  IGHV5-51*01  6    ........T...........................C.............A..........................G.....C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_3615   91   CTGGATCGGATGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACCAGATATAGGCC  180
V  93.1% (271/291)  IGHV5-51*01  96   .........C..................................................T.......................C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  T  A  D  K  S  T  T  T  A  Y  L  R  W  S  S  L  K  A  S  D  T  A
                    Query_3615   181  GTCCTTCCAAGGCCACGTCACCATTACAGCCGACAAGTCCACCACCACCGCCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACACTGC  270
V  93.1% (271/291)  IGHV5-51*01  186  ...............G........CT...............T..G..............A...........................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        T  Y  Y  C  A  R  H  G  P  A  G  W  D  L  L  D  A  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_3615   271  CACTTATTACTGTGCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  93.1% (271/291)  IGHV5-51*01  276  ..TG.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD1-26*01  7    ---------------------------------......G.....---------------------------------------------  18
J  97.9% (46/47)    IGHJ6*02     16   -----------------------------------------------...G.......................................  58

                                          
                                        S 
                    Query_3615   361  CTCA  364
J  97.9% (46/47)    IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_44299

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            344     6e-97
IGHD3-16*01                                                                                           12.2    30   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAA	ATTACCTTT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATTACCTTTTTTGACTTT	ARQITFFDF	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3616   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACAACCTATTGGATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (234/248)  IGHV3-7*01   47   ..........................................GT.G...........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  K  E  D  G  S  E  K  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3616   91   AGTGGGTGGCCAGCATAAAGGAAGATGGAAGTGAGAAGCACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (234/248)  IGHV3-7*01   137  ............A.......C................AT...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  V  F  L  Q  M  K  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  T  F  F  D  F  
                    Query_3616   181  AGAACTCTGTGTTTCTGCAAATGAAGAGCCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGACAAATTACCTTTTTTGACTTTT  270
V  94.4% (234/248)  IGHV3-7*01   227  .......AC...A............C................................C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD3-16*01  9    -----------------------------------------------------------------------.....G...----------  17
J  93.0% (40/43)    IGHJ4*02     6    --------------------------------------------------------------------------------.......AC.  15

                                                                       
                                      W  G  Q  G  T  L  V  A  V  S  S  
                    Query_3616   271  GGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  303
J  93.0% (40/43)    IGHJ4*02     16   ....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_225740

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           371     7e-105
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTAGA	TCAGGA	TGTACTAATACCAGCTGCT	CTCCGGAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTAGATCAGGATGTACTAATACCAGCTGCTCTCCGGATCTACTACTACGGTTTGGACGTC	AVDQDVLIPAALRIYYYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  V  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_3617   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTGTTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  97.2% (244/251)  IGHV4-61*08  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  S  G  I  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3617   91   CTGGAGTGGATTGGGTATATCTATAACAGTGGGATCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  97.2% (244/251)  IGHV4-61*08  139  ........................T.........G.......................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       T  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  V  D  Q  D  V  L  I  P 
                    Query_3617   181  ACGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGGTAGATCAGGATGTACTAATACCA  270
V  97.2% (244/251)  IGHV4-61*08  229  .A.......................G........................................AG...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.5% (17/19)    IGHD2-2*01   8    -----------------------------------------------------------------------------....G..G.....  20

                                      CDR3-IMGT-------------------------->                                 
                                       A  A  L  R  I  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3617   271  GCTGCTCTCCGGATCTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  339
D  89.5% (17/19)    IGHD2-2*01   21   ......---------------------------------------------------------------  26
J  98.2% (54/55)    IGHJ6*02     8    --------------.............A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_44293

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           341     5e-96
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGATGGA	ATTACTAT	CAAACGAAGCA	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCGATGGAATTACTATCAAACGAAGCAATGGTTTTGATATA	TRGDGITIKRSNGFDI	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_3618   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGGCTTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  94.3% (232/246)  IGHV3-53*01  47   ................................................A.......AGC......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  G  G  G  T  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_3618   91   AGTGGGTCTCAGTTATTTACGGCGGTGGTACCACATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.3% (232/246)  IGHV3-53*01  137  ...................TA.........G........A..................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  L  Y  Y  C  T  R  G  D  G  I  T  I  K  R  
                    Query_3618   181  ACACGCTGTATCTTCAAATGCACAGCCTGAGAGCCGACGACACGGCCCTGTACTACTGTACGAGAGGCGATGGAATTACTATCAAACGAA  270
V  94.3% (232/246)  IGHV3-53*01  227  ....................A................G.........G....T......G......------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  3    --------------------------------------------------------------------------........--------  10

                                      ---------------->                                  
                                      S  N  G  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3618   271  GCAATGGTTTTGATATATGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  321
J  93.8% (45/48)    IGHJ3*02     3    ---...C.........C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_44292

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*07                                                                                           361     4e-102
IGHD3-16*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*07	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	241	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  S  S  G  S  H  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_3619   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTCAGCAGTGGTAGTCACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.0% (241/251)  IGHV4-39*07  49   ....................................A........A.....T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3619   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  96.0% (241/251)  IGHV4-39*07  139  .....................T....................................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  A  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S 
                    Query_3619   181  AAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACGCAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGT  270
V  96.0% (241/251)  IGHV4-39*07  229  ...................A.....G............C......A.G.C.....................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------------....T..............  25

                                      -------->                                  
                                       P  G  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3619   271  CCGGGACACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  97.2% (35/36)    IGHJ4*02     13   -------................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_44291

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           389     2e-110
IGHD2-8*01                                                                                            19.9    0.18  
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGGTAGG	ATGGTGTATG	ATTCAAGGGG	CTGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGGTAGGATGGTGTATGATTCAAGGGGCTGCTTCGACCCC	ARLGRMVYDSRGCFDP	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	70	4	0	94.6
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	104	10	0	91.2
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	271	22	0	92.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  
                    Query_3620   2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCCGGATACACTTTTAGCA  91
V  92.5% (271/293)  IGHV5-51*03  2    ....G.....G.......................A......................................T.......GC....C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  S  I  Y  P  G  D  S  D  T  R  Y  
                    Query_3620   92   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGCTGGGGAGTATCTATCCCGGTGACTCTGATACCAGATACA  181
V  92.5% (271/293)  IGHV5-51*03  92   G.................................................A......TC........T......................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  T  F  Q  G  R  V  T  M  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  K  L  E  A  S  D  
                    Query_3620   182  ACCCGACCTTCCAAGGCCGGGTCACCATGTCAGCCGACAAGTCCATCAACACCGCCTACCTCCAGTGGAGCAAGCTGGAGGCCTCGGACA  271
V  92.5% (271/293)  IGHV5-51*03  182  G....T............A.........C...................G............G..........GC...A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      T  A  I  Y  Y  C  A  R  L  G  R  M  V  Y  D  S  R  G  C  F  D  P  W  G  Q  G  T  L  V  T  
                    Query_3620   272  CCGCCATCTATTACTGTGCGAGACTGGGTAGGATGGTGTATGATTCAAGGGGCTGCTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCG  361
V  92.5% (271/293)  IGHV5-51*03  272  .......G...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD2-8*01   15   --------------------------------..........------------------------------------------------  24
J  97.9% (46/47)    IGHJ5*02     5    ----------------------------------------------------...G..................................  42

                                               
                                      V  S  S  
                    Query_3620   362  TCTCCTCAG  370
J  97.9% (46/47)    IGHJ5*02     43   .........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_44290

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3621   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ......................................C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_3621   91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P 
                    Query_3621   181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC  270
V  90.6% (221/244)  IGHV4-59*01  229  ...........G...C....C...........T............G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  95.7% (44/46)    IGHJ5*02     6    ------------------------------------------------------------------------------............  17

                                                                        
                                       W  G  Q  G  A  L  V  S  V  S  S  
                    Query_3621   271  TGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  304
J  95.7% (44/46)    IGHJ5*02     18   ............A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_44297

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           353     1e-99
IGHD3-10*01                                                                                           44.9    5e-09
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCATGTGACCGATTACACCAGCCCA	TATGGTTCGGGGAGTTATTATAA	GA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATGTGACCGATTACACCAGCCCATATGGTTCGGGGAGTTATTATAAGAACTACTTTGACTAC	AKDHVTDYTSPYGSGSYYKNYFDY	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  R  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3622   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCCGGATTCACCTTCAGAAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-30*18  47   ........................C...T..............T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  K  D  G  S  N  E  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3622   91   AGTGGGTGGCAGTAATATCAAAGGATGGAAGTAATGAAAACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  95.2% (238/250)  IGHV3-30*18  137  .............T......T.T............A..T..............................................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  H  V  T  D  Y  T  
                    Query_3622   181  AGAACACGGTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTCTATTACTGTGCGAAAGATCATGTGACCGATTACACCA  270
V  95.2% (238/250)  IGHV3-30*18  227  ........C...........................................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      ----CDR3-IMGT------------------------------>                                  
                                      S  P  Y  G  S  G  S  Y  Y  K  N  Y  F  D  Y  W  G  Q  G  A  R  V  A  V  S  S  
                    Query_3622   271  GCCCATATGGTTCGGGGAGTTATTATAAGAACTACTTTGACTACTGGGGCCAGGGAGCCCGGGTCGCCGTCTCCTCAG  348
D  100.0% (23/23)   IGHD3-10*01  8    -----.......................--------------------------------------------------  30
J  93.8% (45/48)    IGHJ4*02     1    ------------------------------..........................A...T....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_44296

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           343     2e-96
IGHD6-13*01                                                                                           21.8    0.041
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  L  S  G  G  S  I  S  S  G  G  F  Y  W  N  W  I  R  Q  H  P  G  K  G  
                    Query_3623   4    CCCTGAGACTCTCCTGTACTCTCTCTGGTGGCTCCATCAGCAGTGGTGGTTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  94.0% (234/249)  IGHV4-31*02  50   .....TCC...A........G..............................A........G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  H  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  
                    Query_3623   94   TGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCTA  183
V  94.0% (234/249)  IGHV4-31*02  140  ....................T..................A.................................A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V  
                    Query_3623   184  AGAACCAATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTAG  273
V  94.0% (234/249)  IGHV4-31*02  230  .......G..........A.....GC...............................A...........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  11   -----------------------------------------------------------------------...........--------  21

                                      ---------------->                                  
                                      G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3623   274  GCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
J  98.0% (48/49)    IGHJ3*01     2    --.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_40685

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           321     7e-90
IGHJ4*02                                                                                              44.9    1e-08


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	N/A	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCACA	N/A	N/A	ACTTTCCCCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAACTTTCCCCTTC	TTTFPF	287	304	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	62	8	0	88.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	173	30	21	7	2	70
FR3-IMGT	174	286	114	94	19	1	82.5
CDR3-IMGT (germline)	287	292	6	6	0	0	100
Total	N/A	N/A	295	252	40	3	85.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  R  R  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  R  K  A
                    Query_3624   1    GCAGCTGGTGCAGTCTGGAGGAGGCTTAGTAAGGCGGGGGGGGTCTCTTAGACTCTCTTGTGCAGCCTCTGGATTCACTTTCAGGAAGGC  90
V  85.4% (252/295)  IGHV3-15*01  6    ..........G.......G........G....A..CT........C...........C..........................T..C..  95
                                        Q  L  V  E  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A

                                      ---><--------------------FR2-IMGT---------------------><----------CDR2-IMGT---------><----
                                        W  M  T  W  V  R  P  A  P  G  K  G  V  E  W  V  G  L  I  K  K  K  K  E  G  E  T     K  Y
                    Query_3624   91   CTGGATGACCTGGGTCCGCCCGGCTCCAGGGAAGGGGGTGGAGTGGGTTGGCCTTATTAAAAAAAAAAAAGAAGGCGAGACAA---AGTA  177
V  85.4% (252/295)  IGHV3-15*01  96   ........G...........A................C...............G........GC....CT..T..T.G.....CAG.C..  185
                                        W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y

                                      ------------------------------------------------FR3-IMGT----------------------------------
                                        A  V  A  V  K  D  R  F  P  I  S  R  D  E  S  T  N  T  L  Y  L  E  M  S  N  L  R  S  D  D
                    Query_3624   178  TGCTGTAGCCGTGAAGGACAGATTCCCCATCTCAAGAGATGAATCAACAAACACGTTATATCTGGAAATGAGCAACCTGAGATCCGACGA  267
V  85.4% (252/295)  IGHV3-15*01  186  C....C.C.......A.G.......A................T....A.......C.G......C......A..G.....A.A....G..  275
                                        A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D

                                      ------------------><----CDR3-IMGT--->                                  
                                        T  A  V  Y  Y  *  T  T  T  F  P  F  W  G  Q  G  M  M  V  P  V  S  S  
                    Query_3624   268  CACAGCCGTGTATTATTGAACCACAACTTTCCCCTTCTGGGGCCAGGGAATGATGGTCCCCGTCTCCTCAG  338
V  85.4% (252/295)  IGHV3-15*01  276  ...............C..T......----------------------------------------------  300
                                        T  A  V  Y  Y  C  T  T                                               
J  88.6% (31/35)    IGHJ4*02     14   ------------------------------------..............CCC.....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_266153

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     1e-109
IGHD6-25*01                                                                                           14.1    9.4   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTC	ARQSSAGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	269	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  R  S  S  G  Y  D  F  L  D  Y
                    Query_3625   1    GCAGCTGGTGCAGTCTGGAGCAGAGCTAAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGAGTTCTGGGTACGACTTTCTCGACTA  90
V  92.4% (269/291)  IGHV5-51*01  6    .........................G.G..A.....C.........................A.G.......A...AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_3625   91   CTGGATCGTCTGGGTGCGCCAAATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGTCC  180
V  92.4% (269/291)  IGHV5-51*01  96   ........G............G..........................................................G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  A
                    Query_3625   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGCGCAGTCTGAAGGCCTCGGACACCGC  270
V  92.4% (269/291)  IGHV5-51*01  186  .............................C...............C..................A....C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_3625   271  CAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  360
V  92.4% (269/291)  IGHV5-51*01  276  ..T..................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  100.0% (48/48)   IGHJ6*02     15   -------------------------------------------...............................................  61

                                       
                                       
                    Query_3625   361  A  361
J  100.0% (48/48)   IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_266152

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           363     1e-102
IGHD5-18*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TCAGGGGA	GTGGATATACCTATGGTT	TACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATCAGGGGAGTGGATATACCTATGGTTTACCTGACTAC	AKDQGSGYTYGLPDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3626   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGC  90
V  96.4% (241/250)  IGHV3-30*18  47   .........................................................................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  V  V  S  Y  D  G  S  Y  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3626   91   AATGGGTGGCAGTTGTATCCTATGATGGAAGTTATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.4% (241/250)  IGHV3-30*18  137  .G............A....A............A.........................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  S  T  L  F  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  Q  G  S  G  Y  T  
                    Query_3626   181  AGAGCACGCTGTTTCTGCAAATGAACGGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAGGATCAGGGGAGTGGATATACCT  270
V  96.4% (241/250)  IGHV3-30*18  227  ...A........A.............A........................................A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.9% (16/18)    IGHD5-18*01  1    ------------------------------------------------------------------------------.......C.G..  12

                                      ---------------->                                  
                                      Y  G  L  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3626   271  ATGGTTTACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  88.9% (16/18)    IGHD5-18*01  13   ......---------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ----------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_266150

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGATGGA	ATTACTAT	CAAACGAAGCA	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCGATGGAATTACTATCAAACGAAGCAATGGTTTTGATATA	TRGDGITIKRSNGFDI	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_3627   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGGCTTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  94.7% (233/246)  IGHV3-53*01  47   ................................................A.......AGC......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_3627   91   AGTGGGTCTCAGTTATTTACAGCGGTGGTACCACATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.7% (233/246)  IGHV3-53*01  137  ...................T..........G........A..................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  L  Y  Y  C  T  R  G  D  G  I  T  I  K  R  
                    Query_3627   181  ACACGCTGTATCTTCAAATGCACAGCCTGAGAGCCGACGACACGGCCCTGTACTACTGTACGAGAGGCGATGGAATTACTATCAAACGAA  270
V  94.7% (233/246)  IGHV3-53*01  227  ....................A................G.........G....T......G......------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  3    --------------------------------------------------------------------------........--------  10

                                      ---------------->                                  
                                      S  N  G  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3627   271  GCAATGGTTTTGATATATGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  321
J  93.8% (45/48)    IGHJ3*02     3    ---...C.........C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_266157

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           315     5e-88
IGHD2-21*01                                                                                           10.3    122  
IGHJ6*02                                                                                              39.1    6e-07


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCA	GGTGA	GGGGCTTCG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCAGGTGAGGGGCTTCGACTTCTACCACGGGTTTGACGTC	ARGQVRGFDFYHGFDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	225	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  N  M  Y  A  F  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3628   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGCTTCAATATGTATGCCTTCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.4% (225/249)  IGHV3-33*01  47   ....................................C.....G..GC....G.A.G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  R  S  K  Y  N  V  G  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3628   91   AGTGGGTGGCAGTCATTTGGTATGACGGAAGGAGTAAATACAATGTGGGCTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAATTCCA  180
V  90.4% (225/249)  IGHV3-33*01  137  .............T..A........T.....T.A.......T...CA.A...............A.........................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  E  M  K  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  Q  V  R  G  F  D  
                    Query_3628   181  AAAACACACTATATCTGGAAATGAAGAGCCTGAGAGCCGAGGACACGGCTGTATATTATTGTGCGAGAGGGCAGGTGAGGGGCTTCGACT  270
V  90.4% (225/249)  IGHV3-33*01  227  .G.....G..G......C.......C..........................G.....C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-21*01  14   -------------------------------------------------------------------------.....------------  18
J  80.9% (38/47)    IGHJ6*02     7    ---------------------------------------------------------------------------------------...  9

                                      T------------------>                        
                                      F  Y  H  G  F  D  V  R  G  P  G  A  P  V  T 
                    Query_3628   271  TCTACCACGGGTTTGACGTCCGGGGCCCAGGGGCCCCGGTCACC  314
J  80.9% (38/47)    IGHJ6*02     10   A....T....TA.G......T......A....A..A........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_266156

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           420     7e-120
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTAGAA	GGTTCGGGGAGT	CACGACTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTAGAAGGTTCGGGGAGTCACGACTCTTACTACTACGCTATGGACGTC	ARDPLEGSGSHDSYYYAMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  R  Y
                    Query_3629   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGGTA  90
V  96.2% (280/291)  IGHV1-46*01  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  I  I  N  P  S  G  G  T  T  K  Y  A  Q
                    Query_3629   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCAATAATCAATCCTAGTGGTGGTACCACAAAATACGCACA  180
V  96.2% (280/291)  IGHV1-46*01  96   ..................................................G.........C.............G.....GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  D  L  T  S  L  R  S  E  D  T  A
                    Query_3629   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGACCTGACCAGCCTGAGATCTGAGGACACGGC  270
V  96.2% (280/291)  IGHV1-46*01  186  ............................................................G....G........................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        I  Y  Y  C  A  R  D  P  L  E  G  S  G  S  H  D  S  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T
                    Query_3629   271  CATCTATTACTGTGCGAGAGATCCTTTAGAAGGTTCGGGGAGTCACGACTCTTACTACTACGCTATGGACGTCTGGGGCCAAGGGACCAC  360
V  96.2% (280/291)  IGHV1-46*01  276  .G.G.................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD3-10*01  11   -------------------------------............-----------------------------------------------  22
J  98.1% (53/54)    IGHJ6*02     9    ----------------------------------------------------..........G...........................  46

                                                      
                                        V  T  V  S  S 
                    Query_3629   361  GGTCACCGTCTCCTCA  376
J  98.1% (53/54)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_266155

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           353     9e-100
IGHD3-3*01                                                                                            10.3    115   
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGCGGAAA	GATTT	C	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGCGGAAAGATTTCCTACTTTGACTAC	ARRGKISYFDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	26	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	242	234	8	0	96.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  T  V  S  H  G  S  I  S  G  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_3630   2    CCCTGTCCCTCACCTGCACTGTCTCTCATGGCTCCATCAGTGGTTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  91
V  96.7% (234/242)  IGHV4-59*01  50   ..........................GG.............A...A......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  G  T  M  S  V  D  T  S  K  N  
                    Query_3630   92   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGGCACCATGTCAGTAGACACGTCCAAGAACC  181
V  96.7% (234/242)  IGHV4-59*01  140  ............................................................T......A......................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  K  I  S  Y  F  D  Y  
                    Query_3630   182  AGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGACGCGGAAAGATTTCCTACTTTGACTACT  271
V  96.7% (234/242)  IGHV4-59*01  230  ..................G...........................................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (5/5)     IGHD3-3*01   8    ----------------------------------------------------------------------.....---------------  12
J  97.9% (46/47)    IGHJ4*02     2    ----------------------------------------------------------------------------..............  15

                                                                       
                                      W  G  L  G  T  L  V  T  V  S  S  
                    Query_3630   272  GGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  304
J  97.9% (46/47)    IGHJ4*02     16   ......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_266154

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-16*02                                                                                           12.2    32   
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGT	TCGTTA	CCCAATCTTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTTCGTTACCCAATCTTGGCTACTACTACGGTATGGACGTC	ARDRSLPNLGYYYGMDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  M  G  L  E 
                    Query_3631   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGATGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...............................G.........T...........................C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  Y  S  G  T  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_3631   91   TGGATTGGGCATATCTATTACAGTGGGACCACCAGTTACAATCCTTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAT  180
V  93.5% (229/245)  IGHV4-59*01  139  .........T..................G.....AC.....C..C...........................G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  S  L  P  N  L  G  Y 
                    Query_3631   181  CAGTTCTCCCTGAAGCTGAATTCCGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATCGTTCGTTACCCAATCTTGGCTAC  270
V  93.5% (229/245)  IGHV4-59*01  229  ...................GC..T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*02  28   ---------------------------------------------------------------------......---------------  33
J  96.4% (53/55)    IGHJ6*02     8    --------------------------------------------------------------------------------------....  11

                                      ----------------->                                 
                                       Y  Y  G  M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_3631   271  TACTACGGTATGGACGTCTGGGGCCAAGGGGCCACCGTCACCGTCTCCTCA  321
J  96.4% (53/55)    IGHJ6*02     12   ..............................A....G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_266159

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           285     4e-79
IGHD5-18*01                                                                                           14.1    8.8  
IGHJ3*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GAATTTGGCGGG	ACAGCTTTGG	CCAGGC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGAATTTGGCGGGACAGCTTTGGCCAGGCTGATGCTTTTGATGTC	AKGIWRDSFGQADAFDV	252	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	137	33	21	3	9	63.6
FR3-IMGT	138	251	114	96	18	0	84.2
CDR3-IMGT (germline)	252	258	7	7	0	0	100
Total	N/A	N/A	258	222	27	9	86


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3632   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAGTAACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  86.0% (222/258)  IGHV3-23*01  47   ....................................C......C.G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----------CDR2-IMGT-----------><------------------------------------------
                                      E  W  V  S  L  I  S  G  S  G  A  R  G  R  S  T  Y  Y  A  S  S  V  K  G  R  F  T  I  S  R  
                    Query_3632   91   AGTGGGTCTCACTTATTAGCGGAAGTGGTGCTAGAGGTCGTAGTACATATTATGCAAGCTCCGTGAAGGGCCGGTTCACCATCTCCAGAG  180
V  86.0% (222/258)  IGHV3-23*01  137  ...........GC......T..T.......---------....C.....C..C...GA................................  217
                                      E  W  V  S  A  I  S  G  S  G           G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  

                                      ----------FR3-IMGT----------------------------------------------------><------------------
                                      D  N  S  K  K  M  M  F  L  D  M  G  S  L  R  V  E  D  T  A  I  Y  Y  C  A  K  G  I  W  R  
                    Query_3632   181  ACAACTCCAAGAAAATGATGTTTTTGGATATGGGGAGCCTGAGAGTCGAGGACACGGCCATATATTATTGTGCGAAAGGAATTTGGCGGG  270
V  86.0% (222/258)  IGHV3-23*01  218  ....T........C.C.C...A.C..C.A...AAC..........C.............G.......C..........------------  295
                                      D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K              

                                      --CDR3-IMGT-------------------->                                  
                                      D  S  F  G  Q  A  D  A  F  D  V  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_3632   271  ACAGCTTTGGCCAGGCTGATGCTTTTGATGTCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  336
D  90.0% (9/10)     IGHD5-18*01  7    ......A...--------------------------------------------------------  16
J  98.0% (49/50)    IGHJ3*01     1    ----------------...............................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_266158

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           300     8e-84
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGTGTACGGAAATCAG	TATGATGGTAGTGGTTA	CCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTGTACGGAAATCAGTATGATGGTAGTGGTTACCCTGACTCC	ARGVYGNQYDGSGYPDS	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	217	25	0	89.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  S  G  S  I  S  A  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E  
                    Query_3633   4    CCCTGAGACTCTCCTGCACTGTCTCTAGTGGCTCCATCAGTGCTTACTACTGGAGTTGGGTCCGGCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  89.7% (217/242)  IGHV4-59*08  50   .....TCC...A..............G..............AG............C...A......................A.......  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  N  L  Y  Y  R  G  S  T  R  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  K  
                    Query_3633   94   GGATTGGGAATCTGTATTACAGAGGTAGTACCAGATACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAGC  183
V  89.7% (217/242)  IGHV4-59*08  140  ........T..A.C........T..G..C....AC....................................G................C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      Q  F  S  L  E  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  Y  G  N  Q  Y  D  G  
                    Query_3633   184  AATTCTCCCTGGAGGTGCGCTCTGTCACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGGGGTGTACGGAAATCAGTATGATGGTA  273
V  89.7% (217/242)  IGHV4-59*08  230  .G.........A..C..A.......G....................................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  94.1% (16/17)    IGHD3-22*01  8    --------------------------------------------------------------------------------......A...  17

                                      ---------------->                                  
                                      S  G  Y  P  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3633   274  GTGGTTACCCTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  94.1% (16/17)    IGHD3-22*01  18   .......--------------------------------------------  24
J  97.6% (40/41)    IGHJ4*02     8    ----------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_142973

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            388     5e-110
IGHD6-19*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTCGGCAGC	GGGTATAGTCGTGCCTGGT	TCTTCCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCGGCAGCGGGTATAGTCGTGCCTGGTTCTTCCTTCTTTGACGAC	ARESAAGIVVPGSSFFDD	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  I  S  C  K  A  S  G  Y  T  F  T  A  Y 
                    Query_3634   2    CAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCTTCTGGATACACCTTCACTGCCTAT  91
V  92.8% (269/290)  IGHV1-3*01   7    .....T.............................................G................................AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       V  I  H  W  M  R  Q  A  P  G  Q  R  L  E  W  M  G  W  V  N  P  A  Y  G  S  T  K  Y  S  Q 
                    Query_3634   92   GTTATACATTGGATGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGGTCAACCCTGCCTATGGTAGCACAAAGTATTCACAG  181
V  92.8% (269/290)  IGHV1-3*01   97   .C...G......G.........................................A.....G...G.A......A......A.........  186
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  F  Q  G  R  V  T  I  T  S  D  T  S  A  S  T  A  Y  M  H  L  G  S  L  R  S  D  D  T  A 
                    Query_3634   182  AGGTTTCAGGGCAGAGTCACCATTACCAGCGACACATCCGCGAGCACAGCCTACATGCACCTGGGCAGTCTGAGATCTGATGACACGGCT  271
V  92.8% (269/290)  IGHV1-3*01   187  .A...C.......................G...........................G.G...A....C...........A.........  276
                                       K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  E  S  A  A  G  I  V  V  P  G  S  S  F  F  D  D  W  G  Q  G  T  L  V  T 
                    Query_3634   272  GTGTATTACTGTGCGAGAGAGTCGGCAGCGGGTATAGTCGTGCCTGGTTCTTCCTTCTTTGACGACTGGGGCCAGGGAACCCTGGTCACC  361
V  92.8% (269/290)  IGHV1-3*01   277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  84.2% (16/19)    IGHD6-19*01  1    -----------------------------........CA...G.....------------------------------------------  19
J  97.7% (43/44)    IGHJ4*02     5    --------------------------------------------------------.......T..........................  38

                                                
                                       V  S  S  
                    Query_3634   362  GTCTCCTCAG  371
J  97.7% (43/44)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_94779

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD3-22*01                                                                                           16.1    2.3   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCAC	ARAPPFDYDLDVRGIHNFDH	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	236	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3635   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (236/244)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_3635   91   TGGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAGC  180
V  96.7% (236/244)  IGHV4-59*01  139  ..........A.................G.............................................A.............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D 
                    Query_3635   181  CAGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGAC  270
V  96.7% (236/244)  IGHV4-59*01  229  ..................AG...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-22*01  6    ----------------------------------------------------------------------------........------  13

                                      GT------------------------>                                  
                                       V  R  G  I  H  N  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3635   271  GTAAGGGGAATCCACAACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  97.8% (44/45)    IGHJ4*02     4    ----------------........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_31625

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           322     2e-90
IGHD2-15*01                                                                                           12.2    31   
IGHJ1*01                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCAGGTCGGG	GGTGGT	N/A	TTCCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCAGGTCGGGGGTGGTTTCCACCAC	AKDQVGGGFHH	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3636   1    GGTCCCTGAGACTCTCCTGTGAAGGCTCTGGATTCACCTTCCGAAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGC  90
V  91.2% (228/250)  IGHV3-30*18  47   .....................C..C................A.T.........................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  S  L  A  V  I  S  Y  D  G  S  N  K  F  Y  A  E  A  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3636   91   AGTCGCTGGCAGTTATTTCATATGATGGAAGTAACAAATTCTATGCAGAGGCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCGA  180
V  91.2% (228/250)  IGHV3-30*18  137  ...G.G..........A.................T....A.........CT.....................................C.  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      R  N  T  L  F  L  Q  I  N  S  V  R  P  E  D  T  A  V  Y  Y  C  A  K  D  Q  V  G  G  G  F  
                    Query_3636   181  GGAACACACTGTTTCTGCAAATCAACAGCGTGAGACCTGAAGACACGGCTGTCTATTACTGTGCGAAAGATCAGGTCGGGGGTGGTTTCC  270
V  91.2% (228/250)  IGHV3-30*18  227  A......G....A.........G......C.....G....G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-15*01  14   --------------------------------------------------------------------------------......----  19
J  93.0% (40/43)    IGHJ1*01     10   --------------------------------------------------------------------------------------....  13

                                      ---->                                  
                                      H  H  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_3636   271  ACCACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  309
J  93.0% (40/43)    IGHJ1*01     14   .G..............C..........C...........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_190119

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q 
                    Query_3637   1    ACCCTGTCCCTCACCTGCACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAA  90
V  91.0% (223/245)  IGHV4-59*01  49   ....................T..........................C........C............C.................G.G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_3637   91   TGGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAAC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A....G.....C...T....T....G......C..............C...........C.C.........A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E 
                    Query_3637   181  CAGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAG  270
V  91.0% (223/245)  IGHV4-59*01  229  ...T.........AG..G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  1    -----------------------------------------------------------------------------............-  12

                                      -------------->                                  
                                       D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_3637   271  GATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  319
J  92.5% (37/40)    IGHJ4*02     9    ---------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_190117

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           336     1e-94
IGHD3-22*01                                                                                           23.8    0.011
IGHJ2*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CC	ATGATAGTAGTG	ACGACCACAATGGGTAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCATGATAGTAGTGACGACCACAATGGGTATTACTTCGAGATC	ARDHDSSDDHNGYYFEI	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	233	18	0	92.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  G  G  Y  F  W  N  W  I  R  Q  R  P  G  K  G 
                    Query_3638   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCGGTGGTGGTTACTTCTGGAACTGGATCCGCCAGCGCCCAGGGAAGGGC  90
V  92.8% (233/251)  IGHV4-31*03  49   ..........................................A............A.....G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  A  S  T  Q  Y  N  P  S  L  K  G  R  V  T  I  S  A  D  T  S 
                    Query_3638   91   CTAGAGTGGATTGGGAACATCTTTTACAGTGCGAGCACCCAGTACAACCCGTCCCTCAAGGGTCGAGTTACCATATCAGCAGACACGTCT  180
V  92.8% (233/251)  IGHV4-31*03  139  ..G............T......A........G.......T.C..................A..................T..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  N  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  D  H  D  S  S  D  D 
                    Query_3638   181  AAGAATCAGTTCTCCCTGAAACTGAACTCCATGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGACCATGATAGTAGTGACGAC  270
V  92.8% (233/251)  IGHV4-31*03  229  .....C..............G....G...TG......................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD3-22*01  9    -------------------------------------------------------------------------............-----  20

                                      MGT-------------------->                                  
                                       H  N  G  Y  Y  F  E  I  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3638   271  CACAATGGGTATTACTTCGAGATCTGGGGCCGTGGCACCCTGGTCACCGTCTCCTCAG  328
J  93.5% (43/46)    IGHJ2*01     8    ------------........TC.........................T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_292161

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_3639   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_3639   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  R  A  P  D  T  A
                    Query_3639   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAGGGCCCCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .......C.....................................C...........G......A.........A....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_3639   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_3639   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_190115

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           297     7e-83
IGHD7-27*01                                                                                           12.2    32   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TACCCCAAGACATGGTAATCC	CTGGGG	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATACCCCAAGACATGGTAATCCCTGGGGTGACTTC	ARDTPRHGNPWGDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  V  S  G  F  T  F  S  N  Y  E  M  N  W  I  R  Q  V  P  G  K  G  L  
                    Query_3640   1    GGTCCCTGAGACTCTCCTGTGTAGTCTCTGGATTCACCTTCAGTAATTATGAGATGAACTGGATCCGCCAAGTTCCAGGGAAGGGCCTGG  90
V  88.0% (220/250)  IGHV3-48*03  47   .....................C..C....................G......A.........G.......G.C............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  T  D  G  G  N  A  I  Y  A  D  S  V  R  G  R  F  T  M  S  R  D  N  A  
                    Query_3640   91   AGTGGCTCTCATACATCAGTACTGATGGTGGCAATGCAATTTATGCAGACTCTGTGAGGGGCCGATTCACCATGTCCAGAGACAACGCCA  180
V  88.0% (220/250)  IGHV3-48*03  137  .....G.T........T....G.AG....A.T.CCAT.TAC..C.............A...............C................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  F  L  Q  M  D  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  T  P  R  H  G  N  
                    Query_3640   181  AGAACTCACTGTTTCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGAGGGATACCCCAAGACATGGTAATC  270
V  88.0% (220/250)  IGHV3-48*03  227  ............A..........A..........................G................A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ------------->                                
                                      P  W  G  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3640   271  CCTGGGGTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  316
D  100.0% (6/6)     IGHD7-27*01  5    -......---------------------------------------  10
J  97.4% (38/39)    IGHJ4*02     8    -------.....A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_190114

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD2-21*01                                                                                           18.0    0.60 
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CAGTTTCTGTCTTAGTTTGGACCGGGGAGT	TTGTGGTGG	N/A	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGGGGAGTTTGTGGTGGTTTTGATATG	ARGSFCLSLDRGVCGGFDM	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  N  G  G  S  L  N  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3641   1    ACCCTGTCCCTCACCTGCGCCGTCAATGGTGGGTCCCTCAATGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAG  90
V  92.2% (226/245)  IGHV4-34*01  49   ....................T...T...........T...G..G.......................................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  Q  S  G  T  T  N  Y  K  P  S  L  K  S  R  V  I  T  S  V  D  T  S  K  N 
                    Query_3641   91   TGGATTGGGGAAATCAATCAAAGTGGCACCACCAACTACAAGCCGTCCCTCAAGAGTCGAGTAATCACATCGGTGGACACGTCCAAGAAT  180
V  92.2% (226/245)  IGHV4-34*01  139  ....................T.....A.G............C....................C.C..T...A..A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  F  C  L  S  L  D  R 
                    Query_3641   181  CAGTTCTCCTTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGG  270
V  92.2% (226/245)  IGHV4-34*01  229  .........C.....C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      ----------------------->                               
                                       G  V  C  G  G  F  D  M  W  G  Q  G  T  M  V  T  V  S  
                    Query_3641   271  GGAGTTTGTGGTGGTTTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTT  325
D  100.0% (9/9)     IGHD2-21*01  7    -----.........-----------------------------------------  15
J  97.6% (40/41)    IGHJ3*02     7    --------------.........C...............................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_190112

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	221	24	6	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_3642   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.0% (221/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_3642   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.0% (221/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  G  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_3642   181  AAGAACCAGTTCTCCCTGAAATTGGGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.0% (221/251)  IGHV4-34*01  223  ....................GC..A.........C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_3642   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_190111

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            352     3e-99
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	CT	GTATGGCAGTGGC	CTCCATGGGGGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATCTGTATGGCAGTGGCCTCCATGGGGGGATTGACTGC	AKDLYGSGLHGGIDC	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	251	9	9	0	0	100
Total	N/A	N/A	251	238	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3643   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGACTATGCCATACACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  94.8% (238/251)  IGHV3-9*01   47   ..............................................T........G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  W  N  S  G  R  I  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_3643   91   AGTGGGTCTCAAGTATTAGTTGGAATAGTGGTAGGATATACTATGCGGACTCTGTGAAGGGCCGATTCTCCATCTCCAGAGACAACTCCA  180
V  94.8% (238/251)  IGHV3-9*01   137  ...........G......................C...GG............................A.................G...  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  V  Y  L  Q  M  N  S  L  G  A  E  D  T  A  L  Y  Y  C  A  K  D  L  Y  G  S  G  L  
                    Query_3643   181  AGAACTCCGTCTATCTGCAAATGAACAGTCTGGGAGCTGAGGACACGGCCCTCTATTACTGTGCAAAAGATCTGTATGGCAGTGGCCTCC  270
V  94.8% (238/251)  IGHV3-9*01   227  ........C.G.....................A.................T.G..................-------------------  297
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  92.3% (12/13)    IGHD6-19*01  3    -------------------------------------------------------------------------....A........----  15

                                      ---------------->                                  
                                      H  G  G  I  D  C  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_3643   271  ATGGGGGGATTGACTGCTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  321
J  95.2% (40/42)    IGHJ4*02     7    ---------......A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_190110

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*03                                                                                           305     3e-85
IGHD2-15*01                                                                                           10.3    128  
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATAGA	TC	AGGAT	GTGAACATACCCGCTGGCCTCCGGCTCCACTTT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATAGATCAGGATGTGAACATACCCGCTGGCCTCCGGCTCCACTTTTACGGTCTGGACGTC	AIDQDVNIPAGLRLHFYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	223	28	0	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  V  S  S  D  D  Y  F  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_3644   1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCGTCAGTAGTGATGATTACTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  88.8% (223/251)  IGHV4-61*03  49   ..................A....C.................C....G.AG.....A..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  K  S  G  V  T  K  S  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_3644   91   CTGGAATGGATTGGCTACATCTCCAAAAGTGGGGTCACCAAGTCCAACCCCTCCCTCAAGAGTCGAGTCTCCATCTCAGTTGACACGTCC  180
V  88.8% (223/251)  IGHV4-61*03  139  .....G........G..T....ATT.C......AG......C.A.........................A....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       T  N  R  F  S  L  K  L  T  S  V  T  A  V  D  T  A  V  Y  Y  C  A  I  D  Q  D  V  N  I  P 
                    Query_3644   181  ACGAACCGCTTCTCCCTGAAACTGACCTCTGTAACCGCTGTGGACACGGCCGTGTATTACTGTGCGATAGATCAGGATGTGAACATACCC  270
V  88.8% (223/251)  IGHV4-61*03  229  .A.....A............G....G......G.......C..........................G...-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD2-15*01  1    -------------------------------------------------------------------------.....------------  5

                                      CDR3-IMGT-------------------------->                                
                                       A  G  L  R  L  H  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_3644   271  GCTGGCCTCCGGCTCCACTTTTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  338
J  97.9% (46/47)    IGHJ6*02     15   ---------------------......A........................................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_312470

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           263     2e-72
IGHD2-15*01                                                                                           12.2    32   
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TGGTGG	CGGACGGGGGCTCGATTGGGGTGCGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTGGCGGACGGGGGCTCGATTGGGGTGCGGTGGTTCGACACC	ARLVADGGSIGVRWFDT	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	96	18	0	84.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	206	38	0	84.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  I  R  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  T  L  E 
                    Query_3645   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGCCTCCATTAGAAGTTATTACTGGAGTTGGGTTCGCCAGCCCCCCGGCAAGACACTGGAG  90
V  84.4% (206/244)  IGHV4-59*08  49   ...................C...........G......C..T.....C........C...A.C..G........A..G...GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  F  H  T  G  T  T  N  Y  H  P  S  L  K  S  R  V  T  I  S  S  D  T  S  K  N 
                    Query_3645   91   TGGATTGGCTATTTCTTTCACACCGGGACCACCAATTACCATCCCTCCCTCAAGAGTCGAGTCACCATTTCATCAGACACGTCCAAGAAC  180
V  84.4% (206/244)  IGHV4-59*08  139  ........G...A...A.T...GT....G......C...A.C..........................A...GT................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       I  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  V  A  D  G  G  S  I  G 
                    Query_3645   181  ATCTTCTCATTGACTCTGACGTCTGTGACCGCCGCAGACACGGCCGTCTATTTTTGTGCGAGACTGGTGGCGGACGGGGGCTCGATTGGG  270
V  84.4% (206/244)  IGHV4-59*08  229  CAG.....CC...AG....GC..........................G....AC..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-15*01  13   ----------------------------------------------------------------......--------------------  18

                                      ----------------->                                  
                                       V  R  W  F  D  T  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_3645   271  GTGCGGTGGTTCGACACCTGGGGCCAGGGAACGCTGGTCAGCGTCTCATCAG  322
J  91.3% (42/46)    IGHJ5*02     6    ------.........C................C.......C......C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_312471

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           319     2e-89
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGTCCCTC	ACGGTGAC	CTAGATT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGACGTCCCTCACGGTGACCTAGATTCC	ARDVPHGDLDS	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	125	24	19	5	0	79.2
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	232	218	14	0	94


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  S  T  F  S  S  F  W  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  R  I  
                    Query_3646   16   GTGCAGCCTCTGGATCCACCTTCAGTAGCTTCTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGAGTGGGTCTCACGCATTA  105
V  94.0% (218/232)  IGHV3-74*01  65   ...............T..............A.........................................T............T....  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      T  V  D  G  S  G  T  V  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  
                    Query_3646   106  CTGTTGATGGCAGTGGCACAGTCTATGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGTTGTATCTGC  195
V  94.0% (218/232)  IGHV3-74*01  155  A.AG......G...A.....AG...C......................................................C.........  244
                                      N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------CDR3-IMGT----------->             
                                      Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  V  P  H  G  D  L  D  S  W  G  Q  G  
                    Query_3646   196  AAATGAACAGTCTGAGAGCCGACGACACGGCTGTGTATTACTGTGCAAGAGACGTCCCTCACGGTGACCTAGATTCCTGGGGCCAGGGAA  285
V  94.0% (218/232)  IGHV3-74*01  245  ......................G.............................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (8/8)     IGHD4-17*01  6    ------------------------------------------------------------........----------------------  13
J  100.0% (36/36)   IGHJ5*02     16   ---------------------------------------------------------------------------...............  30

                                                           
                                      T  L  V  T  V  S  S  
                    Query_3646   286  CCCTGGTCACCGTCTCCTCAG  306
J  100.0% (36/36)   IGHJ5*02     31   .....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_267404

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           349     2e-98
IGHD2-21*02                                                                                           18.0    0.61 
IGHJ1*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTCACAGTATTGTGGCGC	TGGCGACTGCTA	CGCCTCC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCACAGTATTGTGGCGCTGGCGACTGCTACGCCTCCGCTGAGTACTTCCAGCAC	ARHSQYCGAGDCYASAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3647   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*08  49   .............................................T..........C.................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_3647   91   TGGATTGGGTATATCTATTCCAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGTTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*08  139  ...................A...............C...................................AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       H  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  S  Q  Y  C  G  A  G  D 
                    Query_3647   181  CACTTCTCCCTGACCCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATTCACAGTATTGTGGCGCTGGCGAC  270
V  95.5% (234/245)  IGHV4-59*08  229  ..G..........AG....G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD2-21*02  13   -----------------------------------------------------------------------------------...T...  19

                                      MGT-------------------------->                                  
                                       C  Y  A  S  A  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3647   271  TGCTACGCCTCCGCTGAGTACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  334
D  91.7% (11/12)    IGHD2-21*02  20   .....-----------------------------------------------------------  24
J  96.2% (50/52)    IGHJ1*01     1    ------------.....A.........................................C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_312473

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_3648   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_3648   91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y 
                    Query_3648   181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTAC  270
V  91.4% (223/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD2-2*01   8    ---------------------------------------------------------------------........T........----  24
J  88.5% (46/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_3648   271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  318
J  88.5% (46/52)    IGHJ6*02     15   ...GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_312474

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           260     1e-71
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	93	21	0	81.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	205	39	0	84


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_3649   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  84.0% (205/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_3649   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  84.0% (205/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_3649   181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACGTAT  270
V  84.0% (205/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_3649   271  GTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    ---------------------------------...G....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_312475

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            350     9e-99
IGHD2-8*02                                                                                            21.8    0.044
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAA	AGTCACGGGGGGG	AGGATATGGTACTG	ATAATAAGTACTAGTC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAAGTCACGGGGGGGAGGATATGGTACTGATAATAAGTACTAGTCACTTCTACTACGGTCTGGACGTC	AKSHGGEDMVLIISTSHFYYGLDV	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  E  A  S  G  F  T  F  S  D  F  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3650  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAGTGATTTTGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  95.2% (236/248)  IGHV3-9*01  47   .....................C...................GA.....A.........................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  S  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3650  91   AGTGGGTCTCAAGTATTAGTTGGAATAGTGGCAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (236/248)  IGHV3-9*01  137  ...........G...................T..........................................................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><---------------------------
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  L  Y  Y  C  A  K  S  H  G  G  E  D  M  
                    Query_3650  181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGCGAGTTGACGACACGGCCTTGTACTATTGTGCAAAAAGTCACGGGGGGGAGGATATGG  270
V  95.2% (236/248)  IGHV3-9*01  227  ..........G.....................A...C...G..............T..C.........----------------------  294
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD2-8*02  1    ---------------------------------------------------------------------------------.......T.  9

                                     ----CDR3-IMGT------------------------------>                              
                                     V  L  I  I  S  T  S  H  F  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_3650  271  TACTGATAATAAGTACTAGTCACTTCTACTACGGTCTGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTCC  344
D  92.9% (13/14)    IGHD2-8*02  10   .....---------------------------------------------------------------------  14
J  94.3% (50/53)    IGHJ6*02    7    ---------------------...A..........A................A.....................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_312476

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           291     5e-81
IGHD3-22*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAC	ATAGTACTGG	CCGAATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATAGTACTGGCCGAATCATTGACTAT	ARAHSTGRIIDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G 
                    Query_3651   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  87.2% (218/250)  IGHV4-31*01  49   ...................C................A...G.A....TGG..A...C....G.............CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  Y  I  Y  H  V  E  S  T  S  R  N  P  S  L  K  S  Q  L  T  I  S  L  D  P  S 
                    Query_3651   91   CTGGAGTGGATGGGATACATCTATCACGTTGAGAGCACCTCCCGCAACCCGTCCCTCAAGAGTCAACTTACCATTTCACTCGACCCGTCT  180
V  87.2% (218/250)  IGHV4-31*01  139  ...........T..G.........T..AG..G........A.TA....................T.G.......A...G.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  S  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  S  T  G  R  I 
                    Query_3651   181  AAGAGCCAGTTCTCCCTAAAACTGACCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCACATAGTACTGGCCGAATC  270
V  87.2% (218/250)  IGHV4-31*01  229  ....A............G..G....G....G.......................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-22*01  12   -------------------------------------------------------------------------......G...-------  21

                                      -------->                                  
                                       I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3651   271  ATTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.6% (41/42)    IGHJ4*02     7    -.......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_312477

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     4e-93
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_3652   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  S  L  K  P  R  V  T  I  S  L  D  T  S  K  N 
                    Query_3652   91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCTCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-59*08  139  ...A....G......T.......T..............................AG............A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G 
                    Query_3652   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGT  270
V  93.4% (228/244)  IGHV4-59*08  229  .............A......C..........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_3652   271  TATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  334
J  94.2% (49/52)    IGHJ1*01     1    ------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_312478

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           333     1e-93
IGHD1-26*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	AGCA	AGTGGGAGC	CTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAAGCAAGTGGGAGCCTTATGACTCC	ARSKWEPYDS	237	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	21	3	0	87.5
FR3-IMGT	123	236	114	110	4	0	96.5
CDR3-IMGT (germline)	237	242	6	6	0	0	100
Total	N/A	N/A	231	222	9	0	96.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  N  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I 
                    Query_3653   12   TGTGCAGCCTCTGGATTCAACTTCAGTACCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGTATT  101
V  96.1% (222/231)  IGHV3-74*01  64   ...................C........G.............................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       K  S  D  G  S  S  G  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 
                    Query_3653   102  AAAAGTGATGGGAGTAGCGGAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTG  191
V  96.1% (222/231)  IGHV3-74*01  154  ..T...............AC..G...................................................................  243
                                       N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 

                                      --------------------------------------------><----------CDR3-IMGT--------->               
                                       H  M  N  N  L  R  A  E  D  T  A  L  Y  Y  C  A  R  S  K  W  E  P  Y  D  S  W  G  Q  G  T 
                    Query_3653   192  CACATGAACAATCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCAAGAAGCAAGTGGGAGCCTTATGACTCCTGGGGCCAGGGAACC  281
V  96.1% (222/231)  IGHV3-74*01  244  ..A.......G......................G.................---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (9/9)     IGHD1-26*01  6    -------------------------------------------------------.........--------------------------  14
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------.....A................  29

                                                         
                                       L  V  T  V  S  S  
                    Query_3653   282  CTGGTCACCGTCTCCTCAG  300
J  97.6% (40/41)    IGHJ4*02     30   ...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_312479

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         335     4e-94
IGHD2-21*02                                                                                           16.1    2.1  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCAAA	TGGTGACT	TAC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATTCAAATGGTGACTTACACTAC	ARDSNGDLHY	246	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  I  S  S  G  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_3654     4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATCAGCAGTGGTAATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  92.8% (232/250)  IGHV4-30-4*01  50   .....TCC...A....CA.............................G..........................................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  S  S  S  G  T  T  Y  Y  N  P  S  L  E  S  R  I  T  I  S  L  D  T  S  
                    Query_3654     94   TGGAGTGGATTGGGTACATCTCTTCCAGTGGGACCACCTACTACAACCCCTCCCTCGAGAGTCGAATTACCATATCGCTAGACACGTCCA  183
V  92.8% (232/250)  IGHV4-30-4*01  140  .....................A..A........G...............G......A........G..........AG............  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                        K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  N  G  D  L  H  
                    Query_3654     184  AGAACCAGTTCTCCCTGAATCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGATTCAAATGGTGACTTACACT  273
V  92.8% (232/250)  IGHV4-30-4*01  230  ...................G....G...............A.............................--------------------  299
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD2-21*02    13   ----------------------------------------------------------------------------........------  20
J  100.0% (39/39)   IGHJ4*02       10   ---------------------------------------------------------------------------------------...  12

                                        ->                                  
                                        Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3654     274  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (39/39)   IGHJ4*02       13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_126402

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTTGTGG	TACTCTGGTTCGGGGAGT	AAAACCCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTTGTGGTACTCTGGTTCGGGGAGTAAAACCCATTTTGACTAC	ARGLWYSGSGSKTHFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_3655   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .............................................................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3655   91   CTGGAGTGGATTGGGTACATTTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATTTCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ....................C.....................................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  W  Y  S  G  S 
                    Query_3655   181  AAGAACCAGTTCTCCCTGAAGCTGCGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGTTTGTGGTACTCTGGTTCG  270
V  98.4% (246/250)  IGHV4-31*03  229  ........................A.............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  5    ------------------------------------------------------------------------------....A.......  16

                                      MGT-------------------->                                  
                                       G  S  K  T  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3655   271  GGGAGTAAAACCCATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  94.4% (17/18)    IGHD3-10*01  17   ......----------------------------------------------------  22
J  100.0% (43/43)   IGHJ4*02     6    ---------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_126403

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           403     1e-114
IGHD3-3*01                                                                                            14.1    8.9   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	261	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	23	1	0	95.8
FR2-IMGT	75	125	51	51	0	0	100
CDR2-IMGT	126	146	21	21	0	0	100
FR3-IMGT	147	260	114	112	2	0	98.2
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	263	5	0	98.1


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  
                    Query_3656   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCC  90
V  98.1% (263/268)  IGHV4-34*01  26   ........T.......T.......................................................A.................  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_3656   91   AGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCA  180
V  98.1% (263/268)  IGHV4-34*01  116  ..........................................................................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  A  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_3656   181  TATCAGCAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCG  270
V  98.1% (263/268)  IGHV4-34*01  206  ......T...............................................................G.................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  

                                      ----------CDR3-IMGT------------------>                                  
                                      A  G  G  L  F  I  F  V  A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3656   271  CAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
D  100.0% (7/7)     IGHD3-3*01   9    --------------.......---------------------------------------------------  15
J  100.0% (43/43)   IGHJ4*02     6    -----------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_126405

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           291     5e-81
IGHD3-3*01                                                                                            23.8    0.010
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	GGAGTGGTTATT	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGGAGTGGTTATTGGCCTACTTTGACTAC	AKEEWLLAYFDY	237	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	16	8	0	66.7
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	17	7	0	70.8
FR3-IMGT	123	236	114	108	6	0	94.7
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	232	209	23	0	90.1


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  F  S  H  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  G  I  
                    Query_3657   13   GTGCAGCCTCTGGATTCTTTTCTCATAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCGCAGGTATCA  102
V  90.1% (209/232)  IGHV3-23*01  65   .................ACC.T.AGC..C...................................................T...C...T.  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  N  S  P  E  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  N  T  L  Y  L  
                    Query_3657   103  GTAATAGTCCTGAAAGCACATACTACGCTGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAGGAACACCCTGTATCTGC  192
V  90.1% (209/232)  IGHV3-23*01  155  ..GG....GG..GT..............A...........................................A......G..........  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------CDR3-IMGT------------>          
                                      Q  M  N  G  V  R  A  E  D  T  A  V  Y  Y  C  A  K  E  E  W  L  L  A  Y  F  D  Y  W  G  Q  
                    Query_3657   193  AAATGAACGGCGTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAAGAGGAGTGGTTATTGGCCTACTTTGACTACTGGGGCCAGG  282
V  90.1% (209/232)  IGHV3-23*01  245  ........A..C......................A.................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (12/12)   IGHD3-3*01   15   ----------------------------------------------------............--------------------------  26
J  91.5% (43/47)    IGHJ4*02     2    -------------------------------------------------------------------.......................  24

                                                              
                                      G  T  L  V  S  V  S  S  
                    Query_3657   283  GGACCCTGGTCAGTGTTTCCTCAG  306
J  91.5% (43/47)    IGHJ4*02     25   .A..........CC..C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_126406

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           410     1e-116
IGHD3-10*01                                                                                           12.2    37    
IGHJ2*01                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGCCGCAGGGATGGCAAAA	TTCGGG	TG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCCGCAGGGATGGCAAAATTCGGGTGTACTGGTACTTCGGTCTC	ARGGRRDGKIRVYWYFGL	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_3658   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCAGGAGGCACCTTCAGCAGCTA  90
V  95.2% (276/290)  IGHV1-69*06  6    .....................................................................T....................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  V  P  V  L  R  T  A  N  Y  A  Q
                    Query_3658   91   TGTTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGGGGATCGTCCCTGTCCTTCGTACAGCGAACTACGCACA  180
V  95.2% (276/290)  IGHV1-69*06  96   ..C.....G..........................................A......A.....A..T..G.......A...........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  T  A  D  K  S  R  S  T  V  Y  M  E  L  S  S  L  R  A  E  D  T  A
                    Query_3658   181  GAAGTTCCAGGACAGAGTCACGATTACCGCGGACAAATCCAGGAGTACAGTCTACATGGAGCTGAGCAGCCTGAGAGCTGAGGACACGGC  270
V  95.2% (276/290)  IGHV1-69*06  186  ...........G.............................C...C....C.........................T.............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  G  G  R  R  D  G  K  I  R  V  Y  W  Y  F  G  L  W  G  R  G  T  L  V  T
                    Query_3658   271  CGTGTATTACTGTGCGAGAGGAGGCCGCAGGGATGGCAAAATTCGGGTGTACTGGTACTTCGGTCTCTGGGGCCGTGGCACCCTGGTCAC  360
V  95.2% (276/290)  IGHV1-69*06  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-10*01  13   -----------------------------------------......-------------------------------------------  18
J  96.2% (50/52)    IGHJ2*01     2    -------------------------------------------------.............A...........................  42

                                                 
                                        V  S  S  
                    Query_3658   361  CGTCTCCTCAG  371
J  96.2% (50/52)    IGHJ2*01     43   T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_126407

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGATCGGGGAAATATTAT	GCTCAAA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGATCGGGGAAATATTATGCTCAAAAC	ARGHSYGSGKYYAQN	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3659   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ...............................G.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3659   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGGGTTACCATATCAGTTGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ........................................A........................A..............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  F  L  R  L  S  P  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  S  Y  G  S  G 
                    Query_3659   181  AAGAACCAGTTCTTCTTGAGGCTGAGCCCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTCCTATGGATCGGGG  270
V  96.4% (241/250)  IGHV4-31*03  229  .............C.C...A.......T..........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD3-10*01  7    -----------------------------------------------------------------------------......T......  19

                                      ----------------->                                  
                                       K  Y  Y  A  Q  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3659   271  AAATATTATGCTCAAAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  86.4% (19/22)    IGHD3-10*01  20   .GT......-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_172228

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD6-6*01                                                                                            14.1    9.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTC	ATTREQLVPIFDF	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	70	1	0	98.6
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	106	8	0	93
CDR3-IMGT (germline)	290	293	4	4	0	0	100
Total	N/A	N/A	288	270	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  L  S  S  
                    Query_3660   6    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATTTCCTGTAAGGGTTCTGGATACAGATTAAGCAGTT  95
V  93.8% (270/288)  IGHV5-51*01  5    .......................................................C.......................C..T.C...C.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  E  T  K  Y  S  
                    Query_3660   96   ATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCGTCTATCCTGGTGACTCTGAGACCAAATACAGCC  185
V  93.8% (270/288)  IGHV5-51*01  95   .C.......G..........................................G...A...................T....G........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  E  G  Q  V  T  I  S  A  D  K  A  S  G  T  A  F  L  Q  W  D  S  L  K  A  S  D  T  
                    Query_3660   186  CGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGGCCAGCGGCACCGCCTTCCTGCAGTGGGACAGCCTGAAGGCCTCGGACACCG  275
V  93.8% (270/288)  IGHV5-51*01  185  ........C.............................T...T.A.........A..........AG.......................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><--------------CDR3-IMGT-------------->                                  
                                      A  M  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_3660   276  CCATGTATTACTGTGCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  362
V  93.8% (270/288)  IGHV5-51*01  275  ..................---------------------------------------------------------------------  292
                                      A  M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   --------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    --------------------------------------------.......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_25480

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGGTTT	TAGTAGTGCTTATTACT	GGCTTAAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGTTTTAGTAGTGCTTATTACTGGCTTAATTACTTTGACTGC	AKGFSSAYYWLNYFDC	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  Y  A  T  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3661   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAATTATGCCACGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-23*01  47   ..........................................G..GC.......T..G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  A  G  T  N  T  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_3661   91   AGTGGGTCTCAGGTATTAGTGGTGCTGGTACTAACACATACTACGCAGACTCCGTGCAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.9% (232/247)  IGHV3-23*01  137  ............C..........AG....GG..G......................A.................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  G  F  S  S  A  Y  Y  
                    Query_3661   181  AGAACACGCTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTTCTGTGCGAAGGGTTTTAGTAGTGCTTATTACT  270
V  93.9% (232/247)  IGHV3-23*01  227  ............A.......................................A....A.........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.1% (16/17)    IGHD3-22*01  13   -------------------------------------------------------------------------........G........  29

                                      T------------------>                                  
                                      W  L  N  Y  F  D  C  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_3661   271  GGCTTAATTACTTTGACTGCTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  324
J  95.7% (44/46)    IGHJ4*02     3    --------..........A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_32370

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           10.3    131   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_3662   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  95.2% (276/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  F  A  Q 
                    Query_3662   92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTTTGCACAG  181
V  95.2% (276/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3662   182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_3662   272  ATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  95.2% (276/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_213715

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           277     9e-77
IGHD6-19*01                                                                                           10.3    121  
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	ATCGCATCTCAG	GCAGT	TGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAATCGCATCTCAGGCAGTTGTTCTACTACGACGGTATGGACGTC	AKESHLRQLFYYDGMDV	237	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	17	7	0	70.8
FR3-IMGT	123	236	114	99	15	0	86.8
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	233	205	28	0	88


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  N  L  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  T 
                    Query_3663   12   TGTGCAGCCTCTGGATTCACCTTTAACCTCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCTTCTACT  101
V  88.0% (205/233)  IGHV3-23*01  64   .........................G.AG...........G..........................................AG...T.  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  G  G  I  S  P  R  Y  A  D  S  F  K  G  R  F  T  I  S  R  D  N  S  K  N  M  L  W  L 
                    Query_3663   102  AGTAGTGGTGGTATTAGTCCACGCTACGCCGACTCCTTCAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACATGCTGTGGCTG  191
V  88.0% (205/233)  IGHV3-23*01  154  ...G..A.....GG...CA..TA......A......G.G........................................C.....AT...  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------------CDR3-IMGT---------------
                                       H  M  T  S  L  T  V  D  D  T  A  I  Y  Y  C  A  K  E  S  H  L  R  Q  L  F  Y  Y  D  G  M 
                    Query_3663   192  CATATGACCAGCCTGACAGTCGACGACACGGCCATTTATTACTGTGCGAAAGAATCGCATCTCAGGCAGTTGTTCTACTACGACGGTATG  281
V  88.0% (205/233)  IGHV3-23*01  244  ..A....A........G..C...G.........G.A.................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (5/5)     IGHD6-19*01  8    -----------------------------------------------------------------.....--------------------  12
J  98.2% (54/55)    IGHJ6*02     8    --------------------------------------------------------------------------.......T........  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3663   282  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  98.2% (54/55)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_213714

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           352     3e-99
IGHD1-1*01                                                                                            12.2    32   
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCCTTCGAGGAAAC	TACAAC	N/A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCTTCGAGGAAACTACAACGATGCTTTTGATGTC	ARLLRGNYNDAFDV	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3664   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.2% (237/249)  IGHV4-31*03  49   ...............................G.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3664   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGGGTTACCATATCAGTAGACACGTCC  180
V  95.2% (237/249)  IGHV4-31*03  139  ........................................A........................A.......................T  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  K  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  L  R  G  N  Y  N 
                    Query_3664   181  AAGAAACAATTCTCCCTGAACCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTTCTGTGCGAGACTCCTTCGAGGAAACTACAAC  270
V  95.2% (237/249)  IGHV4-31*03  229  .....C..G...........G..............T..............C..G....A..........---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-1*01   3    ------------------------------------------------------------------------------------......  8

                                      -------------->                                  
                                       D  A  F  D  V  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3664   271  GATGCTTTTGATGTCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  319
J  98.0% (48/49)    IGHJ3*01     2    ..............................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_213717

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           353     9e-100
IGHD4-17*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGTGG	TACGGTGACTAC	TC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGTGGTACGGTGACTACTCTGATGGTTTTGATATC	AKPWYGDYSDGFDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  N  Y  A  M  A  W  V  R  Q  A  P  G  K  G  L  
                    Query_3665   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTTAGCAACTATGCCATGGCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (237/248)  IGHV3-23*01  47   ...................................A.........G..........AG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  G  S  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3665   91   AGTGGGTCTCATCTATTAGAGGTAGTGGTAGTAATACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.6% (237/248)  IGHV3-23*01  137  ...........G.......T.........G...GC.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  P  W  Y  G  D  Y  S  
                    Query_3665   181  AGAACACGCTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATATTACTGTGCGAAACCGTGGTACGGTGACTACTCTG  270
V  95.6% (237/248)  IGHV3-23*01  227  .................C................................G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD4-17*01  5    --------------------------------------------------------------------------............----  16
J  98.0% (49/50)    IGHJ3*02     1    ----------------------------------------------------------------------------------------..  2

                                      ------------->                                  
                                      D  G  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3665   271  ATGGTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  318
J  98.0% (49/50)    IGHJ3*02     3    ...C............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_213716

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           268     6e-74
IGHD3-16*01                                                                                           18.0    0.61 
IGHJ3*01                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACAACG	TATGCTTAT	GTCAGTGCTTGGGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAACGTATGCTTATGTCAGTGCTTGGGGATGATGCTTTTGATGTC	ARRQRMLMSVLGDDAFDV	246	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	23	7	0	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	97	17	0	85.1
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	210	39	0	84.3


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  V  T  T  T  R  Y  S  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_3666   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCGTCACCACTACTAGATACTCCTGGGGTTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  84.3% (210/249)  IGHV4-39*01  50   .....TCC...A..................G....A...G..G..G...T....A......C..........................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Q  M  F  Y  G  G  S  T  Y  Q  N  P  S  L  N  S  R  V  T  V  S  V  D  P  S  
                    Query_3666   94   TGGAATGGATTGGGCAGATGTTCTATGGTGGGAGCACGTACCAGAACCCGTCGCTGAATAGTCGAGTCACCGTGTCCGTTGACCCGTCCA  183
V  84.3% (210/249)  IGHV4-39*01  140  ....G.........AGT..C.AT...A..........C...T.C........C..C..G............A.A.....A...A......  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  S  Q  F  F  L  N  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  R  Q  R  M  L  M  S  
                    Query_3666   184  AGAGTCAGTTCTTCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCTGTATATTATTGTGCGAGACGACAACGTATGCTTATGTCAG  273
V  84.3% (210/249)  IGHV4-39*01  230  ...AC.......C......G....G...................A.......G.....C..........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD3-16*01  26   ----------------------------------------------------------------------------.........-----  34

                                      IMGT--------------------->                                  
                                      V  L  G  D  D  A  F  D  V  W  G  Q  G  T  G  V  T  V  S  S  
                    Query_3666   274  TGCTTGGGGATGATGCTTTTGATGTCTGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  333
J  96.0% (48/50)    IGHJ3*01     1    ----------...............................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_306220

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           405     4e-115
IGHD3-3*01                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTCCTG	TACGATTTTTGGAATGGT	CAGCAGTACTTTTTCAAGGGTTTA	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCTGTACGATTTTTGGAATGGTCAGCAGTACTTTTTCAAGGGTTTAGACGTC	ARVLYDFWNGQQYFFKGLDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  F
                    Query_3667   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTT  90
V  94.8% (274/289)  IGHV5-51*03  6    .........................................................................................A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  L  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  G  P
                    Query_3667   91   CTGGCTCGGCTGGGTGCGCCAGATGCCCGGAAAAGGCCTGGAGTGGATGGGCGTCATCTACCCTGGTGACTCTGATACCAGATACGGCCC  180
V  94.8% (274/289)  IGHV5-51*03  96   ....A.........................G....................GA.......T........................A....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  G  L  R  A  S  D  T  A
                    Query_3667   181  GTCCTTCCAGGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTATCTTCACTGGAGCGGCCTGAGGGCCTCGGACACCGC  270
V  94.8% (274/289)  IGHV5-51*03  186  .........A..................................G.........C..G..G......A......A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  F  C  A  R  V  L  Y  D  F  W  N  G  Q  Q  Y  F  F  K  G  L  D  V  W  G  Q  G  T  S
                    Query_3667   271  CATGTATTTCTGTGCGAGAGTCCTGTACGATTTTTGGAATGGTCAGCAGTACTTTTTCAAGGGTTTAGACGTCTGGGGCCAAGGGACTTC  360
V  94.8% (274/289)  IGHV5-51*03  276  ........A..........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  94.4% (17/18)    IGHD3-3*01   5    -------------------------.............G....-----------------------------------------------  22
J  94.9% (37/39)    IGHJ6*02     24   -------------------------------------------------------------------....................CA.  46

                                                      
                                        V  T  V  S  S 
                    Query_3667   361  GGTCACCGTCTCCTCA  376
J  94.9% (37/39)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_191447

Length=413
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           385     5e-109
IGHD2-2*01                                                                                            33.4    2e-05 
IGHJ2*01                                                                                              98.7    8e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGAGAGGGACT	AGGATATTGTAGTAGTA	GTGCCGGATGCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGAGAGGGACTAGGATATTGTAGTAGTAGTGCCGGATGCCACTGGTACTTCGATCTC	AREGEGLGYCSSSAGCHWYFDL	290	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	69	2	0	97.2
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	46	5	0	90.2
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	103	11	0	90.4
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	292	269	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  E  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  R  S  
                    Query_3668   6    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGGAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGGAGTT  95
V  92.1% (269/292)  IGHV1-69*01  5    ...................G............A....................................................C..C.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  A  I  S  W  L  R  Q  A  P  G  Q  G  F  E  W  M  G  G  I  I  P  I  F  G  T  P  N  N  A  
                    Query_3668   96   ATGCTATCAGTTGGCTACGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGAGGAATCATTCCTATCTTTGGTACCCCAAATAACGCAC  185
V  92.1% (269/292)  IGHV1-69*01  95   ..........C...G.G.....................C................G.....C..............AG....CT......  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  N  F  Q  G  R  V  T  I  T  A  D  E  N  T  A  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  
                    Query_3668   186  AGAATTTCCAGGGCAGAGTCACGATTACCGCGGACGAAAACACGGCCACAGTTTACATGGAACTGAGCAGCCTGAGATCTGAGGACACGG  275
V  92.1% (269/292)  IGHV1-69*01  185  ....G.................................TC....AG.....CC........G............................  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><----------------------------CDR3-IMGT--------------------------->          
                                      A  V  Y  Y  C  A  R  E  G  E  G  L  G  Y  C  S  S  S  A  G  C  H  W  Y  F  D  L  W  G  R  
                    Query_3668   276  CCGTGTACTACTGTGCGAGAGAGGGAGAGGGACTAGGATATTGTAGTAGTAGTGCCGGATGCCACTGGTACTTCGATCTCTGGGGCCGTG  365
V  92.1% (269/292)  IGHV1-69*01  275  .......T..............--------------------------------------------------------------------  296
                                      A  V  Y  Y  C  A  R                                                                       
D  100.0% (17/17)   IGHD2-2*01   1    ----------------------------------.................---------------------------------------  17
J  100.0% (51/51)   IGHJ2*01     3    ---------------------------------------------------------------...........................  29

                                                              
                                      G  T  L  V  T  V  S  S  
                    Query_3668   366  GCACCCTGGTCACTGTCTCCTCAG  389
J  100.0% (51/51)   IGHJ2*01     30   ........................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40498920


Query= Query_213713

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           338     5e-95
IGHD1-26*01                                                                                           10.3    123  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAAGCTCTTCGGTTA	ATAGT	N/A	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCAAGCTCTTCGGTTAATAGTTACGACTACTACGGTATGGACGTC	ARSSSSVNSYDYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3669   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAGTAATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGACTGG  90
V  93.5% (232/248)  IGHV3-48*03  47   ....................................C...C....G.................................G.....G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  A  V  F  I  S  V  S  G  R  N  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3669   91   AGTGGGCTGTATTCATTAGTGTTAGTGGTAGGAACATATACTACGCGGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  93.5% (232/248)  IGHV3-48*03  137  ......T.TC..A.......AG.........T.C............A.................A.........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  S  S  S  V  N  S  
                    Query_3669   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCTGTTTATTACTGTGCGAGATCAAGCTCTTCGGTTAATAGTT  270
V  93.5% (232/248)  IGHV3-48*03  227  ........................................G...........................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  4    ------------------------------------------------------------------------------------.....-  8
J  94.7% (54/57)    IGHJ6*02     6    -----------------------------------------------------------------------------------------.  6

                                      GT-------------------->                                 
                                      Y  D  Y  Y  G  M  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_3669   271  ACGACTACTACGGTATGGACGTCTGGGGCCGGGGGACCACGGTCACCGTCTCCTCA  326
J  94.7% (54/57)    IGHJ6*02     7    ..T...........................AA........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_306223

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            375     2e-106
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	250	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	135	27	27	0	0	100
FR3-IMGT	136	249	114	113	1	0	99.1
CDR3-IMGT (germline)	250	256	7	7	0	0	100
Total	N/A	N/A	256	248	8	0	96.9


Alignments

                                     <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                      T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  I  R  Q  S  P  S  R  G 
                    Query_3670  1    ACCCTGTCCCTCACCTGCGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGC  90
V  96.9% (248/256)  IGHV6-1*01  49   .....C..A........T..................G......G....AG........................................  138
                                      T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R  Q  S  P  S  R  G 

                                     -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                      L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R  I  T  I  D  P  D 
                    Query_3670  91   CTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAACCATCGACCCAGAC  180
V  96.9% (248/256)  IGHV6-1*01  139  .................................................................................A........  228
                                      L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R  I  T  I  N  P  D 

                                     --------FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-
                                      T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A  R  G  L  R  S  A 
                    Query_3670  181  ACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGAGGTCTGCGGAGTGCT  270
V  96.9% (248/256)  IGHV6-1*01  229  ............................................................................--------------  304
                                      T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A  R                
J  97.9% (46/47)    IGHJ3*02    4    --------------------------------------------------------------------------------------....  7

                                     -------->                                  
                                      L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3670  271  CTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  313
J  97.9% (46/47)    IGHJ3*02    8    T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_191448

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           394     7e-112
IGHD4-4*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	CTACAGTAACTAC	GGGCGGTCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACAGTAACTACGGGCGGTCATACTACTATGAATAT	ARDYSNYGRSYYYEY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  E  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  R  F  T  K  Y 
                    Query_3671   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGGAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAGGTTTACCAAATAT  91
V  93.4% (271/290)  IGHV1-18*01  7    ..............................A.............................................CC.......GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  T  Y  N  G  Y  T  N  Y  S  Q 
                    Query_3671   92   GGAATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCACTTACAATGGTTACACAAACTATAGTCAG  181
V  93.4% (271/290)  IGHV1-18*01  97   ..T...............................................A.........G...........A...........GCA...  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  I  S  D  D  T  A 
                    Query_3671   182  AGTCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTATATGGAGCTGAGGAGCCTGATATCTGACGACACGGCC  271
V  93.4% (271/290)  IGHV1-18*01  187  .AG..................................................C...................G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       F  Y  F  C  A  R  D  Y  S  N  Y  G  R  S  Y  Y  Y  E  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_3671   272  TTTTATTTCTGTGCGAGAGACTACAGTAACTACGGGCGGTCATACTACTATGAATATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  361
V  93.4% (271/290)  IGHV1-18*01  277  G.G....A............----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (13/13)   IGHD4-4*01   4    --------------------.............---------------------------------------------------------  16
J  93.8% (45/48)    IGHJ4*02     1    -------------------------------------------......T...C..C.................................  47

                                       
                                       
                    Query_3671   362  G  362
J  93.8% (45/48)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_191449

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           310     1e-86
IGHD4-17*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	GACTACG	TAGAGATGGCTTCGAGAACCAATAAGGGAGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTACGTAGAGATGGCTTCGAGAACCAATAAGGGAGATTTGACTAC	ARLRRDGFENQ*GRFDY	237	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	236	114	101	7	6	88.6
CDR3-IMGT (germline)	237	240	4	4	0	0	100
Total	N/A	N/A	246	224	16	6	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3672   1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTGGATTCACCTTTAGTAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (224/246)  IGHV3-23*01  47   .....................C..C..................C..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  T  G  G  S  T  F  Y  A  A  S  V  K  G  R  Y  T  I  S  R  D  N  S  
                    Query_3672   91   AGTGGGTCTCAGGTATTAGCGGCACTGGTGGTAGTACATTCTACGCGGCCTCCGTGAAGGGCCGGTACACCATCTCCAGAGACAATTCCA  180
V  91.1% (224/246)  IGHV3-23*01  137  ............C......T..T.G.........C....A......A.A.................T.......................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K        V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  L  R  R  D  G  F  E  
                    Query_3672   181  A------GGTCTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAGACTACGTAGAGATGGCTTCGAGA  264
V  91.1% (224/246)  IGHV3-23*01  227  .GAACAC.C.G.......................................G...............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD4-17*01  2    ------------------------------------------------------------------.......-----------------  8

                                      GT-------------------->                                  
                                      N  Q  *  G  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3672   265  ACCAATAAGGGAGATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_213719

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           343     2e-96
IGHD6-19*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCG	GCAGTGGCTGGT	GCGGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCGGCAGTGGCTGGTGCGGGATTGACTAC	AKDRGSGWCGIDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  R  N  Y  W  S  W  I  R  E  T  P  G  K  G  R  E 
                    Query_3673   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGAAACTACTGGAGCTGGATCCGGGAGACCCCAGGGAAGGGACGAGAG  90
V  94.7% (232/245)  IGHV4-59*01  49   .........................................T..TT....................C..C...............TG...  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_3673   91   TGGATTGGGTATATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-59*01  139  ....................C...................................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  D  R  G  S  G  W  C  G  I 
                    Query_3673   181  CAGTTCTCCCTGAGGCTGAACTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAAAGATCGCGGCAGTGGCTGGTGCGGGATT  270
V  94.7% (232/245)  IGHV4-59*01  229  .............A.....G...........................G.............G...-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD6-19*01  8    ----------------------------------------------------------------------............--------  19
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_3673   271  GACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  310
J  97.6% (41/42)    IGHJ4*02     9    ...................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_213718

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            360     1e-101
IGHD3-10*01                                                                                           10.3    121   
IGHJ6*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TATATATCCTCTCTACCG	CGGGG	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATATATATATCCTCTCTACCGCGGGGGGTATGGACCTT	AKDIYILSTAGGMDL	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	252	10	10	0	0	100
Total	N/A	N/A	252	241	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  K  A  S  G  F  T  F  N  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3674   1    GGTCCCTGAGACTCTCCTGTAAAGCCTCTGGATTCACCTTTAATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  95.6% (241/252)  IGHV3-9*01   47   ....................GC...................G................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  T  W  N  S  G  S  M  G  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_3674   91   AGTGGGTCTCAGGTATTACTTGGAATAGTGGTAGTATGGGGTATGCGGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  95.6% (241/252)  IGHV3-9*01   137  ..................G...............C..A..C..............................A..................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  K  D  I  Y  I  L  S  T  
                    Query_3674   181  AGAACTCCCTGTATCTCCAAATGAACAGTCTGAGAGTTGAGGACACGGCCTTATATTACTGTGCAAAAGATATATATATCCTCTCTACCG  270
V  95.6% (241/252)  IGHV3-9*01   227  ................G...................C...............G...................------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                      ---------------->                                 
                                      A  G  G  M  D  L  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_3674   271  CGGGGGGTATGGACCTTTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  320
D  100.0% (5/5)     IGHD3-10*01  15   .....---------------------------------------------  19
J  93.3% (42/45)    IGHJ6*02     18   -----.........G.C......................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_59969

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           420     7e-120
IGHD6-19*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCCTTAGGGTC	TATAGCAGTGGCTGGTAC	TC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCCTTAGGGTCTATAGCAGTGGCTGGTACTCTTGGCTAC	ARVPLGSIAVAGTLGY	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	282	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_3675   1    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  90
V  95.6% (282/295)  IGHV1-18*01  1    .....T.....G..............................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  V  F  N  G  N  T  R  H 
                    Query_3675   91   AATTATGGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCAGCGTTTTCAATGGTAACACAAGACAT  180
V  95.6% (282/295)  IGHV1-18*01  91   .GC...........C.........................................A..........C..A..............ACT..  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  L  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  N  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_3675   181  GCACTGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAACACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  270
V  95.6% (282/295)  IGHV1-18*01  181  ....A............................................G........................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  V  P  L  G  S  I  A  V  A  G  T  L  G  Y  W  G  Q  G  T  L  V  I 
                    Query_3675   271  ACGGCCGTGTATTACTGTGCGAGAGTTCCCTTAGGGTCTATAGCAGTGGCTGGTACTCTTGGCTACTGGGGCCAGGGAACCCTGGTCATT  360
V  95.6% (282/295)  IGHV1-18*01  271  .........................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (18/18)   IGHD6-19*01  4    --------------------------------------..................----------------------------------  21
J  92.9% (39/42)    IGHJ4*02     7    ----------------------------------------------------------...A..........................CC  38

                                                
                                       V  S  S  
                    Query_3675   361  GTCTCCTCAG  370
J  92.9% (39/42)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_59968

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           324     8e-91
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAC	TACTATGGTTCGGGGAGT	CGA	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTACTATGGTTCGGGGAGTCGAACTATGACTAC	ARGLLWFGESNYDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  D  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3676   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTACCTTCAGTCGATATGATATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-48*03  47   ..................................C.........A.T.....A.....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  Y  I  S  G  G  G  N  T  I  Y  Y  A  D  S  I  K  G  R  F  T  V  S  R  D  N  A  
                    Query_3676   91   AGTGGGTTGCATATATTAGTGGTGGTGGCAACACCATATACTACGCAGACTCTATAAAGGGCCGATTCACCGTATCCAGAGATAACGCCA  180
V  91.6% (228/249)  IGHV3-48*03  137  ........T....C......A..A....T.GT.....................G.G...............A.C........C.......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  I  Y  Y  C  A  R  G  L  L  W  F  G  E  
                    Query_3676   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCTATATATTACTGTGCGAGAGGACTACTATGGTTCGGGGAGT  270
V  91.6% (228/249)  IGHV3-48*03  227  ....................................C...G.........G.T................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-10*01  5    ------------------------------------------------------------------------..................  22

                                      ------------->                                
                                      S  N  Y  D  Y  W  G  Q  G  I  L  V  S  V  S  S
                    Query_3676   271  CGAACTATGACTACTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTC  316
J  93.0% (40/43)    IGHJ4*02     4    ---...T....................C.......A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_234903

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            335     4e-94
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGGACTGTGGA	GGTTCGGGGAGTTTTTGTAA	GGACCTCCCTATT	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGACTGTGGAGGTTCGGGGAGTTTTTGTAAGGACCTCCCTATTCGGTATGGACGTC	ARRTVEVRGVFVRTSLFGMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  N  N  H  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3677   1    GGTCCCTGAGACTCTCCTGTGCAGCTTCTGGATTCACCCTCAATAACCATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (231/248)  IGHV3-7*03   47   .........................C............T.T.G..G.T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Y  D  G  S  E  K  Y  S  V  D  S  V  R  G  R  F  T  I  S  R  D  N  P  
                    Query_3677   91   AGTGGGTGGCCAACATAAAATATGATGGAAGTGAGAAATATTCTGTGGACTCGGTGAGGGGCCGATTCACCATCTCCAGAGACAACCCCA  180
V  93.1% (231/248)  IGHV3-7*03   137  ...................GC.A.................C.A.........T....A............................G...  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  R  T  V  E  V  R  G  
                    Query_3677   181  AGAATTCACTGTTTCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTGTATTACTGTGCGAGACGGACTGTGGAGGTTCGGGGAG  270
V  93.1% (231/248)  IGHV3-7*03   227  ....C.......A.......................C...............................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (18/20)    IGHD3-10*01  11   -------------------------------------------------------------------------------...........  21

                                      DR3-IMGT-------------------------->                                 
                                      V  F  V  R  T  S  L  F  G  M  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_3677   271  TTTTTGTAAGGACCTCCCTATTCGGTATGGACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  338
D  90.0% (18/20)    IGHD3-10*01  22   ..A..A...-----------------------------------------------------------  30
J  97.8% (45/46)    IGHJ6*02     17   ----------------------....................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_234902

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           302     3e-84
IGHD3-10*01                                                                                           10.3    116  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGA	CTTCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGACTTCAGGCCTTTGACTCC	ARGGLQAFDS	246	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	221	28	0	88.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  S  G  G  F  Y  W  T  W  I  R  Q  H  P  G  K  G  
                    Query_3678   4    CCCTGAGACTCTCCTGTACTGTGTCTGGTGGCTCCATCAACAGTGGTGGATTCTACTGGACTTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  88.8% (221/249)  IGHV4-31*02  50   .....TCC...A..........C................G.........T.A........GC............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  F  Y  T  G  H  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  L  D  T  S  
                    Query_3678   94   TAGAGTGGATTGGTTACATCTTTTACACTGGACACACCTACTACAATCCGTCCCTCAGGAGTCGACTTACCATTTCACTGGACACATCTG  183
V  88.8% (221/249)  IGHV4-31*02  140  .G...........G.......A.....G...GAG............C..........A.......G.......A...G.A.....G...A  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      E  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  L  Q  A  F  D  
                    Query_3678   184  AGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGGGGACTTCAGGCCTTTGACT  273
V  88.8% (221/249)  IGHV4-31*02  230  ...................G.....C..........................G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  16   ---------------------------------------------------------------------.....----------------  20
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------........  12

                                      ->                                  
                                      S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3678   274  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.7% (43/44)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_234901

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           419     2e-119
IGHD6-13*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	CCAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	ARPRYLGPRQQATENDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  Q  G  S  G  Y  T  F  T  T  Y
                    Query_3679   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTACCACCTA  90
V  96.2% (279/290)  IGHV5-51*01  6    ..........................................G..................A...............G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  P  R  Y  S  P
                    Query_3679   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAGTCATCTATCCTGGTGACTCTGATCCCAGATACAGCCC  180
V  96.2% (279/290)  IGHV5-51*01  96   ........G..........................................GA.......................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3679   181  GTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (279/290)  IGHV5-51*01  186  ......................A................................C..........C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  P  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_3679   271  CATGTATTACTGTGCGAGACCCAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  96.2% (279/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-13*01  8    ---------------------------------------.......--------------------------------------------  14
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_3679   361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_234900

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           319     2e-89
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_3680   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  91.8% (224/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  T  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_3680   91   TGGATTGAGTATATCTACTACAGAGGGACTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (224/244)  IGHV4-59*08  139  .......G.........T.....T....GCA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_3680   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  91.8% (224/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_3680   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_234907

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         294     6e-82
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAC	TACTATGATAGTAGTGGTT	CGTACTCCGAATC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACTACTATGATAGTAGTGGTTCGTACTCCGAATCTGATGCTTTTGATATC	ARHYYDSSGSYSESDAFDI	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  E  V  S  G  F  T  F  S  S  F  G  F  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3681     1    GGTCCCTGAGACTCTCCTGTGAAGTCTCTGGATTCACCTTCAGTTCTTTTGGTTTCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  87.9% (218/248)  IGHV3-30-3*01  47   .....................C..C...................AGC.A..C.A.G..................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  L  I  S  F  D  G  D  N  R  L  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_3681     91   AGTGGGTGGCTCTTATTTCTTTTGATGGAGACAACAGATTATACGCAGACTCCGTGAAGGGGCGATTCACCGTCTCGAGAGACAATTCCA  180
V  87.9% (218/248)  IGHV3-30-3*01  137  ..........AG....A..A.A.......AG...T.A..AC....................C.........A....C.............  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                        K  N  S  L  Y  L  Q  L  N  S  L  T  A  D  D  T  A  V  Y  Y  C  A  R  H  Y  Y  D  S  S  G  
                    Query_3681     181  AGAACTCGCTCTATCTACAACTGAACAGCCTGACAGCTGACGACACGGCTGTCTATTACTGTGCGAGACACTACTATGATAGTAGTGGTT  270
V  87.9% (218/248)  IGHV3-30-3*01  227  .....A....G.....G...A............G......G...........G...............----------------------  294
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (19/19)   IGHD3-22*01    5    -----------------------------------------------------------------------...................  23

                                        -IMGT----------------------->                                
                                        S  Y  S  E  S  D  A  F  D  I  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3681     271  CGTACTCCGAATCTGATGCTTTTGATATCTGGGGCCAGGGGACACTAGTCACCGTCTCTTC  331
J  93.8% (45/48)    IGHJ3*02       1    -------------........................A......A.G..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_227199

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            427     1e-121
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTTCTACGGTATGGAGGTC	ARDRLASYDSTGYRPYFFYGMEV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	282	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_3682   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  96.9% (282/291)  IGHV1-2*04   6    ..................G.............AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_3682   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  96.9% (282/291)  IGHV1-2*04   96   ..........................................................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  R  T  R  D  T  S  I  S  T  A  Y  M  E  L  R  R  L  R  S  E  G  T  A
                    Query_3682   181  GAAGTTTCAGGGCTGGGTCACCAGGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGAAGGCTGAGATCTGAAGGCACGGC  270
V  96.9% (282/291)  IGHV1-2*04   186  .......................T..........................................C..............C.A......  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  F  Y  G  M  E  V  W  G  Q
                    Query_3682   271  CGTGTATTTCTGTGCGAGGGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTTCTACGGTATGGAGGTCTGGGGCCA  360
V  96.9% (282/291)  IGHV1-2*04   276  ........A.........A..---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  92.3% (48/52)    IGHJ6*02     6    ----------------------------------------------------------....A..A............C...........  37

                                                          
                                        G  T  P  V  T  V  
                    Query_3682   361  AGGGACCCCGGTCACCGTCT  380
J  92.3% (48/52)    IGHJ6*02     38   .......A............  57


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_234905

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           358     4e-101
IGHD3-22*01                                                                                           27.6    7e-04 
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	CAGG	ACTATGATAGTAGT	AGGGGGG	ACGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAGGACTATGATAGTAGTAGGGGGGACGATAAGGACGTC	VRQDYDSSRGDDKDV	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3683   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (239/249)  IGHV4-31*03  49   ................................................G.........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  S  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  S  M  S  V  D  T  S 
                    Query_3683   91   CTGGAGTGGATTGGATACATCTATTCCAGTGGGAGTACCTACTACAACCCGTCCCTCAAGAGTCGAGTTAGCATGTCCGTAGACACGTCT  180
V  96.0% (239/249)  IGHV4-31*03  139  ..............G..........A.........C..................................C...A..A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  H  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  Q  D  Y  D  S  S  R 
                    Query_3683   181  AAGAACCACTTCTCCCTGAACCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGTGAGACAGGACTATGATAGTAGTAGG  270
V  96.0% (239/249)  IGHV4-31*03  229  ........G...........G...........................................C....---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (14/14)   IGHD3-22*01  6    -------------------------------------------------------------------------..............---  19

                                      ----------------->                                 
                                       G  D  D  K  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3683   271  GGGGACGATAAGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  321
J  95.7% (45/47)    IGHJ6*02     16   ----...G..T........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_227194

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           369     2e-104
IGHD2-21*02                                                                                           18.0    0.65  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACTG	GGTGGGGACTACTAT	GGTCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTC	VRRLGGDYYGPFEF	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	263	27	0	90.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  E  I  S  C  K  A  Y  G  Y  A  F  N  D  Y
                    Query_3684   1    GCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCCGGGGAGTCTCTGGAGATCTCCTGTAAGGCTTATGGATACGCCTTTAACGACTA  90
V  90.7% (263/290)  IGHV5-51*01  6    ........................G........................A...............G..C.......AG.....C.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  E  K  G  L  D  W  M  G  V  I  Y  P  D  D  L  D  T  T  Y  S  P
                    Query_3684   91   CTGGATCGGCTGGGTGCGCCAGAAGCCCGAGAAAGGCCTGGATTGGATGGGGGTCATCTATCCTGATGACCTTGATACGACATACAGTCC  180
V  90.7% (263/290)  IGHV5-51*01  96   .......................T.....G............G.........A............G....TC......C.G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  N  T  I  Y  L  R  W  S  S  L  K  A  S  D  T  A
                    Query_3684   181  GTCCTTCCAAGGCCAGGTCACAATCTCAGTCGACAAGTCCATCAACACCATCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  90.7% (263/290)  IGHV5-51*01  186  .....................C.......C..............G....GC........A..............................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  V  R  R  L  G  G  D  Y  Y  G  P  F  E  F  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_3684   271  CATGTATTATTGTGTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  359
V  90.7% (263/290)  IGHV5-51*01  276  .........C....C.....---------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                       
D  86.7% (13/15)    IGHD2-21*02  11   -------------------------.....T....G....-------------------------------------------------  25
J  93.0% (40/43)    IGHJ4*02     6    ----------------------------------------------.....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_227195

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           352     3e-99
IGHD6-6*01                                                                                            25.7    0.003
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCACTGGCGC	ATAGCAGCTCGTC	GGGAGGGGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCACTGGCGCATAGCAGCTCGTCGGGAGGGGGGCTTGACCAC	ASLAHSSSSGGGLDH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	235	10	0	95.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3685   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCGGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.9% (235/245)  IGHV3-30*03  47   .........................................A................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  V  K  W  Y  A  D  S  L  K  G  R  I  T  I  S  R  D  N  S  
                    Query_3685   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTGTTAAATGGTATGCAGACTCCCTGAAGGGCCGAATCACCATCTCCAGAGACAATTCCA  180
V  95.9% (235/245)  IGHV3-30*03  137  ................................AA.....AC............G...........T........................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  L  A  H  S  S  S  S  
                    Query_3685   181  AGAACACGCTGTATCTAGAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTCTATTACTGTGCGTCACTGGCGCATAGCAGCTCGTCGG  270
V  95.9% (235/245)  IGHV3-30*03  227  ................GC..................................G............-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (13/13)   IGHD6-6*01   5    ---------------------------------------------------------------------------.............--  17

                                      ---------------->                                  
                                      G  G  G  L  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3685   271  GAGGGGGGCTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.6% (41/42)    IGHJ4*02     7    ---------.....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_227196

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           391     5e-111
IGHD3-10*01                                                                                           46.8    1e-09 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGCTTCAGAC	TACTATGGTTCGGGGAGTTATTAT	N/A	TACAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGCTTCAGACTACTATGGTTCGGGGAGTTATTATTACATTGACTAC	ARVASDYYGSGSYYYIDY	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	250	0	0	100


Alignments

                                       <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                        T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                     Query_3686   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  100.0% (250/250)  IGHV4-61*01  49   ..........................................................................................  138
                                        T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                       -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                     Query_3686   91   CTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  100.0% (250/250)  IGHV4-61*01  139  ..........................................................................................  228
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                       --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  A  S  D  Y  Y  G 
                     Query_3686   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTTGCTTCAGACTACTATGGT  270
V  100.0% (250/250)  IGHV4-61*01  229  ......................................................................--------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (24/24)    IGHD3-10*01  5    ---------------------------------------------------------------------------------.........  13

                                       -IMGT--------------------->                                  
                                        S  G  S  Y  Y  Y  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_3686   271  TCGGGGAGTTATTATTACATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  100.0% (24/24)    IGHD3-10*01  14   ...............----------------------------------------------  28
J  97.8% (45/46)     IGHJ4*02     3    ---------------...T..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_227197

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            321     7e-90
IGHD1-26*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CG	GTGGGACCTACT	TATTCTTAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGTGGGACCTACTTATTCTTATTACTTTGACTAC	ARAVGPTYSYYFDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  A  G  S  I  D  S  S  T  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_3687   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGCTGGCTCCATCGACAGTAGTACCTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.5% (226/247)  IGHV4-4*02   49   ............................G..........AG........A........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  L  G  E  I  D  H  S  G  S  T  T  Y  N  P  S  L  Q  S  R  V  T  I  A  V  D  K  S  N 
                    Query_3687   91   GAGTGGCTTGGCGAAATCGATCATAGTGGGAGCACCACCTACAACCCGTCCCTCCAGAGTCGAGTCACCATAGCGGTGGACAAATCCAAC  180
V  91.5% (226/247)  IGHV4-4*02   139  ......A....G......T..................A................A.................T.A..A.....G.....G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  L  F  S  V  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  V  G  P  T  Y  S  Y 
                    Query_3687   181  AATCTGTTCTCCGTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCCGTTTATTATTGTGCGAGAGCGGTGGGACCTACTTATTCTTAT  270
V  91.5% (226/247)  IGHV4-4*02   229  ..C.A.......C.........G...........................G.....C..........-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  91.7% (11/12)    IGHD1-26*01  7    ---------------------------------------------------------------------......G.....---------  18

                                      ----------->                                  
                                       Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3687   271  TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (46/46)   IGHJ4*02     3    ..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_227191

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           330     1e-92
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCT	CTATGATAGTAATGG	CG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATGATAGTAATGGCGACAACTGGTTCGCCCCC	ARGLYDSNGDNWFAP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  R  Y  R  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3688   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACTTTCAGTAGATATAGGATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-21*01  47   ........................C............C........C.....C....AC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  S  I  S  T  G  S  S  D  I  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3688   91   TGTGGGTCTCTTCCATTAGTACTGGTAGCAGTGACATATTCTACGCAGACTCGGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  92.4% (230/249)  IGHV3-21*01  137  A.........A..........G.A....T...T......A............A....................................A  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  S  L  F  L  Q  M  N  S  L  R  A  D  D  T  A  I  Y  Y  C  A  R  G  L  Y  D  S  N  G  
                    Query_3688   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTATTTATTACTGTGCGAGAGGCCTCTATGATAGTAATGGCG  270
V  92.4% (230/249)  IGHV3-21*01  227  ............A...........................G.........G.G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD3-22*01  7    -------------------------------------------------------------------------...........G...--  21

                                      ---------------->                                  
                                      D  N  W  F  A  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_3688   271  ACAACTGGTTCGCCCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  321
J  96.1% (49/51)    IGHJ5*02     1    ............A..........................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_227193

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           394     7e-112
IGHD1-1*01                                                                                            14.1    9.6   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACGGTTTAGCTGTGGA	TGGAACG	TTCGGGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAACGGTTTAGCTGTGGATGGAACGTTCGGGTTCTAC	ARDNGLAVDGTFGFY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	103	11	0	90.4
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	274	22	0	92.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  D  T  F  S 
                    Query_3689   1    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAGC  90
V  92.6% (274/296)  IGHV1-69*12  1    ...........G...........G...............................A.......................G..........  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  T  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  T  P  I  F  G  T  P  N  Y 
                    Query_3689   91   AGTTATACTATCACCTGGGTGCGACAGGCCCCTGGACAAGGCCTTGAGTGGATGGGAGGGATCACCCCCATCTTTGGTACACCAAACTAC  180
V  92.6% (274/296)  IGHV1-69*12  91   ..C...G......G...........................G......................T...T............G........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  S  A  D  E  S  T  T  T  V  Y  M  V  L  S  S  L  R  S  E  D 
                    Query_3689   181  GCACAGAAGTTCCAGGGCAGAGTCACGATCAGCGCGGACGAATCTACGACCACAGTCTACATGGTTCTGAGCAGCCTGAGATCTGAGGAC  270
V  92.6% (274/296)  IGHV1-69*12  181  .............................T.C............C....G.....C........AG........................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  L  Y  F  C  A  R  D  N  G  L  A  V  D  G  T  F  G  F  Y  W  G  Q  G  T  L  V  T  V 
                    Query_3689   271  ACGGCCCTCTACTTCTGTGCGAGAGATAACGGTTTAGCTGTGGATGGAACGTTCGGGTTCTACTGGGGCCAGGGAACCCTGGTCACCGTC  360
V  92.6% (274/296)  IGHV1-69*12  271  ......G.G..T.A............----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------.......---------------------------------------  15
J  100.0% (38/38)   IGHJ4*02     11   -----------------------------------------------------------...............................  41

                                             
                                       S  S  
                    Query_3689   361  TCCTCAG  367
J  100.0% (38/38)   IGHJ4*02     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_129980

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           353     1e-99
IGHD6-6*01                                                                                            16.1    2.6  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGGAGGCCACGGAA	ATAGCACCTCG	GGTCCGCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGGAGGCCACGGAAATAGCACCTCGGGTCCGCCACTACTACGCCATGGACGTC	ARGEATEIAPRVRHYYAMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	257	31	0	89.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  T  C  K  S  S  G  G  T  F  S  S  D
                    Query_3690   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAGGGTCACCTGCAAGTCTTCTGGCGGCACCTTCAGCAGCGA  90
V  89.2% (257/288)  IGHV1-69*01  6    ..................G...............................A....T........G.......A...............T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  L  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  M  V  E  E  A  D  Y  G  P
                    Query_3690   91   TGCTCTCAACTGGGTGCGACAGGCCCCTGGTCAGGGGCTCGAGTGGATGGGAGGGATCATCCCTATGGTCGAAGAAGCAGACTACGGACC  180
V  89.2% (257/288)  IGHV1-69*01  96   ....A...G.....................A..A.....T..........................CT.T.GTAC....A......C..A  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  R  G  R  V  S  I  T  A  D  E  S  T  S  T  T  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_3690   181  GAAGTTCCGGGGCAGAGTCTCGATTACCGCGGACGAATCGACGAGTACAACCTATATGGAGCTGAGCAGCCTGAGATCGGAAGACACGGC  270
V  89.2% (257/288)  IGHV1-69*01  186  ........A..........A...................C.....C...G....C.......................T..G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        V  Y  Y  W  A  R  G  E  A  T  E  I  A  P  R  V  R  H  Y  Y  A  M  D  V  W  G  Q  G  T  T
                    Query_3690   271  CGTCTATTACTGGGCGAGGGGGGAGGCCACGGAAATAGCACCTCGGGTCCGCCACTACTACGCCATGGACGTCTGGGGCCAAGGGACTAC  360
V  89.2% (257/288)  IGHV1-69*01  276  ...G........T.....------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  90.9% (10/11)    IGHD6-6*01   5    ----------------------------------......G....---------------------------------------------  15
J  90.6% (48/53)    IGHJ6*02     10   -----------------------------------------------------.........GT.......................C..  46

                                                      
                                        V  I  V  S  S 
                    Query_3690   361  AGTCATCGTCTCCTCA  376
J  90.6% (48/53)    IGHJ6*02     47   G....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_96966

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           427     1e-121
IGHD2-2*02                                                                                            10.3    142   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCTAAAACAGGCCCAGAA	ATACC	CGGCCCCCG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCTAAAACAGGCCCAGAAATACCCGGCCCCCGACTTCGGTATGGACGTC	ARPLKQAQKYPAPDFGMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	111	3	0	97.4
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	283	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_3691   2    AGGTTCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  91
V  96.6% (283/293)  IGHV5-51*03  2    ....G.......................G.............................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  R  L  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_3691   92   ATTACTGGATCGCCTGGGTGCGCCGGCTGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  181
V  96.6% (283/293)  IGHV5-51*03  92   GC..........G...........A.A...............................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  H  W  S  S  L  K  A  S  D  
                    Query_3691   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGCACCGCCTACCTGCACTGGAGCAGCCTGAAGGCCTCGGACA  271
V  96.6% (283/293)  IGHV5-51*03  182  .......................................A........................G.........................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  L  Y  Y  C  A  R  P  L  K  Q  A  Q  K  Y  P  A  P  D  F  G  M  D  V  W  G  Q  G  T  
                    Query_3691   272  CCGCCCTGTATTACTGTGCGAGACCTCTAAAACAGGCCCAGAAATACCCGGCCCCCGACTTCGGTATGGACGTCTGGGGCCAAGGGACCG  361
V  96.6% (283/293)  IGHV5-51*03  272  .....A.................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (5/5)     IGHD2-2*02   27   -------------------------------------------.....------------------------------------------  31
J  96.0% (48/50)    IGHJ6*02     13   ---------------------------------------------------------...A............................A  45

                                                       
                                      A  V  T  V  S  S 
                    Query_3691   362  CGGTCACCGTCTCCTCA  378
J  96.0% (48/50)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_129983

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           313     1e-87
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGCTCCCCCCTCAC	TATATCAATGGCTGG	GACT	TTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGCTCCCCCCTCACTATATCAATGGCTGGGACTTTTGGCTTC	ACSPLTISMAGTFGF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	220	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  T  P  G  K  E  L  E 
                    Query_3692   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATAAGTAGTTATTACTGGAACTGGATCCGGCAGACCCCAGGGAAGGAACTGGAG  90
V  91.7% (220/240)  IGHV4-59*08  49   ......................................C........C.......G.............C............G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  T  G  S  A  N  Y  N  P  S  L  K  S  R  V  S  M  S  V  D  S  S  K  N 
                    Query_3692   91   TGGATTGGGTATGTCTATTACACTGGGAGCGCCAACTACAACCCCTCCCTCAAGAGTCGAGTCAGCATGTCGGTGGACTCGTCCAAGAAT  180
V  91.7% (220/240)  IGHV4-59*08  139  ............A.........G.......A.................................C...A..A..A...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  S  L  S  S  V  T  A  V  D  T  A  I  Y  Y  C  A  C  S  P  L  T  I  S  M  A  G 
                    Query_3692   181  CAGTTCTCCCTGAGTCTGAGTTCTGTGACCGCCGTAGACACGGCCATCTATTACTGTGCGTGCTCCCCCCTCACTATATCAATGGCTGGG  270
V  91.7% (220/240)  IGHV4-59*08  229  .............AG.....C.............C..........G.G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  86.7% (13/15)    IGHD6-19*01  4    --------------------------------------------------------------------------....G..G.......-  18

                                      ----------->                                  
                                       T  F  G  F  W  G  Q  G  S  L  V  R  V  S  S  
                    Query_3692   271  ACTTTTGGCTTCTGGGGCCAGGGATCCCTGGTCCGCGTCTCCTCAG  316
J  88.4% (38/43)    IGHJ4*02     6    ---....A..A.............A........AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_129984

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           346     2e-97
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGTCGTCGAGGGCACACGACATT	TATAGCAGTGGCTGG	GGGAGGCCGGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGTCGTCGAGGGCACACGACATTTATAGCAGTGGCTGGGGGAGGCCGGCTGACTAC	ARASSRAHDIYSSGWGRPADY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  D  S  G  F  T  F  S  S  H  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3693   1    GGTCCCTGAGACTCTCCTGTGCAGACTCTGGATTCACCTTCAGTAGCCACGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-30*03  47   ........................C......................T.T........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  S  Y  E  G  S  T  K  Y  Y  V  D  S  V  K  G  R  F  T  A  S  R  D  N  S  
                    Query_3693   91   AGTGGGTGGCTTTTATATCATATGAAGGAAGTACTAAATACTATGTAGACTCCGTGAAGGGCCGGTTCACCGCCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-30*03  137  ..........AG.............T.......A...........C..................A......AT.................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  A  S  S  R  A  H  D  
                    Query_3693   181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGAGCTGATGACACGGCTGTCTATTACTGTGCGAGAGCGTCGTCGAGGGCACACGACA  270
V  94.4% (235/249)  IGHV3-30*03  227  .......G................................G...........G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      DR3-IMGT-------------------------->                                  
                                      I  Y  S  S  G  W  G  R  P  A  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_3693   271  TTTATAGCAGTGGCTGGGGGAGGCCGGCTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  339
D  100.0% (15/15)   IGHD6-19*01  4    --...............----------------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    ----------------------------..............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_129985

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATTTGCTGA	TTCGGGGA	TTGAAAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGTC	AKFADSGIETYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	276	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  S  F
                    Query_3694   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTATCAGCTT  90
V  96.2% (276/287)  IGHV5-51*01  6    ...................................................................................C.....A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  C  L  G  I  I  D  P  R  D  S  D  T  T  Y  S  P
                    Query_3694   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGCTTGGGGATCATCGATCCTCGTGACTCTGATACCACATACAGCCC  180
V  96.2% (276/287)  IGHV5-51*01  96   ........G....................................GA...........T.....G...............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  V  S  V  D  K  S  T  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3694   181  GTCCTTCCAAGGCCAGGTCACCGTCTCAGTCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (276/287)  IGHV5-51*01  186  ......................A......C...........T................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  K  F  A  D  S  G  I  E  T  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_3694   271  CATGTATTACTGTGCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTC  360
V  96.2% (276/287)  IGHV5-51*01  276  .................-------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                           
D  100.0% (8/8)     IGHD3-10*01  13   ---------------------------........-------------------------------------------------------  20
J  98.0% (48/49)    IGHJ6*02     14   ------------------------------------------.............................................C..  61

                                       
                                       
                    Query_3694   361  A  361
J  98.0% (48/49)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_129986

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           396     2e-112
IGHD6-6*01                                                                                            21.8    0.046 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCC	ATAGCAGCTCG	GATGGGGA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCATAGCAGCTCGGATGGGGAACTTTGACTCC	AAIAARMGNFDS	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	19	5	0	79.2
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	293	3	3	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  V  S 
                    Query_3695   3    CAGGTTCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCCGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCGTCAGT  92
V  93.5% (272/291)  IGHV1-69*01  1    .....G...................................T..........................................T....C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  L  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  L  L  R  T  A  N  Y 
                    Query_3695   93   AGGTATCTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGATCATCCCTCTTTTAAGGACAGCAAACTAC  182
V  93.5% (272/291)  IGHV1-69*01  91   ..C...GC.................................G...........................A.C..TG.T............  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  H  E  S  T  S  T  V  Y  M  E  V  N  S  L  G  S  Q  D 
                    Query_3695   183  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGCACGAATCCACGAGCACAGTCTACATGGAGGTGAACAGCCTGGGATCTCAGGAC  272
V  93.5% (272/291)  IGHV1-69*01  181  ....................................G..................C..........C...G.......A.....G.....  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                
                                       T  A  V  Y  Y  C  A  A  I  A  A  R  M  G  N  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3695   273  ACGGCCGTGTATTACTGTGCGGCCATAGCAGCTCGGATGGGGAACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  358
V  93.5% (272/291)  IGHV1-69*01  271  .....................-----------------------------------------------------------------  291
                                       T  A  V  Y  Y  C  A                                                                  
D  100.0% (11/11)   IGHD6-6*01   5    ------------------------...........---------------------------------------------------  15
J  97.7% (42/43)    IGHJ4*02     4    -------------------------------------------.........A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_129987

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-9*01                                                                                            23.8    0.010
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCGG	TTACGATTTTTTGTCTGG	G	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGCGGTTACGATTTTTTGTCTGGG	ARDRGYDFLSG	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  F  R  D  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3696   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATATTCAGAGATGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   ......................................CAG...T.G...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_3696   91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGAGAACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATTTCAATTGACACCTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ................A..................C......................................A...G.A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  D  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  G  Y  D  F  L 
                    Query_3696   181  AAGGACCAGTTCTCCCTGAACCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGCGCGAGAGATCGCGGTTACGATTTTTTG  270
V  94.4% (237/251)  IGHV4-31*03  229  ...A................G.........................................T........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (16/18)    IGHD3-9*01   4    -----------------------------------------------------------------------------.......A.....  16

                                      ----->                                
                                       S  G  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3696   271  TCTGGGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  308
D  88.9% (16/18)    IGHD3-9*01   17   A....---------------------------------  21
J  100.0% (32/32)   IGHJ4*02     15   ------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_129989

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*14                                                                                           425     3e-121
IGHD1-26*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*14	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCG	AGTGGGAGCTACT	TGGGGCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTAC	ARDLEWELLGAFDY	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	284	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_3697   3    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  92
V  95.9% (284/296)  IGHV1-69*14  1    ...........G...........G..................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  S  F  G  T  A  H  Y 
                    Query_3697   93   AGATATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTAGCTTTGGAACAGCACACTAC  182
V  95.9% (284/296)  IGHV1-69*14  91   ..C...................................................................T......T......A.....  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  R  F  Q  G  R  V  T  I  T  A  D  R  S  T  S  T  A  Y  M  E  L  S  S  L  S  S  E  D 
                    Query_3697   183  GCACAGAGATTCCAGGGCAGAGTCACGATTACCGCGGACAGATCCACGAGCACGGCCTACATGGAGCTGAGCAGCCTGAGCTCTGAGGAC  272
V  95.9% (284/296)  IGHV1-69*14  181  .......AG...............................A............A..........................A.........  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  D  L  E  W  E  L  L  G  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_3697   273  ACGGCCGTGTACTACTGTGCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  362
V  95.9% (284/296)  IGHV1-69*14  271  ...........T..............----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (13/13)   IGHD1-26*01  6    -------------------------------.............----------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------------------------.......................................  44

                                          
                                       S  
                    Query_3697   363  TCAG  366
J  100.0% (43/43)   IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_96964

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           302     3e-84
IGHD4-4*01                                                                                            12.2    31   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TACCCCTGGGCATG	GTAACT	CCTGGGG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATACCCCTGGGCATGGTAACTCCTGGGGTGACTTC	ARDTPGHGNSWGDF	239	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	11	1	0	91.7
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	47	4	0	92.2
CDR2-IMGT	101	124	24	19	5	0	79.2
FR3-IMGT	125	238	114	106	8	0	93
CDR3-IMGT (germline)	239	246	8	7	1	0	87.5
Total	N/A	N/A	233	213	20	0	91.4


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  V  S  G  F  T  F  S  N  Y  E  M  N  W  V  R  Q  V  P  G  K  G  L  E  W  L  S  Y  I 
                    Query_3698   14   TGTGCAGTCTCTGGATTCACCTTCAGTAATTATGAAATGAACTGGGTCCGCCAGGTTCCAGGGAAGGGCCTGGAGTGGCTCTCATACATT  103
V  91.4% (213/233)  IGHV3-48*03  64   .......C....................G..........................C............G.........G.T.........  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  T  D  G  S  T  T  I  Y  A  D  S  V  R  G  R  F  T  M  S  R  D  N  A  K  N  S  L  F  L 
                    Query_3698   104  AGTACTGATGGTAGTACTACAATTTATGCAGACTCTGTGAGGGGCCGATTCACCATGTCCAGAGACAACGCCAAGAACTCACTGTTTCTG  193
V  91.4% (213/233)  IGHV3-48*03  154  ....G.AG.........C.T.TAC..C.............A...............C............................A....  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------------CDR3-IMGT--------------->   
                                       Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  T  P  G  H  G  N  S  W  G  D  F  W 
                    Query_3698   194  CAAATGGACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGGGATACCCCTGGGCATGGTAACTCCTGGGGTGACTTCTGG  283
V  91.4% (213/233)  IGHV3-48*03  244  ......A...........................................A..-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (6/6)     IGHD4-4*01   9    -------------------------------------------------------------------......-----------------  14
J  97.4% (38/39)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                   
                                       G  Q  G  T  L  V  T  V  S  S
                    Query_3698   284  GGCCAGGGAACCCTGGTCACCGTCTCCTC  312
J  97.4% (38/39)    IGHJ4*02     18   .............................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_30988

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           350     8e-99
IGHD3-16*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGAAGTGGGGG	GGGGGAG	CGGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGAAGTGGGGGGGGGGAGCGGAATGACTAC	ARDGSGGGERNDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3699   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-33*01  47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  W  Y  D  G  S  N  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3699   91   AGTGGGTGGCAGCTATATGGTATGATGGAAGTAATAAAAACTATGTAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (237/250)  IGHV3-33*01  137  ............T.........................T......C......C.....................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  K  I  L  Y  L  Q  M  N  S  L  T  D  E  D  T  A  V  Y  Y  C  A  R  D  G  S  G  G  G  E  
                    Query_3699   181  AGAAAATTTTGTATCTGCAAATGAATAGCCTGACAGACGAGGACACGGCTGTGTATTATTGTGCGAGAGATGGAAGTGGGGGGGGGGAGC  270
V  94.8% (237/250)  IGHV3-33*01  227  ....C.CGC................C.......G..C.....................C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-16*01  18   ----------------------------------------------------------------------------------.......-  24

                                      ---------->                                  
                                      R  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3699   271  GGAATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (41/41)   IGHJ4*02     8    ----.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_96965

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           352     3e-99
IGHD2-2*01                                                                                            39.1    3e-07
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACG	TTGTAGTAGTACCAGCTGCT	TTTACGAG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACGTTGTAGTAGTACCAGCTGCTTTTACGAGATGGACGTC	ARVRCSSTSCFYEMDV	261	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	47	4	0	92.2
CDR2-IMGT	126	146	21	18	3	0	85.7
FR3-IMGT	147	260	114	106	8	0	93
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	246	21	0	92.1


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  D  V  Y  G  G  S  F  S  L  Y  F  W  T  W  V  R  
                    Query_3700   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCGATGTCTATGGTGGGTCCTTCAGTCTTTACTTCTGGACGTGGGTCCGCC  90
V  92.1% (246/267)  IGHV4-34*01  26   ........T.......T.........................C......................GG.....A.....GC...A......  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  S  N  H  S  G  T  S  T  Y  N  S  S  L  E  S  R  V  T  
                    Query_3700   91   AGCCCCCAGGGAAGGGGCTGGAGTGGATCGGGGAAAGCAATCATAGTGGAACCTCCACCTACAACTCGTCCCTCGAGAGTCGAGTCACCA  180
V  92.1% (246/267)  IGHV4-34*01  116  ............................T.......T..............G.A...A.......C........A...............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  
                    Query_3700   181  TTTCAGTGGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGACTTCTGTGACCGCCGCGGACACGGCTGTATATTACTGTGCGAGAGTAC  270
V  92.1% (246/267)  IGHV4-34*01  206  .A.....A..................................GC..........................G................---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      ----------CDR3-IMGT------------------>                                 
                                      R  C  S  S  T  S  C  F  Y  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3700   271  GTTGTAGTAGTACCAGCTGCTTTTACGAGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  100.0% (20/20)   IGHD2-2*01   7    -....................--------------------------------------------------  26
J  100.0% (42/42)   IGHJ6*02     21   -----------------------------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_30989

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD6-13*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	ARHRYLGPRQQATENDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  Q  G  S  G  Y  T  F  S  T  Y
                    Query_3701   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTTCCACCTA  90
V  95.9% (279/291)  IGHV5-51*01  6    ..........................................G..................A...............G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  V  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_3701   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGTTGGGAGTCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G.....................................A....GA.......................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3701   181  GTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  ......................A...........................................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_3701   271  CATGTATTACTGTGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  95.9% (279/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-13*01  8    ---------------------------------------.......--------------------------------------------  14
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_3701   361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_96962

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            347     7e-98
IGHD1-1*01                                                                                            14.1    8.1  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACTAAAACAAGAC	CTGGGACGAC	G	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACTAAAACAAGACCTGGGACGACG	ARDTKTRPGTT	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                     <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                        S  L  R  L  S  C  A  V  S  G  G  S  I  S  S  I  Y  Y  W  T  W  V  R  Q  P  P  G  K  G  
                    Query_3702  1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTATTTACTACTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  94.4% (236/250)  IGHV4-4*02  47   ..A.....TCC...A.................................G.A...GG....G.............................  136
                                        T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                     ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                     L  E  W  I  G  E  I  Y  H  S  G  T  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  
                    Query_3702  91   TGGAGTGGATTGGGGAAATCTATCATAGTGGGACCGCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCA  180
V  94.4% (236/250)  IGHV4-4*02  137  .................................G.A......................................................  226
                                     L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                     -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                     K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  K  T  R  P  G  
                    Query_3702  181  AGAACCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATACTAAAACAAGACCTGGGA  270
V  94.4% (236/250)  IGHV4-4*02  227  ...................G....G.............................................--------------------  296
                                     K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD1-1*01  8    ------------------------------------------------------------------------------------....A.  13

                                     ---->                                  
                                     T  T  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3702  271  CGACGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
D  90.0% (9/10)     IGHD1-1*01  14   ....-----------------------------------  17
J  100.0% (34/34)   IGHJ4*02    15   -----..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_341955

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           399     3e-113
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ3*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGATGGA	ATTACTAT	CAAACGAAGCA	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCGATGGAATTACTATCAAACGAAGCAATGGTTTTGATATA	TRGDGITIKRSNGFDI	281	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	166	21	19	2	0	90.5
FR3-IMGT	167	280	114	109	5	0	95.6
CDR3-IMGT (germline)	281	287	7	6	1	0	85.7
Total	N/A	N/A	287	271	16	0	94.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  D  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S
                    Query_3703   1    GCAGCTGGTGCAGTCTGGAGGAGACTTGATCCAGCCGGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAG  90
V  94.4% (271/287)  IGHV3-53*01  6    ..........G............G............T....................................................A  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  A  W  V  R  Q  A  P  G  R  G  L  E  W  V  S  V  I  Y  S  G  G  T  T  Y  F  A  D  S
                    Query_3703   91   CTACATGGCTTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGGAGTGGGTCTCAGTTATTTACAGCGGTGGTACCACATACTTCGCAGACTC  180
V  94.4% (271/287)  IGHV3-53*01  96   .......AGC......................A...........................T..........G........A.........  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  L
                    Query_3703   181  CGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGCACAGCCTGAGAGCCGACGACACGGCCCT  270
V  94.4% (271/287)  IGHV3-53*01  186  .............................................................A................G.........G.  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><-------------------CDR3-IMGT------------------>                                
                                        Y  Y  C  T  R  G  D  G  I  T  I  K  R  S  N  G  F  D  I  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3703   271  GTACTACTGTACGAGAGGCGATGGAATTACTATCAAACGAAGCAATGGTTTTGATATATGGGGCCAAGGGACACTGGTCACCGTCTCTTC  360
V  94.4% (271/287)  IGHV3-53*01  276  ...T......G......-------------------------------------------------------------------------  292
                                        Y  Y  C  A  R                                                                           
D  100.0% (8/8)     IGHD3-10*01  3    -------------------------........---------------------------------------------------------  10
J  93.8% (45/48)    IGHJ3*02     3    --------------------------------------------...C.........C...............A................  48

                                        
                                        
                    Query_3703   361  AG  362
J  93.8% (45/48)    IGHJ3*02     49   ..  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_96963

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD6-13*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	ARHRYLGPRQQATENDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  Q  G  S  G  Y  T  F  T  T  Y
                    Query_3704   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTACCACCTA  90
V  96.2% (280/291)  IGHV5-51*01  6    ..........................................G..................A...............G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  P  R  Y  S  P
                    Query_3704   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAGTCATCTATCCTGGTGACTCTGATCCCAGATACAGCCC  180
V  96.2% (280/291)  IGHV5-51*01  96   ........G..........................................GA.......................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3704   181  GTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (280/291)  IGHV5-51*01  186  ......................A................................C..........C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_3704   271  CATGTATTACTGTGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  96.2% (280/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-13*01  8    ---------------------------------------.......--------------------------------------------  14
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_3704   361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_161768

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           325     3e-91
IGHD2-15*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGAGTTC	TTGCAGTGGTGGCACGTGCTAC	CTGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGAGTTCTTGCAGTGGTGGCACGTGCTACCTGTTCTACTACTACGCTGTGGACGTC	AGSSCSGGTCYLFYYYAVDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  N  S  H  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_3705   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTAGTAATAGTCACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  92.3% (227/246)  IGHV4-39*01  49   ...............................G.........C....G....T.....................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  I  I  Y  H  S  G  S  A  F  Y  N  P  S  L  E  N  R  V  T  M  S  V  D  T  S 
                    Query_3705   91   CTGGAGTGGATGGGGATAATCTATCATAGTGGGAGCGCCTTCTACAACCCGTCCCTCGAGAATCGAGTCACCATGTCCGTTGACACGTCC  180
V  92.3% (227/246)  IGHV4-39*01  139  ...........T....GT......T...........A...A................A...G............A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  V  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  H  C  A  G  S  S  C  S  G  G  T 
                    Query_3705   181  AAGAACCAGGTCTCCCTGAGGTTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATCACTGTGCGGGGAGTTCTTGCAGTGGTGGCACG  270
V  92.3% (227/246)  IGHV4-39*01  229  .........T.........A.C...................................T........------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  81.8% (18/22)    IGHD2-15*01  7    --------------------------------------------------------------------------...T........T.GC  22

                                      DR3-IMGT------------------------>                                 
                                       C  Y  L  F  Y  Y  Y  A  V  D  V  W  G  Q  G  A  T  I  T  V  S  S 
                    Query_3705   271  TGCTACCTGTTCTACTACTACGCTGTGGACGTCTGGGGCCAGGGGGCCACGATCACCGTCTCCTCA  336
D  81.8% (18/22)    IGHD2-15*01  23   ......------------------------------------------------------------  28
J  90.9% (50/55)    IGHJ6*02     8    -----------...........G.A................A...A.....G..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_75863

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           396     2e-112
IGHD1-26*01                                                                                           14.1    9.3   
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	TGGGAGC	CATGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGGAGCCATGCACTACTCCGGTATGGACGTC	ARLGAMHYSGMDV	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	271	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  S  F  R  T  Y
                    Query_3706   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCTCCTTCAGGACCTA  90
V  93.8% (271/289)  IGHV1-69*06  6    ..................G.........................................................A.......C.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        T  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  N  I  I  T  I  F  G  T  A  D  Y  A  Q
                    Query_3706   91   TACTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGCTGGGAAACATCATCACTATCTTTGGTACAGCAGACTACGCACA  180
V  93.8% (271/289)  IGHV1-69*06  96   .G............................................A.....GGG......C.................A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  K  F  E  D  P  A
                    Query_3706   181  GAACTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGTACAGCCTATATGGAGCTGAGCAGCCTGAAATTTGAGGACCCGGC  270
V  93.8% (271/289)  IGHV1-69*06  186  ...G.........................................C........C...................G..C.......A....  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                 
                                        V  Y  Y  C  A  R  L  G  A  M  H  Y  S  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3706   271  CGTTTATTACTGTGCGAGACTGGGAGCCATGCACTACTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  355
V  93.8% (271/289)  IGHV1-69*06  276  ...G...............------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD1-26*01  8    --------------------.......----------------------------------------------------------  14
J  98.1% (52/53)    IGHJ6*02     10   --------------------------------......A..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_322897

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           341     6e-96
IGHD3-3*02                                                                                            21.8    0.042
IGHJ6*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-3*02	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	CATTTTTGAGGTGGTTA	AAGGAGTGCAA	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACATTTTTGAGGTGGTTAAAGGAGTGCAATACGACTATTACGGTATGGACGTC	AKDIFEVVKGVQYDYYGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  I  S  I  Y  G  I  H  W  V  R  Q  A  P  G  K  E  L  
                    Query_3707   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTAGTATCAGTATTTATGGCATACACTGGGTCCGCCAGGCTCCAGGCAAGGAGCTGG  90
V  93.6% (234/250)  IGHV3-30*18  47   ..................................C.CCT......GC........G............................G.....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  *  V  A  V  I  A  Y  D  G  T  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3707   91   AGTGAGTGGCAGTTATAGCATACGATGGAACTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-30*18  137  ....G............T....T.......G...........................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  E  M  T  S  L  R  T  E  D  T  A  V  Y  Y  C  A  K  D  I  F  E  V  V  K  
                    Query_3707   181  AGAACACGCTGTATCTGGAAATGACCAGCCTGAGAACTGAGGACACGGCTGTCTATTACTGTGCGAAAGACATTTTTGAGGTGGTTAAAG  270
V  93.6% (234/250)  IGHV3-30*18  227  .................C......A..........G................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.2% (15/17)    IGHD3-3*02   8    ----------------------------------------------------------------------........GA.......---  24

                                      R3-IMGT------------------------>                                 
                                      G  V  Q  Y  D  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3707   271  GAGTGCAATACGACTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
J  96.5% (55/57)    IGHJ6*02     6    --------...T....C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_158534

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           325     3e-91
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGGGAA	AACGAC	TGGGATCGTAGGTGGTCCGGT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGGGAAAACGACTGGGATCGTAGGTGGTCCGGTTTTCACTTC	ASRENDWDRRWSGFHF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3708   1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.0% (225/242)  IGHV4-59*08  49   ....................T......................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       L  I  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S  R  N 
                    Query_3708   91   TTGATTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGTCGACTCACCATCTCAGTAGACACGTCGAGGAAC  180
V  93.0% (225/242)  IGHV4-59*08  139  .G......G...A........A........A.....................A.......G.......A..............C.A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  S  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  N  D  W  D  R  R  W 
                    Query_3708   181  CAGTTCTCCCTGAGCGTGAACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCGAGCCGGGAAAACGACTGGGATCGTAGGTGG  270
V  93.0% (225/242)  IGHV4-59*08  229  .............AGC...G.........C................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD1-1*01   12   ---------------------------------------------------------------------......---------------  17

                                      -------------->                                  
                                       S  G  F  H  F  W  G  P  G  T  L  V  T  V  S  S  
                    Query_3708   271  TCCGGTTTTCACTTCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  319
J  93.0% (40/43)    IGHJ4*02     6    ------...G...A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_75864

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           424     9e-121
IGHD3-3*01                                                                                            33.4    2e-05 
IGHJ5*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	TTCCCCGACGAGGCGG	TTTTTGGAGTGGTTATT	CCCCCAC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGTTCCCCGACGAGGCGGTTTTTGGAGTGGTTATTCCCCCACCTGGTTCGGCCCC	AGVPRRGGFWSGYSPTWFGP	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	289	280	9	0	96.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  T  F  T  S  Y 
                    Query_3709   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACTTCTGGTTACACCTTTACCAGTTAT  91
V  96.9% (280/289)  IGHV1-18*01  7    ...............................................................G......................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_3709   92   GGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGTTGGGATGGATCAGCGGTTACAATGGTAATACAAACTATGCACAG  181
V  96.9% (280/289)  IGHV1-18*01  97   .......G.....................................A...............C............C...............  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  V  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3709   182  AGGGTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.9% (280/289)  IGHV1-18*01  187  .A.C......................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------CDR3-IMGT------------------------>                  
                                       V  Y  Y  C  A  G  V  P  R  R  G  G  F  W  S  G  Y  S  P  T  W  F  G  P  L  G  Q  G  T  L 
                    Query_3709   272  GTGTATTACTGTGCGGGAGTTCCCCGACGAGGCGGTTTTTGGAGTGGTTATTCCCCCACCTGGTTCGGCCCCTTGGGCCAGGGAACCCTG  361
V  96.9% (280/289)  IGHV1-18*01  277  ...............A...-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (17/17)   IGHD3-3*01   10   -----------------------------------.................--------------------------------------  26
J  93.6% (44/47)    IGHJ5*02     5    -----------------------------------------------------------........A.....G................  35

                                                      
                                       V  T  V  S  S  
                    Query_3709   362  GTCACCGTCTCTTCAG  377
J  93.6% (44/47)    IGHJ5*02     36   ...........C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_7389

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           10.3    117  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAGGTTTCGATA	GGGGG	G	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAGGTTTCGATAGGGGGGGGTTCGACCCC	ARDRGFDRGGFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3710   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A......A..............................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  Y  Y  S  G  S  I  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  M  P  K  N 
                    Query_3710   91   TGGATTGCGTATATCTATTACAGTGGGAGCATCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACATGCCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  .......G.......................C...C.....................................T.....C.T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  I  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  G  F  D  R  G  G  F 
                    Query_3710   181  CAGATCTCCCTGAAGTTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATAGAGGTTTCGATAGGGGGGGGTTC  270
V  95.1% (233/245)  IGHV4-59*01  229  ...T...........C................T................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -------------------------------------------------------------------------------.....------  22
J  100.0% (45/45)   IGHJ5*02     7    -------------------------------------------------------------------------------------.....  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3710   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (45/45)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_334468

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           325     2e-91
IGHD3-10*01                                                                                           10.3    116  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGA	CTTCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGACTTCAGGCCTTTGACTCC	ARGGLQAFDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  G  G  F  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_3711   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAACAGTGGTGGATTCTACTGGACTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  91.6% (229/250)  IGHV4-31*03  49   ........................................G.........T.A........GC...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  Y  T  G  H  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  L  D  T  S 
                    Query_3711   91   CTAGAGTGGATTGGTTACATCTTTTACACTGGACACACCTACTACAATCCGTCCCTCAGGAGTCGACTTACCATATCACTAGACACATCT  180
V  91.6% (229/250)  IGHV4-31*03  139  ..G...........G.......A.....G...GAG............C..........A.......G...........G.......G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       E  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  L  Q  A  F  D 
                    Query_3711   181  GAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGGGGACTTCAGGCCTTTGAC  270
V  91.6% (229/250)  IGHV4-31*03  229  A...................G.....C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------.....---------------  20
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3711   271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.7% (43/44)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_7388

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3712   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3712   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_3712   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3712   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_240545

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           307     1e-85
IGHD7-27*01                                                                                           14.1    7.9  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGG	GGGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGGGGCGTTGGTTCGACGCC	ARGLGGRWFDA	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	220	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3713   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  90.2% (220/244)  IGHV4-59*01  49   ......................................C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_3713   91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  90.2% (220/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  G  T  A  I  Y  F  C  A  R  G  L  G  G  R  W  F  D  A 
                    Query_3713   181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGGCACGGCCATTTATTTCTGTGCGAGAGGACTGGGGGGGCGTTGGTTCGACGCC  270
V  90.2% (220/244)  IGHV4-59*01  229  ...........G...C....C...........T....A.......G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD7-27*01  4    -----------------------------------------------------------------.......------------------  10
J  93.5% (43/46)    IGHJ5*02     6    ------------------------------------------------------------------------------.........C..  17

                                                                        
                                       W  G  Q  G  A  L  V  S  V  S  S  
                    Query_3713   271  TGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  304
J  93.5% (43/46)    IGHJ5*02     18   ............A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_341950

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           350     8e-99
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ6*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTTAT	TTACGATTTTTGGA	AGAAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTTATTTACGATTTTTGGAAGAAGTACTACTACGCTATGGACGTC	ARVIYDFWKKYYYAMDV	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  T  A  Y  Y  W  G  W  V  R  Q  P  P  G  K  G 
                    Query_3714   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGCACTGCTTATTACTGGGGCTGGGTCCGCCAGCCCCCCGGGAAGGGG  90
V  95.2% (236/248)  IGHV4-39*01  49   ............................................T.G.AG...C............A.............A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  M  Y  Y  T  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3714   91   CTGGAGTGGATTGGGACTATGTATTATACTGGGAGTACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  95.2% (236/248)  IGHV4-39*01  139  ................G...C.......G......C......................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  I  Y  D  F  W  K 
                    Query_3714   181  AAGAACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGGGTTATTTACGATTTTTGGAAG  270
V  95.2% (236/248)  IGHV4-39*01  229  .........................G..........................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (14/14)   IGHD3-3*01   4    --------------------------------------------------------------------------..............--  17

                                      MGT-------------------->                                 
                                       K  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3714   271  AAGTACTACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  327
J  98.1% (53/54)    IGHJ6*02     9    ---..........G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_84810

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           341     5e-96
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	230	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3715   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.0% (230/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3715   91   TGGATTGGGTATGTCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.0% (230/242)  IGHV4-59*01  139  ............A...AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_3715   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  95.0% (230/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3715   271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_42899

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           336     1e-94
IGHD3-10*01                                                                                           10.3    118  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_3716   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-21*01  47   ............................................AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  E  Y  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_3716   91   AGTGGGTCTCATCCATTAGTAGTACTAGTGAATACATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  93.5% (231/247)  IGHV3-21*01  137  ........................G....AGT........C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_3716   181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGGGTCCGATCGGGCTATGATGCTT  270
V  93.5% (231/247)  IGHV3-21*01  227  ............A......A..............................G................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3716   271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_163384

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           335     4e-94
IGHD2-15*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	ACCCGTTTTGTCT	TGGCGGTAGATGC	ATCTCGGGCTTGAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACCCGTTTTGTCTTGGCGGTAGATGCATCTCGGGCTTGAGTGACTTC	ARDPFCLGGRCISGLSDF	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  P  F  S  G  H  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_3717   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGCCCTTCAGTGGTCACTACTGGAACTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  93.9% (229/244)  IGHV4-34*01  49   .........................A.......T...........T.........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  R  G  G  S  T  T  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_3717   91   TGGATTGGGGAAATCAATCGTGGTGGAAGCACCACCTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCCAAGAAC  180
V  93.9% (229/244)  IGHV4-34*01  139  ...................A.A............A.................................A..A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  F  C  L  G  G  R  C 
                    Query_3717   181  CAATTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGCGAGACCCGTTTTGTCTTGGCGGTAGATGC  270
V  93.9% (229/244)  IGHV4-34*01  229  ..G...........G....G...........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (11/13)    IGHD2-15*01  13   -----------------------------------------------------------------------------...T.....C...  25

                                      -------------------->                                  
                                       I  S  G  L  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3717   271  ATCTCGGGCTTGAGTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.6% (40/41)    IGHJ4*02     8    --------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_163385

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            346     2e-97
IGHD3-3*01                                                                                            21.8    0.042
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	CCC	TTGGAGGGGTTCTTATA	GCGGTATAATAACCAGGGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGCCCTTGGAGGGGTTCTTATAGCGGTATAATAACCAGGGGTGCTTTTCATATT	VSPWRGSYSGIITRGAFHI	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	245	5	4	1	0	80
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  G  V  S  G  G  S  I  S  N  S  Y  W  W  S  W  V  R  Q  P  P  G  K  G  P 
                    Query_3718  1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGTGGCTCCATCAGCAATAGTTATTGGTGGAGTTGGGTCCGCCAGCCTCCAGGGAAGGGGCCG  90
V  95.1% (233/245)  IGHV4-4*02  49   ...................C.......................G....A.C.......................C.............T.  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  V  Y  H  S  G  S  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_3718  91   GAGTGGATTGGGGAAGTCTATCATAGTGGGAGCACCAATTACAACCGGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  95.1% (233/245)  IGHV4-4*02  139  ...............A......................C.......C...........................................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                      N  H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  V  S  P  W  R  G  S  Y  S  G 
                    Query_3718  181  AACCACTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGTGAGCCCTTGGAGGGGTTCTTATAGCGGT  270
V  95.1% (233/245)  IGHV4-4*02  229  .....G................G......................................C...-------------------------  293
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  88.2% (15/17)    IGHD3-3*01  13   --------------------------------------------------------------------......T....A.....-----  29

                                     MGT----------------------->                                  
                                      I  I  T  R  G  A  F  H  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3718  271  ATAATAACCAGGGGTGCTTTTCATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  331
J  95.7% (45/47)    IGHJ3*02    4    --------------.......G....C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_163381

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           315     5e-88
IGHD3-16*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	GGTGGAAATTA	TTTGGGG	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGTGGAAATTATTTGGGGGGTATGGACGTC	AGGNYLGGMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  Y  Y  T  M  Y  W  V  R  Q  V  P  G  R  G  L  
                    Query_3719   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATTATTATACCATGTACTGGGTCCGTCAAGTTCCGGGGAGGGGTCTGG  90
V  91.0% (223/245)  IGHV3-43*01  47   ............................................G...........C...............C........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  I  S  W  D  G  E  T  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  G  
                    Query_3719   91   AGTGGGTCTCTCTTATTAGTTGGGATGGTGAGACTACAGACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACACCGGCA  180
V  91.0% (223/245)  IGHV3-43*01  137  ..............................GT.GC...T........................................A....A.A...  226
                                      E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  R  S  L  F  L  Q  M  N  S  L  I  S  E  D  T  A  L  Y  Y  C  A  G  G  N  Y  L  G  G  M  
                    Query_3719   181  AAAGGTCCCTCTTTCTGCAGATGAACAGCCTGATAAGTGAAGACACCGCCTTATATTACTGTGCAGGTGGAAATTATTTGGGGGGTATGG  270
V  91.0% (223/245)  IGHV3-43*01  227  ...AC.....G.A......A........T....G..C...G...........G............-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  15   ----------------------------------------------------------------------------.......-------  21
J  95.6% (43/45)    IGHJ6*02     18   -----------------------------------------------------------------------------------.......  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_3719   271  ACGTCTGGGGCCAAGGGACAACGGTCTCCGTCTCCTCA  308
J  95.6% (43/45)    IGHJ6*02     25   ...................C......A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_163389

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           349     2e-98
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGCGGGGGGGG	ATTACTATGAGAATAGTGGTTATT	GGCTG	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGCGGGGGGGGATTACTATGAGAATAGTGGTTATTGGCTGGACTTC	ARAAGGDYYENSGYWLDF	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3720   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTCAGTAGCTACACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-21*01  47   ....................................CC...........T.G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  R  V  S  K  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  T  S  R  D  N  A  
                    Query_3720   91   AGTGGGTCTCATCCATTAGTCGTGTTAGTAAGTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCACGTCCAGAGACAACGCCA  180
V  94.8% (236/249)  IGHV3-21*01  137  ....................A..AG.....GT........................................TC................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  A  A  G  G  D  Y  Y  
                    Query_3720   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGAGAGCGGCGGGGGGGGATTACTATG  270
V  94.8% (236/249)  IGHV3-21*01  227  ..................................................G.G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (22/24)    IGHD3-22*01  3    ---------------------------------------------------------------------------------.........  11

                                      IMGT--------------------->                                  
                                      E  N  S  G  Y  W  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3720   271  AGAATAGTGGTTATTGGCTGGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  91.7% (22/24)    IGHD3-22*01  12   .T.G...........---------------------------------------------  26
J  97.5% (39/40)    IGHJ4*02     9    --------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_264177

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           346     2e-97
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCG	ACGGTGAC	ACCGAGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACGGTGACACCGAGAATGACTAC	AADGDTENDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  S  F  G  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_3721   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGACTCACCTTCAGTAGCTTTGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGG  90
V  95.1% (233/245)  IGHV3-33*01  47   ................................T...............A......................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  K  K  Y  Y  T  D  S  V  K  G  R  F  I  I  S  R  D  N  S  
                    Query_3721   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAAGAAATACTATACAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCA  180
V  95.1% (233/245)  IGHV3-33*01  137  ..................................T.........G........................C....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  F  C  A  A  D  G  D  T  E  N  D  
                    Query_3721   181  AGAACACGTTGTATCTGCAGATGAACAGCCTGAGAGTCGACGACACGGCTGTCTATTTCTGTGCGGCCGACGGTGACACCGAGAATGACT  270
V  95.1% (233/245)  IGHV3-33*01  227  ........C..........A................C...G...........G....A.......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD4-17*01  6    ---------------------------------------------------------------------........-------------  13
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3721   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_264176

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	ATGCGT	TATATCAGTGGC	CGTGTCGATCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAATGCGTTATATCAGTGGCCGTGTCGATCCATTTGACTAC	AKMRYISGRVDPFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3722   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-23*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  V  S  G  G  G  A  S  R  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3722   91   AGTGGGTCTCAGCTGTTAGTGGTGGTGGTGCTAGCAGATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  95.2% (236/248)  IGHV3-23*01  137  ..............A........A......G.....C................................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  A  L  R  A  G  D  T  A  V  Y  F  C  A  K  M  R  Y  I  S  G  R  
                    Query_3722   181  AGAACACGCTGTATCTCCAAATGAACGCCTTGAGAGCCGGGGACACGGCCGTATATTTCTGTGCGAAAATGCGTTATATCAGTGGCCGTG  270
V  95.2% (236/248)  IGHV3-23*01  227  ................G.........AG.C.........A.................A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  91.7% (11/12)    IGHD6-19*01  4    --------------------------------------------------------------------------....G.......----  15

                                      ---------------->                                  
                                      V  D  P  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_3722   271  TCGATCCATTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  321
J  97.7% (42/43)    IGHJ4*02     6    --------.....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_6005

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           403     1e-114
IGHD4-17*01                                                                                           18.0    0.69  
IGHJ6*01                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAG	CTACGGTGA	GTCCGAGTACTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTC	ARDLATVSPSTFYYGMDV	292	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	10	78	69	67	2	0	97.1
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  T  S  Y 
                    Query_3723   10   CAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCTTCTGGTTACACCTTTACCAGTTAC  99
V  94.5% (274/290)  IGHV1-18*04  7    ....................T..........................................G......................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_3723   100  GGTATCACTTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  189
V  94.5% (274/290)  IGHV1-18*04  97   .......GC........A..............A................................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  S  D  D  T  A 
                    Query_3723   190  ATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGATCTGACGACACGGCC  279
V  94.5% (274/290)  IGHV1-18*04  187  .A.C...A..G.................C....................C..........C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  T  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_3723   280  GTGTATTACTGTGCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTCTGGGGTCAAGGGACCACGGTCACC  369
V  94.5% (274/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------.........--------------------------------------------------------  12
J  98.1% (52/53)    IGHJ6*01     11   -----------------------------------------------........................G..................  53

                                                
                                       V  S  S  
                    Query_3723   370  GTCTCCTCAG  379
J  98.1% (52/53)    IGHJ6*01     54   ..........  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_6004

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGCAGTTAC	CTTTAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGCAGTTACCTTTATTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_3724   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTACAAACTA  90
V  94.5% (275/291)  IGHV5-51*01  6    .................................................................G...........G......C.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  D  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_3724   91   CTGGATCGACTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGGGACTCTGATGCCAGATACAGCCC  180
V  94.5% (275/291)  IGHV5-51*01  96   ........G.........................................................T.........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  L  E  G  Q  I  T  I  S  A  D  N  S  I  G  T  A  Y  L  Q  L  H  S  L  K  A  S  D  T  A
                    Query_3724   181  GTCCCTCGAAGGCCAAATCACCATCTCAGCCGACAACTCCATCGGCACCGCCTACCTGCAGTTGCACAGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (275/291)  IGHV5-51*01  186  ....T..C.......GG...................G......A..................G.AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_3724   271  CATGTATTACTGTGCGAGACATGGGGATGATAGTGGCAGTTACCTTTATTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  94.5% (275/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD1-26*01  4    -----------------------------.......G..C...-----------------------------------------------  17
J  98.1% (53/54)    IGHJ6*02     9    -------------------------------------------------....A....................................  49

                                                   
                                        T  V  S  S 
                    Query_3724   361  CACCGTCTCCTCA  373
J  98.1% (53/54)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_264173

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           367     6e-104
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3725   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3725   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.2% (242/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_3725   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  97.2% (242/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_3725   271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_6001

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           402     3e-114
IGHD4-17*01                                                                                           19.9    0.17  
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGAGTC	CGGTGACTAC	GTGATGAGG	GACCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGAGTCCGGTGACTACGTGATGAGGGACCCC	ARGESGDYVMRDP	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	275	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  G  S  G  F  S  F  T  
                    Query_3726   3    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGGGTTCTGGATTCAGTTTTACCA  92
V  93.9% (275/293)  IGHV5-51*03  2    ....G.....G.......................................................A...........A...C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  Y  P  S  D  S  D  T  R  Y  
                    Query_3726   93   CCTACTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATATACCCTAGTGACTCTGACACCAGATATA  182
V  93.9% (275/293)  IGHV5-51*03  92   G..........................T.................................C..T...G..........T........C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  N  S  L  R  A  S  D  
                    Query_3726   183  GTCCGTCCTTCCAAGGCCAGGTCACCATCTCGGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAACAGCCTGAGGGCCTCGGACA  272
V  93.9% (275/293)  IGHV5-51*03  182  .C.............................A.....................................G........A...........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      S  A  M  Y  Y  C  A  R  G  E  S  G  D  Y  V  M  R  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3726   273  GCGCCATGTATTATTGTGCGAGAGGGGAGTCCGGTGACTACGTGATGAGGGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  362
V  93.9% (275/293)  IGHV5-51*03  272  C............C.........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD4-17*01  7    -------------------------------..........-------------------------------------------------  16
J  100.0% (40/40)   IGHJ5*02     12   --------------------------------------------------........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_264170

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GCCTC	TATTACTTTCGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGCCTCTATTACTTTCGTTCGGGGAGTTATTTTGACTTC	ARGLYYFRSGSYFDF	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  N  W  V  R  Q  H  P  G  K  G 
                    Query_3727   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAACTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ...............................G.............................G....A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  F  S  V  S  V  D  T  S 
                    Query_3727   91   CTGGAGTGGATTGGGCACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGATTTAGCGTTTCAGTAGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ...............T..................G...............................G...C.A.A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  F  R  S 
                    Query_3727   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGCCTCTATTACTTTCGTTCG  270
V  96.0% (240/250)  IGHV4-31*03  229  .................................................................G....--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (22/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------.......A.G.....  16

                                      ----------------->                                  
                                       G  S  Y  F  D  F  W  G  P  G  T  L  V  P  V  S  S  
                    Query_3727   271  GGGAGTTATTTTGACTTCTGGGGCCCGGGAACCCTGGTCCCCGTCTCCTCAG  322
D  91.7% (22/24)    IGHD3-10*01  17   .........-------------------------------------------  25
J  93.0% (40/43)    IGHJ4*02     6    ---------.......A........A.............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_6009

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           263     2e-72
IGHD2-8*02                                                                                            16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGATGCGGCGGAGTGAATTCGGC	ACTGGTGG	GG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATGCGGCGGAGTGAATTCGGCACTGGTGGGGACTTCTTTGGCCAC	ARMRRSEFGTGGDFFGH	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	20	10	0	66.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	94	20	0	82.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	207	39	0	84.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  R  S  V  S  S  L  W  S  W  V  R  Q  D  P  G  K  G 
                    Query_3728   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTGAGGAGTGTGTCTTCCCTCTGGAGCTGGGTCCGCCAGGACCCAGGGAAGGGC  90
V  84.1% (207/246)  IGHV4-31*03  49   ....................................A.C..C....GTGG..A.TA..........A........C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  R  Y  Y  S  G  S  S  R  Y  N  P  S  L  G  S  R  V  S  M  S  L  D  T  S 
                    Query_3728   91   CTGGAGTGGATTGGTTACAGGTATTACAGTGGAAGTAGTCGGTATAATCCGTCCCTCGGGAGTCGAGTTTCCATGTCACTAGACACGTCT  180
V  84.1% (207/246)  IGHV4-31*03  139  ..............G....TC...........G..C.CCTAC..C..C.........AA..........A....A...G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       R  N  Q  F  S  L  K  L  T  S  V  T  T  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  F  G 
                    Query_3728   181  AGGAACCAATTTTCCCTGAAGTTGACCTCAGTGACGACCGCGGACACGGCCATCTATTACTGTGCGCGGATGCGGCGGAGTGAATTCGGC  270
V  84.1% (207/246)  IGHV4-31*03  229  .A......G..C.........C...G...T.....TG..............G.G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      MGT-------------------->                                  
                                       T  G  G  D  F  F  G  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_3728   271  ACTGGTGGGGACTTCTTTGGCCACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  328
D  100.0% (8/8)     IGHD2-8*02   11   ........--------------------------------------------------  18
J  91.7% (44/48)    IGHJ4*02     1    ----------...A.....A.T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_6008

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           403     1e-114
IGHD3-22*01                                                                                           27.6    9e-04 
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCGGATC	ACTATGATAGTGGTGGT	C	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCGGATCACTATGATAGTGGTGGTCACTACTACTATAATATGGACGTC	ARVPDHYDSGGHYYYNMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  A  T  N  Y
                    Query_3729   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCGCCACCAACTA  90
V  94.5% (274/290)  IGHV1-69*01  6    ..................G............................................................TT..G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  L  L  I  L  M  F  D  T  P  N  Y  A  Q
                    Query_3729   91   TGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACTGCTCATCCTTATGTTTGATACACCAAACTACGCACA  180
V  94.5% (274/290)  IGHV1-69*01  96   ..C.................................................GG.A......C...C....G....G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  V  S  N  L  R  S  E  D  T  A
                    Query_3729   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGGTGAGCAACCTGAGATCTGAGGACACGGC  270
V  94.5% (274/290)  IGHV1-69*01  186  .............................................................C......G.....................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        V  Y  Y  C  A  R  V  P  D  H  Y  D  S  G  G  H  Y  Y  Y  N  M  D  V  W  G  Q  G  T  T  V
                    Query_3729   271  CGTTTATTACTGTGCGAGAGTTCCGGATCACTATGATAGTGGTGGTCACTACTACTATAATATGGACGTCTGGGGCCAAGGGACCACAGT  360
V  94.5% (274/290)  IGHV1-69*01  276  ...G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  94.1% (16/17)    IGHD3-22*01  6    -----------------------------...........A.....--------------------------------------------  22
J  92.9% (52/56)    IGHJ6*02     7    -----------------------------------------------..........CGG...........................G..  49

                                                   
                                        T  V  S  S 
                    Query_3729   361  CACCGTCTCCTCA  373
J  92.9% (52/56)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_115987

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           319     2e-89
IGHD2-21*02                                                                                           10.3    116  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_3730   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  91.8% (224/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  T  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_3730   91   TGGACTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (224/244)  IGHV4-59*08  139  ....T..G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_3730   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  91.8% (224/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_3730   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_115986

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	247	223	21	3	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_3731   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  87
V  90.3% (223/247)  IGHV4-4*02   49   ..................GC.........T...TCC......A..AG........GG.......................G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  K 
                    Query_3731   88   GAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCAAG  177
V  90.3% (223/247)  IGHV4-4*02   139  .......................T......A................................G.......A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G  W 
                    Query_3731   178  AATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGTGGGTAGCAGTGGCTGG  267
V  90.3% (223/247)  IGHV4-4*02   229  ..CC.GT..........G....GC..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-19*01  6    -----------------------------------------------------------------------------.............  18

                                      -------->                                
                                       L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_3731   268  CTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  308
J  95.0% (38/40)    IGHJ4*02     7    -......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_115985

Length=407
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           367     7e-104
IGHD1-26*01                                                                                           10.3    144   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTGTGAATAGAGAGAGGCCAAAG	GTGGG	CTTTGAGTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTGTGAATAGAGAGAGGCCAAAGGTGGGCTTTGAGTTCTACGATATGGACGTC	ARAVNRERPKVGFEFYDMDV	289	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	69	6	0	92
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	46	5	0	90.2
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	103	11	0	90.4
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	265	30	0	89.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  R  R  P  G  S  S  V  R  V  S  C  K  A  S  G  D  S  F  S 
                    Query_3732   1    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAGGCCTGGGTCCTCGGTGAGGGTCTCCTGTAAGGCTTCTGGAGACAGCTTCAGC  90
V  89.8% (265/295)  IGHV1-69*06  1    .....G.................G..........A..A.................A.........C.............G..C.......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  S  A  V  S  W  V  R  Q  A  P  G  Q  G  L  Q  W  M  G  G  I  T  P  V  F  G  T  P  N  Y 
                    Query_3732   91   ACCTCTGCTGTCAGTTGGGTGCGGCAGGCCCCTGGACAAGGACTTCAGTGGATGGGAGGGATCACCCCTGTCTTTGGCACACCAAACTAC  180
V  89.8% (265/295)  IGHV1-69*06  91   .G..A....A....C........A.................G...G..................T....A.......T...G........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  P  N  F  Q  A  R  V  T  I  T  A  D  K  S  T  S  T  V  Y  M  E  L  T  R  L  T  S  E  D 
                    Query_3732   181  GCACCGAACTTCCAGGCCAGAGTCACGATTACCGCGGACAAATCCACGAGTACAGTCTATATGGAGCTGACCAGACTGACATCTGAGGAC  270
V  89.8% (265/295)  IGHV1-69*06  181  ....A...G.......G.................................C....C...C..........G...C....G..........  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  M  Y  Y  C  A  R  A  V  N  R  E  R  P  K  V  G  F  E  F  Y  D  M  D  V  W  G  Q  G 
                    Query_3732   271  ACGGCCATGTATTATTGTGCGAGAGCTGTGAATAGAGAGAGGCCAAAGGTGGGCTTTGAGTTCTACGATATGGACGTCTGGGGCCAAGGG  360
V  89.8% (265/295)  IGHV1-69*06  271  ......G.......C..........-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD1-26*01  7    ------------------------------------------------.....-------------------------------------  11
J  95.9% (47/49)    IGHJ6*02     14   --------------------------------------------------------------.....G......................  41

                                                           
                                       T  T  V  I  V  S  S 
                    Query_3732   361  ACCACGGTCATCGTCTCCTCA  381
J  95.9% (47/49)    IGHJ6*02     42   ..........C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39867768


Query= Query_115984

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           350     9e-99
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGCCGAAATC	GTATTACGACTTTTGGA	ATCCTTATTCTCGGCTCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCGAAATCGTATTACGACTTTTGGAATCCTTATTCTCGGCTCCTTCGACCCC	ARGGRNRITTFGILILGSFDP	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3733   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_3733   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTGGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*03  139  ..................................G.................................T.....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  G  R  N  R  I  T 
                    Query_3733   181  AAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCTGTATATTTCTGTGCGAGAGGGGGCCGAAATCGTATTACG  270
V  94.8% (237/250)  IGHV4-31*03  229  .....................C...G........................C..G....A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.1% (16/17)    IGHD3-3*01   1    ----------------------------------------------------------------------------------........  8

                                      CDR3-IMGT-------------------------->                                  
                                       T  F  G  I  L  I  L  G  S  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_3733   271  ACTTTTGGAATCCTTATTCTCGGCTCCTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  340
D  94.1% (16/17)    IGHD3-3*01   9    .T.......-------------------------------------------------------------  17
J  97.7% (42/43)    IGHJ5*02     9    ---------------------------.........................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_115983

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            333     1e-93
IGHD4-17*01                                                                                           25.7    0.003
IGHJ6*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	N/A	CTACGGTGACTAC	AGT	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACTACGGTGACTACAGTTACGACTATTACGGTATGGACGTC	ARDYGDYSYDYYGMDV	239	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	49	2	0	96.1
CDR2-IMGT	101	124	24	23	1	0	95.8
FR3-IMGT	125	238	114	110	4	0	96.5
CDR3-IMGT (germline)	239	246	8	7	1	0	87.5
Total	N/A	N/A	233	223	10	0	95.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  I  F  N  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  T  I 
                    Query_3734   14   TGTGCAGCCTCTGGATTCATCTTTAATAGCTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCACCATA  103
V  95.7% (223/233)  IGHV3-7*01   64   ...................C.....G...............C...........................................A....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_3734   104  AAGCAAGATGGAAGTGAGAAGTACTATGTGGACTCTGTGGAGGGCCGCTTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTC  193
V  95.7% (223/233)  IGHV3-7*01   154  ....................A..................A.......A..............A..........................G  243
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  G  D  Y  S  Y  D  Y  Y  G  M  D 
                    Query_3734   194  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGGACTACGGTGACTACAGTTACGACTATTACGGTATGGAC  283
V  95.7% (223/233)  IGHV3-7*01   244  ..................................................A..-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (13/13)   IGHD4-17*01  4    -----------------------------------------------------.............------------------------  16
J  96.5% (55/57)    IGHJ6*02     6    ---------------------------------------------------------------------...T....C............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3734   284  GTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  319
J  96.5% (55/57)    IGHJ6*02     27   ....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_115982

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           330     1e-92
IGHD1-1*01                                                                                            18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAG	TGGAACGAC	GGG	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGAGTGGAACGACGGGGACGAC	ARHEWNDGDD	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	231	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  N  N  L  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_3735   1    ACTCTGTCCCTCACCTGCAGTGTCTCTGGAGACTCCATCAGCAATAATCTTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  92.0% (231/251)  IGHV4-39*01  49   ..C................C.........T.G...........G..G.AG.......................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  A  I  Y  Y  T  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3735   91   CTGGAGTGGATTGGAGCTATCTATTATACTGGAAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  92.0% (231/251)  IGHV4-39*01  139  ..............GAG...........G...G.G.......................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       K  N  K  F  S  L  K  L  T  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  H  E  W  N  D  G  D 
                    Query_3735   181  AAGAACAAGTTCTCCCTGAAGCTGACCTCTGCCACCGCCGCAGACACGGCTGTGTACTACTGTGCGAGACATGAGTGGAACGACGGGGAC  270
V  92.0% (231/251)  IGHV4-39*01  229  ......C..................G.....TG.......................T..............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD1-1*01   9    ---------------------------------------------------------------------------.........------  17
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3735   271  GACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_115981

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           321     6e-90
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_3736   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_3736   91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_3736   181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.8% (225/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_3736   271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_115980

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           413     2e-117
IGHD1-20*01                                                                                           29.5    2e-04 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-20*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGAAAA	TATAACTGGAACGAC	GGAAT	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATC	ARVGKYNWNDGIAFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N  S  F
                    Query_3737   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAACAGCTT  90
V  95.5% (277/290)  IGHV1-69*01  6    ..................G.......................C........................................G.....A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  N  W  V  R  Q  A  P  G  H  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  K  Y  A  Q
                    Query_3737   91   TGCTGTCAACTGGGTGCGACAGGCCCCTGGACATGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAACAAAATACGCACA  180
V  95.5% (277/290)  IGHV1-69*01  96   ....A...G........................A..........................................G....C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_3737   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGGACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.5% (277/290)  IGHV1-69*01  186  .............................................C....C.......................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  V  G  K  Y  N  W  N  D  G  I  A  F  D  I  W  G  Q  G  T  I  V  T  V  S
                    Query_3737   271  CGTTTATTATTGTGCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATCTGGGGCCAAGGGACAATAGTCACCGTCTC  360
V  95.5% (277/290)  IGHV1-69*01  276  ...G.....C..........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (15/15)   IGHD1-20*01  3    ----------------------------...............-----------------------------------------------  17
J  95.7% (45/47)    IGHJ3*02     4    ------------------------------------------------...T..........................G...........  45

                                           
                                        S  
                    Query_3737   361  TTCAG  365
J  95.7% (45/47)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_7387

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           304     9e-85
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTTGT	ACCTACCA	TGACTACGGT	CTCCAGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCTACCATGACTACGGTCTCCAGTTCTACTTTCGCCAT	TYHDYGLQFYFRH	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	102	12	0	89.5
Total	N/A	N/A	242	218	24	0	90.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  P  F  S  D  Y  G  F  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3738   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCCCCTTCAGTGACTATGGCTTTCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  90.1% (218/242)  IGHV3-30*03  47   ................................T..A........AG.......A.G.............................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  V  S  Y  D  G  S  E  K  F  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_3738   91   AGTGGGTGGCAGTTGTCTCATATGATGGAAGTGAAAAGTTCTATGCAGACTCCGTGAAGGGCCGACTCACCATCTCCAGAGACAATTCCA  180
V  90.1% (218/242)  IGHV3-30*03  137  ..............A.A...............A.T..A.A.........................T........................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  V  Y  L  Q  M  S  R  L  R  A  E  D  S  A  V  Y  F  C  T  Y  H  D  Y  G  L  Q  F  
                    Query_3738   181  AGAACACTGTCTATCTGCAGATGAGCAGGCTGAGAGCTGAGGACTCGGCTGTCTATTTTTGTACCTACCATGACTACGGTCTCCAGTTCT  270
V  90.1% (218/242)  IGHV3-30*03  227  .......GC.G........A....A...C...............A.......G....AC...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (10/10)   IGHD4-17*01  1    ----------------------------------------------------------------------..........----------  10
J  89.4% (42/47)    IGHJ4*02     2    ----------------------------------------------------------------------------------------..  3

                                      ---------->                                  
                                      Y  F  R  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3738   271  ACTTTCGCCATTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  315
J  89.4% (42/47)    IGHJ4*02     4    .....GA.T.C...........A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_19516

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            355     3e-100
IGHD3-16*01                                                                                           12.2    31    
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGGC	GGGGGA	CCTACCGTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGCGGGGGACCTACCGTGTTTGACTAC	ARGGGGPTVFDY	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  S  K  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_3739   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGTAGTAAATGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  96.0% (237/247)  IGHV4-4*02   49   ...............................G..................C.......G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  Y  H  S  G  S  S  N  Y  S  P  S  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_3739   91   GAGTGGATTGGGGATATCTATCATAGTGGGAGCTCCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  96.0% (237/247)  IGHV4-4*02   139  ..............A..................A.........A..........A...................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  G  P  T  V  F 
                    Query_3739   181  AATCAGTTCTCCCTGAAGCTGACATCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCGGCGGGGGACCTACCGTGTTT  270
V  96.0% (237/247)  IGHV4-4*02   229  ..C...................GC...........................................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------------......------------  23
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3739   271  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (43/43)   IGHJ4*02     9    ........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_115989

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD6-25*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTC	ARQSSAGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	63	7	0	90
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	268	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  G  S  L  K  I  S  C  R  S  S  G  Y  D  F  L  D  Y
                    Query_3740   1    GCAGCTGGTGCAGTCTGGAGCAGAGCTAAAGAAGCCGGGGGGGTCTCTGAAGATCTCCTGTAGGAGTTCTGGGTACGACTTTCTCGACTA  90
V  92.1% (268/291)  IGHV5-51*01  6    .........................G.G..A.....C....A....................A.G.......A...AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_3740   91   CTGGATCGTCTGGGTGCGCCAAATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGTCC  180
V  92.1% (268/291)  IGHV5-51*01  96   ........G............G..........................................................G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  A
                    Query_3740   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGCGCAGTCTGAAGGCCTCGGACACCGC  270
V  92.1% (268/291)  IGHV5-51*01  186  .............................C...............C..................A....C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_3740   271  CAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  360
V  92.1% (268/291)  IGHV5-51*01  276  ..T..................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  100.0% (48/48)   IGHJ6*02     15   -------------------------------------------...............................................  61

                                       
                                       
                    Query_3740   361  A  361
J  100.0% (48/48)   IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_115988

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           285     4e-79
IGHD4-17*01                                                                                           12.2    32   
IGHJ2*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAATAGTTTTTATCCCCCGTCG	GACTAC	TT	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATAATAGTTTTTATCCCCCGTCGGACTACTTCTTCGATCTC	ARDNSFYPPSDYFFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	15	9	0	62.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	216	34	0	86.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  D  F  K  K  F  N  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3741   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCGACTTCAAGAAGTTCAACATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  86.4% (216/250)  IGHV3-21*01  47   ....................G..............AC.....GT.GC.AT.G...........................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  G  R  S  N  D  I  H  Y  G  A  S  V  K  G  R  F  S  I  S  R  D  N  A  
                    Query_3741   91   AGTGGGTCTCTTCAATTAGGGGTCGGAGTAATGACATACATTATGGAGCCTCAGTGAAGGGCCGATTCTCCATCTCCAGAGACAACGCCA  180
V  86.4% (216/250)  IGHV3-21*01  137  ..........A..C.....TA..A.T....G.T.....T.C..C.C..A...................A.....................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  N  S  L  Y  L  H  M  N  S  L  G  A  E  D  T  A  I  Y  F  C  A  R  D  N  S  F  Y  P  P  
                    Query_3741   181  ACAACTCCCTGTATCTCCACATGAACAGCCTGGGAGCCGAGGACACGGCTATCTATTTCTGTGCCAGAGATAATAGTTTTTATCCCCCGT  270
V  86.4% (216/250)  IGHV3-21*01  227  .G.....A........G..A............A.................G.G....A......G.....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      T------------------>                                  
                                      S  D  Y  F  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3741   271  CGGACTACTTCTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  100.0% (6/6)     IGHD4-17*01  2    --......----------------------------------------------  7
J  100.0% (44/44)   IGHJ2*01     10   ----------............................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_301794

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTCC	AEEKRRVPRGTFHS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  T  Y  A  V  S  W  V  R  Q  T  P  G  K  G  L  
                    Query_3742   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCGTGAGCTGGGTCCGCCAGACTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-23*01  47   ................................T.........G..G.......A.................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  G  G  A  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  
                    Query_3742   91   AGTGGGTCTCAGCCATTAGTGGTGGTGGTGCTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGA  180
V  94.8% (237/250)  IGHV3-23*01  137  .............T.........A......G...............................................G.........C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  R  L  R  A  D  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  
                    Query_3742   181  AGAACACGCTGTATCTGCAAATGAACAGACTGAGAGCCGACGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGG  270
V  94.8% (237/250)  IGHV3-23*01  227  ............................C...........G........................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------------------------......------------  17

                                      ------------->                                  
                                      G  T  F  H  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3742   271  GAACCTTTCACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  95.5% (42/44)    IGHJ4*02     5    ----....G...A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_301797

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           322     2e-90
IGHD4-17*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCGGCAATGACTACAC	TGAGTACGGTGA	GGCCGCACCCCGGGAGGTG	GGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCGGCAATGACTACACTGAGTACGGTGAGGCCGCACCCCGGGAGGTGGGTCTGGACGTC	ARDGGNDYTEYGEAAPREVGLDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  G  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3743   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAATGGTTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-33*01  47   ..........................................G.A.C....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  F  D  G  N  R  K  D  Y  G  D  S  V  K  G  R  F  I  I  S  R  D  N  F  
                    Query_3743   91   AGTGGGTGGCAATTATATGGTTTGATGGAAATAGGAAAGACTATGGAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTTTA  180
V  91.2% (228/250)  IGHV3-33*01  137  ...........G.........A........G..AT...T......C.......................C.................CC.  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      N  N  K  V  Y  L  E  T  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  G  N  D  Y  T  
                    Query_3743   181  ACAATAAGGTGTATCTGGAAACGAATAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATGGCGGCAATGACTACACTG  270
V  91.2% (228/250)  IGHV3-33*01  227  .G..C.C.C........C...T...C..........................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD4-17*01  1    ----------------------------------------------------------------------------------------..  2

                                      --CDR3-IMGT----------------------------->                                 
                                      E  Y  G  E  A  A  P  R  E  V  G  L  D  V  W  G  Q  G  T  T  D  T  V  S  S 
                    Query_3743   271  AGTACGGTGAGGCCGCACCCCGGGAGGTGGGTCTGGACGTCTGGGGCCAAGGGACCACGGACACCGTCTCCTCA  344
D  91.7% (11/12)    IGHD4-17*01  3    .C........----------------------------------------------------------------  12
J  95.6% (43/45)    IGHJ6*02     18   -----------------------------...A...........................T.............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_301791

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           353     9e-100
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TCTGTCCCCG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGTCCCCGGACTAC	ARDLSPDY	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  S  D  Y  F  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_3744   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATGTTCAGTGACTACTTCATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-11*01  47   ....................................CC.............A......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  S  S  G  R  S  I  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  S  A  
                    Query_3744   91   AGTGGGTTTCACACATTAGTAGTAGTGGTAGAAGCATATACTACGCAGACTCTGTGGAGGGCCGATTCACCATCTCCAGGGACAGCGCCA  180
V  95.2% (238/250)  IGHV3-11*01  137  ...........T...................T.C......................A...........................A.....  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  L  S  P  D  Y  W  
                    Query_3744   181  AGAACTCACTATTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCTTGTATTATTGTGCGAGAGATCTGTCCCCGGACTACTGGG  270
V  95.2% (238/250)  IGHV3-11*01  227  ..........G.A.....................................G.......C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (40/40)   IGHJ4*02     9    --------------------------------------------------------------------------------..........  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_3744   271  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  300
J  100.0% (40/40)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_301790

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD3-16*02                                                                                           18.0    0.67  
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*02	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATGATGGTGGC	AGTTATCTTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATGGTGGCAGTTATCTTTATTACTTCTACGGTATGGACGTC	RDMGMMVAVIFITSTVWTS	281	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	67	64	61	2	1	95.3
CDR1-IMGT	68	91	24	22	2	0	91.7
FR2-IMGT	92	142	51	50	1	0	98
CDR2-IMGT	143	166	24	23	1	0	95.8
FR3-IMGT	167	280	114	105	9	0	92.1
CDR3-IMGT (germline)	281	288	8	8	0	0	100
Total	N/A	N/A	285	269	15	1	94.4


Alignments

                                      <---------------------------FR1-IMGT---------------------------><-------CDR1-IMGT------><-
                                        V  Q   L  V  Q  R  *  K  S  P  G  S  L  *  R  S  P  V  R  L  L  D  T  P  L  P  T  T  G  
                    Query_3745   5    GGTGCAG-CTGGTGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTACCAACTACTGGAT  93
V  94.4% (269/285)  IGHV5-51*01  12   .......T....A..............................................G...........G........G.........  101
                                        V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W  I

                                      -------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------------
                                      S  T  G  C  A  R  C  P  G  K  A  W  S  G  W  G  S  S  I  L  V  T  L  M  P  D  T  A  R  P  
                    Query_3745   94   CGACTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCCGTCCTT  183
V  94.4% (269/285)  IGHV5-51*01  102  ..G...................................................................A...................  191
                                        G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S  F

                                      ------------------------------------FR3-IMGT----------------------------------------------
                                      S  K  A  K  S  P  S  Q  P  T  T  P  S  A  P  P  T  C  S  C  T  A  *  R  P  R  T  P  P  C  
                    Query_3745   184  CGAAGGCCAAATCACCATCTCAGCCGACAACTCCATCGGCACCGCCTACCTGCAGTTGCACAGCCTGAAGGCCTCGGACTCCGCCATGTA  273
V  94.4% (269/285)  IGHV5-51*01  192  .C.......GG...................G......A..................G.AG...................A..........  281
                                        Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M  Y

                                      ------><-----------------------CDR3-IMGT----------------------->                          
                                      I  T  V  R  D  M  G  M  M  V  A  V  I  F  I  T  S  T  V  W  T  S  G  A  K  G  P  R  S  P  
                    Query_3745   274  TTACTGTGCGAGACATGGGGATGATGGTGGCAGTTATCTTTATTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  363
V  94.4% (269/285)  IGHV5-51*01  282  ...............---------------------------------------------------------------------------  296
                                        Y  C  A  R                                                                              
D  91.7% (11/12)    IGHD3-16*02  23   -------------------------------.......G....-----------------------------------------------  34
J  98.1% (53/54)    IGHJ6*02     9    -------------------------------------------....A..........................................  55

                                             
                                      S  P   
                    Query_3745   364  CTCCTCA  370
J  98.1% (53/54)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_301792

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGGGAA	AACGAC	TGGGATCGTAGGTGGTCCGGT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGGGAAAACGACTGGGATCGTAGGTGGTCCGGTTTTCACTTC	ASRENDWDRRWSGFHF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	224	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3746   1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.6% (224/242)  IGHV4-59*08  49   ....................T......................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       L  I  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S  R  N 
                    Query_3746   91   TTGATTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGTCGACTCACCATCTCAGTAGACACGTCGAGGAAC  180
V  92.6% (224/242)  IGHV4-59*08  139  .G......G...A........A........A.....................A.......G.......A..............C.A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  S  S  L  S  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  N  D  W  D  R  R  W 
                    Query_3746   181  CAGTCCTCCCTGAGCGTGAACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCGAGCCGGGAAAACGACTGGGATCGTAGGTGG  270
V  92.6% (224/242)  IGHV4-59*08  229  ....T........AGC...G.........C................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD1-1*01   12   ---------------------------------------------------------------------......---------------  17

                                      -------------->                                  
                                       S  G  F  H  F  W  G  P  G  T  L  V  T  V  S  S  
                    Query_3746   271  TCCGGTTTTCACTTCTGGGGTCCGGGAACCCTGGTCACCGTCTCCTCAG  319
J  90.7% (39/43)    IGHJ4*02     6    ------...G...A......C.A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_301799

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           343     2e-96
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGGTCC	ATTACTATGATAGTA	CTTCTTACTACGGGAGTCGGTTCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGGTCCATTACTATGATAGTACTTCTTACTACGGGAGTCGGTTCCACTTTGACTAC	ARVVHYYDSTSYYGSRFHFDY	246	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_3747   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCGTCAGTAGTGGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGAC  93
V  94.3% (233/247)  IGHV4-61*01  50   .....TCC...A....C.......................C........................A........................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  
                    Query_3747   94   TGGAGTGGATTGGGTACATCTATTACAGAGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTGGACACGTCCA  183
V  94.3% (233/247)  IGHV4-61*01  140  ................T...........T....G.......................................A.....A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  V  H  Y  Y  D  S  
                    Query_3747   184  AGAACCAGTTCTCCCTGCAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGGTGGTCCATTACTATGATAGTA  273
V  94.3% (233/247)  IGHV4-61*01  230  .................A..C..............................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (15/15)   IGHD3-22*01  3    ---------------------------------------------------------------------------...............  17

                                      DR3-IMGT-------------------------->                                  
                                      T  S  Y  Y  G  S  R  F  H  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_3747   274  CTTCTTACTACGGGAGTCGGTTCCACTTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  342
J  97.8% (44/45)    IGHJ4*02     4    ------------------------.......................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_152735

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           280     1e-77
IGHD3-16*02                                                                                           27.6    9e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GATAG	GTCTTCTTATCGAAGACCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATAGGTCTTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	AIGLLIEDPTYVWGSFRRNHDSFNV	261	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	41	10	0	80.4
CDR2-IMGT	126	146	21	16	5	0	76.2
FR3-IMGT	147	260	114	92	22	0	80.7
CDR3-IMGT (germline)	261	267	7	6	1	0	85.7
Total	N/A	N/A	267	223	44	0	83.5


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  W  
                    Query_3748   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCACTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGTGGC  90
V  83.5% (223/267)  IGHV4-59*01  26   ................T..............C..............C.......G.......A...G..........AG......CC...  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  R  G  L  E  W  L  G  F  F  F  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  
                    Query_3748   91   AGCCTCCAGGGAGGGGACTGGAGTGGCTTGGCTTCTTCTTCTCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCC  180
V  83.5% (223/267)  IGHV4-59*01  116  ....C.......A.............A....G.ATA...AT.A..G..........A..............C...A......A......A  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      L  S  G  D  I  S  R  N  Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  I  G  
                    Query_3748   181  TGTCAGGAGACATTTCTAGGAATCAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGATAGGTC  270
V  83.5% (223/267)  IGHV4-59*01  206  .A....T.....CG..C.A...C.....C.....G..G....G.TC......................GTG....A........G..---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -----------------------CDR3-IMGT-------------------------------->                         
                                      L  L  I  E  D  P  T  Y  V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  
                    Query_3748   271  TTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCG  360
D  94.1% (16/17)    IGHD3-16*02  14   -----------------------.............A...--------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    --------------------------------------------------------...G....................AT........  41

                                               
                                      V  S  S  
                    Query_3748   361  TCTCTTCAG  369
J  93.0% (40/43)    IGHJ3*01     42   .........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_34795

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            366     2e-103
IGHD3-22*01                                                                                           27.6    8e-04 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTTTG	ACTATGATAGTCGTGGCTTTTAC	AGACGTTCTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTTTGACTATGATAGTCGTGGCTTTTACAGACGTTCTAACTACTTTGACTTC	ARGFDYDSRGFYRRSNYFDF	264	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	77	27	23	4	0	85.2
FR2-IMGT	78	128	51	50	1	0	98
CDR2-IMGT	129	149	21	21	0	0	100
FR3-IMGT	150	263	114	105	9	0	92.1
CDR3-IMGT (germline)	264	268	5	5	0	0	100
Total	N/A	N/A	268	251	17	0	93.7


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  I  T  C  T  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  
                    Query_3749   1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCATCACCTGCACTGTCTCTGGTGGCTCCATCACTACTAGTAATTGGTGGAGTTGGGTTC  90
V  93.7% (251/268)  IGHV4-4*02   26   ................T...............C........G.....................GC.G......C..............C.  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  Q  Y  N  P  S  L  K  S  R  V  
                    Query_3749   91   GCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCCAGTACAACCCGTCACTCAAGAGTCGAGTCA  180
V  93.7% (251/268)  IGHV4-4*02   116  ...........................................................A.C...........C................  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  I  S  V  D  K  S  K  N  Q  I  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  
                    Query_3749   181  CGATATCAGTAGACAAGTCCAAGAACCAGATCTCCCTGAGGTTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGG  270
V  93.7% (251/268)  IGHV4-4*02   206  .C...........................T.........A.C....C...............................A.........--  293
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A     

                                      -------------------CDR3-IMGT------------------------>                                  
                                      G  F  D  Y  D  S  R  G  F  Y  R  R  S  N  Y  F  D  F  W  G  R  G  T  L  V  A  V  S  S  
                    Query_3749   271  GCTTTGACTATGATAGTCGTGGCTTTTACAGACGTTCTAACTACTTTGACTTCTGGGGCCGGGGAACCCTGGTCGCTGTCTCCTCAG  357
D  87.0% (20/23)    IGHD3-22*01  6    ------...........A....T.A....----------------------------------------------------------  28
J  91.7% (44/48)    IGHJ4*02     1    ---------------------------------------............A........A.............A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_149081

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           297     7e-83
IGHD2-8*01                                                                                            10.3    120  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACGGGTCAGCAATTGGCCC	CTAAT	CTTGAGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATACGGGTCAGCAATTGGCCCCTAATCTTGAGTCA	VRDTGQQLAPNLES	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  D  T  F  S  I  F  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3750   1    GGTCCCTGAGACTCTCCTGTGAAGGATCTGGAGACACTTTTAGCATTTTCTGGATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  88.0% (220/250)  IGHV3-74*01  47   .....................C..CC......TT...C..C..T.GC.A.....................A...................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  H  V  G  T  I  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3750   91   TTTGGGTCTCACGCATTAATCATGTTGGGACAATCACAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  88.0% (220/250)  IGHV3-74*01  137  .G...........T......AG..A.....GT.G.....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  F  C  V  R  D  T  G  Q  Q  L  A  
                    Query_3750   181  AGAACACCCTCTATCTGCAAATGAACAGTCTGAGAGCCGACGACACGGCAGTATATTTTTGTGTCAGAGATACGGGTCAGCAATTGGCCC  270
V  88.0% (220/250)  IGHV3-74*01  227  .......G..G.............................G........T..G....AC....CA.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ------------->                                  
                                      P  N  L  E  S  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3750   271  CTAATCTTGAGTCATGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (5/5)     IGHD2-8*01   12   .....-------------------------------------------  16
J  97.1% (33/34)    IGHJ4*02     15   --------------.......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_149080

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           276     3e-76
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	210	34	0	86.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E  
                    Query_3751   4    CCCTGAGACTCTCCTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAGT  93
V  86.1% (210/244)  IGHV4-34*01  50   .....TCC...A..........CTA..G..G......C.................C...A.C....................G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  F  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K  
                    Query_3751   94   GGTTTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAAC  183
V  86.1% (210/244)  IGHV4-34*01  140  ..A............A............CA.C.AC......C..T......A...............A....................C.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W  
                    Query_3751   184  AAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGT  273
V  86.1% (210/244)  IGHV4-34*01  230  .GT...........C..A......T.....................G.....C......A....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------......-------------------  18
J  98.0% (49/50)    IGHJ5*02     2    ----------------------------------------------------------------------------------........  9

                                      ------->                                  
                                      F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3751   274  TCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  315
J  98.0% (49/50)    IGHJ5*02     10   ......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_149087

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           343     2e-96
IGHD6-13*01                                                                                           21.8    0.041
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  L  S  G  G  S  I  S  S  G  G  F  Y  W  N  W  I  R  Q  H  P  G  K  G  
                    Query_3752   4    CCCTGAGACTCTCCTGTACTCTCTCTGGTGGCTCCATCAGCAGTGGTGGTTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  94.0% (234/249)  IGHV4-31*02  50   .....TCC...A........G..............................A........G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  H  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  
                    Query_3752   94   TGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCTA  183
V  94.0% (234/249)  IGHV4-31*02  140  ....................T..................A.................................A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V  
                    Query_3752   184  AGAACCAATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTAG  273
V  94.0% (234/249)  IGHV4-31*02  230  .......G..........A.....GC...............................A...........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  11   -----------------------------------------------------------------------...........--------  21

                                      ---------------->                                  
                                      G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3752   274  GCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
J  98.0% (48/49)    IGHJ3*01     2    --.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_152730

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           410     1e-116
IGHD3-10*01                                                                                           12.2    37    
IGHJ2*01                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGACCGCAGAGATGGCAAAA	TTCGGG	TG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGACCGCAGAGATGGCAAAATTCGGGTGTACTGGTACTTCGGTCTC	ARGDRRDGKIRVYWYFGL	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_3753   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCAGGAGGCACCTTCAGCAGCTA  90
V  95.2% (276/290)  IGHV1-69*06  6    ..................G..................................................T....................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  V  P  V  L  R  T  A  N  Y  A  Q
                    Query_3753   91   TGTTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGGGGATCGTCCCTGTCCTTCGTACAGCGAACTACGCACA  180
V  95.2% (276/290)  IGHV1-69*06  96   ..C.....G..........................................A......A.....A..T..G.......A...........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  T  A  D  K  S  R  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_3753   181  GAAGTTCCAGGACAGAGTCACGATTACCGCGGACAAATCCAGGAGTACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.2% (276/290)  IGHV1-69*06  186  ...........G.............................C...C....C.......................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  G  D  R  R  D  G  K  I  R  V  Y  W  Y  F  G  L  W  G  R  G  T  L  V  T
                    Query_3753   271  CGTGTATTACTGTGCGAGAGGAGACCGCAGAGATGGCAAAATTCGGGTGTACTGGTACTTCGGTCTCTGGGGCCGTGGCACCCTGGTCAC  360
V  95.2% (276/290)  IGHV1-69*06  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-10*01  13   -----------------------------------------......-------------------------------------------  18
J  96.2% (50/52)    IGHJ2*01     2    -------------------------------------------------.............A...........................  42

                                                 
                                        V  S  S  
                    Query_3753   361  CGTCTCCTCAG  371
J  96.2% (50/52)    IGHJ2*01     43   T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_152733

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*03                                                                                           291     6e-81
IGHD2-15*01                                                                                           10.3    128  
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATAGA	TC	AGGAT	GTGAACATACCCGCTGGCCTCCGGCTCCACTTT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATAGATCAGGATGTGAACATACCCGCTGGCCTCCGGCTCCACTTTTACGGTCTGGACGTC	AIDQDVNIPAGLRLHFYGLDV	246	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	253	8	7	1	0	87.5
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  S  G  G  S  V  S  N  D  D  Y  F  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_3754   4    CCCTGAGACTCTCCTGCGCTGTGTCTGGTGGCTCCGTCAGTAATGATGATTACTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  87.2% (218/250)  IGHV4-61*03  50   .....TCC...A.....A....C.................C.G..G.AG.....A...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  S  K  S  G  I  T  K  S  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  
                    Query_3754   94   TGGAATGGATTGGCTACATCTCCAAAAGTGGGATCACCAAGTCCAACCCCTCCCTCAAGAGTCGAGTCTCCATCTCAGTTGACACGTCCA  183
V  87.2% (218/250)  IGHV4-61*03  140  ....G........G..T....ATT.C.......G......C.A.........................A....A.....A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      T  N  R  F  S  L  K  L  T  S  V  T  A  V  D  T  A  V  Y  Y  C  A  I  D  Q  D  V  N  I  P  
                    Query_3754   184  CGAACCGCTTCTCCCTGAAACTGACCTCTGTAACCGCTGTGGACACGGCCGTGTATTACTGTGCGATAGATCAGGATGTGAACATACCCG  273
V  87.2% (218/250)  IGHV4-61*03  230  A.....A............G....G......G.......C..........................G...--------------------  299
                                      K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-15*01  1    ------------------------------------------------------------------------.....-------------  5

                                      DR3-IMGT-------------------------->                                
                                      A  G  L  R  L  H  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_3754   274  CTGGCCTCCGGCTCCACTTTTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  340
J  97.9% (46/47)    IGHJ6*02     15   --------------------......A........................................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_34794

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         360     1e-101
IGHD5-18*01                                                                                           14.1    8.6   
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GAAG	ACAGATATGG	GGGACTTTGGACCTGCAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAAGACAGATATGGGGGACTTTGGACCTGCATTACTTTGACTTC	ARGRQIWGTLDLHYFDF	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_3755     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  F  Y  N  T  E  T  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  D  R  S 
                    Query_3755     91   CTGGAGTGGATTGGATACTTCTATAATACTGAGACCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCACTAGACAGGTCC  180
V  96.0% (240/250)  IGHV4-30-2*01  139  ..............G...A.....C...G..G..G.......................A...................G...........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  Q  I  W  G  T 
                    Query_3755     181  AAGAACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAAGACAGATATGGGGGACT  270
V  96.0% (240/250)  IGHV4-30-2*01  229  ...................A......C...........................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD5-18*01    7    --------------------------------------------------------------------------....C.....------  16

                                        MGT-------------------->                                  
                                         L  D  L  H  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3755     271  TTGGACCTGCATTACTTTGACTTCTGGGGCCAGGGCACCCTCGTCACCGTCTCCTCAG  328
J  93.5% (43/46)    IGHJ4*02       3    ------------..........A............A.....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_315776

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-19*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	261	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	20	1	0	95.2
FR3-IMGT	147	260	114	105	9	0	92.1
CDR3-IMGT (germline)	261	267	7	6	1	0	85.7
Total	N/A	N/A	267	248	19	0	92.9


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  
                    Query_3756   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACTTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGC  90
V  92.9% (248/267)  IGHV4-59*01  26   ................T....................C........................AG....T..............A......  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  
                    Query_3756   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACTA  180
V  92.9% (248/267)  IGHV4-59*01  116  .................................AT...T...................................A.............C.  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  
                    Query_3756   181  TATCAGTGGACACGTCCAAGAATCAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTA  270
V  92.9% (248/267)  IGHV4-59*01  206  .......A..............C...............C...G...........................G..T..C...G......---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -CDR3-IMGT--------->                                  
                                      S  G  W  L  A  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3756   271  GTGGGTGGCTGGCTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (8/8)     IGHD6-19*01  11   ----........------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    -------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_152739

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           344     6e-97
IGHD2-15*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTAGCCGCCAAGACACGACT	AGGATATTG	AAGATT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTAGCCGCCAAGACACGACTAGGATATTGAAGATT	ARFSRQDTTRILKI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  D  P  G  K  G  L  
                    Query_3757   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTATATGAGCTGGATCCGTCAGGATCCAGGGAAGGGGCTGG  90
V  94.4% (234/248)  IGHV3-11*01  47   ....................................................C..............C....C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  G  N  S  G  G  A  I  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3757   91   AGTGGGTTTCATACATTGGTAATAGTGGTGGTGCCATATACTACGCAGAGTCTGTGAAAGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  94.4% (234/248)  IGHV3-11*01  137  .................A...G.......A..A................C........G...............................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  M  Y  Y  C  A  R  F  S  R  Q  D  T  T  
                    Query_3757   181  AGAAGTCACTTTATCTCCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATGTATTATTGTGCGAGATTTAGCCGCCAAGACACGACTA  270
V  94.4% (234/248)  IGHV3-11*01  227  ....C.....G.....G.................................G.......C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD2-15*01  1    -----------------------------------------------------------------------------------------.  1

                                      ------------->                                  
                                      R  I  L  K  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3757   271  GGATATTGAAGATTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (9/9)     IGHD2-15*01  2    ........----------------------------------------  9
J  100.0% (34/34)   IGHJ4*02     15   --------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_172038

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           25.7    0.003
IGHJ5*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGGGGCGCGCCC	GTATTACTTTGATAGT	CATAGGCCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCGGGGGCGCGCCCGTATTACTTTGATAGTCATAGGCCTTTCGACTCC	ARAGARPYYFDSHRPFDS	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  R  G  L  E  
                    Query_3758   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAGT  93
V  94.7% (230/243)  IGHV4-59*01  50   .....TCC...A.............................A....................................A...........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  M  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  S  K  N  
                    Query_3758   94   GGATTGGGTATATGTATTACAGTGGTAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCCTATCAGTAGACACGTCCAAGAACC  183
V  94.7% (230/243)  IGHV4-59*01  140  .............C...........G.......................................A........................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      L  F  S  L  K  L  F  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  A  R  P  Y  Y  F  D  
                    Query_3758   184  TGTTCTCCCTGAAGCTGTTCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGCGGGGGCGCGCCCGTATTACTTTGATA  273
V  94.7% (230/243)  IGHV4-59*01  230  A................AG........................................A...---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  93.8% (15/16)    IGHD3-22*01  1    ----------------------------------------------------------------------------........A.....  14

                                      ------------------->                                  
                                      S  H  R  P  F  D  S  W  G  Q  G  A   W  S  P  S  P  Q 
                    Query_3758   274  GTCATAGGCCTTTCGACTCCTGGGGCCAGGGAGCC-TGGTCACCGTCTCCTCAG  326
D  93.8% (15/16)    IGHD3-22*01  15   ..----------------------------------------------------  16
J  93.0% (40/43)    IGHJ5*01     9    -----------.................A...A..C..................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_172039

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         433     1e-123
IGHD1-7*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCGTCC	GTATGACTGGAACTAC	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCGTCCGTATGACTGGAACTACCCCTTTGACTAC	ARHRPYDWNYPFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  E  Y  S  F  T  S  Y
                    Query_3759     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGAATCTCCTGTAAGGGTTCTGAATACAGCTTTACCAGCTA  90
V  97.9% (283/289)  IGHV5-10-1*01  6    ...................................................G...................G..................  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_3759     91   CTGGATCAGCTGGGTGCGTCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  97.9% (283/289)  IGHV5-10-1*01  96   ..................C.......................................................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  T  D  K  S  I  N  T  A  Y  V  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3759     181  GTCCTTCCAAGGCCACGTCACCATCTCAACTGACAAGTCCATCAACACTGCCTACGTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (283/289)  IGHV5-10-1*01  186  ............................G...............G..........C..................................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------CDR3-IMGT--------------->                                  
                                          M  Y  Y  C  A  R  H  R  P  Y  D  W  N  Y  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3759     271  CATGTATTACTGTGCGAGACATCGTCCGTATGACTGGAACTACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  97.9% (283/289)  IGHV5-10-1*01  276  ...................----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                       
D  93.8% (15/16)    IGHD1-7*01     2    ---------------------------....A...........----------------------------------------------  17
J  100.0% (44/44)   IGHJ4*02       5    ---------------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_279036

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         350     8e-99
IGHD2-2*01                                                                                            18.0    0.59 
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GAAAT	GTACCAACTGCT	GTAGGTGCGGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAAATGTACCAACTGCTGTAGGTGCGGGCTGGTTCGACCCC	ARGNVPTAVGAGWFDP	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  V  G  Y  S  W  S  W  I  R  Q  A  P  G  R  G 
                    Query_3760     1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGCAGTGTTGGTTACTCCTGGAGCTGGATCCGGCAGGCACCAGGGAGGGGC  90
V  94.8% (237/250)  IGHV4-30-2*01  49   ..................G...........................G............................C.........A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  M  Y  P  S  G  S  T  Y  N  N  P  S  L  Q  S  R  V  T  I  S  L  D  R  S 
                    Query_3760     91   CTGGAGTGGATTGGGTACATGTATCCTAGTGGGAGCACCTATAACAACCCGTCCCTCCAGAGTCGAGTCACCATATCACTAGACAGGTCC  180
V  94.8% (237/250)  IGHV4-30-2*01  139  ....................C....A...............CT..............A....................G...........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                         K  N  Q  F  S  L  K  M  G  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  N  V  P  T  A  V 
                    Query_3760     181  AAGAACCAGTTCTCCCTGAAGATGGGCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGAGGAAATGTACCAACTGCTGTA  270
V  94.8% (237/250)  IGHV4-30-2*01  229  .....................C..A............................G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD2-2*01     15   ---------------------------------------------------------------------------......G.....---  26

                                        GT------------------>                                  
                                         G  A  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3760     271  GGTGCGGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (47/47)   IGHJ5*02       5    --------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_279037

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           37.2    1e-06 
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAG	TTACTTTGATAGTAGTGGTTAT	GCTCAGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTACTTTGATAGTAGTGGTTATGCTCAGGACGGTATGGACGTC	ARESYFDSSGYAQDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3761   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  S  I  S  S  S  S  N  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3761   91   ACTGGGTCTCATCCATTAGTAGTAGTAGTAATTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  .G............................G...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  R  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  S  Y  F  D  S  S  
                    Query_3761   181  AGAACTCACTGTATCTGCAAATGAACAGGCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAAAGTTACTTTGATAGTAGTG  270
V  98.4% (246/250)  IGHV3-21*01  227  ............................C.........................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.5% (21/22)    IGHD3-22*01  4    -------------------------------------------------------------------------.....A...........  20

                                      IMGT--------------------->                                 
                                      G  Y  A  Q  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3761   271  GTTATGCTCAGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  95.5% (21/22)    IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_279030

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           350     8e-99
IGHD4-17*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACGTAGGG	ACGGTGACTAC	GGGGCGGGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACGTAGGGACGGTGACTACGGGGCGGGGTTTGAGTAC	ARERRDGDYGAGFEY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3762   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTAAGTAGATATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-33*01  47   ........................................C.....C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  N  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  E  S  
                    Query_3762   91   AATGGGTGGCAGTTATCTGGTATGATGGAAATAATAAATACTATGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACGAGTCCA  180
V  94.8% (237/250)  IGHV3-33*01  137  .G..............A.............G.................................A..................A.T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  M  L  H  L  Q  M  N  S  L  G  A  D  D  T  A  V  Y  Y  C  A  R  E  R  R  D  G  D  Y  
                    Query_3762   181  AGAACATGCTGCATCTGCAAATGAACAGCCTGGGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAACGTAGGGACGGTGACTACG  270
V  94.8% (237/250)  IGHV3-33*01  227  ......C....T....................A.......G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD4-17*01  6    ------------------------------------------------------------------------------...........-  16

                                      ---------------->                                  
                                      G  A  G  F  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3762   271  GGGCGGGGTTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.7% (42/43)    IGHJ4*02     6    --------.....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_279031

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD1-26*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCGA	TATACTGGGAGCTAC	CGAC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCGATATACTGGGAGCTACCGACATGCTTTTGATATC	ARFRYTGSYRHAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	233	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3763   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTATTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  95.9% (233/243)  IGHV4-59*01  49   ...........................................G...C.A.......................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       Y  I  G  Y  I  S  Y  S  G  S  T  D  Y  N  P  S  L  K  S  G  V  T  I  S  L  D  T  S  K  N 
                    Query_3763   91   TATATTGGGTATATCTCTTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTGGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  95.9% (233/243)  IGHV4-59*01  139  .GG.............A................A.......................C..............G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  R  Y  T  G  S  Y  R  H 
                    Query_3763   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATTCCGATATACTGGGAGCTACCGACAT  270
V  95.9% (233/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD1-26*01  3    ---------------------------------------------------------------------....G..........------  17
J  97.8% (44/45)    IGHJ3*02     3    ----------------------------------------------------------------------------------------..  4

                                      ----------->                               
                                       A  F  D  I  W  S  Q  G  T  M  V  T  V  S  
                    Query_3763   271  GCTTTTGATATCTGGAGCCAAGGGACAATGGTCACCGTCTCTT  313
J  97.8% (44/45)    IGHJ3*02     5    ...............G...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_172030

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            355     4e-100
IGHD6-19*01                                                                                           18.0    0.65  
IGHJ4*01                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-19*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGGG	AGCAGTGGC	CGCTTCATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGGAGCAGTGGCCGCTTCATCATTGACTAC	ARGGSSGRFIIDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	94	20	0	82.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	259	32	0	89


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  T  F  S  N  Y
                    Query_3764   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTCAGGCTTCTGGATACACCTTCAGCAATTA  90
V  89.0% (259/291)  IGHV1-8*01   6    ............................................................CA.....................C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        E  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  I  N  P  K  G  G  H  T  G  Y  A  Q
                    Query_3764   91   TGAAATCAATTGGGTGCGACAAGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATAAACCCTAAAGGTGGTCACACTGGCTATGCACA  180
V  89.0% (259/291)  IGHV1-8*01   96   ...T.....C...........G...................................G........CA.....A....A...........  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  S  T  I  G  S  N  G  T  A  Y  M  E  L  N  R  L  R  S  E  D  T  A
                    Query_3764   181  GAAATTCCAGGGCAGAGTCACCATGAGCACTATTGGTTCAAACGGCACAGCCTACATGGAACTCAACAGGTTGCGATCTGAGGACACGGC  270
V  89.0% (259/291)  IGHV1-8*01   186  ...G......................C..GG.ACACC..C.TAA................G..G.G...CC..A................  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                 
                                        V  Y  Y  C  A  R  G  G  S  S  G  R  F  I  I  D  Y  W  G  H  G  S  L  V  T  V  S  S 
                    Query_3764   271  CGTCTATTACTGTGCGAGAGGCGGGAGCAGTGGCCGCTTCATCATTGACTACTGGGGCCACGGAAGCCTGGTCACCGTCTCCTCA  355
V  89.0% (259/291)  IGHV1-8*01   276  ...G.................----------------------------------------------------------------  296
                                        V  Y  Y  C  A  R  G                                                                
D  100.0% (9/9)     IGHD6-19*01  7    -------------------------.........---------------------------------------------------  15
J  95.1% (39/41)    IGHJ4*01     7    --------------------------------------------................A....C...................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_172032

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           427     9e-122
IGHD2-21*02                                                                                           14.1    9.3   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGGGGGATG	GGTGGTAACT	CCGGCGTCT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGGGGGATGGGTGGTAACTCCGGCGTCTTAC	ARVGGWVVTPASY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  H  Y 
                    Query_3765   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCCACTAT  91
V  97.2% (281/289)  IGHV1-18*01  7    .................................................A..................................AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  R  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_3765   92   GGTATCAGCTGGGTGCGACGGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAG  181
V  97.2% (281/289)  IGHV1-18*01  97   ...................A......................................................................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3765   182  AACCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGATGACACGGCC  271
V  97.2% (281/289)  IGHV1-18*01  187  ..G.............................................................................C.........  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------CDR3-IMGT-------------->                                  
                                       I  Y  Y  C  A  R  V  G  G  W  V  V  T  P  A  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3765   272  ATCTATTACTGTGCGAGAGTGGGGGGATGGGTGGTAACTCCGGCGTCTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  97.2% (281/289)  IGHV1-18*01  277  G.G................------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                    
D  90.0% (9/10)     IGHD2-21*02  11   -----------------------------......G...----------------------------------------------  20
J  100.0% (37/37)   IGHJ4*02     12   ------------------------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_146302

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           433     1e-123
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_3766   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  97.9% (283/289)  IGHV5-51*01  6    .............................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  P  Y  S  P
                    Query_3766   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCCCATACAGCCC  180
V  97.9% (283/289)  IGHV5-51*01  96   ...............................................................................AG.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3766   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (283/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3766   271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  97.9% (283/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_3766   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_279038

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           308     3e-86
IGHD3-10*01                                                                                           16.1    2.1  
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	TCGGAGA	TCGGGGAG	N/A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCATCGGAGATCGGGGAGGATGCTTTTGATATC	ASEIGEDAFDI	230	262	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	21	3	0	87.5
FR3-IMGT	116	229	114	110	4	0	96.5
CDR3-IMGT (germline)	230	232	3	3	0	0	100
Total	N/A	N/A	219	208	11	0	95


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  V  T  P  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  N  S  D 
                    Query_3767   14   TCTGGAGTCACCCCCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGCATTAACAGTGAT  103
V  95.0% (208/219)  IGHV3-74*01  73   ......T.....TT...............................................................T.....T......  162
                                       S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  N  S  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  S  R  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N 
                    Query_3767   104  GGGAGTAGAATAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTTCAAATGAAC  193
V  95.0% (208/219)  IGHV3-74*01  163  ........C.C..G..................................................................G.........  252
                                       G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><-----------CDR3-IMGT----------->                     
                                       S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  E  I  G  E  D  A  F  D  I  W  G  Q  G  T  M  V 
                    Query_3767   194  AGTCTGAGAGTCGAAGACACGGCTGTGTATTACTGTGCATCGGAGATCGGGGAGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTC  283
V  95.0% (208/219)  IGHV3-74*01  253  ..........C...G........................---------------------------------------------------  291
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                    
D  100.0% (8/8)     IGHD3-10*01  14   ----------------------------------------------........------------------------------------  21
J  98.0% (48/49)    IGHJ3*02     2    ------------------------------------------------------....................................  37

                                                   
                                       T  V  S  S  
                    Query_3767   284  ACCGTCTCATCAG  296
J  98.0% (48/49)    IGHJ3*02     38   ........T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_279039

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           367     6e-104
IGHD2-8*01                                                                                            23.8    0.011 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GGGGC	TATTGTAATGATGGTATGTGCTACACC	CCCGT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGGGGCTATTGTAATGATGGTATGTGCTACACCCCCGTCTACTACTACTCCGGTATGGACGTC	AKGGYCNDGMCYTPVYYYSGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  P  
                    Query_3768   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTACTGGATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  97.2% (242/249)  IGHV3-74*01  47   .............................................G........................A................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3768   91   TGTGGGTCTCACGTATCAATAGTGATGGGAGTAGCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (242/249)  IGHV3-74*01  137  ................T......................G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  G  Y  C  N  D  G  
                    Query_3768   181  AGAACACCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAAAGGGGGCTATTGTAATGATGGTA  270
V  97.2% (242/249)  IGHV3-74*01  227  .......G..........................................................G..---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  81.5% (22/27)    IGHD2-8*01   5    --------------------------------------------------------------------------.......C.A.....G  20

                                      --CDR3-IMGT----------------------------->                                 
                                      M  C  Y  T  P  V  Y  Y  Y  S  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_3768   271  TGTGCTACACCCCCGTCTACTACTACTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  344
D  81.5% (22/27)    IGHD2-8*01   21   .A.....T...---------------------------------------------------------------  31
J  96.6% (56/58)    IGHJ6*02     5    ----------------...........A...................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_146306

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           344     6e-97
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	C	TATAGCAGTGGCTGG	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGACTATAGCAGTGGCTGGTACTTTGACTAC	ARDYSSGWYFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3769   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTACTTTCAGTAGCTACTGGATACACTGGGTCCGCCAAGCTCCAGGAAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-74*01  47   ..................................C..C.................G.......................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  I  T  R  D  E  I  G  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3769   91   AGTGGGTCTCACGTATTACTAGAGATGAGATTGGCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-74*01  137  T.................A...T....G..G.A......G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  S  S  G  W  Y  
                    Query_3769   181  AGAATACGGTGTATCTGCAAATGAACAGTCTCAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGGGACTATAGCAGTGGCTGGTACT  270
V  94.0% (235/250)  IGHV3-74*01  227  ....C...C......................G...................................A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD6-19*01  4    -----------------------------------------------------------------------...............----  18
J  97.8% (45/46)    IGHJ4*02     3    --------------------------------------------------------------------------------------....  6

                                      ------->                                  
                                      F  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3769   271  TTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.8% (45/46)    IGHJ4*02     7    ...............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_24309

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           258     4e-71
IGHD2-15*01                                                                                           10.3    119  
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	ACATAATCCT	GCTGC	CAGAGGGGC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGACATAATCCTGCTGCCAGAGGGGCCAACTGGTTCGACCTC	ARGHNPAARGANWFDL	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	48	24	18	3	3	75
FR2-IMGT	49	99	51	45	6	0	88.2
CDR2-IMGT	100	120	21	18	3	0	85.7
FR3-IMGT	121	234	114	95	19	0	83.3
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	245	207	35	3	84.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  D  F  Y  G  G  P  F     D  S  Y  W  N  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_3770   1    ACCCTGTCCCTCACCTGCGATTTTTATGGTGGGCCCTT---TGATTCCTACTGGAATTGGATCCGCCAGACTCCAGGGAAGGGGCTGGAG  87
V  84.5% (207/245)  IGHV4-34*01  49   ...................C.G.C.........T....CAG..G..A........GC............C.C..................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  N  R  A  G  S  T  N  F  N  P  S  L  E  S  R  L  T  I  S  V  D  T  S  T  K 
                    Query_3770   88   TGGATTGCAGAAATCAATCGTGCTGGAAGCACCAACTTCAATCCGTCCCTCGAGAGTCGACTCACCATTTCAGTGGACACGTCCACGAAG  177
V  84.5% (207/245)  IGHV4-34*01  139  .......GG..........A.AG..............A...C.........A........G.......A.....A..........A...C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       R  F  S  L  R  L  N  S  L  N  A  A  D  T  G  V  Y  Y  C  A  R  G  H  N  P  A  A  R  G  A 
                    Query_3770   178  CGATTCTCCCTGAGGCTAAATTCTCTTAACGCCGCAGACACGGGTGTGTATTACTGTGCGCGAGGACATAATCCTGCTGCCAGAGGGGCC  267
V  84.5% (207/245)  IGHV4-34*01  229  .AG..........A...G.GC...G.G.C......G.......C................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (5/5)     IGHD2-15*01  21   ---------------------------------------------------------------------------.....----------  25
J  96.0% (48/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  D  L  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_3770   268  AACTGGTTCGACCTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  316
J  96.0% (48/50)    IGHJ5*02     3    .............C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_24308

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD3-9*01                                                                                            23.8    0.011
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTT	CGATTTTTTGACTGG	CCTAAATCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTCGATTTTTTGACTGGCCTAAATCATTTTGACTAC	ARDFDFLTGLNHFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  A  M  T  W  V  R  Q  A  S  G  R  G  L  
                    Query_3771   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGCCATGACCTGGGTCCGCCAGGCTTCAGGGAGGGGGCTGG  90
V  92.0% (230/250)  IGHV3-23*01  47   ...............................................T.........G................C......A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  N  P  S  G  G  T  T  R  Y  S  D  S  V  K  G  R  F  T  I  S  K  D  N  S  
                    Query_3771   91   AGTGGGTCTCAACTATTAATCCTAGTGGTGGGACCACACGCTACTCGGACTCCGTGAAGGGCCGCTTCACCATCTCCAAAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-23*01  137  ...........G......G.GG.........T.G....TA....G.A.................G.............G...........  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  V  Y  L  Q  M  T  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  D  F  L  T  G  
                    Query_3771   181  AGAACACGGTGTATCTGCAGATGACCAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAGAGATTTCGATTTTTTGACTGGCC  270
V  92.0% (230/250)  IGHV3-23*01  227  ........C..........A....A.........................................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (14/15)    IGHD3-9*01   7    -------------------------------------------------------------------------....A..........--  21

                                      ---------------->                                  
                                      L  N  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3771   271  TAAATCATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (43/43)   IGHJ4*02     6    --------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_24307

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*04                                                                                           296     2e-82
IGHD2-21*01                                                                                           10.3    124  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*04	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATAAAGACCCCGGAGGGCGC	CTATT	TCTCG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATAAAGACCCCGGAGGGCGCCTATTTCTCGTACTACGGTATGGACGTC	ARIKTPEGAYFSYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	218	29	0	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  I  A  S  G  F  T  F  S  D  F  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3772   1    GGTCCCTGAGACTCTCCTGTATAGCCTCTGGATTCACCTTCAGTGATTTTACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGC  90
V  88.3% (218/247)  IGHV3-21*04  47   ....................GC......................AGC.A..G.................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  S  S  G  T  Y  T  Y  Y  A  D  S  L  Q  G  R  F  T  I  A  R  D  N  A  
                    Query_3772   91   AGTGGGTGTCATCCATTAGTAGTAGTGGGACTTACACATACTACGCAGACTCACTTCAGGGCCGATTCACCATCGCCAGAGACAACGCCA  180
V  88.3% (218/247)  IGHV3-21*04  137  .......C..................A.T.G.....T................G.GA.................T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  R  S  L  Y  L  Q  V  N  S  L  R  T  E  D  T  G  I  Y  Y  C  A  R  I  K  T  P  E  G  A  
                    Query_3772   181  AGAGGTCTCTGTATCTCCAAGTGAACAGCCTGAGAACCGAGGACACCGGCATATATTATTGTGCGAGGATAAAGACCCCGGAGGGCGCCT  270
V  88.3% (218/247)  IGHV3-21*04  227  ...AC..A........G...A..............G..........G.C.G.G.....C........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  22   ----------------------------------------------------------------------------------------..  23

                                      IMGT--------------------->                              
                                      Y  F  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_3772   271  ATTTCTCGTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  326
D  100.0% (5/5)     IGHD2-21*01  24   ...-----------------------------------------------------  26
J  100.0% (48/48)   IGHJ6*02     12   --------................................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_24306

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           327     1e-91
IGHD4-17*01                                                                                           16.1    2.6  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACTATGGGGGGTTTTCATAACGC	CGGTGACT	TCCAGTTTCAGAGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACTATGGGGGGTTTTCATAACGCCGGTGACTTCCAGTTTCAGAGTTTTGACTCC	ARTMGGFHNAGDFQFQSFDS	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	93	21	0	81.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	249	40	0	86.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  I  S  C  K  T  S  G  D  S  F  N  T  R
                    Query_3773   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGATCTCCTGCAAAACTTCTGGAGACAGCTTCAACACCCG  90
V  86.2% (249/289)  IGHV1-69*06  6    ....................................................G..........GG.........G..C.....G..G.TA  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  L  S  W  V  R  Q  A  P  G  R  G  L  E  W  L  G  G  L  I  P  I  F  N  T  P  K  Y  S  Q
                    Query_3773   91   TGGTCTCAGCTGGGTGCGACAGGCCCCTGGACGGGGACTTGAGTGGCTGGGAGGGCTCATCCCTATCTTTAATACACCAAAGTACTCACA  180
V  86.2% (249/289)  IGHV1-69*06  96   ..C.A...........................AA..G.........A........A..............GG....G....C...G....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  N  V  L  F  M  N  L  T  S  L  R  S  E  D  T  A
                    Query_3773   181  GAAGTTCCAGGGCAGAGTCACTATCACCGCGGACAAATCCACGAATGTTCTCTTCATGAACCTTACCAGCCTGAGGTCTGAGGACACTGC  270
V  86.2% (249/289)  IGHV1-69*06  186  .....................G..T...................GCACAGC..A....G.G..G.G.........A...........G..  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        L  Y  Y  C  A  R  T  M  G  G  F  H  N  A  G  D  F  Q  F  Q  S  F  D  S  W  G  Q  G  T  L
                    Query_3773   271  CCTCTATTATTGTGCGAGAACTATGGGGGGTTTTCATAACGCCGGTGACTTCCAGTTTCAGAGTTTTGACTCCTGGGGCCAGGGAACCCT  360
V  86.2% (249/289)  IGHV1-69*06  276  .G.G.....C.........-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD4-17*01  7    ------------------------------------------........----------------------------------------  14
J  97.7% (42/43)    IGHJ4*02     6    ----------------------------------------------------------------.......A..................  31

                                                       
                                        V  T  V  S  S  
                    Query_3773   361  GGTCACCGTCTCCTCAG  377
J  97.7% (42/43)    IGHJ4*02     32   .................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_24304

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            325     3e-91
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCCACCCGAAAA	TATGACAGTAGTGATTATT	CCTCCCCCCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCACCCGAAAATATGACAGTAGTGATTATTCCTCCCCCCTCTTTGACTAC	STRKYDSSDYSSPLFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	26	1	0	96.3
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	18	3	0	85.7
FR3-IMGT	129	242	114	108	6	0	94.7
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  G  S  I  S  S  T  N  W  W  N  W  V  R  Q  P  P  G  K  G  
                    Query_3774   1    GGTCCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATCAGCAGTACTAACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  93.0% (225/242)  IGHV4-4*02   47   ..A.....TCC...A....C............................G...........G.............................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  R  G  G  S  P  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  
                    Query_3774   91   TGGAGTGGATTGGGGAAATCTATCGTGGTGGGAGCCCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCACTAGACAAGTCCA  180
V  93.0% (225/242)  IGHV4-4*02   137  ........................A.A........A.....................................A...G............  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  S  T  R  K  Y  D  S  S  D  
                    Query_3774   181  AAAACCAGTTCTCCCTGCGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTTCCACCCGAAAATATGACAGTAGTGATT  270
V  93.0% (225/242)  IGHV4-4*02   227  .G...............AA.....G.....................................----------------------------  288
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                             
D  89.5% (17/19)    IGHD3-22*01  8    --------------------------------------------------------------------------.....T.......G..  23

                                      GT-------------------->                                  
                                      Y  S  S  P  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3774   271  ATTCCTCCCCCCTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  89.5% (17/19)    IGHD3-22*01  24   ...------------------------------------------------------  26
J  100.0% (44/44)   IGHJ4*02     5    -------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_24302

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-10*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTTTGTGGTACTCG	GGTTCGGGGAGT	AATCCCCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTTGTGGTACTCGGGTTCGGGGAGTAATCCCCGTTTTGACTAC	ARALWYSGSGSNPRFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_3775   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGTGGGGGTTACTACTGGATCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.2% (243/250)  IGHV4-31*03  49   ...............................G...............T.............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  T  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3775   91   CTGGAGTGGATTGGATACATCTATTACAGTGGGAGCACCTACTACACCCCGTCCCTCAAGAGTCGAGTTACCATTTCAGTCGACACGTCT  180
V  97.2% (243/250)  IGHV4-31*03  139  ..............G...............................A...........................A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  L  W  Y  S  G  S 
                    Query_3775   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTTTGTGGTACTCGGGTTCG  270
V  97.2% (243/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD3-10*01  11   ------------------------------------------------------------------------------------......  16

                                      MGT-------------------->                                  
                                       G  S  N  P  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3775   271  GGGAGTAATCCCCGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  100.0% (12/12)   IGHD3-10*01  17   ......----------------------------------------------------  22
J  100.0% (43/43)   IGHJ4*02     6    ---------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_24301

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATTTGCTGA	TTCGGGGA	TTGAAAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGTC	AKFADSGIETYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	276	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  S  F
                    Query_3776   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTATCAGCTT  90
V  96.2% (276/287)  IGHV5-51*01  6    ...................................................................................C.....A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  C  L  G  I  I  D  P  R  D  S  D  T  T  Y  S  P
                    Query_3776   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGCTTGGGGATCATCGATCCTCGTGACTCTGATACCACATACAGCCC  180
V  96.2% (276/287)  IGHV5-51*01  96   ........G....................................GA...........T.....G...............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  T  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3776   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (276/287)  IGHV5-51*01  186  .............................C...........T................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  K  F  A  D  S  G  I  E  T  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_3776   271  CATGTATTATTGTGCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTC  360
V  96.2% (276/287)  IGHV5-51*01  276  .........C.......-------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                           
D  100.0% (8/8)     IGHD3-10*01  13   ---------------------------........-------------------------------------------------------  20
J  98.0% (48/49)    IGHJ6*02     14   ------------------------------------------.............................................C..  61

                                       
                                       
                    Query_3776   361  A  361
J  98.0% (48/49)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_24300

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_3777   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG..G.T..................................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_3777   91   TGGATTGGATATATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  93.4% (228/244)  IGHV4-59*01  139  ........G...................G.....A............................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W 
                    Query_3777   181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------------------------------------------....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_3777   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (35/35)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_68145

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           294     6e-82
IGHD6-25*01                                                                                           18.0    0.58 
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-25*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	CAGCGGCTA	AAACTACTCGATACAGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGATCAGCGGCTAAAACTACTCGATACAGTTGGTTCGACCCA	SRSAAKTTRYSWFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  G  S  G  F  S  F  I  S  Y  S  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3778   1    GGTCCCTGAGACTCTCCTGTTCAGGCTCTGGATTCTCTTTTATTTCGTATAGCATCAACTGGGTCCGCCAGGCTCCCGGGAAGGGGCTGG  90
V  87.9% (218/248)  IGHV3-21*01  47   ....................G...C..........A.C..C.G.AGC........G....................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  A  S  G  D  Y  I  Y  Y  I  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_3778   91   AGTGGGTCTCATCTGTCAGTGCTAGCGGTGACTACATATACTACATAGACTCAGTGAGGGGCCGATTCACCATCTCTAGAGACAACGCCA  180
V  87.9% (218/248)  IGHV3-21*01  137  .............CA.T...AG...TA..AGT............GC...........A..................C.............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  K  S  V  Y  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  S  R  S  A  A  K  T  T  R  
                    Query_3778   181  AGAAGTCAGTGTATCTGCAGATGAACGGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTTCGAGATCAGCGGCTAAAACTACTCGAT  270
V  87.9% (218/248)  IGHV3-21*01  227  ....C...C..........A......A...................................G.....----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-25*01  9    ---------------------------------------------------------------------.........------------  17

                                      ---------------->                                  
                                      Y  S  W  F  D  P  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_3778   271  ACAGTTGGTTCGACCCATGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  321
J  95.7% (44/46)    IGHJ5*02     6    -----...........C.....................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_162035

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           353     1e-99
IGHD3-22*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCAC	ARAPPFDYDLDVRGIHNFDH	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	235	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3779   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (235/244)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  C  I  Y  Y  G  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_3779   91   TGGATTGGGTGTATCTATTACGGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAGC  180
V  96.3% (235/244)  IGHV4-59*01  139  ..........A..........A......G.............................................A.............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D 
                    Query_3779   181  CAGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGAC  270
V  96.3% (235/244)  IGHV4-59*01  229  ..................AG...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-22*01  6    ----------------------------------------------------------------------------........------  13

                                      GT------------------------>                                  
                                       V  R  G  I  H  N  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3779   271  GTAAGGGGAATCCACAACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  97.8% (44/45)    IGHJ4*02     4    ----------------........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_216674

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           422     2e-120
IGHD3-22*01                                                                                           19.9    0.18  
IGHJ3*01                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATA	CTACAGGTCG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACAGGTCGTGATCCTTTTGATTTC	ARVSREYYDTTGRDPFDF	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F
                    Query_3780   1    GCAGCTGGTGCAGTCTGGAGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTT  90
V  96.6% (280/290)  IGHV3-33*01  6    ..........G.......G..................................................................AG..A  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D
                    Query_3780   91   TGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATTTGGTATGATGGAAGTAATAAATACTATGCAGA  180
V  96.6% (280/290)  IGHV3-33*01  96   .........................................................A................................  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A
                    Query_3780   181  CTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGC  270
V  96.6% (280/290)  IGHV3-33*01  186  .....................................T...........C.......................A................  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  T  T  G  R  D  P  F  D  F  W  G  Q  G  T  I  L  T
                    Query_3780   271  TGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATACTACAGGTCGTGATCCTTTTGATTTCTGGGGCCAAGGGACAATACTCAC  360
V  96.6% (280/290)  IGHV3-33*01  276  ...G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD3-22*01  5    -------------------------------..........-------------------------------------------------  14
J  92.0% (46/50)    IGHJ3*01     1    ---------------------------------------------------....G........G...................GG....  39

                                                 
                                        V  S  S  
                    Query_3780   361  CGTCTCTTCAG  371
J  92.0% (46/50)    IGHJ3*01     40   ...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_216677

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD3-10*01                                                                                           46.8    1e-09 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAC	TATTACTATGGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTATTACTATGGTTCGGGGAGTTATTTTGAATAC	ARGHYYYGSGSYFEY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_3781   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ...............................G.............................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  F  T  I  S  V  D  T  S 
                    Query_3781   91   CTGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGATTTACCATATCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ...............T..................................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  Y  Y  Y  G  S 
                    Query_3781   181  AAGAACCAGTTCTCCCTGAAGGTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTATTACTATGGTTCG  270
V  97.6% (244/250)  IGHV4-31*03  229  .....................C....C...........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (24/24)   IGHD3-10*01  2    ---------------------------------------------------------------------------...............  16

                                      ----------------->                                  
                                       G  S  Y  F  E  Y  W  G  Q  G  T  L  V  T  A  S  S  
                    Query_3781   271  GGGAGTTATTTTGAATACTGGGGCCAGGGAACCCTGGTCACCGCCTCCTCAG  322
D  100.0% (24/24)   IGHD3-10*01  17   .........-------------------------------------------  25
J  95.3% (41/43)    IGHJ4*02     6    ---------.....C............................T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_199852

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-10*01                                                                                           10.3    119  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACA	GGGGA	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACAGGGGATACTACGGTATGGACGTC	ARDDRGYYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_3782   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTATTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   .....................................................C.A.....G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  H  Y  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S 
                    Query_3782   91   CTGGAGTGGATTGGGAACATCCATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ...............T.....T...................C.................G........T.....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  E  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  D  D  R  G  Y  Y  G 
                    Query_3782   181  AAGAACCAGTTCTCCCTGGAGCTGACCTCTATGACAGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGATGACAGGGGATACTACGGT  270
V  94.4% (237/251)  IGHV4-31*03  229  ..................A......G....G....T.................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------------.....---------  20
J  96.0% (48/50)    IGHJ6*02     12   ---------------------------------------------------------------------------------.........  20

                                      -------->                                
                                       M  D  V  W  G  Q  G  I  T  V  T  V  S  S
                    Query_3782   271  ATGGACGTCTGGGGCCAAGGGATTACGGTCACCGTCTCCTC  311
J  96.0% (48/50)    IGHJ6*02     21   ......................CC.................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_199855

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD2-8*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TAATGGTGT	GGCAGTGGCTAGAAGATTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAATGGTGTGGCAGTGGCTAGAAGATTTTTTGACTCC	ARDNGVAVARRFFDS	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  I  S  G  G  S  F  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  E  G  L  E 
                    Query_3783   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGGCTCCTTCAGTTCTTATTACTGGAGCTGGATTCGGCAGTCCCCAGGGGAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   .....................G..............A.....AG...C..............C......C........A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3783   91   TGGATTGGCTATGTCTACTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G...A....T..C.....................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  N  G  V  A  V  A  R  R 
                    Query_3783   181  CAGTTCTCCCTGAGGCTGACGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATAATGGTGTGGCAGTGGCTAGAAGA  270
V  93.5% (229/245)  IGHV4-59*01  229  .............A.....GC..........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD2-8*01   13   -----------------------------------------------------------------.........----------------  21

                                      ----------->                                  
                                       F  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_3783   271  TTTTTTGACTCCTGGGGCCAGGGAATCCTGGTCACCGTTTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.......A..............C............C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_199854

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           311     4e-87
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TCCGTGCA	TATTACTTTGATAGGAGT	CCCCGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCCGTGCATATTACTTTGATAGGAGTCCCCGGGACTAC	VRAYYFDRSPRDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  S  S  D  F  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3784   1    GGTCCCTGAGACTCTCCTGCTCAGCCTCTGGATTCACCTCCAGTGACTTTAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.9% (221/243)  IGHV3-21*01  47   ...................TG..................T....AG..A....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  S  S  G  T  Y  I  Y  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  A  
                    Query_3784   91   AGTGGGTCTCATCCATAACTAGTAGTGGTACTTACATATACTACGCAGACTCAGTGACGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  90.9% (221/243)  IGHV3-21*01  137  ................T.G.......A...G..........................A......A.........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      R  N  S  M  S  L  Q  M  N  S  L  T  V  D  D  T  A  I  Y  Y  C  V  R  A  Y  Y  F  D  R  S  
                    Query_3784   181  GGAACTCTATGTCTCTGCAAATGAACAGCCTGACAGTCGACGACACGGCTATCTATTACTGTGTCCGTGCATATTACTTTGATAGGAGTC  270
V  90.9% (221/243)  IGHV3-21*01  227  A......AC...A....................G..C...G.........G.G..........---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  88.9% (16/18)    IGHD3-22*01  2    -----------------------------------------------------------------------.......A......T...-  19

                                      ---------->                                  
                                      P  R  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3784   271  CCCGGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (40/40)   IGHJ4*02     9    -----........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_199857

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GTCCTGGGTACTCT	GGAGTT	GC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCCTGGGTACTCTGGAGTTGCCTTTGACCAC	ARRPGYSGVAFDH	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  D  F  I  S  T  Y  Y  W  N  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_3785   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGACTTCATCAGTACTTATTATTGGAATTGGATCCGGCAGGCCCCAGGGAAGGGACTGGAG  90
V  92.2% (225/244)  IGHV4-59*08  49   ...................C...........G..C........G...C..C....GC............C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  D  T  N  P  S  L  K  S  R  V  T  M  T  V  D  T  S  K  N 
                    Query_3785   91   TGGATTGGGTATATCTACTACAGTGGGAGCACCGACACCAACCCCTCCCTCAAGAGTCGAGTCACCATGACAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .................T...............A..TA..............................AT....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  P  G  Y  S  G  V  A  F 
                    Query_3785   181  CAATTCTCCCTGAAGTTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACGTCCTGGGTACTCTGGAGTTGCCTTT  270
V  92.2% (225/244)  IGHV4-59*08  229  ..G............C....C..........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-10*01  18   ------------------------------------------------------------------------------......------  23
J  93.2% (41/44)    IGHJ4*02     5    --------------------------------------------------------------------------------------....  8

                                      ----->                                  
                                       D  H  W  G  Q  G  K  L  V  T  V  S  S  
                    Query_3785   271  GACCACTGGGGCCAGGGAAAACTGGTCACCGTCTCCTCAG  310
J  93.2% (41/44)    IGHJ4*02     9    ...T...............CC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_216672

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           403     1e-114
IGHD2-15*01                                                                                           21.8    0.047 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGTTTTTC	GGATATTGTAG	GGATGGAAATTGTTACGCACTGGAGTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGTTTTTCGGATATTGTAGGGATGGAAATTGTTACGCACTGGAGTAT	ARDRFFGYCRDGNCYALEY	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  T  F  T  S  Y 
                    Query_3786   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACCTCTGGTTACACCTTTACCAGTTAC  91
V  94.5% (274/290)  IGHV1-18*04  7    ............................A..................................G.T....................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  L  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  T  Y  N  G  N  T  N  Y  A  Q 
                    Query_3786   92   GGTCTCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCGGCACTTACAATGGGAACACAAACTATGCACAG  181
V  94.5% (274/290)  IGHV1-18*04  97   ...A...G.................................................A..G..........T..................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  L  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3786   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGATACATCCACGAGAACAGCGTACTTGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.5% (274/290)  IGHV1-18*04  187  ...C............................C...........C.....C...A...................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       L  Y  Y  C  A  R  D  R  F  F  G  Y  C  R  D  G  N  C  Y  A  L  E  Y  W  G  Q  G  T  L  V 
                    Query_3786   272  CTATATTACTGTGCGAGAGATAGGTTTTTCGGATATTGTAGGGATGGAAATTGTTACGCACTGGAGTATTGGGGCCAGGGAACCCTGGTC  361
V  94.5% (274/290)  IGHV1-18*04  277  G.G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (11/11)   IGHD2-15*01  2    ------------------------------...........-------------------------------------------------  12
J  100.0% (34/34)   IGHJ4*02     15   ---------------------------------------------------------------------.....................  35

                                                   
                                       T  V  S  S  
                    Query_3786   362  ACCGTCTCCTCAG  374
J  100.0% (34/34)   IGHJ4*02     36   .............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_199859

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           419     2e-119
IGHD6-19*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CCGCGGA	GGGTATAGCAGTGGCTGGTAC	GGTCCGTCCCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACCGCGGAGGGTATAGCAGTGGCTGGTACGGTCCGTCCCTCTTTGACTAC	ARHRGGYSSGWYGPSLFDY	267	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	29	1	0	96.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	152	21	21	0	0	100
FR3-IMGT	153	266	114	113	1	0	99.1
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	271	3	0	98.9


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  S  S  Y  Y  W  G  W  
                    Query_3787   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTAGTAGTTACTACTGGGGCTGGA  90
V  98.9% (271/274)  IGHV4-39*01  26   ................T..........................................A..............................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  
                    Query_3787   91   TCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAG  180
V  98.9% (271/274)  IGHV4-39*01  116  ..........................................................................................  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  
                    Query_3787   181  TCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGA  270
V  98.9% (271/274)  IGHV4-39*01  206  ............................................................................G.............  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      --------------------CDR3-IMGT----------------------->                                  
                                      R  H  R  G  G  Y  S  S  G  W  Y  G  P  S  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3787   271  GACACCGCGGAGGGTATAGCAGTGGCTGGTACGGTCCGTCCCTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  357
V  98.9% (271/274)  IGHV4-39*01  296  ....-----------------------------------------------------------------------------------  299
                                      R                                                                                      
D  100.0% (21/21)   IGHD6-19*01  1    -----------.....................-------------------------------------------------------  21
J  100.0% (44/44)   IGHJ4*02     5    -------------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_199858

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           363     1e-102
IGHD6-19*01                                                                                           21.8    0.040 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCAGG	GCAGTGGCTGG	CACG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTC	ARVPGQWLARGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3788   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (239/246)  IGHV3-53*01  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  M  Y  S  G  G  T  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_3788   91   AGTGGGTCTCAGTTATGTATAGCGGTGGGACCACATACTACGCAGAGTCCGTGAAGGGCCGATTCACCATCTCAAGAGACAATTCCAAGA  180
V  97.2% (239/246)  IGHV3-53*01  137  ................T...........T.G...............C..........................C................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  G  Q  W  L  A  R  
                    Query_3788   181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGTCCCAGGGCAGTGGCTGGCACGCG  270
V  97.2% (239/246)  IGHV3-53*01  227  ..................................................................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD6-19*01  8    -------------------------------------------------------------------------...........------  18
J  100.0% (46/46)   IGHJ6*02     17   ----------------------------------------------------------------------------------------..  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3788   271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (46/46)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_216679

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           367     6e-104
IGHD3-10*01                                                                                           14.1    9.4   
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGCC	ACTATGG	GGATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATC	ARSHYGDAYWYLDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	261	26	0	90.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T  S  Y 
                    Query_3789   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATCTTCACCAGTTAT  91
V  90.9% (261/287)  IGHV1-18*01  7    .................................................................T..........C...T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  F  E  W  M  G  W  I  S  P  Y  N  G  N  T  A  Y  A  E 
                    Query_3789   92   GGAATCACTTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAGCCTACGCAGAG  181
V  90.9% (261/287)  IGHV1-18*01  97   ..T....GC...........................C.......................G.................AA...T...C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  F  T  V  A  T  E  T  S  T  N  T  A  F  M  E  L  R  S  L  K  A  D  D  T  A 
                    Query_3789   182  AAGTTCCAGGGCAGATTCACCGTGGCCACAGAGACTTCCACGAACACAGCCTTCATGGAGCTGCGGAGTCTGAAAGCTGACGACACGGCC  271
V  90.9% (261/287)  IGHV1-18*01  187  ...C...........G.....A..A.......C..A.......G........A..........A....C....G.T..............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  S  H  Y  G  D  A  Y  W  Y  L  D  I  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3789   272  GTCTATTACTGTGCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  359
V  90.9% (261/287)  IGHV1-18*01  277  ..G..............-----------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                          
D  100.0% (7/7)     IGHD3-10*01  6    ----------------------.......-----------------------------------------------------------  12
J  96.2% (51/53)    IGHJ2*01     1    -----------------------------------..........T.....C....................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_162038

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_3790   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_3790   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_3790   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_3790   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_255731

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           358     4e-101
IGHD3-16*01                                                                                           12.2    35    
IGHJ6*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCC	TTGGGG	CGGC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCTTGGGGCGGCCTACGGTTTGGACGTC	ARPLGAAYGLDV	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	259	30	0	89.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  D  S  L  T  I  S  C  Q  V  S  G  Y  I  F  T  H  Y
                    Query_3791   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCGGGGGACTCTCTGACGATCTCCTGTCAGGTTTCAGGATACATCTTCACCCACTA  90
V  89.6% (259/289)  IGHV5-51*03  6    ...............................A..........G.......A..........A...G...T.......G...T...AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  A  R  Q  V  A  G  K  G  L  E  W  M  G  V  I  Y  P  D  D  S  D  A  R  Y  S  P
                    Query_3791   91   TTGGATCGCCTGGGCGCGCCAGGTGGCCGGCAAAGGCCTAGAGTGGATGGGGGTCATCTATCCTGACGACTCTGATGCCAGATACAGCCC  180
V  89.6% (259/289)  IGHV5-51*03  96   C.......G.....T.......A..C....G........G............A............GT.........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  L  V  T  I  S  V  D  K  S  L  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3791   181  GTCCTTTCAAGGCCTGGTCACCATCTCAGTCGACAAGTCCCTCAGTACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  89.6% (259/289)  IGHV5-51*03  186  ......C.......A..............C..........A....C....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                     
                                        I  Y  F  C  A  R  P  L  G  A  A  Y  G  L  D  V  W  G  Q  G  T  A  V 
                    Query_3791   271  CATTTACTTCTGTGCGAGACCCCTTGGGGCGGCCTACGGTTTGGACGTCTGGGGCCAAGGGACCGCGGTC  340
V  89.6% (259/289)  IGHV5-51*03  276  ...G..T.A..........---------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                    
D  100.0% (6/6)     IGHD3-16*01  16   -----------------------......-----------------------------------------  21
J  94.6% (35/37)    IGHJ6*02     14   ---------------------------------.......A.......................A.....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_150394

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           383     1e-108
IGHD2-15*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GGGAGGCTCG	TTGTAGTGGTGGTAGCTGCTAC	GGAGTTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGGGGAGGCTCGTTGTAGTGGTGGTAGCTGCTACGGAGTTTATGACTAC	TTGEARCSGGSCYGVYDY	249	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	30	0	0	100
FR3-IMGT	135	248	114	110	4	0	96.5
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	250	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3792   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (250/255)  IGHV3-15*01  47   .......T..................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  N  Y  A  A  P  V  K  G  R  F  S  I  S  R  D  
                    Query_3792   91   AGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAAACTACGCTGCACCCGTGAAAGGCAGATTCAGCATCTCAAGAGATG  180
V  98.0% (250/255)  IGHV3-15*01  137  ............................................G..............................C..............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  G  E  A  R  C  
                    Query_3792   181  ATTCAAAGAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTTTATTACTGTACCACAGGGGAGGCTCGTTGTA  270
V  98.0% (250/255)  IGHV3-15*01  227  .......A..................................................G................---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (22/22)   IGHD2-15*01  7    -------------------------------------------------------------------------------------.....  11

                                      -CDR3-IMGT--------------------->                                 
                                      S  G  G  S  C  Y  G  V  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_3792   271  GTGGTGGTAGCTGCTACGGAGTTTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  335
D  100.0% (22/22)   IGHD2-15*01  12   .................------------------------------------------------  28
J  100.0% (40/40)   IGHJ4*02     8    -------------------------........................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_150397

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           383     1e-108
IGHD3-10*01                                                                                           44.9    5e-09 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTT	GTATTACTTTGGTTCGGGGAGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTGTATTACTTTGGTTCGGGGAGTTATTCGGACTAC	ARSLYYFGSGSYSDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	247	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  N  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3793   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTAACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  99.2% (247/249)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3793   91   CTGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  99.2% (247/249)  IGHV4-31*03  139  ...............T..........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  F  G  S 
                    Query_3793   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGATCCTTGTATTACTTTGGTTCG  270
V  99.2% (247/249)  IGHV4-31*03  229  .....................................................................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  96.2% (25/26)    IGHD3-10*01  1    --------------------------------------------------------------------------........A.......  16

                                      ----------------->                                  
                                       G  S  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3793   271  GGGAGTTATTCGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  96.2% (25/26)    IGHD3-10*01  17   ..........------------------------------------------  26
J  100.0% (40/40)   IGHJ4*02     9    ------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_150396

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*02                                                                                            364     5e-103
IGHD2-21*02                                                                                           14.1    9.3   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*02	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCACTTTG	GGTGGGGACT	CTCTCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCACTTTGGGTGGGGACTCTCTCCCTTTGACTAT	ARDHFGWGLSPFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	94	20	0	82.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	262	29	0	90


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T  D  H
                    Query_3794   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCACCGACCA  90
V  90.0% (262/291)  IGHV1-2*02   6    .............................................................................C........G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  H  W  V  R  Q  A  P  G  H  G  P  E  W  M  G  W  I  N  P  K  T  G  G  I  S  Y  A  Q
                    Query_3794   91   CTATATCCACTGGGTGCGACAGGCCCCTGGACATGGGCCTGAGTGGATGGGATGGATCAACCCTAAGACTGGTGGCATAAGTTATGCACA  180
V  90.0% (262/291)  IGHV1-2*02   96   ......G..........................A....T...........................C.G........C..AC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  D  G  R  V  T  I  T  R  D  T  S  I  T  T  V  Y  M  E  L  S  R  L  T  S  G  D  T  A
                    Query_3794   181  GAGATTTGACGGCCGGGTCACGATAACCAGGGACACGTCCATTACTACAGTCTACATGGAGTTGTCGAGGCTGACATCTGGCGACACGGC  270
V  90.0% (262/291)  IGHV1-2*02   186  ..AG...C.G...A.......C..G.................C.GC....C..........C..AGC.......G.....A.........  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  D  H  F  G  W  G  L  S  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3794   271  CGTATATTACTGTGCGAGAGATCACTTTGGGTGGGGACTCTCTCCCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  90.0% (262/291)  IGHV1-2*02   276  ...G.................--------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                       
D  90.0% (9/10)     IGHD2-21*02  11   -----------------------------.....T....--------------------------------------------------  20
J  97.7% (43/44)    IGHJ4*02     5    ---------------------------------------------.........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_34364

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_3795   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_3795   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  R  K  A  S  D  T  A
                    Query_3795   181  GTCCTTCGAGGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCGGAAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .......C.A...................................C...........G......A......T..................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_3795   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_3795   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_34365

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           255     3e-70
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAAG	AGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQEWLPGDWYFDL	215	271	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR2-IMGT	34	79	46	41	5	0	89.1
CDR2-IMGT	80	100	21	18	3	0	85.7
FR3-IMGT	101	214	114	110	4	0	96.5
CDR3-IMGT (germline)	215	220	6	6	0	0	100
Total	N/A	N/A	187	175	12	0	93.6


Alignments

                                      <------------------FR2-IMGT------------------><-----CDR2-IMGT-----><----------------------
                                        W  I  R  Q  P  P  G  E  R  L  E  W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S
                    Query_3796   34   CTGGATTCGGCAGCCCCCAGGGGAGAGACTGGAGTGGATAGCGTATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAG  123
V  93.6% (175/187)  IGHV4-59*08  105  ......C...............A..G.............T.G.......T...........AG...........................  194
                                        W  I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S

                                      ------------------------------FR3-IMGT----------------------------------------------------
                                        R  V  T  I  S  L  D  T  S  K  N  Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C
                    Query_3796   124  TCGAGTCACCATATCACTAGACACGTCCAAGAACCAGTTCTCCCTGAAGATGACCTCTGTGACCGCCGCAGACACGGCCATGTATTACTG  213
V  93.6% (175/187)  IGHV4-59*08  195  ................G................................C...G.........................G..........  284
                                        R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C

                                      ><-----------------------CDR3-IMGT----------------------->                                
                                        A  R  F  L  P  A  V  Q  E  W  L  P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S
                    Query_3796   214  TGCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTGCCAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCGTC  303
V  93.6% (175/187)  IGHV4-59*08  285  .......-----------------------------------------------------------------------------------  291
                                        A  R                                                                                    
D  100.0% (8/8)     IGHD6-19*01  10   --------------------------........--------------------------------------------------------  17
J  96.1% (49/51)    IGHJ2*01     3    -----------------------------------------......................................A.......C..  51

                                        
                                        
                    Query_3796   304  AG  305
J  96.1% (49/51)    IGHJ2*01     52   ..  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_150393

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           319     2e-89
IGHD1-26*01                                                                                           10.3    119  
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCGCAGAGAGAGGAAGGCC	TGGGA	C	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCGCAGAGAGAGGAAGGCCTGGGACCTGGTTCGACCCC	ARAAERGRPGTWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  Y  Y  W  H  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3797   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGCACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.1% (223/242)  IGHV4-59*08  49   ...................C..................................AG..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  Y  S  G  V  T  D  S  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  S  N 
                    Query_3797   91   TGGATTGGCCACATCTATTACAGTGGGGTCACCGACTCCAACCCCTCCCTCAAGGGTCGGGTCACCATATCAGTAGACACTTCCAGCAAC  180
V  92.1% (223/242)  IGHV4-59*08  139  ........GT.T...............AG....A...A................A....A....................G....AG...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  A  E  R  G  R  P  G  T 
                    Query_3797   181  CAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGGGCCGCAGAGAGAGGAAGGCCTGGGACC  270
V  92.1% (223/242)  IGHV4-59*08  229  .............A......C..........................G.....C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  8    -----------------------------------------------------------------------------------.....--  12
J  97.9% (46/47)    IGHJ5*02     5    -----------------------------------------------------------------------------------------.  5

                                      ----------->                                  
                                       W  F  D  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3797   271  TGGTTCGACCCCTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.9% (46/47)    IGHJ5*02     6    ...................A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_34367

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            333     1e-93
IGHD3-10*01                                                                                           12.2    31   
IGHJ6*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAA	GTTCGG	TGTCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTTCGGTGTCTTCGGTTTCGACGTC	AGPKFGVFGFDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  G  W  V  R  Q  T  P  G  K  G  L 
                    Query_3798   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGGGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  93.8% (228/243)  IGHV4-4*02   49   ...................C........................T..T.........A..............C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_3798   91   GAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  93.8% (228/243)  IGHV4-4*02   139  ...................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  F  G  V  F  G  F 
                    Query_3798   181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTTCGGTGTCTTCGGTTTC  270
V  93.8% (228/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (6/6)     IGHD3-10*01  12   -----------------------------------------------------------------------......-------------  17
J  88.9% (40/45)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A.G  23

                                      ----->                                
                                       D  V  W  G  Q  G  A  R  V  T  V  P  S
                    Query_3798   271  GACGTCTGGGGCCAAGGGGCCAGGGTCACCGTCCCCTC  308
J  88.9% (40/45)    IGHJ6*02     24   ..................A...C..........T....  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_34368

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           332     4e-93
IGHD1-20*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGATTTGGCA	ATAACTGG	GCCCACTCGAGAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGATTTGGCAATAACTGGGCCCACTCGAGAGTACTATGGTTTGGACGTC	ARDDLAITGPTREYYGLDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  N  W  I  R  Q  A  P  G  K  G  L  
                    Query_3799   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAACTGGATCCGGCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-11*01  47   .........................................................G.........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  M  S  S  S  G  S  I  I  K  Y  A  D  S  V  E  G  R  F  V  M  S  R  D  N  A  
                    Query_3799   91   AGTGGGTCTCACACATGAGTAGTAGTGGTAGTATCATAAAGTATGCAGACTCTGTGGAGGGCCGATTCGTCATGTCCAGGGACAACGCCG  180
V  92.4% (231/250)  IGHV3-11*01  137  .......T...T....T................C....T.C..C............A...........AC...C...............A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      E  N  S  L  Y  L  Q  M  T  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  D  L  A  I  T  G  
                    Query_3799   181  AAAACTCACTGTATCTGCAAATGACCAGTCTAAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAGAGACGATTTGGCAATAACTGGGC  270
V  92.4% (231/250)  IGHV3-11*01  227  .G......................A...C..G....................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-20*01  4    --------------------------------------------------------------------------------........--  11

                                      -IMGT----------------------->                                 
                                      P  T  R  E  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3799   271  CCACTCGAGAGTACTATGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  96.1% (49/51)    IGHJ6*02     12   -----------.....C...A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_34369

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	247	223	21	3	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_3800   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  87
V  90.3% (223/247)  IGHV4-4*02   49   ..................GC.........T...TCC......A..AG........GG.......................G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  K 
                    Query_3800   88   GAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCAAG  177
V  90.3% (223/247)  IGHV4-4*02   139  .......................T......A................................G.......A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G  W 
                    Query_3800   178  AATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGTGGGTAGCAGTGGCTGG  267
V  90.3% (223/247)  IGHV4-4*02   229  ..CC.GT..........G....GC..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-19*01  6    -----------------------------------------------------------------------------.............  18

                                      -------->                                
                                       L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_3800   268  CTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  308
J  95.0% (38/40)    IGHJ4*02     7    -......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_150399

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            371     7e-105
IGHD3-22*01                                                                                           39.1    3e-07 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	CG	TTACTATGATAGTAGTGGTT	CAGACCACCCCCCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAAAGATCGTTACTATGATAGTAGTGGTTCAGACCACCCCCCTCTTGACTAC	VKDRYYDSSGSDHPPLDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	29	27	27	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	251	9	8	1	0	88.9
Total	N/A	N/A	249	243	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  E 
                    Query_3801   3    TCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGGCATGAACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAG  92
V  97.6% (243/249)  IGHV3-9*01   49   .................................................C....C...................................  138
                                       S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E 

                                      -----------><-------CDR2-IMGT------><----------------------------------------------------F
                                       W  V  S  G  I  S  W  N  S  G  N  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K 
                    Query_3801   93   TGGGTCTCAGGTATCAGTTGGAATAGTGGTAACATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAG  182
V  97.6% (243/249)  IGHV3-9*01   139  ..............T................G..........................................................  228
                                       W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K 

                                      R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                       K  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  D  R  Y  Y  D  S  S  G 
                    Query_3801   183  AAGTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGTAAAAGATCGTTACTATGATAGTAGTGGT  272
V  97.6% (243/249)  IGHV3-9*01   229  ..C..........................................................C.......---------------------  297
                                       N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                      
D  100.0% (20/20)   IGHD3-22*01  4    -----------------------------------------------------------------------...................  22

                                      GT--------------------->                                  
                                       S  D  H  P  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3801   273  TCAGACCACCCCCCTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (20/20)   IGHD3-22*01  23   .---------------------------------------------------------  23
J  100.0% (42/42)   IGHJ4*02     7    ----------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_167176

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           428     3e-122
IGHD1-26*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGCCCTTTTA	TGGGGGCTACT	TGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGCCCTTTTATGGGGGCTACTTGGATTGACCAC	ARCPFMGATWIDH	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	72	3	0	96
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	111	3	0	97.4
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	294	284	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S 
                    Query_3802   4    CAGGTCCAGCTTGTGCAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGT  93
V  96.6% (284/294)  IGHV3-33*01  1    .....G.....G...G..........................................................................  90
                                       Q  V  Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  I  I  Y  Y  D  G  S  N  K  Y  Y 
                    Query_3802   94   AGCTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAATTATATACTATGATGGAAGTAATAAATACTAT  183
V  96.6% (284/294)  IGHV3-33*01  91   ....A....................................................G......GG........................  180
                                       S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  I  N  L  R  A  E  D 
                    Query_3802   184  GCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCAAGAACACGCTGTATCTGCAAATGATCAACCTGAGAGCCGAGGAC  273
V  96.6% (284/294)  IGHV3-33*01  181  .........................................T............................A..G................  270
                                       A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  Y  C  A  R  C  P  F  M  G  A  T  W  I  D  H  W  G  R  G  T  L  V  T  V  S  S 
                    Query_3802   274  ACGGCTGTGTATTACTGTGCGAGATGCCCTTTTATGGGGGCTACTTGGATTGACCACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCA  363
V  96.6% (284/294)  IGHV3-33*01  271  ........................------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  90.9% (10/11)    IGHD1-26*01  8    ----------------------------------....A......---------------------------------------------  18
J  95.2% (40/42)    IGHJ4*02     7    -------------------------------------------------.....T.........A.........................  47

                                       
                                       
                    Query_3802   364  G  364
J  95.2% (40/42)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_267841

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*03                                                                                           344     6e-97
IGHD2-8*01                                                                                            21.8    0.042
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*03	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCCTGG	ATTGCACTGATGGTGTCTGTTAT	GCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATCGCCTGGATTGCACTGATGGTGTCTGTTATGCTTTTGACCAA	VKDRLDCTDGVCYAFDQ	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  N  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3803   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACATTCAGTAACTATGCTATGCACTGGGTCCGCCAGGCTCCTGGGAAGGGACTGG  90
V  94.0% (235/250)  IGHV3-64*03  47   .....................................C.......G..............................A.............  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  P  N  G  G  S  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3803   91   AATATGTTTCAGCGATTAGTCCTAATGGAGGTAGTACATACTTCGCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-64*03  137  .............T......AG......G.....C.......A...............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  D  R  L  D  C  T  D  
                    Query_3803   181  GGAACACTCTATATCTCCAAATGAGCAGTCTGAGAGCTGAGGACACGGCTCTCTATTACTGTGTGAAAGATCGCCTGGATTGCACTGATG  270
V  94.0% (235/250)  IGHV3-64*03  227  A......G..G...G...................................G.G.................--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  82.6% (19/23)    IGHD2-8*01   6    ------------------------------------------------------------------------------....T...A...  17

                                      GT-------------------->                                  
                                      G  V  C  Y  A  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3803   271  GTGTCTGTTATGCTTTTGACCAATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  82.6% (19/23)    IGHD2-8*01   18   ....A..C...----------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    --------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_40404

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3804   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3804   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_3804   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3804   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_282187

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         371     6e-105
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTGG	CTATGGTTCGGGGAGTTATTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATCGTGGCTATGGTTCGGGGAGTTATTATTTTGACAAC	ARDRGYGSGSYYFDN	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_3805     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  97.2% (244/251)  IGHV4-30-4*01  49   ..................A.......................................................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3805     91   CTGGAGTGGATTGGGTACATCCATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  97.2% (244/251)  IGHV4-30-4*01  139  .....................T............G.................................T.....................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  A  Y  H  C  A  R  D  R  G  Y  G  S  G 
                    Query_3805     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGCCTATCACTGTGCCAGAGATCGTGGCTATGGTTCGGGG  270
V  97.2% (244/251)  IGHV4-30-4*01  229  ....................................................TG...T.............-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01    7    -----------------------------------------------------------------------------.............  19

                                        ----------------->                                  
                                         S  Y  Y  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3805     271  AGTTATTATTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  322
D  100.0% (22/22)   IGHD3-10*01    20   .........-------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02       6    ---------......T...............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_282184

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           291     5e-81
IGHD3-22*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAC	ATAGTACTGG	CCGAATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATAGTACTGGCCGAATCATTGACTAT	ARAHSTGRIIDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G 
                    Query_3806   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  87.2% (218/250)  IGHV4-31*01  49   ...................C................A...G.A....TGG..A...C....G.............CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  Y  I  Y  H  V  E  S  T  S  R  N  P  S  L  K  S  Q  L  T  I  S  L  D  P  S 
                    Query_3806   91   CTGGAGTGGATGGGATACATCTATCACGTTGAGAGCACCTCCCGCAACCCGTCCCTCAAGAGTCAACTTACCATTTCACTCGACCCGTCT  180
V  87.2% (218/250)  IGHV4-31*01  139  ...........T..G.........T..AG..G........A.TA....................T.G.......A...G.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  S  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  S  T  G  R  I 
                    Query_3806   181  AAGAGCCAGTTCTCCCTAAAACTGACCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCACATAGTACTGGCCGAATC  270
V  87.2% (218/250)  IGHV4-31*01  229  ....A............G..G....G....G.......................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-22*01  12   -------------------------------------------------------------------------......G...-------  21

                                      -------->                                  
                                       I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3806   271  ATTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.6% (41/42)    IGHJ4*02     7    -.......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_282182

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD1-26*01                                                                                           10.3    113  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCGGAAGAA	GGGAG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGGAAGAAGGGAGATTGACTAC	AGGRREIDY	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	225	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  N  H  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3807   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTAATCACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.8% (225/240)  IGHV4-59*01  49   ........................................G..G.T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  D  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3807   91   TGGATTGGGTATCTTTATTACGATGGTGACACCAAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  93.8% (225/240)  IGHV4-59*01  139  ............A.C......AG...GAG......C......................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  G  R  R  E  I  D  Y  W  G 
                    Query_3807   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGGGCGGAAGAAGGGAGATTGACTACTGGGGC  270
V  93.8% (225/240)  IGHV4-59*01  229  ...............C...............................G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  9    ----------------------------------------------------------------------.....---------------  13
J  100.0% (42/42)   IGHJ4*02     7    ----------------------------------------------------------------------------..............  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_3807   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  100.0% (42/42)   IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_282183

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           424     8e-121
IGHD1-26*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGACGTCTTTCC	TATAGTG	AAAACTATA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGACGTCTTTCCTATAGTGAAAACTATAACTTTGACTAC	ASRRLSYSENYNFDY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	293	282	11	0	96.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_3808   1    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  90
V  96.2% (282/293)  IGHV1-69*12  1    ...........G...........G..................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  V  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  T  F  D  T  A  N  Y 
                    Query_3808   91   GACTATGTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTACCTTTGATACAGCAAACTAC  180
V  96.2% (282/293)  IGHV1-69*12  91   AG.....C..............................................................T.....G.............  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  T  T  A  Y  M  E  L  S  S  L  R  S  V  D 
                    Query_3808   181  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGACCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGTAGAC  270
V  96.2% (282/293)  IGHV1-69*12  181  .................................................G...................................AG...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  S  R  R  L  S  Y  S  E  N  Y  N  F  D  Y  W  G  Q  G  T  L  V  T  V 
                    Query_3808   271  ACGGCCGTATATTACTGTGCGAGCCGACGTCTTTCCTATAGTGAAAACTATAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTC  360
V  96.2% (282/293)  IGHV1-69*12  271  ........G..............-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (7/7)     IGHD1-26*01  3    ------------------------------------.......-----------------------------------------------  9
J  100.0% (45/45)   IGHJ4*02     4    ----------------------------------------------------......................................  41

                                             
                                       S  S  
                    Query_3808   361  TCCTCAG  367
J  100.0% (45/45)   IGHJ4*02     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_282180

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         394     7e-112
IGHD6-19*01                                                                                           18.0    0.65  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	CCACGGCTAC	AGCAGTGGC	GC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGCCACGGCTACAGCAGTGGCGCTGACTAC	GSHGYSSGADY	291	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	77	72	71	1	0	98.6
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	103	11	0	90.4
CDR3-IMGT (germline)	291	295	5	4	1	0	80
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  V  S  E  F  S  F  T  N 
                    Query_3809     6    GTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGTTTCTGAATTCAGCTTTACCAAC  95
V  93.4% (271/290)  IGHV5-10-1*01  4    ...................................................................G.....G..A...........G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         F  W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  D  Y  S 
                    Query_3809     96   TTCTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAGGATTGATCCTAGTGACTCTTATACCGACTACAGC  185
V  93.4% (271/290)  IGHV5-10-1*01  94   .A........G..........................................G...........................A........  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  M  W  S  S  L  R  A  S  D  S 
                    Query_3809     186  CCGTCCTTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCATCACAACTGCCTACCTAATGTGGAGCAGCCTGCGGGCCTCGGACAGC  275
V  93.4% (271/290)  IGHV5-10-1*01  184  ..............................................GC...........GCA.............AA...........C.  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><-----------CDR3-IMGT----------->                                  
                                         A  I  Y  Y  C  G  S  H  G  Y  S  S  G  A  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3809     276  GCCATTTATTATTGTGGGAGCCACGGCTACAGCAGTGGCGCTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  357
V  93.4% (271/290)  IGHV5-10-1*01  274  .....G.....C....C...--------------------------------------------------------------  293
                                         A  M  Y  Y  C  A                                                                 
D  100.0% (9/9)     IGHD6-19*01    7    ------------------------------.........-------------------------------------------  15
J  97.6% (40/41)    IGHJ4*02       8    -----------------------------------------..............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_282181

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           371     7e-105
IGHD2-2*01                                                                                            10.3    125   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGGA	N/A	CCAGC	GCTGGCGACAATC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGACCAGCGCTGGCGACAATCACTACTTTGACTCC	ARTSAGDNHYFDS	263	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	29	1	0	96.7
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	148	21	17	4	0	81
FR3-IMGT	149	262	114	104	10	0	91.2
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	269	253	16	0	94.1


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  T  T  S  G  M  C  V  T  W  I  R
                    Query_3810   1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCACCACTAGTGGAATGTGTGTGACCTGGATCCG  90
V  94.1% (253/269)  IGHV2-70*01  30   ...........................................................G....................G.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  T  W  D  D  E  R  T  Y  N  T  S  L  Q  T  R  L  T
                    Query_3810   91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACTCATTACTTGGGATGATGAGAGAACGTACAACACATCTCTGCAGACCAGGCTCAC  180
V  94.1% (253/269)  IGHV2-70*01  120  ........................................GA............T.A.TAC....G..........A.............  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        V  S  K  D  S  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  T
                    Query_3810   181  CGTCTCTAAGGACAGCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACCTACTACTGTGCACGGAC  270
V  94.1% (253/269)  IGHV2-70*01  210  .A....C.......C.........................................................G..T.............-  298
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   
D  100.0% (5/5)     IGHD2-2*01   18   -----------------------------------------------------------------------------------------.  18

                                      -------CDR3-IMGT-------------->                                  
                                        S  A  G  D  N  H  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3810   271  CAGCGCTGGCGACAATCACTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  335
D  100.0% (5/5)     IGHD2-2*01   19   ....-------------------------------------------------------------  22
J  97.9% (47/48)    IGHJ4*02     1    -----------------............A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_327360

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           10.3    131   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_3811   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  95.2% (276/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  F  A  Q 
                    Query_3811   92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTTTGCACAG  181
V  95.2% (276/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3811   182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_3811   272  ATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  95.2% (276/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_282188

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         330     1e-92
IGHD2-8*02                                                                                            19.9    0.16 
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GCCTCCAT	TATTCTCCTGGTGGTG	CTTATTGG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGCCTCCATTATTCTCCTGGTGGTGCTTATTGGGACTCC	ARGLHYSPGGAYWDS	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  I  R  S  G  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_3812     4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATCAGAAGCGGTGGTTATTACTGGGGTTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  92.4% (230/249)  IGHV4-30-4*01  50   .....TCC...A....CA......................C..T....A...C......A..............................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  Q  W  I  A  Y  S  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_3812     94   TGCAGTGGATTGCGTACAGCTATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCA  183
V  92.4% (230/249)  IGHV4-30-4*01  140  ..G.........G.....T.....................C.................................................  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        K  N  Q  L  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  S  P  G  
                    Query_3812     184  AGAACCAGTTGTCCCTGAAGGTGAGGTCTGTGACTGCCGCAGACACGGCCGTATATTACTGTGCCAGAGGCCTCCATTATTCTCCTGGTG  273
V  92.4% (230/249)  IGHV4-30-4*01  230  ..........C.........C....C..........................G................---------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD2-8*02     5    -----------------------------------------------------------------------------....G.A......  17

                                        ---------------->                                  
                                        G  A  Y  W  D  S  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_3812     274  GTGCTTATTGGGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  324
D  87.5% (14/16)    IGHD2-8*02     18   ...------------------------------------------------  20
J  95.0% (38/40)    IGHJ4*02       9    -----------....A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_260128

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGTCGTATTCTTT	TGATAGTAGTGGT	CAGAGTCCCGCG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGTCGTATTCTTTTGATAGTAGTGGTCAGAGTCCCGCGTACTTTGACTAC	ARDLSYSFDSSGQSPAYFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3813   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  C  I  S  G  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3813   91   AGTGGGTCTCATGCATCAGTGGTGGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  ............C...T...A..A..................................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  S  Y  S  F  D  
                    Query_3813   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGTCGTATTCTTTTGATA  270
V  98.4% (246/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD3-22*01  10   -------------------------------------------------------------------------------------.....  14

                                      R3-IMGT------------------------>                                  
                                      S  S  G  Q  S  P  A  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_3813   271  GTAGTGGTCAGAGTCCCGCGTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  336
D  100.0% (13/13)   IGHD3-22*01  15   ........----------------------------------------------------------  22
J  97.8% (45/46)    IGHJ4*02     3    --------------------........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_260129

Length=487
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           300     1e-83
IGHD2-21*01                                                                                           12.2    45   


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	N/A	VH	No	N/A	N/A	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTCACCTTTCACAACGCCCCC	CATATT	N/A	N/A	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	220	28	0	88.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  Y  I  R  R  N  N  D  F  W  V  W  I  R  Q  P  P  G  K  G 
                    Query_3814   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTACATCAGGAGGAATAATGACTTCTGGGTCTGGATACGTCAGCCCCCCGGGAAGGGG  90
V  88.7% (220/248)  IGHV4-39*01  49   ..................................C......C..T.G..G.T...A.....G......C..C........A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  A  I  H  Y  T  G  S  T  Y  Y  N  S  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3814   91   CTGGAGTGGATTGGGGCTATCCATTATACTGGGAGCACCTATTACAACTCGTCCCTCAAGAGTCGAGTCACCATCTCCGTGGACACGTCC  180
V  88.7% (220/248)  IGHV4-39*01  139  ...............AG....T......G............C......C.........................A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT---------------------------------------------------->                           
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  T  D  T  S  V  F  Y  C  A  R  L  T  F  H  N  A  P 
                    Query_3814   181  AAGAACCAGTTCTCCCTGAACCTAAGGTCTGTGACCGCCACAGACACGTCAGTTTTCTACTGTGCGAGGCTCACCTTTCACAACGCCCCC  270
V  88.7% (220/248)  IGHV4-39*01  229  ....................G..G..C............G........G.T..G.AT...........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                            
                                       H  I 
                    Query_3814   271  CATATT  276
D  100.0% (6/6)     IGHD2-21*01  3    ......  8


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 48283128


Query= Query_260125

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            349     2e-98
IGHD3-10*01                                                                                           43.0    2e-08
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GTGGCCCCT	TATTATTATGGTTCGGGGAGTTATT	CT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTGGCCCCTTATTATTATGGTTCGGGGAGTTATTCTTAC	AVAPYYYGSGSYSY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  L  S  A  F  W  M  T  W  V  R  Q  G  P  G  K  G  L  
                    Query_3815   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCCTTAGTGCCTTTTGGATGACCTGGGTCCGCCAGGGTCCAGGGAAGGGGCTGG  90
V  95.5% (234/245)  IGHV3-7*03   47   ....................G.................T.....AG..A........G..............C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  G  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3815   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGGGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.5% (234/245)  IGHV3-7*03   137  .................................A........................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  G  D  D  T  A  V  Y  Y  C  A  V  A  P  Y  Y  Y  G  S  
                    Query_3815   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGGCGACGACACGGCCGTGTATTACTGTGCGGTGGCCCCTTATTATTATGGTTCGG  270
V  95.5% (234/245)  IGHV3-7*03   227  ....C...............................C...G........................-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  96.0% (24/25)    IGHD3-10*01  2    --------------------------------------------------------------------------.....C..........  17

                                      ------------->                                  
                                      G  S  Y  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3815   271  GGAGTTATTCTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  96.0% (24/25)    IGHD3-10*01  18   .........---------------------------------------  26
J  100.0% (37/37)   IGHJ4*02     12   -----------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_260126

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD2-8*01                                                                                            12.2    31   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GTATCC	CTAATG	CCACCTTCA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGTATCCCTAATGCCACCTTCAACTTTGACTAC	AKGIPNATFNFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3816   1    GGTCCCTGAGACTCTCCTGTGCAGCATCTGGATTCACCTTTACCACCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-23*01  47   .........................C................G..G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  V  I  G  V  S  D  T  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3816   91   ACTGGGTCTCAGTAATTGGTGTTAGTGATACTAAGACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-23*01  137  .G..........CT...A...G.....G.GG..GC.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  I  P  N  A  T  F  
                    Query_3816   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGGTATCCCTAATGCCACCTTCA  270
V  94.4% (235/249)  IGHV3-23*01  227  .....................................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-8*01   12   ---------------------------------------------------------------------------......---------  17

                                      ---------->                                  
                                      N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3816   271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (45/45)   IGHJ4*02     4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_260127

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           411     4e-117
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGAGGG	AGTAGTGGTTATT	TTAGCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAGGGAGTAGTGGTTATTTTAGCCTC	ARRGSSGYFSL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	276	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  G  S  G  F  S  F  T  T  Y
                    Query_3817   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGGGTTCTGGATTCAGTTTTACCACCTA  90
V  95.5% (276/289)  IGHV5-51*03  6    ..............................................................A...........A...C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  Y  P  S  D  S  D  T  R  Y  S  P
                    Query_3817   91   CTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATATATCCTAGTGACTCTGACACCAGATATAGTCC  180
V  95.5% (276/289)  IGHV5-51*03  96   .......................T.................................C......G..........T........C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  N  S  L  R  A  S  D  T  A
                    Query_3817   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAACAGCCTGAGGGCCTCGGACACCGC  270
V  95.5% (276/289)  IGHV5-51*03  186  .................................................................G........A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        M  Y  Y  C  A  R  R  G  S  S  G  Y  F  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3817   271  CATGTATTATTGTGCGAGACGAGGGAGTAGTGGTTATTTTAGCCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  95.5% (276/289)  IGHV5-51*03  276  .........C.........-------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                              
D  100.0% (13/13)   IGHD3-22*01  14   -------------------------.............------------------------------------------  26
J  100.0% (35/35)   IGHJ4*02     14   ---------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_260120

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            310     1e-86
IGHD1-26*01                                                                                           10.3    118  
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACTTTCGCTTCGC	ACTAC	CTACATT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACTTTCGCTTCGCACTACCTACATTTGGACGTC	ARTFASHYLHLDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	102	12	0	89.5
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T  T  N  Q  W  W  T  W  V  R  Q  P  P  G  R  G  L 
                    Query_3818   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCACTAATCAGTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAGGGGGCTG  90
V  90.2% (222/246)  IGHV4-4*01   49   ........................................G..G..G.A.C.......G.......................A.......  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  F  P  N  G  N  T  N  Y  S  P  S  L  K  S  R  L  T  I  S  M  A  K  S  K 
                    Query_3818   91   GAGTGGATTGGGGAAATTTTTCCTAATGGGAACACCAACTACAGCCCGTCCCTCAAGAGTCGACTCACCATTTCAATGGCTAAGTCCAAG  180
V  90.2% (222/246)  IGHV4-4*01   139  .................C.A..A..G.....G...........A...................G.......A...G.A.AC.........  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  V  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  T  F  A  S  H  Y  L  H 
                    Query_3818   181  AACCAGGTCTCCCTGAAACTTAACTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAACTTTCGCTTCGCACTACCTACAT  270
V  90.2% (222/246)  IGHV4-4*01   229  ......T..........G..G.G................................G..........------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (5/5)     IGHD1-26*01  16   -------------------------------------------------------------------------------.....------  20

                                      -------->                              
                                       L  D  V  W  G  Q  G  T  T  V  S  V  S 
                    Query_3818   271  TTGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCC  309
J  97.4% (37/38)    IGHJ6*02     22   -..............................C.......  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_47513

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           300     8e-84
IGHD2-15*01                                                                                           12.2    32   
IGHJ3*01                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGCCG	GGTAGC	GTCC	CTTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATGGGCCGGGTAGCGTCCCTTATGATGTT	VRDGPGSVPYDV	249	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	110	57	45	6	6	78.9
CDR2-IMGT	111	134	24	19	5	0	79.2
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	256	8	6	2	0	75
Total	N/A	N/A	256	226	24	6	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><-----------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  A  S  R  F  S  F  R  S  H  W  M  N  W  L  R  Q  V  P  G  K  G  Q  
                    Query_3819   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTAGATTCAGCTTCAGGAGCCACTGGATGAACTGGCTCCGCCAAGTTCCAGGGAAGGGGCAGG  90
V  88.3% (226/256)  IGHV3-74*01  47   .............................G......C......T...T........C.....G.........C............-----  131
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G     

                                      -------------------><-------CDR2-IMGT------><---------------------------------------------
                                      G  L  V  W  L  S  H  I  N  P  D  G  T  R  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  
                    Query_3819   91   GGCTGGTGTGGCTTTCACATATTAATCCTGATGGGACCAGAACAAATTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACG  180
V  88.3% (226/256)  IGHV3-74*01  132  -..........G.C....G.......AG........GT..C....GC..........................................A  220
                                         L  V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------CDR3-IMG
                                      D  A  K  D  T  L  F  L  Q  M  T  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  G  P  G  S  
                    Query_3819   181  ACGCCAAGGACACGCTGTTTCTGCAAATGACCAGTCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGTGAGAGATGGGCCGGGTAGCG  270
V  88.3% (226/256)  IGHV3-74*01  221  ........A.........A...........A.................................C....CA.....--------------  296
                                      N  A  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                 
D  100.0% (6/6)     IGHD2-15*01  17   -----------------------------------------------------------------------------------......-  22

                                      T------------>                                  
                                      V  P  Y  D  V  W  G  Q  G  I  M  V  T  V  S  P  
                    Query_3819   271  TCCCTTATGATGTTTGGGGCCAAGGGATCATGGTCACCGTGTCTCCAG  318
J  86.7% (39/45)    IGHJ3*01     6    ---...T......C.............CA...........C...T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_260122

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           361     4e-102
IGHD2-21*01                                                                                           10.3    122   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCT	CTATT	TCTATCAATTAGACT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTTCTATCAATTAGACTACTCCTTTGACTTC	ARGLYFYQLDYSFDF	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_3820   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  96.4% (240/249)  IGHV4-31*03  50   .....TCC...A............................C.................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  P  
                    Query_3820   94   TGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGCCTA  183
V  96.4% (240/249)  IGHV4-31*03  140  ......................................................................................T...  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  S  S  R  K  L  S  S  V  T  A  A  V  T  A  V  Y  Y  C  A  R  G  L  Y  F  Y  Q  L  
                    Query_3820   184  AGAACCAGTCCTCCCGGAAGCTGAGCTCTGTGACTGCCGCGGTCACGGCCGTGTATTACTGTGCGAGAGGCCTCTATTTCTATCAATTAG  273
V  96.4% (240/249)  IGHV4-31*03  230  .........T.....T..........................A..........................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-21*01  22   -------------------------------------------------------------------------.....------------  26

                                      ---------------->                                  
                                      D  Y  S  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3820   274  ACTACTCCTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  95.8% (46/48)    IGHJ4*02     1    ---...A........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_159489

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3821   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ......................................C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_3821   91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P 
                    Query_3821   181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC  270
V  90.6% (221/244)  IGHV4-59*01  229  ...........G...C....C...........T............G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  93.5% (43/46)    IGHJ5*02     6    ------------------------------------------------------------------------------............  17

                                                                        
                                       W  S  Q  G  A  L  V  S  V  S  S  
                    Query_3821   271  TGGAGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  304
J  93.5% (43/46)    IGHJ5*02     18   ...G........A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_38709

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           355     3e-100
IGHD3-16*02                                                                                           12.2    31    
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTATCG	ACATTGGTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTCTTTGCCTAT	ARHYRHWFFAY	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	239	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  L  T  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_3822   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCCTCACCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.2% (239/251)  IGHV4-39*01  49   ...............................G....A...G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3822   91   CTGGAGTGGATTGGGAGTTTGTATTATAGTGGCAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  95.2% (239/251)  IGHV4-39*01  139  ..................A.C...........G...............................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  H  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  H  W  F  F 
                    Query_3822   181  AAGAACCACTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATTATCGACATTGGTTCTTT  270
V  95.2% (239/251)  IGHV4-39*01  229  ........G..C........G....G...T.........................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-16*02  25   -----------------------------------------------------------------------......-------------  30
J  93.2% (41/44)    IGHJ4*02     5    --------------------------------------------------------------------------------------....  8

                                      ----->                                  
                                       A  Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_3822   271  GCCTATTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  310
J  93.2% (41/44)    IGHJ4*02     9    .A...C...........................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_38706

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            322     2e-90
IGHD1-26*01                                                                                           12.2    32   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGTTTC	TATAGT	CGCGTTGGCTGCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTTTCTATAGTCGCGTTGGCTGCTTCTTTGACTAC	ARCFYSRVGCFFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  E  F  T  F  S  T  Y  Y  M  S  W  V  C  Q  A  P  G  K  G  L  
                    Query_3823   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGAATTCACCTTTAGTACCTACTACATGAGCTGGGTCTGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.5% (227/248)  IGHV3-7*01   47   .....................C........G..............G...T.GG............C........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  R  H  D  E  T  V  K  T  Y  V  D  S  V  K  G  R  F  T  T  S  R  D  N  A  
                    Query_3823   91   AGTGGGTGGCAAACATAAGGCACGATGAAACTGTGAAAACCTATGTGGACTCTGTGAAGGGCCGATTCACCACGTCCAGAGACAACGCCA  180
V  91.5% (227/248)  IGHV3-7*01   137  ..........C.......A...A....G..G..A....TA................................TC................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  C  F  Y  S  R  V  G  
                    Query_3823   181  AGAACTCACTGTATCTGCAAATGGATAGCCTGAGACCTGAGGACACGGCTGTGTATTACTGTGCGAGATGTTTCTATAGTCGCGTTGGCT  270
V  91.5% (227/248)  IGHV3-7*01   227  .......................A.C.........G.C..............................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------......----------  8

                                      ------------->                                  
                                      C  F  F  D  Y  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_3823   271  GCTTCTTTGACTACTGGGGCCAGGGAGTGTTGGTCACCGTCTCCTCAG  318
J  90.9% (40/44)    IGHJ4*02     5    ----......................ACCC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_38707

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAGGG	AGTAGTGGTTATT	TTAGCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAGGGAGTAGTGGTTATTTTAGCCTC	ARRGSSGYFSL	292	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	17	7	0	70.8
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	110	4	0	96.5
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	294	277	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  K  G  S  D  F  S  F  A  
                    Query_3824   5    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGATTTCAGTTTTGCCA  94
V  94.2% (277/294)  IGHV5-51*01  2    ....G.........................................G............................GA.A...C...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      R  N  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  H  D  S  D  T  R  Y  
                    Query_3824   95   GGAACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTAGAGTGGATGGGGAACATCTATCCTCATGACTCTGATACCAGATACA  184
V  94.2% (277/294)  IGHV5-51*01  92   .CT........................................G.............T..........GG....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  T  S  I  S  T  A  F  L  Q  W  S  S  R  K  A  S  D  
                    Query_3824   185  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCGGAAGGCCTCGGACA  274
V  94.2% (277/294)  IGHV5-51*01  182  .......................................A.................A.................T..............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------CDR3-IMGT----------->                                  
                                      T  A  M  Y  Y  C  A  R  R  G  S  S  G  Y  F  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3824   275  CCGCCATGTATTATTGTGCGAGACGAGGGAGTAGTGGTTATTTTAGCCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  94.2% (277/294)  IGHV5-51*01  272  .............C..........------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                              
D  100.0% (13/13)   IGHD3-22*01  14   -----------------------------.............------------------------------------------  26
J  100.0% (35/35)   IGHJ4*02     14   -------------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_38704

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTACTTTGAT	GGTGCTGGCTCTTACCTAGGTTTCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACTTTGATGGTGCTGGCTCTTACCTAGGTTTCCAC	ARDYFDGAGSYLGFH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  I  S  G  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3825   1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCATCATCAGTGGCTATGGCATGAACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-33*01  47   ....................G...............C.T.....A...........C.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_3825   91   AGTGGGTGGCCCTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAAGGCCGCTTCACCGTCTCCAGAGACAACTCCA  180
V  93.6% (234/250)  IGHV3-33*01  137  ..........AG..............................................G.....A......A.............T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  D  T  P  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  F  D  G  A  G  
                    Query_3825   181  AGGACACACCGTATCTGCAGATGGACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTACTTTGATGGTGCTGGCT  270
V  93.6% (234/250)  IGHV3-33*01  227  ..A....G.T.........A...A..............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-22*01  4    ----------------------------------------------------------------------.....A....----------  13

                                      ---------------->                                  
                                      S  Y  L  G  F  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3825   271  CTTACCTAGGTTTCCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (36/36)   IGHJ4*02     13   ---------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_38705

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           428     3e-122
IGHD2-15*01                                                                                           27.6    8e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TGGGGA	GATATTGTACTGATGGTACCTGC	CCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGGGAGATATTGTACTGATGGTACCTGCCCTTTTGACTCC	ARLGRYCTDGTCPFDS	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	282	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  Q  G  S  G  Y  S  F  P  S  H
                    Query_3826   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTCAGGGTTCTGGATACAGCTTTCCCAGCCA  90
V  97.2% (282/290)  IGHV5-51*01  6    .....................A............................A..........A....................A.....T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_3826   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGAGACTCTGATACCAGATACAGCCC  180
V  97.2% (282/290)  IGHV5-51*01  96   ..................................................................T.......................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  I  A
                    Query_3826   181  GTCCTTCCAGGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACATCGC  270
V  97.2% (282/290)  IGHV5-51*01  186  .........A............................................................................C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        M  Y  Y  C  A  R  L  G  R  Y  C  T  D  G  T  C  P  F  D  S  W  G  Q  G  T  L  V  S  V  S
                    Query_3826   271  CATGTATTACTGTGCGAGACTGGGGAGATATTGTACTGATGGTACCTGCCCTTTTGACTCCTGGGGCCAGGGAACCCTGGTCTCCGTCTC  360
V  97.2% (282/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  87.0% (20/23)    IGHD2-15*01  3    --------------------------.........G..G.....G....-----------------------------------------  25
J  95.3% (41/43)    IGHJ4*02     6    ----------------------------------------------------.......A......................A.......  43

                                           
                                        S  
                    Query_3826   361  CTCAG  365
J  95.3% (41/43)    IGHJ4*02     44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_38702

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           330     1e-92
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TGGACTTCAGTC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGACTTCAGTCCTTTGACTAC	ARDGLQSFDY	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	231	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  G  V  G  Y  L  W  S  W  I  R  Q  Q  P  G  K  G 
                    Query_3827   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATAAGTGGTGTTGGTTATCTCTGGAGCTGGATCCGCCAGCAGCCAGGGAAGGGC  90
V  92.0% (231/251)  IGHV4-31*03  49   ..................A...................C..CA...G......CTA.....................C............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  H  T  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  E  T  S 
                    Query_3827   91   CTGGAGTGGATTGGGTACATCTTTCACACTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATTTCACTAGAGACGTCT  180
V  92.0% (231/251)  IGHV4-31*03  139  ......................A.T...G.............................A.........T.....A...G....C......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       K  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  L  Q  S  F  D 
                    Query_3827   181  AAAAACCAGTTCTCCCTGAGGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGGACTTCAGTCCTTTGAC  270
V  92.0% (231/251)  IGHV4-31*03  229  ..G................A.....G.............................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  100.0% (44/44)   IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3827   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (44/44)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_38703

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           282     4e-78
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	217	27	6	86.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_3828   4    CCCTGAGACTCTCCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.8% (217/250)  IGHV4-34*01  50   .....TCC...A..........C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_3828   94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.8% (217/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_3828   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.8% (217/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_3828   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_38700

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  L  R  Q  A  P  G  K  G  P  
                    Query_3829   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGCTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...G........................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_3829   91   AGTGGGTCTCAGCGATTACTGGGAGTGGTAGTAGCACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  .............T....G...T......G..............G......................................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_3829   181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  93.6% (234/250)  IGHV3-23*01  227  ...............................G....................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3829   271  ATTCACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_38701

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            442     2e-126
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	287	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_3830   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  98.6% (287/291)  IGHV1-2*04   6    ..................G.............AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_3830   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.6% (287/291)  IGHV1-2*04   96   ..........................................................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_3830   181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  98.6% (287/291)  IGHV1-2*04   186  ..........................................................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W  G  Q
                    Query_3830   271  CGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGGGGCCA  360
V  98.6% (287/291)  IGHV1-2*04   276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------------------....A...........................  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_3830   361  AGGGACCACGGTCACCGTCTCCTCA  385
J  98.2% (56/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_125328

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  H
                    Query_3831   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATCA  90
V  92.4% (268/290)  IGHV5-51*01  6    ....................C........A.....................G.........A......C.........C.......GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  P
                    Query_3831   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCCC  180
V  92.4% (268/290)  IGHV5-51*01  96   ...................................................G.......A.....G.......G....C.....C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  A
                    Query_3831   181  GTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCGC  270
V  92.4% (268/290)  IGHV5-51*01  186  ...............G........C...................................G.......G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_3831   271  CTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  350
V  92.4% (268/290)  IGHV5-51*01  276  .A.......C.....G....------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    -----------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_125329

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           343     2e-96
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CATGCTTTCCTCGACTGATATGT	CGTTCGGGGGA	TTTTTGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACATGCTTTCCTCGACTGATATGTCGTTCGGGGGATTTTTGATTGACCAG	ARDMLSSTDMSFGGFLIDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  S  S  R  S  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_3832   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGACTCCATCAGCAGTAGAAGTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGG  90
V  93.6% (235/251)  IGHV4-39*02  49   ...................C...........G...............T...........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  E  S  R  V  A  I  S  I  D  T  S 
                    Query_3832   91   CTGGAATGGATTGGGAATATCTATTATAGTGGGAGCACCGACTACAACCCGTCCCTCGAGAGTCGAGTCGCCATATCGATAGACACGTCC  180
V  93.6% (235/251)  IGHV4-39*02  139  .....G..........G......................T.................A...........A.......CG...........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  M  L  S  S  T  D 
                    Query_3832   181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACCGCCGCAGACACGGCTATTTATTACTGTGCGAGAGACATGCTTTCCTCGACTGAT  270
V  93.6% (235/251)  IGHV4-39*02  229  ........C............C....C........................G.G.................-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       M  S  F  G  G  F  L  I  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3832   271  ATGTCGTTCGGGGGATTTTTGATTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  90.9% (10/11)    IGHD3-16*01  13   ----....T......-------------------------------------------------  23
J  95.2% (40/42)    IGHJ4*02     7    ----------------------.....T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_149470

Length=412
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           425     3e-121
IGHD3-16*01                                                                                           35.3    4e-06 
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCTA	GTATTATGTTTACATTTGGGGGAG	AAACACACCGTCTGAC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAGTATTATGTTTACATTTGGGGGAGAAACACACCGTCTGACTGATGCTTTTGAGATC	ARASIMFTFGGETHRLTDAFEI	291	356	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	71	0	0	100
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	290	281	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  S  
                    Query_3833   7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTAGCAGCT  96
V  96.9% (281/290)  IGHV5-51*03  5    ..............................................................................G.....C.....  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  E  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  G  
                    Query_3833   97   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGGAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATACCAGATACGGGC  186
V  96.9% (281/290)  IGHV5-51*03  95   ................................A....................A................................A.C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  E  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_3833   187  CGTCCTTCGAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCG  276
V  96.9% (281/290)  IGHV5-51*03  185  ........C................C................................................................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><----------------------------CDR3-IMGT--------------------------->          
                                      A  M  Y  Y  C  A  R  A  S  I  M  F  T  F  G  G  E  T  H  R  L  T  D  A  F  E  I  W  G  Q  
                    Query_3833   277  CCATGTATTACTGCGCGAGAGCTAGTATTATGTTTACATTTGGGGGAGAAACACACCGTCTGACTGATGCTTTTGAGATCTGGGGCCAAG  366
V  96.9% (281/290)  IGHV5-51*03  275  .............T......----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  91.7% (22/24)    IGHD3-16*01  1    ------------------------........A....G..........------------------------------------------  24
J  96.0% (48/50)    IGHJ3*02     1    ----------------------------------------------------------------............T.............  26

                                                              
                                      G  T  V  V  T  V  S  S  
                    Query_3833   367  GGACAGTGGTCACCGTCTCTTCAG  390
J  96.0% (48/50)    IGHJ3*02     27   .....A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40393728


Query= Query_145652

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           428     3e-122
IGHD2-2*02                                                                                            16.1    2.6   
IGHJ3*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-2*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAAGGAGT	TTGTAGTGATATGAGTTGCTATA	TTTGGGA	TGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAAGGAGTTTGTAGTGATATGAGTTGCTATATTTGGGATGACGCCTTTGATATT	ARDKGVCSDMSCYIWDDAFDI	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	282	8	0	97.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  I  Y 
                    Query_3834   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTAGCATCTAC  91
V  97.2% (282/290)  IGHV1-18*04  7    ..................................................................................C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_3834   92   GGTATCTCCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAACTATGCACAG  181
V  97.2% (282/290)  IGHV1-18*04  97   ......AG.....................................................C............................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3834   182  AACCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  97.2% (282/290)  IGHV1-18*04  187  ..G.........................................................C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------------CDR3-IMGT-------------------------->               
                                       V  Y  Y  C  A  R  D  K  G  V  C  S  D  M  S  C  Y  I  W  D  D  A  F  D  I  W  G  Q  G  T 
                    Query_3834   272  GTGTACTACTGTGCGAGAGATAAAGGAGTTTGTAGTGATATGAGTTGCTATATTTGGGATGACGCCTTTGATATTTGGGGCCAAGGGACA  361
V  97.2% (282/290)  IGHV1-18*04  277  .....T..............----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  78.3% (18/23)    IGHD2-2*02   7    -----------------------------.......AG..CC..C.......--------------------------------------  29
J  94.0% (47/50)    IGHJ3*02     1    -----------------------------------------------------------...T..T........C...............  31

                                                         
                                       M  V  T  V  S  S  
                    Query_3834   362  ATGGTCACCGTCTCTTCAG  380
J  94.0% (47/50)    IGHJ3*02     32   ...................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_125321

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           344     6e-97
IGHD4-17*01                                                                                           14.1    8.4  
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-17*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	CTACGGT	ACCTACGCGCGAACGTCCGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACGGTACCTACGCGCGAACGTCCGGTTTTGATTTC	ARDYGTYARTSGFDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  N  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3835   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAATTCCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-21*01  47   ....................................C.....G.AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  G  S  S  S  H  I  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3835   91   AGTGGATCTCATACATTAGTGGTAGTAGTAGTCACATATATTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-21*01  137  .....G......C.......A...........T.......C............G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      N  N  S  L  Y  L  Q  L  N  T  L  T  A  D  D  T  A  V  Y  Y  C  A  R  D  Y  G  T  Y  A  R  
                    Query_3835   181  ACAACTCACTGTATCTGCAATTGAACACCCTGACAGCCGACGACACGGCTGTGTATTACTGTGCGAGAGACTACGGTACCTACGCGCGAA  270
V  94.0% (235/250)  IGHV3-21*01  227  .G..................A......G.....G......G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD4-17*01  4    ----------------------------------------------------------------------.......-------------  10

                                      ---------------->                                  
                                      T  S  G  F  D  F  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3835   271  CGTCCGGTTTTGATTTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  97.7% (43/44)    IGHJ3*01     7    -------.......G....................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_125322

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           313     1e-87
IGHD2-15*01                                                                                           18.0    0.59 
IGHJ4*03                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*03	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	ACCCATTTTGCAAG	GGTGGTAGGTGC	GTTTCGGGCTTGAGTGGCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCATTTTGCAAGGGTGGTAGGTGCGTTTCGGGCTTGAGTGGCCAC	ARDPFCKGGRCVSGLSGH	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  S  G  Y  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_3836   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGCCCTTCAGTGGCTACTACTGGAACTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  91.0% (222/244)  IGHV4-34*01  49   .................................T..........T..........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  R  G  G  S  T  T  S  S  P  S  L  K  S  R  V  S  M  S  V  D  T  S  K  N 
                    Query_3836   91   TGGATTGGGGAAATCAATCGCGGTGGAAGCACCACCTCCAGCCCGTCCCTCAAGAGTCGAGTCAGCATGTCGGTAGACACCTCCAAGAAC  180
V  91.0% (222/244)  IGHV4-34*01  139  ...................ATA............A..A..A.......................C...A..A........G.........  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  *  T  L  T  S  G  T  A  T  D  T  A  V  Y  Y  C  A  R  D  P  F  C  K  G  G  R  C 
                    Query_3836   181  CAGTTCTCCTAGACCCTGACCTCTGGGACCGCCACGGACACGGCTGTCTATTACTGTGCGAGAGACCCATTTTGCAAGGGTGGTAGGTGC  270
V  91.0% (222/244)  IGHV4-34*01  229  .........CT..AG....G.....T.......G.............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD2-15*01  14   ------------------------------------------------------------------------------........C...  25

                                      -------------------->                                  
                                       V  S  G  L  S  G  H  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3836   271  GTTTCGGGCTTGAGTGGCCACTGGGGCCGAGGGACCCTGGTCACCGTCTCCTCAG  325
J  97.2% (35/36)    IGHJ4*03     13   -------------------.........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_125323

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           416     2e-118
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ2*01                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGA	TACTATGACAGTAGTGGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTC	ARDGYYDSSGYYYDL	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	74	1	0	98.7
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	298	8	7	1	0	87.5
Total	N/A	N/A	296	281	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  S  Y  S  F  S 
                    Query_3837   3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTAGTTACAGTTTTAGC  92
V  94.9% (281/296)  IGHV1-18*04  1    .....T.....................................................................G......CC....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  H  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  D  Y 
                    Query_3837   93   AGCCACGGTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGGTGGATCAGCGGTTACAATGGTAACACAGACTAT  182
V  94.9% (281/296)  IGHV1-18*04  91   ...T..................................A.................A..........C................A.....  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  R  K  F  Q  G  R  V  T  M  T  A  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  T  S  D  D 
                    Query_3837   183  GCACGGAAGTTCCAGGGCAGAGTCACCATGACCGCAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGACATCTGACGAC  272
V  94.9% (281/296)  IGHV1-18*04  181  ....A....C.......................A.............................................G..........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  R  D  G  Y  Y  D  S  S  G  Y  Y  Y  D  L  W  G  R  G  T  L  V  T  V 
                    Query_3837   273  ACGGCCGTGTATTACTGTGCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTCTGGGGCCGGGGAACCCTGGTCACTGTC  362
V  94.9% (281/296)  IGHV1-18*04  271  .....................A....----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  95.2% (20/21)    IGHD3-22*01  5    ------------------------------........T............---------------------------------------  25
J  91.3% (42/46)    IGHJ2*01     8    ---------------------------------------------------....T...T...........T..C...............  46

                                             
                                       S  S  
                    Query_3837   363  TCCTCAG  369
J  91.3% (42/46)    IGHJ2*01     47   .......  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_145656

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           358     4e-101
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ2*01                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCAAAGCAGG	TTACTATGATAATAGTGG	CCCAGGTCAAGAG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGCCAAAGCAGGTTACTATGATAATAGTGGCCCAGGTCAAGAGTTCGATCTC	TRAKAGYYDNSGPGQEFDL	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  E  F  T  F  S  H  Y  G  M  H  W  V  R  K  A  P  G  K  G  L  
                    Query_3838   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGAATTCACCTTCAGTCACTATGGCATGCACTGGGTCCGCAAGGCTCCAGGCAAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-33*01  47   ..............................G.............AG......................C.....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3838   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAAAAGTATGCAGACTCCGTGAAGGGGCGATTCACCATCTCCAGAGACAACTCCG  180
V  96.0% (239/249)  IGHV3-33*01  137  ......................................T.C....................C.......................T...A  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      E  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  A  K  A  G  Y  Y  D  
                    Query_3838   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTACGAGAGCCAAAGCAGGTTACTATGATA  270
V  96.0% (239/249)  IGHV3-33*01  227  ..............................................................G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD3-22*01  4    -------------------------------------------------------------------------------...........  14

                                      -IMGT----------------------->                                  
                                      N  S  G  P  G  Q  E  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3838   271  ATAGTGGCCCAGGTCAAGAGTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCTTCAG  333
D  94.4% (17/18)    IGHD3-22*01  15   G......--------------------------------------------------------  21
J  97.7% (42/43)    IGHJ2*01     11   --------------------......................................C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_125325

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           339     2e-95
IGHD1-20*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGAATACAA	GTATAAC	GGAATA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGAATACAAGTATAACGGAATAGGTATGGACGTC	TRSEYKYNGIGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3839   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTAAGTAATAATTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (231/245)  IGHV3-53*01  47   ........................................C....GC..C.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_3839   91   AGTGGGTCTCAGTTATTTATAGTGGTGGTACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.3% (231/245)  IGHV3-53*01  137  ......................C.......G..............................A............................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      T  T  L  Y  L  Q  M  N  S  L  R  A  E  D  S  A  V  Y  Y  C  T  R  S  E  Y  K  Y  N  G  I  
                    Query_3839   181  CCACACTGTATCTTCAAATGAACAGTTTGAGAGCCGAGGACTCGGCCGTGTATTACTGTACGAGATCAGAATACAAGTATAACGGAATAG  270
V  94.3% (231/245)  IGHV3-53*01  227  A...G....................CC..............A.................G.....-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD1-20*01  2    ----------------------------------------------------------------------------.......-------  8
J  100.0% (45/45)   IGHJ6*02     18   -----------------------------------------------------------------------------------------.  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3839   271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (45/45)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_173787

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           350     8e-99
IGHD5-12*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACCCCTCGGGA	TGGCTAC	AATCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATACCCCTCGGGATGGCTACAATCCTTTTGACTAC	VRDTPRDGYNPFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3840   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCATGTTCAGTAGATATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-33*01  47   ....................................CC........C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  S  D  G  S  Y  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3840   91   AGTGGGTGGCAGTTATATGGTCTGATGGAAGTTATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (237/250)  IGHV3-33*01  137  .....................A..........A.........................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  K  L  Y  L  E  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  T  P  R  D  G  Y  
                    Query_3840   181  AGAACAAGTTATATCTGGAAATGAGCAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGTCAGAGATACCCCTCGGGATGGCTACA  270
V  94.8% (237/250)  IGHV3-33*01  227  ......C.C.G......C......A...........................G..........CG.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD5-12*01  11   ----------------------------------------------------------------------------------.......-  17

                                      ------------->                                  
                                      N  P  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_3840   271  ATCCTTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  97.7% (42/43)    IGHJ4*02     6    -----......................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_173786

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            361     4e-102
IGHD5-12*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTCTACTG	GTGCATATACTGGCTACGA	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGGTTCTACTGGTGCATATACTGGCTACGATGACTTC	GRGSTGAYTGYDDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3841   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  96.4% (240/249)  IGHV3-7*03   47   .............................................G...........................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  N  I  N  Q  D  G  S  K  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3841   91   AGTGGGTGGCCAACATAAACCAAGATGGAAGTAAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (240/249)  IGHV3-7*03   137  ...................G............G.........................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  L  Y  Y  C  G  R  G  S  T  G  A  Y  T  
                    Query_3841   181  AGAACTCACTATATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCCTTTATTACTGTGGGAGAGGTTCTACTGGTGCATATACTG  270
V  96.4% (240/249)  IGHV3-7*03   227  ..........G............A..........................G.G..........C.....---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  89.5% (17/19)    IGHD5-12*01  1    ------------------------------------------------------------------------------...G.....G..  12

                                      ------------->                                  
                                      G  Y  D  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3841   271  GCTACGATGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  89.5% (17/19)    IGHD5-12*01  13   .......-----------------------------------------  19
J  97.6% (40/41)    IGHJ4*02     8    -------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_344562

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           355     3e-100
IGHD3-22*01                                                                                           27.6    8e-04 
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	CAGG	ACTATGATAGTAGT	AGGGGGG	ACGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAGGACTATGATAGTAGTAGGGGGGACGATAAGGACGTC	VRQDYDSSRGDDKDV	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3842   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.6% (238/249)  IGHV4-31*03  49   ................................................G.........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  R  I  G  Y  I  Y  S  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  S  M  S  V  D  T  S 
                    Query_3842   91   CTGGAGCGGATTGGATACATCTATTCCAGTGGGAGTACCTACTACAACCCGTCCCTCAAGAGTCGAGTTAGCATGTCCGTAGACACGTCT  180
V  95.6% (238/249)  IGHV4-31*03  139  ......T.......G..........A.........C..................................C...A..A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  H  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  Q  D  Y  D  S  S  R 
                    Query_3842   181  AAGAACCACTTCTCCCTGAACCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGTGAGACAGGACTATGATAGTAGTAGG  270
V  95.6% (238/249)  IGHV4-31*03  229  ........G...........G...........................................C....---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (14/14)   IGHD3-22*01  6    -------------------------------------------------------------------------..............---  19

                                      ----------------->                                 
                                       G  D  D  K  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3842   271  GGGGACGATAAGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  321
J  95.7% (45/47)    IGHJ6*02     16   ----...G..T........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_208899

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           403     1e-114
IGHD3-22*01                                                                                           33.4    2e-05 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCGGATC	ACTATGATAGTAGTGGT	C	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCGGATCACTATGATAGTAGTGGTCACTACTACTACAATATGGACGTC	ARVPDHYDSSGHYYYNMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  V  S  S  Y
                    Query_3843   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCGTCAGCAGCTA  90
V  94.5% (274/290)  IGHV1-69*01  6    ..................G............................................................T..........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  I  L  M  F  D  T  P  N  Y  A  Q
                    Query_3843   91   TGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTGGAGTGGATGGGAGTGATCATCCTTATGTTTGATACACCAAACTACGCACA  180
V  94.5% (274/290)  IGHV1-69*01  96   ..C....................................T.............G........C...C....G....G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  Q  G  R  V  T  I  T  A  D  E  S  T  N  T  A  Y  M  E  L  S  N  L  R  S  E  D  T  A
                    Query_3843   181  GAACTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCGACGAACACAGCCTACATGGAGTTGAGCAACCTGAGATCTGAGGACACGGC  270
V  94.5% (274/290)  IGHV1-69*01  186  ...G...................................C....G................C......G.....................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        V  Y  F  C  A  R  V  P  D  H  Y  D  S  S  G  H  Y  Y  Y  N  M  D  V  W  G  Q  G  T  T  V
                    Query_3843   271  CGTTTATTTCTGTGCGAGAGTTCCGGATCACTATGATAGTAGTGGTCACTACTACTACAATATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  94.5% (274/290)  IGHV1-69*01  276  ...G....A...........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD3-22*01  6    -----------------------------.................--------------------------------------------  22
J  96.4% (54/56)    IGHJ6*02     7    -----------------------------------------------...........GG..............................  49

                                                   
                                        T  V  S  S 
                    Query_3843   361  CACCGTCTCCTCA  373
J  96.4% (54/56)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_61887

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         360     1e-101
IGHD5-18*01                                                                                           14.1    8.6   
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GAAG	ACAGATATGG	GGGACTTTGGACCTGCAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAAGACAGATATGGGGGACTTTGGACCTGCATTACTTTGACTTC	ARGRQIWGTLDLHYFDF	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_3844     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  F  Y  N  T  E  T  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  D  R  S 
                    Query_3844     91   CTGGAGTGGATTGGATACTTCTATAATACTGAGACCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCACTAGACAGGTCC  180
V  96.0% (240/250)  IGHV4-30-2*01  139  ..............G...A.....C...G..G..G.......................A...................G...........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  Q  I  W  G  T 
                    Query_3844     181  AAGAACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAAGACAGATATGGGGGACT  270
V  96.0% (240/250)  IGHV4-30-2*01  229  ...................A......C...........................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD5-18*01    7    --------------------------------------------------------------------------....C.....------  16

                                        MGT-------------------->                                  
                                         L  D  L  H  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3844     271  TTGGACCTGCATTACTTTGACTTCTGGGGCCAGGGCACCCTCGTCACCGTCTCCTCAG  328
J  93.5% (43/46)    IGHJ4*02       3    ------------..........A............A.....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_61886

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           357     1e-100
IGHD3-16*01                                                                                           10.3    114   
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	A	TTGGG	TCTGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGGGTCTGCGTTTGACCAC	ARIGSAFDH	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3845   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTAG  90
V  96.0% (238/248)  IGHV3-48*03  47   ........................................C...............................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  S  G  S  T  R  Y  T  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3845   91   AGTGGGTTTCATACATTAGTACCAGTGGTTCTACCAGATACACCGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (238/248)  IGHV3-48*03  137  .....................GT......AG.....T....TA...............................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  I  G  S  A  F  D  H  
                    Query_3845   181  AGAACTCACTGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAATTGGGTCTGCGTTTGACCACT  270
V  96.0% (238/248)  IGHV3-48*03  227  ...................A................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-16*01  16   ---------------------------------------------------------------------.....----------------  20
J  97.7% (42/43)    IGHJ4*02     6    --------------------------------------------------------------------------------......T...  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3845   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  97.7% (42/43)    IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_61885

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         329     3e-92
IGHD3-9*01                                                                                            21.8    0.043
IGHJ2*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ACTCTTATTTTT	CGATCTTCTGACTGGTT	TGAGCACGGA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACTCTTATTTTTCGATCTTCTGACTGGTTTGAGCACGGATACTTCGATCTC	ARTLIFRSSDWFEHGYFDL	246	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  R  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  S  P  G  K  G  
                    Query_3846     4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTCGCTCCATCAGCAGTGGTGGTCACTACTGGAGTTGGATCCGCCAGTCCCCAGGGAAGGGCC  93
V  92.3% (229/248)  IGHV4-30-4*01  50   .....TCC...A....CA...........G..................A.T.......................C...............  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  Y  S  G  T  V  Y  H  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_3846     94   TGGAGTGGATTGGGTACATCTACTACAGTGGGACCGTCTACCACAATCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCA  183
V  92.3% (229/248)  IGHV4-30-4*01  140  ......................T..........G.AC....T....C...........................................  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                        K  N  Q  V  S  L  K  L  I  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  L  I  F  R  S  S  
                    Query_3846     184  AGAACCAGGTCTCCCTGAAGCTAATCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAACTCTTATTTTTCGATCTTCTG  273
V  92.3% (229/248)  IGHV4-30-4*01  230  ........T.............G.G...........................................----------------------  297
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  88.2% (15/17)    IGHD3-9*01     7    --------------------------------------------------------------------------------....A..T..  16

                                        -IMGT----------------------->                                  
                                        D  W  F  E  H  G  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3846     274  ACTGGTTTGAGCACGGATACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  336
D  88.2% (15/17)    IGHD3-9*01     17   .......--------------------------------------------------------  23
J  100.0% (46/46)   IGHJ2*01       8    -----------------..............................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_61884

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           350     8e-99
IGHD4-17*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	TTTCCA	GACTACGGTGAC	AACTTTTTACGAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTTTCCAGACTACGGTGACAACTTTTTACGAT	TFQTTVTTFYD	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	250	2	2	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3847   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTCAGTAATGCCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-15*01  47   .......T............................C.........C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  N  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_3847   91   AGTGGGTTGGCCGTATTAAAAGCAAAAATGATGGTGGAACAACAGACTACGCTGCACCCGTGAAAGGCAGATTTACCATCTCAAGAGATG  180
V  94.8% (237/250)  IGHV3-15*01  137  ...........................C.........G...................................C................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  K  T  V  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  F  Q  T  T  V  T  
                    Query_3847   181  ATTCAAAGAAGACGGTGTATCTGCAAATGAATAGCCTGAAAACCGAGGACACAGCCGTGTACTATTGTACTTTCCAGACTACGGTGACAA  270
V  94.8% (237/250)  IGHV3-15*01  227  .......A..C...C................C.............................T..C.....--------------------  296
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (12/12)   IGHD4-17*01  2    ----------------------------------------------------------------------------............--  13

                                      ---------->                                  
                                      T  F  Y  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3847   271  CTTTTTACGATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (34/34)   IGHJ4*02     15   -----------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_61883

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           324     8e-91
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CTGACGAC	GTAGTGGTTATTAC	CACTCTCCCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCTGACGACGTAGTGGTTATTACCACTCTCCCGTTTGACTAC	AKADDVVVITTLPFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  Y  A  M  S  W  V  R  Q  A  P  G  G  G  L  
                    Query_3848   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCCACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGGGGGGCCTGG  90
V  91.6% (228/249)  IGHV3-23*01  47   ............................................AG..................................AA...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  T  G  S  G  T  N  T  Y  Y  R  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3848   91   AGTGGGTCTCAGGTATTACTGGTAGTGGTACTAACACATACTACAGAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  91.6% (228/249)  IGHV3-23*01  137  ............C.....G..........GG..G..........GC........................................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  I  L  E  M  N  G  L  R  A  E  D  T  A  I  Y  Y  C  A  K  A  D  D  V  V  V  I  
                    Query_3848   181  AGAACACACTTATTCTGGAAATGAACGGCCTGAGAGCCGAGGACACGGCCATATATTATTGTGCGAAAGCTGACGACGTAGTGGTTATTA  270
V  91.6% (228/249)  IGHV3-23*01  227  .......G..GTA....C........A.......................G.......C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (14/14)   IGHD3-22*01  15   -----------------------------------------------------------------------------.............  27

                                      T------------------>                                  
                                      T  T  L  P  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_3848   271  CCACTCTCCCGTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  324
D  100.0% (14/14)   IGHD3-22*01  28   .-----------------------------------------------------  28
J  97.7% (42/43)    IGHJ4*02     6    -----------.....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_61880

Length=419
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           371     8e-105
IGHD3-3*02                                                                                            12.2    39    
IGHJ3*02                                                                                              85.3    9e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGAC	CATATTTGG	GAATATGTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGACCATATTTGGGAATATGTATGATGCTTTTAATATC	ARPTIFGNMYDAFNI	318	362	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	104	102	72	3	27	70.6
CDR1-IMGT	105	128	24	23	1	0	95.8
FR2-IMGT	129	179	51	50	1	0	98
CDR2-IMGT	180	203	24	23	1	0	95.8
FR3-IMGT	204	317	114	107	7	0	93.9
CDR3-IMGT (germline)	318	323	6	6	0	0	100
Total	N/A	N/A	321	281	13	27	87.5


Alignments

                                      <----------------------------------------------FR1-IMGT-----------------------------------
                                       Q  V  Q  L  V  Q  S  G  A  E  A  R  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_3849   3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGCGAGGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGGGGCACCTTCAGC  92
V  87.5% (281/321)  IGHV1-69*01  1    .......................G.......T..A......................................-----------------  73
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A                   

                                      -----------><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       N  F  A  S  G  G  T  F  S  N  Y  A  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I 
                    Query_3849   93   AACTTTGCTTCTGGAGGCACCTTCAGCAACTATGCTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATC  182
V  87.5% (281/321)  IGHV1-69*01  74   ----------..................G...........G.................................................  153
                                                S  G  G  T  F  S  S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       L  P  I  F  G  T  A  S  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  A  S  T  T  A  Y  M 
                    Query_3849   183  CTCCCTATCTTTGGTACAGCAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAAGCCTCGACCACAGCCTACATG  272
V  87.5% (281/321)  IGHV1-69*01  154  A.....................A..............................................T..A...G.............  243
                                       I  P  I  F  G  T  A  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M 

                                      --------------------------------------------><-----------------CDR3-IMGT----------------->
                                       E  L  S  S  L  R  S  E  D  T  A  I  Y  Y  C  A  R  P  T  I  F  G  N  M  Y  D  A  F  N  I 
                    Query_3849   273  GAGCTGAGTAGCCTGAGATCTGAGGACACGGCCATATATTACTGTGCGAGACCGACCATATTTGGGAATATGTATGATGCTTTTAATATC  362
V  87.5% (281/321)  IGHV1-69*01  244  ........C........................G.G...............---------------------------------------  294
                                       E  L  S  S  L  R  S  E  D  T  A  V  Y  Y  C  A  R                                        
D  88.9% (8/9)      IGHD3-3*02   8    --------------------------------------------------------...T.....-------------------------  16
J  96.0% (48/50)    IGHJ3*02     1    --------------------------------------------------------------------------..........G.....  16

                                                                        
                                       W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3849   363  TGGGGCCAAGGGACAATGGTCACCGTCTCCTCAG  396
J  96.0% (48/50)    IGHJ3*02     17   .............................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41130072


Query= Query_84812

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*02                                                                                            364     5e-103
IGHD2-21*02                                                                                           14.1    9.4   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*02	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCACTTTG	GGTGGGGACT	CTCTCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCACTTTGGGTGGGGACTCTCTCCCTTTGACTAT	ARDHFGWGLSPFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	95	19	0	83.3
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	262	29	0	90


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T  D  H
                    Query_3850   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCACCGACCA  90
V  90.0% (262/291)  IGHV1-2*02   6    ..................G..........................................................C........G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  H  W  V  R  Q  A  P  G  H  G  P  E  W  M  G  W  I  N  P  K  T  G  G  I  S  Y  A  Q
                    Query_3850   91   CTATATCCACTGGGTGCGACAGGCCCCTGGACATGGGCCTGAGTGGATGGGATGGATCAACCCTAAGACTGGTGGCATAAGTTATGCACA  180
V  90.0% (262/291)  IGHV1-2*02   96   ......G..........................A....T...........................C.G........C..AC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  D  G  R  V  T  M  T  R  D  T  S  I  T  T  V  Y  M  E  L  S  R  L  T  S  G  D  T  A
                    Query_3850   181  GAGATTTGACGGCCGGGTCACGATGACCAGGGACACGTCCATTACTACAGTCTACATGGAGTTGTCGAGGCTGACATCTGGCGACACGGC  270
V  90.0% (262/291)  IGHV1-2*02   186  ..AG...C.G...A.......C....................C.GC....C..........C..AGC.......G.....A.........  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  D  H  F  G  W  G  L  S  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3850   271  CGTATATTACTGTGCGAGAGATCACTTTGGGTGGGGACTCTCTCCCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  90.0% (262/291)  IGHV1-2*02   276  ...G.................--------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                       
D  90.0% (9/10)     IGHD2-21*02  11   -----------------------------.....T....--------------------------------------------------  20
J  97.7% (43/44)    IGHJ4*02     5    ---------------------------------------------.........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_132230

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           383     1e-108
IGHD2-2*01                                                                                            18.0    0.67  
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTGTTAGTGAATC	CCAGCTGCT	GTTT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CCGAGAAGTGTTAGTGAATCCCAGCTGCTGTTTTGGTTCGACCCC	PRSVSESQLLFWFDP	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	69	5	0	93.2
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	19	5	0	79.2
FR3-IMGT	177	290	114	105	9	0	92.1
CDR3-IMGT (germline)	291	296	6	5	1	0	83.3
Total	N/A	N/A	293	269	24	0	91.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  G  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_3851   4    AGGTCCAGCTGGTACAGTCTGGAGCAGGGGTGAAAAAGCCGGGGGAATCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCA  93
V  91.8% (269/293)  IGHV5-51*03  2    ....G........G.............A..................G......................G............C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  E  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  T  G  D  P  D  A  R  Y  
                    Query_3851   94   GCTACTGGATTGGCTGGGAGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATATATACGGGTGACCCTGATGCCAGATATA  183
V  91.8% (269/293)  IGHV5-51*03  92   ..........C.......T.....................................A....C...C.T......T.....A.......C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  K  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  
                    Query_3851   184  GTCCGTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGGGCAGCCTCAAGGCCTCGGACA  273
V  91.8% (269/293)  IGHV5-51*03  182  .C.........C.....................C..................................A.......G.............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  L  Y  Y  C  P  R  S  V  S  E  S  Q  L  L  F  W  F  D  P  W  G  Q  *  T  L  V  T  V  
                    Query_3851   274  CCGCTTTGTATTATTGTCCGAGAAGTGTTAGTGAATCCCAGCTGCTGTTTTGGTTCGACCCCTGGGGCCAGTGAACCCTGGTCACCGTCA  363
V  91.8% (269/293)  IGHV5-51*03  272  ....CA.......C...G.....-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (9/9)     IGHD2-2*01   18   -------------------------------------.........--------------------------------------------  26
J  95.7% (44/46)    IGHJ5*02     6    --------------------------------------------------.....................G.................T  45

                                            
                                      T  S  
                    Query_3851   364  CCTCAG  369
J  95.7% (44/46)    IGHJ5*02     46   ......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_61889

Length=432
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           335     5e-94
IGHD6-13*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              79.5    5e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCCATCCCGAGGGGGA	AGCAGCAGCTGGTAC	CGAAAGGGGC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCCATCCCGAGGGGGAAGCAGCAGCTGGTACCGAAAGGGGCACTTCTACGCAATGGATGTC	ASPSRGGSSSWYRKGHFYAMDV	311	376	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	71	4	0	94.7
CDR1-IMGT	77	121	45	20	4	21	44.4
FR2-IMGT	122	172	51	47	4	0	92.2
CDR2-IMGT	173	196	24	16	8	0	66.7
FR3-IMGT	197	310	114	107	7	0	93.9
CDR3-IMGT (germline)	311	315	5	5	0	0	100
Total	N/A	N/A	314	266	27	21	84.7


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><--------------
                                       Q  M  Q  L  V  Q  S  G  A  E  V  T  K  P  G  S  S  V  K  I  S  C  K  A  S  G  G  T  F  R 
                    Query_3852   2    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGACGAAGCCTGGGTCCTCGGTGAAGATCTCCTGCAAGGCTTCTGGAGGCACCTTCAGG  91
V  84.7% (266/314)  IGHV1-69*01  1    ...G...................G..........A......................G...............................C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      ---CDR1-IMGT-----------------><--------------------FR2-IMGT---------------------><-------C
                                       S  S  G  Y  T  F  G  T  Y  A  M  T  W  V  Q  Q  A  P  G  Q  G  L  E  W  I  G  G  I  I  A 
                    Query_3852   92   TCTTCTGGATACACCTTCGGAACTTATGCCATGACCTGGGTGCAACAGGCCCCTGGACAAGGGCTTGAGTGGATAGGAGGGATCATCGCC  181
V  84.7% (266/314)  IGHV1-69*01  91   ---------------------.GC.....T..C.G........G..............................G............C.T  159
                                                            S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P 

                                      DR2-IMGT------><----------------------------------------------------FR3-IMGT--------------
                                       I  A  G  V  I  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  A  N  T  A  Y  L  E  V 
                    Query_3852   182  ATCGCTGGTGTAATAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCGGCGAATACAGCCTACTTGGAGGTG  271
V  84.7% (266/314)  IGHV1-69*01  160  ...TT....AC.GC...................................................CA...GC.........A.....C..  249
                                       I  F  G  T  A  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L 

                                      --------------------------------------><----------------------------CDR3-IMGT-------------
                                       S  S  L  R  S  E  D  T  A  V  Y  Y  C  A  S  P  S  R  G  G  S  S  S  W  Y  R  K  G  H  F 
                    Query_3852   272  AGCAGCCTGAGATCTGAGGACACGGCCGTCTATTACTGTGCGAGCCCATCCCGAGGGGGAAGCAGCAGCTGGTACCGAAAGGGGCACTTC  361
V  84.7% (266/314)  IGHV1-69*01  250  .............................G..............----------------------------------------------  293
                                       S  S  L  R  S  E  D  T  A  V  Y  Y  C  A                                                 
D  100.0% (15/15)   IGHD6-13*01  7    ------------------------------------------------------------...............---------------  21
J  92.5% (49/53)    IGHJ6*02     10   -------------------------------------------------------------------------------------...A.  14

                                      -------------->                                 
                                       Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3852   362  TACGCAATGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  409
J  92.5% (49/53)    IGHJ6*02     15   ....GT.....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 42497568


Query= Query_61888

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           338     4e-95
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGAA	AGTGGTTA	CTA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGAAAGTGGTTACTATGAAGCTTTTGATATC	ARSESGYYEAFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  L  S  S  Y  D  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3853   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCCTCAGCAGCTATGATATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.5% (232/248)  IGHV3-30*04  47   ...................................A..T....T.......C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  I  I  S  Y  D  G  G  N  K  N  Y  A  D  S  V  R  G  R  F  T  L  S  R  D  N  S  
                    Query_3853   91   AGTGGGTGTCAATTATATCATATGATGGAGGAAATAAAAATTACGCAGACTCCGTGAGGGGCCGATTCACCTTGTCCAGGGACAATTCCA  180
V  93.5% (232/248)  IGHV3-30*04  137  ........G..G.................A.T......T.C................A.............A.C.....A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  F  L  Q  M  N  S  L  S  A  E  D  T  A  V  Y  Y  C  A  R  S  E  S  G  Y  Y  E  
                    Query_3853   181  AGAACACGCTGTTTCTGCAAATGAACAGCCTGAGCGCTGAGGACACGGCTGTGTATTACTGTGCGAGATCGGAAAGTGGTTACTATGAAG  270
V  93.5% (232/248)  IGHV3-30*04  227  ............A.....................A.................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-22*01  17   --------------------------------------------------------------------------........--------  24
J  94.0% (47/50)    IGHJ3*02     1    -------------------------------------------------------------------------------------...T.  5

                                      ---------->                                  
                                      A  F  D  I  W  G  P  G  T  M  V  T  V  S  S  
                    Query_3853   271  CTTTTGATATCTGGGGCCCAGGGACAATGGTCACCGTCTCCTCAG  315
J  94.0% (47/50)    IGHJ3*02     6    ..................A.....................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_47380

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           346     2e-97
IGHD2-21*02                                                                                           18.0    0.61 
IGHJ1*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTCACAGTATTGTGGCGC	TGGCGACTGCTA	CGCCTCC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCACAGTATTGTGGCGCTGGCGACTGCTACGCCTCCGCTGAGTACTTCCAGCAC	ARHSQYCGAGDCYASAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3854   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*08  49   .............................................T..........C.................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_3854   91   TGGATTGGGTATATCTATTCCAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGTTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*08  139  ...................A...............C...................................AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       H  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  R  A  R  H  S  Q  Y  C  G  A  G  D 
                    Query_3854   181  CACTTCTCCCTGACCCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACCGTGCGAGACATTCACAGTATTGTGGCGCTGGCGAC  270
V  95.1% (233/245)  IGHV4-59*08  229  ..G..........AG....G..................................T..........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD2-21*02  13   -----------------------------------------------------------------------------------...T...  19

                                      MGT-------------------------->                                  
                                       C  Y  A  S  A  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3854   271  TGCTACGCCTCCGCTGAGTACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  334
D  91.7% (11/12)    IGHD2-21*02  20   .....-----------------------------------------------------------  24
J  96.2% (50/52)    IGHJ1*01     1    ------------.....A.........................................C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_47381

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           344     6e-97
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGCCCTACTTATTATGCCAA	TAGTGGTT	CAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCCCTACTTATTATGCCAATAGTGGTTCAGACTTTGACTAC	ARGGPTYYANSGSDFDY	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  Y  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3855   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGCAGCTACTACATGAGCTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  94.7% (233/246)  IGHV3-53*01  47   ...........................................T...A.........................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  H  S  A  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_3855   91   AGTGGGTCTCAGTTATTCATAGCGCTGGAAGTACATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.7% (233/246)  IGHV3-53*01  137  .................T......G...T..C.....C..C.................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------------CDR3-IMGT-
                                      N  T  L  N  L  Q  M  N  S  L  R  V  Q  D  T  A  V  Y  Y  C  A  R  G  G  P  T  Y  Y  A  N  
                    Query_3855   181  ACACGCTAAATCTTCAAATGAACAGCCTGAGAGTCCAGGACACGGCCGTGTATTACTGTGCGAGAGGAGGCCCTACTTATTATGCCAATA  270
V  94.7% (233/246)  IGHV3-53*01  227  .......GT........................C.G..............................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-22*01  16   ----------------------------------------------------------------------------------------..  17

                                      ------------------->                                  
                                      S  G  S  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3855   271  GTGGTTCAGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (8/8)     IGHD3-22*01  18   ......------------------------------------------------  23
J  100.0% (45/45)   IGHJ4*02     4    ---------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_254460

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           427     1e-121
IGHD1-26*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGACGTCTTTCC	TATAGTG	AAAACTATA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGACGTCTTTCCTATAGTGAAAACTATAACTTTGACTAC	ASRRLSYSENYNFDY	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	74	1	0	98.7
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	110	4	0	96.5
CDR3-IMGT (germline)	292	296	5	5	0	0	100
Total	N/A	N/A	293	283	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_3856   4    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  93
V  96.6% (283/293)  IGHV1-69*01  1    .......................G..................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  V  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  T  F  D  T  A  N  Y 
                    Query_3856   94   GACTATGTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTACCTTTGATACAGCAAACTAC  183
V  96.6% (283/293)  IGHV1-69*01  91   AG.....C..............................................................T.....G.............  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  T  T  A  Y  M  E  L  S  S  L  R  S  V  D 
                    Query_3856   184  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGACCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGTAGAC  273
V  96.6% (283/293)  IGHV1-69*01  181  .................................................G...................................AG...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  S  R  R  L  S  Y  S  E  N  Y  N  F  D  Y  W  G  Q  G  T  P  V  T  V 
                    Query_3856   274  ACGGCCGTATATTACTGTGCGAGCCGACGTCTTTCCTATAGTGAAAACTATAACTTTGACTACTGGGGCCAGGGAACCCCGGTCACCGTC  363
V  96.6% (283/293)  IGHV1-69*01  271  ........G..............-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (7/7)     IGHD1-26*01  3    ------------------------------------.......-----------------------------------------------  9
J  97.8% (44/45)    IGHJ4*02     4    ----------------------------------------------------...........................T..........  41

                                             
                                       S  S  
                    Query_3856   364  TCCTCAG  370
J  97.8% (44/45)    IGHJ4*02     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_191809

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           406     1e-115
IGHD1-26*01                                                                                           12.2    37    
IGHJ3*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ATAGCGGAAACTACT	TATGTTAGAGACTC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGATAGCGGAAACTACTTATGTTAGAGACTCTGATGCTTTTGATATC	ARDRIAETTYVRDSDAFDI	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  N  N  Y 
                    Query_3857   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTCAATAACTAT  91
V  94.8% (275/290)  IGHV1-18*01  7    .................................................................T..............T.CC.G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  I  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_3857   92   GGTTTCATCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAG  181
V  94.8% (275/290)  IGHV1-18*01  97   ...A...G..................................................................................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  K  G  R  F  T  M  T  T  D  T  S  T  S  T  A  S  V  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3857   182  AAATTCAAGGGCAGATTCACCATGACCACGGACACATCCACGAGCACAGCCTCCGTGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (275/290)  IGHV1-18*01  187  ..GC..C........G.............A......................A.A...................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  A  R  D  R  I  A  E  T  T  Y  V  R  D  S  D  A  F  D  I  W  G  Q  G  T  M  V 
                    Query_3857   272  GTGTATTACTGCGCGAGAGATCGGATAGCGGAAACTACTTATGTTAGAGACTCTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTC  361
V  94.8% (275/290)  IGHV1-18*01  277  ...........T........----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  80.0% (12/15)    IGHD1-26*01  4    ------------------------....T..G.G.....---------------------------------------------------  18
J  100.0% (50/50)   IGHJ3*02     1    -----------------------------------------------------.....................................  37

                                                   
                                       T  V  S  S  
                    Query_3857   362  ACCGTCTCTTCAG  374
J  100.0% (50/50)   IGHJ3*02     38   .............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_254466

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           302     3e-84
IGHD4-17*01                                                                                           16.1    2.5  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	TTTGGAGGGCCTCGCCTCGGG	TACGGTGA	TAAGTCTTGAACGATCACAGG	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATTTGGAGGGCCTCGCCTCGGGTACGGTGATAAGTCTTGAACGATCACAGGACTCCTACTACTACGCCATGGCCGTC	ANLEGLASGTVISLERSQDSYYYAMAV	243	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	220	27	0	89.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  A  Y  A  M  H  W  V  R  Q  A  P  D  K  G  L  
                    Query_3858   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTTAGTGCCTATGCCATGCACTGGGTCCGCCAGGCTCCAGACAAGGGACTGG  90
V  89.1% (220/247)  IGHV3-30*18  47   ....................G...................C...AG.....G..........................G......G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  M  S  Y  D  G  Y  V  K  S  Y  A  D  S  V  K  G  R  F  P  I  S  R  D  E  A  
                    Query_3858   91   AGTGGGTGGCAGTTATGTCCTATGATGGATATGTTAAGTCCTATGCAGACTCCGTGAAGGGCCGATTCCCCATCTCCAGAGACGAAGCCA  180
V  89.1% (220/247)  IGHV3-30*18  137  ................A..A.........AG.AA...A.A............................A..............A.TT...  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      N  N  T  V  F  L  Q  M  N  S  L  R  Q  E  D  T  A  I  Y  Y  C  A  N  L  E  G  L  A  S  G  
                    Query_3858   181  ACAACACGGTGTTTCTGCAAATGAACAGCCTGAGACAGGAGGACACGGCTATATATTACTGTGCGAATTTGGAGGGCCTCGCCTCGGGTA  270
V  89.1% (220/247)  IGHV3-30*18  227  .G......C...A......................GCT............G.G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD4-17*01  5    ----------------------------------------------------------------------------------------..  6

                                      --------CDR3-IMGT----------------------------------->                              
                                      T  V  I  S  L  E  R  S  Q  D  S  Y  Y  Y  A  M  A  V  W  G  Q  G  T  P  V  T  V  S 
                    Query_3858   271  CGGTGATAAGTCTTGAACGATCACAGGACTCCTACTACTACGCCATGGCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCC  353
D  100.0% (8/8)     IGHD4-17*01  7    ......-----------------------------------------------------------------------------  12
J  91.1% (51/56)    IGHJ6*02     4    ---------------------------...A...........GT....A...................A..............  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_47385

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD3-10*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGGAT	GGGAGTTA	CGAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATGGGAGTTACGAAACTTTGACTAC	ARGGWELRNFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_3859   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACAGCTTCACCAACTA  90
V  96.2% (278/289)  IGHV5-51*03  6    ....................C.............................................T..............T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  T  Y  S  P
                    Query_3859   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCACATACAGCCC  180
V  96.2% (278/289)  IGHV5-51*03  96   ............................................................................A...G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  M  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3859   181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACATGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (278/289)  IGHV5-51*03  186  ........A..........................A........G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  F  C  A  R  G  G  W  E  L  R  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3859   271  CATCTATTTCTGTGCGAGAGGGGGATGGGAGTTACGAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.2% (278/289)  IGHV5-51*03  276  ...G....A..........----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD3-10*01  17   --------------------------........-------------------------------------------------  24
J  100.0% (45/45)   IGHJ4*02     4    --------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_47387

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD1-1*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GGGAGGGGG	CAACTGG	GAACCCTTTAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTAC	ARGGGNWEPFTY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	288	267	21	0	92.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  Y
                    Query_3860   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCTA  90
V  92.7% (267/288)  IGHV5-51*01  6    .................................................................G............C......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  L  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  I  V  F  P  D  D  S  D  T  R  Y  S  P
                    Query_3860   91   CTGGCTCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGATCGTTTTTCCTGATGACTCTGATACCAGATACAGCCC  180
V  92.7% (267/288)  IGHV5-51*01  96   ....A.............C..G.........A..........G............A.C.A.....G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  I  T  I  S  A  D  K  S  I  T  T  A  F  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_3860   181  GTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCACCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACACCGC  270
V  92.7% (267/288)  IGHV5-51*01  186  .......C.......GG...........................G........A...........G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  G  N  W  E  P  F  T  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3860   271  CATCTATTACTGTGCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.7% (267/288)  IGHV5-51*01  276  ...G...........G..-----------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------.......-------------------------------------------------  11
J  100.0% (38/38)   IGHJ4*02     11   ---------------------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_47389

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            372     2e-105
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AGGAGACTTCTAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAAGGAGACTTCTATTACTACTACTACACTTTGGACGTC	AREGDFYYYYYTLDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3861  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  97.6% (244/250)  IGHV3-9*01  47   ..........................................................................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  I  S  W  N  S  D  T  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3861  91   AGTGGGTCTCAGGTATTAGTTGGAACAGTGATACCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (244/250)  IGHV3-9*01  137  .........................T....G..G........................................................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  R  E  G  D  F  Y  Y  Y  
                    Query_3861  181  AGAACTCCCTGTATCTGCAAATGAATAGTCTGAGACCTGAGGACACGGCCTTGTATTACTGTGCAAGAGAAGGAGACTTCTATTACTACT  270
V  97.6% (244/250)  IGHV3-9*01  227  .........................C.........G..............................A...--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
J  94.7% (54/57)    IGHJ6*02    6    -----------------------------------------------------------------------------------.......  12

                                     ---------------->                                 
                                     Y  Y  T  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3861  271  ACTACACTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  94.7% (54/57)    IGHJ6*02    13   .....GG.A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_254468

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           397     8e-113
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TTTCCAAGGCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTCCAAGGCGACTACTCGGACTTC	ARDFQGDYSDF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  T  C  K  A  S  G  Y  P  F  S  T  Y 
                    Query_3862   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCACCTGCAAGGCTTCTGGTTACCCCTTTAGCACCTAC  91
V  93.8% (272/290)  IGHV1-18*04  7    ......................................................T....................A......C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  H  G  L  E  W  L  G  W  I  S  G  H  N  G  N  T  K  N  A  Q 
                    Query_3862   92   GGTATCAGCTGGGTGCGGCAGGCCCCTGGACACGGGCTTGAGTGGCTGGGATGGATCAGCGGTCACAATGGCAACACAAAAAATGCACAG  181
V  93.8% (272/290)  IGHV1-18*04  97   .................A..............A............A...............C.T.......T........CT........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  D  R  V  T  M  T  T  D  T  S  T  T  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3862   182  AAGTTCCAGGACAGAGTCACCATGACCACAGACACATCCACGACCACAGCGTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  93.8% (272/290)  IGHV1-18*04  187  ...C......G................................G......C.......................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  D  F  Q  G  D  Y  S  D  F  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_3862   272  GTATATTATTGTGCGAGAGATTTCCAAGGCGACTACTCGGACTTCTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  350
V  93.8% (272/290)  IGHV1-18*04  277  ..G.....C...........-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
J  91.7% (44/48)    IGHJ4*02     1    -------------------------------......TT....A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_254469

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD7-27*01                                                                                           12.2    37    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGGCCAACCGCCTGGGCGTTAAC	ACTGGG	AC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGCCAACCGCCTGGGCGTTAACACTGGGACCTACTTTGACTCC	ARRANRLGVNTGTYFDS	292	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	71	3	0	95.9
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	106	8	0	93
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	294	276	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  G  S  G  D  T  F  P  
                    Query_3863   5    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGAGACACCTTTCCCG  94
V  93.9% (276/294)  IGHV5-51*01  2    ....G........G...................A...........................................T...G....A..A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      G  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  F  P  G  D  S  D  T  K  Y  
                    Query_3863   95   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAGGGCCTGGAGTGGATGGGGTTCATCTTTCCTGGTGACTCTGATACCAAATACA  184
V  93.9% (276/294)  IGHV5-51*01  92   .....................................A..................A......A....................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  A  F  Q  G  Q  V  T  F  S  A  D  K  S  I  G  T  A  Y  L  Q  W  S  R  L  K  A  S  D  
                    Query_3863   185  GCCCGGCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCGGCACCGCCTACCTGCAGTGGAGTAGGTTGAAGGCCTCGGACC  274
V  93.9% (276/294)  IGHV5-51*01  182  .....T....................A....................A......................C..CC..............A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      P  A  M  Y  Y  C  A  R  R  A  N  R  L  G  V  N  T  G  T  Y  F  D  S  W  G  Q  G  T  L  V  
                    Query_3863   275  CCGCCATGTATTACTGTGCGAGACGGGCCAACCGCCTGGGCGTTAACACTGGGACCTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCT  364
V  93.9% (276/294)  IGHV5-51*01  272  ........................------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD7-27*01  4    -----------------------------------------------......-------------------------------------  9
J  95.7% (45/47)    IGHJ4*02     2    -------------------------------------------------------...........A......................A  36

                                                  
                                      S  V  S  S  
                    Query_3863   365  CCGTCTCCTCAG  376
J  95.7% (45/47)    IGHJ4*02     37   ............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_100516

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         352     3e-99
IGHD4-17*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCCCAA	TACGCTGACTAC	GAAGACAACCTGGCTTTG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCCAATACGCTGACTACGAAGACAACCTGGCTTTGTACGGTATGGACGTC	ARDSQYADYEDNLALYGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	56	27	27	0	0	100
FR2-IMGT	57	107	51	51	0	0	100
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	247	236	11	0	95.5


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  R  L  S  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  
                    Query_3864     4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTTACTCCATCAGCAGTGGTTACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTGG  93
V  95.5% (236/247)  IGHV4-38-2*02  50   .....TCC...A.....A........................................................................  139
                                           L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  G  S  I  Y  H  S  G  S  T  H  Y  T  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  
                    Query_3864     94   AGTGGATTGGGAGTATCTATCATAGTGGGAGCACACACTACACCCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGA  183
V  95.5% (236/247)  IGHV4-38-2*02  140  ..................................CT......A...............................................  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><-------------------------CDR3-
                                        N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  Q  Y  A  D  Y  E  
                    Query_3864     184  ACCAGTTCTCCCTGAACCTGAATTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGATTCCCAATACGCTGACTACGAAG  273
V  95.5% (236/247)  IGHV4-38-2*02  230  ................G....GC............................................-----------------------  296
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                          
D  91.7% (11/12)    IGHD4-17*01    5    --------------------------------------------------------------------------....G.......----  16

                                        IMGT------------------------>                                 
                                        D  N  L  A  L  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3864     274  ACAACCTGGCTTTGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
J  100.0% (48/48)   IGHJ6*02       15   --------------................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_100517

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATTTGCTGA	TTCGGGGA	TTGAAAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGTC	AKFADSGIETYGMDV	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	109	5	0	95.6
CDR3-IMGT (germline)	292	295	4	4	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  
                    Query_3865   5    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTATCA  94
V  95.2% (277/291)  IGHV5-51*01  2    ..G...................................................................T................C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  F  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  C  L  G  I  I  D  P  R  D  S  D  T  T  Y  
                    Query_3865   95   GCTTCTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGCTTGGGGATCATCGATCCTCGTGACTCTGATACCACATACA  184
V  95.2% (277/291)  IGHV5-51*01  92   ...A........G....................................GA...........T.....G...............G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  L  S  F  Q  G  Q  V  T  I  S  V  D  K  S  T  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_3865   185  GCCTGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  95.2% (277/291)  IGHV5-51*01  182  ...C.............................C...........T............................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  Y  C  A  K  F  A  D  S  G  I  E  T  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_3865   275  CCGCCATGTATTATTGTGCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCT  364
V  95.2% (277/291)  IGHV5-51*01  272  .............C.......---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (8/8)     IGHD3-10*01  13   -------------------------------........---------------------------------------------------  20
J  98.0% (48/49)    IGHJ6*02     14   ----------------------------------------------............................................  57

                                           
                                      S  S 
                    Query_3865   365  CTTCA  369
J  98.0% (48/49)    IGHJ6*02     58   .C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_100515

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_3866   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG....T..............A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3866   91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.4% (228/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_3866   181  CAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  ...............C...G...........................G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_3866   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_100512

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD2-21*01                                                                                           10.3    116  
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-21*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TA	GGTGA	AGCCCAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGTGAAGCCCAGTACTGGTACTTCGATCTC	ARVGEAQYWYFDL	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	232	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3867   1    ACCCTGTCCCTCACCTGCAGTGTTTCTGGTGACTCAATCAGTGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (232/244)  IGHV4-59*01  49   ...................C...C.......G...C......A...A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  T  S  E  N 
                    Query_3867   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTCGACACGTCCGAGAAC  180
V  95.1% (232/244)  IGHV4-59*01  139  .................................A.............................A..........A.........A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       K  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  G  E  A  Q  Y  W  Y  F 
                    Query_3867   181  AAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTAGGTGAAGCCCAGTACTGGTACTTC  270
V  95.1% (232/244)  IGHV4-59*01  229  C..................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*01  14   ------------------------------------------------------------------.....-------------------  18
J  100.0% (52/52)   IGHJ2*01     2    ------------------------------------------------------------------------------............  13

                                      ----->                                  
                                       D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3867   271  GATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  310
J  100.0% (52/52)   IGHJ2*01     14   ........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_178489

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           335     4e-94
IGHD3-16*02                                                                                           12.2    31   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTATCG	ACATTGGTTA	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTATTTGCCTAT	ARHYRHWLFAY	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  V  S  L  T  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_3868   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGTCTCCCTCACCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  92.8% (232/250)  IGHV4-39*01  50   .....TCC...A....C.............G....A...G..................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_3868   94   TGGAGTGGATTGGGAGTTTGTATTATAGTGGCAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCCA  183
V  92.8% (232/250)  IGHV4-39*01  140  .................A.C...........G...............................................A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  H  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  H  W  L  F  
                    Query_3868   184  AGAACCACTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACATTATCGACATTGGTTATTTG  273
V  92.8% (232/250)  IGHV4-39*01  230  .......G..C........G....G...T.......................G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*02  25   ----------------------------------------------------------------------......--------------  30
J  95.3% (41/43)    IGHJ4*02     6    --------------------------------------------------------------------------------------....  9

                                      ---->                                  
                                      A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3868   274  CCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  95.3% (41/43)    IGHJ4*02     10   A...C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_100510

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCTAGGAGATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCTAGGAGATCTTGACTAC	ASLGDLDY	238	261	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  S  R  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  Q 
                    Query_3869   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTCGTTACTTCTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGCAG  90
V  95.5% (231/242)  IGHV4-59*01  49   .................................T........A......A.....G...............................G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  T  S  Q  N 
                    Query_3869   91   TGGATTGGATATATCTCTTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTGGACACGTCCCAGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ........G.......A...C..........................................A..........A.........A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------CDR3-IMGT------>         
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  G  D  L  D  Y  W  G  Q 
                    Query_3869   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGTCTAGGAGATCTTGACTACTGGGGCCAG  270
V  95.5% (231/242)  IGHV4-59*01  229  ..............................................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------.................  23

                                                               
                                       G  T  L  V  T  V  S  S  
                    Query_3869   271  GGAACCCTGGTCACCGTCTCCTCAG  295
J  100.0% (42/42)   IGHJ4*02     24   .........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_100511

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           363     1e-102
IGHD1-26*01                                                                                           12.2    31    
IGHJ2*01                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATAAG	TACTAC	TTATAT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATATAAGTACTACTTATATCTGGTACTTCGATCTC	AKDISTTYIWYFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3870   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-23*01  47   .........................................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  T  G  S  G  T  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  S  
                    Query_3870   91   AGTGGGTCTCAACTATTACTGGTAGTGGTACTAACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACACTTCCA  180
V  96.4% (241/250)  IGHV3-23*01  137  ...........G......G..........GG..G..................................................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  D  I  S  T  T  Y  I  
                    Query_3870   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTGTATTACTGTGCGAAAGATATAAGTACTACTTATATCT  270
V  96.4% (241/250)  IGHV3-23*01  227  ....................................C...............A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-26*01  15   ----------------------------------------------------------------------------......--------  20
J  100.0% (50/50)   IGHJ2*01     4    ----------------------------------------------------------------------------------------..  5

                                      ------------->                                  
                                      W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3870   271  GGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  318
J  100.0% (50/50)   IGHJ2*01     6    ................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_175585

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           378     3e-107
IGHD3-3*01                                                                                            16.1    2.6   
IGHJ5*01                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAAACAGTCGGCCCACTGAGA	ATTATACC	CCCCCGTCGGGCGTTCTAG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAAACAGTCGGCCCACTGAGAATTATACCCCCCCGTCGGGCGTTCTAGGGTTCGACTCC	ARRNSRPTENYTPPSGVLGFDS	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_3871   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGTTA  90
V  91.7% (266/290)  IGHV5-51*01  6    .......................................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  W  R  Q  M  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_3871   91   CTGGATCGCTTGGTGGCGCCAGATGCCCGGGAAAGGCCTGGAATTAATGGGGATCATCTACCCTGGTGACTCTGATACTAGATACAATCC  180
V  91.7% (266/290)  IGHV5-51*01  96   ........GC...GT...........................G.GG..............T.................C.......GC..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  A  T  I  Y  A  D  K  S  I  S  T  A  Y  L  Q  I  S  S  L  K  A  S  D  T  A
                    Query_3871   181  GTCCTTCCAAGGTCAGGCCACCATTTATGCCGACAAGTCCATCAGCACCGCCTACCTGCAGATAAGCAGCCTGAAGGCCTCGGACACCGC  270
V  91.7% (266/290)  IGHV5-51*01  186  ............C....T......C.CA.................................TGG..........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------------CDR3-IMGT--------------------------->           
                                        K  Y  F  C  A  R  R  N  S  R  P  T  E  N  Y  T  P  P  S  G  V  L  G  F  D  S  W  G  Q  G
                    Query_3871   271  CAAATACTTCTGTGCGAGACGAAACAGTCGGCCCACTGAGAATTATACCCCCCCGTCGGGCGTTCTAGGGTTCGACTCCTGGGGCCAGGG  360
V  91.7% (266/290)  IGHV5-51*01  276  ..TG..T.A...........----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-3*01   24   -----------------------------------------........-----------------------------------------  31
J  97.8% (44/45)    IGHJ5*01     7    --------------------------------------------------------------------...................A..  28

                                                             
                                        T  L  V  T  V  S  S  
                    Query_3871   361  AACCCTGGTCACCGTCTCCTCAG  383
J  97.8% (44/45)    IGHJ5*01     29   .......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_100519

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         367     6e-104
IGHD3-9*01                                                                                            52.6    2e-11 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACTCCCCT	TTACGATATTTTGACTGGTTATTATAA	GGGGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACTCCCCTTTACGATATTTTGACTGGTTATTATAAGGGGAACTACTACTACGGTTTGGACGTC	ARTPLYDILTGYYKGNYYYGLDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	241	6	0	97.6


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  S  F  S  G  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3872     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTGGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.6% (241/247)  IGHV3-30-3*01  47   ....................................C.......A.............................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  S  V  I  S  Y  D  G  S  N  K  D  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_3872     91   AGTGGGTGTCAGTTATATCATATGATGGAAGCAATAAAGACTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  97.6% (241/247)  IGHV3-30-3*01  137  ........G.............................T..................A................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><---------------------------
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  T  P  L  Y  D  I  L  
                    Query_3872     181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTTGAGGACACGGCTGTGTATTACTGTGCGAGGACTCCCCTTTACGATATTTTGA  270
V  97.6% (241/247)  IGHV3-30-3*01  227  ....................................C..............................-----------------------  293
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (27/27)   IGHD3-9*01     4    ----------------------------------------------------------------------------..............  17

                                        --CDR3-IMGT----------------------------->                                 
                                        T  G  Y  Y  K  G  N  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3872     271  CTGGTTATTATAAGGGGAACTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTTTCCTCA  344
D  100.0% (27/27)   IGHD3-9*01     18   .............-------------------------------------------------------------  30
J  96.4% (54/56)    IGHJ6*02       7    ------------------..............A..................................C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_33838

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           335     4e-94
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	CCCCTCCAAGACCAA	TACGGTGACTAC	GCATATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGACCCCTCCAAGACCAATACGGTGACTACGCATATAACTAC	ARPLQDQYGDYAYNY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  E  F  T  F  S  V  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3873   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGAATTCACCTTCAGTGTCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  93.1% (231/248)  IGHV3-74*01  47   ..............................G.............AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  R  I  S  F  D  G  S  D  T  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_3873   91   AGTGGATCTCACGTATTAGTTTTGATGGGAGTGACACAAACTACGCGGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  93.1% (231/248)  IGHV3-74*01  137  T....G............A.AG..........AG.....G...............................A..................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  L  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  L  Q  D  Q  Y  G  
                    Query_3873   181  AGAATACGCTGTATTTACTAATGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGACCCCTCCAAGACCAATACGGTG  270
V  93.1% (231/248)  IGHV3-74*01  227  ....C.........C.G.A.................................G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD4-17*01  5    -----------------------------------------------------------------------------------.......  11

                                      ---------------->                                  
                                      D  Y  A  Y  N  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_3873   271  ACTACGCATATAACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  321
D  100.0% (12/12)   IGHD4-17*01  12   .....----------------------------------------------  16
J  97.4% (38/39)    IGHJ4*02     10   ------------.................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_175587

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     3e-93
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	T	AGTGGCTGG	GACCACGTCTCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAGTGGCTGGGACCACGTCTCT	AKDSGWDHVS	249	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	21	3	6	70
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	236	14	6	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3874   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACATTTAACACCTATGGCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.2% (236/256)  IGHV3-23*01  47   ............................T........C....G..G.....C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  S  G  I  S  S  S  D  G  G  G  R  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  
                    Query_3874   91   AGTGGGTCTCAGGTATCAGTAGTAGTGATGGTGGTGGTCGCACAGACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACA  180
V  92.2% (236/256)  IGHV3-23*01  137  ............C...T...G......------.....A.....T.............................................  220
                                      E  W  V  S  A  I  S  G  S        G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--
                                      I  A  K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  S  G  W  D  
                    Query_3874   181  TTGCCAAGAACACACTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAAAGATAGTGGCTGGGACC  270
V  92.2% (236/256)  IGHV3-23*01  221  A.T..........G................................G.............................--------------  296
                                      N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                 
D  100.0% (9/9)     IGHD6-19*01  10   -----------------------------------------------------------------------------.........----  18

                                      ------->                                  
                                      H  V  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3874   271  ACGTCTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (34/34)   IGHJ4*02     15   --------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_191803

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           341     5e-96
IGHD2-2*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCTAAATGGATTCTCG	ATTGTGCTACTACCGGTTGCTAT	CTG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCTAAATGGATTCTCGATTGTGCTACTACCGGTTGCTATCTGGACTAC	ARDPKWILDCATTGCYLDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  V  S  G  F  P  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_3875   1    GGTCCCTGAGACTCTCCTGTTCAGTCTCTGGATTCCCCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-11*01  47   ....................G...C..........A......................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  K  I  T  P  S  G  S  A  I  D  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_3875   91   AGTGGGTTTCAAAGATCACTCCTAGTGGCAGTGCCATAGACTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  93.6% (234/250)  IGHV3-11*01  137  ...........T.C..T.G.AG......T...A.....T..................A................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  L  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  P  K  W  I  L  D  
                    Query_3875   181  AGAACTTACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATATTACTGTGCGAGAGACCCTAAATGGATTCTCGATT  270
V  93.6% (234/250)  IGHV3-11*01  227  ......C...........................................G.G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  78.3% (18/23)    IGHD2-2*01   6    ---------------------------------------------------------------------------------------...  8

                                      -IMGT----------------------->                                  
                                      C  A  T  T  G  C  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3875   271  GTGCTACTACCGGTTGCTATCTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  78.3% (18/23)    IGHD2-2*01   9    ..AG..G....A.C......-------------------------------------------  28
J  100.0% (40/40)   IGHJ4*02     9    -----------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_351927

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           339     2e-95
IGHD5-18*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTCAAGC	GTGGATACAGCT	TAG	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTCAAGCGTGGATACAGCTTAGATTACTACTTCTATTACGGTATGGACGTC	ARLKRGYSLDYYFYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  T  Y  V  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3876   1    GGTCCCTGAGACTCTCCTGTGTAGCGTCTGGATTCACCTTCAGTACCTATGTCATGCACTGGGTCCGCCAGGCTCCAGGTAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-33*01  47   .....................C.......................G.....G...........................C..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  T  A  I  W  H  D  G  T  N  K  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_3876   91   AGTGGGTGACAGCTATATGGCATGATGGAACTAATAAATACTATGCAGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.9% (232/247)  IGHV3-33*01  137  ........G...T.......T.........G.........................A.................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      R  N  T  L  Y  L  Q  M  S  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  L  K  R  G  Y  S  L  
                    Query_3876   181  GGAACACTCTGTATCTGCAAATGAGTAGCCTGAGAGTCGAGGACACGGCTGTGTATTATTGTGCGAGGCTCAAGCGTGGATACAGCTTAG  270
V  93.9% (232/247)  IGHV3-33*01  227  A......G................AC..........C.....................C........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (12/12)   IGHD5-18*01  1    ---------------------------------------------------------------------------............---  12

                                      -IMGT----------------------->                                 
                                      D  Y  Y  F  Y  Y  G  M  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_3876   271  ATTACTACTTCTATTACGGTATGGACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  332
J  95.2% (59/62)    IGHJ6*02     1    .........A...C......................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_351926

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3877   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3877   91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*01  139  ........GT........T.......G...............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_3877   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.5% (234/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3877   271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_33833

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           358     4e-101
IGHD3-16*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CACTCAATCGAGGACTCCG	TGCTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACTCAATCGAGGACTCCGTGCTTATTACTTTGATCAT	ATLNRGLRAYYFDH	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	258	29	0	89.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  R  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  A  T  H
                    Query_3878   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGAGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACAGTTTTGCCACACA  90
V  89.9% (258/287)  IGHV5-51*03  6    ..............................A......G............................T...........C...A...GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  T  D  S  E  T  H  Y  S  P
                    Query_3878   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTACTGACTCTGAAACCCACTACAGCCC  180
V  89.9% (258/287)  IGHV5-51*03  96   ............................................................T...GG.........T...AGA........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  R  S  I  T  T  A  Y  L  Q  W  N  T  L  G  A  S  D  P  A
                    Query_3878   181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACAGATCCATCACTACCGCCTACCTGCAGTGGAACACATTGGGGGCCTCGGACCCCGC  270
V  89.9% (258/287)  IGHV5-51*03  186  ........A..........................AG.......GC...................G..GCC..AA..........A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  T  L  N  R  G  L  R  A  Y  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3878   271  CATATATTACTGCGCGACACTCAATCGAGGACTCCGTGCTTATTACTTTGATCATTGGGGCCAGGGAACCCTGGTCACAGTCTCCTCAG  359
V  89.9% (258/287)  IGHV5-51*03  276  ...G........T....------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                          
D  100.0% (7/7)     IGHD3-16*01  28   ------------------------------------.......----------------------------------------------  34
J  91.3% (42/46)    IGHJ4*02     3    -------------------------------------------........CT.C.......................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_351924

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            372     2e-105
IGHD3-10*01                                                                                           12.2    32    
IGHJ3*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCC	GGGAGT	GTGTGGGGGGGCC	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGCCGGGAGTGTGTGGGGGGGCCATGGTTTTGATATC	ARDAGSVWGGHGFDI	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	243	5	0	98


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  S  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_3879   1    ACCCTGTCCCTCACCTGCGCTGTCTCTAGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  98.0% (243/248)  IGHV4-4*02   49   ...........................G..............................................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  K  S  G 
                    Query_3879   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACAAGTCCGGG  180
V  98.0% (243/248)  IGHV4-4*02   139  .......................................................................A...............AA.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  D  A  G  S  V  W  G  G 
                    Query_3879   181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCATGTATTACTGTGCGAGAGATGCCGGGAGTGTGTGGGGGGGC  270
V  98.0% (243/248)  IGHV4-4*02   229  ................................................G...................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  17   ------------------------------------------------------------------------......------------  22

                                      -------------->                                  
                                       H  G  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3879   271  CATGGTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  319
J  97.9% (47/48)    IGHJ3*02     3    -...C............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_33835

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD2-8*02                                                                                            14.1    9.5   
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGT	TACTGGT	ACCAACGCCAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTC	ARLVTGTNATYGLDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_3880   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAGCTA  90
V  97.6% (282/289)  IGHV5-51*03  6    .................................................................G........................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  T  G  L  E  R  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_3880   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGAGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  97.6% (282/289)  IGHV5-51*03  96   ........G.......................A..........T..............................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  A  I  S  A  D  R  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3880   181  GTCCTTCCAAGGCCAGGTCGCCATCTCAGCCGACAGGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  ...................A...............A.........C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  L  V  T  G  T  N  A  T  Y  G  L  D  V  W  G  Q  G  S  K  V  T  V  S  S
                    Query_3880   271  CATGTATTACTGTGCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTCTGGGGCCAAGGGAGCAAGGTCACCGTCTCCTC  360
V  97.6% (282/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-8*02   10   ------------------------.......-----------------------------------------------------------  16
J  93.9% (46/49)    IGHJ6*02     14   ------------------------------------------.......A.....................C..C...............  61

                                       
                                       
                    Query_3880   361  A  361
J  93.9% (46/49)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_351922

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           344     6e-97
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGCG	GGCTGG	G	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCTGGGAACTGGTTCGACCCC	ARGRRAGNWFDP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3881   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTGGGGCTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.0% (235/250)  IGHV4-31*03  49   .........................................C.....T.G............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  E  N  T  Q  Y  N  P  S  L  K  S  R  L  T  I  S  G  D  T  S 
                    Query_3881   91   CTGGAGTGGATTGGATACATCTATTACGGTGAGAACACCCAGTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGGAGACACGTCT  180
V  94.0% (235/250)  IGHV4-31*03  139  ..............G............A...G..G....T.C........................G............T..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       T  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  W 
                    Query_3881   181  ACGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCTGGGAACTGG  270
V  94.0% (235/250)  IGHV4-31*03  229  .A.................A.................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------......-------  18
J  98.0% (48/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  T  S  
                    Query_3881   271  TTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCACCTCAG  313
J  98.0% (48/49)    IGHJ5*02     9    ....................................T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_351921

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            330     1e-92
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	227	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_3882   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGCTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  93.4% (227/243)  IGHV4-4*02   49   ...................C........................T..T...........T............C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  G  R  V  T  M  S  V  D  R  S  E 
                    Query_3882   91   GAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGGGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  93.4% (227/243)  IGHV4-4*02   139  ...................A..A..............A................A..A.............A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_3882   181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  93.4% (227/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3882   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_351920

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           327     9e-92
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCCCCCTCCTGTG	GGTGACTAC	GTCAGCGGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCCCCCTCCTGTGGGTGACTACGTCAGCGGCCTTGACTAT	AKPPPVGDYVSGLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	228	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  T  T  S  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3883   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCATGTTCACCACCTCTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.3% (228/247)  IGHV3-30*18  47   ......................A.............CC....GT.G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3883   91   AGTGGGTGGCAGTCATCTCATATGATGGAAGTAATACGTACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGGGACAATTCCA  180
V  92.3% (228/247)  IGHV3-30*18  137  .............T..A...................AA.....T...................................A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  S  L  Q  M  S  S  L  R  P  E  D  S  G  V  Y  Y  C  A  K  P  P  P  V  G  D  Y  
                    Query_3883   181  AGAACACCCTGTCTCTGCAAATGAGCAGCCTGAGACCTGAGGACTCGGGTGTGTATTACTGTGCGAAGCCCCCTCCTGTGGGTGACTACG  270
V  92.3% (228/247)  IGHV3-30*18  227  .......G....A...........A..........G........A...C..................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD4-17*01  8    --------------------------------------------------------------------------------.........-  16

                                      ---------------->                                  
                                      V  S  G  L  D  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_3883   271  TCAGCGGCCTTGACTATTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  321
J  95.2% (40/42)    IGHJ4*02     7    ---------.......C................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_178484

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           411     4e-117
IGHD7-27*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	TCTGGGA	AACTGGGG	TAGGA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATCTGGGAAACTGGGGTAGGAGACTAC	AIWETGVGDY	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	275	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  R  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  R  S  Y
                    Query_3884   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGGAGCTA  90
V  95.8% (275/287)  IGHV1-69*01  6    ..................G.............A...................................................C.....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  G  I  I  P  L  F  R  T  P  N  Y  A  Q
                    Query_3884   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGAGGGATCATCCCTCTCTTTCGGACACCAAACTACGCACA  180
V  95.8% (275/287)  IGHV1-69*01  96   ..............................................A.................A.....G.T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  Q  L  S  S  L  R  S  E  D  T  A
                    Query_3884   181  GAAGTTCCAGGACAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGCAACTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.8% (275/287)  IGHV1-69*01  186  ...........G..............................................G.G.............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        V  Y  Y  C  A  I  W  E  T  G  V  G  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_3884   271  CGTATATTACTGTGCGATCTGGGAAACTGGGGTAGGAGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  347
V  95.8% (275/287)  IGHV1-69*01  276  ...G.............------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                              
D  100.0% (8/8)     IGHD7-27*01  3    ------------------------........---------------------------------------------  10
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------...........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_28674

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            357     1e-100
IGHD2-2*01                                                                                            33.4    1e-05 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CT	TATTGTAGTAGTAGCATCTGCTA	CCA	TGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTTATTGTAGTAGTAGCATCTGCTACCATGACCAC	ATYCSSSICYHDH	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	237	9	0	96.3


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  V  T  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3885  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAGTCACCTTTAGTACCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.3% (237/246)  IGHV3-7*01  47   ................................T............G............................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  H  D  G  S  E  K  Y  Y  A  D  S  V  K  G  R  F  A  I  S  R  D  N  A  
                    Query_3885  91   AGTGGGTGGCCAACATAAAGCACGATGGAAGTGAGAAATACTATGCGGACTCTGTGAAGGGCCGATTCGCCATCTCCAGAGACAACGCCA  180
V  96.3% (237/246)  IGHV3-7*01  137  ......................A......................T......................A.....................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                     K  N  S  L  F  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  Y  C  S  S  S  I  C  
                    Query_3885  181  AGAACTCACTGTTTCTGCAAATGAGTAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGACTTATTGTAGTAGTAGCATCTGCT  270
V  96.3% (237/246)  IGHV3-7*01  227  ............A...........AC..........................G.............------------------------  292
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  91.3% (21/23)    IGHD2-2*01  5    --------------------------------------------------------------------.............C..G.....  26

                                     ---------->                                  
                                     Y  H  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3885  271  ACCATGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
D  91.3% (21/23)    IGHD2-2*01  27   .--------------------------------------------  27
J  97.6% (40/41)    IGHJ4*02    8    ----....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_35095

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	73	1	0	98.6
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	111	3	0	97.4
CDR3-IMGT (germline)	289	296	8	7	1	0	87.5
Total	N/A	N/A	295	282	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  
                    Query_3886   2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTTCCA  91
V  95.6% (282/295)  IGHV5-51*01  2    ..G...............................................................................C...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  
                    Query_3886   92   CTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACA  181
V  95.6% (282/295)  IGHV5-51*01  92   GC..C.......G.................................................T.................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_3886   182  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  95.6% (282/295)  IGHV5-51*01  182  ...........C.....................C........................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  
                    Query_3886   272  CCGCCATCTATTACTGTGCAAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  361
V  95.6% (282/295)  IGHV5-51*01  272  .......G...........G.....-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  85.7% (12/14)    IGHD1-26*01  4    ---------------------------------...G....A.....-------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------------......TA................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_3886   362  CGGTCACCGTCTCGTCA  378
J  94.7% (54/57)    IGHJ6*02     46   .............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_267783

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3887   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  96.4% (239/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3887   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  96.4% (239/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_3887   181  AAGAACCAGTTCTCCCTGAGGCTCAGCTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  96.4% (239/248)  IGHV4-31*03  229  ...................A...G................................T...........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  98.0% (50/51)    IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_3887   271  GACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  310
J  98.0% (50/51)    IGHJ5*02     12   ..................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_191804

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         316     2e-88
IGHD3-3*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTAATCTT	TTACGATTTTTCGACTGGCTAT	CGTCGAAA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCTTAATCTTTTACGATTTTTCGACTGGCTATCGTCGAAAGGTATGGACGTC	VRDLNLLRFFDWLSSKGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3888     1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACGTTTAGTAACTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-30-3*01  47   .....................C...............C..C....G......T.....................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  S  V  I  S  Y  D  G  T  T  K  Y  Y  A  S  S  V  K  G  R  F  T  N  S  R  D  N  S  
                    Query_3888     91   AGTGGGTGTCAGTAATTTCATATGATGGAACCACTAAGTACTACGCAAGCTCCGTGAAGGGCCGATTCACCAACTCCAGAGACAATTCCA  180
V  90.4% (226/250)  IGHV3-30-3*01  137  ........G....T..A.............G..A...A.........GA.......................T.................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------------CD
                                        K  N  T  L  Y  L  Q  V  S  S  L  T  P  E  D  T  A  V  Y  F  C  V  R  D  L  N  L  L  R  F  
                    Query_3888     181  AGAATACCCTGTATCTGCAAGTGAGCAGCCTGACACCCGAGGACACGGCTGTGTACTTCTGTGTGAGAGATCTTAATCTTTTACGATTTT  270
V  90.4% (226/250)  IGHV3-30-3*01  227  ....C..G............A...A........G.G.T.................T.A.....C......--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.4% (19/22)    IGHD3-3*01     4    --------------------------------------------------------------------------------..........  13

                                        R3-IMGT------------------------>                                 
                                        F  D  W  L  S  S  K  G  M  D  V  W  G  Q  G  T  A  V  I  V  S  S 
                    Query_3888     271  TCGACTGGCTATCGTCGAAAGGTATGGACGTCTGGGGCCAAGGGACCGCAGTCATCGTCTCCTCA  335
D  86.4% (19/22)    IGHD3-3*01     14   .G..G...T...-----------------------------------------------------  25
J  93.3% (42/45)    IGHJ6*02       18   --------------------...........................A.G....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_124659

Length=420
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           394     7e-112
IGHD3-3*01                                                                                            46.8    1e-09 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGAGCTTGAC	TTACGATTTTTGGAGTGGTTATTA	CCCGACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGAGCTTGACTTACGATTTTTGGAGTGGTTATTACCCGACCCCTACTACTACGCTATGGACGTC	ARGELDLRFLEWLLPDPYYYAMDV	291	362	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	73	1	0	98.6
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	19	5	0	79.2
FR3-IMGT	177	290	114	105	9	0	92.1
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	294	273	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  
                    Query_3889   4    AGGTCCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTTCCA  93
V  92.9% (273/294)  IGHV1-18*04  2    ....T.................................................................................A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  H  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  K  K  S  I  T  K  Y  
                    Query_3889   94   CTCACGGTATTAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGCTAAGAAAAGTATCACAAAGTATG  183
V  92.9% (273/294)  IGHV1-18*04  92   GCT.......C.............................G...........................T.C..TG...A......C....  181
                                      S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  K  F  R  D  R  V  T  M  T  T  D  T  S  T  T  T  V  Y  M  E  L  R  S  L  R  S  D  D  
                    Query_3889   184  CACAGAAGTTCCGAGACAGAGTCACCATGACCACAGACACATCCACGACCACAGTCTACATGGAACTGAGGAGCCTGAGATCTGACGACG  273
V  92.9% (273/294)  IGHV1-18*04  182  ........C...AG.G................................G.....C.........G........................A  271
                                      A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  

                                      ----------------><-------------------------------CDR3-IMGT------------------------------> 
                                      A  A  V  Y  Y  C  A  R  G  E  L  D  L  R  F  L  E  W  L  L  P  D  P  Y  Y  Y  A  M  D  V  
                    Query_3889   274  CGGCCGTGTATTACTGTGCGAGAGGGGAGCTTGACTTACGATTTTTGGAGTGGTTATTACCCGACCCCTACTACTACGCTATGGACGTCT  363
V  92.9% (273/294)  IGHV1-18*04  272  ........................------------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                    
D  100.0% (24/24)   IGHD3-3*01   4    -----------------------------------........................-------------------------------  27
J  98.2% (54/55)    IGHJ6*02     8    -------------------------------------------------------------------...........G...........  30

                                                                      
                                      W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3889   364  GGGGCCAAGGGACCACGGTCACCGTCTCCTCA  395
J  98.2% (54/55)    IGHJ6*02     31   ................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41235264


Query= Query_124658

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         341     5e-96
IGHD3-16*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	GGGGGAGT	GCGGGTATTCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGGGGAGTGCGGGTATTCCTCTAC	AREGGVRVFLY	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  V  R  Q  P  P  G  K  G  L 
                    Query_3890     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCTATTAGCAGTGGTTATTACTGGGGCTGGGTCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  94.0% (233/248)  IGHV4-38-2*02  49   ..................A................C..C...........C............A..........................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  V  Y  H  S  G  S  T  F  Y  S  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K 
                    Query_3890     91   GAGTGGATTGGGAGTGTCTATCATAGTGGGAGCACCTTCTACAGCCCGTCCCTCAAGAGCCGAGTCAGCATTTCAGTAGACACGTCCAAG  180
V  94.0% (233/248)  IGHV4-38-2*02  139  ...............A.....................A.....A...............T.......C...A..................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                         N  Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  V  R  V  F  L 
                    Query_3890     181  AACCAGTTCTCCCTGAAGGTTAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGAAGGGGGAGTGCGGGTATTCCTC  270
V  94.0% (233/248)  IGHV4-38-2*02  229  ..................C.G..C................................C...........----------------------  296
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD3-16*01    18   ---------------------------------------------------------------------........-------------  25
J  100.0% (38/38)   IGHJ4*02       11   -----------------------------------------------------------------------------------------.  11

                                        -->                                  
                                         Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3890     271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (38/38)   IGHJ4*02       12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_16899

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            355     3e-100
IGHD6-19*01                                                                                           27.6    7e-04 
IGHJ3*01                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCATAC	AGCAGTGGCTGGTA	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCATACAGCAGTGGCTGGTATGATGCTTTTGACTTC	ARAYSSGWYDAFDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3891   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCCTTTAGTTCGTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (237/247)  IGHV3-7*01   47   ...................................A........AGC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  Q  D  A  S  A  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3891   91   AGTGGGTGGCCAACATAAACCAAGATGCAAGTGCGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (237/247)  IGHV3-7*01   137  ...................G.......G.....A........................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  Y  S  S  G  W  Y  
                    Query_3891   181  AGAACTCACTGTTTTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCAGTGTATTACTGTGCGAGGGCATACAGCAGTGGCTGGTATG  270
V  96.0% (237/247)  IGHV3-7*01   227  ............A.C..................................T.................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (14/14)   IGHD6-19*01  7    --------------------------------------------------------------------------..............--  20
J  92.0% (46/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------------..  2

                                      ------------->                                  
                                      D  A  F  D  F  W  G  P  G  T  M  V  T  V  S  S  
                    Query_3891   271  ATGCTTTTGACTTCTGGGGCCCAGGGACGATGGTCACCGTCTCTTCAG  318
J  92.0% (46/50)    IGHJ3*01     3    ..........TG.........A......A...................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_16896

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           352     3e-99
IGHD3-3*01                                                                                            14.1    8.2  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	113	1	0	99.1
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	236	11	0	95.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_3892   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGCC  93
V  95.5% (236/247)  IGHV4-31*02  50   .....TCC...A.....................C......C.............................C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  N  T  S  
                    Query_3892   94   TGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAAACACGTCTA  183
V  95.5% (236/247)  IGHV4-31*02  140  ....G.........T.C...............................................................G.........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  
                    Query_3892   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCG  273
V  95.5% (236/247)  IGHV4-31*02  230  ...................................................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  100.0% (51/51)   IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3892   274  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (51/51)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_16897

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-16*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCT	TTACGTTTGGGGGAGCTATG	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTTTACGTTTGGGGGAGCTATGGACTACTTTGACTAC	ARGLFTFGGAMDYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  A  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_3893   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCGCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ...............................G.T..........................................A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  S  T  Y  S  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3893   91   CTGGAGTGGATTGGGTACATCTATTACCGTGGGAGCACGTACTCCAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ...........................A..........C....A..............................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  L  S  V  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  F  T  F  G  G 
                    Query_3893   181  AAGAACCAGTTGTCCGTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTATTGTGCGAGAGGCCTCTTTACGTTTGGGGGA  270
V  96.4% (241/250)  IGHV4-31*03  229  ...........C...C...........................................C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-16*01  10   ----------------------------------------------------------------------------..............  23

                                      GT------------------>                                  
                                       A  M  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3893   271  GCTATGGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  95.0% (19/20)    IGHD3-16*01  24   .T....-------------------------------------------------  29
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_16895

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           363     1e-102
IGHD6-19*01                                                                                           21.8    0.040 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCAGG	GCAGTGGCTGG	CACG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTC	ARVPGQWLARGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3894   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (239/246)  IGHV3-53*01  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  M  Y  S  G  G  T  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_3894   91   AGTGGGTCTCAGTTATGTATAGCGGTGGGACCACATACTACGCAGAGTCCGTGAAGGGCCGATTCACCATCTCAAGAGACAATTCCAAGA  180
V  97.2% (239/246)  IGHV3-53*01  137  ................T...........T.G...............C..........................C................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  G  Q  W  L  A  R  
                    Query_3894   181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGTCCCAGGGCAGTGGCTGGCACGCG  270
V  97.2% (239/246)  IGHV3-53*01  227  ..................................................................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD6-19*01  8    -------------------------------------------------------------------------...........------  18
J  100.0% (46/46)   IGHJ6*02     17   ----------------------------------------------------------------------------------------..  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3894   271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (46/46)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_16892

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           310     1e-86
IGHD3-10*01                                                                                           41.1    7e-08
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAC	TATTATTATGGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTATTATTATGGTTCGGGGAGTTATTTTGACTTC	ARGHYYYGSGSYFDF	250	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	33	33	27	0	6	81.8
CDR1-IMGT	34	63	30	26	4	0	86.7
FR2-IMGT	64	114	51	45	6	0	88.2
CDR2-IMGT	115	135	21	21	0	0	100
FR3-IMGT	136	249	114	103	11	0	90.4
CDR3-IMGT (germline)	250	256	7	7	0	0	100
Total	N/A	N/A	256	229	21	6	89.5


Alignments

                                      <-----------FR1-IMGT------------><----------CDR1-IMGT---------><--------------------FR2-IM
                                       T  L  S  L  T  C  T  V  T  F  S  R  G  S  I  S  S  G  G  S  Y  L  D  W  V  R  Q  H  P  G 
                    Query_3895   1    ACCCTGTCCCTCACCTGCACTGTCACTTTCTCTCGTGGCTCCATTAGCAGTGGCGGTTCCTACTTGGACTGGGTCCGCCAGCACCCCGGG  90
V  89.5% (229/256)  IGHV4-31*03  49   ........................------...G..........C........T....A.....G.AG....A.............A...  132
                                       T  L  S  L  T  C  T  V        S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  G  L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  V  D 
                    Query_3895   91   AAGGGCCTGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCCGGAGTCGACTTACCATATCAGTGGAC  180
V  89.5% (229/256)  IGHV4-31*03  133  .....................T.........................................AA.......G.............A...  222
                                       K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-----------------CDR
                                       T  S  K  N  Q  L  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  Y  Y  Y 
                    Query_3895   181  ACGTCTAAGAATCAATTGTCCCTGAGGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTATTGTGCGAGAGGCCACTATTATTAT  270
V  89.5% (229/256)  IGHV4-31*03  223  ...........C..G..C.......A......C..........................G.....C..........--------------  298
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  95.8% (23/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------------.....C...  10

                                      3-IMGT----------------->                                  
                                       G  S  G  S  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3895   271  GGTTCGGGGAGTTATTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.8% (23/24)    IGHD3-10*01  11   ...............-------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_16890

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           388     4e-110
IGHD3-10*01                                                                                           18.0    0.59  
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTAT	CAATTAGACT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATCAATTAGACTACTACTTTGACTAC	ARGLYYYQLDYYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	249	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3896   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  99.6% (249/250)  IGHV4-31*03  49   .........................................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3896   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  99.6% (249/250)  IGHV4-31*03  139  ..........................................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  Q  L 
                    Query_3896   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCTCTATTACTATCAATTA  270
V  99.6% (249/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-10*01  2    ---------------------------------------------------------------------------.........------  10

                                      ----------------->                                  
                                       D  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3896   271  GACTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  100.0% (48/48)   IGHJ4*02     1    ----................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_16891

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            383     1e-108
IGHD1-26*01                                                                                           12.2    36    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	99	15	0	86.8
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	270	25	0	91.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_3897   1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACC  90
V  91.5% (270/295)  IGHV1-8*01   1    .......................G...............................................T........C.........  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F 
                    Query_3897   91   ACTTATGATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTT  180
V  91.5% (270/295)  IGHV1-8*01   91   .G....................................A..G..............A..............C.G...T..........A.  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D 
                    Query_3897   181  GCACAGAGATTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGAC  270
V  91.5% (270/295)  IGHV1-8*01   181  .......AG...C............................C.....A.................GC............G..C..AG...  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                 
                                       T  A  I  Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_3897   271  ACGGCCATATACTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  357
V  91.5% (270/295)  IGHV1-8*01   271  ......G.G..T.............--------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   ----------------------------------...G.....--------------------------------------------  18
J  100.0% (40/40)   IGHJ5*02     11   -----------------------------------------------........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_250611

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     3e-115
IGHD6-25*01                                                                                           14.1    9.4   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAGG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTC	ARQSSAGRTRYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  D  Y
                    Query_3898   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATTCGACTTTACCGACTA  90
V  94.5% (275/291)  IGHV5-51*01  6    ....................................C.............................T.......A.AG.......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_3898   91   CTGGATCGTCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACGAGATACAGTCC  180
V  94.5% (275/291)  IGHV5-51*01  96   ........G..............T......................................................C........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_3898   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (275/291)  IGHV5-51*01  186  .............................C.............A.......................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  F  C  A  R  Q  S  S  A  G  R  T  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_3898   271  CATGTATTTTTGTGCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTC  360
V  94.5% (275/291)  IGHV5-51*01  276  ........AC...........---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------............................................C..  61

                                       
                                       
                    Query_3898   361  A  361
J  97.9% (47/48)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_250610

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           282     4e-78
IGHD3-16*01                                                                                           18.0    0.60 
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACAACG	TATGCTTAT	GTCAGTGCTTGGGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAACGTATGCTTATGTCAGTGCTTGGGGATGATGCTTTTGATGTC	ARRQRMLMSVLGDDAFDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  V  T  T  T  R  Y  S  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_3899   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCGTCACCACTACTAGATACTCCTGGGGTTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  86.0% (215/250)  IGHV4-39*01  49   ...............................G....A...G..G..G...T....A......C..........................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Q  M  F  Y  G  G  S  T  Y  Q  N  P  S  L  N  S  R  V  T  V  S  V  D  P  S 
                    Query_3899   91   CTGGAATGGATTGGGCAGATGTTCTATGGTGGGAGCACGTACCAGAACCCGTCGCTGAATAGTCGAGTCACCGTGTCCGTTGACCCGTCC  180
V  86.0% (215/250)  IGHV4-39*01  139  .....G.........AGT..C.AT...A..........C...T.C........C..C..G............A.A.....A...A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  S  Q  F  F  L  N  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  R  Q  R  M  L  M  S 
                    Query_3899   181  AAGAGTCAGTTCTTCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCTGTATATTATTGTGCGAGACGACAACGTATGCTTATGTCA  270
V  86.0% (215/250)  IGHV4-39*01  229  ....AC.......C......G....G...................A.......G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  26   -----------------------------------------------------------------------------.........----  34

                                      -IMGT--------------------->                                  
                                       V  L  G  D  D  A  F  D  V  W  G  Q  G  T  G  V  T  V  S  S  
                    Query_3899   271  GTGCTTGGGGATGATGCTTTTGATGTCTGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  331
J  96.0% (48/50)    IGHJ3*01     1    -----------...............................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_250613

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           377     1e-106
IGHD1-26*01                                                                                           14.1    9.6   
IGHJ3*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCTCTTAC	TGGGGGATACTAC	TGGAC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCTCTTACTGGGGGATACTACTGGACATGCTTTTGATATC	ARDLLLGDTTGHAFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	266	25	0	91.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  I  I  T  Y
                    Query_3900   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGGCACCATAATCACCTA  90
V  91.4% (266/291)  IGHV1-69*01  6    ..................G...............................................T............T.C.G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  Q  A  P  G  Q  G  F  E  W  M  G  G  I  I  P  I  F  R  S  P  N  Y  A  Q
                    Query_3900   91   TGGTATCAGCTGGGTGCGCCAGGCCCCTGGGCAAGGGTTTGAGTGGATGGGAGGGATCATCCCTATTTTTCGTTCACCAAACTACGCACA  180
V  91.4% (266/291)  IGHV1-69*01  96   ..C...............A...........A......C............................C...G..A..G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  E  E  S  T  N  T  V  S  L  E  L  S  S  L  R  S  E  D  T  A
                    Query_3900   181  GAAGTTCCAGGGCAGAGTCACCATTACCGCGGAGGAATCCACCAATACAGTATCCCTGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  91.4% (266/291)  IGHV1-69*01  186  .....................G...........C........G.GC....CC.A.A..................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  D  L  L  L  G  D  T  T  G  H  A  F  D  I  W  G  Q  G  T  T  V  P  V  S
                    Query_3900   271  AGTGTATTATTGTGCGAGAGACCTCTTACTGGGGGATACTACTGGACATGCTTTTGATATCTGGGGCCAGGGGACAACGGTCCCCGTCTC  360
V  91.4% (266/291)  IGHV1-69*01  276  C........C...........---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  84.6% (11/13)    IGHD1-26*01  8    -----------------------------....A.C......------------------------------------------------  20
J  93.8% (45/48)    IGHJ3*02     3    -----------------------------------------------......................A.......T....A.......  45

                                           
                                        S  
                    Query_3900   361  TTCAG  365
J  93.8% (45/48)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_250615

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_3901   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_3901   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_3901   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_3901   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_134423

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD2-2*02                                                                                            14.1    8.3  
IGHJ3*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGGGCCCTAGAAG	GCTATAC	AGAG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGCCCTAGAAGGCTATACAGAGGCTTTTGATATC	ARGGALEGYTEAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  N  Y  Y  W  S  W  M  R  Q  P  P  G  K  G  L  E 
                    Query_3902   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAATTACTACTGGAGCTGGATGCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*01  49   ........................................G..G..................C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  C  F  Y  Y  G  G  N  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  G  T  S  K  N 
                    Query_3902   91   TGGATTGGGTGTTTCTATTACGGTGGAAACACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTGGGCACGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*01  139  ..........A.A........A....G.G....A..................................A.....A.A.............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  N  S  L  T  S  A  D  T  A  V  Y  Y  C  A  R  G  G  A  L  E  G  Y  T  E 
                    Query_3902   181  CAGTTCTCCCTGAAGCTGAACTCTCTGACGTCTGCGGACACGGCCGTATATTACTGTGCGAGAGGGGGGGCCCTAGAAGGCTATACAGAG  270
V  93.0% (227/244)  IGHV4-59*01  229  ...................G....G....CG................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD2-2*02   24   -------------------------------------------------------------------------------.......----  30

                                      ----------->                                  
                                       A  F  D  I  W  G  Q  G  T  A  V  T  V  S  S  
                    Query_3902   271  GCTTTTGATATCTGGGGCCAAGGGACAGCGGTCACCGTCTCTTCAG  316
J  95.7% (44/46)    IGHJ3*02     5    ...........................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_250617

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           263     2e-72
IGHD3-10*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTTAGCATGGAC	TGGTACGGGGAGT	CGAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTTAGCATGGACTGGTACGGGGAGTCGACCTACTACTACTACGGGATAGATGTC	ARLSMDWYGESTYYYYGIDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	205	37	0	84.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  M  N  R  H  Y  W  S  W  I  R  Q  P  P  G  G  G  L  E 
                    Query_3903   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGCGGCTCCATGAATAGGCACTATTGGAGTTGGATTCGACAGCCCCCGGGAGGGGGACTGGAG  90
V  84.7% (205/242)  IGHV4-59*08  49   ...................C.........T........C.G...TT....C.....C.....C..G........A..GAA..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  S  F  I  Y  Y  S  G  T  T  K  S  N  P  S  L  E  R  R  V  S  I  S  V  D  T  T  R  N 
                    Query_3903   91   TGGATTTCGTTCATCTACTACAGTGGGACTACCAAGTCCAACCCCTCCCTCGAGAGGCGCGTCTCCATATCAGTGGACACGACCAGGAAC  180
V  84.7% (205/242)  IGHV4-59*08  139  ......GG..AT.....T..........GC.....C.A.............A....T..A...A..........A......T...A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  L  S  M  D  W  Y  G  E  S 
                    Query_3903   181  CAATTCTCCCTGAAATTGAGGTCTGTGACCGCCGCAGACACGGCCATGTATTATTGCGCGAGGCTTAGCATGGACTGGTACGGGGAGTCG  270
V  84.7% (205/242)  IGHV4-59*08  229  ..G...........GC....C........................G.......C..T.....----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  92.3% (12/13)    IGHD3-10*01  10   ---------------------------------------------------------------------------....T........--  22

                                      GT------------------------>                                 
                                       T  Y  Y  Y  Y  G  I  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_3903   271  ACCTACTACTACTACGGGATAGATGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  330
J  93.1% (54/58)    IGHJ6*02     5    --...............T..G..C..........A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_250616

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           394     7e-112
IGHD2-15*01                                                                                           14.1    9.8   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TT	TAGCTGC	GGTGAGTCCGGGTAGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGAGATTTAGCTGCGGTGAGTCCGGGTAGTTTCTACTTCGGTTTGGACGTC	ARDLAAVSPGSFYFGLDV	291	344	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	105	9	0	92.1
CDR3-IMGT (germline)	291	298	8	7	1	0	87.5
Total	N/A	N/A	296	274	22	0	92.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  Y  G  Y  T  F  S 
                    Query_3904   3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCTTATGGTTACACCTTTAGC  92
V  92.6% (274/296)  IGHV1-18*04  1    .....T...............................................................G...C..............C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  D  T  S  Y 
                    Query_3904   93   AGTTACGGTATCACCTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGCTGGATCAGCGGTTATAATGGTGACACAAGCTAT  182
V  92.6% (274/296)  IGHV1-18*04  91   ..C..........G.........A..............A.................A..........C...C......A......A....  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  V  M  S  L  R  S  D  D 
                    Query_3904   183  GCACAGATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGATGAGCCTGAGATCTGACGAC  272
V  92.6% (274/296)  IGHV1-18*04  181  .......A.C...A..G.................C....................C..........C...G...................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  R  D  L  A  A  V  S  P  G  S  F  Y  F  G  L  D  V  W  G  Q  G  T  T 
                    Query_3904   273  ACGGCCGTGTATTACTGTGCTAGAGATTTAGCTGCGGTGAGTCCGGGTAGTTTCTACTTCGGTTTGGACGTCTGGGGCCAAGGGACCACG  362
V  92.6% (274/296)  IGHV1-18*04  271  ....................G.....----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD2-15*01  19   ----------------------------.......-------------------------------------------------------  25
J  96.2% (50/52)    IGHJ6*02     11   -----------------------------------------------------.....A....A..........................  47

                                                     
                                       V  T  V  S  S 
                    Query_3904   363  GTCACCGTCTCCTCA  377
J  96.2% (50/52)    IGHJ6*02     48   ...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_250619

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           305     3e-85
IGHD6-13*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACTGG	GCAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACTGGGCAGCAGCTGACTGACTAC	ARDTGQQLTDY	276	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	275	147	110	4	33	74.8
CDR3-IMGT (germline)	276	283	8	8	0	0	100
Total	N/A	N/A	283	241	9	33	85.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3905   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  85.2% (241/283)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  D  S  P  R  Y  Y  A  D  S  V  K  G  R  F  T  Y  Y  A  D  S  V  
                    Query_3905   91   AGTGGGTCTCATCCATTAGTAGTAGTGATAGTCCCAGATATTACGCAGACTCAGTGAAGGGCCGATTCACCTATTATGCAGACTCAGTGA  180
V  85.2% (241/283)  IGHV3-21*01  137  ..........................AG....TA..T...C...---------------------------------.............  193
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y                                   A  D  S  V  

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                      K  G  R  F  T  I  S  R  D  D  A  K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  
                    Query_3905   181  AGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATT  270
V  85.2% (241/283)  IGHV3-21*01  194  ..........................A..........C...............................C....................  283
                                      K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-----------CDR3-IMGT----------->                                  
                                      Y  C  A  R  D  T  G  Q  Q  L  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3905   271  ACTGTGCGAGAGATACTGGGCAGCAGCTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
V  85.2% (241/283)  IGHV3-21*01  284  .............-----------------------------------------------------------  296
                                      Y  C  A  R                                                              
D  100.0% (10/10)   IGHD6-13*01  8    -------------------..........-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_160028

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD2-15*01                                                                                           10.3    133   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CGAGAAG	GGTGG	CGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGACACGAGAAGGGTGGCGGGGCGAACGACTAC	VRHEKGGGANDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	6	2	0	75
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P  N  Y
                    Query_3906   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCCAATTA  90
V  93.8% (273/291)  IGHV5-51*01  6    ....................................C........................................GC...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  A  D  S  D  T  R  Y  S  L
                    Query_3906   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAACATCTATCCTGCTGACTCTGACACCAGATACAGTCT  180
V  93.8% (273/291)  IGHV5-51*01  96   .....................................................T...........G.........T...........C.C  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3906   181  GACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACACCGC  270
V  93.8% (273/291)  IGHV5-51*01  186  .T.....C.............................................................C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3906   271  CGTGTATTATTGTGTCAGACACGAGAAGGGTGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  351
V  93.8% (273/291)  IGHV5-51*01  276  .A.......C....CG.....------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                               
D  100.0% (5/5)     IGHD2-15*01  14   ----------------------------.....------------------------------------------------  18
J  97.4% (37/38)    IGHJ4*02     9    -------------------------------------------....................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_134422

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            414     5e-118
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	111	3	0	97.4
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	272	7	0	97.5


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_3907  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  97.5% (272/279)  IGHV6-1*01  26   ...........................................................G......G....AG.................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_3907  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  97.5% (272/279)  IGHV6-1*01  116  ..........................................................................................  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  A  P  E  G  T  A  V  Y  Y  
                    Query_3907  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGGCTCCCGAGGGCACGGCTGTGTATTACT  270
V  97.5% (272/279)  IGHV6-1*01  206  ..............A...............................................A.........A.................  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------CDR3-IMGT--------->                                  
                                     C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_3907  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  97.5% (272/279)  IGHV6-1*01  296  .........---------------------------------------------------------  304
                                     C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02    4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_46658

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*02                                                                                            360     1e-101
IGHD6-6*01                                                                                            18.0    0.66  
IGHJ3*01                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*02	IGHD6-6*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGGC	TATAGCAGGTCG	ATTG	GATGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCTATAGCAGGTCGATTGGATGTTTTTGATGTC	AKAIAGRLDVFDV	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	72	3	0	96
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	95	19	0	83.3
CDR3-IMGT (germline)	292	295	4	4	0	0	100
Total	N/A	N/A	292	261	31	0	89.4


Alignments

                                     <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T 
                    Query_3908  4    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCACC  93
V  89.4% (261/292)  IGHV1-2*02  1    .....G.....G...........G..........................................................C.......  90
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                     GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                      D  H  Y  I  H  W  V  R  Q  A  P  G  H  G  P  E  W  M  G  W  I  N  P  K  T  G  G  I  S  Y 
                    Query_3908  94   GACCACTATATCCACTGGGTGCGACAGGCCCCTGGACATGGGCCTGAGTGGATGGGATGGATCAACCCTAAGACTGGTGGCATAAGTTAT  183
V  89.4% (261/292)  IGHV1-2*02  91   .G.T.......G..........................A....T...........................C.G........C..AC...  180
                                      G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                     -----------------------------------------------FR3-IMGT-----------------------------------
                                      A  Q  R  F  D  G  R  V  T  M  T  R  D  T  S  I  T  T  V  Y  M  E  L  S  R  L  T  S  G  D 
                    Query_3908  184  GCACAGAGATTTGACGGCCGGGTCACGATGACCAGGGACACGTCCATTACTACAGTCTACATGGAGTTGTCGAGGCTGACATCTGGCGAC  273
V  89.4% (261/292)  IGHV1-2*02  181  .......AG...C.G...A.......C....................C.GC....C..........C..AGC.......G.....A....  270
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                     -----------------><--------------CDR3-IMGT-------------->                                 
                                      T  A  V  Y  Y  C  A  K  A  I  A  G  R  L  D  V  F  D  V  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_3908  274  ACGGCCGTATATTACTGTGCGAAGGCTATAGCAGGTCGATTGGATGTTTTTGATGTCTGGGGCCAGGGGACCATGGTCACCGTCTCTTCA  363
V  89.4% (261/292)  IGHV1-2*02  271  ........G.............--------------------------------------------------------------------  292
                                      T  A  V  Y  Y  C  A                                                                      
D  91.7% (11/12)    IGHD6-6*01  4    --------------------------........C...----------------------------------------------------  15
J  93.9% (46/49)    IGHJ3*01    2    ------------------------------------------....C..................A.....A..................  49

                                      
                                      
                    Query_3908  364  G  364
J  93.9% (46/49)    IGHJ3*01    50   .  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_204485

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           427     1e-121
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	74	0	0	100
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	110	4	0	96.5
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	295	284	11	0	96.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  
                    Query_3909   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCCA  93
V  96.3% (284/295)  IGHV5-51*01  2    ......................................................................................A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  
                    Query_3909   94   CTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACA  183
V  96.3% (284/295)  IGHV5-51*01  92   GC..C.......G.................................................T.................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  
                    Query_3909   184  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACA  273
V  96.3% (284/295)  IGHV5-51*01  182  ...........C.....................C...........................................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  
                    Query_3909   274  CCGCCATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  363
V  96.3% (284/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  85.7% (12/14)    IGHD1-26*01  4    ---------------------------------...G....A.....-------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------------......TA................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_3909   364  CGGTCACCGTCTCGTCA  380
J  94.7% (54/57)    IGHJ6*02     46   .............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_204484

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         360     1e-101
IGHD3-10*01                                                                                           10.3    115   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GA	GGGGA	CAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAGGGGACATTATGGACGTC	ARGGDIMDV	244	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_3910     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  H  S  G  L  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  R  S 
                    Query_3910     91   CTGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACAGGTCC  180
V  96.0% (240/250)  IGHV4-30-2*01  139  ..............G......T...........AG..C.T...A......................G.......................  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                         K  N  Q  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  D  I  M  D  V 
                    Query_3910     181  AAGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAGGGGACATTATGGACGTC  270
V  96.0% (240/250)  IGHV4-30-2*01  229  ...........C.......A..................................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01    16   ------------------------------------------------------------------------.....-------------  20
J  100.0% (43/43)   IGHJ6*02       20   --------------------------------------------------------------------------------..........  29

                                                                         
                                         W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3910     271  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  303
J  100.0% (43/43)   IGHJ6*02       30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_204487

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*06                                                                                           350     8e-99
IGHD3-3*01                                                                                            19.9    0.15 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*06	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGGAACA	ATTTTTGGAG	CCACGGGGA	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGGAACAATTTTTGGAGCCACGGGGATATGGACGTC	AKDRNNFWSHGDMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  C  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3911   1    GGTCCCTGAGACTCTCCTGTGCCGCGTCTGGATTCACCTTCAGTCACTGTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-33*06  47   ......................A.....................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  N  N  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3911   91   AGTGGGTGGCAGTTATATGGTACGATGGAAATAATAAATACTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCC  180
V  94.8% (237/250)  IGHV3-33*06  137  ......................T.......G..............C...........................................A  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      Q  N  T  V  Y  L  L  M  N  S  L  R  V  E  D  T  A  V  Y  H  C  A  K  D  R  N  N  F  W  S  
                    Query_3911   181  AGAACACCGTGTATCTGCTAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATCACTGTGCGAAAGATCGGAACAATTTTTGGAGCC  270
V  94.8% (237/250)  IGHV3-33*06  227  .......GC.........A.................C...................T.............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-3*01   9    ------------------------------------------------------------------------------..........--  18

                                      ---------------->                                 
                                      H  G  D  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3911   271  ACGGGGATATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  320
J  97.7% (42/43)    IGHJ6*02     20   -------.......................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_204486

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            341     5e-96
IGHD3-16*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TTGGCCCCGGATTCAGATATATGGGG	TTGGGGGAG	N/A	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATATTGGCCCCGGATTCAGATATATGGGGTTGGGGGAGTAC	ARDIGPGFRYMGLGEY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	252	10	9	1	0	90
Total	N/A	N/A	252	235	17	0	93.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  D  Y  A  M  H  W  F  R  Q  V  P  G  K  G  L  
                    Query_3912   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGAAGATTATGCCATGCATTGGTTCCGGCAAGTTCCAGGGAAGGGCCTGG  90
V  93.3% (235/252)  IGHV3-9*01   47   ...........................................T..............C...G.........C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  S  S  T  K  I  G  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3912   91   AGTGGGTCTCAGGTATTAATTGGAGTAGTACTAAAATAGGCTATGCGGACGCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.3% (235/252)  IGHV3-9*01   137  ..................G.....A....GG..GC...............T.......................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  K  S  L  Y  V  Q  M  N  N  L  R  P  E  D  T  A  L  Y  Y  C  A  R  D  I  G  P  G  F  R  
                    Query_3912   181  AGAAGTCCCTGTATGTACAAATGAACAATCTGAGACCTGAGGACACGGCCTTGTATTACTGTGCAAGAGATATTGGCCCCGGATTCAGAT  270
V  93.3% (235/252)  IGHV3-9*01   227  ....C.........C.G..........G.......G..............................A.....------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                      T------------------>                                  
                                      Y  M  G  L  G  E  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_3912   271  ATATGGGGTTGGGGGAGTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  324
D  100.0% (9/9)     IGHD3-16*01  16   --------.........-------------------------------------  24
J  97.3% (36/37)    IGHJ4*02     12   -----------------................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_204481

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           333     1e-93
IGHD3-3*01                                                                                            10.3    123  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTCTTC	TTTTT	CTCCAAGAGAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTCTTCTTTTTCTCCAAGAGAGAGTCTACTACTTTGACTAC	ARSLLFLQERVYYFDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  K  S  G  G  Y  Y  W  S  W  V  R  Q  H  P  G  K  G  
                    Query_3913   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTTCATCAAGAGTGGTGGCTACTACTGGAGCTGGGTCCGCCAGCACCCAGGGAAGGGCC  93
V  93.1% (230/247)  IGHV4-31*02  50   .....TCC...A.....................C.....GC........T...............A........................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  A  T  S  
                    Query_3913   94   TGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGCCACGTCTA  183
V  93.1% (230/247)  IGHV4-31*02  140  .................................G.............C......................C........A.A........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  S  L  L  F  L  Q  E  
                    Query_3913   184  AGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACTGTCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTCTTCTTTTTCTCCAAGAGA  273
V  93.1% (230/247)  IGHV4-31*02  230  ....................C....C..........C..............................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD3-3*01   10   ---------------------------------------------------------------------------.....----------  14

                                      T------------------>                                  
                                      R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3913   274  GAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (48/48)   IGHJ4*02     1    ------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_204480

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_3914   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.9% (229/244)  IGHV4-59*01  49   .......................................AG....T..............A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3914   91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.9% (229/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_3914   181  CAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.9% (229/244)  IGHV4-59*01  229  ...................G...........................G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_3914   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_204483

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-13*01                                                                                           363     1e-102
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-13*01	N/A	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	CCCCTTTAGGGGC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCCCCTTTAGGGGCCTGGTACTTCGATCTC	ARAPLGAWYFDL	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  D  M  H  W  V  R  Q  A  T  G  K  G  L  
                    Query_3915   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTCCTACGACATGCACTGGGTCCGCCAAGCTACAGGAAAAGGTCTGG  90
V  97.2% (239/246)  IGHV3-13*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  D  M  H  W  V  R  Q  A  T  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  A  T  A  G  D  T  Y  Y  T  G  S  V  K  G  R  F  T  I  S  R  E  S  A  K  
                    Query_3915   91   AGTGGGTCTCAGCTATTGCTACTGCTGGTGACACATACTATACAGGCTCCGTGAAGGGCCGATTCACCATCTCCAGAGAAAGTGCCAAGA  180
V  97.2% (239/246)  IGHV3-13*01  137  ..................G......................C.......................................A........  226
                                      E  W  V  S  A  I  G  T  A  G  D  T  Y  Y  P  G  S  V  K  G  R  F  T  I  S  R  E  N  A  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  S  L  Y  L  Q  I  N  S  L  R  A  G  V  T  A  V  Y  Y  C  A  R  A  P  L  G  A  W  Y  F  
                    Query_3915   181  ACTCCTTGTATCTTCAAATAAACAGCCTGAGAGCCGGGGTCACGGCTGTGTATTACTGTGCAAGAGCCCCTTTAGGGGCCTGGTACTTCG  270
V  97.2% (239/246)  IGHV3-13*01  227  ...................G...................A..........................------------------------  292
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R                          
J  98.0% (49/50)    IGHJ2*01     4    -------------------------------------------------------------------------------...........  14

                                      ---->                                  
                                      D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3915   271  ATCTCTGGGGCCGTGGCACCCTGGTCACAGTCTCCTCAG  309
J  98.0% (49/50)    IGHJ2*01     15   ............................T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_204488

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            333     1e-93
IGHD2-21*01                                                                                           10.3    118  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CACACCTTTTCG	TGTGG	CAGGGTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACACCTTTTCGTGTGGCAGGGTCACTTTGACAAC	ATHLFVWQGHFDN	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	20	6	0	76.9
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	126	24	20	4	0	83.3
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_3916   2    CCCTGTCCCTCACCTGCGCAGCCTCAGGATTCACCTTTAGTAGGTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  93.8% (228/243)  IGHV3-7*01   50   .....AGA...T....T........T.................C..............................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  A  N  I  N  Q  D  G  S  E  P  Y  Y  V  D  S  M  R  G  R  F  T  I  S  R  D  N  A  K  
                    Query_3916   92   GGGTGGCCAACATAAACCAAGACGGAAGTGAGCCATACTATGTGGACTCTATGAGGGGCCGATTCACCATCTCCAGAGACAACGCCAAGA  181
V  93.8% (228/243)  IGHV3-7*01   140  ................G.....T.........AA................G...A...................................  229
                                      W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><--------------CDR3-IMGT-------
                                      N  S  M  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  H  L  F  V  W  Q  G  H  
                    Query_3916   182  ACTCAATGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGACACACCTTTTCGTGTGGCAGGGTCACT  271
V  93.8% (228/243)  IGHV3-7*01   230  .....C...A.....................................................---------------------------  292
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  100.0% (5/5)     IGHD2-21*01  8    ---------------------------------------------------------------------------.....----------  12
J  95.6% (43/45)    IGHJ4*02     4    ---------------------------------------------------------------------------------------...  6

                                      ------->                                  
                                      F  D  N  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_3916   272  TTGACAACTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  313
J  95.6% (43/45)    IGHJ4*02     7    .....T.......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_264920

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTAA	TACTATCGTTCGGGGGGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTAATACTATCGTTCGGGGGGTTATTTTGACTGC	ARGH*YYRSGGYFDC	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_3917   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ...............................G.............................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_3917   91   CTGGAGTGGATTGGACACATCTATTACAGCGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATTTCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ..............GT.............T............................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  *  Y  Y  R  S 
                    Query_3917   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTAATACTATCGTTCG  270
V  97.6% (244/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.5% (19/21)    IGHD3-10*01  5    ------------------------------------------------------------------------------......G.....  16

                                      ----------------->                                  
                                       G  G  Y  F  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3917   271  GGGGGTTATTTTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  90.5% (19/21)    IGHD3-10*01  17   ...A.....-------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_264921

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            347     7e-98
IGHD6-13*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCGAGGG	GCAGCAGTTGGTAC	CATT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCGAGGGGCAGCAGTTGGTACCATTCTACGTTGACTCC	ARFEGQQLVPFYVDS	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	234	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  T  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_3918   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGATCCACTAGTAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.1% (234/246)  IGHV4-4*02   49   ................................C....TC..C................................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_3918   91   GAGTGGATTGGTGAAATCCATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACTATATCAGTAGACAAGTCTAAG  180
V  95.1% (234/246)  IGHV4-4*02   139  ...........G......T.................................................C.................C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  H  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  E  G  Q  Q  L  V  P 
                    Query_3918   181  AACCACCTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGATTCGAGGGGCAGCAGTTGGTACCA  270
V  95.1% (234/246)  IGHV4-4*02   229  .....GT..........G....G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  92.9% (13/14)    IGHD6-13*01  8    --------------------------------------------------------------------------.......C......--  21

                                      -------------->                                  
                                       F  Y  V  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3918   271  TTCTACGTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  95.7% (45/47)    IGHJ4*02     2    --....T......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_264922

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     2e-124
IGHD6-19*01                                                                                           16.1    2.6   
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGTGGGGAAACAGA	AGTGGCTG	CCA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCC	ARLRGETEVAANNWFDP	291	341	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	72	2	0	97.3
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	114	0	0	100
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	286	7	0	97.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  M  G  S  G  Y  T  F  A  
                    Query_3919   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTATGGGATCTGGATACACCTTTGCCG  93
V  97.6% (286/293)  IGHV5-51*03  2    ..................................................................A...T..........G....A..A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      G  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  D  T  R  Y  
                    Query_3919   94   GCTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACTCTGATACCAGATACA  183
V  97.6% (286/293)  IGHV5-51*03  92   ............G..............................................A..............................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_3919   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  97.6% (286/293)  IGHV5-51*03  182  ..........................................................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  M  Y  Y  C  A  R  L  R  G  E  T  E  V  A  A  N  N  W  F  D  P  W  G  Q  G  T  L  V  
                    Query_3919   274  CCGCCATGTATTACTGTGCGAGACTTCGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCA  363
V  97.6% (286/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD6-19*01  10   ----------------------------------------........------------------------------------------  17
J  100.0% (50/50)   IGHJ5*02     1    ---------------------------------------------------.......................................  39

                                                 
                                      T  V  S  S 
                    Query_3919   364  CCGTCTCCTCA  374
J  100.0% (50/50)   IGHJ5*02     40   ...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_264923

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           449     3e-128
IGHD6-13*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAC	ATAGCAGCAGCTGGT	CGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTAC	ARSHSSSWSGFDY	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	24	0	0	100
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	113	1	0	99.1
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	290	3	0	99


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_3920   2    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  91
V  99.0% (290/293)  IGHV5-51*03  2    ....G........G............................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_3920   92   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  181
V  99.0% (290/293)  IGHV5-51*03  92   ..........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  A  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_3920   182  GCCCGTCCTTCCAAGGCCAGGTCGCCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  99.0% (290/293)  IGHV5-51*03  182  .......................A..................................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  A  M  Y  Y  C  A  R  S  H  S  S  S  W  S  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3920   272  CCGCCATGTATTACTGTGCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  361
V  99.0% (290/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)   IGHD6-13*01  5    ---------------------------...............------------------------------------------------  19
J  100.0% (44/44)   IGHJ4*02     5    ----------------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_264924

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           360     1e-101
IGHD3-16*01                                                                                           50.7    9e-11 
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AAGAAACAAT	TATTATGATTACGTCTGGGGGAGTCATGGTTATAC	GGGAAGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAAACAATTATTATGATTACGTCTGGGGGAGTCATGGTTATACGGGAAGGTTTGACTTC	ARNNYYDYVWGSHGYTGRFDF	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	237	7	0	97.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  S  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3921   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTTAGCAGCTTTGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.1% (237/244)  IGHV3-23*01  47   ........................C.......................A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3921   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGGCAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  97.1% (237/244)  IGHV3-23*01  137  ...............................T.....................................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  N  N  Y  Y  D  Y  V  
                    Query_3921   181  AGAACACTCTCTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATATTACTGTGCAAGAAACAATTATTATGATTACGTCT  270
V  97.1% (237/244)  IGHV3-23*01  227  .......G..G.......................................G.............--------------------------  290
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  91.4% (32/35)    IGHD3-16*01  2    --------------------------------------------------------------------------..............T.  17

                                      DR3-IMGT-------------------------->                                  
                                      W  G  S  H  G  Y  T  G  R  F  D  F  W  G  R  G  T  H  V  T  V  S  S  
                    Query_3921   271  GGGGGAGTCATGGTTATACGGGAAGGTTTGACTTCTGGGGCCGGGGAACCCACGTCACCGTCTCCTCAG  339
D  91.4% (32/35)    IGHD3-16*01  18   ........T...C......--------------------------------------------------  36
J  90.7% (39/43)    IGHJ4*02     6    --------------------------.......A........A........TG................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_264926

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            397     8e-113
IGHD3-10*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGAC	TGGTTCGGGGA	CTT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTAC	ARVTGSGTYSFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  G  S  Y
                    Query_3922   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCGGCAGCTA  90
V  93.8% (272/290)  IGHV1-8*02   6    ..................G...............................................................AC......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  D  Y  A  Q
                    Query_3922   91   TGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATGAATCCTAACAGTGGGAACACAGACTATGCACA  180
V  93.8% (272/290)  IGHV1-8*02   96   .........................A..................................C...........T.......G.........  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  Y  M  E  L  S  S  L  G  S  A  D  T  A
                    Query_3922   181  GAAGTTCCGGGGCAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCTACATGGAGCTGAGTAGTCTGGGATCTGCCGACACGGC  270
V  93.8% (272/290)  IGHV1-8*02   186  ........A.......................A...C..C.T........................C..C...A......AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  V  T  G  S  G  T  Y  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3922   271  CGTCTATTACTGTGCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  93.8% (272/290)  IGHV1-8*02   276  ...G................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (11/11)   IGHD3-10*01  10   ------------------------...........---------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    --------------------------------------...A......C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_264927

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD2-21*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGGGGG	ATTGTGATGGT	ATTAACTGCTTCCCCTGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGGATTGTGATGGTATTAACTGCTTCCCCTGGTACTACTATTATGGAATGCACGTC	AKGDCDGINCFPWYYYYGMHV	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	221	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  L  Y  G  G  S  F  S  G  H  Y  W  I  W  L  R  Q  S  P  G  K  G  L  E 
                    Query_3923   1    ACCCTGTCCCTCACCTGCGCTCTCTATGGTGGGTCCTTCAGTGGTCACTACTGGATTTGGCTCCGCCAGTCCCCCGGGAAGGGGCTGGAG  90
V  91.7% (221/241)  IGHV4-34*01  49   .....................G.......................T.........GC...A........C....A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  K  Y  N  S  S  L  K  S  R  V  A  M  S  I  D  A  S  K  S 
                    Query_3923   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACGAAGTACAACTCGTCCCTCAAGAGTCGAGTCGCCATGTCAATAGACGCGTCCAAGAGT  180
V  91.7% (221/241)  IGHV4-34*01  139  ................................C..C......C....................A....A...G.....A.........AC  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  Y  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  G  D  C  D  G  I  N  C  F 
                    Query_3923   181  CAATTCTACCTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAAGGGGGATTGTGATGGTATTAACTGCTTC  270
V  91.7% (221/241)  IGHV4-34*01  229  ..G....C...........G...........................G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (10/11)    IGHD2-21*01  6    -------------------------------------------------------------------......G....------------  16

                                      MGT-------------------------->                                 
                                       P  W  Y  Y  Y  Y  G  M  H  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_3923   271  CCCTGGTACTACTATTATGGAATGCACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  333
J  91.2% (52/57)    IGHJ6*02     6    ------........C..C..T...G...........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_78500

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           336     1e-94
IGHD3-10*01                                                                                           39.1    3e-07
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	G	ACTATGGAACGGGGAGTTATTATAAC	AAGACCC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACTATGGAACGGGGAGTTATTATAACAAGACCCATGGACGTC	AKTMERGVIITRPMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  S  F  S  H  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3924   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCAGCTTCAGTCACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-30*18  47   ........................C...........C.......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  A  Y  D  E  S  F  K  S  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3924   91   AGTGGGTGGCAGTTATAGCATATGATGAAAGTTTTAAATCTTACGCAGCCTCCGTGAAGGGCCGATTTACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-30*18  137  .................T.........G....AA.....AC..T....A..................C......................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  K  T  M  E  R  G  V  I  
                    Query_3924   181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGATGAGGACACGGCTGTGTATTATTGTGCGAAGACTATGGAACGGGGAGTTATTA  270
V  93.5% (231/247)  IGHV3-30*18  227  ...A................................C.....................C........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.3% (24/26)    IGHD3-10*01  6    --------------------------------------------------------------------.......TT.............  27

                                      T------------------>                                 
                                      I  T  R  P  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3924   271  TAACAAGACCCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  323
D  92.3% (24/26)    IGHD3-10*01  28   ....-------------------------------------------------  31
J  97.6% (41/42)    IGHJ6*02     21   -----------......................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_264929

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     9e-121
IGHD2-15*01                                                                                           14.1    9.8   
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAGCGTT	AGGACATTGT	GTTAGAAGCACTTGCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGCGTTAGGACATTGTGTTAGAAGCACTTGCGACTACGGTATGGACGTC	ATALGHCVRSTCDYGMDV	290	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	293	4	4	0	0	100
Total	N/A	N/A	291	281	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_3925   3    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  92
V  96.6% (281/291)  IGHV5-51*01  2    ....G.....G...............................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  H  P  G  D  S  D  T  R  Y  
                    Query_3925   93   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCCATCCTGGTGACTCTGATACCAGATACA  182
V  96.6% (281/291)  IGHV5-51*01  92   G.............................................................T...........................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  G  T  A  Y  L  Q  W  S  G  L  K  A  S  D  
                    Query_3925   183  GTCCGTCTTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCGGTACCGCCTACCTGCAGTGGAGTGGCCTGAAGGCCTCGGACA  272
V  96.6% (281/291)  IGHV5-51*01  182  .C.....C.......................................A.C....................CA..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------------CDR3-IMGT--------------------->                   
                                      T  A  M  Y  Y  C  A  T  A  L  G  H  C  V  R  S  T  C  D  Y  G  M  D  V  W  G  Q  G  T  T  
                    Query_3925   273  CCGCCATGTATTACTGTGCGACAGCGTTAGGACATTGTGTTAGAAGCACTTGCGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGG  362
V  96.6% (281/291)  IGHV5-51*01  272  .....................---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  90.0% (9/10)     IGHD2-15*01  1    ----------------------------....T.....----------------------------------------------------  10
J  100.0% (50/50)   IGHJ6*02     13   ------------------------------------------------------....................................  48

                                                    
                                      V  T  V  S  S 
                    Query_3925   363  TCACCGTCTCCTCA  376
J  100.0% (50/50)   IGHJ6*02     49   ..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_78502

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-10*01                                                                                           10.3    118  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACA	GGGGA	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACAGGGGATACTACGGTATGGACGTC	ARDDRGYYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_3926   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTATTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   .....................................................C.A.....G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  H  Y  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S 
                    Query_3926   91   CTGGAGTGGATTGGGAACATCCATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ...............T.....T...................C.................G........T.....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  E  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  D  D  R  G  Y  Y  G 
                    Query_3926   181  AAGAACCAGTTCTCCCTGGAGCTGACCTCTATGACAGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGATGACAGGGGATACTACGGT  270
V  94.4% (237/251)  IGHV4-31*03  229  ..................A......G....G....T.................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------------.....---------  20
J  96.0% (48/50)    IGHJ6*02     12   ---------------------------------------------------------------------------------.........  20

                                      -------->                                
                                       M  D  V  W  G  Q  G  I  T  V  T  V  S  S
                    Query_3926   271  ATGGACGTCTGGGGCCAAGGGATTACGGTCACCGTCTCCTC  311
J  96.0% (48/50)    IGHJ6*02     21   ......................CC.................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_78503

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           294     6e-82
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	AGGGGAAGAA	TATGAT	CAGACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGAAGGGGAAGAATATGATCAGACTTTTGACTAC	AREGEEYDQTFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	12	12	0	50
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  D  Y  Y  M  A  W  I  R  Q  A  P  G  K  G  L  
                    Query_3927   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACTGACTACTACATGGCCTGGATACGTCAGGCTCCAGGGAAGGGGCTGG  90
V  87.6% (219/250)  IGHV3-11*01  47   ..........................................G.............AG......C..C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  T  T  T  T  K  I  G  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_3927   91   AGTGGATTTCATACATTACTACTACCACCAAGATCGGATACTACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCCGGGACGACGCCA  180
V  87.6% (219/250)  IGHV3-11*01  137  .....G............G..G..GTGGT.GT.C.AT...........................A............A.....A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      T  S  S  V  F  L  L  M  S  S  L  R  D  E  D  T  A  V  Y  F  C  A  R  E  G  E  E  Y  D  Q  
                    Query_3927   181  CGAGCTCAGTGTTTCTGCTAATGAGCAGCCTGAGAGACGAGGACACGGCCGTGTATTTCTGTGCCAGGGAAGGGGAAGAATATGATCAGA  270
V  87.6% (219/250)  IGHV3-11*01  227  A..A....C...A.....A.....A...........C....................A......G..A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  5    --------------------------------------------------------------------------------......----  10

                                      ---------->                                  
                                      T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3927   271  CTTTTGACTACTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  315
J  97.7% (42/43)    IGHJ4*02     6    --..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_78504

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           353     9e-100
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TCTGTCCCCG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGTCCCCGGACTAC	ARDLSPDY	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  S  D  Y  F  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_3928   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATGTTCAGTGACTACTTCATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-11*01  47   ....................................CC.............A......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  S  S  G  R  S  I  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  S  A  
                    Query_3928   91   AGTGGGTTTCACACATTAGTAGTAGTGGTAGAAGCATATACTACGCAGACTCTGTGGAGGGCCGATTCACCATCTCCAGGGACAGCGCCA  180
V  95.2% (238/250)  IGHV3-11*01  137  ...........T...................T.C......................A...........................A.....  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  L  S  P  D  Y  W  
                    Query_3928   181  AGAACTCACTATTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCTTGTATTATTGTGCGAGAGATCTGTCCCCGGACTACTGGG  270
V  95.2% (238/250)  IGHV3-11*01  227  ..........G.A.....................................G.......C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (40/40)   IGHJ4*02     9    --------------------------------------------------------------------------------..........  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_3928   271  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  300
J  100.0% (40/40)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_78506

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           313     1e-87
IGHD2-21*01                                                                                           10.3    123  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTTATCCTT	CATAT	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTTATCCTTCATATAACTACGGTATGGACGCC	ARSYPSYNYGMDA	255	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	254	129	105	9	15	81.4
CDR3-IMGT (germline)	255	260	6	6	0	0	100
Total	N/A	N/A	260	232	13	15	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3929   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAATTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.2% (232/260)  IGHV3-53*01  47   .................................................C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><------------------------------------------------------
                                      E  W  V  S  L  I  Y  S  G  P  S  T  Y  D  A  E  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  
                    Query_3929   91   AGTGGGTCTCACTTATTTATAGCGGTCCTAGCACATACGACGCAGAGACACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCA  180
V  89.2% (232/260)  IGHV3-53*01  137  ...........G..............GG........---------------.............C.........................  211
                                      E  W  V  S  V  I  Y  S  G  G  S  T                 Y  Y  A  D  S  V  K  G  R  F  T  I  S  

                                      -----FR3-IMGT------------------------------------------------------------><--------------C
                                      R  D  N  R  K  N  T  L  Y  L  Q  L  H  S  L  R  A  E  D  T  A  V  Y  Y  W  A  R  S  Y  P  
                    Query_3929   181  GGGACAATCGCAAGAACACACTGTATCTTCAATTGCACAGTCTGAGAGCCGAGGACACGGCCGTGTATTACTGGGCGAGATCTTATCCTT  270
V  89.2% (232/260)  IGHV3-53*01  212  .A......TC.........G............A..A....C................................T......----------  291
                                      R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R           

                                      DR3-IMGT-------------->                                 
                                      S  Y  N  Y  G  M  D  A  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3929   271  CATATAACTACGGTATGGACGCCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
D  100.0% (5/5)     IGHD2-21*01  3    .....---------------------------------------------------  7
J  98.0% (49/50)    IGHJ6*02     13   ------...............T..................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_78507

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           433     1e-123
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_3930   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACACCTTAACCAACTA  90
V  97.9% (283/289)  IGHV5-51*01  6    ..................................................................T..........G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_3930   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  97.9% (283/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_3930   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (283/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3930   271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  97.9% (283/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_3930   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_291850

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*04                                                                                         402     3e-114
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*04	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCCACGAGAGATAT	GGGGAGTT	CTC	TGATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCACGAGAGATATGGGGAGTTCTCTGATTAC	ARLHERYGEFSDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  Q  A  S  G  F  T  F  T  T  Y
                    Query_3931     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTCAGGCCTCTGGATTCACCTTTACCACCTA  90
V  94.5% (273/289)  IGHV5-10-1*04  6    .............................................................A...GT.......A..G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          F  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_3931     91   CTTCATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  94.5% (273/289)  IGHV5-10-1*04  96   ..GG......................................................................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  Q  V  T  L  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  R  L  K  A  S  D  S  A
                    Query_3931     181  GTCCTTCCAAGGACAGGTCACCCTCTCTGTTGACAAGTCCATCAGTACTGCCTACCTGCAGTGGAGCAGGCTGAAGGCCTCGGACTCCGC  270
V  94.5% (273/289)  IGHV5-10-1*04  186  ............C.........A....A.C...............C.......................C...............A....  275
                                          S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          M  Y  Y  C  A  R  L  H  E  R  Y  G  E  F  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3931     271  CATGTACTACTGTGCGAGACTCCACGAGAGATATGGGGAGTTCTCTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  94.5% (273/289)  IGHV5-10-1*04  276  ......T............-------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD3-10*01    16   ----------------------------------........--------------------------------------------  23
J  97.6% (40/41)    IGHJ4*02       8    ---------------------------------------------...C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_291853

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-72*01                                                                                           338     5e-95
IGHD2-8*01                                                                                            16.1    2.4  
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-72*01	IGHD2-8*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAG	GCTGTG	GTACTATTGGT	TATGAGGGTGGGGCCTG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGGCTGTGGTACTATTGGTTATGAGGGTGGGGCCTGCTACTACGGCATGGACGTC	*RLWYYWL*GWGLLLRHGR	250	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	249	115	107	7	1	93
CDR3-IMGT (germline)	250	256	7	6	1	0	85.7
Total	N/A	N/A	256	238	17	1	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  D  Y  Y  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_3932   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACTGACTATTACATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.0% (238/256)  IGHV3-72*01  47   ..........................................G....C.C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  S  R  K  K  V  H  S  Y  S  T  E  Y  A  A  S  V  K  G  R  F  S  I  S  R  D  
                    Query_3932   91   AGTGGGTTGGTCGTAGTAGAAAAAAAGTTCACAGTTACTCCACAGAATACGCCGCGTCTGTGAAAGGCAGATTCAGCATCTCAAGGGATG  180
V  93.0% (238/256)  IGHV3-72*01  137  ..........C....C......C....C.A........A....................................C.........A....  226
                                      E  W  V  G  R  T  R  N  K  A  N  S  Y  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT-----------------------------------------------------><--------------------
                                      E  S  K  K  L  T  A  S  A  N  E  Q  P  E  S  R  G  H  G  R  L  L  L  Y  *  R  L  W  Y  Y  
                    Query_3932   181  AGTCAAAAAAACTCACTGCATCTGCAAATGAACAGCCTGAAAGCCGAGGACACGGCCGTCTATTACTGTACTAGAGGCTGTGGTACTATT  270
V  93.0% (238/256)  IGHV3-72*01  227  .T..-...G.........T.......................A................G.........G......--------------  301
                                      D  S   K  N  S  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R                
D  90.9% (10/11)    IGHD2-8*01   9    ----------------------------------------------------------------------------------......A.  16

                                      -----CDR3-IMGT------------------------>                                 
                                      W  L  *  G  W  G  L  L  L  R  H  G  R  L  G  P  R  D  H  G  P  R  L  L  
                    Query_3932   271  GGTTATGAGGGTGGGGCCTGCTACTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCCCCGTCTCCTCA  342
D  90.9% (10/11)    IGHD2-8*01   17   ...---------------------------------------------------------------------  19
J  96.2% (50/52)    IGHJ6*02     11   --------------------.........T..............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_291854

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           413     2e-117
IGHD5-18*01                                                                                           14.1    9.6   
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGAG	TACATCTATG	CCTCGGGCGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGAGTACATCTATGCCTCGGGCGGACTGGGTCGACCAC	ARDRSTSMPRADWVDH	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  I  S  Y 
                    Query_3933   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTTATCAGTTAT  91
V  95.5% (277/290)  IGHV1-18*01  7    ............................A....................................T................C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  T  Y  N  A  N  T  N  S  A  Q 
                    Query_3933   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCTACAATGCCAACACAAACTCTGCACAG  181
V  95.5% (277/290)  IGHV1-18*01  97   ..........................................................G.G.T.......GT..........A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  I  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3933   182  AACCTCCAGGGCAGAATCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAACTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.5% (277/290)  IGHV1-18*01  187  ..G............G...........................................G..............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  D  R  S  T  S  M  P  R  A  D  W  V  D  H  W  G  Q  G  T  L  V  T  V  S 
                    Query_3933   272  GTGTATTACTGTGCGAGAGATCGGAGTACATCTATGCCTCGGGCGGACTGGGTCGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  361
V  95.5% (277/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD5-18*01  6    --------------------------....G.....------------------------------------------------------  15
J  95.8% (46/48)    IGHJ5*02     4    ----------------------------------------------.....T......C...............................  47

                                          
                                       S  
                    Query_3933   362  TCAG  365
J  95.8% (46/48)    IGHJ5*02     48   ....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_291855

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD1-26*01                                                                                           10.3    121  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	T	TATAG	ATTTCAAAGCAATGAACCCCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATTATAGATTTCAAAGCAATGAACCCCTCTTTGACTAC	AKDYRFQSNEPLFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  R  G  L  
                    Query_3934   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   .............................................G...................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  I  E  S  G  G  D  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3934   91   AGTGGGTCTCAGGTATAATTGAAAGTGGTGGTGACACGTACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-23*01  137  ............C...T.G..GT.........AG...A......G.............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  D  E  D  T  A  F  Y  Y  C  A  K  D  Y  R  F  Q  S  N  
                    Query_3934   181  AGAACACCCTGTATCTCCAAATGAACAGCCTCAGAGACGAGGACACGGCCTTTTATTACTGTGCGAAGGATTATAGATTTCAAAGCAATG  270
V  92.8% (232/250)  IGHV3-23*01  227  .......G........G..............G....C.............G.A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD1-26*01  3    -----------------------------------------------------------------------.....--------------  7

                                      ---------------->                                  
                                      E  P  L  F  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_3934   271  AACCCCTCTTTGACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  321
J  97.7% (43/44)    IGHJ4*02     5    -------..........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_291856

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           341     5e-96
IGHD6-13*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGATGGGGG	AGCAGCAGCTGGT	CTGCCCCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATCGATGGGGGAGCAGCAGCTGGTCTGCCCCTCACTTTGACTGC	TRDRWGSSSWSAPHFDC	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	22	8	0	73.3
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	237	19	0	92.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3935   1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCAACTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.6% (237/256)  IGHV3-49*04  47   ....................................C.....................................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  V  R  S  Y  T  H  G  G  T  T  A  Y  A  A  A  V  K  G  R  F  T  I  S  R  D  
                    Query_3935   91   AGTGGGTTGGCTTCGTGAGAAGTTATACCCATGGTGGGACAACAGCTTACGCCGCGGCTGTGAAAGGCAGATTCACCATCTCAAGGGATG  180
V  92.6% (237/256)  IGHV3-49*04  137  .......A..T...A.T.....CA.AG.TT...............AA.........T............................A....  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  T  S  I  A  Y  L  E  M  D  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  D  R  W  G  S  
                    Query_3935   181  ATTCCACAAGCATCGCCTATCTGGAAATGGACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGCACTAGAGATCGATGGGGGAGCA  270
V  92.6% (237/256)  IGHV3-49*04  227  ......A................C.....A.....................................T........--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (13/13)   IGHD6-13*01  7    --------------------------------------------------------------------------------------....  10

                                      DR3-IMGT-------------------->                                  
                                      S  S  W  S  A  P  H  F  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3935   271  GCAGCTGGTCTGCCCCTCACTTTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD6-13*01  11   .........------------------------------------------------------  19
J  97.8% (44/45)    IGHJ4*02     4    ------------------.........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_210474

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_3936   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_3936   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_3936   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3936   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_291858

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           307     1e-85
IGHD3-10*01                                                                                           10.3    120  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TAGGACCGGATG	GGTTC	AGTTGAT	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAGGACCGGATGGGTTCAGTTGATCTACCTTGACTCC	ARHRTGWVQLIYLDS	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	220	24	0	90.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  G  S  I  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_3937   4    CCCTGAGACTCTCCTGTAGTGTCTCTGGTGGCTCCATCAGTGGTTATTCCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  90.2% (220/244)  IGHV4-59*08  50   .....TCC...A....C.C......................A....C.A.........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  F  I  S  Y  S  G  N  T  N  S  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S  
                    Query_3937   94   GGATTGGGTTTATCTCATACAGTGGGAATACCAACTCCAACCCCTCCCTCAAGAGTCGAGTCACTATATCAGTAGACACGTCGAAGAGTC  183
V  90.2% (220/244)  IGHV4-59*08  140  .........A.....AT..........GC.......A...........................C.................C....AC.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  I  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  H  R  T  G  W  V  Q  L  I  
                    Query_3937   184  AATTCTCCCTGAAGTTGATTTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAGACATAGGACCGGATGGGTTCAGTTGATCT  273
V  90.2% (220/244)  IGHV4-59*08  230  .G............C...GC...............................A............--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (5/5)     IGHD3-10*01  11   ----------------------------------------------------------------------------.....---------  15
J  93.3% (42/45)    IGHJ4*02     2    ----------------------------------------------------------------------------------------..  3

                                      ---------->                                
                                      Y  L  D  S  W  G  Q  G  N  L  V  T  V  S  S
                    Query_3937   274  ACCTTGACTCCTGGGGCCAGGGAAACCTGGTCACCGTCTCCTC  316
J  93.3% (42/45)    IGHJ4*02     4    ..T......A..............C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_291859

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           299     2e-83
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GGGCCAGAGA	AGTAGGACC	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGAGGGCCAGAGAAGTAGGACCCTTGACTAC	ATEGQRSRTLDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	247	219	28	0	88.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  N  Y  M  S  W  V  R  Q  A  P  G  M  G  L  
                    Query_3938   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAATAACTATATGAGTTGGGTCCGCCAGGCTCCAGGGATGGGGCTGG  90
V  88.7% (219/247)  IGHV3-53*01  47   ...............................G......G......GC.....C.....C......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  I  Y  S  G  G  G  S  F  Y  T  H  S  V  E  G  R  F  T  I  S  R  D  D  Y  K  
                    Query_3938   91   AGTGGGTCTCTCTTATTTACAGCGGTGGTGGCTCCTTCTACACACACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACGATTACAAGA  180
V  88.7% (219/247)  IGHV3-53*01  137  ..........AG.......T.........A..A.A.A....G..G........A..........................A...C.....  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  T  V  Y  L  Q  M  N  N  V  R  A  E  D  T  A  I  Y  Y  C  A  T  E  G  Q  R  S  R  T  L  
                    Query_3938   181  ACACGGTTTATCTTCAAATGAACAATGTTAGAGCCGAGGACACGGCCATATATTACTGTGCGACAGAGGGCCAGAGAAGTAGGACCCTTG  270
V  88.7% (219/247)  IGHV3-53*01  227  .....C.G................GCC.G..................G.G.............G...-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  88.9% (8/9)      IGHD2-2*01   11   -----------------------------------------------------------------------------.....T...----  19
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_3938   271  ACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  309
J  97.6% (41/42)    IGHJ4*02     10   ...........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_210476

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            324     8e-91
IGHD3-10*01                                                                                           12.2    31   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TTAAGGGAAGTA	GTTCGTCGACTTATT	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTAAGGGAAGTAGTTCGTCGACTTATTACTGGTTCGACCCC	VKGSSSSTYYWFDP	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	241	1	1	0	0	100
Total	N/A	N/A	241	224	17	0	92.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  L  V  S  G  G  S  I  T  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_3939   1    ACCCTGTCCCTCACCTGCCTTGTCTCTGGTGGGTCCATTACCAGTAGTAACTGGTGGTCTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  92.9% (224/241)  IGHV4-4*02   49   ..................GC............C.....C.G................AG...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  A  D  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  K 
                    Query_3939   91   GAGTGGATTGCGGATATCTATTCTAGTGGGAGCACCAATTACAACCCGTCCCTGAAGAGTCGAGTCACCATCTCATTAGACAAGTCCAAG  180
V  92.9% (224/241)  IGHV4-4*02   139  ..........G...A......CA...............C..............C.................A...G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  K  G  S  S  S  S  T  Y  Y 
                    Query_3939   181  AACCAGTTCTCCCTGAAACTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGTTAAGGGAAGTAGTTCGTCGACTTATTAC  270
V  92.9% (224/241)  IGHV4-4*02   229  .................G......................................C....-----------------------------  289
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  80.0% (12/15)    IGHD3-10*01  12   -------------------------------------------------------------------------.....GG..G.....--  26
J  95.8% (46/48)    IGHJ5*02     4    ----------------------------------------------------------------------------------------..  5

                                      ----------->                                  
                                       W  F  D  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3939   271  TGGTTCGACCCCTGGGGCCGGGGAACCCTGGTCACTGTCTCCTCAG  316
J  95.8% (46/48)    IGHJ5*02     6    ...................A...............C..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_313684

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           346     2e-97
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AC	ATTACGATTTTTCGAGTGGT	CTCATTATCGGAAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACATTACGATTTTTCGAGTGGTCTCATTATCGGAACTGACTAC	AREHYDFSSGLIIGTDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  R  G  S  Y  Y  W  S  W  N  R  Q  S  P  G  K  G 
                    Query_3940   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGAGGTTCTTACTACTGGAGTTGGAACCGGCAGTCCCCAGGGAAGGGA  90
V  94.0% (236/251)  IGHV4-61*01  49   .........................................C..T...AG............C....T.......C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  H  S  G  S  T  N  Y  H  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_3940   91   CTGGAGTGGATTGGGTATATTTATCACAGTGGGAGCACCAACTATCACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCC  180
V  94.0% (236/251)  IGHV4-61*01  139  ....................C...T...................CA................................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  H  Y  D  F  S  S 
                    Query_3940   181  AAGAACCAGTTCTCCCTGAAGCTGAATTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGAACATTACGATTTTTCGAGT  270
V  94.0% (236/251)  IGHV4-61*01  229  .........................GC..........................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-3*01   3    -------------------------------------------------------------------------............G....  19

                                      MGT-------------------->                                  
                                       G  L  I  I  G  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3940   271  GGTCTCATTATCGGAACTGACTACTGGGGCCAGGGTACCCTGGTCACCGTCTCCTCAG  328
D  95.0% (19/20)    IGHD3-3*01   20   ...-------------------------------------------------------  22
J  97.6% (40/41)    IGHJ4*02     8    -----------------..................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_323566

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTC	ARHGDDSGGYLYYLYGMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	111	3	0	97.4
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	295	285	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_3941   4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  93
V  96.6% (285/295)  IGHV5-51*01  2    ..G...............................A...................A...................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  S  I  D  P  G  D  S  D  T  R  Y  
                    Query_3941   94   CCTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGCATCGATCCTGGTGACTCTGATACCAGATACA  183
V  96.6% (285/295)  IGHV5-51*01  92   G...........G............................................T....T...........................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_3941   184  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  96.6% (285/295)  IGHV5-51*01  182  ...........C...................A.C........................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  M  Y  Y  C  A  R  H  G  D  D  S  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  
                    Query_3941   274  CCGCCATGTATTACTGTGCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTCTGGGGCCAAGGGACCC  363
V  96.6% (285/295)  IGHV5-51*01  272  .........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  92.9% (13/14)    IGHD1-26*01  4    ---------------------------------........A.....-------------------------------------------  17
J  93.0% (53/57)    IGHJ6*02     6    --------------------------------------------------.......AC.....T........................A  45

                                                       
                                      P  V  T  V  S  S 
                    Query_3941   364  CGGTCACCGTCTCCTCA  380
J  93.0% (53/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_210472

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           450     9e-129
IGHD5-18*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTATCCTC	TACAGCTATGG	GGAAGATGGA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTATCCTCTACAGCTATGGGGAAGATGGATACGGTATGGACGTC	ARGILYSYGEDGYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	289	1	0	99.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_3942   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  99.7% (289/290)  IGHV1-69*01  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q
                    Query_3942   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACA  180
V  99.7% (289/290)  IGHV1-69*01  96   ..........................................................................................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_3942   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  99.7% (289/290)  IGHV1-69*01  186  ..........................................................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  G  I  L  Y  S  Y  G  E  D  G  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_3942   271  CGTGTATTACTGTGCGAGAGGTATCCTCTACAGCTATGGGGAAGATGGATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  99.7% (289/290)  IGHV1-69*01  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (11/11)   IGHD5-18*01  6    ----------------------------...........---------------------------------------------------  16
J  100.0% (48/48)   IGHJ6*02     15   -------------------------------------------------.........................................  55

                                             
                                        S  S 
                    Query_3942   361  CTCCTCA  367
J  100.0% (48/48)   IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_26798

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           346     2e-97
IGHD3-9*01                                                                                            29.5    2e-04
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATCCAC	GTATAACGATGTTTTGACTGG	CCAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATCCACGTATAACGATGTTTTGACTGGCCATAACTGGTTCGACCCC	ARGSTYNDVLTGHNWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  L  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3943   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCATTCTCAGTAGTTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-48*03  47   ....................G...............CCT...................C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  V  R  G  T  T  I  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  H  A  
                    Query_3943   91   AGTGGGTTTCATACATTAGTGTTAGAGGTACTACCATATACTACGCAGACTCTGTGCAGGGCCGATTTACCATCTCTAGAGACCACGCCA  180
V  94.4% (235/249)  IGHV3-48*03  137  ....................AG...T....G.........................A..........C........C......A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      T  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  S  T  Y  N  D  V  
                    Query_3943   181  CGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGATCCACGTATAACGATGTTT  270
V  94.4% (235/249)  IGHV3-48*03  227  A....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD3-9*01   1    ----------------------------------------------------------------------------....T.....A...  14

                                      IMGT--------------------->                                  
                                      L  T  G  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3943   271  TGACTGGCCATAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  90.5% (19/21)    IGHD3-9*01   15   .......-----------------------------------------------------  21
J  100.0% (49/49)   IGHJ5*02     3    -----------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_26796

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           335     4e-94
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	ACCCG	TTTTGGCGTGG	CGGTGGATGCATCTCGGGCTTGAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACCCGTTTTGGCGTGGCGGTGGATGCATCTCGGGCTTGAGTGACTGC	ARDPFWRGGGCISGLSDC	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  P  F  S  G  H  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_3944   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGCCCTTCAGTGGTCACTACTGGAACTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  93.9% (229/244)  IGHV4-34*01  49   .........................A.......T...........T.........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  R  G  G  S  T  T  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_3944   91   TGGATTGGGGAAATCAATCGTGGTGGAAGCACCACCTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCTGTAGACACGTCCAAGAAC  180
V  93.9% (229/244)  IGHV4-34*01  139  ...................A.A............A.................................A..A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  F  W  R  G  G  G  C 
                    Query_3944   181  CAATTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGCGAGACCCGTTTTGGCGTGGCGGTGGATGC  270
V  93.9% (229/244)  IGHV4-34*01  229  ..G...........G....G...........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.9% (10/11)    IGHD3-3*01   11   ---------------------------------------------------------------------......A....----------  21

                                      -------------------->                                  
                                       I  S  G  L  S  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3944   271  ATCTCGGGCTTGAGTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.6% (40/41)    IGHJ4*02     8    --------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_26797

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           271     7e-75
IGHD3-3*01                                                                                            21.8    0.043
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	CCTGTCCCGCGTTATGG	TTTTTGGAATGGTT	TTTCCAAAATCTAACTCT	TTCGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCCTGTCCCGCGTTATGGTTTTTGGAATGGTTTTTCCAAAATCTAACTCTTTCGCCCCC	ARGLSRVMVFGMVFPKSNSFAP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	97	17	0	85.1
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	209	36	0	85.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  L  D  G  H  Y  W  T  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_3945   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGGTCGCTCGATGGTCACTACTGGACCTGGATACGCCAGGCCCCAGGGAAGGGACTGGAG  90
V  85.3% (209/245)  IGHV4-34*01  49   ..................G......A.........CT..AG....T.........G......C......C.............G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  Y  T  G  D  T  N  Y  N  S  S  L  K  S  R  V  G  L  S  V  D  T  S  R  N 
                    Query_3945   91   TGGATTGGGGAGATCTCTTATACTGGAGACACCAACTACAACTCCTCCCTCAAGAGTCGAGTCGGCTTGTCAGTTGACACGTCCAGGAAC  180
V  85.3% (209/245)  IGHV4-34*01  139  ...........A...AA.C...G....AG.............C.G..................AC.A.A.....A..........A....  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  T  S  L  T  G  A  D  T  G  V  Y  Y  C  A  R  G  L  S  R  V  M  V  F  G 
                    Query_3945   181  CAGTTCTCCCTGAAGTTGACCTCCCTGACCGGGGCGGACACGGGCGTCTATTACTGTGCGCGAGGCCTGTCCCGCGTTATGGTTTTTGGA  270
V  85.3% (209/245)  IGHV4-34*01  229  ...............C...G...TG......CC..........CT..G............A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  92.9% (13/14)    IGHD3-3*01   10   ----------------------------------------------------------------------------------........  17

                                      -IMGT--------------------------->                                  
                                       M  V  F  P  K  S  N  S  F  A  P  W  G  P  G  V  L  V  T  V  S  S  
                    Query_3945   271  ATGGTTTTTCCAAAATCTAACTCTTTCGCCCCCTGGGGCCCGGGAGTCCTGGTTACCGTCTCCTCAG  337
D  92.9% (13/14)    IGHD3-3*01   18   G.....-------------------------------------------------------------  23
J  88.4% (38/43)    IGHJ5*02     9    ------------------------....A...........A....AC......C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_26794

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           318     6e-89
IGHD2-8*02                                                                                            18.0    0.61 
IGHJ5*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATTGTCGGTGTTGGC	TATTGCACTGGT	AGCAGTTGTTCCCCTCCGTCT	GACGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGTCGGTGTTGGCTATTGCACTGGTAGCAGTTGTTCCCCTCCGTCTGACGCC	ARIVGVGYCTGSSCSPPSDA	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  F  S  Y  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_3946   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGGTCCTTCAGTTATTACTACTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTGGAG  90
V  91.8% (223/243)  IGHV4-34*01  49   ..................G......A................GG............C...A.............A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  D  I  N  Q  S  G  S  T  N  Y  S  P  S  L  E  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_3946   91   TGGATTGGTGACATCAATCAAAGTGGAAGCACCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCATATCAATAGACACGTCGAAGAAC  180
V  91.8% (223/243)  IGHV4-34*01  139  ........G..A........T...................A..........A....................G..........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  K  S  L  A  A  A  D  T  A  V  Y  F  C  A  R  I  V  G  V  G  Y  C  T  G 
                    Query_3946   181  CAGTTCTCCCTGAAGCTGAAGTCTTTGGCCGCCGCGGACACGGCTGTCTATTTCTGTGCGAGAATTGTCGGTGTTGGCTATTGCACTGGT  270
V  91.8% (223/243)  IGHV4-34*01  229  ...................GC...G..A...................G....A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD2-8*02   5    ------------------------------------------------------------------------------.....T......  16

                                      GT------------------------>                                
                                       S  S  C  S  P  P  S  D  A  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3946   271  AGCAGTTGTTCCCCTCCGTCTGACGCCTGGGGCCAGGGAACTCTGGTCACCGTCTCCTC  329
J  94.7% (36/38)    IGHJ5*02     12   ---------------------...C................C.................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_26795

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           339     1e-95
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAGA	TACGGTGACT	CCAGGGGGTTGTCG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAGATACGGTGACTCCAGGGGGTTGTCGTAC	ARERYGDSRGLSY	237	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	24	0	0	100
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	21	3	0	87.5
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	233	225	8	0	96.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 
                    Query_3947   12   TGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATA  101
V  96.6% (225/233)  IGHV3-33*01  64   ..........................................................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       W  Y  D  G  S  R  K  Y  Y  A  D  S  V  T  G  R  F  T  I  S  G  D  D  S  K  N  T  L  C  L 
                    Query_3947   102  TGGTACGATGGAAGTAGGAAATACTATGCAGACTCCGTGACGGGCCGATTCACCATCTCCGGAGACGATTCCAAGAACACGCTGTGTCTG  191
V  96.6% (225/233)  IGHV3-33*01  154  .....T..........AT......................A...................A.....A..................A....  243
                                       W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------CDR3-IMGT-------------->      
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  R  Y  G  D  S  R  G  L  S  Y  W  G 
                    Query_3947   192  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGAGAGATACGGTGACTCCAGGGGGTTGTCGTACTGGGGC  281
V  96.6% (225/233)  IGHV3-33*01  244  ...................................G.................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (10/10)   IGHD4-17*01  5    ---------------------------------------------------------..........-----------------------  14
J  100.0% (37/37)   IGHJ4*02     12   ---------------------------------------------------------------------------------.........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_3947   282  CAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (37/37)   IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_26792

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         346     2e-97
IGHD5-12*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGAGGAT	TGGCTACGA	GACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGACCCCCTTTGACCTC	ARAGRIGYETPFDL	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_3948     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTACTCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  94.7% (234/247)  IGHV4-38-2*02  49   ................................................T.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K 
                    Query_3948     91   GAGTGGATCGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAG  180
V  94.7% (234/247)  IGHV4-38-2*02  139  ........T.............A.........C.........A..............A........................C.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  Q  F  S  L  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  T 
                    Query_3948     181  AACCAGTTCTCGTTGAATCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGAGCGGGGAGGATTGGCTACGAGACC  270
V  94.7% (234/247)  IGHV4-38-2*02  229  ...........CC....G....G...........C...............G................-----------------------  295
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD5-12*01    11   -----------------------------------------------------------------------------.........----  19

                                        ----------->                                  
                                         P  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3948     271  CCCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.5% (42/44)    IGHJ4*02       5    --.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_26793

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           347     7e-98
IGHD2-21*02                                                                                           12.2    33   
IGHJ6*02                                                                                              104     1e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCTCGCGAAGGG	GACTGC	CCTAGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGCTCGCGAAGGGGACTGCCCTAGGTACTACTACCACGGTATGGACGTC	ARDAREGDCPRYYYHGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3949   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTCGCTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-21*01  47   ............................................A......G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  T  F  I  Y  Y  S  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3949   91   AGTGGGTCTCATCCATTAGTAGCACTAGCACTTTCATATACTACTCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  94.4% (236/250)  IGHV3-21*01  137  ......................T.G...T.G..A..........G........G...................................A  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      E  N  S  L  H  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  R  D  A  R  E  G  D  C  
                    Query_3949   181  AGAACTCTCTGCATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTTCTGTGCGAGAGATGCTCGCGAAGGGGACTGCC  270
V  94.4% (236/250)  IGHV3-21*01  227  .......A...T........................C....................A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*02  17   -----------------------------------------------------------------------------------......-  22

                                      -IMGT----------------------->                                 
                                      P  R  Y  Y  Y  H  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3949   271  CTAGGTACTACTACCACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  98.2% (56/57)    IGHJ6*02     6    -----.........T...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_26790

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGACC	TACGATTTTTGGAG	GGACC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGACCTACGATTTTTGGAGGGACCACTACTACGCTATGGACGTC	ARVTYDFWRDHYYAMDV	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  T  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_3950   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACCACTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   ...............................G........G..G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  V  Y  Y  I  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S 
                    Query_3950   91   CTGGAATGGATTGGGACTGTCTATTATATTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....G..........G.A.........G.............................A.....................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  R  L  S  S  L  T  A  A  D  T  A  V  Y  H  C  A  R  V  T  Y  D  F  W  R 
                    Query_3950   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTTTGACCGCCGCAGACACGGCTGTCTATCACTGTGCGAGGGTGACCTACGATTTTTGGAGG  270
V  94.8% (235/248)  IGHV4-39*01  229  ...................A..........G......................G...T..........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (14/14)   IGHD3-3*01   5    ---------------------------------------------------------------------------..............-  18

                                      MGT-------------------->                                 
                                       D  H  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_3950   271  GACCACTACTACGCTATGGACGTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  327
J  94.3% (50/53)    IGHJ6*02     10   ----.........G..................A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_26791

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           10.3    132   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_3951   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  95.2% (276/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  F  A  Q 
                    Query_3951   92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTTTGCACAG  181
V  95.2% (276/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_3951   182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_3951   272  ATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  95.2% (276/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_134662

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           341     6e-96
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGCTGTGGTATTC	TGATAGTGGTGGTTATT	CGGGAGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATGGGCTGTGGTATTCTGATAGTGGTGGTTATTCGGGAGGCTACTTTGACTAC	VRDGLWYSDSGGYSGGYFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  L  F  S  T  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3952   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTTGTTCAGTACTTATGAGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-48*03  47   ...................................ACC.......G......A.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  S  R  T  D  N  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3952   91   AGTGGGTTTCATTCATTAGTAGGACTGATAATACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.6% (234/250)  IGHV3-48*03  137  ............A.........T.G..G..G...........................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  R  S  L  Y  L  Q  M  D  N  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  G  L  W  Y  S  D  
                    Query_3952   181  AGAGATCACTGTATCTGCAAATGGACAACTTGAGAGCCGAGGACACGGCTGTTTATTACTGTGTGAGAGATGGGCTGTGGTATTCTGATA  270
V  93.6% (234/250)  IGHV3-48*03  227  ...AC..................A...G.C.................................C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  94.1% (16/17)    IGHD3-22*01  10   -------------------------------------------------------------------------------------.....  14

                                      R3-IMGT------------------------>                                  
                                      S  G  G  Y  S  G  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3952   271  GTGGTGGTTATTCGGGAGGCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  94.1% (16/17)    IGHD3-22*01  15   ..A.........------------------------------------------------------  26
J  100.0% (47/47)   IGHJ4*02     2    -------------------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_134660

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            327     9e-92
IGHD3-10*01                                                                                           12.2    31   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TTAAGGGAAGTA	GTTCGTCGACTTATT	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTAAGGGAAGTAGTTCGTCGACTTATTACTGGTTCGACCCC	VKGSSSSTYYWFDP	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	241	1	1	0	0	100
Total	N/A	N/A	241	225	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  L  V  S  G  G  S  I  T  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_3953   1    ACCCTGTCCCTCACCTGCCTTGTCTCTGGTGGGTCCATTACCAGTAGTAACTGGTGGTCTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.4% (225/241)  IGHV4-4*02   49   ..................GC............C.....C.G................AG...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  A  D  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  K 
                    Query_3953   91   GAGTGGATTGCGGATATCTATTATAGTGGGAGCACCAATTACAACCCGTCCCTGAAGAGTCGAGTCACCATCTCATTAGACAAGTCCAAG  180
V  93.4% (225/241)  IGHV4-4*02   139  ..........G...A......C................C..............C.................A...G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  K  G  S  S  S  S  T  Y  Y 
                    Query_3953   181  AACCAGTTCTCCCTGAAACTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGTTAAGGGAAGTAGTTCGTCGACTTATTAC  270
V  93.4% (225/241)  IGHV4-4*02   229  .................G......................................C....-----------------------------  289
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  80.0% (12/15)    IGHD3-10*01  12   -------------------------------------------------------------------------.....GG..G.....--  26
J  95.8% (46/48)    IGHJ5*02     4    ----------------------------------------------------------------------------------------..  5

                                      ----------->                                  
                                       W  F  D  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3953   271  TGGTTCGACCCCTGGGGCCGGGGAACCCTGGTCACTGTCTCCTCAG  316
J  95.8% (46/48)    IGHJ5*02     6    ...................A...............C..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_134665

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           375     3e-106
IGHD3-3*01                                                                                            33.4    1e-05 
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTAAA	ACGATTTTTGGAGTTGTTAT	CCATTTGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTAAAACGATTTTTGGAGTTGTTATCCATTTGGGCTACTTTGACTAC	AKVKTIFGVVIHLGYFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	29	28	27	1	0	96.4
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	248	244	4	0	98.4


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E
                    Query_3954   2    GTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGA  91
V  98.4% (244/248)  IGHV3-23*01  48   ....................C.....................................................................  137
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E

                                      ------------><-------CDR2-IMGT------><----------------------------------------------------
                                        W  V  S  A  I  S  G  S  G  D  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K
                    Query_3954   92   GTGGGTCTCAGCTATTAGTGGTAGTGGTGATAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAA  181
V  98.4% (244/248)  IGHV3-23*01  138  .............................G............................................................  227
                                        W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K

                                      FR3-IMGT----------------------------------------------------><----------------------CDR3-I
                                        N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  V  K  T  I  F  G  V  V
                    Query_3954   182  GAACACCCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTTAAAACGATTTTTGGAGTTGT  271
V  98.4% (244/248)  IGHV3-23*01  228  ......G....A........................................................----------------------  295
                                        N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                        
D  95.0% (19/20)    IGHD3-3*01   6    -------------------------------------------------------------------------..............G..  22

                                      MGT--------------------->                                  
                                        I  H  L  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3954   272  TATCCATTTGGGCTACTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  330
D  95.0% (19/20)    IGHD3-3*01   23   ...--------------------------------------------------------  25
J  97.9% (46/47)    IGHJ4*02     2    ------------..............................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_134664

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           274     7e-76
IGHD1-20*01                                                                                           14.1    8.0  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGAATACAA	GTATAAC	GGAATAGGG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGAATACAAGTATAACGGAATAGGGATGGACGTC	TRSEYKYNGIGMDV	227	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	16	5	4	1	0	80
CDR1-IMGT	17	40	24	20	4	0	83.3
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	112	21	18	3	0	85.7
FR3-IMGT	113	226	114	102	12	0	89.5
CDR3-IMGT (germline)	227	232	6	5	1	0	83.3
Total	N/A	N/A	221	198	23	0	89.6


Alignments

                                      <FR1><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-----CDR2
                                         S  G  F  T  E  S  R  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  
                    Query_3955   12   CCTCGGGGTTCACCGAAAGTAGGAATTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGGAGTGGGTCTCAGTTATCTATAGTG  101
V  89.6% (198/221)  IGHV3-53*01  71   ....T..........TC.....C..C.......G...........................G....................T.....C.  160
                                         S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  

                                      -IMGT-----><----------------------------------------------------FR3-IMGT------------------
                                      G  G  T  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  M  T  T  L  F  L  Q  M  N  
                    Query_3955   102  GTGGTACCACACACTACGCAGATTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCATGACCACATTGTTTCTTCAAATGAACA  191
V  89.6% (198/221)  IGHV3-53*01  161  ......G....T..........C..C...........A.........................A..A...GC...A..............  250
                                      G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  

                                      ----------------------------------><----------------CDR3-IMGT--------------->             
                                      S  L  R  A  E  D  S  A  V  Y  Y  C  T  R  S  E  Y  K  Y  N  G  I  G  M  D  V  W  G  Q  G  
                    Query_3955   192  GTTTGAGAGCCGAGGACTCGGCCGTGTATTACTGTACGAGATCAGAATACAAGTATAACGGAATAGGGATGGACGTCTGGGGCCAAGGGA  281
V  89.6% (198/221)  IGHV3-53*01  251  .CC..............A.................G.....-------------------------------------------------  291
                                      S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                  
D  100.0% (7/7)     IGHD1-20*01  2    ----------------------------------------------------.......-------------------------------  8
J  100.0% (42/42)   IGHJ6*02     21   --------------------------------------------------------------------......................  42

                                                          
                                      T  T  V  T  V  S  S 
                    Query_3955   282  CCACGGTCACCGTCTCCTCA  301
J  100.0% (42/42)   IGHJ6*02     43   ....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_134669

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           321     6e-90
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_3956   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  L  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_3956   91   TGGATTGCGTATCTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_3956   181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.8% (225/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_3956   271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_134668

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           332     4e-93
IGHD1-20*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGATTTGGCA	ATAACTGG	GCCCACTCGAGAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGATTTGGCAATAACTGGGCCCACTCGAGAGTACTATGGTTTGGACGTC	ARDDLAITGPTREYYGLDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  N  W  I  R  Q  A  P  G  K  G  L  
                    Query_3957   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAACTGGATCCGGCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-11*01  47   .........................................................G.........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  M  S  S  S  G  S  I  I  K  Y  A  D  S  V  E  G  R  F  V  M  S  R  D  N  A  
                    Query_3957   91   AGTGGGTCTCACACATGAGTAGTAGTGGTAGTATCATAAAGTATGCAGACTCTGTGGAGGGCCGATTCGTCATGTCCAGGGACAACGCCG  180
V  92.4% (231/250)  IGHV3-11*01  137  .......T...T....T................C....T.C..C............A...........AC...C...............A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      E  N  S  L  Y  L  Q  M  T  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  D  L  A  I  T  G  
                    Query_3957   181  AAAACTCACTGTATCTGCAAATGACCAGTCTAAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAGAGACGATTTGGCAATAACTGGGC  270
V  92.4% (231/250)  IGHV3-11*01  227  .G......................A...C..G....................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-20*01  4    --------------------------------------------------------------------------------........--  11

                                      -IMGT----------------------->                                 
                                      P  T  R  E  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3957   271  CCACTCGAGAGTACTATGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  96.1% (49/51)    IGHJ6*02     12   -----------.....C...A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_210478

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           329     3e-92
IGHD1-1*01                                                                                            14.1    8.4  
IGHJ3*01                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGG	CAACTGG	CGCCGAAGCCGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGGCAACTGGCGCCGAAGCCGGTGCTTTAGATGTC	ARDPATGAEAGALDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  R  K  Y  A  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3958   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTCCGCAAATATGCTCTGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  92.0% (230/250)  IGHV3-64*01  47   ......................................T..A.T.GC......A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  G  I  S  G  D  G  G  T  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_3958   91   AATTTGTTTCAGGTATCAGTGGTGATGGGGGGACCACTTATTATGCAAACTCTGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-64*01  137  ...A........C...T...A..A.......T.G...A....................................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  V  G  R  L  R  L  E  D  M  G  V  Y  Y  C  A  R  D  P  A  T  G  A  E  
                    Query_3958   181  AGAACACGCTGTATCTTCAAGTGGGCAGACTGAGACTTGAGGACATGGGTGTTTATTACTGTGCGAGAGATCCGGCAACTGGCGCCGAAG  270
V  92.0% (230/250)  IGHV3-64*01  227  ....................A.......C......GC...........C...G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------------------------------------------------------.......--------  11

                                      ---------------->                                  
                                      A  G  A  L  D  V  W  G  E  G  T  V  V  T  V  S  P  
                    Query_3958   271  CCGGTGCTTTAGATGTCTGGGGCGAAGGGACAGTGGTCACCGTGTCTCCAG  321
J  89.4% (42/47)    IGHJ3*01     4    ----......T............C........A..........C...T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_179518

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           310     1e-86
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAAG	AGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQEWLPGDWYFDL	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	220	22	0	90.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  D  S  I  T  R  N  Y  W  S  W  I  R  Q  P  P  G  E  R  L  E  
                    Query_3959   4    CCCTGAGACTCTCCTGTAGTGTCTCTGGTGACTCCATCACTAGAAACTACTGGAGCTGGATTCGGCAGCCCCCAGGGGAGAGACTGGAGT  93
V  90.9% (220/242)  IGHV4-59*08  50   .....TCC...A....C.C...........G........G...TT................C...............A..G.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N  
                    Query_3959   94   GGATAGCGTATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAACC  183
V  90.9% (220/242)  IGHV4-59*08  140  ....T.G.......T...........AG...........................................G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  F  L  P  A  V  Q  E  W  L  
                    Query_3959   184  AGTTCTCCCTGAAGATGACCTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTGC  273
V  90.9% (220/242)  IGHV4-59*08  230  ..............C...G.........................G.................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD6-19*01  10   ---------------------------------------------------------------------------------........-  17

                                      ---------------------->                                  
                                      P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_3959   274  CAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCGTCAG  330
J  96.1% (49/51)    IGHJ2*01     3    ------......................................A.......C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_313686

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           341     5e-96
IGHD2-15*01                                                                                           10.3    121  
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	T	GCTGC	GCTGTACGAAGAGG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGCTGCGCTGTACGAAGAGGACAACTGGTTCGACCCC	AKDAALYEEDNWFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  N  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3960   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAATAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-30*18  47   ....................................C.....G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  R  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_3960   91   AGTGGGTGGCAGTTATCTCATATGATGGAAGGAAGAAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCG  180
V  93.6% (234/250)  IGHV3-30*18  137  ................A..............T..T.....C...........................................A....A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  T  V  N  L  E  M  N  S  L  R  I  E  D  T  A  V  Y  Y  C  A  K  D  A  A  L  Y  E  E  
                    Query_3960   181  AGAACACGGTGAATCTGGAAATGAATAGCCTGAGAATTGAGGACACGGCTGTTTATTACTGTGCGAAAGATGCTGCGCTGTACGAAGAGG  270
V  93.6% (234/250)  IGHV3-30*18  227  ........C..T.....C.......C.........GC...............G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD2-15*01  21   -----------------------------------------------------------------------.....--------------  25

                                      ---------------->                                
                                      D  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3960   271  ACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
J  100.0% (49/49)   IGHJ5*02     1    .................................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_257342

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3961   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_3961   91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*01  139  ........GT........T.......G...............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_3961   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.5% (234/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3961   271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_257343

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*14                                                                                           336     2e-94
IGHD2-21*01                                                                                           25.7    0.003
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*14	IGHD2-21*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCGCGCAAAC	TGTGGTGGTGAGTGCT	TCGCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGCGCAAACTGTGGTGGTGAGTGCTTCGCATTTGATGTC	ARRANCGGECFAFDV	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	70	5	0	93.3
CDR1-IMGT	79	102	24	16	8	0	66.7
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	96	18	0	84.2
CDR3-IMGT (germline)	292	296	5	5	0	0	100
Total	N/A	N/A	293	254	39	0	86.7


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  Q  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  I  F  K 
                    Query_3962   4    CAGGTCCAGCTTGTGCAGTCTGGAGCTCAGGTGAAGAAGCCTGGGTCGTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGACATCTTCAAA  93
V  86.7% (254/293)  IGHV1-69*14  1    ...........G...........G...G...................C.......................T.......G..C.....GC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  T  V  I  N  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  G  I  S  P  L  F  G  T  A  T  Y 
                    Query_3962   94   AACACTGTTATCAACTGGGTGCGACAGGCCCCCGGACAGGGGCCTGAGTGGATGGGAGGGATCAGCCCTCTCTTTGGCACAGCTACTTAT  183
V  86.7% (254/293)  IGHV1-69*14  91   .G.TA..C.....G..................T.....A....T....................T....A.......T.....A.AC..C  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       P  Q  K  F  Q  D  R  V  I  I  T  A  D  K  S  T  S  T  D  Y  L  E  L  S  T  L  R  S  E  D 
                    Query_3962   184  CCACAGAAGTTTCAGGACAGAGTCATCATTACCGCGGACAAATCCACGAGCACAGACTACTTGGAACTGAGTACACTGAGATCTGAAGAC  273
V  86.7% (254/293)  IGHV1-69*14  181  G..........C....G........CG............................C....A....G.....C.GC...........G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  R  R  A  N  C  G  G  E  C  F  A  F  D  V  W  G  Q  G  T  T  V  I  V 
                    Query_3962   274  ACGGCCGTCTACTATTGTGCGAGGCGCGCAAACTGTGGTGGTGAGTGCTTCGCATTTGATGTCTGGGGCCAAGGGACAACGGTCATCGTC  363
V  86.7% (254/293)  IGHV1-69*14  271  ........G..T..C........-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  93.8% (15/16)    IGHD2-21*01  8    ---------------------------------...........T....-----------------------------------------  23
J  93.0% (40/43)    IGHJ3*01     8    ------------------------------------------------------.........................T.....C....  43

                                             
                                       T  S  
                    Query_3962   364  ACTTCAG  370
J  93.0% (40/43)    IGHJ3*01     44   T......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_257340

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            335     4e-94
IGHD6-25*01                                                                                           10.3    116  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	GGCT	CAGCG	ACAAAACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCAGCGACAAAACCACTTTGACTTC	AAQRQNHFDF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  S  D  Y  G  M  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_3963   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTAGTGATTATGGCATGCAGTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  93.9% (229/244)  IGHV3-9*01   47   ................................T........GA........C......C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  S  N  S  G  N  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3963   91   AGTGGGTCTCAGGTATTAGTTCGAATAGTGGTAATACAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.9% (229/244)  IGHV3-9*01   137  .....................G...........GC.T.....................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  G  E  D  S  A  L  Y  Y  C  A  A  Q  R  Q  N  H  F  D  
                    Query_3963   181  AGAAGTCCCTGTATCTACAAATGAACAGTTTGAGAGGTGAGGACTCGGCCTTATATTACTGTGCGGCTCAGCGACAAAACCACTTTGACT  270
V  93.9% (229/244)  IGHV3-9*01   227  ....C...........G............C......C.......A.......G...........--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (5/5)     IGHD6-25*01  9    --------------------------------------------------------------------.....-----------------  13
J  91.1% (41/45)    IGHJ4*02     4    ---------------------------------------------------------------------------------.........  12

                                      ->                                  
                                      F  W  G  L  G  T  L  V  S  V  S  S  
                    Query_3963   271  TCTGGGGCCTGGGAACTCTGGTCTCCGTCTCCTCAG  306
J  91.1% (41/45)    IGHJ4*02     13   A........A......C......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_257341

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           297     7e-83
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GATAG	N/A	N/A	GTGCGGGATGGCAACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGATAGGTGCGGGATGGCAACCTGACTAC	VIGAGWQPDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	5	2	0	71.4
Total	N/A	N/A	244	217	27	0	88.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  S  G  Y  Y  L  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3964   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTGAGTGGTTATTATTTGAACTGGATCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  88.9% (217/244)  IGHV4-59*01  49   ....................................A.C...A....C..C.G..G.........G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  L  I  S  Y  T  G  S  T  N  Y  N  P  S  L  Q  S  R  V  I  I  S  V  D  T  S  K  N 
                    Query_3964   91   TGGCTTGGTTTAATCTCTTACACCGGGAGTACCAACTACAACCCCTCCCTCCAGAGTCGAGTCATCATATCGGTAGACACGTCCAAGAAC  180
V  88.9% (217/244)  IGHV4-59*01  139  ...A....G.AT....A.....GT.....C.....................A............C......A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  V  I  G  A  G  W  Q  P  D  Y  W 
                    Query_3964   181  CAGTTCTCCCTGAGGTTGAGCTCTGTGACCGCTGCGGACACGGCCCTATATTATTGTGTGATAGGTGCGGGATGGCAACCTGACTACTGG  270
V  88.9% (217/244)  IGHV4-59*01  229  .............A.C.............................G.G.....C....C..G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  95.1% (39/41)    IGHJ4*02     8    --------------------------------------------------------------------------------..........  17

                                                                     
                                       G  P  G  T  L  V  T  V  S  S  
                    Query_3964   271  GGCCCGGGAACGCTGGTCACCGTCTCCTCAG  301
J  95.1% (39/41)    IGHJ4*02     18   ....A......C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_323564

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGTC	GTATTATTTTGATAGTAGTGGT	CAGAGTCCCGCG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGTCGTATTATTTTGATAGTAGTGGTCAGAGTCCCGCGTACTTTGACTAC	ARDLSYYFDSSGQSPAYFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3965   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  C  I  S  G  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3965   91   AGTGGGTCTCATGCATCAGTGGTGGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  ............C...T...A..A..................................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  S  Y  Y  F  D  
                    Query_3965   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGTCGTATTATTTTGATA  270
V  98.4% (246/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (20/22)    IGHD3-22*01  1    ----------------------------------------------------------------------------......C.A.....  14

                                      R3-IMGT------------------------>                                  
                                      S  S  G  Q  S  P  A  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_3965   271  GTAGTGGTCAGAGTCCCGCGTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  336
D  90.9% (20/22)    IGHD3-22*01  15   ........----------------------------------------------------------  22
J  97.8% (45/46)    IGHJ4*02     3    --------------------........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_257347

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            386     1e-109
IGHD3-10*01                                                                                           14.1    8.7   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TCGGGGA	CTCCTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATCGGGGACTCCTGTTTGACTTC	ARDRGLLFDF	269	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	41	4	0	91.1
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	154	27	26	1	0	96.3
FR3-IMGT	155	268	114	107	7	0	93.9
CDR3-IMGT (germline)	269	276	8	8	0	0	100
Total	N/A	N/A	275	261	14	0	94.9


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  G  I  S  G  D  S  V  S  S  D  T  A  A  W  N  W  I  R 
                    Query_3966   2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGGCATCTCCGGGGACAGTGTCTCTAGCGACACTGCTGCTTGGAACTGGATCAGG  91
V  94.9% (261/275)  IGHV6-1*01   31   ........G...T.G......................C.........................A...G......................  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  K  S  K  W  Y  N  D  Y  A  V  S  V  K  G  R 
                    Query_3966   92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAAGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAGGGTCGA  181
V  94.9% (261/275)  IGHV6-1*01   121  ..............................................G....................................AA.....  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  I  N  S  D  T  S  K  N  Q  F  S  L  H  L  N  S  M  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_3966   182  ATAACCATCAACTCAGACACATCCAAGAACCAGTTCTCCCTGCACCTGAACTCTATGACTCCCGAGGACACGGCTGTATACTACTGTGCA  271
V  94.9% (261/275)  IGHV6-1*01   211  ............C...............................G.........G......................G..T.........  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------CDR3-IMGT--------->                                  
                                       R  D  R  G  L  L  F  D  F  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_3966   272  AGAGATCGGGGACTCCTGTTTGACTTCTGGGGCCAGGGAATCCTGGTCACCGTCTCGTCAG  332
V  94.9% (261/275)  IGHV6-1*01   301  .....--------------------------------------------------------  305
                                       R                                                           
D  100.0% (7/7)     IGHD3-10*01  14   -----.......-------------------------------------------------  20
J  93.0% (40/43)    IGHJ4*02     6    ------------------.......A..............C...............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_257344

Length=412
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           389     2e-110
IGHD3-3*01                                                                                            46.8    1e-09 
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGAGCTTGAC	TTACGATTTTTGGAGTGGTTATTA	CCCGACC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGAGCTTGACTTACGATTTTTGGAGTGGTTATTACCCGACCACTACTACTACGCTATGGACGTC	ARGELDLRFLEWLLPDHYYYAMDV	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  T  H 
                    Query_3967   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTTCCACTCAC  91
V  93.1% (269/289)  IGHV1-18*04  7    .................................................................................A...GCT..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  K  K  S  I  T  K  Y  A  Q 
                    Query_3967   92   GGTATTAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGCTAAGAAAAGTATCACAAAGTATGCACAG  181
V  93.1% (269/289)  IGHV1-18*04  97   .....C.............................G...........................T.C..TG...A......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  R  D  R  V  T  M  T  T  D  T  S  T  T  T  V  Y  M  E  L  R  S  L  R  S  D  D  A  A 
                    Query_3967   182  AAGTTCCGAGACAGAGTCACCATGACCACAGACACATCCACGACCACAGTCTACATGGAACTGAGGAGCCTGAGATCTGACGACGCGGCC  271
V  93.1% (269/289)  IGHV1-18*04  187  ...C...AG.G................................G.....C.........G........................A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------------CDR3-IMGT------------------------------>      
                                       V  Y  Y  C  A  R  G  E  L  D  L  R  F  L  E  W  L  L  P  D  H  Y  Y  Y  A  M  D  V  W  G 
                    Query_3967   272  GTGTATTACTGTGCGAGAGGGGAGCTTGACTTACGATTTTTGGAGTGGTTATTACCCGACCACTACTACTACGCTATGGACGTCTGGGGC  361
V  93.1% (269/289)  IGHV1-18*04  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (24/24)   IGHD3-3*01   4    ------------------------------........................------------------------------------  27
J  98.2% (55/56)    IGHJ6*02     7    -------------------------------------------------------------............G................  35

                                                                 
                                       Q  G  T  T  V  T  V  S  S 
                    Query_3967   362  CAAGGGACCACGGTCACCGTCTCCTCA  388
J  98.2% (55/56)    IGHJ6*02     36   ...........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40393728


Query= Query_257345

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           286     1e-79
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCAGC	ATACATCTCTGGT	CACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAGCATACATCTCTGGTCACCCCTAC	SAYISGHPY	240	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	102	12	0	89.5
Total	N/A	N/A	239	211	28	0	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  V  S  V  H  Y  M  S  W  V  R  Q  A  P  G  R  G  L  
                    Query_3968   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCGTCAGTGTACACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAGGGGACTGG  90
V  88.3% (211/239)  IGHV3-53*01  47   ...............................G...A........AGCA.................................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  L  T  S  G  K  T  Y  Y  T  D  S  A  M  G  R  F  T  I  S  R  D  S  S  K  
                    Query_3968   91   AGTGGGTCTCAGCGATTCTTACCAGTGGTAAGACATACTACACAGACTCCGCGATGGGCCGATTCACCATCTCCAGAGACTCTTCCAAGA  180
V  88.3% (211/239)  IGHV3-53*01  137  ............TT...TA..G.G......GC.........G.........T..A.........................AA........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->    
                                      N  T  V  N  L  Q  M  N  S  L  S  A  G  D  T  A  F  Y  Y  C  S  A  Y  I  S  G  H  P  Y  W  
                    Query_3968   181  ACACAGTGAATCTTCAAATGAACAGCCTGAGCGCCGGGGACACGGCCTTCTATTACTGTTCAGCATACATCTCTGGTCACCCCTACTGGG  270
V  88.3% (211/239)  IGHV3-53*01  227  ....GC..T......................A....A..........G.G.........-------------------------------  285
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                                
D  84.6% (11/13)    IGHD5-18*01  5    ----------------------------------------------------------------.....G..A....-------------  17
J  100.0% (38/38)   IGHJ4*02     11   ----------------------------------------------------------------------------------........  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_3968   271  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  300
J  100.0% (38/38)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_257348

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            363     1e-102
IGHD1-20*01                                                                                           14.1    8.6   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTAAACCGGGATCGT	GGTATAA	AGGCTACG	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAAACCGGGATCGTGGTATAAAGGCTACGACTGCTTTGACTAC	ARLKPGSWYKGYDCFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  I  H  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3969   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGGGATCCATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (240/248)  IGHV3-7*01   47   .........................................A.T.G.T.........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  T  Y  Y  V  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3969   91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGAGACATACTATGTGGACTCTTTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (240/248)  IGHV3-7*01   137  ....................C...............A................G....................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  L  K  P  G  S  W  Y  
                    Query_3969   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGACTTAAACCGGGATCGTGGTATA  270
V  96.8% (240/248)  IGHV3-7*01   227  ....................................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-20*01  1    ------------------------------------------------------------------------------------......  6

                                      GT-------------------->                                  
                                      K  G  Y  D  C  F  D  Y  W  G  P  G  T  L  V  S  V  S  S  
                    Query_3969   271  AAGGCTACGACTGCTTTGACTACTGGGGCCCGGGAACCCTGGTCAGCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD1-20*01  7    .--------------------------------------------------------  7
J  93.8% (45/48)    IGHJ4*02     1    ---------...A.................A..............C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_1556

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           329     3e-92
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTAGGATCCCGAAAAATCT	CTATGATAATAGTGGTTA	CTTCTTTTTCGCCTTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAGGATCCCGAAAAATCTCTATGATAATAGTGGTTACTTCTTTTTCGCCTTTTTTGAATCC	ARLRIPKNLYDNSGYFFFAFFES	244	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  V  S  S  N  N  F  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_3970   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCGTCTCCAGTAATAATTTCTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  92.0% (230/250)  IGHV4-39*01  49   ...................C................A..AG.....G..G..A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  A  D  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  L  V  D  T  S 
                    Query_3970   91   CTGGAGTGGATTGGGAGTGCCGATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTTGGTGGACACGTCC  180
V  92.0% (230/250)  IGHV4-39*01  139  ..................AT.T....T...............................................A.CC..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       R  D  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  R  I  P  K  N  L 
                    Query_3970   181  AGGGACCAGTTCTCCCTAAAGTTGAGCTCTGTGACCGCCGCAGACACGGCTCTGTATTACTGTGCGAGACTTAGGATCCCGAAAAATCTC  270
V  92.0% (230/250)  IGHV4-39*01  229  .A.A.............G...C.............................G..................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-22*01  7    -----------------------------------------------------------------------------------------.  7

                                      ---CDR3-IMGT----------------------------->                                  
                                       Y  D  N  S  G  Y  F  F  F  A  F  F  E  S  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_3970   271  TATGATAATAGTGGTTACTTCTTTTTCGCCTTTTTTGAATCCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  346
D  94.4% (17/18)    IGHD3-22*01  8    .......G.........-----------------------------------------------------------  24
J  93.0% (40/43)    IGHJ4*02     6    ---------------------------------.....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_287466

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            346     2e-97
IGHD3-10*01                                                                                           10.3    115  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GA	TCGGG	ATGGCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGATCGGGATGGCTCCCTGACTAC	VGGSGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  N  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3971   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGTAACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-7*01   47   ....................................C........G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  K  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  S  D  N  A  
                    Query_3971   91   AGTGGGTGGCCAACATAAAGAAAGATGGAAGCGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGCGACAACGCCA  180
V  94.4% (235/249)  IGHV3-7*01   137  ....................C..........T......T........................................A..........  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  D  I  L  R  V  E  E  T  A  V  Y  Y  C  V  G  G  S  G  W  L  P  D  
                    Query_3971   181  AGAACTCACTGTATCTGCAGATGGACATCCTGAGAGTCGAGGAAACGGCTGTGTATTACTGTGTGGGAGGATCGGGATGGCTCCCTGACT  270
V  94.4% (235/249)  IGHV3-7*01   227  ...................A...A...G........C......C...................C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   -----------------------------------------------------------------------.....--------------  18
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  A  S  S  
                    Query_3971   271  ACTGGGGCCAGGGAACCCTGGTCACCGCCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   ...........................T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_287467

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGATGGCCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTC	VRQSSDGRTKYGMDV	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	110	4	0	96.5
CDR3-IMGT (germline)	292	299	8	7	1	0	87.5
Total	N/A	N/A	295	281	14	0	95.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  
                    Query_3972   5    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCA  94
V  95.3% (281/295)  IGHV5-51*01  2    ....G...................................C.......................................AG........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  T  G  L  E  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  
                    Query_3972   95   GTTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGTGGATGGGGATCATCTTTCCGGATGACTCTGATACCAGATACA  184
V  95.3% (281/295)  IGHV5-51*01  92   .C..................................A..........................A...T.G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_3972   185  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACA  274
V  95.3% (281/295)  IGHV5-51*01  182  ................................................G.....................C...................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                           
                                      T  A  K  Y  Y  C  V  R  Q  S  S  D  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_3972   275  CCGCCAAGTATTATTGTGTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  363
V  95.3% (281/295)  IGHV5-51*01  272  ......T......C....C......----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                   
J  100.0% (42/42)   IGHJ6*02     15   -----------------------------------------------..........................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_287465

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           346     2e-97
IGHD3-10*01                                                                                           21.8    0.045
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TCAGCCCCGGAGATGGG	ACTCTGGTTCGGGG	CCCCGGAGATGGGACTATGGTTCGAAGAAGGGGCAG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGCCCCGGAGATGGGACTCTGGTTCGGGGCCCCGGAGATGGGACTATGGTTCGAAGAAGGGGCAGCTACGATCTGGACGTC	VSPGDGTLVRGPGDGTMVRRRGSYDLDV	243	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  C  Y  M  N  W  I  R  Q  A  P  G  K  G  L  
                    Query_3973   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTGCTACATGAACTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.5% (232/243)  IGHV3-11*01  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  G  R  S  G  R  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3973   91   AGTGGATTTCGTACATTGGTCGCAGTGGTAGAACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  95.5% (232/243)  IGHV3-11*01  137  .....G....A......A..A.T........T..........................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  S  P  G  D  G  T  L  V  
                    Query_3973   181  AGAACTCACTTTATCTGCAAATGAACAGCCTGAGAGCCGATGACACGGCCGTCTATTACTGTGTCAGCCCCGGAGATGGGACTCTGGTTC  270
V  95.5% (232/243)  IGHV3-11*01  227  ..........G.............................G...........G..........---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  92.9% (13/14)    IGHD3-10*01  6    --------------------------------------------------------------------------------...A......  15

                                      ----------CDR3-IMGT------------------------------------>                                 
                                      R  G  P  G  D  G  T  M  V  R  R  R  G  S  Y  D  L  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_3973   271  GGGGCCCCGGAGATGGGACTATGGTTCGAAGAAGGGGCAGCTACGATCTGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  359
D  92.9% (13/14)    IGHD3-10*01  16   ....-------------------------------------------------------------------------------------  19
J  93.9% (46/49)    IGHJ6*02     14   ----------------------------------------.....G.A.......................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_287462

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           21.8    0.041
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCGTAAAGGG	GGTTATTACTA	T	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCGTAAAGGGGGTTATTACTATCTACTACTACTACAATATGGACGTC	ARTVKGVITIYYYYNMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	25	1	0	96.2
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	242	230	12	0	95


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_3974   2    CCCTGTCCCTCACCTGCGCCGTCTATGGTGGGTCTTTCAGTGGTTACTACTGGACTTGGATCCGCCAACCCCCAGGGAAGGGGCTGGAGT  91
V  95.0% (230/242)  IGHV4-34*01  50   ...................T..............C...................GC...........G......................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  L  S  G  R  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N  
                    Query_3974   92   GGATTGGCGAAATCAATCTTAGTGGAAGAACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAATC  181
V  95.0% (230/242)  IGHV4-34*01  140  .......G..........A.........C..........................................G................C.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  I  Y  
                    Query_3974   182  AGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAACCGTAAAGGGGGTTATTACTATCTACT  271
V  95.0% (230/242)  IGHV4-34*01  230  ............A.................................G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (11/11)   IGHD3-22*01  20   -------------------------------------------------------------------------...........------  30
J  96.6% (56/58)    IGHJ6*02     5    -------------------------------------------------------------------------------------.....  9

                                      ------------------->                                 
                                      Y  Y  Y  N  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3974   272  ACTACTACAATATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  96.6% (56/58)    IGHJ6*02     10   ........GG...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_287463

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           413     2e-117
IGHD6-19*01                                                                                           18.0    0.67  
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAATGGCT	AATACGGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAATGGCTAATACGGGGGACTACTTTGACTAC	ARRIAMANTGDYFDY	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	71	0	0	100
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	106	8	0	93
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  
                    Query_3975   6    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCT  95
V  95.5% (277/290)  IGHV5-51*03  5    ..............................................................................G...........  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  
                    Query_3975   96   ACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCC  185
V  95.5% (277/290)  IGHV5-51*03  95   .........G.......................A...................................A....G.....A.........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  
                    Query_3975   186  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCG  275
V  95.5% (277/290)  IGHV5-51*03  185  ..............................................C...........G...............A.....T.........  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------CDR3-IMGT----------------->                               
                                      A  V  Y  Y  C  A  R  R  I  A  M  A  N  T  G  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_3975   276  CCGTCTATTACTGCGCGAGACGAATAGCAATGGCTAATACGGGGGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  365
V  95.5% (277/290)  IGHV5-51*03  275  ..A.G........T......----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD6-19*01  5    -----------------------......G.....-------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ---------------------------------------------.............................................  45

                                         
                                      S  
                    Query_3975   366  CAG  368
J  100.0% (48/48)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_186252

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGCCTTCTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTTCTCTTACTACGGTATGGACGTC	AREAFSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3976   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_3976   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  F  S  Y  Y  G  M  D 
                    Query_3976   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTTCTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  96.1% (49/51)    IGHJ6*02     12   ---------------------------------------------------------------------------...............  26

                                      -->                                 
                                       V  W  G  Q  G  S  T  V  I  V  S  S 
                    Query_3976   271  GTCTGGGGCCAAGGGTCCACGGTCATCGTCTCCTCA  306
J  96.1% (49/51)    IGHJ6*02     27   ...............A.........C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_9183

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           344     6e-97
IGHD2-15*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGCCCGCTGCCC	GTGGTGGCTG	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGATCAGCCCGCTGCCCGTGGTGGCTGCTTTGACTAC	TRDQPAARGGCFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  N  Y  W  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_3977   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTAACTACTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-74*01  47   ....................G........................G..........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  P  G  G  S  S  T  S  Y  A  A  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_3977   91   TGTGGGTCTCACGAATTAATCCTGGTGGGAGTAGCACAAGCTACGCGGCCTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATGCCA  180
V  94.0% (235/250)  IGHV3-74*01  137  .............T......AG..A.......................A......................A.............C....  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  G  D  T  A  L  Y  Y  C  T  R  D  Q  P  A  A  R  G  
                    Query_3977   181  AGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGTCGGGGACACGGCTCTTTATTACTGTACAAGAGATCAGCCCGCTGCCCGTGGTG  270
V  94.0% (235/250)  IGHV3-74*01  227  ....................................C..A..........G.G.........G.......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD2-15*01  15   ------------------------------------------------------------------------------------.....A  20

                                      ------------->                                  
                                      G  C  F  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_3977   271  GCTGCTTTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  318
D  90.0% (9/10)     IGHD2-15*01  21   ....--------------------------------------------  24
J  97.7% (43/44)    IGHJ4*02     5    ----.................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_186251

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           346     2e-97
IGHD5-12*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATGAG	N/A	TGGATATA	TGTATGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ATGAGTGGATATATGTATGGTTTTGACTAC	MSGYMYGFDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	3	2	0	60
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  I  L  E  M  N  W  V  R  Q  A  P  G  K  G  M  
                    Query_3978   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTATTTTAGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGATGG  90
V  94.7% (234/247)  IGHV3-48*03  47   .............................................G..AT....................................C...  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  N  I  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_3978   91   AGTGGGTTTCATATATTAGTAGTAGTGGCAGTAACATACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.7% (234/247)  IGHV3-48*03  137  .............C..............T....C....T...................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  V  E  D  T  A  I  Y  Y  C  M  S  G  Y  M  Y  G  F  D  
                    Query_3978   181  AGAACTCAGTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTATTTATTACTGTATGAGTGGATATATGTATGGTTTTGACT  270
V  94.7% (234/247)  IGHV3-48*03  227  ........C...........................C.............G...........GC...-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD5-12*01  2    -------------------------------------------------------------------........---------------  9
J  93.0% (40/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------.......  12

                                      ->                                  
                                      Y  W  S  Q  G  T  L  V  T  V  S  S  
                    Query_3978   271  ACTGGAGTCAGGGAACCCTGGTCACCGTCTCTTCAG  306
J  93.0% (40/43)    IGHJ4*02     13   .....G.C.......................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_287468

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           363     1e-102
IGHD6-19*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AATGGCAA	AGCAGTGGCTGGT	TATGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAATGGCAAAGCAGTGGCTGGTTATGGGCTACTACGGTATGGACGTC	AREMAKQWLVMGYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3979   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGTCTGG  90
V  96.4% (241/250)  IGHV3-48*03  47   .............................................G.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  G  D  N  T  I  Y  Y  A  E  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_3979   91   AGTGGATTTCATACATTAGTAGTGGTGATAATACCATATACTACGCAGAGTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (241/250)  IGHV3-48*03  137  .....G.................A...G..G..................C......A.................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  M  A  K  Q  W  L  
                    Query_3979   181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGAAATGGCAAAGCAGTGGCTGG  270
V  96.4% (241/250)  IGHV3-48*03  227  .....T................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD6-19*01  7    ------------------------------------------------------------------------------............  18

                                      IMGT--------------------->                                 
                                      V  M  G  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3979   271  TTATGGGCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (13/13)   IGHD6-19*01  19   .----------------------------------------------------------  19
J  100.0% (52/52)   IGHJ6*02     11   -------....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_287469

Length=418
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD1-26*01                                                                                           18.0    0.71  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCGAGACGTCCCCTTAC	AGTGGGAACTAC	GACAAAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCGAGACGTCCCCTTACAGTGGGAACTACGACAAAGTACTACCACTACGGTATAGACGCC	ARHPRRPLTVGTTTKYYHYGIDA	292	360	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	295	279	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  
                    Query_3980   5    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCCGGATACAGCTTTATTA  94
V  94.6% (279/295)  IGHV5-51*01  2    ........................................C................................T.............CC.  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_3980   95   GTTATTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCCGGTGACTCGGATACCAGATACA  184
V  94.6% (279/295)  IGHV5-51*01  92   .C..C........C.....................................................T........T.............  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  E  G  Q  V  T  I  S  V  D  M  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_3980   185  ACCCGTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACATGTCCATCAGCACCGCCTACCTCCAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  94.6% (279/295)  IGHV5-51*01  182  G..........C...................A.C.....A.....................G............................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------------CDR3-IMGT----------------------------->    
                                      S  A  M  Y  Y  C  A  R  H  P  R  R  P  L  T  V  G  T  T  T  K  Y  Y  H  Y  G  I  D  A  W  
                    Query_3980   275  GCGCCATGTATTACTGTGCGAGACATCCGAGACGTCCCCTTACAGTGGGAACTACGACAAAGTACTACCACTACGGTATAGACGCCTGGG  364
V  94.6% (279/295)  IGHV5-51*01  272  C........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  91.7% (11/12)    IGHD1-26*01  6    -------------------------------------------.......G....-----------------------------------  17
J  93.0% (53/57)    IGHJ6*02     6    --------------------------------------------------------------......T..........G....T.....  33

                                                                   
                                      G  L  G  T  T  V  T  V  S  S 
                    Query_3980   365  GCCTAGGGACCACGGTCACCGTCTCCTCA  393
J  93.0% (53/57)    IGHJ6*02     34   ...A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41024880


Query= Query_280117

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            276     3e-76
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	21	6	0	77.8
FR2-IMGT	57	107	51	48	3	0	94.1
CDR2-IMGT	108	128	21	15	6	0	71.4
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	212	36	0	85.5


Alignments

                                     <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                        S  L  R  L  S  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_3981  1    GGTCCCTGAGACTCTCCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTC  90
V  85.5% (212/248)  IGHV4-4*01  47   ..A.....TCC...A.....G..G......G.........C.GC.GT................................A........G.  136
                                        T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                     ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                     L  E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  
                    Query_3981  91   TGGAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCA  180
V  85.5% (212/248)  IGHV4-4*01  137  ................A...T.....A.T..GAG............C.........A.............................T...  226
                                     L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                     -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                     R  N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  
                    Query_3981  181  GAAATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTC  270
V  85.5% (212/248)  IGHV4-4*01  227  AG..C.............AG...A.C...G.....G.....................G.......A..----------------------  294
                                     K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                       
D  83.3% (10/12)    IGHD2-2*01  13   ------------------------------------------------------------------------.....C..G...------  24

                                     ------------->                                  
                                     R  G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_3981  271  GGGGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  318
J  93.0% (40/43)    IGHJ4*02    6    -----.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_280116

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD1-26*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGTGAGA	GGGAGCTA	TTGTGGGGAGCAGTCAACGAGGATTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGTGAGAGGGAGCTATTGTGGGGAGCAGTCAACGAGGATTGCTTTGACTCC	ARDSERELLWGAVNEDCFDS	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  I  N  H  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_3982   1    GGTCCCTGAGACTCTCCTGTGCAGCATCTGGATTCACCTTTATCAACCATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   .........................C................G..G.T.........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  
                    Query_3982   91   AGTGGGTCTCGAGTATAAGTGGTAGTGGTGGTAGCACATACTACGCAGATTCCGTCAAGGGCCGGTTCACCATCTCCAGAGACATTTCCA  180
V  92.8% (232/250)  IGHV3-23*01  137  ..........AGC...T................................C.....G............................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  R  T  M  Y  L  Q  M  N  S  L  R  D  D  D  T  A  V  Y  Y  C  A  R  D  S  E  R  E  L  L  
                    Query_3982   181  AGAGGACGATGTATCTGCAAATGAACAGCCTGAGAGACGACGACACGGCCGTATATTACTGTGCGAGAGATAGTGAGAGGGAGCTATTGT  270
V  92.8% (232/250)  IGHV3-23*01  227  ...AC...C...........................C...G.........................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD1-26*01  9    ------------------------------------------------------------------------------........----  16

                                      R3-IMGT------------------------>                                
                                      W  G  A  V  N  E  D  C  F  D  S  W  G  Q  G  S  L  V  T  V  S  S
                    Query_3982   271  GGGGAGCAGTCAACGAGGATTGCTTTGACTCCTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTC  334
J  95.2% (40/42)    IGHJ4*02     5    ----------------------........A..............C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_280115

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           444     6e-127
IGHJ3*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ACCCTCGG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTCGGTGCTCTTGATATC	ARTLGALDI	291	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	74	1	0	98.7
CDR1-IMGT	78	101	24	24	0	0	100
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	112	2	0	98.2
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	294	289	5	0	98.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  R  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_3983   3    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTAGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  92
V  98.3% (289/294)  IGHV1-18*01  1    ..........................................G...............................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y 
                    Query_3983   93   AGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAATTAT  182
V  98.3% (289/294)  IGHV1-18*01  91   .........................................G.........................C..................C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_3983   183  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  272
V  98.3% (289/294)  IGHV1-18*01  181  .........C................................................................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><--------CDR3-IMGT-------->                                  
                                       T  A  V  Y  Y  C  A  R  T  L  G  A  L  D  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_3983   273  ACGGCCGTGTATTACTGTGCGAGAACCCTCGGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  351
V  98.3% (289/294)  IGHV1-18*01  271  ........................-------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                        
J  93.6% (44/47)    IGHJ3*02     4    --------------------------------....T..............................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_280114

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         319     2e-89
IGHD2-2*01                                                                                            35.3    4e-06
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGGGGAG	TATTGTAGTAGTACCAACTGC	ATG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGGGGAGTATTGTAGTAGTACCAACTGCATGTACGGTCTGGACGTC	ARGGEYCSSTNCMYGLDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  D  I  Y  S  W  N  W  I  R  Q  P  P  G  M  G 
                    Query_3984     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCTCCAGTGATATTTACTCCTGGAACTGGATCCGGCAGCCACCAGGGATGGGC  90
V  91.1% (226/248)  IGHV4-30-2*01  49   .......................................AG.....G.GG...........G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  V  G  H  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  R  S 
                    Query_3984     91   CTGGAGTGGGTTGGCCACATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCCAGAGTCGAGTCACCATCTCAGTTGACAGGTCC  180
V  91.1% (226/248)  IGHV4-30-2*01  139  .........A....GT..................G......................A................A.....A.........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  K  H  F  S  L  R  L  T  P  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  E  Y  C  S  S 
                    Query_3984     181  AAGAAACACTTCTCGTTGAGGCTGACCCCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGGGGGGGGGAGTATTGTAGTAGT  270
V  91.1% (226/248)  IGHV4-30-2*01  229  .....C..G.....CC...A.....G.T.........................G..............----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  95.2% (20/21)    IGHD2-2*01     5    ------------------------------------------------------------------------------............  16

                                        -IMGT--------------------->                                 
                                         T  N  C  M  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3984     271  ACCAACTGCATGTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
D  95.2% (20/21)    IGHD2-2*01     17   ....G....---------------------------------------------------  25
J  97.9% (47/48)    IGHJ6*02       15   ------------......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_280113

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD6-13*01                                                                                           21.8    0.039 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGAG	AGCAGCAGCTG	AA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGAGCAGCAGCTGAATGACTAC	ARDREQQLNDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3985   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  V  S  S  I  S  S  S  S  S  Y  M  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_3985   91   AGTGCGTCTCATCCATTAGTAGTAGCAGTAGTTACATGTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACGACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  ....G....................T...........A.............................................A......  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  E  Q  Q  L  N  
                    Query_3985   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGAGAGCAGCAGCTGAATG  270
V  98.4% (246/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  7    ---------------------------------------------------------------------------...........----  17
J  97.6% (40/41)    IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3985   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTTTCCTCAG  309
J  97.6% (40/41)    IGHJ4*02     10   ...............................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_280112

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           316     2e-88
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCGGAGGTTCC	ACTATGG	CCACCTGACACCAC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCGGAGGTTCCACTATGGCCACCTGACACCACTTGAGTAC	ASRRFHYGHLTPLEY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	222	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  N  W  V  C  Q  T  P  G  R  G  L  E 
                    Query_3986   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAACTGGGTCTGCCAGACCCCAGGGAGGGGGCTGGAG  90
V  91.7% (222/242)  IGHV4-34*01  49   .......................................................G....A..C.....C.........A..........  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  V  N  H  S  G  N  S  N  S  N  P  S  L  K  S  R  V  P  I  L  V  D  T  S  K  N 
                    Query_3986   91   TGGCTTGGGGAAGTCAATCATAGTGGCAACAGCAACTCCAACCCGTCCCTCAAGAGTCGAGTCCCCATATTAGTCGACACGTCCAAGAAC  180
V  91.7% (222/242)  IGHV4-34*01  139  ...A........A.............A.G..C.....A.........................A......C...A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  S  R  R  F  H  Y  G  H  L  T 
                    Query_3986   181  CAGTTCTCCCTGAAACTGACTTCTGTGACCGCCGCGGACACGGCTCTTTATTATTGTGCGAGTCGGAGGTTCCACTATGGCCACCTGACA  270
V  91.7% (222/242)  IGHV4-34*01  229  ..............G....GC........................G.G.....C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD3-10*01  6    -------------------------------------------------------------------------.......----------  12

                                      ----------->                                  
                                       P  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3986   271  CCACTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.6% (41/42)    IGHJ4*02     7    ----....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_280110

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           293     2e-81
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	21	24	4	4	0	0	100
CDR1-IMGT	25	48	24	20	4	0	83.3
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	22	2	0	91.7
FR3-IMGT	124	237	114	105	9	0	92.1
Total	N/A	N/A	217	202	15	0	93.1


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_3987   21   GTCTGGATTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  110
V  93.1% (202/217)  IGHV3-33*03  72   ............C..C.....C.....C..............................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  I  K  K  Y  Y  A  D  S  V  K  G  R  S  T  I  F  R  D  D  S  K  N  T  L  F  L  Q  M  N
                    Query_3987   111  TGGAATTAAGAAATACTATGCAGACTCCGTGAAGGGCCGATCCACCATCTTCAGAGACGACTCCAAGAACACCCTGTTTCTGCAGATGAA  200
V  93.1% (202/217)  IGHV3-33*03  162  .....G...T...............................T........C.......A.............G....A......A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------CDR3-IMGT----------->                    
                                        S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  D  P  W  G  Q  G  T  Q  V
                    Query_3987   201  CAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCGACCCCTGGGGCCAGGGAACCCAGGT  290
V  93.1% (202/217)  IGHV3-33*03  252  .........................G.G.....C...-----------------------------------------------------  288
                                        S  L  R  A  E  D  T  A  V  Y  Y  C                                                      
D  90.9% (10/11)    IGHD6-13*01  7    ------------------------------------------....G......-------------------------------------  17
J  97.8% (45/46)    IGHJ5*02     6    ----------------------------------------------------------............................T...  37

                                                    
                                        T  V  S  S  
                    Query_3987   291  CACCGTCTCCTCAG  304
J  97.8% (45/46)    IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_3349

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           294     7e-82
IGHD3-22*01                                                                                           14.1    8.8  
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGCCTGC	AGTAGTAATTACT	GTTATGACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGCCTGCAGTAGTAATTACTGTTATGACGACTACTTCTACGGTATGGACGTC	ARVACSSNYCYDDYFYGMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	96	18	0	84.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  T  G  N  Y  Y  W  T  W  I  R  Q  R  P  E  K  G 
                    Query_3988   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAACACTGGCAATTACTACTGGACCTGGATCCGCCAGCGCCCAGAGAAGGGC  90
V  87.6% (219/250)  IGHV4-31*03  49   ...............................G........G..G...TGG...........G..............A.....G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  N  G  I  T  Y  Y  S  P  S  L  R  G  R  I  A  I  S  V  D  R  S 
                    Query_3988   91   CTGGAGTGGATTGGATACATATATTACAATGGGATCACCTACTACAGCCCGTCCCTCCGGGGGCGAATTGCCATATCAGTAGACAGGTCT  180
V  87.6% (219/250)  IGHV4-31*03  139  ..............G.....C.......G.....G...........A..........AA.A.T...G..A...............C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  K  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  G  T  Y  Y  C  A  R  V  A  C  S  S  N  Y 
                    Query_3988   181  AAGAAACAATTCTCATTGAGGCTGAGCTCCGTGACTGCCGCGGACACGGGCACTTATTACTGTGCGAGAGTCGCCTGCAGTAGTAATTAC  270
V  87.6% (219/250)  IGHV4-31*03  229  .....C..G.....CC...A.........T...................C.GTG................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  84.6% (11/13)    IGHD3-22*01  17   ------------------------------------------------------------------------------...G..T.....  28

                                      DR3-IMGT------------------------>                                 
                                       C  Y  D  D  Y  F  Y  G  M  D  V  W  G  P  G  T  T  V  T  V  S  S 
                    Query_3988   271  TGTTATGACGACTACTTCTACGGTATGGACGTCTGGGGCCCAGGGACCACGGTCACCGTCTCCTCA  336
D  84.6% (11/13)    IGHD3-22*01  29   .-----------------------------------------------------------------  29
J  96.4% (54/56)    IGHJ6*02     7    ----------......A.......................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_280119

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD4-17*01                                                                                           14.1    8.4  
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGAATAC	AG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGAATACAGCAACTGGGTCGACCCC	ARDSGEYSNWVDP	250	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	135	27	19	2	6	70.4
FR3-IMGT	136	249	114	105	9	0	92.1
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	233	18	6	90.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  V  S  S  G  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_3989   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCGTCAGCAGTGGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGG  90
V  90.7% (233/257)  IGHV4-61*01  49   ...................C...........G.............................G...........................A  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  H  I  Y  N  Y  N  R  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D 
                    Query_3989   91   CTGGAGTGGATCGGTCATATCTATAACTATAACAGAGGGAGCACCAATTATAATCCCTCCCTCCAAAGTCGAGTCACCATATCAGTAGAC  180
V  90.7% (233/257)  IGHV4-61*01  139  ...........T..GT........T..------..T...........C..C..C.........A.G........................  222
                                       L  E  W  I  G  Y  I  Y  Y        S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------CDR3-I
                                       T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  G  E  Y 
                    Query_3989   181  ACATCCAAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATTCCGGTGAATAC  270
V  90.7% (233/257)  IGHV4-61*01  223  ..G........................C...G...........................G.................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  90.0% (9/10)     IGHD4-17*01  7    --------------------------------------------------------------------------------......C...  16

                                      MGT-------------->                                  
                                       S  N  W  V  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3989   271  AGCAACTGGGTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  98.0% (49/50)    IGHJ5*02     2    --.......T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_280118

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           297     7e-83
IGHD3-9*01                                                                                            12.2    31   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCCCGAGGGTGGCAG	TGACTTGTT	CCTTTCG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATCCCGAGGGTGGCAGTGACTTGTTCCTTTCGTAC	VKDPEGGSDLFLSY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	24	16	5	3	66.7
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	250	222	25	3	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  I  F  R  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_3990   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTTATCTTCAGAAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  88.8% (222/250)  IGHV3-64*05  47   ..................................C.C......T..C...........................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  I  S  T  V  S  S  N  E  Y     T  Y  Y  A  D  S  V  K  G  R  F  S  V  S  R  D  N  S  
                    Query_3990   91   AATCTATTTCGACTGTCAGTAGTAATGAGTATA---CATACTACGCAGACTCAGTGAAGGGCAGATTCTCCGTTTCCAGAGACAACTCCA  177
V  88.8% (222/250)  IGHV3-64*05  137  ...A.G....AG..A.T..........G.GG..GCA................................A..A.C...........T....  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  M  L  Y  L  Q  M  S  S  L  R  P  E  D  S  G  V  Y  Y  C  V  K  D  P  E  G  G  S  D  
                    Query_3990   178  AGAACATGCTTTATCTTCAAATGAGCAGTCTGAGACCTGAGGACTCGGGTGTCTATTATTGTGTGAAAGATCCCGAGGGTGGCAGTGACT  267
V  88.8% (222/250)  IGHV3-64*05  227  ......C...G...G....................G........A...C...G.....C...........--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  88.9% (8/9)      IGHD3-9*01   15   -------------------------------------------------------------------------------------.....  19

                                      ------------->                                
                                      L  F  L  S  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3990   268  TGTTCCTTTCGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  313
D  88.9% (8/9)      IGHD3-9*01   20   G...------------------------------------------  23
J  100.0% (35/35)   IGHJ4*02     12   -----------...................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_28196

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         329     3e-92
IGHD5-12*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGAGGAT	TGGCTACGA	GGCCCCCTTTGCCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGGCCCCCTTTGCCCTC	ARAGRIGYEAPFAL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	56	27	26	1	0	96.3
FR2-IMGT	57	107	51	51	0	0	100
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	246	228	18	0	92.7


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  R  L  S  C  T  V  S  G  Y  S  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L  
                    Query_3991     4    CCCTGAGACTCTCCTGCACTGTCTCTGGTTACTCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTGG  93
V  92.7% (228/246)  IGHV4-38-2*02  50   .....TCC...A...................................T..........................................  139
                                           L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  G  S  I  Y  R  S  G  R  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K  
                    Query_3991     94   AGTGGATTGGGAGTATCTATCGTAGTGGGAGAACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAGA  183
V  92.7% (228/246)  IGHV4-38-2*02  140  .....................A.........C.........A..............A........................C........  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                        N  Q  F  S  L  N  L  N  S  A  A  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  A  
                    Query_3991     184  ACCAGTTCTCGTTGAATCTGAACTCTGCGGCCGACGCAGACACGGCCGTCTATTACTGTGCGAGAGCGGGGAGGATTGGCTACGAGGCCC  273
V  92.7% (228/246)  IGHV4-38-2*02  230  ..........CC....G....G.....T.A...C...............G................------------------------  295
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (9/9)     IGHD5-12*01    11   ----------------------------------------------------------------------------.........-----  19

                                        ---------->                                  
                                        P  F  A  L  W  G  Q  G  T  L  V  S  V  S  P  
                    Query_3991     274  CCTTTGCCCTCTGGGGCCAGGGAACCCTGGTCTCCGTCTCCCCAG  318
J  94.3% (33/35)    IGHJ4*02       14   ----------......................A........T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_28197

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD4-17*01                                                                                           21.8    0.046 
IGHJ2*01                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGGGCCC	CTACGGTGACT	TACCCCCT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGGGCCCCTACGGTGACTTACCCCCTTACTGGTACTTCGATCTC	AGGPYGDLPPYWYFDL	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	266	20	0	93


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  S  S  H
                    Query_3992   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTTCCAGCCA  90
V  93.0% (266/286)  IGHV5-51*01  6    .................................................................G............C...A.....T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_3992   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGACACCAGATACAGCCC  180
V  93.0% (266/286)  IGHV5-51*01  96   ...........................................................................T..............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  E  Q  V  N  L  S  V  E  K  S  I  T  T  A  Y  L  Q  W  T  S  L  R  P  S  D  T  G
                    Query_3992   181  GCCCTTCCAAGAACAGGTCAACCTTTCAGTCGAAAAGTCCATCACCACCGCCTACCTGCAGTGGACCAGCCTGAGGCCCTCGGACACCGG  270
V  93.0% (266/286)  IGHV5-51*01  186  .T.........GC.......C.A.C....C...C..........G....................G........A.G............C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        I  Y  Y  C  A  G  G  P  Y  G  D  L  P  P  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S
                    Query_3992   271  CATATACTACTGTGCGGGGGGCCCCTACGGTGACTTACCCCCTTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTC  360
V  93.0% (266/286)  IGHV5-51*01  276  ...G..T.........--------------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                           
D  100.0% (11/11)   IGHD4-17*01  4    ------------------------...........-------------------------------------------------------  14
J  100.0% (50/50)   IGHJ2*01     2    -------------------------------------------...............................................  48

                                         
                                        S
                    Query_3992   361  CTC  363
J  100.0% (50/50)   IGHJ2*01     49   ...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_28194

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD2-8*01                                                                                            14.1    8.5  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD2-8*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACAT	TAATGGT	TATCG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTAATGGTTATCGTGATGCTTTCGAAATC	ARTRHINGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_3993   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (227/249)  IGHV4-61*01  49   .......................C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S 
                    Query_3993   91   CTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  91.2% (227/249)  IGHV4-61*01  139  ....A.........GT............G......CAC..A.........................G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  N  G  Y 
                    Query_3993   181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTAATGGTTAT  270
V  91.2% (227/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD2-8*01   13   --------------------------------------------------------------------------------.......---  19

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_3993   271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_28195

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           371     7e-105
IGHD1-20*01                                                                                           12.2    35    
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-20*01	IGHJ4*02	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTAGAGAGGGGGGGGGGC	TATAAC	ACTGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTAGAGAGGGGGGGGGGCTATAACACTGCTTTTGACATC	ATREGGGL*HCF*H	284	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	262	25	0	91.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  P  S  S  S  Y
                    Query_3994   1    GCAGCTGGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGGCCCCTCCAGCAGCTA  90
V  91.3% (262/287)  IGHV1-69*06  6    ..................G.....G.................C.......................T.........A...T.........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        T  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  S  F  R  A  T  S  Y  A  Q
                    Query_3994   91   CACTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTTCCTTTCGTGCAACCAGCTACGCACA  180
V  91.3% (262/287)  IGHV1-69*06  96   TG..A...........................................................AT....G..A..G.A.A.........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  R  A  T  N  T  A  Y  M  E  L  N  S  L  R  S  D  D  T  A
                    Query_3994   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAGAGCCACGAACACAGCGTACATGGAGTTGAACAGCCTGAGATCTGACGACACGGC  270
V  91.3% (262/287)  IGHV1-69*06  186  ...................................A.T......G......C.........C...G...............G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT---------------->                                  
                                        L  Y  Y  C  A  T  R  E  G  G  G  L  *  H  C  F  *  H  L  G  P  G  N  P  G  H  R  L  L   
                    Query_3994   271  CCTATATTACTGTGCGACTAGAGAGGGGGGGGGGCTATAACACTGCTTTTGACATCTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  360
V  91.3% (262/287)  IGHV1-69*06  276  .G.G.............-------------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                           
D  100.0% (6/6)     IGHD1-20*01  3    -----------------------------------......-------------------------------------------------  8
J  93.0% (40/43)    IGHJ4*02     6    -----------------------------------------------......TA........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_28192

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           339     1e-95
IGHD7-27*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GAC	AACTGGGGA	ATTACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGACAACTGGGGAATTACCACTTTGAGGAC	AKGQLGNYHFED	237	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	122	24	18	0	6	75
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	249	235	8	6	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_3995   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCGTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-23*01  47   ......................................T...................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S        G  G  S  T  Y  Y  A  D  S  V  K  D  R  F  S  I  S  R  D  Y  S  
                    Query_3995   91   AGTGGGTCTCAAGTATTAGT------GGTGGTAGCACATACTACGCGGACTCCGTGAAGGACCGGTTCTCCATCTCCAGAGACTATTCCA  174
V  94.4% (235/249)  IGHV3-23*01  137  ...........GC.......GGTAGT....................A.............G.......A..............A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  G  Q  L  G  N  Y  H  
                    Query_3995   175  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGGACAACTGGGGAATTACCACT  264
V  94.4% (235/249)  IGHV3-23*01  227  ..................................................G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD7-27*01  3    ------------------------------------------------------------------------.........---------  11
J  93.3% (42/45)    IGHJ4*02     4    ---------------------------------------------------------------------------------------...  6

                                      ------->                                  
                                      F  E  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_3995   265  TTGAGGACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  306
J  93.3% (42/45)    IGHJ4*02     7    ....CT.............A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_28193

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           305     3e-85
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCGA	TCGGCGCGGA	TCGGGGAG	CCTATTGTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACCGATCGGCGCGGATCGGGGAGCCTATTGTCCTACTACTACGCTATGGACGTC	TTDRRGSGSLLSYYYAMDV	245	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	130	30	24	6	0	80
FR3-IMGT	131	244	114	101	13	0	88.6
CDR3-IMGT (germline)	245	252	8	7	1	0	87.5
Total	N/A	N/A	239	217	22	0	90.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  K  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  H  I 
                    Query_3996   14   TGTGCAGCCTCTGGATTCACTTTCAGTAAGGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCATATT  103
V  90.8% (217/239)  IGHV3-15*01  64   .............................C.......................................................G....  153
                                       C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I 

                                      --------CDR2-IMGT---------><----------------------------------------------------FR3-IMGT--
                                       K  S  R  A  D  G  G  T  T  D  Y  A  A  P  V  R  G  R  Y  T  I  S  R  D  D  S  R  N  T  L 
                    Query_3996   104  AAAAGCAGAGCGGACGGTGGAACCACAGACTACGCTGCACCCGTGAGAGGAAGATACACCATCTCAAGAGATGATTCAAGAAACACGTTG  193
V  90.8% (217/239)  IGHV3-15*01  154  .......A.A.T..T.....G..A......................A...C....T.......................A.......C..  243
                                       K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L 

                                      --------------------------------------------------><-----------------------CDR3-IMGT------
                                       F  L  Q  M  N  S  L  R  T  E  D  T  G  V  F  Y  C  T  T  D  R  R  G  S  G  S  L  L  S  Y 
                    Query_3996   194  TTTCTTCAGATGAACAGCCTGAGGACCGAGGACACAGGCGTCTTTTACTGTACCACCGATCGGCGCGGATCGGGGAGCCTATTGTCCTAC  283
V  90.8% (217/239)  IGHV3-15*01  244  .A...G..A.............AA.............C...G.A............A..-------------------------------  302
                                       Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                                  
D  100.0% (8/8)     IGHD3-10*01  14   ---------------------------------------------------------------------........-------------  21
J  96.4% (53/55)    IGHJ6*02     8    --------------------------------------------------------------------------------------....  11

                                      ----------------->                                 
                                       Y  Y  A  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_3996   284  TACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  334
J  96.4% (53/55)    IGHJ6*02     12   .......G...............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_28190

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           327     9e-92
IGHD1-26*01                                                                                           14.1    8.5  
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	TGGGAGC	GCCAACTCTACACGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGGAGCGCCAACTCTACACGGCTACTACTACGGTATGGACGTC	ARVGAPTLHGYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  I  S  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_3997   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCATTTCCTATGGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-21*01  47   ....................................C.....G.AG....A.......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  G  S  Y  T  Y  F  A  A  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_3997   91   AGTGGGTCTCGTCCATTAGTAGTAGTGGTTCTTACACATACTTCGCGGCCTCAGTAGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.0% (229/249)  IGHV3-21*01  137  ..........A...............A..AG.....T.....A...A.A......GA.................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  I  L  Q  M  D  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  G  A  P  T  L  H  
                    Query_3997   181  AGAACTCACTGATTCTGCAAATGGACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGTGGGAGCGCCAACTCTACACG  270
V  92.0% (229/249)  IGHV3-21*01  227  ...........TA..........A................G...........G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  8    ---------------------------------------------------------------------.......--------------  14

                                      GT-------------------->                                 
                                      G  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_3997   271  GCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (55/55)   IGHJ6*02     8    -.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_28191

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD1-26*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTGTTTTC	TGGGACCTACTAC	CTTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTAC	ARVFSGTYYLLDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  T  A  F  G  Y  S  F  T  S  Y
                    Query_3998   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTACGGCTTTTGGATACAGCTTTACCAGTTA  90
V  95.8% (277/289)  IGHV5-51*03  6    ..............................................................A..G..C..................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  R  D  G  E  T  R  Y  S  P
                    Query_3998   91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTCGTGACGGTGAAACCAGATACAGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   C...............................................................G.....TC...T..............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_3998   181  GTCCTTCCAAGGCCAGGTCAGCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  ....................C....................................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                
                                        M  Y  Y  C  A  R  V  F  S  G  T  Y  Y  L  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_3998   271  CATGTATTATTGTGCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  354
V  95.8% (277/289)  IGHV5-51*03  276  .........C.........-----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                  
D  92.3% (12/13)    IGHD1-26*01  8    ---------------------------.....G.......--------------------------------------------  20
J  100.0% (40/40)   IGHJ4*02     7    --------------------------------------------........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_320294

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           343     2e-96
IGHD6-13*01                                                                                           12.2    30   
IGHJ3*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	A	TGGTAC	N/A	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGTACATGCTTTTGATATC	ARMVHAFDI	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	231	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_3999   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (231/243)  IGHV4-59*08  49   ..........................................AG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       C  I  G  Y  I  Y  Y  M  G  S  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_3999   91   TGCATTGGATATATCTATTACATGGGGAGCACCAACTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCATTAGACACATCCAAGAAC  180
V  95.1% (231/243)  IGHV4-59*08  139  ..G.....G.............GT...........................A....................G.......G.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  M  V  H  A  F  D  I  W  G 
                    Query_3999   181  CAGTTCTCCCTGAAGCTGACCTCCGTGACCGCCGCAGACACGGCCGTTTATTACTGTGCGAGAATGGTACATGCTTTTGATATCTGGGGC  270
V  95.1% (231/243)  IGHV4-59*08  229  ...................G...T.......................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-13*01  16   ----------------------------------------------------------------......--------------------  21
J  97.9% (47/48)    IGHJ3*02     3    ----------------------------------------------------------------------....................  22

                                                                  
                                       Q  G  T  M  V  T  V  S  S  
                    Query_3999   271  CAGGGGACAATGGTCACCGTCTCTTCAG  298
J  97.9% (47/48)    IGHJ3*02     23   ..A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_320297

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACAGACTAC	AALIAASHFTDY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	70	4	0	94.6
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	103	11	0	90.4
CDR3-IMGT (germline)	289	291	3	3	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_4000   2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCA  91
V  93.1% (270/290)  IGHV5-51*01  2    ....G.....G.......................A...................................T...................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  V  P  G  Q  G  L  E  L  M  G  L  I  Y  P  G  D  S  D  T  W  Y  
                    Query_4000   92   CCTACTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCAAGGCCTGGAGTTGATGGGGCTCATCTATCCTGGTGACTCTGATACCTGGTACA  181
V  93.1% (270/290)  IGHV5-51*01  92   G.........................A........A............G.......A..........................A.A....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  T  S  A  Y  L  Q  W  T  T  L  K  A  S  D  
                    Query_4000   182  GTCCGTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCACCTCCGCCTACCTGCAGTGGACCACCCTGAAGGCCTCGGACA  271
V  93.1% (270/290)  IGHV5-51*01  182  .C......................C...................A...G.A..................G..G.................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4000   272  CCGCCATTTACTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACAGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  358
V  93.1% (270/290)  IGHV5-51*01  272  .......G..T.........-------------------------------------------------------------------  291
                                      T  A  M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    -------------------------...A.....-----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -----------------------------------------------.................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_320296

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           349     2e-98
IGHD5-12*01                                                                                           18.0    0.60 
IGHJ2*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGAAATGTATGAT	TATAGTGGC	ACAATATAT	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGAAATGTATGATTATAGTGGCACAATATATTGGTACTTCGATCTC	ARQEMYDYSGTIYWYFDL	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  S  R  S  Y  P  W  G  W  V  R  Q  P  P  R  K  G 
                    Query_4001   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGCAGTAGGAGCTACCCCTGGGGCTGGGTCCGCCAGCCCCCACGGAAGGGG  90
V  94.4% (237/251)  IGHV4-39*01  49   ......................................C........T..T...TA..........A..............G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  N  S  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  H  T  S 
                    Query_4001   91   CTGGAGTGGATTGGGACTATCTATAATAGTGGGAGGACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTACACACGTCG  180
V  94.4% (237/251)  IGHV4-39*01  139  ................G.......T..........C.............................................G.......C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       N  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  E  M  Y  D  Y  S 
                    Query_4001   181  AACAACCAGTTCTCCCTGCAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACAAGAAATGTATGATTATAGT  270
V  94.4% (237/251)  IGHV4-39*01  229  ..G...............A....................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD5-12*01  6    ------------------------------------------------------------------------------------......  11

                                      -IMGT--------------------->                                  
                                       G  T  I  Y  W  Y  F  D  L  W  G  R  G  S  L  V  T  V  S  S  
                    Query_4001   271  GGCACAATATATTGGTACTTCGATCTCTGGGGCCGTGGCTCCCTGGTCACTGTCTCCTCAG  331
D  100.0% (9/9)     IGHD5-12*01  12   ...----------------------------------------------------------  14
J  98.0% (48/49)    IGHJ2*01     5    ------------...........................A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_320291

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD6-13*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	ARHRYLGPRQQATENDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  Q  G  S  G  Y  T  F  T  T  Y
                    Query_4002   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTACCACCTA  90
V  95.9% (279/291)  IGHV5-51*01  6    ..........................................G..................A...............G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  D  D  S  D  P  R  Y  S  P
                    Query_4002   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAGTCATCTATCCTGATGACTCTGATCCCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G..........................................GA............G..........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4002   181  GTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  ......................A................................C..........C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_4002   271  CATGTATTACTGTGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  95.9% (279/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-13*01  8    ---------------------------------------.......--------------------------------------------  14
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_4002   361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_320290

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           338     5e-95
IGHD6-19*01                                                                                           16.1    2.4  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CTCTGTGAC	CAGTGCCTGGT	CGTTTGGTCCCCCCCCACGACTCT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACTCTGTGACCAGTGCCTGGTCGTTTGGTCCCCCCCCACGACTCTACTTCTTTGACTCC	ARHSVTSAWSFGPPPRLYFFDS	246	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  T  T  Y  H  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_4003   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTACTACTTACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  93.2% (233/250)  IGHV4-39*01  50   .....TCC...A....C............................G..G....T..................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  S  Y  S  G  S  T  D  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  
                    Query_4003   94   TGGAGTGGATTGGGAGTATCTCTTATAGTGGGAGCACCGACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCCGTGGACACGTCCA  183
V  93.2% (233/250)  IGHV4-39*01  140  .....................A................T..................A.....................A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  P  D  T  A  V  Y  Y  C  A  R  H  S  V  T  S  A  W  
                    Query_4003   184  AGAATCAATTCTCCCTGAAGCTGAGCTCTGTGACCGCCCCAGACACGGCTGTATATTACTGTGCGAGACACTCTGTGACCAGTGCCTGGT  273
V  93.2% (233/250)  IGHV4-39*01  230  ....C..G..............................G.............G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD6-19*01  9    -------------------------------------------------------------------------------.....G.....  19

                                      -CDR3-IMGT--------------------------->                                  
                                      S  F  G  P  P  P  R  L  Y  F  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4003   274  CGTTTGGTCCCCCCCCACGACTCTACTTCTTTGACTCCTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  345
J  93.8% (45/48)    IGHJ4*02     1    ------------------------...A........A..................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_28198

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD3-10*01                                                                                           43.0    2e-08
IGHJ5*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAC	TTACTATGGGTCGGGGAGTTTTTATAAC	TCCCCGT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATACTTACTATGGGTCGGGGAGTTTTTATAACTCCCCGTACTGGTTTGACTCC	AKDTYYGSGSFYNSPYWFDS	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  A  M  N  W  V  R  Q  V  P  G  K  G  L  
                    Query_4004   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACACCTATGCCATGAACTGGGTCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-23*01  47   ..........................................G..G...........G..............C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  M  S  G  H  G  G  I  T  H  Y  A  D  S  V  K  G  R  F  A  I  S  R  D  N  S  
                    Query_4004   91   AGTGGGTCTCAGGCATGAGTGGTCATGGTGGTATCACACACTACGCAGACTCCGTGAAGGGCCGGTTCGCCATCTCCAGAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-23*01  137  ............CT..T......AG........G....T.............................A.....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  S  T  L  Y  L  V  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  T  Y  Y  G  S  G  
                    Query_4004   181  AGAGCACGCTCTATCTGGTCATGAATAGCCTGAGAGCCGAGGACACGGCCGTTTACTACTGTGCGAAAGATACTTACTATGGGTCGGGGA  270
V  92.0% (230/250)  IGHV3-23*01  227  ...A......G......CAA.....C..........................A..T..............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.9% (26/28)    IGHD3-10*01  4    -------------------------------------------------------------------------.........T.......  20

                                      R3-IMGT------------------------>                                  
                                      S  F  Y  N  S  P  Y  W  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4004   271  GTTTTTATAACTCCCCGTACTGGTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  92.9% (26/28)    IGHD3-10*01  21   ...A.......-------------------------------------------------------  31
J  95.8% (46/48)    IGHJ5*01     4    ------------------.......C..............A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_28199

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            335     4e-94
IGHD1-26*01                                                                                           12.2    35   
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	N/A	GGGAGC	CGACATAGCACAAATGGAGCATTGACAGGGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGGAGCCGACATAGCACAAATGGAGCATTGACAGGGAATGCTTTTCATATC	AGSRHSTNGALTGNAFHI	269	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	40	5	0	88.9
CDR1-IMGT	47	76	30	29	1	0	96.7
FR2-IMGT	77	127	51	47	4	0	92.2
CDR2-IMGT	128	154	27	22	5	0	81.5
FR3-IMGT	155	268	114	101	13	0	88.6
CDR3-IMGT (germline)	269	271	3	3	0	0	100
Total	N/A	N/A	270	242	28	0	89.6


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  V  V  S  G  D  S  V  S  S  N  S  A  A  W  G  W  I  R 
                    Query_4005   2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGTCGTCTCCGGGGACAGTGTCTCTAGCAACAGCGCTGCTTGGGGCTGGATCAGG  91
V  89.6% (242/270)  IGHV6-1*01   31   ........G...T.G......................C.A............................T.........AA..........  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  A  R  T  Y  Y  T  S  Q  W  I  H  D  Y  E  D  S  V  K  S  R 
                    Query_4005   92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGCTAGGACATACTACACGTCCCAGTGGATTCATGATTATGAAGATTCTGTGAAAAGTCGA  181
V  89.6% (242/270)  IGHV6-1*01   121  ...............................GA.............G....A.....TA.A.........C..TA...............  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  N  V  N  A  D  T  S  K  N  Q  I  S  L  Q  L  T  S  V  T  P  E  D  T  A  M  Y  F  C  A 
                    Query_4005   182  ATAAATGTCAACGCAGACACATCCAAGAACCAGATCTCCCTGCAGTTGACCTCTGTGACTCCCGAGGACACGGCTATGTACTTCTGTGCA  271
V  89.6% (242/270)  IGHV6-1*01   211  ....CCA.....C....................T...........C...A.........................G....T.A.......  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------------------CDR3-IMGT--------------------->                                  
                                       G  S  R  H  S  T  N  G  A  L  T  G  N  A  F  H  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4005   272  GGGAGCCGACATAGCACAAATGGAGCATTGACAGGGAATGCTTTTCATATCTGGGGCCAAGGGACAATGGTCACCGTGTCTTCAG  356
D  100.0% (6/6)     IGHD1-26*01  9    ......-------------------------------------------------------------------------------  14
J  95.8% (46/48)    IGHJ3*02     3    -------------------------------------........G...............................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_136283

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         307     1e-85
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAG	G	TCGGGGAG	ACGCGGTATCCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGGTCGGGGAGACGCGGTATCCCCCTTTGAATAC	AKGRGDAVSPFEY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  T  Y  G  F  H  C  S  W  I  R  Q  P  P  G  K  G 
                    Query_4006     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCACCTATGGTTTCCACTGCAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  89.2% (223/250)  IGHV4-30-4*01  49   ..................A........................GTGG..A..A.T....G..............................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  S  Y  S  G  N  T  Y  Y  N  P  S  L  R  G  R  G  A  M  S  L  D  T  S 
                    Query_4006     91   CTGGAGTGGATTGGGTACATCTCTTACAGTGGGAATACCTACTACAACCCGTCCCTCAGGGGTCGAGGTGCCATGTCACTAGACACGTCC  180
V  89.2% (223/250)  IGHV4-30-4*01  139  ......................A...........GC......................A.A......T.A....A...G...........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         E  N  R  V  S  L  T  V  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  G  R  G  D  A  V  S 
                    Query_4006     181  GAGAACCGGGTCTCCCTGACGGTGAACTCTGTGACTGCCGCAGACACGGCCGTATATTTCTGTGCCAAAGGTCGGGGAGACGCGGTATCC  270
V  89.2% (223/250)  IGHV4-30-4*01  229  A......A.T.........A.C...G...........................G....A........G..--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-10*01    14   -----------------------------------------------------------------------........-----------  21

                                        ----------->                                
                                         P  F  E  Y  W  G  R  G  A  L  V  T  V  S  S
                    Query_4006     271  CCCTTTGAATACTGGGGCCGGGGAGCCCTGGTCACCGTCTCCTC  314
J  92.9% (39/42)    IGHJ4*02       5    --......C..........A....A...................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_136280

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         350     8e-99
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	N/A	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	N/A	GAGAGGACAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAGAGGACATTATGGACGTC	PEERTLWTS	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	26	27	26	0	1	96.3
CDR1-IMGT	27	56	30	30	0	0	100
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	17	4	0	81
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	250	239	10	1	95.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L   P  A  L  S  L  V  A  P  S  A  V  V  V  T  P  G  A  G  S  G  S  H  Q  G  R  A
                    Query_4007     1    ACCCTGTCCCT-ACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  89
V  95.6% (239/250)  IGHV4-30-2*01  49   ...........C..............................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                          W  S  G  L  D  T  S  I  I  V  G  S  A  T  P  T  R  P  S  R  V  D  S  P  Y  Q  *  T  G  P
                    Query_4007     90   CTGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACAGGTCC  179
V  95.6% (239/250)  IGHV4-30-2*01  139  ..............G......T...........AG..C.T...A......................G.......................  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                          R  T  S  C  P  *  G  *  A  L  *  P  P  R  T  R  P  C  I  T  V  P  E  E  R  T  L  W  T  S
                    Query_4007     180  AAGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAGAGGACATTATGGACGTC  269
V  95.6% (239/250)  IGHV4-30-2*01  229  ...........C.......A..................................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  97.7% (42/43)    IGHJ6*02       20   --------------------------------------------------------------------------------..........  29

                                                                         
                                          G  A  K  G  P  R  P  P  S  P   
                    Query_4007     270  TGGGGCCAAGGGACCACGGCCACCGTCTCCTCA  302
J  97.7% (42/43)    IGHJ6*02       30   ...................T.............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_136287

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD5-18*01                                                                                           18.0    0.58 
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCAT	GTGGATACA	ATTCCGT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCATGTGGATACAATTCCGTTACTACGGAATGGACGTC	ARGMWIQFRYYGMDV	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	227	14	0	94.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_4008   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCATCAGTAGTTATTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  94.2% (227/241)  IGHV4-59*01  50   .....TCC...A....C.............G...............C..C........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  F  Y  S  G  T  S  I  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N  
                    Query_4008   94   GGATTGGGTATATCTTTTACAGTGGGACCTCCATCTACAACCCCTCACTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAACC  183
V  94.2% (227/241)  IGHV4-59*01  140  ...............A...........G.A...A............C........................G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  M  W  I  Q  F  R  Y  Y  
                    Query_4008   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGGGCATGTGGATACAATTCCGTTACTACG  273
V  94.2% (227/241)  IGHV4-59*01  230  .............................................................-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (9/9)     IGHD5-18*01  1    -------------------------------------------------------------------.........--------------  9
J  96.1% (49/51)    IGHJ6*02     12   -----------------------------------------------------------------------------------.......  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_4008   274  GAATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  317
J  96.1% (49/51)    IGHJ6*02     19   .T..............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_136286

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            333     1e-93
IGHD3-22*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TAAAGGG	GTGGTTA	GG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAAGGGGTGGTTAGGCTTTGACTAC	VKGWLGFDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  R  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4009   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGCTCACTTTTAGTAGGTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.8% (228/243)  IGHV3-7*01   47   ...............................AT....C........C...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4009   91   AGTGGGTGGCCAACATAAAGGAGGATGGAAGTGAGAAATTCTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCAAGAGACAACGCCA  180
V  93.8% (228/243)  IGHV3-7*01   137  ....................C.A................A.....TG.............................C.............  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      R  N  S  L  Y  L  Q  M  N  R  L  R  A  E  D  T  A  V  Y  Y  C  V  K  G  W  L  G  F  D  Y  
                    Query_4009   181  GGAACTCACTCTATCTGCAAATGAACAGACTGAGAGCCGAGGACACGGCTGTCTATTACTGTGTAAAGGGGTGGTTAGGCTTTGACTACT  270
V  93.8% (228/243)  IGHV3-7*01   227  A.........G.................C.......................G..........---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (7/7)     IGHD3-22*01  18   ----------------------------------------------------------------------.......-------------  24
J  100.0% (44/44)   IGHJ4*02     5    -------------------------------------------------------------------------------...........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4009   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (44/44)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_136285

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           366     2e-103
IGHD2-15*01                                                                                           58.4    4e-13 
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTCG	GGATATTGTAGTGGTGGTAGCTGCTACTCC	GCGCATTT	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATCCTTCGGGATATTGTAGTGGTGGTAGCTGCTACTCCGCGCATTTCAATTGGTTCGACCCC	TRDPSGYCSGGSCYSAHFNWFDP	249	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	112	2	0	98.2
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	245	11	0	95.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  P  R  L  S  C  T  A  S  G  T  T  F  G  D  Y  T  L  S  W  V  R  Q  A  P  G  M  G  L  
                    Query_4010   1    GGTCCCCGAGACTCTCCTGTACAGCTTCTGGAACCACCTTTGGTGATTATACTCTGAGCTGGGTCCGCCAGGCTCCAGGGATGGGGCTGC  90
V  95.7% (245/256)  IGHV3-49*04  47   ......T.........................TT................G..A...........................A.......G  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      Q  W  V  G  S  I  R  S  K  A  Y  D  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_4010   91   AGTGGGTAGGTTCCATTAGAAGCAAAGCTTATGATGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  95.7% (245/256)  IGHV3-49*04  137  ............T....................G........................................................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  R  T  E  D  T  A  V  Y  Y  C  T  R  D  P  S  G  Y  
                    Query_4010   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAGAACCGAGGACACAGCCGTCTATTACTGTACTAGAGATCCTTCGGGATATT  270
V  95.7% (245/256)  IGHV3-49*04  227  .......................................A..................G.................--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (30/30)   IGHD2-15*01  2    -----------------------------------------------------------------------------------.......  8

                                      --------CDR3-IMGT----------------------------->                                  
                                      C  S  G  G  S  C  Y  S  A  H  F  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4010   271  GTAGTGGTGGTAGCTGCTACTCCGCGCATTTCAATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  351
D  100.0% (30/30)   IGHD2-15*01  9    .......................----------------------------------------------------------  31
J  98.0% (49/50)    IGHJ5*02     2    -------------------------------...C..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_136288

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            291     5e-81
IGHD3-10*01                                                                                           10.3    114  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	GTTCG	TAGGGAAAGGAGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTTCGTAGGGAAAGGAGGTTTGACTAC	AVRRERRFDY	239	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	10	2	0	83.3
CDR1-IMGT	26	49	24	19	5	0	79.2
FR2-IMGT	50	100	51	48	3	0	94.1
CDR2-IMGT	101	124	24	21	3	0	87.5
FR3-IMGT	125	238	114	106	8	0	93
CDR3-IMGT (germline)	239	241	3	3	0	0	100
Total	N/A	N/A	228	207	21	0	90.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  G  S  G  I  S  L  S  N  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  D  I 
                    Query_4011   14   TGTGCAGGTTCTGGAATCAGCTTGAGTAACTTTTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAATGGGTGGCCGACATT  103
V  90.8% (207/228)  IGHV3-7*03   64   .......CC......T...C...T....G..A.........C................................G.........A....A  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       N  P  D  G  S  E  K  Y  F  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  K  S  M  Y  M 
                    Query_4011   104  AACCCAGATGGAAGTGAGAAATACTTTGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAAGTCCATGTATATG  193
V  90.8% (207/228)  IGHV3-7*03   154  ..G.A....................A...................................................C..AC.....C..  243
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------CDR3-IMGT--------->               
                                       Q  M  K  S  L  R  A  E  D  T  A  V  Y  H  C  A  V  R  R  E  R  R  F  D  Y  W  G  Q  G  T 
                    Query_4011   194  CAGATGAAGAGCCTGAGAGCCGAGGACACGGCCGTGTATCACTGTGCGGTTCGTAGGGAAAGGAGGTTTGACTACTGGGGCCAGGGAACC  283
V  90.8% (207/228)  IGHV3-7*03   244  ..A.....C..............................T........------------------------------------------  291
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  100.0% (5/5)     IGHD3-10*01  12   ------------------------------------------------.....-------------------------------------  16
J  100.0% (43/43)   IGHJ4*02     6    ------------------------------------------------------------------........................  29

                                                         
                                       L  V  T  V  S  S  
                    Query_4011   284  CTGGTCACCGTCTCCTCAG  302
J  100.0% (43/43)   IGHJ4*02     30   ...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_1559

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           355     3e-100
IGHD6-19*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGC	TAGCAGTGGCTGGTAC	ATTTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGCTAGCAGTGGCTGGTACATTTAT	AREASSGWYIY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	259	32	0	89


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  T  S  S  G  G  P  F  S  P  F
                    Query_4012   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCTTGCACGTCTTCTGGAGGCCCCTTCAGTCCTTT  90
V  89.0% (259/291)  IGHV1-69*01  6    ..................G......................................C....A.G...........A.......CAGC.A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        S  V  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  F  G  T  T  N  Y  S  Q
                    Query_4012   91   TTCTGTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTATTTTTGGTACAACAAACTACTCACA  180
V  89.0% (259/291)  IGHV1-69*01  96   .G..A...............................................G.............C.........G........G....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  V  F  L  D  L  N  S  L  R  S  D  D  S  A
                    Query_4012   181  GAGTTTCCAGGGGAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGTATTCCTGGACTTGAACAGCCTGAGATCTGACGACTCGGC  270
V  89.0% (259/291)  IGHV1-69*01  186  ..AG........C.....................................CC.A.A....GC...G...............G...A....  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        I  Y  F  C  A  R  E  A  S  S  G  W  Y  I  Y  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_4012   271  CATATATTTTTGTGCGAGAGAGGCTAGCAGTGGCTGGTACATTTATTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  350
V  89.0% (259/291)  IGHV1-69*01  276  .G.G....AC...........-----------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                              
D  100.0% (16/16)   IGHD6-19*01  6    ------------------------................----------------------------------------  21
J  97.1% (33/34)    IGHJ4*02     15   ----------------------------------------------..................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_314851

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           396     2e-112
IGHD7-27*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGTCCTTTTA	CTAACTGGGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGTCCTTTTACTAACTGGGGTTGACTTT	AVLLLTGVDF	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	269	16	0	94.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  N  Y
                    Query_4013   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACAGCTTTACCAACTA  90
V  94.4% (269/285)  IGHV5-51*03  6    .............................................................A........................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  G  W  V  R  Q  R  P  G  E  G  L  E  W  M  G  L  I  Y  P  G  D  S  D  T  R  Y  N  S
                    Query_4013   91   CTTCATCGGCTGGGTGCGCCAGAGGCCCGGGGAAGGCCTGGAGTGGATGGGGCTCATTTATCCTGGTGACTCTGATACCAGGTACAACTC  180
V  94.4% (269/285)  IGHV5-51*03  96   ..GG...................T.......A....................A....C.......................A....G.C.  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  N  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4013   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCAACAAGTCCATCAACACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.4% (269/285)  IGHV5-51*03  186  ...............G...............G............G..........C..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        I  Y  Y  C  A  V  L  L  L  T  G  V  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4013   271  CATTTATTACTGTGCAGTCCTTTTACTAACTGGGGTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  347
V  94.4% (269/285)  IGHV5-51*03  276  ...G...........--------------------------------------------------------------  290
                                        M  Y  Y  C  A                                                              
D  100.0% (10/10)   IGHD7-27*01  1    -------------------------..........------------------------------------------  10
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_314852

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           438     5e-125
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ACCCTCGG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTCGGTGCTCTTGATATC	ARTLGALDI	289	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	24	0	0	100
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	112	2	0	98.2
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	294	287	7	0	97.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_4014   1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  90
V  97.6% (287/294)  IGHV1-18*01  1    ...G.T....................................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y 
                    Query_4014   91   AGCTATGGTATCAGCTGGGTGCGACAGGCACCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAATTAT  180
V  97.6% (287/294)  IGHV1-18*01  91   .............................C...........G.........................C..................C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_4014   181  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  270
V  97.6% (287/294)  IGHV1-18*01  181  .........C................................................................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><--------CDR3-IMGT-------->                                  
                                       T  A  V  Y  Y  C  A  R  T  L  G  A  L  D  I  W  G  Q  G  A  M  V  T  V  S  S  
                    Query_4014   271  ACGGCCGTGTATTACTGTGCGAGAACCCTCGGTGCTCTTGATATCTGGGGCCAAGGGGCAATGGTCACCGTCTCTTCAG  349
V  97.6% (287/294)  IGHV1-18*01  271  ........................-------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                        
J  95.7% (45/47)    IGHJ3*02     4    --------------------------------....T....................A.....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_132868

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           283     1e-78
IGHD3-10*01                                                                                           10.3    115  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	GCCCTTTTAGAG	CGGGG	GC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGCCCTTTTAGAGCGGGGGCCTTTGACTCC	GPFRAGAFDS	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	212	31	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  L  I  F  S  D  Y  S  M  N  W  A  R  Q  A  P  G  K  G  L  
                    Query_4015   1    GGTCCCTGAGACTCTCCTGTGCAGTTTCTGGTTTGATCTTCAGTGACTATAGCATGAACTGGGCCCGCCAGGCTCCCGGTAAGGGGCTGG  90
V  87.2% (212/243)  IGHV3-21*01  47   ........................CC.....A..C.C.......AG.................T............A..G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  S  E  S  N  Y  I  Y  Y  A  D  S  V  R  G  R  F  A  I  S  R  N  N  G  
                    Query_4015   91   AGTGGGTCGCATCCATCAGTAGTGAGAGTAATTACATATACTATGCAGACTCAGTGAGGGGCCGCTTCGCCATCTCCAGAAACAACGGCA  180
V  87.2% (212/243)  IGHV3-21*01  137  ........T.......T......AGT....G............C.............A......A...A...........G......C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  S  S  M  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  G  P  F  R  A  G  A  F  D  
                    Query_4015   181  AGAGTTCAATGTATCTGCAGATGAACAGTCTGAGAGTCGACGACACGGCTGTTTATTATTGTGGCCCTTTTAGAGCGGGGGCCTTTGACT  270
V  87.2% (212/243)  IGHV3-21*01  227  ...AC...C..........A........C.......C...G...........G.....C....---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (5/5)     IGHD3-10*01  15   ---------------------------------------------------------------------------.....----------  19
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------........  12

                                      ->                                  
                                      S  W  G  P  G  T  L  V  T  V  S  S  
                    Query_4015   271  CCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  306
J  95.5% (42/44)    IGHJ4*02     13   A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_314854

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4016  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01  49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_4016  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01  139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_4016  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01  229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01  13   ----------------------------------------------------------------------.....C..G...--------  24

                                     ----------->                                  
                                      G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_4016  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02    6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_314856

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           330     1e-92
IGHD3-10*01                                                                                           12.2    35   
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTAAATTGGGAATCCGGGGG	GGTGCGGGG	GTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTAAATTGGGAATCCGGGGGGGTGCGGGGGTTTTTGACCAC	ATKLGIRGGAGVFDH	275	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	85	24	9	6	9	37.5
FR2-IMGT	86	136	51	48	3	0	94.1
CDR2-IMGT	137	160	24	19	5	0	79.2
FR3-IMGT	161	274	114	106	8	0	93
CDR3-IMGT (germline)	275	278	4	4	0	0	100
Total	N/A	N/A	287	251	27	9	87.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  Q  P  G  S  S  V  K  V  S  C  K  A  S  S           T  S  Y
                    Query_4017   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGCAGCCTGGGTCCTCGGTGAAGGTTTCCTGCAAGGCCAGTAGT---------ACCAGTTA  81
V  87.5% (251/287)  IGHV1-69*01  6    ...............................A......................C...........TTC.G.AGGCACCTTC.G...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  S  W  V  R  L  A  P  G  Q  G  L  E  W  M  G  G  I  T  P  M  F  G  T  T  N  Y  A  Q
                    Query_4017   82   TTTTATCAGCTGGGTGCGACTGGCCCCTGGACAAGGCCTTGAGTGGATGGGAGGCATCACCCCTATGTTTGGAACAACTAACTACGCACA  171
V  87.5% (251/287)  IGHV1-69*01  96   .GC.................A...............G.................G....T......C.....T...G.A...........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  A  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  G  D  T  A
                    Query_4017   172  GAAGTTTCAGGGCAGAGTCGCGATTACCGCGGACGAATCTACGAGCACCGCCTACATGGAGTTGAGCAGCCTGAGATCTGGGGACACGGC  261
V  87.5% (251/287)  IGHV1-69*01  186  ......C............A...................C........A............C..................A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  T  K  L  G  I  R  G  G  A  G  V  F  D  H  W  G  Q  G  T  P  V  T  V  S  A
                    Query_4017   262  CGTATATTATTGTGCGACTAAATTGGGAATCCGGGGGGGTGCGGGGGTTTTTGACCACTGGGGCCAGGGAACCCCAGTCACCGTCTCCGC  351
V  87.5% (251/287)  IGHV1-69*01  276  ...G.....C.......-------------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                           
D  88.9% (8/9)      IGHD3-10*01  11   -------------------------------------...T.....--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    -------------------------------------------------......T..................TG............T.  46

                                        
                                        
                    Query_4017   352  AG  353
J  90.7% (39/43)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_314857

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           358     4e-101
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTAGA	TCAGGA	TGTACTAATACCAGCTGCT	CTCCGGAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTAGATCAGGATGTACTAATACCAGCTGCTCTCCGGATCTACTACTACGGTTTGGACGTC	AVDQDVLIPAALRIYYYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	240	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  H  Y  W  S  W  M  R  Q  P  P  G  K  G 
                    Query_4018   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGGTAGTCACTACTGGAGCTGGATGCGGCAGCCCCCAGGGAAGGGA  90
V  95.6% (240/251)  IGHV4-61*01  49   .........................................C.........T................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  N  Y  E  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_4018   91   CTGGAGTGGATTGGGAATATCTATTATAGTGGGAGCACCAACTACGAACCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCC  180
V  95.6% (240/251)  IGHV4-61*01  139  ...............T..........C..................A.C..............................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  V  D  Q  D  V  L  I  P 
                    Query_4018   181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGGTAGATCAGGATGTACTAATACCA  270
V  95.6% (240/251)  IGHV4-61*01  229  .........................G........................................AG...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.5% (17/19)    IGHD2-2*01   8    -----------------------------------------------------------------------------....G..G.....  20

                                      CDR3-IMGT-------------------------->                                 
                                       A  A  L  R  I  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4018   271  GCTGCTCTCCGGATCTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  339
D  89.5% (17/19)    IGHD2-2*01   21   ......---------------------------------------------------------------  26
J  98.2% (54/55)    IGHJ6*02     8    --------------.............A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_314858

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4019   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_4019   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCGGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  92.8% (232/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.....A.................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_4019   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  92.8% (232/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4019   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_222216

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            322     2e-90
IGHD5-18*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	N/A	TGGATACAACTATGG	GAGTGTCCCGGCGGGCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTGGATACAACTATGGGAGTGTCCCGGCGGGCATTGACTAC	AGYNYGSVPAGIDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	242	2	2	0	0	100
Total	N/A	N/A	242	224	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  V  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4020   1    ACCCTGTCCCTCACCTGCGCTGTTTCTGGTGTCTCCATCAGTAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  92.6% (224/242)  IGHV4-4*02   49   .......................C.......G.........C................................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  M  Y  H  G  G  T  T  N  Y  K  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K 
                    Query_4020   91   GAGTGGATTGGGGAAATGTACCATGGTGGGACCACCAACTACAAGCCGTCCCTCAAGAGTCGGGTCTCCATATCCGTGGACACGTCCAAG  180
V  92.6% (224/242)  IGHV4-4*02   139  .................C..T...A......G............C.................A...A.......A..A....A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  G  Y  N  Y  G  S  V  P  A 
                    Query_4020   181  AACCAGTTCTCCCTGACGCTGACCTCTGTGACCGCCGCGGACACGGCCATTTATTATTGTGCTGGATACAACTATGGGAGTGTCCCGGCG  270
V  92.6% (224/242)  IGHV4-4*02   229  ................A.....G.........................G.G.....C.....----------------------------  290
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  93.3% (14/15)    IGHD5-18*01  2    --------------------------------------------------------------........G......-------------  16

                                      ----------->                                  
                                       G  I  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_4020   271  GGCATTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  316
J  97.6% (41/42)    IGHJ4*02     7    ----....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_222217

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           427     9e-122
IGHD1-26*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	GGG	GGTCTAGTGGAAGGTACTAC	CTCCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTAC	ARGGLVEGTTSFFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_4021   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTAGTACCTA  90
V  97.2% (281/289)  IGHV5-51*03  6    ...................................................................................CC.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_4021   91   CTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  97.2% (281/289)  IGHV5-51*03  96   .......G.........................................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4021   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.2% (281/289)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        T  Y  Y  C  A  R  G  G  L  V  E  G  T  T  S  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4021   271  CACTTATTACTGTGCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCGTC  360
V  97.2% (281/289)  IGHV5-51*03  276  ..TG............A..-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  85.0% (17/20)    IGHD1-26*01  1    ----------------------...A......G..C......------------------------------------------------  20
J  97.7% (43/44)    IGHJ4*02     5    ------------------------------------------------.......................................C..  46

                                        
                                        
                    Query_4021   361  AG  362
J  97.7% (43/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_135538

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAACA	TATGACT	TATAGCAGT	AGTCCATTA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATATGACTTATAGCAGTAGTCCATTAGACTAC	AKHMTYSSSPLDY	267	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	80	30	23	7	0	76.7
FR2-IMGT	81	131	51	49	2	0	96.1
CDR2-IMGT	132	152	21	13	8	0	61.9
FR3-IMGT	153	266	114	104	10	0	91.2
CDR3-IMGT (germline)	267	274	8	7	1	0	87.5
Total	N/A	N/A	274	244	30	0	89.1


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  S  G  A  S  V  S  S  G  D  Y  Y  W  G  W  
                    Query_4022   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCGTCAGTAGTGGTGACTACTACTGGGGCTGGA  90
V  89.1% (244/274)  IGHV4-39*01  26   ................T........................A............G....A....C...A..AGT................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  P  P  G  R  G  L  E  W  L  G  S  I  Y  N  T  R  Y  P  Y  Y  S  L  S  L  K  S  R  
                    Query_4022   91   TCCGCCAGCCCCCAGGGAGGGGGCTGGAGTGGCTTGGGAGTATCTATAATACTAGATATCCCTACTATAGTTTGTCCCTCAAGAGTCGAG  180
V  89.1% (244/274)  IGHV4-39*01  116  ..................A.............A..............T...G.G.GAGCA.......C.ACCC.................  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  S  S  K  N  E  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  
                    Query_4022   181  TCACCATATCCGTAGACTCGTCCAAGAACGAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTTTATTTCTGTGCGA  270
V  89.1% (244/274)  IGHV4-39*01  206  .................A...........C............A.................................G....A........  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      -----------CDR3-IMGT-------------->                                  
                                      K  H  M  T  Y  S  S  S  P  L  D  Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_4022   271  AACATATGACTTATAGCAGTAGTCCATTAGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCTTCAG  339
V  89.1% (244/274)  IGHV4-39*01  296  G...-----------------------------------------------------------------  299
                                      R                                                                    
D  100.0% (9/9)     IGHD6-19*01  4    -----------.........-------------------------------------------------  12
J  95.0% (38/40)    IGHJ4*02     9    -----------------------------.............A.....................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_248426

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GGTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGGTCAAGAC	ARGHSYGSGSYYGQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4023   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4023   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTGGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ..................................G.............................................A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  S  Y  G  S  G 
                    Query_4023   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  97.6% (244/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  G  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4023   271  AGTTATTATGGTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_135534

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           389     2e-110
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGAGCG	GCACTGGCTGGTA	TTTGGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGAGCGGCACTGGCTGGTATTTGGCCTAC	ARGSGTGWYLAY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  M  F  T  T  Y 
                    Query_4024   2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCCAGGCTTCTGGTTACATGTTTACCACTTAC  91
V  93.1% (269/289)  IGHV1-18*04  7    ...................C........................................A...............CC.......GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  G  Y  N  G  N  T  K  Y  A  Q 
                    Query_4024   92   GGCATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGCTGGGATGGATCAGCGGCTACAATGGTAACACAAAGTATGCACAG  181
V  93.1% (269/289)  IGHV1-18*04  97   ..T..........................................A...............CT.................C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  D  R  V  T  L  T  I  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_4024   182  AACCTCCAGGACAGAGTCACCCTGACCATAGACACATCTACGAGCACTGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  93.1% (269/289)  IGHV1-18*04  187  ..G.......G..........A......C.........C........A.....C....................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  G  S  G  T  G  W  Y  L  A  Y  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_4024   272  GTCTATTACTGTGCGCGAGGGAGCGGCACTGGCTGGTATTTGGCCTACTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  353
V  93.1% (269/289)  IGHV1-18*04  277  ..G............A...---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  92.3% (12/13)    IGHD6-19*01  8    -------------------------...G.........--------------------------------------------  20
J  97.4% (37/38)    IGHJ4*02     11   --------------------------------------------......................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_135536

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           319     2e-89
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CC	GCAGTGCCTGGT	TTCCCACTCGGTCGTTTTATCAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGACCGCAGTGCCTGGTTTCCCACTCGGTCGTTTTATCATTACGGTATGGACGTC	AKDRSAWFPTRSFYHYGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  L  S  D  S  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4025   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCCTCAGTGACTCTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-30*18  47   ....................................C.T.....AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  M  S  Y  D  G  K  N  K  Y  Y  G  E  S  V  R  G  R  F  T  I  S  R  D  S  S  
                    Query_4025   91   AGTGGGTGGCAGTTATGTCATATGATGGAAAGAATAAATATTATGGAGAGTCCGTGAGGGGCCGATTCACCATCTCCCGAGACAGCTCCA  180
V  90.8% (227/250)  IGHV3-30*18  137  ................A.............GT........C....C...C.......A...................A......AT....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      N  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  F  C  A  K  D  R  S  A  W  F  P  
                    Query_4025   181  ACAACACGCTGTATCTCCAGATGAACAGCCTGCGAGCGGACGACACGGCTGTGTATTTCTGTGCCAAAGACCGCAGTGCCTGGTTTCCCA  270
V  90.8% (227/250)  IGHV3-30*18  227  .G..............G..A............A....T..G................A......G.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  91.7% (11/12)    IGHD6-19*01  8    ------------------------------------------------------------------------......G.....------  19

                                      R3-IMGT------------------------>                             
                                      T  R  S  F  Y  H  Y  G  M  D  V  W  G  Q  G  T  T  V  I  V  S
                    Query_4025   271  CTCGGTCGTTTTATCATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATAGTCTC  331
J  95.5% (42/44)    IGHJ6*02     15   -----------------.....................................CC.....  58


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_135537

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           330     1e-92
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCGAAGTGTTTCC	ATGGTTCGGGGAGT	CGACAGAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCGAAGTGTTTCCATGGTTCGGGGAGTCGACAGAATTGACTAC	ARGRSVSMVRGVDRIDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  S  F  N  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4026   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCAGCTTCAATACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-30*03  47   ........................C...........C.....G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  M  A  V  I  S  F  D  G  S  R  Q  Y  Y  A  D  S  M  E  G  R  S  T  I  S  R  D  N  S  
                    Query_4026   91   AGTGGATGGCAGTAATATCATTTGATGGAAGTAGACAATACTATGCAGACTCCATGGAGGGCCGATCAACCATCTCCAGAGACAATTCCA  180
V  92.4% (230/249)  IGHV3-30*03  137  .....G.......T.......A...........ATA.................G..A.........TC......................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  S  T  V  Y  L  Q  M  S  S  L  R  T  E  D  T  A  V  Y  Y  C  A  R  G  R  S  V  S  M  V  
                    Query_4026   181  AGAGCACGGTGTATCTGCAAATGAGCAGCCTGAGAACTGAGGATACGGCTGTGTATTACTGTGCGAGAGGGCGAAGTGTTTCCATGGTTC  270
V  92.4% (230/249)  IGHV3-30*03  227  ...A....C...............A..........G.......C.........................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD3-10*01  9    -----------------------------------------------------------------------------------.......  15

                                      GT-------------------->                                  
                                      R  G  V  D  R  I  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4026   271  GGGGAGTCGACAGAATTGACTACTGGGGCCAGGGAATACTGGTCACCGTCTCCTCAG  327
D  100.0% (14/14)   IGHD3-10*01  16   .......--------------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    ---------------.....................CC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_135530

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            353     9e-100
IGHD2-8*02                                                                                            19.9    0.15  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AAAGCGGGCTC	TACTGGTGGT	A	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAAAGCGGGCTCTACTGGTGGTAACTTTGACTAC	ARKAGSTGGNFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  I  F  T  H  Y  W  M  S  W  V  R  Q  A  P  G  K  W  L  
                    Query_4027  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTTACTCACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGTGGCTGG  90
V  95.6% (237/248)  IGHV3-7*03  47   ....................................CC....G.AG.....................................G......  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  D  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4027  91   AGTGGGTTGCCGACATAAAGCAGGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (237/248)  IGHV3-7*03  137  .......G...A..........A...................................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                     K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  K  A  G  S  T  G  G  
                    Query_4027  181  AGAACTCAGTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAAAAGCGGGCTCTACTGGTGGTA  270
V  95.6% (237/248)  IGHV3-7*03  227  ........C.G.........................................................----------------------  294
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD2-8*02  10   -------------------------------------------------------------------------------..........-  19

                                     ---------->                                  
                                     N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4027  271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (45/45)   IGHJ4*02    4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_202423

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           305     4e-85
IGHD4-17*01                                                                                           16.1    2.5  
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	TTTGGAGGGCCTCGCCTCGGG	TACGGTGA	TAAGTCTTGAACGATCACAGG	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATTTGGAGGGCCTCGCCTCGGGTACGGTGATAAGTCTTGAACGATCACAGGACTCCTACTTCTACGCCCTGGCCGTC	ANLEGLASGTVISLERSQDSYFYALAV	243	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	221	26	0	89.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  A  Y  A  M  H  W  V  R  Q  A  P  D  K  G  L  
                    Query_4028   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTTAGTGCCTATGCCATGCACTGGGTCCGCCAGGCTCCAGACAAGGGACTGG  90
V  89.5% (221/247)  IGHV3-30*18  47   ....................G...................C...AG.....G..........................G......G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  M  S  Y  D  G  Y  V  K  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  E  A  
                    Query_4028   91   AGTGGGTGGCAGTTATGTCCTATGATGGATATGTTAAGTCCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGAAGCCA  180
V  89.5% (221/247)  IGHV3-30*18  137  ................A..A.........AG.AA...A.A...........................................A.TT...  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      N  N  T  V  F  L  Q  M  N  S  L  R  Q  E  D  T  A  I  Y  Y  C  A  N  L  E  G  L  A  S  G  
                    Query_4028   181  ACAACACGGTGTTTCTGCAAATGAACAGCCTGAGACAGGAGGACACGGCTATATATTACTGTGCGAATTTGGAGGGCCTCGCCTCGGGTA  270
V  89.5% (221/247)  IGHV3-30*18  227  .G......C...A......................GCT............G.G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD4-17*01  5    ----------------------------------------------------------------------------------------..  6

                                      --------CDR3-IMGT----------------------------------->                              
                                      T  V  I  S  L  E  R  S  Q  D  S  Y  F  Y  A  L  A  V  W  G  Q  G  T  P  V  T  V  S 
                    Query_4028   271  CGGTGATAAGTCTTGAACGATCACAGGACTCCTACTTCTACGCCCTGGCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCC  353
D  100.0% (8/8)     IGHD4-17*01  7    ......-----------------------------------------------------------------------------  12
J  87.5% (49/56)    IGHJ6*02     4    ---------------------------...A.....A.....GTA...A...................A..............  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_135532

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-10*01                                                                                           21.8    0.042
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CAGTTTCTGTCTTAGTT	TGGTCCGGGGAGTT	TGTGGTGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGTTTCTGTCTTAGTTTGGTCCGGGGAGTTTGTGGTGGTTTTGATATC	ARGSFCLSLVRGVCGGFDI	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  N  G  G  S  F  N  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4029   1    ACCCTGTCCCTCACCTGCGCCGTCAATGGTGGGTCCTTCAATGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAG  90
V  95.1% (233/245)  IGHV4-34*01  49   ....................T...T...............G..G.......................................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  Q  S  G  T  T  N  Y  K  P  S  L  K  S  R  V  T  T  S  V  D  T  S  K  N 
                    Query_4029   91   TGGATTGGGGAAATCAATCAAAGTGGAACCACCAACTACAAGCCGTCCCTCAAGAGTCGAGTAACCACATCAGTGGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  ....................T.......G............C....................C....T......A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  F  C  L  S  L  V  R 
                    Query_4029   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCAGTTTCTGTCTTAGTTTGGTCCGG  270
V  95.1% (233/245)  IGHV4-34*01  229  ...................G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  92.9% (13/14)    IGHD3-10*01  10   ----------------------------------------------------------------------------------....T...  17

                                      ----------------------->                               
                                       G  V  C  G  G  F  D  I  W  G  Q  G  T  M  V  T  V  S  
                    Query_4029   271  GGAGTTTGTGGTGGTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTT  325
D  92.9% (13/14)    IGHD3-10*01  18   ......-------------------------------------------------  23
J  100.0% (41/41)   IGHJ3*02     7    --------------.........................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_135533

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            335     4e-94
IGHD3-16*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGG	GTTTTGGGGAGTTAT	TGGCCTTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGGGTTTTGGGGAGTTATTGGCCTTCA	ARRVLGSYWPS	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  S  F  F  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4030   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCTCCTTCTTTAGTTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (231/248)  IGHV3-7*03   47   .....................C.............A....TAG...C...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  T  E  K  Y  Y  L  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4030   91   AGTGGGTGGCCAACATAAAGCAAGATGGAACTGAGAAATACTATCTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.1% (231/248)  IGHV3-7*03   137  ..............................G.............G.............................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  R  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  R  V  L  G  S  Y  W  
                    Query_4030   181  AGAGGTCCCTGTACCTGCAAATGAACAGCCTAAGAGCCGAGGACACGGCCGTTTACTTCTGTGCGAGAAGGGTTTTGGGGAGTTATTGGC  270
V  93.1% (231/248)  IGHV3-7*03   227  ...AC..A.....T.................G....................G..T.A..........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD3-16*01  14   -----------------------------------------------------------------------....G..........----  28

                                      ---->                                  
                                      P  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4030   271  CTTCATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (34/34)   IGHJ4*02     15   -----..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_202422

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           372     2e-105
IGHD4-4*01                                                                                            19.9    0.16  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCGGGCCCTT	CAGTAACTAC	AATCTTCACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCGGGCCCTTCAGTAACTACAATCTTCACCACTTTGACTAC	ATGPFSNYNLHHFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	242	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4031   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (242/246)  IGHV3-48*03  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  Y  G  G  T  I  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4031   91   AGTGGGTTTCATACATTAGTAGTTATGGTGGTACCATATACTACACAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (242/246)  IGHV3-48*03  137  .......................AG....A..............G.............................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  G  P  F  S  N  Y  N  
                    Query_4031   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGACCGGGCCCTTCAGTAACTACAATC  270
V  98.4% (242/246)  IGHV3-48*03  227  ..................................................................------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD4-4*01   7    ----------------------------------------------------------------------------..........----  16

                                      ---------------->                                  
                                      L  H  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4031   271  TTCACCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (45/45)   IGHJ4*02     4    ------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_299089

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           364     5e-103
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAC	TATTATTATGGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTATTATTATGGTTCGGGGAGTTATTTTGACTAC	ARGHYYYGSGSYFDY	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	113	1	0	99.1
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  F  S  S  G  G  Y  Y  W  N  W  I  R  Q  H  P  G  K  G  
                    Query_4032   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCTTCAGCAGTGGTGGTTACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  96.8% (241/249)  IGHV4-31*02  50   .....TCC...A.......................A........................G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_4032   94   TGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACATCTA  183
V  96.8% (241/249)  IGHV4-31*02  140  ..............T......................................................................G....  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  Y  Y  Y  G  S  
                    Query_4032   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTATTATTATGGTTCGG  273
V  96.8% (241/249)  IGHV4-31*02  230  .....................................................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  95.8% (23/24)    IGHD3-10*01  2    --------------------------------------------------------------------------.....C..........  17

                                      ---------------->                                  
                                      G  S  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4032   274  GGAGTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  95.8% (23/24)    IGHD3-10*01  18   ........-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    --------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_235500

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           372     2e-105
IGHD3-3*01                                                                                            23.8    0.012 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTTTGGAGGGGA	TTTTGGAGTGGT	AGAGCTGTCCTTGTGGGACA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACTTTGGAGGGGATTTTGGAGTGGTAGAGCTGTCCTTGTGGGACAACTACTTCTACGGTATGGGCGTC	AKDFGGDFGVVELSLWDNYFYGMGV	243	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4033   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.6% (244/250)  IGHV3-30*18  47   ....................................C.........C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  N  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4033   91   AGTGGGTGGCAGTTATATCAAATGATGGAAGTAATAAATACTATGCAGATTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  97.6% (244/250)  IGHV3-30*18  137  ....................T............................C........................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  D  F  G  G  D  F  G  
                    Query_4033   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTATATATTACTGTGCGAAAGACTTTGGAGGGGATTTTGGAG  270
V  97.6% (244/250)  IGHV3-30*18  227  ..................................................G.G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD3-3*01   11   ----------------------------------------------------------------------------------........  18

                                      -----CDR3-IMGT-------------------------------->                                
                                      V  V  E  L  S  L  W  D  N  Y  F  Y  G  M  G  V  W  G  Q  G  T  T  V  S  V  S  S
                    Query_4033   271  TGGTAGAGCTGTCCTTGTGGGACAACTACTTCTACGGTATGGGCGTCTGGGGCCAAGGGACCACGGTCAGTGTCTCCTC  349
D  100.0% (12/12)   IGHD3-3*01   19   ....---------------------------------------------------------------------------  22
J  92.7% (51/55)    IGHJ6*02     7    ------------------------......A...........A..........................CC........  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_248423

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           369     2e-104
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CCGGAGGCAAAGACCCCAAG	ATTACTATGGTTCGGGGAGTT	CA	TACAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCCGGAGGCAAAGACCCCAAGATTACTATGGTTCGGGGAGTTCATACAACTACTACGGTATGGACGTC	ARRQRPQDYYGSGSSYNYYGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	240	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4034   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.4% (240/244)  IGHV3-33*01  47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_4034   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGACTCACCATCTCCAGAGACAATTCCA  180
V  98.4% (240/244)  IGHV3-33*01  137  .................................................................T........................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  R  Q  R  P  Q  D  Y  
                    Query_4034   181  AGAACACGTTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCCCGGAGGCAAAGACCCCAAGATTACT  270
V  98.4% (240/244)  IGHV3-33*01  227  ........C.....C.................................................--------------------------  290
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (21/21)   IGHD3-10*01  3    ------------------------------------------------------------------------------------......  8

                                      --CDR3-IMGT----------------------------->                                 
                                      Y  G  S  G  S  S  Y  N  Y  Y  G  M  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_4034   271  ATGGTTCGGGGAGTTCATACAACTACTACGGTATGGACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  344
D  100.0% (21/21)   IGHD3-10*01  9    ...............-----------------------------------------------------------  23
J  96.5% (55/57)    IGHJ6*02     6    -----------------...T...........................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_235503

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD1-1*01                                                                                            18.0    0.59 
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCAGTG	GGTACAACT	TTGGGAAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGGTACAACTTTGGGAATAACTGGTTCGACCCG	ARDPTGSGYNFGNNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  H  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4035   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGTCATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ...............................G..........AG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  K  G  G  I  T  S  H  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_4035   91   TGGATTGGATATGTCTATAAGGGCGGGATCACCAGCCACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  93.1% (228/245)  IGHV4-59*01  139  ........G...A.....T.CA.T....G.....A.T...................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  H  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_4035   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCTGACACGGCCATATATCACTGTGCGAGAGATCCTACCGGCAGTGGGTACAACTTT  270
V  93.1% (228/245)  IGHV4-59*01  229  ...................................G.........G.G...T.............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD1-1*01   1    -------------------------------------------------------------------------------.........--  9

                                      -------------------->                                  
                                       G  N  N  W  F  D  P  W  G  P  G  T  L  V  T  V  S  S  
                    Query_4035   271  GGGAATAACTGGTTCGACCCGTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  325
J  95.9% (47/49)    IGHJ5*02     3    ------..............C.......A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_235504

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-16*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCT	TTACGTTTGGGGGAGCTATG	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTTTACGTTTGGGGGAGCTATGGACTACTTTGACTAC	ARGLFTFGGAMDYFDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  V  A  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_4036   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGTCGCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  94.8% (236/249)  IGHV4-31*03  50   .....TCC...A..................G.T..........................................A..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  R  G  S  T  Y  S  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_4036   94   TGGAGTGGATTGGGTACATCTATTACCGTGGGAGCACGTACTCCAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  94.8% (236/249)  IGHV4-31*03  140  ..........................A..........C....A...............................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  L  S  V  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  F  T  F  G  G  
                    Query_4036   184  AGAACCAGTTGTCCGTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTATTGTGCGAGAGGCCTCTTTACGTTTGGGGGAG  273
V  94.8% (236/249)  IGHV4-31*03  230  ..........C...C...........................................C..........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  95.0% (19/20)    IGHD3-16*01  10   ---------------------------------------------------------------------------...............  24

                                      T------------------>                                  
                                      A  M  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4036   274  CTATGGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.0% (19/20)    IGHD3-16*01  25   T....-------------------------------------------------  29
J  100.0% (48/48)   IGHJ4*02     1    ------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_235505

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD6-19*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TTCCTCT	TGGCTGG	GACC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATTCCTCTTGGCTGGGACCTGATGCTTTTCAAATC	ARDSSWLGPDAFQI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4037   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGAAGTTACTACTGGAATTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ...............................G.........T.............GC.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  S  G  T  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  G  D  T  S  K  N 
                    Query_4037   91   TGGATTGGGTATATGTATTACAGTGGGACTACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGGAGACACGTCTAAGAAC  180
V  93.1% (228/245)  IGHV4-59*01  139  ..............C.............GC.....................A.....................T.........C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  F  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  L  G  P  D  A 
                    Query_4037   181  CAATTTTTCCTGACGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGGGATTCCTCTTGGCTGGGACCTGATGCT  270
V  93.1% (228/245)  IGHV4-59*01  229  ..G..C.C.....A.C.....................................C........A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD6-19*01  12   ------------------------------------------------------------------------.......-----------  18
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------------------.......  7

                                      -------->                                  
                                       F  Q  I  W  G  Q  G  T  I  V  T  V  S  S  
                    Query_4037   271  TTTCAAATCTGGGGCCAGGGGACAATTGTCACCGTGTCTTCAG  313
J  90.0% (45/50)    IGHJ3*02     8    ...G.T...........A........G........C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_235507

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           302     3e-84
IGHD3-10*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	CCCCTGACGTT	TTACTATACTTCGGGGAG	CCTATCCTAGGTCG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGCCCCTGACGTTTTACTATACTTCGGGGAGCCTATCCTAGGTCGTGCTCTTGATATC	AKAPDVLLYFGEPILGRALDI	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	221	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  P  D  S  E  V  T  F  T  T  C  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4038   1    GGTCCCTGAGACTCTCCTGTCCAGACTCTGAAGTCACCTTTACCACCTGTGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  88.8% (221/249)  IGHV3-23*01  47   ....................G...C.....G.T.........G..G..A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  A  S  G  V  N  T  Y  Y  A  D  S  A  K  G  R  F  T  L  S  R  D  N  S  
                    Query_4038   91   AGTGGGTCGCGTCTATTTCTGCGAGTGGTGTTAACACATACTACGCAGACTCCGCGAAAGGCCGGTTCACCCTCTCCAGAGACAATTCCC  180
V  88.8% (221/249)  IGHV3-23*01  137  ........T.AG.....AG..GT.......G..G....................T...G............A.................A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      Q  N  T  L  L  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  P  D  V  L  L  Y  
                    Query_4038   181  AGAACACACTACTTCTGCAGATGGACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCAAAAGCCCCTGACGTTTTACTATACT  270
V  88.8% (221/249)  IGHV3-23*01  227  .......G..GTA......A...A........................................G....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.9% (16/18)    IGHD3-10*01  4    --------------------------------------------------------------------------------.......GG.  13

                                      DR3-IMGT-------------------------->                                  
                                      F  G  E  P  I  L  G  R  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4038   271  TCGGGGAGCCTATCCTAGGTCGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  339
D  88.9% (16/18)    IGHD3-10*01  14   ........-------------------------------------------------------------  21
J  97.9% (46/47)    IGHJ3*02     4    ----------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_93200

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD3-10*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAC	TATTACTATGCTTCGGGGAATTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTATTACTATGCTTCGGGGAATTATTTTGACTAC	ARGHYYYASGNYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4039   1    ACCCTGTCCCTCACCTGCACTGTTTCTGGTGGCTCCGTCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   .......................C............A....C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4039   91   CTGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAATCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ...............T...............................C..........................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  Y  Y  Y  A  S 
                    Query_4039   181  AAGAACCAGTTCTCCCTGAAGCTGAGATCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTATTACTATGCTTCG  270
V  97.6% (244/250)  IGHV4-31*03  229  ..........................C...........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (22/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------..........G....  16

                                      ----------------->                                  
                                       G  N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4039   271  GGGAATTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  91.7% (22/24)    IGHD3-10*01  17   ....G....-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    ---------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_21060

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            338     5e-95
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCTT	TTCGGGGA	A	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCTTTTCGGGGAAAACTGGTTCGGCCCC	ARRLFGENWFGP	267	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	77	27	23	4	0	85.2
FR2-IMGT	78	128	51	49	2	0	96.1
CDR2-IMGT	129	149	21	18	3	0	85.7
FR3-IMGT	150	266	117	103	11	3	88
CDR3-IMGT (germline)	267	272	6	6	0	0	100
Total	N/A	N/A	272	246	23	3	90.4


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Q  I  W  W  S  W  V  
                    Query_4040   1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCACCTGCACTGTTTCTGGTGGCTCCATCAGCAGTCAGATCTGGTGGAGTTGGGTCC  90
V  90.4% (246/272)  IGHV4-4*02   26   ................T........................G....C.....................AGT.A.................  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  A  P  G  K  G  L  E  W  I  G  E  I  L  H  S  G  S  T  T  T  Y  I  P  S  L  E  S  R  
                    Query_4040   91   GCCAGGCCCCAGGGAAGGGGCTTGAGTGGATTGGGGAAATCCTTCATAGCGGGAGCACCACCACTTACATCCCGTCCCTCGAGAGTCGAG  180
V  90.4% (246/272)  IGHV4-4*02   116  .....C................G..................TA......T..........A.---....A..........A.........  202
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N     Y  N  P  S  L  K  S  R  

                                      -----------------------FR3-IMGT------------------------------------------------------><---
                                      V  T  I  S  I  D  K  S  K  N  Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  I  Y  Y  C  A  
                    Query_4040   181  TCACCATCTCAATCGACAAGTCCAAGAACCAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCGGACACGGCCATATATTATTGTGCGA  270
V  90.4% (246/272)  IGHV4-4*02   203  .......A...G.A............................A......C........................G.G.....C.......  292
                                      V  T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------CDR3-IMGT------------>                                  
                                      R  R  L  F  G  E  N  W  F  G  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4040   271  GACGTCTTTTCGGGGAAAACTGGTTCGGCCCCTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  336
V  90.4% (246/272)  IGHV4-4*02   293  ..----------------------------------------------------------------  294
                                      R                                                                 
D  100.0% (8/8)     IGHD3-10*01  13   --------........--------------------------------------------------  20
J  95.9% (47/49)    IGHJ5*02     3    -----------------..........A...........A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_132867

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           367     6e-104
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4041   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4041   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.2% (242/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_4041   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  97.2% (242/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_4041   271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_93202

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCGACC	GGGTACATCAGTGGC	GGCA	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCGACCGGGTACATCAGTGGCGGCATCGACCTC	AKATGYISGGIDL	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	24	16	5	3	66.7
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	247	222	22	3	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  D  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4042   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCAGTTTTGACACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  89.9% (222/247)  IGHV3-23*01  47   .....................C..............CC...AG..G.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  S  S  G     G  D  N  T  Y  Y  A  D  S  V  K  G  R  F  A  L  S  R  D  N  S  
                    Query_4042   91   AATGGGTCTCAGGTTCTAGTGGT---GGTGATAATACATACTACGCAGACTCCGTGAAGGGCCGGTTCGCCCTCTCCAGAGACAATTCCA  177
V  89.9% (222/247)  IGHV3-23*01  137  .G..........C.AT.......AGT....G..GC.................................A..A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  S  T  L  Y  L  H  M  N  G  L  R  V  E  D  T  A  I  Y  Y  C  A  K  A  T  G  Y  I  S  G  
                    Query_4042   178  AGAGCACACTGTATCTGCACATGAACGGCCTGAGAGTCGAGGACACGGCCATATATTACTGTGCGAAGGCGACCGGGTACATCAGTGGCG  267
V  89.9% (222/247)  IGHV3-23*01  227  ...A...G...........A......A.........C.............G................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  86.7% (13/15)    IGHD6-19*01  1    --------------------------------------------------------------------------.....T.G.......-  15

                                      ---------->                                  
                                      G  I  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4042   268  GCATCGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.6% (41/42)    IGHJ5*02     10   ---......C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_132866

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     1e-109
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	291	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	66	5	0	93
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	297	7	6	1	0	85.7
Total	N/A	N/A	291	269	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  
                    Query_4043   7    TGCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATC  96
V  92.4% (269/291)  IGHV5-51*01  5    .....................C........A.....................G.........A......C.........C.......GCT  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      H  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  
                    Query_4043   97   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCC  186
V  92.4% (269/291)  IGHV5-51*01  95   ....................................................G.......A.....G.......G....C.....C....  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  
                    Query_4043   187  CGTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCG  276
V  92.4% (269/291)  IGHV5-51*01  185  ................G........C...................................G.......G....................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------CDR3-IMGT----------->                                  
                                      A  L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_4043   277  CCTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  357
V  92.4% (269/291)  IGHV5-51*01  275  ..A.......C.....G....------------------------------------------------------------  295
                                      A  M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   -----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    ------------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_37564

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           427     1e-121
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTC	ARHGDDSGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	282	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_4044   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCACCTA  90
V  96.9% (282/291)  IGHV5-51*01  6    ..............................A...................A...................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  T  R  Y  S  P
                    Query_4044   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGGGACTCTGATACCAGATACAGCCC  180
V  96.9% (282/291)  IGHV5-51*01  96   ........G.................................................T.......T.......................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4044   181  GTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (282/291)  IGHV5-51*01  186  .......C...................A.C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  D  S  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_4044   271  CATGTATTACTGTGCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  96.9% (282/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------........A.....-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------.......AC.....T.............................  49

                                                   
                                        T  V  S  S 
                    Query_4044   361  CACCGTCTCCTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_107015

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           427     9e-122
IGHD6-19*01                                                                                           21.8    0.045 
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCAGG	GCAGTGGCTGG	CACG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTC	ARVPGQWLARGMDV	286	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	171	21	18	3	0	85.7
FR3-IMGT	172	285	114	112	2	0	98.2
CDR3-IMGT (germline)	286	292	7	7	0	0	100
Total	N/A	N/A	291	282	9	0	96.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  
                    Query_4045   2    AGATGCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTA  91
V  96.9% (282/291)  IGHV3-53*01  2    ..G...........G...........................................................................  91
                                         V  Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  

                                      T------><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------
                                      S  S  Y  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  M  Y  S  G  G  T  T  Y  Y  A  
                    Query_4045   92   GCAGCTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATGTATAGCGGTGGGACCACATACTACGCAG  181
V  96.9% (282/291)  IGHV3-53*01  92   ...A........G................................................T...........T.G..............  181
                                      S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  
                    Query_4045   182  AGTCCGTGAAGGGCCGATTCACCATCTCAAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGG  271
V  96.9% (282/291)  IGHV3-53*01  182  .C..........................C.............................................................  271
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                 
                                      A  V  Y  Y  C  A  R  V  P  G  Q  W  L  A  R  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4045   272  CCGTGTATTACTGTGCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  360
V  96.9% (282/291)  IGHV3-53*01  272  .....................--------------------------------------------------------------------  292
                                      A  V  Y  Y  C  A  R                                                                      
D  100.0% (11/11)   IGHD6-19*01  8    ----------------------------...........--------------------------------------------------  18
J  100.0% (46/46)   IGHJ6*02     17   -------------------------------------------..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_253724

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           363     2e-102
IGHD6-19*01                                                                                           27.6    8e-04 
IGHJ6*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	AG	ATAGCAGTGGCTGG	GACGGGCTGGGTAACTGGTAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGAAGATAGCAGTGGCTGGGACGGGCTGGGTAACTGGTATTACGGGATGGACGTC	TTEDSSGWDGLGNWYYGMDV	249	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	110	4	0	96.5
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	244	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4046   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTCAGTAACGCATGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.3% (244/256)  IGHV3-15*01  47   .......T............................C............C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  M  K  S  N  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  V  S  R  D  
                    Query_4046   91   AGTGGGTCGGCCGCATGAAAAGCAACACTGATGGCGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCGTCTCAAGAGATG  180
V  95.3% (244/256)  IGHV3-15*01  137  .......T.....T..T........A........T..........................................A............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  K  M  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  E  D  S  S  G  
                    Query_4046   181  ATTCAAAAAAGATGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTATTGTACCACAGAAGATAGCAGTGGCT  270
V  95.3% (244/256)  IGHV3-15*01  227  ..........C.C...................................................C...........--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (14/14)   IGHD6-19*01  5    ------------------------------------------------------------------------------............  16

                                      ----CDR3-IMGT------------------------>                                 
                                      W  D  G  L  G  N  W  Y  Y  G  M  D  V  W  G  Q  G  T  P  V  P  V  S  S 
                    Query_4046   271  GGGACGGGCTGGGTAACTGGTATTACGGGATGGACGTCTGGGGCCAAGGGACCCCGGTCCCCGTCTCCTCA  341
D  100.0% (14/14)   IGHD6-19*01  17   ..---------------------------------------------------------------------  18
J  93.8% (45/48)    IGHJ6*02     15   -----------------------.....T........................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_107013

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           260     1e-71
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	93	21	0	81.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	205	39	0	84


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_4047   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  84.0% (205/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_4047   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  84.0% (205/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_4047   181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACGTAT  270
V  84.0% (205/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_4047   271  GTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    ---------------------------------...G....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_107010

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         386     1e-109
IGHD4-4*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTCGAGTGGAATCGAGTGAC	ACTACAGT	CCTTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCGAGTGGAATCGAGTGACACTACAGTCCTTCCTGACTCG	ATRVESSDTTVLPDS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	267	20	0	93


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  T  F  T  D  S
                    Query_4048     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACACCTTTACTGATTC  90
V  93.0% (267/287)  IGHV5-10-1*01  6    .............................................................................G......CAGC.A  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  N  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  K  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_4048     91   CTGGATCAACTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGAAAAATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  93.0% (267/287)  IGHV5-10-1*01  96   ........G.............A............................G.GG...................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  M  S  I  D  T  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4048     181  GTCCTTCCAAGGCCACGTCACCATGTCTATTGACACGTCCATCAGCACTGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.0% (267/287)  IGHV5-10-1*01  186  ........................C..AGC.....A.................A....................................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          T  Y  F  C  A  T  R  V  E  S  S  D  T  T  V  L  P  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4048     271  CACATATTTCTGTGCGACTCGAGTGGAATCGAGTGACACTACAGTCCTTCCTGACTCGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  93.0% (267/287)  IGHV5-10-1*01  276  ..TG....A........-------------------------------------------------------------------------  292
                                          M  Y  Y  C  A                                                                           
D  100.0% (8/8)     IGHD4-4*01     3    -------------------------------------........---------------------------------------------  10
J  94.9% (37/39)    IGHJ4*02       8    ---------------------------------------------------.....AC................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_41150

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         357     1e-100
IGHD1-26*01                                                                                           18.0    0.56  
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	TATAGTGGG	GGGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTATAGTGGGGGGGGCTTTGACTAC	ARDYSGGGFDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_4049     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGCTATGCAGTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-30-3*01  47   ..............................................C...........C...............................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4049     91   AGTGGGTGGCAGTTATATCATATGATGGAAGCAACAAATACTACACAGACTCCGTGAAGGGCCGATTCACCATCTCGAGAGACAATTCCA  180
V  95.6% (239/250)  IGHV3-30-3*01  137  ..................................T.........G...............................C.............  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                        K  N  K  V  Y  L  Q  M  D  S  L  R  V  E  D  T  A  L  Y  Y  C  A  R  D  Y  S  G  G  G  F  
                    Query_4049     181  AGAACAAGGTATATCTGCAAATGGACAGCCTGAGAGTTGAGGACACGGCTTTGTATTACTGTGCGAGAGACTATAGTGGGGGGGGCTTTG  270
V  95.6% (239/250)  IGHV3-30-3*01  227  ......C.C.G............A............C.............G...................--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD1-26*01    3    -----------------------------------------------------------------------.........----------  11
J  100.0% (44/44)   IGHJ4*02       5    -------------------------------------------------------------------------------------.....  9

                                        ---->                                  
                                        D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4049     271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (44/44)   IGHJ4*02       10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_238623

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           411     5e-117
IGHD3-22*01                                                                                           39.1    3e-07 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CATAATTAT	GTATTACTATGATGGTACTGGCTATTACT	CGTCCCACC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACATAATTATGTATTACTATGATGGTACTGGCTATTACTCGTCCCACCTTGACTAC	ARDIIMYYYDGTGYYSSHLDY	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  T  F  N  N  Y
                    Query_4050   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAACAACTA  90
V  95.2% (277/291)  IGHV1-69*06  6    ..................G..........A............................................G........G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  F  I  P  I  F  G  T  P  N  Y  A  R
                    Query_4050   91   TGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGCCTTGAGTGGATGGGAGGGTTCATCCCGATCTTTGGTACACCAAACTACGCACG  180
V  95.2% (277/291)  IGHV1-69*06  96   ..C.................................G..................A.......T............G............A  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  R  S  T  R  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_4050   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAGATCCACGCGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.2% (277/291)  IGHV1-69*06  186  ...................................A.......A..............................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        V  Y  F  C  A  R  D  I  I  M  Y  Y  Y  D  G  T  G  Y  Y  S  S  H  L  D  Y  W  G  Q  G  T
                    Query_4050   271  CGTGTATTTCTGTGCGAGAGACATAATTATGTATTACTATGATGGTACTGGCTATTACTCGTCCCACCTTGACTACTGGGGCCAGGGAAC  360
V  95.2% (277/291)  IGHV1-69*06  276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  89.7% (26/29)    IGHD3-22*01  1    ------------------------------.............A...G...T.......-------------------------------  29
J  100.0% (42/42)   IGHJ4*02     7    --------------------------------------------------------------------......................  28

                                                          
                                        L  V  T  V  S  S  
                    Query_4050   361  CCTGGTCACCGTCTCCTCAG  380
J  100.0% (42/42)   IGHJ4*02     29   ....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_93208

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-20*01                                                                                           347     7e-98
IGHD3-22*01                                                                                           12.2    31   
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-20*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGGGCACTG	GGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGATGGGGCACTGGGTTATTACTATGGTATCGACGTC	VRDGALGYYYGIDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  E  K  G  L  
                    Query_4051   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTTGATGATTATGGCATGAGCTGGGTCCGCCAAGCTCCGGAGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-20*01  47   ...............................A............................................A.G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  H  W  N  G  A  S  T  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  A  
                    Query_4051   91   AGTGGGTCTCTGGTATTCATTGGAATGGTGCAAGTACAGCTTATGCAGACTCGGTGAAGGGCCGATTCACCATTTCCAGAGACATTGCCA  180
V  94.4% (236/250)  IGHV3-20*01  137  .................A............GT..C....G............T....................C..........AC....  226
                                      E  W  V  S  G  I  N  W  N  G  G  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  V  R  D  G  A  L  G  Y  Y  
                    Query_4051   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCCTTGTATCACTGTGTGCGAGATGGGGCACTGGGTTATTACT  270
V  94.4% (236/250)  IGHV3-20*01  227  ...............................................................C.A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R                       
D  100.0% (6/6)     IGHD3-22*01  20   --------------------------------------------------------------------------------......----  25
J  94.1% (48/51)    IGHJ6*02     12   --------------------------------------------------------------------------------------....  15

                                      ------------->                                 
                                      Y  G  I  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_4051   271  ATGGTATCGACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  317
J  94.1% (48/51)    IGHJ6*02     16   .C.....G.............A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_161182

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD6-25*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTC	ARQSSAGRTKYGMDV	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	68	6	0	91.9
CDR1-IMGT	77	100	24	17	7	0	70.8
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	104	10	0	91.2
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	270	25	0	91.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  R  S  S  G  Y  D  F  L  
                    Query_4052   3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGCTAAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGAGTTCTGGGTACGACTTTCTCG  92
V  91.5% (270/295)  IGHV5-51*01  2    .............................G.G..A.....C.........................A.G.......A...AG....AC.A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_4052   93   ACTACTGGATCGTCTGGGTGCGCCAAATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACA  182
V  91.5% (270/295)  IGHV5-51*01  92   G...........G............G..........................................................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  G  D  K  S  N  S  T  A  F  L  Q  W  R  S  L  K  A  S  G  
                    Query_4052   183  GTCCGTCCTTCCAAGGCCAGGTCACCATCTCAGGCGACAAGTCCAACAGTACCGCCTTCCTGCAGTGGCGCAGTCTGAAGGCCTCGGGCA  272
V  91.5% (270/295)  IGHV5-51*01  182  .C...............................C...........T...C.......A..........A....C.............A..  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  P  V  A  V  
                    Query_4052   273  CCGCCAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTCTGGGGCCAAGGGACCCCGGTCGCTGTCT  362
V  91.5% (270/295)  IGHV5-51*01  272  ......T..................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD6-25*01  7    --------------------------.......---------------------------------------------------------  13
J  93.8% (45/48)    IGHJ6*02     15   -----------------------------------------------..............................A.....A.C....  57

                                           
                                      S  S 
                    Query_4052   363  CCTCA  367
J  93.8% (45/48)    IGHJ6*02     58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_93209

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ2*01                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	TACTATAATCCTAGTGGTTATTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACTATAATCCTAGTGGTTATTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGYYGYWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	239	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_4053   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.6% (239/245)  IGHV4-59*01  49   ............................................................A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  I  S  K  N 
                    Query_4053   91   TGGATTGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGATATCTCCAAGAAC  180
V  97.6% (239/245)  IGHV4-59*01  139  ........G....................................................................C.CG.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  Y  Y 
                    Query_4053   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACTACTATAATCCTAGTGGTTATTAC  270
V  97.6% (239/245)  IGHV4-59*01  229  ...................G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (21/24)    IGHD3-22*01  5    ------------------------------------------------------------------......G..AG.............  28

                                      -------------------->                                  
                                       G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4053   271  GGGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  325
J  100.0% (52/52)   IGHJ2*01     2    ---....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_248428

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD2-8*01                                                                                            12.2    31   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GTATCC	CTAATG	CCTCCTTCA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGTATCCCTAATGCCTCCTTCAACTTTGACTAC	AKGIPNASFNFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4054   1    GGTCCCTGAGACTCTCCTGTGCAGCATCTGGATTCACCTTTACCACCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-23*01  47   .........................C................G..G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  V  I  G  V  S  D  T  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4054   91   ACTGGGTCTCAGTAATTGGTGTTAGTGATACTAAGACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-23*01  137  .G..........CT...A...G.....G.GG..GC.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  I  P  N  A  S  F  
                    Query_4054   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGGTATCCCTAATGCCTCCTTCA  270
V  94.4% (235/249)  IGHV3-23*01  227  .....................................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-8*01   12   ---------------------------------------------------------------------------......---------  17

                                      ---------->                                  
                                      N  F  D  Y  W  G  Q  G  P  L  V  T  V  S  S  
                    Query_4054   271  ACTTTGACTACTGGGGCCAGGGACCCCTGGTCACCGTCTCCTCAG  315
J  97.8% (44/45)    IGHJ4*02     4    .......................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_93638

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           307     1e-85
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	220	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  D  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4055   1    ACCCTGTCCCTCACCTGCACTGTCTCTGATGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  90.2% (220/244)  IGHV4-59*01  49   ............................G.........C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_4055   91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  90.2% (220/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P 
                    Query_4055   181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC  270
V  90.2% (220/244)  IGHV4-59*01  229  ...........G...C....C...........T............G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  95.7% (44/46)    IGHJ5*02     6    ------------------------------------------------------------------------------............  17

                                                                        
                                       W  G  Q  G  A  L  V  S  V  S  S  
                    Query_4055   271  TGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  304
J  95.7% (44/46)    IGHJ5*02     18   ............A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_327748

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD2-21*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGGGGG	ATTGTGATGGT	ATTAACTGCTTCCCCTGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGGATTGTGATGGTATTAACTGCTTCCCCTGGTACTACTATTATGGAATGCACGTC	AKGDCDGINCFPWYYYYGMHV	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	221	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  L  Y  G  G  S  F  S  G  H  Y  W  I  W  L  R  Q  S  P  G  K  G  L  E 
                    Query_4056   1    ACCCTGTCCCTCACCTGCGCTCTCTATGGTGGGTCCTTCAGTGGTCACTACTGGATTTGGCTCCGCCAGTCCCCCGGGAAGGGGCTGGAG  90
V  91.7% (221/241)  IGHV4-34*01  49   .....................G.......................T.........GC...A........C....A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  K  Y  N  S  S  L  K  S  R  V  A  M  S  I  D  A  S  K  S 
                    Query_4056   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACGAAGTACAACTCGTCCCTCAAGAGTCGAGTCGCCATGTCAATAGACGCGTCCAAGAGT  180
V  91.7% (221/241)  IGHV4-34*01  139  ................................C..C......C....................A....A...G.....A.........AC  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  Y  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  G  D  C  D  G  I  N  C  F 
                    Query_4056   181  CAATTCTACCTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAAGGGGGATTGTGATGGTATTAACTGCTTC  270
V  91.7% (221/241)  IGHV4-34*01  229  ..G....C...........G...........................G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (10/11)    IGHD2-21*01  6    -------------------------------------------------------------------......G....------------  16

                                      MGT-------------------------->                                 
                                       P  W  Y  Y  Y  Y  G  M  H  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_4056   271  CCCTGGTACTACTATTATGGAATGCACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  333
J  91.2% (52/57)    IGHJ6*02     6    ------........C..C..T...G...........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_35685

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            349     3e-98
IGHD2-8*02                                                                                            14.1    8.8  
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGTAGGCAGGAGCGTT	CTGGTGG	GAACTTCGCGAAGGGCATGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGTAGGCAGGAGCGTTCTGGTGGGAACTTCGCGAAGGGCATGGTACTTTGACAAC	ARGVGRSVLVGTSRRAWYFDN	241	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  T  N  H  N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_4057  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCAATCATAACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  90
V  95.1% (235/247)  IGHV4-4*02  49   ........................................G..G.AG.........................C.................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  T  Y  H  S  G  S  S  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  K  S  K 
                    Query_4057  91   GAGTGGATTGGGGAAACCTATCATAGTGGGAGCAGCAACTACAACCCGTCCCTCAAGAGTCGACTCACAATATCAGTGGACAAGTCCAAG  180
V  95.1% (235/247)  IGHV4-4*02  139  ................T.................C............................G....C........A............  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------------------CDR
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  R  S  V  L  V 
                    Query_4057  181  AACCAGTTCTCCCTGAAACTGAGCTCCGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGAGTAGGCAGGAGCGTTCTGGTG  270
V  95.1% (235/247)  IGHV4-4*02  229  .................G........T........................................-----------------------  295
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD2-8*02  12   ------------------------------------------------------------------------------------......  17

                                     3-IMGT-------------------------->                                  
                                      G  T  S  R  R  A  W  Y  F  D  N  W  G  Q  G  A  Q  D  I  V  S  S  
                    Query_4057  271  GGAACTTCGCGAAGGGCATGGTACTTTGACAACTGGGGCCAGGGAGCCCAGGACATCGTCTCCTCAG  337
D  100.0% (7/7)     IGHD2-8*02  18   .------------------------------------------------------------------  18
J  89.1% (41/46)    IGHJ4*02    3    ---------------------.........T..............A...T..T..C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_327746

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           294     6e-82
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGACA	TGGCGACTAT	TATGATAGTAGCGGTT	TTGCAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTCGACATGGCGACTATTATGATAGTAGCGGTTTTGCAGAC	TRHGDYYDSSGFAD	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	116	63	46	5	12	73
CDR2-IMGT	117	146	30	25	5	0	83.3
FR3-IMGT	147	260	114	105	9	0	92.1
CDR3-IMGT (germline)	261	268	8	7	1	0	87.5
Total	N/A	N/A	268	230	26	12	85.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------------FR2-IMGT--
                                         S  L  R  L  S  C  A  A  S  G  I  S  F  S  D  S  S  Q  Y  S  S  I  H  W  V  R  Q  A  P  
                    Query_4058   1    GGTCCCTGAGACTCTCCTGTGCAGCTTCTGGGATCTCCTTCAGTGACTCTTCTCAGTACTCTTCTATACACTGGGTCCGCCAGGCTCCCG  90
V  85.8% (230/268)  IGHV3-73*01  47   .........A...............C......T..A.........G....G..------------..G..................T...  124
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A              M  H  W  V  R  Q  A  S  

                                      -------------------------><----------CDR2-IMGT---------><---------------------------------
                                      G  R  G  L  E  W  L  G  R  M  R  S  K  P  N  A  Y  A  T  T  Y  A  A  S  V  K  G  R  F  T  
                    Query_4058   91   GGAGAGGCCTGGAGTGGCTTGGCCGTATGAGAAGCAAACCTAACGCATACGCGACAACATATGCTGCGTCGGTGAAAGGCAGGTTCACCA  180
V  85.8% (230/268)  IGHV3-73*01  125  ...A...G.........G..........T.........G.....AGT.........G.................................  214
                                      G  K  G  L  E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  R  D  D  P  K  N  M  A  Y  L  Q  M  N  S  L  K  A  E  D  T  A  M  Y  Y  C  T  R  H  
                    Query_4058   181  TTTCCAGAGATGACCCAAAGAACATGGCGTATCTGCAAATGAACAGCCTGAAAGCCGAGGACACGGCCATGTACTATTGTACTCGACATG  270
V  85.8% (230/268)  IGHV3-73*01  215  .C...........TT.........C............................A..............G....T..C......A....--  302
                                      I  S  R  D  D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R     

                                      -------CDR3-IMGT--------------->                                  
                                      G  D  Y  Y  D  S  S  G  F  A  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4058   271  GCGACTATTATGATAGTAGCGGTTTTGCAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  93.8% (15/16)    IGHD3-22*01  8    --------...........T....------------------------------------------  23
J  100.0% (36/36)   IGHJ4*02     13   ------------------------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_93630

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           355     3e-100
IGHD3-22*01                                                                                           27.6    8e-04 
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	CAGG	ACTATGATAGTAGT	AGGGGGG	ACGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAGGACTATGATAGTAGTAGGGGGGACGATAAGGACGTC	VRQDYDSSRGDDKDV	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  G  S  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4059   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAACAGTGGTAGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.6% (238/249)  IGHV4-31*03  49   ........................................G.......G.........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  S  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  S  M  S  V  D  T  S 
                    Query_4059   91   CTGGAGTGGATTGGATACATCTATTCCAGTGGGAGTACCTACTACAACCCGTCCCTCAAGAGTCGAGTTAGCATGTCCGTAGACACGTCT  180
V  95.6% (238/249)  IGHV4-31*03  139  ..............G..........A.........C..................................C...A..A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  H  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  Q  D  Y  D  S  S  R 
                    Query_4059   181  AAGAACCACTTCTCCCTGAACCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGTGAGACAGGACTATGATAGTAGTAGG  270
V  95.6% (238/249)  IGHV4-31*03  229  ........G...........G...........................................C....---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (14/14)   IGHD3-22*01  6    -------------------------------------------------------------------------..............---  19

                                      ----------------->                                 
                                       G  D  D  K  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4059   271  GGGGACGATAAGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  321
J  95.7% (45/47)    IGHJ6*02     16   ----...G..T........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_93633

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q 
                    Query_4060   1    ACCCTGTCCCTCACCTGCACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAA  90
V  91.0% (223/245)  IGHV4-59*01  49   ....................T..........................C........C............C.................G.G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_4060   91   TGGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAAC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A....G.....C...T....T....G......C..............C...........C.C.........A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E 
                    Query_4060   181  CAGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTCGGGTTTAATGACTACGGTGAG  270
V  91.0% (223/245)  IGHV4-59*01  229  ...T.........AG..G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  1    -----------------------------------------------------------------------------............-  12

                                      -------------->                                  
                                       D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4060   271  GATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  319
J  92.5% (37/40)    IGHJ4*02     9    ---------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_327745

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           321     7e-90
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACAGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACAGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4061   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.2% (224/243)  IGHV4-34*01  49   ................................G...T..................G...........................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  L  S  L  D  M  S  K  K 
                    Query_4061   91   TGGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGCGTCTCCTTATCATTAGACATGTCCAAGAAG  180
V  92.2% (224/243)  IGHV4-34*01  139  .............................C..................C..A.......A...A..A.....G......C.........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  V  K  V  T  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y 
                    Query_4061   181  CAGTTCTCCGTGAAGGTGACGTCTGTGGCCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAACAGTAAAGGGGGTTATTACTGTCTAC  270
V  92.2% (224/243)  IGHV4-34*01  229  .........C.....C...GC......A...................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  20   --------------------------------------------------------------------------..........------  29

                                      -------------------->                                 
                                       Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4061   271  CAGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  100.0% (40/40)   IGHJ6*02     23   --------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_327742

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     8e-121
IGHD6-19*01                                                                                           16.1    2.5   
IGHJ5*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGTGGGGAAACAGA	AGTGGCTG	CCA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCC	ARLRGETEVAANNWFDP	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	280	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  M  G  S  G  Y  T  F  A  G  Y
                    Query_4062   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTATGGGATCTGGATACACCTTTGCCGGCTA  90
V  96.9% (280/289)  IGHV5-51*03  6    ..............................................................A...T..........G....A..A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  D  P  R  Y  S  P
                    Query_4062   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACTCTGATCCCAGATACAGCCC  180
V  96.9% (280/289)  IGHV5-51*03  96   ........G..............................................A....................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4062   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (280/289)  IGHV5-51*03  186  .......................................C..................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  L  R  G  E  T  E  V  A  A  N  N  W  F  D  P  W  G  Q  G  T  L  V  T  A
                    Query_4062   271  CATGTATTACTGTGCGAGACTTCGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGC  360
V  96.9% (280/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD6-19*01  10   ------------------------------------........----------------------------------------------  17
J  98.0% (49/50)    IGHJ5*02     1    -----------------------------------------------..........................................T  43

                                             
                                        S  S 
                    Query_4062   361  CTCCTCA  367
J  98.0% (49/50)    IGHJ5*02     44   .......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_327743

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            339     2e-95
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTTTG	ACTATGATAGTCGTGGCTTTTAC	AGACGTTCTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTTTGACTATGATAGTCGTGGCTTTTACAGACGTTCTAACTACTTTGACTTC	ARGFDYDSRGFYRRSNYFDF	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4063   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTACTAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  94.3% (231/245)  IGHV4-4*01   49   ..................G.....................GC.G......C.......................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  Q  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_4063   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCCAGTACAACCCGTCACTCAAGAGTCGAGTCACGATATCAGTAGACAAGTCCAAG  180
V  94.3% (231/245)  IGHV4-4*01   139  ....................................A.C...........C.................C.....................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------------CDR3
                                       N  Q  I  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  F  D  Y  D  S  R  G 
                    Query_4063   181  AACCAGATCTCCCTGAGGTTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGGCTTTGACTATGATAGTCGTGGC  270
V  94.3% (231/245)  IGHV4-4*01   229  ......T.........A.C....C...............................G.........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  87.0% (20/23)    IGHD3-22*01  6    -------------------------------------------------------------------------...........A....T  22

                                      -IMGT------------------------>                                  
                                       F  Y  R  R  S  N  Y  F  D  F  W  G  R  G  T  L  V  A  V  S  S  
                    Query_4063   271  TTTTACAGACGTTCTAACTACTTTGACTTCTGGGGCCGGGGAACCCTGGTCGCTGTCTCCTCAG  334
D  87.0% (20/23)    IGHD3-22*01  23   .A....----------------------------------------------------------  28
J  91.7% (44/48)    IGHJ4*02     1    ----------------............A........A.............A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_327741

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           296     2e-82
IGHD3-10*01                                                                                           18.0    0.62 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	221	22	6	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_4064   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.8% (221/249)  IGHV4-34*12  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_4064   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.8% (221/249)  IGHV4-34*12  133  .....G...................A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S 
                    Query_4064   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCC  270
V  88.8% (221/249)  IGHV4-34*12  223  ....................GC............C........................C.........---------------------  291
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------------........G...-  15

                                      CDR3-IMGT-------------------------->                                  
                                       T  G  Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_4064   271  ACTGGTTATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  340
J  94.2% (49/52)    IGHJ1*01     1    ------------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_22131

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGAGGTTGTTGGTGTCC	TTCGGGGAGTTATT	TCCCCTTACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGAGGTTGTTGGTGTCCTTCGGGGAGTTATTTCCCCTTACCCCTTTGACTAC	AKDEVVGVLRGVISPYPFDY	237	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	122	24	13	5	6	54.2
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	250	230	14	6	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4065   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCGACTACGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  92.0% (230/250)  IGHV3-23*01  47   ............................................AG...T...................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  G  I  S        N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4065   91   AGTGGGTCTCAGCTATTGGAATTAGT------AACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  174
V  92.0% (230/250)  IGHV3-23*01  137  .................A.TGG....GGTGGT.G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  E  M  E  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  E  V  V  G  V  L  
                    Query_4065   175  AGAACACTCTGTATCTGGAAATGGAGAGCCTGAGAGCCGAGGACACGGCCCTATATTACTGTGCGAAAGATGAGGTTGTTGGTGTCCTTC  264
V  92.0% (230/250)  IGHV3-23*01  227  .......G.........C.....A.C........................G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (14/14)   IGHD3-10*01  13   ---------------------------------------------------------------------------------------...  15

                                      R3-IMGT------------------------>                                  
                                      R  G  V  I  S  P  Y  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4065   265  GGGGAGTTATTTCCCCTTACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (14/14)   IGHD3-10*01  16   ...........-------------------------------------------------------  26
J  100.0% (44/44)   IGHJ4*02     5    ----------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_107018

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           394     6e-112
IGHD3-3*01                                                                                            14.1    8.9   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	AGGAGGLFIFVAPFDY	261	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	23	1	0	95.8
FR2-IMGT	75	125	51	50	1	0	98
CDR2-IMGT	126	146	21	21	0	0	100
FR3-IMGT	147	260	114	112	2	0	98.2
CDR3-IMGT (germline)	261	268	8	7	1	0	87.5
Total	N/A	N/A	268	260	8	0	97


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  Y  G  G  S  F  S  G  Y  S  R  S  W  I  R  
                    Query_4066   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTATGGTGGGTCCTTCAGTGGTTACTCCCGGAGCTGGATCCGCC  90
V  97.0% (260/268)  IGHV4-34*01  26   ........T.......T........................G..............................A.T...............  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_4066   91   AGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCA  180
V  97.0% (260/268)  IGHV4-34*01  116  ..........................................................................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  A  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  G  
                    Query_4066   181  TATCAGCAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGGGAGGCG  270
V  97.0% (260/268)  IGHV4-34*01  206  ......T...............................................................G............A....--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  

                                      ----------CDR3-IMGT------------------>                                  
                                      A  G  G  L  F  I  F  V  A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4066   271  CAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
D  100.0% (7/7)     IGHD3-3*01   9    --------------.......---------------------------------------------------  15
J  100.0% (43/43)   IGHJ4*02     6    -----------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_284348

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           313     2e-87
IGHD2-2*01                                                                                            14.1    8.7  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGCTCGTTGTGATAA	TACCATCTGC	CCGAAAAACTTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTCGTTGTGATAATACCATCTGCCCGAAAAACTTGCTGGTTCGACCCC	ARGLVVIIPSARKTCWFDP	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	224	24	0	90.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  D  I  S  I  N  T  G  D  Y  Y  W  S  W  F  R  Q  S  P  Q  K  G 
                    Query_4067   1    ACCCTGTCCCTCACCTGCACTGTCTCTGATATCTCCATCAACACCGGTGATTACTATTGGAGCTGGTTCCGCCAGTCCCCACAGAAGGGC  90
V  90.3% (224/248)  IGHV4-31*03  49   ............................G.GG........G..GT....G......C.........A........CA....GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  F  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S 
                    Query_4067   91   CTGGAATGGATTGGGTACATCTATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAGGAGTCGAGTTAGCATTTCCATAGACACGTCT  180
V  90.3% (224/248)  IGHV4-31*03  139  .....G..................................A.................A...........C...A..AG...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  V  N  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  G  L  V  V  I  I  P 
                    Query_4067   181  AAGAACCAGTTCTCCCTGAAGGTGAACTCTGTGGCTGCCGCGGACACGGCCGTATATTACTGTGCGAGGGGGCTCGTTGTGATAATACCA  270
V  90.3% (224/248)  IGHV4-31*03  229  .....................C...G.......A...................G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.0% (9/10)     IGHD2-2*01   16   -------------------------------------------------------------------------------------.....  20

                                      3-IMGT----------------------->                                  
                                       S  A  R  K  T  C  W  F  D  P  W  G  P  G  T  L  V  S  V  S  S  
                    Query_4067   271  TCTGCCCGAAAAACTTGCTGGTTCGACCCCTGGGGCCCGGGAACCCTGGTCAGCGTCTCCTCAG  334
D  90.0% (9/10)     IGHD2-2*01   21   G....-----------------------------------------------------------  25
J  95.7% (45/47)    IGHJ5*02     5    -----------------....................A..............C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_284349

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           349     3e-98
IGHD3-16*01                                                                                           18.0    0.64 
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	278	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	277	114	95	13	6	83.3
CDR3-IMGT (germline)	278	283	6	6	0	0	100
Total	N/A	N/A	289	258	25	6	89.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P  R  Y
                    Query_4068   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCCGTTA  90
V  89.3% (258/289)  IGHV5-51*03  6    .......................................................T.....A....T..........GC..TA..A.C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_4068   91   TTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGTCC  180
V  89.3% (258/289)  IGHV5-51*03  96   C........C.......................................................G.....................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D  T  A
                    Query_4068   181  GGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACACTGC  264
V  89.3% (258/289)  IGHV5-51*03  186  .T.....C.A...................C...C........CAGCACC.C...............C..C.................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4068   265  CATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACTGTCTCTTCAG  353
V  89.3% (258/289)  IGHV5-51*03  276  ...G........T......----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD3-16*01  18   --------------------........T...---------------------------------------------------------  29
J  92.0% (46/50)    IGHJ3*01     1    ---------------------------------------......T......G.................A.......C..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_284346

Length=314
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           311     4e-87
IGHD1-1*01                                                                                            10.3    110  
IGHJ1*01                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TG	ACGAC	CTAA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGACGACCTAAAC	AKDDDLN	238	258	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	20	4	0	83.3
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	21	3	0	87.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	233	216	17	0	92.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  D  N  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I 
                    Query_4069   13   TGTGCAGCCTCTGGATTCACCTTTGATAACTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAACCATT  102
V  92.7% (216/233)  IGHV3-23*01  64   ........................AGC.G...........G...........................................G.T...  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  S  G  V  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  S  T  L  Y  L 
                    Query_4069   103  AGTGGTAGTGGAGTTACCACATACTATGCAGACTCCGTAAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAGCACGCTGTACCTG  192
V  92.7% (216/233)  IGHV3-23*01  154  ...........T.G..G.........C...........G.....................................A.........T...  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----CDR3-IMGT----->                        
                                       Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  D  D  L  N  W  G  Q  G  T  L  V  T 
                    Query_4069   193  CAAATGAACAGCCTGAGAGCCGACGACACGGCCGTTTATTACTGCGCGAAAGATGACGACCTAAACTGGGGCCAGGGCACCCTGGTCACC  282
V  92.7% (216/233)  IGHV3-23*01  244  .......................G...........A........T........-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (5/5)     IGHD1-1*01   13   -------------------------------------------------------.....------------------------------  17
J  97.2% (35/36)    IGHJ1*01     17   ----------------------------------------------------------------..........................  42

                                                
                                       V  P  S  
                    Query_4069   283  GTCCCCTCAG  292
J  97.2% (35/36)    IGHJ1*01     43   ...T......  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30304617


Query= Query_241705

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         271     7e-75
IGHD3-22*01                                                                                           14.1    8.5  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCATATGCCTACGAAGACAGAAA	TTATTAC	N/A	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATTCATATGCCTACGAAGACAGAAATTATTACTTCGACCCC	ARDSYAYEDRNYYFDP	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	56	27	24	3	0	88.9
FR2-IMGT	57	107	51	48	3	0	94.1
CDR2-IMGT	108	128	21	13	8	0	61.9
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	247	210	37	0	85


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  R  L  S  C  S  V  S  G  Y  S  V  N  S  G  Y  Y  W  A  W  I  R  Q  S  P  G  K  G  L  
                    Query_4070     4    CCCTGAGACTCTCCTGCTCTGTCTCTGGTTACTCCGTAAACAGTGGTTACTACTGGGCCTGGATCCGCCAGTCCCCAGGGAAGGGGCTGG  93
V  85.0% (210/247)  IGHV4-38-2*02  50   .....TCC...A.....A.................A.C.G.................G.........G...C..................  139
                                           L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  G  S  V  Y  R  T  G  N  M  Y  Y  S  P  S  F  G  S  R  V  T  L  L  V  D  K  A  K  
                    Query_4070     94   AGTGGATTGGGAGTGTCTATCGTACCGGTAACATGTACTACAGTCCGTCCTTCGGGAGTCGAGTCACTCTATTAGTAGACAAGGCGAAGA  183
V  85.0% (210/247)  IGHV4-38-2*02  140  ..............A......A..GT..G.G..CC.......AC......C..AA............CA...C........C.T.C....  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                        N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  Y  A  Y  E  D  R  
                    Query_4070     184  ACCAGTTCTCGTTGAGGTTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGCGAGATTCATATGCCTACGAAGACAGAA  273
V  85.0% (210/247)  IGHV4-38-2*02  230  ..........CC...A.C...G.................................C......A....-----------------------  296
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                          

                                        ---------------->                                  
                                        N  Y  Y  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4070     274  ATTATTACTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (7/7)     IGHD3-22*01    22   -.......-------------------------------------------  28
J  100.0% (43/43)   IGHJ5*02       9    --------...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_284344

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           357     1e-100
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  Q  Q  H  P  G  K  G 
                    Query_4071   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCAGCAGCACCCAGGGAAGGGC  90
V  96.0% (238/248)  IGHV4-31*03  49   ..................................C......C............................GC..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4071   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  96.0% (238/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_4071   181  AAGAACCAGTTCTCCCTGAGGCTCAGCTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  96.0% (238/248)  IGHV4-31*03  229  ...................A...G................................T...........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4071   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_284345

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           357     1e-100
IGHD3-9*01                                                                                            14.1    8.8   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CT	TTTTGAC	ACTTATGGCCGAATTAAGTCAACG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTTTGACACTTATGGCCGAATTAAGTCAACGTACTTCTACGGGATGGACGTC	ARLFDTYGRIKSTYFYGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  N  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4072   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAATAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-48*03  47   ...................................A......G...............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  T  T  I  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4072   91   AGTGGGTTTCATACATTAGTAGTAGTGGTACTACCATATCCTACGCAGACTCTGTGAAGGGCCGATTCACCATTTCCAGAGACAACGCCA  180
V  96.0% (238/248)  IGHV3-48*03  137  ..............................G........A.................................C................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  G  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  L  F  D  T  Y  G  R  
                    Query_4072   181  AGGGCTCACTGTATCTGCAGATGAACAGCCTGAGACCCGAGGACACGGCTGTCTATTACTGTGCGAGACTTTTTGACACTTATGGCCGAA  270
V  96.0% (238/248)  IGHV3-48*03  227  ..AA...............A...............G................T...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-9*01   12   ----------------------------------------------------------------------.......-------------  18

                                      R3-IMGT------------------------>                                 
                                      I  K  S  T  Y  F  Y  G  M  D  V  W  G  R  G  T  T  V  A  V  S  S 
                    Query_4072   271  TTAAGTCAACGTACTTCTACGGGATGGACGTCTGGGGCCGAGGGACCACGGTCGCCGTCTCCTCA  335
J  92.6% (50/54)    IGHJ6*02     9    -----------....A......T................A.............A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_284342

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           299     3e-83
IGHD5-12*01                                                                                           14.1    8.7  
IGHJ4*02                                                                                              46.8    3e-09


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGATAGAT	GTGGATTTAG	GCAACACGCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGATAGATGTGGATTTAGGCAACACGCCTGACTTC	ARAPIDVDLGNTPDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	220	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  R  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4073   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTTCATTCAGGAGTTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  88.4% (220/249)  IGHV3-74*01  47   ..................................CA.C.....T..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  R  V  A  R  T  D  S  Y  G  S  D  T  F  Y  A  G  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4073   91   TTCGGGTCGCGCGTACTGATAGTTACGGAAGTGACACCTTCTATGCGGGCTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCG  180
V  88.4% (220/249)  IGHV3-74*01  137  .GT.....T.A....T.A.....G.T..G...AG...AAG...C....A...............A........................A  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  T  L  S  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  F  C  A  R  A  P  I  D  V  D  L  
                    Query_4073   181  AGAACACGCTGTCTCTGCAGATGAACAGTCTGAGAGTCGACGACACGGCTGTGTATTTCTGTGCGAGAGCCCCGATAGATGTGGATTTAG  270
V  88.4% (220/249)  IGHV3-74*01  227  ............A......A................C...G................A......A....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD5-12*01  1    --------------------------------------------------------------------------------......A...  10

                                      ---------------->                                
                                      G  N  T  P  D  F  W  G  Q  G  V  L  V  S  V  S  S
                    Query_4073   271  GCAACACGCCTGACTTCTGGGGCCAGGGGGTCCTGGTCTCCGTCTCCTC  319
J  87.2% (34/39)    IGHJ4*02     8    ----------.....A............AAC.......A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_284343

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            294     6e-82
IGHD2-21*02                                                                                           29.5    2e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCTGT	TGCCTCGCT	TATTGTGCTGGTGACTGC	ATCCGCGATAAAACGGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TGCCTCGCTTATTGTGCTGGTGACTGCATCCGCGATAAAACGGCCTACTTTGACTAC	CLAYCAGDCIRDKTAYFDY	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	44	7	0	86.3
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	102	12	0	89.5
Total	N/A	N/A	240	214	26	0	89.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  V  S  V  I  S  S  N  W  W  T  W  V  R  Q  T  P  T  K  G  L 
                    Query_4074   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGTCTCCGTCATCAGCAGTAACTGGTGGACTTGGGTCCGCCAGACCCCAACTAAGGGGCTG  90
V  89.2% (214/240)  IGHV4-4*01   49   ...............................G....A...G...T.............G.............C.....GGG.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_4074   91   GAGTGGATTGGAGACATCTATTATAGGGGGAACACCAACTACAACCCGTCCCTCGAGAGCCGAGTCACCATCTCAGTGGACAAGTCCAAG  180
V  89.2% (214/240)  IGHV4-4*01   139  ...........G..A......C....T....G......................A....T...........A.....A............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       N  H  F  S  L  N  L  N  S  V  T  A  A  D  T  A  I  Y  F  C  C  L  A  Y  C  A  G  D  C  I 
                    Query_4074   181  AACCACTTCTCCCTGAACCTGAACTCTGTCACCGCCGCGGACACGGCAATATATTTCTGTTGCCTCGCTTATTGTGCTGGTGACTGCATC  270
V  89.2% (214/240)  IGHV4-4*01   229  .....G...........G....G......G.................CG.G....G....------------------------------  288
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C                               
D  94.4% (17/18)    IGHD2-21*02  5    ---------------------------------------------------------------------.......G..........---  22

                                      MGT----------------------->                                  
                                       R  D  K  T  A  Y  F  D  Y  W  G  P  G  A  P  V  T  V  S  S  
                    Query_4074   271  CGCGATAAAACGGCCTACTTTGACTACTGGGGCCCGGGAGCCCCGGTCACCGTCTCCTCAG  331
J  93.6% (44/47)    IGHJ4*02     2    --------------....................A....A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_284340

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           310     1e-86
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	10	1	0	90.9
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	46	5	0	90.2
CDR2-IMGT	100	123	24	21	3	0	87.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	232	215	17	0	92.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  N  N  H  A  L  S  W  L  R  Q  A  P  G  K  G  P  E  W  V  S  A  I  
                    Query_4075   14   GTACAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGCTCCGCCAGGCTCCAGGGAAGGGGCCGGAGTGGGTCTCAGCGATTA  103
V  92.7% (215/232)  IGHV3-23*01  65   ..G.....................G..G.T.....A....C...G........................T...............T....  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      T  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  K  N  T  L  Y  L  
                    Query_4075   104  CTGGGAGTGGTAGTAGCACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCAAGAACACGCTGTATCTGC  193
V  92.7% (215/232)  IGHV3-23*01  155  G...T......G..............G......................................A........................  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  Y  S  P  L  D  Y  
                    Query_4075   194  AAATGAACAGCCTTAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTACT  283
V  92.7% (215/232)  IGHV3-23*01  245  .............G....................A..............A..--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------..........---------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------------.........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4075   284  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (42/42)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_284341

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           319     2e-89
IGHD5-12*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	T	TGGTTACGAT	CGATTCCTC	GACAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTTGGTTACGATCGATTCCTCGACAAC	ARVGYDRFLDN	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  N  D  G  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  R 
                    Query_4076   1    ACCCTGTCCCTCACCTGCACTGTCTCGGGTGGCTCCGTCAACGATGGTAATTATTACTGGAGCTGGATCCGACAGCCCCCAGGGAAGAGA  90
V  90.8% (227/250)  IGHV4-61*01  49   ..........................T.............G.AG.....G...C.................G...............G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  F  I  Y  Y  T  G  S  T  T  D  N  P  S  L  K  S  R  V  T  M  S  V  D  T  P 
                    Query_4076   91   CTGGAGTGGATGGGGTTTATCTATTACACTGGGAGCACCACCGACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGCCC  180
V  90.8% (227/250)  IGHV4-61*01  139  ...........T....A...........G...........A.T...............................A.....A......T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  R  L  W  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  V  G  Y  D  R  F  L 
                    Query_4076   181  AAGAACCAGTTCTCCCTGCGGCTATGGTCTGTGACCTCTGCGGACACGGCCGTGTATTACTGTGCCAGAGTTGGTTACGATCGATTCCTC  270
V  90.8% (227/250)  IGHV4-61*01  229  ..................AA...GA.C.........G............................G....--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD5-12*01  11   -----------------------------------------------------------------------...C......---------  20

                                      ----->                                  
                                       D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4076   271  GACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  97.5% (39/40)    IGHJ4*02     9    ...T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_172470

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         307     1e-85
IGHD6-13*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	CTCCCCGACAAC	GCAGCAGCTGG	AAGCAGTCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGCTCCCCGACAACGCAGCAGCTGGAAGCAGTCTTCTTTGCCCAC	ASSPTTQQLEAVFFAH	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	222	26	0	89.5


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  F  S  I  T  T  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4077     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCACCACTGGTGGTTACTACTGGAGTTGGATTCGACAGCCCCCCGGGAAGGGC  90
V  89.5% (222/248)  IGHV4-30-4*01  49   ..................A...........GG........G..G.....A..................C..C........A.........  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  Q  W  L  G  Y  I  F  F  S  G  N  P  Y  Y  N  P  S  F  K  G  R  V  T  I  S  I  D  T  S 
                    Query_4077     91   CTGCAGTGGCTTGGGTACATCTTTTTTAGTGGGAACCCCTACTACAACCCGTCCTTCAAGGGTCGAGTGACCATATCAATAGACACGTCC  180
V  89.5% (222/248)  IGHV4-30-4*01  139  ...G.....A............A..AC.......G.A.................C.....A.......T.........G...........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                         M  N  H  V  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  S  P  T  T  Q  Q  L 
                    Query_4077     181  ATGAACCACGTCTCCCTGAAGCTGGCCTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCCAGCTCCCCGACAACGCAGCAGCTG  270
V  89.5% (222/248)  IGHV4-30-4*01  229  .A......GT..............AG.................................C........----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (11/11)   IGHD6-13*01    8    --------------------------------------------------------------------------------..........  17

                                        GT------------------>                                
                                         E  A  V  F  F  A  H  W  G  Q  G  T  L  V  A  V  S  S
                    Query_4077     271  GAAGCAGTCTTCTTTGCCCACTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  323
D  100.0% (11/11)   IGHD6-13*01    18   .----------------------------------------------------  18
J  92.9% (39/42)    IGHJ4*02       5    -----------.....A.T.......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_241707

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           352     3e-99
IGHD2-2*01                                                                                            18.0    0.60 
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAC	TCACGATTGGAA	TACCAGGTGCTA	AGGGGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGACTCACGATTGGAATACCAGGTGCTAAGGGGGACGGTGTGGACGTC	ARLTIGIPGAKGDGVDV	245	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	24	0	0	100
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	130	30	28	2	0	93.3
FR3-IMGT	131	244	114	111	3	0	97.4
CDR3-IMGT (germline)	245	251	7	6	1	0	85.7
Total	N/A	N/A	237	231	6	0	97.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  E  W  V  G  R  I  
                    Query_4078   15   GTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCGTATTA  104
V  97.5% (231/237)  IGHV3-73*01  65   ..........................................................................................  154
                                         A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  E  W  V  G  R  I  

                                      -------CDR2-IMGT---------><----------------------------------------------------FR3-IMGT---
                                      R  S  K  T  N  N  Y  A  T  A  Y  A  A  S  V  R  G  R  F  T  I  S  R  D  D  S  K  N  T  A  
                    Query_4078   105  GAAGCAAAACTAACAATTACGCGACAGCATATGCTGCGTCGGTGAGAGGCAGGTTCACCATCTCCAGAGATGATTCAAAGAACACGGCGT  194
V  97.5% (231/237)  IGHV3-73*01  155  ........G......G.............................A............................................  244
                                      R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  A  

                                      -------------------------------------------------><--------------------CDR3-IMGT----------
                                      F  L  Q  M  N  S  L  I  T  E  D  T  A  V  Y  Y  C  A  R  L  T  I  G  I  P  G  A  K  G  D  
                    Query_4078   195  TTCTGCAAATGAACAGCCTGATAACCGAGGACACGGCCGTGTATTACTGTGCTAGACTCACGATTGGAATACCAGGTGCTAAGGGGGACG  284
V  97.5% (231/237)  IGHV3-73*01  245  A....................A............................A......---------------------------------  301
                                      Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                                   
D  91.7% (11/12)    IGHD2-2*01   16   ---------------------------------------------------------------------......C.....---------  27
J  95.7% (45/47)    IGHJ6*02     16   ---------------------------------------------------------------------------------------...  18

                                      ---------->                                 
                                      G  V  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_4078   285  GTGTGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  328
J  95.7% (45/47)    IGHJ6*02     19   ..A..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_285439

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	AGTGGC	TACTATGACACTAGTGGT	GACATTCC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGTGGCTACTATGACACTAGTGGTGACATTCCCAACTGGTTCGACCCC	SGYYDTSGDIPNWFDP	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  R  R  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4079   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCCGTCGTAATTACTATTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  94.7% (230/243)  IGHV4-61*01  49   ..........................................A..G...G......C.....C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_4079   91   CTGGAGTGGATTGGATATATCTATTACCGTGGGACCACCAACTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCC  180
V  94.7% (230/243)  IGHV4-61*01  139  ..............G............A......G............C..............................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  T  Y  Y  C  S  G  Y  Y  D  T  S  G  D 
                    Query_4079   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCACTTATTACTGTAGTGGCTACTATGACACTAGTGGTGAC  270
V  94.7% (230/243)  IGHV4-61*01  229  ...................................................GTG.........---------------------------  291
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  88.9% (16/18)    IGHD3-22*01  5    ---------------------------------------------------------------------........T.G.......---  22

                                      GT------------------>                                  
                                       I  P  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4079   271  ATTCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (50/50)   IGHJ5*02     2    -----..................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_285438

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         291     5e-81
IGHD2-8*01                                                                                            21.8    0.041
IGHJ5*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-8*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCC	TCTCGTCGGG	GGATATTGTAC	CCAAGTGAATGGCAGCCGCC	CGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCTCTCGTCGGGGGATATTGTACCCAAGTGAATGGCAGCCGCCCGACTCC	ASRRGILYPSEWQPPDS	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	30	25	2	3	83.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	97	17	0	85.1
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	246	218	25	3	88.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G     S  S  W  S  W  T  R  Q  P  P  G  K  G 
                    Query_4080     1    ACCCTGTCCCTCACCTGCACTGTCTCAGGTGGCTCCATCAGCAGTGGG---TCCTCCTGGAGCTGGACCCGGCAGCCACCAGGGAAGGGC  87
V  88.6% (218/246)  IGHV4-30-2*01  49   ..................G.......T....................TGGT.A..............T......................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  D  S  G  T  T  F  Y  N  P  S  L  M  S  R  V  T  I  L  I  D  K  S 
                    Query_4080     88   CTGGAGTGGATTGGGTACATCTATGATAGTGGAACCACCTTCTACAACCCGTCCCTCATGAGTCGCGTCACCATATTAATTGACAAGTCC  177
V  88.6% (218/246)  IGHV4-30-2*01  139  ........................C.......G.G.....A.................A......A..........C.G.A....G....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         R  N  Q  F  S  L  M  L  T  S  V  T  A  A  D  T  A  F  Y  F  C  A  S  R  R  G  I  L  Y  P 
                    Query_4080     178  AGGAACCAATTCTCCCTGATGTTGACCTCTGTGACCGCCGCGGACACGGCCTTTTACTTTTGTGCCTCTCGTCGGGGGATATTGTACCCA  267
V  88.6% (218/246)  IGHV4-30-2*01  229  .A......G..........A.C...G.........................G.G..T.AC......------------------------  294
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (11/11)   IGHD2-8*01     2    ----------------------------------------------------------------------------...........---  12

                                        MGT-------------------->                                
                                         S  E  W  Q  P  P  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4080     268  AGTGAATGGCAGCCGCCCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  323
J  97.4% (38/39)    IGHJ5*01       11   -----------------...............A.......................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_35683

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           364     5e-103
IGHD2-15*01                                                                                           35.3    4e-06 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GGGGC	TATTGTAGTGGTGGTATGTGCTAC	ACCCCCGT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGGGGCTATTGTAGTGGTGGTATGTGCTACACCCCCGTCTACTACTACTCCGGTATGGACGTC	AKGGYCSGGMCYTPVYYYSGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  P  
                    Query_4081   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCTTCAGTACCTACTGGATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  96.8% (241/249)  IGHV3-74*01  47   ...................................A.........G........................A................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4081   91   TGTGGGTCTCACGTATCAATAGTGATGGGAGTAGCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (241/249)  IGHV3-74*01  137  ................T......................G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  G  Y  C  S  G  G  
                    Query_4081   181  AGAACACCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAAAGGGGGCTATTGTAGTGGTGGTA  270
V  96.8% (241/249)  IGHV3-74*01  227  .......G..........................................................G..---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (22/24)    IGHD2-15*01  5    --------------------------------------------------------------------------................  20

                                      --CDR3-IMGT----------------------------->                                 
                                      M  C  Y  T  P  V  Y  Y  Y  S  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_4081   271  TGTGCTACACCCCCGTCTACTACTACTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  344
D  91.7% (22/24)    IGHD2-15*01  21   GC......------------------------------------------------------------------  28
J  96.6% (56/58)    IGHJ6*02     5    ----------------...........A...................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_172472

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD6-13*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TACAATCGCGGCCGACCA	AGCTGGTA	AT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATACAATCGCGGCCGACCAAGCTGGTAATTACTACTACGCCATGGACGTC	AKDTIAADQAGNYYYAMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  Q  G  L  
                    Query_4082   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAATTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGCAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   .............................................GC.................................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  T  G  S  G  G  S  R  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4082   91   AGTGGGTCTCAGGCATTACTGGTAGCGGTGGTAGTAGGTACTACGCAGACTCCGTGAAGGGTCGGTTCACCATCTCCAGAGACAACTCCA  180
V  92.8% (232/250)  IGHV3-23*01  137  ............CT....G......T........C.CA.......................C.......................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  M  L  Y  L  Q  I  D  R  L  R  A  E  D  T  A  V  Y  H  C  A  K  D  T  I  A  A  D  Q  
                    Query_4082   181  AGAATATGCTGTATCTGCAAATTGACAGACTGAGAGCCGAGGACACGGCCGTATATCACTGTGCGAAAGATACAATCGCGGCCGACCAAG  270
V  92.8% (232/250)  IGHV3-23*01  227  ....C.C...............GA....C...........................T.............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD6-13*01  13   ----------------------------------------------------------------------------------------..  14

                                      -IMGT----------------------->                                 
                                      A  G  N  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  T  A  S  S 
                    Query_4082   271  CTGGTAATTACTACTACGCCATGGACGTCTGGGGCCAGGGGACCACGGTCACCGCCTCCTCA  332
D  100.0% (8/8)     IGHD6-13*01  15   ......--------------------------------------------------------  20
J  92.6% (50/54)    IGHJ6*02     9    --------..........GT.................A................T.......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_285430

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           282     4e-78
IGHD3-16*01                                                                                           18.0    0.60 
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACAACG	TATGCTTAT	GTCAGTGCTTGGGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAACGTATGCTTATGTCAGTGCTTGGGGATGATGCTTTTGATGTC	ARRQRMLMSVLGDDAFDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  V  T  T  T  R  Y  S  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_4083   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCGTCACCACTACTAGATACTCCTGGGGTTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  86.0% (215/250)  IGHV4-39*01  49   ...............................G....A...G..G..G...T....A......C..........................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Q  M  F  Y  G  G  S  T  Y  Q  N  P  S  L  N  S  R  V  T  V  S  V  D  P  S 
                    Query_4083   91   CTGGAATGGATTGGGCAGATGTTCTATGGTGGGAGCACGTACCAGAACCCGTCGCTGAATAGTCGAGTCACCGTGTCCGTTGACCCGTCC  180
V  86.0% (215/250)  IGHV4-39*01  139  .....G.........AGT..C.AT...A..........C...T.C........C..C..G............A.A.....A...A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  S  Q  F  F  L  N  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  R  Q  R  M  L  M  S 
                    Query_4083   181  AAGAGTCAGTTCTTCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCTGTATATTATTGTGCGAGACGACAACGTATGCTTATGTCA  270
V  86.0% (215/250)  IGHV4-39*01  229  ....AC.......C......G....G...................A.......G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  26   -----------------------------------------------------------------------------.........----  34

                                      -IMGT--------------------->                                  
                                       V  L  G  D  D  A  F  D  V  W  G  Q  G  T  G  V  T  V  S  S  
                    Query_4083   271  GTGCTTGGGGATGATGCTTTTGATGTCTGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  331
J  96.0% (48/50)    IGHJ3*01     1    -----------...............................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_15703

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           302     3e-84
IGHD5-12*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATTACATCGAGA	TGGCTAC	AATAGAGGAGTT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATTACATCGAGATGGCTACAATAGAGGAGTTTTTGCCTTC	ARELHRDGYNRGVFAF	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	220	27	0	89.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  L  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_4084   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGTTTAACATTTAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.1% (220/247)  IGHV3-53*01  47   .....................C.........G..C..CG.C...AG.A..............G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  I  H  S  G  G  T  T  S  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  K  S  T  
                    Query_4084   91   AGTGGGTCTCACTTATTCATAGTGGTGGGACCACGTCCTATTCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAAGTCCACTA  180
V  89.1% (220/247)  IGHV3-53*01  137  ...........G.....T....C.....T.G...A.A...CG........................................T....AG.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  V  Y  L  Q  M  V  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  L  H  R  D  G  Y  N  
                    Query_4084   181  ACACGGTATATCTTCAAATGGTCAACCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGAATTACATCGAGATGGCTACAATA  270
V  89.1% (220/247)  IGHV3-53*01  227  .....C.G............AA..G..........................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD5-12*01  11   -------------------------------------------------------------------------------.......----  17

                                      ---------------->                                  
                                      R  G  V  F  A  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_4084   271  GAGGAGTTTTTGCCTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  321
J  93.0% (40/43)    IGHJ4*02     6    --------....A..A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_15701

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            319     2e-89
IGHD6-13*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTAGTAACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTAGTAACACCTGGTACTCGGGGTTTTGATTCC	AGHLVTPGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	225	21	0	91.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4085   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  91.5% (225/246)  IGHV4-4*01   49   ........................................G..GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  A  E  I  H  H  G  G  P  T  N  Y  N  P  A  L  E  S  R  V  T  I  S  V  D  K  S  N 
                    Query_4085   91   GAGTGGATAGCGGAAATCCATCATGGTGGACCCACCAACTACAACCCGGCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAC  180
V  91.5% (225/246)  IGHV4-4*01   139  ........T.G.......T.....A....GAG................T.....A..................................G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  S  L  S  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_4085   181  AACCAATTCTCCCTGAGCCTGAGCTCTCTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATCTAGTAACACCTGGTACTCGG  270
V  91.5% (225/246)  IGHV4-4*01   229  .....G..........AG.........G...........................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4085   271  GGTTTTGATTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.3% (41/43)    IGHJ4*02     6    ---.....C.A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_15700

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           336     1e-94
IGHD1-26*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TGGAGGGAGAG	GTGGGAGCTAC	CTGGGGGTTTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTGGAGGGAGAGGTGGGAGCTACCTGGGGGTTTCTTGACTAC	AKVEGEVGATWGFLDY	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	21	3	6	70
FR3-IMGT	135	248	114	110	4	0	96.5
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	237	12	6	92.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  G  W  V  R  Q  A  P  E  K  G  L  
                    Query_4086   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTACGCCATGGGCTGGGTCCGCCAGGCTCCAGAGAAGGGGCTGG  90
V  92.9% (237/255)  IGHV3-23*01  47   .............................................G...T......A.....................G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  S  G  I  N  G  S  D  H  G  G  G  S  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  
                    Query_4086   91   AGTGGGTCTCAGGTATTAATGGTAGTGATCATGGTGGTGGCTCATACTATGCAGAGTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACA  180
V  92.9% (237/255)  IGHV3-23*01  137  ............C.....G........------.....A..A.......C.....C..................................  220
                                      E  W  V  S  A  I  S  G  S        G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      N  S  K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  V  E  G  E  V  
                    Query_4086   181  ATTCCAAGAACACGCTGTATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCCTATATTACTGTGCGAAAGTGGAGGGAGAGGTGG  270
V  92.9% (237/255)  IGHV3-23*01  221  .............................A..........................G..................---------------  295
                                      N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                 
D  100.0% (11/11)   IGHD1-26*01  7    --------------------------------------------------------------------------------------....  10

                                      R3-IMGT------------------>                                  
                                      G  A  T  W  G  F  L  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4086   271  GAGCTACCTGGGGGTTTCTTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (11/11)   IGHD1-26*01  11   .......-----------------------------------------------------  17
J  97.6% (41/42)    IGHJ4*02     7    ------------------...............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_15707

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           347     7e-98
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TC	CGGTGACTAC	GGAAACAGTTTGCCGTC	TGACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCGGTGACTACGGAAACAGTTTGCCGTCTGACAAC	ARSGDYGNSLPSDN	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  R  A  P  G  K  G  L  
                    Query_4087   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCAGGATTCACCTTCAGTAGCTACGGCATGCACTGGGTCCGCCGGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-33*01  47   ............................T....................T...................A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  Q  D  S  V  R  G  R  F  I  I  S  R  D  N  S  
                    Query_4087   91   AGTGGGTGGCAGTTATTTGGTATGATGGAAGTAATAAATACTACCAAGACTCCGTGAGGGGTCGATTCATCATCTCCAGAGACAATTCCA  180
V  94.8% (235/248)  IGHV3-33*01  137  ................A..........................TGC...........A...C.......C....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  G  D  Y  G  N  S  
                    Query_4087   181  GGAACACACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGATCCGGTGACTACGGAAACAGTT  270
V  94.8% (235/248)  IGHV3-33*01  227  A......G....A.......................................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD4-17*01  7    ----------------------------------------------------------------------..........----------  16

                                      ------------->                                 
                                      L  P  S  D  N  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_4087   271  TGCCGTCTGACAACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCA  317
J  95.0% (38/40)    IGHJ4*02     8    -------....T.............A.....................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_15705

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           391     6e-111
IGHD6-6*01                                                                                            21.8    0.044 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCC	ATAGCAGCTCG	GATGGGGA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCATAGCAGCTCGGATGGGGAACTTTGACTCC	AAIAARMGNFDS	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	268	18	0	93.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  V  S  R  Y
                    Query_4088   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCCGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCGTCAGTAGGTA  90
V  93.7% (268/286)  IGHV1-69*01  6    ....................................T..........................................T....C..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        L  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  L  L  R  T  A  N  Y  A  Q
                    Query_4088   91   TCTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGATCATCCCTCTTTTAAGGACAGCAAACTACGCACA  180
V  93.7% (268/286)  IGHV1-69*01  96   .GC.................................G...........................A.C..TG.T.................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  H  E  S  T  S  T  V  Y  M  E  V  N  S  L  G  S  Q  D  T  A
                    Query_4088   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGCACGAATCCACGAGCACAGTCTACATGGAGGTGAACAGCCTGGGATCTCAGGACACGGC  270
V  93.7% (268/286)  IGHV1-69*01  186  ...............................G..................C..........C...G.......A.....G..........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  A  A  I  A  A  R  M  G  N  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4088   271  CGTGTATTACTGTGCGGCCATAGCAGCTCGGATGGGGAACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  351
V  93.7% (268/286)  IGHV1-69*01  276  ................-----------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                  
D  100.0% (11/11)   IGHD6-6*01   5    -------------------...........---------------------------------------------------  15
J  97.7% (42/43)    IGHJ4*02     4    --------------------------------------.........A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_15704

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           366     2e-103
IGHD6-19*01                                                                                           12.2    34    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	GCTCCAG	GGCTGG	GATT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCCAGGGCTGGGATTCTTTGACTAT	AAPGLGFFDY	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	260	26	0	90.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  T  I  N  T  Y
                    Query_4089   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCTTGCAAGGCATCTGGAGACACCATCAACACCTA  90
V  90.9% (260/286)  IGHV1-69*06  6    ..................G......................................C........T.......G....T...G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        T  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  S  F  G  T  A  D  Y  A  P
                    Query_4089   91   TACTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTTCCTTCGGTACAGCAGACTACGCACC  180
V  90.9% (260/286)  IGHV1-69*06  96   .G......G.......................................................AT...T.........A.........A  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  V  T  S  T  R  T  V  Y  M  E  L  S  N  L  R  S  E  D  T  A
                    Query_4089   181  GAAGTTCCAGGGCAGAGTCACCATGACTAGGGTCACGTCCACGAGAACAGTCTACATGGAGCTGAGCAACCTGAGATCTGAGGACACGGC  270
V  90.9% (260/286)  IGHV1-69*06  186  .....................G..T..CGC..A..AA........C....C.................G.....................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        V  Y  Y  C  A  A  P  G  L  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_4089   271  CGTGTATTACTGCGCGGCTCCAGGGCTGGGATTCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  347
V  90.9% (260/286)  IGHV1-69*06  276  ............T...-------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                              
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------......------------------------------------------------  18
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------.........C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_15708

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           269     2e-74
IGHD2-2*01                                                                                            12.2    30   
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GGGCCAGAGA	AGTAGGACC	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGAGGGCCAGAGAAGTAGGACCCTTGACTAC	ATEGQRSRTLDY	234	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	19	5	0	79.2
FR2-IMGT	48	98	51	46	5	0	90.2
CDR2-IMGT	99	119	21	17	4	0	81
FR3-IMGT	120	233	114	100	14	0	87.7
CDR3-IMGT (germline)	234	241	8	7	1	0	87.5
Total	N/A	N/A	230	201	29	0	87.4


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  N  N  Y  M  S  W  A  R  Q  A  P  G  M  G  L  E  W  V  S  L  I 
                    Query_4090   12   TGTGCAGCCTCTGGATTCACCTTCAGTAATAACTATATGAGTTGGGCCCGCCAGGCTCCAGGGATGGGGCTGGAGTGGGTCTCTCTTATT  101
V  87.4% (201/230)  IGHV3-53*01  64   ..............G......G......GC.....C.....C....T.................A..................AG.....  153
                                       C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I 

                                      ---CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-----------
                                       Y  S  G  G  G  S  F  Y  T  H  S  V  E  G  R  F  T  I  S  R  D  D  Y  K  N  T  V  Y  L  Q 
                    Query_4090   102  TACAGCGGTGGTGGCTCCTTCTACACACACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACGATTACAAGAACACGGTTTATCTTCAA  191
V  87.4% (201/230)  IGHV3-53*01  154  ..T.........A..A.A.A....G..G........A..........................A...C..........C.G.........  243
                                       Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 

                                      -----------------------------------------><-------------CDR3-IMGT------------>            
                                       M  N  N  V  R  A  E  D  T  A  I  Y  Y  C  A  T  E  G  Q  R  S  R  T  L  D  Y  W  G  Q  G 
                    Query_4090   192  ATGAACAATGTTAGAGCCGAGGACACGGCCATATATTACTGTGCGACAGAGGGCCAGAGAAGTAGGACCCTTGACTACTGGGGCCAGGGA  281
V  87.4% (201/230)  IGHV3-53*01  244  .......GCC.G..................G.G.............G...----------------------------------------  293
                                       M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                           
D  88.9% (8/9)      IGHD2-2*01   11   ------------------------------------------------------------.....T...---------------------  19
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------....................  26

                                                            
                                       T  L  V  I  V  S  S  
                    Query_4090   282  ACCCTGGTCATCGTCTCCTCAG  303
J  97.6% (41/42)    IGHJ4*02     27   ..........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_106761

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            420     7e-120
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	274	5	0	98.2


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_4091  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  98.2% (274/279)  IGHV6-1*01  26   ...........................................................G......G....AG.................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_4091  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.2% (274/279)  IGHV6-1*01  116  ..........................................................................................  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_4091  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.2% (274/279)  IGHV6-1*01  206  ..............A...........................................................................  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------CDR3-IMGT--------->                                  
                                     C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4091  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  98.2% (274/279)  IGHV6-1*01  296  .........---------------------------------------------------------  304
                                     C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02    4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_23677

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           388     5e-110
IGHD3-3*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	GGAGAGTCTG	CGATTTCTGGAGTGGTTAT	CCCCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTAC	AREESLRFLEWLSPDY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  L  T  R  Y 
                    Query_4092   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTAAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTGACCAGATAT  91
V  92.8% (269/290)  IGHV1-18*01  7    ...............................................G.................T..............T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  M  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  S  N  I  N  Y  A  Q 
                    Query_4092   92   AGTATGTCTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATAGCAACATAAATTATGCACAG  181
V  92.8% (269/290)  IGHV1-18*01  97   G....CAGC....................................................C.......G.T....C...C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  L  G  R  V  T  M  T  I  D  T  S  A  N  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_4092   182  AAACTCCTGGGCAGAGTCACCATGACCATAGACACATCCGCGAACACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.8% (269/290)  IGHV1-18*01  187  ..G....A....................C..........A...G..............................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                             
                                       V  Y  Y  C  A  R  E  E  S  L  R  F  L  E  W  L  S  P  D  Y  W  G  Q  G  T  L  V  I  V  S
                    Query_4092   272  GTGTATTATTGTGCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTC  360
V  92.8% (269/290)  IGHV1-18*01  277  ........C........A..---------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-3*01   7    ------------------------------......T............----------------------------------------  25
J  97.1% (34/35)    IGHJ4*02     9    ------------------------------------------------------............................C......  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_265160

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           307     1e-85
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACAGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACAGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	219	23	0	90.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_4093   4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAGT  93
V  90.5% (219/242)  IGHV4-34*01  50   .....TCC...A...................G...T..................G...........................G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  R  T  T  Y  N  P  S  F  Q  S  R  V  S  L  S  L  D  M  S  K  K  
                    Query_4093   94   GGATTGGGGAAATCAATCATAGTGGAAGAACCACCTACAACCCGTCCTTCCAGAGTCGCGTCTCCTTATCATTAGACATGTCCAAGAAGC  183
V  90.5% (219/242)  IGHV4-34*01  140  ............................C....A.............C..A.......A...A..A.....G......C.........C.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  V  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y  
                    Query_4093   184  AGTTCTCCGTGAAGGTGACGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAACAGTAAAGGGGGTTATTACTGTCTACC  273
V  90.5% (219/242)  IGHV4-34*01  230  ........C.....C...GC..........................G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD3-22*01  20   -------------------------------------------------------------------------..........-------  29

                                      ------------------->                                 
                                      Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4093   274  AGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (40/40)   IGHJ6*02     23   -------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_172477

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD6-13*01                                                                                           18.0    0.55  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CACG	AGCAGCTGG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACACGAGCAGCTGGATTGACTAC	ARDTSSWIDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4094   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ...............................G...........G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  T  G  S  T  N  Y  N  P  S  L  K  S  Q  F  T  I  S  V  D  T  S  K  N 
                    Query_4094   91   TGGATTGGGTATATCTTTTACACTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCAATTCACCATATCAGTAGACACGTCGAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  ................A.....G...................................G.G......................C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  S  S  W  I  D  Y  W 
                    Query_4094   181  CAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACACGAGCAGCTGGATTGACTACTGG  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-13*01  10   ---------------------------------------------------------------------.........------------  18
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------...........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_4094   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (42/42)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_64598

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           372     2e-105
IGHD3-22*01                                                                                           31.5    5e-05 
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAG	TTACTTTGATAGTAGTGTTTAT	GCTCAGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTACTTTGATAGTAGTGTTTATGCTCAGGACGGTATGGACGTC	ARESYFDSSVYAQDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4095   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.6% (244/250)  IGHV3-21*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  S  I  S  S  S  S  N  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4095   91   ACTGGGTCTCATCCATTAGTAGTAGTAGTAATTACATATACTACGCGGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (244/250)  IGHV3-21*01  137  .G............................G...............A...........................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  D  R  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  S  Y  F  D  S  S  
                    Query_4095   181  AGAACTCACTGTATCTGCAAATGGACAGGCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAAAGTTACTTTGATAGTAGTG  270
V  97.6% (244/250)  IGHV3-21*01  227  .......................A....C.........................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (20/22)    IGHD3-22*01  4    -------------------------------------------------------------------------.....A...........  20

                                      IMGT--------------------->                                 
                                      V  Y  A  Q  D  G  M  D  V  W  G  Q  W  T  T  V  P  V  S  S 
                    Query_4095   271  TTTATGCTCAGGACGGTATGGACGTCTGGGGCCAATGGACCACGGTCCCCGTCTCCTCA  329
D  90.9% (20/22)    IGHD3-22*01  21   G....------------------------------------------------------  25
J  95.7% (45/47)    IGHJ6*02     16   ------------.......................G...........A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_172478

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           254     1e-69
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATAGCTATA	ATGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATAGCTATAATGTC	ARGLLIEDPNYVWGSFRRNHNSYNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	94	20	0	82.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	203	41	0	83.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  *  H  W  L  R  Q  P  P  G  R  G  L  E 
                    Query_4096   1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTAGCACTGGTTGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  83.2% (203/244)  IGHV4-59*01  49   ..................A....C.......G.......A...G........G.AG....A.C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_4096   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  83.2% (203/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  N  Y 
                    Query_4096   181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCAACTAT  270
V  83.2% (203/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GT.....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  N  S  Y  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_4096   271  GTTTGGGGGAGTTTTCGCCGCAATCACAATAGCTATAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  94.9% (37/39)    IGHJ3*01     12   -------------------------------------....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_95436

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         357     1e-100
IGHD2-2*02                                                                                            37.2    1e-06 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	TCACCTCGGC	TGTAGTAGTACCAGCTTCTATA	GC	CTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTCACCTCGGCTGTAGTAGTACCAGCTTCTATAGCCTTTAACTCC	ARVTSAVVVPASIAFNS	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  A  I  S  S  G  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_4097     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCGCCATCAGCAGTGGTGGTTACTACTGGGGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  95.6% (239/250)  IGHV4-30-4*01  49   ..................A..............T...............A..........A.............................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  H  I  Y  Y  N  G  R  T  Y  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_4097     91   CTGGAGTGGATTGGGCACATCTATTACAATGGGAGGACCTACTACAACCCGTCCCTCAAGAGTCGAGTTTCCATATCAGTAGACACGTCC  180
V  95.6% (239/250)  IGHV4-30-4*01  139  ...............T............G......C.................................A....................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  K  L  S  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  V  T  S  A  V  V  V 
                    Query_4097     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGGCTGCCGCTGACACGGCCGTCTATTACTGTGCCAGAGTCACCTCGGCTGTAGTAGTA  270
V  95.6% (239/250)  IGHV4-30-4*01  229  .................................A.......A...........G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.5% (21/22)    IGHD2-2*02     8    --------------------------------------------------------------------------------..........  17

                                        MGT-------------------->                                  
                                         P  A  S  I  A  F  N  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4097     271  CCAGCTTCTATAGCCTTTAACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.5% (21/22)    IGHD2-2*02     18   ......G.....----------------------------------------------  29
J  95.5% (42/44)    IGHJ4*02       5    --------------....G...A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_183745

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           382     4e-108
IGHD6-25*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTC	GGGTTTACCAGCGGCT	TGGACGGCTTTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTCGGGTTTACCAGCGGCTTGGACGGCTTTGACTACTACTACGCTATGGACGTC	ARDVGFTSGLDGFDYYYAMDV	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	267	23	0	92.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  D  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  N  S 
                    Query_4098   2    CAGCTGGTGCAGTCTGGAGGTGACGTGAAGAAGCCGGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTTAGCAACTCT  91
V  92.1% (267/290)  IGHV1-18*01  7    ...................C...G...........T.............................T................C..G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  V  P  G  Q  G  L  E  W  M  G  W  I  S  T  Y  N  G  N  T  N  Y  A  Q 
                    Query_4098   92   GGCATCAACTGGGTGCGACAGGTCCCTGGACAAGGGCTAGAGTGGATGGGCTGGATCAGCACTTACAATGGAAACACAAATTATGCACAG  181
V  92.1% (267/290)  IGHV1-18*01  97   ..T....G..............C...............T...........A.........G..........T........C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  L  T  M  A  M  D  T  S  T  S  T  V  Y  M  E  L  T  S  L  R  S  D  D  S  A 
                    Query_4098   182  AACCTCCAGGGCAGACTCACCATGGCCATGGACACATCCACGAGCACAGTCTACATGGAGCTGACGAGCCTGAGATCTGACGACTCGGCC  271
V  92.1% (267/290)  IGHV1-18*01  187  ..G............G........A...CA...................C..............G...................A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------------CDR3-IMGT-------------------------->               
                                       V  Y  Y  C  A  R  D  V  G  F  T  S  G  L  D  G  F  D  Y  Y  Y  A  M  D  V  W  G  Q  G  T 
                    Query_4098   272  GTGTATTACTGTGCGAGAGATGTCGGGTTTACCAGCGGCTTGGACGGCTTTGACTACTACTACGCTATGGACGTCTGGGGCCAAGGGACC  361
V  92.1% (267/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  87.5% (14/16)    IGHD6-25*01  1    ------------------------....A..G........--------------------------------------------------  16
J  96.4% (54/56)    IGHJ6*02     7    ----------------------------------------------------............G.........................  44

                                                        
                                       P  V  T  V  S  S 
                    Query_4098   362  CCGGTCACCGTCTCCTCA  379
J  96.4% (54/56)    IGHJ6*02     45   A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_138483

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           391     6e-111
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGGAAATAGGGGTGACC	TCGGGGAG	AGGGTATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGGAAATAGGGGTGACCTCGGGGAGAGGGTATCTTGACTAC	ARAGEIGVTSGRGYLDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  N  Y
                    Query_4099   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAACTA  90
V  93.1% (270/290)  IGHV1-69*06  6    ..................G...................................................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  T  W  V  R  L  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  M  F  G  T  T  N  Y  A  Q
                    Query_4099   91   TGTTATCACTTGGGTTAGACTGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATGTTTGGAACAACAAACTACGCACA  180
V  93.1% (270/290)  IGHV1-69*06  96   ..C.....GC.....GC...A.............................................C.....T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  L  T  I  S  A  D  T  S  T  S  T  T  Y  M  E  L  S  S  L  R  S  D  D  T  G
                    Query_4099   181  GAAATTCCAGGGCAGACTCACGATTAGCGCGGACACATCCACGAGCACAACCTATATGGAGCTGAGCAGCCTGAGATCTGACGACACGGG  270
V  93.1% (270/290)  IGHV1-69*06  186  ...G............G.........C........A.............G....C..........................G.......C  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  A  G  E  I  G  V  T  S  G  R  G  Y  L  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_4099   271  CGTCTATTACTGTGCGAGAGCGGGGGAAATAGGGGTGACCTCGGGGAGAGGGTATCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  93.1% (270/290)  IGHV1-69*06  276  ...G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-10*01  14   ----------------------------------------........------------------------------------------  21
J  100.0% (42/42)   IGHJ4*02     7    --------------------------------------------------------..................................  40

                                              
                                        S  S  
                    Query_4099   361  CTCCTCAG  368
J  100.0% (42/42)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_138481

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           305     3e-85
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTGG	AGCAGTGGCTGGT	CGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTGGAGCAGTGGCTGGTCGGTTTGACTTC	AREGGAVAGRFDF	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	223	28	0	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  R  G  S  V  S  S  G  G  Y  H  W  S  W  I  R  Q  T  P  G  R  G 
                    Query_4100   1    ACCCTGTCCCTCACCTGCTCTGTCTCTCGTGGCTCCGTCAGCAGTGGGGGTTATCACTGGTCCTGGATCCGGCAGACCCCAGGCAGGGGA  90
V  88.8% (223/251)  IGHV4-61*08  49   ..................A........G...................T.....CT.....AG.............C.......G.A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  F  T  G  T  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  A  D  M  S 
                    Query_4100   91   CTGGAGTGGATTGGCTATATCCACTTCACTGGGACCACCAAGTACAACCCCTCCCTTAAGAGTCGAGTCAGCATATCAGCAGACATGTCC  180
V  88.8% (223/251)  IGHV4-61*08  139  ..............G......T.T.A..G.....G......C..............C.............C........T.....C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  E  G  G  A  V  A  G 
                    Query_4100   181  AAGAACCAATTCTCCCTGAACCTGAGGTCTGTGACCGCTGCGGACACGGCCATCTACTATTGTGCGAGAGAGGGTGGAGCAGTGGCTGGT  270
V  88.8% (223/251)  IGHV4-61*08  229  ........G...........G.....C........................G.G..T..C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD6-19*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------->                                  
                                       R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4100   271  CGGTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02     6    ---.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_138487

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           346     2e-97
IGHD3-9*01                                                                                            29.5    2e-04
IGHJ5*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATCCAC	GTATAACGATGTTTTGACTGG	CCAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATCCACGTATAACGATGTTTTGACTGGCCATAACTGGTTCGACCCC	ARGSTYNDVLTGHNWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  L  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4101   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCATTCTCAGTAGTTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-48*03  47   ....................G...............CCT...................C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  V  R  G  T  T  I  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  H  A  
                    Query_4101   91   AGTGGGTTTCATACATTAGTGTTAGAGGTACTACCATATACTACGCAGACTCTGTGCAGGGCCGATTTACCATCTCTAGAGACCACGCCA  180
V  94.4% (235/249)  IGHV3-48*03  137  ....................AG...T....G.........................A..........C........C......A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      T  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  S  T  Y  N  D  V  
                    Query_4101   181  CGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGATCCACGTATAACGATGTTT  270
V  94.4% (235/249)  IGHV3-48*03  227  A....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD3-9*01   1    ----------------------------------------------------------------------------....T.....A...  14

                                      IMGT--------------------->                                  
                                      L  T  G  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4101   271  TGACTGGCCATAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  90.5% (19/21)    IGHD3-9*01   15   .......-----------------------------------------------------  21
J  100.0% (49/49)   IGHJ5*02     3    -----------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_138486

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           403     1e-114
IGHD4-17*01                                                                                           18.0    0.68  
IGHJ6*01                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAG	CTACGGTGA	GTCCGAGTACTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTC	ARDLATVSPSTFYYGMDV	289	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	75	69	67	2	0	97.1
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  T  S  Y 
                    Query_4102   7    CAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCTTCTGGTTACACCTTTACCAGTTAC  96
V  94.5% (274/290)  IGHV1-18*04  7    ....................T..........................................G......................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_4102   97   GGTATCACTTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  186
V  94.5% (274/290)  IGHV1-18*04  97   .......GC........A..............A................................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  S  D  D  T  A 
                    Query_4102   187  ATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGATCTGACGACACGGCC  276
V  94.5% (274/290)  IGHV1-18*04  187  .A.C...A..G.................C....................C..........C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  T  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_4102   277  GTGTATTACTGTGCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTCTGGGGTCAAGGGACCACGGTCACC  366
V  94.5% (274/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------.........--------------------------------------------------------  12
J  98.1% (52/53)    IGHJ6*01     11   -----------------------------------------------........................G..................  53

                                                
                                       V  S  S  
                    Query_4102   367  GTCTCCTCAG  376
J  98.1% (52/53)    IGHJ6*01     54   ..........  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_138484

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           322     2e-90
IGHD3-3*01                                                                                            27.6    7e-04
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	TTGGAGTGGTTATT	TATA	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATTGGAGTGGTTATTTATAGACTTC	ARELEWLFIDF	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  N  G  S  Y  Y  W  T  W  I  R  Q  A  P  G  K  G  
                    Query_4103   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCGTCAGCAATGGGAGTTACTACTGGACCTGGATCCGGCAGGCCCCAGGGAAGGGAC  93
V  91.2% (228/250)  IGHV4-61*01  50   .....TCC...A....C.........................G...T.............G.............C...............  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  C  I  F  T  S  G  T  T  N  Y  H  P  S  L  K  S  R  V  T  I  S  I  D  T  S  
                    Query_4103   94   TGGAGTGGATTGGGTGTATCTTTACTAGTGGGACCACCAACTACCATCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCA  183
V  91.2% (228/250)  IGHV4-61*01  140  ...............A.....A.TAC.......G..........A.C..............................G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  L  E  W  L  F  I  
                    Query_4103   184  AGAATCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTATTGTGCGAGAGAATTGGAGTGGTTATTTATAG  273
V  91.2% (228/250)  IGHV4-61*01  230  ....C...............C...............................G.....C...........--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD3-3*01   13   -----------------------------------------------------------------------..............-----  26
J  95.0% (38/40)    IGHJ4*02     9    -----------------------------------------------------------------------------------------.  9

                                      ---->                                  
                                      D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_4103   274  ACTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  312
J  95.0% (38/40)    IGHJ4*02     10   ...A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_195356

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           377     8e-107
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	242	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4104   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.6% (242/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_4104   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  99.6% (242/243)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_4104   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  99.6% (242/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4104   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_195357

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*02                                                                                            322     2e-90
IGHD2-15*01                                                                                           23.8    0.012
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGGGACTGTGCTATG	GGTGGTAGTTGCTAC	CTCGGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGGGACTGTGCTATGGGTGGTAGTTGCTACCTCGGGGACTAC	ARRDCAMGGSCYLGDY	266	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	154	24	7	2	15	29.2
FR3-IMGT	155	265	114	102	9	3	89.5
CDR3-IMGT (germline)	266	271	6	6	0	0	100
Total	N/A	N/A	288	249	21	18	86.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y 
                    Query_4105   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAAAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTACATAT  91
V  86.5% (249/288)  IGHV1-3*02   7    .................G...........G.......................................................GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       P  I  H  W  V  R  Q  A  P  G  Q  R  L  E  W  L  E  W  I  N  G                    Y  S  Q 
                    Query_4105   92   CCTATACATTGGGTGCGCCAGGCCCCCGGACAGAGGCTTGAGTGGCTGGAGTGGATCAACGGT------------------TATTCACAG  163
V  86.5% (249/288)  IGHV1-3*02   97   G....G..........................A............A...GA....G.....C.GGCAATGGTAACACAAAA.........  186
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  S  N  A  G  N  G  N  T  K  Y  S  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       E  F  Q  G  R  V  I  I  S  S  D  T  S  A  T  T  S  Y  M  E  L  S  S  L  R  S  E  D  T  A 
                    Query_4105   164  GAGTTCCAGGGCAGAGTCATCATTTCCAGTGACACATCCGCGACCACTTCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCT  253
V  86.5% (249/288)  IGHV1-3*02   187  ...................C....A....G.............G...AG....................................T....  276
                                       E  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  M  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  R  D  C  A  M  G  G  S  C  Y  L  G  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_4105   254  GTATATTATTGTGCGAGAAGGGACTGTGCTATGGGTGGTAGTTGCTACCTCGGGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  343
V  86.5% (249/288)  IGHV1-3*02   277  ..G.....C.........------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  93.3% (14/15)    IGHD2-15*01  14   ---------------------------------........C......------------------------------------------  28
J  100.0% (39/39)   IGHJ4*02     9    ------------------------------------------------------....................................  44

                                         
                                       S 
                    Query_4105   344  TCA  346
J  100.0% (39/39)   IGHJ4*02     45   ...  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_195354

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD4-17*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGTATCT	TACGGTGAC	CCCACAAGTTACTCACGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGGGTATCTTACGGTGACCCCACAAGTTACTCACGGTTTTGACTTC	VKGYLTVTPQVTHGFDF	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	123	24	19	5	0	79.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	232	218	14	0	94


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  S  V  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 
                    Query_4106   13   TGTGCAGCCTCTGGATTCAGCGTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCTATT  102
V  94.0% (218/232)  IGHV3-23*01  64   ...................C.T......G.......................................................G.....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  I  S  G  A  Y  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  S  S  K  N  T  L  Y  L 
                    Query_4106   103  AGTATTAGTGGTGCTTACACATACTACGTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAGTTCCAAGAACACGCTGTATCTG  192
V  94.0% (218/232)  IGHV3-23*01  154  ...GG........G.AG...........C......................................A......................  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------------CDR3-IMGT---------------
                                       Q  M  S  S  L  R  A  E  D  T  A  I  Y  Y  C  V  K  G  Y  L  T  V  T  P  Q  V  T  H  G  F 
                    Query_4106   193  CAAATGAGCAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGTGAAAGGGTATCTTACGGTGACCCCACAAGTTACTCACGGTTTT  282
V  94.0% (218/232)  IGHV3-23*01  244  .......A.........................G............C.....--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (9/9)     IGHD4-17*01  5    -----------------------------------------------------------.........----------------------  13
J  93.0% (40/43)    IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  F  W  G  L  G  T  L  A  T  V  S  S  
                    Query_4106   283  GACTTCTGGGGCCTGGGAACCCTGGCCACCGTCTCCTCAG  322
J  93.0% (40/43)    IGHJ4*02     9    ....A........A...........T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_195355

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           322     2e-90
IGHD5-12*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ4*02	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGGAGA	AGTGGCTAC	AAGACTCAGGGGGGCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGAGAAGTGGCTACAAGACTCAGGGGGGCCCTTTTGACTAC	ARREKWLQDSGGPF*L	244	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  L  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_4107   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCCTCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCCGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-39*01  49   ...............................G....A...........................................A........G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  L  I  G  N  F  Y  Y  G  G  S  T  Y  Y  N  P  S  L  K  G  R  A  A  I  S  V  D  T  S 
                    Query_4107   91   CTGGAGTTGATTGGAAATTTCTATTATGGTGGGAGCACCTACTATAACCCGTCCCTCAAGGGTCGAGCCGCCATTTCCGTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-39*01  139  .......G......G.G.A........A................C...............A......T.A....A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  V  T  S  V  T  A  A  D  R  A  V  Y  R  C  A  R  R  E  K  W  L  Q  D 
                    Query_4107   181  AAGAACCAATTCTCCCTGAAGGTGACCTCTGTGACCGCCGCAGACAGGGCTGTATATCGCTGTGCGAGACGGGAGAAGTGGCTACAAGAC  270
V  91.2% (228/250)  IGHV4-39*01  229  ........G............C...G....................C......G...TA...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD5-12*01  9    ----------------------------------------------------------------------------.........-----  17

                                      GT------------------->                                  
                                       S  G  G  P  F  *  L  L  G  P  G  N  P  G  H  H  L  L   
                    Query_4107   271  TCAGGGGGGCCCTTTTGACTACTGGGGCCAGGGAATCCTGGTCACCATCTCCTCAG  326
J  95.3% (41/43)    IGHJ4*02     6    -------------......................C..........G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_195352

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGCAGTTAC	CTTTAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGCAGTTACCTTTATTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_4108   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTACAAACTA  90
V  94.8% (276/291)  IGHV5-51*01  6    .................................................................G...........G......C.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  D  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_4108   91   CTGGATCGACTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ........G...................................................................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  L  E  G  Q  I  T  I  S  A  D  N  S  I  G  T  A  Y  L  Q  L  H  S  L  K  A  S  D  T  A
                    Query_4108   181  GTCCCTCGAAGGCCAAATCACCATCTCAGCCGACAACTCCATCGGCACCGCCTACCTGCAGTTGCACAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  ....T..C.......GG...................G......A..................G.AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_4108   271  CATGTATTACTGTGCGAGACATGGGGATGATAGTGGCAGTTACCTTTATTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  94.8% (276/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD1-26*01  4    -----------------------------.......G..C...-----------------------------------------------  17
J  98.1% (53/54)    IGHJ6*02     9    -------------------------------------------------....A....................................  49

                                                   
                                        T  V  S  S 
                    Query_4108   361  CACCGTCTCCTCA  373
J  98.1% (53/54)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_95433

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*02                                                                                            396     2e-112
IGHD3-9*01                                                                                            27.6    9e-04 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*02	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TTTTC	TTACGATATTTTGTCTG	CCAACACA	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTTTTCTTACGATATTTTGTCTGCCAACACAATGGACGTC	AFSYDILSANTMDV	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	71	4	0	94.7
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	18	6	0	75
FR3-IMGT	178	291	114	109	5	0	95.6
CDR3-IMGT (germline)	292	294	3	3	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                     <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  L  T 
                    Query_4109  4    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTAAGGCTTCTGGATACAGCCTCACC  93
V  93.5% (272/291)  IGHV1-2*02  1    .....G.....G...........G.........................................C................C.T.....  90
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                     GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                      G  Y  S  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  V  N  S  G  A  T  N  Y 
                    Query_4109  94   GGCTACTCTGTGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATTAATGTTAACAGTGGCGCCACAAATTAT  183
V  93.5% (272/291)  IGHV1-2*02  91   .......A.A....................................................C..CCC.........T.G......C...  180
                                      G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                     -----------------------------------------------FR3-IMGT-----------------------------------
                                      A  Q  K  F  Q  G  G  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  T  S  D  D 
                    Query_4109  184  GCACAGAAGTTTCAGGGCGGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCGTACATGGAGCTGAGCAGGCTGACATCTGACGAC  273
V  93.5% (272/291)  IGHV1-2*02  181  ..................A.....................................C......................G..........  270
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                     -----------------><----------------CDR3-IMGT--------------->                              
                                      T  A  V  Y  Y  C  A  F  S  Y  D  I  L  S  A  N  T  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_4109  274  ACGGCCGTCTATTACTGTGCGTTTTCTTACGATATTTTGTCTGCCAACACAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  363
V  93.5% (272/291)  IGHV1-2*02  271  ........G............---------------------------------------------------------------------  291
                                      T  A  V  Y  Y  C  A                                                                      
D  94.1% (16/17)    IGHD3-9*01  4    --------------------------.............A...-----------------------------------------------  20
J  100.0% (42/42)   IGHJ6*02    21   ---------------------------------------------------.......................................  59

                                        
                                      S 
                    Query_4109  364  TCA  366
J  100.0% (42/42)   IGHJ6*02    60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_195350

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  N  W  L  R  Q  A  P  G  K  G  P  
                    Query_4110   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAATTGGCTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  93.2% (233/250)  IGHV3-23*01  47   ..........................................G..G.T.....A...GC...G........................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_4110   91   AGTGGGTCTCAGCGATTACTGGGAGTGGTAGTAGCACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  .............T....G...T......G..............G......................................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_4110   181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  93.2% (233/250)  IGHV3-23*01  227  ...............................G....................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4110   271  ATTCACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_195351

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-10*01                                                                                           10.3    115  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGCCGTCA	GGGGA	CC	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGCCGTCAGGGGACCGGTTCGACCCC	ARWPSGDRFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  P  Y  Y  W  G  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_4111   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGACCTTACTACTGGGGCTGGATCCGGCAGACCCCGGGGAAGGGACTGGAG  90
V  93.8% (228/243)  IGHV4-59*01  49   .........................................TAG..........A..............C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  P  K  N 
                    Query_4111   91   TGGATTGGGTATATCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGCCCAAGAAC  180
V  93.8% (228/243)  IGHV4-59*01  139  ...............T.................................................................T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  R  V  T  S  M  N  A  A  D  T  A  V  Y  Y  C  A  R  W  P  S  G  D  R  F  D  P 
                    Query_4111   181  CAGTTCTCCCTCAGGGTGACCTCTATGAACGCTGCGGACACGGCCGTTTATTACTGTGCGAGATGGCCGTCAGGGGACCGGTTCGACCCC  270
V  93.8% (228/243)  IGHV4-59*01  229  ...........G.A.C...G....G...C..................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-10*01  16   ------------------------------------------------------------------------.....-------------  20
J  100.0% (45/45)   IGHJ5*02     7    -------------------------------------------------------------------------------...........  17

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4111   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (45/45)   IGHJ5*02     18   ..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_316881

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           361     5e-102
IGHD3-3*01                                                                                            39.1    3e-07 
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTACC	GTACAAAAAGAATCGGATG	ATTACGATTTTTGGAGTGGT	AAAGAGCCCCAAACCG	ACTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCGTACAAAAAGAATCGGATGATTACGATTTTTGGAGTGGTAAAGAGCCCCAAACCGACTCGTTCGACCCC	TVQKESDDYDFWSGKEPQTDSFDP	249	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	110	4	0	96.5
CDR3-IMGT (germline)	249	251	3	3	0	0	100
Total	N/A	N/A	251	241	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4112   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAAAGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (241/251)  IGHV3-15*01  47   .......T.............................T........C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  T  K  N  D  V  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_4112   91   AGTGGGTTGGCCGTATTAAAACCAAAAATGATGTTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGGGATG  180
V  96.0% (241/251)  IGHV3-15*01  137  .....................G.....C.....G...................................................A....  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  V  Q  K  E  S  D  
                    Query_4112   181  ATTCAAAAAACACACTGTATCTGCAAATGAATAGCCTGAAAACCGAGGACACAGCAGTGTATTACTGTACCGTACAAAAAGAATCGGATG  270
V  96.0% (241/251)  IGHV3-15*01  227  .............G.................C.......................C...............-------------------  297
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    

                                      ----------CDR3-IMGT------------------------------>                                  
                                      D  Y  D  F  W  S  G  K  E  P  Q  T  D  S  F  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_4112   271  ATTACGATTTTTGGAGTGGTAAAGAGCCCCAAACCGACTCGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  354
D  100.0% (20/20)   IGHD3-3*01   3    ....................----------------------------------------------------------------  22
J  95.8% (46/48)    IGHJ5*02     4    ------------------------------------...G................................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_195358

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           343     2e-96
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CATGCTTTCCTCGACTGATATGT	CGTTCGGGGGA	TTTTTGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACATGCTTTCCTCGACTGATATGTCGTTCGGGGGATTTTTGATTGACCAG	ARDMLSSTDMSFGGFLIDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  S  S  R  S  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_4113   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGACTCCATCAGCAGTAGAAGTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGG  90
V  93.6% (235/251)  IGHV4-39*02  49   ...................C...........G...............T...........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  E  S  R  V  A  I  S  I  D  T  S 
                    Query_4113   91   CTGGAATGGATTGGGAATATCTATTATAGTGGGAGCACCGACTACAACCCGTCCCTCGAGAGTCGAGTCGCCATATCGATAGACACGTCC  180
V  93.6% (235/251)  IGHV4-39*02  139  .....G..........G......................T.................A...........A.......CG...........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  M  L  S  S  T  D 
                    Query_4113   181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACCGCCGCAGACACGGCTATTTATTACTGTGCGAGAGACATGCTTTCCTCGACTGAT  270
V  93.6% (235/251)  IGHV4-39*02  229  ........C............C....C........................G.G.................-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       M  S  F  G  G  F  L  I  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4113   271  ATGTCGTTCGGGGGATTTTTGATTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  90.9% (10/11)    IGHD3-16*01  13   ----....T......-------------------------------------------------  23
J  95.2% (40/42)    IGHJ4*02     7    ----------------------.....T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_324417

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         339     2e-95
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGAAATA	GGATATAGTGGATACG	GAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGAAATAGGATATAGTGGATACGGAATTGACTAT	ARGEIGYSGYGIDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  L  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_4114     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGCTTTGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-30-3*01  47   ..............................................C......A.................G..................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  F  T  S  F  D  G  T  N  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4114     91   AGTGGGTGGCATTTACATCATTTGATGGAACCAATAAATACTACGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (233/249)  IGHV3-30-3*01  137  ...........G...T.....A........G..............C............................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                        R  N  A  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  G  E  I  G  Y  S  G  
                    Query_4114     181  GGAACGCGCTATCGCTGCAGATGAACAGCCTGAGAGCTGAGGACACGGCTGTATATTTCTGTGCGAGAGGAGAAATAGGATATAGTGGAT  270
V  93.6% (233/249)  IGHV3-30-3*01  227  A....A....G.AT.....A................................G....A...........---------------------  295
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.8% (15/16)    IGHD5-12*01    3    -----------------------------------------------------------------------------...........C.  15

                                        ------------->                                  
                                        Y  G  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4114     271  ACGGAATTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  93.8% (15/16)    IGHD5-12*01    16   ...---------------------------------------------  18
J  97.6% (41/42)    IGHJ4*02       7    ------.......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_280319

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           378     3e-107
IGHD3-22*01                                                                                           33.4    1e-05 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGGGGAC	ATTACTATGATAGTAGT	AATCAATTCGTCCGAGAAGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGACATTACTATGATAGTAGTAATCAATTCGTCCGAGAAGGTTTTGATATC	ARRGHYYDSSNQFVREGFDI	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	245	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_4115   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (245/248)  IGHV3-11*06  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  S  T  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  E  N  A  
                    Query_4115   91   AGTGGGTTTCATACATTAGTAGTAGTAGTACTTACACAAACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGAGAACGCCA  180
V  98.8% (245/248)  IGHV3-11*06  137  ..............................G...................................................C.......  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  H  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  R  G  H  Y  Y  D  S  
                    Query_4115   181  AGAACTCACTGTATCTGCACATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGACGGGGACATTACTATGATAGTA  270
V  98.8% (245/248)  IGHV3-11*06  227  ...................A................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (17/17)   IGHD3-22*01  3    ---------------------------------------------------------------------------...............  17

                                      R3-IMGT------------------------>                                  
                                      S  N  Q  F  V  R  E  G  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4115   271  GTAATCAATTCGTCCGAGAAGGTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCCTCAG  336
D  100.0% (17/17)   IGHD3-22*01  18   ..----------------------------------------------------------------  19
J  97.7% (43/44)    IGHJ3*02     7    ----------------------.......................................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_283258

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           338     5e-95
IGHD3-10*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCACTTCAA	GTATTTCTATGGTTCGGGAAATTATTAT	CACGCCGCCAAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATCACTTCAAGTATTTCTATGGTTCGGGAAATTATTATCACGCCGCCAAGTTTGACTCC	VRDHFKYFYGSGNYYHAAKFDS	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  K  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4116   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTCAAGAATTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-48*03  47   ....................................CC....GT.G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  T  T  G  T  I  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4116   91   AGTGGATTTCATACATTAGTACTACTGGCACTATCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCC  180
V  93.2% (233/250)  IGHV3-48*03  137  .....G...............G..G...T.G..C.......................................................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      Q  N  S  L  Y  L  Q  M  K  S  L  R  A  E  D  T  A  I  Y  Y  C  V  R  D  H  F  K  Y  F  Y  
                    Query_4116   181  AGAACTCACTGTATCTGCAAATGAAGAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGTAAGAGATCACTTCAAGTATTTCTATG  270
V  93.2% (233/250)  IGHV3-48*03  227  .........................C........................G............CG.....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  89.3% (25/28)    IGHD3-10*01  1    -------------------------------------------------------------------------------.....A.....  11

                                      -CDR3-IMGT--------------------------->                                  
                                      G  S  G  N  Y  Y  H  A  A  K  F  D  S  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_4116   271  GTTCGGGAAATTATTATCACGCCGCCAAGTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  342
D  89.3% (25/28)    IGHD3-10*01  12   .......G.G.......-------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------.......A...............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_250266

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           290     2e-80
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGGCCCC	ARGGWRRQRNWFGP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	215	30	0	87.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_4117   1    ACCCTGTCCCTCACCTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  87.8% (215/245)  IGHV4-34*01  49   .......................CTA..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_4117   91   TGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGGGTCACCATGTCAGTAGACACCTCCAAGAAC  180
V  87.8% (215/245)  IGHV4-34*01  139  ................A............CA.C.AC......C..T......A......A........A...........G.........  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  G  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W 
                    Query_4117   181  CAAATCTCCCTGAAGTTGGGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCTGGCGAAGACAGCGCAACTGG  270
V  87.8% (215/245)  IGHV4-34*01  229  ..GT...........C..A......T.....................G.....C......A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  96.0% (48/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------.......  8

                                      -------->                                  
                                       F  G  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4117   271  TTCGGCCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  96.0% (48/50)    IGHJ5*02     9    ....A..................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_250267

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           344     6e-97
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATAG	GGGTG	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATAGGGGTGACTATTTTGACTAC	ARGLHYYDRGDYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4118   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTCACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.0% (235/250)  IGHV4-31*03  49   ..................................C......C.........T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  Y  Y  G  G  T  T  Y  Y  N  K  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4118   91   CTGGAGTGGATTGGGTTCATTTATTACGGTGGGACCACCTACTACAATAAGTCCCTCAAGAGTCGAGTCACCATATCGGTAGACACGTCT  180
V  94.0% (235/250)  IGHV4-31*03  139  ................A...C......A......G............CCC..................T........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R 
                    Query_4118   181  AAGAACCAGTTCTCCCTGAATCTGCGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCTCCATTACTATGATAGG  270
V  94.0% (235/250)  IGHV4-31*03  229  ....................G...A.............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD3-22*01  3    ----------------------------------------------------------------------------.............-  15

                                      ----------------->                                  
                                       G  D  Y  F  D  Y  W  G  Q  G  I  L  V  P  V  S  S  
                    Query_4118   271  GGTGACTATTTTGACTACTGGGGCCAGGGAATCCTGGTCCCCGTCTCCTCAG  322
J  93.8% (45/48)    IGHJ4*02     1    ----....C......................C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_24747

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           383     1e-108
IGHD2-15*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGC	ATATTGTAGTGATAGTAACTGCTAC	CCGAGGGAGCG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGCATATTGTAGTGATAGTAACTGCTACCCGAGGGAGCGCTACTTTGACCAC	ARLAYCSDSNCYPRERYFDH	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  A  G  E  S  L  R  I  S  C  K  V  S  G  Y  K  F  A  T  Y
                    Query_4119   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGGCGGGGGAGTCTCTGAGGATCTCCTGTAAGGTGTCTGGATACAAGTTTGCCACCTA  90
V  92.4% (267/289)  IGHV5-51*03  6    ..................................C...............A..............GT..........GC...A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  M  Y  P  S  D  S  D  A  R  Y  S  P
                    Query_4119   91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATGTATCCTAGTGACTCTGATGCCAGATACAGCCC  180
V  92.4% (267/289)  IGHV5-51*03  96   C...................................................A....C......G...........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  R  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  G  L  G  A  S  G  T  A
                    Query_4119   181  GTCCTTTGAAGGCCGGGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGTGGCCTGGGGGCCTCGGGCACCGC  270
V  92.4% (267/289)  IGHV5-51*03  186  ......CC......A.........C.........................................CA.....AA........A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  Y  C  A  R  L  A  Y  C  S  D  S  N  C  Y  P  R  E  R  Y  F  D  H  W  G  Q  G  T  L
                    Query_4119   271  CATGTATTACTGTGCGAGACTGGCATATTGTAGTGATAGTAACTGCTACCCGAGGGAGCGCTACTTTGACCACTGGGGCCAGGGAACCCT  360
V  92.4% (267/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  88.0% (22/25)    IGHD2-15*01  4    ------------------------...........G.G...G.......-----------------------------------------  28
J  95.7% (45/47)    IGHJ4*02     2    ------------------------------------------------------------..........T...................  31

                                                       
                                        V  T  V  S  S  
                    Query_4119   361  GGTCACCGTCTCGTCAG  377
J  95.7% (45/47)    IGHJ4*02     32   ............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_251369

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           374     8e-106
IGHD1-26*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GTTCCGTAGG	AGTGGGAGCTACTAC	ACTTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGTTCCGTAGGAGTGGGAGCTACTACACTTTGGTACTTTGACTAC	AKGSVGVGATTLWYFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	244	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  M  G  L  
                    Query_4120   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGATGGGGCTGG  90
V  98.0% (244/249)  IGHV3-23*01  47   .................................................................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  R  S  T  Y  Y  A  D  S  V  K  G  R  F  T  F  S  R  D  N  S  
                    Query_4120   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTCGCAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCTTCTCCAGAGACAATTCCA  180
V  98.0% (244/249)  IGHV3-23*01  137  .............................G.T.......................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  S  V  G  V  G  A  
                    Query_4120   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAAGGTTCCGTAGGAGTGGGAGCTA  270
V  98.0% (244/249)  IGHV3-23*01  227  ....................................................A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD1-26*01  6    -------------------------------------------------------------------------------...........  16

                                      GT-------------------->                                  
                                      T  T  L  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4120   271  CTACACTTTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (15/15)   IGHD1-26*01  17   ....-----------------------------------------------------  20
J  100.0% (46/46)   IGHJ4*02     3    -----------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_332429

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           413     2e-117
IGHD6-25*01                                                                                           12.2    35    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TT	AGCGGC	GAAGGTAACCTTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTAGCGGCGAAGGTAACCTTATTGACTAC	AKLSGEGNLIDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  R  Y
                    Query_4121   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCAGGTA  90
V  95.5% (277/290)  IGHV5-51*01  6    ..................................................................T....................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  Y  D  V  R  Y  R  P
                    Query_4121   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTATGATGTGAGATACAGACC  180
V  95.5% (277/290)  IGHV5-51*01  96   .......................................................................C....ACC........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4121   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGCACCGCCTTTTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (277/290)  IGHV5-51*01  186  ...................................A.................ACC..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  K  L  S  G  E  G  N  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4121   271  CATTTATTACTGTGCGAAACTTAGCGGCGAAGGTAACCTTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.5% (277/290)  IGHV5-51*01  276  ...G.............G..---------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD6-25*01  10   ----------------------......-------------------------------------------------------  15
J  100.0% (42/42)   IGHJ4*02     7    -----------------------------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_332428

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD3-22*01                                                                                           16.1    2.3   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCAC	ARAPPFDYDLDVRGIHNFDH	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	236	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4122   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (236/244)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_4122   91   TGGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAGC  180
V  96.7% (236/244)  IGHV4-59*01  139  ..........A.................G.............................................A.............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D 
                    Query_4122   181  CAGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGAC  270
V  96.7% (236/244)  IGHV4-59*01  229  ..................AG...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-22*01  6    ----------------------------------------------------------------------------........------  13

                                      GT------------------------>                                  
                                       V  R  G  I  H  N  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4122   271  GTAAGGGGAATCCACAACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  97.8% (44/45)    IGHJ4*02     4    ----------------........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_136440

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTGTACGAGGCGACTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATGTGTACGAGGCGACTCATCAATATAGTGGCTACATGATTAATGACTAC	GKDVYEATHQYSGYMINDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4123   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAAGTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  E  S  G  A  S  T  N  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4123   91   AATGGGTCTCAGGTATCAGTGAGAGCGGTGCTAGCACAAATCACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  .G..........C...T....GT..T....G.......T.CT................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  I  S  L  R  V  E  D  T  A  V  Y  Y  C  G  K  D  V  Y  E  A  T  H  
                    Query_4123   181  AGAACACGCTGTATCTGCAAATGATCAGCCTGAGAGTCGAGGACACGGCCGTATATTACTGTGGGAAAGATGTGTACGAGGCGACTCATC  270
V  94.0% (235/250)  IGHV3-23*01  227  ........................A...........C..........................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4123   271  AATATAGTGGCTACATGATTAATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_251362

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           394     7e-112
IGHD1-26*01                                                                                           12.2    35    
IGHJ3*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAAACAGCC	CTACTA	GTAG	TGCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGGAAACAGCCCTACTAGTAGTGCTGTTGATAGC	GRGNSPTSSAVDS	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_4124   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTTAGTAGTTA  90
V  93.4% (271/290)  IGHV1-69*06  6    ..................G..............................................................C..C..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  K  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  D  T  S  T  Y  A  Q
                    Query_4124   91   TGGTATCAGCTGGGTGCGAAAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGATACATCCACCTATGCACA  180
V  93.4% (271/290)  IGHV1-69*06  96   ..C................C...................................................G....G.A.A...C.....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  Y  Q  G  R  V  T  I  T  A  D  K  T  T  A  T  T  Y  M  E  L  S  S  L  R  S  D  D  T  A
                    Query_4124   181  GAAGTACCAGGGCAGAGTCACGATTACCGCGGACAAAACCACGGCCACAACCTACATGGAGCTGAGCAGCCTGAGATCTGACGACACGGC  270
V  93.4% (271/290)  IGHV1-69*06  186  .....T...............................T.....AG....G...............................G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  W  G  R  G  N  S  P  T  S  S  A  V  D  S  W  G  Q  G  T  M  V  S  V  S  S  
                    Query_4124   271  CGTGTATTACTGGGGGAGAGGAAACAGCCCTACTAGTAGTGCTGTTGATAGCTGGGGCCAAGGGACAATGGTCTCCGTCTCTTCAG  356
V  93.4% (271/290)  IGHV1-69*06  276  ............T.C.....------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD1-26*01  14   -----------------------------......---------------------------------------------------  19
J  93.6% (44/47)    IGHJ3*02     4    ---------------------------------------....T......T......................A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_208071

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           396     2e-112
IGHD1-26*01                                                                                           10.3    133   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AGAGGAGGGC	CTACT	GCGA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGAAGAGGAGGGCCTACTGCGAGGTATGGACGTC	AKEEEGLLRGMDV	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	6	2	0	75
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  D  N
                    Query_4125   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGGCACCTTCAGCGACAA  90
V  93.5% (272/291)  IGHV1-69*06  6    ..................G...............................................T..................AG.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        T  L  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  Y  G  T  A  N  Y  A  Q
                    Query_4125   91   TACTCTCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTATGGAACAGCAAATTACGCACA  180
V  93.5% (272/291)  IGHV1-69*06  96   .G..A...G...........................................................T...T........C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  F  T  A  D  K  S  T  S  T  A  Y  M  E  M  S  S  L  R  S  E  D  T  A
                    Query_4125   181  GAAGTTCCAGGGCAGAGTCACCTTTACCGCGGACAAGTCCACGAGCACAGCCTACATGGAGATGAGCAGCCTGAGATCTGAAGACACGGC  270
V  93.5% (272/291)  IGHV1-69*06  186  .....................GA.............A........................C...................G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                 
                                        V  Y  Y  C  A  K  E  E  E  G  L  L  R  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4125   271  CGTATATTACTGTGCCAAAGAAGAGGAGGGCCTACTGCGAGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTTTCCTCA  355
V  93.5% (272/291)  IGHV1-69*06  276  ...G...........G.G...----------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD1-26*01  14   -------------------------------.....-------------------------------------------------  18
J  97.8% (44/45)    IGHJ6*02     18   ----------------------------------------......................................C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_86370

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           325     3e-91
IGHJ4*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	N/A	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCACA	N/A	N/A	ACTTTCCGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAACTTTCCGCTTC	PQLSAS	294	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	62	9	0	87.3
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	180	30	20	7	3	66.7
FR3-IMGT	181	293	114	96	17	1	84.2
CDR3-IMGT (germline)	294	299	6	6	0	0	100
Total	N/A	N/A	296	256	36	4	86.5


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  G  G  L  V  G  R  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  
                    Query_4126   8    TGCAGCTGGTGCAGTCTGGAGGAGGCTTAGTAGGGCGGGGGGGGTCTCTTAGACTCTCTTGTGCAGCCTCTGGATTCACTTTCAGTAAGG  97
V  86.5% (256/296)  IGHV3-15*01  5    ...........G.......G........G...AA..CT........C...........C.............................C.  94
                                         Q  L  V  E  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  

                                      ----><--------------------FR2-IMGT---------------------><----------CDR2-IMGT---------><---
                                      A  W  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  L  I  K   K  K  E  K  A  R  Q     C 
                    Query_4126   98   CCTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCTTATTAAAA-AAAAGGAGAAGGCGAGACAA---TGT  183
V  86.5% (256/296)  IGHV3-15*01  95   .........G............................................G........GC...ACT..T..T.G.....CAGAC.  184
                                      A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  

                                      -------------------------------------------------FR3-IMGT---------------------------------
                                       M  L  *  P  *  R  T  D  S  P  S  Q  E  M  T  Q  Q  T  R  Y  I  W  K  *  A  T  *  E  P  T 
                    Query_4126   184  ATGCTGTAGCCGTGAAGGACAGATTCACCATCTCAAGAGATGACTCAACAAACACGGTATATCTGGAAATGAGCAACCTGAGAACCGACG  273
V  86.5% (256/296)  IGHV3-15*01  185  .C....C.C.......A.G........................T....A.......C.G......C......A..G.....A......G.  274
                                      Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  

                                      -------------------><----CDR3-IMGT--->                                  
                                       T  Q  P  C  I  I  V  P  Q  L  S  A  S  G  A  R  E  *  W  S  P  S  P  Q 
                    Query_4126   274  ACACAGCCGTGTATTATTGTACCACAACTTTCCGCTTCTGGGGCCAGGGAATGATGGTCACCGTCTCCTCAG  345
V  86.5% (256/296)  IGHV3-15*01  275  ................C.........----------------------------------------------  300
                                      D  T  A  V  Y  Y  C  T  T                                               
J  91.4% (32/35)    IGHJ4*02     14   -------------------------------------..............CCC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_332426

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         341     5e-96
IGHD3-16*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	GGGGGAGT	GCGGGTATTCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGGGGAGTGCGGGTATTCCTCTAC	AREGGVRVFLY	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  V  R  Q  P  P  G  K  G  L 
                    Query_4127     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCTATTAGCAGTGGTTATTACTGGGGCTGGGTCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  94.0% (233/248)  IGHV4-38-2*02  49   ..................A................C..C...........C............A..........................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  V  Y  H  S  G  S  T  F  Y  S  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K 
                    Query_4127     91   GAGTGGATTGGGAGTGTCTATCATAGTGGGAGCACCTTCTACAGCCCGTCCCTCAAGAGCCGAGTCAGCATTTCAGTAGACACGTCCAAG  180
V  94.0% (233/248)  IGHV4-38-2*02  139  ...............A.....................A.....A...............T.......C...A..................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                         N  Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  V  R  V  F  L 
                    Query_4127     181  AACCAGTTCTCCCTGAAGGTTAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGAAGGGGGAGTGCGGGTATTCCTC  270
V  94.0% (233/248)  IGHV4-38-2*02  229  ..................C.G..C................................C...........----------------------  296
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD3-16*01    18   ---------------------------------------------------------------------........-------------  25
J  100.0% (38/38)   IGHJ4*02       11   -----------------------------------------------------------------------------------------.  11

                                        -->                                  
                                         Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4127     271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (38/38)   IGHJ4*02       12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_208074

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           388     5e-110
IGHD1-26*01                                                                                           10.3    132   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TCAGGCACGAGAA	GGGAG	GCGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGGCACGAGAAGGGAGGCGGGGCGAACGACTAC	VRHEKGGGANDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	284	1	1	0	0	100
Total	N/A	N/A	284	266	18	0	93.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P  N  Y
                    Query_4128   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCCAATTA  90
V  93.7% (266/284)  IGHV5-51*03  6    .............................................................................GC...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  A  D  S  D  T  R  Y  S  L
                    Query_4128   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAACATCTATCCTGCAGACTCTGACACCAGATACAGTCT  180
V  93.7% (266/284)  IGHV5-51*03  96   .....................................................T...........GT........T...........C.C  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  S  G
                    Query_4128   181  GACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACAGCGG  270
V  93.7% (266/284)  IGHV5-51*03  186  .T.....C.............................................................C................C..C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4128   271  CGTGTATTATTGTGTCAGGCACGAGAAGGGAGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  351
V  93.7% (266/284)  IGHV5-51*03  276  .A.......C....-------------------------------------------------------------------  289
                                        M  Y  Y  C                                                                     
D  100.0% (5/5)     IGHD1-26*01  9    ---------------------------.....-------------------------------------------------  13
J  97.4% (37/38)    IGHJ4*02     9    -------------------------------------------....................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_332420

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           322     2e-90
IGHD2-15*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGAGTTC	TTGCAGTGGTGGCACGTGCTAC	CTGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGAGTTCTTGCAGTGGTGGCACGTGCTACCTGTTCTACTACTACGCTGTGGACGTC	AGSSCSGGTCYLFYYYAVDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	226	20	0	91.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  N  S  H  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_4129   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTAGTAATAGTCACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  91.9% (226/246)  IGHV4-39*01  49   ...............................G.........C....G....T.....................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  R  I  I  Y  H  S  G  S  A  F  Y  N  P  S  L  E  N  R  V  T  M  S  V  D  T  S 
                    Query_4129   91   CTGGAGTGGATGAGGATAATCTATCATAGTGGGAGCGCCTTCTACAACCCGTCCCTCGAGAATCGAGTCACCATGTCCGTTGACACGTCC  180
V  91.9% (226/246)  IGHV4-39*01  139  ...........TG...GT......T...........A...A................A...G............A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  V  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  H  C  A  G  S  S  C  S  G  G  T 
                    Query_4129   181  AAGAACCAGGTCTCCCTGAGGTTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATCACTGTGCGGGGAGTTCTTGCAGTGGTGGCACG  270
V  91.9% (226/246)  IGHV4-39*01  229  .........T.........A.C...................................T........------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  81.8% (18/22)    IGHD2-15*01  7    --------------------------------------------------------------------------...T........T.GC  22

                                      DR3-IMGT------------------------>                                 
                                       C  Y  L  F  Y  Y  Y  A  V  D  V  W  G  Q  G  A  T  I  T  V  S  S 
                    Query_4129   271  TGCTACCTGTTCTACTACTACGCTGTGGACGTCTGGGGCCAGGGGGCCACGATCACCGTCTCCTCA  336
D  81.8% (18/22)    IGHD2-15*01  23   ......------------------------------------------------------------  28
J  90.9% (50/55)    IGHJ6*02     8    -----------...........G.A................A...A.....G..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_332423

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           254     1e-69
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAATTGGCCA	ATTACGATTTTTGGAG	CGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATAAATTGGCCAATTACGATTTTTGGAGCGGCTTTGACCTC	AKDKLANYDFWSGFDL	236	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	20	22	3	3	0	0	100
CDR1-IMGT	23	46	24	19	5	0	79.2
FR2-IMGT	47	97	51	46	5	0	90.2
CDR2-IMGT	98	121	24	19	5	0	79.2
FR3-IMGT	122	235	114	99	15	0	86.8
CDR3-IMGT (germline)	236	243	8	7	1	0	87.5
Total	N/A	N/A	224	193	31	0	86.2


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  L  T  F  S  N  Y  A  M  S  W  V  R  Q  V  P  G  K  G  L  E  W  V  A  G  I  S  G  S 
                    Query_4130   20   TCTGGACTCACATTCAGCAATTATGCCATGAGTTGGGTCCGCCAGGTTCCAGGGAAGGGGCTGGAGTGGGTCGCAGGAATTAGTGGGAGT  109
V  86.2% (193/224)  IGHV3-23*01  73   ......T....C..T....GC...........C.............C.........................T...CT........T...  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  Y  S  I  Y  Y  A  N  S  V  R  G  R  F  T  I  S  R  D  N  S  K  N  T  V  H  L  Q  G  H 
                    Query_4130   110  GGTTATAGTATATACTATGCAAACTCCGTTAGGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACAGTCCATCTGCAAGGGCAC  199
V  86.2% (193/224)  IGHV3-23*01  163  ...GG...C.C......C...G.......G.A.......................................GC.GT........AT.A..  252
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><-------------------CDR3-IMGT------------------>      
                                       S  L  R  D  D  D  T  A  I  Y  Y  C  A  K  D  K  L  A  N  Y  D  F  W  S  G  F  D  L  W  G 
                    Query_4130   200  AGCCTGAGAGACGACGACACGGCCATTTATTACTGTGCAAAAGATAAATTGGCCAATTACGATTTTTGGAGCGGCTTTGACCTCTGGGGC  289
V  86.2% (193/224)  IGHV3-23*01  253  ..........C...G.........G.A...........G.....----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  100.0% (16/16)   IGHD3-3*01   3    -------------------------------------------------------................-------------------  18
J  93.2% (41/44)    IGHJ4*02     5    --------------------------------------------------------------------------.......TA.......  20

                                                                  
                                       Q  G  T  L  L  T  V  S  S  
                    Query_4130   290  CAGGGAACCCTGCTCACCGTCTCCTCAG  317
J  93.2% (41/44)    IGHJ4*02     21   ............G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_332422

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGATGGCCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTC	VRQSSDGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  S  Y
                    Query_4131   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCAGTTA  90
V  95.5% (278/291)  IGHV5-51*01  6    ....................................C.......................................AG.........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  T  G  L  E  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  S  P
                    Query_4131   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGTGGATGGGGATCATCTTTCCGGATGACTCTGATACCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ................................A..........................A...T.G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4131   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  ............................................G.....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                           
                                        K  Y  Y  C  V  R  Q  S  S  D  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_4131   271  CAAGTATTATTGTGTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  355
V  95.5% (278/291)  IGHV5-51*01  276  ..T......C....C......----------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                   
J  100.0% (42/42)   IGHJ6*02     15   -------------------------------------------..........................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_136445

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           361     4e-102
IGHD2-2*01                                                                                            31.5    5e-05 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGGGG	TATTGTAGTAGTGCCAACTGATATG	GGGGCAGGGGGCCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGGGGTATTGTAGTAGTGCCAACTGATATGGGGGCAGGGGGCCCATTTGACCAC	ARLRGIVVVPTDMGAGGPFDH	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4132   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (240/249)  IGHV4-31*03  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  S  T  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_4132   91   CTGGAGTGGATTGGGTACATCTATTATAGTGGGAGCACCTACTACAGTACGTCCCTCAAGAGTCGACTTACCATATCGGTAGACACGTCT  180
V  96.4% (240/249)  IGHV4-31*03  139  ..........................C...................ACC.................G..........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       Q  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  R  G  I  V  V  V 
                    Query_4132   181  CAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGACTTCGGGGTATTGTAGTAGTG  270
V  96.4% (240/249)  IGHV4-31*03  229  A....................................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.0% (22/25)    IGHD2-2*01   5    -----------------------------------------------------------------------------............A  17

                                      CDR3-IMGT-------------------------->                                  
                                       P  T  D  M  G  A  G  G  P  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4132   271  CCAACTGATATGGGGGCAGGGGGCCCATTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  88.0% (22/25)    IGHD2-2*01   18   ...G...C....----------------------------------------------------------  29
J  97.7% (42/43)    IGHJ4*02     6    ---------------------------......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_136444

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           279     3e-77
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	216	28	6	86.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_4133   4    CCCTGAGACTCTCCTGTGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.4% (216/250)  IGHV4-34*01  50   .....TCC...A....C.....C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_4133   94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.4% (216/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_4133   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.4% (216/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_4133   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_24741

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           332     3e-93
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	ACCCATT	TTGCAGTGGTGGTAGGTGC	GTCTCGGGCTTGAG	TGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCATTTTGCAGTGGTGGTAGGTGCGTCTCGGGCTTGAGTGACCAC	ARDPFCSGGRCVSGLSDH	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  S  G  Y  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_4134   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGCCCTTCAGTGGCTACTACTGGAACTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  93.4% (228/244)  IGHV4-34*01  49   .................................T..........T..........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  R  G  G  S  T  T  Y  N  P  S  L  K  S  R  V  S  M  S  V  D  T  S  K  N 
                    Query_4134   91   TGGATTGGGGAAATCAATCGCGGTGGAAGCACCACCTACAACCCGTCCCTCAAGAGTCGAGTCAGCATGTCGGTAGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-34*01  139  ...................ATA............A.............................C...A..A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  F  C  S  G  G  R  C 
                    Query_4134   181  CAGTTCTCCTTGACCCTGACCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGACCCATTTTGCAGTGGTGGTAGGTGC  270
V  93.4% (228/244)  IGHV4-34*01  229  .........C...AG....G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  89.5% (17/19)    IGHD2-15*01  7    -----------------------------------------------------------------------...T...........C...  25

                                      -------------------->                                  
                                       V  S  G  L  S  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4134   271  GTCTCGGGCTTGAGTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.6% (40/41)    IGHJ4*02     8    --------------....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_136446

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           294     6e-82
IGHD3-10*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CAATAAGG	CTATGAATCGGGG	TGCTCCCTCTGGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AATAAGGCTATGAATCGGGGTGCTCCCTCTGGGTAC	NKAMNRGAPSGY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	11	1	0	91.7
CDR1-IMGT	27	50	24	19	5	0	79.2
FR2-IMGT	51	101	51	50	1	0	98
CDR2-IMGT	102	125	24	19	5	0	79.2
FR3-IMGT	126	238	113	107	6	0	94.7
Total	N/A	N/A	224	206	18	0	92


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  G  S  G  F  I  F  S  T  S  A  M  H  W  I  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 
                    Query_4135   15   TGTGCAGGCTCTGGATTCATCTTCAGCACCTCTGCCATGCACTGGATCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATA  104
V  92.0% (206/224)  IGHV3-30*03  64   .......C...........C......T.G..A..G..........G............................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  L  D  G  S  D  K  Y  Y  A  D  S  V  K  G  R  F  T  L  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_4135   105  TCGTTGGATGGAAGTGATAAGTACTATGCAGACTCCGTGAAGGGCCGCTTCACCCTCTCCAGAGACAACTCCAAGAACACCCTGTATCTG  194
V  92.0% (206/224)  IGHV3-30*03  154  ..A.AT.........A....A..........................A......A.............T...........G.........  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-------------CDR3-IMGT------------>         
                                       Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  N  K  A  M  N  R  G  A  P  S  G  Y  W  G  Q 
                    Query_4135   195  CAAATGAACAGCCTGAGACCTGAGGACACGGCTGTCTATTACTGCAATAAGGCTATGAATCGGGGTGCTCCCTCTGGGTACTGGGGCCAG  284
V  92.0% (206/224)  IGHV3-30*03  244  ..................G................G........----------------------------------------------  287
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                                 
D  84.6% (11/13)    IGHD3-10*01  7    ----------------------------------------------------.....GT......-------------------------  19
J  100.0% (37/37)   IGHJ4*02     12   ------------------------------------------------------------------------------............  23

                                                               
                                       G  T  L  V  T  V  S  S  
                    Query_4135   285  GGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (37/37)   IGHJ4*02     24   .........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_320631

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            335     4e-94
IGHD6-6*01                                                                                            14.1    8.4  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAGGC	GCAGTTCGTC	GCGAATGAGTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAGGCGCAGTTCGTCGCGAATGAGTCTTGACTCC	ARDRRSSSRMSLDS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	24	3	0	88.9
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                     <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                        S  L  R  L  S  C  G  V  S  G  A  S  I  S  S  S  D  W  W  I  W  V  R  Q  S  P  G  K  G  
                    Query_4136  1    GGTCCCTGAGACTCTCCTGTGGTGTCTCTGGCGCCTCCATCAGCAGTAGTGACTGGTGGATTTGGGTCCGCCAGTCCCCAGGGAAGGGGC  90
V  92.8% (232/250)  IGHV4-4*02  47   ..A.....TCC...A....C.C.........T.G................A.........G.............C...............  136
                                        T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                     ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                     L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  E  K  S  
                    Query_4136  91   TGGAGTGGATTGGGGAAATCTATCACAGTGGGAGCACCAACTACAACCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGAGAAGTCCA  180
V  92.8% (232/250)  IGHV4-4*02  137  .........................T..............................A.........................C.......  226
                                     L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                     -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                     K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  D  R  R  S  S  S  R  
                    Query_4136  181  AGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCCTGTATTACTGTGCGAGAGACAGGCGCAGTTCGTCGCGAA  270
V  92.8% (232/250)  IGHV4-4*02  227  ..................A.....G.........................G...................--------------------  296
                                     K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD6-6*01  8    ---------------------------------------------------------------------------....C.....-----  17

                                     ------------->                                  
                                     M  S  L  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4136  271  TGAGTCTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.6% (41/42)    IGHJ4*02    7    ------......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_180058

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           375     2e-106
IGHD1-26*01                                                                                           14.1    8.2   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGCCCTTTTA	TGGGGGCTAC	ATGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGCCCTTTTATGGGGGCTACATGGATTGACTAC	ARCPFMGATWIDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	244	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4137   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (244/248)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  C  I  S  G  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4137   91   AGTGGGTCTCATGCATCAGTGGTGGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (244/248)  IGHV3-21*01  137  ............C...T...A..A..................................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  C  P  F  M  G  A  T  
                    Query_4137   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGATGCCCTTTTATGGGGGCTACAT  270
V  98.4% (244/248)  IGHV3-21*01  227  ....................................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD1-26*01  8    ------------------------------------------------------------------------------....A.....--  17

                                      ---------->                                  
                                      W  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4137   271  GGATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (42/42)   IGHJ4*02     7    ---..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_136448

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           382     4e-108
IGHD3-3*01                                                                                            16.1    2.6   
IGHJ5*01                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAAACAGTCGGCACACTGAGA	ATTATACC	CCCACGTCGGACGTTCTAG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAAACAGTCGGCACACTGAGAATTATACCCCCACGTCGGACGTTCTAGGGTTCGACTCC	ARRNSRHTENYTPTSDVLGFDS	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	267	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_4138   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGTTA  90
V  92.1% (267/290)  IGHV5-51*01  6    .......................................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  W  R  Q  M  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_4138   91   CTGGATCGCTTGGTGGCGCCAGATGCCCGGGAAAGGCCTGGAATTAATGGGGATCATCTACCCTGGTGACTCTGATACTAGATACAATCC  180
V  92.1% (267/290)  IGHV5-51*01  96   ........GC...GT...........................G.GG..............T.................C.......GC..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  A  T  I  Y  A  D  K  S  I  S  T  A  Y  L  Q  M  S  S  L  K  A  S  D  T  A
                    Query_4138   181  GTCCTTCCAAGGTCAGGCCACCATTTATGCCGACAAGTCCATCAGCACCGCCTACCTGCAGATGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  92.1% (267/290)  IGHV5-51*01  186  ............C....T......C.CA.................................TG...........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------------CDR3-IMGT--------------------------->           
                                        K  Y  F  C  A  R  R  N  S  R  H  T  E  N  Y  T  P  T  S  D  V  L  G  F  D  S  W  G  Q  G
                    Query_4138   271  CAAATACTTCTGTGCGAGACGAAACAGTCGGCACACTGAGAATTATACCCCCACGTCGGACGTTCTAGGGTTCGACTCCTGGGGCCAGGG  360
V  92.1% (267/290)  IGHV5-51*01  276  ..TG..T.A...........----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-3*01   24   -----------------------------------------........-----------------------------------------  31
J  97.8% (44/45)    IGHJ5*01     7    --------------------------------------------------------------------...................A..  28

                                                             
                                        T  L  V  T  V  S  S  
                    Query_4138   361  AACCCTGGTCACCGTCTCCTCAG  383
J  97.8% (44/45)    IGHJ5*01     29   .......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_180051

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           427     9e-122
IGHD1-26*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCG	AGTGGGAGCTACT	TGAGGCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCGAGTGGGAGCTACTTGAGGCATTTGACTAC	ARDLEWELLEAFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	282	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  R  Y
                    Query_4139   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGATA  90
V  96.9% (282/291)  IGHV1-69*06  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  S  F  G  T  A  H  Y  A  Q
                    Query_4139   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTAGCTTTGGAACAGCACACTACGCACA  180
V  96.9% (282/291)  IGHV1-69*06  96   .................................................................T......T......A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  R  S  T  S  T  A  Y  M  E  L  S  S  L  S  S  E  D  T  A
                    Query_4139   181  GAGATTCCAGGGCAGAGTCACGATTACCGCGGACAGATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGCTCTGAGGACACGGC  270
V  96.9% (282/291)  IGHV1-69*06  186  ..AG...............................A.......................................A..............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  D  L  E  W  E  L  L  E  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4139   271  CGTGTATTACTGTGCGAGAGATCTCGAGTGGGAGCTACTTGAGGCATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  96.9% (282/291)  IGHV1-69*06  276  .....................--------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                       
D  100.0% (13/13)   IGHD1-26*01  6    --------------------------.............--------------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     6    ----------------------------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_180057

Length=311
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           296     2e-82
IGHJ3*01                                                                                              71.8    7e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	N/A	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	N/A	N/A	GAAC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGAACTTTGATGAC	VRNFDD	238	255	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	46	5	0	90.2
CDR2-IMGT	100	123	24	17	7	0	70.8
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	4	1	0	80
Total	N/A	N/A	229	209	20	0	91.3


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  S  F  S  S  F  E  M  N  W  V  R  Q  A  P  G  K  G  L  Q  W  V  S  Y  I  
                    Query_4140   14   GTGCAGCCTCTGGATTCAGCTTCAGTAGTTTTGAGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTACAATGGGTCTCATATATTG  103
V  91.3% (209/229)  IGHV3-48*03  65   ..................C...........A...A...................................GG.G.....T.....C...A  154
                                         A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      G  E  S  G  T  P  I  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  K  K  S  L  Y  L  
                    Query_4140   104  GTGAAAGTGGCACTCCCATATACTACGCAGACTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAAGTCACTGTATCTGC  193
V  91.3% (209/229)  IGHV3-48*03  155  ..AGT.....T.G.A.......................A.....................................C.............  244
                                      S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----CDR3-IMGT--->                            
                                      Q  M  N  T  L  R  A  E  D  T  A  I  Y  Y  C  V  R  N  F  D  D  W  G  Q  G  T  M  V  T  V  
                    Query_4140   194  AAATGAACACCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGTGAGGAACTTTGATGACTGGGGCCAGGGGACAATGGTCACCGTCT  283
V  91.3% (209/229)  IGHV3-48*03  245  .........G......................G............C...-----------------------------------------  293
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
J  95.3% (41/43)    IGHJ3*01     8    -----------------------------------------------------.......T.........A...................  44

                                            
                                      S  S  
                    Query_4140   284  CTTCAG  289
J  95.3% (41/43)    IGHJ3*01     45   ......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 29987844


Query= Query_180055

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-10*01                                                                                           10.3    118  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACA	GGGGA	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACAGGGGATACTACGGTATGGACGTC	ARDDRGYYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_4141   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTATTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   .....................................................C.A.....G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  H  Y  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S 
                    Query_4141   91   CTGGAGTGGATTGGGAACATCCATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ...............T.....T...................C.................G........T.....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  E  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  D  D  R  G  Y  Y  G 
                    Query_4141   181  AAGAACCAGTTCTCCCTGGAGCTGACCTCTATGACAGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGATGACAGGGGATACTACGGT  270
V  94.4% (237/251)  IGHV4-31*03  229  ..................A......G....G....T.................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------------.....---------  20
J  96.0% (48/50)    IGHJ6*02     12   ---------------------------------------------------------------------------------.........  20

                                      -------->                                
                                       M  D  V  W  G  Q  G  I  T  V  T  V  S  S
                    Query_4141   271  ATGGACGTCTGGGGCCAAGGGATTACGGTCACCGTCTCCTC  311
J  96.0% (48/50)    IGHJ6*02     21   ......................CC.................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_180054

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           285     4e-79
IGHD3-16*01                                                                                           12.2    32   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGG	TGGGGG	GGCCCCGGTAT	TACGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGGTGGGGGGGCCCCGGTATTACGCTATGGACGTC	AREGVGGPRYYAMDV	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	213	31	0	87.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  A  S  M  S  D  F  Y  W  S  W  L  R  Q  P  P  G  K  A  L  E  
                    Query_4142   4    CCCTGAGACTCTCCTGTTCTGTCTCTGGTGCTTCCATGAGTGACTTCTACTGGAGTTGGCTCCGGCAGCCCCCAGGGAAGGCACTGGAGT  93
V  87.3% (213/244)  IGHV4-59*01  50   .....TCC...A....CA............GC.....C...AGT.A.........C...A.....................G........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  T  G  S  T  N  H  N  P  S  L  R  N  R  V  T  I  S  V  D  R  S  K  N  
                    Query_4142   94   GGATTGGGTACATCTATTACACTGGGAGTACCAACCACAATCCCTCCCTCAGGAATCGAGTCACCATTTCAGTAGACAGGTCCAAGAACC  183
V  87.3% (213/244)  IGHV4-59*01  140  ..........T..........G......C......T....C..........A..G............A..........C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  E  G  V  G  G  P  R  Y  Y  
                    Query_4142   184  AGTTCTCCCTGAAGTTGACTTCTGTGACCGCTGCGGACACGGCCATATATTATTGTGCGAGAGAGGGGGTGGGGGGGCCCCGGTATTACG  273
V  87.3% (213/244)  IGHV4-59*01  230  ..............C...GC........................G.G.....C...........--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD3-16*01  17   ---------------------------------------------------------------------......---------------  22
J  97.9% (47/48)    IGHJ6*02     15   --------------------------------------------------------------------------------------....  18

                                      ---------->                                 
                                      A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4142   274  CTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  97.9% (47/48)    IGHJ6*02     19   G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_69238

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           338     5e-95
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	230	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_4143   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.3% (230/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4143   91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCC  180
V  94.3% (230/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C.................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_4143   181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  94.3% (230/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4143   271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_265387

Length=414
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD2-21*02                                                                                           52.6    3e-11 
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GATTAGGGGTG	GCATATTGTGGTGGTGACTGCTATTCC	GACCC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTAGGGGTGGCATATTGTGGTGGTGACTGCTATTCCGACCCCTACGATTACTACGGTTTGGACGTC	ARRLGVAYCGGDCYSDPYDYYGLDV	284	358	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  L  S  C  Q  A  S  G  Y  T  F  N  N  Y
                    Query_4144   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAGACTCTCCTGTCAGGCTTCTGGATACACCTTCAACAATTA  90
V  93.4% (271/290)  IGHV5-51*01  6    ..............................A...................AGA........A...G...........G...T.C..GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  T  I  Y  P  G  D  S  D  T  G  Y  S  P
                    Query_4144   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGACCATCTATCCTGGTGACTCTGATACCGGATACAGCCC  180
V  93.4% (271/290)  IGHV5-51*01  96   .....................................................T.........................A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  V  H  L  Q  W  S  S  L  G  A  S  D  T  A
                    Query_4144   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGTCCACCTGCAGTGGAGCAGCCTGGGGGCCTCGGACACCGC  270
V  93.4% (271/290)  IGHV5-51*01  186  ............................................G.....C.T....................AA...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------------------CDR3-IMGT-------------------------------->  
                                        I  Y  Y  C  A  R  R  L  G  V  A  Y  C  G  G  D  C  Y  S  D  P  Y  D  Y  Y  G  L  D  V  W
                    Query_4144   271  CATATATTACTGTGCGAGACGATTAGGGGTGGCATATTGTGGTGGTGACTGCTATTCCGACCCCTACGATTACTACGGTTTGGACGTCTG  360
V  93.4% (271/290)  IGHV5-51*01  276  ...G................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (27/27)   IGHD2-21*02  2    -------------------------------...........................--------------------------------  28
J  93.1% (54/58)    IGHJ6*02     5    ---------------------------------------------------------------....T.C.........A..........  31

                                                                     
                                        G  Q  G  T  T  V  A  V  S  S 
                    Query_4144   361  GGGCCAAGGGACCACGGTCGCCGTCTCCTCA  391
J  93.1% (54/58)    IGHJ6*02     32   ...................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40604112


Query= Query_324414

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           335     4e-94
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCATAGGGGTG	ATTACGATTTTTGGAGGGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCATAGGGGTGATTACGATTTTTGGAGGGGTTATTGACTACTTCGACTAC	ARSIGVITIFGGVIDYFDY	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	228	14	0	94.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_4145   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  94.2% (228/242)  IGHV4-59*08  50   .....TCC...A....C.........................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  V  Y  Y  S  G  S  T  K  Y  N  P  S  L  Q  S  R  V  T  I  S  L  D  T  S  K  N  
                    Query_4145   94   GGATTGGTTATGTGTATTACAGTGGGAGCACCAAGTATAACCCCTCGCTCCAGAGTCGAGTCACCATATCACTAGACACCTCCAAGAACC  183
V  94.2% (228/242)  IGHV4-59*08  140  .......G...A.C....................C..C........C...A....................G.......G..........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  I  G  V  I  T  I  F  G  
                    Query_4145   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGATCCATAGGGGTGATTACGATTTTTGGAG  273
V  94.2% (228/242)  IGHV4-59*08  230  ..............................................................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  95.8% (23/24)    IGHD3-3*01   3    --------------------------------------------------------------------------................  18

                                      ---------------------->                                  
                                      G  V  I  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4145   274  GGGTTATTGACTACTTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  95.8% (23/24)    IGHD3-3*01   19   T.......-------------------------------------------------  26
J  97.9% (47/48)    IGHJ4*02     1    ---------.......T........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_302329

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*02                                                                                           397     8e-113
IGHD3-10*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGTTCTC	TGGTTCGGGGAGTTAT	G	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGTTCTCTGGTTCGGGGAGTTATGACTTTGAATAC	ARDRFSGSGSYDFEY	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	70	5	0	93.3
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	104	10	0	91.2
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	275	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  E  Q  P  G  A  S  V  T  V  S  C  K  A  S  G  Y  T  F  N 
                    Query_4146   4    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGGAGCAGCCTGGGGCCTCAGTGACGGTTTCCTGCAAGGCATCTGGATACACGTTCAAC  93
V  92.9% (275/296)  IGHV1-46*02  1    .....G.................G.........A..A..................A...........................C......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  N 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       I  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  N  G  G  Y  T  T  Y 
                    Query_4146   94   ATCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAATAATCAACCCTAATGGTGGTTACACAACCTAC  183
V  92.9% (275/296)  IGHV1-46*02  91   .G.......................................G............................G.......AG.....G....  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  A  R  D  T  S  T  S  T  V  Y  L  E  L  S  S  L  R  S  E  D 
                    Query_4146   184  GCACAGAAGTTTCAGGGCAGAGTCACCATGGCTAGGGACACGTCCACGAGCACAGTGTATCTGGAATTGAGCAGCCTGAGATCTGAGGAT  273
V  92.9% (275/296)  IGHV1-46*02  181  ...........C..................A.C.......................C..CA....GC......................C  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  R  D  R  F  S  G  S  G  S  Y  D  F  E  Y  W  G  Q  G  T  L  V  T  V 
                    Query_4146   274  ACGGCCGTGTATTACTGTGCGAGAGATCGGTTCTCTGGTTCGGGGAGTTATGACTTTGAATACTGGGGCCAGGGAACCCTGGTCACCGTC  363
V  92.9% (275/296)  IGHV1-46*02  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (16/16)   IGHD3-10*01  10   -----------------------------------................---------------------------------------  25
J  97.8% (44/45)    IGHJ4*02     4    ----------------------------------------------------.......C..............................  41

                                             
                                       S  S  
                    Query_4146   364  TCCTCAG  370
J  97.8% (44/45)    IGHJ4*02     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_302325

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	247	223	21	3	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4147   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGGGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  87
V  90.3% (223/247)  IGHV4-4*02   49   ..................GC.........T...TCC......A..AG........GG.......................G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  K 
                    Query_4147   88   GAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCAAG  177
V  90.3% (223/247)  IGHV4-4*02   139  .......................T......A................................G.......A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G  W 
                    Query_4147   178  AATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGTGGGTAGCAGTGGCTGG  267
V  90.3% (223/247)  IGHV4-4*02   229  ..CC.GT..........G....GC..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-19*01  6    -----------------------------------------------------------------------------.............  18

                                      -------->                                
                                       L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_4147   268  CTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  308
J  95.0% (38/40)    IGHJ4*02     7    -......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_302324

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            315     5e-88
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCTCTCCTAGAAGTGACTGGGCGAGGG	GGGGGAGT	N/A	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCTCTCCTAGAAGTGACTGGGCGAGGGGGGGGAGTTGGTTCGACCCC	AASPRSDWARGGSWFDP	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  G  I  T  Y  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4148   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCGGCATTACTTACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.4% (222/243)  IGHV4-4*02   49   .......................................A...G..G.A.........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  A  Y  Y  S  G  S  N  N  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  K  S  K 
                    Query_4148   91   GAGTGGATTGGGGAAGCCTATTATAGTGGGAGCAACAACTACAACCCGTCCCTCAAAAGTCGAGTCGCCATATCAGTGGACAAGTCCAAG  180
V  91.4% (222/243)  IGHV4-4*02   139  ...............AT....C............C.....................G.........A..........A............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  E  F  S  L  R  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  A  S  P  R  S  D  W  A  R 
                    Query_4148   181  AACGAGTTTTCCCTGAGGTTAACGTCTATGACCGCCGCGGACACGGCCGTATATTATTGTGCGGCCTCTCCTAGAAGTGACTGGGCGAGG  270
V  91.4% (222/243)  IGHV4-4*02   229  ...C....C.......A.C.G.GC...G......................G.....C......---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            

                                      -------------------->                                  
                                       G  G  S  W  F  D  P  W  G  Q  G  I  L  V  I  V  S  S  
                    Query_4148   271  GGGGGGAGTTGGTTCGACCCCTGGGGCCAGGGAATCCTGGTCATCGTCTCCTCAG  325
D  100.0% (8/8)     IGHD3-16*01  18   -........----------------------------------------------  25
J  95.7% (44/46)    IGHJ5*02     6    ---------.........................C........C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_302327

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD5-12*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTC	TATAGTGGCTAC	CAGAAAGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCTATAGTGGCTACCAGAAAGTTTTTGACTCT	ARFYSGYQKVFDS	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  P  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  K  F  S  S  Y
                    Query_4149   1    GCAGCTGGTGCAGTCTGGACCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAAGTTTTCCAGTTA  90
V  92.4% (267/289)  IGHV5-51*01  6    ...................G.........................................A...G...........GC...A....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  V  A  I  I  Y  P  A  D  S  T  T  R  Y  S  P
                    Query_4149   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGGTGGCAATCATCTATCCTGCTGACTCTACTACCCGATACAGTCC  180
V  92.4% (267/289)  IGHV5-51*01  96   ..............................................A...GG.............G.......GA....A.......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  L  Q  G  Q  V  T  I  S  A  D  K  S  T  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4149   181  GTCCCTCCAAGGGCAGGTCACCATCTCAGCCGACAAGTCCACCAGTACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  92.4% (267/289)  IGHV5-51*01  186  ....T.......C............................T...C.......A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        T  F  Y  C  A  R  F  Y  S  G  Y  Q  K  V  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4149   271  CACGTTTTACTGTGCGAGATTCTATAGTGGCTACCAGAAAGTTTTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  92.4% (267/289)  IGHV5-51*01  276  ..T..A.............-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD5-12*01  6    ----------------------............----------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------.......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_302326

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           304     9e-85
IGHD3-10*01                                                                                           43.0    2e-08
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	230	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	21	3	0	87.5
FR3-IMGT	116	229	114	107	7	0	93.9
CDR3-IMGT (germline)	230	236	7	7	0	0	100
Total	N/A	N/A	224	209	15	0	93.3


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  I  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_4150   13   GTCTGGATTCATCTTCAGCAGCTATGCCATGCACTGGGTCCGCCAGGCCCCAGGCAAGGGGCTGGAGTGGGTGGCTGTTATTTGGTATGA  102
V  93.3% (209/224)  IGHV3-33*01  72   ...........C......T.......G.....................T..........................A.....A........  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  K  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  V  S  L  L  M  S
                    Query_4150   103  TGGAAGTAAAAAGTACTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGATTCCAAGAACACGGTGTCTCTGCTAATGAG  192
V  93.3% (209/224)  IGHV3-33*01  162  .........T..A.......C.....................................A..............C...A.....A.....A  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------CDR3-IMGT----------------->        
                                        S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  H  S  Y  G  S  G  S  Y  Y  A  Q  D  W  G  Q
                    Query_4150   193  CAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGACTGGGGCCA  282
V  93.3% (209/224)  IGHV3-33*01  252  ...........C................................----------------------------------------------  295
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (22/22)   IGHD3-10*01  7    ---------------------------------------------------......................-----------------  28
J  100.0% (36/36)   IGHJ4*02     13   --------------------------------------------------------------------------------..........  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_4150   283  GGGAACCCTGGTCACCGTCTCCTCAG  308
J  100.0% (36/36)   IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_30911

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            285     4e-79
IGHD2-8*02                                                                                            10.3    123  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	N/A	CTGGT	CCCGTTCTCCTCCCCG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAAAGATACTGGTCCCGTTCTCCTCCCCGACAACTGGTTCGACCGT	VKDTGPVLLPDNWFDR	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	252	10	8	2	0	80
Total	N/A	N/A	252	217	35	0	86.1


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  V  A  S  G  F  N  F  E  N  T  A  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_4151  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCAACTTTGAGAACACTGCCATGTACTGGGTCCGGCAAGCCCCGGGAAAGGGCCTGG  90
V  86.1% (217/252)  IGHV3-9*01  47   .....................C..............C......TG.TTA.......C................T..A..G..........  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  S  I  S  S  K  S  G  H  I  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_4151  91   AGTGGGTCTCAAGTATAAGTTCGAAAAGTGGTCACATATTTTATGCGGATTCTGTGAAGGGCCGATTCACCATTTCCAGAGACAACACCA  180
V  86.1% (217/252)  IGHV3-9*01  137  ...........G....T....G...T......AG....GGC........C.......................C............G...  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                     K  N  C  L  Y  L  Q  M  S  S  L  K  T  D  D  T  A  F  Y  Y  C  V  K  D  T  G  P  V  L  L  
                    Query_4151  181  AGAACTGCCTCTATCTTCAAATGAGCAGTCTGAAGACTGACGACACGGCCTTCTATTATTGTGTCAAAGATACTGGTCCCGTTCTCCTCC  270
V  86.1% (217/252)  IGHV3-9*01  227  ......C...G.....G.......A........GAG....G...........G.....C....CA.......------------------  298
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (5/5)     IGHD2-8*02  12   ------------------------------------------------------------------------.....-------------  16

                                     T------------------>                                  
                                     P  D  N  W  F  D  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4151  271  CCGACAACTGGTTCGACCGTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  96.1% (49/51)    IGHJ5*02    1    ---...............CC..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_302323

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            332     4e-93
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-22*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTTTG	ACTATGATAGTCGTGGCTTTTAC	AGACGTTCTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTTTGACTATGATAGTCGTGGCTTTTACAGACGTTCTAACTACTTTGACTTC	EGL*L**SWLLQTF*LL*L	242	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	106	52	51	0	1	98.1
CDR2-IMGT	107	127	21	21	0	0	100
FR3-IMGT	128	241	114	105	9	0	92.1
CDR3-IMGT (germline)	242	246	5	5	0	0	100
Total	N/A	N/A	246	231	14	1	93.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><---------------------FR2-IMGT------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  R  E  G  A 
                    Query_4152   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTACTAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCAGGGAAGGGGCT  90
V  93.9% (231/246)  IGHV4-4*01   49   ..................G.....................GC.G......C.........................-.............  137
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P   P  G  K  G  L

                                      ---------------><-----CDR2-IMGT-----><----------------------------------------------------
                                       G  V  D  W  G  N  L  S  *  W  E  H  P  V  Q  P  V  T  Q  E  S  S  H  D  I  S  R  Q  V  Q 
                    Query_4152   91   GGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCCAGTACAACCCGTCACTCAAGAGTCGAGTCACGATATCAGTAGACAAGTCCAA  180
V  93.9% (231/246)  IGHV4-4*01   138  .....................................A.C...........C.................C....................  227
                                        E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K

                                      FR3-IMGT----------------------------------------------------><-------------------------CDR
                                       E  P  D  L  P  E  V  E  F  C  D  R  R  G  H  G  R  V  F  L  C  E  G  L  *  L  *  *  S  W 
                    Query_4152   181  GAACCAGATCTCCCTGAGGTTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGGCTTTGACTATGATAGTCGTGG  270
V  93.9% (231/246)  IGHV4-4*01   228  .......T.........A.C....C...............................G.........------------------------  293
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                           
D  87.0% (20/23)    IGHD3-22*01  6    --------------------------------------------------------------------------...........A....  21

                                      3-IMGT------------------------>                                  
                                       L  L  Q  T  F  *  L  L  *  L  L  G  P  G  N  P  G  R  C  L  L   
                    Query_4152   271  CTTTTACAGACGTTCTAACTACTTTGACTTCTGGGGCCGGGGAACCCTGGTCGCTGTCTCCTCAG  335
D  87.0% (20/23)    IGHD3-22*01  22   T.A....----------------------------------------------------------  28
J  91.7% (44/48)    IGHJ4*02     1    -----------------............A........A.............A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_302322

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  H  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4153   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACCACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  92.1% (223/242)  IGHV4-59*01  49   ..........................................AG....T.........................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  K  S  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_4153   91   TGGATTGGATATATCTTCTACAGTGGCAAATCCAAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACATCCAAGAAG  180
V  92.1% (223/242)  IGHV4-59*01  139  ........G.......AT........G.GCA....C............................................G........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  L  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_4153   181  CAGTTGTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  92.1% (223/242)  IGHV4-59*01  229  .....C.......A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4153   271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_35858

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           313     1e-87
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGACTAG	TGGAACGAC	TCTTGTGT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGACTAGTGGAACGACTCTTGTGTACTGGTTCGACCCC	ARTSGTTLVYWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	220	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  N  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  Q  L  E 
                    Query_4154   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAATACCTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAACAACTGGAG  90
V  91.7% (220/240)  IGHV4-59*08  49   ..................A.....................G..GT...................................GGG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  T  T  Y  S  P  S  L  K  S  R  V  T  M  S  I  D  T  S  K  N 
                    Query_4154   91   TGGATTGGTTATATCTCTTACAGTGGGAGCACCACTTATAGCCCCTCCCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCCAAGAAC  180
V  91.7% (220/240)  IGHV4-59*08  139  ........G.......A.................AC..C.A...........................A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  T  S  G  T  T  L  V  Y  W 
                    Query_4154   181  CAGTTCTCCCTGAGGCTGACGTCTGTGACCGCCGCAGACACGGCCATTTATTACTGTGCGCGGACTAGTGGAACGACTCTTGTGTACTGG  270
V  91.7% (220/240)  IGHV4-59*08  229  .............A.....GC........................G.G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD1-1*01   9    --------------------------------------------------------------------.........-------------  17
J  95.8% (46/48)    IGHJ5*02     4    -------------------------------------------------------------------------------------.....  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  I  L  V  A  V  S  S  
                    Query_4154   271  TTCGACCCCTGGGGCCAGGGAATCCTGGTCGCCGTCTCCTCAG  313
J  95.8% (46/48)    IGHJ5*02     9    ......................C.......A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_30917

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD2-2*02                                                                                            23.8    0.011
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGATC	ATTGTAGTGGTTTCAGATGCTATA	ATACAGG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGATCATTGTAGTGGTTTCAGATGCTATAATACAGGCAACTGGTTCGACCCC	AREDHCSGFRCYNTGNWFDP	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  E  W  T  W  V  R  Q  P  P  G  E  G  L  E 
                    Query_4155   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCAGTAATTACGAGTGGACCTGGGTCCGGCAGCCCCCAGGGGAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   .............................T.............G....T.C....G....A.................A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_4155   91   TGGATTGGCTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGGGTCACCATTTCACTAGACACGTCCAAGAAC  180
V  93.1% (228/245)  IGHV4-59*01  139  ........G...A..T...........................................A........A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       L  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  D  H  C  S  G  F  R  C 
                    Query_4155   181  CTGTTCTCCCTGAAGCTAAACTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGAGGATCATTGTAGTGGTTTCAGATGC  270
V  93.1% (228/245)  IGHV4-59*01  229  .A...............G.G...........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (20/24)    IGHD2-2*02   6    ----------------------------------------------------------------------........A..AC...C...  25

                                      GT------------------------>                                  
                                       Y  N  T  G  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4155   271  TATAATACAGGCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  331
D  83.3% (20/24)    IGHD2-2*02   26   ....---------------------------------------------------------  29
J  98.0% (49/50)    IGHJ5*02     2    -----------.................................G................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_20328

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           413     2e-117
IGHD6-25*01                                                                                           12.2    36    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TT	AGCGGC	GAAGGTAACCTTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTAGCGGCGAAGGTAACCTTATTGACTAC	AKLSGEGNLIDY	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	297	7	6	1	0	85.7
Total	N/A	N/A	294	279	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_4156   4    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCA  93
V  94.9% (279/294)  IGHV5-51*01  2    ....G.....G...........................................................T...................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      R  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  Y  D  V  R  Y  
                    Query_4156   94   GGTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTATGATGTGAGATACA  183
V  94.9% (279/294)  IGHV5-51*01  92   .C.........................................................................C....ACC.......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  P  S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_4156   184  GACCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGCACCGCCTTTTTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  94.9% (279/294)  IGHV5-51*01  182  .C.....................................A.................ACC..............................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  I  Y  Y  C  A  K  L  S  G  E  G  N  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4156   274  CCGCCATTTATTACTGTGCGAAACTTAGCGGCGAAGGTAACCTTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  94.9% (279/294)  IGHV5-51*01  272  .......G.............G..---------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD6-25*01  10   --------------------------......-------------------------------------------------------  15
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_305809

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           294     6e-82
IGHD3-10*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGG	CCGAAGGTACCT	TGGGTCGGGGAG	ATTTATACCGTTTTCG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCGAAGGTACCTTGGGTCGGGGAGATTTATACCGTTTTCGGACTAT	ARGRRYLGSGRFIPFSDY	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	216	28	0	88.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  E  V  Y  G  G  S  F  N  N  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_4157   4    CCCTGAGACTCTCCTGCGAAGTCTATGGTGGGTCCTTCAATAATTACTTCTGGAACTGGATCCGCCAGCCCCCAGGAAAGGGTCTGGAGT  93
V  88.5% (216/244)  IGHV4-34*01  50   .....TCC...A......CT...................G.GG.....A.....G.....................G.....G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  V  S  H  S  R  N  T  N  Y  N  L  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N  
                    Query_4157   94   GGATTGGGGAAGTCAGTCATAGTCGCAACACCAACTACAACCTGTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAACC  183
V  88.5% (216/244)  IGHV4-34*01  140  ...........A...A.......G.A.G..............C............................G..................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  Y  S  L  N  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  Y  L  G  S  G  R  
                    Query_4157   184  AGTACTCCCTGAACCTGGCTTCTGTGACCGCCGCGGACACGGCTGTCTACTACTGTGCGAGGGGCCGAAGGTACCTTGGGTCGGGGAGAT  273
V  88.5% (216/244)  IGHV4-34*01  230  ...T.........G...AGC..........................G..T...........A..--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  91.7% (11/12)    IGHD3-10*01  10   ----------------------------------------------------------------------------...T........--  21

                                      ------------------->                                  
                                      F  I  P  F  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4157   274  TTATACCGTTTTCGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  97.5% (39/40)    IGHJ4*02     9    --------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_305808

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4158   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4158   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_4158   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4158   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_187652

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     3e-91
IGHD6-13*01                                                                                           21.8    0.041
IGHJ2*01                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GACGAG	ATAGCGGCAGCTGG	CTTC	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAGATAGCGGCAGCTGGCTTCGGTACTTCGATCTC	ARRDSGSWLRYFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  G  L  S  C  A  A  S  G  F  T  F  N  T  Y  A  M  N  W  V  R  H  T  P  G  K  G  L  
                    Query_4159   1    GGTCCCTGGGACTCTCCTGTGCAGCCTCTGGATTCACTTTTAATACCTATGCCATGAACTGGGTCCGCCACACTCCAGGGAAGGGACTGG  90
V  92.3% (227/246)  IGHV3-23*01  47   ........A............................C....GC.G...........G............GG.............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  S  I  S  D  S  G  S  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4159   91   ATTGGGTCTCATCTATTAGTGATAGTGGTAGTGGCACATACTACGCAGACTCCGTGAAGGGCCGATTTACCATCTCCAGAGACAATTCCA  180
V  92.3% (227/246)  IGHV3-23*01  137  .G.........G.........G.......G..A...............................G..C......................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  R  D  S  G  S  W  L  
                    Query_4159   181  AGAACACCCTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTCTATTACTGTGCGAGACGAGATAGCGGCAGCTGGCTTC  270
V  92.3% (227/246)  IGHV3-23*01  227  .......G................................G...........A.............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD6-13*01  5    ------------------------------------------------------------------------.....A........----  18

                                      ------------->                                  
                                      R  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4159   271  GGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  318
J  100.0% (48/48)   IGHJ2*01     6    ................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_305801

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD2-21*01                                                                                           10.3    123  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TCTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTCTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFLQERVYYFDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_4160   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTTCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  95.1% (235/247)  IGHV4-31*03  50   .....TCC...A..................G..C......C.................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  E  S  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_4160   94   TGGAGTGGATTGGGTACATCTATTACAGTGAGAGCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCTA  183
V  95.1% (235/247)  IGHV4-31*03  140  ..............................G................C......................C........A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  L  Q  E  
                    Query_4160   184  AGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTTCTCTATTTCTCCAAGAAA  273
V  95.1% (235/247)  IGHV4-31*03  230  .........................C.........................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  22   --------------------------------------------------------------------------.....-----------  26

                                      T------------------>                                  
                                      R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4160   274  GAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (48/48)   IGHJ4*02     1    ------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_305800

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           366     2e-103
IGHD1-7*01                                                                                            16.1    2.5   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ACTGGAAATAC	ATAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTC	ARDRTGNTYYGLDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	16	8	0	66.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	262	28	0	90.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  N  D 
                    Query_4161   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTATACTTTCAGTAATGAT  91
V  90.3% (262/290)  IGHV1-18*01  7    ...............................A.................................T........C..C..T.CC.GCT..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  S  F  N  G  N  T  I  Y  A  Q 
                    Query_4161   92   GGTATTAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCTCTTTCAATGGAAACACAATCTACGCACAG  181
V  90.3% (262/290)  IGHV1-18*01  97   .....C............................................A.........G...A......T.......A...T......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  M  T  T  E  T  S  T  T  T  A  Y  M  E  L  R  S  L  T  Y  D  D  T  A 
                    Query_4161   182  AATTTACAGGGCAGAGTTACCATGACCACAGAAACTTCTACGACCACAGCCTACATGGAGCTGAGGAGCCTGACATATGACGACACGGCC  271
V  90.3% (262/290)  IGHV1-18*01  187  ..GC.C...........C..............C..A..C....G.............................G..C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                 
                                       V  Y  F  C  A  R  D  R  T  G  N  T  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4161   272  GTGTATTTCTGTGCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  358
V  90.3% (262/290)  IGHV1-18*01  277  .......A............-------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                      
D  90.9% (10/11)    IGHD1-7*01   7    ------------------------.......C...----------------------------------------------------  17
J  95.8% (46/48)    IGHJ6*02     15   ---------------------------------------......A....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_305802

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           332     4e-93
IGHD2-15*01                                                                                           12.2    33   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTAGA	CATGGCCCCGACTTCGATGGAC	GGTGGT	N/A	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGACATGGCCCCGACTTCGATGGACGGTGGTACTTCTATGACTAC	TRHGPDFDGRWYFYDY	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	105	9	0	92.1
CDR3-IMGT (germline)	249	254	6	6	0	0	100
Total	N/A	N/A	254	233	21	0	91.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  F  G  D  F  A  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_4162   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCATCTTTGGTGATTTTGCTATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.7% (233/254)  IGHV3-49*04  47   .........................T..........C...........A.......AG................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  L  I  R  S  K  A  Y  G  E  T  A  D  Y  A  A  S  V  N  G  R  F  S  I  S  R  D  
                    Query_4162   91   AGTGGGTGGGACTCATCAGAAGCAAGGCTTATGGTGAGACAGCAGACTACGCCGCGTCTGTGAATGGCAGATTCAGCATCTCAAGAGATG  180
V  91.7% (233/254)  IGHV3-49*04  137  .......A..TT....T........A..........G....A....A.................A..........C..............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  K  T  I  A  Y  L  H  M  N  S  L  N  T  E  D  T  A  V  Y  Y  C  T  R  H  G  P  D  F  
                    Query_4162   181  ACTCCAAAACCATCGCCTATCTGCACATGAACAGCCTGAACACCGAGGACACAGCCGTCTATTATTGTACTAGACATGGCCCCGACTTCG  270
V  91.7% (233/254)  IGHV3-49*04  227  .T.......G...............A..............A.................G.....C.........----------------  300
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 

                                      R3-IMGT------------------>                                  
                                      D  G  R  W  Y  F  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4162   271  ATGGACGGTGGTACTTCTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (6/6)     IGHD2-15*01  14   ------......------------------------------------------------  19
J  95.8% (46/48)    IGHJ4*02     1    ------------...A..T.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_305804

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           427     9e-122
IGHD2-15*01                                                                                           10.3    135   
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AT	TATTG	AGTGATCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAATTATTGAGTGATCGTGCTTTTGATATC	ARQLLSDRAFDI	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	70	4	0	94.6
CDR1-IMGT	78	101	24	24	0	0	100
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	112	2	0	98.2
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	295	284	11	0	96.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  D  S  G  Y  S  F  T  
                    Query_4163   4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGATTCTGGATACAGCTTTACCA  93
V  96.3% (284/295)  IGHV5-51*01  2    ..G...............................A..............................A...G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  I  I  F  P  A  D  S  D  A  R  Y  
                    Query_4163   94   GCTACTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGTTGGGGATCATCTTTCCTGCTGACTCTGATGCCAGATACA  183
V  96.3% (284/295)  IGHV5-51*01  92   .............C....................................A............A.....G..........A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_4163   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  96.3% (284/295)  IGHV5-51*01  182  .................................C.............A..........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  M  Y  Y  C  A  R  Q  L  L  S  D  R  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4163   274  CCGCCATGTATTACTGTGCGAGACAATTATTGAGTGATCGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  360
V  96.3% (284/295)  IGHV5-51*01  272  .........................--------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                 
D  100.0% (5/5)     IGHD2-15*01  5    ---------------------------.....-------------------------------------------------------  9
J  100.0% (47/47)   IGHJ3*02     4    ----------------------------------------...............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_305807

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            350     8e-99
IGHD4-4*01                                                                                            10.3    114  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCG	AGTAA	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCCGAGTAATTTTGATTAC	VRDPSNFDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  S  V  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4164  1    GGTCCCTGAGACTCTCCTGTTCAGTCTCTGGATTCACCTTTAGTAGGTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-7*03  47   ....................G...C.....................C...........C...............................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  N  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  S  S  R  D  N  A  
                    Query_4164  91   AGTGGGTGGCCAACATAAATCAAGATGGAAGTGAGAAGTACTATGTGGACTCTGTGAAGGGCCGATTCACCAGCTCCAGAGACAACGCCA  180
V  94.8% (237/250)  IGHV3-7*03  137  ...................G.................A..................................T.................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  V  R  D  P  S  N  F  D  Y  
                    Query_4164  181  AGAATTCACTCTATCTGCAAATGAATAGCCTGAGAGTCGAGGACACGGCCGTCTATTACTGTGTGAGAGATCCGAGTAATTTTGATTACT  270
V  94.8% (237/250)  IGHV3-7*03  227  ....C.....G..............C..........C...............G..........C......--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD4-4*01  8    --------------------------------------------------------------------------.....-----------  12
J  95.3% (41/43)    IGHJ4*02    6    --------------------------------------------------------------------------------.....C....  15

                                                                      
                                     W  G  Q  G  A  L  V  T  V  S  S  
                    Query_4164  271  GGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  303
J  95.3% (41/43)    IGHJ4*02    16   ...........A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_305806

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           262     4e-72
IGHD2-15*01                                                                                           10.3    119  
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	ACATAATCCT	GCTGC	CAGAGGGGC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGACATAATCCTGCTGCCAGAGGGGCCAACTGGTTCGACCTC	ARGHNPAARGANWFDL	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	48	24	19	2	3	79.2
FR2-IMGT	49	99	51	45	6	0	88.2
CDR2-IMGT	100	120	21	18	3	0	85.7
FR3-IMGT	121	234	114	95	19	0	83.3
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	245	208	34	3	84.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  D  F  Y  G  G  S  F     D  S  Y  W  N  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_4165   1    ACCCTGTCCCTCACCTGCGATTTTTATGGTGGGTCCTT---TGATTCCTACTGGAATTGGATCCGCCAGACTCCAGGGAAGGGGCTGGAG  87
V  84.9% (208/245)  IGHV4-34*01  49   ...................C.G.C..............CAG..G..A........GC............C.C..................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  N  R  A  G  S  T  N  F  N  P  S  L  E  S  R  L  T  I  S  V  D  T  S  T  K 
                    Query_4165   88   TGGATTGCAGAAATCAATCGTGCTGGAAGCACCAACTTCAATCCGTCCCTCGAGAGTCGACTCACCATTTCAGTGGACACGTCCACGAAG  177
V  84.9% (208/245)  IGHV4-34*01  139  .......GG..........A.AG..............A...C.........A........G.......A.....A..........A...C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       R  F  S  L  R  L  N  S  L  N  A  A  D  T  G  V  Y  Y  C  A  R  G  H  N  P  A  A  R  G  A 
                    Query_4165   178  CGATTCTCCCTGAGGCTAAATTCTCTTAACGCCGCAGACACGGGTGTGTATTACTGTGCGCGAGGACATAATCCTGCTGCCAGAGGGGCC  267
V  84.9% (208/245)  IGHV4-34*01  229  .AG..........A...G.GC...G.G.C......G.......C................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (5/5)     IGHD2-15*01  21   ---------------------------------------------------------------------------.....----------  25
J  96.0% (48/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  D  L  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_4165   268  AACTGGTTCGACCTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  316
J  96.0% (48/50)    IGHJ5*02     3    .............C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_233160

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            339     2e-95
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAA	GGCAGGGCC	CGGTGACTAC	GGCGGGTCCA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGGCAGGGCCCGGTGACTACGGCGGGTCCAACTTTGACTGC	AKAGPGDYGGSNFDC	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  Y  D  Y  V  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4166   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTTATGATTATGTCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  93.9% (232/247)  IGHV3-9*01   47   .........................................G.........C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  Y  I  G  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  A  
                    Query_4166   91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGGTTACATAGGATATGCGGACTCTGTGAAGGGCCGATTCTCCATCTCCAGAGACAACGCCG  180
V  93.9% (232/247)  IGHV3-9*01   137  ................................AG......C...........................A....................A  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      G  N  S  L  Y  L  E  M  N  S  L  T  L  E  D  T  A  L  Y  Y  C  A  K  A  G  P  G  D  Y  G  
                    Query_4166   181  GGAACTCCCTGTATCTGGAAATGAACAGTCTGACGCTGGAAGACACGGCCTTGTATTACTGTGCAAAGGCAGGGCCCGGTGACTACGGCG  270
V  93.9% (232/247)  IGHV3-9*01   227  A................C...............GAGCT..G..........................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (10/10)   IGHD4-17*01  7    ----------------------------------------------------------------------------..........----  16

                                      ---------------->                                  
                                      G  S  N  F  D  C  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_4166   271  GGTCCAACTTTGACTGCTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  321
J  95.6% (43/45)    IGHJ4*02     4    ------.........A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_233161

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           336     1e-94
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACACA	TGTCACCAATA	ACTATGGTTCGGGGAG	GCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACATGTCACCAATAACTATGGTTCGGGGAGGCCCTTTGACGAC	ATHVTNNYGSGRPFDD	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	233	18	0	92.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  P  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_4167   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTCCTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  92.8% (233/251)  IGHV4-39*01  49   ................................................AG...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  R  G  N  T  Q  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_4167   91   CTGGAGTGGATTGGGAGTATCTATTATCGTGGGAACACCCAGTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  92.8% (233/251)  IGHV4-39*01  139  ...........................A......G....T.C................................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       G  N  Q  F  S  L  T  L  N  F  V  T  A  A  D  T  A  M  Y  Y  C  A  T  H  V  T  N  N  Y  G 
                    Query_4167   181  GGGAATCAGTTCTCCCTGACACTGAATTTTGTGACCGCCGCAGACACGGCTATGTATTACTGTGCGACACATGTCACCAATAACTATGGT  270
V  92.8% (233/251)  IGHV4-39*01  229  AA...C.............AG....GC.C......................G...............G...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (16/16)   IGHD3-10*01  6    ----------------------------------------------------------------------------------........  13

                                      GT------------------>                                  
                                       S  G  R  P  F  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4167   271  TCGGGGAGGCCCTTTGACGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  100.0% (16/16)   IGHD3-10*01  14   ........-----------------------------------------------  21
J  97.7% (43/44)    IGHJ4*02     5    -----------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_99239

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           319     2e-89
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_4168   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  91.8% (224/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_4168   91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (224/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_4168   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGTCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  91.8% (224/244)  IGHV4-59*08  229  ...............C...............C...............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_4168   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_99238

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4169   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.2% (241/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4169   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.2% (241/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  G  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_4169   181  AAGAACCAGTTCTCCCTGAAGCTGGGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.2% (241/248)  IGHV4-31*03  229  ........................A...........................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4169   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_233164

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            347     8e-98
IGHD1-1*01                                                                                            14.1    9.9  
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGC	GCGAGACGAAATGT	TGGAACG	GGGTCCTTCCAAGAGCGACCCGCCCCCTTCGGGCTACTCGTCTTCTGTGCCATATCATAGCG	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACGAAATGTTGGAACGGGGTCCTTCCAAGAGCGACCCGCCCCCTTCGGGCTACTCGTCTTCTGTGCCATATCATAGCGACTATTATGGTTTGGACGTC	ARDEMLERGPSKSDPPPSGYSSSVPYHSDYYGLDV	243	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	233	11	0	95.5


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  A  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4170  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  95.5% (233/244)  IGHV3-9*01  47   ...................................A......................................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  G  I  S  W  N  S  G  T  I  G  Y  A  D  S  V  K  G  R  F  N  I  S  R  D  N  A  
                    Query_4170  91   AATGGGTCGCAGGTATTAGTTGGAATAGTGGCACCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCAATATCTCCAGAGACAACGCCA  180
V  95.5% (233/244)  IGHV3-9*01  137  .G......T......................T.G...................................CC...................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><---------------------------
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A  R  D  E  M  L  E  R  G  
                    Query_4170  181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGAGAACTGAGGACACGGCCTTATATTACTGCGCGCGAGACGAAATGTTGGAACGGGGTC  270
V  95.5% (233/244)  IGHV3-9*01  227  ..........G........................G................G........T..--------------------------  290
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (7/7)     IGHD1-1*01  9    ------------------------------------------------------------------------------.......-----  15

                                     --------------------CDR3-IMGT----------------------------------------------->             
                                     P  S  K  S  D  P  P  P  S  G  Y  S  S  S  V  P  Y  H  S  D  Y  Y  G  L  D  V  W  G  Q  G  
                    Query_4170  271  CTTCCAAGAGCGACCCGCCCCCTTCGGGCTACTCGTCTTCTGTGCCATATCATAGCGACTATTATGGTTTGGACGTCTGGGGCCAAGGGA  360
J  94.3% (50/53)    IGHJ6*02    10   ---------------------------------------------------------....C..C...A.....................  42

                                                         
                                     T  T  V  T  V  S  S 
                    Query_4170  361  CCACGGTCACCGTCTCCTCA  380
J  94.3% (50/53)    IGHJ6*02    43   ....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_233165

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           318     6e-89
IGHD3-10*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTTGG	GGTTCGGGGAATTAT	CAGGGAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGGGGTTCGGGGAATTATCAGGGATCTACTACTACGGTATGGACGTC	ARLGFGELSGIYYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  F  T  T  Y  S  F  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4171   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCTTCACTACATATAGTTTCCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (225/247)  IGHV3-21*01  47   ...................................A......G..GC.....CA.GA.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  N  R  N  T  Y  R  N  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4171   91   AGTGGGTCTCGTCCATCAGTAATCGAAATACTTACAGAAACTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  91.1% (225/247)  IGHV3-21*01  137  ..........A.....T....G.A.T.G..G.....T.T..............G................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  R  L  G  F  G  E  L  S  
                    Query_4171   181  GGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTTCTGTGCGAGGTTGGGGTTCGGGGAATTATCAG  270
V  91.1% (225/247)  IGHV3-21*01  227  A...................................C....................A.........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------------..........G....---  25

                                      IMGT--------------------->                                 
                                      G  I  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4171   271  GGATCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  100.0% (55/55)   IGHJ6*02     8    ----.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_233166

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     3e-93
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTCCGGAG	GTGGGAGCTACT	CGTGGTCCTTTTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCGGAGGTGGGAGCTACTCGTGGTCCTTTTCCTAC	ARGSGGGSYSWSFSY	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	126	24	22	2	0	91.7
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	246	229	17	0	93.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  G  T  Y  S  L  S  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_4172   2    CCCTGTCCCTCACCTGCGCAGCCTCTGGATTCACCTTCGGTACCTATAGCTTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  93.1% (229/246)  IGHV3-21*01  50   .....AGA...T....T.....................A...G.......A...A...................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  S  I  T  S  S  S  S  Y  M  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  
                    Query_4172   92   GGGTCTCATCCATTACTAGTAGTAGTAGTTACATGAACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGA  181
V  93.1% (229/246)  IGHV3-21*01  140  ...............G..................AT......................................................  229
                                      W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><-----------------CDR3-IMGT----
                                      S  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  G  S  G  G  G  S  Y  S  
                    Query_4172   182  GCTCCCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTTCTGTGCGAGAGGGTCCGGAGGTGGGAGCTACTCGT  271
V  93.1% (229/246)  IGHV3-21*01  230  A...A....A.......................................G....A...........------------------------  295
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (12/12)   IGHD1-26*01  7    ---------------------------------------------------------------------------............---  18

                                      ------------->                                  
                                      W  S  F  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4172   272  GGTCCTTTTCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (38/38)   IGHJ4*02     11   ----------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_233167

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           361     4e-102
IGHD6-13*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCTCGCCACAGAA	AGCAGCAGCT	ATAACTTTCTC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCTCGCCACAGAAAGCAGCAGCTATAACTTTCTCCTTTGACTAC	ARVSPQKAAAITFSFDY	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	113	1	0	99.1
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	237	6	0	97.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  H  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_4173   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACCACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  97.5% (237/243)  IGHV4-59*01  50   .....TCC...A...................................T..........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_4173   94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  97.5% (237/243)  IGHV4-59*01  140  ..........................................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  P  Q  K  A  A  A  I  
                    Query_4173   184  AGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTCTCGCCACAGAAAGCAGCAGCTATAA  273
V  97.5% (237/243)  IGHV4-59*01  230  ...................C...........................................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD6-13*01  7    ----------------------------------------------------------------------------..........----  16

                                      ---------------->                                  
                                      T  F  S  F  D  Y  W  G  Q  G  A  L  V  S  V  S  S  
                    Query_4173   274  CTTTCTCCTTTGACTACTGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  324
J  95.5% (42/44)    IGHJ4*02     5    -------......................A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_99233

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           336     1e-94
IGHD2-2*01                                                                                            14.1    8.5  
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD2-2*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGGAC	CTATGCC	AACTCGCCA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGACCTATGCCAACTCGCCATACTGGTACTTCGATCTC	ASGTYANSPYWYFDL	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  D  S  I  G  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_4174   4    CCCTGAGACTCTCCTGCAGTGTCTCTGGTGACTCCATCGGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  93.5% (231/247)  IGHV4-39*02  50   .....TCC...A......C...........G.......A...................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  A  S  I  Y  Y  T  G  S  A  Y  H  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  
                    Query_4174   94   TGGAGTGGATTGCGAGTATCTATTATACTGGGAGCGCCTACCACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCCA  183
V  93.5% (231/247)  IGHV4-39*02  140  ............G..............G.......A.....T...............................A................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      N  N  H  F  S  L  Q  L  S  S  V  T  D  A  D  T  A  V  Y  Y  C  A  S  G  T  Y  A  N  S  P  
                    Query_4174   184  ACAACCACTTCTCCCTGCAGCTGAGCTCTGTGACCGACGCAGACACGGCTGTCTATTACTGTGCGAGCGGGACCTATGCCAACTCGCCAT  273
V  93.5% (231/247)  IGHV4-39*02  230  .G...............A..................C...............G..............-----------------------  296
                                      K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-2*01   25   -------------------------------------------------------------------------.......----------  31
J  100.0% (52/52)   IGHJ2*01     2    -----------------------------------------------------------------------------------------.  2

                                      ---------------->                                  
                                      Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4174   274  ACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
J  100.0% (52/52)   IGHJ2*01     3    ...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_289227

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           363     1e-102
IGHD3-3*01                                                                                            46.8    1e-09 
IGHJ5*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCCA	TATTACGATTTTTGGAGTGGTTAT	CCAGGCCTCA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGATCCATATTACGATTTTTGGAGTGGTTATCCAGGCCTCACC	TTDPYYDFWSGYPGLT	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	244	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4175   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAATGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.3% (244/256)  IGHV3-15*01  47   .......T......................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  N  K  T  D  G  G  T  A  A  Y  A  A  P  V  K  G  R  F  T  I  S  T  D  
                    Query_4175   91   AGTGGGTTGGCCGTATTAAAAATAAAACTGATGGTGGCACAGCAGCCTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAACAGATG  180
V  95.3% (244/256)  IGHV3-15*01  137  .....................GC..............G...A...A......................................G.....  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  K  N  T  V  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  D  P  Y  Y  D  
                    Query_4175   181  ATTCAAAAAACACGGTCTATTTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTATTGTACCACAGATCCATATTACGATT  270
V  95.3% (244/256)  IGHV3-15*01  227  ..............C.G...C...........................................C...........--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (24/24)   IGHD3-3*01   2    --------------------------------------------------------------------------------..........  11

                                      R3-IMGT------------------>                                  
                                      F  W  S  G  Y  P  G  L  T  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4175   271  TTTGGAGTGGTTATCCAGGCCTCACCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  330
D  100.0% (24/24)   IGHD3-3*01   12   ..............----------------------------------------------  25
J  97.2% (35/36)    IGHJ5*02     16   ------------------------...............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_289224

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           332     3e-93
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGCCTG	ATGGTTCGGGGAGCTATT	TGGAGGGGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGCCTGATGGTTCGGGGAGCTATTTGGAGGGGTTACTTTGACTAC	ARLMVRGAIWRGYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	229	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  F  S  S  S  N  F  Y  W  G  W  I  R  Q  A  P  G  K  G 
                    Query_4176   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCTTCAGCAGTAGTAACTTCTACTGGGGCTGGATCCGCCAGGCCCCAGGGAAGGGA  90
V  93.1% (229/246)  IGHV4-39*01  49   ...................C................A............GT.A......................C.............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  W  Y  S  G  R  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4176   91   CTAGAGTGGATTGGGAATATCTGGTATAGTGGGAGGACTAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  93.1% (229/246)  IGHV4-39*01  139  ..G.............G.....AT...........C..CT........C.........................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  V  R  G  A  I 
                    Query_4176   181  AAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGCGCCTGATGGTTCGGGGAGCTATT  270
V  93.1% (229/246)  IGHV4-39*01  229  .....................C...............................G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  94.4% (17/18)    IGHD3-10*01  9    ------------------------------------------------------------------------.............T....  26

                                      GT------------------>                                  
                                       W  R  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4176   271  TGGAGGGGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (46/46)   IGHJ4*02     3    ---------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_99230

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD1-26*01                                                                                           10.3    113  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCGGAAGAA	GGGAG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGGAAGAAGGGAGATTGACTAC	AGGRREIDY	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	225	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  N  H  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4177   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTAATCACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.8% (225/240)  IGHV4-59*01  49   ........................................G..G.T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  D  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_4177   91   TGGATTGGGTATCTTTATTACGATGGTGACACCAAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  93.8% (225/240)  IGHV4-59*01  139  ............A.C......AG...GAG......C......................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  G  R  R  E  I  D  Y  W  G 
                    Query_4177   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGGGCGGAAGAAGGGAGATTGACTACTGGGGC  270
V  93.8% (225/240)  IGHV4-59*01  229  ...............C...............................G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  9    ----------------------------------------------------------------------.....---------------  13
J  100.0% (42/42)   IGHJ4*02     7    ----------------------------------------------------------------------------..............  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_4177   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  100.0% (42/42)   IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_99237

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           304     9e-85
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	219	25	0	89.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E  
                    Query_4178   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAGT  93
V  89.8% (219/244)  IGHV4-59*02  50   .....TCC...A....C.............G..........AG...C.......G.............C...........G.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N  
                    Query_4178   94   GGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAACC  183
V  89.8% (219/244)  IGHV4-59*02  140  ......G....A...A.T.......G.G............C..C....................CA........................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------CDR3-IMGT--------->    
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W  
                    Query_4178   184  AGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGGG  273
V  89.8% (219/244)  IGHV4-59*02  230  ..........G.A.................................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  90.0% (45/50)    IGHJ3*02     1    ----------------------------------------------------------------------...T..T..T..........  20

                                                                    
                                      G  P  G  T  M  V  T  V  S  S  
                    Query_4178   274  GCCCAGGGACAATGGTCACCGTGTCTTCAG  303
J  90.0% (45/50)    IGHJ3*02     21   ...A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_289221

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         297     7e-83
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	GGAGTCGTAATTAT	CATGGGAATTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGAGTCGTAATTATCATGGGAATTTCTACTTCGACCAC	ARGSRNYHGNFYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	220	30	0	88


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  D  S  V  Y  Y  S  L  N  W  I  R  Q  T  P  L  K  G 
                    Query_4179     1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCATCGACAGTGTTTACTACTCCTTAAACTGGATCCGGCAGACACCACTGAAGGGC  90
V  88.0% (220/250)  IGHV4-30-2*01  49   .......................C...............AG.....G.GGT.......GG.G.............C.....GG.......  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Q  H  S  G  A  T  Y  Y  N  P  S  L  E  S  R  V  S  L  S  V  D  R  S 
                    Query_4179     91   CTGGAGTGGATTGGCTACATCCAGCATTCTGGGGCCACCTACTACAACCCGTCCCTCGAGAGTCGGGTCTCCCTTTCAGTAGACCGGTCC  180
V  88.0% (220/250)  IGHV4-30-2*01  139  ..............G......T.T...AG....AG......................A.......A...A..A.A.........A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  S  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  R  N  Y  H  G 
                    Query_4179     181  AAGAGCCAGTTCTCCCTGAGGCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGAGGGAGTCGTAATTATCATGGG  270
V  88.0% (220/250)  IGHV4-30-2*01  229  ....A..............A.....G...........................G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  85.7% (12/14)    IGHD3-3*01     15   ----------------------------------------------------------------------.....G..T.....------  28

                                        ----------------->                                  
                                         N  F  Y  F  D  H  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_4179     271  AATTTCTACTTCGACCACTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTCAG  322
J  91.5% (43/47)    IGHJ4*02       2    -----......T...T...............C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_55209

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           271     7e-75
IGHD3-10*01                                                                                           14.1    8.9  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	CTCCGCCTGCCAAGCCAA	TTCGGGG	GTCTCTATAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCTCCGCCTGCCAAGCCAATTCGGGGGTCTCTATATTACTATTACGGCATGGATGTT	ARAPPAKPIRGSLYYYYGMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	25	4	0	86.2
CDR1-IMGT	30	53	24	15	9	0	62.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	211	38	0	84.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  Y  A  F  G  E  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4180   1    GGTCCCTGAGACTCTCCTGTGTGGGGTCTGGGTACGCCTTTGGTGAATATTGGATGCATTGGGTCCGCCAAGCTCCAGGGAAGGGACTGG  90
V  84.7% (211/249)  IGHV3-74*01  47   .....................CA.CC.....A.T.A....CA..AGC..C........C..........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  L  N  K  D  G  G  T  T  R  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4180   91   AGTGGGTCTCACGTCTGAATAAAGATGGGGGTACCACAAGATATGTGGACTCCGTGAAAGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  84.7% (211/249)  IGHV3-74*01  137  T.............A.T....GT......A...G......C..C.C............G.....A.........................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  F  L  Q  M  N  N  L  R  V  D  D  T  A  V  Y  F  C  A  R  A  P  P  A  K  P  I  
                    Query_4180   181  AGAACACCTTGTTTCTCCAAATGAACAATCTCAGAGTCGACGACACGGCCGTGTATTTTTGTGCAAGAGCTCCGCCTGCCAAGCCAATTC  270
V  84.7% (211/249)  IGHV3-74*01  227  .......GC...A...G..........G...G....C...G........T.......AC..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-10*01  13   ---------------------------------------------------------------------------------------...  15

                                      DR3-IMGT-------------------------->                                
                                      R  G  S  L  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_4180   271  GGGGGTCTCTATATTACTATTACGGCATGGATGTTTGGGGCCAAGGGACCACCGTCACCGTCTCCTC  337
D  100.0% (7/7)     IGHD3-10*01  16   ....---------------------------------------------------------------  19
J  90.6% (48/53)    IGHJ6*02     9    --------------.....C.....T.....C..C.................G..............  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_6446

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           405     4e-115
IGHD2-15*01                                                                                           10.3    137   
IGHJ3*01                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	T	CTGCT	TCCGAAGACTTCGGCCCCC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGCTTCCGAAGACTTCGGCCCCCGATGCTTTTGATTTC	ARDLLPKTSAPDAFDF	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  I  S  C  K  A  S  G  Y  I  F  T  S  Y
                    Query_4181   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCATCTGGATACATCTTCACCAGCTA  90
V  94.5% (275/291)  IGHV1-46*01  6    ..................G.................................G........................C............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  L  S  W  V  R  Q  A  P  E  R  G  L  E  W  M  G  I  I  N  P  S  G  G  I  T  S  Y  A  Q
                    Query_4181   91   CTATCTAAGCTGGGTGCGCCAGGCCCCTGAACGAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTATCACAAGCTACGCACA  180
V  94.5% (275/291)  IGHV1-46*01  96   ....A.GCA.........A..........G..A.........................................G...............  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  A  M  T  R  D  T  S  T  S  T  V  Y  M  Q  L  N  S  L  R  S  E  D  T  A
                    Query_4181   181  GAAGTTCCAGGGCAGAGTCGCCATGACCAGGGACACGTCCACTAGTACAGTCTACATGCAGCTGAACAGCCTGAGATCTGAGGACACGGC  270
V  94.5% (275/291)  IGHV1-46*01  186  ...................A......................G..C............G......G........................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  D  L  L  P  K  T  S  A  P  D  A  F  D  F  W  G  Q  G  T  L  V  T  V  S
                    Query_4181   271  CGTGTATTACTGTGCGAGAGATCTGCTTCCGAAGACTTCGGCCCCCGATGCTTTTGATTTCTGGGGCCAAGGGACACTGGTCACCGTCTC  360
V  94.5% (275/291)  IGHV1-46*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD2-15*01  22   ----------------------.....---------------------------------------------------------------  26
J  95.9% (47/49)    IGHJ3*01     2    ----------------------------------------------............G.................A.............  45

                                           
                                        S  
                    Query_4181   361  TTCAG  365
J  95.9% (47/49)    IGHJ3*01     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_55203

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           308     4e-86
IGHD3-10*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCCGCCGC	TTCGGGGAGTT	GACGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCCGCCGCTTCGGGGAGTTGACGCTTGACTAC	ARDGRRFGELTLDY	229	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	9	2	0	81.8
CDR1-IMGT	19	42	24	21	3	0	87.5
FR2-IMGT	43	93	51	50	1	0	98
CDR2-IMGT	94	114	21	17	4	0	81
FR3-IMGT	115	228	114	108	6	0	94.7
CDR3-IMGT (germline)	229	236	8	8	0	0	100
Total	N/A	N/A	229	213	16	0	93


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  S  V  S  T  N  Y  M  S  W  F  R  Q  A  P  G  K  G  L  E  W  V  S  V  L  
                    Query_4182   8    GTGCAGTTTCTGGGTTCAGCGTCAGTACCAATTACATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTCTTT  97
V  93.0% (213/229)  IGHV3-53*01  65   ......CC..........C........G...C............G.........................................A...  154
                                         A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  

                                      --CDR2-IMGT-----><----------------------------------------------------FR3-IMGT------------
                                      Y  S  G  G  V  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  
                    Query_4182   98   ATAGTGGTGGTGTCACATTCTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACATTGTATCTTCAAA  187
V  93.0% (213/229)  IGHV3-53*01  155  ....C......AG.....A.........................................................GC............  244
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  

                                      ----------------------------------------><----------------CDR3-IMGT--------------->       
                                      M  N  I  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  R  R  F  G  E  L  T  L  D  Y  W  G  
                    Query_4182   188  TGAATATCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGAGATGGCCGCCGCTTCGGGGAGTTGACGCTTGACTACTGGGGCC  277
V  93.0% (213/229)  IGHV3-53*01  245  ....C.G..............................C...........-----------------------------------------  293
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                            
D  100.0% (11/11)   IGHD3-10*01  13   -----------------------------------------------------------...........--------------------  23
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------...............  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_4182   278  AGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (42/42)   IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_55200

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            335     4e-94
IGHD3-22*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAGG	ATTACTTTGATAGGAGT	CGTCACGACGAATT	CGGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCAGGATTACTTTGATAGGAGTCGTCACGACGAATTCGGTCTGGACGTC	ARDQDYFDRSRHDEFGLDV	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  D  S  F  S  G  D  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4183   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCTTCAGTGGCGATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.1% (231/248)  IGHV4-4*02   49   ...............................G....A....CA.TAG...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  A  I  I  S  I  D  K  S  N 
                    Query_4183   91   GAGTGGATTGGGGAAGTCTATGATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGCCATCATATCAATAGACAAGTCCAAC  180
V  93.1% (231/248)  IGHV4-4*02   139  ...............A.....C..........................................T..C.......G.............G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       K  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  D  Y  F  D  R  S 
                    Query_4183   181  AAACAGTTCTCCCTAAAACTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGACCAGGATTACTTTGATAGGAGT  270
V  93.1% (231/248)  IGHV4-4*02   229  ..C...........G..G....G.............................................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  88.2% (15/17)    IGHD3-22*01  3    -------------------------------------------------------------------------......A......T...  19

                                      MGT----------------------->                                 
                                       R  H  D  E  F  G  L  D  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_4183   271  CGTCACGACGAATTCGGTCTGGACGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCCTCA  330
J  95.7% (44/46)    IGHJ6*02     17   --------------....A.......................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_55201

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           321     7e-90
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTCCTTTGACTAC	GGGKNLLGSYSFDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	246	1	1	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_4184   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  92.2% (224/243)  IGHV4-39*01  50   .....TCC...A..................G.....T.....G.....G.........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  S  R  L  T  I  S  V  D  T  S  
                    Query_4184   94   TGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAGTCGACTCACCATTTCCGTAGACACGTCCA  183
V  92.2% (224/243)  IGHV4-39*01  140  ..........................A....G.G.........CA..........C.........G.......A................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S  
                    Query_4184   184  AGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGTT  273
V  92.2% (224/243)  IGHV4-39*01  230  ...................G....G...........................G..........---------------------------  292
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                             
D  100.0% (6/6)     IGHD3-16*01  18   -----------------------------------------------------------------......-------------------  23

                                      ------------->                                  
                                      Y  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4184   274  ACTCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.9% (47/48)    IGHJ4*02     1    ...A............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_55206

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         332     3e-93
IGHD3-9*01                                                                                            27.6    8e-04
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GTCTCGGA	GATATTTTGACTGG	GGCAGGACTGGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGTCTCGGAGATATTTTGACTGGGGCAGGACTGGGCGAC	ARGLGDILTGAGLGD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  N  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4185     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAATAGTGGTGGTTATTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  92.4% (231/250)  IGHV4-30-4*01  49   ..................A.....................GC.......A...C........T...........................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  M  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  T  S  G  D  T  S 
                    Query_4185     91   CTGGAGTGGATTGGATACATGTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTGACCACTTCTGGAGACACATCC  180
V  92.4% (231/250)  IGHV4-30-4*01  139  ..............G.....C.............G.................................T....TA..A.T......G...  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         T  D  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  G  D  I  L  T 
                    Query_4185     181  ACGGACCAGTTCTCCCTGAAGCTGACCTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCCAGAGGTCTCGGAGATATTTTGACT  270
V  92.4% (231/250)  IGHV4-30-4*01  229  .A.A.....................G.................................C..........--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (14/14)   IGHD3-9*01     8    ------------------------------------------------------------------------------............  19

                                        ----------------->                                  
                                         G  A  G  L  G  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4185     271  GGGGCAGGACTGGGCGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (14/14)   IGHD3-9*01     20   ..--------------------------------------------------  21
J  100.0% (36/36)   IGHJ4*02       13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_55204

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           347     7e-98
IGHD1-26*01                                                                                           10.3    122  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	GGGAG	GACCGATCGTATTCT	TACAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGGAGGACCGATCGTATTCTTACAACGGTGTGGACGTC	ARDREDRSYSYNGVDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_4186   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATTACATGACTTGGATTCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-11*06  47   .................................................C.......GC.....C.........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  T  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4186   91   AGTGGATTTCATACATTAGTAGTACTAGTAGTTACACGAACTATGCAGATTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  94.4% (236/250)  IGHV3-11*06  137  .....G..................G............A.....C.....C...................................C....  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  K  A  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  E  D  R  S  Y  
                    Query_4186   181  AGAAGGCACTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATCGGGAGGACCGATCGTATT  270
V  94.4% (236/250)  IGHV3-11*06  227  ....CT..........G...................................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  9    ------------------------------------------------------------------------.....-------------  13

                                      T------------------>                                 
                                      S  Y  N  G  V  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4186   271  CTTACAACGGTGTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.1% (49/51)    IGHJ6*02     12   --...T.....A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_55205

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           308     4e-86
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGACAG	ATTGTCGTAGTCCCCGGTGCTA	C	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGACAGATTGTCGTAGTCCCCGGTGCTACCTACGGTATGGACGTC	ARDRQIVVVPGATYGMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	221	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  A  S  G  G  S  S  S  S  Y  F  W  T  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_4187   1    ACCCTGTCCCTCACCTGCACTGCCTCTGGTGGCTCCAGCAGTAGTTACTTCTGGACTTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  90.2% (221/245)  IGHV4-59*01  49   ......................T..............T...........A.....GC.................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  D  G  S  G  S  P  R  Y  N  P  S  L  K  S  R  V  T  M  S  L  D  T  S  K  N 
                    Query_4187   91   TGGATTGGCTATGTCGATGGCAGTGGGAGTCCCAGGTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCGCTAGACACGTCCAAGAAC  180
V  90.2% (221/245)  IGHV4-59*01  139  ........G...A..T..TA.........CA...AC................................A..AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       R  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  Q  I  V  V  V  P  G 
                    Query_4187   181  CGATTCTCCCTGAGGCTGAATTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGACAGATTGTCGTAGTCCCCGGT  270
V  90.2% (221/245)  IGHV4-59*01  229  .AG..........A.....GC............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  81.8% (18/22)    IGHD2-2*01   6    ------------------------------------------------------------------------.....A.....A..A.C.  23

                                      -------------------->                                 
                                       A  T  Y  G  M  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_4187   271  GCTACCTACGGTATGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  324
D  81.8% (18/22)    IGHD2-2*01   24   ....--------------------------------------------------  27
J  98.0% (48/49)    IGHJ6*02     14   -----...............................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_35852

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         319     2e-89
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	CC	TACTATGA	CAGAAGGGGGTTTC	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGCCTACTATGACAGAAGGGGGTTTCATGGTTTTGATATC	ARAYYDRRGFHGFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  S  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  H  P  P  G  K  G 
                    Query_4188     1    ACCCTGTCCCTCACCTGCGCTGTCTCTAGTGGCTCCATTAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCACCCCCCAGGGAAGGGC  90
V  90.8% (227/250)  IGHV4-30-4*01  49   ..................A........G..........C...................................G...............  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  D  N  S  G  R  T  Y  Y  S  P  A  L  K  S  R  A  F  M  S  I  N  T  S 
                    Query_4188     91   CTGGAGTGGATTGGTTACATCGATAACAGTGGGAGGACCTACTACAGCCCGGCCCTCAAGAGTCGAGCTTTCATGTCGATAAACACGTCC  180
V  90.8% (227/250)  IGHV4-30-4*01  139  ..............G......T..T..........C..........A....T...............T.AC...A..AG..G........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  N  Q  F  P  L  T  L  R  S  V  T  A  A  D  T  A  K  Y  Y  C  A  R  A  Y  Y  D  R  R  G 
                    Query_4188     181  AAGAACCAGTTCCCCCTGACCCTGAGGTCTGTGACTGCCGCAGACACGGCCAAGTATTACTGTGCCAGAGCCTACTATGACAGAAGGGGG  270
V  90.8% (227/250)  IGHV4-30-4*01  229  ............T......AG.....C........................GT.................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-22*01    5    ------------------------------------------------------------------------........----------  12

                                        ----------------->                                  
                                         F  H  G  F  D  I  W  G  P  G  T  V  V  T  V  S  S  
                    Query_4188     271  TTTCATGGTTTTGATATCTGGGGCCCAGGGACAGTGGTCACCGTCTCTTCAG  322
J  93.8% (45/48)    IGHJ3*02       3    ----...C.................A.......A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_334289

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           344     6e-97
IGHD6-19*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGG	AGCAGTGGCTGGTA	TGATAGG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGAGCAGTGGCTGGTATGATAGGTGACTAT	ARDGAVAGMIGDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4189   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGATATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  94.0% (235/250)  IGHV3-21*01  47   ..............................................C..........................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  G  V  S  N  D  Y  K  Y  Y  A  D  S  L  M  G  R  F  T  I  S  R  D  N  A  
                    Query_4189   91   AGTGGGTCTCATCCATTGGTGTTAGTAATGATTACAAATACTACGCAGATTCACTGATGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-21*01  137  .................A..AG.....G.AG.....T............C...G...A................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  G  A  V  A  G  M  
                    Query_4189   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGGGTCGAGGACACGGCTGTGTATTACTGTGCGAGAGACGGAGCAGTGGCTGGTATGA  270
V  94.0% (235/250)  IGHV3-21*01  227  ............A.....................A.C.................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD6-19*01  7    -------------------------------------------------------------------------..............---  20

                                      ---------->                                  
                                      I  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4189   271  TAGGTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (40/41)    IGHJ4*02     8    ----......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_334288

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           361     4e-102
IGHD1-7*01                                                                                            16.1    2.2   
IGHJ2*01                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-7*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TCTCAGGGAGTCGG	GGAACTAC	GGAG	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTCTCAGGGAGTCGGGGAACTACGGAGTGGTACTTCGATCTC	ARVSGSRGTTEWYFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4190   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACTTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-74*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  M  K  S  D  G  S  S  T  S  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  A  
                    Query_4190   91   TGTGGGTCTCACGTATGAAAAGCGATGGAAGTAGCACAAGCTACGCGGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (240/249)  IGHV3-74*01  137  ................T..T..T.....G...........................A.................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  S  G  S  R  G  T  
                    Query_4190   181  GGAACACGTTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGTCTCAGGGAGTCGGGGAACTA  270
V  96.4% (240/249)  IGHV3-74*01  227  A.......C............................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-7*01   10   -----------------------------------------------------------------------------------.......  16

                                      T------------------>                                  
                                      T  E  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4190   271  CGGAGTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  100.0% (8/8)     IGHD1-7*01   17   .-----------------------------------------------------  17
J  100.0% (49/49)   IGHJ2*01     5    -----.................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_334287

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4191   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_4191   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_4191   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4191   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_334286

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           263     2e-72
IGHD2-21*01                                                                                           10.3    127  
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGGGCGGCA	CATAT	GAAAAAAGAAGCCCTACGTCGGCGGTCCG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGCGGCACATATGAAAAAAGAAGCCCTACGTCGGCGGTCCGCTACTACGGGATGGACGTC	AKGGTYEKRSPTSAVRYYGMDV	240	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	18	8	0	69.2
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	99	15	0	86.8
CDR3-IMGT (germline)	240	243	4	4	0	0	100
Total	N/A	N/A	240	204	36	0	85


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  G  V  N  G  G  S  L  S  G  S  F  W  S  W  V  R  Q  P  P  G  K  G  L  E  
                    Query_4192   4    CCCTGAGACTCTCCTGTGGTGTCAACGGTGGGTCCCTCAGTGGGTCTTTCTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTGGAGT  93
V  85.0% (204/240)  IGHV4-34*01  50   .....TCC...A....C.C....T.T.........T.......T.AC.A......C...A......................G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  S  D  G  G  I  T  S  Y  N  P  S  L  K  S  R  V  V  I  S  V  D  T  S  K  N  
                    Query_4192   94   GGATCGGGGAAATCAGTGATGGTGGAATCACCAGTTACAACCCGTCCCTCAAGAGTCGAGTCGTCATTTCAGTGGACACGTCCAAGAACC  183
V  85.0% (204/240)  IGHV4-34*01  140  ....T..........A.C..A......G.....AC...........................AC...A.....A................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------------CDR3-
                                      Q  F  S  L  K  V  S  S  V  R  A  A  D  T  A  L  Y  F  C  A  K  G  G  T  Y  E  K  R  S  P  
                    Query_4192   184  AGTTCTCCCTGAAGGTGAGTTCTGTGAGGGCCGCGGACACGGCACTTTACTTCTGTGCGAAGGGCGGCACATATGAAAAAAGAAGCCCTA  273
V  85.0% (204/240)  IGHV4-34*01  230  ..............C....C.......CC..............TG.G..T.A........------------------------------  289
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (5/5)     IGHD2-21*01  3    ---------------------------------------------------------------------.....----------------  7

                                      IMGT--------------------------->                                 
                                      T  S  A  V  R  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_4192   274  CGTCGGCGGTCCGCTACTACGGGATGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  338
J  96.2% (50/52)    IGHJ6*02     11   -------------.........T...............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_334285

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           352     3e-99
IGHD1-26*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCG	GGGAGCTAC	GTTCCCGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGGGGAGCTACGTTCCCGCCTACTTTGACTAC	ARDPGSYVPAYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	30	30	29	1	0	96.7
CDR1-IMGT	31	54	24	22	2	0	91.7
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	129	24	23	1	0	95.8
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	238	13	0	94.8


Alignments

                                      <----------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT-------
                                       G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L 
                    Query_4193   1    GGTTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGGCTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTG  90
V  94.8% (238/251)  IGHV3-21*01  46   ..G..........................................A......G.................................G...  135
                                       G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L 

                                      --------------><-------CDR2-IMGT------><--------------------------------------------------
                                       E  W  V  S  S  I  S  S  S  G  S  Y  I  F  Y  A  D  S  V  G  G  R  F  T  I  S  R  D  N  A 
                    Query_4193   91   GAGTGGGTCTCTTCAATTAGTAGTAGTGGTAGTTACATATTCTACGCAGACTCAGTGGGGGGCCGCTTCACCATCTCCAGAGACAACGCC  180
V  94.8% (238/251)  IGHV3-21*01  136  ...........A..C............A............A................AA......A........................  225
                                       E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  P  G  S  Y  V  P 
                    Query_4193   181  AAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGATCCGGGGAGCTACGTTCCC  270
V  94.8% (238/251)  IGHV3-21*01  226  .........................................G...........G.................-------------------  296
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD1-26*01  9    ---------------------------------------------------------------------------.........------  17

                                      -------------->                                  
                                       A  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4193   271  GCCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  319
J  97.9% (46/47)    IGHJ4*02     2    --..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_334283

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4194   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (226/248)  IGHV3-21*01  47   ............................T............AG...C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  G  
                    Query_4194   91   AGTGGGTCTCATCCATCAGTAGTAGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  91.1% (226/248)  IGHV3-21*01  137  ................T........T...AGT......T.C..C..A......G..A..............................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_4194   181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  91.1% (226/248)  IGHV3-21*01  227  ....C..................AA...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4194   271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_334282

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           293     2e-81
IGHD7-27*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GAAC	AACTGGGGA	ATC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGAACAACTGGGGAATCGACTAC	ARNNWGIDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	217	30	0	87.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  R  S  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4195   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGCTTCAGCTTCAGAAGCCACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGC  90
V  87.9% (217/247)  IGHV3-74*01  47   ...............................A....C......T...T.........................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      L  W  V  S  R  I  D  Y  D  G  G  T  L  D  Y  A  A  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_4195   91   TGTGGGTCTCACGTATTGACTACGATGGGGGTACGTTGGACTACGCGGCCTCCGTGGAGGGACGATTCACCATCTCCAGAGACAACGCCG  180
V  87.9% (217/247)  IGHV3-74*01  137  .................A.TAGT......A...GCACAAG........A.......A....C...........................A  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      A  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  S  A  V  Y  Y  C  A  R  N  N  W  G  I  D  Y  
                    Query_4195   181  CCAACACGCTCTATCTGCAAATGAACAGTCTAAGAGTCGAGGACTCGGCTGTGTATTATTGCGCAAGGAACAACTGGGGAATCGACTACT  270
V  87.9% (217/247)  IGHV3-74*01  227  AG........G....................G....C.......A.............C..T.....-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD7-27*01  3    -----------------------------------------------------------------------.........----------  11
J  100.0% (40/40)   IGHJ4*02     9    -----------------------------------------------------------------------------------.......  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4195   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (40/40)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_334281

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           311     4e-87
IGHD4-4*01                                                                                            19.9    0.15 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATCAGC	CAGTAACTAC	TCTCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCAGCCAGTAACTACTCTCGGCTAC	ARNQPVTTLGY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  T  V  S  N  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4196   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGGTCACCGTCAGTAACAACTATATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.6% (222/245)  IGHV3-53*01  47   ................................T............G......C....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  L  S  V  M  Y  S  R  G  A  T  R  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  S  S  K  
                    Query_4196   91   AGTGGCTCTCAGTCATGTATAGTCGTGGAGCCACAAGGTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  90.6% (222/245)  IGHV3-53*01  137  .....G.......T..T.....CG....TAG....TAC................A..........................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      N  T  V  Y  L  Q  M  K  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  N  Q  P  V  T  T  L  G  
                    Query_4196   181  ACACGGTGTATCTTCAAATGAAAAACCTGAGAGTCGAGGACACGGCCGTCTATTACTGTGCGAGAAATCAGCCAGTAACTACTCTCGGCT  270
V  90.6% (222/245)  IGHV3-53*01  227  .....C................C.G........C...............G...............-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (10/10)   IGHD4-4*01   7    ------------------------------------------------------------------------..........--------  16
J  97.4% (37/38)    IGHJ4*02     11   ----------------------------------------------------------------------------------------..  12

                                      ->                                  
                                      Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_4196   271  ACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.4% (37/38)    IGHJ4*02     13   .........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_334280

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4197   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  98.4% (239/243)  IGHV4-59*01  49   ......................................................................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_4197   91   TGGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  .........T................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_4197   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (18/20)    IGHD5-18*01  1    ----------------------------------------------------------------..........C.....T...------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4197   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_93876

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            403     1e-114
IGHD3-10*01                                                                                           12.2    33    
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TCGGGG	CCTCCTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATCGGGGCCTCCTGTTTGACTTC	ARDRGLLFDF	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	26	1	0	96.3
FR3-IMGT	159	272	114	107	7	0	93.9
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	280	269	11	0	96.1


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  G  I  S  G  D  S  V  S  S  D  T  A  A  W  N  W  
                    Query_4198   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGGCATCTCCGGGGACAGTGTCTCTAGCGACACTGCTGCTTGGAACTGGA  90
V  96.1% (269/280)  IGHV6-1*01   26   ..........................................C.........................A...G.................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  K  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_4198   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAAGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAGG  180
V  96.1% (269/280)  IGHV6-1*01   116  ...................................................G....................................AA  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      G  R  I  T  I  N  S  D  T  S  K  N  Q  F  S  L  H  L  N  S  M  T  P  E  D  T  A  V  Y  Y  
                    Query_4198   181  GTCGAATAACCATCAACTCAGACACATCCAAGAACCAGTTCTCCCTGCACCTGAACTCTATGACTCCCGAGGACACGGCTGTATACTACT  270
V  96.1% (269/280)  IGHV6-1*01   206  .................C...............................G.........G......................G..T....  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------CDR3-IMGT--------->                                  
                                      C  A  R  D  R  G  L  L  F  D  F  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4198   271  GTGCAAGAGATCGGGGCCTCCTGTTTGACTTCTGGGGCCAGGGAATCCTGGTCACCGTCTCGTCAG  336
V  96.1% (269/280)  IGHV6-1*01   296  ..........--------------------------------------------------------  305
                                      C  A  R                                                           
D  100.0% (6/6)     IGHD3-10*01  14   ----------......--------------------------------------------------  19
J  93.0% (40/43)    IGHJ4*02     6    -----------------------.......A..............C...............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_35856

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            315     5e-88
IGHD2-15*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCATTGTGGA	AGTGGTGG	CTGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCATTGTGGAAGTGGTGGCTGTTTCTACTTTGACATC	ARVHCGSGGCFYFDI	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	46	5	0	90.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	224	23	0	90.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  S  D  S  I  S  G  S  D  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_4199   1    ACCCTGTCCCTCACCTGCGCTGTCTCTAGTGACTCCATCAGCGGTTCTGACTGGTGGACTTGGATCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.7% (224/247)  IGHV4-4*02   49   ...........................G...G..........A..AG.A.........G....G..........................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  S  A  D  T  H  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  N  S  K 
                    Query_4199   91   GAGTGGATCGGAGAGATCCATCATAGTGCGGACACCCACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAACTCTAAG  180
V  90.7% (224/247)  IGHV4-4*02   139  ........T..G..A...T.........G.AG....A..............................................G..C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  E  L  R  S  V  T  A  A  D  A  A  L  Y  Y  C  A  R  V  H  C  G  S  G  G  C 
                    Query_4199   181  AACCAATTCTCCCTGGAGCTGAGGTCTGTGACCGCCGCGGACGCGGCCCTGTATTACTGTGCGAGAGTTCATTGTGGAAGTGGTGGCTGT  270
V  90.7% (224/247)  IGHV4-4*02   229  .....G.........A.......C..................A.....G..................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD2-15*01  11   ------------------------------------------------------------------------------........----  18

                                      -------------->                                  
                                       F  Y  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4199   271  TTCTACTTTGACATCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  95.7% (45/47)    IGHJ4*02     2    --..........TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_67253

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            302     3e-84
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	247	222	22	3	89.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4200   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  87
V  89.9% (222/247)  IGHV4-4*02   49   ..................GC.........T...TCC......A..AG........GG.......................G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  K 
                    Query_4200   88   GAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCAAG  177
V  89.9% (222/247)  IGHV4-4*02   139  .......................T......A................................G.......A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  E  L  S  L  T  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G  W 
                    Query_4200   178  AATGAACTCTCCCTGACCCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGTGGGTAGCAGTGGCTGG  267
V  89.9% (222/247)  IGHV4-4*02   229  ..CC.GT.........AG....GC..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-19*01  6    -----------------------------------------------------------------------------.............  18

                                      -------->                                
                                       L  D  S  W  G  Q  G  T  L  V  V  V  S  S
                    Query_4200   268  CTTGACTCCTGGGGCCAGGGAACCCTGGTCGTCGTCTCCTC  308
J  92.5% (37/40)    IGHJ4*02     7    -......A......................AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_93874

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           420     7e-120
IGHD3-10*01                                                                                           12.2    36    
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGG	ATTATA	GAAAACAATCTCTTTTCGCG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGGATTATAGAAAACAATCTCTTTTCGCGCGGTATGGACGTC	ARRIIENNLFSRGMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_4201   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGTAGCTA  90
V  96.5% (279/289)  IGHV1-69*01  6    ..................G.................................................................C.....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  L  D  T  P  N  Y  A  Q
                    Query_4201   91   TGATATCAATTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTGGATACACCAAACTACGCACA  180
V  96.5% (279/289)  IGHV1-69*01  96   ..C.....GC...........................................................T.G....G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  A  R  V  T  I  T  A  D  V  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_4201   181  GAAGTTCCAGGCCAGAGTCACGATTACCGCGGACGTATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  96.5% (279/289)  IGHV1-69*01  186  ...........G.......................A......................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  R  I  I  E  N  N  L  F  S  R  G  M  D  V  W  G  Q  G  S  T  V  T  V  S
                    Query_4201   271  CGTGTATTACTGTGCGAGAAGGATTATAGAAAACAATCTCTTTTCGCGCGGTATGGACGTCTGGGGCCAAGGGTCCACGGTCACCGTCTC  360
V  96.5% (279/289)  IGHV1-69*01  276  ...................-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-10*01  24   ----------------------......--------------------------------------------------------------  29
J  97.8% (45/46)    IGHJ6*02     17   ------------------------------------------------.........................A................  58

                                          
                                        S 
                    Query_4201   361  CTCA  364
J  97.8% (45/46)    IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_93873

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            416     2e-118
IGHD5-18*01                                                                                           18.0    0.65  
IGHJ3*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD5-18*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GTTA	GTGGGTACAACTATG	AA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTTAGTGGGTACAACTATGAAGATGCTCTTGACATC	AVSGYNYEDALDI	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	276	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_4202   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATACACCTTCACCGGCTA  90
V  96.5% (276/286)  IGHV1-2*04   6    ..................G...............................................T.......................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  D  T  N  Y  A  Q
                    Query_4202   91   CTATATACACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGACACAAACTATGCACA  180
V  96.5% (276/286)  IGHV1-2*04   96   ......G...................................................................G...............  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  S  L  T  S  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  S  S  D  D  T  A
                    Query_4202   181  GAAGTTTCAGGGCTGGGTCTCCCTGACGAGCGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGTTCTGACGACACGGC  270
V  96.5% (276/286)  IGHV1-2*04   186  ...................A..A....C..G............................................A..............  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  V  S  G  Y  N  Y  E  D  A  L  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_4202   271  CGTGTATTATTGTGCGGTTAGTGGGTACAACTATGAAGATGCTCTTGACATCTGGGGCCAAGGGACAATGGTCATCGTCTCTTCAG  356
V  96.5% (276/286)  IGHV1-2*04   276  .........C......----------------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                       
D  86.7% (13/15)    IGHD5-18*01  1    --------------------....A....G.....---------------------------------------------------  15
J  93.9% (46/49)    IGHJ3*02     2    -------------------------------------......T....T.........................C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_93872

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           310     1e-86
IGHD3-3*01                                                                                            14.1    8.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGGGTTG	GGAGTGG	AATCTGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGGGTTGGGAGTGGAATCTGGTTGACTTC	ARGGWEWNLVDF	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	131	27	19	5	3	70.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	250	226	21	3	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  V  T  D  N  Y  M  S  W  I  R  Q  A  T  G  K  G  L  
                    Query_4203   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACCGTGACTGACAACTACATGAGTTGGATCCGCCAGGCTACAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-11*01  47   ................................T.....T.C.G....T..........C...............C...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><--------CDR2-IMGT--------><------------------------------------------------
                                      E  W  V  S  S  I  G  G  S  G  D  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  
                    Query_4203   91   AGTGGGTTTCATCCATTGGTGGAAGTGGGGACAGTACCATCTACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACG  180
V  90.4% (226/250)  IGHV3-11*01  137  ............A....A..A.T.....T---........A.................................................  223
                                      E  W  V  S  Y  I  S  S  S  G     S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  

                                      ----FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT--
                                      A  K  K  S  L  Y  L  E  M  D  S  L  R  D  E  D  T  A  L  Y  Y  C  A  R  G  G  W  E  W  N  
                    Query_4203   181  CCAAGAAGTCTCTGTATCTGGAAATGGACAGCCTGAGAGACGAGGACACGGCCCTATATTATTGTGCGAGGGGGGGTTGGGAGTGGAATC  270
V  90.4% (226/250)  IGHV3-11*01  224  .......C..A.........C.....A............C.............G.G.....C........--------------------  293
                                      A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                       
D  100.0% (7/7)     IGHD3-3*01   15   -------------------------------------------------------------------------------.......----  21

                                      ---------->                                  
                                      L  V  D  F  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_4203   271  TGGTTGACTTCTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  315
J  95.2% (40/42)    IGHJ4*02     7    ---......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_154929

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           286     1e-79
IGHD3-9*01                                                                                            16.1    2.2  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCGA	TATTACGGTAT	GACTCCTATA	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCGATATTACGGTATGACTCCTATAACGGTATGGACGTC	ARDSILRYDSYNGMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	96	18	0	84.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	214	31	0	87.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  S  S  M  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4204   1    ACCCTGTCCCTCACCTGCTCGGTCTCTGGTAGCTCCATGACTAGTTACTACTGGAGTTGGATCCGGCAGCCCCCCGGAAAGGGACTGGAG  90
V  87.3% (214/245)  IGHV4-59*01  49   ..................A.T.........G.......C.G...............C.................A..G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  I  S  K  Y  N  P  S  L  K  S  R  A  T  V  S  M  D  T  S  K  N 
                    Query_4204   91   TGGATTGGCTATATCTATTACACTGGGATAAGCAAGTACAATCCCTCCCTCAAGAGTCGAGCCACCGTATCGATGGACACCTCCAAGAAT  180
V  87.3% (214/245)  IGHV4-59*01  139  ........G.............G.....GC.C...C.....C...................T....A....AG.A.....G........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  F  L  N  V  N  S  V  T  S  A  D  T  A  V  Y  F  C  A  R  D  S  I  L  R  Y  D  S  Y 
                    Query_4204   181  CAATTCTTCCTGAACGTCAACTCTGTGACCTCTGCGGACACGGCCGTATATTTCTGTGCGAGAGATTCGATATTACGGTATGACTCCTAT  270
V  87.3% (214/245)  IGHV4-59*01  229  ..G....C......GC.G.G..........G................G....A............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.9% (10/11)    IGHD3-9*01   2    ----------------------------------------------------------------------.......A...---------  12

                                      -------------->                                 
                                       N  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_4204   271  AACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  318
J  97.9% (46/47)    IGHJ6*02     16   -....................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_165763

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           406     1e-115
IGHD1-26*01                                                                                           12.2    37    
IGHJ3*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ATAGCGGAAACTACT	TATGTTAGAGACTC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGATAGCGGAAACTACTTATGTTAGAGACTCTGATGCTTTTGATATC	ARDRIAETTYVRDSDAFDI	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  N  N  Y 
                    Query_4205   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTCAATAACTAT  91
V  94.8% (275/290)  IGHV1-18*01  7    .................................................................T..............T.CC.G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  I  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_4205   92   GGTTTCATCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAG  181
V  94.8% (275/290)  IGHV1-18*01  97   ...A...G..................................................................................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  K  G  R  F  T  M  T  T  D  T  S  T  S  T  A  S  V  E  L  R  S  L  R  S  D  D  T  A 
                    Query_4205   182  AAATTCAAGGGCAGATTCACCATGACCACGGACACATCCACGAGCACAGCCTCCGTGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (275/290)  IGHV1-18*01  187  ..GC..C........G.............A......................A.A...................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  A  R  D  R  I  A  E  T  T  Y  V  R  D  S  D  A  F  D  I  W  G  Q  G  T  M  V 
                    Query_4205   272  GTGTATTACTGCGCGAGAGATCGGATAGCGGAAACTACTTATGTTAGAGACTCTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTC  361
V  94.8% (275/290)  IGHV1-18*01  277  ...........T........----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  80.0% (12/15)    IGHD1-26*01  4    ------------------------....T..G.G.....---------------------------------------------------  18
J  100.0% (50/50)   IGHJ3*02     1    -----------------------------------------------------.....................................  37

                                                   
                                       T  V  S  S  
                    Query_4205   362  ACCGTCTCTTCAG  374
J  100.0% (50/50)   IGHJ3*02     38   .............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_327947

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	273	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_4206   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  95.5% (273/286)  IGHV5-51*01  6    ..................................................A...............T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_4206   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCTTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGACACCAGATACAGTCC  180
V  95.5% (273/286)  IGHV5-51*01  96   ......................A.......G......C......G..............................T...........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  N  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_4206   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  95.5% (273/286)  IGHV5-51*01  186  ....................C...................A...G.......................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        M  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  P  G  T  L  V  T  V  S  S 
                    Query_4206   271  CATGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCA  352
V  95.5% (273/286)  IGHV5-51*01  276  ................------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                   
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     8    ------------------------------------------..............A.........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_50363

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           272     2e-75
IGHD7-27*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD7-27*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGACAAGGGG	ACTGGGGA	N/A	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAAGGGGACTGGGGATGGTACTTCGATCTC	ARRQGDWGWYFDL	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	60	33	26	4	3	78.8
FR2-IMGT	61	111	51	44	7	0	86.3
CDR2-IMGT	112	129	21	12	6	3	57.1
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	252	217	29	6	86.1


Alignments

                                      <--------FR1-IMGT---------><-----------CDR1-IMGT-----------><--------------------FR2-IMGT-
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  S  A  G  H  Y  W  S  W  I  R  Q  T  P  G  K 
                    Query_4207   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGCAGTGCTGGTCACTATTGGAGTTGGATCCGCCAGACCCCCGGAAAG  90
V  86.1% (217/252)  IGHV4-31*03  49   ...............................G............---..G....T....C.....C............CA...A..G...  135
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S     G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K 

                                      --------------------><-----CDR2-IMGT-----><-----------------------------------------------
                                       G  L  E  W  M  G  Y  I  F  Y  T  V     P  Y  Y  N  P  S  L  K  S  R  L  T  M  S  G  D  T 
                    Query_4207   91   GGCCTGGAGTGGATGGGTTACATCTTTTATACTGTGC---CATACTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCAGGAGACACC  177
V  86.1% (217/252)  IGHV4-31*03  136  ..............T..G.......A...C.G..G.AGCA.C..............C............G.T.....A....T......G  225
                                       G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T 

                                      -----FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT
                                       A  K  N  Q  F  P  L  R  L  T  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  R  Q  G  D  W  G 
                    Query_4207   178  GCTAAGAACCAGTTTCCCCTGAGGCTGACCTCTGTGACTTCCGCGGACACGGCCGTGTATTACTGTGCGAGACGACAAGGGGACTGGGGA  267
V  86.1% (217/252)  IGHV4-31*03  226  T.............CT......A.....G..........G................................------------------  297
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                   
D  100.0% (8/8)     IGHD7-27*01  4    ----------------------------------------------------------------------------------........  11

                                      -------------->                                  
                                       W  Y  F  D  L  W  G  R  G  P  L  V  T  V  S  S  
                    Query_4207   268  TGGTACTTCGATCTCTGGGGCCGTGGCCCCCTGGTCACTGTCTCCTCAG  316
J  98.0% (48/49)    IGHJ2*01     5    ...........................A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_50361

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            313     1e-87
IGHD6-19*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGGATATCGAACAT	CAGTGGGTGG	AATACACGCTT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGATATCGAACATCAGTGGGTGGAATACACGCTTTGGACGTC	AGYRTSVGGIHALDV	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	102	12	0	89.5
CDR3-IMGT (germline)	241	242	2	2	0	0	100
Total	N/A	N/A	242	221	21	0	91.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  T  N  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_4208   1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGCCTCCATCAGCAGTACTAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.3% (221/242)  IGHV4-4*02   49   .......................C.......G..............G...........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  N  A  N  L  N  P  S  L  R  S  R  L  S  I  S  V  D  K  S  K 
                    Query_4208   91   GAGTGGATTGGAGAAATATATCATAGTGGGAATGCCAACCTCAACCCGTCCCTCAGGAGTCGTCTTAGCATCTCAGTAGACAAGTCCAAG  180
V  91.3% (221/242)  IGHV4-4*02   139  ...........G.....C.............GCA.....TA..............A......AG.C.C...A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  Y  R  T  S  V  G  G  I 
                    Query_4208   181  AACCAATTCTCCCTGAAGCTGAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGCAGGATATCGAACATCAGTGGGTGGAATA  270
V  91.3% (221/242)  IGHV4-4*02   229  .....G.................C..........................G.....C.....----------------------------  290
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  90.0% (9/10)     IGHD6-19*01  9    ----------------------------------------------------------------------------......C...----  18

                                      -------------->                                 
                                       H  A  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4208   271  CACGCTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  100.0% (41/41)   IGHJ6*02     22   -------.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_50366

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            333     1e-93
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGGCGTC	AGPKYGVFGLGV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4209   1    ACCCTTTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.8% (228/243)  IGHV4-4*02   49   .....G.............C........................T..T..........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  R  S  E 
                    Query_4209   91   GAGTGGATTGGGGAGATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCAAGTCTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  93.8% (228/243)  IGHV4-4*02   139  ..............A....A..A..............A...................AG............A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  M  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_4209   181  AACCAGTTCTCCCTGATGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  93.8% (228/243)  IGHV4-4*02   229  ................A.....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  95.7% (44/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       G  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4209   271  GGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  95.7% (44/46)    IGHJ6*02     24   .A.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_50364

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           405     3e-115
IGHD3-10*01                                                                                           44.9    5e-09 
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGATA	G	ATTACTATGGTTCGGGGAGTTTTTAT	TACGGTTGGAAAA	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGATAGATTACTATGGTTCGGGGAGTTTTTATTACGGTTGGAAAAACTATGGTATGGACGTC	ARIDYYGSGSFYYGWKNYGMDV	263	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	45	1	0	97.8
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	113	1	0	99.1
CDR3-IMGT (germline)	263	271	9	9	0	0	100
Total	N/A	N/A	271	265	6	0	97.8


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  A  S  G  M  C  V  S  W  I  R
                    Query_4210   1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCAGGATTCTCACTCAGCGCTAGTGGAATGTGTGTGAGCTGGATCCG  90
V  97.8% (265/271)  IGHV2-70*01  30   .............................................T..G............A............................  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  R  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T
                    Query_4210   91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACTCATTGATCGAGATGATGATAAATACTACAGCACATCTCTGAAGACCAGGCTCAC  180
V  97.8% (265/271)  IGHV2-70*01  120  ...........................................T.G............................................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  K  D  T  S  K  K  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  I
                    Query_4210   181  CATCTCCAAGGACACCTCCAAAAAGCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACGTATTACTGTGCACGGAT  270
V  97.8% (265/271)  IGHV2-70*01  210  ........................C.................................................................  299
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  I

                                      ---------------------CDR3-IMGT--------------------------->                              
                                        D  Y  Y  G  S  G  S  F  Y  Y  G  W  K  N  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_4210   271  AGATTACTATGGTTCGGGGAGTTTTTATTACGGTTGGAAAAACTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  358
V  97.8% (265/271)  IGHV2-70*01  300  .---------------------------------------------------------------------------------------  300
                                                                                                                              
D  96.2% (25/26)    IGHD3-10*01  3    --.....................A....------------------------------------------------------------  28
J  97.9% (46/47)    IGHJ6*02     13   -----------------------------------------....C..........................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_50365

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           406     1e-115
IGHD1-26*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCTTCT	TGGGAGCT	TTGTGTCGCCCCGGGGACACGCCAATA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CTTCTTGGGAGCTTTGTGTCGCCCCGGGGACACGCCAATAAC	LLGSFVSPRGHANN	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	73	1	0	98.6
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	287	113	107	6	0	94.7
Total	N/A	N/A	286	273	13	0	95.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_4211   2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  91
V  95.5% (273/286)  IGHV5-51*03  2    ..G.......................................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  H  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  T  I  Y  P  G  D  S  D  T  R  Y  
                    Query_4211   92   CCCACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGTTGGGAACCATCTATCCTGGTGACTCTGATACCAGATACA  181
V  95.5% (273/286)  IGHV5-51*03  92   G.T.........G.....................................A....G.T................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  P  F  Q  G  H  V  T  I  S  A  D  T  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  A  
                    Query_4211   182  GCCCGCCCTTCCAAGGCCACGTCACCATCTCAGCCGACACGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGCCC  271
V  95.5% (273/286)  IGHV5-51*03  182  .....T.............G...................A........G......................................A.A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      P  A  M  Y  Y  C  L  L  G  S  F  V  S  P  R  G  H  A  N  N  W  G  Q  G  T  L  V  T  V  S  
                    Query_4211   272  CCGCCATGTATTACTGCCTTCTTGGGAGCTTTGTGTCGCCCCGGGGACACGCCAATAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  361
V  95.5% (273/286)  IGHV5-51*03  272  ................--------------------------------------------------------------------------  287
                                      T  A  M  Y  Y                                                                             
D  100.0% (8/8)     IGHD1-26*01  8    ----------------------........------------------------------------------------------------  15
J  100.0% (36/36)   IGHJ4*02     13   ---------------------------------------------------------.................................  45

                                         
                                      S  
                    Query_4211   362  CAG  364
J  100.0% (36/36)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_30614

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_4212   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_4212   91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y 
                    Query_4212   181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTAC  270
V  91.4% (223/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD2-2*01   8    ---------------------------------------------------------------------........T........----  24
J  88.5% (46/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_4212   271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  318
J  88.5% (46/52)    IGHJ6*02     15   ...GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_30615

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           358     4e-101
IGHD3-22*01                                                                                           27.6    7e-04 
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	CAGG	ACTATGATAGTAGT	AGGGGGG	ACGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAGGACTATGATAGTAGTAGGGGGGACGATAAGGACGTC	VRQDYDSSRGDDKDV	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4213   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (239/249)  IGHV4-31*03  49   ................................................G.........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  S  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  S  M  S  V  D  T  S 
                    Query_4213   91   CTGGAGTGGATTGGATACATCTATTCCAGTGGGAGTACCTACTACAACCCGTCCCTCAAGAGTCGAGTTAGCATGTCCGTAGACACGTCT  180
V  96.0% (239/249)  IGHV4-31*03  139  ..............G..........A.........C..................................C...A..A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  H  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  Q  D  Y  D  S  S  R 
                    Query_4213   181  AAGAACCACTTCTCCCTGAACCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGTGAGACAGGACTATGATAGTAGTAGG  270
V  96.0% (239/249)  IGHV4-31*03  229  ........G...........G...........................................C....---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (14/14)   IGHD3-22*01  6    -------------------------------------------------------------------------..............---  19

                                      ----------------->                                 
                                       G  D  D  K  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4213   271  GGGGACGATAAGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  321
J  95.7% (45/47)    IGHJ6*02     16   ----...G..T........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_30616

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           427     1e-121
IGHD2-15*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAGCGTT	AGGACATTGT	GTTAGAAGCACTTGCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGCGTTAGGACATTGTGTTAGAAGCACTTGCGACTACGGTATGGACGTC	ATALGHCVRSTCDYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	280	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_4214   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTA  90
V  97.6% (280/287)  IGHV5-51*01  6    ......................................................................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  H  P  G  D  S  D  T  R  Y  S  P
                    Query_4214   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCCATCCTGGGGACTCTGATACCAGATACAGTCC  180
V  97.6% (280/287)  IGHV5-51*01  96   ..........................................................T.......T....................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4214   181  GTCTTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (280/287)  IGHV5-51*01  186  ...C.........................................C....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  T  A  L  G  H  C  V  R  S  T  C  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T
                    Query_4214   271  CATGTATTACTGTGCGACAGCGTTAGGACATTGTGTTAGAAGCACTTGCGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCAC  360
V  97.6% (280/287)  IGHV5-51*01  276  .................-------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                           
D  90.0% (9/10)     IGHD2-15*01  1    ------------------------....T.....--------------------------------------------------------  10
J  100.0% (50/50)   IGHJ6*02     13   --------------------------------------------------........................................  52

                                                
                                        V  S  S 
                    Query_4214   361  CGTCTCCTCA  370
J  100.0% (50/50)   IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_50369

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           371     6e-105
IGHD6-25*01                                                                                           12.2    31    
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTTGGGCCC	GCGGCT	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTTGGGCCCGCGGCTGGTATGGACGTC	ARDVGPAAGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  M  R  S  G  G  Y  Y  W  S  W  I  R  Q  R  P  G  K  G 
                    Query_4215   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATGAGGAGTGGTGGATACTACTGGAGCTGGATCCGCCAGCGCCCAGGGAAGGGC  90
V  97.2% (244/251)  IGHV4-31*01  49   ...............................G......C..C........T.........................A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  I  D  T  S 
                    Query_4215   91   CTGGAGTGGATTGGGAACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAATAGACACGTCT  180
V  97.2% (244/251)  IGHV4-31*01  139  ...............T..............................................................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  V  G  P  A  A  G 
                    Query_4215   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGTTGGGCCCGCGGCTGGT  270
V  97.2% (244/251)  IGHV4-31*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD6-25*01  11   ---------------------------------------------------------------------------------......---  16
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4215   271  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  312
J  100.0% (45/45)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_30610

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           396     2e-112
IGHD4-17*01                                                                                           16.1    2.6   
IGHJ1*01                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD4-17*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGG	ACGGTGAC	GCTCTTTTGCGAGA	TGAAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGACGGTGACGCTCTTTTGCGAGATGAATACTTCCAACAC	ARRDGDALLRDEYFQH	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	103	11	0	90.4
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	274	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  A  Y  S  F  T 
                    Query_4216   1    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCTTGTAAAGGTTCTGCATACAGCTTTACC  90
V  92.9% (274/295)  IGHV5-51*01  1    .....G........G...............................................C.....G.......G.............  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  G  D  S  D  A  R  Y 
                    Query_4216   91   AACTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGCATCATCTTTCCTGGTGACTCTGATGCCAGATAC  180
V  92.9% (274/295)  IGHV5-51*01  91   .G...........G..........................................G.......A................A........  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  S  F  Q  G  H  I  T  L  S  A  D  K  S  V  S  T  V  Y  L  Q  W  R  S  L  R  A  P  A 
                    Query_4216   181  AGCCCGTCCTTCCAAGGCCACATCACCCTCTCAGCCGACAAGTCCGTCAGCACCGTCTACCTGCAGTGGAGGAGCCTGAGGGCCCCCGCC  270
V  92.9% (274/295)  IGHV5-51*01  181  ....................GG.....A.................A.........C...............C.......A....T.G.A.  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  I  Y  Y  C  A  R  R  D  G  D  A  L  L  R  D  E  Y  F  Q  H  W  G  Q  G  T  L  V  T 
                    Query_4216   271  ACCGCCATATATTACTGTGCGAGACGGGACGGTGACGCTCTTTTGCGAGATGAATACTTCCAACACTGGGGCCAGGGAACCCTGGTCACC  360
V  92.9% (274/295)  IGHV5-51*01  271  ........G................-----------------------------------------------------------------  295
                                       T  A  M  Y  Y  C  A  R                                                                   
D  100.0% (8/8)     IGHD4-17*01  6    ----------------------------........------------------------------------------------------  13
J  96.0% (48/50)    IGHJ1*01     3    --------------------------------------------------............G..............C............  42

                                                
                                       V  S  S  
                    Query_4216   361  GTCTCCTCAG  370
J  96.0% (48/50)    IGHJ1*01     43   ..........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_30611

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD1-1*01                                                                                            14.1    9.2   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GGGAGGGGG	CAACTGG	GAACCCTTTAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTAC	ARGGGNWEPFTY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	288	267	21	0	92.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  Y
                    Query_4217   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCTA  90
V  92.7% (267/288)  IGHV5-51*01  6    .................................................................G............C......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  L  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  I  V  F  P  D  D  S  D  T  R  Y  S  P
                    Query_4217   91   CTGGCTCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGATCGTTTTTCCTGATGACTCTGATACCAGATACAGCCC  180
V  92.7% (267/288)  IGHV5-51*01  96   ....A.............C..G.........A..........G............A.C.A.....G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  I  T  I  S  A  D  K  S  I  T  T  A  F  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_4217   181  GTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCACCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACACCGC  270
V  92.7% (267/288)  IGHV5-51*01  186  .......C.......GG...........................G........A...........G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  G  N  W  E  P  F  T  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4217   271  CATCTATTACTGTGCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.7% (267/288)  IGHV5-51*01  276  ...G...........G..-----------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------.......-------------------------------------------------  11
J  100.0% (38/38)   IGHJ4*02     11   ---------------------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_11922

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           378     3e-107
IGHD1-26*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGTCTA	TGGGAGCT	GGGAAGTTCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGTCTATGGGAGCTGGGAAGTTCTTTTGACTAC	ARGLWELGSSFDY	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	102	27	23	1	3	85.2
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	103	11	0	90.4
CDR3-IMGT (germline)	292	296	5	5	0	0	100
Total	N/A	N/A	296	271	22	3	91.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><--------CDR1-I
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_4218   1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  90
V  91.6% (271/296)  IGHV1-69*06  1    ...G...................G..................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      MGT--------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--
                                       S  S  F  A  V  N  W  V  R  Q  A  P  R  Q  G  I  E  W  M  G  G  I  V  P  F  F  D  T  T  N 
                    Query_4218   91   AGCAGTTTTGCTGTCAACTGGGTGCGACAGGCCCCTAGACAAGGGATTGAGTGGATGGGAGGGATCGTCCCTTTCTTTGATACAACAAAC  180
V  91.6% (271/296)  IGHV1-69*06  91   ...---.A....A...G...................G........C....................A.....A......G....G.....  177
                                       S     Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N 

                                      --------------------------------------------------FR3-IMGT--------------------------------
                                       F  A  Q  K  F  Q  G  R  V  T  F  T  A  D  K  S  T  T  T  A  Y  I  E  L  S  D  R  R  S  E 
                    Query_4218   181  TTCGCACAGAAGTTCCAGGGCAGAGTCACTTTTACCGCGGACAAATCGACGACCACAGCCTACATCGAGCTTAGCGACCGCAGATCTGAG  270
V  91.6% (271/296)  IGHV1-69*06  178  .A...........................GA................C....G............G.....G...AG..TG.........  267
                                       Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E 

                                      --------------------><--------------CDR3-IMGT-------------->                              
                                       D  T  A  V  Y  Y  C  A  R  G  L  W  E  L  G  S  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_4218   271  GACACGGCCGTGTATTACTGTGCGAGGGGTCTATGGGAGCTGGGAAGTTCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  360
V  91.6% (271/296)  IGHV1-69*06  268  ..........................----------------------------------------------------------------  293
                                       D  T  A  V  Y  Y  C  A                                                                   
D  100.0% (8/8)     IGHD1-26*01  8    ---------------------------------........-------------------------------------------------  15
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------------------------.......................................  44

                                          
                                       S  
                    Query_4218   361  TCAG  364
J  100.0% (43/43)   IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_329973

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           378     3e-107
IGHD3-16*01                                                                                           12.2    37    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACTTCTCCCCGGGTCCCCC	TGGGGG	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACTTCTCCCCGGGTCCCCCTGGGGGCCCTTTGACTCT	ARTLLPGSPWGPFDS	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	65	6	0	91.5
CDR1-IMGT	79	102	24	18	6	0	75
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	103	11	0	90.4
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  A  V  R  R  P  G  E  S  L  T  I  S  C  Q  G  S  G  Y  R  V  P  T  
                    Query_4219   8    TGCAGCTGGTGCAGTCTGGAGCAGCGGTGAGAAGGCCCGGGGAGTCTCTGACGATTTCCTGTCAGGGTTCTGGATACAGAGTTCCCACCC  97
V  91.7% (266/290)  IGHV5-51*01  5    ........................A.....A..A.................A...C......A................CT..A...G.T  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      H  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  
                    Query_4219   98   ATTGGATCGGGTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCC  187
V  91.7% (266/290)  IGHV5-51*01  95   .C........C......................................................................G........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  V  N  T  A  Y  L  Q  W  S  S  R  R  A  S  D  T  
                    Query_4219   188  CGTCCTTCCAAGGCCAGGTCACCATCTCTGTCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCAGTCGGAGGGCCTCGGACACCG  277
V  91.7% (266/290)  IGHV5-51*01  185  ............................A.C..........A...G........................C.T..A..............  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------CDR3-IMGT----------------->                               
                                      A  T  Y  F  C  A  R  T  L  L  P  G  S  P  W  G  P  F  D  S  W  G  Q  G  T  L  V  T  V  S  
                    Query_4219   278  CCACATATTTCTGTGCGAGAACACTTCTCCCCGGGTCCCCCTGGGGGCCCTTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  367
V  91.7% (266/290)  IGHV5-51*01  275  ...TG....A..........----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  17   -----------------------------------------......-------------------------------------------  22
J  95.5% (42/44)    IGHJ4*02     5    -------------------------------------------------........AC...............................  45

                                         
                                      S  
                    Query_4219   368  CAG  370
J  95.5% (42/44)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_213417

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           325     3e-91
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGCG	GGCTGG	G	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCTGGGAACTGGTTCGACCCC	ARGRRAGNWFDP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  V  P  G  K  G 
                    Query_4220   1    ACCCTGTCCCTCACCTGCAGTGTCTCAGGTGGCTCCATCAGTAGTGGGGCTTACTACTGGAGTTGGATCCGCCAGGTCCCAGGGAAGGGC  90
V  91.6% (229/250)  IGHV4-31*01  49   ...................C......T..............C.....T.G............C............CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  E  N  T  Q  Y  N  P  S  L  K  S  L  V  T  I  S  G  D  T  S 
                    Query_4220   91   CTGGAGTGGATTGGATACATCTATTACGGTGAGAATACCCAGTACAACCCGTCCCTCAAGAGTCTGGTTACCATATCAGGAGACACCTCT  180
V  91.6% (229/250)  IGHV4-31*01  139  ..............G............A...G..GC...T.C.......................A.............T......G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       T  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  W 
                    Query_4220   181  ACGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCTGGGAACTGG  270
V  91.6% (229/250)  IGHV4-31*01  229  .A.................A.................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------......-------  18
J  93.9% (46/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  D  P  W  G  H  G  I  L  V  T  V  T  S  
                    Query_4220   271  TTCGACCCCTGGGGCCACGGAATCCTGGTCACCGTCACCTCAG  313
J  93.9% (46/49)    IGHJ5*02     9    .................G....C.............T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_329971

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     9e-100
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATCGTGGTG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATCGTGGTGACTACTTTGACCAC	ARGLHYYDRGDYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  R  V  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4221   1    ACCCTGTCCCTCACCTGCACTGTCTCTCGTGTCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.2% (238/250)  IGHV4-31*03  49   ...........................G...G...................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_4221   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAATAAGTCCCTCAAGAGTCGAATTACCATATCGGTAGACACGTCT  180
V  95.2% (238/250)  IGHV4-31*03  139  ..................................G............CCC................G..........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R 
                    Query_4221   181  AAGAACCAGTTCTCCCTGACGCTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCCATTACTATGATCGT  270
V  95.2% (238/250)  IGHV4-31*03  229  ...................A.....G...........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (16/18)    IGHD3-22*01  3    ----------------------------------------------------------------------------...........A..  16

                                      ----------------->                                  
                                       G  D  Y  F  D  H  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_4221   271  GGTGACTACTTTGACCACTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  322
D  88.9% (16/18)    IGHD3-22*01  17   A...------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    ----...........T....................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_329970

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            397     8e-113
IGHD3-10*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGAC	TGGTTCGGGGA	CTT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTAC	ARVTGSGTYSFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  G  S  Y
                    Query_4222   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCGGCAGCTA  90
V  93.8% (272/290)  IGHV1-8*02   6    ..................G...............................................................AC......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  D  Y  A  Q
                    Query_4222   91   TGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATGAATCCTAACAGTGGGAACACAGACTATGCACA  180
V  93.8% (272/290)  IGHV1-8*02   96   .........................A..................................C...........T.......G.........  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  Y  M  E  L  S  S  L  G  S  A  D  T  A
                    Query_4222   181  GAAGTTCCGGGGCAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCTACATGGAGCTGAGTAGTCTGGGATCTGCCGACACGGC  270
V  93.8% (272/290)  IGHV1-8*02   186  ........A.......................A...C..C.T........................C..C...A......AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  V  T  G  S  G  T  Y  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4222   271  CGTCTATTACTGTGCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  93.8% (272/290)  IGHV1-8*02   276  ...G................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (11/11)   IGHD3-10*01  10   ------------------------...........---------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    --------------------------------------...A......C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_329977

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           400     9e-114
IGHD5-12*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTAAACGAAA	ATAGTGGCTACGATTA	TGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTAAACGAAAATAGTGGCTACGATTATGCTGACTAC	ARLNENSGYDYADY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	272	16	0	94.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  A  S  Y 
                    Query_4223   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTGCCAGCTAC  91
V  94.4% (272/288)  IGHV1-18*04  7    ............................................................................C....A........  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  F  S  T  Y  N  G  D  T  N  Y  A  Q 
                    Query_4223   92   TCTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGTCTTGAGTGGATGGGACGGTTCAGCACTTACAATGGTGACACAAATTATGCACAG  181
V  94.4% (272/288)  IGHV1-18*04  97   GG.A...............................G...............T..A.....G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_4223   182  AACCTCCAGGGCAGAGTCACCCTGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTTAGATCTGACGACACGGCC  271
V  94.4% (272/288)  IGHV1-18*04  187  ..G..................A.................................................G..................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                
                                       V  Y  Y  C  A  R  L  N  E  N  S  G  Y  D  Y  A  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4223   272  GTTTATTATTGTGCGAGATTAAACGAAAATAGTGGCTACGATTATGCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  357
V  94.4% (272/288)  IGHV1-18*04  277  ..G.....C.........--------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                     
D  100.0% (16/16)   IGHD5-12*01  7    ----------------------------................------------------------------------------  22
J  100.0% (39/39)   IGHJ4*02     8    -----------------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_213413

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            394     7e-112
IGHD3-10*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGAC	TGGTTCGGGGA	CTT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTAC	ARVTGSGTYSFDY	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	102	12	0	89.5
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	294	273	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  G  
                    Query_4224   2    AGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCGGCG  91
V  92.9% (273/294)  IGHV1-8*02   2    ....G........G........G...............................................................AC.A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      G  Y  D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  D  Y  
                    Query_4224   92   GCTATGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATGAATCCTAACAGTGGGAACACAGACTATG  181
V  92.9% (273/294)  IGHV1-8*02   92   .............................A..................................C...........T.......G.....  181
                                      S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  K  F  R  G  R  V  T  M  A  R  N  T  S  T  S  T  A  Y  M  E  L  S  S  L  G  S  A  D  
                    Query_4224   182  CACAGAAGTTCCGGGGCAGAGTCACCATGGCCAGGAACACGTCTACAAGCACAGCCTACATGGAGCTGAGTAGTCTGGGATCTGCCGACA  271
V  92.9% (273/294)  IGHV1-8*02   182  ............A................A..........C..C.T........................C..C...A......AG....  271
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  A  V  Y  Y  C  A  R  V  T  G  S  G  T  Y  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4224   272  CGGCCGTCTATTACTGTGCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  361
V  92.9% (273/294)  IGHV1-8*02   272  .......G................------------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                    
D  100.0% (11/11)   IGHD3-10*01  10   ----------------------------...........---------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    ------------------------------------------...A......C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_213410

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           311     4e-87
IGHD6-13*01                                                                                           12.2    31   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGACACTGCAC	TATAGC	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGACACTGCACTATAGCCCCTTTGACTAC	ARGTLHYSPFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	223	24	0	90.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  D  N  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4225   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGGTTCGACAACTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.3% (223/247)  IGHV3-33*01  47   ....................................CC...AGT.G.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  A  V  I  L  S  D  G  T  S  T  N  Y  I  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4225   91   ACTGGGTGGCAGTTATATTGTCTGATGGAACCAGTACAAATTATATAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  90.3% (223/247)  IGHV3-33*01  137  .G................G..A........GT.A..A.T.C...GC............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  T  L  H  Y  S  P  
                    Query_4225   181  AGAATACGCTTTATCTGCAATTGAACAGCCTCAGAGTCGAGGACACGGCTGTCTATTACTGTGCGAGGGGGACACTGCACTATAGCCCCT  270
V  90.3% (223/247)  IGHV3-33*01  227  ....C.....G.........A..........G....C...............G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD6-13*01  4    --------------------------------------------------------------------------------......----  9
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4225   271  TTGACTACTGGGGCCAGGGAACCCTGGTTACCGTCTCGTCAG  312
J  95.5% (42/44)    IGHJ4*02     7    ............................C........C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_329974

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           388     5e-110
IGHD1-1*01                                                                                            14.1    9.2   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAGGGGG	CAACTGG	GACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTAC	ARGGGNWDPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	268	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  Y
                    Query_4226   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCTA  90
V  93.1% (268/288)  IGHV5-51*01  6    .................................................................G............C......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  V  V  Y  P  D  D  S  D  A  R  Y  S  P
                    Query_4226   91   CTGGATCGGCTGGGTGAGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGGTCGTCTATCCTGATGACTCTGATGCCAGATACAGCCC  180
V  93.1% (268/288)  IGHV5-51*01  96   ................C.C..G.........A..........G.........A..A.........G..........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  I  T  I  S  A  D  K  S  I  S  T  A  F  L  Q  W  N  S  L  K  A  S  D  P  A
                    Query_4226   181  GTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACCCCGC  270
V  93.1% (268/288)  IGHV5-51*01  186  .......C.......GG....................................A...........G...................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  G  N  W  D  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4226   271  CATCTATTACTGTGCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.1% (268/288)  IGHV5-51*01  276  ...G..............-----------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------.......-------------------------------------------------  11
J  100.0% (44/44)   IGHJ4*02     5    ---------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_329979

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         350     8e-99
IGHD6-13*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGTGGGGTGCGTTATGC	CAGCAGCTGGTAC	GG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTGGGGTGCGTTATGCCAGCAGCTGGTACGGCTAC	ARGGVRYASSWYGY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	235	11	0	95.5


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  L 
                    Query_4227     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCATCAGCAGTGGTTACTACTGGGGCTGGCTCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  95.5% (235/246)  IGHV4-38-2*01  49   ...............................................................A..........................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  T  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 
                    Query_4227     91   GAGTGGATTGGGACCATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACTATGTCAGTAGACACGTCCAAG  180
V  95.5% (235/246)  IGHV4-38-2*01  139  .............GT................G....................................C..A..................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  G  G  V  R  Y  A  S  S 
                    Query_4227     181  AACCACTTCTCCCTAAAGCTGAGCTCTGTGACGGCCGCTGACACGGCCGTGTTTTACTGTGCGAGAGGTGGGGTGCGTTATGCCAGCAGC  270
V  95.5% (235/246)  IGHV4-38-2*01  229  .....G........G.................C.....A.............A.............------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-13*01    9    -----------------------------------------------------------------------------------.......  15

                                        ----------->                                
                                         W  Y  G  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4227     271  TGGTACGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
D  100.0% (13/13)   IGHD6-13*01    16   ......--------------------------------------  21
J  100.0% (36/36)   IGHJ4*02       11   --------....................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_329978

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           240     2e-65
IGHD2-21*02                                                                                           14.1    8.4  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CACTGAGAGGGGAGGCC	GACGGCTATT	TT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACTGAGAGGGGAGGCCGACGGCTATTTTTACTACGGTATGGACGTC	ATLRGEADGYFYYGMDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	91	23	0	79.8
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	197	44	0	81.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  N  W  S  S  S  G  Y  Y  W  N  W  V  R  Q  R  P  G  Q  G  L  E 
                    Query_4228   1    ACCCTGTCCCTCACCTGCACTGTCTACAATTGGTCCTCCAGTGGTTACTATTGGAACTGGGTACGGCAGCGCCCCGGTCAGGGGCTGGAG  90
V  81.7% (197/241)  IGHV4-34*01  49   ..................G.......TGG.G......T............C....G....A.C..C....C...A..GA...........  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  T  W  Y  N  P  T  L  E  G  R  A  T  I  S  V  G  R  S  N  N 
                    Query_4228   91   TGGATTGGCGAAATCAGTCATAGTGGGTCCACGTGGTATAATCCGACCCTCGAGGGTCGAGCCACCATATCAGTGGGCAGGTCCAACAAT  180
V  81.7% (197/241)  IGHV4-34*01  139  ........G.......A.........AAG...CAAC..C..C...T.....A..A......T............A.A..C......G..C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       V  F  S  L  R  L  T  S  V  T  A  A  D  T  S  V  Y  Y  C  A  T  L  R  G  E  A  D  G  Y  F 
                    Query_4228   181  GTCTTCTCCCTGAGGTTGACCTCCGTGACCGCCGCGGACACGTCTGTCTATTACTGTGCGACACTGAGAGGGGAGGCCGACGGCTATTTT  270
V  81.7% (197/241)  IGHV4-34*01  229  CAG..........A.C...G...T..................G....G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.0% (9/10)     IGHD2-21*02  17   ------------------------------------------------------------------------------...T......--  26

                                      ----------------->                                 
                                       Y  Y  G  M  D  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_4228   271  TACTACGGTATGGACGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCCTCA  321
J  98.0% (50/51)    IGHJ6*02     12   .................................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_213418

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           344     6e-97
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	C	TATAGCAGTGGCTGG	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGACTATAGCAGTGGCTGGTACTTTGACTAC	ARDYSSGWYFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4229   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTACTTTCAGTAGCTACTGGATACACTGGGTCCGCCAAGCTCCAGGAAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-74*01  47   ..................................C..C.................G.......................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  I  T  R  D  E  I  G  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4229   91   AGTGGGTCTCACGTATTACTAGAGATGAGATTGGCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-74*01  137  T.................A...T....G..G.A......G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  S  S  G  W  Y  
                    Query_4229   181  AGAATACGGTGTATCTGCAAATGAACAGTCTCAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGGGACTATAGCAGTGGCTGGTACT  270
V  94.0% (235/250)  IGHV3-74*01  227  ....C...C......................G...................................A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD6-19*01  4    -----------------------------------------------------------------------...............----  18
J  97.8% (45/46)    IGHJ4*02     3    --------------------------------------------------------------------------------------....  6

                                      ------->                                  
                                      F  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4229   271  TTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.8% (45/46)    IGHJ4*02     7    ...............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_213419

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           336     1e-94
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ5*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACGC	GCAGTGGTTGGT	CTAGAGGAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACGCGCAGTGGTTGGTCTAGAGGATACAACTGGTTCGACCCC	ARTRSGWSRGYNWFDP	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4230   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  94.2% (229/243)  IGHV4-59*01  49   ...........................................G............C.................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  D  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  S  I  S  G  D  T  S  K  N 
                    Query_4230   91   TGGATTGGATATATCTATGACAGTGGGAACACCAACTATAATCCCTCCCTCAAGAGTCGAGTCAGCATCTCAGGAGACACGTCCAAGAAC  180
V  94.2% (229/243)  IGHV4-59*01  139  ........G.........T.........G.........C..C......................C...A....T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  F  Y  Y  C  A  R  T  R  S  G  W  S  R  G  Y 
                    Query_4230   181  CAGTTCTCCCTGAAACTGAGCTCTGTGACCGCTGCGGACACGGCCTTTTATTACTGTGCGAGAACGCGCAGTGGTTGGTCTAGAGGATAC  270
V  94.2% (229/243)  IGHV4-59*01  229  ..............G..............................G.G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD6-19*01  8    -------------------------------------------------------------------.......C....-----------  19
J  98.0% (50/51)    IGHJ5*02     1    ----------------------------------------------------------------------------------------..  2

                                      -------------->                                  
                                       N  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_4230   271  AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  319
J  98.0% (50/51)    IGHJ5*02     3    .....................................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_294102

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           315     5e-88
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGAGGAG	TATTGTAATAGTA	AAGGCTGCTTTCCGTC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGAGGAGTATTGTAATAGTAAAGGCTGCTTTCCGTCCTGGTTCGACCCC	ARAEEYCNSKGCFPSWFDP	237	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	20	4	0	83.3
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	107	7	0	93.9
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	231	216	15	0	93.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  D  Y  N  M  I  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  C  I  
                    Query_4231   13   GTGCAGCCTCTGGATTCACCTTCAGTGACTATAATATGATCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATGCATTA  102
V  93.5% (216/231)  IGHV3-21*01  65   ..........................AG.....GC....A....G.......................................C.....  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  S  S  N  Y  I  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_4231   103  GTAGTAGTAGTAATTACATATACTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGC  192
V  93.5% (216/231)  IGHV3-21*01  155  ............G......................G......................................................  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-----------------------CDR3-IMGT-------------
                                      Q  M  N  S  L  R  A  D  D  A  G  I  Y  Y  C  A  R  A  E  E  Y  C  N  S  K  G  C  F  P  S  
                    Query_4231   193  AAATGAACAGCCTGAGAGCCGACGACGCGGGTATATATTACTGCGCGAGAGCGGAGGAGTATTGTAATAGTAAAGGCTGCTTTCCGTCCT  282
V  93.5% (216/231)  IGHV3-21*01  245  ......................G...A...C.G.G........T.......---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  92.3% (12/13)    IGHD2-2*01   5    -----------------------------------------------------------.......G.....------------------  17
J  100.0% (47/47)   IGHJ5*02     5    ----------------------------------------------------------------------------------------..  6

                                      ---------->                                  
                                      W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4231   283  GGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (47/47)   IGHJ5*02     7    .............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_249989

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           344     6e-97
IGHD2-15*01                                                                                           12.2    32   
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTTCGAAGATGCGAATTCGGCG	GGATAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTTCGAAGATGCGAATTCGGCGGGATATTACTTTGACTCC	ARGFEDANSAGYYFDS	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  G  N  Y  Y  W  S  W  V  R  Q  H  P  G  K  G 
                    Query_4232   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACCAGTGGTAATTACTACTGGAGTTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  94.0% (235/250)  IGHV4-31*01  49   ........................................G.......GG............C...A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  T  P  S  L  Q  S  L  V  S  I  S  V  D  T  S 
                    Query_4232   91   CTGGAGTGGATTGGGTACATCTATCACAGTGGAAGCACCTACTACACCCCGTCCCTCCAGAGTCTAGTTTCCATATCAGTAGACACGTCT  180
V  94.0% (235/250)  IGHV4-31*01  139  ........................T.......G.............A..........A...........A....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  K  S  V  T  A  S  D  T  A  V  Y  Y  C  A  R  G  F  E  D  A  N  S 
                    Query_4232   181  AAGAATCAGTTCTCCCTGAAGCTGAAGTCTGTGACTGCCTCGGACACGGCCGTCTATTACTGTGCGAGAGGTTTCGAAGATGCGAATTCG  270
V  94.0% (235/250)  IGHV4-31*01  229  .....C...................GC............G.............G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      GT------------------>                                  
                                       A  G  Y  Y  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4232   271  GCGGGATATTACTTTGACTCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  325
D  100.0% (6/6)     IGHD2-15*01  2    ---......----------------------------------------------  7
J  95.7% (44/46)    IGHJ4*02     3    ---------..........A..............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_294105

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           366     2e-103
IGHD3-16*01                                                                                           14.1    7.9   
IGHJ4*02                                                                                              60.3    2e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	CGAGG	GTTTGGG	CTTT	GGCCA	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	245	11	0	95.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  V  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4233   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTACGTCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.7% (245/256)  IGHV3-15*01  47   .......T.............................T......A...C.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  S  D  G  G  T  T  D  Y  T  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_4233   91   AGTGGGTTGGCCGTATTAAAAGCAAAAGTGATGGTGGGACAACAGACTACACTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  95.7% (245/256)  IGHV3-15*01  137  ...........................C......................G.......................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT---------------------------------------------------->                      
                                      D  S  N  S  T  L  F  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  D  E  G  L  G  
                    Query_4233   181  ATTCAAACAGCACGCTGTTTCTGCAAATGAACAGCCTAAAAACCGAGGACACGGCCGTGTATTACTGTACCACAGACGAGGGTTTGGGCT  270
V  95.7% (245/256)  IGHV3-15*01  227  .......A.A........A..................G..............A.......................--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (7/7)     IGHD3-16*01  14   ---------------------------------------------------------------------------------.......--  20

                                                                       
                                      F  G  Q  G  T  L  V  T  V  S  S  
                    Query_4233   271  TTGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (31/31)   IGHJ4*02     18   --...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_175230

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD2-15*01                                                                                           21.8    0.041
IGHJ3*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGG	GGATATAGTAGTGG	CTGCTGCCACCGTTC	TTGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGGGATATAGTAGTGGCTGCTGCCACCGTTCTTGCTGTC	ARDQGDIVVAAATVLAV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  G  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_4234   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTGGTTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ......................................C...A...A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  F  Y  S  E  S  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  A  S  K  K 
                    Query_4234   91   TGGATTGGGCATATCTTTTACAGTGAGAGTACCAGCTATAACCCCTCCCTCAAGAGTCGAGTCACTATATCAGTAGACGCGTCCAAGAAG  180
V  93.5% (229/245)  IGHV4-59*01  139  .........T......A........G...C....A...C..........................C............A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  G  D  I  V  V  A  A 
                    Query_4234   181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATCAGGGGGATATAGTAGTGGCTGCT  270
V  93.5% (229/245)  IGHV4-59*01  229  ...................GC..........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD2-15*01  2    -----------------------------------------------------------------------......T.......-----  15

                                      ----------------->                                  
                                       A  T  V  L  A  V  W  G  Q  G  T  K  V  T  V  S  S  
                    Query_4234   271  GCCACCGTTCTTGCTGTCTGGGGCCAAGGGACAAAGGTCACCGTCTCTTCAG  322
J  95.2% (40/42)    IGHJ3*01     9    ----------...A....................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_249988

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           380     1e-107
IGHD3-16*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACAAGCGGGCGGCACC	TTTGGGG	CGAGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTAC	ARGQAGGTFGASDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  S  F  N  D  Y 
                    Query_4235   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAATGAAGGTCTCCTGCAAGGCTTCCGGTTACAGCTTTAACGACTAT  91
V  92.0% (266/289)  IGHV1-18*01  7    .............................................G......................T.......C.....C.AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  M  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  A  Y  N  G  N  T  K  Y  S  E 
                    Query_4235   92   GGTATCACTTGGATGCGACAGGCCCCTGGACAGGGGCCTGAGTGGATGGGATGGATCAGCGCATATAATGGTAACACAAAGTATTCAGAG  181
V  92.0% (266/289)  IGHV1-18*01  97   .......GC...G...................A....T........................T..C..............C...G..C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  L  Q  G  R  L  I  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_4235   182  AGGCTCCAGGGCAGACTCATCATGACCACAGACACATCCACGAGCACAGCCTACATGGAATTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.0% (266/289)  IGHV1-18*01  187  .A.............G...C.......................................GC.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  G  Q  A  G  G  T  F  G  A  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4235   272  GTCTATTATTGTGCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  92.0% (266/289)  IGHV1-18*01  277  ..G.....C..........---------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD3-16*01  15   ------------------------------------.......---------------------------------------------  21
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_158343

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         388     5e-110
IGHD3-16*01                                                                                           12.2    35    
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	ATTATG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATGACTACTTTGACTAC	ARHYDYFDY	289	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	68	3	0	95.8
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	104	10	0	91.2
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                        <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                           Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  R  G  F  G  Y  S  F  T  S  
                    Query_4236     5    TGCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGTTTTGGATACAGCTTTACCAGCT  94
V  92.8% (269/290)  IGHV5-10-1*01  5    .....................C.........................................A.....C....................  94
                                           Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  

                                        ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                        F  W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  F  D  S  S  T  D  Y  T  
                    Query_4236     95   TCTGGATCACTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAGAATTGATCCTTTTGACTCTTCTACCGACTATACGC  184
V  92.8% (269/290)  IGHV5-10-1*01  95   A........GC.........................................G..G.........AG........A....A....C.GC.  184
                                        Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  

                                        -------------------------------------------FR3-IMGT---------------------------------------
                                        P  S  F  Q  G  H  V  T  I  S  A  D  N  S  I  S  T  A  Y  L  H  L  S  S  L  K  A  S  D  T  
                    Query_4236     185  CGTCATTCCAAGGCCACGTCACCATCTCAGCTGACAACTCCATCAGTACTGCCTACCTGCACTTGAGCAGCCTGAAGGCCTCGGACACCG  274
V  92.8% (269/290)  IGHV5-10-1*01  185  ....C................................G........C..............G.G..........................  274
                                        P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                        -------------><--------CDR3-IMGT-------->                                  
                                        G  M  Y  Y  C  A  R  H  Y  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4236     275  GCATGTATTACTGTGCGAGACATTATGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  349
V  92.8% (269/290)  IGHV5-10-1*01  275  C...................-------------------------------------------------------  294
                                        A  M  Y  Y  C  A  R                                                        
D  100.0% (6/6)     IGHD3-16*01    3    ---------------------......------------------------------------------------  8
J  100.0% (48/48)   IGHJ4*02       1    ---------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_211827

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD3-3*01                                                                                            23.8    0.011
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCAATCGAGGC	TTTTGGAGTGGT	CGGGGGCCCCTTATCGC	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCAATCGAGGCTTTTGGAGTGGTCGGGGGCCCCTTATCGCTACTTCGATCTC	AREQSRLLEWSGAPYRYFDL	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_4237   1    ACCCTGTCCCTCACCTGCACTGTCTCGGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATTCGGCAGGCCCCAGGGAAGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   ..........................T...................................C......C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  Y  S  R  G  R  T  N  Y  N  P  A  L  T  T  R  V  T  I  S  A  D  S  S  K  N 
                    Query_4237   91   TGGATTGGATATTTCTATAGCAGAGGCAGGACGAACTACAACCCCGCCCTCACGACTCGAGTCACCATATCAGCAGACTCGTCCAAGAAC  180
V  92.2% (226/245)  IGHV4-59*01  139  ........G...A.....TA...T..G..C..C............T......A..G.................T....A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  Q  S  R  L  L  E  W  S 
                    Query_4237   181  CAGTTCTCCCTGAAGCTCAGCTCTGTTACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGAGCAATCGAGGCTTTTGGAGTGGTCG  270
V  92.2% (226/245)  IGHV4-59*01  229  .................G........G....................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD3-3*01   11   ----------------------------------------------------------------------------............--  22

                                      GT------------------------>                                  
                                       G  A  P  Y  R  Y  F  D  L  W  G  R  G  T  Q  V  T  V  S  S  
                    Query_4237   271  GGGGCCCCTTATCGCTACTTCGATCTCTGGGGCCGTGGCACCCAGGTCACTGTCTCCTCAG  331
J  97.8% (45/46)    IGHJ2*01     8    ---------------............................T.................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_158341

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD6-13*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	ARHRYLGPRQQATENDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  E  A  E  V  K  K  P  G  D  S  L  K  I  T  C  Q  G  S  G  Y  T  F  S  T  Y
                    Query_4238   1    GCAGCTGGTGCAGTCTGAAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCACCTGTCAGGGTTCTGGATACACCTTTTCCACCTA  90
V  94.8% (276/291)  IGHV5-51*01  6    .................G........................G............T.....A...............G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  V  I  Y  P  G  D  S  D  A  R  S  S  P
                    Query_4238   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGTTGGGAGTCATCTATCCTGGTGACTCTGATGCCAGATCCAGCCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ........G.....................................A....GA.......................A......A......  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4238   181  GTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  ......................A...........................................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_4238   271  CATGTATTACTGTGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  94.8% (276/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-13*01  8    ---------------------------------------.......--------------------------------------------  14
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_4238   361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_5185

Length=414
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           386     2e-109
IGHD2-21*02                                                                                           39.1    3e-07 
IGHJ4*02                                                                                              75.7    7e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACGAGAA	CATGTTGTGGTGGTGACTGTTATTCC	TGACGTCGTAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACGAGAACATGTTGTGGTGGTGACTGTTATTCCTGACGTCGTATACTACTTTGATGAG	ARVREHVVVVTVIPDVVYYFDE	291	356	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	74	1	0	98.7
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	100	14	0	87.7
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	271	24	0	91.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  S  F  S 
                    Query_4239   3    CAGATGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCTCCTTCAGC  92
V  91.9% (271/295)  IGHV1-69*06  1    ...G.............................................................................A........  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  V  I  S  W  L  R  Q  A  P  G  Q  G  L  E  W  V  G  G  I  I  P  I  F  P  T  A  E  Y 
                    Query_4239   93   AGTTATGTTATCAGTTGGCTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGGGGGATCATCCCTATCTTTCCTACAGCAGAATAC  182
V  91.9% (271/295)  IGHV1-69*06  91   ..C....C......C...G................................A....A..................GG.......A.C...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  Q  K  F  R  G  R  V  T  I  T  A  D  K  T  T  S  T  V  Y  M  E  M  S  S  L  R  S  E  D 
                    Query_4239   183  TCTCAGAAGTTCCGGGGCAGAGTGACTATTACCGCGGACAAAACCACGAGCACAGTGTACATGGAGATGAGTAGCCTGAGATCTGAGGAC  272
V  91.9% (271/295)  IGHV1-69*06  181  G.A..........A.........C..G...............T............CC.........C....C..................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------------------CDR3-IMGT--------------------------->      
                                       T  A  I  Y  Y  C  A  R  V  R  E  H  V  V  V  V  T  V  I  P  D  V  V  Y  Y  F  D  E  W  G 
                    Query_4239   273  ACGGCCATATATTACTGTGCGAGAGTACGAGAACATGTTGTGGTGGTGACTGTTATTCCTGACGTCGTATACTACTTTGATGAGTGGGGC  362
V  91.9% (271/295)  IGHV1-69*06  271  ......G.G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  92.3% (24/26)    IGHD2-21*02  3    ---------------------------------...A...............C......-------------------------------  28
J  93.8% (45/48)    IGHJ4*02     1    ----------------------------------------------------------------------..........CT.C......  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_4239   363  CAGGGAACCCTGGTCACCGTCTCCTCAG  390
J  93.8% (45/48)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40604112


Query= Query_16259

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           260     1e-71
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	93	21	0	81.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	205	39	0	84


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_4240   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  84.0% (205/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_4240   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  84.0% (205/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_4240   181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCACGTAT  270
V  84.0% (205/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_4240   271  GTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    ---------------------------------...G....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_5184

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           410     1e-116
IGHD6-25*01                                                                                           12.2    35    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TT	AGCGGC	GAAGGTAACCTTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTAGCGGCGAAGGTAACCTTATTGACTAC	AKLSGEGNLIDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  R  Y
                    Query_4241   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCAGGTA  90
V  95.2% (276/290)  IGHV5-51*01  6    ..................................................................T....................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  S  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  Y  D  V  R  Y  R  P
                    Query_4241   91   CTGGATCGGCTGGGTGAGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTATGATGTGAGATACAGACC  180
V  95.2% (276/290)  IGHV5-51*01  96   ................C......................................................C....ACC........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4241   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGCACCGCCTTTTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (276/290)  IGHV5-51*01  186  ...................................A.................ACC..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  K  L  S  G  E  G  N  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4241   271  CATTTATTACTGTGCGAAACTTAGCGGCGAAGGTAACCTTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.2% (276/290)  IGHV5-51*01  276  ...G.............G..---------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD6-25*01  10   ----------------------......-------------------------------------------------------  15
J  100.0% (42/42)   IGHJ4*02     7    -----------------------------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_249981

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4242   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ......................................C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_4242   91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P 
                    Query_4242   181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC  270
V  90.6% (221/244)  IGHV4-59*01  229  ...........G...C....C...........T............G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  95.7% (44/46)    IGHJ5*02     6    ------------------------------------------------------------------------------............  17

                                                                        
                                       W  G  Q  G  A  L  V  S  V  S  S  
                    Query_4242   271  TGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  304
J  95.7% (44/46)    IGHJ5*02     18   ............A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_5183

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           347     7e-98
IGHD2-2*01                                                                                            12.2    33   
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCCTAGGACCGGATAAAGACA	CAGCTG	AGGACGCCCTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCTAGGACCGGATAAAGACACAGCTGAGGACGCCCTTTACTTTGACTCC	ATLGPDKDTAEDALYFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	234	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4243   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.1% (234/246)  IGHV3-23*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  G  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4243   91   AGTGGGTCTCAGCTATCAGTGGTAGTGGTGGTAACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.1% (234/246)  IGHV3-23*01  137  ................T................G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  N  T  L  F  L  Q  I  H  G  L  R  A  D  D  T  A  V  Y  L  C  A  T  L  G  P  D  K  D  T  
                    Query_4243   181  GGAACACGCTGTTTCTGCAGATACACGGCCTGAGAGCCGACGACACGGCCGTATATTTATGTGCGACCCTAGGACCGGATAAAGACACAG  270
V  95.1% (234/246)  IGHV3-23*01  227  A...........A......A..GA..A.............G................AC.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD2-2*01   19   ---------------------------------------------------------------------------------------...  21

                                      IMGT--------------------->                                  
                                      A  E  D  A  L  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4243   271  CTGAGGACGCCCTTTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (6/6)     IGHD2-2*01   22   ...---------------------------------------------------------  24
J  97.8% (45/46)    IGHJ4*02     3    --------------..........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_5182

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           297     7e-83
IGHD2-8*02                                                                                            16.1    2.3  
IGHJ5*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATTGTCGGTGTTGGC	TATTGCACTGG	CAGCAGTTGTTCCCCTCCGTCT	GACGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGTCGGTGTTGGCTATTGCACTGGCAGCAGTTGTTCCCCTCCGTCTGACGCC	ARIVGVGYCTGSSCSPPSDA	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	216	26	0	89.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  G  S  F  S  Y  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E  
                    Query_4244   4    CCCTGAGACTCTCCTGTTCTGTCTCTGGTGGGTCCTTCAGTTATTACTACTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTGGAGT  93
V  89.3% (216/242)  IGHV4-34*01  50   .....TCC...A....CG......A................GG............C...A.............A................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  D  I  N  Q  S  G  S  T  N  Y  S  P  S  L  E  S  R  V  T  I  S  I  D  T  S  K  N  
                    Query_4244   94   GGATTGGTGACATCAATCAAAGTGGAAGCACCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCATATCAATAGACACGTCGAAGAACC  183
V  89.3% (216/242)  IGHV4-34*01  140  .......G..A........T...................A..........A....................G..........C.......  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      H  F  S  L  K  L  K  S  L  A  A  A  D  T  A  V  Y  F  C  A  R  I  V  G  V  G  Y  C  T  G  
                    Query_4244   184  ATTTCTCCCTGAAGCTGAAGTCTTTGGCCGCCGCGGACACGGCTGTCTATTTCTGTGCGAGAATTGTCGGTGTTGGCTATTGCACTGGCA  273
V  89.3% (216/242)  IGHV4-34*01  230  .G................GC...G..A...................G....A..........----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  90.9% (10/11)    IGHD2-8*02   5    -----------------------------------------------------------------------------.....T.....--  15

                                      T------------------------>                                
                                      S  S  C  S  P  P  S  D  A  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4244   274  GCAGTTGTTCCCCTCCGTCTGACGCCTGGGGCCAGGGAACTCTGGTCACCGTCTCCTC  331
J  94.7% (36/38)    IGHJ5*02     12   --------------------...C................C.................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_79903

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           389     2e-110
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGAGCG	GCACTGGCTGGTA	TTTGGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGAGCGGCACTGGCTGGTATTTGGCCTAC	ARGSGTGWYLAY	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	70	5	0	93.3
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	296	7	6	1	0	85.7
Total	N/A	N/A	295	272	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  H  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  M  F  T 
                    Query_4245   2    CAGGTCCATCTTGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCCAGGCTTCTGGTTACATGTTTACC  91
V  92.2% (272/295)  IGHV1-18*04  1    .....T..G..G.............C........................................A...............CC......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  G  Y  N  G  N  T  K  Y 
                    Query_4245   92   ACTTACGGCATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGCTGGGATGGATCAGCGGCTACAATGGTAACACAAAGTAT  181
V  92.2% (272/295)  IGHV1-18*04  91   .GC.....T..........................................A...............CT.................C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  L  Q  D  R  V  T  L  T  I  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_4245   182  GCACAGAACCTCCAGGACAGAGTCACCCTGACCATAGACACATCTACGAGCACTGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGAC  271
V  92.2% (272/295)  IGHV1-18*04  181  ........G.......G..........A......C.........C........A.....C..............................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  V  Y  Y  C  A  R  G  S  G  T  G  W  Y  L  A  Y  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_4245   272  ACGGCCGTCTATTACTGTGCGCGAGGGAGCGGCACTGGCTGGTATTTGGCCTACTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  359
V  92.2% (272/295)  IGHV1-18*04  271  ........G............A...---------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                 
D  92.3% (12/13)    IGHD6-19*01  8    -------------------------------...G.........--------------------------------------------  20
J  97.4% (37/38)    IGHJ4*02     11   --------------------------------------------------......................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_79902

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           297     7e-83
IGHD3-10*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTTTCAGG	TACTATGGTTCGG	CGGATTCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTTCAGGTACTATGGTTCGGCGGATTCT	ARAFRYYGSADS	235	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	120	21	17	1	3	81
FR3-IMGT	121	234	114	102	12	0	89.5
CDR3-IMGT (germline)	235	241	7	7	0	0	100
Total	N/A	N/A	244	219	22	3	89.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  D  S  Y  F  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4246   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCAGTGATTCGTACTTCAGCTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  89.8% (219/244)  IGHV4-59*01  49   ...................C...........G..........AG..AC....GG.......................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y     S  G  S  S  S  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  I  S  K  N 
                    Query_4246   91   TGGATTGGGTATATCTAT---AGTGGGAGCTCCAGCTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCTGACATATCCAAGAAC  177
V  89.8% (219/244)  IGHV4-59*01  139  ..................TAC.........A...A......................................TA....CG.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  T  Y  Y  C  A  R  A  F  R  Y  Y  G  S  A  D 
                    Query_4246   178  CACTTCTCCCTGAGGTTGACCTCTGTGACCGCTGCGGACACGGCCACATATTACTGTGCGAGAGCTTTCAGGTACTATGGTTCGGCGGAT  267
V  89.8% (219/244)  IGHV4-59*01  229  ..G..........A.C...G.........................GTG................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD3-10*01  5    ------------------------------------------------------------------------.............-----  17

                                      -->                                  
                                       S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_4246   268  TCTTGGGGCCAGGGAGCCCTCGTCACCGTCTCCTCAG  304
J  94.1% (32/34)    IGHJ4*02     15   ---............A....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_79900

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  V  R  Q  S  P  G  K  G  L  E 
                    Query_4247   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGGTCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.0% (223/245)  IGHV4-59*01  49   ...............................G........G.AG..A.............A........C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  V  S  V  D  T  S  K  S 
                    Query_4247   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCGTTTCAGTAGACACGTCCAAGAGC  180
V  91.0% (223/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T....A.A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  I  S  L  S  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_4247   181  CAGATCTCCCTGAGCCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  91.0% (223/245)  IGHV4-59*01  229  ...T.........AG........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_4247   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_79907

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           343     2e-96
IGHD3-16*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	N/A	CGTTGGGGGG	GCTGTCTTTGGACT	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCGTTGGGGGGGCTGTCTTTGGACTGTATGGACGTC	AKALGGLSLDCMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  E  F  T  F  R  N  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4248   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGAATTCACCTTTCGCAACTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-23*01  47   ..............................G..........A...G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  F  S  G  P  L  T  S  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4248   91   AGTGGGTCTCAGGATTTAGTGGTCCTCTTACTAGCACATACTTCGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (234/249)  IGHV3-23*01  137  ............CTA........AG.GG.GG...........A...............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  L  G  G  L  S  L  
                    Query_4248   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTATTGTGCGAAAGCGTTGGGGGGGCTGTCTTTGG  270
V  94.0% (234/249)  IGHV3-23*01  227  ..........................................................C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (9/10)     IGHD3-16*01  13   ---------------------------------------------------------------------....T.....-----------  22

                                      ------------->                                 
                                      D  C  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4248   271  ACTGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  100.0% (44/44)   IGHJ6*02     19   ---............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_301008

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           322     2e-90
IGHD4-17*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	TTTCCA	GACTACGGTGAC	AACTTTTTACGAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTTTCCAGACTACGGTGACAACTTTTTACGAT	TFQTTVTTFYD	245	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	10	1	0	90.9
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	130	30	28	2	0	93.3
FR3-IMGT	131	244	114	107	7	0	93.9
CDR3-IMGT (germline)	245	246	2	2	0	0	100
Total	N/A	N/A	232	219	13	0	94.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  I  F  S  N  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  
                    Query_4249   15   GTACAGCCTCTGGATTCATTTTCAGTAATGCCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTA  104
V  94.4% (219/232)  IGHV3-15*01  65   ..G...............C.........C..........G..................................................  154
                                         A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  

                                      -------CDR2-IMGT---------><----------------------------------------------------FR3-IMGT---
                                      K  S  K  N  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  K  T  V  
                    Query_4249   105  AAAGCAAAAATGATGGTGGAACAACAGACTACGCTGCACCCGTGAAAGGCAGATTTACCATCTCAAGAGATGATTCAAAGAAGACGGTGT  194
V  94.4% (219/232)  IGHV3-15*01  155  .........C.........G...................................C.......................A..C...C...  244
                                      K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  

                                      -------------------------------------------------><-----------CDR3-IMGT----------->       
                                      Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  F  Q  T  T  V  T  T  F  Y  D  W  G  
                    Query_4249   195  ATCTGCAAATGAATAGCCTGAAAACCGAGGACACAGCCGTGTACTATTGTACTTTCCAGACTACGGTGACAACTTTTTACGATTGGGGCC  284
V  94.4% (219/232)  IGHV3-15*01  245  .............C.............................T..C.....--------------------------------------  296
                                      Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                                      
D  100.0% (12/12)   IGHD4-17*01  2    ----------------------------------------------------------............--------------------  13
J  100.0% (34/34)   IGHJ4*02     15   -----------------------------------------------------------------------------------.......  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_4249   285  AGGGAACCCTGGTCACCGTCTCCTCAG  311
J  100.0% (34/34)   IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_79905

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           294     6e-82
IGHD6-25*01                                                                                           18.0    0.58 
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-25*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	CAGCGGCTA	AAACTACTCGATACAGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGATCAGCGGCTAAAACTACTCGATACAGTTGGTTCGACCCA	SRSAAKTTRYSWFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  G  S  G  F  S  F  I  S  Y  S  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4250   1    GGTCCCTGAGACTCTCCTGTTCAGGCTCTGGATTCTCTTTTATTTCGTATAGCATCAACTGGGTCCGCCAGGCTCCCGGGAAGGGGCTGG  90
V  87.9% (218/248)  IGHV3-21*01  47   ....................G...C..........A.C..C.G.AGC........G....................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  A  S  G  D  Y  I  Y  Y  I  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_4250   91   AGTGGGTCTCATCTGTCAGTGCTAGCGGTGACTACATATACTACATAGACTCAGTGAGGGGCCGATTCACCATCTCTAGAGACAACGCCA  180
V  87.9% (218/248)  IGHV3-21*01  137  .............CA.T...AG...TA..AGT............GC...........A..................C.............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  K  S  V  Y  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  S  R  S  A  A  K  T  T  R  
                    Query_4250   181  AGAAGTCAGTGTATCTGCAGATGAACGGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTTCGAGATCAGCGGCTAAAACTACTCGAT  270
V  87.9% (218/248)  IGHV3-21*01  227  ....C...C..........A......A...................................G.....----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-25*01  9    ---------------------------------------------------------------------.........------------  17

                                      ---------------->                                  
                                      Y  S  W  F  D  P  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_4250   271  ACAGTTGGTTCGACCCATGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  321
J  95.7% (44/46)    IGHJ5*02     6    -----...........C.....................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_301005

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         388     4e-110
IGHJ3*02                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ATGGGCGCAGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGCGCAGATGATGCTTTTGATATC	ARMGADDAFDI	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	248	0	0	100


Alignments

                                         <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                            S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                     Query_4251     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  100.0% (248/248)  IGHV3-30-3*01  47   ..........................................................................................  136
                                            S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                         -------------><-------CDR2-IMGT------><---------------------------------------------------
                                         E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                     Query_4251     91   AGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  100.0% (248/248)  IGHV3-30-3*01  137  ..........................................................................................  226
                                         E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                         -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                         K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  M  G  A  D  D  A  F  
                     Query_4251     181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAATGGGCGCAGATGATGCTTTTG  270
V  100.0% (248/248)  IGHV3-30-3*01  227  ....................................................................----------------------  294
                                         K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (50/50)    IGHJ3*02       1    -------------------------------------------------------------------------------...........  11

                                         ---->                                  
                                         D  I  W  G  Q  G  T  M  V  T  V  S  S  
                     Query_4251     271  ATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  309
J  100.0% (50/50)    IGHJ3*02       12   .......................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_301004

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           377     9e-107
IGHD3-3*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTAAA	ACGATTTTTGGAGTGGTTAT	CCATTTGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTAAAACGATTTTTGGAGTGGTTATCCATTTGGGCTACTTTGACTAC	AKVKTIFGVVIHLGYFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	245	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4252   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (245/249)  IGHV3-23*01  47   .....................C....................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  D  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4252   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGATAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  98.4% (245/249)  IGHV3-23*01  137  ..............................G...........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  V  K  T  I  F  G  V  
                    Query_4252   181  AGAACACCCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTTAAAACGATTTTTGGAGTGG  270
V  98.4% (245/249)  IGHV3-23*01  227  .......G....A........................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (20/20)   IGHD3-3*01   6    --------------------------------------------------------------------------................  21

                                      IMGT--------------------->                                  
                                      V  I  H  L  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4252   271  TTATCCATTTGGGCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (20/20)   IGHD3-3*01   22   ....--------------------------------------------------------  25
J  100.0% (47/47)   IGHJ4*02     2    -------------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_79909

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           311     4e-87
IGHD3-3*02                                                                                            10.3    119  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGAA	GTGGCGGGCGGACGAAGGGTC	CATTT	A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAAGTGGCGGGCGGACGAAGGGTCCATTTATGACTCC	TKWRADEGSIYDS	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	223	24	0	90.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  V  M  S  W  V  R  Q  A  P  G  K  G  P  
                    Query_4253   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACCTTTAGCAACTATGTCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  90.3% (223/247)  IGHV3-23*01  47   ............................T................G.....C...................................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  Y  Y  R  G  E  T  T  T  Y  A  N  S  V  E  G  R  F  T  I  S  R  D  N  S  
                    Query_4253   91   AGTGGGTCTCAACTATTTATTATCGTGGTGAGACTACAACCTACGCAAACTCCGTGGAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  90.3% (223/247)  IGHV3-23*01  137  ...........G.....AG.GG.A......GT.GC...TA.......G........A.................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  M  Y  Y  C  T  K  W  R  A  D  E  G  S  
                    Query_4253   181  AGAACACTCTGTACTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATGTATTACTGTACGAAGTGGCGGGCGGACGAAGGGTCCA  270
V  90.3% (223/247)  IGHV3-23*01  227  .......G.....TC...................................G.A.........G....-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD3-3*02   8    ----------------------------------------------------------------------------------------..  9

                                      ---------->                                  
                                      I  Y  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4253   271  TTTATGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
D  100.0% (5/5)     IGHD3-3*02   10   ...------------------------------------------  12
J  97.6% (40/41)    IGHJ4*02     8    ----.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_301006

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           339     2e-95
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCTCGTTTATG	ATGGTTCGGGGAGT	CCTCCCGAAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTCGTTTATGATGGTTCGGGGAGTCCTCCCGAAGGACTAC	ARLSFMMVRGVLPKDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  V  N  S  G  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4254   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCGTCAACAGTGGTGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  93.6% (233/249)  IGHV4-61*08  49   ..................A.....................G...........A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  T  G  G  A  N  Y  N  P  S  L  K  S  R  V  S  I  S  I  D  T  S 
                    Query_4254   91   CTCGAGTGGATTGGATATATCTATTACACTGGGGGCGCCAACTACAATCCCTCCCTCAAGAGTCGAGTCAGCATATCAATAGACACGTCC  180
V  93.6% (233/249)  IGHV4-61*08  139  ..G...........G.............G....A..A..........C......................C.......G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       E  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  S  F  M  M  V  R 
                    Query_4254   181  GAGAATCAGTTCTCCCTGAAGCTGAGTTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGCGAGACTCTCGTTTATGATGGTTCGG  270
V  93.6% (233/249)  IGHV4-61*08  229  A....C....................C..........................G..T............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (14/14)   IGHD3-10*01  9    ---------------------------------------------------------------------------------.........  17

                                      GT------------------>                                  
                                       G  V  L  P  K  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4254   271  GGAGTCCTCCCGAAGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  100.0% (14/14)   IGHD3-10*01  18   .....--------------------------------------------------  22
J  100.0% (40/40)   IGHJ4*02     9    ---------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_301001

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           353     9e-100
IGHD5-18*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATAGTC	ATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATAGTCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	114	0	0	100
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	234	8	0	96.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  V  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_4255   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGTCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  96.7% (234/242)  IGHV4-59*01  50   .....TCC...A....C.............G...........................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  N  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_4255   94   GGATTGGGTATATCTACAACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  96.7% (234/242)  IGHV4-59*01  140  ................TT........................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D  
                    Query_4255   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATATAGTCATGGTTACGGAGGAGTTGACT  273
V  96.7% (234/242)  IGHV4-59*01  230  ..............................................................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD5-18*01  13   ---------------------------------------------------------------------........-------------  20
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------------------------------------------......  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4255   274  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (42/42)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_301003

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD3-16*01                                                                                           16.1    2.4  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACAGTAGCGGCTGGTA	TTGGGGGGGTT	CG	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGTAGCGGCTGGTATTGGGGGGGTTCGGGTATGGACGTC	ARYSSGWYWGGSGMDV	263	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	39	6	0	86.7
CDR1-IMGT	47	76	30	25	5	0	83.3
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	107	7	0	93.9
CDR3-IMGT (germline)	263	268	6	6	0	0	100
Total	N/A	N/A	267	246	21	0	92.1


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  E  T  L  S  L  I  C  S  V  S  G  D  S  I  S  T  S  G  H  Y  W  G  W  I  R 
                    Query_4256   2    CTGGTGAAACCCACGGAGACCCTGTCCCTCATTTGCAGTGTCTCTGGTGATTCCATCAGCACTAGTGGTCACTACTGGGGCTGGATCCGC  91
V  92.1% (246/267)  IGHV4-39*01  31   ........G..TT..................CC....C...........GC..........G....A..T....................  120
                                       L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R 

                                      ------FR2-IMGT---------------------><-----CDR2-IMGT-----><--------------------------------
                                       Q  P  P  G  K  G  L  E  W  I  G  S  I  N  Y  S  G  T  T  H  D  N  P  S  L  K  S  R  L  T 
                    Query_4256   92   CAGCCCCCAGGGAAGGGGTTGGAGTGGATTGGGAGTATCAATTATAGTGGGACCACCCACGACAACCCGTCCCTCAAGAGTCGACTCACC  181
V  92.1% (246/267)  IGHV4-39*01  121  ..................C....................T............G....T..T.......................G.....  210
                                       Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T 

                                      --------------------FR3-IMGT----------------------------------------------------><--------
                                       I  S  V  D  T  S  K  N  Q  L  S  L  K  L  N  S  V  T  T  A  D  T  A  V  Y  Y  C  A  R  Y 
                    Query_4256   182  ATATCCGTAGACACGTCCAAGAACCAGTTGTCCCTGAAGCTGAACTCTGTGACCACCGCAGACACGGCTGTGTATTATTGTGCGAGATAC  271
V  92.1% (246/267)  IGHV4-39*01  211  .............................C.............G..........G......................C.........---  297
                                       I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R    

                                      -----------CDR3-IMGT------------------>                                 
                                       S  S  G  W  Y  W  G  G  S  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_4256   272  AGTAGCGGCTGGTATTGGGGGGGTTCGGGTATGGACGTCTGGGGCCAAGGGACTACGGTCATCGTCTCCTCA  343
D  90.9% (10/11)    IGHD3-16*01  16   --------------.......A...-----------------------------------------------  26
J  95.6% (43/45)    IGHJ6*02     18   ---------------------------..........................C.......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_301002

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD3-22*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGAAA	TATGACTATGAT	CTTGGAGACGTGGGTCTCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGAAATATGACTATGATCTTGGAGACGTGGGTCTCCACAACTTTGACTCC	ARAPKYDYDLGDVGLHNFDS	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  A  C  T  V  S  G  G  S  M  S  N  Y  F  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_4257   1    ACCCTGTCCCTCGCCTGCACTGTCTCTGGTGGCTCCATGAGTAATTACTTCTGGAGCTGGATTCGGCAGCCCCCGGGGAAGAGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   ............A.........................C....G.....A............C...........A......G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  L  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  I  D  T  P  K  N 
                    Query_4257   91   TGGATTGGGTATATCTATTATAGTGGACTCACCAAGTACAACCCGTCCCTCAAGAGTCGAGTCAGCATATCAATTGACACGCCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ....................C.....GAG......C........C...................C.......G.A......T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       H  F  S  L  K  V  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  A  P  K  Y  D  Y  D  L  G 
                    Query_4257   181  CACTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCATTTATTACTGTGCGAGAGCCCCGAAATATGACTATGATCTTGGA  270
V  91.4% (223/244)  IGHV4-59*01  229  ..G............C.............................G.G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-22*01  2    ------------------------------------------------------------------------...T........------  13

                                      GT------------------------>                                  
                                       D  V  G  L  H  N  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4257   271  GACGTGGGTCTCCACAACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  97.8% (44/45)    IGHJ4*02     4    ----------------.........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_13334

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           288     4e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCATC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATCCTACTTTGCCTTC	ARVSTSASYFAF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	214	30	0	87.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_4258   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGACAACCCCCAGGAAAGGGACTGGAG  90
V  87.7% (214/244)  IGHV4-59*01  49   .................................T........A.....T.C.........A....G..G........G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  S  F  D  T  S  K  R 
                    Query_4258   91   TGGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGTCCTTTGACACGTCCAAGAGG  180
V  87.7% (214/244)  IGHV4-59*01  139  .......GGT....C...........G.G..C...C................A..G............A..AG.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  S  Y  F  A 
                    Query_4258   181  CAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATCCTACTTTGCC  270
V  87.7% (214/244)  IGHV4-59*01  229  .............A....AGC..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-2*01   17   ---------------------------------------------------------------------......---------------  22
J  88.9% (40/45)    IGHJ4*02     2    --------------------------------------------------------------------------------........A.  11

                                      -->                                
                                       F  W  G  R  G  T  L  V  V  V  S  S
                    Query_4258   271  TTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  305
J  88.9% (40/45)    IGHJ4*02     12   .A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_40918

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            285     4e-79
IGHD2-8*01                                                                                            14.1    8.7  
IGHJ4*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-8*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGAG	ATGCTAT	CACAACGGCTGCTGTGGGGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACCGAGATGCTATCACAACGGCTGCTGTGGGGGGCTACTTTGATTAC	AKDRDAITTAAVGGYFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	216	34	0	86.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  R  T  S  G  F  I  F  G  H  Y  V  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_4259  1    GGTCCCTGAGACTCTCCTGTAGAACCTCTGGATTCATTTTTGGTCATTATGTCATGCACTGGGTCCGACAACCTCCGGGAAAGGGCCTGG  90
V  86.4% (216/250)  IGHV3-9*01  47   ....................GC.G............CC....A.G......C...............G...G....A..G..........  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  G  L  G  Y  D  N  V  P  V  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_4259  91   AGTGGGTCGCAGGTCTTGGTTACGATAATGTTCCCGTCGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACGACGCCG  180
V  86.4% (216/250)  IGHV3-9*01  137  ........T.....A..A...GGA...G..G.AG.A.A.............................................A.....A  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                     G  N  T  L  Y  L  Q  M  D  S  L  R  D  E  D  T  A  F  Y  Y  C  A  K  D  R  D  A  I  T  T  
                    Query_4259  181  GGAACACCCTCTATCTGCAGATGGACAGTCTGAGAGATGAGGACACAGCCTTCTATTACTGTGCAAAAGACCGAGATGCTATCACAACGG  270
V  86.4% (216/250)  IGHV3-9*01  227  A....T....G........A...A............C.........G.....G.................--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD2-8*01  22   ---------------------------------------------------------------------------.......--------  28

                                     IMGT--------------------->                                  
                                     A  A  V  G  G  Y  F  D  Y  W  G  H  G  V  L  V  T  V  S  S  
                    Query_4259  271  CTGCTGTGGGGGGCTACTTTGATTACTGGGGCCACGGAGTTCTGGTCACCGTCTCCTCAG  330
J  89.4% (42/47)    IGHJ4*01    2    -------------.........C...........A...ACC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_310855

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            414     5e-118
IGHD6-19*01                                                                                           27.6    8e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GAAGAG	ATAGCAGTGGCTGG	CTCGTCA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGAAGAGATAGCAGTGGCTGGCTCGTCAACTTTGACTAC	ARGRDSSGWLVNFDY	273	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	29	1	0	96.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	26	1	0	96.3
FR3-IMGT	159	272	114	109	5	0	95.6
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	272	7	0	97.5


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  T  S  A  A  W  N  W  
                    Query_4260   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCACCAGTGCTGCTTGGAACTGGA  90
V  97.5% (272/279)  IGHV6-1*01   26   .....................................................................A....................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  H  N  D  Y  A  I  S  V  K  
                    Query_4260   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGCATAATGATTATGCAATATCTGTCAAAA  180
V  97.5% (272/279)  IGHV6-1*01   116  ..............................................................T..............G.......G....  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  N  I  N  P  D  T  P  K  N  Q  F  S  L  H  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_4260   181  GTCGAATAAACATCAACCCAGACACACCCAAGAACCAGTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  97.5% (272/279)  IGHV6-1*01   206  .........C................T......................G........................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-----------------CDR3-IMGT----------------->                                
                                      C  A  R  G  R  D  S  S  G  W  L  V  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4260   271  GTGCAAGAGGAAGAGATAGCAGTGGCTGGCTCGTCAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  349
V  97.5% (272/279)  IGHV6-1*01   296  .........----------------------------------------------------------------------  304
                                      C  A  R                                                                        
D  100.0% (14/14)   IGHD6-19*01  5    ---------------..............--------------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     4    ------------------------------------...........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_40914

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           262     4e-72
IGHD2-15*01                                                                                           10.3    119  
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	ACATAATCCT	GCTGC	CAGAGGGGC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGACATAATCCTGCTGCCAGAGGGGCCAACTGGTTCGACCTC	ARGHNPAARGANWFDL	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	48	24	19	2	3	79.2
FR2-IMGT	49	99	51	45	6	0	88.2
CDR2-IMGT	100	120	21	18	3	0	85.7
FR3-IMGT	121	234	114	95	19	0	83.3
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	245	208	34	3	84.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  D  F  Y  G  G  S  F     D  S  Y  W  N  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_4261   1    ACCCTGTCCCTCACCTGCGATTTTTATGGTGGGTCCTT---TGATTCCTACTGGAATTGGATCCGCCAGACTCCAGGGAAGGGGCTGGAG  87
V  84.9% (208/245)  IGHV4-34*01  49   ...................C.G.C..............CAG..G..A........GC............C.C..................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  N  R  A  G  S  T  N  F  N  P  S  L  E  S  R  L  T  I  S  V  D  T  S  T  K 
                    Query_4261   88   TGGATTGCAGAAATCAATCGTGCTGGAAGCACCAACTTCAATCCGTCCCTCGAGAGTCGACTCACCATTTCAGTGGACACGTCCACGAAG  177
V  84.9% (208/245)  IGHV4-34*01  139  .......GG..........A.AG..............A...C.........A........G.......A.....A..........A...C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       R  F  S  L  R  L  N  S  L  N  A  A  D  T  G  V  Y  Y  C  A  R  G  H  N  P  A  A  R  G  A 
                    Query_4261   178  CGATTCTCCCTGAGGCTAAATTCTCTTAACGCCGCAGACACGGGTGTGTATTACTGTGCGCGAGGACATAATCCTGCTGCCAGAGGGGCC  267
V  84.9% (208/245)  IGHV4-34*01  229  .AG..........A...G.GC...G.G.C......G.......C................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (5/5)     IGHD2-15*01  21   ---------------------------------------------------------------------------.....----------  25
J  96.0% (48/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  D  L  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_4261   268  AACTGGTTCGACCTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  316
J  96.0% (48/50)    IGHJ5*02     3    .............C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_40915

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD3-22*01                                                                                           16.1    2.3   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCAC	ARAPPFDYDLDVRGIHNFDH	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	236	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4262   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (236/244)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_4262   91   TGGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAGC  180
V  96.7% (236/244)  IGHV4-59*01  139  ..........A.................G.............................................A.............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D 
                    Query_4262   181  CAGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGAC  270
V  96.7% (236/244)  IGHV4-59*01  229  ..................AG...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-22*01  6    ----------------------------------------------------------------------------........------  13

                                      GT------------------------>                                  
                                       V  R  G  I  H  N  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4262   271  GTAAGGGGAATCCACAACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  97.8% (44/45)    IGHJ4*02     4    ----------------........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_40916

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_4263   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.5% (278/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_4263   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  P  A
                    Query_4263   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACCCCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  .......C.....................................C...........G......A....................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_4263   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_4263   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_40917

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           343     2e-96
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTCTGTG	AGCAGTGCCTGGT	CGTTTGGTCCCCCCCCACGCCTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCTGTGAGCAGTGCCTGGTCGTTTGGTCCCCCCCCACGCCTCTACTACCTCGACTGC	ARHSVSSAWSFGPPPRLYYLDC	250	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	135	27	19	2	6	70.4
FR3-IMGT	136	249	114	107	7	0	93.9
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	240	11	6	93.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  H  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_4264   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGCAGTTACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.4% (240/257)  IGHV4-39*01  49   ...............................................T......T...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  T  T  N  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D 
                    Query_4264   91   CTGGAGTGGATTGGGAGTATCTATTATAGCGGGACCACCAACACCAACTACAACCCGTCCCTCAAGAGTCGAGTAACCATGTCCGTAGAC  180
V  93.4% (240/257)  IGHV4-39*01  139  .............................T...------.G....T............................C.....A.........  222
                                       L  E  W  I  G  S  I  Y  Y  S  G        S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------------
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  T  Y  Y  C  A  R  H  S  V  S  S 
                    Query_4264   181  ACCTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGAGCGCCGCAGACACGGCTACGTATTACTGTGCGAGACATTCTGTGAGCAGT  270
V  93.4% (240/257)  IGHV4-39*01  223  ..G.....................................C................GT..................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  92.3% (12/13)    IGHD6-19*01  7    ------------------------------------------------------------------------------------......  12

                                      --------CDR3-IMGT--------------------------->                                  
                                       A  W  S  F  G  P  P  P  R  L  Y  Y  L  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4264   271  GCCTGGTCGTTTGGTCCCCCCCCACGCCTCTACTACCTCGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  349
D  92.3% (12/13)    IGHD6-19*01  13   .G.....------------------------------------------------------------------------  19
J  93.8% (45/48)    IGHJ4*02     1    -------------------------------.....T.T....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_40911

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           305     3e-85
IGHD3-16*01                                                                                           12.2    31   
IGHJ1*01                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-16*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GTC	ATTATG	GAGCCTCA	CAGCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGGTCATTATGGAGCCTCACAGCAC	TRGHYGASQH	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	41	10	0	80.4
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	222	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  G  F  H  W  V  R  Q  A  P  G  G  G  L  
                    Query_4265   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACTACCTACGGGTTCCACTGGGTCCGCCAAGCTCCAGGGGGAGGACTAA  90
V  89.2% (222/249)  IGHV3-74*01  47   ..........................................G..G....T..A.G........................AAG..G..GG  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      M  R  V  S  L  I  D  E  D  G  S  G  A  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_4265   91   TGCGGGTCTCACTTATTGATGAAGATGGCAGCGGCGCAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACGCCA  180
V  89.2% (222/249)  IGHV3-74*01  137  ..T.........G....A..AGT.....G..TA..A...G...........................................A......  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  G  H  Y  G  A  S  Q  
                    Query_4265   181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTATTGTACAAGAGGTCATTATGGAGCCTCACAGC  270
V  89.2% (222/249)  IGHV3-74*01  227  .......G............................................G.....C...G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  3    ------------------------------------------------------------------------......------------  8
J  92.5% (37/40)    IGHJ1*01     13   --------------------------------------------------------------------------------------....  16

                                      ->                                  
                                      H  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4265   271  ACTGGGGCCAGGGCACTATGGTCACCGTCTCGTCAG  306
J  92.5% (37/40)    IGHJ1*01     17   ................CC.............C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_40912

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           361     4e-102
IGHD5-18*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGCCATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGCCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	237	6	0	97.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_4266   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAAAGACTGGAG  90
V  97.5% (237/243)  IGHV4-59*01  49   .......................................A...G...........G........................GG........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  P  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_4266   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCCCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.5% (237/243)  IGHV4-59*01  139  .................................................T........................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D 
                    Query_4266   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGCCATGGTTACGGAGGAGTTGAC  270
V  97.5% (237/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD5-18*01  6    ---------------------------------------------------------------......T........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4266   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_40913

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            350     8e-99
IGHD2-8*02                                                                                            19.9    0.15 
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AAAGCGGGCTC	TACTGGTGGT	A	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAAAGCGGGCTCTACTGGTGGTAACTTTGACTAC	ARKAGSTGGNFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  I  F  T  H  Y  W  M  S  W  V  R  Q  A  P  G  K  W  L  
                    Query_4267  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTTACTCACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGTGGCTGG  90
V  95.2% (236/248)  IGHV3-7*03  47   ....................................CC....G.AG.....................................G......  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  D  I  K  Q  D  G  S  E  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4267  91   AGTGGGTTGCCGACATAAAGCAGGATGGAAGTGAGAAATACTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (236/248)  IGHV3-7*03  137  .......G...A..........A......................T............................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                     K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  K  A  G  S  T  G  G  
                    Query_4267  181  AGAACTCAGTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAAAAGCGGGCTCTACTGGTGGTA  270
V  95.2% (236/248)  IGHV3-7*03  227  ........C.G.........................................................----------------------  294
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD2-8*02  10   -------------------------------------------------------------------------------..........-  19

                                     ---------->                                  
                                     N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4267  271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (45/45)   IGHJ4*02    4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_75590

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           265     5e-73
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTCGCCAA	ATTACGATTTCTGGAATGGTTTTTA	CATTACCAAAAAAGGA	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCGCCAAATTACGATTTCTGGAATGGTTTTTACATTACCAAAAAAGGAGCTTTTGATATC	ARESPNYDFWNGFYITKKGAFDI	225	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	98	51	43	2	6	84.3
CDR2-IMGT	99	110	21	10	2	9	47.6
FR3-IMGT	111	224	114	101	13	0	88.6
CDR3-IMGT (germline)	225	232	8	8	0	0	100
Total	N/A	N/A	247	210	22	15	85


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  N  F  N  H  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4268   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAATTTTAACCACATTAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  85.0% (210/247)  IGHV3-53*01  47   ..........................................G.AGC...T....G.G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V                 G  D  N  T  A  Y  A  E  S  V  R  G  R  F  T  I  S  R  D  N  S  M  
                    Query_4268   91   AGTGGGTC---------------GGTGATAACACAGCCTATGCAGAGTCCGTGAGGGGCCGATTCACTATCTCCAGAGACAATTCCATGA  165
V  85.0% (210/247)  IGHV3-53*01  137  ........TCAGTTATTTATAGC....G..G....TA...C.....C.......A............C...................A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------------C
                                      N  T  V  F  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R  E  S  P  N  Y  D  F  W  
                    Query_4268   166  ACACGGTGTTTCTTCAAATGAACAGCCTGAGAGCCGGGGACACGGCCGTTTACTATTGTGCGAGAGAGTCGCCAAATTACGATTTCTGGA  255
V  85.0% (210/247)  IGHV3-53*01  227  .....C...A..........................A............G..T..C...........-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  88.0% (22/25)    IGHD3-3*01   3    ---------------------------------------------------------------------------..........T....  17

                                      DR3-IMGT----------------------------->                                  
                                      N  G  F  Y  I  T  K  K  G  A  F  D  I  W  G  Q  G  T  V  V  I  V  S  S  
                    Query_4268   256  ATGGTTTTTACATTACCAAAAAAGGAGCTTTTGATATCTGGGGCCAGGGGACAGTGGTCATCGTCTCTTCAG  327
D  88.0% (22/25)    IGHD3-3*01   18   G.....A...--------------------------------------------------------------  27
J  93.5% (43/46)    IGHJ3*02     5    --------------------------....................A......A......C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_75591

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           332     3e-93
IGHD2-21*02                                                                                           12.2    31   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTTCA	GGTGAC	ACTG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTTCAGGTGACACTGGACTAC	AKDLQVTLDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4269   1    GGTCCCTGAGACTCTCCTGTGCAGCATCTGGATTCACCTTCAGTAGTTATGCCATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-30*04  47   .........................C....................C.....T..........................C..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  E  K  Y  H  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_4269   91   AATGGGTGGCAGTTATATCATATGATGGAAGTGAGAAATATCACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  92.4% (231/250)  IGHV3-30*04  137  .G..............................A.T.....CT...............A...........................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  G  G  D  T  A  I  Y  Y  C  A  K  D  L  Q  V  T  L  D  
                    Query_4269   181  AGAACACGCTGTACTTGCAAATGAACAGCCTTAGAGGTGGGGACACGGCTATATATTACTGTGCGAAAGATCTTCAGGTGACACTGGACT  270
V  92.4% (231/250)  IGHV3-30*04  227  .............TC................G....C..A..........G.G.............G...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*02  14   ----------------------------------------------------------------------------......--------  19
J  97.5% (39/40)    IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                  
                                      Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_4269   271  ACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  306
J  97.5% (39/40)    IGHJ4*02     13   ..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_75592

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         315     5e-88
IGHD4-17*01                                                                                           21.8    0.042
IGHJ3*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGGGGA	ACTTCGGTGACTAC	GGGAGG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATTTGGGGAACTTCGGTGACTACGGGAGGGATGCTTTTGATATA	ARDLGNFGDYGRDAFDI	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	226	25	0	90


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  V  T  S  G  A  Y  C  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4270     1    ACCCTGTCCCTCACCTGCGCCGTCTCTGGTGGCTCCGTCACGAGTGGTGCTTACTGCTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  90.0% (226/251)  IGHV4-30-4*01  49   ..................A.T...............A...GC.......A.....A..................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  C  S  I  G  G  T  Y  Y  N  S  S  L  K  S  R  I  I  I  S  F  D  T  S 
                    Query_4270     91   CTGGAGTGGATTGGGTACATCTGTTCCATTGGGGGCACCTACTACAATTCGTCCCTCAAGAGTCGAATTATCATTTCATTTGACACGTCC  180
V  90.0% (226/251)  IGHV4-30-4*01  139  ......................A..A..G....A.............CC.................G...C...A...G.A.........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  Q  L  S  S  V  T  A  S  D  T  A  V  Y  Y  C  A  R  D  L  G  N  F  G  D 
                    Query_4270     181  AAGAACCAGTTTTCCCTGCAGTTGAGTTCTGTGACGGCCTCAGACACGGCCGTATATTACTGTGCCAGAGATTTGGGGAACTTCGGTGAC  270
V  90.0% (226/251)  IGHV4-30-4*01  229  ...........C......A..C....C........T...G.............G.................-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD4-17*01    3    -------------------------------------------------------------------------------...A.......  13

                                        MGT-------------------->                                  
                                         Y  G  R  D  A  F  D  I  W  G  Q  G  T  R  I  T  V  S  S  
                    Query_4270     271  TACGGGAGGGATGCTTTTGATATATGGGGCCAAGGGACAAGGATCACCGTCTCTTCAG  328
D  92.9% (13/14)    IGHD4-17*01    14   ...-------------------------------------------------------  16
J  93.9% (46/49)    IGHJ3*02       2    ---------..............C................T.G...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_75593

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           352     3e-99
IGHD4-17*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTGGGCCCGCGG	ACGGTAACTAC	CCCGCCGACTGCCTCG	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTGGGCCCGCGGACGGTAACTACCCCGCCGACTGCCTCGACTGCGGGATGGACGCC	ARAGPADGNYPADCLDCGMDA	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  L  S  N  Y  N  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4271   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTGACCCTCAGTAATTATAACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-21*01  47   ..................................C...T......GC....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  S  S  S  S  S  Y  K  Y  Y  A  D  S  V  K  G  R  F  T  I  A  R  D  N  A  
                    Query_4271   91   AGTGGGTCTCATTTATTAGCAGTAGTAGTAGTTACAAATACTATGCAGACTCAGTGAAGGGCCGATTCACCATCGCCAGAGACAACGCCA  180
V  95.2% (237/249)  IGHV3-21*01  137  ............CC.....T................T......C..............................T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  G  P  A  D  G  N  
                    Query_4271   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCGGTGTATTACTGTGCGAGAGCTGGGCCCGCGGACGGTAACT  270
V  95.2% (237/249)  IGHV3-21*01  227  .................................................T...................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD4-17*01  6    ---------------------------------------------------------------------------------.....G...  14

                                      DR3-IMGT-------------------------->                                 
                                      Y  P  A  D  C  L  D  C  G  M  D  A  W  G  Q  G  S  T  V  T  V  S  S 
                    Query_4271   271  ACCCCGCCGACTGCCTCGACTGCGGGATGGACGCCTGGGGCCAAGGGTCCACGGTCACCGTCTCCTCA  338
D  90.9% (10/11)    IGHD4-17*01  15   ..------------------------------------------------------------------  16
J  92.0% (46/50)    IGHJ6*02     13   ------------------...A...T.......T.............A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_75594

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           338     5e-95
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	230	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_4272   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.3% (230/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4272   91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCC  180
V  94.3% (230/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C.................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_4272   181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  94.3% (230/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4272   271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_75596

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-9*01                                                                                            12.2    31    
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGGCAAA	ATAGTTTGA	TAGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGGCAAAATAGTTTGATAGGCTTTGACTCT	ARGGQNSLIGFDS	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_4273   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTATTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   .....................................................C.A.....G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S 
                    Query_4273   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTTTCCATATCAATAGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..........................................................A..........A........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  D  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  Q  N  S  L  I 
                    Query_4273   181  AAGAACCAGTTCTCCCTGGACCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTATTGTGCGAGAGGAGGGCAAAATAGTTTGATA  270
V  96.0% (240/250)  IGHV4-31*03  229  ..................A.G......................................C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (8/9)      IGHD3-9*01   9    -------------------------------------------------------------------------------...T.....--  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_4273   271  GGCTTTGACTCTTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  316
J  93.2% (41/44)    IGHJ4*02     5    --........AC............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_75597

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           336     1e-94
IGHD4-17*01                                                                                           21.8    0.043
IGHJ6*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GTTTGGAGGCTCCTTTG	TACGGTGACTA	TGTG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAGGTTTGGAGGCTCCTTTGTACGGTGACTATGTGTACTACTATTACGGTATGGACGTC	AQGLEAPLYGDYVYYYYGMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  G  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  E  G  L  
                    Query_4274   1    GGTCCCTGAGACTCTCCTGTGGAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGGAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-23*01  47   .....................C....................................C.....................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  G  I  S  S  F  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4274   91   AGTGGCTCTCAGGTATTAGTAGTTTCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.2% (232/249)  IGHV3-23*01  137  .....G......C.......G..AGT................................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  M  L  F  L  Q  M  N  S  L  S  A  E  D  T  A  I  Y  Y  C  A  Q  G  L  E  A  P  L  Y  
                    Query_4274   181  AGAATATGCTATTTCTGCAAATGAACAGCCTGAGCGCCGAGGACACGGCCATATATTATTGTGCGCAAGGTTTGGAGGCTCCTTTGTACG  270
V  93.2% (232/249)  IGHV3-23*01  227  ....C.C...G.A.....................A...............G.......C......A...---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD4-17*01  5    --------------------------------------------------------------------------------------....  8

                                      DR3-IMGT-------------------------->                                 
                                      G  D  Y  V  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4274   271  GTGACTATGTGTACTACTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  338
D  100.0% (11/11)   IGHD4-17*01  9    .......-------------------------------------------------------------  15
J  96.5% (55/57)    IGHJ6*02     6    -----------........C............................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_75598

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           452     3e-129
IGHD6-13*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAC	ATAGCAGCAGCTGGT	CGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTAC	ARSHSSSWSGFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	289	0	0	100


Alignments

                                       <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                     Query_4275   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  100.0% (289/289)  IGHV5-51*03  6    ..........................................................................................  95
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                       ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                         W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                     Query_4275   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  100.0% (289/289)  IGHV5-51*03  96   ..........................................................................................  185
                                         W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                       ------------------------------------------FR3-IMGT----------------------------------------
                                         S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                     Query_4275   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  100.0% (289/289)  IGHV5-51*03  186  ..........................................................................................  275
                                         S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                       ------------><--------------CDR3-IMGT-------------->                                  
                                         M  Y  Y  C  A  R  S  H  S  S  S  W  S  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_4275   271  CATGTATTACTGTGCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  100.0% (289/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                         M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)    IGHD6-13*01  5    -----------------------...............------------------------------------------------  19
J  100.0% (44/44)    IGHJ4*02     5    ------------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_75599

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           371     7e-105
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTAGA	TCAGGA	TGTACTAATACCAGCTGCT	CTCCGGAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTAGATCAGGATGTACTAATACCAGCTGCTCTCCGGATCTACTACTACGGTTTGGACGTC	AVDQDVLIPAALRIYYYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  V  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4276   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTGTTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  97.2% (244/251)  IGHV4-61*08  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  S  G  I  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4276   91   CTGGAGTGGATTGGGTATATCTATAACAGTGGGATCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  97.2% (244/251)  IGHV4-61*08  139  ........................T.........G.......................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       T  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  V  D  Q  D  V  L  I  P 
                    Query_4276   181  ACGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGGTAGATCAGGATGTACTAATACCA  270
V  97.2% (244/251)  IGHV4-61*08  229  .A.......................G........................................AG...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.5% (17/19)    IGHD2-2*01   8    -----------------------------------------------------------------------------....G..G.....  20

                                      CDR3-IMGT-------------------------->                                 
                                       A  A  L  R  I  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4276   271  GCTGCTCTCCGGATCTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  339
D  89.5% (17/19)    IGHD2-2*01   21   ......---------------------------------------------------------------  26
J  98.2% (54/55)    IGHJ6*02     8    --------------.............A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_302441

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           350     8e-99
IGHD2-15*01                                                                                           12.2    32   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAT	TAGCTG	TATCCGCGCCCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTAGCTGTATCCGCGCCCTACTACTTTGACTAC	ARRLAVSAPYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  T  N  S  N  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_4277   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCACCAATAGTAATTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (237/250)  IGHV4-39*01  49   ...............................G........G..G.....G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4277   91   CTGGAGTGGATTGCGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  94.8% (237/250)  IGHV4-39*01  139  .............G..................................................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  V  T  S  A  T  A  A  D  T  A  L  Y  Y  C  A  R  R  L  A  V  S  A  P 
                    Query_4277   181  AAGAACCAGTTCTCCCTGAGGGTGACCTCTGCGACCGCCGCAGACACGGCTCTATATTACTGTGCGAGACGATTAGCTGTATCCGCGCCC  270
V  94.8% (237/250)  IGHV4-39*01  229  ...................A.C...G.....T...................G.G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-15*01  19   -------------------------------------------------------------------------......-----------  24

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  S  L  V  A  V  S  S  
                    Query_4277   271  TACTACTTTGACTACTGGGGCCAGGGATCCCTGGTCGCCGTCTCCTCAG  319
J  95.8% (46/48)    IGHJ4*02     1    -..........................A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_13331

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-10*01                                                                                           37.2    1e-06
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TCAGACG	ATGGTTCGGGGAGTTATTA	ATGGTGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATCAGACGATGGTTCGGGGAGTTATTAATGGTGTTTTTGATGTC	ARDQTMVRGVINGVFDV	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  A  S  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4278   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGCTTCACACTATTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   ..............................................G.GGTT....C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  W  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  V  I  S  V  D  T  S 
                    Query_4278   91   CTGGAGTGGATTGGGTACATCTGGCACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTGTCATATCAGTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ......................ATT............................................AC...................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       Q  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  D  Q  T  M  V  R  G 
                    Query_4278   181  CAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCCTGTATTACTGTGCGAGGGATCAGACGATGGTTCGGGGA  270
V  94.4% (237/251)  IGHV4-31*03  229  A..................................................G................A..-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (19/19)   IGHD3-10*01  9    ------------------------------------------------------------------------------............  20

                                      MGT-------------------->                                  
                                       V  I  N  G  V  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4278   271  GTTATTAATGGTGTTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  328
D  100.0% (19/19)   IGHD3-10*01  21   .......---------------------------------------------------  27
J  100.0% (44/44)   IGHJ3*01     7    --------------............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_310852

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           324     8e-91
IGHD1-1*01                                                                                            12.2    34   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCAGGAT	GTACAA	GTGCCAGGTGATCTGCGGATA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAGATCAGGATGTACAAGTGCCAGGTGATCTGCGGATATACTTCTACGGTTTGGACGTC	AADQDVQVPGDLRIYFYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	229	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  A  T  D  L  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4279   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCGCCACTGATCTTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (229/251)  IGHV4-61*01  49   .......................................AG..G..G.AG........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  L  Y  Y  N  G  V  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  R  D  S  S 
                    Query_4279   91   CTGGAGTGGATTGGATATCTCTATTACAATGGGGTCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAAGAGACTCGTCC  180
V  91.2% (229/251)  IGHV4-61*01  139  ..............G...A.........G....AG...........................................GT....A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  M  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  A  D  Q  D  V  Q  V  P 
                    Query_4279   181  AAGAACCAGTTCTCCCTCAAGATGAACTCTGTGACCGCTGCGGACTCGGCCGTATATTATTGTGCGGCAGATCAGGATGTACAAGTGCCA  270
V  91.2% (229/251)  IGHV4-61*01  229  .................G...C...G...................A.......G.....C......AG...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-1*01   2    ------------------------------------------------------------------------------......------  7

                                      CDR3-IMGT-------------------------->                                 
                                       G  D  L  R  I  Y  F  Y  G  L  D  V  W  G  L  G  T  T  V  T  V  S  S 
                    Query_4279   271  GGTGATCTGCGGATATACTTCTACGGTTTGGACGTCTGGGGCCTAGGGACCACGGTCACCGTCTCCTCA  339
J  94.4% (51/54)    IGHJ6*02     9    ---------------....A.......A...............A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_310853

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4280   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_4280   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_4280   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_4280   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_146671

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           358     4e-101
IGHD3-3*01                                                                                            43.0    2e-08 
IGHJ5*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGGCGAGGCC	GTATTACGACTTTTGGAGTGGTTGTTAT	CGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGCGAGGCCGTATTACGACTTTTGGAGTGGTTGTTATCGGCTGGTTCGACCCC	ARGGRGRITTFGVVVIGWFDP	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_4281   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTATTATTGGAGCTGGATCCGCCAGTCTCCAGGGAAGGGGCTGGAA  90
V  96.7% (237/245)  IGHV4-34*01  49   ...............................................C..C..................C.C.................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  K  K 
                    Query_4281   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAAGAAA  180
V  96.7% (237/245)  IGHV4-34*01  139  ............................................................G............................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  R  G  R  I  T  T  F 
                    Query_4281   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGGGGCGAGGCCGTATTACGACTTTT  270
V  96.7% (237/245)  IGHV4-34*01  229  ....................C............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  92.9% (26/28)    IGHD3-3*01   1    ----------------------------------------------------------------------------.........T....  14

                                      MGT-------------------------->                                  
                                       G  V  V  V  I  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4281   271  GGAGTGGTTGTTATCGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  334
D  92.9% (26/28)    IGHD3-3*01   15   .........A....--------------------------------------------------  28
J  97.9% (46/47)    IGHJ5*02     5    -----------------..........................................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_146670

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         383     1e-108
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCTTAAGGTCAATCGCGTC	CAGTGGCTGG	GCGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCA	ARHPLRSIASSGWAS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_4282     1    GCAGCTGGTGCAGTCTGGAGGAGAGGTGAAGAAGCCCGGGGAGTCTTTGAGGATTTCCTGTAAGGCTTCTGGATACACCTTTACCAACTA  90
V  92.4% (267/289)  IGHV5-10-1*01  6    ....................C.........A...............C.......C..........G...........G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  S  Y  S  P
                    Query_4282     91   CTGGATCAGCTGGGTGCGTCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGACCCTAGTGACTCTTATACCAGCTACAGTCC  180
V  92.4% (267/289)  IGHV5-10-1*01  96   ..................C...A.....................................T...................A......C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          F  F  D  G  N  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  M  A  S  D  T  A
                    Query_4282     181  GTTCTTCGACGGCAACGTCACCATCTCAGTTGACAAGTCCATCAGTACTGCCTATTTGCAGTGGAGCAGCCTGATGGCCTCGGACACCGC  270
V  92.4% (267/289)  IGHV5-10-1*01  186  ..C....C.A...C...............C...............C........CC..................A...............  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          M  Y  Y  C  A  R  H  P  L  R  S  I  A  S  S  G  W  A  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4282     271  CATGTATTATTGTGCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCATGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  92.4% (267/289)  IGHV5-10-1*01  276  .........C.........-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD6-19*01    9    ------------------------------------------..........--------------------------------------  18
J  100.0% (34/34)   IGHJ4*02       15   ----------------------------------------------------------................................  46

                                          
                                          
                    Query_4282     361  AG  362
J  100.0% (34/34)   IGHJ4*02       47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_146673

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           330     1e-92
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TGGACTTCAGTC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGACTTCAGTCCTTTGACTAC	ARDGLQSFDY	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	231	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  G  V  G  Y  L  W  S  W  I  R  Q  Q  P  G  K  G 
                    Query_4283   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATAAGTGGTGTTGGTTATCTCTGGAGCTGGATCCGCCAGCAGCCAGGGAAGGGC  90
V  92.0% (231/251)  IGHV4-31*03  49   ..................A...................C..CA...G......CTA.....................C............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  H  T  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  E  T  S 
                    Query_4283   91   CTGGAGTGGATTGGGTACATCTTTCACACTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATTTCACTAGAGACGTCT  180
V  92.0% (231/251)  IGHV4-31*03  139  ......................A.T...G.............................A.........T.....A...G....C......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       K  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  L  Q  S  F  D 
                    Query_4283   181  AAAAACCAGTTCTCCCTGAGGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGGACTTCAGTCCTTTGAC  270
V  92.0% (231/251)  IGHV4-31*03  229  ..G................A.....G.............................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_4283   271  TACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  307
J  97.7% (43/44)    IGHJ4*02     12   ........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_146672

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           364     5e-103
IGHD3-10*01                                                                                           21.8    0.044 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGGA	CATCGA	ATTACTATGGT	AATTGGGGGGGGATTTATTG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGACATCGAATTACTATGGTAATTGGGGGGGGATTTATTGCGGTATGGACGTC	ARTSNYYGNWGGIYCGMDV	263	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	47	4	0	92.2
CDR2-IMGT	128	148	21	20	1	0	95.2
FR3-IMGT	149	262	114	105	9	0	92.1
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	269	251	18	0	93.3


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  N  T  K  G  M  Y  V  S  W  I  R
                    Query_4284   1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCAACACTAAGGGAATGTATGTGAGTTGGATCCG  90
V  93.3% (251/269)  IGHV2-70*01  30   ...........................................................G.....GT.......G......C........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  F  I  D  W  D  D  E  K  Y  Y  S  T  S  L  K  A  R  L  T
                    Query_4284   91   ACAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCCTTCATTGATTGGGATGATGAAAAATACTACAGCACGTCTCTGAAGGCCAGGCTCAC  180
V  93.3% (251/269)  IGHV2-70*01  120  T................................AC...................T..............A.........A..........  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  K  D  T  S  R  N  Q  V  V  L  I  M  T  N  M  D  P  G  D  T  T  S  Y  Y  C  A  R  T
                    Query_4284   181  CATCTCCAAGGACACCTCCAGAAACCAGGTGGTCCTTATAATGACCAATATGGACCCTGGGGACACAACCTCATATTACTGTGCACGGAC  270
V  93.3% (251/269)  IGHV2-70*01  210  ....................A.................C.........C..........T.......G..A.G................-  298
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                      ----------------CDR3-IMGT----------------------->                                 
                                        S  N  Y  Y  G  N  W  G  G  I  Y  C  G  M  D  V  W  G  Q  G  T  T  V  P  V  S  S 
                    Query_4284   271  ATCGAATTACTATGGTAATTGGGGGGGGATTTATTGCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCCCCGTCTCCTCA  352
D  100.0% (11/11)   IGHD3-10*01  3    -----...........------------------------------------------------------------------  13
J  97.8% (45/46)    IGHJ6*02     17   ------------------------------------..................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_146675

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD6-19*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	GTAGAGG	GCAGTGGCTGG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTAGAGGGCAGTGGCTGGAACTAC	ARVEGSGWNY	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  G  S  T  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_4285   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCGGCAGTACTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  95.2% (237/249)  IGHV4-39*01  49   ..................A....................A......G..........................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  I  D  T  S 
                    Query_4285   91   CTGGAGTGGATTGGGAGTATCTATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAAGAGTCGACTCACCATATCCATAGACACGTCC  180
V  95.2% (237/249)  IGHV4-39*01  139  ..........................T..............C........................G...........G...........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       E  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  V  E  G  S  G  W  N 
                    Query_4285   181  GAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTATCTATTACTGTGCCAGAGTAGAGGGCAGTGGCTGGAAC  270
V  95.2% (237/249)  IGHV4-39*01  229  A..................................................G.G...........G...---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD6-19*01  8    ----------------------------------------------------------------------------...........---  18
J  97.4% (38/39)    IGHJ4*02     10   ----------------------------------------------------------------------------------------..  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  I  S  S  
                    Query_4285   271  TACTGGGGCCAGGGAACCCTGGTCACCATCTCCTCAG  307
J  97.4% (38/39)    IGHJ4*02     12   ...........................G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_146674

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           343     2e-96
IGHD2-2*01                                                                                            12.2    33   
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTCC	TACCAACTACTA	ACGAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCTACCAACTACTAACGACCTACTCCTACGCTATGGACGTC	ARGSYQLLTTYSYAMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  R  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4286   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTCAGGAACTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-48*03  47   .....................C.....................T.GT...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  Y  I  S  T  S  G  S  T  N  Y  N  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4286   91   ATTGGGTTTCATATATTAGTACTAGTGGTAGTACCAACTACAACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (234/249)  IGHV3-48*03  137  .G...........C.......G..............TA...T................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  T  P  E  D  T  A  V  Y  Y  C  A  R  G  S  Y  Q  L  L  T  
                    Query_4286   181  AGAATTCACTGTATTTGCAAATGAACAGCCTGACACCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGGTCCTACCAACTACTAACGA  270
V  94.0% (234/249)  IGHV3-48*03  227  ....C.........C..................G.G.................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  83.3% (10/12)    IGHD2-2*01   16   --------------------------------------------------------------------------.....G..G...----  27

                                      GT-------------------->                                 
                                      T  Y  S  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4286   271  CCTACTCCTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  96.4% (53/55)    IGHJ6*02     8    -.....A.....G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_58953

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           388     5e-110
IGHD3-22*01                                                                                           18.0    0.67  
IGHJ3*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAAAGAAACA	TATTCCTATGACAGT	GGCAGTGGAC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAAAGAAACATATTCCTATGACAGTGGCAGTGGACCTTTTGATATC	ARGKETYSYDSGSGPFDI	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_4287   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCTCCAGTTA  90
V  92.8% (269/290)  IGHV1-69*06  6    ..................................................................................AG...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  V  P  M  F  P  T  A  D  S  P  E
                    Query_4287   91   TGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCGTACCTATGTTTCCAACAGCAGACTCCCCCGA  180
V  92.8% (269/290)  IGHV1-69*06  96   ........G.................................................A.C.....C...GGT......A...A.G.AC.  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  E  D  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_4287   181  GAAGTTCGAGGACAGAGTCACGATTACCGCGGACAAATCAACGAGCACAGCCTACATGGAACTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  92.8% (269/290)  IGHV1-69*06  186  .......C...G...........................C....................G.............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  G  K  E  T  Y  S  Y  D  S  G  S  G  P  F  D  I  W  G  Q  G  T  M  V  T
                    Query_4287   271  CATGTATTATTGTGCGAGAGGGAAAGAAACATATTCCTATGACAGTGGCAGTGGACCTTTTGATATCTGGGGCCAAGGGACAATGGTCAC  360
V  92.8% (269/290)  IGHV1-69*06  276  .G.......C..........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  86.7% (13/15)    IGHD3-22*01  2    -------------------------------....A......T...--------------------------------------------  16
J  100.0% (45/45)   IGHJ3*02     6    --------------------------------------------------------..................................  39

                                                 
                                        V  S  S  
                    Query_4287   361  CGTCTCTTCAG  371
J  100.0% (45/45)   IGHJ3*02     40   ...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_247739

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           371     7e-105
IGHD3-3*01                                                                                            31.5    6e-05 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAGTCGTACCGGCTTTCCGGCAAATTCCCAATC	ACGATTTTTGGAGTGG	CTGACCGACGACAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCAGTCGTACCGGCTTTCCGGCAAATTCCCAATCACGATTTTTGGAGTGGCTGACCGACGACAAGTACGGTATGGACGTC	ARDLSRTGFPANSQSRFLEWLTDDKYGMDV	240	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	242	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4288   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (242/247)  IGHV3-53*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  T  G  D  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  K  
                    Query_4288   91   AGTGGGTCTCAGTTATTTATACCGGTGACAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATACCAAGA  180
V  98.0% (242/247)  IGHV3-53*01  137  .....................G.....GT......................................................T......  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><------------------------------
                                      N  M  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  S  R  T  G  F  P  
                    Query_4288   181  ACATGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGATCTCAGTCGTACCGGCTTTCCGG  270
V  98.0% (242/247)  IGHV3-53*01  227  ...C...............................................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          

                                      ----------CDR3-IMGT--------------------------------------->                               
                                      A  N  S  Q  S  R  F  L  E  W  L  T  D  D  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  
                    Query_4288   271  CAAATTCCCAATCACGATTTTTGGAGTGGCTGACCGACGACAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCT  360
D  100.0% (16/16)   IGHD3-3*01   6    -------------................-------------------------------------------------------------  21
J  100.0% (48/48)   IGHJ6*02     15   --------------------------------------------..............................................  60

                                        
                                      S 
                    Query_4288   361  CA  362
J  100.0% (48/48)   IGHJ6*02     61   ..  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_146679

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           335     4e-94
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_4289   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.9% (229/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  N  R  V  T  I  S  V  D  T  S 
                    Query_4289   91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAATCGAGTCACCATTTCCGTAGACACGTCC  180
V  93.9% (229/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C....G............A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_4289   181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  93.9% (229/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_4289   271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  319
J  97.9% (47/48)    IGHJ4*02     1    -....................................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_247737

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           355     3e-100
IGHD1-26*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTCCGGAG	GTGGGAGCTACT	CGTGGTCCTTTTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCGGAGGTGGGAGCTACTCGTGGTCCTTTTCCTAC	ARGSGGGSYSWSFSY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4290   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGCTTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-21*01  47   .............................................G.......A...A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  S  S  S  S  Y  M  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4290   91   AGTGGGTCTCATCCATTACTAGTAGTAGTAGTTACATGAACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (238/249)  IGHV3-21*01  137  ..................G..................AT...................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  S  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  G  S  G  G  G  S  Y  
                    Query_4290   181  AGAGCTCCCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTTCTGTGCGAGAGGGTCCGGAGGTGGGAGCTACT  270
V  95.6% (238/249)  IGHV3-21*01  227  ...A...A....A.......................................G....A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD1-26*01  7    ------------------------------------------------------------------------------............  18

                                      ---------------->                                  
                                      S  W  S  F  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4290   271  CGTGGTCCTTTTCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (38/38)   IGHJ4*02     11   -------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_247734

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           366     2e-103
IGHD6-13*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	N/A	GTATAGCAG	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGTATAGCAGCTTTGAGTAT	AREYSSFEY	261	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	23	1	0	95.8
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	18	3	0	85.7
FR3-IMGT	147	260	114	107	7	0	93.9
CDR3-IMGT (germline)	261	268	8	7	1	0	87.5
Total	N/A	N/A	268	251	17	0	93.7


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  
                    Query_4291   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGTACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGC  90
V  93.7% (251/268)  IGHV4-59*01  26   ................T.......................C.........................G.......................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  A  P  G  K  G  L  E  W  I  A  Y  I  H  Y  T  G  S  T  S  Y  N  P  S  L  R  S  R  A  T  
                    Query_4291   91   AGGCCCCCGGGAAGGGACTGGAGTGGATTGCGTATATTCATTACACTGGGAGCACCAGTTATAACCCCTCCCTCAGGAGTCGAGCCACCA  180
V  93.7% (251/268)  IGHV4-59*01  116  ..C....A......................G......CT......G...........AC..C.............A........T.....  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><--------C
                                      I  S  V  D  T  S  K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  E  
                    Query_4291   181  TATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGGGAGT  270
V  93.7% (251/268)  IGHV4-59*01  206  ....................................A......................................A.........A..--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     
D  100.0% (9/9)     IGHD6-13*01  3    ----------------------------------------------------------------------------------------..  4

                                      DR3-IMGT-------->                                  
                                      Y  S  S  F  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4291   271  ATAGCAGCTTTGAGTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (9/9)     IGHD6-13*01  5    .......--------------------------------------------  11
J  95.5% (42/44)    IGHJ4*02     5    -------......C..C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_84782

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD5-12*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCTACGAGGCGAGTCATCA	ATATAGTGGCT	TCATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATATCTACGAGGCGAGTCATCAATATAGTGGCTTCATGATTAATGACTAT	GKDIYEASHQYSGFMINDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4292   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGATATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-23*01  47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  G  I  S  E  S  G  G  S  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4292   91   ATTGGGTCTCAGGCATTAGTGAAAGTGGTGGTAGCACAAACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  94.8% (237/250)  IGHV3-23*01  137  .G..........CT.......GT...............T...............................................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  I  S  L  R  A  E  D  T  A  V  Y  Y  C  G  K  D  I  Y  E  A  S  H  
                    Query_4292   181  AGAACACCCTGTATCTACAAATGATCAGCCTCAGAGCCGAGGACACGGCCGTATATTACTGTGGGAAAGATATCTACGAGGCGAGTCATC  270
V  94.8% (237/250)  IGHV3-23*01  227  .......G........G.......A......G...............................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  F  M  I  N  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_4292   271  AATATAGTGGCTTCATGATTAATGACTATTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  333
D  100.0% (11/11)   IGHD5-12*01  5    -...........---------------------------------------------------  15
J  95.1% (39/41)    IGHJ4*02     8    ----------------------......C......................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_247732

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           353     1e-99
IGHD6-19*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AATTTCCTTGG	ATAGCAGTGG	TAATCCTCAGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAATTTCCTTGGATAGCAGTGGTAATCCTCAGGACGGTATGGACGTC	AREISLDSSGNPQDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4293   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-21*01  47   .....................................C......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  N  D  N  A  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4293   91   AGTGGGTCTCATCCATTAGTAATGATAATGCTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-21*01  137  .....................G.AG..G.AG...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  R  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  I  S  L  D  S  S  
                    Query_4293   181  AGAACTCACTGTATCTGCGAATGAACAGCCTGAGAGCCGACGACACGGCTGTTTATTACTGTGCGAGAGAAATTTCCTTGGATAGCAGTG  270
V  95.2% (238/250)  IGHV3-21*01  227  ..................A.....................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD6-19*01  5    ---------------------------------------------------------------------------------.........  13

                                      IMGT--------------------->                                 
                                      G  N  P  Q  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4293   271  GTAATCCTCAGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (10/10)   IGHD6-19*01  14   .----------------------------------------------------------  14
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_247733

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           355     3e-100
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAAAGCGGCCGCTT	ATAGTAGTGGTTATTACT	CCCTGACTGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAAAGCGGCCGCTTATAGTAGTGGTTATTACTCCCTGACTGTTTTTGACCAC	ARDKAAAYSSGYYSLTVFDH	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	239	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  S  S  I  N  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  A 
                    Query_4294   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTAGCTCCATCAACAGTGGAGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGCC  90
V  95.2% (239/251)  IGHV4-31*03  49   ..............................G.........G......T........................................G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  D  S  G  G  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 
                    Query_4294   91   CTGGAGTGGATTGGATACATCTATGACAGTGGGGGCACCTCCTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCAGTAGACAAGTCC  180
V  95.2% (239/251)  IGHV4-31*03  139  ..............G.........T........A......A...........................T................C...T  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  K  A  A  A  Y  S 
                    Query_4294   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGACAAAGCGGCCGCTTATAGT  270
V  95.2% (239/251)  IGHV4-31*03  229  ...................................T...................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (18/18)   IGHD3-22*01  12   -------------------------------------------------------------------------------------.....  16

                                      DR3-IMGT------------------------>                                  
                                       S  G  Y  Y  S  L  T  V  F  D  H  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4294   271  AGTGGTTATTACTCCCTGACTGTTTTTGACCACTGGGGTCAGGGAATCCTGGTCACCGTCTCCTCAG  337
D  100.0% (18/18)   IGHD3-22*01  17   .............------------------------------------------------------  29
J  93.0% (40/43)    IGHJ4*02     6    ------------------------......T.......C.......C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_247730

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           396     2e-112
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCCCGGCAGG	GTGGGATCTACT	TG	ACGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTC	ARHGPAGWDLLDAMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  N  F  N  S  N
                    Query_4295   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGTTCTGGATACAACTTTAACAGTAA  90
V  93.5% (272/291)  IGHV5-51*01  6    ....................................C.............A..........................G.....C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_4295   91   CTGGATCGGATGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACCAGATATAGGCC  180
V  93.5% (272/291)  IGHV5-51*01  96   .........C..................................................T.......................C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  T  A  D  K  S  T  T  T  A  Y  L  R  W  S  S  L  K  A  S  D  T  A
                    Query_4295   181  GTCCTTCCAAGGCCACGTCACCATTACAGCCGACAAGTCCACCACCACCGCCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.5% (272/291)  IGHV5-51*01  186  ...............G........CT...............T..G..............A..............................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        P  Y  Y  C  A  R  H  G  P  A  G  W  D  L  L  D  A  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_4295   271  CCCTTATTACTGTGCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  93.5% (272/291)  IGHV5-51*01  276  .ATG.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD1-26*01  7    ---------------------------------......G.....---------------------------------------------  18
J  97.9% (46/47)    IGHJ6*02     16   -----------------------------------------------...G.......................................  58

                                          
                                        S 
                    Query_4295   361  CTCA  364
J  97.9% (46/47)    IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_84786

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           330     1e-92
IGHD2-15*01                                                                                           21.8    0.043
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGAGTTCTCGTACTA	GTGGTAGGTGCTAC	ATGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGAGTTCTCGTACTAGTGGTAGGTGCTACATGTTCTACTACTACGCTGTGGACGTC	AGSSRTSGRCYMFYYYAVDV	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	248	3	3	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  N  V  S  G  V  S  I  S  T  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_4296   4    CCCTGAGACTCTCCTGTAATGTCTCTGGTGTCTCCATCAGTACTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  93.1% (228/245)  IGHV4-39*01  50   .....TCC...A....C.C...........G.........C.G..G..........................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  M  G  S  I  Y  H  S  G  S  A  F  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  T  S  
                    Query_4296   94   TGGAGTGGATGGGGAGTATCTATCATAGTGGGAGCGCCTTCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCCGTAGACACGTCCA  183
V  93.1% (228/245)  IGHV4-39*01  140  ..........T............T...........A...A................A................A................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  R  T  S  G  R  
                    Query_4296   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGGGGAGTTCTCGTACTAGTGGTAGGT  273
V  93.1% (228/245)  IGHV4-39*01  230  .................................................................-------------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD2-15*01  15   ---------------------------------------------------------------------------------.......C.  23

                                      R3-IMGT------------------------>                                 
                                      C  Y  M  F  Y  Y  Y  A  V  D  V  W  G  Q  R  T  T  I  T  V  S  S 
                    Query_4296   274  GCTACATGTTCTACTACTACGCTGTGGACGTCTGGGGCCAAAGGACCACGATCACCGTCTCCTCA  338
D  92.9% (13/14)    IGHD2-15*01  24   .....------------------------------------------------------------  28
J  92.7% (51/55)    IGHJ6*02     8    ----------...........G.A.................G........G..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_323565

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           380     1e-107
IGHD5-18*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	GGATACACCTATGGT	CA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGATACACCTATGGTCATGACTAC	AREGYTYGHDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  F  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  G  P  F  S  S  Y
                    Query_4297   1    GCAGCTGGTGCAGTCTGGAGCCGAGTTTAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGCAAGGCCTCTGGCGGCCCCTTCAGCAGTTA  90
V  91.8% (267/291)  IGHV1-69*01  6    ..................G..T...G.G......................A...............T.....A...A..........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  I  R  Q  A  P  G  L  G  L  E  W  M  G  G  I  I  P  I  L  G  P  A  N  Y  A  V
                    Query_4297   91   CGCTATTAGCTGGATTCGACAGGCCCCTGGACTAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCCTTGGTCCAGCAAACTACGCAGT  180
V  91.8% (267/291)  IGHV1-69*01  96   T.....C......G.G................A..................................T.....A..............CA  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  L  E  V  K  S  L  R  S  E  D  T  A
                    Query_4297   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACTTGGAGGTGAAAAGCCTGCGATCTGAGGACACGGC  270
V  91.8% (267/291)  IGHV1-69*01  186  .......................................................A.....C...GC......A................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                
                                        V  Y  Y  C  A  R  E  G  Y  T  Y  G  H  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4297   271  CGTGTATTATTGTGCGAGAGAAGGATACACCTATGGTCATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  348
V  91.8% (267/291)  IGHV1-69*01  276  .........C...........---------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                            
D  93.3% (14/15)    IGHD5-18*01  3    ----------------------.......G.......-----------------------------------------  17
J  100.0% (39/39)   IGHJ4*02     8    ---------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_113822

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            319     2e-89
IGHD1-7*01                                                                                            16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGCGA	CCGA	GGAACTAC	CAGGATGTTCGAGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGACCGAGGAACTACCAGGATGTTCGAGAATGCTCTTGATATC	AGDRGTTRMFENALDI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	248	8	6	2	0	75
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  G  V  S  G  G  A  I  S  S  S  H  W  W  N  W  V  R  Q  A  P  G  K  G  L 
                    Query_4298  1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGCGGCGCCATCAGCAGCAGTCACTGGTGGAATTGGGTCCGCCAGGCCCCCGGGAAGGGGCTG  90
V  91.1% (226/248)  IGHV4-4*02  49   ...................C.........T...T..........T...A.........G.............C....A............  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  Q  I  Y  H  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S  K 
                    Query_4298  91   GAGTGGATTGGGCAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAGGAGTCGAGTCAGCATCTCAATAGACACGTCCAAG  180
V  91.1% (226/248)  IGHV4-4*02  139  ............G..........................................A...........C...A...G......A.......  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                      H  Q  F  A  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  D  R  G  T  T  R  M  F 
                    Query_4298  181  CACCAGTTCGCCCTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGCGGGCGACCGAGGAACTACCAGGATGTTC  270
V  91.1% (226/248)  IGHV4-4*02  229  A........T........C...G...........................G.....C......A.A..----------------------  296
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD1-7*01  10   ------------------------------------------------------------------------........----------  17

                                     ----------------->                                  
                                      E  N  A  L  D  I  W  G  Q  G  T  T  V  I  V  S  S  
                    Query_4298  271  GAGAATGCTCTTGATATCTGGGGCCAAGGGACAACGGTCATCGTCTCTTCAG  322
J  93.8% (45/48)    IGHJ3*02    3    ----.....T........................T.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_113823

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*04                                                                                           296     2e-82
IGHD2-21*01                                                                                           10.3    124  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*04	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATAAAGACCCCGGAGGGCGC	CTATT	TCTCG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATAAAGACCCCGGAGGGCGCCTATTTCTCGTACTACGGTATGGACGTC	ARIKTPEGAYFSYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	218	29	0	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  I  A  S  G  F  T  F  S  D  F  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4299   1    GGTCCCTGAGACTCTCCTGTATAGCCTCTGGATTCACCTTCAGTGATTTTACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGC  90
V  88.3% (218/247)  IGHV3-21*04  47   ....................GC......................AGC.A..G.................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  S  S  G  T  Y  T  Y  Y  A  D  S  L  Q  G  R  F  T  I  A  R  D  N  A  
                    Query_4299   91   AGTGGGTGTCATCCATTAGTAGTAGTGGGACTTACACATACTACGCAGACTCACTTCAGGGCCGATTCACCATCGCCAGAGACAACGCCA  180
V  88.3% (218/247)  IGHV3-21*04  137  .......C..................A.T.G.....T................G.GA.................T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  R  S  L  Y  L  Q  V  N  S  L  R  T  E  D  T  G  I  Y  Y  C  A  R  I  K  T  P  E  G  A  
                    Query_4299   181  AGAGGTCTCTGTATCTCCAAGTGAACAGCCTGAGAACCGAGGACACCGGCATATATTATTGTGCGAGGATAAAGACCCCGGAGGGCGCCT  270
V  88.3% (218/247)  IGHV3-21*04  227  ...AC..A........G...A..............G..........G.C.G.G.....C........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  22   ----------------------------------------------------------------------------------------..  23

                                      IMGT--------------------->                              
                                      Y  F  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_4299   271  ATTTCTCGTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  326
D  100.0% (5/5)     IGHD2-21*01  24   ...-----------------------------------------------------  26
J  100.0% (48/48)   IGHJ6*02     12   --------................................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_113821

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           382     3e-108
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTA	ACGATTT	ACATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACGATTTACATTATGGTATGGACGTC	ARVNDLHYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4300   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATTCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (247/250)  IGHV4-31*01  49   ...................C................................................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 
                    Query_4300   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (247/250)  IGHV4-31*01  139  ..........................................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  D  L  H  Y  G 
                    Query_4300   181  AAGAACCAGCTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTTAACGATTTACATTATGGT  270
V  98.8% (247/250)  IGHV4-31*01  229  .........T............................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   6    -------------------------------------------------------------------------.......----------  12
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4300   271  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  312
J  100.0% (45/45)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_113827

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         371     6e-105
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTGG	CTATGGTTCGGGGAGTTATTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATCGTGGCTATGGTTCGGGGAGTTATTATTTTGACAAC	ARDRGYGSGSYYFDN	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4301     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  97.2% (244/251)  IGHV4-30-4*01  49   ..................A.......................................................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4301     91   CTGGAGTGGATTGGGTACATCCATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  97.2% (244/251)  IGHV4-30-4*01  139  .....................T............G.................................T.....................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  A  Y  H  C  A  R  D  R  G  Y  G  S  G 
                    Query_4301     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGCCTATCACTGTGCCAGAGATCGTGGCTATGGTTCGGGG  270
V  97.2% (244/251)  IGHV4-30-4*01  229  ....................................................TG...T.............-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01    7    -----------------------------------------------------------------------------.............  19

                                        ----------------->                                  
                                         S  Y  Y  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4301     271  AGTTATTATTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  322
D  100.0% (22/22)   IGHD3-10*01    20   .........-------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02       6    ---------......T...............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_113824

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           438     5e-125
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	71	0	0	100
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	113	1	0	99.1
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	290	285	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  
                    Query_4302   6    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACT  95
V  98.3% (285/290)  IGHV5-51*03  5    ...............................................................................C.......G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      F  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  
                    Query_4302   96   TCTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCC  185
V  98.3% (285/290)  IGHV5-51*03  95   A...................................................G............................G........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_4302   186  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCG  275
V  98.3% (285/290)  IGHV5-51*03  185  ..........................................................................................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-------------CDR3-IMGT------------>                                  
                                      A  M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4302   276  CCATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  98.3% (285/290)  IGHV5-51*03  275  ....................----------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    ---------------------......C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_323561

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           299     2e-83
IGHD1-26*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGGGGCGAA	ATAGTGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGGGGGGCGAAATAGTGGTTTTGACTAC	VKGGRNSGFDY	232	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	9	2	0	81.8
CDR1-IMGT	19	42	24	20	4	0	83.3
FR2-IMGT	43	93	51	49	2	0	96.1
CDR2-IMGT	94	117	24	23	1	0	95.8
FR3-IMGT	118	231	114	103	11	0	90.4
CDR3-IMGT (germline)	232	238	7	7	0	0	100
Total	N/A	N/A	231	211	20	0	91.3


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  N  F  S  N  Y  V  M  H  W  V  R  Q  A  P  G  R  G  L  E  Y  V  S  V  I  
                    Query_4303   8    GTGCAGCCTCCGGATTCAACTTCAGTAATTATGTTATGCACTGGGTCCGCCAGGCTCCAGGGAGGGGACTGGAATATGTTTCAGTTATTA  97
V  91.3% (211/231)  IGHV3-64*05  65   ..T.......T.......C........GC....C.............................A....................C.....  154
                                         S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  Y  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  K  G  G  S  T  Y  Y  A  D  S  L  K  G  R  F  T  M  S  R  D  N  S  K  N  T  V  Y  L  
                    Query_4303   98   GTAGTAAAGGGGGTAGCACATACTATGCAGACTCATTGAAGGGCAGATTCACCATGTCCAGAGACAATTCCAAGAACACGGTGTATCTTC  187
V  91.3% (211/231)  IGHV3-64*05  155  .......T.................C.........G...................C........................C.....G...  244
                                      S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  V  

                                      -------------------------------------------><-----------CDR3-IMGT----------->             
                                      Q  M  S  G  L  R  L  E  D  T  A  M  Y  Y  C  V  K  G  G  R  N  S  G  F  D  Y  W  G  Q  G  
                    Query_4303   188  AAATGAGTGGTCTGAGACTTGAGGACACGGCAATGTATTACTGTGTGAAAGGGGGGCGAAATAGTGGTTTTGACTACTGGGGCCAGGGAA  277
V  91.3% (211/231)  IGHV3-64*05  245  .......CA........GC............TG..................---------------------------------------  295
                                      Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                                         
D  100.0% (7/7)     IGHD1-26*01  4    ------------------------------------------------------------.......-----------------------  10
J  97.7% (42/43)    IGHJ4*02     6    --------------------------------------------------------------------......................  27

                                                           
                                      T  L  V  T  V  S  S  
                    Query_4303   278  CACTGGTCACCGTCTCCTCAG  298
J  97.7% (42/43)    IGHJ4*02     28   .C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_344749

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            420     7e-120
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	274	5	0	98.2


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_4304  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  98.2% (274/279)  IGHV6-1*01  26   ...........................................................G......G....AG.................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_4304  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.2% (274/279)  IGHV6-1*01  116  ..........................................................................................  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_4304  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.2% (274/279)  IGHV6-1*01  206  ..............A...........................................................................  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------CDR3-IMGT--------->                                  
                                     C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4304  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  98.2% (274/279)  IGHV6-1*01  296  .........---------------------------------------------------------  304
                                     C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02    4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_344748

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4305   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (239/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  P  S  K  N 
                    Query_4305   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACCCGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  ....................................................................A.........A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_4305   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  .............A.............................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4305   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_70418

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           23.8    0.011
IGHJ2*01                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAT	TATTTCCATGATAGTCGTGGT	G	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCATTATTTCCATGATAGTCGTGGTGACTGGTACTTCGATCTC	ARDHYFHDSRGDWYFDL	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  H  D  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4306   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTCACGACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-53*01  47   ............................................AG.A..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  H  R  D  G  K  T  D  Y  A  V  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_4306   91   AGTGGGTCTCAGTTATTCATAGGGATGGAAAAACAGACTATGCAGTCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.9% (232/247)  IGHV3-53*01  137  .................T....C.G...T.GC...T....C....A............................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------------CDR3-IMGT-
                                      N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  H  Y  F  H  D  S  R  
                    Query_4306   181  ACACTGTGTATCTTCAAATGAACAGCCTGCGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGACCATTATTTCCATGATAGTCGTG  270
V  93.9% (232/247)  IGHV3-53*01  227  ....GC.......................A.....................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  85.7% (18/21)    IGHD3-22*01  2    -----------------------------------------------------------------------....A.T........A...  20

                                      ------------------->                                  
                                      G  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4306   271  GTGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  85.7% (18/21)    IGHD3-22*01  21   ..----------------------------------------------------  22
J  100.0% (51/51)   IGHJ2*01     3    ---...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_70419

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           291     6e-81
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGGAGGGGGCTACGGGAATGTACTATAACGGACGG	CGGGGAGT	C	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGGAGGGGGCTACGGGAATGTACTATAACGGACGGCGGGGAGTCATGGACGTC	ARLEGATGMYYNGRRGVMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	43	8	0	84.3
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	217	31	0	87.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  R  N  T  D  F  W  V  W  I  R  Q  S  P  G  K  G 
                    Query_4307   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGGAATACTGACTTCTGGGTCTGGATACGTCAGTCTCCCGGGAAGGGG  90
V  87.5% (217/248)  IGHV4-39*01  49   .........................................C..T.G..G.T...A.....G......C..C...C.C..A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  A  I  H  Y  T  G  N  T  Y  Y  N  S  S  L  K  S  R  V  T  V  S  V  D  T  S 
                    Query_4307   91   CTGGAGTGGATTGGGGCTATCCATTATACTGGAAACACCTATTACAACTCGTCCCTCAAGAGTCGAGTCACCGTCTCCGTGGACACGTCC  180
V  87.5% (217/248)  IGHV4-39*01  139  ...............AG....T......G...G.G......C......C.......................A.A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  T  D  T  S  V  F  Y  C  A  R  L  E  G  A  T  G  M 
                    Query_4307   181  AAGAACCAGTTCTCCCTGAACCTAAGGTCTGTGACCGCCACAGACACGTCTGTTTTCTACTGTGCGAGGCTGGAGGGGGCTACGGGAATG  270
V  87.5% (217/248)  IGHV4-39*01  229  ....................G..G..C............G........G....G.AT...........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      DR3-IMGT------------------------>                                 
                                       Y  Y  N  G  R  R  G  V  M  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_4307   271  TACTATAACGGACGGCGGGGAGTCATGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  336
D  100.0% (8/8)     IGHD3-10*01  15   ---------------........-------------------------------------------  22
J  97.6% (41/42)    IGHJ6*02     21   ------------------------........................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_344741

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           349     2e-98
IGHD3-10*02                                                                                           27.6    8e-04
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-10*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGAGAGAAACCAAACC	TGTTCGGGGAGTTA	GTAGCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGAGAGAAACCAAACCTGTTCGGGGAGTTAGTAGCCCTTGACTAC	ARREKPNLFGELVALDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  S  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4308   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATCCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.1% (235/247)  IGHV3-30*03  47   ............................T....T........................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  M  I  S  Y  D  G  V  K  K  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  E  N  S  
                    Query_4308   91   AGTGGGTGGCAATGATATCATATGATGGAGTTAAGAAATATTATGCAGACTCCGTGAAGGGCCGATTCTCCATCTCCAGAGAAAATTCCA  180
V  95.1% (235/247)  IGHV3-30*03  137  ...........G.T...............AG...T.....C...........................A.............C.......  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  R  E  K  P  N  L  F  
                    Query_4308   181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGAGAGAGAAACCAAACCTGTTCG  270
V  95.1% (235/247)  IGHV3-30*03  227  .......G.............................T.............................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (14/14)   IGHD3-10*02  10   ------------------------------------------------------------------------------------......  15

                                      GT-------------------->                                  
                                      G  E  L  V  A  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4308   271  GGGAGTTAGTAGCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (14/14)   IGHD3-10*02  16   ........-------------------------------------------------  23
J  100.0% (42/42)   IGHJ4*02     7    ---------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_344740

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           363     1e-102
IGHD6-19*01                                                                                           21.8    0.040 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCAGG	GCAGTGGCTGG	CACG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTC	ARVPGQWLARGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4309   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (239/246)  IGHV3-53*01  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  M  Y  S  G  G  T  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_4309   91   AGTGGGTCTCAGTTATGTATAGCGGTGGGACCACATACTACGCAGAGTCCGTGAAGGGCCGATTCACCATCTCAAGAGACAATTCCAAGA  180
V  97.2% (239/246)  IGHV3-53*01  137  ................T...........T.G...............C..........................C................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  G  Q  W  L  A  R  
                    Query_4309   181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGTCCCAGGGCAGTGGCTGGCACGCG  270
V  97.2% (239/246)  IGHV3-53*01  227  ..................................................................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD6-19*01  8    -------------------------------------------------------------------------...........------  18
J  100.0% (46/46)   IGHJ6*02     17   ----------------------------------------------------------------------------------------..  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4309   271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (46/46)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_344743

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           260     1e-71
IGHD2-15*01                                                                                           21.8    0.045
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATAGGC	AGTGGTGGTGGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATAGGCAGTGGTGGTGGCTGCTACTTTGACAAC	ARRLGSGVPCTPFRIGSGGGCYFDN	246	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	18	8	0	69.2
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	99	15	0	86.8
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	207	41	0	83.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  P  G  D  S  I  S  S  D  S  F  Y  W  A  W  I  R  Q  S  P  V  K  G  
                    Query_4310   4    CCCTGAGACTCTCCTGTACTGTTCCCGGTGATTCCATCAGCAGTGACAGTTTCTACTGGGCCTGGATCCGCCAGTCCCCAGTGAAGGGAC  93
V  83.5% (207/248)  IGHV4-39*02  50   .....TCC...A....C.....CT.T....GC............AGT....A........G.............C......G......G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  T  M  F  N  G  G  R  T  Y  S  N  P  S  L  K  N  R  V  T  I  S  A  D  T  S  
                    Query_4310   94   TGGAGTGGATAGGGACTATGTTTAATGGTGGACGCACCTATTCCAACCCGTCCCTCAAGAATCGAGTCACCATATCTGCGGACACGTCCA  183
V  83.5% (207/248)  IGHV4-39*02  140  ..........T....G...C.A.T..A....GA.......C.A.................G...............C.TA..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      R  N  H  F  S  L  R  L  T  Y  V  T  S  A  D  S  G  V  Y  Y  C  A  R  R  L  G  S  G  V  P  
                    Query_4310   184  GGAACCACTTCTCCCTGAGGCTGACCTATGTGACCTCCGCAGACAGCGGTGTCTATTACTGTGCGAGACGTCTTGGGTCCGGTGTCCCCT  273
V  83.5% (207/248)  IGHV4-39*02  230  A.................A.....G..C.......G.........CG.C...G...............----------------------  297
                                      K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       

                                      -----CDR3-IMGT-------------------------------->                                 
                                      C  T  P  F  R  I  G  S  G  G  G  C  Y  F  D  N  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_4310   274  GTACTCCCTTCCGCATAGGCAGTGGTGGTGGCTGCTACTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  353
D  92.9% (13/14)    IGHD2-15*01  11   --------------------.........A....----------------------------------------------  24
J  97.8% (45/46)    IGHJ4*02     2    ----------------------------------..........T...................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_344742

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           372     2e-105
IGHD3-3*01                                                                                            44.9    5e-09 
IGHJ5*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCCA	TATTACGATTTTTGGAGTGGTTA	CCCAGGCCTCA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGATCCATATTACGATTTTTGGAGTGGTTACCCAGGCCTCACC	TTDPYYDFWSGYPGLT	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	247	9	0	96.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4311   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAATGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.5% (247/256)  IGHV3-15*01  47   .......T......................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  N  K  T  D  G  G  T  A  A  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_4311   91   AGTGGGTTGGCCGTATTAAAAACAAAACTGATGGTGGGACAGCAGCCTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  96.5% (247/256)  IGHV3-15*01  137  .....................G...................A...A............................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  R  N  T  V  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  D  P  Y  Y  D  
                    Query_4311   181  ATTCAAGAAACACGGTCTATTTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATCCATATTACGATT  270
V  96.5% (247/256)  IGHV3-15*01  227  ......A.......C.G...C.......................................................--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (23/23)   IGHD3-3*01   2    --------------------------------------------------------------------------------..........  11

                                      R3-IMGT------------------>                                  
                                      F  W  S  G  Y  P  G  L  T  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4311   271  TTTGGAGTGGTTACCCAGGCCTCACCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  330
D  100.0% (23/23)   IGHD3-3*01   12   .............-----------------------------------------------  24
J  97.2% (35/36)    IGHJ5*02     16   ------------------------...............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_344745

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           336     1e-94
IGHD3-10*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCACTC	CTATGGATCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTCCTATGGATCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_4312   4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  93.2% (232/249)  IGHV4-31*03  50   .....TCC...A.....A...........GG.......A...................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  
                    Query_4312   94   TGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTGGACACGTCTA  183
V  93.2% (232/249)  IGHV4-31*03  140  .................................G.................................T.....A.....A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  G  H  S  Y  G  S  G  
                    Query_4312   184  AGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTTTTACTGCGCGAGAGGTCACTCCTATGGATCGGGGA  273
V  93.2% (232/249)  IGHV4-31*03  230  ....................C...G...........................G.A......T.......---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  95.5% (21/22)    IGHD3-10*01  7    ----------------------------------------------------------------------------......T.......  20

                                      ---------------->                                  
                                      S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4312   274  GTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  95.5% (21/22)    IGHD3-10*01  21   ........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ---------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_70413

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_4313   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_4313   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_4313   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_4313   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_344747

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4314   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4314   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_4314   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4314   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_344746

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           316     2e-88
IGHD2-2*01                                                                                            14.1    8.7  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGCTCGTTGTGATAA	TACCATCTGC	CCGAAAAACTTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTCGTTGTGATAATACCATCTGCCCGAAAAACTTGCTGGTTCGACCCC	ARGLVVIIPSARKTCWFDP	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  D  I  S  I  N  T  G  D  Y  Y  W  S  W  F  R  Q  S  P  Q  K  G 
                    Query_4315   1    ACCCTGTCCCTCACCTGCACTGTCTCTGATATCTCCATCAACACCGGTGATTACTATTGGAGCTGGTTCCGCCAGTCCCCACAGAAGGGC  90
V  90.7% (225/248)  IGHV4-31*03  49   ............................G.GG........G..GT....G......C.........A........CA....GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  F  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S 
                    Query_4315   91   CTGGAATGGATTGGGTACATCTATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAGGAGTCGAGTTAGCATTTCCATAGACACGTCT  180
V  90.7% (225/248)  IGHV4-31*03  139  .....G..................................A.................A...........C...A..AG...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  V  V  I  I  P 
                    Query_4315   181  AAGAACCAGTTCTCCCTGAAGGTGAACTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGGGGGCTCGTTGTGATAATACCA  270
V  90.7% (225/248)  IGHV4-31*03  229  .....................C...G...........................G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.0% (9/10)     IGHD2-2*01   16   -------------------------------------------------------------------------------------.....  20

                                      3-IMGT----------------------->                                  
                                       S  A  R  K  T  C  W  F  D  P  W  G  P  G  T  L  V  S  V  S  S  
                    Query_4315   271  TCTGCCCGAAAAACTTGCTGGTTCGACCCCTGGGGCCCGGGAACCCTGGTCAGCGTCTCCTCAG  334
D  90.0% (9/10)     IGHD2-2*01   21   G....-----------------------------------------------------------  25
J  95.7% (45/47)    IGHJ5*02     5    -----------------....................A..............C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_318115

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           367     6e-104
IGHJ3*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TCTTCATCCGAGGGGTCCGGCCCCC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTCATCCGAGGGGTCCGGCCCCCGATGCTTTTGACATT	ARDLHPRGPAPDAFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	263	28	0	90.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  I  S  C  K  A  S  G  Y  T  F  T  K  Y
                    Query_4316   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCATCTGGATACACCTTCACCAAATA  90
V  90.4% (263/291)  IGHV1-46*01  6    ..................G.................................G.................................GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  L  H  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  L  I  N  P  S  G  G  I  T  A  Y  A  Q
                    Query_4316   91   CTATCTTCACTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGTTGGGATTAATAAACCCTAGTGGTGGTATCACAGCGTACGCACA  180
V  90.4% (263/291)  IGHV1-46*01  96   ....A.G.............................G.........A.....A....C................G....AGC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  L  T  M  S  R  D  T  S  T  S  T  V  Y  I  D  L  S  S  L  T  S  A  D  T  A
                    Query_4316   181  GAAGTTCCAGGGAAGACTCACCATGAGCAGGGACACGTCCACTTCTACAGTCTACATCGACCTGAGCAGCCTGACCTCTGCGGACACGGC  270
V  90.4% (263/291)  IGHV1-46*01  186  ............C...G.........C...............GAGC...........G..G.............GA....A.........  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  D  L  H  P  R  G  P  A  P  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S
                    Query_4316   271  CGTATACTACTGTGCGAGAGATCTTCATCCGAGGGGTCCGGCCCCCGATGCTTTTGACATTTGGGGCCAAGGGACAATGGTCACCGTCTC  360
V  90.4% (263/291)  IGHV1-46*01  276  ...G..T..............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
J  95.9% (47/49)    IGHJ3*02     2    ----------------------------------------------...........T..C.............................  45

                                           
                                        S  
                    Query_4316   361  TTCAG  365
J  95.9% (47/49)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_318117

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD6-19*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTA	GGGTATAGTAGTGGCTGGTAC	TATGACAAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTAGGGTATAGTAGTGGCTGGTACTATGACAAATTTGACTAC	AKDVGYSSGWYYDKFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4317   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGGCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ...............................................T...C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  G  S  G  S  I  R  E  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4317   91   AGTGGGTCTCAAGTGTTAGTGGAAGTGGTAGTATCAGAGAATACGCAGAATCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  ...........GC.A.......T......G...G..C.T.C........C........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  V  G  Y  S  S  G  
                    Query_4317   181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTATTGTGCGAAAGATGTAGGGTATAGTAGTGGCT  270
V  94.0% (235/250)  IGHV3-23*01  227  ..............C.....................................A.....C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.2% (20/21)    IGHD6-19*01  1    --------------------------------------------------------------------------........C.......  16

                                      GT-------------------->                                  
                                      W  Y  Y  D  K  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4317   271  GGTACTATGACAAATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.2% (20/21)    IGHD6-19*01  17   .....----------------------------------------------------  21
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_318111

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           329     3e-92
IGHD1-1*01                                                                                            18.0    0.60 
IGHJ3*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCACA	ACT	TACAACTGG	GACTTAGATGGTGTCA	ATGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAACTTACAACTGGGACTTAGATGGTGTCAATGTTTTTGATGTC	ATTYNWDLDGVNVFDV	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	102	12	0	89.5
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	232	22	0	91.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4318   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGGGCCTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.3% (232/254)  IGHV3-15*01  47   .......T.....................................AC..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  T  T  T  E  G  G  T  T  D  Y  V  A  P  V  R  G  R  L  S  M  S  R  D  
                    Query_4318   91   AGTGGGTTGGCCGTATTAAAACCACCACCGAAGGTGGGACAACAGACTATGTTGCACCCGTGAGAGGCAGACTCAGCATGTCAAGAGACG  180
V  91.3% (232/254)  IGHV3-15*01  137  .....................G..AA..T..T.................C.C...........A.......T...C...C........T.  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  K  N  T  L  F  L  Q  I  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  T  T  Y  N  W  D  
                    Query_4318   181  ATTCAAAGAACACACTGTTTCTACAAATAAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTGCCACAACTTACAACTGGGACT  270
V  91.3% (232/254)  IGHV3-15*01  227  .......A.....G....A...G.....G.......................................A.....----------------  300
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (9/9)     IGHD1-1*01   3    -----------------------------------------------------------------------------.........----  11

                                      R3-IMGT------------------>                                  
                                      L  D  G  V  N  V  F  D  V  W  G  Q  G  T  K  V  T  V  S  S  
                    Query_4318   271  TAGATGGTGTCAATGTTTTTGATGTCTGGGGCCAAGGGACAAAGGTCACCGTCTCTTCAG  330
J  95.8% (46/48)    IGHJ3*01     3    ------------...C..........................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_318110

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           304     1e-84
IGHD1-26*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCATACGCC	GTGGGAG	GAAGGGATGCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCATACGCCGTGGGAGGAAGGGATGCCCCTTGACTAC	ARDHTPWEEGMPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  L  S  R  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4319   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCATGCTTAGCAGATATGCCATGAGTTGGGTCCGCCAGGCCCCTGGGAAGGGGCTGG  90
V  88.8% (222/250)  IGHV3-23*01  47   ............................T.......CCT.......C...........C..............T..A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  E  N  T  Y  Y  A  D  S  E  K  G  Q  F  S  I  S  R  D  T  S  
                    Query_4319   91   AGTGGGTCTCGGGTATCAGCGGAAGTGGTGAAAACACATATTATGCAGACTCCGAGAAGGGTCAGTTCTCCATCTCCAGAGACACCTCCA  180
V  88.8% (222/250)  IGHV3-23*01  137  ..........A.C...T..T..T.......GT.G......C..C..........T......C.G....A...............AT....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  H  T  P  W  E  E  
                    Query_4319   181  AGAACACGCTGTATCTGCAGATCAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAGAGATCATACGCCGTGGGAGGAAG  270
V  88.8% (222/250)  IGHV3-23*01  227  ...................A..G...........................G...............A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD1-26*01  7    -------------------------------------------------------------------------------.......----  13

                                      ---------------->                                  
                                      G  M  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4319   271  GGATGCCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_140859

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-22*01                                                                                           25.7    0.003
IGHJ5*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGGGGCGCGCCC	GTATTACTTTGATAGT	CATAGGCCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCGGGGGCGCGCCCGTATTACTTTGATAGTCATAGGCCTTTCGACTCC	ARAGARPYYFDSHRPFDS	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_4320   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*01  49   ..........................................A....................................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  S  K  N 
                    Query_4320   91   TGGATTGGGTATATGTATTACAGTGGTAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCCTATCAGTAGACACGTCCAAGAAC  180
V  95.9% (234/244)  IGHV4-59*01  139  ..............C...........G......A................................A.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       L  F  S  L  K  L  F  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  A  R  P  Y  Y  F  D 
                    Query_4320   181  CTGTTCTCCCTGAAGCTGTTCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGCGGGGGCGCGCCCGTATTACTTTGAT  270
V  95.9% (234/244)  IGHV4-59*01  229  .A................AG........................................A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.8% (15/16)    IGHD3-22*01  1    -----------------------------------------------------------------------------........A....  13

                                      -------------------->                                  
                                       S  H  R  P  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_4320   271  AGTCATAGGCCTTTCGACTCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  93.8% (15/16)    IGHD3-22*01  14   ...----------------------------------------------------  16
J  95.3% (41/43)    IGHJ5*01     9    ------------.................A...A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_140858

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           347     7e-98
IGHD6-19*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGG	AGCAGTGGCTGGTA	TGATAGG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGAGCAGTGGCTGGTATGATAGGTGACTAT	ARDGAVAGMIGDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4321   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGATATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  94.4% (236/250)  IGHV3-21*01  47   ..............................................C..........................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  G  V  S  N  D  Y  K  Y  Y  A  D  S  L  M  G  R  F  T  I  S  R  D  N  A  
                    Query_4321   91   AGTGGGTCTCATCCATTGGTGTTAGTAATGATTACAAATACTACGCAGATTCACTGATGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-21*01  137  .................A..AG.....G.AG.....T............C...G...A................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  G  A  V  A  G  M  
                    Query_4321   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGAGACGGAGCAGTGGCTGGTATGA  270
V  94.4% (236/250)  IGHV3-21*01  227  ............A.......................C.................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD6-19*01  7    -------------------------------------------------------------------------..............---  20

                                      ---------->                                  
                                      I  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4321   271  TAGGTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (40/41)    IGHJ4*02     8    ----......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_68224

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD3-16*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4322   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (227/249)  IGHV4-61*01  49   .......................C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S 
                    Query_4322   91   CTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  91.2% (227/249)  IGHV4-61*01  139  ....A.........GT............G......CAC..A.........................G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y 
                    Query_4322   181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTAT  270
V  91.2% (227/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------------.....  28

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_4322   271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
D  100.0% (7/7)     IGHD3-16*02  29   ..--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_68225

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-72*01                                                                                           378     3e-107
IGHD6-19*01                                                                                           14.1    8.4   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-72*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATCCTCTTT	CAGTGGC	CCTGAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGAGAATCCTCTTTCAGTGGCCCTGAATTTGACTAC	ARESSFSGPEFDY	249	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	112	2	0	98.2
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	249	7	0	97.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  D  Y  Y  L  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_4323   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTCAGTGACTACTATTTGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.3% (249/256)  IGHV3-72*01  47   ........................C......................C....CA....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  T  R  N  K  A  N  S  Y  T  P  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_4323   91   AGTGGGTTGGCCGTACTAGAAACAAAGCTAACAGTTACACCCCAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  97.3% (249/256)  IGHV3-72*01  137  .........................................A................................................  226
                                      E  W  V  G  R  T  R  N  K  A  N  S  Y  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      D  S  Q  N  S  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  E  S  S  F  S  
                    Query_4323   181  ATTCACAGAACTCACTGTATCTGCAAATGAACAGCCTGAAGACCGAGGACACGGCCGTGTATTACTGTGCTAGAGAATCCTCTTTCAGTG  270
V  97.3% (249/256)  IGHV3-72*01  227  .....A..................................A...................................--------------  302
                                      D  S  K  N  S  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R                 
D  100.0% (7/7)     IGHD6-19*01  9    -------------------------------------------------------------------------------------.....  13

                                      GT-------------->                                  
                                      G  P  E  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4323   271  GCCCTGAATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (7/7)     IGHD6-19*01  14   ..-------------------------------------------------  15
J  100.0% (43/43)   IGHJ4*02     6    --------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_68226

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACAGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	268	18	0	93.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_4324   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  93.7% (268/286)  IGHV5-51*01  6    ..............................A...................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  Q  G  L  E  L  M  G  L  I  Y  P  G  D  S  D  T  W  Y  S  P
                    Query_4324   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCAAGGCCTGGAGTTGATGGGGCTCATCTATCCTGGTGACTCTGATACCTGGTACAGTCC  180
V  93.7% (268/286)  IGHV5-51*01  96   ......................A........A............G.......A..........................A.A.....C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  T  S  A  Y  L  Q  W  T  T  L  K  A  S  D  T  A
                    Query_4324   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCACCTCCGCCTACCTGCAGTGGACCACCCTGAAGGCCTCGGACACCGC  270
V  93.7% (268/286)  IGHV5-51*01  186  ....................C...................A...G.A..................G..G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4324   271  CATTTACTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACAGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  353
V  93.7% (268/286)  IGHV5-51*01  276  ...G..T.........-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------.................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_15506

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            427     1e-121
IGHD3-9*01                                                                                            18.0    0.67  
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGTCAT	TTACGATAT	ACGGGCCGGGT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTCATTTACGATATACGGGCCGGGTCTGGTTCGACCCC	ARGGHLRYTGRVWFDP	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	74	1	0	98.7
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	284	11	0	96.3


Alignments

                                     <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  S  T 
                    Query_4325  1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTCCACC  90
V  96.3% (284/295)  IGHV1-2*04  1    .......................G.............................................................T....  90
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                     GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                      D  Y  Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  D  P  N  S  G  G  T  K  Y 
                    Query_4325  91   GACTACTATGTGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCGACCCTAACAGTGGTGGCACAAAGTAT  180
V  96.3% (284/295)  IGHV1-2*04  91   .G.......A..............................................A......A......................C...  180
                                      G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                     -----------------------------------------------FR3-IMGT-----------------------------------
                                      A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  N  R  L  R  S  D  D 
                    Query_4325  181  GCACAGAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAACTGAACAGACTGAGATCTGACGAC  270
V  96.3% (284/295)  IGHV1-2*04  181  .................................................................G....G...G...............  270
                                      A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                     -----------------><-------------------CDR3-IMGT------------------>                        
                                      T  A  V  Y  Y  C  A  R  G  G  H  L  R  Y  T  G  R  V  W  F  D  P  W  G  Q  G  D  L  V  T 
                    Query_4325  271  ACGGCCGTATATTACTGTGCGAGAGGGGGTCATTTACGATATACGGGCCGGGTCTGGTTCGACCCCTGGGGCCAGGGAGACCTGGTCACC  360
V  96.3% (284/295)  IGHV1-2*04  271  ........G................-----------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (9/9)     IGHD3-9*01  4    ---------------------------------.........------------------------------------------------  12
J  95.7% (45/47)    IGHJ5*02    5    -----------------------------------------------------.........................AC..........  41

                                               
                                      V  S  S  
                    Query_4325  361  GTCTCCTCAG  370
J  95.7% (45/47)    IGHJ5*02    42   ..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_68220

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           346     2e-97
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGCGTCGAGGGCTCACGACATT	TATAGCAGTGGCTGG	GGGGGGCCGGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGCGTCGAGGGCTCACGACATTTATAGCAGTGGCTGGGGGGGGCCGGCTGACTAC	ARAASRAHDIYSSGWGGPADY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  D  S  G  F  T  F  S  S  H  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4326   1    GGTCCCTGAGACTCTCCTGTGCAGACTCTGGATTCACCTTCAGTAGCCACGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-30*03  47   ........................C......................T.T........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  S  Y  E  G  S  T  K  Y  Y  V  D  S  V  K  G  R  F  T  A  S  R  D  N  S  
                    Query_4326   91   AGTGGGTGGCTTTTATATCATATGAAGGAAGTACTAAATACTATGTAGACTCCGTGAAGGGCCGGTTCACCGCCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-30*03  137  ..........AG.............T.......A...........C..................A......AT.................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  A  A  S  R  A  H  D  
                    Query_4326   181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGAGCTGATGACACGGCTGTCTATTACTGTGCGAGAGCGGCGTCGAGGGCTCACGACA  270
V  94.4% (235/249)  IGHV3-30*03  227  .......G................................G...........G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      DR3-IMGT-------------------------->                                  
                                      I  Y  S  S  G  W  G  G  P  A  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_4326   271  TTTATAGCAGTGGCTGGGGGGGGCCGGCTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  339
D  100.0% (15/15)   IGHD6-19*01  4    --...............----------------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    ----------------------------..............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_68221

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           413     2e-117
IGHD1-26*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCTTCT	TGGGAGCT	TTGTGTCGCCCCGGGGGCACGCCAATA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CTTCTTGGGAGCTTTGTGTCGCCCCGGGGGCACGCCAATAAC	LLGSFVSPRGHANN	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	73	1	0	98.6
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	290	113	108	5	0	95.6
Total	N/A	N/A	286	275	11	0	96.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_4327   5    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  94
V  96.2% (275/286)  IGHV5-51*03  2    ..G.......................................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  H  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_4327   95   CCCACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGTTGGGAATCATCTATCCTGGTGACTCTGATACCAGATACA  184
V  96.2% (275/286)  IGHV5-51*03  92   G.T.........G.....................................A....G..................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  P  F  Q  G  H  V  T  I  S  A  D  T  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_4327   185  GCCCGCCCTTCCAAGGCCACGTCACCATCTCAGCCGACACGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACC  274
V  96.2% (275/286)  IGHV5-51*03  182  .....T.............G...................A........G........................................A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      P  A  M  Y  Y  C  L  L  G  S  F  V  S  P  R  G  H  A  N  N  W  G  Q  G  T  L  V  T  V  S  
                    Query_4327   275  CCGCCATGTATTACTGCCTTCTTGGGAGCTTTGTGTCGCCCCGGGGGCACGCCAATAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  364
V  96.2% (275/286)  IGHV5-51*03  272  ................--------------------------------------------------------------------------  287
                                      T  A  M  Y  Y                                                                             
D  100.0% (8/8)     IGHD1-26*01  8    ----------------------........------------------------------------------------------------  15
J  100.0% (36/36)   IGHJ4*02     13   ---------------------------------------------------------.................................  45

                                         
                                      S  
                    Query_4327   365  CAG  367
J  100.0% (36/36)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_68222

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AGCCTTTCACA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGAAGCCTTTCACATTGACTAC	GREAFHIDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  R  S  S  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4328   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGGAGTTCTAGCATGACCTGGGTCCGCCAGGCTCCGGGGAAGGGACTGG  90
V  92.0% (230/250)  IGHV3-21*01  47   ....................................C......T..C.A........A..................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  N  S  A  S  N  F  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_4328   91   AGTGGGTCTCATCCATTAATAGTGCTAGTAATTTCATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  92.0% (230/250)  IGHV3-21*01  137  ..................G....AG.....G..A....................................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  V  F  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  F  C  G  R  E  A  F  H  I  D  Y  
                    Query_4328   181  AGAACTCAGTCTTTCTGCAGATGAGCAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGGGAGAGAAGCCTTTCACATTGACTACT  270
V  92.0% (230/250)  IGHV3-21*01  227  ........C.G.A......A....A................................A.....C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------------.........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4328   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (42/42)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_140850

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         294     6e-82
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	GGAGTCGTAATTAT	CATGGGAATTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGAGTCGTAATTATCATGGGAATTTCTACTTCGACCAC	ARGSRNYHGNFYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	14	7	0	66.7
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  D  S  V  Y  Y  S  L  N  W  I  R  Q  T  P  L  K  G 
                    Query_4329     1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCATCGACAGTGTTTACTACTCCTTAAACTGGATCCGGCAGACACCACTGAAGGGC  90
V  87.6% (219/250)  IGHV4-30-2*01  49   .......................C...............AG.....G.GGT.......GG.G.............C.....GG.......  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Q  H  S  G  A  T  Y  Y  N  P  S  L  E  S  R  V  S  L  S  V  D  R  S 
                    Query_4329     91   CTGGAGTGGATTGGCTACATCCAGCATTCCGGGGCCACCTACTACAACCCGTCCCTCGAGAGTCGGGTCTCCCTTTCAGTAGACCGGTCC  180
V  87.6% (219/250)  IGHV4-30-2*01  139  ..............G......T.T...AGT...AG......................A.......A...A..A.A.........A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  S  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  R  N  Y  H  G 
                    Query_4329     181  AAGAGCCAGTTCTCCCTGAGGCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGAGGGAGTCGTAATTATCATGGG  270
V  87.6% (219/250)  IGHV4-30-2*01  229  ....A..............A.....G...........................G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  85.7% (12/14)    IGHD3-3*01     15   ----------------------------------------------------------------------.....G..T.....------  28

                                        ----------------->                                  
                                         N  F  Y  F  D  H  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_4329     271  AATTTCTACTTCGACCACTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTCAG  322
J  91.5% (43/47)    IGHJ4*02       2    -----......T...T...............C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_149538

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            361     4e-102
IGHD2-2*02                                                                                            19.9    0.16  
IGHJ4*02                                                                                              44.9    1e-08 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	CAGTCATTCGGC	AGTAGCAACTGCTATA	GTTGTGGGGGAGGCATGGGCCAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATCAGTCATTCGGCAGTAGCAACTGCTATAGTTGTGGGGGAGGCATGGGCCAG	AKDQSFGSSNCYSCGGGMGQ	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	251	9	9	0	0	100
Total	N/A	N/A	251	241	10	0	96


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  N  I  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4330  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACATTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.0% (241/251)  IGHV3-9*01  47   ....................................C.T...................................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  R  I  S  W  N  S  G  S  I  G  Y  A  G  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_4330  91   AGTGGGTCTCACGTATTAGTTGGAATAGTGGTAGTATAGGCTATGCGGGCTCTGTGCGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (241/251)  IGHV3-9*01  137  ...........G......................C.............A.......AA................................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------------CD
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  K  D  Q  S  F  G  S  S  
                    Query_4330  181  AGAATTCCCTCTATCTGCAAATGAACAGTCTGAGACCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATCAGTCATTCGGCAGTAGCA  270
V  96.0% (241/251)  IGHV3-9*01  227  ....C.....G........................G...................................-------------------  297
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  87.5% (14/16)    IGHD2-2*02  14   -----------------------------------------------------------------------------------....C..  20

                                     R3-IMGT------------------------>                                
                                     N  C  Y  S  C  G  G  G  M  G  Q  W  G  R  G  P  L  V  S  V  S  S
                    Query_4330  271  ACTGCTATAGTTGTGGGGGAGGCATGGGCCAGTGGGGCCGGGGACCCCTGGTCAGCGTCTCCTC  334
D  87.5% (14/16)    IGHD2-2*02  21   G........-------------------------------------------------------  29
J  90.6% (29/32)    IGHJ4*02    15   --------------------------------.......A....A.........C.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_336051

Length=407
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            438     5e-125
IGHD2-15*01                                                                                           19.9    0.18  
IGHJ5*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTATCGATATATAGGGA	TGGTAGCTGC	GGCGCGGCAGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTATCGATATATAGGGATGGTAGCTGCGGCGCGGCAGGACTGGTTCGACCCC	ARGYRYIGMVAAARQDWFDP	290	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	110	4	0	96.5
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	294	287	7	0	97.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  
                    Query_4331   3    AGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCG  92
V  97.6% (287/294)  IGHV1-2*04   2    ....G........G............................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  
                    Query_4331   93   ACTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATG  182
V  97.6% (287/294)  IGHV1-2*04   92   G.........................................................................................  181
                                      G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  V  S  R  L  R  S  D  D  
                    Query_4331   183  CACAGAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGGTGAGCAGGCTGAGATCTGACGACA  272
V  97.6% (287/294)  IGHV1-2*04   182  .................................................................C........................  271
                                      A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  

                                      ----------------><-------------------------CDR3-IMGT------------------------>             
                                      T  A  V  D  C  C  A  R  G  Y  R  Y  I  G  M  V  A  A  A  R  Q  D  W  F  D  P  W  G  Q  G  
                    Query_4331   273  CGGCCGTGGATTGTTGTGCGAGAGGTTATCGATATATAGGGATGGTAGCTGCGGCGCGGCAGGACTGGTTCGACCCCTGGGGCCAGGGAA  362
V  97.6% (287/294)  IGHV1-2*04   272  ........T...AC..........------------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD2-15*01  16   ------------------------------------------..........--------------------------------------  25
J  97.9% (47/48)    IGHJ5*02     4    ---------------------------------------------------------------...........................  30

                                                           
                                      T  L  V  S  V  S  S  
                    Query_4331   363  CCCTGGTCTCCGTCTCCTCAG  383
J  97.9% (47/48)    IGHJ5*02     31   ........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39867768


Query= Query_331658

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            302     3e-84
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	247	222	22	3	89.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4332   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCGGGAAAGGGGCTG  87
V  89.9% (222/247)  IGHV4-4*02   49   ..................GC.........T...TCC......A..AG........GG....................A..G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  K 
                    Query_4332   88   GAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCAAG  177
V  89.9% (222/247)  IGHV4-4*02   139  .......................T......A................................G.......A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G  W 
                    Query_4332   178  AATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGTGGGTAGCAGTGGCTGG  267
V  89.9% (222/247)  IGHV4-4*02   229  ..CC.GT..........G....GC..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-19*01  6    -----------------------------------------------------------------------------.............  18

                                      -------->                                
                                       L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_4332   268  CTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  308
J  95.0% (38/40)    IGHJ4*02     7    -......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_149533

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            321     7e-90
IGHD2-21*02                                                                                           14.1    8.6  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCTCTCCTAGAA	GTGACTG	GGCGAGGGGGGGGACT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCTCTCCTAGAAGTGACTGGGCGAGGGGGGGGACTTGGTTCGACCCC	AASPRSDWARGGTWFDP	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  D  S  I  G  I  T  K  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4333   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCATCGGCATTACTAAGTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  92.2% (224/243)  IGHV4-4*02   49   ...............................G.......A...G..G...C.......................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  A  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  D  I  S  V  D  K  S  K 
                    Query_4333   91   GAGTGGATTGGGGAAGCCTATTATAGTGGGAGCACCAACTACAACCCGTCCCTCAAAAGTCGAGTCGACATATCGGTAGATAAGTCCAAG  180
V  92.2% (224/243)  IGHV4-4*02   139  ...............AT....C..................................G.........AC......A.....C.........  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  A  S  P  R  S  D  W  A  R 
                    Query_4333   181  AACCAGTTCTCCCTGAAGTTAACCTCTATGACCGCCGCGGACACGGCCGTATATTATTGTGCGGCCTCTCCTAGAAGTGACTGGGCGAGG  270
V  92.2% (224/243)  IGHV4-4*02   229  ..................C.G.G....G......................G.....C......---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD2-21*02  15   ----------------------------------------------------------------------------.......-------  21

                                      -------------------->                                  
                                       G  G  T  W  F  D  P  W  G  Q  G  I  Q  V  I  V  S  S  
                    Query_4333   271  GGGGGGACTTGGTTCGACCCCTGGGGCCAGGGAATCCAGGTCATCGTCTCCTCAG  325
J  93.5% (43/46)    IGHJ5*02     6    ---------.........................C..T.....C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_149532

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           277     9e-77
IGHD6-19*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTGGTCGTC	AGCAGTGGCTGG	CCCTGGACGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGGTCGTCAGCAGTGGCTGGCCCTGGACGGC	ATGRQQWLALDG	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	13	8	0	61.9
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	209	32	0	86.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  F  G  E  S  F  T  S  H  F  R  I  W  V  R  Q  T  P  G  K  G  L  E 
                    Query_4334   1    ACCCTGTCCCTCACCTGCGCTGTCTTTGGTGAGTCCTTCACTAGTCACTTCCGGATCTGGGTCCGCCAGACCCCCGGGAAGGGGCTGGAG  90
V  86.7% (209/241)  IGHV4-34*01  49   .........................A.....G........G.G..T...A.T...G....A........C....A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  S  N  Q  R  Q  R  S  K  Y  N  P  S  L  K  S  R  V  T  I  L  G  D  T  S  K  N 
                    Query_4334   91   TGGATTGGGGAAAGTAATCAGCGTCAAAGAAGCAAATACAATCCGTCCCTAAAGAGTCGAGTCACCATCTTAGGAGACACGTCCAAGAAT  180
V  86.7% (209/241)  IGHV4-34*01  139  .............TC.....TA..GG...C.C...C.....C........C.................A.C..T...............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  R  Q  Q  W  L  A  L  D 
                    Query_4334   181  CAGTTCTCTCTGAGGCTCAATTCTGTGACCGCCGCGGACACGGCTGTGTATTATTGTGCGACTGGTCGTCAGCAGTGGCTGGCCCTGGAC  270
V  86.7% (209/241)  IGHV4-34*01  229  ........C....A...G.GC................................C.......-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (12/12)   IGHD6-19*01  7    ----------------------------------------------------------------------............--------  18

                                      -->                                  
                                       G  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4334   271  GGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (35/35)   IGHJ4*02     14   --...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_149531

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GAAGTACCTGAGGGGAAAT	TATGACAGTCGTGG	CCGACATACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGGAAGTACCTGAGGGGAAATTATGACAGTCGTGGCCGACATACCCCCTTTGAGTAC	GRKYLRGNYDSRGRHTPFEY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  D  Y  Y  M  T  W  T  R  Q  A  P  G  K  G  L  
                    Query_4335   1    GGTCCCTGAGACTCTCCTGTGTGGCCTCTGGATTCACCTTCAGTGACTACTACATGACATGGACCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-11*01  47   .....................CA..................................GC....T..........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  A  S  G  S  T  I  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_4335   91   AGTGGGTTTCATACATTAGTGCTAGTGGTAGCACCATATACTACGCAGACTCTGTGGAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  93.9% (232/247)  IGHV3-11*01  137  ....................AG.........T........................A.................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  E  L  Q  M  N  G  L  R  I  E  D  T  A  V  Y  Y  C  G  R  K  Y  L  R  G  N  Y  
                    Query_4335   181  AGAACTCACTGGAGCTGCAAATGAACGGCCTGAGAATCGAGGACACGGCCGTGTATTACTGTGGGAGGAAGTACCTGAGGGGAAATTATG  270
V  93.9% (232/247)  IGHV3-11*01  227  ...........T.T............A........GC..........................C...-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  85.7% (12/14)    IGHD3-22*01  8    --------------------------------------------------------------------------------------....  11

                                      R3-IMGT------------------------>                                  
                                      D  S  R  G  R  H  T  P  F  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4335   271  ACAGTCGTGGCCGACATACCCCCTTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  85.7% (12/14)    IGHD3-22*01  12   .T...A....--------------------------------------------------------  21
J  97.7% (43/44)    IGHJ4*02     5    ----------------------......C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_149530

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_4336   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_4336   91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y 
                    Query_4336   181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTAC  270
V  91.4% (223/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD2-2*01   8    ---------------------------------------------------------------------........T........----  24
J  88.5% (46/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_4336   271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  318
J  88.5% (46/52)    IGHJ6*02     15   ...GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_149537

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            327     8e-92
IGHD3-16*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCAGCCTGATCGGGACAG	TGCTTAT	N/A	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCAGCCTGATCGGGACAGTGCTTATTAC	ASQPDRDSAYY	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  I  S  G  V  S  F  S  R  N  N  W  W  S  W  V  R  Q  P  P  G  K  R  L 
                    Query_4337   1    ACCCTGTCCCTCACCTGCGCTATATCTGGTGTCTCCTTCAGTAGAAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGAGACTG  90
V  92.7% (227/245)  IGHV4-4*02   49   .....................G.C.......G....A....C..T.G.....................................G.G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  D  S  G  S  T  N  Y  N  E  S  L  K  S  R  V  T  I  S  I  D  K  S  K 
                    Query_4337   91   GAGTGGATTGGGGAAATCTCTGATAGTGGGAGCACCAACTACAACGAGTCTCTCAAGAGTCGAGTCACCATATCAATAGACAAGTCCAAG  180
V  92.7% (227/245)  IGHV4-4*02   139  ...................A.C.......................CC...C........................G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  H  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  Q  P  D  R  D  S  A  Y 
                    Query_4337   181  AACCAATTCTCCCTGCATCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGCCAGCCTGATCGGGACAGTGCTTAT  270
V  92.7% (227/245)  IGHV4-4*02   229  .....G.........A.G...............................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-16*01  28   -----------------------------------------------------------------------------------.......  34

                                      -->                                  
                                       Y  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_4337   271  TACTGGGGCCAGGGAACCCTGGCCACCGTCTCCTCAG  307
J  97.3% (36/37)    IGHJ4*02     12   ......................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_149536

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           382     3e-108
IGHD3-16*02                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	GATTACGTTTGGGGGAATTATCGT	CACCTTCCCGGC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGATTACGTTTGGGGGAATTATCGTCACCTTCCCGGCGACTTC	AREDYVWGNYRHLPGDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4338   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-33*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  V  S  N  K  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4338   91   AGTGGGTGGCAGTTATATGGTATGATGTAAGTAATAAATACTATACAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  98.8% (247/250)  IGHV3-33*01  137  ...........................G................G.............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  D  Y  V  W  G  N  
                    Query_4338   181  AGAACACGCTGTACCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGGATTACGTTTGGGGGAATT  270
V  98.8% (247/250)  IGHV3-33*01  227  .............T........................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.8% (23/24)    IGHD3-16*02  8    -----------------------------------------------------------------------................G..  26

                                      GT-------------------->                                  
                                      Y  R  H  L  P  G  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4338   271  ATCGTCACCTTCCCGGCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.8% (23/24)    IGHD3-16*02  27   .....----------------------------------------------------  31
J  97.5% (39/40)    IGHJ4*02     9    -----------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_149535

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           332     3e-93
IGHD3-16*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCTAGGG	ATGCTTA	CAATCTATGCGGCT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAAAGACCTAGGGATGCTTACAATCTATGCGGCTGACCTC	TKDLGMLTIYAADL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  G  M  H  W  V  R  L  A  P  G  K  G  L  
                    Query_4339   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGCCTATGGCATGCACTGGGTCCGCCTGGCTCCAGGCAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-30*18  47   ............................................AG.......................A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  V  V  H  D  G  S  K  R  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4339   91   AGTGGGTGGCAGCTGTAGTCCATGATGGAAGTAAGAGATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.4% (231/250)  IGHV3-30*18  137  ............T.A..TCAT.............T.A.....................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  K  K  V  F  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  T  K  D  L  G  M  L  T  I  
                    Query_4339   181  AGAAAAAGGTGTTTCTACAAATGAACAGCCTGAGAGCTGAGGACACGGCTATCTATTACTGTACGAAAGACCTAGGGATGCTTACAATCT  270
V  92.4% (231/250)  IGHV3-30*18  227  ....C.C.C...A...G.................................G.G.........G.......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-16*01  27   -----------------------------------------------------------------------------.......------  33

                                      ------------->                                  
                                      Y  A  A  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4339   271  ATGCGGCTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.5% (39/40)    IGHJ5*02     12   --------....C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_148665

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           363     1e-102
IGHD3-16*01                                                                                           12.2    32    
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGA	GGGGGGGTT	GGCGGGAGCCTTGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGAGGGGGGGTTGGCGGGAGCCTTGTACTACTTTGACAAC	ARDEGGLAGALYYFDN	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4340   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCAGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-33*01  47   ............................T.................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  Y  G  G  N  N  K  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_4340   91   AGTGGGTGGCACTTATATGGTATGGTGGAAATAATAAATACTATGCAGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.4% (241/250)  IGHV3-33*01  137  ...........G............A.....G.........................A.................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  V  D  D  T  A  V  Y  Y  C  A  R  D  E  G  G  L  A  G  
                    Query_4340   181  AGAACACGCTGTATCTGCAAATGGACAGCCTGAGAGTCGACGACACGGCTGTGTATTACTGTGCGAGAGATGAGGGGGGGTTGGCGGGAG  270
V  96.4% (241/250)  IGHV3-33*01  227  .......................A............C...G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD3-16*01  18   -------------------------------------------------------------------------.....A...--------  26

                                      T------------------>                                  
                                      A  L  Y  Y  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4340   271  CCTTGTACTACTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.9% (47/48)    IGHJ4*02     1    ------...........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_148666

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           350     8e-99
IGHD3-3*01                                                                                            21.8    0.042
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCCGC	ACGTTTTTTGGAGT	CATTAGAGTAATC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCCGCACGTTTTTTGGAGTCATTAGAGTAATCGATGCTTTTGATATC	AGRTFFGVIRVIDAFDI	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	235	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  M  S  R  G  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_4341   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATGAGTAGGGGTGGTTACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGG  90
V  95.5% (235/246)  IGHV4-39*01  49   ...................C..................C..C..TA..A......................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  S  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  G  V  T  I  S  V  D  T  S 
                    Query_4341   91   CTGGAGTGGATTGGGAGTAGTTATTATAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTGGAGTCACCATATCCGTAGACACGTCC  180
V  95.5% (235/246)  IGHV4-39*01  139  ...................TC.............G............................C..........................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  R  T  F  F  G  V  I 
                    Query_4341   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGGGCCGCACGTTTTTTGGAGTCATT  270
V  95.5% (235/246)  IGHV4-39*01  229  ..................................................................------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  92.9% (13/14)    IGHD3-3*01   6    ------------------------------------------------------------------------...A..........----  19

                                      MGT-------------------->                                  
                                       R  V  I  D  A  F  D  I  W  G  Q  G  T  K  V  I  V  S  S  
                    Query_4341   271  AGAGTAATCGATGCTTTTGATATCTGGGGCCAAGGGACAAAGGTCATCGTCTCTTCAG  328
J  95.9% (47/49)    IGHJ3*02     2    ---------...............................T.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_148660

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           363     1e-102
IGHD5-18*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGT	TGGATACAACTATGGTTAC	CCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTTGGATACAACTATGGTTACCCTCACTTTGACTAC	ARGVGYNYGYPHFDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	238	6	0	97.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4342   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.5% (238/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  F  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_4342   91   TGGATTGGCTTTATCTATTACACTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGTGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.5% (238/244)  IGHV4-59*01  139  ........G.A...........G......C.............................A..............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  Y  N  Y  G  Y  P 
                    Query_4342   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGGTTGGATACAACTATGGTTACCCT  270
V  97.5% (238/244)  IGHV4-59*01  229  ................................T...............................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD5-18*01  2    --------------------------------------------------------------------........G..........---  20

                                      ----------->                                  
                                       H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4342   271  CACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (45/45)   IGHJ4*02     4    -.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_148661

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           349     3e-98
IGHD2-15*01                                                                                           39.1    3e-07
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	T	GGATATTGTCGTGGTGGTGCCTGCTACTC	AACGGGTCGGGGGACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGATATTGTCGTGGTGGTGCCTGCTACTCAACGGGTCGGGGGACTTTTGACTAC	ARHGYCRGGACYSTGRGTFDY	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  S  T  H  H  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_4343   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGACTCCATCAGCAGCAGTACTCACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.4% (237/251)  IGHV4-39*01  49   .............................T.G............T....G.T..T...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  V  Y  Y  S  G  R  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4343   91   CTGGAGTGGATTGGGAGTGTCTATTATAGTGGGAGAACCTACGACAACCCGTCTCTCAAGAGTCGAGTCACCATATCTGTCGACACGTCC  180
V  94.4% (237/251)  IGHV4-39*01  139  ..................A................C......T..........C.......................C..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  H  G  Y  C  R  G  G 
                    Query_4343   181  AAGAATCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTTTTACTGTGCGAGACATGGATATTGTCGTGGTGGT  270
V  94.4% (237/251)  IGHV4-39*01  229  .....C.................................................A...............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.7% (26/29)    IGHD2-15*01  2    ------------------------------------------------------------------------.........A........  19

                                      CDR3-IMGT-------------------------->                                  
                                       A  C  Y  S  T  G  R  G  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4343   271  GCCTGCTACTCAACGGGTCGGGGGACTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  89.7% (26/29)    IGHD2-15*01  20   AG.........-----------------------------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_148662

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_4344   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG....T..............A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  P  K  N 
                    Query_4344   91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGCCCAAGAAT  180
V  93.4% (228/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A......T.......C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_4344   181  CAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  ...................G...........................G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_4344   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_148663

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TCTAGATGGCCCCAAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTAGATGGCCCCAATTACTACTACGGGATGCACGTC	ARDLDGPNYYYGMHV	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  I  V  S  G  G  S  L  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_4345   4    CCCTGAGACTCTCCTGCATTGTCTCTGGTGGCTCCCTCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTGGAAT  93
V  90.6% (221/244)  IGHV4-59*01  50   .....TCC...A......C................A..............................................A.....G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  F  S  G  N  T  N  Y  N  P  S  L  K  G  R  V  N  I  S  G  D  T  S  Q  N  
                    Query_4345   94   GGATTGGCTATATTCATTTCAGTGGAAACACCAACTACAACCCCTCCCTCAAGGGTCGGGTCAACATATCAGGAGACACGTCCCAGAACC  183
V  90.6% (221/244)  IGHV4-59*01  140  .......G.....CT...A......G.G.........................A....A....C........T..........A......  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  D  G  P  N  Y  Y  Y  
                    Query_4345   184  AGTTCTCCCTGAAGGTGAACTCTGTTACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGATCTAGATGGCCCCAATTACTACTACG  273
V  90.6% (221/244)  IGHV4-59*01  230  ..............C...G......G..........................C...........--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  90.6% (48/53)    IGHJ6*02     9    --------------------------------------------------------------------------------..........  18

                                      ---------->                                
                                      G  M  H  V  W  G  P  G  T  A  V  I  V  S  S
                    Query_4345   274  GGATGCACGTCTGGGGCCCAGGGACCGCGGTCATCGTCTCCTC  316
J  90.6% (48/53)    IGHJ6*02     19   .T...G............A.......A......C.........  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_148668

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           327     9e-92
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGCCGAAATC	GTATTACGACTTTTGGA	ATCCTTATTCTCGGCTCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCGAAATCGTATTACGACTTTTGGAATCCTTATTCTCGGCTCCTTCGACCCC	ARGGRNRITTFGILILGSFDP	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  F  S  D  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_4346   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGTCCTTCAGTGATCATTATTGGAGCTGGATCCGCCAGTCTCCAGGGAAGGGGCTGGAA  90
V  92.7% (227/245)  IGHV4-34*01  49   .........................A.................G.T.C..C..................C.C.................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_4346   91   TGGATTGGGGAGATCAACCATAGTGGAAGCACCAACTACAACCCGTCTCTCAAGAGTCGAGTCACCATATCAGCGGACACGTCTAAGAAC  180
V  92.7% (227/245)  IGHV4-34*01  139  ...........A.....T.............................C.........................TA........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  K  L  I  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  G  R  N  R  I  T  T  F 
                    Query_4346   181  CAGTTCTCCCTGAAGCTGATCTCTGTGACCGCCGCAGACACGGCTGTATATTTCTGTGCGAGAGGGGGCCGAAATCGTATTACGACTTTT  270
V  92.7% (227/245)  IGHV4-34*01  229  ...................G...............G...........G....A............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  94.1% (16/17)    IGHD3-3*01   1    ----------------------------------------------------------------------------.........T....  14

                                      MGT-------------------------->                                  
                                       G  I  L  I  L  G  S  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_4346   271  GGAATCCTTATTCTCGGCTCCTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  334
D  94.1% (16/17)    IGHD3-3*01   15   ...-------------------------------------------------------------  17
J  97.7% (42/43)    IGHJ5*02     9    ---------------------.........................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_148669

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            358     4e-101
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	239	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	24	0	0	100
FR3-IMGT	125	238	114	113	1	0	99.1
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	233	231	2	0	99.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 
                    Query_4347   14   TGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATA  103
V  99.1% (231/233)  IGHV3-7*01   64   ..........................T...............................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_4347   104  AAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTG  193
V  99.1% (231/233)  IGHV3-7*01   154  .................................................T........................................  243
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-----------------------CDR3-IMGT------------
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  I  D  Y  Y  Y  Y 
                    Query_4347   194  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTAC  283
V  99.1% (231/233)  IGHV3-7*01   244  .....................................................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------..........---------------  26
J  96.6% (57/59)    IGHJ6*02     4    ----------------------------------------------------------------------------.......C..C...  17

                                      ----------->                                 
                                       G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4347   284  GGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  328
J  96.6% (57/59)    IGHJ6*02     18   .............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_295248

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD5-18*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGCCATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGCCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	240	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_4348   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAAAGACTGGAG  90
V  98.8% (240/243)  IGHV4-59*01  49   .........................................T......................................GG........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_4348   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (240/243)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D 
                    Query_4348   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGCCATGGTTACGGAGGAGTTGAC  270
V  98.8% (240/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD5-18*01  6    ---------------------------------------------------------------......T........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4348   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_74246

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            344     6e-97
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ6*02                                                                                              102     4e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	230	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	23	1	0	95.8
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	24	0	0	100
FR3-IMGT	116	229	114	113	1	0	99.1
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	222	2	0	99.1


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  K  Q  D 
                    Query_4349   14   TCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGAT  103
V  99.1% (222/224)  IGHV3-7*01   73   .................T........................................................................  162
                                       S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  K  Q  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 
                    Query_4349   104  GGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAAC  193
V  99.1% (222/224)  IGHV3-7*01   163  ........................................T.................................................  252
                                       G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><-----------------------CDR3-IMGT---------------------
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  I  D  Y  Y  Y  Y  G  M  D 
                    Query_4349   194  AGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGAC  283
V  99.1% (222/224)  IGHV3-7*01   253  ............................................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  100.0% (10/10)   IGHD3-22*01  17   --------------------------------------------------------..........------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    -------------------------------------------------------------------.......C..C............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4349   284  GTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  319
J  96.6% (57/59)    IGHJ6*02     27   ....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_74245

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           353     9e-100
IGHD3-10*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAA	ATGGTTCGGG	ACTGGTGGGATAGTGAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAAATGGTTCGGGACTGGTGGGATAGTGAATTTGACTAC	AKDKMVRDWWDSEFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  I  W  V  R  Q  A  P  G  K  G  L  
                    Query_4350   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTTAGCAACTATGCCATGATCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-23*01  47   ............................T................G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  S  A  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4350   91   AGTGGGTCTCAGGTATTAGTGGTAGTGGTGGGAGCGCATATTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  95.2% (238/250)  IGHV3-23*01  137  ............C..................T...A....C............................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  A  D  T  A  V  Y  Y  C  A  K  D  K  M  V  R  D  W  
                    Query_4350   181  AAAACACGCTGTATCTGCAAATGAATAGCCTGAGAGCCGCGGACACGGCCGTCTATTACTGTGCGAAAGATAAAATGGTTCGGGACTGGT  270
V  95.2% (238/250)  IGHV3-23*01  227  .G.......................C.............A............A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-10*01  9    --------------------------------------------------------------------------..........------  18

                                      T------------------>                                  
                                      W  D  S  E  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4350   271  GGGATAGTGAATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (43/43)   IGHJ4*02     6    -----------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_194293

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           336     1e-94
IGHD1-7*01                                                                                            12.2    31   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	TCGGGGTGGGG	GGAACT	CGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGATCGGGGTGGGGGGAACTCGGGGACTACTTTGACTAC	ARSGWGELGDYFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	245	230	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  R  L  
                    Query_4351   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGAGGCTGG  90
V  93.9% (230/245)  IGHV3-53*01  47   ...................................................................................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  S  I  F  S  N  G  N  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_4351   91   AGTGGGTCTCAAGCATTTTTAGTAATGGTAACACATACTACACAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.9% (230/245)  IGHV3-53*01  137  ...........GTT....A...CGG.....G..........G................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  V  Y  L  Q  V  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  G  W  G  E  L  G  D  
                    Query_4351   181  ACACGGTGTATCTTCAGGTGCACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCAAGATCGGGGTGGGGGGAACTCGGGGACT  270
V  93.9% (230/245)  IGHV3-53*01  227  .....C..........AA..A........................................G...-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (6/6)     IGHD1-7*01   10   ----------------------------------------------------------------------------......--------  15
J  95.8% (46/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  F  D  Y  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_4351   271  ACTTTGACTACTGGGGCCAGGGATCCCTGGTCATCGTCTCCTCAG  315
J  95.8% (46/48)    IGHJ4*02     4    .......................A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_194294

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           366     2e-103
IGHD1-26*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGCCCTTTTA	TGGGGGCTACT	TGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGCCCTTTTATGGGGGCTACTTGGATTGACCAC	ARCPFMGATWIDH	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4352   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (241/248)  IGHV3-33*01  47   ................................................A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  Y  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4352   91   AGTGGGTGGCAATTATATACTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  97.2% (241/248)  IGHV3-33*01  137  ...........G......GG.................................................................T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  I  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  C  P  F  M  G  A  T  
                    Query_4352   181  AGAACACGCTGTATCTGCAAATGATCAACCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGATGCCCTTTTATGGGGGCTACTT  270
V  97.2% (241/248)  IGHV3-33*01  227  ........................A..G........................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD1-26*01  8    ------------------------------------------------------------------------------....A......-  18

                                      ---------->                                  
                                      W  I  D  H  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4352   271  GGATTGACCACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  315
J  95.2% (40/42)    IGHJ4*02     7    ---.....T.........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_74242

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           378     3e-107
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ6*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGCA	N/A	GTACTACTATGGTTC	TT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCAGTACTACTATGGTTCTTTGGACCTC	ARQYYYGSLDL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	64	5	0	92.8
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  L  K  K  P  G  D  S  L  K  I  S  C  R  G  F  G  Y  S  F  T  S  Y 
                    Query_4353   2    CAGCTGGTGCAGTCTGGAGCAGAGCTGAAAAAGCCCGGGGACTCTCTGAAGATCTCTTGTAGGGGTTTTGGATACAGCTTTACCAGCTAC  91
V  91.7% (266/290)  IGHV5-51*01  7    ........................G................G..............C....A.....C......................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  L  I  F  P  N  D  F  D  A  R  Y  S  P 
                    Query_4353   92   TGGATCGGCTGGGTGCGCCAGATGCCCGGTAAAGGCTTGGAGTGGATGGGCCTCATCTTTCCTAATGACTTCGATGCCAGATACAGTCCG  181
V  91.7% (266/290)  IGHV5-51*01  97   .............................G......C.............GA......A....GG.....CT...A..........C...  186
                                       W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  F  Q  G  Q  V  T  L  S  V  D  K  S  T  S  T  A  Y  L  E  W  S  S  L  K  A  S  D  T  A 
                    Query_4353   182  TCCTTCCAAGGCCAGGTCACCCTCTCAGTCGACAAGTCCACCAGTACCGCCTACCTGGAGTGGAGTAGCCTGAAGGCCTCGGACACCGCC  271
V  91.7% (266/290)  IGHV5-51*01  187  .....................A......C...........T...C............C.......C........................  276
                                       S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                 
                                       I  Y  Y  C  A  R  Q  Y  Y  Y  G  S  L  D  L  W  G  Q  G  T  T  V  T  F  S  S 
                    Query_4353   272  ATTTATTACTGTGCGAGGCAGTACTACTATGGTTCTTTGGACCTCTGGGGCCAAGGGACCACGGTCACCTTCTCCTCA  349
V  91.7% (266/290)  IGHV5-51*01  277  ..G..............A..----------------------------------------------------------  296
                                       M  Y  Y  C  A  R                                                             
D  93.3% (14/15)    IGHD3-10*01  1    --------------------...T...........-------------------------------------------  15
J  95.1% (39/41)    IGHJ6*02     22   -------------------------------------.....G..........................G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_194296

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           300     8e-84
IGHD3-3*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTCAA	GGAGTTCC	AGTAGTTATTAT	GTCGGGTTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGGAGTTCCAGTAGTTATTATGTCGGGTTGGACTACTTTGAAAAC	SRSSSSYYVGLDYFEN	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	24	18	3	3	75
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	243	4	3	1	0	75
Total	N/A	N/A	246	221	22	3	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  S  F  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4354   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCGATGACTATAGTTTCCACTGGGTCCGTCAAGCTCCGGGGAAGGGTCTGG  90
V  89.8% (221/246)  IGHV3-43*01  47   .....................................C..T.....T....CCA.G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  G  W  D  G     T  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4354   91   AGTGGGTCTCTTTCATTGGTTGGGATGGG---ACCACAGACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCG  177
V  89.8% (221/246)  IGHV3-43*01  137  ...........C.T...A..........TGGT.G....T..................................................A  226
                                      E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      D  N  S  L  F  L  Q  M  T  G  L  R  I  E  D  T  A  L  Y  Y  C  S  R  S  S  S  S  Y  Y  V  
                    Query_4354   178  ACAACTCCCTCTTTCTGCAAATGACTGGTCTGAGAATTGAGGACACCGCCTTGTATTACTGTTCAAGGAGTTCCAGTAGTTATTATGTCG  267
V  89.8% (221/246)  IGHV3-43*01  227  .A........G.A...........ACA.........C.........................G...------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A                          
D  91.7% (11/12)    IGHD3-3*01   17   --------------------------------------------------------------------------...G........----  28

                                      T------------------>                                  
                                      G  L  D  Y  F  E  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4354   268  GGTTGGACTACTTTGAAAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  95.8% (46/48)    IGHJ4*02     1    ------..........CT....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_194297

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           353     1e-99
IGHD6-13*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCCCCCCCCCGCCCTGGGTGT	GTATTGCAGCAGCTGGT	CCCTCCCTCCGTTG	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGTACAGATCCCCCCCCCGCCCTGGGTGTGTATTGCAGCAGCTGGTCCCTCCCTCCGTTGTTTGCCTCC	STDPPPALGVYCSSWSLPPLFAS	249	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	110	4	0	96.5
CDR3-IMGT (germline)	249	256	8	6	2	0	75
Total	N/A	N/A	256	241	15	0	94.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  A  W  M  R  W  V  R  Q  A  P  G  K  G  L  
                    Query_4355   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACTTTCAGAAACGCCTGGATGAGGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.1% (241/256)  IGHV3-15*01  47   .......T.......................A...........T..............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  Q  S  K  G  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_4355   91   AGTGGGTTGGCCGTATTCAAAGTAAAGGTGACGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  94.1% (241/256)  IGHV3-15*01  137  .................A....C...AC...T..........................................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  N  I  L  H  L  Q  M  N  S  L  K  T  E  D  P  A  V  Y  Y  C  S  T  D  P  P  P  A  
                    Query_4355   181  ATTCAAAAAACATTCTGCATCTGCAAATGAACAGCCTGAAAACCGAGGACCCAGCCGTGTATTACTGTAGTACAGATCCCCCCCCCGCCC  270
V  94.1% (241/256)  IGHV3-15*01  227  ............CG...T................................A..................CC.....--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 

                                      --------CDR3-IMGT----------------------------->                                  
                                      L  G  V  Y  C  S  S  W  S  L  P  P  L  F  A  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4355   271  TGGGTGTGTATTGCAGCAGCTGGTCCCTCCCTCCGTTGTTTGCCTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  351
D  94.1% (16/17)    IGHD6-13*01  3    -------....A............---------------------------------------------------------  19
J  95.3% (41/43)    IGHJ4*02     6    --------------------------------------....A..A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_74248

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           310     1e-86
IGHD5-12*01                                                                                           12.2    30   
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCC	GTGGAT	TAAGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCGTGGATTAAGCTTC	ATRGLSF	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  D  M  N  W  L  R  Q  A  P  G  K  G  P  
                    Query_4356   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACTTTCAGTAATTACGACATGAACTGGCTCCGCCAGGCTCCTGGGAAGGGGCCGG  90
V  90.2% (222/246)  IGHV3-48*03  47   .....................C...............C.......G...T..A.........G.............A..........T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  D  I  T  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_4356   91   AGTGGGTCTCATCCATTAGTAGTCGTGGAGATATCACATACTACGCGGACTCAGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.2% (222/246)  IGHV3-48*03  137  .......T....A..........A....TAG..C..T.........A.....T...A.................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  S  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  T  R  G  L  S  F  W  G  
                    Query_4356   181  AGAACTCACTGTCCCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTCTTTATTACTGTGCGACCCGTGGATTAAGCTTCTGGGGCC  270
V  90.2% (222/246)  IGHV3-48*03  227  ............AT......................C...G.........G...............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD5-12*01  1    ---------------------------------------------------------------------......---------------  6
J  94.3% (33/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  A  Q  V  T  V  S  S  
                    Query_4356   271  AGGGAGCCCAGGTCACCGTCTCCTCAG  297
J  94.3% (33/35)    IGHJ4*02     22   .....A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_38276

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     3e-93
IGHD6-13*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATGGG	AGCAGCAGCTG	ATAAGGA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATGGGAGCAGCAGCTGATAAGGAAC	AREWEQQLIRN	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4357   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTGACTATAGCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   .....................................C......AG............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  S  G  S  R  Y  F  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  A  
                    Query_4357   91   AGTGGGTCTCGGGCATTAGTAGCGGTAGTCGCTACTTTTACTACGCAGACTCAGTGAAGGGCCGATTCTCCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ..........ATC.........TA.....A.T...A.A..............................A.....................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  E  W  E  Q  Q  L  I  
                    Query_4357   181  AGAACTCATTGTATTTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTGTATATTACTGTGCGAGAGAATGGGAGCAGCAGCTGATAA  270
V  92.4% (231/250)  IGHV3-21*01  227  ........C.....C.....................C...G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  7    ---------------------------------------------------------------------------...........----  17

                                      ---->                                  
                                      R  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4357   271  GGAACTGGGGCCAGGGAACCCTGGTCACCGTGTCCTCAG  309
J  97.2% (35/36)    IGHJ4*02     13   ---............................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_278279

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           427     9e-122
IGHD1-26*01                                                                                           21.8    0.044 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGG	GTGGGAGCTAC	GAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGTGGGAGCTACGAAACTTTGACTAC	ARGGWELRNFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_4358   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  97.2% (281/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  M  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  A  G  D  S  D  T  R  Y  S  P
                    Query_4358   91   CTGGATCGGCTGGATGCGCCAGATGCCCGGGAAAGGCCTCGAGTGGATGGGGATCATCTATGCGGGTGACTCTGATACCAGATACAGCCC  180
V  97.2% (281/289)  IGHV5-51*03  96   .............G.........................G.....................C.T..........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  F  L  Q  W  S  S  L  K  A  S  D  S  A
                    Query_4358   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACTCCGC  270
V  97.2% (281/289)  IGHV5-51*03  186  ............................................G........A...............................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  G  G  W  E  L  R  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4358   271  CATGTATTACTGTGCGAGAGGGGGGTGGGAGCTACGAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  97.2% (281/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (11/11)   IGHD1-26*01  7    ------------------------...........------------------------------------------------  17
J  100.0% (45/45)   IGHJ4*02     4    --------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_278278

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         296     2e-82
IGHD3-3*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	GAGTCGTAATTAT	CATGGGAATTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGAGTCGTAATTATCATGGGAATTTCTACTTCGACCAC	ARESRNYHGNFYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	43	8	0	84.3
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	220	31	0	87.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  D  S  V  Y  Y  S  L  N  W  I  R  Q  T  P  L  K  G 
                    Query_4359     1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCATCGACAGTGTTTACTACTCCTTAAACTGGATCCGGCAGACACCACTGAAGGGC  90
V  87.6% (220/251)  IGHV4-30-2*01  49   .......................C...............AG.....G.GGT.......GG.G.............C.....GG.......  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  D  Y  I  Q  H  S  G  A  T  Y  Y  N  P  S  L  E  S  R  V  S  L  S  V  D  R  S 
                    Query_4359     91   CTGGAGTGGATTGACTACATCCAGCATTCTGGGGCCACCTACTACAACCCGTCCCTCGAGAGTCGGGTCTCCCTTTCAGTAGACCGGTCC  180
V  87.6% (220/251)  IGHV4-30-2*01  139  .............GG......T.T...AG....AG......................A.......A...A..A.A.........A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  S  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  R  N  Y  H  G 
                    Query_4359     181  AAGAGCCAGTTCTCCCTGAGGCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGAGAGAGTCGTAATTATCATGGG  270
V  87.6% (220/251)  IGHV4-30-2*01  229  ....A..............A.....G...........................G.................-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  84.6% (11/13)    IGHD3-3*01     16   -----------------------------------------------------------------------....G..T.....------  28

                                        ----------------->                                  
                                         N  F  Y  F  D  H  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_4359     271  AATTTCTACTTCGACCACTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTCAG  322
J  91.5% (43/47)    IGHJ4*02       2    -----......T...T...............C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_38271

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            378     3e-107
IGHD2-8*01                                                                                            25.7    0.003 
IGHJ3*02                                                                                              56.4    4e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD2-8*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAC	CGGCTTTCCACCACGTC	TTGTAGTCATGGTGTATGC	AACACTACGGACTCTGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACCGGCTTTCCACCACGTCTTGTAGTCATGGTGTATGCAACACTACGGACTCTGGTTTTGATATT	AHRLSTTSCSHGVCNTTDSGFDI	263	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	27	3	0	90
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	106	8	0	93
CDR3-IMGT (germline)	263	268	6	6	0	0	100
Total	N/A	N/A	268	255	13	0	95.1


Alignments

                                     <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  S  S  G  V  S  V  G  W  I  R
                    Query_4360  1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGTAGTAGTGGAGTGAGTGTGGGCTGGATCCG  90
V  95.1% (255/268)  IGHV2-5*01  30   ............................................................C.C..........G................  119
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                     -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                       Q  P  P  G  K  A  L  E  W  L  A  L  V  Y  W  Y  D  D  K  R  Y  S  P  S  L  K  S  R  L  T
                    Query_4360  91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCGTTTATTGGTATGATGATAAGCGCTACAGTCCATCTCTGAAGAGCAGGCTCAC  180
V  95.1% (255/268)  IGHV2-5*01  120  .....................................A........A...................C.......................  209
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                     ---------------------FR3-IMGT----------------------------------------------------><-------
                                       I  T  K  D  T  S  R  N  Q  V  V  L  K  M  T  S  M  D  P  V  D  T  A  T  Y  Y  C  A  H  R
                    Query_4360  181  CATCACCAAGGACACTTCCAGAAATCAGGTGGTCCTTAAAATGACCAGCATGGACCCAGTGGACACAGCCACTTATTACTGTGCACACCG  270
V  95.1% (255/268)  IGHV2-5*01  210  ...............C....A...C.............C........A.........T..............A...............--  297
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                     ----------------------CDR3-IMGT----------------------------->                             
                                       L  S  T  T  S  C  S  H  G  V  C  N  T  T  D  S  G  F  D  I  W  G  Q  G  A  A  V  T  V  S
                    Query_4360  271  GCTTTCCACCACGTCTTGTAGTCATGGTGTATGCAACACTACGGACTCTGGTTTTGATATTTGGGGCCAAGGGGCAGCAGTCACCGTCTC  360
D  89.5% (17/19)    IGHD2-8*01  7    ---------------.....C.A...........--------------------------------------------------------  25
J  88.6% (39/44)    IGHJ3*02    7    ---------------------------------------------------.........C............A..ATG...........  45

                                          
                                       S  
                    Query_4360  361  TTCAG  365
J  88.6% (39/44)    IGHJ3*02    46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_278275

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           427     1e-121
IGHD2-2*01                                                                                            21.8    0.047 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAGTAGTGAA	TACCAGCTGCT	GTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCC	ARSSSEYQLLFWFDP	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	73	1	0	98.6
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	283	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_4361   3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCA  92
V  96.6% (283/293)  IGHV5-51*03  2    .....................................................................G............C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  
                    Query_4361   93   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATATATCCTGGTGACTCTGATGCCAGATATA  182
V  96.6% (283/293)  IGHV5-51*03  92   .............................................................C..................A.......C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  K  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_4361   183  GTCCGTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTCAAGGCCTCGGACA  272
V  96.6% (283/293)  IGHV5-51*03  182  .C.........C.....................C..........................................G.............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  Y  C  A  R  S  S  S  E  Y  Q  L  L  F  W  F  D  P  W  G  Q  G  T  L  V  T  V  
                    Query_4361   273  CCGCCATGTATTATTGTGCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCA  362
V  96.6% (283/293)  IGHV5-51*03  272  .............C.........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (11/11)   IGHD2-2*01   16   -----------------------------------...........--------------------------------------------  26
J  97.9% (46/47)    IGHJ5*02     5    -------------------------------------------------........................................T  45

                                            
                                      T  S  
                    Query_4361   363  CCTCAG  368
J  97.9% (46/47)    IGHJ5*02     46   ......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_278277

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           316     2e-88
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGCCGAAACC	GTATTACGACTTTTGGA	ATCCTTATTCTCGGCTCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCGAAACCGTATTACGACTTTTGGAATCCTTATTCTCGGCTCCTTCGACCCC	ARGGRNRITTFGILILGSFDP	240	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  D  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_4362   4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGGTCCTTCAGTGATCATTATTGGAGCTGGATCCGCCAGTCTCCAGGGAAGGGGCTGGAAT  93
V  91.4% (223/244)  IGHV4-34*01  50   .....TCC...A..............................G.T.C..C..................C.C.................G.  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N  
                    Query_4362   94   GGATTGGGGAGATCAACCATAGTGGAAGCACCAACTACAACCCGTCTCTCAAGAGTCGAGTCACCATATCAGCGGACACGTCTAAGAACC  183
V  91.4% (223/244)  IGHV4-34*01  140  ..........A.....T.............................C.........................TA........C.......  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------------CDR3-IM
                                      Q  F  S  L  K  L  I  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  G  R  N  R  I  T  T  F  
                    Query_4362   184  AGTTCTCCCTGAAGCTGATCTCTGTGACCGCCGCAGACACGGCTGTATATTTCTGTGCGAGAGGGGGCCGAAACCGTATTACGACTTTTG  273
V  91.4% (223/244)  IGHV4-34*01  230  ..................G...............G...........G....A............--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  94.1% (16/17)    IGHD3-3*01   1    ---------------------------------------------------------------------------.........T.....  15

                                      GT-------------------------->                                  
                                      G  I  L  I  L  G  S  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_4362   274  GAATCCTTATTCTCGGCTCCTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  336
D  94.1% (16/17)    IGHD3-3*01   16   ..-------------------------------------------------------------  17
J  97.7% (42/43)    IGHJ5*02     9    --------------------.........................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_278276

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           305     3e-85
IGHD3-16*02                                                                                           16.1    2.2  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTCCGAAACCTTCCGGACCAC	CGTTATAC	TC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTCCGAAACCTTCCGGACCACCGTTATACTCTGGACGTC	ARGLRNLPDHRYTLDV	237	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	46	5	0	90.2
CDR2-IMGT	99	122	24	18	6	0	75
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	231	213	18	0	92.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  D  F  Y  V  T  W  I  R  Q  A  P  G  K  G  L  E  W  V  A  Y  I  
                    Query_4363   13   GTGCAGCCTCCGGATTCACCTTCAGTGACTTCTACGTGACCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCGCATATATTA  102
V  92.2% (213/231)  IGHV3-11*01  65   ..........T...................A....A...G.......................................TT....C....  154
                                         A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  L  T  G  T  T  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  K  N  S  L  Y  L  
                    Query_4363   103  GTTTAACTGGTACTACCAAATACTACGCAGACTCTGTGAAGGGGCGATTCACCATCTCCAGGGACAACACCAAGAATTCACTGTATCTGC  192
V  92.2% (213/231)  IGHV3-11*01  155  ..AGT.G.....G.....T........................C........................G.......C.............  244
                                      S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  N  S  L  T  V  E  D  T  A  V  Y  Y  C  A  R  G  L  R  N  L  P  D  H  R  Y  T  L  D  
                    Query_4363   193  AAATGAACAGCCTGACAGTCGAGGACACGGCCGTGTATTACTGTGCGAGAGGTCTCCGAAACCTTCCGGACCACCGTTATACTCTGGACG  282
V  92.2% (213/231)  IGHV3-11*01  245  ...............G..C................................---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (8/8)     IGHD3-16*02  29   --------------------------------------------------------------------------........--------  36
J  97.6% (40/41)    IGHJ6*02     22   ------------------------------------------------------------------------------------......  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4363   283  TCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  317
J  97.6% (40/41)    IGHJ6*02     28   ...............................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_278271

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  S  N  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_4364   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATCAGCAATTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G.........T.G................A............................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_4364   91   TGGATTGAGTACATCTATTACAGGGGGAGTCCCAATAACGACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G...T...........T.....CA....CT..A..................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G 
                    Query_4364   181  CAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGT  270
V  92.2% (225/244)  IGHV4-59*08  229  .............A.C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_4364   271  TATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  334
J  94.2% (49/52)    IGHJ1*01     1    ------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_278270

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*03                                                                                           322     2e-90
IGHD4-4*01                                                                                            18.0    0.56 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*03	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	ACTTA	TGACTACAG	GGGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTTATGACTACAGGGGGGGTTTTGACTAC	ATYDYRGGFDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	223	17	0	92.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  H  Y  Y  W  S  W  I  R  Q  T  P  G  E  G  L  E 
                    Query_4365   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTCATTACTACTGGAGCTGGATCCGGCAGACCCCAGGGGAGGGACTGGAG  90
V  92.9% (223/240)  IGHV4-59*03  49   .......................................A..AG.........................C........A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  H  N  G  Y  T  T  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_4365   91   TGGATTGGCTATATCTATCACAACGGGTACACCACCTACAACCCCTCCCTCGAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAGAAG  180
V  92.9% (223/240)  IGHV4-59*03  139  ........G.........T...GT...AG.....A................A................A....................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  Y  D  Y  R  G  G  F  D  Y 
                    Query_4365   181  CAATTCTCCCTGAAGTTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGACTTATGACTACAGGGGGGGTTTTGACTAC  270
V  92.9% (223/240)  IGHV4-59*03  229  ...............C....C.......................................------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD4-4*01   1    -----------------------------------------------------------------.........----------------  9
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------------------------------------------------------.........  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4365   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (43/43)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_38278

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	247	223	21	3	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4366   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  87
V  90.3% (223/247)  IGHV4-4*02   49   ..................GC.........T...TCC......A..AG........GG.......................G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  K 
                    Query_4366   88   GAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCAAG  177
V  90.3% (223/247)  IGHV4-4*02   139  .......................T......A................................G.......A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G  W 
                    Query_4366   178  AATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGTGGGTAGCAGTGGCTGG  267
V  90.3% (223/247)  IGHV4-4*02   229  ..CC.GT..........G....GC..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-19*01  6    -----------------------------------------------------------------------------.............  18

                                      -------->                                
                                       L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_4366   268  CTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  308
J  95.0% (38/40)    IGHJ4*02     7    -......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_38279

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           318     5e-89
IGHD3-22*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	AATTCC	GATGGTAGTGGCTAT	CCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAAATTCCGATGGTAGTGGCTATCCCCTTGACTGC	ARNSDGSGYPLDC	237	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	105	9	0	92.1
CDR3-IMGT (germline)	237	242	6	5	1	0	83.3
Total	N/A	N/A	231	217	14	0	93.9


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  A  W  V  A  V  I 
                    Query_4367   12   TGTGCAGCGTCTGGATTTACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGCGTGGGTGGCAGTTATA  101
V  93.9% (217/231)  IGHV3-33*01  64   .................C..........G............................................A................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       W  N  D  G  S  N  K  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  I  L  Y  L 
                    Query_4367   102  TGGAATGATGGAAGTAATAAATACTATGCAGAGTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACATTCTGTATCTG  191
V  93.9% (217/231)  IGHV3-33*01  154  ...T............................C..............................................CG.........  243
                                       W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------CDR3-IMGT-------------->      
                                       Q  M  N  R  L  G  A  E  D  T  A  I  Y  Y  C  A  R  N  S  D  G  S  G  Y  P  L  D  C  W  G 
                    Query_4367   192  CAAATGAATCGACTGGGAGCCGAGGACACGGCTATTTATTACTGTGCGCGAAATTCCGATGGTAGTGGCTATCCCCTTGACTGCTGGGGC  281
V  93.9% (217/231)  IGHV3-33*01  244  ........CA.C...A.................G.G............A..---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  86.7% (13/15)    IGHD3-22*01  11   ---------------------------------------------------------...A.......T...------------------  25
J  95.2% (40/42)    IGHJ4*02     7    ----------------------------------------------------------------------------......A.......  20

                                                                  
                                       Q  G  I  L  V  T  V  S  S  
                    Query_4367   282  CAGGGAATCCTGGTCACCGTCTCCTCAG  309
J  95.2% (40/42)    IGHJ4*02     21   .......C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_196670

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-10*01                                                                                           10.3    118  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACA	GGGGA	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACAGGGGATACTACGGTATGGACGTC	ARDDRGYYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_4368   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTATTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   .....................................................C.A.....G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  H  Y  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S 
                    Query_4368   91   CTGGAGTGGATTGGGAACATCCATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ...............T.....T...................C.................G........T.....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  E  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  D  D  R  G  Y  Y  G 
                    Query_4368   181  AAGAACCAGTTCTCCCTGGAGCTGACCTCTATGACAGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGATGACAGGGGATACTACGGT  270
V  94.4% (237/251)  IGHV4-31*03  229  ..................A......G....G....T.................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------------.....---------  20
J  96.0% (48/50)    IGHJ6*02     12   ---------------------------------------------------------------------------------.........  20

                                      -------->                                
                                       M  D  V  W  G  Q  G  I  T  V  T  V  S  S
                    Query_4368   271  ATGGACGTCTGGGGCCAAGGGATTACGGTCACCGTCTCCTC  311
J  96.0% (48/50)    IGHJ6*02     21   ......................CC.................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_196671

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           408     4e-116
IGHD2-2*01                                                                                            19.9    0.17  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGGGA	AGTACCAGCT	CCTCAACCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGGAAGTACCAGCTCCTCAACCCTGACTAC	ARGGKYQLLNPDY	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	73	2	0	97.3
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	278	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N 
                    Query_4369   2    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACGTTCAAC  91
V  94.2% (278/295)  IGHV1-69*01  1    ...G...................G...........................................................C....G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  T  V  F  G  T  T  N  Y 
                    Query_4369   92   AACTATGCTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCATCATCACTGTCTTTGGAACAACAAACTAC  181
V  94.2% (278/295)  IGHV1-69*01  91   .G............C............................................G......C..A.......T...G........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  A  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_4369   182  GCACAGAAGTTCCAGGGCAGAGTCACCATTACCGCGGACGAATCGACGAGGACAGCCTACATGGAGCTGAGTAGCCTAAGATCTGAGGAC  271
V  94.2% (278/295)  IGHV1-69*01  181  ..........................G.................C.....C....................C.....G............  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  Y  C  A  R  G  G  K  Y  Q  L  L  N  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_4369   272  ACGGCCGTTTATTACTGTGCGAGAGGCGGGAAGTACCAGCTCCTCAACCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  361
V  94.2% (278/295)  IGHV1-69*01  271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (10/10)   IGHD2-2*01   14   -------------------------------..........-------------------------------------------------  23
J  100.0% (41/41)   IGHJ4*02     8    --------------------------------------------------........................................  47

                                       
                                       
                    Query_4369   362  G  362
J  100.0% (41/41)   IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_145320

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           375     3e-106
IGHD3-22*01                                                                                           19.9    0.18  
IGHJ3*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TACGCGAC	GATAGAAGTGGTT	T	TGATA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTACGCGACGATAGAAGTGGTTTTGATACTTTTGATATG	AKVRDDRSGFDTFDM	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	69	5	0	93.2
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	106	8	0	93
CDR3-IMGT (germline)	290	296	7	6	1	0	85.7
Total	N/A	N/A	294	267	27	0	90.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  A  K  V  S  C  K  A  S  G  Y  S  F  S  
                    Query_4370   3    AGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGCGAAGGTCTCCTGCAAGGCATCTGGATACAGTTTCAGCA  92
V  90.8% (267/294)  IGHV1-46*01  2    ....G........G........G............................T......T......................CC....C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  H  Y  I  H  W  V  R  Q  A  P  G  Q  G  F  E  W  M  G  M  F  N  P  G  A  G  S  A  I  S  
                    Query_4370   93   GTCACTATATACACTGGGTGCGACAGGCCCCTGGACAGGGGTTTGAGTGGATGGGAATGTTCAACCCTGGTGCTGGTAGCGCAATCTCCG  182
V  90.8% (267/294)  IGHV1-46*01  92   .CT.......G..........................A...C................AA........A...G.......A...G..A..  181
                                      S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  N  F  Q  A  R  L  T  M  T  G  D  T  S  T  R  T  V  Y  M  E  L  S  S  L  R  S  D  D  
                    Query_4370   183  CACAGAACTTCCAGGCCAGACTCACCATGACCGGGGACACGTCCACGAGGACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGACGACA  272
V  90.8% (267/294)  IGHV1-46*01  182  .......G.......G....G...........A................C...................................G....  271
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  V  Y  Y  C  A  K  V  R  D  D  R  S  G  F  D  T  F  D  M  W  G  Q  G  T  L  V  T  V  
                    Query_4370   273  CGGCCGTGTATTACTGTGCGAAAGTACGCGACGATAGAAGTGGTTTTGATACTTTTGATATGTGGGGCCAAGGGACGTTGGTCACCGTCT  362
V  90.8% (267/294)  IGHV1-46*01  272  .....................G..------------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                    
D  92.3% (12/13)    IGHD3-22*01  11   --------------------------------.....T.......---------------------------------------------  23
J  92.0% (46/50)    IGHJ3*02     1    ----------------------------------------------....G..........C..............AA............  44

                                            
                                      S  S  
                    Query_4370   363  CTTCAG  368
J  92.0% (46/50)    IGHJ3*02     45   ......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_196673

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           382     3e-108
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTA	ACGATTT	ACATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACGATTTACATTATGGTATGGACGTC	ARVNDLHYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4371   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATTCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (247/250)  IGHV4-31*01  49   ...................C................................................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 
                    Query_4371   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (247/250)  IGHV4-31*01  139  ..........................................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  D  L  H  Y  G 
                    Query_4371   181  AAGAACCAGCTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTTAACGATTTACATTATGGT  270
V  98.8% (247/250)  IGHV4-31*01  229  .........T............................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   6    -------------------------------------------------------------------------.......----------  12
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4371   271  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  312
J  100.0% (45/45)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_196674

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q 
                    Query_4372   1    ACCCTGTCCCTCACCTGCACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAA  90
V  91.0% (223/245)  IGHV4-59*01  49   ....................T..........................C........C............C.................G.G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_4372   91   TGGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAAC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A....G.....C...T....T....G......C..............C...........C.C.........A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E 
                    Query_4372   181  CAGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAG  270
V  91.0% (223/245)  IGHV4-59*01  229  ...T.........AG..G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  1    -----------------------------------------------------------------------------............-  12

                                      -------------->                                  
                                       D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4372   271  GATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  319
J  92.5% (37/40)    IGHJ4*02     9    ---------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_145327

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           297     7e-83
IGHD3-10*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              48.8    7e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTTTCAGG	TACTATGGTTCGG	CGGATTCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTTCAGGTACTATGGTTCGGCGGATTCT	ARAFRYYGSADS	235	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	120	21	17	1	3	81
FR3-IMGT	121	234	114	102	12	0	89.5
CDR3-IMGT (germline)	235	241	7	7	0	0	100
Total	N/A	N/A	244	219	22	3	89.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  D  S  Y  F  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4373   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCAGTGATTCGTACTTCAGCTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  89.8% (219/244)  IGHV4-59*01  49   ...................C...........G..........AG..AC....GG.......................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y     S  G  S  S  S  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  I  S  K  N 
                    Query_4373   91   TGGATTGGGTATATCTAT---AGTGGGAGCTCCAGCTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCTGACATATCCAAGAAC  177
V  89.8% (219/244)  IGHV4-59*01  139  ..................TAC.........A...A......................................TA....CG.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  T  Y  Y  C  A  R  A  F  R  Y  Y  G  S  A  D 
                    Query_4373   178  CACTTCTCCCTGAGGTTGACCTCTGTGACCGCTGCGGACACGGCCACATATTACTGTGCGAGAGCTTTCAGGTACTATGGTTCGGCGGAT  267
V  89.8% (219/244)  IGHV4-59*01  229  ..G..........A.C...G.........................GTG................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD3-10*01  5    ------------------------------------------------------------------------.............-----  17

                                      -->                                  
                                       S  W  G  Q  G  A  L  V  P  V  S  S  
                    Query_4373   268  TCTTGGGGCCAGGGAGCCCTCGTCCCCGTCTCCTCAG  304
J  91.2% (31/34)    IGHJ4*02     15   ---............A....G...A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_145324

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD3-16*01                                                                                           10.3    114   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGAAAGA	GGGGG	CTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC	ARDQKEGAPDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	239	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  K 
                    Query_4374   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGAAG  90
V  97.6% (239/245)  IGHV4-59*01  49   .............................T.............G...........................................G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_4374   91   TGGATTGGGTATATCTTTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.6% (239/245)  IGHV4-59*01  139  ................A.........................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  K  E  G  A  P  D  Y 
                    Query_4374   181  CAATTCTCCCTGAAACTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC  270
V  97.6% (239/245)  IGHV4-59*01  229  ..G...........G..................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   --------------------------------------------------------------------------.....-----------  22
J  97.6% (40/41)    IGHJ4*02     8    -----------------------------------------------------------------------------------.......  14

                                                                        
                                       W  G  Q  G  T  L  V  P  V  S  S  
                    Query_4374   271  TGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  304
J  97.6% (40/41)    IGHJ4*02     15   .....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_145325

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           338     5e-95
IGHD2-21*02                                                                                           12.2    32   
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGCGGG	GACTGC	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCGGGGACTGCCTACTACTACGGCATGGACGTC	ARGAGTAYYYGMDV	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  N  S  G  G  Y  F  W  S  W  I  R  Q  T  P  G  K  G 
                    Query_4375   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAACAGTGGTGGTTACTTCTGGAGCTGGATCCGGCAGACCCCAGGGAAGGGA  90
V  93.2% (233/250)  IGHV4-61*08  49   ..................A.................G...G..............A...................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  M  Y  Y  S  G  S  T  D  Y  P  P  S  L  R  S  R  V  S  I  S  V  D  T  S 
                    Query_4375   91   CTGGAGTGGATTGGCTATATGTATTACAGTGGGAGCACCGATTACCCCCCCTCCCTCAGGAGTCGAGTCAGCATATCAGTCGACACGTCC  180
V  93.2% (233/250)  IGHV4-61*08  139  ..............G.....C..................A.C...AA...........A...........C.........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  T  A  Y  Y 
                    Query_4375   181  AAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGGCGGGGACTGCCTACTAC  270
V  93.2% (233/250)  IGHV4-61*08  229  ....................G.....C...........T...............................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-21*02  17   -----------------------------------------------------------------------------......-------  22
J  98.2% (54/55)    IGHJ6*02     8    -----------------------------------------------------------------------------------.......  14

                                      -------------->                                 
                                       Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4375   271  TACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  98.2% (54/55)    IGHJ6*02     15   .....T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_270060

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD3-16*02                                                                                           18.0    0.69  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*02	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGAATGATAAA	GGGAGCTATCTTTAT	TACTTT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGAATGATAAAGGGAGCTATCTTTATTACTTTTACGGTATGGACGTC	RDMGMIKGAIFITFTVWTS	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	75	72	2	1	96
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	296	283	12	1	95.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S   E  Q  R  *  K  S  P  G  S  L  *  R  S  P  V  R  V  L  D  T  T  L  T
                    Query_4376   3    GAGGTCCAGCTGGTACAGTC-GGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAACTTTAAC  91
V  95.6% (283/296)  IGHV5-51*01  1    .....G........G.....T.............................................................G.....C.  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                        P  T  G  S  A  G  C  A  R  C  P  G  K  A  W  N  G  W  G  S  S  I  L  V  T  L  I  P  D  T
                    Query_4376   92   ACCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAATGGCTGGGGATCATCTATCCTGGTGACTCTGATACCAGATAC  181
V  95.6% (283/296)  IGHV5-51*01  91   .G.............................................G...A......................................  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                        A  R  P  S  R  A  R  S  P  S  Q  P  T  C  P  P  A  P  P  T  C  T  G  A  A  *  R  P  R  T
                    Query_4376   182  AGCCCGTCCTTCCAGGGCCAGGTCACCATCTCAGCCGACATGTCCACCAGCACCGCCTACCTGCACTGGAGCAGCCTGAAGGCCTCGGAC  271
V  95.6% (283/296)  IGHV5-51*01  181  ..............A.........................A.....T..................G........................  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                        P  P  C  I  T  V  R  D  M  G  M  I  K  G  A  I  F  I  T  F  T  V  W  T  S  G  A  K  G  P
                    Query_4376   272  ACCGCCGTGTATTACTGTGCGAGACATGGGAATGATAAAGGGAGCTATCTTTATTACTTTTACGGTATGGACGTCTGGGGCCAAGGGACC  361
V  95.6% (283/296)  IGHV5-51*01  271  ......A...................----------------------------------------------------------------  296
                                       T  A  M  Y  Y  C  A  R                                                                   
D  86.7% (13/15)    IGHD3-16*02  20   ---------------------------------------.....T....G....------------------------------------  34
J  97.9% (47/48)    IGHJ6*02     15   ------------------------------------------------------------..............................  44

                                                        
                                        R  S  P  S  R   
                    Query_4376   362  ACGGTCACCGTCTCGTCA  379
J  97.9% (47/48)    IGHJ6*02     45   ..............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_196679

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTATTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  N  H  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4377   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTAATCACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (222/245)  IGHV4-59*01  49   .......................................AG..G.T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  S  H  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  T  A  D  K  S  K  N 
                    Query_4377   91   TGGATTGCCTATATCTCTCACAGTGGGGGCACCAATTACAACCGCTCCCTCAAGAGTCGAGTCACCATAACAGCGGACAAGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  .......GG.......A.T........A.......C.......C.........................T...TA....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_4377   181  CAGTTTTCCCTGAAGGTGAGATCTGTGACCGCCGCGGACACGGCCGTATATTATTGTGCCAGAGAGGCCTACTCTTATTACGGTATGGAC  270
V  90.6% (222/245)  IGHV4-59*01  229  .....C.........C....C...........T..............G.....C.....G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  91.4% (53/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC..C............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_4377   271  GTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  306
J  91.4% (53/58)    IGHJ6*02     27   ...........A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_145328

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           257     1e-70
IGHD3-3*02                                                                                            14.1    8.7  
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACATTTG	GCAGTTTTGG	CCGACTTCATTCAAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACATTTGGCAGTTTTGGCCGACTTCATTCAACCTACTTCTACGGCATGGACGTC	ARTFGSFGRLHSTYFYGMDV	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	125	24	13	8	3	54.2
FR3-IMGT	126	239	114	97	17	0	85.1
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	248	208	37	3	83.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  N  N  Y  E  M  S  W  V  R  Q  T  P  G  R  G  L  
                    Query_4378   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCGGGATTCATCTTCAATAATTATGAGATGAGTTGGGTCCGCCAGACTCCAGGGAGGGGACTGG  90
V  83.9% (208/248)  IGHV3-48*03  47   ............................T.......C.....G..G......A....AC............G.........A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  S  I  S  G  R  G  H     S  S  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  D  
                    Query_4378   91   AGTGGCTTTCATCCATCAGCGGTCGTGGTCA---CAGTTCGTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGACA  177
V  83.9% (208/248)  IGHV3-48*03  137  .....G......A...T..TA..A.....AGTAC..TA.AC................A.............................C..  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  G  A  L  Y  L  H  M  N  S  L  R  P  D  D  T  A  V  Y  Y  C  A  R  T  F  G  S  F  G  R  
                    Query_4378   178  AGGGTGCACTTTATCTGCACATGAATAGCCTGAGACCCGACGACACGGCTGTCTACTATTGCGCGAGAACATTTGGCAGTTTTGGCCGAC  267
V  83.9% (208/248)  IGHV3-48*03  227  ..AACT....G........A.....C.........G....G...........T..T..C..T......----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-3*02   7    ---------------------------------------------------------------------------...T......-----  16

                                      R3-IMGT------------------------>                                 
                                      L  H  S  T  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4378   268  TTCATTCAACCTACTTCTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  96.4% (53/55)    IGHJ6*02     8    ----------.....A......T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_145329

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           375     3e-106
IGHD6-13*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCTCGCCCCAGAA	AGCAGCAGCT	ATAACTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCTCGCCCCAGAAAGCAGCAGCTATAACTTACTACTTTGACTAC	ARVSPQKAAAITYYFDY	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	242	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  H  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4379   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACCACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.2% (242/244)  IGHV4-59*01  49   ................................................T.........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_4379   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  99.2% (242/244)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  P  Q  K  A  A  A  I 
                    Query_4379   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTCTCGCCCCAGAAAGCAGCAGCTATA  270
V  99.2% (242/244)  IGHV4-59*01  229  ....................C...........................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  7    -----------------------------------------------------------------------------..........---  16

                                      ----------------->                                  
                                       T  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4379   271  ACTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  100.0% (48/48)   IGHJ4*02     1    ----................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_270064

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           329     3e-92
IGHD2-15*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGC	ATTGTAATGGT	AACAGGTGTTGGGG	CGTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGCATTGTAATGGTAACAGGTGTTGGGGCGTC	ARDRHCNGNRCWGV	235	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	49	2	0	96.1
CDR2-IMGT	100	120	21	20	1	0	95.2
FR3-IMGT	121	234	114	109	5	0	95.6
CDR3-IMGT (germline)	235	242	8	8	0	0	100
Total	N/A	N/A	230	220	10	0	95.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  V  S  N  N  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  L  I 
                    Query_4380   13   TGTGCAGCCTCTGGGTTCACCGTCAGTAACAACTCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCACTTATT  102
V  95.7% (220/230)  IGHV3-53*01  64   ............................G.....A.....G...........................................G.....  153
                                       C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I 

                                      ---CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-----------
                                       Y  S  G  G  T  T  H  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  N  T  L  Y  L  Q 
                    Query_4380   103  TATAGCGGTGGTACCACACACTCCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGAACACGCTGTATCTTCAA  192
V  95.7% (220/230)  IGHV3-53*01  154  .............G....T...A...............................................A...................  243
                                       Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 

                                      -----------------------------------------><----------------CDR3-IMGT--------------->      
                                       M  N  S  R  R  G  E  D  T  A  V  Y  Y  C  A  R  D  R  H  C  N  G  N  R  C  W  G  V  G  G 
                    Query_4380   193  ATGAACAGCCGGAGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGATAGGCATTGTAATGGTAACAGGTGTTGGGGCGTCGGGGGC  282
V  95.7% (220/230)  IGHV3-53*01  244  ..........T.....C.................................----------------------------------------  293
                                       M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                           
D  90.9% (10/11)    IGHD2-15*01  6    -------------------------------------------------------......G....------------------------  16
J  94.6% (35/37)    IGHJ6*02     26   --------------------------------------------------------------------------------....T.....  35

                                                                 
                                       Q  G  T  T  V  S  V  S  S 
                    Query_4380   283  CAAGGGACCACGGTCTCCGTCTCCTCA  309
J  94.6% (35/37)    IGHJ6*02     36   ...............A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_270065

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           388     5e-110
IGHD6-6*01                                                                                            21.8    0.045 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCC	ATAGCAGCTCG	GATGGGGA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCATAGCAGCTCGGATGGGGAACTTTGACTCC	AAIAARMGNFDS	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	267	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  V  S  R  Y
                    Query_4381   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCCGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCGTCAGTAGGTA  90
V  93.4% (267/286)  IGHV1-69*01  6    ..................G.................T..........................................T....C..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        L  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  L  L  R  T  A  N  Y  A  Q
                    Query_4381   91   TCTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGATCATCCCTCTTTTAAGGACAGCAAACTACGCACA  180
V  93.4% (267/286)  IGHV1-69*01  96   .GC.................................G...........................A.C..TG.T.................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  H  E  S  T  S  T  V  Y  M  E  V  N  S  L  G  S  Q  D  T  A
                    Query_4381   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGCACGAATCCACGAGCACAGTCTACATGGAGGTGAACAGCCTGGGATCTCAGGACACGGC  270
V  93.4% (267/286)  IGHV1-69*01  186  ...............................G..................C..........C...G.......A.....G..........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  A  A  I  A  A  R  M  G  N  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4381   271  CGTGTATTACTGTGCGGCCATAGCAGCTCGGATGGGGAACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  351
V  93.4% (267/286)  IGHV1-69*01  276  ................-----------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                  
D  100.0% (11/11)   IGHD6-6*01   5    -------------------...........---------------------------------------------------  15
J  97.7% (42/43)    IGHJ4*02     4    --------------------------------------.........A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_270067

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  R  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_4382   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACCGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   ...............................G........G.AG..A....T.................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_4382   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.2% (226/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_4382   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.2% (226/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_4382   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_124301

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           339     2e-95
IGHD6-13*01                                                                                           21.8    0.041
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  L  S  G  G  S  I  S  G  G  G  F  Y  W  N  W  I  R  Q  H  P  G  K  G  
                    Query_4383   4    CCCTGAGACTCTCCTGTACTCTCTCTGGTGGCTCCATCAGCGGTGGTGGTTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  93.6% (233/249)  IGHV4-31*02  50   .....TCC...A........G....................A.........A........G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  H  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  
                    Query_4383   94   TGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCTA  183
V  93.6% (233/249)  IGHV4-31*02  140  ....................T..................A.................................A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V  
                    Query_4383   184  AGAACCAATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTAG  273
V  93.6% (233/249)  IGHV4-31*02  230  .......G..........A.....GC...............................A...........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  11   -----------------------------------------------------------------------...........--------  21

                                      ---------------->                                  
                                      G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4383   274  GCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
J  98.0% (48/49)    IGHJ3*01     2    --.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_124300

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGCCCTACTTATTATGCCAA	TAGTGGTT	CAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCCCTACTTATTATGCCAATAGTGGTTCAGACTTTGACTAC	ARGGPTYYANSGSDFDY	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  Y  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4384   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGCAGCTACTACATGAGCTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  93.9% (231/246)  IGHV3-53*01  47   ...........................................T...A.........................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  H  S  A  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_4384   91   AGTGGGTCTCAGTTATTCATAGCGCAGGAAGTACATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.9% (231/246)  IGHV3-53*01  137  .................T......GT..T..C.....C..C.................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------------CDR3-IMGT-
                                      N  T  L  N  L  Q  M  N  S  L  R  V  Q  D  T  A  V  Y  Y  C  A  R  G  G  P  T  Y  Y  A  N  
                    Query_4384   181  ACACGCTAAATCTTCAAATGAACAGCCTGAGAGTCCAGGACACGGCCGTGTATTATTGTGCGAGAGGAGGCCCTACTTATTATGCCAATA  270
V  93.9% (231/246)  IGHV3-53*01  227  .......GT........................C.G...................C..........------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-22*01  16   ----------------------------------------------------------------------------------------..  17

                                      ------------------->                                  
                                      S  G  S  D  F  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_4384   271  GTGGTTCAGACTTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  324
D  100.0% (8/8)     IGHD3-22*01  18   ......------------------------------------------------  23
J  97.8% (44/45)    IGHJ4*02     4    ---------................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_124303

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           339     2e-95
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CATGCTTTCCTCGACTGATATGT	CGTTCGGGGGA	TTTTTGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACATGCTTTCCTCGACTGATATGTCGTTCGGGGGATTTTTGATTGACCAG	ARDMLSSTDMSFGGFLIDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	234	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  S  S  R  S  Y  Y  W  G  W  T  R  Q  S  P  G  K  G 
                    Query_4385   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGACTCCATCAGCAGTAGAAGTTACTACTGGGGCTGGACCCGCCAGTCCCCAGGGAAGGGG  90
V  93.2% (234/251)  IGHV4-39*02  49   ...................C...........G...............T...................T.......C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  E  S  R  V  A  I  S  I  D  T  S 
                    Query_4385   91   CTGGAATGGATTGGGAATATCTATTATAGTGGGAGCACCGACTACAACCCGTCCCTCGAGAGTCGAGTCGCCATATCGATAGACACGTCC  180
V  93.2% (234/251)  IGHV4-39*02  139  .....G..........G......................T.................A...........A.......CG...........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  M  L  S  S  T  D 
                    Query_4385   181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACCGCCGCAGACACGGCTATTTATTACTGTGCGAGAGACATGCTTTCCTCGACTGAT  270
V  93.2% (234/251)  IGHV4-39*02  229  ........C............C....C........................G.G.................-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       M  S  F  G  G  F  L  I  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4385   271  ATGTCGTTCGGGGGATTTTTGATTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  90.9% (10/11)    IGHD3-16*01  13   ----....T......-------------------------------------------------  23
J  95.2% (40/42)    IGHJ4*02     7    ----------------------.....T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_124302

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD1-26*01                                                                                           23.8    0.012 
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGTATGCCGTCC	TGGGAGCTACTA	GT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTATGCCGTCCTGGGAGCTACTAGTTGGTTCGACCCC	AKYAVLGATSWFDP	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	68	6	0	91.9
CDR1-IMGT	79	102	24	18	6	0	75
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	109	5	0	95.6
CDR3-IMGT (germline)	292	295	4	4	0	0	100
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  V  E  V  K  E  P  G  E  S  L  R  I  S  C  R  G  S  G  Y  T  F  I  
                    Query_4386   5    AGGTTCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAGAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGCTCTGGGTACACCTTTATTA  94
V  93.1% (271/291)  IGHV5-51*01  2    ....G...................C..........A..................A...........A...T.....A....G.....CC.  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  
                    Query_4386   95   GTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGAGACCAGATACA  184
V  93.1% (271/291)  IGHV5-51*01  92   .C..C.......G...........................................A......................T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  Q  G  H  V  T  L  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  S  L  K  A  S  D  
                    Query_4386   185  ACCCGTCCTTCCAAGGCCACGTCACCCTCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCACTGGAGCAGCCTGAAGGCCTCGGACA  274
V  93.1% (271/291)  IGHV5-51*01  182  G..................G......A.....................G...............G.........................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  A  K  Y  A  V  L  G  A  T  S  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  
                    Query_4386   275  CCGCCATGTATTACTGTGCGAAGTATGCCGTCCTGGGAGCTACTAGTTGGTTCGACCCCTGGGGCCAGGGAACCCTAGTCATCGTCTCCT  364
V  93.1% (271/291)  IGHV5-51*01  272  .....................---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (12/12)   IGHD1-26*01  8    ---------------------------------............---------------------------------------------  19
J  95.7% (44/46)    IGHJ5*02     6    -----------------------------------------------.............................G....C........  48

                                         
                                      S  
                    Query_4386   365  CAG  367
J  95.7% (44/46)    IGHJ5*02     49   ...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_124305

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           411     5e-117
IGHD2-21*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	ATTTTGGTGG	ATAGAGATAGAGTTCC	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTC	ARGGFWWIEIEFRMDV	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	74	1	0	98.7
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	106	8	0	93
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	279	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_4387   3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACC  92
V  94.6% (279/295)  IGHV1-18*01  1    .....T.............................................................................C......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  W  I  S  A  Y  T  G  N  T  K  N 
                    Query_4387   93   GACTATGGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGATGGATCAGCGCTTACACTGGTAATACAAAAAAT  182
V  94.6% (279/295)  IGHV1-18*01  91   AG...........G.....................................A.....................A......C.....CT..  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  V  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_4387   183  GCACAAAAAGTCCAGGGCAGAGTGACCATGACCACAGACACATCCACGAGAACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGAC  272
V  94.6% (279/295)  IGHV1-18*01  181  .....G..GC.............C..........................C...............C.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  G  G  F  W  W  I  E  I  E  F  R  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_4387   273  ACGGCCGTGTATTACTGTGCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTCTGGGGCCAAGGGACCACGGTCACC  362
V  94.6% (279/295)  IGHV1-18*01  271  .........................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  90.0% (9/10)     IGHD2-21*01  6    -----------------------------...G......---------------------------------------------------  15
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------------...................................  53

                                               
                                       V  S  S 
                    Query_4387   363  GTCTCCTCA  371
J  100.0% (44/44)   IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_124304

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           330     1e-92
IGHD6-6*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	TC	ATAGCAGTTCGT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACTCATAGCAGTTCGTACTACTATGAGTAC	TTHSSSYYYEY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	232	21	0	91.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  T  W  L  S  W  V  R  Q  D  P  E  K  G  L  
                    Query_4388   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACACCTGGCTGAGCTGGGTCCGCCAGGATCCAGAGAAGGGTCTGG  90
V  91.7% (232/253)  IGHV3-15*01  47   .......T.......................................G.....A..................C.....G......G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      A  W  V  G  R  I  K  S  E  T  H  G  G  T  T  D  Y  P  A  P  V  K  G  R  F  T  V  S  R  D  
                    Query_4388   91   CGTGGGTTGGCCGTATTAAAAGCGAGACTCATGGTGGGACAACAGACTACCCTGCACCCGTGAAAGGCAGATTCACCGTCTCTAGAGATG  180
V  91.7% (232/253)  IGHV3-15*01  137  A......................A.A...G....................G..........................A....A.......  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  D  T  L  Y  L  H  M  N  D  L  K  S  E  D  T  A  V  Y  F  C  T  T  H  S  S  S  Y  
                    Query_4388   181  ATTCAAAAGACACACTGTATCTGCACATGAACGACCTGAAAAGCGAGGACACAGCCGTGTATTTCTGCACCACTCATAGCAGTTCGTACT  270
V  91.7% (232/253)  IGHV3-15*01  227  ........A....G...........A......AG........C....................A...T.....-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  91.7% (11/12)    IGHD6-6*01   5    ---------------------------------------------------------------------------.......C....---  16
J  91.7% (44/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  Y  E  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_4388   271  ACTATGAGTACTGGGGTCAGGGAACCCGGGTCACCGTCTCCTCAG  315
J  91.7% (44/48)    IGHJ4*02     4    ...T...C........C..........T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_124307

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            329     3e-92
IGHD3-3*01                                                                                            37.2    1e-06
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGCGACGTCCGGGTCC	TACGATTTTTGGAGTGGTT	CTGGTACTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGCGACGTCCGGGTCCTACGATTTTTGGAGTGGTTCTGGTACTCTTGACTAC	AREATSGSYDFWSGSGTLDY	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  T  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4389  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTAGTGGTACCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  90
V  92.3% (229/248)  IGHV4-4*02  49   ..................G...................C..C...A...A..............................G.........  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  S  H  S  G  S  T  K  Y  N  T  S  L  R  S  R  V  T  I  S  V  D  R  S  N 
                    Query_4389  91   GAGTGGATTGGAGAAATCTCTCATAGTGGGAGCACCAAGTACAACACGTCCCTCAGGAGTCGAGTCACCATATCAGTAGACAGGTCGAAC  180
V  92.3% (229/248)  IGHV4-4*02  139  ...........G.......A..................C......C.........A..........................A...C..G  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><-------------------------CDR3
                                      K  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  T  S  G  S  Y  D 
                    Query_4389  181  AAGCAGTTCTCCCTGAGATTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGAGGCGACGTCCGGGTCCTACGAT  270
V  92.3% (229/248)  IGHV4-4*02  229  ..C.............AGC...G.............................................----------------------  296
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (19/19)   IGHD3-3*01  5    ------------------------------------------------------------------------------------......  10

                                     -IMGT------------------------>                                  
                                      F  W  S  G  S  G  T  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4389  271  TTTTGGAGTGGTTCTGGTACTCTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  334
D  100.0% (19/19)   IGHD3-3*01  11   .............---------------------------------------------------  23
J  97.6% (41/42)    IGHJ4*02    7    ----------------------.....................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_124306

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4390   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_4390   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_4390   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_4390   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_124309

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           346     2e-97
IGHD6-19*01                                                                                           23.8    0.011
IGHJ1*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AACAGGCA	TATGGCAGTGCCTGGTAC	GACTTC	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACAGGCATATGGCAGTGCCTGGTACGACTTCTACTTTCACCAC	AKQAYGSAWYDFYFHH	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	247	4	4	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  V  S  D  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4391   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCGTCAGCGATGGTTCTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  94.7% (234/247)  IGHV4-61*01  49   ...............................G..........AG....AG........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  T  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4391   91   CTGGAATGGATTGGGTATATCTATTACACTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  94.7% (234/247)  IGHV4-61*01  139  .....G......................G..........A..................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  P  K  L  R  S  L  T  A  A  D  T  A  V  Y  Y  C  A  K  Q  A  Y  G  S  A  W 
                    Query_4391   181  AAGAATCAGTTCTCCCCGAAACTGAGGTCTCTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAAACAGGCATATGGCAGTGCCTGG  270
V  94.7% (234/247)  IGHV4-61*01  229  .....C..........T...G.....C...G....................................-----------------------  295
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  88.9% (16/18)    IGHD6-19*01  4    ---------------------------------------------------------------------------...A......G....  18

                                      GT------------------>                                  
                                       Y  D  F  Y  F  H  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4391   271  TACGACTTCTACTTTCACCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  325
D  88.9% (16/18)    IGHD6-19*01  19   ...----------------------------------------------------  21
J  95.7% (44/46)    IGHJ1*01     7    ---------.....C..G.....................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_336054

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHD6-13*01                                                                                           14.1    8.6   
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGGC	GTATAGC	CCCGGGGGGGTGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAGGGGGCGTATAGCCCCGGGGGGGTGAACTACTACAGTATGGACGTC	AREGAYSPGGVNYYSMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  G  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4392   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTCAGTGGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-74*01  47   ......................................T.....A.............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  A  S  R  I  N  S  D  G  S  T  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4392   91   TGTGGGCCTCACGTATTAACAGTGATGGGAGTACAACAAGTTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-74*01  137  ......T............T.............GC.....C.................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  F  Y  C  A  R  E  G  A  Y  S  P  G  
                    Query_4392   181  AGAACACGCTGTATCTGCAAATGAATAGTCTGAGAGCCGAGGACACGGCAGTGTTTTACTGTGCAAGAGAGGGGGCGTATAGCCCCGGGG  270
V  96.0% (240/250)  IGHV3-74*01  227  .........................C.......................T....A...............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-13*01  3    ----------------------------------------------------------------------------.......-------  9

                                      IMGT--------------------->                                 
                                      G  V  N  Y  Y  S  M  D  V  W  G  Q  G  T  T  V  T  V  A  S 
                    Query_4392   271  GGGTGAACTACTACAGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCGCCTCA  329
J  96.2% (51/53)    IGHJ6*02     10   ------........G......................................T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_215038

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            339     1e-95
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GAATGAACCC	TGAGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATGAACCCTGAGTAC	ARGMNPEY	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  E  A  S  G  F  T  F  S  G  H  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4393  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAGTGGCCACTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-7*01  47   .....................C......................A..T.T.......G................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  K  D  G  S  E  E  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_4393  91   AGTGGGTGGCCAACATAAAGAAAGATGGAAGTGAAGAATACTATGCGGACTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCC  180
V  93.6% (233/249)  IGHV3-7*01  137  ....................C.............GA.........T..........A................................A  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                     H  K  S  L  Y  L  Q  M  Y  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  G  M  N  P  E  Y  W  
                    Query_4393  181  ACAAGTCACTGTATCTGCAAATGTACAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGAGAGGAATGAACCCTGAGTACTGGG  270
V  93.6% (233/249)  IGHV3-7*01  227  .G..C..................A..........................G.G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  97.6% (40/41)    IGHJ4*02    8    -------------------------------------------------------------------------------...C.......  18

                                                                   
                                     G  Q  G  T  L  V  T  V  S  S  
                    Query_4393  271  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  300
J  97.6% (40/41)    IGHJ4*02    19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_215039

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           360     1e-101
IGHD1-26*01                                                                                           21.8    0.044 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GA	GGTGTAGTGGGAGC	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTAC	ARGGVVGAPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	260	30	0	89.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  T  A  G  G  S  F  S  S  Y
                    Query_4394   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGACCGCTGGAGGTAGTTTCAGCAGCTA  90
V  89.7% (260/290)  IGHV1-69*06  6    ..................G...........................................A.G.TT.......C.CC...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  M  R  Q  A  P  G  Q  G  L  E  W  M  G  A  I  M  P  L  Y  G  I  G  N  Y  A  Q
                    Query_4394   91   TGCTATCAGTTGGATGCGACAGGCCCCTGGGCAAGGGCTTGAGTGGATGGGAGCAATCATGCCTCTATATGGCATAGGAAACTACGCACA  180
V  89.7% (260/290)  IGHV1-69*06  96   .........C...G................A......................GG.....C...A.C.T...T.C..C............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  K  V  T  I  T  A  D  T  S  T  R  T  A  Y  M  E  L  S  G  L  R  S  A  D  T  A
                    Query_4394   181  GAAGTTCCAGGGCAAAGTCACGATTACCGCGGACACATCCACGAGGACAGCCTACATGGAGTTGAGTGGCCTGAGATCTGCGGACACGGC  270
V  89.7% (260/290)  IGHV1-69*06  186  ..............G....................A.........C...............C....CA............A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  H  C  A  R  G  G  V  V  G  A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_4394   271  CATGTATCATTGTGCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTACTGGGGCCAGGGAACTCTGGTCACCGTCTCCCCAG  353
V  89.7% (260/290)  IGHV1-69*06  276  .G.....T.C..........---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  92.9% (13/14)    IGHD1-26*01  1    ----------------------...A..........-----------------------------------------------  14
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------------........................C...............T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_215036

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ2*01                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTTGGGCAGTATC	CTATGGTTCGGGGAGTTA	GGTTCGC	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACTTGGGCAGTATCCTATGGTTCGGGGAGTTAGGTTCGCGGTACTTCGATCTC	AKDLGSILWFGELGSRYFDL	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  Y  A  M  D  W  V  R  Q  P  P  G  K  G  L  
                    Query_4395   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACTATGCCATGGACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ..........................................G..G..........AG.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  R  G  D  N  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4395   91   AGTGGGTCTCAGCAATTAGTGGTCGTGGTGATAACACATTTTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  .............T.........A......G..G.....AC.................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  S  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  L  G  S  I  L  W  
                    Query_4395   181  AGAGTACGCTGTATCTGCAAATGGACAGCCTGAGAGCCGAAGACACGGCCGTATATTACTGTGCGAAAGACTTGGGCAGTATCCTATGGT  270
V  94.0% (235/250)  IGHV3-23*01  227  ...AC..................A................G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (18/18)   IGHD3-10*01  7    -----------------------------------------------------------------------------------.......  13

                                      R3-IMGT------------------------>                                  
                                      F  G  E  L  G  S  R  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4395   271  TCGGGGAGTTAGGTTCGCGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  336
D  100.0% (18/18)   IGHD3-10*01  14   ...........-------------------------------------------------------  24
J  100.0% (48/48)   IGHJ2*01     6    ------------------................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_215037

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           411     5e-117
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATGCGGGGCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATGCGGGGCCCTACTTTGCCTAC	ARRIAVANAGPYFAY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	276	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_4396   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.5% (276/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_4396   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.5% (276/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_4396   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.5% (276/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  F  C  A  R  R  I  A  V  A  N  A  G  P  Y  F  A  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4396   271  CGTCTATTTCTGTGCGAGACGAATAGCAGTGGCTAATGCGGGGCCCTACTTTGCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.5% (276/289)  IGHV5-51*03  276  .A.G....A..........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  97.9% (46/47)    IGHJ4*02     2    ---------------------------------------------........A....................................  46

                                        
                                        
                    Query_4396   361  AG  362
J  97.9% (46/47)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_215034

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           346     2e-97
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AC	ATTACGATTTTTCGAGTGGT	CTCATTATCGGAAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACATTACGATTTTTCGAGTGGTCTCATTATCGGAACTGACTAC	AREHYDFSSGLIIGTDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  R  G  S  Y  Y  W  S  W  N  R  Q  S  P  G  K  G 
                    Query_4397   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGAGGTTCTTACTACTGGAGTTGGAACCGGCAGTCCCCAGGGAAGGGA  90
V  94.0% (236/251)  IGHV4-61*01  49   .........................................C..T...AG............C....T.......C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  H  S  G  S  T  N  Y  H  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_4397   91   CTGGAGTGGATTGGGTATATTTATCACAGTGGGAGCACCAACTATCACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCC  180
V  94.0% (236/251)  IGHV4-61*01  139  ....................C...T...................CA................................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  H  Y  D  F  S  S 
                    Query_4397   181  AAGAACCAGTTCTCCCTGAAGCTGAATTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGAACATTACGATTTTTCGAGT  270
V  94.0% (236/251)  IGHV4-61*01  229  .........................GC..........................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-3*01   3    -------------------------------------------------------------------------............G....  19

                                      MGT-------------------->                                  
                                       G  L  I  I  G  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4397   271  GGTCTCATTATCGGAACTGACTACTGGGGCCAGGGTACCCTGGTCACCGTCTCCTCAG  328
D  95.0% (19/20)    IGHD3-3*01   20   ...-------------------------------------------------------  22
J  97.6% (40/41)    IGHJ4*02     8    -----------------..................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_215035

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           294     6e-82
IGHD6-13*01                                                                                           21.8    0.039
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	226	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	39	30	11	1	18	36.7
FR2-IMGT	40	90	51	50	1	0	98
CDR2-IMGT	91	111	21	20	1	0	95.2
FR3-IMGT	112	225	114	107	7	0	93.9
CDR3-IMGT (germline)	226	232	7	7	0	0	100
Total	N/A	N/A	250	221	11	18	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  L  S  G  G                    F  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_4398   1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGG------------------TTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  72
V  88.4% (221/250)  IGHV4-31*03  49   .....................G..........CTCCATCAGCAGTGGTGG..A........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_4398   73   CTGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCT  162
V  88.4% (221/250)  IGHV4-31*03  139  .....................T..................A.................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V 
                    Query_4398   163  AAGAACCAATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTA  252
V  88.4% (221/250)  IGHV4-31*03  229  ........G..........A.....GC...............................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD6-13*01  11   ------------------------------------------------------------------------...........-------  21

                                      ----------------->                                  
                                       G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4398   253  GGCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  304
J  98.0% (48/49)    IGHJ3*01     2    ---.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_215032

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGTC	GTATTATTTTGATAGTAGTGGT	CAGAGTCCCGCG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGTCGTATTATTTTGATAGTAGTGGTCAGAGTCCCGCGTACTTTGACTAC	ARDLSYYFDSSGQSPAYFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4399   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  C  I  S  G  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4399   91   AGTGGGTCTCATGCATCAGTGGTGGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  ............C...T...A..A..................................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  S  Y  Y  F  D  
                    Query_4399   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGTCGTATTATTTTGATA  270
V  98.4% (246/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (20/22)    IGHD3-22*01  1    ----------------------------------------------------------------------------......C.A.....  14

                                      R3-IMGT------------------------>                                  
                                      S  S  G  Q  S  P  A  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_4399   271  GTAGTGGTCAGAGTCCCGCGTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  336
D  90.9% (20/22)    IGHD3-22*01  15   ........----------------------------------------------------------  22
J  97.8% (45/46)    IGHJ4*02     3    --------------------........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_215030

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         391     6e-111
IGHD6-19*01                                                                                           18.0    0.65  
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTG	ATAGTACTGGCTGGT	TTCTGGTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGATAGTACTGGCTGGTTTCTGGTT	ARRDSTGWFLV	293	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	292	123	106	8	9	86.2
CDR3-IMGT (germline)	293	298	6	6	0	0	100
Total	N/A	N/A	298	276	13	9	92.6


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_4400     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTA  90
V  92.6% (276/298)  IGHV5-10-1*01  6    ......................................................................................G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  D  T  N  Y  S  P
                    Query_4400     91   CTGGATCAGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCCGACACCAACTACAGCCC  180
V  92.6% (276/298)  IGHV5-10-1*01  96   .........C..............................................................TT.T......--------  177
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N         

                                        ----------------------------------------------FR3-IMGT------------------------------------
                                          Y  S  P  S  L  Q  G  H  V  S  F  S  V  D  K  T  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S
                    Query_4400     181  GTACAGCCCGTCCCTCCAGGGCCACGTCAGCTTCTCAGTCGACAAGACCATCAGCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTC  270
V  92.6% (276/298)  IGHV5-10-1*01  178  -............T....A..........C.A......CT......T...........................................  266
                                          Y  S  P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S

                                        ---------------------><-----------CDR3-IMGT----------->                                  
                                          D  T  A  I  Y  Y  C  A  R  R  D  S  T  G  W  F  L  V  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_4400     271  GGACACCGCCATTTATTACTGTGCGAGACGTGATAGTACTGGCTGGTTTCTGGTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  359
V  92.6% (276/298)  IGHV5-10-1*01  267  ............G...............-------------------------------------------------------------  294
                                          D  T  A  M  Y  Y  C  A  R                                                              
D  86.7% (13/15)    IGHD6-19*01    5    --------------------------------....C.G........------------------------------------------  19
J  97.1% (33/34)    IGHJ4*02       15   -------------------------------------------------------..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_215031

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           330     1e-92
IGHD2-15*01                                                                                           14.1    8.7  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGAGCACTTCGCGATTAAGTATGA	TGCTACT	GGTCCCGATAGTTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGAGCACTTCGCGATTAAGTATGATGCTACTGGTCCCGATAGTTGCTTTGACTAC	ARGEHFAIKYDATGPDSCFDY	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  A  W  I  R  Q  P  P  G  M  G  L  E 
                    Query_4401   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGGCCTGGATCCGCCAGCCCCCTGGGATGGGACTGGAA  90
V  93.1% (228/245)  IGHV4-34*01  49   ......................................................AG..................A....A...G.....G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_4401   91   TGGATTGGCGAAATCAATCATAGTGGAAGCACCAATTACAACCCGTCCCTCAAGAGCCGAGTCACGATGTCAGTGGACACGTCCAAGAAT  180
V  93.1% (228/245)  IGHV4-34*01  139  ........G..........................C....................T........C..A.....A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  P  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  E  H  F  A  I  K  Y  D 
                    Query_4401   181  CAGTTCTCCCCGAGACTGAGCTCAGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCGAGCACTTCGCGATTAAGTATGAT  270
V  93.1% (228/245)  IGHV4-34*01  229  ..........T..AG........T.........................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD2-15*01  23   -----------------------------------------------------------------------------------------.  23

                                      MGT-------------------------->                                  
                                       A  T  G  P  D  S  C  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_4401   271  GCTACTGGTCCCGATAGTTGCTTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  334
D  100.0% (7/7)     IGHD2-15*01  24   ......----------------------------------------------------------  29
J  97.7% (43/44)    IGHJ4*02     5    --------------------...............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_298350

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD6-6*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTC	ATTREQLVPIFDF	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	269	18	0	93.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  L  S  S  Y
                    Query_4402   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATTTCCTGTAAGGGTTCTGGATACAGATTAAGCAGTTA  90
V  93.7% (269/287)  IGHV5-51*01  6    ......................................................C.......................C..T.C...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  E  T  K  Y  S  P
                    Query_4402   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCGTCTATCCTGGTGACTCTGAGACCAAATACAGCCC  180
V  93.7% (269/287)  IGHV5-51*01  96   C.......G..........................................G...A...................T....G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  A  S  G  T  A  F  L  Q  W  D  S  L  K  A  S  D  T  A
                    Query_4402   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGGCCAGCGGCACCGCCTTCCTGCAGTGGGACAGCCTGAAGGCCTCGGACACCGC  270
V  93.7% (269/287)  IGHV5-51*01  186  .......C.............................T...T.A.........A..........AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_4402   271  CATGTATTACTGTGCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  356
V  93.7% (269/287)  IGHV5-51*01  276  .................---------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------.......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_347218

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            338     5e-95
IGHD2-2*01                                                                                            16.1    2.2  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAGCGA	TGTACTACTACCAG	N/A	CTGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGAGCGATGTACTACTACCAGCTGCTTCCACCCC	ARDERCTTTSCFHP	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4403  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-7*03  47   ..............................................C..........G................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  R  D  G  T  D  K  Y  Y  V  D  S  V  K  G  R  F  T  T  S  R  D  N  A  
                    Query_4403  91   AGTGGGTGGCCAACATTAAGCGAGATGGCACTGACAAATACTACGTCGACTCTGTGAAGGGCCGATTCACCACCTCCCGGGACAACGCCA  180
V  93.2% (233/250)  IGHV3-7*03  137  ................A....A......A.G...G........T..G.........................T....A.A..........  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  E  R  C  T  T  T  
                    Query_4403  181  AGAATTCACTGTATCTTCAAATGAACAGCCTGCGAGTCGAGGACACGGCCGTCTATTACTGTGCGAGAGATGAGCGATGTACTACTACCA  270
V  93.2% (233/250)  IGHV3-7*03  227  ....C...........G...............A...C...............G.................--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  85.7% (12/14)    IGHD2-2*01  8    -----------------------------------------------------------------------------....G..G.....  20

                                     ------------->                                  
                                     S  C  F  H  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4403  271  GCTGCTTCCACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  85.7% (12/14)    IGHD2-2*01  21   .-----------------------------------------------  21
J  95.7% (45/47)    IGHJ5*02    5    -...G...G.......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_347219

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAA	TACGGTTTTTGGAGTGGTTA	ACCA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCAATACGGTTTTTGGAGTGGTTAACCATGACTAC	EQYGFWSG*P*L	239	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	103	52	51	0	1	98.1
CDR2-IMGT	104	124	21	18	3	0	85.7
FR3-IMGT	125	238	114	110	4	0	96.5
CDR3-IMGT (germline)	239	243	5	5	0	0	100
Total	N/A	N/A	243	233	9	1	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><---------------------FR2-IMGT---------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  Y  S  A  Y  Y  W  S  W  I  R  Q  P  P  R  E  G  A  G 
                    Query_4404   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTACAGTGCTTACTACTGGAGCTGGATCCGCCAGCCCCCCAGGGAAGGGGCTGGA  90
V  95.9% (233/243)  IGHV4-34*01  49   .....................................T.....G.............................-................  137
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P   P  G  K  G  L  E

                                      ------------><-----CDR2-IMGT-----><----------------------------------------------------FR3
                                       V  D  W  G  N  Q  S  L  W  K  N  Q  L  Q  P  V  P  R  E  S  S  H  H  I  S  R  H  D  Q  E 
                    Query_4404   91   GTGGATTGGGGAAATCAATCATTATGGAAGAACCAACTTCAACCCGTCCCTCGAGAGTCGAGTCACCATATTAGTAGACACGACCAAGAA  180
V  95.9% (233/243)  IGHV4-34*01  138  ......................AG......C.......A.............A..................C..........T.......  227
                                        W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N

                                      -IMGT----------------------------------------------------><--------------CDR3-IMGT--------
                                       P  V  L  P  E  A  E  L  C  D  R  R  G  H  G  C  V  L  L  C  E  Q  Y  G  F  W  S  G  *  P 
                    Query_4404   181  CCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGCAATACGGTTTTTGGAGTGGTTAACCA  270
V  95.9% (233/243)  IGHV4-34*01  228  ...............................................................---------------------------  290
                                        Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                              
D  95.0% (19/20)    IGHD3-3*01   5    ------------------------------------------------------------------....A...............----  24

                                      ------>                                  
                                       *  L  L  G  P  G  N  P  G  H  R  L  L   
                    Query_4404   271  TGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  311
J  100.0% (41/41)   IGHJ4*02     8    .........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_73149

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           372     2e-105
IGHD6-19*01                                                                                           12.2    34    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	GCTCCAG	GGCTGG	GATT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCCAGGGCTGGGATTCTTTGACTAT	AAPGLGFFDY	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	262	24	0	91.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  A  S  G  N  T  L  T  N  N
                    Query_4405   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCGTCAGTGAAAGTTGCCTGCAAGGCATCCGGAAACACCCTCACCAACAA  90
V  91.6% (262/286)  IGHV1-46*01  6    ..................G.......................C........G...T.............T...T.....T......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  N  K  T  T  Y  A  Q
                    Query_4405   91   CTTCATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTAATAAGACAACCTATGCACA  180
V  91.6% (262/286)  IGHV1-46*01  96   ..AT..................................................................GG..GC....G...C.....  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  L  T  M  T  R  V  T  S  T  R  T  V  Y  M  E  L  S  N  L  R  S  E  D  T  A
                    Query_4405   181  GAAGTTCCAGGGCAGACTGACCATGACTAGGGTCACGTCCACGAGAACAGTCTACATGGAGCTGAGCAACCTGAGATCTGAGGACACGGC  270
V  91.6% (262/286)  IGHV1-46*01  186  ................G.C........C....A............C......................G.....................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        V  Y  Y  C  A  A  P  G  L  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_4405   271  CGTGTATTACTGCGCGGCTCCAGGGCTGGGATTCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  347
V  91.6% (262/286)  IGHV1-46*01  276  ............T...-------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                              
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------......------------------------------------------------  18
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------.........C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_351204

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  H
                    Query_4406   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATCA  90
V  92.4% (268/290)  IGHV5-51*01  6    ....................C........A.....................G.........A......C.........C.......GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  P
                    Query_4406   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCCC  180
V  92.4% (268/290)  IGHV5-51*01  96   ...................................................G.......A.....G.......G....C.....C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  A
                    Query_4406   181  GTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCGC  270
V  92.4% (268/290)  IGHV5-51*01  186  ...............G........C...................................G.......G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_4406   271  CTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  350
V  92.4% (268/290)  IGHV5-51*01  276  .A.......C.....G....------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    -----------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_347212

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           344     6e-97
IGHD1-26*01                                                                                           18.0    0.56 
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGA	TGGGAGCTA	T	TTCAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATGATGGGAGCTATTTCAACCCC	VRDDGSYFNP	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_4407   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTACTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-74*01  47   .............................................G..........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  I  N  S  D  G  S  G  T  T  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  P  
                    Query_4407   91   AATGGGTCTCACGTATTAATAGTGATGGCAGTGGCACAACCTACGCGGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAACCCCA  180
V  94.0% (235/250)  IGHV3-74*01  137  TG..........................G...A......G.................A............................G...  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  H  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  V  R  D  D  G  S  Y  F  N  
                    Query_4407   181  AGAATACGCTGCATCTGCAAATGAACAGTCTGAGAGTCGAGGACACGGCTGTATATTTCTGTGTAAGAGATGATGGGAGCTATTTCAACC  270
V  94.0% (235/250)  IGHV3-74*01  227  ....C......T........................C...............G....A.....C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD1-26*01  8    -------------------------------------------------------------------------.........--------  16
J  97.7% (42/43)    IGHJ5*02     9    -----------------------------------------------------------------------------------...G...  15

                                      ->                                  
                                      P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4407   271  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.7% (42/43)    IGHJ5*02     16   ....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_73144

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           313     1e-87
IGHD2-15*01                                                                                           46.8    1e-09
IGHJ5*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGG	TATTGTAGTGGTGATAGCTGCTACTCC	GGGG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGTATTGTAGTGGTGATAGCTGCTACTCCGGGGACAACTGGTTCGACCCC	ARWYCSGDSCYSGDNWFDP	230	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	107	7	0	93.9
CDR3-IMGT (germline)	230	235	6	6	0	0	100
Total	N/A	N/A	222	211	11	0	95


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  S  F  S  I  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  S 
                    Query_4408   14   TCTGGATTCAGCTTCAGTATCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGT  103
V  95.0% (211/222)  IGHV3-21*01  73   ..........C........G......................................................................  162
                                       S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       S  S  H  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  Q  N  S  L  Y  L  Q  M  N 
                    Query_4408   104  AGTAGTCACAAATATTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCCAGAACTCTCTGTATCTGCAAATGAAT  193
V  95.0% (211/222)  IGHV3-21*01  163  ......T...T...C................................................A.......A.................C  252
                                       S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><-----------------------CDR3-IMGT---------------------
                                       S  L  R  V  E  D  T  A  I  Y  Y  C  A  R  W  Y  C  S  G  D  S  C  Y  S  G  D  N  W  F  D 
                    Query_4408   194  AGCCTGAGAGTCGAGGACACGGCTATTTATTACTGTGCGAGATGGTATTGTAGTGGTGATAGCTGCTACTCCGGGGACAACTGGTTCGAC  283
V  95.0% (211/222)  IGHV3-21*01  253  ..........C.............G.G...............------------------------------------------------  294
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  96.3% (26/27)    IGHD2-15*01  5    ---------------------------------------------.............G.............------------------  31
J  98.0% (50/51)    IGHJ5*02     1    ----------------------------------------------------------------------------..............  14

                                      -->                                  
                                       P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_4408   284  CCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  320
J  98.0% (50/51)    IGHJ5*02     15   .........................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_347210

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           389     2e-110
IGHD6-19*01                                                                                           16.1    2.6   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAGTACCAA	ATAGCAGT	CCAATACCCCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCCAGTACCAAATAGCAGTCCAATACCCCCCCTTTGACTTC	VRGQYQIAVQYPPFDF	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	68	3	0	95.8
CDR1-IMGT	78	101	24	17	7	0	70.8
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	297	7	6	1	0	85.7
Total	N/A	N/A	291	270	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  T  L  S  C  A  A  S  G  F  S  L  T  D  
                    Query_4409   7    TGCAGCTGGTGCAGTCTGGAGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGACACTCTCCTGTGCAGCCTCTGGATTCAGCTTGACTGACT  96
V  92.8% (270/291)  IGHV3-30*03  5    ...........G.......G...............................G..........................C...C.G.AG..  94
                                         Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  A  M  Y  W  V  R  Q  A  P  G  K  G  P  E  W  V  A  L  I  S  Y  H  G  S  N  K  F  Y  A  
                    Query_4409   97   ATGCAATGTACTGGGTCCGCCAGGCTCCAGGCAAGGGGCCGGAGTGGGTGGCCCTTATATCATATCATGGAAGTAATAAATTCTATGCAG  186
V  92.8% (270/291)  IGHV3-30*03  95   ...GC...C..............................T............AG...........G...............A........  184
                                      Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      D  S  V  K  G  R  F  T  I  S  R  D  I  S  K  S  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  
                    Query_4409   187  ACTCCGTGAAGGGCCGATTTACCATCTCCAGAGACATTTCCAAGAGCACGCTATATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGG  276
V  92.8% (270/291)  IGHV3-30*03  185  ...................C................A........A......G.....................................  274
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  

                                      -------------><-------------------CDR3-IMGT------------------>                            
                                      A  V  Y  Y  C  V  R  G  Q  Y  Q  I  A  V  Q  Y  P  P  F  D  F  W  G  Q  G  T  L  V  T  V  
                    Query_4409   277  CTGTGTATTACTGTGTGAGAGGCCAGTACCAAATAGCAGTCCAATACCCCCCCTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCT  366
V  92.8% (270/291)  IGHV3-30*03  275  ...............C.....---------------------------------------------------------------------  295
                                      A  V  Y  Y  C  A  R                                                                       
D  100.0% (8/8)     IGHD6-19*01  5    --------------------------------........--------------------------------------------------  12
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------------------........A.............................  42

                                            
                                      S  S  
                    Query_4409   367  CCTCAG  372
J  97.7% (43/44)    IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_347211

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATTTGCTGA	TTCGGGGA	TTGAAAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGCC	AKFADSGIETYGMDA	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	73	1	0	98.6
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	292	4	4	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  
                    Query_4410   2    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTATCA  91
V  95.9% (279/291)  IGHV5-51*01  2    ....G..................................................................................C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  F  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  C  L  G  I  I  D  P  R  D  S  D  T  T  Y  
                    Query_4410   92   GCTTCTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGCTTGGGGATCATCGATCCTCGTGACTCTGATACCACATACA  181
V  95.9% (279/291)  IGHV5-51*01  92   ...A........G....................................GA...........T.....G...............G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  T  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_4410   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  95.9% (279/291)  IGHV5-51*01  182  .................................C...........T............................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  Y  C  A  K  F  A  D  S  G  I  E  T  Y  G  M  D  A  W  G  Q  G  T  T  V  T  V  
                    Query_4410   272  CCGCCATGTATTATTGTGCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGCCTGGGGCCAAGGGACCACGGTCACCGTCT  361
V  95.9% (279/291)  IGHV5-51*01  272  .............C.......---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (8/8)     IGHD3-10*01  13   -------------------------------........---------------------------------------------------  20
J  97.8% (44/45)    IGHJ6*02     14   ----------------------------------------------..............T.............................  57

                                       
                                      S
                    Query_4410   362  C  362
J  97.8% (44/45)    IGHJ6*02     58   .  58


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_73141

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            358     4e-101
IGHD3-3*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGTAGTCAAG	ACGATTTTTGGAGTGGTT	TGTTCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTAGTCAAGACGATTTTTGGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTC	ERW*SRRFLEWFVPLLLWYGR	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	105	52	48	3	1	92.3
CDR2-IMGT	106	129	24	24	0	0	100
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	242	8	1	96.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><---------------------FR2-IMGT-------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  P  P  G  K  G  A  
                    Query_4411  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGGTATTGGATGAGTTGGGTCCGCCAACCTCCAGGGAAGGGGGCTG  90
V  96.4% (242/251)  IGHV3-7*03  47   ..............................................C...........C...........GG..............-...  135
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G   L 

                                     --------------><-------CDR2-IMGT------><--------------------------------------------------
                                     G  V  G  G  Q  H  K  A  R  W  K  *  E  I  L  C  G  L  C  G  G  P  I  H  H  L  Q  R  Q  R  
                    Query_4411  91   GAGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCC  180
V  96.4% (242/251)  IGHV3-7*03  136  .........................................................A................................  225
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A 

                                     --FR3-IMGT----------------------------------------------------><--------------------------
                                     Q  E  L  S  V  S  G  N  E  Q  P  E  S  R  G  H  G  R  I  L  L  C  E  R  W  *  S  R  R  F  
                    Query_4411  181  AAGAACTCAGTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAGAGATGGTAGTCAAGACGATTTT  270
V  96.4% (242/251)  IGHV3-7*03  226  .........C........C..................................G.................-------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (18/18)   IGHD3-3*01  6    ----------------------------------------------------------------------------------........  13

                                     --CDR3-IMGT--------------------------->                                 
                                     L  E  W  F  V  P  L  L  L  W  Y  G  R  L  G  P  R  D  H  G  H  R  L  L  
                    Query_4411  271  TGGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  342
D  100.0% (18/18)   IGHD3-3*01  14   ..........--------------------------------------------------------------  23
J  96.4% (54/56)    IGHJ6*02    7    ----------------.......C..C.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_73140

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ3*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCGTCCGGGT	TTACTATGATAGTAG	GGGG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCGTCCGGGTTTACTATGATAGTAGGGGGGATGCTTTTGATATC	AKVVRVYYDSRGDAFDI	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  P  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4412   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTATCCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-23*01  47   .............................................G....G......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  S  I  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4412   91   AGTGGGTCTCATCTATTAGTGGTAGTGGTGCCAGTATATCTTACGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (231/249)  IGHV3-23*01  137  ...........G..................GT..C.C..AC.......................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  I  L  Y  L  Q  M  A  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  V  V  R  V  Y  Y  D  
                    Query_4412   181  AGAATATACTGTATCTGCAAATGGCCAGCCTGAGAGCCGAAGACACGGCCCTATATTACTGTGCGAAAGTCGTCCGGGTTTACTATGATA  270
V  92.8% (231/249)  IGHV3-23*01  227  ....C.CG...............AA...............G.........G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD3-22*01  4    -------------------------------------------------------------------------------...........  14

                                      GT-------------------->                                  
                                      S  R  G  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4412   271  GTAGGGGGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  327
D  100.0% (15/15)   IGHD3-22*01  15   ....-----------------------------------------------------  18
J  100.0% (49/49)   IGHJ3*02     2    --------.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_347214

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           367     6e-104
IGHD3-3*01                                                                                            21.8    0.043 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGTATGAC	TTTTTGGAGTG	ATTTTCGAATGGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGTATGACTTTTTGGAGTGATTTTCGAATGGGC	AGMTFWSDFRMG	267	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	80	30	29	1	0	96.7
FR2-IMGT	81	131	51	47	4	0	92.2
CDR2-IMGT	132	152	21	19	2	0	90.5
FR3-IMGT	153	266	114	107	7	0	93.9
CDR3-IMGT (germline)	267	269	3	3	0	0	100
Total	N/A	N/A	269	252	17	0	93.7


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  I  C  S  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  
                    Query_4413   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCATCTGCTCTGTCTCTGGTGGCTCCATCAGCAGTAGCAGTTACTACTGGGGCTGGA  90
V  93.7% (252/269)  IGHV4-39*01  26   ................T...................C....A............................T...................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  I  I  Y  H  S  G  S  T  Y  Y  K  P  S  L  K  S  R  
                    Query_4413   91   TCCGCCAGCCCCCAGGGAAGGGACTGGAATGGATTGGAATTATTTATCATAGTGGGAGCACCTACTATAAGCCGTCCCTCAAGAGTCGAC  180
V  93.7% (252/269)  IGHV4-39*01  116  ......................G.....G........G.G...C...T...................C..C..................G  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      L  T  M  S  V  D  T  S  K  N  Q  F  S  L  R  L  S  S  V  T  A  T  D  T  A  V  Y  Y  C  A  
                    Query_4413   181  TCACCATGTCCGTGGACACGTCCAAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCACAGACACGGCTGTGTATTACTGTGCGG  270
V  93.7% (252/269)  IGHV4-39*01  206  .......A.....A............................A...................G..........................-  294
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------CDR3-IMGT------------>                                  
                                      G  M  T  F  W  S  D  F  R  M  G  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4413   271  GTATGACTTTTTGGAGTGATTTTCGAATGGGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD3-3*01   10   -------...........------------------------------------------------  20
J  100.0% (35/35)   IGHJ4*02     14   -------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_347215

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           360     1e-101
IGHD6-19*01                                                                                           14.1    8.1   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCCTCCTTA	GGCTGGT	CGGGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCTCCTTAGGCTGGTCGGGAATGACTAC	ATLLRLVGNDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	238	8	0	96.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  T  F  T  N  Y  T  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4414   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTAGATTCACCTTTACCAACTACACCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.7% (238/246)  IGHV3-23*01  47   .............................G............G..G...TG.......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4414   91   AGTGGGTCTCATCTATTACTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.7% (238/246)  IGHV3-23*01  137  ...........G......G.......................................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  T  L  L  R  L  V  G  N  
                    Query_4414   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGACCCTCCTTAGGCTGGTCGGGAATG  270
V  96.7% (238/246)  IGHV3-23*01  227  ..................................................G...............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD6-19*01  13   ---------------------------------------------------------------------------.......--------  19
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4414   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (41/41)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_53042

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           315     5e-88
IGHD6-13*01                                                                                           18.0    0.62 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTGGT	CAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTGGTCAGCAGCTGACTGACTAC	ARDSGQQLTDY	276	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	275	147	111	3	33	75.5
CDR3-IMGT (germline)	276	283	8	8	0	0	100
Total	N/A	N/A	283	244	6	33	86.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_4415   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  86.2% (244/283)  IGHV3-21*01  47   ..............................................C..................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  H  I  Y  Y  G  D  S  V  K  G  R  F  T  Y  Y  A  D  S  V  
                    Query_4415   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAGTCACATATATTATGGAGACTCAGTGAAGGGCCGATTCACCTATTACGCAGACTCAGTGA  180
V  86.2% (244/283)  IGHV3-21*01  137  ................................T.....---------------------------------..C................  193
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I                                   Y  Y  A  D  S  V  

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                      K  G  R  F  T  I  S  R  D  D  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  
                    Query_4415   181  AGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATT  270
V  86.2% (244/283)  IGHV3-21*01  194  ..........................A..........................................................G....  283
                                      K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-----------CDR3-IMGT----------->                                  
                                      Y  C  A  R  D  S  G  Q  Q  L  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4415   271  ACTGTGCGAGAGATTCTGGTCAGCAGCTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
V  86.2% (244/283)  IGHV3-21*01  284  .............-----------------------------------------------------------  296
                                      Y  C  A  R                                                              
D  100.0% (9/9)     IGHD6-13*01  9    --------------------.........-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_53040

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           307     1e-85
IGHD3-10*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	AGACCAAGG	GGTTCGGGGACTTA	CTGCAGCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGACCAAGGGGTTCGGGGACTTACTGCAGCCCTTTGACCAC	VKTKGFGDLLQPFDH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	221	25	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  T  S  G  F  T  L  T  S  S  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4416   1    GGTCCCTGAGACTCTCCTGTGAAACCTCTGGATTCACCTTGACTAGTTCCACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.8% (221/246)  IGHV3-21*01  47   .....................C.G................C.G...C.AT.G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  T  S  G  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_4416   91   AGTGGGTCGCATCTATTACTAGTGGAAGTACTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  89.8% (221/246)  IGHV3-21*01  137  ........T....C....G....A.T....G........................................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  L  S  G  L  R  V  E  D  T  A  V  Y  S  C  V  K  T  K  G  F  G  D  L  
                    Query_4416   181  AGAACTCACTGTTTCTGCAACTGAGTGGCCTGAGAGTCGAGGACACGGCAGTCTATTCCTGTGTGAAGACCAAGGGGTTCGGGGACTTAC  270
V  89.8% (221/246)  IGHV3-21*01  227  ............A.......A...ACA.........C............T..G....A.....C..------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD3-10*01  11   ---------------------------------------------------------------------------..........G...-  24

                                      ---------------->                                  
                                      L  Q  P  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4416   271  TGCAGCCCTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.7% (43/44)    IGHJ4*02     5    -------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_53041

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           382     3e-108
IGHD2-15*01                                                                                           10.3    125   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCTAGAAATCCAGTTCGCCGGACTATC	ACTCC	ACGGTCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCTAGAAATCCAGTTCGCCGGACTATCACTCCACGGTCATTTTGACTAC	ARALEIQFAGLSLHGHFDY	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4417   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (247/250)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4417   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (247/250)  IGHV4-31*03  139  ..........................................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  A  L  E  I  Q  F  A 
                    Query_4417   181  AAGAACCAATTCTCCCTGAAACTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGCCCTAGAAATCCAGTTCGCC  270
V  98.8% (247/250)  IGHV4-31*03  229  ........G...........G.....................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       G  L  S  L  H  G  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4417   271  GGACTATCACTCCACGGTCATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  100.0% (5/5)     IGHD2-15*01  27   --------.....---------------------------------------------------  31
J  100.0% (43/43)   IGHJ4*02     6    ---------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_53046

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           413     2e-117
IGHD5-18*01                                                                                           14.1    9.5   
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGAG	TACATCTATG	CCTCGGGCGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGAGTACATCTATGCCTCGGGCGGACTGGGTCGACCAC	ARDRSTSMPRADWVDH	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  I  S  Y 
                    Query_4418   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTTATCAGTTAT  91
V  95.5% (277/290)  IGHV1-18*01  7    ............................A....................................T................C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  T  Y  N  A  N  T  N  S  A  Q 
                    Query_4418   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCTACAATGCCAACACAAACTCTGCACAG  181
V  95.5% (277/290)  IGHV1-18*01  97   ..........................................................G.G.T.......GT..........A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  I  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_4418   182  AACCTCCAGGGCAGAATCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAACTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.5% (277/290)  IGHV1-18*01  187  ..G............G...........................................G..............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  D  R  S  T  S  M  P  R  A  D  W  V  D  H  W  G  Q  G  T  L  V  T  V  S 
                    Query_4418   272  GTGTATTACTGTGCGAGAGATCGGAGTACATCTATGCCTCGGGCGGACTGGGTCGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  361
V  95.5% (277/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD5-18*01  6    --------------------------....G.....------------------------------------------------------  15
J  95.8% (46/48)    IGHJ5*02     4    ----------------------------------------------.....T......C...............................  47

                                          
                                       S  
                    Query_4418   362  TCAG  365
J  95.8% (46/48)    IGHJ5*02     48   ....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_53047

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           420     7e-120
IGHD1-20*01                                                                                           29.5    2e-04 
IGHJ3*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-20*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGAAAA	TATAACTGGAACGAC	GGAAT	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATAGC	ARVGKYNWNDGIAFDS	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	282	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  S  F  N 
                    Query_4419   1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCAGCTTCAAC  90
V  95.6% (282/295)  IGHV1-69*01  1    .......................G.......................C..................................C.....G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  F  A  V  N  W  V  R  Q  A  P  G  H  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  K  Y 
                    Query_4419   91   AGCTTTGCTGTCAACTGGGTGCGACAGGCCCCTGGACATGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAACAAAATAC  180
V  95.6% (282/295)  IGHV1-69*01  91   ....A....A...G........................A..........................................G....C...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  V  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_4419   181  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGGACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGAC  270
V  95.6% (282/295)  IGHV1-69*01  181  ..................................................C....C..................................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  V  G  K  Y  N  W  N  D  G  I  A  F  D  S  W  G  Q  G  T  I  V  T 
                    Query_4419   271  ACGGCCGTTTATTACTGTGCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATAGCTGGGGCCAAGGGACAATAGTCACC  360
V  95.6% (282/295)  IGHV1-69*01  271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (15/15)   IGHD1-20*01  3    ---------------------------------...............------------------------------------------  17
J  93.6% (44/47)    IGHJ3*02     4    -----------------------------------------------------...T.......T..................G......  40

                                                
                                       V  S  S  
                    Query_4419   361  GTCTCTTCAG  370
J  93.6% (44/47)    IGHJ3*02     41   ..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_69175

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           291     6e-81
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	213	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_4420   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  88.8% (213/240)  IGHV4-59*01  49   ..................A......................T.GT.A...C....G.............C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R 
                    Query_4420   91   TGGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGA  180
V  88.8% (213/240)  IGHV4-59*01  139  .......GG.....C.ATT................C..C...........C.....................G.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G 
                    Query_4420   181  CACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGT  270
V  88.8% (213/240)  IGHV4-59*01  229  ..G...........G....G............T..............G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-22*01  7    -----------------------------------------------------------------------------..........A..  19

                                      ----------------------->                                  
                                       G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4420   271  GGCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  328
D  93.3% (14/15)    IGHD3-22*01  20   ..--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    --------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_69174

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           449     3e-128
IGHD6-13*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAC	ATAGCAGCAGCTGGT	CGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTAC	ARSHSSSWSGFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	288	1	0	99.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_4421   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  99.7% (288/289)  IGHV5-51*03  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_4421   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  99.7% (288/289)  IGHV5-51*03  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  *  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4421   181  GTCCTTCCAAGGCCAGGTCACCATCTGAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  99.7% (288/289)  IGHV5-51*03  186  ..........................C...............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  S  H  S  S  S  W  S  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4421   271  CATGTATTACTGTGCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  99.7% (288/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)   IGHD6-13*01  5    -----------------------...............------------------------------------------------  19
J  100.0% (44/44)   IGHJ4*02     5    ------------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_126801

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           364     5e-103
IGHD3-10*01                                                                                           12.2    32    
IGHJ2*01                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCCGACCCTAGTGAATCTTA	ATTATA	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCCGACCCTAGTGAATCTTAATTATAACTGGTACTTCGATCTC	AKPTLVNLNYNWYFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4422   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (240/247)  IGHV3-23*01  47   ............................T.............................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  D  R  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4422   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGATAGAACATTTTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  97.2% (240/247)  IGHV3-23*01  137  ..............................G...C....AC.................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  T  L  V  N  L  N  
                    Query_4422   181  AGAACACGCTGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAAGCCGACCCTAGTGAATCTTAATT  270
V  97.2% (240/247)  IGHV3-23*01  227  ...................A................................A..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-10*01  24   ---------------------------------------------------------------------------------------...  26

                                      T------------------>                                  
                                      Y  N  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4422   271  ATAACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  100.0% (6/6)     IGHD3-10*01  27   ...---------------------------------------------------  29
J  100.0% (51/51)   IGHJ2*01     3    ---...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_53048

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           327     9e-92
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	AGCT	CGATTTTTGGACTGGTTATT	TTAGGTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAAGCTCGATTTTTGGACTGGTTATTTTAGGTAACTTTGACTAC	AGSSIFGLVILGNFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  A  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_4423   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTAGCAGTGCTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGG  90
V  92.0% (229/249)  IGHV4-39*01  49   .............................T...........C..T...AG.........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  N  T  Y  Y  N  P  S  L  R  S  R  L  H  M  S  V  D  T  S 
                    Query_4423   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAACACCTACTATAATCCGTCCCTCAGGAGTCGACTCCACATGTCCGTAGACACTTCT  180
V  92.0% (229/249)  IGHV4-39*01  139  ..................................G.........C..C..........A.......G..AC...A...........G..C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  I  F  G  L  V 
                    Query_4423   181  AAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCAGACACGGCTGTTTATTACTGTGCGGGAAGCTCGATTTTTGGACTGGTT  270
V  92.0% (229/249)  IGHV4-39*01  229  ...................A.....G...........................G............A..---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-3*01   7    -------------------------------------------------------------------------...........G.....  23

                                      GT------------------>                                  
                                       I  L  G  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4423   271  ATTTTAGGTAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  325
D  95.0% (19/20)    IGHD3-3*01   24   ...----------------------------------------------------  26
J  97.8% (44/45)    IGHJ4*02     4    ----------..................................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_53049

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ3*01                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATA	CTACAGGTCG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACAGGTCGTGATCCTTTTGATTTC	ARVSREYYDTTGRDPFDF	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4424   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4424   91   AGTGGGTGGCAGTTATTTGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  96.8% (241/249)  IGHV3-33*01  137  ................A.....................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_4424   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  96.8% (241/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  F  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_4424   271  CTACAGGTCGTGATCCTTTTGATTTCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
J  92.0% (46/50)    IGHJ3*01     1    ----------....G........G...................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_47721

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           338     5e-95
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GGG	CTATGCTTCGGGGAGTCATT	TCAAATCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGGGCTATGCTTCGGGGAGTCATTTCAAATCTCACTTTGACTAC	AKEGYASGSHFKSHFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  T  P  G  Q  G  L  
                    Query_4425   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAGTTATGGCATGCACTGGGTCCGCCAGACTCCAGGCCAGGGACTGG  90
V  93.2% (233/250)  IGHV3-30*18  47   ...........................................T..C........................G........A....G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  V  S  S  D  G  S  V  Q  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4425   91   AGTGGCTGGCAGTTGTATCAAGTGATGGAAGTGTTCAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCC  180
V  93.2% (233/250)  IGHV3-30*18  137  .....G........A.....TA..........AA.A.....................................................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      Q  N  T  L  Y  L  Q  M  N  S  L  R  S  E  D  T  A  V  Y  Y  C  A  K  E  G  Y  A  S  G  S  
                    Query_4425   181  AGAACACGCTGTATCTGCAAATGAATAGCCTGAGATCTGAGGATACGGCTGTTTATTACTGTGCGAAAGAGGGCTATGCTTCGGGGAGTC  270
V  93.2% (233/250)  IGHV3-30*18  227  .........................C.........G.......C........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (18/20)    IGHD3-10*01  7    -------------------------------------------------------------------------.....G..........T  23

                                      GT-------------------->                                  
                                      H  F  K  S  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4425   271  ATTTCAAATCTCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  90.0% (18/20)    IGHD3-10*01  24   ...------------------------------------------------------  26
J  100.0% (45/45)   IGHJ4*02     4    ------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_111778

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            420     7e-120
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	274	5	0	98.2


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_4426  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  98.2% (274/279)  IGHV6-1*01  26   ...........................................................G......G....AG.................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_4426  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.2% (274/279)  IGHV6-1*01  116  ..........................................................................................  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_4426  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.2% (274/279)  IGHV6-1*01  206  ..............A...........................................................................  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------CDR3-IMGT--------->                                  
                                     C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  A  M  V  T  V  S  S  
                    Query_4426  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGGCAATGGTCACCGTCTCTTCAG  336
V  98.2% (274/279)  IGHV6-1*01  296  .........---------------------------------------------------------  304
                                     C  A  R                                                           
J  95.7% (45/47)    IGHJ3*02    4    -------------------....T....................A.....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_336056

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           353     1e-99
IGHD2-15*01                                                                                           14.1    10   
IGHJ5*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACTCCACCTTTAAAATTT	GATATTG	ATGGTTTCCCTGAGGCCCCCGCGAT	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACTCCACCTTTAAAATTTGATATTGATGGTTTCCCTGAGGCCCCCGCGATCTGGCTCGACCCC	ARTPPLKFDIDGFPEAPAIWLDP	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	257	31	0	89.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  S  S  V  K  V  S  C  R  A  S  G  G  T  F  G  T  Y
                    Query_4427   1    GCAGCTGGTGCAGTCTGGAGCTGAGATGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGGCTTCTGGAGGCACCTTCGGTACCTA  90
V  89.2% (257/288)  IGHV1-69*06  6    ..................G......G....................................A...................A.C.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  V  T  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  G  F  I  P  I  F  G  T  A  N  N  T  Q
                    Query_4427   91   TGGAGTGACCTGGGTGCGGCAGGCCCCGGGACAACGACTTGAGTGGATGGGAGGGTTCATCCCCATCTTTGGAACAGCAAACAACACACA  180
V  89.2% (257/288)  IGHV1-69*06  96   ..CTA.C.G.........A........T......G.G..................A.......T........T.........T..G....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  M  D  K  A  T  N  T  A  Y  M  E  L  S  R  L  T  S  D  D  T  A
                    Query_4427   181  GAAGTTCCAGGGCAGAGTCACGATCACCATGGACAAAGCCACGAACACAGCCTACATGGAGCTGAGCAGGCTGACTTCTGACGACACGGC  270
V  89.2% (257/288)  IGHV1-69*06  186  ........................T...GC.......T......G........................C....GA.....G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        I  Y  Y  C  A  R  T  P  P  L  K  F  D  I  D  G  F  P  E  A  P  A  I  W  L  D  P  W  G  Q
                    Query_4427   271  CATCTATTACTGTGCGAGGACTCCACCTTTAAAATTTGATATTGATGGTTTCCCTGAGGCCCCCGCGATCTGGCTCGACCCCTGGGGCCA  360
V  89.2% (257/288)  IGHV1-69*06  276  .G.G..............------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  100.0% (7/7)     IGHD2-15*01  3    -------------------------------------.......----------------------------------------------  9
J  97.9% (46/47)    IGHJ5*02     5    ---------------------------------------------------------------------....T................  25

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_4427   361  GGGAACCCTGGTCACCGTCTCCTCAG  386
J  97.9% (46/47)    IGHJ5*02     26   ..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_261505

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            290     2e-80
IGHD6-19*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCCACGGGCTC	AGCAGTGGC	GATGACTCTGTTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCCACGGGCTCAGCAGTGGCGATGACTCTGTTTATGACTAC	VVHGLSSGDDSVYDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	21	8	0	72.4
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	16	5	0	76.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	214	29	0	88.1


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  R  V  S  G  G  S  I  S  D  S  H  W  W  N  W  V  R  Q  P  P  G  K  G  
                    Query_4428   1    GGTCCCTGAGACTCTCCTGTCGTGTCTCTGGTGGCTCCATCAGCGACAGTCACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  88.1% (214/243)  IGHV4-4*02   47   ..A.....TCC...A....CGC......................AGT...A.........G.............................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  V  F  H  S  G  S  A  K  Y  N  P  S  L  Q  S  R  L  T  M  S  L  D  K  S  
                    Query_4428   91   TGGAGTGGATTGGGGAAGTTTTTCACAGTGGGAGCGCCAAGTACAACCCGTCCCTTCAGAGTCGACTCACCATGTCACTAGACAAGTCTA  180
V  88.1% (214/243)  IGHV4-4*02   137  .................A.C.A...T.........A....C..............CA........G.......A...G..........C.  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  Q  F  S  L  K  L  Q  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  H  G  L  S  S  G  D  
                    Query_4428   181  GGAACCAGTTCTCCCTGAAGCTGCAGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGTGGTCCACGGGCTCAGCAGTGGCGATG  270
V  88.1% (214/243)  IGHV4-4*02   227  A......................AGC.....................................---------------------------  289
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                             
D  100.0% (9/9)     IGHD6-19*01  7    -----------------------------------------------------------------------------.........----  15

                                      ---------------->                                  
                                      D  S  V  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4428   271  ACTCTGTTTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (41/41)   IGHJ4*02     8    ----------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_261504

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           377     9e-107
IGHD3-10*01                                                                                           50.7    9e-11 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTT	GTATTACTATGGTTCGGGGAGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTGTATTACTATGGTTCGGGGAGTTATTCGGACTAC	ARSLYYYGSGSYSDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	245	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4429   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (245/249)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4429   91   CTGGAGTGGATTGGGCACATCTACTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTAACCATATCAGTAGACACGTCT  180
V  98.4% (245/249)  IGHV4-31*03  139  ...............T.......T............................................T.....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  Y  G  S 
                    Query_4429   181  AAGAACCAGTTCTCCCTGAAGCTGAGATCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGATCCTTGTATTACTATGGTTCG  270
V  98.4% (245/249)  IGHV4-31*03  229  ..........................C..........................................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (26/26)   IGHD3-10*01  1    --------------------------------------------------------------------------................  16

                                      ----------------->                                  
                                       G  S  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4429   271  GGGAGTTATTCGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (26/26)   IGHD3-10*01  17   ..........------------------------------------------  26
J  100.0% (40/40)   IGHJ4*02     9    ------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_261507

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            302     3e-84
IGHD3-9*01                                                                                            14.1    8.7  
IGHJ4*02                                                                                              41.1    2e-07


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GGATTATTTCGTATGATGACAGTGGT	CGATATT	CGGGTTCTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGATTATTTCGTATGATGACAGTGGTCGATATTCGGGTTCTAACTTTGACTCC	ARGIISYDDSGRYSGSNFDS	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	247	222	22	3	89.9


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4430  1    ACCCTGTCCCTCACCTGCATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  87
V  89.9% (222/247)  IGHV4-4*02  49   ..................GC.........T...TCC......A..AG........GG.......................G.........  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  K 
                    Query_4430  88   GAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCAAG  177
V  89.9% (222/247)  IGHV4-4*02  139  .......................T......A................................G.......A..................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><-------------------------CDR3
                                      N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  I  I  S  Y  D  D  S 
                    Query_4430  178  AATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGCCAGAGGGATTATTTCGTATGATGACAGT  267
V  89.9% (222/247)  IGHV4-4*02  229  ..CC.GT..........G....GC................................C.....G....-----------------------  295
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         

                                     -IMGT------------------------>                                  
                                      G  R  Y  S  G  S  N  F  D  S  W  G  Q  G  L  R  V  V  V  S  S  
                    Query_4430  268  GGTCGATATTCGGGTTCTAACTTTGACTCCTGGGGCCAGGGATTGCGCGTCGTCGTCTCCTCAG  331
D  100.0% (7/7)     IGHD3-9*01  7    ---.......------------------------------------------------------  13
J  82.2% (37/45)    IGHJ4*02    4    -------------------.........A.............ACC.TG...AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_261506

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           294     6e-82
IGHD6-25*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-25*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	CAGCGGCTA	AAACTACTCGATACAGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGATCAGCGGCTAAAACTACTCGATACAGTTGGTTCGACCCA	SRSAAKTTRYSWFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  G  S  G  F  S  F  I  S  Y  S  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4431   1    GGTCCCTGAGACTCTCCTGTTCAGGCTCTGGATTCTCTTTTATTTCGTATAGCATCAACTGGGTCCGCCAGGCTCCCGGGAAGGGGCTGG  90
V  87.9% (218/248)  IGHV3-21*01  47   ....................G...C..........A.C..C.G.AGC........G....................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  A  S  G  D  Y  I  Y  Y  I  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_4431   91   AGTGGGTCTCATCTGTCAGTGCTAGCGGTGACTACATATACTACATAGACTCAGTGAGGGGCCGATTCACCATCTCTAGAGACAACGCCA  180
V  87.9% (218/248)  IGHV3-21*01  137  .............CA.T...AG...TA..AGT............GC...........A..................C.............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  K  S  V  Y  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  S  R  S  A  A  K  T  T  R  
                    Query_4431   181  AGAAGTCAGTGTATCTGCAGATGAACGGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTTCGAGATCAGCGGCTAAAACTACTCGAT  270
V  87.9% (218/248)  IGHV3-21*01  227  ....C...C..........A......A...................................G.....----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-25*01  9    ---------------------------------------------------------------------.........------------  17

                                      ---------------->                                  
                                      Y  S  W  F  D  P  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_4431   271  ACAGTTGGTTCGACCCATGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  321
J  95.7% (44/46)    IGHJ5*02     6    -----...........C.....................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_261501

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           308     4e-86
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCAGTGC	TATTACGATTTTTGGAGTGGT	CATC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATCCAGTGCTATTACGATTTTTGGAGTGGTCATCCTACTTCGATATGGACGTC	ARDPVLLRFLEWSSYFDMDV	235	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	18	21	4	4	0	0	100
CDR1-IMGT	22	45	24	21	3	0	87.5
FR2-IMGT	46	96	51	50	1	0	98
CDR2-IMGT	97	120	24	19	5	0	79.2
FR3-IMGT	121	234	114	110	4	0	96.5
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	225	211	14	0	93.8


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  N  N  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  N  D
                    Query_4432   18   GTCTGGATTCACCTTCAGTAACAATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAATGGGTGGCAGTTATTTGGAATGA  107
V  93.8% (211/225)  IGHV3-33*01  72   ....................G.T...G.......................................G..............A...T....  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  V  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  E  N  T  L  Y  L  Q  M  N
                    Query_4432   108  TGGAGTTAAAAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCGAGAACACCCTGTATCTGCAAATGAA  197
V  93.8% (211/225)  IGHV3-33*01  162  ....AG...T......................................................A.......G.................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-------------------------CDR3-IMGT------------------
                                        S  L  R  D  E  D  T  A  V  Y  Y  C  A  R  D  P  V  L  L  R  F  L  E  W  S  S  Y  F  D  M
                    Query_4432   198  CAGCCTGAGAGACGAGGACACGGCTGTATATTACTGTGCGCGAGATCCAGTGCTATTACGATTTTTGGAGTGGTCATCCTACTTCGATAT  287
V  93.8% (211/225)  IGHV3-33*01  252  ...........C...............G............A....---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (21/21)   IGHD3-3*01   2    -----------------------------------------------------.....................----------------  22
J  94.2% (49/52)    IGHJ6*02     11   ------------------------------------------------------------------------------.....A..G...  22

                                      ------>                                 
                                        D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4432   288  GGACGTCTGGGGCCAAGGGACTACGGTCACCGTCTCCTCA  327
J  94.2% (49/52)    IGHJ6*02     23   .....................C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_261500

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           313     2e-87
IGHD2-2*01                                                                                            14.1    8.8  
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CCCGGA	TAGTACC	GCGGCGGT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGACACCCGGATAGTACCGCGGCGGTCTACTTTTACTACGGTATGGACGTC	TRHPDSTAAVYFYYGMDV	249	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	100	14	0	87.7
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	228	28	0	89.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  S  F  S  A  S  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4433   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCAGCTTTAGTGCCTCTAGTATGCACTGGGTCCGCCAGGCTCCCGGGAAAGGGCTGG  90
V  89.1% (228/256)  IGHV3-73*01  47   .........A...........C.........G....C...C....G....GC......................T...............  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  L  G  R  I  R  R  E  S  N  S  Y  A  T  E  Y  A  A  S  V  K  G  R  F  I  I  S  R  D  
                    Query_4433   91   AGTGGCTTGGCCGTATTAGAAGGGAGTCTAACAGTTACGCGACAGAATATGCTGCGTCGGTGAAAGGCAGGTTCATCATCTCCAGAGATG  180
V  89.1% (228/256)  IGHV3-73*01  137  .....G................CA.AG..................C.............................C..............  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  G  K  N  A  A  Y  L  Q  M  N  N  L  R  L  E  D  T  A  I  Y  Y  C  T  R  H  P  D  S  T  
                    Query_4433   181  ATGGAAAGAATGCGGCGTACCTGCAAATGAACAACCTGAGGCTCGAGGACACGGCCATATATTACTGTACTAGACACCCGGATAGTACCG  270
V  89.1% (228/256)  IGHV3-73*01  227  ..TC......CA.......T.............G.....AAAC.............G.G.................--------------  302
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (7/7)     IGHD2-2*01   13   ----------------------------------------------------------------------------------.......-  19

                                      -CDR3-IMGT--------------------->                                 
                                      A  A  V  Y  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4433   271  CGGCGGTCTACTTTTACTACGGTATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTCCTCA  335
J  94.8% (55/58)    IGHJ6*02     5    -------.....AC..........................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_261503

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           422     2e-120
IGHD5-12*01                                                                                           16.1    2.5   
IGHJ2*01                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAC	GGATGAGAGA	TGGCTACAATT	TTGTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACGGATGAGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTC	ATRMRDGYNFVDWYFDL	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  N  F  A  N  Y
                    Query_4434   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAACTTTGCCAACTA  90
V  96.6% (280/290)  IGHV5-51*01  6    .................................................................G...........G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_4434   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  96.6% (280/290)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  H  W  S  S  L  Q  A  S  D  T  A
                    Query_4434   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCACTGGAGTAGCCTCCAGGCCTCGGACACCGC  270
V  96.6% (280/290)  IGHV5-51*01  186  ............................................................G.....C.....GA................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  T  R  M  R  D  G  Y  N  F  V  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V
                    Query_4434   271  CATGTATTACTGTGCGACACGGATGAGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGT  360
V  96.6% (280/290)  IGHV5-51*01  276  .................G..----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  90.9% (10/11)    IGHD5-12*01  11   ------------------------------.......G...-------------------------------------------------  21
J  100.0% (51/51)   IGHJ2*01     3    -----------------------------------------------...........................................  45

                                              
                                        S  S  
                    Query_4434   361  CTCCTCAG  368
J  100.0% (51/51)   IGHJ2*01     46   ........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_127514

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         366     2e-103
IGHD3-16*02                                                                                           25.7    0.003 
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGCAGCC	TGGGGGAATTATCGTT	C	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGCAGCCTGGGGGAATTATCGTTCCTTTGACTAC	ARAAWGNYRSFDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  D  G  S  I  S  G  G  G  F  Y  W  S  W  L  R  Q  P  P  G  K  G 
                    Query_4435     1    ACCCTGTCCCTCACCTGCACTGTCTCTGATGGCTCCATCAGCGGTGGTGGTTTCTACTGGAGTTGGCTCCGCCAGCCCCCAGGGAAGGGC  90
V  97.2% (241/248)  IGHV4-30-4*01  49   ............................G.............A......A..A.............A.......................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4435     91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  97.2% (241/248)  IGHV4-30-4*01  139  ..........................................................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  A  A  W  G  N  Y  R 
                    Query_4435     181  AAGAACCACTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTTCTGTGCCAGGGCAGCCTGGGGGAATTATCGT  270
V  97.2% (241/248)  IGHV4-30-4*01  229  ........G.................................................A.........----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  93.8% (15/16)    IGHD3-16*02    17   ---------------------------------------------------------------------------.......G.......  31

                                        ----------->                                  
                                         S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4435     271  TCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  93.8% (15/16)    IGHD3-16*02    32   .---------------------------------------------  32
J  100.0% (44/44)   IGHJ4*02       5    --............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_336057

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           428     3e-122
IGHD1-26*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCG	AGTGGGAGCTACT	TGGGGCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTAC	ARDLEWELLGAFDY	290	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	70	1	0	98.6
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	292	283	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  R  
                    Query_4436   6    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGAT  95
V  96.9% (283/292)  IGHV1-69*06  5    ...................G....................................................................C.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  S  F  G  T  A  H  Y  A  
                    Query_4436   96   ATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTAGCTTTGGAACAGCACACTACGCAC  185
V  96.9% (283/292)  IGHV1-69*06  95   ..................................................................T......T......A.........  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  R  F  Q  G  R  V  T  I  T  A  D  R  S  T  S  T  A  Y  M  E  L  S  S  L  S  S  E  D  T  
                    Query_4436   186  AGAGATTCCAGGGCAGAGTCACGATTACCGCGGACAGATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGCTCTGAGGACACGG  275
V  96.9% (283/292)  IGHV1-69*06  185  ...AG...............................A.......................................A.............  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                  
                                      A  V  Y  Y  C  A  R  D  L  E  W  E  L  L  G  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4436   276  CCGTGTATTACTGTGCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  365
V  96.9% (283/292)  IGHV1-69*06  275  ......................--------------------------------------------------------------------  296
                                      A  V  Y  Y  C  A  R                                                                       
D  100.0% (13/13)   IGHD1-26*01  6    ---------------------------.............--------------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     6    -----------------------------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_261509

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           349     2e-98
IGHD3-9*01                                                                                            29.5    2e-04
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATCCAC	GTATAACGATGTTTTGACTGG	CCAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATCCACGTATAACGATGTTTTGACTGGCCATAACTGGTCCGACCCC	ARGSTYNDVLTGHNWSDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  L  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4437   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCATTCTCAGTAGTTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-48*03  47   ....................G...............CCT...................C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  V  R  G  S  T  I  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  H  A  
                    Query_4437   91   AGTGGGTTTCATACATTAGTGTTAGAGGTAGTACCATATACTACGCAGACTCTGTGCAGGGCCGATTTACCATCTCTAGAGACCACGCCA  180
V  94.8% (236/249)  IGHV3-48*03  137  ....................AG...T..............................A..........C........C......A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      T  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  S  T  Y  N  D  V  
                    Query_4437   181  CGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGATCCACGTATAACGATGTTT  270
V  94.8% (236/249)  IGHV3-48*03  227  A....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD3-9*01   1    ----------------------------------------------------------------------------....T.....A...  14

                                      IMGT--------------------->                                  
                                      L  T  G  H  N  W  S  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4437   271  TGACTGGCCATAACTGGTCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  90.5% (19/21)    IGHD3-9*01   15   .......-----------------------------------------------------  21
J  98.0% (48/49)    IGHJ5*02     3    -----------.......T.........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_187515

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         361     4e-102
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGCCTTCGGG	ACTATGTTTCGGGGAATTA	CT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGCCTTCGGGACTATGTTTCGGGGAATTACTACAACTGGTTCGACCCC	ARGLRDYVSGNYYNWFDP	246	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	113	1	0	99.1
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	239	8	0	96.8


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_4438     4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  96.8% (239/247)  IGHV4-30-4*01  50   .....TCC...A.....A..............................A.........................................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_4438     94   TGGAGTGGATTGGGTACATCTATTACAGTGGAAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCA  183
V  96.8% (239/247)  IGHV4-30-4*01  140  ...............................G..........................................................  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R  G  L  R  D  Y  V  S  
                    Query_4438     184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTGCTGTGCCAGGGGCCTTCGGGACTATGTTTCGG  273
V  96.8% (239/247)  IGHV4-30-4*01  230  .........................................................A.........-----------------------  296
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  89.5% (17/19)    IGHD3-10*01    6    ------------------------------------------------------------------------------......G.....  17

                                        IMGT--------------------->                                  
                                        G  N  Y  Y  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4438     274  GGAATTACTACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  89.5% (17/19)    IGHD3-10*01    18   ...G...-----------------------------------------------------  24
J  100.0% (51/51)   IGHJ5*02       1    ---------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_211829

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         399     3e-113
IGHD2-2*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATCGTCCGG	GCTATGCC	CAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTCCGGGCTATGCCCAATACTACTTTACCTAT	ARDRPGYAQYYFTY	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	75	72	71	1	0	98.6
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	105	9	0	92.1
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  D  S  F  T  N 
                    Query_4439     4    GTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGAGACAGCTTCACCAAC  93
V  93.8% (273/291)  IGHV5-10-1*01  4    ..G........................................................................T.......T....G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         S  W  I  S  W  V  R  Q  L  P  G  K  G  L  E  W  M  G  K  I  D  P  S  D  S  Y  T  I  H  S 
                    Query_4439     94   TCCTGGATCAGTTGGGTGCGCCAATTGCCCGGGAAAGGCCTGGAGTGGATGGGGAAGATTGATCCTAGTGACTCTTATACCATCCACAGT  183
V  93.8% (273/291)  IGHV5-10-1*01  94   .A.........C...........GA..............................G..........................A.T....C  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  L  N  T  A  Y  L  L  W  S  S  L  T  A  S  D  T 
                    Query_4439     184  CCGTCCTTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCCTCAACACTGCCTACTTGCTGTGGAGCAGCCTGACGGCCTCGGACACC  273
V  93.8% (273/291)  IGHV5-10-1*01  184  ..........................................A...G..........C...A..............A.............  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><----------------CDR3-IMGT--------------->                                 
                                         A  I  Y  Y  C  A  R  D  R  P  G  Y  A  Q  Y  Y  F  T  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_4439     274  GCCATTTATTACTGTGCGAGAGATCGTCCGGGCTATGCCCAATACTACTTTACCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  363
V  93.8% (273/291)  IGHV5-10-1*01  274  .....G...............---------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                      
D  100.0% (8/8)     IGHD2-2*01     24   -------------------------------........---------------------------------------------------  31
J  93.8% (45/48)    IGHJ4*02       1    -------------------------------------------........GA...C.................................  47

                                         
                                         
                    Query_4439     364  G  364
J  93.8% (45/48)    IGHJ4*02       48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_127510

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           402     3e-114
IGHD7-27*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGTCCTTTTA	CTAACTGGGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGTCCTTTTACTAACTGGGGTTGACTTT	AVLLLTGVDF	291	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	73	1	0	98.6
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	292	2	2	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  
                    Query_4440   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACAGCTTTACCA  93
V  94.5% (273/289)  IGHV5-51*03  2    .................................................................A........................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  F  I  G  W  V  R  Q  R  P  G  E  G  L  E  W  V  G  L  I  Y  P  G  D  S  D  T  R  Y  
                    Query_4440   94   ACTACTTCATCGGCTGGGTGCGCCAGAGGCCCGGGGAAGGCCTGGAGTGGGTGGGGCTCATTTATCCTGGTGACTCTGATACCAGGTACA  183
V  94.5% (273/289)  IGHV5-51*03  92   G.....GG...................T.......A..............A.....A....C.......................A....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  S  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_4440   184  ACTCGTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  94.5% (273/289)  IGHV5-51*03  182  G.C................G............................G..........C..............................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------CDR3-IMGT--------->                                  
                                      T  A  I  Y  Y  C  A  V  L  L  L  T  G  V  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4440   274  CCGCCATTTATTACTGTGCAGTCCTTTTACTAACTGGGGTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  354
V  94.5% (273/289)  IGHV5-51*03  272  .......G...........--------------------------------------------------------------  290
                                      T  A  M  Y  Y  C  A                                                              
D  100.0% (10/10)   IGHD7-27*01  1    -----------------------------..........------------------------------------------  10
J  95.2% (40/42)    IGHJ4*02     7    ---------------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_343829

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           327     9e-92
IGHD1-26*01                                                                                           12.2    32   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTAGACCA	AGTGGG	GCTGCGGGGGAACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTAGACCAAGTGGGGCTGCGGGGGAACAACTTTGACTAC	ARHVDQVGLRGNNFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	230	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  L  G  R  Y  Y  W  G  W  L  R  Q  P  P  G  K  G 
                    Query_4441   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACCCTTGGAAGATACTATTGGGGCTGGCTCCGCCAGCCCCCCGGGAAGGGG  90
V  91.6% (230/251)  IGHV4-39*01  49   ...............................G........G.AG.A.T..T.....C.........A.............A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  H  Y  S  G  S  P  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4441   91   CTGGAGTGGATTGCGAGTATTCATTACAGTGGGAGCCCCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCCGTAGACACGTCC  180
V  91.6% (230/251)  IGHV4-39*01  139  .............G......CT....T.........A.....................................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  H  F  S  L  R  L  R  S  V  T  A  S  D  T  A  V  Y  Y  C  A  R  H  V  D  Q  V  G  L 
                    Query_4441   181  AAGAACCACTTCTCCCTGAGGCTGAGGTCTGTGACCGCCTCAGACACGGCTGTATATTACTGTGCGAGACATGTAGACCAAGTGGGGCTG  270
V  91.6% (230/251)  IGHV4-39*01  229  ........G..........A......C............G.............G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-26*01  6    --------------------------------------------------------------------------------......----  11

                                      GT------------------>                                  
                                       R  G  N  N  F  D  Y  W  G  Q  G  S  L  A  T  V  S  S  
                    Query_4441   271  CGGGGGAACAACTTTGACTACTGGGGCCAGGGAAGTCTGGCCACCGTCTCCTCAG  325
J  93.3% (42/45)    IGHJ4*02     4    ----------........................CC....T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_343828

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           364     5e-103
IGHD2-15*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGC	ATTGTAATGGT	AACAGGTGTTGGGG	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGCATTGTAATGGTAACAGGTGTTGGGGCGTC	ARDRHCNGNRCWGV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4442   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAACAACTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (240/247)  IGHV3-53*01  47   .............................................G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  I  Y  S  G  G  T  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  
                    Query_4442   91   AGTGGGTCTCACTTATTTATAGCGGTGGTACCACACACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGA  180
V  97.2% (240/247)  IGHV3-53*01  137  ...........G..................G....T...................................................A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  R  H  C  N  G  N  R  
                    Query_4442   181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGATAGGCATTGTAATGGTAACAGGT  270
V  97.2% (240/247)  IGHV3-53*01  227  .................................C.................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  90.9% (10/11)    IGHD2-15*01  6    ------------------------------------------------------------------------......G....-------  16

                                      ---------->                                 
                                      C  W  G  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4442   271  GTTGGGGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (37/37)   IGHJ6*02     26   -------.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_16704

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           352     3e-99
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGAGAC	TTTGGAGTGGTTATTAT	GGGTGGTC	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGAGACTTTGGAGTGGTTATTATGGGTGGTCCGGTATGGACGTC	ARGRLWSGYYGWSGMDV	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	113	1	0	99.1
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	233	8	0	96.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  N  Y  H  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_4443   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAATTACCACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  96.7% (233/241)  IGHV4-59*01  50   .....TCC...A....C.........................G....T..........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_4443   94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  96.7% (233/241)  IGHV4-59*01  140  ........................................C.................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  L  W  S  G  Y  Y  G  
                    Query_4443   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGGGGAGACTTTGGAGTGGTTATTATGGGT  273
V  96.7% (233/241)  IGHV4-59*01  230  .............................................................-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (17/17)   IGHD3-3*01   12   ---------------------------------------------------------------------.................----  28

                                      ---------------->                                
                                      W  S  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_4443   274  GGTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  322
J  100.0% (45/45)   IGHJ6*02     17   ----.............................................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_16705

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            367     5e-104
IGHD3-22*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTG	ATTACTATGATAGTAGTGGTTA	CCCA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTGATTACTATGATAGTAGTGGTTACCCAGACTAC	EP*LL***WLPRL	239	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	238	114	112	0	2	98.2
CDR3-IMGT (germline)	239	243	5	5	0	0	100
Total	N/A	N/A	245	242	1	2	98.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4444   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  98.8% (242/245)  IGHV4-4*02   49   ..............................................G...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_4444   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  98.8% (242/245)  IGHV4-4*02   139  ..........................................................................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A    D  G  R  V  L  L  C  E  P  *  L  L  *  *  *  W  
                    Query_4444   181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGG--ACGGCCGTGTATTACTGTGCGAGCCTTGATTACTATGATAGTAGTGGT  268
V  98.8% (242/245)  IGHV4-4*02   229  ........................................AC.......................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (22/22)   IGHD3-22*01  3    ----------------------------------------------------------------------....................  22

                                      ----------->                                  
                                      L  P  R  L  L  G  P  G  N  P  G  H  R  L  L   
                    Query_4444   269  TACCCAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  314
D  100.0% (22/22)   IGHD3-22*01  23   ..--------------------------------------------  24
J  100.0% (40/40)   IGHJ4*02     9    ------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_16703

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           406     1e-115
IGHD2-15*01                                                                                           10.3    138   
IGHJ3*01                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	T	CTGCT	TCCGAAGACTTCGGCCCCC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGCTTCCGAAGACTTCGGCCCCCGATGCTTTTGATTTC	ARDLLPKTSAPDAFDF	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	69	2	0	97.2
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	44	7	0	86.3
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	292	276	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  I  S  C  K  A  S  G  Y  I  F  T  S  
                    Query_4445   6    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCATCTGGATACATCTTCACCAGCT  95
V  94.5% (276/292)  IGHV1-46*01  5    ...................G.................................G........................C...........  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  Y  L  S  W  V  R  Q  A  P  E  R  G  L  E  W  M  G  I  I  N  P  S  G  G  I  T  S  Y  A  
                    Query_4445   96   ACTATCTAAGCTGGGTGCGCCAGGCCCCTGAACGAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTATCACAAGCTACGCAC  185
V  94.5% (276/292)  IGHV1-46*01  95   .....A.GCA.........A..........G..A.........................................G..............  184
                                      Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  R  V  A  M  T  R  D  T  S  T  S  T  V  Y  M  Q  L  N  S  L  R  S  E  D  T  
                    Query_4445   186  AGAAGTTCCAGGGCAGAGTCGCCATGACCAGGGACACGTCCACTAGTACAGTCTACATGCAGCTGAACAGCCTGAGATCTGAGGACACGG  275
V  94.5% (276/292)  IGHV1-46*01  185  ....................A......................G..C............G......G.......................  274
                                      Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-------------------CDR3-IMGT------------------>                            
                                      A  V  Y  Y  C  A  R  D  L  L  P  K  T  S  A  P  D  A  F  D  F  W  G  Q  G  T  L  V  T  V  
                    Query_4445   276  CCGTGTATTACTGTGCGAGAGATCTGCTTCCGAAGACTTCGGCCCCCGATGCTTTTGATTTCTGGGGCCAAGGGACACTGGTCACCGTCT  365
V  94.5% (276/292)  IGHV1-46*01  275  ......................--------------------------------------------------------------------  296
                                      A  V  Y  Y  C  A  R                                                                       
D  100.0% (5/5)     IGHD2-15*01  22   -----------------------.....--------------------------------------------------------------  26
J  95.9% (47/49)    IGHJ3*01     2    -----------------------------------------------............G.................A............  44

                                            
                                      S  S  
                    Query_4445   366  CTTCAG  371
J  95.9% (47/49)    IGHJ3*01     45   ......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_16700

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           382     3e-108
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTA	ACGATTT	ACATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACGATTTACATTATGGTATGGACGTC	ARVNDLHYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4446   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATTCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (247/250)  IGHV4-31*01  49   ...................C................................................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 
                    Query_4446   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (247/250)  IGHV4-31*01  139  ..........................................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  D  L  H  Y  G 
                    Query_4446   181  AAGAACCAGCTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTTAACGATTTACATTATGGT  270
V  98.8% (247/250)  IGHV4-31*01  229  .........T............................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   6    -------------------------------------------------------------------------.......----------  12
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4446   271  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  312
J  100.0% (45/45)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_343820

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           402     3e-114
IGHD2-8*02                                                                                            12.2    34    
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	A	GTACTG	ACACC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTACTGACACCGACTAT	ARSTDTDY	284	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  D  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_4447   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCGGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  94.5% (273/289)  IGHV5-51*03  6    .............................A............G..................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  A  T  T  R  Y  S  P
                    Query_4447   91   CTGGATCGGCTGGGTGCGCCAGAGGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACGCTACTACCAGATACAGCCC  180
V  94.5% (273/289)  IGHV5-51*03  96   .......................T...............................A..............T..GA...............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  S  A
                    Query_4447   181  GTCGTTCGAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTTGCAGTGGAGCGGCCTGAAGGCCTCGGACAGCGC  270
V  94.5% (273/289)  IGHV5-51*03  186  ...C...C..............A................................C...........A..................C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------CDR3-IMGT------>                                  
                                        M  Y  Y  C  A  R  S  T  D  T  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_4447   271  CATGTATTATTGTGCGAGAAGTACTGACACCGACTATTGGGGCCAGGGCACCCTGGTCATCGTCTCCTCAG  341
V  94.5% (273/289)  IGHV5-51*03  276  .........C.........----------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                     
D  100.0% (6/6)     IGHD2-8*02   9    --------------------......---------------------------------------------  14
J  92.5% (37/40)    IGHJ4*02     9    -------------------------------.....C...........A..........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_343827

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           315     5e-88
IGHD6-13*01                                                                                           18.0    0.62 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTGGC	CAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTGGCCAGCAGCTGACTGACTAC	ARDSGQQLTDY	276	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	275	147	111	3	33	75.5
CDR3-IMGT (germline)	276	283	8	8	0	0	100
Total	N/A	N/A	283	244	6	33	86.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_4448   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  86.2% (244/283)  IGHV3-21*01  47   ..............................................C..................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  H  I  Y  Y  G  D  S  V  K  G  R  F  T  Y  Y  A  D  S  V  
                    Query_4448   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAGTCACATATATTATGGAGACTCAGTGAAGGGCCGATTCACCTATTACGCAGACTCAGTGA  180
V  86.2% (244/283)  IGHV3-21*01  137  ................................T.....---------------------------------..C................  193
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I                                   Y  Y  A  D  S  V  

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                      K  G  R  F  T  I  S  R  D  D  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  
                    Query_4448   181  AGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATT  270
V  86.2% (244/283)  IGHV3-21*01  194  ..........................A..........................................................G....  283
                                      K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-----------CDR3-IMGT----------->                                  
                                      Y  C  A  R  D  S  G  Q  Q  L  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4448   271  ACTGTGCGAGAGATTCTGGCCAGCAGCTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
V  86.2% (244/283)  IGHV3-21*01  284  .............-----------------------------------------------------------  296
                                      Y  C  A  R                                                              
D  100.0% (9/9)     IGHD6-13*01  9    --------------------.........-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_16709

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAGTTAT	CAGGGT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGGCTCCACCCC	ARSGSGSYQGWLHP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	227	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  I  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4449   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGATCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.8% (227/242)  IGHV4-59*01  49   .......................................................G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  H  I  F  Y  T  G  S  T  K  Y  K  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  K 
                    Query_4449   91   TGGCTTGGCCATATCTTTTACACTGGGAGCACCAAATACAAGCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCCAGGAAG  180
V  93.8% (227/242)  IGHV4-59*01  139  ...A....GT......A.....G............C.....C..........................A...G............A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  S  Y  Q  G  W 
                    Query_4449   181  CAGTTCTCCCTGAAACTGCGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGG  270
V  93.8% (227/242)  IGHV4-59*01  229  ..............G...A.C.........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (15/15)   IGHD3-10*01  11   ------------------------------------------------------------------...............---------  25
J  87.0% (40/46)    IGHJ5*02     6    ---------------------------------------------------------------------------------------...  8

                                      -------->                                  
                                       L  H  P  W  G  L  G  R  L  V  I  V  S  S  
                    Query_4449   271  CTCCACCCCTGGGGCCTGGGAAGACTGGTCATCGTCTCCTCAG  313
J  87.0% (40/46)    IGHJ5*02     9    T..G............A.....CC.......C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_127653

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           294     6e-82
IGHD3-16*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCTGCGGACTGG	GATTACG	GTT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCTGCGGACTGGGATTACGGTTACTGGTTTGACCAC	AKAADWDYGYWFDH	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	125	24	17	7	0	70.8
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	230	209	21	0	90.9


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  A  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 
                    Query_4450   15   TGTGCAGCCTCTGGATTCACCTTTAGCGCCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGGTATT  104
V  90.9% (209/230)  IGHV3-23*01  64   ...........................AG...........G............................................C....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  G  S  H  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  S  L 
                    Query_4450   105  AGTGGTGGTTCTCATAATACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTCTCTCTG  194
V  90.9% (209/230)  IGHV3-23*01  154  ......A..GG.GG..GC.................................................................G.A....  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><----------------CDR3-IMGT--------------->   
                                       R  M  N  N  L  R  A  E  D  A  A  L  Y  Y  C  A  K  A  A  D  W  D  Y  G  Y  W  F  D  H  W 
                    Query_4450   195  CGCATGAACAATCTCAGAGCCGAGGACGCGGCCCTATACTACTGTGCGAAGGCTGCGGACTGGGATTACGGTTACTGGTTTGACCACTGG  284
V  90.9% (209/230)  IGHV3-23*01  244  .AA.......GC..G............A.....G....T...........----------------------------------------  293
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  100.0% (7/7)     IGHD3-16*01  8    ---------------------------------------------------------------.......--------------------  14
J  93.8% (45/48)    IGHJ5*02     4    -------------------------------------------------------------------------.......C....C....  20

                                                                     
                                       G  Q  G  I  L  V  T  V  S  S  
                    Query_4450   285  GGCCAGGGAATCCTGGTCACCGTCTCCTCAG  315
J  93.8% (45/48)    IGHJ5*02     21   ..........C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_272688

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           346     2e-97
IGHD3-3*01                                                                                            21.8    0.046
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGGA	TTTTGGAGTGG	AGGACTCTGGAGTGGTCCGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGGATTTTGGAGTGGAGGACTCTGGAGTGGTCCGCCTTGACTAC	ARVDFGVEDSGVVRLDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	96	18	0	84.2
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	254	33	0	88.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  T  S  G  Y  P  F  R  N  Y 
                    Query_4451   2    CAGCTGGTGCAGTCTGGAGCTGAGGTTAAGAAGCCTGGCGCCTCAGTGAAGGTCGCCTGCAAGACTTCTGGTTACCCCTTTAGGAATTAC  91
V  88.5% (254/287)  IGHV1-18*04  7    ..........................G...........G...............T........G...........A......CC.GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  G  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  E 
                    Query_4451   92   GGTGTCGGTTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGGAACACAAACTATGCAGAG  181
V  88.5% (254/287)  IGHV1-18*04  97   ...A..A.C..........................G.........................C.........T...............C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  F  E  D  R  V  T  M  I  T  H  T  S  T  T  T  V  F  M  E  L  R  G  L  R  Y  D  D  T  A 
                    Query_4451   182  AATTTCGAGGACAGAGTCACAATGATCACACACACCTCCACGACCACAGTGTTCATGGAACTGAGGGGGCTGAGATATGACGACACGGCC  271
V  88.5% (254/287)  IGHV1-18*04  187  ..GC..C...G.........C....C....G....A.......G.....CC.A......G......A.C.......C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------CDR3-IMGT-------------------->                           
                                       V  Y  Y  C  A  R  V  D  F  G  V  E  D  S  G  V  V  R  L  D  Y  W  G  Q  G  A  L  V  S  V 
                    Query_4451   272  GTCTATTACTGTGCGAGGGTGGATTTTGGAGTGGAGGACTCTGGAGTGGTCCGCCTTGACTACTGGGGCCAGGGAGCCCTGGTCAGCGTC  361
V  88.5% (254/287)  IGHV1-18*04  277  ..G..............-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  100.0% (11/11)   IGHD3-3*01   11   -----------------------...........--------------------------------------------------------  21
J  92.9% (39/42)    IGHJ4*02     7    -------------------------------------------------------....................A.........C....  41

                                             
                                       S  S  
                    Query_4451   362  TCGTCAG  368
J  92.9% (39/42)    IGHJ4*02     42   ..C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_127657

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTATCGTTCGGGGACTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATCGTTCGGGGACTTATTTTGACTAC	ARGLYYYRSGTYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_4452   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ...................................................T.........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  T  R  I  T  I  S  V  D  T  S 
                    Query_4452   91   CTGGAGTGGATTGGGCACATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGACTCGAATTACCATATCAGTAGACACCTCC  180
V  96.0% (240/250)  IGHV4-31*03  139  ...............T..........C..................................G....G...................G..T  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  R  S 
                    Query_4452   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCTATTACTATCGTTCG  270
V  96.0% (240/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (22/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------.........G.....  16

                                      ----------------->                                  
                                       G  T  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_4452   271  GGGACTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  322
D  91.7% (22/24)    IGHD3-10*01  17   ....G....-------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------....................................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_127654

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            325     3e-91
IGHD3-3*01                                                                                            35.3    4e-06
IGHJ5*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGTCGTCGCCGAA	ACGATTTTTGGAGTGGTT	TTGAGAT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGTCGTCGCCGAAACGATTTTTGGAGTGGTTTTGAGATCTGGTTCGATTCA	ARLRRRRNDFWSGFEIWFDS	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  I  A  S  E  F  T  F  S  S  H  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4453  1    GGTCCCTGAGACTCTCCTGTATAGCCTCTGAATTCACCTTTAGTAGTCATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (228/248)  IGHV3-7*01  47   ....................GC........G...............CT..........C...............................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  N  H  D  G  S  E  T  K  Y  V  A  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4453  91   AGTGGGTGGCCAACATAAACCACGATGGAAGTGAGACAAAGTATGTGGCCTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.9% (228/248)  IGHV3-7*01  137  ...................G..A.............A.T.C.......A.........................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------------CD
                                     R  D  S  V  F  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  A  R  L  R  R  R  R  N  D  
                    Query_4453  181  GGGATTCAGTGTTTCTACAAATGAACAGCCTGAGAGTCGACGACACGGCTGTGTATTACTGTGCGAGACTTCGTCGTCGCCGAAACGATT  270
V  91.9% (228/248)  IGHV3-7*01  227  A.A.C...C...A...G...................C...G...........................----------------------  294
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-3*01  6    ------------------------------------------------------------------------------------......  11

                                     R3-IMGT------------------------>                                  
                                     F  W  S  G  F  E  I  W  F  D  S  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_4453  271  TTTGGAGTGGTTTTGAGATCTGGTTCGATTCATGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  336
D  100.0% (18/18)   IGHD3-3*01  12   ............------------------------------------------------------  23
J  91.5% (43/47)    IGHJ5*01    5    -------------------.........C..C........A.........G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_127655

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           325     3e-91
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACCGCGAAAGTGG	GGAGTGGT	C	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACCGCGAAAGTGGGGAGTGGTCTTGATATC	ARDTAKVGSGLDI	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  A  V  S  S  S  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  
                    Query_4454   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCGCCGTCAGCAGCAGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  91.6% (229/250)  IGHV4-61*01  50   .....TCC...A....C...............T..........TG...G...........G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  G  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  
                    Query_4454   94   TGGAATGGATTGGGTATATCTACTACGGTGGAGACACCAAGTACAACCCCTCCCTCAAGAGTCGCGTCACCATATCATTAGACACGTCCA  183
V  91.6% (229/250)  IGHV4-61*01  140  ....G.................T...A....GAG......C.......................A............G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  Q  F  S  L  K  L  S  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  D  T  A  K  V  G  S  
                    Query_4454   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGGCCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATACCGCGAAAGTGGGGAGTG  273
V  91.6% (229/250)  IGHV4-61*01  230  ................................A...................G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-3*01   15   ------------------------------------------------------------------------------------......  20

                                      ---------->                                  
                                      G  L  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_4454   274  GTCTTGATATCTGGGGCCAAGGGACAATGGTCATCGTCTCTTCAG  318
D  100.0% (8/8)     IGHD3-3*01   21   ..-------------------------------------------  22
J  97.6% (41/42)    IGHJ3*02     9    ---..............................C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_272682

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           347     7e-98
IGHD2-21*01                                                                                           10.3    123  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCC	CTATT	TCTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCCCTATTTCTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFLQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4455   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGGAGTGGTGGTTATTACTGGTCCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (235/248)  IGHV4-31*03  49   ..................................C......C...........C......AG............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_4455   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACTTACTACAACGCGTCCCTCAAGAGTCGACTTACAATATCAGTGGACACGTCT  180
V  94.8% (235/248)  IGHV4-31*03  139  ..................................G...C.........C.................G....C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  L  Q  E 
                    Query_4455   181  AAGAACCAGTTCTCCCTGAAGCTGACCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGGTCTTCCCTATTTCTCCAAGAA  270
V  94.8% (235/248)  IGHV4-31*03  229  .........................G...........................G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD2-21*01  22   ---------------------------------------------------------------------------.....----------  26

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4455   271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_201169

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACATG	ATTACCATGAT	TCCA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAACATGATTACCATGATTCCAGATGCTTTTGATATC	ARDNMITMIPDAFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  S  S  I  N  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  A 
                    Query_4456   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTAGCTCCATCAACAGTGGAGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGCC  90
V  94.4% (237/251)  IGHV4-31*03  49   ..............................G.........G......T........................................G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  D  S  G  G  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_4456   91   CTGGAGTGGATTGGATACATCTATGACAGTGGGGGCACCTCCTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCACTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ..............G.........T........A......A...........................T.........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  D  N  M  I  T  M  I 
                    Query_4456   181  AGGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACTGTCGCGGACACGGCCGTATATTACTGTGCGAGAGATAACATGATTACCATGATT  270
V  94.4% (237/251)  IGHV4-31*03  229  .A...................C...............C...............G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD3-22*01  3    ------------------------------------------------------------------------------.....T.....-  13

                                      ----------------->                                  
                                       P  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4456   271  CCAGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  100.0% (49/49)   IGHJ3*02     2    ---.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_127658

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_4457   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_4457   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_4457   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_4457   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_127659

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4458   1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  87.0% (214/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_4458   91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCACCATCTCAGTAGACAAGTCCAAG  180
V  87.0% (214/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A................A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_4458   181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  87.0% (214/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_4458   271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_272684

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           260     1e-71
IGHD2-8*02                                                                                            16.1    2.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGATGCGGCGGAGGGAATTCGGC	ACTGGTGG	GG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATGCGGCGGAGGGAATTCGGCACTGGTGGGGACTTCTTTGACCAC	ARMRRREFGTGGDFFDH	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	20	10	0	66.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	93	21	0	81.6
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	206	40	0	83.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  R  S  V  S  F  L  W  S  W  V  R  Q  D  P  G  K  G 
                    Query_4459   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTGAGGAGTGTGTCTTTCCTCTGGAGCTGGGTCCGCCAGGACCCAGGGAAGGGC  90
V  83.7% (206/246)  IGHV4-31*03  49   ....................................A.C..C....GTGG..A.TA..........A........C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  R  Y  Y  S  G  S  S  R  Y  N  P  S  L  G  S  R  V  S  M  S  L  D  T  S 
                    Query_4459   91   CTGGAGTGGATTGGTTACAGGTATTACAGTGGAAGTAGTCGGTATAATCCGTCCCTCGGGAGTCGAGTTTCCATGTCACTAGACACGTCT  180
V  83.7% (206/246)  IGHV4-31*03  139  ..............G....TC...........G..C.CCTAC..C..C.........AA..........A....A...G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       R  N  Q  F  S  L  K  L  T  S  V  T  T  A  D  A  A  I  Y  Y  C  A  R  M  R  R  R  E  F  G 
                    Query_4459   181  AGGAACCAATTTTCCCTGAAGTTGACCTCAGTGACGACCGCGGACGCGGCCATCTATTACTGTGCGCGGATGCGGCGGAGGGAATTCGGC  270
V  83.7% (206/246)  IGHV4-31*03  229  .A......G..C.........C...G...T.....TG........A.....G.G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      MGT-------------------->                                  
                                       T  G  G  D  F  F  D  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_4459   271  ACTGGTGGGGACTTCTTTGACCACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  328
D  100.0% (8/8)     IGHD2-8*02   11   ........--------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*02     1    ----------...A.......T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_272685

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            366     2e-103
IGHJ6*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AGGAGACTTCTAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAAGGAGACTTCTATTACTACTACTACACTTTGGACGTC	AREGDFYYYYYTLDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4460  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.8% (242/250)  IGHV3-9*01  47   ..........................................................................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  I  S  W  N  S  D  A  I  G  Y  A  D  S  A  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4460  91   AGTGGGTCTCAGGTATTAGTTGGAACAGTGATGCCATAGGCTATGCGGACTCTGCGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (242/250)  IGHV3-9*01  137  .........................T....G.AG....................T...................................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  R  E  G  D  F  Y  Y  Y  
                    Query_4460  181  AGAACTCCCTGTATCTGCAAATGAATAGTCTGAGACCTGAGGACACGGCCTTGTATTACTGTGCAAGAGAAGGAGACTTCTATTACTACT  270
V  96.8% (242/250)  IGHV3-9*01  227  .........................C.........G..............................A...--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
J  94.7% (54/57)    IGHJ6*02    6    -----------------------------------------------------------------------------------.......  12

                                     ---------------->                                 
                                     Y  Y  T  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4460  271  ACTACACTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  94.7% (54/57)    IGHJ6*02    13   .....GG.A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_214348

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           355     3e-100
IGHD3-22*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-22*01	IGHJ4*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTATCGACAT	TGGTTATT	TGGCTATTG	GGGGC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	239	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  L  T  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_4461   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCCTCACCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.2% (239/251)  IGHV4-39*01  49   ...............................G....A...G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4461   91   CTGGAGTGGATTGGGAGTTTGTATTATAGTGGCAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  95.2% (239/251)  IGHV4-39*01  139  ..................A.C...........G...............................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT---------------------------------------------------->                           
                                       K  N  H  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  H  W  L  F 
                    Query_4461   181  AAGAACCACTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATTATCGACATTGGTTATTT  270
V  95.2% (239/251)  IGHV4-39*01  229  ........G..C........G....G...T.........................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-22*01  19   ---------------------------------------------------------------------------------........-  26

                                                                               
                                       G  Y  W  G  P  G  N  P  G  H  R  L  L   
                    Query_4461   271  GGCTATTGGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  311
J  100.0% (33/33)   IGHJ4*02     16   --------.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_214347

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           400     9e-114
IGHD3-16*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATGTCACC	TGGGGG	TATTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATGTCACCTGGGGGTATTCTGACTAC	ARYVTWGYSDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	272	16	0	94.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y 
                    Query_4462   2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTAT  91
V  94.4% (272/288)  IGHV1-18*01  7    ...................C.................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  T  Y  N  H  N  T  H  F  A  Q 
                    Query_4462   92   GCCATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACTTACAATCATAACACACACTTTGCACAG  181
V  94.4% (272/288)  IGHV1-18*01  97   .GT....G..................................................G.G........GG.......A...A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_4462   182  AAACTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGTACCGCCTACATGGAACTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.4% (272/288)  IGHV1-18*01  187  ..G.........................................C..A...........G..............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  Y  V  T  W  G  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4462   272  GTATATTACTGTGCGAGATATGTCACCTGGGGGTATTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  94.4% (272/288)  IGHV1-18*01  277  ..G...............-------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD3-16*01  17   ---------------------------......----------------------------------------------  22
J  100.0% (41/41)   IGHJ4*02     8    --------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_214346

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           330     1e-92
IGHD6-6*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	TC	ATAGCAGTTCGT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACTCATAGCAGTTCGTACTACTATGAGTAC	TTHSSSYYYEY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	232	21	0	91.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  T  W  L  S  W  V  R  Q  D  P  E  K  G  L  
                    Query_4463   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACACCTGGCTGAGCTGGGTCCGCCAGGATCCAGAGAAGGGTCTGG  90
V  91.7% (232/253)  IGHV3-15*01  47   .......T.......................................G.....A..................C.....G......G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      A  W  V  G  R  I  K  S  E  T  H  G  G  T  T  D  Y  P  A  P  V  K  G  R  F  T  V  S  R  D  
                    Query_4463   91   CGTGGGTTGGCCGTATTAAAAGCGAGACTCATGGTGGGACAACAGACTACCCTGCACCCGTGAAAGGCAGATTCACCGTCTCTAGAGATG  180
V  91.7% (232/253)  IGHV3-15*01  137  A......................A.A...G....................G..........................A....A.......  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  D  T  L  Y  L  H  M  N  D  L  K  S  E  D  T  A  V  Y  F  C  T  T  H  S  S  S  Y  
                    Query_4463   181  ATTCAAAAGACACACTGTATCTGCACATGAACGACCTGAAAAGCGAGGACACAGCCGTGTATTTCTGCACCACTCATAGCAGTTCGTACT  270
V  91.7% (232/253)  IGHV3-15*01  227  ........A....G...........A......AG........C....................A...T.....-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  91.7% (11/12)    IGHD6-6*01   5    ---------------------------------------------------------------------------.......C....---  16
J  91.7% (44/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  Y  E  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_4463   271  ACTATGAGTACTGGGGTCAGGGAACCCGGGTCACCGTCTCCTCAG  315
J  91.7% (44/48)    IGHJ4*02     4    ...T...C........C..........T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_214344

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           347     7e-98
IGHD6-19*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAACGGCTGTAT	CAGTGACTGG	CACCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAACGGCTGTATCAGTGACTGGCACCCTTGACTAC	ARDRTAVSVTGTLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  N  Y  N  S  H  A  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4464   1    GGTCCCTGAGACTCTCCTGTGTTGCGTCTGGATTCAACTACAATAGCCATGCCTTGCACTGGGTCCGCCAGGCTCCGGGCAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-33*01  47   .....................CA.............C..T..G....T...G.A......................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  E  D  S  V  R  G  R  F  S  I  S  R  D  N  S  
                    Query_4464   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGAAGACTCCGTGAGGGGCCGGTTCAGCATCTCCAGAGACAATTCCA  180
V  94.4% (236/250)  IGHV3-33*01  137  .............................................C...........A......A....C....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  T  A  V  S  V  
                    Query_4464   181  AGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATAGAACGGCTGTATCAGTGA  270
V  94.4% (236/250)  IGHV3-33*01  227  ............................C.........................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD6-19*01  9    ------------------------------------------------------------------------------------.....G  14

                                      ---------------->                                  
                                      T  G  T  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4464   271  CTGGCACCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  90.0% (9/10)     IGHD6-19*01  15   ....-----------------------------------------------  18
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_214343

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           10.3    125  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGG	GGTAAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGGTAATTACTACTACGCTTTGGACGTC	ARGGGNYYYALDV	261	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	19	5	0	79.2
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	18	3	0	85.7
FR3-IMGT	147	260	114	104	10	0	91.2
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	245	22	0	91.8


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  A  S  I  T  N  Y  Y  W  S  W  I  R  
                    Query_4465   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATAACTAATTATTACTGGAGTTGGATCCGCC  90
V  91.8% (245/267)  IGHV4-59*01  26   ................T.....................................G......C.G..G...C........C........G.  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  M  F  Y  S  G  I  T  S  Y  T  P  S  L  Q  S  R  V  T  
                    Query_4465   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGCTATATGTTTTACAGTGGGATCACCAGCTACACCCCCTCCCTCCAGAGTCGAGTCACCA  180
V  91.8% (245/267)  IGHV4-59*01  116  ...............................G.....C.A...........G.....A.....A..........A...............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      M  S  V  D  T  S  K  K  Q  I  S  L  E  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_4465   181  TGTCAGTCGACACGTCCAAGAAGCAGATCTCCCTGGAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGGGG  270
V  91.8% (245/267)  IGHV4-59*01  206  .A.....A..............C...T........A......G...........................G................---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     
D  100.0% (5/5)     IGHD3-16*01  18   ---------------------------------------------------------------------------------------...  20

                                      -----CDR3-IMGT-------------->                                 
                                      G  G  N  Y  Y  Y  A  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4465   271  GGGGTAATTACTACTACGCTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (5/5)     IGHD3-16*01  21   ..------------------------------------------------------------  22
J  96.3% (52/54)    IGHJ6*02     9    --------..........G.A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_187656

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         402     3e-114
IGHD5-12*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCACAG	TAGTGGCCACG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCACAGTAGTGGCCACGACTACTTTGACTAC	ARLHSSGHDYFDY	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	106	8	0	93
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	275	18	0	93.9


Alignments

                                        <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                           M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  R  I  S  C  E  G  S  G  Y  T  F  A  
                    Query_4466     4    AAATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGCAGTCTCTGAGGATCTCCTGTGAGGGTTCTGGATACACCTTCGCCA  93
V  93.9% (275/293)  IGHV5-10-1*01  2    ..G.........................................G....................A...............G...TA...  91
                                           V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  

                                        T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                        T  Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  K  I  D  P  S  D  S  Y  T  N  Y  
                    Query_4466     94   CCTATTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAAGATTGATCCTAGTGACTCTTATACCAACTACA  183
V  93.9% (275/293)  IGHV5-10-1*01  92   G...C..................................................G.G................................  181
                                        S  Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  

                                        ----------------------------------------------FR3-IMGT------------------------------------
                                        S  P  S  F  Q  G  H  V  T  I  S  T  D  N  S  I  T  T  A  Y  L  Q  W  N  S  L  K  A  S  D  
                    Query_4466     184  GCCCGTCCTTCCAAGGCCACGTCACCATCTCAACTGACAATTCCATCACCACTGCCTACCTGCAGTGGAACAGTCTGAAGGCCTCGGACA  273
V  93.9% (275/293)  IGHV5-10-1*01  182  ................................G.......G.......G....................G...C................  271
                                        S  P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                        ----------------><--------------CDR3-IMGT-------------->                                  
                                        T  A  M  Y  Y  C  A  R  L  H  S  S  G  H  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4466     274  CAGCCATGTATTATTGCGCGAGACTTCACAGTAGTGGCCACGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  363
V  93.9% (275/293)  IGHV5-10-1*01  272  .C...........C..T......-------------------------------------------------------------------  294
                                        T  A  M  Y  Y  C  A  R                                                                    
D  90.9% (10/11)    IGHD5-12*01    8    -------------------------------.......T...------------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02       1    ------------------------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_214341

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           299     2e-83
IGHD1-26*01                                                                                           10.3    113  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	CCCCA	TGGGA	CCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACCCCATGGGACCCTTGACTAC	ANPMGPLTT	240	265	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	24	16	5	3	66.7
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	247	221	23	3	89.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  *  A  M  S  W  V  R  Q  T  P  G  R  G  L  
                    Query_4467   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGCTTCACCTTTAGCGACTAAGCCATGAGCTGGGTCCGCCAGACTCCGGGGAGGGGGCTGG  90
V  89.5% (221/247)  IGHV3-23*01  47   ...............................A............AG...T.....................G....A....A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  G  G  A     T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4467   91   AGTGGGTCTCATCTATCAGTGACGGTGGTGCTA---CATTCTACGCGGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCGA  177
V  89.5% (221/247)  IGHV3-23*01  137  ...........G....T....GTA......G..GCA...A......A.........................................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT------->  
                                      K  N  T  L  Y  L  Q  M  N  N  L  R  L  E  D  T  A  I  Y  Y  C  A  N  P  M  G  P  L  T  T  
                    Query_4467   178  AGAATACACTGTATCTGCAAATGAACAACCTGAGACTCGAGGACACGGCCATCTATTACTGTGCGAACCCCATGGGACCCTTGACTACTG  267
V  89.5% (221/247)  IGHV3-23*01  227  ....C..G...................G.......GC.............G.A..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD1-26*01  8    ------------------------------------------------------------------------.....-------------  12
J  97.6% (41/42)    IGHJ4*02     7    --------------------------------------------------------------------------------..........  16

                                                                      
                                      G  A  R  E  P  W  S  P  S  P  Q 
                    Query_4467   268  GGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  299
J  97.6% (41/42)    IGHJ4*02     17   ...................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_214340

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           294     7e-82
IGHD3-22*01                                                                                           14.1    8.8  
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGCCTGC	AGTAGTAATTACT	GTTATGACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGCCTGCAGTAGTAATTACTGTTATGACGACTACTTCTACGGTATGGACGTC	ARVACSSNYCYDDYFYGMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	96	18	0	84.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  T  G  N  Y  Y  W  T  W  I  R  Q  R  P  E  K  G 
                    Query_4468   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAACACTGGCAATTACTACTGGACCTGGATCCGCCAGCGCCCAGAGAAGGGC  90
V  87.6% (219/250)  IGHV4-31*03  49   ...............................G........G..G...TGG...........G..............A.....G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  N  G  I  T  Y  Y  S  P  S  L  R  G  R  I  A  I  S  V  D  R  S 
                    Query_4468   91   CTGGAGTGGATTGGATACATATATTACAATGGGATCACCTACTACAGCCCGTCCCTCCGGGGGCGAATTGCCATATCAGTAGACAGGTCT  180
V  87.6% (219/250)  IGHV4-31*03  139  ..............G.....C.......G.....G...........A..........AA.A.T...G..A...............C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  K  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  G  T  Y  Y  C  A  R  V  A  C  S  S  N  Y 
                    Query_4468   181  AAGAAACAATTCTCATTGAGGCTGAGCTCCGTGACTGCCGCGGACACGGGCACTTATTACTGTGCGAGAGTCGCCTGCAGTAGTAATTAC  270
V  87.6% (219/250)  IGHV4-31*03  229  .....C..G.....CC...A.........T...................C.GTG................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  84.6% (11/13)    IGHD3-22*01  17   ------------------------------------------------------------------------------...G..T.....  28

                                      DR3-IMGT------------------------>                                 
                                       C  Y  D  D  Y  F  Y  G  M  D  V  W  G  P  G  T  T  V  T  V  S  S 
                    Query_4468   271  TGTTATGACGACTACTTCTACGGTATGGACGTCTGGGGCCCAGGGACCACGGTCACCGTCTCCTCA  336
D  84.6% (11/13)    IGHD3-22*01  29   .-----------------------------------------------------------------  29
J  96.4% (54/56)    IGHJ6*02     7    ----------......A.......................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_120159

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-19*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              75.7    5e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCG	GCAGTGGCTGGTAC	GGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCGGCAGTGGCTGGTACGGGATTGACTAC	AKDRGSGWYGIDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_4469   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGCTGGATCCGGCAGACCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   .............................................T.......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_4469   91   TGGATTGGGTATATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ....................C...................................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  D  R  G  S  G  W  Y  G  I 
                    Query_4469   181  CAGTTCTCCCTGAGGCTGAACTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAAAGATCGCGGCAGTGGCTGGTACGGGATT  270
V  96.7% (237/245)  IGHV4-59*01  229  .............A.....G...........................G.............G...-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (14/14)   IGHD6-19*01  8    ----------------------------------------------------------------------..............------  21
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4469   271  GACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  310
J  97.6% (41/42)    IGHJ4*02     9    ...................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_120151

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           380     1e-107
IGHD3-10*01                                                                                           44.9    5e-09 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTT	GTATTACTTTGGTTCGGGGAGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTGTATTACTTTGGTTCGGGGAGTTATTCGGACTAC	ARSLYYFGSGSYSDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	246	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  N  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4470   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTAACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (246/249)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4470   91   CTGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (246/249)  IGHV4-31*03  139  ...............T..........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  F  G  S 
                    Query_4470   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGCGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGATCCTTGTATTACTTTGGTTCG  270
V  98.8% (246/249)  IGHV4-31*03  229  ...............................T.....................................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  96.2% (25/26)    IGHD3-10*01  1    --------------------------------------------------------------------------........A.......  16

                                      ----------------->                                  
                                       G  S  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4470   271  GGGAGTTATTCGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  96.2% (25/26)    IGHD3-10*01  17   ..........------------------------------------------  26
J  100.0% (40/40)   IGHJ4*02     9    ------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_120152

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            392     2e-111
IGHD1-1*01                                                                                            14.1    8.6   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACTAAAACAAGAC	CTGGGACGAC	G	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACTAAAACAAGACCTGGGACGACG	ARDTKTRPGTT	264	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	77	27	23	4	0	85.2
FR2-IMGT	78	128	51	50	1	0	98
CDR2-IMGT	129	149	21	19	2	0	90.5
FR3-IMGT	150	263	114	112	2	0	98.2
CDR3-IMGT (germline)	264	271	8	8	0	0	100
Total	N/A	N/A	271	261	10	0	96.3


Alignments

                                     <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                        G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  I  Y  Y  W  T  W  V  
                    Query_4471  1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTATTTACTACTGGACTTGGGTCC  90
V  96.3% (261/271)  IGHV4-4*02  26   ................T....................................................G.A...GG....G........  115
                                        G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                     --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                     R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  T  A  N  Y  N  P  S  L  K  S  R  V  
                    Query_4471  91   GCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGACCGCCAACTACAACCCGTCCCTCAAGAGTCGAGTCA  180
V  96.3% (261/271)  IGHV4-4*02  116  ......................................................G.A.................................  205
                                     R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                     ----------------------FR3-IMGT----------------------------------------------------><------
                                     T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  
                    Query_4471  181  CCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAG  270
V  96.3% (261/271)  IGHV4-4*02  206  ........................................G....G............................................  295
                                     T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  

                                     -----CDR3-IMGT----------->                                  
                                     D  T  K  T  R  P  G  T  T  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4471  271  ATACTAAAACAAGACCTGGGACGACGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
V  96.3% (261/271)  IGHV4-4*02  296  .-----------------------------------------------------------  296
                                                                                                 
D  90.0% (9/10)     IGHD1-1*01  8    ---------------....A.....-----------------------------------  17
J  100.0% (34/34)   IGHJ4*02    15   --------------------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_351201

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           282     4e-78
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	217	27	6	86.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_4472   4    CCCTGAGACTCTCCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.8% (217/250)  IGHV4-34*01  50   .....TCC...A..........C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_4472   94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.8% (217/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_4472   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.8% (217/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_4472   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_120154

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           420     7e-120
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ3*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AGGGG	AGTGGGAGC	CCCTTCTTAGAGGCA	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAAGGGGAGTGGGAGCCCCTTCTTAGAGGCACTTTTGATATC	AKEGEWEPLLRGTFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  S  A  V  K  V  A  C  K  A  S  G  G  T  F  S  N  Y
                    Query_4473   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGTCCGCGGTGAAAGTCGCCTGCAAGGCTTCTGGAGGCACCTTCAGCAACTA  90
V  96.2% (280/291)  IGHV1-69*01  6    ..................G..........A.............T.......G...T..............................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  F  F  G  T  A  N  Y  A  Q
                    Query_4473   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTTTCTTTGGTACAGCAAACTACGCACA  180
V  96.2% (280/291)  IGHV1-69*01  96   ....................................................G...........A.........................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  L  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_4473   181  GAGGTTGCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  96.2% (280/291)  IGHV1-69*01  186  ..A...C...................................................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  K  E  G  E  W  E  P  L  L  R  G  T  F  D  I  W  G  Q  G  T  M  V  I  V  S
                    Query_4473   271  CGTGTATTACTGTGCGAAAGAAGGGGAGTGGGAGCCCCTTCTTAGAGGCACTTTTGATATCTGGGGCCAAGGGACAATGGTCATCGTCTC  360
V  96.2% (280/291)  IGHV1-69*01  276  .................G...---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (9/9)     IGHD1-26*01  6    --------------------------.........-------------------------------------------------------  14
J  97.8% (44/45)    IGHJ3*02     6    --------------------------------------------------.................................C......  45

                                           
                                        S  
                    Query_4473   361  TTCAG  365
J  97.8% (44/45)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_120155

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            394     6e-112
IGHD1-20*01                                                                                           18.0    0.62  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TTG	ATAACTGGA	GA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTGATAACTGGAGA	VDNWR	292	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	71	3	0	95.9
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	106	8	0	93
CDR3-IMGT (germline)	292	292	1	1	0	0	100
Total	N/A	N/A	288	270	18	0	93.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  
                    Query_4474   5    AGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATACACCTTCACCA  94
V  93.8% (270/288)  IGHV1-8*01   2    ....G........G........................................................T...................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      R  F  D  I  H  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  S  D  F  
                    Query_4474   95   GATTTGATATCCACTGGGTGCGACAGGCCACTGGACAAGGACTTGAGTGGATGGGGTGGATGAACCCTAACAGTGGTAATTCAGACTTTG  184
V  93.8% (270/288)  IGHV1-8*01   92   .T.A.......A............................G..............A.......................CA...G..A..  181
                                      S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  K  F  P  G  R  V  T  L  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  D  D  
                    Query_4474   185  CACAGAAGTTCCCGGGCAGAGTCACCTTGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGGTCTGACGACA  274
V  93.8% (270/288)  IGHV1-8*01   182  ............A.............A....................................................A.....G....  271
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><--CDR3-IMGT-->                                  
                                      T  A  L  Y  Y  C  V  D  N  W  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4474   275  CGGCCTTATATTACTGTGTTGATAACTGGAGATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
V  93.8% (270/288)  IGHV1-8*01   272  .....G.G..........------------------------------------------------  289
                                      T  A  V  Y  Y  C                                                  
D  100.0% (9/9)     IGHD1-20*01  4    ---------------------.........------------------------------------  12
J  100.0% (34/34)   IGHJ4*02     15   --------------------------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_120157

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           338     4e-95
IGHD1-26*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	AC	AGTGGGAGC	ATT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTACAGAACAGTGGGAGCATTACTAC	TTEQWEHYY	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	24	6	0	80
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	236	20	0	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  N  D  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4475   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACTTTCAGTAACGACTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.2% (236/256)  IGHV3-15*01  47   .......T................C.......................C.........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  I  G  R  I  K  R  T  S  E  G  G  T  V  D  Y  A  A  P  V  T  G  R  F  T  I  S  R  D  
                    Query_4475   91   AGTGGATCGGCCGTATTAAAAGGACAAGTGAAGGTGGGACAGTAGACTACGCTGCACCCGTGACAGGCAGATTCACCATCTCAAGAGATG  180
V  92.2% (236/256)  IGHV3-15*01  137  .....G.T..............C.A..C...T.........AC....................A..........................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  N  S  I  L  Y  L  Q  M  N  S  L  K  I  E  D  T  A  V  Y  Y  C  T  T  E  Q  W  E  H  
                    Query_4475   181  ATTCAAATAGCATTCTGTACCTGCAAATGAACAGCCTGAAAATCGAGGACACAGCCGTGTATTACTGTACTACAGAACAGTGGGAGCATT  270
V  92.2% (236/256)  IGHV3-15*01  227  .......A.A..CG.....T......................C...........................C.....--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (9/9)     IGHD1-26*01  6    ------------------------------------------------------------------------------.........---  14

                                      ---->                                  
                                      Y  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4475   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (39/39)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_201166

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           282     4e-78
IGHD1-26*01                                                                                           10.3    123  
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TACTA	GTTTTTATCCCCCGTCGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACTAGTTTTTATCCCCCGTCGGACTGGTTCTTCGATCTC	ARDTSFYPPSDWFFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	96	18	0	84.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  K  A  S  G  F  T  F  K  N  Y  N  M  N  W  V  R  Q  V  P  G  K  G  L  
                    Query_4476   1    GGTCCCTGAGACTCTCCTGTAAAGCCTCTGGATTCACCTTCAAGAACTACAACATGAACTGGGTCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  86.0% (215/250)  IGHV3-21*01  47   ....................GC....................GT.G...T.G....................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  N  R  N  N  D  I  Q  Y  A  G  S  M  R  G  R  I  T  I  S  R  D  N  A  
                    Query_4476   91   AGTGGGTCTCGTCGATTAGGAATAGGAACAATGACATACAATACGCAGGCTCAATGAGGGGCCGAATCACCATCTCCAGAGACAACGCCA  180
V  86.0% (215/250)  IGHV3-21*01  137  ..........A..C.....T.G...T.GT.G.T.....T.C.......A....G...A.......T........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  S  S  L  F  L  H  L  S  N  L  G  A  E  D  T  A  I  Y  F  C  A  R  D  T  S  F  Y  P  P  
                    Query_4476   181  ACAGCTCACTGTTTCTCCACCTGAGCAACCTGGGAGCCGAGGACACGGCTATCTATTTCTGTGCGAGAGATACTAGTTTTTATCCCCCGT  270
V  86.0% (215/250)  IGHV3-21*01  227  .G.A........A...G..AA...A..G....A.................G.G....A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  15   ----------------------------------------------------------------------.....---------------  19

                                      T------------------>                                  
                                      S  D  W  F  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4476   271  CGGACTGGTTCTTCGATCTCTGGGGCCGTGGCACCCTCGTCACTGTCTCCTCAG  324
J  96.1% (49/51)    IGHJ2*01     3    ---......A...........................G................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_49458

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD6-6*01                                                                                            14.1    9.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTC	ATTREQLVPIFDF	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	106	8	0	93
CDR3-IMGT (germline)	289	292	4	4	0	0	100
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  L  T  
                    Query_4477   2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGCAAGGGCTCTGGATATAGCTTAACCA  91
V  93.1% (271/291)  IGHV5-51*01  2    ..G.............................................................T.....T........C.....T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  V  P  G  K  G  L  E  W  I  G  I  I  Y  P  A  D  S  E  T  K  Y  
                    Query_4477   92   GTTATTGGATCGCCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATTGGGATCATCTATCCTGCTGACTCTGAAACCAAATACA  181
V  93.1% (271/291)  IGHV5-51*01  92   .C..C.......G.............A.........................G................G.........T....G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  S  S  S  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_4477   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCGGCCGACAAGTCCAGCAGCTCCGCCTTCTTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  93.1% (271/291)  IGHV5-51*01  182  ...............................A.............T....A......A.C..............................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  A  I  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4477   272  CCGCCATATATTATTGTGCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTCTGGGGGCAGGGAACCCTGGTCACCGTCTCCTCAG  361
V  93.1% (271/291)  IGHV5-51*01  272  .......G.....C.......---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -----------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------.......A......C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_49456

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           403     9e-115
IGHD3-16*01                                                                                           10.3    124   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGAAAGA	GGGGG	CTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC	ARDQKEGAPDY	261	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	23	1	0	95.8
FR2-IMGT	75	125	51	51	0	0	100
CDR2-IMGT	126	146	21	20	1	0	95.2
FR3-IMGT	147	260	114	112	2	0	98.2
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	263	5	0	98.1


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  
                    Query_4478   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGC  90
V  98.1% (263/268)  IGHV4-59*01  26   ................T.................................................G.......................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  F  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_4478   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTTTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  98.1% (263/268)  IGHV4-59*01  116  .......................................A..................................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  
                    Query_4478   181  TATCAGTAGACACGTCCAAGAACCAATTCTCCCTGAAACTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATC  270
V  98.1% (263/268)  IGHV4-59*01  206  .........................G...........G..................................................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      --CDR3-IMGT----------->                                  
                                      Q  K  E  G  A  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4478   271  AGAAAGAGGGGGCTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (5/5)     IGHD3-16*01  18   -------.....---------------------------------------------  22
J  100.0% (41/41)   IGHJ4*02     8    ----------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_49457

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCAC	ARAPPFDYDLDVRGIHNFDH	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_4479   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  94.7% (230/243)  IGHV4-59*01  50   .....TCC...A....C.........................G...............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S  
                    Query_4479   94   GGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAGCC  183
V  94.7% (230/243)  IGHV4-59*01  140  .........A.................G.............................................A.............A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D  
                    Query_4479   184  AGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGACG  273
V  94.7% (230/243)  IGHV4-59*01  230  .................AG...........................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD3-22*01  6    ---------------------------------------------------------------------------........-------  13

                                      T------------------------>                                  
                                      V  R  G  I  H  N  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4479   274  TAAGGGGAATCCACAACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
J  97.8% (44/45)    IGHJ4*02     4    ---------------........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_49455

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*05                                                                                           319     2e-89
IGHD5-12*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*05	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTGGAC	GTGGCTACGATT	TTCCTCTGGGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATCGTGGACGTGGCTACGATTTTCCTCTGGGTTACTTTGACTAT	ARDRGRGYDFPLGYFDY	237	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	21	3	0	87.5
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	244	8	7	1	0	87.5
Total	N/A	N/A	232	218	14	0	94


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  S  F  S  D  F  Y  M  S  W  M  R  Q  A  P  G  K  G  L  E  W  V  S  F  I  
                    Query_4480   13   GTGCAGCCTCTGGATTCTCCTTCAGTGACTTCTACATGAGCTGGATGCGTCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATTCATTA  102
V  94.0% (218/232)  IGHV3-11*05  65   .................A............A...............C..C..................................A.....  154
                                         A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  T  S  T  Y  T  N  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  K  N  S  L  S  L  
                    Query_4480   103  GTAGCACTAGTACTTACACAAACTACGCAGACTCTGTGCGGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTCTCTGC  192
V  94.0% (218/232)  IGHV3-11*05  155  ....T.G.....G.........................AA............................................A.....  244
                                      S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><--------------------CDR3-IMGT----------------
                                      Q  M  N  S  L  R  A  E  D  T  G  V  Y  F  C  A  R  D  R  G  R  G  Y  D  F  P  L  G  Y  F  
                    Query_4480   193  AAATGAACAGCCTGAGAGCCGAGGACACGGGCGTGTATTTCTGTGCCAGAGATCGTGGACGTGGCTACGATTTTCCTCTGGGTTACTTTG  282
V  94.0% (218/232)  IGHV3-11*05  245  ..............................C........A......G.....--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (12/12)   IGHD5-12*01  10   ------------------------------------------------------------............------------------  21
J  95.7% (44/46)    IGHJ4*02     3    -----------------------------------------------------------------------------------.......  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4480   283  ACTATTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  321
J  95.7% (44/46)    IGHJ4*02     10   ....C.............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_49452

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           260     1e-71
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	93	21	0	81.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	205	39	0	84


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_4481   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  84.0% (205/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_4481   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  84.0% (205/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_4481   181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACGTAT  270
V  84.0% (205/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_4481   271  GTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    ---------------------------------...G....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_49453

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           313     1e-87
IGHD6-25*01                                                                                           12.2    31   
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-25*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGGG	GCATCGGCT	GAGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGGGCATCGGCTGAGGGGTGGTTCGACCCC	AGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  L  S  D  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4482   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGGTTCATGTTGAGTGATTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.0% (222/244)  IGHV3-33*03  47   ...............................A....CC..C...AGC.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  K  K  Y  Y  V  D  S  V  K  D  R  F  T  I  S  R  D  D  S  
                    Query_4482   91   AGTGGGTGGCAGTTATATGGTATGACGGAATTAAAAAATACTATGTAGACTCCGTGAAGGACCGATTCACCATCTCCAGAGACGACTCCA  180
V  91.0% (222/244)  IGHV3-33*03  137  .........................T....G...T..........C..............G......................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  V  D  D  T  A  L  Y  Y  C  A  G  A  S  A  E  G  W  F  
                    Query_4482   181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGTCGACGACACGGCTCTTTATTATTGTGCAGGGGCATCGGCTGAGGGGTGGTTCG  270
V  91.0% (222/244)  IGHV3-33*03  227  .......G....A......A................C...G.........G.G.....C.....--------------------------  290
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  88.9% (8/9)      IGHD6-25*01  8    --------------------------------------------------------------------...G.....-------------  16
J  97.8% (45/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_4482   271  ACCCCTGGGGCCAGGGAACCGTGGTCACCGTCTCCTCAG  309
J  97.8% (45/46)    IGHJ5*02     13   ....................C..................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_49450

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           283     1e-78
IGHD1-1*01                                                                                            14.1    8.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TACGAGTGCTT	GGTACAA	TTTGGGAGCCC	TTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATACGAGTGCTTGGTACAATTTGGGAGCCCTTGAATAT	AKDTSAWYNLGALEY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	19	5	0	79.2
FR2-IMGT	51	101	51	46	5	0	90.2
CDR2-IMGT	102	125	24	18	6	0	75
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	233	207	26	0	88.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  T  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 
                    Query_4483   15   TGTGCAGCCTCTGGATTTACTTTTACCAATTATGCCATGAGCTGGGTCCGCCAGGCTCCTGGGAAGGGTCTGGAATGGGTCTCAAGTATA  104
V  88.8% (207/233)  IGHV3-23*01  64   .................C..C....G..GC.............................A........G.....G.........GC...T  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  D  G  G  D  I  T  E  Y  A  D  F  V  K  G  R  F  T  I  S  R  D  A  S  K  N  T  L  Y  L 
                    Query_4483   105  AGTGATGGTGGTGATATTACAGAGTATGCAGACTTCGTGAAGGGCCGGTTCACCATCTCCAGAGACGCTTCCAAGAACACGCTGTATCTG  194
V  88.8% (207/233)  IGHV3-23*01  154  ....G.A......G..GC...T.C..C.......C...............................AA......................  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------CDR3-IMGT----------------->
                                       Q  M  S  R  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  T  S  A  W  Y  N  L  G  A  L  E  Y 
                    Query_4483   195  CAAATGAGCAGACTGAGAGCCGACGACACGGCCGTATATTATTGTGCGAAAGATACGAGTGCTTGGTACAATTTGGGAGCCCTTGAATAT  284
V  88.8% (207/233)  IGHV3-23*01  244  .......A...C...........G.................C...........-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (7/7)     IGHD1-1*01   1    ----------------------------------------------------------------.......-------------------  7
J  95.2% (40/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------....C..C  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4483   285  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  95.2% (40/42)    IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_49451

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           318     6e-89
IGHD3-16*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  F  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4484   1    ACCCTGTCCCTCACCTGCACTGTGTTTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  90.8% (226/249)  IGHV4-61*01  49   .......................C.C...............C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S 
                    Query_4484   91   CTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  90.8% (226/249)  IGHV4-61*01  139  ....A.........GT............G......CAC..A.........................G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y 
                    Query_4484   181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTAT  270
V  90.8% (226/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------------.....  28

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_4484   271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
D  100.0% (7/7)     IGHD3-16*02  29   ..--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_344492

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           271     6e-75
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GGGCCAGAGA	AGTAGGACC	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGAGGGCCAGAGAAGTAGGACCCTTGACTAC	ATEGQRSRTLDY	239	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	18	28	11	11	0	0	100
CDR1-IMGT	29	52	24	19	5	0	79.2
FR2-IMGT	53	103	51	47	4	0	92.2
CDR2-IMGT	104	124	21	17	4	0	81
FR3-IMGT	125	238	114	100	14	0	87.7
CDR3-IMGT (germline)	239	246	8	7	1	0	87.5
Total	N/A	N/A	229	201	28	0	87.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  N  N  Y  M  S  W  V  R  Q  A  P  G  M  G  L  E  W  V  S  L  I  
                    Query_4485   18   GTGCAGCCTCTGGATTCACCTTCAGTAATAACTATATGAGTTGGGTCCGCCAGGCTCCAGGGATGGGGCTGGAGTGGGTCTCTCTTATTT  107
V  87.8% (201/229)  IGHV3-53*01  65   .............G......G......GC.....C.....C......................A..................AG......  154
                                         A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  

                                      --CDR2-IMGT-----><----------------------------------------------------FR3-IMGT------------
                                      Y  S  G  G  G  S  F  Y  T  H  S  V  E  G  R  F  T  I  S  R  D  D  Y  K  N  T  V  Y  L  Q  
                    Query_4485   108  ACAGCGGTGGTGGCTCCTTCTACACACACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACGATTACAAGAACACGGTTTATCTTCAAA  197
V  87.8% (201/229)  IGHV3-53*01  155  .T.........A..A.A.A....G..G........A..........................A...C..........C.G..........  244
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  

                                      ----------------------------------------><-------------CDR3-IMGT------------>             
                                      M  N  N  V  R  A  E  D  T  A  I  Y  Y  C  A  T  E  G  Q  R  S  R  T  L  D  Y  W  G  Q  G  
                    Query_4485   198  TGAACAATGTTAGAGCCGAGGACACGGCCATATATTACTGTGCGACAGAGGGCCAGAGAAGTAGGACCCTTGACTACTGGGGCCAGGGAA  287
V  87.8% (201/229)  IGHV3-53*01  245  ......GCC.G..................G.G.............G...-----------------------------------------  293
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                            
D  88.9% (8/9)      IGHD2-2*01   11   -----------------------------------------------------------.....T...----------------------  19
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------------------------.....................  27

                                                           
                                      T  L  V  I  V  S  S  
                    Query_4485   288  CCCTGGTCATCGTCTCCTCAG  308
J  97.6% (41/42)    IGHJ4*02     28   .........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_201163

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           282     3e-78
IGHD5-18*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTTCG	CAAGGGGATAAC	TACAGCTA	CGAATAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGCAAGGGGATAACTACAGCTACGAATAT	SQGDNYSYEY	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	9	12	0	42.9
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	242	3	2	1	0	66.7
Total	N/A	N/A	242	211	31	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  I  S  R  F  P  V  S  W  N  Y  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4486   1    GGTCCCTGAGACTCTCCTGTGTAATCTCTAGGTTCCCCGTCAGTTGGAACTACATCAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.2% (211/242)  IGHV3-53*01  47   .....................C.GC....G.....A........A.C........G.G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  F  V  S  V  F  H  A  S  G  T  M  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_4486   91   AATTTGTCTCGGTTTTCCATGCCTCTGGCACAATGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGG  180
V  87.2% (211/242)  IGHV3-53*01  137  .G.GG.....A...A.TT..AG.GG...T.GC.CA.....C................................................A  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------CDR3-IMGT---------> 
                                      D  T  L  Y  L  Q  M  N  C  L  R  A  E  D  T  A  V  Y  Y  C  S  Q  G  D  N  Y  S  Y  E  Y  
                    Query_4486   181  ACACACTGTATCTTCAAATGAACTGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTTCGCAAGGGGATAACTACAGCTACGAATATT  270
V  87.2% (211/242)  IGHV3-53*01  227  ....G..................A.........................G.........G..----------------------------  288
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  100.0% (8/8)     IGHD5-18*01  6    --------------------------------------------------------------------------........--------  13
J  97.1% (33/34)    IGHJ4*02     15   -----------------------------------------------------------------------------------------.  15

                                                                       
                                      W  G  Q  G  T  R  V  T  V  S  S  
                    Query_4486   271  GGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  303
J  97.1% (33/34)    IGHJ4*02     16   ...............T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_95320

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         310     1e-86
IGHD3-16*02                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CA	TTATCG	ACATTGGTTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTATTTGACTAT	ARHYRHWLFDY	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	102	12	0	89.5
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  D  V  S  G  Y  S  I  T  T  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_4487     1    ACCCTGTCCCTCACCTGCGACGTCTCTGGTTACTCCATAACTACTGGTTACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  90.2% (222/246)  IGHV4-38-2*01  49   ...................CT.................C.GC.G..............................................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  M  Y  H  G  G  D  T  Y  Y  N  S  S  I  R  S  R  V  T  M  S  V  D  T  S  K 
                    Query_4487     91   GAGTGGATTGGGAGTATGTATCACGGTGGAGACACCTACTACAACTCGTCCATTAGGAGTCGAGTCACCATGTCAGTGGACACGTCCAAG  180
V  90.2% (222/246)  IGHV4-38-2*01  139  .................C.....TA....GAG.............C.....C.C.A...............A.....A............  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                         N  Q  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  H  W  L  F  D 
                    Query_4487     181  AACCAGTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACATTATCGACATTGGTTATTTGAC  270
V  90.2% (222/246)  IGHV4-38-2*01  229  ........C........G....G...T....................C..G...............------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD3-16*02    25   --------------------------------------------------------------------......----------------  30
J  97.7% (42/43)    IGHJ4*02       6    ------------------------------------------------------------------------------------......  11

                                        -->                                  
                                         Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4487     271  TATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.7% (42/43)    IGHJ4*02       12   ..C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_85105

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4488   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_4488   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_4488   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_4488   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_211832

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD4-17*01                                                                                           27.6    7e-04
IGHJ3*01                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	N/A	TGACTACGGTGACT	TCTT	TGATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATGACTACGGTGACTTCTTTGATTCTTTTGAATCG	AKDDYGDFFDSFES	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  Q  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4489   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTCAGAACTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGAAAGGGACTGG  90
V  90.4% (226/250)  IGHV3-23*01  47   .........................................AGC.G............C....................G.....G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  S  S  A  S  G  G  R  T  F  Y  A  D  S  V  K  G  R  F  R  I  S  R  D  N  S  
                    Query_4489   91   AGTGGGTCTCCACGAGTAGTGCTAGTGGTGGTCGTACATTCTACGCAGACTCCGTGAAGGGCCGGTTCAGGATCTCCAGAGACAATTCCA  180
V  90.4% (226/250)  IGHV3-23*01  137  ..........AG.T.T.....G..........A.C....A.............................CC...................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  F  L  Q  M  N  S  L  R  G  E  D  T  A  L  Y  Y  C  A  K  D  D  Y  G  D  F  F  
                    Query_4489   181  AGAACACATTGTTTCTGCAAATGAACAGCCTCAGAGGCGAGGACACGGCCCTATATTACTGTGCGAAGGATGACTACGGTGACTTCTTTG  270
V  90.4% (226/250)  IGHV3-23*01  227  .......GC...A..................G....C.............G................A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (14/14)   IGHD4-17*01  1    ----------------------------------------------------------------------..............------  14
J  86.0% (43/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------------..  2

                                      ------------->                                  
                                      D  S  F  E  S  W  G  Q  G  T  M  V  S  V  S  S  
                    Query_4489   271  ATTCTTTTGAATCGTGGGGCCAAGGGACAATGGTCAGCGTCTCCTCAG  318
J  86.0% (43/50)    IGHJ3*01     3    ..G.......TGTC......................C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_211833

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           304     1e-84
IGHD3-10*01                                                                                           18.0    0.60 
IGHJ1*01                                                                                              37.2    2e-06


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGAAACCCCCGA	ACTGTGGTTCGG	CCACTTATCTAACCTTGACTTG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGAAACCCCCGAACTGTGGTTCGGCCACTTATCTAACCTTGACTTG	ARDETPELWFGHLSNLDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  T  M  T  W  V  R  L  A  P  R  K  G  L  
                    Query_4490   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTTCCTATACCATGACCTGGGTCCGCCTGGCTCCACGGAAGGGGCTGG  90
V  88.8% (222/250)  IGHV3-21*01  47   .....................................C......AG.....G.....A...........A.......G............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  K  T  T  T  Y  E  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4490   91   AGTGGGTTTCATCTATTAGTAAAACTACTACTTATGAAGACTACGCAGACTCTGTGAAGGGGCGATTCACCATCTCCAGAGACAACGCCA  180
V  88.8% (222/250)  IGHV3-21*01  137  .......C.....C.......GT.G..G..G...CAT.T.............A........C............................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  D  E  T  P  E  L  W  
                    Query_4490   181  AGAATTCTCTCTTTCTACAAATGAACAGCCTGAGGGCCGAGGACACGGCTGTTTATTTCTGTGCGAGAGACGAAACCCCCGAACTGTGGT  270
V  88.8% (222/250)  IGHV3-21*01  227  ....C..A..G.A...G.................A.................G....A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD3-10*01  6    ----------------------------------------------------------------------------------...A....  13

                                      IMGT--------------------->                                  
                                      F  G  H  L  S  N  L  D  L  W  G  Q  G  T  L  L  I  V  S  S  
                    Query_4490   271  TCGGCCACTTATCTAACCTTGACTTGTGGGGCCAGGGCACCCTCCTAATTGTCTCCTCAG  330
D  91.7% (11/12)    IGHD3-10*01  14   ....--------------------------------------------------------  17
J  85.3% (29/34)    IGHJ1*01     19   --------------------------.................GG.C.CC..........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_110700

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           349     2e-98
IGHD1-1*01                                                                                            10.3    120  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	CAACT	CACGGCCGCCTT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCAACTCACGGCCGCCTTACTTCTTTGACTAC	ARGGNSRPPYFFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  V  S  G  F  T  F  R  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4491   1    GGTCCCTGAGACTCTCCTGTGTAGTCTCTGGATTCACCTTTAGGACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-21*01  47   .....................C..C...............C..T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  G  S  S  T  S  L  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4491   91   AGTGGGTCTCATCCATTGGTAGTAGTACTAGTCTCATATACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (236/249)  IGHV3-21*01  137  .................A.........G....TA............A...........................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  A  R  G  G  N  S  R  P  P  
                    Query_4491   181  AGAACTCAGTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCTGTGTATTACTGTGCGAGAGGGGGCAACTCACGGCCGCCTT  270
V  94.8% (236/249)  IGHV3-21*01  227  ........C...........................C...G............................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-1*01   5    -------------------------------------------------------------------------.....------------  9

                                      ------------->                                  
                                      Y  F  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_4491   271  ACTTCTTTGACTACTGGGGCCAGGGAAGTCTGGTCACCGTCTCCTCAG  318
J  93.8% (45/48)    IGHJ4*02     1    ...A.......................CC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_211831

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           357     1e-100
IGHD1-1*01                                                                                            10.3    121   
IGHJ6*02                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	T	TACAA	TAACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACAATAACGACTACTACTATTATGGTATGGACGTC	ARDYNNDYYYYGMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4492   1    GGTCCCTGAGACTCTCCTGTGCAGCATCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  95.6% (239/250)  IGHV3-48*03  47   .........................C...........................................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  D  S  G  S  T  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4492   91   AGTGGATTTCATACATTAGTGATAGCGGTAGTACCAAATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (239/250)  IGHV3-48*03  137  .....G..............AG...T..........T.....................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  K  L  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  D  Y  N  N  D  Y  Y  
                    Query_4492   181  AGAAGTTACTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTTCTGTGCGAGAGATTACAATAACGACTACTACT  270
V  95.6% (239/250)  IGHV3-48*03  227  ....C.C.........G........................................A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-1*01   3    -----------------------------------------------------------------------.....--------------  7
J  94.9% (56/59)    IGHJ6*02     4    ---------------------------------------------------------------------------------.........  12

                                      ---------------->                                 
                                      Y  Y  G  M  D  V  W  G  H  G  T  T  V  T  V  S  S 
                    Query_4492   271  ATTATGGTATGGACGTCTGGGGCCACGGGACCACGGTCACCGTCTCCTCA  320
J  94.9% (56/59)    IGHJ6*02     13   .C..C....................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_211836

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            353     9e-100
IGHD2-8*02                                                                                            19.9    0.15  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AAAGCGGGCTC	TACTGGTGGT	A	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAAAGCGGGCTCTACTGGTGGTAACTTTGACTAC	ARKAGSTGGNFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  I  F  T  H  Y  W  M  S  W  V  R  Q  A  P  G  K  W  L  
                    Query_4493  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTTACTCACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGTGGCTGG  90
V  95.6% (237/248)  IGHV3-7*03  47   ....................................CC....G.AG.....................................G......  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  D  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4493  91   AGTGGGTTGCCGACATAAAGCAGGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (237/248)  IGHV3-7*03  137  .......G...A..........A...................................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                     K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  K  A  G  S  T  G  G  
                    Query_4493  181  AGAACTCAGTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAAAAGCGGGCTCTACTGGTGGTA  270
V  95.6% (237/248)  IGHV3-7*03  227  ........C.G.........................................................----------------------  294
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD2-8*02  10   -------------------------------------------------------------------------------..........-  19

                                     ---------->                                  
                                     N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4493  271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (45/45)   IGHJ4*02    4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_211837

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTGTACGAGGCGACTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATGTGTACGAGGCGACTCATCAATATAGTGGCTACATGATTAATGACTAC	GKDVYEATHQYSGYMINDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4494   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAAGTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  E  S  G  A  S  T  N  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4494   91   AATGGGTCTCAGGTATCAGTGAGAGCGGTGCTAGCACAAATCACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-23*01  137  .G..........C...T....GT..T....G.......T.CT................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  I  S  L  T  V  E  D  T  A  V  Y  Y  C  G  K  D  V  Y  E  A  T  H  
                    Query_4494   181  AGAACACACTGTATCTGCAAATGATCAGCCTGACAGTCGAGGACACGGCCGTATATTATTGTGGGAAAGATGTGTACGAGGCGACTCATC  270
V  92.8% (232/250)  IGHV3-23*01  227  .......G................A........G..C.....................C....C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4494   271  AATATAGTGGCTACATGATTAATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_110704

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           397     8e-113
IGHD4-17*01                                                                                           18.0    0.68  
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAG	CTACGGTGA	GTCCGAGTAGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTATGGACGTC	ARDLATVSPSSFYYGMDV	289	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	75	69	66	3	0	95.7
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  S  S  Y 
                    Query_4495   7    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCGGTGAAGGTCTCCTGCAAGTCCTCTGGTTACACCTTTAGTAGTTAT  96
V  93.8% (272/290)  IGHV1-18*01  7    ............................................A..................G.T................CC..C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_4495   97   GGTATCACCTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  186
V  93.8% (272/290)  IGHV1-18*01  97   .......G.........A..............A................................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_4495   187  ATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  276
V  93.8% (272/290)  IGHV1-18*01  187  .A.C...A..G.................C....................C..........C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  S  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_4495   277  GTGTATTACTGTGCGAGAGATTTAGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACC  366
V  93.8% (272/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------.........--------------------------------------------------------  12
J  100.0% (52/52)   IGHJ6*02     11   -----------------------------------------------...........................................  53

                                               
                                       V  S  S 
                    Query_4495   367  GTCTCCTCA  375
J  100.0% (52/52)   IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_26801

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHD3-9*01                                                                                            12.2    31    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGA	ATATTT	CCCACGAGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGACGAATATTTCCCACGAGGCTTTCAGTAC	VRDEYFPRGFQY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4496   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGGCTACTGGATGCACTGGGTCCGCCAAGCACCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-74*01  47   ............................................A............................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  I  I  D  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4496   91   TGTGGGTCTCACGTATTAATAGTGATGGGAGTATCATAGACTCCGCGGATTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-74*01  137  .................................G..C.AG..A......C........................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  E  Y  F  P  R  G  
                    Query_4496   181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGTAAGAGACGAATATTTCCCACGAGGCT  270
V  96.0% (240/250)  IGHV3-74*01  227  .......G.......................................................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-9*01   9    -------------------------------------------------------------------------......-----------  14
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  Q  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4496   271  TTCAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  95.5% (42/44)    IGHJ4*02     7    ..G.C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_211838

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           363     1e-102
IGHD2-2*03                                                                                            12.2    33    
IGHJ5*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-2*03	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATTCCC	TGGATTTTG	GTTCCCCCTTAGATCAA	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATTCCCTGGATTTTGGTTCCCCCTTAGATCAAAACTGGTTCGACCCC	ARNSLDFGSPLDQNWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4497   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (240/248)  IGHV3-48*03  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  G  S  S  T  M  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4497   91   AGTGGGTTTCATACATCAGTAGTGGTTCTAGTACCATGTACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (240/248)  IGHV3-48*03  137  ................T......A..GG.........A....................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  N  S  L  D  F  G  S  
                    Query_4497   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTACTTCTGTGCGAGAAATTCCCTGGATTTTGGTTCCC  270
V  96.8% (240/248)  IGHV3-48*03  227  ............A..........................................T.A..........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD2-2*03   1    ---------------------------------------------------------------------------.....A...------  9

                                      IMGT--------------------->                                  
                                      P  L  D  Q  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4497   271  CCTTAGATCAAAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
J  100.0% (49/49)   IGHJ5*02     3    -----------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_110709

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           436     1e-124
IGHD4-17*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TC	CGGTGACTAC	GGAAACAGCTTACCGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCGGTGACTACGGAAACAGCTTACCGTCTGACTAC	ARSGDYGNSLPSDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y
                    Query_4498   1    GCAGCTGGTGCAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTA  90
V  98.3% (284/289)  IGHV3-33*01  6    ..........G...............................................................................  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  E  Y  Y  A  D
                    Query_4498   91   TGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATGAGTACTATGCAGA  180
V  98.3% (284/289)  IGHV3-33*01  96   ............................................................................A.A...........  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  R  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A
                    Query_4498   181  CTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGAACACGCTGTATCTGCAAATGAGCAGCCTGAGAGCCGAGGACACGGC  270
V  98.3% (284/289)  IGHV3-33*01  186  .........................................A.......................A........................  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                 
                                        V  Y  Y  C  A  R  S  G  D  Y  G  N  S  L  P  S  D  Y  W  G  Q  G  T  L  V  S  V  S  S 
                    Query_4498   271  TGTGTATTACTGTGCGAGATCCGGTGACTACGGAAACAGCTTACCGTCTGACTACTGGGGCCAGGGAACCCTGGTCAGCGTCTCCTCA  358
V  98.3% (284/289)  IGHV3-33*01  276  ...................---------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                      
D  100.0% (10/10)   IGHD4-17*01  7    ---------------------..........---------------------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02     8    ------------------------------------------------.............................C..........  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_161881

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           304     1e-84
IGHD2-8*02                                                                                            16.1    2.2  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGCATCGCAGAA	GGTGGTGT	GAAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGCATCGCAGAAGGTGGTGTGAATTGGTTCGACCCC	AKDGIAEGGVNWFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  Q  F  S  F  Y  A  M  N  W  I  R  Q  A  P  G  K  G  L  
                    Query_4499   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCAGTTTAGTTTCTATGCCATGAACTGGATCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  88.8% (222/250)  IGHV3-23*01  47   ...................................ACC.....CAG...........G....G..........................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  G  I  S  G  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  N  I  T  R  D  N  S  
                    Query_4499   91   AGTGGGTCTCAGGCATTAGTGGAAGTGGTGGTACCACTTACTACGCAGACTCCGTGAAGGGCCGCTTCAACATTACCAGAGACAATTCTG  180
V  88.8% (222/250)  IGHV3-23*01  137  ............CT........T..........G...A..........................G....C...CT.............CA  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      G  N  T  V  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  D  G  I  A  E  G  G  
                    Query_4499   181  GGAACACGGTGTTTCTTCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTGTACTATTGTGCGAAAGATGGCATCGCAGAAGGTGGTG  270
V  88.8% (222/250)  IGHV3-23*01  227  A.......C...A...G...................C...............A..T..C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD2-8*02   14   -----------------------------------------------------------------------------------.......  20

                                      ---------------->                                  
                                      V  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4499   271  TGAATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  321
D  100.0% (8/8)     IGHD2-8*02   21   .--------------------------------------------------  21
J  97.8% (45/46)    IGHJ5*02     6    -----.........................................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_161883

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     8e-121
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGACA	TGGGGATG	ATAGTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTC	A*HGDDSGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	281	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_4500   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAGGATCTCTTGTAAGGGTTCTGGATACAGCTTTACCACCTA  90
V  96.6% (281/291)  IGHV5-51*01  6    ..............................A...................A......C............................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  T  R  Y  S  P
                    Query_4500   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.6% (281/291)  IGHV5-51*01  96   ........G.................................................T...............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4500   181  GTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.6% (281/291)  IGHV5-51*01  186  .......C...................A.C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  *  H  G  D  D  S  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_4500   271  CATGTATTACTGTGCGTGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  96.6% (281/291)  IGHV5-51*01  276  ................A....---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------........A.....-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------.......AC.....T.............................  49

                                                   
                                        T  V  S  S 
                    Query_4500   361  CACCGTCTCCTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_161882

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           363     1e-102
IGHD3-10*01                                                                                           10.3    123   
IGHJ2*01                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CG	GGTTC	CATCTGTCCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGACGGGTTCCATCTGTCCCCCTACTGGTACTTCGATCTC	ARDGFHLSPYWYFDL	249	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	256	8	5	3	0	62.5
Total	N/A	N/A	256	244	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4501   1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCACCTTTGGTGATTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  95.3% (244/256)  IGHV3-49*04  47   .........................T..........................T................................G....  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  T  Y  G  G  T  A  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_4501   91   AGTGGGTAGGTTTCATTAGAAGCAAGACTTATGGTGGGACAGCAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  95.3% (244/256)  IGHV3-49*04  137  .........................AG..............A................................................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------------CDR3
                                      D  S  K  S  I  A  F  L  R  M  D  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  D  G  F  H  L  
                    Query_4501   181  ATTCCAAAAGCATCGCCTTTCTGCGAATGGACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTGCCAGGGACGGGTTCCATCTGT  270
V  95.3% (244/256)  IGHV3-49*04  227  ..................A.....A....A......................................A.T..A..--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (5/5)     IGHD3-10*01  11   ------------------------------------------------------------------------------.....-------  15

                                      -IMGT----------------->                                  
                                      S  P  Y  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_4501   271  CCCCCTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCCTCAG  327
J  98.1% (52/53)    IGHJ2*01     1    ----........................................A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_249891

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            347     7e-98
IGHD1-20*01                                                                                           12.2    33   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTAAACCGGGATCGTC	GTATAA	AGGGTACG	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAAACCGGGATCGTCGTATAAAGGGTACGACTGCTTTGACCAC	ARLKPGSSYKGYDCFDH	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  I  H  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4502   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGGGATCCATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-7*01   47   .........................................A.T.G.T.........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  T  F  Y  V  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4502   91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGAGACATTCTATGTGGACTCTTTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (235/248)  IGHV3-7*01   137  ....................C...............A..A.............G....................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  L  K  P  G  S  S  Y  
                    Query_4502   181  AGAATTCACTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTATATTACTGTGCGAGACTTAAACCGGGATCGTCGTATA  270
V  94.8% (235/248)  IGHV3-7*01   227  ....C.....G.......................................G.G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-20*01  2    -------------------------------------------------------------------------------------.....  6

                                      GT-------------------->                                
                                      K  G  Y  D  C  F  D  H  W  G  P  G  T  L  V  T  V  S  S
                    Query_4502   271  AAGGGTACGACTGCTTTGACCACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTC  325
D  100.0% (6/6)     IGHD1-20*01  7    .------------------------------------------------------  7
J  93.5% (43/46)    IGHJ4*02     1    ---------...A.......T.........A........................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_249890

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     2e-87
IGHD4-4*01                                                                                            21.8    0.042
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-4*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAGGCGGGG	GACTACAGTAA	TTGGGGGGGGCTGGACTACCCAGACC	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAGGCGGGGGACTACAGTAATTGGGGGGGGCTGGACTACCCAGACCACGGTATGGACGTC	AKDKAGDYSNWGGLDYPDHGMDV	230	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	46	5	0	90.2
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	114	0	0	100
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	212	12	0	94.6


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  V  T  L  T  T  Y  A  M  S  W  V  R  L  G  P  G  K  R  L  E  W  V  S  G  I  S  G  N 
                    Query_4503   14   TCTGGAGTCACTCTTACCACCTATGCCATGAGCTGGGTCCGCCTGGGTCCAGGGAAGCGGCTGGAATGGGTCTCAGGTATTAGTGGTAAT  103
V  94.6% (212/224)  IGHV3-23*01  73   ......T....CT...G..G.......................A..C..........G.......G..........C...........G.  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  V  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 
                    Query_4503   104  GGTGTTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAAC  193
V  94.6% (212/224)  IGHV3-23*01  163  ....G.....................................................................................  252
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><-----------------------------CDR3-IMGT---------------
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  K  A  G  D  Y  S  N  W  G  G  L  D  Y  P  D 
                    Query_4503   194  AGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATAAGGCGGGGGACTACAGTAATTGGGGGGGGCTGGACTACCCAGAC  283
V  94.6% (212/224)  IGHV3-23*01  253  ............................................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  100.0% (11/11)   IGHD4-4*01   2    ------------------------------------------------------...........-------------------------  12

                                      -------------->                                 
                                       H  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4503   284  CACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  331
J  100.0% (47/47)   IGHJ6*02     16   -...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_249893

Length=413
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           364     6e-103
IGHD3-10*01                                                                                           23.8    0.013 
IGHJ6*02                                                                                              73.7    3e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-10*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	GGGAGCTTGAC	TTACTGTTGTTGGGGGGGTTATTA	CCCGTCC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGAGGGGAGCTTGACTTACTGTTGTTGGGGGGGTTATTACCCGTCCACTTCTACTTCGCTATTGACATC	A*GELDLLLLGGLLPVHFYFAIDI	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	289	261	28	0	90.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  G  S  C  K  A  S  G  Y  T  F  S  T  H 
                    Query_4504   2    CAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGGCTCCTGCAAGGCTTCTGGTTACACCTTTTCCACTCAC  91
V  90.3% (261/289)  IGHV1-18*04  7    ........G...........................................T............................A...GCT..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  K  K  S  I  T  K  Y  A  Q 
                    Query_4504   92   GGTATTAGCTGGGTGCGACAGGCACCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGCTAAGAAAAGTATCACAAAGTATGCACAG  181
V  90.3% (261/289)  IGHV1-18*04  97   .....C.................C...........G...........................T.C..TG...A......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  R  D  R  V  T  M  T  T  D  T  S  T  T  T  V  Y  I  E  L  R  G  L  R  S  D  D  A  A 
                    Query_4504   182  AAGTTCCGAGACAGAGTCACCATGACCACAGACACATCCACGACCACAGTCTACATTGAACTGAGGGGCCTAAGGTCTGACGACGCGGCC  271
V  90.3% (261/289)  IGHV1-18*04  187  ...C...AG.G................................G.....C......G..G......A....G..A.........A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------------CDR3-IMGT------------------------------>      
                                       V  Y  Y  C  A  *  G  E  L  D  L  L  L  L  G  G  L  L  P  V  H  F  Y  F  A  I  D  I  W  G 
                    Query_4504   272  GTGTATTACTGTGCGTGAGGGGAGCTTGACTTACTGTTGTTGGGGGGGTTATTACCCGTCCACTTCTACTTCGCTATTGACATCTGGGGC  361
V  90.3% (261/289)  IGHV1-18*04  277  ...............A...-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  83.3% (20/24)    IGHD3-10*01  4    ------------------------------.....A.G...C....A.......------------------------------------  27
J  89.3% (50/56)    IGHJ6*02     7    -------------------------------------------------------------...A.....A..G...G...G........  35

                                                                 
                                       Q  G  T  T  V  S  V  S  S 
                    Query_4504   362  CAAGGGACCACGGTCTCCGTCTCCTCA  388
J  89.3% (50/56)    IGHJ6*02     36   ...............A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40498920


Query= Query_249892

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           343     2e-96
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CATGCTTTCCTCGACTGATATGT	CGTTCGGGGGA	TTTTTGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACATGCTTTCCTCGACTGATATGTCGTTCGGGGGATTTTTGATTGACCAG	ARDMLSSTDMSFGGFLIDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  S  S  R  S  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_4505   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGACTCCATCAGCAGTAGAAGTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGG  90
V  93.6% (235/251)  IGHV4-39*02  49   ...................C...........G...............T...........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  E  S  R  V  A  I  S  I  D  T  S 
                    Query_4505   91   CTGGAATGGATTGGGAATATCTATTATAGTGGGAGCACCGACTACAACCCGTCCCTCGAGAGTCGAGTCGCCATATCGATAGACACGTCC  180
V  93.6% (235/251)  IGHV4-39*02  139  .....G..........G......................T.................A...........A.......CG...........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  M  L  S  S  T  D 
                    Query_4505   181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACCGCCGCAGACACGGCTATTTATTACTGTGCGAGAGACATGCTTTCCTCGACTGAT  270
V  93.6% (235/251)  IGHV4-39*02  229  ........C............C....C........................G.G.................-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       M  S  F  G  G  F  L  I  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4505   271  ATGTCGTTCGGGGGATTTTTGATTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  90.9% (10/11)    IGHD3-16*01  13   ----....T......-------------------------------------------------  23
J  95.2% (40/42)    IGHJ4*02     7    ----------------------.....T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_249895

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	ATTTCTTAGGG	GCTCGTC	AGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACATTTCTTAGGGGCTCGTCAGGCTTTCACTAC	TFLRGSSGFHY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	101	13	0	88.6
CDR3-IMGT (germline)	249	250	2	2	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  D  L  D  W  V  R  Q  A  S  G  K  G  L  
                    Query_4506   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGATTTGGACTGGGTCCGCCAGGCTTCCGGGAAAGGCCTGG  90
V  90.8% (227/250)  IGHV3-73*01  47   .........A.........................................C.A..C............................G....  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  M  R  T  K  D  D  N  Y  A  T  L  Y  A  A  S  V  R  G  R  F  T  I  S  R  D  
                    Query_4506   91   AGTGGGTTGGCCGTATGAGAACCAAAGATGACAATTACGCGACACTATATGCTGCGTCGGTGAGAGGCAGGTTCACCATCTCCAGAGATG  180
V  90.8% (227/250)  IGHV3-73*01  137  ................T....G.....C.A...G..........GC.................A..........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  N  M  A  Y  L  Q  M  S  G  L  D  T  E  D  T  A  L  Y  F  C  T  F  L  R  G  S  S  
                    Query_4506   181  ATTCAAAGAACATGGCTTATCTGCAAATGAGCGGCCTGGACACCGAGGACACGGCCCTTTACTTCTGTACATTTCTTAGGGGCTCGTCAG  270
V  90.8% (227/250)  IGHV3-73*01  227  ............C...G.............A.A.....A.A...............G.G..T.A......--------------------  296
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------.......--  17

                                      ---------->                                  
                                      G  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4506   271  GCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (43/44)    IGHJ4*02     5    -....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_249897

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           311     4e-87
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CGTACTGG	ATTACGATGTTTTGAGTGGTTAT	CC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCGTACTGGATTACGATGTTTTGAGTGGTTATCCCTACTTTGACTAC	AVLDYDVLSGYPYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	245	2	2	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  T  S  S  T  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_4507   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCACCAGCAGTACTTACTACTGGGCCTGGATCCGCCAGCCCCCCGGGAAGGGC  90
V  90.6% (222/245)  IGHV4-39*01  49   ...............................G........G...T....G...........G..................A........G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  S  G  G  S  T  Y  Y  N  P  S  L  E  S  R  I  P  V  S  I  A  T  S 
                    Query_4507   91   CTGGAGTGGATTGGGAGTATCTATTCTGGGGGGAGCACCTACTACAACCCGTCCCTCGAGAGTCGCATCCCCGTTTCCATAGCCACGTCG  180
V  90.6% (222/245)  IGHV4-39*01  139  .........................A.A.T...........................A.......AG..A..A.A...G...A......C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       R  N  Q  F  S  R  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  V  L  D  Y  D  V  L  S 
                    Query_4507   181  AGGAACCAGTTCTCCCGGAAGCTGACCTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGCCGTACTGGATTACGATGTTTTGAGT  270
V  90.6% (222/245)  IGHV4-39*01  229  .A..............T........G...........................G...........-------------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  91.3% (21/23)    IGHD3-3*01   3    -------------------------------------------------------------------------........T...G....  19

                                      GT------------------>                                  
                                       G  Y  P  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4507   271  GGTTATCCCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  91.3% (21/23)    IGHD3-3*01   20   ......-------------------------------------------------  25
J  100.0% (47/47)   IGHJ4*02     2    --------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_160759

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*04                                                                                           296     2e-82
IGHD2-21*01                                                                                           10.3    125  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*04	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATAAAGACCCCGGAGGGCGC	CTATT	TCTCG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATAAAGACCCCGGAGGGCGCCTATTTCTCGTACTACGGTATGGACGTC	ARIKTPEGAYFSYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	218	29	0	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  I  A  S  G  F  T  F  S  D  F  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4508   1    GGTCCCTGAGACTCTCCTGTATAGCCTCTGGATTCACCTTCAGTGATTTTACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGC  90
V  88.3% (218/247)  IGHV3-21*04  47   ....................GC......................AGC.A..G.................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  S  S  G  T  Y  T  Y  Y  A  D  S  L  Q  G  R  F  T  I  A  R  D  N  A  
                    Query_4508   91   AGTGGGTGTCATCCATTAGTAGTAGTGGGACTTACACATACTACGCAGACTCACTTCAGGGCCGATTCACCATCGCCAGAGACAACGCCA  180
V  88.3% (218/247)  IGHV3-21*04  137  .......C..................A.T.G.....T................G.GA.................T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  R  S  L  Y  L  Q  V  N  S  L  R  T  E  D  T  G  I  Y  Y  C  A  R  I  K  T  P  E  G  A  
                    Query_4508   181  AGAGGTCTCTGTATCTCCAAGTGAACAGCCTGAGAACCGAGGACACCGGCATATATTATTGTGCGAGGATAAAGACCCCGGAGGGCGCCT  270
V  88.3% (218/247)  IGHV3-21*04  227  ...AC..A........G...A..............G..........G.C.G.G.....C........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  22   ----------------------------------------------------------------------------------------..  23

                                      IMGT--------------------->                              
                                      Y  F  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_4508   271  ATTTCTCGTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  326
D  100.0% (5/5)     IGHD2-21*01  24   ...-----------------------------------------------------  26
J  100.0% (48/48)   IGHJ6*02     12   --------................................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_160756

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           322     2e-90
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4509   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_4509   91   CTAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-61*08  139  ..G..................T..T................C.................G.......TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N 
                    Query_4509   181  AGGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTTTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAAC  270
V  91.2% (228/250)  IGHV4-61*08  229  .A.................A.....GC..........................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G..G.....G.  22

                                      3-IMGT----------------------->                                  
                                       C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4509   271  TGCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  86.4% (19/22)    IGHD2-15*01  23   ......----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_249898

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           315     5e-88
IGHD2-15*01                                                                                           10.3    119  
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	CCCGCGTTGC	GGTAG	A	TGATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGCCCGCGTTGCGGTAGATGATTCTTTTGATCTC	ARARVAVDDSFDL	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	225	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  S  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4510   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACTAGTCACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  90.4% (225/249)  IGHV3-74*01  47   ..........................................G...CT..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  N  D  G  S  L  T  H  Y  A  D  S  V  R  G  R  V  T  F  S  R  D  N  T  
                    Query_4510   91   TGTGGGTCTCACGTATTAATAATGATGGGAGTCTCACACACTATGCGGACTCCGTCAGGGGCCGAGTCACCTTCTCCAGAGACAACACCA  180
V  90.4% (225/249)  IGHV3-74*01  137  .....................G..........AG....AG...C...........G.A.......T.....A..............G...  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  G  T  L  Y  L  Q  M  T  S  L  R  A  D  D  T  A  V  Y  F  C  A  R  A  R  V  A  V  D  D  
                    Query_4510   181  AGGGAACACTGTATCTGCAGATGACCAGTCTGAGAGCCGACGACACGGCTGTCTATTTCTGTGCCAGAGCCCGCGTTGCGGTAGATGATT  270
V  90.4% (225/249)  IGHV3-74*01  227  ..AAC..G...........A....A...............G...........G....A......A....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-15*01  17   -------------------------------------------------------------------------------.....------  21
J  92.0% (46/50)    IGHJ3*01     1    -------------------------------------------------------------------------------------....G  5

                                      ---------->                                  
                                      S  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4510   271  CTTTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCCTCAG  315
J  92.0% (46/50)    IGHJ3*01     6    ........G.................A.............T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_160754

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           272     2e-75
IGHD3-10*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGGACATGTTAG	GGTTCGGGGA	CTTGGTTCCCCTTGCCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACATGTTAGGGTTCGGGGACTTGGTTCCCCTTGCCCAC	ARDMLGFGDLVPLAH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	210	36	0	85.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  S  Y  A  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4511   1    GGTCCCTGAGACTCTCCTGTGCGGTCTCTGGATTCACCTTTTCCAGTTATGCCATCTCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  85.4% (210/246)  IGHV3-23*01  47   ......................A.C................AG...C........GAG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  G  D  S  A  A  K  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_4511   91   AGTGGGTCTCTGGCATCGGTGACAGTGCTGCCAAGACATATTACGCAGACTCCGTGAGGGGCCGCTTCACCATCTCCAGAGACAATTCCA  180
V  85.4% (210/246)  IGHV3-23*01  137  ..........A.CT..TA...GT....G..GT.GC.....C................A......G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  M  T  V  Y  L  Q  M  N  S  L  R  P  E  D  T  G  M  Y  F  C  A  R  D  M  L  G  F  G  D  
                    Query_4511   181  GAATGACAGTATATCTGCAAATGAACAGTCTGAGACCCGAGGACACGGGCATGTATTTCTGTGCGAGGGACATGTTAGGGTTCGGGGACT  270
V  85.4% (210/246)  IGHV3-23*01  227  AG.AC..GC.G.................C......G............C.G.A....A........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD3-10*01  11   ------------------------------------------------------------------------------..........--  20

                                      ---------------->                                  
                                      L  V  P  L  A  H  W  G  Q  G  V  L  V  S  V  S  S  
                    Query_4511   271  TGGTTCCCCTTGCCCACTGGGGCCAGGGAGTCCTGGTCAGCGTCTCCTCAG  321
J  91.7% (33/36)    IGHJ4*02     13   ---------------..............AC........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_160755

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4512   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_4512   91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_4512   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  95.5% (231/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4512   271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_160752

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4513   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_4513   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_4513   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4513   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_160753

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           299     3e-83
IGHD1-26*01                                                                                           12.2    35   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTCTGGATCTCT	TGGGAG	GCGACAC	TGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCTGGATCTCTTGGGAGGCGACACTGACGAC	ATLDLLGGDTDD	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	43	8	0	84.3
CDR2-IMGT	146	169	24	16	8	0	66.7
FR3-IMGT	170	283	114	94	20	0	82.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	239	48	0	83.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  A  G  S  T  V  K  V  S  C  K  T  S  R  A  T  F  S  S  N
                    Query_4514   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGGCTGGGTCCACGGTGAAGGTCTCCTGCAAGACTTCCAGGGCCACCTTCAGCAGCAA  90
V  83.3% (239/287)  IGHV1-69*06  6    ..................G...............C........T....................G....TG.A.G.............T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        T  F  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  A  I  I  P  T  L  R  T  T  N  Y  A  Q
                    Query_4514   91   CACCTTCACTTGGGTGCGCCAGGCCCCGGGACAAGGGCTTGAGTGGATGGGGGCCATCATCCCCACCCTGCGCACGACAAACTACGCACA  180
V  83.3% (239/287)  IGHV1-69*06  96   TG.TA...GC........A........T.......................A.GG........T.T.T.TG.T..AG.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  R  S  S  S  T  S  Y  M  G  L  S  G  L  T  P  E  D  T  A
                    Query_4514   181  GAGGTTCCAAGGCAGAGTCACCATAACCGCGGACAGGTCTTCGAGTACAAGTTATATGGGACTGAGCGGTCTGACTCCTGAGGACACGGC  270
V  83.3% (239/287)  IGHV1-69*06  186  ..A......G...........G..T..........AA..CA....C...GCC..C....AG......A.C....GAT.............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  T  L  D  L  L  G  G  D  T  D  D  W  G  P  G  T  L  V  T  V  S  S  
                    Query_4514   271  CGTGTATTACTGTGCGACTCTGGATCTCTTGGGAGGCGACACTGACGACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  353
V  83.3% (239/287)  IGHV1-69*06  276  .................------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                    
D  100.0% (6/6)     IGHD1-26*01  8    -----------------------------......------------------------------------------------  13
J  95.1% (39/41)    IGHJ4*02     8    ------------------------------------------....T.........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_160750

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         388     4e-110
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ATGGGCGCAGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGCGCAGATGATGCTTTTGATATC	ARMGADDAFDI	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	248	0	0	100


Alignments

                                         <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                            S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                     Query_4515     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  100.0% (248/248)  IGHV3-30-3*01  47   ..........................................................................................  136
                                            S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                         -------------><-------CDR2-IMGT------><---------------------------------------------------
                                         E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                     Query_4515     91   AGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  100.0% (248/248)  IGHV3-30-3*01  137  ..........................................................................................  226
                                         E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                         -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                         K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  M  G  A  D  D  A  F  
                     Query_4515     181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAATGGGCGCAGATGATGCTTTTG  270
V  100.0% (248/248)  IGHV3-30-3*01  227  ....................................................................----------------------  294
                                         K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  98.0% (49/50)     IGHJ3*02       1    -------------------------------------------------------------------------------...........  11

                                         ---->                                  
                                         D  I  W  G  Q  G  T  M  V  T  V  P  S  
                     Query_4515     271  ATATCTGGGGCCAAGGGACAATGGTCACCGTCCCTTCAG  309
J  98.0% (49/50)     IGHJ3*02       12   ................................T......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_160751

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           392     2e-111
IGHD3-9*01                                                                                            12.2    35    
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-9*01	IGHJ4*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	TATCCTCATGCCCCG	CGATAT	ATCAAGGACCTTCT	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	268	17	0	94


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  M  V  S  C  E  A  S  G  G  S  F  N  T  Y
                    Query_4516   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGATGGTCTCCTGCGAGGCTTCTGGAGGCTCCTTCAACACCTA  90
V  94.0% (268/285)  IGHV1-69*01  6    ..................G...............................A..........A..............A......G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  M  F  G  T  A  K  Y  A  Q
                    Query_4516   91   TGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGCCTTGAGTGGATGGGAGGGATCATCCCTATGTTTGGTACAGCAAAGTACGCACA  180
V  94.0% (268/285)  IGHV1-69*01  96   ........G...........................G.............................C..............C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  V  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_4516   181  GAAATTTCAGGGAAGAGTCACGGTTACCGCGGACGAATCCACGAGCACTGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  94.0% (268/285)  IGHV1-69*01  186  ...G..C.....C.........A.........................A.........................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------>                                                                     
                                        V  Y  F  C  A  I  L  M  P  R  D  I  S  R  T  F  W  A  R  E  P  W  S  P  S  P  Q 
                    Query_4516   271  CGTCTATTTCTGTGCTATCCTCATGCCCCGCGATATATCAAGGACCTTCTGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  352
V  94.0% (268/285)  IGHV1-69*01  276  ...G....A......-------------------------------------------------------------------  290
                                        V  Y  Y  C  A                                                                   
D  100.0% (6/6)     IGHD3-9*01   7    ------------------------------......----------------------------------------------  12
J  100.0% (32/32)   IGHJ4*02     17   --------------------------------------------------................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_168568

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*05                                                                                         291     5e-81
IGHD3-10*01                                                                                           12.2    31   
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*05	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	TGGTTC	TACGTGGCG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGTGGTTCTACGTGGCGACAACTGGTTCGACCTC	VRVVLRGDNWFDL	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  D  S  I  T  R  G  G  Y  S  W  S  W  I  R  Q  S  P  G  K  G 
                    Query_4517     1    ACCCTGTCCCTCACCTGCGCTGTGTCCGGTGACTCCATCACCAGGGGTGGTTACTCCTGGAGTTGGATCCGCCAGTCCCCAGGGAAGGGC  90
V  87.2% (218/250)  IGHV4-30-2*05  49   .......................C..T....G........G...T.................C........G...C.A............  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  A  N  I  Y  Y  S  G  K  T  N  F  N  P  S  L  K  S  R  L  T  T  S  L  D  A  S 
                    Query_4517     91   CTGGAGTGGATTGCGAACATCTATTATAGTGGGAAGACCAACTTCAATCCGTCCCTCAAGAGTCGACTTACCACATCACTAGACGCGTCC  180
V  87.2% (218/250)  IGHV4-30-2*05  139  .............G.T........C.........GC...T...A...C..................G......T....G.....A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         E  N  Q  F  S  L  K  L  M  S  M  T  A  A  D  T  A  V  Y  Y  C  V  R  V  V  L  R  G  D  N 
                    Query_4517     181  GAGAACCAATTCTCTCTGAAACTTATGTCGATGACTGCCGCAGACACGGCCGTTTATTACTGTGTCAGAGTGGTTCTACGTGGCGACAAC  270
V  87.2% (218/250)  IGHV4-30-2*05  229  A.......G.....C.....G..G.GC..TG......................G..........C.....--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01    10   ----------------------------------------------------------------------......--------------  15
J  96.1% (49/51)    IGHJ5*02       1    -------------------------------------------------------------------------------------.....  5

                                        ----------->                                  
                                         W  F  D  L  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_4517     271  TGGTTCGACCTCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  316
J  96.1% (49/51)    IGHJ5*02       6    ..........C.................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_240044

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD3-3*01                                                                                            29.5    2e-04
IGHJ2*01                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGTGGGGTTCAGAGCGA	ATTACGATTTTTGGA	ATCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGTGGGGTTCAGAGCGAATTACGATTTTTGGAATCCCTACTGGTACTTCGATTTC	ARGVGFRANYDFWNPYWYFDF	240	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  C  Q  P  P  G  K  G  L  E  
                    Query_4518   4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTATTACTGGAGCTGGATTTGTCAGCCCCCAGGGAAGGGACTGGAGT  93
V  91.8% (224/244)  IGHV4-34*01  50   .....TCC...A..................................C..............CC.C.................G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  A  I  K  Y  S  G  N  T  N  H  N  P  S  L  K  S  R  V  T  L  S  V  D  T  S  K  N  
                    Query_4518   94   GGATTGGGGCAATTAAGTACAGCGGAAACACCAACCACAATCCGTCCCTCAAGAGTCGAGTCACCCTATCAGTGGACACGTCCAAGAACC  183
V  91.8% (224/244)  IGHV4-34*01  140  .........A...C..TC.T..T....G.......T....C........................A.......A................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------------CDR3-IM
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  F  R  A  N  Y  D  
                    Query_4518   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCGTGGGGTTCAGAGCGAATTACGATT  273
V  91.8% (224/244)  IGHV4-34*01  230  ................................................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  100.0% (15/15)   IGHD3-3*01   3    ---------------------------------------------------------------------------------.........  11

                                      GT-------------------------->                                  
                                      F  W  N  P  Y  W  Y  F  D  F  W  G  R  G  T  L  V  I  V  S  S  
                    Query_4518   274  TTTGGAATCCCTACTGGTACTTCGATTTCTGGGGCCGTGGTACCCTGGTCATTGTCTCCTCAG  336
D  100.0% (15/15)   IGHD3-3*01   12   ......---------------------------------------------------------  17
J  94.3% (50/53)    IGHJ2*01     1    ----------................C.............C..........C...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_168561

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD1-1*01                                                                                            18.0    0.59 
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCAGTG	GGTACAACT	TTGGGAAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGGTACAACTTTGGGAATAACTGGTTCGACCCG	ARDPTGSGYNFGNNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  H  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4519   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGTCATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...............................G..........AG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  K  G  G  I  T  N  H  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_4519   91   TGGATTGGATATGTCTATAAGGGCGGGATCACCAACCACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G...A.....T.CA.T....G.......T...................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  H  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_4519   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCTGACACGGCCATATATCACTGTGCGAGAGATCCTACCGGCAGTGGGTACAACTTT  270
V  93.5% (229/245)  IGHV4-59*01  229  ...................................G.........G.G...T.............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD1-1*01   1    -------------------------------------------------------------------------------.........--  9

                                      -------------------->                                  
                                       G  N  N  W  F  D  P  W  G  P  G  T  L  V  T  V  S  S  
                    Query_4519   271  GGGAATAACTGGTTCGACCCGTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  325
J  95.9% (47/49)    IGHJ5*02     3    ------..............C.......A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_168560

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           399     3e-113
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ3*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGATGGA	ATTACTAT	CAAACGAAGCA	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCGATGGAATTACTATCAAACGAAGCAATGGTTTTGATATA	TRGDGITIKRSNGFDI	281	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	166	21	19	2	0	90.5
FR3-IMGT	167	280	114	109	5	0	95.6
CDR3-IMGT (germline)	281	287	7	6	1	0	85.7
Total	N/A	N/A	287	271	16	0	94.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  D  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S
                    Query_4520   1    GCAGCTGGTGCAGTCTGGAGGAGACTTGATCCAGCCGGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAG  90
V  94.4% (271/287)  IGHV3-53*01  6    ..........G............G............T....................................................A  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  A  W  V  R  Q  A  P  G  R  G  L  E  W  V  S  V  I  Y  S  G  G  T  T  Y  F  A  D  S
                    Query_4520   91   CTACATGGCTTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGGAGTGGGTCTCAGTTATTTACAGCGGTGGTACCACATACTTCGCAGACTC  180
V  94.4% (271/287)  IGHV3-53*01  96   .......AGC......................A...........................T..........G........A.........  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  L
                    Query_4520   181  CGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGCACAGCCTGAGAGCCGACGACACGGCCCT  270
V  94.4% (271/287)  IGHV3-53*01  186  .............................................................A................G.........G.  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><-------------------CDR3-IMGT------------------>                                
                                        Y  Y  C  T  R  G  D  G  I  T  I  K  R  S  N  G  F  D  I  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4520   271  GTACTACTGTACGAGAGGCGATGGAATTACTATCAAACGAAGCAATGGTTTTGATATATGGGGCCAAGGGACACTGGTCACCGTCTCTTC  360
V  94.4% (271/287)  IGHV3-53*01  276  ...T......G......-------------------------------------------------------------------------  292
                                        Y  Y  C  A  R                                                                           
D  100.0% (8/8)     IGHD3-10*01  3    -------------------------........---------------------------------------------------------  10
J  93.8% (45/48)    IGHJ3*02     3    --------------------------------------------...C.........C...............A................  48

                                        
                                        
                    Query_4520   361  AG  362
J  93.8% (45/48)    IGHJ3*02     49   ..  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_168565

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           302     3e-84
IGHD2-15*01                                                                                           31.5    5e-05
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGAGTTC	TTGTACTGGTGGTAGGTGCTAC	ATGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGAGTTCTTGTACTGGTGGTAGGTGCTACATGTTCTACTACTACGCTGTGGACGTC	AGSSCTGGRCYMFYYYAVDV	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	242	3	3	0	0	100
Total	N/A	N/A	239	216	23	0	90.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  G  T  Y  Y  W  S  W  I  R  Q  S  P  E  K  G  L  E  
                    Query_4521   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCGGTACTTACTACTGGAGTTGGATCCGGCAGTCCCCAGAGAAGGGACTGGAGT  93
V  90.4% (216/239)  IGHV4-59*08  50   .....TCC...A....C.....................A...G............C............C......G..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  Y  V  Y  Y  T  G  Y  T  D  Y  S  P  S  P  K  S  R  V  T  I  S  L  D  T  S  K  N  
                    Query_4521   94   GGCTAGGATATGTCTATTACACTGGGTACACCGACTACAGCCCCTCCCCCAAGAGTCGAGTCACCATTTCACTAGACACGTCCAAGAACC  183
V  90.4% (216/239)  IGHV4-59*08  140  ..A.T..G...A.........G....AG....A......A........T..................A...G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  C  T  G  G  R  C  Y  
                    Query_4521   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGGGGAGTTCTTGTACTGGTGGTAGGTGCTACA  273
V  90.4% (216/239)  IGHV4-59*08  230  ...........................................C...............-------------------------------  288
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  90.9% (20/22)    IGHD2-15*01  7    -------------------------------------------------------------------.....G.........C......-  28

                                      T------------------------>                                 
                                      M  F  Y  Y  Y  A  V  D  V  W  G  Q  G  T  T  I  T  V  S  S 
                    Query_4521   274  TGTTCTACTACTACGCTGTGGACGTCTGGGGCCAAGGGACCACGATCACCGTCTCCTCA  332
J  94.5% (52/55)    IGHJ6*02     8    ----...........G.A..........................G..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_168564

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           329     3e-92
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATGG	GGTTCGAGGA	CACTCGACCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTTCGAGGACACTCGACCGTTTTTGATATC	ARDGVRGHSTVFDI	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	226	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  S  N  S  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_4522   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAATAGTAACTCTTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.4% (226/242)  IGHV4-59*08  50   .....TCC...A....C......................G....T...AC........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N  
                    Query_4522   94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTATAATCCCTCCCTTAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAACC  183
V  93.4% (226/242)  IGHV4-59*08  140  .....................................C..C........C.....................G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  V  R  G  H  S  T  V  
                    Query_4522   184  AGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGATGGGGTTCGAGGACACTCGACCGTTT  273
V  93.4% (226/242)  IGHV4-59*08  230  ...................C........C.......................C.........----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  90.0% (9/10)     IGHD3-10*01  11   -------------------------------------------------------------------......G...-------------  20
J  93.2% (41/44)    IGHJ3*02     7    ----------------------------------------------------------------------------------------..  8

                                      ------->                                  
                                      F  D  I  W  G  Q  G  T  T  I  I  V  S  S  
                    Query_4522   274  TTGATATCTGGGGCCAAGGGACAACGATCATCGTCTCTTCAG  315
J  93.2% (41/44)    IGHJ3*02     9    ........................T.G...C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_168567

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            297     7e-83
IGHD1-26*01                                                                                           10.3    118  
IGHJ6*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACTTTCGCTTCGC	ACTAC	CTACATT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACTTTCGCTTCGCACTACCTACATTTGGACGTC	ARTFASHYLHLDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	218	28	0	88.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T  T  N  Q  W  W  T  W  V  R  Q  P  P  G  G  G  L 
                    Query_4523   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCACTAATCAGTGGTGGACTTGGGTCCGCCAGCCCCCAGGGGGGGGGCTG  90
V  88.6% (218/246)  IGHV4-4*01   49   ........................................G..G..G.A.C.......G......................AA.......  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  F  P  N  G  N  T  N  Y  S  P  S  L  K  S  R  L  T  I  S  M  A  K  S  K 
                    Query_4523   91   GAGTGGATTGGTGAAATTTTTCCTAATGGAAACACCAACTACAGCCCGTCCCTCAAGAGTCGACTCACCATTTCAATGGCTAAGTCCAAG  180
V  88.6% (218/246)  IGHV4-4*01   139  ...........G.....C.A..A..G...G.G...........A...................G.......A...G.A.AC.........  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  V  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  T  F  A  S  H  Y  L  H 
                    Query_4523   181  AACCAGGTCTCCCTGAAACTTAACTCTGTGACGGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAACTTTCGCTTCGCACTACCTACAT  270
V  88.6% (218/246)  IGHV4-4*01   229  ......T..........G..G.G.........C......................G..........------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (5/5)     IGHD1-26*01  16   -------------------------------------------------------------------------------.....------  20

                                      -------->                              
                                       L  D  V  W  G  Q  G  A  T  V  S  V  S 
                    Query_4523   271  TTGGACGTCTGGGGCCAAGGGGCCACGGTCAGCGTCTCC  309
J  94.7% (36/38)    IGHJ6*02     22   -....................A.........C.......  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_168566

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD3-22*01                                                                                           16.1    2.3   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCAC	ARAPPFDYDLDVRGIHNFDH	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	236	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4524   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (236/244)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_4524   91   TGGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAGC  180
V  96.7% (236/244)  IGHV4-59*01  139  ..........A.................G.............................................A.............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D 
                    Query_4524   181  CAGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGAC  270
V  96.7% (236/244)  IGHV4-59*01  229  ..................AG...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-22*01  6    ----------------------------------------------------------------------------........------  13

                                      GT------------------------>                                  
                                       V  R  G  I  H  N  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4524   271  GTAAGGGGAATCCACAACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  97.8% (44/45)    IGHJ4*02     4    ----------------........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_221804

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-72*01                                                                                           350     8e-99
IGHD2-21*02                                                                                           12.2    32   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-72*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGGA	A	GTGGTAACT	CCCGCACGGGAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTGGAAGTGGTAACTCCCGCACGGGAATTGACTAC	VGSGNSRTGIDY	249	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	105	9	0	92.1
CDR3-IMGT (germline)	249	254	6	4	2	0	66.7
Total	N/A	N/A	254	239	15	0	94.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_4525   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTCAGTGACCACTACATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.1% (239/254)  IGHV3-72*01  47   ........................C.................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  S  R  D  K  A  N  G  Y  T  T  E  Y  A  A  S  V  K  G  R  F  I  I  S  R  D  
                    Query_4525   91   AGTGGGTTGGCCGTAGTAGAGACAAAGCTAACGGTTACACCACAGAGTACGCCGCGTCTGTGAAAGGCAGATTCATTATCTCAAGAGATG  180
V  94.1% (239/254)  IGHV3-72*01  137  ...............C....A...........A.............A............................CC.............  226
                                      E  W  V  G  R  T  R  N  K  A  N  S  Y  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------CDR3-IMG
                                      D  S  K  S  S  L  H  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  V  G  S  G  N  S  R  
                    Query_4525   181  ATTCAAAGAGCTCACTGCATCTGCAAATGAACAGCCTGAAAAGCGAGGACACGGCCGTCTACTATTGTGTTGGAAGTGGTAACTCCCGCA  270
V  94.1% (239/254)  IGHV3-72*01  227  .........A.......T........................C...............G..T..C....C.A..----------------  300
                                      D  S  K  N  S  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R                 
D  88.9% (8/9)      IGHD2-21*02  12   ---------------------------------------------------------------------------.....G...------  20

                                      T------------>                                  
                                      T  G  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4525   271  CGGGAATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (42/42)   IGHJ4*02     7    ------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_114938

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           352     3e-99
IGHD2-15*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CTGG	TTGCAGTGGTGGTAGCTGCT	N/A	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCTGGTTGCAGTGGTGGTAGCTGCTACTATTTTGACTAC	AKAGCSGGSCYYFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4526   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-23*01  47   .........................................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  I  I  F  G  N  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4526   91   AGTGGGTCTCAATTATTTTTGGAAATGGTGGTACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCTAGAGACAATGCCA  180
V  95.2% (237/249)  IGHV3-23*01  137  ...........GC....AG...T.G........G..........................................C.........T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  T  L  D  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  G  C  S  G  G  S  
                    Query_4526   181  GGAACACGCTGGATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGCTGGTTGCAGTGGTGGTAGCT  270
V  95.2% (237/249)  IGHV3-23*01  227  A..........T.........................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.0% (19/20)    IGHD2-15*01  7    -------------------------------------------------------------------------...T.............  23

                                      ---------------->                                  
                                      C  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4526   271  GCTACTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  95.0% (19/20)    IGHD2-15*01  24   ...------------------------------------------------  26
J  97.9% (47/48)    IGHJ4*02     1    ---....C...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_221806

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            402     3e-114
IGHD2-2*02                                                                                            16.1    2.6   
IGHJ6*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGACGACTGTACTACTTCCCC	CTGCTATA	GCGACTATC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGACGACTGTACTACTTCCCCCTGCTATAGCGACTATCACTACTTCGGTTTGGACGTC	ARVDDCTTSPCYSDYHYFGLDV	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                     <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                      Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  T  F  T  N  Y 
                    Query_4527  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGACTTCTGGATACACCTTCACTAACTAT  91
V  94.5% (273/289)  IGHV1-3*01  7    .....T...........G.............................................G.....................G....  96
                                      Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                     --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                      A  I  H  W  V  R  Q  A  P  G  Q  S  L  E  W  M  G  W  I  N  A  A  N  G  H  T  K  Y  S  Q 
                    Query_4527  92   GCTATACATTGGGTGCGCCAGGCCCCCGGACAAAGTCTTGAGTGGATGGGGTGGATCAACGCTGCCAATGGCCACACAAAATATTCACAG  181
V  94.5% (273/289)  IGHV1-3*01  97   .....G.............................G..............A.............G......TA.................  186
                                      A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                     -----------------------------------------FR3-IMGT-----------------------------------------
                                      N  F  Q  G  R  V  T  I  S  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  T  S  E  D  A  A 
                    Query_4527  182  AACTTCCAGGGCAGAGTCACCATTTCCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGACATCTGAGGACGCGGCT  271
V  94.5% (273/289)  IGHV1-3*01  187  ..G.....................A................................................G......A...A.....  276
                                      K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                     -----------><----------------------------CDR3-IMGT--------------------------->            
                                      V  Y  Y  C  A  R  V  D  D  C  T  T  S  P  C  Y  S  D  Y  H  Y  F  G  L  D  V  W  G  Q  G 
                    Query_4527  272  GTCTATTACTGTGCGAGAGTCGACGACTGTACTACTTCCCCCTGCTATAGCGACTATCACTACTTCGGTTTGGACGTCTGGGGCCAAGGG  361
V  94.5% (273/289)  IGHV1-3*01  277  ..G................-----------------------------------------------------------------------  295
                                      V  Y  Y  C  A  R                                                                         
D  100.0% (8/8)     IGHD2-2*02  22   -----------------------------------------........-----------------------------------------  29
J  96.2% (51/53)    IGHJ6*02    10   ----------------------------------------------------------......A....A....................  41

                                                          
                                      T  T  V  T  V  S  S 
                    Query_4527  362  ACCACGGTCACCGTCTCCTCA  382
J  96.2% (51/53)    IGHJ6*02    42   .....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_221807

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           315     5e-88
IGHD6-19*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCAAC	GGGTATAGAAGTGGC	AGATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAACGGGTATAGAAGTGGCAGATAACTACTACTATGGTTTGGACGTC	AATGIEVADNYYYGLDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  H  G  M  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_4528   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAGTCATGGCATGCAGTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.0% (223/245)  IGHV3-30*03  47   ...........................................T..CT..........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  F  N  G  S  H  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_4528   91   AATGGTTGGCAGTTATCTCATTTAATGGAAGTCATACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  91.0% (223/245)  IGHV3-30*03  137  .G...G..........A....A.G........A...A...........................A......A..................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  A  L  Y  L  Q  M  A  S  L  R  S  A  D  T  A  V  Y  F  C  A  A  T  G  I  E  V  A  D  
                    Query_4528   181  AGAACGCACTGTATCTGCAAATGGCCAGCCTGAGATCTGCGGACACGGCTGTTTACTTCTGTGCGGCAACGGGTATAGAAGTGGCAGATA  270
V  91.0% (223/245)  IGHV3-30*03  227  .....A.G...............AA..........G...A............G..T.A.......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.3% (14/15)    IGHD6-19*01  1    ----------------------------------------------------------------------........C......-----  15

                                      GT-------------------->                                 
                                      N  Y  Y  Y  G  L  D  V  W  G  H  G  T  T  V  T  V  S  S 
                    Query_4528   271  ACTACTACTATGGTTTGGACGTCTGGGGCCACGGGACCACGGTCACCGTCTCCTCA  326
J  94.6% (53/56)    IGHJ6*02     7    ..........C...A................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_221800

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTCGGACCTC	TGATAGTAGTGGTTATT	TCAAGTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTCGGACCTCTGATAGTAGTGGTTATTTCAAGTGCTTTGACTAC	ARARTSDSSGYFKCFDY	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4529   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGATCCCTTAGTGGTTCCTACTGGAGCTGGATCCGCCAGCCCCCCGGGAAGGGGCTGGAG  90
V  93.9% (229/244)  IGHV4-34*01  49   ................................G...T.C.......A...........................A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  Q  S  V  G  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_4529   91   TGGATTGGGGAAATCAATCAAAGTGTAGGCACCAAGTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  93.9% (229/244)  IGHV4-34*01  139  ....................T....G.A.......C......................................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  F  C  A  R  A  R  T  S  D  S  S  G  Y 
                    Query_4529   181  CAGTTCTCCCTGAAGCTAACCTCTGTGACCGCCGCGGACACGGCTCTCTATTTTTGTGCGAGAGCTCGGACCTCTGATAGTAGTGGTTAT  270
V  93.9% (229/244)  IGHV4-34*01  229  .................G.G.........................G.G....AC..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (17/17)   IGHD3-22*01  10   --------------------------------------------------------------------------................  25

                                      ----------------->                                  
                                       F  K  C  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4529   271  TTCAAGTGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (17/17)   IGHD3-22*01  26   .---------------------------------------------------  26
J  100.0% (44/44)   IGHJ4*02     5    --------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_221801

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     8e-121
IGHD2-2*02                                                                                            10.3    141   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCTAAAACAGGCCCAGAA	ATACC	CGACCCCCG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCTAAAACAGGCCCAGAAATACCCGACCCCCGACTTCGGTATGGACGTC	ARPLKQAQKYPTPDFGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	280	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_4530   1    GCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAATTA  90
V  96.9% (280/289)  IGHV5-51*03  6    ........................G.............................................................GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  R  L  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_4530   91   CTGGATCGCCTGGGTGCGCCGGCTGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.9% (280/289)  IGHV5-51*03  96   ........G...........A.A...................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  H  W  S  S  L  K  A  S  D  P  A
                    Query_4530   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGCACCGCCTACCTGCACTGGAGCAGCCTGAAGGCCTCGGACCCCGC  270
V  96.9% (280/289)  IGHV5-51*03  186  ...................................A........................G........................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  P  L  K  Q  A  Q  K  Y  P  T  P  D  F  G  M  D  V  W  G  Q  G  T  A  V
                    Query_4530   271  CATGTATTACTGTGCGAGACCTCTAAAACAGGCCCAGAAATACCCGACCCCCGACTTCGGTATGGACGTCTGGGGCCAAGGGACCGCGGT  360
V  96.9% (280/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD2-2*02   27   ---------------------------------------.....----------------------------------------------  31
J  96.0% (48/50)    IGHJ6*02     13   -----------------------------------------------------...A............................A....  49

                                                   
                                        T  V  S  S 
                    Query_4530   361  CACCGTCTCCTCA  373
J  96.0% (48/50)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_71307

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         380     1e-107
IGHD3-16*01                                                                                           12.2    34    
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	ATTATG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATGACTACTTTGACTAC	ARHYDYFDY	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  L  E  V  K  K  P  G  E  S  L  R  I  S  C  R  G  F  G  Y  S  F  T  S  F
                    Query_4531     1    GCAGCTGGTGCAGTCTGGACTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGTTTTGGATACAGCTTTACCAGCTT  90
V  92.0% (266/289)  IGHV5-10-1*01  6    ...................GC.........................................A.....C....................A  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  G  L  E  R  M  G  R  I  D  P  F  D  S  S  T  D  Y  T  P
                    Query_4531     91   CTGGATCACTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGCGGATGGGAAGAATTGATCCTTTTGACTCTTCTACCGACTATACGCC  180
V  92.0% (266/289)  IGHV5-10-1*01  96   ........GC.................................T.......G..G.........AG........A....A....C.GC..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  N  S  I  S  T  A  Y  L  H  L  S  S  L  K  A  S  D  T  G
                    Query_4531     181  GTCATTCCAAGGCCACGTCACCATCTCAGCTGACAACTCCATCAGTACTGCCTACCTGCACTTGAGCAGCCTGAAGGCCTCGGACACCGG  270
V  92.0% (266/289)  IGHV5-10-1*01  186  ...C................................G........C..............G.G..........................C  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------CDR3-IMGT-------->                                  
                                          M  Y  Y  C  A  R  H  Y  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4531     271  CATGTATTACTGTGCGAGACATTATGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  344
V  92.0% (266/289)  IGHV5-10-1*01  276  ...................-------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                        
D  100.0% (6/6)     IGHD3-16*01    3    --------------------......------------------------------------------------  8
J  100.0% (48/48)   IGHJ4*02       1    --------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_221803

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           316     2e-88
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAA	TATTATTATGG	AGCGGACAATACTCCCTTTTTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGAATATTATTATGGAGCGGACAATACTCCCTTTTTCCTTGACTCC	ARDEYYYGADNTPFFLDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  F  G  F  S  F  S  D  Y  G  I  H  W  V  R  Q  A  P  G  K  G  P  
                    Query_4532   1    GGTCCCTGAGACTCTCCTGTGCCGCGTTTGGATTCAGCTTCAGTGACTATGGAATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCCGG  90
V  90.4% (226/250)  IGHV3-33*01  47   ......................A....C........C.......AG......C..G...............................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  M  V  W  Y  D  G  T  E  K  Y  V  A  D  S  V  K  G  R  F  T  L  S  R  D  N  S  
                    Query_4532   91   AGTGGGTGGCAATGGTCTGGTATGATGGAACTGAAAAATATGTAGCAGACTCCGTGAAGGGCCGATTCACCCTCTCCAGAGACAATTCCA  180
V  90.4% (226/250)  IGHV3-33*01  137  ...........G.TA.A.............G.A.T.....CTAT...........................A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  E  Y  Y  Y  G  A  
                    Query_4532   181  AGAACACGGTGTATTTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTCTATTACTGTGCGAGAGATGAATATTATTATGGAGCGG  270
V  90.4% (226/250)  IGHV3-33*01  227  ........C.....C.....................C...............G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD3-10*01  2    --------------------------------------------------------------------------.....C.....-----  12

                                      IMGT--------------------->                                  
                                      D  N  T  P  F  F  L  D  S  W  G  Q  G  T  L  V  T  V  Y  S  
                    Query_4532   271  ACAATACTCCCTTTTTCCTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTACTCAG  330
J  95.2% (40/42)    IGHJ4*02     7    ------------------......A.............................C.....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_114931

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           419     2e-119
IGHD6-13*01                                                                                           14.1    9.8   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	ARHRYLGPRQQATENDY	291	341	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	69	2	0	97.2
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	112	2	0	98.2
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	292	280	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  Q  G  S  G  Y  T  F  S  T  
                    Query_4533   7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTTCCACCT  96
V  95.9% (280/292)  IGHV5-51*01  5    ...........................................G..................A...............G....A...G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  V  I  Y  P  G  D  S  D  A  R  Y  S  
                    Query_4533   97   ACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGTTGGGAGTCATCTATCCTGGTGACTCTGATGCCAGATACAGCC  186
V  95.9% (280/292)  IGHV5-51*01  95   .........G.....................................A....GA.......................A............  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_4533   187  CGTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCG  276
V  95.9% (280/292)  IGHV5-51*01  185  .......................A...........................................C......................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><--------------------CDR3-IMGT-------------------->                         
                                      A  M  Y  Y  C  A  R  H  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  Y  W  G  Q  G  T  L  V  T  
                    Query_4533   277  CCATGTATTACTGTGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCACCG  366
V  95.9% (280/292)  IGHV5-51*01  275  ......................--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD6-13*01  8    ----------------------------------------.......-------------------------------------------  14
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------................................  39

                                               
                                      V  S  S  
                    Query_4533   367  TCTCCTCAG  375
J  100.0% (41/41)   IGHJ4*02     40   .........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_114930

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           388     5e-110
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              50.7    2e-10 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGCG	GGGTGGATAGGG	GCTCGTCC	TTGGTCTGGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGTGGATAGGGGCTCGTCCTTGGTCTGGCTTC	AGWIGARPWSGF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	267	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_4534   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  93.4% (267/286)  IGHV5-51*03  6    ..............................................................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  Q  G  L  E  W  L  G  I  I  Y  P  V  D  S  E  T  T  Y  S  P
                    Query_4534   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGCAAGGCCTGGAGTGGCTGGGAATCATCTATCCGGTTGACTCTGAAACCACATACAGCCC  180
V  93.4% (267/286)  IGHV5-51*03  96   ...............................A..............A....G...........T.G.........T....G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  Q  G  Q  V  T  L  S  V  D  K  S  I  S  T  A  Y  L  Q  R  R  S  L  E  A  S  G  T  A
                    Query_4534   181  GGCCTTCCAAGGCCAGGTCACCCTCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGCGGAGGAGCCTGGAGGCCTCGGGCACCGC  270
V  93.4% (267/286)  IGHV5-51*03  186  .T....................A......C...............................T....C......A.........A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  F  W  A  G  W  I  G  A  R  P  W  S  G  F  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_4534   271  CATGTATTTCTGGGCGGGGTGGATAGGGGCTCGTCCTTGGTCTGGCTTCTGGGGGCAGGGAACCCTGGTCACCGTTTCCCCAG  353
V  93.4% (267/286)  IGHV5-51*03  276  ........A...T...-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  100.0% (8/8)     IGHD6-6*01   11   ----------------------------........-----------------------------------------------  18
J  91.4% (32/35)    IGHJ4*02     14   ------------------------------------------------......C....................C...T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_114933

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACAGACTAC	AALIAASHFTDY	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	101	13	0	88.6
CDR3-IMGT (germline)	290	292	3	3	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_4535   3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCA  92
V  93.1% (270/290)  IGHV5-51*01  2    ..................................A...................................T...................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  V  P  G  Q  G  L  E  L  M  G  L  I  Y  P  G  D  S  D  T  W  Y  
                    Query_4535   93   CCTACTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCAAGGCCTGGAGTTGATGGGGCTCATCTATCCTGGTGACTCTGATACCTGGTACA  182
V  93.1% (270/290)  IGHV5-51*01  92   G.........................A........A............G.......A..........................A.A....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  T  S  A  Y  L  Q  W  T  P  L  K  A  S  D  
                    Query_4535   183  GTCCGTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCACCTCCGCCTACCTGCAGTGGACCCCCTTGAAGGCCTCGGACA  272
V  93.1% (270/290)  IGHV5-51*01  182  .C......................C...................A...G.A..................G.AG.C...............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4535   273  CCGCCATTTACTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACAGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  359
V  93.1% (270/290)  IGHV5-51*01  272  .......G..T.........-------------------------------------------------------------------  291
                                      T  A  M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    -------------------------...A.....-----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -----------------------------------------------.................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_114932

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	69	2	0	97.2
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	292	277	15	0	94.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  H  S  F  T  N  
                    Query_4536   7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGACACAGCTTTACCAACT  96
V  94.9% (277/292)  IGHV5-51*01  5    ..............................A...................................G.......T............G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  
                    Query_4536   97   ACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCC  186
V  94.9% (277/292)  IGHV5-51*01  95   .........G...........................C....................C...................C...........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  G  L  K  A  S  D  T  
                    Query_4536   187  CGTCCTTCGAGGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCGGCCTGAAGGCCTCGGACACCG  276
V  94.9% (277/292)  IGHV5-51*01  185  ........C.A...................................C...........G......A..A.....................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------------CDR3-IMGT----------------------->                   
                                      A  I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  
                    Query_4536   277  CCATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGG  366
V  94.9% (277/292)  IGHV5-51*01  275  ....G.................--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  92.9% (13/14)    IGHD1-26*01  4    ------------------------------..........C...----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    -----------------------------------------------.......A...................................  48

                                                    
                                      V  T  V  S  S 
                    Query_4536   367  TCACCGTCTCCTCA  380
J  98.2% (56/57)    IGHJ6*02     49   ..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_221808

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            375     3e-106
IGHD1-26*01                                                                                           12.2    35    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	265	25	0	91.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y
                    Query_4537   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACCACTTA  90
V  91.4% (265/290)  IGHV1-8*01   6    ..................G..........................A....................T........C..........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F  A  Q
                    Query_4537   91   TGATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTTGCACA  180
V  91.4% (265/290)  IGHV1-8*01   96   .................................A..G..............A..............C.G...T..........A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D  T  A
                    Query_4537   181  GAGATTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGACACGGC  270
V  91.4% (265/290)  IGHV1-8*01   186  ..AG...C............................C.....A.................GC............G..C..AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_4537   271  CATATATTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  352
V  91.4% (265/290)  IGHV1-8*01   276  .G.G................--------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   -----------------------------...G.....--------------------------------------------  18
J  100.0% (40/40)   IGHJ5*02     11   ------------------------------------------........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_114934

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           383     1e-108
IGHD2-21*02                                                                                           18.0    0.58  
IGHJ3*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACTATGGGG	GGTGGTGAC	CGCCCGGGGC	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACTATGGGGGGTGGTGACCGCCCGGGGCGCTTTTGATATC	ARELWGVVTARGAFDI	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	114	0	0	100
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	246	1	0	99.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4538   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATAAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.6% (246/247)  IGHV3-53*01  47   .......................................................G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_4538   91   AGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  99.6% (246/247)  IGHV3-53*01  137  ..........................................................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  L  W  G  V  V  T  A  
                    Query_4538   181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGAACTATGGGGGGTGGTGACCGCCC  270
V  99.6% (246/247)  IGHV3-53*01  227  ...................................................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (9/9)     IGHD2-21*02  11   ----------------------------------------------------------------------------.........-----  19

                                      ---------------->                                 
                                      R  G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_4538   271  GGGGCGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCA  320
J  100.0% (45/45)   IGHJ3*02     5    -----.............................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_114937

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           316     2e-88
IGHD3-10*01                                                                                           10.3    115  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGA	CTTCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGACTTCAGGCCTTTGACTCC	ARGGLQAFDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  G  G  F  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_4539   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAACAGTGGTGGATTCTACTGGACTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  90.4% (226/250)  IGHV4-31*03  49   .......................C................G.........T.A........GC...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  Y  T  G  H  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  L  D  T  S 
                    Query_4539   91   CTAGAGTGGATTGGTTACATCTTTTACACTGGACACACCTACTACAATCCGTCCCTCAGGAGTCGACTTACCATTTCACTGGACACATCT  180
V  90.4% (226/250)  IGHV4-31*03  139  ..G...........G.......A.....G...GAG............C..........A.......G.......A...G.A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       E  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  L  Q  A  F  D 
                    Query_4539   181  GAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGGGGACTTCAGGCCTTTGAC  270
V  90.4% (226/250)  IGHV4-31*03  229  A...................G.....C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------.....---------------  20
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4539   271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.7% (43/44)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_114936

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           297     8e-83
IGHD2-21*01                                                                                           14.1    9.5  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTGTCGGATCTACCGGGGCCCGATA	TGATTGC	ACAAATACTGTTTGTCATCGGGAGCCCCCATCAGCCCCTTTCGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGTCGGATCTACCGGGGCCCGATATGATTGCACAAATACTGTTTGTCATCGGGAGCCCCCATCAGCCCCTTTCGGAGTTGACTAC	ATVGSTGARYDCTNTVCHREPPSAPFGVDY	243	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	41	10	0	80.4
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	218	28	0	88.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  F  M  T  W  I  R  Q  A  P  G  Q  G  L  
                    Query_4540   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTTCATGACCTGGATACGCCAGGCTCCAGGGCAGGGGCTGG  90
V  88.6% (218/246)  IGHV3-11*01  47   ...................................................A.....G......C...............A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  V  I  A  Y  I  S  G  S  G  S  A  I  K  Y  S  D  S  V  R  R  R  F  T  I  S  R  D  N  A  
                    Query_4540   91   AGGTCATCGCGTACATCAGTGGTAGTGGTAGTGCCATAAAGTACTCAGACTCTGTGAGGCGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  88.6% (218/246)  IGHV3-11*01  137  ..TGGG.TT.A.....T...A...........A.....T.C...G............A.G..............................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      R  K  S  L  Y  L  Q  M  N  S  L  G  A  D  D  S  A  I  Y  Y  C  A  T  V  G  S  T  G  A  R  
                    Query_4540   181  GGAAGTCACTGTATCTGCAAATGAACAGCCTGGGCGCCGACGACTCGGCCATTTACTACTGTGCGACTGTCGGATCTACCGGGGCCCGAT  270
V  88.6% (218/246)  IGHV3-11*01  227  A...C...........................A.A.....G...A.....G.G..T..........------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      -------------CDR3-IMGT--------------------------------------->                            
                                      Y  D  C  T  N  T  V  C  H  R  E  P  P  S  A  P  F  G  V  D  Y  W  G  Q  G  I  L  V  T  V  
                    Query_4540   271  ATGATTGCACAAATACTGTTTGTCATCGGGAGCCCCCATCAGCCCCTTTCGGAGTTGACTACTGGGGCCAGGGAATTCTGGTCACCGTCT  360
D  100.0% (7/7)     IGHD2-21*01  16   -.......----------------------------------------------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    ------------------------------------------------------.....................CC.............  42

                                            
                                      S  S  
                    Query_4540   361  CCTCAG  366
J  95.2% (40/42)    IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_327365

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD3-3*01                                                                                            18.0    0.59 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGCCTCGTGCCTG	GGAGTGGTT	TTGAGGCTATTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGCCTCGTGCCTGGGAGTGGTTTTGAGGCTATTCCTGACTAC	AKSLVPGSGFEAIPDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4541   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTTAGTAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-23*01  47   ............................T..............C.............G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  G  I  T  G  S  G  D  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4541   91   AGTGGCTCTCAGGTATTACTGGCAGTGGTGATAACACCTACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (236/248)  IGHV3-23*01  137  .....G......C.....G...T.......G..G...A....................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  S  L  V  P  G  S  G  
                    Query_4541   181  AGAACACGCTGTATCTGCAAATAAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAAAAGCCTCGTGCCTGGGAGTGGTT  270
V  95.2% (236/248)  IGHV3-23*01  227  ......................G.............................A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD3-3*01   15   ---------------------------------------------------------------------------------.........  23

                                      T------------------>                                  
                                      F  E  A  I  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4541   271  TTGAGGCTATTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (41/41)   IGHJ4*02     8    -------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_50762

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           366     2e-103
IGHD2-2*01                                                                                            41.1    7e-08 
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGCGCGAG	ATTGTAGTAGTACCAGCTGCT	TTGGAACTGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCGCGAGATTGTAGTAGTACCAGCTGCTTTGGAACTGGTGCTTTTGATATC	ARGARDCSSTSCFGTGAFDI	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  D  Y  Y  W  N  W  I  R  Q  H  P  E  K  G 
                    Query_4542   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGATGATTACTACTGGAACTGGATCCGCCAGCACCCAGAGAAGGGC  90
V  96.8% (242/250)  IGHV4-31*01  49   ..............................................G..G...........G....................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  M  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 
                    Query_4542   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCATGTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACGTCT  180
V  96.8% (242/250)  IGHV4-31*01  139  .....................................CC...................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  A  Y  Y  C  A  R  G  A  R  D  C  S  S 
                    Query_4542   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGCATATTACTGTGCGAGAGGGGCGCGAGATTGTAGTAGT  270
V  96.8% (242/250)  IGHV4-31*01  229  ....................................................TG................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (21/21)   IGHD2-2*01   6    -------------------------------------------------------------------------------...........  16

                                      DR3-IMGT------------------------>                                  
                                       T  S  C  F  G  T  G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4542   271  ACCAGCTGCTTTGGAACTGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  337
D  100.0% (21/21)   IGHD2-2*01   17   ..........---------------------------------------------------------  26
J  100.0% (47/47)   IGHJ3*02     4    --------------------...............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_269447

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           316     2e-88
IGHD2-15*01                                                                                           35.3    4e-06
IGHJ5*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD2-15*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGTG	GGACATTGTGATGGTGGTAGTTGCTACTCC	CAGAAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTAGAGAAGTGGGACATTGTGATGGTGGTAGTTGCTACTCCCAGAATTGGTTCGACTCC	VREVGHCDGGSCYSQNWFDS	249	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	19	11	0	63.3
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	256	8	6	2	0	75
Total	N/A	N/A	256	229	27	0	89.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  T  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4543   1    GGTCCCTGAGACTCTCCTGTACAACTTCAGGATTCACCTTCGGGGACTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  89.5% (229/256)  IGHV3-49*04  47   .......................G....T...........T..T..T......................................G....  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  R  N  R  Y  G  G  A  G  K  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_4543   91   AATGGGTAGGATTCATTAGGAGGAATCGATACGGAGGGGCAGGAAAATACGCCGCGTCTGTGAAAGGCAGATTCACCATTTCAAGAGATG  180
V  89.5% (229/256)  IGHV3-49*04  137  .G........T........A..C..AGCT..T..T...A..AC.G..................................C..........  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  L  K  S  V  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  V  R  E  V  G  H  C  
                    Query_4543   181  ATCTCAAAAGCGTCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTATTGTGTTAGAGAAGTGGGACATTGTG  270
V  89.5% (229/256)  IGHV3-49*04  227  ..TC.......A....................................................C...AC......--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  86.7% (26/30)    IGHD2-15*01  2    --------------------------------------------------------------------------------...T.....A  11

                                      ----CDR3-IMGT------------------------>                                  
                                      D  G  G  S  C  Y  S  Q  N  W  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4543   271  ATGGTGGTAGTTGCTACTCCCAGAATTGGTTCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
D  86.7% (26/30)    IGHD2-15*01  12   G.........C.........----------------------------------------------------  31
J  97.8% (45/46)    IGHJ5*01     6    --------------------------....................A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_290659

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           291     5e-81
IGHD5-18*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	TCCGCAC	GTGGGTACATCTCTGGTT	TGCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCGCACGTGGGTACATCTCTGGTTTGCTCTTTGACCAC	SARGYISGLLFDH	249	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	134	30	24	6	0	80
FR3-IMGT	135	248	114	101	13	0	88.6
Total	N/A	N/A	248	217	31	0	87.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  T  S  G  F  N  F  G  D  Y  A  V  T  W  V  R  Q  V  P  G  K  G  L  
                    Query_4544   1    GGTCCCTGAGACTCTCCTGTTCAACCTCTGGATTCAACTTTGGTGACTATGCTGTGACTTGGGTCCGCCAGGTTCCAGGGAAGGGACTGG  90
V  87.5% (217/248)  IGHV3-49*04  47   ....................A..G.T..........C.........T......A...GC.............C............G....  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  G  Q  G  Y  G  G  T  A  D  Y  A  A  S  V  R  G  R  F  L  I  S  R  D  
                    Query_4544   91   AGTGGGTCGGATTCATTAGAGGCCAAGGGTATGGTGGGACAGCGGACTACGCCGCGTCTGTGAGAGGCAGATTCCTTATCTCAAGAGATG  180
V  87.5% (217/248)  IGHV3-49*04  137  .......A..T.........A..A...CT............A.A..A................A..........ACC.............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      D  S  T  S  I  A  Y  L  Q  M  S  S  L  K  T  D  D  T  G  L  Y  Y  C  S  A  R  G  Y  I  S  
                    Query_4544   181  ATTCCACAAGTATCGCCTATCTGCAGATGAGCAGCCTGAAAACCGACGACACAGGCCTGTATTATTGTTCCGCACGTGGGTACATCTCTG  270
V  87.5% (217/248)  IGHV3-49*04  227  ......A...C..............A....A...............G.......C.G.......C...----------------------  294
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------------------------....A....G..A..  15

                                      GT-------------->                                  
                                      G  L  L  F  D  H  W  G  Q  G  A  L  V  S  V  S  S  
                    Query_4544   271  GTTTGCTCTTTGACCACTGGGGCCAGGGAGCCCTGGTCAGTGTCTCCTCAG  321
D  83.3% (15/18)    IGHD5-18*01  16   ...------------------------------------------------  18
J  90.9% (40/44)    IGHJ4*02     5    -------.......T..............A.........CC..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_290658

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD1-26*01                                                                                           18.0    0.61 
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAACAGTTTGTTGGCACCTG	AGTGGGAGC	CTGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACAGTTTGTTGGCACCTGAGTGGGAGCCTGATGATGCTTTTGATATC	ARVNSLLAPEWEPDDAFDI	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  R  S  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4545   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGCAGAAGCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.5% (231/247)  IGHV4-4*02   49   ...............................G............T..T.A........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  N  T  N  Y  N  P  S  L  K  R  R  L  T  I  S  V  D  K  S  K 
                    Query_4545   91   GAGTGGATTGGGGAGATCTATCATGGTGGGAATACCAACTACAACCCGTCCCTCAAGAGGCGACTTACTATATCAGTAGACAAGTCCAAG  180
V  93.5% (231/247)  IGHV4-4*02   139  ..............A.........A......GC..........................T...G.C..C.....................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       N  Q  F  S  L  Q  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  S  L  L  A  P  E 
                    Query_4545   181  AACCAATTCTCCCTGCAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGAGAGTTAACAGTTTGTTGGCACCTGAG  270
V  93.5% (231/247)  IGHV4-4*02   229  .....G.........A.......C..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD1-26*01  6    ----------------------------------------------------------------------------------------..  7

                                      MGT----------------------->                                  
                                       W  E  P  D  D  A  F  D  I  W  G  Q  G  T  L  A  I  V  S  S  
                    Query_4545   271  TGGGAGCCTGATGATGCTTTTGATATCTGGGGCCAAGGGACATTGGCCATCGTCTCTTCAG  331
D  100.0% (9/9)     IGHD1-26*01  8    .......------------------------------------------------------  14
J  94.0% (47/50)    IGHJ3*02     1    -----------...............................A...T..C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_179510

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD2-15*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCAGATCAAA	GATCTTGTAGTGGT	AGACGGTGCTACCCCC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCAGATCAAAGATCTTGTAGTGGTAGACGGTGCTACCCCCTTGAGTAC	AKADQRSCSGRRCYPLEY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  A  M  S  W  V  R  Q  A  P  G  K  V  L  
                    Query_4546   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGCCATGAGCTGGGTCCGCCAGGCCCCAGGGAAGGTGCTGG  90
V  94.7% (234/247)  IGHV3-23*01  47   ...............................................T.........................T..........G.....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  A  S  D  D  G  T  Y  H  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_4546   91   AGTGGGTCTCAGCTATTAGTGCTAGTGATGATGGCACATACCACGCAGACTCCGTGAGGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.7% (234/247)  IGHV3-23*01  137  .....................G.....G..G.A........T...............A................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  F  L  Q  M  S  R  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  D  Q  R  S  C  S  
                    Query_4546   181  AGAACACGCTGTTTCTGCAGATGAGCAGACTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGGCAGATCAAAGATCTTGTAGTG  270
V  94.7% (234/247)  IGHV3-23*01  227  ............A......A....A...C......................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD2-15*01  3    ------------------------------------------------------------------------------...A........  14

                                      IMGT--------------------->                                  
                                      G  R  R  C  Y  P  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4546   271  GTAGACGGTGCTACCCCCTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  92.9% (13/14)    IGHD2-15*01  15   ..----------------------------------------------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ------------------....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_290651

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           313     1e-87
IGHD1-7*01                                                                                            10.3    118  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGCGCAGA	GAACT	CGATT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGCGCAGAGAACTCGATTACTACTTTGACTCC	ARVRRELDYYFDS	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	223	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  V  S  G  T  Y  M  S  W  V  R  Q  G  P  R  K  G  L  
                    Query_4547   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCTCCGTCAGTGGCACCTACATGAGCTGGGTCCGCCAGGGTCCACGGAAGGGACTGG  90
V  90.7% (223/246)  IGHV3-53*01  47   ...................................A........A...A.......................C....G.......G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  I  I  Y  T  G  G  P  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_4547   91   AGTGGGTCTCTATTATCTATACTGGTGGTCCCACATTCTACGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAATTCCAAGA  180
V  90.7% (223/246)  IGHV3-53*01  137  ..........AG....T....GC......AG.....A........................A............................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------CDR3-IMGT-------
                                      N  T  V  Y  L  Q  M  N  S  L  R  G  E  D  T  A  I  Y  Y  C  A  R  V  R  R  E  L  D  Y  Y  
                    Query_4547   181  ACACAGTCTATCTTCAAATGAACAGCCTGCGCGGCGAGGACACGGCCATTTATTACTGTGCGAGAGTGCGCAGAGAACTCGATTACTACT  270
V  90.7% (223/246)  IGHV3-53*01  227  ....GC.G.....................A.A.C.............G.G................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (5/5)     IGHD1-7*01   11   --------------------------------------------------------------------------.....-----------  15
J  95.8% (46/48)    IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  S  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_4547   271  TTGACTCCTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  312
J  95.8% (46/48)    IGHJ4*02     7    ......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_290650

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         322     2e-90
IGHD3-22*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	TCACCCAC	TGATAGTA	ATAATAT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGATCACCCACTGATAGTAATAATATC	ARSPTDSNNI	241	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	226	20	0	91.9


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  V  G  S  G  Y  Y  W  G  W  I  R  Q  S  P  G  K  G  L 
                    Query_4548     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCGTCGGCAGTGGTTATTACTGGGGCTGGATCCGGCAGTCCCCAGGGAAGGGGCTG  90
V  91.9% (226/246)  IGHV4-38-2*01  49   ....................................A..A..........C.....................C.................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  A  T  I  H  H  S  G  S  T  H  Y  N  P  S  L  K  S  R  V  L  I  S  I  D  T  S  M 
                    Query_4548     91   GAGTGGATTGCGACTATCCATCATAGTGGCAGCACCCACTACAACCCGTCCCTCAAGAGTCGAGTTCTTATATCAATAGACACGTCCATG  180
V  91.9% (226/246)  IGHV4-38-2*01  139  ..........G..G....T..........G......T............................CACC......G............A.  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------CDR3-IMGT--------->
                                         N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  S  P  T  D  S  N  N  I 
                    Query_4548     181  AACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCATTTATTACTGTGCAAGATCACCCACTGATAGTAATAATATC  270
V  91.9% (226/246)  IGHV4-38-2*01  229  ................A......C........................G.G...........G...------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD3-22*01    10   --------------------------------------------------------------------------........--------  17
J  97.1% (34/35)    IGHJ4*02       14   -----------------------------------------------------------------------------------------.  14

                                                                          
                                         W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_4548     271  TGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  304
J  97.1% (34/35)    IGHJ4*02       15   ................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_290652

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           288     4e-80
IGHD3-10*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCCGCCGC	TTCGGGGA	CTTGCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCCGCCGCTTCGGGGACTTGCCCCTTGACTAC	ARDGRRFGDLPLDY	234	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	11	1	0	91.7
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	119	21	14	7	0	66.7
FR3-IMGT	120	233	114	103	11	0	90.4
CDR3-IMGT (germline)	234	241	8	8	0	0	100
Total	N/A	N/A	230	207	23	0	90


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  V  S  G  L  S  V  S  S  N  Y  M  S  W  F  R  Q  P  P  G  K  G  L  E  W  V  S  V  L 
                    Query_4549   12   TGTGCAGTCTCTGGGCTCAGCGTCAGTAGCAACTACATGAGCTGGTTCCGCCAGCCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTCTT  101
V  90.0% (207/230)  IGHV3-53*01  64   .......C.......T...C.........................G........G................................A..  153
                                       C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I 

                                      ---CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-----------
                                       Y  S  G  G  V  T  F  F  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  R  N  T  L  Y  L  Q 
                    Query_4549   102  TATAGTGGAGGAGTCACGTTCTTCGCAGACTCCGTGAAGGGCCGATTCACCATATCCAGAGACGATTCCAGGAACACATTGTATCTTCAA  191
V  90.0% (207/230)  IGHV3-53*01  154  .....C..T..TAG...A.A..A..............................C.........A......A......GC...........  243
                                       Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 

                                      -----------------------------------------><----------------CDR3-IMGT--------------->      
                                       M  N  N  L  R  A  E  D  T  A  V  Y  F  C  A  R  D  G  R  R  F  G  D  L  P  L  D  Y  W  G 
                    Query_4549   192  ATGAACAACCTCAGAGCCGAGGACACGGCCGTCTATTTCTGTGCGAGAGATGGCCGCCGCTTCGGGGACTTGCCCCTTGACTACTGGGGC  281
V  90.0% (207/230)  IGHV3-53*01  244  .......G...G....................G....A............----------------------------------------  293
                                       M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                           
D  100.0% (8/8)     IGHD3-10*01  13   ------------------------------------------------------------........----------------------  20
J  100.0% (42/42)   IGHJ4*02     7    ----------------------------------------------------------------------------..............  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_4549   282  CAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (42/42)   IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_290655

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           277     8e-77
IGHD6-13*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GAA	CAGCTGG	GGAATC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGAACAGCTGGGGAATCGACTAC	ARNSWGIDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	96	18	0	84.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	212	35	0	85.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  H  W  M  H  W  V  R  Q  T  P  G  K  G  L  
                    Query_4550   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAGCCACTGGATGCACTGGGTCCGCCAAACTCCAGGGAAGGGGCTGC  90
V  85.8% (212/247)  IGHV3-74*01  47   ...........................................T...T.......................G.................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      L  W  V  A  R  I  D  Y  D  G  G  T  L  D  Y  A  A  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_4550   91   TGTGGGTCGCACGCATTGACTACGATGGGGGTACGTTGGACTACGCGGCCTCCGTGGAGGGGCGATTCACCATCTCCAGAGACAACGCCG  180
V  85.8% (212/247)  IGHV3-74*01  137  ........T....T...A.TAGT......A...GCACAAG........A.......A....C...........................A  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      A  N  T  V  Y  L  Q  M  N  S  L  T  V  E  D  S  A  V  Y  Y  C  A  R  N  S  W  G  I  D  Y  
                    Query_4550   181  CCAACACGGTCTATCTGCAAATGAATAGTCTAACAGTCGAGGACTCGGCTGTATATTATTGCGCAAGGAACAGCTGGGGAATCGACTACT  270
V  85.8% (212/247)  IGHV3-74*01  227  AG......C.G..............C.....G.G..C.......A.......G.....C..T.....-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD6-13*01  12   ----------------------------------------------------------------------.......-------------  18
J  95.0% (38/40)    IGHJ4*02     9    -----------------------------------------------------------------------------------.......  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  P  
                    Query_4550   271  GGGGCCAGGGAACCCTCGTCACCGTCTCCCCAG  303
J  95.0% (38/40)    IGHJ4*02     16   ................G............T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_290657

Length=411
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            442     2e-126
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	287	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_4551   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGCCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  98.6% (287/291)  IGHV1-2*04   6    ..................G.............AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_4551   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.6% (287/291)  IGHV1-2*04   96   ..........................................................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_4551   181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  98.6% (287/291)  IGHV1-2*04   186  ..........................................................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W  G  Q
                    Query_4551   271  CGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGGGGCCA  360
V  98.6% (287/291)  IGHV1-2*04   276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------------------....A...........................  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_4551   361  AGGGACCACGGTCACCGTCTCCTCA  385
J  98.2% (56/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40288536


Query= Query_290656

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           282     4e-78
IGHD3-16*01                                                                                           18.0    0.60 
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACAACG	TATGCTTAT	GTCAGTGCTTGGGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAACGTATGCTTATGTCAGTGCTTGGGGATGATGCTTTTGATGTC	ARRQRMLMSVLGDDAFDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  V  T  T  T  R  Y  S  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_4552   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCGTCACCACTACTAGATACTCCTGGGGTTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  86.0% (215/250)  IGHV4-39*01  49   ...............................G....A...G..G..G...T....A......C..........................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Q  M  F  Y  G  G  S  T  Y  Q  N  P  S  L  N  S  R  V  T  V  S  V  D  P  S 
                    Query_4552   91   CTGGAATGGATTGGGCAGATGTTCTATGGTGGGAGCACGTACCAGAACCCGTCGCTGAATAGTCGAGTCACCGTGTCCGTTGACCCGTCC  180
V  86.0% (215/250)  IGHV4-39*01  139  .....G.........AGT..C.AT...A..........C...T.C........C..C..G............A.A.....A...A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  S  Q  F  F  L  N  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  R  Q  R  M  L  M  S 
                    Query_4552   181  AAGAGTCAGTTCTTCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCTGTATATTATTGTGCGAGACGACAACGTATGCTTATGTCA  270
V  86.0% (215/250)  IGHV4-39*01  229  ....AC.......C......G....G...................A.......G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  26   -----------------------------------------------------------------------------.........----  34

                                      -IMGT--------------------->                                  
                                       V  L  G  D  D  A  F  D  V  W  G  Q  G  T  G  V  T  V  S  S  
                    Query_4552   271  GTGCTTGGGGATGATGCTTTTGATGTCTGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  331
J  96.0% (48/50)    IGHJ3*01     1    -----------...............................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_288869

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD3-3*01                                                                                            33.4    2e-05 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGGGGGGCCTT	CGATTTTTGGAGTGGTT	TCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGGGGGGCCTTCGATTTTTGGAGTGGTTTCCACTTTGACTCC	ARLGGAFDFWSGFHFDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  T  S  G  Y  S  F  T  T  H
                    Query_4553   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGCTTTACCACCCA  90
V  94.5% (274/290)  IGHV5-51*01  6    .............................A..................................GG....................G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  M  G  I  I  Y  P  G  V  S  D  T  R  Y  R  P
                    Query_4553   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACATGGGGATCATCTATCCTGGTGTCTCTGATACCAGATACAGACC  180
V  94.5% (274/290)  IGHV5-51*01  96   ........G...................................GG......................A..................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  A
                    Query_4553   181  GTCCTTCCAAGGCCAAGTCACCATCTCAGCCGACAAGTCCGTCAGTACCGCCTACCTGCAGTGGAGGAGCTTGAAGGCCTCGGACACCGC  270
V  94.5% (274/290)  IGHV5-51*01  186  ...............G........................A....C....................C...C...................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  L  G  G  A  F  D  F  W  S  G  F  H  F  D  S  W  G  Q  G  T  L  V  T  V
                    Query_4553   271  CATGTATTATTGTGCGAGACTAGGGGGGGCCTTCGATTTTTGGAGTGGTTTCCACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGT  360
V  94.5% (274/290)  IGHV5-51*01  276  .........C..........----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD3-3*01   7    ---------------------------------.................----------------------------------------  23
J  97.8% (44/45)    IGHJ4*02     4    -----------------------------------------------------.........A...........................  40

                                              
                                        S  S  
                    Query_4553   361  CTCCTCAG  368
J  97.8% (44/45)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_288863

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           349     2e-98
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAC	GGGC	GGATATAG	GTGTATTGGGACT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGACGGGCGGATATAGGTGTATTGGGACTC	TRRADIGVLGL	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	239	16	0	93.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  T  I  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_4554   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGCTTCACCTTCAGTGGCTCTACTATACACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  93.7% (239/255)  IGHV3-73*01  47   .........A.....................G..................G....G..................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      G  W  V  G  R  I  R  G  K  G  N  N  Y  A  T  A  Y  G  E  S  V  K  G  R  F  T  V  S  R  D  
                    Query_4554   91   GGTGGGTTGGCCGTATTAGAGGCAAAGGTAACAATTATGCGACAGCATATGGTGAGTCGGTAAAAGGCAGATTCACCGTCTCCAGAGATG  180
V  93.7% (239/255)  IGHV3-73*01  137  A...................A......C.....G...C.............C..C......G........G......A............  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  R  A  D  I  G  
                    Query_4554   181  ATTCAAAGAACACGGCGTATCTGCAGATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTATTGTACTAGACGGGCGGATATAGGTG  270
V  93.7% (239/255)  IGHV3-73*01  227  .........................A......................................C..........---------------  301
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (8/8)     IGHD5-12*01  3    -------------------------------------------------------------------------------........---  10

                                      ---------->                                  
                                      V  L  G  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4554   271  TATTGGGACTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (35/35)   IGHJ4*02     14   ----------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_288862

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           327     9e-92
IGHD1-1*01                                                                                            12.2    34   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCAGGAT	GTACAA	GTGCCAGGTGATCTGCGGATA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAGATCAGGATGTACAAGTGCCAGGTGATCTGCGGATATACTTCTACGGTTTGGACGTC	AADQDVQVPGDLRIYFYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	230	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  A  T  D  L  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4555   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCGCCACTGATCTTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.6% (230/251)  IGHV4-61*01  49   .......................................AG..G..G.AG........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  L  Y  Y  N  G  V  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  R  D  S  S 
                    Query_4555   91   CTGGAGTGGATTGGATATCTCTATTACAATGGGGTCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAAGAGACTCGTCC  180
V  91.6% (230/251)  IGHV4-61*01  139  ..............G...A.........G....AG...........................................GT....A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  M  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  A  D  Q  D  V  Q  V  P 
                    Query_4555   181  AAGAACCAGTTCTCCCTGAAGATGAACTCTGTGACCGCTGCGGACTCGGCCGTATATTATTGTGCGGCAGATCAGGATGTACAAGTGCCA  270
V  91.6% (230/251)  IGHV4-61*01  229  .....................C...G...................A.......G.....C......AG...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-1*01   2    ------------------------------------------------------------------------------......------  7

                                      CDR3-IMGT-------------------------->                                 
                                       G  D  L  R  I  Y  F  Y  G  L  D  V  W  G  L  G  T  T  V  T  V  S  S 
                    Query_4555   271  GGTGATCTGCGGATATACTTCTACGGTTTGGACGTCTGGGGCCTAGGGACCACGGTCACCGTCTCCTCA  339
J  94.4% (51/54)    IGHJ6*02     9    ---------------....A.......A...............A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_288861

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           367     6e-104
IGHD2-8*01                                                                                            23.8    0.012 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GGGGC	TATTGTAATGATGGTATGTGCTACACC	CCCGT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGGGGCTATTGTAATGATGGTATGTGCTACACCCCCGTCTACTACTACTCCGGTATGGACGTC	AKGGYCNDGMCYTPVYYYSGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  P  
                    Query_4556   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTACTGGATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  97.2% (242/249)  IGHV3-74*01  47   .............................................G........................A................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4556   91   TGTGGGTCTCACGTATCAATAGTGATGGGAGTAGCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (242/249)  IGHV3-74*01  137  ................T......................G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  G  Y  C  N  D  G  
                    Query_4556   181  AGAACACCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAAAGGGGGCTATTGTAATGATGGTA  270
V  97.2% (242/249)  IGHV3-74*01  227  .......G..........................................................G..---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  81.5% (22/27)    IGHD2-8*01   5    --------------------------------------------------------------------------.......C.A.....G  20

                                      --CDR3-IMGT----------------------------->                                 
                                      M  C  Y  T  P  V  Y  Y  Y  S  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_4556   271  TGTGCTACACCCCCGTCTACTACTACTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  344
D  81.5% (22/27)    IGHD2-8*01   21   .A.....T...---------------------------------------------------------------  31
J  96.6% (56/58)    IGHJ6*02     5    ----------------...........A...................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_288860

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            363     2e-102
IGHD3-3*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGTAGTCAAG	ACGATTTTTGGAGTGGTT	TGTTCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTAGTCAAGACGATTTTTGGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTC	ARDGSQDDFWSGLFHYYYGMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  P  P  G  K  G  L  
                    Query_4557  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGGTATTGGATGAGTTGGGTCCGCCAACCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-7*03  47   ..............................................C...........C...........GG..................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  G  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_4557  91   AGTGGGTGGGCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (241/250)  IGHV3-7*03  137  .........C..............................................A.................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><---------------------------
                                     K  N  S  V  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  Q  D  D  F  
                    Query_4557  181  AGAACTCAGTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAGAGATGGTAGTCAAGACGATTTTT  270
V  96.4% (241/250)  IGHV3-7*03  227  ........C........C..................................G.................--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-3*01  6    ---------------------------------------------------------------------------------.........  14

                                     -CDR3-IMGT--------------------------->                                 
                                     W  S  G  L  F  H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4557  271  GGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  100.0% (18/18)   IGHD3-3*01  15   .........--------------------------------------------------------------  23
J  96.4% (54/56)    IGHJ6*02    7    ---------------.......C..C.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_322804

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           350     8e-99
IGHD3-10*01                                                                                           14.1    8.7  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAAGAATTGAGGTGACGGCGCTTTCGGC	TTCGGGG	CTGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAAGAATTGAGGTGACGGCGCTTTCGGCTTCGGGGCTGATTTTTGACCGC	ARGRIEVTALSASGLIFDR	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  G  D  Y  F  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_4558   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACCAGTGGTGATTACTTCTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*01  49   ........................................G........G.....A.....G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  N  S  G  N  T  Y  Y  N  P  S  L  K  S  L  V  T  M  S  V  D  T  S 
                    Query_4558   91   CTGGAGTGGATTGGGTACATCTCTAACAGTGGGAACACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATGTCAGTGGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*01  139  ......................A.T.........G.......................................A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  R  S  M  T  A  A  N  T  A  V  Y  Y  C  A  R  G  R  I  E  V  T  A 
                    Query_4558   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTATGACTGCCGCGAACACGGCCGTGTATTATTGTGCGAGAGGAAGAATTGAGGTGACGGCG  270
V  94.8% (237/250)  IGHV4-31*01  229  ..........................C...G...........G................C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       L  S  A  S  G  L  I  F  D  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4558   271  CTTTCGGCTTCGGGGCTGATTTTTGACCGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  100.0% (7/7)     IGHD3-10*01  13   --------.......-------------------------------------------------  19
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_288865

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     5e-96
IGHD6-19*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAGATATCTCC	TAGCAGTGGCTGGT	CAACCCCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGATATCTCCTAGCAGTGGCTGGTCAACCCCTCTATTTGACTAC	ARQISPSSGWSTPLFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  T  Y  T  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_4559   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTACCTATACCATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (233/248)  IGHV3-21*01  47   ....................G........................G.....G....A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  S  F  I  N  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4559   91   AGTGGGTCTCATCCATCAGTAGTAGAGGTAGTTTCATAAATTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (233/248)  IGHV3-21*01  137  ................T........TA......A....T.C............G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  I  S  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  S  S  G  
                    Query_4559   181  AGAACTCACTGTATCTGCAAATAAGCAGCCTGAGAGGCGAGGACACGGCTGTTTATTACTGTGCGAGACAGATATCTCCTAGCAGTGGCT  270
V  94.0% (233/248)  IGHV3-21*01  227  ......................G.A...........C...............G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD6-19*01  6    -------------------------------------------------------------------------------...........  16

                                      GT-------------------->                                  
                                      W  S  T  P  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4559   271  GGTCAACCCCTCTATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (14/14)   IGHD6-19*01  17   ...------------------------------------------------------  19
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_288864

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           307     1e-85
IGHD5-12*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAAAA	CGGGCA	GGATATAGTGACTAC	AACGCGCAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAAACGGGCAGGATATAGTGACTACAACGCGCAGGACTAC	VKRAGYSDYNAQDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	248	6	4	2	0	66.7
Total	N/A	N/A	248	222	26	0	89.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  A  L  R  W  V  R  Q  P  P  G  K  G  L  
                    Query_4560   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGTTATGCATTGCGCTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGG  90
V  89.5% (222/248)  IGHV3-30*18  47   ........................................C..T..C....GCA...A.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  A  V  I  S  Y  D  G  V  T  K  H  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  S  
                    Query_4560   91   CGTGGGTGGCAGTTATATCATATGATGGAGTTACTAAACACTATGCAGACTCCGTGACGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  89.5% (222/248)  IGHV3-30*18  137  A............................AG..A....T..................A................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  E  M  N  S  L  R  S  D  D  T  A  V  Y  F  C  V  K  R  A  G  Y  S  D  Y  
                    Query_4560   181  AGAACACCCTTTATTTGGAAATGAACAGCCTGAGAAGTGACGACACGGCTGTCTATTTTTGTGTAAAACGGGCAGGATATAGTGACTACA  270
V  89.5% (222/248)  IGHV3-30*18  227  .......G..G...C..C.................GC...G...........G....AC....CG...----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (14/15)    IGHD5-12*01  3    --------------------------------------------------------------------------..........G....-  17

                                      ------------->                                  
                                      N  A  Q  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_4560   271  ACGCGCAGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  318
J  97.5% (39/40)    IGHJ4*02     9    --------....................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_123973

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGACC	ARGDYDIGWT	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  L  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_4561   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCCTTACTCACTACTGGAGCTGGATTCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  91.8% (224/244)  IGHV4-59*01  49   .......................................AG..G.T................C.................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_4561   91   TGGATTGGATATATCTATTACAGTGGGACCACCACTTATAACCCTTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  91.8% (224/244)  IGHV4-59*01  139  ........G...................G.....AC..C.....C..................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  T  W 
                    Query_4561   181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGACCTGG  270
V  91.8% (224/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (36/36)   IGHJ5*02     16   -------------------------------------------------------------------------------------.....  20

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_4561   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (36/36)   IGHJ5*02     21   ...............................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_251125

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           315     5e-88
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTTTGT	TAGTAATGGCTTTTACTAC	G	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTTTGTTAGTAATGGCTTTTACTACGACTGGTACTTCGATCTC	ARGFVSNGFYYDWYFDL	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	21	3	0	87.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	231	216	15	0	93.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  N  Y  N  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  
                    Query_4562   14   GTGCAGCCTCTGGATTCACCTTCAGTAACTATAACATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAATGGGTCTCATCGATTA  103
V  93.5% (216/231)  IGHV3-21*01  65   ...........................G.....G....A..................................G...........C....  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  T  S  D  Y  I  Y  Y  L  D  S  V  K  G  R  F  T  I  S  R  D  N  A  Q  N  S  L  H  L  
                    Query_4562   104  GTAGTACTAGTGATTACATATACTACTTGGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCCAGAACTCACTGCATCTGC  193
V  93.5% (216/231)  IGHV3-21*01  155  ......G....AG.............GCA..........................................A...........T......  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><--------------------CDR3-IMGT----------------
                                      Q  M  T  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  F  V  S  N  G  F  Y  Y  D  W  Y  F  
                    Query_4562   194  AAATGACCAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGGGTTTGTTAGTAATGGCTTTTACTACGACTGGTACTTCG  283
V  93.5% (216/231)  IGHV3-21*01  245  ......A...........................G................---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  84.2% (16/19)    IGHD3-22*01  13   ----------------------------------------------------------.....G...T.A.......-------------  31
J  95.9% (47/49)    IGHJ2*01     3    ------------------------------------------------------------------------------............  14

                                      ---->                                
                                      D  L  W  G  R  G  T  L  L  T  V  S  S
                    Query_4562   284  ATCTCTGGGGCCGTGGCACCCTGCTAACTGTCTCCTC  320
J  95.9% (47/49)    IGHJ2*01     15   .......................G.C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_123971

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            302     3e-84
IGHD2-15*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCATTGTGGA	AGTGGTGG	CTGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCATTGTGGAAGTGGTGGCTGTTTCTACTTTGACATC	ARVHCGSGGCFYFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	56	27	21	6	0	77.8
FR2-IMGT	57	107	51	46	5	0	90.2
CDR2-IMGT	108	128	21	17	4	0	81
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	221	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  S  D  S  I  S  G  S  D  W  W  T  W  I  R  Q  P  P  G  K  G  
                    Query_4563   1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTAGTGACTCCATCAGCGGTTCTGACTGGTGGACTTGGATCCGCCAGCCCCCAGGGAAGGGGC  90
V  88.8% (221/249)  IGHV4-4*02   47   ..A.....TCC...A..............G...G..........A..AG.A.........G....G........................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  H  H  S  A  D  T  H  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  N  S  
                    Query_4563   91   TGGAGTGGATCGGAGAGATCCATCATAGTGCGGACACCCACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAACTCTA  180
V  88.8% (221/249)  IGHV4-4*02   137  ..........T..G..A...T.........G.AG....A..............................................G..C.  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  E  L  R  S  V  T  A  A  D  A  A  L  Y  Y  C  A  R  V  H  C  G  S  G  G  
                    Query_4563   181  AGAACCAATTCTCCCTGGAGCTGAGGTCTGTGACCGCCGCGGACGCGGCCCTGTATTACTGTGCGAGAGTTCATTGTGGAAGTGGTGGCT  270
V  88.8% (221/249)  IGHV4-4*02   227  .......G.........A.......C..................A.....G..................---------------------  295
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD2-15*01  11   --------------------------------------------------------------------------------........--  18

                                      ---------------->                                  
                                      C  F  Y  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4563   271  GTTTCTACTTTGACATCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  95.7% (45/47)    IGHJ4*02     2    ----..........TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_50768

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           396     2e-112
IGHD3-9*01                                                                                            12.2    37    
IGHJ5*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-9*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAGGGGCCTACAGGGAATAG	TTGACT	CCCCAAATC	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAGGGGCCTACAGGGAATAGTTGACTCCCCAAATCACAACTGGTTCGACTCC	ARDRGLQGIVDSPNHNWFDS	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  V  S  G  G  T  F  S  N  Y
                    Query_4564   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGTTTCTGGAGGCACCTTCAGCAACTA  90
V  93.5% (272/291)  IGHV1-69*01  6    ..................G..............................................C....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  G  I  I  P  I  F  G  T  G  G  Q  A  E
                    Query_4564   91   TGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGCGGGATCATCCCTATCTTTGGGACAGGAGGCCAGGCAGA  180
V  93.5% (272/291)  IGHV1-69*01  96   ..C...........................................A....A....................T....C.AA.T.C...C.  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  D  R  V  T  F  T  A  D  E  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  E  D  T  A
                    Query_4564   181  GAGGTTCCAGGACAGAGTCACTTTTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGCGCAGCCTGAGATCTGAGGACACGGC  270
V  93.5% (272/291)  IGHV1-69*01  186  ..A........G.........GA.........................................A.........................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        V  Y  Y  C  A  R  D  R  G  L  Q  G  I  V  D  S  P  N  H  N  W  F  D  S  W  G  Q  G  T  L
                    Query_4564   271  CGTCTATTACTGTGCGAGAGACAGGGGCCTACAGGGAATAGTTGACTCCCCAAATCACAACTGGTTCGACTCCTGGGGCCAGGGAACCCT  360
V  93.5% (272/291)  IGHV1-69*01  276  ...G.................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-9*01   14   -----------------------------------------......-------------------------------------------  19
J  98.0% (50/51)    IGHJ5*01     1    --------------------------------------------------------.........................A........  34

                                                       
                                        V  T  V  S  S  
                    Query_4564   361  GGTCACCGTCTCCTCAG  377
J  98.0% (50/51)    IGHJ5*01     35   .................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_95323

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           339     2e-95
IGHD3-9*01                                                                                            44.9    5e-09
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGACCTCA	TACGATATTTTGACTGGTTATTA	ACAGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGACCTCATACGATATTTTGACTGGTTATTAACAGCTTTTGACTAC	ARGDLIRYFDWLLTAFDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  R  G  Y  S  W  T  W  I  H  Q  P  P  G  K  G  L  E 
                    Query_4565   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCGTTCAGAGGTTACTCCTGGACCTGGATCCACCAGCCCCCAGGGAAGGGGCTGGAG  90
V  94.3% (231/245)  IGHV4-34*01  49   ...................................C.....T.......A.....G........G.........................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  D  Y  S  G  N  T  D  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_4565   91   TGGATTGGGGAAATCGATTATAGTGGAAACACCGACTACAGTCCGTCCCTCAAAAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  94.3% (231/245)  IGHV4-34*01  139  ...............A..C.........G....A......AC...........G....................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  L  I  R  Y  F  D  W 
                    Query_4565   181  CAGTTCTCCCTGAAGATGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCGACCTCATACGATATTTTGACTGG  270
V  94.3% (231/245)  IGHV4-34*01  229  ...............C....C............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (23/23)   IGHD3-9*01   5    -------------------------------------------------------------------------.................  21

                                      -------------------->                                  
                                       L  L  T  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4565   271  TTATTAACAGCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  325
D  100.0% (23/23)   IGHD3-9*01   22   ......-------------------------------------------------  27
J  97.7% (42/43)    IGHJ4*02     6    ------------................................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_50769

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           335     4e-94
IGHD2-21*02                                                                                           18.0    0.65 
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACTG	GGTGGGGACTACTAT	GGTCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTC	VRRLGGDYYGPFEF	281	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	67	56	49	7	0	87.5
CDR1-IMGT	68	91	24	19	5	0	79.2
FR2-IMGT	92	142	51	47	4	0	92.2
CDR2-IMGT	143	166	24	20	4	0	83.3
FR3-IMGT	167	280	114	104	10	0	91.2
CDR3-IMGT (germline)	281	287	7	6	1	0	85.7
Total	N/A	N/A	276	245	31	0	88.8


Alignments

                                      <-----------------------FR1-IMGT-----------------------><-------CDR1-IMGT------><---------
                                         C  A  E  V  K  K  P  G  E  S  L  E  I  S  C  M  A  Y  G  Y  A  F  N  D  Y  W  I  G  W  
                    Query_4566   12   CTTGTGCAGAAGTGAAAAAGCCCGGGGAGTCTCTGGAGATCTCCTGTATGGCTTATGGATACGCCTTTAACGACTACTGGATCGGCTGGG  101
V  88.8% (245/276)  IGHV5-51*01  20   ..G.A.....G........................A............A..G..C.......AG.....C.AG.................  109
                                         G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W  I  G  W  

                                      -----------FR2-IMGT---------------------><-------CDR2-IMGT------><------------------------
                                      V  R  Q  K  P  E  K  G  L  D  W  M  G  V  I  Y  P  D  D  L  D  T  T  Y  S  P  S  F  Q  G  
                    Query_4566   102  TGCGCCAGAAGCCCGAGAAAGGCCTGGATTGGATGGGGGTCATCTATCCTGATGACCTTGATACGACATACAGTCCGTCCTTCCAAGGCC  191
V  88.8% (245/276)  IGHV5-51*01  110  .........T.....G............G.........A............G....TC......C.G......C................  199
                                      V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S  F  Q  G  

                                      ----------------------------FR3-IMGT----------------------------------------------------><
                                      Q  V  T  I  S  V  D  K  S  I  N  T  I  Y  L  R  W  S  S  L  K  A  S  D  P  A  M  Y  Y  C  
                    Query_4566   192  AGGTCACAATCTCAGTCGACAAGTCCATCAACACCATCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACCCCGCCATGTATTATTGTG  281
V  88.8% (245/276)  IGHV5-51*01  200  .......C.......C..............G....GC........A.........................A.............C....  289
                                      Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M  Y  Y  C  

                                      ----------------CDR3-IMGT--------------->                                  
                                      V  R  R  L  G  G  D  Y  Y  G  P  F  E  F  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_4566   282  TGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  356
V  88.8% (245/276)  IGHV5-51*01  290  C.....---------------------------------------------------------------------  295
                                      A  R                                                                       
D  86.7% (13/15)    IGHD2-21*02  11   -----------.....T....G....-------------------------------------------------  25
J  93.0% (40/43)    IGHJ4*02     6    --------------------------------.....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_137318

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            293     2e-81
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	53	27	20	4	3	74.1
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	249	220	26	3	88.4


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  
                    Query_4567   1    GGTCCCTGAGACTCTCCTGCATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGC  87
V  88.4% (220/249)  IGHV4-4*02   47   ..A.....TCC...A.....GC.........T...TCC......A..AG........GG.......................G.......  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  
                    Query_4567   88   TGGAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCA  177
V  88.4% (220/249)  IGHV4-4*02   137  .........................T......A................................G.......A................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G  
                    Query_4567   178  AGAATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGTGGGTAGCAGTGGCT  267
V  88.4% (220/249)  IGHV4-4*02   227  ....CC.GT..........G....GC..........................G................---------------------  295
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD6-19*01  6    -------------------------------------------------------------------------------...........  16

                                      ---------->                                
                                      W  L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_4567   268  GGCTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  310
D  100.0% (13/13)   IGHD6-19*01  17   ..-----------------------------------------  18
J  95.0% (38/40)    IGHJ4*02     7    ---......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_251121

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           329     3e-92
IGHD2-8*01                                                                                            12.2    31   
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TAATGG	CCCGACTGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGGCCCGACTGAACTACGGCATGGACGTC	ARLMARLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  L  T  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_4568   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCCTCACCAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCCGGGAAGGGACTGGAA  90
V  93.0% (227/244)  IGHV4-59*08  49   ..................A............G....A...GT..................A.............A..............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  R  P  N  N  N  P  S  L  R  S  R  V  T  I  S  V  D  A  S  K  N 
                    Query_4568   91   TGGATTGAGTATATCTATTACAGAGGGCGTCCCAACAACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACGCGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*08  139  .......G...............T...A.CA.....T...............A.........................A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  A  R  L  N  Y  G  M 
                    Query_4568   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACTAATGGCCCGACTGAACTACGGCATG  270
V  93.0% (227/244)  IGHV4-59*08  229  ...................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-8*01   13   ----------------------------------------------------------------......--------------------  18
J  94.0% (47/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_4568   271  GACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCGTCA  309
J  94.0% (47/50)    IGHJ6*02     24   .............A.....................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_131992

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           310     1e-86
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGGGTATGA	ATTACTAC	CGGCTGCCAGTAATATA	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGGGTATGAATTACTACCGGCTGCCAGTAATATAATGGACGCC	ARVGYELLPAASNIMDA	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  F  R  G  Y  L  W  S  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_4569   1    ACCCTGTCCCTCACCTGCGCTGTATCTGGTGGGTCCTTCAGAGGTTACCTCTGGAGTTGGATCCGCCAGGCCCCAGGGAAGGGGCTGGAG  90
V  90.6% (221/244)  IGHV4-34*01  49   .......................C.A...............T......TA......C............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  T  N  H  R  G  S  T  N  Y  N  P  S  L  K  S  R  V  V  I  S  V  G  T  S  K  N 
                    Query_4569   91   TGGATTGGGGAAACCAATCATAGAGGATCCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCGTCATCTCAGTTGGCACGTCCAAAAAC  180
V  90.6% (221/244)  IGHV4-34*01  139  .............T.........T...AG..................................AC...A.....A.A.........G...  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  G  Y  E  L  L  P  A  A 
                    Query_4569   181  CAGTTCTCCTTGAGGCTGACCTCAGTGACCGCCGCGGACACGGCTGTCTATTATTGTGCGAGAGTGGGGTATGAATTACTACCGGCTGCC  270
V  90.6% (221/244)  IGHV4-34*01  229  .........C...A.....G...T.......................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-22*01  24   --------------------------------------------------------------------------........--------  31

                                      ----------------->                                 
                                       S  N  I  M  D  A  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4569   271  AGTAATATAATGGACGCCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  321
J  97.6% (41/42)    IGHJ6*02     21   ---------.......T..................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_312085

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           405     4e-115
IGHD2-21*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	ATTTTGGTGG	ATAGAGATAGAGTTCC	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTC	ARGGFWWIEIEFRMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  Y 
                    Query_4570   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACCGACTAT  91
V  94.8% (274/289)  IGHV1-18*01  7    .............................................................................C......AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  W  I  S  A  Y  T  G  N  T  K  N  A  Q 
                    Query_4570   92   GGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGATGGATCAGCGCTTACACTGGTAATACAAAAAATGCACAA  181
V  94.8% (274/289)  IGHV1-18*01  97   .......G.....................................A.....................A......C.....CT.......G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  V  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_4570   182  AAAGTCCAGGGCAGAGTGACCATGACCACAGACACATCCACGAGAACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (274/289)  IGHV1-18*01  187  ..GC.............C..........................C...............C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  G  G  F  W  W  I  E  I  E  F  R  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_4570   272  GTGTATTACTGTGCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  361
V  94.8% (274/289)  IGHV1-18*01  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD2-21*01  6    -----------------------...G......---------------------------------------------------------  15
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------.........................................  59

                                         
                                       S 
                    Query_4570   362  TCA  364
J  100.0% (44/44)   IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_158051

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           321     7e-90
IGHD2-15*01                                                                                           18.0    0.58 
IGHJ3*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTGTAGTGG	GAATACTTGCTACACG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTGTAGTGGGAATACTTGCTACACGGATGCTTTTGATATC	ARHCSGNTCYTDAFDI	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  L  S  P  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_4571   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCTTTGAGTCCTTACTACTGGAGCTGGGTCAGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*08  49   ..................A............G...CA.C...AG................A..C..........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  T  R  V  T  L  S  V  D  T  S  K  Q 
                    Query_4571   91   TGGATTGGCTATATCTATTACAGGGGGAACACCAACTACAACCCCTCCCTCAAGACTCGAGTCACCTTATCAGTTGACACGTCCAAGCAG  180
V  91.8% (225/245)  IGHV4-59*08  139  ........G..............T....G..........................G..........A.......A............A.C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  C  S  G  N  T  C  Y  T 
                    Query_4571   181  CAGTTCTCCCTGAAATTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATTGTAGTGGGAATACTTGCTACACG  270
V  91.8% (225/245)  IGHV4-59*08  229  ..............GC...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD2-15*01  7    -----------------------------------------------------------------.........----------------  15

                                      -------------->                                  
                                       D  A  F  D  I  W  S  Q  G  T  T  V  T  V  S  S  
                    Query_4571   271  GATGCTTTTGATATCTGGAGCCAAGGGACCACGGTCACCGTCTCTTCAG  319
J  93.9% (46/49)    IGHJ3*02     2    ..................G..........A.T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_217069

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            388     5e-110
IGHD6-19*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	N/A	CAGTGGCTGGT	TAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGCAGTGGCTGGTTAATTGACTAC	AHSSGWLIDY	263	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	110	4	0	96.5
CDR3-IMGT (germline)	263	270	8	8	0	0	100
Total	N/A	N/A	270	259	11	0	95.9


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  T  A  V  G  V  H  W  I  R
                    Query_4572   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTACTGCAGTGGGTGTACACTGGATCCG  90
V  95.9% (259/270)  IGHV2-5*01   30   .................................................................G..G.........GGG.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  L  Y  W  N  D  D  N  H  Y  S  P  S  L  K  S  R  L  T
                    Query_4572   91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCCTTTATTGGAATGATGATAACCACTACAGCCCATCTCTGAAGAGCAGGCTTAC  180
V  95.9% (259/270)  IGHV2-5*01   120  .....................................A...................G.G...........................C..  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        V  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  V  D  P  V  D  T  A  T  Y  Y  C  A  H  S
                    Query_4572   181  CGTCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACGTGGACCCTGTGGACACAGCCACATATTACTGTGCACACAG  270
V  95.9% (259/270)  IGHV2-5*01   210  .A...............................................A........................................  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                      ---CDR3-IMGT--------->                                  
                                        S  G  W  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4572   271  CAGTGGCTGGTTAATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  326
D  100.0% (11/11)   IGHD6-19*01  9    ...........---------------------------------------------  19
J  100.0% (42/42)   IGHJ4*02     7    --------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_163228

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           324     8e-91
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAAG	AGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQEWLPGDWYFDL	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  R  N  Y  W  S  W  I  R  Q  P  P  G  E  R  L  E 
                    Query_4573   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCACTAGAAACTACTGGAGCTGGATTCGGCAGCCCCCAGGGGAGAGACTGGAG  90
V  92.6% (225/243)  IGHV4-59*08  49   ...................C...........G........G...TT................C...............A..G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  P  K  N 
                    Query_4573   91   TGGATAGCGTATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGCCCAAGAAC  180
V  92.6% (225/243)  IGHV4-59*08  139  .....T.G.......T...........AG...........................................G........T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  F  L  P  A  V  Q  E  W  L 
                    Query_4573   181  CAGTTCTCCCTGAAGATGACCTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTG  270
V  92.6% (225/243)  IGHV4-59*08  229  ...............C...G.........................G.................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  10   ----------------------------------------------------------------------------------........  17

                                      ----------------------->                                  
                                       P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_4573   271  CCAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCGTCAG  328
J  96.1% (49/51)    IGHJ2*01     3    -------......................................A.......C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_217067

Length=407
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           389     2e-110
IGHD3-10*01                                                                                           18.0    0.69  
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTCCCGCCCCGCTGG	TGGTTCGGG	TTATTATGGCCCGAG	CTGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTCCCGCCCCGCTGGTGGTTCGGGTTATTATGGCCCGAGCTGCTTCGACCCC	ARGSRPAGGSGYYGPSCFDP	291	350	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	16	8	0	66.7
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	272	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  A  S  G  D  S  F  S 
                    Query_4574   3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGGCTTCAGGGGACTCCTTCAGT  92
V  92.2% (272/295)  IGHV1-69*01  1    .......................G...........................................A......T..A.G.A.......C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       G  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  I  P  T  L  G  S  A  N  H 
                    Query_4574   93   GGGTATGGAATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGTGATCATCCCTACCCTTGGTTCAGCAAACCAC  182
V  92.2% (272/295)  IGHV1-69*01  91   A.C....CT....G............................................G...........T.T.....A........T..  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  K  G  R  V  T  I  T  A  H  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  P  E  D 
                    Query_4574   183  GCACAGAAGTTCAAGGGCAGAGTCACGATTACCGCGCACGAATCCACGAGCACAGCCTACATGGAGTTGAGCAGCCTGAGACCTGAAGAC  272
V  92.2% (272/295)  IGHV1-69*01  181  ............C.......................G.............................C..............T....G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  M  Y  Y  C  A  R  G  S  R  P  A  G  G  S  G  Y  Y  G  P  S  C  F  D  P  W  G  Q  G 
                    Query_4574   273  ACGGCCATGTATTACTGTGCGAGAGGTTCCCGCCCCGCTGGTGGTTCGGGTTATTATGGCCCGAGCTGCTTCGACCCCTGGGGCCAGGGA  362
V  92.2% (272/295)  IGHV1-69*01  271  ......G..................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (9/9)     IGHD3-10*01  10   -----------------------------------------.........----------------------------------------  18
J  97.9% (46/47)    IGHJ5*02     5    -----------------------------------------------------------------...G.....................  29

                                                            
                                       T  L  V  T  V  S  S  
                    Query_4574   363  ACCCTGGTCACCGTCTCCTCAG  384
J  97.9% (46/47)    IGHJ5*02     30   ......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39867768


Query= Query_198602

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCAGTGC	TATTACGATTTTTGGAGTGGT	CATC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATCCAGTGCTATTACGATTTTTGGAGTGGTCATCCTACTTCGATATGGACGTC	ARDPVLLRFLEWSSYFDMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  N  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4575   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAACAATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-33*01  47   .............................................G.T...G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  N  D  G  V  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4575   91   AATGGGTGGCAGTTATTTGGAATGATGGAGTTAAAAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCG  180
V  94.4% (236/250)  IGHV3-33*01  137  .G..............A...T........AG...T......................................................A  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      E  N  T  L  Y  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  R  D  P  V  L  L  R  F  
                    Query_4575   181  AGAACACCCTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTATATTACTGTGCGCGAGATCCAGTGCTATTACGATTTT  270
V  94.4% (236/250)  IGHV3-33*01  227  .......G............................C...............G............A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (21/21)   IGHD3-3*01   2    ------------------------------------------------------------------------------............  13

                                      R3-IMGT------------------------>                                 
                                      L  E  W  S  S  Y  F  D  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4575   271  TGGAGTGGTCATCCTACTTCGATATGGACGTCTGGGGCCAAGGGACTACGGTCACCGTCTCCTCA  335
D  100.0% (21/21)   IGHD3-3*01   14   .........--------------------------------------------------------  22
J  94.2% (49/52)    IGHJ6*02     11   -------------.....A..G........................C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_198600

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           333     1e-93
IGHD7-27*01                                                                                           14.1    8.2  
IGHJ5*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGTATCGACT	CTGGGGA	N/A	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGTATCGACTCTGGGGAACAACTGGTTCGACCCC	ARQVSTLGNNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  T  L  E 
                    Query_4576   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAAACACTGGAG  90
V  93.5% (229/245)  IGHV4-59*08  49   ...........................................G....................................GGG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  H  N  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  S  S  K  S 
                    Query_4576   91   TGGATTGGTCATATCCACAACAGTGGGAGCACCAACTACAACCCCTCCCTCCGGAGTCGAGTCACCATATCAGTGGACTCGTCCAAGAGC  180
V  93.5% (229/245)  IGHV4-59*08  139  ........GT.....T.TT................................AA.....................A...A.........A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  V  S  T  L  G  N  N  W 
                    Query_4576   181  CAGTTCTCCCTGAGGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACAAGTATCGACTCTGGGGAACAACTGG  270
V  93.5% (229/245)  IGHV4-59*08  229  .............A.C.................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD7-27*01  5    ---------------------------------------------------------------------------.......--------  11
J  98.0% (50/51)    IGHJ5*02     1    ----------------------------------------------------------------------------------........  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4576   271  TTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  313
J  98.0% (50/51)    IGHJ5*02     9    ......................................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_198607

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4577   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_4577   91   CTCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..G...............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G 
                    Query_4577   181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .........................G................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4577   271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_217062

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           325     3e-91
IGHD2-15*01                                                                                           25.7    0.003
IGHJ6*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACTGGC	ATATTGTAGTGGT	ATGAGTTGCACCTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACTGGCATATTGTAGTGGTATGAGTTGCACCTCTTACTACTACGCTATGGACGTC	ARVLAYCSGMSCTSYYYAMDV	230	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	23	1	0	95.8
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	109	5	0	95.6
CDR3-IMGT (germline)	230	236	7	7	0	0	100
Total	N/A	N/A	224	216	8	0	96.4


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_4578   13   GTCTGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCTGTTATATGGTATGA  102
V  96.4% (216/224)  IGHV3-33*01  72   ....................G......................................................A..............  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  N  N  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_4578   103  TGGAAATAATAAATACTATGGAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAACTCCAAGAACACGCTGTATTTGCAAATGAA  192
V  96.4% (216/224)  IGHV3-33*01  162  .....G..............C..................A....................T..................C..........  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------------------CDR3-IMGT-----------------
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  L  A  Y  C  S  G  M  S  C  T  S  Y  Y  Y  A
                    Query_4578   193  CAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGTACTGGCATATTGTAGTGGTATGAGTTGCACCTCTTACTACTACGC  282
V  96.4% (216/224)  IGHV3-33*01  252  ...........................G................----------------------------------------------  295
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (13/13)   IGHD2-15*01  4    ---------------------------------------------------.............--------------------------  16
J  98.1% (53/54)    IGHJ6*02     9    -------------------------------------------------------------------------------..........G  19

                                      --------->                                 
                                        M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4578   283  TATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  325
J  98.1% (53/54)    IGHJ6*02     20   ...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_198605

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           297     7e-83
IGHD3-9*01                                                                                            12.2    31   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCCCGAGGGTGGCAG	TGACTTGTT	CCTTTCG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATCCCGAGGGTGGCAGTGACTTGTTCCTTTCGTAC	VKDPEGGSDLFLSY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	24	16	5	3	66.7
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	250	222	25	3	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  I  F  R  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4579   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTTATCTTCAGAAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  88.8% (222/250)  IGHV3-64*05  47   ..................................C.C......T..C...........................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  I  S  T  V  S  S  N  E  Y     T  Y  Y  A  D  S  V  K  G  R  F  S  V  S  R  D  N  S  
                    Query_4579   91   AATCTATTTCGACTGTCAGTAGTAATGAGTATA---CATACTACGCAGACTCAGTGAAGGGCAGATTCTCCGTTTCCAGAGACAACTCCA  177
V  88.8% (222/250)  IGHV3-64*05  137  ...A.G....AG..A.T..........G.GG..GCA................................A..A.C...........T....  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  M  L  Y  L  Q  M  S  S  L  R  P  E  D  S  G  V  Y  Y  C  V  K  D  P  E  G  G  S  D  
                    Query_4579   178  AGAACATGCTTTATCTTCAAATGAGCAGTCTGAGACCTGAGGACTCGGGTGTCTATTATTGTGTGAAAGATCCCGAGGGTGGCAGTGACT  267
V  88.8% (222/250)  IGHV3-64*05  227  ......C...G...G....................G........A...C...G.....C...........--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  88.9% (8/9)      IGHD3-9*01   15   -------------------------------------------------------------------------------------.....  19

                                      ------------->                                
                                      L  F  L  S  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4579   268  TGTTCCTTTCGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  313
D  88.9% (8/9)      IGHD3-9*01   20   G...------------------------------------------  23
J  100.0% (35/35)   IGHJ4*02     12   -----------...................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_217060

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           350     8e-99
IGHD6-13*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGT	GGTATAGCAGCA	CCCTTAAA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGTGGTATAGCAGCACCCTTAAATACTTTGACTAC	ARVWYSSTLKYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  I  S  G  T  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4580   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCATCAGTGGTACTCACTATTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*03  49   ........................................G.......GG.T....C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  I  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4580   91   CTGGAGTGGATTGGCTACATTTATTATAGTGGGATCACCTACTACAATCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*03  139  ..............G.....C.....C.......G............C..........................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  L  T  A  A  D  T  A  V  Y  F  C  A  R  V  W  Y  S  S  T  L 
                    Query_4580   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCCCTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGTGTGGTATAGCAGCACCCTT  270
V  94.8% (237/250)  IGHV4-31*03  229  .............................TG...........................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD6-13*01  2    -------------------------------------------------------------------------............-----  13

                                      -------------->                                
                                       K  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4580   271  AAATACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  317
J  100.0% (44/44)   IGHJ4*02     3    ---............................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_247940

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD6-6*01                                                                                            16.1    2.2  
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-6*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCCGATTCG	GCTCGTCC	GGGGACCTGTATACCTAT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCCGATTCGGCTCGTCCGGGGACCTGTATACCTATTTCGACCCC	ARDLRFGSSGDLYTYFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  A  T  Y  F  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_4581   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTGTCCATCGCTACTTACTTCTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   ...............................GC......AG..G.....A...................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  S  I  Y  Y  T  G  I  T  K  Y  N  P  S  L  K  S  R  V  T  I  L  L  D  T  S  K  S 
                    Query_4581   91   TGGATTGCGTCTATCTATTACACTGGGATCACCAAGTATAACCCCTCCCTCAAGAGTCGAGTCACCATATTACTAGACACGTCCAAGAGC  180
V  92.2% (226/245)  IGHV4-59*01  139  .......G..A...........G.....G......C..C...............................C.G...............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  E  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  R  F  G  S  S  G  D 
                    Query_4581   181  CAGTTCTCCCTGGAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATCTCCGATTCGGCTCGTCCGGGGAC  270
V  92.2% (226/245)  IGHV4-59*01  229  ............A......G...........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-6*01   11   ----------------------------------------------------------------------------........------  18

                                      -------------------->                                  
                                       L  Y  T  Y  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_4581   271  CTGTATACCTATTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  325
J  97.7% (42/43)    IGHJ5*02     9    ------------.........................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_34728

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           316     2e-88
IGHD1-26*01                                                                                           18.0    0.55 
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGA	TGGGAGCTA	T	TTCAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATGATGGGAGCTATTTCAACCCC	VRDDGSYFNP	239	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	48	3	0	94.1
CDR2-IMGT	101	124	24	22	2	0	91.7
FR3-IMGT	125	238	114	106	8	0	93
CDR3-IMGT (germline)	239	246	8	7	1	0	87.5
Total	N/A	N/A	232	217	15	0	93.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  V  P  G  K  G  L  E  W  V  S  R  I  
                    Query_4582   15   GTGCAGCCTCTGGATTCACCTTCAGTACCTACTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGGCTGGAATGGGTCTCACGTATTA  104
V  93.5% (217/232)  IGHV3-74*01  65   ...........................G..........................C.................TG................  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  S  D  G  S  G  T  T  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  P  K  N  T  L  H  L  
                    Query_4582   105  ATAGTGATGGCAGTGGCACAACCTACGCGGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAACCCCAAGAATACGCTGCATCTGC  194
V  93.5% (217/232)  IGHV3-74*01  155  ..........G...A......G.................A............................G.......C......T......  244
                                      N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  

                                      -------------------------------------------><----------CDR3-IMGT--------->                
                                      Q  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  V  R  D  D  G  S  Y  F  N  P  W  G  Q  G  T  
                    Query_4582   195  AAATGAACAGTCTGAGAGTCGAGGACACGGCTGTATATTTCTGTGTAAGAGATGATGGGAGCTATTTCAACCCCTGGGGCCAGGGAACCC  284
V  93.5% (217/232)  IGHV3-74*01  245  ..................C...............G....A.....C......--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (9/9)     IGHD1-26*01  8    -------------------------------------------------------.........--------------------------  16
J  97.7% (42/43)    IGHJ5*02     9    -----------------------------------------------------------------...G.....................  33

                                                        
                                      L  V  T  V  S  S  
                    Query_4582   285  TGGTCACCGTCTCCTCAG  302
J  97.7% (42/43)    IGHJ5*02     34   ..................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_256329

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           413     2e-117
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	275	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  S  F  T  T  Y
                    Query_4583   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATTCAGCTTTACCACCTA  90
V  96.2% (275/286)  IGHV5-51*01  6    ..................................................................T.......A...........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_4583   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  96.2% (275/286)  IGHV5-51*01  96   ......................A.......G.............G..........................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_4583   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAGCACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  96.2% (275/286)  IGHV5-51*01  186  ....................C...................A...........................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4583   271  CGTGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.2% (275/286)  IGHV5-51*01  276  .A..............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_131994

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           397     7e-113
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TTTCCAAGGCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTCCAAGGCGACTACTCGGACTTC	ARDFQGDYSDF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  T  C  K  A  S  G  Y  P  F  S  T  Y 
                    Query_4584   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCACCTGCAAGGCTTCTGGTTACCCCTTTAGCACCTAC  91
V  93.8% (272/290)  IGHV1-18*04  7    ......................................................T....................A......C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  H  G  L  E  W  L  G  W  V  S  G  H  N  G  N  T  K  N  A  Q 
                    Query_4584   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACACGGGCTTGAGTGGCTGGGATGGGTCAGCGGTCACAATGGCAACACAAAAAATGCACAG  181
V  93.8% (272/290)  IGHV1-18*04  97   ................................A............A........A......C.T.......T........CT........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  D  R  V  T  M  T  T  D  T  S  T  T  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_4584   182  AAGTTCCAGGACAGAGTCACCATGACCACAGACACATCCACGACCACAGCGTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  93.8% (272/290)  IGHV1-18*04  187  ...C......G................................G......C.......................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  D  F  Q  G  D  Y  S  D  F  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_4584   272  GTATATTATTGTGCGAGAGATTTCCAAGGCGACTACTCGGACTTCTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  350
V  93.8% (272/290)  IGHV1-18*04  277  ..G.....C...........-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
J  91.7% (44/48)    IGHJ4*02     1    -------------------------------......TT....A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_45289

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*10                                                                                           315     5e-88
IGHD2-21*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*10	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGGGGG	ATTGTGATGGT	ATTAACTGCGTCCCCTGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGGATTGTGATGGTATTAACTGCGTCCCCTGGTACTACTATTATGGAATGCACGTC	AKGDCDGINCVPWYYYYGMHV	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	221	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  L  Y  G  G  S  F  S  G  H  Y  W  I  W  L  R  Q  S  P  G  K  G  L  E 
                    Query_4585   1    ACCCTGTCCCTCACCTGCGCTCTCTATGGTGGGTCCTTCAGTGGTCACTACTGGATTTGGCTCCGCCAGTCCCCCGGGAAGGGGCTGGAG  90
V  91.7% (221/241)  IGHV4-34*10  49   .....................G.......................T.........GC...A........C....A........A......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  K  Y  N  S  S  L  K  S  R  V  A  M  S  I  D  A  S  K  S 
                    Query_4585   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACGAAGTACAACTCGTCCCTCAAGAGTCGAGTCGCCATGTCAATAGACGCGTCCAAGAGT  180
V  91.7% (221/241)  IGHV4-34*10  139  ................................C..C......C.................A..A........G.....A.........AC  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  I  T  M  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  Y  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  G  D  C  D  G  I  N  C  V 
                    Query_4585   181  CAATTCTACCTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAAGGGGGATTGTGATGGTATTAACTGCGTC  270
V  91.7% (221/241)  IGHV4-34*10  229  ..G................G...........................G.............-----------------------------  289
                                       Q  F  Y  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (10/11)    IGHD2-21*01  6    -------------------------------------------------------------------......G....------------  16

                                      MGT-------------------------->                                 
                                       P  W  Y  Y  Y  Y  G  M  H  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_4585   271  CCCTGGTACTACTATTATGGAATGCACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  333
J  91.2% (52/57)    IGHJ6*02     6    ------........C..C..T...G...........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_45288

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD6-6*01                                                                                            14.1    9.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTC	ATTREQLVPIFDF	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	293	4	4	0	0	100
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  L  T  
                    Query_4586   3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGCAAGGGCTCTGGATATAGCTTAACCA  92
V  93.1% (271/291)  IGHV5-51*01  2    ................................................................T.....T........C.....T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  V  P  G  K  G  L  E  W  I  G  I  I  Y  P  A  D  S  E  T  K  Y  
                    Query_4586   93   GTTATTGGATCGCCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATTGGGATCATCTATCCTGCTGACTCTGAAACCAAATACA  182
V  93.1% (271/291)  IGHV5-51*01  92   .C..C.......G.............A.........................G................G.........T....G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  S  S  S  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_4586   183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCGGCCGACAAGTCCAGCAGCTCCGCCTTCTTGCAGTGGAGCAGCCTGAAGGCCTCGGACC  272
V  93.1% (271/291)  IGHV5-51*01  182  ...............................A.............T....A......A.C.............................A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      P  A  I  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4586   273  CCGCCATATATTATTGTGCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTCTGGGGGCAGGGAACCCTGGTCACCGTCTCCTCAG  362
V  93.1% (271/291)  IGHV5-51*01  272  .......G.....C.......---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -----------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------.......A......C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_45287

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGTCCCAAACC	ACTTTGGTTAGGGGA	CATAGGTCTCGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGTCCCAAACCACTTTGGTTAGGGGACATAGGTCTCGGCTTTGACTAC	AKDRPKPLWLGDIGLGFDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  L  R  S  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4587   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCCTTAGGAGCTTTGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-23*01  47   .....................C................T....C....A.........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  N  T  G  T  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  T  S  
                    Query_4587   91   AATGGGTCTCAGCTATTACTGGTAATACTGGTACCACATACTACGCAGACTCTGTGAGGGGCCGGTTCACCATCTCCAGAGACACCTCCA  180
V  92.0% (230/250)  IGHV3-23*01  137  .G................G.....G.GG.....G..................C....A..........................AT....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  R  P  K  P  L  W  
                    Query_4587   181  AGTCCACGCTGTACCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTTTATTACTGTGCGAAAGATCGTCCCAAACCACTTTGGT  270
V  92.0% (230/250)  IGHV3-23*01  227  ..AA.........T..........................G...........A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  86.7% (13/15)    IGHD3-10*01  6    ----------------------------------------------------------------------------------...A....  13

                                      -IMGT----------------------->                                  
                                      L  G  D  I  G  L  G  F  D  Y  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4587   271  TAGGGGACATAGGTCTCGGCTTTGACTACTGGGGCCAGGGAACCATGGTCACCGTCTCCTCAG  333
D  86.7% (13/15)    IGHD3-10*01  14   .C.....--------------------------------------------------------  20
J  97.7% (43/44)    IGHJ4*02     5    -------------------.........................C..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_45286

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         396     2e-112
IGHD5-12*01                                                                                           10.3    118   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	GTGGC	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGCGGCCTAC	ARVAAY	264	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	77	27	27	0	0	100
FR2-IMGT	78	128	51	49	2	0	96.1
CDR2-IMGT	129	149	21	20	1	0	95.2
FR3-IMGT	150	263	114	111	3	0	97.4
CDR3-IMGT (germline)	264	269	6	6	0	0	100
Total	N/A	N/A	269	261	8	0	97


Alignments

                                        <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                           G  L  V  K  P  S  E  T  L  S  L  N  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  V  
                    Query_4588     1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCAACTGCGCTGTCTCTGGTTACTCCATCAGCAGTGGTTACTACTGGGGCTGGGTCC  90
V  97.0% (261/269)  IGHV4-38-2*01  26   ................T...................C.................................................A...  115
                                           G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  

                                        --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                        R  Q  P  P  G  K  G  L  E  W  I  G  I  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  
                    Query_4588     91   GGCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGATTATCTACCATAGTGGGAGCACCTACTACAACCCGTCCCTCAACAGTCGAGTCA  180
V  97.0% (261/269)  IGHV4-38-2*01  116  ....................................G......T...................................G..........  205
                                        R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  

                                        ----------------------FR3-IMGT----------------------------------------------------><----CD
                                        T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  
                    Query_4588     181  CCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAACTCTGTTACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAG  270
V  97.0% (261/269)  IGHV4-38-2*01  206  .............................................G......G....................................-  294
                                        T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  
D  100.0% (5/5)     IGHD5-12*01    10   -----------------------------------------------------------------------------------------.  10

                                        R3-IMGT--->                                  
                                        V  A  A  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4588     271  TGGCGGCCTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  315
D  100.0% (5/5)     IGHD5-12*01    11   ....-----------------------------------------  14
J  97.4% (37/38)    IGHJ4*02       11   -------.................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_45285

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD6-19*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TTCCTCT	TGGCTGG	GACC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATTCCTCTTGGCTGGGACCTGATGCTTTTCAAATC	ARDSSWLGPDAFQI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4589   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGAAGTTACTACTGGAATTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ...............................G.........T.............GC.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  S  G  T  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  G  D  T  S  K  N 
                    Query_4589   91   TGGATTGGGTATATGTATTACAGTGGGACTACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGGAGACACGTCTAAGAAC  180
V  93.1% (228/245)  IGHV4-59*01  139  ..............C.............GC.....................A.....................T.........C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  F  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  L  G  P  D  A 
                    Query_4589   181  CAATTTTTCCTGACGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGGGATTCCTCTTGGCTGGGACCTGATGCT  270
V  93.1% (228/245)  IGHV4-59*01  229  ..G..C.C.....A.C.....................................C........A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD6-19*01  12   ------------------------------------------------------------------------.......-----------  18
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------------------.......  7

                                      -------->                                  
                                       F  Q  I  W  G  Q  G  T  I  V  T  V  S  S  
                    Query_4589   271  TTTCAAATCTGGGGCCAGGGGACAATTGTCACCGTGTCTTCAG  313
J  90.0% (45/50)    IGHJ3*02     8    ...G.T...........A........G........C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_45284

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           391     5e-111
IGHD2-2*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCACGG	TGTAGTAGTACCAGCTGC	CCTCCT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCACGGTGTAGTAGTACCAGCTGCCCTCCTTATGGACGTC	AKDHGVVVPAALLMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	250	0	0	100


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                     Query_4590   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  100.0% (250/250)  IGHV3-30*18  47   ..........................................................................................  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                     Query_4590   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  100.0% (250/250)  IGHV3-30*18  137  ..........................................................................................  226
                                       E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                       K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  H  G  V  V  V  P  
                     Query_4590   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATCACGGTGTAGTAGTACCAG  270
V  100.0% (250/250)  IGHV3-30*18  227  ......................................................................--------------------  296
                                       K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (18/18)    IGHD2-2*01   8    ----------------------------------------------------------------------------..............  21

                                       T------------------>                                 
                                       A  A  L  L  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                     Query_4590   271  CTGCCCTCCTTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
D  100.0% (18/18)    IGHD2-2*01   22   ....-------------------------------------------------  25
J  100.0% (43/43)    IGHJ6*02     20   ----------...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_45283

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           288     5e-80
IGHD2-15*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CC	GATATTGTGGTGGCGGTGACTGCTACTC	GGGACCGGAG	GACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCGATATTGTGGTGGCGGTGACTGCTACTCGGGACCGGAGGACCAC	ARDRYCGGGDCYSGPEDH	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	19	5	0	79.2
FR2-IMGT	51	101	51	50	1	0	98
CDR2-IMGT	102	125	24	17	7	0	70.8
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	232	208	24	0	89.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  A  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  
                    Query_4591   16   GTGCAGCCTCTGGATTCACCTTCAGTGCATATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCCTCCATTA  105
V  89.7% (208/232)  IGHV3-21*01  65   ..........................AGC...AG................................................A.......  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  N  T  Y  D  E  F  Y  A  D  S  V  K  G  R  F  T  V  Y  R  D  N  A  R  N  S  L  Y  L  
                    Query_4591   106  GTAGTAATACTTATGACGAATTCTATGCAGACTCAGTGAAGGGCCGGTTCACCGTCTACAGAGACAACGCCAGGAACTCACTGTATCTCC  195
V  89.7% (208/232)  IGHV3-21*01  155  ......G..G.AG.T..AT..A...C....................A......A...C..............A...............G.  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------------CDR3-IMGT--------------
                                      Q  M  Y  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  R  Y  C  G  G  G  D  C  Y  S  G  P  
                    Query_4591   196  AAATGTACAACCTGAGAGTCGAAGACACGGCTGTGTATTACTGTGCGAGAGACCGATATTGTGGTGGCGGTGACTGCTACTCGGGACCGG  285
V  89.7% (208/232)  IGHV3-21*01  245  .....A...G........C...G.............................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  85.7% (24/28)    IGHD2-15*01  3    ------------------------------------------------------........A....T...AG.........--------  30

                                      ------->                                  
                                      E  D  H  W  G  Q  G  P  L  V  T  V  S  S  
                    Query_4591   286  AGGACCACTGGGGCCAGGGACCCCTGGTCACCGTCTCCTCAG  327
J  95.0% (38/40)    IGHJ4*02     9    --...T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_256326

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           297     7e-83
IGHD5-12*01                                                                                           12.2    30   
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCC	GTGGAT	TAAGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCGTGGATTAAGCTTC	ATRGLSF	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	218	28	0	88.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  L  R  Q  A  P  G  K  G  P  
                    Query_4592   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGCTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  88.6% (218/246)  IGHV3-21*01  47   ........................................C.GT.G.T..AG.A...AC...G........................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  D  I  T  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_4592   91   AGTGGGTCTCATCCATTAGTAGTCGTGGAGATATCACATACTACGCGGACTCAGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  88.6% (218/246)  IGHV3-21*01  137  .......................A..A.TAG.TA..T.........A.........A.................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  S  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  T  R  G  L  S  F  W  G  
                    Query_4592   181  AGAACTCACTGTCCCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTCTTTATTACTGTGCGACCCGTGGATTAAGCTTCTGGGGCC  270
V  88.6% (218/246)  IGHV3-21*01  227  ............AT......................C...G.........G.G.............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD5-12*01  1    ---------------------------------------------------------------------......---------------  6
J  94.3% (33/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  A  Q  V  T  V  S  S  
                    Query_4592   271  AGGGAGCCCAGGTCACCGTCTCCTCAG  297
J  94.3% (33/35)    IGHJ4*02     22   .....A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_45281

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD5-18*01                                                                                           12.2    31   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCCTTTGC	ATACATGTATGG	CCCTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCCTTTGCATACATGTATGGCCCTGGCTAC	ASFAYMYGPGY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  N  F  S  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4593   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGACTCAACTTTAGCGACTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (228/245)  IGHV3-23*01  47   ............................T...T...C.......AG............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  S  S  K  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  S  S  
                    Query_4593   91   AGTGGGTCTCAGGTATTAGTGGAAGTGGTAGTAGCAAATACTACGCAGACTCCGTGAAGGGCCGGTTCATCATCTCCAGAGACAGTTCCA  180
V  93.1% (228/245)  IGHV3-23*01  137  ............C.........T......G......C................................C..............A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  A  D  D  T  A  F  Y  Y  C  A  S  F  A  Y  M  Y  G  P  
                    Query_4593   181  AGAACACGGTGTACCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCTTTTATTACTGTGCGTCCTTTGCATACATGTATGGCCCTG  270
V  93.1% (228/245)  IGHV3-23*01  227  ........C....T..........................G.........G.A............-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  83.3% (10/12)    IGHD5-18*01  5    -------------------------------------------------------------------------.....GC.....-----  16

                                      ---->                                  
                                      G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4593   271  GCTACTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  309
J  97.4% (37/38)    IGHJ4*02     11   -...........................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_178501

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD2-21*02                                                                                           16.1    2.5   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TTTG	GGTGATGACTG	GGATCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTTTGGGTGATGACTGGGATCAATACTACTTTGACTAC	ASLGDDWDQYYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	270	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  A  Q  S  G  A  E  V  K  K  T  G  E  S  L  K  I  S  C  R  C  S  G  Y  R  F  T  N  Y
                    Query_4594   1    GCAGCTGGCGCAGTCTGGAGCAGAGGTGAAAAAGACCGGGGAGTCTCTGAAGATCTCCTGTAGGTGTTCTGGATACAGGTTTACCAATTA  90
V  93.8% (270/288)  IGHV5-51*01  6    ........T.........................C...........................A.G.............C.......GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  M  G  M  M  N  P  G  D  S  D  T  R  Y  S  P
                    Query_4594   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACATGGGAATGATGAATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  93.8% (270/288)  IGHV5-51*01  96   ........G...................................GG.....G..C..CT...............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  G  Q  V  T  I  S  A  D  E  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_4594   181  GCCCTTCCAAGGCCAGGTCACCATCTCAGCCGACGAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  93.8% (270/288)  IGHV5-51*01  186  .T................................A..........C...........................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  S  L  G  D  D  W  D  Q  Y  Y  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_4594   271  CATGTATTACTGTGCGAGTTTGGGTGATGACTGGGATCAATACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  359
V  93.8% (270/288)  IGHV5-51*01  276  ..................-----------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                          
D  90.9% (10/11)    IGHD2-21*02  11   ----------------------....G......--------------------------------------------------------  21
J  97.9% (47/48)    IGHJ4*02     1    -----------------------------------------...................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_7319

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ5*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGACC	ARGDYDIGWT	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  L  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_4595   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCCTTACTCACTACTGGAGCTGGATTCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  91.8% (224/244)  IGHV4-59*01  49   .......................................AG..G.T................C.................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_4595   91   TGGATTGGATATATCTATTACAGTGGGACCACCACTTATAACCCTTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  91.8% (224/244)  IGHV4-59*01  139  ........G...................G.....AC..C.....C..................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  T  W 
                    Query_4595   181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGACCTGG  270
V  91.8% (224/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  97.2% (35/36)    IGHJ5*02     16   -------------------------------------------------------------------------------------.....  20

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_4595   271  GGCCAGGGAACCCTGGTCACCGTGTCCTCAG  301
J  97.2% (35/36)    IGHJ5*02     21   .......................C.......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_281558

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           357     1e-100
IGHD2-2*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTATCGACTGTACCAT	TACCACCTGC	CGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTATCGACTGTACCATTACCACCTGCCGTTTTGACTTC	ASLIDCTITTCRFDF	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  N  S  R  N  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_4596   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAACAGTCGTAATTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.0% (238/248)  IGHV4-39*01  49   ..................A.....................G....A...G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  N  Y  S  G  T  T  Y  Y  T  A  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_4596   91   CTGGAGTGGATTGGGAGTATCAATTATAGTGGGACCACCTACTACACCGCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  96.0% (238/248)  IGHV4-39*01  139  .....................T............G...........A.C.........................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  I  D  C  T  I  T 
                    Query_4596   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGCCTTATCGACTGTACCATTACC  270
V  96.0% (238/248)  IGHV4-39*01  229  ...........................................................C........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.0% (9/10)     IGHD2-2*01   16   --------------------------------------------------------------------------------------....  19

                                      ----------------->                                  
                                       T  C  R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4596   271  ACCTGCCGTTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  90.0% (9/10)     IGHD2-2*01   20   .G....----------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_281559

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           403     1e-114
IGHD2-8*01                                                                                            16.1    2.5   
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCCGGACT	TTGTACTA	CCTACTGCCCTTGGGG	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCCGGACTTTGTACTACCTACTGCCCTTGGGGGGACGTC	ARDPGLCTTYCPWGDV	281	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	166	21	16	5	0	76.2
FR3-IMGT	167	280	114	111	3	0	97.4
CDR3-IMGT (germline)	281	288	8	8	0	0	100
Total	N/A	N/A	288	273	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  D  N
                    Query_4597   1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTGAGTGACAA  90
V  94.8% (273/288)  IGHV3-53*01  6    ..........G......................................................................C...AG...  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  T  H  S  G  G  D  T  Y  Y  A  D  S
                    Query_4597   91   CTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAATGGGTCTCAACTACTCACAGCGGTGGTGACACATACTACGCAGACTC  180
V  94.8% (273/288)  IGHV3-53*01  96   ..........................................G.........GT..T.T.T.........AG..................  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  T  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V
                    Query_4597   181  CGTGAAGGGCCGATTCACCATCTCCAGAGACACTTCCAAGAACACTCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGT  270
V  94.8% (273/288)  IGHV3-53*01  186  ................................A............G............................................  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><-------------------CDR3-IMGT------------------>                                
                                        Y  Y  C  A  R  D  P  G  L  C  T  T  Y  C  P  W  G  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_4597   271  CTATTACTGTGCGAGAGACCCCGGACTTTGTACTACCTACTGCCCTTGGGGGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  360
V  94.8% (273/288)  IGHV3-53*01  276  G.................------------------------------------------------------------------------  293
                                        Y  Y  C  A  R                                                                           
D  100.0% (8/8)     IGHD2-8*01   7    ---------------------------........-------------------------------------------------------  14
J  100.0% (40/40)   IGHJ6*02     23   ---------------------------------------------------.......................................  61

                                       
                                       
                    Query_4597   361  A  361
J  100.0% (40/40)   IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_321834

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           336     1e-94
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	N/A	N/A	TCGTGCAGAAAGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGTCGTGCAGAAAGGCTTTGACTTC	ATVVQKGFDF	249	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	104	10	0	91.2
CDR3-IMGT (germline)	249	255	7	6	1	0	85.7
Total	N/A	N/A	255	235	20	0	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4598   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAAAGCCTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.2% (235/255)  IGHV3-15*01  47   .......T......................................C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  G  I  D  G  G  T  A  D  Y  A  A  L  V  K  G  R  C  T  I  S  R  D  
                    Query_4598   91   AATGGGTTGGCCGTATTAAAAGCGGAATTGATGGTGGGACCGCAGACTACGCTGCACTCGTGAAAGGCAGATGCACCATCTCAAGAGATG  180
V  92.2% (235/255)  IGHV3-15*01  137  .G.....................AA..C............AA...............C..............T.................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--
                                      D  L  K  N  T  L  Y  L  Q  L  N  S  V  R  S  E  D  T  G  V  Y  Y  C  A  T  V  V  Q  K  G  
                    Query_4598   181  ATTTAAAAAACACACTGTATCTGCAACTGAACAGCGTGAGAAGCGAGGACACAGGCGTCTATTACTGTGCCACAGTCGTGCAGAAAGGCT  270
V  92.2% (235/255)  IGHV3-15*01  227  ...C.........G............A........C...A..C...........C...G.........A......---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
J  97.6% (40/41)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                               
                                      F  D  F  W  G  Q  G  T  L  V  T  V  S  
                    Query_4598   271  TTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  309
J  97.6% (40/41)    IGHJ4*02     7    ......A................................  45


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_131999

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            333     1e-93
IGHD3-3*02                                                                                            12.2    31   
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTT	GCATTT	CGATCTCCCACGAGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGCATTTCGATCTCCCACGAGGCATGGACGTC	ARLHFDLPRGMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  T  Y  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_4599  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGGGGCTCCATCACCAGTACTTACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  93.5% (229/245)  IGHV4-4*01  49   ..................G....C.....T..........G.....G.A.........G...........................G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  S  G  S  P  H  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_4599  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCCCCCACTACAGTCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  93.5% (229/245)  IGHV4-4*01  139  .................................A..A......AC.............................................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                      N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  W  C  A  R  L  H  F  D  L  P  R  G 
                    Query_4599  181  AACCAGTTCTCCCTGAAGTTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTGGTGTGCGAGGTTGCATTTCGATCTCCCACGAGGC  270
V  93.5% (229/245)  IGHV4-4*01  229  ..................C....C.............................T..C........-------------------------  293
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  100.0% (6/6)     IGHD3-3*02  7    --------------------------------------------------------------------......----------------  12

                                     -------->                                 
                                      M  D  V  W  G  Q  G  S  T  A  I  V  S  S 
                    Query_4599  271  ATGGACGTCTGGGGCCAAGGGTCCACGGCCATCGTCTCCTCA  312
J  92.9% (39/42)    IGHJ6*02    21   .....................A......T..C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_321832

Length=318
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           321     6e-90
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	N/A	N/A	GGCAGGTCCTTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGCAGGTCCTTTT	ARAGPF	243	260	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  S  F  S  S  T  L  M  H  W  F  R  Q  A  P  G  K  G  L  
                    Query_4600   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCAGGATTCAGCTTCAGTAGTACTTTGATGCACTGGTTCCGCCAAGCTCCAGGGAAGGGACTGG  90
V  91.5% (226/247)  IGHV3-74*01  47   ........................C...T.......C.........CTAC.G..........G......................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  A  R  I  E  S  D  G  S  T  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4600   91   TGTGGGTCGCACGCATAGAAAGTGATGGCAGTACCACAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.5% (226/247)  IGHV3-74*01  137  ........T....T..TA.T........G....G.....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----CDR3-IMGT--->          
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  A  G  P  F  W  G  Q  
                    Query_4600   181  AGAACACGCTGTATCTGCAGATGAACAGTCTGAGAGGCGAGGACACGGCTGTATATTACTGTGCAAGGGCAGGTCCTTTTTGGGGCCAGG  270
V  91.5% (226/247)  IGHV3-74*01  227  ...................A................C...............G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  100.0% (32/32)   IGHJ4*02     15   --------------------------------------------------------------------------------..........  24

                                                            
                                      G  T  L  V  T  V  S  S
                    Query_4600   271  GAACCCTGGTCACCGTCTCCTC  292
J  100.0% (32/32)   IGHJ4*02     25   ......................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30726981


Query= Query_321833

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           413     2e-117
IGHD5-18*01                                                                                           14.1    9.5   
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGAG	TACATCTATG	CCTCGGGCGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGAGTACATCTATGCCTCGGGCGGACTGGGTCGACCAC	ARDRSTSMPRADWVDH	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  I  S  Y 
                    Query_4601   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTTATCAGTTAT  91
V  95.5% (277/290)  IGHV1-18*01  7    ............................A....................................T................C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  T  Y  N  A  N  T  N  S  A  Q 
                    Query_4601   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCTACAATGCCAACACAAACTCTGCACAG  181
V  95.5% (277/290)  IGHV1-18*01  97   ..........................................................G.G.T.......GT..........A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  I  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_4601   182  AACCTCCAGGGCAGAATCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAACTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.5% (277/290)  IGHV1-18*01  187  ..G............G...........................................G..............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  D  R  S  T  S  M  P  R  A  D  W  V  D  H  W  G  Q  G  T  L  V  T  V  S 
                    Query_4601   272  GTGTATTACTGTGCGAGAGATCGGAGTACATCTATGCCTCGGGCGGACTGGGTCGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  361
V  95.5% (277/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD5-18*01  6    --------------------------....G.....------------------------------------------------------  15
J  95.8% (46/48)    IGHJ5*02     4    ----------------------------------------------.....T......C...............................  47

                                          
                                       S  
                    Query_4601   362  TCAG  365
J  95.8% (46/48)    IGHJ5*02     48   ....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_321830

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           321     6e-90
IGHD3-16*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	GGTGGAAATTA	TTTGGGG	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGTGGAAATTATTTGGGGGGTATGGACGTC	AGGNYLGGMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  Y  Y  T  M  Y  W  V  R  Q  V  P  G  R  G  L  
                    Query_4602   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATTATTATACCATGTACTGGGTCCGTCAAGTTCCGGGGAGGGGTCTGG  90
V  91.8% (225/245)  IGHV3-43*01  47   ............................................G...........C...............C........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  I  S  W  D  G  E  T  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  G  
                    Query_4602   91   AGTGGGTCTCTCTTATTAGTTGGGATGGTGAGACTACAGACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACACCGGCA  180
V  91.8% (225/245)  IGHV3-43*01  137  ..............................GT.GC...T.............................................A.A...  226
                                      E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  R  S  L  F  L  Q  M  N  S  L  I  S  E  D  T  A  L  Y  Y  C  A  G  G  N  Y  L  G  G  M  
                    Query_4602   181  AAAGGTCCCTCTTTCTGCAGATGAACAGTCTGATAAGTGAAGACACCGCCTTATATTACTGTGCAGGTGGAAATTATTTGGGGGGTATGG  270
V  91.8% (225/245)  IGHV3-43*01  227  ...AC.....G.A......A.............G..C...G...........G............-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  15   ----------------------------------------------------------------------------.......-------  21
J  97.8% (44/45)    IGHJ6*02     18   -----------------------------------------------------------------------------------.......  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4602   271  ACGTCTGGGGCCAAGGGACAACGGTCACCGTCTCCTCA  308
J  97.8% (44/45)    IGHJ6*02     25   ...................C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_321831

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            414     5e-118
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	25	5	0	83.3
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	26	1	0	96.3
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	272	7	0	97.5


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_4603  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCCGCTTGGAACTGGA  90
V  97.5% (272/279)  IGHV6-1*01  26   ...........................................................G......G....AG...T.............  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  R  Y  N  D  Y  A  V  S  V  K  
                    Query_4603  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGCGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  97.5% (272/279)  IGHV6-1*01  116  ...........................................................T..............................  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_4603  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  97.5% (272/279)  IGHV6-1*01  206  ..............A...........................................................................  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------CDR3-IMGT--------->                                  
                                     C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4603  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  97.5% (272/279)  IGHV6-1*01  296  .........---------------------------------------------------------  304
                                     C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02    4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_281550

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         316     2e-88
IGHD3-3*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTAATCTT	TTACGATTTTTCGACTGGCTAT	CGTCGAAA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCTTAATCTTTTACGATTTTTCGACTGGCTATCGTCGAAAGGTATGGACGTC	VRDLNLLRFFDWLSSKGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4604     1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACGTTTAGTAACTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-30-3*01  47   .....................C...............C..C....G......T.....................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  S  V  I  S  Y  D  G  T  T  K  Y  Y  A  S  S  V  K  G  R  F  T  N  S  R  D  N  S  
                    Query_4604     91   AGTGGGTGTCAGTAATTTCATATGATGGAACCACTAAGTACTACGCAAGCTCCGTGAAGGGCCGATTCACCAACTCCAGAGACAATTCCA  180
V  90.4% (226/250)  IGHV3-30-3*01  137  ........G....T..A.............G..A...A.........GA.......................T.................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------------CD
                                        K  N  T  L  Y  L  Q  V  S  S  L  T  P  E  D  T  A  V  Y  F  C  V  R  D  L  N  L  L  R  F  
                    Query_4604     181  AGAATACCCTGTATCTGCAAGTGAGCAGCCTGACACCCGAGGACACGGCTGTGTACTTCTGTGTGAGAGATCTTAATCTTTTACGATTTT  270
V  90.4% (226/250)  IGHV3-30-3*01  227  ....C..G............A...A........G.G.T.................T.A.....C......--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.4% (19/22)    IGHD3-3*01     4    --------------------------------------------------------------------------------..........  13

                                        R3-IMGT------------------------>                                 
                                        F  D  W  L  S  S  K  G  M  D  V  W  G  Q  G  T  A  V  I  V  S  S 
                    Query_4604     271  TCGACTGGCTATCGTCGAAAGGTATGGACGTCTGGGGCCAAGGGACCGCAGTCATCGTCTCCTCA  335
D  86.4% (19/22)    IGHD3-3*01     14   .G..G...T...-----------------------------------------------------  25
J  93.3% (42/45)    IGHJ6*02       18   --------------------...........................A.G....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_281551

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           318     6e-89
IGHJ6*02                                                                                              108     8e-28


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	N/A	N/A	TAAACTTCCGCCCGGATCCTCCCTCCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAACTTCCGCCCGGATCCTCCCTCCCACTACTACTACGGTATGGACGTC	VNFRPDPPSHYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  G  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4605   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCCATGGCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.8% (223/243)  IGHV3-23*01  47   ...........................................C...T...C.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  A  T  G  G  R  K  F  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_4605   91   AGTGGGTCTCGAGTATAAGCGCCACTGGTGGCAGAAAGTTCTACGCAGACTCCGTGAAGGGCCGGCTCACCATCTCCAGAGACAATTCCA  180
V  91.8% (223/243)  IGHV3-23*01  137  ..........AGC...T..T.GT.G......T..C.CA.A.........................T........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  H  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  N  F  R  P  D  P  P  S  
                    Query_4605   181  AGAACACGCTGCATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGTAAACTTCCGCCCGGATCCTCCCTCCC  270
V  91.8% (223/243)  IGHV3-23*01  227  ...........T............................G......................---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             

                                      GT-------------------->                                 
                                      H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4605   271  ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (56/56)   IGHJ6*02     7    ........................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_281552

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGAGGTTGTTGGTGTCC	TTCGGGGAGTTATT	TCCCCTTACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGAGGTTGTTGGTGTCCTTCGGGGAGTTATTTCCCCTTACCCCTTTGACTAC	AKDEVVGVLRGVISPYPFDY	237	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	122	24	13	5	6	54.2
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	250	229	15	6	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4606   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTTAGCGACTACGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  91.6% (229/250)  IGHV3-23*01  47   ........................C...................AG...T...................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  G  I  S        N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4606   91   AGTGGGTCTCAGCTATTGGAATTAGT------AACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  174
V  91.6% (229/250)  IGHV3-23*01  137  .................A.TGG....GGTGGT.G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  E  M  E  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  E  V  V  G  V  L  
                    Query_4606   175  AGAACACTCTGTATCTGGAAATGGAGAGCCTGAGAGCCGAGGACACGGCCCTATATTACTGTGCGAAAGATGAGGTTGTTGGTGTCCTTC  264
V  91.6% (229/250)  IGHV3-23*01  227  .......G.........C.....A.C........................G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (14/14)   IGHD3-10*01  13   ---------------------------------------------------------------------------------------...  15

                                      R3-IMGT------------------------>                                  
                                      R  G  V  I  S  P  Y  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4606   265  GGGGAGTTATTTCCCCTTACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (14/14)   IGHD3-10*01  16   ...........-------------------------------------------------------  26
J  100.0% (44/44)   IGHJ4*02     5    ----------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_281553

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           341     5e-96
IGHD2-21*01                                                                                           10.3    116  
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-21*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TA	GGTGA	AGCCCAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGTGAAGCCCAGTACTGGTACTTCGATCTC	ARVGEAQYWYFDL	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4607   1    ACCCTGTCCCTCACCTGCAGTGTTTCTGGTGACTCAATCAGTGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (231/244)  IGHV4-59*01  49   ...................C...C.......G...C......A...A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  T  S  E  N 
                    Query_4607   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTCGACACGTCCGAGAAC  180
V  94.7% (231/244)  IGHV4-59*01  139  .................................A.............................A..........A.........A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       K  F  S  L  K  L  N  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  V  G  E  A  Q  Y  W  Y  F 
                    Query_4607   181  AAGTTCTCCCTGAAGCTGAACTCTGCGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTAGGTGAAGCCCAGTACTGGTACTTC  270
V  94.7% (231/244)  IGHV4-59*01  229  C..................G.....T......................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*01  14   ------------------------------------------------------------------.....-------------------  18
J  100.0% (52/52)   IGHJ2*01     2    ------------------------------------------------------------------------------............  13

                                      ----->                                  
                                       D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4607   271  GATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  310
J  100.0% (52/52)   IGHJ2*01     14   ........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_281554

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           263     2e-72
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	94	20	0	82.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	206	38	0	84.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_4608   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  84.4% (206/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_4608   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  84.4% (206/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  A  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_4608   181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCGCATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACGTAT  270
V  84.4% (206/244)  IGHV4-59*01  229  .....C.....G..G....G.TC.......................TG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_4608   271  GTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    ---------------------------------...G....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_281555

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           327     9e-92
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TCCCGGGAGTCT	TATGATAGTAGTGGTTAT	GGAGCGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATCCCGGGAGTCTTATGATAGTAGTGGTTATGGAGCGGGCTAC	AKSRESYDSSGYGAGY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	24	12	10	0	2	83.3
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	49	2	0	96.1
CDR2-IMGT	100	123	24	24	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	231	222	7	2	96.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                        V  Q    S  G  F  T  F  N  S  Y  G  M  Q  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I 
                    Query_4609   15   TGTGCAG--TCTGGATTCACCTTCAATAGTTATGGCATGCAGTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCACTTATA  102
V  96.1% (222/231)  IGHV3-30*18  64   .......CC................G...C...........C..........................................G.....  153
                                        V  Q  P  L  D  S  P  S  V  A  M  A  C  T  G  S  A  R  L  Q  A  R  G  W  S  G  W  Q  L  Y

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  V  S  L 
                    Query_4609   103  TCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGGTGTCTCTG  192
V  96.1% (222/231)  IGHV3-30*18  154  .................................................................................C...A....  243
                                        H  M  M  E  V  I  N  T  M  Q  T  P  *  R  A  D  S  P  S  P  E  T  I  P  R  T  R  C  I  C

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  S  R  E  S  Y  D  S  S  G  Y  G  A  G 
                    Query_4609   193  CAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTACTACTGTGCGAAATCCCGGGAGTCTTATGATAGTAGTGGTTATGGAGCGGGC  282
V  96.1% (222/231)  IGHV3-30*18  244  ......................................T............---------------------------------------  294
                                        K  *  T  A  *  E  L  R  T  R  L  C  I  T  V  R                                          
D  100.0% (18/18)   IGHD3-22*01  8    ---------------------------------------------------------------..................---------  25
J  100.0% (38/38)   IGHJ4*02     11   -----------------------------------------------------------------------------------------.  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4609   283  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (38/38)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_281556

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           410     1e-116
IGHD6-25*01                                                                                           12.2    35    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TT	AGCGGC	GAAGGTAACCTTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTAGCGGCGAAGGTAACCTTATTGACTAC	AKLSGEGNLIDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  R  K  G  S  G  Y  S  F  T  R  Y
                    Query_4610   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCCGTAAGGGCTCTGGATACAGCTTTACCAGGTA  90
V  95.2% (276/290)  IGHV5-51*01  6    ..........................................................T.......T....................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  Y  D  V  R  Y  R  P
                    Query_4610   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTATGATGTGAGATACAGACC  180
V  95.2% (276/290)  IGHV5-51*01  96   .......................................................................C....ACC........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4610   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGCACCGCCTTTTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (276/290)  IGHV5-51*01  186  ...................................A.................ACC..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  K  L  S  G  E  G  N  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4610   271  CATTTATTACTGTGCGAAACTTAGCGGCGAAGGTAACCTTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.2% (276/290)  IGHV5-51*01  276  ...G.............G..---------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD6-25*01  10   ----------------------......-------------------------------------------------------  15
J  100.0% (42/42)   IGHJ4*02     7    -----------------------------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_281557

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           335     4e-94
IGHD2-15*01                                                                                           33.4    1e-05
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATCGGACTCCC	GGATATTGTCGTGGTGGTAG	GTGGTCCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCGGACTCCCGGATATTGTCGTGGTGGTAGGTGGTCCGGCTACTACTGCGGTTTGGACGTC	ARNRTPGYCRGGRWSGYYCGLDV	246	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  I  G  S  G  G  Y  Y  W  S  R  I  R  Q  H  P  G  K  G  
                    Query_4611   4    CCCTGAGACTCTCCTGCACTGTCTCTGGAGCCTCCATCGGCAGTGGTGGCTACTACTGGAGCCGGATCCGTCAGCACCCAGGGAAGGGCC  93
V  93.1% (231/248)  IGHV4-31*01  50   .....TCC...A................T.G.......A..........T............T.......C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  F  L  R  S  P  L  T  I  S  V  D  T  S  
                    Query_4611   94   TGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTTCCTCAGGAGTCCACTTACCATATCAGTAGACACGTCTG  183
V  93.1% (231/248)  IGHV4-31*01  140  ...................................................C.....A.....T.G.......................A  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      E  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  N  R  T  P  G  Y  C  
                    Query_4611   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCATATATTACTGTGCGAGAAATCGGACTCCCGGATATTGTC  273
V  93.1% (231/248)  IGHV4-31*01  230  ..................................................G.G...............----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  95.0% (19/20)    IGHD2-15*01  2    --------------------------------------------------------------------------------.........A  11

                                      --CDR3-IMGT----------------------------->                                 
                                      R  G  G  R  W  S  G  Y  Y  C  G  L  D  V  W  G  Q  G  A  A  V  S  F  S  S 
                    Query_4611   274  GTGGTGGTAGGTGGTCCGGCTACTACTGCGGTTTGGACGTCTGGGGCCAAGGGGCCGCGGTCTCCTTCTCCTCA  347
D  95.0% (19/20)    IGHD2-15*01  12   ..........----------------------------------------------------------------  21
J  89.1% (49/55)    IGHJ6*02     8    -------------------........A....A....................A..A.....A..G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_255371

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD1-26*01                                                                                           18.0    0.58 
IGHJ3*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCGA	TATACTGGGGGCTAC	CGTC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCGATATACTGGGGGCTACCGTCATGCTTTTGATATC	ARFRYTGGYRHAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	233	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4612   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTATTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  95.9% (233/243)  IGHV4-59*01  49   ...........................................G...C.A.......................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       Y  I  G  Y  I  S  Y  S  G  S  T  D  Y  N  P  S  L  K  S  G  V  T  I  S  L  D  T  S  K  N 
                    Query_4612   91   TATATTGGGTATATCTCTTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTGGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  95.9% (233/243)  IGHV4-59*01  139  .GG.............A................A.......................C..............G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  R  Y  T  G  G  Y  R  H 
                    Query_4612   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATTCCGATATACTGGGGGCTACCGTCAT  270
V  95.9% (233/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  86.7% (13/15)    IGHD1-26*01  3    ---------------------------------------------------------------------....G....A.....------  17
J  100.0% (45/45)   IGHJ3*02     3    ----------------------------------------------------------------------------------------..  4

                                      ----------->                               
                                       A  F  D  I  W  G  Q  G  T  M  V  T  V  S  
                    Query_4612   271  GCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTT  313
J  100.0% (45/45)   IGHJ3*02     5    ...........................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_34721

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           296     2e-82
IGHD3-10*01                                                                                           12.2    31   
IGHJ2*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGA	CGGGGA	TTGGAAG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGACGGGGATTGGAAGTTCGATCTC	ARHDGDWKFDL	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	220	31	0	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  I  S  S  R  F  F  W  G  W  L  R  Q  P  P  K  K  G 
                    Query_4613   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCATCAGTAGTCGTTTCTTCTGGGGCTGGCTCCGCCAGCCCCCAAAGAAGGGG  90
V  87.6% (220/251)  IGHV4-39*01  49   ...............................G........G.......A...A..A..........A..............GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  H  D  S  G  N  R  W  S  N  P  T  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_4613   91   CTGGAGTGGATTGGGACTATCCATGACAGTGGGAACAGATGGTCCAACCCGACCCTCAAGAGTCGACTCACCATATCGGTGGACACGTCC  180
V  87.6% (220/251)  IGHV4-39*01  139  ................G....T..T.T.......G..CC.AC.A.......T..............G..........C..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       M  N  Q  F  S  L  T  I  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  H  D  G  D  W  K  F 
                    Query_4613   181  ATGAACCAGTTCTCCCTGACGATTTCCTCTATGACCGCCGCTGACACGGCTGTCTATTACTGTGCGAGACATGACGGGGATTGGAAGTTC  270
V  87.6% (220/251)  IGHV4-39*01  229  .A.................A.C.GAG....G..........A...........G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01  15   --------------------------------------------------------------------------......----------  20
J  95.3% (41/43)    IGHJ2*01     11   ---------------------------------------------------------------------------------------...  13

                                      ----->                                  
                                       D  L  W  G  R  G  S  Q  V  T  V  S  S  
                    Query_4613   271  GATCTCTGGGGCCGTGGCTCCCAGGTCACTGTCTCCTCAG  310
J  95.3% (41/43)    IGHJ2*01     14   ..................A...T.................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_326355

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           318     6e-89
IGHD4-4*01                                                                                            14.1    8.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACAGAGGA	GACTACA	AGCGGCGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACAGAGGAGACTACAAGCGGCGGCTTTGACTAC	ARTEETTSGGFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  G  A  S  G  F  T  F  K  T  Y  D  M  N  W  V  R  Q  P  P  G  K  G  L  
                    Query_4614   1    GGTCCCTGAGACTCTCCTGTGGAGCCTCAGGATTTACCTTCAAAACTTATGATATGAACTGGGTCCGACAGCCTCCAGGGAAGGGGCTGG  90
V  91.1% (225/247)  IGHV3-48*03  47   .....................C......T.....C.......GT.G......A..............C...G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  G  G  S  T  I  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4614   91   AGTGGATTTCATACATTAGTAGTGGTGGTAGTACCATTTACTACTCAGACTCTGTGAAGGGACGATTCACCATCTCTAGAGACAACGCCA  180
V  91.1% (225/247)  IGHV3-48*03  137  .....G.................A.............A......G................C..............C.............  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      R  N  L  L  Y  L  Q  M  N  S  L  R  P  D  D  T  A  V  Y  Y  C  A  R  T  E  E  T  T  S  G  
                    Query_4614   181  GGAATTTACTGTATCTCCAAATGAACAGCCTGAGACCCGACGACACGGCTGTCTATTACTGTGCGAGGACAGAGGAGACTACAAGCGGCG  270
V  91.1% (225/247)  IGHV3-48*03  227  A...C.C.........G..................G....G...........T..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD4-4*01   2    ----------------------------------------------------------------------------.......-------  8

                                      ---------->                                  
                                      G  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_4614   271  GCTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  315
J  97.7% (43/44)    IGHJ4*02     5    -......................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_93381

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*05                                                                                           227     9e-62
IGHD3-10*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*05	IGHD3-10*01	IGHJ4*02	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	TCTACATGGACCTGAGCAGCCTGACATCTGAGGACACGGCCACA	TATTACT	GTGCGAGAGGGCTTTACAACTGGGTT	TTTGA	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	70	4	0	94.6
CDR1-IMGT	77	100	24	17	7	0	70.8
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	18	6	0	75
FR3-IMGT	176	187	12	11	1	0	91.7
Total	N/A	N/A	185	165	20	0	89.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  D  T  F  T  
                    Query_4615   3    AGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCGGGGTCCTCGGTGAGGGTCTCCTGCAAGGCTTCTGGAGACACCTTCACTA  92
V  89.2% (165/185)  IGHV1-69*05  2    .............G........G.................T.............A.......................G........GC.  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  S  I  S  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  G  I  I  P  R  F  G  T  K  N  Y  
                    Query_4615   93   GTTACAGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGAGGCATCATCCCCAGGTTTGGTACAAAGAATTACG  182
V  89.2% (165/185)  IGHV1-69*05  92   .C..TGC...................................T...............G........T.TC.........GCA..C....  181
                                      S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  S  T  W  T  *  A  A  *  H  L  R  T  R  P  H  I  T  V  R  E  G  F  T  T  G  F  L  T  
                    Query_4615   183  CACAGTCTACATGGACCTGAGCAGCCTGACATCTGAGGACACGGCCACATATTACTGTGCGAGAGGGCTTTACAACTGGGTTTTTGACTT  272
V  89.2% (165/185)  IGHV1-69*05  182  .....-------------------------------------------------------------------------------------  186
                                      A  Q                                                                                      
D  100.0% (7/7)     IGHD3-10*01  2    -------------------------------------------------.......----------------------------------  8
J  95.2% (40/42)    IGHJ4*02     6    ----------------------------------------------------------------------------------.......A  13

                                      ---------------->                 
                                      S  G  A  R  D  P  W  S  P  S  P   
                    Query_4615   273  CTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCA  306
J  95.2% (40/42)    IGHJ4*02     14   .............A....................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_93380

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           397     8e-113
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TTTCCAAGGCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTCCAAGGCGACTACTCGGACTTC	ARDFQGDYSDF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  T  C  K  A  S  G  Y  P  F  S  T  Y 
                    Query_4616   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCACCTGCAAGGCTTCTGGTTACCCCTTTAGCACCTAC  91
V  93.8% (272/290)  IGHV1-18*04  7    ......................................................T....................A......C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  H  G  L  E  W  L  G  W  I  S  G  H  N  G  S  T  K  N  A  Q 
                    Query_4616   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACACGGGCTTGAGTGGCTGGGATGGATCAGCGGTCACAATGGCAGCACAAAAAATGCACAG  181
V  93.8% (272/290)  IGHV1-18*04  97   ................................A............A...............C.T.......T.A......CT........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  D  R  V  T  M  T  T  D  T  S  T  T  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_4616   182  AAGTTCCAGGACAGAGTCACCATGACCACAGACACATCCACGACCACAGCGTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  93.8% (272/290)  IGHV1-18*04  187  ...C......G................................G......C.......................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  D  F  Q  G  D  Y  S  D  F  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_4616   272  GTATATTATTGTGCGAGAGATTTCCAAGGCGACTACTCGGACTTCTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  350
V  93.8% (272/290)  IGHV1-18*04  277  ..G.....C...........-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
J  91.7% (44/48)    IGHJ4*02     1    -------------------------------......TT....A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_255372

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            366     2e-103
IGHD3-3*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGTAGTCAAG	ACGATTTTTGGAGTGGTT	TGTTCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTAGTCAAGACGATTTTTGGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTC	ARDGSQDDFWSGLFHYYYGMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  P  P  G  K  G  L  
                    Query_4617  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGGTATTGGATGAGTTGGGTCCGCCAACCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-7*03  47   ..............................................C...........C...........GG..................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_4617  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (242/250)  IGHV3-7*03  137  ........................................................A.................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><---------------------------
                                     K  N  S  V  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  Q  D  D  F  
                    Query_4617  181  AGAACTCAGTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAGAGATGGTAGTCAAGACGATTTTT  270
V  96.8% (242/250)  IGHV3-7*03  227  ........C........C..................................G.................--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-3*01  6    ---------------------------------------------------------------------------------.........  14

                                     -CDR3-IMGT--------------------------->                                 
                                     W  S  G  L  F  H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4617  271  GGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  100.0% (18/18)   IGHD3-3*01  15   .........--------------------------------------------------------------  23
J  96.4% (54/56)    IGHJ6*02    7    ---------------.......C..C.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_93385

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           349     3e-98
IGHD2-15*01                                                                                           33.4    2e-05
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATGAAA	GATATTGTAGTGAAGGTAGTTGCTAC	CCTACA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTACCCTACATACTTTGACTTC	ARYERYCSEGSCYPTYFDF	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	69	5	0	93.2
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	19	5	0	79.2
FR3-IMGT	176	289	114	98	16	0	86
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	258	35	0	88.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  K  I  S  C  K  T  S  G  Y  S  F  S  
                    Query_4618   3    AGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAAAAGCCCGGGCAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGTTTCAGCA  92
V  88.1% (258/293)  IGHV5-51*01  2    ..G......................A..................G.......................GG............C..T.C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  S  G  E  G  L  E  W  M  G  I  I  Y  A  G  D  S  D  I  T  Y  
                    Query_4618   93   ACTATTGGATCGGCTGGGTGCGCCAGATGTCCGGTGAAGGCCTGGAGTGGATGGGAATCATCTATGCTGGCGACTCTGACATTACATATA  182
V  88.1% (258/293)  IGHV5-51*01  92   G...C........................C....GA...................G.........C....T........T.CC.G...C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  R  V  T  I  S  V  D  K  A  I  D  T  A  Y  V  Q  W  S  S  L  K  A  S  D  
                    Query_4618   183  GTCCGTCCTTTGAGGGCCGGGTCACCATCTCAGTCGACAAGGCCATCGACACCGCCTACGTACAGTGGAGCAGTCTGAAGGCCTCGGACA  272
V  88.1% (258/293)  IGHV5-51*01  182  .C........CC.A....A..............C.......T.....AG..........C.G...........C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  T  Y  Y  C  A  R  Y  E  R  Y  C  S  E  G  S  C  Y  P  T  Y  F  D  F  W  G  Q  G  T  
                    Query_4618   273  CCGCCACATATTACTGTGCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTACCCTACATACTTTGACTTCTGGGGCCAGGGAACCC  362
V  88.1% (258/293)  IGHV5-51*01  272  ......TG...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  88.5% (23/26)    IGHD2-15*01  3    ------------------------------............GT.....C......----------------------------------  28
J  95.7% (44/46)    IGHJ4*02     3    --------------------------------------------------------------..........A.................  30

                                                        
                                      P  V  T  V  S  S  
                    Query_4618   363  CGGTCACCGTCTCCTCAG  380
J  95.7% (44/46)    IGHJ4*02     31   T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_93384

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           332     3e-93
IGHD3-10*01                                                                                           21.8    0.041
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGGTTCGAGCAGTTATT	CCTTCGCGCG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTTCGAGCAGTTATTCCTTCGCGCGCTACGGTATGGACGTC	ARDGSSSYSFARYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4619   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACTTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-48*03  47   ....................G................C....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  G  G  G  R  T  I  Y  Y  A  D  S  V  K  G  R  F  P  L  S  R  D  N  T  
                    Query_4619   91   AGTGGGTTTCATACATTAGTGGCGGTGGAAGAACCATTTACTACGCAGACTCTGTGAAGGGCCGATTCCCCTTGTCCAGAGACAACACCA  180
V  92.4% (231/250)  IGHV3-48*03  137  ....................A.TA....T..T.....A..............................A..A.C............G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  T  A  L  H  L  Q  M  N  S  L  R  A  E  D  P  A  V  Y  Y  C  A  R  D  G  S  S  S  Y  S  
                    Query_4619   181  AGACCGCTCTGCATCTACAAATGAACAGCCTGAGAGCCGAAGACCCGGCTGTTTATTACTGTGCGAGAGATGGTTCGAGCAGTTATTCCT  270
V  92.4% (231/250)  IGHV3-48*03  227  ...A.T.A...T....G.......................G...A.........................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.2% (15/17)    IGHD3-10*01  10   ----------------------------------------------------------------------.......G.G.......---  26

                                      GT-------------------->                                 
                                      F  A  R  Y  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_4619   271  TCGCGCGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  326
J  98.0% (48/49)    IGHJ6*02     14   -------......................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_93386

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           386     1e-109
IGHD1-26*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGTCTA	TGGGAGCT	GGGAAGTTCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGTCTATGGGAGCTGGGAAGTTCTTTTGACTAC	ARGLWELGSSFDY	287	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	97	27	23	1	3	85.2
FR2-IMGT	98	148	51	49	2	0	96.1
CDR2-IMGT	149	172	24	20	4	0	83.3
FR3-IMGT	173	286	114	105	9	0	92.1
CDR3-IMGT (germline)	287	291	5	5	0	0	100
Total	N/A	N/A	291	271	17	3	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><--------CDR1-IMGT--
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  S
                    Query_4620   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCAG  90
V  93.1% (271/291)  IGHV1-69*06  6    ..................G.....................................................................--  93
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S   

                                      ------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-------
                                        F  A  V  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  V  P  F  F  D  T  T  N  F  A
                    Query_4620   91   TTTTGCTGTCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCGTCCCTTTCTTTGATACAACAAACTTCGC  180
V  93.1% (271/291)  IGHV1-69*06  94   -.A....A...G.................................................A.....A......G....G......A...  182
                                        Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A

                                      ---------------------------------------------FR3-IMGT-------------------------------------
                                        Q  K  F  Q  G  R  V  T  F  T  A  D  K  S  T  T  T  A  Y  I  E  L  S  G  L  R  S  E  D  T
                    Query_4620   181  ACAGAAGTTCCAGGGCAGAGTCACTTTTACCGCGGACAAATCGACGACCACAGCCTACATCGAGCTTAGCGGCCTCAGATCTGAGGACAC  270
V  93.1% (271/291)  IGHV1-69*06  183  ........................GA................C....G............G.....G...A....G..............  272
                                        Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T

                                      ---------------><--------------CDR3-IMGT-------------->                                  
                                        A  V  Y  Y  C  A  R  G  L  W  E  L  G  S  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4620   271  GGCCGTGTATTACTGTGCGAGGGGTCTATGGGAGCTGGGAAGTTCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.1% (271/291)  IGHV1-69*06  273  .....................--------------------------------------------------------------------  293
                                        A  V  Y  Y  C  A                                                                       
D  100.0% (8/8)     IGHD1-26*01  8    ----------------------------........-----------------------------------------------------  15
J  100.0% (43/43)   IGHJ4*02     6    ----------------------------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_93388

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           399     3e-113
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCT	CAGTGGCTGGTA	TCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCTCAGTGGCTGGTATCCCTAC	ARPLSGWYPY	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_4621   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGGGGAACCTTCAGCAGTTA  90
V  94.1% (272/289)  IGHV1-69*01  6    ..................G.....................................................A..C...........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  I  P  M  F  G  T  A  N  Y  A  Q
                    Query_4621   91   TGCTATCACGTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGCATCATCCCTATGTTTGGAACAGCCAACTACGCACA  180
V  94.1% (272/289)  IGHV1-69*01  96   ........GC..........................................G.G...........C.....T.....A...........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  R  D  R  V  T  V  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  K  F  E  D  T  A
                    Query_4621   181  GAAGTTCCGGGACAGAGTCACGGTTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAAATTTGAGGACACGGC  270
V  94.1% (272/289)  IGHV1-69*01  186  ........A..G..........A...................................................G..C............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        V  Y  Y  C  A  R  P  L  S  G  W  Y  P  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4621   271  CGTCTATTACTGTGCGAGACCTCTCAGTGGCTGGTATCCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  347
V  94.1% (272/289)  IGHV1-69*01  276  ...G...............----------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                           
D  100.0% (12/12)   IGHD6-19*01  9    ------------------------............-----------------------------------------  20
J  100.0% (38/38)   IGHJ4*02     11   ---------------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_161798

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           297     7e-83
IGHD3-10*01                                                                                           19.9    0.16 
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTCA	TATTGTTCGGGGA	ATGATTGTGACGCGGGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTCATATTGTTCGGGGAATGATTGTGACGCGGGGCTGGTTCGACCCC	ARDPHIVRGMIVTRGWFDP	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  L  S  N  Y  N  L  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_4622   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTAAGCAATTATAACTTAAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  88.0% (220/250)  IGHV3-21*01  47   ...................................A....C..T.GC....G.A.G.........................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  T  S  S  S  T  F  Y  A  T  S  V  K  G  R  F  T  I  S  R  D  N  G  
                    Query_4622   91   AGTGGGTCTCATCCATTAGCGGGACCAGTAGTTCCACATTCTACGCAACTTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  88.0% (220/250)  IGHV3-21*01  137  ...................TA.T.GT.......A..T..A.......GAC.....................................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  H  L  Q  M  S  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  P  H  I  V  R  G  
                    Query_4622   181  AGAACTCCCTACATCTGCAAATGAGTAGCCTGCGAGTCGAGGACACGGCTGTCTATTATTGTGCGAGAGATCCTCATATTGTTCGGGGAA  270
V  88.0% (220/250)  IGHV3-21*01  227  .......A..GT............AC......A...C...............G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD3-10*01  8    ----------------------------------------------------------------------------...G.........-  20

                                      -IMGT----------------------->                                  
                                      M  I  V  T  R  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4622   271  TGATTGTGACGCGGGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
J  100.0% (47/47)   IGHJ5*02     5    ----------------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_315659

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           296     2e-82
IGHD3-16*01                                                                                           12.2    31   
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TATTG	CACAGGGGCTTCAG	GTTATG	GA	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGGGCTTCAGGTTATGGATGGCTCGACCCC	TGASGYGWLDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	241	113	99	14	0	87.6
Total	N/A	N/A	241	215	26	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  M  S  D  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4623   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGACTCACAATGAGTGACTACGGCATGCATTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  89.2% (215/241)  IGHV3-33*03  47   ................................T....CT.C...AG...T........C..........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  K  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_4623   91   AATGGGTGGCAGTTATATGGTATGATGGAATTAAAAAATTCTATGCAGATTCCGTGAAGGGCCGATTCACCATTTCTAGAGACGACTCCA  180
V  89.2% (215/241)  IGHV3-33*03  137  .G............................G...T....A.........C.......................C..C......A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  D  S  L  R  A  D  D  T  A  L  Y  Y  C  T  G  A  S  G  Y  G  W  L  
                    Query_4623   181  AGAACACCCTATTTCTGCAAATGGACAGTCTGAGAGCCGACGACACGGCTCTATATTATTGCACAGGGGCTTCAGGTTATGGATGGCTCG  270
V  89.2% (215/241)  IGHV3-33*03  227  .......G..G.A..........A....C...........G.........G.G.....C..-----------------------------  287
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                
D  100.0% (6/6)     IGHD3-16*01  24   ---------------------------------------------------------------------------......---------  29
J  95.7% (44/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------...T...  12

                                      ---->                                  
                                      D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_4623   271  ACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  309
J  95.7% (44/46)    IGHJ5*02     13   .................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_315658

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            324     8e-91
IGHD1-26*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	GCTGGGC	GGGAGCT	GGACCCCAGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAAAGATGCTGGGCGGGAGCTGGACCCCAGTTACTTAAACTAC	AKDAGRELDPSYLNY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	251	9	8	1	0	88.9
Total	N/A	N/A	251	229	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_4624   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAGGGGCCTGG  90
V  91.2% (229/251)  IGHV3-9*01   47   ....................................CC...........................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  G  W  N  G  D  S  I  G  Y  A  G  A  V  Y  G  R  F  T  I  S  R  D  N  A  
                    Query_4624   91   AGTGGGTCTCAGGTATTGGTTGGAATGGGGATAGCATCGGCTACGCGGGCGCTGTGTATGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.2% (229/251)  IGHV3-9*01   137  .................A........A.T.G......A.....T....A.T.....A.G...............................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  K  S  V  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  A  G  R  E  L  D  
                    Query_4624   181  AGAAGTCCGTCTACCTGCAAATGAACAGTCTGAGACCTGAGGACACGGCCGTTTATTATTGTGCTAAAGATGCTGGGCGGGAGCTGGACC  270
V  91.2% (229/251)  IGHV3-9*01   227  ....C...C.G..T.....................G..............T.G.....C.....A......-------------------  297
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (7/7)     IGHD1-26*01  9    ------------------------------------------------------------------------------.......-----  15

                                      ---------------->                                  
                                      P  S  Y  L  N  Y  W  G  Q  G  T  V  V  I  V  S  S  
                    Query_4624   271  CCAGTTACTTAAACTACTGGGGCCAGGGAACCGTGGTCATCGTCTCCTCAG  321
J  91.3% (42/46)    IGHJ4*02     3    -----.....TG....................C......C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_34726

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           332     3e-93
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_4625   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.4% (228/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  N  R  V  T  I  S  V  D  T  S 
                    Query_4625   91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAATCGAGTCACCATTTCCGTAGACACGTCC  180
V  93.4% (228/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C....G............A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  T  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_4625   181  AAGACCCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  93.4% (228/244)  IGHV4-39*01  229  ....A...............G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_4625   271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  319
J  97.9% (47/48)    IGHJ4*02     1    -....................................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_315651

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTTTATTACCT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTATTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_4626   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTTCCACTTA  90
V  94.8% (276/291)  IGHV5-51*01  6    ..............................................................................C...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  P
                    Query_4626   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCGGATGCCAGATACAGTCC  180
V  94.8% (276/291)  IGHV5-51*01  96   C.......G.................................................T.............T...A..........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_4626   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  .......C.....................C...............C...........................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_4626   271  CATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTATTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  94.8% (276/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD1-26*01  4    -----------------------------...G....A.....-----------------------------------------------  17
J  98.0% (48/49)    IGHJ6*02     14   ------------------------------------------------------....................................  49

                                                   
                                        T  V  S  S 
                    Query_4626   361  CACCGTCTCGTCA  373
J  98.0% (48/49)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_315650

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           41.1    7e-08
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TT	TATTACTATGACAGTAGTGGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTATTACTATGACAGTAGTGGTTATTTTGACTAC	ARLYYYDSSGYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  N  S  Y  W  G  W  I  R  Q  P  P  G  M  G 
                    Query_4627   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGCAGTAATTCCTACTGGGGCTGGATCCGCCAGCCCCCAGGGATGGGG  90
V  93.6% (234/250)  IGHV4-39*01  49   ............................................T....G..A................................A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  S  S  S  G  Y  T  Y  Y  N  P  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_4627   91   CTGGAGTGGATTGGGAGTATCTCTTCTAGTGGGTACACCTATTACAACCCGTCCCTCAAGAGTCGAATCACCATATCCGTGGACACGTCC  180
V  93.6% (234/250)  IGHV4-39*01  139  ......................A..A.......AG......C........................G.............A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  V  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  Y  Y  Y  D  S  S 
                    Query_4627   181  AAGAACCAGGTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGACTTTATTACTATGACAGTAGT  270
V  93.6% (234/250)  IGHV4-39*01  229  .........T.........A......C..............A...........G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.8% (23/24)    IGHD3-22*01  2    ------------------------------------------------------------------------...........T......  19

                                      -------------->                                  
                                       G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4627   271  GGTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
D  95.8% (23/24)    IGHD3-22*01  20   ......-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_315652

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           397     8e-113
IGHD3-22*01                                                                                           27.6    9e-04 
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TC	ACTATGAGAGTAGTGATTTTTAC	ACACA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCACTATGAGAGTAGTGATTTTTACACACATGATGGTTTTAATATC	ASHYESSDFYTHDGFNI	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	271	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  T  S  G  Y  S  F  T  S  Y
                    Query_4628   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGTGAGTCTCTGAGGATCTCCTGTAAGACCTCTGGATACAGCTTCACCAGCTA  90
V  94.1% (271/288)  IGHV5-51*03  6    ..............................A........G..........A.............GGT..............T........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  S  M  G  I  I  Y  P  S  D  S  D  T  T  Y  S  P
                    Query_4628   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTCCATGGGCATCATCTATCCCAGTGACTCCGATACCACATACAGCCC  180
V  94.1% (271/288)  IGHV5-51*03  96   ........G...................................GG.....G...........TG.......T.......G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  P  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  R  A  S  D  T  A
                    Query_4628   181  GTCCTTCCAAGGCCAGGTCACCATCCCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACACCGC  270
V  94.1% (271/288)  IGHV5-51*03  186  .........................T................................................A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  S  H  Y  E  S  S  D  F  Y  T  H  D  G  F  N  I  W  G  Q  G  T  M  V  T  V
                    Query_4628   271  CATGTATTACTGTGCGAGTCACTATGAGAGTAGTGATTTTTACACACATGATGGTTTTAATATCTGGGGCCAAGGGACAATGGTCACCGT  360
V  94.1% (271/288)  IGHV5-51*03  276  ..................------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  87.0% (20/23)    IGHD3-22*01  6    --------------------.......T.......G..A....-----------------------------------------------  28
J  96.0% (48/50)    IGHJ3*02     1    ------------------------------------------------.....C....G...............................  42

                                              
                                        S  S  
                    Query_4628   361  CTCTTCAG  368
J  96.0% (48/50)    IGHJ3*02     43   ........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_315657

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           329     3e-92
IGHD1-7*01                                                                                            12.2    31   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCCACA	GGAACT	CGCCACG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCCACAGGAACTCGCCACGACTTTGACTCC	ARDPTGTRHDFDS	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  K  A  S  G  F  A  F  S  V  H  E  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4629   1    GGTCCCTGAGACTCTCCTGTAAAGCCTCTGGATTCGCCTTCAGTGTTCATGAAATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  92.0% (230/250)  IGHV3-48*03  47   ....................GC.............A........AG.T.........AC..........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  N  S  G  S  N  I  I  Y  Y  T  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_4629   91   AATGGATTTCATACATTAATAGTGGTAGTAATATCATATACTACACAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.0% (230/250)  IGHV3-48*03  137  .G...G............G....A..G...G..C..........G............A................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  T  G  T  R  H  
                    Query_4629   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGAGAGACCCCACAGGAACTCGCCACG  270
V  92.0% (230/250)  IGHV3-48*03  227  ............A.....................................G...................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-7*01   10   -----------------------------------------------------------------------------......-------  15

                                      ---------->                                  
                                      D  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4629   271  ACTTTGACTCCTGGGGTCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  95.6% (43/45)    IGHJ4*02     4    .........A......C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_315656

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            349     2e-98
IGHD6-19*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	CT	GTATGGCAGTGGC	CTCCATGGGGGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATCTGTATGGCAGTGGCCTCCATGGGGGGATTGACTGC	AKDLYGSGLHGGIDC	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	251	9	9	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4630   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGACTATGCCATACACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  94.4% (237/251)  IGHV3-9*01   47   ..............................................T........G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  W  N  S  G  R  I  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_4630   91   AGTGGGTCTCAAGTATCAGTTGGAATAGTGGTAGGATATACTATGCGGACTCTGTGAAGGGCCGATTCTCCATCTCCAGAGACAACTCCA  180
V  94.4% (237/251)  IGHV3-9*01   137  ...........G....T.................C...GG............................A.................G...  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  V  Y  L  Q  M  N  S  L  G  A  E  D  T  A  L  Y  Y  C  A  K  D  L  Y  G  S  G  L  
                    Query_4630   181  AGAACTCCGTCTATCTGCAAATGAACAGTCTGGGAGCTGAGGACACGGCCCTCTATTACTGTGCAAAAGATCTGTATGGCAGTGGCCTCC  270
V  94.4% (237/251)  IGHV3-9*01   227  ........C.G.....................A.................T.G..................-------------------  297
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  92.3% (12/13)    IGHD6-19*01  3    -------------------------------------------------------------------------....A........----  15

                                      ---------------->                                  
                                      H  G  G  I  D  C  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_4630   271  ATGGGGGGATTGACTGCTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  321
J  95.2% (40/42)    IGHJ4*02     7    ---------......A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_286599

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD2-2*02                                                                                            21.8    0.041
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCTTATTTTGTGTTAC	TACCAGTTGCTATA	ATGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCTTATTTTGTGTTACTACCAGTTGCTATAATGCTTTTGACTCC	ARDPLFCVTTSCYNAFDS	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  T  H  H  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4631   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGTACTCACCACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   ..................A........................G.T..T.......C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  R  N 
                    Query_4631   91   TGGATTGGATATATCTACTACACTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAGGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G........T....G.....G............................................T...........A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  Q  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  D  P  L  F  C  V  T  T  S 
                    Query_4631   181  CAGTTTTCCCTGCAGCTGAGCTCTGTGACCGCTGCGGACTCGGCCGTGTATTACTGTGCGAGAGATCCCTTATTTTGTGTTACTACCAGT  270
V  94.3% (231/245)  IGHV4-59*01  229  .....C......A..........................A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD2-2*02   16   -----------------------------------------------------------------------------------......C  22

                                      -------------------->                                
                                       C  Y  N  A  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4631   271  TGCTATAATGCTTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  323
D  92.9% (13/14)    IGHD2-2*02   23   .......----------------------------------------------  29
J  97.6% (40/41)    IGHJ4*02     6    ------------.......A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_274326

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ2*01                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTACTATAATCCTAGTGGTTTTTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACTATAATCCTAGTGGTTTTTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGFYGYWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  N  N  Y  Y  W  S  W  S  R  Q  P  P  G  K  G  L  E 
                    Query_4632   1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAATAATTATTACTGGAGCTGGAGCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ...........................G............G..G...C.............T............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  D  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_4632   91   TGGATTGGGGACATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  .........T.T..............................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  F  Y 
                    Query_4632   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATTACTATAATCCTAGTGGTTTTTAC  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.0% (21/25)    IGHD3-22*01  4    -----------------------------------------------------------------.......G..AG........A....  28

                                      -------------------->                                  
                                       G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4632   271  GGGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  325
J  100.0% (52/52)   IGHJ2*01     2    ---....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_122086

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD3-16*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4633   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (227/249)  IGHV4-61*01  49   .......................C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S 
                    Query_4633   91   CTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  91.2% (227/249)  IGHV4-61*01  139  ....A.........GT............G......CAC..A.........................G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y 
                    Query_4633   181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTAT  270
V  91.2% (227/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------------.....  28

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_4633   271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
D  100.0% (7/7)     IGHD3-16*02  29   ..--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_28706

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            394     7e-112
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_4634  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.4% (271/290)  IGHV1-8*02  6    ..................G..........................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_4634  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.4% (271/290)  IGHV1-8*02  96   ........A.........................................................C.......................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_4634  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.4% (271/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4634  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.4% (271/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_172226

Length=316
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*02                                                                                           265     5e-73
IGHD2-21*02                                                                                           14.1    7.7  
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*02	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCAGGA	TGGTGAC	CTCGGATGG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATCAGGATGGTGACCTCGGATGG	GKDQDGDLGW	230	259	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	45	6	0	88.2
CDR2-IMGT	92	115	24	17	7	0	70.8
FR3-IMGT	116	229	114	103	11	0	90.4
CDR3-IMGT (germline)	230	237	8	7	1	0	87.5
Total	N/A	N/A	225	197	28	0	87.6


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  H  Y  G  V  H  W  I  R  Q  A  P  G  R  G  L  E  W  V  A  F  I  S  S  G
                    Query_4635   13   GTCTGGATTCACCTTCAGTCATTATGGCGTACACTGGATCCGCCAGGCTCCAGGCAGGGGACTGGAGTGGGTGGCATTCATATCGTCCGG  102
V  87.6% (197/225)  IGHV3-30*02  72   ...................AGC......A.G......G..................A...G.................T...CG..AT.A  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  F  I  R  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        S  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  T  S  R  D  D  S  R  N  T  F  Y  L  Q  M  D
                    Query_4635   103  TTCAAGTAATAAATATTACGCAGACTCCGTGAAGGGCCGATTCACCACCTCCAGAGACGATTCCAGGAACACGTTTTATCTGCAAATGGA  192
V  87.6% (197/225)  IGHV3-30*02  162  .GG............C..T............................T..........A......A.......C.G............A.  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------CDR3-IMGT--------->                       
                                        S  L  R  V  E  D  T  A  V  Y  F  C  G  K  D  Q  D  G  D  L  G  W  W  G  R  G  T  L  V  T
                    Query_4635   193  CAGCCTGAGAGTTGAGGACACGGCTGTGTATTTTTGTGGGAAAGATCAGGATGGTGACCTCGGATGGTGGGGCCGGGGAACCCTGGTCAC  282
V  87.6% (197/225)  IGHV3-30*02  252  ...........C....................AC....C......---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                
D  100.0% (7/7)     IGHD2-21*02  13   ---------------------------------------------------.......--------------------------------  19
J  94.1% (32/34)    IGHJ4*02     15   -------------------------------------------------------------------.......A...............  37

                                                 
                                        V  S  S  
                    Query_4635   283  CGTCTCTTCAG  293
J  94.1% (32/34)    IGHJ4*02     38   ......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30515799


Query= Query_199954

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           332     3e-93
IGHD5-18*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTAC	GTGGATACAG	ATC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTACGTGGATACAGATCCTACTTTGACTCC	ARLRGYRSYFDS	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	227	15	0	93.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_4636   4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTTCTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  93.8% (227/242)  IGHV4-34*01  50   .....TCC...A.................................A............................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  T  S  R  V  T  V  S  V  D  T  S  K  N  
                    Query_4636   94   GGATTGCAGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCACGAGTCGGGTCACCGTATCAGTAGACACGTCCAAGAACC  183
V  93.8% (227/242)  IGHV4-34*01  140  ......GG...........................................A......A......A........................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  R  M  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  R  G  Y  R  S  Y  F  D  
                    Query_4636   184  AGTTCTCCCTGAGGATGAGCTCTGTGACCGCCGCGGACACCGCTTTATATTACTGTGCGAGATTACGTGGATACAGATCCTACTTTGACT  273
V  93.8% (227/242)  IGHV4-34*01  230  ............A.C.........................G...G.G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD5-18*01  1    ------------------------------------------------------------------..........--------------  10
J  91.3% (42/46)    IGHJ4*02     2    -------------------------------------------------------------------------------...........  12

                                      ->                                 
                                      S  W  G  R  G  T  L  V  T  V  S  S 
                    Query_4636   274  CCTGGGGCCGGGGCACCCTGGTCACCGTCTCGTCA  308
J  91.3% (42/46)    IGHJ4*02     13   A........A...A.................C...  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_199955

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*09                                                                                           378     3e-107
IGHD7-27*01                                                                                           18.0    0.65  
IGHJ3*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*09	IGHD7-27*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GG	AACTGGGGA	TCCGCTTCCCGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAACTGGGGATCCGCTTCCCGGGCTTTTGTTATC	ARGNWGSASRAFVI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  T  S  G  G  T  F  S  N  Y
                    Query_4637   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACTTCTGGAGGCACCTTCAGCAACTA  90
V  91.7% (266/290)  IGHV1-69*09  6    ..................G.............................................G.....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  Y  W  V  R  Q  A  P  A  Q  G  L  E  W  M  G  G  I  F  P  M  L  D  I  T  N  Y  P  Q
                    Query_4637   91   TGCTATCTACTGGGTGCGACAGGCCCCTGCACAAGGGCTTGAGTGGATGGGAGGCATCTTCCCTATGCTTGATATAACAAATTATCCACA  180
V  91.7% (266/290)  IGHV1-69*09  96   .......AG....................G......................A.G...A.......C....G....G....C..CG....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  I  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  L  Q  G  R  V  T  I  T  A  D  K  S  T  T  T  A  Y  M  E  L  T  S  L  R  S  E  D  T  A
                    Query_4637   181  GAGTTTGCAGGGCAGAGTCACCATCACCGCGGACAAATCCACGACCACAGCCTACATGGAGCTGACCAGCCTGAGATCTGAGGACACGGC  270
V  91.7% (266/290)  IGHV1-69*09  186  ..AG..C..............G..T...................G....................G........................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  G  N  W  G  S  A  S  R  A  F  V  I  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_4637   271  CATCTATTACTGTGCGAGAGGGAACTGGGGATCCGCTTCCCGGGCTTTTGTTATCTGGGGCCAAGGGACATTGGTCTCCGTCTCTTCAG  359
V  91.7% (266/290)  IGHV1-69*09  276  .G.G................---------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                       
D  100.0% (9/9)     IGHD7-27*01  3    ----------------------.........----------------------------------------------------------  11
J  93.5% (43/46)    IGHJ3*02     5    -------------------------------------------.......A...................A.....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_199956

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           350     9e-99
IGHD3-16*02                                                                                           14.1    9.1  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	267	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	80	30	25	5	0	83.3
FR2-IMGT	81	131	51	47	4	0	92.2
CDR2-IMGT	132	152	21	17	4	0	81
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	272	6	6	0	0	100
Total	N/A	N/A	272	248	24	0	91.2


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  F  G  G  S  V  S  S  D  Y  H  Y  W  S  W  
                    Query_4638   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTGTTTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGA  90
V  91.2% (248/272)  IGHV4-61*01  26   ................T.............................C.C...............C....G.AG.T..........C....  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  P  P  G  K  G  L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  
                    Query_4638   91   TCCGGCAGCCCCCAGGGAAGGGACTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAA  180
V  91.2% (248/272)  IGHV4-61*01  116  ...........................A.........GT............G......CAC..A.........................G  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      M  S  M  S  V  D  T  S  K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  
                    Query_4638   181  TGTCCATGTCAGTAGACACGTCCAAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGA  270
V  91.2% (248/272)  IGHV4-61*01  206  .CA....A.................G................A.................................G.............  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      --------------CDR3-IMGT----------------->                                  
                                      R  T  R  H  I  D  G  Y  R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_4638   271  GAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  345
V  91.2% (248/272)  IGHV4-61*01  296  ..-------------------------------------------------------------------------  297
                                      R                                                                          
D  100.0% (7/7)     IGHD3-16*02  24   ------------------.......--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    -------------------------.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_199957

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           361     5e-102
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGAGCG	GCACTGGCTGGTA	TTTGGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGAGCGGCACTGGCTGGTATTTGGCCTAC	ARGSGTGWYLAY	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	68	7	0	90.7
CDR1-IMGT	78	101	24	17	7	0	70.8
FR2-IMGT	102	152	51	45	6	0	88.2
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	105	9	0	92.1
CDR3-IMGT (germline)	291	297	7	6	1	0	85.7
Total	N/A	N/A	295	263	32	0	89.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  A  K  K  P  G  A  S  V  K  V  S  C  E  A  S  G  Y  S  F  T 
                    Query_4639   3    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGCGAAGAAACCTGGGGCCTCAGTGAAGGTTTCTTGCGAGGCTTCTGGATACTCCTTCACC  92
V  89.2% (263/295)  IGHV1-18*04  1    ...G.T.........................T......G....................C..C...A..........T...A....T...  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  Y  I  Q  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  G  Y  N  G  N  T  K  Y 
                    Query_4639   93   ACTTACTATATACAGTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGCTGGGATGGATCAGCGGCTACAATGGTAACACAAAGTAT  182
V  89.2% (263/295)  IGHV1-18*04  91   .GC...GG...CAGC.......................A............A...............CT.................C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  L  Q  D  R  V  T  L  T  I  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_4639   183  GCACAGAACCTCCAGGACAGAGTCACCCTGACCATAGACACATCTACGAGCACTGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGAC  272
V  89.2% (263/295)  IGHV1-18*04  181  ........G.......G..........A......C.........C........A.....C..............................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  V  Y  Y  C  A  R  G  S  G  T  G  W  Y  L  A  Y  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_4639   273  ACGGCCGTCTATTACTGTGCGCGAGGGAGCGGCACTGGCTGGTATTTGGCCTACTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  360
V  89.2% (263/295)  IGHV1-18*04  271  ........G............A...---------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                 
D  92.3% (12/13)    IGHD6-19*01  8    -------------------------------...G.........--------------------------------------------  20
J  97.4% (37/38)    IGHJ4*02     11   --------------------------------------------------......................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_199950

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           291     6e-81
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-22*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGACA	TGGCGACTAT	TATGATAGTAGCGGTT	TTGCAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTCGACATGGCGACTATTATGATAGTAGCGGTTTTGCAGAC	TRHGDYYDSSGFAD	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	116	63	46	5	12	73
CDR2-IMGT	117	146	30	25	5	0	83.3
FR3-IMGT	147	260	114	104	10	0	91.2
CDR3-IMGT (germline)	261	268	8	7	1	0	87.5
Total	N/A	N/A	268	229	27	12	85.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------------FR2-IMGT--
                                         S  L  R  L  S  C  A  A  S  G  I  S  F  S  D  S  S  Q  Y  S  S  I  H  W  V  R  Q  A  P  
                    Query_4640   1    GGTCCCTGAGACTCTCCTGTGCAGCTTCTGGGATCTCCTTCAGTGACTCTTCTCAGTACTCTTCTATACACTGGGTCCGCCAGGCTCCCG  90
V  85.4% (229/268)  IGHV3-73*01  47   .........A...............C......T..A.........G....G..------------..G..................T...  124
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A              M  H  W  V  R  Q  A  S  

                                      -------------------------><----------CDR2-IMGT---------><---------------------------------
                                      G  R  G  L  E  W  L  G  R  M  R  S  K  P  N  A  Y  A  T  T  Y  A  A  S  V  K  G  R  F  T  
                    Query_4640   91   GGAGAGGCCTGGAGTGGCTTGGCCGTATGAGAAGCAAACCTAACGCATACGCGACAACATATGCTGCGTCGGTGAAAGGCAGGTTCACCA  180
V  85.4% (229/268)  IGHV3-73*01  125  ...A...G.........G..........T.........G.....AGT.........G.................................  214
                                      G  K  G  L  E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  R  D  D  P  K  N  M  A  Y  L  *  M  N  S  L  K  A  E  D  T  A  M  Y  Y  C  T  R  H  
                    Query_4640   181  TTTCCAGAGATGACCCAAAGAACATGGCGTATCTGTAAATGAACAGCCTGAAAGCCGAGGACACGGCCATGTACTATTGTACTCGACATG  270
V  85.4% (229/268)  IGHV3-73*01  215  .C...........TT.........C..........C.................A..............G....T..C......A....--  302
                                      I  S  R  D  D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R     

                                      -------CDR3-IMGT--------------->                                  
                                      G  D  Y  Y  D  S  S  G  F  A  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4640   271  GCGACTATTATGATAGTAGCGGTTTTGCAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  93.8% (15/16)    IGHD3-22*01  8    --------...........T....------------------------------------------  23
J  100.0% (36/36)   IGHJ4*02     13   ------------------------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_199951

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           12.2    30   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGACGGGT	TGGCTG	CCC	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGACGGGTTGGCTGCCCGACGAC	ARGTGWLPDD	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  Y  C  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4641   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTACTACTGCAACTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  93.9% (229/244)  IGHV4-59*01  49   ...............................G..........A..........G.G..................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  N  T  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_4641   91   TGGATTGGACATATCTACAACACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  93.9% (229/244)  IGHV4-59*01  139  ........GT.......TT...G.....G.............................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  T  G  W  L  P  D  D  W 
                    Query_4641   181  CAGTTCTCCTTGAACCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGACGGGTTGGCTGCCCGACGACTGG  270
V  93.9% (229/244)  IGHV4-59*01  229  .........C....G....G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  12   ------------------------------------------------------------------------......------------  17
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------...T.....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_4641   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.5% (39/40)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_199952

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           366     2e-103
IGHD2-8*02                                                                                            10.3    136   
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGGGCATTCGAGCCT	CTGGT	CC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGGGCATTCGAGCCTCTGGTCCCAACTGGTTCGACCCC	AKGGIRASGPNWFDP	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	262	28	0	90.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  T  S  G  G  I  L  N  N  Y
                    Query_4642   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACCTCTGGAGGCATTTTGAACAACTA  90
V  90.3% (262/290)  IGHV1-69*01  6    ..................G.............................................G.T..........CC..C.G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  N  W  L  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  M  P  I  F  G  P  A  N  Y  A  Q
                    Query_4642   91   TGGGATCAATTGGCTCCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCATCATGCCTATCTTTGGTCCAGCAAACTACGCACA  180
V  90.3% (262/290)  IGHV1-69*01  96   ..CT....GC...G.G......................................G.....C............A................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  N  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_4642   181  GAAGTTCCAGGGCAGAGTCACCATTACCGCGGACGAGTCCACAAACACAGCCTACATGGAATTGAGCAGCCTGAGATCTGAGGACACAGC  270
V  90.3% (262/290)  IGHV1-69*01  186  .....................G..............A.....G.G...............GC.........................G..  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  F  C  A  K  G  G  I  R  A  S  G  P  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4642   271  CATGTACTTCTGTGCGAAAGGGGGCATTCGAGCCTCTGGTCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  90.3% (262/290)  IGHV1-69*01  276  .G....T.A........G..----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD2-8*02   12   -----------------------------------.....--------------------------------------------------  16
J  100.0% (50/50)   IGHJ5*02     2    ------------------------------------------................................................  49

                                        
                                        
                    Query_4642   361  AG  362
J  100.0% (50/50)   IGHJ5*02     50   ..  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_199953

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           321     7e-90
IGHD6-19*01                                                                                           18.0    0.60 
IGHJ2*01                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAA	CAGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAACAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQQWLPGDWYFDL	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  R  N  Y  W  S  W  I  R  Q  P  P  G  E  R  L  E 
                    Query_4643   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCACTAGAAACTACTGGAGCTGGATCCGGCAGCCCCCAGGTGAGAGACTGGAG  90
V  92.2% (224/243)  IGHV4-59*08  49   ...................C...........G........G...TT...............................GA..G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_4643   91   TGGATTGCATATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  92.2% (224/243)  IGHV4-59*08  139  .......GG......T...........AG...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  R  A  R  F  L  P  A  V  Q  Q  W  L 
                    Query_4643   181  CAGTTCTCCCTGAAGATGACTTCTGTGACCGCCGCAGACACGGCCATGTATTACCGTGCGAGATTCCTCCCCGCGGTGCAACAGTGGCTG  270
V  92.2% (224/243)  IGHV4-59*08  229  ...............C...GC........................G........T........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-19*01  9    ---------------------------------------------------------------------------------.........  17

                                      ----------------------->                                  
                                       P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4643   271  CCAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  328
J  100.0% (51/51)   IGHJ2*01     3    -------...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_294080

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           350     9e-99
IGHD2-21*01                                                                                           18.0    0.64 
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CAGTTTCTGTCTTAGTTTGGACCGGGGAGT	TTGTGGTGG	N/A	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGGGGAGTTTGTGGTGGTTTTGATATG	ARGSFCLSLDRGVCGGFDM	261	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	50	1	0	98
CDR2-IMGT	126	146	21	18	3	0	85.7
FR3-IMGT	147	260	114	104	10	0	91.2
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	246	22	0	91.8


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  N  G  G  S  L  N  A  Y  Y  W  S  W  I  R  
                    Query_4644   1    CAGGACTGGTGAAGCCCTCGGAGACCCTTTCCCTCACCTGCGCCGTCAATGGTGGGTCCCTCAATGCTTACTACTGGAGCTGGATCCGCC  90
V  91.8% (246/268)  IGHV4-34*01  26   ........T.......T...........G..............T...T...........T...G..G.......................  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  Q  S  G  T  T  N  Y  K  P  S  L  K  S  R  V  I  
                    Query_4644   91   AGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGGAAATCAATCAAAGTGGCACCACCAACTACAAGCCGTCCCTCAAGAGTCGAGTAATCA  180
V  91.8% (246/268)  IGHV4-34*01  116  ................G..........................T.....A.G............C....................C.C..  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      T  S  V  D  T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_4644   181  CATCGGTGGACACGTCCAAGAATCAGTTCTCCTTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCA  270
V  91.8% (246/268)  IGHV4-34*01  206  T...A..A..............C.........C.....C...G.............................................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  

                                      --------------CDR3-IMGT----------------------->                               
                                      S  F  C  L  S  L  D  R  G  V  C  G  G  F  D  M  W  G  Q  G  T  M  V  T  V  S  
                    Query_4644   271  GTTTCTGTCTTAGTTTGGACCGGGGAGTTTGTGGTGGTTTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTT  348
D  100.0% (9/9)     IGHD2-21*01  7    ----------------------------.........-----------------------------------------  15
J  97.6% (40/41)    IGHJ3*02     7    -------------------------------------.........C...............................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_294081

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           321     7e-90
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CGTACTGG	ATTACGATGTTTTGAGTGGTTAT	CC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCGTACTGGATTACGATGTTTTGAGTGGTTATCCCTACTTTGACTAC	AVLDYDVLSGYPYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	245	2	2	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  T  S  S  T  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_4645   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCACCAGCAGTACTTACTACTGGGCCTGGATCCGCCAGCCCCCCGGGAAGGGC  90
V  91.8% (225/245)  IGHV4-39*01  49   ...............................G........G...T....G...........G..................A........G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  S  G  G  S  T  Y  Y  N  P  S  L  E  S  R  I  T  V  S  I  A  T  S 
                    Query_4645   91   CTGGAGTGGATTGGGAGTATCTATTCTGGTGGGAGCACCTACTACAACCCGTCCCTCGAGAGTCGCATCACCGTTTCCATAGCCACGTCG  180
V  91.8% (225/245)  IGHV4-39*01  139  .........................A.A.............................A.......AG.....A.A...G...A......C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       R  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  V  L  D  Y  D  V  L  S 
                    Query_4645   181  AGGAACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGCCGTACTGGATTACGATGTTTTGAGT  270
V  91.8% (225/245)  IGHV4-39*01  229  .A.......................G...........................G...........-------------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  91.3% (21/23)    IGHD3-3*01   3    -------------------------------------------------------------------------........T...G....  19

                                      GT------------------>                                  
                                       G  Y  P  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4645   271  GGTTATCCCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  91.3% (21/23)    IGHD3-3*01   20   ......-------------------------------------------------  25
J  100.0% (47/47)   IGHJ4*02     2    --------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_294082

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           318     6e-89
IGHD5-12*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATTACATCGAGA	TGGCTAC	AATAGAGGAGTT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATTACATCGAGATGGCTACAATAGAGGAGTTTTTGCCTTC	ARELHRDGYNRGVFAF	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  R  T  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4646   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGGACCAATTACATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  91.1% (225/247)  IGHV3-53*01  47   ...........................................T.G...C........C..............................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      Q  W  V  S  L  I  H  S  G  G  T  T  S  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  K  S  T  
                    Query_4646   91   AGTGGGTCTCACTTATTCATAGTGGTGGGACCACGTCCTATTCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAAGTCCACTA  180
V  91.1% (225/247)  IGHV3-53*01  137  ...........G.....T....C.....T.G...A.A...CG........................................T....AG.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  V  Y  L  Q  M  V  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  L  H  R  D  G  Y  N  
                    Query_4646   181  ACACGGTATATCTTCAAATGGTCAACCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGAATTACATCGAGATGGCTACAATA  270
V  91.1% (225/247)  IGHV3-53*01  227  .....C.G............AA..G..........................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD5-12*01  11   -------------------------------------------------------------------------------.......----  17

                                      ---------------->                                  
                                      R  G  V  F  A  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_4646   271  GAGGAGTTTTTGCCTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  321
J  93.0% (40/43)    IGHJ4*02     6    --------....A..A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_294083

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           344     6e-97
IGHD2-15*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTAGCCGCCAAGACACGACT	AGGATATTG	AAGATT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTAGCCGCCAAGACACGACTAGGATATTGAAGATT	ARFSRQDTTRILKI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  D  P  G  K  G  L  
                    Query_4647   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTATATGAGCTGGATCCGTCAGGATCCAGGGAAGGGGCTGG  90
V  94.4% (234/248)  IGHV3-11*01  47   ....................................................C..............C....C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  G  N  S  G  G  A  I  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4647   91   AGTGGGTTTCATACATTGGTAATAGTGGTGGTGCCATATACTACGCAGAGTCTGTGAAAGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  94.4% (234/248)  IGHV3-11*01  137  .................A...G.......A..A................C........G...............................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  M  Y  Y  C  A  R  F  S  R  Q  D  T  T  
                    Query_4647   181  AGAAGTCACTTTATCTCCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATGTATTATTGTGCGAGATTTAGCCGCCAAGACACGACTA  270
V  94.4% (234/248)  IGHV3-11*01  227  ....C.....G.....G.................................G.......C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD2-15*01  1    -----------------------------------------------------------------------------------------.  1

                                      ------------->                                  
                                      R  I  L  K  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4647   271  GGATATTGAAGATTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (9/9)     IGHD2-15*01  2    ........----------------------------------------  9
J  100.0% (34/34)   IGHJ4*02     15   --------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_294084

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           399     3e-113
IGHD6-13*01                                                                                           18.0    0.68  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCG	GGGTATAGTAGC	CCCTGGCCAGGATGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGGGGTATAGTAGCCCCTGGCCAGGATGGCTTGACTAC	ARDPGYSSPWPGWLDY	294	341	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	9	77	69	68	1	0	98.6
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	293	117	108	6	3	92.3
CDR3-IMGT (germline)	294	301	8	8	0	0	100
Total	N/A	N/A	293	276	14	3	94.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  A  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_4648   9    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGCCTCCTGCAAGGCTTCTGGTTACACGTTTACCAGTTAT  98
V  94.2% (276/293)  IGHV1-18*01  7    ....................................................T........................C........C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  V  S  P  D  N  G  N  T  N  Y  D  I 
                    Query_4648   99   GGCATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGGTCAGCCCTGACAATGGTAACACAAACTATGATATA  188
V  94.2% (276/293)  IGHV1-18*01  97   ..T................................G..................A.....G..T.....................---C.  183
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y     A 

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                       E  K  F  Q  D  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T 
                    Query_4648   189  GAGAAGTTCCAGGACAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACG  278
V  94.2% (276/293)  IGHV1-18*01  184  C.....C......G............................................................................  273
                                       Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T 

                                      --------------><-------------------CDR3-IMGT------------------>                           
                                       A  I  Y  Y  C  A  R  D  P  G  Y  S  S  P  W  P  G  W  L  D  Y  W  G  Q  G  T  L  V  T  V 
                    Query_4648   279  GCCATTTATTACTGTGCGAGAGATCCGGGGTATAGTAGCCCCTGGCCAGGATGGCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTC  368
V  94.2% (276/293)  IGHV1-18*01  274  ...G.G.................-------------------------------------------------------------------  296
                                       A  V  Y  Y  C  A  R                                                                      
D  91.7% (11/12)    IGHD6-13*01  1    ---------------------------........C...---------------------------------------------------  12
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------...................................  41

                                             
                                       S  S  
                    Query_4648   369  TCCTCAG  375
J  100.0% (42/42)   IGHJ4*02     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_294085

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           360     1e-101
IGHD3-9*01                                                                                            37.2    9e-07 
IGHJ4*02                                                                                              56.4    3e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	GGGGAC	TACGATATTTTGACTGGTT	C	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	111	3	0	97.4
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  T  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4649   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACTTTCACTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (239/248)  IGHV3-15*01  47   .......T.............C....................G...............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  S  K  A  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_4649   91   AGTGGGTTGGCCGTATTAGAAGCAAAGCTGACGGTGGGACAACAGACTACGCTGCACCCGTTAAAGGCAGATTCACCATCTCAAGAGATG  180
V  96.4% (239/248)  IGHV3-15*01  137  ..................A.......A....T.............................G............................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT---------------------------------------------------->                      
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  A  D  T  A  V  Y  Y  C  G  D  Y  D  I  L  T  
                    Query_4649   181  ATTCAAAAAACACGCTATATCTGCAAATGAACAGCCTGAAAACCGCGGACACAGCCGTGTATTACTGTGGGGACTACGATATTTTGACTG  270
V  96.4% (239/248)  IGHV3-15*01  227  ................G............................A......................----------------------  294
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  100.0% (19/19)   IGHD3-9*01   5    --------------------------------------------------------------------------................  20

                                                                          
                                      G  S  G  P  G  T  L  V  T  V  S  S  
                    Query_4649   271  GTTCGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  306
D  100.0% (19/19)   IGHD3-9*01   21   ...---------------------------------  23
J  96.9% (31/32)    IGHJ4*02     17   ----.....A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_294087

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD5-18*01                                                                                           16.1    2.3  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACTAGGGCCCGGTCGCGCGC	GTGGATTCACCTAT	TATGCTCATT	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACTAGGGCCCGGTCGCGCGCGTGGATTCACCTATTATGCTCATTCTTTTGATATC	ARELGPGRARGFTYYAHSFDI	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  D  S  I  S  G  Y  Y  W  N  W  I  R  Q  P  P  E  K  G  L  E 
                    Query_4650   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGACTCCATCAGTGGTTACTACTGGAACTGGATCCGGCAGCCCCCAGAGAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...................C...........G..........A............G....................G.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  C  R  F  T  I  S  L  D  T  S  K  N 
                    Query_4650   91   TGGATTGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGTGTCGATTCACCATATCACTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*01  139  ........G.............................................A.....G...........G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  L  G  P  G  R  A  R  G 
                    Query_4650   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCAGCGGACACGGCCGTATATTACTGTGCGAGAGAACTAGGGCCCGGTCGCGCGCGTGGA  270
V  95.5% (234/245)  IGHV4-59*01  229  ................................T..............G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  85.7% (12/14)    IGHD5-18*01  1    -------------------------------------------------------------------------------------.....  5

                                      MGT-------------------------->                                  
                                       F  T  Y  Y  A  H  S  F  D  I  W  G  Q  G  P  V  V  S  V  S  S  
                    Query_4650   271  TTCACCTATTATGCTCATTCTTTTGATATCTGGGGCCAAGGGCCAGTGGTCTCCGTCTCTTCAG  334
D  85.7% (12/14)    IGHD5-18*01  6    .A..G....-------------------------------------------------------  14
J  93.3% (42/45)    IGHJ3*02     6    -------------------.......................A..A.....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_255675

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           338     5e-95
IGHD3-10*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCTTCAA	GTATTTCTATGGTTCGGGAAATTATTAT	CACGCCGCCAAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATCCCTTCAAGTATTTCTATGGTTCGGGAAATTATTATCACGCCGCCAAGTTTGACTCC	VRDPFKYFYGSGNYYHAAKFDS	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  K  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4651   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTCAAGAATTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-48*03  47   ....................................CC....GT.G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  T  T  G  T  I  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4651   91   AGTGGATTTCATACATTAGTACTACTGGCACTATCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCC  180
V  93.2% (233/250)  IGHV3-48*03  137  .....G...............G..G...T.G..C.......................................................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      Q  N  S  L  Y  L  Q  M  K  S  L  R  A  E  D  T  A  I  Y  Y  C  V  R  D  P  F  K  Y  F  Y  
                    Query_4651   181  AGAACTCACTGTATCTGCAAATGAAGAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGTAAGAGATCCCTTCAAGTATTTCTATG  270
V  93.2% (233/250)  IGHV3-48*03  227  .........................C........................G............CG.....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  89.3% (25/28)    IGHD3-10*01  1    -------------------------------------------------------------------------------.....A.....  11

                                      -CDR3-IMGT--------------------------->                                  
                                      G  S  G  N  Y  Y  H  A  A  K  F  D  S  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_4651   271  GTTCGGGAAATTATTATCACGCCGCCAAGTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  342
D  89.3% (25/28)    IGHD3-10*01  12   .......G.G.......-------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------.......A...............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_255676

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           374     8e-106
IGHD6-13*01                                                                                           21.8    0.041 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	GCAGCAGCTGG	AC	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCAGCAGCTGGACTACGACTACTACTACGGTATTGACGTC	ARGQQLDYDYYYGIDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	244	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4652   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAATACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.0% (244/249)  IGHV3-33*01  47   ..........................................G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  N  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4652   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACAATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  98.0% (244/249)  IGHV3-33*01  137  .........................................T...C............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  Q  Q  L  D  Y  D  
                    Query_4652   181  AGAACACGCTGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGCAGCAGCTGGACTACGACT  270
V  98.0% (244/249)  IGHV3-33*01  227  ...................A.................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  8    ----------------------------------------------------------------------...........---------  18
J  96.7% (58/60)    IGHJ6*02     3    -----------------------------------------------------------------------------------...T...  9

                                      T------------------>                                 
                                      Y  Y  Y  G  I  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4652   271  ACTACTACGGTATTGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.7% (58/60)    IGHJ6*02     10   .............G.......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_257987

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           424     8e-121
IGHD6-13*01                                                                                           14.1    9.1   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CA	AGCGGCATCTGGT	TGGGGG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGCGGCATCTGGTTGGGGGGACTCC	ARQAASGWGDS	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	280	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  N  P  G  A  S  V  K  V  S  C  R  A  P  G  Y  S  F  T  S  Y
                    Query_4653   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAACCCTGGGGCCTCAGTGAAGGTTTCCTGCAGGGCACCTGGATACAGCTTCACCAGCTA  90
V  96.9% (280/289)  IGHV1-46*01  6    ..................G..............G............................A....T.........C............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  L  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  D  Y  A  Q
                    Query_4653   91   CTATTTGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAGACTACGCACA  180
V  96.9% (280/289)  IGHV1-46*01  96   ....A..........................................................................AG.........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_4653   181  GAAGTTCCAGGGCAGAGTCACCATGACTAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  96.9% (280/289)  IGHV1-46*01  186  ...........................C..............................................................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        V  Y  Y  C  A  R  Q  A  A  S  G  W  G  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4653   271  CGTGTATTACTGTGCGAGACAAGCGGCATCTGGTTGGGGGGACTCCTGGGGCCAGGGAACCCTGGTCACCGTGTCCTCAG  350
V  96.9% (280/289)  IGHV1-46*01  276  ...................-------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                              
D  84.6% (11/13)    IGHD6-13*01  7    ---------------------...A...G.....----------------------------------------------  19
J  95.0% (38/40)    IGHJ4*02     9    ----------------------------------------....A...........................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_255670

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTATTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  N  H  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4654   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTAATCACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (222/245)  IGHV4-59*01  49   .......................................AG..G.T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  S  H  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  T  A  D  K  S  K  N 
                    Query_4654   91   TGGATTGCCTATATCTCTCACAGTGGGGGCACCAATTACAACCGCTCCCTCAAGAGTCGAGTCACCATAACAGCGGACAAGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  .......GG.......A.T........A.......C.......C.........................T...TA....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_4654   181  CAGTTTTCCCTGAAGGTGAGATCTGTGACCGCCGCGGACACGGCCGTATATTATTGTGCCAGAGAGGCCTACTCTTATTACGGTATGGAC  270
V  90.6% (222/245)  IGHV4-59*01  229  .....C.........C....C...........T..............G.....C.....G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  91.4% (53/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC..C............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_4654   271  GTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  306
J  91.4% (53/58)    IGHJ6*02     27   ...........A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_255671

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           327     8e-92
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTATTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  I  S  V  S  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4655   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTATCTCCGTCAGTAGTTACTACTGGGCCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*02  49   ...................C..........GG......................AG..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  T  A  D  K  S  K  N 
                    Query_4655   91   TGGATTGGTTATATCTATTCCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATAACAGCGGACAAGTCCAAGAAC  180
V  92.7% (227/245)  IGHV4-59*02  139  ........G..........A.................................................T...TA....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_4655   181  CAGTTTTCCCTGAAGGTGAGATCTGTGACCGCCGCGGACACGGCCGTATATTATTGTGCCAGAGAGGCCTACTCTTATTACGGTATGGAC  270
V  92.7% (227/245)  IGHV4-59*02  229  .....C.........C....C...........T..............G.....C.....G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  91.4% (53/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC..C............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_4655   271  GTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  306
J  91.4% (53/58)    IGHJ6*02     27   ...........A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_179679

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ2*01                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTTGGGCAGTATC	CTATGGTTCGGGGAGTTA	GGTTCGC	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACTTGGGCAGTATCCTATGGTTCGGGGAGTTAGGTTCGCGGTACTTCGATCTC	AKDLGSILWFGELGSRYFDL	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  Y  A  M  D  W  V  R  Q  P  P  G  K  G  L  
                    Query_4656   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACTATGCCATGGACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ..........................................G..G..........AG.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  R  G  D  N  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4656   91   AGTGGGTCTCAGCAATTAGTGGTCGTGGTGATAACACATTTTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  .............T.........A......G..G.....AC.................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  S  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  L  G  S  I  L  W  
                    Query_4656   181  AGAGTACGCTGTATCTGCAAATGGACAGCCTGAGAGCCGAAGACACGGCCGTATATTACTGTGCGAAAGACTTGGGCAGTATCCTATGGT  270
V  94.0% (235/250)  IGHV3-23*01  227  ...AC..................A................G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (18/18)   IGHD3-10*01  7    -----------------------------------------------------------------------------------.......  13

                                      R3-IMGT------------------------>                                  
                                      F  G  E  L  G  S  R  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4656   271  TCGGGGAGTTAGGTTCGCGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  336
D  100.0% (18/18)   IGHD3-10*01  14   ...........-------------------------------------------------------  24
J  100.0% (48/48)   IGHJ2*01     6    ------------------................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_255673

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           349     2e-98
IGHD3-10*01                                                                                           12.2    30   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TCGGGG	GGGGGCCGAGT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGGGGGGGGCCGAGTACTCCTTTGACTAC	ARDRGGAEYSFDY	230	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	23	1	0	95.8
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	24	0	0	100
FR3-IMGT	116	229	114	114	0	0	100
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	224	1	0	99.6


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_4657   13   GTCTGGATTCACCTTCAGGAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  99.6% (224/225)  IGHV3-33*01  72   ..................T.......................................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_4657   103  TGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAA  192
V  99.6% (224/225)  IGHV3-33*01  162  ..........................................................................................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------CDR3-IMGT-------------->              
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  G  G  A  E  Y  S  F  D  Y  W  G  Q  G  T
                    Query_4657   193  CAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGGGGGGGGGCCGAGTACTCCTTTGACTACTGGGGCCAGGGAAC  282
V  99.6% (224/225)  IGHV3-33*01  252  .............................................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (6/6)     IGHD3-10*01  14   ---------------------------------------------......---------------------------------------  19
J  97.9% (47/48)    IGHJ4*02     1    --------------------------------------------------------------...A........................  28

                                                          
                                        L  V  T  V  S  S  
                    Query_4657   283  CCTGGTCACCGTCTCCTCAG  302
J  97.9% (47/48)    IGHJ4*02     29   ....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_179677

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD3-10*01                                                                                           10.3    115  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGCCGTCA	GGGGA	CC	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGCCGTCAGGGGACCGGTTCGACCCC	ARWPSGDRFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	227	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  P  Y  Y  W  G  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_4658   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGACCTTACTACTGGGGCTGGATCCGGCAGACCCCGGGGAAGGGACTGGAG  90
V  93.4% (227/243)  IGHV4-59*01  49   .........................................TAG..........A..............C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  P  K  N 
                    Query_4658   91   TGGATTGGGTATATCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGCCCAAGAAC  180
V  93.4% (227/243)  IGHV4-59*01  139  ...............T.................................................................T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  Y  S  L  R  V  T  S  M  N  A  A  D  T  A  V  Y  Y  C  A  R  W  P  S  G  D  R  F  D  P 
                    Query_4658   181  CAGTACTCCCTCAGGGTGACCTCTATGAACGCTGCGGACACGGCCGTTTATTACTGTGCGAGATGGCCGTCAGGGGACCGGTTCGACCCC  270
V  93.4% (227/243)  IGHV4-59*01  229  ....T......G.A.C...G....G...C..................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-10*01  16   ------------------------------------------------------------------------.....-------------  20
J  100.0% (45/45)   IGHJ5*02     7    -------------------------------------------------------------------------------...........  17

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4658   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (45/45)   IGHJ5*02     18   ..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_179676

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            276     3e-76
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	96	18	0	84.2
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	211	35	0	85.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4659   1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  85.8% (211/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  S  M  S  V  D  K  S  K 
                    Query_4659   91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCAGCATGTCAGTAGACAAGTCCAAG  180
V  85.8% (211/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A............C...A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  N  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_4659   181  AATCAATTCTCCCTCACGCTGACGTCTCTGAACGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  85.8% (211/246)  IGHV4-4*01   229  ..C..G........G.A.....GC...G...C..................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_4659   271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_179675

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            313     1e-87
IGHD1-1*01                                                                                            10.3    119  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTACCAACTCCC	GGTAC	GCGGGGT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTACCAACTCCCGGTACGCGGGGTTTTGCCTAC	ARHLPTPGTRGFAY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	104	10	0	91.2
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	223	23	0	90.7


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  P  V  G  S  I  T  S  A  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4660  1    ACCCTGTCCCTCACCTGCGCTGTCCCCGTTGGCTCCATCACCAGTGCTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  90.7% (223/246)  IGHV4-4*02  49   ........................T.T.G...........G....AG.......................................G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  L  G  G  R  S  Y  Y  S  P  S  L  Q  S  R  V  T  L  S  I  D  T  S  R 
                    Query_4660  91   GAGTGGATTGGAGAAATCTATCTTGGTGGGCGTTCCTACTACAGCCCGTCCCTCCAGAGTCGAGTCACCCTGTCAATAGACACGTCCAGG  180
V  90.7% (223/246)  IGHV4-4*02  139  ...........G..........A.A.....A.CA..A......A..........A..............A.A...G......A.....A.  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  P  T  P  G  T  R 
                    Query_4660  181  AACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGAGACATCTACCAACTCCCGGTACGCGG  270
V  90.7% (223/246)  IGHV4-4*02  229  ................A.................................G...............------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (5/5)     IGHD1-1*01  1    ---------------------------------------------------------------------------------.....----  5

                                     ----------->                                  
                                      G  F  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4660  271  GGTTTTGCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02    6    ---....A......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_28700

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*02                                                                                            399     2e-113
IGHD2-2*01                                                                                            14.1    8.9   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*02	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAC	CAAAAT	TACCAGC	CAGGGTACGCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACCAAAATTACCAGCCAGGGTACGCTTACTTCGACTAC	AHQNYQPGYAYFDY	267	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	50	45	43	2	0	95.6
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	152	21	21	0	0	100
FR3-IMGT	153	266	114	112	2	0	98.2
CDR3-IMGT (germline)	267	272	6	6	0	0	100
Total	N/A	N/A	267	261	6	0	97.8


Alignments

                                     <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                      L  V  K  P  S  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  R  G  L  G  V  G  W  I  R 
                    Query_4661  6    CTGGTGAAGCCCTCACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTCGTGGACTGGGTGTGGGCTGGATCCGT  95
V  97.8% (261/267)  IGHV2-5*02  31   ........A...A..................................................A.....G....................  120
                                      L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R 

                                     ------FR2-IMGT---------------------><-----CDR2-IMGT-----><--------------------------------
                                      Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  S  T 
                    Query_4661  96   CAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGTCCACC  185
V  97.8% (261/267)  IGHV2-5*02  121  ....................................................................................CT....  210
                                      Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  L  T 

                                     --------------------FR3-IMGT----------------------------------------------------><--------
                                      I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  Q 
                    Query_4661  186  ATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACCAA  275
V  97.8% (261/267)  IGHV2-5*02  211  .......................................................................................---  297
                                      I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H    

                                     --------CDR3-IMGT--------------->                                  
                                      N  Y  Q  P  G  Y  A  Y  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_4661  276  AATTACCAGCCAGGGTACGCTTACTTCGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  342
D  100.0% (7/7)     IGHD2-2*01  16   ---.......---------------------------------------------------------  22
J  95.7% (44/46)    IGHJ4*02    3    ---------------------.....T...........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_179673

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     3e-93
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGGGTCCT	TATAGTGGGAGC	CCGCAAGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACTTC	AKPGPYSGSPQGYFDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4662   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTTCGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (230/248)  IGHV3-23*01  47   .............................................G..AT........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  T  E  T  G  R  N  S  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  
                    Query_4662   91   AGTGGGTCTCAACTATTACTGAGACTGGTCGTAATTCATACTACGCAGACTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCA  180
V  92.7% (230/248)  IGHV3-23*01  137  ...........G......G..GT.G....G...GCA............................G....C...............T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  G  P  Y  S  G  S  
                    Query_4662   181  AGAACACACTGTATCTGCAAATGAACACCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAACCGGGTCCTTATAGTGGGAGCC  270
V  92.7% (230/248)  IGHV3-23*01  227  .......G...................G........................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD1-26*01  3    -----------------------------------------------------------------------------............-  14

                                      T------------------>                                  
                                      P  Q  G  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4662   271  CGCAAGGGTACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.8% (45/46)    IGHJ4*02     3    --------..........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_255679

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           315     5e-88
IGHD6-19*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCAAC	GGGTATAGAAGTGGC	AGATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAACGGGTATAGAAGTGGCAGATAACTACTACTATGGTTTGGACGTC	AATGIEVADNYYYGLDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  H  G  M  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_4663   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAGTCATGGCATGCAGTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.0% (223/245)  IGHV3-30*03  47   ...........................................T..CT..........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  F  N  G  S  H  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_4663   91   AATGGTTGGCAGTTATCTCATTTAATGGAAGTCATACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  91.0% (223/245)  IGHV3-30*03  137  .G...G..........A....A.G........A...A...........................A......A..................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  A  L  Y  L  Q  M  A  S  L  R  S  A  D  T  A  V  Y  F  C  A  A  T  G  I  E  V  A  D  
                    Query_4663   181  AGAACGCACTGTATCTGCAAATGGCCAGCCTGAGATCTGCGGACACGGCTGTTTACTTCTGTGCGGCAACGGGTATAGAAGTGGCAGATA  270
V  91.0% (223/245)  IGHV3-30*03  227  .....A.G...............AA..........G...A............G..T.A.......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.3% (14/15)    IGHD6-19*01  1    ----------------------------------------------------------------------........C......-----  15

                                      GT-------------------->                                 
                                      N  Y  Y  Y  G  L  D  V  W  G  H  G  T  T  V  T  V  S  S 
                    Query_4663   271  ACTACTACTATGGTTTGGACGTCTGGGGCCACGGGACCACGGTCACCGTCTCCTCA  326
J  94.6% (53/56)    IGHJ6*02     7    ..........C...A................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_46731

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*06                                                                                           364     5e-103
IGHD3-10*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              62.2    6e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*06	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCCGTCACTGA	TTCGGGGAGTTGTTATAAC	TGT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCCGTCACTGATTCGGGGAGTTGTTATAACTGTCTTTGACTCC	AKPSLIRGVVITVFDS	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4664   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (240/247)  IGHV3-33*06  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4664   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.2% (240/247)  IGHV3-33*06  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  K  P  S  L  I  R  G  V  
                    Query_4664   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAAGCCGTCACTGATTCGGGGAGTTG  270
V  97.2% (240/247)  IGHV3-33*06  227  ........C.......................A...................G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.7% (18/19)    IGHD3-10*01  13   ------------------------------------------------------------------------------...........A  24

                                      T------------------>                                  
                                      V  I  T  V  F  D  S  W  G  R  G  T  V  V  S  V  S  S  
                    Query_4664   271  TTATAACTGTCTTTGACTCCTGGGGCCGGGGAACCGTGGTCTCCGTCTCCTCAG  324
D  94.7% (18/19)    IGHD3-10*01  25   .......-----------------------------------------------  31
J  90.9% (40/44)    IGHJ4*02     5    ----------........A........A.......C.....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_183698

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           333     1e-93
IGHD1-1*01                                                                                            12.2    34   
IGHJ5*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCGCTCCGAAAGAATTTAC	ACAACT	AGTATCTTTGAGAGGCCCAGGGTTGTGGC	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGCTCCGAAAGAATTTACACAACTAGTATCTTTGAGAGGCCCAGGGTTGTGGCCTGGCTCGACCCC	ARGRSERIYTTSIFERPRVVAWLDP	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  S  P  R  K  G  L  E 
                    Query_4665   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGCTACTACTGGAGTTGGATCCGCCAGTCCCCAAGGAAGGGCCTGGAG  90
V  93.5% (229/245)  IGHV4-34*01  49   ............................................T...........C............C.....G.......G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  S  N  Y  N  P  S  L  R  S  R  V  T  L  S  V  D  T  S  K  N 
                    Query_4665   91   TGGATTGGAGAAATCAATCATAGTGGAAGCTCCAACTATAACCCGTCCCTTAGGAGTCGAGTCACCTTATCCGTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-34*01  139  ........G.....................A.......C...........C.A.............A....A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  S  E  R  I  Y  T  T 
                    Query_4665   181  CAGTTCTCCCTGAGGCTGACCTCAGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCCGCTCCGAAAGAATTTACACAACT  270
V  93.5% (229/245)  IGHV4-34*01  229  .............A.....G...T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD1-1*01   4    ------------------------------------------------------------------------------------......  9

                                      CDR3-IMGT-------------------------------->                                  
                                       S  I  F  E  R  P  R  V  V  A  W  L  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_4665   271  AGTATCTTTGAGAGGCCCAGGGTTGTGGCCTGGCTCGACCCCTGGGGCCAGGGAACCCCAGTCACCGTCTCCTCAG  346
J  93.6% (44/47)    IGHJ5*02     5    -----------------------------....T........................TG................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_183699

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           372     2e-105
IGHD6-6*01                                                                                            10.3    124   
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TCGTC	GGCCGAACCCTTCTAACA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTCGGCCGAACCCTTCTAACAACTACTACAACGGTTTGGACGTC	ARDRRPNPSNNYYNGLDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_4666   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.6% (244/250)  IGHV3-11*06  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  S  T  S  Y  T  K  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4666   91   AGTGGGTTTCATACATTAGTACTAGTACTAGTTACACAAAGTACTCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (244/250)  IGHV3-11*06  137  .....................G.....G............C...G.............................................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  R  P  N  P  S  
                    Query_4666   181  AGAACTCACTGTTTCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGTCGGCCGAACCCTTCTA  270
V  97.6% (244/250)  IGHV3-11*06  227  ............A............C............................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD6-6*01   13   ----------------------------------------------------------------------.....---------------  17

                                      IMGT--------------------->                                 
                                      N  N  Y  Y  N  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4666   271  ACAACTACTACAACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  96.4% (54/56)    IGHJ6*02     7    ---........T.....A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_101286

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           296     2e-82
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GACTAGTGA	GATAGTAGTG	CTTGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGACTAGTGAGATAGTAGTGCTTGGTGCTTTCGATATG	ARETSEIVVLGAFDM	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	217	28	0	88.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  R  S  H  S  W  S  W  I  R  Q  P  P  G  K  G  M  E 
                    Query_4667   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGAGACTCCATCAGAAGTCATTCGTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGAATGGAG  90
V  88.6% (217/245)  IGHV4-59*01  49   ...................C.........T.G.........T...T.C.AC.......................A.........C.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  V  E  Y  R  G  G  S  N  Y  N  P  S  L  N  S  R  L  T  I  S  V  D  M  S  K  N 
                    Query_4667   91   TGGATTGGAAATGTCGAATACAGGGGAGGCTCCAACTACAACCCCTCCCTCAACAGTCGACTCACCATATCAGTGGACATGTCCAAGAAT  180
V  88.6% (217/245)  IGHV4-59*01  139  ........GT..A..T.T.....T..GA..A......................G......G.............A....C.........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  T  S  E  I  V  V  L  G 
                    Query_4667   181  CAGTTCTCCCTGAAGCTGAGCAGTGTGACCGCGGCGGACACGGCCGTCTATTACTGTGCGAGAGAGACTAGTGAGATAGTAGTGCTTGGT  270
V  88.6% (217/245)  IGHV4-59*01  229  .....................TC.........T..............G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  11   --------------------------------------------------------------------------..........------  20
J  95.6% (43/45)    IGHJ3*02     4    -----------------------------------------------------------------------------------------.  4

                                      ----------->                                
                                       A  F  D  M  W  G  Q  G  T  M  V  T  V  S  S
                    Query_4667   271  GCTTTCGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  314
J  95.6% (43/45)    IGHJ3*02     5    .....T.....C................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_47469

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           408     4e-116
IGHD3-22*01                                                                                           27.6    9e-04 
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCGGATC	ACTATGATAGTGGTGGT	C	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCGGATCACTATGATAGTGGTGGTCACTACTACTATAATATGGACGTC	ARVPDHYDSGGHYYYNMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	19	5	0	79.2
FR3-IMGT	175	288	114	111	3	0	97.4
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	278	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  A  T 
                    Query_4668   1    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCGCCACC  90
V  94.2% (278/295)  IGHV1-69*01  1    .....G.................G............................................................TT..G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  L  L  I  L  M  F  D  T  P  N  Y 
                    Query_4668   91   AACTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACTGCTCATCCTTATGTTTGATACACCAAACTAC  180
V  94.2% (278/295)  IGHV1-69*01  91   .G.....C.................................................GG.A......C...C....G....G........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  V  S  N  L  R  S  E  D 
                    Query_4668   181  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGGTGAGCAACCTGAGATCTGAGGAC  270
V  94.2% (278/295)  IGHV1-69*01  181  ..................................................................C......G................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  V  Y  Y  C  A  R  V  P  D  H  Y  D  S  G  G  H  Y  Y  Y  N  M  D  V  W  G  Q  G  T 
                    Query_4668   271  ACGGCCGTTTATTACTGTGCGAGAGTTCCGGATCACTATGATAGTGGTGGTCACTACTACTATAATATGGACGTCTGGGGCCAAGGGACC  360
V  94.2% (278/295)  IGHV1-69*01  271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.1% (16/17)    IGHD3-22*01  6    ----------------------------------...........A.....---------------------------------------  22
J  92.9% (52/56)    IGHJ6*02     7    ----------------------------------------------------..........CGG.........................  44

                                                        
                                       T  V  T  V  S  S 
                    Query_4668   361  ACAGTCACCGTCTCCTCA  378
J  92.9% (52/56)    IGHJ6*02     45   ..G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_47468

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           297     7e-83
IGHD1-26*01                                                                                           12.2    32   
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAC	GGGGGCTAC	CCCTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACGGGGGCTACCCCTATGATGCTCTTGACATC	ARDDGGYPYDALDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  P  G  F  S  I  R  D  Y  A  V  H  W  V  R  Q  A  P  G  T  G  L  
                    Query_4669   1    GGTCCCTGAGACTCTCCTGTGCAGCCCCAGGATTCAGTATCAGAGACTATGCTGTGCACTGGGTCCGCCAGGCTCCAGGCACGGGGCTGG  90
V  88.0% (220/250)  IGHV3-30*04  47   ..........................T.T.......CCT....TAG.......A...........................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  A  L  I  S  Y  D  G  T  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4669   91   ACTGGGTGGCTCTTATATCATATGATGGCACGAAGAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  88.0% (220/250)  IGHV3-30*04  137  .G........AG................A.GT..T..................................................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  E  T  V  Y  L  E  M  S  N  L  G  A  D  D  T  A  V  Y  F  C  A  R  D  D  G  G  Y  P  Y  
                    Query_4669   181  GGGAGACGGTGTATCTGGAAATGAGCAACCTGGGGGCTGACGACACGGCTGTCTATTTCTGTGCGAGAGATGACGGGGGCTACCCCTATG  270
V  88.0% (220/250)  IGHV3-30*04  227  A.A.C...C........C......A..G....A.A.....G...........G....A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD1-26*01  9    --------------------------------------------------------------------------...A.....-------  17
J  96.0% (48/50)    IGHJ3*02     1    ----------------------------------------------------------------------------------------..  2

                                      ------------->                                  
                                      D  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4669   271  ATGCTCTTGACATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  318
J  96.0% (48/50)    IGHJ3*02     3    .....T....T.....................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_183690

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4670   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_4670   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_4670   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4670   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_183691

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD2-21*01                                                                                           18.0    0.68  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	G	ATTGCGGTGGTG	TAGTGATGGAACTTGTTACTCTGGTTCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTAT	ARRLRWCSDGTCYSGSFEY	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  K  F  T  S  Y
                    Query_4671   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAAGTTTACCAGCTA  90
V  94.5% (274/290)  IGHV5-51*01  6    ..............................A........G.....................................GC...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  F  P  R  D  S  D  T  R  Y  N  P
                    Query_4671   91   TTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTCGTGACTCCGATACCAGATATAACCC  180
V  94.5% (274/290)  IGHV5-51*01  96   C......................T...........................G.......A....G.......T...........C.G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  D  Q  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  D  S  L  K  A  S  D  T  A
                    Query_4671   181  GTCCTTCCAAGACCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTACCTGCAGTGGGACAGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (274/290)  IGHV5-51*01  186  ...........G.......................A............................AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  R  L  R  W  C  S  D  G  T  C  Y  S  G  S  F  E  Y  W  G  Q  G  T  L  V
                    Query_4671   271  CATGTATTACTGTGCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTATTGGGGCCAGGGAACCCTGGT  360
V  94.5% (274/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD2-21*01  6    ---------------------....T.......---------------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------------------------.....C..C....................  34

                                                    
                                        T  V  S  S  
                    Query_4671   361  CACCGTCTCCTCAG  374
J  95.3% (41/43)    IGHJ4*02     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_47467

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           322     2e-90
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  G  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_4672   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTGGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGCAAGGGG  90
V  92.2% (225/244)  IGHV4-39*01  49   ...............................G.....T.....G.A...G.................................G......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  Y  S  R  I  T  Y  S  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4672   91   CTGGAGTGGATTGGGACTATCTATTATAGTAGAATTACCTACTCTGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCC  180
V  92.2% (225/244)  IGHV4-39*01  139  ................G.............G.G.GC.......ACA..........C.................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_4672   181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  92.2% (225/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4672   271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_47466

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           347     7e-98
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCT	GTGGCTGG	AAAAGCAGTCCG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTGTGGCTGGAAAAGCAGTCCGTGATGCTTTTGATATC	ARSVAGKAVRDAFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4673   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAAGGGCTGG  90
V  94.8% (235/248)  IGHV3-30*04  47   ............................................AG....................................G.......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  H  K  Y  Y  A  D  S  V  K  G  R  L  T  V  S  R  D  N  S  
                    Query_4673   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTCATAAATACTATGCAGACTCCGTGAAGGGCCGACTCACCGTCTCCAGAGACAATTCCG  180
V  94.8% (235/248)  IGHV3-30*04  137  ................................A..........C.....................T.....A.................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  T  L  Y  V  Q  V  N  S  L  R  P  E  D  T  A  M  Y  Y  C  A  R  S  V  A  G  K  A  V  
                    Query_4673   181  AGAACACGCTCTATGTGCAAGTGAACAGCCTGAGACCTGAGGACACGGCTATGTATTACTGTGCGAGATCTGTGGCTGGAAAAGCAGTCC  270
V  94.8% (235/248)  IGHV3-30*04  227  ..........G...C.....A..............G..............G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18

                                      ---------------->                                
                                      R  D  A  F  D  I  W  G  R  G  T  V  V  I  V  S  S
                    Query_4673   271  GTGATGCTTTTGATATCTGGGGCCGAGGGACAGTGGTCATCGTGTCTTC  319
J  91.7% (44/48)    IGHJ3*02     1    -.......................A.......A......C...C.....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_183694

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            346     2e-97
IGHD5-12*01                                                                                           12.2    31   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GAGCGGG	GTGGCT	CCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGAGCGGGGTGGCTCCCTGACTAC	VGGAGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4674   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGTGACTACTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-7*01   47   ....................................C.......AG...T.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  K  K  D  G  S  E  K  K  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4674   91   AGTGGGTGGCCATCATAAAGAAAGATGGAAGTGAGAAAAAGTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-7*01   137  ............A.......C.................T.C.................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  V  G  G  A  G  W  L  P  D  
                    Query_4674   181  AGAACTCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGTGGGAGGAGCGGGGTGGCTCCCTGACT  270
V  94.4% (235/249)  IGHV3-7*01   227  ...................A...A............C..........................C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD5-12*01  10   ----------------------------------------------------------------------------......--------  15
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4674   271  ACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   .........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_47460

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           307     1e-85
IGHD4-4*01                                                                                            21.8    0.042
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-4*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGATCCC	ACAGTAACTAC	AGATATC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCGATCCCACAGTAACTACAGATATCACTACAACTACCACGGCATGGACGTC	AKDRSHSNYRYHYNYHGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  T  G  L  
                    Query_4675   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACCTTCAGCAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCACAGGGCTGG  90
V  89.2% (223/250)  IGHV3-30*18  47   ............................T..............T..C..................................AG.......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  L  A  V  I  S  D  D  G  F  N  Y  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  L  
                    Query_4675   91   AGTCACTGGCAGTTATTTCAGATGATGGATTCAATTACCATTATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTTAC  180
V  89.2% (223/250)  IGHV3-30*18  137  ...GGG..........A...T........AGT...A.AT.C..............................A...............CCA  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      Q  K  T  L  D  L  Q  M  N  G  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  R  S  H  S  N  Y  
                    Query_4675   181  AGAAGACGCTGGATCTGCAAATGAATGGCCTGAGACCTGAGGACACGGCAGTGTATTACTGTGCGAAAGACCGATCCCACAGTAACTACA  270
V  89.2% (223/250)  IGHV3-30*18  227  ....C......T.............CA........G.............T....................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD4-4*01   6    ------------------------------------------------------------------------------...........-  16

                                      R3-IMGT------------------------>                              
                                      R  Y  H  Y  N  Y  H  G  M  D  V  W  G  Q  G  T  T  V  I  V  S 
                    Query_4675   271  GATATCACTACAACTACCACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCC  332
J  92.9% (52/56)    IGHJ6*02     4    ------.....T.....T....T...............................C.......  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_47463

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           361     4e-102
IGHD1-7*01                                                                                            16.1    2.2   
IGHJ2*01                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-7*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TCTCAGGGAGTCGG	GGAACTAC	GGAG	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTCTCAGGGAGTCGGGGAACTACGGAGTGGTACTTCGATCTC	ARVSGSRGTTEWYFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4676   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACTTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-74*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  M  K  S  D  G  S  S  T  S  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  A  
                    Query_4676   91   TGTGGGTCTCACGTATGAAAAGCGATGGAAGTAGCACAAGCTACGCGGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (240/249)  IGHV3-74*01  137  ................T..T..T.....G...........................A.................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  S  G  S  R  G  T  
                    Query_4676   181  GGAACACGTTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGTCTCAGGGAGTCGGGGAACTA  270
V  96.4% (240/249)  IGHV3-74*01  227  A.......C............................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-7*01   10   -----------------------------------------------------------------------------------.......  16

                                      T------------------>                                  
                                      T  E  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4676   271  CGGAGTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  100.0% (8/8)     IGHD1-7*01   17   .-----------------------------------------------------  17
J  100.0% (49/49)   IGHJ2*01     5    -----.................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_47462

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           346     2e-97
IGHD3-9*01                                                                                            12.2    31   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGA	ATATTT	CCCACGAGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGACGAATATTTCCCACGAGGCTTTCAGTAC	VRDEYFPRGFQY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	24	0	0	100
FR2-IMGT	51	101	51	51	0	0	100
CDR2-IMGT	102	125	24	22	2	0	91.7
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	233	227	6	0	97.4


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I 
                    Query_4677   15   TGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGTATT  104
V  97.4% (227/233)  IGHV3-74*01  64   ..........................................................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       N  D  D  G  S  S  T  R  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 
                    Query_4677   105  AATGATGATGGGAGTAGCACAAGGTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGTTGTATTTG  194
V  97.4% (227/233)  IGHV3-74*01  154  ...AG..................C.........................................................C.....C..  243
                                       N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 

                                      --------------------------------------------><-------------CDR3-IMGT------------>         
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  E  Y  F  P  R  G  F  Q  Y  W  G  Q 
                    Query_4677   195  CAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGTAAGAGACGAATATTTCCCACGAGGCTTTCAGTACTGGGGCCAG  284
V  97.4% (227/233)  IGHV3-74*01  244  ..............................................C......-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (6/6)     IGHD3-9*01   9    --------------------------------------------------------......----------------------------  14
J  95.5% (42/44)    IGHJ4*02     5    -----------------------------------------------------------------------....G.C............  23

                                                               
                                       G  T  L  V  T  V  S  S  
                    Query_4677   285  GGAACCCTGGTCACCGTCTCCTCAG  309
J  95.5% (42/44)    IGHJ4*02     24   .........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_311088

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           238     5e-65
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGC	AACC	TCGGGGAG	GACTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACCTCGGGGAGGACTCCCTACTACTATTACGGAATGGACGTC	ATSGRTPYYYYGMDV	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	18	8	0	69.2
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	12	9	0	57.1
FR3-IMGT	126	239	114	99	15	0	86.8
CDR3-IMGT (germline)	240	241	2	2	0	0	100
Total	N/A	N/A	238	195	43	0	81.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  M  S  G  G  S  F  N  G  Y  S  W  T  W  V  R  Q  R  P  G  K  G  L  E  
                    Query_4678   4    CCCTGAGACTCTCCTGCGCGATGTCTGGTGGGTCCTTCAATGGATATTCTTGGACCTGGGTCCGCCAGCGCCCCGGGAAGGGACTGGAGT  93
V  81.9% (195/238)  IGHV4-34*01  50   .....TCC...A.......TG.C.A..............G...T..C.AC....G....A.........C...A........G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  E  I  S  H  F  K  T  V  N  Y  N  P  T  L  L  G  R  V  N  I  S  I  D  T  S  K  N  
                    Query_4678   94   GGATTGCGGAAATCAGTCATTTTAAAACCGTTAATTACAACCCGACACTCTTGGGTCGAGTCAACATATCGATAGACACCTCCAAGAACC  183
V  81.9% (195/238)  IGHV4-34*01  140  ......G........A....AG.GG..G.ACC..C.........T.C...AA.A.........C......AG.......G..........  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  S  G  R  T  P  Y  Y  Y  Y  
                    Query_4678   184  ACTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGCGCAACCTCGGGGAGGACTCCCTACTACTATTACG  273
V  81.9% (195/238)  IGHV4-34*01  230  .G..........A.....G...........................G........T..--------------------------------  287
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (8/8)     IGHD3-10*01  14   --------------------------------------------------------------........--------------------  21
J  96.6% (56/58)    IGHJ6*02     5    ----------------------------------------------------------------------------.........C....  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4678   274  GAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  96.6% (56/58)    IGHJ6*02     19   .T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_311089

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           325     3e-91
IGHD3-22*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	230	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	24	0	0	100
FR3-IMGT	116	229	114	109	5	0	95.6
CDR3-IMGT (germline)	230	236	7	7	0	0	100
Total	N/A	N/A	224	216	8	0	96.4


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_4679   13   GTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  96.4% (216/224)  IGHV3-33*01  72   ...................AG..A..................................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N
                    Query_4679   103  TGGAAGTAATAAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACGTTGTATCTGCAAATGAA  192
V  96.4% (216/224)  IGHV3-33*01  162  ...............C.............................................T...........C................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------------------CDR3-IMGT---------------------
                                        S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  T  T  G  R  D  P  F  D  I
                    Query_4679   193  CAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATAT  282
V  96.4% (216/224)  IGHV3-33*01  252  .......A...................G................----------------------------------------------  295
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  88.9% (16/18)    IGHD3-22*01  5    -------------------------------------------------------..........G..G....-----------------  22
J  94.0% (47/50)    IGHJ3*02     1    ---------------------------------------------------------------------------....G..........  15

                                      >                                  
                                        W  G  Q  G  T  I  L  T  V  S  S  
                    Query_4679   283  CTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  317
J  94.0% (47/50)    IGHJ3*02     16   ..................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_101283

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            410     1e-116
IGHD2-15*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACTTAGGGCGAGGGGTC	GTGGTGGTAGC	CCTACCTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAACTTAGGGCGAGGGGTCGTGGTGGTAGCCCTACCTGGTACTTTGACTAC	ARELRARGRGGSPTWYFDY	273	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	158	27	25	2	0	92.6
FR3-IMGT	159	272	114	110	4	0	96.5
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	280	271	9	0	96.8


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  Y  S  A  A  W  N  W  
                    Query_4680   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGCGACAGTGTCTCTAGCTACAGTGCTGCTTGGAACTGGA  90
V  96.8% (271/280)  IGHV6-1*01   26   ....................................................G...............A.....................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  S  R  S  K  W  Y  T  D  Y  A  V  S  V  K  
                    Query_4680   91   TCAGGCAGTCGCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTCCAGGTCCAAGTGGTATACTGATTATGCAGTCTCTGTGAAGA  180
V  96.8% (271/280)  IGHV6-1*01   116  ..........C.....................................A.................A............A........A.  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  M  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_4680   181  GTCGAATGACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  96.8% (271/280)  IGHV6-1*01   206  .......A..................................................................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-----------------------CDR3-IMGT----------------------->                               
                                      C  A  R  E  L  R  A  R  G  R  G  G  S  P  T  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_4680   271  GCGCAAGAGAACTTAGGGCGAGGGGTCGTGGTGGTAGCCCTACCTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  360
V  96.8% (271/280)  IGHV6-1*01   296  .T........--------------------------------------------------------------------------------  305
                                      C  A  R                                                                                   
D  100.0% (11/11)   IGHD2-15*01  12   ---------------------------...........----------------------------------------------------  22
J  100.0% (46/46)   IGHJ4*02     3    -----------------------------------------------...........................................  45

                                         
                                      S  
                    Query_4680   361  CAG  363
J  100.0% (46/46)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_351799

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43D*01                                                                                          352     3e-99
IGHD2-21*02                                                                                           16.1    2.3  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43D*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAA	GGGTCTACGTCGGTT	TGGTGACT	CTCCTCGACGATCAC	ACGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGGGTCTACGTCGGTTTGGTGACTCTCCTCGACGATCACACGGGATGGACGTC	AKGLRRFGDSPRRSHGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	236	11	0	95.5


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  H  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4681    1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCACCTTTCATGATTATGCCATGCACTGGGTCCGTCAAGCTCCGGGGAAGGGTCTGG  90
V  95.5% (236/247)  IGHV3-43D*01  47   ......................A..................G................................................  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  S  L  I  S  W  D  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  S  D  K  R  
                    Query_4681    91   AGTGGGTCTCTCTTATTAGTTGGGATGGTGGCACCACATACTATGCAGACTCTGTGAAGGGTCGATTCACCATCTCCAGTGACAAGAGGA  180
V  95.5% (236/247)  IGHV3-43D*01  137  ...............................T.G...C.........................................A.....C..C.  226
                                       E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                       K  N  S  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  L  Y  F  C  A  K  G  L  R  R  F  G  D  
                    Query_4681    181  AAAACTCCCTGTATCTGCAAATGAACAGTCTGGGAGCTGAGGACACCGCCTTGTATTTCTGCGCAAAGGGTCTACGTCGGTTTGGTGACT  270
V  95.5% (236/247)  IGHV3-43D*01  227  ................................A........................A...T.....-----------------------  293
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (8/8)     IGHD2-21*02   13   ----------------------------------------------------------------------------------........  20

                                       -IMGT----------------------->                                 
                                       S  P  R  R  S  H  G  M  D  V  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_4681    271  CTCCTCGACGATCACACGGGATGGACGTCTGGGGCCAAGGGACCGCGGTCACCGTCTCCTCA  332
J  95.7% (45/47)    IGHJ6*02      16   ---------------....T........................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_311080

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           358     4e-101
IGHD3-10*01                                                                                           14.1    9.4   
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGCC	ACTATGG	GGATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATC	ARSHYGDAYWYLDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	94	20	0	82.5
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	258	29	0	89.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T  S  Y 
                    Query_4682   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATCTTCACCAGTTAT  91
V  89.9% (258/287)  IGHV1-18*01  7    .................................................................T..........C...T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  F  E  W  M  G  W  I  S  P  Y  N  G  N  T  A  Y  A  E 
                    Query_4682   92   GGAATCACTTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAGCCTACGCAGAG  181
V  89.9% (258/287)  IGHV1-18*01  97   ..T....GC...........................C.......................G.................AA...T...C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  F  T  V  A  T  E  T  S  P  N  K  A  F  M  E  L  R  S  L  E  A  D  D  T  A 
                    Query_4682   182  AAGTTCCAGGGCAGATTCACCGTGGCCACAGAGACTTCCCCGAACAAAGCCTTCATGGAGCTGCGGAGTCTGGAAGCTGACGACACGGCC  271
V  89.9% (258/287)  IGHV1-18*01  187  ...C...........G.....A..A.......C..A...A...G..C.....A..........A....C...AG.T..............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  S  H  Y  G  D  A  Y  W  Y  L  D  I  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4682   272  GTCTATTACTGTGCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  359
V  89.9% (258/287)  IGHV1-18*01  277  ..G..............-----------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                          
D  100.0% (7/7)     IGHD3-10*01  6    ----------------------.......-----------------------------------------------------------  12
J  96.2% (51/53)    IGHJ2*01     1    -----------------------------------..........T.....C....................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_101282

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            357     1e-100
IGHD2-2*01                                                                                            33.4    1e-05 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CT	TATTGTAGTAGTAGCATCTGCTA	CCA	TGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTTATTGTAGTAGTAGCATCTGCTACCATGACCAC	ATYCSSSICYHDH	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	237	9	0	96.3


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  V  T  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4683  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAGTCACCTTTAGTACCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.3% (237/246)  IGHV3-7*01  47   ................................T............G............................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  H  D  G  S  E  K  Y  Y  A  D  S  V  K  G  R  F  A  I  S  R  D  N  A  
                    Query_4683  91   AGTGGGTGGCCAACATAAAGCACGATGGAAGTGAGAAATACTATGCGGACTCTGTGAAGGGCCGATTCGCCATCTCCAGAGACAACGCCA  180
V  96.3% (237/246)  IGHV3-7*01  137  ......................A......................T......................A.....................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                     K  N  S  L  F  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  Y  C  S  S  S  I  C  
                    Query_4683  181  AGAACTCACTGTTTCTGCAAATGAGTAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGACTTATTGTAGTAGTAGCATCTGCT  270
V  96.3% (237/246)  IGHV3-7*01  227  ............A...........AC..........................G.............------------------------  292
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  91.3% (21/23)    IGHD2-2*01  5    --------------------------------------------------------------------.............C..G.....  26

                                     ---------->                                  
                                     Y  H  D  H  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4683  271  ACCATGACCACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  315
D  91.3% (21/23)    IGHD2-2*01  27   .--------------------------------------------  27
J  95.1% (39/41)    IGHJ4*02    8    ----....T...............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_311084

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           290     2e-80
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GTCGAGGGGG	ATTACTCTGATAGTGCCGGTTATTAC	CATGCAGTT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTCGAGGGGGATTACTCTGATAGTGCCGGTTATTACCATGCAGTTGACCTC	AVEGDYSDSAGYYHAVDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	15	9	0	62.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	215	30	0	87.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  A  F  L  D  S  E  W  N  W  F  R  H  A  P  G  K  G  L  
                    Query_4684   1    GGTCCCTGAGACTCTCCTGTGCTGCCTCCGGACTCGCATTTCTTGATTCTGAATGGAATTGGTTCCGCCACGCTCCAGGGAAGGGGCTGG  90
V  87.8% (215/245)  IGHV3-48*03  47   ......................A.....T...T..A.C..CAG.AG..A....AT...C...G.......G...................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  R  T  G  T  S  T  Y  Y  T  D  S  V  K  G  R  F  S  I  S  R  D  D  A  
                    Query_4684   91   AGTGGATTTCATACATCAGTAGGACAGGGACCAGCACATACTACACAGACTCTGTGAAGGGCCGATTCTCCATCTCCAGAGACGACGCCA  180
V  87.8% (215/245)  IGHV3-48*03  137  .....G..........T.....T.GT..T.GT.C..T.......G.......................A..............A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  V  E  G  D  Y  S  D  S  
                    Query_4684   181  AGAAGTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGGTCGAGGGGGATTACTCTGATAGTG  270
V  87.8% (215/245)  IGHV3-48*03  227  ....C............................................................-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  84.6% (22/26)    IGHD3-22*01  3    ---------------------------------------------------------------------------......A.......A  17

                                      IMGT--------------------->                                  
                                      A  G  Y  Y  H  A  V  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4684   271  CCGGTTATTACCATGCAGTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  84.6% (22/26)    IGHD3-22*01  18   GT.........-------------------------------------------------  28
J  97.5% (39/40)    IGHJ5*02     12   --------------------....C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_311086

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD1-1*01                                                                                            12.2    33   
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGCCCCGAAATATGGCTGTGGTCTTGGAGACGTGGGTCTCC	ACAACT	TT	GACCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGCCCCGAAATATGGCTGTGGTCTTGGAGACGTGGGTCTCCACAACTTTGACCCC	ASAPKYGCGLGDVGLHNFDP	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	222	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  S  Y  F  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_4685   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTAGTTACTTCTGGAGCTGGATTCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  91.7% (222/242)  IGHV4-59*01  49   ......................................C..........A............C..................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  L  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  I  D  T  P  K  N 
                    Query_4685   91   TGGATTGGGTATATCTATTATAGTGGACTCACCAAGTACAACCCGTCCCTCAAGAGTCGAGTCAGCATATCAATTGACACGCCCAAGAAC  180
V  91.7% (222/242)  IGHV4-59*01  139  ....................C.....GAG......C........C...................C.......G.A......T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       L  F  S  L  K  V  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  S  A  P  K  Y  G  C  G  L  G 
                    Query_4685   181  CTCTTCTCCCTGAAGGTGAGCTCTGTGACTGCTGCGGACACGGCCATTTATTACTGTGCGAGCGCCCCGAAATATGGCTGTGGTCTTGGA  270
V  91.7% (222/242)  IGHV4-59*01  229  .AG............C.............C...............G.G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               

                                      GT------------------------>                                  
                                       D  V  G  L  H  N  F  D  P  W  G  Q  G  P  L  V  T  V  S  S  
                    Query_4685   271  GACGTGGGTCTCCACAACTTTGACCCCTGGGGCCAGGGACCCCTGGTCACCGTCTCCTCAG  331
D  100.0% (6/6)     IGHD1-1*01   4    -------------......------------------------------------------  9
J  97.5% (39/40)    IGHJ5*02     12   ---------------------..................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_252370

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           397     8e-113
IGHD7-27*01                                                                                           14.1    9.5   
IGHJ2*01                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD7-27*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	CTGGGGA	ACCTGGGCGTCTTT	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTGGGGAACCTGGGCGTCTTTCTTCGATCTC	ARDWGTWASFFDL	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	70	5	0	93.3
CDR1-IMGT	78	101	24	18	6	0	75
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	110	4	0	96.5
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	275	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  M 
                    Query_4686   3    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTGTCATGCAAGGCGTCTGGTTATAGCTTTATG  92
V  92.9% (275/296)  IGHV1-18*01  1    ...G.T.....................................................C..C........T........C.C.....CC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       H  Y  G  I  S  W  V  R  Q  A  P  G  E  G  L  Q  W  M  G  W  I  R  A  D  N  G  D  T  N  Y 
                    Query_4686   93   CACTATGGTATTAGCTGGGTGCGACAGGCCCCTGGAGAAGGGCTTCAGTGGATGGGATGGATCAGAGCTGACAATGGTGACACAAACTAT  182
V  92.9% (275/296)  IGHV1-18*01  91   AG.........C........................C........G...................C...T........A...........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_4686   183  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGAGACACATCAACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  272
V  92.9% (275/296)  IGHV1-18*01  181  .........C........................C.........C.............................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  Y  C  A  R  D  W  G  T  W  A  S  F  F  D  L  W  G  R  G  S  L  V  T  V  S  S 
                    Query_4686   273  ACGGCCGTTTATTACTGTGCGAGAGACTGGGGAACCTGGGCGTCTTTCTTCGATCTCTGGGGCCGTGGCTCCCTGGTCACTGTCTCCTCA  362
V  92.9% (275/296)  IGHV1-18*01  271  ........G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD7-27*01  5    --------------------------.......---------------------------------------------------------  11
J  97.7% (43/44)    IGHJ2*01     10   -----------------------------------------------......................A....................  52

                                       
                                       
                    Query_4686   363  G  363
J  97.7% (43/44)    IGHJ2*01     53   .  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_106627

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           282     4e-78
IGHD3-10*01                                                                                           12.2    32   
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGC	AGTTAATAT	GAACGGACGCTACG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGCAGTTAATATGAACGGACGCTACGACTGGTTCGACCCC	ARDAVNMNGRYDWFDP	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  N  I  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4687   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCAATTTTAACATTTATGCCATGAACTGGGTCCGCCAGGCACCAGGGAAGGGGCTGG  90
V  86.0% (215/250)  IGHV3-23*01  47   ....................G...............CC....G..GC..........G...............T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  G  G  G  P  D  D  I  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4687   91   AGTGGGTCTCAGCTATTGGTGGCGGTCCTGATGACATCTTCTACGCGGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  86.0% (215/250)  IGHV3-23*01  137  .................A....TA..GG..G.AG..CA.A......A...........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  V  Y  L  Q  I  N  S  L  R  Y  E  D  T  A  I  Y  F  C  A  R  D  A  V  N  M  N  G  
                    Query_4687   181  AGAGTACAGTTTACTTGCAAATTAACAGCCTGAGATACGAAGACACGGCCATTTATTTCTGTGCGAGAGATGCAGTTAATATGAACGGAC  270
V  86.0% (215/250)  IGHV3-23*01  227  ...AC..GC.G..TC.......G............GC...G.........G.A....A........A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.9% (8/9)      IGHD3-10*01  20   -------------------------------------------------------------------------.....T...--------  28

                                      T------------------>                                  
                                      R  Y  D  W  F  D  P  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_4687   271  GCTACGACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCTCTGTCTCCTCAG  324
J  93.8% (45/48)    IGHJ5*02     4    ------.........................A.........A.C..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_252372

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           305     3e-85
IGHD1-26*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GAGCCCCCGAACA	TGGGAGCT	TG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCACAGGAGCCCCCGAACATGGGAGCTTGTTTGACAAC	VTGAPEHGSLFDN	249	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	13	11	0	54.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	104	10	0	91.2
CDR3-IMGT (germline)	249	255	7	5	2	0	71.4
Total	N/A	N/A	255	225	30	0	88.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  L  R  N  Y  A  M  S  W  V  R  Q  V  P  G  K  G  L  
                    Query_4688   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCCTTAGGAACTATGCCATGAGCTGGGTCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  88.2% (225/255)  IGHV3-15*01  47   .......T...........................A.TT.C..T...GCCTGG...................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  A  G  C  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_4688   91   AGTGGGTTGGCCGTATTAAGAGCAAAGCTGGATGTGGGACAACAGACTACGCTGCGCCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  88.2% (225/255)  IGHV3-15*01  137  ...................A......A...ATG......................A..................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      D  S  K  E  M  L  Y  L  Q  M  S  S  L  K  T  D  D  T  A  I  Y  Y  C  V  T  G  A  P  E  H  
                    Query_4688   181  ATTCAAAGGAAATGCTGTATTTGCAAATGAGCAGCCTGAAAACCGATGACACAGCCATATATTACTGTGTCACAGGAGCCCCCGAACATG  270
V  88.2% (225/255)  IGHV3-15*01  227  .......AA.C.C.......C.........A...............G.........G.G.........AC.....---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (8/8)     IGHD1-26*01  8    ----------------------------------------------------------------------------------------..  9

                                      GT-------------->                                  
                                      G  S  L  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4688   271  GGAGCTTGTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (8/8)     IGHD1-26*01  10   ......---------------------------------------------  15
J  97.7% (42/43)    IGHJ4*02     6    --------......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_106625

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           332     3e-93
IGHD6-19*01                                                                                           12.2    32   
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-19*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCTTG	GCACTGGCT	CCTCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATCGCTTGGCACTGGCTCCTCGTGCTTTCGATGTC	TRDRLALAPRAFDV	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	102	12	0	89.5
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	234	22	0	91.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  G  D  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4689   1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCAATTTTGGTGATTATGCTATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  91.4% (234/256)  IGHV3-49*04  47   ....................................CC...................G.....................G..........  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  L  G  F  I  R  T  T  A  Y  G  A  T  T  E  Y  A  A  S  V  E  D  R  L  T  I  S  R  D  
                    Query_4689   91   AGTGGTTAGGTTTCATAAGAACAACAGCTTATGGTGCGACAACAGAGTACGCCGCGTCTGTGGAGGACAGACTAACCATCTCAAGAGATG  180
V  91.4% (234/256)  IGHV3-49*04  137  .....G..........T....GC.A...........G.........A...............A.A.G....T.C................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  S  I  A  Y  L  R  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  T  R  D  R  L  A  L  
                    Query_4689   181  ATTCCAAAAGCATCGCCTATCTGCGAATGAACAGCCTGAAGAGTGAAGACACAGCCGTGTATTATTGTACTAGAGATCGCTTGGCACTGG  270
V  91.4% (234/256)  IGHV3-49*04  227  ........................A...............A.CC..G.................C...........--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  88.9% (8/9)      IGHD6-19*01  8    -----------------------------------------------------------------------------------...G...  14

                                      IMGT--------------->                                  
                                      A  P  R  A  F  D  V  R  G  Q  G  T  M  V  T  V  S  S  
                    Query_4689   271  CTCCTCGTGCTTTCGATGTCCGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
D  88.9% (8/9)      IGHD6-19*01  15   ..----------------------------------------------------  16
J  95.7% (45/47)    IGHJ3*01     4    -------......T......T.................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_106622

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           324     7e-91
IGHD3-10*01                                                                                           12.2    31   
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTACCTGGAGCACT	TGGTTC	CGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACCTGGAGCACTTGGTTCCGGACTACGGTATGGACGTC	ARDYLEHLVPDYGMDV	230	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	23	1	0	95.8
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	110	4	0	96.5
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	216	9	0	96


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  T  Y  G  M  H  W  A  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  W  Y  D
                    Query_4690   13   GTCTGGATTCACCTTCAGTACCTATGGCATGCACTGGGCCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCACTTATATGGTATGA  102
V  96.0% (216/225)  IGHV3-33*01  72   ....................G.................T.....................................G.............  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  V  Y  L  Q  M  N
                    Query_4690   103  TGGAAGTAAAAAGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCTAAGAATACGGTGTATCTGCAAATGAA  192
V  96.0% (216/225)  IGHV3-33*01  162  .........T..A..................................................C.....C...C................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-------------------CDR3-IMGT------------------>     
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  L  E  H  L  V  P  D  Y  G  M  D  V  W  G
                    Query_4690   193  CAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATTACCTGGAGCACTTGGTTCCGGACTACGGTATGGACGTCTGGGG  282
V  96.0% (216/225)  IGHV3-33*01  252  ...........................G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (6/6)     IGHD3-10*01  10   -----------------------------------------------------------......-------------------------  15
J  98.0% (49/50)    IGHJ6*02     13   --------------------------------------------------------------------......................  34

                                                                  
                                        Q  G  T  T  V  T  V  S  S 
                    Query_4690   283  CCAAGGGACCACGGTCACCGTCTCGTCA  310
J  98.0% (49/50)    IGHJ6*02     35   ........................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_106623

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4691   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ......................................C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_4691   91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P 
                    Query_4691   181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC  270
V  90.6% (221/244)  IGHV4-59*01  229  ...........G...C....C...........T............G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  95.7% (44/46)    IGHJ5*02     6    ------------------------------------------------------------------------------............  17

                                                                        
                                       W  G  Q  G  A  L  V  S  V  S  S  
                    Query_4691   271  TGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  304
J  95.7% (44/46)    IGHJ5*02     18   ............A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_167838

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           299     2e-83
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAGTTAT	CAGGGT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGGCTCCACCCC	ARSGSGSYQGWLHP	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	216	25	0	89.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  D  S  I  S  P  Y  Y  W  I  W  I  R  Q  P  P  G  K  R  L  E  
                    Query_4692   4    CCCTGAGACTCTCCTGTTCTGTCTCTGGTGACTCCATCAGTCCTTACTACTGGATCTGGATCCGGCAGCCCCCAGGGAAGAGACTGGAGT  93
V  89.6% (216/241)  IGHV4-59*01  50   .....TCC...A....CA............G..........AG...........G.........................G.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  H  I  F  Y  T  G  S  T  K  Y  K  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  K  
                    Query_4692   94   GGCTTGGCCATATCTTTTACACTGGGAGCACCAAATACAAGCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCCAGGAAGC  183
V  89.6% (216/241)  IGHV4-59*01  140  ..A....GT......A.....G............C.....C..........................A...G............A...C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  S  Y  Q  G  W  
                    Query_4692   184  AGTTCTCCCTGAAACTGCGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGGC  273
V  89.6% (216/241)  IGHV4-59*01  230  .............G...A.C.........................................-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (15/15)   IGHD3-10*01  11   -----------------------------------------------------------------...............----------  25
J  87.0% (40/46)    IGHJ5*02     6    --------------------------------------------------------------------------------------...T  9

                                      ------->                                  
                                      L  H  P  W  G  L  G  R  L  V  I  V  S  S  
                    Query_4692   274  TCCACCCCTGGGGCCTGGGAAGACTGGTCATCGTCTCCTCAG  315
J  87.0% (40/46)    IGHJ5*02     10   ..G............A.....CC.......C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_106621

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            434     4e-124
IGHD3-3*01                                                                                            19.9    0.18  
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGCCGGTCCTA	TTTTGGAGTG	ATACGAGAGCGGTGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGCCGGTCCTATTTTGGAGTGATACGAGAGCGGTGTTACTTTGACTAC	ARCRSYFGVIRERCYFDY	290	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	74	1	0	98.7
CDR1-IMGT	77	100	24	24	0	0	100
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	294	286	8	0	97.3


Alignments

                                     <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_4693  2    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACC  91
V  97.3% (286/294)  IGHV1-2*04  1    .......................G..................................................................  90
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                     GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                      G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  N  G  D  T  H  Y 
                    Query_4693  92   GGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAATGGTGACACACATTAT  181
V  97.3% (286/294)  IGHV1-2*04  91   .........................................................................G.....G....A.C...  180
                                      G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                     -----------------------------------------------FR3-IMGT-----------------------------------
                                      A  L  E  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  K  S  D  D 
                    Query_4693  182  GCACTGGAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAAATCTGACGAC  271
V  97.3% (286/294)  IGHV1-2*04  181  ....A.A........................................................................G..........  270
                                      A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                     -----------------><----------------------CDR3-IMGT--------------------->                  
                                      T  A  V  Y  Y  C  A  R  C  R  S  Y  F  G  V  I  R  E  R  C  Y  F  D  Y  W  G  Q  G  T  L 
                    Query_4693  272  ACGGCCGTGTATTACTGTGCGAGATGCCGGTCCTATTTTGGAGTGATACGAGAGCGGTGTTACTTTGACTACTGGGGCCAGGGAACCCTG  361
V  97.3% (286/294)  IGHV1-2*04  271  ........................------------------------------------------------------------------  294
                                      T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (10/10)   IGHD3-3*01  11   -----------------------------------..........---------------------------------------------  20
J  100.0% (46/46)   IGHJ4*02    3    ------------------------------------------------------------..............................  32

                                                     
                                      V  T  V  S  S  
                    Query_4693  362  GTCACCGTCTCCTCAG  377
J  100.0% (46/46)   IGHJ4*02    33   ................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_167836

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         360     1e-101
IGHD3-10*01                                                                                           10.3    115   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GA	GGGGA	CAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAGGGGACATTATGGACGTC	ARGGDIMDV	244	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4694     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  H  S  G  L  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  R  S 
                    Query_4694     91   CTGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACAGGTCC  180
V  96.0% (240/250)  IGHV4-30-2*01  139  ..............G......T...........AG..C.T...A......................G.......................  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                         K  N  Q  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  D  I  M  D  V 
                    Query_4694     181  AAGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAGGGGACATTATGGACGTC  270
V  96.0% (240/250)  IGHV4-30-2*01  229  ...........C.......A..................................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01    16   ------------------------------------------------------------------------.....-------------  20
J  100.0% (43/43)   IGHJ6*02       20   --------------------------------------------------------------------------------..........  29

                                                                         
                                         W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4694     271  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  303
J  100.0% (43/43)   IGHJ6*02       30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_167837

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         430     1e-122
IGHD1-7*01                                                                                            19.9    0.17  
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCGTCCGTATGG	CTGGAACTAC	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCGTCCGTATGGCTGGAACTACCCCTTTGACTAC	ARHRPYGWNYPFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  E  Y  S  F  T  S  Y
                    Query_4695     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGAATCTCCTGTAAGGGTTCTGAATACAGCTTTACCAGCTA  90
V  97.6% (282/289)  IGHV5-10-1*01  6    ...................................................G...................G..................  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_4695     91   CTGGATCAGCTGGGTGCGTCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  97.6% (282/289)  IGHV5-10-1*01  96   ..................C.......................................................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  T  D  K  S  I  N  T  A  Y  V  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4695     181  GTCCTTCCAAGGCCACGTCACCATCTCAACTGACAAGTCCATCAACACTGCCTACGTGCAGTGGAGCAGCCTCAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-10-1*01  186  ............................G...............G..........C................G.................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------CDR3-IMGT--------------->                                  
                                          M  Y  Y  C  A  R  H  R  P  Y  G  W  N  Y  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4695     271  CATGTATTACTGTGCGAGACATCGTCCGTATGGCTGGAACTACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  97.6% (282/289)  IGHV5-10-1*01  276  ...................----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                       
D  100.0% (10/10)   IGHD1-7*01     8    ---------------------------------..........----------------------------------------------  17
J  100.0% (44/44)   IGHJ4*02       5    ---------------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_167834

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD3-10*01                                                                                           10.3    116  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGCCGTCA	GGGGA	CC	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGCCGTCAGGGGACCGGTTCGACCCC	ARWPSGDRFDP	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	221	21	0	91.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  R  P  Y  Y  W  G  W  I  W  Q  T  P  G  K  G  L  E  
                    Query_4696   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGACCTTACTACTGGGGCTGGATCTGGCAGACCCCGGGGAAGGGACTGGAGT  93
V  91.3% (221/242)  IGHV4-59*01  50   .....TCC...A....C.......................TAG..........A........C.....C....A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  P  K  N  
                    Query_4696   94   GGATTGGGTATATCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGCCCAAGAACC  183
V  91.3% (221/242)  IGHV4-59*01  140  ..............T.................................................................T.........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  R  V  T  S  M  N  A  A  D  T  A  V  Y  Y  C  A  R  W  P  S  G  D  R  F  D  P  
                    Query_4696   184  AGTTCTCCCTCAGGGTGACCTCTATGAACGCTGCGGACACGGCCGTTTATTACTGTGCGAGATGGCCGTCAGGGGACCGGTTCGACCCCT  273
V  91.3% (221/242)  IGHV4-59*01  230  ..........G.A.C...G....G...C..................G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (5/5)     IGHD3-10*01  16   -----------------------------------------------------------------------.....--------------  20
J  100.0% (45/45)   IGHJ5*02     7    ------------------------------------------------------------------------------............  18

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4696   274  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (45/45)   IGHJ5*02     19   .................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_167830

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           279     3e-77
IGHD2-8*01                                                                                            12.2    33   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	C	GTATGC	GACGGAGTGAAATCGGCTTAGGTGGGG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGTATGCGACGGAGTGAAATCGGCTTAGGTGGGGACTTCTTTGACCAC	ARMRRSEIGLGGDFFDH	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	21	9	0	70
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	14	7	0	66.7
FR3-IMGT	130	243	114	96	18	0	84.2
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	212	34	0	86.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  V  N  Y  L  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4697   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAATAGTGTCAATTACCTCTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  86.2% (212/246)  IGHV4-31*03  49   .............................T..........GC....GTGG....TA..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  A  Y  Y  S  G  S  D  R  Y  N  P  S  L  K  N  R  V  S  M  S  L  D  T  S 
                    Query_4697   91   CTGGAGTGGATTGGGTACGCCTACTACAGTGGGAGTGATCGGTACAACCCATCCCTCAAGAATCGAGTTTCCATGTCACTAGATACGTCG  180
V  86.2% (212/246)  IGHV4-31*03  139  ..................AT...T...........CACCTAC........G..........G.......A....A...G....C.....T  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       R  N  Q  F  S  L  K  V  T  S  M  T  A  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  I  G 
                    Query_4697   181  AGGAATCAGTTCTCCCTGAAGGTGACCTCTATGACGGCCGCGGACACGGCCATCTATTACTGTGCGCGTATGCGACGGAGTGAAATCGGC  270
V  86.2% (212/246)  IGHV4-31*03  229  .A...C...............C...G....G....T...............G.G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (6/6)     IGHD2-8*01   20   -------------------------------------------------------------------......-----------------  25

                                      MGT-------------------->                                  
                                       L  G  G  D  F  F  D  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_4697   271  TTAGGTGGGGACTTCTTTGACCACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  328
J  93.8% (45/48)    IGHJ4*02     1    ----------...A.......T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_167831

Length=417
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           405     4e-115
IGHD3-9*01                                                                                            31.5    6e-05 
IGHJ6*03                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-9*01	IGHJ6*03	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGAAA	TACGATATTTTGACTG	ACTCGTACGCAAGTACATAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGAAATACGATATTTTGACTGACTCGTACGCAAGTACATATTACTACTACTCCATGGACGTC	ARGKYDILTDSYASTYYYYSMDV	291	359	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	69	2	0	97.2
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	295	5	5	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  M  K  V  S  C  K  A  S  G  D  T  F  N  F  
                    Query_4698   7    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGATGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAACTTCT  96
V  94.8% (274/289)  IGHV1-69*06  5    ...................G...........................G...........................G........G.AG..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      F  A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  H  Y  A  
                    Query_4698   97   TTGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGAACAACACACTACGCAC  186
V  94.8% (274/289)  IGHV1-69*06  95   A........G...............................................................T...G..A.........  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  R  V  T  F  T  A  D  K  S  T  S  T  A  Y  M  D  L  S  S  L  R  S  E  D  A  
                    Query_4698   187  AGAAGTTCCAGGGCAGAGTCACATTTACCGCGGACAAATCCACGAGCACAGCCTACATGGACCTGAGCAGCCTGAGATCTGAGGACGCGG  276
V  94.8% (274/289)  IGHV1-69*06  185  ......................GA.....................................G........................A...  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-----------------------------CDR3-IMGT----------------------------->       
                                      A  V  Y  Y  C  A  R  G  K  Y  D  I  L  T  D  S  Y  A  S  T  Y  Y  Y  Y  S  M  D  V  W  G  
                    Query_4698   277  CCGTGTATTACTGTGCGAGGGGGAAATACGATATTTTGACTGACTCGTACGCAAGTACATATTACTACTACTCCATGGACGTCTGGGGCC  366
V  94.8% (274/289)  IGHV1-69*06  275  ...................-----------------------------------------------------------------------  293
                                      A  V  Y  Y  C  A                                                                          
D  100.0% (16/16)   IGHD3-9*01   5    --------------------------................------------------------------------------------  20
J  94.4% (51/54)    IGHJ6*03     9    --------------------------------------------------------------..........A................A  36

                                                                
                                      Q  G  T  A  V  T  V  S  S 
                    Query_4698   367  AAGGGACCGCGGTCACCGTCTCCTCA  392
J  94.4% (51/54)    IGHJ6*03     37   ........A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40919688


Query= Query_20577

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            325     3e-91
IGHD3-9*01                                                                                            27.6    8e-04
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGC	TTTGAAT	TATTTCGACATTTTGACTGG	AAATGGGCAGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTTTGAATTATTTCGACATTTTGACTGGAAATGGGCAGGGCTACTTTGACTAT	ALNYFDILTGNGQGYFDY	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	104	10	0	91.2
CDR3-IMGT (germline)	241	242	2	2	0	0	100
Total	N/A	N/A	242	225	17	0	93


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  V  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4699  1    ACCCTGTCCCTCACCTGCGCTGTCTCCGGTGTCTCCATCAGCAGTTCTAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.0% (225/242)  IGHV4-4*02  49   ..........................T....G.............AG...C.......................................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  Y  R  G  S  T  N  Y  N  P  S  L  K  N  R  V  T  I  L  V  D  K  S  N 
                    Query_4699  91   GAGTGGATTGGGGAAATCTATTATAGGGGGAGCACCAATTACAACCCGTCCCTCAAGAATCGAGTCACCATATTAGTTGACAAGTCCAAC  180
V  93.0% (225/242)  IGHV4-4*02  139  .....................C....T...........C...................G..............C...A...........G  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  L  N  Y  F  D  I  L  T  G 
                    Query_4699  181  AATCAGTTCTCCCTAAAATTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGCGCTTTGAATTATTTCGACATTTTGACTGGA  270
V  93.0% (225/242)  IGHV4-4*02  229  ..C...........G..GC........................................T..----------------------------  290
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  90.0% (18/20)    IGHD3-9*01  2    ---------------------------------------------------------------------....A...T...........-  21

                                     GT--------------------->                                  
                                      N  G  Q  G  Y  F  D  Y  W  S  Q  G  T  L  V  T  V  S  S  
                    Query_4699  271  AATGGGCAGGGCTACTTTGACTATTGGAGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
J  95.7% (45/47)    IGHJ4*02    2    -----------............C...G..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_20571

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            417     6e-119
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	G	GGGTAT	GACGCTCCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGTATGACGCTCCGTTTGAGTAC	ARGGYDAPFEY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_4700   1    GCAGTTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTA  90
V  95.9% (279/291)  IGHV1-8*01   6    ....C.............G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  N  W  V  R  Q  A  T  G  Q  G  L  V  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_4700   91   TTATATCAACTGGGTGCGGCAGGCCACAGGACAAGGGCTTGTCTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACA  180
V  95.9% (279/291)  IGHV1-8*01   96   .G................A........T.............AG...............................................  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  V  T  G  D  T  S  I  S  T  V  Y  M  E  L  S  S  L  K  S  E  D  T  A
                    Query_4700   181  GAAGTTCCAGGGCAGAGTCACCGTGACCGGGGACACCTCCATAAGCACAGTCTACATGGAGCTGAGCAGCCTGAAATCTGAGGACACGGC  270
V  95.9% (279/291)  IGHV1-8*01   186  ......................A.....A..A..................C.......................G...............  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        V  Y  Y  C  A  R  G  G  Y  D  A  P  F  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4700   271  CGTGTATTACTGTGCGAGAGGGGGGTATGACGCTCCGTTTGAGTACTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  350
V  95.9% (279/291)  IGHV1-8*01   276  .....................-----------------------------------------------------------  296
                                        V  Y  Y  C  A  R  G                                                           
D  100.0% (6/6)     IGHD6-13*01  1    ----------------------......----------------------------------------------------  6
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------.....C....................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_223186

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD6-19*01                                                                                           21.8    0.040
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	C	ATAGAAGTGGCTGG	CCGTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACATAGAAGTGGCTGGCCGTTTGATGCTTTCGAGATC	ARHRSGWPFDAFEI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  Y  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_4701   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATTATCACTACTGGAGCTGGATCCGGCAGTCTCCAGGGAAGGGACTGGAG  90
V  93.8% (228/243)  IGHV4-59*01  49   ........................................G.AG.T.......................C.C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  I  Y  N  P  S  L  E  S  R  V  T  I  S  A  D  T  S  K  K 
                    Query_4701   91   TGGATTGGCTATATCTATTACAGTGGGAGCACCATCTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAG  180
V  93.8% (228/243)  IGHV4-59*01  139  ........G.........................A................A.....................T...............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  A  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  R  S  G  W  P  F  D  A 
                    Query_4701   181  CAGTTCTCCCTGAAGCTGAGCGCTGTAACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGACATAGAAGTGGCTGGCCGTTTGATGCT  270
V  93.8% (228/243)  IGHV4-59*01  229  .....................T....G....................G............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  5    ----------------------------------------------------------------....C.........------------  18
J  88.0% (44/50)    IGHJ3*02     1    -----------------------------------------------------------------------------------.......  7

                                      -------->                                  
                                       F  E  I  W  G  Q  G  I  K  V  S  V  S  S  
                    Query_4701   271  TTCGAGATCTGGGGCCAGGGGATAAAGGTCTCCGTCTCTTCAG  313
J  88.0% (44/50)    IGHJ3*02     8    ..T..T...........A....C..T....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_20573

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-9*01                                                                                            12.2    31   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAG	GACTGG	CTGATTCCTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGACTGGCTGATTCCTTACTACTTTGACTTC	ARAKDWLIPYYFDF	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_4702   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.8% (228/243)  IGHV4-59*01  50   .....TCC...A...........................................C..................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  N  I  Y  H  S  G  G  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_4702   94   GGATTGGCAATATCTATCACAGTGGGGGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAACC  183
V  93.8% (228/243)  IGHV4-59*01  140  .......GT........T........A..............................................A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  E  V  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  A  K  D  W  L  I  P  Y  Y  
                    Query_4702   184  AATTCTCCCTGGAGGTGAGCTCTGTGACCGCTGCGGACACGGCCATTTATTACTGTGCGAGAGCTAAGGACTGGCTGATTCCTTACTACT  273
V  93.8% (228/243)  IGHV4-59*01  230  .G.........A..C.............................G.G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD3-9*01   16   --------------------------------------------------------------------......----------------  21
J  97.9% (47/48)    IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4702   274  TTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.9% (47/48)    IGHJ4*02     7    ......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_95325

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            329     3e-92
IGHD3-3*01                                                                                            37.2    1e-06
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGCGACGTCCGGGTCC	TACGATTTTTGGAGTGGTT	CTGGTACTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGCGACGTCCGGGTCCTACGATTTTTGGAGTGGTTCTGGTACTCTTGACTAC	AREATSGSYDFWSGSGTLDY	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  T  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4703  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTAGTGGTACCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  90
V  92.3% (229/248)  IGHV4-4*02  49   ..................G...................C..C...A...A..............................G.........  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  S  H  S  G  S  T  K  Y  N  T  S  L  R  S  R  V  T  I  S  V  D  R  S  N 
                    Query_4703  91   GAGTGGATTGGAGAAATCTCTCATAGTGGGAGCACCAAGTACAACACGTCCCTCAGGAGTCGAGTCACCATATCAGTAGACAGGTCGAAC  180
V  92.3% (229/248)  IGHV4-4*02  139  ...........G.......A..................C......C.........A..........................A...C..G  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><-------------------------CDR3
                                      K  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  T  S  G  S  Y  D 
                    Query_4703  181  AAGCAGTTCTCCCTGAGATTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGAGGCGACGTCCGGGTCCTACGAT  270
V  92.3% (229/248)  IGHV4-4*02  229  ..C.............AGC...G.............................................----------------------  296
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (19/19)   IGHD3-3*01  5    ------------------------------------------------------------------------------------......  10

                                     -IMGT------------------------>                                  
                                      F  W  S  G  S  G  T  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4703  271  TTTTGGAGTGGTTCTGGTACTCTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  334
D  100.0% (19/19)   IGHD3-3*01  11   .............---------------------------------------------------  23
J  97.6% (41/42)    IGHJ4*02    7    ----------------------.....................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_126217

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_4704   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_4704   91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACAGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_4704   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_4704   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_293539

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           327     9e-92
IGHD1-1*01                                                                                            12.2    34   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCAGGAT	GTACAA	GTGCCAGGTGATCTGCGGATA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAGATCAGGATGTACAAGTGCCAGGTGATCTGCGGATATACTTCTACGGTTTGGACGTC	AADQDVQVPGDLRIYFYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	230	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  A  T  D  L  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4705   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCGCCACTGATCTTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.6% (230/251)  IGHV4-61*01  49   .......................................AG..G..G.AG........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  L  Y  Y  N  G  V  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  R  D  S  S 
                    Query_4705   91   CTGGAGTGGATTGGATATCTCTATTACAATGGGGTCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAAGAGACTCGTCC  180
V  91.6% (230/251)  IGHV4-61*01  139  ..............G...A.........G....AG...........................................GT....A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  M  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  A  D  Q  D  V  Q  V  P 
                    Query_4705   181  AAGAACCAGTTCTCCCTGAAGATGAACTCTGTGACCGCTGCGGACTCGGCCGTATATTATTGTGCGGCAGATCAGGATGTACAAGTGCCA  270
V  91.6% (230/251)  IGHV4-61*01  229  .....................C...G...................A.......G.....C......AG...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-1*01   2    ------------------------------------------------------------------------------......------  7

                                      CDR3-IMGT-------------------------->                                 
                                       G  D  L  R  I  Y  F  Y  G  L  D  V  W  G  L  G  T  T  V  T  V  S  S 
                    Query_4705   271  GGTGATCTGCGGATATACTTCTACGGTTTGGACGTCTGGGGCCTAGGGACCACGGTCACCGTCTCCTCA  339
J  94.4% (51/54)    IGHJ6*02     9    ---------------....A.......A...............A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_25204

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCGG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGGAACTGGTTCGACCCC	ARGGWRRQRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	219	26	0	89.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  F  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_4706   1    ACCCTGTCCCTCACCTGCGCTGTGTTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  89.4% (219/245)  IGHV4-34*01  49   .......................C.A..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  T  R  Y  N  P  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_4706   91   TGGATTGGGGAAATCAGTCATAGTGGAAGTACGAGGTACAACCCGGCCCTCAGGAGTCGGGTCACCATGTCAGTAGACACGTCCAAGAAG  180
V  89.4% (219/245)  IGHV4-34*01  139  ................A............C..C.AC.........T......A......A........A....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W 
                    Query_4706   181  CAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTACTGTGCGCGAGGGGGCTGGCGAAGACAGCGGAACTGG  270
V  89.4% (219/245)  IGHV4-34*01  229  ..GT...........C..A......T.....................G............A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4706   271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (48/49)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_293530

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            311     4e-87
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCATCTACCAACAC	CTGGTAC	TCGGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCATCTACCAACACCTGGTACTCGGGGCTTTGACTAC	ASHLPTPGTRGFDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  I  S  F  G  S  I  T  S  A  N  W  W  S  W  V  R  Q  P  P  G  R  G  V 
                    Query_4707   1    ACCCTGTCCCTCACCTGCGCTATTTCTTTTGGCTCCATCACCAGTGCTAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAGGGGGGTG  90
V  90.6% (222/245)  IGHV4-4*02   49   .....................G.C...GG...........G....AG...C...............................A....C..  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  Y  H  G  G  N  A  H  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  K  S  N 
                    Query_4707   91   GAGTGGATTGGGGAAGTATATCATGGTGGGAACGCGCACTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTGGACAAGTCCAAT  180
V  90.6% (222/245)  IGHV4-4*02   139  ...............A.C......A......G.A.CA...................G....................A...........G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  H  L  P  T  P  G  T  R 
                    Query_4707   181  AATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGCCATCTACCAACACCTGGTACTCGG  270
V  90.6% (222/245)  IGHV4-4*02   229  ..C.............A.................................G..............-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  A  L  V  S  V  S  S  
                    Query_4707   271  GGCTTTGACTACTGGGGCCAGGGAGCCCTGGTCAGCGTCTCCTCAG  316
J  95.5% (42/44)    IGHJ4*02     5    --......................A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_293532

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         338     5e-95
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	N/A	TTCGCCACACTTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTTCGCCACACTTCTTACTACTTCTACGCTTTGGACGTC	ARVRHTSYYFYALDV	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  H  P  P  G  K  G 
                    Query_4708     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCATCCCCCCGGGAAGGGC  90
V  93.2% (233/250)  IGHV4-30-4*01  49   ..................A..............................A........................G.....A.........  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  Y  I  G  Y  V  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  V  S  I  L  V  D  T  S 
                    Query_4708     91   CTGGAGTACATTGGGTACGTCTATTACAGTGGGACTACCTACTATAATAAGTCTCTCAAGAGTCGAGTTAGCATATTAGTAGACACGTCC  180
V  93.2% (233/250)  IGHV4-30-4*01  139  .......GG.........A...............GC........C..CCC...C................C.....C.............  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  H  T  S  Y  Y 
                    Query_4708     181  AAGAACCAGTTCTCCCTGAAGCTGAGATCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGTTCGCCACACTTCTTACTAC  270
V  93.2% (233/250)  IGHV4-30-4*01  229  ..........................C...........................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  93.0% (53/57)    IGHJ6*02       6    ------------------------------------------------------------------------------------......  11

                                        ----------------->                                 
                                         F  Y  A  L  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_4708     271  TTCTACGCTTTGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  321
J  93.0% (53/57)    IGHJ6*02       12   .A.....G.A..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_293535

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           361     4e-102
IGHD4-17*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCACTACAACGTT	TACGGTGACTAC	GGCGT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCACTACAACGTTTACGGTGACTACGGCGTTGATGCTTTTGATATC	ARDHYNVYGDYGVDAFDI	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	238	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  T  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4709   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCACCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (238/245)  IGHV4-59*01  49   .................................T........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  A  K  N 
                    Query_4709   91   TGGGTTGGGTATATCTATTACAGAGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGGCCAAGAAT  180
V  97.1% (238/245)  IGHV4-59*01  139  ...A...................T....G....................................................T.......C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  H  Y  N  V  Y  G  D  Y 
                    Query_4709   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCACTACAACGTTTACGGTGACTAC  270
V  97.1% (238/245)  IGHV4-59*01  229  ...................G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  5    ------------------------------------------------------------------------------............  16

                                      -------------------->                                  
                                       G  V  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4709   271  GGCGTTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  325
J  100.0% (50/50)   IGHJ3*02     1    -----..................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_293534

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         402     3e-114
IGHD2-21*02                                                                                           19.9    0.18  
IGHJ4*02                                                                                              56.4    4e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ATCGAGTCGAC	TGTGGCGGTGACT	ACTCTCCCCGACGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAATCGAGTCGACTGTGGCGGTGACTACTCTCCCCGACGGC	ARIESTVAVTTLPDG	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	76	72	70	2	0	97.2
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	295	6	5	1	0	83.3
Total	N/A	N/A	291	274	17	0	94.2


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  L  G  S  G  Y  N  F  T  N 
                    Query_4710     5    GTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTTTGGGTTCTGGATACAACTTTACCAAC  94
V  94.2% (274/291)  IGHV5-10-1*01  4    ...............................................................AA..............G........G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  W  I  N  W  V  R  Q  I  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  F  Y  T  N  Y  S 
                    Query_4710     95   TACTGGATCAATTGGGTGCGCCAGATTCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTTTTACACCAACTACAGT  184
V  94.2% (274/291)  IGHV5-10-1*01  94   ..........GC..............G..............................................C...T...........C  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  Q  G  H  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  S  S  R  R  A  S  D  T 
                    Query_4710     185  CCGTCCTTCCAAGGCCACGTCACCATTTCAGCTGACACGTCCATCAGCACTGCCTACCTCCAGTGGAGCAGCCGGAGGGCCTCGGACACC  274
V  94.2% (274/291)  IGHV5-10-1*01  184  ..........................C..........A.....................G.............T..A.............  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><-----------------CDR3-IMGT----------------->                              
                                         A  I  Y  Y  C  A  R  I  E  S  T  V  A  V  T  T  L  P  D  G  W  G  Q  G  T  M  V  I  V  S 
                    Query_4710     275  GCCATATATTACTGTGCGCGAATCGAGTCGACTGTGGCGGTGACTACTCTCCCCGACGGCTGGGGCCAGGGAACCATGGTCATCGTCTCC  364
V  94.2% (274/291)  IGHV5-10-1*01  274  .....G............A..---------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                      
D  92.3% (12/13)    IGHD2-21*02    8    --------------------------------.....T.......---------------------------------------------  20
J  94.3% (33/35)    IGHJ4*02       14   -----------------------------------------------------------................C......C.......  44

                                            
                                         S  
                    Query_4710     365  TCAG  368
J  94.3% (33/35)    IGHJ4*02       45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_293537

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  H
                    Query_4711   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATCA  90
V  92.4% (268/290)  IGHV5-51*01  6    ....................C........A.....................G.........A......C.........C.......GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  P
                    Query_4711   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCCC  180
V  92.4% (268/290)  IGHV5-51*01  96   ...................................................G.......A.....G.......G....C.....C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  A
                    Query_4711   181  GTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCGC  270
V  92.4% (268/290)  IGHV5-51*01  186  ...............G........C...................................G.......G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_4711   271  CTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  350
V  92.4% (268/290)  IGHV5-51*01  276  .A.......C.....G....------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    -----------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_293536

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           419     2e-119
IGHD1-1*01                                                                                            14.1    9.0   
IGHJ3*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-1*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCATATATAGT	CTGGAAC	C	TATCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCATATATAGTCTGGAACCTATC	ATIYSLEPI	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	286	277	9	0	96.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  L 
                    Query_4712   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGGTACACCTTTACCAGCCTT  91
V  96.9% (277/286)  IGHV1-18*01  7    .......................................................................T...............TA.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_4712   92   GGTTTCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAG  181
V  96.9% (277/286)  IGHV1-18*01  97   ...A...G..................................................................................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  D  R  V  S  V  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_4712   182  AAGCTCCAGGACAGAGTCTCCGTGACCACAGACACATCCACGAGCACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.9% (277/286)  IGHV1-18*01  187  ..........G.......A..A......................................C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------CDR3-IMGT-------->                                  
                                       V  Y  Y  C  A  T  I  Y  S  L  E  P  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_4712   272  GTGTATTACTGTGCGACCATATATAGTCTGGAACCTATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  344
V  96.9% (277/286)  IGHV1-18*01  277  ................---------------------------------------------------------  292
                                       V  Y  Y  C  A                                                           
D  100.0% (7/7)     IGHD1-1*01   8    ---------------------------.......---------------------------------------  14
J  97.4% (37/38)    IGHJ3*02     13   -----------------------------------...................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_96320

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            382     3e-108
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  R  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4713   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATCGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-7*01   47   ...........................................T......T.......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_4713   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  98.8% (247/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_4713   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  98.8% (247/250)  IGHV3-7*01   227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4713   271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_306380

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD1-20*01                                                                                           21.8    0.048 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTAAGACAGGGGTCACA	ATAACTGGAAC	AACTTGGGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAAGACAGGGGTCACAATAACTGGAACAACTTGGGGGTACTTTGACTAC	ARLKTGVTITGTTWGYFDY	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	71	0	0	100
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	111	3	0	97.4
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	291	283	8	0	97.3


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  N  
                    Query_4714   7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATATAGTTTTAGCAACT  96
V  97.3% (283/291)  IGHV5-51*01  5    ............................................................................C..C....C..G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  
                    Query_4714   97   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCC  186
V  97.3% (283/291)  IGHV5-51*01  95   ....................................................G............................G........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_4714   187  CGTCCTTCCAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCG  276
V  97.3% (283/291)  IGHV5-51*01  185  .........................C...................G............................................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------------CDR3-IMGT----------------------->                   
                                      A  M  Y  Y  C  A  R  L  K  T  G  V  T  I  T  G  T  T  W  G  Y  F  D  Y  W  G  Q  G  T  L  
                    Query_4714   277  CCATGTATTACTGTGCGAGACTTAAGACAGGGGTCACAATAACTGGAACAACTTGGGGGTACTTTGACTACTGGGGCCAGGGAACCCTGG  366
V  97.3% (283/291)  IGHV5-51*01  275  .....................---------------------------------------------------------------------  295
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (11/11)   IGHD1-20*01  4    --------------------------------------...........-----------------------------------------  14
J  97.8% (45/46)    IGHJ4*02     3    -----------------------------------------------------------...............................  33

                                                     
                                      V  T  V  S  S  
                    Query_4714   367  TCACCGTTTCCTCAG  381
J  97.8% (45/46)    IGHJ4*02     34   .......C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_96261

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           290     2e-80
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	214	29	0	88.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_4715   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAGT  93
V  88.1% (214/243)  IGHV4-59*01  50   .....TCC...A....C....................C...A..T.........GC....................G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N  
                    Query_4715   94   GGATTGGCTATCTCTATTACACTGGGAGTACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAATC  183
V  88.1% (214/243)  IGHV4-59*01  140  .......G...A.........G......C..........A..C.......A.....................TA...A..........C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P  
                    Query_4715   184  AGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCCT  273
V  88.1% (214/243)  IGHV4-59*01  230  ..........G...C....C...........T............G.G....A...........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD7-27*01  4    ----------------------------------------------------------------........------------------  11
J  95.7% (44/46)    IGHJ5*02     6    -----------------------------------------------------------------------------.............  18

                                                                       
                                      W  G  Q  G  A  L  V  S  V  S  S  
                    Query_4715   274  GGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  306
J  95.7% (44/46)    IGHJ5*02     19   ...........A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_96260

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4716   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ......................................C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_4716   91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P 
                    Query_4716   181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC  270
V  90.6% (221/244)  IGHV4-59*01  229  ...........G...C....C...........T............G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  95.7% (44/46)    IGHJ5*02     6    ------------------------------------------------------------------------------............  17

                                                                        
                                       W  G  Q  G  A  L  V  S  V  S  S  
                    Query_4716   271  TGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  304
J  95.7% (44/46)    IGHJ5*02     18   ............A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_96263

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD1-26*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCACTGC	GAGCTACT	CT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGCACTGCGAGCTACTCTTTTGACTAC	ARDRTASYSFDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  Y  Y  Y  W  S  W  I  R  Q  P  T  G  K  G  L  E  
                    Query_4717   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAATTATTACTACTGGAGTTGGATCCGGCAGCCCACAGGGAAGGGACTGGAGT  93
V  91.0% (222/244)  IGHV4-59*01  50   .....TCC...A...........................G.AG............C...............C..................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  V  F  Y  N  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  T  N  N  
                    Query_4717   94   GGATTGGATATGTCTTTTACAATGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGTTAGACACGACCAACAACC  183
V  91.0% (222/244)  IGHV4-59*01  140  .......G...A...A.....G.....G..........................................AG........T....G....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  K  L  N  S  V  T  T  A  D  T  A  V  Y  Y  C  A  R  D  R  T  A  S  Y  S  F  D  
                    Query_4717   184  AGTTCTCCCTAAAACTGAACTCTGTGACCACTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGCACTGCGAGCTACTCTTTTGACT  273
V  91.0% (222/244)  IGHV4-59*01  230  ..........G..G....G..........G..................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD1-26*01  11   -------------------------------------------------------------------------........---------  18
J  97.7% (42/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------.......  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_4717   274  ACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  309
J  97.7% (42/43)    IGHJ4*02     13   .......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_96262

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           316     2e-88
IGHD2-21*01                                                                                           10.3    123  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTTATCCTT	CATAT	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTTATCCTTCATATAACTACGGTATGGACGCC	ARSYPSYNYGMDA	255	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	254	129	106	8	15	82.2
CDR3-IMGT (germline)	255	260	6	6	0	0	100
Total	N/A	N/A	260	233	12	15	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4718   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAATTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.6% (233/260)  IGHV3-53*01  47   .................................................C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><------------------------------------------------------
                                      E  W  V  S  L  I  Y  S  G  P  S  T  Y  D  A  E  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  
                    Query_4718   91   AGTGGGTCTCACTTATTTATAGCGGTCCTAGCACATACGACGCAGAGACACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCA  180
V  89.6% (233/260)  IGHV3-53*01  137  ...........G..............GG........---------------.............C.........................  211
                                      E  W  V  S  V  I  Y  S  G  G  S  T                 Y  Y  A  D  S  V  K  G  R  F  T  I  S  

                                      -----FR3-IMGT------------------------------------------------------------><--------------C
                                      R  D  N  R  K  N  T  L  Y  L  Q  L  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  Y  P  
                    Query_4718   181  GGGACAATCGCAAGAACACACTGTATCTTCAATTGCACAGTCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGATCTTATCCTT  270
V  89.6% (233/260)  IGHV3-53*01  212  .A......TC.........G............A..A....C.......................................----------  291
                                      R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R           

                                      DR3-IMGT-------------->                                 
                                      S  Y  N  Y  G  M  D  A  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4718   271  CATATAACTACGGTATGGACGCCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
D  100.0% (5/5)     IGHD2-21*01  3    .....---------------------------------------------------  7
J  98.0% (49/50)    IGHJ6*02     13   ------...............T..................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_96264

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           413     2e-117
IGHD2-15*01                                                                                           21.8    0.048 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGTTTTTC	GGATATTGTAG	GGATGGAAATTGTTACGCACTGGAGTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGTTTTTCGGATATTGTAGGGATGGAAATTGTTACGCACTGGAGTAT	ARDRFFGYCRDGNCYALEY	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	280	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  T  F  T 
                    Query_4719   3    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACCTCTGGTTACACCTTTACC  92
V  94.6% (280/296)  IGHV1-18*04  1    ..................................A..................................G.T..................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  L  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  T  Y  N  G  N  T  N  Y 
                    Query_4719   93   AGTTACGGTCTCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCGGCACTTACAATGGGAACACAAACTAT  182
V  94.6% (280/296)  IGHV1-18*04  91   ..C......A...G.................................................A..G..........T............  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  L  E  L  R  S  L  R  S  D  D 
                    Query_4719   183  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCACAGATACATCCACGAGAACAGCGTACTTGGAGCTGAGGAGCCTGAGATCTGACGAC  272
V  94.6% (280/296)  IGHV1-18*04  181  .........C............................C...........C.....C...A.............................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  L  Y  Y  C  A  R  D  R  F  F  G  Y  C  R  D  G  N  C  Y  A  L  E  Y  W  G  Q  G  T 
                    Query_4719   273  ACGGCCCTATATTACTGTGCGAGAGATAGGTTTTTCGGATATTGTAGGGATGGAAATTGTTACGCACTGGAGTATTGGGGCCAGGGAACC  362
V  94.6% (280/296)  IGHV1-18*04  271  ......G.G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (11/11)   IGHD2-15*01  2    ------------------------------------...........-------------------------------------------  12
J  100.0% (34/34)   IGHJ4*02     15   ---------------------------------------------------------------------------...............  29

                                                         
                                       L  V  T  V  S  S  
                    Query_4719   363  CTGGTCACCGTCTCCTCAG  381
J  100.0% (34/34)   IGHJ4*02     30   ...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_96267

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4720   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ........................................G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_4720   91   TGGATTGGTTATGTCCATTACAGTGGAAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  ........G...A..T..........G....................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y 
                    Query_4720   181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTAC  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............C....C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4720   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_96266

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGCCGAAATC	GTATTACGACTTTTGGA	ATCCTTATTCTCGGCTCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCGAAATCGTATTACGACTTTTGGAATCCTTATTCTCGGCTCCTTCGACCCC	ARGGRNRITTFGILILGSFDP	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_4721   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGATCATTATTGGAGCTGGATCCGCCAGTCTCCAGGGAAGGGGCTGGAA  90
V  93.1% (228/245)  IGHV4-34*01  49   ...........................................G.T.C..C..................C.C.................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_4721   91   TGGATTGGGGAGATCAACCATAGTGGAAGCACCAACTACAACCCGTCTCTCAAGAGTCGAGTCACCATATCAGCGGACACGTCTAAGAAC  180
V  93.1% (228/245)  IGHV4-34*01  139  ...........A.....T.............................C.........................TA........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  K  L  I  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  G  R  N  R  I  T  T  F 
                    Query_4721   181  CAGTTCTCCCTGAAGCTGATCTCTGTGACCGCCGCAGACACGGCTGTATATTTCTGTGCGAGAGGGGGCCGAAATCGTATTACGACTTTT  270
V  93.1% (228/245)  IGHV4-34*01  229  ...................G...............G...........G....A............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  94.1% (16/17)    IGHD3-3*01   1    ----------------------------------------------------------------------------.........T....  14

                                      MGT-------------------------->                                  
                                       G  I  L  I  L  G  S  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_4721   271  GGAATCCTTATTCTCGGCTCCTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  334
D  94.1% (16/17)    IGHD3-3*01   15   ...-------------------------------------------------------------  17
J  97.7% (42/43)    IGHJ5*02     9    ---------------------.........................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_96269

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD3-22*01                                                                                           16.1    2.3   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCAC	ARAPPFDYDLDVRGIHNFDH	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	236	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4722   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (236/244)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_4722   91   TGGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAGC  180
V  96.7% (236/244)  IGHV4-59*01  139  ..........A.................G.............................................A.............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D 
                    Query_4722   181  CAGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGAC  270
V  96.7% (236/244)  IGHV4-59*01  229  ..................AG...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-22*01  6    ----------------------------------------------------------------------------........------  13

                                      GT------------------------>                                  
                                       V  R  G  I  H  N  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4722   271  GTAAGGGGAATCCACAACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  97.8% (44/45)    IGHJ4*02     4    ----------------........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_96268

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           299     2e-83
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTC	TAGCAGCATCTGG	GGTTGGCGCTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCTAGCAGCATCTGGGGTTGGCGCTCACTACTACGGTGCGGACGTC	ATLAASGVGAHYYGADV	230	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	48	3	0	94.1
CDR2-IMGT	92	115	24	24	0	0	100
FR3-IMGT	116	229	114	105	9	0	92.1
CDR3-IMGT (germline)	230	233	4	4	0	0	100
Total	N/A	N/A	221	206	15	0	93.2


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  L  T  F  S  I  Y  G  M  H  W  V  R  Q  A  P  D  R  G  L  E  W  V  A  V  I  W  Y  D
                    Query_4723   13   GTCTGGACTCACCTTCAGTATCTATGGAATGCACTGGGTCCGCCAGGCTCCAGACAGGGGACTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  93.2% (206/221)  IGHV3-33*01  72   .......T............G......C.........................G..A...G.............................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  D  T  L  Y  L  Q  M  N
                    Query_4723   103  TGGAAGTAATAAATTTTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGGACACGTTGTATCTGCAAATGAA  192
V  93.2% (206/221)  IGHV3-33*01  162  ..............AC...................................................A.....C................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------------CDR3-IMGT-------------------->  
                                        S  L  T  V  E  D  T  A  V  Y  Y  C  A  T  L  A  A  S  G  V  G  A  H  Y  Y  G  A  D  V  W
                    Query_4723   193  CAGTCTGACAGTGGAGGACACGGCTGTGTATTATTGTGCGACTCTAGCAGCATCTGGGGTTGGCGCTCACTACTACGGTGCGGACGTCTG  282
V  93.2% (206/221)  IGHV3-33*01  252  ...C....G..CC....................C.......-------------------------------------------------  292
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                   
D  92.3% (12/13)    IGHD6-13*01  6    --------------------------------------------........G....---------------------------------  18
J  96.2% (51/53)    IGHJ6*02     10   --------------------------------------------------------------------...........AT.........  31

                                                                     
                                        G  Q  G  T  T  V  T  V  S  S 
                    Query_4723   283  GGGCCAAGGGACCACGGTCACCGTCTCCTCA  313
J  96.2% (51/53)    IGHJ6*02     32   ...............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_96325

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           347     7e-98
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGAATCGAGGCC	TACTATGAAAGTAGTGGTTTTTAC	N/A	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGAATCGAGGCCTACTATGAAAGTAGTGGTTTTTACGACTAC	AKDGIEAYYESSGFYDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_4724   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGCTTCACCTTTAGCACCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  94.4% (236/250)  IGHV3-23*01  47   ...............................A.............G...........G.......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  G  S  N  T  Y  Y  A  D  P  V  K  G  R  F  T  I  S  R  D  N  Y  
                    Query_4724   91   AGTGGGTCTCAACTATTAGTGGGAGTGGTAGTAATACATACTACGCAGACCCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTACA  180
V  94.4% (236/250)  IGHV3-23*01  137  ...........G..........T......G...GC...............T....................................C..  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  G  D  T  A  L  Y  Y  C  A  K  D  G  I  E  A  Y  Y  
                    Query_4724   181  AGAACACGCTGTATCTGCAGATGAACAGCCTGAGAGCCGGGGACACGGCCCTATATTACTGTGCGAAAGATGGAATCGAGGCCTACTATG  270
V  94.4% (236/250)  IGHV3-23*01  227  ...................A...................A..........G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  91.7% (22/24)    IGHD3-22*01  5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                      E  S  S  G  F  Y  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_4724   271  AAAGTAGTGGTTTTTACGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  327
D  91.7% (22/24)    IGHD3-22*01  12   .T..........A....----------------------------------------  28
J  97.5% (39/40)    IGHJ4*02     9    -----------------..................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_316539

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           304     1e-84
IGHD3-3*01                                                                                            12.2    34   
IGHJ3*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGGAGT	CTTGGACCTTGATGACGGTGCCATCCAACAGATCGGTGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGAGTCTTGGACCTTGATGACGGTGCCATCCAACAGATCGGTGTTTTTGATAAG	ARDGVLDLDDGAIQQIGVFDK	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  N  T  Y  G  M  Y  W  I  R  Q  A  P  G  K  G  L  
                    Query_4725   1    GGTCCCTGAGACTCTCCTGTGTAGCATCTGGATTCTCCTTCAATACTTATGGCATGTATTGGATTCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  88.8% (222/250)  IGHV3-33*01  47   .....................C...G.........A......G..GC.........C.C...G.C.........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  W  H  D  G  S  Q  K  F  Y  V  D  S  V  K  D  R  F  T  V  S  R  D  N  S  
                    Query_4725   91   AGTGGGTGGCATCTATATGGCATGATGGAAGTCAGAAATTCTATGTAGACTCTGTGAAGGACCGATTCACCGTCTCCAGAGACAATTCCA  180
V  88.8% (222/250)  IGHV3-33*01  137  ...........GT.......T...........A.T....A.....C......C.......G..........A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      R  N  T  L  Y  L  Q  M  N  I  V  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  V  L  D  L  D  
                    Query_4725   181  GGAACACATTGTATCTGCAAATGAACATAGTGAGAGCCGAAGACACGGCTGTATATTACTGTGCGAGAGATGGAGTCTTGGACCTTGATG  270
V  88.8% (222/250)  IGHV3-33*01  227  A......GC..................GCC..........G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-3*01   14   ----------------------------------------------------------------------......--------------  19

                                      DR3-IMGT-------------------------->                                  
                                      D  G  A  I  Q  Q  I  G  V  F  D  K  C  G  Q  G  T  L  V  T  V  S  S  
                    Query_4725   271  ACGGTGCCATCCAACAGATCGGTGTTTTTGATAAGTGTGGCCAAGGGACATTGGTCACCGTCTCTTCAG  339
J  90.9% (40/44)    IGHJ3*02     7    -------------------------........TC..G............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_316538

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD5-12*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CATCC	GTGGATATGGTG	CTCCTGGGACGCAAGTTGT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACATCCGTGGATATGGTGCTCCTGGGACGCAAGTTGTCTACGGAATGGACGTC	ARDIRGYGAPGTQVVYGMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  A  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4726   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCACTAGTGCTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   .............................T..........GC....G...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  Q  S  R  I  T  I  S  Q  D  K  S 
                    Query_4726   91   CTGGAGTGGATTGGATACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCCAGAGTCGAATTACCATATCACAAGACAAGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ..............G..........................................A........G...........GT.....C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  I  R  G  Y  G  A 
                    Query_4726   181  AAGAACCAGTTCTCCCTGAACCTGAGCTCTGTGACGGCCGCGGACACGGCCGTATATTACTGTGCGAGGGACATCCGTGGATATGGTGCT  270
V  94.4% (237/251)  IGHV4-31*03  229  ....................G..............T.................G..............A..-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD5-12*01  1    ----------------------------------------------------------------------------........A...--  12

                                      DR3-IMGT------------------------>                                 
                                       P  G  T  Q  V  V  Y  G  M  D  V  W  G  H  G  T  R  V  T  V  S  S 
                    Query_4726   271  CCTGGGACGCAAGTTGTCTACGGAATGGACGTCTGGGGCCACGGGACCAGGGTCACCGTCTCCTCA  336
J  93.9% (46/49)    IGHJ6*02     14   -----------------......T.................A.......C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_8388

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ATTTCT	TATGGTTCGGGGAGT	CCCGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAATTTCTTATGGTTCGGGGAGTCCCGGGTGGTTCGCCCCC	ARISYGSGSPGWFAP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  K  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4727   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAAATACTTCTGGAGTTGGATCCGTCAGCCCCCCGGGAAGGGCCTGGAG  90
V  90.9% (221/243)  IGHV4-59*01  49   ...............................G.........T.GT....A......C........G........A........A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  I  G  T  T  S  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_4727   91   TGGATTGGTTACATCTATTACATTGGGACCACCAGCTACAACCCCTCCCTCGAGAGTCGCGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  90.9% (221/243)  IGHV4-59*01  139  ........G..T..........G.....G.....A................A.......A..............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  R  A  M  Y  Y  C  A  R  I  S  Y  G  S  G  S  P  G 
                    Query_4727   181  CAGTTCTCCCTGAAGCTAACGTCTGTGACCGCTGCGGACAGGGCCATGTATTACTGTGCGCGAATTTCTTATGGTTCGGGGAGTCCCGGG  270
V  90.9% (221/243)  IGHV4-59*01  229  .................G.GC...................C....G..............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (15/15)   IGHD3-10*01  8    ---------------------------------------------------------------------...............------  22

                                      ----------->                                  
                                       W  F  A  P  G  G  Q  G  T  L  F  P  V  S  S  
                    Query_4727   271  TGGTTCGCCCCCGGGGGCCAGGGAACCCTGTTCCCCGTCTCCTCAG  316
J  91.3% (42/46)    IGHJ5*02     6    .......A....T.................G..A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_8389

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_4728   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AGT.A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S 
                    Query_4728   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T.A....A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_4728   181  CAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ..............G.....C..................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4728   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_60966

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            341     6e-96
IGHD3-10*01                                                                                           12.2    33   
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCAACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCAACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	260	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	73	27	24	3	0	88.9
FR2-IMGT	74	124	51	49	2	0	96.1
CDR2-IMGT	125	145	21	17	4	0	81
FR3-IMGT	146	259	114	104	10	0	91.2
CDR3-IMGT (germline)	260	265	6	5	1	0	83.3
Total	N/A	N/A	264	241	23	0	91.3


Alignments

                                      <-----------------FR1-IMGT------------------><--------CDR1-IMGT--------><-----------------
                                       L  V  K  P  S  E  T  L  S  L  T  C  A  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q 
                    Query_4729   2    CTGGTGAAACCCTCGGAGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCACCAGTAACTGGTGGAGTTGGGTCCGCCAG  91
V  91.3% (241/264)  IGHV4-4*02   31   ........G..T....G.........................................G..GT...........................  120
                                       L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q 

                                      ---FR2-IMGT---------------------><-----CDR2-IMGT-----><-----------------------------------
                                       P  P  G  K  G  L  E  W  I  G  E  I  Y  H  G  G  A  T  N  Y  D  P  A  L  E  S  R  V  T  I 
                    Query_4729   92   CCCCCCGGGAAGGGTCTGGAGTGGATTGGGGAAATCTATCATGGTGGAGCCACCAACTACGACCCGGCCCTCGAGAGTCGAGTCACCATA  181
V  91.3% (241/264)  IGHV4-4*02   121  .....A........G...........................A....GAG..........A.....T.....A.................  210
                                       P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I 

                                      -----------------FR3-IMGT----------------------------------------------------><-----------
                                       S  V  D  K  S  N  N  Q  F  S  L  R  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L 
                    Query_4729   182  TCAGTAGACAAGTCCAACAACCAATTCTCCCTGAGGCTGACGTCTCTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATCTG  271
V  91.3% (241/264)  IGHV4-4*02   211  .................G.....G..........A.....GC...G...........................A.......A..------  294
                                       S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R       

                                      -----CDR3-IMGT--------------->                                  
                                       A  T  R  G  T  R  G  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_4729   272  GCAACACGTGGCACTCGGGGTTTTGATTCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  335
D  100.0% (6/6)     IGHD3-10*01  14   --------------......--------------------------------------------  19
J  93.0% (40/43)    IGHJ4*02     6    ---------------------.....C.A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_8382

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         366     2e-103
IGHD2-15*01                                                                                           18.0    0.64  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCACCTT	TATTGTAGT	TATGCCAGTATCGGCTGCTTGACCGGATGTTGCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGACCACCTTTATTGTAGTTATGCCAGTATCGGCTGCTTGACCGGATGTTGCCACTACTACGGTATGGACGTC	VRDHLYCSYASIGCLTGCCHYYGMDV	241	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	248	8	7	1	0	87.5
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  V  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_4730     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCGTCAGCAGTGGTTACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  97.2% (241/248)  IGHV4-38-2*02  49   ..................A.................A.....................................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 
                    Query_4730     91   GAGTGGATTGGGAGTATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAG  180
V  97.2% (241/248)  IGHV4-38-2*02  139  .......................................................................A..................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------------------
                                         N  Q  F  S  L  N  L  R  S  M  T  A  A  D  T  A  V  Y  Y  C  V  R  D  H  L  Y  C  S  Y  A 
                    Query_4730     181  AACCAGTTCTCCCTGAACCTGAGGTCTATGACCGCCGCAGACACGGCCGTGTATTACTGTGTGAGAGACCACCTTTATTGTAGTTATGCC  270
V  97.2% (241/248)  IGHV4-38-2*02  229  .................G.....C...G.................................C......----------------------  296
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD2-15*01    5    ---------------------------------------------------------------------------.........------  13

                                        -----CDR3-IMGT--------------------------------->                                 
                                         S  I  G  C  L  T  G  C  C  H  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4730     271  AGTATCGGCTGCTTGACCGGATGTTGCCACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  351
J  100.0% (53/53)   IGHJ6*02       10   ----------------------------.....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_8383

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     5e-96
IGHD6-19*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAGATATCTCC	TAGCAGTGGCTGGT	CAACACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGATATCTCCTAGCAGTGGCTGGTCAACACCTCTATTTGACTAC	ARQISPSSGWSTPLFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  T  Y  T  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_4731   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTACCTATACCATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (233/248)  IGHV3-21*01  47   ....................G........................G.....G....A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  S  F  I  N  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4731   91   AGTGGGTCTCATCCATCAGTAGTAGAGGTAGTTTCATAAATTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (233/248)  IGHV3-21*01  137  ................T........TA......A....T.C............G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  I  S  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  S  S  G  
                    Query_4731   181  AGAACTCACTGTATCTGCAAATAAGCAGCCTGAGAGGCGAGGACACGGCTGTTTATTACTGTGCGAGACAGATATCTCCTAGCAGTGGCT  270
V  94.0% (233/248)  IGHV3-21*01  227  ......................G.A...........C...............G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD6-19*01  6    -------------------------------------------------------------------------------...........  16

                                      GT-------------------->                                  
                                      W  S  T  P  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4731   271  GGTCAACACCTCTATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (14/14)   IGHD6-19*01  17   ...------------------------------------------------------  19
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_8380

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         378     3e-107
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GCCTTCGGG	ACTATGTTTCGGGGAATTA	CT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGCCTTCGGGACTATGTTTCGGGGAATTACTACAACTGGTTCGACCCC	ARGLRDYVSGNYYNWFDP	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4732     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-30-4*01  49   ..................A..............................A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4732     91   CTGGAGTGGATTGGGTACATCTATTACAGTGGAAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  98.4% (246/250)  IGHV4-30-4*01  139  ................................G.........................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R  G  L  R  D  Y  V  S 
                    Query_4732     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTGCTGTGCCAGAGGCCTTCGGGACTATGTTTCG  270
V  98.4% (246/250)  IGHV4-30-4*01  229  ..........................................................A...........--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.5% (17/19)    IGHD3-10*01    6    -------------------------------------------------------------------------------......G....  16

                                        -IMGT--------------------->                                  
                                         G  N  Y  Y  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4732     271  GGGAATTACTACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  89.5% (17/19)    IGHD3-10*01    17   ....G...-----------------------------------------------------  24
J  100.0% (51/51)   IGHJ5*02       1    ----------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_316532

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           302     3e-84
IGHD7-27*01                                                                                           18.0    0.59 
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CCGACTTGAAC	AACTGGGGA	TGGGCAGGGGAGGGTGTTTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCGACTTGAACAACTGGGGATGGGCAGGGGAGGGTGTTTATGATGTC	ATDLNNWGWAGEGVYDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	217	24	0	90


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  I  S  R  Y  Y  W  N  W  I  R  Q  P  P  G  K  A  M  E 
                    Query_4733   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGCCTCCATCAGTCGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGCAATGGAG  90
V  90.0% (217/241)  IGHV4-59*01  49   ...................C...........G..........A............G..........................G.C.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  T  Y  H  T  G  D  T  D  Y  N  P  S  L  R  N  R  V  A  I  S  M  D  A  S  K  N 
                    Query_4733   91   TGGATCGGATATACCTATCACACTGGGGACACCGACTACAACCCCTCCCTCAGGAATCGAGTCGCCATATCAATGGACGCGTCCAAGAAC  180
V  90.0% (217/241)  IGHV4-59*01  139  .....T..G....T....T...G....AG....A..................A..G.......A........G.A...A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  D  L  N  N  W  G  W  A  G 
                    Query_4733   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACGGCTGCGGACACGGCCGTATACTACTGCGCGACCGACTTGAACAACTGGGGATGGGCAGGG  270
V  90.0% (217/241)  IGHV4-59*01  229  .............................C.................G..T.....T....-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD7-27*01  3    ------------------------------------------------------------------------.........---------  11

                                      ----------------->                                  
                                       E  G  V  Y  D  V  W  G  Q  G  R  M  V  T  V  S  S  
                    Query_4733   271  GAGGGTGTTTATGATGTCTGGGGCCAAGGGAGAATGGTCACCGTCTCTTCAG  322
J  97.6% (40/41)    IGHJ3*01     10   -----------....................C....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_8386

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     7e-98
IGHD3-22*01                                                                                           25.7    0.003
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	TACTATAATCCTAGTGGTTATT	TCGGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACTATAATCCTAGTGGTTATTTCGGGTACTGGTACTTCGATCTC	ARDYYNPSGYFGYWYFDL	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	233	11	0	95.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E  
                    Query_4734   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  95.5% (233/244)  IGHV4-59*01  50   .....TCC...A....C..........................................A..............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  I  S  K  N  
                    Query_4734   94   GGATTGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGATATCTCCAAGAACC  183
V  95.5% (233/244)  IGHV4-59*01  140  .......G....................................................................C.CG..........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  Y  F  
                    Query_4734   184  AGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACTACTATAATCCTAGTGGTTATTTCG  273
V  95.5% (233/244)  IGHV4-59*01  230  ..................G.............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  86.4% (19/22)    IGHD3-22*01  5    -----------------------------------------------------------------......G..AG...........---  26

                                      ------------------->                                  
                                      G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4734   274  GGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  327
J  100.0% (52/52)   IGHJ2*01     2    --....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_316534

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD3-3*01                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTCCTG	TACGATTTTTGGAATGGT	CAGCAGTACTTTTTCAAGGGTTTA	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCTGTACGATTTTTGGAATGGTCAGCAGTACTTTTTCAAGGGTTTAGACGTC	ARVLYDFWNGQQYFFKGLDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  R  F  A  N  S
                    Query_4735   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGGTTTGCCAACTC  90
V  93.4% (270/289)  IGHV5-51*01  6    ..................................................A...........................C...A...G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  G  P
                    Query_4735   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGAAAAGGCCTGGAGTGGATGGGCGTCATCTACCCTGGTGACTCTGATACCAGATACGGCCC  180
V  93.4% (270/289)  IGHV5-51*01  96   ........G.....................G....................GA.......T........................A....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  G  L  R  A  S  D  T  A
                    Query_4735   181  GTCCTTCCAGGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTATCTTCACTGGAGCGGCCTGAGGGCCTCGGACACCGC  270
V  93.4% (270/289)  IGHV5-51*01  186  .........A..................................G.........C..G..G......A......A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  F  C  A  R  V  L  Y  D  F  W  N  G  Q  Q  Y  F  F  K  G  L  D  V  W  G  Q  G  T  S
                    Query_4735   271  CATGTATTTCTGTGCGAGAGTCCTGTACGATTTTTGGAATGGTCAGCAGTACTTTTTCAAGGGTTTAGACGTCTGGGGCCAAGGGACTTC  360
V  93.4% (270/289)  IGHV5-51*01  276  ........A..........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  94.4% (17/18)    IGHD3-3*01   5    -------------------------.............G....-----------------------------------------------  22
J  94.9% (37/39)    IGHJ6*02     24   -------------------------------------------------------------------....................CA.  46

                                                      
                                        V  T  V  S  S 
                    Query_4735   361  GGTCACCGTCTCCTCA  376
J  94.9% (37/39)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_316537

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           271     7e-75
IGHD4-17*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGCGGCAC	TGACTACATTGACTAC	GGGGAGGCCGCTCCACGGGAGGTG	GGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGACGGCGGCACTGACTACATTGACTACGGGGAGGCCGCTCCACGGGAGGTGGGTCTGGACGTC	VRDGGTDYIDYGEAAPREVGLDV	236	304	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	19	22	4	4	0	0	100
CDR1-IMGT	23	46	24	21	3	0	87.5
FR2-IMGT	47	97	51	47	4	0	92.2
CDR2-IMGT	98	121	24	17	7	0	70.8
FR3-IMGT	122	235	114	103	11	0	90.4
CDR3-IMGT (germline)	236	243	8	7	1	0	87.5
Total	N/A	N/A	225	199	26	0	88.4


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  N  G  Y  A  I  H  W  V  R  R  A  P  G  K  G  L  E  W  V  A  I  I  W  V  D
                    Query_4736   19   GTCTGGATTCACCTTCAATGGCTATGCCATACACTGGGTCCGCCGGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCCATTATTTGGGTTGA  108
V  88.4% (199/225)  IGHV3-33*01  72   .................G.A......G...G.............A..............................AG....A...TA...  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  K  N  Q  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  K  N  T  V  Y  L  Q  M  N
                    Query_4736   109  CGGAAAGAATCAAAACTATGCTGACTCCGTGAAGGGCCGATTCACCGTTTCCAGAGACAATTCCAAGAACACAGTGTATTTGCAAATGAA  198
V  88.4% (199/225)  IGHV3-33*01  162  T....GT...A..T.......A........................A.C.......................GC.....C..........  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------------------CDR3-IMGT--------------
                                        S  L  T  A  E  D  T  A  V  Y  Y  C  V  R  D  G  G  T  D  Y  I  D  Y  G  E  A  A  P  R  E
                    Query_4736   199  CAGCCTGACGGCCGAAGACACGGCTGTCTATTACTGTGTGAGAGACGGCGGCACTGACTACATTGACTACGGGGAGGCCGCTCCACGGGA  288
V  88.4% (199/225)  IGHV3-33*01  252  ........GA.....G...........G..........C......---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  87.5% (14/16)    IGHD4-17*01  1    ------------------------------------------------------.......GG.......--------------------  16

                                      --------------->                                 
                                        V  G  L  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_4736   289  GGTGGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  337
J  95.6% (43/45)    IGHJ6*02     18   ----...A..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_316536

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     7e-119
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	295	281	14	0	95.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  R  V  S  G  Y  S  F  T  
                    Query_4737   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAGGGTTTCTGGATACAGCTTTACCA  93
V  95.3% (281/295)  IGHV5-51*01  2    .................................A................................A..G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  
                    Query_4737   94   ACTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACA  183
V  95.3% (281/295)  IGHV5-51*01  92   G...........G...........................C....................C...................C........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  G  L  K  A  S  D  
                    Query_4737   184  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCGGCCTGAAGGCCTCGGACA  273
V  95.3% (281/295)  IGHV5-51*01  182  ...........C.....................................C...........G......A..A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  
                    Query_4737   274  CCGCCATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  363
V  95.3% (281/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  92.9% (13/14)    IGHD1-26*01  4    ---------------------------------..........C...-------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    --------------------------------------------------.......A................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_4737   364  CGGTCACCGTCTCCTCA  380
J  98.2% (56/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_209231

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           316     2e-88
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAA	TATTATTATGG	AGCGGACAATACTCCCTTTTTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGAATATTATTATGGAGCGGACAATACTCCCTTTTTCCTTGACTCC	ARDEYYYGADNTPFFLDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  F  G  F  S  F  S  D  Y  G  I  H  W  V  R  Q  A  P  G  K  G  P  
                    Query_4738   1    GGTCCCTGAGACTCTCCTGTGCCGCGTTTGGATTCAGCTTCAGTGACTATGGAATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCCGG  90
V  90.4% (226/250)  IGHV3-33*01  47   ......................A....C........C.......AG......C..G...............................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  M  V  W  Y  D  G  T  E  K  Y  V  A  D  S  V  K  G  R  F  T  L  S  R  D  N  S  
                    Query_4738   91   AGTGGGTGGCAATGGTCTGGTATGATGGAACTGAAAAATATGTAGCAGACTCCGTGAAGGGCCGATTCACCCTCTCCAGAGACAATTCCA  180
V  90.4% (226/250)  IGHV3-33*01  137  ...........G.TA.A.............G.A.T.....CTAT...........................A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  E  Y  Y  Y  G  A  
                    Query_4738   181  AGAACACGGTGTATTTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTCTATTACTGTGCGAGAGATGAATATTATTATGGAGCGG  270
V  90.4% (226/250)  IGHV3-33*01  227  ........C.....C.....................C...............G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD3-10*01  2    --------------------------------------------------------------------------.....C.....-----  12

                                      IMGT--------------------->                                  
                                      D  N  T  P  F  F  L  D  S  W  G  Q  G  T  L  V  T  V  Y  S  
                    Query_4738   271  ACAATACTCCCTTTTTCCTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTACTCAG  330
J  95.2% (40/42)    IGHJ4*02     7    ------------------......A.............................C.....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_209233

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           403     1e-114
IGHD3-3*01                                                                                            46.8    1e-09 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGCAGCCCTCCGGAG	ACGATTTTTGGAGTGGTTATTATA	GGTTTGG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGCAGCCCTCCGGAGACGATTTTTGGAGTGGTTATTATAGGTTTGGTGACTAT	ARLQPSGDDFWSGYYRFGDY	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	273	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  Y 
                    Query_4739   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCGACTAT  91
V  94.8% (273/288)  IGHV1-18*01  7    ....................................................................................AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  V  Y  S  D  T  T  N  H  A  Q 
                    Query_4739   92   GGGATCAACTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGCTGGATCAGCGTTTACAGTGATACCACAAACCATGCACAG  181
V  94.8% (273/288)  IGHV1-18*01  97   ..T....G...........................G..............A..........C.....A..G..A.......T........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  N  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_4739   182  AAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAACACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (273/288)  IGHV1-18*01  187  ...........................................G................C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------CDR3-IMGT------------------------>                  
                                       I  Y  Y  C  A  R  L  Q  P  S  G  D  D  F  W  S  G  Y  Y  R  F  G  D  Y  W  G  Q  G  T  L 
                    Query_4739   272  ATATATTACTGTGCGAGACTGCAGCCCTCCGGAGACGATTTTTGGAGTGGTTATTATAGGTTTGGTGACTATTGGGGCCAGGGAACCCTG  361
V  94.8% (273/288)  IGHV1-18*01  277  G.G...............------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (24/24)   IGHD3-3*01   6    ----------------------------------........................--------------------------------  29
J  97.6% (40/41)    IGHJ4*02     8    -----------------------------------------------------------------......C..................  32

                                                      
                                       V  T  V  S  S  
                    Query_4739   362  GTCACCGTCTCCTCAG  377
J  97.6% (40/41)    IGHJ4*02     33   ................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_96183

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD2-21*01                                                                                           12.2    33   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	T	GCATACTGT	AATATCATCAACTGCTCCCCGCGGGAAGGTG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATGCATACTGTAATATCATCAACTGCTCCCCGCGGGAAGGTGTTGACTTC	AKDAYCNIINCSPREGVDF	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  Y  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4740   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTTAGCTACTATGCCATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-23*01  47   ....................................CC......AG...........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  D  G  N  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_4740   91   AGTGGGTCTCAAGTATTAGTGGCAGTGATGGTAACACATATTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-23*01  137  ...........GC.........T....G.....G......C..............................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  M  Y  H  C  A  K  D  A  Y  C  N  I  I  
                    Query_4740   181  AGAACACGCTGTATCTGCAGATGAATAGCCTGAGAGTCGAGGACACGGCCATGTATCACTGTGCGAAGGATGCATACTGTAATATCATCA  270
V  92.0% (230/250)  IGHV3-23*01  227  ...................A.....C..........C.............G.A...T..........A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.9% (8/9)      IGHD2-21*01  2    -----------------------------------------------------------------------.....T...----------  10

                                      -IMGT----------------------->                                  
                                      N  C  S  P  R  E  G  V  D  F  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_4740   271  ACTGCTCCCCGCGGGAAGGTGTTGACTTCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  333
J  95.2% (40/42)    IGHJ4*02     7    ---------------------......A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_209237

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           427     1e-121
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	RDPYLDTAMVTTLTT	283	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	69	70	69	0	1	98.6
CDR1-IMGT	70	93	24	21	3	0	87.5
FR2-IMGT	94	144	51	51	0	0	100
CDR2-IMGT	145	168	24	24	0	0	100
FR3-IMGT	169	282	114	112	2	0	98.2
CDR3-IMGT (germline)	283	288	6	6	0	0	100
Total	N/A	N/A	289	283	5	1	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L   C  S  L  E  Q  R  *  K  S  P  G  S  L  *  R  S  P  V  R  V  L  D  T  P  *  P  T  
                    Query_4741   1    GCAGCTG-TGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  89
V  97.9% (283/289)  IGHV5-51*01  6    .......G.....................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                      T  G  S  A  G  C  A  R  C  P  G  K  A  W  S  G  W  G  S  S  I  L  V  T  L  I  P  H  T  A  
                    Query_4741   90   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  179
V  97.9% (283/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                      R  P  S  K  A  R  S  P  S  Q  S  T  S  P  S  A  P  P  T  C  S  G  A  A  *  R  P  R  T  P  
                    Query_4741   180  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  269
V  97.9% (283/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                      P  C  I  T  V  R  D  P  Y  L  D  T  A  M  V  T  T  L  T  T  G  A  R  E  P  W  S  P  S  P  
                    Query_4741   270  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  359
V  97.9% (283/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                      Q 
                    Query_4741   360  AG  361
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_209236

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            325     3e-91
IGHD6-13*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACCTGGTACTCGGGGTTTTGACTAC	ARHLGTPGTRGFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	22	2	3	81.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	246	229	14	3	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_4742   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  87
V  93.1% (229/246)  IGHV4-4*02   49   ...............................G.....T........GTA.......................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  S  Y  H  S  G  R  T  N  Y  N  A  S  F  Q  S  R  V  T  I  S  V  D  T  S  K 
                    Query_4742   88   GAGTGGATTGGGGAATCCTATCATAGTGGGCGCACCAACTACAACGCGTCCTTCCAGAGTCGAGTCACCATATCAGTAGACACGTCCAAG  177
V  93.1% (229/246)  IGHV4-4*02   139  ...............AT.............A..............C.....C..A...........................A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  P  G  T  R 
                    Query_4742   178  AATCAATTCTCCCTGAATCTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACCTGGTACTCGG  267
V  93.1% (229/246)  IGHV4-4*02   229  ..C..G...........G....G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4742   268  GGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (43/43)   IGHJ4*02     6    ---...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_209239

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           299     3e-83
IGHD3-3*01                                                                                            21.8    0.042
IGHJ5*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGATGGGGAAGAG	ACGATTTTTGG	GATGGGGTGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGATGGGGAAGAGACGATTTTTGGGATGGGGTGAGGTTCGACTCT	ARARWGRDDFWDGVRFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	220	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  G  S  G  L  S  L  R  G  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4743   1    GGTCCCTGAGACTCTCCTGTACAGGCTCTGGACTCAGTCTCAGAGGCTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTG  90
V  88.4% (220/249)  IGHV3-48*03  47   ....................G...C.......T...CCT....TA.T...........C.............................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  S  G  S  T  R  H  Y  A  D  S  L  K  G  R  L  T  I  S  R  D  N  A  
                    Query_4743   91   AATGGATTTCATACATCAGTAGTAGCGGCAGTACCAGACATTACGCAGACTCTTTGAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  88.4% (220/249)  IGHV3-48*03  137  .G...G..........T........T..T.......T.T.C............G...........T........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      N  N  S  V  Y  L  Q  M  N  S  L  R  V  A  D  T  A  V  Y  H  C  A  R  A  R  W  G  R  D  D  
                    Query_4743   181  ACAATTCAGTATATCTGCAGATGAACAGCCTGAGAGTCGCGGACACGGCTGTTTATCACTGTGCGAGAGCCCGATGGGGAAGAGACGATT  270
V  88.4% (220/249)  IGHV3-48*03  227  .G..C...C.G........A................C..A................T............---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-3*01   6    ------------------------------------------------------------------------------------......  11

                                      IMGT--------------------->                                  
                                      F  W  D  G  V  R  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4743   271  TTTGGGATGGGGTGAGGTTCGACTCTTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  330
D  100.0% (11/11)   IGHD3-3*01   12   .....-------------------------------------------------------  16
J  93.3% (42/45)    IGHJ5*01     7    ---------------..........C........A....C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_209238

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            355     3e-100
IGHD3-16*01                                                                                           12.2    31    
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGGC	GGGGGA	CCTACCGTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGCGGGGGACCTACCGTGTTTGACTAC	ARGGGGPTVFDY	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  S  K  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_4744   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGTAGTAAATGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  96.0% (237/247)  IGHV4-4*02   49   ...............................G..................C.......G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  Y  H  S  G  S  S  N  Y  S  P  S  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_4744   91   GAGTGGATTGGGGATATCTATCATAGTGGGAGCTCCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  96.0% (237/247)  IGHV4-4*02   139  ..............A..................A.........A..........A...................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  G  P  T  V  F 
                    Query_4744   181  AATCAGTTCTCCCTGAAGCTGACATCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCGGCGGGGGACCTACCGTGTTT  270
V  96.0% (237/247)  IGHV4-4*02   229  ..C...................GC...........................................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------------......------------  23
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4744   271  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (43/43)   IGHJ4*02     9    ........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_96185

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAGTTAT	CAGGGT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGGCTCCACCCC	ARSGSGSYQGWLHP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  P  Y  Y  W  I  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4745   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGTCCTTACTACTGGATCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.1% (223/242)  IGHV4-59*01  49   ..................A............G..........AG...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  H  I  F  Y  T  G  S  T  K  Y  K  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  K 
                    Query_4745   91   TGGCTTGGCCATATCTTTTACACTGGGAGCACCAAATACAAGCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCCAGGAAG  180
V  92.1% (223/242)  IGHV4-59*01  139  ...A....GT......A.....G............C.....C..........................A...G............A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  S  Y  Q  G  W 
                    Query_4745   181  CAGTTCTCCCTGAAACTGCGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGG  270
V  92.1% (223/242)  IGHV4-59*01  229  ..............G...A.C.........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (15/15)   IGHD3-10*01  11   ------------------------------------------------------------------...............---------  25
J  87.0% (40/46)    IGHJ5*02     6    ---------------------------------------------------------------------------------------...  8

                                      -------->                                  
                                       L  H  P  W  G  L  G  R  L  V  I  V  S  S  
                    Query_4745   271  CTCCACCCCTGGGGCCTGGGAAGACTGGTCATCGTCTCCTCAG  313
J  87.0% (40/46)    IGHJ5*02     9    T..G............A.....CC.......C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_137855

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           321     7e-90
IGHD1-26*01                                                                                           12.2    32   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTAGACCA	AGTGGG	GCTGCGGGGGAACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTAGACCAAGTGGGGCTGCGGGGGAACAACTTTGACTAC	ARHVDQVGLRGNNFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	228	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  L  G  R  Y  Y  W  G  W  L  R  Q  P  P  G  K  G 
                    Query_4746   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACCCTTGGAAGATACTATTGGGGCTGGCTCCGCCAGCCCCCCGGGAAGGGG  90
V  90.8% (228/251)  IGHV4-39*01  49   ...............................G........G.AG.A.T..T.....C.........A.............A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  H  Y  S  G  S  P  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  P 
                    Query_4746   91   CTGGAGTGGATTGCGAGTATTCATTACAGTGGGAGCCCCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCCGTAGACACGCCC  180
V  90.8% (228/251)  IGHV4-39*01  139  .............G......CT....T.........A.....................................A............T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  H  F  S  R  R  L  R  S  V  T  A  S  D  T  A  V  Y  Y  C  A  R  H  V  D  Q  V  G  L 
                    Query_4746   181  AAGAACCACTTCTCCCGGAGGCTGAGGTCTGTGACCGCCTCAGACACGGCTGTATATTACTGTGCGAGACATGTAGACCAAGTGGGGCTG  270
V  90.8% (228/251)  IGHV4-39*01  229  ........G.......T..A......C............G.............G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-26*01  6    --------------------------------------------------------------------------------......----  11

                                      GT------------------>                                  
                                       R  G  N  N  F  D  Y  W  G  Q  G  S  L  A  T  V  S  S  
                    Query_4746   271  CGGGGGAACAACTTTGACTACTGGGGCCAGGGAAGTCTGGCCACCGTCTCCTCAG  325
J  93.3% (42/45)    IGHJ4*02     4    ----------........................CC....T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_137854

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         335     4e-94
IGHD3-10*01                                                                                           21.8    0.042
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCAGTTTCTGTCTTAGTT	TGGTCCGGGGAGTT	TGTGGTGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGTTTCTGTCTTAGTTTGGTCCGGGGAGTTTGTGGTGGTTTTGATATC	ARGSFCLSLVRGVCGGFDI	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4747     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  92.8% (232/250)  IGHV4-30-2*01  49   .......................................................C...............G.....A............  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  E  I  N  Q  S  G  T  T  N  Y  K  P  S  L  K  S  R  V  T  T  S  V  D  T  S 
                    Query_4747     91   CTGGAGTGGATTGGGGAAATCAATCAAAGTGGAACCACCAACTACAAGCCGTCCCTCAAGAGTCGAGTAACCACATCAGTGGACACGTCC  180
V  92.8% (232/250)  IGHV4-30-2*01  139  ...............T.C...T....T.....G.G....T.......C....................C....T......A....G....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                         K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  F  C  L  S  L 
                    Query_4747     181  AAGAACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCAGTTTCTGTCTTAGTTTG  270
V  92.8% (232/250)  IGHV4-30-2*01  229  .........................G........................C..............C....--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD3-10*01    10   ----------------------------------------------------------------------------------------..  11

                                        3-IMGT----------------------->                               
                                         V  R  G  V  C  G  G  F  D  I  W  G  Q  G  T  M  V  T  V  S  
                    Query_4747     271  GTCCGGGGAGTTTGTGGTGGTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTT  331
D  92.9% (13/14)    IGHD3-10*01    12   ..T.........-------------------------------------------------  23
J  100.0% (41/41)   IGHJ3*02       7    --------------------.........................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_137857

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           330     1e-92
IGHD3-16*01                                                                                           10.3    115  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TATGA	CGGG	GGTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATATGACGGGGGTAAGGACGTC	TRYDGGKDV	244	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  N  N  L  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_4748   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGAGACTCCATCAGCAATAATCTTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  92.4% (230/249)  IGHV4-39*01  49   ...................C.........T.G...........G..G.AG.......................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  G  I  Y  Y  T  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4748   91   CTGGAGTGGATTGGGGGTATCTATTATACTGGGAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  92.4% (230/249)  IGHV4-39*01  139  ...............A............G.....G..........................................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                       K  N  Q  F  Y  L  E  L  S  S  V  T  A  A  D  T  A  A  Y  F  C  T  R  Y  D  G  G  K  D  V 
                    Query_4748   181  AAGAACCAGTTTTACCTGGAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGCGTATTTTTGTACGAGATATGACGGGGGTAAGGACGTC  270
V  92.4% (230/249)  IGHV4-39*01  229  ...........C.C....A.................................T.....AC...G.....---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-16*01  5    ---------------------------------------------------------------------.....----------------  9
J  97.8% (44/45)    IGHJ6*02     18   ------------------------------------------------------------------------------....T.......  29

                                                                       
                                       W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4748   271  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  303
J  97.8% (44/45)    IGHJ6*02     30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_137856

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            382     3e-108
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4749   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_4749   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  98.8% (247/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_4749   181  AGAACTCACTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  98.8% (247/250)  IGHV3-7*01   227  ..............C.......................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4749   271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_202518

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           388     5e-110
IGHD4-17*01                                                                                           16.1    2.5   
IGHJ1*01                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD4-17*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGG	ACGGTGAC	GCTCTTTTGCGAGA	TGAAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGACGGTGACGCTCTTTTGCGAGATGAATACTTCCAACAC	ARRDGDALLRDEYFQH	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	101	13	0	88.6
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	294	271	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  A  Y  S  F  T  
                    Query_4750   2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCTTGTAAAGGTTCTGCATACAGCTTTACCA  91
V  92.2% (271/294)  IGHV5-51*01  2    ..G..........................................................C.....G.......G..............  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  D  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  G  D  S  D  A  R  Y  
                    Query_4750   92   ACGACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGCATCATCTTTCCTGGTGACTCTGATGCCAGATACA  181
V  92.2% (271/294)  IGHV5-51*01  92   G.T.........G..........................................G.......A................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  H  I  T  L  S  A  D  K  S  V  S  T  V  Y  L  Q  W  R  G  L  R  P  P  D  
                    Query_4750   182  GCCCGTCCTTCCAAGGCCACATCACCCTCTCAGCCGACAAGTCCGTCAGCACCGTCTACCTGCAGTGGAGGGGCTTGAGGCCCCCCGACA  271
V  92.2% (271/294)  IGHV5-51*01  182  ...................GG.....A.................A.........C...............CA..C...A.G..T.G....  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      T  A  I  Y  Y  C  A  R  R  D  G  D  A  L  L  R  D  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  
                    Query_4750   272  CCGCCATATATTACTGTGCGAGACGGGACGGTGACGCTCTTTTGCGAGATGAATACTTCCAACACTGGGGCCAGGGAACCCTGGTCACCG  361
V  92.2% (271/294)  IGHV5-51*01  272  .......G................------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD4-17*01  6    ---------------------------........-------------------------------------------------------  13
J  96.0% (48/50)    IGHJ1*01     3    -------------------------------------------------............G..............C.............  43

                                               
                                      V  S  S  
                    Query_4750   362  TCTCCTCAG  370
J  96.0% (48/50)    IGHJ1*01     44   .........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_137852

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           43.0    2e-08
IGHJ3*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TATCACTGC	TTACTATGATAGTAGTGGTTAT	A	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATATCACTGCTTACTATGATAGTAGTGGTTATAATGCTTTTGATATC	VRDITAYYDSSGYNAFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  P  G  F  P  L  R  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4751   1    GGTCCCTGAGACTCTCCTGTGCAGCCCCTGGATTCCCCCTTAGGAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-23*01  47   ..........................T........A..T....C.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  D  S  S  V  S  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4751   91   AGTGGGTCTCAGGTATTAGTGATAGTAGTGTTAGTACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATTTCCAGAGACAATTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  ............C........G....G...G...C...T..................................C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  V  Q  M  N  R  M  R  A  E  D  T  A  V  Y  Y  C  V  R  D  I  T  A  Y  Y  D  
                    Query_4751   181  AGAACACGCTGTATGTGCAAATGAACAGAATGAGAGCCGAGGACACGGCCGTATATTACTGTGTGAGAGATATCACTGCTTACTATGATA  270
V  93.2% (233/250)  IGHV3-23*01  227  ..............C.............CC.................................C..A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (22/22)   IGHD3-22*01  4    -------------------------------------------------------------------------------...........  14

                                      IMGT--------------------->                                  
                                      S  S  G  Y  N  A  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4751   271  GTAGTGGTTATAATGCTTTTGATATCTGGGGCCAAGGGACATTGGTCACCGTCTCTTCAG  330
D  100.0% (22/22)   IGHD3-22*01  15   ...........-------------------------------------------------  25
J  97.9% (47/48)    IGHJ3*02     3    ------------.............................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_202515

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           397     8e-113
IGHD3-16*01                                                                                           27.6    9e-04 
IGHJ4*01                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCGGTGCCCCTGCTTTGGAG	TATGATAATGTTTGGGGGAG	AGTTCAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCGGTGCCCCTGCTTTGGAGTATGATAATGTTTGGGGGAGAGTTCAGTAC	ARLGAPALEYDNVWGRVQY	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_4752   1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTA  90
V  93.8% (272/290)  IGHV5-51*01  6    .........................G............................................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  L  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  Q
                    Query_4752   91   CTGGATCGGCTGGGTGCGCCAACTGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACAAGATACAGACA  180
V  93.8% (272/290)  IGHV5-51*01  96   .....................GA.......................................................C........C.C  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  S  S  I  R  T  T  F  L  Q  W  N  S  L  Q  S  S  D  T  A
                    Query_4752   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGCTCCATCAGAACCACCTTCCTGCAGTGGAATAGTCTGCAGTCCTCGGACACCGC  270
V  93.8% (272/290)  IGHV5-51*01  186  ...................................AG........C...G...A...........GC..C...A..G.............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  L  G  A  P  A  L  E  Y  D  N  V  W  G  R  V  Q  Y  W  G  Q  G  T  L  V
                    Query_4752   271  CATGTATTATTGTGCGAGACTCGGTGCCCCTGCTTTGGAGTATGATAATGTTTGGGGGAGAGTTCAGTACTGGGGCCAAGGAACCCTGGT  360
V  93.8% (272/290)  IGHV5-51*01  276  .........C..........----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  90.0% (18/20)    IGHD3-16*01  5    ----------------------------------------......T.C...........------------------------------  24
J  97.3% (36/37)    IGHJ4*01     12   -------------------------------------------------------------------.......................  34

                                                    
                                        A  V  S  S  
                    Query_4752   361  CGCCGTCTCCTCAG  374
J  97.3% (36/37)    IGHJ4*01     35   .A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_202514

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            347     7e-98
IGHD1-26*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTGT	TGGGAGCAACT	TTTTTCGAGGACCGGGCAACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTGTTGGGAGCAACTTTTTTCGAGGACCGGGCAACCCCTTTGACTAC	ARDRVGSNFFRGPGNPFDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  N  F  N  N  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4753   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCAACTTTAATAACTATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-7*03   47   ....................G...............C.....G..G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  K  H  Y  V  D  S  V  K  G  R  F  I  I  S  R  D  S  A  
                    Query_4753   91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGAGAAACACTATGTGGACTCTGTGAAGGGCCGATTCATCATCTCCAGAGACAGCGCCA  180
V  94.4% (236/250)  IGHV3-7*03   137  ....................C.................T..............................C..............A.....  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  G  L  R  D  E  D  T  A  V  Y  Y  C  A  R  D  R  V  G  S  N  F  
                    Query_4753   181  AGAACTCACTGTATCTGCAAATGAATGGCCTGAGAGACGAGGACACGGCCGTTTATTATTGTGCGAGAGATCGTGTTGGGAGCAACTTTT  270
V  94.4% (236/250)  IGHV3-7*03   227  .........................CA.........C...............G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD1-26*01  8    ----------------------------------------------------------------------------.......T...---  18

                                      -IMGT----------------------->                                  
                                      F  R  G  P  G  N  P  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_4753   271  TTCGAGGACCGGGCAACCCCTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  333
J  97.7% (43/44)    IGHJ4*02     5    -------------------......................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_202517

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           422     2e-120
IGHD3-22*01                                                                                           23.8    0.012 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATACTTTTGATATC	ARVSREYYDTTGRDTFDI	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F
                    Query_4754   1    GCAGCTGGTGCAGTCTGGAGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTT  90
V  96.6% (280/290)  IGHV3-33*01  6    ..........G.......G..................................................................AG..A  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D
                    Query_4754   91   TGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGA  180
V  96.6% (280/290)  IGHV3-33*01  96   ..........................................................................................  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A
                    Query_4754   181  CTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGC  270
V  96.6% (280/290)  IGHV3-33*01  186  .....................................T...........C.......................A................  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  G  A  R  V  S  R  E  Y  Y  D  T  T  G  R  D  T  F  D  I  W  G  Q  G  T  I  L  T
                    Query_4754   271  TGTATATTACGGTGCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATACTTTTGATATCTGGGGCCAAGGGACAATACTCAC  360
V  96.6% (280/290)  IGHV3-33*01  276  ...G......T.........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  88.9% (16/18)    IGHD3-22*01  5    -------------------------------..........G..G....-----------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ---------------------------------------------------....G............................GG....  39

                                                 
                                        V  S  S  
                    Query_4754   361  CGTCTCTTCAG  371
J  94.0% (47/50)    IGHJ3*02     40   ...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_202516

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           297     7e-83
IGHD3-3*01                                                                                            10.3    120  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGACACAG	TTTTT	AGTTTCCAC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACACAGTTTTTAGTTTCCACTTCGACCCC	ARVDTVFSFHFDP	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	100	14	0	87.7
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	252	221	31	0	87.7


Alignments

                                      <---------FR1-IMGT----------><----------CDR1-IMGT---------><--------------------FR2-IMGT--
                                         S  L  R  L  S  C  T  V  S  G  G  S  V  S  S  G  S  F  F  W  T  W  I  R  Q  P  P  G  K  
                    Query_4755   1    AGTCCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCGTCAGTAGCGGTAGTTTCTTTTGGACCTGGATCCGGCAGCCCCCAGGGAAGG  90
V  87.7% (221/252)  IGHV4-61*01  47   ..A.....TCC...A............................C..T.......A..AC....G..........................  136
                                         T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  

                                      -------------------><-----CDR2-IMGT-----><------------------------------------------------
                                      G  L  E  W  L  A  Y  I  S  Y  S  G  R  T  K  S  N  P  S  L  K  S  R  V  T  M  S  I  D  T  
                    Query_4755   91   GACTGGAATGGCTTGCCTATATCTCTTACAGTGGGAGAACCAAGTCTAATCCCTCTCTCAAGAGTCGAGTCACCATGTCAATAGACACGT  180
V  87.7% (221/252)  IGHV4-61*01  137  .......G...A...GG.......A............C.....C.AC..C.....C....................A...G.........  226
                                      G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  

                                      ----FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT-
                                      S  K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  V  D  T  V  F  S  
                    Query_4755   181  CCAAGAACCAATTCTCCCTGAGGCTGACTTCCGTGACCGCTGCGGACACGGCCGTTTATTTCTGTGCGAGAGTGGACACAGTTTTTAGTT  270
V  87.7% (221/252)  IGHV4-61*01  227  ..........G..........A.....GC..T.......................G....A...........------------------  298
                                      S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                    
D  100.0% (5/5)     IGHD3-3*01   10   ---------------------------------------------------------------------------------.....----  14

                                      ------------->                                  
                                      F  H  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4755   271  TCCACTTCGACCCCTGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  318
J  97.7% (42/43)    IGHJ5*02     9    -----.......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_202511

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           357     1e-100
IGHD5-18*01                                                                                           12.2    32    
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAACGCCGGGTC	GGTTAC	AAATCCG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAACGCCGGGTCGGTTACAAATCCGACGGTATGAATGTC	ARDKRRVGYKSDGMNV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4756   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACTTTCAGAAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-33*01  47   .....................................C.....T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  S  D  G  S  D  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4756   91   AGTGGGTGGCAGTTATTTGGTCTGATGGAAGTGATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATAGTA  180
V  95.6% (239/250)  IGHV3-33*01  137  ................A....A..........A.....................................................TCC.  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  V  Y  F  C  A  R  D  K  R  R  V  G  Y  
                    Query_4756   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGAACCGAGGACACGGCTGTGTATTTCTGTGCGAGAGATAAACGCCGGGTCGGTTACA  270
V  95.6% (239/250)  IGHV3-33*01  227  ........C..........................G.....................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD5-18*01  15   -----------------------------------------------------------------------------------......-  20

                                      T------------------>                                 
                                      K  S  D  G  M  N  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4756   271  AATCCGACGGTATGAATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  95.7% (45/47)    IGHJ6*02     16   ------........G.C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_202510

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           308     4e-86
IGHD4-4*01                                                                                            19.9    0.15 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATCAGC	CAGTAACTAC	GCTCGG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCAGCCAGTAACTACGCTCGGCTAC	ARNQPVTTLGY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	245	221	24	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  T  V  S  N  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4757   1    GGTCTCTGAGACTCTCCTGTGCAGCCTCTGGGGTCACCGTCAGTAACAACTATATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.2% (221/245)  IGHV3-53*01  47   ....C...........................T............G......C....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  L  S  V  M  Y  S  R  G  A  T  G  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  S  S  K  
                    Query_4757   91   AGTGGCTCTCAGTCATGTATAGTCGTGGAGCCACAGGGTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  90.2% (221/245)  IGHV3-53*01  137  .....G.......T..T.....CG....TAG....TAC................A..........................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      N  T  V  Y  L  Q  M  K  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  N  Q  P  V  T  T  L  G  
                    Query_4757   181  ACACGGTGTATCTTCAAATGAAAAACCTGAGAGTCGAGGACACGGCCGTCTATTACTGTGCGAGAAATCAGCCAGTAACTACGCTCGGCT  270
V  90.2% (221/245)  IGHV3-53*01  227  .....C................C.G........C...............G...............-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (10/10)   IGHD4-4*01   7    ------------------------------------------------------------------------..........--------  16
J  94.7% (36/38)    IGHJ4*02     11   ----------------------------------------------------------------------------------------..  12

                                      ->                                  
                                      Y  G  G  P  G  T  L  V  T  V  S  S  
                    Query_4757   271  ACGGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  306
J  94.7% (36/38)    IGHJ4*02     13   ..T......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_202513

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            327     8e-92
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TGGCCGGCG	GTGGCTGG	CT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGCCGGCGGTGGCTGGCTCTTTGACTAT	VAGGGWLFDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  Q  F  T  S  S  T  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4758   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTCAATTCACCTCTAGTACCTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.0% (226/243)  IGHV3-7*03   47   .....................C.......GG........T.....G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  Q  D  G  S  E  K  I  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4758   91   AGTGGGTGGCCAACATAAACCAAGACGGAAGTGAGAAAATCTACGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.0% (226/243)  IGHV3-7*03   137  ...................G.....T............TA...T..............................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  A  D  G  T  A  V  Y  Y  C  V  A  G  G  G  W  L  F  D  
                    Query_4758   181  AGAAGTCACTGTATTTACAAATGAACAGCCTGAGAGCCGACGGCACGGCCGTGTATTATTGTGTGGCCGGCGGTGGCTGGCTCTTTGACT  270
V  93.0% (226/243)  IGHV3-7*03   227  ....C.........C.G.......................G.A...............C....---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (8/8)     IGHD6-19*01  11   ------------------------------------------------------------------------........----------  18
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------........  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4758   271  ATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.7% (43/44)    IGHJ4*02     13   .C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_233200

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_4759   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AGT.A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S 
                    Query_4759   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T.A....A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_4759   181  CAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ..............G.....C..................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4759   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_233205

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           353     1e-99
IGHD3-3*01                                                                                            16.1    2.5  
IGHJ5*01                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGATGGGGAAGGG	ACGATTTT	CGGGAAGGGGTGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGATGGGGAAGGGACGATTTTCGGGAAGGGGTGAGGTTCGACTCT	ARGRWGRDDFREGVRFDS	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	258	32	0	89


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  A  G  S  G  F  S  L  T  Y  Y
                    Query_4760   1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGGTGCAGCCTGGAGGGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCAGCCTCACATACTA  90
V  89.0% (258/290)  IGHV3-48*03  6    ..........G.......G...........A..................................C...........C.T...GTAGT..  95
                                        Q  L  V  E  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        E  I  N  W  V  R  Q  A  S  G  K  G  L  E  W  I  S  Y  I  S  T  S  G  S  T  R  H  Y  A  D
                    Query_4760   91   TGAAATCAACTGGGTCCGCCAGGCTTCAGGGAAGGGGCTGGAATGGATTTCATACATCAGTACTAGTGGCAGTACCAGACATTACGCAGA  180
V  89.0% (258/290)  IGHV3-48*03  96   ......G..................C................G...G..........T....G......T.......T.T.C........  185
                                        E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  M  R  G  R  L  T  I  S  R  D  N  A  R  N  S  V  Y  L  Q  M  D  S  L  R  V  D  D  S  A
                    Query_4760   181  CTCTATGAGGGGCCGACTCACCATCTCCAGAGACAACGCCAGGAACTCAGTGTATCTACAAATGGACAGCCTCAGAGTCGACGACTCGGC  270
V  89.0% (258/290)  IGHV3-48*03  186  ....G...A.......T........................A.......C.......G......A.......G....C...G...A....  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  G  R  W  G  R  D  D  F  R  E  G  V  R  F  D  S  W  G  Q  G  V  L  V  T
                    Query_4760   271  TGTTTATTACTGTGCGAGAGGCCGATGGGGAAGGGACGATTTTCGGGAAGGGGTGAGGTTCGACTCTTGGGGCCAGGGAGTCCTGGTCAC  360
V  89.0% (258/290)  IGHV3-48*03  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-3*01   6    -----------------------------------........-----------------------------------------------  13
J  91.1% (41/45)    IGHJ5*01     7    --------------------------------------------------------..........C........A...AC.........  40

                                                 
                                        V  S  S  
                    Query_4760   361  CGTCTCCTCAG  371
J  91.1% (41/45)    IGHJ5*01     41   ...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_233204

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           316     2e-88
IGHD6-13*01                                                                                           12.2    31   
IGHJ2*01                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD6-13*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTGGCCCAGTTT	CTGGTA	ATCAAGAAC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGGCCCAGTTTCTGGTAATCAAGAACACTTCGATCTC	ATGPVSGNQEHFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	224	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  L  D  F  N  D  H  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_4761   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGACTCGACTTCAATGACCACTATATGAGTTGGATCCGCCAGGCTCCAGGTAAGGGGCTGG  90
V  91.1% (224/246)  IGHV3-11*06  47   ........................C.......T..AC.....G....T....C.....C....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  A  Y  L  S  S  S  D  T  Y  T  N  Y  A  D  S  V  M  G  R  F  S  I  S  R  D  H  A  
                    Query_4761   91   AGTGGATTGCATATCTTAGTAGTAGTGACACTTACACAAACTACGCAGACTCTGTGATGGGCCGATTCAGCATCTCCAGAGACCACGCCA  180
V  91.1% (224/246)  IGHV3-11*06  137  .....G..T....CA...........AGT.G..........................A...........C.............A......  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  T  G  P  V  S  G  N  Q  
                    Query_4761   181  AGAAGTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTGTATTACTGTGCGACTGGCCCAGTTTCTGGTAATCAAG  270
V  91.1% (224/246)  IGHV3-11*06  227  ....C...................................G.........................------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD6-13*01  15   ------------------------------------------------------------------------------......------  20

                                      ------------->                                
                                      E  H  F  D  L  W  G  R  G  T  L  V  T  V  S  S
                    Query_4761   271  AACACTTCGATCTCTGGGGCCGTGGAACCCTGGTCACTGTCTCCTC  316
J  97.7% (42/43)    IGHJ2*01     9    ---......................C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_233207

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           375     3e-106
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4762   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGCGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.0% (245/250)  IGHV4-31*03  49   ...............................................T.G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_4762   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.0% (245/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_4762   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.0% (245/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4762   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_233206

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	44	6	0	88
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	241	27	6	88


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_4763   1    CAGGATTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.0% (241/274)  IGHV4-34*01  26   .....C..T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_4763   91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.0% (241/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_4763   181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.0% (241/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_4763   271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.0% (241/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_233209

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           369     2e-104
IGHD1-20*01                                                                                           14.1    9.3   
IGHJ6*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGAATACAA	GTATAAC	GGAATAGGG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGAATACAAGTATAACGGAATAGGGATGGACGTC	TRSEYKYNGIGMDV	281	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	166	21	19	2	0	90.5
FR3-IMGT	167	280	114	102	12	0	89.5
CDR3-IMGT (germline)	281	286	6	5	1	0	83.3
Total	N/A	N/A	286	261	25	0	91.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  E  S  R  N
                    Query_4764   1    GCAGCTGGTGCAGTCTGGAGGAGGCCTGATCCAGCCGGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCGGGGTTCACCGAAAGTAGGAA  90
V  91.3% (261/286)  IGHV3-53*01  6    ..........G..............T..........T................................T..........TC.....C..  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  T  T  H  Y  A  D  S
                    Query_4764   91   TTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGGAGTGGGTCTCAGTTATTTATAGTGGTGGTACCACACACTACGCAGATTC  180
V  91.3% (261/286)  IGHV3-53*01  96   C.......G...........................G..........................C.......G....T..........C..  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  N  S  M  T  T  L  F  L  Q  M  N  S  L  R  A  E  D  S  A  V
                    Query_4764   181  TGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCATGACCACATTGTTTCTTCAAATGAACAGTTTGAGAGCCGAGGACTCGGCCGT  270
V  91.3% (261/286)  IGHV3-53*01  186  C...........A.........................A..A...GC...A...............CC..............A.......  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><----------------CDR3-IMGT--------------->                                 
                                        Y  Y  C  T  R  S  E  Y  K  Y  N  G  I  G  M  D  V  W  G  Q  G  T  P  V  P  V  S  S 
                    Query_4764   271  GTATTACTGTACGAGATCAGAATACAAGTATAACGGAATAGGGATGGACGTCTGGGGCCAAGGGACCCCGGTCCCCGTCTCCTCA  355
V  91.3% (261/286)  IGHV3-53*01  276  ..........G.....---------------------------------------------------------------------  291
                                        Y  Y  C  A  R                                                                      
D  100.0% (7/7)     IGHD1-20*01  2    ---------------------------.......---------------------------------------------------  8
J  95.2% (40/42)    IGHJ6*02     21   -------------------------------------------........................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_233208

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            391     6e-111
IGHD3-16*02                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TA	ATTACGTTTGGGGGAGTTATCG	CCCCGAGTACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAATTACGTTTGGGGGAGTTATCGCCCCGAGTACAACTTTGACTAC	ARDNYVWGSYRPEYNFDY	288	341	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	71	4	0	94.7
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	173	24	17	4	3	70.8
FR3-IMGT	174	287	114	108	6	0	94.7
CDR3-IMGT (germline)	288	295	8	8	0	0	100
Total	N/A	N/A	296	275	18	3	92.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  T  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_4765   3    CAGATGCAGCTGGTGCAGTCTGGGACTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACT  92
V  92.9% (275/296)  IGHV1-3*01   1    ...G.C.....T............G.................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  A  M  Q  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  S  V     M  N  T  R  Y 
                    Query_4765   93   AATTATGCTATGCAATGGGTGCGCCAGGCCCCCGGACAAAGACTTGAGTGGATGGGATGGATCAACTCTGTCA---TGAACACAAGATAT  179
V  92.9% (275/296)  IGHV1-3*01   91   .GC...........T..........................G........................G...G..ATGGT.......A....  180
                                       S  Y  A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  Q  K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  I  N  S  L  T  S  E  D 
                    Query_4765   180  TCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGATTAACAGCCTGACATCTGAAGAC  269
V  92.9% (275/296)  IGHV1-3*01   181  ..................................................................C.G.G........G..........  270
                                       S  Q  K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  R  D  N  Y  V  W  G  S  Y  R  P  E  Y  N  F  D  Y  W  G  Q  G  T  L 
                    Query_4765   270  ACGGCTGTTTATTACTGTGCGAGAGATAATTACGTTTGGGGGAGTTATCGCCCCGAGTACAACTTTGACTACTGGGGCCAGGGAACCCTG  359
V  92.9% (275/296)  IGHV1-3*01   271  ........G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (22/22)   IGHD3-16*02  9    ----------------------------......................----------------------------------------  30
J  100.0% (45/45)   IGHJ4*02     4    -------------------------------------------------------------.............................  32

                                                      
                                       V  T  V  S  S  
                    Query_4765   360  GTCACCGTCTCCTCAG  375
J  100.0% (45/45)   IGHJ4*02     33   ................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_47655

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           350     9e-99
IGHD3-16*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCC	ATGATCGCGTCTGGGGGAG	GCATCGAGAGGTCTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATATCCATGATCGCGTCTGGGGGAGGCATCGAGAGGTCTCCTACGGTATGGACGTC	AKDIHDRVWGRHREVSYGMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  I  Y  G  M  H  W  A  R  Q  A  P  G  K  G  L  
                    Query_4766   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAATATCTATGGCATGCACTGGGCCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-30*18  47   .....................................C....G..G.................T..........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  E  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4766   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTAATGAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (237/250)  IGHV3-30*18  137  ...................................A.................................................TT...  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  S  V  H  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  I  H  D  R  V  W  
                    Query_4766   181  AAAACTCGGTGCATCTGGAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTTTATTACTGTGCGAAAGATATCCATGATCGCGTCTGGG  270
V  94.8% (237/250)  IGHV3-30*18  227  .G...A..C..T.....C..................................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  84.2% (16/19)    IGHD3-16*01  6    ---------------------------------------------------------------------------.....TA...T....  20

                                      DR3-IMGT-------------------------->                              
                                      G  R  H  R  E  V  S  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_4766   271  GGAGGCATCGAGAGGTCTCCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  335
D  84.2% (16/19)    IGHD3-16*01  21   ....-------------------------------------------------------------  24
J  100.0% (46/46)   IGHJ6*02     14   -------------------..............................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_167029

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            310     1e-86
IGHD6-6*01                                                                                            12.2    32   
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CAAG	TCGTCC	GAAATCGACA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACAAGTCGTCCGAAATCGACAACTTCTACGGTTTGGACGTC	AKDKSSEIDNFYGLDV	237	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	20	4	0	83.3
FR3-IMGT	123	236	114	107	7	0	93.9
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	232	215	17	0	92.7


Alignments

                                     <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                        A  A  F  G  F  T  F  E  D  Y  A  M  H  W  V  R  Q  G  P  G  K  G  L  E  W  V  S  G  I  
                    Query_4767  13   GTGCAGCCTTTGGATTCACGTTTGAAGATTATGCCATGCACTGGGTCCGGCAAGGTCCAGGGAAGGGCCTGGAATGGGTCTCAGGAATTA  102
V  92.7% (215/232)  IGHV3-9*01  65   .........C.........C.....T............................C..................G...........T....  154
                                        A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  

                                     ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                     S  W  N  G  Y  T  I  A  Y  A  D  S  V  K  G  R  F  T  L  S  R  D  N  A  R  N  S  L  Y  L  
                    Query_4767  103  GTTGGAATGGTTATACCATAGCCTATGCGGACTCTGTGAAGGGCCGATTCACCCTCTCCAGAGACAACGCCAGGAACTCCCTGTATCTGC  192
V  92.7% (215/232)  IGHV3-9*01  155  ........A..GG..G.....G...............................A..................A.................  244
                                     S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                     -------------------------------------------><-------------------CDR3-IMGT-----------------
                                     Q  M  N  S  L  G  A  D  D  T  A  F  Y  Y  C  A  K  D  K  S  S  E  I  D  N  F  Y  G  L  D  
                    Query_4767  193  AAATGAACAGTCTGGGAGCTGACGACACGGCCTTCTATTATTGTGCAAAAGACAAGTCGTCCGAAATCGACAACTTCTACGGTTTGGACG  282
V  92.7% (215/232)  IGHV3-9*01  245  ..............A.......G...........G.....C...........--------------------------------------  296
                                     Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                                         
D  100.0% (6/6)     IGHD6-6*01  13   --------------------------------------------------------......----------------------------  18
J  96.2% (51/53)    IGHJ6*02    10   ------------------------------------------------------------------------...A.......A......  27

                                     ->                                 
                                     V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4767  283  TCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  96.2% (51/53)    IGHJ6*02    28   ...................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_166199

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHJ6*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGATGGCCGGACCAAGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATGGCCGGACCAAGGACGGTATGGCCGTC	VRQSSDGRTKDGMAV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  S  Y
                    Query_4768   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGCAAGGGTTCTGGATACGACTTTACCAGCTA  90
V  93.1% (271/291)  IGHV5-51*01  6    ....................................C.......................T...............AG............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  T  G  L  E  W  M  G  I  I  I  P  D  D  S  E  T  R  Y  S  P
                    Query_4768   91   CTGGATCGGCTGGGTGCGCCAGATGCCTGGGACAGGCCTGGAGTGGATGGGGATCATCATTCCGGATGACTCTGAGACCAGATACAGCCC  180
V  93.1% (271/291)  IGHV5-51*01  96   ...........................C....A.........................TA...T.G.........T..............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  R  S  S  L  R  A  A  D  T  A
                    Query_4768   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGCGGAGTAGCCTGAGGGCCGCGGACACCGC  270
V  93.1% (271/291)  IGHV5-51*01  186  ............................................G................T....C.......A....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                           
                                        R  C  Y  C  V  R  Q  S  S  D  G  R  T  K  D  G  M  A  V  W  G  Q  G  T  A  V  T  V 
                    Query_4768   271  CAGGTGTTATTGTGTGAGACAATCAAGCGATGGCCGGACCAAGGACGGTATGGCCGTCTGGGGCCAAGGGACCGCGGTCACCGTC  355
V  93.1% (271/291)  IGHV5-51*01  276  ..T..A...C....C......----------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                   
J  95.1% (39/41)    IGHJ6*02     16   --------------------------------------------.........A...................A...........  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_82778

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           325     3e-91
IGHD1-1*01                                                                                            14.1    8.7  
IGHJ3*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCACA	ACT	TACAGCTGGA	CCTTGGATGGTGTCA	ATGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAACTTACAGCTGGACCTTGGATGGTGTCAATGTTTTTGATCTC	ATTYSWTLDGVNVFDL	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	102	12	0	89.5
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	231	23	0	90.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  A  W  M  T  W  V  R  Q  A  P  E  K  G  L  
                    Query_4769   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGGGCCTGGATGACCTGGGTCCGCCAGGCTCCAGAGAAGGGGCTGG  90
V  90.9% (231/254)  IGHV3-15*01  47   .......T.....................................AC..........G....................G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  T  T  T  E  G  G  T  T  E  Y  S  T  P  V  R  G  R  F  T  M  S  R  D  
                    Query_4769   91   AGTGGGTTGGCCGTATTAAAACCACCACCGAAGGTGGGACAACAGAATACTCTACACCCGTGAGAGGCAGATTCACCATGTCAAGAGACG  180
V  90.9% (231/254)  IGHV3-15*01  137  .....................G..AA..T..T..............C...G..G.........A...............C........T.  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  K  N  T  L  F  L  Q  I  N  S  L  K  T  E  D  T  A  I  Y  Y  C  A  T  T  Y  S  W  T  
                    Query_4769   181  ATTCAAAAAACACACTGTTTCTTCAAATAAACAGCCTGAAAACCGAGGACACAGCCATATATTACTGTGCCACAACTTACAGCTGGACCT  270
V  90.9% (231/254)  IGHV3-15*01  227  .............G....A...G.....G...........................G.G.........A.....----------------  300
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  90.0% (9/10)     IGHD1-1*01   3    -----------------------------------------------------------------------------....A.....---  12

                                      R3-IMGT------------------>                                  
                                      L  D  G  V  N  V  F  D  L  W  G  Q  G  T  K  V  T  V  S  S  
                    Query_4769   271  TGGATGGTGTCAATGTTTTTGATCTCTGGGGCCAAGGGACAAAGGTCACCGTCTCTTCAG  330
J  93.8% (45/48)    IGHJ3*01     3    ------------...C.......G..................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_286670

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           382     4e-108
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	267	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  H
                    Query_4770   1    GCAGCTAGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATCA  90
V  92.1% (267/290)  IGHV5-51*01  6    ......G.............C........A.....................G.........A......C.........C.......GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  P
                    Query_4770   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCCC  180
V  92.1% (267/290)  IGHV5-51*01  96   ...................................................G.......A.....G.......G....C.....C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  A
                    Query_4770   181  GTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCGC  270
V  92.1% (267/290)  IGHV5-51*01  186  ...............G........C...................................G.......G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_4770   271  CTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  350
V  92.1% (267/290)  IGHV5-51*01  276  .A.......C.....G....------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    -----------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_286671

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGGTTT	TAGTAGTGCTTATTACT	GGCTTAAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGTTTTAGTAGTGCTTATTACTGGCTTAATTACTTTGACTGC	AKGFSSAYYWLNYFDC	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4771   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAATTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-23*01  47   ..........................................G..GC..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  S  A  G  T  N  T  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_4771   91   AGTGGGTCTCAGGTATTAGTAGTGCTGGTACTAACACATACTACGCAGACTCCGTGCAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.9% (232/247)  IGHV3-23*01  137  ............C.......G..AG....GG..G......................A.................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  G  F  S  S  A  Y  Y  
                    Query_4771   181  AGAACACGCTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTTCTGTGCGAAGGGTTTTAGTAGTGCTTATTACT  270
V  93.9% (232/247)  IGHV3-23*01  227  ............A.......................................A....A.........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.1% (16/17)    IGHD3-22*01  13   -------------------------------------------------------------------------........G........  29

                                      T------------------>                                  
                                      W  L  N  Y  F  D  C  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_4771   271  GGCTTAATTACTTTGACTGCTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  324
J  95.7% (44/46)    IGHJ4*02     3    --------..........A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_286672

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD5-18*01                                                                                           18.0    0.58 
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCAT	GTGGATACA	ATTCCGT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCATGTGGATACAATTCCGTTACTACGGAATGGACGTC	ARGMWIQFRYYGMDV	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	227	14	0	94.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_4772   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCATCAGTAGTTATTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  94.2% (227/241)  IGHV4-59*01  50   .....TCC...A....C.............G...............C..C........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  F  Y  S  G  T  S  I  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N  
                    Query_4772   94   GGATTGGGTATATCTTTTACAGTGGGACCTCCATCTACAACCCCTCACTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAACC  183
V  94.2% (227/241)  IGHV4-59*01  140  ...............A...........G.A...A............C........................G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  M  W  I  Q  F  R  Y  Y  
                    Query_4772   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGGGCATGTGGATACAATTCCGTTACTACG  273
V  94.2% (227/241)  IGHV4-59*01  230  .............................................................-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (9/9)     IGHD5-18*01  1    -------------------------------------------------------------------.........--------------  9
J  96.1% (49/51)    IGHJ6*02     12   -----------------------------------------------------------------------------------.......  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_4772   274  GAATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  317
J  96.1% (49/51)    IGHJ6*02     19   .T..............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_286673

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         339     2e-95
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	N/A	N/A	TCACCTGCCAACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGATCACCTGCCAACCCCTACTACCACGCTCTGGACGTC	ARSPANPYYHALDV	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  V  Y  I  S  N  G  G  Y  S  W  T  W  I  R  Q  P  P  G  R  G 
                    Query_4773     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTACATCAGCAATGGTGGTTACTCCTGGACCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  93.6% (233/249)  IGHV4-30-2*01  49   ..................G............G..C........G.................G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Q  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  R  S 
                    Query_4773     91   CTGGAGTGGATTGGGTACATCTATCAAAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGCGTCACCATATCGGTAGACAGGTCC  180
V  93.6% (233/249)  IGHV4-30-2*01  139  ..........................T...............................A......A...........A............  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  V  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  A  N  P  Y  Y 
                    Query_4773     181  AAGAACCAGTTCTCCGTTAACTTGAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGATCACCTGCCAACCCCTACTAC  270
V  93.6% (233/249)  IGHV4-30-2*01  229  ...............C.G..GC....C..........................G...............---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  92.7% (51/55)    IGHJ6*02       8    -----------------------------------------------------------------------------------.......  14

                                        -------------->                                 
                                         H  A  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4773     271  CACGCTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  318
J  92.7% (51/55)    IGHJ6*02       15   T...G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_286674

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4774   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4774   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_4774   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4774   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_286675

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q 
                    Query_4775   1    ACCCTGTCCCTCACCTGCACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAA  90
V  91.0% (223/245)  IGHV4-59*01  49   ....................T..........................C........C............C.................G.G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_4775   91   TGGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAAC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A....G.....C...T....T....G......C..............C...........C.C.........A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E 
                    Query_4775   181  CAGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAG  270
V  91.0% (223/245)  IGHV4-59*01  229  ...T.........AG..G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  1    -----------------------------------------------------------------------------............-  12

                                      -------------->                                  
                                       D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4775   271  GATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  319
J  92.5% (37/40)    IGHJ4*02     9    ---------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_286676

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         316     2e-88
IGHD2-15*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTCTTG	GCTACTC	TTCCTGGAGT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCTTGGCTACTCTTCCTGGAGTCTACGGTATGGACGTC	ARVLATLPGVYGMDV	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	102	12	0	89.5
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	224	22	0	91.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  V  V  S  G  Y  S  I  S  S  G  S  F  W  A  W  I  R  Q  T  P  G  K  G  L 
                    Query_4776     1    ACCCTGTCCCTCACCTGCGTAGTCTCTGGTTACTCCATCAGCAGTGGTTCCTTCTGGGCCTGGATCCGGCAGACCCCAGGGAAGGGGCTG  90
V  91.1% (224/246)  IGHV4-38-2*01  49   ...................CT............................A..A.....G.............C.................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  V  S  H  S  G  N  S  Y  Y  N  P  S  L  R  S  R  V  T  L  Q  V  D  T  S  K 
                    Query_4776     91   GAGTGGATTGGGAGTGTCTCTCATAGTGGGAACTCCTACTACAATCCGTCCCTCAGGAGTCGAGTCACCCTACAAGTAGACACGTCCAAA  180
V  91.1% (224/246)  IGHV4-38-2*01  139  ...............A...A...........G.A..........C..........A.............A..TC...............G  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                         N  H  F  S  L  S  L  S  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  V  L  A  T  L  P  G  V 
                    Query_4776     181  AACCACTTCTCCCTGAGCCTGAGTTCTGTGACCGCCGCAGACACGGCCGTTTTTTACTGTGCGAGAGTCTTGGCTACTCTTCCTGGAGTC  270
V  91.1% (224/246)  IGHV4-38-2*01  229  .....G..........AG.....C..........................G.A.............------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD2-15*01    24   ------------------------------------------------------------------------.......-----------  30
J  100.0% (49/49)   IGHJ6*02       14   -----------------------------------------------------------------------------------------.  14

                                        -------------->                                 
                                         Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4776     271  TACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  100.0% (49/49)   IGHJ6*02       15   ................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_286677

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           282     3e-78
IGHD3-16*01                                                                                           12.2    30   
IGHJ1*01                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-16*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GTC	ATTATG	GAGCCTCA	CAGCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGGTCATTATGGAGCCTCACAGCAC	TRGHYGASQH	237	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	42	9	0	82.4
CDR2-IMGT	99	122	24	16	8	0	66.7
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	243	7	6	1	0	85.7
Total	N/A	N/A	232	206	26	0	88.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  T  T  Y  G  F  H  W  V  R  Q  A  P  G  G  G  L  M  W  V  S  L  I 
                    Query_4777   12   TGTGCAGCCTCTGGATTCACCTTCACTACCTACGGGTTCCACTGGGTCCGCCAAGCTCCAGGGGGAGGACTAATGTGGGTCTCACTTATT  101
V  88.8% (206/232)  IGHV3-74*01  64   .........................G..G....T..A.G........................AAG..G..GG............G....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       D  E  D  G  S  G  A  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  K  N  T  L  Y  L 
                    Query_4777   102  GATGAAGATGGCAGCGGCGCAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAACACACTGTATCTG  191
V  88.8% (206/232)  IGHV3-74*01  154  A..AGT.....G..TA..A...G...........................................A.............G.........  243
                                       N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 

                                      --------------------------------------------><----------CDR3-IMGT--------->               
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  G  H  Y  G  A  S  Q  H  W  G  Q  G  T 
                    Query_4777   192  CAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTATTGTACAAGAGGTCATTATGGAGCCTCACAGCACTGGGGCCAGGGCACT  281
V  88.8% (206/232)  IGHV3-74*01  244  ...................................G.....C...G......--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (6/6)     IGHD3-16*01  3    -------------------------------------------------------......-----------------------------  8
J  90.0% (36/40)    IGHJ1*01     13   ---------------------------------------------------------------------....................C  33

                                                         
                                       M  V  S  V  S  S  
                    Query_4777   282  ATGGTCTCCGTCTCGTCAG  300
J  90.0% (36/40)    IGHJ1*01     34   C.....A.......C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_167028

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	279	14	0	95.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  
                    Query_4778   2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCA  91
V  95.2% (279/293)  IGHV5-51*03  2    ....G.....G......................................................................G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  
                    Query_4778   92   GCTACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACA  181
V  95.2% (279/293)  IGHV5-51*03  92   ............G.......................A...................................A....G.....A......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  
                    Query_4778   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACA  271
V  95.2% (279/293)  IGHV5-51*03  182  .................................................C...........G...............A.....T......  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_4778   272  CCGCCGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  361
V  95.2% (279/293)  IGHV5-51*03  272  .....A.G...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD6-19*01  5    --------------------------............----------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_4778   362  CCTCAG  367
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_325261

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           396     2e-112
IGHD1-1*01                                                                                            12.2    37    
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	GGATTTTGTCATAGGAC	CAACTG	TCCGGGTGCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGGATTTTGTCATAGGACCAACTGTCCGGGTGCGTGCTTTTGATATC	ARQDFVIGPTVRVRAFDI	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  I  F  T  N  Y
                    Query_4779   1    GCAGCTGGTGCAGTCTGGAGCAGAACTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACATCTTCACCAACTA  90
V  93.5% (272/291)  IGHV5-51*01  6    ........................GG.......................................G...........G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  L  G  W  V  R  Q  M  P  G  G  G  L  E  W  M  G  I  I  Y  P  R  D  S  D  T  R  Y  S  P
                    Query_4779   91   CTGGCTTGGCTGGGTGCGCCAGATGCCCGGGGGAGGCCTGGAATGGATGGGGATCATCTATCCTCGTGACTCTGATACCAGATACAGTCC  180
V  93.5% (272/291)  IGHV5-51*01  96   ....A.C........................AA.........G.....................G......................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  I  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  D  S  L  K  A  S  D  S  A
                    Query_4779   181  GTCATTCCAAGGCCAGATCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGGACAGCCTGAAGGCCTCGGACAGCGC  270
V  93.5% (272/291)  IGHV5-51*01  186  ...C............G...........................G...................AG....................C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  Q  D  F  V  I  G  P  T  V  R  V  R  A  F  D  I  W  G  Q  G  T  V  V  T
                    Query_4779   271  CATGTATTACTGTGCGAGACAGGATTTTGTCATAGGACCAACTGTCCGGGTGCGTGCTTTTGATATCTGGGGCCAAGGGACAGTGGTGAC  360
V  93.5% (272/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD1-1*01   5    --------------------------------------......----------------------------------------------  10
J  95.7% (45/47)    IGHJ3*02     4    ------------------------------------------------------............................A....C..  39

                                                 
                                        V  S  S  
                    Query_4779   361  CGTCTCTTCAG  371
J  95.7% (45/47)    IGHJ3*02     40   ...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_316450

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           288     5e-80
IGHD7-27*01                                                                                           18.0    0.59 
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCGACTTGAAC	AACTGGGGA	TGGGCAGGGGAGGGTGTTTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCGACTTGAACAACTGGGGATGGGCAGGGGAGGGTGTTTATGATGTC	ATDLNNWGWAGEGVYDV	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	243	4	4	0	0	100
Total	N/A	N/A	240	212	28	0	88.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  A  S  I  S  R  Y  Y  W  N  W  I  R  Q  P  P  G  K  A  M  E  
                    Query_4780   4    CCCTGAGACTCTCCTGTAGTGTCTCTGGTGCCTCCATCAGTCGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGCAATGGAGT  93
V  88.3% (212/240)  IGHV4-59*01  50   .....TCC...A....C.C...........G..........A............G..........................G.C......  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  T  Y  H  T  G  D  T  D  Y  N  P  S  L  R  N  R  V  A  I  S  M  D  A  S  K  N  
                    Query_4780   94   GGATCGGATATACCTATCACACTGGGGACACCGACTACAACCCCTCCCTCAGGAATCGAGTCGCCATATCAATGGACGCGTCCAAGAACC  183
V  88.3% (212/240)  IGHV4-59*01  140  ....T..G....T....T...G....AG....A..................A..G.......A........G.A...A............  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  D  L  N  N  W  G  W  A  G  
                    Query_4780   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACGGCTGCGGACACGGCCGTATACTACTGTGCGACCGACTTGAACAACTGGGGATGGGCAGGGG  273
V  88.3% (212/240)  IGHV4-59*01  230  ............................C.................G..T..........------------------------------  289
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (9/9)     IGHD7-27*01  3    -----------------------------------------------------------------------.........----------  11

                                      ---------------->                                  
                                      E  G  V  Y  D  V  W  G  Q  G  R  M  V  T  V  S  S  
                    Query_4780   274  AGGGTGTTTATGATGTCTGGGGCCAAGGGAGAATGGTCACCGTCTCTTCAG  324
J  97.6% (40/41)    IGHJ3*01     10   ----------....................C....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_109106

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            324     7e-91
IGHD4-17*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	25	2	0	92.6
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_4781   1    GGTCCCTGAGACTCTCCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  92.2% (226/245)  IGHV4-4*02   47   ..A.....TCC...A......C........................T..T........................................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  R  S  
                    Query_4781   91   TGGAGTGGATTGGGGAGATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCAAGTCTCGAGTCACCATGTCAGTAGACAGGTCCG  180
V  92.2% (226/245)  IGHV4-4*02   137  ................A....A..A..............A...................AG............A..........A....A  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      E  N  Q  F  S  L  M  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  
                    Query_4781   181  AGAACCAGTTCTCCCTGATGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTT  270
V  92.2% (226/245)  IGHV4-4*02   227  ..................A.....G........................................-------------------------  291
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD4-17*01  5    --------------------------------------------------------------------------.......---------  11
J  97.8% (45/46)    IGHJ6*02     17   -------------------------------------------------------------------------------------....A  21

                                      ------->                                 
                                      L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4781   271  TGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  311
J  97.8% (45/46)    IGHJ6*02     22   .........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_109107

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*04                                                                                           355     4e-100
IGHD6-19*01                                                                                           10.3    134   
IGHJ5*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*04	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGTCTTCCCGAGCGGGCT	CAGTG	AAT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTCTTCCCGAGCGGGCTCAGTGAATCC	ARGVFPSGLSES	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	72	3	0	96
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	45	6	0	88.2
CDR2-IMGT	152	175	24	17	7	0	70.8
FR3-IMGT	176	289	114	101	13	0	88.6
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	261	34	0	88.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  S  S  S 
                    Query_4782   2    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGGCAGTTCCAGC  91
V  88.5% (261/295)  IGHV1-69*04  1    ...........G...........G...............................................T..........CC.T....  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       I  Y  V  I  T  W  F  R  Q  A  P  G  Q  G  L  E  W  M  G  N  V  V  P  L  F  S  I  P  T  Y 
                    Query_4782   92   ATCTATGTTATCACCTGGTTCCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGAACGTCGTCCCTTTGTTTAGTATACCAACCTAC  181
V  88.5% (261/295)  IGHV1-69*04  91   .G.....C.....G....G.G...................................A.GGA..A.....A.CC..G.....G...A....  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  I  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  V  Q  D  R  I  T  I  T  A  D  T  S  T  S  T  A  Y  M  E  L  S  S  L  T  S  D  D 
                    Query_4782   182  GCACAGAAGGTCCAAGACAGAATCACGATTACCGCGGACACATCCACGAGCACGGCGTACATGGAACTGAGCAGCCTGACATCTGACGAC  271
V  88.5% (261/295)  IGHV1-69*04  181  .........T....G.G....G..................A............A..C........G.............G......G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  V  Y  Y  C  A  R  G  V  F  P  S  G  L  S  E  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4782   272  ACGGCCGTCTATTATTGTGCGAGAGGGGTCTTCCCGAGCGGGCTCAGTGAATCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  88.5% (261/295)  IGHV1-69*04  271  ........G.....C..........---------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                 
D  100.0% (5/5)     IGHD6-19*01  9    --------------------------------------------.....---------------------------------------  13
J  100.0% (36/36)   IGHJ5*02     16   ----------------------------------------------------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_23393

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD3-9*01                                                                                            44.9    5e-09
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGACCTCA	TACGATATTTTGACTGGTTATTA	ACAGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGACCTCATACGATATTTTGACTGGTTATTAACAGCTTTTGACTAC	ARGDLIRYFDWLLTAFDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	27	25	25	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	243	231	12	0	95.1


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        L  S  L  T  C  A  V  Y  G  G  S  F  R  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G  L  E  W
                    Query_4783   3    CCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCGTTCAGAGGTTACTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGTG  92
V  95.1% (231/243)  IGHV4-34*01  51   .................................C.....T.......A.....G....................................  140
                                        L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W

                                      ---------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IM
                                        I  G  E  I  D  Y  S  G  N  T  D  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q
                    Query_4783   93   GATTGGGGAAATCGATTATAGTGGAAACACCGACTACAGTCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCA  182
V  95.1% (231/243)  IGHV4-34*01  141  .............A..C.........G....A......AC..................................................  230
                                        I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q

                                      GT----------------------------------------------------><----------------------CDR3-IMGT---
                                        F  S  L  K  M  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  L  I  R  Y  F  D  W  L
                    Query_4783   183  GTTCTCCCTGAAGATGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCGACCTCATACGATATTTTGACTGGTT  272
V  95.1% (231/243)  IGHV4-34*01  231  .............C....C............................................---------------------------  293
                                        F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                           
D  100.0% (23/23)   IGHD3-9*01   5    -----------------------------------------------------------------------...................  23

                                      ------------------>                                  
                                        L  T  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4783   273  ATTAACAGCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  325
D  100.0% (23/23)   IGHD3-9*01   24   ....-------------------------------------------------  27
J  97.7% (42/43)    IGHJ4*02     6    ----------................................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_23392

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         385     4e-109
IGHD7-27*01                                                                                           18.0    0.65  
IGHJ5*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	CTAACTGGG	ACCGGGGCCCTTTGA	ACCAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTAACTGGGACCGGGGCCCTTTGAACCAC	ATNWDRGPLNH	290	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	70	1	0	98.6
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	102	12	0	89.5
CDR3-IMGT (germline)	290	293	4	4	0	0	100
Total	N/A	N/A	288	267	21	0	92.7


Alignments

                                        <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                           Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  R  F  T  S  
                    Query_4784     6    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCGCTGAGGATCTCCTGTAAGGGTTCTGGATACAGGTTTACCAGCT  95
V  92.7% (267/288)  IGHV5-10-1*01  5    ..............................................T................................C..........  94
                                           Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  

                                        ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                        Y  W  I  N  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  N  P  R  D  S  Y  I  N  Y  S  
                    Query_4784     96   ACTGGATCAACTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAACATTAATCCTCGTGACTCTTATATCAACTATAGCC  185
V  92.7% (267/288)  IGHV5-10-1*01  95   .........G..........................................G.GG...G.....A............C......C....  184
                                        Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  

                                        -------------------------------------------FR3-IMGT---------------------------------------
                                        P  S  F  Q  G  H  V  T  F  S  T  D  T  S  L  N  T  A  Y  L  Q  G  S  S  L  K  A  A  D  S  
                    Query_4784     186  CGTCCTTCCAAGGCCACGTCACCTTCTCGACTGACACCTCCCTCAACACTGCCTACCTGCAGGGGAGCAGCCTGAAGGCCGCGGACTCCG  275
V  92.7% (267/288)  IGHV5-10-1*01  185  .......................A....AG......AG...A...G................T.................T.....A...  274
                                        P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                        -------------><-----------CDR3-IMGT----------->                                  
                                        A  I  Y  Y  C  A  T  N  W  D  R  G  P  L  N  H  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4784     276  CCATATATTACTGTGCGACTAACTGGGACCGGGGCCCTTTGAACCACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  356
V  92.7% (267/288)  IGHV5-10-1*01  275  ....G.............---------------------------------------------------------------  292
                                        A  M  Y  Y  C  A                                                                 
D  100.0% (9/9)     IGHD7-27*01    1    ------------------.........------------------------------------------------------  9
J  94.9% (37/39)    IGHJ5*02       13   ------------------------------------------...C..............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_109102

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           378     3e-107
IGHD1-26*01                                                                                           10.3    131   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTCAC	GTGGG	GTTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATTTCACGTGGGGTTTCTTTGACTAC	VRDFTWGFFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  F  E  M  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_4785   2    CAGCTGGTGCAGTCTGGATTTGAGATGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGCTACACCTTTACCACCTTT  91
V  91.7% (266/290)  IGHV1-18*01  7    ..................GC....G..............................................T.............G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       P  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  T  Y  N  H  N  T  K  Y  A  Q 
                    Query_4785   92   CCTATCAGCTGGGTGCGGCAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACTTACAATCATAACACAAAGTATGCACAG  181
V  91.7% (266/290)  IGHV1-18*01  97   GG...............A........................................G.G........GG.........C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  L  T  M  T  T  D  T  S  T  E  T  A  Y  M  E  M  R  S  L  R  S  D  D  T  A 
                    Query_4785   182  AAGTTCCAGGGCAGACTCACCATGACCACAGACACATCCACGGAAACAGCCTACATGGAAATGAGGAGCCTGAGATCTGACGACACGGCC  271
V  91.7% (266/290)  IGHV1-18*01  187  ...C...........G..........................AGC..............GC.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       M  Y  Y  C  V  R  D  F  T  W  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4785   272  ATGTATTATTGTGTGAGAGATTTCACGTGGGGTTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  91.7% (266/290)  IGHV1-18*01  277  G.......C....C......-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  100.0% (44/44)   IGHJ4*02     5    -----------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_23394

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*07                                                                                           350     8e-99
IGHD1-7*01                                                                                            25.7    0.003
IGHJ3*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*07	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCACA	ACT	TATAACTGGAACT	TGGATGGTGTCA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAACTTATAACTGGAACTTGGATGGTGTCAATGCTTTTGATATC	TTTYNWNLDGVNAFDI	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	254	6	6	0	0	100
Total	N/A	N/A	254	239	15	0	94.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  N  F  S  N  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4786   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCAATTTCAGTAACGCCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.1% (239/254)  IGHV3-15*07  47   .......T.......................TT...C.....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  R  K  S  D  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_4786   91   AGTGGGTCGGCCGTATTAAAAGGAAAAGTGATGGTGAGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATTTCAAGAGATG  180
V  94.1% (239/254)  IGHV3-15*07  137  ......................C....C........G..........................................C..........  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  A  K  D  T  V  Y  L  Q  M  S  S  L  K  T  E  D  T  A  V  Y  H  C  T  T  T  Y  N  W  N  
                    Query_4786   181  ATGCAAAAGACACAGTGTATCTTCAAATGAGCAGCCTGAAAACCGAGGACACAGCCGTGTATCACTGTACCACAACTTATAACTGGAACT  270
V  94.1% (239/254)  IGHV3-15*07  227  ..T.....A....GC.......G.......A...............................T...........----------------  300
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (13/13)   IGHD1-7*01   3    -----------------------------------------------------------------------------.............  15

                                      R3-IMGT------------------>                                  
                                      L  D  G  V  N  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4786   271  TGGATGGTGTCAATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  330
J  100.0% (48/48)   IGHJ3*02     3    ------------................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_109100

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           318     5e-89
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_4787   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGGCTGGAG  90
V  91.4% (224/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G.A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_4787   91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.4% (224/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_4787   181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.4% (224/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_4787   271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_109101

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTCG	TATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCGTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4788   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_4788   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTTCCATATCAGTGGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ..................................G..................................A..........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  K  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  S  Y  G  S  G 
                    Query_4788   181  AAGAACAAGTTCTCCCTGAAGCTGACCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTCGTATGGTTCGGGG  270
V  96.4% (241/250)  IGHV4-31*03  229  ......C..................G............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (21/21)   IGHD3-10*01  8    ------------------------------------------------------------------------------............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4788   271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (21/21)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_23399

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           321     6e-90
IGHD3-22*01                                                                                           12.2    31   
IGHJ6*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAG	TCAT	CTATGA	CCCCCT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGAGTCATCTATGACCCCCTCTACGGGTTGGGCGTC	ARVIYDPLYGLGV	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	24	18	3	3	75
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	249	229	17	3	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  L  A  S  G  F  T  F  S  S  Y  E  F  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4789   1    GGTCCCTGAGACTCTCCTGTCTAGCCTCTGGATTCACCTTCAGTAGTTATGAATTCAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-48*03  47   ....................GC...............................A.G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  D  I  S  S  T     T  P  I  Y  Y  S  D  P  V  K  S  R  F  T  I  S  R  D  N  A  
                    Query_4789   91   AGTGGGTTTCAGATATTAGTAGTACT---ACTCCCATATACTACTCAGACCCTGTGAAGAGCCGATTCACCATCTCCAGAGACAACGCCA  177
V  92.0% (229/249)  IGHV3-48*03  137  ...........T.C..........G.GGT.G.A...........G.....T........G..............................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  K  S  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  V  I  Y  D  P  L  Y  
                    Query_4789   178  AGAAATCACTGCATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTTCTGTGCTAGAGTCATCTATGACCCCCTCTACG  267
V  92.0% (229/249)  IGHV3-48*03  227  ....C......T........................................T....A......G....---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-22*01  7    -------------------------------------------------------------------------......-----------  12
J  85.7% (42/49)    IGHJ6*02     14   -------------------------------------------------------------------------------------.....  18

                                      ---------->                                 
                                      G  L  G  V  W  G  L  G  A  P  V  P  V  S  S 
                    Query_4789   268  GGTTGGGCGTCTGGGGCCTAGGGGCCCCGGTCCCCGTCTCCTCA  311
J  85.7% (42/49)    IGHJ6*02     19   .TA...A...........A....A..A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_23398

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            367     5e-104
IGHD6-19*01                                                                                           18.0    0.57  
IGHJ4*02                                                                                              54.5    1e-11 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	CAAGG	AGTGCCTGGTAC	GGTGGG	GACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGCAAGGAGTGCCTGGTACGGTGGGGACCAC	AGARSAWYGGDH	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  D  Y  W  M  I  W  A  R  Q  A  P  G  K  G  L  
                    Query_4790   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACTGACTATTGGATGATCTGGGCCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-7*03   47   ..........................................G.AG...........G.....T..........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4790   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (242/249)  IGHV3-7*03   137  ..........................................................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  G  A  R  S  A  W  Y  G  
                    Query_4790   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCCGTGTATTACTGTGCGGGAGCAAGGAGTGCCTGGTACGGTG  270
V  97.2% (242/249)  IGHV3-7*03   227  ........................................G........................A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD6-19*01  10   --------------------------------------------------------------------------....G.......----  21

                                      ------->                                  
                                      G  D  H  W  G  Q  G  A  L  I  T  V  S  S  
                    Query_4790   271  GGGACCACTGGGGCCAGGGAGCCCTAATCACCGTCTCCTCAG  312
J  90.0% (36/40)    IGHJ4*02     9    --...T..............A....GG...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_109108

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           336     1e-94
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	CGGACGTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGACGTAACTTTAACTAC	ASGRNFNY	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4791   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACCTTCAGTACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-21*01  47   ................................T............G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  T  N  N  S  Y  V  S  Y  A  G  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_4791   91   AGTGGGTCTCATCCATTAGTACTAATAATTCTTACGTATCCTACGCGGGCTCAGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.5% (231/247)  IGHV3-21*01  137  .....................G..G..G.AG....A...A......A.A........A................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      K  T  S  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  S  G  R  N  F  N  Y  W  
                    Query_4791   181  AGACCTCCCTGTATCTGCAAATGAACACCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGCGGACGTAACTTTAACTACTGGG  270
V  93.5% (231/247)  IGHV3-21*01  227  ...A...A...................G........................G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  95.3% (41/43)    IGHJ4*02     4    ---------------------------------------------------------------------------.....G.........  18

                                                                  
                                      G  L  G  T  L  V  T  V  S  S
                    Query_4791   271  GCCTGGGAACCCTGGTCACCGTCTCCTC  298
J  95.3% (41/43)    IGHJ4*02     19   ...A........................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_109109

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*03                                                                                           294     7e-82
IGHD3-22*01                                                                                           23.8    0.012
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*03	IGHD3-22*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TAGTCCGAAAACCGCTGGGA	TATGACTATGAGAGTAGCGGT	GA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTAGTCCGAAAACCGCTGGGATATGACTATGAGAGTAGCGGTGATGACTAC	RK*SENRWDMTMRVAVMTT	260	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	121	68	59	7	2	86.8
CDR2-IMGT	122	145	24	9	0	15	37.5
FR3-IMGT	146	259	114	106	8	0	93
CDR3-IMGT (germline)	260	266	7	7	0	0	100
Total	N/A	N/A	266	231	18	17	86.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><-----------------------------FR2-IMG
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4792   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTTAGTAACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  86.8% (231/266)  IGHV3-23*03  47   ....................G......................C.G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      T-----------------------------><-------CDR2-IMGT------><----------------------------------
                                      E  W  V  *  A  L  L  V  G  V  V  V  V  E  G  V  A  A  H  T  T  Q  T  P  *  R  A  G  S  P  
                    Query_4792   91   AGTGGGTCTAGGCATTACTAGTAGGGGTGGTAGTAGTGGAGGGGGTGGCGGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCAT  180
V  86.8% (231/266)  IGHV3-23*03  137  .........CA.--...T.TA...C...........---------------.........T.............................  209
                                      E  W  V  S    V  I  Y  S  G  G  S  S                 T  Y  Y  A  D  S  V  K  G  R  F  T  I

                                      ------------------FR3-IMGT----------------------------------------------------><----------
                                      S  P  E  T  I  P  R  T  H  C  F  C  *  *  R  A  *  E  S  R  T  R  P  S  I  T  V  R  K  *  
                    Query_4792   181  CTCCAGAGACAATTCCAAGAACACACTGTTTCTGCTAATGAAGAGCCTGAGAGTCGAGGACACGGCCGTCTATTACTGTGCGAAAGTAGT  270
V  86.8% (231/266)  IGHV3-23*03  210  .........T..............G....A.....A......C..........C...............A................----  295
                                        S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K      

                                      -------------CDR3-IMGT----------------------->                                
                                      S  E  N  R  W  D  M  T  M  R  V  A  V  M  T  T  G  A  R  E  P  W  S  P  S  P  
                    Query_4792   271  CCGAAAACCGCTGGGATATGACTATGAGAGTAGCGGTGATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  348
D  85.7% (18/21)    IGHD3-22*01  2    ----------------...T.......T.....T...-----------------------------------------  22
J  100.0% (39/39)   IGHJ4*02     8    ---------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_142835

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           347     7e-98
IGHD5-12*01                                                                                           12.2    31   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTA	CAATAGAG	GGCTAC	AAACCAAAAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTACAATAGAGGGCTACAAACCAAAACAC	TTIEGYKPKH	249	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	252	4	4	0	0	100
Total	N/A	N/A	252	237	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  R  T  S  G  F  I  F  G  D  Y  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4793   1    GGTCCCTGAGACTCTCCTGTAGAACTTCTGGATTCATCTTTGGTGACTATGCTTTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  94.0% (237/252)  IGHV3-49*04  47   .....................C.G............C.........T......A...............................G....  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  G  K  A  Y  G  G  T  T  D  Y  A  A  S  V  R  G  R  F  T  V  S  R  D  
                    Query_4793   91   AGTGGGTAGGTTTCATTCGAGGCAAAGCTTATGGTGGGACAACAGACTACGCCGCGTCTGTGAGAGGCAGATTCACCGTCTCAAGAGATG  180
V  94.0% (237/252)  IGHV3-49*04  137  .................A..A.........................A................A.............A............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--
                                      D  S  E  S  I  A  Y  L  Q  M  N  T  L  K  T  E  D  T  G  V  Y  Y  C  T  T  I  E  G  Y  K  
                    Query_4793   181  ATTCCGAAAGCATCGCCTATCTGCAAATGAACACCCTGAAAACCGAGGACACAGGCGTGTATTATTGTACTACAATAGAGGGCTACAAAC  270
V  94.0% (237/252)  IGHV3-49*04  227  .....A...........................G....................C.........C.......------------------  298
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (6/6)     IGHD5-12*01  12   --------------------------------------------------------------------------------......----  17

                                      ------->                                  
                                      P  K  H  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_4793   271  CAAAACACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  312
J  97.2% (35/36)    IGHJ4*02     13   ------..................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_325260

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	276	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_4794   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  96.5% (276/286)  IGHV5-51*01  6    ..................................................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_4794   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  96.5% (276/286)  IGHV5-51*01  96   ......................A.......G.............G..........................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_4794   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAGCACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  96.5% (276/286)  IGHV5-51*01  186  ....................C...................A...........................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4794   271  CGTGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.5% (276/286)  IGHV5-51*01  276  .A..............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_316455

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            420     7e-120
IGHD3-22*01                                                                                           46.8    1e-09 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACACA	N/A	ATTACTATGATAGTAGTGGTTATT	CTTTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAATTACTATGATAGTAGTGGTTATTCTTTTTTTGACTAC	AHNYYDSSGYSFFDY	263	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	30	0	0	100
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	114	0	0	100
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	269	269	0	0	100


Alignments

                                       <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                         L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R
                     Query_4795   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCG  90
V  100.0% (269/269)  IGHV2-5*01   30   ..........................................................................................  119
                                         L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                       -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                         Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T
                     Query_4795   91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCAC  180
V  100.0% (269/269)  IGHV2-5*01   120  ..........................................................................................  209
                                         Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                       ---------------------FR3-IMGT----------------------------------------------------><-------
                                         I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  N
                     Query_4795   181  CATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAA  270
V  100.0% (269/269)  IGHV2-5*01   210  .........................................................................................-  298
                                         I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   
D  100.0% (24/24)    IGHD3-22*01  3    -----------------------------------------------------------------------------------------.  3

                                       ----------CDR3-IMGT----------------->                                  
                                         Y  Y  D  S  S  G  Y  S  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_4795   271  TTACTATGATAGTAGTGGTTATTCTTTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  341
D  100.0% (24/24)    IGHD3-22*01  4    .......................------------------------------------------------  26
J  100.0% (43/43)    IGHJ4*02     6    ----------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_325267

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_4796   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTA  90
V  97.6% (282/289)  IGHV5-51*03  6    ..............................................................................C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_4796   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  97.6% (282/289)  IGHV5-51*03  96   .......................................................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4796   181  GTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  ........................C....C....A..................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4796   271  CATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  97.6% (282/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (15/15)   IGHD6-19*01  4    ----------------------------------...............----------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   ----------------------------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_249288

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           274     8e-76
IGHD4-17*01                                                                                           21.8    0.040
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD4-17*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CATCT	ACTGCGGTGACTAC	TGA	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACATCTACTGCGGTGACTACTGATTTTGATGTC	ATSTAVTTDFDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	13	8	0	61.9
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	247	4	4	0	0	100
Total	N/A	N/A	247	211	36	0	85.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  N  G  S  L  R  R  S  S  Y  Y  W  G  W  V  R  Q  P  P  G  Q  G 
                    Query_4797   1    ACCCTGTCCCTCACCTGCAATGTGTCTAATGGCTCCCTCCGCAGAAGTTCTTACTATTGGGGCTGGGTCCGCCAGCCCCCAGGGCAGGGG  90
V  85.4% (211/247)  IGHV4-39*01  49   ...................C...C...GG.......A..A....T...AG......C.........A.................A.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  R  Y  F  S  G  A  Y  Y  Y  S  P  S  L  K  S  R  V  T  I  S  A  D  T  S 
                    Query_4797   91   CTGGAGTGGATTGGGAGTCGTTATTTTAGTGGGGCCTACTACTACAGTCCGTCCCTCAAGAGCCGAGTCACCATATCCGCAGACACGTCG  180
V  85.4% (211/247)  IGHV4-39*01  139  ..................ATC....A.......AG.AC........AC..............T................T.........C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  H  F  T  L  T  L  T  S  L  T  A  A  D  T  A  I  Y  Y  C  A  T  S  T  A  V  T  T  D 
                    Query_4797   181  AAAAATCATTTCACCCTGACGTTGACGTCTCTGACCGCCGCAGACACGGCTATTTATTACTGTGCGACATCTACTGCGGTGACTACTGAT  270
V  85.4% (211/247)  IGHV4-39*01  229  ..G..C..G...T......A.C...GC...G....................G.G.............-----------------------  295
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  92.9% (13/14)    IGHD4-17*01  3    ------------------------------------------------------------------------...A..........----  16
J  97.7% (43/44)    IGHJ3*01     7    -----------------------------------------------------------------------------------------.  7

                                      -------->                                  
                                       F  D  V  W  G  R  G  T  M  V  T  V  S  S  
                    Query_4797   271  TTTGATGTCTGGGGCCGAGGGACAATGGTCACCGTCTCTTCAG  313
J  97.7% (43/44)    IGHJ3*01     8    ................A..........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_249289

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           358     3e-101
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	N/A	N/A	CCCCGCATCGCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCCGCATCGCGTTTTGACTAC	ARGPASRFDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  F  G  G  S  F  R  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4798   1    ACCCTGTCCCTCACCTGCGCTGTCTTTGGTGGGTCCTTCAGGGGGTCCTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  96.7% (237/245)  IGHV4-34*01  49   .........................A...............T..T.A...........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_4798   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAATTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-34*01  139  ...................................C....................................G.................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  P  A  S  R  F  D  Y  W 
                    Query_4798   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGTCCGCCGCGGACACGGCTGTATATTACTGTGCGAGAGGCCCCGCATCGCGTTTTGACTACTGG  270
V  96.7% (237/245)  IGHV4-34*01  229  ...........................A...................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
J  100.0% (43/43)   IGHJ4*02     6    ------------------------------------------------------------------------------............  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_4798   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (43/43)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_249284

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           357     1e-100
IGHD3-3*01                                                                                            21.8    0.041 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGGCTCGTGCCTG	GGAGTGGTTAT	GAAGCCATACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGGCTCGTGCCTGGGAGTGGTTATGAAGCCATACCTGACTAC	AKRLVPGSGYEAIPDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4799   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTTAGCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-23*01  47   ......................................T..................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  D  T  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4799   91   AATGGGTCTCAGGTATTAGTGGTAGTGGTGGTGACACATACTACGCAGACGCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (238/248)  IGHV3-23*01  137  .G..........C...................AG................T.......................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  F  C  A  K  R  L  V  P  G  S  G  
                    Query_4799   181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTATATTTCTGTGCGAAAAGGCTCGTGCCTGGGAGTGGTT  270
V  96.0% (238/248)  IGHV3-23*01  227  ...A................................C....................A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD3-3*01   15   ---------------------------------------------------------------------------------.........  23

                                      T------------------>                                
                                      Y  E  A  I  P  D  Y  W  G  Q  G  P  L  V  T  V  S  S
                    Query_4799   271  ATGAAGCCATACCTGACTACTGGGGCCAGGGACCCCTGGTCACCGTCTCCTC  322
D  100.0% (11/11)   IGHD3-3*01   24   ..--------------------------------------------------  25
J  97.4% (38/39)    IGHJ4*02     8    -------------...................A...................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_249285

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD6-6*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTC	ATTREQLVPIFDF	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	268	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  L  S  S  Y
                    Query_4800   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATTTCCTGTAAGGGTTCTGGATACAGATTAAGCAGTTA  90
V  93.4% (268/287)  IGHV5-51*01  6    ......................................................C.......................C..T.C...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  E  T  K  Y  S  P
                    Query_4800   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCGTCTATCCTGGTGACTCTGAGACCAAATACAGCCC  180
V  93.4% (268/287)  IGHV5-51*01  96   C.......G..........................................G...A...................T....G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  A  S  G  T  A  F  L  Q  W  D  S  L  K  A  S  D  T  A
                    Query_4800   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCTGACAAGGCCAGCGGCACCGCCTTCCTGCAGTGGGACAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (268/287)  IGHV5-51*01  186  .......C......................C......T...T.A.........A..........AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_4800   271  CATGTATTACTGTGCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  356
V  93.4% (268/287)  IGHV5-51*01  276  .................---------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------.......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_249287

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            333     1e-93
IGHD3-3*02                                                                                            12.2    31   
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTT	GCATTT	CGATCTCCCACGAGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGCATTTCGATCTCCCACGAGGCATGGACGTC	ARLHFDLPRGMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  T  Y  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_4801  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGGGGCTCCATCACCAGTACTTACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  93.5% (229/245)  IGHV4-4*01  49   ..................G....C.....T..........G.....G.A.........G...........................G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  S  G  S  P  H  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_4801  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCCCCCACTACAGTCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  93.5% (229/245)  IGHV4-4*01  139  .................................A..A......AC.............................................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                      N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  W  C  A  R  L  H  F  D  L  P  R  G 
                    Query_4801  181  AACCAGTTCTCCCTGAAGTTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTGGTGTGCGAGGTTGCATTTCGATCTCCCACGAGGC  270
V  93.5% (229/245)  IGHV4-4*01  229  ..................C....C.............................T..C........-------------------------  293
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  100.0% (6/6)     IGHD3-3*02  7    --------------------------------------------------------------------......----------------  12

                                     -------->                                 
                                      M  D  V  W  G  Q  G  T  T  A  I  V  P  S 
                    Query_4801  271  ATGGACGTCTGGGGCCAAGGGACCACGGCCATCGTCCCCTCA  312
J  92.9% (39/42)    IGHJ6*02    21   ............................T..C....T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_249282

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            279     3e-77
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	13	8	0	61.9
FR3-IMGT	127	240	114	98	16	0	86
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	212	34	0	86.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4802   1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  86.2% (212/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  G  G  P  F  N  Y  A  P  A  L  E  S  R  V  I  I  S  V  D  K  S  K 
                    Query_4802   91   GAATGGATTGGGGAGATCCATCATGGCGGACCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCATCATCTCAGTAGACAAGTCCAAG  180
V  86.2% (212/246)  IGHV4-4*01   139  ..G...........A...T.....A.T..GAG.AC.......AAC...T.....A............C...A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_4802   181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  86.2% (212/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_4802   271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_232152

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           300     8e-84
IGHD6-19*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	T	AGTGGCTGG	GACCACGTCTCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAGTGGCTGGGACCACGTCTCT	AKDSGWDHVS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	9	2	0	81.8
CDR1-IMGT	25	48	24	20	4	0	83.3
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	129	30	21	3	6	70
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	238	217	15	6	91.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  N  T  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  
                    Query_4803   14   GTGCAGTCTCCGGATTCACATTTAACACCTATGGCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGGTATCA  103
V  91.2% (217/238)  IGHV3-23*01  65   ......C...T........C....G..G.....C..................................................C...T.  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      -------CDR2-IMGT---------><----------------------------------------------------FR3-IMGT---
                                      S  S  S  D  G  G  G  R  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  A  K  N  T  L  
                    Query_4803   104  GTAGTAGTGATGGTGGTGGTCGCACAGACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACATTGCCAAGAACACACTGT  193
V  91.2% (217/238)  IGHV3-23*01  155  ..G......------.....A.....T.............................................A.T..........G....  238
                                      S  G  S        G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  

                                      -------------------------------------------------><----------CDR3-IMGT--------->          
                                      Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  S  G  W  D  H  V  S  W  G  Q  
                    Query_4803   194  ATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAAAGATAGTGGCTGGGACCACGTCTCTTGGGGCCAGG  283
V  91.2% (217/238)  IGHV3-23*01  239  ............................G.............................--------------------------------  296
                                      Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                   
D  100.0% (9/9)     IGHD6-19*01  10   -----------------------------------------------------------.........----------------------  18
J  100.0% (34/34)   IGHJ4*02     15   --------------------------------------------------------------------------------..........  24

                                                              
                                      G  T  L  V  T  V  S  S  
                    Query_4803   284  GAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (34/34)   IGHJ4*02     25   ........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_107439

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD2-15*01                                                                                           10.3    133   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CGAGAAG	GGTGG	CGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGACACGAGAAGGGTGGCGGGGCGAACGACTAC	VRHEKGGGANDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	6	2	0	75
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P  N  Y
                    Query_4804   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCCAATTA  90
V  93.8% (273/291)  IGHV5-51*01  6    ....................................C........................................GC...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  A  D  S  D  T  R  Y  S  L
                    Query_4804   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAACATCTATCCTGCTGACTCTGACACCAGATACAGTCT  180
V  93.8% (273/291)  IGHV5-51*01  96   .....................................................T...........G.........T...........C.C  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4804   181  GACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACACCGC  270
V  93.8% (273/291)  IGHV5-51*01  186  .T.....C.............................................................C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4804   271  CGTGTATTATTGTGTCAGACACGAGAAGGGTGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  351
V  93.8% (273/291)  IGHV5-51*01  276  .A.......C....CG.....------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                               
D  100.0% (5/5)     IGHD2-15*01  14   ----------------------------.....------------------------------------------------  18
J  97.4% (37/38)    IGHJ4*02     9    -------------------------------------------....................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_156078

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            349     2e-98
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	CCC	TTGGAGTGGTTCTTATA	GCGGTATAATAACCAGGGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGCCCTTGGAGTGGTTCTTATAGCGGTATAATAACCAGGGGTGCTTTTCATATT	VSPWSGSYSGIITRGAFHI	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	245	5	4	1	0	80
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  G  V  S  G  G  S  I  S  N  S  Y  W  W  S  W  V  R  Q  P  P  G  K  G  P 
                    Query_4805  1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGTGGCTCCATCAGCAATAGTTATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCCG  90
V  95.5% (234/245)  IGHV4-4*02  49   ...................C.......................G....A.C.....................................T.  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  V  Y  H  S  G  S  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_4805  91   GAGTGGATTGGGGAAGTCTATCATAGTGGGAGCACCAATTACAACCGGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  95.5% (234/245)  IGHV4-4*02  139  ...............A......................C.......C...........................................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                      N  H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  V  S  P  W  S  G  S  Y  S  G 
                    Query_4805  181  AACCACTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGTGAGCCCTTGGAGTGGTTCTTATAGCGGT  270
V  95.5% (234/245)  IGHV4-4*02  229  .....G................G......................................C...-------------------------  293
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  94.1% (16/17)    IGHD3-3*01  13   --------------------------------------------------------------------...........A.....-----  29

                                     MGT----------------------->                                  
                                      I  I  T  R  G  A  F  H  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4805  271  ATAATAACCAGGGGTGCTTTTCATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  331
J  95.7% (45/47)    IGHJ3*02    4    --------------.......G....C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_156079

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     3e-93
IGHD6-13*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTT	TATAACAGCAGTTGG	GTGCTCGA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTTATAACAGCAGTTGGGTGCTCGATGACTTC	ARDFYNSSWVLDDF	239	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	23	1	0	95.8
FR3-IMGT	125	238	114	107	7	0	93.9
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	232	222	10	0	95.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  R  I  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  
                    Query_4806   15   GTGCAGCCTCTGGATTCACCTTCAGAATCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTA  104
V  95.7% (222/232)  IGHV3-21*01  65   .........................T.G..............................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  S  T  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  R  S  L  Y  L  
                    Query_4806   105  GTAGTAGTACTAGTTACATATATTATGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAGATCACTGTATCTGC  194
V  95.7% (222/232)  IGHV3-21*01  155  .........G............C..C.................................................AC.............  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      H  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  Y  N  S  S  W  V  L  D  D  F  W  
                    Query_4806   195  ACATGAACAACCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGATTTTTATAACAGCAGTTGGGTGCTCGATGACTTCTGGG  284
V  95.7% (222/232)  IGHV3-21*01  245  .A.......G........................G.................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  86.7% (13/15)    IGHD6-13*01  4    --------------------------------------------------------....G......C...-------------------  18
J  97.4% (38/39)    IGHJ4*02     8    -------------------------------------------------------------------------------.....A.....  18

                                                                  
                                      G  Q  G  T  L  V  T  V  S  S
                    Query_4806   285  GCCAGGGAACCCTGGTCACCGTCTCCTC  312
J  97.4% (38/39)    IGHJ4*02     19   ............................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_156076

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD1-1*01                                                                                            18.0    0.59 
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCAGTG	GGTACAACT	TTGGGAAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGGTACAACTTTGGGAATAACTGGTTCGACCCG	ARDPTGSGYNFGNNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  H  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4807   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGTCATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...............................G..........AG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  K  G  G  I  T  N  H  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_4807   91   TGGATTGGATATGTCTATAAGGGCGGGATCACCAACCACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G...A.....T.CA.T....G.......T...................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  H  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_4807   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCTGACACGGCCATATATCACTGTGCGAGAGATCCTACCGGCAGTGGGTACAACTTT  270
V  93.5% (229/245)  IGHV4-59*01  229  ...................................G.........G.G...T.............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD1-1*01   1    -------------------------------------------------------------------------------.........--  9

                                      -------------------->                                  
                                       G  N  N  W  F  D  P  W  G  P  G  T  L  V  T  V  S  S  
                    Query_4807   271  GGGAATAACTGGTTCGACCCGTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  325
J  95.9% (47/49)    IGHJ5*02     3    ------..............C.......A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_156077

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           336     2e-94
IGHD2-15*01                                                                                           14.1    9.9  
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	GGCC	GGATATT	CATCTGATGGACGTGAATATATGACCCCGTTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGGGCCGGATATTCATCTGATGGACGTGAATATATGACCCCGTTGTTTGACTTT	SRAGYSSDGREYMTPLFDF	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	76	69	63	6	0	91.3
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	19	5	0	79.2
FR3-IMGT	176	289	114	98	16	0	86
CDR3-IMGT (germline)	290	294	5	4	1	0	80
Total	N/A	N/A	287	251	36	0	87.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  V  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I  N  Y 
                    Query_4808   8    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGTCTCAGTGACAATCTCCTGCCAGGCTTCCGGTTACAGTTTTATCAACTAC  97
V  87.5% (251/287)  IGHV1-18*04  7    ........................................C........AGG........A.......T.......CC....C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  P  H  K  G  N  T  K  Y  A  Q 
                    Query_4808   98   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAGGGGCTCGAGTGGATGGGTTGGATCGGCCCGCACAAAGGTAACACAAAATATGCACAG  187
V  87.5% (251/287)  IGHV1-18*04  97   ........C.......................A.....T...........A......A..G.TT....T...........C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  H  L  D  V  R  N  L  R  S  D  D  T  A 
                    Query_4808   188  AGTTTCCAGGGCAGAGTCACGATGACCACAGACACATTGACGGGCACAGCTCACCTGGACGTGAGGAACCTGCGATCTGACGACACGGCC  277
V  87.5% (251/287)  IGHV1-18*04  187  .AGC................C................CC...A.......CT..A....GC......G....A.................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  S  R  A  G  Y  S  S  D  G  R  E  Y  M  T  P  L  F  D  F  W  G  Q  G  T  P  V 
                    Query_4808   278  GTCTATTACTGTTCGAGGGCCGGATATTCATCTGATGGACGTGAATATATGACCCCGTTGTTTGACTTTTGGGGCCAGGGAACCCCGGTC  367
V  87.5% (251/287)  IGHV1-18*04  277  ..G.........G....-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  100.0% (7/7)     IGHD2-15*01  2    ---------------------.......--------------------------------------------------------------  8
J  90.7% (39/43)    IGHJ4*02     6    ------------------------------------------------------------.......AC................T....  35

                                                   
                                       S  V  S  S  
                    Query_4808   368  TCCGTCTCCTCAG  380
J  90.7% (39/43)    IGHJ4*02     36   A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_156074

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           319     2e-89
IGHD2-21*02                                                                                           14.1    8.1  
IGHJ2*01                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-21*02	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CA	GGTGACT	CAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGGTGACTCAGTACTGGTACTTCGATCTC	ARQVTQYWYFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  D  T  Y  S  M  N  W  V  R  Q  T  P  G  K  G  L  
                    Query_4809   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCGATACCTACAGCATGAACTGGGTCCGCCAGACTCCAGGGAAGGGGCTGG  90
V  91.1% (226/248)  IGHV3-21*01  47   ....................................C....AG..G...T.....................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  T  G  S  S  Y  K  Y  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4809   91   AGTGGGTCGCATCTATTAGTACTGGTAGTAGTTACAAATACTATGCAGCGTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.1% (226/248)  IGHV3-21*01  137  ........T....C.......G.A............T......C....AC..A.....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  G  D  D  T  A  I  Y  Y  C  A  R  Q  V  T  Q  Y  W  Y  
                    Query_4809   181  AAAACTCACTCTTTCTGCAAATGAACAGCCTGAGAGGCGACGACACGGCTATATATTACTGTGCGAGACAGGTGACTCAGTACTGGTACT  270
V  91.1% (226/248)  IGHV3-21*01  227  .G........G.A.......................C...G.........G.G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-21*02  14   ----------------------------------------------------------------------.......-------------  20
J  98.1% (51/52)    IGHJ2*01     2    --------------------------------------------------------------------------------..........  11

                                      ------->                                  
                                      F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4809   271  TCGATCTCTGGGGCCGCGGCACCCTGGTCACTGTCTCCTCAG  312
J  98.1% (51/52)    IGHJ2*01     12   ................T.........................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_156075

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         347     7e-98
IGHD5-12*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACAAGTCGTCC	GATATGGTGGCTAC	CTCTTGGAGGGTGGAAC	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACAAGTCGTCCGATATGGTGGCTACCTCTTGGAGGGTGGAACCTTCGACTAC	AREQVVRYGGYLLEGGTFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  L  S  T  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4810     1    GGTCCCTGAGACTCTCCTGTGCAGCTTCTGGATTCACCTTGAGCACCTATTCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-30-3*01  47   .........................C..............C..T.G....G.......................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  L  I  S  S  D  G  S  T  E  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4810     91   AGTGGGTGGCACTTATATCATCTGATGGAAGCACTGAATTCTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (236/250)  IGHV3-30-3*01  137  ...........G.........A...........A.A...A..................................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------------CD
                                        K  N  T  L  F  L  Q  M  N  S  L  R  G  G  D  T  A  V  Y  Y  C  A  R  E  Q  V  V  R  Y  G  
                    Query_4810     181  AGAACACGCTGTTTCTGCAAATGAACAGCCTGAGAGGTGGGGACACGGCTGTCTATTACTGTGCGAGAGAACAAGTCGTCCGATATGGTG  270
V  94.4% (236/250)  IGHV3-30-3*01  227  ............A.......................C..A............G.................--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.9% (13/14)    IGHD5-12*01    4    ---------------------------------------------------------------------------------.....A...  12

                                        R3-IMGT------------------------>                                  
                                        G  Y  L  L  E  G  G  T  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4810     271  GCTACCTCTTGGAGGGTGGAACCTTCGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  336
D  92.9% (13/14)    IGHD5-12*01    13   .....-------------------------------------------------------------  17
J  95.5% (42/44)    IGHJ4*02       5    ----------------------...T...................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_156072

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           302     3e-84
IGHD3-16*01                                                                                           12.2    31   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGG	TGGGGG	GGCCCCGGTAT	TACGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGGTGGGGGGGCCCCGGTATTACGCTATGGACGTC	AREGVGGPRYYAMDV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	219	26	0	89.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  M  S  D  F  Y  W  S  W  L  R  Q  P  P  G  K  A  L  E 
                    Query_4811   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGCTTCCATGAGTGACTTCTACTGGAGTTGGCTCCGGCAGCCCCCAGGGAAGGCACTGGAG  90
V  89.4% (219/245)  IGHV4-59*01  49   ..................A............GC.....C...AGT.A.........C...A.....................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  T  N  H  N  P  S  L  R  N  R  V  T  I  S  V  D  R  S  K  N 
                    Query_4811   91   TGGATTGGGTACATCTATTACACTGGGAGTACCAACCACAATCCCTCCCTCAGGAATCGAGTCACCATTTCAGTAGACAGGTCCAAGAAC  180
V  89.4% (219/245)  IGHV4-59*01  139  ...........T..........G......C......T....C..........A..G............A..........C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  E  G  V  G  G  P  R  Y  Y 
                    Query_4811   181  CAGTTCTCCCTGAAGTTGACTTCTGTGACCGCTGCGGACACGGCCATATATTATTGTGCGAGAGAGGGGGTGGGGGGGCCCCGGTATTAC  270
V  89.4% (219/245)  IGHV4-59*01  229  ...............C...GC........................G.G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------......--------------  22
J  97.9% (47/48)    IGHJ6*02     15   ---------------------------------------------------------------------------------------...  17

                                      ----------->                                 
                                       A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4811   271  GCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  315
J  97.9% (47/48)    IGHJ6*02     18   .G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_156073

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           10.3    131   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_4812   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  95.2% (276/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  F  A  Q 
                    Query_4812   92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTTTGCACAG  181
V  95.2% (276/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_4812   182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4812   272  ATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  95.2% (276/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_66580

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  G 
                    Query_4813   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGGG  90
V  90.6% (222/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C..................A.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  A  S  V  D  T  S  K  S 
                    Query_4813   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCGCTTCAGTAGACACGTCCAAGAGC  180
V  90.6% (222/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T....ATA...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  I  S  L  S  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_4813   181  CAGATCTCCCTGAGCCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  90.6% (222/245)  IGHV4-59*01  229  ...T.........AG........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_4813   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_156071

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           343     2e-96
IGHD7-27*01                                                                                           16.1    2.3  
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	261	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	47	4	0	92.2
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	100	14	0	87.7
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	243	24	0	91


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  
                    Query_4814   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGC  90
V  91.0% (243/267)  IGHV4-59*01  26   ................T............................................C...A..T.........GC..........  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  
                    Query_4814   91   AGCCCCCAGGCAAGGGACTGGAGTGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCA  180
V  91.0% (243/267)  IGHV4-59*01  116  ..........G....................G...A.........G.................A..C.......A...............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  A  D  P  S  K  N  Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  
                    Query_4814   181  TATCAGCGGACCCGTCCAAGAATCAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGAC  270
V  91.0% (243/267)  IGHV4-59*01  206  ......TA...A..........C...........G...C....C...........T............G.G....A...........---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     
D  100.0% (8/8)     IGHD7-27*01  4    ----------------------------------------------------------------------------------------..  5

                                      --CDR3-IMGT----------->                                  
                                      L  G  R  R  W  F  D  P  W  G  Q  G  A  L  V  S  V  S  S  
                    Query_4814   271  TGGGGAGGCGTTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  327
D  100.0% (8/8)     IGHD7-27*01  6    ......---------------------------------------------------  11
J  95.7% (44/46)    IGHJ5*02     6    -----------........................A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_310240

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           350     8e-99
IGHD2-15*01                                                                                           25.7    0.003
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GCCG	GGATATTGTAGTG	ATAGCAAGTGT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGCCGGGATATTGTAGTGATAGCAAGTGTTACTATGGTATGGACCTC	AKEPGYCSDSKCYYGMDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  I  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4815   1    GGTCCCTGAGACTCTCCTGTATAGCCTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-30*18  47   ....................GC.......................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4815   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCAG  180
V  94.8% (237/250)  IGHV3-30*18  137  ..............................................A.........................................CA  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      E  S  T  L  Y  L  H  M  D  P  L  R  A  E  D  T  A  V  Y  Y  C  A  K  E  P  G  Y  C  S  D  
                    Query_4815   181  AGAGCACACTGTATCTGCATATGGACCCCTTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGAGCCGGGATATTGTAGTGATA  270
V  94.8% (237/250)  IGHV3-30*18  227  ...A...G...........A...A..AG.C........................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (13/13)   IGHD2-15*01  2    --------------------------------------------------------------------------.............---  14

                                      IMGT--------------------->                                 
                                      S  K  C  Y  Y  G  M  D  L  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_4815   271  GCAAGTGTTACTATGGTATGGACCTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  329
J  94.1% (48/51)    IGHJ6*02     12   --------.....C.........G........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_308051

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            294     6e-82
IGHD3-10*01                                                                                           12.2    32   
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GGGGAG	GGGGAATG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGAGGGGGAATGTACTACTACCACGGTTTGGACGTG	ARGGGGMYYYHGLDV	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	21	8	0	72.4
CDR1-IMGT	30	59	30	24	3	3	80
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	252	222	27	3	88.1


Alignments

                                      <---------FR1-IMGT----------><----------CDR1-IMGT---------><--------------------FR2-IMGT--
                                         S  L  R  L  S  C  V  I  S  G  D  S  V  S  S  T  T  N  W  W  T  W  V  R  Q  P  P  G  K  
                    Query_4816   1    GGTCCCTGAGACTCTCCTGTGTTATCTCTGGTGACTCCGTCAGCAGTACGACTAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGG  90
V  88.1% (222/252)  IGHV4-4*02   47   ..A.....TCC...A....C.C.G.........G....A.........G---...........G..........................  133
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S     N  W  W  S  W  V  R  Q  P  P  G  K  

                                      -------------------><-----CDR2-IMGT-----><------------------------------------------------
                                      G  P  Q  W  I  G  E  I  L  H  T  G  S  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  I  H  K  
                    Query_4816   91   GGCCGCAATGGATTGGGGAAATCCTTCATACTGGGAGTACCAACTACGACCCGTCCCTCAAGAGTCGAGTCACCATATCAATACACAAGT  180
V  88.1% (222/252)  IGHV4-4*02   134  ...T.G.G...............TA.....G......C.........A................................G..G......  223
                                      G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  

                                      ----FR3-IMGT----------------------------------------------------><-----------------CDR3-IM
                                      S  E  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  G  M  Y  
                    Query_4816   181  CCGAGAATCAGTTTTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGCGAGGGGGAGGGGGAATGTACT  270
V  88.1% (222/252)  IGHV4-4*02   224  ..A....C.....C.............G........................................A...------------------  295
                                      S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                    
D  100.0% (6/6)     IGHD3-10*01  16   ------------------------------------------------------------------------......------------  21
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------------------------------------------------....  9

                                      GT----------------->                                 
                                      Y  Y  H  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4816   271  ACTACCACGGTTTGGACGTGTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  94.7% (54/57)    IGHJ6*02     10   .....T.....A.......C.................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_308050

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           371     7e-105
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTAGA	TCAGGA	TGTACTAATACCAGCTGCT	CTCCGGAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTAGATCAGGATGTACTAATACCAGCTGCTCTCCGGATCTACTACTACGGTTTGGACGTC	AVDQDVLIPAALRIYYYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  V  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4817   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTGTTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  97.2% (244/251)  IGHV4-61*08  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  S  G  I  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4817   91   CTGGAGTGGATTGGGTATATCTATAACAGTGGGATCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  97.2% (244/251)  IGHV4-61*08  139  ........................T.........G.......................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       T  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  V  D  Q  D  V  L  I  P 
                    Query_4817   181  ACGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGGTAGATCAGGATGTACTAATACCA  270
V  97.2% (244/251)  IGHV4-61*08  229  .A.......................G........................................AG...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.5% (17/19)    IGHD2-2*01   8    -----------------------------------------------------------------------------....G..G.....  20

                                      CDR3-IMGT-------------------------->                                 
                                       A  A  L  R  I  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4817   271  GCTGCTCTCCGGATCTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  339
D  89.5% (17/19)    IGHD2-2*01   21   ......---------------------------------------------------------------  26
J  98.2% (54/55)    IGHJ6*02     8    --------------.............A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_308052

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            269     2e-74
IGHD2-15*01                                                                                           16.1    2.3  
IGHJ4*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-15*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGAGATGCTATAACAACG	GCTGCTAC	GGGGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACCGAGATGCTATAACAACGGCTGCTACGGGGGGCTACTTTGATAAC	AKDRDAITTAATGGYFDN	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	11	13	0	45.8
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	211	39	0	84.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  I  F  G  H  Y  V  M  H  W  V  R  Q  R  P  G  K  G  L  
                    Query_4818   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCATTTTTGGTCATTATGTCATGCACTGGGTCCGGCAACGTCCGGGGAAGGGCCTGG  90
V  84.4% (211/250)  IGHV3-9*01   47   .....................C..............CC....A.G......C...................GC...A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  L  G  Y  D  D  V  P  V  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  A  
                    Query_4818   91   AGTGGGTCGCAGGTCTTGGCTACGATGATGTTCCCGTGGGTTATGCGGATTCTGTGAAGGGGCGATTCACCATATCCAGAGACACCGCCG  180
V  84.4% (211/250)  IGHV3-9*01   137  ........T.....A..A.T.GGA..AG..G.AG.A.A..C........C...........C...........C..........A....A  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      V  R  S  L  Y  L  Q  M  D  S  L  R  P  D  D  T  A  F  Y  Y  C  A  K  D  R  D  A  I  T  T  
                    Query_4818   181  TGAGGTCCCTCTATCTGCAGATGGACAGTCTGCGACCTGACGACACGGCCTTCTATTACTGTGCAAAAGACCGAGATGCTATAACAACGG  270
V  84.4% (211/250)  IGHV3-9*01   227  A..AC.....G........A...A........A..G....G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD2-15*01  21   -----------------------------------------------------------------------------------------.  21

                                      IMGT--------------------->                                  
                                      A  A  T  G  G  Y  F  D  N  W  G  H  G  V  L  V  T  V  A  S  
                    Query_4818   271  CTGCTACGGGGGGCTACTTTGATAACTGGGGCCACGGAGTCCTGGTCACCGTCGCCTCAG  330
D  100.0% (8/8)     IGHD2-15*01  22   .......-----------------------------------------------------  28
J  87.2% (41/47)    IGHJ4*01     2    -------------.........CT..........A...AC.............T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_308055

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           297     7e-83
IGHD3-3*01                                                                                            12.2    31   
IGHJ3*01                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCT	TTACGA	GGGGCTAACTTTTCCTT	TCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCTTTACGAGGGGCTAACTTTTCCTTTC	ARDLYEGLTFPF	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	217	27	0	88.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  P  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_4819   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTCCTTACTTCTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAGT  93
V  88.9% (217/244)  IGHV4-59*01  50   .....TCC...A....C........................AG.....A........................A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  Y  I  N  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  N  S  
                    Query_4819   94   GGCTAGGATATATCAATTACACTGGGAGTACCAACTACAATCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAACAGCC  183
V  88.9% (217/244)  IGHV4-59*01  140  ..A.T..G......T......G......C...........C..................G.........................G.A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  E  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  Y  E  G  L  T  F  P  
                    Query_4819   184  AATTCTCCCTGGAGTTGTCTTCTGTGACCGCTGCGGACACGGCCGTGTACTATTGTGCGAGAGACCTTTACGAGGGGCTAACTTTTCCTT  273
V  88.9% (217/244)  IGHV4-59*01  230  .G.........A..C..AGC.............................T..C...........--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD3-3*01   4    -------------------------------------------------------------------......-----------------  9

                                      ->                                  
                                      F  W  G  P  G  T  M  V  T  V  S  S  
                    Query_4819   274  TCTGGGGCCCAGGGACAATGGTCACCGTCTCCTCAG  309
J  94.4% (34/36)    IGHJ3*01     15   .........A.....................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_308054

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           358     4e-101
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCACCCAA	TATGGTTCGGAGAGT	CTG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCACCCAATATGGTTCGGAGAGTCTG	ARATQYGSESL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	259	30	0	89.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_4820   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACTTCCTAT  91
V  89.6% (259/289)  IGHV1-18*01  7    .................................................A.................................CAG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  S  W  V  R  Q  A  P  G  G  G  L  E  W  M  G  W  S  G  P  N  N  D  D  A  H  Y  G  H 
                    Query_4820   92   GGTGTCAGCTGGGTGCGCCAGGCCCCTGGAGGAGGGCTTGAATGGATGGGATGGAGCGGCCCTAACAATGATGACGCACACTATGGACAT  181
V  89.6% (259/289)  IGHV1-18*01  97   ...A.............A............CA.........G.............T.A..G..T......G.A..A..A......C...G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  L  R  G  R  V  T  I  T  T  D  T  S  T  T  T  S  F  M  E  L  R  S  L  R  S  A  D  T  A 
                    Query_4820   182  AGCCTCCGGGGCAGAGTCACCATTACCACAGACACATCAACGACCACATCCTTCATGGAGTTGAGGAGCCTGAGATCTGCCGACACGGCC  271
V  89.6% (259/289)  IGHV1-18*01  187  .AG....A...............G..............C....G....G...A.......C..................A..........  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  A  T  Q  Y  G  S  E  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4820   272  GTATATTACTGTGCGAGAGCCACCCAATATGGTTCGGAGAGTCTGTGGGGCCAGGGAACCCTGGTCACAGTCTCCTCAG  350
V  89.6% (259/289)  IGHV1-18*01  277  ..G................------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                              
D  93.3% (14/15)    IGHD3-10*01  8    ---------------------------..........G....-------------------------------------  22
J  97.1% (33/34)    IGHJ4*02     15   ---------------------------------------------.......................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_308057

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD3-16*02                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTATCG	ACATTGGTTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTATTTGACTAT	ARHYRHWLFDY	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	238	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  L  T  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_4821   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCCTCACCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (238/251)  IGHV4-39*01  49   ...............................G....A...G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4821   91   CTGGAGTGGATTGGGAGTTTGTATTATAGTGGCAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  94.8% (238/251)  IGHV4-39*01  139  ..................A.C...........G...............................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  H  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  H  W  L  F 
                    Query_4821   181  AAGAACCACTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACATTATCGACATTGGTTATTT  270
V  94.8% (238/251)  IGHV4-39*01  229  ........G..C........G....G...T.......................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-16*02  25   -----------------------------------------------------------------------......-------------  30
J  97.7% (42/43)    IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4821   271  GACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  97.7% (42/43)    IGHJ4*02     9    .....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_308056

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD2-21*01                                                                                           14.1    8.6  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATTCC	TCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTCCTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFLQERVYYFDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_4822   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  95.1% (235/247)  IGHV4-31*03  50   .....TCC...A..............................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  Q  W  I  G  Y  I  Y  Y  S  G  S  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_4822   94   TGCAGTGGATTGGATACATCTATTACAGTGGGAGCACCTCCTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTTGACACGTCTA  183
V  95.1% (235/247)  IGHV4-31*03  140  ..G..........G.........................A.......................................A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  L  S  L  K  L  N  P  V  T  A  A  D  T  A  V  Y  F  C  A  R  S  S  L  F  L  Q  E  
                    Query_4822   184  AGAACCAGCTCTCCCTGAAGCTGAACCCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGTCTTCTCTATTCCTCCAAGAAA  273
V  95.1% (235/247)  IGHV4-31*03  230  ........T...............G.T..............................A.........-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-21*01  22   --------------------------------------------------------------------------.......---------  28

                                      T------------------>                                  
                                      R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4822   274  GAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (48/48)   IGHJ4*02     1    ------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_57301

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           304     9e-85
IGHD5-18*01                                                                                           12.2    31   
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	ACAGGGGCATCA	GGTTAC	GGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGGGCATCAGGTTACGGGTGGTTCGACCCC	TGASGYGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	15	9	0	62.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	102	12	0	89.5
Total	N/A	N/A	242	218	24	0	90.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  M  S  D  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4823   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGACTGACGATGAGTGATTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.1% (218/242)  IGHV3-33*03  47   ................................T.C..CT.C...AGC.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  L  K  K  F  Y  V  D  S  V  Q  G  R  F  T  I  S  R  D  D  S  
                    Query_4823   91   AGTGGGTGGCAGTTATATGGTATGATGGACTTAAAAAATTTTATGTAGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACGACTCCA  180
V  90.1% (218/242)  IGHV3-33*03  137  .............................AG...T....AC....C..........A..........................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  H  Y  Y  C  T  G  A  S  G  Y  G  W  F  
                    Query_4823   181  AGAATACCCTGTATCTGCAGATGGACAGCCTGAGAGCCGAGGACACGGCTCATTATTACTGTACAGGGGCATCAGGTTACGGGTGGTTCG  270
V  90.1% (218/242)  IGHV3-33*03  227  ....C..G...........A...A..........................GTG.........----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (6/6)     IGHD5-18*01  15   --------------------------------------------------------------------------......----------  20
J  97.8% (45/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4823   271  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  309
J  97.8% (45/46)    IGHJ5*02     13   ..................................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_57300

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           397     8e-113
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACAGACTAC	AALIAASHFTDY	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	72	2	0	97.3
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	103	11	0	90.4
CDR3-IMGT (germline)	291	293	3	3	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_4824   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCA  93
V  93.8% (272/290)  IGHV5-51*01  2    ..................................A...................................T...................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  V  P  G  Q  G  L  E  L  M  G  L  I  Y  P  G  D  S  D  T  W  Y  
                    Query_4824   94   CCTACTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCAAGGCCTGGAGTTGATGGGGCTCATCTATCCTGGTGACTCTGATACCTGGTACA  183
V  93.8% (272/290)  IGHV5-51*01  92   G.........................A........A............G.......A..........................A.A....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  T  S  A  Y  L  Q  W  T  T  L  K  A  S  D  
                    Query_4824   184  GTCCGTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCACCTCCGCCTACCTGCAGTGGACCACCCTGAAGGCCTCGGACA  273
V  93.8% (272/290)  IGHV5-51*01  182  .C......................C...................A...G.A..................G..G.................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4824   274  CCGCCATTTACTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACAGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  360
V  93.8% (272/290)  IGHV5-51*01  272  .......G..T.........-------------------------------------------------------------------  291
                                      T  A  M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    -------------------------...A.....-----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -----------------------------------------------.................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_57303

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           316     2e-88
IGHD6-13*01                                                                                           12.2    32   
IGHJ2*01                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD6-13*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTGGCCCAGTTT	CTGGTA	ATCAAGAAC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGGCCCAGTTTCTGGTAATCAAGAACACTTCGATCTC	ATGPVSGNQEHFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	224	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  L  D  F  N  D  H  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_4825   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGACTCGACTTCAATGACCACTATATGAGTTGGATCCGCCAGGCTCCAGGTAAGGGGCTGG  90
V  91.1% (224/246)  IGHV3-11*06  47   ........................C.......T..AC.....G....T....C.....C....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  A  Y  L  S  S  S  D  T  Y  T  N  Y  A  D  S  V  M  G  R  F  S  I  S  R  D  H  A  
                    Query_4825   91   AGTGGATTGCATATCTTAGTAGTAGTGACACTTACACAAACTACGCAGACTCTGTGATGGGCCGATTCAGCATCTCCAGAGACCACGCCA  180
V  91.1% (224/246)  IGHV3-11*06  137  .....G..T....CA...........AGT.G..........................A...........C.............A......  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  T  G  P  V  S  G  N  Q  
                    Query_4825   181  AGAAGTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTGTATTACTGTGCGACTGGCCCAGTTTCTGGTAATCAAG  270
V  91.1% (224/246)  IGHV3-11*06  227  ....C...................................G.........................------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD6-13*01  15   ------------------------------------------------------------------------------......------  20

                                      ------------->                                
                                      E  H  F  D  L  W  G  R  G  T  L  V  T  V  S  S
                    Query_4825   271  AACACTTCGATCTCTGGGGCCGTGGAACCCTGGTCACTGTCTCCTC  316
J  97.7% (42/43)    IGHJ2*01     9    ---......................C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_57302

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           419     2e-119
IGHD6-13*01                                                                                           14.1    9.8   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	ARHRYLGPRQQATENDY	291	341	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	69	2	0	97.2
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	112	2	0	98.2
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	292	280	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  Q  G  S  G  Y  T  F  S  T  
                    Query_4826   7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTTCCACCT  96
V  95.9% (280/292)  IGHV5-51*01  5    ...........................................G..................A...............G....A...G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  V  I  Y  P  G  D  S  D  A  R  Y  S  
                    Query_4826   97   ACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGTTGGGAGTCATCTATCCTGGTGACTCTGATGCCAGATACAGCC  186
V  95.9% (280/292)  IGHV5-51*01  95   .........G.....................................A....GA.......................A............  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_4826   187  CGTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCG  276
V  95.9% (280/292)  IGHV5-51*01  185  .......................A...........................................C......................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><--------------------CDR3-IMGT-------------------->                         
                                      A  M  Y  Y  C  A  R  H  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  Y  W  G  Q  G  T  L  V  T  
                    Query_4826   277  CCATGTATTACTGTGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCACCG  366
V  95.9% (280/292)  IGHV5-51*01  275  ......................--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD6-13*01  8    ----------------------------------------.......-------------------------------------------  14
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------................................  39

                                               
                                      V  S  S  
                    Query_4826   367  TCTCCTCAG  375
J  100.0% (41/41)   IGHJ4*02     40   .........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_57305

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           367     6e-104
IGHD5-12*01                                                                                           14.1    8.9   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACGCGGGA	TGGCTAC	AATACCTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACGCGGGATGGCTACAATACCTATTGACTGC	ARGRGMATIPIDC	267	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	47	4	0	92.2
CDR2-IMGT	132	152	21	16	5	0	76.2
FR3-IMGT	153	266	114	109	5	0	95.6
CDR3-IMGT (germline)	267	273	7	7	0	0	100
Total	N/A	N/A	273	254	19	0	93


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  T  N  S  G  Y  Y  W  G  W  
                    Query_4827   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACCAATAGTGGTTACTACTGGGGCTGGA  90
V  93.0% (254/273)  IGHV4-61*08  26   ................T..........................................G...G..G.G..............A......  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  R  P  P  G  K  G  L  E  W  I  G  Y  T  H  Y  S  G  D  T  N  Y  N  P  S  L  K  S  R  
                    Query_4827   91   TCCGGCGGCCCCCAGGGAAGGGACTGGAATGGATTGGCTATACTCATTACAGTGGGGACACCAACTACAACCCCTCCCTCAAGAGTCGAG  180
V  93.0% (254/273)  IGHV4-61*08  116  ......A.....................G........G....TCT...........AG................................  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  I  I  S  V  D  T  S  K  N  L  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  
                    Query_4827   181  TCATCATATCAGTAGACACGTCCAAGAACCTGCTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGA  270
V  93.0% (254/273)  IGHV4-61*08  206  ...C..........................A.T.........A.......................................C.......  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      -----------CDR3-IMGT-------------->                                 
                                      R  G  R  G  M  A  T  I  P  I  D  C  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_4827   271  GAGGACGCGGGATGGCTACAATACCTATTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  338
V  93.0% (254/273)  IGHV4-61*08  296  ...-----------------------------------------------------------------  298
                                      R                                                                   
D  100.0% (7/7)     IGHD5-12*01  11   ------------.......-------------------------------------------------  17
J  97.6% (40/41)    IGHJ4*02     7    ---------------------------......A..................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_57304

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         346     2e-97
IGHD2-2*02                                                                                            35.3    4e-06
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	GGATATTGTAGTGGTATCAGGTGCTTTACC	GGGGTAG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGGATATTGTAGTGGTATCAGGTGCTTTACCGGGGTAGGGTTCGACCCC	AREGYCSGIRCFTGVGFDP	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	30	25	2	3	83.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	251	238	10	3	94.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  S  V  S  G  D  S  I  S  S  G     Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4828     1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGCAGTGGG---TACTCCTGGAGCTGGATCCGGCAGCCACCGGGGAAGGGC  87
V  94.8% (238/251)  IGHV4-30-2*01  49   ..................G............G...............TGGT.............................A.........  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  R  S 
                    Query_4828     88   CTGGAGTGGATTGGGTACATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCATTAGACAGGTCC  177
V  94.8% (238/251)  IGHV4-30-2*01  139  ..........................................................................A...G...........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                         T  N  Q  V  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  Y  C  S  G  I 
                    Query_4828     178  ACGAACCAGGTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTACTGTGCCAGAGAGGGATATTGTAGTGGTATC  267
V  94.8% (238/251)  IGHV4-30-2*01  229  .A.......T................C.............................T..............-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.7% (26/30)    IGHD2-2*02     2    ------------------------------------------------------------------------............A...C.  19

                                        3-IMGT----------------------->                                  
                                         R  C  F  T  G  V  G  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4828     268  AGGTGCTTTACCGGGGTAGGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  86.7% (26/30)    IGHD2-2*02     20   ..C....A....----------------------------------------------------  31
J  100.0% (45/45)   IGHJ5*02       7    -------------------.............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_57307

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_4829   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG..G.T..................................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_4829   91   TGGATTGGATATATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  93.4% (228/244)  IGHV4-59*01  139  ........G...................G.....A............................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W 
                    Query_4829   181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  97.1% (34/35)    IGHJ4*02     14   --------------------------------------------------------------------------------------....  17

                                                                     
                                       G  Q  G  T  L  A  T  V  S  S  
                    Query_4829   271  GGCCAGGGAACCCTGGCCACCGTCTCCTCAG  301
J  97.1% (34/35)    IGHJ4*02     18   ................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_57306

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD2-2*01                                                                                            10.3    117  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GA	ATGCC	CTTAAACCTTCATCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGCCCTTAAACCTTCATCCCTTTGACTCC	ARMPLNLHPFDS	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4830   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCACCTTTACCACCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.7% (233/246)  IGHV3-23*01  47   ......................A...................G..G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  A  G  S  G  S  G  P  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4830   91   AGTGGGTCTCAGCTATTGCTGGTAGTGGTAGTGGCCCATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.7% (233/246)  IGHV3-23*01  137  .................AG..........G..A..A......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  N  R  L  R  A  E  D  T  A  V  Y  F  C  A  R  M  P  L  N  L  H  P  
                    Query_4830   181  AGAACACGCTGTATCTGCAGATGAACCGCCTGAGAGCCGAGGACACGGCCGTATATTTTTGTGCGAGAATGCCCTTAAACCTTCATCCCT  270
V  94.7% (233/246)  IGHV3-23*01  227  ...................A......A..............................AC.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-2*01   27   --------------------------------------------------------------------.....-----------------  31
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4830   271  TTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.7% (43/44)    IGHJ4*02     7    ......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_280098

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            343     2e-96
IGHD2-15*01                                                                                           14.1    8.9  
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	CTTTGCCCAGAATCTTTTAC	GGTGGTGGCT	CCACTTTG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAAAGATCTTTGCCCAGAATCTTTTACGGTGGTGGCTCCACTTTGCTACTACGGCTTCGACTTC	TKDLCPESFTVVAPLCYYGFDF	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	251	9	8	1	0	88.9
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4831   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGGTTCACTTTTGATGACTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTAG  90
V  93.6% (235/251)  IGHV3-9*01   47   .....................C.........A.....C........T.........................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  N  W  N  S  H  S  L  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4831   91   AGTGGGTCGCAGGTATTAATTGGAATAGTCATAGTTTAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.6% (235/251)  IGHV3-9*01   137  ........T.........G..........GG...CA......................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  E  M  N  S  L  T  P  E  D  T  A  L  Y  Y  C  T  K  D  L  C  P  E  S  F  
                    Query_4831   181  AGAACTCCCTGTATCTGGAAATGAACAGTCTGACACCTGAGGACACGGCCTTATATTACTGTACAAAAGATCTTTGCCCAGAATCTTTTA  270
V  93.6% (235/251)  IGHV3-9*01   227  .................C...............G.G................G.........G........-------------------  297
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                      -CDR3-IMGT--------------------------->                              
                                      T  V  V  A  P  L  C  Y  Y  G  F  D  F  W  G  Q  G  T  T  V  T  V  S 
                    Query_4831   271  CGGTGGTGGCTCCACTTTGCTACTACGGCTTCGACTTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  338
D  90.0% (9/10)     IGHD2-15*01  14   -......A...---------------------------------------------------------  23
J  91.8% (45/49)    IGHJ6*02     11   -------------------.........TA.G...G................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_280099

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           353     9e-100
IGHD6-19*01                                                                                           18.0    0.59  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGCAGGA	AGTGGCTGG	CCCCGGGGTCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGCAGGAAGTGGCTGGCCCCGGGGTCATTTTGACTAC	ARVAGSGWPRGHFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4832   1    ACCCTGTCCCTCACCTGCACTGTCTCCGGTGGATCCGTCAGCAGTAGTAGTTACTATTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGA  90
V  95.2% (238/250)  IGHV4-61*01  49   ..........................T.....C............G..........C.......................A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  E  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S 
                    Query_4832   91   CTGGAGTGGATTGAGTATATCTATTACAGGGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCGTATCAGTCGACACGTCC  180
V  95.2% (238/250)  IGHV4-61*01  139  .............G...............T....G.....................................A.......A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  A  G  S  G  W  P 
                    Query_4832   181  AAGAACCAGTTCTCCCTGAAACTGAGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTAGCAGGAAGTGGCTGGCCC  270
V  95.2% (238/250)  IGHV4-61*01  229  ....................G.....C...........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD6-19*01  10   ------------------------------------------------------------------------------.........---  18

                                      ----------------->                                
                                       R  G  H  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S
                    Query_4832   271  CGGGGTCATTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTC  320
J  97.6% (40/41)    IGHJ4*02     6    ---------......................C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_280092

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           382     3e-108
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTA	ACGATTT	ACATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACGATTTACATTATGGTATGGACGTC	ARVNDLHYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4833   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATTCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (247/250)  IGHV4-31*01  49   ...................C................................................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 
                    Query_4833   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (247/250)  IGHV4-31*01  139  ..........................................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  D  L  H  Y  G 
                    Query_4833   181  AAGAACCAGCTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTTAACGATTTACATTATGGT  270
V  98.8% (247/250)  IGHV4-31*01  229  .........T............................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   6    -------------------------------------------------------------------------.......----------  12
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4833   271  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  312
J  100.0% (45/45)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_280093

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD2-21*02                                                                                           16.1    2.5   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TTTG	GGTGATGACTG	GGATCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTTTGGGTGATGACTGGGATCAATACTACTTTGACTAC	ASLGDDWDQYYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	270	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  T  G  E  S  L  K  I  S  C  R  C  S  G  Y  R  F  T  N  Y
                    Query_4834   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGACCGGGGAGTCTCTGAAGATCTCCTGTAGGTGTTCTGGATACAGGTTTACCAATTA  90
V  93.8% (270/288)  IGHV5-51*01  6    ..................................C...........................A.G.............C.......GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  V  G  M  M  N  P  G  D  S  D  T  R  Y  S  P
                    Query_4834   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACGTGGGAATGATGAATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  93.8% (270/288)  IGHV5-51*01  96   ........G...................................GGA....G..C..CT...............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  G  Q  V  T  I  S  A  D  E  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_4834   181  GCCCTTCCAAGGCCAGGTCACCATCTCAGCCGACGAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  93.8% (270/288)  IGHV5-51*01  186  .T................................A..........C...........................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  S  L  G  D  D  W  D  Q  Y  Y  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_4834   271  CATGTATTACTGTGCGAGTTTGGGTGATGACTGGGATCAATACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  359
V  93.8% (270/288)  IGHV5-51*01  276  ..................-----------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                          
D  90.9% (10/11)    IGHD2-21*02  11   ----------------------....G......--------------------------------------------------------  21
J  97.9% (47/48)    IGHJ4*02     1    -----------------------------------------...................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_280090

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            367     5e-104
IGHD1-1*01                                                                                            10.3    115   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	TACAA	TA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTACAATAACTTTGACTAC	ARGYNNFDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	27	0	0	100
FR2-IMGT	57	107	51	51	0	0	100
CDR2-IMGT	108	128	21	21	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                     <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                        S  L  R  L  S  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_4835  1    GGTCCCTGAGACTCTCCTGCGCTGTGTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  97.2% (242/249)  IGHV4-4*01  47   ..A.....TCC...A..........C................................................................  136
                                        T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                     ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                     L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  
                    Query_4835  91   TGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCA  180
V  97.2% (242/249)  IGHV4-4*01  137  ..........................................................................................  226
                                     L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                     -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                     K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  N  N  F  D  Y  
                    Query_4835  181  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTACAATAACTTTGACTACT  270
V  97.2% (242/249)  IGHV4-4*01  227  .........................................................G...........---------------------  295
                                     K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                       
D  100.0% (5/5)     IGHD1-1*01  3    -----------------------------------------------------------------------.....--------------  7
J  100.0% (45/45)   IGHJ4*02    4    ------------------------------------------------------------------------------............  15

                                                                      
                                     W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4835  271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (45/45)   IGHJ4*02    16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_280091

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           311     5e-87
IGHD6-13*01                                                                                           18.0    0.62 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTGGT	CAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTGGTCAGCAGCTGACTGACTAC	ARDSGQQLTDY	276	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	275	147	111	3	33	75.5
CDR3-IMGT (germline)	276	283	8	8	0	0	100
Total	N/A	N/A	283	243	7	33	85.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_4836   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  85.9% (243/283)  IGHV3-21*01  47   ..............................................C..................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  R  H  I  Y  Y  G  Y  S  V  K  G  R  F  T  Y  Y  A  D  S  V  
                    Query_4836   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTCGTCACATATATTATGGATACTCAGTGAAGGGCCGATTCACCTATTACGCAGACTCAGTGA  180
V  85.9% (243/283)  IGHV3-21*01  137  .............................A..T.....---------------------------------..C................  193
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I                                   Y  Y  A  D  S  V  

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                      K  G  R  F  T  I  S  R  D  D  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  
                    Query_4836   181  AGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATT  270
V  85.9% (243/283)  IGHV3-21*01  194  ..........................A..........................................................G....  283
                                      K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-----------CDR3-IMGT----------->                                  
                                      Y  C  A  R  D  S  G  Q  Q  L  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4836   271  ACTGTGCGAGAGATTCTGGTCAGCAGCTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
V  85.9% (243/283)  IGHV3-21*01  284  .............-----------------------------------------------------------  296
                                      Y  C  A  R                                                              
D  100.0% (9/9)     IGHD6-13*01  9    --------------------.........-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_280096

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           296     2e-82
IGHD3-10*01                                                                                           10.3    123  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAG	TGCTTTC	GGTTC	TGG	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGTGCTTTCGGTTCTGGACTATTACTTCGGCTTGGACGTC	TRVLSVLDYYFGLDV	249	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	134	30	22	8	0	73.3
FR3-IMGT	135	248	114	101	13	0	88.6
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	222	33	0	87.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  T  S  G  F  S  F  R  D  Y  V  M  S  W  V  R  Q  A  P  G  K  G  P  
                    Query_4837   1    GGTCCCTGAGACTCTCCTGTACGACTTCTGGGTTCAGCTTTCGTGATTATGTTATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGACCGG  90
V  87.1% (222/255)  IGHV3-49*04  47   ......................AG.......A....C....G.........C......C..........................G.T..  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  N  I  R  T  R  G  Y  G  A  A  T  D  Y  A  A  S  V  K  G  R  F  S  I  S  R  D  
                    Query_4837   91   AGTGGGTAGGAAACATTAGGACAAGAGGTTATGGTGCGGCCACAGACTACGCCGCGTCTGTGAAAGGCAGATTCTCCATCTCAAGAGATG  180
V  87.1% (222/255)  IGHV3-49*04  137  ..........TTT......A.GC.A..C........G.A.A.....A...........................A...............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------------CDR3
                                      D  S  E  G  M  A  Y  L  E  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  V  L  S  V  L  
                    Query_4837   181  ATTCCGAAGGTATGGCCTACTTGGAAATGAACAGCCTGAAGACCGAGGACACAGCCGTTTACTATTGTACTAGAGTGCTTTCGGTTCTGG  270
V  87.1% (222/255)  IGHV3-49*04  227  .....A..A.C..C.....TC..C................A.................G..T..C..........---------------  301
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (5/5)     IGHD3-10*01  11   ----------------------------------------------------------------------------------.....---  15

                                      -IMGT----------------->                                 
                                      D  Y  Y  F  G  L  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_4837   271  ACTATTACTTCGGCTTGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  326
J  91.1% (51/56)    IGHJ6*02     7    ....C....A...TA..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_280097

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         360     1e-101
IGHD5-18*01                                                                                           14.1    8.6   
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GAAG	ACAGATATGG	GGGACTTTGGACCTGCAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAAGACAGATATGGGGGACTTTGGACCTGCATTACTTTGACTTC	ARGRQIWGTLDLHYFDF	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4838     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  F  Y  N  T  E  T  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  D  R  S 
                    Query_4838     91   CTGGAGTGGATTGGATACTTCTATAATACTGAGACCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCACTAGACAGGTCC  180
V  96.0% (240/250)  IGHV4-30-2*01  139  ..............G...A.....C...G..G..G.......................A...................G...........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  Q  I  W  G  T 
                    Query_4838     181  AAGAACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAAGACAGATATGGGGGACT  270
V  96.0% (240/250)  IGHV4-30-2*01  229  ...................A......C...........................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD5-18*01    7    --------------------------------------------------------------------------....C.....------  16

                                        MGT-------------------->                                  
                                         L  D  L  H  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4838     271  TTGGACCTGCATTACTTTGACTTCTGGGGCCAGGGCACCCTCGTCACCGTCTCCTCAG  328
J  93.5% (43/46)    IGHJ4*02       3    ------------..........A............A.....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_280094

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           308     4e-86
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	220	23	0	90.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E  
                    Query_4839   4    CCCTGAGACTCTCCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAAT  93
V  90.5% (220/243)  IGHV4-59*08  50   .....TCC...A.....A............G......C.G..G................A....G.......................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N  
                    Query_4839   94   GGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAACC  183
V  90.5% (220/243)  IGHV4-59*08  140  ......G.........T.....T.....CA.....T...................T........CA........................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M  
                    Query_4839   184  AGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATGG  273
V  90.5% (220/243)  IGHV4-59*08  230  ..............C...............................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (5/5)     IGHD2-21*02  17   ------------------------------------------------------------------------.....-------------  21
J  92.0% (46/50)    IGHJ6*02     13   ------------------------------------------------------------------------------.......T....  24

                                      ---->                                 
                                      A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_4839   274  CCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  311
J  92.0% (46/50)    IGHJ6*02     25   A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_280095

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           341     5e-96
IGHD2-8*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGCGGGGGGTTTATCATGA	TAATGGTG	GCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGCGGGGGGTTTATCATGATAATGGTGGCCTTGACTTC	ARRRGVYHDNGGLDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  Y  Y  W  N  W  I  R  Q  T  P  G  K  G  P  E 
                    Query_4840   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTACTACTGGAACTGGATCCGACAGACCCCAGGGAAGGGACCTGAG  90
V  94.7% (231/244)  IGHV4-59*08  49   .......................................A...............G.........G...C...............TG...  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  R  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_4840   91   TGGATTGGGTATATCTATTCCAGGGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAAC  180
V  94.7% (231/244)  IGHV4-59*08  139  ...................A...T..................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  N  L  L  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  R  G  V  Y  H  D  N  G 
                    Query_4840   181  CAGTTCTCCCTGAACCTGCTCTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGAGACGGCGGGGGGTTTATCATGATAATGGT  270
V  94.7% (231/244)  IGHV4-59*08  229  ..............G...AG.................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD2-8*01   13   -----------------------------------------------------------------------------------.......  19

                                      ----------->                                  
                                       G  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4840   271  GGCCTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTTTCCTCAG  316
D  100.0% (8/8)     IGHD2-8*01   20   .---------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    ----......A...........................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_330926

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_4841   1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  87.0% (214/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_4841   91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCACCATCTCAGTAGACAAGTCCAAG  180
V  87.0% (214/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A................A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_4841   181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  87.0% (214/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_4841   271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_330927

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD2-15*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGT	GGATATTGTAGTGG	CTTTGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTGGATATTGTAGTGGCTTTGGTTGACTCC	AKDVDIVVALVDS	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4842   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAATTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-23*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  L  T  T  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  Q  S  
                    Query_4842   91   AGTGGGTCTCAGGTATTAGTGGTAGTGGTCTTACCACATACTACGCAGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACCAATCCA  180
V  94.8% (237/250)  IGHV3-23*01  137  ............C................GG..G......................A.......G..................A.T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  V  D  I  V  V  A  
                    Query_4842   181  AGAACACCCTGTATCTGCAAATGAGCAGCCTGAGGGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATGTGGATATTGTAGTGGCTT  270
V  94.8% (237/250)  IGHV3-23*01  227  .......G................A.........A...................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (14/14)   IGHD2-15*01  2    -------------------------------------------------------------------------..............---  15

                                      ---------->                                  
                                      L  V  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4842   271  TGGTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ4*02     7    ---......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_247284

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           318     6e-89
IGHD4-17*01                                                                                           21.8    0.041
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCC	CTACGGTGACT	GCGTGGGGT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCCTACGGTGACTGCGTGGGGTAACTGGTTCGACCCC	ARGPTVTAWGNWFDP	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  N  F  Y  W  S  W  I  R  Q  F  P  G  K  G  
                    Query_4843   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTGGTAATTTCTACTGGAGCTGGATCCGCCAGTTCCCAGGGAAGGGCC  93
V  91.1% (225/247)  IGHV4-31*02  50   .....TCC...A...................................GG..A......................CA..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  S  Y  S  G  S  A  Y  S  K  P  S  L  E  S  R  V  T  I  S  L  D  T  S  
                    Query_4843   94   TGGAGTGGATTGGGTACATCTCTTACAGTGGGAGCGCCTACTCTAAGCCGTCCCTCGAGAGTCGAGTGACCATTTCACTGGACACGTCTA  183
V  91.1% (225/247)  IGHV4-31*02  140  .....................A.............A......AC..C.........A..........T.....A...G.A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  M  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  T  V  T  A  W  
                    Query_4843   184  AGAACCAGTTCTCCCTGAAGATGAACTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGGGGCCCTACGGTGACTGCGTGGG  273
V  91.1% (225/247)  IGHV4-31*02  230  ....................C...G...........................G..............-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD4-17*01  4    ------------------------------------------------------------------------...........-------  14

                                      ---------------->                                  
                                      G  N  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_4843   274  GTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  324
J  98.0% (48/49)    IGHJ5*02     3    --.....................................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_247285

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-9*01                                                                                            14.1    8.3  
IGHJ2*01                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTACGC	TTTTGAC	GGCA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTACGCTTTTGACGGCAACTGGTACTTCGATCTC	AREYAFDGNWYFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4844   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGCCATGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ...............................................T...................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  T  T  G  G  S  T  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_4844   91   AGTGGGTTTCAGCTATTACTACTACTGGTGGTAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  .......C..........G.GG..G.............T................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  M  E  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  Y  A  F  D  G  N  
                    Query_4844   181  AGAACACGTTGTCTATGGAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAGAGAGTACGCTTTTGACGGCAACT  270
V  94.0% (235/250)  IGHV3-23*01  227  ........C...A.C..C......................G.........................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-9*01   12   ----------------------------------------------------------------------------.......-------  18
J  100.0% (51/51)   IGHJ2*01     3    ---------------------------------------------------------------------------------------...  5

                                      ------------->                                  
                                      W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4844   271  GGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  318
J  100.0% (51/51)   IGHJ2*01     6    ................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_330922

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_4845   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_4845   91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_4845   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_4845   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_330923

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           333     1e-93
IGHD2-15*01                                                                                           33.4    2e-05
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATGAAA	GATATTGTAGTGAAGGTAGTTGCTAC	CCTACA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTACCCTACATACTTTGACTTC	ARYERYCSEGSCYPTYFDF	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	95	19	0	83.3
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	251	38	0	86.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  K  I  S  C  K  T  S  G  Y  S  F  S  N  Y
                    Query_4846   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAAAAGCCCGGGCAGTCTCTAAAGATCTCCTGTAAGACTTCTGGATACAGTTTCAGCAACTA  90
V  86.9% (251/289)  IGHV5-51*01  6    .....................A..................G.......G...............GG............C..T.C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  S  G  E  G  L  E  W  M  G  I  I  Y  A  G  D  S  D  I  T  Y  S  P
                    Query_4846   91   TTGGATCGGCTGGGTGCGCCAGATGTCCGGTGAAGGCCTGGAGTGGATGGGAATCATCTATGCTGGCGACTCTGACATTACATATAGTCC  180
V  86.9% (251/289)  IGHV5-51*01  96   C........................C....GA...................G.........C....T........T.CC.G...C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  R  A  T  I  S  V  D  K  A  I  D  T  A  Y  V  Q  W  S  V  L  K  A  S  D  T  A
                    Query_4846   181  GTCCTTTGAGGGCCGGGCCACCATCTCAGTCGACAAGGCCATCGACACCGCCTACGTACAGTGGAGCGTTCTGAAGGCCTCGGACACCGC  270
V  86.9% (251/289)  IGHV5-51*01  186  ......CC.A....A..T...........C.......T.....AG..........C.G.........AGC....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        T  Y  Y  C  A  R  Y  E  R  Y  C  S  E  G  S  C  Y  P  T  Y  F  D  F  W  G  Q  G  T  P  V
                    Query_4846   271  CACATATTACTGTGCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTACCCTACATACTTTGACTTCTGGGGCCAGGGAACCCCGGT  360
V  86.9% (251/289)  IGHV5-51*01  276  ..TG...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  88.5% (23/26)    IGHD2-15*01  3    --------------------------............GT.....C......--------------------------------------  28
J  95.7% (44/46)    IGHJ4*02     3    ----------------------------------------------------------..........A.................T...  34

                                                    
                                        T  V  S  S  
                    Query_4846   361  CACCGTCTCCTCAG  374
J  95.7% (44/46)    IGHJ4*02     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_247280

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         339     2e-95
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	N/A	N/A	TCACCTGCCAACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGATCACCTGCCAACCCCTACTACCACGCTCTGGACGTC	ARSPANPYYHALDV	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  V  Y  I  S  N  G  G  Y  S  W  T  W  I  R  Q  P  P  G  R  G 
                    Query_4847     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTACATCAGCAATGGTGGTTACTCCTGGACCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  93.6% (233/249)  IGHV4-30-2*01  49   ..................G............G..C........G.................G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Q  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  R  S 
                    Query_4847     91   CTGGAGTGGATTGGGTACATCTATCAAAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGCGTCACCATATCGGTAGACAGGTCC  180
V  93.6% (233/249)  IGHV4-30-2*01  139  ..........................T...............................A......A...........A............  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  V  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  A  N  P  Y  Y 
                    Query_4847     181  AAGAACCAGTTCTCCGTTAACTTGAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGATCACCTGCCAACCCCTACTAC  270
V  93.6% (233/249)  IGHV4-30-2*01  229  ...............C.G..GC....C..........................G...............---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  92.7% (51/55)    IGHJ6*02       8    -----------------------------------------------------------------------------------.......  14

                                        -------------->                                 
                                         H  A  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4847     271  CACGCTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  318
J  92.7% (51/55)    IGHJ6*02       15   T...G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_28014

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           363     1e-102
IGHD6-13*01                                                                                           16.1    2.2   
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-13*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGAA	CAGCGGCTGGT	GGCTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGAACAGCGGCTGGTGGCTTCTGGTACCTCGATCTC	AKDGTAAGGFWYLDL	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  T  P  D  K  G  L  
                    Query_4848   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGACTCCAGACAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-30*18  47   .......................................................................G......G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  S  D  G  S  G  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4848   91   AGTGGGTGGCAGTTATATCATCTGATGGAAGTGGTAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.4% (241/250)  IGHV3-30*18  137  .....................A..........AA........................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  I  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  G  T  A  A  G  G  
                    Query_4848   181  AGAACACAATTTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTCTGTATTACTGTGCGAAAGATGGAACAGCGGCTGGTGGCT  270
V  96.4% (241/250)  IGHV3-30*18  227  .......GC.G.......................................G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.9% (10/11)    IGHD6-13*01  9    ---------------------------------------------------------------------------....A......----  19

                                      ---------------->                                  
                                      F  W  Y  L  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4848   271  TCTGGTACCTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  321
J  98.0% (49/50)    IGHJ2*01     4    -.......T..........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_84819

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           283     1e-78
IGHD3-16*02                                                                                           14.1    8.6  
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGACGCT	GGAGTAATCG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGACGCTGGAGTAATCGACTACTACGGTATGGACGTC	AREDAGVIDYYGMDV	250	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	135	27	18	3	6	66.7
FR3-IMGT	136	249	114	93	21	0	81.6
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	221	30	6	86


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  S  Y  Y  W  T  W  I  R  Q  R  P  G  K  G 
                    Query_4849   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGTGGTTCTTACTACTGGACGTGGATCCGCCAGCGCCCAGGGAAGGGC  90
V  86.0% (221/257)  IGHV4-31*03  49   ...............................G................GG...........GC.............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  N  N  R  G  S  P  D  F  N  P  S  L  M  G  R  T  V  I  S  L  D 
                    Query_4849   91   CTGGAGTGGATTGGGTACATCTATAACAATAATAGAGGGAGCCCCGACTTCAATCCGTCCCTCATGGGTCGGACTGTCATCTCTCTAGAC  180
V  86.0% (221/257)  IGHV4-31*03  139  ........................T..------..T......A..T...A...C..........A.A....AGT.AC...A..AG.....  222
                                       L  E  W  I  G  Y  I  Y  Y        S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-----------------CDR
                                       T  S  N  N  L  S  Y  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  E  D  A  G  V 
                    Query_4849   181  ACTTCTAATAACCTGTCCTACCTGAGGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGAGGACGCTGGAGTA  270
V  86.0% (221/257)  IGHV4-31*03  223  ..G.....G....A..T..C.....A.....G................................A............-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  90.0% (9/10)     IGHD3-16*02  21   ------------------------------------------------------------------------------------.....T  26

                                      3-IMGT----------------->                                 
                                       I  D  Y  Y  G  M  D  V  W  G  Q  G  I  T  V  T  V  S  S 
                    Query_4849   271  ATCGACTACTACGGTATGGACGTCTGGGGCCAAGGGATCACGGTCACCGTCTCCTCA  327
D  90.0% (9/10)     IGHD3-16*02  27   ....-----------------------------------------------------  30
J  98.1% (52/53)    IGHJ6*02     10   ----.................................C...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_299010

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           363     1e-102
IGHD3-10*01                                                                                           10.3    123   
IGHJ2*01                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CG	GGTTC	CATCTGTCCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGACGGGTTCCATCTGTCCCCCTACTGGTACTTCGATCTC	ARDGFHLSPYWYFDL	249	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	256	8	5	3	0	62.5
Total	N/A	N/A	256	244	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4850   1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCACCTTTGGTGATTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  95.3% (244/256)  IGHV3-49*04  47   .........................T..........................T................................G....  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  T  Y  G  G  T  A  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_4850   91   AGTGGGTAGGTTTCATTAGAAGCAAGACTTATGGTGGGACAGCAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  95.3% (244/256)  IGHV3-49*04  137  .........................AG..............A................................................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------------CDR3
                                      D  S  K  S  I  A  F  L  R  M  D  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  D  G  F  H  L  
                    Query_4850   181  ATTCCAAAAGCATCGCCTTTCTGCGAATGGACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTGCCAGGGACGGGTTCCATCTGT  270
V  95.3% (244/256)  IGHV3-49*04  227  ..................A.....A....A......................................A.T..A..--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (5/5)     IGHD3-10*01  11   ------------------------------------------------------------------------------.....-------  15

                                      -IMGT----------------->                                  
                                      S  P  Y  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_4850   271  CCCCCTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCCTCAG  327
J  98.1% (52/53)    IGHJ2*01     1    ----........................................A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_28019

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           346     2e-97
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCG	TACGGTGGCTAC	ATGAGAC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCGTACGGTGGCTACATGAGACACTTTGACTAC	ARVPYGGYMRHFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  N  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4851   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACCTTCAATAACTATGAGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-48*03  47   ................................T.........G..GT.....A.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  I  S  Y  I  S  S  S  G  R  T  I  D  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_4851   91   AGTATATCTCATACATTAGTAGTAGTGGTAGAACCATAGACTACGCAGACTCTGTGAGGGGCCGCTTCACCATCTCCAGAGACAACGCCG  180
V  94.4% (235/249)  IGHV3-48*03  137  ...GGG.T.......................T......T..................A......A........................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  Y  G  G  Y  M  
                    Query_4851   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGTCCCGTACGGTGGCTACATGA  270
V  94.4% (235/249)  IGHV3-48*03  227  .....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD4-17*01  5    --------------------------------------------------------------------------.......A....----  16

                                      ------------->                                  
                                      R  H  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4851   271  GACACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  97.8% (44/45)    IGHJ4*02     4    ---........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_28018

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            366     2e-103
IGHD3-22*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTTTG	ACTATGATAGTCGTGGTTTTTAC	AGACGTTCTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTTTGACTATGATAGTCGTGGTTTTTACAGACGTTCTAACTACTTTGACTTC	ARGFDYDSRGFYRRSNYFDF	264	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	77	27	23	4	0	85.2
FR2-IMGT	78	128	51	51	0	0	100
CDR2-IMGT	129	149	21	21	0	0	100
FR3-IMGT	150	263	114	104	10	0	91.2
CDR3-IMGT (germline)	264	268	5	5	0	0	100
Total	N/A	N/A	268	251	17	0	93.7


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  I  T  C  T  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  
                    Query_4852   1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCATCACCTGCACTGTCTCTGGTGGCTCCATCACTACTAGTAATTGGTGGAGTTGGGTCC  90
V  93.7% (251/268)  IGHV4-4*02   26   ................T...............C........G.....................GC.G......C................  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  Q  Y  N  P  S  L  K  S  R  V  
                    Query_4852   91   GCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCCAGTACAACCCGTCACTCAAGAGTCGAGTCA  180
V  93.7% (251/268)  IGHV4-4*02   116  ...........................................................A.C...........C................  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  I  S  V  D  K  S  K  N  Q  I  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  
                    Query_4852   181  CGATATCAGTAGACAAGTCCAAGAACCAGATCTCCCTGAGGTTGAATTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGG  270
V  93.7% (251/268)  IGHV4-4*02   206  .C...........................T.........A.C...GC...............................A.........--  293
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A     

                                      -------------------CDR3-IMGT------------------------>                                  
                                      G  F  D  Y  D  S  R  G  F  Y  R  R  S  N  Y  F  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_4852   271  GCTTTGACTATGATAGTCGTGGTTTTTACAGACGTTCTAACTACTTTGACTTCTGGGGCCAGGGAACCCTGGTCGCTGTCTCCTCAG  357
D  91.3% (21/23)    IGHD3-22*01  6    ------...........A......A....----------------------------------------------------------  28
J  93.8% (45/48)    IGHJ4*02     1    ---------------------------------------............A......................A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_247288

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           410     1e-116
IGHD1-1*01                                                                                            14.1    9.6   
IGHJ2*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAC	GGAGGAGCGATG	GGTACAA	TTTTCTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACGGAGGAGCGATGGGTACAATTTTCTCGACTGGTATTTCGATCTC	AGRRSDGYNFLDWYFDL	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  P  L  K  I  S  C  K  A  S  G  H  S  F  T  N  Y
                    Query_4853   1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCCGGGGAGCCTCTGAAGATCTCCTGTAAGGCTTCTGGACACAGCTTTACCAACTA  90
V  95.2% (276/290)  IGHV5-51*01  6    .........................G.................T.....................G.......T............G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  I  Y  S  P
                    Query_4853   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGCAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCATATACAGCCC  180
V  95.2% (276/290)  IGHV5-51*01  96   ..............................G..................................G..............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  L  R  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  P  D  T  A
                    Query_4853   181  GTCCCTCCGAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGGGCAGCCTGAAGGCCCCGGACACCGC  270
V  95.2% (276/290)  IGHV5-51*01  186  ....T...A.......................................................A..............T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  A  G  R  R  S  D  G  Y  N  F  L  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V
                    Query_4853   271  CATATATTACTGTGCGGGACGGAGGAGCGATGGGTACAATTTTCTCGACTGGTATTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGT  360
V  95.2% (276/290)  IGHV5-51*01  276  ...G............A...----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD1-1*01   1    --------------------------------.......---------------------------------------------------  7
J  98.0% (50/51)    IGHJ2*01     3    -----------------------------------------------.......C...................................  45

                                              
                                        S  S  
                    Query_4853   361  CTCCTCAG  368
J  98.0% (50/51)    IGHJ2*01     46   ........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_247289

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            288     5e-80
IGHD1-26*01                                                                                           12.2    31   
IGHJ2*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD1-26*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATAAG	TACTAC	TTATAT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATATAAGTACTACTTATATCTGGTACTTCGATCGC	AKDISTTYIWYFDR	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	39	12	0	76.5
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  R  G  H  W  M  T  W  I  R  H  L  P  D  K  G  L  
                    Query_4854   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTCGTGGCCACTGGATGACTTGGATTCGCCACCTTCCAGATAAGGGGCTGC  90
V  86.8% (217/250)  IGHV3-7*03   47   ....................................C....A..A..T.T.......GC...G.C.....GGC.....GG.........G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  N  I  K  E  D  G  S  E  E  H  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4854   91   AGTGGGTGGCAAATATAAAGGAAGATGGAAGTGAAGAGCACTATGGTGACTCTGTGAAGGGCCGATTCACCATCTCCCGAGACAACGCCC  180
V  86.8% (217/250)  IGHV3-7*03   137  ..........C..C......C.............GA.AT......TG..............................A...........A  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      Q  N  S  L  F  L  Q  M  N  N  L  R  V  E  D  T  A  V  Y  Y  C  A  K  D  I  S  T  T  Y  I  
                    Query_4854   181  AGAACTCTCTGTTTTTGCAGATGAACAACCTGAGAGTCGAGGACACGGCCGTGTATTACTGTGCGAAAGATATAAGTACTACTTATATCT  270
V  86.8% (217/250)  IGHV3-7*03   227  .......A....A.C....A.......G........C.............................G...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-26*01  15   ----------------------------------------------------------------------------......--------  20
J  96.0% (48/50)    IGHJ2*01     4    ----------------------------------------------------------------------------------------..  5

                                      ------------->                                  
                                      W  Y  F  D  R  W  G  R  G  T  L  V  S  V  S  S  
                    Query_4854   271  GGTACTTCGATCGCTGGGGCCGTGGCACCCTGGTCTCTGTCTCCTCAG  318
J  96.0% (48/50)    IGHJ2*01     6    ............T......................A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_320310

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     1e-109
IGHD6-25*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTC	ARQSSAGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	269	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  R  S  S  G  Y  D  F  L  D  Y
                    Query_4855   1    GCAGCTGGTGCAGTCTGGAGCAGAGCTAAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGAGTTCTGGGTACGACTTTCTCGACTA  90
V  92.4% (269/291)  IGHV5-51*01  6    .........................G.G..A.....C.........................A.G.......A...AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_4855   91   CTGGATCGTCTGGGTGCGCCAAATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGTCC  180
V  92.4% (269/291)  IGHV5-51*01  96   ........G............G..........................................................G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  A
                    Query_4855   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGCGCAGTCTGAAGGCCTCGGACACCGC  270
V  92.4% (269/291)  IGHV5-51*01  186  .............................C...............C..................A....C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_4855   271  CAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  360
V  92.4% (269/291)  IGHV5-51*01  276  ..T..................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  100.0% (48/48)   IGHJ6*02     15   -------------------------------------------...............................................  61

                                       
                                       
                    Query_4855   361  A  361
J  100.0% (48/48)   IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_320311

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           380     9e-108
IGHJ3*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	247	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4856   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (247/251)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_4856   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (247/251)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D 
                    Query_4856   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGAT  270
V  98.4% (247/251)  IGHV4-31*03  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------------...T..T..T...  13

                                      -->                                  
                                       I  W  G  P  G  T  M  V  T  V  S  S  
                    Query_4856   271  ATCTGGGGCCCAGGGACAATGGTCACCGTGTCTTCAG  307
J  90.0% (45/50)    IGHJ3*02     14   ..........A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_320312

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           346     2e-97
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTATCGTTCGGGGACTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATCGTTCGGGGACTTATTTTGACTAC	ARGLYYYRSGTYFDY	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  N  W  I  R  Q  H  P  G  K  G  
                    Query_4857   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  94.4% (235/249)  IGHV4-31*02  50   .....TCC...A......................................T.........G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  T  R  I  T  I  S  V  D  T  S  
                    Query_4857   94   TGGAGTGGATTGGGCACATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGACTCGAATTACCATATCAGTAGACACCTCCA  183
V  94.4% (235/249)  IGHV4-31*02  140  ..............T..........C..................................G....G...................G..T.  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  R  S  
                    Query_4857   184  AGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCTATTACTATCGTTCGG  273
V  94.4% (235/249)  IGHV4-31*02  230  .........................C..........................G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (22/24)    IGHD3-10*01  2    --------------------------------------------------------------------------.........G......  17

                                      ---------------->                                  
                                      G  T  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4857   274  GGACTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  91.7% (22/24)    IGHD3-10*01  18   ...G....-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    --------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_108274

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           367     6e-104
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4858   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4858   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.2% (242/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_4858   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  97.2% (242/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_4858   271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_320314

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           386     1e-109
IGHD3-22*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTTTG	ACTATGATAGTAGTGGT	ACTTACCACGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTTGACTATGATAGTAGTGGTACTTACCACGTTTTTGACTAC	ARFDYDSSGTYHVFDY	261	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	23	1	0	95.8
FR2-IMGT	75	125	51	50	1	0	98
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	111	3	0	97.4
CDR3-IMGT (germline)	261	265	5	5	0	0	100
Total	N/A	N/A	265	256	9	0	96.6


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  I  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  Y  W  S  W  I  R  
                    Query_4859   1    CAGGACTGGTGAAGCCCTCGGAGATCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTCCTACTGGAGCTGGATCCGGC  90
V  96.6% (256/265)  IGHV4-59*01  26   ................T.......C............................................A....................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_4859   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGATATATCTATTACAGTGGCAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  96.6% (256/265)  IGHV4-59*01  116  ...............................G.................G..C.....................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  L  D  T  S  R  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  
                    Query_4859   181  TATCATTAGACACGTCCAGGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTTTG  270
V  96.6% (256/265)  IGHV4-59*01  206  .....G............A........................C.........................................-----  290
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A        

                                      ----------CDR3-IMGT------------------>                                  
                                      D  Y  D  S  S  G  T  Y  H  V  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4859   271  ACTATGATAGTAGTGGTACTTACCACGTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
D  100.0% (17/17)   IGHD3-22*01  6    .................-------------------------------------------------------  22
J  100.0% (43/43)   IGHJ4*02     6    -----------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_320315

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	74	0	0	100
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	286	7	0	97.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_4860   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCA  91
V  97.6% (286/293)  IGHV5-51*03  2    ..................................................................................C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_4860   92   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  181
V  97.6% (286/293)  IGHV5-51*03  92   G.........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_4860   182  GTCCGTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  97.6% (286/293)  IGHV5-51*03  182  .C..........................C....C....A..................A................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_4860   272  CCGCCATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  361
V  97.6% (286/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)   IGHD6-19*01  4    --------------------------------------...............-------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   --------------------------------------------------------..................................  45

                                         
                                      S  
                    Query_4860   362  CAG  364
J  100.0% (37/37)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_108271

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           285     4e-79
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ1*01                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD4-17*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGA	TACGGTGA	GGGGACTTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGATACGGTGAGGGGACTTAT	ARDRYGEGTY	235	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	11	1	0	91.7
CDR1-IMGT	25	48	24	17	7	0	70.8
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	120	21	18	3	0	85.7
FR3-IMGT	121	234	114	102	12	0	89.5
CDR3-IMGT (germline)	235	242	8	8	0	0	100
Total	N/A	N/A	230	206	24	0	89.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  L  V  A  S  S  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I 
                    Query_4861   13   TGTGCAGCTTCTGGCCTCGTGGCCAGTAGTAACTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATT  102
V  89.6% (206/230)  IGHV3-53*01  64   ........C.....GT..ACC.T......C..........G.................................................  153
                                       C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I 

                                      ---CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-----------
                                       Y  H  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q 
                    Query_4861   103  TACCACGGTGGTAGCACATATTACGCAGACTCCGTAAAGGGCCGATTCACCATCTCCAGAGACGACTCTAAGAATACACTGTATCTTCAA  192
V  89.6% (206/230)  IGHV3-53*01  154  ..TAG...............C..............G...........................A.T..C.....C..G............  243
                                       Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 

                                      -----------------------------------------><----------CDR3-IMGT--------->                  
                                       M  N  N  L  K  V  D  D  T  A  V  Y  Y  C  A  R  D  R  Y  G  E  G  T  Y  W  G  K  G  T  L 
                    Query_4861   193  ATGAACAACCTGAAAGTCGACGACACGGCCGTGTATTATTGTGCGAGAGATCGATACGGTGAGGGGACTTATTGGGGCAAGGGCACCCTG  282
V  89.6% (206/230)  IGHV3-53*01  244  .......G.....G..C...G.................C...........----------------------------------------  293
                                       M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                           
D  100.0% (8/8)     IGHD4-17*01  5    ------------------------------------------------------........----------------------------  12
J  94.1% (32/34)    IGHJ1*01     19   ------------------------------------------------------------------------......C...........  36

                                                      
                                       V  T  V  S  S  
                    Query_4861   283  GTCACCGTCTCGTCAG  298
J  94.1% (32/34)    IGHJ1*01     37   ...........C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_320317

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            321     6e-90
IGHD5-18*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TC	GTGGATTCAGCTATGG	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCGTGGATTCAGCTATGGTGACTAC	ASRGFSYGDY	241	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  T  N  N  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_4862   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCACTAATAATAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  91.8% (225/245)  IGHV4-4*02   49   ...............................G........GC.G..G.........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  A  E  I  Y  H  S  G  L  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  N 
                    Query_4862   91   GAGTGGATTGCAGAAATCTATCACAGTGGGTTAACCAAGTACAACCCCTCCCTCAAGAGTCGAGTCACTATATCAGTCGACAAGTCCAAC  180
V  91.8% (225/245)  IGHV4-4*02   139  ..........GG...........T......AGC.....C........G....................C........A...........G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------CDR3-IMGT--------->
                                       N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  G  F  S  Y  G  D  Y 
                    Query_4862   181  AACCAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGTCGTGGATTCAGCTATGGTGACTAC  270
V  91.8% (225/245)  IGHV4-4*02   229  ................A.C...G..........................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  93.8% (15/16)    IGHD5-18*01  1    -------------------------------------------------------------------......A.........-------  16
J  97.6% (40/41)    IGHJ4*02     8    -----------------------------------------------------------------------------------.......  14

                                                                        
                                       W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4862   271  TGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  304
J  97.6% (40/41)    IGHJ4*02     15   .............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_320318

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           388     4e-110
IGHD3-10*01                                                                                           18.0    0.59  
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTAT	CAATTAGACT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATCAATTAGACTACTACTTTGACTAC	ARGLYYYQLDYYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	249	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4863   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  99.6% (249/250)  IGHV4-31*03  49   .........................................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4863   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  99.6% (249/250)  IGHV4-31*03  139  ..........................................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  Q  L 
                    Query_4863   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCTCTATTACTATCAATTA  270
V  99.6% (249/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-10*01  2    ---------------------------------------------------------------------------.........------  10

                                      ----------------->                                  
                                       D  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4863   271  GACTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  100.0% (48/48)   IGHJ4*02     1    ----................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_320319

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           353     1e-99
IGHD6-13*01                                                                                           16.1    2.3  
IGHJ2*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-13*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAGGTCGGA	ATAGCGGCAGTTGG	AACCCC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAGGTCGGAATAGCGGCAGTTGGAACCCCCTGGTACTTCGATCTC	AKDKVGIAAVGTPWYFDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  F  A  F  S  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4864   1    GGTCCCTGAGACTCTCCTGTGAAGCCTTTGCATTCAGTTTCAGTAGCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTAG  90
V  95.2% (238/250)  IGHV3-30*18  47   .....................C.....C..G.....CC.............G....................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  T  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4864   91   AGTGGGTGGCAGTTATCTCATATGATGGAACTAAGAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (238/250)  IGHV3-30*18  137  ................A.............G...T.......................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  K  V  G  I  A  A  
                    Query_4864   181  AGAACACGGTGTATCTGCAAATGAACAGCCTGAGACCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATAAGGTCGGAATAGCGGCAG  270
V  95.2% (238/250)  IGHV3-30*18  227  ........C..........................G..................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  85.7% (12/14)    IGHD6-13*01  5    --------------------------------------------------------------------------------.....A....  14

                                      IMGT--------------------->                                  
                                      V  G  T  P  W  Y  F  D  L  W  G  R  G  P  L  V  S  V  S  S  
                    Query_4864   271  TTGGAACCCCCTGGTACTTCGATCTCTGGGGCCGTGGCCCCCTGGTCTCTGTCTCCTCAG  330
D  85.7% (12/14)    IGHD6-13*01  15   C...--------------------------------------------------------  18
J  96.0% (48/50)    IGHJ2*01     4    ----------............................A........A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_144644

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           327     9e-92
IGHD5-12*01                                                                                           12.2    31   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTA	CAATAGAG	GGCTAC	AAACCAAAAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTACAATAGAGGGCTACAAACCAAAACAC	TTIEGYKPKH	247	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	19	7	0	73.1
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	132	30	28	2	0	93.3
FR3-IMGT	133	246	114	107	7	0	93.9
CDR3-IMGT (germline)	247	250	4	4	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  R  T  S  G  F  I  F  G  D  Y  A  L  S  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_4865   2    CCCTGTCCCTCACCTGCAGAACTTCTGGATTCATCTTTGGTGACTATGCTTTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGGAGT  91
V  92.0% (229/249)  IGHV3-49*04  50   .....AGA...T....T.C.G............C.........T......A...............................G.......  139
                                         L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><----------CDR2-IMGT---------><------------------------------------------------
                                      W  V  G  F  I  R  G  K  A  Y  G  G  T  T  D  Y  A  A  S  V  R  G  R  F  T  V  S  R  D  D  
                    Query_4865   92   GGGTAGGTTTCATTCGAGGCAAAGCTTATGGTGGGACAACAGACTACGCCGCGTCTGTGAGAGGCAGATTCACCGTCTCAAGAGATGATT  181
V  92.0% (229/249)  IGHV3-49*04  140  ..............A..A.........................A................A.............A...............  229
                                      W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  D  

                                      ----FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-----
                                      S  E  S  I  A  Y  L  Q  M  N  T  L  K  T  E  D  T  G  V  Y  Y  C  T  T  I  E  G  Y  K  P  
                    Query_4865   182  CCGAAAGCATCGCCTATCTGCAAATGAACACCCTGAAAACCGAGGACACAGGCGTGTATTATTGTACTACAATAGAGGGCTACAAACCAA  271
V  92.0% (229/249)  IGHV3-49*04  230  ..A...........................G....................C.........C.......---------------------  298
                                      S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                       
D  100.0% (6/6)     IGHD5-12*01  12   -----------------------------------------------------------------------------......-------  17

                                      ---->                                  
                                      K  H  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_4865   272  AACACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  310
J  97.2% (35/36)    IGHJ4*02     13   ---..................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_108279

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           366     2e-103
IGHD1-1*01                                                                                            12.2    32    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTAC	AEEKRRVPRGTFHY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4866   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-23*01  47   ................................T.........G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  
                    Query_4866   91   AGTGGGTCTCAGCCATTAGTGGTGGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGA  180
V  96.8% (242/250)  IGHV3-23*01  137  .............T.........A......................................................G.........C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  
                    Query_4866   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGG  270
V  96.8% (242/250)  IGHV3-23*01  227  .................................................................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------------------------......------------  17

                                      ------------->                                  
                                      G  T  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4866   271  GAACCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (43/44)    IGHJ4*02     5    ----....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_235912

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	273	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_4867   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  94.8% (273/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_4867   91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  94.8% (273/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  R  K  A  S  D  T  A
                    Query_4867   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCGGAAGGCCTCGGACACCGC  270
V  94.8% (273/288)  IGHV5-51*01  186  ...............G.........................T.........................A...T..................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4867   271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  94.8% (273/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_21537

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD2-2*02                                                                                            12.2    32   
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCCGATTCGGCGCGTCCGGGGACCTG	TATACC	TAT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCCGATTCGGCGCGTCCGGGGACCTGTATACCTATTTCGACCCC	ARDLRFGASGDLYTYFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  A  T  Y  F  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_4868   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTGTCCATCGCTACTTACTTCTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................GC......AG..G.....A...................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  S  I  Y  Y  T  G  I  T  K  N  N  P  S  L  K  S  R  V  T  I  L  L  D  T  S  K  S 
                    Query_4868   91   TGGATTGCGTCTATCTATTACACTGGGATCACCAAGAATAACCCCTCCCTCAAGAGTCGAGTCACCATATTACTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  .......G..A...........G.....G......CT.C...............................C.G...............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  E  L  N  S  V  T  A  A  D  T  A  V  H  Y  C  A  R  D  L  R  F  G  A  S  G  D 
                    Query_4868   181  CAGTTCTCCCTGGAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTTCATTACTGTGCGAGAGATCTCCGATTCGGCGCGTCCGGGGAC  270
V  91.4% (224/245)  IGHV4-59*01  229  ............A......G...........................GT................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      -------------------->                                  
                                       L  Y  T  Y  F  D  P  W  G  Q  G  T  P  V  S  V  S  S  
                    Query_4868   271  CTGTATACCTATTTCGACCCCTGGGGCCAGGGAACCCCGGTCTCCGTCTCCTCAG  325
D  100.0% (6/6)     IGHD2-2*02   26   ---......----------------------------------------------  31
J  95.3% (41/43)    IGHJ5*02     9    ------------.........................T....A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_169967

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGCCGAAATC	GTATTACGACTTTTGGA	ATCCTTATTCTCGGCTCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCGAAATCGTATTACGACTTTTGGAATCCTTATTCTCGGCTCCTTCGACCCC	ARGGRNRITTFGILILGSFDP	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_4869   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGATCATTATTGGAGCTGGATCCGCCAGTCTCCAGGGAAGGGGCTGGAA  90
V  93.1% (228/245)  IGHV4-34*01  49   ...........................................G.T.C..C..................C.C.................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_4869   91   TGGATTGGGGAGATCAACCATAGTGGAAGCACCAACTACAACCCGTCTCTCAAGAGTCGAGTCACCATATCAGCGGACACGTCTAAGAAC  180
V  93.1% (228/245)  IGHV4-34*01  139  ...........A.....T.............................C.........................TA........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  K  L  I  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  G  R  N  R  I  T  T  F 
                    Query_4869   181  CAGTTCTCCCTGAAGCTGATCTCTGTGACCGCCGCAGACACGGCTGTATATTTCTGTGCGAGAGGGGGCCGAAATCGTATTACGACTTTT  270
V  93.1% (228/245)  IGHV4-34*01  229  ...................G...............G...........G....A............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  94.1% (16/17)    IGHD3-3*01   1    ----------------------------------------------------------------------------.........T....  14

                                      MGT-------------------------->                                  
                                       G  I  L  I  L  G  S  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_4869   271  GGAATCCTTATTCTCGGCTCCTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  334
D  94.1% (16/17)    IGHD3-3*01   15   ...-------------------------------------------------------------  17
J  97.7% (42/43)    IGHJ5*02     9    ---------------------.........................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_21535

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            353     9e-100
IGHD2-8*02                                                                                            19.9    0.15  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AAAGCGGGCTC	TACTGGTGGT	A	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAAAGCGGGCTCTACTGGTGGTAACTTTGACTAC	ARKAGSTGGNFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  I  F  T  H  Y  W  M  S  W  V  R  Q  A  P  G  K  W  L  
                    Query_4870  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTTACTCACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGTGGCTGG  90
V  95.6% (237/248)  IGHV3-7*03  47   ....................................CC....G.AG.....................................G......  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  D  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4870  91   AGTGGGTTGCCGACATAAAGCAGGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (237/248)  IGHV3-7*03  137  .......G...A..........A...................................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                     K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  K  A  G  S  T  G  G  
                    Query_4870  181  AGAACTCAGTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAAAAGCGGGCTCTACTGGTGGTA  270
V  95.6% (237/248)  IGHV3-7*03  227  ........C.G.........................................................----------------------  294
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD2-8*02  10   -------------------------------------------------------------------------------..........-  19

                                     ---------->                                  
                                     N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4870  271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (45/45)   IGHJ4*02    4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_169963

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           347     7e-98
IGHD4-17*01                                                                                           12.2    33   
IGHJ6*02                                                                                              104     1e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCTCGCGAAGGG	GACTAC	CCTAGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGCTCGCGAAGGGGACTACCCTAGGTACTACTACCACGGTATGGACGTC	ARDAREGDYPRYYYHGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4871   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTCGCTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-21*01  47   ............................................A......G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  T  F  I  Y  Y  S  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4871   91   AGTGGGTCTCATCCATTAGTAGCACTAGCACTTTCATATACTACTCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  94.4% (236/250)  IGHV3-21*01  137  ......................T.G...T.G..A..........G........G...................................A  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      E  N  S  L  H  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  R  D  A  R  E  G  D  Y  
                    Query_4871   181  AGAACTCTCTGCATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTTCTGTGCGAGAGATGCTCGCGAAGGGGACTACC  270
V  94.4% (236/250)  IGHV3-21*01  227  .......A...T........................C....................A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD4-17*01  2    -----------------------------------------------------------------------------------......-  7

                                      -IMGT----------------------->                                 
                                      P  R  Y  Y  Y  H  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4871   271  CTAGGTACTACTACCACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  98.2% (56/57)    IGHJ6*02     6    -----.........T...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_21531

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           455     3e-130
IGHD6-13*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAC	ATAGCAGCAGCTGGT	CGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTAC	ARSHSSSWSGFDY	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	73	1	0	98.6
CDR1-IMGT	79	102	24	24	0	0	100
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	114	0	0	100
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	292	1	0	99.7


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_4872   5    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  94
V  99.7% (292/293)  IGHV5-51*03  2    ....G.....................................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_4872   95   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  184
V  99.7% (292/293)  IGHV5-51*03  92   ..........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_4872   185  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  99.7% (292/293)  IGHV5-51*03  182  ..........................................................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  A  M  Y  Y  C  A  R  S  H  S  S  S  W  S  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4872   275  CCGCCATGTATTACTGTGCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  364
V  99.7% (292/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)   IGHD6-13*01  5    ---------------------------...............------------------------------------------------  19
J  100.0% (44/44)   IGHJ4*02     5    ----------------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_21530

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            357     1e-100
IGHD6-13*01                                                                                           12.2    33    
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCAC	TACACAGACAACCTTTG	GCAGCA	ACTTCTTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACTACACAGACAACCTTTGGCAGCAACTTCTTTC	ALHRQPLAATSF	263	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	46	5	0	90.2
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	106	8	0	93
CDR3-IMGT (germline)	263	266	4	4	0	0	100
Total	N/A	N/A	266	247	19	0	92.9


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  R  S  T  G  V  G  V  E  W  I  R
                    Query_4873   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGCTTCTCACTCAGAAGTACTGGAGTGGGTGTAGAGTGGATCCG  90
V  92.9% (247/266)  IGHV2-5*01   30   ................................................G...........C.C..G............G.GC........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  E  D  E  R  Y  S  P  S  L  K  N  R  L  T
                    Query_4873   91   TCAGCCCCCCGGAAAGGCCCTAGAGTGGCTTGCACTCATTTATTGGAATGAAGATGAGCGCTACAGCCCTTCTCTGAAGAACAGACTCAC  180
V  92.9% (247/266)  IGHV2-5*01   120  .........A...........G.............................T...A.............A..........G...G.....  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  T  K  D  T  S  R  N  Q  V  V  L  T  M  T  D  M  D  P  V  D  T  A  T  Y  F  C  A  L  H
                    Query_4873   181  CATCACCAAGGACACCTCCAGAAACCAGGTGGTCCTAACAATGACCGACATGGACCCTGTGGACACGGCCACATATTTCTGTGCACTACA  270
V  92.9% (247/266)  IGHV2-5*01   210  ....................A...............T.........A...................A..........A........----  295
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A      

                                      ------CDR3-IMGT------------>                                  
                                        R  Q  P  L  A  A  T  S  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4873   271  CAGACAACCTTTGGCAGCAACTTCTTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  332
D  100.0% (6/6)     IGHD6-13*01  8    -------------......-------------------------------------------  13
J  100.0% (35/35)   IGHJ4*02     14   ---------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_235910

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           286     1e-79
IGHD1-26*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-26*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCCA	AAACCAGAAGG	GGGAGCT	TCGAG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAACCAGAAGGGGGAGCTTCGAGATGGACGTC	AKTRRGSFEMDV	247	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	10	27	18	14	4	0	77.8
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	132	30	27	3	0	90
FR3-IMGT	133	246	114	101	13	0	88.6
CDR3-IMGT (germline)	247	250	4	3	1	0	75
Total	N/A	N/A	241	212	29	0	88


Alignments

                                      <----FR1-IMGT----><-------CDR1-IMGT------><--------------------FR2-IMGT-------------------
                                       L  T  C  T  A  S  S  F  T  F  S  D  A  *  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G 
                    Query_4874   10   CTCACCTGCACAGCCTCCTCGTTCACTTTCAGTGACGCCTAGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAATGGGTGGGC  99
V  88.0% (212/241)  IGHV3-15*01  58   ...T....TG.......TGGA............A......G......C................................G.....T...  147
                                       L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G 

                                      --><----------CDR2-IMGT---------><----------------------------------------------------FR3-
                                       R  I  K  S  K  V  D  G  G  T  T  D  C  A  A  P  V  E  G  R  L  T  I  S  R  D  D  S  K  N 
                    Query_4874   100  CGTATTAAAAGTAAAGTTGATGGTGGGACAACAGACTGTGCTGCACCCGTGGAAGGCAGATTAACCATCTCAAGAGATGATTCGAAAAAC  189
V  88.0% (212/241)  IGHV3-15*01  148  ...........C...AC....................AC............A..........C....................A......  237
                                       R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       T  V  Y  L  Q  V  R  N  L  K  T  E  D  T  A  V  Y  Y  C  A  K  T  R  R  G  S  F  E  M  D 
                    Query_4874   190  ACGGTGTATCTACAAGTGAGAAACCTGAAGACCGAGGACACAGCCGTCTATTACTGTGCCAAAACCAGAAGGGGGAGCTTCGAGATGGAC  279
V  88.0% (212/241)  IGHV3-15*01  238  ...C.......G...A...AC.G......A.................G.........A...-----------------------------  298
                                       T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                               
D  100.0% (7/7)     IGHD1-26*01  9    ------------------------------------------------------------------------.......-----------  15
J  100.0% (42/42)   IGHJ6*02     21   ------------------------------------------------------------------------------------......  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4874   280  GTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  315
J  100.0% (42/42)   IGHJ6*02     27   ....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_169968

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           300     8e-84
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	T	AGTGGCTGG	GACCACGTCTCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAGTGGCTGGGACCACGTCTCT	AKDSGWDHVS	245	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	10	1	0	90.9
CDR1-IMGT	26	49	24	20	4	0	83.3
FR2-IMGT	50	100	51	49	2	0	96.1
CDR2-IMGT	101	130	30	21	3	6	70
FR3-IMGT	131	244	114	109	5	0	95.6
CDR3-IMGT (germline)	245	252	8	8	0	0	100
Total	N/A	N/A	238	217	15	6	91.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  N  T  Y  G  M  S  W  V  R  *  A  P  G  K  G  L  E  W  V  S  G  I  
                    Query_4875   15   GTGCAGCCTCCGGATTCACATTTAACACCTATGGCATGAGCTGGGTCCGCTAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGGTATCA  104
V  91.2% (217/238)  IGHV3-23*01  65   ..........T........C....G..G.....C................C.................................C...T.  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      -------CDR2-IMGT---------><----------------------------------------------------FR3-IMGT---
                                      S  S  S  D  G  G  G  R  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  A  K  N  T  L  
                    Query_4875   105  GTAGTAGTGATGGTGGTGGTCGCACAGACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACATTGCCAAGAACACACTGT  194
V  91.2% (217/238)  IGHV3-23*01  155  ..G......------.....A.....T.............................................A.T..........G....  238
                                      S  G  S        G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  

                                      -------------------------------------------------><----------CDR3-IMGT--------->          
                                      Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  S  G  W  D  H  V  S  W  G  Q  
                    Query_4875   195  ATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAAAGATAGTGGCTGGGACCACGTCTCTTGGGGCCAGG  284
V  91.2% (217/238)  IGHV3-23*01  239  ............................G.............................--------------------------------  296
                                      Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                   
D  100.0% (9/9)     IGHD6-19*01  10   -----------------------------------------------------------.........----------------------  18
J  97.1% (33/34)    IGHJ4*02     15   --------------------------------------------------------------------------------..........  24

                                                              
                                      G  T  L  V  T  V  S  S  
                    Query_4875   285  GAACCTTGGTCACCGTCTCCTCAG  308
J  97.1% (33/34)    IGHJ4*02     25   .....C..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_21538

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*05                                                                                         297     7e-83
IGHD3-10*01                                                                                           12.2    31   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*05	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	TGGTTC	TACGTGGCG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGTGGTTCTACGTGGCGACAACTGGTTCAACCTC	VRVVLRGDNWFNL	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	220	30	0	88


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  T  R  G  G  Y  S  W  S  W  I  R  Q  S  P  G  K  G 
                    Query_4876     1    ACCCTGTCCCTCACCTGCGCTGTGTCCGGTGGCTCCATCACCAGGGGTGGTTACTCCTGGAGTTGGATCCGCCAGTCCCCAGGGAAGGGC  90
V  88.0% (220/250)  IGHV4-30-2*05  49   .......................C..T.............G...T.................C........G...C.A............  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  A  N  I  Y  Y  S  G  K  T  N  F  N  P  S  L  K  S  R  L  T  I  S  L  D  A  S 
                    Query_4876     91   CTGGAGTGGATTGCGAACATCTATTATAGTGGGAAGACCAACTTCAATCCGTCCCTCAAGAGTCGACTTACCATATCACTAGACGCGTCC  180
V  88.0% (220/250)  IGHV4-30-2*05  139  .............G.T........C.........GC...T...A...C..................G...........G.....A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         E  N  Q  F  S  L  K  L  M  S  M  T  A  A  D  T  A  V  Y  Y  C  V  R  V  V  L  R  G  D  N 
                    Query_4876     181  GAGAACCAATTCTCTCTGAAACTTATGTCGATGACTGCCGCAGACACGGCCGTTTATTACTGTGTCAGAGTGGTTCTACGTGGCGACAAC  270
V  88.0% (220/250)  IGHV4-30-2*05  229  A.......G.....C.....G..G.GC..TG......................G..........C.....--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01    10   ----------------------------------------------------------------------......--------------  15
J  94.1% (48/51)    IGHJ5*02       1    -------------------------------------------------------------------------------------.....  5

                                        ----------->                                  
                                         W  F  N  L  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_4876     271  TGGTTCAACCTCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  316
J  94.1% (48/51)    IGHJ5*02       6    ......G...C.................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_90855

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           336     1e-94
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	N/A	N/A	TCGTGCAGAAAGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGTCGTGCAGAAAGGCTTTGACTTC	ATVVQKGFDF	249	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	104	10	0	91.2
CDR3-IMGT (germline)	249	255	7	6	1	0	85.7
Total	N/A	N/A	255	235	20	0	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4877   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAAAGCCTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.2% (235/255)  IGHV3-15*01  47   .......T......................................C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  G  I  D  G  G  T  A  D  Y  A  A  L  V  K  G  R  C  T  I  S  R  D  
                    Query_4877   91   AATGGGTTGGCCGTATTAAAAGCGGAATTGATGGTGGGACCGCAGACTACGCTGCACTCGTGAAAGGCAGATGCACCATCTCAAGAGATG  180
V  92.2% (235/255)  IGHV3-15*01  137  .G.....................AA..C............AA...............C..............T.................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--
                                      D  L  K  N  T  L  Y  L  Q  L  N  S  V  R  S  E  D  T  G  V  Y  Y  C  A  T  V  V  Q  K  G  
                    Query_4877   181  ATTTAAAAAACACACTGTATCTGCAACTGAACAGCGTGAGAAGCGAGGACACAGGCGTCTATTACTGTGCCACAGTCGTGCAGAAAGGCT  270
V  92.2% (235/255)  IGHV3-15*01  227  ...C.........G............A........C...A..C...........C...G.........A......---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4877   271  TTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.7% (43/44)    IGHJ4*02     7    ......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_90856

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           406     1e-115
IGHD4-17*01                                                                                           18.0    0.69  
IGHJ6*01                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAG	CTACGGTGA	GTCCGAGTACTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTC	ARDLATVSPSTFYYGMDV	291	344	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	106	8	0	93
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	278	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  T 
                    Query_4878   3    CAGGTGCAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCTTCTGGTTACACCTTTACC  92
V  93.9% (278/296)  IGHV1-18*04  1    .....T....................T..........................................G....................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y 
                    Query_4878   93   AGTTACGGTATCACTTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTAT  182
V  93.9% (278/296)  IGHV1-18*04  91   ..C..........GC........A..............A................................C......A...........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  S  D  D 
                    Query_4878   183  GCACAGATGGTCCGAGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGATCTGACGAC  272
V  93.9% (278/296)  IGHV1-18*04  181  .......A.C...AG.G.................C....................C..........C.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  T  F  Y  Y  G  M  D  V  W  G  Q  G  T  T 
                    Query_4878   273  ACGGCCGTGTATTACTGTGCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTCTGGGGTCAAGGGACCACG  362
V  93.9% (278/296)  IGHV1-18*04  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------------.........--------------------------------------------------  12
J  98.1% (52/53)    IGHJ6*01     11   -----------------------------------------------------........................G............  47

                                                      
                                       V  T  V  S  S  
                    Query_4878   363  GTCACCGTCTCCTCAG  378
J  98.1% (52/53)    IGHJ6*01     48   ................  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_90857

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           271     7e-75
IGHD2-2*01                                                                                            27.6    8e-04
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTTCTC	TATTGTAGTTGTACCAG	TCCCGGATGAAGACAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACTTCTCTATTGTAGTTGTACCAGTCCCGGATGAAGACAAGTACGGTCTGGACGCC	AKDFSIVVVPVPDEDKYGLDA	237	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	19	5	0	79.2
FR2-IMGT	48	98	51	45	6	0	88.2
CDR2-IMGT	99	122	24	16	8	0	66.7
FR3-IMGT	123	236	114	103	11	0	90.4
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	233	203	30	0	87.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  T  S  A  M  T  W  V  R  Q  P  P  G  Q  G  L  E  W  V  A  S  L 
                    Query_4879   12   TGTGCAGCCTCTGGATTCACGTTTAGCACTTCCGCCATGACCTGGGTCCGCCAGCCTCCAGGGCAGGGGCTGGAGTGGGTCGCAAGTCTT  101
V  87.1% (203/233)  IGHV3-23*01  64   ....................C.......GC.AT.......G.............G........A.................T..GC.A..  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       T  G  T  G  G  D  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  K  K  T  L  Y  L 
                    Query_4879   102  ACTGGGACTGGGGGCGACACACACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGATAATCCCAAGAAAACATTGTATCTG  191
V  87.1% (203/233)  IGHV3-23*01  154  .G...T.G...T..TAG....T.........................G.................C...T.......C..GC........  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------------------CDR3-IMGT---------
                                       E  M  T  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  F  S  I  V  V  V  P  V  P  D  E  D 
                    Query_4879   192  GAAATGACGAGTCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGACTTCTCTATTGTAGTTGTACCAGTCCCGGATGAAGAC  281
V  87.1% (203/233)  IGHV3-23*01  244  C......AC..C.........................................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  94.1% (16/17)    IGHD2-2*01   5    -----------------------------------------------------------.........A.......--------------  21

                                      ----------------->                                 
                                       K  Y  G  L  D  A  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_4879   282  AAGTACGGTCTGGACGCCTGGGGCCAAGGGACAACAGTCATCGTCTCCTCA  332
J  89.6% (43/48)    IGHJ6*02     15   ---......A......T...............C..G....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_90850

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*14                                                                                           291     5e-81
IGHD3-22*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*14	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	AGTGGTT	CTATCTTAATTCTTACACC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAGTGGTTCTATCTTAATTCTTACACCCTTTGACCAC	ARDSGSILILTPFDH	230	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	18	6	0	75
FR2-IMGT	41	91	51	48	3	0	94.1
CDR2-IMGT	92	115	24	19	5	0	79.2
FR3-IMGT	116	229	114	109	5	0	95.6
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	205	19	0	91.5


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  A  L  R  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  H  E 
                    Query_4880   14   TCTGGATTCGCCCTCAGAAGTTACGCAATGCATTGGGTCCGCCAGGCTCCAGGCAAGGGACTGGAATGGGTGGCAGTTATTTCACATGAG  103
V  91.5% (205/224)  IGHV3-30*14  73   .........A..T....T..C..T..T.....C..........................G.....G..............A...T....T  162
                                       S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  I  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  F  L  Q  M  N 
                    Query_4880   104  GGAATCAATAAATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACACTGTTTCTTCAAATGAAC  193
V  91.5% (205/224)  IGHV3-30*14  163  ....GT................................A................................G....A.............  252
                                       G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><-----------------CDR3-IMGT----------------->         
                                       S  L  R  T  E  D  T  A  L  Y  Y  C  A  R  D  S  G  S  I  L  I  L  T  P  F  D  H  W  G  Q 
                    Query_4880   194  AGCCTGAGAACTGAGGACACGGCTCTGTATTACTGTGCGAGAGACAGTGGTTCTATCTTAATTCTTACACCCTTTGACCACTGGGGCCAG  283
V  91.5% (205/224)  IGHV3-30*14  253  .........G..............G...................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  100.0% (7/7)     IGHD3-22*01  17   ---------------------------------------------.......--------------------------------------  23
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------------------------------.......T...........  23

                                                               
                                       G  T  L  V  T  V  S  S  
                    Query_4880   284  GGAACCCTGGTCACCGTCTCCTCAG  308
J  97.7% (43/44)    IGHJ4*02     24   .........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_90851

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD3-16*01                                                                                           12.2    33   
IGHJ1*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCCCCTCTCCAGAA	CTTATA	TTTCGTCCTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCCCCTCTCCAGAACTTATATTTCGTCCTGGTACTTCCAGGAC	AKDPLSRTYISSWYFQD	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  A  M  S  W  V  R  Q  S  P  G  K  G  L  
                    Query_4881   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCGACTATGCCATGAGCTGGGTCCGCCAGTCTCCAGGGAAGGGTCTGG  90
V  90.8% (227/250)  IGHV3-23*01  47   ............................................AG.........................G.............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  A  S  S  G  R  T  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4881   91   AGTGGGTCTCAGCGATCAGTGCTAGTAGTGGTCGCACATACTATGGAGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  90.8% (227/250)  IGHV3-23*01  137  .............T..T....G....G.....A..........C.C......C.....................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  D  T  L  F  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  D  P  L  S  R  T  Y  
                    Query_4881   181  GGGACACCCTATTTTTGGAAATGAACAGCCTGCGAGTCGAGGACACGGCCGTCTACTACTGTGCGAAAGATCCCCTCTCCAGAACTTATA  270
V  90.8% (227/250)  IGHV3-23*01  227  A.A....G..G.A.C..C..............A...C...............A..T..............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD3-16*01  30   ------------------------------------------------------------------------------------......  35

                                      GT-------------------->                                  
                                      I  S  S  W  Y  F  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4881   271  TTTCGTCCTGGTACTTCCAGGACTGGGGTCAGGGCACCCTGGTCACCGTCTCCTCAG  327
J  95.7% (44/46)    IGHJ1*01     7    -----------.........C.......C............................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_90853

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           349     3e-98
IGHD4-17*01                                                                                           21.8    0.043
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CGCAGA	ACTACGGTTACTAC	TTCGACCTTTATTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCGCAGAACTACGGTTACTACTTCGACCTTTATTTCTACTTCTTCGGTATGGACGTC	AKAQNYGYYFDLYFYFFGMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  F  A  M  S  W  V  R  P  A  P  G  K  G  L  
                    Query_4882   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGCAGCTTTGCCATGAGCTGGGTCCGCCCGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-23*01  47   ....................................C...........A....................A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  N  S  G  G  R  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  V  N  S  
                    Query_4882   91   AGTGGGTCTCAGGTATTAATAATAGTGGTGGTAGGACATACTACGTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGTCAATTCCA  180
V  94.8% (236/249)  IGHV3-23*01  137  ............C.....G.GG............C..........C...................................A........  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  I  Y  Y  C  A  K  A  Q  N  Y  G  Y  Y  
                    Query_4882   181  AGAACACGCTGTATCTCCAAATGAACAGCCTGGGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGCGCAGAACTACGGTTACTACT  270
V  94.8% (236/249)  IGHV3-23*01  227  ................G...............A.................G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD4-17*01  3    ---------------------------------------------------------------------------........G.....-  16

                                      DR3-IMGT-------------------------->                                 
                                      F  D  L  Y  F  Y  F  F  G  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_4882   271  TCGACCTTTATTTCTACTTCTTCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  338
J  94.5% (52/55)    IGHJ6*02     8    -------------.....A..A..................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_201895

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           291     6e-81
IGHD5-18*01                                                                                           18.0    0.67 
IGHJ5*02                                                                                              89.1    6e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	281	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	46	24	0	65.7
CDR1-IMGT	71	94	24	16	8	0	66.7
FR2-IMGT	95	145	51	43	8	0	84.3
CDR2-IMGT	146	166	21	17	4	0	81
FR3-IMGT	167	280	114	107	7	0	93.9
CDR3-IMGT (germline)	281	288	8	8	0	0	100
Total	N/A	N/A	288	237	51	0	82.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  M  Q  P  G  G  S  L  R  L  S  C  S  T  S  G  F  T  V  I  N  N
                    Query_4883   1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATGCAGCCTGGGGGGTCCCTGAGACTCTCCTGTTCGACCTCTGGATTCACCGTCATTAATAA  90
V  82.3% (237/288)  IGHV4-59*02  6    .......CA.G....G..CCC...AC..G..A.....TC..A.A.....TCC...A....CA.TGT......TGG.T......G..G.T.  95
                                        Q  L  Q  E  S  G  P  G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S
                    Query_4883   91   TTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTC  180
V  82.3% (237/288)  IGHV4-59*02  96   C...TG.......A....G...C.C...........A..............G......T..........G.GC.................  185
                                        Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        L  K  S  R  A  T  I  S  V  D  T  S  K  S  Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V
                    Query_4883   181  CCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGCCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGT  270
V  82.3% (237/288)  IGHV4-59*02  186  ............A.T......A...................A..............A.........................A.......  275
                                        L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V

                                      ---------><----------------------CDR3-IMGT--------------------->                          
                                        Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F  G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V
                    Query_4883   271  TTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGT  360
V  82.3% (237/288)  IGHV4-59*02  276  G.................------------------------------------------------------------------------  293
                                        Y  Y  C  A  R                                                                           
D  83.3% (15/18)    IGHD5-18*01  1    -----------------------------.......C.G..A.....-------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    -------------------------------------------------...........................A.............  43

                                              
                                        S  S  
                    Query_4883   361  CTCCTCAG  368
J  98.0% (48/49)    IGHJ5*02     44   ........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_201894

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           336     1e-94
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCTCGTTTATG	ATGGTTCGGGGAGT	CCTCCCGAAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTCGTTTATGATGGTTCGGGGAGTCCTCCCGAAGGACTAC	ARLSFMMVRGVLPKDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  V  N  S  G  D  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4884   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCGTCAACAGTGGTGATTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  93.2% (232/249)  IGHV4-61*08  49   ..................A.....................G........G..A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  T  G  G  A  N  Y  N  P  S  L  K  S  R  V  S  I  S  I  D  T  S 
                    Query_4884   91   CTCGAGTGGATTGGATATATCTATTACACTGGGGGCGCCAACTACAATCCCTCCCTCAAGAGTCGAGTCAGCATATCAATAGACACGTCC  180
V  93.2% (232/249)  IGHV4-61*08  139  ..G...........G.............G....A..A..........C......................C.......G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       E  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  S  F  M  M  V  R 
                    Query_4884   181  GAGAATCAGTTCTCCCTGAAGCTGAGTTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGCGAGACTCTCGTTTATGATGGTTCGG  270
V  93.2% (232/249)  IGHV4-61*08  229  A....C....................C..........................G..T............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (14/14)   IGHD3-10*01  9    ---------------------------------------------------------------------------------.........  17

                                      GT------------------>                                  
                                       G  V  L  P  K  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4884   271  GGAGTCCTCCCGAAGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  100.0% (14/14)   IGHD3-10*01  18   .....--------------------------------------------------  22
J  100.0% (40/40)   IGHJ4*02     9    ---------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_201897

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           413     2e-117
IGHD6-25*01                                                                                           12.2    35    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TT	AGCGGC	GAAGGTAACCTTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTAGCGGCGAAGGTAACCTTATTGACTAC	AKLSGEGNLIDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  R  Y
                    Query_4885   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCAGGTA  90
V  95.5% (277/290)  IGHV5-51*01  6    ..................................................................T....................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  Y  D  V  R  Y  R  P
                    Query_4885   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTATGATGTGAGATACAGACC  180
V  95.5% (277/290)  IGHV5-51*01  96   .......................................................................C....ACC........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4885   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGCACCGCCTTTTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (277/290)  IGHV5-51*01  186  ...................................A.................ACC..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  K  L  S  G  E  G  N  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4885   271  CATTTATTACTGTGCGAAACTTAGCGGCGAAGGTAACCTTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.5% (277/290)  IGHV5-51*01  276  ...G.............G..---------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD6-25*01  10   ----------------------......-------------------------------------------------------  15
J  100.0% (42/42)   IGHJ4*02     7    -----------------------------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_160575

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           400     9e-114
IGHD3-22*01                                                                                           33.4    2e-05 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCGGATC	ACTATGATAGTAGTGGT	C	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCGGATCACTATGATAGTAGTGGTCACTACTACTACAATATGGACGTC	ARVPDHYDSSGHYYYNMDV	283	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	69	68	67	1	0	98.5
CDR1-IMGT	70	93	24	22	2	0	91.7
FR2-IMGT	94	144	51	49	2	0	96.1
CDR2-IMGT	145	168	24	20	4	0	83.3
FR3-IMGT	169	282	114	107	7	0	93.9
CDR3-IMGT (germline)	283	289	7	7	0	0	100
Total	N/A	N/A	288	272	16	0	94.4


Alignments

                                      <-----------------------------FR1-IMGT-----------------------------><-------CDR1-IMGT-----
                                         L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  V  S  S  Y  
                    Query_4886   2    AGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCGTCAGCAGCTATG  91
V  94.4% (272/288)  IGHV1-69*01  8    ................G............................................................T............  97
                                         L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y  

                                      -><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------------
                                      G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  I  L  M  F  D  T  P  N  Y  A  Q  
                    Query_4886   92   GTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTGGAGTGGATGGGAGTGATCATCCTTATGTTTGATACACCAAACTACGCACAGA  181
V  94.4% (272/288)  IGHV1-69*01  98   C....................................T.............G........C...C....G....G...............  187
                                      A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q  

                                      ----------------------------------------FR3-IMGT------------------------------------------
                                      N  F  Q  G  R  V  T  I  T  A  D  E  S  T  N  T  A  Y  M  E  L  S  N  L  R  S  E  D  T  A  
                    Query_4886   182  ACTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCGACGAACACAGCCTACATGGAGTTGAGCAACCTGAGATCTGAGGACACGGCCG  271
V  94.4% (272/288)  IGHV1-69*01  188  .G...................................C....G................C......G.......................  277
                                      K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A  

                                      ----------><-----------------------CDR3-IMGT----------------------->                      
                                      V  Y  F  C  A  R  V  P  D  H  Y  D  S  S  G  H  Y  Y  Y  N  M  D  V  W  G  Q  G  T  T  V  
                    Query_4886   272  TTTATTTCTGTGCGAGAGTTCCGGATCACTATGATAGTAGTGGTCACTACTACTACAATATGGACGTCTGGGGCCAAGGGACCACGGTCA  361
V  94.4% (272/288)  IGHV1-69*01  278  .G....A...........------------------------------------------------------------------------  295
                                      V  Y  Y  C  A  R                                                                          
D  100.0% (17/17)   IGHD3-22*01  6    ---------------------------.................----------------------------------------------  22
J  96.4% (54/56)    IGHJ6*02     7    ---------------------------------------------...........GG................................  51

                                                 
                                      T  V  S  S 
                    Query_4886   362  CCGTCTCCTCA  372
J  96.4% (54/56)    IGHJ6*02     52   ...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_201891

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           336     1e-94
IGHD6-19*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTCCCGCGGG	GCAGTGGCTGG	C	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTCCCGCGGGGCAGTGGCTGGCCTTTGACTAC	ARAPAGQWLAFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  G  F  S  S  Y  H  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_4887   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGGTTTCAGTAGCTACCACATGCACTGGGTCCGCCAGGTTCCAGGCAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-30*03  47   ...................................ACC...........TGG....................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  F  D  G  R  N  K  H  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4887   91   AGTGGGTGGCACTTATATCATTTGATGGAAGAAATAAACACTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCTAGAGACAATTCCA  180
V  93.2% (232/249)  IGHV3-30*03  137  ...........G.........A.........T......T......C..............................C.............  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  G  D  D  T  A  V  F  Y  C  A  R  A  P  A  G  Q  W  L  
                    Query_4887   181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGAGGTGACGACACGGCTGTGTTTTACTGTGCGAGAGCTCCCGCGGGGCAGTGGCTGG  270
V  93.2% (232/249)  IGHV3-30*03  227  .......G............................C...G.............A..............---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-19*01  8    -------------------------------------------------------------------------------...........  18

                                      ---------->                                  
                                      A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4887   271  CCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (44/44)   IGHJ4*02     5    -............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_90859

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         300     8e-84
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	220	28	0	88.7


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  D  S  I  N  T  G  N  Y  Y  W  T  W  I  R  Q  R  P  E  K  G 
                    Query_4888     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAACACTGGCAATTACTACTGGACCTGGATCCGCCAGCGCCCAGAGAAGGGC  90
V  88.7% (220/248)  IGHV4-30-4*01  49   ...............................G........G..G...TG............GT.............C.....G.......  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  N  G  I  T  Y  Y  S  P  S  L  R  G  R  I  A  I  S  V  D  R  S 
                    Query_4888     91   CTGGAGTGGATTGGATACATATATTACAATGGGATCACCTACTACAGCCCGTCCCTCCGGGGGCGAATTGCCATATCAGTAGACAGGTCC  180
V  88.7% (220/248)  IGHV4-30-4*01  139  ..............G.....C.......G.....G...........A..........AA.A.T...G..A...............C....  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                         K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_4888     181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  88.7% (220/248)  IGHV4-30-4*01  229  ..................A.......C........T..............C........C...G.C..----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01     9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02       10   -------------------------------------------------------------------------------...........  20

                                                                   
                                         Q  G  T  L  V  T  V  S  S 
                    Query_4888     271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02       21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_201893

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           279     3e-77
IGHD1-20*01                                                                                           12.2    34   
IGHJ2*01                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-20*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGGCGCCCCAAGGGCCCCCTGATAATA	ATAACT	TCCGGCGAAAGAAA	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCGCCCCAAGGGCCCCCTGATAATAATAACTTCCGGCGAAAGAAATGGTACTTCGATCTC	ARAPQGPPDNNNFRRKKWYFDL	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	212	34	0	86.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  E  Y  S  L  T  T  Y  A  M  A  W  V  R  Q  A  P  G  K  G  L  
                    Query_4889   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGAATACTCTTTGACCACCTACGCCATGGCCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  86.2% (212/246)  IGHV3-23*01  47   .....................C........G..T.A.C..T.G..G...T......AG.........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  V  S  G  L  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4889   91   AATGGGTCTCGGGCGTTAGTGGCCTTGGTGGCAGCACATATTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  86.2% (212/246)  IGHV3-23*01  137  .G........A.CTA.......TAG......T........C..C..............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      R  N  T  L  Y  L  D  M  N  S  L  R  G  D  D  T  A  I  Y  Y  C  A  R  A  P  Q  G  P  P  D  
                    Query_4889   181  GGAACACCCTCTATTTGGACATGAACAGCCTAAGAGGCGACGACACGGCCATTTATTACTGTGCGAGGGCGCCCCAAGGGCCCCCTGATA  270
V  86.2% (212/246)  IGHV3-23*01  227  A......G..G...C..C.A...........G....C...G.........G.A.............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      -CDR3-IMGT--------------------------->                                
                                      N  N  N  F  R  R  K  K  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S
                    Query_4889   271  ATAATAACTTCCGGCGAAAGAAATGGTACTTCGATCTCTGGGGCCGAGGCACCCTGGTCACTGTCTCCTC  340
D  100.0% (6/6)     IGHD1-20*01  4    ---......-------------------------------------------------------------  9
J  97.9% (46/47)    IGHJ2*01     5    -----------------------.......................T.......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_201892

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           411     5e-117
IGHD1-26*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTGTTTTC	TGGGACCTACTAC	CTTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTAC	ARVFSGTYYLLDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	276	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  T  A  F  G  Y  S  F  T  S  Y
                    Query_4890   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTACGGCTTTTGGATACAGCTTTACCAGTTA  90
V  95.5% (276/289)  IGHV5-51*03  6    ..............................................................A..G..C..................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  R  D  G  E  T  R  Y  S  P
                    Query_4890   91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTCGTGACGGTGAAACCAGATACAGCCC  180
V  95.5% (276/289)  IGHV5-51*03  96   C...............................................................G.....TC...T..............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  S  I  S  A  G  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_4890   181  GTCCTTCCAAGGCCAGGTCAGCATCTCAGCCGGCAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  95.5% (276/289)  IGHV5-51*03  186  ....................C...........A........................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                
                                        M  Y  Y  C  A  R  V  F  S  G  T  Y  Y  L  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4890   271  CATGTATTATTGTGCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  354
V  95.5% (276/289)  IGHV5-51*03  276  .........C.........-----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                  
D  92.3% (12/13)    IGHD1-26*01  8    ---------------------------.....G.......--------------------------------------------  20
J  100.0% (40/40)   IGHJ4*02     7    --------------------------------------------........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_54901

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           330     1e-92
IGHD2-21*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCGCCGGGAC	GGTGGTAATT	CCCCTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCGCCGGGACGGTGGTAATTCCCCTATTGACTAC	ARPRRDGGNSPIDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  T  D  G  Y  Y  W  S  W  I  R  Q  F  P  G  K  G 
                    Query_4891   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGAACTGATGGTTACTACTGGAGCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  92.4% (230/249)  IGHV4-31*03  49   .........................................C.G..G............................CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  Y  H  T  G  S  T  Y  Y  T  P  S  V  R  G  R  V  T  M  S  V  D  T  S 
                    Query_4891   91   CTGGAGTGGATTGGGTTCATCTATCACACTGGGAGCACCTACTACACCCCGTCCGTCCGGGGTCGAGTCACCATGTCAGTGGACACGTCT  180
V  92.4% (230/249)  IGHV4-31*03  139  ................A.......T...G.................A.......C..AA.A.......T.....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  R  R  D  G  G  N 
                    Query_4891   181  AAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGACCTCGCCGGGACGGTGGTAAT  270
V  92.4% (230/249)  IGHV4-31*03  229  ...................A.....G...........................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD2-21*01  11   ---------------------------------------------------------------------------------......G..  19

                                      -------------->                                  
                                       S  P  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4891   271  TCCCCTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
D  90.0% (9/10)     IGHD2-21*01  20   .------------------------------------------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_243119

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           400     9e-114
IGHD3-22*01                                                                                           27.6    9e-04 
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TC	ACTATGAGAGTAGTGATTTTTAC	ACACA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCACTATGAGAGTAGTGATTTTTACACACATGATGGTTTTAATATC	ASHYESSDFYTHDGFNI	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	66	8	0	89.2
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	112	2	0	98.2
CDR3-IMGT (germline)	290	294	5	5	0	0	100
Total	N/A	N/A	292	274	18	0	93.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  T  S  G  Y  S  F  T  
                    Query_4892   3    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGTGAGTCTCTGAGGATCTCCTGTAAGACCTCTGGATACAGCTTCACCA  92
V  93.8% (274/292)  IGHV5-51*03  2    ....G.....G.......................A........G..........A.............GGT..............T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  S  M  G  I  I  Y  P  S  D  S  D  T  T  Y  
                    Query_4892   93   GCTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTCCATGGGCATCATCTATCCCAGTGACTCCGATACCACATACA  182
V  93.8% (274/292)  IGHV5-51*03  92   ............G...................................GG.....G...........TG.......T.......G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  R  A  S  D  
                    Query_4892   183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACA  272
V  93.8% (274/292)  IGHV5-51*03  182  ..............................................................................A...........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  M  Y  Y  C  A  S  H  Y  E  S  S  D  F  Y  T  H  D  G  F  N  I  W  G  Q  G  T  M  V  
                    Query_4892   273  CCGCCATGTATTACTGTGCGAGTCACTATGAGAGTAGTGATTTTTACACACATGATGGTTTTAATATCTGGGGCCAAGGGACAATGGTCA  362
V  93.8% (274/292)  IGHV5-51*03  272  ......................--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  87.0% (20/23)    IGHD3-22*01  6    ------------------------.......T.......G..A....-------------------------------------------  28
J  96.0% (48/50)    IGHJ3*02     1    ----------------------------------------------------.....C....G...........................  38

                                                  
                                      T  V  S  S  
                    Query_4892   363  CCGTCTCTTCAG  374
J  96.0% (48/50)    IGHJ3*02     39   ............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_300226

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGG	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGGGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGGGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_4893   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  V  S  V  D  T  S  K  S 
                    Query_4893   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCGTTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T....A.A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  I  S  L  S  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  G  G  Y  N  F 
                    Query_4893   181  CAGATCTCCCTGAGCCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGGGTGGATATAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ...T.........AG........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  G  G  Q  G  A  L  V  T  V  S  S  
                    Query_4893   271  GGTTCTAACTGGTTCGACCCCGGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  95.9% (47/49)    IGHJ5*02     3    ------...............T...........A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_300227

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD3-16*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4894   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (227/249)  IGHV4-61*01  49   .......................C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S 
                    Query_4894   91   CTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  91.2% (227/249)  IGHV4-61*01  139  ....A.........GT............G......CAC..A.........................G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y 
                    Query_4894   181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTAT  270
V  91.2% (227/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------------.....  28

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_4894   271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
D  100.0% (7/7)     IGHD3-16*02  29   ..--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_300224

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           305     3e-85
IGHD2-8*02                                                                                            19.9    0.16 
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	G	GGACATTGTAATGCTGGTG	ACTGCCACGGGTAT	GACCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGACATTGTAATGCTGGTGACTGCCACGGGTATGACCGC	AKGHCNAGDCHGYDR	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	221	26	0	89.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  I  N  S  V  M  S  W  V  R  Q  A  P  G  R  G  L  
                    Query_4895   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTATCAACTCTGTCATGAGTTGGGTCCGCCAGGCTCCAGGGAGGGGACTGG  90
V  89.5% (221/247)  IGHV3-23*01  47   ..........................................G..G..A..C......C......................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  Y  I  S  G  S  G  R  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4895   91   ACTGGGTCTCATATATCAGTGGTAGTGGTCGCAACACGTACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  89.5% (221/247)  IGHV3-23*01  137  .G.........GC...T............G.T.G...A....................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      N  D  T  L  F  L  Q  M  D  N  L  T  A  G  D  T  A  V  Y  Y  C  A  K  G  H  C  N  A  G  D  
                    Query_4895   181  ACGACACACTGTTTCTGCAAATGGACAACCTGACAGCCGGCGACACGGCCGTTTATTACTGCGCGAAGGGACATTGTAATGCTGGTGACT  270
V  89.5% (221/247)  IGHV3-23*01  227  .GA....G....A..........A...G.....G.....AG...........A........T.....-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  84.2% (16/19)    IGHD2-8*02   2    --------------------------------------------------------------------...T......C..G.....---  20

                                      ---------------->                                  
                                      C  H  G  Y  D  R  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_4895   271  GCCACGGGTATGACCGCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  321
J  95.0% (38/40)    IGHJ5*02     12   -----------....C.......................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_300225

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4896   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_4896   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_4896   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  P  T  V  T  V  S  S 
                    Query_4896   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGCCCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  97.9% (46/47)    IGHJ6*02     16   ------------..........................A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_300223

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4897   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (226/248)  IGHV3-21*01  47   ............................T............AG...C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  G  
                    Query_4897   91   AGTGGGTCTCATCCATCAGTAGTAGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  91.1% (226/248)  IGHV3-21*01  137  ................T........T...AGT......T.C..C..A......G..A..............................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_4897   181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  91.1% (226/248)  IGHV3-21*01  227  ....C..................AA...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4897   271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_300220

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-3*01                                                                                            10.3    117   
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GCTTG	ACGAT	CGCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGCTTGACGATCGCATACTACTTTGACTAC	ATGLTIAYYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4898   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (242/250)  IGHV4-31*03  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  D  T  S 
                    Query_4898   91   CTAGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTTACCATATCACTAGACACGTCT  180
V  96.8% (242/250)  IGHV4-31*03  139  ..G.......................................................A...................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  D  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  L  T  I  A  Y  Y 
                    Query_4898   181  AAGGACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGCTTGACGATCGCATACTAC  270
V  96.8% (242/250)  IGHV4-31*03  229  ...A...............A.................................G.............G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-3*01   6    ---------------------------------------------------------------------------.....----------  10
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4898   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_300221

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           366     2e-103
IGHD1-26*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GA	GGTGTAGTGGGAGC	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTAC	ARGGVVGAPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	262	28	0	90.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  T  A  G  G  S  F  S  S  Y
                    Query_4899   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGACCGCTGGAGGTAGTTTCAGCAGCTA  90
V  90.3% (262/290)  IGHV1-69*06  6    ..............................................................A.G.TT.......C.CC...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  M  R  Q  A  P  G  Q  G  L  E  W  M  G  A  I  M  P  L  Y  G  I  G  N  Y  A  Q
                    Query_4899   91   TGCTATCAGTTGGATGCGACAGGCCCCTGGGCAAGGGCTTGAGTGGATGGGAGCAATCATGCCTCTATATGGCATAGGAAACTACGCACA  180
V  90.3% (262/290)  IGHV1-69*06  96   .........C...G................A......................GG.....C...A.C.T...T.C..C............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  K  V  T  I  T  A  D  T  S  T  R  T  A  Y  M  E  L  S  G  L  R  S  A  D  T  A
                    Query_4899   181  GAAGTTCCAGGGCAAAGTCACGATTACCGCGGACACATCCACGAGGACAGCCTACATGGAGTTGAGTGGCCTGAGATCTGCGGACACGGC  270
V  90.3% (262/290)  IGHV1-69*06  186  ..............G....................A.........C...............C....CA............A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  G  G  V  V  G  A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_4899   271  CATGTATTATTGTGCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTACTGGGGCCAGGGAACTCTGGTCACCGTCTCCCCAG  353
V  90.3% (262/290)  IGHV1-69*06  276  .G.......C..........---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  92.9% (13/14)    IGHD1-26*01  1    ----------------------...A..........-----------------------------------------------  14
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------------........................C...............T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_157306

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         374     8e-106
IGHD3-22*01                                                                                           48.8    3e-10 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	AC	TTACTATGATAGTAGTGGTTATTAC	CTTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACTTACTATGATAGTAGTGGTTATTACCTTAACTACTTTGACCAC	ARTYYDSSGYYLNYFDH	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	244	5	0	98


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  R  V  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4900     1    ACCCTGTCCCTCACCTGCGCTGTCTCTCGTGTCTCCATCAGAAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  98.0% (244/249)  IGHV4-30-4*01  49   ..................A........G...G.........C.......A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4900     91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  98.0% (244/249)  IGHV4-30-4*01  139  ..........................................................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  Y  Y  D  S  S  G 
                    Query_4900     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAACTTACTATGATAGTAGTGGT  270
V  98.0% (244/249)  IGHV4-30-4*01  229  .....................................................................---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (25/25)   IGHD3-22*01    4    -----------------------------------------------------------------------...................  22

                                        MGT-------------------->                                  
                                         Y  Y  L  N  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4900     271  TATTACCTTAACTACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  100.0% (25/25)   IGHD3-22*01    23   ......----------------------------------------------------  28
J  97.9% (47/48)    IGHJ4*02       1    ----------...........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_235918

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD3-22*01                                                                                           16.1    2.3   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCAC	ARAPPFDYDLDVRGIHNFDH	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	236	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4901   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (236/244)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_4901   91   TGGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAGC  180
V  96.7% (236/244)  IGHV4-59*01  139  ..........A.................G.............................................A.............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D 
                    Query_4901   181  CAGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGAC  270
V  96.7% (236/244)  IGHV4-59*01  229  ..................AG...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-22*01  6    ----------------------------------------------------------------------------........------  13

                                      GT------------------------>                                  
                                       V  R  G  I  H  N  F  D  H  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4901   271  GTAAGGGGAATCCACAACTTTGACCACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  331
J  95.6% (43/45)    IGHJ4*02     4    ----------------........T...............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_157302

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           299     2e-83
IGHD4-17*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGG	TGACTACGGTGACTAC	CTTCGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTGACTACGGTGACTACCTTCGATAC	AREGDYGDYLRY	237	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	47	4	0	92.2
CDR2-IMGT	99	122	24	17	7	0	70.8
FR3-IMGT	123	236	114	106	8	0	93
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	233	212	21	0	91


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  G  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  Y  I 
                    Query_4902   12   TGTGCAGCCTCTGGTTTCACCTTCAGTGGTTATGAAATGAATTGGGTTCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCGCATACATT  101
V  91.0% (212/233)  IGHV3-48*03  64   ..............A............A.............C.....C................................TT........  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  T  G  G  T  I  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  D  K  S  S  V  Y  L 
                    Query_4902   102  AGCACTGGTGGCACCATCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGACAAGAGCTCCGTGTATCTG  191
V  91.0% (212/233)  IGHV3-48*03  154  ..T.G.A....T.GT.C.....................................................C.....A...AC........  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------CDR3-IMGT------------>         
                                       Q  L  D  S  V  R  A  E  D  T  A  V  Y  F  C  A  R  E  G  D  Y  G  D  Y  L  R  Y  W  G  Q 
                    Query_4902   192  CAATTGGACAGCGTGAGAGCCGAGGACACGGCTGTTTATTTCTGTGCGAGAGAGGGTGACTACGGTGACTACCTTCGATACTGGGGCCAG  281
V  91.0% (212/233)  IGHV3-48*03  244  ...A..A.....C...........................A............-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (16/16)   IGHD4-17*01  1    --------------------------------------------------------................------------------  16
J  97.3% (36/37)    IGHJ4*02     12   ------------------------------------------------------------------------------............  23

                                                               
                                       G  T  L  V  A  V  S  S  
                    Query_4902   282  GGAACCCTGGTCGCCGTCTCCTCAG  306
J  97.3% (36/37)    IGHJ4*02     24   ............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_300228

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         338     4e-95
IGHD2-8*01                                                                                            10.3    116  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TGGCAGATGGTCC	CTAAT	TTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAGATGGCAGATGGTCCCTAATTTAT	AADGRWSLIY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  I  F  K  T  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4903     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAAAACCTATGCTATGCACTGGGTCCGCCAGGCGCCAGGCAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-30-3*01  47   ....................................C.....GT.G...........................T................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  D  G  T  D  K  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_4903     91   AGTGGGTGGCAGTTATTTCATATGATGGAACCGATAAATACTACGCAGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.2% (233/250)  IGHV3-30-3*01  137  ................A.............G.A.......................A.................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                        K  N  T  L  S  L  Q  M  N  S  L  T  T  E  D  T  A  V  Y  Y  C  A  A  D  G  R  W  S  L  I  
                    Query_4903     181  AGAACACACTGTCTCTGCAAATGAACAGCCTGACAACTGAGGACACCGCTGTGTATTATTGTGCGGCAGATGGCAGATGGTCCCTAATTT  270
V  93.2% (233/250)  IGHV3-30-3*01  227  .......G....A....................G.G..........G...........C......AG...--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-8*01     12   -----------------------------------------------------------------------------------.....--  16

                                        ->                                  
                                        Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4903     271  ATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (34/34)   IGHJ4*02       15   --..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_157416

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           16.1    2.5  
IGHJ3*01                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGATCCCTT	CTATGATA	CTACAGGAAGTTATTCCTTTGACCTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACATATGGATCCCTTCTATGATACTACAGGAAGTTATTCCTTTGACCTT	VRHMDPFYDTTGSYSFDL	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	93	21	0	81.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	252	39	0	86.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  V  S  G  Y  R  F  T  S  K
                    Query_4904   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGAGTCTCTGGATACAGGTTTACCAGCAA  90
V  86.6% (252/291)  IGHV5-51*01  6    ....................................C.........................AG.GT...........C.........T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  H  M  P  G  Q  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_4904   91   ATGGATCGCCTGGGTGCGCCACATGCCCGGACAGGGCCTGGAGTGGATGGGCGTCATCTATCCCGGAGACTCTGATACCAGATACAACCC  180
V  86.6% (252/291)  IGHV5-51*01  96   C.......G............G........GA.A.................GA..........T..T...................G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  R  I  S  I  S  A  D  E  S  T  N  T  A  S  L  H  W  G  F  L  R  A  S  D  T  A
                    Query_4904   181  GTCCTTCCAAGGCCGGATCAGCATTTCAGCCGACGAGTCCACCAACACTGCCTCTCTGCACTGGGGCTTCCTGCGGGCCTCGGACACTGC  270
V  86.6% (252/291)  IGHV5-51*01  186  ..............A.G...C...C.........A......T..G...C....AC.....G...A..AG....AA............C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        I  Y  Y  C  V  R  H  M  D  P  F  Y  D  T  T  G  S  Y  S  F  D  L  W  G  Q  G  T  M  V  T
                    Query_4904   271  CATATACTATTGTGTGAGACATATGGATCCCTTCTATGATACTACAGGAAGTTATTCCTTTGACCTTTGGGGCCAAGGGACAATGGTCAC  360
V  86.6% (252/291)  IGHV5-51*01  276  ...G..T..C....C......---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-22*01  7    ---------------------------------........-------------------------------------------------  14
J  97.1% (33/34)    IGHJ3*01     17   -------------------------------------------------------------------.......................  39

                                                 
                                        V  S  S  
                    Query_4904   361  CGTCTCCTCAG  371
J  97.1% (33/34)    IGHJ3*01     40   ......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_194728

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           315     5e-88
IGHD1-20*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGAATACAA	GTATAAC	GGAATAGGG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGAATACAAGTATAACGGAATAGGGATGGACGTC	TRSEYKYNGIGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  E  S  R  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4905   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCGGGGTTCACCGAAAGTAGGAATTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  91.0% (223/245)  IGHV3-53*01  47   ............................T..........TC.....C..C.......G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  M  
                    Query_4905   91   AGTGGGTCTCAGTTATTTATAGTGGTGGTACCACACACTACGCAGATTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCATGA  180
V  91.0% (223/245)  IGHV3-53*01  137  ......................C.......G....T..........C..C...........A.........................A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      T  T  L  F  L  Q  M  N  S  L  R  A  E  D  S  A  V  Y  Y  C  T  R  S  E  Y  K  Y  N  G  I  
                    Query_4905   181  CCACATTGTTTCTTCAAATGAACAGTTTGAGAGCCGAGGACTCGGCCGTGTATTACTGTACGAGATCAGAATACAAGTATAACGGAATAG  270
V  91.0% (223/245)  IGHV3-53*01  227  A...GC...A...............CC..............A.................G.....-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD1-20*01  2    ----------------------------------------------------------------------------.......-------  8

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4905   271  GGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (42/42)   IGHJ6*02     21   --..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_194729

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            291     6e-81
IGHD2-21*01                                                                                           18.0    0.61 
IGHJ3*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-21*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CAGGAATAACAAGTT	TGGTGATGATCGCTA	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGGGACAGGAATAACAAGTTTGGTGATGATCGCTACTATGATGTATTTGATTTG	TRDRNNKFGDDRYYDVFDL	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  T  Y  W  M  A  W  I  R  Q  A  P  G  K  G  L  
                    Query_4906   1    GGTCCCTGAGACTCTCCTGTGCTGCCTCAGGTTTCACCTTTGGCACCTATTGGATGGCATGGATCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  87.2% (218/250)  IGHV3-7*01   47   ......................A.....T..A.........A.T.G..........AGC...G......................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  G  D  G  S  K  T  Y  Y  V  D  S  V  K  G  R  F  T  I  D  R  D  N  A  
                    Query_4906   91   AGTGGGTGGCCAATATAAAAGGAGATGGAAGTAAGACATACTATGTGGATTCTGTGAAGGGCCGCTTCACTATTGACAGAGACAATGCCA  180
V  87.2% (218/250)  IGHV3-7*01   137  .............C.....GCA..........G...A............C..............A.....C..CTC.........C....  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  F  Y  Y  C  T  R  D  R  N  N  K  F  G  
                    Query_4906   181  GGAACTCACTGTATCTGCAAATGAACAGCCTCAGAGTCGAGGACACGGCTTTTTATTACTGCACGAGGGACAGGAATAACAAGTTTGGTG  270
V  87.2% (218/250)  IGHV3-7*01   227  A..............................G....C.............G.G........TG....A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD2-21*01  10   -------------------------------------------------------------------------------------.....  14

                                      -IMGT----------------------->                                
                                      D  D  R  Y  Y  D  V  F  D  L  W  G  Q  G  T  M  V  T  V  S  S
                    Query_4906   271  ATGATCGCTACTATGATGTATTTGATTTGTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  331
D  86.7% (13/15)    IGHD2-21*01  15   G....T....---------------------------------------------------  24
J  91.7% (44/48)    IGHJ3*01     1    -------------.....CT......G.C................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_303755

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4907   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4907   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_4907   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4907   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_60421

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  P  G  G  S  I  A  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_4908   1    ACCCTGTCCCTCACCTGCACTGTCCCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*01  49   ........................T..............AG..G.T..................................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_4908   91   TGGATTGGATATATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  93.0% (227/244)  IGHV4-59*01  139  ........G...................G.....A............................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W 
                    Query_4908   181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGG  270
V  93.0% (227/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------------------------------------------....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_4908   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (35/35)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_303753

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           336     1e-94
IGHD6-13*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGT	GGTATAGCAGCA	CCCTTAAA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGTGGTATAGCAGCACCCTTAAATACTTTGACTAC	ARVWYSSTLKYFDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  I  S  G  T  H  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_4909   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCATCAGTGGTACTCACTATTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  93.2% (232/249)  IGHV4-31*03  50   .....TCC...A...........................G.......GG.T....C..................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  I  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_4909   94   TGGAGTGGATTGGCTACATTTATTATAGTGGGATCACCTACTACAATCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  93.2% (232/249)  IGHV4-31*03  140  .............G.....C.....C.......G............C...........................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  K  L  S  S  L  T  A  A  D  T  A  V  Y  F  C  A  R  V  W  Y  S  S  T  L  
                    Query_4909   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCCCTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGTGTGGTATAGCAGCACCCTTA  273
V  93.2% (232/249)  IGHV4-31*03  230  ............................TG...........................A...........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD6-13*01  2    ------------------------------------------------------------------------............------  13

                                      ------------->                                
                                      K  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4909   274  AATACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
J  100.0% (44/44)   IGHJ4*02     3    --............................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_303752

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           353     1e-99
IGHD6-13*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCCCCCCCCCGCCCTGGGTGT	GTATAGCAGCAGCTGGT	CCCTAACTCCGTTGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGTACAGATCCCCCCCCCGCCCTGGGTGTGTATAGCAGCAGCTGGTCCCTAACTCCGTTGTCTGACTCC	STDPPPALGVYSSSWSLTPLSDS	249	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	256	8	6	2	0	75
Total	N/A	N/A	256	241	15	0	94.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  R  N  A  W  M  R  W  V  R  Q  A  P  G  K  G  L  
                    Query_4910   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCGCTTTCAGAAACGCCTGGATGAGGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.1% (241/256)  IGHV3-15*01  47   .......T.......................A...A.......T..............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  Q  S  K  G  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_4910   91   AGTGGGTTGGCCGTATTCAAAGTAAAGGTGACGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  94.1% (241/256)  IGHV3-15*01  137  .................A....C...AC...T..........................................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  N  I  L  H  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  S  T  D  P  P  P  A  
                    Query_4910   181  ATTCAAAAAACATTCTGCATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTAGTACAGATCCCCCCCCCGCCC  270
V  94.1% (241/256)  IGHV3-15*01  227  ............CG...T...................................................CC.....--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 

                                      --------CDR3-IMGT----------------------------->                                  
                                      L  G  V  Y  S  S  S  W  S  L  T  P  L  S  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4910   271  TGGGTGTGTATAGCAGCAGCTGGTCCCTAACTCCGTTGTCTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  351
D  100.0% (17/17)   IGHD6-13*01  3    -------.................---------------------------------------------------------  19
J  97.6% (40/41)    IGHJ4*02     8    ----------------------------------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_303751

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           339     2e-95
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              48.8    7e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CCTCTATGCCGG	GTGGCTGG	GTCGCTG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCCTCTATGCCGGGTGGCTGGGTCGCTGTTGACTCT	AKASMPGGWVAVDS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  F  A  A  S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4911   1    GGTCCCTGAGACTCTCCTTTGCAGCCTCTGGATTCACCTTCAGGAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-30*18  47   ..................G........................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  S  D  G  S  N  K  Y  Y  G  D  P  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4911   91   AGTGGGTAGCAGTCATATCATCTGACGGAAGTAATAAATACTATGGAGACCCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (233/249)  IGHV3-30*18  137  .......G.....T.......A...T...................C....T.......................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  T  T  L  Y  L  Q  M  N  S  L  R  P  D  D  T  A  A  Y  Y  C  A  K  A  S  M  P  G  G  W  
                    Query_4911   181  AGACCACCCTATATCTGCAGATGAACAGCCTGAGACCTGATGACACGGCTGCTTATTACTGTGCGAAAGCCTCTATGCCGGGTGGCTGGG  270
V  93.6% (233/249)  IGHV3-30*18  227  ...A...G..G........A...............G....G..........TG................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD6-19*01  11   ---------------------------------------------------------------------------------........-  18

                                      ------------->                                
                                      V  A  V  D  S  W  G  Q  G  I  L  V  I  V  S  S
                    Query_4911   271  TCGCTGTTGACTCTTGGGGCCAGGGAATCCTGGTCATTGTCTCCTC  316
J  87.5% (35/40)    IGHJ4*02     7    ------......AC.............C........CC........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_303750

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           290     2e-80
IGHD2-21*02                                                                                           14.1    8.0  
IGHJ2*01                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-21*02	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CA	GGTGACT	CAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGGTGACTCAGTACTGGTACTTCGATCTC	ARQVTQYWYFDL	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	19	5	0	79.2
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	21	3	0	87.5
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	231	208	23	0	90


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  N  F  D  T  Y  S  M  N  W  V  R  Q  T  P  G  K  G  L  E  W  V  A  S  I 
                    Query_4912   13   TGTGCAGCCTCTGGATTCAACTTCGATACCTACAGCATGAACTGGGTCCGCCAGACTCCAGGGAAGGGGCTGGAGTGGGTCGCATCTATT  102
V  90.0% (208/231)  IGHV3-21*01  64   ...................C....AG..G...T.....................G..........................T....C...  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  T  G  S  S  Y  K  Y  Y  A  A  S  V  K  G  R  F  T  I  S  R  E  N  A  K  N  S  L  F  L 
                    Query_4912   103  AGTACTGGTAGTAGTTACAAATACTATGCAGCGTCTGTGAAGGGCCGATTCACCATCTCCAGAGAAAACGCCAAAAACTCACTCTTTCTG  192
V  90.0% (208/231)  IGHV3-21*01  154  ....G.A............T......C....AC..A.............................C........G........G.A....  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------CDR3-IMGT------------>         
                                       Q  M  N  S  L  R  G  D  D  T  A  I  Y  Y  C  A  R  Q  V  T  Q  Y  W  Y  F  D  L  W  G  R 
                    Query_4912   193  CAAATGAACAGCCTGAGAGGCGACGACACGGCTATATATTACTGTGCGAGACAGGTGACTCAGTACTGGTACTTCGATCTCTGGGGCCGC  282
V  90.0% (208/231)  IGHV3-21*01  244  ...................C...G.........G.G...............---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (7/7)     IGHD2-21*02  14   -----------------------------------------------------.......------------------------------  20
J  98.1% (51/52)    IGHJ2*01     2    ---------------------------------------------------------------..........................T  28

                                                               
                                       G  T  L  V  T  V  S  S  
                    Query_4912   283  GGCACCCTGGTCACTGTCTCCTCAG  307
J  98.1% (51/52)    IGHJ2*01     29   .........................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_194721

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            322     2e-90
IGHD3-9*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAAGAGCGGTACGCATTGAT	ACTGTTTATTA	CGAGGGGCCTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAAGAGCGGTACGCATTGATACTGTTTATTACGAGGGGCCTCCTGACTAC	ATRAVRIDTVYYEGPPDY	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  N  S  N  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_4913  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGTCCATCAGTAATAGTAACTGGTGGACTTGGATTCGCCAGCCCCCAGGAAAGGGGCTG  90
V  92.2% (225/244)  IGHV4-4*01  49   ................................C........C.G..............G....G.C..............G.........  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  I  D  S  G  S  T  N  Y  N  P  S  L  M  S  R  V  I  I  S  L  D  K  S  K 
                    Query_4913  91   GAGTGGATTGGGGAAATTATTGATAGTGGGAGCACCAACTACAACCCGTCCCTCATGAGTCGAGTCATCATCTCACTAGACAAGTCCAAG  180
V  92.2% (225/244)  IGHV4-4*01  139  .................CTA.C.................................A...........C...A...G..............  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                      N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  T  R  A  V  R  I  D  T  V 
                    Query_4913  181  AATCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGACAAGAGCGGTACGCATTGATACTGTT  270
V  92.2% (225/244)  IGHV4-4*01  229  ..C..............G....G................................G........--------------------------  292
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  90.9% (10/11)    IGHD3-9*01  17   ------------------------------------------------------------------------------------....G.  22

                                     GT--------------------->                                  
                                      Y  Y  E  G  P  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4913  271  TATTACGAGGGGCCTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  90.9% (10/11)    IGHD3-9*01  23   .....-----------------------------------------------------  27
J  100.0% (41/41)   IGHJ4*02    8    -----------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_194722

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           386     1e-109
IGHD1-26*01                                                                                           12.2    31    
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATAT	GTGGGA	AGGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATATGTGGGAAGGTACTACTTTGACTAC	AREYVGRYYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	249	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4914   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  99.2% (249/251)  IGHV4-61*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  Y  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_4914   91   CTGGAGTGGATTGGGTATATCTATTACAGTGGGTACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  99.2% (249/251)  IGHV4-61*01  139  .................................AG.......................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  Y  V  G  R  Y  Y 
                    Query_4914   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAATATGTGGGAAGGTACTAC  270
V  99.2% (249/251)  IGHV4-61*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-26*01  7    ---------------------------------------------------------------------------......---------  12
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_4914   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    ..............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_194723

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     7e-91
IGHD6-6*01                                                                                            19.9    0.15 
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-6*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCC	AGTATAGAAGATCGTC	GGCTGGT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCAGTATAGAAGATCGTCGGCTGGTTGCTTTTGATATC	ARPSIEDRRLVAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  R  G  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  Q 
                    Query_4915   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGGGGTTACTACTGGAGCTGGGTCCGTCAGCCCCCAGGGAAGGGGCTGCAG  90
V  92.6% (225/243)  IGHV4-34*01  49   .........................................T..................A....C.....................G..  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  I  N  H  R  G  S  S  Y  H  S  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_4915   91   TGGCTTGGCGAAATCAACCATAGAGGAAGTAGCTATCACAGCCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGTCCAAGAAC  180
V  92.6% (225/243)  IGHV4-34*01  139  ...A....G........T.....T.....C.C.A.CT...A...........................A.....A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  T  A  D  T  A  V  Y  Y  C  A  R  P  S  I  E  D  R  R  L  V 
                    Query_4915   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCACCGCGGACACGGCTGTCTATTACTGTGCGAGACCCAGTATAGAAGATCGTCGGCTGGTT  270
V  92.6% (225/243)  IGHV4-34*01  229  ..............................G................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (14/16)    IGHD6-6*01   2    ------------------------------------------------------------------.......C..C.....--------  17
J  100.0% (47/47)   IGHJ3*02     4    -----------------------------------------------------------------------------------------.  4

                                      ----------->                                  
                                       A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4915   271  GCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  316
J  100.0% (47/47)   IGHJ3*02     5    ..............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_194724

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           330     1e-92
IGHD3-16*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCGTGCTCTTA	ATTATGATTA	TACTAGTTTTAATTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CGTGCTCTTAATTATGATTATACTAGTTTTAATTGGTACTTTGACTTC	RALNYDYTSFNWYFDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	241	113	107	6	0	94.7
Total	N/A	N/A	241	226	15	0	93.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4916   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCATCTTCAGTAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.8% (226/241)  IGHV3-33*01  47   ....................................C........GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  R  I  D  Y  D  G  S  N  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_4916   91   AGTGGGTGGCACGTATAGACTATGATGGAAGTAATAAGTATTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGATTCCA  180
V  93.8% (226/241)  IGHV3-33*01  137  ...........GT....TGG.................A..C....C.....................................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  R  A  L  N  Y  D  Y  T  S  
                    Query_4916   181  AGAGCACCCTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTGTATTACTGCCGTGCTCTTAATTATGATTATACTAGTT  270
V  93.8% (226/241)  IGHV3-33*01  227  ...A...G........................A............................-----------------------------  287
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                
D  100.0% (10/10)   IGHD3-16*01  3    ------------------------------------------------------------------------..........--------  12

                                      T------------------>                                  
                                      F  N  W  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4916   271  TTAATTGGTACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.8% (45/46)    IGHJ4*02     3    --------..........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_194725

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           325     3e-91
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACCGCGAAAGTGG	GGAGTGGT	C	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACCGCGAAAGTGGGGAGTGGTCTTGATATC	ARDTAKVGSGLDI	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  A  V  S  S  S  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  
                    Query_4917   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCGCCGTCAGCAGCAGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  91.6% (229/250)  IGHV4-61*01  50   .....TCC...A....................T..........TG...G...........G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  G  G  D  A  K  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  
                    Query_4917   94   TGGAATGGATTGGGTATATCTACTACGGTGGAGACGCCAAGTACAACCCCTCCCTCAAGAGTCGCGTCACCATATCATTAGACACGTCCA  183
V  91.6% (229/250)  IGHV4-61*01  140  ....G.................T...A....GAG.A....C.......................A............G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  Q  F  S  L  K  L  S  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  D  T  A  K  V  G  S  
                    Query_4917   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGGCCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATACCGCGAAAGTGGGGAGTG  273
V  91.6% (229/250)  IGHV4-61*01  230  ................................A...................G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-3*01   15   ------------------------------------------------------------------------------------......  20

                                      ---------->                                  
                                      G  L  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_4917   274  GTCTTGATATCTGGGGCCAAGGGACAATGGTCATCGTCTCTTCAG  318
D  100.0% (8/8)     IGHD3-3*01   21   ..-------------------------------------------  22
J  97.6% (41/42)    IGHJ3*02     9    ---..............................C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_303759

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           294     6e-82
IGHD1-26*01                                                                                           10.3    120  
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	GGGAGGTCGA	TGGGA	CACGGACATA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAGGGAGGTCGATGGGACACGGACATA	VRQGGRWDTDI	252	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	26	35	10	9	1	0	90
CDR1-IMGT	36	65	30	25	5	0	83.3
FR2-IMGT	66	116	51	50	1	0	98
CDR2-IMGT	117	137	21	17	4	0	81
FR3-IMGT	138	251	114	103	11	0	90.4
CDR3-IMGT (germline)	252	259	8	7	1	0	87.5
Total	N/A	N/A	234	211	23	0	90.2


Alignments

                                      <FR1-IMGT><----------CDR1-IMGT---------><--------------------FR2-IMGT---------------------
                                        T  V  P  G  G  S  M  R  S  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  S
                    Query_4918   26   CACTGTCCCTGGTGGCTCTATGAGGAGTAGTACTTATTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGAG  115
V  90.2% (211/234)  IGHV4-39*01  66   .......T..........C..C..C.......G...C...................................G.................  155
                                        T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  S

                                      ><-----CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-------
                                        A  Y  Y  T  G  S  T  Y  Y  H  S  S  L  E  S  R  V  T  I  S  V  D  T  S  R  R  Q  F  S  L
                    Query_4918   116  TGCCTATTATACTGGGAGCACGTACTATCACTCGTCCCTCGAGAGTCGAGTCACCATATCCGTAGACACGTCCAGGAGGCAGTTCTCCCT  205
V  90.2% (211/234)  IGHV4-39*01  156  .AT........G.........C.....CA..C........A.................................A..AC...........  245
                                        I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L

                                      ---------------------------------------------><-----------CDR3-IMGT----------->           
                                        K  L  R  A  V  T  A  A  D  T  A  V  Y  Y  C  V  R  Q  G  G  R  W  D  T  D  I  W  G  Q  G
                    Query_4918   206  GAAGCTGCGTGCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGTGAGACAGGGAGGTCGATGGGACACGGACATATGGGGCCAGGG  295
V  90.2% (211/234)  IGHV4-39*01  246  .......A.CT...............................C....C......------------------------------------  299
                                        K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                                       
D  100.0% (5/5)     IGHD1-26*01  8    ----------------------------------------------------------------.....---------------------  12
J  94.1% (32/34)    IGHJ4*02     15   -------------------------------------------------------------------------------...........  25

                                                             
                                        T  L  V  I  V  S  S  
                    Query_4918   296  AACCCTGGTCATCGTCTCGTCAG  318
J  94.1% (32/34)    IGHJ4*02     26   ...........C......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_194727

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_4919   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_4919   91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_4919   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_4919   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_318216

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD3-3*01                                                                                            18.0    0.59 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGCCTCGTGCCTG	GGAGTGGTT	TTGAGGCTATTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGCCTCGTGCCTGGGAGTGGTTTTGAGGCTATTCCTGACTAC	AKSLVPGSGFEAIPDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4920   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTTAGTAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-23*01  47   ............................T..............C.............G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  G  I  T  G  S  G  D  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4920   91   AGTGGCTCTCAGGTATTACTGGCAGTGGTGATAACACCTACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (236/248)  IGHV3-23*01  137  .....G......C.....G...T.......G..G...A....................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  S  L  V  P  G  S  G  
                    Query_4920   181  AGAACACGCTGTATCTGCAAATAAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAAAAGCCTCGTGCCTGGGAGTGGTT  270
V  95.2% (236/248)  IGHV3-23*01  227  ......................G.............................A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD3-3*01   15   ---------------------------------------------------------------------------------.........  23

                                      T------------------>                                  
                                      F  E  A  I  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4920   271  TTGAGGCTATTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (41/41)   IGHJ4*02     8    -------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_318217

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           402     3e-114
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATCCAACGGTC	GTGGGAGCCACT	CTCCCCTTTCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATCCAACGGTCGTGGGAGCCACTCTCCCCTTTCTCTTGACTTT	AKSNGRGSHSPLSLDF	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	272	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  S  G  E  S  L  K  I  S  C  E  A  S  G  Y  S  F  T  N  Y
                    Query_4921   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGTCGGGGGAGTCTCTGAAGATCTCCTGTGAGGCTTCTGGGTACAGCTTTACCAATTA  90
V  94.8% (272/287)  IGHV5-51*03  6    ..............................A...C..........................A...G......A.............GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_4921   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGATTCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  94.8% (272/287)  IGHV5-51*03  96   ...................................................GA.......................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  R  S  L  K  A  S  D  P  A
                    Query_4921   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGCGCAGCCTGAAGGCCTCGGACCCCGC  270
V  94.8% (272/287)  IGHV5-51*03  186  ...............G............................G...................A....................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        M  Y  F  C  A  K  S  N  G  R  G  S  H  S  P  L  S  L  D  F  W  G  Q  G  T  L  V  T  V  S
                    Query_4921   271  CATGTATTTCTGTGCGAAATCCAACGGTCGTGGGAGCCACTCTCCCCTTTCTCTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTC  360
V  94.8% (272/287)  IGHV5-51*03  276  ........A........-------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                           
D  91.7% (11/12)    IGHD1-26*01  7    -----------------------------........T...-------------------------------------------------  18
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------------------------......AC.............................  43

                                           
                                        S  
                    Query_4921   361  CTCAG  365
J  95.2% (40/42)    IGHJ4*02     44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_184958

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           371     7e-105
IGHD3-22*01                                                                                           39.1    3e-07 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GTTGCA	GTATAACTATCATAGTAGTGGTTATT	GGTATTCAGACTCCAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGTTGCAGTATAACTATCATAGTAGTGGTTATTGGTATTCAGACTCCAGTGACTAC	ARLQYNYHSSGYWYSDSSDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	242	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4922   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  98.0% (242/247)  IGHV3-74*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  T  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4922   91   TATGGGTCTCACGTATTAATAGTGATGGGAGCACCACAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.0% (242/247)  IGHV3-74*01  137  .G.............................T.G.....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  L  Q  Y  N  Y  H  S  
                    Query_4922   181  AGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGGTTGCAGTATAACTATCATAGTA  270
V  98.0% (242/247)  IGHV3-74*01  227  ...................................................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.3% (24/26)    IGHD3-22*01  1    -------------------------------------------------------------------------....T.....G......  17

                                      R3-IMGT------------------------>                                  
                                      S  G  Y  W  Y  S  D  S  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4922   271  GTGGTTATTGGTATTCAGACTCCAGTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  92.3% (24/26)    IGHD3-22*01  18   .........---------------------------------------------------------  26
J  100.0% (41/41)   IGHJ4*02     8    -------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_318215

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           319     2e-89
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  A  R  Q  P  P  G  K  G  L  E 
                    Query_4923   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGCCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  91.8% (224/244)  IGHV4-59*08  49   ..................A............G......C.G..G................AT...G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  T  P  N  N  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_4923   91   TGGATTGAGTATATCTACTACAGAGGGACTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGATATCAGTAGACACGTCCAAGAAC  180
V  91.8% (224/244)  IGHV4-59*08  139  .......G.........T.....T....GCA.....T...................T........C........................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_4923   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  91.8% (224/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  90.0% (45/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  P  V  S  S 
                    Query_4923   271  GCCGTCTGGGGCCAAGGGACCCCGGTCCCCGTCTCGTCA  309
J  90.0% (45/50)    IGHJ6*02     24   .A...................A.....A.......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_318212

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            327     9e-92
IGHD3-22*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAGG	ATTACTTTGATAGGAGT	CGTCACGACGAATT	CGGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCAGGATTACTTTGATAGGAGTCGTCACGACGAATTCGGTCTGGACGTC	ARDQDYFDRSRHDEFGLDV	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	24	22	22	0	0	100
CDR1-IMGT	25	51	27	20	7	0	74.1
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <------FR1-IMGT------><--------CDR1-IMGT--------><--------------------FR2-IMGT------------
                                        S  L  T  C  A  V  S  G  D  S  L  S  G  D  N  W  W  S  W  V  R  Q  P  P  G  K  G  L  E  W
                    Query_4924   3    GTCCCTCACCTGCGCTGTCTCTGGTGACTCCCTCAGTGGCGATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTG  92
V  93.0% (226/243)  IGHV4-4*02   54   ..........................G....A....CA.TAG................................................  143
                                        S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L  E  W

                                      ---------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IM
                                        I  G  E  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  A  I  I  S  I  D  K  S  N  K  Q
                    Query_4924   93   GATTGGGGAAGTCTATGATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGCCATCATATCAATAGACAAGTCCAACAAACA  182
V  93.0% (226/243)  IGHV4-4*02   144  ..........A.....C..........................................T..C.......G.............G..C..  233
                                        I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N  Q

                                      GT----------------------------------------------------><-----------------------CDR3-IMGT--
                                        F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  D  Y  F  D  R  S  R  H
                    Query_4924   183  GTTCTCCCTAAAACTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGACCAGGATTACTTTGATAGGAGTCGTCA  272
V  93.0% (226/243)  IGHV4-4*02   234  .........G..G....G.............................................---------------------------  296
                                        F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                              
D  88.2% (15/17)    IGHD3-22*01  3    --------------------------------------------------------------------......A......T...-----  19

                                      --------------------->                                 
                                        D  E  F  G  L  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_4924   273  CGACGAATTCGGTCTGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  327
J  95.7% (44/46)    IGHJ6*02     17   ---------....A.......................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_318213

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           343     2e-96
IGHD3-3*01                                                                                            14.1    8.0  
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACACCTGGTTCTACCCC	ARGVGNTWFYP	239	271	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	28	28	0	0	100
CDR1-IMGT	29	52	24	23	1	0	95.8
FR2-IMGT	53	103	51	48	3	0	94.1
CDR2-IMGT	104	124	21	21	0	0	100
FR3-IMGT	125	238	114	106	8	0	93
CDR3-IMGT (germline)	239	243	5	5	0	0	100
Total	N/A	N/A	243	231	12	0	95.1


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        T  L  S  L  T  C  T  V  S  G  G  C  I  S  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E
                    Query_4925   1    GACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTGCATCAGTAGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGA  90
V  95.1% (231/243)  IGHV4-59*01  48   ...................................C....................G.................................  137
                                        T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E

                                      ------------><-----CDR2-IMGT-----><----------------------------------------------------FR3
                                        W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  T
                    Query_4925   91   ATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAGAC  180
V  95.1% (231/243)  IGHV4-59*01  138  G.........T.......................A..........C.................C....................C....A  227
                                        W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N

                                      -IMGT----------------------------------------------------><-----------CDR3-IMGT-----------
                                        Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  T  W  F  Y  P
                    Query_4925   181  CCAGTTCTCCCTGAAGCTAAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACACCTGGTTCTACCC  270
V  95.1% (231/243)  IGHV4-59*01  228  ..................G...........C..T.............................---------------------------  290
                                        Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                              
D  100.0% (7/7)     IGHD3-3*01   15   ----------------------------------------------------------------.......-------------------  21
J  94.1% (48/51)    IGHJ5*02     1    --------------------------------------------------------------------------...A.......G....  16

                                      >                                  
                                        L  G  Q  G  T  L  V  T  V  S  S  
                    Query_4925   271  CTTGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  305
J  94.1% (48/51)    IGHJ5*02     17   ..G................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_318210

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           315     5e-88
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TCCGTGCA	TATTACTTTGATAGGAGT	CCCCGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCCGTGCATATTACTTTGATAGGAGTCCCCGGGACTAC	VRAYYFDRSPRDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  S  S  D  F  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4926   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTCCAGTGACTTTAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  91.4% (222/243)  IGHV3-21*01  47   ....................G..................T....AG..A....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  S  S  G  T  Y  I  Y  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  A  
                    Query_4926   91   AGTGGGTCTCATCCATAACTAGTAGTGGTACTTACATATACTACGCAGACTCAGTGACGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  91.4% (222/243)  IGHV3-21*01  137  ................T.G.......A...G..........................A......A.........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      R  N  S  M  S  L  Q  M  N  S  L  T  V  D  D  T  A  I  Y  Y  C  V  R  A  Y  Y  F  D  R  S  
                    Query_4926   181  GGAACTCTATGTCTCTGCAAATGAACAGCCTGACAGTCGACGACACGGCTATCTATTACTGTGTCCGTGCATATTACTTTGATAGGAGTC  270
V  91.4% (222/243)  IGHV3-21*01  227  A......AC...A....................G..C...G.........G.G..........---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  88.9% (16/18)    IGHD3-22*01  2    -----------------------------------------------------------------------.......A......T...-  19

                                      ---------->                                  
                                      P  R  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4926   271  CCCGGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (40/40)   IGHJ4*02     9    -----........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_160573

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           396     2e-112
IGHD3-16*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGTCG	ATGACTACGTT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGTCGATGACTACGTTTTTGACTAT	AREVDDYVFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  T  V  S  C  K  A  S  G  D  T  F  R  N  N
                    Query_4927   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGACGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAGAAACAA  90
V  93.5% (272/291)  IGHV1-69*01  6    ..................G...............................A.......................G.........C.G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  F  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  M  F  G  T  V  N  Y  A  Q
                    Query_4927   91   TGCTTTCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATGTTTGGAACAGTCAACTACGCACA  180
V  93.5% (272/291)  IGHV1-69*01  96   ....A...G.........................................................C.....T....CA...........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  Q  D  R  V  T  I  S  A  D  E  S  T  S  T  A  Y  M  E  L  T  S  L  R  S  D  D  T  A
                    Query_4927   181  GAACTTCCAGGACAGAGTCACGATTTCCGCGGACGAATCTACGAGCACAGCCTACATGGAGCTGACCAGCCTGAGATCTGATGACACGGC  270
V  93.5% (272/291)  IGHV1-69*01  186  ...G.......G.............A.............C.........................G...............G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        V  C  Y  C  A  R  E  V  D  D  Y  V  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4927   271  CGTGTGTTACTGTGCGAGAGAGGTCGATGACTACGTTTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  93.5% (272/291)  IGHV1-69*01  276  .....A...............-----------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                              
D  90.9% (10/11)    IGHD3-16*01  6    --------------------------....T......-------------------------------------------  16
J  97.7% (42/43)    IGHJ4*02     6    -------------------------------------........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_184952

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           339     2e-95
IGHD3-9*01                                                                                            12.2    31   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCAG	N/A	GACTGG	GAAAGACGGACGC	TGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCGCAGGACTGGGAAAGACGGACGCTGACGAC	AAGLGKTDADD	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	255	7	5	2	0	71.4
Total	N/A	N/A	255	236	19	0	92.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  S  D  A  W  M  T  W  L  R  Q  A  P  G  K  G  L  
                    Query_4928   1    GGTCCCTGAGACTCTCCTGTGCAACGTCTGGATTCACTTTCAGTGACGCCTGGATGACCTGGCTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.5% (236/255)  IGHV3-15*01  47   .......T...............G.C..................A............G....G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  I  K  I  H  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  I  I  S  R  D  
                    Query_4928   91   AGTGGGTTGGCCGTATTAAAATCAAAATTCATGGTGAGACAACAGACTACGCTGCTCCCGTAAAAGGCAGATTCATCATCTCAAGAGATG  180
V  92.5% (236/255)  IGHV3-15*01  137  .....................G.....C.G......G..................A.....G.............C..............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  S  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  A  G  L  G  K  T  
                    Query_4928   181  ATTCAAAAAGTACACTGTATCTGCAAATGAACAGCCTGAAGACCGAGGACACAGCCGTGTATTACTGTGCCGCAGGACTGGGAAAGACGG  270
V  92.5% (236/255)  IGHV3-15*01  227  .........AC..G..........................A...........................A..A...---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (6/6)     IGHD3-9*01   16   ---------------------------------------------------------------------------......---------  21

                                      ---------->                                  
                                      D  A  D  D  G  G  Q  G  T  L  V  T  V  S  S  
                    Query_4928   271  ACGCTGACGACGGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  95.1% (39/41)    IGHJ4*02     8    ----....T..T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_184950

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           274     8e-76
IGHD3-22*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAC	ATAGTACTGG	CCGAATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATAGTACTGGCCGAATCATTGACTAT	ARAHSTGRIIDY	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	22	8	0	73.3
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	99	15	0	86.8
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	212	37	0	85.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G  
                    Query_4929   4    CCCTGAGACTCTCCTGTAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCAGGGAAGGGCC  93
V  85.1% (212/249)  IGHV4-31*02  50   .....TCC...A......C................A...G.A....TGG..A...C....G.............CA..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  M  G  Y  I  Y  H  V  E  S  T  S  R  N  P  S  L  K  S  Q  L  T  I  S  L  D  P  S  
                    Query_4929   94   TGGAGTGGATGGGATACATCTATCACGTTGAGAGCACCTCCCGCAACCCGTCCCTCAAGAGTCAACTTACCATTTCACTCGACCCGTCTA  183
V  85.1% (212/249)  IGHV4-31*02  140  ..........T..G.........T..AG..G........A.TA....................G.G.......A...G.A...A......  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  S  Q  F  S  L  K  L  A  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  S  T  G  R  I  
                    Query_4929   184  AGAGCCAGTTCTCCCTAAAACTGGCCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCACATAGTACTGGCCGAATCA  273
V  85.1% (212/249)  IGHV4-31*02  230  ...A............G..G...AG....G.......................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-22*01  12   ------------------------------------------------------------------------......G...--------  21

                                      ------->                                  
                                      I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4929   274  TTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ4*02     7    .......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_184957

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           333     1e-93
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACAAGGGGATAA	CTATAGTTAC	GAATCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACAAGGGGATAACTATAGTTACGAATCT	AQGDNYSYES	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	241	2	2	0	0	100
Total	N/A	N/A	241	227	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  W  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4930   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTTGGAACTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.2% (227/241)  IGHV3-53*01  47   ............................................A.C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  A  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  K  
                    Query_4930   91   AGTGGGTCTCAGTCATTTATGCCGGTGGTAGCACATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  94.2% (227/241)  IGHV3-53*01  137  .............T......AG...............C..C........................................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------CDR3-IMGT---------> 
                                      K  V  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  Q  G  D  N  Y  S  Y  E  S  
                    Query_4930   181  AAGTGTTGTATCTTCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCACAAGGGGATAACTATAGTTACGAATCTT  270
V  94.2% (227/241)  IGHV3-53*01  227  .CAC.C.............G.........................................-----------------------------  287
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  90.0% (9/10)     IGHD5-18*01  11   -------------------------------------------------------------------------....G.....-------  20
J  97.1% (33/34)    IGHJ4*02     15   -----------------------------------------------------------------------------------------.  15

                                                                       
                                      W  G  R  G  T  L  V  T  V  S  S  
                    Query_4930   271  GGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  303
J  97.1% (33/34)    IGHJ4*02     16   ......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_184954

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           321     6e-90
IGHD2-21*02                                                                                           18.0    0.57 
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAGTCTGGGCCA	GGTGGTGAC	A	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGAGTCTGGGCCAGGTGGTGACATCGACCTC	ARHESGPGGDIDL	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	228	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  A  H  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_4931   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTGCTCACTACTGGGGCTGGATCCGCCAGCCCCCCGGGAAGGGG  90
V  90.8% (228/251)  IGHV4-39*01  49   ................................................AG.T............................A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  I  I  Y  H  N  T  S  L  K  S  R  V  A  M  S  V  D  T  S 
                    Query_4931   91   CTGGAGTGGATTGGCAGTATATATTATAGTGGGATCATCTACCACAACACGTCCCTCAAGAGTCGAGTCGCCATGTCTGTTGACACGTCC  180
V  90.8% (228/251)  IGHV4-39*01  139  ..............G.....C.............G..C....T.....C....................A....A..C..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  L  L  S  L  N  L  D  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  H  E  S  G  P  G  G 
                    Query_4931   181  AAGAACTTGCTCTCCCTGAACCTGGACTCTGTGACCGCCGCAGACACGGCTCTATATTATTGTGCGAGACATGAGTCTGGGCCAGGTGGT  270
V  90.8% (228/251)  IGHV4-39*01  229  ......CA.T..........G...AG.........................G.G.....C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD2-21*02  11   ------------------------------------------------------------------------------------......  16

                                      ----------->                                  
                                       D  I  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4931   271  GACATCGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (9/9)     IGHD2-21*02  17   ...-------------------------------------------  19
J  97.6% (41/42)    IGHJ5*02     10   ----......C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_184955

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           442     2e-126
IGHD3-3*01                                                                                            41.1    8e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACGCCT	CGATTTTTGGAGTGGTTATTGTAC	GAGAATCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTAC	ARYASIFGVVIVRESFDY	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	286	3	0	99


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  G  S  G  Y  S  F  T  S  Y
                    Query_4932   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAGGGGTTCTGGATACAGCTTTACCAGCTA  90
V  99.0% (286/289)  IGHV5-51*01  6    ..............................................................A...........................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_4932   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACTAGATACAGCCC  180
V  99.0% (286/289)  IGHV5-51*01  96   ............................................................T.................C...........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4932   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  99.0% (286/289)  IGHV5-51*01  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  Y  A  S  I  F  G  V  V  I  V  R  E  S  F  D  Y  W  G  Q  G  T  L  V  T
                    Query_4932   271  CATGTATTACTGTGCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTACTGGGGCCAGGGAACCCTGGTCAC  360
V  99.0% (286/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  95.8% (23/24)    IGHD3-3*01   7    --------------------------....................A...----------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    ----------------------------------------------------------................................  37

                                                 
                                        V  S  S  
                    Query_4932   361  CGTCTCCTCAG  371
J  100.0% (43/43)   IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_185916

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           305     3e-85
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTGG	AGCAGTGGCTGGT	CGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTGGAGCAGTGGCTGGTCGGTTTGACTTC	AREGGAVAGRFDF	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	223	28	0	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  R  G  S  V  S  S  G  G  Y  R  W  S  W  I  R  Q  T  P  G  R  G 
                    Query_4933   1    ACCCTGTCCCTCACCTGCTCTGTCTCTCGTGGCTCCGTCAGCAGTGGGGGTTATCGCTGGTCCTGGATCCGGCAGACCCCAGGCAGGGGA  90
V  88.8% (223/251)  IGHV4-61*08  49   ..................A........G...................T.....CTA....AG.............C.......G.A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  F  T  G  T  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  A  D  M  S 
                    Query_4933   91   CTGGAGTGGATTGGCTATATCCACTTCACTGGGACCACCAAGTACAACCCCTCCCTTAAGAGTCGAGTCAGCATATCAGCAGACATGTCC  180
V  88.8% (223/251)  IGHV4-61*08  139  ..............G......T.T.A..G.....G......C..............C.............C........T.....C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  A  V  A  G 
                    Query_4933   181  AAGAACCAATTCTCCCTGAACCTGAGGTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTGCGAGAGAGGGTGGAGCAGTGGCTGGT  270
V  88.8% (223/251)  IGHV4-61*08  229  ........G...........G.....C..........................G..T..C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD6-19*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------->                                  
                                       R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4933   271  CGGTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02     6    ---.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_241796

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         294     6e-82
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	GGAGTCGTAATTAT	CATGGGAATTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGAGTCGTAATTATCATGGGAATTTCTACTTCGACCAC	ARGSRNYHGNFYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  D  S  V  Y  Y  S  L  N  W  I  R  Q  T  P  L  K  G 
                    Query_4934     1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCATCGACAGCGTTTACTACTCCTTAAACTGGATCCGGCAGACACCACTGAAGGGC  90
V  87.6% (219/250)  IGHV4-30-2*01  49   .......................C...............AG...T.G.GGT.......GG.G.............C.....GG.......  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Q  H  S  G  A  T  Y  Y  N  P  S  L  E  S  R  V  S  L  S  V  D  R  S 
                    Query_4934     91   CTGGAGTGGATTGGCTACATCCAGCATTCTGGGGCCACCTACTACAACCCGTCCCTCGAGAGTCGGGTCTCCCTTTCAGTAGACCGGTCC  180
V  87.6% (219/250)  IGHV4-30-2*01  139  ..............G......T.T...AG....AG......................A.......A...A..A.A.........A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  S  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  R  N  Y  H  G 
                    Query_4934     181  AAGAGCCAGTTCTCCCTGAGGCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGAGGGAGTCGTAATTATCATGGG  270
V  87.6% (219/250)  IGHV4-30-2*01  229  ....A..............A.....G...........................G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  85.7% (12/14)    IGHD3-3*01     15   ----------------------------------------------------------------------.....G..T.....------  28

                                        ----------------->                                  
                                         N  F  Y  F  D  H  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_4934     271  AATTTCTACTTCGACCACTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTCAG  322
J  91.5% (43/47)    IGHJ4*02       2    -----......T...T...............C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_109604

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     4e-93
IGHD1-26*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGTGAGA	GGGAGCTA	TTGTGGGGAGCAGTCAACGAGGATTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGTGAGAGGGAGCTATTGTGGGGAGCAGTCAACGAGGATTGCTTTGACTCC	ARDSERELLWGAVNEDCFDS	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  I  N  H  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_4935   1    GGTCCCTGAGACTCTCCTGTGCAGCATCTGGACTCACCTTTATCAACCATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-23*01  47   .........................C......T.........G..G.T.........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  
                    Query_4935   91   AGTGGGTCTCGAGTATAAGTGGTAGTGGTGGTAGCACATACTACGCAGATTCCGTCAAGGGCCGGTTCACCATCTCCAGAGACATTTCCA  180
V  92.4% (231/250)  IGHV3-23*01  137  ..........AGC...T................................C.....G............................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  R  T  M  Y  L  Q  M  N  S  L  R  D  D  D  T  A  V  Y  Y  C  A  R  D  S  E  R  E  L  L  
                    Query_4935   181  AGAGGACGATGTATCTGCAAATGAACAGCCTGAGAGACGACGACACGGCCGTATATTACTGTGCGAGAGATAGTGAGAGGGAGCTATTGT  270
V  92.4% (231/250)  IGHV3-23*01  227  ...AC...C...........................C...G.........................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD1-26*01  9    ------------------------------------------------------------------------------........----  16

                                      R3-IMGT------------------------>                                
                                      W  G  A  V  N  E  D  C  F  D  S  W  G  Q  G  S  L  V  T  V  S  S
                    Query_4935   271  GGGGAGCAGTCAACGAGGATTGCTTTGACTCCTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTC  334
J  95.2% (40/42)    IGHJ4*02     5    ----------------------........A..............C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_273241

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           343     2e-96
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGGTTT	TAGTAGTGCTTATTACT	GGCTTAAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGTTTTAGTAGTGCTTATTACTGGCTTAATTACTTTGACTGC	AKGFSSAYYWLNYFDC	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4936   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAATTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (233/247)  IGHV3-23*01  47   ..........................................G..GC..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  A  G  T  N  T  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_4936   91   AGTGGGTCTCAGGTATTAGTGGTGCTGGTACTAACACATACTACGCAGACTCCGTGCAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.3% (233/247)  IGHV3-23*01  137  ............C..........AG....GG..G......................A.................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  G  F  S  S  A  Y  Y  
                    Query_4936   181  AGAACACGCTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTTCTGTGCGAAGGGTTTTAGTAGTGCTTATTACT  270
V  94.3% (233/247)  IGHV3-23*01  227  ............A.......................................A....A.........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.1% (16/17)    IGHD3-22*01  13   -------------------------------------------------------------------------........G........  29

                                      T------------------>                                  
                                      W  L  N  Y  F  D  C  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_4936   271  GGCTTAATTACTTTGACTGCTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  324
J  95.7% (44/46)    IGHJ4*02     3    --------..........A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_273240

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-6*01                                                                                            14.1    8.3  
IGHJ3*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-6*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCC	AGTATCGAAGATCGTC	GGCTGGTTTCTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCAGTATCGAAGATCGTCGGCTGGTTTCTCTTGATATC	ARPSIEDRRLVSLDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	216	27	0	88.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  R  G  Y  Y  W  S  W  L  R  Q  S  P  G  K  G  L  Q 
                    Query_4937   1    ACCCTGTCCCTCACCTGCGCTGTTTATGGCGGATCATTCAGGGGCTACTACTGGAGTTGGCTCCGCCAGTCCCCAGGGAAGGGGCTGCAG  90
V  88.9% (216/243)  IGHV4-34*01  49   .......................C.....T..G..C.....T..T...........C...A........C.................G..  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  R  G  I  T  N  Y  I  P  S  L  K  S  R  L  T  M  S  V  D  T  S  K  N 
                    Query_4937   91   TGGATTGGAGAAATCAATCACAGAGGGATCACCAATTACATCCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACACCTCCAAGAAT  180
V  88.9% (216/243)  IGHV4-34*01  139  ........G...........T..T..A.G......C....A...................G.......A...........G........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  S  I  E  D  R  R  L  V 
                    Query_4937   181  CAATTCTCCCTGAAACTTAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGACCCAGTATCGAAGATCGTCGGCTGGTT  270
V  88.9% (216/243)  IGHV4-34*01  229  ..G...........G..G..C.......................T..G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  81.2% (13/16)    IGHD6-6*01   2    ------------------------------------------------------------------.....A.C..C.....--------  17

                                      ----------->                                  
                                       S  L  D  I  W  G  Q  G  T  M  V  V  V  S  S  
                    Query_4937   271  TCTCTTGATATCTGGGGCCAAGGGACAATGGTCGTTGTCTCTTCAG  316
J  92.9% (39/42)    IGHJ3*02     9    ----.............................ACC..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_273243

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD6-25*01                                                                                           14.1    9.4   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGGATGGACGTC	ARQSSAGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  S  S  G  Y  D  F  L  D  Y
                    Query_4938   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGAGTTCTGGATACGACTTTCTCGACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ..............................A.....C...........................G...........AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_4938   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G.......................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4938   181  GTCATTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGAACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  ...C.........................................C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  M  V  T  V  S  S
                    Query_4938   271  CAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGGATGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTC  360
V  95.2% (277/291)  IGHV5-51*01  276  ..T..................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  95.8% (46/48)    IGHJ6*02     15   -------------------------------------------.....T.........................C...............  61

                                       
                                       
                    Query_4938   361  A  361
J  95.8% (46/48)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_332383

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           424     8e-121
IGHD3-9*01                                                                                            23.8    0.012 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCACT	TTACAATATTTTGAC	ACATTACCAACCTC	TGAGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCACTTTACAATATTTTGACACATTACCAACCTCTGAGTAC	ARATLQYFDTLPTSEY	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	74	1	0	98.7
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	19	5	0	79.2
FR3-IMGT	176	289	114	112	2	0	98.2
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	283	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  N  V  S  C  K  A  S  G  Y  S  F  T 
                    Query_4939   2    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAACGTCTCCTGCAAGGCTTCTGGTTACAGCTTTACC  91
V  95.9% (283/295)  IGHV1-18*04  1    ........................................................G.........................C.......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  D  W  M  G  W  V  S  A  N  N  G  K  T  N  Y 
                    Query_4939   92   AGGTACGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGACTGGATGGGATGGGTCAGCGCAAACAATGGTAAAACGAACTAT  181
V  95.9% (283/295)  IGHV1-18*04  91   ..C....G.......................................G............A.......TT..........C..A......  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       V  Q  K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_4939   182  GTACAGAAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  271
V  95.9% (283/295)  IGHV1-18*04  181  .C.......C................................................................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  A  T  L  Q  Y  F  D  T  L  P  T  S  E  Y  W  G  Q  G  T  L  V  T 
                    Query_4939   272  ACGGCCGTGTATTACTGTGCGAGAGCCACTTTACAATATTTTGACACATTACCAACCTCTGAGTACTGGGGCCAGGGAACCCTGGTTACC  361
V  95.9% (283/295)  IGHV1-18*04  271  .........................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  93.3% (14/15)    IGHD3-9*01   4    ------------------------------....G..........---------------------------------------------  18
J  95.1% (39/41)    IGHJ4*02     8    -----------------------------------------------------------...C.......................C...  38

                                                
                                       V  S  S  
                    Query_4939   362  GTCTCCTCAG  371
J  95.1% (39/41)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_273245

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           400     9e-114
IGHD5-12*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTAAACGAAA	ATAGTGGCTACGATTA	TGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTAAACGAAAATAGTGGCTACGATTATGCTGACTAC	ARLNENSGYDYADY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	272	16	0	94.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  A  S  Y 
                    Query_4940   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTGCCAGCTAC  91
V  94.4% (272/288)  IGHV1-18*04  7    ............................................................................C....A........  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  F  S  T  Y  N  G  D  T  N  Y  A  Q 
                    Query_4940   92   TCTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGTCTTGAGTGGATGGGACGGTTCAGCACTTACAATGGTGACACAAATTATGCACAG  181
V  94.4% (272/288)  IGHV1-18*04  97   GG.A...............................G...............T..A.....G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_4940   182  AACCTCCAGGGCAGAGTCACCCTGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTTAGATCTGACGACACGGCC  271
V  94.4% (272/288)  IGHV1-18*04  187  ..G..................A.................................................G..................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                
                                       V  Y  Y  C  A  R  L  N  E  N  S  G  Y  D  Y  A  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4940   272  GTTTATTATTGTGCGAGATTAAACGAAAATAGTGGCTACGATTATGCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  357
V  94.4% (272/288)  IGHV1-18*04  277  ..G.....C.........--------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                     
D  100.0% (16/16)   IGHD5-12*01  7    ----------------------------................------------------------------------------  22
J  100.0% (39/39)   IGHJ4*02     8    -----------------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_332385

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATTTGCTGA	TTCGGGGA	TTGAAAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGTC	AKFADSGIETYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	275	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  S  F
                    Query_4941   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTATCAGCTT  90
V  95.8% (275/287)  IGHV5-51*01  6    ...................................................................................C.....A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  V  P  G  K  G  L  E  C  L  G  I  I  D  P  R  D  S  D  T  T  Y  S  P
                    Query_4941   91   CTGGATCGCCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGCTTGGGGATCATCGATCCTCGTGACTCTGATACCACATACAGCCC  180
V  95.8% (275/287)  IGHV5-51*01  96   ........G.............A......................GA...........T.....G...............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  T  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4941   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.8% (275/287)  IGHV5-51*01  186  .............................C...........T................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  K  F  A  D  S  G  I  E  T  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_4941   271  CATGTATTATTGTGCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTC  360
V  95.8% (275/287)  IGHV5-51*01  276  .........C.......-------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                           
D  100.0% (8/8)     IGHD3-10*01  13   ---------------------------........-------------------------------------------------------  20
J  98.0% (48/49)    IGHJ6*02     14   ------------------------------------------.............................................C..  61

                                       
                                       
                    Query_4941   361  A  361
J  98.0% (48/49)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_273247

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           319     2e-89
IGHD1-26*01                                                                                           10.3    119  
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCGCAGAGAGAGGAAGGCC	TGGGA	C	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCGCAGAGAGAGGAAGGCCTGGGACCTGGTTCGACCCC	ARAAERGRPGTWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  Y  Y  W  H  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4942   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGCACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.1% (223/242)  IGHV4-59*08  49   ...................C..................................AG..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  Y  S  G  V  T  D  S  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  S  N 
                    Query_4942   91   TGGATTGGCCACATCTATTACAGTGGGGTCACCGACTCCAACCCCTCCCTCAAGGGTCGAGTCACCATATCAGTAGACACTTCCAGCAAC  180
V  92.1% (223/242)  IGHV4-59*08  139  ........GT.T...............AG....A...A................A.........................G....AG...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  A  E  R  G  R  P  G  T 
                    Query_4942   181  CAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCAGACACGGCTGTCTATTATTGTGCGAGGGCCGCAGAGAGAGGAAGGCCTGGGACC  270
V  92.1% (223/242)  IGHV4-59*08  229  .............A......C.......................C..G.....C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  8    -----------------------------------------------------------------------------------.....--  12
J  97.9% (46/47)    IGHJ5*02     5    -----------------------------------------------------------------------------------------.  5

                                      ----------->                                  
                                       W  F  D  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_4942   271  TGGTTCGACCCCTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.9% (46/47)    IGHJ5*02     6    ...................A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_273246

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           350     8e-99
IGHD7-27*01                                                                                           14.1    8.2  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGTATCGACT	CTGGGGA	N/A	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGTATCGACTCTGGGGAACAACTGGTTCGACCCC	ARQVSTLGNNWFDP	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  R  D  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_4943   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTCGTGACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  95.9% (234/244)  IGHV4-59*08  50   .....TCC...A.............................A..T.............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N  
                    Query_4943   94   GGATTGGGTATATCTATTACAGTGGGAACACCTACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAACC  183
V  95.9% (234/244)  IGHV4-59*08  140  ...........................G....A.............................................C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  V  S  T  L  G  N  N  W  
                    Query_4943   184  AGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACAAGTATCGACTCTGGGGAACAACTGGT  273
V  95.9% (234/244)  IGHV4-59*08  230  ..............C.................................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (7/7)     IGHD7-27*01  5    --------------------------------------------------------------------------.......---------  11
J  100.0% (51/51)   IGHJ5*02     1    ---------------------------------------------------------------------------------.........  9

                                      ------->                                  
                                      F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4943   274  TCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (51/51)   IGHJ5*02     10   ..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_332388

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           377     9e-107
IGHD3-3*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTAAA	ACGATTTTTGGAGTGGTTAT	CCATTTGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTAAAACGATTTTTGGAGTGGTTATCCATTTGGGCTACTTTGACTAC	AKVKTIFGVVIHLGYFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	245	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4944   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (245/249)  IGHV3-23*01  47   .....................C....................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  D  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4944   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGATAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  98.4% (245/249)  IGHV3-23*01  137  ..............................G...........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  V  K  T  I  F  G  V  
                    Query_4944   181  AGAACACCCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTTAAAACGATTTTTGGAGTGG  270
V  98.4% (245/249)  IGHV3-23*01  227  .......G....A........................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (20/20)   IGHD3-3*01   6    --------------------------------------------------------------------------................  21

                                      IMGT--------------------->                                  
                                      V  I  H  L  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4944   271  TTATCCATTTGGGCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (20/20)   IGHD3-3*01   22   ....--------------------------------------------------------  25
J  100.0% (47/47)   IGHJ4*02     2    -------------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_332389

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           338     4e-95
IGHD3-16*01                                                                                           14.1    7.8  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCC	GTATTAT	CGC	ATCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCCCGTATTATCGCATC	TRGPYYRI	240	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	50	1	0	98
CDR2-IMGT	102	125	24	23	1	0	95.8
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	232	224	8	0	96.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 
                    Query_4945   15   TGTGCAGCCTCTGGATTCACCTTCAGTAACTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAATGGGTTTCATACATT  104
V  96.6% (224/232)  IGHV3-48*03  64   ............................GT............................................G...............  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  S  G  S  P  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_4945   105  AGTAGTAGTGGTAGTCCCATATATTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTG  194
V  96.6% (224/232)  IGHV3-48*03  154  ...............A.......C..................................................................  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------CDR3-IMGT------>                     
                                       Q  T  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  G  P  Y  Y  R  I  W  G  Q  G  T  M  V 
                    Query_4945   195  CAAACTAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTACGAGAGGCCCGTATTATCGCATCTGGGGCCAAGGGACAATGGTC  284
V  96.6% (224/232)  IGHV3-48*03  244  ....TG.......................................G......--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (7/7)     IGHD3-16*01  1    --------------------------------------------------------.......---------------------------  7
J  100.0% (36/36)   IGHJ3*02     14   ------------------------------------------------------------------........................  37

                                                  
                                       T  V  S  S 
                    Query_4945   285  ACCGTCTCTTCA  296
J  100.0% (36/36)   IGHJ3*02     38   ............  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_304259

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           352     3e-99
IGHD6-19*01                                                                                           21.8    0.043
IGHJ3*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGGAGAGGGGGGATATTACG	GTGGCTGGTAC	TTAGGCCCGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGAGAGGGGGGATATTACGGTGGCTGGTACTTAGGCCCGAATGCTTATGATTTC	AKGEGGYYGGWYLGPNAYDF	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	236	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  P  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_4946   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCGACTATCCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.5% (236/247)  IGHV3-23*01  47   ............................................AG....G.......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  V  S  V  I  S  G  S  G  D  S  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4946   91   AGTGTGTCTCCGTTATTAGTGGTAGTGGTGACAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.5% (236/247)  IGHV3-23*01  137  ....G.....A.C.................GT......T...................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  G  E  G  G  Y  Y  G  
                    Query_4946   181  AGAACACGCTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAAGGGAGAGGGGGGATATTACGGTG  270
V  95.5% (236/247)  IGHV3-23*01  227  ............A............................................A.........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD6-19*01  11   ---------------------------------------------------------------------------------------...  13

                                      R3-IMGT------------------------>                                  
                                      G  W  Y  L  G  P  N  A  Y  D  F  W  G  Q  G  T  M  V  S  V  S  S  
                    Query_4946   271  GCTGGTACTTAGGCCCGAATGCTTATGATTTCTGGGGCCAAGGGACAATGGTCTCCGTCTCTTCAG  336
D  100.0% (11/11)   IGHD6-19*01  14   ........----------------------------------------------------------  21
J  93.8% (45/48)    IGHJ3*01     3    ------------------......T....G.......................A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_304258

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           363     1e-102
IGHD3-10*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCATA	GGGAGTTA	CTG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCATAGGGAGTTACTG	ARDHRELL	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  A  W  I  R  Q  A  P  G  K  G  L  
                    Query_4947   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGGCCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-11*01  47   ........................................................AG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  H  I  S  S  S  G  G  N  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4947   91   AGTGGATTTCACACATTAGTAGTAGTGGTGGTAACATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  96.4% (241/250)  IGHV3-11*01  137  .....G.....T.................A...C........................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      K  N  S  L  F  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  H  R  E  L  L  W  
                    Query_4947   181  AGAACTCACTGTTTCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAGAGACCATAGGGAGTTACTGTGGG  270
V  96.4% (241/250)  IGHV3-11*01  227  ............A..........A............................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-10*01  17   ---------------------------------------------------------------------------........-------  24
J  100.0% (34/34)   IGHJ4*02     15   --------------------------------------------------------------------------------------....  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_4947   271  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  300
J  100.0% (34/34)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_181209

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           408     4e-116
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_4948   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.2% (275/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  T  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_4948   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCACCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.2% (275/289)  IGHV5-51*03  96   ........G.......................A.......................T...........A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_4948   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.2% (275/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  G  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4948   271  CGTCTATTACGGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.2% (275/289)  IGHV5-51*03  276  .A.G......T........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_4948   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_181208

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           324     8e-91
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGACA	GTTCGAT	TATTATGA	GGGTTCTACTTACCCAAGA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACAGTTCGATTATTATGAGGGTTCTACTTACCCAAGATACTTTGACTCC	ARQFDYYEGSTYPRYFDS	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  G  F  F  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_4949   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTGGTTTTTTCTGGAGTTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*08  49   ....................................A.....A...AC.A......C......................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  L  V  D  T  S  K  N 
                    Query_4949   91   TGGATTGGGTATATCTTTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGGGTCACCATGTTAGTAGACACGTCCAAGAAT  180
V  92.2% (226/245)  IGHV4-59*08  139  ................A..........................................A........A.C..................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  R  S  M  I  A  S  D  T  A  V  Y  Y  C  A  R  Q  F  D  Y  Y  E  G  S  T 
                    Query_4949   181  CAGTTCTCCCTGAGGCTGAGGTCTATGATCGCCTCAGACACGGCCGTATATTACTGTGCGCGACAGTTCGATTATTATGAGGGTTCTACT  270
V  92.2% (226/245)  IGHV4-59*08  229  .............A......C...G...C....G.............G............A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-16*01  2    ------------------------------------------------------------------------........----------  9

                                      -------------------->                                
                                       Y  P  R  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4949   271  TACCCAAGATACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  323
J  97.7% (43/44)    IGHJ4*02     3    ---------..........A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_55006

Length=420
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           363     2e-102
IGHD2-21*02                                                                                           14.1    10    
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGCAC	TGTAGTGCTGACT	AATAGGCGCGGACTTACGGGGCCAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCGCACTGTAGTGCTGACTAATAGGCGCGGACTTACGGGGCCAGACTACCACTACTACGGCATGGACGTC	ARERTVVLTNRRGLTGPDYHYYGMDV	284	361	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	261	29	0	90


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  T  A  S  G  Y  T  F  C  S  Y 
                    Query_4950   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCACGGCCTCTGGGTACACCTTTTGCAGTTAT  91
V  90.0% (261/290)  IGHV1-18*01  7    .................................................A...........A...T.....T.........AC...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  K  N  G  D  T  K  Y  E  Q 
                    Query_4950   92   AGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCCAAGAACGGAGACACCAAATATGAGCAG  181
V  90.0% (261/290)  IGHV1-18*01  97   G.......C.....................................................TT.C..T..TA....A..C....CA...  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  D  R  I  F  L  T  T  E  T  S  T  S  T  A  Y  M  E  V  T  S  L  R  S  D  D  T  A 
                    Query_4950   182  AAGTTCCAGGACAGAATCTTCCTGACCACAGAGACATCCACGAGCACAGCCTACATGGAGGTGACGAGCCTGAGATCTGACGACACGGCC  271
V  90.0% (261/290)  IGHV1-18*01  187  ...C......G....G..AC.A..........C...........................C...G.........................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------------------CDR3-IMGT--------------------------------->
                                       V  Y  Y  C  A  R  E  R  T  V  V  L  T  N  R  R  G  L  T  G  P  D  Y  H  Y  Y  G  M  D  V 
                    Query_4950   272  GTCTATTACTGTGCGAGAGAGCGCACTGTAGTGCTGACTAATAGGCGCGGACTTACGGGGCCAGACTACCACTACTACGGCATGGACGTC  361
V  90.0% (261/290)  IGHV1-18*01  277  ..G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  84.6% (11/13)    IGHD2-21*02  8    --------------------------...G...G.....---------------------------------------------------  20
J  94.9% (56/59)    IGHJ6*02     4    ----------------------------------------------------------------.....T..........T.........  29

                                                                       
                                       W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4950   362  TGGGGCCAAGGGACCACTGTCACCGTCTCCTCA  394
J  94.9% (56/59)    IGHJ6*02     30   .................G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41235264


Query= Query_181207

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           349     2e-98
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TGGAGACC	TTCGGGGAGTTATTAT	TTG	GGGGC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  S  T  F  S  R  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4951   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATCCACGTTTAGTAGATATTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-74*01  47   .................................T...C..C.....C..C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  G  D  G  S  G  T  S  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4951   91   TGTGGGTCTCCCGTATTAACGGTGATGGGAGTGGCACAAGCTCCGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (236/249)  IGHV3-74*01  137  ..........A........TA...........A.........A...............................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT---------------------------------------------------->                            
                                      K  K  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  V  E  T  F  G  E  L  
                    Query_4951   181  AGAAAACACTGTATCTGCAAATGAACAGTCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCAAGAGTGGAGACCTTCGGGGAGTTAT  270
V  94.8% (236/249)  IGHV3-74*01  227  ....C..G............................C................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (16/16)   IGHD3-10*01  13   -----------------------------------------------------------------------------.............  25

                                                                             
                                      L  F  G  G  Q  G  T  L  V  T  V  S  S  
                    Query_4951   271  TATTTGGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
D  100.0% (16/16)   IGHD3-10*01  26   ...------------------------------------  28
J  100.0% (33/33)   IGHJ4*02     16   ------.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_181206

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           339     2e-95
IGHD3-10*01                                                                                           14.1    8.6  
IGHJ5*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	CGGCCCTCGAATCCACA	TATGCTTCGG	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGCGGCCCTCGAATCCACATATGCTTCGGACTGGTTCGACCCC	ATAALESTYASDWFDP	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_4952   4    CCCTGAGACTCTCCTGTAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  93.6% (233/249)  IGHV4-31*02  50   .....TCC...A......C..........................................C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  L  Y  D  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_4952   94   TGGAGTGGATTGGCTACCTCTATGACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGCCGAGTTACCATATCAGTAGACACGTCTA  183
V  93.6% (233/249)  IGHV4-31*02  140  .............G...A.....T.....................................T............................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  N  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  A  A  L  E  S  T  Y  
                    Query_4952   184  AGAACCAGTTCTCCCTGAACCTGACCTCTGTCACTGCCGCGGACACGGCCGTCTATTATTGTGCGACAGCGGCCCTCGAATCCACATATG  273
V  93.6% (233/249)  IGHV4-31*02  230  ...................G....G......G....................G.....C.......G..---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-10*01  8    --------------------------------------------------------------------------------------....  11

                                      T------------------>                                  
                                      A  S  D  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4952   274  CTTCGGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  90.0% (9/10)     IGHD3-10*01  12   G.....------------------------------------------------  17
J  100.0% (48/48)   IGHJ5*02     4    ------................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_181200

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            18.0    0.58 
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGC	TACGATTTT	GGGTCATTGTGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGCTACGATTTTGGGTCATTGTGGTGGTTCGACCCC	ARGRYDFGSLWWFDP	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	24	15	6	3	62.5
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	249	232	14	3	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4953   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCATATTCAGTAACTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-21*01  47   ............................T.......CC.......G......C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  M  S  G  S  S  S     S  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4953   91   AGTGGGTCTCATCCATGAGTGGAAGCAGTAGT---AGTTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  177
V  93.2% (232/249)  IGHV3-21*01  137  ................T...A.T..T......TAC.TA....................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  V  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  R  Y  D  F  G  S  
                    Query_4953   178  AGAACTCACTGGTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGGTCGCTACGATTTTGGGTCAT  267
V  93.2% (232/249)  IGHV3-21*01  227  ...........TA.......................................G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD3-3*01   5    --------------------------------------------------------------------------.........-------  13

                                      ---------------->                                  
                                      L  W  W  F  D  P  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_4953   268  TGTGGTGGTTCGACCCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  97.8% (45/46)    IGHJ5*02     6    -----.........................C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_181203

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	CTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  V  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  T  S
                    Query_4954   1    GCAGCTGGTGCAGTCTGGAGCAGTGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATTCGACTTTACCACCTC  90
V  95.9% (278/290)  IGHV5-51*01  6    .......................A..................................................A.AG........G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_4954   91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  95.9% (278/290)  IGHV5-51*01  96   C......................................................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4954   181  GTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (278/290)  IGHV5-51*01  186  ........................C....C....A..................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_4954   271  CATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  359
V  95.9% (278/290)  IGHV5-51*01  276  ....................---------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (15/15)   IGHD6-19*01  4    ----------------------------------...............----------------------------------------  18
J  97.3% (36/37)    IGHJ4*02     12   ----------------------------------------------------..............................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_53538

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_4955   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_4955   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_4955   181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_4955   271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_53532

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         392     2e-111
IGHD1-26*01                                                                                           12.2    35    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CACGACCAAGACGATGCAAC	AGTGGG	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACGACCAAGACGATGCAACAGTGGGTGACTAC	ARHDQDDATVGDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  R  I  S  C  Q  G  S  G  Y  S  F  A  M  H
                    Query_4956     1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAGAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTCAGGGTTCTGGATACAGCTTTGCCATGCA  90
V  93.4% (270/289)  IGHV5-10-1*01  6    .....................A.......A...............................A....................A...GCT.  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  R  D  S  Y  T  T  Y  S  P
                    Query_4956     91   CTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGCGGATTGATCCTCGTGACTCTTATACGACCTACAGCCC  180
V  93.4% (270/289)  IGHV5-10-1*01  96   ........G...........................................A...........A.............C.A.........  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  R  V  T  I  S  V  D  K  S  I  T  T  A  H  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4956     181  GTCCTTCCAAGGCCGCGTCACCATCTCAGTTGACAAGTCCATCACCACTGCCCATCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (270/289)  IGHV5-10-1*01  186  ..............A..............C..............G.......T.C...........C.......................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          I  Y  Y  C  A  R  H  D  Q  D  D  A  T  V  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4956     271  CATCTATTACTGTGCGAGACACGACCAAGACGATGCAACAGTGGGTGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  356
V  93.4% (270/289)  IGHV5-10-1*01  276  ...G...............-------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD1-26*01    6    ---------------------------------------......-----------------------------------------  11
J  97.6% (40/41)    IGHJ4*02       8    ---------------------------------------------..................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_53533

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     8e-121
IGHD2-15*01                                                                                           10.3    132   
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AT	TATTG	AGTGATCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAATTATTGAGTGATCGTGCTTTTGATATC	ARQLLSDRAFDI	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	281	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  D  S  G  Y  S  F  T  S  Y
                    Query_4957   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGATTCTGGATACAGCTTTACCAGCTA  90
V  96.6% (281/291)  IGHV5-51*01  6    ..............................A..............................A...G........................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  I  I  F  P  A  D  S  D  A  R  Y  S  P
                    Query_4957   91   CTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGTTGGGGATCATCTTTCCTGCTGACTCTGATGCCAGATACAGCCC  180
V  96.6% (281/291)  IGHV5-51*01  96   .........C....................................A............A.....G..........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4957   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.6% (281/291)  IGHV5-51*01  186  .............................C.............A..............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  Q  L  L  S  D  R  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4957   271  CATGTATTACTGTGCGAGACAATTATTGAGTGATCGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  353
V  96.6% (281/291)  IGHV5-51*01  276  .....................--------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (5/5)     IGHD2-15*01  5    -----------------------.....-------------------------------------------------------  9
J  100.0% (47/47)   IGHJ3*02     4    ------------------------------------...............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_53530

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           341     5e-96
IGHD2-2*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCTAAATGGATTCTCG	ATTGTGCTACTACCGGTTGCTAT	CTG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCTAAATGGATTCTCGATTGTGCTACTACCGGTTGCTATCTGGACTAC	ARDPKWILDCATTGCYLDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  V  S  G  F  P  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_4958   1    GGTCCCTGAGACTCTCCTGTTCAGTCTCTGGATTCCCCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-11*01  47   ....................G...C..........A......................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  K  I  T  P  S  G  S  A  I  D  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_4958   91   AGTGGGTTTCAAAGATCACTCCTAGTGGCAGTGCCATAGACTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  93.6% (234/250)  IGHV3-11*01  137  ...........T.C..T.G.AG......T...A.....T..................A................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  L  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  P  K  W  I  L  D  
                    Query_4958   181  AGAACTTACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATATTACTGTGCGAGAGACCCTAAATGGATTCTCGATT  270
V  93.6% (234/250)  IGHV3-11*01  227  ......C...........................................G.G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  78.3% (18/23)    IGHD2-2*01   6    ---------------------------------------------------------------------------------------...  8

                                      -IMGT----------------------->                                  
                                      C  A  T  T  G  C  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4958   271  GTGCTACTACCGGTTGCTATCTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  78.3% (18/23)    IGHD2-2*01   9    ..AG..G....A.C......-------------------------------------------  28
J  100.0% (40/40)   IGHJ4*02     9    -----------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_53536

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           333     1e-93
IGHD3-10*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTTGG	GGTTCGAGGAGTTAT	CAGGAAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGGGGTTCGAGGAGTTATCAGGAATCTACTACTACGGCATGGACGTC	ARLGFEELSGIYYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4959   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACTACCTATAGTATGAACTGGGTCCGGCAGGCTCCAGGTAAGGGCCTGG  90
V  93.1% (230/247)  IGHV3-21*01  47   ..........................................G..G......C..............C...........G.....G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  S  I  S  S  R  D  T  Y  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_4959   91   AGTGGCTCTCGTCCATTAGTAGTCGAGATACTTACATAAACTACGCAGACTCCGTAAAGGGCCGATTCACCATCTCCAGAGACAGCGCCA  180
V  93.1% (230/247)  IGHV3-21*01  137  .....G....A............A.TAG..G.......T.............A..G............................A.....  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  L  G  F  E  E  L  S  
                    Query_4959   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGTTGGGGTTCGAGGAGTTATCAG  270
V  93.1% (230/247)  IGHV3-21*01  227  ...................................................................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------------......G........---  25

                                      IMGT--------------------->                                 
                                      G  I  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4959   271  GAATCTACTACTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  98.2% (54/55)    IGHJ6*02     8    ----............T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_53537

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            291     5e-81
IGHD1-26*01                                                                                           10.3    117  
IGHJ6*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACTTTCGCTTCGC	ACTAC	CTACATT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACTTTCGCTTCGCACTACCTACATTTGGACGTC	ARTFASHYLHLDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	46	5	0	90.2
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	100	14	0	87.7
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	216	30	0	87.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T  T  N  Q  W  W  T  W  V  R  Q  P  P  G  G  G  V 
                    Query_4960   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCACTAATCAGTGGTGGACTTGGGTCCGCCAGCCCCCAGGGGGGGGGGTG  90
V  87.8% (216/246)  IGHV4-4*01   49   ........................................G..G..G.A.C.......G......................AA....C..  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  F  P  N  G  N  T  D  Y  S  P  S  L  K  S  R  L  T  I  S  M  A  K  S  K 
                    Query_4960   91   GAGTGGATTGGTGAAATTTTTCCTAATGGAAACACCGACTACAGCCCGTCCCTCAAGAGTCGACTCACCATTTCAATGGCTAAGTCCAAG  180
V  87.8% (216/246)  IGHV4-4*01   139  ...........G.....C.A..A..G...G.G....A......A...................G.......A...G.A.AC.........  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  V  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  T  F  A  S  H  Y  L  H 
                    Query_4960   181  AACCAGGTCTCCCTGAAACTTAACTCTGTGACGGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAACTTTCGCTTCGCACTACCTACAT  270
V  87.8% (216/246)  IGHV4-4*01   229  ......T..........G..G.G.........C......................G..........------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (5/5)     IGHD1-26*01  16   -------------------------------------------------------------------------------.....------  20

                                      -------->                              
                                       L  D  V  W  G  Q  G  A  T  V  S  V  S 
                    Query_4960   271  TTGGACGTCTGGGGCCAAGGGGCCACGGTCAGCGTCTCC  309
J  94.7% (36/38)    IGHJ6*02     22   -....................A.........C.......  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_53535

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           343     2e-96
IGHD6-6*01                                                                                            19.9    0.17 
IGHJ6*02                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACCCGA	AGTAAAGCAGGTCGTC	ACCAAAGCACGCCCTTTACACCGGGATATAGAAAAAT	ATTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACCCGAAGTAAAGCAGGTCGTCACCAAAGCACGCCCTTTACACCGGGATATAGAAAAATATTCCTACTTCTACTACGCTATGGACGTC	AREPEVKQVVTKARPLHRDIEKYSYFYYAMDV	238	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4961   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAAAAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (232/245)  IGHV4-59*01  49   ........................................GT.G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  S  S  G  S  T  K  Y  N  P  S  L  Q  S  R  V  T  V  S  V  D  T  S  T  N 
                    Query_4961   91   TGGATTGGGTATATCTCTTCCAGTGGGAGCACCAAGTACAACCCCTCCCTCCAGAGTCGAGTCACCGTATCAGTAGACACGTCCACGAAC  180
V  94.7% (232/245)  IGHV4-59*01  139  ................A..A...............C...............A..............A..................A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       R  F  S  L  M  L  Y  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  P  E  V  K  Q  V  V  T 
                    Query_4961   181  CGGTTCTCCCTGATGCTGTACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAACCCGAAGTAAAGCAGGTCGTCACC  270
V  94.7% (232/245)  IGHV4-59*01  229  .A...........A....AG.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (14/16)    IGHD6-6*01   2    -----------------------------------------------------------------------....T.....C.....---  17

                                      -----------CDR3-IMGT------------------------------------------>                           
                                       K  A  R  P  L  H  R  D  I  E  K  Y  S  Y  F  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_4961   271  AAAGCACGCCCTTTACACCGGGATATAGAAAAATATTCCTACTTCTACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  360
J  95.2% (59/62)    IGHJ6*02     1    ----------------------------------...A.....A........G.....................................  56

                                            
                                       S  S 
                    Query_4961   361  TCCTCA  366
J  95.2% (59/62)    IGHJ6*02     57   ......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_107432

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            405     3e-115
IGHD3-10*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGAC	TGGTTCGGGGA	CTT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTAC	ARVTGSGTYSFDY	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	74	1	0	98.7
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	102	12	0	89.5
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	277	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  G 
                    Query_4962   1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCGGC  90
V  93.9% (277/295)  IGHV1-8*02   1    .......................G...............................................................AC.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  D  Y 
                    Query_4962   91   AGCTATGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATGAATCCTAACAGTGGGAACACAGACTAT  180
V  93.9% (277/295)  IGHV1-8*02   91   ..............................A..................................C...........T.......G....  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  Y  M  E  L  S  S  L  G  S  A  D 
                    Query_4962   181  GCACAGAAGTTCCGGGGCAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCTACATGGAGCTGAGTAGTCTGGGATCTGCCGAC  270
V  93.9% (277/295)  IGHV1-8*02   181  .............A.......................A...C..C.T........................C..C...A......AG...  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  Y  C  A  R  V  T  G  S  G  T  Y  S  F  D  Y  W  G  Q  G  T  L  V  T  V  P  S 
                    Query_4962   271  ACGGCCGTCTATTACTGTGCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCA  360
V  93.9% (277/295)  IGHV1-8*02   271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (11/11)   IGHD3-10*01  10   -----------------------------...........--------------------------------------------------  20
J  93.8% (45/48)    IGHJ4*02     1    -------------------------------------------...A......C..............................T.....  47

                                       
                                       
                    Query_4962   361  G  361
J  93.8% (45/48)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_333138

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           369     2e-104
IGHD2-21*02                                                                                           18.0    0.65  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACTG	GGTGGGGACTTCTAT	GGTCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACGACTGGGTGGGGACTTCTATGGTCCATTTGAGTTC	VRRLGGDFYGPFEF	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	263	27	0	90.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  E  I  S  C  K  A  Y  G  Y  A  F  N  D  Y
                    Query_4963   1    GCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCCGGGGAGTCTCTGGAGATCTCCTGTAAGGCTTATGGATACGCCTTTAACGACTA  90
V  90.7% (263/290)  IGHV5-51*01  6    ........................G........................A...............G..C.......AG.....C.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  E  K  G  L  D  W  M  G  V  I  Y  P  D  D  L  D  T  T  Y  S  P
                    Query_4963   91   CTGGATCGGCTGGGTGCGCCAGAAGCCCGAGAAAGGCCTGGATTGGATGGGGGTCATCTATCCTGATGACCTTGATACGACATACAGTCC  180
V  90.7% (263/290)  IGHV5-51*01  96   .......................T.....G............G.........A............G....TC......C.G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  N  T  I  Y  L  R  W  S  S  L  K  A  S  D  T  A
                    Query_4963   181  GTCCTTCCAAGGCCAGGTCACAATCTCAGTCGACAAGTCCATCAACACCATCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  90.7% (263/290)  IGHV5-51*01  186  .....................C.......C..............G....GC........A..............................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  V  R  R  L  G  G  D  F  Y  G  P  F  E  F  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_4963   271  CATGTATTATTGTGTGAGACGACTGGGTGGGGACTTCTATGGTCCATTTGAGTTCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  359
V  90.7% (263/290)  IGHV5-51*01  276  .........C....C.....---------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                       
D  86.7% (13/15)    IGHD2-21*02  11   -------------------------.....T....G....-------------------------------------------------  25
J  93.0% (40/43)    IGHJ4*02     6    ----------------------------------------------.....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_302480

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4964   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  98.4% (239/243)  IGHV4-59*01  49   ......................................................................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_4964   91   TGGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  .........T................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_4964   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (18/20)    IGHD5-18*01  1    ----------------------------------------------------------------..........C.....T...------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4964   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_195098

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           374     7e-106
IGHD3-3*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	242	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4965   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (242/245)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_4965   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.8% (242/245)  IGHV4-34*01  139  .........................................................................T................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_4965   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  98.8% (242/245)  IGHV4-34*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4965   271  GCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_244164

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           355     3e-100
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCACTGGCGC	ATAGCAGCTCGTC	GGGAGGGGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCACTGGCGCATAGCAGCTCGTCGGGAGGGGGGCTTGACCAC	ASLAHSSSSGGGLDH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4966   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.3% (236/245)  IGHV3-30*03  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  V  K  W  Y  A  D  S  L  K  G  R  I  T  I  S  R  D  N  S  
                    Query_4966   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTGTTAAATGGTATGCAGACTCCCTGAAGGGCCGAATCACCATCTCCAGAGACAATTCCA  180
V  96.3% (236/245)  IGHV3-30*03  137  ................................AA.....AC............G...........T........................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  L  A  H  S  S  S  S  
                    Query_4966   181  AGAACACGCTGTATCTAGAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTCTATTACTGTGCGTCACTGGCGCATAGCAGCTCGTCGG  270
V  96.3% (236/245)  IGHV3-30*03  227  ................GC..................................G............-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (13/13)   IGHD6-6*01   5    ---------------------------------------------------------------------------.............--  17

                                      ---------------->                                  
                                      G  G  G  L  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4966   271  GAGGGGGGCTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.6% (41/42)    IGHJ4*02     7    ---------.....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_244165

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           327     8e-92
IGHD3-16*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	GTGGAGC	TTGGGGG	GCCTAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTGGAGCTTGGGGGGCCTACGACTAC	GGAWGAYDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  A  M  A  W  L  R  Q  A  P  G  K  G  L  
                    Query_4967   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCACCTATGCCATGGCCTGGCTCCGCCAGGCTCCAGGGAAGGGGCTAC  90
V  93.0% (226/243)  IGHV3-23*01  47   ..........................................G..G..........AG....G.........................GG  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  D  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_4967   91   AATGGGTCTCATCTATTAGTGATAGTGGAGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.0% (226/243)  IGHV3-23*01  137  .G.........G.........G......T.............................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      N  N  T  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  G  G  A  W  G  A  Y  D  Y  
                    Query_4967   181  ACAACACACTGTCTCTGCAAATGAATAGCCTGAGAGCCGAAGACACGGCCGTATATTATTGTGGTGGAGCTTGGGGGGCCTACGACTACT  270
V  93.0% (226/243)  IGHV3-23*01  227  .G.....G....A............C..............G.................C....---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (7/7)     IGHD3-16*01  16   ----------------------------------------------------------------------.......-------------  22
J  100.0% (38/38)   IGHJ4*02     9    -----------------------------------------------------------------------------------.......  15

                                                                     
                                      W  G  Q  G  T  L  V  T  V  S  S
                    Query_4967   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTC  301
J  100.0% (38/38)   IGHJ4*02     16   ...............................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_244162

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           19.9    0.16 
IGHJ1*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	TTCCTCGGCGA	GTATTGCACTGGCTGG	AACATTTGGGGT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTCCTCGGCGAGTATTGCACTGGCTGGAACATTTGGGGTC	ARGSSASIALAGTFGV	261	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	43	7	0	86
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	46	5	0	90.2
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	99	15	0	86.8
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	236	32	0	88.1


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  S  C  G  V  R  G  G  S  F  S  G  S  Y  W  A  W  I  R  
                    Query_4968   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCTCTTGCGGTGTCCGTGGTGGGTCCTTCAGTGGCTCTTACTGGGCCTGGATCCGCC  90
V  88.1% (236/268)  IGHV4-34*01  26   ........T.......T..................A.C....C....TA..................T.AC......AG...........  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  T  G  E  I  N  H  S  G  S  P  Q  Y  N  P  S  L  K  S  R  V  S  
                    Query_4968   91   AGCCCCCAGGCAAGGGGCTGGAGTGGACTGGCGAAATCAATCATAGTGGAAGTCCCCAATACAACCCGTCCCTCAAGAGTCGAGTCAGTA  180
V  88.1% (236/268)  IGHV4-34*01  116  ..........G................T...G....................CA..A.C............................CC.  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  A  V  D  T  S  N  N  H  L  S  L  R  M  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_4968   181  TCGCAGTGGACACGTCGAACAACCACCTCTCCCTGAGGATGACCTCTGTTACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGTT  270
V  88.1% (236/268)  IGHV4-34*01  206  .AT....A........C..G.....GT.........A.C...G......G......................................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  

                                      ----------CDR3-IMGT------------------>                                  
                                      S  S  A  S  I  A  L  A  G  T  F  G  V  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_4968   271  CCTCGGCGAGTATTGCACTGGCTGGAACATTTGGGGTCTGGGGCCAGGGCACCCTAGTCACCGTCTCCGCAG  342
D  87.5% (14/16)    IGHD6-19*01  3    ---------....A...G.......-----------------------------------------------  18
J  94.3% (33/35)    IGHJ1*01     18   -------------------------------------..................G............T...  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_302485

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           304     1e-84
IGHD3-16*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	221	27	0	89.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  F  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_4969   4    CCCTGAGACTCTCCTGCACTGTGTTTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  89.1% (221/248)  IGHV4-61*01  50   .....TCC...A..........C.C...............C....G.AG.T..........C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S  
                    Query_4969   94   TGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCCA  183
V  89.1% (221/248)  IGHV4-61*01  140  ...A.........GT............G......CAC..A.........................G.CA....A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y  
                    Query_4969   184  AAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTATC  273
V  89.1% (221/248)  IGHV4-61*01  230  .G................A.................................G...............----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-16*02  24   ------------------------------------------------------------------------------------......  29

                                      ---------------->                                  
                                      R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_4969   274  GTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  324
D  100.0% (7/7)     IGHD3-16*02  30   .--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    -.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_244160

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           266     2e-73
IGHD3-3*01                                                                                            19.9    0.16 
IGHJ2*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGCATCG	CGACTTTTGGCGTGGT	CAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGCATCGCGACTTTTGGCGTGGTCACCTACTGGTACTTCGATCTC	AREGIATFGVVTYWYFDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	93	21	0	81.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	210	40	0	84


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  Q  F  T  F  S  K  Y  R  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4970   1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTCAATTCACATTTAGTAAATATAGAATGAACTGGGTCCGCCAGGCTCCTGGGAAGGGGCTGG  90
V  84.0% (210/250)  IGHV3-21*01  47   .....................C..C....GG......C..C....GC.....C.......................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  L  S  S  S  G  A  H  I  F  Y  S  D  S  M  R  G  R  V  T  I  S  R  D  N  A  
                    Query_4970   91   AGTGGGTCTCCTCTCTTAGTAGTAGTGGAGCTCACATTTTCTACTCAGACTCAATGAGGGGCCGAGTCACAATCTCCAGAGACAACGCCA  180
V  84.0% (210/250)  IGHV3-21*01  137  ..........A..CA...........A.TAG.T....A.A....G........G...A.......T....C...................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  N  I  L  F  L  Q  M  D  N  L  R  V  E  D  T  A  I  Y  Y  C  A  R  E  G  I  A  T  F  G  
                    Query_4970   181  GGAATATTTTGTTTTTGCAAATGGACAACCTGAGAGTCGAAGACACGGCTATTTACTACTGTGCGAGAGAGGGCATCGCGACTTTTGGCG  270
V  84.0% (210/250)  IGHV3-21*01  227  A...CTCAC...A.C........A...G........C...G.........G.G..T..............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD3-3*01   7    ------------------------------------------------------------------------------...T......A.  18

                                      IMGT--------------------->                                  
                                      V  V  T  Y  W  Y  F  D  L  W  G  R  G  T  V  V  S  V  S  S  
                    Query_4970   271  TGGTCACCTACTGGTACTTCGATCTCTGGGGCCGTGGCACCGTGGTCAGTGTCTCCTCAG  330
D  87.5% (14/16)    IGHD3-3*01   19   ....--------------------------------------------------------  22
J  96.2% (51/53)    IGHJ2*01     1    -------..................................C......C...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_302487

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           263     2e-72
IGHD3-3*01                                                                                            19.9    0.16 
IGHJ2*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGCATCG	CGACTTTTGGCGTGGT	CAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGCATCGCGACTTTTGGCGTGGTCACCTACTGGTACTTCGATCTC	AREGIATFGVVTYWYFDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	93	21	0	81.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	209	41	0	83.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  Q  F  T  F  S  K  Y  R  M  N  W  A  R  Q  A  P  G  K  G  L  
                    Query_4971   1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTCAATTCACATTTAGTAAATATAGAATGAACTGGGCCCGCCAGGCTCCTGGGAAGGGGCTGG  90
V  83.6% (209/250)  IGHV3-21*01  47   .....................C..C....GG......C..C....GC.....C..........T............A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  L  S  S  S  G  A  H  I  F  Y  S  D  S  M  R  G  R  V  T  I  S  R  D  N  A  
                    Query_4971   91   AGTGGGTCTCCTCTCTTAGTAGTAGTGGAGCTCACATTTTCTACTCAGACTCAATGAGGGGCCGAGTCACAATCTCCAGAGACAACGCCA  180
V  83.6% (209/250)  IGHV3-21*01  137  ..........A..CA...........A.TAG.T....A.A....G........G...A.......T....C...................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  N  I  L  F  L  Q  M  D  N  L  R  V  E  D  T  A  I  Y  Y  C  A  R  E  G  I  A  T  F  G  
                    Query_4971   181  GGAATATTTTGTTTTTGCAAATGGACAACCTGAGAGTCGAAGACACGGCTATTTACTACTGTGCGAGAGAGGGCATCGCGACTTTTGGCG  270
V  83.6% (209/250)  IGHV3-21*01  227  A...CTCAC...A.C........A...G........C...G.........G.G..T..............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD3-3*01   7    ------------------------------------------------------------------------------...T......A.  18

                                      IMGT--------------------->                                  
                                      V  V  T  Y  W  Y  F  D  L  W  G  R  G  T  V  V  S  V  S  S  
                    Query_4971   271  TGGTCACCTACTGGTACTTCGATCTCTGGGGCCGTGGCACCGTGGTCAGTGTCTCCTCAG  330
D  87.5% (14/16)    IGHD3-3*01   19   ....--------------------------------------------------------  22
J  96.2% (51/53)    IGHJ2*01     1    -------..................................C......C...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_302488

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           360     1e-101
IGHD6-13*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTT	TATAACAGCAGTTGG	GTGCTCGA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTTATAACAGCAGTTGGGTGCTCGATGACTTC	ARDFYNSSWVLDDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  I  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_4972   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAATCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-21*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  T  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4972   91   AGTGGGTCTCATCCATTAGTAGTAGTACTAGTTACATATATTATGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-21*01  137  ...........................G............C..C..............................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  R  S  L  Y  L  H  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  Y  N  S  S  W  
                    Query_4972   181  AGAGATCACTGTATCTGCACATGAACAACCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGATTTTTATAACAGCAGTTGGG  270
V  96.0% (240/250)  IGHV3-21*01  227  ...AC..............A.......G........................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD6-13*01  4    --------------------------------------------------------------------------....G......C...-  18

                                      ------------->                                
                                      V  L  D  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4972   271  TGCTCGATGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  316
J  97.4% (38/39)    IGHJ4*02     8    -------.....A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_302489

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            23.8    0.011
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	ACTCTTCG	ATTACGATGTTTGGA	ACAGCCCTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTCTTCGATTACGATGTTTGGAACAGCCCTCGACTAC	ARDSSITMFGTALDY	261	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	44	6	0	88
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	45	6	0	88.2
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	103	11	0	90.4
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	239	28	0	89.5


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  S  V  S  G  E  P  F  T  G  Y  Y  W  A  W  I  R  
                    Query_4973   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACGTGCAGTGTCTCTGGTGAGCCCTTCACTGGTTACTACTGGGCCTGGATCCGCC  90
V  89.5% (239/267)  IGHV4-34*01  26   ........T.......T....................C...GC.....A.....G.T......G.............AG...........  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  A  P  G  K  G  L  E  W  I  G  D  I  N  H  R  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_4973   91   AGGCCCCCGGGAAGGGGCTGGAGTGGATTGGCGACATCAATCACCGTGGAAGCACCAACTACAATCCGTCCCTCAAGAGCCGGGTCACCA  180
V  89.5% (239/267)  IGHV4-34*01  116  ..C....A.......................G..A........TA...................C..............T..A.......  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  I  D  T  S  N  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  S  V  Y  Y  C  A  R  D  
                    Query_4973   181  TATCTATAGACACGTCCAACAACCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGTCTGTCTATTATTGTGCGAGAGACT  270
V  89.5% (239/267)  IGHV4-34*01  206  ....AG.............G.................G....G......................G....G.....C..........---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      --------CDR3-IMGT----------------->                                  
                                      S  S  I  T  M  F  G  T  A  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4973   271  CTTCGATTACGATGTTTGGAACAGCCCTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  93.3% (14/15)    IGHD3-3*01   3    -----........T......-------------------------------------------------  17
J  100.0% (40/40)   IGHJ4*02     9    -----------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_133291

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           330     1e-92
IGHD6-6*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	TC	ATAGCAGTTCGT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACTCATAGCAGTTCGTACTACTATGAGTAC	TTHSSSYYYEY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	232	21	0	91.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  T  W  L  S  W  V  R  Q  D  P  E  K  G  L  
                    Query_4974   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACACCTGGCTGAGCTGGGTCCGCCAGGATCCAGAGAAGGGTCTGG  90
V  91.7% (232/253)  IGHV3-15*01  47   .......T.......................................G.....A..................C.....G......G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      A  W  V  G  R  I  K  S  E  T  H  G  G  T  T  D  Y  P  A  P  V  K  G  R  F  T  V  S  R  D  
                    Query_4974   91   CGTGGGTTGGCCGTATTAAAAGCGAGACTCATGGTGGGACAACAGACTACCCTGCACCCGTGAAAGGCAGATTCACCGTCTCTAGAGATG  180
V  91.7% (232/253)  IGHV3-15*01  137  A......................A.A...G....................G..........................A....A.......  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  D  T  L  Y  L  H  M  N  D  L  K  S  E  D  T  A  V  Y  F  C  T  T  H  S  S  S  Y  
                    Query_4974   181  ATTCAAAAGACACACTGTATCTGCACATGAACGACCTGAAAAGCGAGGACACAGCCGTGTATTTCTGCACCACTCATAGCAGTTCGTACT  270
V  91.7% (232/253)  IGHV3-15*01  227  ........A....G...........A......AG........C....................A...T.....-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  91.7% (11/12)    IGHD6-6*01   5    ---------------------------------------------------------------------------.......C....---  16
J  91.7% (44/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  Y  E  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_4974   271  ACTATGAGTACTGGGGTCAGGGAACCCGGGTCACCGTCTCCTCAG  315
J  91.7% (44/48)    IGHJ4*02     4    ...T...C........C..........T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_133297

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         321     7e-90
IGHD3-10*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGGATCGGGGGCGGGCC	TATTATA	TA	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGATCGGGGGCGGGCCTATTATATATTGATTAT	ARGGSGAGLLYIDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  V  S  G  F  T  I  N  S  F  A  T  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4975     1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACTATCAATAGTTTTGCCACACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.2% (227/249)  IGHV3-30-3*01  47   ........................C............CT...G...C.A...T.TG..................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  D  G  S  N  E  F  Y  A  D  S  M  K  G  R  F  T  L  Y  R  D  N  S  
                    Query_4975     91   AGTGGGTGGCAGTAATTTCATATGATGGAAGCAATGAATTCTACGCAGACTCCATGAAGGGCCGATTCACCCTCTACAGAGACAATTCCC  180
V  91.2% (227/249)  IGHV3-30-3*01  137  .............T..A..................A...A.............G.................A...C.............A  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                        Q  N  T  L  D  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  G  S  G  A  G  L  
                    Query_4975     181  AGAACACTCTGGATCTACAAATGAACAGTCTGAGAGTTGAGGACACGGCTGTGTATTACTGTGCGAGAGGCGGATCGGGGGCGGGCCTAT  270
V  91.2% (227/249)  IGHV3-30-3*01  227  .......G...T....G...........C.......C................................---------------------  295
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-10*01    23   ---------------------------------------------------------------------------------------...  25

                                        ------------->                                  
                                        L  Y  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4975     271  TATATATTGATTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (7/7)     IGHD3-10*01    26   ....--------------------------------------------  29
J  95.2% (40/42)    IGHJ4*02       7    ------....C..C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_133296

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           427     9e-122
IGHD1-26*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	GGG	GGTCTAGTGGAAGGTACTAC	CTCCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTAC	ARGGLVEGTTSFFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_4976   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTAGTACCTA  90
V  97.2% (281/289)  IGHV5-51*03  6    ..............................A....................................................CC.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_4976   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  97.2% (281/289)  IGHV5-51*03  96   .................................................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  A  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_4976   181  GTCCTTCCAAGGCCAGGTCGCCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.2% (281/289)  IGHV5-51*03  186  ...................A......................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  A  R  G  G  L  V  E  G  T  T  S  F  F  D  Y  W  G  Q  G  T  L  A  T  V  S  S
                    Query_4976   271  CATTTATTACTGTGCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTACTGGGGCCAGGGAACCCTGGCCACCGTCTCGTC  360
V  97.2% (281/289)  IGHV5-51*03  276  ...G............A..-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  85.0% (17/20)    IGHD1-26*01  1    ----------------------...A......G..C......------------------------------------------------  20
J  95.5% (42/44)    IGHJ4*02     5    ------------------------------------------------.............................T.........C..  46

                                        
                                        
                    Query_4976   361  AG  362
J  95.5% (42/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_244168

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           347     7e-98
IGHD3-22*01                                                                                           21.8    0.041
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GTATTACTTTGAGAATAGTG	CCAGCACGTTCGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTATTACTTTGAGAATAGTGCCAGCACGTTCGGTGCTTTTGATATC	ARYYFENSASTFGAFDI	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	232	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4977   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (232/242)  IGHV4-59*08  49   ...................C....................G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  N  G  S  T  N  Y  N  P  S  L  K  S  R  L  I  I  S  V  D  T  S  K  N 
                    Query_4977   91   TGGATTGGCTATATCCATTACAATGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGACTCATCATATCAGTAGACACGTCCAAGAAC  180
V  95.9% (232/242)  IGHV4-59*08  139  ........G......T......G.....................................G...C.........................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  Y  Y  F  E  N  S  A  S  T 
                    Query_4977   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCCTATATTACTGTGCGAGGTATTACTTTGAGAATAGTGCCAGCACG  270
V  95.9% (232/242)  IGHV4-59*08  229  ...................G.........................G.G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  85.0% (17/20)    IGHD3-22*01  1    --------------------------------------------------------------........A...T.G.....--------  20

                                      ----------------->                                  
                                       F  G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_4977   271  TTCGGTGCTTTTGATATCTGGGGCCAAGGCACAATGGTCACCGTCTCTTCAG  322
J  97.9% (46/47)    IGHJ3*02     4    -----........................G......................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_244169

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           422     2e-120
IGHD5-12*01                                                                                           16.1    2.5   
IGHJ2*01                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAC	GGATGAGAGA	TGGCTACAATT	TTGTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACGGATGAGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTC	ATRMRDGYNFVDWYFDL	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  N  F  A  N  Y
                    Query_4978   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAACTTTGCCAACTA  90
V  96.6% (280/290)  IGHV5-51*01  6    .................................................................G...........G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_4978   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  96.6% (280/290)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  H  W  S  S  L  Q  A  S  D  T  A
                    Query_4978   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCACTGGAGTAGCCTCCAGGCCTCGGACACCGC  270
V  96.6% (280/290)  IGHV5-51*01  186  ............................................................G.....C.....GA................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  T  R  M  R  D  G  Y  N  F  V  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V
                    Query_4978   271  CATGTATTACTGTGCGACACGGATGAGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGT  360
V  96.6% (280/290)  IGHV5-51*01  276  .................G..----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  90.9% (10/11)    IGHD5-12*01  11   ------------------------------.......G...-------------------------------------------------  21
J  100.0% (51/51)   IGHJ2*01     3    -----------------------------------------------...........................................  45

                                              
                                        S  S  
                    Query_4978   361  CTCCTCAG  368
J  100.0% (51/51)   IGHJ2*01     46   ........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_319167

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_4979   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_4979   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_4979   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4979   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_319166

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	72	2	0	97.3
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	279	14	0	95.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  
                    Query_4980   4    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCA  93
V  95.2% (279/293)  IGHV5-51*03  2    ....G.....G......................................................................G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  
                    Query_4980   94   GCTACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACA  183
V  95.2% (279/293)  IGHV5-51*03  92   ............G.......................A...................................A....G.....A......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  
                    Query_4980   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACA  273
V  95.2% (279/293)  IGHV5-51*03  182  .................................................C...........G...............A.....T......  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_4980   274  CCGCCGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  363
V  95.2% (279/293)  IGHV5-51*03  272  .....A.G...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD6-19*01  5    --------------------------............----------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_4980   364  CCTCAG  369
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_319165

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           391     6e-111
IGHD4-17*01                                                                                           18.0    0.67  
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGG	CTACGGTGA	GTCCGAGTAGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTCTGGACGTC	ARDLATVSPSSFYYGLDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_4981   2    CAGCTGGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAT  91
V  93.1% (270/290)  IGHV1-18*01  7    .......................G.............................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  K  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_4981   92   GGTATTACCTGGGTGCGGCAGGCCCCTGGACAGGGACTTAAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  181
V  93.1% (270/290)  IGHV1-18*01  97   .....C.G.........A..............A..G...G.........................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  L  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  V  D  D  T  A 
                    Query_4981   182  ATGGTCCGGGACAGAGTCACCTTGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGAGTTGACGACACGGCC  271
V  93.1% (270/290)  IGHV1-18*01  187  .A.C...A..G..........A......C....................C..........C..............TC.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  S  F  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T 
                    Query_4981   272  GTGTATTACTGTGCGAGAGATCTGGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACC  361
V  93.1% (270/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------.........--------------------------------------------------------  12
J  98.1% (51/52)    IGHJ6*02     11   -----------------------------------------------..........A................................  53

                                               
                                       V  S  S 
                    Query_4981   362  GTCTCCTCA  370
J  98.1% (51/52)    IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_187363

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4982   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_4982   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_4982   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_4982   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_268702

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           288     4e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACTTTGACTTC	ARVSTSAYYFDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	214	30	0	87.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_4983   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGACAACCCCCAGGAAAGGGACTGGAG  90
V  87.7% (214/244)  IGHV4-59*01  49   .................................T........A.....T.C.........A....G..G........G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  S  F  D  T  S  K  R 
                    Query_4983   91   TGGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGTCCTTTGACACGTCCAAGAGG  180
V  87.7% (214/244)  IGHV4-59*01  139  .......GGT....C...........G.G..C...C................A..G............A..AG.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  Y  Y  F  D 
                    Query_4983   181  CAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATACTACTTTGAC  270
V  87.7% (214/244)  IGHV4-59*01  229  .............A....AGC..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-2*01   17   ---------------------------------------------------------------------......---------------  22
J  91.3% (42/46)    IGHJ4*02     1    -------------------------------------------------------------------------------...........  11

                                      -->                                
                                       F  W  G  R  G  T  L  V  V  V  S  S
                    Query_4983   271  TTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  305
J  91.3% (42/46)    IGHJ4*02     12   .A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_319161

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           288     5e-80
IGHD3-9*01                                                                                            27.6    8e-04
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGAACGGTCGCGATACA	ACGATATTTTGACT	AATTACAGAGACTCATATCCCC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGAACGGTCGCGATACAACGATATTTTGACTAATTACAGAGACTCATATCCCCTTGAGTTC	ARVERSRYNDILTNYRDSYPLEF	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	20	4	0	83.3
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	18	6	0	75
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	232	208	24	0	89.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  D  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  L  A  D  I 
                    Query_4984   13   TGTGCAGCGTCTGGATTCACCTTCAGTGATTTTGGCATGCATTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGCTGGCAGATATC  102
V  89.7% (208/232)  IGHV3-33*01  64   ...........................AGC.A.........C....................................G......T...A  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       W  S  D  G  S  K  E  N  Y  A  N  F  V  K  G  R  F  T  I  S  R  D  N  S  R  N  R  L  Y  L 
                    Query_4984   103  TGGTCCGATGGAAGCAAAGAAAACTATGCAAATTTCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCTAGGAACAGACTATATCTA  192
V  89.7% (208/232)  IGHV3-33*01  154  ....AT........T..TA..T........G.C.C....................................C.A.....CG..G.....G  243
                                       W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------------------CDR3-IMGT------
                                       Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  E  R  S  R  Y  N  D  I  L  T  N  Y 
                    Query_4984   193  CAAATTAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGTCGAACGGTCGCGATACAACGATATTTTGACTAATTAC  282
V  89.7% (208/232)  IGHV3-33*01  244  .....G..............................................--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (14/14)   IGHD3-9*01   6    ----------------------------------------------------------------------..............------  19

                                      ----------------------->                                  
                                       R  D  S  Y  P  L  E  F  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_4984   283  AGAGACTCATATCCCCTTGAGTTCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  340
J  92.9% (39/42)    IGHJ4*02     7    ----------------....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_319160

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-72*01                                                                                           366     2e-103
IGHD2-2*02                                                                                            19.9    0.16  
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-72*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTAGA	CAGTCGG	AGTACCAGGTGATATA	TTCCCT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGACAGTCGGAGTACCAGGTGATATATTCCCTCTACGGAATGGACGTC	ARQSEYQVIYSLYGMDV	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	254	6	6	0	0	100
Total	N/A	N/A	254	244	10	0	96.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_4985   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTGACCACTACATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.1% (244/254)  IGHV3-72*01  47   ....................................C.....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  S  R  N  K  V  N  R  Y  T  T  E  F  A  A  S  V  K  G  R  F  S  I  S  R  D  
                    Query_4985   91   AGTGGGTTGGCCGTAGTAGAAATAAAGTTAACAGGTACACCACAGAATTCGCCGCGTCTGTGAAAGGCAGATTCAGCATCTCAAGAGATC  180
V  96.1% (244/254)  IGHV3-72*01  137  ...............C......C....C......T.............A..........................C.............G  226
                                      E  W  V  G  R  T  R  N  K  A  N  S  Y  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      H  S  K  N  S  L  V  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  Q  S  E  Y  Q  
                    Query_4985   181  ATTCAAAGAACTCACTGGTTCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTGCTAGACAGTCGGAGTACCAGG  270
V  96.1% (244/254)  IGHV3-72*01  227  .................TA.......................................................----------------  300
                                      D  S  K  N  S  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R                 
D  87.5% (14/16)    IGHD2-2*02   14   ---------------------------------------------------------------------------------........C  22

                                      DR3-IMGT-------------------->                                 
                                      V  I  Y  S  L  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_4985   271  TGATATATTCCCTCTACGGAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTGTCCTCA  332
D  87.5% (14/16)    IGHD2-2*02   23   ..C....-------------------------------------------------------  29
J  95.9% (47/49)    IGHJ6*02     14   -------------......T...................................C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_187364

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD1-26*01                                                                                           12.2    31   
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARAKGIAVIVDAFDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_4986   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ..................A.....................G............................C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  V  S  V  D  M  S  N  N 
                    Query_4986   91   TGGATTGGATATATCTATTACAGAGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAGACATGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G..............T....G.....A......C.....CC................CA.A..........C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  K  G  I  A  V  I  V  D 
                    Query_4986   181  CGGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGTGCGAGAGCTAAGGGTATCGCTGTTATAGTAGAT  270
V  90.6% (221/244)  IGHV4-59*01  229  .A...........AG.................T.......CG.....G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------------......----  8
J  91.8% (45/49)    IGHJ3*01     2    ---------------------------------------------------------------------------------------...  4

                                      ----------->                                  
                                       A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_4986   271  GCTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  316
J  91.8% (45/49)    IGHJ3*01     5    .........G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_18488

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           333     1e-93
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAGTACCAA	ATAGCAGT	CCAATACCCCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCCAGTACCAAATAGCAGTCCAATACCCCCCCTTTGACTTC	VRGQYQIAVQYPPFDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  L  T  D  Y  A  M  Y  W  V  R  Q  A  P  G  K  G  P  
                    Query_4987   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTGACTGACTATGCAATGTACTGGGTCCGCCAGGCTCCAGGCAAGGGGCCGG  90
V  92.8% (231/249)  IGHV3-30*03  47   ....................................C...C.G.AG.....GC...C..............................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  H  G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  
                    Query_4987   91   AGTGGGTGGCCCTTATATCATATCATGGAAGTAATAAATTCTATGCAGACTCCGTGAAGGGCCGATTTACCATCTCCAGAGACATTTCCA  180
V  92.8% (231/249)  IGHV3-30*03  137  ..........AG...........G...............A...........................C................A.....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  G  Q  Y  Q  I  A  V  
                    Query_4987   181  AGAGCACGCTATATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGTGAGAGGCCAGTACCAAATAGCAGTCC  270
V  92.8% (231/249)  IGHV3-30*03  227  ...A......G....................................................C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  5    --------------------------------------------------------------------------------........--  12

                                      T------------------>                                  
                                      Q  Y  P  P  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4987   271  AATACCCCCCCTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.7% (43/44)    IGHJ4*02     5    ----------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_334047

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           308     4e-86
IGHD5-12*01                                                                                           16.1    2.3  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTGGTCCCGAAAA	ATATAGTG	AATATC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTGGTCCCGAAAAATATAGTGAATATCCTTTTGACATT	ARFGPEKYSEYPFDI	250	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	135	33	20	1	12	60.6
FR3-IMGT	136	249	114	106	8	0	93
CDR3-IMGT (germline)	250	255	6	6	0	0	100
Total	N/A	N/A	255	228	15	12	89.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  F  W  S  W  F  R  L  P  P  G  E  G  L  E 
                    Query_4988   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCAATCAGTGGTTACTTCTGGAGCTGGTTCCGGCTGCCCCCAGGGGAGGGACTGGAG  90
V  89.4% (228/255)  IGHV4-59*01  49   ...................................C......A......A..........A......A..........A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----------CDR2-IMGT-----------><--------------------------------------------
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  F  N  T  N  Y  N  P  S  L  K  S  R  V  A  I  S  L  D 
                    Query_4988   91   TGGATTGGGTATATTTATTACAGTGGGAGCACCAACTTCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCGCCATTTCACTAGAC  180
V  89.4% (228/255)  IGHV4-59*01  139  ..............C..............------------..................................A....A...G.....  216
                                       W  I  G  Y  I  Y  Y  S  G  S              T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-----------------CDR
                                       T  S  K  S  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  G  P  E  K 
                    Query_4988   181  ACGTCCAAGAGCCAGTTCTCCCTGAGACTGAGTTCGGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATTTGGTCCCGAAAAA  270
V  89.4% (228/255)  IGHV4-59*01  217  ..........A..............AG.....C..T.......................................---------------  291
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  100.0% (8/8)     IGHD5-12*01  5    -----------------------------------------------------------------------------------------.  5

                                      3-IMGT----------------->                                  
                                       Y  S  E  Y  P  F  D  I  W  G  Q  G  T  M  V  T  V  S  A  
                    Query_4988   271  TATAGTGAATATCCTTTTGACATTTGGGGCCAAGGGACAATGGTCACCGTCTCTGCAG  328
D  100.0% (8/8)     IGHD5-12*01  6    .......---------------------------------------------------  12
J  93.3% (42/45)    IGHJ3*02     6    -------------.......T..C..............................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_319169

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         291     6e-81
IGHD2-21*02                                                                                           37.2    1e-06
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD2-21*02	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGTTCCACATA	ATTGTGCTGGTGACTGCTATTC	AG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTTCCACATAATTGTGCTGGTGACTGCTATTCAGACTACTTTGACTCC	ERGST*LCW*LLFRLL*L	239	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	238	114	99	13	2	86.8
CDR3-IMGT (germline)	239	244	6	6	0	0	100
Total	N/A	N/A	246	218	26	2	88.6


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  S  S  I  T  S  S  Y  Y  W  G  W  I  R  Q  S  P  G  K  G  L 
                    Query_4989     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTCTTCCATCACCAGTTCTTACTACTGGGGCTGGATCCGGCAGTCCCCAGGGAAGGGGCTG  90
V  88.6% (218/246)  IGHV4-38-2*01  49   ...............................AC.......G....GG.........................C.................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  D  A  S  H  G  G  S  T  H  F  N  P  S  L  R  G  R  V  T    I  T  A  H  V  Q  
                    Query_4989     91   GAGTGGATTGGCGATGCCTCTCATGGTGGGAGCACCCACTTCAACCCGTCCCTAAGGGGTCGAGTCACC--ATCACTGCACACGTCCAGG  178
V  88.6% (218/246)  IGHV4-38-2*01  139  ...........GAG.AT..A....A...........T...A............C.A.A...........AT....G.AG.........A.  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                        E  P  V  L  P  E  R  D  L  C  D  R  R  R  H  G  R  V  F  L  C  E  R  G  S  T  *  L  C  W  
                    Query_4989     179  AACCAGTTCTCCCTGAACGTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAGAGGGGTTCCACATAATTGTGCTGGT  268
V  88.6% (218/246)  IGHV4-38-2*01  229  .................GC...G................................A..........------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  95.5% (21/22)    IGHD2-21*02    6    -------------------------------------------------------------------------------......G....  16

                                        MGT----------------------->                                  
                                        *  L  L  F  R  L  L  *  L  L  G  P  G  N  P  G  L  R  L  L   
                    Query_4989     269  GACTGCTATTCAGACTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  329
D  95.5% (21/22)    IGHD2-21*02    17   ...........--------------------------------------------------  27
J  95.8% (46/48)    IGHJ4*02       1    -------------............A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_319168

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD6-13*01                                                                                           18.0    0.55  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CACG	AGCAGCTGG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACACGAGCAGCTGGATTGACTAC	ARDTSSWIDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_4990   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ...............................G...........G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  T  G  S  T  N  Y  N  P  S  L  K  S  Q  F  T  I  S  V  D  T  S  K  N 
                    Query_4990   91   TGGATTGGGTATATCTTTTACACTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCAATTCACCATATCAGTAGACACGTCGAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  ................A.....G...................................G.G......................C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  S  S  W  I  D  Y  W 
                    Query_4990   181  CAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACACGAGCAGCTGGATTGACTACTGG  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-13*01  10   ---------------------------------------------------------------------.........------------  18
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------...........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_4990   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (42/42)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_18486

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD7-27*01                                                                                           14.1    9.9   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD7-27*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATGAT	ACTGGGG	GCTCCCTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTCCCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGSLYYLYGMDV	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	110	4	0	96.5
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	282	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  
                    Query_4991   3    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCCA  92
V  95.6% (282/295)  IGHV5-51*01  2    ....G.....G...........................................................................A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  
                    Query_4991   93   CTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACA  182
V  95.6% (282/295)  IGHV5-51*01  92   GC..C.......G.................................................T.................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  
                    Query_4991   183  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACA  272
V  95.6% (282/295)  IGHV5-51*01  182  ...........C.....................C...........................................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  T  G  G  S  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  
                    Query_4991   273  CCGCCATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTCCCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  362
V  95.6% (282/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD7-27*01  4    -----------------------------------.......------------------------------------------------  10
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------------......TA................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_4991   363  CGGTCACCGTCTCGTCA  379
J  94.7% (54/57)    IGHJ6*02     46   .............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_187367

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_4992   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGCGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_4992   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_4992   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_4992   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_250299

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            329     3e-92
IGHD1-26*01                                                                                           14.1    8.5  
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGATA	TTA	GGGAGCT	TG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGGATATTAGGGAGCTTGACTTCTTCTACTACGGTATGGACGTC	AKDIRELDFFYYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	252	10	9	1	0	90
Total	N/A	N/A	252	231	21	0	91.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  T  G  F  N  F  E  D  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_4993   1    GGTCCCTGAGACTCTCCTGTGCAGGCACTGGATTCAACTTTGAAGATTATGCCATACACTGGGTCCGGCAAGCTCCCGGGAAGGGCCTGG  90
V  91.7% (231/252)  IGHV3-9*01   47   ........................C.T.........C......T...........G....................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  T  W  N  S  D  N  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_4993   91   AGTGGGTCGCAGGTATTACTTGGAACAGTGATAACATCGGTTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  91.7% (231/252)  IGHV3-9*01   137  ........T.........G......T....G..G...A..C................................................A  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      E  N  S  V  Y  L  Q  M  D  S  L  R  P  E  D  T  A  L  Y  F  C  A  K  D  I  R  E  L  D  F  
                    Query_4993   181  AGAACTCCGTCTATCTGCAGATGGACAGTCTGAGACCTGAGGACACGGCCTTGTATTTCTGTGCAAAGGATATTAGGGAGCTTGACTTCT  270
V  91.7% (231/252)  IGHV3-9*01   227  ........C.G........A...A...........G.....................A.........A....------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (7/7)     IGHD1-26*01  9    ---------------------------------------------------------------------------.......--------  15
J  96.4% (54/56)    IGHJ6*02     4    ------------------------------------------------------------------------------------...A..  9

                                      T------------------>                              
                                      F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_4993   271  TCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  320
J  96.4% (54/56)    IGHJ6*02     10   A.................................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_26691

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           394     7e-112
IGHD4-4*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	CTACAGTAACTAC	GGGCGGTCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACAGTAACTACGGGCGGTCATACTACTATGAATAT	ARDYSNYGRSYYYEY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  E  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  R  F  T  K  Y 
                    Query_4994   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGGAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAGGTTTACCAAATAT  91
V  93.4% (271/290)  IGHV1-18*01  7    ..............................A.............................................CC.......GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  T  Y  N  G  Y  T  N  Y  S  Q 
                    Query_4994   92   GGAATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCACTTACAATGGTTACACAAACTATAGTCAG  181
V  93.4% (271/290)  IGHV1-18*01  97   ..T...............................................A.........G...........A...........GCA...  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  I  S  D  D  T  A 
                    Query_4994   182  AGTCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTATATGGAGCTGAGGAGCCTGATATCTGACGACACGGCC  271
V  93.4% (271/290)  IGHV1-18*01  187  .AG..................................................C...................G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       F  Y  F  C  A  R  D  Y  S  N  Y  G  R  S  Y  Y  Y  E  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_4994   272  TTTTATTTCTGTGCGAGAGACTACAGTAACTACGGGCGGTCATACTACTATGAATATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  361
V  93.4% (271/290)  IGHV1-18*01  277  G.G....A............----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (13/13)   IGHD4-4*01   4    --------------------.............---------------------------------------------------------  16
J  93.8% (45/48)    IGHJ4*02     1    -------------------------------------------......T...C..C.................................  47

                                       
                                       
                    Query_4994   362  G  362
J  93.8% (45/48)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_195115

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           322     2e-90
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_4995   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_4995   91   CTAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-61*08  139  ..G..................T..T................C.................G.......TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N 
                    Query_4995   181  AGGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAAC  270
V  91.2% (228/250)  IGHV4-61*08  229  .A.................A.....GC..........................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G..G.....G.  22

                                      3-IMGT----------------------->                                
                                       C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S
                    Query_4995   271  TGCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  332
D  86.4% (19/22)    IGHD2-15*01  23   ......--------------------------------------------------------  28
J  95.1% (39/41)    IGHJ4*02     6    ---------------------......T.C................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_80502

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_4996   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_4996   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_4996   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_4996   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_136676

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           361     4e-102
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	112	2	0	98.2
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_4997   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  96.4% (240/249)  IGHV4-31*02  50   .....TCC...A....................................G.........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  
                    Query_4997   94   TGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAAAGTCGACTTACCATATCAGTAGACACGTCTA  183
V  96.4% (240/249)  IGHV4-31*02  140  ..............T......A....................................G......G........................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A  
                    Query_4997   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCAA  273
V  96.4% (240/249)  IGHV4-31*02  230  .....................................................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD2-21*02  5    ----------------------------------------------------------------------..........G.......--  22

                                      ------------->                                  
                                      N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_4997   274  ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (48/48)   IGHJ4*02     1    ................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_272116

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD1-26*01                                                                                           12.2    31   
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARAKGIAVIVDAFDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_4998   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ..................A.....................G............................C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  V  S  V  D  M  S  N  N 
                    Query_4998   91   TGGATTGGATATATCTATTACAGAGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAGACATGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G..............T....G.....A......C.....CC................CA.A..........C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  K  G  I  A  V  I  V  D 
                    Query_4998   181  CGGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGTGCGAGAGCTAAGGGTATCGCTGTTATAGTAGAT  270
V  90.6% (221/244)  IGHV4-59*01  229  .A...........AG.................T.......CG.....G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------------......----  8
J  91.8% (45/49)    IGHJ3*01     2    ---------------------------------------------------------------------------------------...  4

                                      ----------->                                  
                                       A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_4998   271  GCTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  316
J  91.8% (45/49)    IGHJ3*01     5    .........G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_272114

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         358     4e-101
IGHD3-10*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CATGGA	GGTCCGGGGAATTA	CCAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACATGGAGGTCCGGGGAATTACCAGTTTGACTAC	ARHGGPGNYQFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	259	30	0	89.6


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  D  T  K
                    Query_4999     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAGGATCTCCTGTAAGGCTTCTGGATACAGTTTTGACACCAA  90
V  89.6% (259/289)  IGHV5-10-1*01  6    ..............................A........G.........................G............C...AC..G.T.  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  H  Y  N  S
                    Query_4999     91   GTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATAGATCCCAGTGACTCTTATACCCATTACAACTC  180
V  89.6% (259/289)  IGHV5-10-1*01  96   C.......G................................................T.....T...............A.C....G.C.  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  V  D  R  S  T  T  T  A  Y  M  Q  W  T  S  L  E  A  S  D  S  G
                    Query_4999     181  GTCCTTCCAAGGACACGTCACCATCTCGGTTGACAGGTCCACCACCACTGCCTACATGCAGTGGACCAGCCTGGAGGCCTCGGACAGCGG  270
V  89.6% (259/289)  IGHV5-10-1*01  186  ............C..............A.C.....A.....T..G..........C.........G.......A............C..C  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          I  Y  F  C  A  R  H  G  G  P  G  N  Y  Q  F  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_4999     271  CATTTATTTCTGTGCGCGACATGGAGGTCCGGGGAATTACCAGTTTGACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  356
V  89.6% (259/289)  IGHV5-10-1*01  276  ...G....A.......A..-------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                    
D  85.7% (12/14)    IGHD3-10*01    11   -------------------------...T......G...-----------------------------------------------  24
J  97.7% (42/43)    IGHJ4*02       6    -------------------------------------------.........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_272115

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           304     1e-84
IGHD6-13*01                                                                                           19.9    0.16 
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AG	AGCGGCAGCTGGT	GTCGCGTTTTTCG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGAGCGGCAGCTGGTGTCGCGTTTTTCGACAACTGGTTCGGCCCC	ARRAAAGVAFFDNWFGP	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	218	24	0	90.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  T  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_5000   4    CCCTGAGACTCTCCTGTACCGTCTCTGGTGGCTCCATCACTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAAT  93
V  90.1% (218/242)  IGHV4-59*01  50   .....TCC...A....C..T...................G.AG..........................................G..G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  N  
                    Query_5000   94   GGATTGGATATATCTATTACAGTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGCCACCATTTCAGTTGACACGTCCAAGAACC  183
V  90.1% (218/242)  IGHV4-59*01  140  .......G....................C...............................T......A.....A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  L  Y  F  C  A  R  R  A  A  A  G  V  A  F  F  
                    Query_5000   184  AGTTCTCCCTGAGGCTGAAGTCTGTGACCGCAGCGGATACGGCCTTATATTTCTGTGCGAGAAGAGCGGCAGCTGGTGTCGCGTTTTTCG  273
V  90.1% (218/242)  IGHV4-59*01  230  ............A.....GC...........T.....C......G.G....A..........----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  92.3% (12/13)    IGHD6-13*01  7    ----------------------------------------------------------------...A.........-------------  19

                                      ---------------->                                  
                                      D  N  W  F  G  P  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_5000   274  ACAACTGGTTCGGCCCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  324
J  96.1% (49/51)    IGHJ5*02     1    ............A.................C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_272119

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           265     5e-73
IGHD2-2*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GACGA	ATACTGTACTACTCCCGGCTGCT	TTAAGTACCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGACGAATACTGTACTACTCCCGGCTGCTTTAAGTACCCTTGACTCC	VKTNTVLLPAALSTLDS	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	125	24	13	8	3	54.2
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	244	5	4	1	0	80
Total	N/A	N/A	247	210	34	3	85


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  V  Y  V  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_5001   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCGTCTATGTCATGGCGTGGGTCCGCCAGGCTCCAGGGAGGGGCCTGG  90
V  85.0% (210/247)  IGHV3-23*01  47   ..........................................G.AG.....C....AGC......................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  T     G  N  G  A  A  A  Y  Y  A  D  S  V  K  G  R  F  N  I  S  R  D  N  S  
                    Query_5001   91   AGTGGGTCGCAGCGACT---GGAAATGGTGCAGCCGCATACTATGCCGACTCCGTGAAGGGCCGGTTCAACATCTCCAGGGACAATTCCG  177
V  85.0% (210/247)  IGHV3-23*01  137  ........T....T.T.AGT..T.G.....GTAG.A.......C..A......................C.........A.........A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      E  N  T  L  F  L  D  M  S  G  L  R  A  D  D  T  A  V  Y  Y  C  V  K  T  N  T  V  L  L  P  
                    Query_5001   178  AGAATACCCTTTTTCTGGATATGAGCGGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGTGAAGACGAATACTGTACTACTCCCGG  267
V  85.0% (210/247)  IGHV3-23*01  227  ....C..G..G.A....C.A....A.A.............G......................C...-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  78.3% (18/23)    IGHD2-2*01   4    ------------------------------------------------------------------------...T....G..G.A..A.  21

                                      GT-------------------->                                  
                                      A  A  L  S  T  L  D  S  W  G  Q  G  A  L  V  T  V  A  S  
                    Query_5001   268  CTGCTTTAAGTACCCTTGACTCCTGGGGCCAGGGAGCCCTGGTCACCGTCGCCTCAG  324
D  78.3% (18/23)    IGHD2-2*01   22   .....----------------------------------------------------  26
J  92.9% (39/42)    IGHJ4*02     7    ---------------......A.............A..............T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_136674

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           25.7    0.003
IGHJ1*01                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ1*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTTGTC	CAGTGGCTGGTAC	ACT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTTGTCCAGTGGCTGGTACACTTACTTCCAGGAT	ARGLSSGWYTYFQD	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  S  R  L  R  Q  P  P  G  Q  A 
                    Query_5002   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGGAGTTACTACTGGAGCCGGCTCCGGCAGCCCCCAGGGCAGGCA  90
V  92.0% (230/250)  IGHV4-61*01  49   ....................................G..........T...............T..A.................A...G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  S  G  T  A  F  Y  N  P  S  L  R  S  R  V  T  I  *  V  D  T  S 
                    Query_5002   91   CTGGAGTGGATTGGGTATATCTATAACAGCGGGACCGCCTTCTATAACCCCTCCCTCAGGAGCCGAGTCACCATATAAGTAGACACGTCC  180
V  92.0% (230/250)  IGHV4-61*01  139  ........................T....T....G.A..AA...C.............A...T.............C.............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  L  S  L  N  L  S  S  V  T  A  T  D  T  A  V  Y  Y  C  A  R  G  L  S  S  G  W  Y 
                    Query_5002   181  AAGAACCAGCTCTCCCTGAACCTGAGCTCTGTGACAGCTACGGACACGGCCGTGTATTACTGTGCGAGAGGGTTGTCCAGTGGCTGGTAC  270
V  92.0% (230/250)  IGHV4-61*01  229  .........T..........G..............C...G..............................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD6-19*01  9    -----------------------------------------------------------------------------.............  21

                                      -------------->                                 
                                       T  Y  F  Q  D  W  G  Q  V  T  L  V  S  V  A  S 
                    Query_5002   271  ACTTACTTCCAGGATTGGGGCCAGGTCACCCTGGTCTCCGTCGCCTCA  318
J  88.9% (40/45)    IGHJ1*01     7    ---.........C.C..........G..........A.....T.....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_306076

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*02                                                                                            366     2e-103
IGHD5-18*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*02	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAC	CGCAAACCCTATGCTGACGATGCGGTGACA	ATGGTTAC	ATCGTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACCGCAAACCCTATGCTGACGATGCGGTGACAATGGTTACATCGTTCTTTGACCAC	AHRKPYADDAVTMVTSFFDH	263	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	25	5	0	83.3
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	107	7	0	93.9
CDR3-IMGT (germline)	263	268	6	6	0	0	100
Total	N/A	N/A	268	251	17	0	93.7


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  N  T  D  G  V  S  V  A  W  I  R
                    Query_5003   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAATACTGATGGAGTGAGTGTGGCCTGGATCCG  90
V  93.7% (251/268)  IGHV2-5*02   30   ...........................................................GC...AG.......G......G.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  T  P  G  K  A  L  E  W  L  G  L  V  F  W  D  D  D  K  R  Y  R  P  S  L  K  N  R  L  T
                    Query_5003   91   TCAGACCCCAGGAAAGGCCCTGGAGTGGCTTGGACTCGTTTTTTGGGATGATGATAAGCGCTACAGGCCATCTCTGAAGAACAGACTCAC  180
V  93.7% (251/268)  IGHV2-5*02   120  ....C...........................C....A...A........................C.............G...G.....  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  T  K  D  T  S  R  N  Q  V  V  L  T  L  T  N  V  D  P  V  D  T  A  T  Y  Y  C  A  H  R
                    Query_5003   181  CATCACCAAGGACACCTCCAGAAACCAGGTGGTCCTTACATTGACCAACGTGGACCCTGTCGACACAGCCACATATTACTGTGCACACCG  270
V  93.7% (251/268)  IGHV2-5*02   210  ....................A...................A........A..........G...........................--  297
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                      ------------------CDR3-IMGT------------------------>                                  
                                        K  P  Y  A  D  D  A  V  T  M  V  T  S  F  F  D  H  W  G  Q  G  A  L  V  T  V  S  A  
                    Query_5003   271  CAAACCCTATGCTGACGATGCGGTGACAATGGTTACATCGTTCTTTGACCACTGGGGCCAGGGAGCGCTGGTCACCGTCTCCGCAG  356
D  100.0% (8/8)     IGHD5-18*01  13   ----------------------------........--------------------------------------------------  20
J  90.9% (40/44)    IGHJ4*02     5    ------------------------------------------.......T..............A.C...............T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_307507

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            333     1e-93
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	N/A	TGGGGG	GGGCGGGATGGCAACCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGGGGGGCGGGATGGCAACCCGACTAC	VGGAGWQPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  L  I  F  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5004   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGACTCATCTTTAGTGACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.8% (228/243)  IGHV3-7*01   47   ....................G...........T...C.......AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  E  Q  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5004   91   AGTGGGTGGCCAACATAGAGCAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.8% (228/243)  IGHV3-7*01   137  .................A....................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  V  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  V  G  G  A  G  W  Q  P  D  
                    Query_5004   181  AGAATTCAGTGTTTCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCTGTGTACTTTTGTGTGGGGGGGGCGGGATGGCAACCCGACT  270
V  93.8% (228/243)  IGHV3-7*01   227  ....C...C...A............C.............................T.AC....---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (6/6)     IGHD3-16*01  17   ---------------------------------------------------------------......---------------------  22
J  100.0% (38/38)   IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                
                                      Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5004   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  304
J  100.0% (38/38)   IGHJ4*02     13   ..................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_307504

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           366     2e-103
IGHD6-19*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAGGGTGGGGCCCA	TATAGTAGTGGCTGGT	TCCCGTG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAGGGTGGGGCCCATATAGTAGTGGCTGGTTCCCGTGTGACTAC	ARDRGWGPYSSGWFPCDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5005   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-30*03  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5005   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTAAGAAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.8% (242/250)  IGHV3-30*03  137  ..................................T.....C.................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  D  T  L  F  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  G  W  G  P  Y  
                    Query_5005   181  AAGACACGCTGTTTCTGCAAATCAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGATAGAGGGTGGGGCCCATATA  270
V  96.8% (242/250)  IGHV3-30*03  227  .GA.........A.........G...............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.8% (15/16)    IGHD6-19*01  4    --------------------------------------------------------------------------------------....  7

                                      IMGT--------------------->                                  
                                      S  S  G  W  F  P  C  D  Y  W  G  Q  G  N  L  V  T  V  S  S  
                    Query_5005   271  GTAGTGGCTGGTTCCCGTGTGACTACTGGGGCCAGGGAAACTTGGTCACCGTCTCCTCAG  330
D  93.8% (15/16)    IGHD6-19*01  8    .C..........------------------------------------------------  19
J  95.1% (39/41)    IGHJ4*02     8    -------------------....................C.C..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_307502

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            343     2e-96
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGGC	GGGGGA	CCTACCGTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGCGGGGGACCTACCGTGTTTGACTAC	ARGGGGPTVFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	56	27	25	2	0	92.6
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  A  S  I  S  S  S  K  W  W  T  W  V  R  Q  P  P  G  K  G  
                    Query_5006   1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTGGTGCCTCCATCAGCAGTAGTAAATGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  94.0% (234/249)  IGHV4-4*02   47   ..A.....TCC...A..................G..................C.......G.............................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  D  I  Y  H  S  G  S  S  N  Y  S  P  S  L  E  S  R  V  T  I  S  V  D  K  S  
                    Query_5006   91   TGGAGTGGATTGGGGATATCTATCATAGTGGGAGCTCCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCA  180
V  94.0% (234/249)  IGHV4-4*02   137  ................A..................A.........A..........A.................................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  G  P  T  V  
                    Query_5006   181  AGAATCAGTTCTCCCTGAAGCTGACATCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCGGCGGGGGACCTACCGTGT  270
V  94.0% (234/249)  IGHV4-4*02   227  ....C...................GC...........................................---------------------  295
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  18   --------------------------------------------------------------------------......----------  23
J  100.0% (43/43)   IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5006   271  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (43/43)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_307503

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           413     2e-117
IGHD2-2*01                                                                                            10.3    137   
IGHJ3*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGAG	CCTGAAGTCTTT	TACCA	CCGAG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATATC	TSLKSFTTEDAFDI	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	74	0	0	100
CDR1-IMGT	76	99	24	18	6	0	75
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	293	5	4	1	0	80
Total	N/A	N/A	292	278	14	0	95.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  
                    Query_5007   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATTCGACTTTACCA  91
V  95.2% (278/292)  IGHV5-51*01  2    ..............................................................................A.AG........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  S  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  D  D  S  D  T  R  Y  
                    Query_5007   92   CCTCTTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAATGGATGGGGGTCATCTATCCTGATGACTCTGATACCAGATACA  181
V  95.2% (278/292)  IGHV5-51*01  92   G..AC.........................................G.........A............G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  S  A  Y  L  Q  W  G  S  L  K  A  S  D  
                    Query_5007   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACAGTGCCTACCTGCAGTGGGGCAGCCTGAAGGCCTCGGACA  271
V  95.2% (278/292)  IGHV5-51*01  182  ................................................G..CC...............A.....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  T  S  L  K  S  F  T  T  E  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  
                    Query_5007   272  CCGCCATGTATTACTGTACGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTT  361
V  95.2% (278/292)  IGHV5-51*01  272  .................G....--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (5/5)     IGHD2-2*01   16   ----------------------------------.....---------------------------------------------------  20
J  100.0% (49/49)   IGHJ3*02     2    --------------------------------------------..............................................  47

                                         
                                      S  
                    Query_5007   362  CAG  364
J  100.0% (49/49)   IGHJ3*02     48   ...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_307500

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     3e-90
IGHD6-19*01                                                                                           18.0    0.66 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	242	26	6	88.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_5008   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.3% (242/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_5008   91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.3% (242/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_5008   181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.3% (242/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_5008   271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.3% (242/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_307508

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGATGGCCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTC	VRQSSDGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  S  Y
                    Query_5009   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCAGTTA  90
V  95.5% (278/291)  IGHV5-51*01  6    ....................................C.......................................AG.........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  T  G  L  E  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  S  P
                    Query_5009   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGTGGATGGGGATCATCTTTCCGGATGACTCTGATACCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ................................A..........................A...T.G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_5009   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  ............................................G.....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                           
                                        K  Y  Y  C  V  R  Q  S  S  D  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_5009   271  CAAGTATTATTGTGTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  355
V  95.5% (278/291)  IGHV5-51*01  276  ..T......C....C......----------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                   
J  100.0% (42/42)   IGHJ6*02     15   -------------------------------------------..........................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_20395

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           341     5e-96
IGHD3-3*01                                                                                            39.1    3e-07
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GA	ATTACGATTTTTGGAGGGGTTAT	AATTCTAATCT	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAATTACGATTTTTGGAGGGGTTATAATTCTAATCTCGGTATGGACGTC	ARNYDFWRGYNSNLGMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	230	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  A  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5010   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTGCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.0% (230/242)  IGHV4-59*01  49   .............................................TA...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  S  S  G  S  T  K  Y  N  P  S  L  G  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5010   91   TGGATTGGCTATGTCTATTCCAGTGGGAGCACCAAGTACAACCCCTCCCTCGGGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.0% (230/242)  IGHV4-59*01  139  ........G...A......A...............C...............AA.....................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  N  Y  D  F  W  R  G  Y  N 
                    Query_5010   181  CAGTTCTCCCTGAAAGTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGAATTACGATTTTTGGAGGGGTTATAAT  270
V  95.0% (230/242)  IGHV4-59*01  229  ..............GC...G..........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.7% (22/23)    IGHD3-3*01   3    ----------------------------------------------------------------................T......---  25

                                      -------------------->                                
                                       S  N  L  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_5010   271  TCTAATCTCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  323
J  100.0% (45/45)   IGHJ6*02     17   --------.............................................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_136670

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           361     4e-102
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5011   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCCCCAGGCAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-33*01  47   ............................................AG..A........................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5011   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  96.4% (240/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  G  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_5011   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGGGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  96.4% (240/249)  IGHV3-33*01  227  ........C.......................A......A............G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_5011   271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_122360

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5012   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_5012   91   CTCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..G...............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G 
                    Query_5012   181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .........................G................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5012   271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_136671

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           363     1e-102
IGHD5-18*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGT	TGGATACAACTATGGTTAC	CCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTTGGATACAACTATGGTTACCCTCACTTTGACTAC	ARGVGYNYGYPHFDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	238	6	0	97.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5013   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.5% (238/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  F  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5013   91   TGGATTGGCTTTATCTATTACACTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGTGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.5% (238/244)  IGHV4-59*01  139  ........G.A...........G......C.............................A..............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  Y  N  Y  G  Y  P 
                    Query_5013   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGGTTGGATACAACTATGGTTACCCT  270
V  97.5% (238/244)  IGHV4-59*01  229  ................................T...............................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD5-18*01  2    --------------------------------------------------------------------........G..........---  20

                                      ----------->                                  
                                       H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5013   271  CACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (45/45)   IGHJ4*02     4    -.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_306071

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_5014   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_5014   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_5014   181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_5014   271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_31048

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            296     2e-82
IGHD1-26*01                                                                                           12.2    33   
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	N/A	GGGAGC	CGACATAGCACAAATGGAGCATTGACAGGGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGGAGCCGACATAGCACAAATGGAGCATTGACAGGGAATGCTTTTCATATC	AGSRHSTNGALTGNAFHI	252	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	137	27	22	5	0	81.5
FR3-IMGT	138	251	114	100	14	0	87.7
CDR3-IMGT (germline)	252	254	3	3	0	0	100
Total	N/A	N/A	251	220	31	0	87.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  I  L  S  C  V  V  S  G  D  R  V  S  S  N  S  A  A  W  G  W  I  R  Q  S  P  S  R  G  
                    Query_5015   4    CCCTGATACTCTCCTGTGTCGTCTCCGGGGACCGTGTCTCTAGCAACAGCGCTGCTTGGGGCTGGATCAGGCAGTCCCCATCGAGAGGCC  93
V  87.6% (220/251)  IGHV6-1*01   50   ....CTC....A......C.A...........A................T.........AA.............................  139
                                         L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R  Q  S  P  S  R  G  

                                      ----------------><--------CDR2-IMGT--------><---------------------------------------------
                                      L  E  W  L  A  R  T  Y  Y  T  S  Q  W  I  H  D  Y  E  D  S  V  K  S  R  I  N  V  N  A  D  
                    Query_5015   94   TTGAGTGGCTGGCTAGGACATACTACACGTCCCAGTGGATTCATGATTATGAAGATTCTGTGAAAAGTCGAATAAATGTCAACGCAGACA  183
V  87.6% (220/251)  IGHV6-1*01   140  ............GA.............G....A.....TA.A.........C..TA...................CCA.....C......  229
                                      L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R  I  T  I  N  P  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      T  S  K  N  Q  I  S  L  Q  L  T  S  V  T  P  E  D  T  A  M  Y  L  C  A  G  S  R  H  S  T  
                    Query_5015   184  CATCCAAGAACCAGATCTCCCTGCAGTTGACCTCTGTGACTCCCGAGGACACGGCTATGTACTTATGTGCAGGGAGCCGACATAGCACAA  273
V  87.6% (220/251)  IGHV6-1*01   230  ..............T...........C...A.........................G....T.AC......-------------------  300
                                      T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A                    
D  100.0% (6/6)     IGHD1-26*01  9    -----------------------------------------------------------------------......-------------  14

                                      -CDR3-IMGT--------------------->                                  
                                      N  G  A  L  T  G  N  A  F  H  I  W  G  Q  G  T  M  V  S  V  S  S  
                    Query_5015   274  ATGGAGCATTGACAGGGAATGCTTTTCATATCTGGGGCCAAGGGACAATGGTCTCCGTGTCTTCAG  339
J  93.8% (45/48)    IGHJ3*02     3    ------------------........G..........................A....C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_31049

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           308     4e-86
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TCCGTGCA	TATTACTTTGATAGGAGT	CCCCGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCCGTGCATATTACTTTGATAGGAGTCCCCGGGACTAC	VRAYYFDRSPRDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	220	23	0	90.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  S  S  D  F  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5016   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTCCAGTGACTTTAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.5% (220/243)  IGHV3-21*01  47   ....................G..................T....AG..A....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  S  S  G  T  Y  I  Y  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  A  
                    Query_5016   91   AGTGGGTCTCATCCATAACTAGTAGTGGCACTTACATATACTACGCAGACTCAGTGACGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  90.5% (220/243)  IGHV3-21*01  137  ................T.G.......A.T.G..........................A......A.........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      R  N  S  M  S  L  Q  M  N  S  L  T  V  D  D  T  A  I  Y  Y  C  V  R  A  Y  Y  F  D  R  S  
                    Query_5016   181  GGAACTCTATGTCTCTGCAAATGAACAGCCTGACAGTCGACGACACGGCTATCTACTACTGTGTCCGTGCATATTACTTTGATAGGAGTC  270
V  90.5% (220/243)  IGHV3-21*01  227  A......AC...A....................G..C...G.........G.G..T.......---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  88.9% (16/18)    IGHD3-22*01  2    -----------------------------------------------------------------------.......A......T...-  19

                                      ---------->                                  
                                      P  R  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5016   271  CCCGGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (40/40)   IGHJ4*02     9    -----........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_31042

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           299     2e-83
IGHD1-26*01                                                                                           10.3    118  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GATCAATTCC	GTGGG	CCGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGGATCAATTCCGTGGGCCGGGCTTGACTAC	VRGSIPWAGLDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	220	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  W  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_5017   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTAATTACTGGATGCACTGGGTCCGCCAAGTTCCGGGGAAGGGGCTGG  90
V  88.4% (220/249)  IGHV3-74*01  47   ....................................C........GC.........................C...A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  S  M  M  G  D  E  R  T  T  R  Y  A  D  F  A  R  G  R  L  T  I  S  R  D  N  A  
                    Query_5017   91   TGTGGGTCTCAAGTATGATGGGAGATGAGAGGACTACTAGATACGCGGACTTCGCGAGGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  88.4% (220/249)  IGHV3-74*01  137  ...........C....T.ATA.T....G...T.GC..A..C..........C..T..A.......T........................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  V  F  L  Q  M  D  S  L  R  A  E  D  T  A  I  Y  Y  C  V  R  G  S  I  P  W  A  G  
                    Query_5017   181  AGAATACGGTGTTTTTGCAAATGGACAGTCTGAGAGCCGAGGACACGGCTATATATTACTGTGTAAGAGGATCAATTCCGTGGGCCGGGC  270
V  88.4% (220/249)  IGHV3-74*01  227  ....C...C...A.C........A..........................G.G..........C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  7    -------------------------------------------------------------------------------.....------  11

                                      ------->                                  
                                      L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5017   271  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (42/42)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_31040

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           371     7e-105
IGHD3-9*01                                                                                            14.1    8.5   
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-9*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCTACG	TTTTGGCTGG	GAGAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTACGTTTTGGCTGGGAGAATGATGCACTTGATATC	ARHLRFGWENDALDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_5018   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  97.2% (244/251)  IGHV4-39*01  49   .........................................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_5018   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACGACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCCGTTGACACGTCC  180
V  97.2% (244/251)  IGHV4-39*01  139  ..........................................T...............................A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  R  F  G  W  E 
                    Query_5018   181  AAGAATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGACATCTACGTTTTGGCTGGGAG  270
V  97.2% (244/251)  IGHV4-39*01  229  .....C.............A.......................................C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-9*01   12   -----------------------------------------------------------------------------.....A....---  21

                                      ----------------->                                  
                                       N  D  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5018   271  AATGATGCACTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  96.0% (48/50)    IGHJ3*02     1    --......TT..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_31041

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           313     1e-87
IGHD1-1*01                                                                                            10.3    122  
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGCTTGGC	ACTGG	CGCCGCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGAGCGCTTGGCACTGGCGCCGCGTGCTTTCGATGTC	TRERLALAPRAFDV	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	23	7	0	76.7
FR3-IMGT	135	248	114	97	17	0	85.1
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	228	28	0	89.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  G  D  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5019   1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCAATTTTGGTGATTATGCTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.1% (228/256)  IGHV3-49*04  47   ....................................CC...................G................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  S  T  T  A  Y  S  A  T  T  E  Y  A  A  S  V  E  D  T  L  T  I  S  R  D  
                    Query_5019   91   AGTGGGTAGGTTTCATTAGCACAACAGCTTATAGTGCGACAACCGAGTACGCCGCGTCTGTGGAGGACACACTCACCATCTCAAGAGATG  180
V  89.1% (228/256)  IGHV3-49*04  137  ...................A.GC.A.......G...G......A..A...............A.A.G..G.T..................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  T  S  N  A  Y  M  Q  M  I  S  P  K  S  E  D  T  D  V  Y  Y  C  T  R  E  R  L  A  L  
                    Query_5019   181  ATTCCACAAGCAACGCCTATATGCAAATGATCAGCCCGAAGAGTGAAGACACAGACGTGTATTATTGTACGAGAGAGCGCTTGGCACTGG  270
V  89.1% (228/256)  IGHV3-49*04  227  ......A.....T.......C.........A.....T...A.CC..G.......C.........C.....T.....--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (5/5)     IGHD1-1*01   7    -------------------------------------------------------------------------------------.....  11

                                      IMGT--------------->                                  
                                      A  P  R  A  F  D  V  G  G  Q  G  T  M  V  T  F  S  S  
                    Query_5019   271  CGCCGCGTGCTTTCGATGTCGGGGGCCAAGGGACAATGGTCACCTTCTCTTCAG  324
J  93.6% (44/47)    IGHJ3*01     4    -------......T......T.......................G.........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_31045

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           297     7e-83
IGHD4-17*01                                                                                           12.2    30   
IGHJ5*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACTA	CTGG	ACGGTG	GCCCCCTCGG	CCCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTACTGGACGGTGGCCCCCTCGGCCC	TTGRWPPRP	242	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	20	22	3	3	0	0	100
CDR1-IMGT	23	46	24	21	3	0	87.5
FR2-IMGT	47	97	51	48	3	0	94.1
CDR2-IMGT	98	127	30	26	4	0	86.7
FR3-IMGT	128	241	114	106	8	0	93
CDR3-IMGT (germline)	242	245	4	4	0	0	100
Total	N/A	N/A	226	208	18	0	92


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><----------C
                                       S  G  V  N  F  G  D  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  F  F  S  S  R 
                    Query_5020   20   TCTGGAGTCAACTTTGGTGATTATGGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTAAGCTTCTTTAGCAGCAGA  109
V  92.0% (208/226)  IGHV3-49*04  73   ......T...C..............C.....G........................................G.T...A....A....A.  162
                                       S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  F  I  R  S  K 

                                      DR2-IMGT---------><----------------------------------------------------FR3-IMGT-----------
                                       A  D  G  G  T  T  E  Y  G  A  A  V  K  R  R  F  T  M  S  R  D  D  S  K  S  I  A  Y  L  Q 
                    Query_5020   110  GCTGATGGTGGGACAACAGAATATGGCGCGGCTGTGAAGCGCAGATTCACGATGTCAAGAGATGATTCCAAAAGCATCGCCTATCTGCAA  199
V  92.0% (208/226)  IGHV3-49*04  163  ...T...................C.C....T.......AG..........C..C....................................  252
                                       A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  D  S  K  S  I  A  Y  L  Q 

                                      -----------------------------------------><--------CDR3-IMGT-------->                     
                                       M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  G  R  W  P  P  R  P  W  G  Q  G  T  L  V 
                    Query_5020   200  ATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGCACTACTGGACGGTGGCCCCCTCGGCCCTGGGGCCAGGGAACCCTGGTC  289
V  92.0% (208/226)  IGHV3-49*04  253  .........................................T....--------------------------------------------  298
                                       M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                                              
D  100.0% (6/6)     IGHD4-17*01  6    --------------------------------------------------......----------------------------------  11
J  97.1% (34/35)    IGHJ5*02     15   ------------------------------------------------------------------........................  38

                                                 
                                       T  V  A  S
                    Query_5020   290  ACCGTCGCCTC  300
J  97.1% (34/35)    IGHJ5*02     39   ......T....  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_125531

Length=311
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           258     3e-71
IGHD5-18*01                                                                                           14.1    7.6  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCAGC	ATACATCTCTGGT	CACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAGCATACATCTCTGGTCACCCCTAC	SAYISGHPY	229	255	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	11	0	0	100
CDR1-IMGT	19	42	24	18	6	0	75
FR2-IMGT	43	93	51	47	4	0	92.2
CDR2-IMGT	94	114	21	15	6	0	71.4
FR3-IMGT	115	228	114	102	12	0	89.5
Total	N/A	N/A	221	193	28	0	87.3


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  P  V  S  V  H  Y  M  S  W  V  R  Q  A  P  G  R  G  L  E  W  V  S  A  I  
                    Query_5021   8    GTGCAGCCTCTGGATTCCCCGTCAGTGTACACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAGGGGACTGGAGTGGGTCTCAGCGATTC  97
V  87.3% (193/221)  IGHV3-53*01  65   .............G...A........AGCA.................................A...G................TT...T  154
                                         A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  

                                      --CDR2-IMGT-----><----------------------------------------------------FR3-IMGT------------
                                      L  T  S  G  K  T  Y  Y  T  D  S  A  M  G  R  F  T  I  S  R  D  S  S  K  N  T  V  N  L  Q  
                    Query_5021   98   TTACCAGTGGTAAGACATACTACACAGACTCCGCGATGGGCCGATTCACCATCTCCAGAGACTCTTCCAAGAACACAGTGAATCTTCAAA  187
V  87.3% (193/221)  IGHV3-53*01  155  A..G.G......GC.........G.........T..A.........................AA............GC..T.........  244
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  

                                      ----------------------------------------><--------CDR3-IMGT-------->                      
                                      M  N  S  L  S  A  G  D  T  A  F  Y  Y  C  S  A  Y  I  S  G  H  P  Y  W  G  Q  G  T  L  V  
                    Query_5021   188  TGAACAGCCTGAGCGCCGGGGACACGGCCTTCTATTACTGTTCAGCATACATCTCTGGTCACCCCTACTGGGGCCAGGGAACCCTGGTCA  277
V  87.3% (193/221)  IGHV3-53*01  245  .............A....A..........G.G.........-------------------------------------------------  285
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                                                  
D  84.6% (11/13)    IGHD5-18*01  5    ----------------------------------------------.....G..A....-------------------------------  17
J  100.0% (38/38)   IGHJ4*02     11   ----------------------------------------------------------------..........................  36

                                                  
                                      T  V  S  S  
                    Query_5021   278  CCGTCTCCTCAG  289
J  100.0% (38/38)   IGHJ4*02     37   ............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 29987844


Query= Query_218455

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           300     8e-84
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGGGTCCT	TATAGTGGGAGC	CCGCAAGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACTTC	AKPGPYSGSPQGYFDF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	10	1	0	90.9
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	49	2	0	96.1
CDR2-IMGT	100	123	24	16	8	0	66.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	230	211	19	0	91.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  S  T  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I  
                    Query_5022   14   GTGCAGTCTCTGGATTCACCTTTAGCACCTTCGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAACTATTA  103
V  91.7% (211/230)  IGHV3-23*01  65   ......C....................G..AT........C..........................................G......  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      T  E  T  G  R  N  S  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  K  N  T  L  Y  L  
                    Query_5022   104  CTGAGACTGGTCGTAATTCATACTACGCAGACTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCAAGAACACACTGTATCTGC  193
V  91.7% (211/230)  IGHV3-23*01  155  G..GT.G....G...GCA............................G....C...............T...........G..........  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  G  P  Y  S  G  S  P  Q  G  Y  F  D  
                    Query_5022   194  AAATGAACACCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACT  283
V  91.7% (211/230)  IGHV3-23*01  245  .........G........................................----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (12/12)   IGHD1-26*01  3    -----------------------------------------------------------............-------------------  14
J  97.8% (45/46)    IGHJ4*02     3    --------------------------------------------------------------------------------..........  12

                                      ->                                  
                                      F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5022   284  TCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  97.8% (45/46)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_98965

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           254     1e-69
IGHD3-10*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTTAGCATGGAC	TGGTACGGGGAGT	CGAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTTAGCATGGACTGGTACGGGGAGTCGACCTACTACTACTACGGGATGGACGTC	RGLAWTGTGSRPTTTTGWTS	237	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	236	114	97	16	1	85.1
CDR3-IMGT (germline)	237	241	5	5	0	0	100
Total	N/A	N/A	242	204	37	1	84.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  M  N  R  H  Y  W  S  W  I  R  Q  P  P  G  G  G  L  E 
                    Query_5023   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGCGGCTCCATGAATAGGCACTATTGGAGTTGGATTCGACAGCCCCCGGGAGGGGGACTGGAG  90
V  84.3% (204/242)  IGHV4-59*08  49   ...................C.........T........C.G...TT....C.....C.....C..G........A..GAA..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       R  I  A  F  I  Y  Y  S  G  T  T  K  S  N  P   P  S  R  G  A  S  P  Y  P  W  T  R  P  G  T
                    Query_5023   91   CGGATTGCGTTCATCTACTACAGTGGGACTACCAAGTCCAACCCC-CCCTCGAGAGGCGCGTCTCCATATCCGTGGACACGACCAGGAAC  179
V  84.3% (204/242)  IGHV4-59*08  139  T......G..AT.....T..........GC.....C.A.......T.....A....T..A...A.......A..A......T...A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                        S  S  P  *  G  *  G  L  *  P  P  Q  T  R  P  F  I  T  A  R  G  L  A  W  T  G  T  G  S  R
                    Query_5023   180  CAGTTCTCCCTGAGGTTGAGGTCTGTGACCGCCGCAGACACGGCCATTTATTACTGCGCGAGGCTTAGCATGGACTGGTACGGGGAGTCG  269
V  84.3% (204/242)  IGHV4-59*08  229  .............A.C....C........................G.G........T.....----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  92.3% (12/13)    IGHD3-10*01  10   ---------------------------------------------------------------------------....T........--  22

                                      GT------------------------>                                 
                                        P  T  T  T  T  G  W  T  S  G  A  E  G  P  R  S  P  S  P   
                    Query_5023   270  ACCTACTACTACTACGGGATGGACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  329
J  96.6% (56/58)    IGHJ6*02     5    --...............T................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_306070

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           344     6e-97
IGHD2-15*01                                                                                           31.5    5e-05
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGAGTTC	TTGTACTGGTGGTAGGTGCTAC	ATGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGAGTTCTTGTACTGGTGGTAGGTGCTACATGTTCTACTACTACGCTGTGGACGTC	AGSSCTGGRCYMFYYYAVDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  V  S  I  S  T  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_5024   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGTCTCCATCAGTACTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  94.7% (233/246)  IGHV4-39*01  49   ...................C...........G.........C.G..G..........................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  S  I  Y  H  S  G  S  A  F  Y  N  P  S  L  E  S  R  V  T  M  S  L  D  T  S 
                    Query_5024   91   CTGGAGTGGATGGGGAGTATCTATCATAGTGGGAGCGCCTTCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCCTTAGACACGTCC  180
V  94.7% (233/246)  IGHV4-39*01  139  ...........T............T...........A...A................A................A...G...........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  C  T  G  G  R 
                    Query_5024   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGGGGAGTTCTTGTACTGGTGGTAGG  270
V  94.7% (233/246)  IGHV4-39*01  229  ..................................................................------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.9% (20/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G.........C  22

                                      DR3-IMGT------------------------>                                 
                                       C  Y  M  F  Y  Y  Y  A  V  D  V  W  G  Q  G  T  T  I  T  V  S  S 
                    Query_5024   271  TGCTACATGTTCTACTACTACGCTGTGGACGTCTGGGGCCAAGGGACCACGATCACCGTCTCCTCA  336
D  90.9% (20/22)    IGHD2-15*01  23   ......------------------------------------------------------------  28
J  94.5% (52/55)    IGHJ6*02     8    -----------...........G.A..........................G..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_98966

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           316     2e-88
IGHD2-2*01                                                                                            14.1    8.7  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGCTCGTTGTGATAA	TACCATCTGC	CCGAAAAACTTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTCGTTGTGATAATACCATCTGCCCGAAAAACTTGCTGGTTCGACCCC	ARGLVVIIPSARKTCWFDP	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  D  I  S  I  N  T  G  D  Y  Y  W  S  W  F  R  Q  S  P  Q  K  G 
                    Query_5025   1    ACCCTGTCCCTCACCTGCACTGTCTCTGATATCTCCATCAACACCGGTGATTACTATTGGAGCTGGTTCCGCCAGTCCCCACAGAAGGGC  90
V  90.7% (225/248)  IGHV4-31*03  49   ............................G.GG........G..GT....G......C.........A........CA....GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  F  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S 
                    Query_5025   91   CTGGAATGGATTGGGTACATCTATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAGGAGTCGAGTTAGCATTTCCATAGACACGTCT  180
V  90.7% (225/248)  IGHV4-31*03  139  .....G..................................A.................A...........C...A..AG...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  V  V  I  I  P 
                    Query_5025   181  AAGAACCAGTTCTCCCTGAAGGTGAACTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGGGGGCTCGTTGTGATAATACCA  270
V  90.7% (225/248)  IGHV4-31*03  229  .....................C...G...........................G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.0% (9/10)     IGHD2-2*01   16   -------------------------------------------------------------------------------------.....  20

                                      3-IMGT----------------------->                                  
                                       S  A  R  K  T  C  W  F  D  P  W  G  P  G  T  L  V  S  V  S  S  
                    Query_5025   271  TCTGCCCGAAAAACTTGCTGGTTCGACCCCTGGGGCCCGGGAACCCTGGTCAGCGTCTCCTCAG  334
D  90.0% (9/10)     IGHD2-2*01   21   G....-----------------------------------------------------------  25
J  95.7% (45/47)    IGHJ5*02     5    -----------------....................A..............C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_308880

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           319     2e-89
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	AGGAATAGGCTGGAGC	ACTATTATAATAGTGGTT	GCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAAGGAATAGGCTGGAGCACTATTATAATAGTGGTTGCCTTGACTCC	ARRNRLEHYYNSGCLDS	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  N  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5026   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAATAGTTATGGCATGCACTGGGTCCGCCAGGCTCCGGGCAAGGGGCTGG  90
V  91.1% (226/248)  IGHV3-30*03  47   ...................................A......G...C.............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  G  I  S  F  D  G  G  N  K  D  Y  A  D  S  V  R  G  R  F  S  I  S  R  D  N  S  
                    Query_5026   91   AGTGGCTGGCAGGTATATCATTTGATGGAGGTAACAAAGACTATGCAGACTCCGTGAGGGGCCGATTCTCCATCTCCAGAGACAATTCCA  180
V  91.1% (226/248)  IGHV3-30*03  137  .....G......T........A.......A....T...T..................A..........A.....................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      N  N  T  V  Y  L  Q  L  N  S  L  S  A  G  D  T  A  V  Y  Y  C  A  R  R  N  R  L  E  H  Y  
                    Query_5026   181  ACAACACAGTATATCTGCAATTGAACAGCCTGAGCGCAGGGGACACGGCTGTCTATTACTGTGCGCGAAGGAATAGGCTGGAGCACTATT  270
V  91.1% (226/248)  IGHV3-30*03  227  .G.....GC.G.........A.............A..T.A............G............A..----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  6    ------------------------------------------------------------------------------------.....G  11

                                      GT-------------------->                                  
                                      Y  N  S  G  C  L  D  S  W  G  L  G  T  L  V  T  V  S  S  
                    Query_5026   271  ATAATAGTGGTTGCCTTGACTCCTGGGGCCTGGGAACCCTGGTCACCGTTTCCTCAG  327
D  88.9% (16/18)    IGHD3-22*01  12   ...G........---------------------------------------------  23
J  92.9% (39/42)    IGHJ4*02     7    ---------------......A........A..................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_308881

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           389     2e-110
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TCCGCGAG	ACTTTGGTTCGGGGA	T	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATCCGCGAGACTTTGGTTCGGGGATCTACGGTATGGACGTC	ARDPRDFGSGIYGMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	270	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  A  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  I  F  S  Y  Y
                    Query_5027   1    GCAGCTGGTGCAGTCTGGAGGAGGCGCGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCATCTTCAGTTACTA  90
V  92.8% (270/291)  IGHV3-33*01  6    ..........G.......G.......T..................................................C.......AG...  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  F  I  Y  Y  D  G  N  N  E  Y  Y  A  D
                    Query_5027   91   TGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGTCATTCATATATTATGATGGAAATAATGAATACTATGCAGA  180
V  92.8% (270/291)  IGHV3-33*01  96   .................................................G..G.T....GG..........G....A.............  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  V  K  G  Q  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A
                    Query_5027   181  CGCCGTGAAGGGACAATTCACCATTTCCAGAGACAACTCCAAGAACACACTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGC  270
V  92.8% (270/291)  IGHV3-33*01  186  .T..........C.G.........C...........T...........G........G................................  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  D  P  R  D  F  G  S  G  I  Y  G  M  D  V  W  G  Q  G  T  P  V  A  V  Y
                    Query_5027   271  TGTGTATTACTGTGCGAGGGATCCGCGAGACTTTGGTTCGGGGATCTACGGTATGGACGTCTGGGGCCAAGGGACCCCGGTCGCCGTCTA  360
V  92.8% (270/291)  IGHV3-33*01  276  ..................A..---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  93.3% (14/15)    IGHD3-10*01  6    -----------------------------...A...........----------------------------------------------  20
J  93.9% (46/49)    IGHJ6*02     14   ---------------------------------------------...............................A.....A......C  58

                                          
                                        S 
                    Query_5027   361  CTCA  364
J  93.9% (46/49)    IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_308886

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           14.1    8.9  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GAGGGCTCGCGGCGTCACTTTTTATTTTAA	TTTGGGG	ACTTCTGGAGGA	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAGGGCTCGCGGCGTCACTTTTTATTTTAATTTGGGGACTTCTGGAGGATGGTTCGACCCC	ARGRARGVTFYFNLGTSGGWFDP	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5028   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGCTCCTTCAGTGGTTACTACTGGAACTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (233/245)  IGHV4-34*01  49   ................................G......................G..................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  T  T  N  S  N  P  S  L  T  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5028   91   TGGATTGGCGAAATCAATCATAGTGGAACCACCAACTCCAACCCGTCGCTCACGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  ........G...................G........A.........C....A.....................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  V  S  L  N  L  R  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  G  R  A  R  G  V  T  F  Y 
                    Query_5028   181  CAGGTCTCCCTGAACCTGCGCTCCGTGACCGCCGCGGACACGGCTATGTATTACTGTGCGAGAGGGAGGGCTCGCGGCGTCACTTTTTAT  270
V  95.1% (233/245)  IGHV4-34*01  229  ...T..........G...A....T.....................G...................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      3-IMGT----------------------------->                                  
                                       F  N  L  G  T  S  G  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5028   271  TTTAATTTGGGGACTTCTGGAGGATGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  100.0% (7/7)     IGHD3-16*01  15   -----.......----------------------------------------------------------  21
J  100.0% (46/46)   IGHJ5*02     6    ------------------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_308887

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5029   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (239/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  P  S  K  N 
                    Query_5029   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACCCGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  ....................................................................A.........A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_5029   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  .............A.............................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5029   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_308884

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ2*01                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTACTATAATCCTAGTGGTTTTTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACTATAATCCTAGTGGTTTTTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGFYGYWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  N  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5030   1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAATAATTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ...........................G............G..G...C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  D  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5030   91   TGGATTGGGGACATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  .........T.T..............................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  F  Y 
                    Query_5030   181  CAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATTACTATAATCCTAGTGGTTTTTAC  270
V  96.3% (236/245)  IGHV4-59*01  229  ...................G...........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.0% (21/25)    IGHD3-22*01  4    -----------------------------------------------------------------.......G..AG........A....  28

                                      -------------------->                                  
                                       G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_5030   271  GGGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  325
J  100.0% (52/52)   IGHJ2*01     2    ---....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_308885

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	74	0	0	100
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	280	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  
                    Query_5031   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCA  93
V  95.6% (280/293)  IGHV5-51*03  2    .................................................................................G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  T  Y  P  G  G  S  N  T  R  Y  
                    Query_5031   94   GCTACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCACCTATCCTGGTGGCTCTAATACCCGATACA  183
V  95.6% (280/293)  IGHV5-51*03  92   ............G.......................A.......................T...........A....G.....A......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  
                    Query_5031   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACA  273
V  95.6% (280/293)  IGHV5-51*03  182  .................................................C...........G...............A.....T......  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_5031   274  CCGCCGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  363
V  95.6% (280/293)  IGHV5-51*03  272  .....A.G...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD6-19*01  5    --------------------------............----------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_5031   364  CCTCAG  369
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_164613

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            322     2e-90
IGHD3-10*01                                                                                           12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCAACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCAACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	104	10	0	91.2
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	226	20	0	91.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_5032   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  91.9% (226/246)  IGHV4-4*01   49   ........................................G..GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  T  N  Y  D  P  A  L  E  S  R  V  T  I  S  V  D  K  S  N 
                    Query_5032   91   GAGTGGATTGGGGAAATCTATCATGGTGGAGCCACCAACTACGACCCGGCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAC  180
V  91.9% (226/246)  IGHV4-4*01   139  ........................A....GAG..........A.....T.....A..................................G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  R  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_5032   181  AACCAATTCTCCCTGAGGCTGACGTCTCTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATCTGGCAACACGTGGCACTCGG  270
V  91.9% (226/246)  IGHV4-4*01   229  .....G..........A.....GC...G...........................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_5032   271  GGTTTTGATTCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  93.0% (40/43)    IGHJ4*02     6    ---.....C.A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_173576

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5033   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_5033   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_5033   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5033   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_164611

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD1-1*01                                                                                            18.0    0.59 
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCAGTG	GGTACAACT	TTGGGAAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGGTACAACTTTGGGAATAACTGGTTCGACCCG	ARDPTGSGYNFGNNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  H  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5034   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGTCATTACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ...............................G..........AG..........A...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  K  G  G  I  T  N  H  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_5034   91   TGGATTGGATATGTCTATAAGGGCGGGATCACCAACCACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  93.1% (228/245)  IGHV4-59*01  139  ........G...A.....T.CA.T....G.......T...................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  H  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_5034   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCTGACACGGCCATATATCACTGTGCGAGAGATCCTACCGGCAGTGGGTACAACTTT  270
V  93.1% (228/245)  IGHV4-59*01  229  ...................................G.........G.G...T.............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD1-1*01   1    -------------------------------------------------------------------------------.........--  9

                                      -------------------->                                  
                                       G  N  N  W  F  D  P  W  G  P  G  T  L  V  T  V  S  S  
                    Query_5034   271  GGGAATAACTGGTTCGACCCGTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  325
J  95.9% (47/49)    IGHJ5*02     3    ------..............C.......A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_164610

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD1-26*01                                                                                           14.1    9.5   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGG	TAGTGGG	CAATACAGTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCT	ARGGSGQYSAYFGS	290	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	68	6	0	91.9
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	106	8	0	93
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	271	22	0	92.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  I  
                    Query_5035   3    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCATCTGGATACAGCTTTATCA  92
V  92.5% (271/293)  IGHV5-51*01  2    ....G........G...................A....................A..............GT................C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  D  W  I  G  W  V  R  Q  K  P  G  K  G  L  D  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  
                    Query_5035   93   GTGACTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGACTGGATGGGGGTCATTTATCCTGGTGACTCTGAAACCAGATATA  182
V  92.5% (271/293)  IGHV5-51*01  92   .CT........................T..................G.........A....C.................T........C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  T  S  L  K  A  S  D  
                    Query_5035   183  GTCCGTCCTTCCAAGGCCAGGTCACCATTTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGACCAGCCTGAAGGCCTCGGACA  272
V  92.5% (271/293)  IGHV5-51*01  182  .C..........................C...................G....................G....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  I  Y  F  C  A  R  G  G  S  G  Q  Y  S  A  Y  F  G  S  W  G  Q  G  T  L  V  T  V  S  
                    Query_5035   273  CCGCCATATACTTCTGTGCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  362
V  92.5% (271/293)  IGHV5-51*01  272  .......G..T.A..........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD1-26*01  5    ----------------------------.......-------------------------------------------------------  11
J  93.6% (44/47)    IGHJ4*02     2    ----------------------------------------------........A..AC...............................  45

                                         
                                      S  
                    Query_5035   363  CAG  365
J  93.6% (44/47)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_164617

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           329     3e-92
IGHD3-16*02                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTATCG	ACATTGGTTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTATTTGACTAT	ARHYRHWLFDY	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  V  S  L  T  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_5036   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGTCTCCCTCACCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  92.0% (230/250)  IGHV4-39*01  50   .....TCC...A....C.............G....A...G..................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  H  K  S  R  V  P  I  S  V  D  T  S  
                    Query_5036   94   TGGAGTGGATTGGGAGTTTGTATTATAGTGGCAGCACCTACTACAACCCGTCCCACAAGAGTCGAGTCCCCATATCCGTGGACACGTCCA  183
V  92.0% (230/250)  IGHV4-39*01  140  .................A.C...........G......................T.............A..........A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  R  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  H  W  L  F  
                    Query_5036   184  AGAACCGCTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATTATCGACATTGGTTATTTG  273
V  92.0% (230/250)  IGHV4-39*01  230  ......AG..C........G....G...T.........................................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*02  25   ----------------------------------------------------------------------......--------------  30
J  97.7% (42/43)    IGHJ4*02     6    --------------------------------------------------------------------------------------....  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5036   274  ACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.7% (42/43)    IGHJ4*02     10   ....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_164616

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           286     1e-79
IGHD4-17*01                                                                                           18.0    0.60 
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCGGCAATGACTACAC	TGAGTACGGTGA	GGCCGCACCCCGGGAGGTG	GGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCGGCAATGACTACACTGAGTACGGTGAGGCCGCACCCCGGGAGGTGGGTCTGGACGTC	ARDGGNDYTEYGEAAPREVGLDV	230	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	20	4	0	83.3
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	20	4	0	83.3
FR3-IMGT	116	229	114	102	12	0	89.5
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	204	21	0	90.7


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  N  G  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  I  I  W  F  D
                    Query_5037   13   GTCTGGATTCACCTTCAATGGTTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAATTATATGGTTTGA  102
V  90.7% (204/225)  IGHV3-33*01  72   .................G.A.C....G.................................................G.........A...  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  N  R  K  D  Y  G  D  S  V  K  G  R  F  I  I  S  R  D  N  F  N  N  K  V  Y  L  E  M  N
                    Query_5037   103  TGGAAATAGGAAAGACTATGGAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTTTAACAATAAGGTGTATCTGGAAATGAA  192
V  90.7% (204/225)  IGHV3-33*01  162  .....G..AT...T......C.......................C.................CC..G..C.C.C........C.......  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------------------CDR3-IMGT--------------
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  G  N  D  Y  T  E  Y  G  E  A  A  P  R  E
                    Query_5037   193  TAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATGGCGGCAATGACTACACTGAGTACGGTGAGGCCGCACCCCGGGA  282
V  90.7% (204/225)  IGHV3-33*01  252  C..........................G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  91.7% (11/12)    IGHD4-17*01  1    ---------------------------------------------------------------...C........---------------  12

                                      --------------->                                 
                                        V  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5037   283  GGTGGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  331
J  97.8% (44/45)    IGHJ6*02     18   ----...A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_98961

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           360     1e-101
IGHD3-3*01                                                                                            27.6    9e-04 
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGGTTGCATCGAT	TTACGATTTTTCGAGTG	ATTCCGGCT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGTTGCATCGATTTACGATTTTTCGAGTGATTCCGGCTTGGACGTC	ARRVASIYDFSSDSGLDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	260	30	0	89.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  T  K  S  G  E  S  L  R  I  S  C  K  A  S  G  Y  I  F  S  T  Y
                    Query_5038   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGACAAAGTCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCTTCTGGATACATCTTTTCCACCTA  90
V  89.7% (260/290)  IGHV5-51*01  6    .............................A....C...............A..............G...........G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  V  V  Y  P  G  D  S  K  T  R  Y  S  L
                    Query_5038   91   TTGGATCGCCTGGGTGCGCCAGGCGCCCGGGAAAGGCCTAGAGTGGATGGGAGTCGTCTATCCTGGTGACTCTAAGACCAGATACAGTCT  180
V  89.7% (260/290)  IGHV5-51*01  96   C.......G.............AT...............G...........GA..A.................G.T...........C.C  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  N  T  A  Y  L  Q  W  K  S  L  K  V  S  D  P  A
                    Query_5038   181  GTCCTTCCAAGGTCAGGTCACCATCTCAGCCGACAGGTCCATCAACACCGCCTATTTACAGTGGAAGAGCCTGAAGGTCTCGGACCCCGC  270
V  89.7% (260/290)  IGHV5-51*01  186  ............C......................A........G.........CC.G.......GC..........C.......A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        I  Y  Y  C  A  R  R  V  A  S  I  Y  D  F  S  S  D  S  G  L  D  V  W  G  Q  G  T  T  V  T
                    Query_5038   271  CATATATTACTGTGCGAGACGGGTTGCATCGATTTACGATTTTTCGAGTGATTCCGGCTTGGACGTCTGGGGCCAAGGGACCACGGTCAC  360
V  89.7% (260/290)  IGHV5-51*01  276  ...G................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  94.1% (16/17)    IGHD3-3*01   4    ---------------------------------...........G.....----------------------------------------  20
J  100.0% (41/41)   IGHJ6*02     22   -----------------------------------------------------------...............................  52

                                                
                                        V  S  S 
                    Query_5038   361  CGTCTCCTCA  370
J  100.0% (41/41)   IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_98962

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           321     7e-90
IGHD6-6*01                                                                                            16.1    2.2  
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-6*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCCGATTCG	GCTCGTCC	GGGGACCTGTATACCTAT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCCGATTCGGCTCGTCCGGGGACCTGTATACCTATTTCGACCCC	ARDLRFGSSGDLYTYFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  A  T  Y  F  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_5039   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTGTCCATCGCTACTTACTTCTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*01  49   ...............................GC......AG..G.....A...................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  S  I  Y  Y  T  G  I  T  K  Y  S  P  S  L  K  S  R  V  T  I  L  L  D  T  S  K  S 
                    Query_5039   91   TGGATTGCGTCTATCTATTACACTGGGATCACCAAGTATAGCCCCTCCCTCAAGAGTCGAGTCACCATATTACTAGACACGTCCAAGAGC  180
V  91.8% (225/245)  IGHV4-59*01  139  .......G..A...........G.....G......C..C.A.............................C.G...............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  E  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  R  F  G  S  S  G  D 
                    Query_5039   181  CAGTTCTCCCTGGAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATCTCCGATTCGGCTCGTCCGGGGAC  270
V  91.8% (225/245)  IGHV4-59*01  229  ............A......G...........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-6*01   11   ----------------------------------------------------------------------------........------  18

                                      -------------------->                                  
                                       L  Y  T  Y  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_5039   271  CTGTATACCTATTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  325
J  97.7% (42/43)    IGHJ5*02     9    ------------.........................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_125536

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           335     4e-94
IGHD6-19*01                                                                                           12.2    32   
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-19*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCTTG	GCACTGGCT	CCTCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATCGCTTGGCACTGGCTCCTCGTGCTTTCGATGTC	TRDRLALAPRAFDV	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	235	21	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  G  D  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5040   1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCAATTTTGGTGATTATGCTATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  91.8% (235/256)  IGHV3-49*04  47   ....................................CC...................G.....................G..........  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  L  G  F  I  R  T  T  A  Y  G  A  T  T  E  Y  A  A  S  V  E  D  R  L  T  I  S  R  D  
                    Query_5040   91   AGTGGTTAGGTTTCATAAGAACAACAGCTTATGGTGCGACAACAGAGTATGCCGCGTCTGTGGAGGACAGACTCACCATCTCAAGAGATG  180
V  91.8% (235/256)  IGHV3-49*04  137  .....G..........T....GC.A...........G.........A..C............A.A.G....T..................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  T  R  D  R  L  A  L  
                    Query_5040   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAGAGTGAAGACACAGCCGTGTATTATTGTACTAGAGATCGCTTGGCACTGG  270
V  91.8% (235/256)  IGHV3-49*04  227  ........................................A.CC..G.................C...........--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  88.9% (8/9)      IGHD6-19*01  8    -----------------------------------------------------------------------------------...G...  14

                                      IMGT--------------->                                  
                                      A  P  R  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5040   271  CTCCTCGTGCTTTCGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
D  88.9% (8/9)      IGHD6-19*01  15   ..----------------------------------------------------  16
J  97.9% (46/47)    IGHJ3*01     4    -------......T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_92828

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           344     6e-97
IGHD3-16*01                                                                                           12.2    33   
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CGATGCCAATC	TGGGGG	GA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCAAAGACGATGCCAATCTGGGGGGATACTTCTACCATGGTATGGACGGC	TKDDANLGGYFYHGMDG	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	238	18	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  S  D  A  W  M  S  W  V  R  Q  V  P  G  K  G  L  
                    Query_5041   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCAGTTTCAGTGACGCCTGGATGAGCTGGGTCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  93.0% (238/256)  IGHV3-15*01  47   .......T.............C..............C.......A...........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  I  D  Y  A  A  A  L  K  G  R  F  T  I  S  R  D  
                    Query_5041   91   AGTGGGTAGGCCGCATTAAAAGCAAAACTGATGGTGGGACGATAGACTACGCTGCAGCCCTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  93.0% (238/256)  IGHV3-15*01  137  .......T.....T..........................A.C.............C..G..............................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  K  R  T  L  Y  M  Q  M  N  S  L  T  T  G  D  T  A  V  Y  Y  C  T  K  D  D  A  N  L  
                    Query_5041   181  ATTCAAAAAGGACGCTGTATATGCAAATGAACAGCCTGACAACCGGGGACACAGCCGTGTATTATTGTACCAAAGACGATGCCAATCTGG  270
V  93.0% (238/256)  IGHV3-15*01  227  .........AC.........C..................A.....A..................C.......C...--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (6/6)     IGHD3-16*01  17   ---------------------------------------------------------------------------------------...  19

                                      DR3-IMGT-------------------->                                 
                                      G  G  Y  F  Y  H  G  M  D  G  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5041   271  GGGGATACTTCTACCATGGTATGGACGGCTGGGGCCAAGGGACCACAGTCACCGTCTCCTCA  332
D  100.0% (6/6)     IGHD3-16*01  20   ...-----------------------------------------------------------  22
J  91.2% (52/57)    IGHJ6*02     6    -----....A....T.C..........T..................G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_29658

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           360     1e-101
IGHD6-6*01                                                                                            12.2    34    
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TGAGTTT	AGCTCCTCC	GCGGAGTATGCGCGTCG	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTGAGTTTAGCTCCTCCGCGGAGTATGCGCGTCGATTACTACAATAACTACGCTATGGACGTC	ARVSLAPPRSMRVDYYNNYAMDV	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	237	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5042   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (237/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_5042   91   TGGATTGGGTATATTAATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAGC  180
V  97.1% (237/244)  IGHV4-59*01  139  ..............CT........................................................................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  V  S  L  A  P  P  R  S  M 
                    Query_5042   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTTCTGTGCGCGAGTGAGTTTAGCTCCTCCGCGGAGTATG  270
V  97.1% (237/244)  IGHV4-59*01  229  ...............C...............................G....A.......A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (8/9)      IGHD6-6*01   10   -----------------------------------------------------------------------.....G...----------  18

                                      3-IMGT----------------------------->                                 
                                       R  V  D  Y  Y  N  N  Y  A  M  D  V  G  G  Q  G  T  T  V  S  V  S  S 
                    Query_5042   271  CGCGTCGATTACTACAATAACTACGCTATGGACGTCGGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  339
J  90.3% (56/62)    IGHJ6*02     1    -------........T.CT......G..........T.....................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_92823

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           280     1e-77
IGHD3-3*02                                                                                            18.0    0.59 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGTCT	CATTTATGGATCGGTTAT	GACCC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGTCTCATTTATGGATCGGTTATGACCCACTTCGACAAC	ARLIYGSVMTHFDN	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	23	7	0	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	248	3	3	0	0	100
Total	N/A	N/A	245	212	33	0	86.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  D  S  I  I  N  N  D  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_5043   4    CCCTGAGACTCTCCTGCAGTGTCTCTGGTGACTCCATCATCAATAATGATTACTATTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGTC  93
V  86.5% (212/245)  IGHV4-39*01  50   .....TCC...A......C...........G........G..G..G.AG......C................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  A  N  I  Y  H  N  G  D  T  L  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_5043   94   TGGAGTGGATCGCCAACATCTATCATAATGGGGACACCCTCTACAATCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACATCCA  183
V  86.5% (212/245)  IGHV4-39*01  140  ..........T.GG.GT......T...G....AG....TA......C.............................C........G....  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      T  D  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  I  Y  G  S  V  M  
                    Query_5043   184  CGGATCAGTTTTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGCGTCTCATTTATGGATCGGTTATGA  273
V  86.5% (212/245)  IGHV4-39*01  230  A.A.C.....C.......A......C.......................................-------------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  83.3% (15/18)    IGHD3-3*02   8    ----------------------------------------------------------------------.....T....GT......--  25

                                      ------------->                                  
                                      T  H  F  D  N  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_5043   274  CCCACTTCGACAACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  321
J  93.3% (42/45)    IGHJ4*02     4    ---....T...T........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_92821

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            397     8e-113
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ5*01                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATC	CGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTCC	ARALRNQLVSDS	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_5044  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.8% (272/290)  IGHV1-8*02  6    .............................................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_5044  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.8% (272/290)  IGHV1-8*02  96   ........A.........................................................C.......................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_5044  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.8% (272/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  S  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_5044  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  353
V  93.8% (272/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  95.1% (39/41)    IGHJ5*01    11   ------------------------------------------...............A.....................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_29659

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD6-25*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTC	ARQSSAGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  S  S  G  Y  D  F  L  D  Y
                    Query_5045   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGAGTTCTGGATACGACTTTCTCGACTA  90
V  94.5% (275/291)  IGHV5-51*01  6    ..............................A.....C...........................G...........AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_5045   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  94.5% (275/291)  IGHV5-51*01  96   ........G.......................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  T  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_5045   181  GTCATTCCAAGGCCAGGTCACCACCTCAGCCGACAAGTCCATCAGAACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (275/291)  IGHV5-51*01  186  ...C...................T.....................C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  H  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  M  V  T  V  S  S
                    Query_5045   271  CAAGTATCACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTC  360
V  94.5% (275/291)  IGHV5-51*01  276  ..T....T.............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------...............................C...............  61

                                       
                                       
                    Query_5045   361  A  361
J  97.9% (47/48)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_92827

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            294     6e-82
IGHD1-26*01                                                                                           10.3    118  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAACTTTCGCGACATAT	GAGCT	CCA	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAACTTTCGCGACATATGAGCTCCATATGGACGTC	AKTFATYELHMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	98	16	0	86
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	216	28	0	88.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  H  N  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_5046   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTCATAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGTAAGGGCCTG  90
V  88.5% (216/244)  IGHV4-4*02   49   ..................G.................A........AG...........G.....................G.....G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  N  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  M  S  M  A  K  L  K 
                    Query_5046   91   GAGTGGATTGGAGAAATCTATCATAACGGCAACACCAACTACAACCCGTCCCTCCAGAGTCGGGTCACCATGTCAATGGCCAAGTTGAAG  180
V  88.5% (216/244)  IGHV4-4*02   139  ...........G.............GT..G.G......................A.......A........A...G.A.A.....CC...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  F  F  L  K  L  N  D  A  T  A  A  D  T  A  V  Y  Y  C  A  K  T  F  A  T  Y  E  L  H 
                    Query_5046   181  AATCAGTTCTTCCTGAAACTGAACGATGCGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAAAACTTTCGCGACATATGAGCTCCAT  270
V  88.5% (216/244)  IGHV4-4*02   229  ..C.......C......G....G.TC..T.....................G.............--------------------------  292
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (5/5)     IGHD1-26*01  11   ---------------------------------------------------------------------------------.....----  15
J  97.7% (42/43)    IGHJ6*02     20   -----------------------------------------------------------------------------------------.  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_5046   271  ATGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  312
J  97.7% (42/43)    IGHJ6*02     21   ...............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_92826

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            353     9e-100
IGHD2-8*02                                                                                            19.9    0.15  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AAAGCGGGCTC	TACTGGTGGT	A	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAAAGCGGGCTCTACTGGTGGTAACTTTGACTAC	ARKAGSTGGNFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  I  F  T  H  Y  W  M  S  W  V  R  Q  A  P  G  K  W  L  
                    Query_5047  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTTACTCACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGTGGCTGG  90
V  95.6% (237/248)  IGHV3-7*03  47   ....................................CC....G.AG.....................................G......  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  D  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5047  91   AGTGGGTTGCCGACATAAAGCAGGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (237/248)  IGHV3-7*03  137  .......G...A..........A...................................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                     K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  K  A  G  S  T  G  G  
                    Query_5047  181  AGAACTCAGTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAAAAGCGGGCTCTACTGGTGGTA  270
V  95.6% (237/248)  IGHV3-7*03  227  ........C.G.........................................................----------------------  294
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD2-8*02  10   -------------------------------------------------------------------------------..........-  19

                                     ---------->                                  
                                     N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5047  271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (45/45)   IGHJ4*02    4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_92824

Length=316
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         366     2e-103
IGHD5-12*01                                                                                           10.3    111   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	GTGGC	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGCGGCCTAC	ARVAAY	241	258	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	111	3	0	97.4
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	240	6	0	97.6


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  V  R  Q  P  P  G  K  G  L 
                    Query_5048     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCATCAGCAGTGGTTACTACTGGGGCTGGGTCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  97.6% (240/246)  IGHV4-38-2*01  49   ...............................................................A..........................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  I  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S  K 
                    Query_5048     91   GAGTGGATTGGGATTATCTACCATAGTGGGAGCACCTACTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTAGACACGTCCAAG  180
V  97.6% (240/246)  IGHV4-38-2*01  139  .............G......T...................................G.................................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----CDR3-IMGT--->            
                                         N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  A  A  Y  W  G  Q  G 
                    Query_5048     181  AACCAGTTCTCCCTGAAGCTGAACTCTGTTACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGTGGCGGCCTACTGGGGCCAGGGA  270
V  97.6% (240/246)  IGHV4-38-2*01  229  ......................G......G....................................------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (5/5)     IGHD5-12*01    10   ------------------------------------------------------------------.....-------------------  14
J  97.4% (37/38)    IGHJ4*02       11   --------------------------------------------------------------------------................  26

                                                              
                                         I  L  V  T  V  S  S  
                    Query_5048     271  ATCCTGGTCACCGTCTCCTCAG  292
J  97.4% (37/38)    IGHJ4*02       27   .C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30515799


Query= Query_100156

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_5049   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  91.0% (222/244)  IGHV4-59*01  50   .....TCC...A..................G........G.AG..A......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S  
                    Query_5049   94   GGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGCC  183
V  91.0% (222/244)  IGHV4-59*01  140  .......G......T..........G.GC.............................A.T......A...................A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F  
                    Query_5049   184  AGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTTG  273
V  91.0% (222/244)  IGHV4-59*01  230  ............A.........................A.......G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------------------------.......C.G..A..  15

                                      ------------------->                                  
                                      G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_5049   274  GTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  327
D  83.3% (15/18)    IGHD5-18*01  16   ...---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    -----...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_29657

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           383     1e-108
IGHD2-2*01                                                                                            33.4    2e-05 
IGHJ2*01                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGAGAGGGACT	AGGATATTGTAGTAGTA	GTGCCGGATGCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGAGAGGGACTAGGATATTGTAGTAGTAGTGCCGGATGCCACTGGTACTTCGATCTC	AREGEGLGYCSSSAGCHWYFDL	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	268	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  R  S  Y
                    Query_5050   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGGAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGGAGTTA  90
V  92.1% (268/291)  IGHV1-69*01  6    ..................G............A....................................................C..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  L  R  Q  A  P  G  Q  G  F  E  W  M  G  G  I  I  P  I  F  G  T  P  N  N  A  Q
                    Query_5050   91   TGCTATCAGTTGGCTACGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGAGGAATCATTCCTATCTTTGGTACCCCAAATAACGCACA  180
V  92.1% (268/291)  IGHV1-69*01  96   .........C...G.G.....................C................G.....C..............AG....CT.......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  Q  G  R  V  T  I  T  A  D  E  N  T  A  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_5050   181  GAATTTCCAGGGCAGAGTCACGATTACCGCGGACGAAAACACGGCCACAGTTTACATGGAACTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  92.1% (268/291)  IGHV1-69*01  186  ...G.................................TC....AG.....CC........G.............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------------CDR3-IMGT--------------------------->           
                                        V  Y  Y  C  A  R  E  G  E  G  L  G  Y  C  S  S  S  A  G  C  H  W  Y  F  D  L  W  G  R  G
                    Query_5050   271  CGTGTACTACTGTGCGAGAGAGGGAGAGGGACTAGGATATTGTAGTAGTAGTGCCGGATGCCACTGGTACTTCGATCTCTGGGGCCGTGG  360
V  92.1% (268/291)  IGHV1-69*01  276  ......T..............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD2-2*01   1    ---------------------------------.................----------------------------------------  17
J  100.0% (51/51)   IGHJ2*01     3    --------------------------------------------------------------............................  30

                                                             
                                        T  L  V  T  V  S  S  
                    Query_5050   361  CACCCTGGTCACTGTCTCCTCAG  383
J  100.0% (51/51)   IGHJ2*01     31   .......................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_29654

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*03                                                                                           304     9e-85
IGHD4-17*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              41.1    1e-07


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTAGA	AAT	TACGGTG	CGAACTCGGACGTCCGGGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAAATTACGGTGCGAACTCGGACGTCCGGGGC	TRNYGANSDVRG	249	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	104	10	0	91.2
CDR3-IMGT (germline)	249	254	6	6	0	0	100
Total	N/A	N/A	254	224	30	0	88.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  Y  K  F  A  D  Y  E  V  S  W  I  R  Q  A  P  G  Q  G  L  
                    Query_5051   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATACAAGTTTGCCGATTATGAAGTGAGTTGGATCCGCCAGGCTCCTGGACAGGGGCTGG  90
V  88.2% (224/254)  IGHV3-49*03  47   ....................A....T.......T..CC....GT.......CTA....C...T.............A..GA.........  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  F  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  N  A  S  G  G  T  P  E  Y  A  A  P  V  E  G  R  F  S  L  S  R  D  
                    Query_5051   91   AGTGGGTAGGATTCATTAGAAGCAATGCTTCTGGAGGGACACCAGAATACGCCGCGCCTGTGGAAGGCAGATTCAGCCTCTCAAGAGATG  180
V  88.2% (224/254)  IGHV3-49*03  137  ..........T..............A....A...T......A..............T.....A............C.A............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------CDR3-IMG
                                      D  S  K  S  I  A  Y  L  E  M  N  S  L  K  I  E  D  T  A  V  Y  Y  C  T  R  N  Y  G  A  N  
                    Query_5051   181  ATTCCAAAAGTATCGCCTATCTGGAAATGAACAGCCTGAAAATCGAGGACACAGCCGTTTACTATTGTACTAGAAATTACGGTGCGAACT  270
V  88.2% (224/254)  IGHV3-49*03  227  ..........C............C..................C...............G..T..C.........----------------  300
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (7/7)     IGHD4-17*01  5    -----------------------------------------------------------------------------.......------  11

                                      T------------>                                
                                      S  D  V  R  G  W  G  R  G  T  R  V  I  V  A  S
                    Query_5051   271  CGGACGTCCGGGGCTGGGGCCGGGGAACCCGGGTCATCGTCGCCTC  316
J  87.9% (29/33)    IGHJ4*02     14   -------------........A........T.....C....T....  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_142730

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_5052   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.9% (279/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_5052   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_5052   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  .......C.....................................C...........G......A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_5052   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.9% (279/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_5052   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_93882

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	289	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	70	4	0	94.6
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	292	275	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  
                    Query_5053   2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCA  91
V  94.2% (275/292)  IGHV5-51*01  2    ....G.....G......................................................A...G............C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  H  W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  
                    Query_5053   92   CCCACTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACA  181
V  94.2% (275/292)  IGHV5-51*01  92   G.T......................G.T..........................G..............G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  H  V  A  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  
                    Query_5053   182  GCCCGTCCTTCCAAGGCCACGTCGCCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACA  271
V  94.2% (275/292)  IGHV5-51*01  182  ...................G...A.....................T.........................A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------CDR3-IMGT--------->                                 
                                      T  A  I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5053   272  CCGCCATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  351
V  94.2% (275/292)  IGHV5-51*01  272  .......G..T...........----------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ----------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_169195

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           327     9e-92
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TC	CGGTGACTAC	GGAAACAGTTTGCCGTC	TGACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCGGTGACTACGGAAACAGTTTGCCGTCTGACAAC	ARSGDYGNSLPSDN	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	20	6	0	76.9
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	126	24	23	1	0	95.8
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  R  A  P  G  K  G  L  E  
                    Query_5054   2    CCCTGTCCCTCACCTGCGCAGCGTCAGGATTCACCTTCAGTAGCTACGGCATGCACTGGGTCCGCCGGGCTCCAGGCAAGGGGCTGGAGT  91
V  92.7% (227/245)  IGHV3-33*01  50   .....AGA...T....T........T....................T...................A.......................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  Q  D  S  V  R  G  R  F  I  I  S  R  D  N  S  R  
                    Query_5054   92   GGGTGGCAGTTATTTGGTATGATGGAAGTAATAAATACTACCAAGACTCCGTGAGGGGTCGATTCATCATCTCCAGAGACAATTCCAGGA  181
V  92.7% (227/245)  IGHV3-33*01  140  .............A..........................TGC...........A...C.......C....................A..  229
                                      W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  G  D  Y  G  N  S  L  
                    Query_5054   182  ACACACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGATCCGGTGACTACGGAAACAGTTTGC  271
V  92.7% (227/245)  IGHV3-33*01  230  ....G....A.......................................................-------------------------  294
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (10/10)   IGHD4-17*01  7    -------------------------------------------------------------------..........-------------  16

                                      ---------->                                 
                                      P  S  D  N  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_5054   272  CGTCTGACAACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCA  315
J  95.0% (38/40)    IGHJ4*02     8    ----....T.............A.....................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_142733

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATTTGCTGA	TTCGGGGA	TTGAAAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGTC	AKFADSGIETYGMDV	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	73	1	0	98.6
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	110	4	0	96.5
CDR3-IMGT (germline)	291	294	4	4	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  
                    Query_5055   4    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTATCA  93
V  95.9% (279/291)  IGHV5-51*01  2    ....G..................................................................................C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  F  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  C  L  G  I  I  D  P  R  D  S  D  T  T  Y  
                    Query_5055   94   GCTTCTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGCTTGGGGATCATCGATCCTCGTGACTCTGATACCACATACA  183
V  95.9% (279/291)  IGHV5-51*01  92   ...A........G....................................GA...........T.....G...............G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  T  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_5055   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  95.9% (279/291)  IGHV5-51*01  182  .................................C...........T............................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  Y  C  A  K  F  A  D  S  G  I  E  T  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_5055   274  CCGCCATGTATTATTGTGCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCT  363
V  95.9% (279/291)  IGHV5-51*01  272  .............C.......---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (8/8)     IGHD3-10*01  13   -------------------------------........---------------------------------------------------  20
J  98.0% (48/49)    IGHJ6*02     14   ----------------------------------------------............................................  57

                                           
                                      S  S 
                    Query_5055   364  CTTCA  368
J  98.0% (48/49)    IGHJ6*02     58   .C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_169193

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           349     2e-98
IGHD3-16*02                                                                                           33.4    1e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCAGGCCGG	TTACGTTTGGGGGAGGTTTCGTT	TTTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCAGGCCGGTTACGTTTGGGGGAGGTTTCGTTTTTCCTACGTTGACCAC	ARGQAGYVWGRFRFSYVDH	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  E  S  F  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5056   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGAGTCCTTCAGTGGTTACTACTGGAACTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.5% (234/245)  IGHV4-34*01  49   ...............................G.......................G..................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  R  H  S  G  S  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5056   91   TGGATTGGGGAAATCAGGCATAGTGGAAGCACCTACTACAACGCGTCCCTCAAGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-34*01  139  ................AT...............A........C...............................A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  R  L  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  Q  A  G  Y  V  W  G  R 
                    Query_5056   181  CAGTTCTCCCTGAGGTTGACCTCTGTGAGCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCCAGGCCGGTTACGTTTGGGGGAGG  270
V  95.5% (234/245)  IGHV4-34*01  229  .............A.C...G........C....................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  91.3% (21/23)    IGHD3-16*02  10   --------------------------------------------------------------------------...............T  25

                                      ----------------------->                                  
                                       F  R  F  S  Y  V  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5056   271  TTTCGTTTTTCCTACGTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  91.3% (21/23)    IGHD3-16*02  26   .A.....---------------------------------------------------  32
J  95.7% (45/47)    IGHJ4*02     2    -----------....T.....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_169192

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           283     1e-78
IGHD3-3*01                                                                                            18.0    0.56 
IGHJ4*01                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGCA	N/A	TTATTATAC	GGGGACCTATCCAC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATTATTATACGGGGACCTATCCACTTGACCAC	ARHYYTGTYPLDH	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	10	11	0	47.6
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	213	32	0	86.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  S  W  S  W  I  R  Q  F  P  G  K  G  L  E 
                    Query_5057   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTACTCCTGGAGTTGGATCCGGCAGTTCCCAGGGAAGGGACTGGAG  90
V  86.9% (213/245)  IGHV4-59*08  49   ...............................G..........A......A......C............CC...................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  R  A  H  D  M  K  T  N  Y  N  P  S  L  K  N  R  L  T  I  S  V  D  T  S  R  S 
                    Query_5057   91   TGGATTGGATATAGGGCTCACGATATGAAGACCAACTACAACCCCTCCCTCAAGAATCGACTCACCATATCAGTGGACACGTCCAGGAGC  180
V  86.9% (213/245)  IGHV4-59*08  139  ........G....TCTA.T..AG.GG..GC.........................G....G.............A..........A..A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  V  A  L  E  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  H  Y  Y  T  G  T  Y  P  L 
                    Query_5057   181  CAGGTCGCCCTGGAGTTGACCTCTGTGACCGCCGCAGACACGGCCATATATTATTGTGCGAGGCATTATTATACGGGGACCTATCCACTT  270
V  86.9% (213/245)  IGHV4-59*08  229  ...T..T.....A..C...G.........................G.G.....C........A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD3-3*01   22   -----------------------------------------------------------------.........----------------  30
J  92.5% (37/40)    IGHJ4*01     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                
                                       D  H  W  G  H  G  I  L  V  T  V  S  S
                    Query_5057   271  GACCACTGGGGCCACGGAATCCTGGTCACCGTCTCCTC  308
J  92.5% (37/40)    IGHJ4*01     9    ...T..........A....C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_169191

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     5e-96
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGG	AGCAGCAGCTGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGGAGCAGCAGCTGGTTGACTAC	ARDLEQQLVDY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	24	17	4	3	70.8
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	250	236	11	3	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_5058   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCAGTAGTTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  94.4% (236/250)  IGHV3-21*01  47   ............................T.................C.....C............................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  T  T  T     Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5058   91   AGTGGGTCTCATCCATTAGCACTACTACT---TACATATACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  177
V  94.4% (236/250)  IGHV3-21*01  137  ...................T.G..G..G.AGT..............A...........................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  E  Q  Q  L  V  
                    Query_5058   178  AGAACTCAGTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGGAGCAGCAGCTGGTTG  267
V  94.4% (236/250)  IGHV3-21*01  227  ........C.....C.......................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD6-13*01  7    ---------------------------------------------------------------------------............---  18
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5058   268  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (42/42)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_21622

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           338     4e-95
IGHD2-21*02                                                                                           19.9    0.15 
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGTG	GGTGGTGACT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGTGGGTGGTGACTACTACTTTGACTAC	ARGVGGDYYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  I  S  S  G  H  Y  W  S  W  I  R  Q  R  P  G  K  G 
                    Query_5059   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCATCAGTAGTGGTCACTACTGGAGCTGGATCCGCCAGCGCCCAGGGAAGGGC  90
V  93.2% (233/250)  IGHV4-31*01  49   ..................A.....................G....G.....T........................A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  K  T  Y  Y  N  P  S  L  K  S  L  V  A  I  S  V  D  T  S 
                    Query_5059   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAAAACCTACTACAACCCGTCCCTCAAGAGCCTAGTTGCCATATCAGTGGACACGTCT  180
V  93.2% (233/250)  IGHV4-31*01  139  ..................................GC..........................T......A..........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  E  F  S  L  K  M  N  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  G  D  Y  Y 
                    Query_5059   181  AAGAATGAGTTCTCCCTAAAGATGAACTCTATGACGGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGAGTGGGTGGTGACTACTAC  270
V  93.2% (233/250)  IGHV4-31*01  229  .....CC..........G...C...G....G....T..................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (10/10)   IGHD2-21*02  11   ---------------------------------------------------------------------------..........-----  20
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_5059   271  TTTGACTACTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    ......................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_142738

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           335     4e-94
IGHD6-19*01                                                                                           12.2    32   
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-19*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCTTG	GCACTGGCT	CCTCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATCGCTTGGCACTGGCTCCTCGTGCTTTCGATGTC	TRDRLALAPRAFDV	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	235	21	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  G  D  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5060   1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCAATTTTGGTGATTATGCTATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  91.8% (235/256)  IGHV3-49*04  47   ....................................CC...................G.....................G..........  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  L  G  F  I  R  T  T  A  Y  G  A  T  T  E  Y  A  A  S  V  E  D  R  L  T  I  S  R  D  
                    Query_5060   91   AGTGGTTAGGTTTCATAAGAACAACAGCTTATGGTGCGACAACAGAGTATGCCGCGTCTGTGGAGGACAGACTCACCATCTCAAGAGATG  180
V  91.8% (235/256)  IGHV3-49*04  137  .....G..........T....GC.A...........G.........A..C............A.A.G....T..................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  T  R  D  R  L  A  L  
                    Query_5060   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAGAGTGAAGACACAGCCGTGTATTATTGTACTAGAGATCGCTTGGCACTGG  270
V  91.8% (235/256)  IGHV3-49*04  227  ........................................A.CC..G.................C...........--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  88.9% (8/9)      IGHD6-19*01  8    -----------------------------------------------------------------------------------...G...  14

                                      IMGT--------------->                                  
                                      A  P  R  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5060   271  CTCCTCGTGCTTTCGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
D  88.9% (8/9)      IGHD6-19*01  15   ..----------------------------------------------------  16
J  97.9% (46/47)    IGHJ3*01     4    -------......T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_142739

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           321     7e-90
IGHD3-10*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CGAGTCAAATCCTC	TGGTTCGGGGAG	GGCAAAA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCGAGTCAAATCCTCTGGTTCGGGGAGGGCAAAAACTACTTTGACCAC	AKASQILWFGEGKNYFDH	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  N  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5061   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAATAACTTTGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.2% (227/249)  IGHV3-30*18  47   ....................G.....................G..G..A...C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  Y  D  G  S  K  K  F  Y  A  D  S  L  R  G  R  F  T  I  S  R  D  S  S  
                    Query_5061   91   AGTGGCTGGCAGTTATTTCATATGATGGAAGTAAAAAGTTCTATGCAGACTCCTTGAGGGGCCGATTTACCATCTCCAGAGACAGCTCCA  180
V  91.2% (227/249)  IGHV3-30*18  137  .....G..........A.................T..A.A.............G...A.........C................AT....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  S  S  L  G  A  E  D  T  A  V  Y  Y  C  A  K  A  S  Q  I  L  W  F  
                    Query_5061   181  AGAACACACTGTATCTCCAAATGAGCAGCCTGGGCGCTGAGGACACGGCTGTCTATTATTGTGCGAAAGCGAGTCAAATCCTCTGGTTCG  270
V  91.2% (227/249)  IGHV3-30*18  227  .......G........G.......A.......A.A.................G.....C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD3-10*01  10   -----------------------------------------------------------------------------------.......  16

                                      IMGT--------------------->                                  
                                      G  E  G  K  N  Y  F  D  H  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_5061   271  GGGAGGGCAAAAACTACTTTGACCACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  330
D  100.0% (12/12)   IGHD3-10*01  17   .....-------------------------------------------------------  21
J  95.8% (46/48)    IGHJ4*02     1    ------------...........T.......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_21621

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         413     2e-117
IGHD4-17*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATTTTCA	TGACTACGATGAC	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTCATGACTACGATGACAACTACTTTGACCAG	ARHFHDYDDNYFDQ	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	72	3	0	96
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	109	5	0	95.6
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	294	279	15	0	94.9


Alignments

                                        <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                         E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  D  T  F  T 
                    Query_5062     4    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGAGACACCTTTACC  93
V  94.9% (279/294)  IGHV5-10-1*01  1    ..A..G........G...............................................................T...G.......  90
                                         E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T 

                                        GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                         N  Y  W  I  S  W  V  R  Q  R  P  G  K  G  L  E  W  M  G  R  I  D  P  R  E  S  Y  N  D  Y 
                    Query_5062     94   AACTACTGGATCAGCTGGGTGCGCCAGAGGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTCGTGAATCTTATAACGATTAC  183
V  94.9% (279/294)  IGHV5-10-1*01  91   .G..........................T........................................A....C.......C.A.C...  180
                                         S  Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y 

                                        -----------------------------------------------FR3-IMGT-----------------------------------
                                         S  P  S  F  Q  G  H  V  S  I  S  A  D  Q  S  T  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 
                    Query_5062     184  AGCCCGTCCTTCCAAGGCCACGTCAGCATCTCAGCTGACCAGTCCACCAGCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGAC  273
V  94.9% (279/294)  IGHV5-10-1*01  181  .........................C.............A......T...........................................  270
                                         S  P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                        -----------------><----------------CDR3-IMGT--------------->                              
                                         T  A  M  Y  Y  C  A  R  H  F  H  D  Y  D  D  N  Y  F  D  Q  W  G  Q  G  T  L  V  T  V  S 
                    Query_5062     274  ACCGCCATGTATTACTGTGCGAGACATTTTCATGACTACGATGACAACTACTTTGACCAGTGGGGCCAGGGAACCCTGGTCACTGTCTCC  363
V  94.9% (279/294)  IGHV5-10-1*01  271  ........................------------------------------------------------------------------  294
                                         T  A  M  Y  Y  C  A  R                                                                   
D  92.3% (12/13)    IGHD4-17*01    1    --------------------------------........G....---------------------------------------------  13
J  93.8% (45/48)    IGHJ4*02       1    ----------------------------------------------...........T.C.......................C......  44

                                            
                                         S  
                    Query_5062     364  TCAG  367
J  93.8% (45/48)    IGHJ4*02       45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_169199

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD6-13*01                                                                                           18.0    0.55  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CACG	AGCAGCTGG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACACGAGCAGCTGGATTGACTAC	ARDTSSWIDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5063   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ...............................G...........G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  T  G  S  T  N  Y  N  P  S  L  K  S  Q  F  T  I  S  V  D  T  S  K  N 
                    Query_5063   91   TGGATTGGGTATATCTTTTACACTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCAATTCACCATATCAGTAGACACGTCGAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  ................A.....G...................................G.G......................C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  S  S  W  I  D  Y  W 
                    Query_5063   181  CAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACACGAGCAGCTGGATTGACTACTGG  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-13*01  10   ---------------------------------------------------------------------.........------------  18
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------...........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_5063   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (42/42)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_169198

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           374     9e-106
IGHD4-17*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GGTCATC	GACTACGGTGACTAC	GTCG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGAGGTCATCGACTACGGTGACTACGTCGACTTCTACTATTACGGAATGGACGTC	ATEVIDYGDYVDFYYYGMDV	290	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	175	30	25	5	0	83.3
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	297	8	7	1	0	87.5
Total	N/A	N/A	297	268	29	0	90.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  K  P  G  E  S  L  R  V  S  C  A  A  S  G  L  S  F  K  N  A
                    Query_5064   1    GCAGCTGGTGCAGTCTGGGGGAGGCTTGGTTAAGCCTGGAGAGTCCCTCAGAGTCTCCTGTGCAGCCTCTGGACTCAGCTTCAAAAACGC  90
V  90.2% (268/297)  IGHV3-15*01  6    ..........G...................A........G.G......T...C....................T...CT....GT.....  95
                                        Q  L  V  E  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A

                                      ---><--------------------FR2-IMGT---------------------><----------CDR2-IMGT---------><----
                                        W  M  T  W  V  R  Q  S  P  G  K  G  L  E  W  V  G  R  I  R  S  R  T  D  G  G  T  A  D  Y
                    Query_5064   91   CTGGATGACCTGGGTCCGCCAGTCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGCATTAGAAGCAGAACCGATGGTGGGACGGCAGACTA  180
V  90.2% (268/297)  IGHV3-15*01  96   ........G.............G...............................T....A.....A...T...........AA.......  185
                                        W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y

                                      ------------------------------------------------FR3-IMGT----------------------------------
                                        A  A  P  V  K  G  R  F  I  I  S  R  D  E  S  K  T  T  L  Y  L  Q  M  N  S  L  K  T  E  D
                    Query_5064   181  CGCTGCACCCGTGAAAGGCAGATTCATCATCTCAAGAGATGAATCGAAGACCACCCTTTATCTTCAAATGAACAGCCTGAAAACCGAGGA  270
V  90.2% (268/297)  IGHV3-15*01  186  ..........................C...............T..A..A.A...G..G.....G..........................  275
                                        A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D

                                      ------------------><-------------------------CDR3-IMGT------------------------>           
                                        T  A  V  Y  Y  C  A  T  E  V  I  D  Y  G  D  Y  V  D  F  Y  Y  Y  G  M  D  V  W  G  Q  G
                    Query_5064   271  CACAGCCGTCTATTACTGTGCCACAGAGGTCATCGACTACGGTGACTACGTCGACTTCTACTATTACGGAATGGACGTCTGGGGCCAAGG  360
V  90.2% (268/297)  IGHV3-15*01  276  .........G.........A.......---------------------------------------------------------------  302
                                        T  A  V  Y  Y  C  T  T                                                                  
D  100.0% (15/15)   IGHD4-17*01  2    ----------------------------------...............-----------------------------------------  16
J  89.8% (53/59)    IGHJ6*02     4    -----------------------------------------------------...A......C.....T....................  40

                                                            
                                        S  S  V  T  V  S  S 
                    Query_5064   361  GAGTTCGGTCACCGTCTCCTCA  382
J  89.8% (53/59)    IGHJ6*02     41   ..CCA.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_306677

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           332     3e-93
IGHD3-22*01                                                                                           46.8    1e-09
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	C	TATTACTATGAAAGTAGTGCTTATTACTAC	GGCAGG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGACTATTACTATGAAAGTAGTGCTTATTACTACGGCAGG	AKDYYYESSAYYYGR	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  G  G  F  R  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5065   1    GGTCCCTGAGACTCTCCTGTGCAGGCGGTGGATTCAGGTTCAGTTCCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-30*18  47   ........................C.TC........CC......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  S  D  G  S  I  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_5065   91   AGTGGGTGGCAGTAATATCATCTGATGGAAGCATTAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATCCCC  180
V  92.4% (231/250)  IGHV3-30*18  137  .............T.......A.........T.A....................................................T..A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      Q  F  T  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  Y  Y  Y  E  S  S  
                    Query_5065   181  AGTTCACGTTGCATTTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCCAAAGACTATTACTATGAAAGTAGTG  270
V  92.4% (231/250)  IGHV3-30*18  227  ..AA....C..T..C.................................................G.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (28/30)    IGHD3-22*01  2    -----------------------------------------------------------------------...........T.......  20

                                      ---------------->                                  
                                      A  Y  Y  Y  G  R  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_5065   271  CTTATTACTACGGCAGGTGGGGCCAGGGAACCCAAGTCACCGTCTCCTCAG  321
D  93.3% (28/30)    IGHD3-22*01  21   G..........----------------------------------------  31
J  94.1% (32/34)    IGHJ4*02     15   -----------------................TG................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_306676

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           349     2e-98
IGHD1-20*01                                                                                           10.3    120  
IGHJ6*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TAGC	GGTAT	TGGCCGGTCGTTGGTCCGC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTAGCGGTATTGGCCGGTCGTTGGTCCGCTATGGCCGTC	ARVAVLAGRWSAMAV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  W  I  H  W  V  R  Q  G  P  G  K  G  L  
                    Query_5066   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTCAGTAGTTACTGGATACACTGGGTCCGCCAAGGTCCAGGAAAGGGGCTGA  90
V  94.8% (236/249)  IGHV3-74*01  47   ......................................T.......C........G................C......G.........G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      M  W  V  S  R  I  N  S  D  G  S  G  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5066   91   TGTGGGTCTCACGTATTAATAGTGATGGGAGTGGCACAAGTTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (236/249)  IGHV3-74*01  137  ................................A.......C.................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  D  Q  D  T  A  V  Y  Y  C  A  R  V  A  V  L  A  G  R  
                    Query_5066   181  AGAACACGGTGTATCTGCAAATGAACAGTCTCAGAGACCAGGACACGGCTGTCTATTACTGTGCAAGAGTAGCGGTATTGGCCGGTCGTT  270
V  94.8% (236/249)  IGHV3-74*01  227  ........C......................G....C.G.............G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-20*01  1    -------------------------------------------------------------------------.....------------  5

                                      ---------------->                              
                                      W  S  A  M  A  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_5066   271  GGTCCGCTATGGCCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  317
J  97.5% (39/40)    IGHJ6*02     20   -------.....A..................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_306675

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           318     5e-89
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGAGTCCCATGAAGCCTTGGATATC	AGESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_5067   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_5067   91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.4% (224/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  E  S  H  E  A  L  D  I  W 
                    Query_5067   181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGGGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.4% (224/245)  IGHV4-59*02  229  ...........G.A.................................G............A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_5067   271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_93881

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           408     4e-116
IGHD2-21*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	ATTTTGGTGG	ATAGAGATAGAGTTCC	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTC	ARGGFWWIEIEFRMDV	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	74	1	0	98.7
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	106	8	0	93
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	278	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_5068   1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACC  90
V  94.2% (278/295)  IGHV1-18*01  1    .....T.............................................................................C......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  G  I  T  W  A  R  Q  A  P  G  Q  G  L  E  W  V  G  W  I  S  A  Y  T  G  N  T  K  N 
                    Query_5068   91   GACTATGGTATCACCTGGGCGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGATGGATCAGCGCTTACACTGGTAATACAAAAAAT  180
V  94.2% (278/295)  IGHV1-18*01  91   AG...........G.....T...............................A.....................A......C.....CT..  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  V  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_5068   181  GCACAAAAAGTCCAGGGCAGAGTGACCATGACCACAGACACATCCACGAGAACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGAC  270
V  94.2% (278/295)  IGHV1-18*01  181  .....G..GC.............C..........................C...............C.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  G  G  F  W  W  I  E  I  E  F  R  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_5068   271  ACGGCCGTGTATTACTGTGCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTCTGGGGCCAAGGGACCACGGTCACC  360
V  94.2% (278/295)  IGHV1-18*01  271  .........................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  90.0% (9/10)     IGHD2-21*01  6    -----------------------------...G......---------------------------------------------------  15
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------------...................................  53

                                               
                                       V  S  S 
                    Query_5068   361  GTCTCCTCA  369
J  100.0% (44/44)   IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_306673

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           386     1e-109
IGHJ3*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GGGGCCTTCAA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCTTCAAGATGCTTTTGATATC	ARGGLQDAFDI	288	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	70	4	0	94.6
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	173	21	16	5	0	76.2
FR3-IMGT	174	287	114	110	4	0	96.5
CDR3-IMGT (germline)	288	294	7	7	0	0	100
Total	N/A	N/A	291	269	22	0	92.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  
                    Query_5069   4    AGGTTCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTTAGGCTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGCG  93
V  92.4% (269/291)  IGHV3-53*01  2    ....G.........G.....................................G..A................................TA  91
                                         V  Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  

                                      T------><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------
                                      A  Y  F  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  I  M  Y  T  G  G  F  T  Y  Y  A  
                    Query_5069   94   CCTACTTCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTAGAGTGGGTCTCAATTATGTATACCGGTGGATTCACATACTACGCGG  183
V  92.4% (269/291)  IGHV3-53*01  92   G.A...A.....G...........................G..G............G....T....G......TAG............A.  181
                                      S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  N  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  
                    Query_5069   184  ACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAACAACACCCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGG  273
V  92.4% (269/291)  IGHV3-53*01  182  ...........................................G.....G........................................  271
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  

                                      -------------><-----------CDR3-IMGT----------->                                  
                                      A  V  Y  Y  C  A  R  G  G  L  Q  D  A  F  D  I  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_5069   274  CCGTCTATTACTGTGCGAGAGGGGGCCTTCAAGATGCTTTTGATATCTGGGGCCAAGGCACAAGGGTCACCGTCTCTTCAG  354
V  92.4% (269/291)  IGHV3-53*01  272  ....G................------------------------------------------------------------  292
                                      A  V  Y  Y  C  A  R                                                              
J  95.9% (47/49)    IGHJ3*02     2    --------------------------------..........................G....T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_306672

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           308     4e-86
IGHD6-19*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGTGGC	CAGTGGC	CGGCGGAATAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTGGCCAGTGGCCGGCGGAATATTACTTTGACTTC	ARDGGQWPAEYYFDF	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	224	27	0	89.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  G  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_5070   1    ACCCTGTCCCTCACCTGCAGTGTTTCTGGTGGCTCCATCAGCGGTAGCAGTTACTACTGGGGCTGGATCCGCCAGCCCCCCGGGAAGGGC  90
V  89.2% (224/251)  IGHV4-39*02  49   ...................C...C..................A....T................................A........G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  V  Y  Y  S  G  T  T  H  D  N  P  S  L  K  S  R  V  T  L  S  V  D  T  S 
                    Query_5070   91   CTAGAGTGGATTGGGAGTGTCTACTATAGTGGGACCACTCACGACAACCCGTCCCTCAAGAGTCGCGTCACCCTGTCCGTTGACACGTCC  180
V  89.2% (224/251)  IGHV4-39*02  139  ..G...............A....T..........G...CT..T......................A......A.A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  G  L  Y  F  C  A  R  D  G  G  Q  W  P  A 
                    Query_5070   181  AAGAACCAGTTCTCCCTGAGGCTGAACTCTGTCACCGCCGCAGACACGGGTCTATACTTTTGTGCGAGAGATGGTGGCCAGTGGCCGGCG  270
V  89.2% (224/251)  IGHV4-39*02  229  ........C..........A.....G......G................C.G.G..T.AC...........-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD6-19*01  9    ------------------------------------------------------------------------------.......-----  15

                                      ----------------->                              
                                       E  Y  Y  F  D  F  W  G  Q  G  K  L  V  V  V  S 
                    Query_5070   271  GAATATTACTTTGACTTCTGGGGCCAGGGAAAGCTGGTCGTCGTCTCC  318
J  88.1% (37/42)    IGHJ4*02     3    ------..........A..............CC......AC.......  44


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_306670

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	ATTTCTTAGGG	GCTCGTC	AGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACATTTCTTAGGGGCTCGTCAGGCTTTCACTAC	TFLRGSSGFHY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	101	13	0	88.6
CDR3-IMGT (germline)	249	250	2	2	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  D  L  D  W  V  R  Q  A  S  G  K  G  L  
                    Query_5071   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGATTTGGACTGGGTCCGCCAGGCTTCCGGGAAAGGCCTGG  90
V  90.8% (227/250)  IGHV3-73*01  47   .........A.........................................C.A..C............................G....  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  M  R  T  K  D  D  N  Y  A  T  L  Y  A  A  S  V  R  G  R  F  T  I  S  R  D  
                    Query_5071   91   AGTGGGTTGGCCGTATGAGAACCAAAGATGACAATTACGCGACACTATATGCTGCGTCGGTGAGAGGCAGGTTCACCATCTCCAGAGATG  180
V  90.8% (227/250)  IGHV3-73*01  137  ................T....G.....C.A...G..........GC.................A..........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  N  M  A  Y  L  Q  M  S  G  L  D  T  E  D  T  A  L  Y  F  C  T  F  L  R  G  S  S  
                    Query_5071   181  ATTCAAAGAACATGGCTTATCTGCAAATGAGCGGCCTGGACACCGAGGACACGGCCCTTTACTTCTGTACATTTCTTAGGGGCTCGTCAG  270
V  90.8% (227/250)  IGHV3-73*01  227  ............C...G.............A.A.....A.A...............G.G..T.A......--------------------  296
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------.......--  17

                                      ---------->                                  
                                      G  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5071   271  GCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (43/44)    IGHJ4*02     5    -....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_21627

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           363     2e-102
IGHD3-16*02                                                                                           27.6    9e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGC	TTTGGGGGATTTATCGT	CATTAGTGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCTTTGGGGGATTTATCGTCATTAGTGGGCTTTGACTAC	ARALGDLSSLVGFDY	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	69	5	0	93.2
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	101	13	0	88.6
CDR3-IMGT (germline)	290	294	5	5	0	0	100
Total	N/A	N/A	292	262	30	0	89.7


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  N  F  S  
                    Query_5072   3    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAAATCTCCTGTAAGGTGTCGGGATACAACTTTAGTA  92
V  89.7% (262/292)  IGHV5-51*03  2    ..G....................................................G.............GT..T.......G.....CC.  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  A  W  M  G  I  I  F  P  D  V  S  D  T  R  Y  
                    Query_5072   93   ATTACTGGATTGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGCTTGGATGGGGATCATCTTTCCTGATGTCTCTGACACCAGATACA  182
V  89.7% (262/292)  IGHV5-51*03  92   GC........C..................................AG................A.....G..A......T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  P  V  T  M  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  
                    Query_5072   183  GTCCGTCGTTCCAAGGCCCGGTCACCATGTCAGTCGACAAGTCCATTAGTACCGCCTACCTCCAGTGGAGCAGCCTGGAGGCCTCGGACA  272
V  89.7% (262/292)  IGHV5-51*03  182  .C.....C..........A.........C....C............C..C...........G...............A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  L  C  Y  C  A  R  A  L  G  D  L  S  S  L  V  G  F  D  Y  W  G  Q  G  T  L  V  T  F  
                    Query_5072   273  CCGCCTTATGTTATTGTGCGAGGGCTTTGGGGGATTTATCGTCATTAGTGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCTTCT  362
V  89.7% (262/292)  IGHV5-51*03  272  .....A.G.A...C........--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  94.1% (16/17)    IGHD3-16*02  15   -------------------------.........G.......------------------------------------------------  31
J  97.7% (42/43)    IGHJ4*02     5    ----------------------------------------------------..................................G...  42

                                           
                                      S  S 
                    Query_5072   363  CCTCA  367
J  97.7% (42/43)    IGHJ4*02     43   .....  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_29651

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            394     7e-112
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_5073  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.4% (271/290)  IGHV1-8*02  6    ..................G..........................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_5073  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.4% (271/290)  IGHV1-8*02  96   ........A.........................................................C.......................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_5073  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.4% (271/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5073  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.4% (271/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_306679

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           374     8e-106
IGHD6-19*01                                                                                           18.0    0.65  
IGHJ5*01                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD6-19*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCG	AGCAGTGTCTGG	GACATAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGCAGTGTCTGGGACATATTGGTTCGACTCC	ARDRAVSGTYWFDS	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	265	26	0	91.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  R  G  T  F  S  A  F
                    Query_5074   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTCGAGGCACCTTCAGCGCCTT  90
V  91.1% (265/291)  IGHV1-69*06  6    ..................G...................................................G..............AG..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  L  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  N  Y  P  Q
                    Query_5074   91   TGGTCTCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGATCATCCCGATATTTGGGACAACAAACTACCCACA  180
V  91.1% (265/291)  IGHV1-69*06  96   ..C.A...............................G..........................T..C.....T...G........G....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  S  A  D  K  S  T  S  T  V  Y  M  E  V  T  S  L  K  S  D  D  T  A
                    Query_5074   181  GAAATTCCAGGACAGAGTCACGATTAGCGCGGACAAGTCCACGAGCACAGTGTACATGGAGGTGACCAGCCTGAAATCTGACGACACGGC  270
V  91.1% (265/291)  IGHV1-69*06  186  ...G.......G..............C.........A.............CC.........C...G........G......G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  D  R  A  V  S  G  T  Y  W  F  D  S  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_5074   271  CATATATTACTGCGCGAGAGATCGAGCAGTGTCTGGGACATATTGGTTCGACTCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  359
V  91.1% (265/291)  IGHV1-69*06  276  .G.G........T........--------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD6-19*01  7    ------------------------.......G....-----------------------------------------------------  18
J  95.7% (44/46)    IGHJ5*01     6    -------------------------------------------....................A.............C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_93887

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           286     1e-79
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ1*01                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD4-17*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGA	TACGGTGA	GGGGACTTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGATACGGTGAGGGGACTTAT	ARDRYGEGTY	234	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	17	7	0	70.8
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	119	21	19	2	0	90.5
FR3-IMGT	120	233	114	102	12	0	89.5
CDR3-IMGT (germline)	234	241	8	8	0	0	100
Total	N/A	N/A	229	206	23	0	90


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  L  V  A  S  S  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  
                    Query_5075   13   GTGCAGCTTCTGGCCTCGTGGCCAGTAGTAACTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTT  102
V  90.0% (206/229)  IGHV3-53*01  65   .......C.....GT..ACC.T......C..........G..................................................  154
                                         A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  

                                      --CDR2-IMGT-----><----------------------------------------------------FR3-IMGT------------
                                      Y  H  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  
                    Query_5075   103  ATCACGGTGGTAGCACATATTACGCAGACTCCGTAAAGGGCCGATTCACCATCTCCAGAGACGACTCTAAGAATACACTGTATCTTCAAA  192
V  90.0% (206/229)  IGHV3-53*01  155  ..AG...............C..............G...........................A.T..C.....C..G.............  244
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  

                                      ----------------------------------------><----------CDR3-IMGT--------->                   
                                      M  N  N  L  K  V  D  D  T  A  V  Y  Y  C  A  R  D  R  Y  G  E  G  T  Y  W  G  K  G  T  L  
                    Query_5075   193  TGAACAACCTGAAAGTCGACGACACGGCCGTGTATTATTGTGCGAGAGATCGATACGGTGAGGGGACTTATTGGGGCAAGGGCACCCTGG  282
V  90.0% (206/229)  IGHV3-53*01  245  ......G.....G..C...G.................C...........-----------------------------------------  293
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                            
D  100.0% (8/8)     IGHD4-17*01  5    -----------------------------------------------------........-----------------------------  12
J  94.1% (32/34)    IGHJ1*01     19   -----------------------------------------------------------------------......C............  37

                                                     
                                      V  T  V  S  S  
                    Query_5075   283  TCACCGTCTCGTCAG  297
J  94.1% (32/34)    IGHJ1*01     38   ..........C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_40899

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         399     3e-113
IGHD6-13*01                                                                                           14.1    9.5   
IGHJ5*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCATGACGCCCTG	GCAGTAGCTG	N/A	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATGACGCCCTGGCAGTAGCTGGGTTCGACCCC	ARHDALAVAGFDP	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	71	0	0	100
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	105	9	0	92.1
CDR3-IMGT (germline)	291	295	5	5	0	0	100
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                        <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                           Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  P  T  
                    Query_5076     7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTCCCACCT  96
V  94.1% (272/289)  IGHV5-10-1*01  5    ...................................................................................A...G..  94
                                           Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  

                                        ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                        Y  W  V  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  K  V  D  P  S  D  S  Y  I  K  Y  S  
                    Query_5076     97   ACTGGGTCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAAAGTTGACCCTAGTGACTCTTATATCAAGTACAGTC  186
V  94.1% (272/289)  IGHV5-10-1*01  95   .....A................................................GGA....T................C...C.....C.  184
                                        Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  

                                        -------------------------------------------FR3-IMGT---------------------------------------
                                        P  S  F  Q  G  H  V  T  I  V  V  D  K  S  I  N  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_5076     187  CGTCTTTCCAAGGCCACGTCACCATCGTAGTTGACAAGTCCATCAACACTGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCG  276
V  94.1% (272/289)  IGHV5-10-1*01  185  ....C.....................TC..C..............G........A...................................  274
                                        P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                        -------------><--------------CDR3-IMGT-------------->                                  
                                        A  M  Y  F  C  A  R  H  D  A  L  A  V  A  G  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5076     277  CCATGTATTTCTGTGCGAGGCATGACGCCCTGGCAGTAGCTGGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  363
V  94.1% (272/289)  IGHV5-10-1*01  275  .........A.........--------------------------------------------------------------------  293
                                        A  M  Y  Y  C  A                                                                       
D  90.0% (9/10)     IGHD6-13*01    8    --------------------------------....C.....---------------------------------------------  17
J  100.0% (45/45)   IGHJ5*02       7    ------------------------------------------.............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_237889

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            324     8e-91
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGATGAA	TCGGGGAG	GCCC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGATGAATCGGGGAGGCCCCTATTATTACTACGGCATGGACGTC	ARVMNRGGPYYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  G  S  G  F  T  F  R  D  Y  T  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5077   1    GGTCCCTGAGACTCTCCTGTACAGGTTCTGGATTCACCTTTCGTGATTATACTATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-7*03   47   ....................G...CC...............A..AGC...TGG....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  K  H  Y  V  D  S  V  Q  G  R  F  T  V  S  R  D  N  A  
                    Query_5077   91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGAGAAACACTATGTGGACTCTGTGCAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  91.6% (228/249)  IGHV3-7*03   137  ....................C.................T.................A..............A..................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  I  L  Q  M  S  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  V  M  N  R  G  G  P  
                    Query_5077   181  AGAATTCACTGATTCTGCAAATGAGTAGCCTGAGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGTGATGAATCGGGGAGGCCCCT  270
V  91.6% (228/249)  IGHV3-7*03   227  ....C......TA...........AC..........C................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-10*01  14   ----------------------------------------------------------------------------........------  21
J  94.8% (55/58)    IGHJ6*02     5    ----------------------------------------------------------------------------------------..  6

                                      GT-------------------->                                 
                                      Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5077   271  ATTATTACTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  94.8% (55/58)    IGHJ6*02     7    .C..C........T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_237888

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*04                                                                                           296     2e-82
IGHD2-21*01                                                                                           10.3    124  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*04	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATAAAGACCCCGGAGGGCGC	CTATT	TCTCG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATAAAGACCCCGGAGGGCGCCTATTTCTCGTACTACGGTATGGACGTC	ARIKTPEGAYFSYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	218	29	0	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  I  A  S  G  F  T  F  S  D  F  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5078   1    GGTCCCTGAGACTCTCCTGTATAGCCTCTGGATTCACCTTCAGTGATTTTACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGC  90
V  88.3% (218/247)  IGHV3-21*04  47   ....................GC......................AGC.A..G.................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  S  S  G  T  Y  T  Y  Y  A  D  S  L  Q  G  R  F  T  I  A  R  D  N  A  
                    Query_5078   91   AGTGGGTGTCATCCATTAGTAGTAGTGGGACTTACACATACTACGCAGACTCACTTCAGGGCCGATTCACCATCGCCAGAGACAACGCCA  180
V  88.3% (218/247)  IGHV3-21*04  137  .......C..................A.T.G.....T................G.GA.................T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  R  S  L  Y  L  Q  V  N  S  L  R  T  E  D  T  G  I  Y  Y  C  A  R  I  K  T  P  E  G  A  
                    Query_5078   181  AGAGGTCTCTGTATCTCCAAGTGAACAGCCTGAGAACCGAGGACACCGGCATATATTATTGTGCGAGGATAAAGACCCCGGAGGGCGCCT  270
V  88.3% (218/247)  IGHV3-21*04  227  ...AC..A........G...A..............G..........G.C.G.G.....C........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  22   ----------------------------------------------------------------------------------------..  23

                                      IMGT--------------------->                              
                                      Y  F  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_5078   271  ATTTCTCGTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  326
D  100.0% (5/5)     IGHD2-21*01  24   ...-----------------------------------------------------  26
J  100.0% (48/48)   IGHJ6*02     12   --------................................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_40891

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            378     3e-107
IGHD1-26*01                                                                                           12.2    35    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y
                    Query_5079   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACCACTTA  90
V  91.7% (266/290)  IGHV1-8*01   6    ..................G...............................................T........C..........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F  A  Q
                    Query_5079   91   TGATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTTGCACA  180
V  91.7% (266/290)  IGHV1-8*01   96   .................................A..G..............A..............C.G...T..........A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D  T  A
                    Query_5079   181  GAGATTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGACACGGC  270
V  91.7% (266/290)  IGHV1-8*01   186  ..AG...C............................C.....A.................GC............G..C..AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_5079   271  CATATATTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  352
V  91.7% (266/290)  IGHV1-8*01   276  .G.G................--------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   -----------------------------...G.....--------------------------------------------  18
J  100.0% (40/40)   IGHJ5*02     11   ------------------------------------------........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_40890

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTTCG	GCAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTCGGCAGCAGCTGACTGACTAC	ARDFRQQLTDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5080   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  G  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  A  
                    Query_5080   91   AGTGGGTCTCATCCATTAGTAGTAGTGGTACTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCATCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  ..........................A...G......................................C....................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  R  Q  Q  L  T  
                    Query_5080   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCTGTGTATTACTGTGCGAGAGATTTTCGGCAGCAGCTGACTG  270
V  98.4% (246/250)  IGHV3-21*01  227  ........................................G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD6-13*01  8    ----------------------------------------------------------------------------..........----  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5080   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (41/41)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_40893

Length=426
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           336     2e-94
IGHD6-13*01                                                                                           23.8    0.013
IGHJ6*02                                                                                              79.5    5e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-13*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCCATCCCGAGGGGGA	AGCAGCAGCTGATAC	CGAAAGGGGC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCCATCCCGAGGGGGAAGCAGCAGCTGATACCGAAAGGGGCACTTCTACGCAATGGATGTC	ASPSRGGSSS*YRKGHFYAMDV	305	370	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	115	45	20	4	21	44.4
FR2-IMGT	116	166	51	48	3	0	94.1
CDR2-IMGT	167	190	24	16	8	0	66.7
FR3-IMGT	191	304	114	107	7	0	93.9
CDR3-IMGT (germline)	305	309	5	5	0	0	100
Total	N/A	N/A	309	264	24	21	85.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-----------------CD
                                        Q  L  V  Q  S  G  A  E  V  T  K  P  G  S  S  V  K  I  S  C  K  A  S  G  G  T  F  R  S  S
                    Query_5081   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGACGAAGCCTGGGTCCTCGGTGAAGATCTCCTGCAAGGCTTCTGGAGGCACCTTCAGGTCTTC  90
V  85.4% (264/309)  IGHV1-69*01  6    .............................A......................G...............................C-----  90
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S      

                                      R1-IMGT-----------------><--------------------FR2-IMGT---------------------><-------CDR2-I
                                        G  Y  T  F  G  T  Y  A  M  T  W  V  R  Q  A  P  G  Q  G  L  E  W  I  G  G  I  I  A  I  A
                    Query_5081   91   TGGATACACCTTCGGAACTTATGCCATGACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATAGGAGGGATCATCGCCATCGC  180
V  85.4% (264/309)  IGHV1-69*01  91   ----------------.GC.....T..C.G.......................................G............C.T...TT  164
                                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F

                                      MGT------><----------------------------------------------------FR3-IMGT-------------------
                                        G  V  I  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  A  N  T  A  Y  L  E  V  S  S
                    Query_5081   181  TGGTGTAATAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCGGCGAATACAGCCTACTTGGAGGTGAGCAG  270
V  85.4% (264/309)  IGHV1-69*01  165  ....AC.GC...................................................CA...GC.........A.....C.......  254
                                        G  T  A  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S

                                      ---------------------------------><----------------------------CDR3-IMGT------------------
                                        L  R  S  E  D  T  A  V  Y  Y  C  A  S  P  S  R  G  G  S  S  S  *  Y  R  K  G  H  F  Y  A
                    Query_5081   271  CCTGAGATCTGAGGACACGGCCGTCTATTACTGTGCGAGCCCATCCCGAGGGGGAAGCAGCAGCTGATACCGAAAGGGGCACTTCTACGC  360
V  85.4% (264/309)  IGHV1-69*01  255  ........................G..............---------------------------------------------------  293
                                        L  R  S  E  D  T  A  V  Y  Y  C  A                                                      
D  93.3% (14/15)    IGHD6-13*01  7    -------------------------------------------------------...........G...--------------------  21
J  92.5% (49/53)    IGHJ6*02     10   --------------------------------------------------------------------------------...A.....G  19

                                      --------->                                 
                                        M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5081   361  AATGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  403
J  92.5% (49/53)    IGHJ6*02     20   T.....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41866416


Query= Query_40892

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           304     1e-84
IGHD3-10*01                                                                                           41.1    7e-08
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAC	TATTATTATGGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTATTATTATGGTTCGGGGAGTTATTTTGACTTC	ARGHYYYGSGSYFDF	250	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	33	33	27	0	6	81.8
CDR1-IMGT	34	63	30	26	4	0	86.7
FR2-IMGT	64	114	51	43	8	0	84.3
CDR2-IMGT	115	135	21	21	0	0	100
FR3-IMGT	136	249	114	103	11	0	90.4
CDR3-IMGT (germline)	250	256	7	7	0	0	100
Total	N/A	N/A	256	227	23	6	88.7


Alignments

                                      <-----------FR1-IMGT------------><----------CDR1-IMGT---------><--------------------FR2-IM
                                       T  L  S  L  T  C  T  V  T  F  S  R  G  S  I  S  S  G  G  S  Y  R  D  W  I  R  Q  H  P  G 
                    Query_5082   1    ACCCTGTCCCTCACCTGCACTGTCACTTTCTCTCGTGGCTCCATTAGCAGTGGCGGTTCCTACCGGGACTGGATCCGCCAGCACCCCGGG  90
V  88.7% (227/256)  IGHV4-31*03  49   ........................------...G..........C........T....A....T..AG..................A...  132
                                       T  L  S  L  T  C  T  V        S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  G  P  G  W  I  G  P  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  V  D 
                    Query_5082   91   AAGGGCCCGGGGTGGATTGGGCCCATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCCGGAGTCGACTTACCATATCAGTGGAC  180
V  88.7% (227/256)  IGHV4-31*03  133  .......T..A..........TA........................................AA.......G.............A...  222
                                       K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-----------------CDR
                                       T  S  K  N  Q  L  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  Y  Y  Y 
                    Query_5082   181  ACGTCTAAGAATCAATTGTCCCTGAGGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTATTGTGCGAGAGGCCACTATTATTAT  270
V  88.7% (227/256)  IGHV4-31*03  223  ...........C..G..C.......A......C..........................G.....C..........--------------  298
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  95.8% (23/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------------.....C...  10

                                      3-IMGT----------------->                                  
                                       G  S  G  S  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5082   271  GGTTCGGGGAGTTATTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.8% (23/24)    IGHD3-10*01  11   ...............-------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_237883

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           307     1e-85
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GGGGA	TACCAG	GCAGGTGTG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGGGGATACCAGGCAGGTGTGGACTAC	VGGGYQAGVDY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	99	15	0	86.8
CDR3-IMGT (germline)	240	246	7	5	2	0	71.4
Total	N/A	N/A	246	221	25	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  F  M  T  W  V  R  Q  P  P  G  K  G  L  
                    Query_5083   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACAGTCAGTAGCAACTTCATGACCTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  89.8% (221/246)  IGHV3-53*01  47   ...............................G.....C.............A.....G.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  V  Y  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  T  S  K  
                    Query_5083   91   AGTGGGTCTCAGTTGTTTATGGCGGCGGTAGCACATATTACGCAGACTCCGTGAAGGGACGATTCACCGTCTCGAGAGACACCTCCAAGG  180
V  89.8% (221/246)  IGHV3-53*01  137  ..............A.....A....T...........C....................C.........A....C.......AT......A  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      D  T  V  Y  L  Q  L  N  R  L  R  V  E  D  T  A  V  Y  Y  C  V  G  G  G  Y  Q  A  G  V  D  
                    Query_5083   181  ACACGGTTTATCTTCAATTGAATAGACTGAGAGTCGAAGACACGGCCGTATATTACTGTGTGGGAGGGGGATACCAGGCAGGTGTGGACT  270
V  89.8% (221/246)  IGHV3-53*01  227  .....C.G.........A....C..C.......C...G...........G..........C.A...------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (6/6)     IGHD2-2*01   16   -----------------------------------------------------------------------......-------------  21
J  100.0% (39/39)   IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                 
                                      Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_5083   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  305
J  100.0% (39/39)   IGHJ4*02     13   ...................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_237882

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           353     9e-100
IGHD3-16*01                                                                                           10.3    114   
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	A	TTGGG	TCTGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGGGTCTGCGTTTGACCAC	ARIGSAFDH	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5084   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTAG  90
V  95.6% (237/248)  IGHV3-48*03  47   ........................................C...............................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  S  G  S  T  R  Y  T  A  D  S  V  K  G  R  F  T  T  S  R  D  N  A  
                    Query_5084   91   AGTGGGTTTCATACATTAGTACCAGTGGTTCTACCAGATACACCGCAGACTCTGTGAAGGGCCGATTCACCACCTCCAGAGACAACGCCA  180
V  95.6% (237/248)  IGHV3-48*03  137  .....................GT......AG.....T....TA.............................T.................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  I  G  S  A  F  D  H  
                    Query_5084   181  AGAACTCACTGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAATTGGGTCTGCGTTTGACCACT  270
V  95.6% (237/248)  IGHV3-48*03  227  ...................A................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-16*01  16   ---------------------------------------------------------------------.....----------------  20
J  97.7% (42/43)    IGHJ4*02     6    --------------------------------------------------------------------------------......T...  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5084   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  97.7% (42/43)    IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_40897

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q 
                    Query_5085   1    ACCCTGTCCCTCACCTGCACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAA  90
V  90.6% (222/245)  IGHV4-59*01  49   ....................T..........................C........C............C.................G.G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_5085   91   TGGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  ...A....G.....C...T....T....G......C..............C...........C.C.........A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  H  Y  C  A  R  D  L  G  F  N  D  Y  G  E 
                    Query_5085   181  CAGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGCATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAG  270
V  90.6% (222/245)  IGHV4-59*01  229  ...T.........AG..G.G............................T................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  1    -----------------------------------------------------------------------------............-  12

                                      -------------->                                  
                                       D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_5085   271  GATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  319
J  92.5% (37/40)    IGHJ4*02     9    ---------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_237880

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           347     7e-98
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TC	CGGTGACTAC	GGAAACAGTTTGCCGTC	TGACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCGGTGACTACGGAAACAGTTTGCCGTCTGACAAC	ARSGDYGNSLPSDN	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  R  A  P  G  K  G  L  
                    Query_5086   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCAGGATTCACCTTCAGTAGCTACGGCATGCACTGGGTCCGCCGGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-33*01  47   ............................T....................T...................A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  Q  D  S  V  R  G  R  F  I  I  S  R  D  N  S  
                    Query_5086   91   AGTGGGTGGCAGTTATTTGGTATGATGGAAGTAATAAATACTACCAAGACTCCGTGAGGGGTCGATTCATCATCTCCAGAGACAATTCCA  180
V  94.8% (235/248)  IGHV3-33*01  137  ................A..........................TGC...........A...C.......C....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  G  D  Y  G  N  S  
                    Query_5086   181  GGAACACACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGATCCGGTGACTACGGAAACAGTT  270
V  94.8% (235/248)  IGHV3-33*01  227  A......G....A.......................................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD4-17*01  7    ----------------------------------------------------------------------..........----------  16

                                      ------------->                                 
                                      L  P  S  D  N  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_5086   271  TGCCGTCTGACAACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCA  317
J  95.0% (38/40)    IGHJ4*02     8    -------....T.............A.....................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_30799

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            324     8e-91
IGHD2-15*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACA	GTGGTAG	GAGGAATCAGGCCCTCGCAAC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACAGTGGTAGGAGGAATCAGGCCCTCGCAACTTGACTAC	ARTVVGGIRPSQLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  S  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5087   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTCTTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (227/247)  IGHV3-7*03   47   .............................................G..A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  E  A  G  N  E  R  N  F  V  D  S  M  K  G  R  L  T  I  S  R  D  N  A  
                    Query_5087   91   AGTGGGTGGCCAACATAAACGAGGCTGGAAATGAGAGAAACTTTGTTGACTCTATGAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  91.9% (227/247)  IGHV3-7*03   137  ...................GC.A.A.....G.....A.T...A...G......G...........T........................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  K  S  L  Y  L  Q  M  H  S  L  R  G  E  D  T  G  V  Y  Y  C  A  R  T  V  V  G  G  I  R  
                    Query_5087   181  AGAAGTCACTGTATCTGCAAATGCACAGCCTGAGAGGCGAAGACACGGGCGTTTATTACTGTGCGAGGACAGTGGTAGGAGGAATCAGGC  270
V  91.9% (227/247)  IGHV3-7*03   227  ....C..................A............C...G.......C...G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-15*01  15   -----------------------------------------------------------------------.......------------  21

                                      ---------------->                                  
                                      P  S  Q  L  D  Y  W  G  Q  G  T  L  V  T  V  S  T  
                    Query_5087   271  CCTCGCAACTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCACAG  321
J  97.6% (41/42)    IGHJ4*02     7    ---------......................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_238968

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-10*01                                                                                           10.3    117  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACA	GGGGA	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACAGGGGATACTACGGTATGGACGTC	ARDDRGYYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_5088   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTATTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   .....................................................C.A.....G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  H  Y  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S 
                    Query_5088   91   CTGGAGTGGATTGGGAACATCCATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ...............T.....T...................C.................G........T.....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  E  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  D  D  R  G  Y  Y  G 
                    Query_5088   181  AAGAACCAGTTCTCCCTGGAGCTGACCTCTATGACAGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGATGACAGGGGATACTACGGT  270
V  94.4% (237/251)  IGHV4-31*03  229  ..................A......G....G....T.................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------------.....---------  20
J  96.0% (48/50)    IGHJ6*02     12   ---------------------------------------------------------------------------------.........  20

                                      -------->                                
                                       M  D  V  W  G  Q  G  I  T  V  T  V  S  S
                    Query_5088   271  ATGGACGTCTGGGGCCAAGGGATTACGGTCACCGTCTCCTC  311
J  96.0% (48/50)    IGHJ6*02     21   ......................CC.................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_246075

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           402     3e-114
IGHD1-26*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGG	GTGGGAGCTAC	GAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGTGGGAGCTACGAAACTTTTACTAC	ARGGWELRNFYY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_5089   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCCACTTA  90
V  94.5% (273/289)  IGHV5-51*01  6    ..................................................................................A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  P
                    Query_5089   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGTATCATCGATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  94.5% (273/289)  IGHV5-51*01  96   C.......G..........................................G......T.................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  F  L  Q  W  S  S  L  R  A  S  V  S  A
                    Query_5089   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTTCCTGCAGTGGAGCAGCCTGAGGGCCTCGGTCTCCGC  270
V  94.5% (273/289)  IGHV5-51*01  186  .......C....................................G........A....................A........A.A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  C  W  A  R  G  G  W  E  L  R  N  F  Y  Y  G  G  R  G  S  L  V  S  V  S  S  
                    Query_5089   271  CATGTATTGCTGGGCGAGAGGGGGGTGGGAGCTACGAAACTTTTACTACGGGGGCCGGGGATCCCTGGTCTCCGTCTCCTCAG  353
V  94.5% (273/289)  IGHV5-51*01  276  ........A...T......----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (11/11)   IGHD1-26*01  7    ------------------------...........------------------------------------------------  17
J  88.9% (40/45)    IGHJ4*02     4    --------------------------------------.....G.....T......A....A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_238961

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           434     4e-124
IGHD1-26*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCG	AGTGGGAGCTACT	TGGGGCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTAC	ARDLEWELLGAFDY	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	74	1	0	98.7
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	287	9	0	97


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_5090   3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  92
V  97.0% (287/296)  IGHV1-69*06  1    .......................G..................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  S  F  G  T  A  H  Y 
                    Query_5090   93   AGATATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTAGCTTTGGAACAGCACACTAC  182
V  97.0% (287/296)  IGHV1-69*06  91   ..C...................................................................T......T......A.....  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  R  F  Q  G  R  V  T  I  T  A  D  R  S  T  S  T  A  Y  M  E  L  S  S  L  S  S  E  D 
                    Query_5090   183  GCACAGAGATTCCAGGGCAGAGTCACGATTACCGCGGACAGATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGCTCTGAGGAC  272
V  97.0% (287/296)  IGHV1-69*06  181  .......AG...............................A.......................................A.........  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  D  L  E  W  E  L  L  G  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_5090   273  ACGGCCGTGTATTACTGTGCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  362
V  97.0% (287/296)  IGHV1-69*06  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (13/13)   IGHD1-26*01  6    -------------------------------.............----------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------------------------.......................................  44

                                          
                                       S  
                    Query_5090   363  TCAG  366
J  100.0% (43/43)   IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_30790

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           397     8e-113
IGHD2-21*02                                                                                           16.1    2.5   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TTTG	GGTGATGACTG	GGATCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTTTGGGTGATGACTGGGATCAATACTACTTTGACTAC	ASLGDDWDQYYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	271	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  T  G  E  S  L  K  I  S  C  R  C  S  G  Y  R  F  T  N  Y
                    Query_5091   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGACCGGGGAGTCTCTGAAGATCTCCTGTAGGTGTTCTGGATACAGGTTTACCAATTA  90
V  94.1% (271/288)  IGHV5-51*01  6    ..................................C...........................A.G.............C.......GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  M  G  M  M  N  P  G  D  S  D  T  R  Y  S  P
                    Query_5091   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACATGGGAATGATGAATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  94.1% (271/288)  IGHV5-51*01  96   ........G...................................GG.....G..C..CT...............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  G  Q  V  T  I  S  A  D  E  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_5091   181  GCCCTTCCAAGGCCAGGTCACCATCTCAGCCGACGAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  94.1% (271/288)  IGHV5-51*01  186  .T................................A..........C...........................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  S  L  G  D  D  W  D  Q  Y  Y  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_5091   271  CATGTATTACTGTGCGAGTTTGGGTGATGACTGGGATCAATACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  359
V  94.1% (271/288)  IGHV5-51*01  276  ..................-----------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                          
D  90.9% (10/11)    IGHD2-21*02  11   ----------------------....G......--------------------------------------------------------  21
J  97.9% (47/48)    IGHJ4*02     1    -----------------------------------------...................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_30793

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           388     5e-110
IGHD3-3*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	GGAGAGTCTG	CGATTTCTGGAGTGGTTAT	CCCCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTAC	AREESLRFLEWLSPDY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  L  T  R  Y 
                    Query_5092   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTAAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTGACCAGATAT  91
V  92.8% (269/290)  IGHV1-18*01  7    ...............................................G.................T..............T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  M  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  S  N  I  N  Y  A  Q 
                    Query_5092   92   AGTATGTCTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATAGCAACATAAATTATGCACAG  181
V  92.8% (269/290)  IGHV1-18*01  97   G....CAGC....................................................C.......G.T....C...C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  L  G  R  V  T  M  T  I  D  T  S  A  N  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_5092   182  AAACTCCTGGGCAGAGTCACCATGACCATAGACACATCCGCGAACACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.8% (269/290)  IGHV1-18*01  187  ..G....A....................C..........A...G..............................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                             
                                       V  Y  Y  C  A  R  E  E  S  L  R  F  L  E  W  L  S  P  D  Y  W  G  Q  G  T  L  V  I  V  S
                    Query_5092   272  GTGTATTATTGTGCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTC  360
V  92.8% (269/290)  IGHV1-18*01  277  ........C........A..---------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-3*01   7    ------------------------------......T............----------------------------------------  25
J  97.1% (34/35)    IGHJ4*02     9    ------------------------------------------------------............................C......  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_30795

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           285     4e-79
IGHD4-17*01                                                                                           12.2    32   
IGHJ2*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAATAGTTTTTATCCCCCGTCG	GACTAC	TT	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATAATAGTTTTTATCCCCCGTCGGACTACTTCTTCGATCTC	ARDNSFYPPSDYFFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	15	9	0	62.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	216	34	0	86.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  D  F  K  K  F  N  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5093   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCGACTTCAAGAAGTTCAACATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  86.4% (216/250)  IGHV3-21*01  47   ....................G..............AC.....GT.GC.AT.G...........................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  G  R  S  N  D  I  H  Y  G  A  S  V  K  G  R  F  S  I  S  R  D  N  A  
                    Query_5093   91   AGTGGGTCTCTTCAATTAGGGGTCGGAGTAATGACATACATTATGGAGCCTCAGTGAAGGGCCGATTCTCCATCTCCAGAGACAACGCCA  180
V  86.4% (216/250)  IGHV3-21*01  137  ..........A..C.....TA..A.T....G.T.....T.C..C.C..A...................A.....................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  N  S  L  Y  L  H  M  N  S  L  G  A  E  D  T  A  I  Y  F  C  A  R  D  N  S  F  Y  P  P  
                    Query_5093   181  ACAACTCCCTGTATCTCCACATGAACAGCCTGGGAGCCGAGGACACGGCTATCTATTTCTGTGCCAGAGATAATAGTTTTTATCCCCCGT  270
V  86.4% (216/250)  IGHV3-21*01  227  .G.....A........G..A............A.................G.G....A......G.....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      T------------------>                                  
                                      S  D  Y  F  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_5093   271  CGGACTACTTCTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  100.0% (6/6)     IGHD4-17*01  2    --......----------------------------------------------  7
J  100.0% (44/44)   IGHJ2*01     10   ----------............................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_238964

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     4e-93
IGHD2-2*02                                                                                            18.0    0.63 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	TCAAGCAGTCGGGATTGTCGAAGTAATGC	CTGCTATAC	GGAATCAGATCTTTACCTCAAT	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCAAGCAGTCGGGATTGTCGAAGTAATGCCTGCTATACGGAATCAGATCTTTACCTCAATTACGATATGGGCGTC	ASSSRDCRSNACYTESDLYLNYDMGV	238	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	226	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  T  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_5094   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGGACTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  94.2% (226/240)  IGHV4-59*01  49   ...............................G.........T.G.........................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  P  A  D  T  S  K  N 
                    Query_5094   91   TGGATTGGGTATATCTATTACAGTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATACCGGCAGACACGTCCAAGAAC  180
V  94.2% (226/240)  IGHV4-59*01  139  ............................G........................................T.A.T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       H  F  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  S  S  R  D  C  R  S  N  A 
                    Query_5094   181  CACTTCTCCCTGAAGGTGACCTCTGTGACCGCTGCGGACACGGCCGTATACTACTGCGCGTCAAGCAGTCGGGATTGTCGAAGTAATGCC  270
V  94.2% (226/240)  IGHV4-59*01  229  ..G............C...G...........................G..T.....T...------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD2-2*02   22   -----------------------------------------------------------------------------------------.  22

                                      --CDR3-IMGT--------------------------------->                                 
                                       C  Y  T  E  S  D  L  Y  L  N  Y  D  M  G  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_5094   271  TGCTATACGGAATCAGATCTTTACCTCAATTACGATATGGGCGTCTGGGGCCAAGGGACCACGGTCTCCGTCTCCTCA  348
D  100.0% (9/9)     IGHD2-2*02   23   ........----------------------------------------------------------------------  30
J  93.8% (45/48)    IGHJ6*02     15   ------------------------------....G.....A.........................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_30797

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           364     6e-103
IGHD1-26*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCGAGG	GGTATGGTGGAATCCACTAC	ATTTCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCGAGGGGTATGGTGGAATCCACTACATTTCATACTACTTTGACTAC	ARGEGYGGIHYISYYFDY	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	260	27	0	90.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  P  E  V  K  E  P  G  A  S  V  K  V  S  C  K  A  S  G  F  S  L  T  N  Y 
                    Query_5095   2    CAGCTGGTGCAGTCTGGACCTGAGGTGAAGGAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTTCAGCTTGACCAACTAT  91
V  90.6% (260/287)  IGHV1-18*01  7    ..................G...........A..........................................A..C...T....G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  L  T  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  S  Y  D  G  N  T  D  Y  A  Q 
                    Query_5095   92   GGTCTCACCTGGGTGCGTCAGGCCCCTGGACAAGGGCTTGAGTGGCTGGGGTGGATCAGCTCTTATGACGGTAACACAGACTATGCACAG  181
V  90.6% (260/287)  IGHV1-18*01  97   ...A...G.........A...........................A....A.........G....CA.T.........A...........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  I  M  T  R  D  I  S  T  N  T  A  Y  M  E  L  R  S  L  E  S  D  D  T  A 
                    Query_5095   182  AAACTCCAGGGCAGAGTTATTATGACCAGAGACATATCCACGAACACAGCCTACATGGAACTGAGGAGCCTGGAATCTGACGACACGGCC  271
V  90.6% (260/287)  IGHV1-18*01  187  ..G..............C.CC.......C.....C........G...............G............AG................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  G  E  G  Y  G  G  I  H  Y  I  S  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T 
                    Query_5095   272  GTATATTACTGTGCGAGGGGCGAGGGGTATGGTGGAATCCACTACATTTCATACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACC  361
V  90.6% (260/287)  IGHV1-18*01  277  ..G..............-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  80.0% (16/20)    IGHD1-26*01  1    -------------------------.....A....G.G.T.....---------------------------------------------  20
J  100.0% (48/48)   IGHJ4*02     1    ----------------------------------------------------......................................  38

                                                
                                       V  S  S  
                    Query_5095   362  GTCTCCTCAG  371
J  100.0% (48/48)   IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_238966

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           330     1e-92
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGCCGG	TGGTTCGGGGAGTTATTA	CAGAGGA	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGCCGGTGGTTCGGGGAGTTATTACAGAGGATTCGACCCC	ARDAGGSGSYYRGFDP	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	231	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5096   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGTTCCATCAGCAGCGGTTCTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  92.0% (231/251)  IGHV4-31*03  49   ................................C...........T...GG............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  P  S  Y  Y  N  P  S  L  R  S  R  L  A  I  S  V  D  T  S 
                    Query_5096   91   CTGGAGTGGATTGGGTACATCCATCACAGTGGGCCCAGCTACTACAACCCGTCCCTCAGGAGTCGACTTGCGATATCAGTAGACACGTCT  180
V  92.0% (231/251)  IGHV4-31*03  139  .....................T..T........AG..C....................A.......G..A.C..................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  E  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  A  G  G  S  G  S 
                    Query_5096   181  AAGAATGAACTCTCCCTGAAGCTGACCTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGAGACGCCGGTGGTTCGGGGAGT  270
V  92.0% (231/251)  IGHV4-31*03  229  .....CC.GT...............G..............................T..............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (18/18)   IGHD3-10*01  10   -----------------------------------------------------------------------------.............  22

                                      GT------------------>                                  
                                       Y  Y  R  G  F  D  P  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_5096   271  TATTACAGAGGATTCGACCCCTGGGGTCAGGGAGTCCTGGTCACCGTCTCCTCAG  325
D  100.0% (18/18)   IGHD3-10*01  23   .....--------------------------------------------------  27
J  93.0% (40/43)    IGHJ5*02     9    ------------..............C......AC....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_55853

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           344     6e-97
IGHD3-10*01                                                                                           12.2    32   
IGHJ6*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGAAA	GGGAGT	GAGA	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAAAGGGAGTGAGATACGACTACTACGATATGGACGTC	ARDRKGVRYDYYDMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  S  Y  D  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5097   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACTTTCAGCAGTTATGACATCAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-48*03  47   ........................C............C.....T........A..G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  S  S  S  G  I  I  V  R  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_5097   91   AGTGGGTTTCATTCATTAGTAGTAGTGGTATTATTGTAAGATACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACGACGCCA  180
V  94.0% (235/250)  IGHV3-48*03  137  ............A.................G..CCA..TAC..........................................A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  K  G  V  R  Y  
                    Query_5097   181  AGAACTCTCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATCGAAAGGGAGTGAGATACG  270
V  94.0% (235/250)  IGHV3-48*03  227  .......A..............................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01  17   ----------------------------------------------------------------------------......--------  22
J  96.5% (55/57)    IGHJ6*02     6    --------------------------------------------------------------------------------------...T  9

                                      T------------------>                                 
                                      D  Y  Y  D  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5097   271  ACTACTACGATATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.5% (55/57)    IGHJ6*02     10   .........G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_131474

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           385     4e-109
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCATGC	ATGGTTCGGGGAG	AAGTACGATGGCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCATGCATGGTTCGGGGAGAAGTACGATGGCTACTACTTTGACTAC	ARDHAWFGEKYDGYYFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	248	2	0	99.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5098   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  99.2% (248/250)  IGHV3-33*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5098   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAAGAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  99.2% (248/250)  IGHV3-33*01  137  ..................................T.......................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  H  A  W  F  G  E  
                    Query_5098   181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGACCATGCATGGTTCGGGGAGA  270
V  99.2% (248/250)  IGHV3-33*01  227  .......G..............................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD3-10*01  9    ----------------------------------------------------------------------------.............-  21

                                      IMGT--------------------->                                  
                                      K  Y  D  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5098   271  AGTACGATGGCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
J  100.0% (48/48)   IGHJ4*02     1    ------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_131477

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            335     4e-94
IGHD6-6*01                                                                                            12.2    32   
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CAAG	TCGTCC	GAAATCGACA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACAAGTCGTCCGAAATCGACAACTTCTACGGTTTGGACGTC	AKDKSSEIDNFYGLDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  F  G  F  T  F  E  D  Y  A  M  H  W  V  R  Q  G  P  G  K  G  L  
                    Query_5099  1    GGTCCCTGAGACTCTCCTGTGCAGCCTTTGGATTCACGTTTGAAGATTATGCCATGCACTGGGTCCGGCAAGGTCCAGGGAAGGGCCTGG  90
V  92.8% (232/250)  IGHV3-9*01  47   ...........................C.........C.....T............................C.................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  R  V  S  G  I  S  W  N  G  Y  T  I  A  Y  A  D  S  V  K  G  R  F  T  L  S  R  D  N  A  
                    Query_5099  91   AACGGGTCTCAGGAATTAGTTGGAATGGTTATACCATAGCCTATGCGGACTCTGTGAAGGGCCGATTCACCCTCTCCAGAGACAACGCCA  180
V  92.8% (232/250)  IGHV3-9*01  137  .GT..........T............A..GG..G.....G...............................A..................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                     R  N  S  L  Y  L  Q  M  N  S  L  G  A  D  D  T  A  F  Y  Y  C  A  K  D  K  S  S  E  I  D  
                    Query_5099  181  GGAACTCCCTGTATCTGCAAATGAACAGTCTGGGAGCTGACGACACGGCCTTCTATTATTGTGCAAAAGACAAGTCGTCCGAAATCGACA  270
V  92.8% (232/250)  IGHV3-9*01  227  A...............................A.......G...........G.....C...........--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD6-6*01  13   --------------------------------------------------------------------------......----------  18

                                     T------------------>                                 
                                     N  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5099  271  ACTTCTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.2% (51/53)    IGHJ6*02    10   ...A.......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_131476

Length=414
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            422     3e-120
IGHD3-22*01                                                                                           19.9    0.19  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTCCTCC	TATTACTTTGATA	CTACTGTGACTGAGCCGAATGAA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCTCCTCCTATTACTTTGATACTACTGTGACTGAGCCGAATGAATACTACCAGTACGGCCTGGACGTC	ASSSYYFDTTVTEPNEYYQYGLDV	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	279	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  F  G  Y  S  F  T  G  Y
                    Query_5100   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTAAAGGTCTCCTGCAAGGCTTTTGGATACAGCTTCACCGGCTA  90
V  96.9% (279/288)  IGHV1-2*04   6    ..................G.............................G...................C........C............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_5100   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGCCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  96.9% (279/288)  IGHV1-2*04   96   ....................................G.....................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  F  I  S  T  A  Y  M  E  L  S  R  L  R  A  D  D  T  A
                    Query_5100   181  GAAATTTCAGGGCTGGGTCACCATGACCAGGGACACGTTCATCAGCACAGCCTACATGGAGCTGAGCAGGCTCAGAGCTGACGACACGGC  270
V  96.9% (279/288)  IGHV1-2*04   186  ...G..................................C.................................G...T.............  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-------------------------------CDR3-IMGT------------------------------>     
                                        V  Y  Y  C  A  S  S  S  Y  Y  F  D  T  T  V  T  E  P  N  E  Y  Y  Q  Y  G  L  D  V  W  G
                    Query_5100   271  CGTGTATTACTGTGCGAGCTCCTCCTATTACTTTGATACTACTGTGACTGAGCCGAATGAATACTACCAGTACGGCCTGGACGTCTGGGG  360
V  96.9% (279/288)  IGHV1-2*04   276  ..................------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  92.3% (12/13)    IGHD3-22*01  2    -------------------------.......A.....----------------------------------------------------  14
J  93.0% (53/57)    IGHJ6*02     6    -------------------------------------------------------------......T.C.....TA.............  34

                                                                  
                                        Q  G  T  T  V  T  V  S  S 
                    Query_5100   361  CCAAGGGACCACGGTCACCGTCTCCTCA  388
J  93.0% (53/57)    IGHJ6*02     35   ............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40604112


Query= Query_131471

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCATGTCCCC	ATTACT	TCCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCATGTCCCCATTACTTCCATTGACTTC	ARAHVPITSIDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  A  I  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5101   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCGCCATCAGTGGTTATTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.8% (224/244)  IGHV4-59*01  49   ...................C.............T........A....C.......G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  N  G  N  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  K 
                    Query_5101   91   TGGATTGGCTATATCTATTACAATGGAAACACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCGAAGAAA  180
V  91.8% (224/244)  IGHV4-59*01  139  ........G.............G...G.G....A..................................A...G..........C.....C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  K  M  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  V  P  I  T  S  I  D 
                    Query_5101   181  CACTTCTCCCTGAAGATGACCTCCATGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCATGTCCCCATTACTTCCATTGAC  270
V  91.8% (224/244)  IGHV4-59*01  229  ..G............C...G...TG......................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-10*01  3    ---------------------------------------------------------------------------......---------  8
J  92.7% (38/41)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                 
                                       F  W  G  L  G  T  L  V  T  V  S  S 
                    Query_5101   271  TTCTGGGGCCTGGGAACCCTGGTCACCGTCTCGTCA  306
J  92.7% (38/41)    IGHJ4*02     12   .A........A.....................C...  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_131470

Length=410
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD1-26*01                                                                                           18.0    0.70  
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCGAGACGTCCCCTTAC	AGTGGGAACTAC	AACAAAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCGAGACGTCCCCTTACAGTGGGAACTACAACAAAGTACTACCACTACGGTATAGACGTC	ARHPRRPLTVGTTTKYYHYGIDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  S  Y
                    Query_5102   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCCGGATACAGCTTTATTAGTTA  90
V  94.5% (275/291)  IGHV5-51*01  6    ....................................C................................T.............CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_5102   91   TTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCCGGTGACTCGGATACCAGATACAACCC  180
V  94.5% (275/291)  IGHV5-51*01  96   C........C.....................................................T........T.............G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  M  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  S  A
                    Query_5102   181  GTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACATGTCCATCAGCACCGCCTACCTCCAGTGGAGCAGCCTGAAGGCCTCGGACAGCGC  270
V  94.5% (275/291)  IGHV5-51*01  186  .......C...................A.C.....A.....................G............................C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        M  Y  Y  C  A  R  H  P  R  R  P  L  T  V  G  T  T  T  K  Y  Y  H  Y  G  I  D  V  W  G  L
                    Query_5102   271  CATGTATTACTGTGCGAGACATCCGAGACGTCCCCTTACAGTGGGAACTACAACAAAGTACTACCACTACGGTATAGACGTCTGGGGCCT  360
V  94.5% (275/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD1-26*01  6    ---------------------------------------.......G....---------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------------------......T..........G.............A  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_5102   361  AGGGACCACGGTCACCGTCTCCTCA  385
J  94.7% (54/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40183344


Query= Query_9477

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           406     1e-115
IGHD3-3*01                                                                                            23.8    0.012 
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCCCTCGTCCCCTATA	TTTTGGAGTGGCTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCCTCGTCCCCTATATTTTGGAGTGGCTATTACTTTGACTAC	ARGPSSPIFWSGYYFDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  D  S  H
                    Query_5103   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCGACAGCCA  90
V  94.8% (275/290)  IGHV1-69*01  6    ..................G...............................................................AG....T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  L  R  Q  A  P  G  Q  G  P  E  W  M  G  G  I  T  P  V  F  G  T  T  N  Y  A  Q
                    Query_5103   91   TGCTATCAGCTGGCTACGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGAGGGATCACCCCTGTCTTTGGTACAACAAACTACGCACA  180
V  94.8% (275/290)  IGHV1-69*01  96   .............G.G......................T....................T....A...........G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  G  S  T  A  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_5103   181  GAGGTTCCAGGGCAGAGTCACGATTACCGCGGACGGATCCACGGCCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  94.8% (275/290)  IGHV1-69*01  186  ..A................................A.......AG.............................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  G  P  S  S  P  I  F  W  S  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_5103   271  CGTCTATTACTGTGCGAGAGGCCCCTCGTCCCCTATATTTTGGAGTGGCTATTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  94.8% (275/290)  IGHV1-69*01  276  ...G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  93.3% (14/15)    IGHD3-3*01   11   -------------------------------------...........T...--------------------------------------  25
J  100.0% (46/46)   IGHJ4*02     3    ----------------------------------------------------......................................  40

                                              
                                        S  S  
                    Query_5103   361  CTCCTCAG  368
J  100.0% (46/46)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_131472

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*09                                                                                           347     8e-98
IGHD2-15*01                                                                                           14.1    9.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*09	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGT	GTGGTAG	GGGCCCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTGGTAGGGGCCCCCCTTGACTAT	ARGGVVGAPLDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	96	18	0	84.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	256	34	0	88.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  Q  P  G  S  S  V  K  V  S  C  K  T  S  G  G  S  F  T  S  Y
                    Query_5104   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGCAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACCTCTGGAGGTAGTTTCACCAGCTA  90
V  88.3% (256/290)  IGHV1-69*09  6    ..................G............A................................G.T........C.CC....G......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  M  P  L  H  G  I  G  N  N  A  E
                    Query_5104   91   TGCGATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGTATCATGCCTCTGCATGGCATAGGAAATAACGCAGA  180
V  88.3% (256/290)  IGHV1-69*09  96   ...T..................................................G.....C...A.C.T...T....C...CT.....C.  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  I  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  L  Q  G  R  V  T  I  T  A  D  A  S  R  R  T  A  Y  M  E  L  R  S  L  R  S  G  D  T  A
                    Query_5104   181  GAAGCTCCAGGGCAGAGTCACGATAACCGCGGACGCATCAAGGAGGACAGCCTACATGGAGTTGAGAAGCCTGAGGTCTGGTGACACGGC  270
V  88.3% (256/290)  IGHV1-69*09  186  ....T...................T.........AA...C.C...C...............C....C........A....AG........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  F  C  A  R  G  G  V  V  G  A  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5104   271  CATGTATTTTTGTGCGAGAGGAGGTGTGGTAGGGGCCCCCCTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  88.3% (256/290)  IGHV1-69*09  276  .G......AC..........---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  100.0% (7/7)     IGHD2-15*01  15   -------------------------.......---------------------------------------------------  21
J  97.6% (41/42)    IGHJ4*02     7    -----------------------------------------.......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_131479

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            311     4e-87
IGHD2-21*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCGACCGAGGA	ACTGCTA	ACCTCTTCGAGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACCGAGGAACTGCTAACCTCTTCGAGAATGCTCTTAGTATC	AADRGTANLFENALSI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  R  G  H  I  T  S  S  H  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_5105   1    ACCCTGTCCCTCACCTGCGCTGTCTCTCGTGGCCACATCACCAGTAGTCACTGGTGGAACTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.9% (221/243)  IGHV4-4*02   49   ...........................G.....TC.....G.......A.........GT..............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  Q  I  Y  Q  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  K  S  R 
                    Query_5105   91   GAGTGGATTGGACAAATTTATCAGAGTGGGAGCACCAATTATAACCCGTCCCTCAGGAGTCGAGTCACCATTTCAGTGGACAAGTCCAGG  180
V  90.9% (221/243)  IGHV4-4*02   139  ...........GG....C.....T..............C..C.............A...............A.....A..........A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  L  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  A  D  R  G  T  A  N  L  F 
                    Query_5105   181  AACCTCTTCTCCCTGACGCTGACCTCTGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGGCCGACCGAGGAACTGCTAACCTCTTC  270
V  90.9% (221/243)  IGHV4-4*02   229  ....AG..........A.....G...........................G............---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD2-21*02  18   ---------------------------------------------------------------------------.......--------  24

                                      ----------------->                                  
                                       E  N  A  L  S  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5105   271  GAGAATGCTCTTAGTATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  93.8% (45/48)    IGHJ3*02     3    ----.....T..GA......................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_118503

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_5106   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_5106   91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y 
                    Query_5106   181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTAC  270
V  91.4% (223/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD2-2*01   8    ---------------------------------------------------------------------........T........----  24
J  88.5% (46/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_5106   271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  318
J  88.5% (46/52)    IGHJ6*02     15   ...GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_80044

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           341     6e-96
IGHD1-26*01                                                                                           14.1    9.1  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACGGGG	TAGTGGG	GCCGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGGGTAGTGGGGCCGGCTGGTTCGACCCC	ARGSGAGWFDP	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	43	8	0	84.3
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	284	251	33	0	88.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  M  F  T  S  Y 
                    Query_5107   2    CAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATGTTTACCAGTTAT  91
V  88.4% (251/284)  IGHV1-18*01  7    ...................C.............................................T..........CC........C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  H  W  A  R  Q  A  P  G  Q  G  L  E  W  L  G  R  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_5107   92   GGTATACATTGGGCGCGACAGGCCCCTGGACAAGGCCTTGAGTGGCTGGGACGGATCAGCGGTTACAACGGGAACACAAACTATGCACAG  181
V  88.4% (251/284)  IGHV1-18*01  97   .....CAGC....T.....................G.........A.....T.........C......T..T..................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  D  R  V  I  L  T  I  D  T  S  T  T  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_5107   182  AACTTGCAGGACAGAGTCATTCTGACCATAGACACGTCCACGACTACAGCCTACATGGAACTGAGGAGTCTCAGATCTGACGACACGGCC  271
V  88.4% (251/284)  IGHV1-18*01  187  ..GC.C....G........CCA......C......A.......GC..............G........C..G..................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  F  C  A  R  G  S  G  A  G  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  T  
                    Query_5107   272  GTCTACTTCTGTGCACGGGGTAGTGGGGCCGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCACAG  350
V  88.4% (251/284)  IGHV1-18*01  277  ..G..T.A......-----------------------------------------------------------------  290
                                       V  Y  Y  C  A                                                                 
D  100.0% (7/7)     IGHD1-26*01  5    --------------------.......----------------------------------------------------  11
J  95.7% (45/47)    IGHJ5*02     5    --------------------------------...................................C.......T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_217517

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-22*01                                                                                           25.7    0.003
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGC	AGTAGTGGTTATT	GG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTCGACCCC	ARGGSSGYWWFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5108   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTATTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*01  49   ...............................G..........A....C.......G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  F  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5108   91   TGGATTGGGTTTATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGGGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.9% (234/244)  IGHV4-59*01  139  ..........A.........C.................................A...................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  S  S  G  Y  W  W  F 
                    Query_5108   181  CAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTC  270
V  95.9% (234/244)  IGHV4-59*01  229  ...............C...G.................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD3-22*01  14   ---------------------------------------------------------------------.............--------  26
J  93.5% (43/46)    IGHJ5*02     6    ------------------------------------------------------------------------------------......  11

                                      ----->                                  
                                       D  P  W  G  Q  A  I  P  V  T  V  S  S  
                    Query_5108   271  GACCCCTGGGGCCAGGCAATCCCGGTCACCGTCTCCTCAG  310
J  93.5% (43/46)    IGHJ5*02     12   ................G..C..T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_217513

Length=203
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            238     3e-65
IGHJ4*01                                                                                              33.4    2e-05


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACCA	N/A	N/A	C	GGTCA	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	162	34	30	4	0	88.2
Total	N/A	N/A	162	157	5	0	96.9


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5109  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.9% (157/162)  IGHV3-7*01  47   ...........................................T..............................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------FR3-IMGT--------------------->
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  Q  G  T  T  V  T  V  S  S  
                    Query_5109  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCAAGGGACCACGGTCACCGTCTCCTCAG  180
V  96.9% (157/162)  IGHV3-7*01  137  ...............................................................G.TTC....------------------  208
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T                    
J  100.0% (17/17)   IGHJ4*01    32   -------------------------------------------------------------------------.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 18760230


Query= Query_217512

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           346     2e-97
IGHD2-15*01                                                                                           33.4    2e-05
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATGAAA	GATATTGTAGTGAAGGTAGTTGCTAC	CCTACA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTACCCTACATACTTTGACTTC	ARYERYCSEGSCYPTYFDF	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	255	34	0	88.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  K  I  S  C  K  T  S  G  Y  S  F  S  N  Y
                    Query_5110   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAAAAGCCCGGGCAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGTTTCAGCAACTA  90
V  88.2% (255/289)  IGHV5-51*01  6    .....................A..................G.......................GG............C..T.C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  S  G  E  G  L  E  W  M  G  I  I  Y  A  G  D  S  D  I  T  Y  S  P
                    Query_5110   91   TTGGATCGGCTGGGTGCGCCAGATGTCCGGTGAAGGCCTGGAGTGGATGGGAATCATCTATGCTGGCGACTCTGACATTACATATAGTCC  180
V  88.2% (255/289)  IGHV5-51*01  96   C........................C....GA...................G.........C....T........T.CC.G...C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  R  V  T  I  S  V  D  K  A  I  D  T  A  Y  V  Q  W  S  S  L  K  A  S  D  T  A
                    Query_5110   181  GTCCTTTGAGGGCCGGGTCACCATCTCAGTCGACAAGGCCATCGACACCGCCTACGTACAGTGGAGCAGTCTGAAGGCCTCGGACACCGC  270
V  88.2% (255/289)  IGHV5-51*01  186  ......CC.A....A..............C.......T.....AG..........C.G...........C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        T  Y  Y  C  A  R  Y  E  R  Y  C  S  E  G  S  C  Y  P  T  Y  F  D  F  W  G  Q  G  T  P  V
                    Query_5110   271  CACATATTACTGTGCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTACCCTACATACTTTGACTTCTGGGGCCAGGGAACCCCGGT  360
V  88.2% (255/289)  IGHV5-51*01  276  ..TG...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  88.5% (23/26)    IGHD2-15*01  3    --------------------------............GT.....C......--------------------------------------  28
J  95.7% (44/46)    IGHJ4*02     3    ----------------------------------------------------------..........A.................T...  34

                                                    
                                        T  V  S  S  
                    Query_5110   361  CACCGTCTCCTCAG  374
J  95.7% (44/46)    IGHJ4*02     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_217511

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           341     5e-96
IGHD2-21*02                                                                                           12.2    32   
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGCGGG	GACTGC	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCGGGGACTGCCTACTACTACGGCATGGACGTC	ARGAGTAYYYGMDV	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  N  S  G  G  Y  F  W  S  W  I  R  Q  T  P  G  K  G 
                    Query_5111   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAACAGTGGTGGTTACTTCTGGAGCTGGATCCGGCAGACCCCAGGGAAGGGA  90
V  93.6% (234/250)  IGHV4-61*08  49   ..................A.................G...G..............A...................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  M  Y  Y  S  G  S  T  D  Y  H  P  S  L  R  S  R  V  S  I  S  V  D  T  S 
                    Query_5111   91   CTGGAGTGGATTGGCTATATGTATTACAGTGGGAGCACCGATTACCACCCCTCCCTCAGGAGTCGAGTCAGCATATCAGTCGACACGTCC  180
V  93.6% (234/250)  IGHV4-61*08  139  ..............G.....C..................A.C...A............A...........C.........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  T  A  Y  Y 
                    Query_5111   181  AAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGGCGGGGACTGCCTACTAC  270
V  93.6% (234/250)  IGHV4-61*08  229  ....................G.....C...........T...............................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-21*02  17   -----------------------------------------------------------------------------......-------  22
J  98.2% (54/55)    IGHJ6*02     8    -----------------------------------------------------------------------------------.......  14

                                      -------------->                                 
                                       Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5111   271  TACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  98.2% (54/55)    IGHJ6*02     15   .....T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_217510

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           329     3e-92
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTACGGGTCGGGAAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCCTCTATTACTACGGGTCGGGAAGTTATTTTGACTCC	VRGLYYYGSGSYFDS	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  S  G  K  G 
                    Query_5112   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCGGCAGTGGTGGTTATTACTGGAGCTGGATTCGCCAGCACTCAGGGAAGGGC  90
V  92.0% (230/250)  IGHV4-31*03  49   ...............................G.......A.............C..............C.........C...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  V  G  H  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_5112   91   CTGGAGTGGGTCGGGCACATTTATTACAGTGGGACTACCTACTACAACCCGTCCCTCAAGAGTCGAGTTTCCATTTCAGTGGACACGTCT  180
V  92.0% (230/250)  IGHV4-31*03  139  .........A.T...T....C.............GC.................................A....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  F  N  S  V  T  A  A  D  T  A  V  Y  H  C  V  R  G  L  Y  Y  Y  G  S 
                    Query_5112   181  AAGAATCAGTTCTCCCTGAAGTTCAACTCTGTGACTGCCGCGGACACGGCCGTGTATCACTGTGTGAGAGGCCTCTATTACTACGGGTCG  270
V  92.0% (230/250)  IGHV4-31*03  229  .....C...............C.G.G...............................T......C.....--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  87.5% (21/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------........T..T...  16

                                      ----------------->                                  
                                       G  S  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5112   271  GGAAGTTATTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  87.5% (21/24)    IGHD3-10*01  17   ..G......-------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_263262

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           400     9e-114
IGHD7-27*01                                                                                           14.1    9.5   
IGHJ2*01                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD7-27*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	CTGGGGA	ACCTGGGCGTCTTT	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTGGGGAACCTGGGCGTCTTTCTTCGATCTC	ARDWGTWASFFDL	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	71	4	0	94.7
CDR1-IMGT	78	101	24	18	6	0	75
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	110	4	0	96.5
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	276	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  M 
                    Query_5113   3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTGTCATGCAAGGCGTCTGGTTATAGCTTTATG  92
V  93.2% (276/296)  IGHV1-18*01  1    .....T.....................................................C..C........T........C.C.....CC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       H  Y  G  I  S  W  V  R  Q  A  P  G  E  G  L  Q  W  M  G  W  I  R  A  D  N  G  D  T  N  Y 
                    Query_5113   93   CACTATGGTATTAGCTGGGTGCGACAGGCCCCTGGAGAAGGGCTTCAGTGGATGGGATGGATCAGAGCTGACAATGGTGACACAAACTAT  182
V  93.2% (276/296)  IGHV1-18*01  91   AG.........C........................C........G...................C...T........A...........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_5113   183  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGAGACACATCAACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  272
V  93.2% (276/296)  IGHV1-18*01  181  .........C........................C.........C.............................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  Y  C  A  R  D  W  G  T  W  A  S  F  F  D  L  W  G  R  G  S  L  V  T  V  S  S 
                    Query_5113   273  ACGGCCGTTTATTACTGTGCGAGAGACTGGGGAACCTGGGCGTCTTTCTTCGATCTCTGGGGCCGTGGCTCCCTGGTCACTGTCTCCTCA  362
V  93.2% (276/296)  IGHV1-18*01  271  ........G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD7-27*01  5    --------------------------.......---------------------------------------------------------  11
J  97.7% (43/44)    IGHJ2*01     10   -----------------------------------------------......................A....................  52

                                       
                                       
                    Query_5113   363  G  363
J  97.7% (43/44)    IGHJ2*01     53   .  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_217518

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           308     4e-86
IGHD5-18*01                                                                                           18.0    0.58 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CCAG	GGACACACCTATGGT	CATAGACACGTCA	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCCAGGGACACACCTATGGTCATAGACACGTCAAACTGGTTCGACCCC	AKARDTPMVIDTSNWFDP	230	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	24	0	0	100
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	21	3	0	87.5
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	236	7	7	0	0	100
Total	N/A	N/A	223	210	13	0	94.2


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  S  G  S 
                    Query_5114   14   TCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGGTATAAGTGGTAGT  103
V  94.2% (210/223)  IGHV3-23*01  73   ...............................G............................................C...T.........  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  V  S  T  Y  Y  V  D  S  V  K  G  R  F  T  V  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N 
                    Query_5114   104  GGTGTAAGCACATACTACGTAGACTCCGTGAAGGGCCGCTTCACCGTCTCCAGAGACAATGCCAAGAACACGTTGTATCTGCAAATGAAC  193
V  94.2% (210/223)  IGHV3-23*01  163  ....GT.............C..................G......A..............T...........C.................  252
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><----------------------CDR3-IMGT--------------------->
                                       G  L  R  A  E  D  A  A  I  Y  Y  C  A  K  A  R  D  T  P  M  V  I  D  T  S  N  W  F  D  P 
                    Query_5114   194  GGCCTGAGAGCCGAGGACGCGGCCATATATTACTGTGCGAAAGCCAGGGACACACCTATGGTCATAGACACGTCAAACTGGTTCGACCCC  283
V  94.2% (210/223)  IGHV3-23*01  253  A.................A.....G..................-----------------------------------------------  295
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  86.7% (13/15)    IGHD5-18*01  3    -----------------------------------------------...T...G.......----------------------------  17
J  100.0% (49/49)   IGHJ5*02     3    ---------------------------------------------------------------------------...............  17

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5114   284  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  317
J  100.0% (49/49)   IGHJ5*02     18   ..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_206144

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           290     2e-80
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	REATG*AMAGELTIITGWTP	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	107	51	45	5	1	88.2
CDR2-IMGT	108	128	21	15	6	0	71.4
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	251	222	22	7	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_5115   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  D   G  L  G  K  S  F  L  M  E  T  S  T  T  I  S  P  S  R  V  E  S  P  S  Q  *  T  R  P
                    Query_5115   91   CTGGA-TGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  179
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                        R  T  S  S  P  *  N  *  A  L  *  A  P  R  T  R  L  C  I  I  V  R  E  A  T  G  *  A  M  A
                    Query_5115   180  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  269
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                        G  E  L  T  I  I  T  G  W  T  P  G  A  K  G  P  R  S  P  S  P   
                    Query_5115   270  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  335
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_82431

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           286     1e-79
IGHD6-13*01                                                                                           16.1    2.0  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	230	262	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	105	9	0	92.1
Total	N/A	N/A	217	200	17	0	92.2


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  L  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_5116   13   GTCTGGACTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAATGGGTGGCAGTTATATGGTATGA  102
V  92.2% (200/217)  IGHV3-33*03  72   .......T....C..C.....C.....C......................................G.......................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  I  K  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  F  L  Q  M  N
                    Query_5116   103  TGGAATTAAAAAATTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCAAGAACACCCTGTTTCTGCAGATGAA  192
V  92.2% (200/217)  IGHV3-33*03  162  .....G...T....A...........................................A.............G....A......A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------CDR3-IMGT----------->                    
                                        S  L  R  A  D  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  D  P  W  G  Q  G  T  L  V
                    Query_5116   193  CAGCCTGAGAGCCGACGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  282
V  92.2% (200/217)  IGHV3-33*03  252  ...............G.........G.G.....C...-----------------------------------------------------  288
                                        S  L  R  A  E  D  T  A  V  Y  Y  C                                                      
D  90.9% (10/11)    IGHD6-13*01  7    ------------------------------------------....G......-------------------------------------  17
J  100.0% (46/46)   IGHJ5*02     6    ----------------------------------------------------------................................  37

                                                    
                                        T  V  S  S  
                    Query_5116   283  CACCGTCTCCTCAG  296
J  100.0% (46/46)   IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_336547

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	44	6	0	88
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	241	27	6	88


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_5117   1    CAGGACTGGTGAAGCCCTCGGAGACTCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.0% (241/274)  IGHV4-34*01  26   ........T.......T........C...T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_5117   91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.0% (241/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_5117   181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.0% (241/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_5117   271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.0% (241/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_336544

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           360     1e-101
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	ACATCGGGG	TAGCAGCAACTGGTAC	CCAGAGTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGAACATCGGGGTAGCAGCAACTGGTACCCAGAGTTTGATGCTTTTCATATT	ATEHRGSSNWYPEFDAFHI	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	25	4	0	86.2
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  V  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5118   1    GGTCCCTGAGACTCTCCTGCACTGTCTCTGGATTCACCTTTAGCAGCTATTCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-23*01  47   ...................TG.A.C.........................G......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  S  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5118   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTAGTAGCACATACTACGCAGACTCCGTGAAGGGTCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (240/250)  IGHV3-23*01  137  .............................G...............................C............................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  E  H  R  G  S  S  N  
                    Query_5118   181  AGAACACGCTGCATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGACAGAACATCGGGGTAGCAGCAACT  270
V  96.0% (240/250)  IGHV3-23*01  227  ...........T......................................................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD6-13*01  6    -------------------------------------------------------------------------------........G..  16

                                      -IMGT----------------------->                                  
                                      W  Y  P  E  F  D  A  F  H  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5118   271  GGTACCCAGAGTTTGATGCTTTTCATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  333
D  93.8% (15/16)    IGHD6-13*01  17   .....----------------------------------------------------------  21
J  96.0% (48/50)    IGHJ3*02     1    -------------..........G....C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_336545

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           372     3e-105
IGHD5-18*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGCTGACTCCGC	ACAGCTATGG	CCGCTCTT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGCTGACTCCGCACAGCTATGGCCGCTCTTACTTCTTTGAATAC	ARLTPHSYGRSYFFEY	286	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	72	66	63	3	0	95.5
CDR1-IMGT	73	96	24	22	2	0	91.7
FR2-IMGT	97	147	51	50	1	0	98
CDR2-IMGT	148	171	24	21	3	0	87.5
FR3-IMGT	172	285	114	101	13	0	88.6
CDR3-IMGT (germline)	286	288	3	3	0	0	100
Total	N/A	N/A	282	260	22	0	92.2


Alignments

                                      <----------------------------FR1-IMGT----------------------------><-------CDR1-IMGT------>
                                       L  E  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  F  T  N  Y  W 
                    Query_5119   7    CTGGAGCAGTCTGGGGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGGTTTACCAACTACTGG  96
V  92.2% (260/282)  IGHV5-51*03  10   ....T.........A...........A...............................................C.......G.......  99
                                       L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W 

                                      <--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------------
                                       I  G  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  F  P  R  D  S  D  T  T  Y  S  P  S 
                    Query_5119   97   ATCGGCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTTTCCTCGTGACTCTGACACCACATATAGCCCGTCC  186
V  92.2% (260/282)  IGHV5-51*03  100  ............................A..........................A....G..........T....G...C.........  189
                                       I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S 

                                      --------------------------------------FR3-IMGT--------------------------------------------
                                       F  K  G  H  V  T  I  S  A  D  D  S  M  S  T  A  Y  L  Q  W  S  S  L  K  A  R  D  T  A  V 
                    Query_5119   187  TTCAAAGGCCACGTCACCATCTCAGCCGACGACTCCATGTCCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCCGGGACACCGCCGTA  276
V  92.2% (260/282)  IGHV5-51*03  190  ...C.......G..................A.G.....CAG..................................TC..........A.G  279
                                       F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M 

                                      --------><-------------------CDR3-IMGT------------------>                                 
                                       Y  Y  C  A  R  L  T  P  H  S  Y  G  R  S  Y  F  F  E  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_5119   277  TATTACTGTGCGCGGCTGACTCCGCACAGCTATGGCCGCTCTTACTTCTTTGAATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  366
V  92.2% (260/282)  IGHV5-51*03  280  ............------------------------------------------------------------------------------  291
                                       Y  Y  C  A                                                                               
D  100.0% (10/10)   IGHD5-18*01  7    -------------------------..........-------------------------------------------------------  16
J  95.8% (46/48)    IGHJ4*02     1    -------------------------------------------...A......C....................................  47

                                       
                                       
                    Query_5119   367  G  367
J  95.8% (46/48)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_82435

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           321     7e-90
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TT	GCAGTGGC	ACCTACCGGGAACCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTGCAGTGGCACCTACCGGGAACCTCTTTGACAAG	ARLAVAPTGNLFDK	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  G  S  I  S  S  S  S  F  Y  W  C  W  V  R  Q  P  P  G  K  G  
                    Query_5120   4    CCCTGAGACTCTCCTGTAGTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTTCTACTGGTGCTGGGTCCGCCAGCCCCCAGGGAAGGGGC  93
V  91.2% (227/249)  IGHV4-39*01  50   .....TCC...A....C.C................................A.......G.....A........................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      P  E  W  I  G  S  I  N  Y  S  G  N  T  Y  Y  T  T  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_5120   94   CGGAGTGGATTGGGAGTATCAATTATAGTGGGAATACCTACTACACTACGTCCCTCAAGAGTCGAGTCACCATATCCGTTGACACGTCCA  183
V  91.2% (227/249)  IGHV4-39*01  140  T...................T............GC..........ACC...............................A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  L  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  A  V  A  P  T  G  
                    Query_5120   184  AGAATCAACTCTCCCTGAAGGTGAGCTCTGTGACCGCCGCCGACACGGCTGTGTATTACTGTGCGAGACTTGCAGTGGCACCTACCGGGA  273
V  91.2% (227/249)  IGHV4-39*01  230  ....C..GT...........C...................A............................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  8    -----------------------------------------------------------------------........-----------  15

                                      ------------->                                  
                                      N  L  F  D  K  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5120   274  ACCTCTTTGACAAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  95.5% (42/44)    IGHJ4*02     5    ----.......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_82434

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           300     9e-84
IGHD2-15*01                                                                                           12.2    36   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTC	ATTGTA	T	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTCATTGTATTACGGTATGGACGTC	ARGVADDGWRGGRRVSLYYGMDV	261	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	43	8	0	84.3
CDR2-IMGT	126	146	21	14	7	0	66.7
FR3-IMGT	147	260	114	98	16	0	86
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	230	38	0	85.8


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  V  S  L  T  C  A  V  Y  G  G  S  F  S  G  H  C  W  T  W  I  R  
                    Query_5121   1    CAGGACTGGTGAAGCCCTCGGAAACCGTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTTAGTGGTCACTGCTGGACCTGGATTCGCC  90
V  85.8% (230/268)  IGHV4-34*01  26   ........T.......T.....G...C..................................C......T...A.....G......C....  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  T  P  G  K  G  L  E  W  I  G  E  M  N  H  K  G  R  T  T  Y  N  P  S  L  M  S  R  V  T  
                    Query_5121   91   AGACACCAGGGAAGGGACTGGAATGGATTGGTGAGATGAATCACAAAGGCAGGACGACCTACAACCCGTCGCTAATGAGTCGAGTCACCA  180
V  85.8% (230/268)  IGHV4-34*01  116  ..C.C...........G.....G........G..A..C.....T.GT..A..C..C.A............C..C.A..............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  L  S  L  R  L  T  S  L  I  A  A  D  T  A  M  Y  Y  C  A  R  G  
                    Query_5121   181  TCTCAGTGGACACGTCCAAGAATCAGCTCTCCCTGAGATTGACCTCTTTAATCGCCGCGGACACGGCTATGTATTACTGTGCGAGAGGCG  270
V  85.8% (230/268)  IGHV4-34*01  206  .A.....A..............C...T.........AGC...G....G.G.C................G...................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  

                                      --------------------CDR3-IMGT----------------------------->                               
                                      V  A  D  D  G  W  R  G  G  R  R  V  S  L  Y  Y  G  M  D  V  W  G  Q  G  V  T  V  T  V  S  
                    Query_5121   271  TGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTCATTGTATTACGGTATGGACGTCTGGGGCCAGGGAGTCACGGTCACCGTCTCCT  360
D  100.0% (6/6)     IGHD2-15*01  6    -------------------------------------......-----------------------------------------------  11
J  91.7% (44/48)    IGHJ6*02     15   --------------------------------------------.......................A..GAC.................  60

                                        
                                      S 
                    Query_5121   361  CA  362
J  91.7% (44/48)    IGHJ6*02     61   ..  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_336540

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     1e-95
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5122   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGTCTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   .......................................A...G...........G...........................A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_5122   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_5122   181  CAGTTCTCCGTGAACCTGAGATCTGTGGCCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  94.3% (231/245)  IGHV4-59*01  229  .........C....G.....C......A...................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_5122   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_82436

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           282     3e-78
IGHD6-13*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CTTC	TATAACAGCAGTTGG	GTACTCGA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTTCTATAACAGCAGTTGGGTACTCGATGACTTC	ARDFYNSSWVLDDF	232	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	10	1	0	90.9
CDR1-IMGT	19	42	24	22	2	0	91.7
FR2-IMGT	43	93	51	48	3	0	94.1
CDR2-IMGT	94	117	24	15	9	0	62.5
FR3-IMGT	118	231	114	103	11	0	90.4
CDR3-IMGT (germline)	232	239	8	8	0	0	100
Total	N/A	N/A	232	206	26	0	88.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  R  I  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  *  V  S  S  I  
                    Query_5123   8    GTGCAGTCTCTGGATTCACCTTCAGAATCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGGAGTGAGTCTCATCGATTA  97
V  88.8% (206/232)  IGHV3-21*01  65   ......C..................T.G.......................................G........G........C....  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  G  S  T  H  V  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  K  Q  S  L  Y  L  
                    Query_5123   98   GTAGTGGCTCAACTCATGTATATTATGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAATGCCAAGCAATCACTGTATCTGC  187
V  88.8% (206/232)  IGHV3-21*01  155  .....A.TAGT.G.T.CA....C..C........A..................A.............C......A.C.............  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      Q  M  H  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  F  Y  N  S  S  W  V  L  D  D  F  W  
                    Query_5123   188  AAATGCACAGCCTGAGAGCCGACGACACGGCTGTATACTACTGTGCGAGAGACTTCTATAACAGCAGTTGGGTACTCGATGACTTCTGGG  277
V  88.8% (206/232)  IGHV3-21*01  245  .....A................G...........G..T..............--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  86.7% (13/15)    IGHD6-13*01  4    --------------------------------------------------------....G......C...-------------------  18
J  92.3% (36/39)    IGHJ4*02     8    -------------------------------------------------------------------------------.....A.....  18

                                                                  
                                      G  Q  G  A  L  V  T  V  S  S
                    Query_5123   278  GCCAGGGGGCCCTGGTCACCGTCTCCTC  305
J  92.3% (36/39)    IGHJ4*02     19   .......AA...................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_341522

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            375     3e-106
IGHD3-22*01                                                                                           44.9    5e-09 
IGHJ4*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATACCTGACCC	ACTATGATAGTAGTGGTTATTAC	CC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATACCTGACCCACTATGATAGTAGTGGTTATTACCCCTACTTTGACTAC	AKYLTHYDSSGYYPYFDY	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	113	1	0	99.1
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	242	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_5124   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  90
V  99.2% (242/244)  IGHV4-4*02   49   ........................................................................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_5124   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  99.2% (242/244)  IGHV4-4*02   139  ..........................................................................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  Y  L  T  H  Y  D  S  S 
                    Query_5124   181  AACCAGTTCTCCCTAAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAAATACCTGACCCACTATGATAGTAGT  270
V  99.2% (242/244)  IGHV4-4*02   229  ..............G.................................................--------------------------  292
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (23/23)   IGHD3-22*01  6    ----------------------------------------------------------------------------..............  19

                                      GT--------------------->                                  
                                       G  Y  Y  P  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5124   271  GGTTATTACCCCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  100.0% (23/23)   IGHD3-22*01  20   .........-------------------------------------------------  28
J  100.0% (47/47)   IGHJ4*02     2    -----------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_75414

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           339     2e-95
IGHD5-18*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTCAAGC	GTGGATACAGCT	TAG	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTCAAGCGTGGATACAGCTTAGATTACTACTTCTATTACGGTATGGACGTC	ARLKRGYSLDYYFYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  T  Y  V  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5125   1    GGTCCCTGAGACTCTCCTGTGTAGCGTCTGGATTCACCTTCAGTACCTATGTCATGCACTGGGTCCGCCAGGCTCCAGGTAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-33*01  47   .....................C.......................G.....G...........................C..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  T  A  I  W  H  D  G  T  N  K  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_5125   91   AGTGGGTGACAGCTATATGGCATGATGGAACTAATAAATACTATGCAGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.9% (232/247)  IGHV3-33*01  137  ........G...T.......T.........G.........................A.................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      R  N  T  L  Y  L  Q  M  S  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  L  K  R  G  Y  S  L  
                    Query_5125   181  GGAACACTCTGTATCTGCAAATGAGTAGCCTGAGAGTCGAGGACACGGCTGTGTATTATTGTGCGAGGCTCAAGCGTGGATACAGCTTAG  270
V  93.9% (232/247)  IGHV3-33*01  227  A......G................AC..........C.....................C........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (12/12)   IGHD5-18*01  1    ---------------------------------------------------------------------------............---  12

                                      -IMGT----------------------->                                 
                                      D  Y  Y  F  Y  Y  G  M  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_5125   271  ATTACTACTTCTATTACGGTATGGACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  332
J  95.2% (59/62)    IGHJ6*02     1    .........A...C......................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_75417

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           315     5e-88
IGHD3-10*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GATATATGGGG	TCGGGAAGTTATTAT	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGATATATGGGGTCGGGAAGTTATTATCTTGACTTC	ARGYMGSGSYYLDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	225	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  R  R  Y  W  I  H  W  V  R  Q  T  P  E  N  G  L  
                    Query_5126   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTCAGAAGGTACTGGATTCACTGGGTCCGCCAAACTCCAGAGAATGGCCTGG  90
V  90.4% (225/249)  IGHV3-74*01  47   ........................C..................T..C........G...............G......G...G..G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  S  Y  I  I  S  D  G  S  K  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  G  
                    Query_5126   91   CGTGGGTCTCATATATTATTAGTGACGGGAGTAAGACAACCTATGCGGACTCCGTTAAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  90.4% (225/249)  IGHV3-74*01  137  T..........CG.....A......T.......GC....G...C...........G...............................C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  V  Y  L  Q  M  N  N  L  R  A  E  D  T  A  I  Y  Y  C  A  R  G  Y  M  G  S  G  S  
                    Query_5126   181  AGAACACGGTGTATCTGCAAATGAACAATCTGAGAGCCGAGGACACGGCTATATATTATTGTGCAAGAGGATATATGGGGTCGGGAAGTT  270
V  90.4% (225/249)  IGHV3-74*01  227  ........C..................G......................G.G.....C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD3-10*01  14   --------------------------------------------------------------------------------.....G....  23

                                      ------------->                                  
                                      Y  Y  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5126   271  ATTATCTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  93.3% (14/15)    IGHD3-10*01  24   .....-------------------------------------------  28
J  97.6% (41/42)    IGHJ4*02     7    ------......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_263805

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           277     1e-76
IGHD2-15*01                                                                                           21.8    0.045
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATAGGC	AGTGGTGGTGGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATAGGCAGTGGTGGTGGCTGCTACTTTGACAAC	ARRLGSGVPCTPFRIGSGGGCYFDN	244	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	213	36	0	85.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  P  G  D  S  I  S  S  D  S  F  Y  W  A  W  I  R  Q  S  P  V  K  G 
                    Query_5127   1    ACCCTGTCCCTCACCTGCACTGTTCCCGGTGATTCCATCAGCAGTGACAGTTTCTACTGGGCCTGGATCCGCCAGTCCCCAGTGAAGGGA  90
V  85.5% (213/249)  IGHV4-39*02  49   .......................CT.T....GC............AGT....A........G.............C......G......G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  M  F  N  G  G  R  T  Y  S  N  P  S  L  K  N  R  V  T  I  S  A  D  T  S 
                    Query_5127   91   CTGGAGTGGATAGGGACTATGTTTAATGGTGGACGCACCTATTCCAACCCGTCCCTCAAGAATCGAGTCACCATATCTGCGGACACGTCC  180
V  85.5% (213/249)  IGHV4-39*02  139  ...........T....G...C.A.T..A....GA.......C.A.................G...............C.TA.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       R  N  H  F  S  L  R  L  T  Y  V  T  S  A  D  S  G  V  Y  Y  C  A  R  R  L  G  S  G  V  P 
                    Query_5127   181  AGGAACCACTTCTCCCTGAGGCTGACCTATGTGACCTCCGCAGACAGCGGTGTCTATTACTGTGCGAGACGTCTTGGGTCCGGTGTCCCC  270
V  85.5% (213/249)  IGHV4-39*02  229  .A.................A.....G..C.......G.........CG.C...G...............---------------------  297
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      ------CDR3-IMGT-------------------------------->                                 
                                       C  T  P  F  R  I  G  S  G  G  G  C  Y  F  D  N  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_5127   271  TGTACTCCCTTCCGCATAGGCAGTGGTGGTGGCTGCTACTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  351
D  92.9% (13/14)    IGHD2-15*01  11   ---------------------.........A....----------------------------------------------  24
J  97.8% (45/46)    IGHJ4*02     2    -----------------------------------..........T...................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_75411

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_5128   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTTCCACTTA  90
V  96.2% (280/291)  IGHV5-51*01  6    ..............................................................................C...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  P
                    Query_5128   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  96.2% (280/291)  IGHV5-51*01  96   C.......G.................................................T.................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_5128   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (280/291)  IGHV5-51*01  186  .......C.....................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_5128   271  CATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  96.2% (280/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD1-26*01  4    -----------------------------...G....A.....-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------......TA....................................  49

                                                   
                                        T  V  S  S 
                    Query_5128   361  CACCGTCTCGTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_75410

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD2-2*01                                                                                            27.6    7e-04 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAG	TTGTAGTAGTAACACCTGCT	G	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGTTGTAGTAGTAACACCTGCTGCTACGAAATGGACGTC	ARVSCSSNTCCYEMDV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	235	8	0	96.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_5129   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  96.7% (235/243)  IGHV4-59*01  50   .....TCC...A....C.............G...........................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_5129   94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGGTAGACACGTCCAAGAACC  183
V  96.7% (235/243)  IGHV4-59*01  140  ......................................................................A...................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  C  S  S  N  T  C  C  
                    Query_5129   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTAAGTTGTAGTAGTAACACCTGCTGCT  273
V  96.7% (235/243)  IGHV4-59*01  230  ..............................................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  90.0% (18/20)    IGHD2-2*01   7    -------------------------------------------------------------------...........C..G.....---  26
J  95.9% (47/49)    IGHJ6*02     14   ----------------------------------------------------------------------------------------..  15

                                      ------------->                                 
                                      Y  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5129   274  ACGAAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  95.9% (47/49)    IGHJ6*02     16   ...GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_75413

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           357     1e-100
IGHD1-1*01                                                                                            10.3    119   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	TGCAGGACCCA	TGGAA	GCCTGGGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATGCAGGACCCATGGAAGCCTGGGATTTTTGACTAC	AMQDPWKPGIFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	237	9	0	96.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  V  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5130   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATGTCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.3% (237/246)  IGHV3-21*01  47   .............................................G....AG......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5130   91   AGTGGGTCTCATCCATTAGTAGCAGTAGTAGTTACATATACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.3% (237/246)  IGHV3-21*01  137  ......................T.......................A...........................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  A  D  T  A  V  Y  Y  C  A  M  Q  D  P  W  K  P  G  
                    Query_5130   181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGAGCCGCGGACACGGCTGTTTATTACTGTGCGATGCAGGACCCATGGAAGCCTGGGA  270
V  96.3% (237/246)  IGHV3-21*01  227  ............A......A...................A............G.............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD1-1*01   9    -----------------------------------------------------------------------------.....--------  13

                                      ---------->                                  
                                      I  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5130   271  TTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (43/43)   IGHJ4*02     6    --...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_75412

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGTCGTATTCTTT	TGATAGTAGTGGT	CAGAGTCCCGCG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGTCGTATTCTTTTGATAGTAGTGGTCAGAGTCCCGCGTACTTTGACTAC	ARDLSYSFDSSGQSPAYFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5131   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  C  I  S  G  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5131   91   AGTGGGTCTCATGCATCAGTGGTGGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  ............C...T...A..A..................................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  S  Y  S  F  D  
                    Query_5131   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGTCGTATTCTTTTGATA  270
V  98.4% (246/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD3-22*01  10   -------------------------------------------------------------------------------------.....  14

                                      R3-IMGT------------------------>                                  
                                      S  S  G  Q  S  P  A  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_5131   271  GTAGTGGTCAGAGTCCCGCGTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  336
D  100.0% (13/13)   IGHD3-22*01  15   ........----------------------------------------------------------  22
J  97.8% (45/46)    IGHJ4*02     3    --------------------........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_39468

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            338     5e-95
IGHD6-6*01                                                                                            12.2    32   
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CAAG	TCGTCC	GAAATCGACA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACAAGTCGTCCGAAATCGACAACTTCTACGGTTTGGACGTC	AKDKSSEIDNFYGLDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  F  G  F  T  F  E  D  Y  A  M  H  W  V  R  Q  G  P  G  K  G  L  
                    Query_5132  1    GGTCCCTGAGACTCTCCTGTGCAGCCTTTGGATTCACGTTTGAAGATTATGCCATGCACTGGGTCCGGCAAGGTCCAGGGAAGGGCCTGG  90
V  93.2% (233/250)  IGHV3-9*01  47   ...........................C.........C.....T............................C.................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  I  S  W  N  G  Y  T  I  A  Y  A  D  S  V  K  G  R  F  T  L  S  R  D  N  A  
                    Query_5132  91   AATGGGTCTCAGGAATTAGTTGGAATGGTTATACCATAGCCTATGCGGACTCTGTGAAGGGCCGATTCACCCTCTCCAGAGACAACGCCA  180
V  93.2% (233/250)  IGHV3-9*01  137  .G...........T............A..GG..G.....G...............................A..................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                     R  N  S  L  Y  L  Q  M  N  S  L  G  A  D  D  T  A  F  Y  Y  C  A  K  D  K  S  S  E  I  D  
                    Query_5132  181  GGAACTCCCTGTATCTGCAAATGAACAGTCTGGGAGCTGACGACACGGCCTTCTATTATTGTGCAAAAGACAAGTCGTCCGAAATCGACA  270
V  93.2% (233/250)  IGHV3-9*01  227  A...............................A.......G...........G.....C...........--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD6-6*01  13   --------------------------------------------------------------------------......----------  18

                                     T------------------>                                 
                                     N  F  Y  G  L  D  V  W  G  Q  G  A  T  V  T  V  A  S 
                    Query_5132  271  ACTTCTACGGTTTGGACGTCTGGGGCCAAGGGGCCACGGTCACCGTCGCCTCA  323
J  92.5% (49/53)    IGHJ6*02    10   ...A.......A....................A..............T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_39469

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         357     1e-100
IGHD1-26*01                                                                                           18.0    0.57  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	TATAGTGGG	GGGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTATAGTGGGGGGGGCTTTGACTAC	ARDYSGGGFDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_5133     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGCTATGCAGTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-30-3*01  47   ..............................................C...........C...............................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5133     91   AGTGGGTGGCAGTTATATCATATGATGGAAGCAACAAATACTACACAGACTCCGTGAAGGGCCGATTCACCATCTCGAGAGACAATTCCA  180
V  95.6% (239/250)  IGHV3-30-3*01  137  ..................................T.........G...............................C.............  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                        K  N  K  V  Y  L  Q  M  D  S  L  R  V  E  D  T  A  L  Y  Y  C  A  R  D  Y  S  G  G  G  F  
                    Query_5133     181  AGAACAAGGTATATCTGCAAATGGACAGCCTGAGAGTTGAGGACACGGCTTTGTATTACTGTGCGAGAGACTATAGTGGGGGGGGCTTTG  270
V  95.6% (239/250)  IGHV3-30-3*01  227  ......C.C.G............A............C.............G...................--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD1-26*01    3    -----------------------------------------------------------------------.........----------  11
J  95.5% (42/44)    IGHJ4*02       5    -------------------------------------------------------------------------------------.....  9

                                        ---->                                  
                                        D  Y  G  G  Q  G  P  L  V  T  V  S  S  
                    Query_5133     271  ACTACGGGGGCCAGGGACCCCTGGTCACCGTCTCCTCAG  309
J  95.5% (42/44)    IGHJ4*02       10   .....T...........A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_39464

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           313     1e-87
IGHD3-16*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	ACTTA	GGGGGAG	ACCAACAATGGGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACTTAGGGGGAGACCAACAATGGGGGGACTACTTTGGCAAC	ANLGGDQQWGDYFGN	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	243	4	4	0	0	100
Total	N/A	N/A	240	220	20	0	91.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  E  L  E  
                    Query_5134   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCATCAATAGTTACTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAAGAACTGGAGT  93
V  91.7% (220/240)  IGHV4-59*08  50   .....TCC...A..................G........G.........C.............................G.G........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  V  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  G  R  V  T  M  S  I  D  T  S  K  S  
                    Query_5134   94   GGATTGGCTATGTCTATTACAGTGGGAGTACCAACTACAACCCCTCCCTTAAGGGTCGAGTCACCATGTCAATAGACACGTCCAAGAGCC  183
V  91.7% (220/240)  IGHV4-59*08  140  .......G...A................C....................C...A.............A...G...............A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  N  L  G  G  D  Q  Q  W  G  D  
                    Query_5134   184  AGTTCTCACTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTATATTACTGTGCGAACTTAGGGGGAGACCAACAATGGGGGGACT  273
V  91.7% (220/240)  IGHV4-59*08  230  .......C..........G...........................G.............------------------------------  289
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (7/7)     IGHD3-16*01  18   -----------------------------------------------------------------.......------------------  24
J  93.8% (45/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  F  G  N  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_5134   274  ACTTTGGCAACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  318
J  93.8% (45/48)    IGHJ4*02     4    ......A.T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_39465

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           397     8e-113
IGHD2-21*02                                                                                           16.1    2.5   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TTTG	GGTGATGACTG	GGATCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTTTGGGTGATGACTGGGATCAATACTACTTTGACTAC	ASLGDDWDQYYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	271	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  T  G  E  S  L  K  I  S  C  R  C  S  G  Y  R  F  T  N  Y
                    Query_5135   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGACCGGGGAGTCTCTGAAGATCTCCTGTAGGTGTTCTGGATACAGGTTTACCAATTA  90
V  94.1% (271/288)  IGHV5-51*01  6    ..................................C...........................A.G.............C.......GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  M  G  M  M  N  P  G  D  S  D  T  R  Y  S  P
                    Query_5135   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACATGGGAATGATGAATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  94.1% (271/288)  IGHV5-51*01  96   ........G...................................GG.....G..C..CT...............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  G  Q  V  T  I  S  A  D  E  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_5135   181  GCCCTTCCAAGGCCAGGTCACCATCTCAGCCGACGAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  94.1% (271/288)  IGHV5-51*01  186  .T................................A..........C...........................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  S  L  G  D  D  W  D  Q  Y  Y  F  D  Y  W  G  Q  G  S  L  V  S  V  S  S  
                    Query_5135   271  CATGTATTACTGTGCGAGTTTGGGTGATGACTGGGATCAATACTACTTTGACTACTGGGGCCAGGGATCCCTGGTCTCCGTCTCCTCAG  359
V  94.1% (271/288)  IGHV5-51*01  276  ..................-----------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                          
D  90.9% (10/11)    IGHD2-21*02  11   ----------------------....G......--------------------------------------------------------  21
J  95.8% (46/48)    IGHJ4*02     1    -----------------------------------------..........................A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_39467

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_5136   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_5136   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCGGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A..A................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  L  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_5136   181  CAGTTCTCCCTGAAGCTGAGCTCTCTGACCGCTGCGGACGCGGCCGTGTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  ........................G..............A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5136   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_39460

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           294     6e-82
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AATATTCACCACAA	TATGGT	ATCCGGCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGAAATATTCACCACAATATGGTATCCGGCCGACTAT	GREIFTTIWYPADY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  R  F  S  D  Y  S  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_5137   1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGTTTCAGGTTCAGTGACTATTCCATGCACTGGGTCCGCCAGGCTCCAGGCAGGGGGCTGG  90
V  87.6% (219/250)  IGHV3-33*01  47   ....................G..........A....CC......AG....GG.............................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  L  W  S  D  G  I  D  T  Q  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  S  
                    Query_5137   91   AGTGGGTGGCGATTCTCTGGTCCGATGGAATTGACACACAGTATGCAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCA  180
V  87.6% (219/250)  IGHV3-33*01  137  ..........AG..A.A....AT.......G.A.T.A.T.C............................C....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  G  V  Y  Y  C  G  R  E  I  F  T  T  I  W  
                    Query_5137   181  AGAACACTCTATATCTACAAATGAACAGCCTGCGGGCCGAGGACACGGGTGTCTATTATTGTGGGAGAGAAATATTCACCACAATATGGT  270
V  87.6% (219/250)  IGHV3-33*01  227  .......G..G.....G...............A.A.............C...G.....C....C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01  8    ------------------------------------------------------------------------------------......  13

                                      ------------->                                  
                                      Y  P  A  D  Y  W  G  Q  G  T  L  V  S  V  S  A  
                    Query_5137   271  ATCCGGCCGACTATTGGGGCCAGGGAACCCTGGTCAGCGTCTCCGCAG  318
J  92.5% (37/40)    IGHJ4*02     9    --------.....C......................C.......T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_39461

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           325     2e-91
IGHD1-1*01                                                                                            12.2    31   
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACAC	ACTGGA	TTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACACACTGGATTCTTGACTAT	ARDTHWILDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  H  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5138   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGTTTCACCTTCCGAAGTCACGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-33*01  47   ...............................A.........A.T..CT.T.G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  W  Y  D  G  S  N  K  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5138   91   AGTGGGTGGCGGCTATTTGGTATGATGGAAGCAATAAGAATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  91.6% (229/250)  IGHV3-33*01  137  ..........A.T...A..............T.....AT.C.................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  I  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  L  Y  Y  C  A  R  D  T  H  W  I  L  D  
                    Query_5138   181  AGAACATTCTGTATTTGCAAATGGACAGCCTGAGAGTCGAGGACACGGCTCTCTATTACTGTGCGAGAGATACACACTGGATTCTTGACT  270
V  91.6% (229/250)  IGHV3-33*01  227  ......CG......C........A............C.............G.G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-1*01   7    ---------------------------------------------------------------------------......---------  12
J  89.7% (35/39)    IGHJ4*02     7    ------------------------------------------------------------------------------------......  12

                                      ->                               
                                      Y  W  G  R  G  S  L  A  T  V  S  
                    Query_5138   271  ATTGGGGCCGGGGAAGCCTGGCCACCGTCTCCT  303
J  89.7% (35/39)    IGHJ4*02     13   .C.......A.....C.....T...........  45


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_39463

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           397     7e-113
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	271	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_5139   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  94.1% (271/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_5139   91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  94.1% (271/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  P  A  Y  L  Q  W  S  A  L  K  A  S  D  T  A
                    Query_5139   181  GCCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCCCCGCCTACCTGCAGTGGAGCGCCCTGAAGGCCTCGGACACCGC  270
V  94.1% (271/288)  IGHV5-51*01  186  .T.............G.........................T....A....................AG.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5139   271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  94.1% (271/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_146734

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATG	GTATTATTCTGATAACAGTGGTTATT	T	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATGGTATTATTCTGATAACAGTGGTTATTTCTTTGACTCC	AREWYYSDNSGYFFDS	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_5140   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGCCAGTCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...........................................G.....................G...C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  V  Y  Y  T  G  F  T  D  Y  N  P  S  L  K  S  R  I  T  I  S  L  D  T  S  K  N 
                    Query_5140   91   TGGCTTGGGTTTGTCTATTACACTGGATTCACCGACTACAACCCCTCCCTCAAGAGTCGAATCACCATATCACTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ...A......A.A.........G...GAG....A..........................G...........G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  W  Y  Y  S  D  N  S  G 
                    Query_5140   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGAATGGTATTATTCTGATAACAGTGGT  270
V  93.5% (229/245)  IGHV4-59*01  229  .............A.................................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (22/26)    IGHD3-22*01  1    --------------------------------------------------------------------......C.A.....GT......  22

                                      -------------->                                  
                                       Y  F  F  D  S  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_5140   271  TATTTCTTTGACTCCTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  319
D  84.6% (22/26)    IGHD3-22*01  23   ....---------------------------------------------  26
J  95.5% (42/44)    IGHJ4*02     5    -----........A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_146735

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           414     5e-118
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ3*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AGGGG	AGTGGGAGC	CCCTTCTTAGAGGCA	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAAGGGGAGTGGGAGCCCCTTCTTAGAGGCACTTTTGATATC	RKKGSGSPFLEALLIS	283	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	69	70	65	4	1	92.9
CDR1-IMGT	70	93	24	23	1	0	95.8
FR2-IMGT	94	144	51	50	1	0	98
CDR2-IMGT	145	168	24	23	1	0	95.8
FR3-IMGT	169	282	114	112	2	0	98.2
CDR3-IMGT (germline)	283	290	8	7	1	0	87.5
Total	N/A	N/A	291	280	10	1	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q   L  G  L  R  *  G  S  L  G  P  R  *  K  S  P  A  R  L  L  E  A  P  S  A  T  
                    Query_5141   1    GCAGCTGGTGCAGT-TGGGGCTGAGGTGAGGAAGCCTGGGTCCGCGGTGAAAGTCGCCTGCAAGGCTTCTGGAGGCACCTTCAGCAACTA  89
V  96.2% (280/291)  IGHV1-69*01  6    ..............C..............A.............T.......G...T..............................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                      M  L  S  A  G  C  D  R  P  L  D  K  G  L  S  G  W  E  G  S  S  L  S  L  V  Q  Q  T  T  H  
                    Query_5141   90   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTTTCTTTGGTACAGCAAACTACGCACA  179
V  96.2% (280/291)  IGHV1-69*01  96   ....................................................G...........A.........................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                      R  G  C  R  A  E  S  R  L  P  R  T  N  P  R  A  Q  P  T  W  S  *  A  A  *  D  L  R  T  R  
                    Query_5141   180  GAGGTTGCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  269
V  96.2% (280/291)  IGHV1-69*01  186  ..A...C...................................................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                      P  C  I  T  V  R  K  K  G  S  G  S  P  F  L  E  A  L  L  I  S  G  A  K  G  Q  W  S  S  S  
                    Query_5141   270  CGTGTATTACTGTGCGAAAGAAGGGGAGTGGGAGCCCCTTCTTAGAGGCACTTTTGATATCTGGGGCCAAGGGACAATGGTCATCGTCTC  359
V  96.2% (280/291)  IGHV1-69*01  276  .................G...---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (9/9)     IGHD1-26*01  6    --------------------------.........-------------------------------------------------------  14
J  97.8% (44/45)    IGHJ3*02     6    --------------------------------------------------.................................C......  45

                                           
                                      L  Q 
                    Query_5141   360  TTCAG  364
J  97.8% (44/45)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_146736

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           410     1e-116
IGHD6-13*01                                                                                           12.2    36    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	293	3	3	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_5142   4    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCA  93
V  95.2% (276/290)  IGHV5-51*01  2    ....G.....G...........................................................T...................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_5142   94   CCTACTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  183
V  95.2% (276/290)  IGHV5-51*01  92   G.........................A.......G.............G.........................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  T  P  L  K  A  S  D  
                    Query_5142   184  GTCCGTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAGCACCGCCTACCTGCAGTGGACCCCCCTGAAGGCCTCGGACA  273
V  95.2% (276/290)  IGHV5-51*01  182  .C......................C...................A........................G.AG.................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  V  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5142   274  CCGCCGTGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  95.2% (276/290)  IGHV5-51*01  272  .....A..............-------------------------------------------------------------------  291
                                      T  A  M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    -------------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_146737

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           269     2e-74
IGHD5-12*01                                                                                           12.2    31   
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGATGCGTAGAGA	TGGCTTCGA	AAACCAATATGGGAGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATGCGTAGAGATGGCTTCGAAAACCAATATGGGAGATTTGACTAC	ARMRRDGFENQYGRFDY	230	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	20	22	3	3	0	0	100
CDR1-IMGT	23	46	24	24	0	0	100
FR2-IMGT	47	97	51	49	2	0	96.1
CDR2-IMGT	98	121	24	21	3	0	87.5
FR3-IMGT	122	229	114	97	11	6	85.1
CDR3-IMGT (germline)	230	233	4	4	0	0	100
Total	N/A	N/A	220	198	16	6	90


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  Q  W  V  S  G  I  S  G  T 
                    Query_5143   20   TCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGCAGTGGGTCTCAGGTATTAGTGGTACT  109
V  90.0% (198/220)  IGHV3-23*01  73   ...............................................................G............C...........G.  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  G  T  I  F  Y  A  G  S  V  K  G  R  F  T  I  S  R  D  N  S  N        L  Y  L  Q  M  N 
                    Query_5143   110  GGTGGTACCATATTTTATGCGGGCTCCGTGAAGGGACGGTTCACCATCTCCAGAGACAATTCCAA------CTTGTATCTGCAAATGAAT  193
V  90.0% (198/220)  IGHV3-23*01  163  .......G..C..AC..C..A.A............C.............................GAACACGC................C  252
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><--------------------CDR3-IMGT-------------------->   
                                       S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  M  R  R  D  G  F  E  N  Q  Y  G  R  F  D  Y  W 
                    Query_5143   194  AGCCTGAGAGCCGACGACACGGCCGTCTATTACTGTGCGAGGATGCGTAGAGATGGCTTCGAAAACCAATATGGGAGATTTGACTACTGG  283
V  90.0% (198/220)  IGHV3-23*01  253  ..............G...........A.............--------------------------------------------------  292
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                    
D  88.9% (8/9)      IGHD5-12*01  11   -----------------------------------------------------.....A...----------------------------  19
J  100.0% (43/43)   IGHJ4*02     6    ------------------------------------------------------------------------------............  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_5143   284  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  314
J  100.0% (43/43)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_146730

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           286     1e-79
IGHD6-19*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGGGCAAG	ATAGTAGTGGCTGG	GGCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGAAGGGCAAGATAGTAGTGGCTGGGGCTACTACTTTGACACC	VREGQDSSGWGYYFDT	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	217	34	0	86.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  V  N  S  G  F  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_5144   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGGTCCGTCAATAGTGGTTTTTATTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  86.5% (217/251)  IGHV4-61*01  49   ...................C............C.......GC......AG...C..C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  D  W  I  G  N  V  Y  A  T  G  R  T  K  L  K  S  S  L  T  S  R  V  S  M  S  V  D  K  A 
                    Query_5144   91   CTGGACTGGATTGGCAATGTCTATGCCACTGGGAGAACCAAATTGAAGTCCTCCCTCACGAGTCGAGTCAGCATGTCCGTAGACAAGGCC  180
V  86.5% (217/251)  IGHV4-61*01  139  .....G........GT..A.....TA..G......C.....C.AC..CC.........A...........C...A..A.......C.T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  L  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  V  R  E  G  Q  D  S  S  G 
                    Query_5144   181  AAGAACCTGTTCTCCCTGAAACTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTTTTGTGTGCGAGAAGGGCAAGATAGTAGTGGC  270
V  86.5% (217/251)  IGHV4-61*01  229  .......A............G....G................................AC....C.A....-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD6-19*01  5    -------------------------------------------------------------------------------....C......  15

                                      GT------------------>                                  
                                       W  G  Y  Y  F  D  T  W  G  P  G  T  L  V  T  V  S  S  
                    Query_5144   271  TGGGGCTACTACTTTGACACCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  325
D  92.9% (13/14)    IGHD6-19*01  16   ...----------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*02     1    -------...........TA........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_146731

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         413     2e-117
IGHD3-3*01                                                                                            27.6    8e-04 
IGHJ3*01                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-3*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GA	GTATGACCATTTTTGGAGTG	ACCATATTAGT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGTATGACCATTTTTGGAGTGACCATATTAGTTGCTTTTGATTTG	ARSMTIFGVTILVAFDL	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	276	12	0	95.8


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  T  E  V  K  K  P  G  E  S  L  T  I  S  C  R  G  S  G  Y  S  F  T  D  Y
                    Query_5145     1    GCAGCTGGTGCAGTCTGGAACAGAGGTGAAAAAGCCCGGGGAGTCTCTGACGATCTCCTGTAGGGGTTCTGGATACAGCTTTACCGACTA  90
V  95.8% (276/288)  IGHV5-10-1*01  6    ...................G..............................G...........A......................AG...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_5145     91   CTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  95.8% (276/288)  IGHV5-10-1*01  96   ........G.................................................................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  A  M  S  V  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_5145     181  GTCCTTCCAAGGCCACGTCGCCATGTCGGTCGACAAGTCCATCAACACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.8% (276/288)  IGHV5-10-1*01  186  ...................A....C..A.CT.............G.............................................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------------CDR3-IMGT-------------------->                          
                                          M  Y  Y  C  A  R  S  M  T  I  F  G  V  T  I  L  V  A  F  D  L  W  G  Q  G  T  F  I  T  V
                    Query_5145     271  CATGTATTACTGTGCGAGGAGTATGACCATTTTTGGAGTGACCATATTAGTTGCTTTTGATTTGTGGGGCCAAGGGACATTCATCACCGT  360
V  95.8% (276/288)  IGHV5-10-1*01  276  ..................------------------------------------------------------------------------  293
                                          M  Y  Y  C  A                                                                           
D  90.0% (18/20)    IGHD3-3*01     1    --------------------....T..G............--------------------------------------------------  20
J  89.4% (42/47)    IGHJ3*01       4    ---------------------------------------------------..........G.C...............A.GG.......  42

                                                
                                          S  S  
                    Query_5145     361  CTCTTCAG  368
J  89.4% (42/47)    IGHJ3*01       43   ........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_146732

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           402     3e-114
IGHD2-8*02                                                                                            12.2    34    
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	A	GTACTG	ACACC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAAGTACTGACACCGACTAT	AGSTDTDY	284	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  D  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_5146   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCGGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  94.5% (273/289)  IGHV5-51*03  6    .............................A............G..................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  A  T  T  R  Y  S  P
                    Query_5146   91   CTGGATCGGCTGGGTGCGCCAGAGGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACGCTACTACCAGATACAGCCC  180
V  94.5% (273/289)  IGHV5-51*03  96   .......................T...............................A..............T..GA...............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  S  A
                    Query_5146   181  GTCGTTCGAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACAGCGC  270
V  94.5% (273/289)  IGHV5-51*03  186  ...C...C..............A................................C..............................C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------CDR3-IMGT------>                                  
                                        M  Y  Y  C  A  G  S  T  D  T  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_5146   271  CATGTATTATTGTGCGGGAAGTACTGACACCGACTATTGGGGCCAGGGCACCCTGGTCATCGTCTCCTCAG  341
V  94.5% (273/289)  IGHV5-51*03  276  .........C......A..----------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                     
D  100.0% (6/6)     IGHD2-8*02   9    --------------------......---------------------------------------------  14
J  92.5% (37/40)    IGHJ4*02     9    -------------------------------.....C...........A..........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_146733

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            315     5e-88
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCTCTCCTAGAAGTGACTGGGCGAGGG	GGGGGAGT	N/A	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCTCTCCTAGAAGTGACTGGGCGAGGGGGGGGAGTTGGTTCGACCCC	AASPRSDWARGGSWFDP	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  G  I  T  Y  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_5147   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCGGCATTACTTACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.4% (222/243)  IGHV4-4*02   49   .......................................A...G..G.A.........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  A  Y  Y  S  G  S  N  N  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  K  S  K 
                    Query_5147   91   GAGTGGATTGGGGAAGCCTATTATAGTGGGAGCAACAACTACAACCCGTCCCTCAAAAGTCGAGTCGCCATATCAGTGGACAAGTCCAAG  180
V  91.4% (222/243)  IGHV4-4*02   139  ...............AT....C............C.....................G.........A..........A............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  E  F  S  L  R  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  A  S  P  R  S  D  W  A  R 
                    Query_5147   181  AACGAGTTTTCCCTGAGGTTAACGTCTATGACCGCCGCGGACACGGCCGTATATTATTGTGCGGCCTCTCCTAGAAGTGACTGGGCGAGG  270
V  91.4% (222/243)  IGHV4-4*02   229  ...C....C.......A.C.G.GC...G......................G.....C......---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            

                                      -------------------->                                  
                                       G  G  S  W  F  D  P  W  G  Q  G  I  L  V  I  V  S  S  
                    Query_5147   271  GGGGGGAGTTGGTTCGACCCCTGGGGCCAGGGAATCCTGGTCATCGTCTCCTCAG  325
D  100.0% (8/8)     IGHD3-16*01  18   -........----------------------------------------------  25
J  95.7% (44/46)    IGHJ5*02     6    ---------.........................C........C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_195842

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           428     3e-122
IGHD3-22*01                                                                                           39.1    3e-07 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AG	TTACTATGATAGTGGTGGTTATT	TCGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTTACTATGATAGTGGTGGTTATTTCGGCTTTGACTAC	ARSYYDSGGYFGFDY	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	112	2	0	98.2
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	294	284	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  T  F  S 
                    Query_5148   4    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAGC  93
V  96.6% (284/294)  IGHV1-69*01  1    ...G...................G.......................................................G..........  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  I  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  F  L  G  T  T  N  Q 
                    Query_5148   94   AGCTATATTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTTTCTTGGGTACAACAAACCAA  183
V  96.6% (284/294)  IGHV1-69*01  91   ......GC.............................................................A....T......G.....T.C  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_5148   184  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGAC  273
V  96.6% (284/294)  IGHV1-69*01  181  ..........................................................................................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  R  S  Y  Y  D  S  G  G  Y  F  G  F  D  Y  W  G  Q  G  T  L  V  T  V 
                    Query_5148   274  ACGGCCGTGTATTACTGTGCGAGAAGTTACTATGATAGTGGTGGTTATTTCGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTC  363
V  96.6% (284/294)  IGHV1-69*01  271  ........................------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  95.7% (22/23)    IGHD3-22*01  4    --------------------------.............A.........-----------------------------------------  26
J  100.0% (44/44)   IGHJ4*02     5    -----------------------------------------------------.....................................  41

                                             
                                       S  S  
                    Query_5148   364  TCCTCAG  370
J  100.0% (44/44)   IGHJ4*02     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_195843

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCTACGAGGCGAGTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATATCTACGAGGCGAGTCATCAATATAGTGGCTACATGATTAATGACTAC	GKDIYEASHQYSGYMINDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5149   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGATATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ..............................................C......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  G  I  S  E  S  G  G  S  T  N  Y  A  D  S  V  K  G  R  F  A  I  S  R  D  N  A  
                    Query_5149   91   ATTGGGTCTCAGGTATTAGTGAAAGTGGTGGTAGCACAAACTACGCAGACTCCGTGAAGGGCCGGTTCGCCATCTCCAGAGACAATGCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  .G..........C........GT...............T.............................A.................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  I  L  Y  L  Q  M  I  S  L  R  A  E  D  T  A  V  Y  Y  C  G  K  D  I  Y  E  A  S  H  
                    Query_5149   181  AGAATATCCTGTATCTACAAATGATCAGCCTCAGAGCCGAGGACACGGCCGTATATTACTGTGGGAAAGATATCTACGAGGCGAGTCATC  270
V  93.6% (234/250)  IGHV3-23*01  227  ....C.CG........G.......A......G...............................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_5149   271  AATATAGTGGCTACATGATTAATGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  97.6% (40/41)    IGHJ4*02     8    ----------------------.............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_195840

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD3-16*02                                                                                           39.1    3e-07
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	CCAGGCCGG	TTACGTTTGGGGGCGTTATCGTT	TTTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCCAGGCCGGTTACGTTTGGGGGCGTTATCGTTTTTCCTACTTTGACTCC	ARGQAGYVWGRYRFSYFDS	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5150   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCATTCAGTGATTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGTCTGGAA  90
V  94.7% (232/245)  IGHV4-34*01  49   ...................................C.......G...........G...........................G.....G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  K  H  S  G  S  T  Y  S  N  P  S  L  K  S  R  V  T  T  S  V  D  T  S  K  N 
                    Query_5150   91   TGGATTGGGGAAATCAAGCATAGTGGAAGCACCTACTCCAACCCGTCCCTCAAGAGTCGAGTCACCACATCAGTAGACACGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-34*01  139  .................T...............A...A.............................T......................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  H  Y  C  A  R  G  Q  A  G  Y  V  W  G  R 
                    Query_5150   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCGGACACGGCTGTGCATTACTGTGCGCGAGGCCAGGCCGGTTACGTTTGGGGGCGT  270
V  94.7% (232/245)  IGHV4-34*01  229  .............A......C...........................T...........A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  95.7% (22/23)    IGHD3-16*02  10   --------------------------------------------------------------------------.............A..  25

                                      ----------------------->                                  
                                       Y  R  F  S  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5150   271  TATCGTTTTTCCTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.7% (22/23)    IGHD3-16*02  26   .......---------------------------------------------------  32
J  97.9% (46/47)    IGHJ4*02     2    -----------...........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_146738

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            305     3e-85
IGHD3-10*01                                                                                           12.2    34   
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TCAGGGGACACCCAGAGATGGCGCAGTCAC	TTCGGG	AAGGAAGCGGTCCTCATCCCGGGGGCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGGGGACACCCAGAGATGGCGCAGTCACTTCGGGAAGGAAGCGGTCCTCATCCCGGGGGCCTC	VRGHPEMAQSLREGSGPHPGGL	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	219	24	0	90.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5151   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTAGTTTCAGTAGTTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.1% (219/243)  IGHV3-7*03   47   ..................................C.CC..T.....C...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  G  N  I  K  Q  D  G  S  D  K  Y  Y  V  G  S  V  M  G  R  F  T  I  S  R  D  N  V  
                    Query_5151   91   AGTGGGTGGGCAACATAAAACAAGATGGAAGTGACAAATACTATGTGGGCTCTGTAATGGGCCGATTCACCATTTCCAGAGACAACGTCA  180
V  90.1% (219/243)  IGHV3-7*03   137  .........C.........G..............G.............A......G.A...............C.............C..  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      N  N  S  L  F  L  Q  M  I  S  L  R  A  E  D  T  A  I  Y  Y  C  V  R  G  H  P  E  M  A  Q  
                    Query_5151   181  ATAACTCACTCTTTCTGCAAATGATTTCCCTGAGAGCCGAAGACACGGCCATTTATTACTGTGTCAGGGGACACCCAGAGATGGCGCAGT  270
V  90.1% (219/243)  IGHV3-7*03   227  .G........G.A...........ACAG............G.........G.G..........---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             

                                      -CDR3-IMGT--------------------------->                                  
                                      S  L  R  E  G  S  G  P  H  P  G  G  L  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_5151   271  CACTTCGGGAAGGAAGCGGTCCTCATCCCGGGGGCCTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  342
D  100.0% (6/6)     IGHD3-10*01  13   ---......---------------------------------------------------------------  18
J  97.1% (34/35)    IGHJ4*02     14   -------------------------------------......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_195844

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           350     8e-99
IGHD5-12*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACCCCTCGGGA	TGGCTAC	AATCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATACCCCTCGGGATGGCTACAATCCTTTTGACTAC	VRDTPRDGYNPFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5152   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCATGTTCAGTAGATATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-33*01  47   ....................................CC........C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  S  D  G  S  Y  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5152   91   AGTGGGTGGCAGTTATATGGTCTGATGGAAGTTATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (237/250)  IGHV3-33*01  137  .....................A..........A.........................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  K  L  Y  L  E  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  T  P  R  D  G  Y  
                    Query_5152   181  AGAACAAGTTATATCTGGAAATGAGCAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGTCAGAGATACCCCTCGGGATGGCTACA  270
V  94.8% (237/250)  IGHV3-33*01  227  ......C.C.G......C......A...........................G..........CG.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD5-12*01  11   ----------------------------------------------------------------------------------.......-  17

                                      ------------->                                  
                                      N  P  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_5152   271  ATCCTTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  97.7% (42/43)    IGHJ4*02     6    -----......................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_195845

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           283     1e-78
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ATTACTCTGGTTCGGGGA	AAAGTCAAGGATTTCGGAAAT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGATTACTCTGGTTCGGGGAAAAGTCAAGGATTTCGGAAATTGGCTCGACCCC	ARDRITLVRGKVKDFGNWLDP	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	96	18	0	84.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	216	35	0	86.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  D  G  G  Y  T  W  N  W  I  R  Q  H  P  Q  K  G 
                    Query_5153   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGTGATGGTGGTTATACCTGGAATTGGATCCGCCAGCACCCACAGAAGGGC  90
V  86.1% (216/251)  IGHV4-31*03  49   ...............................G.........CAG.........CTA.....GC..................GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  A  Y  S  G  R  A  D  Y  N  P  S  L  R  S  R  L  S  V  S  K  D  T  S 
                    Query_5153   91   CTGGAGTGGCTTGGGTCCATCGCTTACAGTGGGAGAGCCGATTACAATCCGTCCCTCAGGAGTCGACTTTCCGTGTCGAAGGACACGTCT  180
V  86.1% (216/251)  IGHV4-31*03  139  .........A......A....TA............CA..T.C.....C..........A.......G..A..A.A..AGTA.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  V  S  L  N  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  I  T  L  V  R 
                    Query_5153   181  AAGAACCAGGTCTCCCTTAACGTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTATTGTGCGAGAGATCGGATTACTCTGGTTCGG  270
V  86.1% (216/251)  IGHV4-31*03  229  .........T.......G..GC...............................G.....C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  3    ---------------------------------------------------------------------------......A........  17

                                      CDR3-IMGT-------------------------->                                  
                                       G  K  V  K  D  F  G  N  W  L  D  P  W  G  Q  G  T  Q  V  I  V  T  S  
                    Query_5153   271  GGAAAAGTCAAGGATTTCGGAAATTGGCTCGACCCCTGGGGCCAGGGAACCCAGGTCATCGTCACCTCAG  340
D  94.4% (17/18)    IGHD3-10*01  18   ...-------------------------------------------------------------------  20
J  91.3% (42/46)    IGHJ5*02     6    ------------------------...T........................T.....C....T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_145284

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           310     1e-86
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGGGTATGA	ATTACTAC	CGGCTGCCAGTAATATA	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGGGTATGAATTACTACCGGCTGCCAGTAATATAATGGACGCC	ARVGYELLPAASNIMDA	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  F  R  G  Y  L  W  S  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_5154   1    ACCCTGTCCCTCACCTGCGCTGTATCTGGTGGGTCCTTCAGAGGTTACCTCTGGAGTTGGATCCGCCAGGCCCCAGGGAAGGGGCTGGAG  90
V  90.6% (221/244)  IGHV4-34*01  49   .......................C.A...............T......TA......C............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  T  N  H  R  G  S  T  N  Y  N  P  S  L  K  S  R  V  V  I  S  V  G  T  S  K  N 
                    Query_5154   91   TGGATTGGGGAAACCAATCATAGAGGATCCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCGTCATCTCAGTTGGCACGTCCAAAAAC  180
V  90.6% (221/244)  IGHV4-34*01  139  .............T.........T...AG..................................AC...A.....A.A.........G...  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  G  Y  E  L  L  P  A  A 
                    Query_5154   181  CAGTTCTCCTTGAGGCTGACCTCAGTGACCGCCGCGGACACGGCTGTCTATTATTGTGCGAGAGTGGGGTATGAATTACTACCGGCTGCC  270
V  90.6% (221/244)  IGHV4-34*01  229  .........C...A.....G...T.......................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-22*01  24   --------------------------------------------------------------------------........--------  31

                                      ----------------->                                 
                                       S  N  I  M  D  A  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5154   271  AGTAATATAATGGACGCCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  321
J  97.6% (41/42)    IGHJ6*02     21   ---------.......T..................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_145287

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     4e-95
IGHD1-1*01                                                                                            12.2    31   
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTAC	AEEKRRVPRGTFHY	237	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	112	2	0	98.2
CDR3-IMGT (germline)	237	244	8	7	1	0	87.5
Total	N/A	N/A	232	224	8	0	96.6


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  I  T  F  T  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  
                    Query_5155   13   GTGCAGCCTCTGGAATCACCTTTACCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCCATTA  102
V  96.6% (224/232)  IGHV3-23*01  65   ..............T.........G..G.........................................................T....  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  K  N  T  L  Y  L  
                    Query_5155   103  GTGGTGGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGAAGAACACGCTGTATCTGC  192
V  96.6% (224/232)  IGHV3-23*01  155  .....A......................................................G.........C...................  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  G  T  F  H  Y  W  
                    Query_5155   193  AAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTACTGGG  282
V  96.6% (224/232)  IGHV3-23*01  245  ...............................................A....--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------......------------------------------  17
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------------------------------------------....G.........  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_5155   283  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.7% (43/44)    IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_145286

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           330     1e-92
IGHD1-26*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGAGGGC	GGGAGCT	C	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGAGGGCGGGAGCTCGACTAC	ARGGGRELDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  H  W  M  H  W  V  R  Q  V  P  G  K  G  P  
                    Query_5156   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTCAGTAGCCACTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGGCCGG  90
V  92.4% (230/249)  IGHV3-74*01  47   .....................C.........................T........................C..............T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  H  I  N  V  D  G  R  I  T  R  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5156   91   TGTGGGTCTCACATATCAATGTTGATGGGAGAATCACAAGATACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (230/249)  IGHV3-74*01  137  ............G...T...AG.........T.G......C.................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  V  N  S  L  R  V  E  D  M  G  V  Y  Y  C  A  R  G  G  G  R  E  L  D  
                    Query_5156   181  AGAACACACTTTATTTGCAAGTGAACAGTCTGAGAGTCGAGGACATGGGTGTGTATTACTGTGCGAGAGGAGGAGGGCGGGAGCTCGACT  270
V  92.4% (230/249)  IGHV3-74*01  227  .......G..G...C.....A...............C........C..C...............A....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  9    ------------------------------------------------------------------------------.......-----  15
J  100.0% (40/40)   IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5156   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (40/40)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_145281

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            308     4e-86
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGCAGCCTTA	GACTACGGTG	CTAAGAGGCTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCGCAGCCTTAGACTACGGTGCTAAGAGGCTTTTTGACTAC	VRGAALDYGAKRLFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	123	24	19	5	0	79.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	231	214	17	0	92.6


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  
                    Query_5157   14   GTGCAGCCTCTGGATTCACCTTTAGTAGTTTTTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAA  103
V  92.6% (214/231)  IGHV3-7*03   65   ............................C.A.........C.................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      K  Q  A  G  S  D  E  S  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  S  A  R  N  S  L  Y  L  
                    Query_5157   104  AGCAAGCTGGCAGTGACGAGTCCTATGTGGACTCTGTGAGGGGCCGCTTCACCATCTCCAGAGACAGCGCCAGGAACTCACTGTATCTCC  193
V  92.6% (214/231)  IGHV3-7*03   155  ......A...A.....GA.A.A.................A......A...................A.....A...............G.  244
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  V  R  G  A  A  L  D  Y  G  A  K  R  L  F  D  
                    Query_5157   194  AAATGAACACCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGTGAGAGGCGCAGCCTTAGACTACGGTGCTAAGAGGCTTTTTGACT  283
V  92.6% (214/231)  IGHV3-7*03   245  .........G........................G..........C.....---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (10/10)   IGHD4-17*01  2    --------------------------------------------------------------..........------------------  11
J  100.0% (43/43)   IGHJ4*02     6    -----------------------------------------------------------------------------------.......  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5157   284  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_145280

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           279     3e-77
IGHD4-4*01                                                                                            12.2    32   
IGHJ5*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD4-4*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TACCCCTGGGCATC	GTAACT	CCTGGGGT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATACCCCTGGGCATCGTAACTCCTGGGGTGACCTC	ARDTPGHRNSWGDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	214	36	0	85.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  D  Y  E  M  N  W  V  R  Q  V  P  G  R  G  L  
                    Query_5158   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTTACCTTCAGTGATTATGAGATGAACTGGGTCCGCCAGGTTCCAGGGAGGGGCCTGG  90
V  85.6% (214/250)  IGHV3-48*03  47   ........................C.........C.........AG......A...................C........A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  T  D  G  G  N  P  I  Y  A  D  S  V  R  G  R  F  T  M  S  R  D  N  A  
                    Query_5158   91   AGTGGCTCTCATACATTAGCACTGACGGTGGTAATCCGATTTATGCAGACTCTGTGAGGGGCCGATTCACCATGTCCAGAGACAACGCCC  180
V  85.6% (214/250)  IGHV3-48*03  137  .....G.T...........T.G.AGT...A...CCATATAC..C.............A...............C...............A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      Q  N  S  L  F  L  Q  M  D  S  L  R  A  D  D  T  G  V  Y  Y  C  A  R  D  T  P  G  H  R  N  
                    Query_5158   181  AGAACTCACTGTTCCTGCAAATGGACAGCCTGAGGGCCGACGACACGGGAGTTTATTACTGTGCGAGGGATACCCCTGGGCATCGTAACT  270
V  85.6% (214/250)  IGHV3-48*03  227  ............AT.........A..........A.....G.......CT.................A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD4-4*01   9    ------------------------------------------------------------------------------------......  14

                                      ------------->                                
                                      S  W  G  D  L  W  G  Q  G  I  L  V  T  V  S  S
                    Query_5158   271  CCTGGGGTGACCTCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTC  316
J  94.7% (36/38)    IGHJ5*02     12   --------....C..............C..................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_145283

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5159   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.2% (241/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_5159   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.2% (241/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  *  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_5159   181  AAGAACTAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.2% (241/248)  IGHV4-31*03  229  ......C.............................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5159   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_145282

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           411     5e-117
IGHD3-10*01                                                                                           27.6    8e-04 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGCTCGGC	GGTTCGGGGAGTTA	CC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTCGGCGGTTCGGGGAGTTACCACTAC	ARGLGGSGSYHY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	19	5	0	79.2
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	293	278	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_5160   1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCAGGAGGCACCTTCAGC  90
V  94.9% (278/293)  IGHV1-69*06  1    ...G...................G..................................................T...............  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  V  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  V  P  V  L  R  T  A  N  Y 
                    Query_5160   91   AGCTATGTTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGGGGATCGTCCCTGTCCTTCGTACAGCGAACTAC  180
V  94.9% (278/293)  IGHV1-69*06  91   .......C.....G..........................................A......A.....A..T..G.......A......  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  D  R  V  T  I  T  A  D  K  S  R  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_5160   181  GCACAGAAGTTCCAGGACAGAGTCACGATTACCGCGGACAAATCCAGGAGTACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGAC  270
V  94.9% (278/293)  IGHV1-69*06  181  ................G.............................C...C....C..................................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                
                                       T  A  V  Y  Y  C  A  R  G  L  G  G  S  G  S  Y  H  Y  W  G  Q  G  T  L  V  A  V  S  S
                    Query_5160   271  ACGGCCGTGTATTACTGTGCGAGGGGGCTCGGCGGTTCGGGGAGTTACCACTACTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  356
V  94.9% (278/293)  IGHV1-69*06  271  .......................---------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                  
D  100.0% (14/14)   IGHD3-10*01  11   ---------------------------------..............---------------------------------------  24
J  97.3% (36/37)    IGHJ4*02     10   -------------------------------------------------..........................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_145289

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           329     3e-92
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GGGGCCTTCAA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCTTCAAGATGCTTTTGATATC	ARGGLQDAFDI	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	228	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  A  Y  F  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5161   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGCGCCTACTTCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTAG  90
V  92.7% (228/246)  IGHV3-53*01  47   ...........................................TAG.A...A.....G...........................G..G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  I  M  Y  T  G  G  F  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  N  
                    Query_5161   91   AGTGGGTCTCAATTATGTATACCGGTGGATTCACATACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAACA  180
V  92.7% (228/246)  IGHV3-53*01  137  ...........G....T....G......TAG............A............................................G.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  L  Q  D  A  F  D  
                    Query_5161   181  ACACCCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAGAGGGGGCCTTCAAGATGCTTTTGATA  270
V  92.7% (228/246)  IGHV3-53*01  227  ....G............................................G................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
J  95.9% (47/49)    IGHJ3*02     2    -----------------------------------------------------------------------------.............  14

                                      ->                                  
                                      I  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_5161   271  TCTGGGGCCAAGGCACAAGGGTCACCGTCTCTTCAG  306
J  95.9% (47/49)    IGHJ3*02     15   .............G....T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_145288

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           277     9e-77
IGHD6-19*01                                                                                           10.3    121  
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	ATCGCATCTCAG	GCAGT	TGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAATCGCATCTCAGGCAGTTGTTCTACTACGACGGTATGGACGTC	AKESHLRQLFYYDGMDV	237	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	17	7	0	70.8
FR3-IMGT	123	236	114	99	15	0	86.8
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	233	205	28	0	88


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  N  L  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  T 
                    Query_5162   12   TGTGCAGCCTCTGGATTCACCTTTAACCTCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCTTCTACT  101
V  88.0% (205/233)  IGHV3-23*01  64   .........................G.AG...........G..........................................AG...T.  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  G  G  I  S  P  R  Y  A  D  S  F  K  G  R  F  T  I  S  R  D  N  S  K  N  M  L  W  L 
                    Query_5162   102  AGTAGTGGTGGTATTAGTCCACGCTACGCCGACTCCTTCAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACATGCTGTGGCTG  191
V  88.0% (205/233)  IGHV3-23*01  154  ...G..A.....GG...CA..TA......A......G.G........................................C.....AT...  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------------CDR3-IMGT---------------
                                       H  M  T  S  L  T  V  D  D  T  A  I  Y  Y  C  A  K  E  S  H  L  R  Q  L  F  Y  Y  D  G  M 
                    Query_5162   192  CATATGACCAGCCTGACAGTCGACGACACGGCCATTTATTACTGTGCGAAAGAATCGCATCTCAGGCAGTTGTTCTACTACGACGGTATG  281
V  88.0% (205/233)  IGHV3-23*01  244  ..A....A........G..C...G.........G.A.................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (5/5)     IGHD6-19*01  8    -----------------------------------------------------------------.....--------------------  12
J  98.2% (54/55)    IGHJ6*02     8    --------------------------------------------------------------------------.......T........  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5162   282  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  98.2% (54/55)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_119381

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCAC	ARAPPFDYDLDVRGIHNFDH	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_5163   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  94.7% (230/243)  IGHV4-59*01  50   .....TCC...A....C.........................G...............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S  
                    Query_5163   94   GGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAGCC  183
V  94.7% (230/243)  IGHV4-59*01  140  .........A.................G.............................................A.............A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D  
                    Query_5163   184  AGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGACG  273
V  94.7% (230/243)  IGHV4-59*01  230  .................AG...........................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD3-22*01  6    ---------------------------------------------------------------------------........-------  13

                                      T------------------------>                                  
                                      V  R  G  I  H  N  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5163   274  TAAGGGGAATCCACAACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
J  97.8% (44/45)    IGHJ4*02     4    ---------------........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_119380

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            336     1e-94
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GAATGAACCC	TGAGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATGAACCCTGAGTAC	ARGMNPEY	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  E  A  S  G  F  T  F  S  G  H  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5164  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAGTGGCCACTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-7*01  47   .....................C......................A..T.T.......G................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  K  D  G  S  E  E  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_5164  91   AGTGGGTGGCCAACATAAAGAAAGATGGAAGTGAAGAATACTATGCGGACTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCC  180
V  93.2% (232/249)  IGHV3-7*01  137  ....................C.............GA.........T..........A................................A  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                     H  K  S  L  Y  R  Q  M  Y  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  G  M  N  P  E  Y  W  
                    Query_5164  181  ACAAGTCACTGTATCGGCAAATGTACAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGAGAGGAATGAACCCTGAGTACTGGG  270
V  93.2% (232/249)  IGHV3-7*01  227  .G..C..........T.......A..........................G.G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  97.6% (40/41)    IGHJ4*02    8    -------------------------------------------------------------------------------...C.......  18

                                                                   
                                     G  Q  G  T  L  V  T  V  S  S  
                    Query_5164  271  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  300
J  97.6% (40/41)    IGHJ4*02    19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_270181

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-13*01                                                                                           369     2e-104
IGHJ2*01                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-13*01	N/A	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	CCCCCTTAGGTG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCCCCCTTAGGTGACTGGTACTTCGATCTC	ARAPLGDWYFDL	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	241	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  D  M  H  W  V  R  Q  A  T  G  K  G  L  
                    Query_5165   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTCCTACGACATGCACTGGGTCCGCCAAGCTACAGGAAAAGGTCTGG  90
V  98.0% (241/246)  IGHV3-13*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  D  M  H  W  V  R  Q  A  T  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  A  T  A  G  D  T  Y  Y  P  G  S  V  K  G  R  F  T  I  S  R  E  S  A  K  
                    Query_5165   91   AGTGGGTCTCAGCTATTGCTACTGCTGGTGACACATACTATCCAGGCTCCGTGAAGGGCCGATTCACCATCTCCAGAGAAAGTGCCAAGA  180
V  98.0% (241/246)  IGHV3-13*01  137  ..................G..............................................................A........  226
                                      E  W  V  S  A  I  G  T  A  G  D  T  Y  Y  P  G  S  V  K  G  R  F  T  I  S  R  E  N  A  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  S  L  Y  L  Q  I  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R  A  P  L  G  D  W  Y  F  
                    Query_5165   181  ACTCCTTGTATCTTCAAATAAACAGCCTGAGAGCCGGGGACACGGCTGTGTATTACTGTGCAAGAGCCCCCTTAGGTGACTGGTACTTCG  270
V  98.0% (241/246)  IGHV3-13*01  227  ...................G..............................................------------------------  292
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R                          
J  98.0% (50/51)    IGHJ2*01     3    ------------------------------------------------------------------------------............  14

                                      ---->                                  
                                      D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_5165   271  ATCTCTGGGGCCGTGGCACCCTGGTCACAGTCTCCTCAG  309
J  98.0% (50/51)    IGHJ2*01     15   ............................T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_113986

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           325     3e-91
IGHD6-19*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCCACGTCTGTGT	CAGTGACTGG	CAGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATTCCACGTCTGTGTCAGTGACTGGCAGGTTTGACTAC	VRDSTSVSVTGRFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  G  N  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5166   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGTTTCAGCGGAAATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-33*01  47   ....................................CC.....TA.CT...G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  F  D  G  S  N  K  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_5166   91   AGTGGGTGGCAGTTATATGGTTTGATGGAAGTAATAAATACTATGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  91.6% (229/250)  IGHV3-33*01  137  .....................A...................................A...........................T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      N  N  A  L  Y  L  Q  M  T  S  L  R  V  E  D  T  A  F  Y  Y  C  V  R  D  S  T  S  V  S  V  
                    Query_5166   181  ACAATGCGCTTTATCTTCAAATGACCAGCCTGAGAGTCGAGGACACGGCTTTTTACTACTGTGTGAGAGATTCCACGTCTGTGTCAGTGA  270
V  91.6% (229/250)  IGHV3-33*01  227  .G..CA....G.....G.......A...........C.............G.G..T.......C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD6-19*01  9    ------------------------------------------------------------------------------------.....G  14

                                      ---------------->                                  
                                      T  G  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5166   271  CTGGCAGGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  90.0% (9/10)     IGHD6-19*01  15   ....-----------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     6    --------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_270187

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           363     2e-102
IGHD1-26*01                                                                                           21.8    0.044 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GA	GGTGTAGTGGGAGC	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTAC	ARGGVVGAPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	261	29	0	90


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  T  A  G  G  S  F  S  S  Y
                    Query_5167   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGACCGCTGGAGGTAGTTTCAGCAGCTA  90
V  90.0% (261/290)  IGHV1-69*06  6    ..................G...........................................A.G.TT.......C.CC...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  M  R  Q  A  P  G  Q  G  L  E  W  M  G  A  I  M  P  L  Y  G  I  G  N  Y  A  Q
                    Query_5167   91   TGCTATCAGTTGGATGCGACAGGCCCCTGGGCAAGGGCTTGAGTGGATGGGAGCAATCATGCCTCTATATGGCATAGGAAACTACGCACA  180
V  90.0% (261/290)  IGHV1-69*06  96   .........C...G................A......................GG.....C...A.C.T...T.C..C............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  K  V  T  I  T  A  D  T  S  T  R  T  A  Y  M  E  L  S  G  L  R  S  A  D  T  A
                    Query_5167   181  GAAGTTCCAGGGCAAAGTCACGATTACCGCGGACACATCCACGAGGACAGCCTACATGGAGTTGAGTGGCCTGAGATCTGCGGACACGGC  270
V  90.0% (261/290)  IGHV1-69*06  186  ..............G....................A.........C...............C....CA............A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  G  G  V  V  G  A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_5167   271  CATGTATTATTGTGCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTACTGGGGCCAGGGAACTCTGGTCACCGTCTCCCCAG  353
V  90.0% (261/290)  IGHV1-69*06  276  .G.......C..........---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  92.9% (13/14)    IGHD1-26*01  1    ----------------------...A..........-----------------------------------------------  14
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------------........................C...............T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_113980

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           403     1e-114
IGHD3-3*01                                                                                            46.8    1e-09 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGCAGCCCTCCGGAG	ACGATTTTTGGAGTGGTTATTATA	GGTTTGG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGCAGCCCTCCGGAGACGATTTTTGGAGTGGTTATTATAGGTTTGGTGACTAT	ARLQPSGDDFWSGYYRFGDY	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	273	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  Y 
                    Query_5168   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCGACTAT  91
V  94.8% (273/288)  IGHV1-18*01  7    ....................................................................................AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  V  Y  S  D  T  T  N  H  A  Q 
                    Query_5168   92   GGGATCAACTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGCTGGATCAGCGTTTACAGTGATACCACAAACCATGCACAG  181
V  94.8% (273/288)  IGHV1-18*01  97   ..T....G...........................G..............A..........C.....A..G..A.......T........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  N  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_5168   182  AAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAACACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (273/288)  IGHV1-18*01  187  ...........................................G................C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------CDR3-IMGT------------------------>                  
                                       I  Y  Y  C  A  R  L  Q  P  S  G  D  D  F  W  S  G  Y  Y  R  F  G  D  Y  W  G  Q  G  T  L 
                    Query_5168   272  ATATATTACTGTGCGAGACTGCAGCCCTCCGGAGACGATTTTTGGAGTGGTTATTATAGGTTTGGTGACTATTGGGGCCAGGGAACCCTG  361
V  94.8% (273/288)  IGHV1-18*01  277  G.G...............------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (24/24)   IGHD3-3*01   6    ----------------------------------........................--------------------------------  29
J  97.6% (40/41)    IGHJ4*02     8    -----------------------------------------------------------------......C..................  32

                                                      
                                       V  T  V  S  S  
                    Query_5168   362  GTCACCGTCTCCTCAG  377
J  97.6% (40/41)    IGHJ4*02     33   ................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_113983

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           336     1e-94
IGHD3-22*01                                                                                           18.0    0.59 
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAT	TATTTCCATGATAGGCGTGGT	G	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCATTATTTCCATGATAGGCGTGGTGACTGGTACGTCGATCTC	ARDHYFHDRRGDWYVDL	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  H  D  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5169   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTCACGACTACATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-53*01  47   ............................................AG.A..........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  H  R  D  G  K  T  D  Y  A  V  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_5169   91   AGTGGGTCTCAGTTATTCATAGGGATGGAAAAACAGACTATGCAGTCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.5% (231/247)  IGHV3-53*01  137  .................T....C.G...T.GC...T....C....A............................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------------CDR3-IMGT-
                                      N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  H  Y  F  H  D  R  R  
                    Query_5169   181  ACACTGTGTATCTTCAAATGAACAGCCTGCGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGACCATTATTTCCATGATAGGCGTG  270
V  93.5% (231/247)  IGHV3-53*01  227  ....GC.......................A.....................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  81.0% (17/21)    IGHD3-22*01  2    -----------------------------------------------------------------------....A.T.......TA...  20

                                      ------------------->                                  
                                      G  D  W  Y  V  D  L  W  G  R  G  A  L  V  T  V  S  S  
                    Query_5169   271  GTGACTGGTACGTCGATCTCTGGGGCCGTGGCGCCCTGGTCACTGTCTCCTCAG  324
D  81.0% (17/21)    IGHD3-22*01  21   ..----------------------------------------------------  22
J  96.1% (49/51)    IGHJ2*01     3    ---........T....................A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_119386

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           338     4e-95
IGHD3-22*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGCGA	AATTCC	GATGGTAGTGGCTAT	CCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGCGAAATTCCGATGGTAGTGGCTATCCCCTTGACTAC	GRNSDGSGYPLDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	4	2	0	66.7
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  Y  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5170   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATATACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.5% (232/248)  IGHV3-33*01  47   .................................TC..........G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  A  V  I  W  N  D  G  S  N  K  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5170   91   CGTGGGTGGCAGTTATATGGAATGATGGAAGTAATAAATACTATGCAGAGTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.5% (232/248)  IGHV3-33*01  137  A...................T............................C........................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  I  L  Y  L  Q  M  N  R  L  G  A  E  D  T  A  I  Y  Y  C  G  R  N  S  D  G  S  G  Y  
                    Query_5170   181  AGAACATTCTGTATCTGCAAATGAATCGACTGGGAGCCGAGGACACGGCTATTTATTACTGTGGGCGAAATTCCGATGGTAGTGGCTATC  270
V  93.5% (232/248)  IGHV3-33*01  227  ......CG.................CA.C...A.................G.G..........C.A..----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD3-22*01  11   --------------------------------------------------------------------------...A.......T...-  25

                                      ---------->                                  
                                      P  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_5170   271  CCCTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ4*02     7    ---.....................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_119389

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*11                                                                                           399     3e-113
IGHD3-3*01                                                                                            18.0    0.70  
IGHJ5*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*11	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATCACGGCCCGCTAGTGGTACG	GGTTATTAT	GGACCG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATCACGGCCCGCTAGTGGTACGGGTTATTATGGACCGAACTGCTTCGACCCC	ARGSRPASGTGYYGPNCFDP	291	350	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	16	8	0	66.7
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	275	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  A  S  G  D  S  F  S 
                    Query_5171   3    CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGGCTTCAGGGGACTCCTTCAGT  92
V  93.2% (275/295)  IGHV1-69*11  1    ...........G.......................................................A......T..A.G.A.......C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       G  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  I  P  I  L  G  S  A  N  H 
                    Query_5171   93   GGGTATGGAATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGTGATCATCCCTATCCTTGGTTCAGCAAACCAC  182
V  93.2% (275/295)  IGHV1-69*11  91   A.C....CT....G...........................................AG...................A........T..  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  K  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_5171   183  GCACAGAAGTTCAAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGTTGAGCAGCCTGAGATCTGAAGAC  272
V  93.2% (275/295)  IGHV1-69*11  181  ............C.....................................................C...................G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  M  Y  Y  C  A  R  G  S  R  P  A  S  G  T  G  Y  Y  G  P  N  C  F  D  P  W  G  Q  G 
                    Query_5171   273  ACGGCCATGTATTACTGTGCGAGAGGATCACGGCCCGCTAGTGGTACGGGTTATTATGGACCGAACTGCTTCGACCCCTGGGGCCAGGGA  362
V  93.2% (275/295)  IGHV1-69*11  271  ......G..................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (9/9)     IGHD3-3*01   20   ------------------------------------------------.........---------------------------------  28
J  98.0% (48/49)    IGHJ5*02     3    ---------------------------------------------------------------.....G.....................  29

                                                            
                                       T  L  V  T  V  S  S  
                    Query_5171   363  ACCCTGGTCACCGTCTCCTCAG  384
J  98.0% (48/49)    IGHJ5*02     30   ......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_270188

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           405     4e-115
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	TCCTCC	GGGTATATCAGGGGCTGG	GACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGATCCTCCGGGTATATCAGGGGCTGGGACGACTACAACGCTATGGACGTC	AGSSGYIRGWDDYNAMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  F
                    Query_5172   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGTAGTTT  90
V  94.8% (274/289)  IGHV1-69*01  6    ....................................................................................C..C.A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  A  L  F  G  I  P  N  Y  A  Q
                    Query_5172   91   TGCTATCAGCTGGGTGCGACAGGCCCCAGGACAAGGGCTTGAGTGGATGGGAGGGATCATCGCTCTCTTTGGAATACCAAACTACGCACA  180
V  94.8% (274/289)  IGHV1-69*01  96   ...........................T.................................C..A.......T.C.G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        G  F  Q  G  R  V  M  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_5172   181  GGGGTTCCAGGGCAGAGTCATGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTAAGATCTGAGGACACGGC  270
V  94.8% (274/289)  IGHV1-69*01  186  .AA.................C...................................................G.................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  G  S  S  G  Y  I  R  G  W  D  D  Y  N  A  M  D  V  W  G  Q  G  T  T  V  T
                    Query_5172   271  CGTCTATTACTGTGCGGGATCCTCCGGGTATATCAGGGGCTGGGACGACTACAACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCAC  360
V  94.8% (274/289)  IGHV1-69*01  276  ...G............A..-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  88.9% (16/18)    IGHD6-19*01  1    -------------------------.......G...T......-----------------------------------------------  18
J  96.2% (51/53)    IGHJ6*02     10   -----------------------------------------------.....T...G.................................  52

                                                
                                        V  S  S 
                    Query_5172   361  CGTCTCCTCA  370
J  96.2% (51/53)    IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_113989

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           420     7e-120
IGHD1-26*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	GGG	GGTCTAGTGGAAGGTACTAC	CTCCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTAC	ARGGLVEGTTSFFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_5173   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCAACCTA  90
V  96.5% (279/289)  IGHV5-51*03  6    ..................................................................................A.C.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  F  G  W  V  R  Q  I  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_5173   91   CTGGTTCGGCTGGGTGCGCCAGATACCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.5% (279/289)  IGHV5-51*03  96   ....A...................G..........................G......................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  P  D  T  A
                    Query_5173   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCCCGGACACCGC  270
V  96.5% (279/289)  IGHV5-51*03  186  ............................................G..................................T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  A  R  G  G  L  V  E  G  T  T  S  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5173   271  CATTTATTACTGTGCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCGTC  360
V  96.5% (279/289)  IGHV5-51*03  276  ...G............A..-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  85.0% (17/20)    IGHD1-26*01  1    ----------------------...A......G..C......------------------------------------------------  20
J  97.7% (43/44)    IGHJ4*02     5    ------------------------------------------------.......................................C..  46

                                        
                                        
                    Query_5173   361  AG  362
J  97.7% (43/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_113988

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD2-8*02                                                                                            12.2    31   
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGA	GTACTG	CCACCGAGTCTAGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGAGTACTGCCACCGAGTCTAGGTGGTTCGACCCC	ARDQSTATESRWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5174   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   .......................................................G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  H  S  G  T  T  Q  Y  N  P  S  L  K  S  R  V  T  I  S  M  D  T  S  K  K 
                    Query_5174   91   TGGATTGGTTACATCCATCACAGTGGGACCACCCAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATGGACACGTCCAAGAAG  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G..T...T..T.........G....A.C....................................G.A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  S  T  A  T  E  S  R 
                    Query_5174   181  CAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTTTATTATTGTGCGAGAGATCAGAGTACTGCCACCGAGTCTAGG  270
V  93.5% (229/245)  IGHV4-59*01  229  .............A......C...........T..............G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-8*02   9    ----------------------------------------------------------------------......--------------  14

                                      ----------->                                  
                                       W  F  D  P  W  G  H  G  T  L  V  A  V  S  S  
                    Query_5174   271  TGGTTCGACCCCTGGGGCCACGGAACCCTGGTCGCCGTCTCCTCAG  316
J  95.7% (44/46)    IGHJ5*02     6    ....................G............A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_70599

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            386     1e-109
IGHD6-13*01                                                                                           21.8    0.043 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCGAGGG	GCAGCAGTTGGTAC	CATT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCGAGGGGCAGCAGTTGGTACCATTCTACGTTGACTCC	ARFEGQQLVPFYVDS	264	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	77	27	24	3	0	88.9
FR2-IMGT	78	128	51	50	1	0	98
CDR2-IMGT	129	149	21	20	1	0	95.2
FR3-IMGT	150	263	114	110	4	0	96.5
CDR3-IMGT (germline)	264	269	6	6	0	0	100
Total	N/A	N/A	269	258	11	0	95.9


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  I  S  G  G  S  I  S  S  S  N  W  W  S  W  V  
                    Query_5175   1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCACCTGCGCTATCTCTGGTGGATCCATTAGTAGTAGTAACTGGTGGAGTTGGGTCC  90
V  95.9% (258/269)  IGHV4-4*02   26   ................T...........................G..........C.....C..C.........................  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  H  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  
                    Query_5175   91   GCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGTGAAATCCATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCA  180
V  95.9% (258/269)  IGHV4-4*02   116  ..................................G......T................................................  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  I  S  V  D  K  S  K  N  H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  
                    Query_5175   181  CCATATCAGTAGACAAGTCTAAGAACCACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAT  270
V  95.9% (258/269)  IGHV4-4*02   206  ...................C........G...........G....G...........................................-  294
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  

                                      -----------CDR3-IMGT----------------->                                  
                                      F  E  G  Q  Q  L  V  P  F  Y  V  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5175   271  TCGAGGGGCAGCAGTTGGTACCATTCTACGTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
D  92.9% (13/14)    IGHD6-13*01  8    -------.......C......---------------------------------------------------  21
J  95.7% (45/47)    IGHJ4*02     2    -------------------------....T......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_70598

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           339     2e-95
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GTC	TACAACTGG	CGGGAGGGGGCGTTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTCTACAACTGGCGGGAGGGGGCGTTCACTAC	GLQLAGGGVHY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5176   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGCAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.7% (230/243)  IGHV3-33*01  47   ...........................................T.GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  S  N  K  H  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_5176   91   AGTGGGTGGCAATTATATGGTATGATGGAAGTAACAAACACTATGCAGACTCCGTCCAGGGCCGATTCACCATATCCAGAGACAATTCCA  180
V  94.7% (230/243)  IGHV3-33*01  137  ...........G......................T...T................GA................C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  G  L  Q  L  A  G  G  G  V  
                    Query_5176   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCTGTATATTACTGTGGTCTACAACTGGCGGGAGGGGGCGTTC  270
V  94.7% (230/243)  IGHV3-33*01  227  ........C...........................C...G...........G..........---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (9/9)     IGHD1-1*01   3    ------------------------------------------------------------------.........---------------  11

                                      ---->                                  
                                      H  Y  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_5176   271  ACTACAGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.4% (38/39)    IGHJ4*02     10   .....T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_344468

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD4-4*01                                                                                            16.1    2.2   
IGHJ3*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-4*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGGAAGACA	GACTACAG	C	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGGAAGACAGACTACAGCGATGCTTTTGATATG	AWKTDYSDAFDM	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	238	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5177   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.7% (238/246)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  Y  T  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  M  S 
                    Query_5177   91   CTGGAGTGGATTGGCTACATCTCTTACACTGGGAGAACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACATGTCT  180
V  96.7% (238/246)  IGHV4-31*03  139  ..............G.......A.....G......C.................................................C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  W  K  T  D  Y  S  D  A 
                    Query_5177   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACGGCCGCGGACACGGCCGTCTATTACTGTGCGTGGAAGACAGACTACAGCGATGCT  270
V  96.7% (238/246)  IGHV4-31*03  229  ...................A...............T.................G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (8/8)     IGHD4-4*01   2    ---------------------------------------------------------------------------........-------  9
J  98.0% (48/49)    IGHJ3*02     2    ------------------------------------------------------------------------------------......  7

                                      -------->                                  
                                       F  D  M  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5177   271  TTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  313
J  98.0% (48/49)    IGHJ3*02     8    ........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_344469

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           299     3e-83
IGHD5-12*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCATCC	GTGGATATGGTGG	TCGTGGGACGCAAGTTGT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCATCCGTGGATATGGTGGTCGTGGGACGCAAGTTGTCTACGGAATGGACGTC	ARGIRGYGGRGTQVVYGMDV	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	100	14	0	87.7
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	219	28	0	88.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  T  S  A  G  Y  Y  W  S  W  I  R  Q  H  S  G  K  G  
                    Query_5178   4    CCCTGAGACTCTCCTGCACTGTCTCTGGCGGCTCCATCACTAGCGCTGGTTACTACTGGAGCTGGATCCGCCAGCACTCAGGGAAGGGTC  93
V  88.7% (219/247)  IGHV4-31*03  50   .....TCC...A................T..........GC..T.G...............................C..........C.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  R  I  G  Y  I  Y  Y  S  G  S  T  S  Y  N  P  S  L  Q  S  R  I  T  I  S  Q  D  K  S  
                    Query_5178   94   TGGAGCGGATTGGATACATATATTACAGTGGGAGCACCTCCTACAACCCGTCCCTCCAGAGTCGAATTACCATATCACAAGACAAGTCTA  183
V  88.7% (219/247)  IGHV4-31*03  140  .....T.......G.....C...................A................A........G...........GT.....C.....  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  N  L  S  P  V  T  A  A  G  P  A  V  Y  D  *  A  R  G  I  R  G  Y  G  G  
                    Query_5178   184  AGAACCAGTTCTCCCTGAACCTGAGCCCTGTGACGGCCGCGGGCCCGGCCGTATATGACTGAGCGAGGGGCATCCGTGGATATGGTGGTC  273
V  88.7% (219/247)  IGHV4-31*03  230  ...................G......T.......T.......A.A.......G...T....T.....-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  92.3% (12/13)    IGHD5-12*01  1    ---------------------------------------------------------------------------........A....--  13

                                      R3-IMGT------------------------>                                 
                                      R  G  T  Q  V  V  Y  G  M  D  V  W  G  H  G  T  R  V  T  V  S  S 
                    Query_5178   274  GTGGGACGCAAGTTGTCTACGGAATGGACGTCTGGGGCCACGGGACCAGGGTCACCGTCTCCTCA  338
J  93.9% (46/49)    IGHJ6*02     14   ----------------......T.................A.......C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_70593

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           355     4e-100
IGHD3-16*01                                                                                           18.0    0.65  
IGHJ3*01                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	285	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	70	4	0	94.6
CDR1-IMGT	78	101	24	17	7	0	70.8
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	284	114	96	12	6	84.2
CDR3-IMGT (germline)	285	290	6	6	0	0	100
Total	N/A	N/A	293	262	25	6	89.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P  
                    Query_5179   4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCC  93
V  89.4% (262/293)  IGHV5-51*03  2    ..G........................................................T.....A....T..........GC..TA..A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      R  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  
                    Query_5179   94   GTTATTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACA  183
V  89.4% (262/293)  IGHV5-51*03  92   .C..C........C.......................................................G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  A  F  E  G  Q  V  T  I  S  V  E  K  S  I        A  Y  L  Q  W  R  R  L  K  A  S  D  
                    Query_5179   184  GTCCGGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGCCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACA  267
V  89.4% (262/293)  IGHV5-51*03  182  .C...T.....C.A...................C...C........CAGCACC.................C..C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S  
                    Query_5179   268  CTGCCATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCTT  357
V  89.4% (262/293)  IGHV5-51*03  272  .C.....G........T......-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  91.7% (11/12)    IGHD3-16*01  18   ------------------------........T...------------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    -------------------------------------------......T......G.................A...............  47

                                         
                                      S  
                    Query_5179   358  CAG  360
J  94.0% (47/50)    IGHJ3*01     48   ...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_70592

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           321     7e-90
IGHD3-3*01                                                                                            18.0    0.61 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CGCGGCCTGCCACATATGAGTCTGATGGAAGTGCTA	ATTACGATT	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCGCGGCCTGCCACATATGAGTCTGATGGAAGTGCTAATTACGATTCTGACTAC	AKARPATYESDGSANYDSDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	25	4	0	86.2
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  F  T  F  R  S  Y  A  L  T  W  V  R  Q  P  P  G  K  G  L  
                    Query_5180   1    GGTCCCTGAGACTCTCCTGTGAAGGCAGTGGATTCACCTTTAGAAGCTATGCCTTGACCTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  91.2% (227/249)  IGHV3-23*01  47   .....................C..C.TC...............C.........A...G.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  G  G  S  G  N  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5180   91   AGTGGGTCTCAAGTATTGGTGGTAGTGGCAATAATACATACTATGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAATTCCA  180
V  91.2% (227/249)  IGHV3-23*01  137  ...........GC....A..........TGG..GC........C....................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  H  L  Q  M  N  N  L  R  V  E  D  T  A  V  Y  Y  C  A  K  A  R  P  A  T  Y  E  
                    Query_5180   181  AGAACACGCTGCATCTCCAAATGAACAACCTGAGAGTCGAGGACACGGCCGTATATTACTGTGCGAAAGCGCGGCCTGCCACATATGAGT  270
V  91.2% (227/249)  IGHV3-23*01  227  ...........T....G..........G........C................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      R3-IMGT------------------------>                                  
                                      S  D  G  S  A  N  Y  D  S  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_5180   271  CTGATGGAAGTGCTAATTACGATTCTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  336
D  100.0% (9/9)     IGHD3-3*01   3    ---------------.........------------------------------------------  11
J  97.6% (40/41)    IGHJ4*02     8    -------------------------...................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_70591

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           361     5e-102
IGHD3-10*01                                                                                           52.6    2e-11 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAATAAGTGGCTCAG	ATTACTATGGTTCGGGGAGTTATTATA	TTCGACCCTCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAATAAGTGGCTCAGATTACTATGGTTCGGGGAGTTATTATATTCGACCCTCATACTACTTTGACTCC	AKISGSDYYGSGSYYIRPSYYFDS	244	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	247	4	4	0	0	100
Total	N/A	N/A	247	239	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_5181   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAATAGTTATTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.8% (239/247)  IGHV4-39*01  49   ..............................................G......C....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  T  S 
                    Query_5181   91   CTGGAGTGGATTGCGAGTATCTATTATAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCTGTAGACACGTCC  180
V  96.8% (239/247)  IGHV4-39*01  139  .............G....................G...................................C......C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  G  V  Y  Y  C  A  K  I  S  G  S  D  Y  Y 
                    Query_5181   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGGTGTCTATTACTGTGCGAAAATAAGTGGCTCAGATTACTAT  270
V  96.8% (239/247)  IGHV4-39*01  229  .................................................C...G.............-----------------------  295
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (27/27)   IGHD3-10*01  3    ----------------------------------------------------------------------------------........  10

                                      -----CDR3-IMGT------------------------------>                                  
                                       G  S  G  S  Y  Y  I  R  P  S  Y  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5181   271  GGTTCGGGGAGTTATTATATTCGACCCTCATACTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  349
D  100.0% (27/27)   IGHD3-10*01  11   ...................------------------------------------------------------------  29
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------............A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_70590

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            363     1e-102
IGHD3-16*01                                                                                           50.7    9e-11 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAAGG	ATTATGATTACGTTTGGGGGAGTTAT	TCTCTCGAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAAGGATTATGATTACGTTTGGGGGAGTTATTCTCTCGAGTAC	ARDKDYDYVWGSYSLEY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  N  M  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5182   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTTAATATGTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-7*01   47   ........................C.................G..GC...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5182   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAACACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (241/250)  IGHV3-7*01   137  ......................................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  K  D  Y  D  Y  V  
                    Query_5182   181  GGAACTCTCTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTGTATTACTGTGCGAGAGACAAGGATTATGATTACGTTT  270
V  96.4% (241/250)  IGHV3-7*01   227  A......A................................G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (26/26)   IGHD3-16*01  3    ---------------------------------------------------------------------------...............  17

                                      GT-------------------->                                  
                                      W  G  S  Y  S  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5182   271  GGGGGAGTTATTCTCTCGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (26/26)   IGHD3-16*01  18   ...........----------------------------------------------  28
J  100.0% (37/37)   IGHJ4*02     12   --------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_70597

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           336     1e-94
IGHD3-3*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGACATCCTT	TTACGATTT	N/A	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGACATCCTTTTACGATTTCTTCGACTTC	ARLTSFYDFFDF	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  V  S  S  G  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G 
                    Query_5183   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCGTCAGCAGTGGCAGTTACTACTGGAACTGGATCCGGCAGCCCCCCGGGAAGGGA  90
V  93.2% (232/249)  IGHV4-61*01  49   ..................A............................T.............G..................A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  R  T  N  N  N  P  S  L  K  N  R  V  T  I  S  V  D  T  S 
                    Query_5183   91   CTGGAGTGGATTGGGAATATCTATTACAGTGGGCGCACCAATAACAACCCGTCCCTCAAGAATCGAGTCACCATATCAGTAGACACGTCC  180
V  93.2% (232/249)  IGHV4-61*01  139  ...............T.................A.......CT.......C..........G............................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  H  Q  F  S  L  K  L  N  S  V  T  A  S  D  T  A  I  Y  Y  C  A  R  L  T  S  F  Y  D  F 
                    Query_5183   181  AAGCACCAGTTCTCCCTGAAGCTGAATTCTGTGACCGCGTCGGACACGGCCATTTATTACTGTGCGAGACTGACATCCTTTTACGATTTC  270
V  93.2% (232/249)  IGHV4-61*01  229  ...A.....................GC...........TG...........G.G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-3*01   4    --------------------------------------------------------------------------------.........-  12
J  86.4% (38/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  F  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_5183   271  TTCGACTTCTGGGGCCAGGGAATTTTAGTCACCGTCTCCTCAG  313
J  86.4% (38/44)    IGHJ4*02     6    ..T....A..............CCC.G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_70596

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_5184   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.9% (229/244)  IGHV4-59*01  49   .......................................AG....T..............A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5184   91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.9% (229/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_5184   181  CAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.9% (229/244)  IGHV4-59*01  229  ...................G...........................G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_5184   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_344462

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           288     5e-80
IGHD2-15*01                                                                                           14.1    8.6  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGGGGATTTCGAGAA	GGTGGTA	AATCGGTCAGT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGGGGATTTCGAGAAGGTGGTAAATCGGTCAGTTTTGCCTAC	ARDGGFREGGKSVSFAY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	42	9	0	82.4
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  S  T  Y  T  M  N  W  L  R  Q  A  P  G  K  E  P  
                    Query_5185   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGGTTCAGTACTTATACTATGAACTGGCTTCGCCAGGCTCCAGGGAAGGAGCCGC  90
V  86.8% (217/250)  IGHV3-21*01  47   ....................................CC.......GC....GC.........G.C...................G..T.G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  *  V  A  S  V  S  G  D  G  T  Y  I  Y  Y  A  E  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5185   91   AATGAGTCGCATCTGTGAGTGGAGATGGAACCTACATATACTACGCAGAATCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  86.8% (217/250)  IGHV3-21*01  137  .G..G...T....CA.T...A.TAG.A.T.GT.................C...G...................................A  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      E  N  S  V  F  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  G  G  F  R  E  G  
                    Query_5185   181  AGAACTCAGTGTTTCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCTGTCTATTATTGTGCGAGAGACGGGGGATTTCGAGAAGGTG  270
V  86.8% (217/250)  IGHV3-21*01  227  ........C...A.......................C...............G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-15*01  14   --------------------------------------------------------------------------------------....  17

                                      GT-------------------->                                  
                                      G  K  S  V  S  F  A  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_5185   271  GTAAATCGGTCAGTTTTGCCTACTGGGGCCAGGGAACCCTTGTCATCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD2-15*01  18   ...------------------------------------------------------  20
J  93.0% (40/43)    IGHJ4*02     6    --------------....A.....................G....C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_70594

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            338     5e-95
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGATTTTGGG	TGATAGTAGTGGTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCCGATTTTGGGTGATAGTAGTGGTTATTACTTTGTCTCA	VRDPILGDSSGYYFVS	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  G  D  Y  G  F  M  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  P  
                    Query_5186   1    GGTCCCTGAGACTCTCCTGTGGAGACTATGGATTCATGTTTAGTAGCTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  93.2% (233/250)  IGHV3-7*01   47   .....................C..C..C........CC....................C............................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_5186   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAAAATTATGTGGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  93.2% (233/250)  IGHV3-7*01   137  ......................................T.C..............................A..................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  V  R  D  P  I  L  G  D  S  
                    Query_5186   181  AGAACACTCTATATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTATATTATTGTGTGAGAGATCCGATTTTGGGTGATAGTA  270
V  93.2% (233/250)  IGHV3-7*01   227  .....T.A..G.........................C...............G.....C....C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (16/16)   IGHD3-22*01  10   ----------------------------------------------------------------------------------........  17

                                      T------------------>                                  
                                      S  G  Y  Y  F  V  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5186   271  GTGGTTATTACTTTGTCTCATGGGGGCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (16/16)   IGHD3-22*01  18   ........----------------------------------------------  25
J  91.3% (42/46)    IGHJ4*02     3    --------.......A..AC.....C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_272963

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            353     1e-99
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTTCAAGGACAC	ATTACAATGGTTCGGGGAG	CCCCCCC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGAGTTCAAGGACACATTACAATGGTTCGGGGAGCCCCCCCACTTCGGTTTGGACGTC	VREFKDTLQWFGEPPHFGLDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5187   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGACAAGCTCCAGGGAAGGGCCTGG  90
V  95.2% (238/250)  IGHV3-9*01   47   ........................C..........................................G......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  K  N  S  T  I  G  Y  A  D  S  V  K  G  R  F  T  I  P  R  D  N  A  
                    Query_5187   91   AGTGGGTCTCAGGTATTAGCTGGAAAAATTCTACCATAGGATATGCGGACTCTGTGAAGGGCCGATTCACCATCCCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-9*01   137  ...................T.....T.G.GG..G......C.................................T...............  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  V  R  E  F  K  D  T  L  Q  
                    Query_5187   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGTAAGAGAGTTCAAGGACACATTACAAT  270
V  95.2% (238/250)  IGHV3-9*01   227  ...............................................................C..A...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  94.7% (18/19)    IGHD3-10*01  3    ----------------------------------------------------------------------------------.....T..  10

                                      DR3-IMGT-------------------------->                                 
                                      W  F  G  E  P  P  H  F  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5187   271  GGTTCGGGGAGCCCCCCCACTTCGGTTTGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTCCTCA  338
D  94.7% (18/19)    IGHD3-10*01  11   ...........---------------------------------------------------------  21
J  94.0% (47/50)    IGHJ6*02     13   ------------------...A....A................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_272962

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     5e-89
IGHD6-19*01                                                                                           12.2    30   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGACGGGT	TGGCTG	CCC	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGACGGGTTGGCTGCCCGACGAC	ARGTGWLPDD	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  G  Y  Y  C  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_5188   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCAGTGGTTACTACTGCAACTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAGT  93
V  91.8% (223/243)  IGHV4-59*01  50   .....TCC...A..................G..........A..........G.G..................A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  H  I  Y  N  T  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  M  D  T  S  K  N  
                    Query_5188   94   GGATTGGACATATCTACAACACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATGGACACGTCCAAGAACC  183
V  91.8% (223/243)  IGHV4-59*01  140  .......GT.......TT...G.....G...........................................G.A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------CDR3-IMGT--------->    
                                      Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  T  G  W  L  P  D  D  W  
                    Query_5188   184  AGTTCTCCTTGAACCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGACGGGTTGGCTGCCCGACGACTGGG  273
V  91.8% (223/243)  IGHV4-59*01  230  ........C....G....G............................................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD6-19*01  12   -----------------------------------------------------------------------......-------------  17
J  97.5% (39/40)    IGHJ4*02     9    --------------------------------------------------------------------------------...T......  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_5188   274  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  97.5% (39/40)    IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_272960

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           311     5e-87
IGHD2-15*01                                                                                           31.5    6e-05
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTCGGGGCTGGCCCAAGG	ATTGTAGCACTGGTAGCTGCTACTC	GGGGGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTCGGGGCTGGCCCAAGGATTGTAGCACTGGTAGCTGCTACTCGGGGGGTTTTGATATC	ARDSRGWPKDCSTGSCYSGGFDI	244	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	41	10	0	80.4
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	225	26	0	89.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  V  R  P  H  P  E  K  G 
                    Query_5189   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGCGGTTACTACTGGAGCTGGGTCCGCCCGCACCCAGAAAAAGGG  90
V  89.6% (225/251)  IGHV4-31*01  49   ...............................................T..................A......A........GG..G..C  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  V  G  Y  I  Y  Y  S  G  R  T  Y  Y  N  P  S  L  Q  S  L  V  T  K  S  I  N  T  A 
                    Query_5189   91   CTGGGATGGGTTGGGTATATCTATTACAGTGGGAGGACCTACTACAATCCGTCCCTCCAGAGTCTTGTCACCAAGTCAATAAACACGGCT  180
V  89.6% (225/251)  IGHV4-31*01  139  ....AG...A.......C.................C...........C.........A.......A..T....TA...G..G.....T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  K  P  F  F  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  R  G  W  P  K 
                    Query_5189   181  AAGAAACCGTTCTTCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGATTCTCGGGGCTGGCCCAAG  270
V  89.6% (225/251)  IGHV4-31*01  229  .....C.A.....C............C..........................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      ---CDR3-IMGT----------------------------->                                  
                                       D  C  S  T  G  S  C  Y  S  G  G  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_5189   271  GATTGTAGCACTGGTAGCTGCTACTCGGGGGGTTTTGATATCTGGGGCCAGGGGACAGTGGTCACCGTCTCTTCAG  346
D  88.0% (22/25)    IGHD2-15*01  6    -.......TGG...............--------------------------------------------------  30
J  95.5% (42/44)    IGHJ3*02     7    --------------------------------..................A......A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_272967

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD5-12*01                                                                                           14.1    8.7  
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	CTTAGACTCCCGTGT	TGGCTAC	CATCGC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGACTTAGACTCCCGTGTTGGCTACCATCGCGCTGATTACTTCCACCAC	AKDLDSRVGYHRADYFHH	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  M  F  D  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5190   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCATGTTTGACAACTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-23*01  47   .....................C..............CC...AG..G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  V  S  G  G  G  F  S  S  Y  Y  A  D  S  V  R  G  R  F  T  A  S  R  D  S  S  
                    Query_5190   91   AGTGGGTCTCAGGTGTTAGTGGGGGTGGTTTTAGTTCATACTACGCAGACTCCGTGAGGGGCCGGTTCACCGCCTCAAGAGACAGTTCCA  180
V  90.4% (226/250)  IGHV3-23*01  137  ............C.A.......TA.....GG...CA.....................A.............AT...C.......A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  L  D  S  R  V  G  
                    Query_5190   181  AGAACACACTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAGGACTTAGACTCCCGTGTTGGCT  270
V  90.4% (226/250)  IGHV3-23*01  227  .......G........G...................................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD5-12*01  11   -------------------------------------------------------------------------------------.....  15

                                      IMGT--------------------->                                  
                                      Y  H  R  A  D  Y  F  H  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5190   271  ACCATCGCGCTGATTACTTCCACCACTGGGGCCAGGGCACCCTGGTCACTGTCTCCTCAG  330
D  100.0% (7/7)     IGHD5-12*01  16   ..----------------------------------------------------------  17
J  94.2% (49/52)    IGHJ1*01     1    --------.....A........G..........................C..........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_272966

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           329     3e-92
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACGATGC	CTACGGT	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATGACGATGCCTACGGTCTTGACTAC	VRDDDAYGLDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  W  M  H  W  V  R  Q  A  P  G  K  G  P  
                    Query_5191   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGACACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCCGG  90
V  92.0% (230/250)  IGHV3-74*01  47   ..............................................CT.......................................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  C  V  A  R  I  K  S  D  G  S  Y  R  D  Y  A  D  F  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5191   91   TGTGCGTCGCACGTATCAAGAGTGATGGGAGTTACAGAGACTACGCGGACTTCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.0% (230/250)  IGHV3-74*01  137  ....G...T.......T..T............AG..C.AG...........C......................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  I  L  Y  L  Q  M  N  S  L  S  A  D  D  T  A  V  Y  Y  C  V  R  D  D  D  A  Y  G  L  
                    Query_5191   181  AGAACATTCTGTATTTGCAAATGAACAGTCTGAGTGCCGACGACACGGCTGTCTATTACTGTGTAAGAGATGACGATGCCTACGGTCTTG  270
V  92.0% (230/250)  IGHV3-74*01  227  ......CG......C...................A.....G...........G..........C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD4-17*01  4    -------------------------------------------------------------------------------.......----  10
J  95.2% (40/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  L  S  S  
                    Query_5191   271  ACTACTGGGGCCAGGGGACCCTGGTCACCCTCTCCTCAG  309
J  95.2% (40/42)    IGHJ4*02     10   ................A............G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_272965

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           382     3e-108
IGHD4-17*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGGAAT	TACGGTGACTAC	GGACTAACGT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCGGAATTACGGTGACTACGGACTAACGTACTTCTTTGACTAC	AKDRNYGDYGLTYFFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5192   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-30*18  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5192   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  98.8% (247/250)  IGHV3-30*18  137  .............................................C............................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  R  N  Y  G  D  Y  
                    Query_5192   181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTCTGTATTACTGTGCGAAAGACCGGAATTACGGTGACTACG  270
V  98.8% (247/250)  IGHV3-30*18  227  ...A..............................................G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD4-17*01  5    -----------------------------------------------------------------------------............-  16

                                      GT-------------------->                                  
                                      G  L  T  Y  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5192   271  GACTAACGTACTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  97.9% (47/48)    IGHJ4*02     1    ---------...A............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_272964

Length=414
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           438     5e-125
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGCCTACTTTCTTAGTTGGGGTTACTCTGGTA	GTATAACAGCAGCTGG	CGAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTAC	ARHAYFLSWGYSGSITAAGEIDY	289	357	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	113	1	0	99.1
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	288	8	0	97.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  A 
                    Query_5193   1    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTGCC  90
V  97.3% (288/296)  IGHV5-51*01  1    .....G........G..........................C........................................G....A..  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y 
                    Query_5193   91   ACCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATAC  180
V  97.3% (288/296)  IGHV5-51*01  91   .G...............................................................................A........  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D 
                    Query_5193   181  AGCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGAC  270
V  97.3% (288/296)  IGHV5-51*01  181  ..............................................................................A...........  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-----------------------------CDR3-IMGT----------------------------->   
                                       T  A  M  Y  Y  C  A  R  H  A  Y  F  L  S  W  G  Y  S  G  S  I  T  A  A  G  E  I  D  Y  W 
                    Query_5193   271  ACCGCCATGTATTACTGTGCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTACTGG  360
V  97.3% (288/296)  IGHV5-51*01  271  ..........................----------------------------------------------------------------  296
                                       T  A  M  Y  Y  C  A  R                                                                   
D  93.8% (15/16)    IGHD6-13*01  3    ----------------------------------------------------------.....G..........----------------  18
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------...........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_5193   361  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  391
J  100.0% (42/42)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40604112


Query= Query_272969

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-20*01                                                                                           367     6e-104
IGHD6-13*01                                                                                           27.6    8e-04 
IGHJ6*02                                                                                              112     6e-29 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-20*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GG	ATAGCAGCAGCTGCTAC	CAACTCCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGATAGCAGCAGCTGCTACCAACTCCCTCTACTACTACTACGGTATGGACGTC	ARGIAAAATNSLYYYYGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  D  Y  A  M  M  W  V  R  Q  A  P  G  K  G  L  
                    Query_5194   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGAGGATTATGCCATGATGTGGGTCCGCCAAGCTCCCGGGAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-20*01  47   ...........................................T.......G.....GC.................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  N  G  G  S  A  G  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5194   91   AGTGGGTCTCTGGTATTAATTGGAATGGTGGTAGCGCAGGTTATGGAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (242/249)  IGHV3-20*01  137  ...................................A.........C............................................  226
                                      E  W  V  S  G  I  N  W  N  G  G  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R  G  I  A  A  A  A  T  
                    Query_5194   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCCTTGTATCACTGTGCGAGAGGGATAGCAGCAGCTGCTACCA  270
V  97.2% (242/249)  IGHV3-20*01  227  .....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R                       
D  94.1% (16/17)    IGHD6-13*01  5    -----------------------------------------------------------------------.............G...--  21

                                      R3-IMGT------------------------>                                 
                                      N  S  L  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5194   271  ACTCCCTCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
J  100.0% (58/58)   IGHJ6*02     5    -------..........................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_213747

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           307     1e-85
IGHD2-2*01                                                                                            12.2    34   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	GGACGAGG	GGACATTGCGGTAGT	GTTACCTGTTTTAATGGGAAATATGACA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGACGAGGGGACATTGCGGTAGTGTTACCTGTTTTAATGGGAAATATGACATTGACTAC	VRTRGHCGSVTCFNGKYDIDY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	221	25	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  D  F  T  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_5195   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAGTGACTTTACTATGCACTGGGTCCGCCAGGTCCCAGGGAAGGGACTGG  90
V  89.8% (221/246)  IGHV3-64*05  47   ............................................AG..A.G.....................CT................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  A  I  S  S  D  G  G  A  T  T  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5195   91   AATTTGTTTCAGCTATCAGTAGTGATGGGGGTGCCACAACCTACGGAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  89.8% (221/246)  IGHV3-64*05  137  ...A............T......A........AG....TA.....C............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  F  L  H  L  S  S  L  R  P  E  D  T  S  I  Y  F  C  V  R  T  R  G  H  C  G  S  
                    Query_5195   181  AGAACACACTGTTTCTTCATTTGAGCAGTCTGAGACCTGAGGACACATCTATTTATTTCTGTGTGAGGACGAGGGGACATTGCGGTAGTG  270
V  89.8% (221/246)  IGHV3-64*05  227  .......G....A.G....AA..............G..........GG..G.G....A........------------------------  292
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V                          
D  80.0% (12/15)    IGHD2-2*01   2    --------------------------------------------------------------------------...T....TA.....-  16

                                      DR3-IMGT-------------------------->                                  
                                      V  T  C  F  N  G  K  Y  D  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5195   271  TTACCTGTTTTAATGGGAAATATGACATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_121163

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD2-15*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TTACAAATCTGGGGATA	CTACTCC	TTTCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATTACAAATCTGGGGATACTACTCCTTTCCACTTTGACTCC	AKDYKSGDTTPFHFDS	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	24	17	4	3	70.8
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	250	229	18	3	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  A  M  S  W  V  R  Q  A  P  G  Q  G  L  
                    Query_5196   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGCAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-23*01  47   ...............................................T..........C.....................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  I  I  T     S  G  G  E  T  Y  Y  T  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_5196   91   AGTGGGTCTCAATTATTACT---AGTGGTGGTGAGACATACTACACAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  177
V  91.6% (229/250)  IGHV3-23*01  137  ...........GC.....G.GGT.........AGC.........G..........................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      I  N  A  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  Y  K  S  G  D  T  
                    Query_5196   178  TAAACGCGCTGTCTCTCCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATTACAAATCTGGGGATACTA  267
V  91.6% (229/250)  IGHV3-23*01  227  AG...A......A...G...................................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD2-15*01  25   ---------------------------------------------------------------------------------------...  27

                                      T------------------>                                
                                      T  P  F  H  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5196   268  CTCCTTTCCACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
D  100.0% (7/7)     IGHD2-15*01  28   ....------------------------------------------------  31
J  97.7% (42/43)    IGHJ4*02     4    ---------.........A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_121160

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-24*01                                                                                           406     1e-115
IGHD6-19*01                                                                                           18.0    0.65  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-24*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCAA	AAATA	GGCTGGTAC	GCTAGAC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAATAGGCTGGTACGCTAGACACTTTGACAAC	AKIGWYARHFDN	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	71	4	0	94.7
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	293	4	4	0	0	100
Total	N/A	N/A	292	276	16	0	94.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  V  S  G  Y  T  L  S 
                    Query_5197   2    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGTTTCCGGATACACCCTCAGT  91
V  94.5% (276/292)  IGHV1-24*01  1    ...........G..A........G...............................A................................C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       E  L  S  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  I  Y 
                    Query_5197   92   GAATTATCCATACACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGACGGTGAAACAATCTAC  181
V  94.5% (276/292)  IGHV1-24*01  91   ...........G..............................................................T...............  180
                                       E  L  S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  I  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  K  G  R  V  T  M  T  D  D  T  S  T  D  A  A  Y  M  E  L  S  S  L  R  S  D  D 
                    Query_5197   182  GCTCAGAAGTTCAAGGGCAGAGTCACCATGACCGACGACACGTCTACAGACGCAGCCTACATGGAACTGAGCAGCCTGAGATCTGACGAC  271
V  94.5% (276/292)  IGHV1-24*01  181  ..A.........C......................G.....A.........A.............G....................G...  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  E  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  V  Y  F  C  A  K  I  G  W  Y  A  R  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5197   272  ACGGCCGTTTATTTCTGTGCAAAAATAGGCTGGTACGCTAGACACTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  94.5% (276/292)  IGHV1-24*01  271  ........G....A........------------------------------------------------------------------  292
                                       T  A  V  Y  Y  C  A                                                                    
D  100.0% (9/9)     IGHD6-19*01  13   ---------------------------.........----------------------------------------------------  21
J  97.8% (44/45)    IGHJ4*02     4    -------------------------------------------........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_121166

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           399     3e-113
IGHD1-26*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	GGTATAGT	ACAGGGCCTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAGGTATAGTACAGGGCCTCTACTACTTTGACTAC	ARRGIVQGLYYFDY	274	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	60	56	55	1	0	98.2
CDR1-IMGT	61	84	24	21	3	0	87.5
FR2-IMGT	85	135	51	50	1	0	98
CDR2-IMGT	136	159	24	21	3	0	87.5
FR3-IMGT	160	273	114	112	2	0	98.2
CDR3-IMGT (germline)	274	279	6	6	0	0	100
Total	N/A	N/A	275	265	10	0	96.4


Alignments

                                      <-----------------------FR1-IMGT-----------------------><-------CDR1-IMGT------><---------
                                         G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  N  W  I  G  W  
                    Query_5198   5    CTGGTGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAGCAATTGGATCGGCTGGG  94
V  96.4% (265/275)  IGHV5-51*03  20   ....A...........................................................C.........T.C.............  109
                                         G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W  I  G  W  

                                      -----------FR2-IMGT---------------------><-------CDR2-IMGT------><------------------------
                                      V  R  Q  M  P  G  K  G  L  E  W  V  G  I  I  N  P  G  D  S  E  T  R  Y  S  P  S  F  Q  G  
                    Query_5198   95   TGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGGTGGGGATCATCAACCCTGGTGACTCTGAGACCAGATACAGTCCGTCCTTCCAAGGCC  184
V  96.4% (265/275)  IGHV5-51*03  110  ................................A...........T.T..............T...........C................  199
                                      V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S  F  Q  G  

                                      ----------------------------FR3-IMGT----------------------------------------------------><
                                      Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  S  A  M  Y  Y  C  
                    Query_5198   185  AGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACAGCGCCATGTATTACTGTG  274
V  96.4% (265/275)  IGHV5-51*03  200  ........................................................................C.................  289
                                      Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M  Y  Y  C  

                                      ----------------CDR3-IMGT--------------->                                  
                                      A  R  R  G  I  V  Q  G  L  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5198   275  CGAGACGAGGTATAGTACAGGGCCTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  349
V  96.4% (265/275)  IGHV5-51*03  290  .....----------------------------------------------------------------------  294
                                      A  R                                                                       
D  100.0% (8/8)     IGHD1-26*01  1    --------........-----------------------------------------------------------  8
J  100.0% (48/48)   IGHJ4*02     1    ---------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_121167

Length=410
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           397     8e-113
IGHD4-17*01                                                                                           18.0    0.70  
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCCGACCGAAGG	GGTGACTAC	GACGAGGGGGA	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCGACCGAAGGGGTGACTACGACGAGGGGGAATTACAACTATTACTACGGTATGGACGTC	ARGPTEGVTTTRGNYNYYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  T  F  R  N  Y
                    Query_5199   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTAAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAGGAATTA  90
V  93.8% (272/290)  IGHV1-69*01  6    ..................G.............................G.........................G.........C.GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  R  G  I  I  P  V  V  G  T  P  N  Y  A  Q
                    Query_5199   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGAGAGGGATCATCCCTGTCGTTGGTACACCAAATTACGCACA  180
V  93.8% (272/290)  IGHV1-69*01  96   .................................................G..............A..T........G....C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  N  I  D  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_5199   181  GAAATTCCAGGGCAGAGTCACAATTACCGCGGACGAATCCACCAACATAGACTACATGGAGTTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  93.8% (272/290)  IGHV1-69*01  186  ...G.................G....................G.G..C..C..........C............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  Y  C  A  R  G  P  T  E  G  V  T  T  T  R  G  N  Y  N  Y  Y  Y  G  M  D  V  W  G  Q
                    Query_5199   271  CGTGTATTACTGTGCGAGAGGCCCGACCGAAGGGGTGACTACGACGAGGGGGAATTACAACTATTACTACGGTATGGACGTCTGGGGCCA  360
V  93.8% (272/290)  IGHV1-69*01  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (9/9)     IGHD4-17*01  8    ---------------------------------.........------------------------------------------------  16
J  93.5% (58/62)    IGHJ6*02     1    -----------------------------------------------------.....T....C..........................  37

                                                               
                                        G  T  T  V  I  V  S  S 
                    Query_5199   361  AGGGACCACGGTCATCGTCTCTTCA  385
J  93.5% (58/62)    IGHJ6*02     38   ..............C......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40183344


Query= Query_121164

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           363     1e-102
IGHD1-1*01                                                                                            12.2    32    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTAC	AEEKRRVPRGTFHY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5200   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-23*01  47   ................................T.........G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  S  T  I  S  K  D  N  S  
                    Query_5200   91   AGTGGGTCTCAGCCATTAGTGGTGGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTCCACCATCTCCAAAGACAATTCGA  180
V  96.4% (241/250)  IGHV3-23*01  137  .............T.........A..........................................T...........G.........C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  
                    Query_5200   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGG  270
V  96.4% (241/250)  IGHV3-23*01  227  .................................................................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------------------------......------------  17

                                      ------------->                                  
                                      G  T  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5200   271  GAACCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (43/44)    IGHJ4*02     5    ----....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_129315

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           336     1e-94
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	CGGACGTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGACGTAACTTTAACTAC	ASGRNFNY	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5201   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACCTTCAGTACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-21*01  47   ................................T............G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  T  N  N  S  Y  V  S  Y  A  G  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_5201   91   AGTGGGTCTCATCCATTAGTACTAATAATTCTTACGTATCCTACGCGGGCTCAGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.5% (231/247)  IGHV3-21*01  137  .....................G..G..G.AG....A...A......A.A........A................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      K  T  S  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  S  G  R  N  F  N  Y  W  
                    Query_5201   181  AGACCTCCCTGTATCTGCAAATGAACACCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGCGGACGTAACTTTAACTACTGGG  270
V  93.5% (231/247)  IGHV3-21*01  227  ...A...A...................G........................G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  95.3% (41/43)    IGHJ4*02     4    ---------------------------------------------------------------------------.....G.........  18

                                                                  
                                      G  L  G  T  L  V  T  V  S  S
                    Query_5201   271  GCCTGGGAACCCTGGTCACCGTCTCCTC  298
J  95.3% (41/43)    IGHJ4*02     19   ...A........................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_129314

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           402     3e-114
IGHD6-25*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAGG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTC	ARQSSAGRTRYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	274	17	0	94.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  D  Y
                    Query_5202   1    GCAGCTGGTGCAGTCTGGGGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATTCGACTTTACCGACTA  90
V  94.2% (274/291)  IGHV5-51*01  6    ..................A.................C.............................T.......A.AG.......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_5202   91   CTGGATCGTCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACGAGATACAGTCC  180
V  94.2% (274/291)  IGHV5-51*01  96   ........G..............T......................................................C........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_5202   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  94.2% (274/291)  IGHV5-51*01  186  .............................C.............A.......................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  F  C  A  R  Q  S  S  A  G  R  T  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_5202   271  CATGTATTTTTGTGCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTC  360
V  94.2% (274/291)  IGHV5-51*01  276  ........AC...........---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------............................................C..  61

                                       
                                       
                    Query_5202   361  A  361
J  97.9% (47/48)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_129317

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           335     4e-94
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	N/A	GGGCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGGGCCCCTACTACGGTCTGGACGTC	AKEGPYYGLDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5203   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACATTCAGTTTCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-30*18  47   ...............................A.....C......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  L  K  D  G  T  T  K  Y  Y  A  D  S  V  K  G  R  F  T  T  S  R  D  N  P  
                    Query_5203   91   AGTGGGTGGCAGTTATACTAAAGGATGGAACTACTAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCACTTCCAGAGACAATCCCA  180
V  92.8% (232/250)  IGHV3-30*18  137  .................TC.T.T.......G..A......................................TC............T...  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  E  M  S  G  L  R  A  E  D  T  A  M  Y  Y  C  A  K  E  G  P  Y  Y  G  L  
                    Query_5203   181  AGAACACGCTGTATCTGGAAATGAGCGGCCTGAGAGCCGAGGACACGGCTATGTATTACTGTGCGAAAGAGGGCCCCTACTACGGTCTGG  270
V  92.8% (232/250)  IGHV3-30*18  227  .................C......A.A..........T............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
J  98.1% (51/52)    IGHJ6*02     11   ----------------------------------------------------------------------------..........A...  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5203   271  ACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  308
J  98.1% (51/52)    IGHJ6*02     25   ......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_121169

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           341     5e-96
IGHD6-13*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGATGGGGG	AGCAGCAGCTGGT	CTGCCCCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATCGATGGGGGAGCAGCAGCTGGTCTGCCCCTCACTTTGACTGC	TRDRWGSSSWSAPHFDC	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	22	8	0	73.3
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	237	19	0	92.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5204   1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCAACTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.6% (237/256)  IGHV3-49*04  47   ....................................C.....................................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  V  R  S  Y  T  H  G  G  T  T  A  Y  A  A  A  V  K  G  R  F  T  I  S  R  D  
                    Query_5204   91   AGTGGGTTGGCTTCGTGAGAAGTTATACCCATGGTGGGACAACAGCTTACGCCGCGGCTGTGAAAGGCAGATTCACCATCTCAAGGGATG  180
V  92.6% (237/256)  IGHV3-49*04  137  .......A..T...A.T.....CA.AG.TT...............AA.........T............................A....  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  T  S  I  A  Y  L  E  M  D  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  D  R  W  G  S  
                    Query_5204   181  ATTCCACAAGCATCGCCTATCTGGAAATGGACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGCACTAGAGATCGATGGGGGAGCA  270
V  92.6% (237/256)  IGHV3-49*04  227  ......A................C.....A.....................................T........--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (13/13)   IGHD6-13*01  7    --------------------------------------------------------------------------------------....  10

                                      DR3-IMGT-------------------->                                  
                                      S  S  W  S  A  P  H  F  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5204   271  GCAGCTGGTCTGCCCCTCACTTTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD6-13*01  11   .........------------------------------------------------------  19
J  97.8% (44/45)    IGHJ4*02     4    ------------------.........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_275602

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CG	ATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5205   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_5205   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_5205   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCGATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.1% (16/17)    IGHD2-21*02  6    ------------------------------------------------------------------------.........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5205   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_275601

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           357     1e-100
IGHD4-17*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TGTGAGGA	TGACTACGGTG	CCCCCGACCGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATGTGAGGATGACTACGGTGCCCCCGACCGATTTGACTAC	AKCEDDYGAPDRFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5206   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTACGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  96.0% (238/248)  IGHV3-23*01  47   .................................................T.......G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  G  A  G  T  Y  Y  T  D  S  V  K  G  R  F  A  I  S  R  D  N  S  
                    Query_5206   91   AGTGGGTCTCAACTATCAGTGGTAGTGGTGCTGGCACATACTACACAGACTCCGTGAAGGGCCGGTTCGCCATCTCCAGAGACAATTCCA  180
V  96.0% (238/248)  IGHV3-23*01  137  ...........G....T.............G.A...........G.......................A.....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  C  E  D  D  Y  G  A  
                    Query_5206   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAATGTGAGGATGACTACGGTGCCC  270
V  96.0% (238/248)  IGHV3-23*01  227  ........C...........................................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD4-17*01  1    ----------------------------------------------------------------------------...........---  11

                                      ---------------->                                  
                                      P  D  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5206   271  CCGACCGATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (43/43)   IGHJ4*02     6    --------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_275600

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           307     1e-85
IGHD3-16*02                                                                                           43.0    2e-08
IGHJ3*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	TGCTGGGCTCCACCC	TTATGATTCCATTTCGGGGAGTTATCGTTAT	TCGCCGTGGA	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATGCTGGGCTCCACCCTTATGATTCCATTTCGGGGAGTTATCGTTATTCGCCGTGGACTTTTGATATC	ANAGLHPYDSISGSYRYSPWTFDI	240	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	20	4	0	83.3
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	125	24	21	3	0	87.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	230	213	17	0	92.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  S  F  R  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 
                    Query_5207   15   TGTGCAGCCTCTGGTTTCTCCTTTAGGAGTTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGGTATC  104
V  92.6% (213/230)  IGHV3-23*01  64   ..............A...A.......C..C...........C...........................................C...T  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  N  G  G  S  T  Y  Y  G  D  S  V  R  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_5207   105  AGTGGTAATGGTGGTAGCACCTACTACGGAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCGAAGAACACACTCTATCTG  194
V  92.6% (213/230)  IGHV3-23*01  154  .......G............A.......C...........A......G.......................C........G..G......  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-------------------------------CDR3-IMGT----
                                       Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  A  N  A  G  L  H  P  Y  D  S  I  S  G  S  Y 
                    Query_5207   195  CAAATGAACAGCCTGAGAGTCGATGACACGGCCGTATATTACTGTGCGAATGCTGGGCTCCACCCTTATGATTCCATTTCGGGGAGTTAT  284
V  92.6% (213/230)  IGHV3-23*01  244  ...................C...G..........................----------------------------------------  293
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  90.3% (28/31)    IGHD3-16*02  4    -----------------------------------------------------------------........A.G...G..........  28

                                      -------------------------->                                 
                                       R  Y  S  P  W  T  F  D  I  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_5207   285  CGTTATTCGCCGTGGACTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCA  344
D  90.3% (28/31)    IGHD3-16*02  29   ......------------------------------------------------------  34
J  100.0% (44/44)   IGHJ3*02     6    ----------------............................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_157210

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           344     6e-97
IGHD2-15*01                                                                                           12.2    31   
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	GTTGG	TACTCC	CCCC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGTTGGTACTCCCCCCCTACGGTATGGACGTC	TLVLPPYGMDV	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	22	8	0	73.3
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	250	2	2	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  A  V  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_5208   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTGTGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  94.0% (235/250)  IGHV3-73*01  47   .........A...........................................A....................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  S  S  T  A  N  K  F  A  T  A  Y  A  A  S  L  K  G  R  F  T  I  S  R  L  
                    Query_5208   91   AGTGGGTTGGCCGTATTTCCAGCACAGCTAATAAGTTCGCGACAGCATATGCTGCGTCGCTGAAAGGCAGATTCACCATCTCCAGACTTG  180
V  94.0% (235/250)  IGHV3-73*01  137  .................AGA....A......C.GT.A......................G..........G...............GA..  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  L  V  L  P  P  Y  
                    Query_5208   181  ATTCAAAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTATTGTACGTTGGTACTCCCCCCCTACG  270
V  94.0% (235/250)  IGHV3-73*01  227  ................................................................C.....--------------------  296
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (6/6)     IGHD2-15*01  26   ---------------------------------------------------------------------------......---------  31
J  100.0% (49/49)   IGHJ6*02     14   -------------------------------------------------------------------------------------.....  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5208   271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (49/49)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_337637

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           307     1e-85
IGHD6-19*01                                                                                           12.2    30   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTGGC	GGCTGG	CTTAC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTGGCGGCTGGCTTACGGACGTC	TRGGGWLTDV	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	220	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  K 
                    Query_5209   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTGGTTTCTACTGGAGCTGGATTCGGCAGCCCCCAGGGAAGGGACTGAAG  90
V  90.2% (220/244)  IGHV4-59*01  49   .............................T............A...A...............C........................G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  H  Y  S  G  H  T  N  Y  N  P  S  L  R  S  R  V  I  I  S  L  D  T  S  N  N 
                    Query_5209   91   TGGATTGGGAATATCCACTACAGTGGGCACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCATCATATCGCTGGACACGTCCAACAAC  180
V  90.2% (220/244)  IGHV4-59*01  139  .........T.....T.T.........AG.......................A...........C......AG.A...........G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  I  S  L  K  V  N  S  G  T  A  A  D  T  A  L  Y  Y  C  T  R  G  G  G  W  L  T  D  V  W 
                    Query_5209   181  CAGATCTCCCTGAAGGTGAACTCTGGGACCGCTGCGGACACGGCCCTCTATTATTGTACGAGAGGTGGCGGCTGGCTTACGGACGTCTGG  270
V  90.2% (220/244)  IGHV4-59*01  229  ...T...........C...G.....T...................G.G.....C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  13   ---------------------------------------------------------------------......---------------  18
J  100.0% (40/40)   IGHJ6*02     23   --------------------------------------------------------------------------------..........  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_5209   271  GGCCAAGGGACCACGGTCACCGTCTCCTCA  300
J  100.0% (40/40)   IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_83741

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           291     6e-81
IGHD3-10*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGCTGGAGGGGGC	TTCGGGACGTTACTATAA	TGGACGGCGGGGGATTCC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGCTGGAGGGGGCTTCGGGACGTTACTATAATGGACGGCGGGGGATTCCGGACGTC	ARLEGASGRYYNGRRGIPDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	216	30	0	87.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  N  S  H  Y  W  V  W  I  R  Q  S  P  V  K  G 
                    Query_5210   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCACCAATAGTCACTACTGGGTCTGGATCCGCCAGTCCCCAGTGAAGGGG  90
V  87.8% (216/246)  IGHV4-39*01  49   ...........................................GT.G....T.........G.............C......G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  V  F  Y  S  G  T  T  S  Y  N  P  S  L  R  G  R  V  T  I  S  V  G  P  S 
                    Query_5210   91   CTGGAGTGGATTGGGACCGTCTTTTATAGCGGGACCACCTCCTACAACCCGTCCCTCAGGGGTCGAGTCACCATCTCCGTTGGCCCGTCC  180
V  87.8% (216/246)  IGHV4-39*01  139  ................GTA...A......T....G.....A.................A.A.............A.....A.A.A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       N  N  Q  F  S  L  E  V  R  S  V  T  A  A  D  T  S  I  Y  Y  C  A  R  L  E  G  A  S  G  R 
                    Query_5210   181  AACAACCAATTCTCCCTGGAGGTGAGGTCTGTGACCGCCGCGGACACCTCTATTTATTACTGTGCGCGGCTGGAGGGGGCTTCGGGACGT  270
V  87.8% (216/246)  IGHV4-39*01  229  ..G.....G.........A..C....C..............A.....GG..G.G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  83.3% (15/18)    IGHD3-10*01  13   --------------------------------------------------------------------------------......GA..  22

                                      DR3-IMGT------------------------>                                 
                                       Y  Y  N  G  R  R  G  I  P  D  V  W  G  Q  G  T  T  V  T  V  A  S 
                    Query_5210   271  TACTATAATGGACGGCGGGGGATTCCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCGCCTCA  336
D  83.3% (15/18)    IGHD3-10*01  23   ..T.....----------------------------------------------------------  30
J  97.5% (39/40)    IGHJ6*02     23   --------------------------..................................T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_83742

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           353     9e-100
IGHD6-19*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGGA	AGCAGTGG	N/A	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGGAAGCAGTGGCTATTACCACGGTATGGACGTC	ARSGSSGYYHGMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5211   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGGAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (237/248)  IGHV3-33*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  T  N  E  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  E  N  S  
                    Query_5211   91   AGTGGGTGGCCGTTATATGGTATGATGGAACTAATGAACATTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGAGAATTCCA  180
V  95.6% (237/248)  IGHV3-33*01  137  ..........A...................G....A..T.C....C....................................C.......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  S  G  S  S  G  Y  Y  
                    Query_5211   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGATCGGGAAGCAGTGGCTATTACC  270
V  95.6% (237/248)  IGHV3-33*01  227  ....................................C...............G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  7    --------------------------------------------------------------------------........--------  14
J  96.4% (53/55)    IGHJ6*02     8    ----------------------------------------------------------------------------------...C...T  15

                                      ------------->                                 
                                      H  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5211   271  ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  96.4% (53/55)    IGHJ6*02     16   ...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_337634

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-22*01                                                                                           25.7    0.003
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGC	AGTAGTGGTTATT	GG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTCGACCCC	ARGGSSGYWWFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5212   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTATTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*01  49   ...............................G..........A....C.......G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  F  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5212   91   TGGATTGGGTTTATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGGGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.9% (234/244)  IGHV4-59*01  139  ..........A.........C.................................A...................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  S  S  G  Y  W  W  F 
                    Query_5212   181  CAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTC  270
V  95.9% (234/244)  IGHV4-59*01  229  ...............C...G.................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD3-22*01  14   ---------------------------------------------------------------------.............--------  26
J  93.5% (43/46)    IGHJ5*02     6    ------------------------------------------------------------------------------------......  11

                                      ----->                                  
                                       D  P  W  G  Q  A  I  P  V  T  V  S  S  
                    Query_5212   271  GACCCCTGGGGCCAGGCAATCCCGGTCACCGTCTCCTCAG  310
J  93.5% (43/46)    IGHJ5*02     12   ................G..C..T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_83744

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           335     4e-94
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GCCGGGG	GGCTGG	G	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGGCCGGGGGGCTGGGAACTGGTTCGACCCC	AGGRGAGNWFDP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  Y  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5213   1    ACCCTGTCCCTCACCTGCACTGTCTATGGTGGCTCCATCAGTAGTGGGGCTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  92.8% (232/250)  IGHV4-31*03  49   .........................C...............C.....T.G............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       Q  E  W  I  G  Y  I  Y  Y  G  E  N  T  Q  Y  N  P  S  L  K  S  R  L  T  I  S  G  D  T  S 
                    Query_5213   91   CAGGAGTGGATTGGATACATCTATTACGGTGAGAACACCCAGTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGGAGACACGTCT  180
V  92.8% (232/250)  IGHV4-31*03  139  .T............G............A...G..G....T.C........................G............T..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       T  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  G  R  G  A  G  N  W 
                    Query_5213   181  ACGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGGGAGGCCGGGGGGCTGGGAACTGG  270
V  92.8% (232/250)  IGHV4-31*03  229  .A.................A.................................G............A...--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------......-------  18
J  95.9% (47/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  S  V  T  S  
                    Query_5213   271  TTCGACCCCTGGGGCCAGGGAACCCTGGTCTCCGTCACCTCAG  313
J  95.9% (47/49)    IGHJ5*02     9    ..............................A.....T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_83745

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         294     6e-82
IGHD4-17*01                                                                                           21.8    0.042
IGHJ3*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD4-17*01	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGGGGA	ACTTCGGTGACTAC	GGGAGG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATTTGGGGAACTTCGGTGACTACGGGAGGGATGCTTTTGATATA	PEIWGTSVTTGGMLLI	245	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	244	114	100	13	1	87.7
CDR3-IMGT (germline)	245	252	8	8	0	0	100
Total	N/A	N/A	250	221	28	1	88.4


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  V  T  S  G  A  Y  C  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_5214     4    CCCTGAGACTCTCCTGCGCCGTCTCTGGTGGCTCCGTCACGAGTGGTGCTTACTGCTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  88.4% (221/250)  IGHV4-30-4*01  50   .....TCC...A.....A.T...............A...GC.......A.....A...................................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  C  S  I  G  G  T  Y  Y  N   R  P  S  R  V  E  L  S  F  H  L  T  R  P 
                    Query_5214     94   TGGAGTGGATTGGGTACATCTGTTCCATTGGGGGCACCTACTACAA-TCGTCCCTCAAGAGTCGAATTATCATTTCATTTGACACGTCCA  182
V  88.4% (221/250)  IGHV4-30-4*01  140  .....................A..A..G....A.............CC.................G...C...A...G.A..........  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                         R  T  S  F  P  C  S  *  V  L  *  R  P  Q  T  R  P  Y  I  T  V  P  E  I  W  G  T  S  V  T 
                    Query_5214     183  AGAACCAGTTTTCCCTGCAGTTGAGTTCTGTGACGGCCTCAGACACGGCCGTATATTACTGTGCCAGAGATTTGGGGAACTTCGGTGACT  272
V  88.4% (221/250)  IGHV4-30-4*01  230  ..........C......A..C....C........T...G.............G.................--------------------  299
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  92.9% (13/14)    IGHD4-17*01    3    ------------------------------------------------------------------------------...A........  14

                                        GT-------------------->                                  
                                         T  G  G  M  L  L  I  Y  G  A  K  G  Q  G  S  P  S  L  Q 
                    Query_5214     273  ACGGGAGGGATGCTTTTGATATATGGGGCCAAGGGACAAGGATCACCGTCTCTTCAG  329
D  92.9% (13/14)    IGHD4-17*01    15   ..-------------------------------------------------------  16
J  93.9% (46/49)    IGHJ3*02       2    --------..............C................T.G...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_337631

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ2*01                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	TACTATAATCCTAGTGGTTATTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACTATAATCCTAGTGGTTATTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGYYGYWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	239	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_5215   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.6% (239/245)  IGHV4-59*01  49   ............................................................A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  I  S  K  N 
                    Query_5215   91   TGGATTGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGATATCTCCAAGAAC  180
V  97.6% (239/245)  IGHV4-59*01  139  ........G....................................................................C.CG.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  Y  Y 
                    Query_5215   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACTACTATAATCCTAGTGGTTATTAC  270
V  97.6% (239/245)  IGHV4-59*01  229  ...................G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (21/24)    IGHD3-22*01  5    ------------------------------------------------------------------......G..AG.............  28

                                      -------------------->                                  
                                       G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_5215   271  GGGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  325
J  100.0% (52/52)   IGHJ2*01     2    ---....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_260578

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD1-26*01                                                                                           12.2    31   
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARAKGIAVIVDAFDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_5216   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ..................A.....................G............................C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  V  S  V  D  M  S  N  N 
                    Query_5216   91   TGGATTGGATATATCTATTACAGAGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAGACATGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G..............T....G.....A......C.....CC................CA.A..........C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  K  G  I  A  V  I  V  D 
                    Query_5216   181  CGGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGTGCGAGAGCTAAGGGTATCGCTGTTATAGTAGAT  270
V  90.6% (221/244)  IGHV4-59*01  229  .A...........AG.................T.......CG.....G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------------......----  8
J  91.8% (45/49)    IGHJ3*01     2    ---------------------------------------------------------------------------------------...  4

                                      ----------->                                  
                                       A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_5216   271  GCTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  316
J  91.8% (45/49)    IGHJ3*01     5    .........G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_83748

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           327     9e-92
IGHD3-10*01                                                                                           10.3    117  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_5217   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-21*01  47   ............................................AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  T  T  S  E  F  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_5217   91   AGTGGGTCTCATCCATTAGTACTACTAGTGAGTTCATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  92.0% (229/249)  IGHV3-21*01  137  .....................G..G....AGT.A......C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  S  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_5217   181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGCGCCGAGGACACGGCTCTCTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTT  270
V  92.0% (229/249)  IGHV3-21*01  227  ............A......A..............A...............G.G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5217   271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_260576

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           372     2e-105
IGHD1-7*01                                                                                            16.1    2.5   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ACTGGAAATAC	ATAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTC	ARDRTGNTYYGLDV	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	16	8	0	66.7
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	101	13	0	88.6
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	267	29	0	90.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S 
                    Query_5218   3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTATACTTTCAGT  92
V  90.2% (267/296)  IGHV1-18*01  1    .....T...............................A.................................T........C..C..T.CC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  D  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  S  F  N  G  N  T  I  Y 
                    Query_5218   93   AATGATGGTATTAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCTCTTTCAATGGAAACACAATCTAC  182
V  90.2% (267/296)  IGHV1-18*01  91   .GCT.......C............................................A.........G...A......T.......A...T  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  L  Q  G  R  V  T  M  T  T  E  T  S  T  T  T  A  Y  M  E  L  R  S  L  T  Y  D  D 
                    Query_5218   183  GCACAGAATTTACAGGGCAGAGTTACCATGACCACAGAAACTTCTACGACCACAGCCTACATGGAGCTGAGGAGCCTGACATATGACGAC  272
V  90.2% (267/296)  IGHV1-18*01  181  ........GC.C...........C..............C..A..C....G.............................G..C.......  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  F  C  A  R  D  R  T  G  N  T  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_5218   273  ACGGCCGTGTATTTCTGTGCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  362
V  90.2% (267/296)  IGHV1-18*01  271  .............A............----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  90.9% (10/11)    IGHD1-7*01   7    ------------------------------.......C...-------------------------------------------------  17
J  95.8% (46/48)    IGHJ6*02     15   ---------------------------------------------......A....C.................................  59

                                         
                                       S 
                    Query_5218   363  TCA  365
J  95.8% (46/48)    IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_260575

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         357     1e-100
IGHD3-22*01                                                                                           48.8    3e-10 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	AC	TTACTATGATAGTAGTGGTTATTAC	CTTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACTTACTATGATAGTAGTGGTTATTACCTTAACTACTTTGACCAC	ARTYYDSSGYYLNYFDH	246	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  R  V  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_5219     4    CCCTGAGACTCTCCTGTGCTGTCTCTCGTGTCTCCATCAGAAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  96.0% (238/248)  IGHV4-30-4*01  50   .....TCC...A....CA........G...G.........C.......A.........................................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_5219     94   TGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCA  183
V  96.0% (238/248)  IGHV4-30-4*01  140  ..........................................................................................  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  Y  Y  D  S  S  G  
                    Query_5219     184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAACTTACTATGATAGTAGTGGTT  273
V  96.0% (238/248)  IGHV4-30-4*01  230  ....................................................................----------------------  297
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (25/25)   IGHD3-22*01    4    ----------------------------------------------------------------------....................  23

                                        GT-------------------->                                  
                                        Y  Y  L  N  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5219     274  ATTACCTTAACTACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (25/25)   IGHD3-22*01    24   .....----------------------------------------------------  28
J  97.9% (47/48)    IGHJ4*02       1    ---------...........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_260574

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGCCGAAATC	GTATTACGACTTTTGGA	ATCCTTATTCTCGGCTCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCGAAATCGTATTACGACTTTTGGAATCCTTATTCTCGGCTCCTTCGACCCC	ARGGRNRITTFGILILGSFDP	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_5220   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGATCATTATTGGAGCTGGATCCGCCAGTCTCCAGGGAAGGGGCTGGAA  90
V  93.1% (228/245)  IGHV4-34*01  49   ...........................................G.T.C..C..................C.C.................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_5220   91   TGGATTGGGGAGATCAACCATAGTGGAAGCACCAACTACAACCCGTCTCTCAAGAGTCGAGTCACCATATCAGCGGACACGTCTAAGAAC  180
V  93.1% (228/245)  IGHV4-34*01  139  ...........A.....T.............................C.........................TA........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  K  L  I  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  G  R  N  R  I  T  T  F 
                    Query_5220   181  CAGTTCTCCCTGAAGCTGATCTCTGTGACCGCCGCAGACACGGCTGTATATTTCTGTGCGAGAGGGGGCCGAAATCGTATTACGACTTTT  270
V  93.1% (228/245)  IGHV4-34*01  229  ...................G...............G...........G....A............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  94.1% (16/17)    IGHD3-3*01   1    ----------------------------------------------------------------------------.........T....  14

                                      MGT-------------------------->                                  
                                       G  I  L  I  L  G  S  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_5220   271  GGAATCCTTATTCTCGGCTCCTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  334
D  94.1% (16/17)    IGHD3-3*01   15   ...-------------------------------------------------------------  17
J  97.7% (42/43)    IGHJ5*02     9    ---------------------.........................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_260573

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           416     2e-118
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	CCTTGAACATCCA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCTTGAACATCCATGATGCTTTTGATATC	ARALNIHDAFDI	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  T  Y
                    Query_5221   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGTAAGGCTTCTGGAGGCACCTTCAGCACCTA  90
V  95.9% (278/290)  IGHV1-69*06  6    ..................G.........................................C.........................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  L  N  Y  T  Q
                    Query_5221   91   TGCTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATATTTGGTACACTAAACTACACACA  180
V  95.9% (278/290)  IGHV1-69*06  96   ........G.........................................................C.........GC.......G....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  I  T  I  T  A  D  K  S  T  S  T  A  H  M  E  L  S  S  L  K  S  D  D  T  A
                    Query_5221   181  GAAGTTCCAGGGCAGAATCACGATTACCGCGGACAAATCCACGAGCACAGCCCACATGGAGCTGAGCAGCCTGAAATCTGATGACACGGC  270
V  95.9% (278/290)  IGHV1-69*06  186  ................G...................................T.....................G......G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  R  A  L  N  I  H  D  A  F  D  I  W  G  Q  G  T  M  V  T  L  S  S  
                    Query_5221   271  CGTGTATTACTGTGCGAGAGCCTTGAACATCCATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCCTCTCTTCAG  353
V  95.9% (278/290)  IGHV1-69*06  276  ....................---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
J  98.0% (49/50)    IGHJ3*02     1    ---------------------------------........................................G.........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_260572

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           419     2e-119
IGHD5-12*01                                                                                           10.3    136   
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	GTGGC	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGGCAACTACAACTACTACACTATGGACGTC	ARRGNYNYYTMDV	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	71	3	0	95.9
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	108	6	0	94.7
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	294	281	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  E  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_5222   5    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAGAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  94
V  95.6% (281/294)  IGHV5-51*01  2    ....G........G.....................A......................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  H  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  
                    Query_5222   95   GCCATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACA  184
V  95.6% (281/294)  IGHV5-51*01  92   ..T.C.......G........................................................G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  P  F  Q  G  Q  V  T  M  S  V  D  K  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_5222   185  GCCCGCCCTTCCAAGGCCAGGTCACCATGTCAGTCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  95.6% (281/294)  IGHV5-51*01  182  .....T......................C....C.......................A................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                 
                                      T  A  S  Y  Y  C  A  R  R  G  N  Y  N  Y  Y  T  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5222   275  CCGCCAGCTATTACTGTGCGAGACGTGGCAACTACAACTACTACACTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  363
V  95.6% (281/294)  IGHV5-51*01  272  ......TG................-----------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD5-12*01  10   ------------------------.....------------------------------------------------------------  14
J  94.9% (56/59)    IGHJ6*02     4    ------------------------------.....T........GG...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_116005

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            352     3e-99
IGHD3-3*01                                                                                            16.1    2.4  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAAGAGCGGTACGCATTGATACTTTT	TATTACGA	GGGGCCTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAAGAGCGGTACGCATTGATACTTTTTATTACGAGGGGCCTCCTGACTAC	ATRAVRIDTFYYEGPPDY	264	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	77	27	24	3	0	88.9
FR2-IMGT	78	128	51	47	4	0	92.2
CDR2-IMGT	129	149	21	17	4	0	81
FR3-IMGT	150	263	114	105	9	0	92.1
CDR3-IMGT (germline)	264	267	4	4	0	0	100
Total	N/A	N/A	267	246	21	0	92.1


Alignments

                                     <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                        G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  N  S  N  W  W  T  W  I  
                    Query_5223  1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGTCCATCAGTAATAGTAACTGGTGGACTTGGATTC  90
V  92.1% (246/267)  IGHV4-4*02  26   ................T......................................C........C.G..............G....G.C.  115
                                        G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                     --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                     R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  D  S  G  S  T  N  Y  N  P  S  L  M  S  R  V  
                    Query_5223  91   GCCAGCCCCCAGGAAAGGGGCTGGAGTGGATTGGGGAAATTATTGATAGTGGGAGCACCAACTACAACCCGTCCCTCATGAGTCGGGTCA  180
V  92.1% (246/267)  IGHV4-4*02  116  .............G..........................CTA.C.................................A......A....  205
                                     R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                     ----------------------FR3-IMGT----------------------------------------------------><------
                                     I  I  S  L  D  K  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  T  
                    Query_5223  181  TCATCTCACTAGACAAGTCCAAGAATCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGACAA  270
V  92.1% (246/267)  IGHV4-4*02  206  C...A...G................C..............G....G................................A........---  292
                                     T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A     

                                     ----------------CDR3-IMGT--------------------->                                  
                                     R  A  V  R  I  D  T  F  Y  Y  E  G  P  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5223  271  GAGCGGTACGCATTGATACTTTTTATTACGAGGGGCCTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  351
D  100.0% (8/8)     IGHD3-3*01  2    -----------------------........--------------------------------------------------  9
J  100.0% (41/41)   IGHJ4*02    8    ----------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_337638

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           367     6e-104
IGHD2-21*02                                                                                           18.0    0.67  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACTG	GGTGGGGACTACTAT	GGTCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTC	VRRLGGDYYGPFEF	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	67	4	0	94.4
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	46	5	0	90.2
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	105	9	0	92.1
CDR3-IMGT (germline)	291	297	7	6	1	0	85.7
Total	N/A	N/A	291	263	28	0	90.4


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  E  I  S  C  K  A  Y  G  Y  A  F  N  D  
                    Query_5224   7    TGCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCCGGGGAGTCTCTGGAGATCTCCTGTAAGGCTTATGGATACGCCTTTAACGACT  96
V  90.4% (263/291)  IGHV5-51*01  5    .........................G........................A...............G..C.......AG.....C.AG..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  H  Q  K  P  E  K  G  L  D  W  M  G  V  I  Y  P  D  D  L  D  T  T  Y  S  
                    Query_5224   97   ACTGGATCGGCTGGGTGCACCAGAAGCCCGAGAAAGGCCTGGATTGGATGGGGGTCATCTATCCTGATGACCTTGATACGACATACAGTC  186
V  90.4% (263/291)  IGHV5-51*01  95   ..................G.....T.....G............G.........A............G....TC......C.G......C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  N  T  I  Y  L  R  W  S  S  L  K  A  S  D  T  
                    Query_5224   187  CGTCCTTCCAAGGCCAGGTCACAATCTCAGTCGACAAGTCCATCAACACCATCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACACCG  276
V  90.4% (263/291)  IGHV5-51*01  185  ......................C.......C..............G....GC........A.............................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                  
                                      A  M  Y  Y  C  V  R  R  L  G  G  D  Y  Y  G  P  F  E  F  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_5224   277  CCATGTATTATTGTGTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  366
V  90.4% (263/291)  IGHV5-51*01  275  ..........C....C.....---------------------------------------------------------------------  295
                                      A  M  Y  Y  C  A  R                                                                       
D  86.7% (13/15)    IGHD2-21*02  11   --------------------------.....T....G....-------------------------------------------------  25
J  93.0% (40/43)    IGHJ4*02     6    -----------------------------------------------.....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_38333

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         333     1e-93
IGHD3-9*01                                                                                            16.1    2.4  
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAGGGGAACCAA	ATTTTGGCTGG	GGTCCTGGACCCACCCTTCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATAAGGGGAACCAAATTTTGGCTGGGGTCCTGGACCCACCCTTCTTCTACTACGGTATGGACGTC	ARDKGNQILAGVLDPPFFYYGMDV	244	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	232	19	0	92.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_5225     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGCGGCTCCATCAGCAGTGGTGATTATTACTGGAGTTGGATCCGCCAGCCCCCGGGGAAGGGC  90
V  92.4% (232/251)  IGHV4-30-4*01  49   ..................A..........T.......................C..........................A.........  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  R  G  K  T  Y  Y  N  P  S  L  K  S  R  V  Y  I  S  L  D  T  A 
                    Query_5225     91   CTGGAGTGGATTGGATACATCTATTACAGAGGCAAAACCTACTACAACCCGTCCCTCAAGAGTCGAGTTTACATATCATTAGACACGGCC  180
V  92.4% (232/251)  IGHV4-30-4*01  139  ..............G..............T..G.GC.................................AC.......G........T..  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------------
                                         K  N  Q  F  S  L  E  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  D  K  G  N  Q  I  L 
                    Query_5225     181  AAGAACCAATTCTCCCTGGAGCTGACCTCTGTGACTGCCGCAGACACGGCCGTATATTTTTGTGCCAGAGATAAGGGGAACCAAATTTTG  270
V  92.4% (232/251)  IGHV4-30-4*01  229  ........G.........A......G...........................G....AC...........-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD3-9*01     11   ------------------------------------------------------------------------------------......  16

                                        -----CDR3-IMGT------------------------------>                                 
                                         A  G  V  L  D  P  P  F  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5225     271  GCTGGGGTCCTGGACCCACCCTTCTTCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  348
D  90.9% (10/11)    IGHD3-9*01     17   A....-------------------------------------------------------------------------  21
J  100.0% (52/52)   IGHJ6*02       11   --------------------------....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_38332

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           324     8e-91
IGHD2-15*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGTC	GTGGTGGCAGCAGTTACT	ACAATA	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGTCGTGGTGGCAGCAGTTACTACAATATTGGCTAC	ARSRGGSSYYNIGY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  S  G  Y  G  M  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_5226   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCATGTTCAGTGGTTACGGCATGCAGTGGGTCCGCCAGGCCCCAGGCAAGGGGCTGG  90
V  91.9% (227/247)  IGHV3-30*03  47   ............................T.......CC......A.C..T........C..............T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  S  S  N  D  L  S  N  D  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5226   91   AGTGGGTGGCAGTTAGCTCAAATGATTTAAGTAATGACTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  91.9% (227/247)  IGHV3-30*03  137  ...............TA...T.....GG.......A.A....................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  D  T  L  Y  L  Q  M  D  S  L  T  T  E  D  T  A  V  Y  Y  C  A  R  S  R  G  G  S  S  Y  
                    Query_5226   181  AGGACACGTTGTATCTGCAAATGGACAGCCTGACAACTGAGGACACGGCTGTGTATTACTGTGCGAGGAGTCGTGGTGGCAGCAGTTACT  270
V  91.9% (227/247)  IGHV3-30*03  227  ..A.....C..............A.........G.G...............................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  83.3% (15/18)    IGHD2-15*01  12   ------------------------------------------------------------------------.......T...T.C....  29

                                      ------------->                                  
                                      Y  N  I  G  Y  W  G  Q  G  N  L  V  T  V  S  S  
                    Query_5226   271  ACAATATTGGCTACTGGGGCCAGGGAAACCTGGTCACCGTCTCCTCAG  318
J  95.2% (40/42)    IGHJ4*02     7    ------...A.................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_38330

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           324     8e-91
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	246	1	1	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_5227   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  92.6% (225/243)  IGHV4-39*01  50   .....TCC...A..................G.....T.....G.....G.........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_5227   94   TGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCCA  183
V  92.6% (225/243)  IGHV4-39*01  140  ..........................A....G.G.........CA..........C.................A................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S  
                    Query_5227   184  AGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGTT  273
V  92.6% (225/243)  IGHV4-39*01  230  ...................G....G...........................G..........---------------------------  292
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                             
D  100.0% (6/6)     IGHD3-16*01  18   -----------------------------------------------------------------......-------------------  23

                                      ------------->                                  
                                      Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5227   274  ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (48/48)   IGHJ4*02     1    ................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_38337

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            363     1e-102
IGHD3-22*01                                                                                           52.6    2e-11 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGACGGGGT	TATTACTATGATAATAGTGGTTATTACTAC	GGTCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACGGGGTTATTACTATGATAATAGTGGTTATTACTACGGTCTC	ARRRGYYYDNSGYYYGL	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  S  H  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_5228   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGTAGTCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  97.2% (239/246)  IGHV4-4*02   49   ...............................G................A.........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  N  S  K 
                    Query_5228   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAACACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAACTCCAAG  180
V  97.2% (239/246)  IGHV4-4*02   139  ...............................G...................................................G......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  R  R  G  Y  Y  Y  D  N 
                    Query_5228   181  AACCAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCCATATATTACTGTGCGAGACGACGGGGTTATTACTATGATAAT  270
V  97.2% (239/246)  IGHV4-4*02   229  .......................C........................G.G...............------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  96.7% (29/30)    IGHD3-22*01  2    ---------------------------------------------------------------------------.............G.  16

                                      -------------------->                                  
                                       S  G  Y  Y  Y  G  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5228   271  AGTGGTTATTACTACGGTCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  96.7% (29/30)    IGHD3-22*01  17   ...............----------------------------------------  31
J  100.0% (35/35)   IGHJ4*02     14   --------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_38336

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           341     5e-96
IGHD2-15*01                                                                                           10.3    120  
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	T	GCTGC	GCTGTACGAAGAGG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGCTGCGCTGTACGAAGAGGACAACTGGTTCGACCCC	AKDAALYEEDNWFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  N  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5229   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAATAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-30*18  47   ....................................C.....G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  R  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_5229   91   AGTGGGTGGCAGTTATCTCATATGATGGAAGGAAGAAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCG  180
V  93.6% (234/250)  IGHV3-30*18  137  ................A..............T..T.....C...........................................A....A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  T  V  N  L  E  M  N  S  L  R  I  E  D  T  A  V  Y  Y  C  A  K  D  A  A  L  Y  E  E  
                    Query_5229   181  AGAACACGGTGAATCTGGAAATGAATAGCCTGAGAATTGAGGACACGGCTGTTTATTACTGTGCGAAAGATGCTGCGCTGTACGAAGAGG  270
V  93.6% (234/250)  IGHV3-30*18  227  ........C..T.....C.......C.........GC...............G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD2-15*01  21   -----------------------------------------------------------------------.....--------------  25

                                      ---------------->                                
                                      D  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5229   271  ACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
J  100.0% (49/49)   IGHJ5*02     1    .................................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_229959

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5230   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (226/248)  IGHV3-21*01  47   ............................T............AG...C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  G  
                    Query_5230   91   AGTGGGTCTCATCCATCAGTAGTAGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  91.1% (226/248)  IGHV3-21*01  137  ................T........T...AGT......T.C..C..A......G..A..............................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_5230   181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  91.1% (226/248)  IGHV3-21*01  227  ....C..................AA...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5230   271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_38334

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            330     1e-92
IGHD1-1*01                                                                                            14.1    8.3  
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-1*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	CGACATGGC	TACAACT	T	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATCGACATGGCTACAACTTTGATGCTTTTGATATT	VKDRHGYNFDAFDI	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	9	2	0	81.8
CDR1-IMGT	27	50	24	24	0	0	100
FR2-IMGT	51	101	51	51	0	0	100
CDR2-IMGT	102	125	24	20	4	0	83.3
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	248	9	7	2	0	77.8
Total	N/A	N/A	233	222	11	0	95.3


Alignments

                                     <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                        T  V  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  V  
                    Query_5231  16   GTACAGTCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTGTTA  105
V  95.3% (222/233)  IGHV3-9*01  65   ..G...C...............................................................................A...  154
                                        A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  

                                     ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                     S  W  N  S  D  N  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  N  N  S  L  H  L  
                    Query_5231  106  GTTGGAACAGTGATAACATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAACAACTCCCTGCATCTGC  195
V  95.3% (222/233)  IGHV3-9*01  155  .......T....G..G.........................................................G.........T......  244
                                     S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                     -------------------------------------------><----------------CDR3-IMGT--------------->    
                                     Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  D  R  H  G  Y  N  F  D  A  F  D  I  W  
                    Query_5231  196  AAATGAACAGTCTGAGAGCTGAGGACACGGCCTTATATTACTGTGTGAAAGATCGACATGGCTACAACTTTGATGCTTTTGATATTTGGG  285
V  95.3% (222/233)  IGHV3-9*01  245  ..................................G..........CA......-------------------------------------  297
                                     Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                                      
D  100.0% (7/7)     IGHD1-1*01  3    --------------------------------------------------------------.......---------------------  9
J  98.0% (49/50)    IGHJ3*02    1    ----------------------------------------------------------------------...............C....  20

                                                                   
                                     G  Q  G  T  M  V  T  V  S  S  
                    Query_5231  286  GCCAAGGGACAATGGTCACCGTCTCTTCAG  315
J  98.0% (49/50)    IGHJ3*02    21   ..............................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_38339

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           304     1e-84
IGHD3-16*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	221	27	0	89.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_5232   4    CCCTGAGACTCTCCTGTACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  89.1% (221/248)  IGHV4-61*01  50   .....TCC...A....C.....C.................C....G.AG.T..........C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S  
                    Query_5232   94   TGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCCA  183
V  89.1% (221/248)  IGHV4-61*01  140  ...A.........GT............G......CAC..A.........................G.CA....A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y  
                    Query_5232   184  AAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTATC  273
V  89.1% (221/248)  IGHV4-61*01  230  .G................A.................................G...............----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-16*02  24   ------------------------------------------------------------------------------------......  29

                                      ---------------->                                  
                                      R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_5232   274  GTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  324
D  100.0% (7/7)     IGHD3-16*02  30   .--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    -.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_38338

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           419     2e-119
IGHD7-27*01                                                                                           21.8    0.045 
IGHJ2*01                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD7-27*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTCCC	CTAACTGGGGA	TTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTCCCCTAACTGGGGATTTCTGGTTCTTCGATCTC	ARAPLTGDFWFFDL	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  S  S  V  K  V  S  C  T  A  S  G  G  T  F  T  N  S
                    Query_5233   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGGAGCCTGGGTCCTCGGTGAAGGTCTCCTGCACGGCTTCTGGAGGCACCTTCACCAACTC  90
V  96.2% (279/290)  IGHV1-69*01  6    ..................G............A..............................A....................G..G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  S  P  N  Y  A  Q
                    Query_5233   91   TGCTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTTCACCAAACTACGCACA  180
V  96.2% (279/290)  IGHV1-69*01  96   ........G................................................................A..G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  S  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_5233   181  GAAGTTCCAGGGCAGAGTCACGATTAGCGCGGACGAATCCACGAGCACAGCCTACATGGAACTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  96.2% (279/290)  IGHV1-69*01  186  ..........................C.................................G.............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  A  P  L  T  G  D  F  W  F  F  D  L  W  G  R  G  T  L  V  T  V  S  A  
                    Query_5233   271  CGTGTATTACTGTGCGAGAGCTCCCCTAACTGGGGATTTCTGGTTCTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCGCAG  359
V  96.2% (279/290)  IGHV1-69*01  276  ....................---------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                       
D  100.0% (11/11)   IGHD7-27*01  1    -------------------------...........-----------------------------------------------------  11
J  96.0% (48/50)    IGHJ2*01     4    ---------------------------------------.....A........................................T...  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_315771

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           353     1e-99
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAT	TTACTTGGATAGCAGTGGT	AATCCTCAGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAATTTACTTGGATAGCAGTGGTAATCCTCAGGACGGTATGGACGTC	AREIYLDSSGNPQDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5234   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-21*01  47   .....................................C......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  N  D  N  A  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5234   91   AGTGGGTCTCATCCATTAGTAATGATAATGCTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-21*01  137  .....................G.AG..G.AG...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  R  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  I  Y  L  D  S  S  
                    Query_5234   181  AGAACTCACTGTATCTGCGAATGAACAGCCTGAGAGCCGACGACACGGCTGTTTATTACTGTGCGAGAGAAATTTACTTGGATAGCAGTG  270
V  95.2% (238/250)  IGHV3-21*01  227  ..................A.....................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.2% (16/19)    IGHD3-22*01  4    -------------------------------------------------------------------------.....AT.....T....  20

                                      IMGT--------------------->                                 
                                      G  N  P  Q  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5234   271  GTAATCCTCAGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  84.2% (16/19)    IGHD3-22*01  21   ..---------------------------------------------------------  22
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_313978

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           366     2e-103
IGHD1-26*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGCCCTTTTA	TGGGGGCTACT	TGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGCCCTTTTATGGGGGCTACTTGGATTGACCAC	ARCPFMGATWIDH	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5235   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (241/248)  IGHV3-33*01  47   ................................................A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  Y  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5235   91   AGTGGGTGGCAATTATATACTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  97.2% (241/248)  IGHV3-33*01  137  ...........G......GG.................................................................T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  I  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  C  P  F  M  G  A  T  
                    Query_5235   181  AGAACACGCTGTATCTGCAAATGATCAACCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGATGCCCTTTTATGGGGGCTACTT  270
V  97.2% (241/248)  IGHV3-33*01  227  ........................A..G........................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD1-26*01  8    ------------------------------------------------------------------------------....A......-  18

                                      ---------->                                  
                                      W  I  D  H  W  G  R  G  T  L  V  T  V  S  S  
                    Query_5235   271  GGATTGACCACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  315
J  95.2% (40/42)    IGHJ4*02     7    ---.....T.........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_313976

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            322     2e-90
IGHD3-9*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAAGAGCGGTACGCATTGAT	ACTGTTTATTA	CGAGGGGCCTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAAGAGCGGTACGCATTGATACTGTTTATTACGAGGGGCCTCCTGACTAC	ATRAVRIDTVYYEGPPDY	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  N  S  N  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_5236  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGTCCATCAGTAATAGTAACTGGTGGACTTGGATTCGCCAGCCCCCAGGAAAGGGGCTG  90
V  92.2% (225/244)  IGHV4-4*01  49   ................................C........C.G..............G....G.C..............G.........  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  I  D  S  G  S  T  N  Y  N  P  S  L  M  S  R  V  I  I  S  L  D  K  S  K 
                    Query_5236  91   GAGTGGATTGGGGAAATTATTGATAGTGGGAGCACCAACTACAACCCGTCCCTCATGAGTCGAGTCATCATCTCACTAGACAAGTCCAAG  180
V  92.2% (225/244)  IGHV4-4*01  139  .................CTA.C.................................A...........C...A...G..............  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                      N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  T  R  A  V  R  I  D  T  V 
                    Query_5236  181  AATCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGACAAGAGCGGTACGCATTGATACTGTT  270
V  92.2% (225/244)  IGHV4-4*01  229  ..C..............G....G................................G........--------------------------  292
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  90.9% (10/11)    IGHD3-9*01  17   ------------------------------------------------------------------------------------....G.  22

                                     GT--------------------->                                  
                                      Y  Y  E  G  P  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5236  271  TATTACGAGGGGCCTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  90.9% (10/11)    IGHD3-9*01  23   .....-----------------------------------------------------  27
J  100.0% (41/41)   IGHJ4*02    8    -----------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_313977

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           338     5e-95
IGHD1-26*01                                                                                           25.7    0.003
IGHJ1*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD1-26*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	ATC	GTATAGTGGAAGCTAC	AGGTT	CTTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAATCGTATAGTGGAAGCTACAGGTTCTTCCAACAC	AKESYSGSYRFFQH	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  E  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5237   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTTTGAGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-30*18  47   ..............................................C.A..GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  V  I  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  G  D  N  S  
                    Query_5237   91   AGTGGGTGGCAGTTGTCATATATGATGGAAGTAACAAGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCGGGGACAATTCCA  180
V  93.2% (233/250)  IGHV3-30*18  137  ..............A.ATC...............T..A.......................................A.A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  I  Y  Y  C  A  K  E  S  Y  S  G  S  Y  
                    Query_5237   181  AGAACACGCTGTATCTGCAGATGAACAGCCTGAGGGTTGAGGACACGGCTATATATTACTGTGCGAAAGAATCGTATAGTGGAAGCTACA  270
V  93.2% (233/250)  IGHV3-30*18  227  ...................A..............A.C.............G.G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD1-26*01  2    -------------------------------------------------------------------------.........G......-  17

                                      ------------->                                
                                      R  F  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5237   271  GGTTCTTCCAACACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTC  316
J  97.6% (41/42)    IGHJ1*01     9    ----......G...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_313974

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD1-1*01                                                                                            10.3    120  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCCGAGGGTAAA	AACGA	N/A	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCCGAGGGTAAAAACGAACTATTACGGGATGGACGTC	ARGPRVKTNYYGMDV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	226	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  D  G  S  I  S  T  N  F  W  S  W  I  R  Q  P  P  G  K  G  L  D 
                    Query_5238   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGATGGCTCCATCAGCACTAACTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAC  90
V  93.4% (226/242)  IGHV4-59*01  49   ..................A.........G............T.G.T...A.......................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  S  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5238   91   TGGATTGGGTATATCTCTTCCAGTGGAAATACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAT  180
V  93.4% (226/242)  IGHV4-59*01  139  ................A..A......G.GC...........................................................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  V  K  T  N  Y  Y 
                    Query_5238   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTATTGTGCGAGGGGCCCGAGGGTAAAAACGAACTATTAC  270
V  93.4% (226/242)  IGHV4-59*01  229  .............A.................................G.....C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-1*01   12   -----------------------------------------------------------------------------.....--------  16
J  94.3% (50/53)    IGHJ6*02     10   ----------------------------------------------------------------------------------....C...  17

                                      ----------->                                 
                                       G  M  D  V  W  G  L  G  T  T  V  T  V  S  S 
                    Query_5238   271  GGGATGGACGTCTGGGGCCTAGGGACCACGGTCACCGTCTCCTCA  315
J  94.3% (50/53)    IGHJ6*02     18   ..T................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_212291

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-28*01                                                                                           367     6e-104
IGHD1-26*01                                                                                           14.1    8.3   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-28*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAA	TTGCATCGGTCGCGC	GTGGGAG	T	TACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGCATCGGTCGCGCGTGGGAGTTACGTTGACTAC	ARIASVARGSYVDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	112	2	0	98.2
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	241	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  N  N  W  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_5239   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCATCAGCAGTAATAACTGGTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGACTG  90
V  97.6% (241/247)  IGHV4-28*01  49   ..............................................G...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  S  N  W  W  G  W  I  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  S  I  S  Y  T  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 
                    Query_5239   91   GAGTGGATTGGGTCCATCTCTTATACTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAG  180
V  97.6% (241/247)  IGHV4-28*01  139  .............A.....A.....G................................................................  228
                                       E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  R  S  V  T  A  V  D  T  A  V  Y  F  C  A  R  I  A  S  V  A  R  G  S 
                    Query_5239   181  AACCAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGTGGACACGGCCGTGTATTTCTGTGCGAGAATTGCATCGGTCGCGCGTGGGAGT  270
V  97.6% (241/247)  IGHV4-28*01  229  .......................C...............................A...........-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  V  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD1-26*01  7    ----------------------------------------------------------------------------------.......-  13

                                      ----------->                                  
                                       Y  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5239   271  TACGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.8% (45/46)    IGHJ4*02     3    ...T..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_313970

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           410     1e-116
IGHD6-13*01                                                                                           12.2    36    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	292	3	3	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_5240   3    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCA  92
V  95.2% (276/290)  IGHV5-51*01  2    ....G.................................................A...............T...................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_5240   93   CCTACTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCTTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGACACCAGATACA  182
V  95.2% (276/290)  IGHV5-51*01  92   G.........................A.......G......C......G..............................T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  N  T  A  Y  L  Q  W  S  T  L  K  A  S  D  
                    Query_5240   183  GTCCGTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACA  272
V  95.2% (276/290)  IGHV5-51*01  182  .C......................C...................A...G.......................G.................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                 
                                      T  A  M  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  P  G  T  L  V  T  V  S  S 
                    Query_5240   273  CCGCCATGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCA  358
V  95.2% (276/290)  IGHV5-51*01  272  ....................------------------------------------------------------------------  291
                                      T  A  M  Y  Y  C  A                                                                   
D  88.9% (8/9)      IGHD6-13*01  4    -------------------------...A.....----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     8    ----------------------------------------------..............A.........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_25816

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           316     2e-88
IGHD6-6*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5241   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.7% (225/248)  IGHV3-21*01  47   ............................T............AG...C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  T  R  D  N  G  
                    Query_5241   91   AGTGGGTCTCATCCATCAGTAGTAGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCATCACCAGAGACAACGGCA  180
V  90.7% (225/248)  IGHV3-21*01  137  ................T........T...AGT......T.C..C..A......G..A.................T............C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_5241   181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  90.7% (225/248)  IGHV3-21*01  227  ....C..................AA...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5241   271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_25810

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           366     2e-103
IGHD2-2*01                                                                                            12.2    37    
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAGCCACAATTAGTCCG	AGTAGT	TT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCCACAATTAGTCCGAGTAGTTTCTACTACGGTATGGACGTC	ARDLATISPSSFYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	262	28	0	90.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  T  V  S  C  K  S  S  G  Y  T  F  T  S  Y 
                    Query_5242   2    CAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGACGGTCTCCTGCAAGTCTTCTGGGTACACCTTTACCAGTTAC  91
V  90.3% (262/290)  IGHV1-18*04  7    ...................C.............................A.............G.......T..............C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  Y  Y  A  Q 
                    Query_5242   92   GGCATCACCTGGGTGCGGCAGGCCCCTGGACAGGGCCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACATACTATGCACAG  181
V  90.3% (262/290)  IGHV1-18*04  97   ..T....G.........A..............A..G.............................C......A.....A...........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  M  T  R  N  T  S  T  S  T  V  H  M  E  V  R  G  L  T  S  D  D  T  A 
                    Query_5242   182  ATGGTCCGCGACAGAGTCACCATGACCAGGAATACATCCACGAGCACAGTCCACATGGAGGTTAGGGGCCTGACATCTGACGACACGGCC  271
V  90.3% (262/290)  IGHV1-18*04  187  .A.C...AG.G.................CAG.C................C.T........C.G...A......G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  I  S  P  S  S  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_5242   272  GTGTATTACTGTGCGAGAGATTTAGCCACAATTAGTCCGAGTAGTTTCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACC  361
V  90.3% (262/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD2-2*01   11   ---------------------------------------......---------------------------------------------  16
J  100.0% (52/52)   IGHJ6*02     11   -----------------------------------------------...........................................  53

                                               
                                       V  S  S 
                    Query_5242   362  GTCTCCTCA  370
J  100.0% (52/52)   IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_186810

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           366     2e-103
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	ACATCGGGG	TAGCAGCAACTGGTAC	CCAGAGTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGAACATCGGGGTAGCAGCAACTGGTACCCAGAGTTTGATGCTTTTCATATT	ATEHRGSSNWYPEFDAFHI	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  V  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5243   1    GGTCCCTGAGACTCTCCTGTGAAGTCTCTGGATTCACCTTTAGCAGCTATTCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-23*01  47   .....................C..C.........................G......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  S  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5243   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTAGTAGCACATACTACGCAGACTCCGTGAAGGGTCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.8% (242/250)  IGHV3-23*01  137  .............................G...............................C............................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  E  H  R  G  S  S  N  
                    Query_5243   181  AGAACACGCTGCATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGACAGAACATCGGGGTAGCAGCAACT  270
V  96.8% (242/250)  IGHV3-23*01  227  ...........T......................................................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD6-13*01  6    -------------------------------------------------------------------------------........G..  16

                                      -IMGT----------------------->                                  
                                      W  Y  P  E  F  D  A  F  H  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5243   271  GGTACCCAGAGTTTGATGCTTTTCATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  333
D  93.8% (15/16)    IGHD6-13*01  17   .....----------------------------------------------------------  21
J  96.0% (48/50)    IGHJ3*02     1    -------------..........G....C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_25811

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD5-12*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACGCGGGA	TGGCTAC	AATACCTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACGCGGGATGGCTACAATACCTATTGACTGC	ARGRGMATIPIDC	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  T  Y  Y  W  T  W  I  R  R  P  P  G  K  G  L  E 
                    Query_5244   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTACTTACTACTGGACCTGGATCCGGCGGCCCCCAGGGAAGGGACTGGAA  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................A...G...........G...........A.....................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  T  H  Y  S  G  D  T  N  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  T  S  K  N 
                    Query_5244   91   TGGATTGGCTATACTCATTACAGTGGGGACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCATCATATCAGTAGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-59*01  139  ........G....TCT...........AG...................................C.........................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       L  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  G  M  A  T  I  P  I 
                    Query_5244   181  CTGCTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGGACGCGGGATGGCTACAATACCTATT  270
V  93.4% (228/244)  IGHV4-59*01  229  .A.T.........A.......................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-12*01  11   -------------------------------------------------------------------------.......----------  17
J  97.6% (40/41)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                 
                                       D  C  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_5244   271  GACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  309
J  97.6% (40/41)    IGHJ4*02     9    ....A..................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_78979

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            294     6e-82
IGHD3-9*01                                                                                            12.2    33   
IGHJ1*01                                                                                              39.1    6e-07


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-9*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAAAGAGACGGGATCGGAAATGACCTCGCCCAA	ATATTT	CTTGGT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGAAAAAGAGACGGGATCGGAAATGACCTCGCCCAAATATTTCTTGGTC	TREKETGSEMTSPKYFLV	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	46	5	0	90.2
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	100	14	0	87.7
CDR3-IMGT (germline)	241	248	8	7	1	0	87.5
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  R  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_5245  1    ACCCTGTCCCTCACCTGCGCTGTATCTGGTGGCTCCATCAGTAGTAGTCGGTGGTGGAGTTGGGTCCGCCAGACACCAGGGAAGGGGCTG  90
V  87.9% (218/248)  IGHV4-4*02  49   .......................C.................C......AAC.....................C.C...............  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  L  G  V  I  Y  H  G  G  T  T  N  Y  N  P  S  S  K  S  R  I  T  L  P  A  D  K  S  K 
                    Query_5245  91   GAGTGGCTTGGTGTAATCTATCATGGGGGGACTACAAATTACAACCCGTCCTCCAAGAGTCGAATCACCTTGCCAGCAGACAAATCCAAG  180
V  87.9% (218/248)  IGHV4-4*02  139  ......A....G.A..........A.T....GC..C..C............CT..........G.....A.AT...T......G......  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                      N  Q  F  S  L  S  L  R  S  V  T  A  A  D  T  A  F  Y  Y  C  T  R  E  K  E  T  G  S  E  M 
                    Query_5245  181  AACCAGTTCTCCCTGAGCCTGAGGTCTGTGACCGCCGCGGACACGGCCTTTTATTACTGTACGAGAGAAAAAGAGACGGGATCGGAAATG  270
V  87.9% (218/248)  IGHV4-4*02  229  ................AG.....C........................G.G.........G.......----------------------  296
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         

                                     GT--------------------->                                  
                                      T  S  P  K  Y  F  L  V  W  G  Q  G  A  L  V  F  F  S  S  
                    Query_5245  271  ACCTCGCCCAAATATTTCTTGGTCTGGGGCCAGGGCGCCCTAGTCTTCTTCTCCTCAG  328
D  100.0% (6/6)     IGHD3-9*01  9    -----------......-----------------------------------------  14
J  85.7% (30/35)    IGHJ1*01    18   -----------------------.............A....G...AC.G.........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_78978

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           316     2e-88
IGHD2-8*02                                                                                            19.9    0.16 
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-8*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCGGGAC	TTGTACTGGT	TACACCTGCTACGACGCTC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCGGGACTTGTACTGGTTACACCTGCTACGACGCTCCTTTTGATATC	ARDPGTCTGYTCYDAPFDI	237	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	20	4	0	83.3
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	122	21	16	5	0	76.2
FR3-IMGT	123	236	114	112	2	0	98.2
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	230	216	14	0	93.9


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  S  V  S  Y  N  S  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  I  L 
                    Query_5246   15   TGTGCAGCCTCTGGGTTCTCCGTCAGTTACAACTCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTGAGTGGGTCTCAATTCTT  104
V  93.9% (216/230)  IGHV3-53*01  64   ..................A........AG.....A.....G..............................G............G..A..  153
                                       C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I 

                                      ---CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-----------
                                       Y  S  G  G  Y  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 
                    Query_5246   105  TATAGTGGTGGTTATACATACTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACCCTGTATCTTCAA  194
V  93.9% (216/230)  IGHV3-53*01  154  .....C......AGC......................A.......................................G............  243
                                       Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 

                                      -----------------------------------------><-----------------------CDR3-IMGT---------------
                                       M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  G  T  C  T  G  Y  T  C  Y  D  A  P 
                    Query_5246   195  ATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGATCCCGGGACTTGTACTGGTTACACCTGCTACGACGCTCCT  284
V  93.9% (216/230)  IGHV3-53*01  244  ..................................................----------------------------------------  293
                                       M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                           
D  100.0% (10/10)   IGHD2-8*02   7    -----------------------------------------------------------..........---------------------  16
J  97.8% (44/45)    IGHJ3*02     6    ----------------------------------------------------------------------------------------..  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5246   285  TTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCGTCAG  327
J  97.8% (44/45)    IGHJ3*02     8    ......................................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_78975

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD2-2*02                                                                                            12.2    32    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCC	CTGGTATAC	TTACGTCAGCGGGGGATATG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCCCTGGTATACTTACGTCAGCGGGGGATATGTTGACTAC	ARGPWYTYVSGGYVDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  I  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5247   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ...................C...............................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S 
                    Query_5247   91   CTGGAGTGGATTGGGTGCATCTATTATAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGCTACCATATCAGTAGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ................A.........C.......G................................T......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  P  A  V  Y  Y  C  A  R  G  P  W  Y  T  Y  V 
                    Query_5247   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACCCGGCCGTCTATTACTGTGCGAGAGGTCCCTGGTATACTTACGTC  270
V  96.4% (241/250)  IGHV4-31*03  229  ..........................C..................A.......G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (8/9)      IGHD2-2*02   22   --------------------------------------------------------------------------...C.....-------  30

                                      GT------------------>                                  
                                       S  G  G  Y  V  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_5247   271  AGCGGGGGATATGTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  325
J  97.6% (41/42)    IGHJ4*02     7    -------------.............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_78974

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	ATTTAGAATATCAGTTTTCACTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATTTAGAATATCAGTTTTCACTTACTACTTTGACTAC	AREFRISVFTYYFDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  I  K  N  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5248   1    ACCCTGTCCCTCACCTGCAGCGTCTCTGGTGCCTCCATCAAAAATTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...................CT..........G........GT.G..A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  E  D  T  S  K  N 
                    Query_5248   91   TGGATTGGGTATATCTACTACAGTGGGAGCACCAACTATAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGAAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  .................T....................C..................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  E  F  R  I  S  V  F  T  Y 
                    Query_5248   181  CAGTTCTCCCTGAAACTGACTTCTGTGACCGCTGCGGACACGGCCATTTATTATTGTGCGAGAGAATTTAGAATATCAGTTTTCACTTAC  270
V  93.5% (229/245)  IGHV4-59*01  229  ..............G....GC........................G.G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  97.9% (47/48)    IGHJ4*02     1    ----------------------------------------------------------------------------------------..  2

                                      ----------->                                  
                                       Y  F  D  Y  W  S  Q  G  T  L  V  T  V  S  S  
                    Query_5248   271  TACTTTGACTACTGGAGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.9% (47/48)    IGHJ4*02     3    ...............G..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_78977

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           315     5e-88
IGHD3-10*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CGAGTCAAATCCTC	TGGTTCGGGGAG	GGCAAAA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCGAGTCAAATCCTCTGGTTCGGGGAGGGCAAAAACTACTTTGACCAC	AKASQILWFGEGKNYFDH	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	225	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  N  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5249   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAATAACTTTGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.4% (225/249)  IGHV3-30*18  47   ....................G.....................G..G..A...C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  Y  D  G  S  K  K  L  Y  A  D  S  L  R  G  R  F  T  I  S  R  D  S  S  
                    Query_5249   91   AGTGGCTGGCAGTTATTTCATATGATGGAAGTAAAAAGTTATATGCAGACTCCTTGAGGGGCCGATTTACCATCTCCAGAGACAGCTCCA  180
V  90.4% (225/249)  IGHV3-30*18  137  .....G..........A.................T..A.AC............G...A.........C................AT....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  S  S  L  G  A  E  D  T  A  A  Y  Y  C  A  K  A  S  Q  I  L  W  F  
                    Query_5249   181  AGAACACACTGTATCTCCAAATGAGCAGCCTGGGCGCTGAGGACACGGCTGCCTATTATTGTGCGAAAGCGAGTCAAATCCTCTGGTTCG  270
V  90.4% (225/249)  IGHV3-30*18  227  .......G........G.......A.......A.A................TG.....C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD3-10*01  10   -----------------------------------------------------------------------------------.......  16

                                      IMGT--------------------->                                  
                                      G  E  G  K  N  Y  F  D  H  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_5249   271  GGGAGGGCAAAAACTACTTTGACCACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  330
D  100.0% (12/12)   IGHD3-10*01  17   .....-------------------------------------------------------  21
J  95.8% (46/48)    IGHJ4*02     1    ------------...........T.......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_78976

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           389     2e-110
IGHD3-3*01                                                                                            10.3    131   
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CGTCCTCTACACAGTGCGACCGGAA	GATTT	N/A	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCGTCCTCTACACAGTGCGACCGGAAGATTTC	AVLYTVRPEDF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	267	18	0	93.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_5250   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAACTA  90
V  93.7% (267/285)  IGHV1-46*01  6    ..................G...................................................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  H  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  I  V  N  P  N  N  G  K  T  T  Y  A  Q
                    Query_5250   91   CTATATTCACTGGGTGCGACAGGCCCCTGGACAAGGGCCCGAGTGGATGGGAATAGTCAACCCTAATAATGGTAAGACAACCTACGCGCA  180
V  93.7% (267/285)  IGHV1-46*01  96   ......G...............................TT...............A.........G.GG.....GC....G......A..  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  N  L  R  S  Q  D  T  A
                    Query_5250   181  GAACTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAACTGAGCAACCTGAGATCTCAGGACACGGC  270
V  93.7% (267/285)  IGHV1-46*01  186  ...G........................................................G.......G..........G..........  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        V  Y  Y  C  A  V  L  Y  T  V  R  P  E  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_5250   271  CGTCTATTACTGTGCCGTCCTCTACACAGTGCGACCGGAAGATTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  350
V  93.7% (267/285)  IGHV1-46*01  276  ...G...........-----------------------------------------------------------------  290
                                        V  Y  Y  C  A                                                                 
D  100.0% (5/5)     IGHD3-3*01   8    ----------------------------------------.....-----------------------------------  12
J  97.1% (34/35)    IGHJ4*02     14   ---------------------------------------------......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_78971

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            294     6e-82
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TCAG	TAGCAGTGGCTGG	AC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGTAGCAGTGGCTGGACCTTTGAGTCC	VSSSGWTFES	246	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	56	27	18	6	3	66.7
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	131	24	21	3	0	87.5
FR3-IMGT	132	245	114	101	13	0	88.6
CDR3-IMGT (germline)	246	246	1	1	0	0	100
Total	N/A	N/A	246	219	24	3	89


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  P  Y  R  W  M  N  W  V  R  Q  A  P  G  K  G  
                    Query_5251   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACATTTGATCCTTATCGTTGGATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGC  90
V  89.0% (219/246)  IGHV3-7*01   47   .....................................C...AG.AGC...---.......GC............................  133
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y     W  M  S  W  V  R  Q  A  P  G  K  G  

                                      ----------------><-------CDR2-IMGT------><------------------------------------------------
                                      L  E  W  V  A  N  I  N  L  D  G  S  D  K  N  Y  V  D  S  V  R  G  R  L  T  I  S  R  D  D  
                    Query_5251   91   TGGAGTGGGTGGCCAACATAAACCTAGATGGAAGTGACAAAAATTATGTGGACTCTGTGAGGGGCCGACTCACCATCTCCAGAGACGACG  180
V  89.0% (219/246)  IGHV3-7*01   134  ......................G.A............G...T.C................A.......T.................A...  223
                                      L  E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  

                                      ----FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-----
                                      A  R  N  S  V  Y  L  Q  M  D  S  L  R  V  E  D  T  A  I  Y  H  C  V  S  S  S  G  W  T  F  
                    Query_5251   181  CCAGGAACTCAGTATATCTGCAAATGGACAGCCTGAGAGTCGAGGACACGGCTATTTATCACTGTGTCAGTAGCAGTGGCTGGACCTTTG  270
V  89.0% (219/246)  IGHV3-7*01   224  ...A.......C.G............A............C.............G.G...T......------------------------  289
                                      A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                          
D  100.0% (13/13)   IGHD6-19*01  6    ----------------------------------------------------------------------.............-------  18
J  95.2% (40/42)    IGHJ4*02     5    -------------------------------------------------------------------------------------.....  9

                                      ---->                                
                                      E  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5251   271  AGTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  307
J  95.2% (40/42)    IGHJ4*02     10   .C.A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_78972

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            322     2e-90
IGHD1-7*01                                                                                            14.1    8.4  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGATA	TAAAAGGCTACACA	AACTGGTACT	TCC	TTGCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGGGATATAAAAGGCTACACAAACTGGTACTTCCTTGCCTAT	TRDIKGYTNWYFLAY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	252	10	7	3	0	70
Total	N/A	N/A	252	229	23	0	90.9


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  S  F  D  A  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5252  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTGATGCTTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  90.9% (229/252)  IGHV3-9*01  47   ....................................C........A............................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  I  S  W  T  G  G  C  I  G  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  A  
                    Query_5252  91   AGTGGGTCTCAGGCATTAGTTGGACTGGTGGTTGTATTGGCTATGCGGACTCTGTGCAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.9% (229/252)  IGHV3-9*01  137  .............T..........A.A.....A.C..A..................A.................................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                     K  S  L  L  F  L  E  M  R  S  L  R  P  E  D  T  A  L  Y  F  C  T  R  D  I  K  G  Y  T  N  
                    Query_5252  181  AGAGTCTCCTATTTCTGGAAATGAGAAGTCTGAGACCTGAGGACACGGCCTTGTATTTCTGTACAAGGGATATAAAAGGCTACACAAACT  270
V  90.9% (229/252)  IGHV3-9*01  227  ...ACTC...G.A....C......AC.........G.....................A....G...AA....------------------  298
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  90.0% (9/10)     IGHD1-7*01  6    --------------------------------------------------------------------------------------....  9

                                     ---------------->                                  
                                     W  Y  F  L  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5252  271  GGTACTTCCTTGCCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  90.0% (9/10)     IGHD1-7*01  10   ..A...---------------------------------------------  15
J  95.2% (40/42)    IGHJ4*02    7    ---------...A...C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_120693

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           364     5e-103
IGHD3-9*01                                                                                            14.1    8.5   
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-9*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCTACG	TTTTGGCTGG	GAGAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTACGTTTTGGCTGGGAGAATGATGCACTTGATATC	ARHLRFGWENDALDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	242	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_5253   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.4% (242/251)  IGHV4-39*01  49   .........................................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  F  G  S  I  Y  Y  S  G  S  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  V  D  T  P 
                    Query_5253   91   CTGGAGTGGTTTGGGAGTATCTATTATAGTGGGAGCACCTACGACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCCGTTGACACGCCC  180
V  96.4% (242/251)  IGHV4-39*01  139  .........A................................T...............................A.....A......T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  R  F  G  W  E 
                    Query_5253   181  AAGAATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGACATCTACGTTTTGGCTGGGAG  270
V  96.4% (242/251)  IGHV4-39*01  229  .....C.............A.......................................C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-9*01   12   -----------------------------------------------------------------------------.....A....---  21

                                      ----------------->                                  
                                       N  D  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5253   271  AATGATGCACTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  96.0% (48/50)    IGHJ3*02     1    --......TT..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_60336

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           349     2e-98
IGHD1-26*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GAG	GTGGGAG	T	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGAGGTGGGAGTTACTACTACGCCATGGACGTC	ARGGGSYYYAMDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  H  W  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_5254   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAGTCATTGGATGCACTGGGTCCGCCAAGCTCCAGGGAGGGGGCTGG  90
V  94.8% (236/249)  IGHV3-74*01  47   ...........................................T..CT.C...............................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  H  T  D  G  S  S  T  S  Y  V  D  S  V  K  G  R  F  T  V  S  R  D  N  G  
                    Query_5254   91   TGTGGGTCTCACGTATTCACACTGATGGGAGTAGCACAAGCTATGTGGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGGCA  180
V  94.8% (236/249)  IGHV3-74*01  137  .................A.T.G.....................C.C.........................A...............C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  G  S  Y  Y  Y  
                    Query_5254   181  AGAACACGCTGTATCTGCAAATGAACGGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGGAGGTGGGAGTTACTACTACG  270
V  94.8% (236/249)  IGHV3-74*01  227  ..........................A..........................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  7    ------------------------------------------------------------------------.......-----------  13
J  96.3% (52/54)    IGHJ6*02     9    --------------------------------------------------------------------------------..........  18

                                      ---------->                                 
                                      A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5254   271  CCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  96.3% (52/54)    IGHJ6*02     19   GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_120691

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            315     5e-88
IGHD2-15*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCATTGTGGA	AGTGGTGG	CTGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCATTGTGGAAGTGGTGGCTGTTTCTACTTTGACATC	ARVHCGSGGCFYFDI	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	46	5	0	90.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	224	23	0	90.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  S  D  S  I  S  G  S  D  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_5255   1    ACCCTGTCCCTCACCTGCGCTGTCTCTAGTGACTCCATCAGCGGTTCTGACTGGTGGACTTGGATCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.7% (224/247)  IGHV4-4*02   49   ...........................G...G..........A..AG.A.........G....G..........................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  S  A  D  T  H  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  N  S  K 
                    Query_5255   91   GAGTGGATCGGAGAGATCCATCATAGTGCGGACACCCACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAACTCTAAG  180
V  90.7% (224/247)  IGHV4-4*02   139  ........T..G..A...T.........G.AG....A..............................................G..C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  E  L  R  S  V  T  A  A  D  A  A  L  Y  Y  C  A  R  V  H  C  G  S  G  G  C 
                    Query_5255   181  AACCAATTCTCCCTGGAGCTGAGGTCTGTGACCGCCGCGGACGCGGCCCTGTATTACTGTGCGAGAGTTCATTGTGGAAGTGGTGGCTGT  270
V  90.7% (224/247)  IGHV4-4*02   229  .....G.........A.......C..................A.....G..................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD2-15*01  11   ------------------------------------------------------------------------------........----  18

                                      -------------->                                  
                                       F  Y  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5255   271  TTCTACTTTGACATCTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  319
J  93.6% (44/47)    IGHJ4*02     2    --..........TA..................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_48200

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           310     1e-86
IGHD5-18*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	TGGGGGGAGAA	GTGGATACACCTACGGTTA	TTTG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTGGGGGGAGAAGTGGATACACCTACGGTTATTTGGACTAT	AGGRSGYTYGYLDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  K  F  R  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5256   1    GGTCCCTGAGACTCTCCTGCGCAACGTCTGGATTCAAGTTCAGAAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.6% (221/244)  IGHV3-33*01  47   ...................T...G............CC.....T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  V  W  Y  D  G  L  N  K  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5256   91   AGTGGGTGGCAAATGTTTGGTATGATGGACTAAATAAGAATTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  90.6% (221/244)  IGHV3-33*01  137  ...........GT.A.A............AGT.....AT.C...........C.....................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  D  D  T  A  V  Y  F  C  A  G  G  R  S  G  Y  T  Y  
                    Query_5256   181  AGAACACCCTGTATTTGCAAATGGACAGCCTGAGAGCCGACGACACGGCTGTCTATTTCTGTGCTGGGGGGAGAAGTGGATACACCTACG  270
V  90.6% (221/244)  IGHV3-33*01  227  .......G......C........A................G...........G....A......--------------------------  290
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  89.5% (17/19)    IGHD5-18*01  1    ---------------------------------------------------------------------------.........G...T.  15

                                      ------------->                                  
                                      G  Y  L  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_5256   271  GTTATTTGGACTATTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  318
D  89.5% (17/19)    IGHD5-18*01  16   ....--------------------------------------------  19
J  95.0% (38/40)    IGHJ4*02     9    --------.....C.......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_48201

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           363     1e-102
IGHD6-19*01                                                                                           16.1    2.2   
IGHJ3*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAGGAGGGGGG	TAGCAGTG	CCGGC	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAGGAGGGGGGTAGCAGTGCCGGCGCTTTTGATATC	ARDKEGGSSAGAFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5257   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-21*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  S  S  S  D  Y  I  S  Y  A  A  S  V  K  G  R  F  T  T  S  R  D  N  A  
                    Query_5257   91   AGTGGGTCTCATCCATTACTAGTAGTAGTGATTACATATCCTACGCAGCCTCAGTGAAGGGCCGATTCACCACCTCCAGAGACAACGCCA  180
V  96.4% (241/250)  IGHV3-21*01  137  ..................G..........AG........A........A.......................T.................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  K  E  G  G  S  S  
                    Query_5257   181  AGAACTCACTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATAAGGAGGGGGGTAGCAGTG  270
V  96.4% (241/250)  IGHV3-21*01  227  ..........G...........................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  6    ----------------------------------------------------------------------------------........  13

                                      ---------------->                                  
                                      A  G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5257   271  CCGGCGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  100.0% (46/46)   IGHJ3*02     5    -----..............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_48202

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           411     5e-117
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	276	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  H  S  F  T  N  F
                    Query_5258   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCCGGACACAGTTTTACCAACTT  90
V  95.5% (276/289)  IGHV5-51*03  6    .....................................................................T...T....C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  G  P
                    Query_5258   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAGGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACGGCCC  180
V  95.5% (276/289)  IGHV5-51*03  96   .................................A.................G............................G....A....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_5258   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAATACCGCCTACCTGCAGTGGAGTAGCCTGCAGGCCTCGGACACCGC  270
V  95.5% (276/289)  IGHV5-51*03  186  ............................................GC....................C......A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5258   271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGTCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.5% (276/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    ------------------------------------------............C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_60337

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            330     1e-92
IGHD3-10*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTGAC	TATTACGATGGTTC	AGGCAGGTCTTCTGGGGGCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTGACTATTACGATGGTTCAGGCAGGTCTTCTGGGGGCCGACTAC	ASLTITMVQAGLLGADY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  S  T  S  N  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_5259   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATCAGTACTAGTAACTGGTGGACTTGGGTCCGCCAGCCTCCAGGGAAGGGGCTG  90
V  93.1% (228/245)  IGHV4-4*02   49   ..................G............G.........C.G..............G...............C...............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  L  H  S  G  T  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  I  D  K  S  K 
                    Query_5259   91   GAGTGGATTGGGGAAATCCTTCACAGTGGGACCACCAACTACAACCCGTCCCTCAGGAGTCGAGTCACCATCTCAATAGACAAGTCGAAG  180
V  93.1% (228/245)  IGHV4-4*02   139  ..................TA...T.......G.......................A...............A...G..........C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  T  I  T  M  V  Q  A 
                    Query_5259   181  AACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGCCTGACTATTACGATGGTTCAGGCA  270
V  93.1% (228/245)  IGHV4-4*02   229  ................A.....G...........................G..............-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  92.9% (13/14)    IGHD3-10*01  2    -----------------------------------------------------------------------......T.......-----  15

                                      -------------------->                                  
                                       G  L  L  G  A  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_5259   271  GGTCTTCTGGGGGCCGACTACTGGGGCCAGGGGTCCCTAGTCACCGTCTCCTCAG  325
J  92.5% (37/40)    IGHJ4*02     9    ---------------.................AA....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_120699

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           300     8e-84
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGCCCTACTTATTATGCCAA	TAGTGGTT	CAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCCCTACTTATTATGCCAATAGTGGTTCAGACTTTGACTAC	ARGGPTYYANSGSDFDY	227	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	112	21	17	4	0	81
FR3-IMGT	113	226	114	107	7	0	93.9
CDR3-IMGT (germline)	227	233	7	7	0	0	100
Total	N/A	N/A	220	206	14	0	93.6


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-----CDR2-I
                                       S  G  F  T  V  S  S  Y  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  H  S  A 
                    Query_5260   14   TCTGGGTTCACCGTCAGCAGCTACTACATGAGCTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTCATAGCGCT  103
V  93.6% (206/220)  IGHV3-53*01  73   .................T...A.........................T.................................T......G.  162
                                       S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G 

                                      MGT-----><----------------------------------------------------FR3-IMGT--------------------
                                       G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  N  L  Q  M  N  S 
                    Query_5260   104  GGAAGTACATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTAAATCTTCAAATGAACAGC  193
V  93.6% (206/220)  IGHV3-53*01  163  ..T..C.....C..C........................................................GT.................  252
                                       G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S 

                                      --------------------------------><--------------------CDR3-IMGT-------------------->      
                                       L  R  V  Q  D  T  A  V  Y  Y  C  A  R  G  G  P  T  Y  Y  A  N  S  G  S  D  F  D  Y  W  G 
                    Query_5260   194  CTGAGAGTCCAGGACACGGCCGTGTATTATTGTGCGAGAGGAGGCCCTACTTATTATGCCAATAGTGGTTCAGACTTTGACTACTGGGGC  283
V  93.6% (206/220)  IGHV3-53*01  253  .......C.G...................C..........--------------------------------------------------  292
                                       L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                    
D  100.0% (8/8)     IGHD3-22*01  16   --------------------------------------------------------------........--------------------  23
J  100.0% (45/45)   IGHJ4*02     4    -------------------------------------------------------------------------.................  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_5260   284  CAGGGAACCCTGGTCACCGTCTCCTCAG  311
J  100.0% (45/45)   IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_120698

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           369     2e-104
IGHD5-18*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGA	GATACAGCTATGGTT	CCCAC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATGGAGATACAGCTATGGTTCCCACCTTTGACTGC	ARDGDTAMVPTFDC	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5261   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  97.2% (243/250)  IGHV3-74*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  I  S  H  I  N  S  D  G  S  S  T  N  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  A  
                    Query_5261   91   TGTGGATCTCACATATTAATAGTGATGGGAGTAGCACAAACTACGCGGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAGACAACGCCA  180
V  97.2% (243/250)  IGHV3-74*01  137  .....G......G..........................G.............................C....................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  V  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  D  T  A  M  V  
                    Query_5261   181  AGAACACACTGTATCTGCAAGTGAACAATCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGATGGAGATACAGCTATGGTTC  270
V  97.2% (243/250)  IGHV3-74*01  227  .......G............A......G..........................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD5-18*01  4    --------------------------------------------------------------------------...............-  18

                                      ------------->                                  
                                      P  T  F  D  C  W  G  R  G  T  L  V  T  V  S  S  
                    Query_5261   271  CCACCTTTGACTGCTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  318
J  95.5% (42/44)    IGHJ4*02     5    ----........A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_48208

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           310     1e-86
IGHD3-10*01                                                                                           39.1    2e-07
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	G	ACTATGGAACGGGGAGTTATTATAAC	AAGACCC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACTATGGAACGGGGAGTTATTATAACAAGACCCATGGACGTC	AKTMERGVIITRPMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	11	1	0	91.7
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	20	4	0	83.3
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	230	214	16	0	93


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  V  S  G  F  S  F  S  H  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 
                    Query_5262   13   TGTGCAGTCTCTGGATTCAGCTTCAGTCACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATA  102
V  93.0% (214/230)  IGHV3-30*18  64   .......C...........C.......AG.............................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       A  Y  D  E  S  F  K  S  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  K  S  T  L  Y  L 
                    Query_5262   103  GCATATGATGAAAGTTTTAAATCTTACGCAGCCTCCGTGAAGGGCCGATTTACCATCTCCAGAGACAATTCCAAGAGCACGCTGTATCTG  192
V  93.0% (214/230)  IGHV3-30*18  154  T.........G....AA.....AC..T....A..................C.........................A.............  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  K  T  M  E  R  G  V  I  I  T  R  P  M  D 
                    Query_5262   193  CAAATGAACAGCCTGAGAGATGAGGACACGGCTGTGTATTATTGTGCGAAGACTATGGAACGGGGAGTTATTATAACAAGACCCATGGAC  282
V  93.0% (214/230)  IGHV3-30*18  244  ...................C.....................C........----------------------------------------  293
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  92.3% (24/26)    IGHD3-10*01  6    ---------------------------------------------------.......TT.................-------------  31
J  97.6% (41/42)    IGHJ6*02     21   ------------------------------------------------------------------------------------......  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5262   283  GTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  318
J  97.6% (41/42)    IGHJ6*02     27   ................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_60334

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           341     5e-96
IGHD2-8*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGCGGGGGGTTTATCATGG	TAATGGTG	GCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGCGGGGGGTTTATCATGGTAATGGTGGCCTTGACTTC	ARRRGVYHGNGGLDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  Y  Y  W  N  W  I  R  Q  T  P  G  K  G  P  E 
                    Query_5263   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTACTACTGGAACTGGATCCGACAGACCCCAGGGAAGGGACCTGAG  90
V  94.7% (231/244)  IGHV4-59*08  49   .......................................A...............G.........G...C...............TG...  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  R  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5263   91   TGGATTGGGTATATCTATTCCAGGGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAAC  180
V  94.7% (231/244)  IGHV4-59*08  139  ...................A...T..................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  N  L  L  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  R  G  V  Y  H  G  N  G 
                    Query_5263   181  CAGTTCTCCCTGAACCTGCTCTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGAGACGGCGGGGGGTTTATCATGGTAATGGT  270
V  94.7% (231/244)  IGHV4-59*08  229  ..............G...AG.................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD2-8*01   13   -----------------------------------------------------------------------------------.......  19

                                      ----------->                                  
                                       G  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5263   271  GGCCTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTTTCCTCAG  316
D  100.0% (8/8)     IGHD2-8*01   20   .---------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    ----......A...........................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_303620

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           321     6e-90
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_5264   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_5264   91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_5264   181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.8% (225/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_5264   271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_140131

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         399     3e-113
IGHD2-21*02                                                                                           19.9    0.17  
IGHJ4*02                                                                                              56.4    4e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ATCGAGTCGAC	TGTGGCGGTGACT	ACTCTCCCCGACGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAATCGAGTCGACTGTGGCGGTGACTACTCTCCCCGACGGC	ARIESTVAVTTLPDG	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  L  G  S  G  Y  N  F  T  N  Y
                    Query_5265     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTTTGGGTTCTGGATACAACTTTACCAACTA  90
V  94.1% (272/289)  IGHV5-10-1*01  6    .............................................................AA..............G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  N  W  V  R  Q  I  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  F  Y  T  N  Y  S  P
                    Query_5265     91   CTGGATCAATTGGGTGCGCCAGATTCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTTTTACACCAACTACAGTCC  180
V  94.1% (272/289)  IGHV5-10-1*01  96   ........GC..............G..............................................C...T...........C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  S  S  L  G  A  S  D  T  A
                    Query_5265     181  GTCCTTCCAAGGCCACGTCACCATTTCAGCTGACACGTCCATCAGCACTGCCTACCTCCAGTGGAGCAGCCTGGGGGCCTCGGACACCGC  270
V  94.1% (272/289)  IGHV5-10-1*01  186  ........................C..........A.....................G...............AA...............  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          I  Y  Y  C  A  R  I  E  S  T  V  A  V  T  T  L  P  D  G  W  G  Q  G  T  M  V  I  V  S  S
                    Query_5265     271  CATATATTACTGTGCGCGAATCGAGTCGACTGTGGCGGTGACTACTCTCCCCGACGGCTGGGGCCAGGGAACCATGGTCATCGTCTCCTC  360
V  94.1% (272/289)  IGHV5-10-1*01  276  ...G............A..-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  92.3% (12/13)    IGHD2-21*02    8    ------------------------------.....T.......-----------------------------------------------  20
J  94.3% (33/35)    IGHJ4*02       14   ---------------------------------------------------------................C......C.........  46

                                          
                                          
                    Query_5265     361  AG  362
J  94.3% (33/35)    IGHJ4*02       47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_303626

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           322     2e-90
IGHD6-19*01                                                                                           12.2    33   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAATGGGAGAC	CAGGGGCTG	AGACGTCCACCCTTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAATGGGAGACCAGGGGCTGAGACGTCCACCCTTCCTTGACTCC	ARDLMGDQGLRRPPFLDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  R  Y  G  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5266   1    GGTCCCTGAGACTCTCCTGTTCAGCGTCTGGATTCACCTTCAGTCGCTATGGCTTGCACTGGGTCCGCCAGGCTCCGGGCAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-33*01  47   ....................G.......................A........A......................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  I  I  S  S  D  G  R  D  E  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5266   91   AGTGGCTGGCAATTATATCGTCTGATGGAAGGGATGAAAACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  91.2% (228/250)  IGHV3-33*01  137  .....G.....G......G..A.........TA..A..T...................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  H  T  F  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  L  M  G  D  Q  G  
                    Query_5266   181  GGCACACCTTTTTCCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCGCTGTATTATTGTGCGAGAGATTTAATGGGAGACCAGGGGC  270
V  91.2% (228/250)  IGHV3-33*01  227  A.A....GC.G.AT...................................TG.......C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD6-19*01  9    -----------------------------------------------------------------------------------...T...  15

                                      IMGT--------------------->                                
                                      L  R  R  P  P  F  L  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5266   271  TGAGACGTCCACCCTTCCTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  328
D  88.9% (8/9)      IGHD6-19*01  16   ..--------------------------------------------------------  17
J  97.5% (39/40)    IGHJ4*02     7    ------------------......A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_117354

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           338     5e-95
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GGG	CTATGCTTCGGGGAGTCATT	TCAAATCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGGGCTATGCTTCGGGGAGTCATTTCAAATCTCACTTTGACTAC	AKEGYASGSHFKSHFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  T  P  G  Q  G  L  
                    Query_5267   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAGTTATGGCATGCACTGGGTCCGCCAGACTCCAGGCCAGGGACTGG  90
V  93.2% (233/250)  IGHV3-30*18  47   ...........................................T..C........................G........A....G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  V  S  S  D  G  S  V  Q  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5267   91   AGTGGCTGGCAGTTGTATCAAGTGATGGAAGTGTTCAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCC  180
V  93.2% (233/250)  IGHV3-30*18  137  .....G........A.....TA..........AA.A.....................................................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      Q  N  T  L  Y  L  Q  M  N  S  L  R  S  E  D  T  A  V  Y  Y  C  A  K  E  G  Y  A  S  G  S  
                    Query_5267   181  AGAACACGCTGTATCTGCAAATGAATAGCCTGAGATCTGAGGATACGGCTGTTTATTACTGTGCGAAAGAGGGCTATGCTTCGGGGAGTC  270
V  93.2% (233/250)  IGHV3-30*18  227  .........................C.........G.......C........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (18/20)    IGHD3-10*01  7    -------------------------------------------------------------------------.....G..........T  23

                                      GT-------------------->                                  
                                      H  F  K  S  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5267   271  ATTTCAAATCTCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  90.0% (18/20)    IGHD3-10*01  24   ...------------------------------------------------------  26
J  100.0% (45/45)   IGHJ4*02     4    ------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_117355

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           343     2e-96
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCG	ACGGTGAC	ACCGAGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACGGTGACACCGAGAATGACTAT	AADGDTENDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  S  F  G  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_5268   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGACTCACCTTCAGTAGCTTTGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGG  90
V  94.7% (232/245)  IGHV3-33*01  47   ................................T...............A......................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  K  K  Y  Y  T  D  S  V  K  G  R  F  I  I  S  R  D  N  S  
                    Query_5268   91   AGTGGGTGGCAGTCATATGGTATGATGGAAGTAAGAAATACTATACAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCA  180
V  94.7% (232/245)  IGHV3-33*01  137  .............T....................T.........G........................C....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  F  C  A  A  D  G  D  T  E  N  D  
                    Query_5268   181  AGAACACGTTGTATCTGCAGATGAACAGCCTGAGAGTCGACGACACGGCTGTCTATTTCTGTGCGGCCGACGGTGACACCGAGAATGACT  270
V  94.7% (232/245)  IGHV3-33*01  227  ........C..........A................C...G...........G....A.......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD4-17*01  6    ---------------------------------------------------------------------........-------------  13
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5268   271  ATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   .C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_117356

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGATGGCCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTC	VRQSSDGRTKYGMDV	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	73	1	0	98.6
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	110	4	0	96.5
CDR3-IMGT (germline)	291	298	8	7	1	0	87.5
Total	N/A	N/A	295	282	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  
                    Query_5269   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCA  93
V  95.6% (282/295)  IGHV5-51*01  2    ........................................C.......................................AG........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  T  G  L  E  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  
                    Query_5269   94   GTTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGTGGATGGGGATCATCTTTCCGGATGACTCTGATACCAGATACA  183
V  95.6% (282/295)  IGHV5-51*01  92   .C..................................A..........................A...T.G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_5269   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACA  273
V  95.6% (282/295)  IGHV5-51*01  182  ................................................G.....................C...................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                           
                                      T  A  K  Y  Y  C  V  R  Q  S  S  D  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_5269   274  CCGCCAAGTATTATTGTGTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  362
V  95.6% (282/295)  IGHV5-51*01  272  ......T......C....C......----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                   
J  100.0% (42/42)   IGHJ6*02     15   -----------------------------------------------..........................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_117357

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD2-21*02                                                                                           16.1    2.2   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTT	TTGGGGTGCTGACT	TCAA	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTTTGGGGTGCTGACTTCAAACTCCTTTGACTAC	ARAFGVLTSNSFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  R  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5270   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGAGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.2% (243/250)  IGHV4-31*03  49   ............................................T....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_5270   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  97.2% (243/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  G  T  A  A  D  T  A  L  Y  Y  C  A  R  A  F  G  V  L  T  S 
                    Query_5270   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGGGACTGCCGCGGACACGGCCTTGTATTACTGTGCGAGAGCTTTTGGGGTGCTGACTTCA  270
V  97.2% (243/250)  IGHV4-31*03  229  ...............................T...................G..................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  85.7% (12/14)    IGHD2-21*02  7    -------------------------------------------------------------------------...T....G.....---  20

                                      -------------->                                  
                                       N  S  F  D  Y  W  G  Q  G  T  L  V  T  F  S  S  
                    Query_5270   271  AACTCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCTTCTCCTCAG  319
J  95.8% (46/48)    IGHJ4*02     1    -...A..................................G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_117351

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           308     4e-86
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTGG	AGCAGTGGCTGGT	CGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTGGAGCAGTGGCTGGTCGGTTTGACTTC	AREGGAVAGRFDF	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	224	27	0	89.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  R  G  S  V  S  S  G  G  Y  H  W  S  W  I  R  Q  T  P  G  R  G 
                    Query_5271   1    ACCCTGTCCCTCACCTGCTCTGTCTCTCGTGGCTCCGTCAGCAGTGGGGGTTATCACTGGTCCTGGATCCGGCAGACCCCAGGCAGGGGA  90
V  89.2% (224/251)  IGHV4-61*08  49   ..................A........G...................T.....CT.....AG.............C.......G.A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  F  T  G  T  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  A  D  M  S 
                    Query_5271   91   CTGGAGTGGATTGGCTATATCCACTTCACTGGGACCACCAAGTACAACCCCTCCCTTAAGAGTCGAGTCAGCATATCAGCAGACATGTCC  180
V  89.2% (224/251)  IGHV4-61*08  139  ..............G......T.T.A..G.....G......C..............C.............C........T.....C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  A  V  A  G 
                    Query_5271   181  AAGAACCAATTCTCCCTGAACCTGAGGTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTGCGAGAGAGGGTGGAGCAGTGGCTGGT  270
V  89.2% (224/251)  IGHV4-61*08  229  ........G...........G.....C..........................G..T..C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD6-19*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------->                                  
                                       R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5271   271  CGGTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02     6    ---.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_117353

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           332     3e-93
IGHD4-4*01                                                                                            18.0    0.59 
IGHJ5*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-4*01	IGHJ5*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGGCA	TGACTACAG	AAAAGGGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGGCATGACTACAGAAAAGGGGACTGGTTCGACTCC	REEGMTTEKGTGSTP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	26	27	26	0	1	96.3
CDR1-IMGT	27	56	30	30	0	0	100
FR2-IMGT	57	107	51	48	3	0	94.1
CDR2-IMGT	108	128	21	18	3	0	85.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	250	233	16	1	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L   P  A  L  S  L  V  A  P  S  A  V  V  V  T  T  G  A  G  S  A  S  T  Q  G  R  A
                    Query_5272   1    ACCCTGTCCCT-ACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGGGCTGGATCCGCCAGCACCCAGGGAAGGGC  89
V  93.2% (233/250)  IGHV4-31*03  49   ...........C................................................A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                        W  S  G  L  A  S  S  T  I  V  G  P  P  T  T  T  R  P  S  *  V  E  L  V  Y  Q  W  T  R  L
                    Query_5272   90   CTGGAGTGGATTGGCTTCATCTACTATAGTGGGACCACCTACTACAACCCGTCCCTCATGAGTCGAGTTAGTTTATCAGTGGACACGTCT  179
V  93.2% (233/250)  IGHV4-31*03  139  ..............G.A......T..C.......G.......................A...........CCA.......A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                        R  T  S  S  P  *  G  *  P  P  *  L  P  R  T  R  P  F  I  I  V  R  E  E  G  M  T  T  E  K
                    Query_5272   180  AAGAACCAGTTCTCCCTGAGGCTGACCTCCGTGACTGCCGCGGACACGGCCGTTTATTATTGTGCGAGAGGAGGGCATGACTACAGAAAA  269
V  93.2% (233/250)  IGHV4-31*03  229  ...................A.....G...T.......................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD4-4*01   1    -----------------------------------------------------------------------------.........----  9

                                      ----------------->                                  
                                        G  T  G  S  T  P  G  A  R  E  P  W  S  P  S  L  Q 
                    Query_5272   270  GGGGACTGGTTCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  321
J  95.8% (46/48)    IGHJ5*01     4    ----......................A....................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_303624

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            283     1e-78
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GAATGAACCCTGAATT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATGAACCCTGAATTC	ARGMNPEF	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	40	11	0	78.4
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	215	34	0	86.3


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  I  F  R  G  H  W  M  T  W  I  R  H  L  P  D  K  G  L  
                    Query_5273  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTCGTGGCCACTGGATGACTTGGATTCGCCACCTTCCAGATAAGGGGCTGC  90
V  86.3% (215/249)  IGHV3-7*01  47   ....................................C....A..A..T.T.......GC...G.C.....GGC.....GG.........G  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     Q  W  V  A  N  I  K  D  D  G  S  E  E  H  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5273  91   AGTGGGTGGCCAATATAAAGGACGATGGAAGTGAAGAGCACTATGGTGACTCTGTGAAGGGCCGATTCACCATCTCCCGAGACAACGCCC  180
V  86.3% (215/249)  IGHV3-7*01  137  .............C......C.A...........GA.AT......TG..............................A...........A  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                     Q  N  S  L  F  L  Q  M  N  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  M  N  P  E  F  W  
                    Query_5273  181  AGAACTCTCTGTTTTTGCAGATGAACAACCTGAGAGTCGAAGACACGGCTGTATATTACTGTGCGAGAGGAATGAACCCTGAATTCTGGG  270
V  86.3% (215/249)  IGHV3-7*01  227  .......A....A.C....A.......G........C...G...........G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  94.3% (33/35)    IGHJ4*02    14   -------------------------------------------------------------------------------------.....  18

                                                                   
                                     G  Q  G  T  L  V  I  V  S  S  
                    Query_5273  271  GCCAGGGAACCCTGGTCATCGTCTCGTCAG  300
J  94.3% (33/35)    IGHJ4*02    19   ..................C......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_117359

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           199     3e-53
IGHD3-16*01                                                                                           25.7    0.003
IGHJ3*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACCTAT	GTTTGGGGGAGTT	TACGCCGCAATCACGATTGCCTTAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACCTATGTTTGGGGGAGTTTACGCCGCAATCACGATTGCCTTACTGTC	ARGLLIEDPTYVWGSLRRNHDCLTV	240	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	35	16	0	68.6
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	87	27	0	76.3
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	185	58	0	76.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  V  R  Q  P  P  G  G  G  L  Q  
                    Query_5274   4    CCCTGAGACTCTCCTGCACTGTGTCTGGTGACTCCATCGGAACTTACTACTGGCACTGGGTGCGGCAACCTCCAGGGGGGGGTCTGCAGT  93
V  76.1% (185/243)  IGHV4-59*01  50   .....TCC...A..........C.......G.......A.T.G..........AG....A.C.....G..C......AA...A...G...  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  A  M  F  L  S  T  G  T  T  L  Y  N  P  S  V  R  G  R  V  T  V  S  G  D  M  S  R  N  
                    Query_5274   94   GGCTTGCCATGTTCTTATCCACTGGGACCACCCTCTACAACCCCTCCGTCAGGGGTCGTGTCACCGTGTCGGGCGACATGTCTCGGAATC  183
V  76.1% (185/243)  IGHV4-59*01  140  ..A...GGTATA...AT.A..G.....G....AA.............C...A.A....A......A.A..A.TA....C...CAA...C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------------------C
                                      Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y  
                    Query_5274   184  AGTTGTCCCTCAACCTCATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACCTATG  273
V  76.1% (185/243)  IGHV4-59*01  230  ....C.....G..G..G.G.TC......................GTG....A...........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (13/13)   IGHD3-16*01  14   -----------------------------------------------------------------------------------------.  14

                                      DR3-IMGT-------------------------------->                                  
                                      V  W  G  S  L  R  R  N  H  D  C  L  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_5274   274  TTTGGGGGAGTTTACGCCGCAATCACGATTGCCTTACTGTCTGGGGCCAGGGGACACCGGTCACCGTCTCTTCAG  348
D  100.0% (13/13)   IGHD3-16*01  15   ............---------------------------------------------------------------  26
J  92.1% (35/38)    IGHJ3*01     13   -------------------------------------............A......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_79571

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     2e-87
IGHD5-12*01                                                                                           14.1    8.7  
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGAGTCG	GTGGCTA	TT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGAGTCGGTGGCTATTACAACTGGTTCGACCCC	ARRVGGYYNWFDP	261	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	43	8	0	84.3
CDR2-IMGT	126	146	21	16	5	0	76.2
FR3-IMGT	147	260	114	100	14	0	87.7
CDR3-IMGT (germline)	261	266	6	6	0	0	100
Total	N/A	N/A	266	233	33	0	87.6


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  F  R  N  Y  Y  Y  S  W  I  R  
                    Query_5275   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACGTGCACGGTCTCTGGTGGCTCCTTCAGAAATTACTACTACAGTTGGATTCGGC  90
V  87.6% (233/266)  IGHV4-59*01  26   ................T....................C.....T...............A....T.G........GG..C.....C....  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  S  P  G  R  G  L  E  W  I  G  H  I  Y  F  T  G  G  T  K  Y  N  P  S  F  K  S  R  V  S  
                    Query_5275   91   AGTCCCCAGGGAGGGGACTGGAGTGGATTGGACATATTTATTTTACTGGGGGCACCAAGTATAACCCCTCCTTCAAAAGTCGAGTCTCCA  180
V  87.6% (233/266)  IGHV4-59*01  116  ..C.........A..................GT....C....AC.G....A.......C..C.........C....G.........A...  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  A  S  K  N  Q  F  S  L  T  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  
                    Query_5275   181  TCTCAGTGGACGCGTCGAAGAACCAGTTCTCCCTGACTCTAAACTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAAGAG  270
V  87.6% (233/266)  IGHV4-59*01  206  .A.....A...A....C...................AG..G.G...........................G...............----  291
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -----CDR3-IMGT-------------->                                  
                                      V  G  G  Y  Y  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  A  
                    Query_5275   271  TCGGTGGCTATTACAACTGGTTCGACCCCTGGGGCCAGGGAGCGCTGGTCACCGTCTCCGCAG  333
D  100.0% (7/7)     IGHD5-12*01  10   ---.......-----------------------------------------------------  16
J  94.1% (48/51)    IGHJ5*02     1    ------------.............................A.C...............T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_140132

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           274     7e-76
IGHD3-3*01                                                                                            18.0    0.56 
IGHJ4*01                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGCA	N/A	TTATTATAC	GGGGACCTATCCAC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATTATTATACGGGGACCTATCCACTTGACCAC	RGIIIRGPIHLTT	237	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	26	27	26	0	1	96.3
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	47	4	0	92.2
CDR2-IMGT	102	122	21	10	11	0	47.6
FR3-IMGT	123	236	114	101	13	0	88.6
CDR3-IMGT (germline)	237	244	8	7	1	0	87.5
Total	N/A	N/A	245	212	32	1	86.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L   P  A  L  S  L  V  T  P  S  V  V  T  P  G  V  G  S  G  S  S  Q  G  R  D  W  S
                    Query_5276   1    ACCCTGTCCCT-ACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTACTCCTGGAGTTGGATCCGGCAGTTCCCAGGGAAGGGACTGGAG  89
V  86.5% (212/245)  IGHV4-59*08  49   ...........C...................G..........A......A......C............CC...................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                        G  L  D  I  G  L  T  I  *  R  P  T  T  T  P  P  S  R  I  D  S  P  Y  Q  W  T  R  P  G  A
                    Query_5276   90   TGGATTGGATATAGGGCTCACGATATGAAGACCAACTACAACCCCTCCCTCAAGAATCGACTCACCATATCAGTGGACACGTCCAGGAGC  179
V  86.5% (212/245)  IGHV4-59*08  139  ........G....TCTA.T..AG.GG..GC.........................G....G.............A..........A..A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                        R  S  P  W  S  *  P  L  *  P  P  Q  T  R  P  Y  I  I  V  R  G  I  I  I  R  G  P  I  H  L
                    Query_5276   180  CAGGTCGCCCTGGAGTTGACCTCTGTGACCGCCGCAGACACGGCCATATATTATTGTGCGAGGCATTATTATACGGGGACCTATCCACTT  269
V  86.5% (212/245)  IGHV4-59*08  229  ...T..T.....A..C...G.........................G.G.....C........A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD3-3*01   22   -----------------------------------------------------------------.........----------------  30
J  92.5% (37/40)    IGHJ4*01     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                
                                        T  T  G  A  T  E  S  W  S  P  S  P  
                    Query_5276   270  GACCACTGGGGCCACGGAATCCTGGTCACCGTCTCCTC  307
J  92.5% (37/40)    IGHJ4*01     9    ...T..........A....C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_151401

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           346     2e-97
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGAGTTCCAAGATGGGCAAATC	TTGTAGTAGTCCCAGCTGCT	CTCG	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGAGTTCCAAGATGGGCAAATCTTGTAGTAGTCCCAGCTGCTCTCGCTAT	AKGSSKMGKSCSSPSCSRY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  T  Y  G  M  H  W  F  R  Q  A  P  G  K  G  L  
                    Query_5277   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCGGGATTCACCTTAAGTACCTATGGCATGCACTGGTTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-30*18  47   ............................T...........C....G................G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  E  S  T  K  K  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  T  S  
                    Query_5277   91   AGTGGGTGGCAGTTATATCATATGATGAAAGTACTAAAAAATATGCAGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAGACACTTCCA  180
V  94.4% (235/249)  IGHV3-30*18  137  ...........................G.....A....T.C............................C..............A.....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  S  S  K  M  G  K  
                    Query_5277   181  AGAACACGCTGTATCTGCAGATGAACGGCCTGAGAGCTGAAGACACGGCTGTCTATTACTGTGCGAAAGGGAGTTCCAAGATGGGCAAAT  270
V  94.4% (235/249)  IGHV3-30*18  227  ...................A......A.............G...........G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      S  C  S  S  P  S  C  S  R  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5277   271  CTTGTAGTAGTCCCAGCTGCTCTCGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  333
D  95.0% (19/20)    IGHD2-2*01   7    -..........A.........------------------------------------------  26
J  94.7% (36/38)    IGHJ4*02     11   -------------------------...C.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_79577

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           402     3e-114
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGATGGCCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTC	*DNQAMAGPSTVWTS	283	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	69	70	69	0	1	98.6
CDR1-IMGT	70	93	24	21	3	0	87.5
FR2-IMGT	94	144	51	49	2	0	96.1
CDR2-IMGT	145	168	24	21	3	0	87.5
FR3-IMGT	169	282	114	109	5	0	95.6
CDR3-IMGT (germline)	283	290	8	7	1	0	87.5
Total	N/A	N/A	291	276	14	1	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P   G  S  L  *  R  S  P  V  R  V  L  D  T  T  L  P  V  
                    Query_5278   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCC-GGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCAGTTA  89
V  94.8% (276/291)  IGHV5-51*01  6    ....................................C.......................................AG.........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                      T  G  S  A  G  C  A  R  C  P  G  P  A  W  S  G  W  G  S  S  F  R  M  T  L  I  P  D  T  A  
                    Query_5278   90   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGACCGGCCTGGAGTGGATGGGGATCATCTTTCCGGATGACTCTGATACCAGATACAGCCC  179
V  94.8% (276/291)  IGHV5-51*01  96   ................................AA.........................A...T.G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                      R  P  S  K  A  R  S  P  S  Q  P  T  S  P  S  P  P  P  T  C  S  G  V  A  *  R  P  R  T  P  
                    Query_5278   180  GTCCTTCCAAGGCCAGGTCCCCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  269
V  94.8% (276/291)  IGHV5-51*01  186  ...................A........................G.....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                           
                                      P  S  I  I  V  *  D  N  Q  A  M  A  G  P  S  T  V  W  T  S  G  A  K  G  P  R  S  P  S
                    Query_5278   270  CAAGTATTATTGTGTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  354
V  94.8% (276/291)  IGHV5-51*01  276  ..T......C....C......----------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                   
J  100.0% (42/42)   IGHJ6*02     15   -------------------------------------------..........................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_258215

Length=432
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           360     2e-101
IGHD3-16*01                                                                                           18.0    0.74  
IGHJ6*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCCCCCCTCAGGCCCGAGGAGG	ATGATCGCGTTTGGG	CCCCCTGGGACGCCCATACCCCCCCTCCGATTACCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCCCCCTCAGGCCCGAGGAGGATGATCGCGTTTGGGCCCCCTGGGACGCCCATACCCCCCCTCCGATTACCCACTACTCGGCTATGGAGGTC	SPLRPEEDDRVWAPWDAHTPPPITHYSAMEV	284	376	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	102	12	0	89.5
Total	N/A	N/A	282	256	26	0	90.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  G  V  K  R  P  G  A  S  V  R  V  S  C  K  A  S  A  Y  T  F  T  T  Y 
                    Query_5279   2    CAGCTGGTGCAGTCTGGAGGTGGGGTGAAGAGGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGCTTACACTTTTACCACCTAC  91
V  90.8% (256/282)  IGHV1-18*04  7    ...................C..A........A.................A....................G......C.......G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       V  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  V  K  N  G  N  T  N  Y  A  P 
                    Query_5279   92   GTGATCAGCTGGGTGCGACAGGCCCCAGGACAAGGACTTGAGTGGATGGGATGGATCAGCGTTAAGAATGGTAACACAAACTATGCACCG  181
V  90.8% (256/282)  IGHV1-18*04  97   .GT.......................T........G.........................C.T.C......................A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       E  F  Q  G  R  L  T  M  T  T  D  A  F  T  T  T  A  Y  L  D  L  T  S  L  G  S  D  D  T  A 
                    Query_5279   182  GAGTTCCAGGGCAGACTCACCATGACCACAGACGCATTCACGACCACAGCCTATCTGGACCTGACGAGCCTGGGATCTGACGACACGGCC  271
V  90.8% (256/282)  IGHV1-18*04  187  A..C...........G.................A...C.....G.........CA....G....G.......A.................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------------------------CDR3-IMGT---------------------------
                                       V  Y  Y  C  S  P  L  R  P  E  E  D  D  R  V  W  A  P  W  D  A  H  T  P  P  P  I  T  H  Y 
                    Query_5279   272  GTGTATTACTGTTCCCCCCTCAGGCCCGAGGAGGATGATCGCGTTTGGGCCCCCTGGGACGCCCATACCCCCCCTCCGATTACCCACTAC  361
V  90.8% (256/282)  IGHV1-18*04  277  ............------------------------------------------------------------------------------  288
                                       V  Y  Y  C                                                                               
D  86.7% (13/15)    IGHD3-16*01  6    ----------------------------------.....TA........-----------------------------------------  20
J  88.7% (47/53)    IGHJ6*02     10   -------------------------------------------------------------------------------------.....  14

                                      -------------->                                 
                                       S  A  M  E  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_5279   362  TCGGCTATGGAGGTCTGGGGCCAAGGAACCACGGTCATCGTCTCCTCA  409
J  88.7% (47/53)    IGHJ6*02     15   .AC.G......C..............G..........C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 42497568


Query= Query_258214

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           290     2e-80
IGHD1-26*01                                                                                           12.2    32   
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARAKGIAVIVDAFDF	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	97	17	0	85.1
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	214	29	0	88.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  A  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_5280   4    CCCTGAGACTCTCCTGCTCTGCCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAGT  93
V  88.1% (214/243)  IGHV4-59*01  50   .....TCC...A.....A...T.................G............................C....A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  V  S  V  D  M  S  N  N  
                    Query_5280   94   GGATTGGATATATCTATTACAGAGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAGACATGTCCAACAACC  183
V  88.1% (214/243)  IGHV4-59*01  140  .......G..............T....G.....A......C.....CC................CA.A..........C......G....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  K  G  I  A  V  I  V  D  
                    Query_5280   184  GGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGCGCGAGAGCTAAGGGTATCGCTGTTATAGTAGATG  273
V  88.1% (214/243)  IGHV4-59*01  230  A...........AG.................T.......CG.....G........T.......---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD1-26*01  3    -------------------------------------------------------------------------------......-----  8
J  91.8% (45/49)    IGHJ3*01     2    --------------------------------------------------------------------------------------....  5

                                      ---------->                                  
                                      A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_5280   274  CTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  318
J  91.8% (45/49)    IGHJ3*01     6    ........G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_258216

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            367     5e-104
IGHD3-22*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTG	ATTACTATGATAGTAGTGGTTA	CCCA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTGATTACTATGATAGTAGTGGTTACCCAGACTAC	EP*LL***WLPRL	239	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	238	114	112	0	2	98.2
CDR3-IMGT (germline)	239	243	5	5	0	0	100
Total	N/A	N/A	245	242	1	2	98.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_5281   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  98.8% (242/245)  IGHV4-4*02   49   ..............................................G...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_5281   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  98.8% (242/245)  IGHV4-4*02   139  ..........................................................................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A    D  G  R  V  L  L  C  E  P  *  L  L  *  *  *  W  
                    Query_5281   181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGG--ACGGCCGTGTATTACTGTGCGAGCCTTGATTACTATGATAGTAGTGGT  268
V  98.8% (242/245)  IGHV4-4*02   229  ........................................AC.......................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (22/22)   IGHD3-22*01  3    ----------------------------------------------------------------------....................  22

                                      ----------->                                  
                                      L  P  R  L  L  G  P  G  N  P  G  H  R  L  L   
                    Query_5281   269  TACCCAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  314
D  100.0% (22/22)   IGHD3-22*01  23   ..--------------------------------------------  24
J  100.0% (40/40)   IGHJ4*02     9    ------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_258211

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           357     1e-100
IGHD3-22*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTACCGGC	AGTGGTTA	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTACCGGCAGTGGTTATTTGACTAC	ARHYRQWLFDY	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  R  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  R  
                    Query_5282   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGAAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGAGGC  93
V  95.6% (239/250)  IGHV4-39*01  50   .....TCC...A............................C.............................................G...  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_5282   94   TGGAGTGGATTGGGAGTTTGTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCA  183
V  95.6% (239/250)  IGHV4-39*01  140  .................A.C......................................................................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  H  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  Q  W  L  F  
                    Query_5282   184  AGAACCACTTGTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTTTATTACTGTGCGAGACATTACCGGCAGTGGTTATTTG  273
V  95.6% (239/250)  IGHV4-39*01  230  .......G..C.........................................G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-22*01  17   ------------------------------------------------------------------------------........----  24
J  100.0% (43/43)   IGHJ4*02     6    --------------------------------------------------------------------------------------....  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5282   274  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (43/43)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_258210

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           310     1e-86
IGHD3-3*01                                                                                            10.3    117  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGACACAG	TTTTT	AGTTTCCAC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACACAGTTTTTAGTTTCCACTTCGACCCC	ARVDTVFSFHFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  W  S  W  I  R  Q  S  P  G  R  G  L  E 
                    Query_5283   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAGGGGACTGGAA  90
V  90.6% (221/244)  IGHV4-59*02  49   .............................................T.......................C.........A.........G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  A  Y  I  S  Y  S  G  R  T  K  S  N  P  S  L  K  S  R  V  T  M  S  I  D  T  S  K  N 
                    Query_5283   91   TGGCTTGCCTATATCTCTTACAGTGGGAGAACCAAGTCTAATCCCTCTCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCCAAGAAC  180
V  90.6% (221/244)  IGHV4-59*02  139  ...A...GG.......A............C.....C.AC..C.....C....................A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  V  D  T  V  F  S  F  H  F 
                    Query_5283   181  CAATTCTCCCTGAGGCTGACTTCCGTGACCGCTGCGGACACGGCCGTTTATTTCTGTGCGAGAGTGGACACAGTTTTTAGTTTCCACTTC  270
V  90.6% (221/244)  IGHV4-59*02  229  ..G..........A.....GC..T.......................G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-3*01   10   -------------------------------------------------------------------------.....------------  14
J  97.7% (42/43)    IGHJ5*02     9    ---------------------------------------------------------------------------------------...  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5283   271  GACCCCTGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  310
J  97.7% (42/43)    IGHJ5*02     12   ....................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_258213

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           12.2    30   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGACGGGT	TGGCTG	CCC	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGACGGGTTGGCTGCCCGACGAC	ARGTGWLPDD	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  Y  C  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5284   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTACTACTGCAACTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  93.9% (229/244)  IGHV4-59*01  49   ...............................G..........A..........G.G..................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  N  T  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5284   91   TGGATTGGACATATCTACAACACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  93.9% (229/244)  IGHV4-59*01  139  ........GT.......TT...G.....G.............................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  T  G  W  L  P  D  D  W 
                    Query_5284   181  CAGTTCTCCTTGAACCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGACGGGTTGGCTGCCCGACGACTGG  270
V  93.9% (229/244)  IGHV4-59*01  229  .........C....G....G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  12   ------------------------------------------------------------------------......------------  17
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------...T.....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_5284   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.5% (39/40)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_258212

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           336     1e-94
IGHD5-12*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGAACGTAGAAT	TGGCTAC	AATCCTAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGAACGTAGAATTGGCTACAATCCTAATTGACTAC	ARANVELATILIDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  Y  G  M  V  W  V  R  Q  A  P  G  K  G  L  
                    Query_5285   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACCTTCAGTTACTATGGCATGGTCTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-30*03  47   ............................T...............AG..........CA................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  D  G  T  K  I  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5285   91   AGTGGGTGGCACTTATATCATATGATGGAACCAAAATATTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  93.2% (232/249)  IGHV3-30*03  137  ...........G..................GT..T.A..A.............................................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  E  M  N  S  L  R  I  E  D  T  A  V  H  Y  C  A  R  A  N  V  E  L  A  T  
                    Query_5285   181  AGAACACGCTGTATCTGGAAATGAACAGCCTGAGAATTGAGGACACGGCTGTTCATTACTGTGCGAGAGCGAACGTAGAATTGGCTACAA  270
V  93.2% (232/249)  IGHV3-30*03  227  .................C.................GC...............GT...............---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD5-12*01  11   ---------------------------------------------------------------------------------.......--  17

                                      ------------->                                  
                                      I  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5285   271  TCCTAATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (42/42)   IGHJ4*02     7    ------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_61069

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AGCCTTTCACA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGAAGCCTTTCACATTGACTAC	GREAFHIDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  R  S  S  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5286   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGGAGTTCTAGCATGACCTGGGTCCGCCAGGCTCCGGGGAAGGGACTGG  90
V  92.0% (230/250)  IGHV3-21*01  47   ....................................C......T..C.A........A..................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  N  S  A  S  N  F  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_5286   91   AGTGGGTCTCATCCATTAATAGTGCTAGTAATTTCATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  92.0% (230/250)  IGHV3-21*01  137  ..................G....AG.....G..A....................................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  V  F  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  F  C  G  R  E  A  F  H  I  D  Y  
                    Query_5286   181  AGAACTCAGTCTTTCTGCAGATGAGCAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGGGAGAGAAGCCTTTCACATTGACTACT  270
V  92.0% (230/250)  IGHV3-21*01  227  ........C.G.A......A....A................................A.....C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------------.........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5286   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (42/42)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_27626

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           310     1e-86
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GATCTGGGTCCCGGATTGGCT	GGGGAGTT	CGCGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTGGGTCCCGGATTGGCTGGGGAGTTCGCGCCTACTTTGACTAC	ARSGSRIGWGVRAYFDY	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	50	1	0	98
CDR2-IMGT	102	125	24	18	6	0	75
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	243	4	4	0	0	100
Total	N/A	N/A	228	213	15	0	93.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  N  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I  
                    Query_5287   16   GTGCAGCCTCTGGGTTCACCTTTAACAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAACTATTA  105
V  93.4% (213/228)  IGHV3-23*01  65   .............A..........G...C......................................................G......  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      T  T  S  G  V  S  T  D  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_5287   106  CTACTAGTGGTGTTTCCACAGACTCCGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACTCTGTATCTGC  195
V  93.4% (213/228)  IGHV3-23*01  155  G.GG........G.AG....T...A......................................................G..........  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------------CDR3-IMGT----------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  S  C  A  R  S  G  S  R  I  G  W  G  V  R  A  Y  F  
                    Query_5287   196  AAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTCCTGTGCGAGATCTGGGTCCCGGATTGGCTGGGGAGTTCGCGCCTACTTTG  285
V  93.4% (213/228)  IGHV3-23*01  245  ..................................A....A........------------------------------------------  292
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (8/8)     IGHD3-10*01  16   ---------------------------------------------------------------------........-------------  23
J  100.0% (47/47)   IGHJ4*02     2    ----------------------------------------------------------------------------------........  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5287   286  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (47/47)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_343780

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           378     3e-107
IGHD3-22*01                                                                                           46.8    1e-09 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTACTATGATAGTAGTGGTTATTA	T	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACTATGATAGTAGTGGTTATTATTACTACGGTATGGATGTC	ARDYYDSSGYYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5288   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-48*03  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5288   91   AGTGGGTTTCATATATTAGTAGTAGTGGTAGTACCATAAAGTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-48*03  137  .............C........................T.C..C..............................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  Y  D  S  S  G  
                    Query_5288   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATTACTATGATAGTAGTGGTT  270
V  98.4% (246/250)  IGHV3-48*03  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (24/24)   IGHD3-22*01  4    ----------------------------------------------------------------------....................  23

                                      GT-------------------->                                 
                                      Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5288   271  ATTATTACTACGGTATGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
D  100.0% (24/24)   IGHD3-22*01  24   ....----------------------------------------------------  27
J  98.0% (50/51)    IGHJ6*02     12   -----..............C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_258218

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           341     5e-96
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGACC	TACGATTTTTGGAG	GGACCAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGACCTACGATTTTTGGAGGGACCAGTACTACGCTATGGACGTC	ARVTYDFWRDQYYAMDV	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  R  T  V  S  G  A  S  I  T  T  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_5289   1    ACCCTGTCCCTCACCCGCACTGTCTCTGGTGCCTCCATCACCACTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.0% (233/248)  IGHV4-39*01  49   ...............T...............G........G..G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  V  Y  Y  I  G  S  T  Y  Y  N  P  S  L  R  R  R  V  T  I  S  V  D  T  S 
                    Query_5289   91   CTGGAATGGATTGGGACTGTCTATTATATTGGGAGCACCTACTACAACCCGTCCCTCAGGAGGCGAGTCACCATATCCGTGGACACGTCC  180
V  94.0% (233/248)  IGHV4-39*01  139  .....G..........G.A.........G.............................A...T.................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  R  L  S  S  L  T  A  A  D  T  A  V  Y  H  C  A  R  V  T  Y  D  F  W  R 
                    Query_5289   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTTTGACCGCCGCAGACACGGCTGTCTATCACTGTGCGAGGGTGACCTACGATTTTTGGAGG  270
V  94.0% (233/248)  IGHV4-39*01  229  ...................A..........G......................G...T..........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (14/14)   IGHD3-3*01   5    ---------------------------------------------------------------------------..............-  18

                                      MGT-------------------->                                 
                                       D  Q  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_5289   271  GACCAGTACTACGCTATGGACGTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  327
J  94.1% (48/51)    IGHJ6*02     12   ------.......G..................A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_343782

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            427     9e-122
IGHD2-21*02                                                                                           14.1    9.1   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TC	GGTGGTAACT	CCATGAGGTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTCGGTGGTAACTCCATGAGGTATGGTATGGACGTC	ARVGGNSMRYGMDV	273	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	30	0	0	100
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	111	3	0	97.4
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	276	3	0	98.9


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  
                    Query_5290   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGA  90
V  98.9% (276/279)  IGHV6-1*01   26   ..........................................................................................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_5290   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.9% (276/279)  IGHV6-1*01   116  ..........................................................................................  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  I  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  K  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_5290   181  GTCGAATAATCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAACTGAAGTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.9% (276/279)  IGHV6-1*01   206  .........C.......................................G.....C..................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------------CDR3-IMGT--------------->                                 
                                      C  A  R  V  G  G  N  S  M  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5290   271  GTGCAAGAGTCGGTGGTAACTCCATGAGGTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  347
V  98.9% (276/279)  IGHV6-1*01   296  .........--------------------------------------------------------------------  304
                                      C  A  R                                                                      
D  90.0% (9/10)     IGHD2-21*02  11   -----------......G...--------------------------------------------------------  20
J  100.0% (45/45)   IGHJ6*02     18   --------------------------------.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_287831

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-13*01                                                                                           369     2e-104
IGHJ2*01                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-13*01	N/A	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	CCCCTTTAGGTG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCCCCTTTAGGTGACTGGTACTTCGATCTC	ARAPLGDWYFDL	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	241	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  D  M  H  W  V  R  Q  A  T  G  K  G  L  
                    Query_5291   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTCCTACGACATGCACTGGGTCCGCCAAGCTACAGGAAAAGGTCTGG  90
V  98.0% (241/246)  IGHV3-13*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  D  M  H  W  V  R  Q  A  T  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  A  T  A  G  D  T  Y  Y  P  G  S  V  K  G  R  F  T  I  S  R  E  S  A  K  
                    Query_5291   91   AGTGGGTCTCAGCTATTGCTACTGCTGGTGACACATACTATCCAGGCTCCGTGAAGGGCCGATTCACCATCTCCAGAGAAAGTGCCAAGA  180
V  98.0% (241/246)  IGHV3-13*01  137  ..................G..............................................................A........  226
                                      E  W  V  S  A  I  G  T  A  G  D  T  Y  Y  P  G  S  V  K  G  R  F  T  I  S  R  E  N  A  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  S  L  Y  L  Q  I  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R  A  P  L  G  D  W  Y  F  
                    Query_5291   181  ACTCCTTGTATCTTCAAATAAACAGCCTGAGAGCCGGGGACACGGCTGTGTATTACTGTGCAAGAGCCCCTTTAGGTGACTGGTACTTCG  270
V  98.0% (241/246)  IGHV3-13*01  227  ...................G..............................................------------------------  292
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R                          
J  98.0% (50/51)    IGHJ2*01     3    ------------------------------------------------------------------------------............  14

                                      ---->                                  
                                      D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_5291   271  ATCTCTGGGGCCGTGGCACCCTGGTCACAGTCTCCTCAG  309
J  98.0% (50/51)    IGHJ2*01     15   ............................T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_287830

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*06                                                                                           302     3e-84
IGHD3-9*01                                                                                            14.1    8.4  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*06	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGTTTCCCATGGCT	ACTGGTCATT	GACTCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGTTTCCCATGGCTACTGGTCATTGACTCTTTTGACTCC	AKDRFPWLLVIDSFDS	239	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	47	4	0	92.2
CDR2-IMGT	101	124	24	18	6	0	75
FR3-IMGT	125	238	114	107	7	0	93.9
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	233	213	20	0	91.4


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  G  S  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I 
                    Query_5292   14   TGTGCAGCGTCTGGATTCACCTTCGGCAGTTATGGCATGAACTGGGTCCGCCAGGCACCAGGCAAGGGGTTGGAGTGGGTGGCACTTATT  103
V  91.4% (213/233)  IGHV3-33*06  64   ........................A.T..C.........C................T............C..............G....A  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       W  A  D  G  T  K  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  I  V  Y  L 
                    Query_5292   104  TGGGCTGATGGAACTAAGACATACTATGCAGAGTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACATTGTGTATCTG  193
V  91.4% (213/233)  IGHV3-33*06  154  ...TA........G...T.A............C..............................................CGC........  243
                                       W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       Q  M  D  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  R  F  P  W  L  L  V  I  D  S  F  D 
                    Query_5292   194  CAAATGGACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAAAGATCGTTTCCCATGGCTACTGGTCATTGACTCTTTTGAC  283
V  91.4% (213/233)  IGHV3-33*06  244  ......A................G...........G.................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  90.0% (9/10)     IGHD3-9*01   17   --------------------------------------------------------------------......T...------------  26
J  93.0% (40/43)    IGHJ4*02     6    ------------------------------------------------------------------------------------......  11

                                      -->                                  
                                       S  W  G  Q  G  A  L  V  S  V  S  S  
                    Query_5292   284  TCCTGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  320
J  93.0% (40/43)    IGHJ4*02     12   .A.............A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_287832

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ATTTCT	TATGGTTCGGGGAGT	CACGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAATTTCTTATGGTTCGGGGAGTCACGGGTGGTTCGACCCC	ARISYGSGSHGWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  K  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5293   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAAATACTTCTGGAGTTGGATCCGTCAGCCCCCCGGGAAGGGCCTGGAG  90
V  90.9% (221/243)  IGHV4-59*01  49   ...............................G.........T.GT....A......C........G........A........A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  I  G  T  T  S  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5293   91   TGGATTGGTTACATCTATTACATTGGGACCACCAGCTACAACCCCTCCCTCGAGAGTCGCGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  90.9% (221/243)  IGHV4-59*01  139  ........G..T..........G.....G.....A................A.......A..............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  R  A  M  Y  Y  C  A  R  I  S  Y  G  S  G  S  H  G 
                    Query_5293   181  CAGTTCTCCCTGAAGCTAACGTCTGTGACCGCTGCGGACAGGGCCATGTATTACTGTGCGCGAATTTCTTATGGTTCGGGGAGTCACGGG  270
V  90.9% (221/243)  IGHV4-59*01  229  .................G.GC...................C....G..............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (15/15)   IGHD3-10*01  8    ---------------------------------------------------------------------...............------  22

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5293   271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (46/46)   IGHJ5*02     6    ..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_287835

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            276     3e-76
IGHD6-13*01                                                                                           14.1    8.4  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAGGAC	TAGCACCACCTGG	AGCGGGAACAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGACTAGCACCACCTGGAGCGGGAACATACAACTGGTTCGACCCC	ARLGLAPPGAGTYNWFDP	236	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	20	22	3	3	0	0	100
CDR1-IMGT	23	46	24	17	7	0	70.8
FR2-IMGT	47	97	51	49	2	0	96.1
CDR2-IMGT	98	121	24	19	5	0	79.2
FR3-IMGT	122	235	114	105	9	0	92.1
CDR3-IMGT (germline)	236	241	6	6	0	0	100
Total	N/A	N/A	222	199	23	0	89.6


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  L  R  F  S  S  I  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  H  I  N  Q  D 
                    Query_5294   20   TCTGGACTCAGGTTCAGTAGTATTTGGATGAGCTGGGTCCGCCAGGCTCCTGGGAAGGGGCTGGAGTGGGTGGCCCACATAAATCAAGAT  109
V  89.6% (199/222)  IGHV3-7*01   73   ......T...CC..T.....CTA...........................A........................A.......G......  162
                                       S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  K  Q  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       A  S  D  H  Y  Y  L  D  S  V  K  G  R  F  T  V  S  R  D  N  A  K  S  S  V  F  L  Q  M  N 
                    Query_5294   110  GCAAGTGACCACTACTATCTGGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCAAGAGTTCAGTGTTTCTGCAAATGAAC  199
V  89.6% (199/222)  IGHV3-7*01   163  .G......GA.A......G..........................A.....................AC...C...A.............  252
                                       G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><----------------------CDR3-IMGT--------------------->
                                       S  L  T  A  E  D  T  A  V  Y  Y  C  A  R  L  G  L  A  P  P  G  A  G  T  Y  N  W  F  D  P 
                    Query_5294   200  AGCCTGACAGCCGAAGACACGGCTGTTTATTACTGTGCGAGACTAGGACTAGCACCACCTGGAGCGGGAACATACAACTGGTTCGACCCC  289
V  89.6% (199/222)  IGHV3-7*01   253  .......G......G...........G...............------------------------------------------------  294
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  84.6% (11/13)    IGHD6-13*01  6    -------------------------------------------------.....G..G....----------------------------  18
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------.................  17

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5294   290  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  323
J  100.0% (51/51)   IGHJ5*02     18   ..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_287834

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           367     6e-104
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCACCCAA	TATGGTTCGGAGAGT	CTG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCACCCAATATGGTTCGGAGAGTCTG	ARATQYGSESL	289	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	74	1	0	98.7
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	46	5	0	90.2
CDR2-IMGT	151	174	24	17	7	0	70.8
FR3-IMGT	175	288	114	100	14	0	87.7
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	265	30	0	89.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_5295   1    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACT  90
V  89.8% (265/295)  IGHV1-18*01  1    .......................................................A.................................C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  V  S  W  V  R  Q  A  P  G  G  G  L  E  W  M  G  W  S  G  P  N  N  D  D  A  H  Y 
                    Query_5295   91   TCCTATGGTGTCAGCTGGGTGCGCCAGGCCCCTGGAGGAGGGCTTGAATGGATGGGATGGAGCGGCCCTAACAATGATGACGCACACTAT  180
V  89.8% (265/295)  IGHV1-18*01  91   AG.......A.............A............CA.........G.............T.A..G..T......G.A..A..A.....  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       G  H  S  L  R  G  R  V  T  I  T  T  D  T  S  T  T  T  S  F  M  E  L  R  S  L  R  S  A  D 
                    Query_5295   181  GGACATAGCCTCCGGGGCAGAGTCACCATTACCACAGACACATCAACGACCACATCCTTCATGGAGTTGAGGAGCCTGAGATCTGCCGAC  270
V  89.8% (265/295)  IGHV1-18*01  181  .C...G.AG....A...............G..............C....G....G...A.......C..................A....  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------CDR3-IMGT----------->                                  
                                       T  A  V  Y  Y  C  A  R  A  T  Q  Y  G  S  E  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5295   271  ACGGCCGTATATTACTGTGCGAGAGCCACCCAATATGGTTCGGAGAGTCTGTGGGGCCAGGGAACCCTGGTCACAGTCTCCTCAG  355
V  89.8% (265/295)  IGHV1-18*01  271  ........G................------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                              
D  93.3% (14/15)    IGHD3-10*01  8    ---------------------------------..........G....-------------------------------------  22
J  97.1% (33/34)    IGHJ4*02     15   ---------------------------------------------------.......................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_302578

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           363     1e-102
IGHD2-2*03                                                                                            12.2    33    
IGHJ5*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-2*03	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATTCCC	TGGATTTTG	GTTCCCCCTTAGATCAA	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATTCCCTGGATTTTGGTTCCCCCTTAGATCAAAACTGGTTCGACCCC	ARNSLDFGSPLDQNWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5296   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (240/248)  IGHV3-48*03  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  G  S  S  T  M  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5296   91   AGTGGGTTTCATACATCAGTAGTGGTTCTAGTACCATGTACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (240/248)  IGHV3-48*03  137  ................T......A..GG.........A....................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  N  S  L  D  F  G  S  
                    Query_5296   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTACTTCTGTGCGAGAAATTCCCTGGATTTTGGTTCCC  270
V  96.8% (240/248)  IGHV3-48*03  227  ............A..........................................T.A..........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD2-2*03   1    ---------------------------------------------------------------------------.....A...------  9

                                      IMGT--------------------->                                  
                                      P  L  D  Q  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5296   271  CCTTAGATCAAAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
J  100.0% (49/49)   IGHJ5*02     3    -----------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_224494

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           434     4e-124
IGHD1-1*01                                                                                            10.3    140   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGTTCAG	CAACT	CCCGGGGGGGTCCCCGTCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGTTCAGCAACTCCCGGGGGGGTCCCCGTCTCCCTGACTCC	ARDLFSNSRGGPRLPDS	292	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	111	3	0	97.4
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	287	9	0	97


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  Q  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_5297   4    CAGATGCAGCTGGTGCAGTCTGGGGCTCAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACC  93
V  97.0% (287/296)  IGHV1-46*01  1    ...G.......................G..............................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  Y  I  H  W  A  R  Q  A  P  R  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  T  Y 
                    Query_5297   94   AGTTACTATATACACTGGGCGCGACAGGCCCCTAGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAACCTAC  183
V  97.0% (287/296)  IGHV1-46*01  91   ..C........G.......T.............G...................................................G....  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  K  S  E  D 
                    Query_5297   184  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTGTACATGGAGCTGAGCAGCCTGAAATCTGAGGAC  273
V  97.0% (287/296)  IGHV1-46*01  181  ........................................................C......................G..........  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------------CDR3-IMGT-------------------->                     
                                       T  A  V  Y  Y  C  A  R  D  L  F  S  N  S  R  G  G  P  R  L  P  D  S  W  G  Q  G  T  L  V 
                    Query_5297   274  ACGGCCGTGTATTACTGTGCGAGAGATCTGTTCAGCAACTCCCGGGGGGGTCCCCGTCTCCCTGACTCCTGGGGCCAGGGAACCCTGGTC  363
V  97.0% (287/296)  IGHV1-46*01  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD1-1*01   5    -----------------------------------.....--------------------------------------------------  9
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------.....A......................  35

                                                   
                                       T  V  S  S  
                    Query_5297   364  ACCGTCTCCTCAG  376
J  97.6% (40/41)    IGHJ4*02     36   .............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_224495

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD1-26*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCGA	TATACTGGGAGCTAC	CGAC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCGATATACTGGGAGCTACCGACATGCTTTTGATATC	ARFRYTGSYRHAFDI	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	226	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_5298   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.4% (226/242)  IGHV4-59*01  50   .....TCC...A....C.....................A...G...........G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N  
                    Query_5298   94   GGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACC  183
V  93.4% (226/242)  IGHV4-59*01  140  .......G..................A...............C...................................C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  R  Y  T  G  S  Y  R  H  
                    Query_5298   184  AGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGATTCCGATATACTGGGAGCTACCGACATG  273
V  93.4% (226/242)  IGHV4-59*01  230  ........C....G.....C..........................G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  93.3% (14/15)    IGHD1-26*01  3    --------------------------------------------------------------------....G..........-------  17
J  97.8% (44/45)    IGHJ3*02     3    ---------------------------------------------------------------------------------------...  5

                                      ---------->                               
                                      A  F  D  I  W  S  Q  G  T  M  V  T  V  S  
                    Query_5298   274  CTTTTGATATCTGGAGCCAAGGGACAATGGTCACCGTCTCTT  315
J  97.8% (44/45)    IGHJ3*02     6    ..............G...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_224496

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           344     6e-97
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGG	AGCAGCAGCTGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGGAGCAGCAGCTGGTTGACTAC	ARDLEQQLVDY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	24	17	4	3	70.8
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	250	237	10	3	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5299   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCAGTAGTTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-21*01  47   ............................T.................C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  T  T  T     Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5299   91   AGTGGGTCTCATCCATTAGCACTACTACT---TACATATACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  177
V  94.8% (237/250)  IGHV3-21*01  137  ...................T.G..G..G.AGT..............A...........................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  E  Q  Q  L  V  
                    Query_5299   178  AGAACTCAGTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGGAGCAGCAGCTGGTTG  267
V  94.8% (237/250)  IGHV3-21*01  227  ........C.....C.......................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD6-13*01  7    ---------------------------------------------------------------------------............---  18
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5299   268  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (42/42)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_49558

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            318     6e-89
IGHD3-10*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGAC	TGGTTCGGGGA	CTT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTAC	ARVTGSGTYSFDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	30	17	17	0	0	100
CDR1-IMGT	31	54	24	22	2	0	91.7
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	129	24	22	2	0	91.7
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	237	220	17	0	92.8


Alignments

                                      <---FR1-IMGT----><-------CDR1-IMGT------><--------------------FR2-IMGT--------------------
                                         S  C  K  A  S  G  Y  T  F  G  S  Y  D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  
                    Query_5300   14   TCTCCTGCAAGGCTTCTGGATACACCTTCGGCAGCTATGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAT  103
V  92.8% (220/237)  IGHV1-8*02   59   .............................AC...............................A...........................  148
                                         S  C  K  A  S  G  Y  T  F  T  S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  

                                      -><-------CDR2-IMGT------><----------------------------------------------------FR3-IMGT---
                                      W  M  N  P  N  S  G  N  T  D  Y  A  Q  K  F  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  
                    Query_5300   104  GGATGAATCCTAACAGTGGGAACACAGACTATGCACAGAAGTTCCGGGGCAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCT  193
V  92.8% (220/237)  IGHV1-8*02   149  .......C...........T.......G.................A.......................A...C..C.T...........  238
                                      W  M  N  P  N  S  G  N  T  G  Y  A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  

                                      -------------------------------------------------><--------------CDR3-IMGT--------------> 
                                      Y  M  E  L  S  S  L  G  S  A  D  T  A  V  Y  Y  C  A  R  V  T  G  S  G  T  Y  S  F  D  Y  
                    Query_5300   194  ACATGGAGCTGAGTAGTCTGGGATCTGCCGACACGGCCGTCTATTACTGTGCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTACT  283
V  92.8% (220/237)  IGHV1-8*02   239  .............C..C...A......AG...........G................---------------------------------  295
                                      Y  M  E  L  S  S  L  R  S  E  D  T  A  V  Y  Y  C  A  R                                   
D  100.0% (11/11)   IGHD3-10*01  10   -------------------------------------------------------------...........------------------  20
J  95.8% (46/48)    IGHJ4*02     1    ---------------------------------------------------------------------------...A......C....  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5300   284  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.8% (46/48)    IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_224490

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHD1-1*01                                                                                            14.1    8.8  
IGHJ2*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-1*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AATCCTCCTTCGAAGGGACCAAGGC	CAACTGG	CCGGG	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAAATCCTCCTTCGAAGGGACCAAGGCCAACTGGCCGGGTGGTACTTCGATCTC	VREILLRRDQGQLAGWYFDL	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  D  F  S  G  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5301   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGCTTCGACTTCAGTGGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-21*01  47   .....................C.........A...AC.......A.C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  G  N  T  Y  I  F  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_5301   91   AGTGGGTCTCATCCATTAGTAGTGGGAATACTTACATTTTCTACGCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  92.0% (230/250)  IGHV3-21*01  137  .......................A.T.G..G......A.A...............................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  S  L  Q  M  S  G  L  R  A  D  D  T  A  V  Y  Y  C  V  R  E  I  L  L  R  R  D  
                    Query_5301   181  AGAACTCACTGTCTCTACAAATGAGCGGCCTGAGAGCCGACGACACGGCTGTATATTACTGTGTGAGAGAAATCCTCCTTCGAAGGGACC  270
V  92.0% (230/250)  IGHV3-21*01  227  ............A...G.......A.A.............G...........G..........C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      Q  G  Q  L  A  G  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_5301   271  AAGGCCAACTGGCCGGGTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCCTCAG  336
D  100.0% (7/7)     IGHD1-1*01   5    -----.......------------------------------------------------------  11
J  98.0% (48/49)    IGHJ2*01     5    -----------------....................................A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_224491

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHD1-26*01                                                                                           18.0    0.56  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	AGCA	AGTGGGAGC	CTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAAGCAAGTGGGAGCCTTATGACTCC	ARSKWEPYDS	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5302   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGTACCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.4% (239/248)  IGHV3-74*01  47   ....................................C........G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  K  S  D  G  S  S  G  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5302   91   TGTGGGTCTCACGTATTAAAAGTGATGGGAGTAGCGGAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (239/248)  IGHV3-74*01  137  ...................T...............AC..G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  H  M  N  N  L  R  A  E  D  T  A  L  Y  Y  C  A  R  S  K  W  E  P  Y  D  
                    Query_5302   181  AGAACACGCTGTATCTGCACATGAACAATCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCAAGAAGCAAGTGGGAGCCTTATGACT  270
V  96.4% (239/248)  IGHV3-74*01  227  ...................A.......G......................G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD1-26*01  6    ------------------------------------------------------------------------.........---------  14
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5302   271  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_291405

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           417     6e-119
IGHD3-3*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCAACCTGACTC	TTTTGGAGTGGTTAT	CTC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGGCAACCTGACTCTTTTGGAGTGGTTATCTCCTTTGACAAC	TRGQPDSFGVVISFDN	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	72	3	0	96
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	112	2	0	98.2
CDR3-IMGT (germline)	290	296	7	6	1	0	85.7
Total	N/A	N/A	295	281	14	0	95.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  N  F  S 
                    Query_5303   2    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTAAGGCTTCTGGTTACAACTTTAGC  91
V  95.3% (281/295)  IGHV1-18*01  1    ...G.T...........................................................C................C.....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       G  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  T  G  Y  N  G  K  R  N  Y 
                    Query_5303   92   GGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCACCGGTTACAATGGTAAAAGAAACTAT  181
V  95.3% (281/295)  IGHV1-18*01  91   A.......................................................A.......G..C............C.C.......  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  L  Q  D  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_5303   182  GCACAGAATCTCCAGGACAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  271
V  95.3% (281/295)  IGHV1-18*01  181  ........G.......G.........................................................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  T  R  G  Q  P  D  S  F  G  V  V  I  S  F  D  N  W  G  Q  G  T  L  V  T 
                    Query_5303   272  ACGGCCGTGTATTACTGTACGAGAGGGCAACCTGACTCTTTTGGAGTGGTTATCTCCTTTGACAACTGGGGCCAGGGAACCCTGGTCACC  361
V  95.3% (281/295)  IGHV1-18*01  271  ..................G......-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (15/15)   IGHD3-3*01   11   --------------------------------------...............-------------------------------------  25
J  97.7% (43/44)    IGHJ4*02     5    --------------------------------------------------------.......T..........................  38

                                                
                                       V  S  S  
                    Query_5303   362  GTCTCCTCAG  371
J  97.7% (43/44)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_224493

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	ATTTAGAATATCAGTTTTCACTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATTTAGAATATCAGTTTTCACTTACTACTTTGACTAC	AREFRISVFTYYFDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  I  K  N  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5304   1    ACCCTGTCCCTCACCTGCAGCGTCTCTGGTGCCTCCATCAAAAATTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...................CT..........G........GT.G..A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  E  D  T  S  K  N 
                    Query_5304   91   TGGATTGGGTATATCTACTACAGTGGGAGCACCAACTATAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGAAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  .................T....................C..................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  E  F  R  I  S  V  F  T  Y 
                    Query_5304   181  CAGTTCTCCCTGAAACTGACTTCTGTGACCGCTGCGGACACGGCCATTTATTATTGTGCGAGAGAATTTAGAATATCAGTTTTCACTTAC  270
V  93.5% (229/245)  IGHV4-59*01  229  ..............G....GC........................G.G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  97.9% (47/48)    IGHJ4*02     1    ----------------------------------------------------------------------------------------..  2

                                      ----------->                                  
                                       Y  F  D  Y  W  S  Q  G  T  L  V  T  V  S  S  
                    Query_5304   271  TACTTTGACTACTGGAGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.9% (47/48)    IGHJ4*02     3    ...............G..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_49551

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTTTATTACCT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTATTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  E  G  S  G  Y  S  F  S  T  Y
                    Query_5305   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTGAGGGTTCTGGATACAGTTTTTCCACTTA  90
V  94.8% (276/291)  IGHV5-51*01  6    .............................................................A................C...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  P
                    Query_5305   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAGTCC  180
V  94.8% (276/291)  IGHV5-51*01  96   C.......G.................................................T.................A..........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_5305   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  .......C.....................C...............C...........................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_5305   271  CATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTATTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  94.8% (276/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD1-26*01  4    -----------------------------...G....A.....-----------------------------------------------  17
J  98.0% (48/49)    IGHJ6*02     14   ------------------------------------------------------....................................  49

                                                   
                                        T  V  S  S 
                    Query_5305   361  CACCGTCTCGTCA  373
J  98.0% (48/49)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_291408

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           419     2e-119
IGHD1-26*01                                                                                           10.3    141   
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GTGAGGATGTCTTTGATGCGG	GTGGG	TCCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGAGGATGTCTTTGATGCGGGTGGGTCCCACTACTACGGCTGGGACGTC	ARREDVFDAGGSHYYGWDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  N  F  A  A  F
                    Query_5306   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAACTTTGCCGCCTT  90
V  96.2% (279/290)  IGHV5-51*01  6    .............................................................................G....A..AG..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_5306   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCCGGGGACTCTGATACCAGATACAGCCC  180
V  96.2% (279/290)  IGHV5-51*01  96   ...............................................................T..T.......................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  A  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  R  R  A  S  D  T  A
                    Query_5306   181  GTCCTTCCAAGGCCAGGTCGCCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCGGAGGGCCTCGGACACCGC  270
V  96.2% (279/290)  IGHV5-51*01  186  ...................A....C..............................................T..A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  R  E  D  V  F  D  A  G  G  S  H  Y  Y  G  W  D  V  W  G  Q  G  T  T  V
                    Query_5306   271  CATGTATTACTGTGCGAGACGTGAGGATGTCTTTGATGCGGGTGGGTCCCACTACTACGGCTGGGACGTCTGGGGCCAAGGGACCACGGT  360
V  96.2% (279/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD1-26*01  7    -----------------------------------------.....--------------------------------------------  11
J  92.5% (49/53)    IGHJ6*02     10   --------------------------------------------------..........TAT...........................  49

                                                   
                                        T  V  S  S 
                    Query_5306   361  CACCGTCTCTTCA  373
J  92.5% (49/53)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_224498

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           355     3e-100
IGHD1-26*01                                                                                           18.0    0.59  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTCCGGAG	GTGGGAACTACT	CGTGGTCCTTTTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCGGAGGTGGGAACTACTCGTGGTCCTTTTCCTAC	ARGSGGGNYSWSFSY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5307   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGCTTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-21*01  47   .............................................G.......A...A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  S  S  S  S  Y  M  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5307   91   AGTGGGTCTCATCCATTACTAGTAGTAGTAGTTACATGAACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (238/249)  IGHV3-21*01  137  ..................G..................AT...................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  S  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  G  S  G  G  G  N  Y  
                    Query_5307   181  AGAGCTCCCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTTCTGTGCGAGAGGGTCCGGAGGTGGGAACTACT  270
V  95.6% (238/249)  IGHV3-21*01  227  ...A...A....A.......................................G....A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD1-26*01  7    ------------------------------------------------------------------------------......G.....  18

                                      ---------------->                                  
                                      S  W  S  F  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5307   271  CGTGGTCCTTTTCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (38/38)   IGHJ4*02     11   -------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_224499

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            414     5e-118
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CACA	TACTATCCTTCGGGGAGTT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATACTATCCTTCGGGGAGTTTACTACGGTATGGACGTC	ARAHTILRGVYYGMDV	273	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	30	0	0	100
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	24	3	0	88.9
FR3-IMGT	159	272	114	112	2	0	98.2
CDR3-IMGT (germline)	273	279	7	6	1	0	85.7
Total	N/A	N/A	279	272	7	0	97.5


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  M  S  G  D  S  V  S  S  N  S  A  A  W  N  W  
                    Query_5308   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATGTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGA  90
V  97.5% (272/279)  IGHV6-1*01   26   ..............................................C...........................................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  R  W  Y  T  D  Y  A  V  S  V  K  
                    Query_5308   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCGAGGTGGTATACTGATTATGCAGTCTCTGTGAAAA  180
V  97.5% (272/279)  IGHV6-1*01   116  .......................................................C.A........A............A..........  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_5308   181  GTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTCTATTACT  270
V  97.5% (272/279)  IGHV6-1*01   206  ..................................................................................G.......  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-------------------CDR3-IMGT------------------>                                 
                                      C  A  R  A  H  T  I  L  R  G  V  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  P  V  S  S 
                    Query_5308   271  GTGCGAGAGCACATACTATCCTTCGGGGAGTTTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCCCCGTCTCCTCA  353
V  97.5% (272/279)  IGHV6-1*01   296  ....A....--------------------------------------------------------------------------  304
                                      C  A  R                                                                            
D  89.5% (17/19)    IGHD3-10*01  5    -------------......GG...........---------------------------------------------------  23
J  98.0% (50/51)    IGHJ6*02     12   --------------------------------.......................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_49555

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           361     4e-102
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5309   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTTAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-33*01  47   ........................................C...AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  A  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5309   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGCGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  96.4% (240/249)  IGHV3-33*01  137  ......................................................T...............................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_5309   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  96.4% (240/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_5309   271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_49554

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           310     1e-86
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGCCGAAATC	GTATTACGACTTTTGGA	ATCCTTATTCTCGGCTCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCGAAATCGTATTACGACTTTTGGAATCCTTATTCTCGGCTCCTTCGACCCC	ARGGRNRITTFGILILGSFDP	240	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  D  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_5310   4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGGTCCTTCAGTGATCATTATTGGAGCTGGATCCGCCAGTCTCCAGGGAAGGGGCTGGAAT  93
V  90.6% (221/244)  IGHV4-34*01  50   .....TCC...A..............................G.T.C..C..................C.C.................G.  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N  
                    Query_5310   94   GGATTGGGGAGATCAACCATAGTGGAAGCACCAACTACAACCCGTCTCTCAAGAGTCGAGTCACCATATCAGCGGACACGTCTAAGAACC  183
V  90.6% (221/244)  IGHV4-34*01  140  ..........A.....T.............................C.........................TA........C.......  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------------CDR3-IM
                                      R  F  S  L  K  L  I  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  G  R  N  R  I  T  T  F  
                    Query_5310   184  GGTTCTCCCTGAAGTTGATCTCTGTGACCGCCGCAGACACGGCTGTATATTTCTGTGCGAGAGGGGGCCGAAATCGTATTACGACTTTTG  273
V  90.6% (221/244)  IGHV4-34*01  230  A.............C...G...............G...........G....A............--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  94.1% (16/17)    IGHD3-3*01   1    ---------------------------------------------------------------------------.........T.....  15

                                      GT-------------------------->                                  
                                      G  I  L  I  L  G  S  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_5310   274  GAATCCTTATTCTCGGCTCCTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  336
D  94.1% (16/17)    IGHD3-3*01   16   ..-------------------------------------------------------------  17
J  97.7% (42/43)    IGHJ5*02     9    --------------------.........................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_329582

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            329     3e-92
IGHD2-21*01                                                                                           14.1    8.8  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTTGTCCCCGACACCCTAT	TATTGTG	ACAGTGGCGATGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATTTGTCCCCGACACCCTATTATTGTGACAGTGGCGATGGCTTTGGCTAC	AKDLSPTPYYCDSGDGFGY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  S  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5311   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTTAGTGATTCTTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-7*03   47   ....................................CC......AGC.A.........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  N  I  K  Y  D  G  G  E  K  F  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  T  
                    Query_5311   91   AGTGGCTGGCCAACATAAAGTATGATGGAGGTGAGAAATTCTATGCGGACTCTGTGAAGGGCCGATTCAGCATCTCCAGAGACAACACCA  180
V  92.0% (230/250)  IGHV3-7*03   137  .....G..............C.A......A.........A.....T.......................C................G...  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  D  L  S  P  T  P  Y  
                    Query_5311   181  AGAATTCATTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTATATTACTGTGCGAAAGATTTGTCCCCGACACCCTATT  270
V  92.0% (230/250)  IGHV3-7*03   227  ....C...C...........................C...............G.............G...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-21*01  5    -----------------------------------------------------------------------------------------.  5

                                      -IMGT----------------------->                                  
                                      Y  C  D  S  G  D  G  F  G  Y  W  G  Q  G  T  L  V  S  V  S  T  
                    Query_5311   271  ATTGTGACAGTGGCGATGGCTTTGGCTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCACAG  333
D  100.0% (7/7)     IGHD2-21*01  6    ......---------------------------------------------------------  11
J  93.2% (41/44)    IGHJ4*02     5    -------------------.....A.........................A........T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_98380

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         380     1e-107
IGHD6-19*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCTTAAGGTCAATCGCGTC	CAGTGGCTGG	GCGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCA	ARHPLRSIASSGWAS	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	78	72	65	7	0	90.3
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	101	13	0	88.6
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  T  F  T  N 
                    Query_5312     7    GTCCAGCTTGTGCAGTCTGGAGGAGAGGTGAAGAAGCCCGGGGAGTCTTTGAGGATTTCCTGTAAGGCTTCTGGATACACCTTTACCAAC  96
V  91.8% (267/291)  IGHV5-10-1*01  4    ..G.....G.............C.........A...............C.......C..........G...........G........G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  W  I  S  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  R  Y  S 
                    Query_5312     97   TACTGGATCAGCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGACCCTAGTGACTCTTATACCCGCTACAGT  186
V  91.8% (267/291)  IGHV5-10-1*01  94   ........................A.....................................T..................AA......C  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  D  G  N  V  A  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  M  A  S  D  T 
                    Query_5312     187  CCGTCCTTCGACGGCAACGTCGCCATCTCAGTTGACAAGTCCATCAGTACTGCCTATTTGCAGTGGAGCAGCCTGATGGCCTCGGACACC  276
V  91.8% (267/291)  IGHV5-10-1*01  184  .........C.A...C.....A.........C...............C........CC..................A.............  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><-----------------CDR3-IMGT----------------->                              
                                         A  M  Y  Y  C  A  R  H  P  L  R  S  I  A  S  S  G  W  A  S  W  G  Q  G  T  L  V  T  V  S 
                    Query_5312     277  GCCATGTATTATTGTGCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCATGGGGCCAGGGAACCCTGGTCACCGTCTCC  366
V  91.8% (267/291)  IGHV5-10-1*01  274  ...........C.........---------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                      
D  100.0% (10/10)   IGHD6-19*01    9    --------------------------------------------..........------------------------------------  18
J  100.0% (34/34)   IGHJ4*02       15   ------------------------------------------------------------..............................  44

                                            
                                         S  
                    Query_5312     367  TCAG  370
J  100.0% (34/34)   IGHJ4*02       45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_92985

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           260     1e-71
IGHD2-21*01                                                                                           19.9    0.17 
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATTGGCA	GTGGTGGTGGTTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATTGGCAGTGGTGGTGGTTGCTACTTTGACAAC	ARRLGSGVPCTPFRIGSGGGCYFDN	246	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	18	8	0	69.2
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	99	15	0	86.8
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	207	41	0	83.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  P  G  D  S  I  S  S  D  S  F  Y  W  A  W  I  R  Q  S  P  V  K  G  
                    Query_5313   4    CCCTGAGACTCTCCTGTACTGTTCCCGGTGATTCCATCAGCAGTGACAGTTTCTACTGGGCCTGGATCCGCCAGTCCCCAGTGAAGGGAC  93
V  83.5% (207/248)  IGHV4-39*02  50   .....TCC...A....C.....CT.T....GC............AGT....A........G.............C......G......G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  T  M  F  N  G  G  R  T  Y  S  N  P  S  L  K  N  R  V  T  I  S  A  D  T  S  
                    Query_5313   94   TGGAGTGGATAGGGACTATGTTTAATGGTGGACGCACCTATTCCAACCCGTCCCTCAAGAATCGAGTCACCATATCTGCGGACACGTCCA  183
V  83.5% (207/248)  IGHV4-39*02  140  ..........T....G...C.A.T..A....GA.......C.A.................G...............C.TA..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      R  N  H  F  S  L  R  L  T  Y  V  T  S  A  D  S  G  V  Y  Y  C  A  R  R  L  G  S  G  V  P  
                    Query_5313   184  GGAACCACTTCTCCCTGAGGCTGACCTATGTGACCTCCGCAGACAGCGGTGTCTATTACTGTGCGAGACGTCTTGGGTCCGGTGTCCCCT  273
V  83.5% (207/248)  IGHV4-39*02  230  A.................A.....G..C.......G.........CG.C...G...............----------------------  297
                                      K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       

                                      -----CDR3-IMGT-------------------------------->                                 
                                      C  T  P  F  R  I  G  S  G  G  G  C  Y  F  D  N  W  G  Q  G  T  L  F  P  F  S  S 
                    Query_5313   274  GTACTCCCTTCCGCATTGGCAGTGGTGGTGGTTGCTACTTTGACAACTGGGGCCAGGGAACCCTGTTCCCCTTCTCCTCA  353
D  92.3% (12/13)    IGHD2-21*01  9    ---------------------.........A...----------------------------------------------  21
J  91.3% (42/46)    IGHJ4*02     2    ----------------------------------..........T....................G..A..G........  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_92986

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ2*01                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTACTATAATCCTAGTGGTTTTTAC	GGGTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACTATAATCCTAGTGGTTTTTACGGGTTCTGGTACTTCGATCTC	ARDYYNPSGFYGFWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  N  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5314   1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAATAATTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ...........................G............G..G...C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  D  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5314   91   TGGATTGGGGACATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  .........T.T..............................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  F  Y 
                    Query_5314   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATTACTATAATCCTAGTGGTTTTTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.0% (21/25)    IGHD3-22*01  4    -----------------------------------------------------------------.......G..AG........A....  28

                                      -------------------->                                  
                                       G  F  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_5314   271  GGGTTCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  325
J  100.0% (50/50)   IGHJ2*01     4    -----..................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_140136

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           346     2e-97
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCCAA	GTATAGGAGTGGC	ACCTACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCCAAGTATAGGAGTGGCACCTACTTTTGACTAT	AREPSIGVAPTFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  T  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  R  R 
                    Query_5315   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTACTGGTGGCTACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAGGAGA  90
V  94.0% (236/251)  IGHV4-61*08  49   .........................................C.G......T...........C.................A....A.G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 
                    Query_5315   91   CTGGAGTGGATTGGCTATATCTATTACACTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACAAGTCG  180
V  94.0% (236/251)  IGHV4-61*08  139  ..............G.............G......C............................................A....C...C  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  P  S  I  G  V  A 
                    Query_5315   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGAGCCAAGTATAGGAGTGGCA  270
V  94.0% (236/251)  IGHV4-61*08  229  ...................A.......................................C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD6-19*01  3    ----------------------------------------------------------------------------......C......-  15

                                      -------------->                                  
                                       P  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5315   271  CCTACTTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  97.7% (42/43)    IGHJ4*02     6    ------........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_314403

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            386     1e-109
IGHD6-6*01                                                                                            18.0    0.65  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCGTCTCGAC	TATAGGAGCTCG	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCGTCTCGACTATAGGAGCTCGCTTTGACTAC	ARSVSTIGARFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_5316  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  92.7% (268/289)  IGHV1-2*04  6    ..................G.......................................................................  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       F  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  W  I  N  P  N  T  G  D  T  K  Y  A  Q
                    Query_5316  91   CTTTATTCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCATGGATCAACCCTAACACTGGTGACACAAAGTATGCACA  180
V  92.7% (268/289)  IGHV1-2*04  96   ..A...G...........................................G.................G.....G......C........  185
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  D  W  V  I  T  T  K  D  T  S  I  T  T  A  Y  M  E  I  T  R  L  T  S  D  D  T  A
                    Query_5316  181  GAAGTTTAAGGATTGGGTCATCACGACTAAGGACACGTCCATCACCACAGCCTACATGGAGATCACCAGACTGACATCTGACGACACGGC  270
V  92.7% (268/289)  IGHV1-2*04  186  .......C...GC.......C..T...C.G..............G................C.G.G...G....G...............  275
                                       K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                     ------------><--------------CDR3-IMGT-------------->                                
                                       V  Y  F  C  A  R  S  V  S  T  I  G  A  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5316  271  CGTGTATTTCTGTGCGAGATCCGTCTCGACTATAGGAGCTCGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  354
V  92.7% (268/289)  IGHV1-2*04  276  ........A..........-----------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                  
D  91.7% (11/12)    IGHD6-6*01  4    ------------------------------.....C......------------------------------------------  15
J  100.0% (42/42)   IGHJ4*02    5    ------------------------------------------..........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_314402

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           349     2e-98
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGGAGAAG	ACGATTTTTGGAGTGG	N/A	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGGAGAAGACGATTTTTGGAGTGGTTACTTCTACCTCCACGGGATGCACGTC	ARVGEDDFWSGYFYLHGMHV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  A  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5317   1    GGTCCCTGAGACTCTCCTGTTCAGCGTCTGGATTCACCTTCGCTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-33*01  47   ....................G....................AG...C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  T  T  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5317   91   AGTGGGTGGCAGTTATTTGGTATGATGGAACTACTAAGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCC  180
V  94.8% (236/249)  IGHV3-33*01  137  ................A.............G..A...A...................................................A  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      Q  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  E  D  D  F  W  
                    Query_5317   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGCGAGCCGAAGACACGGCTGTCTATTACTGTGCGAGAGTCGGAGAAGACGATTTTTGGA  270
V  94.8% (236/249)  IGHV3-33*01  227  ........C.......................A.......G...........G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (16/16)   IGHD3-3*01   6    ------------------------------------------------------------------------------............  17

                                      R3-IMGT------------------------>                                 
                                      S  G  Y  F  Y  L  H  G  M  H  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5317   271  GTGGTTACTTCTACCTCCACGGGATGCACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  100.0% (16/16)   IGHD3-3*01   18   ....-------------------------------------------------------------  21
J  90.2% (55/61)    IGHJ6*02     2    ----.....A....TA.T....T...G......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_314400

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           347     7e-98
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATAG	GGGTG	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATAGGGGTGACTATTTTGACTAC	ARGLHYYDRGDYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5318   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTCACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.4% (236/250)  IGHV4-31*03  49   ..................................C......C.........T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_5318   91   CTGGAGTGGATTGGGTTCATTTATTACAGTGGGACCACCTACTACAATAAGTCCCTCAAGAGTCGAGTCACCATATCGGTAGACACGTCT  180
V  94.4% (236/250)  IGHV4-31*03  139  ................A...C.............G............CCC..................T........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R 
                    Query_5318   181  AAGAACCAGTTCTCCCTGAATCTGCGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCTCCATTACTATGATAGG  270
V  94.4% (236/250)  IGHV4-31*03  229  ....................G...A.............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD3-22*01  3    ----------------------------------------------------------------------------.............-  15

                                      ----------------->                                  
                                       G  D  Y  F  D  Y  W  G  Q  G  I  L  V  P  V  S  S  
                    Query_5318   271  GGTGACTATTTTGACTACTGGGGCCAGGGAATCCTGGTCCCCGTCTCCTCAG  322
J  93.8% (45/48)    IGHJ4*02     1    ----....C......................C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_314406

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           315     5e-88
IGHD5-18*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD5-18*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGGCCTTCCCG	GGATACAGCTCTGGT	CTAGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGGCCTTCCCGGGATACAGCTCTGGTCTAGGTGCTTTTGATATC	AKGAFPGYSSGLGAFDI	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	125	24	22	2	0	91.7
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	231	216	15	0	93.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  N  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  F  I  
                    Query_5319   16   GTGCAGCCTCTGGATTCACCTTCAGCAACTATGCCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCATTTATAT  105
V  93.5% (216/231)  IGHV3-30*18  65   .........................T.G.....G...G.............................................G......  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  F  D  G  S  D  K  Y  F  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  K  N  T  V  F  L  
                    Query_5319   106  CATTTGATGGAAGTGATAAATACTTTGCGGACTCCGTGAAGGGCAGATTCAGCATCTCCAGAGACAATTCCAAGAATACGGTGTTTCTGC  195
V  93.5% (216/231)  IGHV3-30*18  155  ...A..........A.........A...A...............C......C........................C...C...A.....  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------------CDR3-IMGT----------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  A  F  P  G  Y  S  S  G  L  G  A  F  
                    Query_5319   196  AAATGAACAGCCTGAGAGCTGAGGACACGGCTGTTTATTACTGTGCGAAAGGGGCCTTCCCGGGATACAGCTCTGGTCTAGGTGCTTTTG  285
V  93.5% (216/231)  IGHV3-30*18  245  ..................................G................---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  93.3% (14/15)    IGHD5-18*01  3    --------------------------------------------------------------..........A....-------------  17
J  100.0% (47/47)   IGHJ3*02     4    ----------------------------------------------------------------------------------........  11

                                      ---->                                  
                                      D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5319   286  ATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
J  100.0% (47/47)   IGHJ3*02     12   .......................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_314405

Length=417
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           350     1e-98
IGHD2-15*01                                                                                           12.2    39   
IGHJ6*02                                                                                              85.3    9e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGCAA	TGTAGT	CCTCACTAATAGGCGCGGACTTACGGGGCCAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCGCAATGTAGTCCTCACTAATAGGCGCGGACTTACGGGGCCAGACTACCACTACTACGGCATGGACGTC	ARERNVVLTNRRGLTGPDYHYYGMDV	284	361	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	64	5	0	92.8
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	257	33	0	88.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  T  A  A  G  Y  T  F  S  S  Y 
                    Query_5320   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCGTGCACGGCCGCTGGGTACACCTTTAGTAGTTAT  91
V  88.6% (257/290)  IGHV1-18*01  7    .................................................A......C....A...TT....T..........CC..C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  K  N  G  D  T  K  Y  E  Q 
                    Query_5320   92   AGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCCAAGAACGGAGACACCAAATATGAGCAG  181
V  88.6% (257/290)  IGHV1-18*01  97   G.......C.....................................................TT.C..T..TA....A..C....CA...  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  D  R  I  F  L  T  T  E  T  S  T  S  T  A  Y  M  E  V  T  S  L  R  P  D  D  T  A 
                    Query_5320   182  AAGTTCCAGGACAGAATCTTCCTGACCACAGAGACATCCACGAGTACAGCCTACATGGAGGTGACGAGCCTGAGACCTGACGACACGGCC  271
V  88.6% (257/290)  IGHV1-18*01  187  ...C......G....G..AC.A..........C...........C...............C...G..........T..............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------------------CDR3-IMGT--------------------------------->
                                       V  Y  Y  C  A  R  E  R  N  V  V  L  T  N  R  R  G  L  T  G  P  D  Y  H  Y  Y  G  M  D  V 
                    Query_5320   272  GTCTATTACTGTGCGAGAGAGCGCAATGTAGTCCTCACTAATAGGCGCGGACTTACGGGGCCAGACTACCACTACTACGGCATGGACGTC  361
V  88.6% (257/290)  IGHV1-18*01  277  ..G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD2-15*01  8    --------------------------......----------------------------------------------------------  13
J  91.5% (54/59)    IGHJ6*02     4    ----------------------------------------------------------------.....T..........T.........  29

                                                                       
                                       W  G  Q  G  S  S  V  T  V  S  S 
                    Query_5320   362  TGGGGCCAAGGGTCCTCTGTCACCGTCTCCTCA  394
J  91.5% (54/59)    IGHJ6*02     30   ............A..A.G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40919688


Query= Query_314404

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           427     1e-121
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGGACAC	TGTAGTAGTGCCATCTGCGATG	GACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTAC	ARHMGHCSSAICDGPDY	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	70	4	0	94.6
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	111	3	0	97.4
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	284	11	0	96.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  Q  K  P  G  E  A  L  K  I  S  C  K  G  S  G  Y  S  F  G  
                    Query_5321   2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGCAAAAGCCGGGGGAGGCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCA  91
V  96.3% (284/295)  IGHV5-51*01  2    ..G.............................A.......C......T......................................AC..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_5321   92   GTTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  181
V  96.3% (284/295)  IGHV5-51*01  92   .C..........G.............................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  
                    Query_5321   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACA  271
V  96.3% (284/295)  IGHV5-51*01  182  .................................C.........C.................................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  M  Y  Y  C  A  R  H  M  G  H  C  S  S  A  I  C  D  G  P  D  Y  W  G  Q  G  T  L  V  
                    Query_5321   272  CCGCCATGTATTACTGTGCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTACTGGGGCCAGGGAACCCTGGTCA  361
V  96.3% (284/295)  IGHV5-51*01  272  .........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  86.4% (19/22)    IGHD2-2*01   8    -----------------------------------.........A...G....T...---------------------------------  29
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------.............................  36

                                                  
                                      T  V  S  S  
                    Query_5321   362  CCGTCTCCTCAG  373
J  100.0% (41/41)   IGHJ4*02     37   ............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_48136

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            350     9e-99
IGHD2-2*01                                                                                            14.1    9.9  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGAGCCCCAA	TAGTCCCAGC	GCTGATATACAGACC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGAGCCCCAATAGTCCCAGCGCTGATATACAGACCCAACTGGTTCGCCCCC	ARERAPIVPALIYRPNWFAP	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	15	9	0	62.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	257	33	0	88.6


Alignments

                                     <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                      Q  L  V  Q  S  G  A  E  V  K  K  S  G  A  S  V  K  V  S  C  K  A  S  G  Y  R  F  D  S  H 
                    Query_5322  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGTCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGCTACAGGTTCGATAGTCAT  91
V  88.6% (257/290)  IGHV1-3*01  7    .....T...........G...............C.....................................A....CC...AC...CT..  96
                                      Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                     --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                      G  I  H  W  L  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  V  A  D  G  Y  T  R  Y  S  Q 
                    Query_5322  92   GGCATCCATTGGCTGCGCCAGGCCCCCGGACAAGGGCTTGAGTGGATGGGCTGGATCAACGTTGCCGATGGTTACACGAGATATTCACAG  181
V  88.6% (257/290)  IGHV1-3*01  97   .CT..G......G....................A................A..........C..G.A.....A....A.A..........  186
                                      A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                     -----------------------------------------FR3-IMGT-----------------------------------------
                                      R  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  F  V  E  L  R  S  L  R  S  G  D  T  A 
                    Query_5322  182  AGGTTCCAAGGGAGAGTCACCATTACCAGAGACACATCCGCGAGCACAGCTTTCGTGGAACTGAGGAGCCTGAGATCTGGAGACACGGCT  271
V  88.6% (257/290)  IGHV1-3*01  187  .A......G..C.................G....................C.A.A....G.....C.............A..........  276
                                      K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                     -----------><-------------------------CDR3-IMGT------------------------>                  
                                      V  Y  Y  C  A  R  E  R  A  P  I  V  P  A  L  I  Y  R  P  N  W  F  A  P  W  G  Q  G  T  L 
                    Query_5322  272  GTCTATTACTGTGCGAGAGAAAGAGCCCCAATAGTCCCAGCGCTGATATACAGACCCAACTGGTTCGCCCCCTGGGGCCAGGGAACCCTG  361
V  88.6% (257/290)  IGHV1-3*01  277  ..G.................----------------------------------------------------------------------  296
                                      V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD2-2*01  13   -------------------------------....A.....-------------------------------------------------  22
J  97.9% (47/48)    IGHJ5*02    2    --------------------------------------------------------...........A......................  35

                                                   
                                      V  T  V  S  S
                    Query_5322  362  GTCACCGTCTCCTC  375
J  97.9% (47/48)    IGHJ5*02    36   ..............  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_314409

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           336     1e-94
IGHD3-10*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCCGCCGC	TTCGGGGAGTT	GACGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCCGCCGCTTCGGGGAGTTGACGCTTGACTAC	ARDGRRFGELTLDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  S  V  S  T  N  Y  M  S  W  F  R  Q  A  P  G  K  G  L  
                    Query_5323   1    GGTCCCTGAGACTCTCCTGTGCAGTTTCTGGGTTCAGCGTCAGTACCAATTACATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-53*01  47   ........................CC..........C........G...C............G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  L  Y  S  G  G  V  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_5323   91   AGTGGGTCTCAGTTCTTTATAGTGGTGGTGTCACATTCTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.5% (231/247)  IGHV3-53*01  137  ..............A.......C......AG.....A.....................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  I  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  R  R  F  G  E  L  
                    Query_5323   181  ACACATTGTATCTTCAAATGAATATCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGAGATGGCCGCCGCTTCGGGGAGTTGA  270
V  93.5% (231/247)  IGHV3-53*01  227  ....GC................C.G..............................C...........-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD3-10*01  13   -----------------------------------------------------------------------------...........--  23

                                      ---------->                                  
                                      T  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5323   271  CGCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (42/42)   IGHJ4*02     7    ---..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_238630

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           416     2e-118
IGHD1-26*01                                                                                           10.3    136   
IGHJ5*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	GGAGC	ACATCAATGCCTCGGACGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGATCGGAGCACATCAATGCCTCGGACGGACTGGTGCGATACC	GRDRSTSMPRTDWCDT	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  R  K  A  S  G  Y  T  F  T  S  Y 
                    Query_5324   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCCGCAAGGCTTCTGGTTACACGTTTACCAGTTAT  91
V  95.9% (278/290)  IGHV1-18*01  7    .........................................................T...................C........C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  T  Y  N  G  D  T  N  Y  A  Q 
                    Query_5324   92   GGTATCAGCTGGGTGCGCCAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCACTTACAATGGTGACACAAACTATGCACAG  181
V  95.9% (278/290)  IGHV1-18*01  97   .................A................................A.........G...........A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  E  V  R  S  L  R  S  D  D  T  A 
                    Query_5324   182  AAGTTCCAGGGCAGAGTCACCCTGACCACAGACACATCCACGAGCACAGCCTACATGGAGGTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.9% (278/290)  IGHV1-18*01  187  ...C.................A......................................C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  G  R  D  R  S  T  S  M  P  R  T  D  W  C  D  T  W  G  E  G  T  L  V  T  V  S 
                    Query_5324   272  GTGTATTATTGTGGGAGAGATCGGAGCACATCAATGCCTCGGACGGACTGGTGCGATACCTGGGGCGAGGGAACCCTGGTCACCGTCTCC  361
V  95.9% (278/290)  IGHV1-18*01  277  ........C....C......----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (5/5)     IGHD1-26*01  10   ----------------------.....---------------------------------------------------------------  14
J  91.5% (43/47)    IGHJ5*02     4    ----------------------------------------------......T...CC........C.......................  47

                                         
                                       S 
                    Query_5324   362  TCA  364
J  91.5% (43/47)    IGHJ5*02     48   ...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_249914

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           417     6e-119
IGHD4-17*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGGA	CCCGAGC	CGGTGACTAC	GAGAGACAAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGACCCGAGCCGGTGACTACGAGAGACAAATTGACTCC	ARTRAGDYERQIDS	263	304	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	30	0	0	100
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	113	1	0	99.1
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	269	268	1	0	99.6


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R
                    Query_5325   1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAATGTGTGTGAGCTGGATCCG  90
V  99.6% (268/269)  IGHV2-70*01  30   ..........................................................................................  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T
                    Query_5325   91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACTCATTGATTGGGATGATGATAAATACTACAGCACATCTCTGAAGACCAGGCTCAC  180
V  99.6% (268/269)  IGHV2-70*01  120  ..........................................................................................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  G  T  Y  Y  C  A  R  T
                    Query_5325   181  CATCTCCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGGCACGTATTACTGTGCACGGAC  270
V  99.6% (268/269)  IGHV2-70*01  210  ....................................................................C....................-  298
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                      ---------CDR3-IMGT--------------->                                  
                                        R  A  G  D  Y  E  R  Q  I  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5325   271  CCGAGCCGGTGACTACGAGAGACAAATTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  338
D  100.0% (10/10)   IGHD4-17*01  7    ------..........----------------------------------------------------  16
J  97.6% (41/42)    IGHJ4*02     7    --------------------------......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_249915

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           403     1e-114
IGHD3-3*01                                                                                            14.1    9.0   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	261	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	23	1	0	95.8
FR2-IMGT	75	125	51	51	0	0	100
CDR2-IMGT	126	146	21	21	0	0	100
FR3-IMGT	147	260	114	112	2	0	98.2
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	263	5	0	98.1


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  
                    Query_5326   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCC  90
V  98.1% (263/268)  IGHV4-34*01  26   ........T.......T.......................................................A.................  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_5326   91   AGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCA  180
V  98.1% (263/268)  IGHV4-34*01  116  ..........................................................................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  A  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_5326   181  TATCAGCAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCG  270
V  98.1% (263/268)  IGHV4-34*01  206  ......T...............................................................G.................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  

                                      ----------CDR3-IMGT------------------>                                  
                                      A  G  G  L  F  I  F  V  A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5326   271  CAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
D  100.0% (7/7)     IGHD3-3*01   9    --------------.......---------------------------------------------------  15
J  100.0% (43/43)   IGHJ4*02     6    -----------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_249916

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            300     8e-84
IGHD6-19*01                                                                                           14.1    8.4  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATCGAACAT	CAGTGGGTGG	AATACACGCTT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATCGAACATCAGTGGGTGGAATACACGCTTTGGACGTC	ARYRTSVGGIHALDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	25	2	0	92.6
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	17	4	0	81
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	220	28	0	88.7


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  A  S  I  S  S  T  N  W  W  T  W  V  R  Q  P  P  G  K  G  
                    Query_5327   1    GGTCCCTGAGACTCTCCTGCGCTGTGTCTGGTGCCTCCATCAGCAGTACTAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  88.7% (220/248)  IGHV4-4*02   47   ..A.....TCC...A..........C.......G..............G...........G.............................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  S  G  N  A  N  L  N  P  S  L  R  S  R  F  S  I  S  V  D  K  S  
                    Query_5327   91   TGGAGTGGATTGGAGAAATATATCATAGTGGGAATGCCAACCTCAACCCGTCACTCAGGAGTCGTTTTAGCATCTCAGTAGACAAGTCCA  180
V  88.7% (220/248)  IGHV4-4*02   137  .............G.....C.............GCA.....TA.........C....A......AG.C.C...A................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  G  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  R  T  S  V  G  G  
                    Query_5327   181  AGAACCAATTCTCCCTGAAGCTGGGTTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGCGAGATATCGAACATCAGTGGGTGGAA  270
V  88.7% (220/248)  IGHV4-4*02   227  .......G...............A.C..........................G.....C.........----------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD6-19*01  9    ------------------------------------------------------------------------------......C...--  18

                                      ---------------->                                 
                                      I  H  A  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5327   271  TACACGCTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  100.0% (41/41)   IGHJ6*02     22   ---------.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_249917

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           297     7e-83
IGHD2-21*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TACCCCAAGACA	TGGTGAT	CCCTGGGG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATACCCCAAGACATGGTGATCCCTGGGGTGACTTC	ARDTPRHGDPWGDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  V  S  G  F  T  F  S  N  Y  E  M  N  W  I  R  Q  V  P  G  K  G  L  
                    Query_5328   1    GGTCCCTGAGACTCTCCTGTGTAGTCTCTGGATTCACCTTCAGTAATTATGAGATGAACTGGATCCGCCAAGTTCCAGGGAAGGGCCTGG  90
V  88.0% (220/250)  IGHV3-48*03  47   .....................C..C....................G......A.........G.......G.C............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  T  D  G  G  N  A  I  Y  A  D  S  V  R  G  R  F  T  M  S  R  D  N  A  
                    Query_5328   91   AGTGGCTCTCATACATCAGTACTGATGGTGGCAATGCAATTTATGCAGACTCTGTGAGGGGCCGATTCACCATGTCCAGAGACAACGCCA  180
V  88.0% (220/250)  IGHV3-48*03  137  .....G.T........T....G.AG....A.T.CCAT.TAC..C.............A...............C................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  F  L  Q  M  D  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  T  P  R  H  G  D  
                    Query_5328   181  AGAACTCACTGTTTCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGAGGGATACCCCAAGACATGGTGATC  270
V  88.0% (220/250)  IGHV3-48*03  227  ............A..........A..........................G................A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-21*01  13   ----------------------------------------------------------------------------------.......-  19

                                      ------------->                                
                                      P  W  G  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5328   271  CCTGGGGTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  316
J  97.4% (38/39)    IGHJ4*02     8    -------.....A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_249910

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           274     8e-76
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	242	3	3	0	0	100
Total	N/A	N/A	239	207	32	0	86.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  G  S  I  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_5329   4    CCCTGAGACTCTCCTGTTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAAT  93
V  86.6% (207/239)  IGHV4-59*01  50   .....TCC...A....CA......................T.GT.A...C....G.............C...................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R  
                    Query_5329   94   GGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGAC  183
V  86.6% (207/239)  IGHV4-59*01  140  ......GG.....C.ATT................C..C...........C.....................G.A.............AC.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G  
                    Query_5329   184  ACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGTG  273
V  86.6% (207/239)  IGHV4-59*01  230  .G...........G....G............T..............G............-------------------------------  288
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  93.3% (14/15)    IGHD3-22*01  7    ----------------------------------------------------------------------------..........A...  20

                                      ---------------------->                                  
                                      G  I  S  N  W  F  D  P  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_5329   274  GCATCTCCAACTGGTTCGACCCCCGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  330
D  93.3% (14/15)    IGHD3-22*01  21   .--------------------------------------------------------  21
J  94.0% (47/50)    IGHJ5*02     2    -------................T..........A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_249912

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           388     5e-110
IGHD6-6*01                                                                                            21.8    0.045 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCC	ATAGCAGCTCG	GATGGGGA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCATAGCAGCTCGGATGGGGAACTTTGACTCC	AAIAARMGNFDS	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	267	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  V  S  R  Y
                    Query_5330   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCCGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCGTCAGTAGGTA  90
V  93.4% (267/286)  IGHV1-69*01  6    ....................................T..........................................T....C..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        L  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  L  L  R  T  A  N  Y  A  Q
                    Query_5330   91   TCTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGATCATCCCTCTTTTAAGGACAGCAAACTACGCACA  180
V  93.4% (267/286)  IGHV1-69*01  96   .GC.................................G...........................A.C..TG.T.................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  V  H  E  S  T  S  T  V  Y  M  E  V  N  S  L  G  S  Q  D  T  A
                    Query_5330   181  GAAGTTCCAGGGCAGAGTCACGATTACCGTGCACGAATCCACGAGCACAGTCTACATGGAGGTGAACAGCCTGGGATCTCAGGACACGGC  270
V  93.4% (267/286)  IGHV1-69*01  186  .............................C.G..................C..........C...G.......A.....G..........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  A  A  I  A  A  R  M  G  N  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5330   271  CGTGTATTACTGTGCGGCCATAGCAGCTCGGATGGGGAACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  351
V  93.4% (267/286)  IGHV1-69*01  276  ................-----------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                  
D  100.0% (11/11)   IGHD6-6*01   5    -------------------...........---------------------------------------------------  15
J  97.7% (42/43)    IGHJ4*02     4    --------------------------------------.........A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_249913

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           374     8e-106
IGHD2-15*01                                                                                           37.2    1e-06 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGACTCCC	GGATATTGTCGTGGTGGTAGGTGCT	CCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGACTCCCGGATATTGTCGTGGTGGTAGGTGCTCCGGCTACTACTACGGTTTGGACGTC	ARDRTPGYCRGGRCSGYYYGLDV	244	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	245	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5331   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (245/251)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S 
                    Query_5331   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  97.6% (245/251)  IGHV4-31*03  139  ..........................................................A.......G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       E  S  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  R  T  P  G  Y  C 
                    Query_5331   181  GAGAGCCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCATATATTACTGTGCGAGAGATCGGACTCCCGGATATTGT  270
V  97.6% (245/251)  IGHV4-31*03  229  A...A..............................................G.G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.0% (23/25)    IGHD2-15*01  2    ---------------------------------------------------------------------------------.........  10

                                      ---CDR3-IMGT----------------------------->                                 
                                       R  G  G  R  C  S  G  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5331   271  CGTGGTGGTAGGTGCTCCGGCTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  345
D  92.0% (23/25)    IGHD2-15*01  11   A..........C....-----------------------------------------------------------  26
J  98.2% (54/55)    IGHJ6*02     8    --------------------.............A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_98387

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           280     1e-77
IGHD3-22*01                                                                                           14.1    8.9  
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGCCTGC	AGTAGTAATTACT	GTTATGACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGCCTGCAGTAGTAATTACTGTTATGACGACTACTTCTACGGTATGGACGTC	ARVACSSNYCYDDYFYGMDV	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	96	18	0	84.2
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	214	35	0	85.9


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  D  S  I  N  T  G  N  Y  Y  W  T  W  I  R  Q  R  P  E  K  G  
                    Query_5332   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCATCAACACTGGCAATTACTACTGGACCTGGATCCGCCAGCGCCCAGAGAAGGGCC  93
V  85.9% (214/249)  IGHV4-31*02  50   .....TCC...A..................G........G..G...TGG...........G..............A.....G........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  N  G  I  T  Y  Y  S  P  S  L  R  G  R  I  A  I  S  V  D  R  S  
                    Query_5332   94   TGGAGTGGATTGGATACATATATTACAATGGGATCACCTACTACAGCCCGTCCCTCCGGGGGCGAATTGCCATATCAGTAGACAGGTCTA  183
V  85.9% (214/249)  IGHV4-31*02  140  .............G.....C.......G.....G...........A..........AA.A.T...G..A...............C.....  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  K  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  G  T  Y  Y  C  A  R  V  A  C  S  S  N  Y  
                    Query_5332   184  AGAAACAATTCTCATTGAGGCTGAGCTCCGTGACTGCCGCGGACACGGGCACTTATTACTGTGCGAGAGTCGCCTGCAGTAGTAATTACT  273
V  85.9% (214/249)  IGHV4-31*02  230  ....C..G.....CC...A.........T...................C.GTG................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  84.6% (11/13)    IGHD3-22*01  17   -----------------------------------------------------------------------------...G..T......  29

                                      R3-IMGT------------------------>                                 
                                      C  Y  D  D  Y  F  Y  G  M  D  V  W  G  P  G  T  T  V  T  V  S  S 
                    Query_5332   274  GTTATGACGACTACTTCTACGGTATGGACGTCTGGGGCCCAGGGACCACGGTCACCGTCTCCTCA  338
J  96.4% (54/56)    IGHJ6*02     7    ---------......A.......................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_249918

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            280     1e-77
IGHD2-21*01                                                                                           18.0    0.60 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-21*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CAAGACTTACAACTT	TGGTGATGATCGCTA	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGGGACAAGACTTACAACTTTGGTGATGATCGCTACTATGATGCATTTGATTTG	TRDKTYNFGDDRYYDAFDL	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	11	1	0	91.7
CDR1-IMGT	27	50	24	19	5	0	79.2
FR2-IMGT	51	101	51	46	5	0	90.2
CDR2-IMGT	102	125	24	19	5	0	79.2
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	247	8	6	2	0	75
Total	N/A	N/A	233	206	27	0	88.4


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  G  T  Y  W  M  T  W  I  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 
                    Query_5333   15   TGTGCAGCCTCAGGTTTCACGTTTGGCACCTATTGGATGACATGGATCCGCCAGGCTCCAGGGAAGGGACTGGAGTGGGTGGCCAATATA  104
V  88.4% (206/233)  IGHV3-7*01   64   ...........T..A.....C...A.T.G...........GC...G......................G.................C...  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       K  G  D  G  S  K  T  Y  Y  M  D  S  V  K  G  R  F  T  I  S  R  D  N  A  R  N  S  L  Y  L 
                    Query_5333   105  AAAGGAGATGGAAGTAAGACATACTATATGGATTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCAGGAACTCACTGTATCTG  194
V  88.4% (206/233)  IGHV3-7*01   154  ..GCA..........G...A.......G....C..............A....................C....A................  243
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-----------------------CDR3-IMGT------------
                                       Q  M  N  S  L  R  V  E  D  T  A  F  Y  Y  C  T  R  D  K  T  Y  N  F  G  D  D  R  Y  Y  D 
                    Query_5333   195  CAAATGAACAGCCTCAGAGTCGAGGACACGGCTTTTTATTACTGTACGAGGGACAAGACTTACAACTTTGGTGATGATCGCTACTATGAT  284
V  88.4% (206/233)  IGHV3-7*01   244  ..............G....C.............G.G.........G....A..-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  86.7% (13/15)    IGHD2-21*01  10   --------------------------------------------------------------------.....G....T....-------  24
J  94.0% (47/50)    IGHJ3*01     1    --------------------------------------------------------------------------------------....  4

                                      ----------->                                  
                                       A  F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5333   285  GCATTTGATTTGTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  330
J  94.0% (47/50)    IGHJ3*01     5    ..T......G.C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_249919

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-20*01                                                                                           357     1e-100
IGHD3-22*01                                                                                           12.2    32    
IGHJ6*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-20*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGGGCACTG	GGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGATGGGGCACTGGGTTATTACTATGGTATCGGCGTC	VRDGALGYYYGIGV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5334   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGGCATGAGCTGGGTCCGCCAAGCTCCGGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-20*01  47   ............................................................................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  H  W  N  G  A  S  T  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  A  
                    Query_5334   91   AGTGGGTCTCTGGTATTCATTGGAATGGTGCAAGTACAGCTTATGCAGACTCTGTGAAGGGCCGATTCACCATTTCCAGAGACATTGCCA  180
V  95.6% (239/250)  IGHV3-20*01  137  .................A............GT..C....G.................................C..........AC....  226
                                      E  W  V  S  G  I  N  W  N  G  G  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  V  R  D  G  A  L  G  Y  Y  
                    Query_5334   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCCTTGTATCACTGTGTGCGAGATGGGGCACTGGGTTATTACT  270
V  95.6% (239/250)  IGHV3-20*01  227  ...............................................................C.A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R                       
D  100.0% (6/6)     IGHD3-22*01  20   --------------------------------------------------------------------------------......----  25
J  90.2% (46/51)    IGHJ6*02     12   --------------------------------------------------------------------------------------....  15

                                      ------------->                                 
                                      Y  G  I  G  V  W  G  R  G  T  T  V  P  V  S  S 
                    Query_5334   271  ATGGTATCGGCGTCTGGGGCCGAGGGACCACGGTCCCCGTCTCCTCA  317
J  90.2% (46/51)    IGHJ6*02     16   .C.....G.A...........A.............A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_329580

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            382     4e-108
IGHD1-26*01                                                                                           14.1    9.0   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCG	GTGGGAG	TCACCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATGCGGTGGGAGTCACCCCCTACTTTGACTAC	ARDAVGVTPYFDY	273	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	158	27	26	1	0	96.3
FR3-IMGT	159	272	114	103	11	0	90.4
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	280	262	18	0	93.6


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  L  V  S  R  N  G  A  A  W  N  W  
                    Query_5335   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACATGTGCCATCTCCGGGGACCTTGTCTCTAGGAACGGTGCTGCTTGGAATTGGA  90
V  93.6% (262/280)  IGHV6-1*01   26   .....................................C..................AG.........C...A.............C....  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  L  R  
                    Query_5335   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATATTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTCTGAGAG  180
V  93.6% (262/280)  IGHV6-1*01   116  ..............................................C....................................G...A.A  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      G  R  I  I  I  S  P  D  T  S  N  N  L  F  S  L  H  L  N  S  V  T  P  E  D  T  A  M  Y  Y  
                    Query_5335   181  GTCGAATAATCATCAGCCCAGACACTTCCAACAACCTCTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTATGTATTACT  270
V  93.6% (262/280)  IGHV6-1*01   206  .........C.....A.........A.....G....AG...........G..............................G.........  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><--------------CDR3-IMGT-------------->                                  
                                      C  A  R  D  A  V  G  V  T  P  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_5335   271  GTGCAAGAGATGCGGTGGGAGTCACCCCCTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  345
V  93.6% (262/280)  IGHV6-1*01   296  ..........-----------------------------------------------------------------  305
                                      C  A  R                                                                    
D  100.0% (7/7)     IGHD1-26*01  7    --------------.......------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ----------------------------.........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_168248

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           399     3e-113
IGHD3-22*01                                                                                           27.6    9e-04 
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TC	ACTATGAGAGTAGTGATTTTTAC	ACACA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCACTATGAGAGTAGTGATTTTTACACACATGATGGTTTTAATATC	ASHYESSDFYTHDGFNI	291	341	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	9	77	69	63	6	0	91.3
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	112	2	0	98.2
CDR3-IMGT (germline)	291	295	5	5	0	0	100
Total	N/A	N/A	287	271	16	0	94.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  T  S  G  Y  S  F  T  S  Y 
                    Query_5336   9    CAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGTGAGTCTCTGAGGATCTCCTGTAAGACCTCTGGATACAGCTTCACCAGCTAC  98
V  94.4% (271/287)  IGHV5-51*03  7    .............................A........G..........A.............GGT..............T.........  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       W  I  A  W  V  R  Q  M  P  G  K  G  L  E  S  M  G  I  I  Y  P  S  D  S  D  T  T  Y  S  P 
                    Query_5336   99   TGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTCCATGGGCATCATCTATCCCAGTGACTCCGATACCACATACAGCCCG  188
V  94.4% (271/287)  IGHV5-51*03  97   .......G...................................GG.....G...........TG.......T.......G..........  186
                                       W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  R  A  S  D  T  A 
                    Query_5336   189  TCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACACCGCC  278
V  94.4% (271/287)  IGHV5-51*03  187  .........................................................................A................  276
                                       S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A 

                                      -----------><--------------------CDR3-IMGT-------------------->                           
                                       M  Y  Y  C  A  S  H  Y  E  S  S  D  F  Y  T  H  D  G  F  N  I  W  G  Q  G  T  M  V  T  V 
                    Query_5336   279  ATGTATTACTGTGCGAGTCACTATGAGAGTAGTGATTTTTACACACATGATGGTTTTAATATCTGGGGCCAAGGGACAATGGTCACCGTC  368
V  94.4% (271/287)  IGHV5-51*03  277  .................-------------------------------------------------------------------------  293
                                       M  Y  Y  C  A                                                                            
D  87.0% (20/23)    IGHD3-22*01  6    -------------------.......T.......G..A....------------------------------------------------  28
J  96.0% (48/50)    IGHJ3*02     1    -----------------------------------------------.....C....G................................  43

                                             
                                       S  S  
                    Query_5336   369  TCTTCAG  375
J  96.0% (48/50)    IGHJ3*02     44   .......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_168249

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*02                                                                                            332     4e-93
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*02	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	N/A	N/A	TTCTAAG	TACAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGTTCTAAGTACAACTCCTACAGTATGGACATG	AHSSKYNSYSMDM	263	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	22	8	0	73.3
FR2-IMGT	77	127	51	47	4	0	92.2
CDR2-IMGT	128	148	21	15	6	0	71.4
FR3-IMGT	149	262	114	103	11	0	90.4
CDR3-IMGT (germline)	263	270	8	8	0	0	100
Total	N/A	N/A	270	241	29	0	89.3


Alignments

                                     <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  P  I  P  M  N  V  A  W  I  R
                    Query_5337  1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGTCCTATTCCAATGAATGTGGCCTGGATCCG  90
V  89.3% (241/270)  IGHV2-5*02  30   ............................................................CA...G.GG.G..GG.....G.........  119
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                     -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                       Q  A  P  G  K  A  L  E  W  L  A  L  F  Q  M  D  D  D  E  L  H  S  P  S  L  R  S  R  L  T
                    Query_5337  91   CCAGGCCCCAGGAAAGGCCCTTGAGTGGCTTGCACTCTTTCAAATGGATGATGATGAGCTCCACAGCCCATCTCTGCGAAGCAGGCTCAC  180
V  89.3% (241/270)  IGHV2-5*02  120  T...C................G...............A..T.TTG..........A...G.T..............AAG...........  209
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                     ---------------------FR3-IMGT----------------------------------------------------><-------
                                       I  T  K  G  T  S  N  N  Q  V  V  L  S  M  T  N  M  D  P  V  D  T  G  T  Y  Y  C  A  H  S
                    Query_5337  181  CATCACCAAGGGCACCTCCAACAACCAGGTAGTCCTTTCAATGACCAACATGGACCCTGTGGACACAGGCACATACTACTGTGCACACAG  270
V  89.3% (241/270)  IGHV2-5*02  210  ...........A.........A........G......A..............................C......T..............  299
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                     -------CDR3-IMGT-------------->                                 
                                       S  K  Y  N  S  Y  S  M  D  M  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5337  271  TTCTAAGTACAACTCCTACAGTATGGACATGTGGGGCCAGGGGACCACGGTCACCGTCTCCTCA  334
J  89.5% (51/57)    IGHJ6*02    6    -------...T...A....G........G.C........A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_48137

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           408     4e-116
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	73	1	0	98.6
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	104	10	0	91.2
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	277	16	0	94.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  
                    Query_5338   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCTTGTAAGGGTTCTGGATACACCTTTACCA  91
V  94.5% (277/293)  IGHV5-51*03  2    .............................................................C...................G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  
                    Query_5338   92   GCTACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACA  181
V  94.5% (277/293)  IGHV5-51*03  92   ............G.......................A...................................A....G.....A......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  H  V  T  I  S  A  D  R  S  I  T  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  
                    Query_5338   182  GCCCGTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAGGTCCATCACGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACA  271
V  94.5% (277/293)  IGHV5-51*03  182  ...................G...................A........GC...........G...............A.....T......  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_5338   272  CCGCCGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  361
V  94.5% (277/293)  IGHV5-51*03  272  .....A.G...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD6-19*01  5    --------------------------............----------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_5338   362  CCTCAG  367
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_309129

Length=442
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           382     4e-108
IGHD3-3*01                                                                                            16.1    2.9   
IGHJ5*01                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAAACAGTCGGCACACTGAGA	ATTATACC	CCCACGTCGGACGTTCTAG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAAACAGTCGGCACACTGAGAATTATACCCCCACGTCGGACGTTCTAGGGTTCGACTCC	ARRNSRHTENYTPTSDVLGFDS	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	267	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_5339   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGTTA  90
V  92.1% (267/290)  IGHV5-51*01  6    .......................................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  W  R  Q  M  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_5339   91   CTGGATCGCTTGGTGGCGCCAGATGCCCGGGAAAGGCCTGGAATTAATGGGGATCATCTACCCTGGTGACTCTGATACTAGATACAATCC  180
V  92.1% (267/290)  IGHV5-51*01  96   ........GC...GT...........................G.GG..............T.................C.......GC..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  A  T  I  Y  A  D  K  S  I  S  T  A  Y  L  Q  M  S  S  L  K  A  S  D  T  A
                    Query_5339   181  GTCCTTCCAAGGTCAGGCCACCATTTATGCCGACAAGTCCATCAGCACCGCCTACCTGCAGATGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  92.1% (267/290)  IGHV5-51*01  186  ............C....T......C.CA.................................TG...........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------------CDR3-IMGT--------------------------->           
                                        K  Y  F  C  A  R  R  N  S  R  H  T  E  N  Y  T  P  T  S  D  V  L  G  F  D  S  W  G  Q  G
                    Query_5339   271  CAAATACTTCTGTGCGAGACGAAACAGTCGGCACACTGAGAATTATACCCCCACGTCGGACGTTCTAGGGTTCGACTCCTGGGGCCAGGG  360
V  92.1% (267/290)  IGHV5-51*01  276  ..TG..T.A...........----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-3*01   24   -----------------------------------------........-----------------------------------------  31
J  97.8% (44/45)    IGHJ5*01     7    --------------------------------------------------------------------...................A..  28

                                                             
                                        T  L  V  T  V  S  S  
                    Query_5339   361  AACCCTGGTCACCGTCTCCTCAG  383
J  97.8% (44/45)    IGHJ5*01     29   .......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 43549488


Query= Query_168244

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           322     2e-90
IGHD1-26*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGC	ATAGTGGGAGCTACT	TGT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGCATAGTGGGAGCTACTTGTACTTCTTTGACTAC	ARLHSGSYLYFFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  T  S  G  F  T  V  I  N  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5340   1    GGTCCCTGAGACTCTCCTGTTCGACCTCTGGATTCACCGTCATTAATAATTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.2% (225/244)  IGHV3-53*01  47   ....................G.AG.......G..........G..GC..C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  Y  T  N  G  R  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_5340   91   AGTGGGTCTCAGCCATTTATACCAATGGTCGCACATTCTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGA  180
V  92.2% (225/244)  IGHV3-53*01  137  ............TT.......G.GG....A......A........................A............................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  E  M  N  S  L  R  A  A  D  T  A  V  Y  Y  C  A  R  L  H  S  G  S  Y  L  Y  
                    Query_5340   181  ACACGCTGTATCTTGAAATGAACAGCCTGAGAGCCGCGGACACGGCCGTGTATTATTGTGCGAGGCTGCATAGTGGGAGCTACTTGTACT  270
V  92.2% (225/244)  IGHV3-53*01  227  ..............C.....................A..................C........--------------------------  290
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  100.0% (15/15)   IGHD1-26*01  4    ---------------------------------------------------------------------...............------  18
J  93.8% (45/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      F  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_5340   271  TCTTTGACTACTGGGGCCAGGGGGCCCTGGTCACCGTCTCCTCAG  315
J  93.8% (45/48)    IGHJ4*02     4    A.....................AA.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_168245

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*02                                                                                            374     9e-106
IGHD2-15*01                                                                                           18.0    0.70  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*02	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCTGGCGG	TTGTAGTTCTGGTTGCTACTA	AGGGAGGGGGT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCTGGCGGTTGTAGTTCTGGTTGCTACTAAGGGAGGGGGTTACGGCATGGACGTC	ARVLAVVVLVATKGGGYGMDV	290	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	71	4	0	94.7
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	102	12	0	89.5
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	267	28	0	90.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  R  A  S  G  Y  T  L  T 
                    Query_5341   2    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAGGGCTTCTGGGTACACCCTCACC  91
V  90.5% (267/295)  IGHV1-2*02   1    .....G.....G...........G...........................................A.........A......T.....  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  H  Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  A  T  D  S 
                    Query_5341   92   GACCACTATGTCCACTGGGTGCGACAGGCCCCTGGACAGGGCCTTGAGTGGATGGGATGGATCAACCCTAATAGCGGTGCCACGGACTCT  181
V  90.5% (267/295)  IGHV1-2*02   91   .G.T.....A.G..........................A..G.............................C..T....G...AA...A.  180
                                       G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  I  N  P  A  Y  M  E  L  I  R  L  R  V  D  D 
                    Query_5341   182  GCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAACCCAGCCTACATGGAACTGATCAGACTGAGAGTCGACGAC  271
V  90.5% (267/295)  IGHV1-2*02   181  .................................................G.A.............G....G...G......TCT......  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                      -----------------><--------------------------CDR3-IMGT-------------------------->         
                                       T  A  I  Y  Y  C  A  R  V  L  A  V  V  V  L  V  A  T  K  G  G  G  Y  G  M  D  V  W  G  Q 
                    Query_5341   272  ACGGCCATTTATTACTGTGCGAGAGTTCTGGCGGTTGTAGTTCTGGTTGCTACTAAGGGAGGGGGTTACGGCATGGACGTCTGGGGCCAA  361
V  90.5% (267/295)  IGHV1-2*02   271  ......G.G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  81.0% (17/21)    IGHD2-15*01  7    ----------------------------------.......GG....A...G...-----------------------------------  27
J  97.9% (47/48)    IGHJ6*02     15   ------------------------------------------------------------------.....T..................  38

                                                              
                                       G  T  T  V  T  V  S  S 
                    Query_5341   362  GGGACCACGGTCACCGTCTCCTCA  385
J  97.9% (47/48)    IGHJ6*02     39   ........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_168246

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           311     4e-87
IGHJ1*01                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	N/A	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GGGCGGGTCCTG	TCCAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGAAGAGGGGCGGGTCCTGTCCAGGAT	GRGAGPVQD	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	224	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  D  F  S  N  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5342   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGACTTCAGTAACTACTGGATGCACTGGGTCCGCCAAGCTCCAGGCAAGGGGCTGG  90
V  90.0% (224/249)  IGHV3-74*01  47   ...................................AC........G.................................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  H  S  N  S  D  G  T  N  T  A  Y  V  D  S  V  K  G  R  F  T  I  S  R  G  N  A  
                    Query_5342   91   TGTGGGTCTCACACAGCAACAGTGATGGGACTAACACAGCCTACGTGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGGCAACGCCG  180
V  90.0% (224/249)  IGHV3-74*01  137  ............GT.TT..T..........G..G....AG.....C...................................A.......A  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      E  N  T  L  Y  L  Q  L  K  S  L  R  V  D  D  T  A  V  Y  Y  C  G  R  G  A  G  P  V  Q  D  
                    Query_5342   181  AGAACACGTTGTATCTGCAGTTGAAGAGTCTGAGAGTCGACGACACGGCTGTTTATTATTGTGGAAGAGGGGCGGGTCCTGTCCAGGATT  270
V  90.0% (224/249)  IGHV3-74*01  227  ........C..........AA....C..........C...G...........G.....C....C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  88.1% (37/42)    IGHJ1*01     11   ---------------------------------------------------------------------------------.....C.C.  19

                                                                       
                                      W  G  Q  G  T  L  V  V  V  S  S  
                    Query_5342   271  GGGGCCAGGGCACCCTGGTCGTCGTCTCGTCAG  303
J  88.1% (37/42)    IGHJ1*01     20   ....................AC......C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_168240

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           305     3e-85
IGHD3-10*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGG	CCGAAGGTACCT	TGGGTCGGGGAG	ATTTATACCGTTTTCG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCGAAGGTACCTTGGGTCGGGGAGATTTATACCGTTTTCGGACTAT	ARGRRYLGSGRFIPFSDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	220	25	0	89.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  E  V  Y  G  G  S  F  N  N  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5343   1    ACCCTGTCCCTCACCTGCGAAGTCTATGGTGGGTCCTTCAATAATTACTTCTGGAACTGGATCCGCCAGCCCCCAGGAAAGGGTCTGGAG  90
V  89.8% (220/245)  IGHV4-34*01  49   ...................CT...................G.GG.....A.....G.....................G.....G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  V  S  H  S  G  N  T  N  Y  N  L  S  L  K  S  R  V  T  I  S  L  D  T  S  E  N 
                    Query_5343   91   TGGATTGGGGAAGTCAGTCATAGTGGCAACACCAACTACAACCTGTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCGAGAAC  180
V  89.8% (220/245)  IGHV4-34*01  139  ............A...A.........A.G..............C............................G...........A.....  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  Y  S  L  N  L  A  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  Y  L  G  S  G  R 
                    Query_5343   181  CAGTACTCCCTGAACCTGGCTTCTGTGGCCGCCGCGGACACGGCTGTCTACTACTGTGCGAGGGGCCGAAGGTACCTTGGGTCGGGGAGA  270
V  89.8% (220/245)  IGHV4-34*01  229  ....T.........G...AGC......A...................G..T...........A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  91.7% (11/12)    IGHD3-10*01  10   -----------------------------------------------------------------------------...T........-  21

                                      -------------------->                                  
                                       F  I  P  F  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5343   271  TTTATACCGTTTTCGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.5% (39/40)    IGHJ4*02     9    ---------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_168241

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           321     6e-90
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_5344   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_5344   91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_5344   181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.8% (225/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_5344   271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_168242

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5345   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5345   91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*01  139  ........GT........T.......G...............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_5345   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.5% (234/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5345   271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_168243

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            378     3e-107
IGHD1-26*01                                                                                           12.2    35    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y
                    Query_5346   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACCACTTA  90
V  91.7% (266/290)  IGHV1-8*01   6    ..................G...............................................T........C..........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F  A  Q
                    Query_5346   91   TGATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTTGCACA  180
V  91.7% (266/290)  IGHV1-8*01   96   .................................A..G..............A..............C.G...T..........A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D  T  A
                    Query_5346   181  GAGATTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGACACGGC  270
V  91.7% (266/290)  IGHV1-8*01   186  ..AG...C............................C.....A.................GC............G..C..AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_5346   271  CATATATTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  352
V  91.7% (266/290)  IGHV1-8*01   276  .G.G................--------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   -----------------------------...G.....--------------------------------------------  18
J  100.0% (40/40)   IGHJ5*02     11   ------------------------------------------........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_194938

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         391     6e-111
IGHD6-19*01                                                                                           18.0    0.63  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	CCACGGCTAC	AGCAGTGGC	GC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGCCACGGCTACAGCAGTGGCGCTGACTAC	GSHGYSSGADY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	288	269	19	0	93.4


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  V  S  E  F  S  F  T  N  F
                    Query_5347     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGTTTCTGAATTCAGCTTTACCAACTT  90
V  93.4% (269/288)  IGHV5-10-1*01  6    .................................................................G.....G..A...........G..A  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  D  Y  S  P
                    Query_5347     91   CTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAGGATTGATCCTAGTGACTCTTATACCGACTACAGCCC  180
V  93.4% (269/288)  IGHV5-10-1*01  96   ........G..........................................G...........................A..........  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  M  W  S  S  L  R  A  S  D  S  A
                    Query_5347     181  GTCCTTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCATCACAACTGCCTACCTAATGTGGAGCAGCCTGCGGGCCTCGGACAGCGC  270
V  93.4% (269/288)  IGHV5-10-1*01  186  ............................................GC...........GCA.............AA...........C...  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------CDR3-IMGT----------->                                  
                                          I  Y  Y  C  G  S  H  G  Y  S  S  G  A  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_5347     271  CATTTATTATTGTGGGAGCCACGGCTACAGCAGTGGCGCTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  350
V  93.4% (269/288)  IGHV5-10-1*01  276  ...G.....C....C...--------------------------------------------------------------  293
                                          M  Y  Y  C  A                                                                 
D  100.0% (9/9)     IGHD6-19*01    7    ----------------------------.........-------------------------------------------  15
J  97.6% (40/41)    IGHJ4*02       8    ---------------------------------------..............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_114878

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           318     6e-89
IGHD3-9*01                                                                                            27.6    8e-04
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGAACGGTCGCGATACA	ACGATATTTTGACT	AATTACAGAGACTCATATCCCC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGAACGGTCGCGATACAACGATATTTTGACTAATTACAGAGACTCATATCCCCTTGAGTTC	ARVERSRYNDILTNYRDSYPLEF	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5348   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTGACTTTGGCATGCATTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-33*01  47   ............................................AG..A.........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  D  I  W  S  D  G  S  K  E  N  Y  A  N  F  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5348   91   AGTGGCTGGCAGATATCTGGTCCGATGGAAGCAAAGAAAACTATGCAAATTTCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCTA  180
V  90.8% (226/249)  IGHV3-33*01  137  .....G......T...A....AT........T..TA..T........G.C.C....................................C.  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      R  N  R  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  E  R  S  R  Y  N  
                    Query_5348   181  GGAACAGACTATATCTACAAATTAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGTCGAACGGTCGCGATACAACG  270
V  90.8% (226/249)  IGHV3-33*01  227  A.....CG..G.....G.....G..............................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD3-9*01   6    ---------------------------------------------------------------------------------------...  8

                                      --CDR3-IMGT----------------------------->                                  
                                      D  I  L  T  N  Y  R  D  S  Y  P  L  E  F  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_5348   271  ATATTTTGACTAATTACAGAGACTCATATCCCCTTGAGTTCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  345
D  100.0% (14/14)   IGHD3-9*01   9    ...........----------------------------------------------------------------  19
J  92.9% (39/42)    IGHJ4*02     7    ---------------------------------....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_114879

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           375     3e-106
IGHD3-3*01                                                                                            23.8    0.011 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACCGCCCCGCGAG	TTTTTGGAGTGG	GGCAGACCCT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACCGCCCCGCGAGTTTTTGGAGTGGGGCAGACCCTTACGGTATGGACGTC	ARYRPASFWSGADPYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	244	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  N  L  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5349   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAACTTGAACTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  98.4% (244/248)  IGHV3-21*01  47   ...................................................G.A...............................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5349   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAGTCACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (244/248)  IGHV3-21*01  137  ................................T.........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Y  R  P  A  S  F  W  
                    Query_5349   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGATACCGCCCCGCGAGTTTTTGGA  270
V  98.4% (244/248)  IGHV3-21*01  227  ....................................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD3-3*01   10   ----------------------------------------------------------------------------------........  17

                                      -IMGT----------------------->                                 
                                      S  G  A  D  P  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5349   271  GTGGGGCAGACCCTTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (12/12)   IGHD3-3*01   18   ....----------------------------------------------------------  21
J  100.0% (48/48)   IGHJ6*02     15   --------------................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_114874

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ1*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GACTCATGGGGGCGACTTTCG	ATGATGGTACTGGTTATTAC	C	CTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGGGGGCGACTTTCGATGATGGTACTGGTTATTACCCTGAATACTTCGACCAC	ARLMGATFDDGTGYYPEYFDH	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	224	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  R  F  G  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5350   1    GGTCCCTGAGACTCTCCTGTGCGGGCTCTGGATTCAGGTTTGGCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (224/246)  IGHV3-23*01  47   ......................A.C...........CC...A...............G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  T  I  S  G  S  G  A  S  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  S  D  T  S  
                    Query_5350   91   AGTGGCTCGCAACTATTAGCGGTAGTGGTGCTTCCACATACTACGCAGACTCCGTGAGGGGCCGGTTCACCATCTCCAGCGACACTTCCG  180
V  91.1% (224/246)  IGHV3-23*01  137  .....G..T..G.......T..........G.AG.......................A.....................A....A....A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      A  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  L  M  G  A  T  F  D  
                    Query_5350   181  CGAACACACTGTATTTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTGTATTACTGTGCGAGACTCATGGGGGCGACTTTCGATG  270
V  91.1% (224/246)  IGHV3-23*01  227  A......G......C.....................C...............A.............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.0% (18/20)    IGHD3-22*01  9    ---------------------------------------------------------------------------------------...  11

                                      DR3-IMGT-------------------------->                                  
                                      D  G  T  G  Y  Y  P  E  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5350   271  ATGGTACTGGTTATTACCCTGAATACTTCGACCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  339
D  90.0% (18/20)    IGHD3-22*01  12   ..A...G..........----------------------------------------------------  28
J  96.1% (49/51)    IGHJ1*01     2    ------------------...........C.G.....................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_114875

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           25.7    0.003
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTACTATAATCCTAGTGGTTTTTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACTATAATCCTAGTGGTTTTTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGFYGYWYFDL	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  S  G  S  I  N  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_5351   4    CCCTGAGACTCTCCTGTACTGTCTCTAGTGGCTCCATCAATAATTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  94.7% (231/244)  IGHV4-59*01  50   .....TCC...A....C.........G............G..G...C...........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  D  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_5351   94   GGATTGGGGACATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAACC  183
V  94.7% (231/244)  IGHV4-59*01  140  ........T.T..............................................................A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  F  Y  
                    Query_5351   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATTACTATAATCCTAGTGGTTTTTACG  273
V  94.7% (231/244)  IGHV4-59*01  230  ..............................................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  84.0% (21/25)    IGHD3-22*01  4    ----------------------------------------------------------------.......G..AG........A....-  28

                                      ------------------->                                  
                                      G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_5351   274  GGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  327
J  100.0% (52/52)   IGHJ2*01     2    --....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_114876

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           321     6e-90
IGHD3-10*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCC	TTCGGGG	GGTGACAGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTCGGGGGGTGACAGGTTTGACTAC	ARDPSGGDRFDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  N  V  S  G  G  S  I  S  T  F  H  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_5352   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCATCAGTACTTTCCACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*01  49   ...................C.......................G..A.T..............................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  V  S  F  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_5352   91   TGGATTGGGTCTGTCTCTTTTAGCGGGAGCACCAACTACAATCCCTCCCTCAAGAGTCGAGTTTCCATATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*01  139  ..........A.A...A..AC..T.................C....................CA..........................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  D  P  S  G  G  D  R  F  D 
                    Query_5352   181  CAGTTCTCCCTGAAACTGAACTCCGTGACGGCTGCGGACACGGCCGTTTATTTCTGTGCGAGAGATCCTTCGGGGGGTGACAGGTTTGAC  270
V  91.8% (225/245)  IGHV4-59*01  229  ..............G....G...T.....C.................G....A............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-10*01  13   --------------------------------------------------------------------.......---------------  19
J  97.7% (42/43)    IGHJ4*02     6    ------------------------------------------------------------------------------------......  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5352   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  307
J  97.7% (42/43)    IGHJ4*02     12   ................................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_114877

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            321     6e-90
IGHD1-26*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CG	GTGGGACCTACT	TATTCTTAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGTGGGACCTACTTATTCTTATTACTTTGACTAC	ARAVGPTYSYYFDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  A  G  S  I  D  S  S  T  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_5353   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGCTGGCTCCATCGACAGTAGTACCTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.5% (226/247)  IGHV4-4*02   49   ............................G..........AG........A........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  L  G  E  I  D  H  S  G  S  T  T  Y  N  P  S  L  Q  S  R  V  T  I  A  V  D  K  S  N 
                    Query_5353   91   GAGTGGCTTGGCGAAATCGATCATAGTGGGAGCACCACCTACAACCCGTCCCTCCAGAGTCGAGTCACCATAGCGGTGGACAAATCCAAC  180
V  91.5% (226/247)  IGHV4-4*02   139  ......A....G......T..................A................A.................T.A..A.....G.....G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  L  F  S  V  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  V  G  P  T  Y  S  Y 
                    Query_5353   181  AATCTGTTCTCCGTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCCGTTTATTATTGTGCGAGAGCGGTGGGACCTACTTATTCTTAT  270
V  91.5% (226/247)  IGHV4-4*02   229  ..C.A.......C.........G...........................G.....C..........-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  91.7% (11/12)    IGHD1-26*01  7    ---------------------------------------------------------------------......G.....---------  18

                                      ----------->                                  
                                       Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5353   271  TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (46/46)   IGHJ4*02     3    ..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_114870

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            322     2e-90
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ6*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAGG	ATTACTATGATAGAAGT	CGTCACGACGAATT	CGGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCAGGATTACTATGATAGAAGTCGTCACGACGAATTCGGTCTGGACGTC	ARDQDYYDRSRHDEFGLDV	247	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	132	27	17	4	6	63
FR3-IMGT	133	246	114	110	4	0	96.5
CDR3-IMGT (germline)	247	254	8	8	0	0	100
Total	N/A	N/A	254	232	16	6	91.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  D  S  F  S  S  D  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_5354   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCATTCAGCAGCGATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  91.3% (232/254)  IGHV4-4*02   49   ..................G............G...CA.......TAG.......................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><--------CDR2-IMGT--------><-----------------------------------------------
                                       E  W  I  G  E  V  F  D  S  D  S  G  S  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K 
                    Query_5354   91   GAGTGGATTGGGGAAGTCTTTGATAGTGATAGTGGGAGCGCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAG  180
V  91.3% (232/254)  IGHV4-4*02   139  ...............A...A.C....------.......A..................................................  222
                                       E  W  I  G  E  I  Y  H  S        G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K 

                                      -----FR3-IMGT----------------------------------------------------><-----------------------
                                       S  N  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  D  Y  Y  D 
                    Query_5354   181  TCCAACAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGAGAGACCAGGATTACTATGAT  270
V  91.3% (232/254)  IGHV4-4*02   223  .....G................A.....G...........................G.................----------------  296
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                   
D  94.1% (16/17)    IGHD3-22*01  3    -------------------------------------------------------------------------------...........  13

                                      CDR3-IMGT----------------------->                                 
                                       R  S  R  H  D  E  F  G  L  D  V  W  G  P  G  T  T  V  A  V  S  S 
                    Query_5354   271  AGAAGTCGTCACGACGAATTCGGTCTGGACGTCTGGGGCCCAGGGACCACGGTTGCCGTCTCCTCA  336
D  94.1% (16/17)    IGHD3-22*01  14   ..T...------------------------------------------------------------  19
J  91.3% (42/46)    IGHJ6*02     17   --------------------....A...............A............CA...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_114871

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           425     3e-121
IGHD2-2*02                                                                                            19.9    0.18  
IGHJ5*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAAAGTGGCGGGGA	ACCAGCTGTTATA	AAGAGCGCTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCC	ARGKWRGTSCYKERCWFDP	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	112	2	0	98.2
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	292	282	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  S  
                    Query_5355   2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTAGCA  91
V  96.6% (282/292)  IGHV5-51*03  2    ..G..................................................................G...........G.....C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  R  Y  
                    Query_5355   92   ACTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATAATCTATCCTGGTGACTCTGAGACCAGATACA  181
V  96.6% (282/292)  IGHV5-51*03  92   G...........G.............................................C....................T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_5355   182  GACCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  96.6% (282/292)  IGHV5-51*03  182  .C........................................................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  M  Y  Y  C  A  R  G  K  W  R  G  T  S  C  Y  K  E  R  C  W  F  D  P  W  G  Q  G  T  
                    Query_5355   272  CCGCCATGTATTATTGTGCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCCTGGGGCCAGGGAACCC  361
V  96.6% (282/292)  IGHV5-51*03  272  .............C........--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  92.3% (12/13)    IGHD2-2*02   17   --------------------------------------........C....---------------------------------------  29
J  100.0% (47/47)   IGHJ5*02     5    -------------------------------------------------------------.............................  33

                                                        
                                      L  V  T  V  S  S  
                    Query_5355   362  TGGTCACCGTCTCCTCAG  379
J  100.0% (47/47)   IGHJ5*02     34   ..................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_114872

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            352     3e-99
IGHD6-13*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGTCCAC	TATAGCACCAGCTGGTA	TC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGTCCACTATAGCACCAGCTGGTATCACTTTGACTAC	ARGVHYSTSWYHFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5356   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTGACTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-7*01   47   ............................................AG............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  N  E  Q  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5356   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAATGAGCAACACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (237/249)  IGHV3-7*01   137  ..............................G....A..T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  H  M  N  S  L  R  V  E  D  T  A  L  Y  F  C  A  R  G  V  H  Y  S  T  S  
                    Query_5356   181  AGAACTCACTTTATTTGCACATGAACAGCCTGAGAGTCGAGGACACGGCTCTGTATTTCTGTGCGAGAGGAGTCCACTATAGCACCAGCT  270
V  95.2% (237/249)  IGHV3-7*01   227  ..........G...C....A................C.............G......A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  94.1% (16/17)    IGHD6-13*01  4    -----------------------------------------------------------------------------.......G.....  16

                                      ---------------->                                  
                                      W  Y  H  F  D  Y  W  G  Q  G  T  L  I  S  A  S  S  
                    Query_5356   271  GGTATCACTTTGACTACTGGGGCCAGGGAACCCTGATCAGTGCCTCCTCAG  321
D  94.1% (16/17)    IGHD6-13*01  17   ....-----------------------------------------------  20
J  91.1% (41/45)    IGHJ4*02     4    ------.............................G...CC.T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_114873

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           344     6e-97
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGTCGTC	ATTACGATTTTTGGAGTGGTT	TTGACGCCACGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGTCGTCATTACGATTTTTGGAGTGGTTTTGACGCCACGTACTACTTTGACTTC	ARGRHYDFWSGFDATYYFDF	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  H  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5357   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTCACTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*08  49   .............................................T...A........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  D  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_5357   91   TGGATTGGGTATATCGACTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAGAGC  180
V  95.5% (231/242)  IGHV4-59*08  139  ...............T.T...............A..................................A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       H  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  H  Y  D  F  W  S  G 
                    Query_5357   181  CACTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTTTATTACTGTGCGAGGGGTCGTCATTACGATTTTTGGAGTGGT  270
V  95.5% (231/242)  IGHV4-59*08  229  ..G...........G....G...........................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (21/21)   IGHD3-3*01   3    ----------------------------------------------------------------------....................  22

                                      GT------------------------>                                  
                                       F  D  A  T  Y  Y  F  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_5357   271  TTTGACGCCACGTACTACTTTGACTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  331
D  100.0% (21/21)   IGHD3-3*01   23   .------------------------------------------------------------  23
J  95.8% (46/48)    IGHJ4*02     1    -------------............A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_45325

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            346     2e-97
IGHD1-20*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCAT	TAACTGGAACG	GACACCCATACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCATTAACTGGAACGGACACCCATACAACTTTGACTCC	ARAINWNGHPYNFDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	56	27	25	2	0	92.6
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  G  S  I  T  S  S  Y  W  W  T  W  V  R  Q  P  P  G  K  G  
                    Query_5358   1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCACCAGTAGTTACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  94.4% (235/249)  IGHV4-4*02   47   ..A.....TCC...A...........................G.......A.........G.............................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  S  A  N  T  N  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  K  S  
                    Query_5358   91   TGGAGTGGATTGGGGAAATCTATCATAGTGCGAACACCAACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCAGTAGACAAGTCCA  180
V  94.4% (235/249)  IGHV4-4*02   137  ..............................G..G...................................C....................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  R  L  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  N  W  N  G  H  
                    Query_5358   181  AGAACCAGTTCTCCCTGAGGCTGACCTCTCTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCCATTAACTGGAACGGACACC  270
V  94.4% (235/249)  IGHV4-4*02   227  ..................A.....G....G.......................................---------------------  295
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD1-20*01  5    -------------------------------------------------------------------------...........------  15

                                      ---------------->                                  
                                      P  Y  N  F  D  S  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_5358   271  CATACAACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  321
J  95.6% (43/45)    IGHJ4*02     4    ------.........A...............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_45327

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           263     2e-72
IGHD2-15*01                                                                                           12.2    32   
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TGGTGG	CGGACGGGGGCTCGATTGGGGTGCGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTGGCGGACGGGGGCTCGATTGGGGTGCGGTGGTTCGACACC	ARLVADGGSIGVRWFDT	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	96	18	0	84.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	206	38	0	84.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  I  R  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  T  L  E 
                    Query_5359   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGCCTCCATTAGAAGTTATTACTGGAGTTGGGTTCGCCAGCCCCCCGGCAAGACACTGGAG  90
V  84.4% (206/244)  IGHV4-59*08  49   ...................C...........G......C..T.....C........C...A.C..G........A..G...GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  F  H  T  G  T  T  N  Y  H  P  S  L  K  S  R  V  T  I  S  S  D  T  S  K  N 
                    Query_5359   91   TGGATTGGCTATTTCTTTCACACCGGGACCACCAATTACCATCCCTCCCTCAAGAGTCGAGTCACCATTTCATCAGACACGTCCAAGAAC  180
V  84.4% (206/244)  IGHV4-59*08  139  ........G...A...A.T...GT....G......C...A.C..........................A...GT................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       I  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  V  A  D  G  G  S  I  G 
                    Query_5359   181  ATCTTCTCATTGACTCTGACGTCTGTGACCGCCGCAGACACGGCCGTCTATTTTTGTGCGAGACTGGTGGCGGACGGGGGCTCGATTGGG  270
V  84.4% (206/244)  IGHV4-59*08  229  CAG.....CC...AG....GC..........................G....AC..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-15*01  13   ----------------------------------------------------------------......--------------------  18

                                      ----------------->                                  
                                       V  R  W  F  D  T  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_5359   271  GTGCGGTGGTTCGACACCTGGGGCCAGGGAACGCTGGTCAGCGTCTCATCAG  322
J  91.3% (42/46)    IGHJ5*02     6    ------.........C................C.......C......C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_52768

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           388     5e-110
IGHD2-15*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TT	TAGCTGC	GGTGAGTCCGAGTAGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTGCGGTGAGTCCGAGTAGTTTCTACTACGGTTTGGACGTC	ARDLAAVSPSSFYYGLDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  Y  G  Y  T  F  S  S  Y 
                    Query_5360   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCTTATGGTTACACCTTTAGCAGTTAC  91
V  92.8% (269/290)  IGHV1-18*04  7    ...............................................................G...C..............C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  D  T  S  Y  A  Q 
                    Query_5360   92   GGTATCACCTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGCTGGATCAGCGGTTATAATGGTGACACAAGCTATGCACAG  181
V  92.8% (269/290)  IGHV1-18*04  97   .......G.........A..............A.................A..........C...C......A......A..........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  K  G  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  S  D  D  T  A 
                    Query_5360   182  ATGGTCCGGGACAAAGGCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.8% (269/290)  IGHV1-18*04  187  .A.C...A..G..G..T...........C....................C..........C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  A  V  S  P  S  S  F  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T 
                    Query_5360   272  GTGTATTACTGTGCGAGAGATTTAGCTGCGGTGAGTCCGAGTAGTTTCTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACC  361
V  92.8% (269/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (7/7)     IGHD2-15*01  19   ----------------------.......-------------------------------------------------------------  25
J  98.1% (51/52)    IGHJ6*02     11   -----------------------------------------------..........A................................  53

                                               
                                       V  S  S 
                    Query_5360   362  GTCTCCTCA  370
J  98.1% (51/52)    IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_45321

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           248     8e-68
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	ARGLLIEDPNYVWGSFRRNHNCYTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	92	22	0	80.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	201	43	0	82.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  R  L  E 
                    Query_5361   1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGAGACTGGAG  90
V  82.4% (201/244)  IGHV4-59*01  49   ..................A....C.......G.......A...G..........AG....A.C........C.......A.G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_5361   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  82.4% (201/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  N  Y 
                    Query_5361   181  CAGTTGTCTCTCAACCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCAACTAT  270
V  82.4% (201/244)  IGHV4-59*01  229  .....C..C..G..G....G.TCT.....................GT.....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_5361   271  GTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  94.7% (36/38)    IGHJ3*01     13   --------------------------------------...................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_45322

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           350     9e-99
IGHD3-3*01                                                                                            39.1    3e-07
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTACC	GTACAAAAAGAATCGGATG	ATTACGATTTTTGGAGTGGT	AAAGAGCCCCAAACCG	ACTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCGTACAAAAAGAATCGGATGATTACGATTTTTGGAGTGGTAAAGAGCCCCAAACCGACTCGTTCGACCCC	RTKRIG*LRFLEW*RAPNRLVRP	250	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	249	115	111	3	1	96.5
CDR3-IMGT (germline)	250	252	3	3	0	0	100
Total	N/A	N/A	252	240	11	1	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  L  T  F  S  K  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5362   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTGACCTTCAGTAAAGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (240/252)  IGHV3-15*01  47   .......T............G.............C..T........C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  T  K  N  D  V  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_5362   91   AGTGGGTTGGCCGTATTAAAACCAAAAATGATGTTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  95.2% (240/252)  IGHV3-15*01  137  .....................G.....C.....G........................................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT-----------------------------------------------------><--------------------
                                      D  S  K  K  H  T  V  S  A  N  E  *  P  E  N  R  G  H  S  S  V  L  L  Y  R  T  K  R  I  G  
                    Query_5362   181  ATTCAAAAAAACACACTGTATCTGCAAATGAATAGCCTGAAAACCGAGGACACAGCAGTGTATTACTGTACCGTACAAAAAGAATCGGAT  270
V  95.2% (240/252)  IGHV3-15*01  227  ....-.........G.................C.......................C...............------------------  297
                                      D  S   K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                   

                                      -----------CDR3-IMGT------------------------------>                                  
                                      *  L  R  F  L  E  W  *  R  A  P  N  R  L  V  R  P  L  G  P  G  N  P  G  H  R  L  L   
                    Query_5362   271  GATTACGATTTTTGGAGTGGTAAAGAGCCCCAAACCGACTCGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  355
D  100.0% (20/20)   IGHD3-3*01   3    -....................----------------------------------------------------------------  22
J  95.8% (46/48)    IGHJ5*02     4    -------------------------------------...G................................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_45323

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           396     2e-112
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATGATC	GTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATCGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDRGSYLYYFYGMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	70	4	0	94.6
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	105	9	0	92.1
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	295	274	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_5363   4    AGGTTCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCA  93
V  92.9% (274/295)  IGHV5-51*01  2    ....G...................C........A...................................G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  I  M  Y  P  D  D  S  D  I  R  Y  
                    Query_5363   94   GTTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATCGGCATCATGTATCCTGATGACTCTGATATAAGATACA  183
V  92.9% (274/295)  IGHV5-51*01  92   .C..........G.......................................G..G.....C.......G...........CC.......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  G  T  A  Y  L  Q  W  G  S  L  K  A  P  D  
                    Query_5363   184  GCCCGTCTTTCGAGGGCCAGGTCACCATCTCAGCCGACAAGTCCATCGGCACCGCCTACCTGCAGTGGGGGAGCCTGAAGGCCCCGGACA  273
V  92.9% (274/295)  IGHV5-51*01  182  .......C...C.A.................................A....................A.C............T......  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  F  C  A  R  H  G  D  D  R  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  P  G  T  
                    Query_5363   274  CCGCCATATATTTCTGTGCGAGACATGGGGATGATCGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCCGGGGACCA  363
V  92.9% (274/295)  IGHV5-51*01  272  .......G....A............-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  90.9% (10/11)    IGHD1-26*01  7    ------------------------------------.......C...-------------------------------------------  17
J  93.0% (53/57)    IGHJ6*02     6    --------------------------------------------------.......A.......................AA.......  45

                                                       
                                      T  V  T  F  S  S 
                    Query_5363   364  CGGTCACCTTCTCCTCA  380
J  93.0% (53/57)    IGHJ6*02     46   ........G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_45329

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            347     7e-98
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTCAGATGGCGATTTTG	GCACTGGCTGGTAC	GGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACTCAGATGGCGATTTTGGCACTGGCTGGTACGGGGGTTTTGACGAC	AKDSDGDFGTGWYGGFDD	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  E  H  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5364   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCGAAGAGCATGCCATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGCCTGG  90
V  94.4% (236/250)  IGHV3-9*01   47   ........................................T..T..TT...................G......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  T  I  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5364   91   AGTGGGTCTCAGGTATTAGTTGGAATAGCGGAACCATAAAGTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-9*01   137  ............................T..T.G....GGC.................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  K  D  S  D  G  D  F  G  
                    Query_5364   181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGAGACCTGAGGACACGGCCTTATATTACTGTGCAAAAGACTCAGATGGCGATTTTGGCA  270
V  94.4% (236/250)  IGHV3-9*01   227  ..........G........................G................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD6-19*01  8    ---------------------------------------------------------------------------------------...  10

                                      IMGT--------------------->                                  
                                      T  G  W  Y  G  G  F  D  D  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_5364   271  CTGGCTGGTACGGGGGTTTTGACGACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  330
D  92.9% (13/14)    IGHD6-19*01  11   G..........-------------------------------------------------  21
J  95.3% (41/43)    IGHJ4*02     6    -----------------......T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_64369

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           424     8e-121
IGHD2-21*01                                                                                           14.1    9.2   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGCATACA	ATTGTGG	ACCGGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCATACAATTGTGGACCGGGGACTAC	ARGGIQLWTGDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	280	9	0	96.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_5365   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTAT  91
V  96.9% (280/289)  IGHV1-18*01  7    ............................A.............................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  L  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  V  S  T  Y  I  G  N  T  N  Y  A  Q 
                    Query_5365   92   GGTCTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGGTCAGCACTTACATTGGTAACACAAACTATGCACAG  181
V  96.9% (280/289)  IGHV1-18*01  97   ...A..................................................A.....G......A......................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  L  E  L  K  S  L  R  S  D  D  T  A 
                    Query_5365   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACTTGGAGCTGAAGAGCCTGAGATCTGACGACACGGCC  271
V  96.9% (280/289)  IGHV1-18*01  187  ...C..................................................A.........G.........................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  G  G  I  Q  L  W  T  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5365   272  GTCTATTACTGTGCGAGAGGGGGCATACAATTGTGGACCGGGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.9% (280/289)  IGHV1-18*01  277  ..G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (7/7)     IGHD2-21*01  6    -----------------------------.......----------------------------------------------  12
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_64368

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ2*01                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	TACTATAATCCTAGTGGTTATTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACTATAATCCTAGTGGTTATTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGYYGYWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_5366   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ............................................................A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  N  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  I  S  K  N 
                    Query_5366   91   TGGAATGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCACTCAAGAGTCGAGTCACCATATCAGTAGATATCTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ....T...G......................................C.............................C.CG.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  Y  Y 
                    Query_5366   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACTACTATAATCCTAGTGGTTATTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...................G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (21/24)    IGHD3-22*01  5    ------------------------------------------------------------------......G..AG.............  28

                                      -------------------->                                  
                                       G  Y  W  Y  F  D  L  W  G  R  G  P  L  V  T  V  S  S  
                    Query_5366   271  GGGTACTGGTACTTCGATCTCTGGGGCCGTGGCCCCCTGGTCACTGTCTCCTCAG  325
J  98.1% (51/52)    IGHJ2*01     2    ---..............................A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_290758

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHD5-12*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGCGGGA	TGGCTAC	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGACAGGTGCGGGATGGCTACCTGACTAC	VTGAGWLPDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	5	2	0	71.4
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  G  Y  Y  L  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5367   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTGGTTATTATTTGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*01  49   ......................................C...A....C..C.G..G.................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  L  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_5367   91   TGGCTTGGTTTGATCTCTTACAGCGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAACAAC  180
V  92.2% (225/244)  IGHV4-59*01  139  ...A....G.AT....A......T.....C........................................................G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  V  T  G  A  G  W  L  P  D  Y  W 
                    Query_5367   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCCTGTATTATTGTGTGACAGGTGCGGGATGGCTACCTGACTACTGG  270
V  92.2% (225/244)  IGHV4-59*01  229  .............................................G.......C....C..G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-12*01  11   ------------------------------------------------------------------------.......-----------  17
J  100.0% (41/41)   IGHJ4*02     8    --------------------------------------------------------------------------------..........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_5367   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (41/41)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_64361

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           344     6e-97
IGHD3-10*01                                                                                           19.9    0.15 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAG	ATGGTTGGGGGAG	G	GAATA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGATGGTTGGGGGAGGGAATACTTCCAACAA	ARLDGWGREYFQQ	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  T  Y  G  M  H  W  F  R  Q  A  P  G  K  G  L  
                    Query_5368   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCGGGATTCACCTTAAGTACCTATGGCATGCACTGGTTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (234/248)  IGHV3-30*03  47   ............................T...........C....G................G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  E  S  T  K  K  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  T  S  
                    Query_5368   91   AGTGGGTGGCAGTTATATCATATGATGAAAGTACTAAAAAATATGCAGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAGACACTTCCA  180
V  94.4% (234/248)  IGHV3-30*03  137  ...........................G.....A....T.C............................C..............A.....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  R  L  D  G  W  G  R  E  
                    Query_5368   181  AGAACACGCTGTATCTGCAGATGAACGGCCTGAGAGCTGAAGACACGGCTGTCTATTACTGTGCGAGACTAGATGGTTGGGGGAGGGAAT  270
V  94.4% (234/248)  IGHV3-30*03  227  ...................A......A.............G...........G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD3-10*01  9    ------------------------------------------------------------------------......C......-----  21
J  95.9% (47/49)    IGHJ1*01     4    --------------------------------------------------------------------------------------....  7

                                      ---------->                                  
                                      Y  F  Q  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5368   271  ACTTCCAACAATGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  315
J  95.9% (47/49)    IGHJ1*01     8    .......G..C..................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_64360

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           335     4e-94
IGHD3-10*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGGTTCGAGCAGTTATT	CCTTCGCGCG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTTCGAGCAGTTATTCCTTCGCGCGCTACGGTATGGACGTC	ARDGSSSYSFARYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  S  F  S  T  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5369   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCTCTTTCAGTACTTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-48*03  47   ....................G..............A.C.......G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  G  G  G  R  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5369   91   AGTGGGTTTCATACATTAGTGGCGGTGGACGTACCATTTACTACGCAGACTCTGTGAAGGGCCGATTCACCATATCCAGAGACAACGCCA  180
V  92.8% (232/250)  IGHV3-48*03  137  ....................A.TA....TA.......A...................................C................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  T  A  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  S  S  Y  S  
                    Query_5369   181  AGACCGCTCTGCATCTACAAATGAACAGCCTGAGAGCCGAAGACACGGCTGTTTATTACTGTGCGAGAGATGGTTCGAGCAGTTATTCCT  270
V  92.8% (232/250)  IGHV3-48*03  227  ...A.T.A...T....G.......................G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.2% (15/17)    IGHD3-10*01  10   ----------------------------------------------------------------------.......G.G.......---  26

                                      GT-------------------->                                 
                                      F  A  R  Y  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_5369   271  TCGCGCGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  326
J  98.0% (48/49)    IGHJ6*02     14   -------......................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_64363

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           400     9e-114
IGHD3-10*01                                                                                           12.2    37    
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCTGCGCCTCACGC	CGGGGA	CAAAACCACAGACGACGACAAAG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCTGCGCCTCACGCCGGGGACAAAACCACAGACGACGACAAAGCTTTGACTAC	AGCASRRGQNHRRRQSFDY	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	271	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  T  S  G  D  T  L  S  R  Y
                    Query_5370   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAAACTTCTGGAGACACCCTCAGTAGATA  90
V  94.8% (271/286)  IGHV1-69*01  6    ..................G............................................GG.........G....T....C..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  L  V  G  P  A  H  Y  A  Q
                    Query_5370   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTCTCGTTGGTCCAGCACACTACGCACA  180
V  94.8% (271/286)  IGHV1-69*01  96   ................................................................A..T.....A.....A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_5370   181  GAACTTTCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAACTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  94.8% (271/286)  IGHV1-69*01  186  ...G..C.....................................................G.............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        V  Y  Y  C  A  G  C  A  S  R  R  G  Q  N  H  R  R  R  Q  S  F  D  Y  W  G  Q  G  T  L  V
                    Query_5370   271  CGTCTATTACTGTGCGGGCTGCGCCTCACGCCGGGGACAAAACCACAGACGACGACAAAGCTTTGACTACTGGGGCCAGGGAACCCTGGT  360
V  94.8% (271/286)  IGHV1-69*01  276  ...G............--------------------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                           
D  100.0% (6/6)     IGHD3-10*01  15   -------------------------------......-----------------------------------------------------  20
J  100.0% (44/44)   IGHJ4*02     5    ------------------------------------------------------------..............................  34

                                                    
                                        T  V  S  S  
                    Query_5370   361  CACCGTCTCCTCAG  374
J  100.0% (44/44)   IGHJ4*02     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_290757

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           355     4e-100
IGHD2-15*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGGGCTGCATCATGTACCGGTAA	TAGCTGCTAC	GATTTAGG	CGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGGGCTGCATCATGTACCGGTAATAGCTGCTACGATTTAGGCGGAATGGACGTC	REGLHHVPVIAATI*AEWTS	283	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	69	70	64	5	1	91.4
CDR1-IMGT	70	93	24	20	4	0	83.3
FR2-IMGT	94	144	51	47	4	0	92.2
CDR2-IMGT	145	168	24	21	3	0	87.5
FR3-IMGT	169	282	114	102	12	0	89.5
CDR3-IMGT (germline)	283	288	6	6	0	0	100
Total	N/A	N/A	289	260	28	1	90


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  H   L  E  Q  S  *  E  S  R  G  S  L  *  R  S  P  V  W  G  L  D  T  A  L  P  N  
                    Query_5371   1    GCAGCTGGTGCA-TCTGGAGCAGAGCTGAGAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCTGGGGTCTGGATACAGCTTTGCCAAATA  89
V  90.0% (260/289)  IGHV5-51*03  6    ............G............G...A...............................AA...T...............A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                      I  G  L  P  G  C  A  R  C  P  G  K  A  W  S  G  W  G  P  S  I  P  L  T  L  I  P  D  T  A  
                    Query_5371   90   TTGGATTGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGCTGGGGACCATCTATCCCTCTGACTCTGATACCCGATACAGCCC  179
V  90.0% (260/289)  IGHV5-51*03  96   C.....C.G.....................................A......T.........TGG.............A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                      R  P  S  R  A  R  S  P  S  Q  S  T  S  L  S  P  P  P  T  C  S  G  A  A  *  G  S  R  T  P  
                    Query_5371   180  GTCCTTCCAGGGCCAGGTCACCATCTCAGTCGACAAGTCTCTCTCCACCGCCTACCTGCAGTGGAGCAGCCTGAGGGTCTCGGACCCCGC  269
V  90.0% (260/289)  IGHV5-51*03  186  .........A...................C.........CA..AG.............................A..C.......A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                      P  L  I  T  V  R  E  G  L  H  H  V  P  V  I  A  A  T  I  *  A  E  W  T  S  G  A  K  G  P  
                    Query_5371   270  CACTTATTACTGTGCGAGAAGGGCTGCATCATGTACCGGTAATAGCTGCTACGATTTAGGCGGAATGGACGTCTGGGGCCAAGGGACCAC  359
V  90.0% (260/289)  IGHV5-51*03  276  ..TG...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD2-15*01  19   ------------------------------------------..........--------------------------------------  28
J  97.8% (45/46)    IGHJ6*02     17   ------------------------------------------------------------...T..........................  46

                                                      
                                      R  S  P  S  P   
                    Query_5371   360  GGTCACCGTCTCCTCA  375
J  97.8% (45/46)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_64365

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           286     1e-79
IGHD3-9*01                                                                                            16.1    2.2  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCGA	TATTACGGTAT	GACTCCTATA	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCGATATTACGGTATGACTCCTATAACGGTATGGACGTC	ARDSILRYDSYNGMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	96	18	0	84.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	214	31	0	87.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  S  S  M  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5372   1    ACCCTGTCCCTCACCTGCTCGGTCTCTGGTAGCTCCATGACTAGTTACTACTGGAGTTGGATCCGGCAGCCCCCCGGAAAGGGACTGGAG  90
V  87.3% (214/245)  IGHV4-59*01  49   ..................A.T.........G.......C.G...............C.................A..G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  I  S  K  Y  N  P  S  L  K  S  R  A  T  V  S  M  D  T  S  K  N 
                    Query_5372   91   TGGATTGGCTATATCTATTACACTGGGATAAGCAAGTACAATCCCTCCCTCAAGAGTCGAGCCACCGTATCGATGGACACCTCCAAGAAT  180
V  87.3% (214/245)  IGHV4-59*01  139  ........G.............G.....GC.C...C.....C...................T....A....AG.A.....G........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  F  L  N  V  N  S  V  T  S  A  D  T  A  V  Y  F  C  A  R  D  S  I  L  R  Y  D  S  Y 
                    Query_5372   181  CAATTCTTCCTGAACGTCAACTCTGTGACCTCTGCGGACACGGCCGTATATTTCTGTGCGAGAGATTCGATATTACGGTATGACTCCTAT  270
V  87.3% (214/245)  IGHV4-59*01  229  ..G....C......GC.G.G..........G................G....A............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.9% (10/11)    IGHD3-9*01   2    ----------------------------------------------------------------------.......A...---------  12

                                      -------------->                                 
                                       N  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_5372   271  AACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  318
J  97.9% (46/47)    IGHJ6*02     16   -....................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_64367

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           397     8e-113
IGHD3-16*01                                                                                           27.6    9e-04 
IGHJ4*01                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCGGTGCCCCTGCTTTGGAG	TATGATAATGTTTGGGGGAG	AGTTCAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCGGTGCCCCTGCTTTGGAGTATGATAATGTTTGGGGGAGAGTTCAGTAC	ARLGAPALEYDNVWGRVQY	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	100	14	0	87.7
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	294	274	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_5373   3    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  92
V  93.2% (274/294)  IGHV5-51*01  2    ....G........................G............................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  L  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_5373   93   ACTACTGGATCGGCTGGGTGCGCCAACTGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACAAGATACA  182
V  93.2% (274/294)  IGHV5-51*01  92   G........................GA.......................................................C.......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  Q  S  F  Q  G  Q  V  T  I  S  A  D  S  S  I  R  T  T  F  L  Q  W  N  S  L  P  S  S  D  
                    Query_5373   183  GACAGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGCTCCATCAGAACCACCTTCCTGCAGTGGAATAGTCTGCCGTCCTCGGACA  272
V  93.2% (274/294)  IGHV5-51*01  182  .C.C...................................AG........C...G...A...........GC..C...AA.G.........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  M  Y  Y  C  A  R  L  G  A  P  A  L  E  Y  D  N  V  W  G  R  V  Q  Y  W  G  Q  G  T  
                    Query_5373   273  CCGCCATGTATTATTGTGCGAGACTCGGTGCCCCTGCTTTGGAGTATGATAATGTTTGGGGGAGAGTTCAGTACTGGGGCCAAGGAACCC  362
V  93.2% (274/294)  IGHV5-51*01  272  .............C..........------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  90.0% (18/20)    IGHD3-16*01  5    --------------------------------------------......T.C...........--------------------------  24
J  94.6% (35/37)    IGHJ4*01     12   -----------------------------------------------------------------------...................  30

                                                        
                                      L  V  A  V  S  P  
                    Query_5373   363  TGGTCGCCGTCTCCCCAG  380
J  94.6% (35/37)    IGHJ4*01     31   .....A........T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_64366

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           346     2e-97
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATGG	GGTTCGAGGA	CACTCGACCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTTCGAGGACACTCGACCGTTTTTGATATC	ARDGVRGHSTVFDI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  N  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5374   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTAACTCTTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (232/243)  IGHV4-59*08  49   ........................................G....T...AC.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_5374   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTATAATCCCTCCCTTAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  95.5% (232/243)  IGHV4-59*08  139  ......................................C..C........C.....................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  V  R  G  H  S  T  V 
                    Query_5374   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGATGGGGTTCGAGGACACTCGACCGTT  270
V  95.5% (232/243)  IGHV4-59*08  229  ....................C........C.......................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD3-10*01  11   --------------------------------------------------------------------......G...------------  20
J  93.2% (41/44)    IGHJ3*02     7    -----------------------------------------------------------------------------------------.  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  T  I  I  V  S  S  
                    Query_5374   271  TTTGATATCTGGGGCCAAGGGACAACGATCATCGTCTCTTCAG  313
J  93.2% (41/44)    IGHJ3*02     8    .........................T.G...C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_225725

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           380     1e-107
IGHD6-6*01                                                                                            14.1    9.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTC	ATTREQLVPIFDF	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	68	6	0	91.9
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	106	8	0	93
CDR3-IMGT (germline)	292	295	4	4	0	0	100
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  S  E  L  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  R  L  S  
                    Query_5375   5    AGGTCCAGCTTGTGCAGTCTGGATCAGAACTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGTTCTGGATACAGATTAAGCA  94
V  91.8% (267/291)  IGHV5-51*03  2    ....G.....G............G....GG........................A...........................C..T.C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  E  T  K  Y  
                    Query_5375   95   GTTATTGGATCGCCTGGGTGCGCCAGATGCCGGGGAAAGGCCTGGAGTGGATGGGAATCGTCTATCCTGGTGACTCTGAGACCAAATACA  184
V  91.8% (267/291)  IGHV5-51*03  92   .C..C.......G..................C.......................G...A...................T....G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  A  S  G  T  A  F  L  Q  W  D  S  L  K  A  S  D  
                    Query_5375   185  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGGCCAGCGGCACCGCCTTCCTGCAGTGGGACAGCCTGAAGGCCTCGGACA  274
V  91.8% (267/291)  IGHV5-51*03  182  ...........C.............................T...T.A.........A..........AG....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  A  M  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_5375   275  CCGCCATGTATTACTGTGCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  364
V  91.8% (267/291)  IGHV5-51*03  272  .....................---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -----------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------.......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_225727

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           427     1e-121
IGHD3-3*01                                                                                            33.4    2e-05 
IGHJ5*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTACCCGACGAGGCGG	TTTTTGGAGTGGTTATT	CCCC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTACCCGACGAGGCGGTTTTTGGAGTGGTTATTCCCCCAACTGGTTCGACCCC	ARVTRRGGFWSGYSPNWFDP	289	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	112	2	0	98.2
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	284	11	0	96.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  T  F  T 
                    Query_5376   1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTCAAGGTCTCCTGCAAGACTTCTGGTTACACCTTTACC  90
V  96.3% (284/295)  IGHV1-18*01  1    ...G.T...............................................G...............G....................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  G  Y  N  G  N  T  N  Y 
                    Query_5376   91   AGTTATGGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGTTGGGATGGATCAGCGGTTACAATGGTAATACAAACTAT  180
V  96.3% (284/295)  IGHV1-18*01  91   ..C..........G.....................................A...............C............C.........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  R  V  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_5376   181  GCACAGAGGGTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  270
V  96.3% (284/295)  IGHV1-18*01  181  .......A.C................................................................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  V  Y  Y  C  A  R  V  T  R  R  G  G  F  W  S  G  Y  S  P  N  W  F  D  P  W  G  Q  G 
                    Query_5376   271  ACGGCCGTGTATTACTGTGCGAGAGTTACCCGACGAGGCGGTTTTTGGAGTGGTTATTCCCCCAACTGGTTCGACCCCTGGGGCCAGGGA  360
V  96.3% (284/295)  IGHV1-18*01  271  .........................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (17/17)   IGHD3-3*01   10   -----------------------------------------.................--------------------------------  26
J  98.0% (49/50)    IGHJ5*02     2    --------------------------------------------------------------............................  29

                                                            
                                       T  L  V  T  V  S  S  
                    Query_5376   361  ACCCTGGTCACCGTCTCTTCAG  382
J  98.0% (49/50)    IGHJ5*02     30   .................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_225726

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD2-15*01                                                                                           14.1    8.6  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	ACCCGTTTTGTCT	TGGCGGTAGATGC	ATCTCGGGCTTGAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACCCGTTTTGTCTTGGCGGTAGATGCATCTCGGGCTTGAGTGACTTC	ARDPFCLGGRCISGLSDF	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	29	18	16	2	0	88.9
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	235	218	17	0	92.8


Alignments

                                      <----FR1-IMGT----><-------CDR1-IMGT------><--------------------FR2-IMGT-------------------
                                       L  S  C  A  V  S  G  G  P  F  S  G  H  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E  W  I  G 
                    Query_5377   12   CTCTCCTGCGCTGTCTCTGGTGGGCCCTTCAGTGGTCACTACTGGAACTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAGTGGATTGGG  101
V  92.8% (218/235)  IGHV4-34*01  58   ...A............A.......T...........T.........G.............C.............................  147
                                       L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G 

                                      --><-----CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-----
                                       E  I  N  R  G  G  S  T  T  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N  Q  F  S 
                    Query_5377   102  GAAATCAATCGTGGTGGAAGCACCACCTACAACCCGTCCCTCAAGAGCCGAGTCACCATGTCTGTAGACACGTCCAAGAACCAATTCTCC  191
V  92.8% (218/235)  IGHV4-34*01  148  ..........A.A............A.....................T...........A..A....................G......  237
                                       E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S 

                                      -----------------------------------------------><----------------------CDR3-IMGT----------
                                       L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  F  C  L  G  G  R  C  I  S  G 
                    Query_5377   192  CTGAAACTGACCTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGCGAGACCCGTTTTGTCTTGGCGGTAGATGCATCTCGGGC  281
V  92.8% (218/235)  IGHV4-34*01  238  .....G....G...........................G............A...-----------------------------------  292
                                       L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                                     
D  84.6% (11/13)    IGHD2-15*01  13   --------------------------------------------------------------------...T.....C...---------  25

                                      ----------->                                  
                                       L  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5377   282  TTGAGTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  97.6% (40/41)    IGHJ4*02     8    -----.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_225721

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            315     5e-88
IGHD2-15*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCATTGTGGA	AGTGGTGG	CTGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCATTGTGGAAGTGGTGGCTGTTTCTACTTTGACATC	ARVHCGSGGCFYFDI	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	46	5	0	90.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	224	23	0	90.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  S  D  S  I  S  G  S  D  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_5378   1    ACCCTGTCCCTCACCTGCGCTGTCTCTAGTGACTCCATCAGCGGTTCTGACTGGTGGACTTGGATCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.7% (224/247)  IGHV4-4*02   49   ...........................G...G..........A..AG.A.........G....G..........................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  S  A  D  T  H  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  N  S  K 
                    Query_5378   91   GAGTGGATCGGAGAGATCCATCATAGTGCGGACACCCACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAACTCTAAG  180
V  90.7% (224/247)  IGHV4-4*02   139  ........T..G..A...T.........G.AG....A..............................................G..C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  E  L  R  S  V  T  A  A  D  A  A  L  Y  Y  C  A  R  V  H  C  G  S  G  G  C 
                    Query_5378   181  AACCAATTCTCCCTGGAGCTGAGGTCTGTGACCGCCGCGGACGCGGCCCTGTATTACTGTGCGAGAGTTCATTGTGGAAGTGGTGGCTGT  270
V  90.7% (224/247)  IGHV4-4*02   229  .....G.........A.......C..................A.....G..................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD2-15*01  11   ------------------------------------------------------------------------------........----  18

                                      -------------->                                  
                                       F  Y  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5378   271  TTCTACTTTGACATCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  95.7% (45/47)    IGHJ4*02     2    --..........TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_225720

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           357     1e-100
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTAGA	N/A	N/A	G	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGACTATTCCTTCGCTATAGACGTC	TRDYSFAIDV	249	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	254	6	6	0	0	100
Total	N/A	N/A	254	241	13	0	94.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  D  F  S  A  S  A  M  N  W  V  R  Q  A  S  G  K  G  L  
                    Query_5379   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGGTTCGACTTCAGTGCCTCTGCTATGAACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  94.9% (241/254)  IGHV3-73*01  47   .........A..............C..........AC........G..........C.................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  H  I  R  S  K  A  H  R  Y  A  T  T  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_5379   91   AGTGGGTTGGCCATATTAGAAGCAAAGCTCACCGTTACGCGACTACATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATG  180
V  94.9% (241/254)  IGHV3-73*01  137  ............G................A..A..........AG.............................................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--
                                      E  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  D  Y  S  F  A  
                    Query_5379   181  AATCAAAGAACACGGCGTATCTGCAAATGAACAGCCTGAAGACCGAGGACACGGCCGTGTATTACTGTACTAGAGACTATTCCTTCGCTA  270
V  94.9% (241/254)  IGHV3-73*01  227  .T......................................A.................................----------------  300
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
J  91.1% (51/56)    IGHJ6*02     7    ---------------------------------------------------------------------------....C.A..A..G..  21

                                      ------->                                 
                                      I  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5379   271  TAGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  311
J  91.1% (51/56)    IGHJ6*02     22   .G.......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_94759

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	ATTTCTTAGGG	GCTCGTC	AGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACATTTCTTAGGGGCTCGTCAGGCTTTCACTAC	TFLRGSSGFHY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	101	13	0	88.6
CDR3-IMGT (germline)	249	250	2	2	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  D  L  D  W  V  R  Q  A  S  G  K  G  L  
                    Query_5380   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGATTTGGACTGGGTCCGCCAGGCTTCCGGGAAAGGCCTGG  90
V  90.8% (227/250)  IGHV3-73*01  47   .........A.........................................C.A..C............................G....  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  M  R  T  K  D  D  N  Y  A  T  L  Y  A  A  S  V  R  G  R  F  T  I  S  R  D  
                    Query_5380   91   AGTGGGTTGGCCGTATGAGAACCAAAGATGACAATTACGCGACACTATATGCTGCGTCGGTGAGAGGCAGGTTCACCATCTCCAGAGATG  180
V  90.8% (227/250)  IGHV3-73*01  137  ................T....G.....C.A...G..........GC.................A..........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  N  M  A  Y  L  Q  M  S  G  L  D  T  E  D  T  A  L  Y  F  C  T  F  L  R  G  S  S  
                    Query_5380   181  ATTCAAAGAACATGGCTTATCTGCAAATGAGCGGCCTGGACACCGAGGACACGGCCCTTTACTTCTGTACATTTCTTAGGGGCTCGTCAG  270
V  90.8% (227/250)  IGHV3-73*01  227  ............C...G.............A.A.....A.A...............G.G..T.A......--------------------  296
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------.......--  17

                                      ---------->                                  
                                      G  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5380   271  GCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (43/44)    IGHJ4*02     5    -....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_225722

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           305     3e-85
IGHD6-13*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTGG	GCAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTGGGCAGCAGCTGACTGACTAC	REILGSS*LTT	275	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	29	28	0	1	96.6
CDR1-IMGT	29	52	24	23	1	0	95.8
FR2-IMGT	53	103	51	51	0	0	100
CDR2-IMGT	104	127	24	22	2	0	91.7
FR3-IMGT	128	274	147	111	3	33	75.5
CDR3-IMGT (germline)	275	282	8	8	0	0	100
Total	N/A	N/A	283	243	6	34	85.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L   D  S  P  V  Q  P  L  D  S  P  S  V  V  I  A  *  T  G  S  A  R  L  Q  G  R  G  W 
                    Query_5381   1    GGTCCCTG-GACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  89
V  85.9% (243/283)  IGHV3-21*01  47   ........A.....................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       S  G  S  H  P  L  V  V  V  V  V  T  Y  I  T  Q  T  Q  *  R  A  D  S  P  I  T  Q  T  Q  * 
                    Query_5381   90   AGTGGGTCTCATCCATTAGTGGTAGTAGTAGTCACATATATTACGCAGACTCAGTGAAGGGCCGATTCACCTATTACGCAGACTCAGTGA  179
V  85.9% (243/283)  IGHV3-21*01  137  ....................A...........T.......C...---------------------------------.............  193
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y                                   A  D  S  V  

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                       R  A  D  S  P  S  P  E  T  T  P  R  T  H  C  I  C  K  *  T  A  *  E  P  R  T  R  L  S  I 
                    Query_5381   180  AGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATT  269
V  85.9% (243/283)  IGHV3-21*01  194  ..........................A..........................................................G....  283
                                      K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-----------CDR3-IMGT----------->                                  
                                       T  V  R  E  I  L  G  S  S  *  L  T  T  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_5381   270  ACTGTGCGAGAGATTCTGGGCAGCAGCTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  341
V  85.9% (243/283)  IGHV3-21*01  284  .............-----------------------------------------------------------  296
                                      Y  C  A  R                                                              
D  100.0% (10/10)   IGHD6-13*01  8    -------------------..........-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_40666

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            347     7e-98
IGHD3-3*01                                                                                            12.2    33   
IGHJ4*01                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD3-3*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCAG	CCG	TTACGA	GATCA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGCAGCCGTTACGAGATCAACTTTGAATAT	ARSRYEINFEY	263	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	43	3	0	93.5
CDR1-IMGT	47	76	30	24	6	0	80
FR2-IMGT	77	127	51	49	2	0	96.1
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	104	10	0	91.2
CDR3-IMGT (germline)	263	270	8	7	1	0	87.5
Total	N/A	N/A	270	246	24	0	91.1


Alignments

                                     <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                       L  V  K  P  T  Q  T  L  T  L  T  C  S  L  P  E  F  S  L  N  T  D  G  V  A  V  S  W  I  R
                    Query_5382  1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCAGCCTCCCTGAGTTCTCCCTCAACACTGATGGAGTGGCTGTGAGTTGGATCCG  90
V  91.1% (246/270)  IGHV2-5*01  30   ......................................C.T..T...G......A....G....AG........G....G.C........  119
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                     -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  G  D  Q  R  Y  S  P  S  L  R  S  R  L  T
                    Query_5382  91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGGTGATCAGCGATACAGCCCATCTCTGAGGAGCAGGCTCAC  180
V  91.1% (246/270)  IGHV2-5*01  120  ..................................................A....A....C................A............  209
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                     ---------------------FR3-IMGT----------------------------------------------------><-------
                                       I  S  K  D  T  S  K  N  Q  V  V  L  K  M  T  N  M  E  P  V  D  T  G  T  Y  F  C  A  R  S
                    Query_5382  181  CATCAGTAAGGACACCTCCAAAAACCAGGTGGTCCTGAAGATGACCAACATGGAGCCTGTGGACACAGGCACATATTTCTGTGCACGCAG  270
V  91.1% (246/270)  IGHV2-5*01  210  .....CC.............................T.CA..............C.............C........A........A...  299
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                     ----CDR3-IMGT----------->                              
                                       R  Y  E  I  N  F  E  Y  W  G  R  G  T  L  V  T  V  S 
                    Query_5382  271  CCGTTACGAGATCAACTTTGAATATTGGGGTCGCGGAACCCTGGTCACCGTCTCC  325
D  100.0% (6/6)     IGHD3-3*01  4    ---......----------------------------------------------  9
J  87.8% (36/41)    IGHJ4*01    4    --------------.......C..C.....C.AA.....................  44


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_94756

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           286     1e-79
IGHD6-19*01                                                                                           14.1    8.9  
IGHJ6*02                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGG	CCACCGGGTGAACAA	TGGCTGG	GGAACTTTCTTTAATTTCGGGC	TGGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGGGAGGCCACCGGGTGAACAATGGCTGGGGAACTTTCTTTAATTTCGGGCTGGGCGCC	SGGHRVNNGWGTFFNFGLGA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	219	26	6	87.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_5383   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  87.3% (219/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  N  G  N  I  N  Y  N  Q  S  L  Q  S  R  A  T  I  S  V  D  T  S 
                    Query_5383   91   CTGGAATGGATTGGGGAAATCATTCCTAATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGCCACCATCTCAGTAGACACGTCC  180
V  87.3% (219/251)  IGHV4-34*01  133  .....G................A..A..G.....G..C.........C.C.......A.........T......A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  C  Y  C  S  G  G  H  R  V  N  N  G 
                    Query_5383   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTGTTATTGTTCGGGAGGCCACCGGGTGAACAATGGC  270
V  87.3% (219/251)  IGHV4-34*01  223  ....................GC............C....................A...C...G..A....-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  100.0% (7/7)     IGHD6-19*01  12   --------------------------------------------------------------------------------------....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  F  F  N  F  G  L  G  A  W  G  Q  G  T  P  V  S  V  S  S 
                    Query_5383   271  TGGGGAACTTTCTTTAATTTCGGGCTGGGCGCCTGGGGCCAAGGGACCCCGGTCTCCGTCTCCTCA  336
D  100.0% (7/7)     IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  90.2% (37/41)    IGHJ6*02     22   -------------------------...A..T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_94755

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           335     4e-94
IGHD1-20*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGATTTGGCA	ATAACTGG	GCCCACTCGAGAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGATTTGGCAATAACTGGGCCCACTCGAGAGTACTATGGTTTGGACGTC	ARDDLAITGPTREYYGLDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_5384   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGGCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-11*01  47   ...................................................................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  M  S  S  S  G  S  I  I  K  Y  A  D  S  V  E  G  R  F  V  M  S  R  D  N  A  
                    Query_5384   91   AGTGGGTCTCACACATGAGTAGTAGTGGTAGTATCATAAAGTATGCAGACTCTGTGGAGGGCCGATTCGTCATGTCCAGGGACAACGCCG  180
V  92.8% (232/250)  IGHV3-11*01  137  .......T...T....T................C....T.C..C............A...........AC...C...............A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      E  N  S  L  Y  L  Q  M  T  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  D  L  A  I  T  G  
                    Query_5384   181  AAAACTCACTGTATCTGCAAATGACCAGTCTAAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAGAGACGATTTGGCAATAACTGGGC  270
V  92.8% (232/250)  IGHV3-11*01  227  .G......................A...C..G....................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-20*01  4    --------------------------------------------------------------------------------........--  11

                                      -IMGT----------------------->                                 
                                      P  T  R  E  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5384   271  CCACTCGAGAGTACTATGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  96.1% (49/51)    IGHJ6*02     12   -----------.....C...A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_40665

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD3-16*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_5385   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (227/249)  IGHV4-61*01  49   .......................C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S 
                    Query_5385   91   CTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  91.2% (227/249)  IGHV4-61*01  139  ....A.........GT............G......CAC..A.........................G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y 
                    Query_5385   181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTAT  270
V  91.2% (227/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------------.....  28

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_5385   271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
D  100.0% (7/7)     IGHD3-16*02  29   ..--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_225729

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-72*01                                                                                           377     9e-107
IGHD2-2*01                                                                                            14.1    8.7   
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-72*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAG	TAGTAATGCAACCTCT	TAGTACC	CTCGTTGTTACCTC	TGATA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGAGTAGTAATGCAACCTCTTAGTACCCTCGTTGTTACCTCTGATATC	ARVVMQPLSTLVVTSDI	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	248	7	0	97.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_5386   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACCACTACATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.3% (248/255)  IGHV3-72*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  T  R  N  K  A  N  S  Y  T  T  E  Y  A  A  S  V  K  G  R  F  S  I  S  R  D  
                    Query_5386   91   AGTGGGTTGGTCGTACTAGAAACAAAGCTAACAGTTACACCACCGAATACGCCGCGTCTGTGAAAGGCAGATTCAGCATCTCAAGAGATG  180
V  97.3% (248/255)  IGHV3-72*01  137  ..........C................................A...............................C..............  226
                                      E  W  V  G  R  T  R  N  K  A  N  S  Y  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  M  N  L  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  M  Y  Y  C  A  R  V  V  M  Q  P  
                    Query_5386   181  ATTCAATGAACCTACTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCATGTATTACTGTGCTAGAGTAGTAATGCAACCTC  270
V  97.3% (248/255)  IGHV3-72*01  227  ......A....TC...........................................G..................---------------  301
                                      D  S  K  N  S  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R                 

                                      DR3-IMGT-------------------->                                  
                                      L  S  T  L  V  V  T  S  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5386   271  TTAGTACCCTCGTTGTTACCTCTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  333
D  100.0% (7/7)     IGHD2-2*01   13   -.......-------------------------------------------------------  19
J  100.0% (41/41)   IGHJ3*02     10   ----------------------.........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_40663

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           349     2e-98
IGHD5-12*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCTGCTATCGGATACTTT	GTGGCTACGATT	CGGGTGAGGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTGCTATCGGATACTTTGTGGCTACGATTCGGGTGAGGGCATGGACGTC	ARLCYRILCGYDSGEGMDV	246	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	112	2	0	98.2
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  S  G  A  S  I  R  S  T  N  F  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_5387   4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTGCCTCCATCAGGAGTACTAATTTCTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  94.8% (236/249)  IGHV4-39*01  50   .....TCC...A....CA............G.........C....G..G..A......................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_5387   94   TGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCA  183
V  94.8% (236/249)  IGHV4-39*01  140  ..........................................................................................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  D  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  C  Y  R  I  L  C  
                    Query_5387   184  AGGACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACTCTGCTATCGGATACTTTGTG  273
V  94.8% (236/249)  IGHV4-39*01  230  ..A.....................G............................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD5-12*01  10   ---------------------------------------------------------------------------------------...  12

                                      -IMGT----------------------->                                 
                                      G  Y  D  S  G  E  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5387   274  GCTACGATTCGGGTGAGGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  100.0% (12/12)   IGHD5-12*01  13   .........-----------------------------------------------------  21
J  100.0% (42/42)   IGHJ6*02     21   --------------------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_40660

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           25.7    0.003
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGC	AGTAGTGGTTATT	GG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTCGACCCC	ARGGSSGYWWFDP	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_5388   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCATCAGTGGTTATTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.8% (228/243)  IGHV4-59*01  50   .....TCC...A....C.............G..........A....C.......G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  F  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  K  N  
                    Query_5388   94   GGATTGGGTTTATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGGGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  93.8% (228/243)  IGHV4-59*01  140  .........A.........C.................................A....................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  S  S  G  Y  W  W  F  
                    Query_5388   184  AGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTCG  273
V  93.8% (228/243)  IGHV4-59*01  230  ..............C...G.................................C..........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (13/13)   IGHD3-22*01  14   --------------------------------------------------------------------.............---------  26
J  93.5% (43/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  A  I  P  V  T  V  S  S  
                    Query_5388   274  ACCCCTGGGGCCAGGCAATCCCGGTCACCGTCTCCTCAG  312
J  93.5% (43/46)    IGHJ5*02     13   ...............G..C..T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_94750

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           406     1e-115
IGHD1-26*01                                                                                           12.2    37    
IGHJ3*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ATAGCGGAAACTACT	TATGTTAGAGACTC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGATAGCGGAAACTACTTATGTTAGAGACTCTGATGCTTTTGATATC	ARDRIAETTYVRDSDAFDI	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  N  N  Y 
                    Query_5389   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTCAATAACTAT  91
V  94.8% (275/290)  IGHV1-18*01  7    .................................................................T..............T.CC.G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  I  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_5389   92   GGTTTCATCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAG  181
V  94.8% (275/290)  IGHV1-18*01  97   ...A...G..................................................................................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  K  G  R  F  T  M  T  T  D  T  S  T  S  T  A  S  V  E  L  R  S  L  R  S  D  D  T  A 
                    Query_5389   182  AAATTCAAGGGCAGATTCACCATGACCACGGACACATCCACGAGCACAGCCTCCGTGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (275/290)  IGHV1-18*01  187  ..GC..C........G.............A......................A.A...................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  A  R  D  R  I  A  E  T  T  Y  V  R  D  S  D  A  F  D  I  W  G  Q  G  T  M  V 
                    Query_5389   272  GTGTATTACTGCGCGAGAGATCGGATAGCGGAAACTACTTATGTTAGAGACTCTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTC  361
V  94.8% (275/290)  IGHV1-18*01  277  ...........T........----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  80.0% (12/15)    IGHD1-26*01  4    ------------------------....T..G.G.....---------------------------------------------------  18
J  100.0% (50/50)   IGHJ3*02     1    -----------------------------------------------------.....................................  37

                                                   
                                       T  V  S  S  
                    Query_5389   362  ACCGTCTCTTCAG  374
J  100.0% (50/50)   IGHJ3*02     38   .............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_253246

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         347     7e-98
IGHD5-12*01                                                                                           21.8    0.043
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACAAGTCGTCC	GATATGGTGGCTAC	CTCTTGGAGGGTGGAAC	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACAAGTCGTCCGATATGGTGGCTACCTCTTGGAGGGTGGAACCTTCGACTAC	AREQVVRYGGYLLEGGTFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  L  S  T  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5390     1    GGTCCCTGAGACTCTCCTGTGCAGCTTCTGGATTCACCTTGAGCACCTATTCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-30-3*01  47   .........................C..............C..T.G....G.......................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  L  I  S  S  D  G  S  T  E  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5390     91   AGTGGGTGGCACTTATATCATCTGATGGAAGCACTGAATTCTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (236/250)  IGHV3-30-3*01  137  ...........G.........A...........A.A...A..................................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------------CD
                                        K  N  T  L  F  L  Q  M  N  S  L  R  G  G  D  T  A  V  Y  Y  C  A  R  E  Q  V  V  R  Y  G  
                    Query_5390     181  AGAACACGCTGTTTCTGCAAATGAACAGCCTGAGAGGTGGGGACACGGCTGTCTATTACTGTGCGAGAGAACAAGTCGTCCGATATGGTG  270
V  94.4% (236/250)  IGHV3-30-3*01  227  ............A.......................C..A............G.................--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.9% (13/14)    IGHD5-12*01    4    ---------------------------------------------------------------------------------.....A...  12

                                        R3-IMGT------------------------>                                  
                                        G  Y  L  L  E  G  G  T  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_5390     271  GCTACCTCTTGGAGGGTGGAACCTTCGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  336
D  92.9% (13/14)    IGHD5-12*01    13   .....-------------------------------------------------------------  17
J  95.5% (42/44)    IGHJ4*02       5    ----------------------...T...................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_137107

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           352     3e-99
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TGGAGACC	TTCGGGGAGTTATTAT	TTG	GGGGC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5391   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTTAGTAGATATTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-74*01  47   .....................................C..C.....C..C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  G  D  G  S  G  T  S  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5391   91   TGTGGGTCTCCCGTATTAACGGTGATGGGAGTGGCACAAGCTCCGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (237/249)  IGHV3-74*01  137  ..........A........TA...........A.........A...............................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT---------------------------------------------------->                            
                                      K  K  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  V  E  T  F  G  E  L  
                    Query_5391   181  AGAAAACACTGTATCTGCAAATGAACAGTCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCAAGAGTGGAGACCTTCGGGGAGTTAT  270
V  95.2% (237/249)  IGHV3-74*01  227  ....C..G............................C................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (16/16)   IGHD3-10*01  13   -----------------------------------------------------------------------------.............  25

                                                                             
                                      L  F  G  G  Q  G  T  L  V  T  V  S  S  
                    Query_5391   271  TATTTGGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
D  100.0% (16/16)   IGHD3-10*01  26   ...------------------------------------  28
J  100.0% (33/33)   IGHJ4*02     16   ------.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_185989

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           347     7e-98
IGHD3-16*01                                                                                           10.3    119  
IGHJ2*01                                                                                              102     4e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TGGGG	TGCCCACTTCAA	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGGGTGCCCACTTCAACTACTGGTACTTCGATCTC	ARWGAHFNYWYFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  A  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5392   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGCATTCACCCTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGG  90
V  94.8% (235/248)  IGHV3-30*03  47   ..............................G.......T..............................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  P  Y  D  G  N  N  R  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5392   91   AGTGGGTGGCGGTTATACCATATGATGGAAATAATAGATACTATGCCGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (235/248)  IGHV3-30*03  137  ..........A......T............G.....A.........A...........................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  L  Q  M  N  S  L  R  V  E  D  T  A  I  Y  Y  C  A  R  W  G  A  H  F  N  Y  
                    Query_5392   181  AGAACACGCTGTCTCTGCAAATGAACAGCCTGAGAGTTGAGGACACGGCCATCTATTACTGTGCGAGATGGGGTGCCCACTTCAACTACT  270
V  94.8% (235/248)  IGHV3-30*03  227  ............A.......................C............TG.G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-16*01  17   --------------------------------------------------------------------.....-----------------  21
J  100.0% (53/53)   IGHJ2*01     1    -------------------------------------------------------------------------------------.....  5

                                      ------------->                                  
                                      W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_5392   271  GGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  318
J  100.0% (53/53)   IGHJ2*01     6    ................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_30968

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           341     6e-96
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGGG	AGCAATGGCTGG	GGAAGGTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTATGGACGCC	ARGHRGSNGWGRYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	18	3	0	85.7
FR3-IMGT	153	266	114	109	5	0	95.6
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	248	20	6	90.5


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  S  D  S  G  Y  Y  W  N  W  
                    Query_5393   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCAGTGACAGTGGTTATTACTGGAACTGGT  90
V  90.5% (248/274)  IGHV4-34*01  26   ........T.......T............T................C..T................------....C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  H  R  G  G  T  N  Y  N  P  S  L  Q  S  R  
                    Query_5393   91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCATCGTGGAGGCACCAACTACAACCCGTCCCTCCAGAGTCGAG  180
V  90.5% (248/274)  IGHV4-34*01  110  T.........C...........G.....G................A....A.....A.......................A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_5393   181  TCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  90.5% (248/274)  IGHV4-34*01  200  ...........................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  G  S  N  G  W  G  R  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_5393   271  GAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  90.5% (248/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  93.8% (45/48)    IGHJ6*02     15   -----------------------------------------.............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_30969

Length=317
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           372     2e-105
IGHD7-27*01                                                                                           12.2    29    
IGHJ1*01                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD7-27*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CC	CTGGGG	N/A	GCACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCTGGGGGCAC	ARPWGH	243	260	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	243	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_5394   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (243/248)  IGHV3-11*01  47   .................................................C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  S  G  S  T  K  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5394   91   AGTGGGTTTCATACATTAGTACTAGTGGTAGTACCAAACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  98.0% (243/248)  IGHV3-11*01  137  .....................G..............T.T...................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----CDR3-IMGT--->          
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  W  G  H  W  G  Q  
                    Query_5394   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGACCCTGGGGGCACTGGGGCCAGG  270
V  98.0% (243/248)  IGHV3-11*01  227  ..........................................................C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD7-27*01  5    ----------------------------------------------------------------------......--------------  10
J  97.4% (37/38)    IGHJ1*01     15   ----------------------------------------------------------------------------..............  28

                                                              
                                      G  T  L  V  T  V  S  S  
                    Query_5394   271  GCACCCTGGTCACTGTCTCCTCAG  294
J  97.4% (37/38)    IGHJ1*01     29   .............C..........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30621390


Query= Query_30966

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           12.2    33   
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GCCGCGAAAATCGGTCTTTGGACTACTTATCCC	TGGGGG	GGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCCGCGAAAATCGGTCTTTGGACTACTTATCCCTGGGGGGGGCGACTGGTTCGACCCC	ARGPRKSVFGLLIPGGGDWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  D  Y  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5395   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCGATTACTATTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (233/245)  IGHV4-34*01  49   .......................................AG.GGT..C..........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  G  A  T  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5395   91   TGGATTGGGGAAATCAATCATGGTGCAACGACCAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  .....................A...G..GC............C...............................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  K  S  V  F  G  L 
                    Query_5395   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGCCGCGAAAATCGGTCTTTGGACTA  270
V  95.1% (233/245)  IGHV4-34*01  229  ....................C............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      -IMGT--------------------------->                                  
                                       L  I  P  G  G  G  D  W  F  D  P  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_5395   271  CTTATCCCTGGGGGGGGCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  337
D  100.0% (6/6)     IGHD3-16*01  17   --------......-----------------------------------------------------  22
J  97.9% (47/48)    IGHJ5*02     4    -------------------................................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_30967

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            367     6e-104
IGHD2-15*01                                                                                           21.8    0.043 
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACTTAGGGCGAGGGGTC	GTGGTGGTAGC	CCTACCTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAACTTAGGGCGAGGGGTCGTGGTGGTAGCCCTACCTGGTACTTTGACTAC	ARELRARGRGGSPTWYFDY	250	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	135	27	25	2	0	92.6
FR3-IMGT	136	249	114	110	4	0	96.5
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	246	11	0	95.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  Y  S  A  A  W  N  W  I  R  Q  S  P  S  R  G 
                    Query_5396   1    ACCCTGTCCCTCACCTGTGCCATCTCCGGCGACAGTGTCTCTAGCTACAGTGCTGCTTGGAACTGGATCAGGCAGTCGCCATCGAGAGGC  90
V  95.7% (246/257)  IGHV6-1*01   49   .....C..A....................G...............A...............................C............  138
                                       T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R  Q  S  P  S  R  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  L  G  R  T  Y  S  R  S  K  W  Y  T  D  Y  A  V  S  V  K  S  R  M  T  I  N  P  D 
                    Query_5396   91   CTTGAGTGGCTGGGAAGGACATACTCCAGGTCCAAGTGGTATACTGATTATGCAGTCTCTGTGAAGAGTCGAATGACCATCAACCCAGAC  180
V  95.7% (246/257)  IGHV6-1*01   139  .........................A.................A............A........A........A...............  228
                                       L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R  I  T  I  N  P  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------------
                                       T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A  R  E  L  R  A  R 
                    Query_5396   181  ACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGCGCAAGAGAACTTAGGGCGAGG  270
V  95.7% (246/257)  IGHV6-1*01   229  ....................................................................T........-------------  305
                                       T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A  R                

                                      ---CDR3-IMGT----------------------->                                  
                                       G  R  G  G  S  P  T  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5396   271  GGTCGTGGTGGTAGCCCTACCTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  100.0% (11/11)   IGHD2-15*01  12   ----...........-------------------------------------------------------  22
J  100.0% (46/46)   IGHJ4*02     3    ------------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_30964

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         311     4e-87
IGHD7-27*01                                                                                           12.2    30   
IGHJ5*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCT	TAATTGGGG	CGCATTTGG	CCCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTTAATTGGGGCGCATTTGGCCCC	ARLNWGAFGP	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	223	24	0	90.3


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  F  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5397     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTACTTTTGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.3% (223/247)  IGHV3-30-3*01  47   .....................................C.......GC.A.........................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        D  W  V  A  V  L  S  H  D  A  S  S  E  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5397     91   ACTGGGTGGCAGTTCTGTCACATGATGCAAGCAGTGAATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCAAGGGACAATTCCA  180
V  90.3% (223/247)  IGHV3-30-3*01  137  .G............A.A...T......G.....A.A................C.......................C..A..........  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                        K  N  T  L  Y  L  E  M  H  S  L  G  V  D  D  T  A  I  Y  Y  C  A  R  L  N  W  G  A  F  G  
                    Query_5397     181  AGAACACGCTATATCTGGAGATGCACAGCCTTGGAGTTGACGACACGGCTATTTATTACTGTGCGAGGCTTAATTGGGGCGCATTTGGCC  270
V  90.3% (223/247)  IGHV3-30-3*01  227  ..........G......C.A...A.......GA...C...G.........G.G..............-----------------------  293
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  88.9% (8/9)      IGHD7-27*01    2    ----------------------------------------------------------------------...C.....-----------  10
J  89.5% (34/38)    IGHJ5*02       14   ----------------------------------------------------------------------------------------..  15

                                        ->                                  
                                        P  W  G  Q  G  A  L  V  P  V  P  S  
                    Query_5397     271  CCTGGGGCCAGGGGGCCCTGGTCCCCGTCCCCTCAG  306
J  89.5% (34/38)    IGHJ5*02       16   .............AA........A.....T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_30965

Length=315
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           212     4e-57
IGHD6-13*01                                                                                           16.1    2.0  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	RSIS*GVVRP	225	257	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	75	24	4	1	19	16.7
FR2-IMGT	76	86	51	11	0	40	21.6
CDR2-IMGT	87	110	24	22	2	0	91.7
FR3-IMGT	111	224	114	105	9	0	92.1
Total	N/A	N/A	283	211	13	59	74.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  M               
                    Query_5398   1    GCAGCTGGTGCAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGAAT---------------  75
V  74.6% (211/283)  IGHV3-33*03  6    ..........G..............................................................T.CACCTTCAGTAGCTA  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                                                                    G  G  S  Y  M  V  *  W  N  *  K  I  L  C  R 
                    Query_5398   76   --------------------------------------------GGGTGGCAGTTATATGGTATGATGGAATTAAAAAATTCTATGCAGA  121
V  74.6% (211/283)  IGHV3-33*03  96   TGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGT...........................G...T....A.........  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                       L  R  E  G  P  I  H  H  L  Q  R  R  L  Q  E  H  P  V  S  A  D  E  Q  P  E  S  R  R  H  G 
                    Query_5398   122  CTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCAAGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGACGACACGGC  211
V  74.6% (211/283)  IGHV3-33*03  186  ..................................A.............G....A......A....................G........  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                       S  L  L  L  Y  R  S  I  S  *  G  V  V  R  P  L  G  P  G  N  P  G  H  R  L  L   
                    Query_5398   212  TCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  291
V  74.6% (211/283)  IGHV3-33*03  276  .G.G.....C...-------------------------------------------------------------------  288
                                        V  Y  Y  C                                                                    
D  90.9% (10/11)    IGHD6-13*01  7    ------------------....G......---------------------------------------------------  17
J  100.0% (46/46)   IGHJ5*02     6    ----------------------------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30410208


Query= Query_30962

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            394     6e-112
IGHJ5*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	N/A	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	GCCGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCCGACACTGGTTCGACCCC	ARGRHWFDP	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  A  C  A  A  S  G  F  N  F  N  H  Y
                    Query_5399  1    GCAGCTGGTGCAGTCTGGAGGAGGCCTGGTCCAGCCTGGGGGGTCCCTGAGACTCGCCTGTGCAGCCTCTGGATTCAACTTTAATCACTA  90
V  93.4% (271/290)  IGHV3-7*03  6    ..........G.......G......T.............................T.....................C.....G.AG...  95
                                       Q  L  V  E  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       W  M  S  W  V  R  Q  A  P  G  K  G  L  E  C  V  A  N  I  K  H  D  A  S  E  E  Y  Y  V  E
                    Query_5399  91   TTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGCGTGGCCAACATAAAGCATGATGCAAGTGAGGAATACTATGTGGA  180
V  93.4% (271/290)  IGHV3-7*03  96   .........C...................................G.................A....G.......A.............  185
                                       W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  V  H  L  Q  M  N  S  L  R  A  E  D  T  A
                    Query_5399  181  GTCTGTGAAGGGCCGATTCACCATCTCCCGAGACAACGCCAAGAACTCAGTCCATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGC  270
V  93.4% (271/290)  IGHV3-7*03  186  C...........................A....................C.GT.....................................  275
                                       S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                     ------------><--------CDR3-IMGT-------->                                  
                                       V  Y  Y  C  A  R  G  R  H  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5399  271  CGTGTATTACTGTGCGCGAGGCCGACACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  344
V  93.4% (271/290)  IGHV3-7*03  276  ................A...------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                        
J  100.0% (48/48)   IGHJ5*02    4    --------------------------................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_30963

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           277     1e-76
IGHD2-15*01                                                                                           21.8    0.044
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATAGGC	AGTGGTGGTGGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATAGGCAGTGGTGGTGGCTGCTACTTTGACAAC	ARRLGSGVPCTPFRIGSGGGCYFDN	244	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	213	36	0	85.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  P  G  D  S  I  S  S  D  S  F  Y  W  A  W  I  R  Q  S  P  V  K  G 
                    Query_5400   1    ACCCTGTCCCTCACCTGCACTGTTCCCGGTGATTCCATCAGCAGTGACAGTTTCTACTGGGCCTGGATCCGCCAGTCCCCAGTGAAGGGA  90
V  85.5% (213/249)  IGHV4-39*02  49   .......................CT.T....GC............AGT....A........G.............C......G......G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  M  F  N  G  G  R  T  Y  S  N  P  S  L  K  N  R  V  T  I  S  A  D  T  S 
                    Query_5400   91   CTGGAGTGGATAGGGACTATGTTTAATGGTGGACGCACCTATTCCAACCCGTCCCTCAAGAATCGAGTCACCATATCTGCGGACACGTCC  180
V  85.5% (213/249)  IGHV4-39*02  139  ...........T....G...C.A.T..A....GA.......C.A.................G...............C.TA.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       R  N  H  F  S  L  R  L  T  Y  V  T  S  A  D  S  G  V  Y  Y  C  A  R  R  L  G  S  G  V  P 
                    Query_5400   181  AGGAACCACTTCTCCCTGAGGCTGACCTATGTGACCTCCGCAGACAGCGGTGTCTATTACTGTGCGAGACGTCTTGGGTCCGGTGTCCCC  270
V  85.5% (213/249)  IGHV4-39*02  229  .A.................A.....G..C.......G.........CG.C...G...............---------------------  297
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      ------CDR3-IMGT-------------------------------->                                 
                                       C  T  P  F  R  I  G  S  G  G  G  C  Y  F  D  N  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_5400   271  TGTACTCCCTTCCGCATAGGCAGTGGTGGTGGCTGCTACTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  351
D  92.9% (13/14)    IGHD2-15*01  11   ---------------------.........A....----------------------------------------------  24
J  97.8% (45/46)    IGHJ4*02     2    -----------------------------------..........T...................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_30960

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*02                                                                                            403     1e-114
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAC	TTGTCTTACGA	TGGTTATCACTAC	CCCTTCCG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACTTGTCTTACGATGGTTATCACTACCCCTTCCGCTTTGACTCC	AHLSYDGYHYPFRFDS	263	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	29	1	0	96.7
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	148	21	20	1	0	95.2
FR3-IMGT	149	262	114	112	2	0	98.2
CDR3-IMGT (germline)	263	268	6	6	0	0	100
Total	N/A	N/A	268	263	5	0	98.1


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  F  S  T  S  G  V  G  V  G  W  I  R
                    Query_5401   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCATTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCG  90
V  98.1% (263/268)  IGHV2-5*02   30   .......................................................C..................................  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  Y  D  K  R  Y  S  P  S  L  K  S  R  L  T
                    Query_5401   91   TCAGCCCCCAGGAAAGGCCCTGGAATGGCTTGCACTCATTTATTGGGATTATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGACTCAC  180
V  98.1% (263/268)  IGHV2-5*02   120  ........................G........................G..................................G.....  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  T  K  D  T  S  K  N  Q  V  L  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  L
                    Query_5401   181  CATCACCAAGGACACCTCCAAAAACCAGGTGCTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACTT  270
V  98.1% (263/268)  IGHV2-5*02   210  ...............................G........................................................--  297
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                      ------------CDR3-IMGT------------------>                                  
                                        S  Y  D  G  Y  H  Y  P  F  R  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5401   271  GTCTTACGATGGTTATCACTACCCCTTCCGCTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  344
D  92.3% (12/13)    IGHD3-22*01  19   ---------.......T.....----------------------------------------------------  31
J  97.7% (43/44)    IGHJ4*02     5    ------------------------------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_284719

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-16*02                                                                                           12.2    32   
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGT	TCGTTA	CCCAATCTTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTTCGTTACCCAATCTTGGCTACTACTACGGTATGGACGTC	ARDRSLPNLGYYYGMDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  M  G  L  E 
                    Query_5402   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGATGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...............................G.........T...........................C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  Y  S  G  T  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_5402   91   TGGATTGGGCATATCTATTACAGTGGGACCACCAGTTACAATCCTTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAT  180
V  93.5% (229/245)  IGHV4-59*01  139  .........T..................G.....AC.....C..C...........................G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  S  L  P  N  L  G  Y 
                    Query_5402   181  CAGTTCTCCCTGAAGCTGAATTCCGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATCGTTCGTTACCCAATCTTGGCTAC  270
V  93.5% (229/245)  IGHV4-59*01  229  ...................GC..T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*02  28   ---------------------------------------------------------------------......---------------  33
J  96.4% (53/55)    IGHJ6*02     8    --------------------------------------------------------------------------------------....  11

                                      ----------------->                                 
                                       Y  Y  G  M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_5402   271  TACTACGGTATGGACGTCTGGGGCCAAGGGGCCACCGTCACCGTCTCCTCA  321
J  96.4% (53/55)    IGHJ6*02     12   ..............................A....G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_213742

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           330     1e-92
IGHD4-4*01                                                                                            14.1    8.4  
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-4*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCCC	CTACAGT	GGTAACTTCCGACT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCCCCTACAGTGGTAACTTCCGACTTGATGCCTTTGATATC	ARSPYSGNFRLDAFDI	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	23	1	0	95.8
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	18	6	0	75
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	231	221	10	0	95.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  M 
                    Query_5403   13   TGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATG  102
V  95.7% (221/231)  IGHV3-21*01  64   ...................................C.....................................................T  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  S  T  R  N  I  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_5403   103  AGTAGTTCTACTCGTAACATATACTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTCTATCTG  192
V  95.7% (221/231)  IGHV3-21*01  154  ......AG..G.A..T....................G..............................................G......  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  P  Y  S  G  N  F  R  L  D  A  F  D 
                    Query_5403   193  CAAATAAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGATCCCCCTACAGTGGTAACTTCCGACTTGATGCCTTTGAT  282
V  95.7% (221/231)  IGHV3-21*01  244  .....G.............................................---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (7/7)     IGHD4-4*01   4    --------------------------------------------------------.......---------------------------  10
J  96.0% (48/50)    IGHJ3*02     1    -----------------------------------------------------------------------------......T......  13

                                      -->                                  
                                       I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5403   283  ATCTGGGGCCAAGGGACATTGGTCACCGTCTCTTCAG  319
J  96.0% (48/50)    IGHJ3*02     14   ..................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_137104

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           274     8e-76
IGHD6-25*01                                                                                           18.0    0.59 
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTG	GCAGCGGCT	GCCACGAACTTCTATCACGACGAAC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCTGGCAGCGGCTGCCACGAACTTCTATCACGACGAACTGGACGTC	VRDLAAAATNFYHDELDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	12	9	0	57.1
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	210	35	0	85.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  P  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5404   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCCCTGGCTTCTACTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  85.7% (210/245)  IGHV4-59*01  49   .............................T.........AG.A.T.A...........................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  F  Y  H  N  G  E  S  N  Y  N  P  P  L  K  S  R  V  S  I  S  L  D  M  S  K  S 
                    Query_5404   91   TGGATTGGCCACTTCTACCACAATGGCGAGTCCAACTACAATCCCCCCCTCAAGAGTCGAGTCTCCATTTCTCTGGACATGTCCAAGAGT  180
V  85.7% (210/245)  IGHV4-59*01  139  ........GT.TA....TT...G...GAGCA..........C...T.................A....A..AG.A....C........AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  F  T  S  V  T  A  A  D  T  A  V  Y  F  C  V  R  D  L  A  A  A  A  T  N  F 
                    Query_5404   181  CAGTTCTCCCTGAAGTTCACTTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGTGAGAGATCTGGCAGCGGCTGCCACGAACTTC  270
V  85.7% (210/245)  IGHV4-59*01  229  ...............C.G.GC...............................A.....C......-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-25*01  8    ---------------------------------------------------------------------.........------------  16

                                      -------------------->                                 
                                       Y  H  D  E  L  D  V  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_5404   271  TATCACGACGAACTGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTCA  324
J  97.6% (40/41)    IGHJ6*02     22   -------------........................C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_117065

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           420     7e-120
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTAGAA	GGTTCGGGGAGT	CACGACTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTAGAAGGTTCGGGGAGTCACGACTCTTACTACTACGCTATGGACGTC	ARDPLEGSGSHDSYYYAMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  R  Y
                    Query_5405   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGGTA  90
V  96.2% (280/291)  IGHV1-46*01  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  I  I  N  P  S  G  G  T  T  K  Y  A  Q
                    Query_5405   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCAATAATCAATCCTAGTGGTGGTACCACAAAATACGCACA  180
V  96.2% (280/291)  IGHV1-46*01  96   ..................................................G.........C.............G.....GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  D  L  T  S  L  R  S  E  D  T  A
                    Query_5405   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGACCTGACCAGCCTGAGATCTGAGGACACGGC  270
V  96.2% (280/291)  IGHV1-46*01  186  ............................................................G....G........................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        I  Y  Y  C  A  R  D  P  L  E  G  S  G  S  H  D  S  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T
                    Query_5405   271  CATCTATTACTGTGCGAGAGATCCTTTAGAAGGTTCGGGGAGTCACGACTCTTACTACTACGCTATGGACGTCTGGGGCCAAGGGACCAC  360
V  96.2% (280/291)  IGHV1-46*01  276  .G.G.................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD3-10*01  11   -------------------------------............-----------------------------------------------  22
J  98.1% (53/54)    IGHJ6*02     9    ----------------------------------------------------..........G...........................  46

                                                      
                                        V  T  V  S  S 
                    Query_5405   361  GGTCACCGTCTCCTCA  376
J  98.1% (53/54)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_306953

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     9e-121
IGHD5-12*01                                                                                           16.1    2.6   
IGHJ2*01                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAC	GGATGAGAGA	TGGCTACAATT	TTGTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACGGATGAGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTC	ATRMRDGYNFVDWYFDL	292	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	70	1	0	98.6
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	109	5	0	95.6
CDR3-IMGT (germline)	292	298	7	6	1	0	85.7
Total	N/A	N/A	291	281	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  N  F  A  N  
                    Query_5406   8    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAACTTTGCCAACT  97
V  96.6% (281/291)  IGHV5-51*01  5    ..................................................................G...........G....A...G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  
                    Query_5406   98   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCC  187
V  96.6% (281/291)  IGHV5-51*01  95   .................................................................................G........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  H  W  S  S  L  Q  A  S  D  T  
                    Query_5406   188  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCACTGGAGTAGCCTCCAGGCCTCGGACACCG  277
V  96.6% (281/291)  IGHV5-51*01  185  .............................................................G.....C.....GA...............  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><--------------------CDR3-IMGT-------------------->                         
                                      A  M  Y  Y  C  A  T  R  M  R  D  G  Y  N  F  V  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  
                    Query_5406   278  CCATGTATTACTGTGCGACACGGATGAGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTG  367
V  96.6% (281/291)  IGHV5-51*01  275  ..................G..---------------------------------------------------------------------  295
                                      A  M  Y  Y  C  A  R                                                                       
D  90.9% (10/11)    IGHD5-12*01  11   -------------------------------.......G...------------------------------------------------  21
J  100.0% (51/51)   IGHJ2*01     3    ------------------------------------------------..........................................  44

                                               
                                      V  S  S  
                    Query_5406   368  TCTCCTCAG  376
J  100.0% (51/51)   IGHJ2*01     45   .........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_284711

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           283     1e-78
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ATTACTCTGGTTCGGGGA	AAAGTCAAGGATTTCGGAAAT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGATTACTCTGGTTCGGGGAAAAGTCAAGGATTTCGGAAATTGGCTCGACCCC	ARDRITLVRGKVKDFGNWLDP	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	96	18	0	84.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	216	35	0	86.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  D  G  G  Y  T  W  N  W  I  R  Q  H  P  Q  K  G 
                    Query_5407   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGTGATGGTGGTTATACCTGGAATTGGATCCGCCAGCACCCACAGAAGGGC  90
V  86.1% (216/251)  IGHV4-31*03  49   ...............................G.........CAG.........CTA.....GC..................GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  A  Y  S  G  R  A  D  Y  N  P  S  L  R  S  R  L  S  V  S  K  G  T  S 
                    Query_5407   91   CTGGAGTGGCTTGGGTCCATCGCTTACAGTGGGAGAGCCGATTACAATCCGTCCCTCAGGAGTCGACTTTCCGTGTCGAAAGGCACGTCT  180
V  86.1% (216/251)  IGHV4-31*03  139  .........A......A....TA............CA..T.C.....C..........A.......G..A..A.A..AGT..A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  V  S  L  N  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  I  T  L  V  R 
                    Query_5407   181  AAGAACCAGGTCTCCCTTAACGTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTATTGTGCGAGAGATCGGATTACTCTGGTTCGG  270
V  86.1% (216/251)  IGHV4-31*03  229  .........T.......G..GC...............................G.....C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  3    ---------------------------------------------------------------------------......A........  17

                                      CDR3-IMGT-------------------------->                                  
                                       G  K  V  K  D  F  G  N  W  L  D  P  W  G  Q  G  T  Q  V  I  V  T  S  
                    Query_5407   271  GGAAAAGTCAAGGATTTCGGAAATTGGCTCGACCCCTGGGGCCAGGGAACCCAGGTCATCGTCACCTCAG  340
D  94.4% (17/18)    IGHD3-10*01  18   ...-------------------------------------------------------------------  20
J  91.3% (42/46)    IGHJ5*02     6    ------------------------...T........................T.....C....T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_315755

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            260     1e-71
IGHD3-10*01                                                                                           12.2    32   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	22	5	0	81.5
FR2-IMGT	57	107	51	48	3	0	94.1
CDR2-IMGT	108	128	21	14	7	0	66.7
FR3-IMGT	129	242	114	96	18	0	84.2
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	207	41	0	83.5


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_5408   1    GGTCCCTGAGACTCTCCTGTACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGC  90
V  83.5% (207/248)  IGHV4-4*01   47   ..A.....TCC...A....CG.........G...........G..GT.....C..........................A..........  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  S  M  S  V  D  K  S  
                    Query_5408   91   TGGAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCAGCATGTCAGTAGACAAGTCCA  180
V  83.5% (207/248)  IGHV4-4*01   137  ....G...........A.........A.T..GAG.AC.......AAC...T.....A............C...A................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  T  L  T  S  L  N  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  
                    Query_5408   181  AGAATCAATTCTCCCTCACGCTGACGTCTCTGAACGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTC  270
V  83.5% (207/248)  IGHV4-4*01   227  ....C..G........G.A.....GC...G...C..................G....G...T...A..----------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01  14   ----------------------------------------------------------------------------------------..  15

                                      ------------->                                  
                                      R  G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_5408   271  GGGGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  318
D  100.0% (6/6)     IGHD3-10*01  16   ....--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    -----.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_315756

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           336     1e-94
IGHD5-18*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GATCTGG	GTGGATACAACTATG	TT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGAGATCTGGGTGGATACAACTATGTTCTTTGGCGAC	TREIWVDTTMFFGD	235	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	18	21	4	4	0	0	100
CDR1-IMGT	22	45	24	24	0	0	100
FR2-IMGT	46	96	51	50	1	0	98
CDR2-IMGT	97	120	24	23	1	0	95.8
FR3-IMGT	121	234	114	112	2	0	98.2
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	225	220	5	0	97.8


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  F  I  W  Y  D
                    Query_5409   18   GTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCATTTATATGGTATGA  107
V  97.8% (220/225)  IGHV3-33*01  72   ............................................................................G.............  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  K  K  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  S
                    Query_5409   108  TGGAAGTAAAAAAAACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAG  197
V  97.8% (220/225)  IGHV3-33*01  162  .........T...T...........................................................................A  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------------CDR3-IMGT--------------->           
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  E  I  W  V  D  T  T  M  F  F  G  D  W  G  Q  G
                    Query_5409   198  CAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTACGAGAGAGATCTGGGTGGATACAACTATGTTCTTTGGCGACTGGGGCCAGGG  287
V  97.8% (220/225)  IGHV3-33*01  252  .....................................G.......---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  93.3% (14/15)    IGHD5-18*01  1    ----------------------------------------------------.........G.....-----------------------  15
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------------------------------------------.....A.T.............  25

                                                             
                                        T  L  V  T  V  S  S  
                    Query_5409   288  AACCCTGGTCACCGTCTCCTCAG  310
J  95.5% (42/44)    IGHJ4*02     26   .......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_284712

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           343     2e-96
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGTCGTCGAGGGCACACGACATT	TATAGCAGTGGCTGG	GGGAGGCCGGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGTCGTCGAGGGCACACGACATTTATAGCAGTGGCTGGGGGAGGCCGGCTGACTAC	ARASSRAHDIYSSGWGRPADY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  D  S  G  F  T  F  S  S  H  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5410   1    GGTCCCTGAGACTCTCCTGTGCAGACTCTGGATTCACCTTCAGTAGCCACGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-30*03  47   ........................C......................T.T........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  S  Y  E  G  S  T  K  Y  Y  V  D  S  V  K  G  R  F  T  A  S  R  D  N  S  
                    Query_5410   91   AGTGGGTGGCTTTTATATCATATGAAGGAAGTACTAAATACTATGTAGACTCCGTGAAGGGCCGGTTCACCGCCTCCAGAGACAATTCCA  180
V  94.0% (234/249)  IGHV3-30*03  137  ..........AG.............T.......A...........C..................A......AT.................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  P  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  A  S  S  R  A  H  D  
                    Query_5410   181  AGAACACACTGTATCCGCAAATGAACAGCCTGAGAGCTGATGACACGGCTGTCTATTACTGTGCGAGAGCGTCGTCGAGGGCACACGACA  270
V  94.0% (234/249)  IGHV3-30*03  227  .......G.......T........................G...........G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      DR3-IMGT-------------------------->                                  
                                      I  Y  S  S  G  W  G  R  P  A  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_5410   271  TTTATAGCAGTGGCTGGGGGAGGCCGGCTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  339
D  100.0% (15/15)   IGHD6-19*01  4    --...............----------------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    ----------------------------..............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_315750

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           346     2e-97
IGHD3-10*01                                                                                           43.0    2e-08
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_5411   4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  94.4% (235/249)  IGHV4-31*02  50   .....TCC...A.....A...........GG.......A...................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  
                    Query_5411   94   TCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCTA  183
V  94.4% (235/249)  IGHV4-31*02  140  .G...............................G...............................G.............A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G  
                    Query_5411   184  AGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGGA  273
V  94.4% (235/249)  IGHV4-31*02  230  ........................G................................A...........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (22/22)   IGHD3-10*01  7    ----------------------------------------------------------------------------..............  20

                                      ---------------->                                  
                                      S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5411   274  GTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (22/22)   IGHD3-10*01  21   ........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ---------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_284714

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5412   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5412   91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_5412   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  95.5% (231/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5412   271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_284717

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD5-18*01                                                                                           21.8    0.041
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGAA	GTGGATACAACTTTGGT	CAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGAAGTGGATACAACTTTGGTCATAACTGGTTCGACCCC	ARDPTGSGYNFGHNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  H  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5413   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATAAGTCATTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  93.5% (229/245)  IGHV4-59*01  49   ...............................G......C...AG............C................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  T  S  V  D  T  T  K  N 
                    Query_5413   91   TGGATTGGATATATCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCACGTCAGTAGACACGACCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G......T...................................................TA............T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  S  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_5413   181  CAGTTCTCCCTGAGCCTCAGTTCTGTGACCGTTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCCTACCGGAAGTGGATACAACTTT  270
V  93.5% (229/245)  IGHV4-59*01  229  .............AG..G..C..........C.................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.2% (15/17)    IGHD5-18*01  1    ----------------------------------------------------------------------------.........G..A.  14

                                      -------------------->                                  
                                       G  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5413   271  GGTCATAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTAACCGTCTCCTCAG  325
D  88.2% (15/17)    IGHD5-18*01  15   ...----------------------------------------------------  17
J  98.0% (48/49)    IGHJ5*02     3    ------...................................C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_315753

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           330     1e-92
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  A  L  E 
                    Query_5414   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGCACTGGAG  90
V  93.1% (228/245)  IGHV4-59*08  49   ...........................................G......................................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  F  Y  T  G  T  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5414   91   TGGATCGGGTCTATCTTTTACACTGGGACCACCAACTACGACCCCTCTCTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGAAC  180
V  93.1% (228/245)  IGHV4-59*08  139  .....T....A.....A.....G.....G..........A.......C....................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  V  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  H  R  A  A  A  G  P 
                    Query_5414   181  CAGTTCTCCCTGAGAGTGACCTCTCTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATCCCCATAGAGCAGCAGCTGGCCCC  270
V  93.1% (228/245)  IGHV4-59*08  229  .............AGC...G....G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD6-13*01  7    --------------------------------------------------------------------------............----  18
J  93.2% (41/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_5414   271  TTTGACAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  313
J  93.2% (41/44)    IGHJ4*02     6    ......T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_185982

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD6-19*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TTCCTCT	TGGCTGG	GACC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATTCCTCTTGGCTGGGACCTGATGCTTTTCAAATC	ARDSSWLGPDAFQI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5415   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGAAGTTACTACTGGAATTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G.........T.............GC.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  S  G  T  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  G  D  T  S  K  N 
                    Query_5415   91   TGGATTGGGTATATGTATTACAGTGGGACTACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGGAGACACGTCTAAGAAC  180
V  92.7% (227/245)  IGHV4-59*01  139  ..............C.............GC.....................A.....................T.........C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  F  L  T  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  D  S  S  W  L  G  P  D  A 
                    Query_5415   181  CAATTTTTCCTGACGTTGAGCTCTGTGACCGCTGCGGACACGGCCATGTATTATTGTGCGAGGGATTCCTCTTGGCTGGGACCTGATGCT  270
V  92.7% (227/245)  IGHV4-59*01  229  ..G..C.C.....A.C.............................G.......C........A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD6-19*01  12   ------------------------------------------------------------------------.......-----------  18
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------------------.......  7

                                      -------->                                  
                                       F  Q  I  W  G  Q  G  T  I  V  T  V  S  S  
                    Query_5415   271  TTTCAAATCTGGGGCCAGGGGACAATTGTCACCGTGTCTTCAG  313
J  90.0% (45/50)    IGHJ3*02     8    ...G.T...........A........G........C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_351769

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           321     7e-90
IGHD3-10*01                                                                                           12.2    33   
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCCGATCA	ACTTTGGTT	TCTTGGGACCACAGTCGGGATTG	TACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCCGATCAACTTTGGTTTCTTGGGACCACAGTCGGGATTGTACTCTGACTAC	ARSPINFGFLGPQSGLYSDY	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  K 
                    Query_5416   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCCTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGAAG  90
V  92.2% (224/243)  IGHV4-34*01  49   ....................................T..............................................G...G..  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  L  R  G  G  T  N  Y  H  P  S  L  K  S  R  A  S  I  S  T  D  A  S  K  N 
                    Query_5416   91   TGGATTGGGGAAATCAATCTTCGTGGAGGCACCAACTACCACCCGTCCCTCAAGAGTCGGGCCTCCATATCAACGGACGCGTCGAAGAAT  180
V  92.2% (224/243)  IGHV4-34*01  139  ...................A.A.....A...........A...................A.T.A........GTA...A....C.....C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  I  N  F  G  F  L  G 
                    Query_5416   181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCCGCGGACACGGCTGTATATTACTGTGCGAGAAGCCCGATCAACTTTGGTTTCTTGGGA  270
V  92.2% (224/243)  IGHV4-34*01  229  ...................GC..........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (8/9)      IGHD3-10*01  6    -------------------------------------------------------------------------...A.....--------  14

                                      GT------------------------>                                  
                                       P  Q  S  G  L  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5416   271  CCACAGTCGGGATTGTACTCTGACTACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  331
J  95.7% (44/46)    IGHJ4*02     3    ---------------....T..................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_351768

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD1-26*01                                                                                           10.3    112  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCGGAAGAA	GGGAG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGGAAGAAGGGAGATTGACTAC	AGGRREIDY	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	225	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  N  H  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5417   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTAATCACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.8% (225/240)  IGHV4-59*01  49   ........................................G..G.T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  D  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5417   91   TGGATTGGGTATCTTTATTACGATGGTGACACCAAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  93.8% (225/240)  IGHV4-59*01  139  ............A.C......AG...GAG......C......................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  G  R  R  E  I  D  Y  W  G 
                    Query_5417   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGGGCGGAAGAAGGGAGATTGACTACTGGGGC  270
V  93.8% (225/240)  IGHV4-59*01  229  ...............C...............................G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  9    ----------------------------------------------------------------------.....---------------  13
J  100.0% (42/42)   IGHJ4*02     7    ----------------------------------------------------------------------------..............  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_5417   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  100.0% (42/42)   IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_57281

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ2*01                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	TACTATAATCCTAGTGGTTATTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACTATAATCCTAGTGGTTATTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGYYGYWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	239	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_5418   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.6% (239/245)  IGHV4-59*01  49   ............................................................A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  I  S  K  N 
                    Query_5418   91   TGGATTGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGATATCTCCAAGAAC  180
V  97.6% (239/245)  IGHV4-59*01  139  ........G....................................................................C.CG.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  Y  Y 
                    Query_5418   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACTACTATAATCCTAGTGGTTATTAC  270
V  97.6% (239/245)  IGHV4-59*01  229  ...................G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (21/24)    IGHD3-22*01  5    ------------------------------------------------------------------......G..AG.............  28

                                      -------------------->                                  
                                       G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_5418   271  GGGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  325
J  100.0% (52/52)   IGHJ2*01     2    ---....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_351765

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           325     3e-91
IGHD2-15*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGCCCGCTGCCC	GTGGTGGGTGCTA	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATCAGCCCGCTGCCCGTGGTGGGTGCTATGACTAC	VRDQPAARGGCYDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  L  R  S  H  W  M  H  W  V  R  Q  D  P  G  K  G  L  
                    Query_5419   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCCTCAGAAGCCACTGGATGCACTGGGTCCGCCAAGATCCAGGGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-74*01  47   .....................C................T....T...T........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  A  R  I  N  F  D  G  S  S  T  S  Y  V  D  S  V  K  G  R  F  N  I  S  R  D  N  A  
                    Query_5419   91   TATGGGTCGCACGTATTAATTTTGATGGGAGTAGTACAAGTTATGTGGACTCCGTCAAGGGCCGATTCAACATCTCCAGAGACAACGCCA  180
V  91.6% (229/250)  IGHV3-74*01  137  .G......T...........AG............C.....C..C.C.........G.............C....................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  G  V  Y  Y  C  V  R  D  Q  P  A  A  R  G  
                    Query_5419   181  AGAACACATTGTATCTGCAAATGAATAGTCTGAGAGTCGAGGACACGGGTGTGTATTACTGTGTAAGAGATCAGCCCGCTGCCCGTGGTG  270
V  91.6% (229/250)  IGHV3-74*01  227  .......GC................C..........C...........C..............C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.6% (11/13)    IGHD2-15*01  15   ------------------------------------------------------------------------------------.....A  20

                                      ------------->                                  
                                      G  C  Y  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_5419   271  GGTGCTATGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  318
D  84.6% (11/13)    IGHD2-15*01  21   .C.....-----------------------------------------  27
J  97.6% (40/41)    IGHJ4*02     8    -------...................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_351764

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           307     1e-85
IGHD4-17*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD4-17*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACTA	CTGG	ACGGTG	GCCCCCTCGGC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTACTGGACGGTGGCCCCCTCGGCAC	TTGRWPPRH	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	104	10	0	91.2
CDR3-IMGT (germline)	249	252	4	4	0	0	100
Total	N/A	N/A	252	224	28	0	88.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  L  N  F  G  V  F  G  L  N  W  V  R  L  A  P  G  K  G  L  
                    Query_5420   1    GGTCCCTGAGACTCTCCTGTGCAGTTTCTGGACTCAACTTTGGTGTTTTTGGTCTGAACTGGGTCCGCCTGGCTCCAGGGAAGGGGCTGG  90
V  88.9% (224/252)  IGHV3-49*04  47   ....................A...C.......T...C........A..A..C.A...G...........A....................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      A  W  V  S  F  F  S  S  R  T  D  G  G  T  T  E  Y  G  A  A  V  K  R  R  F  T  M  S  R  D  
                    Query_5420   91   CGTGGGTAAGCTTCTTTAGCAGCAGAACTGATGGTGGGACAACAGAATATGGCGCGGCTGTGAAGCGCAGATTCACGATGTCAAGAGATG  180
V  88.9% (224/252)  IGHV3-49*04  137  A.......G.T...A....A....A.G..T...................C.C....T.......AG..........C..C..........  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  K  S  L  A  *  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  G  R  W  P  P  
                    Query_5420   181  ATTCCAAAAGCCTCGCCTAACTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGCACTACTGGACGGTGGCCCCCTC  270
V  88.9% (224/252)  IGHV3-49*04  227  ...........A.......T...............................................T....------------------  298
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (6/6)     IGHD4-17*01  6    ----------------------------------------------------------------------------......--------  11

                                      ---->                                
                                      R  H  W  G  Q  G  T  L  V  T  V  A  S
                    Query_5420   271  GGCACTGGGGCCAGGGAACCCTGGTCACCGTCGCCTC  307
J  97.1% (33/34)    IGHJ4*02     13   ---.............................T....  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_351767

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           329     3e-92
IGHD6-19*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCCTCCCCCCTCAC	TATATCAATGGCTGGTAC	T	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCCTCCCCCCTCACTATATCAATGGCTGGTACTTTTGCCTAC	ASSPLTISMAGTFAY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	225	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5421   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATAAGTAGTTATTACTGGAACTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  93.8% (225/240)  IGHV4-59*08  49   ..................A...................C........C.......G.....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  S  A  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  S  S  K  N 
                    Query_5421   91   TGGATTGGCTATGTCTATTACAGTGGGAGCGCCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCGGTGGACTCGTCCAAGAAC  180
V  93.8% (225/240)  IGHV4-59*08  139  ........G...A.................A.....................................A..A..A...A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  S  P  L  T  I  S  M  A  G 
                    Query_5421   181  CAGTTCTCCCTGAGGCTGACTTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGTCCTCCCCCCTCACTATATCAATGGCTGGT  270
V  93.8% (225/240)  IGHV4-59*08  229  .............A.....GC.......................................------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  88.9% (16/18)    IGHD6-19*01  4    --------------------------------------------------------------------------....G..G........  19

                                      ----------->                                  
                                       T  F  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5421   271  ACTTTTGCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  88.9% (16/18)    IGHD6-19*01  20   ..--------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    ---....A......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_351766

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*05                                                                                           343     2e-96
IGHD3-10*01                                                                                           33.4    1e-05
IGHJ1*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*05	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GAG	ACTATGGCTCGGGGAGTTAT	CCCCTTG	AGCAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGGAGACTATGGCTCGGGGAGTTATCCCCTTGAGCAC	TTGDYGSGSYPLEH	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	102	12	0	89.5
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	237	18	0	92.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  V  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5422   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTGTCAGTGTCGCCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.9% (237/255)  IGHV3-15*05  47   .......T..............................T.....AA...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  D  R  F  T  I  S  R  N  
                    Query_5422   91   AGTGGGTTGGCCGTATTAAGAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAGGACAGATTCACCATCTCAAGAAATG  180
V  92.9% (237/255)  IGHV3-15*05  137  ...................A............................................A.G...................G...  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  N  T  V  H  L  Q  M  N  S  V  K  T  E  D  T  A  V  Y  Y  C  T  T  G  D  Y  G  S  
                    Query_5422   181  ATTCAAAGAACACAGTACACCTGCAAATGAACAGTGTGAAGACCGAGGACACAGCCGTGTATTATTGTACCACAGGAGACTATGGCTCGG  270
V  92.9% (237/255)  IGHV3-15*05  227  .......A.....GC.GT.T...............C....A.......................C..........---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  95.0% (19/20)    IGHD3-10*01  6    ------------------------------------------------------------------------------.......T....  17

                                      IMGT--------------->                                  
                                      G  S  Y  P  L  E  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5422   271  GGAGTTATCCCCTTGAGCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  95.0% (19/20)    IGHD3-10*01  18   ........----------------------------------------------  25
J  97.4% (38/39)    IGHJ1*01     14   ---------------................C......................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_351760

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           313     1e-87
IGHD2-21*01                                                                                           10.3    124  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTTATCCTT	CATAT	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTTATCCTTCATATAACTACGGTATGGACGCC	ARSYPSYNYGMDA	255	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	254	129	106	8	15	82.2
CDR3-IMGT (germline)	255	260	6	6	0	0	100
Total	N/A	N/A	260	232	13	15	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5423   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAATTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.2% (232/260)  IGHV3-53*01  47   .................................................C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><------------------------------------------------------
                                      E  W  V  S  L  I  C  S  G  P  S  T  Y  D  A  E  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  
                    Query_5423   91   AGTGGGTCTCACTTATTTGTAGCGGTCCTAGCACATACGACGCAGAGACACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCA  180
V  89.2% (232/260)  IGHV3-53*01  137  ...........G......A.......GG........---------------.............C.........................  211
                                      E  W  V  S  V  I  Y  S  G  G  S  T                 Y  Y  A  D  S  V  K  G  R  F  T  I  S  

                                      -----FR3-IMGT------------------------------------------------------------><--------------C
                                      R  D  N  R  K  N  T  L  Y  L  Q  L  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  Y  P  
                    Query_5423   181  GGGACAATCGCAAGAACACACTGTATCTTCAATTGCACAGTCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGATCTTATCCTT  270
V  89.2% (232/260)  IGHV3-53*01  212  .A......TC.........G............A..A....C.......................................----------  291
                                      R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R           

                                      DR3-IMGT-------------->                                 
                                      S  Y  N  Y  G  M  D  A  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5423   271  CATATAACTACGGTATGGACGCCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
D  100.0% (5/5)     IGHD2-21*01  3    .....---------------------------------------------------  7
J  98.0% (49/50)    IGHJ6*02     13   ------...............T..................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_351762

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD5-18*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5424   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGTTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  97.9% (238/243)  IGHV4-59*01  49   ................................C.....................................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5424   91   TGGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  .........T................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_5424   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTAC  270
V  97.9% (238/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (18/20)    IGHD5-18*01  1    ----------------------------------------------------------------..........C.....T...------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5424   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_308179

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           299     2e-83
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAGTACCAA	ATAGCAGT	CCAATACCCCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCCAGTACCAAATAGCAGTCCAATACCCCCCCTTTGACTTC	VRGQYQIAVQYPPFDF	233	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	9	19	11	10	1	0	90.9
CDR1-IMGT	20	43	24	17	7	0	70.8
FR2-IMGT	44	94	51	46	5	0	90.2
CDR2-IMGT	95	118	24	23	1	0	95.8
FR3-IMGT	119	232	114	109	5	0	95.6
CDR3-IMGT (germline)	233	239	7	6	1	0	85.7
Total	N/A	N/A	231	211	20	0	91.3


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         E  A  S  G  F  S  L  T  D  Y  A  T  Y  W  V  R  Q  A  P  G  K  G  P  E  W  V  A  L  I  
                    Query_5425   9    GTGAAGCCTCTGGATTCAGCTTGACTGACTATGCAACGTACTGGGTCCGCCAGGCTCCAGGCAAGGGGCCGGAGTGGGTGGCCCTTATAT  98
V  91.3% (211/231)  IGHV3-30*03  65   ...C..............C...C.G.AG.....GC.T.C..............................T............AG......  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  Y  H  G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  K  S  T  L  Y  L  
                    Query_5425   99   CATATCATGGAAGTAATAAATTCTATGCAGACTCCGTGAAGGGCCGATTTACCATCTCCAGAGACATTTCCAAGAGCACGCTATATCTGC  188
V  91.3% (211/231)  IGHV3-30*03  155  .....G...............A...........................C................A........A......G.......  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  G  Q  Y  Q  I  A  V  Q  Y  P  P  F  D  
                    Query_5425   189  AAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGTGAGAGGCCAGTACCAAATAGCAGTCCAATACCCCCCCTTTGACT  278
V  91.3% (211/231)  IGHV3-30*03  245  .............................................C.....---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (8/8)     IGHD6-19*01  5    --------------------------------------------------------------........--------------------  12
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------........  12

                                      ->                                  
                                      F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5425   279  TCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  314
J  97.7% (43/44)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_57284

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           297     7e-83
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	230	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	16	8	0	66.7
FR3-IMGT	116	229	114	107	7	0	93.9
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	207	17	0	92.4


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  D  D 
                    Query_5426   14   TCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTGATGAT  103
V  92.4% (207/224)  IGHV3-21*01  73   ..................AG................................................................AG.AG.  162
                                       S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  K  K  S  V  F  L  Q  M  N 
                    Query_5426   104  AATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCAAGAAGTCAGTGTTTCTGCAAATGAAC  193
V  92.4% (207/224)  IGHV3-21*01  163  .G..G.T....A........A.......................................G.......C...C...A.............  252
                                       S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><----------------------CDR3-IMGT--------------------->
                                       S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  G  Y  P  L  D  G  M  D  V 
                    Query_5426   194  AGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC  283
V  92.4% (207/224)  IGHV3-21*01  253  ..............G...........G.................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  100.0% (15/15)   IGHD3-22*01  11   ------------------------------------------------------...............---------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ----------------------------------------------------------------------------..............  29

                                                                       
                                       W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5426   284  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  316
J  100.0% (47/47)   IGHJ6*02     30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_306955

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCTCAG	AGTAGTACCAACTGTTATG	GGCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCAGAGTAGTACCAACTGTTATGGGCTTCTACTACTACGGTATGGACGTC	ARGLRVVPTVMGFYYYGMDV	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	240	117	108	6	3	92.3
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	228	17	3	91.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  G  G  S  F  S  T  Y  Y  W  T  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_5427   1    ACCCTGTCCCTCACCTGCACTGTCTATGGTGGGTCCTTCAGCACTTACTACTGGACCTGGATCCGCCAGACCCCAGGGAAGGGGCTGGAG  90
V  91.9% (228/248)  IGHV4-34*01  49   ..................G......................TGG...........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><-----------------------------------------------------FR3
                                       W  I  G  E  I  Y  V  G  G  G  T  T  N  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_5427   91   TGGATTGGGGAAATCTATGTTGGTGGAGGCACCACCAACTACAGCCCGTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAG  180
V  91.9% (228/248)  IGHV4-34*01  139  ...............A..CA.A.....A.....---.......A...........................A..................  225
                                       W  I  G  E  I  N  H  S  G  S  T     N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                      -IMGT------------------------------------------------------><-------------------------CDR3
                                       N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  G  L  R  V  V  P  T  V 
                    Query_5427   181  AACCAGTTCTCCCTGAACCTGAGCTCTGTGACCGCCGCGGACACGGCTATGTACTACTGCGCGAGAGGCCTCAGAGTAGTACCAACTGTT  270
V  91.9% (228/248)  IGHV4-34*01  226  .................G..............................G....T.....T........----------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                      
D  89.5% (17/19)    IGHD2-2*01   11   --------------------------------------------------------------------------..........G...C.  26

                                      -IMGT------------------------>                                 
                                       M  G  F  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5427   271  ATGGGCTTCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
D  89.5% (17/19)    IGHD2-2*01   27   ...------------------------------------------------------------  29
J  100.0% (55/55)   IGHJ6*02     8    --------.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_57285

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           293     2e-81
IGHD3-3*01                                                                                            14.1    8.4  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	215	28	0	88.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  A  S  I  S  R  Y  Y  W  N  W  I  R  Q  P  P  G  K  A  M  E  
                    Query_5428   4    CCCTGAGACTCTCCTGTAGTGTCTCTGGTGCCTCCATCAGTCGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGCAATGGAGT  93
V  88.5% (215/243)  IGHV4-59*01  50   .....TCC...A....C.C...........G..........A............G..........................G.C......  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  T  Y  H  T  G  D  T  D  Y  N  P  S  L  R  N  R  V  A  I  S  M  D  A  S  K  N  
                    Query_5428   94   GGATCGGATATACCTATCACACTGGGGACACCGACTACAACCCCTCCCTCAGGAATCGAGTCGCCATATCAATGGACGCGTCCAAGAACC  183
V  88.5% (215/243)  IGHV4-59*01  140  ....T..G....T....T...G....AG....A..................A..G.......A........G.A...A............  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V  
                    Query_5428   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACGGCTGCGGACACGGCCGTATACTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCG  273
V  88.5% (215/243)  IGHV4-59*01  230  ............................C.................G..T.............---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (7/7)     IGHD3-3*01   9    --------------------------------------------------------------------------------.......---  15

                                      ------------->                                  
                                      A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5428   274  CCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (43/43)   IGHJ4*02     6    -----...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_185984

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           283     1e-78
IGHD3-3*01                                                                                            18.0    0.57 
IGHJ4*01                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGCA	N/A	TTATTATAC	GGGGACCTATCCAC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATTATTATACGGGGACCTATCCACTTGACCAC	ARHYYTGTYPLDH	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	10	11	0	47.6
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	213	32	0	86.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  S  W  S  W  I  R  Q  F  P  G  K  G  L  E 
                    Query_5429   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTACTCCTGGAGTTGGATCCGGCAGTTCCCAGGGAAGGGACTGGAG  90
V  86.9% (213/245)  IGHV4-59*08  49   ...............................G..........A......A......C............CC...................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  R  A  H  D  M  K  T  N  Y  N  P  S  L  K  N  R  L  T  I  S  V  D  T  S  R  S 
                    Query_5429   91   TGGATTGGATATAGGGCTCACGATATGAAGACCAACTACAACCCCTCCCTCAAGAATCGACTCACCATATCAGTGGACACGTCCAGGAGC  180
V  86.9% (213/245)  IGHV4-59*08  139  ........G....TCTA.T..AG.GG..GC.........................G....G.............A..........A..A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  V  A  L  E  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  H  Y  Y  T  G  T  Y  P  L 
                    Query_5429   181  CAGGTCGCCCTGGAGTTGACCTCTGTGACCGCCGCAGACACGGCCATATATTATTGTGCGAGGCATTATTATACGGGGACCTATCCACTT  270
V  86.9% (213/245)  IGHV4-59*08  229  ...T..T.....A..C...G.........................G.G.....C........A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD3-3*01   22   -----------------------------------------------------------------.........----------------  30
J  92.5% (37/40)    IGHJ4*01     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                
                                       D  H  W  G  H  G  I  L  V  T  V  S  S
                    Query_5429   271  GACCACTGGGGCCACGGAATCCTGGTCACCGTCTCCTC  308
J  92.5% (37/40)    IGHJ4*01     9    ...T..........A....C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_185985

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           294     6e-82
IGHD3-9*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCAGGTGACCCA	TACGGTATTTTG	GCTATTGAGAAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAGGTGACCCATACGGTATTTTGGCTATTGAGAAG	AAGDPYGILAIEK	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	42	9	0	82.4
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	217	29	0	88.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  N  Y  W  S  W  I  R  Q  S  P  A  K  G 
                    Query_5430   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGCCAACTACTGGAGTTGGATCCGCCAATCCCCTGCAAAGGGC  90
V  88.2% (217/246)  IGHV4-31*03  49   .................................................GTT..........C...........GCA...A.GG......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  T  T  E  Y  N  P  S  L  K  S  R  L  T  M  S  I  D  P  S 
                    Query_5430   91   CTCGAGTGGATTGGATACATCTATTATGGTGGGACCACCGAGTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCCATTGACCCGTCT  180
V  88.2% (217/246)  IGHV4-31*03  139  ..G...........G...........CA......G....T.C...........C............G.T.....A..AG.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       T  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  A  G  D  P  Y  G  I  L 
                    Query_5430   181  ACGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGGCAGGTGACCCATACGGTATTTTG  270
V  88.2% (217/246)  IGHV4-31*03  229  .A...................C...G...........................G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  91.7% (11/12)    IGHD3-9*01   5    ------------------------------------------------------------------------------....A.......  16

                                      ----------->                                
                                       A  I  E  K  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5430   271  GCTATTGAGAAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
J  100.0% (32/32)   IGHJ4*02     15   ------------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_48130

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAGGG	AGTAGTGGTTATT	TTAGCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAGGGAGTAGTGGTTATTTTAGCCTC	ARRGSSGYFSL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  K  G  S  D  F  S  F  A  R  N
                    Query_5431   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCCGATTTCAGTTTTGCCAGGAA  90
V  94.5% (274/290)  IGHV5-51*01  6    ..........................................G..........................T.GA.A...C...A....CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  H  D  S  D  T  R  Y  S  P
                    Query_5431   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTAGAGTGGATGGGGAACATCTATCCTCATGACTCTGATACCAGATACAGCCC  180
V  94.5% (274/290)  IGHV5-51*01  96   .......................................G.............T..........GG........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  T  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_5431   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (274/290)  IGHV5-51*01  186  ...................................A.................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        M  Y  Y  C  A  R  R  G  S  S  G  Y  F  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5431   271  CATGTATTATTGTGCGAGACGAGGGAGTAGTGGTTATTTTAGCCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  94.5% (274/290)  IGHV5-51*01  276  .........C..........------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (13/13)   IGHD3-22*01  14   -------------------------.............------------------------------------------  26
J  100.0% (35/35)   IGHJ4*02     14   ---------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_294123

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           338     4e-95
IGHD1-1*01                                                                                            16.1    2.1  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	AAACA	ACAACTGG	CGC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCAGAAAACAACAACTGGCGCAC	TRKQQLAH	249	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	235	19	0	92.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  C  S  G  F  A  F  A  D  D  A  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_5432   1    GGTCCCTGAGACTCTCCTGTACATGTTCTGGATTCGCCTTTGCTGATGATGCTATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.5% (235/254)  IGHV3-49*04  47   .......................GC..........A......G....T........A.................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  A  V  I  R  S  K  N  Y  D  G  T  T  E  F  A  A  S  V  K  G  R  F  A  I  S  R  D  
                    Query_5432   91   AGTGGGTAGCCGTCATCAGAAGCAAAAATTATGATGGGACAACAGAATTTGCCGCGTCTGTGAAAGGCAGATTCGCCATCTCAAGAGATG  180
V  92.5% (235/254)  IGHV3-49*04  137  .........GTT....T.........GC.....G..............AC........................A...............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------CDR3-IMGT-----
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  K  Q  Q  L  A  
                    Query_5432   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAAGACACAGCCGTGTATTATTGTACCAGAAAACAACAACTGGCGC  270
V  92.5% (235/254)  IGHV3-49*04  227  ..............................................G.................C.....T...----------------  300
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (8/8)     IGHD1-1*01   4    -------------------------------------------------------------------------------........---  11

                                      ->                                  
                                      H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5432   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (36/36)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_138077

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5433   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_5433   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_5433   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5433   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_294121

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           311     4e-87
IGHD4-4*01                                                                                            19.9    0.15 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATCAGC	CAGTAACTAC	TCTCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCAGCCAGTAACTACTCTCGGCTAC	ARNQPVTTLGY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  T  V  S  N  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5434   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGGTCACCGTCAGTAACAACTATATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.6% (222/245)  IGHV3-53*01  47   ................................T............G......C....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  L  S  V  M  Y  S  R  G  A  T  R  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  S  S  K  
                    Query_5434   91   AGTGGCTCTCAGTCATGTATAGTCGTGGAGCCACAAGGTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  90.6% (222/245)  IGHV3-53*01  137  .....G.......T..T.....CG....TAG....TAC................A..........................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      N  T  V  Y  L  Q  M  K  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  N  Q  P  V  T  T  L  G  
                    Query_5434   181  ACACGGTGTATCTTCAAATGAAAAACCTGAGAGTCGAGGACACGGCCGTCTATTACTGTGCGAGAAATCAGCCAGTAACTACTCTCGGCT  270
V  90.6% (222/245)  IGHV3-53*01  227  .....C................C.G........C...............G...............-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (10/10)   IGHD4-4*01   7    ------------------------------------------------------------------------..........--------  16
J  97.4% (37/38)    IGHJ4*02     11   ----------------------------------------------------------------------------------------..  12

                                      ->                                  
                                      Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_5434   271  ACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.4% (37/38)    IGHJ4*02     13   .........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_294120

Length=315
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            358     3e-101
IGHD2-8*01                                                                                            12.2    29    
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	TGGTGT	GCGG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGGTGTGCGG	ASGVR	243	257	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  S  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5435  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAACAGTTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (238/247)  IGHV3-7*01  47   .............................................G.TA.........C...............................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  P  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5435  91   AGTGGGTGGCCAACATAAAGCCAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (238/247)  IGHV3-7*01  137  .....................A....................................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--CDR3-IMGT-->             
                                     K  S  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  G  V  R  W  G  Q  G  
                    Query_5435  181  AAAGCTCACTGTTTCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGTGGTGTGCGGTGGGGCCAGGGAA  270
V  96.4% (238/247)  IGHV3-7*01  227  .G.A........A.......................C..............................-----------------------  293
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD2-8*01  16   -------------------------------------------------------------------......-----------------  21
J  100.0% (34/34)   IGHJ4*02    15   -----------------------------------------------------------------------------.............  27

                                                          
                                     T  L  V  T  V  S  S  
                    Query_5435  271  CCCTGGTCACCGTCTCCTCAG  291
J  100.0% (34/34)   IGHJ4*02    28   .....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30410208


Query= Query_158364

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCCCGGCAGG	GTGGGATCTACT	TG	ACGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTC	ARHGPAGWDLLDAMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  T  I  S  C  K  G  P  G  Y  N  F  N  S  N
                    Query_5436   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGTCCTGGATACAACTTTAACAGTAA  90
V  93.1% (271/291)  IGHV5-51*01  6    ....................................C.............A................T.........G.....C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_5436   91   CTGGATCGGATGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACCAGATATAGGCC  180
V  93.1% (271/291)  IGHV5-51*01  96   .........C..................................................T.......................C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  T  A  D  K  S  T  T  T  A  Y  L  R  W  S  S  L  K  A  S  D  P  A
                    Query_5436   181  GTCCTTCCAAGGCCACGTCACCATTACAGCCGACAAGTCCACCACCACCGCCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACCCCGC  270
V  93.1% (271/291)  IGHV5-51*01  186  ...............G........CT...............T..G..............A.........................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        T  Y  Y  C  A  R  H  G  P  A  G  W  D  L  L  D  A  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_5436   271  CACTTATTACTGTGCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  93.1% (271/291)  IGHV5-51*01  276  ..TG.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD1-26*01  7    ---------------------------------......G.....---------------------------------------------  18
J  97.9% (46/47)    IGHJ6*02     16   -----------------------------------------------...G.......................................  58

                                          
                                        S 
                    Query_5436   361  CTCA  364
J  97.9% (46/47)    IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_294126

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           304     1e-84
IGHD3-16*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	221	27	0	89.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_5437   4    CCCTGAGACTCTCCTGTACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  89.1% (221/248)  IGHV4-61*01  50   .....TCC...A....C.....C.................C....G.AG.T..........C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S  
                    Query_5437   94   TGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCCA  183
V  89.1% (221/248)  IGHV4-61*01  140  ...A.........GT............G......CAC..A.........................G.CA....A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y  
                    Query_5437   184  AAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTATC  273
V  89.1% (221/248)  IGHV4-61*01  230  .G................A.................................G...............----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-16*02  24   ------------------------------------------------------------------------------------......  29

                                      ---------------->                                  
                                      R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_5437   274  GTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  324
D  100.0% (7/7)     IGHD3-16*02  30   .--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    -.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_158366

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            347     7e-98
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AACCT	ATAGTAGTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACCTATAGTAGTGGCCCCTTTGTCTAC	ATYSSGPFVY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	233	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  D  F  T  F  T  I  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5438   1    GGTCCCTGAGACTCTCTTGTGCAGCCTCTGACTTCACGTTTACTATCTATTGGATGACCTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.5% (233/244)  IGHV3-7*01   47   ................C.............GA.....C....G..G...........G.....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  T  N  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5438   91   AGTGGGTGGCCAACACAAACCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.5% (233/244)  IGHV3-7*01   137  ...............T...G......................................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  Y  S  S  G  P  F  V  
                    Query_5438   181  AGAACTCACTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAACCTATAGTAGTGGCCCCTTTGTCT  270
V  95.5% (233/244)  IGHV3-7*01   227  ................G...............................................--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD3-22*01  12   ---------------------------------------------------------------------..........-----------  21
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------.....A..  12

                                      ->                                  
                                      Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_5438   271  ACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  306
J  95.5% (42/44)    IGHJ4*02     13   ..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_294124

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           333     1e-93
IGHD2-15*01                                                                                           31.5    5e-05
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GAGAGTTC	TTGTACTGGTGGTAGGTGCTAC	ATGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAGAGTTCTTGTACTGGTGGTAGGTGCTACATGTTCTACTACTACGCTGTGGACGTC	AESSCTGGRCYMFYYYAVDV	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	248	3	3	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  N  V  S  G  V  S  I  S  T  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_5439   4    CCCTGAGACTCTCCTGCAATGTCTCTGGTGTCTCCATCAGTACTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  93.5% (229/245)  IGHV4-39*01  50   .....TCC...A......C...........G.........C.G..G..........................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  M  G  S  I  Y  H  S  G  S  A  F  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  T  S  
                    Query_5439   94   TGGAGTGGATGGGGAGTATCTATCATAGTGGGAGCGCCTTCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCCGTAGACACGTCCA  183
V  93.5% (229/245)  IGHV4-39*01  140  ..........T............T...........A...A................A................A................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  E  S  S  C  T  G  G  R  
                    Query_5439   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGGAGAGTTCTTGTACTGGTGGTAGGT  273
V  93.5% (229/245)  IGHV4-39*01  230  .................................................................-------------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  90.9% (20/22)    IGHD2-15*01  7    -------------------------------------------------------------------------.....G.........C.  23

                                      R3-IMGT------------------------>                                 
                                      C  Y  M  F  Y  Y  Y  A  V  D  V  W  G  Q  G  T  T  I  T  V  S  S 
                    Query_5439   274  GCTACATGTTCTACTACTACGCTGTGGACGTCTGGGGCCAAGGGACCACGATCACCGTCTCCTCA  338
D  90.9% (20/22)    IGHD2-15*01  24   .....------------------------------------------------------------  28
J  94.5% (52/55)    IGHJ6*02     8    ----------...........G.A..........................G..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_158368

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_5440   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_5440   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_5440   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_5440   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_46672

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           389     2e-110
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GGGACT	AGGATATTGTCGTGGTACC	GACTGCAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGGACTAGGATATTGTCGTGGTACCGACTGCACCTACTACGGTTTGGACGTC	ARGLGYCRGTDCTYYGLDV	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	70	1	0	98.6
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	296	5	4	1	0	80
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  S  F  S  D  
                    Query_5441   8    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCAGTTTCAGCGACG  97
V  93.1% (269/289)  IGHV1-69*01  5    ...................G..........................................................CC......AG.T  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      D  A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  L  I  P  I  F  G  I  L  N  Y  A  
                    Query_5441   98   ATGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCCTCATCCCTATCTTTGGTATATTAAACTACGCAC  187
V  93.1% (269/289)  IGHV1-69*01  95   .........G.............................................GA..................C.GC...........  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  R  V  T  I  S  V  D  E  S  T  S  T  T  Y  M  E  L  S  S  L  R  S  D  D  T  
                    Query_5441   188  AGAAATTCCAGGGCAGAGTCACGATTTCCGTGGACGAGTCCACGAGCACAACCTACATGGAGCTGAGCAGCCTGAGATCTGACGACACGG  277
V  93.1% (269/289)  IGHV1-69*01  185  ....G.....................A...C......A............G...............................G.......  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-----------------------CDR3-IMGT----------------------->                   
                                      A  V  Y  F  C  A  R  G  L  G  Y  C  R  G  T  D  C  T  Y  Y  G  L  D  V  W  G  Q  G  T  T  
                    Query_5441   278  CCGTGTATTTCTGTGCAAGGGGACTAGGATATTGTCGTGGTACCGACTGCACCTACTACGGTTTGGACGTCTGGGGCCAGGGGACCACGG  367
V  93.1% (269/289)  IGHV1-69*01  275  .........A......G..-----------------------------------------------------------------------  293
                                      A  V  Y  Y  C  A                                                                          
D  89.5% (17/19)    IGHD2-2*01   1    -------------------------..........A..A.....----------------------------------------------  19
J  94.2% (49/52)    IGHJ6*02     11   ----------------------------------------------------..........A................A..........  48

                                                    
                                      V  I  V  S  S 
                    Query_5441   368  TCATCGTCTCCTCA  381
J  94.2% (49/52)    IGHJ6*02     49   ...C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_265424

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           43.0    2e-08
IGHJ3*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TATCACTGC	TTACTATGATAGTAGTGGTTAT	A	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATATCACTGCTTACTATGATAGTAGTGGTTATAATGCTTTTGATATC	VRDITAYYDSSGYNAFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  L  R  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5442   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCCTTAGGAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ...................................A..T....C.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  D  S  S  V  S  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5442   91   AGTGGGTCTCAGGTATTAGTGATAGTAGTGTTAGTACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATTTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  ............C........G....G...G...C...T..................................C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  V  Q  M  N  R  M  R  A  E  D  T  A  V  Y  Y  C  V  R  D  I  T  A  Y  Y  D  
                    Query_5442   181  AGAACACGCTGTATGTGCAAATGAACAGAATGAGAGCCGAGGACACGGCCGTATATTACTGTGTGAGAGATATCACTGCTTACTATGATA  270
V  93.6% (234/250)  IGHV3-23*01  227  ..............C.............CC.................................C..A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (22/22)   IGHD3-22*01  4    -------------------------------------------------------------------------------...........  14

                                      IMGT--------------------->                                  
                                      S  S  G  Y  N  A  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5442   271  GTAGTGGTTATAATGCTTTTGATATCTGGGGCCAAGGGACATTGGTCACCGTCTCTTCAG  330
D  100.0% (22/22)   IGHD3-22*01  15   ...........-------------------------------------------------  25
J  97.9% (47/48)    IGHJ3*02     3    ------------.............................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_46670

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           355     3e-100
IGHD3-22*01                                                                                           18.0    0.62  
IGHJ2*01                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTCAAACATT	TGATAGTGGTGCTTA	CGAGTTCCAGGACCCT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTCAAACATTTGATAGTGGTGCTTACGAGTTCCAGGACCCTTACTGGTACTTCGATCTC	AKVQTFDSGAYEFQDPYWYFDL	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  I  Y  D  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5443   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAATCTATGACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-23*01  47   ...........................................C.G.....C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  A  S  A  I  S  G  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5443   91   AGTGGGCCTCAGCTATCAGTGGGAGTGGTGGTACCACATATTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.6% (238/249)  IGHV3-23*01  137  ......T.........T.....T..........G......C.................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  V  Q  T  F  D  S  G  
                    Query_5443   181  AGAACACGCTGTATCTACAGATGAACAGCCTGAGGGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTTCAAACATTTGATAGTGGTG  270
V  95.6% (238/249)  IGHV3-23*01  227  ................G..A..............A..................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  86.7% (13/15)    IGHD3-22*01  10   -------------------------------------------------------------------------------.......A...  20

                                      -CDR3-IMGT--------------------------->                                  
                                      A  Y  E  F  Q  D  P  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  F  S  S  
                    Query_5443   271  CTTACGAGTTCCAGGACCCTTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTTTCTCCTCAG  342
D  86.7% (13/15)    IGHD3-22*01  21   G...--------------------------------------------------------------------  24
J  98.1% (51/52)    IGHJ2*01     2    --------------------..........................................G.........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_46676

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           343     2e-96
IGHD2-8*02                                                                                            12.2    30   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTGGGCCGTTGGCC	TACTGG	GTCT	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  T  N  H  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5444   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCGTCAGTACCAACCACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (233/247)  IGHV3-53*01  47   ...............................G.............G....T......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  I  I  F  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  K  
                    Query_5444   91   AGTGGGTCTCAATTATTTTTAGTGGTGGAAGTACATACTACGCAGACTCCGTGAAGGGCCGATTCTCCATCTCCAGAGACAATTCCAAAA  180
V  94.3% (233/247)  IGHV3-53*01  137  ...........G......A...C.....T..C.................................A......................G.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT---------------------------------------------------->                               
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  M  Y  Y  C  A  R  D  W  A  V  G  L  L  G  
                    Query_5444   181  ACACACTATATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATGTATTACTGTGCGAGAGATTGGGCCGTTGGCCTACTGGGTC  270
V  94.3% (233/247)  IGHV3-53*01  227  ....G..G.......................................G...................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (6/6)     IGHD2-8*02   10   ---------------------------------------------------------------------------------......---  15

                                                                       
                                      L  G  Q  G  T  L  V  T  V  S  S  
                    Query_5444   271  TGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (32/32)   IGHJ4*02     17   -................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_265420

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           262     4e-72
IGHD2-15*01                                                                                           10.3    120  
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	ACATAATCCT	GCTGC	CAGAGGGGC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGACATAATCCTGCTGCCAGAGGGGCCAACTGGTTCGACCTC	ARGHNPAARGANWFDL	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	48	24	19	2	3	79.2
FR2-IMGT	49	99	51	45	6	0	88.2
CDR2-IMGT	100	120	21	18	3	0	85.7
FR3-IMGT	121	234	114	95	19	0	83.3
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	245	208	34	3	84.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  D  F  Y  G  G  S  F     D  S  Y  W  N  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_5445   1    ACCCTGTCCCTCACCTGCGATTTTTATGGTGGGTCCTT---TGATTCCTACTGGAATTGGATCCGCCAGACTCCAGGGAAGGGGCTGGAG  87
V  84.9% (208/245)  IGHV4-34*01  49   ...................C.G.C..............CAG..G..A........GC............C.C..................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  N  R  A  G  S  T  N  F  N  P  S  L  E  S  R  L  T  I  S  V  D  T  S  T  K 
                    Query_5445   88   TGGATTGCAGAAATCAATCGTGCTGGAAGCACCAACTTCAATCCGTCCCTCGAGAGTCGACTCACCATTTCAGTGGACACGTCCACGAAG  177
V  84.9% (208/245)  IGHV4-34*01  139  .......GG..........A.AG..............A...C.........A........G.......A.....A..........A...C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       R  F  S  L  R  L  N  S  L  N  A  A  D  T  G  V  Y  Y  C  A  R  G  H  N  P  A  A  R  G  A 
                    Query_5445   178  CGATTCTCCCTGAGGCTAAATTCTCTTAACGCCGCAGACACGGGTGTGTATTACTGTGCGCGAGGACATAATCCTGCTGCCAGAGGGGCC  267
V  84.9% (208/245)  IGHV4-34*01  229  .AG..........A...G.GC...G.G.C......G.......C................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (5/5)     IGHD2-15*01  21   ---------------------------------------------------------------------------.....----------  25
J  96.0% (48/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  D  L  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_5445   268  AACTGGTTCGACCTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  316
J  96.0% (48/50)    IGHJ5*02     3    .............C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_46674

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           316     2e-88
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGCTCCCCCCTCAC	TATATCAATGGCTGG	GACT	TTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGCTCCCCCCTCACTATATCAATGGCTGGGACTTTTGGCTTC	ACSPLTISMAGTFGF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	221	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  T  P  G  K  E  L  E 
                    Query_5446   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATAAGTAGTTATTACTGGAACTGGATCCGGCAGACCCCAGGGAAGGAACTGGAG  90
V  92.1% (221/240)  IGHV4-59*08  49   ......................................C........C.......G.............C............G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  T  G  S  A  N  Y  N  P  S  L  K  S  R  V  S  M  S  V  D  S  S  K  N 
                    Query_5446   91   TGGATTGGGTATGTCTATTACACTGGGAGCGCCAACTACAACCCCTCCCTCAAGAGTCGAGTCAGCATGTCGGTGGACTCGTCCAAGAAT  180
V  92.1% (221/240)  IGHV4-59*08  139  ............A.........G.......A.................................C...A..A..A...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  S  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  C  S  P  L  T  I  S  M  A  G 
                    Query_5446   181  CAGTTCTCCCTGAGTCTGAGTTCTGTGACCGCCGCAGACACGGCCATCTATTACTGTGCGTGCTCCCCCCTCACTATATCAATGGCTGGG  270
V  92.1% (221/240)  IGHV4-59*08  229  .............AG.....C........................G.G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  86.7% (13/15)    IGHD6-19*01  4    --------------------------------------------------------------------------....G..G.......-  18

                                      ----------->                                  
                                       T  F  G  F  W  G  Q  G  S  L  V  R  V  S  S  
                    Query_5446   271  ACTTTTGGCTTCTGGGGCCAGGGATCCCTGGTCCGCGTCTCCTCAG  316
J  88.4% (38/43)    IGHJ4*02     6    ---....A..A.............A........AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_48131

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            350     8e-99
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AACCT	ATAGTAGTGG	CAC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACCTATAGTAGTGGCACCTTTGTCTAC	ATYSSGTFVY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  D  F  T  F  T  I  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5447   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGACTTCACGTTTACTATCTATTGGATGACCTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.9% (234/244)  IGHV3-7*01   47   ..............................GA.....C....G..G...........G.....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  T  N  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5447   91   AGTGGGTGGCCAACACAAACCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.9% (234/244)  IGHV3-7*01   137  ...............T...G......................................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  Y  S  S  G  T  F  V  
                    Query_5447   181  AGAACTCACTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAACCTATAGTAGTGGCACCTTTGTCT  270
V  95.9% (234/244)  IGHV3-7*01   227  ................G...............................................--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD3-22*01  12   ---------------------------------------------------------------------..........-----------  21
J  93.2% (41/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------.....A..  12

                                      ->                                  
                                      Y  W  G  Q  G  C  L  V  T  V  S  S  
                    Query_5447   271  ACTGGGGCCAGGGATGCCTGGTCACCGTCTCCTCAG  306
J  93.2% (41/44)    IGHJ4*02     13   ..............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_299069

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD3-16*01                                                                                           12.2    36    
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTTGAGG	GATTAC	CAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTAC	ARSLRDYQPFYFDY	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	280	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  N  F  N  
                    Query_5448   2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGACAATCTCCTGTAAGGGTTCTGGATACAACTTTAACA  91
V  95.6% (280/293)  IGHV5-51*03  2    ..G...................................................AG.........................G.....C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  N  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_5448   92   GTAACTGGATCGGATGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACCAGATATA  181
V  95.6% (280/293)  IGHV5-51*03  92   .CT..........C..................................................T.......................C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  P  S  F  Q  G  Q  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_5448   182  GGCCGTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  95.6% (280/293)  IGHV5-51*03  182  .C........................A...............................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  A  R  S  L  R  D  Y  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  
                    Query_5448   272  CTGCCATGTATTACTGTGCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCT  361
V  95.6% (280/293)  IGHV5-51*03  272  .C.....................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD3-16*01  8    --------------------------------......----------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ----------------------------------------------....................A.......................  45

                                         
                                      S  
                    Query_5448   362  CAG  364
J  97.9% (46/47)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_281292

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           310     1e-86
IGHD3-3*01                                                                                            16.1    2.3  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCGATG	ACGATTTT	N/A	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCGATGACGATTTTTGGTTTGACCAC	ARSDDDFWFDH	261	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	18	6	0	75
FR2-IMGT	75	125	51	45	6	0	88.2
CDR2-IMGT	126	146	21	15	6	0	71.4
FR3-IMGT	147	260	114	100	14	0	87.7
CDR3-IMGT (germline)	261	266	6	6	0	0	100
Total	N/A	N/A	266	232	34	0	87.2


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  F  L  T  C  T  V  S  G  A  P  I  T  H  Y  Y  W  S  *  I  R  
                    Query_5449   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTTCCTCACCTGCACTGTCTCTGGTGCCCCCATCACTCATTATTACTGGAGCTAGATCCGGC  90
V  87.2% (232/266)  IGHV4-59*08  26   ................T.............C.......................G.T......G.AG...C..........G........  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  S  P  G  K  G  L  E  W  V  A  Y  I  D  D  R  G  T  T  S  Y  I  P  S  L  K  S  R  V  T  
                    Query_5449   91   AGTCCCCAGGGAAGGGACTGGAGTGGGTAGCATATATTGACGACAGAGGGACCACCAGCTACATTCCCTCCCTCAAGAGTCGAGTCACCA  180
V  87.2% (232/266)  IGHV4-59*08  116  ..C.......................A.T.GG.....CT.TT....T....G.....A.....AC.........................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  I  D  T  S  R  Y  Q  I  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  S  
                    Query_5449   181  TATCGATCGACACGTCCAGGTACCAGATCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCATTTATTTTTGTGCGAGAAGCG  270
V  87.2% (232/266)  IGHV4-59*08  206  ....AG.A..........A.A.....T...........C.............................G.G....AC.........----  291
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      --CDR3-IMGT----------->                                  
                                      D  D  D  F  W  F  D  H  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_5449   271  ATGACGATTTTTGGTTTGACCACTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  327
D  100.0% (8/8)     IGHD3-3*01   6    ---........----------------------------------------------  13
J  93.5% (43/46)    IGHJ5*02     6    -----------.....C....C.................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_281291

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           434     4e-124
IGHD2-2*01                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	CGGGACGC	TGTAGTAGTAGCAGCTGC	CAGGCGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGCGGGACGCTGTAGTAGTAGCAGCTGCCAGGCGCACTACTACGGTATGGACGTC	AGAGRCSSSSCQAHYYGMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	284	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_5450   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCATGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  97.9% (284/290)  IGHV1-69*06  6    ..................G......................................C................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  T  F  G  T  A  N  Y  A  Q
                    Query_5450   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTACCTTTGGCACAGCAAACTACGCACA  180
V  97.9% (284/290)  IGHV1-69*06  96   .................................................................T......T.................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  G  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_5450   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGGCAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  97.9% (284/290)  IGHV1-69*06  186  ................................A.........................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        V  Y  Y  C  A  G  A  G  R  C  S  S  S  S  C  Q  A  H  Y  Y  G  M  D  V  W  G  Q  G  T  T
                    Query_5450   271  CGTGTATTACTGTGCGGGAGCGGGACGCTGTAGTAGTAGCAGCTGCCAGGCGCACTACTACGGTATGGACGTCTGGGGCCAAGGAACCAC  360
V  97.9% (284/290)  IGHV1-69*06  276  ................A...----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  94.4% (17/18)    IGHD2-2*01   8    ----------------------------..........C.......--------------------------------------------  25
J  98.1% (52/53)    IGHJ6*02     10   -----------------------------------------------------...............................G.....  46

                                                      
                                        V  T  V  S  S 
                    Query_5450   361  GGTCACCGTCTCCTCA  376
J  98.1% (52/53)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_281290

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           296     2e-82
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GACTAGTGA	GATAGTAGTG	CTTGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGACTAGTGAGATAGTAGTGCTTGGTGCTTTCGATATG	ARETSEIVVLGAFDM	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	217	28	0	88.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  R  S  H  S  W  S  W  I  R  Q  P  P  G  K  G  M  E 
                    Query_5451   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGAGACTCCATCAGAAGTCATTCGTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGAATGGAG  90
V  88.6% (217/245)  IGHV4-59*01  49   ...................C.........T.G.........T...T.C.AC.......................A.........C.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  V  E  Y  R  G  G  S  N  Y  N  P  S  L  N  S  R  L  T  I  S  V  D  M  S  K  N 
                    Query_5451   91   TGGATTGGAAATGTCGAATACAGGGGAGGCTCCAACTACAACCCCTCCCTCAACAGTCGACTCACCATATCAGTGGACATGTCCAAGAAT  180
V  88.6% (217/245)  IGHV4-59*01  139  ........GT..A..T.T.....T..GA..A......................G......G.............A....C.........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  T  S  E  I  V  V  L  G 
                    Query_5451   181  CAGTTCTCCCTGAAGCTGAGCAGTGTGACCGCGGCGGACACGGCCGTCTATTACTGTGCGAGAGAGACTAGTGAGATAGTAGTGCTTGGT  270
V  88.6% (217/245)  IGHV4-59*01  229  .....................TC.........T..............G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  11   --------------------------------------------------------------------------..........------  20
J  95.6% (43/45)    IGHJ3*02     4    -----------------------------------------------------------------------------------------.  4

                                      ----------->                                
                                       A  F  D  M  W  G  Q  G  T  M  V  T  V  S  S
                    Query_5451   271  GCTTTCGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  314
J  95.6% (43/45)    IGHJ3*02     5    .....T.....C................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_281297

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD3-3*01                                                                                            10.3    115   
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGCGGAAA	GATTT	C	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGCGGAAAGATTTCCTACTTTGACTAC	ARRGKISYFDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	235	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  H  G  S  I  S  G  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_5452   1    ACCCTGTCCCTCACCTGCACTGTCTCTCATGGCTCCATCAGTGGTTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  96.7% (235/243)  IGHV4-59*01  49   ...........................GG.............A...A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  G  T  M  S  V  D  T  S  K  N 
                    Query_5452   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGGCACCATGTCAGTAGACACGTCCAAGAAC  180
V  96.7% (235/243)  IGHV4-59*01  139  .............................................................T......A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  K  I  S  Y  F  D  Y 
                    Query_5452   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGACGCGGAAAGATTTCCTACTTTGACTAC  270
V  96.7% (235/243)  IGHV4-59*01  229  ...................G...........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-3*01   8    -----------------------------------------------------------------------.....--------------  12
J  97.9% (46/47)    IGHJ4*02     2    -----------------------------------------------------------------------------.............  14

                                                                        
                                       W  G  L  G  T  L  V  T  V  S  S  
                    Query_5452   271  TGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  304
J  97.9% (46/47)    IGHJ4*02     15   .......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_281296

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	243	5	0	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5453   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  98.0% (243/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_5453   91   CTGGAGTGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.0% (243/248)  IGHV4-31*03  139  ...............T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_5453   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  98.0% (243/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  98.0% (50/51)    IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5453   271  GACCCCTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  310
J  98.0% (50/51)    IGHJ5*02     12   .................A......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_281294

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCGGCCGG	TTGTGGTAGTACCGGCTGCTATG	GAAAT	AACCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCGGCCGGTTGTGGTAGTACCGGCTGCTATGGAAATAACCGGTTCGACCCC	AREAAGCGSTGCYGNNRFDP	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E  
                    Query_5454   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGCGACTGGAGC  93
V  93.0% (227/244)  IGHV4-59*01  50   .....TCC...A................................T...................................G........T  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      R  I  G  Y  I  H  Y  S  G  S  T  D  H  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_5454   94   GGATTGGGTATATCCATTACAGTGGGAGCACCGACCACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTTGACACGTCCAAGAACC  183
V  93.0% (227/244)  IGHV4-59*01  140  ..............T.................A..T...............................A.....A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      Q  I  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  A  G  C  G  S  T  G  
                    Query_5454   184  AGATCTCCCTGAAGGTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGAAGCGGCCGGTTGTGGTAGTACCGGCT  273
V  93.0% (227/244)  IGHV4-59*01  230  ..T...........C...G...........................G.....C...........--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  91.3% (21/23)    IGHD2-2*01   7    -------------------------------------------------------------------------....A........A...  23

                                      T------------------------>                                  
                                      C  Y  G  N  N  R  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5454   274  GCTATGGAAATAACCGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  91.3% (21/23)    IGHD2-2*01   24   ......------------------------------------------------------  29
J  98.0% (48/49)    IGHJ5*02     3    -----------...T.............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_65010

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           321     6e-90
IGHD3-16*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	GGTGGAAATTA	TTTGGGG	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGTGGAAATTATTTGGGGGGTATGGACGTC	AGGNYLGGMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  Y  Y  T  M  Y  W  V  R  Q  V  P  G  R  G  L  
                    Query_5455   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATTATTATACCATGTACTGGGTCCGTCAAGTTCCGGGGAGGGGTCTGG  90
V  91.8% (225/245)  IGHV3-43*01  47   ............................................G...........C...............C........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  I  S  W  D  G  E  T  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  G  
                    Query_5455   91   AGTGGGTCTCTCTTATTAGTTGGGATGGTGAGACTACAGACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACACCGGCA  180
V  91.8% (225/245)  IGHV3-43*01  137  ..............................GT.GC...T.............................................A.A...  226
                                      E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  R  S  L  F  L  Q  M  N  S  L  I  S  E  D  T  A  L  Y  Y  C  A  G  G  N  Y  L  G  G  M  
                    Query_5455   181  AAAGGTCCCTCTTTCTGCAGATGAACAGTCTGATAAGTGAAGACACCGCCTTATATTACTGTGCAGGTGGAAATTATTTGGGGGGTATGG  270
V  91.8% (225/245)  IGHV3-43*01  227  ...AC.....G.A......A.............G..C...G...........G............-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  15   ----------------------------------------------------------------------------.......-------  21
J  97.8% (44/45)    IGHJ6*02     18   -----------------------------------------------------------------------------------.......  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5455   271  ACGTCTGGGGCCAAGGGACAACGGTCACCGTCTCCTCA  308
J  97.8% (44/45)    IGHJ6*02     25   ...................C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_299060

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           406     1e-115
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	71	0	0	100
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	104	10	0	91.2
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  
                    Query_5456   7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCT  96
V  94.8% (275/290)  IGHV5-51*03  5    ..............................................................................G...........  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  
                    Query_5456   97   ACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCC  186
V  94.8% (275/290)  IGHV5-51*03  95   .........G.......................A...................................A....G.....A.........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  P  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  R  A  A  D  P  
                    Query_5456   187  CGTCCTTCCAAGGCCAGGTCCCCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCGGGCCGCGGACCCCG  276
V  94.8% (275/290)  IGHV5-51*03  185  ....................A.........................C...........G...............AA....T.....A...  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------CDR3-IMGT----------------->                               
                                      A  V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_5456   277  CCGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  366
V  94.8% (275/290)  IGHV5-51*03  275  ..A.G...............----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (12/12)   IGHD6-19*01  5    -----------------------............-------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ---------------------------------------------.............................................  45

                                         
                                      S  
                    Query_5456   367  CAG  369
J  100.0% (48/48)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_299063

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         353     9e-100
IGHD3-3*02                                                                                            12.2    31    
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-3*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	CTC	AGCATT	GGACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGACTCAGCATTGGACGACTACTTTGACTGC	AGDSALDDYFDC	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  L  I  F  S  A  H  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5457     1    GGTCCCTGAGACTCTCCTGTGCTGCCTCGGGACTCATCTTCAGTGCCCATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-30-3*01  47   ......................A.....T...T...C.......AG.T..........................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  V  N  S  
                    Query_5457     91   AGTGGGTGGCGGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGTCAATTCCG  180
V  95.2% (238/250)  IGHV3-30-3*01  137  ..........A......................................................................A.......A  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                        E  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  G  D  S  A  L  D  D  Y  
                    Query_5457     181  AGAACACGCTCTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGGGAGACTCAGCATTGGACGACTACT  270
V  95.2% (238/250)  IGHV3-30-3*01  227  ..........G......................................................A....--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-3*02     6    -------------------------------------------------------------------------......-----------  11
J  97.9% (47/48)    IGHJ4*02       1    ------------------------------------------------------------------------------------......  6

                                        ------->                                  
                                        F  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5457     271  TTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.9% (47/48)    IGHJ4*02       7    ......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_299062

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           335     4e-94
IGHD3-10*01                                                                                           12.2    35   
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTAAATTGGGAATCCGGGGG	GGTGCGGGG	GTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTAAATTGGGAATCCGGGGGGGTGCGGGGGTTTTTGACCAC	ATKLGIRGGAGVFDH	280	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	69	6	0	92
CDR1-IMGT	76	90	24	9	6	9	37.5
FR2-IMGT	91	141	51	48	3	0	94.1
CDR2-IMGT	142	165	24	19	5	0	79.2
FR3-IMGT	166	279	114	106	8	0	93
CDR3-IMGT (germline)	280	283	4	4	0	0	100
Total	N/A	N/A	292	255	28	9	87.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  Q  P  G  S  S  V  K  V  S  C  K  A  S  S           T 
                    Query_5458   1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGCAGCCTGGGTCCTCGGTGAAGGTTTCCTGCAAGGCCAGTAGT---------ACC  81
V  87.3% (255/292)  IGHV1-69*01  1    .......................G............A......................C...........TTC.G.AGGCACCTTC.G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  F  I  S  W  V  R  L  A  P  G  Q  G  L  E  W  M  G  G  I  T  P  M  F  G  T  T  N  Y 
                    Query_5458   82   AGTTATTTTATCAGCTGGGTGCGACTGGCCCCTGGACAAGGCCTTGAGTGGATGGGAGGCATCACCCCTATGTTTGGAACAACTAACTAC  171
V  87.3% (255/292)  IGHV1-69*01  91   ..C...GC.................A...............G.................G....T......C.....T...G.A......  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  A  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  G  D 
                    Query_5458   172  GCACAGAAGTTTCAGGGCAGAGTCGCGATTACCGCGGACGAATCTACGAGCACCGCCTACATGGAGTTGAGCAGCCTGAGATCTGGGGAC  261
V  87.3% (255/292)  IGHV1-69*01  181  ...........C............A...................C........A............C..................A....  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  T  K  L  G  I  R  G  G  A  G  V  F  D  H  W  G  Q  G  T  P  V  T  V 
                    Query_5458   262  ACGGCCGTATATTATTGTGCGACTAAATTGGGAATCCGGGGGGGTGCGGGGGTTTTTGACCACTGGGGCCAGGGAACCCCAGTCACCGTC  351
V  87.3% (255/292)  IGHV1-69*01  271  ........G.....C.......--------------------------------------------------------------------  292
                                       T  A  V  Y  Y  C  A                                                                      
D  88.9% (8/9)      IGHD3-10*01  11   ------------------------------------------...T.....---------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ------------------------------------------------------......T..................TG.........  41

                                             
                                       S  A  
                    Query_5458   352  TCCGCAG  358
J  90.7% (39/43)    IGHJ4*02     42   ...T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_65014

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            329     3e-92
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ3*02                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	GTCAGCGTACTGG	TATTGTTCGGG	CCGCCCCCTACGCTGGTCC	TGAGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAGTCAGCGTACTGGTATTGTTCGGGCCGCCCCCTACGCTGGTCCTGAGATT	AKDSQRTGIVRAAPYAGPEI	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	252	10	9	1	0	90
Total	N/A	N/A	252	231	21	0	91.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  F  T  F  K  L  Y  A  M  H  W  V  R  L  A  P  G  K  G  L  
                    Query_5459   1    GGTCCCTGAGACTCTCCTGTGAAGGCTCTGGATTCACCTTTAAACTGTATGCCATGCACTGGGTCCGGCTAGCTCCAGGGAAGGGCCTGG  90
V  91.7% (231/252)  IGHV3-9*01   47   .....................C..C................G.TGAT......................A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  W  N  S  A  S  M  G  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_5459   91   AGTGGGTCTCAAGTATTAGTTGGAATAGTGCTAGCATGGGCTATGCGGACTCTGTGAAGGGCCGATTCACCGTTTCCAGAGACAACGCCA  180
V  91.7% (231/252)  IGHV3-9*01   137  ...........G..................G......A.................................A.C................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  V  E  D  T  A  F  Y  Y  C  A  K  D  S  Q  R  T  G  I  
                    Query_5459   181  AGAACTCCGTGTATTTACAAATGAACAGTCTCAGAGTTGAGGACACGGCCTTCTACTACTGTGCGAAAGATAGTCAGCGTACTGGTATTG  270
V  91.7% (231/252)  IGHV3-9*01   227  ........C.....C.G..............G....C...............G..T........A.......------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  90.9% (10/11)    IGHD3-10*01  8    -------------------------------------------------------------------------------------...G.  12

                                      R3-IMGT------------------------>                                  
                                      V  R  A  A  P  Y  A  G  P  E  I  W  G  Q  G  T  M  V  S  V  T  S  
                    Query_5459   271  TTCGGGCCGCCCCCTACGCTGGTCCTGAGATTTGGGGCCAAGGGACAATGGTCAGCGTCACTTCAG  336
D  90.9% (10/11)    IGHD3-10*01  13   ......------------------------------------------------------------  18
J  90.2% (37/41)    IGHJ3*02     10   -------------------------...T..C......................C....T......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_65015

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           23.8    0.011
IGHJ2*01                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAT	TATTTCCATGATAGTCGTGGT	G	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCATTATTTCCATGATAGTCGTGGTGACTGGTACTTCGATCTC	ARDHYFHDSRGDWYFDL	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  H  D  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5460   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTCACGACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-53*01  47   ............................................AG.A..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  H  R  D  G  K  T  D  Y  A  V  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_5460   91   AGTGGGTCTCAGTTATTCATAGGGATGGAAAAACAGACTATGCAGTCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.9% (232/247)  IGHV3-53*01  137  .................T....C.G...T.GC...T....C....A............................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------------CDR3-IMGT-
                                      N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  H  Y  F  H  D  S  R  
                    Query_5460   181  ACACTGTGTATCTTCAAATGAACAGCCTGCGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGACCATTATTTCCATGATAGTCGTG  270
V  93.9% (232/247)  IGHV3-53*01  227  ....GC.......................A.....................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  85.7% (18/21)    IGHD3-22*01  2    -----------------------------------------------------------------------....A.T........A...  20

                                      ------------------->                                  
                                      G  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_5460   271  GTGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  85.7% (18/21)    IGHD3-22*01  21   ..----------------------------------------------------  22
J  100.0% (51/51)   IGHJ2*01     3    ---...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_299067

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           318     6e-89
IGHD2-21*02                                                                                           18.0    0.58 
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAGTCTGGGCCA	GGTGGTGAC	A	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGAGTCTGGGCCAGGTGGTGACATCGACCTC	ARHESGPGGDIDL	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	227	24	0	90.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  A  H  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_5461   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTGCTCACTACTGGGGCTGGATCCGCCAGCCCCCCGGGAAGGGG  90
V  90.4% (227/251)  IGHV4-39*01  49   ................................................AG.T............................A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  I  I  Y  H  N  T  S  L  K  S  R  V  A  M  S  V  D  T  S 
                    Query_5461   91   CTGGAGTGGATTGGCAGTATATATTATAGTGGGATCATCTACCACAACACGTCCCTCAAGAGTCGAGTCGCCATGTCTGTTGACACGTCC  180
V  90.4% (227/251)  IGHV4-39*01  139  ..............G.....C.............G..C....T.....C....................A....A..C..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  L  L  S  L  N  L  D  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  H  E  S  G  P  G  G 
                    Query_5461   181  AAGAACTTGCTCTCCCTGAACCTGGACTCCGTGACCGCCGCAGACACGGCTCTATATTATTGTGCGAGACATGAGTCTGGGCCAGGTGGT  270
V  90.4% (227/251)  IGHV4-39*01  229  ......CA.T..........G...AG...T.....................G.G.....C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD2-21*02  11   ------------------------------------------------------------------------------------......  16

                                      ----------->                                  
                                       D  I  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5461   271  GACATCGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (9/9)     IGHD2-21*02  17   ...-------------------------------------------  19
J  97.6% (41/42)    IGHJ5*02     10   ----......C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_65017

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           389     2e-110
IGHD4-17*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCTAGAGGG	GACTACGGTG	GTAACTCCCTGGGGGTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCTAGAGGGGACTACGGTGGTAACTCCCTGGGGGTATGACTAC	ARALEGTTVVTPWGYDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	249	0	0	100


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                     Query_5462   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  100.0% (249/249)  IGHV3-48*03  47   ..........................................................................................  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                     Query_5462   91   AGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  100.0% (249/249)  IGHV3-48*03  137  ..........................................................................................  226
                                       E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                       -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  L  E  G  T  T  V  
                     Query_5462   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGCCCTAGAGGGGACTACGGTGG  270
V  100.0% (249/249)  IGHV3-48*03  227  .....................................................................---------------------  295
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)    IGHD4-17*01  2    -------------------------------------------------------------------------------..........-  11

                                       GT-------------------->                                  
                                       V  T  P  W  G  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_5462   271  TAACTCCCTGGGGGTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (41/41)    IGHJ4*02     8    ----------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_107039

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           364     5e-103
IGHD5-12*01                                                                                           12.2    31    
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGGG	GTGCCTACG	TCCGGGCGTTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGGGGTGCCTACGTCCGGGCGTTTTTTGACTAC	ARRGAYVRAFFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  I  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5463   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAATCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (240/247)  IGHV3-21*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  T  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5463   91   AGTGGGTCTCATCCATTAGTAGTAGTACTAGTTACATATATTATGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (240/247)  IGHV3-21*01  137  ...........................G............C..C..............................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  R  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  R  G  A  Y  V  R  A  
                    Query_5463   181  AGAGATCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGAGGGGTGCCTACGTCCGGGCGT  270
V  97.2% (240/247)  IGHV3-21*01  227  ...AC..............................................................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  88.9% (8/9)      IGHD5-12*01  10   ------------------------------------------------------------------------...G.....---------  18

                                      ---------->                                  
                                      F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5463   271  TTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (43/43)   IGHJ4*02     6    --...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_253748

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD2-2*02                                                                                            21.8    0.041
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCTTATTTTGTGTTAC	TACCAGTTGCTATA	ATGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCTTATTTTGTGTTACTACCAGTTGCTATAATGCTTTTGACTCC	ARDPLFCVTTSCYNAFDS	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  T  H  R  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5464   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGTACTCACCGCTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   ..................A........................G.T..TA......C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  R  N 
                    Query_5464   91   TGGATTGGATATATCTACTACACTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAGGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G........T....G.....G........................................................A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  Q  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  D  P  L  F  C  V  T  T  S 
                    Query_5464   181  CAGTTTTCCCTGCAGCTGAGCTCTGTGACCGCTGCGGACTCGGCCGTGTATTACTGTGCGAGAGATCCCTTATTTTGTGTTACTACCAGT  270
V  94.3% (231/245)  IGHV4-59*01  229  .....C......A..........................A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD2-2*02   16   -----------------------------------------------------------------------------------......C  22

                                      -------------------->                                
                                       C  Y  N  A  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5464   271  TGCTATAATGCTTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  323
D  92.9% (13/14)    IGHD2-2*02   23   .......----------------------------------------------  29
J  97.6% (40/41)    IGHJ4*02     6    ------------.......A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_21049

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            294     6e-82
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TCAG	TAGCAGTGGCTGG	AC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGTAGCAGTGGCTGGACCTTTGAGTCC	VSSSGWTFES	246	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	56	27	18	6	3	66.7
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	131	24	21	3	0	87.5
FR3-IMGT	132	245	114	101	13	0	88.6
CDR3-IMGT (germline)	246	246	1	1	0	0	100
Total	N/A	N/A	246	219	24	3	89


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  P  Y  R  W  M  N  W  V  R  Q  A  P  G  K  G  
                    Query_5465   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACATTTGATCCTTATCGTTGGATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGC  90
V  89.0% (219/246)  IGHV3-7*01   47   .....................................C...AG.AGC...---.......GC............................  133
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y     W  M  S  W  V  R  Q  A  P  G  K  G  

                                      ----------------><-------CDR2-IMGT------><------------------------------------------------
                                      L  E  W  V  A  N  I  N  L  D  G  S  D  K  N  Y  V  D  S  A  R  G  R  L  T  I  S  R  D  D  
                    Query_5465   91   TGGAGTGGGTGGCCAACATAAACCTAGATGGAAGTGACAAAAATTATGTGGACTCTGCGAGGGGCCGACTCACCATCTCCAGAGACGACG  180
V  89.0% (219/246)  IGHV3-7*01   134  ......................G.A............G...T.C.............T..A.......T.................A...  223
                                      L  E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  

                                      ----FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-----
                                      A  R  N  S  V  Y  L  Q  M  D  S  L  R  A  E  D  T  A  I  Y  H  C  V  S  S  S  G  W  T  F  
                    Query_5465   181  CCAGGAACTCAGTATATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCTATTTATCACTGTGTCAGTAGCAGTGGCTGGACCTTTG  270
V  89.0% (219/246)  IGHV3-7*01   224  ...A.......C.G............A..........................G.G...T......------------------------  289
                                      A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                          
D  100.0% (13/13)   IGHD6-19*01  6    ----------------------------------------------------------------------.............-------  18
J  95.2% (40/42)    IGHJ4*02     5    -------------------------------------------------------------------------------------.....  9

                                      ---->                                
                                      E  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5465   271  AGTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  307
J  95.2% (40/42)    IGHJ4*02     10   .C.A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_21048

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           307     1e-85
IGHD3-22*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGAAA	TATGACTATGAT	CTTGGAGGCGTGGGTCTCCCCA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGAAATATGACTATGATCTTGGAGGCGTGGGTCTCCCCAACTTTCCCTCC	ARAPKYDYDLGGVGLPNFPS	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	220	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  N  Y  F  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_5466   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTAATTACTTCTGGAGCTGGATTCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  90.2% (220/244)  IGHV4-59*01  49   ......................................C....G.....A............C..................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       G  I  G  Y  I  Y  Y  S  G  L  T  K  N  N  P  S  L  K  S  R  V  S  I  S  I  D  T  P  K  N 
                    Query_5466   91   GGGATTGGGTATATCTATTATAGTGGACTCACCAAGAACAACCCGTCCCTCAAGAGTCGAGTCAGCATATCAATTGACACGCCCAAGAAC  180
V  90.2% (220/244)  IGHV4-59*01  139  T...................C.....GAG......CT.......C...................C.......G.A......T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       H  F  S  L  K  E  S  S  V  T  A  A  D  T  A  T  Y  Y  C  A  R  A  P  K  Y  D  Y  D  L  G 
                    Query_5466   181  CACTTCTCCCTGAAGGAGAGCTCTGTGACGGCTGCGGACACGGCCACTTATTACTGTGCGAGAGCCCCGAAATATGACTATGATCTTGGA  270
V  90.2% (220/244)  IGHV4-59*01  229  ..G............CT............C...............GTG................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-22*01  2    ------------------------------------------------------------------------...T........------  13

                                      GT------------------------>                                  
                                       G  V  G  L  P  N  F  P  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5466   271  GGCGTGGGTCTCCCCAACTTTCCCTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  93.3% (42/45)    IGHJ4*02     4    ----------------.....GA..A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_107030

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           336     1e-94
IGHD6-25*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGAACGTAGAAT	CGGCTAC	AATCCTAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGAACGTAGAATCGGCTACAATCCTAATTGACTAC	ARANVESATILIDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  Y  G  M  V  W  V  R  Q  A  P  G  K  G  L  
                    Query_5467   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACCTTCAGTTACTATGGCATGGTCTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-30*03  47   ............................T...............AG..........CA................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  D  G  T  K  I  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5467   91   AGTGGGTGGCACTTATATCATATGATGGAACCAAAATATTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  93.2% (232/249)  IGHV3-30*03  137  ...........G..................GT..T.A..A.............................................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  E  M  N  S  L  R  I  E  D  T  A  V  H  Y  C  A  R  A  N  V  E  S  A  T  
                    Query_5467   181  AGAACACGCTGTATCTGGAAATGAACAGCCTGAGAATTGAGGACACGGCTGTTCATTACTGTGCGAGAGCGAACGTAGAATCGGCTACAA  270
V  93.2% (232/249)  IGHV3-30*03  227  .................C.................GC...............GT...............---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-25*01  12   ---------------------------------------------------------------------------------.......--  18

                                      ------------->                                  
                                      I  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5467   271  TCCTAATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (42/42)   IGHJ4*02     7    ------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_253743

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           346     2e-97
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATGG	GGTTCGAGGA	CACTCGACCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTTCGAGGACACTCGACCGTTTTTGATATC	ARDGVRGHSTVFDI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  N  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5468   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTAACTCTTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (232/243)  IGHV4-59*08  49   ........................................G....T...AC.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_5468   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTATAATCCCTCCCTTAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  95.5% (232/243)  IGHV4-59*08  139  ......................................C..C........C.....................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  V  R  G  H  S  T  V 
                    Query_5468   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGATGGGGTTCGAGGACACTCGACCGTT  270
V  95.5% (232/243)  IGHV4-59*08  229  ....................C........C.......................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD3-10*01  11   --------------------------------------------------------------------......G...------------  20
J  93.2% (41/44)    IGHJ3*02     7    -----------------------------------------------------------------------------------------.  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  T  I  I  V  S  S  
                    Query_5468   271  TTTGATATCTGGGGCCAAGGGACAACGATCATCGTCTCTTCAG  313
J  93.2% (41/44)    IGHJ3*02     8    .........................T.G...C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_21045

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            277     8e-77
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GAATGAACCCTGAATT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATGAACCCTGAATTC	ARGMNPEF	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	40	11	0	78.4
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	213	36	0	85.5


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  I  F  R  G  H  W  M  T  W  I  R  H  L  P  D  K  G  L  
                    Query_5469  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTCGTGGCCACTGGATGACTTGGATTCGCCACCTTCCAGATAAGGGGCTGC  90
V  85.5% (213/249)  IGHV3-7*01  47   ....................................C....A..A..T.T.......GC...G.C.....GGC.....GG.........G  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     Q  W  V  A  N  I  K  E  D  G  S  E  E  H  Y  G  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_5469  91   AGTGGGTGGCCAATATAAAGGAAGATGGAAGTGAAGAGCACTATGGTGACTCTGTGAGGGGCCGATTCACCATCTCCCGAGACAACGCCC  180
V  85.5% (213/249)  IGHV3-7*01  137  .............C......C.............GA.AT......TG..........A...................A...........A  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                     Q  S  S  L  F  L  Q  M  N  N  L  R  V  E  D  T  A  I  Y  Y  C  A  R  G  M  N  P  E  F  W  
                    Query_5469  181  AGAGCTCTCTGTTTTTGCAGATGAACAACCTGAGAGTCGAAGACACGGCTATATATTACTGTGCGAGAGGAATGAACCCTGAATTCTGGG  270
V  85.5% (213/249)  IGHV3-7*01  227  ...A...A....A.C....A.......G........C...G.........G.G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  96.7% (29/30)    IGHJ4*02    14   -------------------------------------------------------------------------------------.....  18

                                                              
                                     G  Q  G  T  L  V  I  V  S
                    Query_5469  271  GCCAGGGAACCCTGGTCATCGTCTC  295
J  96.7% (29/30)    IGHJ4*02    19   ..................C......  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_41136

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_5470   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  98.3% (284/289)  IGHV5-51*03  6    ..............................................................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_5470   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ...................................................G............................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_5470   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5470   271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  98.3% (284/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_41131

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           366     2e-103
IGHD2-15*01                                                                                           14.1    9.9   
IGHJ6*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGGGCTGCATC	TTGTAGCGGT	TCCAATTGCTACGACTTAGG	CGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGCTGCATCTTGTAGCGGTTCCAATTGCTACGACTTAGGCGGAATGGACGTC	ARRAASCSGSNCYDLGGMDV	289	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	70	5	0	93.3
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	46	5	0	90.2
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	102	12	0	89.5
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	294	264	30	0	89.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  L  G  S  G  Y  S  F  V 
                    Query_5471   1    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCTGGGTTCTGGATACAGCTTTGTC  90
V  89.8% (264/294)  IGHV5-51*03  1    .....G........G....................A..............................AA...................AC.  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       K  Y  W  I  A  W  V  R  Q  T  P  G  K  G  L  E  W  M  G  T  I  Y  P  S  D  S  D  T  R  Y 
                    Query_5471   91   AAATATTGGATTGCTTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGGACCATCTATCCGTCTGACTCTGATACCCGATAC  180
V  89.8% (264/294)  IGHV5-51*03  91   .GC..C.....C.GC.............T.............................T.........TGG.............A.....  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  L  S  T  A  F  L  Q  W  S  S  L  G  V  S  D 
                    Query_5471   181  AGCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTCTCTCCACCGCCTTCCTGCAGTGGAGCAGCCTGGGGGTCTCGGAC  270
V  89.8% (264/294)  IGHV5-51*03  181  ..................................C.........CA..AG........A...................AA..C.......  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       S  A  I  Y  Y  C  A  R  R  A  A  S  C  S  G  S  N  C  Y  D  L  G  G  M  D  V  W  G  R  G 
                    Query_5471   271  AGCGCCATTTATTACTGTGCGAGACGGGCTGCATCTTGTAGCGGTTCCAATTGCTACGACTTAGGCGGAATGGACGTCTGGGGCCGAGGG  360
V  89.8% (264/294)  IGHV5-51*03  271  .C......G...............------------------------------------------------------------------  294
                                       T  A  M  Y  Y  C  A  R                                                                   
D  90.0% (9/10)     IGHD2-15*01  7    -----------------------------------......T...---------------------------------------------  16
J  93.5% (43/46)    IGHJ6*02     17   -----------------------------------------------------------------...T................A....  41

                                                           
                                       T  T  V  I  V  S  S 
                    Query_5471   361  ACCACGGTCATCGTCTCCTCA  381
J  93.5% (43/46)    IGHJ6*02     42   ..........C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_253747

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           392     2e-111
IGHD5-18*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGT	TGGATACAACTATGGTTAC	CCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTTGGATACAACTATGGTTACCCTCACTTTGACTAC	ARGVGYNYGYPHFDY	261	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	24	0	0	100
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	111	3	0	97.4
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	259	8	0	97


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  
                    Query_5472   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGC  90
V  97.0% (259/267)  IGHV4-59*01  26   ................T.........................................................................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  F  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_5472   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGCTTTATCTATTACACTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGTGTCACCA  180
V  97.0% (259/267)  IGHV4-59*01  116  ...............................G.A...........G......C.............................A.......  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  P  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_5472   181  TATCAGTAGACACGCCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGG  270
V  97.0% (259/267)  IGHV4-59*01  206  ..............T........................................T...............................---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      --------CDR3-IMGT----------------->                                  
                                      V  G  Y  N  Y  G  Y  P  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5472   271  TTGGATACAACTATGGTTACCCTCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  94.7% (18/19)    IGHD5-18*01  2    -........G..........-------------------------------------------------  20
J  100.0% (45/45)   IGHJ4*02     4    ------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_41133

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD2-15*01                                                                                           12.2    31   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CCTAAGGATTG	GGTGGT	TCCTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACCTAAGGATTGGGTGGTTCCTTACTACTTTGACCAC	ARPKDWVVPYYFDH	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  N  T  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5473   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTCAATACTTACTACTGGACCTGGATCCGACAGCCCCCAGGGAAGGGACTGGAG  90
V  91.8% (223/243)  IGHV4-59*01  49   ....................................A...G..G...........G.........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  A  S  K  N 
                    Query_5473   91   TGGATTGGCTATGTCTATTCCAGTGGGAGCACTAACTACAACCCCTCCCTCAAGAGCCGAGTCACCATATCACTGGACGCGTCCAAGAAC  180
V  91.8% (223/243)  IGHV4-59*01  139  ........G...A......A............C.......................T...............G.A...A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  F  C  A  R  P  K  D  W  V  V  P  Y  Y 
                    Query_5473   181  CAGTTCTCCCTGAAACTGACCTCTGTGACCGCTGCCGACACGGCCCTCTATTTCTGTGCGCGACCTAAGGATTGGGTGGTTCCTTACTAC  270
V  91.8% (223/243)  IGHV4-59*01  229  ..............G....G...............G.........G.G....A.......A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-15*01  14   --------------------------------------------------------------------------......----------  19
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5473   271  TTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    ......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_107037

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           324     8e-91
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CTGACGAC	GTAGTGGTTATTAC	CACTCTCCCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCTGACGACGTAGTGGTTATTACCACTCTCCCGTTTGACTAC	AKADDVVVITTLPFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  Y  A  M  S  W  V  R  Q  A  P  G  G  G  L  
                    Query_5474   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCCACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGGGGGGCCTGG  90
V  91.6% (228/249)  IGHV3-23*01  47   ............................................AG..................................AA...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  T  G  S  G  T  N  T  Y  Y  R  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5474   91   AGTGGGTCTCAGGTATTACTGGTAGTGGTACTAACACATACTACAGAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  91.6% (228/249)  IGHV3-23*01  137  ............C.....G..........GG..G..........GC........................................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  I  L  E  M  N  G  L  R  A  E  D  T  A  I  Y  Y  C  A  K  A  D  D  V  V  V  I  
                    Query_5474   181  AGAACACACTTATTCTGGAAATGAACGGCCTGAGAGCCGAGGACACGGCCATATATTATTGTGCGAAAGCTGACGACGTAGTGGTTATTA  270
V  91.6% (228/249)  IGHV3-23*01  227  .......G..GTA....C........A.......................G.......C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (14/14)   IGHD3-22*01  15   -----------------------------------------------------------------------------.............  27

                                      T------------------>                                  
                                      T  T  L  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5474   271  CCACTCTCCCGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (14/14)   IGHD3-22*01  28   .-----------------------------------------------------  28
J  100.0% (43/43)   IGHJ4*02     6    -----------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_106789

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD3-3*01                                                                                            23.8    0.011
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCTGTCCCGC	ATTATGGTTTTTGGAATGATTATT	CCAAAATCTAACTCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTGTCCCGCATTATGGTTTTTGGAATGATTATTCCAAAATCTAACTCTTTCGACACC	REACPALWFLE*LFQNLTLSTP	237	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	26	27	25	1	1	92.6
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	51	0	0	100
CDR2-IMGT	102	122	21	16	5	0	76.2
FR3-IMGT	123	236	114	104	10	0	91.2
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	245	225	19	1	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S   S  P  A  L  S  M  V  G  R  S  M  V  T  T  G  A  G  S  A  S  P  Q  G  R  G  W  S
                    Query_5475   1    ACCCTGTCC-TCACCTGCTCTGTCTATGGTGGGTCGTTCAATGGTCACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  89
V  91.8% (225/245)  IGHV4-34*01  49   .........C........G................C....G....T............................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                        G  L  G  K  F  L  I  V  E  T  P  T  T  T  R  P  S  R  V  E  S  P  C  Q  L  T  R  P  G  T
                    Query_5475   90   TGGATTGGGGAAATTTCTCATAGTGGAGACACCAACTACAACTCGTCCCTCAAGAGTCGAGTCACCTTGTCAGTTGACACGTCCAGGAAC  179
V  91.8% (225/245)  IGHV4-34*01  139  ..............CAA..........AG.............C.......................A.A.....A..........A....  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                        S  S  P  *  S  *  P  P  *  P  S  R  T  R  L  S  I  T  V  R  E  A  C  P  A  L  W  F  L  E
                    Query_5475   180  CAGTTCTCCCTGAAGCTGACCTCCCTGACCGTCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCCTGTCCCGCATTATGGTTTTTGGA  269
V  91.8% (225/245)  IGHV4-34*01  229  ...................G...TG......C...............G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  83.3% (20/24)    IGHD3-3*01   3    ---------------------------------------------------------------------------....C.A........  17

                                      -IMGT--------------------------->                                  
                                        *  L  F  Q  N  L  T  L  S  T  P  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_5475   270  ATGATTATTCCAAAATCTAACTCTTTCGACACCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  336
D  83.3% (20/24)    IGHD3-3*01   18   G..G.....----------------------------------------------------------  26
J  95.3% (41/43)    IGHJ5*02     9    ------------------------......C.........A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_241589

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           417     6e-119
IGHD3-3*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCAACCTGACTC	TTTTGGAGTGGTTAT	CTC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGGCAACCTGACTCTTTTGGAGTGGTTATCTCCTTTGACAAC	TRGQPDSFGVVISFDN	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  N  F  S  G  Y 
                    Query_5476   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAACTTTAGCGGCTAT  91
V  96.2% (278/289)  IGHV1-18*01  7    ............................................................................C.....C.A.....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  T  G  Y  N  G  K  R  N  Y  A  Q 
                    Query_5476   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCACCGGTTACAATGGTAAAAGAAACTATGCACAG  181
V  96.2% (278/289)  IGHV1-18*01  97   ..................................................A.......G..C............C.C.............  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  D  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_5476   182  AATCTCCAGGACAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.2% (278/289)  IGHV1-18*01  187  ..G.......G...............................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  T  R  G  Q  P  D  S  F  G  V  V  I  S  F  D  N  W  G  Q  G  T  L  V  T  V  S 
                    Query_5476   272  GTGTATTACTGTACGAGAGGGCAACCTGACTCTTTTGGAGTGGTTATCTCCTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  361
V  96.2% (278/289)  IGHV1-18*01  277  ............G......-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (15/15)   IGHD3-3*01   11   --------------------------------...............-------------------------------------------  25
J  97.7% (43/44)    IGHJ4*02     5    --------------------------------------------------.......T................................  44

                                          
                                       S  
                    Query_5476   362  TCAG  365
J  97.7% (43/44)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_241588

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           420     7e-120
IGHD7-27*01                                                                                           18.0    0.67  
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCCGCCGCGGCA	AACTGGGGA	T	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCGCCGCGGCAAACTGGGGATTGATGCTTTTCATATC	ARPRRGKLGIDAFHI	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	281	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_5477   3    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTCAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  92
V  95.9% (281/293)  IGHV5-51*03  2    ....G..........................G..........................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  F  I  G  W  V  R  Q  T  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  
                    Query_5477   93   GTTACTTCATCGGCTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACA  182
V  95.9% (281/293)  IGHV5-51*03  92   .C....GG...................T.........................................G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_5477   183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  95.9% (281/293)  IGHV5-51*03  182  ................................................G.........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      S  G  I  Y  Y  C  A  R  P  R  R  G  K  L  G  I  D  A  F  H  I  W  G  Q  G  T  M  V  T  V  
                    Query_5477   273  GCGGCATATATTATTGTGCGAGACCCCGCCGCGGCAAACTGGGGATTGATGCTTTTCATATCTGGGGCCAAGGGACAATGGTCACCGTCT  362
V  95.9% (281/293)  IGHV5-51*03  272  C..C...G.....C.........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (9/9)     IGHD7-27*01  3    ------------------------------------.........---------------------------------------------  11
J  98.0% (49/50)    IGHJ3*02     1    ----------------------------------------------..........G.................................  44

                                            
                                      S  S  
                    Query_5477   363  CTTCAG  368
J  98.0% (49/50)    IGHJ3*02     45   ......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_90580

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD1-26*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGG	TAGTGGG	CAATACAGTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCT	ARGGSGQYSAYFGS	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  I  S  D
                    Query_5478   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCATCTGGATACAGCTTTATCAGTGA  90
V  93.1% (269/289)  IGHV5-51*01  6    .............................A....................A..............GT................C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  G  K  G  L  D  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  S  P
                    Query_5478   91   CTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGACTGGATGGGGGTCATTTATCCTGGTGACTCTGAAACCAGATATAGTCC  180
V  93.1% (269/289)  IGHV5-51*01  96   .......................T..................G.........A....C.................T........C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  T  S  L  K  A  S  D  T  A
                    Query_5478   181  GTCCTTCCAAGGCCAGGTCACCATTTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGACCAGCCTGAAGGCCTCGGACACCGC  270
V  93.1% (269/289)  IGHV5-51*01  186  ........................C...................G....................G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  F  C  A  R  G  G  S  G  Q  Y  S  A  Y  F  G  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5478   271  CATATACTTCTGTGCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.1% (269/289)  IGHV5-51*01  276  ...G..T.A..........----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD1-26*01  5    ------------------------.......----------------------------------------------------------  11
J  93.6% (44/47)    IGHJ4*02     2    ------------------------------------------........A..AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_241583

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD1-26*01                                                                                           19.9    0.16 
IGHJ3*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TGAGGGTATG	AGTGGGAGCT	TCTCGACTAGCCCTTGG	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGAGGGTATGAGTGGGAGCTTCTCGACTAGCCCTTGGGATGGTTTTGACATC	ASEGMSGSFSTSPWDGFDI	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  N  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_5479   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTAGTAGTAATTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   ......................................C..C.......G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  M  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  A 
                    Query_5479   91   CTGGAGTGGATTGGGAGTATGTATTATAGTGGGAGTACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCCGTAGACACGGCC  180
V  94.8% (235/248)  IGHV4-39*01  139  ....................C..............C................................C..................T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  K  Q  F  S  L  K  R  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  E  G  M  S  G  S  F 
                    Query_5479   181  AAGAAGCAGTTCTCCCTGAAGAGGACCTCTGTGACCGCCGCAGACACGGCTGTATATTATTGTGCGAGTGAGGGTATGAGTGGGAGCTTC  270
V  94.8% (235/248)  IGHV4-39*01  229  .....C...............CT..G...........................G.....C........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (10/10)   IGHD1-26*01  6    ------------------------------------------------------------------------------..........--  15

                                      3-IMGT----------------------->                                  
                                       S  T  S  P  W  D  G  F  D  I  W  G  Q  G  T  M  I  T  V  S  S  
                    Query_5479   271  TCGACTAGCCCTTGGGATGGTTTTGACATCTGGGGCCAAGGGACAATGATCACCGTCTCTTCAG  334
J  93.9% (46/49)    IGHJ3*02     2    ---------------....C......T.....................G...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_106780

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           329     3e-92
IGHD2-8*01                                                                                            12.2    31   
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TAATGG	CCCGACTGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGGCCCGACTGAACTACGGCATGGACGTC	ARLMARLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  L  T  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_5480   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCCTCACCAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCCGGGAAGGGACTGGAA  90
V  93.0% (227/244)  IGHV4-59*08  49   ..................A............G....A...GT..................A.............A..............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  R  P  N  N  N  P  S  L  R  S  R  V  T  I  S  V  D  A  S  K  N 
                    Query_5480   91   TGGATTGAGTATATCTATTACAGAGGGCGTCCCAACAACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACGCGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*08  139  .......G...............T...A.CA.....T...............A.........................A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  A  R  L  N  Y  G  M 
                    Query_5480   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACTAATGGCCCGACTGAACTACGGCATG  270
V  93.0% (227/244)  IGHV4-59*08  229  ...................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-8*01   13   ----------------------------------------------------------------......--------------------  18
J  94.0% (47/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_5480   271  GACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCGTCA  309
J  94.0% (47/50)    IGHJ6*02     24   .............A.....................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_241581

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD1-26*01                                                                                           23.8    0.012 
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGTATGCCGTCC	TGGGAGCTACTA	GT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTATGCCGTCCTGGGAGCTACTAGTTGGTTCGACCCC	AKYAVLGATSWFDP	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	67	7	0	90.5
CDR1-IMGT	76	99	24	18	6	0	75
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	292	4	4	0	0	100
Total	N/A	N/A	291	270	21	0	92.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  V  E  V  K  E  P  R  E  S  L  R  I  S  C  R  G  S  G  Y  T  F  I  
                    Query_5481   2    AGATGCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAGAGCCCAGGGAGTCTCTGAGGATCTCCTGTAGGGGCTCTGGGTACACCTTTATTA  91
V  92.8% (270/291)  IGHV5-51*01  2    ..G.....................C..........A.....G............A...........A...T.....A....G.....CC.  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  
                    Query_5481   92   GTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGAGACCAGATACA  181
V  92.8% (270/291)  IGHV5-51*01  92   .C..C.......G...........................................A......................T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  Q  G  H  V  T  L  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  S  L  K  A  S  D  
                    Query_5481   182  ACCCGTCCTTCCAAGGCCACGTCACCCTCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCACTGGAGCAGCCTGAAGGCCTCGGACA  271
V  92.8% (270/291)  IGHV5-51*01  182  G..................G......A.....................G...............G.........................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  A  K  Y  A  V  L  G  A  T  S  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  
                    Query_5481   272  CCGCCATGTATTACTGTGCGAAGTATGCCGTCCTGGGAGCTACTAGTTGGTTCGACCCCTGGGGCCAGGGAACCCTAGTCATCGTCTCCT  361
V  92.8% (270/291)  IGHV5-51*01  272  .....................---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (12/12)   IGHD1-26*01  8    ---------------------------------............---------------------------------------------  19
J  95.7% (44/46)    IGHJ5*02     6    -----------------------------------------------.............................G....C........  48

                                         
                                      S  
                    Query_5481   362  CAG  364
J  95.7% (44/46)    IGHJ5*02     49   ...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_241580

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         339     1e-95
IGHD3-10*01                                                                                           10.3    115  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GA	GGGGA	CAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAGGGGACATTATGGACGTC	ARGGDIMDV	246	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_5482     4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGTTGGATCCGGCAGCCACCAGGGAAGGGCC  93
V  93.6% (233/249)  IGHV4-30-2*01  50   .....TCC...A....C............................................C............................  139
                                           L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  H  H  S  G  L  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  R  S  
                    Query_5482     94   TGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACAGGTCCA  183
V  93.6% (233/249)  IGHV4-30-2*01  140  .............G......T...........AG..C.T...A......................G........................  229
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  

                                        -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                        K  N  Q  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  D  I  M  D  V  
                    Query_5482     184  AGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAGGGGACATTATGGACGTCT  273
V  93.6% (233/249)  IGHV4-30-2*01  230  ..........C.......A..................................................---------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01    16   -----------------------------------------------------------------------.....--------------  20
J  100.0% (43/43)   IGHJ6*02       20   -------------------------------------------------------------------------------...........  30

                                                                        
                                        W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5482     274  GGGGCCAAGGGACCACGGTCACCGTCTCCTCA  305
J  100.0% (43/43)   IGHJ6*02       31   ................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_241587

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           405     3e-115
IGHD2-8*02                                                                                            12.2    34    
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	A	GTACTG	ACACC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTACTGACACCGACTAT	ARSTDTDY	284	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  D  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_5483   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCGGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  94.8% (274/289)  IGHV5-51*03  6    .............................A............G..................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  A  T  T  R  Y  S  P
                    Query_5483   91   CTGGATCGGCTGGGTGCGCCAGAGGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACGCTACTACCAGATACAGCCC  180
V  94.8% (274/289)  IGHV5-51*03  96   .......................T...............................A..............T..GA...............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  S  A
                    Query_5483   181  GTCGTTCGAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACAGCGC  270
V  94.8% (274/289)  IGHV5-51*03  186  ...C...C..............A................................C..............................C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------CDR3-IMGT------>                                  
                                        M  Y  Y  C  A  R  S  T  D  T  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_5483   271  CATGTATTATTGTGCGAGAAGTACTGACACCGACTATTGGGGCCAGGGCACCCTGGTCATCGTCTCCTCAG  341
V  94.8% (274/289)  IGHV5-51*03  276  .........C.........----------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                     
D  100.0% (6/6)     IGHD2-8*02   9    --------------------......---------------------------------------------  14
J  92.5% (37/40)    IGHJ4*02     9    -------------------------------.....C...........A..........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_272204

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           265     5e-73
IGHD3-16*01                                                                                           21.8    0.038
IGHJ4*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAGGCCCCGGTTCCC	TTTGGGGGAGT	N/A	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGAGGCCCCGGTTCCCTTTGGGGGAGTCTAC	ARDEAPVPFGGVY	230	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	46	5	0	90.2
CDR2-IMGT	92	115	24	19	5	0	79.2
FR3-IMGT	116	229	114	101	13	0	88.6
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	197	28	0	87.6


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  V  S  D  S  G  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  L  A  A  I  W  Y  D
                    Query_5484   13   GTCTGGATTCACCGTCAGTGATTCTGGCATACACTGGGTCCGCCAGGCGCCAGGCAAGGGGCTGGAGTGGCTGGCTGCTATTTGGTATGA  102
V  87.6% (197/225)  IGHV3-33*01  72   .............T.....AGC.A......G.................T.....................G....A.T...A........  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  D  K  K  F  Y  T  D  S  V  K  D  R  F  T  I  S  R  D  N  Y  R  N  T  V  Y  L  Q  M  D
                    Query_5484   103  TGGGGATAAAAAATTCTATACAGACTCCGTGAAGGACCGATTCACCATCTCCAGAGACAATTACAGGAATACGGTGTACCTGCAAATGGA  192
V  87.6% (197/225)  IGHV3-33*01  162  ...AAG...T....A....G...............G..........................C..A...C...C....T.........A.  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------CDR3-IMGT-------------->              
                                        G  L  R  A  D  D  T  G  V  Y  Y  C  A  R  D  E  A  P  V  P  F  G  G  V  Y  G  G  Q  G  P
                    Query_5484   193  CGGCCTGAGAGCCGACGACACGGGTGTCTATTACTGTGCGAGAGATGAGGCCCCGGTTCCCTTTGGGGGAGTCTACGGGGGCCAGGGACC  282
V  87.6% (197/225)  IGHV3-33*01  252  .A.............G.......C...G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (11/11)   IGHD3-16*01  15   -------------------------------------------------------------...........------------------  25
J  89.5% (34/38)    IGHJ4*02     11   ------------------------------------------------------------------------....T...........A.  28

                                                          
                                        L  V  P  V  S  S  
                    Query_5484   283  CCTTGTCCCCGTCTCCTCAG  302
J  89.5% (34/38)    IGHJ4*02     29   ...G...A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_241585

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            319     2e-89
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGTGA	GAGACTGAGT	GTAGTACCACCTG	GCACGAAACGAGGTG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGAGAGACTGAGTGTAGTACCACCTGGCACGAAACGAGGTGACTGGTTCGACCCC	ASERLSVVPPGTKRGDWFDP	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  L  T  F  S  D  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5485  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACCTTTAGTGACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-7*03  47   ................................T...........AG............................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  L  A  M  I  N  E  D  G  R  A  R  F  Y  V  D  S  V  K  G  R  F  I  I  S  R  D  N  A  
                    Query_5485  91   AGTGGTTGGCCATGATAAATGAAGATGGACGTGCGAGATTCTATGTGGACTCTGTGAAGGGCCGATTCATCATTTCCAGAGACAACGCCA  180
V  90.8% (227/250)  IGHV3-7*03  137  .....G......AC.....GC........A...A..A..A.............................C...C................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------------CD
                                     K  N  S  L  F  L  Q  M  Y  S  L  R  V  D  D  T  A  V  Y  Y  C  A  S  E  R  L  S  V  V  P  
                    Query_5485  181  AGAACTCGCTCTTTCTGCAAATGTACAGCCTGAGAGTCGACGACACGGCCGTCTATTATTGTGCGAGTGAGAGACTGAGTGTAGTACCAC  270
V  90.8% (227/250)  IGHV3-7*03  227  .......A..G.A..........A............C...G...........G.....C........A..--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD2-2*01  12   --------------------------------------------------------------------------------.........G  21

                                     R3-IMGT------------------------>                                  
                                     P  G  T  K  R  G  D  W  F  D  P  R  G  Q  G  T  L  V  I  V  S  S  
                    Query_5485  271  CTGGCACGAAACGAGGTGACTGGTTCGACCCCAGGGGCCAGGGAACCCTGGTCATCGTCTCTTCAG  336
D  92.3% (12/13)    IGHD2-2*01  22   ...---------------------------------------------------------------  24
J  93.8% (45/48)    IGHJ5*02    4    ------------------..............T.....................C......C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_106786

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTCC	AEEKRRVPRGTFHS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  T  Y  A  V  S  W  V  R  Q  T  P  G  K  G  L  
                    Query_5486   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCGTGAGCTGGGTCCGCCAGACTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-23*01  47   ................................T.........G..G.......A.................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  G  G  A  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  
                    Query_5486   91   AGTGGGTCTCAGCCATTAGTGGTGGTGGTGCTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGA  180
V  94.8% (237/250)  IGHV3-23*01  137  .............T.........A......G...............................................G.........C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  R  L  R  A  D  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  
                    Query_5486   181  AGAACACGCTGTATCTGCAAATGAACAGACTGAGAGCCGACGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGG  270
V  94.8% (237/250)  IGHV3-23*01  227  ............................C...........G........................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------------------------......------------  17

                                      ------------->                                  
                                      G  T  F  H  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5486   271  GAACCTTTCACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  95.5% (42/44)    IGHJ4*02     5    ----....G...A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_268771

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            318     6e-89
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-22*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTTTG	ACTATGATAGTCGTGGCTTTTAC	AGACGTTCTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTTTGACTATGATAGTCGTGGCTTTTACAGACGTTCTAACTACTTTGACTTC	RGALTMIVVAFTDVLTTLTS	242	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	51	0	0	100
CDR2-IMGT	108	128	21	21	0	0	100
FR3-IMGT	129	241	114	104	9	1	91.2
CDR3-IMGT (germline)	242	246	5	5	0	0	100
Total	N/A	N/A	247	227	19	1	91.9


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  T  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_5487   1    GGTCCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCACTACTAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  91.9% (227/247)  IGHV4-4*01   47   ..A.....TCC...A.....G.....................GC.G......C.....................................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  Q  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  
                    Query_5487   91   TGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCCAGTACAACCCGTCACTCAAGAGTCGAGTCACGATATCAGTAGACAAGTCCA  180
V  91.9% (227/247)  IGHV4-4*01   137  ......................................A.C...........C.................C...................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  I   S  *  G  *  V  L  *  P  P  R  T  R  P  C  I  S  V  R  G  A  L  T  M  I  V  V 
                    Query_5487   181  AGAACCAGATCT-CCTGAGGTTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGGCTTTGACTATGATAGTCGTG  269
V  91.9% (227/247)  IGHV4-4*01   227  ........T...C.....A.C....C...............................G.........-----------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                          
D  87.0% (20/23)    IGHD3-22*01  6    ---------------------------------------------------------------------------...........A...  20

                                      R3-IMGT------------------------>                                  
                                       A  F  T  D  V  L  T  T  L  T  S  G  A  G  E  P  W  S  L  S  P  Q 
                    Query_5487   270  GCTTTTACAGACGTTCTAACTACTTTGACTTCGGGGGCCGGGGAACCCTGGTCGCTGTCTCCTCAG  335
D  87.0% (20/23)    IGHD3-22*01  21   .T.A....----------------------------------------------------------  28
J  89.6% (43/48)    IGHJ4*02     1    ------------------............A.T......A.............A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_268770

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            324     8e-91
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TAGAGAGGTCCGCATTGA	TAGTGCTTATTAC	GAGGGACCTCC	TGACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAGAGAGGTCCGCATTGATAGTGCTTATTACGAGGGACCTCCTGACAAC	ASREVRIDSAYYEGPPDN	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  T  V  S  G  D  S  I  S  S  D  H  W  W  T  W  V  R  Q  P  P  G  K  G  
                    Query_5488   1    GGTCCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCAGCAGTGATCACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  91.9% (227/247)  IGHV4-4*02   47   ..A.....TCC...A.....G............G.............AG.A.........G.............................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  T  G  S  T  N  Y  N  P  S  L  G  G  R  V  S  I  S  V  D  K  S  
                    Query_5488   91   TGGAGTGGATAGGGGAAATCTATCATACTGGGAGCACCAACTACAACCCGTCCCTCGGGGGTCGAGTCTCCATATCAGTAGACAAGTCCA  180
V  91.9% (227/247)  IGHV4-4*02   137  ..........T................G............................AA.A........A.....................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  Q  F  S  L  I  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  V  R  I  D  S  
                    Query_5488   181  AGAACCAGTTCTCCCTGATACTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGTAGAGAGGTCCGCATTGATAGTG  270
V  91.9% (227/247)  IGHV4-4*02   227  ..................AG.....C.........................................-----------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  92.3% (12/13)    IGHD3-22*01  16   -------------------------------------------------------------------------------------.....  20

                                      IMGT--------------------->                                  
                                      A  Y  Y  E  G  P  P  D  N  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_5488   271  CTTATTACGAGGGACCTCCTGACAACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  330
D  92.3% (12/13)    IGHD3-22*01  21   G.......----------------------------------------------------  28
J  95.1% (39/41)    IGHJ4*02     8    -------------------....T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_285048

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           433     1e-123
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	73	1	0	98.6
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	285	8	0	97.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_5489   4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCA  93
V  97.3% (285/293)  IGHV5-51*03  2    ..G...............................................................................C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_5489   94   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  183
V  97.3% (285/293)  IGHV5-51*03  92   G.........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_5489   184  GTCCGTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  97.3% (285/293)  IGHV5-51*03  182  .C..........................C....C....A..................A................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_5489   274  CCGCCATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  363
V  97.3% (285/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)   IGHD6-19*01  4    --------------------------------------...............-------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   --------------------------------------------------------..................................  45

                                         
                                      S  
                    Query_5489   364  CAG  366
J  100.0% (37/37)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_272205

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           316     2e-88
IGHD6-6*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5490   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.7% (225/248)  IGHV3-21*01  47   ............................T............AG...C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  G  
                    Query_5490   91   AGTGGGTCTCATCCATCAGTAGTAGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  90.7% (225/248)  IGHV3-21*01  137  ................T........T...AGT......T.C..C..A......G..A..............................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_5490   181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGGGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  90.7% (225/248)  IGHV3-21*01  227  ....C..................AA.........A.................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5490   271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_268775

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TAGAGAGGTCCGCATTGA	TAGTGCTTATTAC	GAGGGACCTCC	TGACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAGAGAGGTCCGCATTGATAGTGCTTATTACGAGGGACCTCCTGACAAC	ASREVRIDSAYYEGPPDN	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	230	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  D  H  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_5491   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTGATCACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.9% (230/245)  IGHV4-4*02   49   ..................G............G.............AG.A.........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  T  G  S  T  N  Y  N  P  S  L  G  G  R  V  S  I  S  V  D  K  S  K 
                    Query_5491   91   GAGTGGATAGGGGAAATCTATCATACTGGGAGCACCAACTACAACCCGTCCCTCGGGGGTCGAGTCTCCATATCAGTAGACAAGTCCAAG  180
V  93.9% (230/245)  IGHV4-4*02   139  ........T................G............................AA.A........A.......................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                       N  Q  F  S  L  I  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  V  R  I  D  S  A 
                    Query_5491   181  AACCAGTTCTCCCTGATACTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGTAGAGAGGTCCGCATTGATAGTGCT  270
V  93.9% (230/245)  IGHV4-4*02   229  ................AG.....C.........................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  92.3% (12/13)    IGHD3-22*01  16   -----------------------------------------------------------------------------------.....G.  22

                                      GT--------------------->                                  
                                       Y  Y  E  G  P  P  D  N  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_5491   271  TATTACGAGGGACCTCCTGACAACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  328
D  92.3% (12/13)    IGHD3-22*01  23   ......----------------------------------------------------  28
J  95.1% (39/41)    IGHJ4*02     8    -----------------....T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_268774

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTCTGTG	AGCAGTGCCTGGT	CGTTTGGTTCCCCCCCACGACTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCTGTGAGCAGTGCCTGGTCGTTTGGTTCCCCCCCACGACTCTACTACCTCGACTGC	ARHSVSSAWSFGSPPRLYYLDC	250	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	135	27	21	0	6	77.8
FR3-IMGT	136	249	114	108	6	0	94.7
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	243	8	6	94.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  H  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_5492   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGCAGTTACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.6% (243/257)  IGHV4-39*01  49   ...............................................T......T...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  N  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D 
                    Query_5492   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCAACACCAACTACAACCCGTCCCTCAAGAGTCGAGTAACCATGTCCGTAGAC  180
V  94.6% (243/257)  IGHV4-39*01  139  ...................................------....T............................C.....A.........  222
                                       L  E  W  I  G  S  I  Y  Y  S  G  S        T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------------
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  T  Y  Y  C  A  R  H  S  V  S  S 
                    Query_5492   181  ACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGAGCGCCGCAGACACGGCTACGTATTACTGTGCGAGACATTCTGTGAGCAGT  270
V  94.6% (243/257)  IGHV4-39*01  223  ........................................C................GT..................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  92.3% (12/13)    IGHD6-19*01  7    ------------------------------------------------------------------------------------......  12

                                      --------CDR3-IMGT--------------------------->                                  
                                       A  W  S  F  G  S  P  P  R  L  Y  Y  L  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5492   271  GCCTGGTCGTTTGGTTCCCCCCCACGACTCTACTACCTCGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  349
D  92.3% (12/13)    IGHD6-19*01  13   .G.....------------------------------------------------------------------------  19
J  93.8% (45/48)    IGHJ4*02     1    -------------------------------.....T.T....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_268777

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            397     7e-113
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	AATGGCG	ATAGCACTGGCTGGT	GT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAAATGGCGATAGCACTGGCTGGTGTTACTTTGACTAC	ARNGDSTGWCYFDY	273	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	158	27	24	3	0	88.9
FR3-IMGT	159	272	114	109	5	0	95.6
CDR3-IMGT (germline)	273	278	6	6	0	0	100
Total	N/A	N/A	278	266	12	0	95.7


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  T  I  S  G  D  S  I  S  S  N  N  A  A  W  N  W  
                    Query_5493   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTACCATCTCCGGGGACAGTATCTCTAGCAACAATGCTGCTTGGAACTGGA  90
V  95.7% (266/278)  IGHV6-1*01   26   .........................................G.................G............G.................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  A  Y  Y  R  S  K  W  Y  D  D  Y  S  V  S  V  K  
                    Query_5493   91   TCAGGCAGTCCCCATCGCGAGGCCTTGAGTGGCTGGGAAGGGCATATTACAGGTCCAAGTGGTATGATGATTATTCAGTCTCTGTGAAGA  180
V  95.7% (266/278)  IGHV6-1*01   116  .................A.......................A....C..................A........G....A........A.  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_5493   181  GTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCTCTGCAACTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  95.7% (266/278)  IGHV6-1*01   206  ...........................................C.....G........................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------------CDR3-IMGT--------------->                                  
                                      C  A  R  N  G  D  S  T  G  W  C  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5493   271  GTGCAAGAAATGGCGATAGCACTGGCTGGTGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  348
V  95.7% (266/278)  IGHV6-1*01   296  ........----------------------------------------------------------------------  303
                                      C  A  R                                                                       
D  93.3% (14/15)    IGHD6-19*01  5    ---------------......G........------------------------------------------------  19
J  100.0% (46/46)   IGHJ4*02     3    --------------------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_268776

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         325     3e-91
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	C	TTACTATGATAGTAG	CGGCTCTTCCCTCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGCTTACTATGATAGTAGCGGCTCTTCCCTCAACTACTTTGACCAC	ARAYYDSSGSSLNYFDH	250	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	63	36	28	2	6	77.8
FR2-IMGT	64	114	51	49	2	0	96.1
CDR2-IMGT	115	135	21	19	2	0	90.5
FR3-IMGT	136	249	114	105	9	0	92.1
CDR3-IMGT (germline)	250	256	7	7	0	0	100
Total	N/A	N/A	256	234	16	6	91.4


Alignments

                                        <--------FR1-IMGT---------><-------------CDR1-IMGT------------><--------------------FR2-IM
                                         T  L  S  L  T  C  A  V  S  F  S  R  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G 
                    Query_5494     1    ACCCTGTCCCTCACCTGCGCTGTCTCTTTCTCTCGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGG  90
V  91.4% (234/256)  IGHV4-30-4*01  49   ..................A........G------.....................A..................................  132
                                         T  L  S  L  T  C  T  V  S        G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G 

                                        GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                         K  G  L  E  W  I  G  N  I  C  Y  S  G  S  T  Y  F  N  P  S  L  K  R  R  L  T  M  S  V  D 
                    Query_5494     91   AAGGGCCTTGAGTGGATTGGGAACATCTGTTACAGTGGGAGCACGTACTTCAACCCGTCCCTCAAGAGGCGACTTACCATGTCAGTGGAC  180
V  91.4% (234/256)  IGHV4-30-4*01  133  ........G............T......A...............C....A..................T...G.......A.....A...  222
                                         K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                        --------FR3-IMGT----------------------------------------------------><--------------------
                                         K  S  K  N  Q  F  S  L  H  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  Y  Y  D  S 
                    Query_5494     181  AAGTCCAAGAACCAGTTCTCCCTGCACCTGAGCTCTGTGACTGCCGCTGACACGGCCGTGTATTACTGTGCCAGAGCTTACTATGATAGT  270
V  91.4% (234/256)  IGHV4-30-4*01  223  .C......................A.G....................A............................--------------  298
                                         T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  100.0% (15/15)   IGHD3-22*01    4    -----------------------------------------------------------------------------.............  16

                                        CDR3-IMGT-------------------->                                 
                                         S  G  S  S  L  N  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_5494     271  AGCGGCTCTTCCCTCAACTACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  333
D  100.0% (15/15)   IGHD3-22*01    17   ..-------------------------------------------------------------  18
J  97.9% (46/47)    IGHJ4*02       1    ----------------...........T...................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_285042

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         378     3e-107
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GCCTTCGGG	ACTATGTTTCGGGGAATTA	CT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGCCTTCGGGACTATGTTTCGGGGAATTACTACAACTGGTTCGACCCC	ARGLRDYVSGNYYNWFDP	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_5495     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-30-4*01  49   ..................A..............................A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_5495     91   CTGGAGTGGATTGGGTACATCTATTACAGTGGAAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  98.4% (246/250)  IGHV4-30-4*01  139  ................................G.........................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R  G  L  R  D  Y  V  S 
                    Query_5495     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTGCTGTGCCAGAGGCCTTCGGGACTATGTTTCG  270
V  98.4% (246/250)  IGHV4-30-4*01  229  ..........................................................A...........--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.5% (17/19)    IGHD3-10*01    6    -------------------------------------------------------------------------------......G....  16

                                        -IMGT--------------------->                                  
                                         G  N  Y  Y  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5495     271  GGGAATTACTACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  89.5% (17/19)    IGHD3-10*01    17   ....G...-----------------------------------------------------  24
J  100.0% (51/51)   IGHJ5*02       1    ----------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_285043

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	N/A	AGCGAGGGCCTGCCTGGCACAC	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCGAGGGCCTGCCTGGCACACTGCTTTTGATATC	AKRGPAWHTAFDI	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	243	4	4	0	0	100
Total	N/A	N/A	240	223	17	0	92.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  N  S  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_5496   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAATTCGTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  92.9% (223/240)  IGHV4-59*08  50   .....TCC...A..............................G..AC.......G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  F  N  S  G  N  T  N  Y  N  P  S  P  R  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_5496   94   GGATTGGGTATATCTTTAACAGTGGGAACACCAACTACAACCCCTCCCCCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  92.9% (223/240)  IGHV4-59*08  140  ...............A.T.........G....................T..A......................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  R  G  P  A  W  H  T  A  F  
                    Query_5496   184  AGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTATATTATTGTGCGAAGCGAGGGCCTGCCTGGCACACTGCTTTTG  273
V  92.9% (223/240)  IGHV4-59*08  230  .............G....G...........................G.....C.......------------------------------  289
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
J  100.0% (47/47)   IGHJ3*02     4    ----------------------------------------------------------------------------------........  11

                                      ---->                                  
                                      D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5496   274  ATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  312
J  100.0% (47/47)   IGHJ3*02     12   .......................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_285040

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           361     4e-102
IGHD3-22*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGCCGATCC	TATAACGATGATAGTAGTGGTTA	CCC	CTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGCCGATCCTATAACGATGATAGTAGTGGTTACCCCTTGGACTAT	ARVRRSYNDDSSGYPLDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5497   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAGTTATGAGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGTTGG  90
V  96.4% (240/249)  IGHV3-48*03  47   ...........................................T........A.................................C...  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  G  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5497   91   AGTGGGTTTCATACATTAGTAGTAGTGGTAGTGGCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (240/249)  IGHV3-48*03  137  ................................AC........................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  T  N  S  L  R  A  D  D  T  A  V  Y  F  C  A  R  V  R  R  S  Y  N  D  
                    Query_5497   181  AGAACTCACTGTATTTGCAAACGAACAGCCTGAGAGCCGACGACACGGCTGTTTATTTCTGTGCGAGAGTCCGCCGATCCTATAACGATG  270
V  96.4% (240/249)  IGHV3-48*03  227  ..............C......T..................G................A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.3% (21/23)    IGHD3-22*01  2    --------------------------------------------------------------------------------...T..T...  11

                                      IMGT--------------------->                                  
                                      D  S  S  G  Y  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5497   271  ATAGTAGTGGTTACCCCTTGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  330
D  91.3% (21/23)    IGHD3-22*01  12   .............-----------------------------------------------  24
J  93.2% (41/44)    IGHJ4*02     5    ----------------...T.....C.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_285041

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           315     5e-88
IGHD6-13*01                                                                                           18.0    0.62 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTGGT	CAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTGGTCAGCAGCTGACTGACTAC	ARDSGQQLTDY	276	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	275	147	111	3	33	75.5
CDR3-IMGT (germline)	276	283	8	8	0	0	100
Total	N/A	N/A	283	244	6	33	86.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_5498   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  86.2% (244/283)  IGHV3-21*01  47   ..............................................C..................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  H  I  Y  Y  G  D  S  V  K  G  R  F  T  Y  Y  A  D  S  V  
                    Query_5498   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAGTCACATATATTATGGAGACTCAGTGAAGGGCCGATTCACCTATTACGCAGACTCAGTGA  180
V  86.2% (244/283)  IGHV3-21*01  137  ................................T.....---------------------------------..C................  193
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I                                   Y  Y  A  D  S  V  

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                      K  G  R  F  T  I  S  R  D  D  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  
                    Query_5498   181  AGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATT  270
V  86.2% (244/283)  IGHV3-21*01  194  ..........................A..........................................................G....  283
                                      K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-----------CDR3-IMGT----------->                                  
                                      Y  C  A  R  D  S  G  Q  Q  L  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5498   271  ACTGTGCGAGAGATTCTGGTCAGCAGCTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
V  86.2% (244/283)  IGHV3-21*01  284  .............-----------------------------------------------------------  296
                                      Y  C  A  R                                                              
D  100.0% (9/9)     IGHD6-13*01  9    --------------------.........-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_285046

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	C	ACTATGATGGTAGTGGTTATT	CCGTG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACACTATGATGGTAGTGGTTATTCCGTGAACTGGTCCGACCCC	ARHYDGSGYSVNWSDP	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  N  Y  Y  W  N  W  T  R  Q  P  P  G  K  G  L  E 
                    Query_5499   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAATTACTACTGGAACTGGACCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (230/243)  IGHV4-59*01  49   ...............................G........G..G...........G.....T............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_5499   91   TGGATTGGCTATATCTATTACAGTGGAAGCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  94.7% (230/243)  IGHV4-59*01  139  ........G.................G........C....................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  D  G  S  G  Y  S  V 
                    Query_5499   181  CACTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGACACTATGATGGTAGTGGTTATTCCGTG  270
V  94.7% (230/243)  IGHV4-59*01  229  ..G................G...........................G............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.2% (20/21)    IGHD3-22*01  6    ----------------------------------------------------------------........A............-----  26

                                      -------------->                                  
                                       N  W  S  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5499   271  AACTGGTCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  98.0% (48/49)    IGHJ5*02     3    .......T.........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_285044

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD1-7*01                                                                                            12.2    32   
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGCGAGGA	TGGAAGTAC	GACGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGCGAGGATGGAAGTACGACGGCTACTTCTACGGTATGGACGTC	ARDPRGWKYDGYFYGMDV	232	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	117	21	14	1	6	66.7
FR3-IMGT	118	231	114	108	6	0	94.7
CDR3-IMGT (germline)	232	239	8	8	0	0	100
Total	N/A	N/A	245	231	8	6	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5500   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCAATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   ...................................C......................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S        W  S  T  N  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_5500   91   TGGATTGGGTATATCTCTT------GGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCAGCATTTCAGTAGACACGTCCAAGAAT  174
V  94.3% (231/245)  IGHV4-59*01  139  ................A..ACAGTG.......................................C...A....................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  R  G  W  K  Y  D  G 
                    Query_5500   175  CAGTTCTCCCTGAAGCTTAACTCTGTGACCGCAGCGGACACGGCCGTGTATTACTGTGCGAGAGATCCGCGAGGATGGAAGTACGACGGC  264
V  94.3% (231/245)  IGHV4-59*01  229  .................G.G............T................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (8/9)      IGHD1-7*01   9    ---------------------------------------------------------------------------.....C...------  17
J  98.2% (54/55)    IGHJ6*02     8    -----------------------------------------------------------------------------------------.  8

                                      -------------------->                                 
                                       Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5500   265  TACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  98.2% (54/55)    IGHJ6*02     9    ....A.................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_217000

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           349     3e-98
IGHD3-16*01                                                                                           14.1    8.9  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GAGGGCTCGCGGCGTCACTTTTTATTTTAA	TTTGGGG	ACTTCTGGAGGA	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAGGGCTCGCGGCGTCACTTTTTATTTTAATTTGGGGACTTCTGGAGGATGGTTCGACCCC	ARGRARGVTFYFNLGTSGGWFDP	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5501   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGCTCCTTCAGTGGTTACTACTGGAACTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.5% (234/245)  IGHV4-34*01  49   ................................G......................G..................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  T  T  N  S  N  P  S  L  T  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5501   91   TGGATTGGCGAAATCAATCATAGTGGAACCACCAACTCCAACCCGTCGCTCACGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-34*01  139  ........G...................G........A.........C....A.....................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  V  S  L  N  L  R  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  G  R  A  R  G  V  T  F  Y 
                    Query_5501   181  CAGGTCTCCCTGAACCTGCGCTCTGTGACCGCCGCGGACACGGCTATGTATTACTGTGCGAGAGGGAGGGCTCGCGGCGTCACTTTTTAT  270
V  95.5% (234/245)  IGHV4-34*01  229  ...T..........G...A..........................G...................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      3-IMGT----------------------------->                                  
                                       F  N  L  G  T  S  G  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5501   271  TTTAATTTGGGGACTTCTGGAGGATGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  100.0% (7/7)     IGHD3-16*01  15   -----.......----------------------------------------------------------  21
J  100.0% (46/46)   IGHJ5*02     6    ------------------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_189186

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     3e-98
IGHD5-12*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CATCC	GTGGATATGGTG	CTCCTGGGACGCAAGTTGT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACATCCGTGGATATGGTGCTCCTGGGACGCAAGTTGTCTACGGAATGGACGTC	ARDIRGYGAPGTQVVYGMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  A  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5502   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCACTAGTGCTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   .............................T..........GC....G...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  Q  S  R  I  T  I  S  Q  D  K  S 
                    Query_5502   91   CTGGAGTGGATTGGATACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCCAGAGTCGAATTACCATATCACAAGACAAGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ..............G..........................................A........G...........GT.....C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  I  R  G  Y  G  A 
                    Query_5502   181  AAGAACCAGTTCTCCCTGAACCTGAGCTCTGTGACGGCCGCGGACACGGCCGTATATTACTGTGCGAGGGACATCCGTGGATATGGTGCT  270
V  94.4% (237/251)  IGHV4-31*03  229  ....................G..............T.................G..............A..-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD5-12*01  1    ----------------------------------------------------------------------------........A...--  12

                                      DR3-IMGT------------------------>                                 
                                       P  G  T  Q  V  V  Y  G  M  D  V  W  G  H  G  T  R  V  T  V  S  S 
                    Query_5502   271  CCTGGGACGCAAGTTGTCTACGGAATGGACGTCTGGGGCCACGGGACCAGGGTCACCGTCTCCTCA  336
J  93.9% (46/49)    IGHJ6*02     14   -----------------......T.................A.......C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_247306

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD1-26*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCATACGCC	GTGGGAG	GAAGGGATACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATACGCCGTGGGAGGAAGGGATACCCCTTGACTAC	AKDHTPWEEGIPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  L  S  R  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5503   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCATGCTTAGCAGATTTGCCATGAGTTGGGTCCGCCAGGCCCCTGGGAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-23*01  47   ............................T.......CCT.......C.A.........C..............T..A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  D  N  T  Y  Y  A  D  S  L  K  G  Q  F  S  I  S  R  D  S  S  
                    Query_5503   91   AGTGGGTCTCAGGTATCAGCGGAAGTGGTGATAACACATATTATGCAGACTCCTTGAAGGGCCAGTTCTCCATCTCCAGAGACAGTTCCA  180
V  91.2% (228/250)  IGHV3-23*01  137  ............C...T..T..T.......G..G......C..C.........G.........G....A...............A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  H  T  P  W  E  E  
                    Query_5503   181  AGAACACGCTGTATCTGCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCATACGCCGTGGGAGGAAG  270
V  91.2% (228/250)  IGHV3-23*01  227  ......................G...............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD1-26*01  7    -------------------------------------------------------------------------------.......----  13

                                      ---------------->                                  
                                      G  I  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5503   271  GGATACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_277775

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            324     8e-91
IGHD2-15*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACA	GTGGTAG	GAGGAATCAGGCCCTCGCAAC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACAGTGGTAGGAGGAATCAGGCCCTCGCAACTTGACTAC	ARTVVGGIRPSQLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  S  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5504   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTCTTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (227/247)  IGHV3-7*03   47   .............................................G..A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  E  A  G  N  E  R  N  F  V  D  S  M  K  G  R  L  T  I  S  R  D  N  A  
                    Query_5504   91   AGTGGGTGGCCAACATAAACGAGGCTGGAAATGAGAGAAACTTTGTTGACTCTATGAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  91.9% (227/247)  IGHV3-7*03   137  ...................GC.A.A.....G.....A.T...A...G......G...........T........................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  K  S  L  Y  L  Q  M  H  S  L  R  G  E  D  T  G  V  Y  Y  C  A  R  T  V  V  G  G  I  R  
                    Query_5504   181  AGAAGTCACTGTATCTGCAAATGCACAGCCTGAGAGGCGAAGACACGGGCGTTTATTACTGTGCGAGGACAGTGGTAGGAGGAATCAGGC  270
V  91.9% (227/247)  IGHV3-7*03   227  ....C..................A............C...G.......C...G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-15*01  15   -----------------------------------------------------------------------.......------------  21

                                      ---------------->                                  
                                      P  S  Q  L  D  Y  W  G  Q  G  T  L  V  T  V  S  T  
                    Query_5504   271  CCTCGCAACTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCACAG  321
J  97.6% (41/42)    IGHJ4*02     7    ---------......................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_330865

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           318     6e-89
IGHD4-4*01                                                                                            14.1    8.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACAGAGGA	GACTACA	AGCGGCGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACAGAGGAGACTACAAGCGGCGGCTTTGACTAC	ARTEETTSGGFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  G  A  S  G  F  T  F  K  T  Y  D  M  N  W  V  R  Q  P  P  G  K  G  L  
                    Query_5505   1    GGTCCCTGAGACTCTCCTGTGGAGCCTCAGGATTTACCTTCAAAACTTATGATATGAACTGGGTCCGGCAGCCTCCAGGGAAGGGGCTGG  90
V  91.1% (225/247)  IGHV3-48*03  47   .....................C......T.....C.......GT.G......A..............C...G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  G  G  S  T  I  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5505   91   AGTGGATTTCATACATTAGTAGTGGTGGTAGTACCATTTACTACTCAGACTCTGTGAAGGGACGATTCACCATCTCTAGAGACAACGCCA  180
V  91.1% (225/247)  IGHV3-48*03  137  .....G.................A.............A......G................C..............C.............  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      R  N  L  L  Y  L  Q  M  N  S  L  R  P  D  D  T  A  V  Y  Y  C  A  R  T  E  E  T  T  S  G  
                    Query_5505   181  GGAATTTACTGTATCTCCAAATGAACAGCCTGAGACCCGACGACACGGCTGTCTATTACTGTGCGAGGACAGAGGAGACTACAAGCGGCG  270
V  91.1% (225/247)  IGHV3-48*03  227  A...C.C.........G..................G....G...........T..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD4-4*01   2    ----------------------------------------------------------------------------.......-------  8

                                      ---------->                                  
                                      G  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_5505   271  GCTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  315
J  97.7% (43/44)    IGHJ4*02     5    -......................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_277774

Length=417
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            441     6e-126
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	292	360	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	70	5	0	93.3
CDR1-IMGT	79	102	24	24	0	0	100
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	113	1	0	99.1
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	289	7	0	97.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_5506   4    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACC  93
V  97.6% (289/296)  IGHV1-2*04   1    .....G.....G...........G.............AG...................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 
                    Query_5506   94   GGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAATCCTAACAGTGGTGGCACAAACTAT  183
V  97.6% (289/296)  IGHV1-2*04   91   .................................................................C........................  180
                                       G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 
                    Query_5506   184  GCACAGAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGAC  273
V  97.6% (289/296)  IGHV1-2*04   181  ..........................................................................................  270
                                       A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                      -----------------><-----------------------------CDR3-IMGT----------------------------->   
                                       T  A  V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W 
                    Query_5506   274  ACGGCCGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGG  363
V  97.6% (289/296)  IGHV1-2*04   271  .............A............----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.7% (18/19)    IGHD3-22*01  7    --------------------------------------...........G.......---------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ---------------------------------------------------------------....A......................  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_5506   364  GGCCAAGGGACCACGGTCACCGTCTCCTCA  393
J  98.2% (56/57)    IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40919688


Query= Query_60999

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           321     7e-90
IGHJ4*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	N/A	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCACA	N/A	N/A	ACTTTCCGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAACTTTCCGCTTC	PQLSAS	286	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	61	9	0	87.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	172	30	20	7	3	66.7
FR3-IMGT	173	285	114	96	17	1	84.2
CDR3-IMGT (germline)	286	291	6	6	0	0	100
Total	N/A	N/A	295	254	37	4	86.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  G  R  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  A
                    Query_5507   1    GCAGCTGGTGCAGTCTGGAGGAGGCTTAGTAGGGCGGGGGGGGTCTCTTAGACTCTCTTGTGCAGCCTCTGGATTCACTTTCAGTAAGGC  90
V  86.1% (254/295)  IGHV3-15*01  6    ..........G.......G........G...AA..CT........C...........C.............................C..  95
                                        Q  L  V  E  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A

                                      ---><--------------------FR2-IMGT---------------------><----------CDR2-IMGT---------><----
                                        W  M  T  W  V  R  Q  A  P  G  K  G  P  E  W  V  G  L  I  K   K  K  E  K  A  R  Q     C  
                    Query_5507   91   CTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGGAGTGGGTTGGCCTTATTAAAA-AAAAGGAGAAGGCGAGACAA---TGTA  176
V  86.1% (254/295)  IGHV3-15*01  96   ........G.............................T..............G........GC...ACT..T..T.G.....CAGAC..  185
                                        W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y

                                      ------------------------------------------------FR3-IMGT----------------------------------
                                      M  L  *  P  *  R  T  D  S  P  S  Q  E  M  T  Q  Q  T  R  Y  I  W  K  *  A  T  *  E  P  T  
                    Query_5507   177  TGCTGTAGCCGTGAAGGACAGATTCACCATCTCAAGAGATGACTCAACAAACACGGTATATCTGGAAATGAGCAACCTGAGAACCGACGA  266
V  86.1% (254/295)  IGHV3-15*01  186  C....C.C.......A.G........................T....A.......C.G......C......A..G.....A......G..  275
                                        A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D

                                      ------------------><----CDR3-IMGT--->                                  
                                      T  Q  P  C  I  I  V  P  Q  L  S  A  S  G  A  R  E  *  W  S  P  S  P  Q 
                    Query_5507   267  CACAGCCGTGTATTATTGTACCACAACTTTCCGCTTCTGGGGCCAGGGAATGATGGTCACCGTCTCCTCAG  337
V  86.1% (254/295)  IGHV3-15*01  276  ...............C.........----------------------------------------------  300
                                        T  A  V  Y  Y  C  T  T                                               
J  91.4% (32/35)    IGHJ4*02     14   ------------------------------------..............CCC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_277777

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           258     4e-71
IGHD2-15*01                                                                                           10.3    120  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	ACATAATCCT	GCTGC	CAGAGGGGC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGACATAATCCTGCTGCCAGAGGGGCCAACTGGTTCGGCCTC	ARGHNPAARGANWFGL	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	48	24	19	2	3	79.2
FR2-IMGT	49	99	51	44	7	0	86.3
CDR2-IMGT	100	120	21	18	3	0	85.7
FR3-IMGT	121	234	114	95	19	0	83.3
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	245	207	35	3	84.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  D  F  Y  G  G  S  F     D  S  Y  W  N  W  V  R  Q  T  P  G  K  G  L  E 
                    Query_5508   1    ACCCTGTCCCTCACCTGCGATTTTTATGGTGGGTCCTT---TGATTCCTACTGGAATTGGGTCCGCCAGACTCCAGGGAAGGGGCTGGAG  87
V  84.5% (207/245)  IGHV4-34*01  49   ...................C.G.C..............CAG..G..A........GC...A........C.C..................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  N  R  A  G  S  T  N  F  N  P  S  L  E  S  R  L  T  I  S  V  D  T  S  T  K 
                    Query_5508   88   TGGATTGCAGAAATCAATCGTGCTGGAAGCACCAACTTCAATCCGTCCCTCGAGAGTCGACTCACCATTTCAGTGGACACGTCCACGAAG  177
V  84.5% (207/245)  IGHV4-34*01  139  .......GG..........A.AG..............A...C.........A........G.......A.....A..........A...C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       R  F  S  L  R  L  N  S  L  N  A  A  D  T  G  V  Y  Y  C  A  R  G  H  N  P  A  A  R  G  A 
                    Query_5508   178  CGATTCTCCCTGAGGCTAAATTCTCTTAACGCCGCAGACACGGGTGTGTATTACTGTGCGCGAGGACATAATCCTGCTGCCAGAGGGGCC  267
V  84.5% (207/245)  IGHV4-34*01  229  .AG..........A...G.GC...G.G.C......G.......C................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (5/5)     IGHD2-15*01  21   ---------------------------------------------------------------------------.....----------  25
J  94.0% (47/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  G  L  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_5508   268  AACTGGTTCGGCCTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  316
J  94.0% (47/50)    IGHJ5*02     3    ..........A..C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_120319

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_5509   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  92.2% (225/244)  IGHV4-59*01  50   .....TCC...A....C.....................A...G...........G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  A  T  I  S  V  D  K  S  K  N  
                    Query_5509   94   GGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGCCACCATATCAGTAGACAAGTCCAAGAACC  183
V  92.2% (225/244)  IGHV4-59*01  140  .......G..................A...............C.................T.................C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  L  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D  
                    Query_5509   184  AGCTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGACG  273
V  92.2% (225/244)  IGHV4-59*01  230  ..T.....C....G.....C..........................G...........G.....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  94.8% (55/58)    IGHJ6*02     5    -------------------------------------------------------------------.....AC................  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_5509   274  TCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  308
J  94.8% (55/58)    IGHJ6*02     28   ........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_60992

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            355     3e-100
IGHD3-16*01                                                                                           12.2    31    
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGGC	GGGGGA	CCTACCGTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGCGGGGGACCTACCGTGTTTGACTAC	ARGGGGPTVFDY	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  S  K  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_5510   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGTAGTAAATGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  96.0% (237/247)  IGHV4-4*02   49   ...............................G..................C.......G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  Y  H  S  G  S  S  N  Y  S  P  S  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_5510   91   GAGTGGATTGGGGATATCTATCATAGTGGGAGCTCCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  96.0% (237/247)  IGHV4-4*02   139  ..............A..................A.........A..........A...................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  G  P  T  V  F 
                    Query_5510   181  AATCAGTTCTCCCTGAAGCTGACATCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCGGCGGGGGACCTACCGTGTTT  270
V  96.0% (237/247)  IGHV4-4*02   229  ..C...................GC...........................................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------------......------------  23
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5510   271  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (43/43)   IGHJ4*02     9    ........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_60993

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         324     8e-91
IGHD3-9*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCTGCAGATCACC	ATATTTTGACTGGTTA	CTTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCTGCAGATCACCATATTTTGACTGGTTACTTTACTAC	AGCRSPYFDWLLYY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  S  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5511     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCCTTCAGCAGCTCTGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGG  90
V  92.2% (226/245)  IGHV3-30-3*01  47   ...................................A.......T....A....................................G....  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  I  I  S  H  D  G  N  E  K  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_5511     91   AGTGGGTGGCAATCATTTCACATGATGGAAACGAAAAGTACTACGCAGATTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.2% (226/245)  IGHV3-30-3*01  137  ...........G.T..A...T.........G.A.T..A...........C.......A................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                        N  N  T  L  Y  V  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  G  C  R  S  P  Y  F  D  
                    Query_5511     181  ACAATACGCTGTATGTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTACTTCTGTGCGGGCTGCAGATCACCATATTTTGACT  270
V  92.2% (226/245)  IGHV3-30-3*01  227  .G..C.........C........................................T.A.......-------------------------  291
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (16/16)   IGHD3-9*01     9    -------------------------------------------------------------------------------...........  19

                                        ------------->                                  
                                        W  L  L  Y  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_5511     271  GGTTACTTTACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
D  100.0% (16/16)   IGHD3-9*01     20   .....-------------------------------------------  24
J  97.4% (38/39)    IGHJ4*02       10   ---------..................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_60990

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            332     3e-93
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCCCA	GACTGCGGTGACTAC	GTCG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCCCAGACTGCGGTGACTACGTCGTACTTTGACAAC	ARDPQTAVTTSYFDN	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5512   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAACTATTGGATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-7*01   47   .............................................G...........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  L  G  Q  D  G  S  E  F  Y  Y  V  D  S  V  K  A  R  F  T  I  S  R  D  N  A  
                    Query_5512   91   AGTGGGTGGCCAGTTTAGGTCAAGATGGGAGTGAGTTTTACTATGTGGACTCTGTGAAGGCCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-7*01   137  ............ACA..AAG........A......AAA......................G.............................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  R  D  P  Q  T  A  V  T  
                    Query_5512   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGCGAGTCGAGGACACGGCTGTGTACTTCTGTGCGAGAGACCCCCAGACTGCGGTGACTA  270
V  92.4% (231/250)  IGHV3-7*01   227  ....C...........................A...C..................T.A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD4-17*01  2    ----------------------------------------------------------------------------....A.........  15

                                      ---------------->                                  
                                      T  S  Y  F  D  N  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_5512   271  CGTCGTACTTTGACAACTGGGGCCAGGGAACCCCGGTCACCGTCTCGTCAG  321
D  93.3% (14/15)    IGHD4-17*01  16   .--------------------------------------------------  16
J  93.5% (43/46)    IGHJ4*02     3    -----.........T..................T............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_277776

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           403     1e-114
IGHD3-10*01                                                                                           12.2    37    
IGHJ2*01                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGACCGCAGAGATGGCAAAA	TTCGGG	TG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGACCGCAGAGATGGCAAAATTCGGGTGTACTGGTACTTCGGTCTC	ARGDRRDGKIRVYWYFGL	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_5513   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCAGGAGGCACCTTCAGCAGCTA  90
V  94.5% (274/290)  IGHV1-69*06  6    ..................G..................................................T....................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  V  P  V  L  R  T  A  N  Y  A  Q
                    Query_5513   91   TGTTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGGGGATCGTCCCTGTCCTTCGTACAGCGAACTACGCACA  180
V  94.5% (274/290)  IGHV1-69*06  96   ..C.....G..........................................A......A.....A..T..G.......A...........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  T  A  D  K  S  R  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_5513   181  GAAGTTCCAGGACAGAGTCACGATCACCGCGGACAAATCCAGGAGTACGGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  94.5% (274/290)  IGHV1-69*06  186  ...........G............T................C...C..A.C.......................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  G  D  R  R  D  G  K  I  R  V  Y  W  Y  F  G  L  W  G  R  G  T  L  V  T
                    Query_5513   271  CGTGTATTACTGTGCGAGAGGAGACCGCAGAGATGGCAAAATTCGGGTGTACTGGTACTTCGGTCTCTGGGGCCGTGGCACCCTGGTCAC  360
V  94.5% (274/290)  IGHV1-69*06  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-10*01  13   -----------------------------------------......-------------------------------------------  18
J  96.2% (50/52)    IGHJ2*01     2    -------------------------------------------------.............A...........................  42

                                                 
                                        V  S  S  
                    Query_5513   361  CGTCTCCTCAG  371
J  96.2% (50/52)    IGHJ2*01     43   T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_60997

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           355     4e-100
IGHD1-26*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCGAGG	GGTATGGTGGAATCCACTAC	ATTTCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCGAGGGGTATGGTGGAATCCACTACATTTCATACTACTTTGACTAC	ARGEGYGGIHYISYYFDY	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	257	30	0	89.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  P  E  V  K  E  P  G  A  S  V  K  V  S  C  K  A  S  G  F  S  L  T  N  Y 
                    Query_5514   2    CAGCTGGTGCAGTCTGGACCTGAGGTGAAGGAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTTCAGCTTGACCAACTAT  91
V  89.5% (257/287)  IGHV1-18*01  7    ..................G...........A..........................................A..C...T....G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  L  T  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  N  S  S  Y  D  G  N  T  D  Y  A  Q 
                    Query_5514   92   GGTCTCACCTGGGTGCGTCAGGCCCCTGGACAAGGGCTTGAGTGGCTGGGGTGGAACAGCTCTTATGACGGTAACACAGACTATGCACAG  181
V  89.5% (257/287)  IGHV1-18*01  97   ...A...G.........A...........................A....A....T....G....CA.T.........A...........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  I  M  T  R  D  I  S  T  N  T  A  Y  M  A  L  R  S  L  E  S  D  D  T  A 
                    Query_5514   182  AAACTCCAGGGCAGAGTTATTATGACCAGAGACATATCCACGAACACAGCCTACATGGCACTGCGGAGCCTGGAATCTGACGACACGGCC  271
V  89.5% (257/287)  IGHV1-18*01  187  ..G..............C.CC.......C.....C........G..............AG...A........AG................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  G  E  G  Y  G  G  I  H  Y  I  S  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T 
                    Query_5514   272  GTATATTACTGTGCGAGGGGCGAGGGGTATGGTGGAATCCACTACATTTCATACTACTTTGACTACTGGGGCCAGGGAACCCTTGTCACC  361
V  89.5% (257/287)  IGHV1-18*01  277  ..G..............-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  80.0% (16/20)    IGHD1-26*01  1    -------------------------.....A....G.G.T.....---------------------------------------------  20
J  97.9% (47/48)    IGHJ4*02     1    ----------------------------------------------------...............................G......  38

                                                
                                       V  S  S  
                    Query_5514   362  GTCTCCTCAG  371
J  97.9% (47/48)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_60994

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           315     5e-88
IGHD6-19*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GTATAGCAGTGGCTGG	CGTAGCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTATAGCAGTGGCTGGCGTAGCCCCTTTGACTCC	ARYSSGWRSPFDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	49	2	0	96.1
CDR2-IMGT	100	123	24	22	2	0	91.7
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	229	215	14	0	93.9


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  R  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  
                    Query_5515   14   GTGCAGCCTCTGGATTCAGGTTCAGCGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCCTCCATTA  103
V  93.9% (215/229)  IGHV3-11*01  65   ..................CC.....T........................................................A.A.....  154
                                         A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  R  G  S  T  M  Y  Y  A  D  S  M  K  G  R  F  T  I  S  R  D  N  A  E  N  S  L  S  L  
                    Query_5515   104  GTAGTCGTGGTAGTACCATGTACTACGCAGACTCTATGAAGGGCCGATTCACCATCTCCAGGGACAACGCCGAGAACTCACTGTCTCTAC  193
V  93.9% (215/229)  IGHV3-11*01  155  .....A.............A...............G...................................A............A...G.  244
                                      S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><--------------CDR3-IMGT-------------->       
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Y  S  S  G  W  R  S  P  F  D  S  W  G  
                    Query_5515   194  AAATGAATAGCCTGAGAGCCGAAGACACGGCCGTGTATTATTGTGCGAGGTATAGCAGTGGCTGGCGTAGCCCCTTTGACTCCTGGGGCC  283
V  93.9% (215/229)  IGHV3-11*01  245  .......C..............G.................C........-----------------------------------------  293
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (16/16)   IGHD6-19*01  3    -------------------------------------------------................-------------------------  18
J  97.7% (43/44)    IGHJ4*02     5    -------------------------------------------------------------------------........A........  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_5515   284  AGGGAACCCTGGTCACCGTCTCCTCAG  310
J  97.7% (43/44)    IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_189183

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           355     3e-100
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_5516   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGCC  93
V  96.0% (237/247)  IGHV4-31*02  50   .....TCC...A.....................C......C.............................C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_5516   94   TGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  96.0% (237/247)  IGHV4-31*02  140  ....G.........T.C.........................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  
                    Query_5516   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCG  273
V  96.0% (237/247)  IGHV4-31*02  230  ...................................................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  100.0% (51/51)   IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5516   274  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (51/51)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_22765

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5517   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (226/248)  IGHV3-21*01  47   ............................T............AG...C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  G  
                    Query_5517   91   AGTGGGTCTCATCCATCAGTAGTAGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  91.1% (226/248)  IGHV3-21*01  137  ................T........T...AGT......T.C..C..A......G..A..............................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_5517   181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  91.1% (226/248)  IGHV3-21*01  227  ....C..................AA...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5517   271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_22764

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         339     2e-95
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	N/A	N/A	TCACCTGCCAACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGATCACCTGCCAACCCCTACTACCACGCTCTGGACGTC	ARSPANPYYHALDV	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  V  Y  I  S  N  G  G  Y  S  W  T  W  I  R  Q  P  P  G  R  G 
                    Query_5518     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTACATCAGCAATGGTGGTTACTCCTGGACCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  93.6% (233/249)  IGHV4-30-2*01  49   ..................G............G..C........G.................G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Q  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  R  S 
                    Query_5518     91   CTGGAGTGGATTGGGTACATCTATCAAAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGCGTCACCATATCGGTAGACAGGTCC  180
V  93.6% (233/249)  IGHV4-30-2*01  139  ..........................T...............................A......A...........A............  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  V  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  A  N  P  Y  Y 
                    Query_5518     181  AAGAACCAGTTCTCCGTTAACTTGAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGATCACCTGCCAACCCCTACTAC  270
V  93.6% (233/249)  IGHV4-30-2*01  229  ...............C.G..GC....C..........................G...............---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  92.7% (51/55)    IGHJ6*02       8    -----------------------------------------------------------------------------------.......  14

                                        -------------->                                 
                                         H  A  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5518     271  CACGCTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  318
J  92.7% (51/55)    IGHJ6*02       15   T...G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_22763

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         288     5e-80
IGHD2-2*01                                                                                            19.9    0.15 
IGHJ5*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	TGGGGCCT	TACCAGGTGCTAT	CACTTGGCA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGTGGGGCCTTACCAGGTGCTATCACTTGGCACC	ATVGPYQVLSLGT	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	12	9	0	57.1
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  G  S  M  N  T  D  G  Y  S  W  G  W  I  R  Q  P  P  G  Q  G 
                    Query_5519     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAACACTGATGGATACTCTTGGGGCTGGATCCGGCAGCCGCCAGGGCAGGGC  90
V  86.8% (217/250)  IGHV4-30-2*01  49   ..................G...................C.G..G..G...T.....C...A................A......A.....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  F  G  L  D  T  A  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 
                    Query_5519     91   CTGGAGTGGATTGGCTTCGGCTTAGACACTGCGAACACCTACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCGGTGGACAGGTCC  180
V  86.8% (217/250)  IGHV4-30-2*01  139  ..............G.A.AT..ATC.T.G..G..G...............G.......................A..A..A.........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         K  K  D  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  V  G  P  Y  Q  V  L 
                    Query_5519     181  AAGAAGGACTTCTCCCTGAAGCTAGCCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCCACAGTGGGGCCTTACCAGGTGCTA  270
V  86.8% (217/250)  IGHV4-30-2*01  229  .....CC.G..............GAG...........................G.............G..--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD2-2*01     16   ------------------------------------------------------------------------------......C.....  27

                                        ----------->                                  
                                         S  L  G  T  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_5519     271  TCACTTGGCACCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  316
D  92.3% (12/13)    IGHD2-2*01     28   .---------------------------------------------  28
J  97.2% (35/36)    IGHJ5*02       16   ----------...............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_293479

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            352     3e-99
IGHD6-19*01                                                                                           21.8    0.039
IGHJ4*01                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	N/A	GCAGTGGCTGG	CTGTCGGAGTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ATGGGAGGCAGTGGCTGGCTGTCGGAGTTC	MGGSGWLSEF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	4	3	0	57.1
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  S  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5520   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACCTTTAATTCCTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-7*01   47   ...............................A..........G.AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  H  Q  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5520   91   AGTGGGTGGCCAACATACACCAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (237/249)  IGHV3-7*01   137  .................A.G..................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  M  G  G  S  G  W  L  S  E  
                    Query_5520   181  AGAACTCACTGTATCTGCAAATGAACACCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTATGGGAGGCAGTGGCTGGCTGTCGGAGT  270
V  95.2% (237/249)  IGHV3-7*01   227  ...........................G..................................GC.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-19*01  8    ---------------------------------------------------------------------...........----------  18

                                      ->                                  
                                      F  W  G  H  G  T  L  V  T  V  S  S  
                    Query_5520   271  TCTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.1% (34/35)    IGHJ4*01     14   -.........A.........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_22761

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHD1-26*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGCCCGCTGCTCGTG	GTGGGAGCTA	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATCAGCCCGCTGCTCGTGGTGGGAGCTATGACTAC	ARDQPAARGGSYDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5521   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATACCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGC  90
V  96.0% (240/250)  IGHV3-74*01  47   ..........................................G..G...........................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      L  W  V  S  R  I  N  T  V  G  T  D  I  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5521   91   TGTGGGTCTCACGTATTAATACTGTTGGGACTGACATAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-74*01  137  .....................G..A.....G.AG..C.....................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Q  P  A  A  R  G  
                    Query_5521   181  AGAACACGCTGTATCTGCAAATGGACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGATCAGCCCGCTGCTCGTGGTG  270
V  96.0% (240/250)  IGHV3-74*01  227  .......................A..............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD1-26*01  7    ---------------------------------------------------------------------------------------...  9

                                      ------------->                                  
                                      G  S  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5521   271  GGAGCTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (10/10)   IGHD1-26*01  10   .......-----------------------------------------  16
J  100.0% (41/41)   IGHJ4*02     8    -------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_293474

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         307     1e-85
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAG	G	TCGGGGAG	ACGCGGTATCCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGGTCGGGGAGACGCGGTATCCCCCTTTGAATAC	AKGRGDAVSPFEY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  T  Y  G  F  H  C  S  W  I  R  Q  P  P  G  K  G 
                    Query_5522     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCACCTATGGTTTCCACTGCAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  89.2% (223/250)  IGHV4-30-4*01  49   ..................A........................GTGG..A..A.T....G..............................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  S  Y  S  G  N  T  Y  Y  N  P  S  L  R  G  R  G  A  M  S  L  D  T  S 
                    Query_5522     91   CTGGAGTGGATTGGGTACATCTCTTACAGTGGGAATACCTACTACAACCCGTCCCTCAGGGGTCGAGGTGCCATGTCACTAGACACGTCC  180
V  89.2% (223/250)  IGHV4-30-4*01  139  ......................A...........GC......................A.A......T.A....A...G...........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         E  N  R  V  S  L  T  V  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  G  R  G  D  A  V  S 
                    Query_5522     181  GAGAACCGGGTCTCCCTGACGGTGAACTCTGTGACTGCCGCAGACACGGCCGTATATTTCTGTGCCAAAGGTCGGGGAGACGCGGTATCC  270
V  89.2% (223/250)  IGHV4-30-4*01  229  A......A.T.........A.C...G...........................G....A........G..--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-10*01    14   -----------------------------------------------------------------------........-----------  21

                                        ----------->                                
                                         P  F  E  Y  W  G  Q  G  A  L  V  T  V  S  S
                    Query_5522     271  CCCTTTGAATACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTC  314
J  95.2% (40/42)    IGHJ4*02       5    --......C...............A...................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_293476

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            397     8e-113
IGHD2-15*01                                                                                           10.3    133   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	AGGAT	TGTTGG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAGGATTGTTGGTGACTTC	ARDRIVGDF	292	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	70	5	0	93.3
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	103	11	0	90.4
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	275	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  R  A  S  G  Y  T  F  T 
                    Query_5523   4    CAGATGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTTTCCTGCAGGGCTTCTGGATACACCTTCACT  93
V  92.9% (275/296)  IGHV1-3*01   1    ...G.C.....T...........................................A...........A......................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  A  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  A  G  T  G  N  T  K  S 
                    Query_5523   94   GACTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAGGCCTTGAGTGGATGGGATGGATCAACGCTGGCACTGGTAACACAAAGTCT  183
V  92.9% (275/296)  IGHV1-3*01   91   AG.....................................A.G...............................A............A.A.  180
                                       S  Y  A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  R  F  Q  G  R  V  T  F  S  R  D  K  F  A  N  T  A  Y  M  E  L  S  S  L  S  S  E  D 
                    Query_5523   184  GCACAGAGGTTCCAGGGCAGAGTCACCTTTTCCAGGGACAAATTCGCGAACACAGCCTACATGGAGCTGAGCAGCCTGAGTTCTGAAGAC  273
V  92.9% (275/296)  IGHV1-3*01   181  T......A...................A..A.........C..C.....G..............................A.........  270
                                       S  Q  K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------CDR3-IMGT-------->                                  
                                       T  A  V  Y  Y  C  A  R  D  R  I  V  G  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5523   274  ACGGCTGTCTATTACTGTGCGAGAGACAGGATTGTTGGTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  352
V  92.9% (275/296)  IGHV1-3*01   271  ........G.................-----------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                        
D  100.0% (5/5)     IGHD2-15*01  1    ---------------------------.....-----------------------------------------------  5
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_293470

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	272	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_5524   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  95.1% (272/286)  IGHV5-51*01  6    ..................................................A...............T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  Y  S  D  T  R  Y  S  P
                    Query_5524   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCTTGGAGTTGATGGGGATCATCTATCCTGGTTACTCTGACACCAGATACAGTCC  180
V  95.1% (272/286)  IGHV5-51*01  96   ......................A.......G......C......G......................G.......T...........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  N  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_5524   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  95.1% (272/286)  IGHV5-51*01  186  ....................C...................A...G.......................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        M  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  P  G  T  L  V  T  V  S  S 
                    Query_5524   271  CATGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCA  352
V  95.1% (272/286)  IGHV5-51*01  276  ................------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                   
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     8    ------------------------------------------..............A.........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_293471

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           330     1e-92
IGHD1-1*01                                                                                            14.1    7.9  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	246	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	250	5	3	2	0	60
Total	N/A	N/A	247	229	18	0	92.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G  
                    Query_5525   4    CCCTGAGACTCTCCTGTACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  92.7% (229/247)  IGHV4-39*01  50   .....TCC...A....C.....C.....................AG..............G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S  
                    Query_5525   94   TGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCCA  183
V  92.7% (229/247)  IGHV4-39*01  140  ....................T..........................C.........A..................C.............  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G  
                    Query_5525   184  AGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGCC  273
V  92.7% (229/247)  IGHV4-39*01  230  .................A.......C................................C...G.G..-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD1-1*01   9    -------------------------------------------------------------------.......----------------  15
J  100.0% (38/38)   IGHJ4*02     10   ------------------------------------------------------------------------------............  21

                                                                
                                      Q  G  T  L  V  T  V  S  S 
                    Query_5525   274  AGGGAACCCTGGTCACCGTCTCCTCA  299
J  100.0% (38/38)   IGHJ4*02     22   ..........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_293472

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            332     3e-93
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-16*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CTAAGC	TTATGACTACG	AAGACAGCGCCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCTAAGCTTATGACTACGAAGACAGCGCCCCTGACTAC	A*AYDYEDSAPDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5526   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAGTAGTTATTGGATGACCTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  93.4% (228/244)  IGHV3-7*03   47   .....................C........................C..........G...............T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  G  T  H  Y  L  D  S  L  G  G  R  F  T  I  S  R  D  N  A  
                    Query_5526   91   AGTGGGTGGCCAACATAAAACAAGATGGAAGTGGGACACACTATCTGGACTCTCTGGGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.4% (228/244)  IGHV3-7*03   137  ...................G.............A..A.T.....G........G..AA................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  S  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  *  A  Y  D  Y  E  D  S  
                    Query_5526   181  AGAGCTCAGTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCCTAAGCTTATGACTACGAAGACAGCG  270
V  93.4% (228/244)  IGHV3-7*03   227  ...A....C.........................................G.G...........--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.9% (10/11)    IGHD3-16*01  4    ----------------------------------------------------------------------......T....---------  14

                                      ---------->                                  
                                      A  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5526   271  CCCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (41/41)   IGHJ4*02     8    ----.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_22768

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           304     9e-85
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTACTCGGCTG	CGATTTTTGGAGTGGTT	CTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTACTCGGCTGCGATTTTTGGAGTGGTTCTCGACTAC	ARGYSAAIFGVVLDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	218	24	0	90.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  F  S  G  D  S  T  S  G  H  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5527   1    ACCCTGTCCCTCACCTGCACTTTCTCTGGAGACTCCACCAGTGGTCACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.1% (218/242)  IGHV4-59*01  49   .....................G.......T.G.....T....A..T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  T  G  S  T  T  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  A  S  R  N 
                    Query_5527   91   TGGATTGGCTATGTCTATTATACTGGGAGCACCACGTACAACCCCTCCCTCGAGAGTCGAGTCACCATGTCAGTGGACGCGTCCAGGAAC  180
V  90.1% (218/242)  IGHV4-59*01  139  ........G...A.......C.G...........AC...............A................A.....A...A......A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  Y  S  A  A  I  F  G  V 
                    Query_5527   181  CAGTTCTCCCTGAAGTTAAAGTCTGTGACCGCTGCGGACACGGCCGTTTATTATTGTGCGAGGGGCTACTCGGCTGCGATTTTTGGAGTG  270
V  90.1% (218/242)  IGHV4-59*01  229  ...............C.G.GC..........................G.....C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (17/17)   IGHD3-3*01   7    ----------------------------------------------------------------------------..............  20

                                      ----------->                                  
                                       V  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5527   271  GTTCTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (17/17)   IGHD3-3*01   21   ...-------------------------------------------  23
J  100.0% (40/40)   IGHJ4*02     9    ------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_323548

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           325     3e-91
IGHD1-1*01                                                                                            10.3    119  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCCGAGGGTAAA	AACGA	N/A	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCCGAGGGTAAAAACGAACTATTACGGGATGGACGTC	ARGPRVKTNYYGMDV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  D  G  S  I  S  T  N  F  W  S  W  I  R  Q  P  P  G  K  G  L  D 
                    Query_5528   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGATGGCTCCATCAGCACTAACTTCTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAC  90
V  93.0% (225/242)  IGHV4-59*01  49   ..................A.........G............T.G.T...A...........................G...........G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  S  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5528   91   TGGATTGGGTATATCTCTTCCAGTGGAAATACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAT  180
V  93.0% (225/242)  IGHV4-59*01  139  ................A..A......G.GC...........................................................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  V  K  T  N  Y  Y 
                    Query_5528   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTATTGTGCGAGGGGCCCGAGGGTAAAAACGAACTATTAC  270
V  93.0% (225/242)  IGHV4-59*01  229  .............A.................................G.....C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-1*01   12   -----------------------------------------------------------------------------.....--------  16
J  94.3% (50/53)    IGHJ6*02     10   ----------------------------------------------------------------------------------....C...  17

                                      ----------->                                 
                                       G  M  D  V  W  G  L  G  T  T  V  T  V  S  S 
                    Query_5528   271  GGGATGGACGTCTGGGGCCTAGGGACCACGGTCACCGTCTCCTCA  315
J  94.3% (50/53)    IGHJ6*02     18   ..T................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_139305

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           361     5e-102
IGHD3-16*01                                                                                           12.2    35    
IGHJ6*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCC	TTGGGG	CGGC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCTTGGGGCGGCCTACGGTTTGGACGTC	ARPLGAAYGLDV	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	260	29	0	90


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  G  S  L  T  I  S  C  Q  V  S  G  Y  I  F  T  H  Y
                    Query_5529   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCGGGGGGCTCTCTGACGATCTCCTGTCAGGTTTCTGGATACATCTTCACCCACTA  90
V  90.0% (260/289)  IGHV5-51*03  6    ...............................A.........AG.......A..........A...G...........G...T...AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  V  A  G  K  G  L  E  W  M  G  V  I  Y  P  D  D  S  D  A  R  Y  S  P
                    Query_5529   91   TTGGATCGCCTGGGTGCGCCAGGTGGCCGGCAAAGGCCTAGAGTGGATGGGGGTCATCTATCCTGACGACTCTGATGCCAGATACAGCCC  180
V  90.0% (260/289)  IGHV5-51*03  96   C.......G.............A..C....G........G............A............GT.........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  L  V  T  I  S  V  D  K  S  L  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_5529   181  GTCCTTTCAAGGCCTGGTCACCATCTCAGTCGACAAGTCCCTCAGTACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  90.0% (260/289)  IGHV5-51*03  186  ......C.......A..............C..........A....C....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  F  C  A  R  P  L  G  A  A  Y  G  L  D  V  W  G  Q  G  T  A  V  V  V  S  S 
                    Query_5529   271  CATTTACTTCTGTGCGAGACCCCTTGGGGCGGCCTACGGTTTGGACGTCTGGGGCCAAGGGACCGCGGTCGTCGTCTCGTCA  352
V  90.0% (260/289)  IGHV5-51*03  276  ...G..T.A..........---------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                
D  100.0% (6/6)     IGHD3-16*01  16   -----------------------......-----------------------------------------------------  21
J  89.8% (44/49)    IGHJ6*02     14   ---------------------------------.......A.......................A.....AC......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_139304

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         360     1e-101
IGHD1-26*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              56.4    3e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGA	ATAGTGGGAGCTACTA	TTGGGAAGAA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGAATAGTGGGAGCTACTATTGGGAAGAATAC	ARDPNSGSYYWEEY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  P  F  S  S  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5530     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCTTCAGTAGCTATTCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  96.0% (240/250)  IGHV3-30-3*01  47   ...................................A..............G..................................G....  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  M  S  H  D  G  N  N  K  Y  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5530     91   AGTGGGTGGCAGTCATGTCACATGATGGAAACAATAAATACCACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (240/250)  IGHV3-30-3*01  137  .............T..A...T.........G..........T................................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  N  S  G  S  Y  
                    Query_5530     181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTATATTACTGTGCGAGAGATCCGAATAGTGGGAGCTACT  270
V  96.0% (240/250)  IGHV3-30-3*01  227  .......G............................................G.................--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (16/16)   IGHD1-26*01    4    ---------------------------------------------------------------------------...............  18

                                        ------------->                             
                                        Y  W  E  E  Y  W  G  Q  G  S  L  V  T  V  S
                    Query_5530     271  ATTGGGAAGAATACTGGGGCCAGGGATCCCTGGTCACCGTCTC  313
D  100.0% (16/16)   IGHD1-26*01    19   .------------------------------------------  19
J  96.9% (31/32)    IGHJ4*02       12   -----------...............A................  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_139303

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ1*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GACTCATGGGGGCGACTTTCG	ATGATGGTACTGGTTATTAC	C	CTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGGGGGCGACTTTCGATGATGGTACTGGTTATTACCCTGAATACTTCGACCAC	ARLMGATFDDGTGYYPEYFDH	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	224	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  R  F  G  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5531   1    GGTCCCTGAGACTCTCCTGTGCGGGCTCTGGATTCAGGTTTGGCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (224/246)  IGHV3-23*01  47   ......................A.C...........CC...A...............G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  T  I  S  G  S  G  A  S  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  S  D  T  S  
                    Query_5531   91   AGTGGCTCGCAACTATTAGCGGTAGTGGTGCTTCCACATACTACGCAGACTCCGTGAGGGGCCGGTTCACCATCTCCAGCGACACTTCCG  180
V  91.1% (224/246)  IGHV3-23*01  137  .....G..T..G.......T..........G.AG.......................A.....................A....A....A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      A  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  L  M  G  A  T  F  D  
                    Query_5531   181  CGAACACACTGTATTTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTGTATTACTGTGCGAGACTCATGGGGGCGACTTTCGATG  270
V  91.1% (224/246)  IGHV3-23*01  227  A......G......C.....................C...............A.............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.0% (18/20)    IGHD3-22*01  9    ---------------------------------------------------------------------------------------...  11

                                      DR3-IMGT-------------------------->                                  
                                      D  G  T  G  Y  Y  P  E  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5531   271  ATGGTACTGGTTATTACCCTGAATACTTCGACCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  339
D  90.0% (18/20)    IGHD3-22*01  12   ..A...G..........----------------------------------------------------  28
J  96.1% (49/51)    IGHJ1*01     2    ------------------...........C.G.....................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_97479

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  L  G  K  G 
                    Query_5532   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCTAGGGAAGGGC  90
V  97.2% (241/248)  IGHV4-31*03  49   ..................................C......C.............................C.......C..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_5532   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.2% (241/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_5532   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.2% (241/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5532   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_139300

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           321     6e-90
IGHD6-13*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CTC	AGCAGTAGCTGG	CACTG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTCAGCAGTAGCTGGCACTGACTTTGACTAC	ARDSAVAGTDFDY	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	20	6	0	76.9
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	126	24	18	6	0	75
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  V  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  T  P  E  K  G  L  E  
                    Query_5533   2    CCCTGTCCCTCACCTGCGTAGCCTCTGGATTCACCTTCAGTAGTTATGAGATGAACTGGGTCCGCCAGACTCCAGAGAAGGGGCTGGAGT  91
V  91.5% (226/247)  IGHV3-48*03  50   .....AGA...T....T.C..............................A..................G......G..............  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  F  I  S  G  S  G  D  S  K  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  K  
                    Query_5533   92   GGGTTTCATTCATCAGTGGTAGTGGTGATAGCAAATACTACGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCAAGA  181
V  91.5% (226/247)  IGHV3-48*03  140  .........A...T...A........AG..C..T..................................A.....................  229
                                      W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><--------------CDR3-IMGT-------
                                      N  S  V  Y  M  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  A  V  A  G  T  D  
                    Query_5533   182  ACTCAGTGTATATGCAAATGAATAGCCTGAGAGCCGAGGACACAGCTGTTTATTACTGTGCGAGAGACTCAGCAGTAGCTGGCACTGACT  271
V  91.5% (226/247)  IGHV3-48*03  230  .....C.....C..........C....................G.......................-----------------------  296
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  91.7% (11/12)    IGHD6-13*01  7    ----------------------------------------------------------------------.....C......--------  18
J  100.0% (45/45)   IGHJ4*02     4    ---------------------------------------------------------------------------------------...  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5533   272  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (45/45)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_323541

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            343     2e-96
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGATGAA	TCGGGGAG	GCCC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGATGAATCGGGGAGGCCCCTATTATTACTACGGCATGGACGTC	ARVMNRGGPYYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  L  S  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5534   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCCTTAGTAGTTACTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-7*03   47   ...................................A..T.......C..T.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  K  H  Y  V  D  S  V  Q  G  R  F  T  V  S  R  D  N  A  
                    Query_5534   91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGAGAAACACTATGTGGACTCTGTGCAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  94.0% (234/249)  IGHV3-7*03   137  ....................C.................T.................A..............A..................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  I  L  Q  M  S  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  V  M  N  R  G  G  P  
                    Query_5534   181  AGAATTCACTGATTCTGCAAATGAGTAGCCTGAGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGTGATGAATCGGGGAGGCCCCT  270
V  94.0% (234/249)  IGHV3-7*03   227  ....C......TA...........AC..........C................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-10*01  14   ----------------------------------------------------------------------------........------  21
J  94.8% (55/58)    IGHJ6*02     5    ----------------------------------------------------------------------------------------..  6

                                      GT-------------------->                                 
                                      Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5534   271  ATTATTACTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  94.8% (55/58)    IGHJ6*02     7    .C..C........T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_97475

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           279     3e-77
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	44	7	0	86.3
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	216	28	6	86.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_5535   4    CCCTGAGACTCTCCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.4% (216/250)  IGHV4-34*01  50   .....TCC...A..........C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  R  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_5535   94   TGGAATGGATTAGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.4% (216/250)  IGHV4-34*01  134  ....G......G.........A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_5535   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.4% (216/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_5535   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_323543

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           410     1e-116
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ2*01                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGA	TACTATGACAGTAGTGGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTC	ARDGYYDSSGYYYDL	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  S  Y  S  F  S  S  H 
                    Query_5536   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTAGTTACAGTTTTAGCAGCCAC  91
V  95.2% (276/290)  IGHV1-18*04  7    .....................................................................G......CC....C....T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  D  Y  A  R 
                    Query_5536   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGGTGGATCAGCGGTTACAATGGTAACACAGACTATGCACGG  181
V  95.2% (276/290)  IGHV1-18*04  97   ................................A.................A..........C................A.........A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  A  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  T  S  D  D  T  A 
                    Query_5536   182  AAGTTCCAGGGCAGAGTCACCATGACCGCAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGACATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*04  187  ...C.......................A.............................................G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  D  G  Y  Y  D  S  S  G  Y  Y  Y  D  L  W  G  R  G  T  L  V  T  V  S  S 
                    Query_5536   272  GTGTATTACTGTGCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTCTGGGGCCGGGGAACCCTGGTCACTGTCTCCTCA  361
V  95.2% (276/290)  IGHV1-18*04  277  ...............A....----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  95.2% (20/21)    IGHD3-22*01  5    ------------------------........T............---------------------------------------------  25
J  91.3% (42/46)    IGHJ2*01     8    ---------------------------------------------....T...T...........T..C.....................  52

                                       
                                       
                    Query_5536   362  G  362
J  91.3% (42/46)    IGHJ2*01     53   .  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_323544

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           366     2e-103
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCAATCCCGTATACCCCTACCTT	GGGAGTTA	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCAATCCCGTATACCCCTACCTTGGGAGTTATGACTAT	ARANPVYPYLGSYDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	262	28	0	90.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  R  V  S  C  Q  A  S  G  Y  T  F  T  S  N
                    Query_5537   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGTCAGGCATCTGGATACACCTTCACCAGCAA  90
V  90.3% (262/290)  IGHV1-46*01  6    ..................G..........A....................A...T.....CA..........................T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  L  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  N  P  G  G  G  G  T  T  Y  A  Q
                    Query_5537   91   TTATTTGCACTGGGTGCGACAGGCCCCTGGACAAGGTCTTGAGTGGATGGGAGTGATCAACCCTGGTGGTGGAGGCACGACCTACGCACA  180
V  90.3% (262/290)  IGHV1-46*01  96   C...A...............................G...............A.A.........A.......TA....A.G.........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  L  S  I  T  R  D  A  S  T  T  T  V  Y  M  E  L  S  S  L  T  S  E  D  A  A
                    Query_5537   181  GAAGTTCCAGGGCAGACTCTCCATAACTCGGGACGCGTCCACGACCACAGTCTACATGGAGCTGAGCAGCCTGACATCTGAGGACGCGGC  270
V  90.3% (262/290)  IGHV1-46*01  186  ................G..A....G..CA.....A.........G.............................G..........A....  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  A  N  P  V  Y  P  Y  L  G  S  Y  D  Y  W  G  Q  G  T  Q  V  T  V  S  S
                    Query_5537   271  CGTATACTACTGTGCGAGAGCCAATCCCGTATACCCCTACCTTGGGAGTTATGACTATTGGGGCCAGGGAACCCAGGTCACCGTCTCCTC  360
V  90.3% (262/290)  IGHV1-46*01  276  ...G..T.............----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-10*01  17   -------------------------------------------........---------------------------------------  24
J  95.1% (39/41)    IGHJ4*02     8    ---------------------------------------------------......C................T...............  46

                                        
                                        
                    Query_5537   361  AG  362
J  95.1% (39/41)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_323545

Length=414
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            416     2e-118
IGHD4-17*01                                                                                           18.0    0.71  
IGHJ6*02                                                                                              75.7    7e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTCCTCCTATTCCTTTGAT	ACTACTGTGACT	GAGCCGAATGAA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCTCCTCCTATTCCTTTGATACTACTGTGACTGAGCCGAATGAATACTACCAGTACGGCCTGGACGTC	ASSSYSFDTTVTEPNEYYQYGLDV	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	277	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  F  G  Y  S  F  T  G  Y
                    Query_5538   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTAAAGGTATCCTGCAAGGCTTTTGGATACAGCTTCACCGGCTA  90
V  96.2% (277/288)  IGHV1-2*04   6    ..................G.............................G.....C.............C........C............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_5538   91   CTATATGCACTGGGTGCGACAGGCCACTGGACAAGGCCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  96.2% (277/288)  IGHV1-2*04   96   .........................C..........G.....................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  F  I  S  T  A  Y  M  E  L  S  R  H  R  S  D  D  T  A
                    Query_5538   181  GAAATTTCAGGGCTGGGTCACCATGACCAGGGACACGTTCATCAGCACAGCCTACATGGAGCTGAGCAGGCACAGATCTGACGACACGGC  270
V  96.2% (277/288)  IGHV1-2*04   186  ...G..................................C................................TG.................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-------------------------------CDR3-IMGT------------------------------>     
                                        V  Y  Y  C  A  S  S  S  Y  S  F  D  T  T  V  T  E  P  N  E  Y  Y  Q  Y  G  L  D  V  W  G
                    Query_5538   271  CGTGTATTACTGTGCGAGCTCCTCCTATTCCTTTGATACTACTGTGACTGAGCCGAATGAATACTACCAGTACGGCCTGGACGTCTGGGG  360
V  96.2% (277/288)  IGHV1-2*04   276  ..................------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  91.7% (11/12)    IGHD4-17*01  3    -------------------------------------.....G......-----------------------------------------  14
J  89.5% (51/57)    IGHJ6*02     6    -------------------------------------------------------------......T.C.....TA.............  34

                                                                  
                                        Q  G  S  T  V  P  V  S  S 
                    Query_5538   361  CCAAGGGTCCACGGTCCCCGTCTCCTCA  388
J  89.5% (51/57)    IGHJ6*02     35   .......A........A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40604112


Query= Query_323546

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           308     4e-86
IGHD2-2*03                                                                                            14.1    8.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-2*03	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TGGGGAATA	TGGAAATTGT	TA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGTGGGGAATATGGAAATTGTTAACTACTTTGACGCC	VRVGNMEIVNYFDA	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	223	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5539   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACATTCAGTAGTTATTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  89.6% (223/249)  IGHV3-74*01  47   ............................T........C........C..C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  S  T  D  G  T  S  F  S  H  A  D  A  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_5539   91   TGTGGGTCTCACGTATTAGCACTGATGGGACTAGTTTCAGCCACGCGGACGCCGTGAGGGGCCGATTCACCATTTCCAGAGACAATGCCA  180
V  89.6% (223/249)  IGHV3-74*01  137  ..................AT.G........G...CACA...T........T......A...............C...........C....  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  F  L  Q  M  D  N  L  R  A  E  D  T  A  V  Y  Y  C  V  R  V  G  N  M  E  I  V  
                    Query_5539   181  AGAACACCCTCTTTTTGCAAATGGACAATTTGAGAGCCGAGGACACGGCTGTGTATTACTGCGTAAGAGTGGGGAATATGGAAATTGTTA  270
V  89.6% (223/249)  IGHV3-74*01  227  .......G..G.A.C........A...G.C...............................T.C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD2-2*03   1    ------------------------------------------------------------------------------....T.....--  10

                                      ------------->                                  
                                      N  Y  F  D  A  W  G  Q  G  N  L  V  T  V  S  S  
                    Query_5539   271  ACTACTTTGACGCCTGGGGCCAGGGAAACCTGGTCACCGTCTCCTCAG  318
J  93.8% (45/48)    IGHJ4*02     1    ...........TA..............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_97470

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD1-26*01                                                                                           10.3    121   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCGGAAGAA	GGGAG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGGAAGAAGGGAGATTGACTAC	AGGRREIDY	261	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	50	1	0	98
CDR2-IMGT	126	146	21	15	6	0	71.4
FR3-IMGT	147	260	114	110	4	0	96.5
CDR3-IMGT (germline)	261	263	3	3	0	0	100
Total	N/A	N/A	263	248	15	0	94.3


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  T  N  H  Y  W  N  W  I  R  
                    Query_5540   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTAATCACTACTGGAACTGGATCCGGC  90
V  94.3% (248/263)  IGHV4-59*01  26   ................T..............................................G..G.T.........G...........  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  L  Y  Y  N  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  
                    Query_5540   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATCTTTATTACAATGGTGACACCAAGTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  94.3% (248/263)  IGHV4-59*01  116  ...................................A.C.......G...GAG......C...............................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><--------C
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  G  
                    Query_5540   181  TATCAGTTGACACGTCCAAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGGGCGGAA  270
V  94.3% (248/263)  IGHV4-59*01  206  .......A..............................C...............................G............-------  288
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A        

                                      DR3-IMGT-------->                                  
                                      R  R  E  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5540   271  GAAGGGAGATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (5/5)     IGHD1-26*01  9    ---.....-------------------------------------------  13
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_311122

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            357     1e-100
IGHD2-2*01                                                                                            33.4    1e-05 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CT	TATTGTAGTAGTAGCATCTGCTA	CCA	TGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTTATTGTAGTAGTAGCATCTGCTACCATGACCAC	ATYCSSSICYHDH	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	237	9	0	96.3


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  V  T  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5541  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAGTCACCTTTAGTACCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.3% (237/246)  IGHV3-7*01  47   ................................T............G............................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  H  D  G  S  E  K  Y  Y  A  D  S  V  K  G  R  F  A  I  S  R  D  N  A  
                    Query_5541  91   AGTGGGTGGCCAACATAAAGCACGATGGAAGTGAGAAATACTATGCGGACTCTGTGAAGGGCCGATTCGCCATCTCCAGAGACAACGCCA  180
V  96.3% (237/246)  IGHV3-7*01  137  ......................A......................T......................A.....................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                     K  N  S  L  F  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  Y  C  S  S  S  I  C  
                    Query_5541  181  AGAACTCACTGTTTCTGCAAATGAGTAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGACTTATTGTAGTAGTAGCATCTGCT  270
V  96.3% (237/246)  IGHV3-7*01  227  ............A...........AC..........................G.............------------------------  292
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  91.3% (21/23)    IGHD2-2*01  5    --------------------------------------------------------------------.............C..G.....  26

                                     ---------->                                  
                                     Y  H  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5541  271  ACCATGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
D  91.3% (21/23)    IGHD2-2*01  27   .--------------------------------------------  27
J  97.6% (40/41)    IGHJ4*02    8    ----....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_298338

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           330     1e-92
IGHD6-6*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	TC	ATAGCAGTTCGT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACTCATAGCAGTTCGTACTACTATGAGTAC	TTHSSSYYYEY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	232	21	0	91.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  T  W  L  S  W  V  R  Q  D  P  E  K  G  L  
                    Query_5542   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACACCTGGCTGAGCTGGGTCCGCCAGGATCCAGAGAAGGGTCTGG  90
V  91.7% (232/253)  IGHV3-15*01  47   .......T.......................................G.....A..................C.....G......G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      A  W  V  G  R  I  K  S  E  T  H  G  G  T  T  D  Y  P  A  P  V  K  G  R  F  T  V  S  R  D  
                    Query_5542   91   CGTGGGTTGGCCGTATTAAAAGCGAGACTCATGGTGGGACAACAGACTACCCTGCACCCGTGAAAGGCAGATTCACCGTCTCTAGAGATG  180
V  91.7% (232/253)  IGHV3-15*01  137  A......................A.A...G....................G..........................A....A.......  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  D  T  L  Y  L  H  M  N  D  L  K  S  E  D  T  A  V  Y  F  C  T  T  H  S  S  S  Y  
                    Query_5542   181  ATTCAAAAGACACACTGTATCTGCACATGAACGACCTGAAAAGCGAGGACACAGCCGTGTATTTCTGCACCACTCATAGCAGTTCGTACT  270
V  91.7% (232/253)  IGHV3-15*01  227  ........A....G...........A......AG........C....................A...T.....-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  91.7% (11/12)    IGHD6-6*01   5    ---------------------------------------------------------------------------.......C....---  16
J  91.7% (44/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  Y  E  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_5542   271  ACTATGAGTACTGGGGTCAGGGAACCCGGGTCACCGTCTCCTCAG  315
J  91.7% (44/48)    IGHJ4*02     4    ...T...C........C..........T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_311120

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           296     2e-82
IGHD6-13*01                                                                                           18.0    0.58 
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-13*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGGCGG	GCAGCAGGTGGT	C	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGGCGGGCAGCAGGTGGTCACTGGTTCTTCGATGTC	AKDGRAAGGHWFFDV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	19	5	0	79.2
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	233	211	22	0	90.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  L 
                    Query_5543   13   TGTGCAGCCTCTGGATTCACCTTTAGCAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTTTG  102
V  90.6% (211/233)  IGHV3-30*18  64   .......................C..T..C.........................................................A.A  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  D  N  G  S  N  K  F  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  N  N  T  L  Y  L 
                    Query_5543   103  TCAGATAATGGAAGTAACAAATTCTATGCAGATTCCGTTAGGGGCCGATTCACCATCTCCAGAGACAATGCCAACAACACGCTGTATTTG  192
V  90.6% (211/233)  IGHV3-30*18  154  ...T..G..........T....A.........C.....G.A............................T....G............C..  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------CDR3-IMGT----------------->
                                       Q  L  N  S  L  R  D  A  D  T  A  I  Y  Y  C  A  K  D  G  R  A  A  G  G  H  W  F  F  D  V 
                    Query_5543   193  CAACTGAACAGCCTAAGAGATGCTGACACGGCTATCTATTACTGTGCGAAAGATGGGCGGGCAGCAGGTGGTCACTGGTTCTTCGATGTC  282
V  90.6% (211/233)  IGHV3-30*18  244  ...A..........G....C..AG.........G.G.................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  91.7% (11/12)    IGHD6-13*01  8    ------------------------------------------------------------.......C....------------------  19
J  96.1% (49/51)    IGHJ2*01     3    -------------------------------------------------------------------------......A.......C..  19

                                                                        
                                       W  G  R  G  T  L  V  T  V  S  S  
                    Query_5543   283  TGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  316
J  96.1% (49/51)    IGHJ2*01     20   ..................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_311127

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD3-3*01                                                                                            12.2    31   
IGHJ3*01                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCT	TTACGA	GGGGCTAACTTTTCCTT	TCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCTTTACGAGGGGCTAACTTTTCCTTTC	ARDLYEGLTFPF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5544   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTTCTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  91.0% (223/245)  IGHV4-59*01  49   ..........................................AG.....A........................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  N  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  N  S 
                    Query_5544   91   TGGCTAGGATATATCAATTACACTGGGAGTACCAACTACAATCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAACAGC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A.T..G......T......G......C...........C..................G.........................G.A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  E  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  Y  E  G  L  T  F  P 
                    Query_5544   181  CAATTCTCCCTGGAGTTGTCTTCTGTGACCGCTGCGGACACGGCCGTGTACTATTGTGCGAGAGACCTTTACGAGGGGCTAACTTTTCCT  270
V  91.0% (223/245)  IGHV4-59*01  229  ..G.........A..C..AGC.............................T..C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-3*01   4    --------------------------------------------------------------------......----------------  9

                                      -->                                  
                                       F  W  G  P  G  T  M  V  T  V  S  S  
                    Query_5544   271  TTCTGGGGCCCAGGGACAATGGTCACCGTCTCCTCAG  307
J  94.4% (34/36)    IGHJ3*01     15   -.........A.....................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_311126

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           288     5e-80
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ERPPGEQWLGNLL*LRDGR	245	304	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	109	52	45	6	1	86.5
CDR2-IMGT	110	130	21	15	6	0	71.4
FR3-IMGT	131	244	114	106	8	0	93
CDR3-IMGT (germline)	245	252	8	8	0	0	100
Total	N/A	N/A	252	222	23	7	88.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><---------------------FR2-IMGT---
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_5545   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.1% (222/252)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      ------------------><-----CDR2-IMGT-----><-------------------------------------------------
                                       L  E  W  I  G  G  N  H  S  L  W  K  H  Q  L  Q  S  V  P  P  E  S  S  H  H  L  S  R  H  V 
                    Query_5545   91   CTGGAATGGATTGGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTC  180
V  88.1% (222/252)  IGHV4-34*01  133  .....G..........-......A..A.AG.....G..C.........C.C.......A................A..............  221
                                       L  E  W  I  G   E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S

                                      ---FR3-IMGT----------------------------------------------------><-------------------------
                                       Q  E  P  V  L  P  E  I  E  L  C  E  R  R  G  H  G  C  V  L  L  C  E  R  P  P  G  E  Q  W 
                    Query_5545   181  CAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGG  270
V  88.1% (222/252)  IGHV4-34*01  222  .....................GC............C........................C...........------------------  293
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                  
D  91.7% (11/12)    IGHD6-19*01  7    ----------------------------------------------------------------------------------....G...  14

                                      CDR3-IMGT------------------------>                                 
                                       L  G  N  L  L  *  L  R  D  G  R  L  G  P  R  D  R  G  L  R  L  L  
                    Query_5545   271  CTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  337
D  91.7% (11/12)    IGHD6-19*01  15   ....---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_311125

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           285     4e-79
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGGG	AGCAATGGCTGG	GGAAGGTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTATGGACGCC	ARGHRGSNGWGRYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	22	2	6	73.3
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	218	26	6	87.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  P  F  S  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_5546   4    CCCTGAGACTCTCCTGCGCTGTGTACGGTGGGCCCTTCAGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  87.2% (218/250)  IGHV4-34*01  50   .....TCC...A..........C..T......T.........------....C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  L  D  T  S  
                    Query_5546   94   TGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAATCCGTCCCTCCAGAGTCGAGTCACCATATCACTAGACACGTCCA  183
V  87.2% (218/250)  IGHV4-34*01  134  ....G.............T..A....AG.....G............C.........A....................G............  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  G  S  N  G  
                    Query_5546   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGGGAGCAATGGCT  273
V  87.2% (218/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  R  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  I  S  S 
                    Query_5546   274  GGGGAAGGTACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCATCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.............T................A.....A..G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_311124

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           346     2e-97
IGHD2-15*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCTATTAC	GGTGGTAG	GCGAAATGA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCTATTACGGTGGTAGGCGAAATGATGACTAC	ATYYGGRRNDDY	237	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	23	20	20	0	0	100
CDR1-IMGT	24	47	24	24	0	0	100
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	21	3	0	87.5
FR3-IMGT	123	236	114	111	3	0	97.4
CDR3-IMGT (germline)	237	240	4	4	0	0	100
Total	N/A	N/A	237	229	8	0	96.6


Alignments

                                      <-----FR1-IMGT-----><-------CDR1-IMGT------><--------------------FR2-IMGT-----------------
                                         L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  L  
                    Query_5547   4    GACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGTTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGCTTT  93
V  96.6% (229/237)  IGHV3-11*06  56   .................................................C....................................G...  145
                                         L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  

                                      ----><-------CDR2-IMGT------><----------------------------------------------------FR3-IMGT
                                      S  Y  I  S  I  S  S  T  Y  T  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  K  N  S  
                    Query_5547   94   CATACATTAGTATAAGTAGTACTTACACAAACTACGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCAAGAACTCAG  183
V  96.6% (229/237)  IGHV3-11*06  146  ............GT.......G........................................A..........................C  235
                                      S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  

                                      ----------------------------------------------------><-------------CDR3-IMGT------------> 
                                      V  Y  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  T  Y  Y  G  G  R  R  N  D  D  Y  
                    Query_5547   184  TGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTGTATTACTGTGCGACCTATTACGGTGGTAGGCGAAATGATGACTACT  273
V  96.6% (229/237)  IGHV3-11*06  236  ...........................C.............................---------------------------------  292
                                      L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                   
D  100.0% (8/8)     IGHD2-15*01  14   -----------------------------------------------------------------........-----------------  21
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5547   274  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_298333

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD6-19*01                                                                                           12.2    30   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTGGC	GGCTGG	CTTAC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTGGCGGCTGGCTTACGGACGTC	TRGGGWLTDV	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5548   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTGGTTTCTACTGGAGCTGGATTCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   .............................T............A...A...............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  H  Y  S  G  H  T  N  Y  N  P  S  L  R  S  R  V  I  I  S  L  D  T  S  N  N 
                    Query_5548   91   TGGATTGGGAATATCCACTACAGTGGGCACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCATCATATCGCTGGACACGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  .........T.....T.T.........AG.......................A...........C......AG.A...........G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  I  S  L  K  V  N  S  G  T  A  A  D  T  A  L  Y  Y  C  T  R  G  G  G  W  L  T  D  V  W 
                    Query_5548   181  CAGATCTCCCTGAAGGTGAACTCTGGGACCGCTGCGGACACGGCCCTCTATTATTGTACGAGAGGTGGCGGCTGGCTTACGGACGTCTGG  270
V  90.6% (221/244)  IGHV4-59*01  229  ...T...........C...G.....T...................G.G.....C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  13   ---------------------------------------------------------------------......---------------  18
J  100.0% (40/40)   IGHJ6*02     23   --------------------------------------------------------------------------------..........  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_5548   271  GGCCAAGGGACCACGGTCACCGTCTCCTCA  300
J  100.0% (40/40)   IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_298330

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         338     5e-95
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	CTTC	CTATGATAGTAGCGGTAATT	CCCTCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGCTTCCTATGATAGTAGCGGTAATTCCCTCAACTACTTTGACTAC	ARASYDSSGNSLNYFDY	250	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	63	36	28	2	6	77.8
FR2-IMGT	64	114	51	48	3	0	94.1
CDR2-IMGT	115	135	21	20	1	0	95.2
FR3-IMGT	136	249	114	109	5	0	95.6
CDR3-IMGT (germline)	250	256	7	7	0	0	100
Total	N/A	N/A	256	238	12	6	93


Alignments

                                        <--------FR1-IMGT---------><-------------CDR1-IMGT------------><--------------------FR2-IM
                                         T  L  S  L  T  C  A  V  S  L  S  R  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G 
                    Query_5549     1    ACCCTGTCCCTCACCTGCGCTGTCTCTCTCTCTCGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCCGGG  90
V  93.0% (238/256)  IGHV4-30-4*01  49   ..................A........G------.....................A..............................A...  132
                                         T  L  S  L  T  C  T  V  S        G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G 

                                        GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                         K  G  L  E  W  I  G  D  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 
                    Query_5549     91   AAGGGCCTGGAGTGGATTGGAGACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTGGAC  180
V  93.0% (238/256)  IGHV4-30-4*01  133  ....................GT..................G.............................................A...  222
                                         K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                        --------FR3-IMGT----------------------------------------------------><--------------------
                                         K  S  K  N  Q  F  S  L  K  M  T  S  V  T  A  E  D  T  A  V  Y  Y  C  A  R  A  S  Y  D  S 
                    Query_5549     181  AAGTCCAAGAACCAGTTCTCCCTGAAGATGACCTCTGTGACTGCCGAAGACACGGCCGTGTATTACTGTGCCAGAGCTTCCTATGATAGT  270
V  93.0% (238/256)  IGHV4-30-4*01  223  .C.........................C...G..............C.............................--------------  298
                                         T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  90.0% (18/20)    IGHD3-22*01    7    --------------------------------------------------------------------------------..........  16

                                        CDR3-IMGT-------------------->                                  
                                         S  G  N  S  L  N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5549     271  AGCGGTAATTCCCTCAACTACTTTGACTACTGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  334
D  90.0% (18/20)    IGHD3-22*01    17   ..T...T...------------------------------------------------------  26
J  97.9% (47/48)    IGHJ4*02       1    ----------------............................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_298331

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ5*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGACC	ARGDYDIGWT	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  L  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_5550   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCCTTACTCACTACTGGAGCTGGATTCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .......................................AG..G.T................C.................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_5550   91   TGGATTGGATATATCTATTACAGTGGGACCACCACTTATAACCCTTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ........G...................G.....AC..C.....C..................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  T  W 
                    Query_5550   181  CGCTTCTCCCTGAAGGTGAGCTCCGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGACCTGG  270
V  91.4% (223/244)  IGHV4-59*01  229  .AG............C.......T.......................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  97.2% (35/36)    IGHJ5*02     16   -------------------------------------------------------------------------------------.....  20

                                                                     
                                       G  Q  G  S  L  V  T  V  S  S  
                    Query_5550   271  GGCCAGGGATCCCTGGTCACCGTCTCCTCAG  301
J  97.2% (35/36)    IGHJ5*02     21   .........A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_298336

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           341     5e-96
IGHD6-19*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	C	TATAGCAGTGGCTGGT	C	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGACTATAGCAGTGGCTGGTCCTTTGACTCC	ARDYSSGWSFDS	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5551   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTACTTTCAGTAGCTACTGGATACACTGGGTCCGCCAAGCTCCAGGAAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-74*01  47   ..................................C..C.................G.......................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  I  T  R  D  E  I  G  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5551   91   AGTGGGTCTCACGTATTACTAGAGATGAGATTGGCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.6% (234/250)  IGHV3-74*01  137  T.................A...T....G..G.A......G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  S  S  G  W  S  
                    Query_5551   181  AGAATACGGTGTATCTGCAAATGAACAGTCTCAGAGCCGAGGACACGGCTGTATATTACTGTGCAAGGGACTATAGCAGTGGCTGGTCCT  270
V  93.6% (234/250)  IGHV3-74*01  227  ....C...C......................G....................G..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (16/16)   IGHD6-19*01  4    -----------------------------------------------------------------------................---  19
J  92.9% (39/42)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                
                                      F  D  S  W  G  R  G  P  L  V  T  V  S  S
                    Query_5551   271  TTGACTCCTGGGGCCGGGGACCCCTGGTCACCGTCTCCTC  310
J  92.9% (39/42)    IGHJ4*02     7    ......A........A....A...................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_298337

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTTTATTACCT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTATTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	282	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	68	62	62	0	0	100
CDR1-IMGT	69	92	24	19	5	0	79.2
FR2-IMGT	93	143	51	50	1	0	98
CDR2-IMGT	144	167	24	22	2	0	91.7
FR3-IMGT	168	281	114	108	6	0	94.7
CDR3-IMGT (germline)	282	289	8	8	0	0	100
Total	N/A	N/A	283	269	14	0	95.1


Alignments

                                      <--------------------------FR1-IMGT--------------------------><-------CDR1-IMGT------><---
                                         Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y  W  I  
                    Query_5552   7    TGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTTCCACTTATTGGATCG  96
V  95.1% (269/283)  IGHV5-51*01  14   ......................................................................C...A...GC..C.......  103
                                         Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W  I  

                                      -----------------FR2-IMGT---------------------><-------CDR2-IMGT------><------------------
                                      A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  P  S  F  
                    Query_5552   97   CCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAGTCCGTCCTTCG  186
V  95.1% (269/283)  IGHV5-51*01  104  G.................................................T.................A..........C.........C  193
                                      G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S  F  

                                      ----------------------------------FR3-IMGT------------------------------------------------
                                      E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A  I  Y  
                    Query_5552   187  AAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGCCATCTATT  276
V  95.1% (269/283)  IGHV5-51*01  194  .....................C...............C...........................A...................G....  283
                                      Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M  Y  

                                      ----><-----------------------CDR3-IMGT----------------------->                            
                                      Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_5552   277  ACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTATTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCT  366
V  95.1% (269/283)  IGHV5-51*01  284  .............-----------------------------------------------------------------------------  296
                                      Y  C  A  R                                                                                
D  85.7% (12/14)    IGHD1-26*01  4    ---------------------...G....A.....-------------------------------------------------------  17
J  98.0% (48/49)    IGHJ6*02     14   ----------------------------------------------............................................  57

                                           
                                      S  S 
                    Query_5552   367  CGTCA  371
J  98.0% (48/49)    IGHJ6*02     58   .C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_209374

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            10.3    116  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GCGGGCTTTAG	TTTTG	T	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGAGCGGGCTTTAGTTTTGTCC	TTERALVLS	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	104	10	0	91.2
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	239	17	0	93.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5553   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCACCAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.4% (239/256)  IGHV3-15*01  47   .......T..................................GT..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  I  G  R  I  K  T  K  T  D  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  I  L  S  R  D  
                    Query_5553   91   AGTGGATTGGCCGTATTAAAACCAAGACTGATGGTGAGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCATCCTCTCAAGAGATG  180
V  93.4% (239/256)  IGHV3-15*01  137  .....G...............G...A..........G......................................C.A............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  K  Y  T  V  Y  L  Q  M  N  S  L  K  M  D  D  T  A  V  Y  Y  C  T  T  E  R  A  L  V  
                    Query_5553   181  ATTCAAAATATACAGTGTATCTGCAAATGAACAGCCTGAAAATGGACGACACAGCCGTGTATTATTGTACCACAGAGCGGGCTTTAGTTT  270
V  93.4% (239/256)  IGHV3-15*01  227  ........A.C..GC...........................CC..G.................C...........--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (5/5)     IGHD3-3*01   11   ---------------------------------------------------------------------------------------...  13

                                      ---->                                  
                                      L  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5553   271  TGTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
D  100.0% (5/5)     IGHD3-3*01   14   ..-------------------------------------  15
J  100.0% (36/36)   IGHJ5*02     16   ---....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_270411

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           377     8e-107
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	242	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5554   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.6% (242/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5554   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  99.6% (242/243)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_5554   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCTAGACGTGGATACAGCTATGGTTACTACTAC  270
V  99.6% (242/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5554   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_209376

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           352     3e-99
IGHD3-3*01                                                                                            10.3    119  
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GCTTG	ACGAT	CGCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGCTTGACGATCGCATACTACTTTGACTAC	ATGLTIAYYFDY	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_5555   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  95.2% (237/249)  IGHV4-31*02  50   .....TCC...A..................G...........................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  D  T  S  
                    Query_5555   94   TAGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTTACCATATCACTAGACACGTCTA  183
V  95.2% (237/249)  IGHV4-31*02  140  .G.......................................................A...................G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  D  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  L  T  I  A  Y  Y  
                    Query_5555   184  AGGACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGCTTGACGATCGCATACTACT  273
V  95.2% (237/249)  IGHV4-31*02  230  ..A...............A.................................G.............G..---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-3*01   6    --------------------------------------------------------------------------.....-----------  10
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5555   274  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_209377

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           315     5e-88
IGHD4-17*01                                                                                           14.1    8.4  
IGHJ5*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGAATAC	AG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGAATACAGCAACTGGGTCGCCCCC	ARDSGEYSNWVAP	250	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	135	27	19	2	6	70.4
FR3-IMGT	136	249	114	104	10	0	91.2
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	231	20	6	89.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  T  D  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_5556   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGAACTGATGGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGG  90
V  89.9% (231/257)  IGHV4-61*08  49   ....................................G....C.G..G..........................................A  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  H  I  Y  N  Y  N  R  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D 
                    Query_5556   91   CTGGAGTGGATCGGTCATATCTATAACTATAACAGAGGGAGCACCAATTATAATCCCTCCCTCCAAAGTCGAGTCACCATATCAGTAGAC  180
V  89.9% (231/257)  IGHV4-61*08  139  ...........T..GT........T..------..T...........C..C..C.........A.G........................  222
                                       L  E  W  I  G  Y  I  Y  Y        S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------CDR3-I
                                       T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  G  E  Y 
                    Query_5556   181  ACATCCAAGAACCAGTTCTCCCTGAAGTTGACCTCGGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATTCCGGTGAATAC  270
V  89.9% (231/257)  IGHV4-61*08  223  ..G........................C...G...T.......................G.................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  90.0% (9/10)     IGHD4-17*01  7    --------------------------------------------------------------------------------......C...  16

                                      MGT-------------->                                  
                                       S  N  W  V  A  P  W  G  P  G  T  L  V  P  V  P  S  
                    Query_5556   271  AGCAACTGGGTCGCCCCCTGGGGCCCGGGAACCCTGGTCCCCGTCCCCTCAG  322
J  90.0% (45/50)    IGHJ5*02     2    --.......T...A...........A.............A.....T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_209371

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5557   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_5557   91   CTCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..G...............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G 
                    Query_5557   181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .........................G................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5557   271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_209372

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           300     8e-84
IGHD3-3*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTCAA	GGAGTTCC	AGTAGTTATTAT	GTCGGGTTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGGAGTTCCAGTAGTTATTATGTCGGGTTGGACTACTTTGAAAAC	SRSSSSYYVGLDYFEN	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	24	18	3	3	75
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	243	4	3	1	0	75
Total	N/A	N/A	246	221	22	3	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  S  F  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5558   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCGATGACTATAGTTTCCACTGGGTCCGTCAAGCTCCGGGGAAGGGTCTGG  90
V  89.8% (221/246)  IGHV3-43*01  47   .....................................C..T.....T....CCA.G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  G  W  D  G     T  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5558   91   AGTGGGTCTCTTTCATTGGTTGGGATGGG---ACCACAGACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCG  177
V  89.8% (221/246)  IGHV3-43*01  137  ...........C.T...A..........TGGT.G....T..................................................A  226
                                      E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      D  N  S  L  F  L  Q  M  T  G  L  R  I  E  D  T  A  L  Y  Y  C  S  R  S  S  S  S  Y  Y  V  
                    Query_5558   178  ACAACTCCCTCTTTCTGCAAATGACTGGTCTGAGAATTGAGGACACCGCCTTGTATTACTGTTCAAGGAGTTCCAGTAGTTATTATGTCG  267
V  89.8% (221/246)  IGHV3-43*01  227  .A........G.A...........ACA.........C.........................G...------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A                          
D  91.7% (11/12)    IGHD3-3*01   17   --------------------------------------------------------------------------...G........----  28

                                      T------------------>                                  
                                      G  L  D  Y  F  E  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5558   268  GGTTGGACTACTTTGAAAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  95.8% (46/48)    IGHJ4*02     1    ------..........CT....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_209373

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           302     3e-84
IGHD3-16*01                                                                                           12.2    32   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGG	TGGGGG	GGCCCCGGTAT	TACGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGGTGGGGGGGCCCCGGTATTACGCTATGGACGTC	AREGVGGPRYYAMDV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	219	26	0	89.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  M  S  D  F  Y  W  S  W  L  R  Q  P  P  G  K  A  L  E 
                    Query_5559   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGCTTCCATGAGTGACTTCTACTGGAGTTGGCTCCGGCAGCCCCCAGGGAAGGCACTGGAG  90
V  89.4% (219/245)  IGHV4-59*01  49   ..................A............GC.....C...AGT.A.........C...A.....................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  T  N  H  N  P  S  L  R  N  R  V  T  I  S  V  D  R  S  K  N 
                    Query_5559   91   TGGATTGGGTACATCTATTACACTGGGAGTACCAACCACAATCCCTCCCTCAGGAATCGAGTCACCATTTCAGTAGACAGGTCCAAGAAC  180
V  89.4% (219/245)  IGHV4-59*01  139  ...........T..........G......C......T....C..........A..G............A..........C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  E  G  V  G  G  P  R  Y  Y 
                    Query_5559   181  CAGTTCTCCCTGAAGTTGACTTCTGTGACCGCTGCGGACACGGCCATATATTATTGTGCGAGAGAGGGGGTGGGGGGGCCCCGGTATTAC  270
V  89.4% (219/245)  IGHV4-59*01  229  ...............C...GC........................G.G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------......--------------  22
J  97.9% (47/48)    IGHJ6*02     15   ---------------------------------------------------------------------------------------...  17

                                      ----------->                                 
                                       A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5559   271  GCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  315
J  97.9% (47/48)    IGHJ6*02     18   .G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_305461

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD4-4*01                                                                                            16.1    2.2   
IGHJ3*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-4*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGGAAGACA	GACTACAG	C	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGGAAGACAGACTACAGCGATGCTTTTGATATG	AWKTDYSDAFDM	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	238	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5560   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.7% (238/246)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  Y  T  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  M  S 
                    Query_5560   91   CTGGAGTGGATTGGCTACATCTCTTACACTGGGAGAACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACATGTCT  180
V  96.7% (238/246)  IGHV4-31*03  139  ..............G.......A.....G......C.................................................C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  W  K  T  D  Y  S  D  A 
                    Query_5560   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACGGCCGCGGACACGGCCGTCTATTACTGTGCGTGGAAGACAGACTACAGCGATGCT  270
V  96.7% (238/246)  IGHV4-31*03  229  ...................A...............T.................G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (8/8)     IGHD4-4*01   2    ---------------------------------------------------------------------------........-------  9
J  98.0% (48/49)    IGHJ3*02     2    ------------------------------------------------------------------------------------......  7

                                      -------->                                  
                                       F  D  M  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5560   271  TTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  313
J  98.0% (48/49)    IGHJ3*02     8    ........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_201145

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           420     7e-120
IGHD1-26*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTGTTTTC	TGGGACCTACTAC	CTTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTAC	ARVFSGTYYLLDY	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	111	3	0	97.4
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	281	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  T  A  F  G  Y  S  F  T  
                    Query_5561   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTACGGCTTTTGGATACAGCTTTACCA  93
V  95.9% (281/293)  IGHV5-51*03  2    ..................................................................A..G..C.................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  R  D  G  E  T  R  Y  
                    Query_5561   94   GTTATTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTCGTGACGGTGAAACCAGATACA  183
V  95.9% (281/293)  IGHV5-51*03  92   .C..C...............................................................G.....TC...T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  
                    Query_5561   184  GCCCGTCCTTCCAAGGCCAGGTCAGCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACA  273
V  95.9% (281/293)  IGHV5-51*03  182  ........................C....................................................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                
                                      T  A  M  Y  Y  C  A  R  V  F  S  G  T  Y  Y  L  L  D  Y  W  G  R  G  T  L  V  T  V  S  S
                    Query_5561   274  CCGCCATGTATTATTGTGCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTC  361
V  95.9% (281/293)  IGHV5-51*03  272  .............C.........-----------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                  
D  92.3% (12/13)    IGHD1-26*01  8    -------------------------------.....G.......--------------------------------------------  20
J  97.5% (39/40)    IGHJ4*02     7    ------------------------------------------------...............A........................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_201144

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           372     2e-105
IGHD1-7*01                                                                                            16.1    2.5   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ACTGGAAATAC	ATAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTC	ARDRTGNTYYGLDV	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	16	8	0	66.7
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	101	13	0	88.6
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	267	29	0	90.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S 
                    Query_5562   1    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTATACTTTCAGT  90
V  90.2% (267/296)  IGHV1-18*01  1    .....................................A.................................T........C..C..T.CC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  D  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  S  F  N  G  N  T  I  Y 
                    Query_5562   91   AATGATGGTATTAGCTGGGTGCGACAGGCCCCCGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCTCTTTCAATGGAAACACAATCTAC  180
V  90.2% (267/296)  IGHV1-18*01  91   .GCT.......C....................T.......................A.........G...A......T.......A...T  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  L  Q  G  R  V  T  M  T  T  E  T  S  T  T  T  A  Y  M  E  L  R  S  L  T  Y  D  D 
                    Query_5562   181  GCACAGAATTTACAGGGCAGAGTTACCATGACCACAGAAACTTCTACGACCACAGCCTACATGGAGCTGAGGAGCCTGACATATGACGAC  270
V  90.2% (267/296)  IGHV1-18*01  181  ........GC.C...........C..............C..A..C....G.............................G..C.......  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  F  C  A  R  D  R  T  G  N  T  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_5562   271  ACGGCCGTGTATTTCTGTGCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  360
V  90.2% (267/296)  IGHV1-18*01  271  .............A............----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  90.9% (10/11)    IGHD1-7*01   7    ------------------------------.......C...-------------------------------------------------  17
J  95.8% (46/48)    IGHJ6*02     15   ---------------------------------------------......A....C.................................  59

                                         
                                       S 
                    Query_5562   361  TCA  363
J  95.8% (46/48)    IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_201142

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           374     8e-106
IGHD3-10*01                                                                                           14.1    9.5   
IGHJ5*01                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	CCACCCAA	ATTACTTGGGTTC	CCAGCCATTTGC	CTCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGCCACCCAAATTACTTGGGTTCCCAGCCATTTGCCTCC	ASHPNYLGSQPFAS	290	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	69	2	0	97.2
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	18	6	0	75
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	294	5	4	1	0	80
Total	N/A	N/A	289	264	25	0	91.3


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  G  S  L  K  I  S  C  K  G  S  G  H  S  F  I  G  
                    Query_5563   6    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGGGTCTCTGAAGATCTCCTGTAAGGGTTCCGGACACAGTTTTATCGGCC  95
V  91.3% (264/289)  IGHV5-51*03  5    ..........................................A...........................T...T....C....C.A..T  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      H  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  M  I  Y  F  D  D  S  D  T  R  Y  S  
                    Query_5563   96   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGAAAAGGCCTGGAGTGGATGGGGATGATATATTTTGACGACTCTGATACAAGATACAGTC  185
V  91.3% (264/289)  IGHV5-51*03  95   ...............................G.......................C..C...CC..GT...........C........C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  V  Y  L  Q  W  S  S  L  R  A  S  D  T  
                    Query_5563   186  CGTCCTTCGAGGGCCAGGTCACCATCTCCGCCGACAAGTCCATCAGTACCGTCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACACTG  275
V  91.3% (264/289)  IGHV5-51*03  185  ........C.A.................A.................C....C.......................A............C.  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                  
                                      A  M  Y  F  C  A  S  H  P  N  Y  L  G  S  Q  P  F  A  S  W  G  H  G  T  L  V  T  V  S  S  
                    Query_5563   276  CCATGTATTTCTGTGCCAGCCACCCAAATTACTTGGGTTCCCAGCCATTTGCCTCCTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  365
V  91.3% (264/289)  IGHV5-51*03  275  .........A......G..-----------------------------------------------------------------------  293
                                      A  M  Y  Y  C  A                                                                          
D  84.6% (11/13)    IGHD3-10*01  3    ---------------------------......AT.....--------------------------------------------------  15
J  97.4% (37/38)    IGHJ5*01     14   ----------------------------------------------------............A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_201141

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           316     2e-88
IGHD1-7*01                                                                                            16.1    2.2  
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAGGGGCG	GGAACTAC	CGCTA	TGATA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAGAGGGGCGGGAACTACCGCTATGATACTTTTGATATC	VRERGGNYRYDTFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  T  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5564   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTGCCTATACAATTCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.4% (226/250)  IGHV3-64*01  47   .....................................C......AG....G.T..G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  S  I  S  S  N  G  G  S  A  S  Y  G  H  S  V  K  D  R  F  T  I  S  R  D  N  L  
                    Query_5564   91   AATTTGTTTCAAGCATTAGTAGTAATGGGGGTAGTGCATCTTATGGACACTCTGTGAAGGACAGATTCACCATCTCCAGAGACAATTTAA  180
V  90.4% (226/250)  IGHV3-64*01  137  ...A.......GCT....................CA...A.....C.A............G..........................CC.  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  I  F  L  Q  M  G  S  L  R  T  E  D  M  A  V  Y  Y  C  V  R  E  R  G  G  N  Y  R  
                    Query_5564   181  AGAACACGATATTTCTTCAAATGGGCAGCCTGAGAACTGAAGACATGGCTGTGTATTACTGTGTGAGAGAGAGGGGCGGGAACTACCGCT  270
V  90.4% (226/250)  IGHV3-64*01  227  ........C.G.A......................G....G......................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-7*01   10   ------------------------------------------------------------------------------........----  17

                                      ---------------->                                  
                                      Y  D  T  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5564   271  ATGATACTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  98.0% (49/50)    IGHJ3*02     1    -....G.............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_217004

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            299     2e-83
IGHD3-3*02                                                                                            10.3    117  
IGHJ6*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACTTTCGCTTCGCCCTACCG	GCATT	N/A	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACTTTCGCTTCGCCCTACCGGCATTTGGACGTC	ARTFASPYRHLDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	27	21	3	3	77.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	245	220	22	3	89.8


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  V  S  G  G  S  I  T     N  H  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_5565  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAC---TAATCACTGGTGGACCTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  87
V  89.8% (220/245)  IGHV4-4*01  49   ..................G.....................GCAG..G.A.........GT..............................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  F  P  N  G  N  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  M  D  K  S  K 
                    Query_5565  88   GAGTGGATTGGGGAAATTTTTCCTAATGGAAACACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATATCAATGGATAAGTCCAAG  177
V  89.8% (220/245)  IGHV4-4*01  139  .................C.A..A..G...G.G...............................G...........G.A..C.........  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                      N  Q  V  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  T  F  A  S  P  Y  R  H 
                    Query_5565  178  AACCAGGTCTCCCTGAAACTTAACTCTGTGACGGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGACTTTCGCTTCGCCCTACCGGCAT  267
V  89.8% (220/245)  IGHV4-4*01  229  ......T..........G..G.G.........C......................G.........-------------------------  293
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  100.0% (5/5)     IGHD3-3*02  7    --------------------------------------------------------------------------------------....  10

                                     -------->                              
                                      L  D  V  W  G  Q  G  A  T  V  S  V  S 
                    Query_5565  268  TTGGACGTCTGGGGCCAAGGGGCCACGGTCAGCGTCTCC  306
D  100.0% (5/5)     IGHD3-3*02  11   .--------------------------------------  11
J  94.7% (36/38)    IGHJ6*02    22   -....................A.........C.......  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_201148

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     5e-96
IGHD6-19*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAGATATCTCC	TAGCAGTGGCTGGT	CAACACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGATATCTCCTAGCAGTGGCTGGTCAACACCTCTATTTGACTAC	ARQISPSSGWSTPLFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  T  Y  T  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_5566   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTACCTATACCATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (233/248)  IGHV3-21*01  47   ....................G........................G.....G....A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  S  F  I  N  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5566   91   AGTGGGTCTCATCCATCAGTAGTAGAGGTAGTTTCATAAATTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (233/248)  IGHV3-21*01  137  ................T........TA......A....T.C............G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  I  S  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  S  S  G  
                    Query_5566   181  AGAACTCACTGTATCTGCAAATAAGCAGCCTGAGAGGCGAGGACACGGCTGTTTATTACTGTGCGAGACAGATATCTCCTAGCAGTGGCT  270
V  94.0% (233/248)  IGHV3-21*01  227  ......................G.A...........C...............G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD6-19*01  6    -------------------------------------------------------------------------------...........  16

                                      GT-------------------->                                  
                                      W  S  T  P  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5566   271  GGTCAACACCTCTATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (14/14)   IGHD6-19*01  17   ...------------------------------------------------------  19
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_269422

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           369     2e-104
IGHD1-20*01                                                                                           14.1    9.3   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGAATACAA	GTATAAC	GGAATAGGG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGAATACAAGTATAACGGAATAGGGATGGACGTC	TRSEYKYNGIGMDV	281	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	166	21	19	2	0	90.5
FR3-IMGT	167	280	114	102	12	0	89.5
CDR3-IMGT (germline)	281	286	6	5	1	0	83.3
Total	N/A	N/A	286	261	25	0	91.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  E  S  R  N
                    Query_5567   1    GCAGCTGGTGCAGTCTGGAGGAGGCCTGATCCAGCCGGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCGGGGTTCACCGAAAGTAGGAA  90
V  91.3% (261/286)  IGHV3-53*01  6    ..........G..............T..........T................................T..........TC.....C..  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  T  T  H  Y  A  D  S
                    Query_5567   91   TTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGGAGTGGGTCTCAGTTATTTATAGTGGTGGTACCACACACTACGCAGATTC  180
V  91.3% (261/286)  IGHV3-53*01  96   C.......G...........................G..........................C.......G....T..........C..  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  N  S  M  T  T  L  F  L  Q  M  N  S  L  R  A  E  D  S  A  V
                    Query_5567   181  TGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCATGACCACATTGTTTCTTCAAATGAACAGTTTGAGAGCCGAGGACTCGGCCGT  270
V  91.3% (261/286)  IGHV3-53*01  186  C...........A.........................A..A...GC...A...............CC..............A.......  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><----------------CDR3-IMGT--------------->                                 
                                        Y  Y  C  T  R  S  E  Y  K  Y  N  G  I  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5567   271  GTATTACTGTACGAGATCAGAATACAAGTATAACGGAATAGGGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  355
V  91.3% (261/286)  IGHV3-53*01  276  ..........G.....---------------------------------------------------------------------  291
                                        Y  Y  C  A  R                                                                      
D  100.0% (7/7)     IGHD1-20*01  2    ---------------------------.......---------------------------------------------------  8
J  100.0% (42/42)   IGHJ6*02     21   -------------------------------------------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_269423

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         349     2e-98
IGHD3-16*02                                                                                           25.7    0.003
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGCAGCC	TGGGGGAATTATCGTT	C	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGCAGCCTGGGGGAATTATCGTTCCTTTGACTAC	ARAAWGNYRSFDY	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	112	2	0	98.2
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  T  V  S  D  G  S  I  S  G  G  G  F  Y  W  S  W  L  R  Q  P  P  G  K  G  
                    Query_5568     4    CCCTGAGACTCTCCTGTACTGTCTCTGATGGCTCCATCAGCGGTGGTGGTTTCTACTGGAGTTGGCTCCGCCAGCCCCCAGGGAAGGGCC  93
V  95.1% (235/247)  IGHV4-30-4*01  50   .....TCC...A....C..........G.............A......A..A.............A........................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_5568     94   TGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCA  183
V  95.1% (235/247)  IGHV4-30-4*01  140  ..........................................................................................  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                        K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  A  A  W  G  N  Y  R  
                    Query_5568     184  AGAACCACTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTTCTGTGCCAGGGCAGCCTGGGGGAATTATCGTT  273
V  95.1% (235/247)  IGHV4-30-4*01  230  .......G.................................................A.........-----------------------  296
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  93.8% (15/16)    IGHD3-16*02    17   --------------------------------------------------------------------------.......G........  32

                                        ---------->                                  
                                        S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5568     274  CCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (44/44)   IGHJ4*02       5    -............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_269425

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           260     1e-71
IGHD2-15*01                                                                                           12.2    32   
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TGGTGG	CGGACGGGGGCTCGATTGGGGTGCGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTGGCGGACGGGGGCTCGATTGGGGTGCGGTGGTTCGACACC	ARLVADGGSIGVRWFDT	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	95	19	0	83.3
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	205	39	0	84


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  I  R  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  T  L  E 
                    Query_5569   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGCCTCCATTAGAAGTTATTACTGGAGTTGGGTTCGCCAGCCCCCCGGCAAGACACTGGAG  90
V  84.0% (205/244)  IGHV4-59*08  49   ...................C...........G......C..T.....C........C...A.C..G........A..G...GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  F  H  T  G  T  T  N  H  H  P  S  L  K  S  R  V  T  I  S  S  D  T  S  K  N 
                    Query_5569   91   TGGATTGGCTATTTCTTTCACACCGGGACCACCAATCACCATCCCTCCCTCAAGAGTCGAGTCACCATTTCATCAGACACGTCCAAGAAC  180
V  84.0% (205/244)  IGHV4-59*08  139  ........G...A...A.T...GT....G......CT..A.C..........................A...GT................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       I  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  V  A  D  G  G  S  I  G 
                    Query_5569   181  ATCTTCTCATTGACTCTGACGTCTGTGACCGCCGCAGACACGGCCGTCTATTTTTGTGCGAGACTGGTGGCGGACGGGGGCTCGATTGGG  270
V  84.0% (205/244)  IGHV4-59*08  229  CAG.....CC...AG....GC..........................G....AC..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-15*01  13   ----------------------------------------------------------------......--------------------  18

                                      ----------------->                                  
                                       V  R  W  F  D  T  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_5569   271  GTGCGGTGGTTCGACACCTGGGGCCAGGGAACGCTGGTCAGCGTCTCATCAG  322
J  91.3% (42/46)    IGHJ5*02     6    ------.........C................C.......C......C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_301697

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           363     1e-102
IGHD3-10*01                                                                                           14.1    8.1   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTA	GGG	CGGGGAG	AGGGGG	CTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGGGCGGGGAGAGGGGGCTTGGACTAC	RAGRGGLDY	248	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	28	27	1	0	96.4
CDR1-IMGT	29	52	24	24	0	0	100
FR2-IMGT	53	103	51	50	1	0	98
CDR2-IMGT	104	133	30	27	3	0	90
FR3-IMGT	134	247	114	111	3	0	97.4
CDR3-IMGT (germline)	248	248	1	1	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  E
                    Query_5570   1    GTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGA  90
V  96.8% (240/248)  IGHV3-73*01  48   ........A.................................................................................  137
                                        S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  E

                                      ------------><----------CDR2-IMGT---------><----------------------------------------------
                                        W  V  G  H  I  R  S  I  S  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  D
                    Query_5570   91   GTGGGTTGGCCATATTAGAAGCATCTCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATGA  180
V  96.8% (240/248)  IGHV3-73*01  138  ...........G...........AAG................................................................  227
                                        W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  D

                                      ------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-----
                                        S  E  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  R  A  G  R  G  G  L  D
                    Query_5570   181  TTCAGAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTCTATTATTGTAGGGCGGGGAGAGGGGGCTTGGA  270
V  96.8% (240/248)  IGHV3-73*01  228  ....A....................................................G.....C....----------------------  295
                                        S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                        
D  100.0% (7/7)     IGHD3-10*01  15   -----------------------------------------------------------------------.......------------  21
J  97.7% (43/44)    IGHJ4*02     5    ------------------------------------------------------------------------------------...T..  10

                                      --->                                  
                                        Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5570   271  CTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  308
J  97.7% (43/44)    IGHJ4*02     11   ......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_269428

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           315     5e-88
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGCCTG	ATGGTTCGGGGAGCTATT	TGGAGGGGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGCCTGATGGTTCGGGGAGCTATTTGGAGGGGTTACTTTGACTAC	ARLMVRGAIWRGYFDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	248	3	3	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  G  S  F  S  S  S  N  F  Y  W  G  W  I  R  Q  A  P  G  K  G  
                    Query_5571   4    CCCTGAGACTCTCCTGCAGTGTCTCTGGTGGCTCCTTCAGCAGTAGTAACTTCTACTGGGGCTGGATCCGCCAGGCCCCAGGGAAGGGAC  93
V  91.0% (223/245)  IGHV4-39*01  50   .....TCC...A......C................A............GT.A......................C.............G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  W  Y  S  G  R  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_5571   94   TAGAGTGGATTGGGAATATCTGGTATAGTGGGAGGACTAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCA  183
V  91.0% (223/245)  IGHV4-39*01  140  .G.............G.....AT...........C..CT........C..........................................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  K  L  S  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  V  R  G  A  I  
                    Query_5571   184  AGAACCAGTTCTCCCTGAAGTTGAGCTCTGCGACCGCCGCAGACACGGCTGTATATTACTGTGCGCGCCTGATGGTTCGGGGAGCTATTT  273
V  91.0% (223/245)  IGHV4-39*01  230  ....................C.........T.....................G............-------------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  94.4% (17/18)    IGHD3-10*01  9    -----------------------------------------------------------------------.............T....-  26

                                      T------------------>                                  
                                      W  R  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5571   274  GGAGGGGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (46/46)   IGHJ4*02     3    --------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_339163

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         297     7e-83
IGHD1-26*01                                                                                           10.3    121  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GGAGTCATAATTATCA	TGGGA	ATTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGAGTCATAATTATCATGGGAATTTCTACTTCGACCAC	ARGSHNYHGNFYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	220	30	0	88


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  D  S  V  Y  Y  S  L  N  W  I  R  Q  T  P  L  K  G 
                    Query_5572     1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCATCGACAGTGTTTACTACTCCTTAAACTGGATCCGGCAGACACCACTGAAGGGC  90
V  88.0% (220/250)  IGHV4-30-2*01  49   .......................C...............AG.....G.GGT.......GG.G.............C.....GG.......  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Q  H  S  G  A  T  Y  Y  N  P  S  L  E  S  R  V  S  L  S  V  D  R  S 
                    Query_5572     91   CTGGAGTGGATTGGCTACATCCAGCATTCTGGGGCCACCTACTACAACCCGTCCCTCGAGAGTCGGGTCTCCCTTTCAGTAGACCGGTCC  180
V  88.0% (220/250)  IGHV4-30-2*01  139  ..............G......T.T...AG....AG......................A.......A...A..A.A.........A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  S  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  H  N  Y  H  G 
                    Query_5572     181  AAGAGCCAGTTCTCCCTGAGGCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGAGGGAGTCATAATTATCATGGG  270
V  88.0% (220/250)  IGHV4-30-2*01  229  ....A..............A.....G...........................G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD1-26*01    8    --------------------------------------------------------------------------------------....  11

                                        ----------------->                                  
                                         N  F  Y  F  D  H  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_5572     271  AATTTCTACTTCGACCACTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTCAG  322
D  100.0% (5/5)     IGHD1-26*01    12   .---------------------------------------------------  12
J  91.5% (43/47)    IGHJ4*02       2    -----......T...T...............C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_52970

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           291     5e-81
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	213	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_5573   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  88.8% (213/240)  IGHV4-59*01  49   ..................A......................T.GT.A...C....G.............C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R 
                    Query_5573   91   TGGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGA  180
V  88.8% (213/240)  IGHV4-59*01  139  .......GG.....C.ATT................C..C...........C.....................G.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G 
                    Query_5573   181  CACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGT  270
V  88.8% (213/240)  IGHV4-59*01  229  ..G...........G....G............T..............G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-22*01  7    -----------------------------------------------------------------------------..........A..  19

                                      ----------------------->                                  
                                       G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5573   271  GGCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  328
D  93.3% (14/15)    IGHD3-22*01  20   ..--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    --------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_52973

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            321     7e-90
IGHD2-15*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACA	GTGGTAG	GAGGAATCAGGCCCTCGCAAC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACAGTGGTAGGAGGAATCAGGCCCTCGCAACTTGACTAC	ARTVVGGIRPSQLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  S  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5574   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTCTTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.5% (226/247)  IGHV3-7*03   47   .............................................G..A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  E  A  G  N  E  R  N  F  V  D  S  M  K  G  R  L  T  I  S  R  D  N  A  
                    Query_5574   91   AGTGGGTGGCCAACATAAACGAGGCTGGAAATGAGAGAAACTTTGTTGACTCTATGAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  91.5% (226/247)  IGHV3-7*03   137  ...................GC.A.A.....G.....A.T...A...G......G...........T........................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  K  S  L  Y  L  Q  M  H  S  L  R  G  E  D  T  G  V  Y  Y  C  A  R  T  V  V  G  G  I  R  
                    Query_5574   181  AGAAGTCACTGTATCTGCAAATGCACAGCCTGAGAGGCGAAGACACAGGCGTTTATTACTGTGCGAGGACAGTGGTAGGAGGAATCAGGC  270
V  91.5% (226/247)  IGHV3-7*03   227  ....C..................A............C...G.....G.C...G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-15*01  15   -----------------------------------------------------------------------.......------------  21

                                      ---------------->                                  
                                      P  S  Q  L  D  Y  W  G  Q  G  T  L  V  T  V  S  T  
                    Query_5574   271  CCTCGCAACTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCACAG  321
J  97.6% (41/42)    IGHJ4*02     7    ---------......................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_52972

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*03                                                                                           344     6e-97
IGHD2-8*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*03	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCCTGG	ATTGCACTGATGGTGTCTGTTAT	GCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATCGCCTGGATTGCACTGATGGTGTCTGTTATGCTTTTGACCAA	VKDRLDCTDGVCYAFDQ	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  N  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5575   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACATTCAGTAACTATGCTATGCACTGGGTCCGCCAGGCTCCTGGGAAGGGACTGG  90
V  94.0% (235/250)  IGHV3-64*03  47   .....................................C.......G..............................A.............  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  P  N  G  G  S  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5575   91   AATATGTTTCAGCGATTAGTCCTAATGGAGGTAGTACATACTTCGCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-64*03  137  .............T......AG......G.....C.......A...............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  D  R  L  D  C  T  D  
                    Query_5575   181  GGAACACTCTATATCTCCAAATGAGCAGTCTGAGAGCTGAGGACACGGCTCTCTATTACTGTGTGAAAGATCGCCTGGATTGCACTGATG  270
V  94.0% (235/250)  IGHV3-64*03  227  A......G..G...G...................................G.G.................--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  82.6% (19/23)    IGHD2-8*01   6    ------------------------------------------------------------------------------....T...A...  17

                                      GT-------------------->                                  
                                      G  V  C  Y  A  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5575   271  GTGTCTGTTATGCTTTTGACCAATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  82.6% (19/23)    IGHD2-8*01   18   ....A..C...----------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    --------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_52975

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	CTGCGCGG	GATAGTCGTGGTTATCACTAC	GGCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGCGCGGGATAGTCGTGGTTATCACTACGGCCTCTACTTTGACTAC	ARPARDSRGYHYGLYFDY	296	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	82	82	68	2	12	82.9
CDR1-IMGT	83	106	24	22	2	0	91.7
FR2-IMGT	107	157	51	48	3	0	94.1
CDR2-IMGT	158	181	24	24	0	0	100
FR3-IMGT	182	295	114	114	0	0	100
CDR3-IMGT (germline)	296	302	7	7	0	0	100
Total	N/A	N/A	302	283	7	12	93.7


Alignments

                                      <------------------------------------FR1-IMGT------------------------------------><-------
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  F  L  R  I  S  C  K  G  S  G  Y  G  S  G  Y  S
                    Query_5576   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTTTCTGAGGATCTCCTGTAAGGGTTCTGGATACGGTTCTGGATACAG  90
V  93.7% (283/302)  IGHV5-51*01  6    ............................................C.....A.................------------..........  83
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G              S  G  Y  S

                                      CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------
                                        F  T  S  Y  W  I  G  W  A  R  Q  M  P  G  K  G  L  E  W  I  G  V  I  Y  P  G  D  S  D  T
                    Query_5576   91   CTTTACCAGTTATTGGATCGGCTGGGCGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATAGGGGTCATCTATCCTGGTGACTCTGATAC  180
V  93.7% (283/302)  IGHV5-51*01  84   .........C..C.............T.................................G...A.........................  173
                                        F  T  S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T

                                      ><----------------------------------------------------FR3-IMGT----------------------------
                                        R  Y  S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A
                    Query_5576   181  CAGATACAGCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGC  270
V  93.7% (283/302)  IGHV5-51*01  174  ..........................................................................................  263
                                        R  Y  S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A

                                      ------------------------><----------------------CDR3-IMGT--------------------->           
                                        S  D  T  A  M  Y  Y  C  A  R  P  A  R  D  S  R  G  Y  H  Y  G  L  Y  F  D  Y  W  G  Q  G
                    Query_5576   271  CTCGGACACCGCCATGTATTACTGTGCGAGACCTGCGCGGGATAGTCGTGGTTATCACTACGGCCTCTACTTTGACTACTGGGGCCAGGG  360
V  93.7% (283/302)  IGHV5-51*01  264  ................................----------------------------------------------------------  295
                                        S  D  T  A  M  Y  Y  C  A  R                                                            
D  90.5% (19/21)    IGHD3-22*01  11   ----------------------------------------......A........T.....-----------------------------  31
J  100.0% (47/47)   IGHJ4*02     2    ------------------------------------------------------------------........................  25

                                                             
                                        T  L  V  T  V  S  S  
                    Query_5576   361  AACCCTGGTCACCGTCTCCTCAG  383
J  100.0% (47/47)   IGHJ4*02     26   .......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_52974

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     3e-90
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	242	26	6	88.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_5577   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.3% (242/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_5577   91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.3% (242/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_5577   181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.3% (242/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_5577   271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.3% (242/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_52977

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	221	24	6	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  E  K  G 
                    Query_5578   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGAGAAGGGC  90
V  88.0% (221/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C....G......G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_5578   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.0% (221/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_5578   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.0% (221/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_5578   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_322288

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            350     8e-99
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTACT	AGGCTATTGTAGCAGTACCAACTGCT	TTTCCCTCTCAGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTACTAGGCTATTGTAGCAGTACCAACTGCTTTTCCCTCTCAGCCTTTGACTAC	ARLLGYCSSTNCFSLSAFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5579  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-7*03  47   ........................................T.................................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  V  D  G  S  Q  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5579  91   AGTGGGTGGCCAACATAAAGGTAGATGGAAGTCAGACATATTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  95.2% (236/248)  IGHV3-7*03  137  ....................CA..........G...A...C............................................C....  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------------CD
                                     K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  L  L  G  Y  C  S  S  
                    Query_5579  181  AGAATTCATTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGCGCGAGACTACTAGGCTATTGTAGCAGTA  270
V  95.2% (236/248)  IGHV3-7*03  227  ....C...C...A.......................................G........T......----------------------  294
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.5% (23/26)    IGHD2-2*01  1    -------------------------------------------------------------------------...A........T....  17

                                     R3-IMGT------------------------>                                  
                                     T  N  C  F  S  L  S  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5579  271  CCAACTGCTTTTCCCTCTCAGCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  88.5% (23/26)    IGHD2-2*01  18   ...G.....---------------------------------------------------------  26
J  100.0% (44/44)   IGHJ4*02    5    ----------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_113411

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD2-2*01                                                                                            14.1    8.5   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCACCA	CTATGCC	TATGCCGGCGGGGGATATG	TTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACCACTATGCCTATGCCGGCGGGGGATATGTTGAATCC	ARGHHYAYAGGGYVES	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  T  W  I  R  Q  H  P  G  K  A 
                    Query_5580   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGCC  90
V  97.2% (243/250)  IGHV4-31*03  49   .............................................................G..........................G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       P  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  T  S 
                    Query_5580   91   CCGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCAGTAGACACGTCT  180
V  97.2% (243/250)  IGHV4-31*03  139  .T..................................................................T.C...................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  H  Y  A  Y  A 
                    Query_5580   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGGTCACCACTATGCCTATGCC  270
V  97.2% (243/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD2-2*01   25   -----------------------------------------------------------------------------.......------  31

                                      GT------------------>                                  
                                       G  G  G  Y  V  E  S  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_5580   271  GGCGGGGGATATGTTGAATCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  325
J  92.9% (39/42)    IGHJ4*02     7    -------------....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_339164

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           304     9e-85
IGHD2-15*01                                                                                           21.8    0.039
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AAAGTCT	GATATTGTAGT	CCC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGTCTGATATTGTAGTCCCTATGGACGTC	AKSDIVVPMDV	239	271	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	49	2	0	96.1
CDR2-IMGT	101	124	24	18	6	0	75
FR3-IMGT	125	238	114	108	6	0	94.7
CDR3-IMGT (germline)	239	240	2	2	0	0	100
Total	N/A	N/A	226	210	16	0	92.9


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  
                    Query_5581   15   GTGCAGCCTCTGGATTCACCTTCAGTACCTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCGTACATTT  104
V  92.9% (210/226)  IGHV3-21*01  65   ...........................G......C...............................................A.C....A  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  V  G  T  Y  I  E  Y  A  S  S  V  K  G  R  F  T  V  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_5581   105  CTAGTGTTGGTACTTACATAGAGTACGCAAGCTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCAAGAACTCACTGTATCTGC  194
V  92.9% (210/226)  IGHV3-21*01  155  G....AG.A...G.......T.C......GA......................A....................................  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-----------CDR3-IMGT----------->             
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  S  D  I  V  V  P  M  D  V  X  X  Q  G  
                    Query_5581   195  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGCAAAGTCTGATATTGTAGTCCCTATGGACGTCTNNNNCCAAGGGA  284
V  92.9% (210/226)  IGHV3-21*01  245  .......................................A......--------------------------------------------  290
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (11/11)   IGHD2-15*01  3    -----------------------------------------------------...........--------------------------  13
J  90.7% (39/43)    IGHJ6*02     20   -------------------------------------------------------------------...........GGGG........  42

                                                          
                                      T  T  V  T  V  S  S 
                    Query_5581   285  CCACGGTCACCGTCTCCTCA  304
J  90.7% (39/43)    IGHJ6*02     43   ....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_187302

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           346     2e-97
IGHD3-3*01                                                                                            14.1    8.5  
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	CTG	TTTTTGG	CGCAGCGAATGATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCTGTTTTTGGCGCAGCGAATGATAACTACGGTATGGACGTC	ARAVFGAANDNYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5582   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGGTATTGGATACACTGGGTCCGTCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-74*01  47   ..............................................C..C.....G...........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  H  I  N  S  D  G  S  T  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5582   91   TTTGGGTCTCACATATTAACAGTGATGGGAGTACCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-74*01  137  .G..........G......T.............G.....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  V  F  G  A  A  N  
                    Query_5582   181  AGAATACCCTGTATCTACAATTGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGAGCTGTTTTTGGCGCAGCGAATG  270
V  94.4% (235/249)  IGHV3-74*01  227  ....C..G........G...A...............................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-3*01   10   ------------------------------------------------------------------------.......-----------  16

                                      T------------------>                                 
                                      D  N  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5582   271  ATAACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  100.0% (50/50)   IGHJ6*02     13   ---..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_187303

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            352     3e-99
IGHD3-10*01                                                                                           43.0    2e-08
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GTGGCCCCT	TATTATTATGGTTCGGGGAGTTATT	CT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTGGCCCCTTATTATTATGGTTCGGGGAGTTATTCTTAC	AVAPYYYGSGSYSY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	235	10	0	95.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  A  F  W  M  T  W  V  R  Q  G  P  G  K  G  L  
                    Query_5583   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTTAGTGCCTTTTGGATGACCTGGGTCCGCCAGGGTCCAGGGAAGGGGCTGG  90
V  95.9% (235/245)  IGHV3-7*03   47   ....................G.......................AG..A........G..............C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  G  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5583   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGGGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.9% (235/245)  IGHV3-7*03   137  .................................A........................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  G  D  D  T  A  V  Y  Y  C  A  V  A  P  Y  Y  Y  G  S  
                    Query_5583   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGGCGACGACACGGCCGTGTATTACTGTGCGGTGGCCCCTTATTATTATGGTTCGG  270
V  95.9% (235/245)  IGHV3-7*03   227  ....C...............................C...G........................-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  96.0% (24/25)    IGHD3-10*01  2    --------------------------------------------------------------------------.....C..........  17

                                      ------------->                                  
                                      G  S  Y  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5583   271  GGAGTTATTCTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  96.0% (24/25)    IGHD3-10*01  18   .........---------------------------------------  26
J  100.0% (37/37)   IGHJ4*02     12   -----------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_51402

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  R  G  L 
                    Query_5584  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAGGGGTCTG  90
V  87.0% (214/246)  IGHV4-4*01  49   ..................G..G......G.........C.GC.GT................................A....A...G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_5584  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.0% (214/246)  IGHV4-4*01  139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_5584  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.0% (214/246)  IGHV4-4*01  229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01  13   ----------------------------------------------------------------------.....C..G...--------  24

                                     ----------->                                  
                                      G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_5584  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02    6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_187301

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5585   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_5585   91   CTCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..G...............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G 
                    Query_5585   181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .........................G................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5585   271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_43208

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           431     4e-123
IGHD2-2*01                                                                                            19.9    0.18  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACCG	TGTAGTAGTA	GTGCCTGTTATTCGCGT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACCGTGTAGTAGTAGTGCCTGTTATTCGCGTTACGGCATGGACGTC	ARVPCSSSACYSRYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	283	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_5586   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  97.6% (283/290)  IGHV1-69*01  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  F  I  P  P  F  G  T  A  N  H  A  Q
                    Query_5586   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGTTCATCCCTCCCTTTGGTACAGCAAATCACGCACA  180
V  97.6% (283/290)  IGHV1-69*01  96   .......................................................A........AT...............CT.......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_5586   181  GAAGTTCCAGGGAAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  97.6% (283/290)  IGHV1-69*01  186  ............C.............................................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  V  P  C  S  S  S  A  C  Y  S  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T
                    Query_5586   271  CGTGTATTACTGTGCGAGAGTACCGTGTAGTAGTAGTGCCTGTTATTCGCGTTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCAC  360
V  97.6% (283/290)  IGHV1-69*01  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD2-2*01   8    -------------------------..........-------------------------------------------------------  17
J  97.9% (47/48)    IGHJ6*02     15   ----------------------------------------------------.....T................................  52

                                                
                                        V  S  S 
                    Query_5586   361  CGTCTCCTCA  370
J  97.9% (47/48)    IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_187307

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD1-26*01                                                                                           10.3    113  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCGGAAGAA	GGGAG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGGAAGAAGGGAGATTGACTAC	AGGRREIDY	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	225	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  N  H  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5587   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTAATCACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.8% (225/240)  IGHV4-59*01  49   ........................................G..G.T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  D  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5587   91   TGGATTGGGTATCTTTATTACGATGGTGACACCAAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  93.8% (225/240)  IGHV4-59*01  139  ............A.C......AG...GAG......C......................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  G  R  R  E  I  D  Y  W  G 
                    Query_5587   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGGGCGGAAGAAGGGAGATTGACTACTGGGGC  270
V  93.8% (225/240)  IGHV4-59*01  229  ...............C...............................G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  9    ----------------------------------------------------------------------.....---------------  13
J  100.0% (42/42)   IGHJ4*02     7    ----------------------------------------------------------------------------..............  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_5587   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  100.0% (42/42)   IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_51406

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     8e-121
IGHD6-13*01                                                                                           14.1    9.8   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	ARHRYLGPRQQATENDY	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	111	3	0	97.4
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	283	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  Q  G  S  G  Y  T  F  T  
                    Query_5588   3    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTACCA  92
V  95.9% (283/295)  IGHV5-51*01  2    ..G...........................................G..................A...............G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  P  R  Y  
                    Query_5588   93   CCTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAGTCATCTATCCTGGTGACTCTGATCCCAGATACA  182
V  95.9% (283/295)  IGHV5-51*01  92   G...........G..........................................GA.......................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_5588   183  GCCCGTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTTGCAGTGGAGTAGCCTGAAGGCCTCGGACA  272
V  95.9% (283/295)  IGHV5-51*01  182  ..........................A................................C..........C...................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  M  Y  Y  C  A  R  H  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  Y  W  G  Q  G  T  L  V  
                    Query_5588   273  CCGCCATGTATTACTGTGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCA  362
V  95.9% (283/295)  IGHV5-51*01  272  .........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD6-13*01  8    -------------------------------------------.......----------------------------------------  14
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------.............................  36

                                                  
                                      T  V  S  S  
                    Query_5588   363  CCGTCTCCTCAG  374
J  100.0% (41/41)   IGHJ4*02     37   ............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_180243

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            246     2e-67
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ5*01                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAGGGGG	AGCAGTGGCTGGTAC	ACGGGCCCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGGGGGAGCAGTGGCTGGTACACGGGCCCCTTCGACTCC	ARVRGSSGWYTGPFDS	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	21	8	0	72.4
CDR1-IMGT	30	53	27	13	11	3	48.1
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	99	15	0	86.8
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	249	205	41	3	82.3


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  A     W  M  R  W  V  R  Q  A  P  G  K  G  
                    Query_5589   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACTTTCAGAAACGC---CTGGATGAGGTGGGTCCGCCAGGCTCCAGGGAAGGGGC  87
V  82.3% (205/249)  IGHV4-4*02   47   ..A.....TCC...A....C..T.T......TGG.T.CA....C.GTAGTAA....TG...T............C.C.............  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  S  G  S  A  N  Y  Q  P  S  L  W  S  R  V  T  I  S  L  D  R  S  
                    Query_5589   88   TGGAGTGGATTGGAGAAATCTATCATAGTGGGAGCGCCAACTATCAGCCGTCCCTCTGGAGCCGAGTCACCATATCACTAGACAGGTCCA  177
V  82.3% (205/249)  IGHV4-4*02   137  .............G.....................A.......CA.C.........AA...T...............G......A.....  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  M  D  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  G  S  S  G  W  
                    Query_5589   178  AGAACCAGTTCTCCATGGACTTGAACTCAGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGAGAGTAAGGGGGAGCAGTGGCTGGT  267
V  82.3% (205/249)  IGHV4-4*02   227  ..............C..A.GC...G...T.......................G................---------------------  295
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD6-19*01  7    -----------------------------------------------------------------------------.............  19

                                      T------------------>                                  
                                      Y  T  G  P  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_5589   268  ACACGGGCCCCTTCGACTCCTGGGGCCAGGGAATCCTGGTCACCGTCTCGTCAG  321
D  100.0% (15/15)   IGHD6-19*01  20   ..----------------------------------------------------  21
J  93.0% (40/43)    IGHJ5*01     9    -----------.................A....C...............C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_51408

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD4-17*01                                                                                           14.1    8.5  
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGAATAC	AG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGAATACAGCAACTGGGTCGACCCC	ARDSGEYSNWVDP	250	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	135	27	19	2	6	70.4
FR3-IMGT	136	249	114	105	9	0	92.1
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	233	18	6	90.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  V  S  S  G  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_5590   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCGTCAGCAGTGGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGG  90
V  90.7% (233/257)  IGHV4-61*01  49   ...................C...........G.............................G...........................A  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  H  I  Y  N  Y  N  R  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D 
                    Query_5590   91   CTGGAGTGGATCGGTCATATCTATAACTATAACAGAGGGAGCACCAATTATAATCCCTCCCTCCAAAGTCGAGTCACCATATCAGTAGAC  180
V  90.7% (233/257)  IGHV4-61*01  139  ...........T..GT........T..------..T...........C..C..C.........A.G........................  222
                                       L  E  W  I  G  Y  I  Y  Y        S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------CDR3-I
                                       T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  G  E  Y 
                    Query_5590   181  ACATCCAAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATTCCGGTGAATAC  270
V  90.7% (233/257)  IGHV4-61*01  223  ..G........................C...G...........................G.................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  90.0% (9/10)     IGHD4-17*01  7    --------------------------------------------------------------------------------......C...  16

                                      MGT-------------->                                  
                                       S  N  W  V  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5590   271  AGCAACTGGGTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  98.0% (49/50)    IGHJ5*02     2    --.......T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_51409

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           274     8e-76
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	242	3	3	0	0	100
Total	N/A	N/A	239	207	32	0	86.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  G  S  I  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_5591   4    CCCTGAGACTCTCCTGCTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAAT  93
V  86.6% (207/239)  IGHV4-59*01  50   .....TCC...A.....A......................T.GT.A...C....G.............C...................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  M  F  V  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R  
                    Query_5591   94   GGATTGCCTATATGTTCGTCAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGAC  183
V  86.6% (207/239)  IGHV4-59*01  140  ......GG.....C.ATTA...............C..C...........C.....................G.A.............AC.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G  
                    Query_5591   184  ACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGTG  273
V  86.6% (207/239)  IGHV4-59*01  230  .G...........G....G............T..............G............-------------------------------  288
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  93.3% (14/15)    IGHD3-22*01  7    ----------------------------------------------------------------------------..........A...  20

                                      ---------------------->                                  
                                      G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5591   274  GCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  330
D  93.3% (14/15)    IGHD3-22*01  21   .--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    -------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_187308

Length=407
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           380     1e-107
IGHD1-26*01                                                                                           18.0    0.69  
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCGAGACGTCCCCTTAC	AGTGGGAACTAC	AACAAAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCGAGACGTCCCCTTACAGTGGGAACTACAACAAAGTACTACCACTACGGTATAGACGTC	ARHPRRPLTVGTTTKYYHYGIDV	282	350	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	68	56	53	3	0	94.6
CDR1-IMGT	69	92	24	20	4	0	83.3
FR2-IMGT	93	143	51	50	1	0	98
CDR2-IMGT	144	167	24	22	2	0	91.7
FR3-IMGT	168	281	114	107	7	0	93.9
CDR3-IMGT (germline)	282	289	8	8	0	0	100
Total	N/A	N/A	277	260	17	0	93.9


Alignments

                                      <-----------------------FR1-IMGT-----------------------><-------CDR1-IMGT------><---------
                                         G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  S  Y  W  I  G  W  
                    Query_5592   13   CTGGTGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCCGGATACAGCTTTATTAGTTATTGGATCGGTTGGG  102
V  93.9% (260/277)  IGHV5-51*01  20   ....A.................C................................T.............CC..C..C........C....  109
                                         G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W  I  G  W  

                                      -----------FR2-IMGT---------------------><-------CDR2-IMGT------><------------------------
                                      V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  N  P  S  F  E  G  
                    Query_5592   103  TGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCCGGTGACTCGGATACCAGATACAACCCGTCCTTCGAAGGCC  192
V  93.9% (260/277)  IGHV5-51*01  110  .................................................T........T.............G..........C......  199
                                      V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S  F  Q  G  

                                      ----------------------------FR3-IMGT----------------------------------------------------><
                                      Q  V  T  I  S  V  D  M  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  S  A  M  Y  Y  C  
                    Query_5592   193  AGGTCACCATCTCCGTCGACATGTCCATCAGCACCGCCTACCTCCAGTGGAGCAGCCTGAAGGCCTCGGACAGCGCCATGTATTACTGTG  282
V  93.9% (260/277)  IGHV5-51*01  200  .............A.C.....A.....................G............................C.................  289
                                      Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M  Y  Y  C  

                                      -----------------------------CDR3-IMGT----------------------------->                      
                                      A  R  H  P  R  R  P  L  T  V  G  T  T  T  K  Y  Y  H  Y  G  I  D  V  W  G  L  G  T  T  V  
                    Query_5592   283  CGAGACATCCGAGACGTCCCCTTACAGTGGGAACTACAACAAAGTACTACCACTACGGTATAGACGTCTGGGGCCTAGGGACCACGGTCA  372
V  93.9% (260/277)  IGHV5-51*01  290  .......-----------------------------------------------------------------------------------  296
                                      A  R                                                                                      
D  91.7% (11/12)    IGHD1-26*01  6    -------------------------.......G....-----------------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------......T..........G.............A..............  51

                                                 
                                      T  V  S  S 
                    Query_5592   373  CCGTCTCCTCA  383
J  94.7% (54/57)    IGHJ6*02     52   ...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39867768


Query= Query_187309

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           332     3e-93
IGHD1-26*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGCCCGCTGCCCGTG	GTGGGAGCTA	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATCAGCCCGCTGCCCGTGGTGGGAGCTATGACTAC	ARDQPAARGGSYDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	50	1	0	98
CDR2-IMGT	102	125	24	18	6	0	75
FR3-IMGT	126	239	114	113	1	0	99.1
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	232	222	10	0	95.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  N  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  L  W  V  S  R  I  
                    Query_5593   16   GTGCAGCCTCTGGATTCACCTTCAATACCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGCTGTGGGTCTCACGTATTA  105
V  95.7% (222/232)  IGHV3-74*01  65   ........................G..G...........................................G..................  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  T  V  G  T  D  I  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  
                    Query_5593   106  ATACTGTTGGGACTGACATAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTGC  195
V  95.7% (222/232)  IGHV3-74*01  155  ...G..A.....G.AG..C.......................................................................  244
                                      N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Q  P  A  A  R  G  G  S  Y  D  Y  W  
                    Query_5593   196  AAATGGACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGATCAGCCCGCTGCCCGTGGTGGGAGCTATGACTACTGGG  285
V  95.7% (222/232)  IGHV3-74*01  245  .....A..............................................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (10/10)   IGHD1-26*01  7    ---------------------------------------------------------------------..........-----------  16
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------...........  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_5593   286  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (41/41)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_180240

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           347     7e-98
IGHD3-3*01                                                                                            10.3    123  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTCTTC	TTTTT	CTCCAAGAGAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTCTTCTTTTTCTCCAAGAGAGAGTCTACTACTTTGACTAC	ARSLLFLQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  K  S  G  G  Y  Y  W  S  W  V  R  Q  H  P  G  K  G 
                    Query_5594   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAAGAGTGGTGGCTACTACTGGAGCTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (235/248)  IGHV4-31*03  49   ..................................C.....GC........T...............A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  A  T  S 
                    Query_5594   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGCCACGTCT  180
V  94.8% (235/248)  IGHV4-31*03  139  ..................................G.............C......................C........A.A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  S  L  L  F  L  Q  E 
                    Query_5594   181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACTGTCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTCTTCTTTTTCTCCAAGAG  270
V  94.8% (235/248)  IGHV4-31*03  229  .....................C....C..........C..............................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD3-3*01   10   ----------------------------------------------------------------------------.....---------  14

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5594   271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_204643

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            366     2e-103
IGHD3-3*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGTAGTCAAG	ACGATTTTTGGAGTGGTT	TGTTCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTAGTCAAGACGATTTTTGGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTC	ARDGSQDDFWSGLFHYYYGMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  P  P  G  K  G  L  
                    Query_5595  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGGTATTGGATGAGTTGGGTCCGCCAACCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-7*03  47   ..............................................C...........C...........GG..................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_5595  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (242/250)  IGHV3-7*03  137  ........................................................A.................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><---------------------------
                                     K  N  S  V  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  Q  D  D  F  
                    Query_5595  181  AGAACTCAGTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAGAGATGGTAGTCAAGACGATTTTT  270
V  96.8% (242/250)  IGHV3-7*03  227  ........C........C..................................G.................--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-3*01  6    ---------------------------------------------------------------------------------.........  14

                                     -CDR3-IMGT--------------------------->                                 
                                     W  S  G  L  F  H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5595  271  GGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  100.0% (18/18)   IGHD3-3*01  15   .........--------------------------------------------------------------  23
J  96.4% (54/56)    IGHJ6*02    7    ---------------.......C..C.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_322284

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	276	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_5596   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  96.5% (276/286)  IGHV5-51*01  6    ..................................................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_5596   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  96.5% (276/286)  IGHV5-51*01  96   ......................A.......G.............G..........................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_5596   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAGCACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  96.5% (276/286)  IGHV5-51*01  186  ....................C...................A...........................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5596   271  CGTGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.5% (276/286)  IGHV5-51*01  276  .A..............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_204641

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           321     6e-90
IGHD3-16*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	GGTGGAAATTA	TTTGGGG	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGTGGAAATTATTTGGGGGGTATGGACGTC	AGGNYLGGMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  Y  Y  T  M  Y  W  V  R  Q  V  P  G  R  G  L  
                    Query_5597   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATTATTATACCATGTACTGGGTCCGTCAAGTTCCGGGGAGGGGTCTGG  90
V  91.8% (225/245)  IGHV3-43*01  47   ............................................G...........C...............C........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  I  S  W  D  G  E  T  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  G  
                    Query_5597   91   AGTGGGTCTCTCTTATTAGTTGGGATGGTGAGACTACAGACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACACCGGCA  180
V  91.8% (225/245)  IGHV3-43*01  137  ..............................GT.GC...T.............................................A.A...  226
                                      E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  R  S  L  F  L  Q  M  N  S  L  I  S  E  D  T  A  L  Y  Y  C  A  G  G  N  Y  L  G  G  M  
                    Query_5597   181  AAAGGTCCCTCTTTCTGCAGATGAACAGTCTGATAAGTGAAGACACCGCCTTATATTACTGTGCAGGTGGAAATTATTTGGGGGGTATGG  270
V  91.8% (225/245)  IGHV3-43*01  227  ...AC.....G.A......A.............G..C...G...........G............-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  15   ----------------------------------------------------------------------------.......-------  21
J  97.8% (44/45)    IGHJ6*02     18   -----------------------------------------------------------------------------------.......  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5597   271  ACGTCTGGGGCCAAGGGACAACGGTCACCGTCTCCTCA  308
J  97.8% (44/45)    IGHJ6*02     25   ...................C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_204640

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           366     2e-103
IGHD6-13*01                                                                                           18.0    0.57  
IGHJ5*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGTGG	GCAGCAGCT	ACA	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGTGGGCAGCAGCTACACGACCAC	AKDRGQQLHDH	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5598   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-30*18  47   ....................................C.........C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  N  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5598   91   AGTGGGTGGCAGTTATATCAAATGATGGAAGTAATAAATACTATGCAGATTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.8% (242/250)  IGHV3-30*18  137  ....................T............................C........................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  R  G  Q  Q  L  H  
                    Query_5598   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGGGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCGTGGGCAGCAGCTACACG  270
V  96.8% (242/250)  IGHV3-30*18  227  ..................................A..T...........T..G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD6-13*01  8    ----------------------------------------------------------------------------.........-----  16
J  97.6% (40/41)    IGHJ5*02     11   ----------------------------------------------------------------------------------------..  12

                                      ---->                                  
                                      D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5598   271  ACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.6% (40/41)    IGHJ5*02     13   ...C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_204645

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD2-2*02                                                                                            12.2    32    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCA	CTGGTATAC	TTACGTCAGCGGGGGATATG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTGGTATACTTACGTCAGCGGGGGATATGTTGACTAC	ARGHWYTYVSGGYVDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5599   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S 
                    Query_5599   91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGCTACCATATCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ................A.................G................................T......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  W  Y  T  Y  V 
                    Query_5599   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCACTGGTATACTTACGTC  270
V  97.6% (244/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (8/9)      IGHD2-2*02   22   --------------------------------------------------------------------------...C.....-------  30

                                      GT------------------>                                  
                                       S  G  G  Y  V  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_5599   271  AGCGGGGGATATGTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  325
J  97.6% (41/42)    IGHJ4*02     7    -------------.............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_204644

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           290     2e-80
IGHD6-6*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTCTG	CTTAGTGGGTGGCCGTG	ATAGCAGCTCGTCC	GGCCTGAG	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TTAGTGGGTGGCCGTGATAGCAGCTCGTCCGGCCTGAGCGTC	LVGGRDSSSSGLSV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	241	113	102	11	0	90.3
Total	N/A	N/A	241	213	28	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  G  S  G  F  I  F  S  D  Y  G  V  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_5600   1    GGTCCCTGAGACTCTCCTGTTCAGGCTCTGGATTCATCTTCAGTGACTATGGTGTACAGTGGGTCCGCCAGGCTCCAGGAAAGGGACTGG  90
V  88.4% (213/241)  IGHV3-64*05  47   ........................C...........C.......AG.....C.A.G..C....................G..........  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  A  I  G  G  H  G  T  T  T  Y  Y  T  D  P  L  K  G  R  F  I  V  S  R  D  N  S  
                    Query_5600   91   AATTTGTTTCGGCTATTGGTGGTCATGGGACTACCACATACTACACAGACCCACTGAAGGGCAGATTCATCGTCTCCAGAGACAATTCCA  180
V  88.4% (213/241)  IGHV3-64*05  137  ...A......A......A..A..A.....GG..G..........G.....T..G...............C.A..................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  V  Y  L  Q  M  S  N  L  R  I  E  D  T  A  V  Y  F  C  L  V  G  G  R  D  S  S  S  
                    Query_5600   181  AGAACACGGTGTATCTTCAAATGAGCAATCTGAGAATTGAGGACACGGCTGTGTATTTCTGCTTAGTGGGTGGCCGTGATAGCAGCTCGT  270
V  88.4% (213/241)  IGHV3-64*05  227  ........C.....G............G.......GC....................A...-----------------------------  287
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y                                
D  100.0% (14/14)   IGHD6-6*01   5    ------------------------------------------------------------------------------............  16

                                      ------------->                                 
                                      S  G  L  S  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5600   271  CCGGCCTGAGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
D  100.0% (14/14)   IGHD6-6*01   17   ..---------------------------------------------  18
J  100.0% (37/37)   IGHJ6*02     26   ----------.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_180246

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           280     1e-77
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAG	N/A	N/A	GTCTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGGTCTTTTTGACGTC	TRGLFDV	249	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	134	30	23	7	0	76.7
FR3-IMGT	135	248	114	94	20	0	82.5
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	217	38	0	85.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  L  G  D  Y  A  M  S  W  V  R  Q  V  P  G  K  G  P  
                    Query_5601   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTTACACTTGGTGATTATGCTATGAGTTGGGTCCGCCAGGTTCCAGGGAAGGGGCCGG  90
V  85.1% (217/255)  IGHV3-49*04  47   .........................T........C..CT...................C.............C..............T..  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  I  A  F  I  R  S  N  G  Y  G  G  A  T  E  Y  A  A  S  V  K  G  R  F  E  V  S  R  D  
                    Query_5601   91   AGTGGATAGCCTTTATTCGAAGTAATGGCTATGGTGGGGCTACAGAATATGCCGCCTCTGTGAAAGGCAGATTCGAAGTCTCAAGAGATG  180
V  85.1% (217/255)  IGHV3-49*04  137  .....G...GT..C...A....C..A.CT.........A.A........C.....G..................ACCA............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----CDR3-IMGT-----> 
                                      D  H  N  S  L  V  Y  L  Q  L  N  S  L  K  I  E  D  T  A  I  Y  F  C  T  R  G  L  F  D  V  
                    Query_5601   181  ATCACAACAGCCTCGTCTACCTGCAACTGAATAGCCTGAAAATCGAAGACACAGCCATATATTTTTGTACTAGAGGTCTTTTTGACGTCT  270
V  85.1% (217/255)  IGHV3-49*04  227  ..TC...A...A...C...T......A....C..........C...G.........G.G....AC..........---------------  301
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
J  95.3% (41/43)    IGHJ4*02     6    --------------------------------------------------------------------------------......TA..  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5601   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  95.3% (41/43)    IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_37073

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_5602   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_5602   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_5602   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_5602   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_204648

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GTTAGCGGG	GATAGTAG	CATCTAGTGCAGTTAGAGCGGACTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTTAGCGGGGATAGTAGCATCTAGTGCAGTTAGAGCGGACTTT	AKLAGIVASSAVRADF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	10	1	0	90.9
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	20	4	0	83.3
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	229	220	9	0	96.1


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  V  
                    Query_5603   14   GTACAGCCTCTGGATTCACCTTTAGTACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTGTCA  103
V  96.1% (220/229)  IGHV3-23*01  65   ..G......................C.G..........................................................A.T.  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  G  A  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_5603   104  GTGGTAGTGGTGGTGCCACATTCTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGC  193
V  96.1% (220/229)  IGHV3-23*01  155  ..............AG.....A....................................................................  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  L  A  G  I  V  A  S  S  A  V  R  A  D  
                    Query_5603   194  AAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAAGTTAGCGGGGATAGTAGCATCTAGTGCAGTTAGAGCGGACT  283
V  96.1% (220/229)  IGHV3-23*01  245  .......................................A.........-----------------------------------------  293
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (8/8)     IGHD3-22*01  11   ----------------------------------------------------------........------------------------  18

                                      ->                                  
                                      F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5603   284  TTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (34/34)   IGHJ4*02     15   --..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_245538

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     1e-99
IGHD3-22*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGTC	ATTATTATGATA	AAAGCGATTATTGGAAGC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTCATTATTATGATAAAAGCGATTATTGGAAGCACTTTGACTAC	ARGGHYYDKSDYWKHFDY	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  F  Y  H  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5604   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGCGGTTTTTACCACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.2% (238/250)  IGHV4-31*03  49   ....................................A.......T...GG....T.......C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_5604   91   CTGGAGTGGATTGGGTACATCTATAACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACGATATCAGTAGACACGTCT  180
V  95.2% (238/250)  IGHV4-31*03  139  ........................T.........G...............................G....C..................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  N  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  H  Y  Y  D  K 
                    Query_5604   181  AAGAACCAGCTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGGGGGTCATTATTATGATAAA  270
V  95.2% (238/250)  IGHV4-31*03  229  .........T...........................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD3-22*01  3    ----------------------------------------------------------------------------....C.......--  14

                                      -IMGT--------------------->                                  
                                       S  D  Y  W  K  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5604   271  AGCGATTATTGGAAGCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  100.0% (45/45)   IGHJ4*02     4    ----------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_245539

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43D*01                                                                                          382     4e-108
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43D*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TAAAGAGGGCCGAATTCTCGGA	TATTAGTATGGTTCGAGGAGT	CCCCACTATATCTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATATAAAGAGGGCCGAATTCTCGGATATTAGTATGGTTCGAGGAGTCCCCACTATATCTCACTACTACTATGGTATGGACGTC	AKDIKRAEFSDISMVRGVPTISHYYYGMDV	243	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	252	10	10	0	0	100
Total	N/A	N/A	252	248	4	0	98.4


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5605    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATACACTGGGTCCGTCAAGCTCCGGGGAAGGGTCTGG  90
V  98.4% (248/252)  IGHV3-43D*01  47   .......................................................G..................................  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  S  L  I  S  W  D  G  G  N  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5605    91   AGTGGGTCTCTCTTATTAGTTGGGATGGTGGTAACACACACTATGCAGACTCTGTGAAGGGTCGATTCACCATCTCCAGAGACAACAGCA  180
V  98.4% (248/252)  IGHV3-43D*01  137  .................................G...CT...................................................  226
                                       E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><---------------------------
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  I  K  R  A  E  F  
                    Query_5605    181  AAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACCGCCTTGTATTACTGTGCAAAAGATATAAAGAGGGCCGAATTCT  270
V  98.4% (248/252)  IGHV3-43D*01  227  ........................................................................------------------  298
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                       -------------CDR3-IMGT--------------------------------------->                            
                                       S  D  I  S  M  V  R  G  V  P  T  I  S  H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_5605    271  CGGATATTAGTATGGTTCGAGGAGTCCCCACTATATCTCACTACTACTATGGTATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCT  360
D  90.5% (19/21)    IGHD3-10*01   2    ----.....C.........G.....-----------------------------------------------------------------  22
J  96.4% (54/56)    IGHJ6*02      7    ---------------------------------------..........C....................A...................  57

                                            
                                       S  S 
                    Query_5605    361  CCTCA  365
J  96.4% (54/56)    IGHJ6*02      58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_185739

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           288     4e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACTTTGACTTC	ARVSTSAYYFDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	214	30	0	87.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_5606   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGACAACCCCCAGGAAAGGGACTGGAG  90
V  87.7% (214/244)  IGHV4-59*01  49   .................................T........A.....T.C.........A....G..G........G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  S  F  D  T  S  K  R 
                    Query_5606   91   TGGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGTCCTTTGACACGTCCAAGAGG  180
V  87.7% (214/244)  IGHV4-59*01  139  .......GGT....C...........G.G..C...C................A..G............A..AG.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  Y  Y  F  D 
                    Query_5606   181  CAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATACTACTTTGAC  270
V  87.7% (214/244)  IGHV4-59*01  229  .............A....AGC..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-2*01   17   ---------------------------------------------------------------------......---------------  22
J  91.3% (42/46)    IGHJ4*02     1    -------------------------------------------------------------------------------...........  11

                                      -->                                
                                       F  W  G  R  G  T  L  V  V  V  S  S
                    Query_5606   271  TTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  305
J  91.3% (42/46)    IGHJ4*02     12   .A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_180245

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            321     6e-90
IGHD5-12*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TCAAAGG	GTGGCTA	GG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAAAGGGTGGCTAGGCTTTGACTAC	VKGWLGFDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  L  S  R  Y  W  M  S  W  V  R  Q  T  P  E  K  G  L  
                    Query_5607   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACCCTTAGTAGGTATTGGATGAGCTGGGTCCGCCAGACTCCAGAGAAGGGCCTGG  90
V  92.2% (224/243)  IGHV3-7*01   47   ................................T.....T.......C........................G......G......G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  K  N  Y  A  D  S  V  K  G  R  F  S  I  F  R  D  N  A  
                    Query_5607   91   AGTGGGTGGCCAACATAAAGGAAGATGGGAGTGAGAAAAACTATGCCGACTCTGTGAAGGGCCGATTCAGCATCTTCAGAGACAACGCCA  180
V  92.2% (224/243)  IGHV3-7*01   137  ....................C.......A.........T......TG......................C.....C..............  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K  G  W  L  G  F  D  Y  
                    Query_5607   181  AGAATTCATTGTATCTACAAATGAATAGTCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGTCAAAGGGTGGCTAGGCTTTGACTACT  270
V  92.2% (224/243)  IGHV3-7*01   227  ....C...C.......G........C..C.............................C....---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (7/7)     IGHD5-12*01  10   ----------------------------------------------------------------------.......-------------  16
J  100.0% (44/44)   IGHJ4*02     5    -------------------------------------------------------------------------------...........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5607   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (44/44)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_90939

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           349     3e-98
IGHD2-15*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	T	GGATATTGTCGTGGAGGTGCCTGCTACTC	AACGGGTCGGGGGACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGATATTGTCGTGGAGGTGCCTGCTACTCAACGGGTCGGGGGACTTTTGACTAC	ARHGYCRGGACYSTGRGTFDY	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  S  T  H  H  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_5608   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGACTCCATCAGCAGCAGTACTCACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.4% (237/251)  IGHV4-39*01  49   .............................T.G............T....G.T..T...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  V  Y  Y  S  G  R  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_5608   91   CTGGAGTGGATTGGGAGTGTCTATTATAGTGGGAGAACCTACGACAACCCGTCTCTCAAGAGTCGAGTCACCATATCTGTCGACACGTCC  180
V  94.4% (237/251)  IGHV4-39*01  139  ..................A................C......T..........C.......................C..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  H  G  Y  C  R  G  G 
                    Query_5608   181  AAGAATCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTTTTACTGTGCGAGACATGGATATTGTCGTGGAGGT  270
V  94.4% (237/251)  IGHV4-39*01  229  .....C.................................................A...............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.2% (25/29)    IGHD2-15*01  2    ------------------------------------------------------------------------.........A....T...  19

                                      CDR3-IMGT-------------------------->                                  
                                       A  C  Y  S  T  G  R  G  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5608   271  GCCTGCTACTCAACGGGTCGGGGGACTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  86.2% (25/29)    IGHD2-15*01  20   AG.........-----------------------------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_240820

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATGATC	GTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATCGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDRGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_5609   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAGTTA  90
V  94.8% (276/291)  IGHV5-51*01  6    .................................................................G.....................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  I  M  Y  P  D  D  S  D  I  R  Y  S  P
                    Query_5609   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATCGGGATCATGTATCCTGATGACTCTGATATCAGATACAGCCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ........G.......................................G........C.......G...........C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  G  T  A  Y  L  Q  W  R  S  L  K  A  S  A  P  A
                    Query_5609   181  GTCTTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCGGCACCGCCTACCTGCAGTGGAGGAGCCTGAAGGCCTCGGCCCCCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  ...C...C...................................A......................C................A.A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  F  C  A  R  H  G  D  D  R  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  P  G  T  T  V
                    Query_5609   271  CATATATTTCTGTGCGAGACATGGGGATGATCGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCCGGGGACCACGGT  360
V  94.8% (276/291)  IGHV5-51*01  276  ...G....A............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  90.9% (10/11)    IGHD1-26*01  7    --------------------------------.......C...-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------.......A.......................AA...........  49

                                                   
                                        T  V  S  S 
                    Query_5609   361  CACCGTCTCCTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_316479

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           388     5e-110
IGHD1-26*01                                                                                           10.3    134   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TCAGGCACGAGAA	GGGAG	GCGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGGCACGAGAAGGGAGGCGGGGCGAACGACTAC	VRHEKGGGANDY	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	290	1	1	0	0	100
Total	N/A	N/A	288	268	20	0	93.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P  
                    Query_5610   3    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCCA  92
V  93.1% (268/288)  IGHV5-51*03  2    ....G.....G......................................................................GC...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  A  D  S  D  T  R  Y  
                    Query_5610   93   ATTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAACATCTATCCTGCAGACTCTGACACCAGATACA  182
V  93.1% (268/288)  IGHV5-51*03  92   GC.......................................................T...........GT........T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  L  T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_5610   183  GTCTGACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACA  272
V  93.1% (268/288)  IGHV5-51*03  182  .C.C.T.....C.............................................................C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                
                                      S  G  V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5610   273  GCGGCGTGTATTATTGTGTCAGGCACGAGAAGGGAGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  357
V  93.1% (268/288)  IGHV5-51*03  272  C..C.A.......C....-------------------------------------------------------------------  289
                                      T  A  M  Y  Y  C                                                                     
D  100.0% (5/5)     IGHD1-26*01  9    -------------------------------.....-------------------------------------------------  13
J  97.4% (37/38)    IGHJ4*02     9    -----------------------------------------------....................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_316474

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           344     6e-97
IGHD1-26*01                                                                                           25.7    0.003
IGHJ1*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD1-26*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	ATC	GTATAGTGGAAGCTAC	AGGTT	CTTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAATCGTATAGTGGAAGCTACAGGTTCTTCCAACAC	AKESYSGSYRFFQH	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  E  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5611   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTTTGAGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-30*18  47   ..............................................C.A..GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  V  I  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5611   91   AGTGGGTGGCAGTTGTCATATATGATGGAAGTAACAAGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGGGACAATTCCA  180
V  94.0% (235/250)  IGHV3-30*18  137  ..............A.ATC...............T..A.........................................A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  I  Y  Y  C  A  K  E  S  Y  S  G  S  Y  
                    Query_5611   181  AGAACACGCTGTATCTGCAGATGAACAGCCTGAGAGTTGAGGACACGGCTATATATTACTGTGCGAAAGAATCGTATAGTGGAAGCTACA  270
V  94.0% (235/250)  IGHV3-30*18  227  ...................A................C.............G.G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD1-26*01  2    -------------------------------------------------------------------------.........G......-  17

                                      ------------->                                
                                      R  F  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5611   271  GGTTCTTCCAACACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTC  316
J  97.6% (41/42)    IGHJ1*01     9    ----......G...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_182459

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         333     1e-93
IGHD3-10*01                                                                                           16.1    2.4  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CATGGA	GGTCCGGGGAATTA	CCAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACATGGAGGTCCGGGGAATTACCAGTTTGACTAC	ARHGGPGNYQFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	94	20	0	82.5
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	251	38	0	86.9


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  T  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  D  T  K
                    Query_5612     1    GCAGCTGGTGCAGTCTGGAACAGAGGTGAAGAAGCCCGGAGAGTCTCTGAGGATCTCCTGTAAGGCTTCTGGATACAGTTTTGACACCAA  90
V  86.9% (251/289)  IGHV5-10-1*01  6    ...................G..........A........G.........................G............C...AC..G.T.  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  S  L  E  W  M  G  R  I  D  P  I  A  S  Y  P  H  S  N  S
                    Query_5612     91   GTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAAGCCTGGAGTGGATGGGGAGGATAGATCCCATTGCCTCTTATCCCCATTCCAACTC  180
V  86.9% (251/289)  IGHV5-10-1*01  96   C.......G.........................G......................T.....T.G..A.......A..A.C.A..G.C.  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  P  I  S  V  D  R  S  T  P  T  A  Y  M  Q  W  T  S  L  E  A  S  D  S  G
                    Query_5612     181  GTCCTTCCAAGGACACGTCCCCATCTCGGTTGACAGGTCCACCCCCACTGCCTACATGCAGTGGACCAGCCTGGAGGCCTCGGACAGCGG  270
V  86.9% (251/289)  IGHV5-10-1*01  186  ............C......A.......A.C.....A.....T.AG..........C.........G.......A............C..C  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          I  Y  F  C  A  R  H  G  G  P  G  N  Y  Q  F  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_5612     271  CATTTATTTCTGTGCGCGACATGGAGGTCCGGGGAATTACCAGTTTGACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  356
V  86.9% (251/289)  IGHV5-10-1*01  276  ...G....A.......A..-------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                    
D  85.7% (12/14)    IGHD3-10*01    11   -------------------------...T......G...-----------------------------------------------  24
J  97.7% (42/43)    IGHJ4*02       6    -------------------------------------------.........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_316476

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCGGAGGTTCC	ACTATGG	CCACCTGACACCAC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCGGAGGTTCCACTATGGCCACCTGACACCACTTGAGTAC	ASRRFHYGHLTPLEY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  N  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_5613   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAACTGGGTCCGCCAGACCCCAGGGAGGGGGCTGGAG  90
V  92.1% (223/242)  IGHV4-34*01  49   .......................................................G....A........C.........A..........  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  V  N  H  S  G  N  S  N  S  N  P  S  L  K  S  R  V  T  I  L  V  D  T  P  K  N 
                    Query_5613   91   TGGCTTGGGGAAGTCAATCATAGTGGCAACAGCAACTCCAACCCGTCCCTCAAGAGTCGAGTCACCATATTAGTCGACACGCCCAAGAAC  180
V  92.1% (223/242)  IGHV4-34*01  139  ...A........A.............A.G..C.....A................................C...A......T........  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  F  Y  Y  C  A  S  R  R  F  H  Y  G  H  L  T 
                    Query_5613   181  CAGTTCTCCCTGAAACTGACTTCTGTGACCGCCGCGGACACGGCTTTTTATTATTGTGCGAGTCGGAGGTTCCACTATGGCCACCTGACA  270
V  92.1% (223/242)  IGHV4-34*01  229  ..............G....GC........................G.G.....C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD3-10*01  6    -------------------------------------------------------------------------.......----------  12

                                      ----------->                                  
                                       P  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5613   271  CCACTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.6% (41/42)    IGHJ4*02     7    ----....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_316477

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           290     2e-80
IGHD3-10*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCCGCCGC	TTCGGGGA	CTTGACCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCCGCCGCTTCGGGGACTTGACCCTTGACTAC	ARDGRRFGDLTLDY	234	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	119	21	14	7	0	66.7
FR3-IMGT	120	233	114	104	10	0	91.2
CDR3-IMGT (germline)	234	241	8	8	0	0	100
Total	N/A	N/A	229	207	22	0	90.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  L  S  V  S  S  N  Y  M  S  W  F  R  Q  P  P  G  K  G  L  E  W  V  S  V  L  
                    Query_5614   13   GTGCAGTCTCTGGGCTCAGCGTCAGTAGCAACTACATGAGCTGGTTCCGCCAGCCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTCTTT  102
V  90.4% (207/229)  IGHV3-53*01  65   ......C.......T...C.........................G........G................................A...  154
                                         A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  

                                      --CDR2-IMGT-----><----------------------------------------------------FR3-IMGT------------
                                      Y  S  G  G  V  T  F  F  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  R  N  T  L  Y  L  Q  
                    Query_5614   103  ATAGTGGAGGAGTCACGTTCTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGATTCCAGGAACACATTGTATCTTCAAA  192
V  90.4% (207/229)  IGHV3-53*01  155  ....C..T..TAG...A.A..A........................................A......A......GC............  244
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  

                                      ----------------------------------------><----------------CDR3-IMGT--------------->       
                                      M  N  N  L  R  A  E  D  T  A  V  Y  F  C  A  R  D  G  R  R  F  G  D  L  T  L  D  Y  W  G  
                    Query_5614   193  TGAACAACCTCAGAGCCGAGGACACGGCCGTCTATTTCTGTGCGAGAGATGGCCGCCGCTTCGGGGACTTGACCCTTGACTACTGGGGCC  282
V  90.4% (207/229)  IGHV3-53*01  245  ......G...G....................G....A............-----------------------------------------  293
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                            
D  100.0% (8/8)     IGHD3-10*01  13   -----------------------------------------------------------........-----------------------  20
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------...............  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_5614   283  AGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (42/42)   IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_316470

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           420     7e-120
IGHD1-26*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTGTTTTC	TGGGACCTACTAC	CTTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTAC	ARVFSGTYYLLDY	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	111	3	0	97.4
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	281	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  T  A  F  G  Y  S  F  T  
                    Query_5615   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTACGGCTTTTGGATACAGCTTTACCA  91
V  95.9% (281/293)  IGHV5-51*03  2    ..................................................................A..G..C.................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  R  D  G  E  T  R  Y  
                    Query_5615   92   GTTATTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTCGTGACGGTGAAACCAGATACA  181
V  95.9% (281/293)  IGHV5-51*03  92   .C..C...............................................................G.....TC...T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  
                    Query_5615   182  GCCCGTCCTTCCAAGGCCAGGTCAGCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACA  271
V  95.9% (281/293)  IGHV5-51*03  182  ........................C....................................................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                
                                      T  A  M  Y  Y  C  A  R  V  F  S  G  T  Y  Y  L  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5615   272  CCGCCATGTATTATTGTGCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  359
V  95.9% (281/293)  IGHV5-51*03  272  .............C.........-----------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                  
D  92.3% (12/13)    IGHD1-26*01  8    -------------------------------.....G.......--------------------------------------------  20
J  100.0% (40/40)   IGHJ4*02     7    ------------------------------------------------........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_316471

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           322     2e-90
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAG	TGGAACGAC	GGG	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGAGTGGAACGACGGGGACGAC	ARHEWNDGDD	246	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  D  S  I  S  N  N  L  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_5616   4    CCCTGAGACTCTCCTGCAGTGTCTCTGGAGACTCCATCAGCAATAATCTTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  91.2% (228/250)  IGHV4-39*01  50   .....TCC...A......C.........T.G...........G..G.AG.......................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  A  I  Y  Y  T  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_5616   94   TGGAGTGGATTGGAGCTATCTATTATACTGGAAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCA  183
V  91.2% (228/250)  IGHV4-39*01  140  .............GAG...........G...G.G........................................................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  K  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  E  W  N  D  G  D  
                    Query_5616   184  AGAACAAGTTCTCCCTGAAGCTGACCTCTGTCACCGCCGCAGACACGGCTGTGTACTACTGTGCGAGACATGAGTGGAACGACGGGGACG  273
V  91.2% (228/250)  IGHV4-39*01  230  .....C..................G......G.......................T..............--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD1-1*01   9    --------------------------------------------------------------------------.........-------  17
J  97.5% (39/40)    IGHJ4*02     9    --------------------------------------------------------------------------------------...T  12

                                      ->                                  
                                      D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5616   274  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.5% (39/40)    IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_316472

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         388     5e-110
IGHD4-4*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTCGAGTGGAATCGAGTGAC	ACTACAGT	CCTTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCGAGTGGAATCGAGTGACACTACAGTCCTTCCTGACTCG	ATRVESSDTTVLPDS	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	71	0	0	100
CDR1-IMGT	78	101	24	18	6	0	75
FR2-IMGT	102	152	51	46	5	0	90.2
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	105	9	0	92.1
CDR3-IMGT (germline)	291	294	4	4	0	0	100
Total	N/A	N/A	288	268	20	0	93.1


Alignments

                                        <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                           Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  T  F  T  D  
                    Query_5617     7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACACCTTTACTGATT  96
V  93.1% (268/288)  IGHV5-10-1*01  5    ..............................................................................G......CAGC.  94
                                           Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  

                                        ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                        S  W  I  N  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  K  I  D  P  S  D  S  Y  T  N  Y  S  
                    Query_5617     97   CCTGGATCAACTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGAAAAATTGATCCTAGTGACTCTTATACCAACTACAGCC  186
V  93.1% (268/288)  IGHV5-10-1*01  95   A........G.............A............................G.GG..................................  184
                                        Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  

                                        -------------------------------------------FR3-IMGT---------------------------------------
                                        P  S  F  Q  G  H  V  T  M  S  I  D  T  S  I  S  T  A  F  L  Q  W  S  S  L  R  A  S  D  T  
                    Query_5617     187  CGTCCTTCCAAGGCCACGTCACCATGTCTATTGACACGTCCATCAGCACTGCCTTCCTGCAGTGGAGCAGCCTGAGGGCCTCGGACACCG  276
V  93.1% (268/288)  IGHV5-10-1*01  185  .........................C..AGC.....A.................A....................A..............  274
                                        P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                        -------------><-----------------CDR3-IMGT----------------->                               
                                        A  I  Y  F  C  A  T  R  V  E  S  S  D  T  T  V  L  P  D  S  W  G  Q  G  T  L  V  T  V  S  
                    Query_5617     277  CCATATATTTCTGTGCGACTCGAGTGGAATCGAGTGACACTACAGTCCTTCCTGACTCGTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  366
V  93.1% (268/288)  IGHV5-10-1*01  275  ....G....A........------------------------------------------------------------------------  292
                                        A  M  Y  Y  C  A                                                                          
D  100.0% (8/8)     IGHD4-4*01     3    --------------------------------------........--------------------------------------------  10
J  94.9% (37/39)    IGHJ4*02       8    ----------------------------------------------------.....AC...............................  45

                                         
                                        S
                    Query_5617     367  C  367
J  94.9% (37/39)    IGHJ4*02       46   .  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_316473

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            343     2e-96
IGHD3-3*01                                                                                            14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	GGAGTGG	ACCATAGCGCCACCTGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGAGTGGACCATAGCGCCACCTGGCTTGACTAT	AREGVDHSATWLDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	24	0	0	100
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	125	24	23	1	0	95.8
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	233	226	7	0	97


Alignments

                                     <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                      C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  L  A  K  I 
                    Query_5618  15   TGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGTTGGCCAAAATA  104
V  97.0% (226/233)  IGHV3-7*03  64   ..............................................................................G.......C...  153
                                      C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                     -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                      K  Q  D  G  T  E  K  Y  Y  V  D  S  V  R  G  R  S  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_5618  105  AAGCAAGATGGAACTGAGAAATACTATGTGGACTCTGTGAGGGGCCGATCCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTG  194
V  97.0% (226/233)  IGHV3-7*03  154  .............G..........................A........T........................................  243
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                     --------------------------------------------><----------------CDR3-IMGT--------------->   
                                      Q  M  N  S  L  R  A  E  D  S  A  V  Y  Y  C  A  R  E  G  V  D  H  S  A  T  W  L  D  Y  W 
                    Query_5618  195  CAAATGAACAGCCTGAGAGCCGAGGACTCGGCCGTGTATTATTGTGCGAGAGAAGGAGTGGACCATAGCGCCACCTGGCTTGACTATTGG  284
V  97.0% (226/233)  IGHV3-7*03  244  ...........................A.............C...........-------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (7/7)     IGHD3-3*01  15   ------------------------------------------------------.......-----------------------------  21
J  97.6% (41/42)    IGHJ4*02    7    -------------------------------------------------------------------------------.......C...  17

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_5618  285  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ4*02    18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_180249

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           347     7e-98
IGHD2-8*02                                                                                            16.1    2.1  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD2-8*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAC	TACTGGCGGTG	AA	GATAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTACTACTGGCGGTGAAGATATC	ARSTTGGEDI	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  F  Y  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_5619   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTTCTACATGACCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-11*06  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  S  S  R  S  G  H  S  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_5619   91   AATGGGTTTCATTCATTAGTAGTAGAAGTGGTCACTCAAACTACGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  94.8% (235/248)  IGHV3-11*06  137  .G..........A............T...A..T..A...................................A..................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      R  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  S  T  T  G  G  E  D  
                    Query_5619   181  GGAACTCACTGTTTTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAAGTACTACTGGCGGTGAAGATA  270
V  94.8% (235/248)  IGHV3-11*06  227  A...........A.C...................................G.................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD2-8*02   10   -------------------------------------------------------------------------......T....------  20
J  100.0% (38/38)   IGHJ3*02     11   --------------------------------------------------------------------------------------....  14

                                      ->                                
                                      I  W  G  Q  G  T  M  V  T  V  S  S
                    Query_5619   271  TCTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  304
J  100.0% (38/38)   IGHJ3*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_238637

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            350     8e-99
IGHD6-13*01                                                                                           19.9    0.16 
IGHJ3*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGCAC	CAGCAGCTGG	CACCCCAAACCTCG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCGCACCAGCAGCTGGCACCCCAAACCTCGTGATGCTTTTGATGTC	ARDRTSSWHPKPRDAFDV	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  T  N  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_5620   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGAGGCTCCATCAGCAGTACTAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.2% (236/248)  IGHV4-4*01   49   .............................T................G...........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  F  P  R  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  K 
                    Query_5620   91   GAGTGGATTGGGGAAATCTTTCCTAGAGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCACTAGACAAGTCCAAG  180
V  95.2% (236/248)  IGHV4-4*01   139  ...................A..A...T................................................G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                       N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  D  R  T  S  S  W  H  P 
                    Query_5620   181  AACCAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCGGACACGGCCGTATATTTCTGTGCGAGAGACCGCACCAGCAGCTGGCACCCC  270
V  95.2% (236/248)  IGHV4-4*01   229  ................A.C...G...........................G....G............----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (10/10)   IGHD6-13*01  9    --------------------------------------------------------------------------..........------  18

                                      GT--------------------->                                  
                                       K  P  R  D  A  F  D  V  W  G  Q  G  T  M  V  S  V  S  S  
                    Query_5620   271  AAACCTCGTGATGCTTTTGATGTCTGGGGCCAAGGGACAATGGTCTCCGTCTCTTCAG  328
J  98.0% (49/50)    IGHJ3*01     1    --------.....................................A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_96116

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGTACCA	N/A	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGTACCAACTGCTACTACCAAATGGACGTC	ARVDCSSTNCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_5621   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.0% (222/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_5621   91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.0% (222/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  N  C  Y 
                    Query_5621   181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTATTGTGCGAGAGTGGACTGTAGTAGTACCAACTGCTAC  270
V  91.0% (222/244)  IGHV4-59*01  229  C..............................CT..............G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD2-2*01   8    ---------------------------------------------------------------------.............--------  20
J  89.3% (50/56)    IGHJ6*02     7    ----------------------------------------------------------------------------------...A....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  T  V  I  V  S  S 
                    Query_5621   271  TACCAAATGGACGTCTGGGGCCTAGGGACCACGGTCATCGTCTCCTCA  318
J  89.3% (50/56)    IGHJ6*02     15   ...GGT................A..............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_182455

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            346     2e-97
IGHD6-19*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	CCCGGC	GGTCTAGCAGTGGCGGGTAC	CCCCAATAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGCCCGGCGGTCTAGCAGTGGCGGGTACCCCCAATATTTTGACTTC	ATARRSSSGGYPQYFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  S  W  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5622   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTCTTCTTGGTTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-7*01   47   ........................................T...AGC.A....A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  H  D  G  T  E  K  F  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5622   91   AGTGGGTGGCCAACATAAAGCATGATGGAACTGAGAAATTCTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-7*01   137  ......................A.......G........A..................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  T  A  R  R  S  S  S  G  
                    Query_5622   181  AGAACTCACTCTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTTCTGTGCGACAGCCCGGCGGTCTAGCAGTGGCG  270
V  94.4% (235/249)  IGHV3-7*01   227  ..........G.........................C....................A........G..---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (18/20)    IGHD6-19*01  2    ---------------------------------------------------------------------------...A..........T  16

                                      GT-------------------->                                  
                                      G  Y  P  Q  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5622   271  GGTACCCCCAATATTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  90.0% (18/20)    IGHD6-19*01  17   .....----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_53336

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           335     4e-94
IGHD6-6*01                                                                                            18.0    0.60 
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD6-6*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACATGGCTC	AGCAGTTCGTCC	TCCTTTTTGCCCCAGCCTCTT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACATGGCTCAGCAGTTCGTCCTCCTTTTTGCCCCAGCCTCTTGACCTC	ARTWLSSSSSFLPQPLDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  R  P  Y  P  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5623   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTAATTTCAGACCCTATCCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  93.1% (231/248)  IGHV3-64*01  47   ..................................C.CC.....TAG....G.T...C.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  V  I  T  T  N  G  E  S  T  Y  Y  A  K  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5623   91   AATATGTTTCAGTTATTACTACTAATGGGGAGAGCACATATTATGCAAAATCTGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (231/248)  IGHV3-64*01  137  ............C.....G..G........GT.................C........................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  F  C  A  R  T  W  L  S  S  S  S  
                    Query_5623   181  AGAACACGCTGTATCTTCAAATGGGCAGCCTGAGAGCTGAGGACATGGCTGTATATTTCTGTGCGAGAACATGGCTCAGCAGTTCGTCCT  270
V  93.1% (231/248)  IGHV3-64*01  227  ....................................................G....A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD6-6*01   7    -----------------------------------------------------------------------------.....C......-  18

                                      IMGT--------------------->                                  
                                      S  F  L  P  Q  P  L  D  L  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_5623   271  CCTTTTTGCCCCAGCCTCTTGACCTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  330
J  95.0% (38/40)    IGHJ5*02     12   --------------------....C......................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_324805

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           294     6e-82
IGHD3-10*01                                                                                           10.3    119  
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGA	CGGGG	GCTCCCCCTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACGGGGGCTCCCCCTATGATGCTCTTGACATC	ARDDGGSPYDALDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  P  C  A  A  P  G  F  S  I  R  D  Y  A  V  H  W  V  R  Q  A  P  G  T  G  L  
                    Query_5624   1    GGTCCCTGAGACTCCCCTGTGCAGCCCCAGGATTCAGTATCAGAGACTATGCTGTGCACTGGGTCCGCCAGGCTCCAGGCACGGGGCTGG  90
V  87.6% (219/250)  IGHV3-30*04  47   ..............T...........T.T.......CCT....TAG.......A...........................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  A  L  I  S  Y  D  G  T  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5624   91   ACTGGGTGGCTCTTATATCATATGATGGCACGAAGAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  87.6% (219/250)  IGHV3-30*04  137  .G........AG................A.GT..T..................................................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  E  T  V  Y  L  E  M  S  N  L  G  A  D  D  T  A  V  Y  F  C  A  R  D  D  G  G  S  P  Y  
                    Query_5624   181  GGGAGACGGTGTATCTGGAAATGAGCAACCTGGGGGCTGACGACACGGCTGTCTATTTCTGTGCGAGAGATGACGGGGGCTCCCCCTATG  270
V  87.6% (219/250)  IGHV3-30*04  227  A.A.C...C........C......A..G....A.A.....G...........G....A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  15   -------------------------------------------------------------------------.....------------  19
J  96.0% (48/50)    IGHJ3*02     1    ----------------------------------------------------------------------------------------..  2

                                      ------------->                                  
                                      D  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5624   271  ATGCTCTTGACATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  318
J  96.0% (48/50)    IGHJ3*02     3    .....T....T.....................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_240829

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           266     2e-73
IGHD3-10*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	GGGACATGTTAG	GGTTCGGGGA	CTTGGTTCCCCTTGCCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACATGTTAGGGTTCGGGGACTTGGTTCCCCTTGCCCAC	ARDMLGFGDLVPLAH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	96	18	0	84.2
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	208	38	0	84.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  S  Y  A  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5625   1    GGTCCCTGAGACTCTCCTGTGCGGTCTCTGGATTCACCTTTTCCAGTTATGCCATCTCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  84.6% (208/246)  IGHV3-23*01  47   ......................A.C................AG...C........GAG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  G  D  S  A  A  K  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  G  N  S  
                    Query_5625   91   AGTGGGTCTCTGGCATCGGTGACAGTGCTGCCAAGACATATTACGCAGACTCCGTGAGGGGCCGCTTCACCATCTCCAGAGGCAATTCCA  180
V  84.6% (208/246)  IGHV3-23*01  137  ..........A.CT..TA...GT....G..GT.GC.....C................A......G................A........  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  M  T  V  Y  L  Q  M  N  S  L  R  P  E  D  T  G  M  Y  F  C  A  R  D  M  L  G  F  G  D  
                    Query_5625   181  GAATGACAGTATATCTGCAAATGAACAGTCTGAGACCCGAGGACACGGGCATGTATTTCTGCGCGAGGGACATGTTAGGGTTCGGGGACT  270
V  84.6% (208/246)  IGHV3-23*01  227  AG.AC..GC.G.................C......G............C.G.A....A...T....------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD3-10*01  11   ------------------------------------------------------------------------------..........--  20

                                      ---------------->                                  
                                      L  V  P  L  A  H  W  G  Q  G  V  L  V  S  V  S  S  
                    Query_5625   271  TGGTTCCCCTTGCCCACTGGGGCCAGGGAGTCCTGGTCAGCGTCTCCTCAG  321
J  91.7% (33/36)    IGHJ4*02     13   ---------------..............AC........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_202490

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           438     5e-125
IGHD6-13*01                                                                                           12.2    36    
IGHJ3*02                                                                                              69.9    4e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGGAAGCGGGCCGCACA	TGGTAC	GC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGGAAGCGGGCCGCACATGGTACGCCTTTTGATATC	AWKRAAHGTPFDI	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	112	2	0	98.2
CDR3-IMGT (germline)	292	294	3	3	0	0	100
Total	N/A	N/A	290	285	5	0	98.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_5626   5    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  94
V  98.3% (285/290)  IGHV5-51*01  2    ....G.....G...............................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_5626   95   CCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  184
V  98.3% (285/290)  IGHV5-51*01  92   G.........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_5626   185  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  98.3% (285/290)  IGHV5-51*01  182  ................................................G.........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  A  I  Y  Y  C  A  W  K  R  A  A  H  G  T  P  F  D  I  W  G  Q  G  T  M  V  S  V  S  S  
                    Query_5626   275  CCGCCATTTATTACTGTGCGTGGAAGCGGGCCGCACATGGTACGCCTTTTGATATCTGGGGCCAGGGGACTATGGTCAGCGTCTCTTCAG  364
V  98.3% (285/290)  IGHV5-51*01  272  .......G............----------------------------------------------------------------------  291
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (6/6)     IGHD6-13*01  16   -------------------------------------......-----------------------------------------------  21
J  93.3% (42/45)    IGHJ3*02     6    ---------------------------------------------...................A.....A.......C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_90930

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            327     9e-92
IGHD3-10*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTGAC	TATTACGATGGTTC	AGGCAGGTCTTCTGGGGGCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTGACTATTACGATGGTTCAGGCAGGTCTTCTGGGGGCCGACTAC	ASLTITMVQAGLLGADY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  S  T  S  N  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_5627   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATCAGTACTAGTAACTGGTGGACTTGGGTCCGCCAGCCTCCAGGGAAGGGGCTG  90
V  92.7% (227/245)  IGHV4-4*02   49   ..................G............G.........C.G..............G...............C...............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  L  H  S  G  A  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  I  D  K  S  K 
                    Query_5627   91   GAGTGGATTGGGGAAATCCTTCACAGTGGGGCCACCAACTACAACCCGTCCCTCAGGAGTCGAGTCACCATCTCAATAGACAAGTCGAAG  180
V  92.7% (227/245)  IGHV4-4*02   139  ..................TA...T......AG.......................A...............A...G..........C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  T  I  T  M  V  Q  A 
                    Query_5627   181  AACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGCCTGACTATTACGATGGTTCAGGCA  270
V  92.7% (227/245)  IGHV4-4*02   229  ................A.....G...........................G..............-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  92.9% (13/14)    IGHD3-10*01  2    -----------------------------------------------------------------------......T.......-----  15

                                      -------------------->                                  
                                       G  L  L  G  A  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_5627   271  GGTCTTCTGGGGGCCGACTACTGGGGCCAGGGGTCCCTAGTCACCGTCTCCTCAG  325
J  92.5% (37/40)    IGHJ4*02     9    ---------------.................AA....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_202494

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           405     3e-115
IGHD2-8*02                                                                                            12.2    34    
IGHJ4*02                                                                                              54.5    1e-11 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	A	GTACTG	ACACC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTACTGACACCGACTAT	ARSTDTDY	285	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	71	70	68	2	0	97.1
CDR1-IMGT	72	95	24	22	2	0	91.7
FR2-IMGT	96	146	51	50	1	0	98
CDR2-IMGT	147	170	24	20	4	0	83.3
FR3-IMGT	171	284	114	108	6	0	94.7
CDR3-IMGT (germline)	285	290	6	6	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  D  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_5628   2    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCGGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  91
V  94.8% (274/289)  IGHV5-51*03  6    .............................A............G..................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  A  T  T  R  Y  S  P
                    Query_5628   92   CTGGATCGGCTGGGTGCGCCAGAGGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACGCTACTACCAGATACAGCCC  181
V  94.8% (274/289)  IGHV5-51*03  96   .......................T...............................A..............T..GA...............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  S  A
                    Query_5628   182  GTCGTTCGAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACAGCGC  271
V  94.8% (274/289)  IGHV5-51*03  186  ...C...C..............A................................C..............................C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------CDR3-IMGT------>                                  
                                        M  Y  Y  C  A  R  S  T  D  T  D  Y  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_5628   272  CATGTATTATTGTGCGAGAAGTACTGACACCGACTATTGGGGCCAGGGCTCCCTGGTCATCGTCTCCTCAG  342
V  94.8% (274/289)  IGHV5-51*03  276  .........C.........----------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                     
D  100.0% (6/6)     IGHD2-8*02   9    --------------------......---------------------------------------------  14
J  90.0% (36/40)    IGHJ4*02     9    -------------------------------.....C...........AA.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_202495

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD5-18*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              75.7    5e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGCCATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGCCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	240	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_5629   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAAAGACTGGAG  90
V  98.8% (240/243)  IGHV4-59*01  49   .........................................T......................................GG........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5629   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (240/243)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D 
                    Query_5629   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGCCATGGTTACGGAGGAGTTGAC  270
V  98.8% (240/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD5-18*01  6    ---------------------------------------------------------------......T........------------  20
J  97.6% (41/42)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_5629   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  307
J  97.6% (41/42)    IGHJ4*02     12   ..............................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_202497

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCGGCCGG	TTGTGGTAGTACCGGCTGCTATG	GAAAT	AACCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCGGCCGGTTGTGGTAGTACCGGCTGCTATGGAAATAACCGGTTCGACCCC	AREAAGCGSTGCYGNNRFDP	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_5630   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGCGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .............................................T...................................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  D  H  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5630   91   TGGATTGGGTATATCCATTACAGTGGGAGCACCGACCACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTTGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ...............T.................A..T...............................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  I  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  A  G  C  G  S  T  G 
                    Query_5630   181  CAGATCTCCCTGAAGGTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGAAGCGGCCGGTTGTGGTAGTACCGGC  270
V  95.1% (233/245)  IGHV4-59*01  229  ...T...........C...G...........................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.3% (21/23)    IGHD2-2*01   7    --------------------------------------------------------------------------....A........A..  22

                                      GT------------------------>                                  
                                       C  Y  G  N  N  R  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5630   271  TGCTATGGAAATAACCGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  91.3% (21/23)    IGHD2-2*01   23   .......------------------------------------------------------  29
J  98.0% (48/49)    IGHJ5*02     3    ------------...T.............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_202498

Length=312
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           377     8e-107
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCTG	N/A	N/A	C	ACTGG	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	253	84	82	2	0	97.6
Total	N/A	N/A	253	247	6	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  A  T  Y
                    Query_5631   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTGCCACCTA  90
V  97.6% (247/253)  IGHV5-51*03  6    .............................................................................G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  C  S  P
                    Query_5631   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATGCAGCCC  180
V  97.6% (247/253)  IGHV5-51*03  96   ............................................................................A......A......  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  H  W  G  Q  G  T
                    Query_5631   181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCACTGGGGCCAGGGAAC  270
V  97.6% (247/253)  IGHV5-51*03  186  ........A................................................................-----------------  258
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L                  
J  100.0% (36/36)   IGHJ4*02     13   --------------------------------------------------------------------------................  28

                                      ------------>       
                                        L  V  T  V  S  S  
                    Query_5631   271  CCTGGTCACCGTCTCCTCAG  290
J  100.0% (36/36)   IGHJ4*02     29   ....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30093435


Query= Query_202499

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHD3-16*01                                                                                           10.3    116  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGACGAGGGGCA	GGGGG	CGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGACGAGGGGCAGGGGGCGGTTGACTCT	ARVDEGQGAVDS	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  K  V  S  G  G  S  I  T  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5632   1    ACCCTGTCCCTCACCTGCAAGGTCTCTGGGGGCTCCATCACGACTTACTACTGGAGTTGGATCCGACAGCCCCCAGGGAAGGGACTGGAG  90
V  92.2% (225/244)  IGHV4-59*01  49   ...................CT........T..........GT.G............C........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  V  N  R  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_5632   91   TGGATTGGGTATATCTATTACACTGGCAGTGTCAACCGCAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*01  139  ......................G...G..CAC....TA..............................A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  D  E  G  Q  G  A  V  D 
                    Query_5632   181  CAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTTGACGAGGGGCAGGGGGCGGTTGAC  270
V  92.2% (225/244)  IGHV4-59*01  229  ...............C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -----------------------------------------------------------------------------.....--------  22
J  92.9% (39/42)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5632   271  TCTTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  307
J  92.9% (39/42)    IGHJ4*02     12   .AC.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_307608

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD2-8*02                                                                                            14.1    9.8   
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GTGAGGATTTCTTTGATG	CTGGTGG	GTCCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGAGGATTTCTTTGATGCTGGTGGGTCCCACTACTACGGCTTGGACGTC	ARREDFFDAGGSHYYGLDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  N  F  A  A  F
                    Query_5633   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAACTTTGCCGCCTT  90
V  95.9% (278/290)  IGHV5-51*01  6    .............................................................................G....A..AG..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_5633   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCCGGTGACTCTGATACCAGATACAGCCC  180
V  95.9% (278/290)  IGHV5-51*01  96   ...............................................................T..........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  A  M  S  A  D  K  S  I  S  T  A  F  L  Q  W  S  S  L  R  A  S  D  P  A
                    Query_5633   181  GTCCTTCCAAGGCCATGTCGCCATGTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAGGGCCTCGGACCCCGC  270
V  95.9% (278/290)  IGHV5-51*01  186  ...............G...A....C............................A....................A..........A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  R  E  D  F  F  D  A  G  G  S  H  Y  Y  G  L  D  V  W  G  Q  G  T  A  V
                    Query_5633   271  CATGTATTACTGTGCGAGACGTGAGGATTTCTTTGATGCTGGTGGGTCCCACTACTACGGCTTGGACGTCTGGGGCCAAGGGACCGCGGT  360
V  95.9% (278/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-8*02   12   --------------------------------------.......---------------------------------------------  18
J  92.5% (49/53)    IGHJ6*02     10   --------------------------------------------------..........TA.......................A....  49

                                                   
                                        T  V  S  S 
                    Query_5633   361  CACCGTCTCTTCA  373
J  92.5% (49/53)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_182450

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_5634   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.8% (277/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_5634   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_5634   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5634   271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.8% (277/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_5634   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_155200

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            382     4e-108
IGHD1-26*01                                                                                           14.1    9.0   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCG	GTGGGAG	TCACCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATGCGGTGGGAGTCACCCCCTACTTTGACTAC	ARDAVGVTPYFDY	273	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	158	27	26	1	0	96.3
FR3-IMGT	159	272	114	103	11	0	90.4
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	280	262	18	0	93.6


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  L  V  S  R  N  G  A  A  W  N  W  
                    Query_5635   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACATGTGCCATCTCCGGGGACCTTGTCTCTAGGAACGGTGCTGCTTGGAATTGGA  90
V  93.6% (262/280)  IGHV6-1*01   26   .....................................C..................AG.........C...A.............C....  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  L  R  
                    Query_5635   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATATTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTCTGAGAG  180
V  93.6% (262/280)  IGHV6-1*01   116  ..............................................C....................................G...A.A  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      G  R  I  I  I  S  P  D  T  S  N  N  L  F  S  L  H  L  N  S  V  T  P  E  D  T  A  M  Y  Y  
                    Query_5635   181  GTCGAATAATCATCAGCCCAGACACTTCCAACAACCTCTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTATGTATTACT  270
V  93.6% (262/280)  IGHV6-1*01   206  .........C.....A.........A.....G....AG...........G..............................G.........  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><--------------CDR3-IMGT-------------->                                  
                                      C  A  R  D  A  V  G  V  T  P  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_5635   271  GTGCAAGAGATGCGGTGGGAGTCACCCCCTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  345
V  93.6% (262/280)  IGHV6-1*01   296  ..........-----------------------------------------------------------------  305
                                      C  A  R                                                                    
D  100.0% (7/7)     IGHD1-26*01  7    --------------.......------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ----------------------------.........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_155201

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           279     3e-77
IGHD3-16*01                                                                                           18.0    0.60 
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACAACG	TATGCTTAT	GTCAGTGCTTGGGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAACGTATGCTTATGTCAGTGCTTGGGGATGATGCTTTTGATGTC	ARRQRMLMSVLGDDAFDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	214	36	0	85.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  V  T  T  T  R  Y  S  W  C  W  I  R  Q  P  P  G  K  G 
                    Query_5636   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCGTCACCACTACTAGATACTCCTGGTGTTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  85.6% (214/250)  IGHV4-39*01  49   ...............................G....A...G..G..G...T....A....G.C..........................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Q  M  F  Y  G  G  S  T  Y  Q  N  P  S  L  N  S  R  V  T  V  S  V  D  P  S 
                    Query_5636   91   CTGGAATGGATTGGGCAGATGTTCTATGGTGGGAGCACGTACCAGAACCCGTCGCTGAATAGTCGAGTCACCGTGTCCGTTGACCCGTCC  180
V  85.6% (214/250)  IGHV4-39*01  139  .....G.........AGT..C.AT...A..........C...T.C........C..C..G............A.A.....A...A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  S  Q  F  F  L  N  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  R  Q  R  M  L  M  S 
                    Query_5636   181  AAGAGTCAGTTCTTCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCTGTATATTATTGTGCGAGACGACAACGTATGCTTATGTCA  270
V  85.6% (214/250)  IGHV4-39*01  229  ....AC.......C......G....G...................A.......G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  26   -----------------------------------------------------------------------------.........----  34

                                      -IMGT--------------------->                                  
                                       V  L  G  D  D  A  F  D  V  W  G  Q  G  T  G  V  T  V  S  S  
                    Query_5636   271  GTGCTTGGGGATGATGCTTTTGATGTCTGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  331
J  96.0% (48/50)    IGHJ3*01     1    -----------...............................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_155205

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            394     6e-112
IGHD3-16*01                                                                                           12.2    34    
IGHJ3*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GCTTCC	TGGGGG	CCATGAGA	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATC	ARGFLGAMRDGLDI	269	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	154	27	27	0	0	100
FR3-IMGT	155	268	114	109	5	0	95.6
CDR3-IMGT (germline)	269	275	7	7	0	0	100
Total	N/A	N/A	274	263	11	0	96


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  D  T  W  N  W  I  R 
                    Query_5637   2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGATACTTGGAACTGGATCAGG  91
V  96.0% (263/274)  IGHV6-1*01   31   ........G...T.G.......................................................C.G.................  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 
                    Query_5637   92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGGAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGA  181
V  96.0% (263/274)  IGHV6-1*01   121  ................................A.........................................................  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  I  N  P  D  S  S  K  N  Q  F  S  L  Q  L  N  S  V  T  F  E  D  T  A  V  Y  F  C  A 
                    Query_5637   182  ATAACCATTAACCCAGACTCATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTTTCGAGGACACGGCTGTGTATTTCTGTGCA  271
V  96.0% (263/274)  IGHV6-1*01   211  ........C.........A.........................................CC....................A.......  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------------CDR3-IMGT--------------->                                  
                                       R  G  F  L  G  A  M  R  D  G  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5637   272  AGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  344
V  96.0% (263/274)  IGHV6-1*01   301  ....---------------------------------------------------------------------  304
                                       R                                                                       
D  100.0% (6/6)     IGHD3-16*01  17   ----------......---------------------------------------------------------  22
J  95.9% (47/49)    IGHJ3*02     2    ------------------------....C...T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_155207

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           290     2e-80
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTCTTG	ATTACTAT	CCTTCG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTCTTGATTACTATCCTTCGAACTGGTTCGACCGC	ARDSLDYYPSNWFDR	252	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	137	33	17	7	9	51.5
FR3-IMGT	138	251	114	104	10	0	91.2
CDR3-IMGT (germline)	252	259	8	7	1	0	87.5
Total	N/A	N/A	259	224	26	9	86.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  I  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5638   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCATCTATGGCATGAACTGGGTCCGCCAGGCTCCTGGGAAGGGACTGG  90
V  86.5% (224/259)  IGHV3-23*01  47   ........................................T....G.....C.....G..................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----------CDR2-IMGT-----------><------------------------------------------
                                      E  W  V  S  S  M  S  G  D  D  D  D  E  D  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  
                    Query_5638   91   AGTGGGTCTCATCCATGAGTGGTGATGATGATGATGAAGATAATACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAG  180
V  86.5% (224/259)  IGHV3-23*01  137  ...........G.T..T......AG..G..G.---------.GC.............................G................  217
                                      E  W  V  S  A  I  S  G  S  G  G           S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  

                                      ----------FR3-IMGT----------------------------------------------------><-----------------C
                                      D  N  S  N  N  I  L  Y  L  Q  M  N  R  L  R  A  D  D  T  A  V  Y  F  C  A  R  D  S  L  D  
                    Query_5638   181  ACAATTCCAATAATATCCTCTATCTACAAATGAACCGCCTGAGAGCCGACGACACGGCCGTATATTTCTGTGCGAGAGATTCTCTTGATT  270
V  86.5% (224/259)  IGHV3-23*01  218  ..........G..C.CG..G.....G.........A.............G................A........A...-----------  296
                                      D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K              
D  100.0% (8/8)     IGHD3-10*01  3    ---------------------------------------------------------------------------------------...  5

                                      DR3-IMGT----------------->                                  
                                      Y  Y  P  S  N  W  F  D  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5638   271  ACTATCCTTCGAACTGGTTCGACCGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (8/8)     IGHD3-10*01  6    .....-------------------------------------------------------  10
J  98.0% (48/49)    IGHJ5*02     3    -----------.............C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_155208

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            357     1e-100
IGHD2-2*01                                                                                            33.4    1e-05 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CT	TATTGTAGTAGTAGCATCTGCTA	CCA	TGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTTATTGTAGTAGTAGCATCTGCTACCATGACCAC	ATYCSSSICYHDH	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	237	9	0	96.3


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  V  T  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5639  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAGTCACCTTTAGTACCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.3% (237/246)  IGHV3-7*01  47   ................................T............G............................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  H  D  G  S  E  K  Y  Y  A  D  S  V  K  G  R  F  A  I  S  R  D  N  A  
                    Query_5639  91   AGTGGGTGGCCAACATAAAGCACGATGGAAGTGAGAAATACTATGCGGACTCTGTGAAGGGCCGATTCGCCATCTCCAGAGACAACGCCA  180
V  96.3% (237/246)  IGHV3-7*01  137  ......................A......................T......................A.....................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                     K  N  S  L  F  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  Y  C  S  S  S  I  C  
                    Query_5639  181  AGAACTCACTGTTTCTGCAAATGAGTAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGACTTATTGTAGTAGTAGCATCTGCT  270
V  96.3% (237/246)  IGHV3-7*01  227  ............A...........AC..........................G.............------------------------  292
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  91.3% (21/23)    IGHD2-2*01  5    --------------------------------------------------------------------.............C..G.....  26

                                     ---------->                                  
                                     Y  H  D  H  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_5639  271  ACCATGACCACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  315
D  91.3% (21/23)    IGHD2-2*01  27   .--------------------------------------------  27
J  95.1% (39/41)    IGHJ4*02    8    ----....T...............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_155209

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           321     7e-90
IGHD4-17*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCGGGGAGGGATT	CTACGGTGACT	CGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCGGGGAGGGATTCTACGGTGACTCGGTTGACTAC	AKVGEGFYGDSVDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  F  S  D  Y  D  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5640   1    GGTCCCTGAGACTCTCCTGTACAGCCTCAGGATTCATCTTTAGCGATTATGACCTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.2% (227/249)  IGHV3-23*01  47   ....................G.......T.......C.......AGC....C.A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  T  D  V  G  D  R  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  H  T  S  
                    Query_5640   91   AGTGGGTCTCAACTATTACTGATGTTGGTGATAGGACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGACACACTTCCA  180
V  91.2% (227/249)  IGHV3-23*01  137  ...........G......G..G.AG.....G...C.............................................G...A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  N  T  L  Y  L  Q  M  N  S  L  K  A  E  D  T  A  V  Y  Y  C  A  K  V  G  E  G  F  Y  G  
                    Query_5640   181  GGAACACACTGTATCTGCAAATGAACAGCCTGAAAGCCGAGGACACGGCCGTATATTATTGTGCGAAAGTCGGGGAGGGATTCTACGGTG  270
V  91.2% (227/249)  IGHV3-23*01  227  A......G.........................G........................C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD4-17*01  4    ----------------------------------------------------------------------------------........  11

                                      ------------->                                  
                                      D  S  V  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_5640   271  ACTCGGTTGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  318
D  100.0% (11/11)   IGHD4-17*01  12   ...---------------------------------------------  14
J  97.6% (41/42)    IGHJ4*02     7    ------..............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_304597

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         329     3e-92
IGHD2-2*02                                                                                            35.3    4e-06
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	GGATATTGTAGTGGTATCAGGTGCTTTACC	GGGGTAG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGGATATTGTAGTGGTATCAGGTGCTTTACCGGGGTAGGGTTCGACCCC	AREGYCSGIRCFTGVGFDP	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	56	30	25	2	3	83.3
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	21	0	0	100
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	15	3	92.8


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  S  V  S  G  D  S  I  S  S  G     Y  S  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_5641     4    CCCTGAGACTCTCCTGTTCTGTCTCTGGTGACTCCATCAGCAGTGGG---TACTCCTGGAGCTGGATCCGGCAGCCACCGGGGAAGGGCC  90
V  92.8% (232/250)  IGHV4-30-2*01  50   .....TCC...A....CG............G...............TGGT.............................A..........  139
                                           L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  R  S  
                    Query_5641     91   TGGAGTGGATTGGGTACATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCATTAGACAGGTCCA  180
V  92.8% (232/250)  IGHV4-30-2*01  140  .........................................................................A...G............  229
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                        T  N  Q  V  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  Y  C  S  G  I  
                    Query_5641     181  CGAACCAGGTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTACTGTGCCAGAGAGGGATATTGTAGTGGTATCA  270
V  92.8% (232/250)  IGHV4-30-2*01  230  A.......T................C.............................T..............--------------------  299
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (26/30)    IGHD2-2*02     2    -----------------------------------------------------------------------............A...C..  20

                                        -IMGT----------------------->                                  
                                        R  C  F  T  G  V  G  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5641     271  GGTGCTTTACCGGGGTAGGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  86.7% (26/30)    IGHD2-2*02     21   .C....A....----------------------------------------------------  31
J  100.0% (45/45)   IGHJ5*02       7    ------------------.............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_213741

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD6-13*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CACG	AGCAGCTGG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACACGAGCAGCTGGATTGACTAC	ARDTSSWIDY	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  V  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_5642   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGTCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.9% (229/244)  IGHV4-59*01  50   .....TCC...A....C.............G...........G...............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  F  Y  T  G  S  T  N  Y  N  P  P  L  K  S  Q  F  T  I  S  V  D  T  S  K  N  
                    Query_5642   94   GGATTGGGTATATCTTTTACACTGGGAGCACCAACTACAACCCCCCCCTCAAGAGTCAATTCACCATATCAGTAGACACGTCGAAGAACC  183
V  93.9% (229/244)  IGHV4-59*01  140  ...............A.....G......................T............G.G......................C.......  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------CDR3-IMGT--------->    
                                      Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  S  S  W  I  D  Y  W  
                    Query_5642   184  AGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACACGAGCAGCTGGATTGACTACTGGG  273
V  93.9% (229/244)  IGHV4-59*01  230  ..............C...G.............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (9/9)     IGHD6-13*01  10   --------------------------------------------------------------------.........-------------  18
J  97.6% (41/42)    IGHJ4*02     7    ------------------------------------------------------------------------------............  18

                                                                    
                                      G  Q  G  T  L  V  P  V  S  S  
                    Query_5642   274  GCCAGGGAACCCTGGTCCCCGTCTCCTCAG  303
J  97.6% (41/42)    IGHJ4*02     19   .................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_5480

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD3-3*01                                                                                            23.8    0.011
IGHJ5*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCTGTCCCGC	ATTATGGTTTTTGGAATGATTATT	CCAAAATCTAACTCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTGTCCCGCATTATGGTTTTTGGAATGATTATTCCAAAATCTAACTCTTTCGACACC	ARGLSRIMVFGMIIPKSNSFDT	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  Y  G  G  S  F  N  G  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5643   1    ACCCTGTCCCTCACCTGCTCTGTCTATGGTGGGTCGTTCAATGGTCACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  92.2% (226/245)  IGHV4-34*01  49   ..................G................C....G....T............................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  D  T  N  Y  N  S  S  L  K  S  R  V  T  L  S  V  D  T  S  R  N 
                    Query_5643   91   TGGATTGGGGAAATTTCTCATAGTGGAGACACCAACTACAACTCGTCCCTCAAGAGTCGAGTCACCTTGTCAGTTGACACGTCCAGGAAC  180
V  92.2% (226/245)  IGHV4-34*01  139  ..............CAA..........AG.............C.......................A.A.....A..........A....  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  T  S  L  T  V  A  D  T  A  V  Y  Y  C  A  R  G  L  S  R  I  M  V  F  G 
                    Query_5643   181  CAGTTCTCCCTGAAGCTGACCTCCCTGACCGTCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCCTGTCCCGCATTATGGTTTTTGGA  270
V  92.2% (226/245)  IGHV4-34*01  229  ...................G...TG......C...............G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  83.3% (20/24)    IGHD3-3*01   3    ---------------------------------------------------------------------------....C.A........  17

                                      -IMGT--------------------------->                                  
                                       M  I  I  P  K  S  N  S  F  D  T  W  G  P  G  T  L  V  T  V  S  S  
                    Query_5643   271  ATGATTATTCCAAAATCTAACTCTTTCGACACCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  337
D  83.3% (20/24)    IGHD3-3*01   18   G..G.....----------------------------------------------------------  26
J  95.3% (41/43)    IGHJ5*02     9    ------------------------......C.........A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_276497

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	221	24	6	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_5644   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.0% (221/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_5644   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.0% (221/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  S  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_5644   181  AAGAGCCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.0% (221/251)  IGHV4-34*01  223  ....A...............GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_5644   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_276496

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            327     8e-92
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TGGCCGGCG	GTGGCTGG	CT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGCCGGCGGTGGCTGGCTCTTTGACTAT	VAGGGWLFDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  Q  F  T  S  S  T  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5645   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTCAATTCACCTCTAGTACCTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.0% (226/243)  IGHV3-7*03   47   .....................C.......GG........T.....G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  Q  D  G  S  E  K  I  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5645   91   AGTGGGTGGCCAACATAAACCAAGACGGAAGTGAGAAAATCTACGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.0% (226/243)  IGHV3-7*03   137  ...................G.....T............TA...T..............................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      R  K  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  A  G  G  G  W  L  F  D  
                    Query_5645   181  GGAAGTCACTGTATTTACAAATGAACAGCCTGAGAGCCGACGACACGGCCGTGTATTATTGTGTGGCCGGCGGTGGCTGGCTCTTTGACT  270
V  93.0% (226/243)  IGHV3-7*03   227  A...C.........C.G.......................G.................C....---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (8/8)     IGHD6-19*01  11   ------------------------------------------------------------------------........----------  18
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------........  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5645   271  ATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.7% (43/44)    IGHJ4*02     13   .C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_276495

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           410     1e-116
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ2*01                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGA	TACTATGACAGTAGTGGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTC	ARDGYYDSSGYYYDL	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  S  Y  S  F  S  S  H 
                    Query_5646   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTAGTTACAGTTTTAGCAGCCAC  91
V  95.2% (276/290)  IGHV1-18*04  7    .....................................................................G......CC....C....T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  D  Y  A  R 
                    Query_5646   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGGTGGATCAGCGGTTACAATGGTAACACAGACTATGCACGG  181
V  95.2% (276/290)  IGHV1-18*04  97   ................................A.................A..........C................A.........A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  A  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  T  S  D  D  T  A 
                    Query_5646   182  AAGTTCCAGGGCAGAGTCACCATGACCGCAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGACATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*04  187  ...C.......................A.............................................G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  D  G  Y  Y  D  S  S  G  Y  Y  Y  D  L  W  G  R  G  T  L  V  T  V  S  S 
                    Query_5646   272  GTGTATTACTGTGCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTCTGGGGCCGGGGAACCCTGGTCACTGTCTCCTCA  361
V  95.2% (276/290)  IGHV1-18*04  277  ...............A....----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  95.2% (20/21)    IGHD3-22*01  5    ------------------------........T............---------------------------------------------  25
J  91.3% (42/46)    IGHJ2*01     8    ---------------------------------------------....T...T...........T..C.....................  52

                                       
                                       
                    Query_5646   362  G  362
J  91.3% (42/46)    IGHJ2*01     53   .  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_276494

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           310     1e-86
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCACCGGTGG	AGCAATGGCTGG	GGAACATACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCACCGGTGGAGCAATGGCTGGGGAACATACTATAATTACGGTATGGACGCC	ARGHRWSNGWGTYYNYGMDA	263	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	38	7	0	84.4
CDR1-IMGT	47	76	30	21	3	6	70
FR2-IMGT	77	127	51	45	6	0	88.2
CDR2-IMGT	128	148	21	17	4	0	81
FR3-IMGT	149	262	114	108	6	0	94.7
CDR3-IMGT (germline)	263	267	5	5	0	0	100
Total	N/A	N/A	266	234	26	6	88


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  E  T  L  T  L  T  C  A  V  Y  G  G  P  F  T  D  S  G  Y  Y  W  N  W  C  R 
                    Query_5647   2    CTGGTGAAACCCACGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGCCCTTCACTGACAGTGGTTATTATTGGAACTGGTGCCGC  91
V  88.0% (234/266)  IGHV4-34*12  31   ...T....G..TT...........T................C..T......T......------.......C..C....G....AT....  114
                                       L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R 

                                      ------FR2-IMGT---------------------><-----CDR2-IMGT-----><--------------------------------
                                       Q  P  P  G  K  G  L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T 
                    Query_5647   92   CAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAACCCGTCCCTCCAGAGTCGAGTCACC  181
V  88.0% (234/266)  IGHV4-34*12  115  .....C...........G.....G.............T.......AG.....G......................A..............  204
                                       Q  P  P  G  K  G  L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T 

                                      --------------------FR3-IMGT----------------------------------------------------><--------
                                       I  S  I  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G 
                    Query_5647   182  ATATCAATAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGGGGC  271
V  88.0% (234/266)  IGHV4-34*12  205  ......G...............................GC............C........................C........----  290
                                       I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A       

                                      -----------------CDR3-IMGT------------------------>                                 
                                       H  R  W  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_5647   272  CACCGGTGGAGCAATGGCTGGGGAACATACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  355
D  91.7% (11/12)    IGHD6-19*01  7    ---------....G.......---------------------------------------------------------------  18
J  93.8% (45/48)    IGHJ6*02     15   ------------------------------------.............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_276493

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           372     2e-105
IGHD2-15*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAA	ATATTGTTGTAATGGAAGCTGC	CCCCCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAAATATTGTTGTAATGGAAGCTGCCCCCCCTCCCTAC	ARGNIVVMEAAPPPY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	264	26	0	91


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  N  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_5648   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAATATTTCCTGCAAGGCGTCTGGATACACCTTCACCAGTTA  90
V  91.0% (264/290)  IGHV1-46*01  6    ..................G................................GG.............A....................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  I  I  N  P  S  R  D  S  A  T  Y  A  Q
                    Query_5648   91   TTATGTCCACTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGCAATAATCAACCCGAGTCGTGACAGCGCAACCTACGCGCA  180
V  91.0% (264/290)  IGHV1-46*01  96   C...A.G..........................A................G............T...G...GT...A...G......A..  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  L  S  M  T  R  D  T  S  T  N  T  V  H  M  E  L  N  S  L  R  P  E  D  T  A
                    Query_5648   181  GAAGTTCCAGGGCAGACTCAGCATGACCAGGGACACGTCCACTAACACAGTCCACATGGAGCTGAACAGCCTGAGACCTGAGGACACGGC  270
V  91.0% (264/290)  IGHV1-46*01  186  ................G...C.....................G.G.......T............G..........T.............  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  G  N  I  V  V  M  E  A  A  P  P  P  Y  W  G  L  G  T  L  V  T  V  S  S
                    Query_5648   271  CGTCTATTATTGTGCGAGAGGAAATATTGTTGTAATGGAAGCTGCCCCCCCTCCCTACTGGGGCCTGGGAACACTGGTCACCGTCTCCTC  360
V  91.0% (264/290)  IGHV1-46*01  276  ...G.....C..........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  81.8% (18/22)    IGHD2-15*01  4    -----------------------.......A..GG...T......---------------------------------------------  25
J  94.7% (36/38)    IGHJ4*02     11   ------------------------------------------------------...........A......C.................  46

                                        
                                        
                    Query_5648   361  AG  362
J  94.7% (36/38)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_276492

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD1-26*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCGATAAAC	TGGGAGCTAC	CGAC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCGATAAACTGGGAGCTACCGACATGCTTTTGATATC	ARFR*TGSYRHAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	233	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5649   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTATTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  95.9% (233/243)  IGHV4-59*01  49   ...........................................G...C.A.......................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       Y  I  G  Y  I  S  Y  S  G  S  T  D  Y  N  P  S  L  K  S  G  V  T  I  S  L  D  T  S  K  N 
                    Query_5649   91   TATATTGGGTATATCTCTTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTGGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  95.9% (233/243)  IGHV4-59*01  139  .GG.............A................A.......................C..............G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  R  *  T  G  S  Y  R  H 
                    Query_5649   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATTCCGATAAACTGGGAGCTACCGACAT  270
V  95.9% (233/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD1-26*01  8    --------------------------------------------------------------------------..........------  17
J  97.8% (44/45)    IGHJ3*02     3    ----------------------------------------------------------------------------------------..  4

                                      ----------->                               
                                       A  F  D  I  W  S  Q  G  T  M  V  T  V  S  
                    Query_5649   271  GCTTTTGATATCTGGAGCCAAGGGACAATGGTCACCGTCTCTT  313
J  97.8% (44/45)    IGHJ3*02     5    ...............G...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_276491

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     9e-99
IGHD5-18*01                                                                                           18.0    0.63 
IGHJ5*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	261	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	18	6	0	75
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	105	9	0	92.1
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	246	22	0	91.8


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  
                    Query_5650   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGC  90
V  91.8% (246/268)  IGHV4-59*01  26   ................T.....................................G........G.AGT.A....................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  S  P  G  K  G  L  E  W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  
                    Query_5650   91   AGTCCCCAGGGAAGGGACTGGAGTGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCA  180
V  91.8% (246/268)  IGHV4-59*01  116  ..C............................G......T..........G.GC.............................A.T.A...  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  S  Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  
                    Query_5650   181  TTTCAGTAGACACGTCCAAGAGCCAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATC  270
V  91.8% (246/268)  IGHV4-59*01  206  .A...................A...............G.....C..................A.......G.................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -------------CDR3-IMGT--------------------->                                  
                                      P  T  G  S  G  Y  N  F  G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5650   271  CTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  348
D  83.3% (15/18)    IGHD5-18*01  1    ---------.......C.G..A.....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    -----------------------------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_276490

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	273	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_5651   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  94.8% (273/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_5651   91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  94.8% (273/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  T  S  D  T  A
                    Query_5651   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGACCTCGGACACCGC  270
V  94.8% (273/288)  IGHV5-51*01  186  ...............G.........................T.........................A........G.............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5651   271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  94.8% (273/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_205115

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           347     7e-98
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGTCCCTC	ACGGTGAC	CTAGATT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGACGTCCCTCACGGTGACCTAGATTCC	ARDVPHGDLDS	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  S  T  F  S  S  F  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5652   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATCCACCTTCAGTAGCTTCTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-74*01  47   .................................T..............A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  I  T  V  D  G  S  G  T  V  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5652   91   AGTGGGTCTCACGCATTACTGTTGATGGCAGTGGCACAGTCTATGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-74*01  137  T............T....A.AG......G...A.....AG...C..............................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  V  P  H  G  D  L  
                    Query_5652   181  AGAACACGTTGTATCTGCAAATGAACAGTCTGAGAGCCGACGACACGGCTGTGTATTACTGTGCAAGAGACGTCCCTCACGGTGACCTAG  270
V  94.4% (236/250)  IGHV3-74*01  227  ........C...............................G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD4-17*01  6    ------------------------------------------------------------------------------........----  13

                                      ---->                                  
                                      D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5652   271  ATTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (36/36)   IGHJ5*02     16   ---....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_205116

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     5e-95
IGHD5-18*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AAAG	GTGGAGACAGCTTTGG	GGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAAAGAAAAGGTGGAGACAGCTTTGGGGTACTACCTTGACTCT	TKEKVETALGYYLDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5653   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-23*01  47   ...........................................C.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  V  S  H  S  G  G  R  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5653   91   AGTGGGTCTCTACTGTAAGTCATAGTGGTGGTAGGACATACTTCGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCCGAGACAATTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  ..........AG..A.T...GG............C.......A..................................A............  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  V  N  N  L  R  P  E  D  S  A  V  Y  Y  C  T  K  E  K  V  E  T  A  L  
                    Query_5653   181  AGAACACGCTGTATCTGCAAGTCAACAACCTGAGACCCGAGGACTCGGCCGTATATTACTGTACGAAAGAAAAGGTGGAGACAGCTTTGG  270
V  93.2% (233/250)  IGHV3-23*01  227  ....................A.G....G.......G........A.................G.......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  87.5% (14/16)    IGHD5-18*01  1    --------------------------------------------------------------------------.....T......A...  16

                                      ---------------->                                  
                                      G  Y  Y  L  D  S  W  G  Q  G  T  L  V  A  V  S  T  
                    Query_5653   271  GGTACTACCTTGACTCTTGGGGCCAGGGAACCCTGGTCGCCGTCTCCACAG  321
J  89.6% (43/48)    IGHJ4*02     1    ---.....T......AC.....................A........T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_205117

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           414     6e-118
IGHD3-16*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATTGCGGGGC	TTTGGGGGAGTTATCCTTA	AAGGAATG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATTGCGGGGCTTTGGGGGAGTTATCCTTAAAGGAATGGACTAC	ARGLRGFGGVILKGMDY	291	341	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	280	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  T  A  S  G  G  S  F  S 
                    Query_5654   3    CAGATGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCACGGCTTCTGGAGGCAGCTTCAGC  92
V  94.9% (280/295)  IGHV1-69*06  1    ...G...............................................................A..............C.......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  V  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  S  P  I  F  G  T  T  N  Y 
                    Query_5654   93   GACTATGTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCAGCCCTATCTTTGGGACAACAAACTAC  182
V  94.9% (280/295)  IGHV1-69*06  91   AG.....C........................................................T............T...G........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  N  T  A  Y  M  E  L  S  S  L  T  S  D  D 
                    Query_5654   183  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACAAATACAGCCTACATGGAGTTGAGCAGCCTGACATCTGATGAC  272
V  94.9% (280/295)  IGHV1-69*06  181  ...............................................G.GC...............C............G......G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------------CDR3-IMGT-------------------->                     
                                       T  A  V  Y  Y  C  A  R  G  L  R  G  F  G  G  V  I  L  K  G  M  D  Y  W  G  Q  G  T  L  V 
                    Query_5654   273  ACGGCCGTGTATTACTGTGCGAGAGGATTGCGGGGCTTTGGGGGAGTTATCCTTAAAGGAATGGACTACTGGGGCCAGGGAACCCTGGTC  362
V  94.9% (280/295)  IGHV1-69*06  271  .........................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.7% (18/19)    IGHD3-16*01  15   ------------------------------------..............G....-----------------------------------  33
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------...........................  35

                                                   
                                       T  A  S  S  
                    Query_5654   363  ACCGCCTCCTCAG  375
J  97.5% (39/40)    IGHJ4*02     36   ....T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_205110

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATG	GTATTATTCTGATAACAGTGGTTATT	T	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATGGTATTATTCTGATAACAGTGGTTATTTCTTTGACTCC	AREWYYSDNSGYFFDS	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_5655   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGCCAGTCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...........................................G.....................G...C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  V  Y  Y  T  G  F  T  D  Y  N  P  S  L  K  S  R  I  T  I  S  L  D  T  S  K  N 
                    Query_5655   91   TGGCTTGGGTTTGTCTATTACACTGGATTCACCGACTACAACCCCTCCCTCAAGAGTCGAATCACCATATCACTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ...A......A.A.........G...GAG....A..........................G...........G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  W  Y  Y  S  D  N  S  G 
                    Query_5655   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGAATGGTATTATTCTGATAACAGTGGT  270
V  93.5% (229/245)  IGHV4-59*01  229  .............A.................................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (22/26)    IGHD3-22*01  1    --------------------------------------------------------------------......C.A.....GT......  22

                                      -------------->                                  
                                       Y  F  F  D  S  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_5655   271  TATTTCTTTGACTCCTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  319
D  84.6% (22/26)    IGHD3-22*01  23   ....---------------------------------------------  26
J  95.5% (42/44)    IGHJ4*02     5    -----........A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_205112

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            410     1e-116
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGTGAGGAACCAGCTCGTATCCGACTTC	ARAVRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  S  Y
                    Query_5656  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCAGCAGTTA  90
V  95.2% (276/290)  IGHV1-8*01  6    ...................................................................................C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  R  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  E
                    Query_5656  91   TGATATCACCTGGGTGCGACGGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCAGA  180
V  95.2% (276/290)  IGHV1-8*01  96   ........A...........A.............................................C.....................C.  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  G  D  T  S  I  T  T  A  Y  M  E  M  S  S  L  N  S  E  D  T  A
                    Query_5656  181  GAAGTTCCAGGGCAGAGTCACCATGACCGGGGACACTTCCATAACCACAGCCTACATGGAGATGAGCAGCCTAAACTCTGAAGACACGGC  270
V  95.2% (276/290)  IGHV1-8*01  186  ............................A..A....C.......G................C..........G.GA.....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  V  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_5656  271  CGTGTATTACTGTGCGAGAGCGGTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  353
V  95.2% (276/290)  IGHV1-8*01  276  ....................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  95.0% (38/40)    IGHJ4*02    9    -------------------------------------------....A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_276498

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         322     2e-90
IGHD2-2*01                                                                                            35.3    4e-06
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGGGGAG	TATTGTAGTAGTACCAACTGC	ATG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGGGGAGTATTGTAGTAGTACCAACTGCATGTACGGTCTGGACGTC	ARGGEYCSSTNCMYGLDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  D  I  Y  S  W  N  W  I  R  Q  P  P  G  M  G 
                    Query_5657     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCTCCAGTGATATTTACTCCTGGAACTGGATCCGGCAGCCACCAGGGATGGGC  90
V  91.5% (227/248)  IGHV4-30-2*01  49   .......................................AG.....G.GG...........G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  V  G  H  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  R  S 
                    Query_5657     91   CTGGAGTGGGTTGGCCACATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCCAGAGTCGAGTCACCATCTCAGTTGACAGGTCC  180
V  91.5% (227/248)  IGHV4-30-2*01  139  .........A....GT..................G......................A................A.....A.........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  K  H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  E  Y  C  S  S 
                    Query_5657     181  AAGAAACACTTCTCGTTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGGGGGGGGGAGTATTGTAGTAGT  270
V  91.5% (227/248)  IGHV4-30-2*01  229  .....C..G.....CC...A.....G...........................G..............----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  95.2% (20/21)    IGHD2-2*01     5    ------------------------------------------------------------------------------............  16

                                        -IMGT--------------------->                                 
                                         T  N  C  M  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5657     271  ACCAACTGCATGTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
D  95.2% (20/21)    IGHD2-2*01     17   ....G....---------------------------------------------------  25
J  97.9% (47/48)    IGHJ6*02       15   ------------......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_246058

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           389     2e-110
IGHD3-16*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGGGGCTG	GGGGGAG	CCCAGGT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGGGGCTGGGGGGAGCCCAGGTCTACGCTATGGACGTC	AGGLGGAQVYAMDV	290	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	69	2	0	97.2
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	292	3	3	0	0	100
Total	N/A	N/A	287	268	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  R  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  
                    Query_5658   6    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGTT  95
V  93.4% (268/287)  IGHV1-69*01  5    ...................G..........A.........................................................C.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  P  I  S  W  V  R  L  A  P  G  Q  G  L  E  W  M  G  G  I  I  L  I  F  R  T  A  N  Y  P  
                    Query_5658   96   ATCCTATCAGTTGGGTGCGACTGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGTATCATCCTTATCTTTCGAACAGCAAACTACCCAC  185
V  93.4% (268/287)  IGHV1-69*01  95   ..G.......C..........A.................................G.......C.......G.T............G...  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  R  V  T  I  S  A  D  V  S  T  N  T  A  Y  M  E  L  R  S  L  T  S  E  D  T  
                    Query_5658   186  AGAAGTTCCAGGGCAGAGTCACGATTTCCGCGGACGTATCCACGAACACAGCCTACATGGAACTGAGGAGTCTGACATCTGAGGACACGG  275
V  93.4% (268/287)  IGHV1-69*01  185  ..........................A.........A........G...............G.....C..C....G..............  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                 
                                      A  V  Y  Y  C  A  G  G  L  G  G  A  Q  V  Y  A  M  D  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_5658   276  CCGTCTATTACTGTGCGGGGGGGCTGGGGGGAGCCCAGGTCTACGCTATGGACGTCTGGGGCCAGGGGACCCCGGTCACTGTCTCCTCA  364
V  93.4% (268/287)  IGHV1-69*01  275  ....G............------------------------------------------------------------------------  291
                                      A  V  Y  Y  C  A                                                                         
D  100.0% (7/7)     IGHD3-16*01  18   --------------------------.......--------------------------------------------------------  24
J  91.8% (45/49)    IGHJ6*02     14   ----------------------------------------.....G..................A......A.......C.........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_246059

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           388     5e-110
IGHD3-10*01                                                                                           12.2    35    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCCAGC	GGGAGT	GAAAAGTTAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGCAGATCCAGCGGGAGTGAAAAGTTAATTGACTCT	GRSSGSEKLIDS	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	105	9	0	92.1
CDR3-IMGT (germline)	289	294	6	4	2	0	66.7
Total	N/A	N/A	294	271	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  E  A  S  G  Y  T  F  S 
                    Query_5659   1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAAGTCTCCTGCGAGGCTTCTGGTTACACCTTTAGC  90
V  92.2% (271/294)  IGHV1-18*04  1    .....T..................................................G.........A.....................C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  E  I  S  W  V  R  Q  A  R  G  Q  G  L  E  W  M  G  C  I  S  G  Y  S  G  D  T  E  Y 
                    Query_5659   91   AACTACGAAATCAGCTGGGTGCGACAGGCCCGTGGACAAGGGCTTGAGTGGATGGGATGCATCAGCGGTTACAGTGGTGACACAGAGTAT  180
V  92.2% (271/294)  IGHV1-18*04  91   .G.....GT......................C...........................G.......C.....A....A.....A.C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Y  Q  F  R  G  R  V  T  M  T  T  D  T  S  A  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_5659   181  GCATACCAATTCCGGGGCAGAGTCACCATGACCACAGACACATCCGCGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  270
V  92.2% (271/294)  IGHV1-18*04  181  ...C.GA.GC...A...............................A............................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  V  Y  Y  C  G  R  S  S  G  S  E  K  L  I  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5659   271  ACGGCCGTGTATTACTGTGGCAGATCCAGCGGGAGTGAAAAGTTAATTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  92.2% (271/294)  IGHV1-18*04  271  ...................CG...----------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD3-10*01  17   ------------------------------......----------------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    ----------------------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_246050

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           380     1e-107
IGHD3-16*01                                                                                           12.2    36    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	ACCCTTCTCCCCGGGTCCCCC	TGGGGG	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAACCCTTCTCCCCGGGTCCCCCTGGGGGCCCTTTGACTCT	AGTLLPGSPWGPFDS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  A  V  R  R  P  G  E  S  L  T  I  S  C  Q  G  S  G  Y  R  V  P  T  H
                    Query_5660   1    GCAGCTGGTGCAGTCTGGAGCAGCGGTGAGAAGGCCCGGGGAGTCTCTGACGATTTCCTGTCAGGGTTCTGGATACAGAGTTCCCACCCA  90
V  92.0% (266/289)  IGHV5-51*01  6    .......................A.....A..A.................A...C......A................CT..A...G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_5660   91   TTGGATCGGGTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  92.0% (266/289)  IGHV5-51*01  96   C........C......................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  V  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_5660   181  GTCCTTCCAAGGCCAGGTCACCATCTCTGTCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACACCGC  270
V  92.0% (266/289)  IGHV5-51*01  186  ...........................A.C..........A...G........................C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        T  Y  F  C  A  G  T  L  L  P  G  S  P  W  G  P  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5660   271  CACATATTTCTGTGCGGGAACCCTTCTCCCCGGGTCCCCCTGGGGGCCCTTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  92.0% (266/289)  IGHV5-51*01  276  ..TG....A.......A..-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------......--------------------------------------------  22
J  95.5% (42/44)    IGHJ4*02     5    ------------------------------------------------........AC................................  46

                                        
                                        
                    Query_5660   361  AG  362
J  95.5% (42/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_246051

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD2-2*01                                                                                            23.8    0.012 
IGHJ5*01                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATG	GGATATTGTAGCAGT	GTCATCTGTGAGGGACCT	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGATATTGTAGCAGTGTCATCTGTGAGGGACCTGACTCC	ARHMGYCSSVICEGPDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  T  F  G  T  Y
                    Query_5661   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTGGCACCTA  90
V  94.5% (275/291)  IGHV5-51*01  6    ....................................C........................A...............G....AC..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  K  Y  S  P
                    Query_5661   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGAGACGAAATACAGTCC  180
V  94.5% (275/291)  IGHV5-51*01  96   ........G..................................................................T..C.G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  P  D  T  A
                    Query_5661   181  GTCCTTCCGAGGCCAGGTCACCATATCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCCCGGACACCGC  270
V  94.5% (275/291)  IGHV5-51*01  186  ........A...............C....C...............C.................................T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  M  G  Y  C  S  S  V  I  C  E  G  P  D  S  W  G  H  G  T  L  V  T  V
                    Query_5661   271  CATGTATTACTGTGCGAGACATATGGGATATTGTAGCAGTGTCATCTGTGAGGGACCTGACTCCTGGGGCCACGGAACCCTGGTCACCGT  360
V  94.5% (275/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  93.3% (14/15)    IGHD2-2*01   2    -------------------------...........T...--------------------------------------------------  16
J  97.5% (39/40)    IGHJ5*01     12   ----------------------------------------------------------..............A.................  43

                                              
                                        S  S  
                    Query_5661   361  CTCCTCAG  368
J  97.5% (39/40)    IGHJ5*01     44   ........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_246054

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           363     1e-102
IGHD1-26*01                                                                                           18.0    0.59  
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGAG	GTGGGAGCT	TCAGTGGTGAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCGAGGTGGGAGCTTCAGTGGTGATTACGGTATGGACGTC	ARDRGGSFSGDYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5662   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-48*03  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  C  T  S  Q  S  G  F  T  R  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5662   91   AGTGGGTTTCATGTACTAGTCAAAGTGGTTTTACCAGATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (241/250)  IGHV3-48*03  137  ............AC.T....AGT......AG.....T.....................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  G  G  S  F  S  
                    Query_5662   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGACCGAGGTGGGAGCTTCAGTG  270
V  96.4% (241/250)  IGHV3-48*03  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD1-26*01  7    ---------------------------------------------------------------------------.........------  15

                                      T------------------>                                 
                                      G  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5662   271  GTGATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  100.0% (48/48)   IGHJ6*02     15   -----................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_246057

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           283     1e-78
IGHD3-16*02                                                                                           14.1    8.6  
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGACGCT	GGAGTAATCG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGACGCTGGAGTAATCGACTACTACGGTATGGACGTC	AREDAGVIDYYGMDV	250	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	135	27	18	3	6	66.7
FR3-IMGT	136	249	114	94	20	0	82.5
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	221	30	6	86


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  P  G  V  S  I  S  S  G  S  Y  Y  W  T  W  I  R  Q  R  P  G  K  G 
                    Query_5663   1    ACCCTGTCCCTCACCTGCACTGTCCCTGGTGTCTCCATCAGCAGTGGTTCTTACTACTGGACGTGGATCCGCCAGCGCCCAGGGAAGGGC  90
V  86.0% (221/257)  IGHV4-31*03  49   ........................T......G................GG...........GC.............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  N  N  R  G  S  P  D  F  N  P  S  L  M  G  R  T  V  I  S  L  D 
                    Query_5663   91   CTGGAGTGGATTGGGTACATCTATAACAATAATAGAGGGAGCCCCGACTTCAATCCGTCCCTCATGGGTCGGACTGTCATCTCTCTAGAC  180
V  86.0% (221/257)  IGHV4-31*03  139  ........................T..------..T......A..T...A...C..........A.A....AGT.AC...A..AG.....  222
                                       L  E  W  I  G  Y  I  Y  Y        S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-----------------CDR
                                       T  S  N  N  L  F  Y  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  E  D  A  G  V 
                    Query_5663   181  ACTTCTAATAACCTGTTCTACCTGAGGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGAGGACGCTGGAGTA  270
V  86.0% (221/257)  IGHV4-31*03  223  ..G.....G....A.....C.....A.....G................................A............-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  90.0% (9/10)     IGHD3-16*02  21   ------------------------------------------------------------------------------------.....T  26

                                      3-IMGT----------------->                                 
                                       I  D  Y  Y  G  M  D  V  W  G  Q  G  I  T  V  T  V  S  S 
                    Query_5663   271  ATCGACTACTACGGTATGGACGTCTGGGGCCAAGGGATCACGGTCACCGTCTCCTCA  327
D  90.0% (9/10)     IGHD3-16*02  27   ....-----------------------------------------------------  30
J  98.1% (52/53)    IGHJ6*02     10   ----.................................C...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_184453

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGGTACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGGTACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5664   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (239/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5664   91   TGGATTGGGTATATCTATTACAGTGGGAATACCAACTATAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  ............................GC........C...................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_5664   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGGTACAGCTATGGTTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.0% (19/20)    IGHD5-18*01  1    ----------------------------------------------------------------....A...............------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5664   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_184452

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5665   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_5665   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_5665   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_5665   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_184456

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           341     5e-96
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAG	GGGGGGGTT	GGCGGGAGCCTCTTAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGGGGGGGTTGGCGGGAGCCTCTTATTACTTTGACCAC	ARDRGGLAGASYYFDH	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5666   1    GGTCCCTGAGACTCTCCTGTGTAGCGTCTGGATTCACCTTCAGCAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-33*01  47   .....................C.....................T..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  L  I  W  Y  D  G  D  N  K  D  Y  R  D  T  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_5666   91   AGTGGTTGGCACTTATATGGTATGATGGAGATAATAAGGACTATAGAGACACCGTGCAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-33*01  137  .....G.....G.................AG......AT.....GC....T.....A.................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  M  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  G  G  L  A  G  
                    Query_5666   181  AGAACACGATGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTACTACTGTGCGAGAGATAGGGGGGGGTTGGCGGGAG  270
V  93.6% (234/250)  IGHV3-33*01  227  ........C.......G......................................T..............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD3-16*01  18   -------------------------------------------------------------------------.....A...--------  26

                                      T------------------>                                  
                                      A  S  Y  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5666   271  CCTCTTATTACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  324
J  95.7% (44/46)    IGHJ4*02     3    --------.........T...............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_184455

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           372     2e-105
IGHD2-21*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGG	TGTGGTGG	GTGCCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTGGTGGGTGCCCCCTTTGACTCC	ARGGVVGAPFDS	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	264	26	0	91


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  T  S  G  G  S  F  T  S  Y
                    Query_5667   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACTTCTGGAGGCAGTTTCACCAGCTA  90
V  91.0% (264/290)  IGHV1-69*06  6    ..................G.............................................G............CC....G......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  M  P  L  F  D  I  A  N  Y  G  Q
                    Query_5667   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGAATCATGCCTCTGTTTGACATAGCAAACTACGGACA  180
V  91.0% (264/290)  IGHV1-69*06  96   ......................................................G.....C...A.C....GT.C...........C...  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  K  F  T  G  T  A  C  M  E  L  N  S  L  R  S  G  D  T  A
                    Query_5667   181  GAAGTTCCAGGGCAGAGTCACCATTACCGCGGACAAGTTCACGGGGACAGCCTGCATGGAGTTGAATAGCCTGAGATCGGGGGACACGGC  270
V  91.0% (264/290)  IGHV1-69*06  186  .....................G..............A.C....A.C.......A.......C...GC...........T.A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  V  V  G  A  P  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5667   271  CATTTATTACTGTGCGAGAGGAGGTGTGGTGGGTGCCCCCTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  91.0% (264/290)  IGHV1-69*06  276  .G.G................---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD2-21*01  8    ------------------------........---------------------------------------------------  15
J  97.7% (43/44)    IGHJ4*02     5    ---------------------------------------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_184454

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*09                                                                                           353     1e-99
IGHJ5*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*09	N/A	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GGGTCTTCCCGGGCGGGCTCAGGGAAT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTCTTCCCGGGCGGGCTCAGGGAATCC	ARGVFPGGLRES	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	258	32	0	89


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  S  S  S  I  Y
                    Query_5668   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGGCAGCTCCAGCATCTA  90
V  89.0% (258/290)  IGHV1-69*09  6    ..................................................................T..........C..T.....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  T  W  F  R  Q  A  P  G  Q  G  L  E  W  M  G  N  V  V  P  L  F  S  I  P  T  Y  A  Q
                    Query_5668   91   TGTTATCACCTGGTTCCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGAACGTCGTCCCTTTGTTTAGTATACCAACCTACGCACA  180
V  89.0% (258/290)  IGHV1-69*09  96   ..C.....G....G.G...................................A.GGA..A.....A.CC..G.....G...A.........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  I  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  V  Q  G  R  I  T  I  T  A  D  T  S  T  S  T  A  Y  M  E  L  S  S  L  T  S  D  D  A  G
                    Query_5668   181  GAAGGTCCAAGGCAGAATCACGATTACCGCGGACACATCCACGAGCACGGCGTACATGGAACTGAGCAGCCTGACATCTGACGACGCGGG  270
V  89.0% (258/290)  IGHV1-69*09  186  ....T....G......G..................A............A..C........G.............G......G...A...C  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  R  G  V  F  P  G  G  L  R  E  S  W  G  Q  G  S  L  V  S  V  P  S  
                    Query_5668   271  CGTCTATTATTGTGCGAGAGGGGTCTTCCCGGGCGGGCTCAGGGAATCCTGGGGCCAGGGATCCCTGGTCTCCGTCCCCTCAG  353
V  89.0% (258/290)  IGHV1-69*09  276  ...G.....C..........---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
J  91.7% (33/36)    IGHJ5*02     16   -----------------------------------------------..............A........A.....T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_184459

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	ATGCGT	TATATCAGTGGC	CGTGTCGATCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAATGCGTTATATCAGTGGCCGTGTCGATCCATTTGACTAC	AKMRYISGRVDPFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5669   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-23*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  V  S  G  G  G  A  S  R  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5669   91   AGTGGGTCTCAGCTGTTAGTGGTGGTGGTGCTAGCAGATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  95.2% (236/248)  IGHV3-23*01  137  ..............A........A......G.....C................................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  A  L  R  A  G  D  T  A  V  Y  F  C  A  K  M  R  Y  I  S  G  R  
                    Query_5669   181  AGAACACGCTGTATCTCCAAATGAACGCCTTGAGAGCCGGGGACACGGCCGTATATTTCTGTGCGAAAATGCGTTATATCAGTGGCCGTG  270
V  95.2% (236/248)  IGHV3-23*01  227  ................G.........AG.C.........A.................A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  91.7% (11/12)    IGHD6-19*01  4    --------------------------------------------------------------------------....G.......----  15

                                      ---------------->                                  
                                      V  D  P  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_5669   271  TCGATCCATTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  321
J  97.7% (42/43)    IGHJ4*02     6    --------.....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_117831

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         436     2e-124
IGHD6-6*01                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CACAATTCCTC	TATAGCAGCTCGTCC	CCAATTAGCG	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACAATTCCTCTATAGCAGCTCGTCCCCAATTAGCGACTCCTACTACTACAATATGGACGTC	ATQFLYSSSSPISDSYYYNMDV	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	283	4	0	98.6


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_5670     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  98.6% (283/287)  IGHV5-10-1*01  6    .............................................................................G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  D  Y  S  P
                    Query_5670     91   CTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGAATTGATCCTAGTGACTCTTATACCGACTACAGCCC  180
V  98.6% (283/287)  IGHV5-10-1*01  96   ......................................................G........................A..........  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_5670     181  GTCCTTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCATCAGCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.6% (283/287)  IGHV5-10-1*01  186  ..........................................................................................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------------------CDR3-IMGT--------------------------->           
                                          M  Y  Y  C  A  T  Q  F  L  Y  S  S  S  S  P  I  S  D  S  Y  Y  Y  N  M  D  V  W  G  Q  G
                    Query_5670     271  CATGTATTACTGTGCGACACAATTCCTCTATAGCAGCTCGTCCCCAATTAGCGACTCCTACTACTACAATATGGACGTCTGGGGCCAAGG  360
V  98.6% (283/287)  IGHV5-10-1*01  276  .................-------------------------------------------------------------------------  292
                                          M  Y  Y  C  A                                                                           
D  100.0% (15/15)   IGHD6-6*01     4    ----------------------------...............-----------------------------------------------  18
J  94.9% (56/59)    IGHJ6*02       4    -----------------------------------------------------...A..........GG.....................  40

                                                              
                                          T  T  V  T  V  S  S 
                    Query_5670     361  GACCACGGTCACCGTCTCCTCA  382
J  94.9% (56/59)    IGHJ6*02       41   ......................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_201935

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD5-18*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              46.8    3e-09 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATAGTC	ATGGTTAC	GGCGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATAGTCATGGTTACGGCGGAGTTGACAAC	ARYSHGYGGVDN	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  Y  Y  W  S  W  I  L  Q  P  P  G  K  G  L  E 
                    Query_5671   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTAGTTACTACTGGAGCTGGATCCTGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.9% (238/243)  IGHV4-59*01  49   ...............................G................................G.........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  N  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5671   91   TGGATTGGGTATATCTACAACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  .................TT.......................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D 
                    Query_5671   181  CAGTTCTCCCTGAAGCTGAGATCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATATAGTCATGGTTACGGCGGAGTTGAC  270
V  97.9% (238/243)  IGHV4-59*01  229  ....................C..........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD5-18*01  13   ----------------------------------------------------------------------........------------  20
J  85.7% (36/42)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       N  W  G  Q  G  S  L  F  T  A  T  S  
                    Query_5671   271  AACTGGGGCCAGGGCAGCCTGTTCACCGCCACCTCAG  307
J  85.7% (36/42)    IGHJ4*02     12   T.............A.C....G......T.T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_20589

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	10	1	0	90.9
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	23	1	0	95.8
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	232	223	9	0	96.1


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_5672   14   GTACAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATTT  103
V  96.1% (223/232)  IGHV3-33*01  65   ..G.......................AG..A.........................................................A.  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  
                    Query_5672   104  GGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACGTTGTATCTGC  193
V  96.1% (223/232)  IGHV3-33*01  155  ....................................................................T...........C.........  244
                                      W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------------CDR3-IMGT-------------
                                      Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  I  D  Y  Y  Y  Y  
                    Query_5672   194  AAATGAACAGCCTGGGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACG  283
V  96.1% (223/232)  IGHV3-33*01  245  ..............A.........................C...........--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------..........----------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---------------------------------------------------------------------------.......C..C....  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5672   284  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  327
J  96.6% (57/59)    IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_20588

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD1-26*01                                                                                           14.1    9.3   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGG	TAGTGGG	CAATACAGTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCT	ARGGSGQYSAYFGS	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  I  S  D
                    Query_5673   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCATCTGGATACAGCTTTATCAGTGA  90
V  93.1% (269/289)  IGHV5-51*01  6    .............................A....................A..............GT................C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  G  K  G  L  D  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  S  P
                    Query_5673   91   CTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGACTGGATGGGGGTCATTTATCCTGGTGACTCTGAAACCAGATATAGTCC  180
V  93.1% (269/289)  IGHV5-51*01  96   .......................T..................G.........A....C.................T........C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  T  S  L  K  A  S  D  T  A
                    Query_5673   181  GTCCTTCCAAGGCCAGGTCACCATTTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGACCAGCCTGAAGGCCTCGGACACCGC  270
V  93.1% (269/289)  IGHV5-51*01  186  ........................C...................G....................G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  F  C  A  R  G  G  S  G  Q  Y  S  A  Y  F  G  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5673   271  CATATACTTCTGTGCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.1% (269/289)  IGHV5-51*01  276  ...G..T.A..........----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD1-26*01  5    ------------------------.......----------------------------------------------------------  11
J  93.6% (44/47)    IGHJ4*02     2    ------------------------------------------........A..AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_117830

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     6e-103
IGHD2-2*02                                                                                            16.1    2.6   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCAAGCAGTCGAGATTGTCCCAGTAACGC	CTGCTATA	AGGAATCAGATCTTTACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCAAGCAGTCGAGATTGTCCCAGTAACGCCTGCTATAAGGAATCAGATCTTTACCCCTACTACGGTATGGACCTC	ASSSRDCPSNACYKESDLYPYYGMDL	261	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	51	0	0	100
CDR2-IMGT	126	146	21	20	1	0	95.2
FR3-IMGT	147	260	114	107	7	0	93.9
CDR3-IMGT (germline)	261	263	3	3	0	0	100
Total	N/A	N/A	263	248	15	0	94.3


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  A  L  S  C  T  V  S  G  G  S  I  R  R  H  Y  W  S  W  I  R  
                    Query_5674   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGGCCCTCAGTTGCACTGTCTCTGGTGGCTCCATCAGGAGGCACTACTGGAGCTGGATCCGGC  90
V  94.3% (248/263)  IGHV4-59*01  26   ................T............T......CC..........................T..TT.....................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  E  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_5674   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGAGAGCACCAATTACAACCCCTCCCTCAAGAGTCGCGTCACCA  180
V  94.3% (248/263)  IGHV4-59*01  116  ................................................G.........C.......................A.......  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  A  D  T  S  K  N  Q  V  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  S  
                    Query_5674   181  TATCAGCAGACACGTCCAAGAATCAGGTCTCCCTGAAACTAAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGTCAAGCA  270
V  94.3% (248/263)  IGHV4-59*01  206  ......T...............C...T..........G..G..........................................-------  288
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A        

                                      -------------------------CDR3-IMGT--------------------------------->                      
                                      S  R  D  C  P  S  N  A  C  Y  K  E  S  D  L  Y  P  Y  Y  G  M  D  L  W  G  Q  G  T  T  V  
                    Query_5674   271  GTCGAGATTGTCCCAGTAACGCCTGCTATAAGGAATCAGATCTTTACCCCTACTACGGTATGGACCTCTGGGGCCAAGGGACCACGGTCG  360
D  100.0% (8/8)     IGHD2-2*02   22   ----------------------........------------------------------------------------------------  29
J  96.2% (50/52)    IGHJ6*02     11   -------------------------------------------------................G.......................A  51

                                                 
                                      A  V  S  S 
                    Query_5674   361  CCGTCTCCTCA  371
J  96.2% (50/52)    IGHJ6*02     52   ...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_20585

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           332     3e-93
IGHD3-10*01                                                                                           12.2    32   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AATATTTAAGACAA	TATGGT	ATCCGGCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGAAATATTTAAGACAATATGGTATCCGGCCGACTAT	GREIFKTIWYPADY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  E  Y  G  I  H  W  V  R  R  A  P  G  R  G  L  
                    Query_5675   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCAGGTTTCACCTTCAGTGAATATGGCATACACTGGGTCCGCCGGGCTCCAGGCAGGGGGCTGG  90
V  92.4% (231/250)  IGHV3-30*03  47   .....................C......T..A............AGC........G.............A...........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  D  G  S  N  K  F  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5675   91   AGTGGGTGGCACTTATATCATATGATGGAAGTAATAAATTCTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.4% (231/250)  IGHV3-30*03  137  ...........G...........................A.....C............................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  G  R  E  I  F  K  T  I  W  
                    Query_5675   181  AGAACACGCTGTATCTGCAAATCAACAGCCTGCGAGCTGAAGACACGGCCGTATATTATTGTGGGAGAGAAATATTTAAGACAATATGGT  270
V  92.4% (231/250)  IGHV3-30*03  227  ......................G.........A.......G........T..G.....C....C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01  8    ------------------------------------------------------------------------------------......  13

                                      ------------->                                  
                                      Y  P  A  D  Y  W  G  Q  G  T  L  V  S  V  S  T  
                    Query_5675   271  ATCCGGCCGACTATTGGGGCCAGGGAACCCTGGTCAGCGTCTCCACAG  318
J  92.5% (37/40)    IGHJ4*02     9    --------.....C......................C.......T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_20584

Length=414
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            447     8e-128
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	289	357	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	24	0	0	100
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	113	1	0	99.1
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	291	5	0	98.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_5676   1    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACC  90
V  98.3% (291/296)  IGHV1-2*04   1    .....G.................G.............AG...................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 
                    Query_5676   91   GGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTAT  180
V  98.3% (291/296)  IGHV1-2*04   91   ..........................................................................................  180
                                       G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 
                    Query_5676   181  GCACAGAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGAC  270
V  98.3% (291/296)  IGHV1-2*04   181  ..........................................................................................  270
                                       A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                      -----------------><-----------------------------CDR3-IMGT----------------------------->   
                                       T  A  V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W 
                    Query_5676   271  ACGGCCGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGG  360
V  98.3% (291/296)  IGHV1-2*04   271  .............A............----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.7% (18/19)    IGHD3-22*01  7    --------------------------------------...........G.......---------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ---------------------------------------------------------------....A......................  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_5676   361  GGCCAAGGGACCACGGTCACCGTCTCCTCA  390
J  98.2% (56/57)    IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40604112


Query= Query_20587

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           420     7e-120
IGHD3-10*01                                                                                           14.1    9.5   
IGHJ3*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	A	GGGGAGT	GGGGGCCCCTTCTTAGAGGCC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAAGGGGAGTGGGGGCCCCTTCTTAGAGGCCCTTTTGATATC	AKEGEWGPLLRGPFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  S  A  V  K  V  A  C  K  A  S  G  G  T  F  S  N  Y
                    Query_5677   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGTCCGCGGTGAAAGTCGCCTGCAAGGCTTCTGGAGGCACCTTCAGCAACTA  90
V  96.2% (280/291)  IGHV1-69*01  6    ..................G..........A.............T.......G...T..............................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  F  F  G  T  A  N  Y  A  Q
                    Query_5677   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTTTCTTTGGTACAGCAAACTACGCACA  180
V  96.2% (280/291)  IGHV1-69*01  96   ....................................................G...........A.........................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  L  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_5677   181  GAGGTTGCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  96.2% (280/291)  IGHV1-69*01  186  ..A...C...................................................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  K  E  G  E  W  G  P  L  L  R  G  P  F  D  I  W  G  Q  G  T  M  V  I  V  S
                    Query_5677   271  CGTGTATTACTGTGCGAAAGAAGGGGAGTGGGGGCCCCTTCTTAGAGGCCCTTTTGATATCTGGGGCCAAGGGACAATGGTCATCGTCTC  360
V  96.2% (280/291)  IGHV1-69*01  276  .................G...---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-10*01  16   ----------------------.......-------------------------------------------------------------  22
J  97.8% (44/45)    IGHJ3*02     6    --------------------------------------------------.................................C......  45

                                           
                                        S  
                    Query_5677   361  TTCAG  365
J  97.8% (44/45)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_20581

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-16*02                                                                                           12.2    32   
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGT	TCGTTA	CCCAATCTTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTTCGTTACCCAATCTTGGCTACTACTACGGTATGGGCGTC	ARDRSLPNLGYYYGMGV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  M  G  L  E 
                    Query_5678   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGATGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...............................G.........T...........................C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  Y  S  G  T  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_5678   91   TGGATTGGGCATATCTATTACAGTGGGACCACCAGTTACAATCCTTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAT  180
V  93.5% (229/245)  IGHV4-59*01  139  .........T..................G.....AC.....C..C...........................G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  S  L  P  N  L  G  Y 
                    Query_5678   181  CAGTTCTCCCTGAAGCTGAATTCCGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATCGTTCGTTACCCAATCTTGGCTAC  270
V  93.5% (229/245)  IGHV4-59*01  229  ...................GC..T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*02  28   ---------------------------------------------------------------------......---------------  33
J  94.5% (52/55)    IGHJ6*02     8    --------------------------------------------------------------------------------------....  11

                                      ----------------->                                 
                                       Y  Y  G  M  G  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_5678   271  TACTACGGTATGGGCGTCTGGGGCCAAGGGGCCACCGTCACCGTCTCCTCA  321
J  94.5% (52/55)    IGHJ6*02     12   .............A................A....G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_117833

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD3-16*01                                                                                           12.2    35    
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTTGAGG	GATTAC	CAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTAC	ARSLRDYQPFYFDY	281	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	67	56	55	1	0	98.2
CDR1-IMGT	68	91	24	22	2	0	91.7
FR2-IMGT	92	142	51	51	0	0	100
CDR2-IMGT	143	166	24	24	0	0	100
FR3-IMGT	167	280	114	112	2	0	98.2
CDR3-IMGT (germline)	281	286	6	6	0	0	100
Total	N/A	N/A	275	270	5	0	98.2


Alignments

                                      <-----------------------FR1-IMGT-----------------------><-------CDR1-IMGT------><---------
                                         G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y  W  I  G  W  
                    Query_5679   12   CTGGTGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTACTGGATCGGCTGGG  101
V  98.2% (270/275)  IGHV5-51*03  20   ....A..........................................................G........G.................  109
                                         G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W  I  G  W  

                                      -----------FR2-IMGT---------------------><-------CDR2-IMGT------><------------------------
                                      V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S  F  Q  G  
                    Query_5679   102  TGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCCGTCCTTCCAAGGCC  191
V  98.2% (270/275)  IGHV5-51*03  110  ..........................................................................................  199
                                      V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S  F  Q  G  

                                      ----------------------------FR3-IMGT----------------------------------------------------><
                                      Q  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M  Y  Y  C  
                    Query_5679   192  AGGTCACCGTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACTGCCATGTATTACTGTG  281
V  98.2% (270/275)  IGHV5-51*03  200  ........A................................................................C................  289
                                      Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M  Y  Y  C  

                                      ----------------CDR3-IMGT--------------->                                  
                                      A  R  S  L  R  D  Y  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_5679   282  CGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  356
V  98.2% (270/275)  IGHV5-51*03  290  .....----------------------------------------------------------------------  294
                                      A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  8    --------------......-------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ----------------------------....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_20583

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         329     3e-92
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	CGACCCCAAGGCCAAAGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACCCCAAGGCCAAAGCCTTGACTAC	ARRPQGQSLDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  A  V  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5680     1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTCAGTAATTATGCTGTCCACTGGGTCCGCCAGGCCCCAGGCAAGGGGCTGG  90
V  92.3% (229/248)  IGHV3-30-3*01  47   .....................C.......................GC......A.G.................T................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  V  G  G  N  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5680     91   AGTGGGTGGCGGTTATATCATATGTTGGAGGCAATAAAAATTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.3% (229/248)  IGHV3-30-3*01  137  ..........A.............A....A........T.C..C.C............................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                        K  N  T  L  F  L  E  M  N  S  L  R  P  D  D  T  A  V  Y  Y  C  A  R  R  P  Q  G  Q  S  L  
                    Query_5680     181  AGAACACGCTGTTTCTGGAAATGAACAGCCTGAGACCTGACGACACGGCTGTCTACTACTGTGCGAGACGACCCCAAGGCCAAAGCCTTG  270
V  92.3% (229/248)  IGHV3-30-3*01  227  ............A....C.................G....G...........G..T............----------------------  294
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  97.6% (41/42)    IGHJ4*02       7    ---------------------------------------------------------------------------------------...  9

                                        ---->                                  
                                        D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_5680     271  ACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  309
J  97.6% (41/42)    IGHJ4*02       10   ...........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_20582

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            313     1e-87
IGHD6-13*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTAGTAACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTAGTAACACCTGGTACTCGGGGTTTTGATTCC	AGHLVTPGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	104	10	0	91.2
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	223	23	0	90.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_5681   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  90.7% (223/246)  IGHV4-4*01   49   ........................................G..GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  A  E  I  H  H  G  G  P  T  N  Y  N  P  A  L  E  S  R  V  T  I  S  V  D  K  S  N 
                    Query_5681   91   GAGTGGATAGCGGAAATCCATCATGGTGGACCCACCAACTACAACCCGGCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAC  180
V  90.7% (223/246)  IGHV4-4*01   139  ........T.G.......T.....A....GAG................T.....A..................................G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       S  Q  F  S  L  S  L  S  S  L  T  A  A  D  T  T  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_5681   181  AGCCAATTCTCCCTGAGCCTGAGCTCTCTGACCGCCGCGGACACGACCGTGTATTTCTGTGCGGGACATCTAGTAACACCTGGTACTCGG  270
V  90.7% (223/246)  IGHV4-4*01   229  .A...G..........AG.........G.................G.........G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5681   271  GGTTTTGATTCCTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.....C.A............A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_195968

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGGACAC	TGTAGTAGTGCCATCTGCGATG	GACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTAC	ARHMGHCSSAICDGPDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  Q  K  P  G  E  A  L  K  I  S  C  K  G  S  G  Y  S  F  G  S  Y
                    Query_5682   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGCAAAAGCCGGGGGAGGCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCAGTTA  90
V  95.9% (279/291)  IGHV5-51*01  6    ............................A.......C......T......................................AC...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  P  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_5682   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCCGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G.............................T...................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  P  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_5682   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTATCAGCACCGCCTACCCGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  .............................C.........C................T................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  M  G  H  C  S  S  A  I  C  D  G  P  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_5682   271  CATGTATTACTGTGCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  95.9% (279/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  86.4% (19/22)    IGHD2-2*01   8    -------------------------------.........A...G....T...-------------------------------------  29
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_5682   361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_117835

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-22*01                                                                                           25.7    0.003
IGHJ5*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGGGGCGCGCCC	GTATTACTTTGATAGT	CATAGGCCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCGGGGGCGCGCCCGTATTACTTTGATAGTCATAGGCCTTTCGACTCC	ARAGARPYYFDSHRPFDS	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_5683   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*01  49   ..................A.......................A....................................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  S  K  N 
                    Query_5683   91   TGGATTGGGTATATGTATTACAGTGGTAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCCTATCAGTAGACACGTCCAAGAAC  180
V  95.9% (234/244)  IGHV4-59*01  139  ..............C...........G.......................................A.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       L  F  S  L  K  L  F  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  A  R  P  Y  Y  F  D 
                    Query_5683   181  CTGTTCTCCCTGAAGCTGTTCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGCGGGGGCGCGCCCGTATTACTTTGAT  270
V  95.9% (234/244)  IGHV4-59*01  229  .A................AG........................................A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.8% (15/16)    IGHD3-22*01  1    -----------------------------------------------------------------------------........A....  13

                                      -------------------->                                  
                                       S  H  R  P  F  D  S  W  G  Q  G  A  L  V  S  V  S  S  
                    Query_5683   271  AGTCATAGGCCTTTCGACTCCTGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  325
D  93.8% (15/16)    IGHD3-22*01  14   ...----------------------------------------------------  16
J  93.0% (40/43)    IGHJ5*01     9    ------------.................A...A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_6421

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           321     6e-90
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_5684   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_5684   91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_5684   181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.8% (225/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  92.0% (46/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  Q  G  T  M  V  T  V  S  S  
                    Query_5684   271  GGCCAAGGGACAATGGTCACCGTGTCTTCAG  301
J  92.0% (46/50)    IGHJ3*02     20   .......................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_84369

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD2-8*01                                                                                            12.2    31   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GTATCC	CTAATG	CCACCTTCA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGTATCCCTAATGCCACCTTCAACTTTGACTAC	AKGIPNATFNFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5685   1    GGTCCCTGAGACTCTCCTGTGCAGCATCTGGATTCACCTTTACCACCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-23*01  47   .........................C................G..G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  V  I  G  V  S  D  T  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5685   91   ACTGGGTCTCAGTAATTGGTGTTAGTGATACTAAGACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-23*01  137  .G..........CT...A...G.....G.GG..GC.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  I  P  N  A  T  F  
                    Query_5685   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGGTATCCCTAATGCCACCTTCA  270
V  94.4% (235/249)  IGHV3-23*01  227  .....................................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-8*01   12   ---------------------------------------------------------------------------......---------  17

                                      ---------->                                  
                                      N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5685   271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (45/45)   IGHJ4*02     4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_117836

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           316     2e-88
IGHD2-15*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCAGGGACAG	TGTATTGGTGGTAGGTGCTAC	CCTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGAGCAGGGACAGTGTATTGGTGGTAGGTGCTACCCTGCCTACTTTGACTAC	AREQGQCIGGRCYPAYFDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  T  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5686   1    GGTCCCTGAGACTCTCCTGTGTCGCGTCTGGGTTCACCTTCAGTACCTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-33*01  47   .....................CA........A.............G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  S  D  G  G  N  K  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_5686   91   AGTGGGTGGCGCTTATTTGGTCTGATGGAGGTAACAAATATTACTCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCA  180
V  90.4% (226/250)  IGHV3-33*01  137  ..........AG....A....A.......A....T.....C..TG.......................................A.....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  S  L  Q  L  N  S  L  R  V  D  D  T  A  V  Y  Y  C  A  R  E  Q  G  Q  C  I  G  
                    Query_5686   181  AGAATACGCTGTCTCTCCAATTGAACAGCCTGCGAGTCGACGACACGGCTGTTTATTACTGTGCGCGAGAGCAGGGACAGTGTATTGGTG  270
V  90.4% (226/250)  IGHV3-33*01  227  ....C.......A...G...A...........A...C...G...........G............A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD2-15*01  8    --------------------------------------------------------------------------------....G.....  17

                                      -IMGT----------------------->                                  
                                      G  R  C  Y  P  A  Y  F  D  Y  W  G  K  G  T  L  V  S  V  S  S  
                    Query_5686   271  GTAGGTGCTACCCTGCCTACTTTGACTACTGGGGCAAGGGAACCCTGGTCTCCGTCTCCTCAG  333
D  90.5% (19/21)    IGHD2-15*01  18   ....C......----------------------------------------------------  28
J  95.7% (45/47)    IGHJ4*02     2    ----------------...................C..............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_79550

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            375     3e-106
IGHD1-26*01                                                                                           12.2    35    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	283	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	69	66	65	1	0	98.5
CDR1-IMGT	70	93	24	22	2	0	91.7
FR2-IMGT	94	144	51	48	3	0	94.1
CDR2-IMGT	145	168	24	21	3	0	87.5
FR3-IMGT	169	282	114	100	14	0	87.7
CDR3-IMGT (germline)	283	289	7	7	0	0	100
Total	N/A	N/A	286	263	23	0	92


Alignments

                                      <----------------------------FR1-IMGT----------------------------><-------CDR1-IMGT------>
                                       L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y  D 
                    Query_5687   4    CTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACCACTTATGAT  93
V  92.0% (263/286)  IGHV1-8*01   10   ..............................................................T........C..........G.......  99
                                       L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y  D 

                                      <--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------------
                                       I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F  A  Q  R 
                    Query_5687   94   ATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTTGCACAGAGA  183
V  92.0% (263/286)  IGHV1-8*01   100  .............................A..G..............A..............C.G...T..........A........AG  189
                                       I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q  K 

                                      --------------------------------------FR3-IMGT--------------------------------------------
                                       F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D  T  A  I 
                    Query_5687   184  TTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGACACGGCCATA  273
V  92.0% (263/286)  IGHV1-8*01   190  ...C............................C.....A.................GC............G..C..AG.........G.G  279
                                       F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A  V 

                                      --------><-------------CDR3-IMGT------------>                                 
                                       Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_5687   274  TATTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  351
V  92.0% (263/286)  IGHV1-8*01   280  ................--------------------------------------------------------------  295
                                       Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   -------------------------...G.....--------------------------------------------  18
J  100.0% (40/40)   IGHJ5*02     11   --------------------------------------........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_27606

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           344     6e-97
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCACTC	CTATGGATCGGGGGGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTCCTATGGATCGGGGGGTTATTATGCTCAAGAC	ARGHSYGSGGYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5688   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.0% (235/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  A  T  M  S  V  D  T  S 
                    Query_5688   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGCCACCATGTCAGTGGACACGTCT  180
V  94.0% (235/250)  IGHV4-31*03  139  ..................................G................................TT.....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  T  D  T  A  V  F  Y  C  A  R  G  H  S  Y  G  S  G 
                    Query_5688   181  AAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCACGGACACGGCCGTCTTTTACTGCGCGAGAGGTCACTCCTATGGATCGGGG  270
V  94.0% (235/250)  IGHV4-31*03  229  .....................C...G.............G.............G.A......T.......--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (20/22)    IGHD3-10*01  7    -----------------------------------------------------------------------------......T......  19

                                      ----------------->                                  
                                       G  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5688   271  GGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  90.9% (20/22)    IGHD3-10*01  20   A........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_27605

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           357     1e-100
IGHD6-13*01                                                                                           21.8    0.041 
IGHJ3*01                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  L  S  G  G  S  I  S  S  G  G  F  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_5689   1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGGCTCCATCAGCAGTGGTGGTTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.6% (239/250)  IGHV4-31*03  49   .....................G..............................A........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_5689   91   CTGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCT  180
V  95.6% (239/250)  IGHV4-31*03  139  .....................T..................A.................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V 
                    Query_5689   181  AAGAACCAATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTA  270
V  95.6% (239/250)  IGHV4-31*03  229  ........G..........A.....GC...............................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD6-13*01  11   ------------------------------------------------------------------------...........-------  21

                                      ----------------->                                  
                                       G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5689   271  GGCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  98.0% (48/49)    IGHJ3*01     2    ---.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_27604

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           336     2e-94
IGHD3-10*01                                                                                           12.2    37   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GACCCTCACGTTCAACTTTGAAAGTAC	TTATAA	TCCTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGAGACCCTCACGTTCAACTTTGAAAGTACTTATAATCCTTACTACTTTGACAGC	ARETLTFNFESTYNPYYFDS	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	94	20	0	82.5
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	253	38	0	86.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  I  S  C  E  A  S  A  D  T  F  R  T  Y
                    Query_5690   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCGTCGGTGAAGATCTCCTGCGAGGCTTCTGCAGACACCTTCAGGACGTA  90
V  86.9% (253/291)  IGHV1-69*01  6    ..................G.......................C.........G........A.........G..G.........C.GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  A  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  E  I  I  P  L  V  G  T  T  R  N  A  H
                    Query_5690   91   TGCTATCGCCTGGGTGCGACAGGCCCCTGGACAAGGGCTGGAGTGGATGGGAGAGATCATCCCTCTCGTTGGCACAACAAGAAACGCACA  180
V  86.9% (253/291)  IGHV1-69*01  96   .......AG..............................T.............G..........A..T....T...G...ACT.......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  P  R  I  T  I  S  A  D  P  S  T  S  T  A  Y  L  E  L  S  S  L  R  S  E  D  T  A
                    Query_5690   181  CCCTTTCCAGCCCAGAATCACGATTAGCGCGGACCCCTCTACGAGCACTGCCTACTTGGAATTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  86.9% (253/291)  IGHV1-69*01  186  GAAG......GG....G.........C.......GAA..C........A......A....GC............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        V  Y  Y  C  A  R  E  T  L  T  F  N  F  E  S  T  Y  N  P  Y  Y  F  D  S  W  G  Q  G  T  L
                    Query_5690   271  CGTATATTACTGTGCGCGAGAGACCCTCACGTTCAACTTTGAAAGTACTTATAATCCTTACTACTTTGACAGCTGGGGCCAGGGCACCCT  360
V  86.9% (253/291)  IGHV1-69*01  276  ...G............A....---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-10*01  25   ------------------------------------------------......------------------------------------  30
J  89.6% (43/48)    IGHJ4*02     1    -----------------------------------------------------------...........TA............A.....  31

                                                       
                                        V  V  V  S  S  
                    Query_5690   361  GGTCGTCGTCTCCTCAG  377
J  89.6% (43/48)    IGHJ4*02     32   ....AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_27603

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           378     3e-107
IGHD2-8*02                                                                                            18.0    0.69  
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTACCCTCAATTACGTTGAC	ACTGGTGGT	TACGAACTGGAATAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTACCCTCAATTACGTTGACACTGGTGGTTACGAACTGGAATAT	ARPTLNYVDTGGYELEY	293	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	178	33	23	1	9	69.7
FR3-IMGT	179	292	114	105	9	0	92.1
CDR3-IMGT (germline)	293	298	6	6	0	0	100
Total	N/A	N/A	298	272	17	9	91.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  Q  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  N  F
                    Query_5691   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCGGGGCAGTCTCTGAAGATCTCCTGTAAGGCCTCTGGATACAGCTTTACCAACTT  90
V  91.3% (272/298)  IGHV5-51*03  6    .............................A..........G........................GT...................G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-----------CDR2-IMGT-----------><-
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  L  I  Y  P  G  D  S  G  D  S  D  T  R
                    Query_5691   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGCTCATCTATCCTGGTGACTCTGGTGACTCTGACACCAG  180
V  91.3% (272/298)  IGHV5-51*03  96   ....................................................A.........---------.............T.....  176
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y           P  G  D  S  D  T  R

                                      ---------------------------------------------------FR3-IMGT-------------------------------
                                        I  S  P  S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  N  T  A  Y  L  E  W  S  S  L  K  A  S
                    Query_5691   181  AATCAGTCCGTCCTTCCAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCAATACCGCCTACCTGGAGTGGAGCAGCCTGAAGGCCTC  270
V  91.3% (272/298)  IGHV5-51*03  177  .TA...C..........................C...................GC............C......................  266
                                        Y  S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S

                                      ---------------------><--------------------CDR3-IMGT-------------------->                 
                                        D  A  A  I  Y  Y  C  A  R  P  T  L  N  Y  V  D  T  G  G  Y  E  L  E  Y  W  G  Q  G  T  R
                    Query_5691   271  GGACGCCGCCATATATTACTGTGCGAGACCTACCCTCAATTACGTTGACACTGGTGGTTACGAACTGGAATATTGGGGCCAGGGAACCCG  360
V  91.3% (272/298)  IGHV5-51*03  267  ....A.......G...............--------------------------------------------------------------  294
                                        D  T  A  M  Y  Y  C  A  R                                                               
D  100.0% (9/9)     IGHD2-8*02   11   -------------------------------------------------.........--------------------------------  19
J  97.1% (33/34)    IGHJ4*02     15   -------------------------------------------------------------------------................T  31

                                                       
                                        V  T  V  S  S  
                    Query_5691   361  GGTCACCGTCTCCTCAG  377
J  97.1% (33/34)    IGHJ4*02     32   .................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_79555

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     2e-87
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ1*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GACTCATGGGGGCGACTTTCG	ATGATGGTACTGGTTATTAC	C	CTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGGGGGCGACTTTCGATGATGGTACTGGTTATTACCCTGAATACTTCGACCAC	ARLMGATFDDGTGYYPEYFDH	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	223	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  R  F  G  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5692   1    GGTCCCTGAGACTCTCCTGTGCGGGCTCTGGATTCAGGTTTGGCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.7% (223/246)  IGHV3-23*01  47   ......................A.C...........CC...A...............G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  T  I  S  G  S  G  A  S  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  S  D  T  S  
                    Query_5692   91   AGTGGCTCGCAACTATTAGCGGTAGTGGTGCTTCCACATACTACGCAGACTCCGTGAGGGGCCGGTTCACCATCTCCAGCGACACTTCCG  180
V  90.7% (223/246)  IGHV3-23*01  137  .....G..T..G.......T..........G.AG.......................A.....................A....A....A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      A  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  H  Y  C  A  R  L  M  G  A  T  F  D  
                    Query_5692   181  CGAACACACTGTATTTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTGCATTACTGTGCGAGACTCATGGGGGCGACTTTCGATG  270
V  90.7% (223/246)  IGHV3-23*01  227  A......G......C.....................C...............AT............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.0% (18/20)    IGHD3-22*01  9    ---------------------------------------------------------------------------------------...  11

                                      DR3-IMGT-------------------------->                                  
                                      D  G  T  G  Y  Y  P  E  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5692   271  ATGGTACTGGTTATTACCCTGAATACTTCGACCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  339
D  90.0% (18/20)    IGHD3-22*01  12   ..A...G..........----------------------------------------------------  28
J  96.1% (49/51)    IGHJ1*01     2    ------------------...........C.G.....................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_27601

Length=315
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            358     3e-101
IGHD2-8*01                                                                                            12.2    29    
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	TGGTGT	GCGG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGGTGTGCGG	ASGVR	243	257	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  S  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5693  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAACAGTTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (238/247)  IGHV3-7*01  47   .............................................G.TA.........C...............................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  P  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5693  91   AGTGGGTGGCCAACATAAAGCCAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (238/247)  IGHV3-7*01  137  .....................A....................................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--CDR3-IMGT-->             
                                     K  S  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  G  V  R  W  G  Q  G  
                    Query_5693  181  AAAGCTCACTGTTTCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGTGGTGTGCGGTGGGGCCAGGGAA  270
V  96.4% (238/247)  IGHV3-7*01  227  .G.A........A.......................C..............................-----------------------  293
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD2-8*01  16   -------------------------------------------------------------------......-----------------  21
J  100.0% (34/34)   IGHJ4*02    15   -----------------------------------------------------------------------------.............  27

                                                          
                                     T  L  V  T  V  S  S  
                    Query_5693  271  CCCTGGTCACCGTCTCCTCAG  291
J  100.0% (34/34)   IGHJ4*02    28   .....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30410208


Query= Query_79557

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           372     2e-105
IGHD1-1*01                                                                                            12.2    33    
IGHJ5*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	CCCGACATATGTCCTCGAG	GGAACG	GAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGACCCGACATATGTCCTCGAGGGAACGGATTGGTTCGACCCC	TTDPTYVLEGTDWFDP	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	247	9	0	96.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  G  P  G  K  G  L  
                    Query_5694   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGGTCCAGGGAAGGGGCTGG  90
V  96.5% (247/256)  IGHV3-15*01  47   .......T................................................................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  T  D  G  E  T  K  E  Y  A  A  P  V  K  G  R  F  A  I  S  R  D  
                    Query_5694   91   AGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGAGACAAAAGAGTACGCTGCACCCGTGAAAGGCAGATTCGCCATCTCAAGAGATG  180
V  96.5% (247/256)  IGHV3-15*01  137  ....................................G.....C...C...........................A...............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  F  C  T  T  D  P  T  Y  V  
                    Query_5694   181  ATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTCAAATCCGAGGACACAGCCGTGTATTTCTGTACCACAGACCCGACATATGTCC  270
V  96.5% (247/256)  IGHV3-15*01  227  .....................................G...A.....................A............--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 

                                      R3-IMGT------------------>                                  
                                      L  E  G  T  D  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5694   271  TCGAGGGAACGGATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (6/6)     IGHD1-1*01   10   -----......-------------------------------------------------  15
J  100.0% (46/46)   IGHJ5*02     6    --------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_79559

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         307     1e-85
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAG	G	TCGGGGAG	ACGCGGTATCCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGGTCGGGGAGACGCGGTATCCCCCTTTGAATAC	AKGRGDAVSPFEY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  T  Y  G  F  H  C  S  W  I  R  Q  P  P  G  K  G 
                    Query_5695     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCACCTATGGTTTCCACTGCAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  89.2% (223/250)  IGHV4-30-4*01  49   ..................A........................GTGG..A..A.T....G..............................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  S  Y  S  G  N  T  Y  Y  N  P  S  L  R  G  R  G  A  M  S  L  D  T  S 
                    Query_5695     91   CTGGAGTGGATTGGGTACATCTCTTACAGTGGGAATACCTACTACAACCCGTCCCTCAGGGGTCGAGGTGCCATGTCACTAGACACGTCC  180
V  89.2% (223/250)  IGHV4-30-4*01  139  ......................A...........GC......................A.A......T.A....A...G...........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         E  N  R  V  S  L  T  V  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  G  R  G  D  A  V  S 
                    Query_5695     181  GAGAACCGGGTCTCCCTGACGGTGAACTCTGTGACTGCCGCAGACACGGCCGTATATTTCTGTGCCAAAGGTCGGGGAGACGCGGTATCC  270
V  89.2% (223/250)  IGHV4-30-4*01  229  A......A.T.........A.C...G...........................G....A........G..--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-10*01    14   -----------------------------------------------------------------------........-----------  21

                                        ----------->                                
                                         P  F  E  Y  W  G  Q  G  A  L  V  T  V  S  S
                    Query_5695     271  CCCTTTGAATACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTC  314
J  95.2% (40/42)    IGHJ4*02       5    --......C...............A...................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_27609

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           341     6e-96
IGHD6-19*01                                                                                           16.1    2.4  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CTCTGTGAC	CAGTGCCTGGT	CGTTTGGTCCCCCCCCACGACTCT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACTCTGTGACCAGTGCCTGGTCGTTTGGTCCCCCCCCACGACTCTACTTCTTTGACTCC	ARHSVTSAWSFGPPPRLYFFDS	246	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  T  T  Y  H  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_5696   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTACTACTTACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  93.6% (234/250)  IGHV4-39*01  50   .....TCC...A.................................G..G....T..................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  S  Y  S  G  S  T  D  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  
                    Query_5696   94   TGGAGTGGATTGGGAGTATCTCTTATAGTGGGAGCACCGACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCCGTGGACACGTCCA  183
V  93.6% (234/250)  IGHV4-39*01  140  .....................A................T..................A.....................A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  P  D  T  A  V  Y  Y  C  A  R  H  S  V  T  S  A  W  
                    Query_5696   184  AGAATCAATTCTCCCTGAAGCTGAGCTCTGTGACCGCCCCAGACACGGCTGTATATTACTGTGCGAGACACTCTGTGACCAGTGCCTGGT  273
V  93.6% (234/250)  IGHV4-39*01  230  ....C..G..............................G.............G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD6-19*01  9    -------------------------------------------------------------------------------.....G.....  19

                                      -CDR3-IMGT--------------------------->                                  
                                      S  F  G  P  P  P  R  L  Y  F  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5696   274  CGTTTGGTCCCCCCCCACGACTCTACTTCTTTGACTCCTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  345
J  93.8% (45/48)    IGHJ4*02     1    ------------------------...A........A..................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_27608

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           364     6e-103
IGHD2-15*01                                                                                           14.1    9.8   
IGHJ6*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGGGCTGCATC	TTGTAGCGGT	TCCAATTGCTACGACTTAGG	CGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGCTGCATCTTGTAGCGGTTCCAATTGCTACGACTTAGGCGGAATGGACGTC	ARRAASCSGSNCYDLGGMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	261	28	0	90.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  L  G  S  G  Y  S  F  V  K  Y
                    Query_5697   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCTGGGTTCTGGATACAGCTTTGTCAAATA  90
V  90.3% (261/289)  IGHV5-51*03  6    ..............................A..............................AA...................AC..GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  T  P  G  K  G  L  E  W  M  G  T  I  Y  P  S  D  S  D  T  R  Y  S  P
                    Query_5697   91   TTGGATTGCTTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGGACCATCTATCCGTCTGACTCTGATACCCGATACAGCCC  180
V  90.3% (261/289)  IGHV5-51*03  96   C.....C.GC.............T.............................T.........TGG.............A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  L  S  T  A  F  L  Q  W  S  S  L  G  V  S  D  S  A
                    Query_5697   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTCTCTCCACCGCCTTCCTGCAGTGGAGCAGCCTGGGGGTCTCGGACAGCGC  270
V  90.3% (261/289)  IGHV5-51*03  186  .............................C.........CA..AG........A...................AA..C........C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        I  Y  Y  C  A  R  R  A  A  S  C  S  G  S  N  C  Y  D  L  G  G  M  D  V  W  G  R  G  T  T
                    Query_5697   271  CATTTATTACTGTGCGAGACGGGCTGCATCTTGTAGCGGTTCCAATTGCTACGACTTAGGCGGAATGGACGTCTGGGGCCGAGGGACCAC  360
V  90.3% (261/289)  IGHV5-51*03  276  ...G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  90.0% (9/10)     IGHD2-15*01  7    ------------------------------......T...--------------------------------------------------  16
J  93.5% (43/46)    IGHJ6*02     17   ------------------------------------------------------------...T................A.........  46

                                                      
                                        V  I  V  S  S 
                    Query_5697   361  GGTCATCGTCTCCTCA  376
J  93.5% (43/46)    IGHJ6*02     47   .....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_84364

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD2-2*01                                                                                            14.1    9.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTCAATTTGGTTCCGCAAATGG	GTACCAG	N/A	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTCAATTTGGTTCCGCAAATGGGTACCAGTACGGCATGGACGTC	ARFQFGSANGYQYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  E  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_5698   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGGAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  97.6% (282/289)  IGHV5-51*03  6    ............................A.............................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_5698   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATTGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  97.6% (282/289)  IGHV5-51*03  96   ................................................G.........................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  R  V  T  F  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  R  A  S  D  S  A
                    Query_5698   181  GTCCTTCCAAGGCCGGGTCACCTTCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACAGCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  ..............A.......A.....................G.............................A...........C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  F  Q  F  G  S  A  N  G  Y  Q  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_5698   271  CATGTATTACTGTGCGAGATTTCAATTTGGTTCCGCAAATGGGTACCAGTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  97.6% (282/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-2*01   15   ------------------------------------------.......-----------------------------------------  21
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------------.....T...................................  55

                                             
                                        S  S 
                    Query_5698   361  CTCCTCA  367
J  97.9% (47/48)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_300381

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           341     5e-96
IGHD3-10*01                                                                                           19.9    0.15 
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	TTCG	CTATGTTTCGGGG	TTCAGGG	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCATTCGCTATGTTTCGGGGTTCAGGGGGTATGGACGTC	AFAMFRGSGGMDV	237	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	24	0	0	100
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	111	3	0	97.4
CDR3-IMGT (germline)	237	239	3	3	0	0	100
Total	N/A	N/A	228	223	5	0	97.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  A  S  R  I 
                    Query_5699   12   TGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGCCTCACGTATT  101
V  97.8% (223/228)  IGHV3-74*01  64   ...............................................................................T..........  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       K  S  D  G  S  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 
                    Query_5699   102  AAGAGTGATGGGAGTAGCACATACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACACTGTATCTG  191
V  97.8% (223/228)  IGHV3-74*01  154  ..T..................AG.........................................................G.........  243
                                       N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------CDR3-IMGT-------------->      
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  F  A  M  F  R  G  S  G  G  M  D  V  W  G 
                    Query_5699   192  CAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCATTCGCTATGTTTCGGGGTTCAGGGGGTATGGACGTCTGGGGC  281
V  97.8% (223/228)  IGHV3-74*01  244  ................................................------------------------------------------  291
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  92.3% (12/13)    IGHD3-10*01  7    ----------------------------------------------------.....G.......-------------------------  19
J  100.0% (45/45)   IGHJ6*02     18   ------------------------------------------------------------------------..................  35

                                                                 
                                       Q  G  T  T  V  T  V  S  S 
                    Query_5699   282  CAAGGGACCACGGTCACCGTCTCCTCA  308
J  100.0% (45/45)   IGHJ6*02     36   ...........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_300380

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            360     1e-101
IGHD3-10*01                                                                                           10.3    120   
IGHJ6*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TATATATCCTCTCTACCG	CGGGG	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATATATATATCCTCTCTACCGCGGGGGGTATGGACCTT	AKDIYILSTAGGMDL	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	252	10	10	0	0	100
Total	N/A	N/A	252	241	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  K  A  S  G  F  T  F  N  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5700   1    GGTCCCTGAGACTCTCCTGTAAAGCCTCTGGATTCACCTTTAATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  95.6% (241/252)  IGHV3-9*01   47   ....................GC...................G................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  T  W  N  S  G  S  M  G  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_5700   91   AGTGGGTCTCAGGTATTACTTGGAATAGTGGTAGTATGGGGTATGCGGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  95.6% (241/252)  IGHV3-9*01   137  ..................G...............C..A..C..............................A..................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  K  D  I  Y  I  L  S  T  
                    Query_5700   181  AGAACTCCCTGTATCTCCAAATGAACAGTCTGAGAGTTGAGGACACGGCCTTATATTACTGTGCAAAAGATATATATATCCTCTCTACCG  270
V  95.6% (241/252)  IGHV3-9*01   227  ................G...................C...............G...................------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                      ---------------->                                 
                                      A  G  G  M  D  L  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_5700   271  CGGGGGGTATGGACCTTTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  320
D  100.0% (5/5)     IGHD3-10*01  15   .....---------------------------------------------  19
J  93.3% (42/45)    IGHJ6*02     18   -----.........G.C......................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_300383

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           343     2e-96
IGHD3-10*01                                                                                           21.8    0.045
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TCAGCCCCGGAGATGGG	ACTCTGGTTCGGGG	CCCCGGAGATGGGGCTATGGTTCGAAGAAGGGGCAG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGCCCCGGAGATGGGACTCTGGTTCGGGGCCCCGGAGATGGGGCTATGGTTCGAAGAAGGGGCAGCTACGATCTGGACGTC	VSPGDGTLVRGPGDGAMVRRRGSYDLDV	243	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	231	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  C  Y  M  N  W  I  R  Q  A  P  G  K  G  L  
                    Query_5701   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTGCTACATGAACTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.1% (231/243)  IGHV3-11*01  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  G  R  S  G  R  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5701   91   AGTGGATTTCGTACATTGGTCGCAGTGGTAGAACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  95.1% (231/243)  IGHV3-11*01  137  .....G....A......A..A.T........T..........................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  M  A  V  Y  Y  C  V  S  P  G  D  G  T  L  V  
                    Query_5701   181  AGAACTCACTTTATCTGCAAATGAACAGCCTGAGAGCCGATGACATGGCCGTCTATTACTGTGTCAGCCCCGGAGATGGGACTCTGGTTC  270
V  95.1% (231/243)  IGHV3-11*01  227  ..........G.............................G....C......G..........---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  92.9% (13/14)    IGHD3-10*01  6    --------------------------------------------------------------------------------...A......  15

                                      ----------CDR3-IMGT------------------------------------>                                 
                                      R  G  P  G  D  G  A  M  V  R  R  R  G  S  Y  D  L  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_5701   271  GGGGCCCCGGAGATGGGGCTATGGTTCGAAGAAGGGGCAGCTACGATCTGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  359
D  92.9% (13/14)    IGHD3-10*01  16   ....-------------------------------------------------------------------------------------  19
J  93.9% (46/49)    IGHJ6*02     14   ----------------------------------------.....G.A.......................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_300382

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           316     2e-88
IGHD3-10*01                                                                                           10.3    115  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGA	CTTCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGACTTCAGGCCTTTGACTCC	ARGGLQAFDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  G  G  F  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_5702   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAACAGTGGTGGATTCTACTGGACTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  90.4% (226/250)  IGHV4-31*03  49   .......................C................G.........T.A........GC...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  Y  T  G  H  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  L  D  T  S 
                    Query_5702   91   CTAGAGTGGATTGGTTACATCTTTTACACTGGACACACCTACTACAATCCGTCCCTCAGGAGTCGACTTACCATTTCACTGGACACATCT  180
V  90.4% (226/250)  IGHV4-31*03  139  ..G...........G.......A.....G...GAG............C..........A.......G.......A...G.A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       E  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  L  Q  A  F  D 
                    Query_5702   181  GAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGGGGACTTCAGGCCTTTGAC  270
V  90.4% (226/250)  IGHV4-31*03  229  A...................G.....C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------.....---------------  20
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5702   271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.7% (43/44)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_300385

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           422     2e-120
IGHD2-8*02                                                                                            14.1    9.8   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GTGAGGATTTCTTTGATG	CTGGTGG	GTCCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGAGGATTTCTTTGATGCTGGTGGGTCCCACTACTACGGCTTGGACGTC	ARREDFFDAGGSHYYGLDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  P  K  I  S  C  K  G  S  G  Y  N  F  A  A  F
                    Query_5703   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCCGAAGATCTCCTGTAAGGGTTCTGGATACAACTTTGCCGCCTT  90
V  96.6% (280/290)  IGHV5-51*01  6    ...............................................T.............................G....A..AG..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_5703   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCCGGTGACTCTGATACCAGATACAGCCC  180
V  96.6% (280/290)  IGHV5-51*01  96   ...............................................................T..........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  A  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  R  A  S  D  T  A
                    Query_5703   181  GTCCTTCCAAGGCCAGGTCGCCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACACCGC  270
V  96.6% (280/290)  IGHV5-51*01  186  ...................A....C.................................................A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  R  E  D  F  F  D  A  G  G  S  H  Y  Y  G  L  D  V  W  G  Q  G  T  T  V
                    Query_5703   271  CATGTATTACTGTGCGAGACGTGAGGATTTCTTTGATGCTGGTGGGTCCCACTACTACGGCTTGGACGTCTGGGGCCAAGGGACCACGGT  360
V  96.6% (280/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-8*02   12   --------------------------------------.......---------------------------------------------  18
J  94.3% (50/53)    IGHJ6*02     10   --------------------------------------------------..........TA............................  49

                                                   
                                        T  V  S  S 
                    Query_5703   361  CACCGTCTCTTCA  373
J  94.3% (50/53)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_300384

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD3-16*01                                                                                           10.3    117  
IGHJ6*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGG	GGTAAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGGTAATTACTACTACGCTTTGGACGTC	ARGGGNYYYALDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5704   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATAACTAATTATTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   ...............................G......C.G..G...C........C........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  F  Y  S  G  I  T  S  Y  T  P  S  L  Q  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_5704   91   TGGATTGGCTATATGTTTTACAGTGGGATCACCAGCTACACCCCCTCCCTCCAGAGTCGAGTCACCATGTCAGTCGACACGTCCAAGAAG  180
V  91.4% (223/244)  IGHV4-59*01  139  ........G.....C.A...........G.....A.....A..........A................A.....A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  I  S  L  E  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  N  Y  Y  Y  A  L 
                    Query_5704   181  CAGATCTCCCTGGAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGGGGGGGGTAATTACTACTACGCTTTG  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T........A......G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   ----------------------------------------------------------------.....---------------------  22
J  96.3% (52/54)    IGHJ6*02     9    ---------------------------------------------------------------------------..........G.A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5704   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  96.3% (52/54)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_300387

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAGGGAGT	AGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCC	ARAGSSGWLDS	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  D  Y  W  S  W  I  R  K  P  P  G  K  G  L  E 
                    Query_5705   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATAACTAGTGACTACTGGAGCTGGATCCGGAAGCCCCCTGGGAAGGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*01  49   .............................T........C.G....T....................C.......A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  D  Y  N  S  S  L  K  S  R  V  T  I  S  F  D  R  S  K  N 
                    Query_5705   91   TGGATTGGATATATCTATTACAGTGGGAGCACCGACTACAATTCCTCCCTCAAGAGTCGAGTCACCATATCATTTGACAGGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*01  139  ........G........................A.......CC.............................G.A....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  S  S  G  W  L  D  S 
                    Query_5705   181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCC  270
V  93.0% (227/244)  IGHV4-59*01  229  ...............C....C..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-19*01  10   ------------------------------------------------------------------------.........---------  18
J  97.5% (39/40)    IGHJ4*02     7    ----------------------------------------------------------------------------------......A.  14

                                                                      
                                       W  G  Q  G  T  L  V  T  V  S  S
                    Query_5705   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  302
J  97.5% (39/40)    IGHJ4*02     15   ................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_300386

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD5-18*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGCCATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGCCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	240	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_5706   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAAAGACTGGAG  90
V  98.8% (240/243)  IGHV4-59*01  49   .........................................T......................................GG........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5706   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (240/243)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D 
                    Query_5706   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGCCATGGTTACGGAGGAGTTGAC  270
V  98.8% (240/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD5-18*01  6    ---------------------------------------------------------------......T........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5706   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_308154

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*07                                                                                           347     7e-98
IGHD1-7*01                                                                                            25.7    0.003
IGHJ3*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*07	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCACA	ACT	TATAACTGGAACT	TGAATGGTGTCA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAACTTATAACTGGAACTTGAATGGTGTCAATGCTTTTGATATC	TTTYNWNLNGVNAFDI	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	254	6	6	0	0	100
Total	N/A	N/A	254	238	16	0	93.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  N  F  S  N  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5707   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCAATTTCAGTAACGCCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.7% (238/254)  IGHV3-15*07  47   .......T.......................TT...C.....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  G  K  S  D  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_5707   91   AGTGGGTCGGCCGTATTAAAGGGAAAAGTGATGGTGAGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATTTCAAGAGATG  180
V  93.7% (238/254)  IGHV3-15*07  137  ....................A.C....C........G..........................................C..........  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  A  K  D  T  V  Y  L  Q  M  S  S  L  K  T  E  D  T  A  V  Y  H  C  T  T  T  Y  N  W  N  
                    Query_5707   181  ATGCAAAAGACACAGTGTATCTTCAAATGAGCAGCCTGAAAACCGAGGACACAGCCGTGTATCACTGTACCACAACTTATAACTGGAACT  270
V  93.7% (238/254)  IGHV3-15*07  227  ..T.....A....GC.......G.......A...............................T...........----------------  300
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (13/13)   IGHD1-7*01   3    -----------------------------------------------------------------------------.............  15

                                      R3-IMGT------------------>                                  
                                      L  N  G  V  N  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5707   271  TGAATGGTGTCAATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  330
J  100.0% (48/48)   IGHJ3*02     3    ------------................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_308155

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            347     7e-98
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	ACAGGGGAAGTATTT	TGATAGGAGTGGTTATT	TACGAGGG	GCTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGAACAGGGGAAGTATTTTGATAGGAGTGGTTATTTACGAGGGGCTCTTGATACC	AKEQGKYFDRSGYLRGALDT	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  D  E  Y  V  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5708   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATGTTTGATGAGTATGTCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  94.4% (236/250)  IGHV3-9*01   47   ....................................CC........T....C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  S  N  S  G  H  I  G  Y  A  D  S  V  K  G  R  F  T  M  Y  R  D  N  G  
                    Query_5708   91   AGTGGGTCTCCGCTATTAGTTCGAATAGTGGTCACATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATGTACAGAGACAACGGCA  180
V  94.4% (236/250)  IGHV3-9*01   137  ..........A.G........G..........AG.......................................C.C...........C..  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  E  Q  G  K  Y  F  D  
                    Query_5708   181  AGAACTCCCTGTACTTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGAACAGGGGAAGTATTTTGATA  270
V  94.4% (236/250)  IGHV3-9*01   227  .............TC.......................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  94.1% (16/17)    IGHD3-22*01  10   -------------------------------------------------------------------------------------.....  14

                                      R3-IMGT------------------------>                                  
                                      R  S  G  Y  L  R  G  A  L  D  T  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_5708   271  GGAGTGGTTATTTACGAGGGGCTCTTGATACCTGGGGCCAAGGGACAATGGTCATCGTCTCTTCAG  336
D  94.1% (16/17)    IGHD3-22*01  15   .T..........------------------------------------------------------  26
J  93.5% (43/46)    IGHJ3*02     5    --------------------...T......T.......................C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_308156

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           350     8e-99
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAAC	TATTACTATGGTTCGGGG	GCCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAACTATTACTATGGTTCGGGGGCCCACTTTGACTAC	ARGNYYYGSGAHFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  F  R  D  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5709   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATATTCAGAGATGGTTACTACTGGAGCTGGATCCGCCAACACCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*01  49   ......................................CAG...T.G...........................G...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 
                    Query_5709   91   CTGGAGTGGATTGGGTTCATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACCTCT  180
V  94.8% (237/250)  IGHV4-31*01  139  ................A.....................................................................G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  R  F  S  L  K  L  T  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  N  Y  Y  Y  G  S 
                    Query_5709   181  AAGAACCGGTTCTCCCTGAAGTTGACTTCTGCGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGAACTATTACTATGGTTCG  270
V  94.8% (237/250)  IGHV4-31*01  229  .......A.............C...GC....T......................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (18/18)   IGHD3-10*01  2    ---------------------------------------------------------------------------...............  16

                                      ----------------->                                  
                                       G  A  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5709   271  GGGGCCCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (18/18)   IGHD3-10*01  17   ...-------------------------------------------------  19
J  100.0% (45/45)   IGHJ4*02     4    -------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_308150

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_5710   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AGT.A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S 
                    Query_5710   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T.A....A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_5710   181  CAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ..............G.....C..................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5710   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_308151

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-3*01                                                                                            10.3    123   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCTC	TTTTT	CTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTTTTTCTCCAAGAAAGAGTCTACTACTTGGACTAC	ARSSLFLQERVYYLDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  K  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5711   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAAGAGTGGTGGCTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (239/248)  IGHV4-31*03  49   ..................................C.....GC........T.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  A  T  S 
                    Query_5711   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGCCACGTCT  180
V  96.4% (239/248)  IGHV4-31*03  139  ..................................G.............C......................C........A.A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  L  Q  E 
                    Query_5711   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTTCTCTTTTTCTCCAAGAA  270
V  96.4% (239/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD3-3*01   10   ----------------------------------------------------------------------------.....---------  14

                                      GT------------------>                                  
                                       R  V  Y  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  T  S  
                    Query_5711   271  AGAGTCTACTACTTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCACCTCAG  325
J  95.8% (46/48)    IGHJ4*02     1    -------.......T.................................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_308152

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            364     5e-103
IGHD3-3*01                                                                                            27.6    8e-04 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGGGGACTTCGGA	ATTTTTGGAGTGGT	GCATACCTAGGGGC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGGGGACTTCGGAATTTTTGGAGTGGTGCATACCTAGGGGCTATGGACGTC	ARVGGLRNFWSGAYLGAMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  R  L  T  F  S  S  D  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5712  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTCGATTAACGTTTAGTAGTGATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-7*03  47   .............................G....C..C........CT..........................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5712  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAGTACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (241/249)  IGHV3-7*03  137  .....................................A....................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------------CD
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  G  L  R  N  F  
                    Query_5712  181  AGAACTCACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAGAGTAGGGGGACTTCGGAATTTTT  270
V  96.8% (241/249)  IGHV3-7*03  227  ............................C.......................G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD3-3*01  9    ------------------------------------------------------------------------------------......  14

                                     R3-IMGT------------------------>                                 
                                     W  S  G  A  Y  L  G  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5712  271  GGAGTGGTGCATACCTAGGGGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  100.0% (14/14)   IGHD3-3*01  15   ........---------------------------------------------------------  22
J  100.0% (43/43)   IGHJ6*02    20   ----------------------...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_308153

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           360     1e-101
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGGTCC	ATTACTATGATAGTA	CGTCTTACTACGGGAGTCGGTTCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGGTCCATTACTATGATAGTACGTCTTACTACGGGAGTCGGTTCCACTTTGACTAC	ARVVHYYDSTSYYGSRFHFDY	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G 
                    Query_5713   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGA  90
V  96.4% (239/248)  IGHV4-61*01  49   .........................................C........................A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_5713   91   CTGGAGTGGATTGGGTACATCTATTACAGAGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTGGACACGTCC  180
V  96.4% (239/248)  IGHV4-61*01  139  .................T...........T....G.......................................A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  V  H  Y  Y  D  S 
                    Query_5713   181  AAGAACCAGTTCTCCCTGCAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGGTGGTCCATTACTATGATAGT  270
V  96.4% (239/248)  IGHV4-61*01  229  ..................A..C..............................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (15/15)   IGHD3-22*01  3    ----------------------------------------------------------------------------..............  16

                                      CDR3-IMGT-------------------------->                                  
                                       T  S  Y  Y  G  S  R  F  H  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_5713   271  ACGTCTTACTACGGGAGTCGGTTCCACTTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  340
D  100.0% (15/15)   IGHD3-22*01  17   .---------------------------------------------------------------------  17
J  97.8% (44/45)    IGHJ4*02     4    -------------------------.......................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_308158

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           319     2e-89
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	AGTGGC	TACTATGACACTAGTGGT	GACACTCC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGTGGCTACTATGACACTAGTGGTGACACTCCCAACTGGTTCGACCCC	SGYYDTSGDTPNWFDP	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	108	6	0	94.7
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  R  R  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_5714   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCGTCAGCCGTCGTAATTACTATTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  92.1% (223/242)  IGHV4-61*01  50   .....TCC...A....C........................A..G...G......C.....C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  R  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  
                    Query_5714   94   TGGAGTGGATTGGATATATCTATTACCGTGGGACCACCAACTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCCA  183
V  92.1% (223/242)  IGHV4-61*01  140  .............G............A......G............C..............................G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  T  Y  Y  C  S  G  Y  Y  D  T  S  G  D  
                    Query_5714   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCGGCGGACACGGCCACTTATTACTGTAGTGGCTACTATGACACTAGTGGTGACA  273
V  92.1% (223/242)  IGHV4-61*01  230  .....................................T............GTG.........----------------------------  291
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                             
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------........T.G.......----  22

                                      T------------------>                                  
                                      T  P  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5714   274  CTCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (50/50)   IGHJ5*02     2    ----..................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_308159

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           371     7e-105
IGHD3-22*01                                                                                           33.4    1e-05 
IGHJ3*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGGGGAC	ATTACTATGATAGTAGT	AATCAATTCGTCCGAGAAGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGACATTACTATGATAGTAGTAATCAATTCGTCCGAGAAGGTTTTGATATC	ARRGHYYDSSNQFVREGFDI	242	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	28	26	26	0	0	100
CDR1-IMGT	29	52	24	24	0	0	100
FR2-IMGT	53	103	51	51	0	0	100
CDR2-IMGT	104	127	24	22	2	0	91.7
FR3-IMGT	128	241	114	112	2	0	98.2
CDR3-IMGT (germline)	242	247	6	6	0	0	100
Total	N/A	N/A	245	241	4	0	98.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  
                    Query_5715   3    CCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  92
V  98.4% (241/245)  IGHV3-11*06  50   ..........................................................................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  Y  I  S  S  S  S  T  Y  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  E  N  A  K  
                    Query_5715   93   GGGTTTCATACATTAGTAGTAGTAGTACTTACATAAACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGAGAACGCCAAGA  182
V  98.4% (241/245)  IGHV3-11*06  140  ...........................G.....C.............................................C..........  229
                                      W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><-------------------------CDR3-
                                      N  S  L  Y  L  H  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  R  G  H  Y  Y  D  S  S  
                    Query_5715   183  ACTCACTGTATCTGCACATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGACGGGGACATTACTATGATAGTAGTA  272
V  98.4% (241/245)  IGHV3-11*06  230  ................A................................................-------------------------  294
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (17/17)   IGHD3-22*01  3    ------------------------------------------------------------------------.................-  19

                                      IMGT------------------------>                                  
                                      N  Q  F  V  R  E  G  F  D  I  W  G  Q  G  T  M  V  P  V  S  S  
                    Query_5715   273  ATCAATTCGTCCGAGAAGGTTTTGATATCTGGGGCCAAGGGACAATGGTCCCCGTCTCCTCAG  335
J  95.5% (42/44)    IGHJ3*02     7    -------------------...............................A.......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_189984

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           391     6e-111
IGHD3-3*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	GGAGAGTCTG	CGATTTCTGGAGTGGTTAT	CCCCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTAC	AREESLRFLEWLSPDY	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	71	4	0	94.7
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	298	8	7	1	0	87.5
Total	N/A	N/A	296	273	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  L  T 
                    Query_5716   3    CAGGTCCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCGGTAAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTGACC  92
V  92.2% (273/296)  IGHV1-18*01  1    .....T............................................A..G.................T..............T...  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  S  M  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  S  N  I  N  Y 
                    Query_5716   93   AGATATAGTATGTCTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATAGCAACATAAATTAT  182
V  92.2% (273/296)  IGHV1-18*01  91   ..C...G....CAGC....................................................C.......G.T....C...C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  L  L  G  R  V  T  M  T  I  D  T  S  A  N  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_5716   183  GCACAGAAACTCCTGGGCAGAGTCACCATGACCATAGACACATCCGCGAACACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  272
V  92.2% (273/296)  IGHV1-18*01  181  ........G....A....................C..........A...G........................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  E  E  S  L  R  F  L  E  W  L  S  P  D  Y  W  G  Q  G  T  L  V  I 
                    Query_5716   273  ACGGCCGTGTATTATTGTGCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTACTGGGGCCAGGGAACCCTGGTCATC  362
V  92.2% (273/296)  IGHV1-18*01  271  ..............C........A..----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.7% (18/19)    IGHD3-3*01   7    ------------------------------------......T............-----------------------------------  25
J  97.1% (34/35)    IGHJ4*02     9    ------------------------------------------------------------............................C.  38

                                           
                                       V  S
                    Query_5716   363  GTCTC  367
J  97.1% (34/35)    IGHJ4*02     39   .....  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_271140

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD2-2*02                                                                                            12.2    32    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCA	CTGGTATAC	TTACGTCAGCGGGGGATATG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTGGTATACTTACGTCAGCGGGGGATATGTTGACTAC	ARGHWYTYVSGGYVDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5717   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S 
                    Query_5717   91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGCTACCATATCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ................A.................G................................T......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  W  Y  T  Y  V 
                    Query_5717   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCACTGGTATACTTACGTC  270
V  97.6% (244/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (8/9)      IGHD2-2*02   22   --------------------------------------------------------------------------...C.....-------  30

                                      GT------------------>                                  
                                       S  G  G  Y  V  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_5717   271  AGCGGGGGATATGTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  325
J  97.6% (41/42)    IGHJ4*02     7    -------------.............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_271141

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           311     4e-87
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGCCCTACTTATTATGCCAA	TAGTGGTT	CAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCCCTACTTATTATGCCAATAGTGGTTCAGACTTTGACTAC	ARGGPTYYANSGSDFDY	235	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	11	1	0	91.7
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	120	21	17	4	0	81
FR3-IMGT	121	234	114	107	7	0	93.9
CDR3-IMGT (germline)	235	241	7	7	0	0	100
Total	N/A	N/A	229	214	15	0	93.4


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  V  S  S  Y  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I 
                    Query_5718   13   TGTGCAGCCTCCGGGTTCACCGTCAGCAGCTACTACATGAGCTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATT  102
V  93.4% (214/229)  IGHV3-53*01  64   ...........T..............T...A.........................T.................................  153
                                       C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I 

                                      ---CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-----------
                                       H  S  A  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  N  L  Q 
                    Query_5718   103  CATAGCGCTGGAAGTACATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTAAATCTTCAA  192
V  93.4% (214/229)  IGHV3-53*01  154  T......G...T..C.....C..C........................................................GT........  243
                                       Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 

                                      -----------------------------------------><--------------------CDR3-IMGT------------------
                                       M  N  S  L  R  V  Q  D  T  A  V  Y  Y  C  A  R  G  G  P  T  Y  Y  A  N  S  G  S  D  F  D 
                    Query_5718   193  ATGAACAGCCTGAGAGTCCAGGACACGGCCGTGTATTATTGTGCGAGAGGAGGCCCTACTTATTATGCCAATAGTGGTTCAGACTTTGAC  282
V  93.4% (214/229)  IGHV3-53*01  244  ................C.G...................C..........-----------------------------------------  292
                                       M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                           
D  100.0% (8/8)     IGHD3-22*01  16   -----------------------------------------------------------------------........-----------  23
J  100.0% (45/45)   IGHJ4*02     4    ----------------------------------------------------------------------------------........  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5718   283  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (45/45)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_271142

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           316     2e-88
IGHD2-8*02                                                                                            12.2    30   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTGGGCCGTTGGCC	TACTGG	GTCT	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	49	2	0	96.1
CDR2-IMGT	101	121	21	17	4	0	81
FR3-IMGT	122	235	114	109	5	0	95.6
CDR3-IMGT (germline)	236	243	8	8	0	0	100
Total	N/A	N/A	230	216	14	0	93.9


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  V  S  T  N  H  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  I  I 
                    Query_5719   14   TGTGCAGCCTCTGGATTCACCGTCAGTACCAACCACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAATTATT  103
V  93.9% (216/230)  IGHV3-53*01  64   ..............G.............G....T......G...........................................G.....  153
                                       C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I 

                                      ---CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-----------
                                       F  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  K  N  T  L  Y  L  Q 
                    Query_5719   104  TTTAGTGGTGGAAGTACATACTACGCAGACTCCGTGAAGGGCCGATTCTCCATCTCCAGAGACAATTCCAAAAACACACTATATCTTCAA  193
V  93.9% (216/230)  IGHV3-53*01  154  .A...C.....T..C.................................A......................G.....G..G.........  243
                                       Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 

                                      ----------------------------------------->                                                
                                       M  N  S  L  R  A  E  D  T  A  M  Y  Y  C  A  R  D  W  A  V  G  L  L  G  L  G  Q  G  T  L 
                    Query_5719   194  ATGAACAGCCTGAGAGCCGAGGACACGGCCATGTATTACTGTGCGAGAGATTGGGCCGTTGGCCTACTGGGTCTGGGCCAGGGAACCCTG  283
V  93.9% (216/230)  IGHV3-53*01  244  ..............................G...................----------------------------------------  293
                                       M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                           
D  100.0% (6/6)     IGHD2-8*02   10   ----------------------------------------------------------------......--------------------  15
J  100.0% (32/32)   IGHJ4*02     17   --------------------------------------------------------------------------................  32

                                                      
                                       V  T  V  S  S  
                    Query_5719   284  GTCACCGTCTCCTCAG  299
J  100.0% (32/32)   IGHJ4*02     33   ................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_271143

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*03                                                                                           308     4e-86
IGHD4-17*01                                                                                           12.2    31   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*03	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	TG	CGGTGA	AG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGTGCGGTGAAGTACTACTACTACGCTTTGGACGTC	ASAVKYYYYALDV	239	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	48	3	0	94.1
CDR2-IMGT	101	124	24	21	3	0	87.5
FR3-IMGT	125	238	114	105	9	0	92.1
CDR3-IMGT (germline)	239	243	5	5	0	0	100
Total	N/A	N/A	229	213	16	0	93


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  S  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  R  I  
                    Query_5720   15   GTGCAGCCTCTGGATCCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGAATGGGTCTCGCGTATTA  104
V  93.0% (213/229)  IGHV3-74*03  65   ...............T........................................................TG........A.......  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  G  D  G  S  D  T  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  E  N  T  L  Y  L  
                    Query_5720   105  ATGGTGATGGGAGTGACACAGCTTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCGAGAACACCCTTTATCTGC  194
V  93.0% (213/229)  IGHV3-74*03  155  ..A...........AG....A.G................................................A.......G..G.......  244
                                      N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------CDR3-IMGT-------------->       
                                      Q  V  N  G  L  R  A  D  D  T  A  V  Y  Y  C  A  S  A  V  K  Y  Y  Y  Y  A  L  D  V  W  G  
                    Query_5720   195  AAGTGAACGGTCTGAGAGCCGATGACACGGCTGTGTATTATTGTGCAAGTGCGGTGAAGTACTACTACTACGCTTTGGACGTCTGGGGCC  284
V  93.0% (213/229)  IGHV3-74*03  245  ..A.....A.............G.................C........-----------------------------------------  293
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (6/6)     IGHD4-17*01  7    ---------------------------------------------------......---------------------------------  12
J  93.0% (53/57)    IGHJ6*02     6    -----------------------------------------------------------.............G.A...............  36

                                                                
                                      Q  G  T  T  V  T  V  S  S 
                    Query_5720   285  AGGGGACCACAGTCACCGTCTCCTCA  310
J  93.0% (53/57)    IGHJ6*02     37   .A........G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_27914

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            290     2e-80
IGHD1-26*01                                                                                           10.3    117  
IGHJ6*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACTTTCGCTTCGC	ACTAC	CTACATT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACTTTCGCTTCGCACTACCTACATTTGGACGTC	ARTFASHYLHLDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	245	217	25	3	88.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T     N  Q  W  W  T  W  V  R  Q  P  P  G  R  G  L 
                    Query_5721   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAC---TAATCAGTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAGGGGGCTG  87
V  88.6% (217/245)  IGHV4-4*01   49   ........................................GCAG..G.A.C.......G.......................A.......  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  F  P  N  G  N  T  N  Y  S  P  S  L  K  S  R  L  T  I  S  M  A  K  S  K 
                    Query_5721   88   GAGTGGATTGGGGAAATTTTTCCTAATGGAAACACCAACTACAGCCCGTCCCTCAAGAGTCGACTCACCATTTCAATGGCTAAGTCCAAG  177
V  88.6% (217/245)  IGHV4-4*01   139  .................C.A..A..G...G.G...........A...................G.......A...G.A.AC.........  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  V  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  T  F  A  S  H  Y  L  H 
                    Query_5721   178  AACCAGGTCTCCCTGAAACTTAACTCTGTGACGGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGACTTTCGCTTCGCACTACCTACAT  267
V  88.6% (217/245)  IGHV4-4*01   229  ......T..........G..G.G.........C......................G.........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  100.0% (5/5)     IGHD1-26*01  16   -------------------------------------------------------------------------------.....------  20

                                      -------->                              
                                       L  D  V  W  G  Q  G  A  T  V  S  V  S 
                    Query_5721   268  TTGGACGTCTGGGGCCAAGGGGCCACGGTCAGCGTCTCC  306
J  94.7% (36/38)    IGHJ6*02     22   -....................A.........C.......  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_271146

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           452     3e-129
IGHD6-13*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAC	ATAGCAGCAGCTGGT	CGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTAC	ARSHSSSWSGFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	289	0	0	100


Alignments

                                       <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                     Query_5722   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  100.0% (289/289)  IGHV5-51*03  6    ..........................................................................................  95
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                       ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                         W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                     Query_5722   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  100.0% (289/289)  IGHV5-51*03  96   ..........................................................................................  185
                                         W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                       ------------------------------------------FR3-IMGT----------------------------------------
                                         S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                     Query_5722   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  100.0% (289/289)  IGHV5-51*03  186  ..........................................................................................  275
                                         S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                       ------------><--------------CDR3-IMGT-------------->                                  
                                         M  Y  Y  C  A  R  S  H  S  S  S  W  S  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_5722   271  CATGTATTACTGTGCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  100.0% (289/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                         M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)    IGHD6-13*01  5    -----------------------...............------------------------------------------------  19
J  100.0% (44/44)    IGHJ4*02     5    ------------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_271147

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           347     7e-98
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAAA	AATATCTACGAGGCGAGTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAAATATCTACGAGGCGAGTCATCAATATAGTGGCTACATGATTAATGACTCC	GKNIYEASHQYSGYMINDS	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5723   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTACCTTTAGCAGATATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-23*01  47   ..................................C...........C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  G  I  S  E  S  G  G  S  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5723   91   ATTGGGTCTCAGGTATTAGTGAAAGTGGTGGTAGCACAAACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  94.8% (235/248)  IGHV3-23*01  137  .G..........C........GT...............T...............................................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  I  S  L  R  A  E  D  T  A  V  Y  Y  C  G  K  N  I  Y  E  A  S  H  
                    Query_5723   181  AGAACACCCTGTATCTACAAATGATCAGCCTCAGAGCCGAGGACACGGCCGTATATTACTGTGGGAAAAATATCTACGAGGCGAGTCATC  270
V  94.8% (235/248)  IGHV3-23*01  227  .......G........G.......A......G...............................C....----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  S  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_5723   271  AATATAGTGGCTACATGATTAATGACTCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  95.1% (39/41)    IGHJ4*02     8    ----------------------.....A.......................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_271149

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           364     5e-103
IGHD7-27*01                                                                                           14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGTATCGACT	CTGGGGA	N/A	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGTATCGACTCTGGGGAACAACTGGTTCGACCCC	ARQVSTLGNNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	239	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  R  D  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5724   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCGTGACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.6% (239/245)  IGHV4-59*08  49   ..........................................A..T............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_5724   91   TGGATTGGGTATATCTATTACAGTGGGAACACCTACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  97.6% (239/245)  IGHV4-59*08  139  ............................G....A.............................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  V  S  T  L  G  N  N  W 
                    Query_5724   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACAAGTATCGACTCTGGGGAACAACTGG  270
V  97.6% (239/245)  IGHV4-59*08  229  ...............C.................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD7-27*01  5    ---------------------------------------------------------------------------.......--------  11
J  100.0% (51/51)   IGHJ5*02     1    ----------------------------------------------------------------------------------........  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5724   271  TTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (51/51)   IGHJ5*02     9    ...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_330888

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_5725   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_5725   91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_5725   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_5725   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_183108

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            316     2e-88
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CT	TATTGTAGTAGTAGCATCTGCTA	CCA	TGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTTATTGTAGTAGTAGCATCTGCTACCATGACCAC	ATYCSSSICYHDH	230	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	108	6	0	94.7
CDR3-IMGT (germline)	230	233	4	4	0	0	100
Total	N/A	N/A	220	211	9	0	95.9


Alignments

                                     <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                      S  G  V  T  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  K  H  D 
                    Query_5726  14   TCTGGAGTCACCTTTAGTACCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCACGAT  103
V  95.9% (211/220)  IGHV3-7*01  73   ......T............G..................................................................A...  162
                                      S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  K  Q  D 

                                     -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                      G  S  E  K  Y  Y  A  D  S  V  K  G  R  F  A  I  S  R  D  N  A  K  N  S  L  F  L  Q  M  S 
                    Query_5726  104  GGAAGTGAGAAATACTATGCGGACTCTGTGAAGGGCCGATTCGCCATCTCCAGAGACAACGCCAAGAACTCACTGTTTCTGCAAATGAGT  193
V  95.9% (211/220)  IGHV3-7*01  163  ...................T......................A.................................A...........AC  252
                                      G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                     -----------------------------------><--------------CDR3-IMGT-------------->               
                                      S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  Y  C  S  S  S  I  C  Y  H  D  H  W  G  Q  G  I 
                    Query_5726  194  AGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGACTTATTGTAGTAGTAGCATCTGCTACCATGACCACTGGGGCCAGGGAATC  283
V  95.9% (211/220)  IGHV3-7*01  253  ..........................G.............--------------------------------------------------  292
                                      S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                    
D  91.3% (21/23)    IGHD2-2*01  5    ------------------------------------------.............C..G......-------------------------  27
J  95.1% (39/41)    IGHJ4*02    8    --------------------------------------------------------------------....T...............C.  29

                                                        
                                      L  V  T  V  S  S  
                    Query_5726  284  CTGGTCACCGTCTCCTCAG  302
J  95.1% (39/41)    IGHJ4*02    30   ...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_330881

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            405     3e-115
IGHD3-10*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGAC	TGGTTCGGGGA	CTT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTAC	ARVTGSGTYSFDY	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	74	1	0	98.7
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	102	12	0	89.5
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	277	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  G 
                    Query_5727   1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCGGC  90
V  93.9% (277/295)  IGHV1-8*02   1    .......................G...............................................................AC.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  D  Y 
                    Query_5727   91   AGCTATGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATGAATCCTAACAGTGGGAACACAGACTAT  180
V  93.9% (277/295)  IGHV1-8*02   91   ..............................A..................................C...........T.......G....  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  Y  M  E  L  S  S  L  G  S  A  D 
                    Query_5727   181  GCACAGAAGTTCCGGGGCAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCTACATGGAGCTGAGTAGTCTGGGATCTGCCGAC  270
V  93.9% (277/295)  IGHV1-8*02   181  .............A.......................A...C..C.T........................C..C...A......AG...  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  Y  C  A  R  V  T  G  S  G  T  Y  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_5727   271  ACGGCCGTCTATTACTGTGCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  360
V  93.9% (277/295)  IGHV1-8*02   271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (11/11)   IGHD3-10*01  10   -----------------------------...........--------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    -------------------------------------------...A......C....................................  47

                                       
                                       
                    Query_5727   361  G  361
J  95.8% (46/48)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_183106

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           10.3    117  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAGGTTTCGATA	GGGGG	G	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAGGTTTCGATAGGGGGGGGTTCGACCCC	ARDRGFDRGGFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5728   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A......A..............................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  Y  Y  S  G  S  I  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  M  P  K  N 
                    Query_5728   91   TGGATTGCGTATATCTATTACAGTGGGAGCATCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACATGCCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  .......G.......................C...C.....................................T.....C.T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  I  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  G  F  D  R  G  G  F 
                    Query_5728   181  CAGATCTCCCTGAAGTTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATAGAGGTTTCGATAGGGGGGGGTTC  270
V  95.1% (233/245)  IGHV4-59*01  229  ...T...........C................T................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -------------------------------------------------------------------------------.....------  22
J  100.0% (45/45)   IGHJ5*02     7    -------------------------------------------------------------------------------------.....  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5728   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (45/45)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_330882

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	226	15	0	93.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_5729   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAGT  93
V  93.8% (226/241)  IGHV4-59*01  50   .....TCC...A.............................AG..............................A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_5729   94   GGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  93.8% (226/241)  IGHV4-59*01  140  ...............AT........G.G..............................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W  
                    Query_5729   184  AGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGC  273
V  93.8% (226/241)  IGHV4-59*01  230  ............A......C.........G................G..............-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  93.3% (14/15)    IGHD3-10*01  11   -----------------------------------------------------------------..........G....----------  25
J  97.9% (46/47)    IGHJ5*02     5    -------------------------------------------------------------------------------------....T  9

                                      ------->                                  
                                      L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5729   274  TCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.9% (46/47)    IGHJ5*02     10   ..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_330885

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           37.2    9e-07
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GTCTT	CTATGATAGCAGTGGTTATTAC	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTCTTCTATGATAGCAGTGGTTATTACCACTTTGACTAT	AVFYDSSGYYHFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	227	13	0	94.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  A  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5730   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGCCGCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  94.6% (227/240)  IGHV4-59*01  49   .......................C.......G.T........................................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5730   91   TGGATTGGTTATATCTATCACAGTGGGACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  94.6% (227/240)  IGHV4-59*01  139  ........G.........T.........G...............C.............................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  V  F  Y  D  S  S  G  Y  Y  H 
                    Query_5730   181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGCGGTCTTCTATGATAGCAGTGGTTATTACCAC  270
V  94.6% (227/240)  IGHV4-59*01  229  ...................GC..........................G..T.........------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.5% (21/22)    IGHD3-22*01  7    -----------------------------------------------------------------.........T............---  28
J  95.6% (43/45)    IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_5730   271  TTTGACTATTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  313
J  95.6% (43/45)    IGHJ4*02     6    ........C.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_183101

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           353     1e-99
IGHD6-25*01                                                                                           12.2    35   
IGHJ3*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-25*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACT	CGGCTA	AGGTATCGC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTCGGCTAAGGTATCGCTTTGACATA	ATTRLRYRFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	286	256	30	0	89.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  P  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T  S  Y 
                    Query_5731   2    CAGCTGGTGCAGTCTGGACCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCATGTAAGGCTTCTGGATATATCTTCACCAGTTAT  91
V  89.5% (256/286)  IGHV1-18*01  7    ..................G.....................................C..C...........T..C.C...T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  T  P  G  E  G  L  E  W  M  G  W  I  S  T  Y  H  E  N  T  E  Y  S  Q 
                    Query_5731   92   GGCATTAGTTGGGTGCGACAGACCCCTGGAGAAGGGCTTGAGTGGATGGGATGGATCAGCACTTACCATGAAAACACAGAGTATTCACAG  181
V  89.5% (256/286)  IGHV1-18*01  97   ..T..C..C............G........C.............................G.....A...GT......A.C...G.....  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  I  T  A  D  T  S  T  S  T  A  Y  M  E  L  R  G  L  R  S  D  D  T  A 
                    Query_5731   182  AAGTTGCAGGGCAGAGTCACCATTACCGCAGACACATCCACGAGTACAGCCTACATGGAGTTGAGGGGCCTCAGATCTGACGACACGGCC  271
V  89.5% (256/286)  IGHV1-18*01  187  ...C.C.................G...A................C...............C.....A....G..................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       L  Y  F  C  A  T  T  R  L  R  Y  R  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5731   272  CTGTATTTCTGTGCGACGACTCGGCTAAGGTATCGCTTTGACATATGGGGCCAAGGGACAATGGTCACCGTCTCCTCAG  350
V  89.5% (256/286)  IGHV1-18*01  277  G......A........---------------------------------------------------------------  292
                                       V  Y  Y  C  A                                                                 
D  100.0% (6/6)     IGHD6-25*01  12   ---------------------......----------------------------------------------------  17
J  93.0% (40/43)    IGHJ3*02     8    ------------------------------------.....T..C.............................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_330887

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	226	15	0	93.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_5732   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAGT  93
V  93.8% (226/241)  IGHV4-59*01  50   .....TCC...A.............................AG..............................A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_5732   94   GGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  93.8% (226/241)  IGHV4-59*01  140  ...............AT........G.G..............................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W  
                    Query_5732   184  AGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGC  273
V  93.8% (226/241)  IGHV4-59*01  230  ............A......C.........G................G..............-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  93.3% (14/15)    IGHD3-10*01  11   -----------------------------------------------------------------..........G....----------  25
J  97.9% (46/47)    IGHJ5*02     5    -------------------------------------------------------------------------------------....T  9

                                      ------->                                  
                                      L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5732   274  TCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.9% (46/47)    IGHJ5*02     10   ..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_305405

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            329     3e-92
IGHD1-7*01                                                                                            14.1    8.4  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TAAAAGACTACACA	AACTGGTACT	TCC	TTGCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGATATAAAAGACTACACAAACTGGTACTTCCTTGCCTAT	TRDIKDYTNWYFLAY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	252	10	8	2	0	80
Total	N/A	N/A	252	231	21	0	91.7


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  S  F  D  A  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5733  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTGATGCTTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  91.7% (231/252)  IGHV3-9*01  47   ....................................C........A............................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  I  S  W  T  G  G  S  I  G  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  A  
                    Query_5733  91   AGTGGGTCTCAGGCATTAGTTGGACTGGTGGTAGTATTGGCTATGCGGACTCTGTGCAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.7% (231/252)  IGHV3-9*01  137  .............T..........A.A.......C..A..................A.................................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                     K  S  L  L  F  L  E  M  R  S  L  R  P  E  D  T  A  L  Y  F  C  T  R  D  I  K  D  Y  T  N  
                    Query_5733  181  AGAGTCTCCTATTTCTGGAAATGAGAAGTCTGAGACCTGAGGACACGGCCTTGTATTTCTGTACAAGAGATATAAAAGACTACACAAACT  270
V  91.7% (231/252)  IGHV3-9*01  227  ...ACTC...G.A....C......AC.........G.....................A....G...A.....------------------  298
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  90.0% (9/10)     IGHD1-7*01  6    --------------------------------------------------------------------------------------....  9

                                     ---------------->                                  
                                     W  Y  F  L  A  Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_5733  271  GGTACTTCCTTGCCTATTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  321
D  90.0% (9/10)     IGHD1-7*01  10   ..A...---------------------------------------------  15
J  92.9% (39/42)    IGHJ4*02    7    ---------...A...C.......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_305404

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-20*01                                                                                           327     9e-92
IGHD3-22*01                                                                                           12.2    31   
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-20*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGGGCACTG	GGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGATGGGGCACTGGGTTATTACTATGGTATCGACGTC	VRDGALGYYYGIDV	237	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	24	0	0	100
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	20	4	0	83.3
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	244	8	6	2	0	75
Total	N/A	N/A	233	221	12	0	94.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 
                    Query_5734   12   TGTGCAGCCTCTGGATTCACCTTTGATGATTATGGCATGAGCTGGGTCCGCCAAGCTCCGGGGAAGGGGCTGGAGTGGGTCTCTGGTATT  101
V  94.8% (221/233)  IGHV3-20*01  64   ...........................................................A..............................  153
                                       C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       H  W  N  G  A  S  T  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  A  K  N  S  L  Y  L 
                    Query_5734   102  CATTGGAATGGTGCAAGTACAGCTTATGCAGACTCTGTGAAGGGCCGATTCACCATTTCCAGAGACATTGCCAAGAACTCCCTGTATCTG  191
V  94.8% (221/233)  IGHV3-20*01  154  A............GT..C....G.................................C..........AC.....................  243
                                       N  W  N  G  G  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------------CDR3-IMGT--------------->   
                                       Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  R  V  R  D  G  A  L  G  Y  Y  Y  G  I  D  V  W 
                    Query_5734   192  CAAATGAACAGTCTGAGAGCCGAGGACACGGCCTTGTATCACCGTGTGCGAGATGGGGCACTGGGTTATTACTATGGTATCGACGTCTGG  281
V  94.8% (221/233)  IGHV3-20*01  244  ..........................................T...C.A....-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R                                        
D  100.0% (6/6)     IGHD3-22*01  20   ---------------------------------------------------------------......---------------------  25
J  94.1% (48/51)    IGHJ6*02     12   ---------------------------------------------------------------------.....C.....G.........  32

                                                                    
                                       G  R  G  T  T  V  T  V  S  S 
                    Query_5734   282  GGCCGAGGGACCACGGTCACCGTCTCCTCA  311
J  94.1% (48/51)    IGHJ6*02     33   ....A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_270439

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         336     1e-94
IGHD3-22*01                                                                                           39.1    3e-07
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	G	TTACTATGATAGTAGTGGTT	CCTACCTTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGTTACTATGATAGTAGTGGTTCCTACCTTAACTACTTTGACTAC	ARGYYDSSGSYLNYFDY	246	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  V  S  I  G  S  G  G  H  Y  W  N  W  I  R  Q  P  P  G  K  G  
                    Query_5735     4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTGTCTCCATCGGCAGTGGTGGTCACTACTGGAATTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  93.2% (232/249)  IGHV4-30-4*01  50   .....TCC...A....CA............G.......A.........A.T.........G.............................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_5735     94   TGGAGTGGATTGGGAACATCTATTACAGTGGGAGTACATACTACAACCCGTCCCTCAAGAGTCGAGTTACCATTTCAGTAGACACGTCCA  183
V  93.2% (232/249)  IGHV4-30-4*01  140  ..............T...................C..C...................................A................  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                        K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  Y  Y  D  S  S  G  
                    Query_5735     184  AGAACCACTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTCTATTACTGTGCCAGAGGTTACTATGATAGTAGTGGTT  273
V  93.2% (232/249)  IGHV4-30-4*01  230  .......G............................................G................---------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (20/20)   IGHD3-22*01    4    ----------------------------------------------------------------------....................  23

                                        GT-------------------->                                  
                                        S  Y  L  N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5735     274  CCTACCTTAACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
J  100.0% (48/48)   IGHJ4*02       1    ---------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_113479

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     8e-121
IGHD1-26*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGG	GTGGGAGCTAC	GAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGTGGGAGCTACGAAACTTTGACTAC	ARGGWELRNFDY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	73	1	0	98.6
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	282	11	0	96.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  
                    Query_5736   2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCA  91
V  96.2% (282/293)  IGHV5-51*03  2    ..G..............................................................................G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  M  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  A  G  D  S  D  T  R  Y  
                    Query_5736   92   GCTACTGGATCGGCTGGATGCGCCAGATGCCCGGGAAAGGCCTCGAGTGGATGGGGATCATCTATGCGGGTGACTCTGATACCAGATACA  181
V  96.2% (282/293)  IGHV5-51*03  92   .................G.........................G.....................C.T......................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  F  L  Q  W  S  S  L  R  A  S  D  
                    Query_5736   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTTCCTGCAGTGGAGCAGCCTGAGGGCCTCGGACT  271
V  96.2% (282/293)  IGHV5-51*03  182  ................................................G........A....................A..........A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      S  A  T  Y  Y  C  A  R  G  G  W  E  L  R  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5736   272  CCGCCACGTATTACTGTGCGAGAGGGGGGTGGGAGCTACGAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  96.2% (282/293)  IGHV5-51*03  272  ......T................----------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                 
D  100.0% (11/11)   IGHD1-26*01  7    ----------------------------...........------------------------------------------------  17
J  100.0% (45/45)   IGHJ4*02     4    ------------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_305400

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           378     3e-107
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  H
                    Query_5737   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGGAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATCA  90
V  91.7% (266/290)  IGHV5-51*01  6    ....................C........AA....................G.........A......C.........C.......GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  P
                    Query_5737   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCCC  180
V  91.7% (266/290)  IGHV5-51*01  96   ...................................................G.......A.....G.......G....C.....C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  P  K  A  S  D  T  A
                    Query_5737   181  GTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCCGAAGGCCTCGGACACCGC  270
V  91.7% (266/290)  IGHV5-51*01  186  ...............G........C...................................G.......G..T..................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_5737   271  CTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  350
V  91.7% (266/290)  IGHV5-51*01  276  .A.......C.....G....------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    -----------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_305403

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           341     5e-96
IGHD2-8*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ4*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGCGGGGGTTTATCATGA	TAATGGTG	GCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGCGGGGGTTTATCATGATAATGGTGGCCTTGACTTC	ARRRGFIMIMVALTS	238	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  Y  Y  W  N  W  I  R  Q  T  P  G  K  G  P  E 
                    Query_5738   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTACTACTGGAACTGGATCCGACAGACCCCAGGGAAGGGACCTGAG  90
V  94.7% (231/244)  IGHV4-59*08  49   .......................................A...............G.........G...C...............TG...  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  R  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5738   91   TGGATTGGGTATATCTATTCCAGGGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAAC  180
V  94.7% (231/244)  IGHV4-59*08  139  ...................A...T..................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  N  L  L  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  R  G  F  I  M  I  M  V 
                    Query_5738   181  CAGTTCTCCCTGAACCTGCTCTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGAGACGGCGGGGGTTTATCATGATAATGGTG  270
V  94.7% (231/244)  IGHV4-59*08  229  ..............G...AG.................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD2-8*01   13   ----------------------------------------------------------------------------------........  20

                                      ---------->                                  
                                       A  L  T  S  G  A  R  E  P  W  S  P  F  P  Q 
                    Query_5738   271  GCCTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTTTCCTCAG  315
J  95.2% (40/42)    IGHJ4*02     7    ---......A...........................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_305402

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           385     4e-109
IGHD2-2*01                                                                                            43.0    2e-08 
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAACTTAGTC	TATTGTAGTAGGACCAGCTGCTATG	TCCCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAACTTAGTCTATTGTAGTAGGACCAGCTGCTATGTCCCATACTTTGACTAC	ARNLVYCSRTSCYVPYFDY	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	247	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5739   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  99.6% (247/248)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_5739   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAATCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  99.6% (247/248)  IGHV4-31*03  139  ...............................................C..........................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  N  L  V  Y  C  S  R 
                    Query_5739   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGAACTTAGTCTATTGTAGTAGG  270
V  99.6% (247/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  96.0% (24/25)    IGHD2-2*01   5    ------------------------------------------------------------------------------...........T  16

                                      3-IMGT----------------------->                                  
                                       T  S  C  Y  V  P  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5739   271  ACCAGCTGCTATGTCCCATACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  96.0% (24/25)    IGHD2-2*01   17   .............---------------------------------------------------  29
J  100.0% (46/46)   IGHJ4*02     3    ------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_270433

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            307     1e-85
IGHD3-10*01                                                                                           12.2    32   
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GGGGAG	GGGGAATG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGAGGGGGAATGTACTACTACCACGGTTTGGACGTG	ARGGGGMYYYHGLDV	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	24	3	3	80
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	225	22	3	90


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  V  I  S  G  D  S  V  S  S  T  T  N  W  W  T  W  V  R  Q  P  P  G  K  G 
                    Query_5740   1    ACCCTGTCCCTCACCTGCGTTATCTCTGGTGACTCCGTCAGCAGTACGACTAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGG  90
V  90.0% (225/250)  IGHV4-4*02   49   ...................C.G.........G....A.........G---...........G............................  135
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S     N  W  W  S  W  V  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       P  Q  W  I  G  E  I  L  H  T  G  S  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  I  H  K  S 
                    Query_5740   91   CCGCAATGGATTGGGGAAATCCTTCACACTGGGAGTACCAACTACGACCCGTCCCTCAAGAGTCGAGTCACCATATCAATACACAAGTCC  180
V  90.0% (225/250)  IGHV4-4*02   136  .T.G.G...............TA...T.G......C.........A................................G..G........  225
                                       L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       E  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  G  M  Y  Y 
                    Query_5740   181  GAGAATCAGTTTTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGCGAGGGGGAGGGGGAATGTACTAC  270
V  90.0% (225/250)  IGHV4-4*02   226  A....C.....C.............G........................................A...--------------------  295
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01  16   ----------------------------------------------------------------------......--------------  21
J  94.7% (54/57)    IGHJ6*02     6    ------------------------------------------------------------------------------------......  11

                                      ----------------->                                 
                                       Y  H  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5740   271  TACCACGGTTTGGACGTGTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  321
J  94.7% (54/57)    IGHJ6*02     12   ...T.....A.......C.................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_270432

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_5741   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_5741   91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_5741   181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_5741   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_270431

Length=413
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            405     4e-115
IGHD4-17*01                                                                                           19.9    0.19  
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CTGGGGGCGATACAAGAGGGCCCCTCAATCCT	TGACAACGGTGGCTAC	ACAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCTGGGGGCGATACAAGAGGGCCCCTCAATCCTTGACAACGGTGGCTACACAGGCCTTTGACCTC	VRGWGRYKRAPQSLTTVATQAFDL	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  I  N  Y
                    Query_5742   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATACAGTTTCATCAATTA  90
V  94.5% (275/291)  IGHV1-8*01   6    ..................G...............................................T..........CC....C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  F  A  Q
                    Query_5742   91   TGATATCAATTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGCGGTAACACAGGCTTTGCACA  180
V  94.5% (275/291)  IGHV1-8*01   96   .........C...........................................................T.............A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  T  T  A  Y  M  E  L  S  N  L  R  F  D  D  T  A
                    Query_5742   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGAACACCTCCATAACCACAGCCTACATGGAACTGAGCAACCTGAGATTTGACGACACGGC  270
V  94.5% (275/291)  IGHV1-8*01   186  ............................................G...............G.......G........C...G........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------------CDR3-IMGT------------------------------>     
                                        V  Y  Y  C  V  R  G  W  G  R  Y  K  R  A  P  Q  S  L  T  T  V  A  T  Q  A  F  D  L  W  G
                    Query_5742   271  CGTGTATTATTGTGTGAGAGGCTGGGGGCGATACAAGAGGGCCCCTCAATCCTTGACAACGGTGGCTACACAGGCCTTTGACCTCTGGGG  360
V  94.5% (275/291)  IGHV1-8*01   276  .........C....C......---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R  G                                                                     
D  87.5% (14/16)    IGHD4-17*01  1    -----------------------------------------------------....T......A....---------------------  16
J  90.7% (39/43)    IGHJ4*02     5    ---------------------------------------------------------------------------.......TA......  19

                                                                  
                                        L  G  T  L  L  T  V  S  S 
                    Query_5742   361  CCTGGGAACCCTGCTCACCGTCTCCTCA  388
J  90.7% (39/43)    IGHJ4*02     20   ..A..........G..............  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40498920


Query= Query_113476

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           327     9e-92
IGHD3-10*01                                                                                           10.3    117  
IGHJ3*01                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_5743   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-21*01  47   ............................................AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  T  T  S  E  F  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_5743   91   AGTGGGTCTCATCCATTAGTACTACTAGTGAGTTCATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  92.0% (229/249)  IGHV3-21*01  137  .....................G..G....AGT.A......C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  S  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_5743   181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGCGCCGAGGACACGGCTCTCTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTT  270
V  92.0% (229/249)  IGHV3-21*01  227  ............A......A..............A...............G.G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  93.9% (46/49)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                 
                                      F  D  L  W  G  Q  G  T  M  V  T  V  F  S 
                    Query_5743   271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTTTTCA  311
J  93.9% (46/49)    IGHJ3*01     9    .....G..........A...................C....  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_113471

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD3-3*01                                                                                            35.3    3e-06
IGHJ6*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACGATTTTTGGAGTGGTT	GAGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACGATTTTTGGAGTGGTTGAGCATGGACGTG	ARGRFLEWLSMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	23	4	0	85.2
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  N  G  G  S  I  N  T  Y  F  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_5744   1    ACCCTGTCCCTCACCTGCAGTGTCAACGGCGGCTCCATCAATACTTACTTCTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.0% (222/244)  IGHV4-59*01  49   ...................C....TCT..T..........G..G.....A...................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  S  Y  N  P  S  L  T  S  R  V  P  I  S  V  D  T  S  K  N 
                    Query_5744   91   TGGATTGGCTACATCTACTACAGTGGGACCACCAGTTACAATCCCTCCCTCACGAGTCGAGTCCCCATATCAGTAGACACGTCCAAGAAC  180
V  91.0% (222/244)  IGHV4-59*01  139  ........G..T.....T..........G.....AC.....C..........A..........A..........................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  P  T  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  F  L  E  W  L  S  M 
                    Query_5744   181  CAGTTTTCCCTGAAGCCGACCTCTGCGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGACGATTTTTGGAGTGGTTGAGCATG  270
V  91.0% (222/244)  IGHV4-59*01  229  .....C..........T..G.....T......................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (18/18)   IGHD3-3*01   6    -----------------------------------------------------------------..................-------  23
J  92.5% (37/40)    IGHJ6*02     21   ---------------------------------------------------------------------------------------...  23

                                      ----->                               
                                       D  V  W  G  Q  G  T  T  V  I  V  S  
                    Query_5744   271  GACGTGTGGGGCCAAGGGACCACAGTCATCGTCTCCT  307
J  92.5% (37/40)    IGHJ6*02     24   .....C.................G....C........  60


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_113470

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           357     1e-100
IGHD2-2*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTATCGACTGTACCAT	TACCACCTGC	CGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTATCGACTGTACCATTACCACCTGCCGTTTTGACTTC	ASLIDCTITTCRFDF	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  N  S  R  N  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_5745   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAACAGTCGTAATTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.0% (238/248)  IGHV4-39*01  49   ..................A.....................G....A...G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  N  Y  S  G  T  T  Y  Y  T  A  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_5745   91   CTGGAGTGGATTGGGAGTATCAATTATAGTGGGACCACCTACTACACCGCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  96.0% (238/248)  IGHV4-39*01  139  .....................T............G...........A.C.........................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  I  D  C  T  I  T 
                    Query_5745   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGCCTTATCGACTGTACCATTACC  270
V  96.0% (238/248)  IGHV4-39*01  229  ...........................................................C........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.0% (9/10)     IGHD2-2*01   16   --------------------------------------------------------------------------------------....  19

                                      ----------------->                                  
                                       T  C  R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5745   271  ACCTGCCGTTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  90.0% (9/10)     IGHD2-2*01   20   .G....----------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_270435

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           318     6e-89
IGHD6-6*01                                                                                            10.3    123  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCGGCCGCAATGT	GCTCG	CCCAAGACAGGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAAAGTCGGCCGCAATGTGCTCGCCCAAGACAGGTACTACTTTGACTAC	TKVGRNVLAQDRYYFDY	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	24	18	3	3	75
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	249	228	18	3	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  L  G  T  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5746   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCCGGATTCACACTTGGCACCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-23*01  47   .....................C......T........CT..A...G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  G  G  S  G  T     T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5746   91   AGTGGGTCTCAACCATTGGTGGTAGTGGTACTA---CATACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAATTCCA  177
V  91.6% (228/249)  IGHV3-23*01  137  ...........G.T...A...........GG..GCA............................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  T  K  V  G  R  N  V  L  A  
                    Query_5746   178  GGAACACCCTGTATCTGCAAATGAACAGCCTGACAGCCGAGGACACGGCCGTATATTATTGTACGAAAGTCGGCCGCAATGTGCTCGCCC  267
V  91.6% (228/249)  IGHV3-23*01  227  A......G.........................G........................C...G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD6-6*01   11   ----------------------------------------------------------------------------------.....---  15

                                      GT-------------------->                                  
                                      Q  D  R  Y  Y  F  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_5746   268  AAGACAGGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  324
J  97.9% (47/48)    IGHJ4*02     1    ---------...................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_270434

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_5747   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTA  90
V  97.6% (282/289)  IGHV5-51*03  6    ..............................................................................C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_5747   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  97.6% (282/289)  IGHV5-51*03  96   .......................................................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_5747   181  GTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  ........................C....C....A..................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5747   271  CATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  97.6% (282/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (15/15)   IGHD6-19*01  4    ----------------------------------...............----------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   ----------------------------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_349457

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            329     3e-92
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-22*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTTTG	ACTATGATAGTCGTGGCTTTTAC	AGACGTTCTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTTTGACTATGATAGTCGTGGCTTTTACAGACGTTCTAACTACTTTGACTTC	EGL*L**SWLLQTF*LL*L	242	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	106	52	50	1	1	96.2
CDR2-IMGT	107	127	21	21	0	0	100
FR3-IMGT	128	241	114	105	9	0	92.1
CDR3-IMGT (germline)	242	246	5	5	0	0	100
Total	N/A	N/A	246	230	15	1	93.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><---------------------FR2-IMGT------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  E  G  A 
                    Query_5748   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTACTAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGGAAGGGGCT  90
V  93.5% (230/246)  IGHV4-4*01   49   ..................G.....................GC.G......C..........................A...-........  137
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G   K  G  L

                                      ---------------><-----CDR2-IMGT-----><----------------------------------------------------
                                       G  V  D  W  G  N  L  S  *  W  E  H  P  V  Q  P  V  T  Q  E  S  S  H  D  I  S  R  Q  V  Q 
                    Query_5748   91   GGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCCAGTACAACCCGTCACTCAAGAGTCGAGTCACGATATCAGTAGACAAGTCCAA  180
V  93.5% (230/246)  IGHV4-4*01   138  .....................................A.C...........C.................C....................  227
                                        E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K

                                      FR3-IMGT----------------------------------------------------><-------------------------CDR
                                       E  P  D  L  P  E  V  E  F  C  D  R  R  G  H  G  R  V  F  L  C  E  G  L  *  L  *  *  S  W 
                    Query_5748   181  GAACCAGATCTCCCTGAGGTTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGGCTTTGACTATGATAGTCGTGG  270
V  93.5% (230/246)  IGHV4-4*01   228  .......T.........A.C....C...............................G.........------------------------  293
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                           
D  87.0% (20/23)    IGHD3-22*01  6    --------------------------------------------------------------------------...........A....  21

                                      3-IMGT------------------------>                                  
                                       L  L  Q  T  F  *  L  L  *  L  L  G  P  G  N  P  G  R  C  L  L   
                    Query_5748   271  CTTTTACAGACGTTCTAACTACTTTGACTTCTGGGGCCGGGGAACCCTGGTCGCTGTCTCCTCAG  335
D  87.0% (20/23)    IGHD3-22*01  22   T.A....----------------------------------------------------------  28
J  91.7% (44/48)    IGHJ4*02     1    -----------------............A........A.............A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_240847

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	216	29	0	88.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_5749   1    ACCCTGTCCCTCACCTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  88.2% (216/245)  IGHV4-34*01  49   .......................CTA..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_5749   91   TGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAA  180
V  88.2% (216/245)  IGHV4-34*01  139  ................A............CA.C.AC......C..T......A...............A....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W 
                    Query_5749   181  CAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCTGGCGAAGACAGCGCAACTGG  270
V  88.2% (216/245)  IGHV4-34*01  229  ..GT...........C..A......T.....................G.....C......A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (49/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------.......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5749   271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (49/50)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_349455

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           400     9e-114
IGHD3-3*01                                                                                            19.9    0.17  
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCA	GAGTGCTTATTAT	TT	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGATCAGAGTGCTTATTATTTCAACTACTTCGACCCC	TRDQSAYYFNYFDP	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	296	8	6	2	0	75
Total	N/A	N/A	296	276	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  T  V  S  C  K  A  S  G  Y  T  F  I 
                    Query_5750   1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGACGGTCTCCTGCAAGGCATCTGGATACACGTTCATC  90
V  93.2% (276/296)  IGHV1-46*01  1    .......................G.............A.................A...T.......................C....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  Y  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  H  P  S  A  G  T  T  Y  Y 
                    Query_5750   91   AACTACTATATACACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCCACCCTAGTGCTGGTACCACATACTAC  180
V  93.2% (276/296)  IGHV1-46*01  91   .G.........G...................................................A.........G.....G....AG....  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  R  K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_5750   181  GCACGGAAATTCCAGGGCAGAGTCACCATGACCACGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGTAGCCTGAGATCTGAGGAC  270
V  93.2% (276/296)  IGHV1-46*01  181  ....A...G.........................G....................................C..................  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  T  R  D  Q  S  A  Y  Y  F  N  Y  F  D  P  W  G  Q  G  T  L  V  T  V  S 
                    Query_5750   271  ACGGCCGTTTATTACTGTACAAGAGATCAGAGTGCTTATTATTTCAACTACTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCC  360
V  93.2% (276/296)  IGHV1-46*01  271  ........G.........G.G.....----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  92.3% (12/13)    IGHD3-3*01   16   -----------------------------.....G.......------------------------------------------------  28
J  96.0% (48/50)    IGHJ5*02     2    --------------------------------------------.....GG.......................................  47

                                          
                                       S  
                    Query_5750   361  TCAG  364
J  96.0% (48/50)    IGHJ5*02     48   ....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_349452

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           280     1e-77
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	CCTGTCCCGCGTTATGG	TTTTTGGAATGGTTATT	CCAAAATCTAACTCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCCTGTCCCGCGTTATGGTTTTTGGAATGGTTATTCCAAAATCTAACTCTTTCGACACC	ARGLSRVMVFGMVIPKSNSFDT	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	212	33	0	86.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  L  D  G  H  Y  W  T  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_5751   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGGTCGCTCGATGGTCACTACTGGACCTGGATACGCCAGGCCCCAGGGAAGGGTCTGGAG  90
V  86.5% (212/245)  IGHV4-34*01  49   ..................G......A.........CT..AG....T.........G......C......C.............G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  T  G  D  T  N  Y  N  S  S  L  K  S  R  V  G  L  S  V  D  T  S  R  N 
                    Query_5751   91   TGGATTGGGGAGATTTCTCATACTGGAGACACCAACTACAACTCGTCCCTCAAGAGTCGAGTCGGCTTGTCAGTTGACACGTCCAGGAAC  180
V  86.5% (212/245)  IGHV4-34*01  139  ...........A..CAA.....G....AG.............C....................AC.A.A.....A..........A....  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  T  S  L  T  G  A  D  T  G  V  Y  Y  C  A  R  G  L  S  R  V  M  V  F  G 
                    Query_5751   181  CAGTTCTCCCTGAAGTTGACCTCCCTGACCGGCGCGGACACGGGTGTCTATTACTGTGCGCGAGGCCTGTCCCGCGTTATGGTTTTTGGA  270
V  86.5% (212/245)  IGHV4-34*01  229  ...............C...G...TG......C...........C...G............A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  94.1% (16/17)    IGHD3-3*01   10   ----------------------------------------------------------------------------------........  17

                                      -IMGT--------------------------->                                  
                                       M  V  I  P  K  S  N  S  F  D  T  W  G  P  G  V  L  V  T  V  S  S  
                    Query_5751   271  ATGGTTATTCCAAAATCTAACTCTTTCGACACCTGGGGCCCGGGAGTCCTGGTTACCGTCTCCTCAG  337
D  94.1% (16/17)    IGHD3-3*01   18   G........----------------------------------------------------------  26
J  88.4% (38/43)    IGHJ5*02     9    ------------------------......C.........A....AC......C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_240840

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           349     3e-98
IGHD2-15*01                                                                                           14.1    9.8  
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	GGCC	GGATATT	CATCTGATGGACGTGAATATATGACCCCGTTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGGGCCGGATATTCATCTGATGGACGTGAATATATGACCCCGTTGTTTGACTTT	SRAGYSSDGREYMTPLFDF	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	70	5	0	93.3
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	19	5	0	79.2
FR3-IMGT	175	288	114	98	16	0	86
CDR3-IMGT (germline)	289	293	5	4	1	0	80
Total	N/A	N/A	293	258	35	0	88.1


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I 
                    Query_5752   1    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGACAATCTCCTGCCAGGCTTCCGGTTACAGTTTTATC  90
V  88.1% (258/293)  IGHV1-18*04  1    .......................................................AGG........A.......T.......CC....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  P  H  K  G  N  T  K  Y 
                    Query_5752   91   AACTACGGTATCAGTTGGGTGCGACAGGCCCCTGGACAGGGGCTCGAGTGGATGGGTTGGATCGGCCCGCACAAAGGTAACACAAAATAT  180
V  88.1% (258/293)  IGHV1-18*04  91   .G............C.......................A.....T...........A......A..G.TT....T...........C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  H  L  D  V  R  N  L  R  S  D  D 
                    Query_5752   181  GCACAGAGTTTCCAGGGCAGAGTCACGATGACCACAGACACATTGACGGGCACAGCTCACCTGGACGTGAGGAACCTGCGATCTGACGAC  270
V  88.1% (258/293)  IGHV1-18*04  181  .......AGC................C................CC...A.......CT..A....GC......G....A...........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  V  Y  Y  C  S  R  A  G  Y  S  S  D  G  R  E  Y  M  T  P  L  F  D  F  W  G  Q  G  T 
                    Query_5752   271  ACGGCCGTCTATTACTGTTCGAGGGCCGGATATTCATCTGATGGACGTGAATATATGACCCCGTTGTTTGACTTTTGGGGCCAGGGAACC  360
V  88.1% (258/293)  IGHV1-18*04  271  ........G.........G....-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (7/7)     IGHD2-15*01  2    ---------------------------.......--------------------------------------------------------  8
J  90.7% (39/43)    IGHJ4*02     6    ------------------------------------------------------------------.......AC...............  29

                                                         
                                       P  V  S  V  S  S  
                    Query_5752   361  CCGGTCTCCGTCTCCTCAG  379
J  90.7% (39/43)    IGHJ4*02     30   .T....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_349450

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           344     6e-97
IGHD4-17*01                                                                                           12.2    33   
IGHJ6*02                                                                                              104     1e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCTCGCGAAGGG	GACTAC	CCTAGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGCTCGCGAAGGGGACTACCCTAGGTACTACTACCACGGTATGGACGTC	ARDAREGDYPRYYYHGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5753   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTCGCTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-21*01  47   ............................................A......G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  T  F  I  Y  Y  S  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5753   91   AGTGGGTCTCATCCATTAGTAGCACTAGCACTTTCATATACTACTCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  94.0% (235/250)  IGHV3-21*01  137  ......................T.G...T.G..A..........G........G...................................A  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      E  N  P  L  H  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  R  D  A  R  E  G  D  Y  
                    Query_5753   181  AGAACCCTCTGCATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTTCTGTGCGAGAGATGCTCGCGAAGGGGACTACC  270
V  94.0% (235/250)  IGHV3-21*01  227  .....T.A...T........................C....................A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD4-17*01  2    -----------------------------------------------------------------------------------......-  7

                                      -IMGT----------------------->                                 
                                      P  R  Y  Y  Y  H  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5753   271  CTAGGTACTACTACCACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  98.2% (56/57)    IGHJ6*02     6    -----.........T...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_240842

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           427     1e-121
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGGACAC	TGTAGTAGTGCCATCTGCGATG	GACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTAC	ARHMGHCSSAICDGPDY	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	70	4	0	94.6
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	111	3	0	97.4
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	284	11	0	96.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  Q  K  P  G  E  A  L  K  I  S  C  K  G  S  G  Y  S  F  G  
                    Query_5754   2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGCAAAAGCCGGGGGAGGCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCA  91
V  96.3% (284/295)  IGHV5-51*01  2    ..G.............................A.......C......T......................................AC..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_5754   92   GTTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  181
V  96.3% (284/295)  IGHV5-51*01  92   .C..........G.............................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  
                    Query_5754   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACA  271
V  96.3% (284/295)  IGHV5-51*01  182  .................................C.........C.................................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  M  Y  Y  C  A  R  H  M  G  H  C  S  S  A  I  C  D  G  P  D  Y  W  G  Q  G  T  L  V  
                    Query_5754   272  CCGCCATGTATTACTGTGCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTACTGGGGCCAGGGAACCCTGGTCA  361
V  96.3% (284/295)  IGHV5-51*01  272  .........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  86.4% (19/22)    IGHD2-2*01   8    -----------------------------------.........A...G....T...---------------------------------  29
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------.............................  36

                                                  
                                      T  V  S  S  
                    Query_5754   362  CCGTCTCCTCAG  373
J  100.0% (41/41)   IGHJ4*02     37   ............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_130326

Length=317
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           263     1e-72
IGHD5-12*01                                                                                           18.0    0.54 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	ACGAA	ATAGTGGCCACG	C	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGACAGAACGAAATAGTGGCCACGCCTAC	STERNSGHAY	230	259	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	44	7	0	86.3
CDR2-IMGT	92	115	24	18	6	0	75
FR3-IMGT	116	229	114	103	11	0	90.4
CDR3-IMGT (germline)	230	237	8	6	2	0	75
Total	N/A	N/A	224	196	28	0	87.5


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  S  F  S  D  Y  Y  M  A  W  I  R  Q  D  P  G  K  G  L  Q  W  L  T  Y  I  S  G  D 
                    Query_5755   14   TCTGGATTCAGTTTCAGTGACTACTACATGGCCTGGATCCGCCAGGATCCAGGAAAGGGGCTGCAGTGGCTTACATACATTAGTGGTGAC  103
V  87.5% (196/224)  IGHV3-11*06  73   ..........CC..................AG..............C......G.........G.....G..T...........A..AGT  162
                                       S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  S  S  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       S  S  Y  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  S  S  V  Y  L  Q  M  S 
                    Query_5755   104  TCTAGTTACACAGACTACGCAGACTCTGTTAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAGCTCAGTGTATCTGCAAATGAGT  193
V  87.5% (196/224)  IGHV3-11*06  163  AG..........A................G.....................................A....C...............AC  252
                                       S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><----------CDR3-IMGT--------->                        
                                       S  L  R  E  Q  D  T  A  I  Y  Y  C  S  T  E  R  N  S  G  H  A  Y  W  G  Q  G  T  L  V  T 
                    Query_5755   194  AGCCTGAGAGAGCAGGACACGGCTATTTATTACTGTTCGACAGAACGAAATAGTGGCCACGCCTACTGGGGCCAGGGAACCCTGGTCACC  283
V  87.5% (196/224)  IGHV3-11*06  253  ..........CCG...........G.G.........G...G...----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  91.7% (11/12)    IGHD5-12*01  7    -------------------------------------------------........T...-----------------------------  18
J  100.0% (38/38)   IGHJ4*02     11   --------------------------------------------------------------............................  38

                                                
                                       V  S  S  
                    Query_5755   284  GTCTCCTCAG  293
J  100.0% (38/38)   IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30621390


Query= Query_240848

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            329     3e-92
IGHD2-15*01                                                                                           12.2    31   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	GTGGTA	CTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACGTGGTACTCGGGGTTTTGACTAC	ARHLGTRGTRGFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	27	22	2	3	81.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	246	230	13	3	93.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  F  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_5756   1    ACCCTGTCCCTCACCTGCGCTGTCTTTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  87
V  93.5% (230/246)  IGHV4-4*02   49   .........................C.....G.....T........GTA.......................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  T  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  I  I  S  L  D  T  S  K 
                    Query_5756   88   GAGTGGATTGGGGAAACCTATCACAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCACTAGACACGTCCAAG  177
V  93.5% (230/246)  IGHV4-4*02   139  ................T......T...........................................C.......G......A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  R  G  T  R 
                    Query_5756   178  AATCAGTTCTCCCTGAATCTCAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACGTGGTACTCGG  267
V  93.5% (230/246)  IGHV4-4*02   229  ..C..............G..G.G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-15*01  15   -------------------------------------------------------------------------------......-----  20

                                      ----------->                                  
                                       G  F  D  Y  W  G  *  G  T  Q  V  T  V  S  S  
                    Query_5756   268  GGTTTTGACTACTGGGGCTAGGGAACCCAGGTCACCGTCTCCTCAG  313
J  95.3% (41/43)    IGHJ4*02     6    ---...............C.........T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_349458

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD6-6*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTC	ATTREQLVPIFDF	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	269	18	0	93.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  L  S  S  Y
                    Query_5757   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATTTCCTGTAAGGGTTCTGGATACAGATTAAGCAGTTA  90
V  93.7% (269/287)  IGHV5-51*01  6    ......................................................C.......................C..T.C...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  E  T  K  Y  S  P
                    Query_5757   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCGTCTATCCTGGTGACTCTGAGACCAAATACAGCCC  180
V  93.7% (269/287)  IGHV5-51*01  96   C.......G..........................................G...A...................T....G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  A  S  G  T  A  F  L  Q  W  D  S  L  K  A  S  D  T  A
                    Query_5757   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGGCCAGCGGCACCGCCTTCCTGCAGTGGGACAGCCTGAAGGCCTCGGACACCGC  270
V  93.7% (269/287)  IGHV5-51*01  186  .......C.............................T...T.A.........A..........AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_5757   271  CATGTATTACTGTGCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  356
V  93.7% (269/287)  IGHV5-51*01  276  .................---------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------.......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_182477

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           338     4e-95
IGHD6-19*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	GTAGAGG	GCAGTGGCTGG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTAGAGGGCAGTGGCTGGAACTAC	ARVEGSGWNY	246	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	251	6	5	1	0	83.3
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  S  G  G  S  I  G  S  T  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_5758   4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCGGCAGTACTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  93.5% (232/248)  IGHV4-39*01  50   .....TCC...A.....A....................A......G..........................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  I  D  T  S  
                    Query_5758   94   TGGAGTGGATTGGGAGTATCTATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAAGAGTCGACTCACCATATCCATAGACACGTCCG  183
V  93.5% (232/248)  IGHV4-39*01  140  .........................T..............C........................G...........G...........A  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      E  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  V  E  G  S  G  W  N  
                    Query_5758   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTATCTATTACTGTGCCAGAGTAGAGGGCAGTGGCTGGAACT  273
V  93.5% (232/248)  IGHV4-39*01  230  ..................................................G.G...........G...----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-19*01  8    ---------------------------------------------------------------------------...........----  18
J  97.4% (38/39)    IGHJ4*02     10   ---------------------------------------------------------------------------------------...  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  I  S  S  
                    Query_5758   274  ACTGGGGCCAGGGAACCCTGGTCACCATCTCCTCAG  309
J  97.4% (38/39)    IGHJ4*02     13   ..........................G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_182475

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         294     6e-82
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	GGAGTCGTAATTAT	CATGGGAATTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGAGTCGTAATTATCATGGGAATTTCTACTTCGACCAC	ARGSRNYHGNFYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  D  S  V  Y  Y  S  L  N  W  I  R  Q  T  P  L  K  G 
                    Query_5759     1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCATCGACAGTGTTTACTACTCCTTAAACTGGATCCGGCAGACACCACTGAAGGGC  90
V  87.6% (219/250)  IGHV4-30-2*01  49   .......................C...............AG.....G.GGT.......GG.G.............C.....GG.......  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Q  H  S  G  A  T  Y  Y  N  P  S  L  E  S  R  V  S  L  S  V  D  R  P 
                    Query_5759     91   CTGGAGTGGATTGGCTACATCCAGCATTCTGGGGCCACCTACTACAACCCGTCCCTCGAGAGTCGGGTCTCCCTTTCAGTAGACCGGCCC  180
V  87.6% (219/250)  IGHV4-30-2*01  139  ..............G......T.T...AG....AG......................A.......A...A..A.A.........A..T..  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  S  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  R  N  Y  H  G 
                    Query_5759     181  AAGAGCCAGTTCTCCCTGAGGCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGAGGGAGTCGTAATTATCATGGG  270
V  87.6% (219/250)  IGHV4-30-2*01  229  ....A..............A.....G...........................G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  85.7% (12/14)    IGHD3-3*01     15   ----------------------------------------------------------------------.....G..T.....------  28

                                        ----------------->                                  
                                         N  F  Y  F  D  H  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_5759     271  AATTTCTACTTCGACCACTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTCAG  322
J  91.5% (43/47)    IGHJ4*02       2    -----......T...T...............C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_182472

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGCG	GGCTGG	G	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCTGGGAACTGGTTCGACCCC	ARGRRAGNWFDP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  F  W  S  W  I  R  R  P  P  G  K  G 
                    Query_5760   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTTCTGGAGTTGGATCCGCCGGCCCCCAGGGAAGGGC  90
V  92.8% (232/250)  IGHV4-31*01  49   ..................A....................................A......C..........A..A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  E  N  T  Q  Y  N  P  S  L  K  S  L  V  T  I  S  G  D  T  S 
                    Query_5760   91   CTGGAGTGGATTGGATACATCTATTACGGTGAGAATACCCAGTACAACCCGTCCCTCAAGAGTCTGGTTACCATATCAGGAGACACCTCT  180
V  92.8% (232/250)  IGHV4-31*01  139  ..............G............A...G..GC...T.C.......................A.............T......G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       T  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  W 
                    Query_5760   181  ACGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCTGGGAACTGG  270
V  92.8% (232/250)  IGHV4-31*01  229  .A.................A.................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------......-------  18
J  93.9% (46/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  D  P  W  G  H  G  I  L  V  T  V  T  S  
                    Query_5760   271  TTCGACCCCTGGGGCCACGGAATCCTGGTCACCGTCACCTCAG  313
J  93.9% (46/49)    IGHJ5*02     9    .................G....C.............T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_182470

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           420     7e-120
IGHD3-10*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTAGAAGA	TTCGGGGAGT	CACGACTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTAGAAGATTCGGGGAGTCACGACTCTTACTACTACGCTATGGACGTC	ARDPLEDSGSHDSYYYAMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  R  Y
                    Query_5761   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGGTA  90
V  96.2% (280/291)  IGHV1-46*01  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  I  I  N  P  S  G  G  T  T  K  Y  A  Q
                    Query_5761   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCAATAATCAATCCTAGTGGTGGTACCACAAAATACGCACA  180
V  96.2% (280/291)  IGHV1-46*01  96   ..................................................G.........C.............G.....GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  D  L  T  S  L  R  S  E  D  T  A
                    Query_5761   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGACCTGACCAGCCTGAGATCTGAGGACACGGC  270
V  96.2% (280/291)  IGHV1-46*01  186  ............................................................G....G........................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        I  Y  Y  C  A  R  D  P  L  E  D  S  G  S  H  D  S  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T
                    Query_5761   271  CATCTATTACTGTGCGAGAGATCCTTTAGAAGATTCGGGGAGTCACGACTCTTACTACTACGCTATGGACGTCTGGGGCCAAGGGACCAC  360
V  96.2% (280/291)  IGHV1-46*01  276  .G.G.................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD3-10*01  13   ---------------------------------..........-----------------------------------------------  22
J  98.1% (53/54)    IGHJ6*02     9    ----------------------------------------------------..........G...........................  46

                                                      
                                        V  T  V  S  S 
                    Query_5761   361  GGTCACCGTCTCCTCA  376
J  98.1% (53/54)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_182479

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-16*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCT	TTACGTTTGGGGGAGCTATG	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTTTACGTTTGGGGGAGCTATGGACTACTTTGACTAC	ARGLFTFGGAMDYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  A  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_5762   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCGCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ...............................G.T..........................................A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  S  T  Y  S  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_5762   91   CTGGAGTGGATTGGGTACATCTATTACCGTGGGAGCACGTACTCCAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ...........................A..........C....A..............................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  L  S  V  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  F  T  F  G  G 
                    Query_5762   181  AAGAACCAGTTGTCCGTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTATTGTGCGAGAGGCCTCTTTACGTTTGGGGGA  270
V  96.4% (241/250)  IGHV4-31*03  229  ...........C...C...........................................C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-16*01  10   ----------------------------------------------------------------------------..............  23

                                      GT------------------>                                  
                                       A  M  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5762   271  GCTATGGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  95.0% (19/20)    IGHD3-16*01  24   .T....-------------------------------------------------  29
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_201910

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           332     3e-93
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
Total	N/A	N/A	242	227	15	0	93.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5763   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.8% (227/242)  IGHV3-33*03  47   .....................................C..C.....C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  R  Y  D  G  I  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  F  R  D  D  S  
                    Query_5763   91   AGTGGGTGGCAGTTATACGGTATGATGGAATTAAGAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTTCAGAGACGACTCCA  180
V  93.8% (227/242)  IGHV3-33*03  137  .................T............G...T........................................C.......A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_5763   181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCG  270
V  93.8% (227/242)  IGHV3-33*03  227  .......G....A......A..............................G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  90.9% (10/11)    IGHD6-13*01  7    -------------------------------------------------------------------....G......------------  17
J  97.8% (45/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_5763   271  ACCCCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  309
J  97.8% (45/46)    IGHJ5*02     13   .....................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_201911

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           350     9e-99
IGHD5-18*01                                                                                           14.1    9.0  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCAGC	ATACATCTCTGGT	CACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAGCATACATCTCTGGTCACCCCTAC	SAYISGHPY	286	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	18	6	0	75
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	171	21	15	6	0	71.4
FR3-IMGT	172	285	114	102	12	0	89.5
Total	N/A	N/A	284	254	30	0	89.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  P  V  S  
                    Query_5764   2    AGGTGCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGCGACTCTCCTGTGCAGCCTCTGGATTCCCCGTCAGTG  91
V  89.4% (254/284)  IGHV3-53*01  2    ..............G......................................A......................G...A........A  91
                                         V  Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  

                                      T------><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------
                                      V  H  Y  M  S  W  V  R  Q  A  P  G  R  G  L  E  W  V  S  A  I  L  T  S  G  K  T  Y  Y  T  
                    Query_5764   92   TACACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAGGGGACTGGAGTGGGTCTCAGCGATTCTTACCAGTGGTAAGACATACTACACAG  181
V  89.4% (254/284)  IGHV3-53*01  92   GCA.................................A...G................TT...TA..G.G......GC.........G...  181
                                      S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      D  S  A  M  G  R  F  T  I  S  R  D  S  S  K  N  T  V  N  L  Q  M  N  S  L  S  A  G  D  T  
                    Query_5764   182  ACTCCGCGATGGGCCGATTCACCATCTCCAGAGACTCTTCCAAGAACACAGTGAATCTTCAAATGAACAGCCTGAGCGCCGGGGACACGG  271
V  89.4% (254/284)  IGHV3-53*01  182  ......T..A.........................AA............GC..T......................A....A........  271
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  

                                      -------------><--------CDR3-IMGT-------->                                  
                                      A  F  Y  Y  C  S  A  Y  I  S  G  H  P  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5764   272  CCTTCTATTACTGTTCAGCATACATCTCTGGTCACCCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  346
V  89.4% (254/284)  IGHV3-53*01  272  ..G.G.........-------------------------------------------------------------  285
                                      A  V  Y  Y  C                                                              
D  84.6% (11/13)    IGHD5-18*01  5    -------------------.....G..A....-------------------------------------------  17
J  100.0% (38/38)   IGHJ4*02     11   -------------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_201912

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           392     2e-111
IGHD2-15*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGC	ATATTGTAGTGATAGTAACTGCTAC	CCGAGGGAGCG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGCATATTGTAGTGATAGTAACTGCTACCCGAGGGAGCGCTACTTTGACCAC	ARLAYCSDSNCYPRERYFDH	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  A  G  E  S  L  R  I  S  C  K  V  S  G  Y  K  F  A  T  Y
                    Query_5765   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGGCGGGGGAGTCTCTGAGGATCTCCTGTAAGGTGTCTGGATACAAGTTTGCCACCTA  90
V  93.4% (270/289)  IGHV5-51*03  6    ..................................C...............A..............GT..........GC...A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  M  Y  P  S  D  S  D  A  R  Y  S  P
                    Query_5765   91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATGTATCCTAGTGACTCTGATGCCAGATACAGCCC  180
V  93.4% (270/289)  IGHV5-51*03  96   C...................................................A....C......G...........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  G  L  E  A  S  D  T  A
                    Query_5765   181  GTCCTTTGAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGTGGCCTGGAGGCCTCGGACACCGC  270
V  93.4% (270/289)  IGHV5-51*03  186  ......CC................C.........................................CA.....A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  Y  C  A  R  L  A  Y  C  S  D  S  N  C  Y  P  R  E  R  Y  F  D  H  W  G  Q  G  T  L
                    Query_5765   271  CATGTATTACTGTGCGAGACTGGCATATTGTAGTGATAGTAACTGCTACCCGAGGGAGCGCTACTTTGACCACTGGGGCCAGGGAACCCT  360
V  93.4% (270/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  88.0% (22/25)    IGHD2-15*01  4    ------------------------...........G.G...G.......-----------------------------------------  28
J  95.7% (45/47)    IGHJ4*02     2    ------------------------------------------------------------..........T...................  31

                                                       
                                        V  T  V  S  S  
                    Query_5765   361  GGTCACCGTCTCGTCAG  377
J  95.7% (45/47)    IGHJ4*02     32   ............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_201913

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           382     4e-108
IGHD3-10*01                                                                                           12.2    35    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCCAGC	GGGAGT	GAAAAGTTAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGCAGATCCAGCGGGAGTGAAAAGTTAATTGACTCT	GRSSGSEKLIDS	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	4	2	0	66.7
Total	N/A	N/A	288	266	22	0	92.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  E  A  S  G  Y  T  F  S  N  Y 
                    Query_5766   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAAGTCTCCTGCGAGGCTTCTGGTTACACCTTTAGCAACTAC  91
V  92.4% (266/288)  IGHV1-18*04  7    ..................................................G.........A.....................C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       E  I  S  W  V  R  Q  A  R  G  Q  G  L  E  W  M  G  C  I  S  G  Y  S  G  D  T  E  Y  A  Y 
                    Query_5766   92   GAAATCAGCTGGGTGCGACAGGCCCGTGGACAAGGGCTTGAGTGGATGGGATGCATCAGCGGTTACAGTGGTGACACAGAGTATGCATAC  181
V  92.4% (266/288)  IGHV1-18*04  97   .GT......................C...........................G.......C.....A....A.....A.C......C.G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       Q  F  R  G  R  V  T  M  T  T  D  T  S  A  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_5766   182  CAATTCCGGGGCAGAGTCACCATGACCACAGACACATCCGCGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.4% (266/288)  IGHV1-18*04  187  A.GC...A...............................A..................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  G  R  S  S  G  S  E  K  L  I  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5766   272  GTGTATTACTGTGGCAGATCCAGCGGGAGTGAAAAGTTAATTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.4% (266/288)  IGHV1-18*04  277  .............CG...----------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD3-10*01  17   ------------------------......----------------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    ----------------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_201915

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            319     2e-89
IGHD1-7*01                                                                                            16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGCGA	CCGA	GGAACTAC	CAGGATGTTCGAGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGACCGAGGAACTACCAGGATGTTCGAGAATGCTCTTGATATC	AGDRGTTRMFENALDI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	248	8	6	2	0	75
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  G  V  S  G  G  A  I  S  S  S  H  W  W  N  W  V  R  Q  A  P  G  K  G  L 
                    Query_5767  1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGCGGCGCCATCAGCAGCAGTCACTGGTGGAATTGGGTCCGCCAGGCCCCCGGGAAGGGGCTG  90
V  91.1% (226/248)  IGHV4-4*02  49   ...................C.........T...T..........T...A.........G.............C....A............  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  Q  I  Y  H  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S  K 
                    Query_5767  91   GAGTGGATTGGGCAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAGGAGTCGAGTCAGCATCTCAATAGACACGTCCAAG  180
V  91.1% (226/248)  IGHV4-4*02  139  ............G..........................................A...........C...A...G......A.......  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                      H  Q  F  A  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  D  R  G  T  T  R  M  F 
                    Query_5767  181  CACCAGTTCGCCCTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGCGGGCGACCGAGGAACTACCAGGATGTTC  270
V  91.1% (226/248)  IGHV4-4*02  229  A........T........C...G...........................G.....C......A.A..----------------------  296
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD1-7*01  10   ------------------------------------------------------------------------........----------  17

                                     ----------------->                                  
                                      E  N  A  L  D  I  W  G  Q  G  T  T  V  I  V  S  S  
                    Query_5767  271  GAGAATGCTCTTGATATCTGGGGCCAAGGGACAACGGTCATCGTCTCTTCAG  322
J  93.8% (45/48)    IGHJ3*02    3    ----.....T........................T.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_201916

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           321     7e-90
IGHD6-19*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTGTAATGGGAGAC	CAGTGGCTG	AGACGTCCACACTTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTGTAATGGGAGACCAGTGGCTGAGACGTCCACACTTCCTTGACTCC	ARGVMGDQWLRRPHFLDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5768   1    GGTCCCTGAGACTCTCCTGTTCAGCGTCTGGATTTACCTTTAGTCGCTATGGCATGCACTGGGTCCGCCAGGCTCCGGGCAAGGGGCTGG  90
V  91.2% (227/249)  IGHV3-33*01  47   ....................G.............C.....C...A...............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  Y  D  G  S  D  E  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5768   91   AGTGGCTGGCAGTTATTTCGTATGATGGAAGTGATGAAAACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  91.2% (227/249)  IGHV3-33*01  137  .....G..........A.G.............A..A..T...................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  H  T  I  D  L  Q  M  N  S  L  R  V  E  D  T  A  I  Y  Y  C  A  R  G  V  M  G  D  Q  W  
                    Query_5768   181  GGCACACGATTGACCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTATTTATTATTGTGCGAGAGGTGTAATGGGAGACCAGTGGC  270
V  91.2% (227/249)  IGHV3-33*01  227  A.A.....C.GT.T......................C...G.........G.G.....C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-19*01  9    -----------------------------------------------------------------------------------.......  15

                                      IMGT--------------------->                                
                                      L  R  R  P  H  F  L  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5768   271  TGAGACGTCCACACTTCCTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  328
D  100.0% (9/9)     IGHD6-19*01  16   ..--------------------------------------------------------  17
J  97.5% (39/40)    IGHJ4*02     7    ------------------......A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_201917

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            346     2e-97
IGHD3-10*01                                                                                           43.0    2e-08
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GTGGCCCCT	TATTATTATGGTTCGGGGAGTTATT	CT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTGGCCCCTTATTATTATGGTTCGGGGAGTTATTCTTAC	AVAPYYYGSGSYSY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  A  F  W  M  T  W  V  R  Q  G  P  G  K  G  L  
                    Query_5769   1    GGTCCCTGAGACTCTCCTGCTCAGCCTCTGGATTCACCTTTAGTGCCTTTTGGATGACCTGGGTCCGCCAGGGTCCAGGGAAGGGGCTGG  90
V  95.1% (233/245)  IGHV3-7*03   47   ...................TG.......................AG..A........G..............C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  G  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  G  D  N  A  
                    Query_5769   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGGGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCGGAGACAACGCCA  180
V  95.1% (233/245)  IGHV3-7*03   137  .................................A...........................................A............  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  G  D  D  T  A  V  Y  Y  C  A  V  A  P  Y  Y  Y  G  S  
                    Query_5769   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGGCGACGACACGGCCGTGTATTACTGTGCGGTGGCCCCTTATTATTATGGTTCGG  270
V  95.1% (233/245)  IGHV3-7*03   227  ....C...............................C...G........................-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  96.0% (24/25)    IGHD3-10*01  2    --------------------------------------------------------------------------.....C..........  17

                                      ------------->                                  
                                      G  S  Y  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5769   271  GGAGTTATTCTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  96.0% (24/25)    IGHD3-10*01  18   .........---------------------------------------  26
J  100.0% (37/37)   IGHJ4*02     12   -----------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_201918

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           279     3e-77
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	216	28	6	86.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_5770   4    CCCTGAGACTCTCCTGTGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.4% (216/250)  IGHV4-34*01  50   .....TCC...A....C.....C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_5770   94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.4% (216/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_5770   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.4% (216/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_5770   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_201919

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           31.5    5e-05 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAG	TTACTTTGCTAGTAGTGGTTAT	GCTCAGGG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTACTTTGCTAGTAGTGGTTATGCTCAGGGCGGTATGGACGTC	ARESYFASSGYAQGGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5771   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  S  I  S  S  S  S  N  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5771   91   ACTGGGTCTCATCCATTAGTAGTAGTAGTAATTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  .G............................G...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  R  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  S  Y  F  A  S  S  
                    Query_5771   181  AGAACTCACTGTATCTGCAAATGAACAGGCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAAAGTTACTTTGCTAGTAGTG  270
V  98.4% (246/250)  IGHV3-21*01  227  ............................C.........................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (20/22)    IGHD3-22*01  4    -------------------------------------------------------------------------.....A..A........  20

                                      IMGT--------------------->                                 
                                      G  Y  A  Q  G  G  M  D  V  W  G  Q  G  T  T  V  P  V  S  S 
                    Query_5771   271  GTTATGCTCAGGGCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCCCCGTCTCCTCA  329
D  90.9% (20/22)    IGHD3-22*01  21   .....------------------------------------------------------  25
J  97.8% (45/46)    IGHJ6*02     17   -------------..................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_72405

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         322     2e-90
IGHD2-2*01                                                                                            35.3    4e-06
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGGGGAG	TATTGTAGTAGTACCAACTGC	ATG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGGGGAGTATTGTAGTAGTACCAACTGCATGTACGGTCTGGACGTC	ARGGEYCSSTNCMYGLDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  D  I  Y  S  W  N  W  I  R  Q  P  P  G  M  G 
                    Query_5772     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCTCCAGTGATATTTACTCCTGGAACTGGATCCGGCAGCCACCAGGGATGGGC  90
V  91.5% (227/248)  IGHV4-30-2*01  49   .......................................AG.....G.GG...........G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  V  G  H  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  R  S 
                    Query_5772     91   CTGGAGTGGGTTGGCCACATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCCAGAGTCGAGTCACCATCTCAGTTGACAGGTCC  180
V  91.5% (227/248)  IGHV4-30-2*01  139  .........A....GT..................G......................A................A.....A.........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  K  H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  E  Y  C  S  S 
                    Query_5772     181  AAGAAACACTTCTCGTTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGGGGGGGGGAGTATTGTAGTAGT  270
V  91.5% (227/248)  IGHV4-30-2*01  229  .....C..G.....CC...A.....G...........................G..............----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  95.2% (20/21)    IGHD2-2*01     5    ------------------------------------------------------------------------------............  16

                                        -IMGT--------------------->                                 
                                         T  N  C  M  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5772     271  ACCAACTGCATGTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
D  95.2% (20/21)    IGHD2-2*01     17   ....G....---------------------------------------------------  25
J  97.9% (47/48)    IGHJ6*02       15   ------------......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_41694

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     1e-95
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  G  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5773   1    ACCCTGTCCCTCACCGGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   ...............T.......................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  M  N 
                    Query_5773   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCATGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G..................A...............C...................................C.....A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_5773   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  94.3% (231/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  91.4% (53/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  R  T  V  I  V  S  S 
                    Query_5773   271  GTCTGGGGCCAAGGGCGCACGGTCATCGTCTCCTCA  306
J  91.4% (53/58)    IGHJ6*02     27   ...............AC........C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_109279

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           321     7e-90
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	ACAGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAACAGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5774   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.2% (224/243)  IGHV4-34*01  49   ................................G...T..................G...........................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  L  S  L  D  M  S  K  K 
                    Query_5774   91   TGGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGCGTCTCCTTATCATTAGACATGTCCAAGAAG  180
V  92.2% (224/243)  IGHV4-34*01  139  .............................C..................C..A.......A...A..A.....G......C.........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  V  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y 
                    Query_5774   181  CAGTTCTCCGTGAAGGTGACGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCAAGAACAGTAAAGGGGGTTATTACTGTCTAC  270
V  92.2% (224/243)  IGHV4-34*01  229  .........C.....C...GC..........................G...........G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  20   --------------------------------------------------------------------------..........------  29

                                      -------------------->                                 
                                       Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5774   271  CAGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  100.0% (40/40)   IGHJ6*02     23   --------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_83318

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            276     3e-76
IGHD4-17*01                                                                                           14.1    8.5  
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGAGGCAGCAGG	CGGTGAC	AGGGCG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGAGGCAGCAGGCGGTGACAGGGCGGCTTTTGATATC	ARDQEAAGGDRAAFDI	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	21	6	0	77.8
FR2-IMGT	57	107	51	46	5	0	90.2
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	213	37	0	85.2


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  S  V  S  G  G  S  I  R  K  P  N  W  W  F  W  V  R  Q  A  P  G  K  G  
                    Query_5775   1    GGTCCCTGAGACTCTCCTGCTCAGTCTCTGGGGGCTCCATCAGAAAACCTAACTGGTGGTTTTGGGTCCGCCAGGCCCCAGGGAAGGGTC  90
V  85.2% (213/250)  IGHV4-4*02   47   ..A.....TCC...A.....G.T........T...........C.GTAG..........AG.............C.............G.  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  K  I  Y  H  S  G  T  T  N  Y  N  L  S  L  E  S  R  V  I  I  S  V  D  K  S  
                    Query_5775   91   TGGAGTGGATTGGGAAAATTTATCATAGTGGGACCACCAATTACAATCTGTCCCTCGAGAGTCGAGTCATCATTTCAGTGGACAAGTCCA  180
V  85.2% (213/250)  IGHV4-4*02   137  ..............G....C.............G......C.....C.C.......A............C...A.....A..........  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  V  F  S  L  R  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  Q  E  A  A  G  G  
                    Query_5775   181  AGAACGTCTTCTCCTTGCGGCTGACCTCTGTGACCGCCGCGGACACAGCCATATATTACTGTGCGAGAGATCAGGAGGCAGCAGGCGGTG  270
V  85.2% (213/250)  IGHV4-4*02   227  .....CAG......C..AA.....G.....................G...G.G.................--------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD4-17*01  7    -------------------------------------------------------------------------------------.....  11

                                      T------------------>                                  
                                      D  R  A  A  F  D  I  W  G  Q  G  R  M  V  V  V  S  S  
                    Query_5775   271  ACAGGGCGGCTTTTGATATCTGGGGCCAAGGGAGAATGGTCGTCGTCTCTTCAG  324
D  100.0% (7/7)     IGHD4-17*01  12   ..----------------------------------------------------  13
J  93.5% (43/46)    IGHJ3*02     5    --------.........................C.......AC...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_329145

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           316     2e-88
IGHD3-10*01                                                                                           10.3    116  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGA	CTTCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGACTTCAGGCCTTTGACTCC	ARGGLQAFDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  G  G  F  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_5776   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAACAGTGGTGGATTCTACTGGACTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  90.4% (226/250)  IGHV4-31*03  49   .......................C................G.........T.A........GC...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  Y  T  G  H  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  L  D  T  S 
                    Query_5776   91   CTAGAGTGGATTGGTTACATCTTTTACACTGGACACACCTACTACAATCCGTCCCTCAGGAGTCGACTTACCATTTCACTGGACACATCT  180
V  90.4% (226/250)  IGHV4-31*03  139  ..G...........G.......A.....G...GAG............C..........A.......G.......A...G.A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       E  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  L  Q  A  F  D 
                    Query_5776   181  GAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGGGGACTTCAGGCCTTTGAC  270
V  90.4% (226/250)  IGHV4-31*03  229  A...................G.....C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------.....---------------  20
J  95.5% (42/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_5776   271  TCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  307
J  95.5% (42/44)    IGHJ4*02     12   .A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_189980

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     6e-104
IGHD7-27*01                                                                                           14.1    8.3   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCA	AACTGGG	AACTCAATAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGACGTCAAACTGGGAACTCAATATACAACTGGTTCGACCCC	SRRQTGNSIYNWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5777   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (239/243)  IGHV4-59*01  49   .......................................................G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5777   91   TGGATTGGATATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  ........G.................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  R  R  Q  T  G  N  S  I  Y  N 
                    Query_5777   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTTCGAGACGTCAAACTGGGAACTCAATATACAAC  270
V  98.4% (239/243)  IGHV4-59*01  229  .............A...........................................G.....---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD7-27*01  3    --------------------------------------------------------------------.......---------------  9
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------------.....  5

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5777   271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (51/51)   IGHJ5*02     6    ..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_243571

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           361     4e-102
IGHD6-13*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCTCGCCACAGAA	AGCAGCAGCT	ATAACTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCTCGCCACAGAAAGCAGCAGCTATAACTTACTACTTTGACTAC	ARVSPQKAAAITYYFDY	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	113	1	0	99.1
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	237	6	0	97.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  H  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_5778   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACCACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  97.5% (237/243)  IGHV4-59*01  50   .....TCC...A...................................T..........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_5778   94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  97.5% (237/243)  IGHV4-59*01  140  ..........................................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  P  Q  K  A  A  A  I  
                    Query_5778   184  AGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTCTCGCCACAGAAAGCAGCAGCTATAA  273
V  97.5% (237/243)  IGHV4-59*01  230  ...................C...........................................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD6-13*01  7    ----------------------------------------------------------------------------..........----  16

                                      ---------------->                                  
                                      T  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5778   274  CTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (48/48)   IGHJ4*02     1    ---................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_243572

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           300     9e-84
IGHD2-15*01                                                                                           12.2    36   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTC	ATTGTA	T	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTCATTGTATTACGGTATGGACGTC	ARGVADDGWRGGRRVSLYYGMDV	261	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	43	8	0	84.3
CDR2-IMGT	126	146	21	14	7	0	66.7
FR3-IMGT	147	260	114	98	16	0	86
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	230	38	0	85.8


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  V  S  L  T  C  A  V  Y  G  G  S  F  S  G  H  C  W  T  W  I  R  
                    Query_5779   1    CAGGACTGGTGAAGCCCTCGGAAACCGTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTTAGTGGTCACTGCTGGACCTGGATTCGCC  90
V  85.8% (230/268)  IGHV4-34*01  26   ........T.......T.....G...C..................................C......T...A.....G......C....  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  T  P  G  K  G  L  E  W  I  G  E  M  N  H  K  G  R  T  T  Y  N  P  S  L  M  S  R  V  T  
                    Query_5779   91   AGACACCAGGGAAGGGACTGGAATGGATTGGTGAGATGAATCACAAAGGCAGGACGACCTACAACCCGTCGCTAATGAGTCGAGTCACCA  180
V  85.8% (230/268)  IGHV4-34*01  116  ..C.C...........G.....G........G..A..C.....T.GT..A..C..C.A............C..C.A..............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  L  S  L  R  L  T  S  L  I  A  A  D  T  A  M  Y  Y  C  A  R  G  
                    Query_5779   181  TCTCAGTGGACACGTCCAAGAATCAGCTCTCCCTGAGATTGACCTCTTTAATCGCCGCGGACACGGCTATGTATTACTGTGCGAGAGGCG  270
V  85.8% (230/268)  IGHV4-34*01  206  .A.....A..............C...T.........AGC...G....G.G.C................G...................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  

                                      --------------------CDR3-IMGT----------------------------->                               
                                      V  A  D  D  G  W  R  G  G  R  R  V  S  L  Y  Y  G  M  D  V  W  G  Q  G  V  T  V  T  V  S  
                    Query_5779   271  TGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTCATTGTATTACGGTATGGACGTCTGGGGCCAGGGAGTCACGGTCACCGTCTCCT  360
D  100.0% (6/6)     IGHD2-15*01  6    -------------------------------------......-----------------------------------------------  11
J  91.7% (44/48)    IGHJ6*02     15   --------------------------------------------.......................A..GAC.................  60

                                        
                                      S 
                    Query_5779   361  CA  362
J  91.7% (44/48)    IGHJ6*02     61   ..  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_243574

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_5780   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTA  90
V  97.6% (282/289)  IGHV5-51*03  6    ..............................................................................C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_5780   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  97.6% (282/289)  IGHV5-51*03  96   .......................................................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_5780   181  GTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  ........................C....C....A..................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5780   271  CATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  97.6% (282/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (15/15)   IGHD6-19*01  4    ----------------------------------...............----------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   ----------------------------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_243575

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           344     6e-97
IGHD2-15*01                                                                                           12.2    32   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAT	TAGCTG	TATCCGCGCCCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTAGCTGTATCCGCGCCCTACTACTTTGACTAC	RDD*LYPRPTTLTT	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	26	27	26	0	1	96.3
CDR1-IMGT	27	56	30	26	4	0	86.7
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	21	0	0	100
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	250	237	12	1	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L   P  A  L  S  L  V  T  P  S  P  I  V  I  T  T  G  P  G  S  A  S  P  Q  G  R  G
                    Query_5781   1    ACCCTGTCCCT-ACCTGCACTGTCTCTGGTGACTCCATCACCAATAGTAATTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  89
V  94.8% (237/250)  IGHV4-39*01  49   ...........C...................G........G..G.....G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                        W  S  G  L  R  V  S  I  I  V  G  A  P  T  T  T  R  P  S  R  V  E  S  P  Y  P  W  T  R  P
                    Query_5781   90   CTGGAGTGGATTGCGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  179
V  94.8% (237/250)  IGHV4-39*01  139  .............G..................................................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                        R  T  S  S  P  *  G  *  P  L  *  P  P  Q  T  R  L  Y  I  T  V  R  D  D  *  L  Y  P  R  P
                    Query_5781   180  AAGAACCAGTTCTCCCTGAGGGTGACCTCTGTGACCGCCGCAGACACGGCTCTATATTACTGTGCGAGACGATTAGCTGTATCCGCGCCC  269
V  94.8% (237/250)  IGHV4-39*01  229  ...................A.C...G.........................G.G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-15*01  19   -------------------------------------------------------------------------......-----------  24

                                      -------------->                                  
                                        T  T  L  T  T  G  A  R  D  P  W  S  P  S  P  Q 
                    Query_5781   270  TACTACTTTGACTACTGGGGCCAGGGATCCCTGGTCGCCGTCTCCTCAG  318
J  95.8% (46/48)    IGHJ4*02     1    -..........................A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_231588

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     5e-95
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCTACGAGGGGAGTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGAAAAGATATCTACGAGGGGAGTCATCAATATAGTGGCTACATGATTAATGACTTC	GKDIYEGSHQYSGYMINDF	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5782   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAGCAGATATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-23*01  47   .....................C........................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  G  I  N  E  S  G  G  S  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5782   91   ATTGGGTCTCAGGTATTAATGAGAGTGGTGGTAGTACATTTTACGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAATTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  .G..........C.....G..GT...........C....AC.......................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  I  G  L  R  V  D  D  T  A  V  Y  Y  C  G  K  D  I  Y  E  G  S  H  
                    Query_5782   181  AGAACACGCTGTATCTGCAAATGATCGGCCTGAGAGTCGACGACACGGCCGTATATTACTGTGGAAAAGATATCTACGAGGGGAGTCATC  270
V  93.2% (233/250)  IGHV3-23*01  227  ........................A.A.........C...G......................CG.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5782   271  AATATAGTGGCTACATGATTAATGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  97.6% (40/41)    IGHJ4*02     8    ----------------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_231589

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            355     3e-100
IGHD1-1*01                                                                                            14.1    8.3   
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-1*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	CGACATGGC	TACAACT	T	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATCGACATGGCTACAACTTTGATGCTTTTGATATT	VKDRHGYNFDAFDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	251	9	7	2	0	77.8
Total	N/A	N/A	251	239	12	0	95.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  V  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  L  G  K  G  L  
                    Query_5783  1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCTGGGGAAGGGCCTGG  90
V  95.2% (239/251)  IGHV3-9*01  47   ........................C..................................................CA.............  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  V  S  W  N  S  D  N  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5783  91   AGTGGGTCTCAGGTGTTAGTTGGAACAGTGATAACATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (239/251)  IGHV3-9*01  137  ..............A..........T....G..G........................................................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                     N  N  S  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  D  R  H  G  Y  N  F  
                    Query_5783  181  ACAACTCCCTGCATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTATATTACTGTGTGAAAGATCGACATGGCTACAACTTTG  270
V  95.2% (239/251)  IGHV3-9*01  227  .G.........T........................................G..........CA......-------------------  297
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (7/7)     IGHD1-1*01  3    --------------------------------------------------------------------------------.......---  9
J  98.0% (49/50)    IGHJ3*02    1    ----------------------------------------------------------------------------------------..  2

                                     ------------->                                  
                                     D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5783  271  ATGCTTTTGATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  318
J  98.0% (49/50)    IGHJ3*02    3    .............C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_231584

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            302     3e-84
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ6*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGTG	GCAGTGGATGG	ATA	ATGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGTGGCAGTGGATGGATAATGGCCGTG	AGGSGWIMAV	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	219	26	0	89.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  S  T  F  R  N  F  W  M  S  W  V  R  Q  I  P  G  K  G  L  
                    Query_5784   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATCCACATTTAGAAACTTTTGGATGAGTTGGGTCCGCCAGATCCCAGGGAAGGGTCTGG  90
V  89.4% (219/245)  IGHV3-7*03   47   .................................T...C.....T.G..A.........C............GCT...........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  M  A  D  I  N  E  D  G  S  E  I  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  D  
                    Query_5784   91   AGTGGATGGCCGACATAAACGAAGATGGAAGTGAGATAAACTATGTAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGACA  180
V  89.4% (219/245)  IGHV3-7*03   137  .....G.....A.......GC...............A.T.......G........................................C..  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  V  D  L  Q  M  N  S  L  R  V  E  D  S  A  V  Y  Y  C  A  G  G  S  G  W  I  M  A  
                    Query_5784   181  AAAATTCAGTGGATCTGCAGATGAACAGCCTGAGAGTCGAGGACTCGGCCGTGTATTATTGTGCGGGTGGCAGTGGATGGATAATGGCCG  270
V  89.4% (219/245)  IGHV3-7*03   227  .G..C...C..T.......A................C.......A.............C......-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.9% (10/11)    IGHD6-19*01  8    ---------------------------------------------------------------------.......C...----------  18
J  88.1% (37/42)    IGHJ6*02     21   -----------------------------------------------------------------------------------....A..  27

                                      ->                                 
                                      V  W  G  Q  G  A  P  V  P  V  S  S 
                    Query_5784   271  TGTGGGGCCAAGGGGCCCCGGTCCCCGTCTCCTCA  305
J  88.1% (37/42)    IGHJ6*02     28   .C............A..A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_231585

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           392     2e-111
IGHD3-10*01                                                                                           12.2    36    
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TCGGGG	TCTTTGGTCCGGCGAACAGGGA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGGGTCTTTGGTCCGGCGAACAGGGATACTTTGACTTC	ARDRGLWSGEQGYFDF	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  L  K  V  S  C  K  A  S  G  G  A  F  S  T  Y
                    Query_5785   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGCTGAAGGTCTCCTGCAAGGCTTCTGGAGGCGCCTTCAGCACCTA  90
V  93.1% (271/291)  IGHV1-69*01  6    ..................G...........................G.............................A.........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  S  W  V  R  Q  A  P  G  H  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  N  Y  A  N
                    Query_5785   91   TGCTGTCAGCTGGGTGCGACAGGCCCCTGGACACGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACCACAAACTACGCAAA  180
V  93.1% (271/291)  IGHV1-69*01  96   ....A............................A.........................................AG...........C.  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        D  F  R  G  R  L  T  I  I  A  D  G  S  T  S  T  A  Y  M  E  L  T  S  L  R  S  E  D  T  A
                    Query_5785   181  TGACTTCCGGGGCAGACTCACGATTATCGCGGACGGATCCACGAGCACAGCCTACATGGAGCTGACCAGCCTCAGATCTGAGGACACGGC  270
V  93.1% (271/291)  IGHV1-69*01  186  GA.G....A.......G.........C........A.............................G......G.................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  D  R  G  L  W  S  G  E  Q  G  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S
                    Query_5785   271  CGTCTATTATTGTGCGAGAGATCGGGGTCTTTGGTCCGGCGAACAGGGATACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTC  360
V  93.1% (271/291)  IGHV1-69*01  276  ...G.....C...........---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-10*01  14   ---------------------......---------------------------------------------------------------  19
J  97.8% (45/46)    IGHJ4*02     3    -------------------------------------------------..........A..............................  43

                                           
                                        S  
                    Query_5785   361  CTCAG  365
J  97.8% (45/46)    IGHJ4*02     44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_231586

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           316     2e-88
IGHD3-3*01                                                                                            14.1    8.1  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TGC	GGAGTGG	ACTTATG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGCGGAGTGGACTTATGGACTCC	ARLRSGLMDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	13	8	0	61.9
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  I  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  N  G 
                    Query_5786   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAACATTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCGGGGAACGGA  90
V  90.4% (226/250)  IGHV4-39*01  49   ...............................G........G..G..G.................................A.....G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  V  S  S  S  G  N  T  Y  Y  N  P  S  L  K  R  R  V  T  V  S  V  D  T  S 
                    Query_5786   91   CTGGAGTGGCTTGGGAGTGTCTCGAGCAGTGGTAACACCTACTACAACCCGTCCCTCAAGCGTCGGGTCACCGTATCCGTAGACACGTCC  180
V  90.4% (226/250)  IGHV4-39*01  139  .........A........A...ATTAT.....G.G.........................A....A......A.................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       N  H  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  R  S  G  L  M  D 
                    Query_5786   181  AATCATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTTCTGTGCGAGACTGCGGAGTGGACTTATGGAC  270
V  90.4% (226/250)  IGHV4-39*01  229  ..GA.C.............A......................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   15   -------------------------------------------------------------------------.......----------  21
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5786   271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_231587

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           341     5e-96
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	230	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5787   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.0% (230/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  L  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5787   91   TGGATTGGGTATATCCTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.0% (230/242)  IGHV4-59*01  139  ...............TAT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_5787   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  95.0% (230/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5787   271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_231580

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           313     1e-87
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGACTAG	TGGAACGAC	TCTTGTGT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGACTAGTGGAACGACTCTTGTGTACTGGTTCGACCCC	ARTSGTTLVYWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	220	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  N  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  Q  L  E 
                    Query_5788   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAATACCTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAACAACTGGAG  90
V  91.7% (220/240)  IGHV4-59*08  49   ..................A.....................G..GT...................................GGG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  T  T  Y  S  P  S  L  K  S  R  V  T  M  S  I  D  T  S  K  N 
                    Query_5788   91   TGGATTGGTTATATCTCTTACAGTGGGAGCACCACTTATAGCCCCTCCCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCCAAGAAC  180
V  91.7% (220/240)  IGHV4-59*08  139  ........G.......A.................AC..C.A...........................A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  T  S  G  T  T  L  V  Y  W 
                    Query_5788   181  CAGTTCTCCCTGAGGCTGACGTCTGTGACCGCCGCAGACACGGCCATTTATTACTGTGCGCGGACTAGTGGAACGACTCTTGTGTACTGG  270
V  91.7% (220/240)  IGHV4-59*08  229  .............A.....GC........................G.G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD1-1*01   9    --------------------------------------------------------------------.........-------------  17
J  95.8% (46/48)    IGHJ5*02     4    -------------------------------------------------------------------------------------.....  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  I  L  V  A  V  S  S  
                    Query_5788   271  TTCGACCCCTGGGGCCAGGGAATCCTGGTCGCCGTCTCCTCAG  313
J  95.8% (46/48)    IGHJ5*02     9    ......................C.......A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_231581

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     4e-93
IGHD2-21*02                                                                                           18.0    0.61 
IGHJ1*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTCACAGTATTGTGGCGC	TGGCGACTGCTA	CGCCTCC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCACAGTATTGTGGCGCTGGCGACTGCTACGCCTCCGCTGAGTACTTCCAGCAC	ARHSQYCGAGDCYASAEYFQH	239	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	28	26	21	5	0	80.8
CDR1-IMGT	29	52	24	23	1	0	95.8
FR2-IMGT	53	103	51	49	2	0	96.1
CDR2-IMGT	104	124	21	20	1	0	95.2
FR3-IMGT	125	238	114	107	7	0	93.9
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_5789   3    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAGT  92
V  93.4% (228/244)  IGHV4-59*08  50   .....TCC...A....C...........................T..........C.................A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N  
                    Query_5789   93   GGATTGGGTATATCTATTCCAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGTTAGACACGTCCAAGAACC  182
V  93.4% (228/244)  IGHV4-59*08  140  ..................A...............C...................................AG..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------------CDR3-IM
                                      H  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  S  Q  Y  C  G  A  G  D  
                    Query_5789   183  ACTTCTCCCTGACCCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATTCACAGTATTGTGGCGCTGGCGACT  272
V  93.4% (228/244)  IGHV4-59*08  230  .G..........AG....G.............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  91.7% (11/12)    IGHD2-21*02  13   ----------------------------------------------------------------------------------...T....  20

                                      GT-------------------------->                                  
                                      C  Y  A  S  A  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5789   273  GCTACGCCTCCGCTGAGTACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  335
D  91.7% (11/12)    IGHD2-21*02  21   ....-----------------------------------------------------------  24
J  96.2% (50/52)    IGHJ1*01     1    -----------.....A.........................................C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_231582

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            410     1e-116
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGTGAGGAACCAGCTCGTATCCGACTTC	ARAVRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  S  Y
                    Query_5790  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCAGCAGTTA  90
V  95.2% (276/290)  IGHV1-8*01  6    ..................G................................................................C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  E
                    Query_5790  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCAGA  180
V  95.2% (276/290)  IGHV1-8*01  96   ........A.........................................................C.....................C.  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  G  D  T  S  I  T  T  A  Y  M  E  M  S  S  L  N  S  E  D  T  A
                    Query_5790  181  GAAGTTCCAGGGCAGAGTCACCATGACCGGGGACACTTCCATAACCACAGCCTACATGGAGATGAGCAGCCTAAACTCTGAAGACACGGC  270
V  95.2% (276/290)  IGHV1-8*01  186  ............................A..A....C.......G................C..........G.GA.....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  V  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5790  271  CGTGTATTACTGTGCGAGAGCGGTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.2% (276/290)  IGHV1-8*01  276  ....................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_191783

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           374     8e-106
IGHD3-10*01                                                                                           14.1    9.4   
IGHJ4*01                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CCCAA	ATTACTTGGGTTC	CCAGCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACACCCAAATTACTTGGGTTCCCAGCCATTTGACTCC	ARHPNYLGSQPFDS	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	265	26	0	91.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  H  S  F  I  G  H
                    Query_5791   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCCCTGAAGATCTCCTGTAAGGGTTCCGGACACAGTTTTATCGGCCA  90
V  91.1% (265/291)  IGHV5-51*01  6    ....................................C........T.......................T...T....C....C.A..T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  M  I  Y  F  D  D  S  D  T  R  Y  S  P
                    Query_5791   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGAAAAGGCCTGGAGTGGATGGGGATGATATATTTTGACGACTCTGATACAAGATACAGTCC  180
V  91.1% (265/291)  IGHV5-51*01  96   ..............................G.......................C..C...CC..GT...........C........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  V  Y  L  Q  W  S  S  L  R  A  S  D  T  A
                    Query_5791   181  GTCCTTCGAGGGCCAGGTCACCATCTCCGCCGACAAGTCCATCAGTACCGTCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACACTGC  270
V  91.1% (265/291)  IGHV5-51*01  186  .......C.A.................A.................C....C.......................A............C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  F  C  A  R  H  P  N  Y  L  G  S  Q  P  F  D  S  W  G  H  G  T  L  V  T  V  S  S  
                    Query_5791   271  CATGTATTTCTGTGCCAGACACCCAAATTACTTGGGTTCCCAGCCATTTGACTCCTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  359
V  91.1% (265/291)  IGHV5-51*01  276  ........A......G.....--------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                       
D  84.6% (11/13)    IGHD3-10*01  3    --------------------------......AT.....--------------------------------------------------  15
J  95.3% (41/43)    IGHJ4*01     6    ----------------------------------------------.......A.........A.........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_32200

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           338     4e-95
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	107	7	0	93.9
Total	N/A	N/A	242	229	13	0	94.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  G  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5792   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACGTTGAGTGGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.6% (229/242)  IGHV3-33*03  47   .....................................C..C...A.C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_5792   91   AGTGGGTGGCAGTTATATGGTATGATGGAATTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCA  180
V  94.6% (229/242)  IGHV3-33*03  137  ..............................G....................................................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_5792   181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCG  270
V  94.6% (229/242)  IGHV3-33*03  227  .......G....A......A..............................G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  90.9% (10/11)    IGHD6-13*01  7    -------------------------------------------------------------------....G......------------  17
J  100.0% (46/46)   IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5792   271  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (46/46)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_273164

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           361     4e-102
IGHD3-3*01                                                                                            41.1    7e-08 
IGHJ3*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTCGCCAA	ATTACGATTTCTGGAATGGTTATTATA	TTACCAAAAAAGGA	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCGCCAAATTACGATTTCTGGAATGGTTATTATATTACCAAAAAAGGAGCTTTTGATATC	ARESPNYDFWNGYYITKKGAFDI	240	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	239	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5793   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  96.8% (239/247)  IGHV3-53*01  47   .........................................................G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  D  N  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_5793   91   AGTGGGTCTCAGTTATTTATAGCGGTGATAACACAGACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGGGACAATTCCAAGA  180
V  96.8% (239/247)  IGHV3-53*01  137  ...........................G..G....T........................................A.............  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------------C
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  S  P  N  Y  D  F  W  
                    Query_5793   181  ACACGCTGTATCTTCAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAGAGAGTCGCCAAATTACGATTTCTGGA  270
V  96.8% (239/247)  IGHV3-53*01  227  ................A................................G.................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  92.6% (25/27)    IGHD3-3*01   3    ---------------------------------------------------------------------------..........T....  17

                                      DR3-IMGT----------------------------->                                  
                                      N  G  Y  Y  I  T  K  K  G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5793   271  ATGGTTATTATATTACCAAAAAAGGAGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  342
D  92.6% (25/27)    IGHD3-3*01   18   G...........------------------------------------------------------------  29
J  100.0% (46/46)   IGHJ3*02     5    --------------------------..............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_273165

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  G  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_5794   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGGGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.5% (278/291)  IGHV5-51*01  6    ............................AA...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_5794   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_5794   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  .......C.....................................C...........G......A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_5794   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_5794   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_273166

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTA	ACGATTT	ACATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACGATTTACATTATGGTATGGACGTC	ARVNDLHYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  Y  P  G  K  G 
                    Query_5795   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATTCGCCAGTACCCAGGGAAGGGC  90
V  97.2% (243/250)  IGHV4-31*03  49   ...................C................................................C......C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  V  G  Y  M  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_5795   91   CTGGAGTGGGTTGGGTACATGTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.2% (243/250)  IGHV4-31*03  139  .........A..........C.....................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  H  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  D  L  H  Y  G 
                    Query_5795   181  AAGCACCAGCTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTTAACGATTTACATTATGGT  270
V  97.2% (243/250)  IGHV4-31*03  229  ...A.....T............................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   6    -------------------------------------------------------------------------.......----------  12
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5795   271  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  312
J  100.0% (45/45)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_273167

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           405     4e-115
IGHD2-2*02                                                                                            10.3    139   
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGT	CTATA	TCGACTTTCATT	TACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCTATATCGACTTTCATTTACCACTACGGTATGGACGTC	ARGSISTFIYHYGMDV	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	277	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  T  A  S  G  Y  T  F  K 
                    Query_5796   3    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCACGGCTTCTGGTTACACCTTTAAG  92
V  93.9% (277/295)  IGHV1-18*01  1    .....T.....G.......................................................A....................CC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  M  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  T  A  Y  N  G  K  R  D  Y 
                    Query_5796   93   AACTATGGTATCATGTGGGTGCGACAGGCCCCTGGACAAGGGCTGGAGTGGATGGGCTGGATCACCGCTTACAATGGTAAAAGAGACTAT  182
V  93.9% (277/295)  IGHV1-18*01  91   .G...........GC.............................T...........A.......G...............C.C.A.....  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_5796   183  TCACAGAAACTCCAGGGCAGAGTCACCATGACCACGGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  272
V  93.9% (277/295)  IGHV1-18*01  181  G.......G..........................A......................................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  G  S  I  S  T  F  I  Y  H  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_5796   273  ACGGCCGTCTATTACTGTGCGAGAGGGTCTATATCGACTTTCATTTACCACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACC  362
V  93.9% (277/295)  IGHV1-18*01  271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD2-2*02   25   ----------------------------.....---------------------------------------------------------  29
J  98.1% (53/54)    IGHJ6*02     9    ---------------------------------------------...T.........................................  53

                                               
                                       V  S  S 
                    Query_5796   363  GTCTCCTCA  371
J  98.1% (53/54)    IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_273161

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           325     3e-91
IGHD2-21*01                                                                                           25.7    0.003
IGHJ2*01                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCCAGCTATTTTGTA	GTGGTGGTGCTTGCTA	CGGGGACAAAAGGAG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCCAGCTATTTTGTAGTGGTGGTGCTTGCTACGGGGACAAAAGGAGCTGGTACTTCGATCTC	ARAQLFCSGGACYGDKRSWYFDL	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	30	23	1	6	76.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	248	230	12	6	92.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N        Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_5797   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAAT------TACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  84
V  92.7% (230/248)  IGHV4-39*01  49   ..............................................G.AGTTAC....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  Q  W  I  G  S  I  Y  Y  S  G  D  T  F  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_5797   85   CTGCAATGGATTGGGAGTATCTATTATAGTGGTGACACCTTCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  174
V  92.7% (230/248)  IGHV4-39*01  139  ...G.G..........................GAG.....A.................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  K  Q  F  S  L  K  L  S  S  A  T  A  T  D  T  A  V  Y  F  C  A  R  A  Q  L  F  C  S  G 
                    Query_5797   175  AAGAAGCAGTTCTCCCTGAAGCTGAGCTCTGCGACCGCCACAGACACGGCTGTTTATTTCTGTGCGAGGGCCCAGCTATTTTGTAGTGGT  264
V  92.7% (230/248)  IGHV4-39*01  229  .....C.........................T.......G.............G....A.........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  93.8% (15/16)    IGHD2-21*01  9    -------------------------------------------------------------------------------------.....  13

                                      ---CDR3-IMGT----------------------------->                                  
                                       G  A  C  Y  G  D  K  R  S  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_5797   265  GGTGCTTGCTACGGGGACAAAAGGAGCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  340
D  93.8% (15/16)    IGHD2-21*01  14   ....A......-----------------------------------------------------------------  24
J  100.0% (50/50)   IGHJ2*01     4    --------------------------..................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_273162

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           311     4e-87
IGHD3-10*01                                                                                           16.1    2.1  
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	TCGGAGA	TCGGGGAG	N/A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCATCGGAGATCGGGGAGGATGCTTTTGATATC	ASEIGEDAFDI	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	22	24	3	3	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	123	24	21	3	0	87.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	219	209	10	0	95.4


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  V  T  L  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  N  S  D 
                    Query_5798   22   TCTGGAGTCACCCTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGCATTAACAGTGAT  111
V  95.4% (209/219)  IGHV3-74*01  73   ......T.....T................................................................T.....T......  162
                                       S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  N  S  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  S  R  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N 
                    Query_5798   112  GGGAGTAGAATAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTTCAAATGAAC  201
V  95.4% (209/219)  IGHV3-74*01  163  ........C.C..G..................................................................G.........  252
                                       G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><-----------CDR3-IMGT----------->                     
                                       S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  E  I  G  E  D  A  F  D  I  W  G  Q  G  T  M  V 
                    Query_5798   202  AGTCTGAGAGTCGAAGACACGGCTGTGTATTACTGTGCATCGGAGATCGGGGAGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTC  291
V  95.4% (209/219)  IGHV3-74*01  253  ..........C...G........................---------------------------------------------------  291
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                    
D  100.0% (8/8)     IGHD3-10*01  14   ----------------------------------------------........------------------------------------  21
J  98.0% (48/49)    IGHJ3*02     2    ------------------------------------------------------....................................  37

                                                   
                                       T  V  S  S  
                    Query_5798   292  ACCGTCTCATCAG  304
J  98.0% (48/49)    IGHJ3*02     38   ........T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_273163

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43D*01                                                                                          324     8e-91
IGHD2-21*01                                                                                           14.1    8.7  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43D*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCTAA	GTCTCTACGTCGCTTA	GGTGATT	CTCCTCGACGATCAC	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAAGTCTCTACGTCGCTTAGGTGATTCTCCTCGACGATCACACGGTATGGACGTC	AKSLRRLGDSPRRSHGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  Y  W  V  R  Q  G  P  G  K  G  L  
                    Query_5799    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTACGCCATGTACTGGGTCCGTCAAGGTCCGGGGAAGGGTCTGG  90
V  91.9% (227/247)  IGHV3-43D*01  47   .................................................T......C...............C.................  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  S  L  I  S  W  D  A  T  T  A  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  K  R  
                    Query_5799    91   AGTGGGTCTCTCTTATTAGTTGGGATGCCACTACCGCATACTACGCAGACTCTGTGAAGGGTCGATTCACCATCTCCAGAGACAAGAGAA  180
V  91.9% (227/247)  IGHV3-43D*01  137  ...........................GTGG..G.A.C.....T.........................................C..C.  226
                                       E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                       K  N  S  L  Y  L  Q  M  N  S  L  G  P  D  D  T  A  L  Y  Y  C  A  K  S  L  R  R  L  G  D  
                    Query_5799    181  AAAACTCCCTGTATTTGCAAATGAACAGTCTGGGACCTGACGACACCGCCTTATATTACTGCGCTAAGTCTCTACGTCGCTTAGGTGATT  270
V  91.9% (227/247)  IGHV3-43D*01  227  ..............C.................A..G....G...........G........T..A..-----------------------  293
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-21*01   14   -----------------------------------------------------------------------------------.......  20

                                       -IMGT----------------------->                                 
                                       S  P  R  R  S  H  G  M  D  V  W  G  R  G  T  T  V  I  V  S  S 
                    Query_5799    271  CTCCTCGACGATCACACGGTATGGACGTCTGGGGCCGAGGGACCACGGTCATTGTCTCCTCA  332
J  93.6% (44/47)    IGHJ6*02      16   ---------------.....................A..............CC.........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_273168

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           343     2e-96
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5800   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (232/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_5800   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  H  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_5800   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTACATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  94.7% (232/245)  IGHV4-59*01  229  .........C....G.....C..........................GT..........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_5800   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_122763

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           380     1e-107
IGHD3-9*01                                                                                            12.2    33    
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAG	GACTGG	CTGATTCCTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGACTGGCTGATTCCTTACTACTTTGACTTC	ARAKDWLIPYYFDF	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	24	0	0	100
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	109	5	0	95.6
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	255	12	0	95.5


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  N  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  
                    Query_5801   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCAACTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGTTGGATCCGGC  90
V  95.5% (255/267)  IGHV4-59*01  26   ................T...................C..........................................C..........  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  N  I  Y  H  S  G  G  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_5801   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGCAATATCTATCACAGTGGGGGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  95.5% (255/267)  IGHV4-59*01  116  ...............................GT........T........A.......................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  E  V  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  A  
                    Query_5801   181  TATCAGTGGACACGTCCAAGAACCAGTTCTCCCTGGAGGTGAGCTCTGTGACCGCTGCGGACACGGCCATTTATTACTGTGCGAGAGCTA  270
V  95.5% (255/267)  IGHV4-59*01  206  .......A...........................A..C.............................G.G................---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -------CDR3-IMGT--------------->                                  
                                      K  D  W  L  I  P  Y  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5801   271  AGGACTGGCTGATTCCTTACTACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  100.0% (6/6)     IGHD3-9*01   16   --......----------------------------------------------------------  21
J  97.9% (47/48)    IGHJ4*02     1    ------------------............A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_106994

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           350     8e-99
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCT	GTGGCTGG	AAAAGCAGTCCG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTGTGGCTGGAAAAGCAGTCCGTGATGCTTTTGATATC	ARSVAGKAVRDAFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5802   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-30*04  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  H  K  Y  Y  A  D  S  V  K  G  R  L  T  V  S  R  D  N  S  
                    Query_5802   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTCATAAATACTATGCAGACTCCGTGAAGGGCCGACTCACCGTCTCCAGAGACAATTCCG  180
V  95.2% (236/248)  IGHV3-30*04  137  ................................A..........C.....................T.....A.................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  T  L  Y  V  Q  V  N  S  L  R  P  E  D  T  A  M  Y  Y  C  A  R  S  V  A  G  K  A  V  
                    Query_5802   181  AGAACACGCTCTATGTGCAAGTGAACAGCCTGAGACCTGAGGACACGGCTATGTATTACTGTGCGAGATCTGTGGCTGGAAAAGCAGTCC  270
V  95.2% (236/248)  IGHV3-30*04  227  ..........G...C.....A..............G..............G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18

                                      ---------------->                                
                                      R  D  A  F  D  I  W  G  R  G  T  V  V  I  V  S  S
                    Query_5802   271  GTGATGCTTTTGATATCTGGGGCCGAGGGACAGTGGTCATCGTGTCTTC  319
J  91.7% (44/48)    IGHJ3*02     1    -.......................A.......A......C...C.....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_348326

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           319     2e-89
IGHD3-16*01                                                                                           35.3    4e-06
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCG	TATGATTACGTTTGGGGG	GCCTACCGGTGGCACAAGGCC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCGTATGATTACGTTTGGGGGGCCTACCGGTGGCACAAGGCCTTTGATATC	ARDSYDYVWGAYRWHKAFDI	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  D  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5803   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTCAGTGATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-48*03  47   ....................................CC......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  G  S  F  T  T  M  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_5803   91   AGTGGCTTTCATACATTAGTGGTAGTTTCACTACCATGTTTTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  90.8% (227/250)  IGHV3-48*03  137  .....G..............A.....GGT.G......A.AC.............................................G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  K  T  L  F  L  E  M  N  N  L  T  V  E  D  T  A  V  Y  F  C  A  R  D  S  Y  D  Y  V  W  
                    Query_5803   181  AGAAAACGCTGTTTCTGGAAATGAACAACCTGACAGTCGAGGACACGGCTGTTTATTTCTGTGCGAGAGATTCGTATGATTACGTTTGGG  270
V  90.8% (227/250)  IGHV3-48*03  227  ....CT.A....A....C.........G.....G..C....................A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-16*01  5    --------------------------------------------------------------------------................  20

                                      R3-IMGT------------------------>                                  
                                      G  A  Y  R  W  H  K  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5803   271  GGGCCTACCGGTGGCACAAGGCCTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
D  100.0% (18/18)   IGHD3-16*01  21   ..----------------------------------------------------------------  22
J  100.0% (43/43)   IGHJ3*02     8    -----------------------...........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_106996

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	221	24	6	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  E  K  G 
                    Query_5804   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGAGAAGGGC  90
V  88.0% (221/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C....G......G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_5804   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.0% (221/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_5804   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.0% (221/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_5804   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_106997

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           307     1e-85
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	220	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5805   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  90.2% (220/244)  IGHV4-59*01  49   .............................T........C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_5805   91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  90.2% (220/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P 
                    Query_5805   181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC  270
V  90.2% (220/244)  IGHV4-59*01  229  ...........G...C....C...........T............G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  95.7% (44/46)    IGHJ5*02     6    ------------------------------------------------------------------------------............  17

                                                                        
                                       W  G  Q  G  A  L  V  S  V  S  S  
                    Query_5805   271  TGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  304
J  95.7% (44/46)    IGHJ5*02     18   ............A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_319858

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           329     3e-92
IGHD5-18*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	CTTAC	GTGGATTCGCCTATGGTT	CAC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGGACTTACGTGGATTCGCCTATGGTTCACTTGAGTTC	AKDLRGFAYGSLEF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  V  
                    Query_5806   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTACACCATGCACTGGGTCCGTCAAGCTCCGGGCAAGGGTGTGG  90
V  92.0% (230/250)  IGHV3-43*01  47   .................................................T.............................G......C...  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  L  T  W  D  G  T  R  T  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  
                    Query_5806   91   AATGGGTCTCTCTTCTTACTTGGGATGGGACTAGAACATACTATGCGGACTCTGTGAAGGGCCGATTCATCATCTCCAGAGACAAGAGCA  180
V  92.0% (230/250)  IGHV3-43*01  137  .G............A...G.........TGG...C...........A......................C...............C....  226
                                      E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  K  S  L  F  L  Q  M  N  S  L  R  P  E  D  S  A  L  Y  Y  C  A  K  D  L  R  G  F  A  Y  
                    Query_5806   181  AAAAATCACTGTTTCTGCAAATGAACAGTCTGAGACCTGAGGACAGCGCCTTATATTACTGTGCAAAGGACTTACGTGGATTCGCCTATG  270
V  92.0% (230/250)  IGHV3-43*01  227  ....C..C....A......................A.........C......G..............A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A  K                       
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------------------------......A.AG.....  15

                                      ------------->                                  
                                      G  S  L  E  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5806   271  GTTCACTTGAGTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  83.3% (15/18)    IGHD5-18*01  16   ...---------------------------------------------  18
J  95.2% (40/42)    IGHJ4*02     7    ------....C.A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_106991

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            427     1e-121
IGHD3-3*01                                                                                            19.9    0.18  
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGCCGGTCCTA	TTTTGGAGTG	ATACGAGAGCGGTGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGCCGGTCCTATTTTGGAGTGATACGAGAGCGGTGTTACTTTGACTAC	ARCRSYFGVIRERCYFDY	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_5807  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  97.2% (281/289)  IGHV1-2*04  6    ..................G.......................................................................  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  N  G  D  T  H  Y  A  L
                    Query_5807  91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAATGGTGACACACATTATGCACT  180
V  97.2% (281/289)  IGHV1-2*04  96   ....................................................................G.....G....A.C.......A  185
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       E  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  K  S  D  D  T  A
                    Query_5807  181  GGAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAAATCTGACGACACGGC  270
V  97.2% (281/289)  IGHV1-2*04  186  .A........................................................................G...............  275
                                       K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                     ------------><----------------------CDR3-IMGT--------------------->                       
                                       V  Y  Y  C  A  R  C  R  S  Y  F  G  V  I  R  E  R  C  Y  F  D  Y  W  G  Q  G  T  L  V  T
                    Query_5807  271  CGTGTATTACTGTGCGAGATGCCGGTCCTATTTTGGAGTGATACGAGAGCGGTGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCAC  360
V  97.2% (281/289)  IGHV1-2*04  276  ...................-----------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD3-3*01  11   ------------------------------..........--------------------------------------------------  20
J  100.0% (46/46)   IGHJ4*02    3    -------------------------------------------------------...................................  37

                                                
                                       V  S  S  
                    Query_5807  361  CGTCTCCTCAG  371
J  100.0% (46/46)   IGHJ4*02    38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_348321

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GTCCTGGGTACTCT	GGAGTT	GC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCCTGGGTACTCTGGAGTTGCCTTTGACCAC	ARRPGYSGVAFDH	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  D  F  I  S  T  Y  Y  W  N  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_5808   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGACTTCATCAGTACTTATTATTGGAATTGGATTCGGCAGGCCCCAGGGAAGGGACTGGAG  90
V  92.2% (225/244)  IGHV4-59*08  49   ...................C...........G..C........G...C..C....GC.....C......C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  D  T  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_5808   91   TGGATTGGGTATATCTACTACAGTGGGAGCACCGACACCAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .................T...............A..TA..............................A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  P  G  Y  S  G  V  A  F 
                    Query_5808   181  CAATTCTCCCTGAAGTTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACGTCCTGGGTACTCTGGAGTTGCCTTT  270
V  92.2% (225/244)  IGHV4-59*08  229  ..G............C....C..........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-10*01  18   ------------------------------------------------------------------------------......------  23
J  93.2% (41/44)    IGHJ4*02     5    --------------------------------------------------------------------------------------....  8

                                      ----->                                  
                                       D  H  W  G  Q  G  K  L  V  T  V  S  S  
                    Query_5808   271  GACCACTGGGGCCAGGGAAAACTGGTCACCGTCTCCTCAG  310
J  93.2% (41/44)    IGHJ4*02     9    ...T...............CC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_106993

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           213     2e-57
IGHD3-16*01                                                                                           25.7    0.003
IGHJ3*01                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ3*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACCTAT	GTTTGGGGGAGTT	TACGCCGCAATCACGATTGCCTTAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACCTATGTTTGGGGGAGTTTACGCCGCAATCACGATTGCCTTACTGTC	ARGLLIEDPTYVWGSLRRNHDCLTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	35	16	0	68.6
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	87	27	0	76.3
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	190	54	0	77.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  V  R  Q  P  P  G  G  G  L  Q 
                    Query_5809   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGAACTTACTACTGGCACTGGGTGCGGCAACCTCCAGGGGGGGGTCTGCAG  90
V  77.9% (190/244)  IGHV4-59*01  49   .......................C.......G.......A.T.G..........AG....A.C.....G..C......AA...A...G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  A  M  F  L  S  T  G  T  T  L  Y  N  P  S  V  R  G  R  V  T  V  S  G  D  M  S  R  N 
                    Query_5809   91   TGGCTTGCCATGTTCTTATCCACTGGGACCACCCTCTACAACCCCTCCGTCAGGGGTCGTGTCACCGTGTCGGGCGACATGTCTCGGAAT  180
V  77.9% (190/244)  IGHV4-59*01  139  ...A...GGTATA...AT.A..G.....G....AA.............C...A.A....A......A.A..A.TA....C...CAA...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_5809   181  CAGTTGTCCCTCAACCTCATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACCTAT  270
V  77.9% (190/244)  IGHV4-59*01  229  .....C.....G..G..G.G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  L  R  R  N  H  D  C  L  T  V  W  G  *  G  T  P  V  T  V  S  S  
                    Query_5809   271  GTTTGGGGGAGTTTACGCCGCAATCACGATTGCCTTACTGTCTGGGGCTAGGGGACACCGGTCACCGTCTCTTCAG  346
D  100.0% (13/13)   IGHD3-16*01  14   .............---------------------------------------------------------------  26
J  89.5% (34/38)    IGHJ3*01     13   --------------------------------------..........C.A......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_106999

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           260     1e-71
IGHD6-13*01                                                                                           12.2    30   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGACACTCCAC	TATAGC	CT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGACACTCCACTATAGCCTCTTTGACCTC	ARGTLHYSLFDL	230	265	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	48	3	0	94.1
CDR2-IMGT	92	115	24	18	6	0	75
FR3-IMGT	116	229	114	100	14	0	87.7
CDR3-IMGT (germline)	230	234	5	5	0	0	100
Total	N/A	N/A	222	194	28	0	87.4


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  R  F  N  N  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  D  W  L  A  V  I  L  S  D
                    Query_5810   13   GTCTGGATTCAGGTTCAATAACTATGCCATGCACTGGGTCCGCCAGGCTCCCGGCAAGGGGCTGGACTGGCTGGCAGTTATATTGTCTGA  102
V  87.4% (194/222)  IGHV3-33*01  72   ...........CC....G..G.....G........................A..............G...G............G..A...  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  S  T  N  Y  L  D  S  V  K  G  R  L  T  I  S  R  D  N  S  K  S  T  L  Y  L  Q  L  N
                    Query_5810   103  TGGCAGCAGTACAAATTATTTAGACTCCGTGAAGGGCCGACTCACCATCTCCAGAGACAATTCCAAGAGCACCCTTTATCTGCAATTGAA  192
V  87.4% (194/222)  IGHV3-33*01  162  ...A..T.A..A.T.C...GC...................T...........................A...G..G.........A....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-------------CDR3-IMGT------------>                 
                                        R  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  T  L  H  Y  S  L  F  D  L  W  G  Q  G  T  L
                    Query_5810   193  CAGACTTAGAGTCGAAGACACGGCTGTCTATTACTGTGCGAGGGGGACACTCCACTATAGCCTCTTTGACCTCTGGGGCCAGGGCACCCT  282
V  87.4% (194/222)  IGHV3-33*01  252  ...C..G....C...G...........G..............------------------------------------------------  293
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                   
D  100.0% (6/6)     IGHD6-13*01  4    -------------------------------------------------------......-----------------------------  9
J  90.9% (40/44)    IGHJ4*02     5    ---------------------------------------------------------------.......TA............A.....  31

                                                       
                                        V  T  V  S  S  
                    Query_5810   283  GGTCACCGTCTCGTCAG  299
J  90.9% (40/44)    IGHJ4*02     32   ............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_348329

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCAC	GTATCACTATGACAATGGTGGTTATT	GGACCGCGGGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCACGTATCACTATGACAATGGTGGTTATTGGACCGCGGGGGCTTTTGATATC	ARTTYHYDNGGYWTAGAFDI	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5811   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCTTGAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (232/243)  IGHV4-59*01  49   ....................................A.C...................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  F  G  F  I  Y  Y  S  G  S  T  T  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_5811   91   TGGTTTGGTTTTATCTATTACAGTGGGAGCACCACCTACAACCCTTCCCTCAGGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAAG  180
V  95.5% (232/243)  IGHV4-59*01  139  ...A....G.A.......................A.........C.......A.....................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  T  Y  H  Y  D  N  G  G 
                    Query_5811   181  CAGTTCTCCCTGAAGCTGAGATCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAACCACGTATCACTATGACAATGGTGGT  270
V  95.5% (232/243)  IGHV4-59*01  229  ....................C..........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (22/26)    IGHD3-22*01  1    --------------------------------------------------------------------....T.......T.G.A.....  22

                                      GT------------------------>                                  
                                       Y  W  T  A  G  A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_5811   271  TATTGGACCGCGGGGGCTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  331
D  84.6% (22/26)    IGHD3-22*01  23   ....---------------------------------------------------------  26
J  97.8% (45/46)    IGHJ3*02     5    ---------------...........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_348328

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD2-21*02                                                                                           18.0    0.58  
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CA	ATTGGGGTGCTGACT	TCAA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTGGGGTGCTGACTTCAAACTACTTTTGCTGC	ARAIGVLTSNYFCC	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  L  R  Q  H  P  G  Q  G 
                    Query_5812   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGCGGTGATTACTACTGGAGCTGGCTCCGCCAGCACCCAGGGCAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ............................................T....G................A.................A.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  A 
                    Query_5812   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGGCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ...............T......A...........................................G....................T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  A  I  G  V  L  T  S 
                    Query_5812   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTTTTACTGTGCGAGAGCAATTGGGGTGCTGACTTCA  270
V  96.4% (241/250)  IGHV4-31*03  229  .......................................................A..............--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.7% (13/15)    IGHD2-21*02  6    ------------------------------------------------------------------------....T....G.....---  20

                                      -------------->                                  
                                       N  Y  F  C  C  W  G  Q  V  T  L  V  T  F  S  S  
                    Query_5812   271  AACTACTTTTGCTGCTGGGGCCAGGTAACCCTGGTCACCTTCTCCTCAG  319
J  89.6% (43/48)    IGHJ4*02     1    -........GA..A...........G.............G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_105821

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           269     2e-74
IGHD3-10*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGGACATGTTAG	GGTTCGGGGA	CTTGGTTCCCCTTGCCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACATGTTAGGGTTCGGGGACTTGGTTCCCCTTGCCCAC	ARDMLGFGDLVPLAH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	209	37	0	85


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  S  Y  A  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5813   1    GGTCCCTGAGACTCTCCTGTGCGGTCTCTGGATTCACCTTTTCCAGTTATGCCATCTCCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  85.0% (209/246)  IGHV3-23*01  47   ......................A.C................AG...C........GAG...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  G  D  S  A  A  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_5813   91   AGTGGGTCTCAGGCATCGGTGACAGCGCTGCCAAGACATATTACGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCCGAGACAGTTCCA  180
V  85.0% (209/246)  IGHV3-23*01  137  ............CT..TA...GT..T.G..GT.GC.....C.......................G............A......A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  M  T  V  Y  L  Q  M  N  S  L  R  P  E  D  T  A  M  Y  F  C  A  R  D  M  L  G  F  G  D  
                    Query_5813   181  GAATGACGGTATATCTGCAAATGAACAGTCTGAGACCCGAAGACACGGCCATGTATTTCTGTGCGAGGGACATGTTAGGGTTCGGGGACT  270
V  85.0% (209/246)  IGHV3-23*01  227  AG.AC...C.G.................C......G....G.........G.A....A........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD3-10*01  11   ------------------------------------------------------------------------------..........--  20

                                      ---------------->                                  
                                      L  V  P  L  A  H  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_5813   271  TGGTTCCCCTTGCCCACTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  321
J  94.4% (34/36)    IGHJ4*02     13   ---------------..............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_344542

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           325     3e-91
IGHD5-12*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGAGTGCCCGGACA	TGGATATAGCGGCTACG	GGTT	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGAGTGCCCGGACATGGATATAGCGGCTACGGGTTCTATTTAGACTAT	ARRVPGHGYSGYGFYLDY	246	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  I  S  S  G  D  Y  Y  W  I  W  I  R  Q  H  P  G  K  G  
                    Query_5814   4    CCCTGAGACTCTCCTGCACTGTCTCCGGTGCCTCCATCAGCAGTGGTGACTACTACTGGATCTGGATCCGCCAGCACCCCGGGAAGGGCC  93
V  91.9% (228/248)  IGHV4-31*03  50   .....TCC...A.............T....G.................GT..........G..................A..........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  D  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  
                    Query_5814   94   TGGACTGGATTGGGTCCATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGCGTTACAATGTCGGTAGACACGTCTA  183
V  91.9% (228/248)  IGHV4-31*03  140  ....G..........A................................................A.....C..A..A.............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  Q  F  S  L  T  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  V  P  G  H  G  Y  
                    Query_5814   184  AGAACCAGTTCTCCCTGACCCTGAACTCTGTGACGGCCGCGGACACGGCCGTGTATTACTGTGCGAGAAGAGTGCCCGGACATGGATATA  273
V  91.9% (228/248)  IGHV4-31*03  230  ..................AG....G.........T.................................----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  94.1% (16/17)    IGHD5-12*01  2    ----------------------------------------------------------------------------------........  9

                                      IMGT--------------------->                                  
                                      S  G  Y  G  F  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5814   274  GCGGCTACGGGTTCTATTTAGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  94.1% (16/17)    IGHD5-12*01  10   .T.......---------------------------------------------------  18
J  93.6% (44/47)    IGHJ4*02     2    -------------...C..T.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_348910

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           374     7e-106
IGHD1-26*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GGGGA	AGTGGGAGCTAC	GAGGGCG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGGGGGAAGTGGGAGCTACGAGGGCGTTGACTAC	ATGGSGSYEGVDY	249	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	112	2	0	98.2
CDR3-IMGT (germline)	249	255	7	6	1	0	85.7
Total	N/A	N/A	255	247	8	0	96.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  F  I  Y  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5815   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCTTTCATTTACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.9% (247/255)  IGHV3-15*01  47   .......T...........................A......G.A.............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  T  N  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_5815   91   AGTGGGTTGGCCGTATTAAAAGCAAAACTAATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  96.9% (247/255)  IGHV3-15*01  137  .............................G............................................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  S  V  Y  Y  C  A  T  G  G  S  G  S  
                    Query_5815   181  ATTCAAAAAACACGCTGTATCTGCAAATGAATAGCCTGAAAACCGAGGACACATCCGTGTATTACTGTGCCACAGGGGGAAGTGGGAGCT  270
V  96.9% (247/255)  IGHV3-15*01  227  ...............................C.....................G..............A......---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (12/12)   IGHD1-26*01  6    --------------------------------------------------------------------------------..........  15

                                      GT-------------->                                  
                                      Y  E  G  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5815   271  ACGAGGGCGTTGACTACTGGGGGCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (12/12)   IGHD1-26*01  16   ..-------------------------------------------------  17
J  97.6% (41/42)    IGHJ4*02     7    ---------.............C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_70216

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD3-16*01                                                                                           12.2    32   
IGHJ1*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCCCCTCTCCAGAA	CTTATA	TTTCGTCCTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCCCCTCTCCAGAACTTATATTTCGTCCTGGTACTTCCAGGAC	AKDPLSRTYISSWYFQD	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  A  M  S  W  V  R  Q  S  P  G  K  G  L  
                    Query_5816   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCGACTATGCCATGAGCTGGGTCCGCCAGTCTCCAGGGAAGGGTCTGG  90
V  90.4% (226/250)  IGHV3-23*01  47   ............................................AG.........................G.............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  A  S  S  G  R  T  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5816   91   AGTGGGTCTCAGCGATCAGTGCTAGTAGTGGTCGCACATACTATGGGGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  90.4% (226/250)  IGHV3-23*01  137  .............T..T....G....G.....A..........C.CA.....C.....................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  D  T  L  F  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  D  P  L  S  R  T  Y  
                    Query_5816   181  GGGACACCCTATTTTTGGAAATGAACAGCCTGCGAGTCGAGGACACGGCCGTCTACTACTGTGCGAAAGATCCCCTCTCCAGAACTTATA  270
V  90.4% (226/250)  IGHV3-23*01  227  A.A....G..G.A.C..C..............A...C...............A..T..............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD3-16*01  30   ------------------------------------------------------------------------------------......  35

                                      GT-------------------->                                  
                                      I  S  S  W  Y  F  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5816   271  TTTCGTCCTGGTACTTCCAGGACTGGGGTCAGGGCACCCTGGTCACCGTCTCCTCAG  327
J  95.7% (44/46)    IGHJ1*01     7    -----------.........C.......C............................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_206903

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            391     6e-111
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_5817  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.1% (270/290)  IGHV1-8*02  6    ..................G..........................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_5817  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.1% (270/290)  IGHV1-8*02  96   ........A.........................................................C.......................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  D  I  M  T  G  D  I  A  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_5817  181  GAAGTTCAAGGGCAGAGACATCATGACCGGGGACATCGCCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.1% (270/290)  IGHV1-8*02  186  .......C.........T..C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_5817  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  353
V  93.1% (270/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  95.0% (38/40)    IGHJ4*02    9    -------------------------------------------....A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_193721

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            352     3e-99
IGHD4-17*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGCAGCCTTA	GACTACGGTG	CTAAGAGGCTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCGCAGCCTTAGACTACGGTGCTAAGAGGCTTTTTGACTAC	VRGAALDYGAKRLFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5818   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTTTTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-7*03   47   ..............................................C.A.........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  A  G  S  E  E  S  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_5818   91   AGTGGGTGGCCAACATAAAGCAAGCTGGAAGTGAGGAGTCCTATGTGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (237/249)  IGHV3-7*03   137  ........................A..........A.A.A.................A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  V  R  G  A  A  L  D  Y  G  
                    Query_5818   181  AGAACTCACTGTATCTCCAAATGAACACCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGTGAGAGGCGCAGCCTTAGACTACGGTG  270
V  95.2% (237/249)  IGHV3-7*03   227  ................G..........G........................G..........C.....---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD4-17*01  2    --------------------------------------------------------------------------------..........  11

                                      T------------------>                                  
                                      A  K  R  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5818   271  CTAAGAGGCTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (43/43)   IGHJ4*02     6    -----------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_141728

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            329     3e-92
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCTA	TATTACTATGAAAGTAGTGGTT	CAT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCTATATTACTATGAAAGTAGTGGTTCATACTTCTTTGACTAC	ARSLYYYESSGSYFFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	228	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  D  S  I  S  N  S  R  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_5819   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCATCAGTAATTCTAGGTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  92.7% (228/246)  IGHV4-4*02   49   ...............................G.........C.G.AG..AC...................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  H  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  K  S  K 
                    Query_5819   91   GAGTGGATTGGAGACATCCATCATAGTGGGACCACCAACTACAATCCGTCCCTCAAGAGTCGAGTCACCCTCTCAGTAGACAAGTCCAAG  180
V  92.7% (228/246)  IGHV4-4*02   139  ...........G..A...T............G............C........................A.A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       K  R  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  Y  E  S  S 
                    Query_5819   181  AAGCGGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAAGCCTATATTACTATGAAAGTAGT  270
V  92.7% (228/246)  IGHV4-4*02   229  ..C.A.................G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  95.5% (21/22)    IGHD3-22*01  2    ------------------------------------------------------------------------...........T......  19

                                      -------------------->                                  
                                       G  S  Y  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5819   271  GGTTCATACTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  95.5% (21/22)    IGHD3-22*01  20   ....---------------------------------------------------  23
J  97.9% (47/48)    IGHJ4*02     1    -------...A............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_141729

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           352     3e-99
IGHD5-18*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGTCATGGTTAC	GGAGGAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGTCATGGTTACGGAGGAATTGACTAC	ARYSHGYGGIDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	234	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5820   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (234/243)  IGHV4-59*01  49   ...............................G........G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  S  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  K  N 
                    Query_5820   91   TGGATTGGTTATATCTACTACCGTGGGAGCTCCAACTCCAACCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAAGAAC  180
V  96.3% (234/243)  IGHV4-59*01  139  ........G........T...A........A......A......................G.............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  I  D 
                    Query_5820   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGTCATGGTTACGGAGGAATTGAC  270
V  96.3% (234/243)  IGHV4-59*01  229  .............A.................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  86.7% (13/15)    IGHD5-18*01  6    ---------------------------------------------------------------.....CT........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5820   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_193724

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           329     3e-92
IGHD6-13*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGA	GGGTATAG	AAAGGTTG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGAGGGTATAGAAAGGTTGACGGTATGGACGCC	AREGGYRKVDGMDA	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	125	24	21	3	0	87.5
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	232	221	11	0	95.3


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  T  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  F  I  
                    Query_5821   16   GTGCAGCCTCTGGATTCACCTTCACTAATTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATTCATTA  105
V  95.3% (221/232)  IGHV3-48*03  65   ........................G..G............C...........................................A.....  154
                                         A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  R  G  S  I  M  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  R  N  S  L  F  L  
                    Query_5821   106  GTAGTCGTGGTAGTATCATGTACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAGGAACTCACTGTTTCTGC  195
V  95.3% (221/232)  IGHV3-48*03  155  .....A.........C...A....................................................A...........A.....  244
                                      S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  G  G  Y  R  K  V  D  G  M  D  A  W  
                    Query_5821   196  AGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGCGAGAGAGGGAGGGTATAGAAAGGTTGACGGTATGGACGCCTGGG  285
V  95.3% (221/232)  IGHV3-48*03  245  .A..............................G...................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (8/8)     IGHD6-13*01  1    --------------------------------------------------------........--------------------------  8
J  95.7% (45/47)    IGHJ6*02     16   ------------------------------------------------------------------------............T.....  33

                                                                   
                                      G  Q  G  T  A  V  T  V  S  S 
                    Query_5821   286  GCCAAGGGACCGCGGTCACCGTCTCCTCA  314
J  95.7% (45/47)    IGHJ6*02     34   ...........A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_193727

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            335     4e-94
IGHD6-25*01                                                                                           10.3    115  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	GGCT	CAGCG	ACAAAACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCAGCGACAAAACCACTTTGACTTC	AAQRQNHFDF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  S  D  Y  G  M  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_5822   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTAGTGATTATGGCATGCAGTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  93.9% (229/244)  IGHV3-9*01   47   ................................T........GA........C......C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  S  N  S  G  N  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5822   91   AGTGGGTCTCAGGTATTAGTTCGAATAGTGGTAATACAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.9% (229/244)  IGHV3-9*01   137  .....................G...........GC.T.....................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  G  E  D  S  A  L  Y  Y  C  A  A  Q  R  Q  N  H  F  D  
                    Query_5822   181  AGAAGTCCCTGTATCTACAAATGAACAGTTTGAGAGGTGAGGACTCGGCCTTATATTACTGTGCGGCTCAGCGACAAAACCACTTTGACT  270
V  93.9% (229/244)  IGHV3-9*01   227  ....C...........G............C......C.......A.......G...........--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (5/5)     IGHD6-25*01  9    --------------------------------------------------------------------.....-----------------  13
J  88.9% (40/45)    IGHJ4*02     4    ---------------------------------------------------------------------------------.........  12

                                      ->                                  
                                      F  X  G  L  G  T  L  V  T  V  S  S  
                    Query_5822   271  TCTNNGGCCTGGGAACTCTGGTCACCGTCTCCTCAG  306
J  88.9% (40/45)    IGHJ4*02     13   A..GG....A......C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_193726

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           319     2e-89
IGHD2-15*01                                                                                           18.0    0.63 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTTTC	GATATTATAGTG	ATATTAACTGCCCTTAACAGAGCGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GAGAGAGAGGGTTTCGATATTATAGTGATATTAACTGCCCTTAACAGAGCGGGCTACTCCGGTCTGGACGTC	EREGFDIIVILTALNRAGYSGLDV	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  R  R  Y  E  M  N  W  V  R  Q  A  S  G  K  G  L  
                    Query_5823   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTCAGACGATATGAAATGAACTGGGTCCGCCAGGCCTCAGGGAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-48*03  47   ....................................CC.....TA.T..........................TC...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  N  S  N  G  S  V  T  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  G  
                    Query_5823   91   AGTGGATTTCATACATTAATAGTAATGGAAGTGTCACACACTACGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGGCA  180
V  90.8% (227/250)  IGHV3-48*03  137  .....G............G.....G...T...AC..T.T................................A...............C..  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  K  S  L  Y  L  Q  M  S  N  L  R  A  E  D  T  A  L  Y  Y  C  E  R  E  G  F  D  I  I  V  
                    Query_5823   181  AGAAGTCACTGTATCTGCAAATGAGTAACCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGAGAGAGAGGGTTTCGATATTATAGTGA  270
V  90.8% (227/250)  IGHV3-48*03  227  ....C...................AC.G......................G............C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD2-15*01  3    -----------------------------------------------------------------------------......G.....-  14

                                      ----CDR3-IMGT------------------------------>                                 
                                      I  L  T  A  L  N  R  A  G  Y  S  G  L  D  V  W  G  Q  G  T  T  V  P  V  S  S 
                    Query_5823   271  TATTAACTGCCCTTAACAGAGCGGGCTACTCCGGTCTGGACGTCTGGGGCCAGGGGACCACGGTCCCCGTCTCCTCA  347
J  92.3% (48/52)    IGHJ6*02     11   -------------------------.....A....A................A............A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_141722

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           349     2e-98
IGHD3-10*01                                                                                           14.1    8.8  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCCAC	CGCGAGGTTTATGA	ATGGTTC	TTCTTTGGTGGACTACTTT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCACCGCGAGGTTTATGAATGGTTCTTCTTTGGTGGACTACTTTTTTCACTAC	STARFMNGSSLVDYFFHY	249	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	253	5	4	1	0	80
Total	N/A	N/A	253	238	15	0	94.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  R  F  S  F  S  N  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5824   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTCGATTCAGTTTCAGTAACGCCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.1% (238/253)  IGHV3-15*01  47   .......T............G........G......C....................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  L  N  S  K  T  D  G  G  T  A  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_5824   91   AGTGGGTTGGCCGTCTTAACAGCAAAACTGATGGTGGGACAGCAGACTATGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  94.1% (238/253)  IGHV3-15*01  137  ..............A....A.....................A.......C........................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  E  N  R  L  Y  L  Q  M  K  S  L  R  T  E  D  T  A  V  Y  Y  C  S  T  A  R  F  M  N  
                    Query_5824   181  ATTCAGAAAACAGGCTGTATCTGCAAATGAAGAGCCTGAGAACCGAGGACACAGCCGTTTATTACTGTTCCACCGCGAGGTTTATGAATG  270
V  94.1% (238/253)  IGHV3-15*01  227  .....A......C..................C.......A..................G.........A....-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (7/7)     IGHD3-10*01  9    ---------------------------------------------------------------------------------------...  11

                                      -CDR3-IMGT--------------------->                                  
                                      G  S  S  L  V  D  Y  F  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5824   271  GTTCTTCTTTGGTGGACTACTTTTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  100.0% (7/7)     IGHD3-10*01  12   ....--------------------------------------------------------------  15
J  97.7% (42/43)    IGHJ4*02     6    -----------------------...G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_193728

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            411     5e-117
IGHD3-22*01                                                                                           37.2    1e-06 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCCCCTCTCC	GTATTACTATGATAGAAGTGGT	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCCCCTCTCCGTATTACTATGATAGAAGTGGTCCCTTTGACTAC	ARGPSPYYYDRSGPFDY	292	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	71	4	0	94.7
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	298	7	6	1	0	85.7
Total	N/A	N/A	295	279	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  T  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_5825   4    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGACGGTTTCCTGCAAGGCTTCTGGATACACATTCACT  93
V  94.6% (279/295)  IGHV1-3*01   1    .....C.....T...........G...............................A...........................C......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  A  V  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  A  N  G  N  T  I  Y 
                    Query_5825   94   ACCTATGCTGTGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGCCAATGGTAACACAATATAC  183
V  94.6% (279/295)  IGHV1-3*01   91   .G.......A............................................................G..............A...T  180
                                       S  Y  A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  Q  N  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  A  A  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_5825   184  TCACAGAATTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCGCAGCCTACATGGAACTGAGCAGCCTGAGATCTGAAGAC  273
V  94.6% (279/295)  IGHV1-3*01   181  ........G..........................................A.............G........................  270
                                       S  Q  K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------------CDR3-IMGT-------------------->                     
                                       T  A  V  F  Y  C  A  R  G  P  S  P  Y  Y  Y  D  R  S  G  P  F  D  Y  W  G  Q  G  T  L  V 
                    Query_5825   274  ACGGCTGTCTTTTACTGTGCGCGAGGCCCCTCTCCGTATTACTATGATAGAAGTGGTCCCTTTGACTACTGGGGCCAGGGAACCCTGGTC  363
V  94.6% (279/295)  IGHV1-3*01   271  ........G.A..........A...-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  95.5% (21/22)    IGHD3-22*01  1    -----------------------------------...............T......---------------------------------  22
J  100.0% (44/44)   IGHJ4*02     5    -----------------------------------------------------------...............................  35

                                                   
                                       T  V  S  S  
                    Query_5825   364  ACCGTCTCCTCAG  376
J  100.0% (44/44)   IGHJ4*02     36   .............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_141721

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           347     7e-98
IGHD2-8*02                                                                                            16.1    2.1  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD2-8*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAC	TACTGGCGGTG	AA	GATAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTACTACTGGCGGTGAAGATATC	ARSTTGGEDI	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  F  Y  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_5826   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTTCTACATGACCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-11*06  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  S  S  R  S  G  H  S  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_5826   91   AATGGGTTTCATTCATTAGTAGTAGAAGTGGTCACTCAAACTACGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  94.8% (235/248)  IGHV3-11*06  137  .G..........A............T...A..T..A...................................A..................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      R  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  S  T  T  G  G  E  D  
                    Query_5826   181  GGAACTCACTGTTTTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAAGTACTACTGGCGGTGAAGATA  270
V  94.8% (235/248)  IGHV3-11*06  227  A...........A.C...................................G.................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD2-8*02   10   -------------------------------------------------------------------------......T....------  20
J  100.0% (38/38)   IGHJ3*02     11   --------------------------------------------------------------------------------------....  14

                                      ->                                
                                      I  W  G  Q  G  T  M  V  T  V  S  S
                    Query_5826   271  TCTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  304
J  100.0% (38/38)   IGHJ3*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_141726

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     8e-121
IGHD1-26*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	GGG	GGTCTAGTGGAAGGTACTAC	CTCCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTAC	ARGGLVEGTTSFFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	280	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_5827   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCAACCTA  90
V  96.9% (280/289)  IGHV5-51*03  6    ..................................................................................A.C.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  F  G  W  V  R  Q  I  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_5827   91   CTGGTTCGGCTGGGTGCGCCAGATACCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.9% (280/289)  IGHV5-51*03  96   ....A...................G..........................G......................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_5827   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (280/289)  IGHV5-51*03  186  ............................................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  A  R  G  G  L  V  E  G  T  T  S  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5827   271  CATTTATTACTGTGCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCGTC  360
V  96.9% (280/289)  IGHV5-51*03  276  ...G............A..-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  85.0% (17/20)    IGHD1-26*01  1    ----------------------...A......G..C......------------------------------------------------  20
J  97.7% (43/44)    IGHJ4*02     5    ------------------------------------------------.......................................C..  46

                                        
                                        
                    Query_5827   361  AG  362
J  97.7% (43/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_141727

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           310     1e-86
IGHD1-7*01                                                                                            10.3    117  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGCGCAGA	GAACT	CGATT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGCGCAGAGAACTCGATTACTACTTTGACTCC	ARVRRELDYYFDS	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  V  S  G  T  Y  M  S  W  V  R  Q  G  P  R  K  G  L  
                    Query_5828   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCTCCGTCAGTGGCACCTACATGAGCTGGGTCCGCCAGGGTCCACGGAAGGGACTGG  90
V  90.2% (222/246)  IGHV3-53*01  47   ...................................A........A...A.......................C....G.......G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  R  V  S  I  I  Y  T  G  G  P  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_5828   91   AGCGGGTCTCTATTATCTATACTGGTGGTCCCACATTCTACGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAATTCCAAGA  180
V  90.2% (222/246)  IGHV3-53*01  137  ..T.......AG....T....GC......AG.....A........................A............................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------CDR3-IMGT-------
                                      N  T  V  Y  L  Q  M  N  S  L  R  G  E  D  T  A  I  Y  Y  C  A  R  V  R  R  E  L  D  Y  Y  
                    Query_5828   181  ACACAGTCTATCTTCAAATGAACAGCCTGCGCGGCGAGGACACGGCCATTTATTACTGTGCGAGAGTGCGCAGAGAACTCGATTACTACT  270
V  90.2% (222/246)  IGHV3-53*01  227  ....GC.G.....................A.A.C.............G.G................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (5/5)     IGHD1-7*01   11   --------------------------------------------------------------------------.....-----------  15
J  97.9% (47/48)    IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5828   271  TTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.9% (47/48)    IGHJ4*02     7    ......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_141725

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           405     4e-115
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGCA	TATTACTATGATAGTAGT	ATTTATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGCATATTACTATGATAGTAGTATTTATCTTGACTAC	ARAAYYYDSSIYLDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  R  T  S  R  D  S  F  T  N  H 
                    Query_5829   2    CAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCTGGGGCCTCGGTGAAGGTCTCCTGCAGGACTTCTCGTGACTCCTTTACCAACCAT  91
V  94.8% (274/289)  IGHV1-18*01  7    ....................T.......................A................A.G.....G..T..A.........G.T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  N  T  N  Y  A  Q 
                    Query_5829   92   GGATTTAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAAACTATGCACAG  181
V  94.8% (274/289)  IGHV1-18*01  97   ..TA.C......................................................G.............................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_5829   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (274/289)  IGHV1-18*01  187  ...C......................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  A  A  Y  Y  Y  D  S  S  I  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_5829   272  GTTTATTACTGTGCGAGAGCCGCATATTACTATGATAGTAGTATTTATCTTGACTACTGGGGCCAGGGAACCCTCGTCACCGTCTCCTCA  361
V  94.8% (274/289)  IGHV1-18*01  277  ..G................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (18/18)   IGHD3-22*01  2    ------------------------..................------------------------------------------------  19
J  97.6% (41/42)    IGHJ4*02     7    -------------------------------------------------.........................G...............  47

                                       
                                       
                    Query_5829   362  G  362
J  97.6% (41/42)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_70212

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5830   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5830   91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_5830   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5830   271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_344544

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	216	29	0	88.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_5831   1    ACCCTGTCCCTCACCTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  88.2% (216/245)  IGHV4-34*01  49   .......................CTA..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_5831   91   TGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAA  180
V  88.2% (216/245)  IGHV4-34*01  139  ................A............CA.C.AC......C..T......A...............A....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W 
                    Query_5831   181  CAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCTGGCGAAGACAGCGCAACTGG  270
V  88.2% (216/245)  IGHV4-34*01  229  ..GT...........C..A......T.....................G.....C......A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (49/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------.......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5831   271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (49/50)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_165049

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           361     4e-102
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TGGACTTCAGTC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGACTTCAGTCCTTTGACTAC	ARDGLQSFDY	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	241	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  L  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5832   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGTAGTGGTGGTTATCTCTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (241/251)  IGHV4-31*03  49   ..................A......................C...........CTA..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  E  T  S 
                    Query_5832   91   CTGGAGTGGATTGGTTACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTTACCATATCACTAGAGACGTCT  180
V  96.0% (241/251)  IGHV4-31*03  139  ..............G.......A...................................A...................G....C......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  L  Q  S  F  D 
                    Query_5832   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGGACTTCAGTCCTTTGAC  270
V  96.0% (241/251)  IGHV4-31*03  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  100.0% (44/44)   IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5832   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (44/44)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_165048

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           324     7e-91
IGHD2-8*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GA	TAATGGTGT	GGCAGTGGCTAGAAGATTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAATGGTGTGGCAGTGGCTAGAAGATTTTTTGACTCC	ARDNGVAVARRFFDS	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5833   1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.6% (225/243)  IGHV4-59*08  49   ....................T......................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       L  I  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S  R  N 
                    Query_5833   91   TTGATTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGTCGACTCACCATCTCAGTAGACACGTCGAGGAAC  180
V  92.6% (225/243)  IGHV4-59*08  139  .G......G...A........A........A.....................A.......G.......A..............C.A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  S  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  N  G  V  A  V  A  R  R 
                    Query_5833   181  CAGTTCTCCCTGAGCGTGAACTCTGTGACGGCCGCAGACACGGCCGTCTATTACTGTGCGAGAGATAATGGTGTGGCAGTGGCTAGAAGA  270
V  92.6% (225/243)  IGHV4-59*08  229  .............AGC...G.........C.................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD2-8*01   13   -----------------------------------------------------------------.........----------------  21

                                      ----------->                                  
                                       F  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_5833   271  TTTTTTGACTCCTGGGGCCAGGGAATCCTGGTCACCGTTTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.......A..............C............C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_133318

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACAGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	268	18	0	93.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_5834   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  93.7% (268/286)  IGHV5-51*01  6    ..............................A...................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  Q  G  L  E  L  M  G  L  I  Y  P  G  D  S  D  T  W  Y  S  P
                    Query_5834   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCAAGGCCTGGAGTTGATGGGGCTCATCTATCCTGGTGACTCTGATACCTGGTACAGTCC  180
V  93.7% (268/286)  IGHV5-51*01  96   ......................A........A............G.......A..........................A.A.....C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  T  S  A  Y  L  Q  W  T  T  L  K  A  S  D  T  A
                    Query_5834   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCACCTCCGCCTACCTGCAGTGGACCACCCTGAAGGCCTCGGACACCGC  270
V  93.7% (268/286)  IGHV5-51*01  186  ....................C...................A...G.A..................G..G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5834   271  CATTTACTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACAGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  353
V  93.7% (268/286)  IGHV5-51*01  276  ...G..T.........-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------.................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_165045

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         386     1e-109
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCTTAAGGTCAATCGCGTC	CAGTGGCTGG	GCGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCA	ARHPLRSIASSGWAS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_5835     1    GCAGCTGGTGCAGTCTGGAGGAGAGGTGAAGAAGCCCGGGGAGTCTTTGAGGATTTCCTGTAAGGCTTCTGGATACACCTTTACCAACTA  90
V  92.7% (268/289)  IGHV5-10-1*01  6    ....................C.........A...............C.......C..........G...........G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  S  Y  S  P
                    Query_5835     91   CTGGATCAGCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGACCCTAGTGACTCTTATACCAGCTACAGTCC  180
V  92.7% (268/289)  IGHV5-10-1*01  96   ......................A.....................................T...................A......C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  D  G  N  V  T  I  S  V  D  K  S  I  S  T  A  C  L  Q  W  S  S  L  M  A  S  D  T  A
                    Query_5835     181  GTCCTTCGACGGCAACGTCACCATCTCAGTTGACAAGTCCATCAGTACTGCCTGTTTGCAGTGGAGCAGCCTGATGGCCTCGGACACCGC  270
V  92.7% (268/289)  IGHV5-10-1*01  186  .......C.A...C...............C...............C.......ACC..................A...............  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          M  Y  Y  C  A  R  H  P  L  R  S  I  A  S  S  G  W  A  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5835     271  CATGTATTATTGTGCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCATGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  92.7% (268/289)  IGHV5-10-1*01  276  .........C.........-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD6-19*01    9    ------------------------------------------..........--------------------------------------  18
J  100.0% (34/34)   IGHJ4*02       15   ----------------------------------------------------------................................  46

                                          
                                          
                    Query_5835     361  AG  362
J  100.0% (34/34)   IGHJ4*02       47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_165044

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           310     1e-86
IGHD2-2*01                                                                                            12.2    34   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	GGACGAGG	GGACATTGCGGTAGT	GTTACCTGTTTTAATGGGAAATATGACA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGACGAGGGGACATTGCGGTAGTGTTACCTGTTTTAATGGGAAATATGACATTGACTAC	VRTRGHCGSVTCFNGKYDIDY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  D  F  T  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_5836   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAGTGACTTTACTATGCACTGGGTCCGCCAGGTTCCAGGGAAGGGACTGG  90
V  90.2% (222/246)  IGHV3-64*05  47   ............................................AG..A.G.....................C.................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  A  I  S  S  D  G  G  A  T  T  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5836   91   AATTTGTTTCAGCTATCAGTAGTGATGGGGGTGCCACAACCTACGGAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  90.2% (222/246)  IGHV3-64*05  137  ...A............T......A........AG....TA.....C............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  F  L  H  L  S  S  L  R  P  E  D  T  S  I  Y  F  C  V  R  T  R  G  H  C  G  S  
                    Query_5836   181  AGAACACACTGTTTCTTCATTTGAGCAGTCTGAGACCTGAGGACACATCTATTTATTTCTGTGTGAGGACGAGGGGACATTGCGGTAGTG  270
V  90.2% (222/246)  IGHV3-64*05  227  .......G....A.G....AA..............G..........GG..G.G....A........------------------------  292
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V                          
D  80.0% (12/15)    IGHD2-2*01   2    --------------------------------------------------------------------------...T....TA.....-  16

                                      DR3-IMGT-------------------------->                                  
                                      V  T  C  F  N  G  K  Y  D  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5836   271  TTACCTGTTTTAATGGGAAATATGACATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_165047

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_5837   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_5837   91   GAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ...................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_5837   181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5837   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_165046

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         378     3e-107
IGHD3-22*01                                                                                           48.8    3e-10 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	CAAC	TACTATGATAGTAGTGGTTATTACT	TTGTTTGGTGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGCAACTACTATGATAGTAGTGGTTATTACTTTGTTTGGTGGTAC	ASNYYDSSGYYFVWWY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	245	3	0	98.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_5838     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  98.8% (245/248)  IGHV4-30-4*01  49   ..................A..............................A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_5838     91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  98.8% (245/248)  IGHV4-30-4*01  139  ..........................................................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  N  Y  Y  D  S  S  G 
                    Query_5838     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCTGACACGGCCGTGTATTACTGTGCCAGCAACTACTATGATAGTAGTGGT  270
V  98.8% (245/248)  IGHV4-30-4*01  229  .........................................A..........................----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (25/25)   IGHD3-22*01    5    ------------------------------------------------------------------------..................  22

                                        GT------------------>                                  
                                         Y  Y  F  V  W  W  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5838     271  TATTACTTTGTTTGGTGGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  100.0% (25/25)   IGHD3-22*01    23   .......------------------------------------------------  29
J  100.0% (37/37)   IGHJ4*02       12   ------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_165041

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            369     2e-104
IGHD3-16*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCAGGGGAGTGGTATACA	TATGATTACGTTTGGGGGAGT	AACCGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACCAGGGGAGTGGTATACATATGATTACGTTTGGGGGAGTAACCGCCTTTGACTAC	AKDQGSGIHMITFGGVTAFDY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5839   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  97.2% (243/250)  IGHV3-9*01   47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  L  N  W  N  S  A  N  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5839   91   AGTGGGTCTCAGGTCTTAATTGGAATAGTGCTAACATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (243/250)  IGHV3-9*01   137  ..............A...G...........G..G........................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  C  Y  C  A  K  D  Q  G  S  G  I  H  
                    Query_5839   181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCCTGTGTTACTGTGCAAAAGACCAGGGGAGTGGTATACATA  270
V  97.2% (243/250)  IGHV3-9*01   227  ..........G.......................................T...A...............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (21/21)   IGHD3-16*01  5    ----------------------------------------------------------------------------------------..  6

                                      DR3-IMGT-------------------------->                                  
                                      M  I  T  F  G  G  V  T  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5839   271  TGATTACGTTTGGGGGAGTAACCGCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  100.0% (21/21)   IGHD3-16*01  7    ...................--------------------------------------------------  25
J  100.0% (44/44)   IGHJ4*02     5    -------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_133313

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAACA	TATGACT	TATAGCAGT	AGTCCATTA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATATGACTTATAGCAGTAGTCCATTAGACTAC	AKHMTYSSSPLDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	13	8	0	61.9
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	222	29	0	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  A  S  V  S  S  G  D  Y  Y  W  G  W  I  R  Q  P  P  G  R  G 
                    Query_5840   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCGTCAGTAGTGGTGACTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAGGGGG  90
V  88.4% (222/251)  IGHV4-39*01  49   ..................A............G....A....C...A..AGT..................................A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  Y  N  T  R  Y  P  Y  Y  S  L  S  L  K  S  R  V  T  I  S  V  D  S  S 
                    Query_5840   91   CTGGAGTGGCTTGGGAGTATCTATAATACTAGATATCCCTACTATAGTTTGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACTCGTCC  180
V  88.4% (222/251)  IGHV4-39*01  139  .........A..............T...G.G.GAGCA.......C.ACCC..................................A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  E  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  H  M  T  Y  S  S  S 
                    Query_5840   181  AAGAACGAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTTTATTTCTGTGCGAAACATATGACTTATAGCAGTAGT  270
V  88.4% (222/251)  IGHV4-39*01  229  ......C............A.................................G....A........G...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD6-19*01  4    ------------------------------------------------------------------------------.........---  12

                                      ----------->                                  
                                       P  L  D  Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_5840   271  CCATTAGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCTTCAG  316
J  95.0% (38/40)    IGHJ4*02     9    ------.............A.....................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_133310

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           327     9e-92
IGHD1-26*01                                                                                           14.1    8.6  
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	TGGGAGC	GCCAACTCTACACGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGGAGCGCCAACTCTACACGGCTACTACTACGGTATGGACGTC	ARVGAPTLHGYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  I  S  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5841   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCATTTCCTATGGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-21*01  47   ....................................C.....G.AG....A.......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  G  S  Y  T  Y  F  A  A  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_5841   91   AGTGGGTCTCGTCCATTAGTAGTAGTGGTTCTTACACATACTTCGCGGCCTCAGTAGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.0% (229/249)  IGHV3-21*01  137  ..........A...............A..AG.....T.....A...A.A......GA.................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  I  L  Q  M  D  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  G  A  P  T  L  H  
                    Query_5841   181  AGAACTCACTGATTCTGCAAATGGACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGTGGGAGCGCCAACTCTACACG  270
V  92.0% (229/249)  IGHV3-21*01  227  ...........TA..........A................G...........G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  8    ---------------------------------------------------------------------.......--------------  14

                                      GT-------------------->                                 
                                      G  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5841   271  GCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (55/55)   IGHJ6*02     8    -.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_133311

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           400     9e-114
IGHD4-17*01                                                                                           18.0    0.67  
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAG	CTACGGTGA	GTCCGAGTAGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTATGGACGTC	ARDLATVSPSSFYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  S  S  Y 
                    Query_5842   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCCTCTGGTTACACCTTTAGTAGTTAT  91
V  94.1% (273/290)  IGHV1-18*01  7    ...............................................................G.T................CC..C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_5842   92   GGTATCACCTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  181
V  94.1% (273/290)  IGHV1-18*01  97   .......G.........A..............A................................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_5842   182  ATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.1% (273/290)  IGHV1-18*01  187  .A.C...A..G.................C....................C..........C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  S  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_5842   272  GTGTATTACTGTGCGAGAGATTTAGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACC  361
V  94.1% (273/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------.........--------------------------------------------------------  12
J  100.0% (52/52)   IGHJ6*02     11   -----------------------------------------------...........................................  53

                                               
                                       V  S  S 
                    Query_5842   362  GTCTCCTCA  370
J  100.0% (52/52)   IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_253240

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTTTGTGG	TACTCTGGTTCGGGGAGT	AATACCCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTTGTGGTACTCTGGTTCGGGGAGTAATACCCGTTTTGACTAC	ARALWYSGSGSNTRFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_5843   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ...............................G.............................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  T  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_5843   91   CTGGAGTGGATTGGATACATCTATTACAGTGGGAGCACCTACTACACCCCGTCCCTCAAGAGTCGAGTTACCATTTCAGTCGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ..............G...............................A...........................A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  L  W  Y  S  G  S 
                    Query_5843   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTTTGTGGTACTCTGGTTCG  270
V  97.6% (244/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  5    ------------------------------------------------------------------------------....A.......  16

                                      MGT-------------------->                                  
                                       G  S  N  T  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5843   271  GGGAGTAATACCCGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  94.4% (17/18)    IGHD3-10*01  17   ......----------------------------------------------------  22
J  100.0% (43/43)   IGHJ4*02     6    ---------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_76821

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           327     9e-92
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	AGCT	CGATTTTTGGACTGGTTATT	TTAGGTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAAGCTCGATTTTTGGACTGGTTATTTTAGGTAACTTTGACTAC	AGSSIFGLVILGNFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  A  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_5844   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTAGCAGTGCTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGG  90
V  92.0% (229/249)  IGHV4-39*01  49   .............................T...........C..T...AG.........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  N  T  Y  Y  N  P  S  L  R  S  R  L  H  M  S  V  D  T  S 
                    Query_5844   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAACACCTACTATAATCCGTCCCTCAGGAGTCGACTCCACATGTCCGTAGACACTTCT  180
V  92.0% (229/249)  IGHV4-39*01  139  ..................................G.........C..C..........A.......G..AC...A...........G..C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  I  F  G  L  V 
                    Query_5844   181  AAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCAGACACGGCTGTTTATTACTGTGCGGGAAGCTCGATTTTTGGACTGGTT  270
V  92.0% (229/249)  IGHV4-39*01  229  ...................A.....G...........................G............A..---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-3*01   7    -------------------------------------------------------------------------...........G.....  23

                                      GT------------------>                                  
                                       I  L  G  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5844   271  ATTTTAGGTAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  325
D  95.0% (19/20)    IGHD3-3*01   24   ...----------------------------------------------------  26
J  97.8% (44/45)    IGHJ4*02     4    ----------..................................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_258589

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           333     1e-93
IGHD1-1*01                                                                                            14.1    8.4  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGGCCTT	TGGAACG	GGGGACTACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGGCCTTTGGAACGGGGGACTACCACTTTGACTAC	ARAPAFGTGDYHFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  I  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_5845   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCATCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-11*01  47   .....................C..............C.....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  G  S  G  S  R  I  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  G  N  A  
                    Query_5845   91   AGTGGCTTTCATACATTAGTGGTAGTGGTTCTAGGATCCACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGGCAACGCCG  180
V  92.8% (231/249)  IGHV3-11*01  137  .....G..............A........AG..CC..AT..........................................A.......A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  F  C  A  R  A  P  A  F  G  T  G  
                    Query_5845   181  AGAACTCCCTATATCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCCATTTATTTCTGTGCGAGAGCCCCGGCCTTTGGAACGGGGG  270
V  92.8% (231/249)  IGHV3-11*01  227  .......A..G..............C........................G.G....A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-1*01   9    -------------------------------------------------------------------------------.......----  15

                                      ---------------->                                  
                                      D  Y  H  F  D  Y  W  G  Q  G  A  P  V  T  V  S  S  
                    Query_5845   271  ACTACCACTTTGACTACTGGGGCCAGGGAGCCCCGGTCACCGTCTCCTCAG  321
J  95.6% (43/45)    IGHJ4*02     4    ------.......................A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_258588

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD6-13*01                                                                                           14.1    8.4  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AG	AGCGGCGGCTGGT	GTCGCGTTTTTCG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGAGCGGCGGCTGGTGTCGCGTTTTTCGACAACTGGTTCGGCCCC	ARRAAAGVAFFDNWFGP	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5846   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  92.6% (225/243)  IGHV4-59*01  49   ........................................G.AG..........................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  N 
                    Query_5846   91   TGGATTGGATATATCTATTACAGTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGCCACCATTTCAGTTGACACGTCCAAGAAC  180
V  92.6% (225/243)  IGHV4-59*01  139  ........G....................C...............................T......A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  L  Y  F  C  A  R  R  A  A  A  G  V  A  F  F 
                    Query_5846   181  CAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCAGCGGATACGGCCTTATATTTCTGTGCGAGAAGAGCGGCGGCTGGTGTCGCGTTTTTC  270
V  92.6% (225/243)  IGHV4-59*01  229  .............A.....GC...........T.....C......G.G....A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (11/13)    IGHD6-13*01  7    -----------------------------------------------------------------...A..A......------------  19

                                      ----------------->                                  
                                       D  N  W  F  G  P  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_5846   271  GACAACTGGTTCGGCCCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  322
J  96.1% (49/51)    IGHJ5*02     1    -............A.................C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_326861

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           304     9e-85
IGHD3-9*01                                                                                            27.6    7e-04
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGGGGGGC	TGACTGGTTATTAT	CGAACGGGGACTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGGGGGGCTGACTGGTTATTATCGAACGGGGACTTT	AKDRGADWLLSNGDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  R  A  A  S  G  F  I  F  Y  N  Y  G  F  L  W  V  R  Q  T  A  G  K  G  L  
                    Query_5847   1    GGTCCCTGAGACTCTCCCGTGCAGCCTCTGGATTCATTTTCTATAACTATGGCTTCCTCTGGGTCCGCCAGACTGCAGGCAAGGGGCTGG  90
V  88.8% (222/250)  IGHV3-30*18  47   .................T..................CC...AG..G.......A.G.A.............G..C...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  T  I  S  H  D  A  N  N  E  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_5847   91   AGTGGGTGGCAACGATATCACATGATGCAAATAATGAATATTATGCAGACTCAGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCC  180
V  88.8% (222/250)  IGHV3-30*18  137  ...........GTT......T......G..G....A....C...........C....A...............................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      Q  N  T  V  Y  L  Q  M  D  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  R  G  A  D  W  L  
                    Query_5847   181  AGAACACGGTGTATCTGCAAATGGACAGCCTGAGACCTGAAGACACGGCTGTCTACTACTGTGCGAAAGATCGGGGGGCTGACTGGTTAT  270
V  88.8% (222/250)  IGHV3-30*18  227  ........C..............A...........G....G...........G..T..............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (14/14)   IGHD3-9*01   15   -------------------------------------------------------------------------------...........  25

                                      ---------------->                                
                                      L  S  N  G  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5847   271  TATCGAACGGGGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
D  100.0% (14/14)   IGHD3-9*01   26   ...----------------------------------------------  28
J  100.0% (32/32)   IGHJ4*02     15   -----------------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_258585

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5848   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_5848   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_5848   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_5848   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_258584

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           339     1e-95
IGHD2-8*02                                                                                            12.2    30   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTGGGCCGTTGGCC	TACTGG	GTCT	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  T  N  H  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5849   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCGTCAGTACCAACCACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-53*01  47   ...............................G.............G....T......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  R  V  S  I  I  F  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  K  
                    Query_5849   91   AGCGGGTCTCAATTATTTTTAGTGGTGGAAGTACATACTACGCAGACTCCGTGAAGGGCCGATTCTCCATCTCCAGAGACAATTCCAAAA  180
V  93.9% (232/247)  IGHV3-53*01  137  ..T........G......A...C.....T..C.................................A......................G.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT---------------------------------------------------->                               
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  M  Y  Y  C  A  R  D  W  A  V  G  L  L  G  
                    Query_5849   181  ACACACTATATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATGTATTACTGTGCGAGAGATTGGGCCGTTGGCCTACTGGGTC  270
V  93.9% (232/247)  IGHV3-53*01  227  ....G..G.......................................G...................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (6/6)     IGHD2-8*02   10   ---------------------------------------------------------------------------------......---  15

                                                                       
                                      L  G  Q  G  T  L  V  T  V  S  S  
                    Query_5849   271  TGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (32/32)   IGHJ4*02     17   -................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_258586

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           286     1e-79
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCAGC	ATACATCTCTGGT	CACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAGCATACATCTCTGGTCACCCCTAC	SAYISGHPY	240	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	102	12	0	89.5
Total	N/A	N/A	239	211	28	0	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  V  S  V  H  Y  M  S  W  V  R  Q  A  P  G  R  G  L  
                    Query_5850   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCGTCAGTGTACACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAGGGGACTGG  90
V  88.3% (211/239)  IGHV3-53*01  47   ...............................G...A........AGCA.................................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  L  T  S  G  K  T  Y  Y  T  D  S  A  M  G  R  F  T  I  S  R  D  S  S  K  
                    Query_5850   91   AGTGGGTCTCAGCGATTCTTACCAGTGGTAAGACATACTACACAGACTCCGCGATGGGCCGATTCACCATCTCCAGAGACTCTTCCAAGA  180
V  88.3% (211/239)  IGHV3-53*01  137  ............TT...TA..G.G......GC.........G.........T..A.........................AA........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->    
                                      N  T  V  N  L  Q  M  N  S  L  S  A  G  D  T  A  F  Y  Y  C  S  A  Y  I  S  G  H  P  Y  W  
                    Query_5850   181  ACACAGTGAATCTTCAAATGAACAGCCTGAGCGCCGGGGACACGGCCTTCTATTACTGTTCAGCATACATCTCTGGTCACCCCTACTGGG  270
V  88.3% (211/239)  IGHV3-53*01  227  ....GC..T......................A....A..........G.G.........-------------------------------  285
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                                
D  84.6% (11/13)    IGHD5-18*01  5    ----------------------------------------------------------------.....G..A....-------------  17
J  100.0% (38/38)   IGHJ4*02     11   ----------------------------------------------------------------------------------........  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_5850   271  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  300
J  100.0% (38/38)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_258581

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           276     2e-76
IGHD4-4*01                                                                                            18.0    0.55 
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD4-4*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTAT	TACAGTAAC	CTTGAGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTATTACAGTAACCTTGAGGAC	RESITVTLRT	242	271	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	29	28	0	1	96.6
CDR1-IMGT	29	52	24	20	4	0	83.3
FR2-IMGT	53	103	51	43	8	0	84.3
CDR2-IMGT	104	127	24	16	8	0	66.7
FR3-IMGT	128	241	114	100	14	0	87.7
CDR3-IMGT (germline)	242	249	8	8	0	0	100
Total	N/A	N/A	250	215	34	1	86


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L   D  S  P  V  Q  P  L  D  S  F  S  V  T  T  T  *  V  G  S  A  R  L  R  G  R  G  W 
                    Query_5851   1    GGTCCCT-AGACTCTCCTGTGCAGCCTCTGGATTCATTTTCGGTGACCACTACATGAGTTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  89
V  86.0% (215/250)  IGHV3-11*06  47   .......G............................CC...A.....T..........C...A.............A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       R  Q  F  H  S  S  V  T  L  V  I  T  Q  G  I  E  T  L  *  G  T  D  S  P  S  P  E  T  T  P 
                    Query_5851   90   AGACAATTTCATTCATCAGTCACACTGGTGATTACACAAGGTATAGAGACCCTGTGAGGGACCGATTCACCATCTCCAGAGACAACGCCA  179
V  86.0% (215/250)  IGHV3-11*06  137  ..TGGG......A...T...AGT.G.A..AG........AC..CGC....T......A..G.............................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                       R  I  H  C  I  C  K  *  A  A  *  K  S  R  T  R  L  S  T  T  V  R  E  S  I  T  V  T  L  R 
                    Query_5851   180  AGAATTCACTGTATCTGCAAATGAGCAGCCTGAAAGTCGAGGACACGGCTGTCTACTACTGTGCGAGAGAGTATTACAGTAACCTTGAGG  269
V  86.0% (215/250)  IGHV3-11*06  227  ....C...................A........G..C...............G..T..............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD4-4*01   5    --------------------------------------------------------------------------.........-------  13

                                      ->                                  
                                       T  G  A  R  E  P  W  S  S  S  P  Q 
                    Query_5851   270  ACTGGGGCCAGGGAACCCTGGTCATCGTCTCCGCAG  305
J  94.4% (34/36)    IGHJ4*02     13   ........................C.......T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_258580

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           315     5e-88
IGHD6-19*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCAAC	GGGTATAGAAGTGGC	AGATA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAACGGGTATAGAAGTGGCAGATAACTTCTACTATGGTTTGGACGTC	AATGIEVADNFYYGLDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  H  G  M  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_5852   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAGTCATGGCATGCAGTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.0% (223/245)  IGHV3-30*03  47   ...........................................T..CT..........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  F  N  G  S  H  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_5852   91   AATGGTTGGCAGTTATCTCATTTAATGGAAGTCATACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  91.0% (223/245)  IGHV3-30*03  137  .G...G..........A....A.G........A...A...........................A......A..................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  A  L  Y  L  Q  M  A  S  L  R  S  A  D  T  A  V  Y  F  C  A  A  T  G  I  E  V  A  D  
                    Query_5852   181  AGAACGCACTGTATCTGCAAATGGCCAGCCTGAGATCTGCGGACACGGCTGTTTACTTCTGTGCGGCAACGGGTATAGAAGTGGCAGATA  270
V  91.0% (223/245)  IGHV3-30*03  227  .....A.G...............AA..........G...A............G..T.A.......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.3% (14/15)    IGHD6-19*01  1    ----------------------------------------------------------------------........C......-----  15

                                      GT-------------------->                                 
                                      N  F  Y  Y  G  L  D  V  W  G  H  G  T  T  V  T  F  S  S 
                    Query_5852   271  ACTTCTACTATGGTTTGGACGTCTGGGGCCACGGGACCACGGTCACCTTCTCCTCA  326
J  91.1% (51/56)    IGHJ6*02     7    ...A......C...A................A...............G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_258583

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           294     6e-82
IGHD3-3*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGGCGACTT	CGATTTTTGGA	ATAGC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGGCGACTTCGATTTTTGGAATAGCCTACGTTGATTAC	AREGATSIFGIAYVDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	49	2	0	96.1
CDR2-IMGT	100	123	24	16	8	0	66.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	232	210	22	0	90.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  N  D  Y  F  M  S  W  I  R  Q  V  P  G  K  G  L  E  W  V  S  Y  I  
                    Query_5853   14   GTGCAGCCTCTGGATTCACCTTCAATGACTACTTCATGAGCTGGATCCGCCAGGTTCCAGGGAAGGGGCTGGAATGGGTTTCATACATTG  103
V  90.5% (210/232)  IGHV3-11*01  65   ........................G........A....................C..................G...............A  154
                                         A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      G  P  S  A  S  T  L  F  Y  A  D  S  V  R  G  R  F  T  V  S  R  D  N  A  K  N  S  L  H  L  
                    Query_5853   104  GTCCTAGTGCTTCCACCTTATTCTACGCTGACTCTGTGAGGGGCCGATTCACCGTCTCAAGGGACAACGCCAAGAACTCACTGCATCTGC  193
V  90.5% (210/232)  IGHV3-11*01  155  ..AG.....G.AGT...A...A......A..........A.............A....C........................T......  244
                                      S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  D  S  L  T  A  E  D  S  A  V  Y  Y  C  A  R  E  G  A  T  S  I  F  G  I  A  Y  V  D  
                    Query_5853   194  AAATGGACAGCCTGACAGCCGAGGACTCGGCCGTCTATTACTGTGCGAGAGAGGGGGCGACTTCGATTTTTGGAATAGCCTACGTTGATT  283
V  90.5% (210/232)  IGHV3-11*01  245  .....A.........G..........A.......G.................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (11/11)   IGHD3-3*01   7    ---------------------------------------------------------------...........----------------  17
J  91.5% (43/47)    IGHJ4*02     2    -------------------------------------------------------------------------------....T....C.  12

                                      ->                                  
                                      Y  W  G  Q  G  S  L  V  S  V  S  S  
                    Query_5853   284  ACTGGGGCCAGGGATCCCTGGTCTCCGTCTCCTCAG  319
J  91.5% (43/47)    IGHJ4*02     13   ..............A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_258582

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           327     8e-92
IGHD3-16*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	GTGGAGC	TTGGGGG	GCCTAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTGGAGCTTGGGGGGCCTACGACTAC	GGAWGAYDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  A  M  A  W  L  R  Q  A  P  G  K  G  L  
                    Query_5854   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCACCTATGCCATGGCCTGGCTCCGCCAGGCTCCAGGGAAGGGGCTAC  90
V  93.0% (226/243)  IGHV3-23*01  47   ..........................................G..G..........AG....G.........................GG  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  D  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5854   91   AATGGGTCTCATCTATTAGTGATAGTGGAGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.0% (226/243)  IGHV3-23*01  137  .G.........G.........G......T.............................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      N  N  T  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  G  G  A  W  G  A  Y  D  Y  
                    Query_5854   181  ACAACACACTGTCTCTGCAAATGAATAGCCTGAGAGCCGAAGACACGGCCGTATATTATTGTGGTGGAGCTTGGGGGGCCTACGACTACT  270
V  93.0% (226/243)  IGHV3-23*01  227  .G.....G....A............C..............G.................C....---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (7/7)     IGHD3-16*01  16   ----------------------------------------------------------------------.......-------------  22
J  100.0% (38/38)   IGHJ4*02     9    -----------------------------------------------------------------------------------.......  15

                                                                     
                                      W  G  Q  G  T  L  V  T  V  S  S
                    Query_5854   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTC  301
J  100.0% (38/38)   IGHJ4*02     16   ...............................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_326863

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     1e-95
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTGCGGTATGGACGTC	AREAYSYCGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5855   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  P  L  K  C  R  V  T  I  S  V  D  K  S  K  N 
                    Query_5855   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCCCCCTCAAGTGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G..................A...............C.T........A........................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  C  G  M  D 
                    Query_5855   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTGCGGTATGGAC  270
V  94.3% (231/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  93.1% (54/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC....A..........  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_5855   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  93.1% (54/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_122767

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           355     3e-100
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              54.5    1e-11 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCACCCAA	TATGGTTCGGAGAGT	CTG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCACCCAATATGGTTCGGAGAGTCTG	ARATQYGSESL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	258	31	0	89.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_5856   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACTTCCTAT  91
V  89.3% (258/289)  IGHV1-18*01  7    .................................................A.................................CAG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  S  W  V  R  Q  A  P  G  G  G  L  E  W  M  G  W  S  G  P  N  N  D  D  A  H  Y  G  H 
                    Query_5856   92   GGTGTCAGCTGGGTGCGCCAGGCCCCTGGAGGAGGGCTTGAATGGATGGGATGGAGCGGCCCTAACAATGATGACGCACACTATGGACAT  181
V  89.3% (258/289)  IGHV1-18*01  97   ...A.............A............CA.........G.............T.A..G..T......G.A..A..A......C...G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  L  R  G  R  V  T  I  T  T  D  T  S  T  A  T  S  F  M  E  L  R  S  L  R  S  A  D  T  A 
                    Query_5856   182  AGCCTCCGGGGCAGAGTCACCATTACCACAGACACATCAACGGCCACATCCTTCATGGAGTTGAGGAGCCTGAGATCTGCCGACACGGCC  271
V  89.3% (258/289)  IGHV1-18*01  187  .AG....A...............G..............C...AG....G...A.......C..................A..........  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  A  T  Q  Y  G  S  E  S  L  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_5856   272  GTATATTACTGTGCGAGAGCCACCCAATATGGTTCGGAGAGTCTGTGGGGCCAGGGAGCCCTGGTCACAGTCTCCTCAG  350
V  89.3% (258/289)  IGHV1-18*01  277  ..G................------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                              
D  93.3% (14/15)    IGHD3-10*01  8    ---------------------------..........G....-------------------------------------  22
J  94.1% (32/34)    IGHJ4*02     15   ---------------------------------------------............A..........C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_92913

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            392     2e-111
IGHD6-6*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	99	15	0	86.8
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	273	22	0	92.5


Alignments

                                     <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S 
                    Query_5857  3    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGC  92
V  92.5% (273/295)  IGHV1-8*02  1    .....G.................G..........................................................C.....C.  90
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                     GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                      S  C  D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 
                    Query_5857  93   AGCTGTGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTAT  182
V  92.5% (273/295)  IGHV1-8*02  91   ....A........A.........................................................C..................  180
                                      S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                     -----------------------------------------------FR3-IMGT-----------------------------------
                                      A  Q  K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  G  L  N  A  E  D 
                    Query_5857  183  GCACAGAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCGGCCTCAACGCTGAAGAC  272
V  92.5% (273/295)  IGHV1-8*02  181  ............C............C.......A..A...C.T....A..................C.....A....G.GAT....G...  270
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                     -----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_5857  273  ACGGCCGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  360
V  92.5% (273/295)  IGHV1-8*02  271  ........G................---------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    ------------------------------------........--------------------------------------------  16
J  95.0% (38/40)    IGHJ4*02    9    ------------------------------------------------....A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_220724

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            319     2e-89
IGHD3-9*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAAGAGCGGTACGCATTGAT	ACTGTTTATT	CCGAGGGGCCTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAAGAGCGGTACGCATTGATACTGTTTATTCCGAGGGGCCTCCTGACTAC	ATRAVRIDTVYSEGPPDY	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  N  S  N  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_5858  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGTCCATCAGTAATAGTAACTGGTGGACTTGGATTCGCCAGCCCCCAGGAAAGGGGCTG  90
V  91.8% (224/244)  IGHV4-4*01  49   ................................C........C.G..............G....G.C..............G.........  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  I  D  S  G  S  T  N  Y  N  P  S  L  M  S  R  V  I  I  S  L  D  K  P  K 
                    Query_5858  91   GAGTGGATTGGGGAAATTATTGATAGTGGGAGCACCAACTACAACCCGTCCCTCATGAGTCGAGTCATCATCTCACTAGACAAGCCCAAG  180
V  91.8% (224/244)  IGHV4-4*01  139  .................CTA.C.................................A...........C...A...G........T.....  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                      N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  T  R  A  V  R  I  D  T  V 
                    Query_5858  181  AATCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGACAAGAGCGGTACGCATTGATACTGTT  270
V  91.8% (224/244)  IGHV4-4*01  229  ..C..............G....G................................G........--------------------------  292
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  90.0% (9/10)     IGHD3-9*01  17   ------------------------------------------------------------------------------------....G.  22

                                     GT--------------------->                                  
                                      Y  S  E  G  P  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5858  271  TATTCCGAGGGGCCTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  90.0% (9/10)     IGHD3-9*01  23   ....------------------------------------------------------  26
J  100.0% (41/41)   IGHJ4*02    8    -----------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_220725

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_5859   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_5859   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.2% (226/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_5859   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.2% (226/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_5859   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_220722

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     3e-93
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5860   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGTTGG  90
V  92.4% (231/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...........................C...  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  L  G  S  G  S  S  T  H  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_5860   91   AGTGGGTCTCAGCGATTCTTGGGAGCGGTAGTAGCACACACTACTCAGACTCCGTAAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  92.4% (231/250)  IGHV3-23*01  137  .............T...AG...T..T...G........T.....G..........G...........................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_5860   181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  92.4% (231/250)  IGHV3-23*01  227  ...............................G....................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5860   271  ATTCACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_220723

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD5-18*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATAGTC	ATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATAGTCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	114	0	0	100
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	235	7	0	97.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  V  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_5861   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGTCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  97.1% (235/242)  IGHV4-59*01  50   .....TCC...A..................G...........................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  N  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_5861   94   GGATTGGGTATATCTACAACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  97.1% (235/242)  IGHV4-59*01  140  ................TT........................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D  
                    Query_5861   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATATAGTCATGGTTACGGAGGAGTTGACT  273
V  97.1% (235/242)  IGHV4-59*01  230  ..............................................................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD5-18*01  13   ---------------------------------------------------------------------........-------------  20
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------------------------------------------......  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5861   274  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (42/42)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_220720

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*04                                                                                         399     3e-113
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*04	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCCACGAGAGATAT	GGGGAGTT	CTC	TGATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCACGAGAGATATGGGGAGTTCTCTGATTAC	ARLHERYGEFSDY	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	75	72	67	5	0	93.1
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	106	8	0	93
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  Q  A  S  G  F  T  F  T  T 
                    Query_5862     4    GTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTCAGGCCTCTGGATTCACCTTTACCACC  93
V  93.8% (273/291)  IGHV5-10-1*04  4    ..G........G...................................................A...GT.......A..G........G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  F  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 
                    Query_5862     94   TACTTCATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAACTACAGC  183
V  93.8% (273/291)  IGHV5-10-1*04  94   ....GG....................................................................................  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  Q  G  Q  V  T  L  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  R  L  K  A  S  D  S 
                    Query_5862     184  CCGTCCTTCCAAGGACAGGTCACCCTCTCTGTTGACAAGTCCATCAGTACTGCCTACCTGCAGTGGAGCAGGCTGAAGGCCTCGGACTCC  273
V  93.8% (273/291)  IGHV5-10-1*04  184  ..............C.........A....A.C...............C.......................C...............A..  273
                                         P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><--------------CDR3-IMGT-------------->                                  
                                         A  M  Y  Y  C  A  R  L  H  E  R  Y  G  E  F  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5862     274  GCCATGTACTACTGTGCGAGACTCCACGAGAGATATGGGGAGTTCTCTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  361
V  93.8% (273/291)  IGHV5-10-1*04  274  ........T............-------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD3-10*01    16   ------------------------------------........--------------------------------------------  23
J  97.6% (40/41)    IGHJ4*02       8    -----------------------------------------------...C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_143382

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           311     4e-87
IGHD1-20*01                                                                                           10.3    120  
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-20*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGCCCGAAAGAGAAGCC	TATAA	TAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGCCCGAAAGAGAAGCCTATAATAATGATGGTTTTGATATT	ARLPEREAYNNDGFDI	239	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	10	1	0	90.9
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	17	7	0	70.8
FR3-IMGT	125	238	114	110	4	0	96.5
CDR3-IMGT (germline)	239	243	5	5	0	0	100
Total	N/A	N/A	229	214	15	0	93.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  A  G  F  T  F  S  Y  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  S  I  
                    Query_5863   15   GTGCAGCCGCTGGATTCACCTTCAGTTACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCGCATCCATTA  104
V  93.4% (214/229)  IGHV3-21*01  65   ........T.................AG....................................................T.........  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  R  T  D  F  I  Y  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  A  K  N  S  L  F  L  
                    Query_5863   105  GTTCTAGGACTGATTTCATATACTACGCAGACTCAGTGACGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTTTCTGC  194
V  93.4% (214/229)  IGHV3-21*01  155  ..AG...T.G.AG..A.......................A............................................A.....  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  H  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  L  P  E  R  E  A  Y  N  N  D  G  F  D  
                    Query_5863   195  AAATGCACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGGCTGCCCGAAAGAGAAGCCTATAATAATGATGGTTTTGATA  284
V  93.4% (214/229)  IGHV3-21*01  245  .....A............C..............................-----------------------------------------  293
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (5/5)     IGHD1-20*01  3    --------------------------------------------------------------------.....-----------------  7
J  94.0% (47/50)    IGHJ3*02     1    ----------------------------------------------------------------------------.....C........  14

                                      ->                                  
                                      I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5863   285  TTTGGGGCCAAGGGACAATGGTCACCGTCTCCTCAG  320
J  94.0% (47/50)    IGHJ3*02     15   .C.............................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_199492

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           297     7e-83
IGHD3-3*01                                                                                            12.2    31   
IGHJ3*01                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCT	TTACGA	GGGGCTAACTTTTCCTT	TCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCTTTACGAGGGGCTAACTTTTCCTTTC	ARDLYEGLTFPF	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	217	27	0	88.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  P  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_5864   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTCCTTACTTCTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAGT  93
V  88.9% (217/244)  IGHV4-59*01  50   .....TCC...A....C........................AG.....A........................A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  Y  I  N  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  N  S  
                    Query_5864   94   GGCTAGGATATATCAATTACACTGGGAGTACCAACTACAATCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAACAGCC  183
V  88.9% (217/244)  IGHV4-59*01  140  ..A.T..G......T......G......C...........C..................G.........................G.A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  E  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  Y  E  G  L  T  F  P  
                    Query_5864   184  AATTCTCCCTGGAGTTGTCTTCTGTGACCGCTGCGGACACGGCCGTGTACTATTGTGCGAGAGACCTTTACGAGGGGCTAACTTTTCCTT  273
V  88.9% (217/244)  IGHV4-59*01  230  .G.........A..C..AGC.............................T..C...........--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD3-3*01   4    -------------------------------------------------------------------......-----------------  9

                                      ->                                  
                                      F  W  G  P  G  T  M  V  T  V  S  S  
                    Query_5864   274  TCTGGGGCCCAGGGACAATGGTCACCGTCTCCTCAG  309
J  94.4% (34/36)    IGHJ3*01     15   .........A.....................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_92910

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*05                                                                                           339     2e-95
IGHD1-20*01                                                                                           10.3    121  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*05	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCCTACCAAAAGTACGAAA	GGTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCCTACCAAAAGTACGAAAGGTATTACTTTGACTCT	ARVPYQKYERYYFDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  D  Y  Y  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_5865   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTGACTACTATATGACGTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-11*05  47   ....................................C...............C....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  T  A  S  S  I  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5865   91   AGTGGGTTTCATTCATTACTGCTAGTAGTATTTACACAAACTACGCAGACTCTGTGAAGGGCCGATTCACCATTTCCAGAGACAACGCCA  180
V  93.6% (233/249)  IGHV3-11*05  137  ............A.....G.AG........G..........................................C................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  V  P  Y  Q  K  Y  E  
                    Query_5865   181  AGAATTCACTATATCTCCAGATGAACAGCCTGAGAGCCGAGGACACGGCCATCTATTACTGTGCGAGAGTTCCCTACCAAAAGTACGAAA  270
V  93.6% (233/249)  IGHV3-11*05  227  ....C.....G.....G..A..............................G.G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ---------------->                                  
                                      R  Y  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5865   271  GGTATTACTTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (5/5)     IGHD1-20*01  1    .....----------------------------------------------  5
J  95.7% (44/46)    IGHJ4*02     3    -----..........AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_220728

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           347     7e-98
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TTTAGGTCTTCTCCGTTGCGTCTTAGGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGGTCTTCTCCGTTGCGTCTTAGGCTTC	ARDLGLLRCVLGF	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  T  S  G  F  P  F  S  N  Y  G  F  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5866   1    GGTCCCTGAGACTCTCCTGTACAACGTCTGGATTCCCCTTCAGTAACTATGGCTTCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-33*01  47   ....................G..G...........A.........G.......A.G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  Y  D  G  R  D  E  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5866   91   AGTGGGTGGCACTTATCTGGTATGATGGAAGAGATGAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (236/250)  IGHV3-33*01  137  ...........G....A..............TA..A....C.................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  G  L  L  R  C  
                    Query_5866   181  AGAACACCCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATTTAGGTCTTCTCCGTTGCG  270
V  94.4% (236/250)  IGHV3-33*01  227  .......G............................................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ---------->                                  
                                      V  L  G  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5866   271  TCTTAGGCTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (35/35)   IGHJ4*02     14   ----------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_220729

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           235     4e-64
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	ARGLLIEDPNYVWGSFRRNHNCYTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	91	23	0	79.8
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	197	47	0	80.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  R  L  E 
                    Query_5867   1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGGACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGAGACTGGAG  90
V  80.7% (197/244)  IGHV4-59*01  49   ..................A....C.......G.......A.T.G..........AG....A.C........C.......A.G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  N  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_5867   91   TGGCTTGGCTTCTTCTTATCCACTGGCAACACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  80.7% (197/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G...G.G....A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  H  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  N  Y 
                    Query_5867   181  CAGTTGTCTCTCCACCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCAACTAT  270
V  80.7% (197/244)  IGHV4-59*01  229  .....C..C..GA.G....G.TCT.....................GT.....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  R  G  T  P  V  T  V  S  S  
                    Query_5867   271  GTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCGAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  92.1% (35/38)    IGHJ3*01     13   --------------------------------------...........A.......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_228551

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           343     2e-96
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  A  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5868   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGGCCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (232/245)  IGHV4-59*01  49   .......................................A...G..........AG..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_5868   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_5868   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  94.7% (232/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  93.1% (54/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  P  S 
                    Query_5868   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCCCCTCA  306
J  93.1% (54/58)    IGHJ6*02     27   .........................C....T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_228550

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           371     7e-105
IGHD3-3*01                                                                                            31.5    6e-05 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAGTCGTACCGGCTTTCCGGCAAATTCCCAATC	ACGATTTTTGGAGTGG	CTGACCGACGACAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCAGTCGTACCGGCTTTCCGGCAAATTCCCAATCACGATTTTTGGAGTGGCTGACCGACGACAAGTACGGTATGGACGTC	ARDLSRTGFPANSQSRFLEWLTDDKYGMDV	240	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	242	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5869   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (242/247)  IGHV3-53*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  T  G  D  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  K  
                    Query_5869   91   AGTGGGTCTCAGTTATTTATACCGGTGACAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATACCAAGA  180
V  98.0% (242/247)  IGHV3-53*01  137  .....................G.....GT......................................................T......  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><------------------------------
                                      N  M  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  S  R  T  G  F  P  
                    Query_5869   181  ACATGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGATCTCAGTCGTACCGGCTTTCCGG  270
V  98.0% (242/247)  IGHV3-53*01  227  ...C...............................................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          

                                      ----------CDR3-IMGT--------------------------------------->                               
                                      A  N  S  Q  S  R  F  L  E  W  L  T  D  D  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  
                    Query_5869   271  CAAATTCCCAATCACGATTTTTGGAGTGGCTGACCGACGACAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCT  360
D  100.0% (16/16)   IGHD3-3*01   6    -------------................-------------------------------------------------------------  21
J  100.0% (48/48)   IGHJ6*02     15   --------------------------------------------..............................................  60

                                        
                                      S 
                    Query_5869   361  CA  362
J  100.0% (48/48)   IGHJ6*02     61   ..  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_228552

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           318     6e-89
IGHD3-22*01                                                                                           12.2    31   
IGHJ3*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TC	ATGATA	AACCTAGATCTTGTC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCATGATAAACCTAGATCTTGTCTTTGATATC	AKVMINLDLVFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  I  F  S  N  F  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5870   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCATCTTTAGCAACTTTGGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-23*01  47   ................................T...C........G..A..C.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  S  D  S  G  E  R  T  E  F  A  D  S  V  K  G  R  F  T  M  S  R  D  N  S  
                    Query_5870   91   AGTGGGTCGCGTTTATTAGTGATAGTGGTGAGCGCACAGAGTTCGCGGACTCCGTGAAGGGCCGGTTCACCATGTCCAGAGACAATTCCA  180
V  90.8% (226/249)  IGHV3-23*01  137  ........T.AGC........G........GTA.....T.C.A...A..........................C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      R  N  T  L  Y  L  Q  M  N  R  L  R  V  D  D  T  A  V  Y  Y  C  A  K  V  M  I  N  L  D  L  
                    Query_5870   181  GGAACACGCTGTATCTGCAAATGAACAGGCTGAGAGTCGACGACACGGCCGTATATTACTGTGCGAAAGTCATGATAAACCTAGATCTTG  270
V  90.8% (226/249)  IGHV3-23*01  227  A...........................C.......C...G............................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD3-22*01  9    -----------------------------------------------------------------------......-------------  14

                                      ---------->                                  
                                      V  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_5870   271  TCTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  315
J  97.7% (42/43)    IGHJ3*02     8    --........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_228555

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            363     1e-102
IGHD3-16*01                                                                                           50.7    9e-11 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAAGG	ATTATGATTACGTTTGGGGGAGTTAT	TCTCTCGAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAAGGATTATGATTACGTTTGGGGGAGTTATTCTCTCGAGTAC	ARDKDYDYVWGSYSLEY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  N  M  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5871   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTTAATATGTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-7*01   47   ........................C.................G..GC...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5871   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAACACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (241/250)  IGHV3-7*01   137  ......................................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  K  D  Y  D  Y  V  
                    Query_5871   181  GGAACTCTCTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTGTATTACTGTGCGAGAGACAAGGATTATGATTACGTTT  270
V  96.4% (241/250)  IGHV3-7*01   227  A......A................................G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (26/26)   IGHD3-16*01  3    ---------------------------------------------------------------------------...............  17

                                      GT-------------------->                                  
                                      W  G  S  Y  S  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5871   271  GGGGGAGTTATTCTCTCGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (26/26)   IGHD3-16*01  18   ...........----------------------------------------------  28
J  100.0% (37/37)   IGHJ4*02     12   --------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_228554

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         411     5e-117
IGHD4-17*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATTTTCA	TGACTACGATGAC	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTCATGACTACGATGACAACTACTTTGCCCAG	ARHFHDYDDNYFAQ	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	276	13	0	95.5


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  D  T  F  T  N  Y
                    Query_5872     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGAGACACCTTTACCAACTA  90
V  95.5% (276/289)  IGHV5-10-1*01  6    .........................................................................T...G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  R  P  G  K  G  L  E  W  M  G  R  I  D  P  R  E  S  Y  N  D  Y  S  P
                    Query_5872     91   CTGGATCAGCTGGGTGCGCCAGAGGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTCGTGAATCTTATAACGATTACAGCCC  180
V  95.5% (276/289)  IGHV5-10-1*01  96   .......................T........................................A....C.......C.A.C........  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  S  I  S  A  D  Q  S  T  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_5872     181  GTCCTTCCAAGGCCACGTCAGCATCTCAGCTGATCAGTCCACCAGCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (276/289)  IGHV5-10-1*01  186  ....................C............CA......T................................................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------CDR3-IMGT--------------->                                  
                                          M  Y  Y  C  A  R  H  F  H  D  Y  D  D  N  Y  F  A  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5872     271  CATGTATTACTGTGCGAGACATTTTCATGACTACGATGACAACTACTTTGCCCAGTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  359
V  95.5% (276/289)  IGHV5-10-1*01  276  ...................----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                       
D  92.3% (12/13)    IGHD4-17*01    1    ---------------------------........G....-------------------------------------------------  13
J  91.7% (44/48)    IGHJ4*02       1    -----------------------------------------.........A.T.C.......................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_206907

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           364     5e-103
IGHD1-26*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TC	GTGGGAGCTACT	GGTCGGCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGTGGGAGCTACTGGTCGGCCTTTTGACTAC	ARVVGATGRPFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_5873   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-48*03  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  H  T  I  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5873   91   AATGGGTTTCATACATTAGTAGTAGTGGTCATACCATAGACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (241/249)  IGHV3-48*03  137  .G...........................AG.......T...................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  H  C  A  R  V  V  G  A  T  G  R  
                    Query_5873   181  AGAACTCACTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATCACTGTGCGAGAGTCGTGGGAGCTACTGGTCGGC  270
V  96.8% (241/249)  IGHV3-48*03  227  ............A...........................................T............---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD1-26*01  7    -----------------------------------------------------------------------............-------  18

                                      ---------->                                  
                                      P  F  D  Y  G  G  Q  G  T  Q  V  T  V  S  S  
                    Query_5873   271  CTTTTGACTACGGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  315
J  95.3% (41/43)    IGHJ4*02     6    --.........T...............T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_228556

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCGGAGGTTCC	ACTATGG	CCACCTGACCCCAC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCGGAGGTTCCACTATGGCCACCTGACCCCACTTGAGTAC	ASRRFHYGHLTPLEY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  N  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_5874   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAACTGGGTCCGCCAGACCCCAGGGAGGGGGCTGGAG  90
V  92.1% (223/242)  IGHV4-34*01  49   .......................................................G....A........C.........A..........  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  V  N  H  S  G  N  S  N  S  N  P  S  L  K  S  R  V  T  I  L  V  D  T  S  K  N 
                    Query_5874   91   TGGCTTGGGGAGGTCAATCATAGTGGCAACAGCAACTCCAACCCGTCCCTCAAGAGTCGAGTCACCATATTAGTCGACACGTCCAAGAAC  180
V  92.1% (223/242)  IGHV4-34*01  139  ...A.......AA.............A.G..C.....A................................C...A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  S  R  R  F  H  Y  G  H  L  T 
                    Query_5874   181  CAGTTCTCCCTGAAACTGACTTCTGTGACCGCCGCGGACACGGCTCTTTATTATTGTGCGAGTCGGAGGTTCCACTATGGCCACCTGACC  270
V  92.1% (223/242)  IGHV4-34*01  229  ..............G....GC........................G.G.....C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD3-10*01  6    -------------------------------------------------------------------------.......----------  12

                                      ----------->                                  
                                       P  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5874   271  CCACTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.6% (41/42)    IGHJ4*02     7    ----....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_228559

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           385     5e-109
IGHD3-22*01                                                                                           18.0    0.69  
IGHJ3*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCCAATGGGGGCCGACA	TATGATGCTACTAGTTATTAC	ACGC	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCCAATGGGGGCCGACATATGATGCTACTAGTTATTACACGCATGGTTTTGATATG	ARSQWGPTYDATSYYTHGFDM	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	267	21	0	92.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  N  Y 
                    Query_5875   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGTAACTAT  91
V  92.7% (267/288)  IGHV1-69*01  7    .................G.................................................................C.G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  R  F  G  S  P  I  Y  S  Q 
                    Query_5875   92   GCTATCAGTTGGGTCCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTAGGTTTGGTTCACCAATCTACTCACAG  181
V  92.7% (267/288)  IGHV1-69*01  97   ........C.....G.................................................TC......A..G...A....G.....  186
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  R  G  R  V  T  I  T  A  A  E  T  T  G  T  A  Y  M  A  L  S  S  L  R  S  G  D  T  A 
                    Query_5875   182  AAGTTCCGGGGCAGAGTCACAATTACCGCGGCCGAAACCACGGGCACAGCCTACATGGCGTTGAGCAGCCTGAGATCTGGCGACACGGCC  271
V  92.7% (267/288)  IGHV1-69*01  187  .......A............G..........A....T.....A...............A.C..................AG.........  276
                                       K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><--------------------------CDR3-IMGT-------------------------->               
                                       V  Y  Y  C  A  R  S  Q  W  G  P  T  Y  D  A  T  S  Y  Y  T  H  G  F  D  M  W  G  Q  G  T 
                    Query_5875   272  GTTTATTACTGTGCGAGATCCCAATGGGGGCCGACATATGATGCTACTAGTTATTACACGCATGGTTTTGATATGTGGGGCCAAGGGACA  361
V  92.7% (267/288)  IGHV1-69*01  277  ..G...............------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  81.0% (17/21)    IGHD3-22*01  8    ------------------------------------......AG..G.G........---------------------------------  28
J  93.8% (45/48)    IGHJ3*02     3    -------------------------------------------------------------...C.........C...............  31

                                                         
                                       T  V  T  V  S  S  
                    Query_5875   362  ACGGTCACCGTCTCTTCAG  380
J  93.8% (45/48)    IGHJ3*02     32   .T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_229602

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           344     6e-97
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	CAGG	ACTATGATAGTAGT	AGGGGGG	ACGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAGGACTATGATAGTAGTAGGGGGGACGATAAGGACGTC	VRQDYDSSRGDDKDV	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	251	6	5	1	0	83.3
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_5876   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  94.4% (234/248)  IGHV4-31*02  50   .....TCC...A...................................G..........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  S  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  S  M  S  V  D  T  S  
                    Query_5876   94   TGGAGTGGATTGGATACATCTATTCCAGTGGGAGTACCTACTACAACCCGTCCCTCAAGAGTCGAGTTAGCATGTCCGTAGACACGTCTA  183
V  94.4% (234/248)  IGHV4-31*02  140  .............G..........A.........C..................................C...A..A.............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  H  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  Q  D  Y  D  S  S  R  
                    Query_5876   184  AGAACCACTTCTCCCTGAACCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGTGAGACAGGACTATGATAGTAGTAGGG  273
V  94.4% (234/248)  IGHV4-31*02  230  .......G...........G...........................................C....----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD3-22*01  6    ------------------------------------------------------------------------..............----  19

                                      ---------------->                                 
                                      G  D  D  K  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5876   274  GGGACGATAAGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  95.7% (45/47)    IGHJ6*02     16   ---...G..T........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_229603

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43D*01                                                                                          378     3e-107
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43D*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TAAAGAGGGCCGAATTCTCGGA	TATTAGTATGGTTCGAGGAGT	CCCCACTATATCTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATATAAAGAGGGCCGAATTCTCGGATATTAGTATGGTTCGAGGAGTCCCCACTATATCTCACTACTACTATGGTATGGACGTC	AKDIKRAEFSDISMVRGVPTISHYYYGMDV	243	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	252	10	10	0	0	100
Total	N/A	N/A	252	247	5	0	98


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5877    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATACACTGGGTCCGTCAAGCTCCGGGGAAGGGTCTGG  90
V  98.0% (247/252)  IGHV3-43D*01  47   .......................................................G..................................  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  S  L  I  S  W  D  G  G  N  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  G  N  S  
                    Query_5877    91   AGTGGGTCTCTCTTATTAGTTGGGATGGTGGTAACACACACTATGCAGACTCTGTGAAGGGTCGATTCACCATCTCCAGAGGCAACAGCA  180
V  98.0% (247/252)  IGHV3-43D*01  137  .................................G...CT..........................................A........  226
                                       E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><---------------------------
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  I  K  R  A  E  F  
                    Query_5877    181  AAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACCGCCTTGTATTACTGTGCAAAAGATATAAAGAGGGCCGAATTCT  270
V  98.0% (247/252)  IGHV3-43D*01  227  ........................................................................------------------  298
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                       -------------CDR3-IMGT--------------------------------------->                            
                                       S  D  I  S  M  V  R  G  V  P  T  I  S  H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  A  V  T  V  
                    Query_5877    271  CGGATATTAGTATGGTTCGAGGAGTCCCCACTATATCTCACTACTACTATGGTATGGACGTCTGGGGCCAGGGGACCGCGGTCACCGTCT  360
D  90.5% (19/21)    IGHD3-10*01   2    ----.....C.........G.....-----------------------------------------------------------------  22
J  94.6% (53/56)    IGHJ6*02      7    ---------------------------------------..........C....................A......A............  57

                                            
                                       S  S 
                    Query_5877    361  CCTCA  365
J  94.6% (53/56)    IGHJ6*02      58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_204969

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*03                                                                                           327     9e-92
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GGACG	ATATCAGCACCTGGTA	AG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGGGACGATATCAGCACCTGGTAAGGACTAC	VRGTISAPGKDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5878   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACCTTCAGTACCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-74*03  47   ............................T................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  V  D  G  D  G  R  I  T  Q  Y  A  D  S  V  K  G  R  F  T  M  S  R  D  N  A  
                    Query_5878   91   TTTGGGTCTCACGTGTGGATGGTGATGGACGTATCACACAGTACGCGGACTCCGTGAAGGGCCGATTCACCATGTCCAGAGACAACGCCA  180
V  92.0% (229/249)  IGHV3-74*03  137  .G............A.TA..A.......GA...G....AC.................................C................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  D  L  N  S  L  G  T  E  D  T  A  V  Y  Y  C  V  R  G  T  I  S  A  P  G  
                    Query_5878   181  AGAACACACTGTATCTGGATTTGAACAGTCTGGGAACCGAGGACACGGCTGTGTATTACTGTGTAAGAGGGACGATATCAGCACCTGGTA  270
V  92.0% (229/249)  IGHV3-74*03  227  .......G.........C.AA...........A..G...........................C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD6-13*01  5    --------------------------------------------------------------------------...G.....G......  20

                                      ------->                                  
                                      K  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5878   271  AGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (40/40)   IGHJ4*02     9    --........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_229606

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           363     2e-102
IGHD1-26*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GA	GGTGTAGTGGGAGC	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTAC	ARGGVVGAPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	261	29	0	90


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  T  A  G  G  S  F  S  S  Y
                    Query_5879   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGACCGCTGGAGGTAGTTTCAGCAGCTA  90
V  90.0% (261/290)  IGHV1-69*06  6    ..................G...........................................A.G.TT.......C.CC...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  M  R  Q  A  P  G  Q  G  L  E  W  M  G  A  I  M  P  L  Y  G  I  G  N  Y  A  Q
                    Query_5879   91   TGCTATCAGTTGGATGCGACAGGCCCCTGGGCAAGGGCTTGAGTGGATGGGAGCAATCATGCCTCTATATGGCATAGGAAACTACGCACA  180
V  90.0% (261/290)  IGHV1-69*06  96   .........C...G................A......................GG.....C...A.C.T...T.C..C............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  K  V  T  I  T  A  D  T  S  T  R  T  A  Y  M  E  L  S  G  L  R  S  A  D  T  A
                    Query_5879   181  GAAGTTCCAGGGCAAAGTCACGATTACCGCGGACACATCCACGAGGACAGCCTACATGGAGTTGAGTGGCCTGAGATCTGCGGACACGGC  270
V  90.0% (261/290)  IGHV1-69*06  186  ..............G....................A.........C...............C....CA............A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  G  G  V  V  G  A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_5879   271  CATGTATTATTGTGCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTACTGGGGCCAGGGAACTCTGGTCACCGTCTCCCCAG  353
V  90.0% (261/290)  IGHV1-69*06  276  .G.......C..........---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  92.9% (13/14)    IGHD1-26*01  1    ----------------------...A..........-----------------------------------------------  14
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------------........................C...............T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_229607

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGTACCA	N/A	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGTACCAACTGCTACTACCAAATGGACGTC	ARVDCSSTNCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_5880   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.0% (222/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_5880   91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.0% (222/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  N  C  Y 
                    Query_5880   181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTATTGTGCGAGAGTGGACTGTAGTAGTACCAACTGCTAC  270
V  91.0% (222/244)  IGHV4-59*01  229  C..............................CT..............G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD2-2*01   8    ---------------------------------------------------------------------.............--------  20
J  87.5% (49/56)    IGHJ6*02     7    ----------------------------------------------------------------------------------...A....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  T  V  F  V  S  S 
                    Query_5880   271  TACCAAATGGACGTCTGGGGCCTAGGGACCACGGTCTTCGTCTCCTCA  318
J  87.5% (49/56)    IGHJ6*02     15   ...GGT................A.............AC..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_229605

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           290     2e-80
IGHD2-21*01                                                                                           12.2    32   
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGATCGGCTCC	GGTGAT	GGGATTCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGATCGGCTCCGGTGATGGGATTCGTTTTGACTCC	AKGIGSGDGIRFDS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	217	32	0	87.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  V  M  A  W  V  R  H  V  P  G  K  G  L  
                    Query_5881   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCAGGATTCACCTTCAGCAGCTATGTCATGGCCTGGGTCCGACACGTTCCAGGGAAGGGGCTGG  90
V  87.1% (217/249)  IGHV3-23*01  47   ......................A.....T...........T..........C....AG.........C..G.C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  R  G  G  A  A  P  S  T  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_5881   91   AGTGGGTCTCAAGCATTAGTGGACGTGGTGGTGCTGCACCCTCCACAGACTCCGTGAAGGGCCGCTTCAGCATCTCCAGAGACAATTCCG  180
V  87.1% (217/249)  IGHV3-23*01  137  ...........GCT........TA........AGCA..TA..A.G...................G....C...................A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      E  N  T  L  H  L  Q  M  N  S  L  R  V  E  D  T  A  T  Y  Y  C  A  K  G  I  G  S  G  D  G  
                    Query_5881   181  AAAACACCCTGCATCTACAAATGAACAGCCTGAGAGTCGAGGACACGGCCACATATTACTGTGCGAAAGGGATCGGCTCCGGTGATGGGA  270
V  87.1% (217/249)  IGHV3-23*01  227  .G.....G...T....G...................C.............GT.................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-21*01  14   --------------------------------------------------------------------------------......----  19

                                      ------------->                             
                                      I  R  F  D  S  W  G  Q  G  A  L  V  I  V  S
                    Query_5881   271  TTCGTTTTGACTCCTGGGGCCAGGGAGCCCTGGTCATCGTCTC  313
J  92.1% (35/38)    IGHJ4*02     6    -----.......A.............A.........C......  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_18381

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           353     1e-99
IGHD2-15*01                                                                                           14.1    10   
IGHJ5*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACTCCACCTTTAAAATTT	GATATTG	ATGGTTTCCCTGAGGCCCCCGCGAT	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACTCCACCTTTAAAATTTGATATTGATGGTTTCCCTGAGGCCCCCGCGATCTGGCTCGACCCC	ARTPPLKFDIDGFPEAPAIWLDP	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	257	31	0	89.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  S  S  V  K  V  S  C  R  A  S  G  G  T  F  G  T  Y
                    Query_5882   1    GCAGCTGGTGCAGTCTGGAGCTGAGATGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGGCTTCTGGAGGCACCTTCGGTACCTA  90
V  89.2% (257/288)  IGHV1-69*06  6    ..................G......G....................................A...................A.C.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  V  T  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  G  F  I  P  I  F  G  T  A  N  N  T  Q
                    Query_5882   91   TGGAGTGACCTGGGTGCGGCAGGCCCCGGGACAACGACTTGAGTGGATGGGAGGGTTCATCCCCATCTTTGGAACAGCAAACAACACACA  180
V  89.2% (257/288)  IGHV1-69*06  96   ..CTA.C.G.........A........T......G.G..................A.......T........T.........T..G....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  M  D  K  A  T  N  T  A  Y  M  E  L  S  R  L  T  S  D  D  T  A
                    Query_5882   181  GAAGTTCCAGGGCAGAGTCACGATCACCATGGACAAAGCCACGAACACAGCCTACATGGAGCTGAGCAGGCTGACTTCTGACGACACGGC  270
V  89.2% (257/288)  IGHV1-69*06  186  ........................T...GC.......T......G........................C....GA.....G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        I  Y  Y  C  A  R  T  P  P  L  K  F  D  I  D  G  F  P  E  A  P  A  I  W  L  D  P  W  G  Q
                    Query_5882   271  CATCTATTACTGTGCGAGGACTCCACCTTTAAAATTTGATATTGATGGTTTCCCTGAGGCCCCCGCGATCTGGCTCGACCCCTGGGGCCA  360
V  89.2% (257/288)  IGHV1-69*06  276  .G.G..............------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  100.0% (7/7)     IGHD2-15*01  3    -------------------------------------.......----------------------------------------------  9
J  97.9% (46/47)    IGHJ5*02     5    ---------------------------------------------------------------------....T................  25

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_5882   361  GGGAACCCTGGTCACCGTCTCCTCAG  386
J  97.9% (46/47)    IGHJ5*02     26   ..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_12455

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           380     1e-107
IGHD3-16*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACAAGCGGGCGGCACC	TTTGGGG	CGAGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTAC	ARGQAGGTFGASDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  S  F  N  D  Y 
                    Query_5883   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAATGAAGGTCTCCTGCAAGGCTTCCGGTTACAGCTTTAACGACTAT  91
V  92.0% (266/289)  IGHV1-18*01  7    .............................................G......................T.......C.....C.AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  M  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  A  Y  N  G  N  T  K  Y  S  E 
                    Query_5883   92   GGTATCACTTGGATGCGACAGGCCCCTGGACAGGGGCCTGAGTGGATGGGATGGATCAGCGCATATAATGGTAACACAAAGTATTCAGAG  181
V  92.0% (266/289)  IGHV1-18*01  97   .......GC...G...................A....T........................T..C..............C...G..C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  L  Q  G  R  L  I  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_5883   182  AGGCTCCAGGGCAGACTCATCATGACCACAGACACATCCACGAGCACAGCCTACATGGAATTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.0% (266/289)  IGHV1-18*01  187  .A.............G...C.......................................GC.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  G  Q  A  G  G  T  F  G  A  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5883   272  GTCTATTATTGTGCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  92.0% (266/289)  IGHV1-18*01  277  ..G.....C..........---------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD3-16*01  15   ------------------------------------.......---------------------------------------------  21
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_104194

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     6e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_5884   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_5884   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_5884   181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_5884   271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_239913

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           316     2e-88
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGCGGGGGGGG	ATTACTATGAGAATAGCGGTTATT	GGCTG	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGCGGGGGGGGATTACTATGAGAATAGCGGTTATTGGCTGGACTTC	ARAAGGDYYENSGYWLDF	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	20	4	0	83.3
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	19	5	0	79.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	232	217	15	0	93.5


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  S  F  S  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 
                    Query_5885   13   TGTGCAGCCTCTGGATTCAGTTTCAGTAGCTACACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATT  102
V  93.5% (217/232)  IGHV3-21*01  64   ...................CC...........T.G.......................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  R  V  S  K  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  T  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_5885   103  AGTCGTGTTAGTAAGTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCACGTCCAGAGACAACGCCAAGAACTCACTGTATCTG  192
V  93.5% (217/232)  IGHV3-21*01  154  ...A..AG.....GT........................................TC.................................  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------------------CDR3-IMGT-------------
                                       Q  M  G  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  A  A  G  G  D  Y  Y  E  N  S  G  Y  W 
                    Query_5885   193  CAAATGGGCAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGAGAGCGGCGGGGGGGGATTACTATGAGAATAGCGGTTATTGG  282
V  93.5% (217/232)  IGHV3-21*01  244  ......AA.........................G.G................--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  87.5% (21/24)    IGHD3-22*01  3    ----------------------------------------------------------------..........T.G...T.......--  26

                                      -------->                                  
                                       L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5885   283  CTGGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.5% (39/40)    IGHJ4*02     9    ---....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_239912

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           430     1e-122
IGHD2-15*01                                                                                           41.1    8e-08 
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACAACCCAGCCCCG	ATTGTAGTGGTGGTAGCTGCT	CCGTCGTTT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACAACCCAGCCCCGATTGTAGTGGTGGTAGCTGCTCCGTCGTTTACAACTGGTTCGACCCC	ARTQPSPDCSGGSCSVVYNWFDP	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  S  F  S  N  Y
                    Query_5886   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCAGCTTCAGCAACTA  90
V  97.6% (282/289)  IGHV1-69*06  6    ..................G..........................................................C........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  L  F  G  T  P  N  Y  A  Q
                    Query_5886   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTCTCTTTGGTACACCAAACTACGCACA  180
V  97.6% (282/289)  IGHV1-69*06  96   ................................................................A...........G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_5886   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGTTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  97.6% (282/289)  IGHV1-69*06  186  .............................................................C............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  Y  C  A  R  T  Q  P  S  P  D  C  S  G  G  S  C  S  V  V  Y  N  W  F  D  P  W  G  Q
                    Query_5886   271  CGTCTATTACTGTGCGAGAACACAACCCAGCCCCGATTGTAGTGGTGGTAGCTGCTCCGTCGTTTACAACTGGTTCGACCCCTGGGGCCA  360
V  97.6% (282/289)  IGHV1-69*06  276  ...G...............-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (21/21)   IGHD2-15*01  6    -----------------------------------.....................----------------------------------  26
J  100.0% (51/51)   IGHJ5*02     1    -----------------------------------------------------------------.........................  25

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_5886   361  GGGAACCCTGGTCACCGTCTCCTCAG  386
J  100.0% (51/51)   IGHJ5*02     26   ..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_239911

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           300     9e-84
IGHD3-3*01                                                                                            12.2    34   
IGHJ3*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGGAGT	CTTGGACCTTGATGACGGTGCCATCCAACAGATCGGTGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGAGTCTTGGACCTTGATGACGGTGCCATCCAACAGATCGGTGTTTTTGATAAG	ARDGVLDLDDGAIQQIGVFDK	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  N  T  Y  G  M  Y  W  I  R  Q  A  P  G  K  G  L  
                    Query_5887   1    GGTCCCTGAGACTCTCCTGTGTAGCATCTGGATTCTCCTTCAATACTTATGGCATGTATTGGATTCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  88.4% (221/250)  IGHV3-33*01  47   .....................C...G.........A......G..GC.........C.C...G.C.........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  W  H  D  G  S  Q  K  F  Y  V  D  S  V  R  D  R  F  T  V  S  R  D  N  S  
                    Query_5887   91   AGTGGGTGGCATCTATATGGCATGATGGAAGTCAGAAATTCTATGTAGACTCTGTGAGGGACCGATTCACCGTCTCCAGAGACAATTCCA  180
V  88.4% (221/250)  IGHV3-33*01  137  ...........GT.......T...........A.T....A.....C......C....A..G..........A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      R  N  T  L  Y  L  Q  M  N  I  V  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  V  L  D  L  D  
                    Query_5887   181  GGAACACATTGTATCTGCAAATGAACATAGTGAGAGCCGAAGACACGGCTGTATATTACTGTGCGAGAGATGGAGTCTTGGACCTTGATG  270
V  88.4% (221/250)  IGHV3-33*01  227  A......GC..................GCC..........G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-3*01   14   ----------------------------------------------------------------------......--------------  19

                                      DR3-IMGT-------------------------->                                  
                                      D  G  A  I  Q  Q  I  G  V  F  D  K  C  G  Q  G  T  L  V  T  V  S  S  
                    Query_5887   271  ACGGTGCCATCCAACAGATCGGTGTTTTTGATAAGTGTGGCCAAGGGACATTGGTCACCGTCTCTTCAG  339
J  90.9% (40/44)    IGHJ3*02     7    -------------------------........TC..G............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_239917

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           366     2e-103
IGHD3-3*01                                                                                            12.2    37    
IGHJ6*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAGCGCC	CGATTT	CTCGGGAATCCTTA	TACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAGCGCCCGATTTCTCGGGAATCCTTATACTCCGTTATGGATGTC	AKDKRPISRESLYSVMDV	291	344	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	70	5	0	93.3
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	98	16	0	86
CDR3-IMGT (germline)	291	298	8	7	1	0	87.5
Total	N/A	N/A	296	265	31	0	89.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  S  F  T 
                    Query_5888   3    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACGTCTGGTTATAGTTTCACC  92
V  89.5% (265/296)  IGHV1-18*04  1    .....T.....G.........................A...............................G.T........C.CC..T...  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  V  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  K  G  N  T  H  Y 
                    Query_5888   93   AACTACGGTGTCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAAGGGTAACACACACTAT  182
V  89.5% (265/296)  IGHV1-18*04  91   .G.......A....C........................................................C..T.........A.....  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       G  Q  K  F  Q  G  R  V  V  M  T  T  E  T  S  T  S  T  V  Y  M  E  L  R  G  L  R  S  A  D 
                    Query_5888   183  GGTCAGAAGTTCCAGGGCAGAGTCGTCATGACGACAGAGACATCCACGAGCACAGTCTACATGGAGTTGCGGGGTCTGAGATCTGCCGAC  272
V  89.5% (265/296)  IGHV1-18*04  181  .CA......C..............AC......C.....C................C..........C..A..A.C..........A....  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  K  D  K  R  P  I  S  R  E  S  L  Y  S  V  M  D  V  W  G  Q  G  T  T 
                    Query_5888   273  ACGGCCGTCTATTACTGCGCGAAAGATAAGCGCCCGATTTCTCGGGAATCCTTATACTCCGTTATGGATGTCTGGGGCCAGGGGACCACG  362
V  89.5% (265/296)  IGHV1-18*04  271  ........G........T....G...----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD3-3*01   7    ----------------------------------......--------------------------------------------------  12
J  89.6% (43/48)    IGHJ6*02     12   ------------------------------------------------------....A..G......C...........A.........  47

                                                  
                                       F  T  V  S 
                    Query_5888   363  TTCACCGTCTCC  374
J  89.6% (43/48)    IGHJ6*02     48   G...........  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_199494

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           338     4e-95
IGHD6-25*01                                                                                           12.2    31   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGGAT	GCAGCG	AAATCAGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGGATGCAGCGAAATCAGGCTAC	ARGRDAAKSGY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  Y  H  M  T  W  V  R  Q  A  P  G  K  G  P  
                    Query_5889   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACTGTCAGTAGCTACCACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  93.9% (231/246)  IGHV3-53*01  47   .....................................C.........A..T......G.............................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  T  I  Y  F  D  G  T  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_5889   91   AGTGGGTCTCAACTATTTATTTCGATGGTACCACATTCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.9% (231/246)  IGHV3-53*01  137  ...........GT.......AG..G.....G.....A......A..............................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      N  T  L  F  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  R  D  A  A  K  S  G  
                    Query_5889   181  ACACGCTGTTTCTTCAATTGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGGCCGGGATGCAGCGAAATCAGGCT  270
V  93.9% (231/246)  IGHV3-53*01  227  .........A.......A................................................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (6/6)     IGHD6-25*01  8    --------------------------------------------------------------------------......----------  13
J  100.0% (38/38)   IGHJ4*02     11   ----------------------------------------------------------------------------------------..  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5889   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (38/38)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_179111

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD6-25*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTC	ARQSSAGRTKYGMDV	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	67	7	0	90.5
CDR1-IMGT	79	102	24	17	7	0	70.8
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	295	272	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  R  S  S  G  Y  D  F  L  
                    Query_5890   5    AGATGCAGCTGGTGCAGTCTGGAGCAGAGCTAAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGAGTTCTGGGTACGACTTTCTCG  94
V  92.2% (272/295)  IGHV5-51*01  2    ..G..........................G.G..A.....C.........................A.G.......A...AG....AC.A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_5890   95   ACTACTGGATCGTCTGGGTGCGCCAAATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACA  184
V  92.2% (272/295)  IGHV5-51*01  92   G...........G............G..........................................................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  
                    Query_5890   185  GTCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGCGCAGTCTGAAGGCCTCGGACA  274
V  92.2% (272/295)  IGHV5-51*01  182  .C...............................C...............C..................A....C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_5890   275  CCGCCAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCT  364
V  92.2% (272/295)  IGHV5-51*01  272  ......T..................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD6-25*01  7    --------------------------.......---------------------------------------------------------  13
J  100.0% (48/48)   IGHJ6*02     15   -----------------------------------------------...........................................  57

                                           
                                      S  S 
                    Query_5890   365  CCTCA  369
J  100.0% (48/48)   IGHJ6*02     58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_239919

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            304     9e-85
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              48.8    7e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	ACTATGGCAGTAGT	TGGTTCGGTTTG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCACTATGGCAGTAGTTGGTTCGGTTTGGACTCC	ARDHYGSSWFGLDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	95	19	0	83.3
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	221	27	0	89.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  S  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_5891   1    ACCCTGTCCCTCACCTGCGCTGTCTCTAGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  89.1% (221/248)  IGHV4-4*02   49   ...........................G..............................................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  Y  I  Y  Y  T  G  I  T  Y  Y  N  P  S  L  K  S  R  L  V  I  S  V  D  T  S  N 
                    Query_5891   91   GAGTGGATTGGTTACATCTATTACACTGGGATCACCTACTACAACCCGTCCCTCAAGAGTCGACTTGTCATCTCAGTCGACACTTCTAAC  180
V  89.1% (221/248)  IGHV4-4*02   139  ...........GG.A......C.T.G.....G....A..........................G.CAC...A.....A....AG..C..G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  F  V  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  H  Y  G  S  S  W  F 
                    Query_5891   181  AACCAGTTTTTTGTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCATTTATTACTGTGCGAGAGATCACTATGGCAGTAGTTGGTTC  270
V  89.1% (221/248)  IGHV4-4*02   229  ........C.CCC...A...............C...............G.G.................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  85.7% (12/14)    IGHD3-22*01  6    ----------------------------------------------------------------------......AT......------  19

                                      ----------->                                  
                                       G  L  D  S  W  G  Q  G  K  L  V  T  V  S  S  
                    Query_5891   271  GGTTTGGACTCCTGGGGCCAGGGAAAGCTGGTAACCGTCTCGTCAG  316
J  87.5% (35/40)    IGHJ4*02     9    ------....A..............CC.....C........C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_239918

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           352     3e-99
IGHD3-3*01                                                                                            14.1    8.1  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	236	11	0	95.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_5892   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGCC  93
V  95.5% (236/247)  IGHV4-31*02  50   .....TCC...A.....................C......C.............................C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_5892   94   TGGAATGGATCGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  95.5% (236/247)  IGHV4-31*02  140  ....G.....T...T.C.........................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  
                    Query_5892   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCG  273
V  95.5% (236/247)  IGHV4-31*02  230  ...................................................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  100.0% (51/51)   IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5892   274  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (51/51)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_308965

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           294     6e-82
IGHD3-10*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGTACAGACAGATT	TGGTTCG	CGGGGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGTACAGACAGATTTGGTTCGCGGGGGGACTAC	AKSTDRFGSRGDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  G  I  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5893   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGAGTCGGCATTAGCACCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.9% (218/248)  IGHV3-23*01  47   ............................T...T..AC.T......G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  L  S  G  S  S  D  K  T  Y  Y  L  G  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_5893   91   AGTGGGTGTCAGGTCTAAGTGGGAGCAGTGATAAGACATATTATTTAGGCTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAGTTCCA  180
V  87.9% (218/248)  IGHV3-23*01  137  .......C....C.A.T.....T..TG...G..GC.....C..CGC..A...................................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  R  M  R  I  E  D  T  A  V  Y  Y  C  A  K  S  T  D  R  F  G  S  
                    Query_5893   181  AGAACACGCTGTATCTGCAAATGAATAGAATGAGAATCGAGGACACGGCCGTATATTATTGCGCGAAAAGTACAGACAGATTTGGTTCGC  270
V  87.9% (218/248)  IGHV3-23*01  227  .........................C..CC.....GC.....................C..T......----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-10*01  10   ----------------------------------------------------------------------------------.......-  16

                                      ---------->                                  
                                      R  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5893   271  GGGGGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (40/40)   IGHJ4*02     9    -----........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_206905

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           375     2e-106
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTA	ACGATTT	ACATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACGATTTACATTATGGTATGGACGTC	ARVNDLHYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5894   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATTCGCCAGCACCCAGGGAAGGGC  90
V  98.0% (245/250)  IGHV4-31*03  49   ...................C................................................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  V  G  Y  M  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_5894   91   CTGGAGTGGGTTGGGTACATGTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.0% (245/250)  IGHV4-31*03  139  .........A..........C.....................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  D  L  H  Y  G 
                    Query_5894   181  AAGAACCAGCTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTTAACGATTTACATTATGGT  270
V  98.0% (245/250)  IGHV4-31*03  229  .........T............................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   6    -------------------------------------------------------------------------.......----------  12
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5894   271  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  312
J  100.0% (45/45)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_308966

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           336     1e-94
IGHD3-16*02                                                                                           43.0    2e-08
IGHJ3*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	TGCTGGGCTCCACCC	TTATGATTCCATTTCGGGGAGTTATCGTTAT	TCGCCGTGGA	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATGCTGGGCTCCACCCTTATGATTCCATTTCGGGGAGTTATCGTTATTCGCCGTGGACTTTTGATATC	ANAGLHPYDSISGSYRYSPWTFDI	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  R  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5895   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCTCCTTTAGGAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-23*01  47   ...............................A...A.......C..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  N  G  G  S  T  Y  Y  G  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_5895   91   AGTGGGTCTCAGGTATCAGTGGTAATGGTGGTAGCACCTACTACGGAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCGA  180
V  93.5% (231/247)  IGHV3-23*01  137  ............C...T.......G............A.......C...........A......G.......................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  A  N  A  G  L  H  P  Y  D  
                    Query_5895   181  AGAACACACTCTATCTGCAAATGAACAGCCTGAGAGTCGATGACACGGCCGTATATTACTGTGCGAATGCTGGGCTCCACCCTTATGATT  270
V  93.5% (231/247)  IGHV3-23*01  227  .......G..G.........................C...G..........................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.3% (28/31)    IGHD3-16*02  4    ----------------------------------------------------------------------------------........  11

                                      ----CDR3-IMGT------------------------------>                                 
                                      S  I  S  G  S  Y  R  Y  S  P  W  T  F  D  I  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_5895   271  CCATTTCGGGGAGTTATCGTTATTCGCCGTGGACTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCA  347
D  90.3% (28/31)    IGHD3-16*02  12   A.G...G................------------------------------------------------------  34
J  100.0% (44/44)   IGHJ3*02     6    ---------------------------------............................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_110359

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           313     1e-87
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGGCAA	TAGTGGCTATTAC	GGAT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGTGGGCAATAGTGGCTATTACGGATACTTCTTTGACTAC	VRVGNSGYYGYFFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	13	8	0	61.9
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  V  S  S  V  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5896   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCGTCAGCAGTGTTGGTTACTACTGGAGCTGGATCCGTCAGCACCCAGGGAAGGGC  90
V  90.0% (225/250)  IGHV4-31*01  49   ...............................G....A.........G........................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  T  H  Y  K  E  N  S  Y  Y  N  P  S  L  R  N  L  V  T  I  S  L  D  T  S 
                    Query_5896   91   CTGGAGTGGATTGGGTTCACTCATTACAAGGAGAACAGCTACTACAACCCGTCCCTCCGGAACCTCGTCACCATATCATTAGACACGTCT  180
V  90.0% (225/250)  IGHV4-31*01  139  ................A..TCT......GT.G..G..C...................AA..GT..A..T.........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  N  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  V  G  N  S  G  Y  Y 
                    Query_5896   181  AAGAACCAGTTCTCCCTGAACCTGACCTCTGTGACGGCCGCGGACACGGCCGTTTATTACTGTGTGAGAGTGGGCAATAGTGGCTATTAC  270
V  90.0% (225/250)  IGHV4-31*01  229  ....................G....G.........T.................G..........C.....--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD3-22*01  16   -----------------------------------------------------------------------------......T......  28

                                      ----------------->                                  
                                       G  Y  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5896   271  GGATACTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  97.9% (47/48)    IGHJ4*02     1    ----...A............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_110358

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           276     3e-76
IGHD4-4*01                                                                                            12.2    32   
IGHJ5*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD4-4*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TACCCCTGGGCATC	GTAACT	CCTGGGGT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGGATACCCCTGGGCATCGTAACTCCTGGGGTGACCTC	VRDTPGHRNSWGDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	213	37	0	85.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  D  Y  E  M  N  W  V  R  Q  V  P  G  R  G  L  
                    Query_5897   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTTACCTTCAGTGATTATGAGATGAACTGGGTCCGCCAGGTTCCAGGGAGGGGCCTGG  90
V  85.2% (213/250)  IGHV3-48*03  47   ........................C.........C.........AG......A...................C........A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  T  D  G  G  N  P  I  Y  A  D  S  V  R  G  R  F  T  M  S  R  D  N  A  
                    Query_5897   91   AGTGGCTCTCATACATTAGCACTGACGGTGGTAATCCGATTTATGCAGACTCTGTGAGGGGCCGATTCACCATGTCCAGAGACAACGCCC  180
V  85.2% (213/250)  IGHV3-48*03  137  .....G.T...........T.G.AGT...A...CCATATAC..C.............A...............C...............A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      Q  N  S  L  F  L  Q  M  D  S  L  R  A  D  D  T  G  V  Y  Y  C  V  R  D  T  P  G  H  R  N  
                    Query_5897   181  AGAACTCACTGTTCCTGCAAATGGACAGCCTGAGGGCCGACGACACGGGAGTTTATTACTGTGTGAGGGATACCCCTGGGCATCGTAACT  270
V  85.2% (213/250)  IGHV3-48*03  227  ............AT.........A..........A.....G.......CT.............C...A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD4-4*01   9    ------------------------------------------------------------------------------------......  14

                                      ------------->                                
                                      S  W  G  D  L  W  G  Q  G  I  L  V  T  V  S  S
                    Query_5897   271  CCTGGGGTGACCTCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTC  316
J  94.7% (36/38)    IGHJ5*02     12   --------....C..............C..................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_308963

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            324     8e-91
IGHD2-15*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGTC	GTGGTGGCAGCAGTTACT	ACAATA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGTCGTGGTGGCAGCAGTTACTACAATATTGACTAC	ARSRGGSSYYNIDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  A  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5898   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTTAGTGCCTATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (227/247)  IGHV3-7*01   47   ....................G.......................AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  N  E  K  H  Y  V  G  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5898   91   AATGGGTGGCCAACATAAAACAAGATGGAAATGAGAAACACTATGTGGGCTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.9% (227/247)  IGHV3-7*01   137  .G.................G..........G.......T.........A...............A....................CG...  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  D  T  L  Y  L  Q  M  D  S  L  T  T  E  D  T  A  V  Y  Y  C  A  R  S  R  G  G  S  S  Y  
                    Query_5898   181  AGGACACGTTGTATCTGCAAATGGACAGCCTGACAACTGAGGACACGGCTGTGTATTACTGTGCGAGGAGTCGTGGTGGCAGCAGTTACT  270
V  91.9% (227/247)  IGHV3-7*01   227  ..A..T.AC..............A.........G.G.C.............................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  83.3% (15/18)    IGHD2-15*01  12   ------------------------------------------------------------------------.......T...T.C....  29

                                      ------------->                                  
                                      Y  N  I  D  Y  W  G  Q  G  N  L  V  T  V  S  S  
                    Query_5898   271  ACAATATTGACTACTGGGGCCAGGGAAACCTGGTCACCGTCTCCTCAG  318
J  97.6% (41/42)    IGHJ4*02     7    ------.....................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_130668

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           344     6e-97
IGHD3-16*01                                                                                           12.2    33   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CGATGCCAATC	TGGGGG	GA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCAAAGACGATGCCAATCTGGGGGGATACTTCTACCATGGTATGGACGTC	TKDDANLGGYFYHGMDV	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	238	18	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  S  D  A  W  M  S  W  V  R  Q  V  P  G  K  G  L  
                    Query_5899   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCAGTTTCAGTGACGCCTGGATGAGCTGGGTCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  93.0% (238/256)  IGHV3-15*01  47   .......T.............C..............C.......A...........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  I  D  Y  A  A  A  L  K  G  R  F  T  I  S  R  D  
                    Query_5899   91   AGTGGGTAGGCCGCATTAAAAGCAAAACTGATGGTGGGACGATAGACTACGCTGCAGCCCTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  93.0% (238/256)  IGHV3-15*01  137  .......T.....T..........................A.C.............C..G..............................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  K  R  T  L  Y  M  Q  M  N  S  L  T  T  G  D  T  A  V  Y  Y  C  T  K  D  D  A  N  L  
                    Query_5899   181  ATTCAAAAAGGACGCTGTATATGCAAATGAACAGCCTGACAACCGGGGACACAGCCGTGTATTATTGTACCAAAGACGATGCCAATCTGG  270
V  93.0% (238/256)  IGHV3-15*01  227  .........AC.........C..................A.....A..................C.......C...--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (6/6)     IGHD3-16*01  17   ---------------------------------------------------------------------------------------...  19

                                      DR3-IMGT-------------------->                                 
                                      G  G  Y  F  Y  H  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5899   271  GGGGATACTTCTACCATGGTATGGACGTCTGGGGCCAAGGGACCACAGTCACCGTCTCCTCA  332
D  100.0% (6/6)     IGHD3-16*01  20   ...-----------------------------------------------------------  22
J  93.0% (53/57)    IGHJ6*02     6    -----....A....T.C.............................G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_130667

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            413     2e-117
IGHD5-18*01                                                                                           23.8    0.012 
IGHJ3*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD5-18*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GTTA	GTGGATACAACTATG	AA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTTAGTGGATACAACTATGAAGATGCTCTTGACATC	AVSGYNYEDALDI	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	275	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_5900   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATACACCTTCACCGGCTA  90
V  96.2% (275/286)  IGHV1-2*04   6    ..................G...............................................T.......................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  D  T  N  Y  A  Q
                    Query_5900   91   CTATATACACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGACACAAACTATGCACA  180
V  96.2% (275/286)  IGHV1-2*04   96   ......G...................................................................G...............  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  S  L  T  S  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  S  P  D  D  T  A
                    Query_5900   181  GAAGTTTCAGGGCTGGGTCTCCCTGACGAGCGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGTCCTGACGACACGGC  270
V  96.2% (275/286)  IGHV1-2*04   186  ...................A..A....C..G............................................AT.............  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  V  S  G  Y  N  Y  E  D  A  L  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_5900   271  CGTGTATTATTGTGCGGTTAGTGGATACAACTATGAAGATGCTCTTGACATCTGGGGCCAAGGGACAATGGTCATCGTCTCTTCAG  356
V  96.2% (275/286)  IGHV1-2*04   276  .........C......----------------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                       
D  93.3% (14/15)    IGHD5-18*01  1    --------------------.........G.....---------------------------------------------------  15
J  93.9% (46/49)    IGHJ3*02     2    -------------------------------------......T....T.........................C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_110354

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  S  G  K  G 
                    Query_5901   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACTCAGGGAAGGGC  90
V  97.2% (241/248)  IGHV4-31*03  49   ..................................C......C.............................C......C...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_5901   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.2% (241/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_5901   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.2% (241/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5901   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_164794

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	105	9	0	92.1
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	241	27	6	88


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_5902   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.0% (241/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_5902   91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.0% (241/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  P  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_5902   181  TCACCATCCCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.0% (241/274)  IGHV4-34*01  200  .......AT..................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_5902   271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.0% (241/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_130664

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           411     5e-117
IGHD3-3*01                                                                                            12.2    35    
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-3*01	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGCC	TTTCGGAGT	AGGAG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGCCTTTCGGAGTAGGAGTGCTTTTGATATC	ERRLSE*ECF*Y	282	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	281	114	108	4	2	94.7
CDR3-IMGT (germline)	282	289	8	8	0	0	100
Total	N/A	N/A	291	279	10	2	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  P  C  K  A  S  E  Y  I  F  T  S  Y
                    Query_5903   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTCCCTGCAAGGCATCTGAATACATCTTCACCAGCTA  90
V  95.9% (279/291)  IGHV1-46*01  6    ..................G....................................T...............G.....C............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  S  G  S  T  T  Y  A  Q
                    Query_5903   91   CTACATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTAGTGGTAGCACAACCTACGCACA  180
V  95.9% (279/291)  IGHV1-46*01  96   ...T...............................................................G............G.........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E    D  G 
                    Query_5903   181  GAAGTTTCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGG--ACGGC  268
V  95.9% (279/291)  IGHV1-46*01  186  ......C............................................................................AC.....  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                       P  L  L  L  C  E  R  R  L  S  E  *  E  C  F  *  Y  L  G  P  R  D  N  G  H  R  L  F   
                    Query_5903   269  CCTTTATTACTGTGCGAGAGACGCCTTTCGGAGTAGGAGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  354
V  95.9% (279/291)  IGHV1-46*01  276  .G.G.................-----------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                    
D  88.9% (8/9)      IGHD3-3*01   11   -------------------------...T.....----------------------------------------------------  19
J  100.0% (47/47)   IGHJ3*02     4    ---------------------------------------...............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_164792

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            343     2e-96
IGHJ6*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AGGAGACTTCTAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAAGGAGACTTCTATTACTACTACTACACTTTGGACGTC	AREGDFYYYYYTLDV	239	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	24	0	0	100
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	20	4	0	83.3
FR3-IMGT	125	238	114	112	2	0	98.2
CDR3-IMGT (germline)	239	246	8	7	1	0	87.5
Total	N/A	N/A	233	226	7	0	97


Alignments

                                     <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                      C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 
                    Query_5904  14   TGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATT  103
V  97.0% (226/233)  IGHV3-9*01  64   ..........................................................................................  153
                                      C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 

                                     -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                      S  W  D  S  D  T  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_5904  104  AGTTGGGACAGTGATACCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTG  193
V  97.0% (226/233)  IGHV3-9*01  154  ......A.T....G..G.........................................................................  243
                                      S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                     --------------------------------------------><-----------------CDR3-IMGT----------------->
                                      Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  R  E  G  D  F  Y  Y  Y  Y  Y  T  L  D  V 
                    Query_5904  194  CAAATGAATAGTCTGAGACCTGAGGACACGGCCTTGTATTACTGTGCAAGAGAAGGAGACTTCTATTACTACTACTACACTTTGGACGTC  283
V  97.0% (226/233)  IGHV3-9*01  244  ........C.........G..............................A...-------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                                        
J  94.7% (54/57)    IGHJ6*02    6    ------------------------------------------------------------------............GG.A........  29

                                                                      
                                      W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5904  284  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  316
J  94.7% (54/57)    IGHJ6*02    30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_130662

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            353     1e-99
IGHD2-21*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              58.4    1e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGACT	CATATTGTGGTGGT	ACCACCTGGTATCCCACAAAGCCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGACTCATATTGTGGTGGTACCACCTGGTATCCCACAAAGCCCGCTTGACTAT	ARDGTHIVVVPPGIPQSPLDY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  S  W  V  R  R  A  P  G  K  G  L  
                    Query_5905   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTTAGCACCTATTGGATGAGCTGGGTCCGCCGGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-7*01   47   ...............................A...........T.G.......................A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  L  D  G  S  V  K  D  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5905   91   AGTGGGTGGCCAACATAAATCTAGATGGAAGTGTGAAAGACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-7*01   137  ...................G.A...........A....T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      N  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  G  T  H  I  V  V  
                    Query_5905   181  ACAACTCACTGTATCTGCAAATGAACAGCCTCAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGAGATGGGACTCATATTGTGGTGG  270
V  95.2% (238/250)  IGHV3-7*01   227  .G.............................G....C...............G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD2-21*01  3    -----------------------------------------------------------------------------.............  15

                                      DR3-IMGT-------------------------->                                  
                                      V  P  P  G  I  P  Q  S  P  L  D  Y  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_5905   271  TACCACCTGGTATCCCACAAAGCCCGCTTGACTATTGGGGCCAGGGAGTTCTGGTCACCGTCTCCTCAG  339
D  100.0% (14/14)   IGHD2-21*01  16   .--------------------------------------------------------------------  16
J  90.5% (38/42)    IGHJ4*02     7    ---------------------------.......C............ACC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_130661

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           439     2e-125
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	73	1	0	98.6
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	113	1	0	99.1
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	287	6	0	98


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_5906   3    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCA  92
V  98.0% (287/293)  IGHV5-51*03  2    ..G...............................................................................C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  F  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_5906   93   ACTTCTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACA  182
V  98.0% (287/293)  IGHV5-51*03  92   G..A...................................................G............................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_5906   183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  98.0% (287/293)  IGHV5-51*03  182  ..........................................................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5906   273  CCGCCATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  98.0% (287/293)  IGHV5-51*03  272  .......................----------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    ------------------------......C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_130660

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           322     2e-90
IGHD1-1*01                                                                                            18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAG	TGGAACGAC	GGG	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGAGTGGAACGACGGGGACGAC	ARHEWNDGDD	246	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  D  S  I  S  N  N  L  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_5907   4    CCCTGAGACTCTCCTGCAGTGTCTCTGGAGACTCCATCAGCAATAATCTTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  91.2% (228/250)  IGHV4-39*01  50   .....TCC...A......C.........T.G...........G..G.AG.......................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  A  I  Y  Y  T  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_5907   94   TGGAGTGGATTGGAGCTATCTATTATACTGGAAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCA  183
V  91.2% (228/250)  IGHV4-39*01  140  .............GAG...........G...G.G........................................................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  K  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  E  W  N  D  G  D  
                    Query_5907   184  AGAACAAGTTCTCCCTGAAGCTGACCTCTGTCACCGCCGCAGACACGGCTGTGTACTACTGTGCGAGACATGAGTGGAACGACGGGGACG  273
V  91.2% (228/250)  IGHV4-39*01  230  .....C..................G......G.......................T..............--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD1-1*01   9    --------------------------------------------------------------------------.........-------  17
J  97.5% (39/40)    IGHJ4*02     9    --------------------------------------------------------------------------------------...T  12

                                      ->                                  
                                      D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5907   274  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.5% (39/40)    IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_98801

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           321     7e-90
IGHD3-16*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCTGCGGACTGG	GATTACG	GTT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCTGCGGACTGGGATTACGGTTACTGGTTTGACCAC	AKAADWDYGYWFDH	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5908   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCGCCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.5% (226/247)  IGHV3-23*01  47   ............................................AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  G  S  H  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5908   91   AGTGGGTCTCAGGTATTAGTGGTGGTTCTCATAATACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.5% (226/247)  IGHV3-23*01  137  ............C..........A..GG.GG..GC.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  L  R  M  N  N  L  R  A  E  D  A  A  L  Y  Y  C  A  K  A  A  D  W  D  Y  G  
                    Query_5908   181  AGAACACGCTCTCTCTGCGCATGAACAATCTCAGAGCCGAGGACGCGGCCCTATACTACTGTGCGAAGGCTGCGGACTGGGATTACGGTT  270
V  91.5% (226/247)  IGHV3-23*01  227  ..........G.A.....AA.......GC..G............A.....G....T...........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  8    --------------------------------------------------------------------------------.......---  14

                                      ------------->                                  
                                      Y  W  F  D  H  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_5908   271  ACTGGTTTGACCACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  93.8% (45/48)    IGHJ5*02     4    .......C....C..............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_104198

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           366     2e-103
IGHD5-18*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTGAGTGGACGAG	GCTATGG	CCCCCCAAAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTGAGTGGACGAGGCTATGGCCCCCCAAATTACTTTGACTAC	ARGLSGRGYGPPNYFDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	262	28	0	90.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  R  G  T  F  G  N  Y
                    Query_5909   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTAGAGGCACATTCGGCAACTA  90
V  90.3% (262/290)  IGHV1-69*01  6    ..................G...................................................G.......C...A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  N  W  L  R  Q  A  P  G  Q  G  L  E  W  M  G  E  I  I  P  V  F  A  T  S  N  Y  A  Q
                    Query_5909   91   TGCAATCAACTGGCTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGAGAAATCATCCCTGTCTTTGCAACATCAAATTACGCACA  180
V  90.3% (262/290)  IGHV1-69*01  96   ...T....G....G...................A...................GG.........A......GT...G....C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  L  T  A  D  E  S  T  N  L  A  Y  M  E  L  S  T  L  R  S  E  D  T  A
                    Query_5909   181  AAAGTTCCAGGGCAGAGTCACTCTCACCGCGGACGAATCCACGAACTTAGCCTACATGGAACTGAGTACCCTGAGATCTGAAGACACGGC  270
V  90.3% (262/290)  IGHV1-69*01  186  G....................GA.T...................G.AC............G.....C.G............G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  G  L  S  G  R  G  Y  G  P  P  N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_5909   271  CGTTTATTACTGTGCGAGAGGCCTGAGTGGACGAGGCTATGGCCCCCCAAATTACTTTGACTACTGGGGCCAGGGAACACTGGTCACCGT  360
V  90.3% (262/290)  IGHV1-69*01  276  ...G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD5-18*01  10   -----------------------------------.......------------------------------------------------  16
J  97.8% (45/46)    IGHJ4*02     3    ----------------------------------------------------..........................C...........  40

                                              
                                        S  S  
                    Query_5909   361  CTCCTCAG  368
J  97.8% (45/46)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_88978

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           374     9e-106
IGHD2-21*01                                                                                           10.3    138   
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-21*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTTAACCTT	CATAT	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTTAACCTTCATATAACTACGGTATGGACGCC	ARS*PSYNYGMDA	296	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	166	21	19	2	0	90.5
FR3-IMGT	167	295	129	106	8	15	82.2
CDR3-IMGT (germline)	296	301	6	6	0	0	100
Total	N/A	N/A	301	272	14	15	90.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  V  R  L  S  C  A  A  S  G  F  T  V  S  S  N
                    Query_5910   1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCGTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAA  90
V  90.4% (272/301)  IGHV3-53*01  6    ..........G...................................C...........................................  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  L  I  Y  S  G  P  S  T  Y  D  A  E  T
                    Query_5910   91   TTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCACTTATTTATAGCGGTCCTAGCACATACGACGCAGAGAC  180
V  90.4% (272/301)  IGHV3-53*01  96   C...................................................G..............GG........-------------  172
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T               

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                        H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  R  K  N  T  L  Y  L  Q  L  H  S  L  R  A
                    Query_5910   181  ACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAATCGCAAGAACACACTGTATCTTCAATTGCACAGTCTGAGAGC  270
V  90.4% (272/301)  IGHV3-53*01  173  --.............C..........................A......TC.........G............A..A....C........  260
                                        Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A

                                      ------------------------><--------------CDR3-IMGT-------------->                          
                                        E  D  T  A  V  Y  Y  C  A  R  S  *  P  S  Y  N  Y  G  M  D  A  W  G  Q  G  T  T  V  T  V
                    Query_5910   271  CGAGGACACGGCCGTGTATTACTGTGCGAGATCTTAACCTTCATATAACTACGGTATGGACGCCTGGGGCCAAGGGACCACGGTCACCGT  360
V  90.4% (272/301)  IGHV3-53*01  261  ...............................-----------------------------------------------------------  291
                                        E  D  T  A  V  Y  Y  C  A  R                                                            
D  100.0% (5/5)     IGHD2-21*01  3    -----------------------------------------.....--------------------------------------------  7
J  98.0% (49/50)    IGHJ6*02     13   -----------------------------------------------...............T...........................  55

                                             
                                        S  S 
                    Query_5910   361  CTCCTCA  367
J  98.0% (49/50)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_88979

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           277     1e-76
IGHD2-15*01                                                                                           21.8    0.045
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATAGGC	AGTGGTGGTGGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATAGGCAGTGGTGGTGGCTGCTACTTTGACAAC	ARRLGSGVPCTPFRIGSGGGCYFDN	244	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	213	36	0	85.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  P  G  D  S  I  S  S  D  S  F  Y  W  A  W  I  R  Q  S  P  V  K  G 
                    Query_5911   1    ACCCTGTCCCTCACCTGCACTGTTCCCGGTGATTCCATCAGCAGTGACAGTTTCTACTGGGCCTGGATCCGCCAGTCCCCAGTGAAGGGA  90
V  85.5% (213/249)  IGHV4-39*02  49   .......................CT.T....GC............AGT....A........G.............C......G......G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  M  F  N  G  G  R  T  Y  S  N  P  S  L  K  N  R  V  T  I  S  A  D  T  S 
                    Query_5911   91   CTGGAGTGGATAGGGACTATGTTTAATGGTGGACGCACCTATTCCAACCCGTCCCTCAAGAATCGAGTCACCATATCTGCGGACACGTCC  180
V  85.5% (213/249)  IGHV4-39*02  139  ...........T....G...C.A.T..A....GA.......C.A.................G...............C.TA.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       R  N  H  F  S  L  R  L  T  Y  V  T  S  A  D  S  G  V  Y  Y  C  A  R  R  L  G  S  G  V  P 
                    Query_5911   181  AGGAACCACTTCTCCCTGAGGCTGACCTATGTGACCTCCGCAGACAGCGGTGTCTATTACTGTGCGAGACGTCTTGGGTCCGGTGTCCCC  270
V  85.5% (213/249)  IGHV4-39*02  229  .A.................A.....G..C.......G.........CG.C...G...............---------------------  297
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      ------CDR3-IMGT-------------------------------->                                 
                                       C  T  P  F  R  I  G  S  G  G  G  C  Y  F  D  N  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_5911   271  TGTACTCCCTTCCGCATAGGCAGTGGTGGTGGCTGCTACTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  351
D  92.9% (13/14)    IGHD2-15*01  11   ---------------------.........A....----------------------------------------------  24
J  97.8% (45/46)    IGHJ4*02     2    -----------------------------------..........T...................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_304338

Length=430
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD3-9*01                                                                                            12.2    40    
IGHJ6*02                                                                                              108     1e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGACA	ACGGGCCCCA	ATTTCGATA	GCACTTCGGAACGCTGGGGCCGACGAAAGAAAATATC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACAACGGGCCCCAATTTCGATAGCACTTCGGAACGCTGGGGCCGACGAAAGAAAATATCACTACTACTACAACGGTATGGACGTC	AGQRAPISIALRNAGADERKYHYYYNGMDV	284	373	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  E  S  L  K  I  S  C  K  G  S  G  S  G  F  N  T  Y
                    Query_5912   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCCGGGGAGTCTCTGAAGATCTCCTGCAAGGGTTCTGGATCCGGCTTTAACACGTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ...............................A............................T.............A.A......C..GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  D  W  M  G  I  I  Y  V  D  D  S  D  T  T  Y  S  P
                    Query_5912   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGACTGGATGGGGATCATCTATGTTGATGACTCTGATACCACATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G.................................G..................CC..G..............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_5912   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------------------------CDR3-IMGT---------------------------
                                        M  Y  Y  C  A  G  Q  R  A  P  I  S  I  A  L  R  N  A  G  A  D  E  R  K  Y  H  Y  Y  Y  N
                    Query_5912   271  CATGTATTACTGTGCGGGACAACGGGCCCCAATTTCGATAGCACTTCGGAACGCTGGGGCCGACGAAAGAAAATATCACTACTACTACAA  360
V  95.2% (277/291)  IGHV5-51*01  276  ................A....---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  88.9% (8/9)      IGHD3-9*01   3    -------------------------------...A.....--------------------------------------------------  11
J  98.3% (58/59)    IGHJ6*02     4    -----------------------------------------------------------------------------...........T.  16

                                      ------------>                                 
                                        G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5912   361  CGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  406
J  98.3% (58/59)    IGHJ6*02     17   ..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 42287184


Query= Query_83315

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHD3-16*01                                                                                           21.8    0.039
IGHJ2*01                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCT	GGGAGTTATGC	CGAT	TTCAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTGGGAGTTATGCCGATTTCAATATC	AAGSYADFNI	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  R  S  Y  D  M  I  W  V  R  Q  A  P  G  K  G  L  
                    Query_5913   1    GGTCCCTGAGACTCTCCTGTGCAGTTTCCGGATTCACCTTTAGAAGCTATGACATGATTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (229/245)  IGHV3-23*01  47   ........................CC..T..............C.......C.....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  A  S  A  I  S  G  N  G  G  S  S  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5913   91   AGTGGGCCTCAGCTATTAGTGGAAATGGTGGTAGTTCATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.5% (229/245)  IGHV3-23*01  137  ......T...............T.G.........CA......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  I  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  A  G  S  Y  A  D  F  N  
                    Query_5913   181  AGAACATTCTGTATTTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTATATTACTGTGCGGCTGGGAGTTATGCCGATTTCAATA  270
V  93.5% (229/245)  IGHV3-23*01  227  ......CG......C.....................C............................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD3-16*01  20   --------------------------------------------------------------------...........-----------  30
J  88.4% (38/43)    IGHJ2*01     11   -----------------------------------------------------------------------------------...G..C  17

                                      ->                                  
                                      I  W  G  R  G  T  L  V  T  V  S  S  
                    Query_5913   271  TCTGGGGCCGGGGCACGTTGGTCACTGTCTCCTCAG  306
J  88.4% (38/43)    IGHJ2*01     18   ..........T.....CC..................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_88973

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         366     2e-103
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*01                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCATCCCTTAAGGTCATTCGCGTC	CAGTGGCTGG	GCGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCATCCCTTAAGGTCATTCGCGTCCAGTGGCTGGGCGTCA	ASHPLRSFASSGWAS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	261	27	0	90.6


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  T  F  T  N  *
                    Query_5914     1    GCAGCTGGTGCAGTCTGGAGGAGAGGTGAAGAAGCCCGGGGAGTCTTTGAGGATTTCCTGTAAGGCTTCTGGATACACCTTTACCAACTA  90
V  90.6% (261/288)  IGHV5-10-1*01  6    ....................C.........A...............C.......C..........G...........G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  V  P  G  K  G  M  E  W  M  G  R  I  D  P  S  D  S  Y  T  S  Y  S  P
                    Query_5914     91   ATGGATCAGCTGGGTGCGTCAGGTGCCCGGGAAAGGCATGGAGTGGATGGGGAGGATTGACCCTAGTGACTCTTATACCAGCTACAGTCC  180
V  90.6% (261/288)  IGHV5-10-1*01  96   C.................C...A..............C......................T...................A......C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  D  G  N  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  R  W  S  S  L  M  A  S  N  S  A
                    Query_5914     181  GTCCTTCGACGGCAACGTCACCATCTCAGTTGACAAGTCCATCAGTACTGCCTATTTGCGGTGGAGCAGCCTGATGGCCTCTAACTCCGC  270
V  90.6% (261/288)  IGHV5-10-1*01  186  .......C.A...C...............C...............C........CC...A..............A......GG..A....  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          M  Y  Y  C  A  S  H  P  L  R  S  F  A  S  S  G  W  A  S  W  G  H  G  T  L  V  T  V  S  S
                    Query_5914     271  CATGTATTATTGTGCGAGCCATCCCTTAAGGTCATTCGCGTCCAGTGGCTGGGCGTCATGGGGCCACGGAACCCTGGTCACCGTCTCCTC  360
V  90.6% (261/288)  IGHV5-10-1*01  276  .........C........------------------------------------------------------------------------  293
                                          M  Y  Y  C  A                                                                           
D  100.0% (10/10)   IGHD6-19*01    9    ------------------------------------------..........--------------------------------------  18
J  97.1% (33/34)    IGHJ4*01       15   ----------------------------------------------------------........A.......................  46

                                          
                                          
                    Query_5914     361  AG  362
J  97.1% (33/34)    IGHJ4*01       47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_88970

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD2-2*02                                                                                            14.1    8.3  
IGHJ3*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGGGCCCTAGAAG	GCTATAC	AGAG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGCCCTAGAAGGCTATACAGAGGCTTTTGATATC	ARGGALEGYTEAFDI	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  N  Y  Y  W  S  W  M  R  Q  P  P  G  K  G  L  E  
                    Query_5915   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAATAATTACTACTGGAGCTGGATGCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  90.9% (221/243)  IGHV4-59*01  50   .....TCC...A....C......................G..G..................C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  C  F  Y  Y  G  G  N  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  G  T  S  K  N  
                    Query_5915   94   GGATTGGGTGTTTCTATTACGGTGGAAACACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTGGGCACGTCCAAGAACC  183
V  90.9% (221/243)  IGHV4-59*01  140  .........A.A........A....G.G....A..................................A.....A.A..............  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  N  S  L  T  S  A  D  T  A  V  Y  Y  C  A  R  G  G  A  L  E  G  Y  T  E  
                    Query_5915   184  AGTTCTCCCTGAAGCTGAACTCTCTGACGTCTGCGGACACGGCCGTATATTACTGTGCGAGAGGGGGGGCCCTAGAAGGCTATACAGAGG  273
V  90.9% (221/243)  IGHV4-59*01  230  ..................G....G....CG................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (7/7)     IGHD2-2*02   24   ------------------------------------------------------------------------------.......-----  30
J  95.7% (44/46)    IGHJ3*02     5    -----------------------------------------------------------------------------------------.  5

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  A  V  T  V  S  S  
                    Query_5915   274  CTTTTGATATCTGGGGCCAAGGGACAGCGGTCACCGTCTCTTCAG  318
J  95.7% (44/46)    IGHJ3*02     6    ..........................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_342688

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           375     3e-106
IGHD6-13*01                                                                                           18.0    0.62  
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCTCGTTACCCGGA	TATAGCAGTAGGTGG	AACGAACCTTCCTTCTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCTCGTTACCCGGATATAGCAGTAGGTGGAACGAACCTTCCTTCTCCTACGGTATGGCCGTC	ATSLPGYSSRWNEPSFSYGMAV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	243	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_5916   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (243/246)  IGHV3-11*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  V  I  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5916   91   AGTGGGTTTCATACATTAGTAGTAGTGGTAGTGTCATATACTACGCAGACTCTCTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  98.8% (243/246)  IGHV3-11*01  137  ................................AC...................G....................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  S  L  P  G  Y  S  S  
                    Query_5916   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGACCTCGTTACCCGGATATAGCAGTA  270
V  98.8% (243/246)  IGHV3-11*01  227  ..................................................................------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  86.7% (13/15)    IGHD6-13*01  4    --------------------------------------------------------------------------------........C.  13

                                      -CDR3-IMGT--------------------------->                                 
                                      R  W  N  E  P  S  F  S  Y  G  M  A  V  W  G  Q  G  T  S  V  T  L  S  S 
                    Query_5916   271  GGTGGAACGAACCTTCCTTCTCCTACGGTATGGCCGTCTGGGGCCAAGGGACCTCGGTCACCCTCTCCTCA  341
D  86.7% (13/15)    IGHD6-13*01  14   .C...------------------------------------------------------------------  18
J  93.9% (46/49)    IGHJ6*02     14   ----------------------...........A...................A........G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_54393

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           433     1e-123
IGHD3-10*01                                                                                           12.2    37    
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTCAATT	TGGTTC	CGCAAATGG	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTCAATTTGGTTCCGCAAATGGCTACCAGTACGGCATGGACGTC	ARFQFGSANGYQYGMDV	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	113	1	0	99.1
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	285	8	0	97.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  P  
                    Query_5917   3    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTAAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTCCCC  92
V  97.3% (285/293)  IGHV5-51*03  2    ....G...............................................G.................................A..A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      H  Y  W  I  G  *  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  
                    Query_5917   93   ACTACTGGATCGGCTGAGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACA  182
V  97.3% (285/293)  IGHV5-51*03  92   G...............G....................................................G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_5917   183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  97.3% (285/293)  IGHV5-51*03  182  ................................................G.........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  M  Y  Y  C  A  R  F  Q  F  G  S  A  N  G  Y  Q  Y  G  M  D  V  W  G  Q  G  T  T  V  
                    Query_5917   273  CCGCCATGTATTACTGTGCGAGATTTCAATTTGGTTCCGCAAATGGCTACCAGTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCA  362
V  97.3% (285/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD3-10*01  10   -------------------------------......-----------------------------------------------------  15
J  94.5% (52/55)    IGHJ6*02     8    ----------------------------------------------....T.C.....T...............................  51

                                                 
                                      T  V  S  S 
                    Query_5917   363  CCGTCTCCTCA  373
J  94.5% (52/55)    IGHJ6*02     52   ...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_80713

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-72*01                                                                                           366     2e-103
IGHD2-2*02                                                                                            19.9    0.16  
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-72*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTAGA	CAGTCGG	AGTACCAGGTGATATA	TTCCCT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGACAGTCGGAGTACCAGGTGATATATTCCCTCTACGGAATGGACGTC	ARQSEYQVIYSLYGMDV	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	254	6	6	0	0	100
Total	N/A	N/A	254	244	10	0	96.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_5918   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTGACCACTACATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.1% (244/254)  IGHV3-72*01  47   ....................................C.....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  S  R  N  K  V  N  R  Y  T  T  E  F  A  A  S  V  K  G  R  F  S  I  S  R  D  
                    Query_5918   91   AGTGGGTTGGCCGTAGTAGAAATAAAGTTAACAGGTACACCACAGAATTCGCCGCGTCTGTGAAAGGCAGATTCAGCATCTCAAGAGATC  180
V  96.1% (244/254)  IGHV3-72*01  137  ...............C......C....C......T.............A..........................C.............G  226
                                      E  W  V  G  R  T  R  N  K  A  N  S  Y  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      H  S  K  N  S  L  V  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  Q  S  E  Y  Q  
                    Query_5918   181  ATTCAAAGAACTCACTGGTTCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTGCTAGACAGTCGGAGTACCAGG  270
V  96.1% (244/254)  IGHV3-72*01  227  .................TA.......................................................----------------  300
                                      D  S  K  N  S  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R                 
D  87.5% (14/16)    IGHD2-2*02   14   ---------------------------------------------------------------------------------........C  22

                                      DR3-IMGT-------------------->                                 
                                      V  I  Y  S  L  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5918   271  TGATATATTCCCTCTACGGAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTGTCCTCA  332
D  87.5% (14/16)    IGHD2-2*02   23   ..C....-------------------------------------------------------  29
J  95.9% (47/49)    IGHJ6*02     14   -------------......T...................................C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_54391

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           416     2e-118
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	CCGCCTTCCCTAGCGACGCCGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGCCTTCCCTAGCGACGCCGGGTACTTTGGCTGC	ARAAFPSDAGYFGC	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  D  T  L  T  R  Y
                    Query_5919   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGAGACACCCTCACCAGGTA  90
V  95.9% (278/290)  IGHV1-46*01  6    ..................G......................................................T.....T.......C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  S  G  A  T  K  Y  A  Q
                    Query_5919   91   CTTTATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTAGTGGAGCCACAAAATACGCACA  180
V  95.9% (278/290)  IGHV1-46*01  96   ..A................................................................G....TAG.....GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  I  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_5919   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAATCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.9% (278/290)  IGHV1-46*01  186  .................................................G........................................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  A  A  F  P  S  D  A  G  Y  F  G  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5919   271  CGTGTATTACTGTGCGAGAGCCGCCTTCCCTAGCGACGCCGGGTACTTTGGCTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  95.9% (278/290)  IGHV1-46*01  276  ....................---------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                       
J  95.7% (44/46)    IGHJ4*02     3    -------------------------------------------.......A..A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_54390

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           324     8e-91
IGHD6-19*01                                                                                           18.0    0.60 
IGHJ2*01                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAA	CAGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAACAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQQWLPGDWYFDL	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  R  N  Y  W  S  W  I  R  Q  P  P  G  E  R  L  E 
                    Query_5920   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCACTAGAAACTACTGGAGCTGGATCCGGCAGCCCCCAGGTGAGAGACTGGAG  90
V  92.6% (225/243)  IGHV4-59*08  49   ...................C...........G........G...TT...............................GA..G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_5920   91   TGGATTGCATATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  92.6% (225/243)  IGHV4-59*08  139  .......GG......T...........AG...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  F  L  P  A  V  Q  Q  W  L 
                    Query_5920   181  CAGTTCTCCCTGAAGATGACTTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGATTCCTCCCCGCGGTGCAACAGTGGCTG  270
V  92.6% (225/243)  IGHV4-59*08  229  ...............C...GC........................G.................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-19*01  9    ---------------------------------------------------------------------------------.........  17

                                      ----------------------->                                  
                                       P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_5920   271  CCAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  328
J  100.0% (51/51)   IGHJ2*01     3    -------...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_80717

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           324     8e-91
IGHD6-13*01                                                                                           27.6    8e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GAAAGGGTCCGTT	TAGCAGCAGCTGGT	GGAAACTACGGGGGGGGGGGAGAG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAAGGGTCCGTTTAGCAGCAGCTGGTGGAAACTACGGGGGGGGGGGAGAGACGGTATGGACGTC	ARKGPFSSSWWKLRGGGRDGMDV	240	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	10	2	0	83.3
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	125	24	21	3	0	87.5
FR3-IMGT	126	239	114	113	1	0	99.1
CDR3-IMGT (germline)	240	243	4	4	0	0	100
Total	N/A	N/A	229	218	11	0	95.2


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  A  G  M  T  F  S  S  Y  A  M  I  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 
                    Query_5921   15   TGTGCAGCCGCAGGAATGACCTTTAGCAGTTATGCCATGATCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGGTATT  104
V  95.2% (218/229)  IGHV3-23*01  64   .........T.T...T.C...........C..........G............................................C....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       G  G  S  G  G  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_5921   105  GGTGGGAGTGGTGGTGGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTG  194
V  95.2% (218/229)  IGHV3-23*01  154  A....T.........A..........................................................................  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------------------CDR3-IMGT------
                                       Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  K  G  P  F  S  S  S  W  W  K  L  R  G 
                    Query_5921   195  CAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTATATTACTGTGCGAGAAAGGGTCCGTTTAGCAGCAGCTGGTGGAAACTACGGGGG  284
V  95.2% (218/229)  IGHV3-23*01  244  ...................C.............................-----------------------------------------  292
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  100.0% (14/14)   IGHD6-13*01  6    --------------------------------------------------------------..............--------------  19

                                      ----------------------->                                 
                                       G  G  R  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5921   285  GGGGGGAGAGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
J  100.0% (47/47)   IGHJ6*02     16   ----------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_54395

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           410     1e-116
IGHD1-1*01                                                                                            10.3    133   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAACG	GGTAACCCCATATCGCGGC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTAT	ARGTGNPISRLGY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_5922   1    GCAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTA  90
V  95.2% (276/290)  IGHV1-46*01  6    ..................G.C.....................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  I  I  N  P  S  A  G  S  T  N  Y  A  Q
                    Query_5922   91   CTATGTGCACTGGGTACGACAGGCCCCTGGACAAGGGCTTGAGTGGTTGGGAATAATCAACCCTAGTGCTGGTAGCACAAATTACGCACA  180
V  95.2% (276/290)  IGHV1-46*01  96   ....A..........G..............................A.....................G...........GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  L  D  L  S  S  L  K  S  D  D  T  A
                    Query_5922   181  GAAATTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACTTGGACCTGAGCAGCCTTAAATCTGACGACACGGC  270
V  95.2% (276/290)  IGHV1-46*01  186  ...G...................................................A....G...........G.G......G........  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  G  T  G  N  P  I  S  R  L  G  Y  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_5922   271  CGTGTATTACTGTGCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  356
V  95.2% (276/290)  IGHV1-46*01  276  ....................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (5/5)     IGHD1-1*01   11   --------------------.....-------------------------------------------------------------  15
J  92.9% (39/42)    IGHJ4*02     7    --------------------------------------------...A...C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_80715

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           318     6e-89
IGHD3-16*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_5923   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  90.8% (226/249)  IGHV4-61*01  49   .......................C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  F  K  S  R  M  S  M  S  V  D  T  S 
                    Query_5923   91   CTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCTTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  90.8% (226/249)  IGHV4-61*01  139  ....A.........GT............G......CAC..A.............C...........G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y 
                    Query_5923   181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTAT  270
V  90.8% (226/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------------.....  28

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_5923   271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
D  100.0% (7/7)     IGHD3-16*02  29   ..--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_169012

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           439     2e-125
IGHD3-16*01                                                                                           12.2    36    
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTTGAGG	GATTAC	CAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTAC	ARSLRDYQPFYFDY	290	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	73	1	0	98.6
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	112	2	0	98.2
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	287	6	0	98


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  R  Y  T  F  T  
                    Query_5924   3    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTAGATACACCTTTACCA  92
V  98.0% (287/293)  IGHV5-51*03  2    ....G.....................................................................G......G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_5924   93   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  182
V  98.0% (287/293)  IGHV5-51*03  92   G.........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_5924   183  GCCCGTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  98.0% (287/293)  IGHV5-51*03  182  ..........................A...............................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  A  R  S  L  R  D  Y  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  
                    Query_5924   273  CTGCCATGTATTACTGTGCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCT  362
V  98.0% (287/293)  IGHV5-51*03  272  .C.....................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD3-16*01  8    --------------------------------......----------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ----------------------------------------------....................A.......................  45

                                         
                                      S  
                    Query_5924   363  CAG  365
J  97.9% (46/47)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_169013

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           248     8e-68
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	ARGLLIEDPNYVWGSFRRNHNCYTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	92	22	0	80.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	201	43	0	82.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  R  L  E 
                    Query_5925   1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGAGACTGGAG  90
V  82.4% (201/244)  IGHV4-59*01  49   ..................A....C.......G.......A...G..........AG....A.C........C.......A.G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_5925   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  82.4% (201/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  N  Y 
                    Query_5925   181  CAGTTGTCTCTCAACCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCAACTAT  270
V  82.4% (201/244)  IGHV4-59*01  229  .....C..C..G..G....G.TCT.....................GT.....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_5925   271  GTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  94.7% (36/38)    IGHJ3*01     13   --------------------------------------...................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_54399

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            372     2e-105
IGHD2-15*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TACTGG	ATTGTAGTGGTGCTATCTGCTACT	TCCTGGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAAAGATATACTGGATTGTAGTGGTGCTATCTGCTACTTCCTGGCTTTTGACTCC	TKDILDCSGAICYFLAFDS	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	252	10	9	1	0	90
Total	N/A	N/A	252	245	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5926   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  97.2% (245/252)  IGHV3-9*01   47   .....................................C....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  D  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5926   91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGACAGTATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (245/252)  IGHV3-9*01   137  ..............................GT..C.......................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  F  Y  Y  C  T  K  D  I  L  D  C  S  G  
                    Query_5926   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGTTGAGGACACGGCCTTCTATTACTGTACAAAAGATATACTGGATTGTAGTGGTG  270
V  97.2% (245/252)  IGHV3-9*01   227  ....................................C...............G.........G.........------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  91.7% (22/24)    IGHD2-15*01  6    ------------------------------------------------------------------------------............  17

                                      -IMGT----------------------->                                  
                                      A  I  C  Y  F  L  A  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5926   271  CTATCTGCTACTTCCTGGCTTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  91.7% (22/24)    IGHD2-15*01  18   G..G........---------------------------------------------------  29
J  97.7% (42/43)    IGHJ4*02     6    --------------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_54398

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           311     4e-87
IGHD2-21*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCGC	CATATTG	AGGCTCGGGAGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGCCATATTGAGGCTCGGGAGCTTGACCAC	ARRHIEARELDH	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	223	24	0	90.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5927   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.3% (223/247)  IGHV3-30*03  47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  V  V  S  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  P  
                    Query_5927   91   AGTGGGTGGCAGTTGTTGTGTCTGACGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATTTCCAGAGACACGCCGA  180
V  90.3% (223/247)  IGHV3-30*03  137  ..............A.ATCA.A...T.....T...........T.............................C..........ATT.C.  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  S  T  L  Y  L  Q  M  R  S  P  R  P  E  D  T  A  V  Y  Y  C  A  R  R  H  I  E  A  R  E  
                    Query_5927   181  AGAGCACTCTTTATCTGCAGATGAGGAGCCCGAGACCTGAGGACACGGCTGTATATTACTGTGCGAGGCGCCATATTGAGGCTCGGGAGC  270
V  90.3% (223/247)  IGHV3-30*03  227  ...A...G..G........A....AC....T....G................G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-21*01  3    -----------------------------------------------------------------------.......------------  9

                                      ------->                                  
                                      L  D  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_5927   271  TTGACCACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  312
J  95.2% (40/42)    IGHJ4*02     7    .....T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_169014

Length=407
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           416     2e-118
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCGTCCTGTAAAATATGGC	ACTATGAAAGTATTGGTTA	CTGTGGGTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCGTCCTGTAAAATATGGCACTATGAAAGTATTGGTTACTGTGGGTTCTTTGACTAC	ARDPSCKIWHYESIGYCGFFDY	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  S  F  T  S  N 
                    Query_5928   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTACCAGCAAC  91
V  95.9% (278/290)  IGHV1-18*04  7    .................................................A..........................C..........T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  T  Y  N  D  N  T  K  Y  V  P 
                    Query_5928   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGATGGATCAGCACTTACAATGATAACACAAAATATGTACCG  181
V  95.9% (278/290)  IGHV1-18*04  97   .....................................T......................G.........G.........C....C..A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  S  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_5928   182  AAGCTCCAGGGCAGAGTCACCATGACCTCAGACACATCCACGAGCACAGCCTACATGGAACTGAGGAGCCTGAGATCTGACGATACGGCC  271
V  95.9% (278/290)  IGHV1-18*04  187  ...........................A...............................G.......................C......  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------------CDR3-IMGT--------------------------->            
                                       V  Y  Y  C  A  R  D  P  S  C  K  I  W  H  Y  E  S  I  G  Y  C  G  F  F  D  Y  W  G  Q  G 
                    Query_5928   272  GTGTATTACTGTGCGAGAGACCCGTCCTGTAAAATATGGCACTATGAAAGTATTGGTTACTGTGGGTTCTTTGACTACTGGGGCCAGGGA  361
V  95.9% (278/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  89.5% (17/19)    IGHD3-22*01  6    ----------------------------------------.......T....G......-------------------------------  24
J  100.0% (44/44)   IGHJ4*02     5    --------------------------------------------------------------------......................  26

                                                            
                                       T  L  V  T  V  S  S  
                    Query_5928   362  ACCCTGGTCACCGTCTCCTCAG  383
J  100.0% (44/44)   IGHJ4*02     27   ......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39867768


Query= Query_221458

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-9*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCGGTT	GTATTACGATATCTTG	CGGCGGGGAGG	CTACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGTTGTATTACGATATCTTGCGGCGGGGAGGCTACAACGGTTTGGACGTC	ARGRLYYDILRRGGYNGLDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  V  G  S  F  S  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5929   1    ACCCTGTCCCTCACCTGCGCTGTCTATGTTGGGTCCTTCAGTGATTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (233/245)  IGHV4-34*01  49   ............................G..............G..............................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  N  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5929   91   TGGATTGGCGAAATCAATCATAGTGGATCCAACAGCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  ........G..................AG..C..A.......................................A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  D  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  L  Y  Y  D  I  L  R 
                    Query_5929   181  CAGTTCTCCCTGAAGCTGGACTCCGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCCGGTTGTATTACGATATCTTGCGG  270
V  95.1% (233/245)  IGHV4-34*01  229  ..................AG...T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  93.8% (15/16)    IGHD3-9*01   1    -----------------------------------------------------------------------............T...---  16

                                      GT------------------------>                                 
                                       R  G  G  Y  N  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5929   271  CGGGGAGGCTACAACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
J  96.2% (50/52)    IGHJ6*02     11   --------....T.....A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_335119

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           427     9e-122
IGHD1-26*01                                                                                           21.8    0.044 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGG	GTGGGAGCTAC	GAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGTGGGAGCTACGAAACTTTGACTAC	ARGGWELRNFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_5930   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  97.2% (281/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  M  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  A  G  D  S  D  T  R  Y  S  P
                    Query_5930   91   CTGGATCGGCTGGATGCGCCAGATGCCCGGGAAAGGCCTCGAGTGGATGGGGATCATCTATGCGGGTGACTCTGATACCAGATACAGCCC  180
V  97.2% (281/289)  IGHV5-51*03  96   .............G.........................G.....................C.T..........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  F  L  Q  W  S  S  L  K  A  S  D  S  A
                    Query_5930   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACTCCGC  270
V  97.2% (281/289)  IGHV5-51*03  186  ............................................G........A...............................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  G  G  W  E  L  R  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5930   271  CATGTATTACTGTGCGAGAGGGGGGTGGGAGCTACGAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  97.2% (281/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (11/11)   IGHD1-26*01  7    ------------------------...........------------------------------------------------  17
J  100.0% (45/45)   IGHJ4*02     4    --------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_166266

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            369     2e-104
IGHD3-22*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TAGAGAGGTCCGCATTGA	TAGTGCTTATTAC	GAGGGACCTCC	TGACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAGAGAGGTCCGCATTGATAGTGCTTATTACGAGGGACCTCCTGACAAC	ASREVRIDSAYYEGPPDN	264	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	77	27	23	4	0	85.2
FR2-IMGT	78	128	51	49	2	0	96.1
CDR2-IMGT	129	149	21	20	1	0	95.2
FR3-IMGT	150	263	114	107	7	0	93.9
CDR3-IMGT (germline)	264	268	5	5	0	0	100
Total	N/A	N/A	268	252	16	0	94


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  D  H  W  W  T  W  V  
                    Query_5931   1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTGATCACTGGTGGACTTGGGTCC  90
V  94.0% (252/268)  IGHV4-4*02   26   ................T........................G............G.............AG.A.........G........  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  T  G  S  T  N  Y  N  P  S  L  G  G  R  V  
                    Query_5931   91   GCCAGCCCCCAGGGAAGGGGCTGGAGTGGATAGGGGAAATCTATCATACTGGGAGCACCAACTACAACCCGTCCCTCGGGGGTCGAGTCT  180
V  94.0% (252/268)  IGHV4-4*02   116  ...............................T................G............................AA.A........A  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      S  I  S  V  D  K  S  K  N  Q  F  S  L  I  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  
                    Query_5931   181  CCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGATACTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGTA  270
V  94.0% (252/268)  IGHV4-4*02   206  .......................................AG.....C.........................................--  293
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A     

                                      ----------------CDR3-IMGT--------------------->                                  
                                      R  E  V  R  I  D  S  A  Y  Y  E  G  P  P  D  N  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_5931   271  GAGAGGTCCGCATTGATAGTGCTTATTACGAGGGACCTCCTGACAACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  351
D  92.3% (12/13)    IGHD3-22*01  16   ----------------.....G.......----------------------------------------------------  28
J  95.1% (39/41)    IGHJ4*02     8    ----------------------------------------....T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_235911

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           313     1e-87
IGHD1-26*01                                                                                           14.1    8.4  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCCA	AAACCAGAAGG	GGGAGCT	TCGAG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAACCAGAAGGGGGAGCTTCGAGATGGACGTC	AKTRRGSFEMDV	249	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	102	12	0	89.5
CDR3-IMGT (germline)	249	252	4	3	1	0	75
Total	N/A	N/A	252	226	26	0	89.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  S  F  T  F  S  D  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5932   1    GGTCCCTGAGACTCTCCTGTACAGCCTCCTCGTTCACTTTCAGTGACGCCTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.7% (226/252)  IGHV3-15*01  47   .......T............G.......TGGA............A.............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  V  D  G  G  T  T  D  Y  A  A  P  V  E  G  R  L  T  I  S  R  D  
                    Query_5932   91   AATGGGTGGGCCGTATTAAAAGTAAAGTTGATGGTGGGACAACAGACTATGCTGCACCCGTGGAAGGCAGATTAACCATCTCAAGAGATG  180
V  89.7% (226/252)  IGHV3-15*01  137  .G.....T..............C...AC.....................C............A..........C................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------CDR3-IMG
                                      D  S  K  N  T  V  Y  L  Q  V  R  N  L  K  T  E  D  T  A  V  Y  Y  C  A  K  T  R  R  G  S  
                    Query_5932   181  ATTCGAAAAACACGGTGTATCTACAAGTGAGAAACCTGAAGACCGAGGACACAGCCGTCTATTACTGTGCCAAAACCAGAAGGGGGAGCT  270
V  89.7% (226/252)  IGHV3-15*01  227  ....A.........C.......G...A...AC.G......A.................G.........A...------------------  298
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (7/7)     IGHD1-26*01  9    -----------------------------------------------------------------------------------.......  15

                                      T------------>                                 
                                      F  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5932   271  TCGAGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  100.0% (42/42)   IGHJ6*02     21   -----..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_335112

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            344     6e-97
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ6*02                                                                                              102     4e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	230	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	23	1	0	95.8
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	24	0	0	100
FR3-IMGT	116	229	114	113	1	0	99.1
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	222	2	0	99.1


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  K  Q  D 
                    Query_5933   14   TCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCAAGAT  103
V  99.1% (222/224)  IGHV3-7*01   73   .................T........................................................................  162
                                       S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  K  Q  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 
                    Query_5933   104  GGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAAC  193
V  99.1% (222/224)  IGHV3-7*01   163  ........................................T.................................................  252
                                       G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><-----------------------CDR3-IMGT---------------------
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  I  D  Y  Y  Y  Y  G  M  D 
                    Query_5933   194  AGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGAC  283
V  99.1% (222/224)  IGHV3-7*01   253  ............................................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  100.0% (10/10)   IGHD3-22*01  17   --------------------------------------------------------..........------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    -------------------------------------------------------------------.......C..C............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5933   284  GTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  319
J  96.6% (57/59)    IGHJ6*02     27   ....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_335113

Length=413
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-24*01                                                                                           422     3e-120
IGHD2-2*02                                                                                            27.6    0.001 
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-24*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAACA	TCTACCCCGGACACTGG	AGTACTACCAGGTGCTATAC	ACGACC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACATCTACCCCGGACACTGGAGTACTACCAGGTGCTATACACGACCACTACTACCACAGTATGGACGTC	ATSTPDTGVLPGAIHDHYYHSMDV	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	279	9	0	96.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T  E  L 
                    Query_5934   2    CAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTA  91
V  96.9% (279/288)  IGHV1-24*01  7    ........A.................................................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T  E  L 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  V  Y  A  Q 
                    Query_5934   92   TCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAGGATGGTGAAACAGTTTATGCCCAG  181
V  96.9% (279/288)  IGHV1-24*01  97   .................................................................A............A.C..C..A...  186
                                       S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  I  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  E  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  G  D  T  A 
                    Query_5934   182  AAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTATATGGAGCTGAGCAGCCTGAGATCTGGGGACACGGCC  271
V  96.9% (279/288)  IGHV1-24*01  187  .....................................................C.........................A..........  276
                                       K  F  Q  G  R  V  T  M  T  E  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><-------------------------------CDR3-IMGT------------------------------>      
                                       V  Y  Y  C  A  T  S  T  P  D  T  G  V  L  P  G  A  I  H  D  H  Y  Y  H  S  M  D  V  W  G 
                    Query_5934   272  GTCTATTACTGTGCAACATCTACCCCGGACACTGGAGTACTACCAGGTGCTATACACGACCACTACTACCACAGTATGGACGTCTGGGGC  361
V  96.9% (279/288)  IGHV1-24*01  277  ..G...............------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  T                                                                         
D  90.0% (18/20)    IGHD2-2*02   11   -----------------------------------....G......C........-----------------------------------  30
J  92.9% (52/56)    IGHJ6*02     7    -------------------------------------------------------------........T..G.................  35

                                                                 
                                       Q  G  T  T  V  T  V  S  S 
                    Query_5934   362  CAGGGAACCACGGTCACCGTCTCCTCA  388
J  92.9% (52/56)    IGHJ6*02     36   ..A..G.....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40498920


Query= Query_335114

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           311     4e-87
IGHD3-3*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCACGACTCC	TTACGAT	GACCCACGGAAGGCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCACGACTCCTTACGATGACCCACGGAAGGCATACTTTGACTAC	ARVTTPYDDPRKAYFDY	239	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	49	2	0	96.1
CDR2-IMGT	101	124	24	21	3	0	87.5
FR3-IMGT	125	238	114	105	9	0	92.1
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	231	215	16	0	93.1


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  A  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  F  I  
                    Query_5935   15   GTGCAGCCTCTGGATTCACCTTCAGTGCCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCCTTTATCC  104
V  93.1% (215/231)  IGHV3-30*03  65   ..........................AG......................................................AG....AT  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      P  Y  D  G  S  N  E  Y  Y  A  D  S  V  R  G  R  V  S  I  S  R  D  N  S  G  N  T  L  Y  L  
                    Query_5935   105  CATATGATGGAAGTAATGAATACTATGCAGACTCCGTGAGGGGCCGAGTCTCCATCTCCAGAGACAATTCCGGGAACACACTGTATCTGC  194
V  93.1% (215/231)  IGHV3-30*03  155  .................A.....................A.......T..A....................AA......G..........  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------------CDR3-IMGT----------------
                                      H  M  H  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  T  T  P  Y  D  D  P  R  K  A  Y  F  
                    Query_5935   195  ATATGCACAGCCTGAGAGCTGAGGACACGGCTTTGTATTACTGTGCGAGAGTCACGACTCCTTACGATGACCCACGGAAGGCATACTTTG  284
V  93.1% (215/231)  IGHV3-30*03  245  .A...A..........................G..................---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (7/7)     IGHD3-3*01   4    -------------------------------------------------------------.......----------------------  10
J  97.8% (45/46)    IGHJ4*02     3    -----------------------------------------------------------------------------------.......  9

                                      ---->                                  
                                      D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_5935   285  ACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  323
J  97.8% (45/46)    IGHJ4*02     10   ............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_335116

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD3-16*01                                                                                           10.3    115   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGAAAGA	GGGGG	CTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC	ARDQKEGAPDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	241	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5936   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (241/245)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5936   91   TGGATTGGGTATATCTTTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (241/245)  IGHV4-59*01  139  ................A.........................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  K  E  G  A  P  D  Y 
                    Query_5936   181  CAATTCTCCCTGAAACTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC  270
V  98.4% (241/245)  IGHV4-59*01  229  ..G...........G..................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   --------------------------------------------------------------------------.....-----------  22
J  100.0% (41/41)   IGHJ4*02     8    -----------------------------------------------------------------------------------.......  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5936   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (41/41)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_288416

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            350     9e-99
IGHD2-8*02                                                                                            21.8    0.044
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAA	AGTCACGGGGGGG	AGGATATGGTACTG	ATAATAAGTACTAGTC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAAGTCACGGGGGGGAGGATATGGTACTGATAATAAGTACTAGTCACTTCTACTACGGTCTGGACGTC	AKSHGGEDMVLIISTSHFYYGLDV	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  E  A  S  G  F  T  F  S  D  F  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5937  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAGTGATTTTGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  95.2% (236/248)  IGHV3-9*01  47   .....................C...................GA.....A.........................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  S  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5937  91   AGTGGGTCTCAAGTATTAGTTGGAATAGTGGCAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (236/248)  IGHV3-9*01  137  ...........G...................T..........................................................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><---------------------------
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  L  Y  Y  C  A  K  S  H  G  G  E  D  M  
                    Query_5937  181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGCGAGTTGACGACACGGCCTTGTACTATTGTGCAAAAAGTCACGGGGGGGAGGATATGG  270
V  95.2% (236/248)  IGHV3-9*01  227  ..........G.....................A...C...G..............T..C.........----------------------  294
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD2-8*02  1    ---------------------------------------------------------------------------------.......T.  9

                                     ----CDR3-IMGT------------------------------>                              
                                     V  L  I  I  S  T  S  H  F  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_5937  271  TACTGATAATAAGTACTAGTCACTTCTACTACGGTCTGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTCC  344
D  92.9% (13/14)    IGHD2-8*02  10   .....---------------------------------------------------------------------  14
J  94.3% (50/53)    IGHJ6*02    7    ---------------------...A..........A................A.....................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_288414

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           339     2e-95
IGHD5-18*01                                                                                           27.6    8e-04
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCTACCGGAA	GTGGATACAACTATGGT	AAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCTACCGGAAGTGGATACAACTATGGTAATAACTGGTTCGACCCG	ARDPTGSGYNYGNNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  A  S  V  S  H  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_5938   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGCCTCCGTCAGTCATTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  94.3% (231/245)  IGHV4-59*02  49   ...................C...........G..........AG.........................C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  G  G  I  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_5938   91   TGGATTGGATATATCTATTACGGGGGGATCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*02  139  ........G............A.T....G...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  Y 
                    Query_5938   181  CAGTTCTCCCTGAGGCTGAGCTCTCTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGACCCTACCGGAAGTGGATACAACTAT  270
V  94.3% (231/245)  IGHV4-59*02  229  .............A..........G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD5-18*01  1    ----------------------------------------------------------------------------.........G....  14

                                      -------------------->                                  
                                       G  N  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5938   271  GGTAATAACTGGTTCGACCCGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  94.1% (16/17)    IGHD5-18*01  15   ...----------------------------------------------------  17
J  98.0% (48/49)    IGHJ5*02     3    ------..............C..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_288415

Length=413
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           369     2e-104
IGHD3-16*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              73.7    3e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GCCACACTGCA	TATGATTACGCTTCGGGGAGTTAT	TTCGTAAGGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGCCACACTGCATATGATTACGCTTCGGGGAGTTATTTCGTAAGGGGCTACTTAGACAAG	ATGHTAYDYASGSYFVRGYLDK	291	356	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	69	5	0	93.2
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	44	7	0	86.3
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	102	12	0	89.5
CDR3-IMGT (germline)	291	297	7	6	1	0	85.7
Total	N/A	N/A	294	265	29	0	90.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  V  S  G  D  T  F  S  
                    Query_5939   4    AGGTCCAGCTGGTACAGTCTGGAGCTGAAGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGTCTCTGGAGACACCTTCAGCG  93
V  90.1% (265/294)  IGHV1-69*12  2    .............G........G.....G........................................CT.......G..........A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      G  Y  A  I  N  W  V  R  Q  T  P  G  Q  G  L  E  W  V  G  G  I  I  P  I  F  G  T  A  D  Y  
                    Query_5939   94   GCTATGCTATCAACTGGGTGCGCCAGACCCCTGGACAAGGACTTGAGTGGGTGGGGGGAATCATCCCTATTTTTGGTACTGCAGACTACA  183
V  90.1% (265/294)  IGHV1-69*12  92   ............G.........A...G.............G.........A....A..G...........C........A...A.....G  181
                                      S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      T  Q  K  Y  L  G  R  V  T  I  T  A  D  Q  S  T  S  T  S  Y  M  E  L  N  S  L  R  S  E  D  
                    Query_5939   184  CACAGAAGTACCTGGGCAGGGTCACTATTACCGCGGACCAATCCACGAGCACAAGCTACATGGAACTGAACAGCCTGAGGTCTGAGGACA  273
V  90.1% (265/294)  IGHV1-69*12  182  .........T..A......A.....G............G..............GC.........G....G.........A..........  271
                                      A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><----------------------------CDR3-IMGT--------------------------->       
                                      T  A  V  Y  Y  C  A  T  G  H  T  A  Y  D  Y  A  S  G  S  Y  F  V  R  G  Y  L  D  K  W  G  
                    Query_5939   274  CGGCCGTGTATTACTGTGCGACAGGCCACACTGCATATGATTACGCTTCGGGGAGTTATTTCGTAAGGGGCTACTTAGACAAGTGGGGCC  363
V  90.1% (265/294)  IGHV1-69*12  272  .....................G..------------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                    
D  91.7% (22/24)    IGHD3-16*01  5    -----------------------------------..........T..G..........-------------------------------  28
J  93.6% (44/47)    IGHJ4*02     2    ----------------------------------------------------------------------......T...T.C.......  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_5939   364  AGGGAACCCTGGTCACCGTCTCCTCAG  390
J  93.6% (44/47)    IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40498920


Query= Query_288412

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         332     3e-93
IGHD3-22*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCCCCCGA	GATAGTAGT	AAATATTACCTTAGATCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCCCCCGAGATAGTAGTAAATATTACCTTAGATCGTTTGACTAT	ARSPRDSSKYYLRSFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	229	17	0	93.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  D  V  S  G  Y  T  I  R  S  D  N  Y  W  G  W  I  R  Q  P  P  G  Q  G  L 
                    Query_5940     1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTTACACCATAAGGAGTGATAACTACTGGGGCTGGATCCGGCAGCCCCCAGGGCAGGGGCTG  90
V  93.1% (229/246)  IGHV4-38-2*01  49   ...................C.............T....C..C....G.T................................A........  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  M  Y  H  S  G  S  A  Y  Y  N  P  S  L  Q  S  R  V  A  I  S  V  D  T  S  K 
                    Query_5940     91   GAGTGGATTGGGAGTATGTATCATAGTGGGAGCGCCTACTACAACCCGTCCCTCCAGAGTCGAGTCGCCATATCCGTAGACACGTCCAAG  180
V  93.1% (229/246)  IGHV4-38-2*01  139  .................C...............A....................A...........A.......A...............  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                         N  Q  F  S  L  N  L  Y  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  R  D  S  S  K  Y 
                    Query_5940     181  AACCAGTTCTCCCTGAACCTCTACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGATCCCCCCGAGATAGTAGTAAATAT  270
V  93.1% (229/246)  IGHV4-38-2*01  229  .................G..GAG...............A...........................------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD3-22*01    11   ---------------------------------------------------------------------------.........------  19

                                        -------------------->                                  
                                         Y  L  R  S  F  D  Y  W  G  L  G  T  L  V  A  V  S  S  
                    Query_5940     271  TACCTTAGATCGTTTGACTATTGGGGCCTGGGAACCCTGGTCGCCGTCTCCTCAG  325
J  93.0% (40/43)    IGHJ4*02       6    ------------........C.......A.............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_288413

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           325     3e-91
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGGGAA	AACGAC	TGGGATCGTAGGTGGTCCGGT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGGGAAAACGACTGGGATCGTAGGTGGTCCGGTTTTCACTTC	ASRENDWDRRWSGFHF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5941   1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.0% (225/242)  IGHV4-59*08  49   ....................T......................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       L  I  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S  R  N 
                    Query_5941   91   TTGATTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGTCGACTCACCATCTCAGTAGACACGTCGAGGAAC  180
V  93.0% (225/242)  IGHV4-59*08  139  .G......G...A........A........A.....................A.......G.......A..............C.A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  S  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  N  D  W  D  R  R  W 
                    Query_5941   181  CAGTTCTCCCTGAGCGTGAACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCGAGCCGGGAAAACGACTGGGATCGTAGGTGG  270
V  93.0% (225/242)  IGHV4-59*08  229  .............AGC...G.........C................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD1-1*01   12   ---------------------------------------------------------------------......---------------  17

                                      -------------->                                  
                                       S  G  F  H  F  W  G  P  G  T  L  V  T  V  S  S  
                    Query_5941   271  TCCGGTTTTCACTTCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  319
J  93.0% (40/43)    IGHJ4*02     6    ------...G...A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_288410

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGACC	ARGDYDIGWT	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  L  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_5942   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCCTTACTCACTACTGGAGCTGGATTCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  91.8% (224/244)  IGHV4-59*01  49   .......................................AG..G.T................C.................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_5942   91   TGGATTGGATATATCTATTACAGTGGGACCACCACTTATAACCCTTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  91.8% (224/244)  IGHV4-59*01  139  ........G...................G.....AC..C.....C..................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  T  W 
                    Query_5942   181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGACCTGG  270
V  91.8% (224/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (36/36)   IGHJ5*02     16   -------------------------------------------------------------------------------------.....  20

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_5942   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (36/36)   IGHJ5*02     21   ...............................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_240205

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         402     3e-114
IGHD1-26*01                                                                                           10.3    138   
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATGCCTCCACCCGTAC	GTGGG	GTTTTC	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGCCTCCACCCGTACGTGGGGTTTTCACAACTGGTTCGACCCC	ARHASTRTWGFHNWFDP	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  N  T  F  T  S  Y
                    Query_5943     1    GCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGAAACACCTTTACCAGCTA  90
V  94.5% (273/289)  IGHV5-10-1*01  6    ........................G................................................T...G............  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  K  W  M  G  R  I  D  P  T  A  S  Y  P  D  Y  S  P
                    Query_5943     91   CTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGAAGTGGATGGGGAGGATTGATCCTACTGCCTCTTATCCCGACTACAGCCC  180
V  94.5% (273/289)  IGHV5-10-1*01  96   ........................................G........................G..A.......A..A..........  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  S  Q  G  H  V  P  T  S  S  D  K  S  T  S  T  A  S  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_5943     181  GTCCTCCCAAGGCCACGTCCCCACCTCCTCTGACAAGTCCACCAGCACTGCCTCCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (273/289)  IGHV5-10-1*01  186  .....T.............A...T...AG............T...........A....................................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------------CDR3-IMGT-------------------->                          
                                          I  Y  Y  C  A  R  H  A  S  T  R  T  W  G  F  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V
                    Query_5943     271  CATATATTACTGTGCGAGACATGCCTCCACCCGTACGTGGGGTTTTCACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGT  360
V  94.5% (273/289)  IGHV5-10-1*01  276  ...G...............-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD1-26*01    7    ------------------------------------.....-------------------------------------------------  11
J  100.0% (51/51)   IGHJ5*02       1    -----------------------------------------------...........................................  43

                                                
                                          S  S  
                    Query_5943     361  CTCCTCAG  368
J  100.0% (51/51)   IGHJ5*02       44   ........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_206909

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           369     2e-104
IGHD7-27*01                                                                                           12.2    36    
IGHJ5*02                                                                                              39.1    6e-07 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD7-27*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	GGGCCAACCGCCTGGGTGTTAAC	ACTGGG	ACCTTCTTTTAGT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACGGGCCAACCGCCTGGGTGTTAACACTGGGACCTTCTTTTAGTCC	AKRANRLGVNTGTFF*S	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	263	27	0	90.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  G  S  G  D  T  F  P  G  Y
                    Query_5944   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGAGACACCTTTCCCGGCTA  90
V  90.7% (263/290)  IGHV5-51*01  6    .............................A....................................T......T...G....A..A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  F  P  G  Y  S  D  T  K  Y  S  Q
                    Query_5944   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAGGGCCTGGAGTGGATGGGGTTCATCTTTCCTGGTTACTCTGATACCAAATACAGCCA  180
V  90.7% (263/290)  IGHV5-51*01  96   .................................A..................A......A.......G............G........C  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  Q  G  Q  A  T  F  S  A  V  R  S  I  G  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_5944   181  GGCCTTCCAAGGCCAGGCCACCTTCTCAGCCGTCAGGTCAATCGGCACCGCCTACCTGCAGTGGAGTAGTTTGAAGGCGTCGGACACCGC  270
V  90.7% (263/290)  IGHV5-51*01  186  .T...............T....A.........A..A...C...A......................C..CC.......C...........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  S  A  K  R  A  N  R  L  G  V  N  T  G  T  F  F  *  S  W  G  Q  R  T  L  F  S  F
                    Query_5944   271  TATTTATTACAGTGCGAAACGGGCCAACCGCCTGGGTGTTAACACTGGGACCTTCTTTTAGTCCTGGGGCCAGCGAACCCTTTTCTCCTT  360
V  90.7% (263/290)  IGHV5-51*01  276  C..G......T......G..----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD7-27*01  4    -------------------------------------------......-----------------------------------------  9
J  85.7% (30/35)    IGHJ5*02     16   --------------------------------------------------------------...........G.......GG..A..G.  43

                                             
                                        S  S 
                    Query_5944   361  CTCCTCA  367
J  85.7% (30/35)    IGHJ5*02     44   .......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_288418

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           352     3e-99
IGHD4-17*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCAGGCA	TGACTACG	ATGGTATAATTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGGCATGACTACGATGGTATAATTCCTGACTAC	ARGRHDYDGIIPDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5945   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-33*01  47   .............................................G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  V  W  Y  D  G  D  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5945   91   AGTGGGTGTCCGTTGTATGGTATGATGGAGATAAAAAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (237/249)  IGHV3-33*01  137  ........G.A...A..............AG...T.....C.................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  R  L  R  A  E  D  T  A  L  Y  Y  C  A  R  G  R  H  D  Y  D  G  
                    Query_5945   181  AGAACACGCTGTATCTCCAAATGAACAGACTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAGGCAGGCATGACTACGATGGTA  270
V  95.2% (237/249)  IGHV3-33*01  227  ................G...........C.....................G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD4-17*01  1    ----------------------------------------------------------------------------........------  8

                                      ------------->                                  
                                      I  I  P  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_5945   271  TAATTCCTGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  318
J  97.6% (40/41)    IGHJ4*02     8    -------.............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_273147

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           265     5e-73
IGHD3-16*01                                                                                           18.0    0.61 
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACAACG	TATGCTTAT	GTCAGTGCTTGGGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAACGTATGCTTATGTCAGTGCTTGGGGATGATGCTTTTGATGTC	ARRQRMLMSVLGDDAFDV	246	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	23	7	0	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	97	17	0	85.1
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	209	40	0	83.9


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  V  T  T  T  R  Y  S  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_5946   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTCCGTCACCACTACTAGATACTCCTGGGGTTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  83.9% (209/249)  IGHV4-39*01  50   .....TCC...A....C.............G....A...G..G..G...T....A......C..........................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Q  M  F  Y  G  G  S  T  Y  Q  N  P  S  L  N  S  R  V  T  V  S  V  D  P  S  
                    Query_5946   94   TGGAATGGATTGGGCAGATGTTCTATGGTGGGAGCACGTACCAGAACCCGTCGCTGAATAGTCGAGTCACCGTGTCCGTTGACCCGTCCA  183
V  83.9% (209/249)  IGHV4-39*01  140  ....G.........AGT..C.AT...A..........C...T.C........C..C..G............A.A.....A...A......  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  S  Q  F  F  L  N  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  R  Q  R  M  L  M  S  
                    Query_5946   184  AGAGTCAGTTCTTCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCTGTATATTATTGTGCGAGACGACAACGTATGCTTATGTCAG  273
V  83.9% (209/249)  IGHV4-39*01  230  ...AC.......C......G....G...................A.......G.....C..........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD3-16*01  26   ----------------------------------------------------------------------------.........-----  34

                                      IMGT--------------------->                                  
                                      V  L  G  D  D  A  F  D  V  W  G  Q  G  T  G  V  T  V  S  S  
                    Query_5946   274  TGCTTGGGGATGATGCTTTTGATGTCTGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  333
J  96.0% (48/50)    IGHJ3*01     1    ----------...............................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_239180

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           339     2e-95
IGHD3-9*01                                                                                            23.8    0.010
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCGG	TTACGATTTTTTGTCTGG	G	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGCGGTTACGATTTTTTGTCTGGG	ARDRGYDFLSG	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	234	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  F  R  D  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5947   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATATTCAGAGATGGTTACTACTGGAGCTGGATCCGCCAACACCCAGGGAAGGGC  90
V  93.2% (234/251)  IGHV4-31*03  49   ......................................CAG...T.G...........................G...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_5947   91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGAGAACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATTTCAATTGACACCTCT  180
V  93.2% (234/251)  IGHV4-31*03  139  ................A..................C......................................A...G.A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  D  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  A  Y  Y  C  A  R  D  R  G  Y  D  F  L 
                    Query_5947   181  AAGGACCAGTTCTCCCTGAACCTGAGCTCTGTGACTGCCGCGGACACGGCCGCTTATTACTGCGCGAGAGATCGCGGTTACGATTTTTTG  270
V  93.2% (234/251)  IGHV4-31*03  229  ...A................G...............................TG........T........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (16/18)    IGHD3-9*01   4    -----------------------------------------------------------------------------.......A.....  16

                                      ----->                                
                                       S  G  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5947   271  TCTGGGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  308
D  88.9% (16/18)    IGHD3-9*01   17   A....---------------------------------  21
J  100.0% (32/32)   IGHJ4*02     15   ------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_225300

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD1-26*01                                                                                           10.3    113  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCGGAAGAA	GGGAG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGGAAGAAGGGAGATTGACTAC	AGGRREIDY	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	225	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  N  H  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5948   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTAATCACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.8% (225/240)  IGHV4-59*01  49   ........................................G..G.T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  D  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5948   91   TGGATTGGGTATCTTTATTACGATGGTGACACCAAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  93.8% (225/240)  IGHV4-59*01  139  ............A.C......AG...GAG......C......................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  G  R  R  E  I  D  Y  W  G 
                    Query_5948   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGGGCGGAAGAAGGGAGATTGACTACTGGGGC  270
V  93.8% (225/240)  IGHV4-59*01  229  ...............C...............................G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  9    ----------------------------------------------------------------------.....---------------  13
J  100.0% (42/42)   IGHJ4*02     7    ----------------------------------------------------------------------------..............  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_5948   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  100.0% (42/42)   IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_239181

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-72*01                                                                                           350     9e-99
IGHD2-2*01                                                                                            12.2    34   
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-72*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCTA	CGAGGGCGGGGCGG	ACCAGC	CGCCCCACGAGGGAAGCTTCCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTACGAGGGCGGGGCGGACCAGCCGCCCCACGAGGGAAGCTTCCCACTACAACGCGAGGGACGTC	ATRAGRTSRPTREASHYNARDV	249	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	252	4	4	0	0	100
Total	N/A	N/A	252	238	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  N  D  L  Y  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5949   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAATGACCTCTACATACACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (238/252)  IGHV3-72*01  47   ....................................C.....G.....A......GG.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  I  G  L  T  R  N  K  A  N  S  Y  T  T  E  Y  A  A  S  V  Q  G  R  F  T  I  S  R  D  
                    Query_5949   91   AGTGGATTGGCCTTACTAGAAACAAAGCTAATAGTTACACCACAGAGTACGCCGCGTCTGTGCAGGGCAGATTCACCATCTCAAGAGATG  180
V  94.4% (238/252)  IGHV3-72*01  137  .....G......G..................C..............A...............A.A.........................  226
                                      E  W  V  G  R  T  R  N  K  A  N  S  Y  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  N  S  L  F  L  Q  V  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  T  R  A  G  R  T  
                    Query_5949   181  ATTCAAAGAACTCACTGTTTCTGCAAGTGAATAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTGCTACGAGGGCGGGGCGGACCA  270
V  94.4% (238/252)  IGHV3-72*01  227  ..................A.......A....C........................................------------------  298
                                      D  S  K  N  S  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A                    
D  100.0% (6/6)     IGHD2-2*01   17   --------------------------------------------------------------------------------------....  20

                                      -------CDR3-IMGT--------------------------->                                 
                                      S  R  P  T  R  E  A  S  H  Y  N  A  R  D  V  W  G  P  G  T  T  V  S  V  S  S 
                    Query_5949   271  GCCGCCCCACGAGGGAAGCTTCCCACTACAACGCGAGGGACGTCTGGGGCCCAGGGACCACGGTCAGCGTCTCCTCA  347
D  100.0% (6/6)     IGHD2-2*01   21   ..---------------------------------------------------------------------------  22
J  88.7% (47/53)    IGHJ6*02     10   ------------------------.....T...GT.T..............A..............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_204183

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           279     3e-77
IGHD5-18*01                                                                                           18.0    0.56 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	222	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	10	11	2	2	0	0	100
CDR1-IMGT	12	35	24	19	5	0	79.2
FR2-IMGT	36	86	51	49	2	0	96.1
CDR2-IMGT	87	107	21	17	4	0	81
FR3-IMGT	108	221	114	104	10	0	91.2
CDR3-IMGT (germline)	222	229	8	8	0	0	100
Total	N/A	N/A	220	199	21	0	90.5


Alignments

                                        <-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-----CDR2-IM
                                         G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  W  I  G  Y  I  H  Y  S  
                    Query_5950   10   CTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGTGGATTGGATATATCCATTACAGTG  99
V  90.5% (199/220)  IGHV4-59*01  74   ......G........G.AG..A......................C............................G......T.........  163
                                         G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  

                                      GT-----><----------------------------------------------------FR3-IMGT---------------------
                                      G  I  T  N  Y  N  P  S  L  K  S  R  A  T  V  S  V  D  T  S  K  S  Q  I  S  L  S  L  S  S  
                    Query_5950   100  GCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCGTTTCAGTAGACACGTCCAAGAGCCAGATCTCCCTGAGCCTGAGCTCTG  189
V  90.5% (199/220)  IGHV4-59*01  164  .G.GC.............................A.T....A.A...................A....T.........AG..........  253
                                      G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  

                                      -------------------------------><----------------------CDR3-IMGT--------------------->    
                                      V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F  G  S  N  W  F  D  P  W  
                    Query_5950   190  TGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCCTGGG  279
V  90.5% (199/220)  IGHV4-59*01  254  ..............A.......G.................--------------------------------------------------  293
                                      V  T  A  A  D  T  A  V  Y  Y  C  A  R                                                     
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------.......C.G..A.....---------------------  18
J  98.0% (48/49)    IGHJ5*02     3    -----------------------------------------------------------------------...................  21

                                                                    
                                      G  Q  G  A  L  V  T  V  S  S  
                    Query_5950   280  GCCAGGGAGCCCTGGTCACCGTCTCCTCAG  309
J  98.0% (48/49)    IGHJ5*02     22   ........A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_225607

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5951   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5951   91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........GT........T.......G...............................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_5951   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.1% (233/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5951   271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_225604

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           339     2e-95
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CATGCTTTCCTCGACTGATATGT	CGTTCGGGGGA	TTTTTGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACATGCTTTCCTCGACTGATATGTCGTTCGGGGGATTTTTGATTGACCAG	ARDMLSSTDMSFGGFLIDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	234	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  S  S  R  S  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_5952   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGACTCCATCAGCAGTAGAAGTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGA  90
V  93.2% (234/251)  IGHV4-39*02  49   ...................C...........G...............T...........................C.............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  E  S  R  V  A  I  S  I  D  T  S 
                    Query_5952   91   CTGGAATGGATTGGGAATATCTATTATAGTGGGAGCACCGACTACAACCCGTCCCTCGAGAGTCGAGTCGCCATATCGATAGACACGTCC  180
V  93.2% (234/251)  IGHV4-39*02  139  .....G..........G......................T.................A...........A.......CG...........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  M  L  S  S  T  D 
                    Query_5952   181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACCGCCGCAGACACGGCTATTTATTACTGTGCGAGAGACATGCTTTCCTCGACTGAT  270
V  93.2% (234/251)  IGHV4-39*02  229  ........C............C....C........................G.G.................-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       M  S  F  G  G  F  L  I  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5952   271  ATGTCGTTCGGGGGATTTTTGATTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  90.9% (10/11)    IGHD3-16*01  13   ----....T......-------------------------------------------------  23
J  95.2% (40/42)    IGHJ4*02     7    ----------------------.....T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_225605

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           291     5e-81
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	213	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_5953   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  88.8% (213/240)  IGHV4-59*01  49   ..................A......................T.GT.A...C....G.............C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R 
                    Query_5953   91   TGGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGA  180
V  88.8% (213/240)  IGHV4-59*01  139  .......GG.....C.ATT................C..C...........C.....................G.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G 
                    Query_5953   181  CACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGT  270
V  88.8% (213/240)  IGHV4-59*01  229  ..G...........G....G............T..............G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-22*01  7    -----------------------------------------------------------------------------..........A..  19

                                      ----------------------->                                  
                                       G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5953   271  GGCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  328
D  93.3% (14/15)    IGHD3-22*01  20   ..--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    --------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_154809

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         302     3e-84
IGHD2-15*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCCCTCAG	ATTGTAGTG	ATGACAGGTGCAACAACGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCCCTCAGATTGTAGTGATGACAGGTGCAACAACGCGTTTGACTAC	ARGPSDCSDDRCNNAFDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	21	3	3	77.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	245	221	21	3	90.2


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S     Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_5954     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGT---TACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  87
V  90.2% (221/245)  IGHV4-38-2*02  49   ..............................TA.........C...GGT..........................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  A  S  I  Y  H  N  G  A  A  F  S  T  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_5954     88   GAGTGGATTGCAAGTATCTATCATAATGGGGCCGCCTTCTCCACCCCGTCCCTCAAGAGTCGGGTCACCATATCAGTTGACACGTCCAAG  177
V  90.2% (221/245)  IGHV4-38-2*02  139  ..........GG.............G....AG.A...A..A..A..................A..............A............  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                         N  Q  F  S  L  K  V  T  S  V  T  A  A  G  T  A  L  Y  Y  C  A  R  G  P  S  D  C  S  D  D 
                    Query_5954     178  AACCAGTTCTCCCTGAAGGTGACGTCTGTGACTGCCGCAGGCACGGCCTTATATTACTGTGCGAGGGGCCCCTCAGATTGTAGTGATGAC  267
V  90.2% (221/245)  IGHV4-38-2*02  229  ..................C...GC........C.......A.......G.G..............-------------------------  293
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (9/9)     IGHD2-15*01    6    ----------------------------------------------------------------------------.........-----  14

                                        GT--------------------->                                  
                                         R  C  N  N  A  F  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_5954     268  AGGTGCAACAACGCGTTTGACTACTGGGGCCAGGGAACACTGGTCATCGTCTCCTCAG  325
J  95.3% (41/43)    IGHJ4*02       6    ---------------.......................C.......C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_225603

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_5955   1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  87.0% (214/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_5955   91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCACCATCTCAGTAGACAAGTCCAAG  180
V  87.0% (214/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A................A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_5955   181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  87.0% (214/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_5955   271  GGTTTTGATTCCTGGGGTCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  88.4% (38/43)    IGHJ4*02     6    ---.....C.A......C......AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_225600

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           324     8e-91
IGHD4-17*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCCCCCTCCTGTG	GGTGACTAC	GTCAGCGGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCCCCCTCCTGTGGGTGACTACGTCAGCGGCCTTGACTAT	AKPPPVGDYVSGLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  T  T  S  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5956   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCATGTTCACCACCTCTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.9% (227/247)  IGHV3-30*18  47   ......................A.............CC....GT.G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5956   91   AGTGGGTGGCAGTCATCTCATATGATGGAAGTAATACGTACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGGGACAATTCCA  180
V  91.9% (227/247)  IGHV3-30*18  137  .............T..A...................AA.....T...................................A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  S  L  Q  M  S  S  L  R  P  E  D  S  G  A  Y  Y  C  A  K  P  P  P  V  G  D  Y  
                    Query_5956   181  AGAACACCCTGTCTCTGCAAATGAGCAGCCTGAGACCTGAGGACTCGGGTGCGTATTACTGTGCGAAGCCCCCTCCTGTGGGTGACTACG  270
V  91.9% (227/247)  IGHV3-30*18  227  .......G....A...........A..........G........A...C..T...............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD4-17*01  8    --------------------------------------------------------------------------------.........-  16

                                      ---------------->                                  
                                      V  S  G  L  D  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_5956   271  TCAGCGGCCTTGACTATTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  321
J  95.2% (40/42)    IGHJ4*02     7    ---------.......C................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_225601

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           371     7e-105
IGHD2-2*01                                                                                            18.0    0.60  
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAC	TAACGATTGGAC	TACCATCTGCTA	AGGGGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGACTAACGATTGGACTACCATCTGCTAAGGGGGACGGTATGGACGTC	TRLTIGLPSAKGDGMDV	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	110	4	0	96.5
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	246	9	0	96.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  S  A  M  H  W  V  R  Q  P  S  G  K  G  L  
                    Query_5957   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTCGCTCTGCTATGCACTGGGTCCGCCAGCCTTCCGGGAAAGGGCTGG  90
V  96.5% (246/255)  IGHV3-73*01  47   .........A..................................G..........................G..................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  S  N  T  N  S  Y  A  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_5957   91   AGTGGGTTGGCCGTATTAGAAGCAACACTAACAGTTACGCGACAGAATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATG  180
V  96.5% (246/255)  IGHV3-73*01  137  .........................AG..................C............................................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  K  N  T  A  Y  L  Q  M  H  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  L  T  I  G  L  
                    Query_5957   181  ATTCAAAGAACACGGCATATCTGCAAATGCACAGCCTGAAAACCGAGGACACGGCCGTGTATTATTGTACTAGACTAACGATTGGACTAC  270
V  96.5% (246/255)  IGHV3-73*01  227  ................G............A..................................C..........---------------  301
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  91.7% (11/12)    IGHD2-2*01   16   ---------------------------------------------------------------------------------------...  18

                                      DR3-IMGT-------------------->                                 
                                      P  S  A  K  G  D  G  M  D  V  W  G  R  G  T  T  V  I  V  S  S 
                    Query_5957   271  CATCTGCTAAGGGGGACGGTATGGACGTCTGGGGCCGAGGGACCACGGTCATCGTCTCCTCA  332
D  91.7% (11/12)    IGHD2-2*01   19   ..G......-----------------------------------------------------  27
J  95.7% (45/47)    IGHJ6*02     16   ---------------.....................A..............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_154804

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           417     6e-119
IGHD3-9*01                                                                                            23.8    0.012 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCACT	TTACAATATTTTGAC	ACATTACCAACCTC	TGAGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCACTTTACAATATTTTGACACATTACCAACCTCTGAGTAC	ARATLQYFDTLPTSEY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  N  V  S  C  K  A  S  G  Y  S  F  T  R  Y 
                    Query_5958   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAACGTCTCCTGCAAGGCTTCTGGTTACAGCTTTACCAGGTAC  91
V  96.2% (278/289)  IGHV1-18*04  7    ..................................................G.........................C.........C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  D  W  M  G  W  V  S  A  N  N  G  K  T  N  Y  A  Q 
                    Query_5958   92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGACTGGATGGGATGGGTCAGCGCAAACAATGGTAAAACGAACTATGCACAG  181
V  96.2% (278/289)  IGHV1-18*04  97   .G.......................................G............A.......TT..........C..A............  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_5958   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.2% (278/289)  IGHV1-18*04  187  ...C......................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  A  T  L  Q  Y  F  D  T  L  P  T  S  E  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_5958   272  GTGTATTACTGTGCGAGAGCCACTTTACAATATTTTGACACATTACCAACCTCTGAGTACTGGGGCCAGGGAACCCTGGTTACCGTCTCC  361
V  96.2% (278/289)  IGHV1-18*04  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  93.3% (14/15)    IGHD3-9*01   4    ------------------------....G..........---------------------------------------------------  18
J  95.1% (39/41)    IGHJ4*02     8    -----------------------------------------------------...C.......................C.........  44

                                          
                                       S  
                    Query_5958   362  TCAG  365
J  95.1% (39/41)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_154807

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           318     6e-89
IGHD3-10*01                                                                                           14.1    8.6  
IGHJ3*01                                                                                              44.9    1e-08


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCAGCAGAAAGAGAC	TCGGGGA	ATCTTTAG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCAGCAGAAAGAGACTCGGGGAATCTTTAGTGATGGTTTGGATTTA	ARQQKETRGIFSDGLDL	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  D  H  H  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_5959   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTGACCACCACATGAGTTGGATCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  91.1% (225/247)  IGHV3-11*01  47   ....................G..........................T..T.......C..............T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  G  Y  I  R  S  G  G  T  T  M  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5959   91   AGTGGCTTGGATACATTAGAAGTGGTGGGACCACTATGTACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  91.1% (225/247)  IGHV3-11*01  137  .....G..TC.........T...A....T.GT..C..A....................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      N  N  F  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  Q  Q  K  E  T  R  G  
                    Query_5959   181  ACAACTTTCTATATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCCTCTATTACTGTGCGAGGCAGCAGAAAGAGACTCGGGGAA  270
V  91.1% (225/247)  IGHV3-11*01  227  .G....CA..G............A..........................G.G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-10*01  14   ----------------------------------------------------------------------------------.......-  20

                                      GT-------------------->                                  
                                      I  F  S  D  G  L  D  L  W  A  P  G  T  V  V  T  V  S  S  
                    Query_5959   271  TCTTTAGTGATGGTTTGGATTTATGGGCCCCCGGGACAGTGGTCACTGTCTCTTCAG  327
J  82.0% (41/50)    IGHJ3*01     1    -------.....C...T...G.C....G..AA......A.......C..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_154806

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            254     1e-69
IGHD1-20*01                                                                                           18.0    0.64 
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD1-20*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	GAGACCGGATGTGGTGC	TAACTGGCACGA	AACGAGGTTACACGAAACGAGGTG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGTGAGAGACCGGATGTGGTGCTAACTGGCACGAAACGAGGTTACACGAAACGAGGTGACTGGTTCGACCCC	ACERPDVVLTGTKRGYTKRGDWFDP	243	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	15	9	0	62.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	12	12	0	50
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	206	44	0	82.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  L  P  F  A  D  H  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5960   1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTGGACTCCCCTTTGCTGACCATTACATGAGCTGGGTCCGCCAGGCTCCGGGGAAGGGACTGG  90
V  82.4% (206/250)  IGHV3-7*03   47   .....................C..C.......T..A.....AG.AG.T...GG.......................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  Q  I  P  P  G  G  P  D  A  Y  Y  A  E  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_5960   91   AGTGGGTGGCCCAAATTCCGCCCGGTGGACCTGATGCGTACTATGCGGAATCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  82.4% (206/250)  IGHV3-7*03   137  ...........A.C..AAA..AA.A....AG...GAAA.......T...C.......A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  K  S  V  H  L  Q  M  D  S  L  R  A  D  D  T  A  L  Y  R  C  A  C  E  R  P  D  V  V  L  
                    Query_5960   181  AGAAGTCAGTTCATCTGCAAATGGACAGCCTGAGAGCCGACGACACAGCCCTCTACCGCTGTGCGTGTGAGAGACCGGATGTGGTGCTAA  270
V  82.4% (206/250)  IGHV3-7*03   227  ....C...C.GT...........A................G.....G...G.G..TTA.......A.A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD1-20*01  5    ---------------------------------------------------------------------------------------...  7

                                      -----CDR3-IMGT-------------------------------->                                  
                                      T  G  T  K  R  G  Y  T  K  R  G  D  W  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_5960   271  CTGGCACGAAACGAGGTTACACGAAACGAGGTGACTGGTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  351
D  91.7% (11/12)    IGHD1-20*01  8    ....A....------------------------------------------------------------------------  16
J  97.9% (47/48)    IGHJ5*02     4    ---------------------------------..............................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_273148

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           369     2e-104
IGHD3-3*01                                                                                            33.4    1e-05 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCCATCTTGGCGG	TTACGCTTATTGGAGTGGTTATT	CCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCCATCTTGGCGGTTACGCTTATTGGAGTGGTTATTCCCTTGACTAC	ARDPHLGGYAYWSGYSLDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5961   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (243/250)  IGHV3-33*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  S  N  K  Y  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_5961   91   AGTGGGTGGCAATTATATGGTATGATGGAAGTAATAAATATCATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  97.2% (243/250)  IGHV3-33*01  137  ...........G............................CT................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  G  D  D  T  A  V  Y  F  C  A  R  D  P  H  L  G  G  Y  
                    Query_5961   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGGCGACGACACGGCTGTGTATTTCTGTGCGAGAGATCCCCATCTTGGCGGTTACG  270
V  97.2% (243/250)  IGHV3-33*01  227  ....................................C...G................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.3% (21/23)    IGHD3-3*01   4    -------------------------------------------------------------------------------------.....  8

                                      -IMGT----------------------->                                  
                                      A  Y  W  S  G  Y  S  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5961   271  CTTATTGGAGTGGTTATTCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  91.3% (21/23)    IGHD3-3*01   9    A..T..............---------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_154803

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           338     5e-95
IGHD3-22*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GTGTCGCCTCC	TATTATTATGACAGT	GATGGCTATGGTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGTCGCCTCCTATTATTATGACAGTGATGGCTATGGTCCCTACTACTCCAGTATGGACGTC	ASVASYYYDSDGYGPYYSSMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5962   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTTACCTTCAATACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  93.9% (231/246)  IGHV3-33*03  47   ..................................C.......G..G.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  E  N  S  
                    Query_5962   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTACTACTTACTATGCAGATTCTGTGAAGGGCCGATTCACCATCTCCAGAGAGAACTCCA  180
V  93.9% (231/246)  IGHV3-33*03  137  .................................A..AA...........C..C.............................C.......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  G  V  Y  F  C  A  S  V  A  S  Y  Y  Y  D  
                    Query_5962   181  AGAACACCCTGTACCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGGTGTATATTTCTGTGCGAGTGTCGCCTCCTATTATTATGACA  270
V  93.9% (231/246)  IGHV3-33*03  227  .......G.....T..................................C...G....A........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  86.7% (13/15)    IGHD3-22*01  2    -----------------------------------------------------------------------------.....C.....T.  14

                                      -CDR3-IMGT--------------------------->                                 
                                      S  D  G  Y  G  P  Y  Y  S  S  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5962   271  GTGATGGCTATGGTCCCTACTACTCCAGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  86.7% (13/15)    IGHD3-22*01  15   ..---------------------------------------------------------------------  16
J  96.4% (53/55)    IGHJ6*02     8    ----------------........A.G............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_154802

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACCTTGACTAC	ARRGYSYGYYYLDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5963   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (239/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  I  T  I  S  I  D  T  S  K  N 
                    Query_5963   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAATCACCATATCTATAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  ............................................................G..........AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_5963   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5963   271  CTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    T..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_217499

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD1-26*01                                                                                           12.2    33   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTGGACCC	GGGAGC	ACAGTAGGTCGTCAGCATTAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGGACCCGGGAGCACAGTAGGTCGTCAGCATTATTACTACAATATGGACGTC	ATGPGSTVGRQHYYYNMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	230	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5964   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  93.5% (230/246)  IGHV3-23*01  47   ..........................................................C..........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  S  G  D  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  F  R  D  N  S  
                    Query_5964   91   AGTGGGTCTCAGTTATTAGTGGCAGTGGTGACAACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTTCAGAGACAACTCCA  180
V  93.5% (230/246)  IGHV3-23*01  137  ............C.........T.......GT.G.........................................C.........T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  I  L  Y  L  Q  V  N  S  L  R  V  A  D  T  A  V  Y  Y  C  A  T  G  P  G  S  T  V  G  
                    Query_5964   181  AGAACATACTGTATCTGCAAGTAAACAGCCTCAGAGTCGCGGACACGGCCGTATATTACTGTGCGACTGGACCCGGGAGCACAGTAGGTC  270
V  93.5% (230/246)  IGHV3-23*01  227  ......CG............A.G........G....C..A..........................------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD1-26*01  9    --------------------------------------------------------------------------......----------  14

                                      -IMGT----------------------->                                 
                                      R  Q  H  Y  Y  Y  N  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5964   271  GTCAGCATTATTACTACAATATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  96.1% (49/51)    IGHJ6*02     12   -----------......GG...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_89629

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           310     1e-86
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD6-19*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGCG	GGCTGG	N/A	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCTGGCAATTGGTTCGCCCCC	REAGGLAIGSPP	242	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	25	21	20	0	1	95.2
CDR1-IMGT	26	55	30	25	5	0	83.3
FR2-IMGT	56	106	51	49	2	0	96.1
CDR2-IMGT	107	127	21	18	3	0	85.7
FR3-IMGT	128	241	114	104	10	0	91.2
CDR3-IMGT (germline)	242	248	7	7	0	0	100
Total	N/A	N/A	244	223	20	1	91.4


Alignments

                                      <-----FR1-IMGT------><----------CDR1-IMGT---------><--------------------FR2-IMGT----------
                                       S  L   P  A  L  S  L  G  A  P  S  E  G  G  L  T  T  G  V  G  S  A  S  T  Q  G  R  A  W  S
                    Query_5965   6    TCCCTC-CCTGCACTGTCTCTGGGGGCTCCATCAGAAGGGGGGCTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAG  94
V  91.4% (223/244)  IGHV4-31*01  55   ......A................T...........C..T..T.G............C.................................  144
                                       S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                        G  L  D  T  S  I  T  V  R  E  P  S  T  T  R  P  S  R  I  K  *  P  Y  Q  E  T  R  L  Q  T
                    Query_5965   95   TGGATTGGATACATCTATTACGGTGAGAGAACCCAGTACAACCCGTCCCTCAAGAATCAAGTGACCATATCAGGAGACACGTCTACAAAC  184
V  91.4% (223/244)  IGHV4-31*01  145  ........G............A...G...C...T.C...................G..T...T..........T...........AG...  234
                                       W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                        S  S  P  *  G  *  A  L  *  L  P  R  T  R  P  S  I  T  V  R  E  A  G  G  L  A  I  G  S  P
                    Query_5965   185  CAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCTGGCAATTGGTTCGCC  274
V  91.4% (223/244)  IGHV4-31*01  235  .............A.................................G................--------------------------  298
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------......-------------  18
J  90.0% (45/50)    IGHJ5*02     2    -----------------------------------------------------------------------------...C.......A.  14

                                      -->                                  
                                        P  G  A  R  E  S  W  S  P  S  P  Q 
                    Query_5965   275  CCCTGGGGCCAGGGAATCCTGGTCCCCGTCCCCTCAG  311
J  90.0% (45/50)    IGHJ5*02     15   ................C.......A.....T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_89628

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           363     2e-102
IGHD3-16*02                                                                                           27.6    8e-04 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGC	TTTGGGGGATTTATCGT	CATTAGTGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCTTTGGGGGATTTATCGTCATTAGTGGGCTTTGACTAC	ARALGDLSSLVGFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	260	28	0	90.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  V  S  E  Y  N  F  S  N  Y
                    Query_5966   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAAATCTCCTGTAAGGTGTCGGAATACAACTTTAGTAATTA  90
V  90.3% (260/288)  IGHV5-51*03  6    ...................................................G.............GT..T.G.....G.....CC.GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  A  W  M  G  I  I  S  P  D  D  S  D  T  R  Y  S  P
                    Query_5966   91   CTGGATTGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGCTTGGATGGGGATCATCTCTCCTGATGACTCTGACACCAGATACAGTCC  180
V  90.3% (260/288)  IGHV5-51*03  96   ......C..................................AG................A.....G.........T...........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  P  V  T  M  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  A  P  A
                    Query_5966   181  GTCGTTCCAAGGCCCGGTCACCATGTCAGTCGACAAGTCCATTAGTACCGCCTACCTCCAGTGGAGCAGCCTGAAGGCCTCGGCCCCCGC  270
V  90.3% (260/288)  IGHV5-51*03  186  ...C..........A.........C....C............C..C...........G.........................A.A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  A  R  A  L  G  D  L  S  S  L  V  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5966   271  CATATATTATTGTGCGAGGGCTTTGGGGGATTTATCGTCATTAGTGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  90.3% (260/288)  IGHV5-51*03  276  ...G.....C........------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  94.1% (16/17)    IGHD3-16*02  15   ---------------------.........G.......----------------------------------------------------  31
J  100.0% (44/44)   IGHJ4*02     5    ------------------------------------------------..........................................  46

                                        
                                        
                    Query_5966   361  AG  362
J  100.0% (44/44)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_17558

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_5967   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  95.8% (277/289)  IGHV5-51*03  6    ..............................................................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  S  L  E  G  M  G  I  I  Y  P  G  D  S  Y  T  T  Y  R  P
                    Query_5967   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAAGCCTGGAGGGGATGGGAATCATCTATCCTGGTGACTCTTATACCACATACCGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   ..................................G........T.......G.....................G......G....A....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  Q  G  Q  G  T  N  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_5967   181  GGCCTTCCAAGGCCAGGGCACCAACTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  .T...............T.....T..................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5967   271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.8% (277/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_89624

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           405     3e-115
IGHD2-8*02                                                                                            12.2    34    
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	A	GTACTG	ACACC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTACTGACACCGACTAT	ARSTDTDY	284	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  D  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_5968   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCGGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  94.8% (274/289)  IGHV5-51*03  6    .............................A............G..................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  A  T  T  R  Y  S  P
                    Query_5968   91   CTGGATCGGCTGGGTGCGCCAGAGGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACGCTACTACCAGATACAGCCC  180
V  94.8% (274/289)  IGHV5-51*03  96   .......................T...............................A..............T..GA...............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  S  A
                    Query_5968   181  GTCGTTCGAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACAGCGC  270
V  94.8% (274/289)  IGHV5-51*03  186  ...C...C..............A................................C..............................C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------CDR3-IMGT------>                                  
                                        M  Y  Y  C  A  R  S  T  D  T  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_5968   271  CATGTATTATTGTGCGAGAAGTACTGACACCGACTATTGGGGCCAGGGCACCCTGGTCATCGTCTCCTCAG  341
V  94.8% (274/289)  IGHV5-51*03  276  .........C.........----------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                     
D  100.0% (6/6)     IGHD2-8*02   9    --------------------......---------------------------------------------  14
J  92.5% (37/40)    IGHJ4*02     9    -------------------------------.....C...........A..........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_89627

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAATGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAATGGGTGGCTGGCTGACTTC	TRGNGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_5969   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG....T..............A.............A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5969   91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.4% (228/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  N  G  W  L  A  D  F  R 
                    Query_5969   181  CAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTAATGGGTGGCTGGCTGACTTCAGG  270
V  93.4% (228/244)  IGHV4-59*01  229  ...................G...........................G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  92.7% (38/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A.T..  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_5969   271  GGCCAGGGAACCCTCGTCACCGTCTCCTCAG  301
J  92.7% (38/41)    IGHJ4*02     18   ..............G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_217491

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           347     7e-98
IGHD2-8*02                                                                                            16.1    2.1  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD2-8*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAC	TACTGGCGGTG	AA	GATAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTACTACTGGCGGTGAAGATATC	ARSTTGGEDI	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  F  Y  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_5970   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTTCTACATGACCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-11*06  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  S  S  R  S  G  H  S  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_5970   91   AATGGGTTTCATTCATTAGTAGTAGAAGTGGTCACTCAAACTACGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  94.8% (235/248)  IGHV3-11*06  137  .G..........A............T...A..T..A...................................A..................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      R  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  S  T  T  G  G  E  D  
                    Query_5970   181  GGAACTCACTGTTTTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAAGTACTACTGGCGGTGAAGATA  270
V  94.8% (235/248)  IGHV3-11*06  227  A...........A.C...................................G.................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD2-8*02   10   -------------------------------------------------------------------------......T....------  20
J  100.0% (38/38)   IGHJ3*02     11   --------------------------------------------------------------------------------------....  14

                                      ->                                
                                      I  W  G  Q  G  T  M  V  T  V  S  S
                    Query_5970   271  TCTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  304
J  100.0% (38/38)   IGHJ3*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_89621

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           422     2e-120
IGHD3-16*01                                                                                           12.2    37    
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGA	AATTGGTAACACCTAATTGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTC	ARRGKLVTPNWDYGMDV	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	294	282	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_5971   1    CAGGTCCAGCTTGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  90
V  95.9% (282/294)  IGHV1-18*04  1    .....T.....G.............C................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  C  Y  N  G  N  T  K  Y 
                    Query_5971   91   AACTACGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGTTGTTACAATGGTAACACAAAGTAT  180
V  95.9% (282/294)  IGHV1-18*04  91   .G...............................................................CGC..................C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  L  K  H  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_5971   181  GCACTGAAGCACCAGGGCAGAGTCACCATGACCACAGACACATCGACGAGCACAGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGAC  270
V  95.9% (282/294)  IGHV1-18*04  181  ....A.....T.................................C..............C..............................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><--------------------CDR3-IMGT-------------------->                     
                                       T  A  V  Y  Y  C  A  R  R  G  K  L  V  T  P  N  W  D  Y  G  M  D  V  W  G  Q  G  T  T  V 
                    Query_5971   271  ACGGCCGTGTATTACTGTGCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTC  360
V  95.9% (282/294)  IGHV1-18*04  271  ........................------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD3-16*01  18   -------------------------......-----------------------------------------------------------  23
J  100.0% (50/50)   IGHJ6*02     13   ----------------------------------------------------......................................  50

                                                  
                                       T  V  S  S 
                    Query_5971   361  ACCGTCTCCTCA  372
J  100.0% (50/50)   IGHJ6*02     51   ............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_89620

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           305     3e-85
IGHD7-27*01                                                                                           18.0    0.58 
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCGACTTGAAC	AACTGGGGA	TGGGCAGGGGAGGGTGTTTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCGACTTGAACAACTGGGGATGGGCAGGGGAGGGTGTTTATGATGTC	ATDLNNWGWAGEGVYDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	218	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  I  S  R  Y  Y  W  N  W  I  R  Q  P  P  G  K  A  M  E 
                    Query_5972   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGCCTCCATCAGTCGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGCAATGGAG  90
V  90.5% (218/241)  IGHV4-59*01  49   ...................C...........G..........A............G..........................G.C.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  T  Y  H  T  G  D  T  D  Y  N  P  S  L  R  N  R  V  A  I  S  M  D  A  S  K  N 
                    Query_5972   91   TGGATCGGATATACCTATCACACTGGGGACACCGACTACAACCCCTCCCTCAGGAATCGAGTCGCCATATCAATGGACGCGTCCAAGAAC  180
V  90.5% (218/241)  IGHV4-59*01  139  .....T..G....T....T...G....AG....A..................A..G.......A........G.A...A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  D  L  N  N  W  G  W  A  G 
                    Query_5972   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACGGCTGCGGACACGGCCGTATACTACTGTGCGACCGACTTGAACAACTGGGGATGGGCAGGG  270
V  90.5% (218/241)  IGHV4-59*01  229  .............................C.................G..T..........-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD7-27*01  3    ------------------------------------------------------------------------.........---------  11

                                      ----------------->                                  
                                       E  G  V  Y  D  V  W  G  Q  G  R  M  V  T  V  S  S  
                    Query_5972   271  GAGGGTGTTTATGATGTCTGGGGCCAAGGGAGAATGGTCACCGTCTCTTCAG  322
J  97.6% (40/41)    IGHJ3*01     10   -----------....................C....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_89623

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            347     7e-98
IGHD1-20*01                                                                                           12.2    33   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTAAACCGGGATCGTC	GTATAA	AGGGTACG	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAAACCGGGATCGTCGTATAAAGGGTACGACTGCTTTGACCAC	ARLKPGSSYKGYDCFDH	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  I  H  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5973   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGGGATCCATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-7*01   47   .........................................A.T.G.T.........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  T  F  Y  V  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5973   91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGAGACATTCTATGTGGACTCTTTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (235/248)  IGHV3-7*01   137  ....................C...............A..A.............G....................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  L  K  P  G  S  S  Y  
                    Query_5973   181  AGAATTCACTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTATATTACTGTGCGAGACTTAAACCGGGATCGTCGTATA  270
V  94.8% (235/248)  IGHV3-7*01   227  ....C.....G.......................................G.G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-20*01  2    -------------------------------------------------------------------------------------.....  6

                                      GT-------------------->                                
                                      K  G  Y  D  C  F  D  H  W  G  P  G  T  L  V  T  V  S  S
                    Query_5973   271  AAGGGTACGACTGCTTTGACCACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTC  325
D  100.0% (6/6)     IGHD1-20*01  7    .------------------------------------------------------  7
J  93.5% (43/46)    IGHJ4*02     1    ---------...A.......T.........A........................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_217495

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           291     5e-81
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACG	TACGGTGAC	CCTACACTCCCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACGTACGGTGACCCTACACTCCCATACTTTGACTCT	ARTYGDPTLPYFDS	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	217	31	0	87.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  M  S  S  G  G  Y  L  W  S  W  I  R  Q  N  P  G  K  G 
                    Query_5974   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCTATGAGCAGTGGCGGCTATCTCTGGAGCTGGATCCGCCAAAACCCAGGGAAGGGC  90
V  87.5% (217/248)  IGHV4-31*03  49   ...............................G...C..C........T..T..CTA..................GC..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  T  S  Y  Y  S  P  S  P  K  R  R  L  T  I  S  V  G  T  S 
                    Query_5974   91   CTGGAGTGGATTGGGAGCATCTATTACAGTGGAACCTCCTACTACAGCCCGTCCCCCAAGAGGCGACTTACAATATCAGTAGGCACTTCT  180
V  87.5% (217/248)  IGHV4-31*03  139  ...............TA...............G.G.A.........A........T......T...G....C..........A...G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       E  K  H  F  S  L  K  L  T  S  M  T  A  A  D  T  A  I  Y  F  C  A  R  T  Y  G  D  P  T  L 
                    Query_5974   181  GAGAAGCACTTCTCCCTGAAGCTGACCTCTATGACTGCCGCGGACACGGCCATATATTTTTGTGCGAGGACGTACGGTGACCCTACACTC  270
V  87.5% (217/248)  IGHV4-31*03  229  A....C..G................G....G....................G.G....AC........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (9/9)     IGHD4-17*01  5    ------------------------------------------------------------------------.........---------  13

                                      -------------->                                  
                                       P  Y  F  D  S  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_5974   271  CCATACTTTGACTCTTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  319
J  93.5% (43/46)    IGHJ4*02     3    ---..........AC.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_273954

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           335     4e-94
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  C  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_5975   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTGCTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.9% (229/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G..A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_5975   91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCC  180
V  93.9% (229/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C.................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_5975   181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  93.9% (229/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5975   271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_273950

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           311     4e-87
IGHD3-10*01                                                                                           10.3    119  
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGG	CGGGG	GCTCGGCCGGGGCC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGCGGGGGCTCGGCCGGGGCCTTTGATATC	AREGGGSAGAFDI	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	225	26	0	89.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  G  Y  Y  F  W  S  W  V  R  Q  H  P  G  K  G 
                    Query_5976   1    ACCCTGTCCCTCACCTGCACTGTCTCAGGTGACTCCATCAGCAGTGGTTATTACTTTTGGAGTTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  89.6% (225/251)  IGHV4-31*03  49   ..........................T....G................GG.....AC.....C...A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  M  H  H  S  G  S  S  F  Y  S  A  S  L  K  S  R  I  A  M  S  V  D  T  S 
                    Query_5976   91   CTGGAGTGGATTGGGTACATGCATCACAGTGGAAGCAGCTTCTACAGCGCGTCCCTCAAGAGTCGAATTGCCATGTCAGTGGACACCTCT  180
V  89.6% (225/251)  IGHV4-31*03  139  ....................CT..T.......G....C..A.....A.C.................G..A....A.....A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  T  G  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  G  S  A  G 
                    Query_5976   181  AAGAACCAGTTCTCCCTGAAGCTGACTGGTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGAGGGCGGGGGCTCGGCCGGG  270
V  89.6% (225/251)  IGHV4-31*03  229  .........................GCTC......T...................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  15   --------------------------------------------------------------------------.....-----------  19

                                      ----------->                                  
                                       A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_5976   271  GCCTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  316
J  100.0% (43/43)   IGHJ3*02     8    ---...........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_273953

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            285     4e-79
IGHD1-1*01                                                                                            14.1    8.0  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACTAAAACAAGAC	CTGGGACGAC	G	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACTAAAACAAGACCTGGGACGACG	ARDTKTRPGTT	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	20	9	0	69
CDR1-IMGT	30	56	27	14	13	0	51.9
FR2-IMGT	57	104	51	45	3	3	88.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	250	218	29	3	87.2


Alignments

                                     <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                        S  L  R  L  S  C  E  G  S  G  F  T  F  S  S  Y  A  F     S  W  V  R  Q  A  P  G  K  G  
                    Query_5977  1    GGTCCCTGAGACTCTCCTGTGAAGGCTCTGGATTCACCTTTAGCAGCTATGCCTTC---AGCTGGGTCCGCCAGGCTCCAGGGAAGGGGC  87
V  87.2% (218/250)  IGHV4-4*02  47   ..A.....TCC...A....C.CT.T......TGG.T..A.C.....TAG.AA..GGTGG..T............C.C.............  136
                                        T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                     ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                     L  E  W  I  G  E  I  Y  H  S  G  T  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  
                    Query_5977  88   TGGAGTGGATTGGGGAAATCTATCATAGTGGGACCGCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCA  177
V  87.2% (218/250)  IGHV4-4*02  137  .................................G.A......................................................  226
                                     L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                     -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                     K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  K  T  R  P  G  
                    Query_5977  178  AGAACCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATACTAAAACAAGACCTGGGA  267
V  87.2% (218/250)  IGHV4-4*02  227  ...................G....G.............................................--------------------  296
                                     K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD1-1*01  8    ------------------------------------------------------------------------------------....A.  13

                                     ---->                                  
                                     T  T  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5977  268  CGACGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
D  90.0% (9/10)     IGHD1-1*01  14   ....-----------------------------------  17
J  100.0% (34/34)   IGHJ4*02    15   -----..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_273952

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD1-26*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGGTTCCGTAGG	AGTGGGAGCTACTAC	ACTTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGTTCCGTAGGAGTGGGAGCTACTACACTTTGGTACTTTGACTAC	AKGSVGVGATTLWYFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	126	24	22	2	0	91.7
FR3-IMGT	127	240	114	112	2	0	98.2
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  M  G  L  E  
                    Query_5978   2    CCCTGTCCCTCACCTGCGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGATGGGGCTGGAGT  91
V  95.9% (234/244)  IGHV3-23*01  50   .....AGA...T....T.............................................................A...........  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  A  I  S  G  S  G  R  S  T  Y  Y  A  D  S  V  K  G  R  F  T  F  S  R  D  N  S  K  
                    Query_5978   92   GGGTCTCAGCTATTAGTGGTAGTGGTCGCAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCTTCTCCAGAGACAATTCCAAGA  181
V  95.9% (234/244)  IGHV3-23*01  140  ..........................G.T.......................................A.....................  229
                                      W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------------CDR3-IMGT-
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  S  V  G  V  G  A  T  
                    Query_5978   182  ACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGGTTCCGTAGGAGTGGGAGCTACTA  271
V  95.9% (234/244)  IGHV3-23*01  230  .................................................A..............--------------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  100.0% (15/15)   IGHD1-26*01  6    ----------------------------------------------------------------------------..............  19

                                      ------------------->                                  
                                      T  L  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5978   272  CACTTTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  100.0% (15/15)   IGHD1-26*01  20   .-----------------------------------------------------  20
J  100.0% (46/46)   IGHJ4*02     3    --------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_45654

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            383     1e-108
IGHD3-9*01                                                                                            35.3    4e-06 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	ATTACGATATCTTGACTGGTAATT	GGGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCATTACGATATCTTGACTGGTAATTGGGCGTTTGATTAC	ARDHYDILTGNWAFDY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	268	23	0	92.1


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  D  Y
                    Query_5979  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACTTTCAGCGACTA  90
V  92.1% (268/291)  IGHV1-2*04  6    ..................G...........................................................C....C..G...  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       Y  I  H  W  V  R  Q  G  P  G  Q  G  L  E  W  M  G  W  I  N  P  R  T  G  D  T  N  Y  A  Q
                    Query_5979  91   CTATATCCACTGGGTGCGACAGGGCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTCGGACTGGAGACACAAATTATGCACA  180
V  92.1% (268/291)  IGHV1-2*04  96   ......G................C........................................AAC.G...T.G......C........  185
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       R  F  Q  G  W  V  T  M  S  R  D  T  S  T  T  T  V  Y  M  D  L  S  R  L  K  S  D  D  T  A
                    Query_5979  181  GAGGTTTCAGGGCTGGGTCACCATGTCTAGGGACACGTCCACCACCACAGTTTACATGGACCTGAGCAGGCTGAAATCTGACGACACGGC  270
V  92.1% (268/291)  IGHV1-2*04  186  ..A......................A.C.............T..G.....CC........G.............G...............  275
                                       K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                     ------------><-------------------CDR3-IMGT------------------>                             
                                       V  Y  Y  C  A  R  D  H  Y  D  I  L  T  G  N  W  A  F  D  Y  W  G  Q  G  T  L  L  T  V  S
                    Query_5979  271  CGTTTATTACTGTGCGAGAGATCATTACGATATCTTGACTGGTAATTGGGCGTTTGATTACTGGGGCCAGGGAACCCTGCTCACCGTCTC  360
V  92.1% (268/291)  IGHV1-2*04  276  ...G.................---------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                        
D  91.7% (22/24)    IGHD3-9*01  3    -----------------------..........T.........T...-------------------------------------------  26
J  95.3% (41/43)    IGHJ4*02    6    ----------------------------------------------------.....C.....................G..........  43

                                          
                                       S  
                    Query_5979  361  CTCAG  365
J  95.3% (41/43)    IGHJ4*02    44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_45655

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*03                                                                                           296     2e-82
IGHD3-22*01                                                                                           23.8    0.012
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TAGTCCGAAAACCGCTGGGA	TATGACTATGAGAGTAGCGGT	GA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTAGTCCGAAAACCGCTGGGATATGACTATGAGAGTAGCGGTGATGACTAC	AKVVRKPLGYDYESSGDDY	261	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	102	54	50	1	3	92.6
CDR2-IMGT	103	146	39	20	4	15	51.3
FR3-IMGT	147	260	114	105	9	0	92.1
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	232	17	18	86.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><-------------------FR2-IMGT---------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_5980   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTTAGTAACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  86.9% (232/267)  IGHV3-23*03  47   ....................G......................C.G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -----------><-----------------CDR2-IMGT----------------><---------------------------------
                                      E  W  V  S  G  I  T  S  R  G  G  S  S  G  G  G  G  G  T  Y  Y  A  D  S  V  K  G  R  F  T  
                    Query_5980   91   AGTGGGTCTCAGGCATTACTAGTAGGGGTGGTAGTAGTGGAGGGGGTGGCGGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCA  180
V  86.9% (232/267)  IGHV3-23*03  137  ............---...T.TA...C...........---------------.........T............................  208
                                      E  W  V  S     V  I  Y  S  G  G  S  S                 T  Y  Y  A  D  S  V  K  G  R  F  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  R  D  N  S  K  N  T  L  F  L  L  M  K  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  V  
                    Query_5980   181  TCTCCAGGGACAATTCCAAGAACACACTGTTTCTGCTAATGAAGAGCCTGAGAGTCGAGGACACGGCCGTCTATTACTGTGCGAAAGTAG  270
V  86.9% (232/267)  IGHV3-23*03  209  .......A..T..............G....A.....A......C..........C...............A................---  295
                                      I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K     

                                      --------------CDR3-IMGT----------------------->                                
                                      V  R  K  P  L  G  Y  D  Y  E  S  S  G  D  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_5980   271  TCCGAAAACCGCTGGGATATGACTATGAGAGTAGCGGTGATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  349
D  85.7% (18/21)    IGHD3-22*01  2    -----------------...T.......T.....T...-----------------------------------------  22
J  100.0% (39/39)   IGHJ4*02     8    ----------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_273959

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           315     5e-88
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  G  Y  Y  L  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_5981   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTGGTTATTATTTGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  91.0% (223/245)  IGHV4-59*08  49   ......................................C...A....C..C.G..G.................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  L  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_5981   91   TGGCTTGGTTTGATCTCTTACAGCGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGAAC  180
V  91.0% (223/245)  IGHV4-59*08  139  ...A....G.AT....A......T.....C......................................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  V  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  H  R  A  A  A  G  P 
                    Query_5981   181  CAGTTCTCCCTGAGAGTGACCTCTCTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATCCCCATAGAGCAGCAGCTGGCCCC  270
V  91.0% (223/245)  IGHV4-59*08  229  .............AGC...G....G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD6-13*01  7    --------------------------------------------------------------------------............----  18
J  93.2% (41/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_5981   271  TTTGACAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  313
J  93.2% (41/44)    IGHJ4*02     6    ......T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_273958

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           336     1e-94
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GTC	TACAACTGG	CGGGAGGGGGCGTTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTCTACAACTGGCGGGAGGGGGCGTTCACTAC	GLQLAGGGVHY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5982   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGCAATTACGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.2% (229/243)  IGHV3-33*01  47   ...........................................T.GC..T........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  S  N  K  H  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_5982   91   AGTGGGTGGCAATTATATGGTATGATGGAAGTAACAAACACTATGCAGACTCCGTCCAGGGCCGATTCACCATATCCAGAGACAATTCCA  180
V  94.2% (229/243)  IGHV3-33*01  137  ...........G......................T...T................GA................C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  G  L  Q  L  A  G  G  G  V  
                    Query_5982   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCTGTATATTACTGTGGTCTACAACTGGCGGGAGGGGGCGTTC  270
V  94.2% (229/243)  IGHV3-33*01  227  ........C...........................C...G...........G..........---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (9/9)     IGHD1-1*01   3    ------------------------------------------------------------------.........---------------  11

                                      ---->                                  
                                      H  Y  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_5982   271  ACTACAGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.4% (38/39)    IGHJ4*02     10   .....T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_45652

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            385     4e-109
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	248	2	0	99.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5983   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.2% (248/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_5983   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  99.2% (248/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_5983   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  99.2% (248/250)  IGHV3-7*01   227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5983   271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_45653

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHD1-26*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGTGAGA	GGGAGCTA	TTGTGGGGAGCAGTCAACGAGGATTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGTGAGAGGGAGCTATTGTGGGGAGCAGTCAACGAGGATTGCTTTGACTCC	ARDSERELLWGAVNEDCFDS	242	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	28	27	1	0	96.4
CDR1-IMGT	29	52	24	21	3	0	87.5
FR2-IMGT	53	103	51	47	4	0	92.2
CDR2-IMGT	104	127	24	23	1	0	95.8
FR3-IMGT	128	241	114	106	8	0	93
CDR3-IMGT (germline)	242	249	8	7	1	0	87.5
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  I  N  H  A  M  T  W  V  R  Q  A  P  G  K  G  L  E
                    Query_5984   1    GTCCCTGAGACTCTCCTGTGCAGCATCTGGATTCACCTTTATCAACCATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGA  90
V  92.8% (231/249)  IGHV3-23*01  48   ........................C................G..G.T.........G.................................  137
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E

                                      ------------><-------CDR2-IMGT------><----------------------------------------------------
                                        W  V  S  S  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  K
                    Query_5984   91   GTGGGTCTCGAGTATAAGTGGTAGTGGTGGTAGCACATACTACGCAGATTCCGTCAAGGGCCGGTTCACCATCTCCAGAGACATTTCCAA  180
V  92.8% (231/249)  IGHV3-23*01  138  .........AGC...T................................C.....G............................A......  227
                                        W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K

                                      FR3-IMGT----------------------------------------------------><-------------------------CDR
                                        R  T  M  Y  L  Q  M  N  S  L  R  D  D  D  T  A  V  Y  Y  C  A  R  D  S  E  R  E  L  L  W
                    Query_5984   181  GAGGACGATGTATCTGCAAATGAACAGCCTGAGAGACGACGACACGGCCGTATATTACTGTGCGAGAGATAGTGAGAGGGAGCTATTGTG  270
V  92.8% (231/249)  IGHV3-23*01  228  ..AC...C...........................C...G.........................A...---------------------  296
                                        N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                        
D  100.0% (8/8)     IGHD1-26*01  9    -----------------------------------------------------------------------------........-----  16

                                      3-IMGT------------------------>                                
                                        G  A  V  N  E  D  C  F  D  S  W  G  R  G  S  L  V  T  V  S  S
                    Query_5984   271  GGGAGCAGTCAACGAGGATTGCTTTGACTCCTGGGGCCGGGGAAGCCTGGTCACCGTCTCCTC  333
J  92.9% (39/42)    IGHJ4*02     5    ---------------------........A........A.....C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_46302

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           333     1e-93
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	TCACCTAT	TATGATAATAGTGGAAATTAC	CCCCGAAATAACAA	GTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGTCACCTATTATGATAATAGTGGAAATTACCCCCGAAATAACAAGTTCGACCCC	AGVTYYDNSGNYPRNNKFDP	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  V  S  G  F  I  F  S  S  Y  E  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5985   1    GGTCCCTGAGACTCTCCTGTTCAGTCTCTGGATTTATCTTCAGTTCATATGAAATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-48*03  47   ....................G...C.........C.C.......AGT..........A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  T  S  G  G  A  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_5985   91   AGTGGATTTCATATATTAGTACTAGTGGTGGCGCCATATACTACGCAGATTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.8% (231/249)  IGHV3-48*03  137  .....G.......C.......G.......A.TA................C........................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  G  V  T  Y  Y  D  N  S  
                    Query_5985   181  AGAACTCACTGTATCTGCAAATGAACAGTTTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGGGAGTCACCTATTATGATAATAGTG  270
V  92.8% (231/249)  IGHV3-48*03  227  ............................CC...................................A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  85.7% (18/21)    IGHD3-22*01  8    -----------------------------------------------------------------------------.......G.....  20

                                      R3-IMGT------------------------>                                  
                                      G  N  Y  P  R  N  N  K  F  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_5985   271  GAAATTACCCCCGAAATAACAAGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  336
D  85.7% (18/21)    IGHD3-22*01  21   .TT.....----------------------------------------------------------  28
J  97.7% (43/44)    IGHJ5*02     8    ----------------------................................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_46301

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         375     3e-106
IGHD3-22*01                                                                                           48.8    3e-10 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	CAAC	TACTATGATAGTAGTGGTTATTACT	TTGTTTGGTGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGCAACTACTATGATAGTAGTGGTTATTACTTTGTTTGGTGGTAC	ASNYYDSSGYYFVWWY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	244	4	0	98.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_5986     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  98.4% (244/248)  IGHV4-30-4*01  49   ..................A..............................A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_5986     91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  98.4% (244/248)  IGHV4-30-4*01  139  ..........................................................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                         K  N  Q  F  S  L  K  L  G  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  N  Y  Y  D  S  S  G 
                    Query_5986     181  AAGAACCAGTTCTCCCTGAAGCTGGGCTCTGTGACTGCCGCTGACACGGCCGTGTATTACTGTGCCAGCAACTACTATGATAGTAGTGGT  270
V  98.4% (244/248)  IGHV4-30-4*01  229  ........................A................A..........................----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (25/25)   IGHD3-22*01    5    ------------------------------------------------------------------------..................  22

                                        GT------------------>                                  
                                         Y  Y  F  V  W  W  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5986     271  TATTACTTTGTTTGGTGGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  100.0% (25/25)   IGHD3-22*01    23   .......------------------------------------------------  29
J  100.0% (37/37)   IGHJ4*02       12   ------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_46307

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         388     5e-110
IGHD4-4*01                                                                                            14.1    9.5   
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-4*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATAGAGAC	GACTATAGTA	CGTCGTCCTC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAGAGACGACTATAGTACGTCGTCCTCCGACCCC	ARHRDDYSTSSSDP	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	70	1	0	98.6
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	106	8	0	93
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                        <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                           Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  A  N  
                    Query_5987     7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCAGGATACAGCTTTGCTAATC  96
V  92.8% (269/290)  IGHV5-10-1*01  5    ......................................................................T............A.C.GCT  94
                                           Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  

                                        ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                        H  W  I  T  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  M  L  D  P  S  D  S  Y  S  N  Y  S  
                    Query_5987     97   ACTGGATCACCTGGGTCCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGATGCTTGATCCCAGTGACTCTTATAGCAACTACAGTC  186
V  92.8% (269/290)  IGHV5-10-1*01  95   .........G......G......A..............................G.A.......T.............C.........C.  184
                                        Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  

                                        -------------------------------------------FR3-IMGT---------------------------------------
                                        P  S  F  Q  G  H  V  T  F  S  A  D  K  T  I  N  T  A  Y  P  H  W  S  S  L  K  A  S  D  T  
                    Query_5987     187  CGTCCTTCCAAGGCCACGTCACCTTCTCAGCTGACAAGACCATCAACACTGCCTACCCACATTGGAGCAGCCTGAAGGCCTCGGACACCG  276
V  92.8% (269/290)  IGHV5-10-1*01  185  .......................A..............T......G...........TG..G............................  274
                                        P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                        -------------><----------------CDR3-IMGT--------------->                                  
                                        A  I  Y  Y  C  A  R  H  R  D  D  Y  S  T  S  S  S  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5987     277  CCATATATTACTGTGCGAGACATAGAGACGACTATAGTACGTCGTCCTCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  366
V  92.8% (269/290)  IGHV5-10-1*01  275  ....G...............----------------------------------------------------------------------  294
                                        A  M  Y  Y  C  A  R                                                                       
D  90.0% (9/10)     IGHD4-4*01     2    -----------------------------.....C....---------------------------------------------------  11
J  100.0% (41/41)   IGHJ5*02       11   -------------------------------------------------.........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_46306

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           343     2e-96
IGHD4-17*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGTATCT	TACGGTGAC	CCCACAAGTTACTCACGGTG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGGGTATCTTACGGTGACCCCACAAGTTACTCACGGTGTTGACTTC	VKGYLTVTPQVTHGVDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  V  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_5988   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCGTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-23*01  47   ....................................C.T......G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  I  S  G  A  Y  T  Y  Y  V  D  A  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_5988   91   AGTGGGTCTCATCTATTAGTATTAGTGGTGCTTACACATACTACGTAGACGCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAGTTCCA  180
V  94.0% (234/249)  IGHV3-23*01  137  ...........G........GG........G.AG...........C....T.................................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  I  Y  Y  C  V  K  G  Y  L  T  V  T  P  
                    Query_5988   181  AGAACACGCTGTATCTGCAAATGAGCAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGTGAAAGGGTATCTTACGGTGACCCCAC  270
V  94.0% (234/249)  IGHV3-23*01  227  ........................A.........................G............C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD4-17*01  5    ----------------------------------------------------------------------------.........-----  13

                                      GT-------------------->                                  
                                      Q  V  T  H  G  V  D  F  W  G  L  G  T  L  A  T  V  S  S  
                    Query_5988   271  AAGTTACTCACGGTGTTGACTTCTGGGGCCTGGGAACCCTGGCCACCGTCTCCTCAG  327
J  92.9% (39/42)    IGHJ4*02     7    ---------------......A........A...........T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_46305

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           385     4e-109
IGHD3-3*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	GGAGAGTCTG	CGATTTCTGGAGTGGTTAT	CCCCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTAC	AREESLRFLEWLSPDY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  P  C  K  A  S  G  Y  T  L  T  R  Y 
                    Query_5989   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTAAAGGTCCCCTGCAAGGCCTCTGGTTACACCTTGACCAGATAT  91
V  92.4% (268/290)  IGHV1-18*01  7    ...............................................G......T..........T..............T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  M  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  S  N  I  N  Y  A  Q 
                    Query_5989   92   AGTATGTCTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATAGCAACATAAATTATGCACAG  181
V  92.4% (268/290)  IGHV1-18*01  97   G....CAGC....................................................C.......G.T....C...C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  L  G  R  V  T  M  T  I  D  T  S  A  N  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_5989   182  AAACTCCTGGGCAGAGTCACCATGACCATAGACACATCCGCGAACACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.4% (268/290)  IGHV1-18*01  187  ..G....A....................C..........A...G..............................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                             
                                       V  Y  Y  C  A  R  E  E  S  L  R  F  L  E  W  L  S  P  D  Y  W  G  Q  G  T  L  V  I  V  S
                    Query_5989   272  GTGTATTATTGTGCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTC  360
V  92.4% (268/290)  IGHV1-18*01  277  ........C........A..---------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-3*01   7    ------------------------------......T............----------------------------------------  25
J  97.1% (34/35)    IGHJ4*02     9    ------------------------------------------------------............................C......  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_46304

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           350     8e-99
IGHD3-10*01                                                                                           14.1    8.5  
IGHJ5*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	CGGCCCTCGAATCCACA	TATGCTTCGG	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGCGGCCCTCGAATCCACATATGCTTCGGACTGGTTCGACCCC	ATAALESTYASDWFDP	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  P  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_5990   1    ACCCTGCCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*03  49   ......T............C..........................................C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  L  Y  D  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_5990   91   CTGGAGTGGATTGGCTACCTCTATGACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGCCGAGTTACCATATCAGTAGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*03  139  ..............G...A.....T.....................................T...........................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  N  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  A  A  L  E  S  T  Y 
                    Query_5990   181  AAGAACCAGTTCTCCCTGAACCTGACCTCTGTCACTGCCGCGGACACGGCCGTCTATTATTGTGCGACAGCGGCCCTCGAATCCACATAT  270
V  94.8% (237/250)  IGHV4-31*03  229  ....................G....G......G....................G.....C.......G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-10*01  8    ---------------------------------------------------------------------------------------...  10

                                      GT------------------>                                  
                                       A  S  D  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5990   271  GCTTCGGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  90.0% (9/10)     IGHD3-10*01  11   .G.....------------------------------------------------  17
J  100.0% (48/48)   IGHJ5*02     4    -------................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_46309

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           255     3e-70
IGHD4-17*01                                                                                           21.8    0.039
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD4-17*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CATCT	ACTGCGGTGACTAC	TGA	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACATCTACTGCGGTGACTACTGATTTTGATGTC	ATSTAVTTDFDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	30	19	5	6	63.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	13	8	0	61.9
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	247	207	34	6	83.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  A  S  T  N  S        N  W  W  S  W  V  R  Q  S  P  G  K  G 
                    Query_5991   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCACCAACAGTA------ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGG  84
V  83.8% (207/247)  IGHV4-39*01  49   ..................A............G.....T..G.....GTAGTT...AC...G.C...A........C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  R  Y  F  S  G  A  Y  Y  Y  S  P  S  L  K  S  R  V  T  I  S  A  D  T  S 
                    Query_5991   85   CTGGAGTGGATTGGGAGTCGTTATTTTAGTGGGGCCTACTACTACAGTCCGTCCCTCAAGAGCCGAGTCACCATATCCGCAGACACGTCG  174
V  83.8% (207/247)  IGHV4-39*01  139  ..................ATC....A.......AG.AC........AC..............T................T.........C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  H  F  T  L  T  L  T  S  L  T  A  A  D  T  A  I  Y  Y  C  A  T  S  T  A  V  T  T  D 
                    Query_5991   175  AAAAATCATTTCACCCTGACGTTGACGTCTCTGACCGCCGCAGACACGGCTATTTATTACTGTGCGACATCTACTGCGGTGACTACTGAT  264
V  83.8% (207/247)  IGHV4-39*01  229  ..G..C..G...T......A.C...GC...G....................G.G.............-----------------------  295
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  92.9% (13/14)    IGHD4-17*01  3    ------------------------------------------------------------------------...A..........----  16
J  97.7% (43/44)    IGHJ3*01     7    -----------------------------------------------------------------------------------------.  7

                                      -------->                                  
                                       F  D  V  W  G  R  G  T  M  V  T  V  S  S  
                    Query_5991   265  TTTGATGTCTGGGGCCGAGGGACAATGGTCACCGTCTCTTCAG  307
J  97.7% (43/44)    IGHJ3*01     8    ................A..........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_21307

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           318     6e-89
IGHD4-4*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAC	TTGGTCCGC	ACAGTAA	TGGCCCCTCTTTGAG	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGACTTGGTCCGCACAGTAATGGCCCCTCTTTGAGCTAT	ARLGPHSNGPSLSY	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	97	17	0	85.1
CDR3-IMGT (germline)	249	255	7	6	1	0	85.7
Total	N/A	N/A	255	229	26	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  A  S  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_5992   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGGTTCACCTTCAGTGCCTCTGCTATGCACTGGGTCCGCCAGGCTCCCGGGAAAGGGCTGG  90
V  89.8% (229/255)  IGHV3-73*01  47   .........A..............C....................G............................T...............  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  S  K  A  K  N  Y  A  T  E  Y  G  A  S  V  Q  G  R  F  T  T  S  R  D  
                    Query_5992   91   AGTGGGTTGGCCGTATCAGAAGCAAAGCTAAGAATTATGCGACAGAATATGGTGCGTCGGTCCAAGGCAGGTTCACCACCTCCAGAGATG  180
V  89.8% (229/255)  IGHV3-73*01  137  ................T..............C.G...C.......C.....C.........GA...............T...........  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  N  N  V  A  Y  L  Q  M  N  T  L  K  S  D  D  T  A  V  Y  F  C  A  R  L  G  P  H  S  
                    Query_5992   181  ATTCAAACAACGTGGCGTACTTACAGATGAACACCCTGAAAAGCGACGACACGGCCGTTTATTTCTGTGCTAGACTTGGTCCGCACAGTA  270
V  89.8% (229/255)  IGHV3-73*01  227  .......G...AC......TC.G..A.......G........C...G...........G....A....A......---------------  301
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (7/7)     IGHD4-4*01   6    ------------------------------------------------------------------------------------......  11

                                      IMGT--------------->                                  
                                      N  G  P  S  L  S  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_5992   271  ATGGCCCCTCTTTGAGCTATTGGGGCCAGGGGACCCAGGTCACCGTCTCCTCAG  324
D  100.0% (7/7)     IGHD4-4*01   12   .-----------------------------------------------------  12
J  92.1% (35/38)    IGHJ4*02     11   ----------------...C...........A....T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_39789

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            382     3e-108
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAAAGCGGCCGCTT	ATAGTAGTGGTTATTACT	CCCTGACTGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAAAGCGGCCGCTTATAGTAGTGGTTATTACTCCCTGACTGTTTTTGACCAC	ARDKAAAYSSGYYSLTVFDH	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	113	1	0	99.1
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	246	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_5993   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  99.2% (246/248)  IGHV4-4*02   49   ..........................................................................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_5993   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAACACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  99.2% (246/248)  IGHV4-4*02   139  ...............................G..........................................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------------CDR3
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  M  A  V  Y  Y  C  A  R  D  K  A  A  A  Y  S  S 
                    Query_5993   181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACATGGCCGTGTATTACTGTGCGAGAGACAAAGCGGCCGCTTATAGTAGT  270
V  99.2% (246/248)  IGHV4-4*02   229  ...........................................C........................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (18/18)   IGHD3-22*01  12   ----------------------------------------------------------------------------------........  19

                                      -IMGT------------------------>                                  
                                       G  Y  Y  S  L  T  V  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5993   271  GGTTATTACTCCCTGACTGTTTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  100.0% (18/18)   IGHD3-22*01  20   ..........------------------------------------------------------  29
J  97.7% (42/43)    IGHJ4*02     6    ---------------------......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_39788

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_5994   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_5994   91   GAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ...................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_5994   181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_5994   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_39781

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            369     2e-104
IGHD3-22*01                                                                                           27.6    8e-04 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTTTG	ACTATGATAGTCGTGGCTTTTAC	AGACGTTCTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTTTGACTATGATAGTCGTGGCTTTTACAGACGTTCTAACTACTTTGACTTC	ARGFDYDSRGFYRRSNYFDF	264	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	77	27	23	4	0	85.2
FR2-IMGT	78	128	51	51	0	0	100
CDR2-IMGT	129	149	21	21	0	0	100
FR3-IMGT	150	263	114	105	9	0	92.1
CDR3-IMGT (germline)	264	268	5	5	0	0	100
Total	N/A	N/A	268	252	16	0	94


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  I  T  C  T  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  
                    Query_5995   1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCATCACCTGCACTGTCTCTGGTGGCTCCATCACTACTAGTAATTGGTGGAGTTGGGTCC  90
V  94.0% (252/268)  IGHV4-4*02   26   ................T...............C........G.....................GC.G......C................  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  Q  Y  N  P  S  L  K  S  R  V  
                    Query_5995   91   GCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCCAGTACAACCCGTCACTCAAGAGTCGAGTCA  180
V  94.0% (252/268)  IGHV4-4*02   116  ...........................................................A.C...........C................  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  I  S  V  D  K  S  K  N  Q  I  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  
                    Query_5995   181  CGATATCAGTAGACAAGTCCAAGAACCAGATCTCCCTGAGGTTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGG  270
V  94.0% (252/268)  IGHV4-4*02   206  .C...........................T.........A.C....C...............................A.........--  293
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A     

                                      -------------------CDR3-IMGT------------------------>                                  
                                      G  F  D  Y  D  S  R  G  F  Y  R  R  S  N  Y  F  D  F  W  G  R  G  T  L  V  A  V  S  S  
                    Query_5995   271  GCTTTGACTATGATAGTCGTGGCTTTTACAGACGTTCTAACTACTTTGACTTCTGGGGCCGGGGAACCCTGGTCGCTGTCTCCTCAG  357
D  87.0% (20/23)    IGHD3-22*01  6    ------...........A....T.A....----------------------------------------------------------  28
J  91.7% (44/48)    IGHJ4*02     1    ---------------------------------------............A........A.............A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_39780

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           352     3e-99
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CG	TACGGTGACTAC	GTGGGGTATA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGTACGGTGACTACGTGGGGTATATTGACTCG	ARAYGDYVGYIDS	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	112	2	0	98.2
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  S  G  A  Y  Y  W  T  W  I  R  Q  H  P  G  K  G  
                    Query_5996   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCAGCAGTGGTGCTTACTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  95.2% (237/249)  IGHV4-31*01  50   .....TCC...A..................G.................G...........G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  F  I  H  Y  S  G  N  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  I  D  T  S  
                    Query_5996   94   TGGAGTGGATTGGGTTCATCCATTACAGTGGGAACACCTACTACAACCCGTCCCTCAAGAGTCTAGTAACCATATCAATAGACACGTCTA  183
V  95.2% (237/249)  IGHV4-31*01  140  ...............A....T............G.................................T.........G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  Y  G  D  Y  V  G  
                    Query_5996   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCGTACGGTGACTACGTGGGGT  273
V  95.2% (237/249)  IGHV4-31*01  230  .....................................................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD4-17*01  5    -----------------------------------------------------------------------............-------  16

                                      ---------->                                  
                                      Y  I  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_5996   274  ATATTGACTCGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  95.2% (40/42)    IGHJ4*02     7    ---......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_39783

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           291     5e-81
IGHD3-3*01                                                                                            21.8    0.041
IGHJ5*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCCTTGGGGG	TTTTTGGAGTG	AGAACATTTGGAA	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCTTGGGGGTTTTTGGAGTGAGAACATTTGGAACGACCCC	ATLGGFWSENIWNDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	216	30	0	87.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  K  S  F  T  L  N  W  V  R  Q  A  P  G  R  R  L  
                    Query_5997   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAAAAGTTTTACTTTGAATTGGGTCCGCCAGGCTCCAGGGAGGAGGCTGC  90
V  87.8% (216/246)  IGHV3-21*01  47   ...................................A......GT..C.A..GCA....C......................A.G.....G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  N  S  G  S  Y  I  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_5997   91   AGTGGGTCTCGTCCATCAGTAACAGTGGAAGTTACATATATTATGCAGAGTCTGTGAAGGGCCGATTCACCATCTCCCGAGACAACACCA  180
V  87.8% (216/246)  IGHV3-21*01  137  ..........A.....T....GT...A.T...........C..C.....C..A........................A........G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  T  V  E  D  T  G  V  Y  Y  C  A  T  L  G  G  F  W  S  E  
                    Query_5997   181  AGAATTCACTGTATCTGCAAATGAACAGTCTGACAGTCGAGGACACGGGTGTATATTACTGTGCGACCCTTGGGGGTTTTTGGAGTGAGA  270
V  87.8% (216/246)  IGHV3-21*01  227  ....C.......................C....G..C...........C...G.............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD3-3*01   10   ----------------------------------------------------------------------------...........---  20

                                      ---------------->                             
                                      N  I  W  N  D  P  W  G  Q  G  T  L  V  I  V  S
                    Query_5997   271  ACATTTGGAACGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTC  316
J  97.2% (35/36)    IGHJ5*02     11   ----------.............................C......  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_150876

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           372     2e-105
IGHD6-19*01                                                                                           12.2    34    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	GCTCCAG	GGCTGG	GATT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCCAGGGCTGGGATTCTTTGACTAT	AAPGLGFFDY	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	262	24	0	91.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  A  S  G  N  T  L  T  N  N
                    Query_5998   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCGTCAGTGAAAGTTGCCTGCAAGGCATCCGGAAACACCCTCACCAACAA  90
V  91.6% (262/286)  IGHV1-46*01  6    ..................G.......................C........G...T.............T...T.....T......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  N  K  T  T  Y  A  Q
                    Query_5998   91   CTTCATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTAATAAGACAACCTATGCACA  180
V  91.6% (262/286)  IGHV1-46*01  96   ..AT..................................................................GG..GC....G...C.....  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  L  T  M  T  R  V  T  S  T  R  T  V  Y  M  E  L  S  N  L  R  S  E  D  T  A
                    Query_5998   181  GAAGTTCCAGGGCAGACTGACCATGACTAGGGTCACGTCCACGAGAACAGTCTACATGGAGCTGAGCAACCTGAGATCTGAGGACACGGC  270
V  91.6% (262/286)  IGHV1-46*01  186  ................G.C........C....A............C......................G.....................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        V  Y  Y  C  A  A  P  G  L  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_5998   271  CGTGTATTACTGCGCGGCTCCAGGGCTGGGATTCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  347
V  91.6% (262/286)  IGHV1-46*01  276  ............T...-------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                              
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------......------------------------------------------------  18
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------.........C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_39787

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_5999   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  97.6% (282/289)  IGHV5-51*03  6    ..............................................................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  R  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_5999   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCGGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  97.6% (282/289)  IGHV5-51*03  96   ......................................T............G............................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  R  A  S  D  T  A
                    Query_5999   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  ..........................................................................A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  A  T  L  V  T  V  S  S  
                    Query_5999   271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGCAACCCTGGTCACCGTCTCCTCAG  353
V  97.6% (282/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    ------------------------------------------.................G.......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_238858

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           406     1e-115
IGHD2-8*01                                                                                            10.3    132   
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-8*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GATAG	GGAC	AATGG	CTTC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATAGGGACAATGGCTTCCTGGTACTTCGACCTC	AIGTMASWYFDL	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  S  F  G  S  Y
                    Query_6000   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGACTCCTTCGGCAGTTA  90
V  94.8% (275/290)  IGHV1-69*01  6    ..........................................................................G.A.....A....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  A  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  T  E  T  P  N  Y  A  Q
                    Query_6000   91   TGCTATCGCCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCACTGAAACACCAAACTACGCACA  180
V  94.8% (275/290)  IGHV1-69*01  96   .......AG..........................................................TT..GT...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  V  D  T  A
                    Query_6000   181  GAAGTTCCAGGGCAGAGTCACCATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGTGGACACGGC  270
V  94.8% (275/290)  IGHV1-69*01  186  .....................G..........................................................A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  I  G  T  M  A  S  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6000   271  CGTCTATTACTGTGCGATAGGGACAATGGCTTCCTGGTACTTCGACCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  353
V  94.8% (275/290)  IGHV1-69*01  276  ...G.............G..---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  100.0% (5/5)     IGHD2-8*01   14   ------------------------.....------------------------------------------------------  18
J  98.0% (49/50)    IGHJ2*01     4    ---------------------------------............T.....................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_42174

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           335     4e-94
IGHD1-26*01                                                                                           14.1    9.1  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGGGC	ACGGGG	TAGTGGG	GCCGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGGGTAGTGGGGCCGGCTGGTTCGACCCC	ARGSGAGWFDP	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	43	8	0	84.3
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	95	19	0	83.3
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	284	249	35	0	87.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  M  F  T  S  Y 
                    Query_6001   2    CAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATGTTTACCAGTTAT  91
V  87.7% (249/284)  IGHV1-18*01  7    ...................C.............................................T..........CC........C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  H  W  A  R  Q  A  P  G  Q  G  L  E  W  L  G  R  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_6001   92   GGTATACATTGGGCGCGACAGGCCCCTGGACAAGGCCTTGAGTGGCTGGGACGGATCAGCGGTTACAACGGGAACACAAACTATGCACAG  181
V  87.7% (249/284)  IGHV1-18*01  97   .....CAGC....T.....................G.........A.....T.........C......T..T..................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  D  R  V  I  L  T  I  D  T  S  T  T  T  A  Y  M  E  L  R  S  L  R  S  D  G  P  A 
                    Query_6001   182  AACCTGCAGGACAGAGTCATTCTGACCATAGACACGTCCACGACTACAGCCTACATGGAACTGAGGAGTCTCAGATCTGACGGCCCGGCC  271
V  87.7% (249/284)  IGHV1-18*01  187  ..G..C....G........CCA......C......A.......GC..............G........C..G..........A.A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  F  W  A  R  G  S  G  A  G  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  T  
                    Query_6001   272  GTCTACTTCTGGGCACGGGGTAGTGGGGCCGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCACAG  350
V  87.7% (249/284)  IGHV1-18*01  277  ..G..T.A...T..-----------------------------------------------------------------  290
                                       V  Y  Y  C  A                                                                 
D  100.0% (7/7)     IGHD1-26*01  5    --------------------.......----------------------------------------------------  11
J  95.7% (45/47)    IGHJ5*02     5    --------------------------------...................................C.......T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_42175

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           327     9e-92
IGHD3-22*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGGGGGG	TTACTAC	GCATC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGGGGTTACTACGCATCCTACTTTGACTAC	ARMGGYYASYFDY	242	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	28	28	0	0	100
CDR1-IMGT	29	52	24	24	0	0	100
FR2-IMGT	53	103	51	48	3	0	94.1
CDR2-IMGT	104	127	24	17	7	0	70.8
FR3-IMGT	128	241	114	105	9	0	92.1
CDR3-IMGT (germline)	242	247	6	6	0	0	100
Total	N/A	N/A	247	228	19	0	92.3


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E
                    Query_6002   1    GTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGA  90
V  92.3% (228/247)  IGHV3-48*03  48   ..........................................................................................  137
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E

                                      ------------><-------CDR2-IMGT------><----------------------------------------------------
                                        Y  I  S  Y  I  S  G  S  G  S  D  M  R  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  G  K
                    Query_6002   91   GTATATTTCATACATTAGCGGGAGTGGCAGTGACATGAGGTACGCAGACTCTGTGAAGGGCCGATTCATCATCTCCAGAGACAACGGCAA  180
V  92.3% (228/247)  IGHV3-48*03  138  ..GGG.............TA.T.....T...AC...ATAC............................C.................C...  227
                                        W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K

                                      FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT-----
                                        N  W  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  M  G  G  Y  Y  A  S  Y
                    Query_6002   181  GAACTGGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCTGTGTATTACTGTGCGAGAATGGGGGGTTACTACGCATCCTA  270
V  92.3% (228/247)  IGHV3-48*03  228  .....CA................................G...........T...............-----------------------  294
                                        N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                        
D  100.0% (7/7)     IGHD3-22*01  25   ---------------------------------------------------------------------------.......--------  31
J  100.0% (45/45)   IGHJ4*02     2    ---------------------------------------------------------------------------------------...  4

                                      --------->                                
                                        F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6002   271  CTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  312
J  100.0% (45/45)   IGHJ4*02     5    ..........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_42176

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           347     7e-98
IGHD3-16*01                                                                                           10.3    120  
IGHJ2*01                                                                                              102     4e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TGGGG	TGCCCACTTCAA	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGGGTGCCCACTTCAACTACTGGTACTTCGATCTC	ARWGAHFNYWYFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  A  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6003   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGCATTCACCCTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGG  90
V  94.8% (235/248)  IGHV3-30*03  47   ..............................G.......T..............................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  H  D  G  N  N  R  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6003   91   AGTGGGTGGCGGTTATATCACATGATGGAAATAATAGATACTATGCCGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (235/248)  IGHV3-30*03  137  ..........A.........T.........G.....A.........A...........................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  L  Q  M  N  S  L  R  V  E  D  T  A  I  Y  Y  C  A  R  W  G  A  H  F  N  Y  
                    Query_6003   181  AGAACACGCTGTCTCTGCAAATGAACAGCCTGAGAGTTGAGGACACGGCCATCTATTACTGTGCGAGATGGGGTGCCCACTTCAACTACT  270
V  94.8% (235/248)  IGHV3-30*03  227  ............A.......................C............TG.G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-16*01  17   --------------------------------------------------------------------.....-----------------  21
J  100.0% (53/53)   IGHJ2*01     1    -------------------------------------------------------------------------------------.....  5

                                      ------------->                                  
                                      W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6003   271  GGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  318
J  100.0% (53/53)   IGHJ2*01     6    ................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_42177

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           391     6e-111
IGHD7-27*01                                                                                           12.2    37    
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD7-27*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	CTGGGG	CCTCGGATTCCAATTTCCT	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGGGGCCTCGGATTCCAATTTCCTCTATTACTATGGAATGGACGTC	ATGASDSNFLYYYGMDV	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	19	5	0	79.2
FR3-IMGT	175	288	114	103	11	0	90.4
CDR3-IMGT (germline)	289	292	4	4	0	0	100
Total	N/A	N/A	292	271	21	0	92.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_6004   1    CAGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  90
V  92.8% (271/292)  IGHV1-69*12  1    ..............G........G..................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  G  I  I  T  A  F  G  T  T  E  Y 
                    Query_6004   91   AGGTATGCCATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCAGGGATCATCACTGCCTTTGGAACAACAGAGTAC  180
V  92.8% (271/292)  IGHV1-69*12  91   ..C.....T..............................................G..........C..AT......T...G..A.C...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       G  Q  K  F  Q  G  R  A  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  E  D 
                    Query_6004   181  GGACAGAAGTTCCAGGGCAGAGCGACGATTACCGCGGACGAATCAACGAGCACAGCCTATATGGAGCTGCGCAGTCTGAGATCTGAAGAC  270
V  92.8% (271/292)  IGHV1-69*12  181  .C....................TC....................C..............C.........A....C...........G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------------CDR3-IMGT-------------------->                     
                                       T  A  A  Y  Y  C  A  T  G  A  S  D  S  N  F  L  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V 
                    Query_6004   271  ACGGCCGCGTATTACTGTGCGACTGGGGCCTCGGATTCCAATTTCCTCTATTACTATGGAATGGACGTCTGGGGCCAAGGGACCACGGTC  360
V  92.8% (271/292)  IGHV1-69*12  271  .......T..............--------------------------------------------------------------------  292
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (6/6)     IGHD7-27*01  5    ----------------------......--------------------------------------------------------------  10
J  94.5% (52/55)    IGHJ6*02     8    -----------------------------------------------...C.....C..T..............................  50

                                                  
                                       T  V  S  S 
                    Query_6004   361  ACCGTCTCCTCA  372
J  94.5% (52/55)    IGHJ6*02     51   ............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_42170

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           305     3e-85
IGHD2-15*01                                                                                           39.1    3e-07
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCGACCGATCCCGGG	TATTGTAGTGGTGGTTTCTGCTACTC	GGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCGACCGATCCCGGGTATTGTAGTGGTGGTTTCTGCTACTCGGCGTTTGACTAC	AATDPGYCSGGFCYSAFDY	247	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	60	33	25	5	3	75.8
FR2-IMGT	61	111	51	46	5	0	90.2
CDR2-IMGT	112	132	21	17	4	0	81
FR3-IMGT	133	246	114	107	7	0	93.9
CDR3-IMGT (germline)	247	249	3	3	0	0	100
Total	N/A	N/A	249	224	22	3	90


Alignments

                                      <--------FR1-IMGT---------><-----------CDR1-IMGT-----------><--------------------FR2-IMGT-
                                       T  L  S  L  T  C  S  V  S  G  V  S  V  S  N  S  I  G  S  Y  W  S  W  I  R  Q  P  P  G  Q 
                    Query_6005   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGTCTCCGTCAGCAACAGTATTGGTTCCTATTGGAGCTGGATCCGGCAGCCCCCAGGCCAG  90
V  90.0% (224/249)  IGHV4-61*08  49   ...................C...........G...........---..GG.....A...C..........................GA..  135
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S     S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K 

                                      --------------------><-----CDR2-IMGT-----><-----------------------------------------------
                                       G  L  E  Y  I  G  Y  I  Y  Y  N  G  D  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  E  T 
                    Query_6005   91   GGACTGGAATACATTGGGTATATCTATTACAATGGAGACACCAACTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGAGACG  180
V  90.0% (224/249)  IGHV4-61*08  136  ........G.GG...................G...GAG............C...................................C...  225
                                       G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T 

                                      -----FR3-IMGT----------------------------------------------------><-----------------------
                                       S  K  N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  A  T  D  P  G  Y  C 
                    Query_6005   181  TCCAAGAACCAGTTCTCCCTTAACCTGAGCTCTGTGACTGCCGCGGACACGGCCATGTATTACTGTGCGGCGACCGATCCCGGGTATTGT  270
V  90.0% (224/249)  IGHV4-61*08  226  ....................G..G..............C..T............G..............---------------------  294
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                      
D  92.3% (24/26)    IGHD2-15*01  5    ------------------------------------------------------------------------------------......  10

                                      CDR3-IMGT----------------------->                                  
                                       S  G  G  F  C  Y  S  A  F  D  Y  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_6005   271  AGTGGTGGTTTCTGCTACTCGGCGTTTGACTACTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  337
D  92.3% (24/26)    IGHD2-15*01  11   .........AG.........-----------------------------------------------  30
J  97.7% (42/43)    IGHJ4*02     6    ------------------------.........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_333918

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           369     2e-104
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCAATCCCGTATACCCCTACCTT	GGGAGTTA	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCAATCCCGTATACCCCTACCTTGGGAGTTATGACTAT	ARANPVYPYLGSYDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	263	27	0	90.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  Q  A  S  G  Y  T  F  T  S  N
                    Query_6006   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGTCAGGCATCTGGATACACCTTCACCAGCAA  90
V  90.7% (263/290)  IGHV1-46*01  6    ..................G...............................A...T.....CA..........................T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  L  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  N  P  G  G  G  G  T  T  Y  A  Q
                    Query_6006   91   TTATTTGCACTGGGTGCGACAGGCCCCTGGACAAGGTCTTGAGTGGATGGGAGTGATCAACCCTGGTGGTGGAGGCACGACCTACGCACA  180
V  90.7% (263/290)  IGHV1-46*01  96   C...A...............................G...............A.A.........A.......TA....A.G.........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  L  S  I  T  R  D  A  S  T  T  T  V  Y  M  E  L  S  S  L  T  S  E  D  A  A
                    Query_6006   181  GAAGTTCCAGGGCAGACTCTCCATAACTCGGGACGCGTCCACGACCACAGTCTACATGGAGCTGAGCAGCCTGACATCTGAGGACGCGGC  270
V  90.7% (263/290)  IGHV1-46*01  186  ................G..A....G..CA.....A.........G.............................G..........A....  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  A  N  P  V  Y  P  Y  L  G  S  Y  D  Y  W  G  Q  G  T  Q  V  T  V  S  S
                    Query_6006   271  CGTATACTACTGTGCGAGAGCCAATCCCGTATACCCCTACCTTGGGAGTTATGACTATTGGGGCCAGGGAACCCAGGTCACCGTCTCCTC  360
V  90.7% (263/290)  IGHV1-46*01  276  ...G..T.............----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-10*01  17   -------------------------------------------........---------------------------------------  24
J  95.1% (39/41)    IGHJ4*02     8    ---------------------------------------------------......C................T...............  46

                                        
                                        
                    Query_6006   361  AG  362
J  95.1% (39/41)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_42172

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           442     2e-126
IGHD1-26*01                                                                                           10.3    136   
IGHJ5*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	GGAGC	ACATCAATGCCTCGGACGGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGAGCACATCAATGCCTCGGACGGGCTGGTGCGACACC	ARDRSTSMPRTGWCDT	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	287	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_6007   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTA  90
V  98.6% (287/291)  IGHV1-46*01  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  M  I  N  P  S  G  G  S  T  N  Y  A  Q
                    Query_6007   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATGATCAACCCTAGTGGTGGTAGCACAAACTACGCACA  180
V  98.6% (287/291)  IGHV1-46*01  96   ......................................................A.........................G.........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  S  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_6007   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTCCATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  98.6% (287/291)  IGHV1-46*01  186  .....................................................A....................................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  D  R  S  T  S  M  P  R  T  G  W  C  D  T  W  G  E  G  T  L  V  T  V  S
                    Query_6007   271  CGTGTATTACTGTGCGAGAGATCGGAGCACATCAATGCCTCGGACGGGCTGGTGCGACACCTGGGGCGAGGGAACCCTGGTCACCGTCTC  360
V  98.6% (287/291)  IGHV1-46*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD1-26*01  10   -----------------------.....--------------------------------------------------------------  14
J  93.5% (43/46)    IGHJ5*02     5    ------------------------------------------------.....T....C........C......................  46

                                          
                                        S 
                    Query_6007   361  CTCA  364
J  93.5% (43/46)    IGHJ5*02     47   ....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_42173

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           406     1e-115
IGHD1-26*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GAGTTCCCCCAGC	GGGAGCTACT	CC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGACAGGAGTTCCCCCAGCGGGAGCTACTCCCTACTACGGTATGGATGTC	TTGVPPAGATPYYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	5	2	0	71.4
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  R  F
                    Query_6008   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGATT  90
V  94.8% (275/290)  IGHV1-69*01  6    ..................G....................................................................C.A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  I  P  I  F  G  T  A  N  Y  A  Q
                    Query_6008   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGCATCATCCCTATCTTTGGTACAGCAAACTACGCACA  180
V  94.8% (275/290)  IGHV1-69*01  96   ....................................................G.G...................................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  L  T  A  V  E  S  T  S  T  A  Y  M  E  L  S  S  L  K  S  E  D  T  A
                    Query_6008   181  GAGGTTCCAGGGCAGAGTCACACTTACCGCGGTCGAGTCCACGAGCACAGCCTACATGGAACTGAGCAGCCTGAAATCTGAGGACACGGC  270
V  94.8% (275/290)  IGHV1-69*01  186  ..A..................GA.........A...A.......................G.............G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  F  Y  C  T  T  G  V  P  P  A  G  A  T  P  Y  Y  G  M  D  V  W  G  Q  G  T  A  V  T  V
                    Query_6008   271  CGTGTTTTACTGTACGACAGGAGTTCCCCCAGCGGGAGCTACTCCCTACTACGGTATGGATGTCTGGGGCCAAGGGACCGCGGTCACCGT  360
V  94.8% (275/290)  IGHV1-69*01  276  .....A.......G...G..----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD1-26*01  9    ---------------------------------..........-----------------------------------------------  18
J  96.2% (50/52)    IGHJ6*02     11   ---------------------------------------------...............C..................A..........  55

                                             
                                        S  S 
                    Query_6008   361  CTCCTCA  367
J  96.2% (50/52)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_42178

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           413     2e-117
IGHD1-1*01                                                                                            10.3    134   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAACG	GGTAACCCCATATCGCGGC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTAT	ARGTGNPISRLGY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_6009   1    GCAGCTGGTGCAGTCTGGGGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTA  90
V  95.5% (277/290)  IGHV1-46*01  6    ....................C.....................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  I  I  N  P  S  A  G  S  T  N  Y  A  Q
                    Query_6009   91   CTATGTGCACTGGGTACGACAGGCCCCTGGACAAGGGCTTGAGTGGTTGGGAATAATCAACCCTAGTGCTGGTAGCACAAATTACGCACA  180
V  95.5% (277/290)  IGHV1-46*01  96   ....A..........G..............................A.....................G...........GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  L  D  L  S  S  L  K  S  D  D  T  A
                    Query_6009   181  GAAATTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACTTGGACCTGAGCAGCCTTAAATCTGACGACACGGC  270
V  95.5% (277/290)  IGHV1-46*01  186  ...G...................................................A....G...........G.G......G........  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  G  T  G  N  P  I  S  R  L  G  Y  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_6009   271  CGTGTATTACTGTGCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  356
V  95.5% (277/290)  IGHV1-46*01  276  ....................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (5/5)     IGHD1-1*01   11   --------------------.....-------------------------------------------------------------  15
J  92.9% (39/42)    IGHJ4*02     7    --------------------------------------------...A...C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_42179

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            367     5e-104
IGHD6-19*01                                                                                           18.0    0.57  
IGHJ4*02                                                                                              54.5    1e-11 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	CAAGG	AGTGCCTGGTAC	GGTGGG	GACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGCAAGGAGTGCCTGGTACGGTGGGGACCAC	AGARSAWYGGDH	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  D  Y  W  M  V  W  V  R  Q  A  P  G  K  G  L  
                    Query_6010   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACTGACTATTGGATGGTCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-7*03   47   ..........................................G.AG..........AG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6010   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (242/249)  IGHV3-7*03   137  ..........................................................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  G  A  R  S  A  W  Y  G  
                    Query_6010   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCCGTGTATTACTGTGCGGGAGCAAGGAGTGCCTGGTACGGTG  270
V  97.2% (242/249)  IGHV3-7*03   227  ........................................G........................A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD6-19*01  10   --------------------------------------------------------------------------....G.......----  21

                                      ------->                                  
                                      G  D  H  W  G  Q  G  A  L  I  T  V  S  S  
                    Query_6010   271  GGGACCACTGGGGCCAGGGAGCCCTAATCACCGTCTCCTCAG  312
J  90.0% (36/40)    IGHJ4*02     9    --...T..............A....GG...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_70312

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*08                                                                                            299     2e-83
IGHD6-13*01                                                                                           19.9    0.16 
IGHJ3*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*08	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGCAC	CAGCAGCTGG	CACCCCAAACCTCG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCGCACCAGCAGCTGGCACCCCAAACCTCGTGATGCTTTTGATGTC	ARDRTSSWHPKPRDAFDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	16	8	0	66.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	218	27	0	89


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  N  I  S  I  S  S  F  C  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6011   1    ACCCTGTCCCTCACCTGCAGTGTTTCTAATATCTCCATCAGTTCTTTCTGCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTGGAG  90
V  89.0% (218/245)  IGHV4-4*08   49   ...................C...C...GG.GG..........AG..A..A.................................A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  F  P  R  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  K  N 
                    Query_6011   91   TGGATTGGGGAAATCTTTCCTAGAGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCACTAGACAAGTCCAAGAAC  180
V  89.0% (218/245)  IGHV4-4*08   139  .........T.T....A.A.C..T....................C..........................CG......C..........  228
                                       W  I  G  Y  I  Y  T  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  D  R  T  S  S  W  H  P  K 
                    Query_6011   181  CAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCGGACACGGCCGTATATTTCTGTGCGAGAGACCGCACCAGCAGCTGGCACCCCAAA  270
V  89.0% (218/245)  IGHV4-4*08   229  .............A.C...G...............A...........G....A............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------------..........---------  18

                                      -------------------->                                  
                                       P  R  D  A  F  D  V  W  G  Q  G  T  M  V  S  V  S  S  
                    Query_6011   271  CCTCGTGATGCTTTTGATGTCTGGGGCCAAGGGACAATGGTCTCCGTCTCTTCAG  325
J  98.0% (49/50)    IGHJ3*01     1    -----.....................................A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_238855

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6012   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_6012   91   CTCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..G...............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G 
                    Query_6012   181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .........................G................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6012   271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_238854

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           439     2e-125
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	73	1	0	98.6
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	112	2	0	98.2
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	287	6	0	98


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  
                    Query_6013   2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCA  91
V  98.0% (287/293)  IGHV5-51*01  2    ..G..............................................................................G...T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_6013   92   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACA  181
V  98.0% (287/293)  IGHV5-51*01  92   G...................................................................................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_6013   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  98.0% (287/293)  IGHV5-51*01  182  .................................C........................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_6013   272  CCGCCATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  361
V  98.0% (287/293)  IGHV5-51*01  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (17/17)   IGHD5-18*01  2    -------------------------------.................------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_6013   362  CCTCAG  367
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_189139

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_6014   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_6014   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_6014   181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_6014   271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_312900

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           327     9e-92
IGHD6-6*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	TC	ATAGCAGTTCGT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACTCATAGCAGTTCGTACTACTATGAGTAC	TTHSSSYYYEY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	231	22	0	91.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  T  W  L  S  W  V  R  Q  D  P  E  K  G  L  
                    Query_6015   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACACCTGGCTGAGCTGGGTCCGCCAGGATCCAGAGAAGGGTCTGG  90
V  91.3% (231/253)  IGHV3-15*01  47   .......T.......................................G.....A..................C.....G......G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      A  W  V  G  R  I  K  S  G  T  H  G  G  T  T  D  Y  P  A  P  V  K  G  R  F  T  V  S  R  D  
                    Query_6015   91   CGTGGGTTGGCCGTATTAAAAGCGGGACTCATGGTGGGACAACAGACTACCCTGCACCCGTGAAAGGCAGATTCACCGTCTCTAGAGATG  180
V  91.3% (231/253)  IGHV3-15*01  137  A......................AAA...G....................G..........................A....A.......  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  D  T  L  Y  L  H  M  N  D  L  K  S  E  D  T  A  V  Y  F  C  T  T  H  S  S  S  Y  
                    Query_6015   181  ATTCAAAAGACACACTGTATCTGCACATGAACGACCTGAAAAGCGAGGACACAGCCGTGTATTTCTGCACCACTCATAGCAGTTCGTACT  270
V  91.3% (231/253)  IGHV3-15*01  227  ........A....G...........A......AG........C....................A...T.....-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  91.7% (11/12)    IGHD6-6*01   5    ---------------------------------------------------------------------------.......C....---  16
J  91.7% (44/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  Y  E  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_6015   271  ACTATGAGTACTGGGGTCAGGGAACCCGGGTCACCGTCTCCTCAG  315
J  91.7% (44/48)    IGHJ4*02     4    ...T...C........C..........T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_312901

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           315     5e-88
IGHD2-21*01                                                                                           14.1    9.2  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCT	CTATTCC	ACATGAATCCGGGGGTTCCCCCGACAGACGGCGATTTCGGTCCCATTAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCTCTATTCCACATGAATCCGGGGGTTCCCCCGACAGACGGCGATTTCGGTCCCATTATTTTGACTAT	AKVSIPHESGGSPDRRRFRSHYFDY	243	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	225	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  A  L  T  W  V  R  Q  A  P  G  T  G  L  
                    Query_6016   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACGTTTAGCAGCTATGCCCTGACCTGGGTCCGCCAGGCTCCAGGGACGGGGTTGG  90
V  90.4% (225/249)  IGHV3-23*01  47   .....................C...............C...............A...G.......................A....C...  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  E  I  S  S  S  S  G  R  K  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6016   91   AATGGGTCTCAGAGATTAGTAGTAGTAGTGGTAGGAAACACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCTA  180
V  90.4% (225/249)  IGHV3-23*01  137  .G..........CT......G.....G.......C.C.T....C............................................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  V  Y  L  Q  K  E  S  L  R  G  E  D  T  A  V  Y  Y  C  A  K  V  S  I  P  H  E  S  
                    Query_6016   181  AGAACACGGTGTATCTGCAAAAGGAAAGCCTGAGAGGCGAGGACACAGCCGTGTACTACTGTGCGAAAGTCTCTATTCCACATGAATCCG  270
V  90.4% (225/249)  IGHV3-23*01  227  ........C............T.A.C..........C.........G.....A..T.............---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD2-21*01  22   ------------------------------------------------------------------------.......-----------  28

                                      -----CDR3-IMGT-------------------------------->                                  
                                      G  G  S  P  D  R  R  R  F  R  S  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6016   271  GGGGTTCCCCCGACAGACGGCGATTTCGGTCCCATTATTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  351
J  97.7% (42/43)    IGHJ4*02     6    --------------------------------------........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_312902

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           319     2e-89
IGHD3-3*01                                                                                            19.9    0.15 
IGHJ6*02                                                                                              108     8e-28


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCG	GATTTTTGGA	CC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGGATTTTTGGACCACTACTTCTACTACGGTATGGACGTC	ARVGFLDHYFYYGMDV	236	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	49	2	0	96.1
CDR2-IMGT	101	121	21	18	3	0	85.7
FR3-IMGT	122	235	114	110	4	0	96.5
CDR3-IMGT (germline)	236	242	7	7	0	0	100
Total	N/A	N/A	228	216	12	0	94.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  V  A  V  S  S  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  I  I  
                    Query_6017   15   GTGCAGCCTCTGGGGTCGCCGTCAGTAGTAACTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAATTATTT  104
V  94.7% (216/228)  IGHV3-53*01  65   ..............T..A..........C..........G...........................................G......  154
                                         A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  

                                      --CDR2-IMGT-----><----------------------------------------------------FR3-IMGT------------
                                      Y  S  D  G  S  T  Y  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  
                    Query_6017   105  ATAGCGATGGTTCCACATACTCCGCAGACTCCGTAAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACCCTGTATCTTCAAA  194
V  94.7% (216/228)  IGHV3-53*01  155  ......G....AG........A............G.........................................G.............  244
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  

                                      ----------------------------------------><-------------------CDR3-IMGT------------------> 
                                      M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  V  G  F  L  D  H  Y  F  Y  Y  G  M  D  V  
                    Query_6017   195  TGAACAGCCTGAGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGTCGGATTTTTGGACCACTACTTCTACTACGGTATGGACGTCT  284
V  94.7% (216/228)  IGHV3-53*01  245  ...............C................................------------------------------------------  292
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                            
D  100.0% (10/10)   IGHD3-3*01   8    ---------------------------------------------------..........-----------------------------  17
J  98.3% (58/59)    IGHJ6*02     4    ---------------------------------------------------------------......A....................  30

                                                                      
                                      W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6017   285  GGGGCCAAGGGACCACGGTCACCGTCTCCTCA  316
J  98.3% (58/59)    IGHJ6*02     31   ................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_222374

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           39.1    3e-07
IGHJ2*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTGCCCATGA	ATTACTATGATAGTAGTGGCTCTTAC	ATTGGGAGCGTTA	GGTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTGCCCATGAATTACTATGATAGTAGTGGCTCTTACATTGGGAGCGTTAGGTGCTTCGATTTC	ARDVPMNYYDSSGSYIGSVRCFDF	238	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_6018   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTTTTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   ........................................G.....AC........C............C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  A  K  N 
                    Query_6018   91   TGGATTGGCTATGTCTATTCCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGCCGAGTCACCTTATCAGTGGACACGGCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G...A......A....................................T.........A.......A......T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------------C
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  V  P  M  N  Y  Y  D  S 
                    Query_6018   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATGTGCCCATGAATTACTATGATAGT  270
V  94.3% (231/245)  IGHV4-59*01  229  .............A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.3% (24/26)    IGHD3-22*01  3    ----------------------------------------------------------------------------..............  16

                                      DR3-IMGT------------------------------>                                  
                                       S  G  S  Y  I  G  S  V  R  C  F  D  F  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6018   271  AGTGGCTCTTACATTGGGAGCGTTAGGTGCTTCGATTTCTGGGGCCGTGGCACCCTGGTCACTGTCTCTTCAG  343
D  92.3% (24/26)    IGHD3-22*01  17   .....T.A....-------------------------------------------------------------  28
J  93.8% (45/48)    IGHJ2*01     6    -------------------------...A.......C...............................C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_222373

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD2-2*01                                                                                            18.0    0.68  
IGHJ5*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATG	GGAAATTGTAGCAGT	GTCATCTGTGATGGGCCT	GACCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGAAATTGTAGCAGTGTCATCTGTGATGGGCCTGACCCC	ARHMGNCSSVICDGPDP	291	341	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	68	3	0	95.8
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	104	10	0	91.2
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	292	271	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  E  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  T  F  G  T  
                    Query_6019   7    TGCAGCTGGTGCAGTCTGAAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTGGCACCT  96
V  92.8% (271/292)  IGHV5-51*01  5    ..................G..................C........................A...............G....AC..G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  R  M  G  I  I  Y  P  G  D  S  E  T  K  Y  S  
                    Query_6019   97   ACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGAGGATGGGGATCATCTATCCTGGTGACTCTGAGACGAAATACAGTC  186
V  92.8% (271/292)  IGHV5-51*01  95   .........G..................................T...............................T..C.G......C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  R  G  Q  D  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  I  S  L  K  A  S  D  T  
                    Query_6019   187  CGTCCTTCCGGGGCCAGGACACCATTTCAGTCGACAAGTCCATAAGTACCGCCTACCTGCAGTGGATCAGCCTGAAGGCCTCGGACACCG  276
V  92.8% (271/292)  IGHV5-51*01  185  .........AA.......T......C....C............C..C...................G.......................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><--------------------CDR3-IMGT-------------------->                         
                                      A  M  Y  Y  C  A  R  H  M  G  N  C  S  S  V  I  C  D  G  P  D  P  W  G  H  G  T  L  V  S  
                    Query_6019   277  CCATGTATTACTGTGCGAGACATATGGGAAATTGTAGCAGTGTCATCTGTGATGGGCCTGACCCCTGGGGCCACGGAACCCTGGTCTCCG  366
V  92.8% (271/292)  IGHV5-51*01  275  ......................--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  86.7% (13/15)    IGHD2-2*01   2    --------------------------...T.......T...-------------------------------------------------  16
J  94.9% (37/39)    IGHJ5*02     12   -----------------------------------------------------------..............G............A...  42

                                              
                                      V  S  S 
                    Query_6019   367  TCTCCTCA  374
J  94.9% (37/39)    IGHJ5*02     43   ........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_119021

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  N  N  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6020   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   .....................C....................G..G.T.....A....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  L  G  S  G  S  S  T  Y  Y  S  D  S  A  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_6020   91   AGTGGGTCTCAGCGATTCTTGGGAGCGGTAGTAGCACATACTACTCAGACTCCGCGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  92.8% (232/250)  IGHV3-23*01  137  .............T...AG...T..T...G..............G.........T............................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_6020   181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  92.8% (232/250)  IGHV3-23*01  227  ...............................G....................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6020   271  ATTCACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_222371

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           366     2e-103
IGHD1-7*01                                                                                            16.1    2.5   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ACTGGAAATAC	ATAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTC	ARDRTGNTYYGLDV	290	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	71	4	0	94.7
CDR1-IMGT	77	100	24	16	8	0	66.7
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	101	13	0	88.6
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	296	265	31	0	89.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S 
                    Query_6021   2    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTATACTTTCAGT  91
V  89.5% (265/296)  IGHV1-18*01  1    .....T.....G.........................A.................................T........C..C..T.CC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  D  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  S  F  N  G  N  T  I  Y 
                    Query_6021   92   AATGATGGTATTAGCTGGGTGCGACAGGCCCCCGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCTCTTTCAATGGAAACACAATCTAC  181
V  89.5% (265/296)  IGHV1-18*01  91   .GCT.......C....................T.......................A.........G...A......T.......A...T  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  L  Q  G  R  V  T  M  T  T  E  T  S  T  T  T  A  Y  M  E  L  R  S  L  T  Y  D  D 
                    Query_6021   182  GCACAGAATTTACAGGGCAGAGTTACCATGACCACAGAAACTTCTACGACCACAGCCTACATGGAGCTGAGGAGCCTGACATATGACGAC  271
V  89.5% (265/296)  IGHV1-18*01  181  ........GC.C...........C..............C..A..C....G.............................G..C.......  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  F  C  A  R  D  R  T  G  N  T  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_6021   272  ACGGCCGTGTATTTCTGTGCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  361
V  89.5% (265/296)  IGHV1-18*01  271  .............A............----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  90.9% (10/11)    IGHD1-7*01   7    ------------------------------.......C...-------------------------------------------------  17
J  95.8% (46/48)    IGHJ6*02     15   ---------------------------------------------......A....C.................................  59

                                         
                                       S 
                    Query_6021   362  TCA  364
J  95.8% (46/48)    IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_119023

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD2-2*02                                                                                            12.2    32    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCA	CTGGTATAC	TTACGTCAGCGGGGGATATG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTGGTATACTTACGTCAGCGGGGGATATGTTGACTAC	ARGHWYTYVSGGYVDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6022   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.2% (243/250)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S 
                    Query_6022   91   CTGGAGTGGATTGGGTGTATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGCTACCATATCAGTAGACACGTCT  180
V  97.2% (243/250)  IGHV4-31*03  139  ................AC................G................................T......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  W  Y  T  Y  V 
                    Query_6022   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCACTGGTATACTTACGTC  270
V  97.2% (243/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (8/9)      IGHD2-2*02   22   --------------------------------------------------------------------------...C.....-------  30

                                      GT------------------>                                  
                                       S  G  G  Y  V  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_6022   271  AGCGGGGGATATGTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCTTCAG  325
J  95.2% (40/42)    IGHJ4*02     7    -------------.............................A.......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_312908

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD3-3*01                                                                                            35.3    4e-06
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCG	ATTACGACTTTTGGAGTGGATATT	CCTTG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCGATTACGACTTTTGGAGTGGATATTCCTTG	AKDRDYDFWSGYSL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  P  F  D  N  Y  V  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6023   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCCGGATTCCCCTTTGACAACTATGTCTTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-23*01  47   .....................C......T......A.....AG..G.....C.A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  I  G  N  G  G  T  T  Y  Y  E  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_6023   91   AGTGGGTCTCGAGTATTATTGGTAATGGTGGTACCACATACTACGAAGACTCCGTGAAGGGCCGGTTCAGCATCTCCAGAGACAATTCCA  180
V  91.2% (228/250)  IGHV3-23*01  137  ..........AGC.....G.....G........G...........C.......................C....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  R  R  L  R  A  E  D  T  A  V  Y  F  C  A  K  D  R  D  Y  D  F  W  
                    Query_6023   181  AGAATACCCTGTATCTGCAAATGAGGAGACTGAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAAAGATCGCGATTACGACTTTTGGA  270
V  91.2% (228/250)  IGHV3-23*01  227  ....C..G................AC..C............................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  91.7% (22/24)    IGHD3-3*01   3    ---------------------------------------------------------------------------.......T.......  17

                                      ------------->                                  
                                      S  G  Y  S  L  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_6023   271  GTGGATATTCCTTGTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  318
D  91.7% (22/24)    IGHD3-3*01   18   ....T....---------------------------------------  26
J  94.1% (32/34)    IGHJ4*02     15   --------------............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_312909

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AACCA	GTACTACTATGATATTAGTGGT	AACCTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAACCAGTACTACTATGATATTAGTGGTAACCTTTTTGACTAC	ARNQYYYDISGNLFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  T  N  Y  Y  W  G  W  V  R  Q  P  P  G  K  G 
                    Query_6024   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGCAATACTAATTACTACTGGGGCTGGGTCCGCCAGCCCCCAGGGAAGGGG  90
V  96.8% (241/249)  IGHV4-39*01  49   .............................T.............G..G..G................A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  T  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_6024   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGACCACCTCCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  96.8% (241/249)  IGHV4-39*01  139  ..................................G.....A.................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  N  Q  Y  Y  Y  D  I 
                    Query_6024   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGCGAGAAACCAGTACTACTATGATATT  270
V  96.8% (241/249)  IGHV4-39*01  229  .....................................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (20/22)    IGHD3-22*01  1    --------------------------------------------------------------------------...T..........G.  16

                                      GT------------------>                                  
                                       S  G  N  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6024   271  AGTGGTAACCTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  90.9% (20/22)    IGHD3-22*01  17   ......-------------------------------------------------  22
J  100.0% (43/43)   IGHJ4*02     6    ------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_154724

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           349     2e-98
IGHD3-9*01                                                                                            14.1    8.5  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGTGCTCCCGTATTGCAGTCTGACT	ACTTGTTATT	N/A	TGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGTGCTCCCGTATTGCAGTCTGACTACTTGTTATTTGGAAGTC	ASVLPYCSLTTCYLEV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6025   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCATCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.1% (235/247)  IGHV3-33*01  47   ....................................C.....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  T  K  R  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6025   91   AGTGGGTGGCAGTTATATGGTATGATGGAACTAAAAGATATTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.1% (235/247)  IGHV3-33*01  137  ..............................G...T.A...C....C............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  T  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  V  L  P  Y  C  S  L  
                    Query_6025   181  GGAACACGCTGTATCTAGAAATGAATAGCCTGAGAGCCGAGGACACGGCTGTCTACTACTGTGCGAGCGTGCTCCCGTATTGCAGTCTGA  270
V  95.1% (235/247)  IGHV3-33*01  227  A...............GC.......C..........................G..T...........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      T------------------>                                 
                                      T  T  C  Y  L  E  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6025   271  CTACTTGTTATTTGGAAGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
D  90.0% (9/10)     IGHD3-9*01   17   --...G......-----------------------------------------  26
J  97.6% (40/41)    IGHJ6*02     22   ------------....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_119028

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           276     3e-76
IGHD5-12*01                                                                                           12.2    31   
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGC	CTACGCTTA	T	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACGCTTATTACGGTATGGACGTC	AREAYAYYGMDV	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	96	18	0	84.2
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	210	34	0	86.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  A  N  H  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_6026   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCGCTAATCACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  86.1% (210/244)  IGHV4-59*01  50   .....TCC...A....C.....................AG..G.T.........G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  I  S  H  S  G  G  T  K  Y  N  R  S  L  K  S  R  V  T  I  T  A  D  K  S  N  N  
                    Query_6026   94   GGATTGCCTATATCTCTCACAGTGGGGGCACCAAGTACAACCGCTCCCTCAAGAGTCGAGTCACCATAACAGCGGACAAGTCCAACAACA  183
V  86.1% (210/244)  IGHV4-59*01  140  ......GG.......A.T........A.......C.......C.........................T...TA....C......G...C  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      K  I  S  L  K  A  R  S  V  T  A  A  D  T  A  V  Y  Y  W  A  R  E  A  Y  A  Y  Y  G  M  D  
                    Query_6026   184  AGATTTCCCTGAAGGCGAGATCTGTGACCGCCGCTGACACGGCCGTATATTATTGGGCCAGAGAGGCCTACGCTTATTACGGTATGGACG  273
V  86.1% (210/244)  IGHV4-59*01  230  ..T.C.........CT...C...........T..G...........G.....C..T..G.....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  88.9% (8/9)      IGHD5-12*01  14   -------------------------------------------------------------------.....A...--------------  22
J  95.8% (46/48)    IGHJ6*02     15   -----------------------------------------------------------------------------.............  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_6026   274  TCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  308
J  95.8% (46/48)    IGHJ6*02     28   ..........A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_119029

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           347     7e-98
IGHD4-17*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGTAGGG	ACGGTGACTAC	GGGGCGGGGCTTGAACAA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCGTAGGGACGGTGACTACGGGGCGGGGCTTGAACAA	ARERRDGDYGAGLEQ	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6027   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTAAGTTCCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-33*01  47   ........................................C...AG.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  W  Y  D  G  I  N  K  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  E  S  
                    Query_6027   91   AGTGGGTGTCAGTTATATGGTATGATGGAATTAATAAATACTATGCAGACGCCGTGAAGGGCCGATTCACCATCTCCAGAGACGAATCCA  180
V  94.4% (236/250)  IGHV3-33*01  137  ........G.....................G...................T................................A.T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  T  M  H  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  R  R  D  G  D  Y  
                    Query_6027   181  GGAACACGATGCATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGCGAGAGAGCGTAGGGACGGTGACTACG  270
V  94.4% (236/250)  IGHV3-33*01  227  A.......C..T......................................G.G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD4-17*01  6    ------------------------------------------------------------------------------...........-  16

                                      ---------------->                                  
                                      G  A  G  L  E  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6027   271  GGGCGGGGCTTGAACAATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (34/34)   IGHJ4*02     15   -----------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_335233

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTAGA	GTAA	ACTATGATACTAGTG	ACGCAGTATG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGTAAACTATGATACTAGTGACGCAGTATGC	TRVNYDTSDAVC	249	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	112	2	0	98.2
CDR3-IMGT (germline)	249	254	6	6	0	0	100
Total	N/A	N/A	254	248	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  F  S  G  S  A  I  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_6028   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCCCCTTCAGTGGCTCTGCTATACACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  97.6% (248/254)  IGHV3-73*01  47   .........A.........................A...................G..................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  N  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_6028   91   AGTGGGTTGGCCGTATTAGAAACAAAGCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATG  180
V  97.6% (248/254)  IGHV3-73*01  137  .....................G....................................................................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------CDR3-IMG
                                      D  S  K  N  T  A  F  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  V  N  Y  D  T  
                    Query_6028   181  ATTCAAAGAACACGGCGTTTCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTATATTACTGTACTAGAGTAAACTATGATACTA  270
V  97.6% (248/254)  IGHV3-73*01  227  ..................A.......................................G...............----------------  300
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  93.3% (14/15)    IGHD3-22*01  6    ------------------------------------------------------------------------------.........G..  17

                                      T------------>                                  
                                      S  D  A  V  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6028   271  GTGACGCAGTATGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  93.3% (14/15)    IGHD3-22*01  18   ...---------------------------------------------  20
J  100.0% (35/35)   IGHJ4*02     14   -------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_222378

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6029   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_6029   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_6029   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6029   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_294459

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           327     9e-92
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAAG	AGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQEWLPGDWYFDL	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  R  N  Y  W  S  W  I  R  Q  P  P  G  E  R  L  E 
                    Query_6030   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCACTAGAAACTACTGGAGCTGGATTCGGCAGCCCCCAGGGGAGAGACTGGAG  90
V  93.0% (226/243)  IGHV4-59*08  49   ...................C...........G........G...TT................C...............A..G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_6030   91   TGGATAGCGTATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  93.0% (226/243)  IGHV4-59*08  139  .....T.G.......T...........AG...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  F  L  P  A  V  Q  E  W  L 
                    Query_6030   181  CAGTTCTCCCTGAAGATGACCTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTG  270
V  93.0% (226/243)  IGHV4-59*08  229  ...............C...G.........................G.................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  10   ----------------------------------------------------------------------------------........  17

                                      ----------------------->                                  
                                       P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_6030   271  CCAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCGTCAG  328
J  96.1% (49/51)    IGHJ2*01     3    -------......................................A.......C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_294458

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           344     6e-97
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGTCGTC	ATTACGATTTTTGGAGTGGTT	TTGACGCCACGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGTCGTCATTACGATTTTTGGAGTGGTTTTGACGCCACGTACTACTTTGACTTC	ARGRHYDFWSGFDATYYFDF	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  H  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6031   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTCACTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*08  49   .............................................T...A........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  D  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_6031   91   TGGATTGGGTATATCGACTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAGAGC  180
V  95.5% (231/242)  IGHV4-59*08  139  ...............T.T...............A..................................A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       H  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  H  Y  D  F  W  S  G 
                    Query_6031   181  CACTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTTTATTACTGTGCGAGGGGTCGTCATTACGATTTTTGGAGTGGT  270
V  95.5% (231/242)  IGHV4-59*08  229  ..G...........G....G...........................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (21/21)   IGHD3-3*01   3    ----------------------------------------------------------------------....................  22

                                      GT------------------------>                                  
                                       F  D  A  T  Y  Y  F  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_6031   271  TTTGACGCCACGTACTACTTTGACTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  331
D  100.0% (21/21)   IGHD3-3*01   23   .------------------------------------------------------------  23
J  95.8% (46/48)    IGHJ4*02     1    -------------............A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_238853

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	274	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_6032   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  95.1% (274/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_6032   91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  95.1% (274/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_6032   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  95.1% (274/288)  IGHV5-51*01  186  ...............G.........................T.........................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6032   271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  95.1% (274/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_150870

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           366     2e-103
IGHD2-2*01                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCT	TTGTACTAGTACCAGTTGCTA	CTCCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCTTTGTACTAGTACCAGTTGCTACTCCTTCTACTCGTACGGTCTGGACGTC	ARELCTSTSCYSFYSYGLDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  I  Y  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6033   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTATATATAGTATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-21*01  47   .............................................GC.....C....A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  T  Y  T  Y  Y  A  D  S  M  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6033   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTACTTATACATACTACGCAGACTCAATGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (242/250)  IGHV3-21*01  137  ..............................G...C.T................G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  L  C  T  S  T  S  
                    Query_6033   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGCTTTGTACTAGTACCAGTT  270
V  96.8% (242/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD2-2*01   7    -------------------------------------------------------------------------.....G.........C.  23

                                      R3-IMGT------------------------>                                 
                                      C  Y  S  F  Y  S  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6033   271  GCTACTCCTTCTACTCGTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  90.5% (19/21)    IGHD2-2*01   24   ....-------------------------------------------------------------  27
J  94.5% (52/55)    IGHJ6*02     8    ----------.....AC......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_294453

Length=410
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     2e-124
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGCCTACTTTCTTAGTTGGGGTTACTCTGGTA	GTATAACAGCAGCTGG	CGAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTAC	ARHAYFLSWGYSGSITAAGEIDY	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	285	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  A  T  Y
                    Query_6034   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTGCCACCTA  90
V  97.9% (285/291)  IGHV5-51*01  6    ....................................C........................................G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_6034   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  97.9% (285/291)  IGHV5-51*01  96   ............................................................................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_6034   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  97.9% (285/291)  IGHV5-51*01  186  .........................................................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        M  Y  Y  C  A  R  H  A  Y  F  L  S  W  G  Y  S  G  S  I  T  A  A  G  E  I  D  Y  W  G  Q
                    Query_6034   271  CATGTATTACTGTGCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTACTGGGGCCA  360
V  97.9% (285/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  93.8% (15/16)    IGHD6-13*01  3    -----------------------------------------------------.....G..........---------------------  18
J  100.0% (42/42)   IGHJ4*02     7    --------------------------------------------------------------------------................  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_6034   361  GGGAACCCTGGTCACCGTCTCCTCAG  386
J  100.0% (42/42)   IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40183344


Query= Query_294452

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           361     4e-102
IGHD3-10*01                                                                                           10.3    114   
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTTTCC	CGGGG	G	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTCCCGGGGGTGCTTATGATATC	ARHFPGGAYDI	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	238	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  F  C  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6035   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTTCTGCAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (238/245)  IGHV4-59*08  49   ...............................G.................A...G....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6035   91   TGGATTGGGTATATCTCTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  97.1% (238/245)  IGHV4-59*08  139  ................A.........................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  H  F  P  G  G  A  Y  D  I 
                    Query_6035   181  CAGTTCTCCCTGAAGCTGACCTCTGTGTCCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATTTTCCCGGGGGTGCTTATGATATC  270
V  97.1% (238/245)  IGHV4-59*08  229  ...................G.......A.....................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-10*01  15   -----------------------------------------------------------------------.....--------------  19
J  97.9% (46/47)    IGHJ3*02     4    -----------------------------------------------------------------------------.....T.......  16

                                                                        
                                       W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6035   271  TGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  304
J  97.9% (46/47)    IGHJ3*02     17   ..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_294450

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           333     1e-93
IGHD3-9*01                                                                                            44.9    5e-09
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	TCTCCGAAGCC	TATTACGATATTATGACTGATTATTATAA	GGGGGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CTCAGAGTCTCCGAAGCCTATTACGATATTATGACTGATTATTATAAGGGGGCTTTTGACTTC	SESPKPITIL*LIIIRGLLTS	242	304	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	29	28	0	1	96.6
CDR1-IMGT	29	52	24	22	2	0	91.7
FR2-IMGT	53	103	51	48	3	0	94.1
CDR2-IMGT	104	127	24	20	4	0	83.3
FR3-IMGT	128	241	114	111	3	0	97.4
CDR3-IMGT (germline)	242	248	7	4	3	0	57.1
Total	N/A	N/A	249	233	15	1	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S   V  Q  P  L  D  S  P  L  V  P  T  G  C  T  G  S  A  K  F  Q  G  R  G  W 
                    Query_6036   1    GGTCCCTGAGACTCTC-TGTGCAGCCTCTGGATTCACCTTTAGTACCTACTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGGCTGG  89
V  93.6% (233/249)  IGHV3-74*01  47   ................C.......................C....G..........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       L  G  S  H  V  S  V  V  M  G  V  R  Q  P  T  R  T  P  *  R  A  D  S  P  S  P  E  T  T  P 
                    Query_6036   90   CTTGGGTCTCACGTATCAGTAGTGATGGGAGTAAGACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  179
V  93.6% (233/249)  IGHV3-74*01  137  TG..............T.A..............GC....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                       R  T  R  S  I  C  K  *  T  V  *  E  T  R  T  R  L  C  I  T  V  S  E  S  P  K  P  I  T  I 
                    Query_6036   180  AGAACACGCTCTATCTGCAAATGAACAGTCTGAGAGACGAGGACACGGCTGTGTATTACTGTCTCAGAGTCTCCGAAGCCTATTACGATA  269
V  93.6% (233/249)  IGHV3-74*01  227  ..........G.........................C.........................GCA....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.1% (27/29)    IGHD3-9*01   2    --------------------------------------------------------------------------------..........  11

                                      DR3-IMGT-------------------------->                                  
                                       L  *  L  I  I  I  R  G  L  L  T  S  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_6036   270  TTATGACTGATTATTATAAGGGGGCTTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  338
D  93.1% (27/29)    IGHD3-9*01   12   ..T......G.........--------------------------------------------------  30
J  97.7% (42/43)    IGHJ4*02     6    --------------------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_294457

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            378     3e-107
IGHD2-21*02                                                                                           14.1    8.5   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TC	GGTGGTAACT	CCATGAGGTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTCGGTGGTAACTCCATGAGGTATGGTATGGACGTC	ARVGGNSMRYGMDV	250	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	135	27	27	0	0	100
FR3-IMGT	136	249	114	110	4	0	96.5
CDR3-IMGT (germline)	250	256	7	7	0	0	100
Total	N/A	N/A	256	249	7	0	97.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R  Q  S  P  S  R  G 
                    Query_6037   1    ACCCTGTCCCTCACCTGCGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGC  90
V  97.3% (249/256)  IGHV6-1*01   49   .....C..A........T........................................................................  138
                                       T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R  Q  S  P  S  R  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R  I  I  I  N  P  D 
                    Query_6037   91   CTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAATCATCAACCCAGAC  180
V  97.3% (249/256)  IGHV6-1*01   139  ............................................................................C.............  228
                                       L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R  I  T  I  N  P  D 

                                      --------FR3-IMGT----------------------------------------------------><----------------CDR3
                                       T  S  K  N  Q  F  S  L  Q  L  K  S  V  T  P  E  D  T  A  A  Y  Y  C  A  R  V  G  G  N  S 
                    Query_6037   181  ACATCCAAGAACCAGTTCTCCCTGCAACTGAAGTCTGTGACTCCCGAGGACACGGCTGCGTATTACTGTGCAAGAGTCGGTGGTAACTCC  270
V  97.3% (249/256)  IGHV6-1*01   229  ..........................G.....C.........................T.................--------------  304
                                       T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A  R                
D  90.0% (9/10)     IGHD2-21*02  11   ------------------------------------------------------------------------------......G...--  20

                                      -IMGT--------------->                                 
                                       M  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6037   271  ATGAGGTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  100.0% (45/45)   IGHJ6*02     18   ---------.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_294456

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_6038   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.9% (279/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_6038   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_6038   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  .......C.....................................C...........G......A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_6038   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.9% (279/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_6038   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_294455

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            353     9e-100
IGHD3-10*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	AATCGGGTGGGC	GGTTCGGGGA	TTTGTGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAATCGGGTGGGCGGTTCGGGGATTTGTGGTAC	VKSGGRFGDLWY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	236	10	0	95.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  L  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6039   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTTCTTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.9% (236/246)  IGHV3-7*03   47   ...................................A.....AG...............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  T  E  K  K  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6039   91   AGTGGGTGGCCAATATAAAGCAAGATGGTACTGAGAAAAAGTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.9% (236/246)  IGHV3-7*03   137  .............C..............A.G.......T.C.................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K  S  G  G  R  F  G  D  
                    Query_6039   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGTGAAATCGGGTGGGCGGTTCGGGGATT  270
V  95.9% (236/246)  IGHV3-7*03   227  ....................................................G..........C..------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD3-10*01  11   ------------------------------------------------------------------------------..........--  20

                                      ------->                                  
                                      L  W  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6039   271  TGTGGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (37/37)   IGHJ4*02     12   -----.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_294454

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            420     7e-120
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	274	5	0	98.2


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_6040  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  98.2% (274/279)  IGHV6-1*01  26   ...........................................................G......G....AG.................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_6040  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.2% (274/279)  IGHV6-1*01  116  ..........................................................................................  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_6040  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.2% (274/279)  IGHV6-1*01  206  ..............A...........................................................................  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------CDR3-IMGT--------->                                  
                                     C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6040  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  98.2% (274/279)  IGHV6-1*01  296  .........---------------------------------------------------------  304
                                     C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02    4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_293104

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            411     4e-117
IGHD3-16*01                                                                                           12.2    34    
IGHJ3*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GCTTCC	TGGGGG	CCATGAGA	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATC	ARGFLGAMRDGLDI	273	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	109	5	0	95.6
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	271	8	0	97.1


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  D  T  W  N  W  
                    Query_6041   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGATACTTGGAACTGGA  90
V  97.1% (271/279)  IGHV6-1*01   26   ...........................................................................C.G............  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_6041   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGGAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  97.1% (271/279)  IGHV6-1*01   116  .....................................A....................................................  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  S  S  K  N  Q  F  S  L  Q  L  N  S  V  T  F  E  D  T  A  V  Y  F  
                    Query_6041   181  GTCGAATAACCATTAACCCAGACTCATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTTTCGAGGACACGGCTGTGTATTTCT  270
V  97.1% (271/279)  IGHV6-1*01   206  .............C.........A.........................................CC....................A..  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------------CDR3-IMGT--------------->                                  
                                      C  A  R  G  F  L  G  A  M  R  D  G  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6041   271  GTGCAAGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  348
V  97.1% (271/279)  IGHV6-1*01   296  .........---------------------------------------------------------------------  304
                                      C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  17   ---------------......---------------------------------------------------------  22
J  95.9% (47/49)    IGHJ3*02     2    -----------------------------....C...T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_159348

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           357     1e-100
IGHD2-21*01                                                                                           10.3    123   
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGGGCTTCCTTCGGTCAG	TTGTG	AAGGGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGGGCTTCCTTCGGTCAGTTGTGAAGGGTTACTTTGACTAC	ARDPGFLRSVVKGYFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  N  F  S  S  Y  G  M  H  W  V  H  Q  A  P  G  K  G  L  
                    Query_6042   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCAACTTCAGCAGCTATGGCATGCACTGGGTCCACCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-30*03  47   .....................C..............C......T......................G.......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  H  K  Y  Y  A  D  S  V  K  G  Q  F  T  I  S  S  D  N  S  
                    Query_6042   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTCATAAATACTATGCAGACTCCGTGAAGGGCCAATTCACCATCTCCAGCGACAATTCCA  180
V  95.6% (239/250)  IGHV3-30*03  137  ................................A..............................G...............A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  M  Y  F  C  A  R  D  P  G  F  L  R  S  
                    Query_6042   181  AGAACACCCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTATGTATTTTTGTGCGAGAGATCCGGGCTTCCTTCGGTCAG  270
V  95.6% (239/250)  IGHV3-30*03  227  .......G..........................................G......AC...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      GT-------------------->                                  
                                      V  V  K  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6042   271  TTGTGAAGGGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (5/5)     IGHD2-21*01  7    .....----------------------------------------------------  11
J  100.0% (46/46)   IGHJ4*02     3    -----------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_293106

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            330     1e-92
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TGGCCGGCG	GTGGCTGG	CT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGCCGGCGGTGGCTGGCTCTTTGACTAT	VAGGGWLFDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	227	16	0	93.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  Q  F  T  S  S  T  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6043   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTCAATTCACCTCTAGTACCTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.4% (227/243)  IGHV3-7*03   47   .....................C.......GG........T.....G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  Q  D  G  S  E  K  I  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6043   91   AGTGGGTGGCCAACATAAACCAAGACGGAAGTGAGAAAATCTACGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.4% (227/243)  IGHV3-7*03   137  ...................G.....T............TA...T..............................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  A  G  G  G  W  L  F  D  
                    Query_6043   181  AGAAGTCACTGTATTTACAAATGAACAGCCTGAGAGCCGACGACACGGCCGTGTATTATTGTGTGGCCGGCGGTGGCTGGCTCTTTGACT  270
V  93.4% (227/243)  IGHV3-7*03   227  ....C.........C.G.......................G.................C....---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (8/8)     IGHD6-19*01  11   ------------------------------------------------------------------------........----------  18
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------........  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6043   271  ATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.7% (43/44)    IGHJ4*02     13   .C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_293107

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-19*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              75.7    5e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCG	GCAGTGGCTGGTAC	GGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCGGCAGTGGCTGGTACGGGATTGACTAC	AKDRGSGWYGIDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_6044   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGCTGGATCCGGCAGACCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   .............................................T.......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_6044   91   TGGATTGGGTATATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ....................C...................................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  D  R  G  S  G  W  Y  G  I 
                    Query_6044   181  CAGTTCTCCCTGAGGCTGAACTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAAAGATCGCGGCAGTGGCTGGTACGGGATT  270
V  96.7% (237/245)  IGHV4-59*01  229  .............A.....G...........................G.............G...-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (14/14)   IGHD6-19*01  8    ----------------------------------------------------------------------..............------  21
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_6044   271  GACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  310
J  97.6% (41/42)    IGHJ4*02     9    ...................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_293101

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           308     4e-86
IGHD2-21*02                                                                                           23.8    0.011
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGGAACTGGA	GGTGGTGACTGC	CTT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGGAACTGGAGGTGGTGACTGCCTTGACCTC	ARAGTGGGDCLDL	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	223	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  G  F  G  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_6045   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGCTTCAGTGGCTTTGGCATGCATTGGGTCCGCCAGGCTCCAGGCAGGGGCCTGG  90
V  89.6% (223/249)  IGHV3-33*01  47   ....................................C.......A...A.........C......................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  R  F  D  G  S  N  T  N  Y  A  A  F  A  K  S  R  F  I  I  S  R  D  N  S  
                    Query_6045   91   AGTGGGTGGCACTTATACGGTTTGATGGGAGTAATACAAATTATGCAGCCTTCGCGAAGAGTCGATTCATCATCTCCAGAGACAATTCCA  180
V  89.6% (223/249)  IGHV3-33*01  137  ...........G.....T...A......A.......A.T.C.......A..C..T....G.C.......C....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  M  D  L  Q  V  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  A  G  T  G  G  G  D  
                    Query_6045   181  AGAACACGATGGATCTGCAGGTGAACAGTCTGAGAGTCGAGGATACGGCTGTGTATTACTGTGCGAGAGCCGGAACTGGAGGTGGTGACT  270
V  89.6% (223/249)  IGHV3-33*01  227  ........C..T.......AA.......C.......C......C.........................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD2-21*02  11   --------------------------------------------------------------------------------..........  20

                                      ---------->                                  
                                      C  L  D  L  W  G  Q  G  T  L  V  T  A  S  S  
                    Query_6045   271  GCCTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGCCTCCTCAG  315
D  100.0% (12/12)   IGHD2-21*02  21   ..-------------------------------------------  22
J  95.0% (38/40)    IGHJ5*02     12   -----....C..........................T........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_293103

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           400     9e-114
IGHD2-21*01                                                                                           18.0    0.69  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCG	ATTGCGGTGGTG	TAGTGATGGAACTTGTTACTCTGGTTCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTAT	ARRLRWCSDGTCYSGSFEY	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	70	4	0	94.6
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	108	6	0	94.7
CDR3-IMGT (germline)	292	296	5	5	0	0	100
Total	N/A	N/A	292	274	18	0	93.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  K  F  T  
                    Query_6046   5    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAAGTTTACCA  94
V  93.8% (274/292)  IGHV5-51*01  2    ....G.....G.......................A........G.....................................GC.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  F  P  R  D  S  D  T  R  Y  
                    Query_6046   95   GCTATTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTCGTGACTCCGATACCAGATATA  184
V  93.8% (274/292)  IGHV5-51*01  92   ....C......................T...........................G.......A....G.......T...........C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  Q  D  Q  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  D  S  L  K  A  S  D  
                    Query_6046   185  ACCCGTCCTTCCAAGACCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTACCTGCAGTGGGACAGCCTGAAGGCCTCGGACA  274
V  93.8% (274/292)  IGHV5-51*01  182  G..............G.......................A............................AG....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  M  Y  Y  C  A  R  R  L  R  W  C  S  D  G  T  C  Y  S  G  S  F  E  Y  W  G  Q  G  T  
                    Query_6046   275  CCGCCATGTATTACTGTGCGAGGCGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTATTGGGGCCAGGGAACCC  364
V  93.8% (274/292)  IGHV5-51*01  272  ......................--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  91.7% (11/12)    IGHD2-21*01  6    -------------------------....T.......-----------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------------------------.....C..C................  30

                                                        
                                      L  V  T  V  S  S  
                    Query_6046   365  TGGTCACCGTCTCCTCAG  382
J  95.3% (41/43)    IGHJ4*02     31   ..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_159341

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           329     3e-92
IGHD2-8*01                                                                                            12.2    31   
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TAATGG	CCCGACTGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGGCCCGACTGAACTACGGCATGGACGTC	ARLMARLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  L  T  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_6047   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCCTCACCAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCCGGGAAGGGACTGGAA  90
V  93.0% (227/244)  IGHV4-59*08  49   ..................A............G....A...GT..................A.............A..............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  R  P  N  N  N  P  S  L  R  S  R  V  T  I  S  V  D  A  S  K  N 
                    Query_6047   91   TGGATTGAGTATATCTATTACAGAGGGCGTCCCAACAACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACGCGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*08  139  .......G...............T...A.CA.....T...............A.........................A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  A  R  L  N  Y  G  M 
                    Query_6047   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACTAATGGCCCGACTGAACTACGGCATG  270
V  93.0% (227/244)  IGHV4-59*08  229  ...................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-8*01   13   ----------------------------------------------------------------......--------------------  18
J  94.0% (47/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_6047   271  GACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCGTCA  309
J  94.0% (47/50)    IGHJ6*02     24   .............A.....................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_159340

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           388     5e-110
IGHD1-26*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGG	TAGTGGG	CAATACAGTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCT	ARGGSGQYSAYFGS	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	70	5	0	93.3
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	104	10	0	91.2
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	294	271	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  I 
                    Query_6048   4    GAGGTCCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCATCTGGATACAGCTTTATC  93
V  92.2% (271/294)  IGHV5-51*01  1    .....G............................A....................A..............GT................C.  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  D  W  I  G  W  V  R  Q  K  P  G  K  G  L  D  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y 
                    Query_6048   94   AGTGACTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGACTGGATGGGGGTCATTTATCCTGGTGACTCTGAAACCAGATAT  183
V  92.2% (271/294)  IGHV5-51*01  91   ..CT........................T..................G.........A....C.................T........C  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  T  Y  L  Q  W  T  S  R  K  A  S  D 
                    Query_6048   184  AGTCCGTCCTTCCAAGGCCAGGTCACCATTTCAGCCGACAAGTCCATCACCACCACCTACCTGCAGTGGACCAGCCGGAAGGCCTCGGAC  273
V  92.2% (271/294)  IGHV5-51*01  181  ..C..........................C...................G....G...............G.....T.............  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  I  Y  F  C  A  R  G  G  S  G  Q  Y  S  A  Y  F  G  S  W  G  Q  G  T  L  V  T  V  S 
                    Query_6048   274  ACCGCCATATACTTCTGTGCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCC  363
V  92.2% (271/294)  IGHV5-51*01  271  ........G..T.A..........------------------------------------------------------------------  294
                                       T  A  M  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD1-26*01  5    -----------------------------.......------------------------------------------------------  11
J  93.6% (44/47)    IGHJ4*02     2    -----------------------------------------------........A..AC..............................  44

                                          
                                       S  
                    Query_6048   364  TCAG  367
J  93.6% (44/47)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_159343

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           329     3e-92
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-10*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAGC	TATTACTATGGTTCGGGG	GCCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAGCTATTACTATGGTTCGGGGGCCCACTTTGACTCC	ARGSYYYGSGAHFDS	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	43	8	0	84.3
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  G  G  Y  *  W  R  W  I  R  Q  P  P  G  K  G 
                    Query_6049   1    ACCCTGTCCCTCACCTGCACTGTTTCTGGTGGCTCCATTAAGAGTGGCGGTTACTAATGGAGGTGGATCCGGCAGCCCCCCGGGAAGGGG  90
V  92.0% (230/250)  IGHV4-31*01  49   .......................C..............C.GC.....T........C.....C........C....A...A........C  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  F  I  Y  Y  S  G  S  P  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 
                    Query_6049   91   CTTGGGTGGATTGGGTTCATCTATTACAGTGGGAGCCCCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACCTCT  180
V  92.0% (230/250)  IGHV4-31*01  139  ..G.A...........A...................A.................................................G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  R  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  Y  Y  Y  G  S 
                    Query_6049   181  AAGAACCGGTTCTCCCTGAAGTTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGAGCTATTACTATGGTTCG  270
V  92.0% (230/250)  IGHV4-31*01  229  .......A.............C...GC...........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (18/18)   IGHD3-10*01  2    ---------------------------------------------------------------------------...............  16

                                      ----------------->                                  
                                       G  A  H  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6049   271  GGGGCCCACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (18/18)   IGHD3-10*01  17   ...-------------------------------------------------  19
J  97.8% (44/45)    IGHJ4*02     4    -------.........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_159342

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD3-10*01                                                                                           12.2    37    
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTCAATT	TGGTTC	CGCAAATGG	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTCAATTTGGTTCCGCAAATGGCTACCAGTACGGCATGGACGTC	ARFQFGSANGYQYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  P  H  Y
                    Query_6050   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTAAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTCCCCACTA  90
V  97.6% (282/289)  IGHV5-51*03  6    ................................................G.................................A..AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  S  P
                    Query_6050   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACAGCCC  180
V  97.6% (282/289)  IGHV5-51*03  96   .................................................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6050   181  GCCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  .T..........................................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  F  Q  F  G  S  A  N  G  Y  Q  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_6050   271  CATGTATTACTGTGCGAGATTTCAATTTGGTTCCGCAAATGGCTACCAGTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  97.6% (282/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-10*01  10   ---------------------------......---------------------------------------------------------  15
J  94.5% (52/55)    IGHJ6*02     8    ------------------------------------------....T.C.....T...................................  55

                                             
                                        S  S 
                    Query_6050   361  CTCCTCA  367
J  94.5% (52/55)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_159345

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           403     1e-114
IGHD2-15*01                                                                                           14.1    9.8   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	G	GCTGCTCCTC	ACGCCGGGGACAAAACCACCGACGACGACAAAG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCTGCTCCTCACGCCGGGGACAAAACCACCGACGACGACAAAGCTTTGACTCC	AGCSSRRGQNHRRRQSFDS	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	272	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  T  S  G  D  T  L  S  R  Y
                    Query_6051   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAAACTTCTGGAGACACCCTCAGTAGATA  90
V  95.1% (272/286)  IGHV1-69*01  6    ..................G............................................GG.........G....T....C..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  L  V  G  P  A  H  Y  A  Q
                    Query_6051   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTCTCGTTGGTCCAGCACACTACGCACA  180
V  95.1% (272/286)  IGHV1-69*01  96   ................................................................A..T.....A.....A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_6051   181  GAACTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAACTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.1% (272/286)  IGHV1-69*01  186  ...G........................................................G.............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        V  Y  Y  C  A  G  C  S  S  R  R  G  Q  N  H  R  R  R  Q  S  F  D  S  W  G  Q  G  P  L  V
                    Query_6051   271  CGTCTATTACTGTGCGGGCTGCTCCTCACGCCGGGGACAAAACCACCGACGACGACAAAGCTTTGACTCCTGGGGCCAGGGACCCCTGGT  360
V  95.1% (272/286)  IGHV1-69*01  276  ...G............--------------------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                           
D  90.0% (9/10)     IGHD2-15*01  21   -----------------......A...---------------------------------------------------------------  30
J  93.2% (41/44)    IGHJ4*02     5    ------------------------------------------------------------........A.............A.......  34

                                                    
                                        T  A  S  S  
                    Query_6051   361  CACCGCCTCCTCAG  374
J  93.2% (41/44)    IGHJ4*02     35   .....T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_159346

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           338     5e-95
IGHD4-17*01                                                                                           12.2    32   
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGAAGAAAG	TACGGT	CA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATGGGAAGAAAGTACGGTCAGATGCTTTTGATATA	VRDGKKVRSDAFDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  G  S  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6052   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTGGTTCCTGGATGCACTGGGTCCGCCAAGCTCCTGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-74*01  47   ...................................A........A.C.A...........................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  G  D  G  S  G  T  N  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6052   91   TGTGGGTCTCACGTATTAATGGTGATGGGAGTGGCACAAACTACGCGGAATCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCC  180
V  93.2% (233/250)  IGHV3-74*01  137  ....................A...........A......G.........C.......................................A  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      P  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  R  D  G  K  K  V  R  S  
                    Query_6052   181  CGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGATGACACGGCTGTATACTACTGTGTCAGAGATGGGAAGAAAGTACGGTCAG  270
V  93.2% (233/250)  IGHV3-74*01  227  A......G................................G...........G..T.......CA.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD4-17*01  5    ---------------------------------------------------------------------------------......---  10
J  95.7% (45/47)    IGHJ3*02     2    -----------------------------------------------------------------------------------------.  2

                                      ------------->                                
                                      D  A  F  D  I  W  G  Q  G  T  M  V  S  V  S  S
                    Query_6052   271  ATGCTTTTGATATATGGGGCCAAGGGACAATGGTCTCCGTCTCTTC  316
J  95.7% (45/47)    IGHJ3*02     3    .............C.....................A..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_151194

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         386     1e-109
IGHD3-16*01                                                                                           12.2    34    
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	ATTATG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATGACTACTTTGACTAC	ARHYDYFDY	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  R  G  F  G  Y  S  F  T  S  F
                    Query_6053     1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGTTTTGGATACAGCTTTACCAGCTT  90
V  92.7% (268/289)  IGHV5-10-1*01  6    ....................C.........................................A.....C....................A  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  F  D  S  S  T  D  Y  T  P
                    Query_6053     91   CTGGATCACTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAGAATTGATCCTTTTGACTCTTCTACCGACTATACGCC  180
V  92.7% (268/289)  IGHV5-10-1*01  96   ........GC.........................................G..G.........AG........A....A....C.GC..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  N  S  I  S  T  A  Y  L  H  L  S  S  L  K  A  S  D  T  G
                    Query_6053     181  GTCATTCCAAGGCCACGTCACCATCTCAGCTGACAACTCCATCAGTACTGCCTACCTGCACTTGAGCAGCCTGAAGGCCTCGGACACCGG  270
V  92.7% (268/289)  IGHV5-10-1*01  186  ...C................................G........C..............G.G..........................C  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------CDR3-IMGT-------->                                  
                                          M  Y  Y  C  A  R  H  Y  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6053     271  CATGTATTACTGTGCGAGACATTATGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  344
V  92.7% (268/289)  IGHV5-10-1*01  276  ...................-------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                        
D  100.0% (6/6)     IGHD3-16*01    3    --------------------......------------------------------------------------  8
J  100.0% (48/48)   IGHJ4*02       1    --------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_37180

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           297     7e-83
IGHD3-10*01                                                                                           10.3    120  
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGG	CGGGG	GCTCGGCCGGGGCC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGCGGGGGCTCGGCCGGGGCCTTTGATATC	AREGGGSAGAFDI	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	101	13	0	88.6
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  S  G  Y  Y  F  W  S  W  V  R  Q  H  P  G  K  G  
                    Query_6054   4    CCCTGAGACTCTCCTGCACTGTCTCAGGTGACTCCATCAGCAGTGGTTATTACTTTTGGAGTTGGGTCCGCCAGCACCCAGGGAAGGGCC  93
V  88.0% (220/250)  IGHV4-31*03  50   .....TCC...A.............T....G................GG.....AC.....C...A........................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  M  H  H  S  G  S  S  F  Y  S  A  S  L  K  S  R  I  A  M  S  V  D  T  S  
                    Query_6054   94   TGGAGTGGATTGGGTACATGCATCACAGTGGAAGCAGCTTCTACAGCGCGTCCCTCAAGAGTCGAATTGCCATGTCAGTGGACACCTCTA  183
V  88.0% (220/250)  IGHV4-31*03  140  ...................CT..T.......G....C..A.....A.C.................G..A....A.....A.....G....  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  Q  F  S  L  K  L  T  G  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  G  S  A  G  
                    Query_6054   184  AGAACCAGTTCTCCCTGAAGCTGACTGGTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGAGGGCGGGGGCTCGGCCGGGG  273
V  88.0% (220/250)  IGHV4-31*03  230  ........................GCTC......T...................................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  15   -------------------------------------------------------------------------.....------------  19

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6054   274  CCTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  318
J  100.0% (43/43)   IGHJ3*02     8    --...........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_37183

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           332     3e-93
IGHD3-22*01                                                                                           46.8    1e-09
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	C	TATTACTATGAAAGTAGTGCTTATTACTAC	GGCAGG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGACTATTACTATGAAAGTAGTGCTTATTACTACGGCAGG	AKDYYYESSAYYYGR	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  G  G  F  R  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6055   1    GGTCCCTGAGACTCTCCTGTGCAGGCGGTGGATTCAGGTTCAGTTCCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-30*18  47   ........................C.TC........CC......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  S  D  G  S  I  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_6055   91   AGTGGGTGGCAGTAATATCATCTGATGGAAGCATTAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATCCCC  180
V  92.4% (231/250)  IGHV3-30*18  137  .............T.......A.........T.A....................................................T..A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      Q  F  T  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  Y  Y  Y  E  S  S  
                    Query_6055   181  AGTTCACGTTGCATTTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCCAAAGACTATTACTATGAAAGTAGTG  270
V  92.4% (231/250)  IGHV3-30*18  227  ..AA....C..T..C.................................................G.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (28/30)    IGHD3-22*01  2    -----------------------------------------------------------------------...........T.......  20

                                      ---------------->                                  
                                      A  Y  Y  Y  G  R  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_6055   271  CTTATTACTACGGCAGGTGGGGCCAGGGAACCCAAGTCACCGTCTCCTCAG  321
D  93.3% (28/30)    IGHD3-22*01  21   G..........----------------------------------------  31
J  94.1% (32/34)    IGHJ4*02     15   -----------------................TG................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_37182

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           349     2e-98
IGHD3-16*02                                                                                           33.4    1e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCAGGCCGG	TTACGTTTGGGGGAGGTTTCGTT	TTTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCAGGCCGGTTACGTTTGGGGGAGGTTTCGTTTTTCCTACGTTGACCAC	ARGQAGYVWGRFRFSYVDH	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  E  S  F  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6056   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGAGTCCTTCAGTGGTTACTACTGGAACTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.5% (234/245)  IGHV4-34*01  49   ...............................G.......................G..................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  R  H  S  G  S  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6056   91   TGGATTGGGGAAATCAGGCATAGTGGAAGCACCTACTACAACGCGTCCCTCAAGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-34*01  139  ................AT...............A........C...............................A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  R  L  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  Q  A  G  Y  V  W  G  R 
                    Query_6056   181  CAGTTCTCCCTGAGGTTGACCTCTGTGAGCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCCAGGCCGGTTACGTTTGGGGGAGG  270
V  95.5% (234/245)  IGHV4-34*01  229  .............A.C...G........C....................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  91.3% (21/23)    IGHD3-16*02  10   --------------------------------------------------------------------------...............T  25

                                      ----------------------->                                  
                                       F  R  F  S  Y  V  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6056   271  TTTCGTTTTTCCTACGTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  91.3% (21/23)    IGHD3-16*02  26   .A.....---------------------------------------------------  32
J  95.7% (45/47)    IGHJ4*02     2    -----------....T.....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_37185

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           333     1e-93
IGHD2-8*01                                                                                            21.8    0.042
IGHJ2*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-8*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAGG	GGATATTGTAC	AAGTTCCCGGTGCTCTATGA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAGGGGATATTGTACAAGTTCCCGGTGCTCTATGAACTTCGATCTC	ARGRGYCTSSRCSMNFDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  D  Y  A  M  N  W  V  R  Q  P  P  G  K  G  L  
                    Query_6057   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTGACTATGCCATGAATTGGGTCCGCCAACCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-21*01  47   ....................................C.......AG....AG......C...........GG..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  R  S  S  I  Y  I  F  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  D  A  
                    Query_6057   91   AGTGGGTCTCATCCATTAGTCGTAGTAGTATTTACATTTTCTACGCAGACTCATTGAAGGGCCGATTCACCATCTCCAGAGACGACGCCA  180
V  92.8% (231/249)  IGHV3-21*01  137  ....................A.........G......A.A.............G.............................A......  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  D  L  Q  M  N  S  L  R  D  E  D  T  A  F  Y  Y  C  A  R  G  R  G  Y  C  T  S  
                    Query_6057   181  AGAACTCACTGGATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTTTCTATTACTGTGCGAGAGGGAGGGGATATTGTACAAGTT  270
V  92.8% (231/249)  IGHV3-21*01  227  ...........T........................C.............G.G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD2-8*01   2    --------------------------------------------------------------------------...........-----  12

                                      IMGT--------------------->                                
                                      S  R  C  S  M  N  F  D  L  W  G  R  G  T  L  V  S  V  S  S
                    Query_6057   271  CCCGGTGCTCTATGAACTTCGATCTCTGGGGCCGTGGCACCCTCGTCTCTGTCTCCTC  328
J  95.3% (41/43)    IGHJ2*01     9    ---------------............................G...A..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_37184

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           321     6e-90
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGTCCCTC	ACGGTGAC	CTAGATT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGACGTCCCTCACGGTGACCTAGATTCC	ARDVPHGDLDS	239	271	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	49	2	0	96.1
CDR2-IMGT	101	124	24	19	5	0	79.2
FR3-IMGT	125	238	114	109	5	0	95.6
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	233	219	14	0	94


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  S  T  F  S  S  F  W  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  R  I 
                    Query_6058   14   TGTGCAGCCTCTGGATCCACCTTCAGTAGCTTCTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGAGTGGGTCTCACGCATT  103
V  94.0% (219/233)  IGHV3-74*01  64   ................T..............A.........................................T............T...  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       T  V  D  G  S  G  T  V  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 
                    Query_6058   104  ACTGTTGATGGCAGTGGCACAGTCTATGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGTTGTATCTG  193
V  94.0% (219/233)  IGHV3-74*01  154  .A.AG......G...A.....AG...C......................................................C........  243
                                       N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------CDR3-IMGT----------->            
                                       Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  V  P  H  G  D  L  D  S  W  G  Q  G 
                    Query_6058   194  CAAATGAACAGTCTGAGAGCCGACGACACGGCTGTGTATTACTGTGCAAGAGACGTCCCTCACGGTGACCTAGATTCCTGGGGCCAGGGA  283
V  94.0% (219/233)  IGHV3-74*01  244  .......................G.............................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (8/8)     IGHD4-17*01  6    -------------------------------------------------------------........---------------------  13
J  100.0% (36/36)   IGHJ5*02     16   ----------------------------------------------------------------------------..............  29

                                                            
                                       T  L  V  T  V  S  S  
                    Query_6058   284  ACCCTGGTCACCGTCTCCTCAG  305
J  100.0% (36/36)   IGHJ5*02     30   ......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_151192

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           294     6e-82
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              48.8    7e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	ACTATGGCAGTAGT	TGGTTCGGTTTG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCACTATGGCAGTAGTTGGTTCGGTTTGGACTCC	ARDHYGSSWFGLDS	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	100	14	0	87.7
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  R  G  S  G  Q  Y  W  T  W  V  R  Q  P  P  G  K  G  
                    Query_6059   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCGTCAGGGGTAGTGGTCAGTACTGGACCTGGGTCCGCCAGCCCCCAGGGAAGGGCC  93
V  87.6% (219/250)  IGHV4-31*02  50   .....TCC...A.......................A....CA..G.....T.C.......G....A.........A..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  T  G  I  T  Y  Y  N  P  S  L  K  S  R  L  V  I  S  V  D  T  S  
                    Query_6059   94   TGGAATGGATTGGTTACATCTATTACACTGGGATCACCTACTACAACCCGTCCCTCAAGAGTCGACTTGTCATCTCAGTCGACACTTCTA  183
V  87.6% (219/250)  IGHV4-31*02  140  ....G........G.............G.....G...............................G..AC...A.....A.....G....  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      N  N  Q  F  F  V  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  H  Y  G  S  S  W  
                    Query_6059   184  ACAACCAGTTTTTTGTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCATTTATTACTGTGCGAGAGATCACTATGGCAGTAGTTGGT  273
V  87.6% (219/250)  IGHV4-31*02  230  .G........C.CCC...A...............................G.G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  85.7% (12/14)    IGHD3-22*01  6    ------------------------------------------------------------------------......AT......----  19

                                      ------------->                                  
                                      F  G  L  D  S  W  G  Q  G  K  L  V  T  V  S  S  
                    Query_6059   274  TCGGTTTGGACTCCTGGGGCCAGGGAAAGCTGGTAACCGTCTCGTCAG  321
J  87.5% (35/40)    IGHJ4*02     9    --------....A..............CC.....C........C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_151193

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           399     3e-113
IGHD3-22*01                                                                                           12.2    37    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACATTTCCTAAT	CTATGA	CAACAGAAATTACCGCCCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACATTTCCTAATCTATGACAACAGAAATTACCGCCCTCTTGACTAC	ARGHFLIYDNRNYRPLDY	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  R  Y 
                    Query_6060   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACAGCTTTTCCCGTTAT  91
V  94.1% (272/289)  IGHV1-18*01  7    .................................................................T..........C....A..A.C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  H 
                    Query_6060   92   GGTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCAGCGCTTACAATGGTAACACAAACTATGCACAT  181
V  94.1% (272/289)  IGHV1-18*01  97   ...A..............................................A......................................G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  E  D  R  V  T  M  T  T  D  T  S  T  T  T  A  Y  M  E  L  R  S  L  T  S  D  D  T  A 
                    Query_6060   182  AAATTCGAGGACAGAGTCACCATGACCACAGACACTTCCACGACCACAGCCTACATGGAACTGAGGAGCCTGACATCTGACGACACGGCC  271
V  94.1% (272/289)  IGHV1-18*01  187  ..GC..C...G........................A.......G...............G.............G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  G  H  F  L  I  Y  D  N  R  N  Y  R  P  L  D  Y  W  G  Q  G  T  L  L  T 
                    Query_6060   272  GTCTATTACTGTGCGAGAGGACATTTCCTAATCTATGACAACAGAAATTACCGCCCTCTTGACTACTGGGGCCAGGGAACCCTGCTCACC  361
V  94.1% (272/289)  IGHV1-18*01  277  ..G................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD3-22*01  7    --------------------------------......----------------------------------------------------  12
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------..........................G.....  38

                                                
                                       V  S  S  
                    Query_6060   362  GTCTCCTCAG  371
J  97.6% (41/42)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_37189

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           10.3    131   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_6061   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  95.2% (276/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  F  A  Q 
                    Query_6061   92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTTTGCACAG  181
V  95.2% (276/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_6061   182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_6061   272  ATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  95.2% (276/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_151198

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           336     1e-94
IGHD1-1*01                                                                                            18.0    0.56 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GTC	TACAACTGG	CGGGAGGGGGCGTTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTCTACAACTGGCGGGAGGGGGCGTTCACTAC	GLQLAGGGVHY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6062   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGCAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.2% (229/243)  IGHV3-33*01  47   ...........................................T.GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  S  S  K  H  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_6062   91   AGTGGGTGGCAATTATATGGTATGATGGAAGTAGCAAACACTATGCAGACTCCGTCCAGGGCCGATTCACCATATCCAGAGACAATTCCA  180
V  94.2% (229/243)  IGHV3-33*01  137  ...........G.....................AT...T................GA................C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  G  L  Q  L  A  G  G  G  V  
                    Query_6062   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCTGTATATTACTGTGGTCTACAACTGGCGGGAGGGGGCGTTC  270
V  94.2% (229/243)  IGHV3-33*01  227  ........C...........................C...G...........G..........---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (9/9)     IGHD1-1*01   3    ------------------------------------------------------------------.........---------------  11

                                      ---->                                  
                                      H  Y  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_6062   271  ACTACAGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.4% (38/39)    IGHJ4*02     10   .....T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_151199

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           349     2e-98
IGHD6-13*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GAATATCT	GGTATAGCAGCAGC	CG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGAATATCTGGTATAGCAGCAGCCGTTGACTAC	AKGISGIAAAVDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  I  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6063   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCATCTATGCCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-23*01  47   .............................................G...........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  G  A  S  G  Y  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6063   91   AGTGGGTCTCAAGTATTGGTGCTAGTGGTTATACCACATACTACGCAGACTCCGTAAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (236/249)  IGHV3-23*01  137  ...........GC....A...G.......GG..G.....................G..................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  I  S  G  I  A  A  
                    Query_6063   181  AGAACACACTGTATCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGGAATATCTGGTATAGCAGCAG  270
V  94.8% (236/249)  IGHV3-23*01  227  .......G.................C...........................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (14/14)   IGHD6-13*01  2    -----------------------------------------------------------------------------.............  14

                                      ---------->                                  
                                      A  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6063   271  CCGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
D  100.0% (14/14)   IGHD6-13*01  15   .--------------------------------------------  15
J  100.0% (42/42)   IGHJ4*02     7    ---..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_129293

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           355     3e-100
IGHD3-9*01                                                                                            18.0    0.63  
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	AGCATATACCTAT	TATTTTGATTGG	N/A	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGAAGCATATACCTATTATTTTGATTGG	AKEAYTYYFDW	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	16	8	0	66.7
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	259	32	0	89


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  K  S  L  R  L  S  C  A  A  S  G  F  A  F  S  H  F
                    Query_6064   1    GCAGCTGGTGCAGTCTGGAGGAGGCGTGGTCCAGCCTGGAAAGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTCACTT  90
V  89.0% (259/291)  IGHV3-30*18  6    ..........G.......G....................G.G..................................A........AG..A  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  M  H  W  V  R  Q  V  P  G  K  G  L  E  W  V  A  V  I  S  H  D  E  A  I  I  Y  Y  G  D
                    Query_6064   91   TGGCATGCACTGGGTCCGCCAGGTCCCAGGCAAGGGCCTGGAGTGGGTGGCAGTTATTTCACATGATGAAGCTATCATATACTATGGCGA  180
V  89.0% (259/291)  IGHV3-30*18  96   .......................CT...........G....................A...T......G.AG..AT.A........CA..  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  R  G  R  F  T  I  S  R  D  N  S  K  N  I  L  Y  L  Q  M  N  G  L  R  T  E  D  T  A
                    Query_6064   181  CTCCGTGAGGGGCCGATTTACCATCTCCAGAGACAATTCCAAGAACATCTTGTATCTGCAGATGAATGGCCTGAGAACTGAGGACACGGC  270
V  89.0% (259/291)  IGHV3-30*18  186  ........A.........C............................CGC..........A.....CA........G.............  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        M  Y  Y  C  A  K  E  A  Y  T  Y  Y  F  D  W  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_6064   271  TATGTATTACTGTGCGAAGGAAGCATATACCTATTATTTTGATTGGTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  350
V  89.0% (259/291)  IGHV3-30*18  276  .G................A..-----------------------------------------------------------  296
                                        V  Y  Y  C  A  K                                                              
D  91.7% (11/12)    IGHD3-9*01   10   ----------------------------------........C...----------------------------------  21
J  97.1% (33/34)    IGHJ4*02     15   ----------------------------------------------................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_129294

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD6-19*01                                                                                           21.8    0.040
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	C	ATAGAAGTGGCTGG	CCGTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACATAGAAGTGGCTGGCCGTTTGATGCTTTCGAGATC	ARHRSGWPFDAFEI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  Y  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_6065   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATTATCACTACTGGAGCTGGATCCGGCAGTCTCCAGGGAAGGGACTGGAG  90
V  93.8% (228/243)  IGHV4-59*01  49   ........................................G.AG.T.......................C.C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  I  Y  N  P  S  L  E  S  R  V  T  I  S  A  D  T  S  K  K 
                    Query_6065   91   TGGATTGGCTATATCTATTACAGTGGGAGCACCATCTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAG  180
V  93.8% (228/243)  IGHV4-59*01  139  ........G.........................A................A.....................T...............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  A  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  R  S  G  W  P  F  D  A 
                    Query_6065   181  CAGTTCTCCCTGAAGCTGAGCGCTGTAACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGACATAGAAGTGGCTGGCCGTTTGATGCT  270
V  93.8% (228/243)  IGHV4-59*01  229  .....................T....G....................G............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  5    ----------------------------------------------------------------....C.........------------  18
J  88.0% (44/50)    IGHJ3*02     1    -----------------------------------------------------------------------------------.......  7

                                      -------->                                  
                                       F  E  I  W  G  Q  G  I  K  V  S  V  S  S  
                    Query_6065   271  TTCGAGATCTGGGGCCAGGGGATAAAGGTCTCCGTCTCTTCAG  313
J  88.0% (44/50)    IGHJ3*02     8    ..T..T...........A....C..T....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_129295

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD3-10*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGCGA	CCGCGGTACGACCAGG	ATGTTCG	AGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGACCGCGGTACGACCAGGATGTTCGAGAATGCTCTTGAGATC	AGDRGTTRMFENALEI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	45	6	0	88.2
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	98	16	0	86
CDR3-IMGT (germline)	241	248	8	6	2	0	75
Total	N/A	N/A	248	215	33	0	86.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  G  V  S  G  G  A  I  S  S  S  H  W  W  N  W  V  R  Q  A  P  G  K  G  L 
                    Query_6066   1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGCGGCGCCATTAGCAGCAGTCACTGGTGGAATTGGGTCCGCCAGGCCCCCGGAAAGGGACTG  90
V  86.7% (215/248)  IGHV4-4*01   49   ...................C.........T...T....C.....T...A.........G.............C....A..G.....G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  Q  I  Y  P  G  G  S  A  N  Y  N  P  S  L  R  S  R  V  A  I  S  L  D  A  S  K 
                    Query_6066   91   GAGTGGATTGGGCAAATCTATCCTGGTGGGAGCGCCAACTACAATCCGTCCCTCAGGAGTCGAGTCGCCATTTCGTTAGACGCGTCCAAG  180
V  86.7% (215/248)  IGHV4-4*01   139  ............G.........A.A........A..........C..........A..........A....A..AG.....AA.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       S  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  G  D  R  G  T  T  R  M  F 
                    Query_6066   181  AGCCAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCTGACACGGCCGTCTATTTTTGTGCGGGCGACCGCGGTACGACCAGGATGTTC  270
V  86.7% (215/248)  IGHV4-4*01   229  .A..............A.C...G...............G...........G....GC......A.A..----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (7/7)     IGHD3-10*02  9    ------------------------------------------------------------------------------------......  14

                                      ----------------->                                  
                                       E  N  A  L  E  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6066   271  GAGAATGCTCTTGAGATCTGGGGTCAAGGGACAATGGTCACCGTTTCCTCAG  322
D  100.0% (7/7)     IGHD3-10*02  15   .---------------------------------------------------  15
J  89.6% (43/48)    IGHJ3*02     3    ----.....T....T........C....................C..T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_129296

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           296     2e-82
IGHD3-10*01                                                                                           12.2    32   
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	CTTGAACAAGTGGACTT	GGGGAG	GGGAGGGTGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAGACTTGAACAAGTGGACTTGGGGAGGGGAGGGTGTTTTTGATATT	AADLNKWTWGGEGVFDI	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	245	8	6	2	0	75
Total	N/A	N/A	245	217	28	0	88.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  A  S  V  T  R  Y  Y  W  N  W  I  R  Q  P  P  G  K  A  L  E 
                    Query_6067   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCGTCACTCGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGCACTGGAG  90
V  88.6% (217/245)  IGHV4-59*02  49   ..................A............G........G.A............G..........................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  Y  Y  S  G  T  T  E  Y  N  P  S  L  N  G  R  V  T  L  S  L  D  T  S  K  N 
                    Query_6067   91   TGGATTGGCTCGATATATTACAGTGGCACTACCGAGTACAATCCCTCCCTCAATGGTCGAGTCACCTTGTCACTTGACACGTCCAAGAAC  180
V  88.6% (217/245)  IGHV4-59*02  139  ........G.AT..C...........G.GC...A.C.....C...........GA...........A.A...G.A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  A  D  L  N  K  W  T  W  G  G 
                    Query_6067   181  CAGTTCTCCCTGAAGCTCACCTCTGTGACCGCTGCGGACACGGCCCTGTATTATTGTGCGGCAGACTTGAACAAGTGGACTTGGGGAGGG  270
V  88.6% (217/245)  IGHV4-59*02  229  .................G.G.........................G.......C......AG...-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-10*01  16   ----------------------------------------------------------------------------------......--  21

                                      ----------------->                                  
                                       E  G  V  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6067   271  GAGGGTGTTTTTGATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  97.7% (43/44)    IGHJ3*02     7    --------.........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_129297

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           294     6e-82
IGHD3-3*02                                                                                            18.0    0.58 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGTCT	CATTTATGGATCGGTTAT	GACCC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGTCTCATTTATGGATCGGTTATGACCCACTTCGACAAC	ARLIYGSVMTHFDN	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	217	29	0	88.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  I  N  N  D  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_6068   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCATCAATAATGATTACTATTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGT  90
V  88.2% (217/246)  IGHV4-39*01  49   ...................C...........G........G..G..G.AG......C................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  N  I  Y  H  N  G  D  T  L  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_6068   91   CTGGAGTGGATCGCCAACATCTATCATAATGGGGACACCCTCTACAATCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACATCC  180
V  88.2% (217/246)  IGHV4-39*01  139  ...........T.GG.GT......T...G....AG....TA......C.............................C........G...  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       T  D  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  I  Y  G  S  V  M 
                    Query_6068   181  ACGGATCAGTTTTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGCGTCTCATTTATGGATCGGTTATG  270
V  88.2% (217/246)  IGHV4-39*01  229  .A.A.C.....C.......A......C.......................................------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  83.3% (15/18)    IGHD3-3*02   8    -----------------------------------------------------------------------.....T....GT......-  25

                                      -------------->                                  
                                       T  H  F  D  N  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_6068   271  ACCCACTTCGACAACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  319
J  93.3% (42/45)    IGHJ4*02     4    ----....T...T........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_129298

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           304     1e-84
IGHD3-3*01                                                                                            12.2    34   
IGHJ3*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGGAGT	CTTGGACCTTGATGACGGTGCCATCCAACAGATCGGTAT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGAGTCTTGGACCTTGATGACGGTGCCATCCAACAGATCGGTATTTTTGATAAG	ARDGVLDLDDGAIQQIGIFDK	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  N  T  Y  G  M  Y  W  I  R  Q  A  P  G  K  G  L  
                    Query_6069   1    GGTCCCTGAGACTCTCCTGTGTAGCATCTGGATTCTCCTTCAATACTTATGGCATGTATTGGATTCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  88.8% (222/250)  IGHV3-33*01  47   .....................C...G.........A......G..GC.........C.C...G.C.........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  W  H  D  G  S  Q  K  F  Y  V  D  S  V  K  D  R  F  T  V  S  R  D  N  S  
                    Query_6069   91   AGTGGGTGGCATCTATATGGCATGATGGAAGTCAGAAATTCTATGTAGACTCTGTGAAGGACCGATTCACCGTCTCCAGAGACAATTCCA  180
V  88.8% (222/250)  IGHV3-33*01  137  ...........GT.......T...........A.T....A.....C......C.......G..........A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      R  N  T  L  Y  L  Q  M  N  I  V  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  V  L  D  L  D  
                    Query_6069   181  GGAACACATTGTATCTGCAAATGAACATAGTGAGAGCCGAAGACACGGCTGTATATTACTGTGCGAGAGATGGAGTCTTGGACCTTGATG  270
V  88.8% (222/250)  IGHV3-33*01  227  A......GC..................GCC..........G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-3*01   14   ----------------------------------------------------------------------......--------------  19

                                      DR3-IMGT-------------------------->                                  
                                      D  G  A  I  Q  Q  I  G  I  F  D  K  C  G  Q  G  T  L  V  T  V  S  S  
                    Query_6069   271  ACGGTGCCATCCAACAGATCGGTATTTTTGATAAGTGTGGCCAAGGGACATTGGTCACCGTCTCTTCAG  339
J  90.9% (40/44)    IGHJ3*02     7    -------------------------........TC..G............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_129299

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         294     6e-82
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAC	TACTATGATAGTAGTGGTT	CGTACTCCGAATC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACTACTATGATAGTAGTGGTTCGTACTCCGAATCTGATGCTTTTGATATC	ARHYYDSSGSYSESDAFDI	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  E  V  S  G  F  T  F  S  S  F  G  F  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6070     1    GGTCCCTGAGACTCTCCTGTGAAGTCTCTGGATTCACCTTCAGTTCTTTTGGTTTCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  87.9% (218/248)  IGHV3-30-3*01  47   .....................C..C...................AGC.A..C.A.G..................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  L  I  S  F  D  G  D  N  R  L  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_6070     91   AGTGGGTGGCTCTTATTTCTTTTGATGGAGACAACAGATTATACGCAGACTCCGTGAAGGGGCGATTCACCGTCTCGAGAGACAATTCCA  180
V  87.9% (218/248)  IGHV3-30-3*01  137  ..........AG....A..A.A.......AG...T.A..AC....................C.........A....C.............  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                        K  N  S  L  Y  L  Q  L  N  S  L  T  A  D  D  T  A  V  Y  Y  C  A  R  H  Y  Y  D  S  S  G  
                    Query_6070     181  AGAACTCGCTCTATCTACAACTGAACAGCCTGACAGCTGACGACACGGCTGTCTATTACTGTGCGAGACACTACTATGATAGTAGTGGTT  270
V  87.9% (218/248)  IGHV3-30-3*01  227  .....A....G.....G...A............G......G...........G...............----------------------  294
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (19/19)   IGHD3-22*01    5    -----------------------------------------------------------------------...................  23

                                        -IMGT----------------------->                                
                                        S  Y  S  E  S  D  A  F  D  I  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6070     271  CGTACTCCGAATCTGATGCTTTTGATATCTGGGGCCAGGGGACACTAGTCACCGTCTCTTC  331
J  93.8% (45/48)    IGHJ3*02       1    -------------........................A......A.G..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_311451

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAATTC	CGGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTCCGGGATGGACGCC	ARGHRVSNGWGTYYNSGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_6071   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTAGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T...........------.........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_6071   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_6071   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  S  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_6071   271  TGGGGAACTTACTATAATTCCGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.3% (42/46)    IGHJ6*02     17   --------------------...T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_311450

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           300     8e-84
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	218	26	0	89.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q  
                    Query_6072   4    CCCTGAGACTCTCCTGCACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAAT  93
V  89.3% (218/244)  IGHV4-59*01  50   .....TCC...A.......T..........................C........C............C.................G.G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N  
                    Query_6072   94   GGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAACC  183
V  89.3% (218/244)  IGHV4-59*01  140  ..A....G.....C...T....T....G......C..............C...........C.C.........A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E  
                    Query_6072   184  AGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAGG  273
V  89.3% (218/244)  IGHV4-59*01  230  ..T.........AG..G.G.............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (12/12)   IGHD4-17*01  1    ----------------------------------------------------------------------------............--  12

                                      ------------->                                  
                                      D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_6072   274  ATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  321
J  92.5% (37/40)    IGHJ4*02     9    --------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_311457

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           403     1e-114
IGHD1-26*01                                                                                           10.3    132   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_6073   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  94.5% (274/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  A  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  F  A  Q 
                    Query_6073   92   GCTATCAGCTGGGCGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTTTGCACAG  181
V  94.5% (274/290)  IGHV1-18*01  97   .G...........T.....................................T......G.G...........A.......C.A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  A  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_6073   182  GGGCTCCAGGGCAGAGTCGCCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.5% (274/290)  IGHV1-18*01  187  AA................A.......................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_6073   272  ATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  94.5% (274/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_311456

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            420     7e-120
IGHD3-3*01                                                                                            19.9    0.18  
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGCCGGTCCTA	TTTTGGAGTG	ATACGAGAGCGGTGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGCCGGTCCTATTTTGGAGTGATACGAGAGCGGTGTTACTTTGACTAC	ARCRSYFGVIRERCYFDY	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  S  T  G  Y
                    Query_6074  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTCCACCGGCTA  90
V  96.5% (279/289)  IGHV1-2*04  6    ..................G.............................................................T.........  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  N  G  D  T  H  Y  A  L
                    Query_6074  91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAATGGTGACACACATTATGCACT  180
V  96.5% (279/289)  IGHV1-2*04  96   ....................................................................G.....G....A.C.......A  185
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       E  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  T  E  L  S  R  L  K  S  D  D  T  A
                    Query_6074  181  GGAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACACGGAGCTGAGCAGGCTGAAATCTGACGACACGGC  270
V  96.5% (279/289)  IGHV1-2*04  186  .A......................................................T.................G...............  275
                                       K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                     ------------><----------------------CDR3-IMGT--------------------->                       
                                       V  Y  Y  C  A  R  C  R  S  Y  F  G  V  I  R  E  R  C  Y  F  D  Y  W  G  Q  G  T  L  V  T
                    Query_6074  271  CGTGTATTACTGTGCGAGATGCCGGTCCTATTTTGGAGTGATACGAGAGCGGTGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCAC  360
V  96.5% (279/289)  IGHV1-2*04  276  ...................-----------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD3-3*01  11   ------------------------------..........--------------------------------------------------  20
J  100.0% (46/46)   IGHJ4*02    3    -------------------------------------------------------...................................  37

                                                
                                       V  S  S  
                    Query_6074  361  CGTCTCCTCAG  371
J  100.0% (46/46)   IGHJ4*02    38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_311455

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           425     3e-121
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAAGCCGAC	TACTGTGGTTCGGGG	GAGTT	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAAGCCGACTACTGTGGTTCGGGGGAGTTGTATGGACGTC	AREKPTTVVRGSCMDV	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	74	1	0	98.7
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	110	4	0	96.5
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	296	284	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  F  T  F  T 
                    Query_6075   2    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTTCACCTTTACC  91
V  95.9% (284/296)  IGHV1-18*01  1    .....T.........................................................................A..........  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  K  T  N  Y 
                    Query_6075   92   ACCTATGGCATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCCCTTACAATGGTAAAACAAACTAT  181
V  95.9% (284/296)  IGHV1-18*01  91   .G......T....G..........................................A.........G.............C.........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       G  Q  K  V  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  T  S  L  G  S  D  D 
                    Query_6075   182  GGACAGAAGGTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGACGAGCCTGGGATCTGACGAC  271
V  95.9% (284/296)  IGHV1-18*01  181  .C.......C............................................................G.......A...........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  E  K  P  T  T  V  V  R  G  S  C  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_6075   272  ACGGCCGTGTATTACTGTGCGAGAGAAAAGCCGACTACTGTGGTTCGGGGGAGTTGTATGGACGTCTGGGGCCAAGGGACCACGGTCACC  361
V  95.9% (284/296)  IGHV1-18*01  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  93.3% (14/15)    IGHD3-10*01  5    -----------------------------------....A..........----------------------------------------  19
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------------...................................  53

                                               
                                       V  S  S 
                    Query_6075   362  GTCTCCTCA  370
J  100.0% (44/44)   IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_311454

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           372     2e-105
IGHD5-12*01                                                                                           23.8    0.012 
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACGCGGG	ATAGTGTCTACGATT	GCCAATTACGGGTTTATCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACGCGGGATAGTGTCTACGATTGCCAATTACGGGTTTATCAACTACTACGGTATGGGCGTC	ARERGIVSTIANYGFINYYGMGV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6076   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACTTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.6% (244/250)  IGHV3-33*01  47   .....................................C....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  F  D  G  S  N  K  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_6076   91   AGTGGGTGGCAGTTATATGGTTTGATGGAAGTAATAAATACTATGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  97.6% (244/250)  IGHV3-33*01  137  .....................A...................................A................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  S  L  Q  I  N  S  L  R  A  E  D  T  A  A  Y  Y  C  A  R  E  R  G  I  V  S  T  
                    Query_6076   181  AGAACACGCTGTCTCTGCAAATAAACAGCCTGAGAGCCGAGGACACGGCTGCGTATTACTGTGCGAGAGAACGCGGGATAGTGTCTACGA  270
V  97.6% (244/250)  IGHV3-33*01  227  ............A.........G............................T..................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD5-12*01  7    -----------------------------------------------------------------------------......G......  19

                                      --CDR3-IMGT----------------------------->                                 
                                      I  A  N  Y  G  F  I  N  Y  Y  G  M  G  V  L  G  Q  G  T  P  V  P  V  S  S 
                    Query_6076   271  TTGCCAATTACGGGTTTATCAACTACTACGGTATGGGCGTCTTGGGCCAAGGGACCCCGGTCCCCGTCTCCTCA  344
D  93.3% (14/15)    IGHD5-12*01  20   ..------------------------------------------------------------------------  21
J  92.5% (49/53)    IGHJ6*02     10   ---------------------...............A.....G.............A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_303825

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           339     2e-95
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCCGTCTCTGA	TTCGGGGAGTTGTTATAAC	TGT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCCGTCTCTGATTCGGGGAGTTGTTATAACTGTCTTTGACTCC	AKPSLIRGVVITVFDS	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6077   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTATGCCATGACGTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-23*01  47   .............................................G...........GC..............T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  D  R  G  R  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6077   91   AGTGGGTCTCCACTATTAGTGACCGTGGTCGTACCACATATTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.9% (232/247)  IGHV3-23*01  137  ..........AG.........GTA.....G...G......C..C..............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  H  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  K  P  S  L  I  R  G  V  
                    Query_6077   181  AGAACACGCTGCATCTGCAAATGAACAGCCTGAGAGCCGGGGACACGGCCGTATATTACTGTGCGAAGCCGTCTCTGATTCGGGGAGTTG  270
V  93.9% (232/247)  IGHV3-23*01  227  ...........T...........................A...........................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.7% (18/19)    IGHD3-10*01  13   ------------------------------------------------------------------------------...........A  24

                                      T------------------>                                  
                                      V  I  T  V  F  D  S  W  G  R  G  T  V  V  S  V  S  S  
                    Query_6077   271  TTATAACTGTCTTTGACTCCTGGGGCCGGGGAACCGTGGTCTCCGTCTCCTCAG  324
D  94.7% (18/19)    IGHD3-10*01  25   .......-----------------------------------------------  31
J  90.9% (40/44)    IGHJ4*02     5    ----------........A........A.......C.....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_303827

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           434     4e-124
IGHD6-13*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTATCGT	TATGGCAGCAGGTGGT	TACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTATCGTTATGGCAGCAGGTGGTTACCACTTTGACTTC	ARLIVMAAGGYHFDF	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	284	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  T  Y
                    Query_6078   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCACCTA  90
V  97.9% (284/290)  IGHV5-51*01  6    .............................................................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  F  D  T  R  Y  S  P
                    Query_6078   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTTTGATACCAGATATAGCCC  180
V  97.9% (284/290)  IGHV5-51*01  96   .......................................................................C............C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6078   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (284/290)  IGHV5-51*01  186  .....................................................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  A  R  L  I  V  M  A  A  G  G  Y  H  F  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6078   271  CATCTATTACTGTGCGAGACTTATCGTTATGGCAGCAGGTGGTTACCACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  97.9% (284/290)  IGHV5-51*01  276  ...G................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  87.5% (14/16)    IGHD6-13*01  4    ---------------------------...A.......C....-----------------------------------------------  19
J  97.8% (44/45)    IGHJ4*02     4    -----------------------------------------------.........A.................................  46

                                        
                                        
                    Query_6078   361  AG  362
J  97.8% (44/45)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_303826

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           402     3e-114
IGHD2-15*01                                                                                           10.3    136   
IGHJ3*01                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	T	CTGCT	TCCGAAGACTTCGGCCCCC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGCTTCCGAAGACTTCGGCCCCCGATGCTTTTGATTTC	ARDLLPKTSAPDAFDF	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	274	17	0	94.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  I  S  C  K  A  S  G  Y  I  F  T  S  Y
                    Query_6079   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCATCTGGATACATCTTCACCAGCTA  90
V  94.2% (274/291)  IGHV1-46*01  6    ..................G.................................G........................C............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  L  S  W  V  R  Q  A  P  E  R  G  L  E  W  M  G  I  I  N  P  S  G  G  I  T  G  Y  A  Q
                    Query_6079   91   CTATCTAAGCTGGGTGCGCCAGGCCCCTGAACGAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTATCACAGGCTACGCACA  180
V  94.2% (274/291)  IGHV1-46*01  96   ....A.GCA.........A..........G..A.........................................G....A..........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  A  M  T  R  D  T  S  T  S  T  V  Y  M  Q  L  N  S  L  R  S  E  D  T  A
                    Query_6079   181  GAAGTTCCAGGGCAGAGTCGCCATGACCAGGGACACGTCCACTAGTACAGTCTACATGCAGCTGAACAGCCTGAGATCTGAGGACACGGC  270
V  94.2% (274/291)  IGHV1-46*01  186  ...................A......................G..C............G......G........................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  D  L  L  P  K  T  S  A  P  D  A  F  D  F  W  G  Q  G  T  L  V  T  V  S
                    Query_6079   271  CGTGTATTACTGTGCGAGAGATCTGCTTCCGAAGACTTCGGCCCCCGATGCTTTTGATTTCTGGGGCCAAGGGACCCTGGTCACCGTCTC  360
V  94.2% (274/291)  IGHV1-46*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD2-15*01  22   ----------------------.....---------------------------------------------------------------  26
J  93.9% (46/49)    IGHJ3*01     2    ----------------------------------------------............G................AA.............  45

                                           
                                        S  
                    Query_6079   361  TTCAG  365
J  93.9% (46/49)    IGHJ3*01     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_218329

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           333     1e-93
IGHD4-17*01                                                                                           19.9    0.14 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAGA	TACGGTGACT	CCAGGGGGTTGTCG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAGATACGGTGACTCCAGGGGGTTGTCGTAC	ARERYGDSRGLSY	230	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	24	0	0	100
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	21	3	0	87.5
FR3-IMGT	116	229	114	111	3	0	97.4
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	219	6	0	97.3


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_6080   13   GTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTACGA  102
V  97.3% (219/225)  IGHV3-33*01  72   .......................................................................................T..  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  R  K  Y  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N
                    Query_6080   103  TGGAAGTAGGAAATACTATGCAGACTCCGTGACGGGCCGATTCACCATCTCCAGAGACGATTCCAAGAACACGCTGTATCTGCAAATGAA  192
V  97.3% (219/225)  IGHV3-33*01  162  ........AT......................A.........................A...............................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------CDR3-IMGT-------------->              
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  R  Y  G  D  S  R  G  L  S  Y  W  G  Q  G  T
                    Query_6080   193  CAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGAGAGATACGGTGACTCCAGGGGGTTGTCGTACTGGGGCCAGGGAAC  282
V  97.3% (219/225)  IGHV3-33*01  252  ...........................G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (10/10)   IGHD4-17*01  5    -------------------------------------------------..........-------------------------------  14
J  100.0% (37/37)   IGHJ4*02     12   -------------------------------------------------------------------------.................  28

                                                          
                                        L  V  T  V  S  S  
                    Query_6080   283  CCTGGTCACCGTCTCCTCAG  302
J  100.0% (37/37)   IGHJ4*02     29   ....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_303820

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           341     5e-96
IGHD2-2*01                                                                                            35.3    4e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	ATTGTACTAGTACCAGGTGCTATG	GGGGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGACATTGTACTAGTACCAGGTGCTATGGGGGATTTGACTTC	TRHCTSTRCYGGFDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  S  L  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6081   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCAGCCTCAGTAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  94.0% (233/248)  IGHV3-64*01  47   .....................C..............C.T.......C......................................A....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  S  D  G  G  T  T  Y  Y  A  N  S  V  K  G  R  F  A  I  S  R  D  N  S  
                    Query_6081   91   AATATGTTTCAGCTATTAGTAGTGATGGGGGTACCACATACTATGCAAACTCTGTGAAGGGCAGATTCGCCATCTCCAGAGACAACTCCA  180
V  94.0% (233/248)  IGHV3-64*01  137  .......................A.........G......T...........................A................T....  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  F  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  T  R  H  C  T  S  T  R  C  
                    Query_6081   181  AGAACACGCTGTTCCTTCAAATGGGAAGCCTGAGAGCTGAGGACATGGCTGTCTATTACTGTACGAGACATTGTACTAGTACCAGGTGCT  270
V  94.0% (233/248)  IGHV3-64*01  227  ............AT...........C..........................G.........G.....----------------------  294
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  91.7% (22/24)    IGHD2-2*01   6    ---------------------------------------------------------------------......G.........C....  26

                                      ---------------->                                  
                                      Y  G  G  F  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_6081   271  ATGGGGGATTTGACTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  321
D  91.7% (22/24)    IGHD2-2*01   27   ...------------------------------------------------  29
J  95.3% (41/43)    IGHJ4*02     6    --------.......A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_303823

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           343     2e-96
IGHD2-2*01                                                                                            12.2    32   
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTCC	TACCAACTACTA	ACGACCTCCTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCTACCAACTACTAACGACCTCCTCCTACGCTATGGACGTC	ARGSYQLLTTSSYAMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  R  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6082   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTCAGGAACTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-48*03  47   .....................C.....................T.GT...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  Y  I  S  T  S  G  S  T  N  Y  N  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6082   91   ATTGGGTTTCATATATTAGTACTAGTGGTAGTACCAACTACAACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (234/249)  IGHV3-48*03  137  .G...........C.......G..............TA...T................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  T  P  E  D  T  A  V  Y  Y  C  A  R  G  S  Y  Q  L  L  T  
                    Query_6082   181  AGAATTCACTGTATTTGCAAATGAACAGCCTGACACCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGGTCCTACCAACTACTAACGA  270
V  94.0% (234/249)  IGHV3-48*03  227  ....C.........C..................G.G.................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  83.3% (10/12)    IGHD2-2*01   16   --------------------------------------------------------------------------.....G..G...----  27

                                      GT-------------------->                                 
                                      T  S  S  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  P  S 
                    Query_6082   271  CCTCCTCCTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCCCCTCA  326
J  95.9% (47/49)    IGHJ6*02     14   -------.....G.....................................T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_303822

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           389     2e-110
IGHD6-13*01                                                                                           14.1    8.3   
IGHJ4*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGAT	CAGCTGG	CACCCGCCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGATCAGCTGGCACCCGCCCTCTACTTTGACTAC	ARVDQLAPALYFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	249	0	0	100


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                     Query_6083   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  100.0% (249/249)  IGHV3-21*01  47   ..........................................................................................  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                     Query_6083   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  100.0% (249/249)  IGHV3-21*01  137  ..........................................................................................  226
                                       E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                       -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  D  Q  L  A  P  A  
                     Query_6083   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGTAGATCAGCTGGCACCCGCCC  270
V  100.0% (249/249)  IGHV3-21*01  227  .....................................................................---------------------  295
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)      IGHD6-13*01  12   --------------------------------------------------------------------------.......---------  18

                                       ------------->                                  
                                       L  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_6083   271  TCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (47/47)    IGHJ4*02     2    -...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_218325

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           352     3e-99
IGHD2-15*01                                                                                           33.4    2e-05
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATGAAA	GATATTGTAGTGAAGGTAGTTGCTAC	CCTACA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTACCCTACATACTTTGACTTC	ARYERYCSEGSCYPTYFDF	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	70	4	0	94.6
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	19	5	0	79.2
FR3-IMGT	178	291	114	98	16	0	86
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	259	34	0	88.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  K  I  S  C  K  T  S  G  Y  S  F  S  
                    Query_6084   5    AGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAAAAGCCCGGGCAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGTTTCAGCA  94
V  88.4% (259/293)  IGHV5-51*01  2    .........................A..................G.......................GG............C..T.C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  S  G  E  G  L  E  W  M  G  I  I  Y  A  G  D  S  D  I  T  Y  
                    Query_6084   95   ACTATTGGATCGGCTGGGTGCGCCAGATGTCCGGTGAAGGCCTGGAGTGGATGGGAATCATCTATGCTGGCGACTCTGACATTACATATA  184
V  88.4% (259/293)  IGHV5-51*01  92   G...C........................C....GA...................G.........C....T........T.CC.G...C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  R  V  T  I  S  V  D  K  A  I  D  T  A  Y  V  Q  W  S  S  L  K  A  S  D  
                    Query_6084   185  GTCCGTCCTTTGAGGGCCGGGTCACCATCTCAGTCGACAAGGCCATCGACACCGCCTACGTACAGTGGAGCAGTCTGAAGGCCTCGGACA  274
V  88.4% (259/293)  IGHV5-51*01  182  .C........CC.A....A..............C.......T.....AG..........C.G...........C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  T  Y  Y  C  A  R  Y  E  R  Y  C  S  E  G  S  C  Y  P  T  Y  F  D  F  W  G  Q  G  T  
                    Query_6084   275  CCGCCACATATTACTGTGCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTACCCTACATACTTTGACTTCTGGGGCCAGGGAACCC  364
V  88.4% (259/293)  IGHV5-51*01  272  ......TG...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  88.5% (23/26)    IGHD2-15*01  3    ------------------------------............GT.....C......----------------------------------  28
J  95.7% (44/46)    IGHJ4*02     3    --------------------------------------------------------------..........A.................  30

                                                        
                                      P  V  T  V  S  S  
                    Query_6084   365  CGGTCACCGTCTCCTCAG  382
J  95.7% (44/46)    IGHJ4*02     31   T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_218324

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           386     1e-109
IGHD3-22*01                                                                                           21.8    0.045 
IGHJ6*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGAG	GTAGCGGTTATTAC	GC	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGAGGTAGCGGTTATTACGCCGTC	ARGGGSGYYAV	290	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	75	0	0	100
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	19	5	0	79.2
FR3-IMGT	176	289	114	101	13	0	88.6
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	271	24	0	91.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T 
                    Query_6085   2    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACATCTTTACT  91
V  91.9% (271/295)  IGHV1-18*01  1    ..................................................................................C......C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  T  H  N  G  K  T  T  Y 
                    Query_6085   92   AACTATGGCATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCGGCACTCACAATGGTAAGACGACATAT  181
V  91.9% (271/295)  IGHV1-18*01  91   .G......T....G..........................................A......A..G..T..........C..A.AC...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  K  D  R  V  T  M  T  T  D  T  S  T  S  T  V  H  L  E  L  R  S  L  R  S  D  D 
                    Query_6085   182  GCACAGAAGTTCAAGGACAGAGTCACCATGACCACAGACACATCAACCAGCACAGTCCACCTGGAGCTGAGGAGCCTGAGATCCGACGAC  271
V  91.9% (271/295)  IGHV1-18*01  181  .........C..C...G...........................C..G.......C.T..A......................T......  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------CDR3-IMGT----------->                                 
                                       T  A  F  Y  Y  C  A  R  G  G  G  S  G  Y  Y  A  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6085   272  ACGGCCTTTTATTACTGTGCGAGAGGAGGAGGTAGCGGTTATTACGCCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  355
V  91.9% (271/295)  IGHV1-18*01  271  ......G.G................-----------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                             
D  92.9% (13/14)    IGHD3-22*01  15   -------------------------------....T.........---------------------------------------  28
J  100.0% (37/37)   IGHJ6*02     26   -----------------------------------------------.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_218327

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           16.1    2.3  
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACAACTTT	GACCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCCC	ARAPPFDYDLDVRGIHNFDP	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_6086   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  94.7% (230/243)  IGHV4-59*01  50   .....TCC...A....C.........................G...............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S  
                    Query_6086   94   GGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAGCC  183
V  94.7% (230/243)  IGHV4-59*01  140  .........A.................G.............................................A.............A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D  
                    Query_6086   184  AGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGACG  273
V  94.7% (230/243)  IGHV4-59*01  230  .................AG...........................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD3-22*01  6    ---------------------------------------------------------------------------........-------  13

                                      T------------------------>                                  
                                      V  R  G  I  H  N  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6086   274  TAAGGGGAATCCACAACTTTGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
J  100.0% (40/40)   IGHJ5*02     12   --------------------........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_303829

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           382     3e-108
IGHD2-2*01                                                                                            43.0    2e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAACTTAGTC	TATTGTAGTAGGACCAGCTGCTATG	TCCCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAACTTAGTCTATTGTAGTAGGACCAGCTGCTATGTCCCATACTTTGCCTAC	ARNLVYCSRTSCYVPYFAY	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	246	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6087   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  99.2% (246/248)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_6087   91   CTGGAGTGGATTGGCTACATCTATTACAGTGGGAGCACCTACTACAATCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  99.2% (246/248)  IGHV4-31*03  139  ..............G................................C..........................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  N  L  V  Y  C  S  R 
                    Query_6087   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGAACTTAGTCTATTGTAGTAGG  270
V  99.2% (246/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  96.0% (24/25)    IGHD2-2*01   5    ------------------------------------------------------------------------------...........T  16

                                      3-IMGT----------------------->                                  
                                       T  S  C  Y  V  P  Y  F  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6087   271  ACCAGCTGCTATGTCCCATACTTTGCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  96.0% (24/25)    IGHD2-2*01   17   .............---------------------------------------------------  29
J  97.8% (45/46)    IGHJ4*02     3    ------------------.......A......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_303828

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           280     1e-77
IGHD5-12*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GTGCGCCCTGGGA	TGGCTAC	ATCCCCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTGCGCCCTGGGATGGCTACATCCCCCCCTTGACTCC	AKCALGWLHPPLDS	232	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	9	18	11	9	1	1	81.8
CDR1-IMGT	19	42	24	18	6	0	75
FR2-IMGT	43	93	51	49	2	0	96.1
CDR2-IMGT	94	117	24	21	3	0	87.5
FR3-IMGT	118	231	114	104	10	0	91.2
CDR3-IMGT (germline)	232	236	5	5	0	0	100
Total	N/A	N/A	229	206	22	1	90


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                        *  S   P  R  F  S  L  S  N  S  G  M  H  W  V  R  Q  A  P  G  R  G  L  E  W  V  A  V  I  
                    Query_6088   9    GTGAAGCC-CTCGATTCAGCCTCAGTAATTCTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAGGGGACTGGAGTGGGTGGCAGTTATCT  97
V  90.0% (206/229)  IGHV3-30*18  65   ...C....T..G......C.T......GC.A................................A...G....................A.  154
                                        C  S  L  W  I  H  L  Q  *  L  W  H  A  L  G  P  P  G  S  R  Q  G  A  G  V  G  G  S  Y  I

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  Y  D  G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_6088   98   CATACGATGGAAGTAACAAATTCTACGCGGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCGAAGAACACACTGTATTTGC  187
V  90.0% (206/229)  IGHV3-30*18  155  ....T...........T....A...T..A........................A................C........G......C...  244
                                        I  *  W  K  *  *  I  L  C  R  L  R  E  G  P  I  H  H  L  Q  R  Q  F  Q  E  H  A  V  S  A

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      Q  M  N  S  L  R  R  E  D  T  A  V  Y  Y  C  A  K  C  A  L  G  W  L  H  P  P  L  D  S  W  
                    Query_6088   188  AAATGAACAGCCTGAGACGCGAGGACACGGCTGTGTATTACTGTGCGAAGTGCGCCCTGGGATGGCTACATCCCCCCCTTGACTCCTGGG  277
V  90.0% (206/229)  IGHV3-30*18  245  .................GCT.............................-----------------------------------------  293
                                        N  E  Q  P  E  S  *  G  H  G  C  V  L  L  C  E                                          
D  100.0% (7/7)     IGHD5-12*01  11   --------------------------------------------------------------.......---------------------  17
J  97.6% (41/42)    IGHJ4*02     7    ------------------------------------------------------------------------------......A.....  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_6088   278  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.6% (41/42)    IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_218323

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_6089   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  98.3% (284/289)  IGHV5-51*03  6    ..............................................................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_6089   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ...................................................G............................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6089   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6089   271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  98.3% (284/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_297373

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           419     2e-119
IGHD2-2*01                                                                                            21.8    0.046 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAGTAGTGAA	TACCAGCTGCT	GTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCC	ARSSSEYQLLFWFDP	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	70	1	0	98.6
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  
                    Query_6090   5    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCAGCT  94
V  96.2% (279/290)  IGHV5-51*03  5    ..................................................................G............C..........  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  
                    Query_6090   95   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATATATCCTGGTGACTCTGATGCCAGATATAGTC  184
V  96.2% (279/290)  IGHV5-51*03  95   ..........................................................C..................A.......C..C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  K  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_6090   185  CGTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTCAAGGCCTCGGACACCG  274
V  96.2% (279/290)  IGHV5-51*03  185  ........C.....................C..........................................G................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------CDR3-IMGT----------------->                               
                                      A  L  Y  Y  C  A  R  S  S  S  E  Y  Q  L  L  F  W  F  D  P  W  G  Q  G  T  L  V  T  V  T  
                    Query_6090   275  CCTTGTATTATTGTGCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCACCT  364
V  96.2% (279/290)  IGHV5-51*03  275  ..A.......C.........----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (11/11)   IGHD2-2*01   16   --------------------------------...........-----------------------------------------------  26
J  97.9% (46/47)    IGHJ5*02     5    ----------------------------------------------........................................T...  48

                                         
                                      S  
                    Query_6090   365  CAG  367
J  97.9% (46/47)    IGHJ5*02     49   ...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_297372

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           269     2e-74
IGHD2-21*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CGCTAT	TATTTTGGTGG	CTTTGGGCC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACGCTATTATTTTGGTGGCTTTGGGCCCTACGGGATGGACGTC	AKRYYFGGFGPYGMDV	234	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	44	24	14	1	9	58.3
FR2-IMGT	45	95	51	47	4	0	92.2
CDR2-IMGT	96	119	24	15	9	0	62.5
FR3-IMGT	120	233	114	101	13	0	88.6
CDR3-IMGT (germline)	234	239	6	6	0	0	100
Total	N/A	N/A	248	212	27	9	85.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F           S  D  A  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6091   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCA---------GCGATGCCATCAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  81
V  85.5% (212/248)  IGHV3-23*01  47   ....................................CCTTTAGCA..T.......G..C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  A  I  S  A  S  G  S  A  R  Y  Y  S  D  S  V  K  G  R  F  T  I  A  R  D  N  S  
                    Query_6091   82   ATTGGGTCTCAGCGATTAGTGCAAGTGGAAGTGCTAGGTACTATTCAGACTCCGTGAAGGGCCGGTTCACCATCGCCAGAGACAATTCCA  171
V  85.5% (212/248)  IGHV3-23*01  137  .G...........T.......GT.....TG..AGC.CA.....CG.............................T...............  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  V  Y  L  Q  I  L  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  R  Y  Y  F  G  G  F  
                    Query_6091   172  AGAATACGGTCTATCTGCAGATATTGAGTTTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAACGCTATTATTTTGGTGGCTTTG  261
V  85.5% (212/248)  IGHV3-23*01  227  ....C...C.G........A..GAAC..CC......................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.9% (10/11)    IGHD2-21*01  5    --------------------------------------------------------------------------....G......-----  15

                                      T------------------>                                 
                                      G  P  Y  G  M  D  V  W  G  H  G  V  T  V  I  V  S  S 
                    Query_6091   262  GGCCCTACGGGATGGACGTCTGGGGCCACGGGGTCACAGTCATCGTATCCTCA  314
J  85.7% (42/49)    IGHJ6*02     14   ----......T.................A...AC...G....C...C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_297371

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         360     1e-101
IGHD3-16*02                                                                                           25.7    0.003 
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGCAGCC	TGGGGGAATTATCGTT	C	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGCAGCCTGGGGGAATTATCGTTCCTTTGACTAC	ARAAWGNYRSFDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  I  S  D  G  S  I  S  G  G  G  F  Y  W  S  W  L  R  Q  P  P  G  K  G 
                    Query_6092     1    ACCCTGTCCCTCACCTGCACTATCTCTGATGGCTCCATCAGCGGTGGTGGTTTCTACTGGAGTTGGCTCCGCCAGCCCCCAGGGAAGGGC  90
V  96.4% (239/248)  IGHV4-30-4*01  49   .....................G......G.............A......A..A.............A.......................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_6092     91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  96.4% (239/248)  IGHV4-30-4*01  139  ..........................................................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  G  Y  F  C  A  R  A  A  W  G  N  Y  R 
                    Query_6092     181  AAGAACCACTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGGGTATTTCTGTGCCAGGGCAGCCTGGGGGAATTATCGT  270
V  96.4% (239/248)  IGHV4-30-4*01  229  ........G...........................................T.....A.........----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  93.8% (15/16)    IGHD3-16*02    17   ---------------------------------------------------------------------------.......G.......  31

                                        ----------->                                  
                                         S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6092     271  TCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  93.8% (15/16)    IGHD3-16*02    32   .---------------------------------------------  32
J  100.0% (44/44)   IGHJ4*02       5    --............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_43228

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            329     3e-92
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCTA	TATTACTATGAAAGTAGTGGTT	CAT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCTATATTACTATGAAAGTAGTGGTTCATACTTCTTTGACTAC	ARSLYYYESSGSYFFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	228	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  D  S  I  S  N  S  R  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_6093   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCATCAGTAATTCTAGGTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  92.7% (228/246)  IGHV4-4*02   49   ...............................G.........C.G.AG..AC...................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  H  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  K  S  K 
                    Query_6093   91   GAGTGGATTGGAGACATCCATCATAGTGGGACCACCAACTACAATCCGTCCCTCAAGAGTCGAGTCACCCTCTCAGTAGACAAGTCCAAG  180
V  92.7% (228/246)  IGHV4-4*02   139  ...........G..A...T............G............C........................A.A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       K  R  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  Y  E  S  S 
                    Query_6093   181  AAGCGGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAAGCCTATATTACTATGAAAGTAGT  270
V  92.7% (228/246)  IGHV4-4*02   229  ..C.A.................G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  95.5% (21/22)    IGHD3-22*01  2    ------------------------------------------------------------------------...........T......  19

                                      -------------------->                                  
                                       G  S  Y  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6093   271  GGTTCATACTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  95.5% (21/22)    IGHD3-22*01  20   ....---------------------------------------------------  23
J  97.9% (47/48)    IGHJ4*02     1    -------...A............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_297376

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           327     9e-92
IGHD1-1*01                                                                                            12.2    34   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCAGGAT	GTACAA	GTGCCAGGTGATCTGCGGATA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAGATCAGGATGTACAAGTGCCAGGTGATCTGCGGATATACTTCTACGGTTTGGACGTC	AADQDVQVPGDLRIYFYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	230	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  A  T  D  L  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_6094   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCGCCACTGATCTTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.6% (230/251)  IGHV4-61*01  49   .......................................AG..G..G.AG........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  L  Y  Y  N  G  V  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  R  D  S  S 
                    Query_6094   91   CTGGAGTGGATTGGATATCTCTATTACAATGGGGTCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAAGAGACTCGTCC  180
V  91.6% (230/251)  IGHV4-61*01  139  ..............G...A.........G....AG...........................................GT....A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  M  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  A  D  Q  D  V  Q  V  P 
                    Query_6094   181  AAGAACCAGTTCTCCCTGAAGATGAACTCTGTGACCGCTGCGGACTCGGCCGTATATTATTGTGCGGCAGATCAGGATGTACAAGTGCCA  270
V  91.6% (230/251)  IGHV4-61*01  229  .....................C...G...................A.......G.....C......AG...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-1*01   2    ------------------------------------------------------------------------------......------  7

                                      CDR3-IMGT-------------------------->                                 
                                       G  D  L  R  I  Y  F  Y  G  L  D  V  W  G  L  G  T  T  V  T  V  S  S 
                    Query_6094   271  GGTGATCTGCGGATATACTTCTACGGTTTGGACGTCTGGGGCCTAGGGACCACGGTCACCGTCTCCTCA  339
J  94.4% (51/54)    IGHJ6*02     9    ---------------....A.......A...............A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_297375

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           330     1e-92
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGCCGG	TGGTTCGGGGAGTTATTA	CAGAGGA	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGCCGGTGGTTCGGGGAGTTATTACAGAGGATTCGACCCC	ARDAGGSGSYYRGFDP	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	231	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6095   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGTTCCATCAGCAGCGGTTCTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  92.0% (231/251)  IGHV4-31*03  49   ................................C...........T...GG............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  P  S  Y  Y  N  P  S  L  R  S  R  L  A  I  S  V  D  T  S 
                    Query_6095   91   CTGGAGTGGATTGGGTACATCCATCACAGTGGGCCCAGCTACTACAACCCGTCCCTCAGGAGTCGACTTGCGATATCAGTAGACACGTCT  180
V  92.0% (231/251)  IGHV4-31*03  139  .....................T..T........AG..C....................A.......G..A.C..................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  E  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  A  G  G  S  G  S 
                    Query_6095   181  AAGAATGAACTCTCCCTGAAGCTGACCTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGAGACGCCGGTGGTTCGGGGAGT  270
V  92.0% (231/251)  IGHV4-31*03  229  .....CC.GT...............G..............................T..............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (18/18)   IGHD3-10*01  10   -----------------------------------------------------------------------------.............  22

                                      GT------------------>                                  
                                       Y  Y  R  G  F  D  P  R  G  Q  G  V  L  V  P  V  S  S  
                    Query_6095   271  TATTACAGAGGATTCGACCCCCGGGGTCAGGGAGTCCTGGTCCCCGTCTCCTCAG  325
D  100.0% (18/18)   IGHD3-10*01  23   .....--------------------------------------------------  27
J  88.4% (38/43)    IGHJ5*02     9    ------------.........T....C......AC.......A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_297374

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            364     5e-103
IGHD3-22*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTG	ATTACTATGATAGTAGTGGTTA	CCCA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTGATTACTATGATAGTAGTGGTTACCCAGACTAC	ASLDYYDSSGYPDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	26	1	0	96.3
FR2-IMGT	57	107	51	51	0	0	100
CDR2-IMGT	108	128	21	21	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  G  S  I  S  S  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_6096   1    GGTCCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATCAGCAGTAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  97.2% (240/247)  IGHV4-4*02   47   ..A.....TCC...A....C............................G.........................................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  
                    Query_6096   91   TGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCA  180
V  97.2% (240/247)  IGHV4-4*02   137  ..........................................................................................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  D  Y  Y  D  S  S  
                    Query_6096   181  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGCCTTGATTACTATGATAGTAGTG  270
V  97.2% (240/247)  IGHV4-4*02   227  ...................................................................-----------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (22/22)   IGHD3-22*01  3    ------------------------------------------------------------------------..................  20

                                      ------------->                                  
                                      G  Y  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6096   271  GTTACCCAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (22/22)   IGHD3-22*01  21   ....--------------------------------------------  24
J  100.0% (40/40)   IGHJ4*02     9    --------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_43223

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6097   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6097   91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_6097   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  95.5% (231/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6097   271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_43222

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           349     2e-98
IGHD6-6*01                                                                                            10.3    123  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTCCGAAAC	CGTCC	GG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTCTCCGAAACCGTCCGGACTACTGCTACCCTAGGGACGTC	TRGLRNRPDYCYPRDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_6098   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGACCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-11*01  47   .........................................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  N  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_6098   91   AGTGGGTTTCATATATCAGTAGTAGTGGTAATTACATCTACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAGCGCCA  180
V  94.8% (236/249)  IGHV3-11*01  137  .............C..T.............G.AC...A..............................................A.....  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  F  L  Q  M  I  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  G  L  R  N  R  P  D  
                    Query_6098   181  AAAACTCACTGTTTCTGCAAATGATCAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTACGAGAGGTCTCCGAAACCGTCCGGACT  270
V  94.8% (236/249)  IGHV3-11*01  227  .G..........A...........A...........................G.........G......---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD6-6*01   14   --------------------------------------------------------------------------------.....-----  18
J  92.9% (52/56)    IGHJ6*02     7    ---------------------------------------------------------------------------------------...  9

                                      T------------------>                                 
                                      Y  C  Y  P  R  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6098   271  ACTGCTACCCTAGGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  92.9% (52/56)    IGHJ6*02     10   ...A....GG..T........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_43221

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           315     5e-88
IGHD1-20*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGAATACAA	GTATAAC	GGAATAGGG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGAATACAAGTATAACGGAATAGGGATGGACGGC	TRSEYKYNGIGMDG	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  E  S  R  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6099   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCGGGGTTCACCGAAAGTAGGAATTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  91.0% (223/245)  IGHV3-53*01  47   ............................T..........TC.....C..C.......G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  M  
                    Query_6099   91   AGTGGGTCTCAGTTATTTATAGTGGTGGTACCACACACTACGCAGATTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCATGA  180
V  91.0% (223/245)  IGHV3-53*01  137  ......................C.......G....T..........C..C...........A.........................A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      T  T  L  F  L  Q  M  N  S  L  R  A  E  D  S  A  V  Y  Y  C  T  R  S  E  Y  K  Y  N  G  I  
                    Query_6099   181  CCACATTGTTTCTTCAAATGAACAGTTTGAGAGCCGAGGACTCGGCCGTGTATTACTGTACGAGATCAGAATACAAGTATAACGGAATAG  270
V  91.0% (223/245)  IGHV3-53*01  227  A...GC...A...............CC..............A.................G.....-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD1-20*01  2    ----------------------------------------------------------------------------.......-------  8

                                      ---------->                                 
                                      G  M  D  G  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6099   271  GGATGGACGGCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  97.6% (41/42)    IGHJ6*02     21   --.......T..................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_297378

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           352     3e-99
IGHD3-10*01                                                                                           16.1    2.1  
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	TCGGAGA	TCGGGGAG	N/A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCATCGGAGATCGGGGAGGATGCTTTTGATATC	ASEIGEDAFDI	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	235	10	0	95.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  T  L  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6100   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAGTCACCCTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  95.9% (235/245)  IGHV3-74*01  47   ................................T.....T...................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  R  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6100   91   TGTGGGTCTCACGCATTAACAGTGATGGGAGTAGAATAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.9% (235/245)  IGHV3-74*01  137  .............T.....T..............C.C..G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  E  I  G  E  D  A  F  
                    Query_6100   181  AGAACACGCTGTATCTTCAAATGAACAGTCTGAGAGTCGAAGACACGGCTGTGTATTACTGTGCATCGGAGATCGGGGAGGATGCTTTTG  270
V  95.9% (235/245)  IGHV3-74*01  227  ................G...................C...G........................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD3-10*01  14   ------------------------------------------------------------------------........----------  21
J  98.0% (48/49)    IGHJ3*02     2    --------------------------------------------------------------------------------..........  11

                                      ---->                                  
                                      D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6100   271  ATATCTGGGGCCAAGGGACAATGGTCACCGTCTCATCAG  309
J  98.0% (48/49)    IGHJ3*02     12   ..................................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_43227

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         322     2e-90
IGHD2-2*01                                                                                            35.3    4e-06
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGGGGAG	TATTGTAGTAGTACCAACTGC	ATG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGGGGAGTATTGTAGTAGTACCAACTGCATGTACGGTCTGGACGTC	ARGGEYCSSTNCMYGLDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  D  I  Y  S  W  N  W  I  R  Q  P  P  G  M  G 
                    Query_6101     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCTCCAGTGATATTTACTCCTGGAACTGGATCCGGCAGCCACCAGGGATGGGC  90
V  91.5% (227/248)  IGHV4-30-2*01  49   .......................................AG.....G.GG...........G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  V  G  H  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  R  S 
                    Query_6101     91   CTGGAGTGGGTTGGCCACATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCCAGAGTCGAGTCACCATCTCAGTTGACAGGTCC  180
V  91.5% (227/248)  IGHV4-30-2*01  139  .........A....GT..................G......................A................A.....A.........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  K  H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  E  Y  C  S  S 
                    Query_6101     181  AAGAAACACTTCTCGTTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGGGGGGGGGAGTATTGTAGTAGT  270
V  91.5% (227/248)  IGHV4-30-2*01  229  .....C..G.....CC...A.....G...........................G..............----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  95.2% (20/21)    IGHD2-2*01     5    ------------------------------------------------------------------------------............  16

                                        -IMGT--------------------->                                 
                                         T  N  C  M  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6101     271  ACCAACTGCATGTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
D  95.2% (20/21)    IGHD2-2*01     17   ....G....---------------------------------------------------  25
J  97.9% (47/48)    IGHJ6*02       15   ------------......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_43224

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           302     3e-84
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGTACCA	N/A	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGTACCAACTGCTACTACCAAATGGACGTC	ARVDCSSTNCYYQMDV	245	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	34	20	20	0	0	100
CDR1-IMGT	35	58	24	19	5	0	79.2
FR2-IMGT	59	109	51	47	4	0	92.2
CDR2-IMGT	110	130	21	17	4	0	81
FR3-IMGT	131	244	114	105	9	0	92.1
CDR3-IMGT (germline)	245	251	7	7	0	0	100
Total	N/A	N/A	237	215	22	0	90.7


Alignments

                                      <-----FR1-IMGT-----><-------CDR1-IMGT------><--------------------FR2-IMGT-----------------
                                         L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E  W  V  
                    Query_6102   15   CCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAGTGGGTTG  104
V  90.7% (215/237)  IGHV4-59*01  56   ......................T..........G.AG.T............................A...A..............A...  145
                                         L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  

                                      ----><-----CDR2-IMGT-----><----------------------------------------------------FR3-IMGT---
                                      G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N  E  F  
                    Query_6102   105  GATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAATGAGTTCT  194
V  90.7% (215/237)  IGHV4-59*01  146  .G...........C..T.....C..C..C.......................A..........................G..CC......  235
                                      G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  

                                      -------------------------------------------------><-------------------CDR3-IMGT-----------
                                      S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  N  C  Y  Y  Q  
                    Query_6102   195  CCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTATTGTGCGAGAGTGGACTGTAGTAGTACCAACTGCTACTACCAAA  284
V  90.7% (215/237)  IGHV4-59*01  236  ........................CT..............G.....C..........---------------------------------  292
                                      S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                                   
D  100.0% (13/13)   IGHD2-2*01   8    --------------------------------------------------------------.............---------------  20
J  87.5% (49/56)    IGHJ6*02     7    ---------------------------------------------------------------------------...A.......GGT.  21

                                      ------->                                 
                                      M  D  V  W  G  L  G  A  T  V  I  V  S  S 
                    Query_6102   285  TGGACGTCTGGGGCCTAGGGGCCACGGTCATCGTCTCCTCA  325
J  87.5% (49/56)    IGHJ6*02     22   ...............A....A.........C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_331701

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            344     6e-97
IGHD3-16*01                                                                                           12.2    30   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAA	ATTACCTTT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATTACCTTTTTTGACTTT	ARQITFFDF	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6103   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACAACCTATTGGATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (234/248)  IGHV3-7*01   47   ..........................................GT.G...........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  K  E  D  G  S  E  K  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6103   91   AGTGGGTGGCCAGCATAAAGGAAGATGGAAGTGAGAAGCACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (234/248)  IGHV3-7*01   137  ............A.......C................AT...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  V  F  L  Q  M  K  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  T  F  F  D  F  
                    Query_6103   181  AGAACTCTGTGTTTCTGCAAATGAAGAGCCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGACAAATTACCTTTTTTGACTTTT  270
V  94.4% (234/248)  IGHV3-7*01   227  .......AC...A............C................................C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD3-16*01  9    -----------------------------------------------------------------------.....G...----------  17
J  93.0% (40/43)    IGHJ4*02     6    --------------------------------------------------------------------------------.......AC.  15

                                                                       
                                      W  G  Q  G  T  L  V  A  V  S  S  
                    Query_6103   271  GGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  303
J  93.0% (40/43)    IGHJ4*02     16   ....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_200579

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHD5-12*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACGCGGGA	TGGCTAC	AATACCTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACGCGGGATGGCTACAATACCTATTGACTGC	ARGRGMATIPIDC	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  T  Y  Y  W  T  W  I  R  R  P  P  G  K  G  L  E 
                    Query_6104   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCGGTACTTACTACTGGACCTGGATCCGGCGGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*01  49   .............................T.........A...G...........G...........A.....................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  T  H  Y  S  G  D  T  N  Y  N  P  S  L  K  S  R  V  I  I  S  G  D  T  S  K  N 
                    Query_6104   91   TGGGTTGGCTATACTCATTACAGTGGGGACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCATCATATCAGGAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*01  139  ...A....G....TCT...........AG...................................C........T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       L  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  G  M  A  T  I  P  I 
                    Query_6104   181  CTGCTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGGACGCGGGATGGCTACAATACCTATT  270
V  92.2% (225/244)  IGHV4-59*01  229  .A.T.........A.......................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-12*01  11   -------------------------------------------------------------------------.......----------  17
J  97.6% (40/41)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                 
                                       D  C  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_6104   271  GACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  309
J  97.6% (40/41)    IGHJ4*02     9    ....A..................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_200578

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_6105   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_6105   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_6105   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  A  A  V  S  V  S  S 
                    Query_6105   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGGCCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  89.6% (43/48)    IGHJ6*02     15   ------------------.....T.......T.............A..A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_100755

Length=318
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           280     9e-78
IGHD6-13*01                                                                                           16.1    2.0  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	230	262	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	21	3	0	87.5
FR3-IMGT	116	229	114	105	9	0	92.1
Total	N/A	N/A	217	198	19	0	91.2


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  L  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  K  W  V  A  V  I  W  Y  D
                    Query_6106   13   GTCTGGACTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGAAATGGGTGGCAGTTATATGGTATGA  102
V  91.2% (198/217)  IGHV3-33*03  72   .......T....C..C.....C.....C....................................G.G.......................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  I  K  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  F  L  Q  M  N
                    Query_6106   103  TGGCATTAAAAAATTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCAAGAACACCCTGTTTCTGCAGATGAA  192
V  91.2% (198/217)  IGHV3-33*03  162  ...A.G...T....A...........................................A.............G....A......A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------CDR3-IMGT----------->                    
                                        S  L  R  A  D  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  D  P  W  G  Q  G  T  L  V
                    Query_6106   193  CAGCCTGAGAGCCGACGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  282
V  91.2% (198/217)  IGHV3-33*03  252  ...............G.........G.G.....C...-----------------------------------------------------  288
                                        S  L  R  A  E  D  T  A  V  Y  Y  C                                                      
D  90.9% (10/11)    IGHD6-13*01  7    ------------------------------------------....G......-------------------------------------  17
J  100.0% (46/46)   IGHJ5*02     6    ----------------------------------------------------------................................  37

                                                    
                                        T  V  S  S  
                    Query_6106   283  CACCGTCTCCTCAG  296
J  100.0% (46/46)   IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30726981


Query= Query_259047

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           291     6e-81
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCACCGGTGG	AGCAATGGCTGG	GGAACATACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCACCGGTGGAGCAATGGCTGGGGAACATACTATAATTACGGTATGGACGCC	ARGHRWSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	21	3	6	70
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	219	23	6	88.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  T  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_6107   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGCCCTTCACTGACAGTGGTTATTATTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.3% (219/248)  IGHV4-34*12  49   .......................C..T......T......------.......C..C....G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  I  P  I  D  T  S 
                    Query_6107   91   CTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAACCCGTCCCTCCAGAGTCGAGTCACCATACCAATAGACACGTCC  180
V  88.3% (219/248)  IGHV4-34*12  133  .....G.............T.......AG.....G......................A.................T..G...........  222
                                       L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       E  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  W  S  N  G 
                    Query_6107   181  GAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGGGGCCACCGGTGGAGCAATGGC  270
V  88.3% (219/248)  IGHV4-34*12  223  A...................GC............C........................C........----------------------  290
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_6107   271  TGGGGAACATACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  93.8% (45/48)    IGHJ6*02     15   ------------------.............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_200574

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            442     2e-126
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	287	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_6108   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  98.6% (287/291)  IGHV1-2*04   6    ..................G.............AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_6108   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.6% (287/291)  IGHV1-2*04   96   ..........................................................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_6108   181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  98.6% (287/291)  IGHV1-2*04   186  ..........................................................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W  G  Q
                    Query_6108   271  CGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGGGGCCA  360
V  98.6% (287/291)  IGHV1-2*04   276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------------------....A...........................  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_6108   361  AGGGACCACGGTCACCGTCTCCTCA  385
J  98.2% (56/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_200577

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           361     4e-102
IGHD2-15*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGC	ATTGTAATGGT	AACAGGTGTTGGGG	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGCATTGTAATGGTAACAGGTGTTGGGGCGTC	ARDRHCNGNRCWGV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	239	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6109   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAACAACTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (239/247)  IGHV3-53*01  47   .............................................G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  I  Y  S  G  G  T  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  
                    Query_6109   91   AGTGGGTCTCACTTATTTATAGCGGTGGTACCACACACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGA  180
V  96.8% (239/247)  IGHV3-53*01  137  ...........G..................G....T...................................................A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  G  G  E  D  T  A  V  Y  Y  C  A  R  D  R  H  C  N  G  N  R  
                    Query_6109   181  ACACGCTGTATCTTCAAATGAACAGCCTGGGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGATAGGCATTGTAATGGTAACAGGT  270
V  96.8% (239/247)  IGHV3-53*01  227  .............................A...C.................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  90.9% (10/11)    IGHD2-15*01  6    ------------------------------------------------------------------------......G....-------  16

                                      ---------->                                 
                                      C  W  G  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6109   271  GTTGGGGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (37/37)   IGHJ6*02     26   -------.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_259044

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-22*01                                                                                           25.7    0.003
IGHJ5*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGGGGCGCGCCC	GTATTACTTTGATAGT	CATAGGCCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCGGGGGCGCGCCCGTATTACTTTGATAGTCATAGGCCTTTCGACTCC	ARAGARPYYFDSHRPFDS	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_6110   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*01  49   ..........................................A....................................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  S  K  N 
                    Query_6110   91   TGGATTGGGTATATGTATTACAGTGGTAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCCTATCAGTAGACACGTCCAAGAAC  180
V  95.9% (234/244)  IGHV4-59*01  139  ..............C...........G.......................................A.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       L  F  P  L  K  L  F  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  A  R  P  Y  Y  F  D 
                    Query_6110   181  CTGTTCCCCCTGAAGCTGTTCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGCGGGGGCGCGCCCGTATTACTTTGAT  270
V  95.9% (234/244)  IGHV4-59*01  229  .A....T...........AG........................................A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.8% (15/16)    IGHD3-22*01  1    -----------------------------------------------------------------------------........A....  13

                                      -------------------->                                  
                                       S  H  R  P  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_6110   271  AGTCATAGGCCTTTCGACTCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  93.8% (15/16)    IGHD3-22*01  14   ...----------------------------------------------------  16
J  95.3% (41/43)    IGHJ5*01     9    ------------.................A...A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_259043

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           336     1e-94
IGHD3-10*01                                                                                           39.1    3e-07
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	G	ACTATGGAACGGGGAGTTATTATAAC	AAGACCC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACTATGGAACGGGGAGTTATTATAACAAGACCCATGGACGTC	AKTMERGVIITRPMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  S  F  S  H  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6111   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCAGCTTCAGTCACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-30*18  47   ........................C...........C.......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  A  Y  D  E  S  F  K  S  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6111   91   AGTGGGTGGCAGTTATAGCATATGATGAAAGTTTTAAATCTTACGCAGCCTCCGTGAAGGGCCGATTTACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-30*18  137  .................T.........G....AA.....AC..T....A..................C......................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  K  T  M  E  R  G  V  I  
                    Query_6111   181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGATGAGGACACGGCTGTGTATTATTGTGCGAAGACTATGGAACGGGGAGTTATTA  270
V  93.5% (231/247)  IGHV3-30*18  227  ...A................................C.....................C........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.3% (24/26)    IGHD3-10*01  6    --------------------------------------------------------------------.......TT.............  27

                                      T------------------>                                 
                                      I  T  R  P  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6111   271  TAACAAGACCCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  323
D  92.3% (24/26)    IGHD3-10*01  28   ....-------------------------------------------------  31
J  97.6% (41/42)    IGHJ6*02     21   -----------......................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_259042

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           391     5e-111
IGHD3-10*01                                                                                           46.8    1e-09 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGCTTCAGAC	TACTATGGTTCGGGGAGTTATTAT	N/A	TACAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGCTTCAGACTACTATGGTTCGGGGAGTTATTATTACATTGACTAC	ARVASDYYGSGSYYYIDY	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	250	0	0	100


Alignments

                                       <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                        T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                     Query_6112   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  100.0% (250/250)  IGHV4-61*01  49   ..........................................................................................  138
                                        T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                       -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                     Query_6112   91   CTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  100.0% (250/250)  IGHV4-61*01  139  ..........................................................................................  228
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                       --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  A  S  D  Y  Y  G 
                     Query_6112   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTTGCTTCAGACTACTATGGT  270
V  100.0% (250/250)  IGHV4-61*01  229  ......................................................................--------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (24/24)    IGHD3-10*01  5    ---------------------------------------------------------------------------------.........  13

                                       -IMGT--------------------->                                  
                                        S  G  S  Y  Y  Y  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_6112   271  TCGGGGAGTTATTATTACATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  100.0% (24/24)    IGHD3-10*01  14   ...............----------------------------------------------  28
J  97.8% (45/46)     IGHJ4*02     3    ---------------...T..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_259041

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            307     1e-85
IGHD1-7*01                                                                                            16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGCGA	CCGA	GGAACTAC	CAGGATGTTCGAGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGACCGAGGAACTACCAGGATGTTCGAGAATGCTCTTGATATC	AGDRGTTRMFENALDI	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	47	4	0	92.2
CDR2-IMGT	108	128	21	21	0	0	100
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                     <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                        S  L  R  L  S  C  G  V  S  G  G  A  I  S  S  S  H  W  W  N  W  V  R  Q  A  P  G  K  G  
                    Query_6113  1    GGTCCCTGAGACTCTCCTGCGGTGTCTCTGGCGGCGCCATCAGCAGCAGTCACTGGTGGAATTGGGTCCGCCAGGCCCCCGGGAAGGGGC  90
V  89.2% (223/250)  IGHV4-4*02  47   ..A.....TCC...A......C.........T...T..........T...A.........G.............C....A..........  136
                                        T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                     ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                     L  E  W  I  G  Q  I  Y  H  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S  
                    Query_6113  91   TGGAGTGGATTGGGCAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAGGAGTCGAGTCAGCATCTCAATAGACACGTCCA  180
V  89.2% (223/250)  IGHV4-4*02  137  ..............G..........................................A...........C...A...G......A.....  226
                                     L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                     -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                     K  H  Q  F  A  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  D  R  G  T  T  R  M  
                    Query_6113  181  AGCACCAGTTCGCCCTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGCGGGCGACCGAGGAACTACCAGGATGT  270
V  89.2% (223/250)  IGHV4-4*02  227  ..A........T........C...G...........................G.....C......A.A..--------------------  296
                                     K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-7*01  10   --------------------------------------------------------------------------........--------  17

                                     T------------------>                                  
                                     F  E  N  A  L  D  I  W  G  Q  G  T  T  V  I  V  S  S  
                    Query_6113  271  TCGAGAATGCTCTTGATATCTGGGGCCAAGGGACAACGGTCATCGTCTCTTCAG  324
J  93.8% (45/48)    IGHJ3*02    3    ------.....T........................T.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_200572

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD3-22*01                                                                                           16.1    2.3   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCAC	ARAPPFDYDLDVRGIHNFDH	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	236	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6114   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (236/244)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_6114   91   TGGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAGC  180
V  96.7% (236/244)  IGHV4-59*01  139  ..........A.................G.............................................A.............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D 
                    Query_6114   181  CAGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGAC  270
V  96.7% (236/244)  IGHV4-59*01  229  ..................AG...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-22*01  6    ----------------------------------------------------------------------------........------  13

                                      GT------------------------>                                  
                                       V  R  G  I  H  N  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6114   271  GTAAGGGGAATCCACAACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  97.8% (44/45)    IGHJ4*02     4    ----------------........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_331702

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           280     1e-77
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AACAG	TCTAC	TACTATGATAGTAGT	ATTTATCAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAACAGTCTACTACTATGATAGTAGTATTTATCACGACTAC	TTVYYYDSSIYHDY	245	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	9	2	0	81.8
CDR1-IMGT	26	49	24	20	4	0	83.3
FR2-IMGT	50	100	51	45	6	0	88.2
CDR2-IMGT	101	130	30	26	4	0	86.7
FR3-IMGT	131	244	114	102	12	0	89.5
CDR3-IMGT (germline)	245	251	7	6	1	0	85.7
Total	N/A	N/A	237	208	29	0	87.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  L  S  F  S  D  A  W  L  S  W  V  R  H  T  P  G  R  G  L  E  W  I  G  R  I  
                    Query_6115   15   GTGCAGTGTCTGGATTATCTTTCAGTGACGCTTGGCTGAGCTGGGTCCGCCACACTCCAGGGAGGGGACTGGAGTGGATTGGCCGTATCA  104
V  87.8% (208/237)  IGHV3-15*01  65   ......CC........CA........A....C...A................GG.........A...G.........G..........T.  154
                                         A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  

                                      -------CDR2-IMGT---------><----------------------------------------------------FR3-IMGT---
                                      K  S  R  T  D  G  G  A  A  E  Y  A  A  P  V  R  G  R  F  T  I  S  R  D  D  S  K  N  T  L  
                    Query_6115   105  AAAGCAGAACTGATGGTGGGGCAGCAGAGTACGCTGCACCCGTGAGAGGCAGATTCACCATCTCAAGAGATGACTCAAAAAACACGCTGT  194
V  87.8% (208/237)  IGHV3-15*01  155  ......A.............A..A....C................A...........................T................  244
                                      K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  

                                      -------------------------------------------------><----------------CDR3-IMGT--------------
                                      Y  L  Q  V  T  S  L  K  T  D  D  P  G  V  Y  Y  C  T  T  V  Y  Y  Y  D  S  S  I  Y  H  D  
                    Query_6115   195  ATTTGCAAGTGACTAGCCTGAAGACCGACGACCCAGGCGTGTATTATTGTACAACAGTCTACTACTATGATAGTAGTATTTATCACGACT  284
V  87.8% (208/237)  IGHV3-15*01  245  ..C.....A...AC........A.....G...A...C.........C.....C....---------------------------------  301
                                      Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                                   
D  100.0% (15/15)   IGHD3-22*01  5    --------------------------------------------------------------...............-------------  19
J  97.5% (39/40)    IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_6115   285  ACTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  320
J  97.5% (39/40)    IGHJ4*02     13   ..................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_141746

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           388     5e-110
IGHD2-15*01                                                                                           14.1    9.8   
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TT	TAGCTGC	GGTGAGTCCGAGTAGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTGCGGTGAGTCCGAGTAGTTTCTACTACGGTTTGGACGTC	ARDLAAVSPSSFYYGLDV	292	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	71	4	0	94.7
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	103	11	0	90.4
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	272	24	0	91.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  Y  G  Y  T  F  S 
                    Query_6116   4    CAGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCTTATGGTTACACCTTTAGC  93
V  91.9% (272/296)  IGHV1-18*04  1    .....T........G......................................................G...C..............C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  D  T  S  Y 
                    Query_6116   94   AGTTACGGTATCACCTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGCTGGATCAGCGGTTATAATGGTGACACAAGCTAT  183
V  91.9% (272/296)  IGHV1-18*04  91   ..C..........G.........A..............A.................A..........C...C......A......A....  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  G  L  R  S  D  G 
                    Query_6116   184  GCACAGATGGTCCGGGACAGAGTCACCATGACCAGGGACACATCCACGAGCACAGTCTACATGGAGGTGAGGGGCCTGAGATCTGACGGC  273
V  91.9% (272/296)  IGHV1-18*04  181  .......A.C...A..G.................CA...................C..........C.....A...............A.  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  R  D  L  A  A  V  S  P  S  S  F  Y  Y  G  L  D  V  W  G  Q  G  T  T 
                    Query_6116   274  ACGGCCGTGTATTACTGTGCGAGAGATTTAGCTGCGGTGAGTCCGAGTAGTTTCTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACG  363
V  91.9% (272/296)  IGHV1-18*04  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD2-15*01  19   ----------------------------.......-------------------------------------------------------  25
J  98.1% (51/52)    IGHJ6*02     11   -----------------------------------------------------..........A..........................  47

                                                     
                                       V  T  V  S  S 
                    Query_6116   364  GTCACCGTCTCCTCA  378
J  98.1% (51/52)    IGHJ6*02     48   ...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_141747

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            410     1e-116
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGTGAGGAACCAGCTCGTATCCGACTTC	ARAVRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  S  Y
                    Query_6117  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCAGCAGTTA  90
V  95.2% (276/290)  IGHV1-8*01  6    ..................G................................................................C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  E
                    Query_6117  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCAGA  180
V  95.2% (276/290)  IGHV1-8*01  96   ........A.........................................................C.....................C.  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  G  D  T  S  I  T  T  A  Y  M  E  M  S  S  L  N  S  E  D  T  A
                    Query_6117  181  GAAGTTCCAGGGCAGAGTCACCATGACCGGGGACACTTCCATAACCACAGCCTACATGGAGATGAGCAGCCTAAACTCTGAAGACACGGC  270
V  95.2% (276/290)  IGHV1-8*01  186  ............................A..A....C.......G................C..........G.GA.....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  V  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6117  271  CGTGTATTACTGTGCGAGAGCGGTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.2% (276/290)  IGHV1-8*01  276  ....................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_100751

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            290     2e-80
IGHD6-19*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCCACGGGCTC	AGCAGTGGC	GATGACCCTGTTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCCACGGGCTCAGCAGTGGCGATGACCCTGTTTATGACTAC	VVHGLSSGDDPVYDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	21	8	0	72.4
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	16	5	0	76.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	214	29	0	88.1


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  R  V  S  G  G  S  I  S  D  S  H  W  W  N  W  V  R  Q  P  P  G  K  G  
                    Query_6118   1    GGTCCCTGAGACTCTCCTGTCGTGTCTCTGGTGGCTCCATCAGCGACAGTCACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  88.1% (214/243)  IGHV4-4*02   47   ..A.....TCC...A....CGC......................AGT...A.........G.............................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  V  F  H  S  G  S  A  K  Y  N  P  S  L  Q  S  R  L  T  M  S  L  D  K  S  
                    Query_6118   91   TGGAGTGGATTGGGGAAGTTTTTCACAGTGGGAGCGCCAAGTACAACCCGTCCCTTCAGAGTCGACTCACCATGTCACTAGACAAGTCTA  180
V  88.1% (214/243)  IGHV4-4*02   137  .................A.C.A...T.........A....C..............CA........G.......A...G..........C.  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  Q  F  S  L  K  L  Q  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  H  G  L  S  S  G  D  
                    Query_6118   181  GGAACCAGTTCTCCCTGAAGCTGCAGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGTGGTCCACGGGCTCAGCAGTGGCGATG  270
V  88.1% (214/243)  IGHV4-4*02   227  A......................AGC.....................................---------------------------  289
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                             
D  100.0% (9/9)     IGHD6-19*01  7    -----------------------------------------------------------------------------.........----  15

                                      ---------------->                                  
                                      D  P  V  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6118   271  ACCCTGTTTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (41/41)   IGHJ4*02     8    ----------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_100752

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           427     1e-121
IGHD2-2*01                                                                                            18.0    0.66  
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAGTAGGGAATT	CCAGCTGCT	GTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTAGTAGGGAATTCCAGCTGCTGTTCTGGTTCGACCCC	ARSSREFQLLFWFDP	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	73	1	0	98.6
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	283	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_6119   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCA  91
V  96.6% (283/293)  IGHV5-51*03  2    .....................................................................G............C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  
                    Query_6119   92   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATATATCCTGGTGACTCTGATGCCAGATATA  181
V  96.6% (283/293)  IGHV5-51*03  92   .............................................................C..................A.......C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  K  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_6119   182  GTCCGTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTCAAGGCCTCGGACA  271
V  96.6% (283/293)  IGHV5-51*03  182  .C.........C.....................C..........................................G.............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  Y  C  A  R  S  S  R  E  F  Q  L  L  F  W  F  D  P  W  G  Q  G  T  L  V  T  V  
                    Query_6119   272  CCGCCATGTATTATTGTGCGAGAAGTAGTAGGGAATTCCAGCTGCTGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCA  361
V  96.6% (283/293)  IGHV5-51*03  272  .............C.........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (9/9)     IGHD2-2*01   18   -------------------------------------.........--------------------------------------------  26
J  97.9% (46/47)    IGHJ5*02     5    -------------------------------------------------........................................T  45

                                            
                                      T  S  
                    Query_6119   362  CCTCAG  367
J  97.9% (46/47)    IGHJ5*02     46   ......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_154721

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           304     1e-84
IGHD2-15*01                                                                                           12.2    33   
IGHJ1*01                                                                                              27.6    0.002


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGAATCCCCCGATC	GGTGGT	TCCGCCTCTTACCTAACCTCGACGTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGAATCCCCCGATCGGTGGTTCCGCCTCTTACCTAACCTCGACGTT	ARDESPDRWFRLLPNLDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  T  M  T  W  V  R  L  A  P  R  K  G  L  
                    Query_6120   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTTCCTATACCATGACCTGGGTCCGCCTGGCTCCACGGAAGGGGCTGG  90
V  88.8% (222/250)  IGHV3-21*01  47   .....................................C......AG.....G.....A...........A.......G............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  K  T  T  T  Y  E  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6120   91   AGTGGGTTTCATCTATTAGTAAAACTACTACTTATGAAGACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  88.8% (222/250)  IGHV3-21*01  137  .......C.....C.......GT.G..G..G...CAT.T.............A.....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  D  E  S  P  D  R  W  
                    Query_6120   181  AGAATACTCTCTTTCTACAAATGAACAGCCTGAGGGCCGAGGACACGGCTGTTTATTTCTGTGCGAGAGACGAATCCCCCGATCGGTGGT  270
V  88.8% (222/250)  IGHV3-21*01  227  ....CT.A..G.A...G.................A.................G....A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-15*01  14   ------------------------------------------------------------------------------------......  19

                                      IMGT--------------------->                 
                                      F  R  L  L  P  N  L  D  V  W  G  Q  V  T  L
                    Query_6120   271  TCCGCCTCTTACCTAACCTCGACGTTTGGGGCCAGGTCACCCT  313
J  94.1% (16/17)    IGHJ1*01     19   --------------------------..........G......  35


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_255660

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           350     9e-99
IGHD2-15*01                                                                                           16.1    2.5  
IGHJ5*02                                                                                              39.1    6e-07


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTATT	TCCTGTGG	GGTGGTAG	TGGGGACTTCTTTTCTTTCCGATTTGG	CCCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TGGGGTGGTAGTGGGGACTTCTTTTCTTTCCGATTTGGCCCC	WGGSGDFFSFRFGP	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	278	109	96	13	0	88.1
Total	N/A	N/A	278	251	27	0	90.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  D  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  K
                    Query_6121   1    GCAGCTGGTGCAGTCTGGAGCTGACGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGGCACCTTCAGCAGCAA  90
V  90.3% (251/278)  IGHV1-69*06  6    ..................G.....G.........................................T.....................T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        S  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  L  I  P  L  F  G  T  P  N  Y  A  P
                    Query_6121   91   GTCTATCAGCTGGGTGCGGCAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGGGCCTCATCCCTCTCTTTGGAACACCTAACTACGCACC  180
V  90.3% (251/278)  IGHV1-69*06  96   TG................A................................A..GA........A.......T...G.A..........A  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  R  D  S  V  T  I  T  A  D  K  S  T  S  T  H  Y  M  E  L  S  S  L  G  A  D  D  T  A
                    Query_6121   181  GAAGTTCCGGGACAGCGTCACTATTACTGCGGACAAATCCACGAGCACACACTACATGGAGTTGAGCAGCCTGGGAGCTGATGACACGGC  270
V  90.3% (251/278)  IGHV1-69*06  186  ........A..G...A.....G.....C.....................GC..........C...........A..T....G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  F  L  W  G  G  S  G  D  F  F  S  F  R  F  G  P  L  G  P  G  T  L  G  P  V  S  P  
                    Query_6121   271  CGTTTATTTCCTGTGGGGTGGTAGTGGGGACTTCTTTTCTTTCCGATTTGGCCCCTTGGGCCCGGGGACCCTGGGCCCCGTCTCCCCAG  359
V  90.3% (251/278)  IGHV1-69*06  276  ...G....---------------------------------------------------------------------------------  283
                                        V  Y                                                                                   
D  100.0% (8/8)     IGHD2-15*01  14   ----------------........-----------------------------------------------------------------  21
J  84.2% (32/38)    IGHJ5*02     14   ---------------------------------------------------.....G.....A...A.......T.A........T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_213801

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           322     2e-90
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_6122   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_6122   91   CTAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-61*08  139  ..G..................T..T................C.................G.......TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N 
                    Query_6122   181  AGGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAAC  270
V  91.2% (228/250)  IGHV4-61*08  229  .A.................A.....GC..........................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G..G.....G.  22

                                      3-IMGT----------------------->                                  
                                       C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6122   271  TGCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  86.4% (19/22)    IGHD2-15*01  23   ......----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_350163

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD2-21*02                                                                                           14.1    8.2   
IGHJ3*02                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAGAC	GGTGGTAACT	CCTGG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGACGGTGGTAACTCCTGGGATGCTTTTGATATC	ARQDGGNSWDAFDI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	240	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6123   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.8% (240/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6123   91   TGGATTGGGTATATCTATTACACTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCAGTAGACACGTCCAAGAAC  180
V  98.8% (240/243)  IGHV4-59*01  139  ......................G.............................................A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  D  G  G  N  S  W  D  A 
                    Query_6123   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGACAAGACGGTGGTAACTCCTGGGATGCT  270
V  98.8% (240/243)  IGHV4-59*01  229  ...................G...........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD2-21*02  11   ---------------------------------------------------------------------......G...-----------  20
J  100.0% (49/49)   IGHJ3*02     2    ------------------------------------------------------------------------------------......  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6123   271  TTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  313
J  100.0% (49/49)   IGHJ3*02     8    ...........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_48798

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           389     2e-110
IGHD7-27*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGTCCTTTTA	CTAACTGGGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGTCCTTTTACTAACTGGGGTTGACTTT	AVLLLTGVDF	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	267	18	0	93.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  T  L  K  I  S  C  Q  G  S  G  H  S  F  T  N  Y
                    Query_6124   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGACTCTGAAGATCTCCTGTCAGGGTTCTGGACACAGCTTTACCAACTA  90
V  93.7% (267/285)  IGHV5-51*03  6    ...........................................T.................A...........T............G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  G  W  V  R  Q  R  P  G  E  G  L  E  W  M  G  L  I  Y  P  G  D  S  D  T  R  Y  N  S
                    Query_6124   91   CTTCATCGGCTGGGTGCGCCAGAGGCCCGGGGAAGGCCTGGAGTGGATGGGGCTCATTTATCCTGGTGACTCTGATACCAGGTACAACTC  180
V  93.7% (267/285)  IGHV5-51*03  96   ..GG...................T.......A....................A....C.......................A....G.C.  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6124   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.7% (267/285)  IGHV5-51*03  186  ...............G............................G..........C..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        F  Y  Y  C  A  V  L  L  L  T  G  V  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6124   271  CTTTTATTACTGTGCAGTCCTTTTACTAACTGGGGTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  347
V  93.7% (267/285)  IGHV5-51*03  276  .A.G...........--------------------------------------------------------------  290
                                        M  Y  Y  C  A                                                              
D  100.0% (10/10)   IGHD7-27*01  1    -------------------------..........------------------------------------------  10
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_236487

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           272     2e-75
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ATTACTCTGGTTCGGGGA	AAAGTCAAGGATTTCGGAAAT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGATTACTCTGGTTCGGGGAAAAGTCAAGGATTTCGGAAATTGGCTCGACCCC	ARDRITLVRGKVKDFGNWLDP	246	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	23	7	0	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	97	17	0	85.1
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	212	38	0	84.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  I  S  D  G  G  Y  T  W  N  W  I  R  Q  H  P  Q  K  G  
                    Query_6125   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTCCATCAGTGATGGTGGTTATACCTGGAATTGGATCCGCCAGCACCCACAGAAGGGCC  93
V  84.8% (212/250)  IGHV4-31*02  50   .....TCC...A..................G.........CAG.........CTA.....GC..................GG........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  L  G  S  I  A  Y  S  G  R  A  D  Y  N  P  S  L  R  S  R  L  S  V  S  K  D  T  S  
                    Query_6125   94   TGGAGTGGCTTGGGTCCATCGCTTACAGTGGGAGAGCCGATTACAATCCGTCCCTCAGGAGTCGACTTTCCGTGTCGAAAGACACGTCTA  183
V  84.8% (212/250)  IGHV4-31*02  140  ........A......A....TA............CA..T.C.....C..........A.......G..A..A.A..AGT...........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  Q  V  S  L  N  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  I  T  L  V  R  
                    Query_6125   184  AGAACCAGGTCTCCCTTAACGTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTATTGTGCGAGAGATCGGATTACTCTGGTTCGGG  273
V  84.8% (212/250)  IGHV4-31*02  230  ........T.......G..GC...............................G.....C...........--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD3-10*01  3    --------------------------------------------------------------------------......A.........  18

                                      DR3-IMGT-------------------------->                                  
                                      G  K  V  K  D  F  G  N  W  L  D  P  W  G  Q  G  T  Q  V  I  V  T  S  
                    Query_6125   274  GAAAAGTCAAGGATTTCGGAAATTGGCTCGACCCCTGGGGCCAGGGAACCCAGGTCATCGTCACCTCAG  342
D  94.4% (17/18)    IGHD3-10*01  19   ..-------------------------------------------------------------------  20
J  91.3% (42/46)    IGHJ5*02     6    -----------------------...T........................T.....C....T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_322961

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70D*04                                                                                          341     5e-96
IGHJ6*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70D*04	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGAT	N/A	N/A	N/A	GGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACACGGATGGACTTC	TRMDF	263	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	43	3	0	93.5
CDR1-IMGT	47	76	30	23	7	0	76.7
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	20	1	0	95.2
FR3-IMGT	149	262	114	100	14	0	87.7
CDR3-IMGT (germline)	263	270	8	7	1	0	87.5
Total	N/A	N/A	270	244	26	0	90.4


Alignments

                                       <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                         L  V  K  P  T  Q  T  L  T  L  T  C  A  F  S  G  F  S  L  S  T  G  G  M  R  V  S  W  I  R
                    Query_6126    1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCGCCTTTTCTGGGTTCTCACTTTCCACGGGGGGTATGCGTGTGAGCTGGATCCG  90
V  90.4% (244/270)  IGHV2-70D*04  30   ...........................A.........A....C..............CAG...TA.T..A....................  119
                                         L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  R  V  S  W  I  R

                                       -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                         Q  P  P  G  K  A  L  E  W  L  A  R  I  D  W  E  D  D  K  F  Y  S  T  S  L  K  S  R  L  T
                    Query_6126    91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACGCATTGATTGGGAAGATGATAAATTCTACAGTACATCTCTGAAGAGCAGACTCAC  180
V  90.4% (244/270)  IGHV2-70D*04  120  ................................................T.................C.............C...G.....  209
                                         Q  P  P  G  K  A  L  E  W  L  A  R  I  D  W  D  D  D  K  F  Y  S  T  S  L  K  T  R  L  T

                                       ---------------------FR3-IMGT----------------------------------------------------><--CDR3-
                                         I  Y  K  D  P  S  K  N  Q  I  V  L  R  M  T  N  M  G  P  A  D  T  G  T  Y  Y  C  T  R  M
                    Query_6126    181  CATCTACAAGGATCCGTCCAAAAACCAGATTGTCCTTAGAATGACCAACATGGGCCCTGCGGACACAGGCACTTATTACTGTACACGGAT  270
V  90.4% (244/270)  IGHV2-70D*04  210  .....C......CA.C............G.G.......C..............A.....T........C...G.........G.......  299
                                         I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                       IMGT-->                                 
                                         D  F  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6126    271  GGACTTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  310
J  97.5% (39/40)    IGHJ6*02      23   ....G...................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_322960

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           364     5e-103
IGHD6-19*01                                                                                           12.2    35    
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	GCTCCAG	GGCTGG	GATT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCCAGGGCTGGGATTCTTTGACTAT	AAPGLGFFDY	292	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	70	5	0	93.3
CDR1-IMGT	79	102	24	18	6	0	75
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	18	6	0	75
FR3-IMGT	178	291	114	102	12	0	89.5
CDR3-IMGT (germline)	292	294	3	3	0	0	100
Total	N/A	N/A	291	262	29	0	90


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  A  S  G  N  T  L  T 
                    Query_6127   4    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCGTCAGTGAAAGTTGCCTGCAAGGCATCCGGAAACACCCTCACC  93
V  90.0% (262/291)  IGHV1-46*01  1    .......................G.......................C........G...T.............T...T.....T.....  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  N  F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  N  K  Q  T  Y 
                    Query_6127   94   AACAACTTCATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTAATAAGCAAACCTAT  183
V  90.0% (262/291)  IGHV1-46*01  91   .G.T...AT..................................................................GG..GCAC..G...C  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  L  T  M  T  R  V  T  S  T  R  T  V  Y  K  E  R  S  N  L  R  F  E  D 
                    Query_6127   184  GCACAGAAGTTCCAGGGCAGACTGACCATGACGAGGGTCACGTCCACGAGAACAGTCTACAAGGAGCGGAGCAACCTGAGATTTGAGGAC  273
V  90.0% (262/291)  IGHV1-46*01  181  .....................G.C........C....A............C..........T.....T.....G........C.......  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------CDR3-IMGT--------->                                  
                                       T  A  V  Y  Y  C  A  A  P  G  L  G  F  F  D  Y  W  G  K  G  T  L  V  T  V  S  P  
                    Query_6127   274  ACGGCCGTGTATTACTGCGCGGCTCCAGGGCTGGGATTCTTTGACTATTGGGGAAAGGGAACCCTGGTCACCGTCTCCCCAG  355
V  90.0% (262/291)  IGHV1-46*01  271  .................T...-------------------------------------------------------------  291
                                       T  A  V  Y  Y  C  A                                                              
D  100.0% (6/6)     IGHD6-19*01  13   ----------------------------......------------------------------------------------  18
J  90.9% (40/44)    IGHJ4*02     5    --------------------------------------.........C.....CC.......................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_322963

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_6128   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T..........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  R  S  E 
                    Query_6128   91   GAGTGGATTGGGGAGATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCAAGTCTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ..............A....A..A..............A...................AG............A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  M  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_6128   181  AACCAGTTCTCCCTGATGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................A.....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6128   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_322962

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q 
                    Query_6129   1    ACCCTGTCCCTCACCTGCACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAA  90
V  91.0% (223/245)  IGHV4-59*01  49   ....................T..........................C........C............C.................G.G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_6129   91   TGGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAAC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A....G.....C...T....T....G......C..............C...........C.C.........A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E 
                    Query_6129   181  CAGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAG  270
V  91.0% (223/245)  IGHV4-59*01  229  ...T.........AG..G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  1    -----------------------------------------------------------------------------............-  12

                                      -------------->                                  
                                       D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_6129   271  GATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  319
J  92.5% (37/40)    IGHJ4*02     9    ---------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_322965

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            339     1e-95
IGHJ2*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	N/A	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	GCACGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCACGGATCCTGGTGCTTCGATTTC	ARHGSWCFDF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  E  A  S  G  F  T  F  N  T  Y  W  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_6130  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAATACCTACTGGATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-7*03  47   .....................C....................G..G...T......A.................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  T  D  G  S  T  Q  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_6130  91   AGTGGGTGGCCAACATAAAGACAGATGGAAGTACTCAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACCCCA  180
V  93.9% (232/247)  IGHV3-7*03  137  ....................CA..........GAGA..................................................G...  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                     T  N  S  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  H  G  S  W  C  F  D  
                    Query_6130  181  CGAACTCACTGTATTTGCAACTGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGGCACGGATCCTGGTGCTTCGATT  270
V  93.9% (232/247)  IGHV3-7*03  227  A.............C.....A..............................................-----------------------  293
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  94.0% (47/50)    IGHJ2*01    4    ----------------------------------------------------------------------------.....A.......C  17

                                     ->                                  
                                     F  W  G  R  G  T  L  V  S  V  S  S  
                    Query_6130  271  TCTGGGGCCGTGGCACCCTGGTCAGTGTCTCCTCAG  306
J  94.0% (47/50)    IGHJ2*01    18   ........................C...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_322964

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           335     4e-94
IGHD3-3*01                                                                                            43.0    2e-08
IGHJ5*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGGCGAGGCC	GTATTACGACTTTTGGAGTGGTTGTTAT	CGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGCGAGGCCGTATTACGACTTTTGGAGTGGTTGTTATCGGCTGGTTCGACCCC	ARGGRGRITTFGVVVIGWFDP	239	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	28	14	13	1	0	92.9
CDR1-IMGT	29	52	24	22	2	0	91.7
FR2-IMGT	53	103	51	48	3	0	94.1
CDR2-IMGT	104	124	21	21	0	0	100
FR3-IMGT	125	238	114	111	3	0	97.4
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	232	223	9	0	96.1


Alignments

                                      <--FR1-IMGT--><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><
                                         C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  W  I  G  E  
                    Query_6131   15   CCTGTGCTGTCTATGGTGGGTCCTTCAGTGGTTATTATTGGAGCTGGATCCGCCAGTCTCCAGGGAAGGGGCTGGAATGGATTGGGGAAA  104
V  96.1% (223/232)  IGHV4-34*01  62   ....C.............................C..C..................C.C.................G.............  151
                                         C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  E  

                                      -----CDR2-IMGT-----><----------------------------------------------------FR3-IMGT---------
                                      I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  K  K  Q  F  S  L  
                    Query_6131   105  TCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAAGAAACAGTTCTCCCTGA  194
V  96.1% (223/232)  IGHV4-34*01  152  ...............................................G............................C.............  241
                                      I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  

                                      -------------------------------------------><--------------------------CDR3-IMGT----------
                                      K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  R  G  R  I  T  T  F  G  V  V  V  
                    Query_6131   195  AGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGGGGCGAGGCCGTATTACGACTTTTGGAGTGGTTGTTA  284
V  96.1% (223/232)  IGHV4-34*01  242  .......C............................................--------------------------------------  293
                                      K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                                      
D  92.9% (26/28)    IGHD3-3*01   1    ---------------------------------------------------------------.........T.............A...  27

                                      ---------------->                                  
                                      I  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6131   285  TCGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  335
D  92.9% (26/28)    IGHD3-3*01   28   .--------------------------------------------------  28
J  97.9% (46/47)    IGHJ5*02     5    ----..........................................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_322967

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           333     1e-93
IGHD2-21*01                                                                                           12.2    33   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTTCTTTGGCGATTTCGA	CTATTC	GGGCCCCCTATCCACCCCACA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTCTTTGGCGATTTCGACTATTCGGGCCCCCTATCCACCCCACAAC	ARLSLAISTIRAPYPPHN	246	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  A  S  I  S  G  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_6132   4    CCCTGAGACTCTCCTGCTCTGTTTCTGGTGCCTCCATCAGTGGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  92.8% (231/249)  IGHV4-39*01  50   .....TCC...A.....A....C.......G.........CA..............................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  T  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  G  R  V  A  I  S  V  D  T  S  
                    Query_6132   94   TGGAGTGGATAGGGACTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGGGTCGAGTCGCCATATCCGTAGACACGTCCA  183
V  92.8% (231/249)  IGHV4-39*01  140  ..........T....G...........................................A........A.....................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  D  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  S  L  A  I  S  T  
                    Query_6132   184  AGGACCAGTTCTCCCTGAAACTGAACTCTGTGACCGCCGCAGACACGGCTCTGTATTACTGTGCGAGACTTTCTTTGGCGATTTCGACTA  273
V  92.8% (231/249)  IGHV4-39*01  230  ..A................G....G.........................G..................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*01  22   ---------------------------------------------------------------------------------------...  24

                                      IMGT--------------------->                                  
                                      I  R  A  P  Y  P  P  H  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6132   274  TTCGGGCCCCCTATCCACCCCACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (6/6)     IGHD2-21*01  25   ...---------------------------------------------------------  27
J  100.0% (36/36)   IGHJ4*02     13   ------------------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_322966

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*02                                                                                           366     2e-103
IGHD3-22*01                                                                                           16.1    2.3   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCATAAAGAGTGGTC	TGATAATAGTG	AAGGTCCCCCAC	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATAAAGAGTGGTCTGATAATAGTGAAGGTCCCCCACACTAT	AKDHKEWSDNSEGPPHY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6133   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAATTCCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-30*02  47   ..........................................G.AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6133   91   AGTGGGTGGCGCTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCG  180
V  96.8% (242/250)  IGHV3-30*02  137  ..........AT.....C.......................................................................A  226
                                      E  W  V  A  F  I  R  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      E  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  H  K  E  W  S  D  
                    Query_6133   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTTTATTACTGTGCGAAAGATCATAAAGAGTGGTCTGATA  270
V  96.8% (242/250)  IGHV3-30*02  227  ....................................................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.9% (10/11)    IGHD3-22*01  10   -------------------------------------------------------------------------------------.....  14

                                      GT-------------------->                                  
                                      N  S  E  G  P  P  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6133   271  ATAGTGAAGGTCCCCCACACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  90.9% (10/11)    IGHD3-22*01  15   G.....---------------------------------------------------  20
J  97.4% (38/39)    IGHJ4*02     10   ------------------....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_322969

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            336     1e-94
IGHD3-10*01                                                                                           10.3    119  
IGHJ6*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	CCCC	CGGGG	TTTAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGCCCCCGGGGTTTATTACTACGGTATGGACGTC	AKAPGVYYYGMDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  E  D  F  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6134   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTTGAAGATTTTGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  93.2% (232/249)  IGHV3-9*01   47   ....................................C......T....A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  T  R  V  Y  A  D  S  L  R  G  R  F  T  I  S  R  D  N  D  
                    Query_6134   91   AGTGGGTCTCAGGGATTAGTTGGAATAGTGGCACCAGAGTCTATGCGGACTCTCTGAGGGGCCGATTCACCATCTCCAGAGACAACGACA  180
V  93.2% (232/249)  IGHV3-9*01   137  .............T.................T.G..T..G.............G...A.............................C..  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  R  E  D  T  A  L  Y  F  C  A  K  A  P  G  V  Y  Y  Y  
                    Query_6134   181  AGAACTCCCTCTATCTACAAATGAACAGTCTGAGACGTGAAGACACGGCCTTGTATTTCTGTGCAAAAGCCCCCGGGGTTTATTACTACG  270
V  93.2% (232/249)  IGHV3-9*01   227  ..........G.....G..................GC...G................A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD3-10*01  15   -------------------------------------------------------------------------.....------------  19
J  100.0% (48/48)   IGHJ6*02     12   -----------------------------------------------------------------------------------.......  18

                                      ---------->                              
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_6134   271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  311
J  100.0% (48/48)   IGHJ6*02     19   .........................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_246896

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD1-26*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCATACGCC	GTGGGAG	GAAGGGATACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATACGCCGTGGGAGGAAGGGATACCCCTTGACTAC	AKDHTPWEEGIPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  L  S  R  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6135   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCATGCTTAGCAGATTTGCCATGAGTTGGGTCCGCCAGGCCCCTGGGAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-23*01  47   ............................T.......CCT.......C.A.........C..............T..A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  D  N  T  Y  Y  A  D  S  L  K  G  Q  F  S  I  S  R  D  S  S  
                    Query_6135   91   AGTGGGTCTCAGGTATCAGCGGAAGTGGTGATAACACGTATTATGCAGACTCCTTGAAGGGCCAGTTCTCCATCTCCAGAGACAGTTCCA  180
V  90.8% (227/250)  IGHV3-23*01  137  ............C...T..T..T.......G..G...A..C..C.........G.........G....A...............A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  H  T  P  W  E  E  
                    Query_6135   181  AGAACACGCTGTATCTGCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCATACGCCGTGGGAGGAAG  270
V  90.8% (227/250)  IGHV3-23*01  227  ......................G...............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD1-26*01  7    -------------------------------------------------------------------------------.......----  13

                                      ---------------->                                  
                                      G  I  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6135   271  GGATACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_316104

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     1e-109
IGHD6-25*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTC	ARQSSAGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	269	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  R  S  S  G  Y  D  F  L  D  Y
                    Query_6136   1    GCAGCTGGTGCAGTCTGGAGCAGAGCTAAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGAGTTCTGGGTACGACTTTCTCGACTA  90
V  92.4% (269/291)  IGHV5-51*01  6    .........................G.G..A.....C.........................A.G.......A...AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_6136   91   CTGGATCGTCTGGGTGCGCCAAATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGTCC  180
V  92.4% (269/291)  IGHV5-51*01  96   ........G............G..........................................................G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  A
                    Query_6136   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGCGCAGTCTGAAGGCCTCGGACACCGC  270
V  92.4% (269/291)  IGHV5-51*01  186  .............................C...............C..................A....C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_6136   271  CAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  360
V  92.4% (269/291)  IGHV5-51*01  276  ..T..................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  100.0% (48/48)   IGHJ6*02     15   -------------------------------------------...............................................  61

                                       
                                       
                    Query_6136   361  A  361
J  100.0% (48/48)   IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_316105

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           336     1e-94
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ5*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACGC	GCAGTGGTTGGT	CTAGAGGAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACGCGCAGTGGTTGGTCTAGAGGATACAACTGGTTCGACCCC	ARTRSGWSRGYNWFDP	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6137   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  94.2% (229/243)  IGHV4-59*01  49   ...........................................G............C.................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  D  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  S  I  S  G  D  T  S  K  N 
                    Query_6137   91   TGGATTGGATATATCTATGACAGTGGGAACACCAACTATAATCCCTCCCTCAAGAGTCGAGTCAGCATCTCAGGAGACACGTCCAAGAAC  180
V  94.2% (229/243)  IGHV4-59*01  139  ........G.........T.........G.........C..C......................C...A....T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  F  Y  Y  C  A  R  T  R  S  G  W  S  R  G  Y 
                    Query_6137   181  CAGTTCTCCCTGAAACTGAGCTCTGTGACCGCTGCGGACACGGCCTTTTATTACTGTGCGAGAACGCGCAGTGGTTGGTCTAGAGGATAC  270
V  94.2% (229/243)  IGHV4-59*01  229  ..............G..............................G.G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD6-19*01  8    -------------------------------------------------------------------.......C....-----------  19
J  98.0% (50/51)    IGHJ5*02     1    ----------------------------------------------------------------------------------------..  2

                                      -------------->                                  
                                       N  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_6137   271  AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  319
J  98.0% (50/51)    IGHJ5*02     3    .....................................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_246897

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           296     2e-82
IGHD1-26*01                                                                                           12.2    32   
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARAKGIAVIVDAFDF	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	98	16	0	86
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	216	27	0	88.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_6138   4    CCCTGAGACTCTCCTGCTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAGT  93
V  88.9% (216/243)  IGHV4-59*01  50   .....TCC...A.....A.....................G............................C....A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  V  S  V  D  M  S  N  N  
                    Query_6138   94   GGATTGGATATATCTATTACAGAGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAGACATGTCCAACAACC  183
V  88.9% (216/243)  IGHV4-59*01  140  .......G..............T....G.....A......C.....CC................CA.A..........C......G....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  K  G  I  A  V  I  V  D  
                    Query_6138   184  GGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGTGCGAGAGCTAAGGGTATCGCTGTTATAGTAGATG  273
V  88.9% (216/243)  IGHV4-59*01  230  A...........AG.................T.......CG.....G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD1-26*01  3    -------------------------------------------------------------------------------......-----  8
J  91.8% (45/49)    IGHJ3*01     2    --------------------------------------------------------------------------------------....  5

                                      ---------->                                  
                                      A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_6138   274  CTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  318
J  91.8% (45/49)    IGHJ3*01     6    ........G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_316100

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_6139   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_6139   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_6139   181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_6139   271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_316101

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           325     3e-91
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	AGGAATAGGCTGGAGC	ACTATGATAATAGTGGTT	GCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAAGGAATAGGCTGGAGCACTATGATAATAGTGGTTGCCTTGACTAC	ARRNRLEHYDNSGCLDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  N  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6140   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAATAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.9% (228/248)  IGHV3-30*03  47   ...................................A......G...C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  F  D  G  G  N  K  D  Y  A  D  S  V  R  G  R  F  S  I  S  R  D  N  S  
                    Query_6140   91   AGTGGCTGGCAGTTATATCATTTGATGGAGGTAACAAAGACTATGCAGACTCCGTGAGGGGCCGATTCTCCATCTCCAGAGACAATTCCA  180
V  91.9% (228/248)  IGHV3-30*03  137  .....G...............A.......A....T...T..................A..........A.....................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      N  N  T  V  Y  L  Q  L  N  S  L  S  A  G  D  T  A  V  Y  Y  C  A  R  R  N  R  L  E  H  Y  
                    Query_6140   181  ACAACACAGTATATCTGCAATTGAACAGCCTGAGCGCAGGGGACACGGCTGTCTATTACTGTGCGCGAAGGAATAGGCTGGAGCACTATG  270
V  91.9% (228/248)  IGHV3-30*03  227  .G.....GC.G.........A.............A..T.A............G............A..----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD3-22*01  6    ------------------------------------------------------------------------------------......  11

                                      GT-------------------->                                  
                                      D  N  S  G  C  L  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_6140   271  ATAATAGTGGTTGCCTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  327
D  94.4% (17/18)    IGHD3-22*01  12   ...G........---------------------------------------------  23
J  97.6% (41/42)    IGHJ4*02     7    ---------------...............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_316102

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           335     4e-94
IGHD5-18*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTAC	GTGGATACAG	ATC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTACGTGGATACAGATCCTACTTTGACTCC	ARLRGYRSYFDS	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	228	14	0	94.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_6141   4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTTCTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  94.2% (228/242)  IGHV4-34*01  50   .....TCC...A.................................A............................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  T  S  R  V  T  V  S  V  D  T  S  K  N  
                    Query_6141   94   GGATTGCAGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCACGAGTCGGGTCACCGTATCAGTAGACACGTCCAAGAACC  183
V  94.2% (228/242)  IGHV4-34*01  140  ......GG...........................................A......A......A........................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  R  G  Y  R  S  Y  F  D  
                    Query_6141   184  AGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACCGCTTTATATTACTGTGCGAGATTACGTGGATACAGATCCTACTTTGACT  273
V  94.2% (228/242)  IGHV4-34*01  230  ............A...........................G...G.G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD5-18*01  1    ------------------------------------------------------------------..........--------------  10
J  91.3% (42/46)    IGHJ4*02     2    -------------------------------------------------------------------------------...........  12

                                      ->                                 
                                      S  W  G  R  G  T  L  V  T  V  S  S 
                    Query_6141   274  CCTGGGGCCGGGGCACCCTGGTCACCGTCTCGTCA  308
J  91.3% (42/46)    IGHJ4*02     13   A........A...A.................C...  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_316103

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           290     2e-80
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	10	24	15	12	3	0	80
CDR1-IMGT	25	48	24	23	1	0	95.8
FR2-IMGT	49	99	51	45	6	0	88.2
CDR2-IMGT	100	120	21	17	4	0	81
FR3-IMGT	121	234	114	104	10	0	91.2
CDR3-IMGT (germline)	235	242	8	8	0	0	100
Total	N/A	N/A	233	209	24	0	89.7


Alignments

                                      <--FR1-IMGT---><-------CDR1-IMGT------><--------------------FR2-IMGT--------------------->
                                       T  H  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q  W  L  G  Y 
                    Query_6142   10   ACCCACACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAATGGCTTGGATAT  99
V  89.7% (209/233)  IGHV4-59*01  61   ...TG...T..........................C........C............C.................G.G...A....G...  150
                                       T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  Y 

                                      <-----CDR2-IMGT-----><----------------------------------------------------FR3-IMGT--------
                                       I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N  Q  V  S  L 
                    Query_6142   100  ATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAACCAGGTCTCCCTG  189
V  89.7% (209/233)  IGHV4-59*01  151  ..C...T....T....G......C..............C...........C.C.........A..................T........  240
                                       I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L 

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E  D  A  L  D 
                    Query_6142   190  AGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGAC  279
V  89.7% (209/233)  IGHV4-59*01  241  .AG..G.G.............................................-------------------------------------  293
                                       K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (12/12)   IGHD4-17*01  1    -----------------------------------------------------------------............-------------  12
J  92.5% (37/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_6142   280  TACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  316
J  92.5% (37/40)    IGHJ4*02     12   ................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_316109

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           310     1e-86
IGHD3-10*01                                                                                           16.1    2.4  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCT	TTCGGGGGGTT	CGATCTTCGGATTCACTCTTATACAGGGATATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTTCGGGGGGTTCGATCTTCGGATTCACTCTTATACAGGGATATTATGGTATGGATGTC	ARDLSGGSIFGFTLIQGYYGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  G  S  Y  V  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6143   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAATTTCGGAAGCTATGTCATGCACTGGGTCCGCCAGGCTCCAGGCAAAGGGCTGG  90
V  89.6% (224/250)  IGHV3-33*01  47   ....................................CC...A.T.......G..............................G.......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  R  Y  D  G  S  N  E  K  Y  A  D  S  V  K  G  R  F  T  V  S  R  E  N  S  
                    Query_6143   91   AGTGGGTGGCAAATATACGGTATGATGGAAGTAATGAAAAATATGCAGACTCCGTGAAGGGCCGATTTACTGTCTCCAGAGAGAATTCCA  180
V  89.6% (224/250)  IGHV3-33*01  137  ...........GT....T.................A..T.C..........................C..CA..........C.......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  M  L  Y  I  Q  M  N  S  L  R  T  E  D  S  G  I  Y  Y  C  A  R  D  L  S  G  G  S  I  
                    Query_6143   181  AGAACATGCTTTATATACAGATGAACAGCCTGAGAACCGAGGACTCGGGTATATATTACTGTGCGAGAGATCTTTCGGGGGGTTCGATCT  270
V  89.6% (224/250)  IGHV3-33*01  227  ......C...G...C.G..A...............G........A...C.G.G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD3-10*01  13   -------------------------------------------------------------------------.......A...------  23

                                      --CDR3-IMGT----------------------------->                                 
                                      F  G  F  T  L  I  Q  G  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6143   271  TCGGATTCACTCTTATACAGGGATATTATGGTATGGATGTCTGGGGCCAGGGGACCACGGTCACCGTCTCCTCA  344
J  95.6% (43/45)    IGHJ6*02     18   -----------------------------........C...........A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_246891

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           366     2e-103
IGHD2-2*01                                                                                            12.2    37    
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAGCCACAATTAGTCCG	AGTAGT	TT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCCACAATTAGTCCGAGTAGTTTCTACTACGGTATGGACGTC	ARDLATISPSSFYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	262	28	0	90.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  T  V  S  C  K  S  S  G  Y  T  F  T  S  Y 
                    Query_6144   2    CAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGACGGTCTCCTGCAAGTCTTCCGGGTACACCTTTACCAGTTAC  91
V  90.3% (262/290)  IGHV1-18*04  7    ...................C.............................A.............G....T..T..............C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  Y  Y  A  Q 
                    Query_6144   92   GGCATCACCTGGGTGCGGCAGGCCCCTGGACAGGGCCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACATACTATGCACAG  181
V  90.3% (262/290)  IGHV1-18*04  97   ..T....G.........A..............A..G.............................C......A.....A...........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  M  T  R  N  T  S  T  S  T  V  H  M  E  V  R  G  L  T  S  D  D  T  A 
                    Query_6144   182  ATGGTCCGCGACAGAGTCACCATGACCAGGAATACATCCACGAGCACAGTCCACATGGAGGTGAGGGGCCTGACATCTGACGACACGGCC  271
V  90.3% (262/290)  IGHV1-18*04  187  .A.C...AG.G.................CAG.C................C.T........C.....A......G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  I  S  P  S  S  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_6144   272  GTGTATTACTGTGCGAGAGATTTAGCCACAATTAGTCCGAGTAGTTTCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACC  361
V  90.3% (262/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD2-2*01   11   ---------------------------------------......---------------------------------------------  16
J  100.0% (52/52)   IGHJ6*02     11   -----------------------------------------------...........................................  53

                                               
                                       V  S  S 
                    Query_6144   362  GTCTCCTCA  370
J  100.0% (52/52)   IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_31915

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           425     3e-121
IGHD2-2*01                                                                                            10.3    134   
IGHJ3*01                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTGAAGTCTTT	TACCA	CCGAG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATGTC	ASLKSFTTEDAFDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	280	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  T  S  G  Y  S  F  T  S  Y
                    Query_6145   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGCTTTACCAGCTA  90
V  97.2% (280/288)  IGHV5-51*03  6    ................................................................GG........................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  L  I  Y  P  S  D  S  D  T  T  Y  S  P
                    Query_6145   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGCCTCATCTATCCCAGTGACTCTGATACCACATACAGCCC  180
V  97.2% (280/288)  IGHV5-51*03  96   ........G..........................................GA..........TG...............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6145   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.2% (280/288)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  S  L  K  S  F  T  T  E  D  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6145   271  CATGTATTACTGTGCGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  359
V  97.2% (280/288)  IGHV5-51*03  276  ..................-----------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                          
D  100.0% (5/5)     IGHD2-2*01   16   ------------------------------.....------------------------------------------------------  20
J  100.0% (49/49)   IGHJ3*01     2    ----------------------------------------.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_31917

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           311     5e-87
IGHD3-10*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	TGCCCCTGAC	GTATTAGTCCGGTTCGGGGAG	CCTCTCCTAAGTAGAGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATGCCCCTGACGTATTAGTCCGGTTCGGGGAGCCTCTCCTAAGTAGAGGTTTTGATATC	ANAPDVLVRFGEPLLSRGFDI	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	223	24	0	90.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  N  Y  A  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6146   1    GGTCCCTGAGACTTTCCTGTGCAGCCTCTGGATTTACGTTTGACAACTATGCCTTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.3% (223/247)  IGHV3-23*01  47   .............C....................C..C...AG..G.......A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  S  Y  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6146   91   AGTGGGTCTCAAGTATTAGTGGTAGTGGAAGTTATACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATTTCCAGGGACAATTCCA  180
V  90.3% (223/247)  IGHV3-23*01  137  ...........GC...............TG..AGC......................................C.....A..........  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  A  L  Q  M  S  S  L  S  A  E  D  T  A  L  Y  Y  C  A  N  A  P  D  V  L  V  R  
                    Query_6146   181  AGAATACCCTGGCTCTGCAAATGAGCAGCCTGAGCGCCGAGGACACGGCCTTATATTACTGTGCGAATGCCCCTGACGTATTAGTCCGGT  270
V  90.3% (223/247)  IGHV3-23*01  227  ....C..G...TA...........A.........A...............G................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  85.7% (18/21)    IGHD3-10*01  1    -----------------------------------------------------------------------------......C.AT...  13

                                      DR3-IMGT-------------------------->                                  
                                      F  G  E  P  L  L  S  R  G  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6146   271  TCGGGGAGCCTCTCCTAAGTAGAGGTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  339
D  85.7% (18/21)    IGHD3-10*01  14   ........-------------------------------------------------------------  21
J  100.0% (44/44)   IGHJ3*02     7    -------------------------............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_31910

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           338     4e-95
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	107	7	0	93.9
Total	N/A	N/A	242	229	13	0	94.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  G  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6147   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACGTTGAGTGGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.6% (229/242)  IGHV3-33*03  47   .....................................C..C...A.C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_6147   91   AGTGGGTGGCAGTTATATGGTATGATGGAATTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCA  180
V  94.6% (229/242)  IGHV3-33*03  137  ..............................G....................................................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_6147   181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCG  270
V  94.6% (229/242)  IGHV3-33*03  227  .......G....A......A..............................G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  90.9% (10/11)    IGHD6-13*01  7    -------------------------------------------------------------------....G......------------  17
J  100.0% (46/46)   IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6147   271  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (46/46)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_296429

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            361     5e-102
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	TCCCGACA	TATTACTATGATTCGGGGAGTTAT	CACACCCCAAATGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGTCCCGACATATTACTATGATTCGGGGAGTTATCACACCCCAAATGGTGCTTTTGATATC	AKVPTYYYDSGSYHTPNGAFDI	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  T  P  G  Q  G  L  
                    Query_6148   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTACGCCATGCACTGGGTCCGGCAAACTCCAGGGCAGGGCCTGG  90
V  96.4% (240/249)  IGHV3-9*01   47   .................................................T.....................G........A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  T  I  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  G  
                    Query_6148   91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGGTACCATAGCCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGGCC  180
V  96.4% (240/249)  IGHV3-9*01   137  .................................G.....G...............................................C.A  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      Q  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  V  P  T  Y  Y  Y  D  
                    Query_6148   181  AGAACTCCCTGTACCTGCAGATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGTCCCGACATATTACTATGATT  270
V  96.4% (240/249)  IGHV3-9*01   227  .............T.....A.................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  95.8% (23/24)    IGHD3-10*01  2    -----------------------------------------------------------------------------..........G..  14

                                      -CDR3-IMGT--------------------------->                                  
                                      S  G  S  Y  H  T  P  N  G  A  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6148   271  CGGGGAGTTATCACACCCCAAATGGTGCTTTTGATATCTGGGGCCAAGGGACATTGGTCACCGTCTCTTCAG  342
D  95.8% (23/24)    IGHD3-10*01  15   ...........-------------------------------------------------------------  25
J  97.9% (46/47)    IGHJ3*02     4    -------------------------............................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_31912

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           374     7e-106
IGHD3-3*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	242	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6149   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (242/245)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_6149   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.8% (242/245)  IGHV4-34*01  139  .........................................................................T................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_6149   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  98.8% (242/245)  IGHV4-34*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  *  G  T  L  V  T  V  S  S  
                    Query_6149   271  GCCCCTTTTGACTACTGGGGCTAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  97.7% (42/43)    IGHJ4*02     6    ------...............C...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_31913

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           391     6e-111
IGHD3-3*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	GGAGAGTCTG	CGATTTCTGGAGTGGTTAT	CCCCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTAC	AREESLRFLEWLSPDY	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	71	4	0	94.7
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	298	8	7	1	0	87.5
Total	N/A	N/A	296	273	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  L  T 
                    Query_6150   3    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTAAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTGACC  92
V  92.2% (273/296)  IGHV1-18*01  1    ...G.T...............................................G.................T..............T...  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  S  M  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  S  N  I  N  Y 
                    Query_6150   93   AGATATAGTATGTCTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATAGCAACATAAATTAT  182
V  92.2% (273/296)  IGHV1-18*01  91   ..C...G....CAGC....................................................C.......G.T....C...C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  L  L  G  R  V  T  M  T  I  D  T  S  A  N  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_6150   183  GCACAGAAACTCCTGGGCAGAGTCACCATGACCATAGACACATCCGCGAACACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  272
V  92.2% (273/296)  IGHV1-18*01  181  ........G....A....................C..........A...G........................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  E  E  S  L  R  F  L  E  W  L  S  P  D  Y  W  G  Q  G  T  L  V  I 
                    Query_6150   273  ACGGCCGTGTATTATTGTGCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTACTGGGGCCAGGGAACCCTGGTCATC  362
V  92.2% (273/296)  IGHV1-18*01  271  ..............C........A..----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.7% (18/19)    IGHD3-3*01   7    ------------------------------------......T............-----------------------------------  25
J  97.1% (34/35)    IGHJ4*02     9    ------------------------------------------------------------............................C.  38

                                           
                                       V  S
                    Query_6150   363  GTCTC  367
J  97.1% (34/35)    IGHJ4*02     39   .....  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_296424

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           333     1e-93
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	TCACCTAT	TATGATAATAGTGGAAATTAC	CCCCGAAATAACAA	GTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGTCACCTATTATGATAATAGTGGAAATTACCCCCGAAATAACAAGTTCGACCCC	AGVTYYDNSGNYPRNNKFDP	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  V  S  G  F  I  F  S  S  Y  E  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6151   1    GGTCCCTGAGACTCTCCTGTTCAGTCTCTGGATTTATCTTCAGTTCATATGAAATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-48*03  47   ....................G...C.........C.C.......AGT..........A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  T  S  G  G  A  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6151   91   AGTGGATTTCATATATTAGTACTAGTGGTGGCGCCATATACTACGCAGATTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.8% (231/249)  IGHV3-48*03  137  .....G.......C.......G.......A.TA................C........................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  G  V  T  Y  Y  D  N  S  
                    Query_6151   181  AGAACTCACTGTATCTGCAAATGAACAGTTTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGGGAGTCACCTATTATGATAATAGTG  270
V  92.8% (231/249)  IGHV3-48*03  227  ............................CC...................................A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  85.7% (18/21)    IGHD3-22*01  8    -----------------------------------------------------------------------------.......G.....  20

                                      R3-IMGT------------------------>                                  
                                      G  N  Y  P  R  N  N  K  F  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_6151   271  GAAATTACCCCCGAAATAACAAGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  336
D  85.7% (18/21)    IGHD3-22*01  21   .TT.....----------------------------------------------------------  28
J  97.7% (43/44)    IGHJ5*02     8    ----------------------................................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_296425

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           357     1e-100
IGHD3-3*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	236	8	0	96.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_6152   4    CCCTGAGACTCTCCTGTGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  96.7% (236/244)  IGHV4-34*01  50   .....TCC...A....C...............................A.........................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N  
                    Query_6152   94   GGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAACC  183
V  96.7% (236/244)  IGHV4-34*01  140  ........................................................................T.................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V  
                    Query_6152   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCG  273
V  96.7% (236/244)  IGHV4-34*01  230  ..............................................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  100.0% (7/7)     IGHD3-3*01   9    --------------------------------------------------------------------------------.......---  15

                                      ------------->                                  
                                      A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6152   274  CCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (43/43)   IGHJ4*02     6    -----...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_296426

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           333     1e-93
IGHD1-7*01                                                                                            14.1    8.4  
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCAGTTT	GAACTAC	GGCCTTGGTGCAG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCAGTTTGAACTACGGCCTTGGTGCAGTTTTGATATT	ARHQFELRPWCSFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	232	19	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  G  N  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_6153   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGCAGTGGTAATTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  92.4% (232/251)  IGHV4-39*01  49   .......................................A.....A...G.......................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  T  G  L  T  Y  Y  T  P  S  L  E  S  R  L  T  I  S  V  D  T  S 
                    Query_6153   91   CTGGAGTGGATTGGGAGCATCTATTATACTGGGCTCACCTACTACACCCCGTCCCTCGAGAGTCGACTCACCATATCCGTGGACACGTCC  180
V  92.4% (232/251)  IGHV4-39*01  139  .................T..........G....AG...........A..........A........G.............A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  Q  F  S  L  S  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Q  F  E  L  R  P 
                    Query_6153   181  AGAAACCAGTTCTCCCTGAGCCTCAGCTCTGTGACCGCCGCAGATACGGCTGTATATTACTGTGCGAGACATCAGTTTGAACTACGGCCT  270
V  92.4% (232/251)  IGHV4-39*01  229  .AG................AG..G....................C........G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD1-7*01   11   ------------------------------------------------------------------------------.......-----  17

                                      ----------------->                                  
                                       W  C  S  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6153   271  TGGTGCAGTTTTGATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  97.7% (43/44)    IGHJ3*02     7    --------.........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_296427

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           213     2e-57
IGHD3-16*01                                                                                           25.7    0.003
IGHJ3*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACCTAT	GTTTGGGGGAGTT	TACGCCGCAATCACGATTGCCTTAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACCTATGTTTGGGGGAGTTTACGCCGCAATCACGATTGCCTTACTGTC	ARGLLIEDPTYVWGSLRRNHDCLTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	35	16	0	68.6
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	88	26	0	77.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	190	54	0	77.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  V  R  Q  P  P  G  G  G  L  Q 
                    Query_6154   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCTATCGGAACTTACTACTGGCACTGGGTGCGGCAACCTCCAGGGGGGGGTCTGCAG  90
V  77.9% (190/244)  IGHV4-59*01  49   .......................C.......G...C...A.T.G..........AG....A.C.....G..C......AA...A...G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  A  M  F  L  S  T  G  T  T  L  Y  N  P  S  V  R  G  R  V  T  V  S  G  D  T  S  R  N 
                    Query_6154   91   TGGCTTGCCATGTTCTTATCCACTGGGACCACCCTCTACAACCCCTCCGTCAGGGGTCGTGTCACCGTGTCGGGCGACACGTCTCGGAAT  180
V  77.9% (190/244)  IGHV4-59*01  139  ...A...GGTATA...AT.A..G.....G....AA.............C...A.A....A......A.A..A.TA........CAA...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_6154   181  CAGTTGTCCCTCAACCTCATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACCTAT  270
V  77.9% (190/244)  IGHV4-59*01  229  .....C.....G..G..G.G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  L  R  R  N  H  D  C  L  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_6154   271  GTTTGGGGGAGTTTACGCCGCAATCACGATTGCCTTACTGTCTGGGGCCAGGGGACACCGGTCACCGTCTCTTCAG  346
D  100.0% (13/13)   IGHD3-16*01  14   .............---------------------------------------------------------------  26
J  92.1% (35/38)    IGHJ3*01     13   --------------------------------------............A......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_31919

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCT	TTACTATGATAGTAGTGCTTA	CTATGCCTCTTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCTTTACTATGATAGTAGTGCTTACTATGCCTCTTTCTACGTTCTGGACGTC	ARELYYDSSAYYASFYVLDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6155   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  K  N 
                    Query_6155   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACATCCAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  ........G..................A................................G...................G.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  L  Y  Y  D  S  S  A  Y 
                    Query_6155   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGAGCTTTACTATGATAGTAGTGCTTAC  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............C...............................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.2% (20/21)    IGHD3-22*01  4    --------------------------------------------------------------------.................G...-  24

                                      GT------------------------>                                 
                                       Y  A  S  F  Y  V  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6155   271  TATGCCTCTTTCTACGTTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
J  95.9% (47/49)    IGHJ6*02     14   -----------.....G.A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_296423

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           394     7e-112
IGHD1-1*01                                                                                            18.0    0.64  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GTC	TACAACTGG	CGGGAGGGGGCGTTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTCTACAACTGGCGGGAGGGGGCGTTCACTAC	GLQLAGGGVHY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	284	1	1	0	0	100
Total	N/A	N/A	284	268	16	0	94.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y
                    Query_6156   1    GCAGCTGGTGCAGTCTGGAGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGCAATTA  90
V  94.4% (268/284)  IGHV3-33*01  6    ..........G.......G.................................................................T.GC..  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  I  I  W  Y  D  G  S  N  K  H  Y  A  D
                    Query_6156   91   TGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAATTATATGGTATGATGGAAGTAACAAACACTATGCAGA  180
V  94.4% (268/284)  IGHV3-33*01  96   ....................................................G......................T...T..........  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  Q  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  G  V  D  D  T  A
                    Query_6156   181  CTCCGTCCAGGGCCGATTCACCATATCCAGAGACAATTCCAAGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGTCGACGACACGGC  270
V  94.4% (268/284)  IGHV3-33*01  186  ......GA................C........................C.......................A...C...G........  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        V  Y  Y  C  G  L  Q  L  A  G  G  G  V  H  Y  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_6156   271  TGTATATTACTGTGGTCTACAACTGGCGGGAGGGGGCGTTCACTACAGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  94.4% (268/284)  IGHV3-33*01  276  ...G..........------------------------------------------------------------------  289
                                        V  Y  Y  C                                                                    
D  100.0% (9/9)     IGHD1-1*01   3    -----------------.........------------------------------------------------------  11
J  97.4% (38/39)    IGHJ4*02     10   -----------------------------------------.....T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_140295

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           308     4e-86
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GGG	CTATGCTTCGGGGAGTCATT	TCAAATCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGGGCTATGCTTCGGGGAGTCATTTCAAATCTCACTTTGACTAC	AKEGYASGSHFKSHFDY	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	125	24	18	6	0	75
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	233	215	18	0	92.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  T  P  G  Q  G  L  E  W  L  A  V  V 
                    Query_6157   15   TGTGCAGCCTCTGGATTCACCTTCAGGAGTTATGGCATGCACTGGGTCCGCCAGACTCCAGGCCAGGGGCTGGAGTGGCTGGCAGTTGTA  104
V  92.3% (215/233)  IGHV3-30*18  64   ..........................T..C........................G........A..............G........A..  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  D  G  S  V  Q  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  Q  N  T  L  Y  L 
                    Query_6157   105  TCAAGTGATGGAAGTGTTCAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCCAGAACACGCTGTATCTG  194
V  92.3% (215/233)  IGHV3-30*18  154  ...TA..........AA.A.....................................................A.................  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------------CDR3-IMGT---------------
                                       Q  M  N  S  L  R  S  E  D  T  A  A  Y  H  C  A  K  E  G  Y  A  S  G  S  H  F  K  S  H  F 
                    Query_6157   195  CAAATGAATAGCCTGAGATCTGAGGATACGGCTGCTTATCACTGTGCGAAAGAGGGCTATGCTTCGGGGAGTCATTTCAAATCTCACTTT  284
V  92.3% (215/233)  IGHV3-30*18  244  ........C.........G.......C.......TG...T.............-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  90.0% (18/20)    IGHD3-10*01  7    --------------------------------------------------------.....G..........T...--------------  26
J  97.8% (44/45)    IGHJ4*02     4    -------------------------------------------------------------------------------------.....  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_6157   285  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  324
J  97.8% (44/45)    IGHJ4*02     9    .................................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_140294

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           352     3e-99
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TGGAGACC	TTCGGGGAGTTATTAT	TTG	GGGGC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6158   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTTAGTAGATATTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-74*01  47   .....................................C..C.....C..C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  G  D  G  S  G  T  S  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6158   91   TGTGGGTCTCCCGTATTAACGGTGATGGGAGTGGCACAAGCTCCGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (237/249)  IGHV3-74*01  137  ..........A........TA...........A.........A...............................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT---------------------------------------------------->                            
                                      K  K  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  V  E  T  F  G  E  L  
                    Query_6158   181  AGAAAACACTGTATCTGCAAATGAACAGTCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCAAGAGTGGAGACCTTCGGGGAGTTAT  270
V  95.2% (237/249)  IGHV3-74*01  227  ....C..G............................C................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (16/16)   IGHD3-10*01  13   -----------------------------------------------------------------------------.............  25

                                                                             
                                      L  F  G  G  Q  G  T  L  V  T  V  S  S  
                    Query_6158   271  TATTTGGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
D  100.0% (16/16)   IGHD3-10*01  26   ...------------------------------------  28
J  100.0% (33/33)   IGHJ4*02     16   ------.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_102145

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           41.1    7e-08
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TT	TATTACTATGACAGTAGTGGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTATTACTATGACAGTAGTGGTTATTTTGACTAC	ARLYYYDSSGYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  N  S  Y  W  G  W  I  R  Q  P  P  G  M  G 
                    Query_6159   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGCAGTAATTCCTACTGGGGCTGGATCCGCCAGCCCCCAGGGATGGGG  90
V  93.6% (234/250)  IGHV4-39*01  49   ............................................T....G..A................................A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  S  S  S  G  Y  T  Y  Y  N  P  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_6159   91   CTGGAGTGGATTGGGAGTATCTCTTCTAGTGGGTACACCTATTACAACCCGTCCCTCAAGAGTCGAATCACCATATCCGTGGACACGTCC  180
V  93.6% (234/250)  IGHV4-39*01  139  ......................A..A.......AG......C........................G.............A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  V  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  Y  Y  Y  D  S  S 
                    Query_6159   181  AAGAACCAGGTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGACTTTATTACTATGACAGTAGT  270
V  93.6% (234/250)  IGHV4-39*01  229  .........T.........A......C..............A...........G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.8% (23/24)    IGHD3-22*01  2    ------------------------------------------------------------------------...........T......  19

                                      -------------->                                  
                                       G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6159   271  GGTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
D  95.8% (23/24)    IGHD3-22*01  20   ......-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_155999

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         333     1e-93
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGC	TGTAGTGGTGTTAACAGCTACT	GT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCTGTAGTGGTGTTAACAGCTACTGTCTACTTTGACTCC	AREAVVVLTATVYFDS	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	56	27	26	1	0	96.3
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	18	3	0	85.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  R  L  S  C  V  V  S  G  Y  S  I  S  S  D  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  
                    Query_6160     4    CCCTGAGACTCTCCTGCGTTGTCTCTGGTTACTCCATCAGCAGTGATTACTACTGGGGCTGGATCCGGCAGCCCCCTGGGAAGGGGCTGG  93
V  93.1% (230/247)  IGHV4-38-2*02  50   .....TCC...A.....AC..........................G..............................A.............  139
                                           L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  G  S  V  Y  H  S  G  I  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  
                    Query_6160     94   AATGGATTGGGAGTGTCTATCATAGTGGCATCACCTACGACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGA  183
V  93.1% (230/247)  IGHV4-38-2*02  140  .G............A.............G.G.......T...................................................  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                        N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  V  V  V  L  T  A  
                    Query_6160     184  ACCAGTTCTCCCTAAAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGAAGCTGTAGTGGTGTTAACAGCTA  273
V  93.1% (230/247)  IGHV4-38-2*02  230  .............G........C..............A...........G.................-----------------------  296
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                          
D  86.4% (19/22)    IGHD2-15*01    8    ----------------------------------------------------------------------..........G..G.T....  27

                                        ---------------->                                  
                                        T  V  Y  F  D  S  W  G  Q  G  A  L  V  S  V  S  S  
                    Query_6160     274  CTGTCTACTTTGACTCCTGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  324
D  86.4% (19/22)    IGHD2-15*01    28   ..-------------------------------------------------  29
J  93.6% (44/47)    IGHJ4*02       2    ----...........A.............A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_140296

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_6161   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG..G.T..................................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_6161   91   TGGATTGGATATATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  93.4% (228/244)  IGHV4-59*01  139  ........G...................G.....A............................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W 
                    Query_6161   181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------------------------------------------....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_6161   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (35/35)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_155990

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           372     2e-105
IGHD4-17*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              60.3    2e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	N/A	CTACGGTGAC	CAAACACACCAGGAGGAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGACTACGGTGACCAAACACACCAGGAGGAGTAC	TTDYGDQTHQEEY	249	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	247	9	0	96.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6162   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.5% (247/256)  IGHV3-15*01  47   .......T....................................A.............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  I  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  S  I  S  R  D  
                    Query_6162   91   AGTGGGTTGGCCGTATTAAAAGCAAAATTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCAGTATCTCAAGAGACG  180
V  96.5% (247/256)  IGHV3-15*01  137  ...........................C...............................................CC...........T.  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      D  S  K  N  T  L  Y  L  Q  M  N  N  L  K  T  E  D  T  A  V  Y  Y  C  T  T  D  Y  G  D  Q  
                    Query_6162   181  ATTCAAAAAACACACTGTATCTGCAAATGAACAACTTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGACTACGGTGACCAAA  270
V  96.5% (247/256)  IGHV3-15*01  227  .............G...................G.C........................................--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (10/10)   IGHD4-17*01  4    ----------------------------------------------------------------------------..........----  13

                                      GT-------------->                                  
                                      T  H  Q  E  E  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_6162   271  CACACCAGGAGGAGTACTGGGGCCAGGGAGCCCTGGTCACTGTCTCCTCAG  321
J  94.6% (35/37)    IGHJ4*02     12   --------------...............A..........C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_140291

Length=318
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           271     6e-75
IGHD1-26*01                                                                                           27.6    7e-04
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGACA	TGGGGATG	ATAGTGGGAGCTAC	CTT	TACTA	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	67	56	52	4	0	92.9
CDR1-IMGT	68	91	24	22	2	0	91.7
FR2-IMGT	92	142	51	49	2	0	96.1
CDR2-IMGT	143	166	24	23	1	0	95.8
FR3-IMGT	167	212	46	41	5	0	89.1
Total	N/A	N/A	201	187	14	0	93


Alignments

                                      <-----------------------FR1-IMGT-----------------------><-------CDR1-IMGT------><---------
                                         C  A  E  V  T  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  N  Y  W  I  A  W  
                    Query_6163   12   CTTGTGCAGAGGTGACAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAATTACTGGATCGCCTGGG  101
V  93.0% (187/201)  IGHV5-51*01  20   ..G.A..........A...................................G....................GC..........G.....  109
                                         G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W  I  G  W  

                                      -----------FR2-IMGT---------------------><-------CDR2-IMGT------><------------------------
                                      V  R  Q  M  P  G  K  G  L  E  W  V  G  I  M  Y  P  G  D  S  D  T  R  Y  S  P  S  F  E  G  
                    Query_6163   102  TGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGGTGGGGATCATGTATCCTGGTGACTCTGATACCAGATATAGCCCGTCTTTCGAGGGCC  191
V  93.0% (187/201)  IGHV5-51*01  110  ................................A..........C..........................C........C...C.A....  199
                                      V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S  F  Q  G  

                                      ----------------------------FR3-IMGT----------------------------------------------------> 
                                      H  V  T  I  S  A  D  M  G  M  I  V  G  A  T  F  T  T  S  T  A  W  T  S  G  A  R  G  P  R  
                    Query_6163   192  ACGTCACCATCTCAGCCGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTCTGGGGCCCGGGGACCACGGT  281
V  93.0% (187/201)  IGHV5-51*01  200  .G...................---------------------------------------------------------------------  220
                                      Q  V  T  I  S  A  D                                                                       
D  100.0% (14/14)   IGHD1-26*01  4    -----------------------------..............-----------------------------------------------  17
J  93.0% (53/57)    IGHJ6*02     6    ----------------------------------------------.......A......T................AA...........  49

                                                   
                                      S  P  S  P   
                    Query_6163   282  CACCGTCTCCTCA  294
J  93.0% (53/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30726981


Query= Query_155994

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           361     4e-102
IGHD1-7*01                                                                                            19.9    0.16  
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGGCCC	GTATAATTCGAACTAC	CCCCATAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGCCCGTATAATTCGAACTACCCCCATACCTACTACTACTGTGGCATGGACGTC	AKGPYNSNYPHTYYYCGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	239	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6164   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (239/247)  IGHV3-30*18  47   ........................C.................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  Q  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6164   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTAATCAATACTATGCAGAGTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  96.8% (239/247)  IGHV3-30*18  137  ...................................A.............C...................................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  K  G  P  Y  N  S  N  Y  
                    Query_6164   181  AGAACACACTGTTTCTGCAAATGAACAGCCTGAGAGCTGGGGACACGGCTGTGTATTATTGTGCGAAGGGCCCGTATAATTCGAACTACC  270
V  96.8% (239/247)  IGHV3-30*18  227  .......G....A..........................A..................C........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  87.5% (14/16)    IGHD1-7*01   2    -------------------------------------------------------------------------......C.G.......-  17

                                      R3-IMGT------------------------>                                 
                                      P  H  T  Y  Y  Y  C  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6164   271  CCCATACCTACTACTACTGTGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
J  94.8% (55/58)    IGHJ6*02     5    -------...........AC..T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_155995

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           321     6e-90
IGHD6-13*01                                                                                           14.1    8.2  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGC	GGGTATTGCA	TTATGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCGGGTATTGCATTATGGTGGTTCGACCCC	ARGAGIALWWFDP	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  V  S  G  F  T  F  S  D  F  Y  M  S  W  V  R  Q  T  P  G  K  G  L  
                    Query_6165   1    GGTCCCTGAGACTCTCCTGTGAAGTCTCTGGATTCACCTTCAGTGACTTCTACATGAGTTGGGTCCGCCAGACTCCAGGGAAGGGGCTAG  90
V  91.2% (227/249)  IGHV3-11*01  47   .....................C..C.......................A.........C...A........G................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  F  I  S  A  S  G  H  D  I  S  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6165   91   AGTGGCTTTCATTCATTAGTGCTAGTGGACATGACATCTCCTACGCAGAGTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  91.2% (227/249)  IGHV3-11*01  137  .....G......A.......AG......TAG.AC...A.A.........C........................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  R  G  A  G  I  A  L  W  
                    Query_6165   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCCGTGTATTATTGTGCGAGAGGGGCGGGTATTGCATTATGGT  270
V  91.2% (227/249)  IGHV3-11*01  227  ....C...............................C.....................C..........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD6-13*01  1    -------------------------------------------------------------------------......A...-------  10
J  95.7% (44/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------------.  6

                                      ---------->                                  
                                      W  F  D  P  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_6165   271  GGTTCGACCCCTGGGGCCAGGGAACGCAGGTCACCGTCTCCTCAG  315
J  95.7% (44/46)    IGHJ5*02     7    .........................C.T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_155996

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           262     4e-72
IGHD7-27*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD7-27*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGACAAGGGG	ACTGGGGA	N/A	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAAGGGGACTGGGGATGGTACTTCGATCTC	ARRQGDWGWYFDL	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	62	33	26	4	3	78.8
FR2-IMGT	63	113	51	44	7	0	86.3
CDR2-IMGT	114	131	21	12	6	3	57.1
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	251	213	32	6	84.9


Alignments

                                      <--------FR1-IMGT--------><-----------CDR1-IMGT-----------><--------------------FR2-IMGT--
                                         L  R  L  S  C  T  V  S  G  V  S  I  S  S  S  A  G  H  Y  W  S  W  I  R  Q  T  P  G  K  
                    Query_6166   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGTCTCCATCAGCAGCAGTGCTGGTCACTATTGGAGTTGGATCCGCCAGACCCCCGGAAAGG  93
V  84.9% (213/251)  IGHV4-31*03  50   .....TCC...A..................G............---..G....T....C.....C............CA...A..G....  136
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S     G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  

                                      -------------------><-----CDR2-IMGT-----><------------------------------------------------
                                      G  L  E  W  M  G  Y  I  F  Y  T  V     P  Y  Y  N  P  S  L  K  S  R  L  T  M  S  G  D  T  
                    Query_6166   94   GCCTGGAGTGGATGGGTTACATCTTTTATACTGTGC---CATACTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCAGGAGACACCG  180
V  84.9% (213/251)  IGHV4-31*03  137  .............T..G.......A...C.G..G.AGCA.C..............C............G.T.....A....T......GT  226
                                      G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  

                                      ----FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT-
                                      A  K  N  Q  F  S  L  R  L  T  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  R  Q  G  D  W  G  
                    Query_6166   181  CTAAGAACCAGTTTTCCCTGAGGCTGACCTCTGTGACTTCCGCGGACACGGCCGTGTATTACTGTGCGAGACGACAAGGGGACTGGGGAT  270
V  84.9% (213/251)  IGHV4-31*03  227  .............C.......A.....G..........G................................-------------------  297
                                      S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                    
D  100.0% (8/8)     IGHD7-27*01  4    ---------------------------------------------------------------------------------........-  11
J  98.0% (48/49)    IGHJ2*01     5    -----------------------------------------------------------------------------------------.  5

                                      ------------->                                  
                                      W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6166   271  GGTACTTCGATCTCTGGGGCCGCGGCACCCTGGTCACTGTCTCCTCAG  318
J  98.0% (48/49)    IGHJ2*01     6    ......................T.........................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_234436

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           325     3e-91
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGCG	GGCTGG	G	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCTGGGAACTGGTTCGACCCC	ARGRRAGNWFDP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  V  P  G  K  G 
                    Query_6167   1    ACCCTGTCCCTCACCTGCAGTGTCTCAGGTGGCTCCATCAGTAGTGGGGCTTACTACTGGAGTTGGATCCGCCAGGTCCCAGGGAAGGGC  90
V  91.6% (229/250)  IGHV4-31*01  49   ...................C......T..............C.....T.G............C............CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  E  N  T  Q  Y  N  P  S  L  K  S  L  V  T  I  S  G  D  T  S 
                    Query_6167   91   CTGGAGTGGATTGGATACATCTATTACGGTGAGAATACCCAGTACAACCCGTCCCTCAAGAGTCTGGTTACCATATCAGGAGACACCTCT  180
V  91.6% (229/250)  IGHV4-31*01  139  ..............G............A...G..GC...T.C.......................A.............T......G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       T  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  W 
                    Query_6167   181  ACGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCTGGGAACTGG  270
V  91.6% (229/250)  IGHV4-31*01  229  .A.................A.................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------......-------  18
J  93.9% (46/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  D  P  W  G  H  G  I  L  V  T  V  T  S  
                    Query_6167   271  TTCGACCCCTGGGGCCACGGAATCCTGGTCACCGTCACCTCAG  313
J  93.9% (46/49)    IGHJ5*02     9    .................G....C.............T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_127498

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*04                                                                                           350     8e-99
IGHD1-20*01                                                                                           14.1    8.6  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*04	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTAAACCGGGATCGT	GGTATAA	AGGCTACG	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAAACCGGGATCGTGGTATAAAGGCTACGACTGCTTTGACTAC	ARLKPGSWYKGYDCFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  D  C  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6168   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACTGACTGCTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-11*04  47   ..........................................G.....A.............A...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  Y  I  S  S  S  G  R  T  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_6168   91   AGTGGGTTGCATACATTAGTAGTAGTGGTCGTACCAAATACTACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCCGGGACGACGCCA  180
V  95.2% (236/248)  IGHV3-11*04  137  ........T....................A......T...........................A............A.....A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  L  K  P  G  S  W  Y  
                    Query_6168   181  AGAACTCCGTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGACTTAAACCGGGATCGTGGTATA  270
V  95.2% (236/248)  IGHV3-11*04  227  .......AC.....C.....................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-20*01  1    ------------------------------------------------------------------------------------......  6

                                      GT-------------------->                                  
                                      K  G  Y  D  C  F  D  Y  W  G  P  G  T  L  V  S  V  S  S  
                    Query_6168   271  AAGGCTACGACTGCTTTGACTACTGGGGCCCGGGAACCCTGGTCAGCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD1-20*01  7    .--------------------------------------------------------  7
J  93.8% (45/48)    IGHJ4*02     1    ---------...A.................A..............C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_127499

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           266     2e-73
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ3*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ3*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGCCCCATT	TTACTATGATAGTCGTGGTT	TTCACCA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGCCCCATTTTACTATGATAGTCGTGGTTTTCACCATGATGTCTTTGATCTG	PDGPHFTMIVVVFTMMSLI	237	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	26	27	25	1	1	92.6
CDR1-IMGT	27	50	24	18	6	0	75
FR2-IMGT	51	101	51	45	6	0	88.2
CDR2-IMGT	102	122	21	16	5	0	76.2
FR3-IMGT	123	236	114	99	15	0	86.8
CDR3-IMGT (germline)	237	243	7	6	1	0	85.7
Total	N/A	N/A	244	209	34	1	85.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L   P  A  L  S  L  V  A  P  L  L  A  P  T  G  T  G  S  G  S  P  Q  V  W  D  W  S
                    Query_6169   1    ACCCTGTCCCT-ACCTGCACTCTCTCTGGTGGCCCCATTACTGGCTCCTACTGGAACTGGTTCCGGCAGTCCCCAGGTATGGGACTGGAG  89
V  85.7% (209/244)  IGHV4-59*08  49   ...........C.........G...........T....C.G.A.T.A........G....A........C.......G.A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                        G  L  A  M  S  T  T  L  G  P  P  T  T  T  P  R  S  R  V  E  S  P  F  Q  W  T  R  P  R  R
                    Query_6169   90   TGGATTGGCTATGTCTACTACACTGGGGCCACCTACTACAACCCCTCGTTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGACG  179
V  85.7% (209/244)  IGHV4-59*08  139  ........G...A....T....G....AG....A.............CC...................A.....A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                        S  L  P  *  T  *  V  L  S  P  P  Q  T  R  P  S  I  S  V  P  D  G  P  H  F  T  M  I  V  V
                    Query_6169   180  CAGTTTACCCTGAACTTGAGTTCTGTCACCGCCGCAGACACGGCCGTCTATTTCTGTGCCAGACGGGCCCCATTTTACTATGATAGTCGT  269
V  85.7% (209/244)  IGHV4-59*08  229  .....CT.......GC....C.....G....................G....A......G....--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.0% (19/20)    IGHD3-22*01  4    --------------------------------------------------------------------------.............A..  19

                                      GT------------------------>                                  
                                        V  F  T  M  M  S  L  I  C  G  A  K  G  H  W  S  P  S  L  Q 
                    Query_6169   270  GGTTTTCACCATGATGTCTTTGATCTGTGGGGCCAAGGGACATTGGTCACCGTCTCTTCAG  330
D  95.0% (19/20)    IGHD3-22*01  20   ....---------------------------------------------------------  23
J  90.0% (45/50)    IGHJ3*01     1    -----------.....CT......G.C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_140293

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           294     6e-82
IGHD2-8*01                                                                                            14.1    8.1  
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-8*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCGGAC	AATGGTG	G	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCGCGGACAATGGTGGTTTGATATG	VRDRGQWWFDM	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  V  F  N  V  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6170   1    GGTCCCTGAGACTCTCCTGTGCAGGCAGTGGATTCGTCTTCAATGTTTATGGCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  87.6% (219/250)  IGHV3-21*01  47   ........................C.TC.......AC.....G.AGC...A.......C..........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  V  D  S  N  F  K  Y  Y  G  D  S  M  K  G  R  F  T  I  S  R  D  N  P  
                    Query_6170   91   AGTGGGTCTCATCCATTAGTGTTGACAGTAATTTCAAGTACTACGGAGACTCAATGAAGGGCCGATTCACCATCTCCAGAGACAACCCCA  180
V  87.6% (219/250)  IGHV3-21*01  137  ....................AG.AGT....G..A..TA.......C.......G................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  I  D  S  L  R  A  E  D  T  A  V  Y  F  C  V  R  D  R  G  Q  W  W  F  
                    Query_6170   181  AGAACTCACTGTATCTGCAAATCGATAGCCTGAGAGCCGAGGACACGGCTGTCTATTTTTGTGTGAGAGATCGCGGACAATGGTGGTTTG  270
V  87.6% (219/250)  IGHV3-21*01  227  ......................GA.C..........................G....AC....C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-8*01   14   ------------------------------------------------------------------------------.......-----  20
J  95.3% (41/43)    IGHJ3*02     8    --------------------------------------------------------------------------------------....  11

                                      ---->                                  
                                      D  M  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6170   271  ATATGTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  309
J  95.3% (41/43)    IGHJ3*02     12   ....C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_127490

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           308     4e-86
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTGG	AGCAGTGGCTGGT	CGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTGGAGCAGTGGCTGGTCGGTTTGACTTC	AREGGAVAGRFDF	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	224	27	0	89.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  R  G  S  V  S  S  G  G  Y  H  W  S  W  I  R  Q  T  P  G  R  G 
                    Query_6171   1    ACCCTGTCCCTCACCTGCTCTGTCTCTCGTGGCTCCGTCAGCAGTGGGGGTTATCACTGGTCCTGGATCCGGCAGACCCCAGGCAGGGGA  90
V  89.2% (224/251)  IGHV4-61*08  49   ..................A........G...................T.....CT.....AG.............C.......G.A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  F  T  G  T  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  A  D  M  S 
                    Query_6171   91   CTGGAGTGGATTGGCTATATCCACTTCACTGGGACCACCAAGTACAACCCCTCCCTTAAGAGTCGAGTCAGCATATCAGCAGACATGTCC  180
V  89.2% (224/251)  IGHV4-61*08  139  ..............G......T.T.A..G.....G......C..............C.............C........T.....C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  A  V  A  G 
                    Query_6171   181  AAGAACCAATTCTCCCTGAACCTGAGGTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTGCGAGAGAGGGTGGAGCAGTGGCTGGT  270
V  89.2% (224/251)  IGHV4-61*08  229  ........G...........G.....C..........................G..T..C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD6-19*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------->                                  
                                       R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6171   271  CGGTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02     6    ---.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_127491

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           265     5e-73
IGHD3-16*01                                                                                           18.0    0.61 
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACAACG	TATGCTTAT	GTCAGTGCTTGGGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAACGTATGCTTATGTCAGTGCTTGGGGATGATGCTTTTGATGTC	ARRQRMLMSVLGDDAFDV	246	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	23	7	0	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	97	17	0	85.1
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	209	40	0	83.9


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  V  T  T  T  R  Y  S  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_6172   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTCCGTCACCACTACTAGATACTCCTGGGGTTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  83.9% (209/249)  IGHV4-39*01  50   .....TCC...A....C.............G....A...G..G..G...T....A......C..........................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Q  M  F  Y  G  G  S  T  Y  Q  N  P  S  L  N  S  R  V  T  V  S  V  D  P  S  
                    Query_6172   94   TGGAATGGATTGGGCAGATGTTCTATGGTGGGAGCACGTACCAGAACCCGTCGCTGAATAGTCGAGTCACCGTGTCCGTTGACCCGTCCA  183
V  83.9% (209/249)  IGHV4-39*01  140  ....G.........AGT..C.AT...A..........C...T.C........C..C..G............A.A.....A...A......  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  S  Q  F  F  L  N  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  R  Q  R  M  L  M  S  
                    Query_6172   184  AGAGTCAGTTCTTCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCTGTATATTATTGTGCGAGACGACAACGTATGCTTATGTCAG  273
V  83.9% (209/249)  IGHV4-39*01  230  ...AC.......C......G....G...................A.......G.....C..........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD3-16*01  26   ----------------------------------------------------------------------------.........-----  34

                                      IMGT--------------------->                                  
                                      V  L  G  D  D  A  F  D  V  W  G  Q  G  T  G  V  T  V  S  S  
                    Query_6172   274  TGCTTGGGGATGATGCTTTTGATGTCTGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  333
J  96.0% (48/50)    IGHJ3*01     1    ----------...............................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_335035

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           392     2e-111
IGHD5-18*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCCTTGTTGGCCTTGCA	GTGGATAC	TATTTTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCCTTGTTGGCCTTGCAGTGGATACTATTTTCTGACTAT	ARAPLLALQWILFSDY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  S  S  I  S  S  Y 
                    Query_6173   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTCTTCCATTAGCAGTTAT  91
V  93.4% (270/289)  IGHV1-18*01  7    .........................................................................ACA..T...C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  A  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  T  A  Y  N  G  K  T  N  Y  A  Q 
                    Query_6173   92   GGAGTCGCCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCACCGCTTATAATGGTAAAACAAACTATGCACAG  181
V  93.4% (270/289)  IGHV1-18*01  97   ..TA..AG...........................G......................G......C........C...............  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_6173   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  93.4% (270/289)  IGHV1-18*01  187  ...C........................................................C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       I  Y  Y  C  A  R  A  P  L  L  A  L  Q  W  I  L  F  S  D  Y  W  G  Q  G  T  P  V  T  V  S 
                    Query_6173   272  ATTTATTATTGTGCGAGAGCCCCCTTGTTGGCCTTGCAGTGGATACTATTTTCTGACTATTGGGGCCAGGGAACCCCGGTCACCGTCTCC  361
V  93.4% (270/289)  IGHV1-18*01  277  G.G.....C..........-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (8/8)     IGHD5-18*01  1    --------------------------------------........--------------------------------------------  8
J  95.1% (39/41)    IGHJ4*02     8    -----------------------------------------------------......C................T.............  44

                                          
                                       S  
                    Query_6173   362  TCAG  365
J  95.1% (39/41)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_127493

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         427     1e-121
IGHD3-22*01                                                                                           19.9    0.18  
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CCCCCC	TACTCTCATAGCAGTGGTT	CCTACCCTTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACCCCCCTACTCTCATAGCAGTGGTTCCTACCCTTATGATGCTTTTCATATC	AGPPYSHSSGSYPYDAFHI	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  R  I  S  C  K  G  S  G  F  S  F  A  S  Y
                    Query_6174     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGACTCTCTGAGGATCTCCTGTAAGGGTTCTGGATTCAGCTTTGCCAGCTA  90
V  97.2% (281/289)  IGHV5-10-1*01  6    ..........................................G...............................A.......A.......  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  T  Y  S  Y  T  N  Y  S  P
                    Query_6174     91   CTGGATCAGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTACTTACTCTTATACCAACTACAGCCC  180
V  97.2% (281/289)  IGHV5-10-1*01  96   .........C.......................................................G.G......................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6174     181  GTCCTTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCATCACCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.2% (281/289)  IGHV5-10-1*01  186  ............................................G.............................................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------------CDR3-IMGT----------------------->                    
                                          M  Y  Y  C  A  G  P  P  Y  S  H  S  S  G  S  Y  P  Y  D  A  F  H  I  W  G  Q  G  T  M  V
                    Query_6174     271  CATGTATTACTGTGCGGGACCCCCCTACTCTCATAGCAGTGGTTCCTACCCTTATGATGCTTTTCATATCTGGGGCCAAGGGACAATGGT  360
V  97.2% (281/289)  IGHV5-10-1*01  276  ................A..-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  84.2% (16/19)    IGHD3-22*01    5    -------------------------....A.G....T.......----------------------------------------------  23
J  98.0% (49/50)    IGHJ3*02       1    ------------------------------------------------------..........G.........................  36

                                                      
                                          T  V  S  S  
                    Query_6174     361  CACCGTCTCTTCAG  374
J  98.0% (49/50)    IGHJ3*02       37   ..............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_127494

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           357     1e-100
IGHD3-3*01                                                                                            21.8    0.041 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGCCTCGTGCCTG	GGAGTGGTTAT	GAAGCCATACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGCCTCGTGCCTGGGAGTGGTTATGAAGCCATACCTGACTAC	AKSLVPGSGYEAIPDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6175   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTTAGCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-23*01  47   ......................................T..................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  D  T  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6175   91   AATGGGTCTCAGGTATTAGTGGTAGTGGTGGTGACACATACTACGCAGACGCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (238/248)  IGHV3-23*01  137  .G..........C...................AG................T.......................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  F  C  A  K  S  L  V  P  G  S  G  
                    Query_6175   181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTATATTTCTGTGCGAAAAGCCTCGTGCCTGGGAGTGGTT  270
V  96.0% (238/248)  IGHV3-23*01  227  ...A................................C....................A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD3-3*01   15   ---------------------------------------------------------------------------------.........  23

                                      T------------------>                                
                                      Y  E  A  I  P  D  Y  G  G  Q  G  T  L  V  T  V  S  S
                    Query_6175   271  ATGAAGCCATACCTGACTACGGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  322
D  100.0% (11/11)   IGHD3-3*01   24   ..--------------------------------------------------  25
J  97.4% (38/39)    IGHJ4*02     8    -------------.......T...............................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_127495

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATTTAGTAACCCCTGGGAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACCCCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	100	14	0	87.7
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_6176   1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.0% (214/246)  IGHV4-4*01   49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_6176   91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.0% (214/246)  IGHV4-4*01   139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  A  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_6176   181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGCGTATTTCTGTGCGGGACATTTAGTAACCCCTGGGACTCGG  270
V  87.0% (214/246)  IGHV4-4*01   229  ..C.............AG...A.C...G.....G...............T.....G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_6176   271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  93.0% (40/43)    IGHJ4*02     6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_127496

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           353     9e-100
IGHD6-19*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGCAGGA	AGTGGCTGG	CCCCGGGGTCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGCAGGAAGTGGCTGGCCCCGGGGTCATTTTGACTAC	ARVAGSGWPRGHFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_6177   1    ACCCTGTCCCTCACCTGCACTGTCTCCGGTGGATCCGTCAGCAGTAGTAGTTACTATTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGA  90
V  95.2% (238/250)  IGHV4-61*01  49   ..........................T.....C............G..........C.......................A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  E  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S 
                    Query_6177   91   CTGGAGTGGATTGAGTATATCTATTACAGGGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCGTATCAGTCGACACGTCC  180
V  95.2% (238/250)  IGHV4-61*01  139  .............G...............T....G.....................................A.......A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  A  G  S  G  W  P 
                    Query_6177   181  AAGAACCAGTTCTCCCTGAAACTGAGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTAGCAGGAAGTGGCTGGCCC  270
V  95.2% (238/250)  IGHV4-61*01  229  ....................G.....C...........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD6-19*01  10   ------------------------------------------------------------------------------.........---  18

                                      ----------------->                                
                                       R  G  H  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S
                    Query_6177   271  CGGGGTCATTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTC  320
J  97.6% (40/41)    IGHJ4*02     6    ---------......................C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_127497

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           330     1e-92
IGHD1-1*01                                                                                            10.3    123  
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGGGAAACGTAGGGATGCC	TACAA	TCGTC	GATGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGAAACGTAGGGATGCCTACAATCGTCGATGTTTTTGATGTC	ARMGNVGMPTIVDVFDV	242	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	25	21	20	1	0	95.2
CDR1-IMGT	26	55	30	29	1	0	96.7
FR2-IMGT	56	106	51	48	3	0	94.1
CDR2-IMGT	107	127	21	18	3	0	85.7
FR3-IMGT	128	241	114	106	8	0	93
CDR3-IMGT (germline)	242	247	6	6	0	0	100
Total	N/A	N/A	243	227	16	0	93.4


Alignments

                                      <-----FR1-IMGT------><----------CDR1-IMGT---------><--------------------FR2-IMGT----------
                                       S  L  T  C  S  V  S  G  G  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  L  E 
                    Query_6178   5    TCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAG  94
V  93.4% (227/243)  IGHV4-31*03  55   .............C.....................C......................................................  144
                                       S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Q  I  Y  H  T  G  S  S  D  Y  S  P  S  L  K  S  R  L  T  I  A  V  D  T  S  K  N 
                    Query_6178   95   TGGATCGGGCAAATCTATCACACTGGGAGCAGCGACTACAGCCCGTCCCTCAAGAGTCGACTTACCATAGCTGTAGACACGTCTAAGAAC  184
V  93.4% (227/243)  IGHV4-31*03  145  .....T...T.C......T...G........C.T......A...................G........T.A..................  234
                                       W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  M  G  N  V  G  M  P  T  I 
                    Query_6178   185  CAGTTCTCCCTGAACCTGAGTTCTGTGACGGCCGCGGACACGGCCGTGTATTACTGTGCGAGAATGGGAAACGTAGGGATGCCTACAATC  274
V  93.4% (227/243)  IGHV4-31*03  235  ..............G.....C........T.................................---------------------------  297
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD1-1*01   3    -----------------------------------------------------------------------------------.....--  7

                                      ----------------->                                  
                                       V  D  V  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6178   275  GTCGATGTTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  326
J  98.0% (48/49)    IGHJ3*01     2    ---....C............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_126729

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           371     6e-105
IGHD6-25*01                                                                                           12.2    31    
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTTGGGCCC	GCGGCT	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTTGGGCCCGCGGCTGGTATGGACGTC	ARDVGPAAGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  M  R  S  G  G  Y  Y  W  S  W  I  R  Q  R  P  G  K  G 
                    Query_6179   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATGAGGAGTGGTGGATACTACTGGAGCTGGATCCGCCAGCGCCCAGGGAAGGGC  90
V  97.2% (244/251)  IGHV4-31*01  49   ...............................G......C..C........T.........................A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  I  D  T  S 
                    Query_6179   91   CTGGAGTGGATTGGGAACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAATAGACACGTCT  180
V  97.2% (244/251)  IGHV4-31*01  139  ...............T..............................................................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  V  G  P  A  A  G 
                    Query_6179   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGTTGGGCCCGCGGCTGGT  270
V  97.2% (244/251)  IGHV4-31*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD6-25*01  11   ---------------------------------------------------------------------------------......---  16
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6179   271  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  312
J  100.0% (45/45)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_186369

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCAC	ARAPPFDYDLDVRGIHNFDH	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_6180   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  94.7% (230/243)  IGHV4-59*01  50   .....TCC...A..............................G...............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  G  
                    Query_6180   94   GGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGGGCC  183
V  94.7% (230/243)  IGHV4-59*01  140  .........A.................G.............................................A............AA..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D  
                    Query_6180   184  AGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGACG  273
V  94.7% (230/243)  IGHV4-59*01  230  .................AG...........................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD3-22*01  6    ---------------------------------------------------------------------------........-------  13

                                      T------------------------>                                  
                                      V  R  G  I  H  N  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6180   274  TAAGGGGAATCCACAACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
J  97.8% (44/45)    IGHJ4*02     4    ---------------........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_186368

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           363     1e-102
IGHD6-19*01                                                                                           21.8    0.040 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCAGG	GCAGTGGCTGG	CACG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTC	ARVPGQWLARGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6181   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (239/246)  IGHV3-53*01  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  M  Y  S  G  G  T  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_6181   91   AGTGGGTCTCAGTTATGTATAGCGGTGGGACCACATACTACGCAGAGTCCGTGAAGGGCCGATTCACCATCTCAAGAGACAATTCCAAGA  180
V  97.2% (239/246)  IGHV3-53*01  137  ................T...........T.G...............C..........................C................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  G  Q  W  L  A  R  
                    Query_6181   181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGTCCCAGGGCAGTGGCTGGCACGCG  270
V  97.2% (239/246)  IGHV3-53*01  227  ..................................................................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD6-19*01  8    -------------------------------------------------------------------------...........------  18
J  97.8% (45/46)    IGHJ6*02     17   ----------------------------------------------------------------------------------------..  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_6181   271  GTATGGACGTCTGGGGCCAAGGGACCGCGGTCACCGTCTCCTCA  314
J  97.8% (45/46)    IGHJ6*02     19   ..........................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_51852

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           325     3e-91
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	AGTGGC	TACTATGACACTAGTGGT	GACATTCC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGTGGCTACTATGACACTAGTGGTGACATTCCCAACTGGTTCGACCCC	SGYYDTSGDIPNWFDP	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	109	5	0	95.6
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  R  R  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_6182   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCGTCAGCCGTCGTAATTACTATTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  93.0% (225/242)  IGHV4-61*01  50   .....TCC...A.............................A..G...G......C.....C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  R  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  
                    Query_6182   94   TGGAGTGGATTGGATATATCTATTACCGTGGGACCACCAACTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCCA  183
V  93.0% (225/242)  IGHV4-61*01  140  .............G............A......G............C..............................G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  T  Y  Y  C  S  G  Y  Y  D  T  S  G  D  
                    Query_6182   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCACTTATTACTGTAGTGGCTACTATGACACTAGTGGTGACA  273
V  93.0% (225/242)  IGHV4-61*01  230  ..................................................GTG.........----------------------------  291
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                             
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------........T.G.......----  22

                                      T------------------>                                  
                                      I  P  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6182   274  TTCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (50/50)   IGHJ5*02     2    ----..................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_126721

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            374     8e-106
IGHD3-22*01                                                                                           39.1    3e-07 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	CG	TTACTATGATAGTAGTGGTT	CAGACCACACCCCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAAAGATCGTTACTATGATAGTAGTGGTTCAGACCACACCCCTCTTGACTAC	VKDRYYDSSGSDHTPLDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	251	9	8	1	0	88.9
Total	N/A	N/A	251	245	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6183   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGGCATGAACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  97.6% (245/251)  IGHV3-9*01   47   ...................................................C....C.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  N  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6183   91   AGTGGGTCTCAGGTATCAGTTGGAATAGTGGTAACATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (245/251)  IGHV3-9*01   137  ................T................G........................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  D  R  Y  Y  D  S  S  
                    Query_6183   181  AGAAGTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGTAAAAGATCGTTACTATGATAGTAGTG  270
V  97.6% (245/251)  IGHV3-9*01   227  ....C..........................................................C.......-------------------  297
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (20/20)   IGHD3-22*01  4    -------------------------------------------------------------------------.................  20

                                      IMGT--------------------->                                  
                                      G  S  D  H  T  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6183   271  GTTCAGACCACACCCCTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (20/20)   IGHD3-22*01  21   ...---------------------------------------------------------  23
J  100.0% (42/42)   IGHJ4*02     7    ------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_186362

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           19.9    0.15 
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	TTCG	CTATGTTTCGGGG	TTCAGGG	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCATTCGCTATGTTTCGGGGTTCAGGGGGTATGGACGTC	AFAMFRGSGGMDV	239	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	24	0	0	100
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	23	1	0	95.8
FR3-IMGT	125	238	114	111	3	0	97.4
CDR3-IMGT (germline)	239	241	3	3	0	0	100
Total	N/A	N/A	228	224	4	0	98.2


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I 
                    Query_6184   14   TGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGTATT  103
V  98.2% (224/228)  IGHV3-74*01  64   ..........................................................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       K  S  D  G  S  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 
                    Query_6184   104  AAGAGTGATGGGAGTAGCACATACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACACTGTATCTG  193
V  98.2% (224/228)  IGHV3-74*01  154  ..T..................AG.........................................................G.........  243
                                       N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------CDR3-IMGT-------------->      
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  F  A  M  F  R  G  S  G  G  M  D  V  W  G 
                    Query_6184   194  CAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCATTCGCTATGTTTCGGGGTTCAGGGGGTATGGACGTCTGGGGC  283
V  98.2% (224/228)  IGHV3-74*01  244  ................................................------------------------------------------  291
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  92.3% (12/13)    IGHD3-10*01  7    ----------------------------------------------------.....G.......-------------------------  19
J  100.0% (45/45)   IGHJ6*02     18   ------------------------------------------------------------------------..................  35

                                                                 
                                       Q  G  T  T  V  T  V  S  S 
                    Query_6184   284  CAAGGGACCACGGTCACCGTCTCCTCA  310
J  100.0% (45/45)   IGHJ6*02     36   ...........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_126723

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            358     3e-101
IGHD6-19*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGGGAG	GCAGTGGC	CCCGGGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGGGAGGCAGTGGCCCCGGGGAC	ARAPGGSGPGD	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	111	3	0	97.4
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  T  S  N  L  W  T  W  V  R  Q  P  P  E  K  G  L 
                    Query_6185   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGTACTAGTAACTTGTGGACTTGGGTCCGCCAGCCCCCAGAAAAGGGGCTG  90
V  96.4% (238/247)  IGHV4-4*02   49   .........................................C.G........G.....G....................GG.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  K  S  K 
                    Query_6185   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAATAGACAAGTCCAAG  180
V  96.4% (238/247)  IGHV4-4*02   139  ...........................................................................G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  A  P  G  G  S  G  P  G 
                    Query_6185   181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCATCTATTACTGTGCGAGAGCCCCGGGAGGCAGTGGCCCCGGG  270
V  96.4% (238/247)  IGHV4-4*02   229  ................................................G.G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD6-19*01  8    ----------------------------------------------------------------------------........------  15

                                      -->                                  
                                       D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6185   271  GACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (36/36)   IGHJ4*02     13   -....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_186360

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           367     6e-104
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TAGATCGGCAGTATAACCATGGGAC	TAGTGGTTATTA	TCTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTAGATCGGCAGTATAACCATGGGACTAGTGGTTATTATCTCGACTAC	AKVDRQYNHGTSGYYLDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6186   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-48*03  47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  A  G  S  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6186   91   AGTGGGTTTCATACATTAGTAGTAGTGCTGGTTCCAAATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (242/249)  IGHV3-48*03  137  ...........................G.A..A...T.....................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  V  D  R  Q  Y  N  H  
                    Query_6186   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAAAGTAGATCGGCAGTATAACCATG  270
V  97.2% (242/249)  IGHV3-48*03  227  ............A.....................................................G..---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      IMGT--------------------->                                
                                      G  T  S  G  Y  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6186   271  GGACTAGTGGTTATTATCTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  328
D  100.0% (12/12)   IGHD3-22*01  16   ----............------------------------------------------  27
J  100.0% (38/38)   IGHJ4*02     9    --------------------......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_126725

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           336     1e-94
IGHD1-26*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GGG	GGGAGCTACT	CTCCTTTT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGGGGGGAGCTACTCTCCTTTTTGCTTTTGATATC	VKGGATLLFAFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  M  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6187   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAATATGTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTAG  90
V  93.5% (231/247)  IGHV3-64*05  47   ..........................................G..GC.........................................G.  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  V  S  S  I  T  S  N  A  E  S  T  Y  Y  T  D  S  V  K  D  R  F  T  I  S  R  D  N  S  
                    Query_6187   91   AATCTGTCTCCTCTATTACTAGTAATGCGGAGAGCACATACTACACAGACTCAGTGAAGGACAGATTCACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-64*05  137  ...A...T..AG......G........G..GT............G...............G.............................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  G  G  A  T  L  L  F  
                    Query_6187   181  AGAACACGCTGTATCTTCAAATGAGCAGTCTGAGACCTGAGGACACGGCTGTGTATTACTGTGTGAAGGGGGGAGCTACTCTCCTTTTTG  270
V  93.5% (231/247)  IGHV3-64*05  227  ..............G....................G...............................-----------------------  293
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V                          
D  100.0% (10/10)   IGHD1-26*01  9    ----------------------------------------------------------------------..........----------  18
J  97.9% (46/47)    IGHJ3*02     4    ----------------------------------------------------------------------------------------..  5

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_6187   271  CTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  315
J  97.9% (46/47)    IGHJ3*02     6    ..........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_186366

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            391     5e-111
IGHD6-13*01                                                                                           14.1    8.9   
IGHJ5*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	CAACTTCCCAAC	TATAGCA	CCCGCG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGCAACTTCCCAACTATAGCACCCGCGTGGTTCGACCCC	AHSNFPTIAPAWFDP	263	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	47	4	0	92.2
CDR2-IMGT	128	148	21	20	1	0	95.2
FR3-IMGT	149	262	114	111	3	0	97.4
CDR3-IMGT (germline)	263	270	8	8	0	0	100
Total	N/A	N/A	270	260	10	0	96.3


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  S  S  G  V  G  V  G  W  I  R
                    Query_6188   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGTAGTAGTGGAGTGGGTGTGGGCTGGATCCG  90
V  96.3% (260/270)  IGHV2-5*01   30   ............................................................C.C...........................  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  S  P  G  K  A  L  E  W  L  G  L  I  Y  W  N  D  E  K  R  Y  S  P  S  L  R  S  R  L  T
                    Query_6188   91   TCAGTCCCCAGGAAAGGCCCTGGAGTGGCTAGGTCTCATTTATTGGAATGATGAGAAGCGATACAGCCCATCTCTGAGGAGCAGGCTCAC  180
V  96.3% (260/270)  IGHV2-5*01   120  ....C.........................T.CA....................T.....C................A............  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        F  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  S
                    Query_6188   181  CTTCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAG  270
V  96.3% (260/270)  IGHV2-5*01   210  .A........................................................................................  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                      ----------CDR3-IMGT----------------->                                  
                                        N  F  P  T  I  A  P  A  W  F  D  P  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_6188   271  CAACTTCCCAACTATAGCACCCGCGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  341
D  100.0% (7/7)     IGHD6-13*01  4    ------------.......----------------------------------------------------  10
J  97.8% (45/46)    IGHJ5*02     6    -------------------------.................................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_126727

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           361     4e-102
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACTGGC	ATATTGTAGTGGTATGAGCTGC	ACCTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACTGGCATATTGTAGTGGTATGAGCTGCACCTCTTACTACTACGCTATGGACGTC	ARVLAYCSGMSCTSYYYAMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6189   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-33*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  N  N  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6189   91   AGTGGGTGGCTGTTATATGGTATGATGGAAATAATAAATACTATGGAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAACTCCA  180
V  96.4% (240/249)  IGHV3-33*01  137  ..........A...................G..............C..................A....................T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  L  A  Y  C  S  G  
                    Query_6189   181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTTTATTACTGTGCGAGAGTACTGGCATATTGTAGTGGTA  270
V  96.4% (240/249)  IGHV3-33*01  227  ..............C......................C..............G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.4% (19/22)    IGHD2-2*01   4    ----------------------------------------------------------------------------..........A...  17

                                      DR3-IMGT-------------------------->                                 
                                      M  S  C  T  S  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6189   271  TGAGCTGCACCTCTTACTACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  338
D  86.4% (19/22)    IGHD2-2*01   18   CC......------------------------------------------------------------  25
J  98.1% (53/54)    IGHJ6*02     9    --------------..........G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_287976

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCTACGAGGCGAGTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATATCTACGAGGCGAGTCATCAATATAGTGGCTACATGATTAATGACTAC	GKDIYEASHQYSGYMINDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6190   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGATATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-23*01  47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  G  I  S  E  S  G  G  S  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6190   91   ATTGGGTCTCAGGAATTAGTGAAAGTGGTGGTAGCACAAACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  94.8% (237/250)  IGHV3-23*01  137  .G..........CT.......GT...............T...............................................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  I  S  L  R  A  E  D  T  A  V  Y  Y  C  G  K  D  I  Y  E  A  S  H  
                    Query_6190   181  AGAACACCCTGTATCTACAAATGATCAGCCTCAGAGCCGAGGACACGGCCGTATATTACTGTGGGAAAGATATCTACGAGGCGAGTCATC  270
V  94.8% (237/250)  IGHV3-23*01  227  .......G........G.......A......G...............................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_6190   271  AATATAGTGGCTACATGATTAATGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  97.6% (40/41)    IGHJ4*02     8    ----------------------.............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_287977

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_6191   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_6191   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_6191   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_6191   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_287970

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           349     2e-98
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GCCTC	TATTACTTTCGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGCCTCTATTACTTTCGTTCGGGGAGTTATTTTGACTTC	ARGLYYFRSGSYFDF	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  N  W  V  R  Q  H  P  G  K  G  
                    Query_6192   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAACTGGGTCCGCCAGCACCCAGGGAAGGGCC  93
V  94.8% (236/249)  IGHV4-31*02  50   .....TCC...A..................G.............................G....A........................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  H  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  F  S  I  S  V  D  T  S  
                    Query_6192   94   TGGAGTGGATTGGGCACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGATTTAGCATTTCAGTAGACACGTCTA  183
V  94.8% (236/249)  IGHV4-31*02  140  ..............T..................G...............................G...C...A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  F  R  S  
                    Query_6192   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGCCTCTATTACTTTCGTTCGG  273
V  94.8% (236/249)  IGHV4-31*02  230  ................................................................G....---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (22/24)    IGHD3-10*01  2    --------------------------------------------------------------------------.......A.G......  17

                                      ---------------->                                  
                                      G  S  Y  F  D  F  W  G  P  G  T  L  V  P  V  S  S  
                    Query_6192   274  GGAGTTATTTTGACTTCTGGGGCCCGGGAACCCTGGTCCCCGTCTCCTCAG  324
D  91.7% (22/24)    IGHD3-10*01  18   ........-------------------------------------------  25
J  93.0% (40/43)    IGHJ4*02     6    --------.......A........A.............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_287971

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_6193   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG..G.T..................................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_6193   91   TGGATTGGATATATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  93.4% (228/244)  IGHV4-59*01  139  ........G...................G.....A............................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W 
                    Query_6193   181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------------------------------------------....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_6193   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (35/35)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_287972

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD2-21*01                                                                                           12.2    37    
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAGCGTTAGGGC	ATTGTG	TTAGAAGCACTTGCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGCGTTAGGGCATTGTGTTAGAAGCACTTGCGACTACGGTATGGACGTC	ATALGHCVRSTCDYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	281	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_6194   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTA  90
V  97.9% (281/287)  IGHV5-51*01  6    ......................................................................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  H  P  G  D  S  D  T  R  Y  S  P
                    Query_6194   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCCATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  97.9% (281/287)  IGHV5-51*01  96   ..........................................................T............................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6194   181  GTCTTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (281/287)  IGHV5-51*01  186  ...C.........................................C....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  T  A  L  G  H  C  V  R  S  T  C  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T
                    Query_6194   271  CATGTATTACTGTGCGACAGCGTTAGGGCATTGTGTTAGAAGCACTTGCGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCAC  360
V  97.9% (281/287)  IGHV5-51*01  276  .................-------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                           
D  100.0% (6/6)     IGHD2-21*01  6    -----------------------------......-------------------------------------------------------  11
J  100.0% (50/50)   IGHJ6*02     13   --------------------------------------------------........................................  52

                                                
                                        V  S  S 
                    Query_6194   361  CGTCTCCTCA  370
J  100.0% (50/50)   IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_287973

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD2-15*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAGTCTGGACC	TGGTGGTA	ACATC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGAGTCTGGACCTGGTGGTAACATCGACTAC	ARHESGPGGNIDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	238	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  S  S  S  Y  Y  W  G  W  V  R  Q  P  P  G  K  G 
                    Query_6195   1    ACCCTGTCCCTCACTTGCACTGTCTCTGGTGCCTCCATCAGCAGTAGTTCTTACTACTGGGGCTGGGTCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (238/251)  IGHV4-39*01  49   ..............C................G................AG................A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  K  S  S  L  K  S  R  V  T  I  S  V  D  T  A 
                    Query_6195   91   CTGGAGTGGATTGGCAGTATCTATTATAGTGGGAGCACCTACTACAAGTCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGGCC  180
V  94.8% (238/251)  IGHV4-39*01  139  ..............G................................CC......................................T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  V  S  S  V  T  A  A  D  T  A  A  Y  Y  C  A  R  H  E  S  G  P  G  G 
                    Query_6195   181  AAGAACCAGTTCTCCCTGAAGGTGAGTTCTGTGACCGCCGCAGACACGGCTGCATATTACTGTGCGAGACATGAGTCTGGACCTGGTGGT  270
V  94.8% (238/251)  IGHV4-39*01  229  .....................C....C.........................TG.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD2-15*01  13   -----------------------------------------------------------------------------------.......  19

                                      ----------->                                  
                                       N  I  D  Y  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_6195   271  AACATCGACTACTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  316
D  100.0% (8/8)     IGHD2-15*01  20   .---------------------------------------------  20
J  97.5% (39/40)    IGHJ4*02     9    ------......................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_287978

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAGGG	AGTAGTGGTTATT	TTAGCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAGGGAGTAGTGGTTATTTTAGCCTC	ARRGSSGYFSL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  K  G  S  D  F  S  F  A  R  N
                    Query_6196   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGATTTCAGTTTTGCCAGGAA  90
V  94.8% (275/290)  IGHV5-51*01  6    ..........................................G............................GA.A...C...A....CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  H  D  S  D  T  R  Y  S  P
                    Query_6196   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTAGAGTGGATGGGGAACATCTATCCTCATGACTCTGATACCAGATACAGCCC  180
V  94.8% (275/290)  IGHV5-51*01  96   .......................................G.............T..........GG........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  T  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6196   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (275/290)  IGHV5-51*01  186  ...................................A.................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        M  Y  Y  C  A  R  R  G  S  S  G  Y  F  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6196   271  CATGTATTATTGTGCGAGACGAGGGAGTAGTGGTTATTTTAGCCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  94.8% (275/290)  IGHV5-51*01  276  .........C..........------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (13/13)   IGHD3-22*01  14   -------------------------.............------------------------------------------  26
J  100.0% (35/35)   IGHJ4*02     14   ---------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_244022

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           369     2e-104
IGHD2-8*01                                                                                            19.9    0.16  
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCATT	TTGAACTAATGCTGTTTGC	CCGAGAG	TACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCATTTTGAACTAATGCTGTTTGCCCGAGAGTACCACTACTACGGTATGGACGTC	ARDHFELMLFAREYHYYGMDV	249	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	113	1	0	99.1
CDR3-IMGT (germline)	249	256	8	6	2	0	75
Total	N/A	N/A	256	246	10	0	96.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  G  S  G  F  T  F  R  D  Y  T  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6197   1    GGTCCCTGAGACTCTCCTGTACAGGTTCTGGATTCACCTTTCGTGATTATACTATGACCTGGGTCCGCCAGGCTCCTGGGAAGGGGCTGG  90
V  96.1% (246/256)  IGHV3-49*04  47   ........................C................G........G......G..................A.............  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  A  F  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  M  S  R  D  
                    Query_6197   91   AGTGGGTAGGTTTCATTAGAAGCAAAGCTTTTGGTGGCACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATGTCAAGAGATG  180
V  96.1% (246/256)  IGHV3-49*04  137  ..............................A......G.........................................C..........  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  D  H  F  E  L  
                    Query_6197   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTGCGAGAGATCATTTTGAACTAA  270
V  96.1% (246/256)  IGHV3-49*04  227  ....................................................................A.T.....--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  84.2% (16/19)    IGHD2-8*01   7    ---------------------------------------------------------------------------------...T.....  15

                                      -----CDR3-IMGT-------------------------->                                 
                                      M  L  F  A  R  E  Y  H  Y  Y  G  M  D  V  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_6197   271  TGCTGTTTGCCCGAGAGTACCACTACTACGGTATGGACGTCTGGGGCCAGGGGACCGCGGTCACCGTCTCCTCA  344
D  84.2% (16/19)    IGHD2-8*01   16   ..G...A...----------------------------------------------------------------  25
J  94.7% (54/57)    IGHJ6*02     6    -----------------...T............................A......A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_67776

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-28*01                                                                                           364     5e-103
IGHD1-26*01                                                                                           14.1    8.3   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-28*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAA	TTGCATCGGTCGCGC	GTGGGAG	T	TACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGCATCGGTCGCGCGTGGGAGTTACGTTGACTAC	ARIASVARGSYVDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	111	3	0	97.4
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  N  N  W  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_6198   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCATCAGCAGTAATAACTGGTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGACTG  90
V  97.2% (240/247)  IGHV4-28*01  49   ..............................................G...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  S  N  W  W  G  W  I  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  S  I  S  Y  T  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K 
                    Query_6198   91   GAGTGGATTGGGTCCATCTCTTATACTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCGTGTCAGTAGACACGTCCAAG  180
V  97.2% (240/247)  IGHV4-28*01  139  .............A.....A.....G...........................................A....................  228
                                       E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  R  S  V  T  A  V  D  T  A  V  Y  F  C  A  R  I  A  S  V  A  R  G  S 
                    Query_6198   181  AACCAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGTGGACACGGCCGTGTATTTCTGTGCGAGAATTGCATCGGTCGCGCGTGGGAGT  270
V  97.2% (240/247)  IGHV4-28*01  229  .......................C...............................A...........-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  V  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD1-26*01  7    ----------------------------------------------------------------------------------.......-  13

                                      ----------->                                  
                                       Y  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6198   271  TACGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.8% (45/46)    IGHJ4*02     3    ...T..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_67775

Length=418
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           394     7e-112
IGHD1-26*01                                                                                           23.8    0.013 
IGHJ6*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGTCTTACGTCCCG	GTGGGAGCTACT	CCCTTAGAAGGGGCCGAGGACA	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGTCTTACGTCCCGGTGGGAGCTACTCCCTTAGAAGGGGCCGAGGACAACGGTATGGACGTC	ARDGSYVPVGATPLEGAEDNGMDV	291	362	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	68	3	0	95.8
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	103	11	0	90.4
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	292	272	20	0	93.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  S  F  T  N  
                    Query_6199   7    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTTTCCTGCAAGGCGTCTGGATACAGCTTCACCAATC  96
V  93.2% (272/292)  IGHV1-46*01  5    ...................G...............................A...............A..........C........GCT  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      H  Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  H  A  
                    Query_6199   97   ACTATGTGCACTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGTCACGCAC  186
V  93.2% (272/292)  IGHV1-46*01  95   .....A...............................G............................................CT......  184
                                      Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  T  T  V  Y  M  E  L  R  G  L  R  S  E  D  T  
                    Query_6199   187  AGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACAACCACAGTGTACATGGAACTACGTGGCCTGAGATCTGAGGACACGG  276
V  93.2% (272/292)  IGHV1-46*01  185  ...........................................G.G......C........G..GA.CA.....................  274
                                      Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-------------------------------CDR3-IMGT------------------------------>    
                                      A  V  Y  Y  C  A  R  D  G  S  Y  V  P  V  G  A  T  P  L  E  G  A  E  D  N  G  M  D  V  W  
                    Query_6199   277  CCGTGTACTACTGTGCGAGAGATGGGTCTTACGTCCCGGTGGGAGCTACTCCCTTAGAAGGGGCCGAGGACAACGGTATGGACGTCTGGG  366
V  93.2% (272/292)  IGHV1-46*01  275  .......T..............--------------------------------------------------------------------  296
                                      A  V  Y  Y  C  A  R                                                                       
D  100.0% (12/12)   IGHD1-26*01  7    --------------------------------------............----------------------------------------  18
J  100.0% (47/47)   IGHJ6*02     16   ------------------------------------------------------------------------..................  33

                                                                   
                                      G  Q  G  T  T  V  T  V  S  S 
                    Query_6199   367  GCCAAGGGACCACGGTCACCGTCTCCTCA  395
J  100.0% (47/47)   IGHJ6*02     34   .............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41024880


Query= Query_67773

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           290     2e-80
IGHD5-12*01                                                                                           12.2    32   
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GTCCCCAGCC	GTGGAT	CGTGCACTGGGATGGAGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGTCCCCAGCCGTGGATCGTGCACTGGGATGGAGGTGCTTTTGATATC	AKGPQPWIVHWDGGAFDI	237	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	47	4	0	92.2
CDR2-IMGT	99	122	24	18	6	0	75
FR3-IMGT	123	236	114	105	9	0	92.1
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	231	208	23	0	90


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  S  A  Y  G  M  N  W  V  R  Q  A  A  G  K  G  L  E  W  L  A  V  I  
                    Query_6200   13   GTACAGCCTCTGGATTCACCTTTAGTGCCTATGGCATGAACTGGGTCCGCCAGGCTGCCGGCAAGGGGCTGGAGTGGCTGGCAGTTATAG  102
V  90.0% (208/231)  IGHV3-30*18  65   ..G...................C...AG..........C.................C.A..................G...........T  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      A  D  D  G  S  E  T  Y  Y  A  D  S  V  Q  G  R  F  S  I  S  R  D  N  S  K  S  T  L  Y  L  
                    Query_6200   103  CAGATGATGGAAGTGAGACCTATTATGCAGACTCCGTGCAGGGCCGATTCTCCATCTCCAGAGACAATTCCAAGAGCACTCTGTATCTGC  192
V  90.0% (208/231)  IGHV3-30*18  155  ..T...........A.T.AA..C...............A...........A........................A...G..........  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><----------------------CDR3-IMGT--------------
                                      Q  M  N  N  L  R  D  E  D  T  A  V  Y  Y  C  A  K  G  P  Q  P  W  I  V  H  W  D  G  G  A  
                    Query_6200   193  AAATGAACAACCTGAGAGATGAGGACACAGCTGTTTATTACTGTGCGAAAGGTCCCCAGCCGTGGATCGTGCACTGGGATGGAGGTGCTT  282
V  90.0% (208/231)  IGHV3-30*18  245  .........G........C.........G.....G................---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (6/6)     IGHD5-12*01  1    -------------------------------------------------------------......-----------------------  6
J  95.7% (45/47)    IGHJ3*02     4    -------------------------------------------------------------------------------------.....  8

                                      ------->                                  
                                      F  D  I  W  G  Q  G  T  R  V  S  V  S  S  
                    Query_6200   283  TTGATATCTGGGGCCAAGGGACAAGGGTCAGCGTCTCTTCAG  324
J  95.7% (45/47)    IGHJ3*02     9    ........................T.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_67770

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            313     1e-87
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ6*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CGG	CTACGGTAACTAC	TTCGCT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCGGCTACGGTAACTACTTCGCTGGTATGGACGTC	AGYGNYFAGMDV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  E  D  Y  A  M  H  W  V  P  Q  A  P  G  K  G  L  
                    Query_6201   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACGTTTGAGGATTATGCCATGCACTGGGTCCCCCAAGCCCCAGGGAAGGGCCTGG  90
V  91.0% (222/244)  IGHV3-9*01   47   ................................T....C.....T......................GG.....T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  R  I  S  W  T  S  G  T  I  D  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  D  A  
                    Query_6201   91   AGTGGGTCGCAAGGATTAGTTGGACGAGTGGAACTATAGACTATGCGGACTCTGTGAAGGGCCGATTCATCATCTCCAGAGACGACGCCA  180
V  91.0% (222/244)  IGHV3-9*01   137  ........T..G.T..........AT.....T.GC....G.............................C.............A......  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  G  Y  G  N  Y  F  A  G  
                    Query_6201   181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGAGAGTTGAAGACACGGCCCTGTATTATTGTGCCGGCTACGGTAACTACTTCGCTGGTA  270
V  91.0% (222/244)  IGHV3-9*01   227  ..........G.........................C...G.........T.......C.....--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  92.3% (12/13)    IGHD4-17*01  4    -------------------------------------------------------------------.......G.....----------  16
J  93.5% (43/46)    IGHJ6*01     18   --------------------------------------------------------------------------------------....  21

                                      ------->                                  
                                      M  D  V  W  G  Q  G  T  T  V  I  V  S  S  
                    Query_6201   271  TGGACGTCTGGGGGCAAGGGACGACGGTCATCGTCTCATCAG  312
J  93.5% (43/46)    IGHJ6*01     22   ......................C.......C......C....  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_224357

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	216	29	0	88.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_6202   1    ACCCTGTCCCTCACCTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  88.2% (216/245)  IGHV4-34*01  49   .......................CTA..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_6202   91   TGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAA  180
V  88.2% (216/245)  IGHV4-34*01  139  ................A............CA.C.AC......C..T......A...............A....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W 
                    Query_6202   181  CAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCTGGCGAAGACAGCGCAACTGG  270
V  88.2% (216/245)  IGHV4-34*01  229  ..GT...........C..A......T.....................G.....C......A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (49/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------.......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6202   271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (49/50)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_224356

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           325     3e-91
IGHD6-19*01                                                                                           14.1    8.3  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-19*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAAGAA	CAGTGGC	GGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGATGAAGAACAGTGGCGGGATGATGCTTTTGATGTC	TRDEEQWRDDAFDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	25	4	0	86.2
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  N  F  R  S  Y  W  M  H  W  V  R  Q  G  P  G  K  G  L  
                    Query_6203   1    GGTCCCTGAGACTCTCCTGTGTCGGTTCTGGATTCAACTTCAGAAGCTACTGGATGCACTGGGTCCGCCAAGGTCCAGGAAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-74*01  47   .....................CA.CC..........C......T............................C......G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  A  R  I  N  R  D  G  I  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6203   91   TGTGGGTCGCACGTATTAATAGAGATGGGATTAGCACGACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.6% (229/250)  IGHV3-74*01  137  ........T.............T.......G......A.G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  K  T  M  Y  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  T  R  D  E  E  Q  W  R  D  
                    Query_6203   181  AGAAGACGATGTATCTACAAATGAACAGTCTGAGAGACGAGGACACGGCTGTTTACTATTGTACAAGAGATGAAGAACAGTGGCGGGATG  270
V  91.6% (229/250)  IGHV3-74*01  227  ....C...C.......G...................C...............G..T..C...G.......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-19*01  9    -----------------------------------------------------------------------------.......------  15
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------------..  2

                                      ------------->                                  
                                      D  A  F  D  V  W  G  Q  G  T  L  V  T  V  S  T  
                    Query_6203   271  ATGCTTTTGATGTCTGGGGCCAAGGGACATTGGTCACCGTCTCTACAG  318
J  96.0% (48/50)    IGHJ3*01     3    .............................A..............T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_224355

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           272     2e-75
IGHD2-15*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGCCCGCTGCCC	GTGGTGGCTG	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGATCAGCCCGCTGCCCGTGGTGGCTGCTTTGACTAC	TRDQPAARGGCFDY	234	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	20	15	15	0	0	100
CDR1-IMGT	21	44	24	20	4	0	83.3
FR2-IMGT	45	95	51	47	4	0	92.2
CDR2-IMGT	96	119	24	17	7	0	70.8
FR3-IMGT	120	233	114	101	13	0	88.6
CDR3-IMGT (germline)	234	241	8	5	3	0	62.5
Total	N/A	N/A	236	205	31	0	86.9


Alignments

                                      <--FR1-IMGT---><-------CDR1-IMGT------><--------------------FR2-IMGT--------------------->
                                       S  C  A  A  S  G  L  T  F  T  N  F  A  M  T  W  V  R  Q  P  P  G  K  G  L  E  W  V  S  S 
                    Query_6204   6    TCCTGTGCAGCCTCTGGATTAACCTTTACCAACTTTGCCATGACCTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGGAGTGGGTCTCCTCT  95
V  86.9% (205/236)  IGHV3-23*01  61   ....................C.......G..G..A........G.............G............................AG..  150
                                       S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A 

                                      <-------CDR2-IMGT------><----------------------------------------------------FR3-IMGT-----
                                       I  S  G  R  D  F  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  S 
                    Query_6204   96   ATTAGTGGCCGTGATTTTACGACATATTACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCAAGAACACCCTATCT  185
V  86.9% (205/236)  IGHV3-23*01  151  ........TA...G.GG..GC.....C...........C.................................T..........G..G.A.  240
                                       I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y 

                                      -----------------------------------------------><----------------CDR3-IMGT--------------->
                                       L  R  M  N  S  L  R  V  G  D  T  A  L  Y  Y  C  T  R  D  Q  P  A  A  R  G  G  C  F  D  Y 
                    Query_6204   186  CTGCGAATGAACAGTCTGAGAGTCGGGGACACGGCTCTTTATTACTGTACAAGAGATCAGCCCGCTGCCCGTGGTGGCTGCTTTGACTAC  275
V  86.9% (205/236)  IGHV3-23*01  241  ....A.........C.......C..A.........CG.A.........G.G.A...----------------------------------  296
                                       L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                     
D  90.0% (9/10)     IGHD2-15*01  15   ----------------------------------------------------------------------.....A....----------  24
J  97.7% (43/44)    IGHJ4*02     5    --------------------------------------------------------------------------------..........  14

                                                                        
                                       W  G  R  G  T  L  V  T  V  S  S  
                    Query_6204   276  TGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.7% (43/44)    IGHJ4*02     15   .......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_224354

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           424     8e-121
IGHD6-19*01                                                                                           21.8    0.045 
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCAGG	GCAGTGGCTGG	CACG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTC	ARVPGQWLARGMDV	281	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	166	21	18	3	0	85.7
FR3-IMGT	167	280	114	112	2	0	98.2
CDR3-IMGT (germline)	281	287	7	7	0	0	100
Total	N/A	N/A	287	279	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S
                    Query_6205   1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAG  90
V  97.2% (279/287)  IGHV3-53*01  6    ..........G..............................................................................A  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  M  Y  S  G  G  T  T  Y  Y  A  E  S
                    Query_6205   91   CTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATGTATAGCGGTGGGACCACATACTACGCAGAGTC  180
V  97.2% (279/287)  IGHV3-53*01  96   ........G................................................T...........T.G...............C..  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V
                    Query_6205   181  CGTGAAGGGCCGATTCACCATCTCAAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGT  270
V  97.2% (279/287)  IGHV3-53*01  186  ........................C.................................................................  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><----------------CDR3-IMGT--------------->                                 
                                        Y  Y  C  A  R  V  P  G  Q  W  L  A  R  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6205   271  GTATTACTGTGCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  355
V  97.2% (279/287)  IGHV3-53*01  276  .................--------------------------------------------------------------------  292
                                        Y  Y  C  A  R                                                                      
D  100.0% (11/11)   IGHD6-19*01  8    ------------------------...........--------------------------------------------------  18
J  100.0% (46/46)   IGHJ6*02     17   ---------------------------------------..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_224352

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           353     9e-100
IGHD1-26*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCG	GGGAGCTAC	GTTCCCGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGGGGAGCTACGTTCCCGCCTACTTTGACTAC	ARDPGSYVPAYFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6206   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGGCTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  95.2% (238/250)  IGHV3-21*01  47   ............................................A......G.................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  G  S  Y  I  F  Y  A  D  S  V  G  G  R  F  T  I  S  R  D  N  A  
                    Query_6206   91   AGTGGGTCTCTTCAATTAGTAGTAGTGGTAGTTACATATTCTACGCAGACTCAGTGGGGGGCCGCTTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-21*01  137  ..........A..C............A............A................AA......A.........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  P  G  S  Y  V  P  
                    Query_6206   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGATCCGGGGAGCTACGTTCCCG  270
V  95.2% (238/250)  IGHV3-21*01  227  ........................................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD1-26*01  9    --------------------------------------------------------------------------.........-------  17

                                      ------------->                                  
                                      A  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_6206   271  CCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  97.9% (46/47)    IGHJ4*02     2    -..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_67779

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           371     6e-105
IGHD6-25*01                                                                                           12.2    31    
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTTGGGCCC	GCGGCT	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTTGGGCCCGCGGCTGGTATGGACGTC	ARDVGPAAGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  M  R  S  G  G  Y  Y  W  S  W  I  R  Q  R  P  G  K  G 
                    Query_6207   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATGAGGAGTGGTGGATACTACTGGAGCTGGATCCGCCAGCGCCCAGGGAAGGGC  90
V  97.2% (244/251)  IGHV4-31*01  49   ...............................G......C..C........T.........................A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  I  D  T  S 
                    Query_6207   91   CTGGAGTGGATTGGGAACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAATAGACACGTCT  180
V  97.2% (244/251)  IGHV4-31*01  139  ...............T..............................................................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  V  G  P  A  A  G 
                    Query_6207   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGTTGGGCCCGCGGCTGGT  270
V  97.2% (244/251)  IGHV4-31*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD6-25*01  11   ---------------------------------------------------------------------------------......---  16
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6207   271  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  312
J  100.0% (45/45)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_67778

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     9e-121
IGHD6-13*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              114     2e-29 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TT	CAGCAGCTGG	CAAACCGGCTAACA	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCAGCAGCTGGCAAACCGGCTAACAATTACTACTACTACTACGGTCTGGACGTC	ARHSAAGKPANNYYYYYGLDV	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	281	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_6208   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGTTA  90
V  96.6% (281/291)  IGHV5-51*01  6    ....................................C..................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  L  P  G  K  G  L  E  W  M  G  F  I  Y  P  G  D  S  H  T  K  Y  S  P
                    Query_6208   91   CTGGATCGGCTGGGTGCGCCAGCTGCCCGGGAAAGGCCTGGAGTGGATGGGATTCATCTATCCTGGTGACTCTCATACCAAATACAGCCC  180
V  96.6% (281/291)  IGHV5-51*01  96   ......................A............................GA....................G......G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  G  P  K  A  S  D  T  A
                    Query_6208   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCGGCCCGAAGGCCTCGGACACCGC  270
V  96.6% (281/291)  IGHV5-51*01  186  .......C...........................................................A...T..................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        M  Y  Y  C  A  R  H  S  A  A  G  K  P  A  N  N  Y  Y  Y  Y  Y  G  L  D  V  W  G  Q  G  T
                    Query_6208   271  CATGTATTACTGTGCGAGACATTCAGCAGCTGGCAAACCGGCTAACAATTACTACTACTACTACGGTCTGGACGTCTGGGGCCAAGGGAC  360
V  96.6% (281/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------..........---------------------------------------------------------  18
J  98.4% (61/62)    IGHJ6*02     1    -----------------------------------------------....................A......................  43

                                                         
                                        T  V  T  V  S  S 
                    Query_6208   361  CACGGTCACCGTCTCCTCA  379
J  98.4% (61/62)    IGHJ6*02     44   ...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_321432

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-3*01                                                                                            10.3    119  
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GCTTG	ACGAT	CGCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGCTTGACGATCGCATACTACTTTGACTAC	ATGLTIAYYFDY	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_6209   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  94.8% (236/249)  IGHV4-31*03  50   .....TCC...A..................G...........................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  D  T  S  
                    Query_6209   94   TAGAGTGGATTGGGTACATCTATTACAGTGGGAGCACTTACTACAACCCGTCCCTCAGGAGTCGAGTTACCATATCACTAGACACGTCTA  183
V  94.8% (236/249)  IGHV4-31*03  140  .G...................................C...................A...................G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  D  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  L  T  I  A  Y  Y  
                    Query_6209   184  AGGACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGCTTGACGATCGCATACTACT  273
V  94.8% (236/249)  IGHV4-31*03  230  ..A...............A.................................G.............G..---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-3*01   6    --------------------------------------------------------------------------.....-----------  10
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6209   274  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_321433

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           18.0    0.59 
IGHJ6*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TCATTGGG	TGGTTCGGG	CCCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATCATTGGGTGGTTCGGGCCCTTACTACTACTACGGTATGGACGTC	AKSLGGSGPYYYYGMDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	23	1	0	95.8
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	123	24	23	1	0	95.8
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	230	225	5	0	97.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  N  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  
                    Query_6210   14   GTGCAGCCTCTGGATTCACCTTTAGCAACTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTA  103
V  97.8% (225/230)  IGHV3-23*01  65   ...........................G...........G..................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  G  S  T  D  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_6210   104  GTGGTAGTGGTGGCAGCACAGACCACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGC  193
V  97.8% (225/230)  IGHV3-23*01  155  .............T......T..T..................................................................  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------------CDR3-IMGT----------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  S  L  G  G  S  G  P  Y  Y  Y  Y  G  M  
                    Query_6210   194  AAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAATCATTGGGTGGTTCGGGCCCTTACTACTACTACGGTATGG  283
V  97.8% (225/230)  IGHV3-23*01  245  ..................................................----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (9/9)     IGHD3-10*01  10   ----------------------------------------------------------.........-----------------------  18
J  96.5% (55/57)    IGHJ6*02     6    -----------------------------------------------------------------------...................  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_6210   284  ACGTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  321
J  96.5% (55/57)    IGHJ6*02     25   .............A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_321430

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           307     1e-85
IGHD1-26*01                                                                                           12.2    31   
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARAKGIAVIVDAFDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	97	17	0	85.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	220	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_6211   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAG  90
V  90.2% (220/244)  IGHV4-59*01  49   ..................A.....................G............................C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  V  S  V  D  I  S  N  N 
                    Query_6211   91   TGGATTGGATATATCTATTACAGAGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAGACATTTCCAACAAC  180
V  90.2% (220/244)  IGHV4-59*01  139  ........G..............T....G.....A......C.....CC................CA.A..........CG.....G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  K  G  I  A  V  I  V  D 
                    Query_6211   181  CGGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGTGCGAGAGCTAAGGGTATCGCTGTTATAGTAGAT  270
V  90.2% (220/244)  IGHV4-59*01  229  .A...........AG.................T.......CG.....G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------------......----  8
J  91.8% (45/49)    IGHJ3*01     2    ---------------------------------------------------------------------------------------...  4

                                      ----------->                                  
                                       A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_6211   271  GCTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  316
J  91.8% (45/49)    IGHJ3*01     5    .........G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_321431

Length=302
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            184     1e-48
IGHD2-2*01                                                                                            12.2    28   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	204	245	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR2-IMGT	51	68	18	17	1	0	94.4
CDR2-IMGT	69	89	21	15	6	0	71.4
FR3-IMGT	90	203	114	101	13	0	88.6
CDR3-IMGT (germline)	204	209	6	5	1	0	83.3
Total	N/A	N/A	159	138	21	0	86.8


Alignments

                                     <----FR2-IMGT----><-----CDR2-IMGT-----><--------------------------------------------------
                                      L  E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P 
                    Query_6212  51   CTGGAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCC  140
V  86.8% (138/159)  IGHV4-4*01  136  .................A...T.....A.T..GAG............C.........A.............................T..  225
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 

                                     --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                      R  N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T 
                    Query_6212  141  AGAAATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACT  230
V  86.8% (138/159)  IGHV4-4*01  226  .AG..C.............AG...A.C...G.....G.....................G.......A..---------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                      
D  83.3% (10/12)    IGHD2-2*01  13   -------------------------------------------------------------------------.....C..G...-----  24

                                     -------------->                                  
                                      R  G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_6212  231  CGGGGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  279
J  93.0% (40/43)    IGHJ4*02    6    ------.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 29037525


Query= Query_23742

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD2-8*02                                                                                            14.1    9.4   
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGT	TACTGGT	ACCAACGCCAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTC	ARLVTGTNATYGLDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_6213   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAGCTA  90
V  98.3% (284/289)  IGHV5-51*03  6    .................................................................G........................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  R  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_6213   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGAGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ........G..................................T..............................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6213   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ...................................A.........C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  L  V  T  G  T  N  A  T  Y  G  L  D  V  W  G  Q  G  S  K  V  T  V  S  S
                    Query_6213   271  CATGTATTACTGTGCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTCTGGGGCCAAGGGAGCAAGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-8*02   10   ------------------------.......-----------------------------------------------------------  16
J  93.9% (46/49)    IGHJ6*02     14   ------------------------------------------.......A.....................C..C...............  61

                                       
                                       
                    Query_6213   361  A  361
J  93.9% (46/49)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_321437

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6214   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_6214   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_6214   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6214   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_321434

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           358     4e-101
IGHD3-16*01                                                                                           12.2    35    
IGHJ6*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCC	TTGGGG	CGGC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCTTGGGGCGGCCTACGGTTTGGACGTC	ARPLGAAYGLDV	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	259	30	0	89.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  D  S  L  T  I  S  C  Q  V  S  G  Y  I  F  T  H  Y
                    Query_6215   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCGGGGGACTCTCTGACGATCTCCTGTCAGGTTTCTGGATACATCTTCACCCACTA  90
V  89.6% (259/289)  IGHV5-51*03  6    ...............................A..........G.......A..........A...G...........G...T...AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  C  Q  V  A  G  K  G  L  E  W  M  G  V  I  Y  P  D  D  S  D  A  R  Y  S  P
                    Query_6215   91   TTGGATCGCCTGGGTGTGCCAGGTGGCCGGCAAAGGCCTAGAGTGGATGGGGGTCATCTATCCTGACGACTCTGATGCTAGATACAGCCC  180
V  89.6% (259/289)  IGHV5-51*03  96   C.......G.......C.....A..C....G........G............A............GT.........A.C...........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  L  V  T  I  S  V  D  K  S  L  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6215   181  GTCCTTTCAAGGCCTGGTCACCATCTCAGTCGACAAGTCCCTCAGTACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  89.6% (259/289)  IGHV5-51*03  186  ......C.......A..............C..........A....C....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  F  C  A  R  P  L  G  A  A  Y  G  L  D  V  W  G  Q  G  T  A  V  V  V  S  S 
                    Query_6215   271  CATTTACTTCTGTGCGAGACCCCTTGGGGCGGCCTACGGTTTGGACGTCTGGGGCCAAGGGACCGCGGTCGTCGTCTCGTCA  352
V  89.6% (259/289)  IGHV5-51*03  276  ...G..T.A..........---------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                
D  100.0% (6/6)     IGHD3-16*01  16   -----------------------......-----------------------------------------------------  21
J  89.8% (44/49)    IGHJ6*02     14   ---------------------------------.......A.......................A.....AC......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_23741

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD2-2*02                                                                                            12.2    32    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCA	CTGGTATAC	TTACGTCAGCGGGGGATATG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTGGTATACTTACGTCAGCGGGGGATATGTTGACTAC	ARGHWYTYVSGGYVDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6216   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S 
                    Query_6216   91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGCTACCATATCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ................A.................G................................T......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  W  Y  T  Y  V 
                    Query_6216   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCACTGGTATACTTACGTC  270
V  97.6% (244/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (8/9)      IGHD2-2*02   22   --------------------------------------------------------------------------...C.....-------  30

                                      GT------------------>                                  
                                       S  G  G  Y  V  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_6216   271  AGCGGGGGATATGTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  325
J  97.6% (41/42)    IGHJ4*02     7    -------------.............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_73747

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            392     2e-111
IGHD7-27*01                                                                                           10.3    124   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	AGAGGGC	CTGGG	TTGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGAAGAGGGCCTGGGTTGGTTGACTAC	AHRRGPGLVDY	263	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	49	2	0	96.1
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	112	2	0	98.2
CDR3-IMGT (germline)	263	271	9	9	0	0	100
Total	N/A	N/A	271	261	10	0	96.3


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  L  S  L  T  T  G  G  V  A  V  A  W  I  R
                    Query_6217   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGCTCTCACTCACCACTGGTGGAGTGGCTGTGGCCTGGATCCG  90
V  96.3% (261/271)  IGHV2-5*01   30   .................................................T.........G....A.........G.....G.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  D  W  L  A  L  I  D  G  N  D  D  K  R  F  S  P  S  L  K  S  R  L  T
                    Query_6217   91   TCAGCCCCCAGGAAAGGCCCTGGACTGGCTTGCACTCATTGATGGGAATGATGATAAGCGCTTCAGCCCATCTCTGAAGAGCAGGCTCAC  180
V  96.3% (261/271)  IGHV2-5*01   120  ........................G...............T..T..................A...........................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  H  C  A  H  R
                    Query_6217   181  CATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATCACTGTGCACACAG  270
V  96.3% (261/271)  IGHV2-5*01   210  ............................................................................T.............  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  R

                                      ----CDR3-IMGT----------->                                  
                                        R  G  P  G  L  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6217   271  AAGAGGGCCTGGGTTGGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  329
V  96.3% (261/271)  IGHV2-5*01   300  .----------------------------------------------------------  300
                                                                                                 
D  100.0% (5/5)     IGHD7-27*01  5    --------.....----------------------------------------------  9
J  100.0% (42/42)   IGHJ4*02     7    -----------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_321438

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           439     2e-125
IGHD2-2*01                                                                                            14.1    9.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTCAATTTGGTTCCGCAAATGG	GTACCAG	N/A	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTCAATTTGGTTCCGCAAATGGGTACCAGTACGGCATGGACGTC	ARFQFGSANGYQYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	285	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_6218   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  98.6% (285/289)  IGHV5-51*03  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_6218   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATTGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.6% (285/289)  IGHV5-51*03  96   ................................................G.........................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  R  A  S  D  S  A
                    Query_6218   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACAGCGC  270
V  98.6% (285/289)  IGHV5-51*03  186  ............................................G.............................A...........C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  F  Q  F  G  S  A  N  G  Y  Q  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_6218   271  CATGTATTACTGTGCGAGATTTCAATTTGGTTCCGCAAATGGGTACCAGTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  98.6% (285/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-2*01   15   ------------------------------------------.......-----------------------------------------  21
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------------.....T...................................  55

                                             
                                        S  S 
                    Query_6218   361  CTCCTCA  367
J  97.9% (47/48)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_321439

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_6219   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_6219   91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y 
                    Query_6219   181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTAC  270
V  91.4% (223/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD2-2*01   8    ---------------------------------------------------------------------........T........----  24
J  88.5% (46/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_6219   271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  318
J  88.5% (46/52)    IGHJ6*02     15   ...GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_95369

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           349     2e-98
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	CGCA	GATAGGAGTGGTTATTACT	TAGAATTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGCGCAGATAGGAGTGGTTATTACTTAGAATTT	SSADRSGYYLEF	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  F  G  M  H  W  V  R  L  A  P  G  K  G  L  
                    Query_6220   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTAGCTTTGGCATGCACTGGGTCCGCCTGGCTCCAGGCAAGGGGCTGG  90
V  95.1% (235/247)  IGHV3-30*03  47   ....................................C...........A....................A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  N  N  E  Y  Y  A  D  A  V  K  G  R  F  T  I  F  R  D  N  S  
                    Query_6220   91   AGTGGGTGGCAGTTATATCATATGATGGAAATAATGAATATTATGCAGACGCCGTGAAGGGCCGATTCACCATCTTCAGAGACAATTCCA  180
V  95.1% (235/247)  IGHV3-30*03  137  ..............................G....A....C.........T........................C..............  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  S  S  A  D  R  S  G  Y  Y  
                    Query_6220   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTGTGTATTACTGTTCGAGCGCAGATAGGAGTGGTTATTACT  270
V  95.1% (235/247)  IGHV3-30*03  227  ....................................CT..G.....................G....-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.7% (18/19)    IGHD3-22*01  11   -----------------------------------------------------------------------.....T.............  29

                                      ------->                               
                                      L  E  F  W  G  Q  G  T  L  V  T  V  S  
                    Query_6220   271  TAGAATTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  309
J  100.0% (31/31)   IGHJ4*02     15   --------...............................  45


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_95368

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD1-1*01                                                                                            14.1    9.2   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAGGGGG	CAACTGG	GACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTAC	ARGGGNWDPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	269	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  Y
                    Query_6221   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCTA  90
V  93.4% (269/288)  IGHV5-51*01  6    .................................................................G............C......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  H  M  P  G  E  G  L  E  W  T  G  V  V  Y  P  D  D  S  D  A  R  Y  S  P
                    Query_6221   91   CTGGATCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGACGGGGGTCGTCTATCCTGATGACTCTGATGCCAGATACAGCCC  180
V  93.4% (269/288)  IGHV5-51*01  96   ..................C..G.........A..........G....T....A..A.........G..........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  I  T  I  S  A  D  K  S  I  S  T  A  F  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_6221   181  GTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (269/288)  IGHV5-51*01  186  .......C.......GG....................................A...........G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  G  N  W  D  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6221   271  CATCTATTACTGTGCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.4% (269/288)  IGHV5-51*01  276  ...G..............-----------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------.......-------------------------------------------------  11
J  100.0% (44/44)   IGHJ4*02     5    ---------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_23749

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           333     1e-93
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACAAGGGGATAA	CTATAGTTAC	GAATCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACAAGGGGATAACTATAGTTACGAATCT	AQGDNYSYES	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	241	2	2	0	0	100
Total	N/A	N/A	241	227	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  W  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6222   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTTGGAACTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.2% (227/241)  IGHV3-53*01  47   ............................................A.C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  A  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  K  
                    Query_6222   91   AGTGGGTCTCAGTCATTTATGCCGGTGGTAGCACATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  94.2% (227/241)  IGHV3-53*01  137  .............T......AG...............C..C........................................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------CDR3-IMGT---------> 
                                      K  V  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  Q  G  D  N  Y  S  Y  E  S  
                    Query_6222   181  AAGTGTTGTATCTTCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCACAAGGGGATAACTATAGTTACGAATCTT  270
V  94.2% (227/241)  IGHV3-53*01  227  .CAC.C.............G.........................................-----------------------------  287
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  90.0% (9/10)     IGHD5-18*01  11   -------------------------------------------------------------------------....G.....-------  20
J  97.1% (33/34)    IGHJ4*02     15   -----------------------------------------------------------------------------------------.  15

                                                                       
                                      W  G  R  G  T  L  V  T  V  S  S  
                    Query_6222   271  GGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  303
J  97.1% (33/34)    IGHJ4*02     16   ......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_20215

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           371     7e-105
IGHD2-2*01                                                                                            18.0    0.61  
IGHJ6*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCTAG	CCTCACGATTGGAA	TACCAGGTGCTA	AGGGGGACGGCG	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGCCTCACGATTGGAATACCAGGTGCTAAGGGGGACGGCGTGGACGTC	ASLTIGIPGAKGDGVDV	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	110	4	0	96.5
CDR3-IMGT (germline)	249	253	5	4	1	0	80
Total	N/A	N/A	253	245	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_6223   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  96.8% (245/253)  IGHV3-73*01  47   .........A................................................................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  S  K  T  N  N  Y  A  T  A  Y  A  A  S  V  R  G  R  F  T  I  S  R  D  
                    Query_6223   91   AGTGGGTTGGCCGTATTAGAAGCAAAACTAACAATTACGCGACAGCATATGCTGCGTCGGTGAGAGGCAGGTTCACCATCTCCAGAGATG  180
V  96.8% (245/253)  IGHV3-73*01  137  ..........................G......G.............................A..........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  K  N  T  A  F  L  Q  M  N  S  L  I  T  E  G  T  A  V  Y  Y  C  A  S  L  T  I  G  I  
                    Query_6223   181  ATTCAAAGAACACGGCGTTTCTGCAAATGAACAGCCTGATAACCGAGGGCACGGCCGTGTATTACTGTGCTAGCCTCACGATTGGAATAC  270
V  96.8% (245/253)  IGHV3-73*01  227  ..................A....................A........A...................A....-----------------  299
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  91.7% (11/12)    IGHD2-2*01   16   ---------------------------------------------------------------------------------------...  18

                                      DR3-IMGT-------------------->                                 
                                      P  G  A  K  G  D  G  V  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_6223   271  CAGGTGCTAAGGGGGACGGCGTGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  332
D  91.7% (11/12)    IGHD2-2*01   19   ...C.....-----------------------------------------------------  27
J  97.6% (40/41)    IGHJ6*02     22   ---------------------..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_20214

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ2*01                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	TACTATAATCCTAGTGGTTATTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACTATAATCCTAGTGGTTATTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGYYGYWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	239	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_6224   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.6% (239/245)  IGHV4-59*01  49   ............................................................A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  I  S  K  N 
                    Query_6224   91   TGGATTGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGATATCTCCAAGAAC  180
V  97.6% (239/245)  IGHV4-59*01  139  ........G....................................................................C.CG.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  Y  Y 
                    Query_6224   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACTACTATAATCCTAGTGGTTATTAC  270
V  97.6% (239/245)  IGHV4-59*01  229  ...................G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (21/24)    IGHD3-22*01  5    ------------------------------------------------------------------......G..AG.............  28

                                      -------------------->                                  
                                       G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6224   271  GGGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  325
J  100.0% (52/52)   IGHJ2*01     2    ---....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_94096

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-10*01                                                                                           37.2    9e-07 
IGHJ3*02                                                                                              62.2    6e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCATCG	CTATGGTTCGGGGAGTTAT	GC	TGATA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCATCGCTATGGTTCGGGGAGTTATGCTGATATG	ARGHRYGSGSYADM	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  I  V  S  G  V  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6225   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (242/250)  IGHV4-31*03  49   ...................C...........G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_6225   91   CTGGAGTGGATTGGGTACATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTTCCATATCTGTAGACACGTCT  180
V  96.8% (242/250)  IGHV4-31*03  139  ..........................C..........................................A.......A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  R  Y  G  S  G 
                    Query_6225   181  AAGAATCAGTTCTCCCTGAAGCTGAGTTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCATCGCTATGGTTCGGGG  270
V  96.8% (242/250)  IGHV4-31*03  229  .....C....................C...............................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (19/19)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      -------------->                                  
                                       S  Y  A  D  M  W  G  R  G  T  M  V  T  V  S  S  
                    Query_6225   271  AGTTATGCTGATATGTGGGGCCGCGGGACAATGGTCACCGTCTCTTCAG  319
D  100.0% (19/19)   IGHD3-10*01  20   ......-------------------------------------------  25
J  92.7% (38/41)    IGHJ3*02     10   --------......C.......AA.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_94090

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           297     7e-83
IGHD2-8*01                                                                                            10.3    120  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACGGGTCAGCAATTGGCAC	CTAAT	CTTGAGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATACGGGTCAGCAATTGGCACCTAATCTTGAGTCA	VRDTGQQLAPNLES	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  D  T  F  S  I  F  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6226   1    GGTCCCTGAGACTCTCCTGTGAAGGATCTGGAGACACTTTTAGCATTTTCTGGATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  88.0% (220/250)  IGHV3-74*01  47   .....................C..CC......TT...C..C..T.GC.A.....................A...................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  H  V  G  T  I  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6226   91   TTTGGGTCTCACGCATTAATCATGTTGGGACAATCACAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  88.0% (220/250)  IGHV3-74*01  137  .G...........T......AG..A.....GT.G.....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  F  C  V  R  D  T  G  Q  Q  L  A  
                    Query_6226   181  AGAACACCCTCTATCTGCAAATGAACAGTCTGAGAGCCGACGACACGGCAGTATATTTTTGTGTCAGAGATACGGGTCAGCAATTGGCAC  270
V  88.0% (220/250)  IGHV3-74*01  227  .......G..G.............................G........T..G....AC....CA.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ------------->                                  
                                      P  N  L  E  S  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6226   271  CTAATCTTGAGTCATGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (5/5)     IGHD2-8*01   12   .....-------------------------------------------  16
J  97.1% (33/34)    IGHJ4*02     15   --------------.......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_20210

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     6e-118
IGHD2-2*02                                                                                            10.3    140   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCTAAAACAGGCCCAGAA	ATACC	CGACCCCCG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCTAAAACAGGCCCAGAAATACCCGACCCCCGACTTCGGTATGGACGTC	ARPLKQAQKYPTPDFGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_6227   1    GCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAATTA  90
V  95.8% (277/289)  IGHV5-51*03  6    ........................G.............................................................GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  R  L  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  H  S  D  T  R  Y  S  P
                    Query_6227   91   CTGGATCGCCTGGGTGCGCCGGCTGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTCACTCTGATACCAGATACAGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   ........G...........A.A............................................G......................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  A  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  H  W  S  S  L  E  A  S  D  T  A
                    Query_6227   181  GTCCTTCCAAGCCCAGGTCACCATCTCAGCCGACAGGTCCATCAGCACCGCCTACCTGCACTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  ...........G.......................A........................G............A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  S  C  A  R  P  L  K  Q  A  Q  K  Y  P  T  P  D  F  G  M  D  V  W  G  Q  G  T  A  V
                    Query_6227   271  CATGTATTCCTGTGCGAGACCTCTAAAACAGGCCCAGAAATACCCGACCCCCGACTTCGGTATGGACGTCTGGGGCCAAGGGACCGCGGT  360
V  95.8% (277/289)  IGHV5-51*03  276  ........A..........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD2-2*02   27   ---------------------------------------.....----------------------------------------------  31
J  96.0% (48/50)    IGHJ6*02     13   -----------------------------------------------------...A............................A....  49

                                                   
                                        T  V  S  S 
                    Query_6227   361  CACCGTCTCCTCA  373
J  96.0% (48/50)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_94092

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         349     2e-98
IGHD5-12*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGAGGAT	TGGCTACGA	GACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGACCCCCTTTGACCTC	ARAGRIGYETPFDL	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_6228     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTACTCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  95.1% (235/247)  IGHV4-38-2*02  49   ................................................T.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K 
                    Query_6228     91   GAGTGGATTGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAG  180
V  95.1% (235/247)  IGHV4-38-2*02  139  ......................A.........C.........A..............A........................C.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  Q  F  S  L  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  T 
                    Query_6228     181  AACCAGTTCTCGTTGAATCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGAGCGGGGAGGATTGGCTACGAGACC  270
V  95.1% (235/247)  IGHV4-38-2*02  229  ...........CC....G....G...........C...............G................-----------------------  295
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD5-12*01    11   -----------------------------------------------------------------------------.........----  19

                                        ----------->                                  
                                         P  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6228     271  CCCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.5% (42/44)    IGHJ4*02       5    --.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_20212

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATTTGCTGA	TTCGGGGA	TTGAAAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGTC	AKFADSGIETYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	276	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  S  F
                    Query_6229   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTATCAGCTT  90
V  96.2% (276/287)  IGHV5-51*01  6    ...................................................................................C.....A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  C  L  G  I  I  D  P  R  D  S  D  T  T  Y  S  P
                    Query_6229   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGCTTGGGGATCATCGATCCTCGTGACTCTGATACCACATACAGCCC  180
V  96.2% (276/287)  IGHV5-51*01  96   ........G....................................GA...........T.....G...............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  T  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6229   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (276/287)  IGHV5-51*01  186  .............................C...........T................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  K  F  A  D  S  G  I  E  T  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_6229   271  CATGTATTATTGTGCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTC  360
V  96.2% (276/287)  IGHV5-51*01  276  .........C.......-------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                           
D  100.0% (8/8)     IGHD3-10*01  13   ---------------------------........-------------------------------------------------------  20
J  98.0% (48/49)    IGHJ6*02     14   ------------------------------------------.............................................C..  61

                                       
                                       
                    Query_6229   361  A  361
J  98.0% (48/49)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_165027

Length=431
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     5e-116
IGHD3-9*01                                                                                            12.2    40    
IGHJ6*02                                                                                              108     1e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-9*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	ACGGGCCCCA	ATTTCGATA	GCACTTCGGAACGCTGGGGCCGACGAAAGAAAATATC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAACGGGCCCCAATTTCGATAGCACTTCGGAACGCTGGGGCCGACGAAAGAAAATATCACTACTACTACAACGGTATGGACGTC	RDNGPQFR*HFGTLGPTKENITTTTTVWTS	283	372	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	69	70	68	1	1	97.1
CDR1-IMGT	70	93	24	19	5	0	79.2
FR2-IMGT	94	144	51	49	2	0	96.1
CDR2-IMGT	145	168	24	21	3	0	87.5
FR3-IMGT	169	282	114	113	1	0	99.1
CDR3-IMGT (germline)	283	290	8	8	0	0	100
Total	N/A	N/A	291	278	12	1	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L   C  S  L  E  Q  R  *  K  S  P  G  S  L  *  R  S  P  V  R  V  L  D  P  A  L  T  R  
                    Query_6230   1    GCAGCTG-TGCAGTCTGGAGCAGAGGTGAAAGAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATCCGGCTTTAACACGTA  89
V  95.5% (278/291)  IGHV5-51*01  6    .......G.......................A..........................................A.A......C..GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                      T  G  S  P  G  C  A  R  C  P  G  K  A  W  T  G  W  G  S  S  M  L  M  T  L  I  P  H  T  A  
                    Query_6230   90   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGACTGGATGGGGATCATCTATGTTGATGACTCTGATACCACATACAGCCC  179
V  95.5% (278/291)  IGHV5-51*01  96   ........G.................................G..................CC..G..............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                      R  P  S  K  A  R  S  P  S  Q  P  T  S  P  S  A  P  P  T  C  S  G  A  A  *  R  P  R  T  P  
                    Query_6230   180  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  269
V  95.5% (278/291)  IGHV5-51*01  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------------------------CDR3-IMGT---------------------------
                                      P  C  I  T  V  R  D  N  G  P  Q  F  R  *  H  F  G  T  L  G  P  T  K  E  N  I  T  T  T  T  
                    Query_6230   270  CATGTATTACTGTGCGAGACAACGGGCCCCAATTTCGATAGCACTTCGGAACGCTGGGGCCGACGAAAGAAAATATCACTACTACTACAA  359
V  95.5% (278/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  88.9% (8/9)      IGHD3-9*01   3    -------------------------------...A.....--------------------------------------------------  11
J  98.3% (58/59)    IGHJ6*02     4    -----------------------------------------------------------------------------...........T.  16

                                      ------------>                                 
                                      T  V  W  T  S  G  A  K  G  P  R  S  P  S  P   
                    Query_6230   360  CGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  405
J  98.3% (58/59)    IGHJ6*02     17   ..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 42392376


Query= Query_94098

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           279     3e-77
IGHD5-12*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAAAA	CGGGCA	GGATATAGTGACTAC	AACGCGCAAAAT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAAACGGGCAGGATATAGTGACTACAACGCGCAAAATTAC	VKRAGYSDYNAQNY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	10	1	0	90.9
CDR1-IMGT	27	50	24	19	5	0	79.2
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	125	24	18	6	0	75
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	245	6	4	2	0	66.7
Total	N/A	N/A	230	204	26	0	88.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  R  S  Y  A  L  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_6231   16   GTACAGCCTCTGGATTCACCTTTAGAAGTTATGCATTACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATTT  105
V  88.7% (204/230)  IGHV3-30*18  65   ..G...................C..T..C....GCA.G..................................................A.  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  Y  D  G  T  T  R  H  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  S  E  N  M  L  F  L  
                    Query_6231   106  CGTATGATGGAACTACTAGGCACTATGCAGACTCCGTGACGGGCCGATTCACCATCTCCAGAGACAATTCCGAGAACATGCTGTTTCTGG  195
V  88.7% (204/230)  IGHV3-30*18  155  .A..........G..A..AAT..................A...............................A......C.....A....C  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      E  M  N  S  L  R  T  E  D  T  A  V  Y  Y  C  V  K  R  A  G  Y  S  D  Y  N  A  Q  N  Y  W  
                    Query_6231   196  AAATGAACAGCCTCAGAACTGAGGACACGGCTGTCTATTATTGTGTAAAACGGGCAGGATATAGTGACTACAACGCGCAAAATTACTGGG  285
V  88.7% (204/230)  IGHV3-30*18  245  .............G...G................G.....C....CG...----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  93.3% (14/15)    IGHD5-12*01  3    --------------------------------------------------------..........G....-------------------  17
J  97.0% (32/33)    IGHJ4*02     12   -----------------------------------------------------------------------------------.......  18

                                                                
                                      G  Q  G  T  L  V  T  V  S 
                    Query_6231   286  GCCAGGGAACTCTGGTCACCGTCTCC  311
J  97.0% (32/33)    IGHJ4*02     19   ..........C...............  44


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_165026

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           360     1e-101
IGHD2-2*01                                                                                            10.3    127   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGGA	N/A	CCAGC	GCTGGCGACAATC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGACCAGCGCTGGCGACAATCACTACTTTGACTCC	ARTSAGDNHYFDS	267	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	50	45	43	2	0	95.6
CDR1-IMGT	51	80	30	29	1	0	96.7
FR2-IMGT	81	131	51	49	2	0	96.1
CDR2-IMGT	132	152	21	17	4	0	81
FR3-IMGT	153	266	114	104	10	0	91.2
CDR3-IMGT (germline)	267	273	7	7	0	0	100
Total	N/A	N/A	268	249	19	0	92.9


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  S  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  T  T  S  G  M  C  V  T  W  I  R 
                    Query_6232   6    CTGGTGAAGCCCTCACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCACCACTAGTGGAATGTGTGTGACCTGGATCCGT  95
V  92.9% (249/268)  IGHV2-70*01  31   ........A...A.............................................G....................G..........  120
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R 

                                      ------FR2-IMGT---------------------><-----CDR2-IMGT-----><--------------------------------
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  T  W  D  D  E  R  T  Y  N  T  S  L  Q  T  R  L  T 
                    Query_6232   96   CAACCCCCAGGGAAGGCCCTGGAGTGGCTTGCACTCATTACTTGGGATGATGAGAGAACGTACAACACATCTCTGCAGACCAGGCTCACC  185
V  92.9% (249/268)  IGHV2-70*01  121  ..G....................................GA............T.A.TAC....G..........A..............  210
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T 

                                      --------------------FR3-IMGT----------------------------------------------------><--------
                                       V  S  K  D  S  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  T 
                    Query_6232   186  GTCTCTAAGGACAGCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACCTACTACTGTGCACGGACC  275
V  92.9% (249/268)  IGHV2-70*01  211  A....C.......C.........................................................G..T.............--  298
                                       I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R    
D  100.0% (5/5)     IGHD2-2*01   18   ----------------------------------------------------------------------------------------..  19

                                      ------CDR3-IMGT-------------->                                  
                                       S  A  G  D  N  H  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6232   276  AGCGCTGGCGACAATCACTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  100.0% (5/5)     IGHD2-2*01   20   ...-------------------------------------------------------------  22
J  97.9% (47/48)    IGHJ4*02     1    ----------------............A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_165024

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           378     3e-107
IGHD6-25*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTC	GGGTTTACCAGCGGCT	TGGACGGCTTTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTCGGGTTTACCAGCGGCTTGGACGGCTTTGACTACTTCTACGCTATGGACGTC	ARDVGFTSGLDGFDYFYAMDV	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  D  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  N  S 
                    Query_6233   2    CAGCTGGTGCAGTCTGGAGGTGACGTGAAGAAGCCGGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTTAGCAACTCT  91
V  91.7% (266/290)  IGHV1-18*01  7    ...................C...G...........T.............................T................C..G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  V  P  G  Q  G  L  E  W  M  G  W  I  S  T  Y  N  G  N  T  N  Y  A  Q 
                    Query_6233   92   GGCATCAACTGGGTGCGACAGGTCCCTGGACAAGGGCTAGAGTGGATGGGCTGGATCAGCACTTACAATGGAAACACAAATTATGCACAG  181
V  91.7% (266/290)  IGHV1-18*01  97   ..T....G..............C...............T...........A.........G..........T........C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  L  T  M  A  M  D  T  S  T  S  T  V  Y  M  E  L  T  S  L  R  S  D  D  S  A 
                    Query_6233   182  AACCTCCAGGGCAGACTCACCATGGCCATGGACACATCCACGAGCACAGTCTACATGGAGCTGACGAGCCTGAGGTCTGACGACTCGGCC  271
V  91.7% (266/290)  IGHV1-18*01  187  ..G............G........A...CA...................C..............G.........A.........A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------------CDR3-IMGT-------------------------->               
                                       V  Y  Y  C  A  R  D  V  G  F  T  S  G  L  D  G  F  D  Y  F  Y  A  M  D  V  W  G  Q  G  T 
                    Query_6233   272  GTGTATTACTGTGCGAGAGATGTCGGGTTTACCAGCGGCTTGGACGGCTTTGACTACTTCTACGCTATGGACGTCTGGGGCCAAGGGACC  361
V  91.7% (266/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  87.5% (14/16)    IGHD6-25*01  1    ------------------------....A..G........--------------------------------------------------  16
J  94.6% (53/56)    IGHJ6*02     7    ----------------------------------------------------......A.....G.........................  44

                                                        
                                       P  V  T  V  S  S 
                    Query_6233   362  CCGGTCACCGTCTCCTCA  379
J  94.6% (53/56)    IGHJ6*02     45   A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_324405

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            18.0    0.59 
IGHJ6*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCTTCCCC	GGAATGGTTATT	GTTCG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTTCCCCGGAATGGTTATTGTTCGCTACGCAATTGACGGC	ARGLFPGMVIVRYAIDG	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  Y  Y  M  A  W  I  R  Q  A  P  G  K  G  L  
                    Query_6234   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTGACTACTACATGGCCTGGATCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-11*01  47   ....................................C...................AG.........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  V  S  S  T  V  Y  H  A  E  S  V  K  D  R  F  T  I  S  R  D  N  A  
                    Query_6234   91   AGTGGGTTTCATATATTAGTAGTGTCAGTAGTACCGTATATCACGCAGAGTCTGTGAAGGACCGATTCACCATCTCCAGGGACAACGCCA  180
V  92.4% (230/249)  IGHV3-11*01  137  .............C.........AGTG........A....CT.......C..........G.............................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  F  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  L  F  P  G  M  V  
                    Query_6234   181  AAAACTCACTGTTTCTTCAAATGAACAACCTGAGAGCCGAAGACACGGCCGTGTATTACTGTGCGAGAGGCCTCTTCCCCGGAATGGTTA  270
V  92.4% (230/249)  IGHV3-11*01  227  .G..........A...G..........G............G............................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD3-3*01   15   --------------------------------------------------------------------------------...G......  24

                                      GT-------------------->                                 
                                      I  V  R  Y  A  I  D  G  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6234   271  TTGTTCGCTACGCAATTGACGGCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
D  91.7% (11/12)    IGHD3-3*01   25   ..------------------------------------------------------  26
J  91.8% (45/49)    IGHJ6*02     14   -------.....GT..G....T..................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_192580

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHD3-9*01                                                                                            12.2    31    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGA	ATATTT	CCCACGAGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGACGAATATTTCCCACGAGGCTTTCAGTAC	VRDEYFPRGFQY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6235   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGGCTACTGGATGCACTGGGTCCGCCAAGCACCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-74*01  47   ............................................A............................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  I  I  D  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6235   91   TGTGGGTCTCACGTATTAATAGTGATGGGAGTATCATAGACTCCGCGGATTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-74*01  137  .................................G..C.AG..A......C........................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  E  Y  F  P  R  G  
                    Query_6235   181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGTAAGAGACGAATATTTCCCACGAGGCT  270
V  96.0% (240/250)  IGHV3-74*01  227  .......G.......................................................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-9*01   9    -------------------------------------------------------------------------......-----------  14
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  Q  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6235   271  TTCAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  95.5% (42/44)    IGHJ4*02     7    ..G.C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_92370

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         325     3e-91
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	N/A	N/A	TCACCTGCCAACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGATCACCTGCCAACCCCTACTACCACGCTCTGGACGTC	ARSPANPYYHALDV	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  T  V  S  G  V  Y  I  S  N  G  G  Y  S  W  T  W  I  R  Q  P  P  G  R  G  
                    Query_6236     4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGTCTACATCAGCAATGGTGGTTACTCCTGGACCTGGATCCGGCAGCCACCAGGGAGGGGCC  93
V  91.9% (228/248)  IGHV4-30-2*01  50   .....TCC...A.....G............G..C........G.................G.......................A.....  139
                                           L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  Q  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  R  S  
                    Query_6236     94   TGGAGTGGATTGGGTACATCTATCAAAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGCGTCACCATATCGGTAGACAGGTCCA  183
V  91.9% (228/248)  IGHV4-30-2*01  140  .........................T...............................A......A...........A.............  229
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  

                                        -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                        K  N  Q  F  S  V  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  A  N  P  Y  Y  
                    Query_6236     184  AGAACCAGTTCTCCGTTAACTTGAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGATCACCTGCCAACCCCTACTACC  273
V  91.9% (228/248)  IGHV4-30-2*01  230  ..............C.G..GC....C..........................G...............----------------------  297
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
J  93.9% (46/49)    IGHJ6*02       8    ----------------------------------------------------------------------------------.......T  15

                                        ------------->                           
                                        H  A  L  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_6236     274  ACGCTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  314
J  93.9% (46/49)    IGHJ6*02       16   ...G.A...................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_114711

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           360     1e-101
IGHD5-18*01                                                                                           14.1    8.2   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGGA	AGTGATACA	ATACAGC	CCGA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTGGAAGTGATACAATACAGCCCGATGACTAC	TGSDTIQPDDY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	242	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6237   1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATTAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.3% (242/254)  IGHV3-49*04  47   .......................................................G..................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  N  S  Y  G  G  T  P  E  Y  A  A  S  V  K  R  R  F  T  I  S  R  D  
                    Query_6237   91   AGTGGGTTGGTTTCATTAGAAGCAATTCTTATGGTGGGACACCAGAATACGCCGCCTCTGTGAAACGCAGATTCACCATCTCAAGAGATG  180
V  95.3% (242/254)  IGHV3-49*04  137  .......A.................AG..............A.............G.........G........................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  R  N  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  G  S  D  T  I  Q  
                    Query_6237   181  ATTCCAGAAACATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTATTGCACTGGAAGTGATACAATACAGC  270
V  95.3% (242/254)  IGHV3-49*04  227  ......A..G......................................................C..T...A..----------------  300
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (7/7)     IGHD5-18*01  5    -----------------------------------------------------------------------------------.......  11

                                      ---------->                                  
                                      P  D  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6237   271  CCGATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (41/41)   IGHJ4*02     8    ----.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_174853

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            420     7e-120
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	274	5	0	98.2


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_6238  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  98.2% (274/279)  IGHV6-1*01  26   ...........................................................G......G....AG.................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_6238  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.2% (274/279)  IGHV6-1*01  116  ..........................................................................................  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_6238  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.2% (274/279)  IGHV6-1*01  206  ..............A...........................................................................  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------CDR3-IMGT--------->                                  
                                     C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6238  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  98.2% (274/279)  IGHV6-1*01  296  .........---------------------------------------------------------  304
                                     C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02    4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_114710

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     1e-124
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_6239   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  98.3% (284/289)  IGHV5-51*01  6    .............................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_6239   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6239   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6239   271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTAGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  97.9% (47/48)    IGHJ4*02     1    --------------------------------------------...............................G..............  46

                                        
                                        
                    Query_6239   361  AG  362
J  97.9% (47/48)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_295194

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           364     5e-103
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	113	1	0	99.1
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_6240   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  96.8% (241/249)  IGHV4-31*02  50   .....TCC...A....................................G.........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  
                    Query_6240   94   TGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCTA  183
V  96.8% (241/249)  IGHV4-31*02  140  ..............T......A...........................................G........................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A  
                    Query_6240   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCAA  273
V  96.8% (241/249)  IGHV4-31*02  230  .....................................................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD2-21*02  5    ----------------------------------------------------------------------..........G.......--  22

                                      ------------->                                  
                                      N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6240   274  ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (48/48)   IGHJ4*02     1    ................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_295197

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           367     5e-104
IGHD3-3*01                                                                                            39.1    2e-07 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	T	TTACGATTTTTTGAGTGGTTATT	N/A	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATTTACGATTTTTTGAGTGGTTATTACTTC	AIYDFLSGYYF	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	238	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6241   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (238/241)  IGHV4-34*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6241   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTGAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (238/241)  IGHV4-34*01  139  ..................................................C.......................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  I  Y  D  F  L  S  G  Y  Y  F 
                    Query_6241   181  CAGTTCTCCCTGAAACTGAGCTCTCTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGATTTACGATTTTTTGAGTGGTTATTACTTC  270
V  98.8% (238/241)  IGHV4-34*01  229  ..............G.........G....................................-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.7% (22/23)    IGHD3-3*01   4    --------------------------------------------------------------...........G...........-----  26
J  97.4% (38/39)    IGHJ4*02     10   -------------------------------------------------------------------------------------...A.  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6241   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  97.4% (38/39)    IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_295191

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           321     6e-90
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CTA	TGGGAGCTACTA	TCGA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTATGGGAGCTACTATCGATACTTTGACTAC	ARDYGSYYRYFDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	228	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  F  G  G  S  I  S  S  G  G  Y  S  W  N  W  I  R  Q  R  P  G  E  G 
                    Query_6242   1    ACCCTGTCCCTCACCTGCACTGTTTTTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAACTGGATCCGCCAGCGCCCAGGGGAGGGC  90
V  90.8% (228/251)  IGHV4-31*03  49   .......................C.C.............................A.....G..............A.......A.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  L  I  F  D  S  G  T  T  Y  Y  N  P  S  L  E  S  R  L  T  I  S  V  D  R  S 
                    Query_6242   91   CTGGAGTGGATTGGGCTCATCTTTGACAGTGGGACCACCTACTACAACCCGTCCCTCGAGAGTCGACTTACCATTTCAGTAGACCGGTCT  180
V  90.8% (228/251)  IGHV4-31*03  139  ...............TA.....A.T.........G......................A........G.......A.........AC....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  R  V  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  D  Y  G  S  Y  Y  R 
                    Query_6242   181  AAGAATCGGGTCTCCCTGAAGGTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTTCTGTGCGAGAGACTATGGGAGCTACTATCGA  270
V  90.8% (228/251)  IGHV4-31*03  229  .....C.A.T...........C...G...........................G....A............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD1-26*01  8    --------------------------------------------------------------------------............----  19

                                      ----------->                                  
                                       Y  F  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6242   271  TACTTTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.8% (45/46)    IGHJ4*02     3    ...................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_295190

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD6-19*01                                                                                           21.8    0.040
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	C	ATAGAAGTGGCTGG	CCGTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACATAGAAGTGGCTGGCCGTTTGATGCTTTCGAGATC	ARHRSGWPFDAFEI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  Y  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_6243   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATTATCACTACTGGAGCTGGATCCGGCAGTCTCCAGGGAAGGGACTGGAG  90
V  93.8% (228/243)  IGHV4-59*01  49   ........................................G.AG.T.......................C.C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  I  Y  N  P  S  L  E  S  R  V  T  I  S  A  D  T  S  K  K 
                    Query_6243   91   TGGATTGGCTATATCTATTACAGTGGGAGCACCATCTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAG  180
V  93.8% (228/243)  IGHV4-59*01  139  ........G.........................A................A.....................T...............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  A  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  R  S  G  W  P  F  D  A 
                    Query_6243   181  CAGTTCTCCCTGAAGCTGAGCGCTGTAACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGACATAGAAGTGGCTGGCCGTTTGATGCT  270
V  93.8% (228/243)  IGHV4-59*01  229  .....................T....G....................G............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  5    ----------------------------------------------------------------....C.........------------  18
J  88.0% (44/50)    IGHJ3*02     1    -----------------------------------------------------------------------------------.......  7

                                      -------->                                  
                                       F  E  I  W  G  Q  G  I  K  V  S  V  S  S  
                    Query_6243   271  TTCGAGATCTGGGGCCAGGGGATAAAGGTCTCCGTCTCTTCAG  313
J  88.0% (44/50)    IGHJ3*02     8    ..T..T...........A....C..T....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_295193

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           344     6e-97
IGHD1-26*01                                                                                           10.3    117  
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TAGTG	CGTCCGCTCGAGTTTTA	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATAGTGCGTCCGCTCGAGTTTTAGACGTC	ARDSASARVLDV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  D  T  S  G  F  T  F  S  S  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6244   1    GGTCCCTGAGACTCTCCTGTGACACCTCTGGATTCACCTTTAGTAGCCACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-74*01  47   .....................CAG................C......T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  S  T  D  G  S  R  T  T  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  T  
                    Query_6244   91   TGTGGGTCTCACGTATTAGTACTGATGGGAGTCGCACAACCTACGTGGACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  94.0% (235/250)  IGHV3-74*01  137  ..................A..G..........A......G.....C..........A.............................G...  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  A  S  A  R  V  
                    Query_6244   181  AGAACACACTGTATCTGCAATTGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGAGATAGTGCGTCCGCTCGAGTTT  270
V  94.0% (235/250)  IGHV3-74*01  227  .......G............A...............................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  5    ----------------------------------------------------------------------.....---------------  9

                                      ------->                                 
                                      L  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_6244   271  TAGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  311
J  97.4% (38/39)    IGHJ6*02     24   --............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_242613

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           400     9e-114
IGHD5-12*01                                                                                           18.0    0.65  
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGGGC	AGTGGCTAC	TACGGGGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGCAGTGGCTACTACGGGGGTGCTTTTGATATC	ARMGSGYYGGAFDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	272	16	0	94.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  S  H 
                    Query_6245   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGTCAT  91
V  94.4% (272/288)  IGHV1-18*01  7    .................................................A....................................CT..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  L  A  P  G  Q  G  L  E  W  M  G  Y  I  T  N  Y  N  N  N  T  D  Y  A  Q 
                    Query_6245   92   GGTATCAGCTGGGTGCGACTGGCCCCTGGACAAGGGCTTGAGTGGATGGGATACATCACCAATTACAATAATAACACAGACTATGCACAG  181
V  94.4% (272/288)  IGHV1-18*01  97   ...................A................................GG....G.GC.......GG.......A...........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  N  L  R  S  D  D  T  A 
                    Query_6245   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAATCTGAGATCTGACGACACGGCC  271
V  94.4% (272/288)  IGHV1-18*01  187  ...C...............................................................GC.....................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  F  Y  C  A  R  M  G  S  G  Y  Y  G  G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6245   272  GTGTTTTACTGTGCGAGAATGGGCAGTGGCTACTACGGGGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  359
V  94.4% (272/288)  IGHV1-18*01  277  ....A.............----------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (9/9)     IGHD5-12*01  9    ------------------------.........-------------------------------------------------------  17
J  100.0% (47/47)   IGHJ3*02     4    -----------------------------------------...............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_114715

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           346     2e-97
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	TAACATG	ATTACCATGAT	TCCA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGATAACATGATTACCATGATTCCAGATGCTTTTGATATC	AGDNMITMIPDAFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  S  S  I  N  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  A 
                    Query_6246   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTAGCTCCATCAACAGTGGAGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGCC  90
V  94.0% (236/251)  IGHV4-31*03  49   ..............................G.........G......T........................................G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  D  S  G  G  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_6246   91   CTGGAGTGGATTGGATACATCTATGACAGTGGGGGCACCTCCTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCACTAGACACGTCT  180
V  94.0% (236/251)  IGHV4-31*03  139  ..............G.........T........A......A...........................T.........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  G  D  N  M  I  T  M  I 
                    Query_6246   181  AGGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACTGTCGCGGACACGGCCGTATATTACTGTGCGGGAGATAACATGATTACCATGATT  270
V  94.0% (236/251)  IGHV4-31*03  229  .A...................C...............C...............G............A....-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD3-22*01  3    ------------------------------------------------------------------------------.....T.....-  13

                                      ----------------->                                  
                                       P  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6246   271  CCAGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  100.0% (49/49)   IGHJ3*02     2    ---.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_295199

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           349     3e-98
IGHD3-16*01                                                                                           18.0    0.64 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	278	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	277	114	95	13	6	83.3
CDR3-IMGT (germline)	278	283	6	6	0	0	100
Total	N/A	N/A	289	258	25	6	89.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P  R  Y
                    Query_6247   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCCGTTA  90
V  89.3% (258/289)  IGHV5-51*03  6    .......................................................T.....A....T..........GC..TA..A.C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_6247   91   TTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGTCC  180
V  89.3% (258/289)  IGHV5-51*03  96   C........C.......................................................G.....................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D  T  A
                    Query_6247   181  GGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACACTGC  264
V  89.3% (258/289)  IGHV5-51*03  186  .T.....C.A...................C...C........CAGCACC.C...............C..C.................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6247   265  CATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  353
V  89.3% (258/289)  IGHV5-51*03  276  ...G........T......----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD3-16*01  18   --------------------........T...---------------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    ---------------------------------------......T......G.................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_295198

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           332     3e-93
IGHD6-13*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTC	TAGCAGCATCTGG	GGGTGGCGCTCGCTCCCGCGGTGC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCTAGCAGCATCTGGGGGTGGCGCTCGCTCCCGCGGTGCGGACGTC	ATLAASGGGARSRGADV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	229	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  I  Y  G  M  H  W  V  R  Q  A  P  D  R  G  L  
                    Query_6248   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGACTCACCTTCAGTATCTATGGAATGCACTGGGTCCGCCAGGCTCCAGACAGGGGACTGG  90
V  93.1% (229/246)  IGHV3-33*01  47   ................................T............G......C.........................G..A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  V  G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6248   91   AGTGGGTGGCAGTTATATGGTATGTTGGAAGTAATAAATTTTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (229/246)  IGHV3-33*01  137  ........................A..............AC.................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  D  T  L  Y  L  Q  M  N  S  L  T  V  E  D  T  A  V  D  Y  C  A  T  L  A  A  S  G  G  G  
                    Query_6248   181  AGGACACGTTGTATCTGCAAATGAACAGTCTGACAGTGGAGGACACGGCTGTGGATTATTGTGCGACTCTAGCAGCATCTGGGGGTGGCG  270
V  93.1% (229/246)  IGHV3-33*01  227  ..A.....C...................C....G..CC...............T....C.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.3% (12/13)    IGHD6-13*01  6    ---------------------------------------------------------------------........G....--------  18

                                      GT-------------------->                                 
                                      A  R  S  R  G  A  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6248   271  CTCGCTCCCGCGGTGCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (40/40)   IGHJ6*02     23   ----------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_114714

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            339     2e-95
IGHD4-17*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAC	CTACGGTGACTAC	CTGGCAGGCCCCTGTAAGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACCTACGGTGACTACCTGGCAGGCCCCTGTAAGCTTGACTAC	ARTYGDYLAGPCKLDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  F  R  N  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6249   1    GGTCCCTGAGACTCTCCTGTGTAGGTTCTGGATTCACCTTTAGAAATTTTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  93.9% (232/247)  IGHV3-7*03   47   .....................C..CC.................T.GC.A....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  D  K  D  G  S  E  I  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6249   91   AGTGGGTGGCCAACATAGACAAAGATGGAAGTGAGATATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.9% (232/247)  IGHV3-7*03   137  .................A.GC...............A.....................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  S  L  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  T  Y  G  D  Y  L  A  
                    Query_6249   181  GGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTGTATTACTGTGCGAGGACCTACGGTGACTACCTGGCAG  270
V  93.9% (232/247)  IGHV3-7*03   227  A...........A...........................G..........................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (13/13)   IGHD4-17*01  4    ----------------------------------------------------------------------.............-------  16

                                      T------------------>                                  
                                      G  P  C  K  L  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_6249   271  GCCCCTGTAAGCTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  324
J  97.6% (41/42)    IGHJ4*02     7    ------------....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_264630

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           333     1e-93
IGHD3-10*01                                                                                           12.2    30   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAAAGTCAGGC	CGGGGA	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAAGTCAGGCCGGGGATTTGACTTC	AKKSGRGFDF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	23	1	0	95.8
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	23	1	0	95.8
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	229	221	8	0	96.5


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 
                    Query_6250   13   TGTGCAGCCTCTGGATTCACCTTCAGTAATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATT  102
V  96.5% (221/229)  IGHV3-48*03  64   ............................G.............................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  S  G  S  I  I  Y  Y  A  D  S  V  K  G  R  F  A  I  S  R  D  Y  S  K  N  S  L  Y  L 
                    Query_6250   103  AGTAGTAGTGGTAGTATCATATATTACGCAGACTCTGTGAAGGGCCGATTCGCCATCTCCAGAGACTACTCCAAAAACTCTCTGTATCTG  192
V  96.5% (221/229)  IGHV3-48*03  154  ................C......C...........................A..............A..G....G.....A.........  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------CDR3-IMGT--------->               
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  K  S  G  R  G  F  D  F  W  G  Q  G  T 
                    Query_6250   193  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAAAAAGTCAGGCCGGGGATTTGACTTCTGGGGCCAGGGAACC  282
V  96.5% (221/229)  IGHV3-48*03  244  .................................................-----------------------------------------  292
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  100.0% (6/6)     IGHD3-10*01  15   ------------------------------------------------------------......------------------------  20
J  97.6% (40/41)    IGHJ4*02     6    ------------------------------------------------------------------.......A................  29

                                                       
                                       L  V  T  V  S  S
                    Query_6250   283  CTGGTCACCGTCTCCTC  299
J  97.6% (40/41)    IGHJ4*02     30   .................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_264631

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           240     2e-65
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	240	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	42	9	0	82.4
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	92	22	0	80.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	198	45	0	81.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E  
                    Query_6251   4    CCCTGAGACTCTCCTGTACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAGT  93
V  81.5% (198/243)  IGHV4-59*01  50   .....TCC...A....C.....C.......G.......A...G..........AG......C........C.......A...........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N  
                    Query_6251   94   GGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAATC  183
V  81.5% (198/243)  IGHV4-59*01  140  ..A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------------------C
                                      Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  L  C  A  R  G  L  L  I  E  D  P  T  Y  
                    Query_6251   184  AGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATCTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACGTATG  273
V  81.5% (198/243)  IGHV4-59*01  230  ....C.....G..G....G.TC......................GTG...TA...........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  94.1% (16/17)    IGHD3-16*02  14   -----------------------------------------------------------------------------------------.  14

                                      DR3-IMGT-------------------------------->                                  
                                      V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_6251   274  TTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  348
D  94.1% (16/17)    IGHD3-16*02  15   ............A...-----------------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    --------------------------------...G....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_264632

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           438     5e-125
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ACCCTCGG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTCGGTGCTCTTGATATC	ARTLGALDI	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	284	4	0	98.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_6252   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTAT  91
V  98.6% (284/288)  IGHV1-18*01  7    ..........................................................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_6252   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAATTATGCACAG  181
V  98.6% (284/288)  IGHV1-18*01  97   ...................................G.........................C..................C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_6252   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  98.6% (284/288)  IGHV1-18*01  187  ...C......................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------CDR3-IMGT-------->                                  
                                       V  Y  Y  C  A  R  T  L  G  A  L  D  I  W  G  Q  G  A  M  V  T  V  S  S  
                    Query_6252   272  GTGTATTACTGTGCGAGAACCCTCGGTGCTCTTGATATCTGGGGCCAAGGGGCAATGGTCACCGTCTCTTCAG  344
V  98.6% (284/288)  IGHV1-18*01  277  ..................-------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                        
J  95.7% (45/47)    IGHJ3*02     4    --------------------------....T....................A.....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_264633

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           347     7e-98
IGHD3-9*01                                                                                            14.1    8.8  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCGAGGCGGACTTACTC	TATTTTG	CGCAGTTTGTGTCGTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATATCGAGGCGGACTTACTCTATTTTGCGCAGTTTGTGTCGTGCTTTGACTAC	AKDIEADLLYFAQFVSCFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6253   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTATGCCATGAGCTGGGTCCGCCAGGCGCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-23*01  47   ...........................................C..C..........................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  H  S  G  A  N  T  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  S  
                    Query_6253   91   AGTGGGTCTCAGCTATTAGTCATAGTGGTGCTAACACATATTACGCAGACTCCGTGAAGGGCCGGTTCATCATCTCCAGAGACAATTCCA  180
V  94.4% (236/250)  IGHV3-23*01  137  ....................GG........G..G......C............................C....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  D  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  I  E  A  D  L  L  
                    Query_6253   181  AGGACACAGTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCCGTCTATTACTGTGCGAAAGATATCGAGGCGGACTTACTCT  270
V  94.4% (236/250)  IGHV3-23*01  227  ..A....GC...............................G...........A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-9*01   10   -----------------------------------------------------------------------------------------.  10

                                      R3-IMGT------------------------>                                  
                                      Y  F  A  Q  F  V  S  C  F  D  Y  W  G  P  G  I  L  V  T  V  S  S  
                    Query_6253   271  ATTTTGCGCAGTTTGTGTCGTGCTTTGACTACTGGGGCCCGGGAATTCTGGTCACCGTCTCCTCAG  336
D  100.0% (7/7)     IGHD3-9*01   11   ......------------------------------------------------------------  16
J  93.2% (41/44)    IGHJ4*02     5    ----------------------.................A.....CC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_264634

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            394     7e-112
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_6254  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.4% (271/290)  IGHV1-8*02  6    ..................G..........................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_6254  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.4% (271/290)  IGHV1-8*02  96   ........A.........................................................C.......................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_6254  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.4% (271/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6254  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.4% (271/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_114717

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            377     8e-107
IGHD1-1*01                                                                                            10.3    114   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	TACAA	TA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTACAATAACTTTGACTAC	ARGYNNFDY	241	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	112	2	0	98.2
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	244	3	0	98.8


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_6255  1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  98.8% (244/247)  IGHV4-4*01  49   .......................C..................................................................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  P  K 
                    Query_6255  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGCCCAAG  180
V  98.8% (244/247)  IGHV4-4*01  139  ....................................................................................T.....  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->   
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  N  N  F  D  Y  W 
                    Query_6255  181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTACAATAACTTTGACTACTGG  270
V  98.8% (244/247)  IGHV4-4*01  229  .......................................................G...........-----------------------  295
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (5/5)     IGHD1-1*01  3    ---------------------------------------------------------------------.....----------------  7
J  100.0% (45/45)   IGHJ4*02    4    ----------------------------------------------------------------------------..............  17

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_6255  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (45/45)   IGHJ4*02    18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_264636

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           286     1e-79
IGHD3-16*01                                                                                           12.2    31   
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	TTGGGG	CACCGCCCCAGTATGGG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGGGGCACCGCCCCAGTATGGGATGGACGTC	ARVGAPPQYGMDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	216	33	0	86.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  Y  T  F  S  D  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6256   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGGTACACATTTAGCGACTACGGCATGAACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  86.7% (216/249)  IGHV3-33*01  47   ...............................A.T...C..C..TAG...T......C.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  F  D  G  S  K  Q  F  Y  G  D  S  V  R  G  R  F  T  I  S  K  D  N  S  
                    Query_6256   91   AGTGGGTGGCTATCATCTGGTTTGATGGAAGTAAGCAATTTTATGGGGACTCCGTGAGGGGCCGATTCACCATCTCCAAAGACAATTCCA  180
V  86.7% (216/249)  IGHV3-33*01  137  ..........AG.T..A....A............TA...AC....CA..........A....................G...........  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  V  S  L  Q  M  N  S  L  R  S  D  D  S  A  V  Y  Y  C  A  R  V  G  A  P  P  Q  Y  
                    Query_6256   181  AGAACACGGTGTCTCTACAAATGAACAGCCTGAGAAGTGACGATTCGGCTGTCTACTACTGTGCGAGAGTTGGGGCACCGCCCCAGTATG  270
V  86.7% (216/249)  IGHV3-33*01  227  ........C...A...G..................GCC..G..CA.......G..T.............---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  16   ---------------------------------------------------------------------......---------------  21

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6256   271  GGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (42/42)   IGHJ6*02     21   --..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_264637

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	73	1	0	98.6
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	280	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  
                    Query_6257   5    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCA  94
V  95.6% (280/293)  IGHV5-51*03  2    ....G............................................................................G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  
                    Query_6257   95   GCTACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACA  184
V  95.6% (280/293)  IGHV5-51*03  92   ............G.......................A...................................A....G.....A......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  
                    Query_6257   185  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACA  274
V  95.6% (280/293)  IGHV5-51*03  182  .................................................C...........G...............A.....T......  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_6257   275  CCGCCGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  364
V  95.6% (280/293)  IGHV5-51*03  272  .....A.G...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD6-19*01  5    --------------------------............----------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_6257   365  CCTCAG  370
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_264638

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD2-2*02                                                                                            12.2    32    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCA	CTGGTATAC	TTACGTCAGCGGGGGATATG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTGGTATACTTACGTCAGCGGGGGATATGTTGACTAC	ARGHWYTYVSGGYVDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6258   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S 
                    Query_6258   91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGCTACCATATCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ................A.................G................................T......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  W  Y  T  Y  V 
                    Query_6258   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCACTGGTATACTTACGTC  270
V  97.6% (244/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (8/9)      IGHD2-2*02   22   --------------------------------------------------------------------------...C.....-------  30

                                      GT------------------>                                  
                                       S  G  G  Y  V  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_6258   271  AGCGGGGGATATGTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  325
J  97.6% (41/42)    IGHJ4*02     7    -------------.............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_264639

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*05                                                                                           333     1e-93
IGHD3-22*01                                                                                           44.9    5e-09
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*05	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGG	ATTACTTTGATAGTAGTGGTTATTAC	CGGTCGAACTATCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGATTACTTTGATAGTAGTGGTTATTACCGGTCGAACTATCCTTTTGAGTAC	ARGDYFDSSGYYRSNYPFEY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6259   1    GGTCCCTGAGACTCTCCTGTGTAGCGTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-33*05  47   .....................C........................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  F  A  G  D  Y  K  Y  Y  A  D  S  V  R  G  R  F  S  I  S  R  D  N  S  
                    Query_6259   91   AGTGGGTGGCAGTTATATCTTTTGCTGGGGATTATAAGTATTATGCAGACTCCGTGAGGGGCCGGTTCTCCATCTCCAGAGACAATTCCA  180
V  92.8% (231/249)  IGHV3-33*05  137  ...................A.A..A...AAG.A....A..C................A......A...A.....................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  G  D  Y  F  D  S  S  
                    Query_6259   181  AGAACACGCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAGAGGGGATTACTTTGATAGTAGTG  270
V  92.8% (231/249)  IGHV3-33*05  227  ............A....................................TG.G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  96.2% (25/26)    IGHD3-22*01  3    ------------------------------------------------------------------------......A...........  20

                                      R3-IMGT------------------------>                                  
                                      G  Y  Y  R  S  N  Y  P  F  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6259   271  GTTATTACCGGTCGAACTATCCTTTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  96.2% (25/26)    IGHD3-22*01  21   ........----------------------------------------------------------  28
J  97.7% (42/43)    IGHJ4*02     6    -----------------------.....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_152779

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD2-15*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TTACAAATCTGGGGATA	CTACTCC	TTTCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATTACAAATCTGGGGATACTACTCCTTTCCACTTTGACTCC	AKDYKSGDTTPFHFDS	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	24	17	4	3	70.8
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	250	229	18	3	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  A  M  S  W  V  R  Q  A  P  G  Q  G  L  
                    Query_6260   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGCAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-23*01  47   ...............................................T..........C.....................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  I  I  T     S  G  G  E  T  Y  Y  T  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_6260   91   AGTGGGTCTCAATTATTACT---AGTGGTGGTGAGACATACTACACAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  177
V  91.6% (229/250)  IGHV3-23*01  137  ...........GC.....G.GGT.........AGC.........G..........................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      I  N  A  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  Y  K  S  G  D  T  
                    Query_6260   178  TAAACGCGCTGTCTCTCCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATTACAAATCTGGGGATACTA  267
V  91.6% (229/250)  IGHV3-23*01  227  AG...A......A...G...................................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD2-15*01  25   ---------------------------------------------------------------------------------------...  27

                                      T------------------>                                
                                      T  P  F  H  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6260   268  CTCCTTTCCACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
D  100.0% (7/7)     IGHD2-15*01  28   ....------------------------------------------------  31
J  97.7% (42/43)    IGHJ4*02     4    ---------.........A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_242617

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           265     5e-73
IGHD3-16*01                                                                                           18.0    0.61 
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACAACG	TATGCTTAT	GTCAGTGCTTGGGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAACGTATGCTTATGTCAGTGCTTGGGGATGATGCTTTTGATGTC	ARRQRMLMSVLGDDAFDV	246	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	23	7	0	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	97	17	0	85.1
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	209	40	0	83.9


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  V  T  T  T  R  Y  S  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_6261   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTCCGTCACCACTACTAGATACTCCTGGGGTTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  83.9% (209/249)  IGHV4-39*01  50   .....TCC...A....C.............G....A...G..G..G...T....A......C..........................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Q  M  F  Y  G  G  S  T  Y  Q  N  P  S  L  N  S  R  V  T  V  S  V  D  P  S  
                    Query_6261   94   TGGAATGGATTGGGCAGATGTTCTATGGTGGGAGCACGTACCAGAACCCGTCGCTGAATAGTCGAGTCACCGTGTCCGTTGACCCGTCCA  183
V  83.9% (209/249)  IGHV4-39*01  140  ....G.........AGT..C.AT...A..........C...T.C........C..C..G............A.A.....A...A......  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  S  Q  F  F  L  N  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  R  Q  R  M  L  M  S  
                    Query_6261   184  AGAGTCAGTTCTTCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCTGTATATTATTGTGCGAGACGACAACGTATGCTTATGTCAG  273
V  83.9% (209/249)  IGHV4-39*01  230  ...AC.......C......G....G...................A.......G.....C..........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD3-16*01  26   ----------------------------------------------------------------------------.........-----  34

                                      IMGT--------------------->                                  
                                      V  L  G  D  D  A  F  D  V  W  G  Q  G  T  G  V  T  V  S  S  
                    Query_6261   274  TGCTTGGGGATGATGCTTTTGATGTCTGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  333
J  96.0% (48/50)    IGHJ3*01     1    ----------...............................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_206115

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           319     2e-89
IGHD3-3*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGGCGACTT	CGATTTTTGGA	ATAGC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGGCGACTTCGATTTTTGGAATAGCCTACGTTGATTAC	AREGATSIFGIAYVDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  D  Y  F  M  S  W  I  R  Q  V  P  G  K  G  L  
                    Query_6262   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATGACTACTTCATGAGCTGGATCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-11*01  47   ..........................................G........A....................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  G  P  S  A  S  T  L  F  Y  A  D  S  V  R  G  R  F  T  V  S  R  D  N  A  
                    Query_6262   91   AATGGGTTTCATACATTGGTCCTAGTGCTTCCACCTTATTTTACGCTGACTCTGTGAGGGGCCGATTCACCGTCTCAAGGGACAACGCCA  180
V  90.8% (227/250)  IGHV3-11*01  137  .G...............A..AG.....G.AGT...A...AC.....A..........A.............A....C.............  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  H  L  Q  M  D  S  L  T  A  E  D  S  A  V  Y  Y  C  A  R  E  G  A  T  S  I  F  
                    Query_6262   181  AGAACTCACTGCATCTGCAAATGGACAGCCTGACAGCCGAGGACTCGGCCGTCTATTACTGTGCGAGAGAGGGGGCGACTTCGATTTTTG  270
V  90.8% (227/250)  IGHV3-11*01  227  ...........T...........A.........G..........A.......G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-3*01   7    ---------------------------------------------------------------------------------.........  15

                                      T------------------>                                  
                                      G  I  A  Y  V  D  Y  W  G  Q  G  S  L  V  S  V  S  S  
                    Query_6262   271  GAATAGCCTACGTTGATTACTGGGGCCAGGGATCCCTGGTCTCCGTCTCCTCAG  324
D  100.0% (11/11)   IGHD3-3*01   16   ..----------------------------------------------------  17
J  91.5% (43/47)    IGHJ4*02     2    -------....T....C...............A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_206114

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           339     2e-95
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TGTCTCCA	GACTACGGTGAC	GCT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTGTCTCCAGACTACGGTGACGCTTTTCACGAC	AKVSPDYGDAFHD	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6263   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTACCTTTAGCAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  93.6% (233/249)  IGHV3-23*01  47   ..................................C...........C......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  L  S  G  R  G  G  S  S  Y  Y  A  D  S  V  K  G  R  C  T  I  S  R  D  N  S  
                    Query_6263   91   AGTGGGTCTCACATTTGAGTGGTCGTGGTGGCAGTTCATACTACGCAGATTCCGTGAAGGGCCGGTGCACCATCTCCAGAGACAATTCCA  180
V  93.6% (233/249)  IGHV3-23*01  137  ...........GC.A.T......A.......T..CA.............C................T.......................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  K  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  V  S  P  D  Y  G  D  
                    Query_6263   181  AGAAGACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTTTATTACTGTGCGAAAGTGTCTCCAGACTACGGTGACG  270
V  93.6% (233/249)  IGHV3-23*01  227  ....C.............................................G.A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD4-17*01  2    -----------------------------------------------------------------------------............-  13

                                      ---------->                                  
                                      A  F  H  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6263   271  CTTTTCACGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  95.3% (41/43)    IGHJ4*02     6    --...G..T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_309560

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           347     7e-98
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATAG	GGGTG	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATAGGGGTGACTATTTTGACTAC	ARGLHYYDRGDYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6264   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTCACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.4% (236/250)  IGHV4-31*03  49   ..................................C......C.........T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_6264   91   CTGGAGTGGATTGGGTTCATTTATTACAGTGGGACCACCTACTACAATAAGTCCCTCAAGAGTCGAGTCACCATATCGGTAGACACGTCT  180
V  94.4% (236/250)  IGHV4-31*03  139  ................A...C.............G............CCC..................T........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R 
                    Query_6264   181  AAGAACCAGTTCTCCCTGAATCTGCGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCTCCATTACTATGATAGG  270
V  94.4% (236/250)  IGHV4-31*03  229  ....................G...A.............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD3-22*01  3    ----------------------------------------------------------------------------.............-  15

                                      ----------------->                                  
                                       G  D  Y  F  D  Y  W  G  Q  G  I  L  V  P  V  S  S  
                    Query_6264   271  GGTGACTATTTTGACTACTGGGGCCAGGGAATCCTGGTCCCCGTCTCCTCAG  322
J  93.8% (45/48)    IGHJ4*02     1    ----....C......................C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_206116

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           327     9e-92
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGCCGAAATC	GTATTACGACTTTTGGA	ATCCTTACTCTCGGCTCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCGAAATCGTATTACGACTTTTGGAATCCTTACTCTCGGCTCCTTCGACCCC	ARGGRNRITTFGILTLGSFDP	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  C  G  G  S  F  S  D  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_6265   1    ACCCTGTCCCTCACCTGCGCTGTCTGTGGTGGGTCCTTCAGTGATCATTATTGGAGCTGGATCCGCCAGTCTCCAGGGAAGGGGCTGGAA  90
V  92.7% (227/245)  IGHV4-34*01  49   .........................A.................G.T.C..C..................C.C.................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_6265   91   TGGATTGGGGAGATCAACCATAGTGGAAGCACCAACTACAACCCGTCTCTCAAGAGTCGAGTCACCATATCAGCGGACACGTCTAAGAAC  180
V  92.7% (227/245)  IGHV4-34*01  139  ...........A.....T.............................C.........................TA........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  K  L  I  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  G  R  N  R  I  T  T  F 
                    Query_6265   181  CAGTTCTCCCTGAAGCTGATCTCTGTGACCGCCGCAGACACGGCTGTATATTTCTGTGCGAGAGGGGGCCGAAATCGTATTACGACTTTT  270
V  92.7% (227/245)  IGHV4-34*01  229  ...................G...............G...........G....A............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  94.1% (16/17)    IGHD3-3*01   1    ----------------------------------------------------------------------------.........T....  14

                                      MGT-------------------------->                                  
                                       G  I  L  T  L  G  S  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_6265   271  GGAATCCTTACTCTCGGCTCCTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  334
D  94.1% (16/17)    IGHD3-3*01   15   ...-------------------------------------------------------------  17
J  97.7% (42/43)    IGHJ5*02     9    ---------------------.........................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_206111

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           260     1e-71
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	93	21	0	81.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	205	39	0	84


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_6266   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  84.0% (205/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_6266   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  84.0% (205/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_6266   181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCACGTAT  270
V  84.0% (205/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_6266   271  GTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    ---------------------------------...G....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_206110

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         389     2e-110
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              54.5    1e-11 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCTTAAGGTCAATCGCGTC	CAGTGGCTGG	GCGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCA	ARHPLRSIASSGWAS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_6267     1    GCAGCTGGTGCAGTCTGGAGGAGAGGTGAAGAAGCCCGGGGAGTCTTTGAGGATTTCCTGTAAGGCTTCTGGATACACCTTTACCAACTA  90
V  93.1% (269/289)  IGHV5-10-1*01  6    ....................C.........A...............C.......C..........G...........G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  S  Y  S  P
                    Query_6267     91   CTGGATCAGCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGACCCTAGTGACTCTTATACCAGCTACAGTCC  180
V  93.1% (269/289)  IGHV5-10-1*01  96   ......................A.....................................T...................A......C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  D  G  N  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  M  A  S  D  T  A
                    Query_6267     181  GTCCTTCGACGGCAACGTCACCATCTCAGTTGACAAGTCCATCAGTACTGCCTATTTGCAGTGGAGCAGCCTGATGGCCTCGGACACCGC  270
V  93.1% (269/289)  IGHV5-10-1*01  186  .......C.A...C...............C...............C........CC..................A...............  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          M  Y  Y  C  A  R  H  P  L  R  S  I  A  S  S  G  W  A  S  W  G  Q  R  T  P  V  T  V  S  S
                    Query_6267     271  CATGTATTATTGTGCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCATGGGGCCAGAGAACCCCGGTCACCGTCTCCTC  360
V  93.1% (269/289)  IGHV5-10-1*01  276  .........C.........-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD6-19*01    9    ------------------------------------------..........--------------------------------------  18
J  94.1% (32/34)    IGHJ4*02       15   ----------------------------------------------------------.........G......T...............  46

                                          
                                          
                    Query_6267     361  AG  362
J  94.1% (32/34)    IGHJ4*02       47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_309564

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           318     6e-89
IGHD4-17*01                                                                                           14.1    8.5  
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGAATAC	AG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGAATACAGCAACTGGGTCGACCCC	ARDSGEYSNWVDP	250	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	135	27	19	2	6	70.4
FR3-IMGT	136	249	114	104	10	0	91.2
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	232	19	6	90.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  V  S  S  G  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_6268   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCGTCAGCAGTGGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGG  90
V  90.3% (232/257)  IGHV4-61*01  49   ...................C...........G.............................G...........................A  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  H  I  Y  N  Y  N  R  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D 
                    Query_6268   91   CTGGAGTGGATCGGTCATATCTATAACTATAACAGAGGGAGCACCAATTATAATCCCTCCCTCCAAAGTCGAGTCACTATATCAGTAGAC  180
V  90.3% (232/257)  IGHV4-61*01  139  ...........T..GT........T..------..T...........C..C..C.........A.G...........C............  222
                                       L  E  W  I  G  Y  I  Y  Y        S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------CDR3-I
                                       T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  G  E  Y 
                    Query_6268   181  ACATCCAAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATTCCGGTGAATAC  270
V  90.3% (232/257)  IGHV4-61*01  223  ..G........................C...G...........................G.................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  90.0% (9/10)     IGHD4-17*01  7    --------------------------------------------------------------------------------......C...  16

                                      MGT-------------->                                  
                                       S  N  W  V  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6268   271  AGCAACTGGGTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  98.0% (49/50)    IGHJ5*02     2    --.......T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_309565

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           349     2e-98
IGHD5-12*01                                                                                           18.0    0.60 
IGHJ2*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGAAATGTATGAT	TATAGTGGC	ACAATATAT	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGAAATGTATGATTATAGTGGCACAATATATTGGTACTTCGATCTC	ARQEMYDYSGTIYWYFDL	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  S  R  S  Y  P  W  G  W  V  R  Q  P  P  R  K  G 
                    Query_6269   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGCAGTAGGAGCTACCCCTGGGGCTGGGTCCGCCAGCCCCCACGGAAGGGG  90
V  94.4% (237/251)  IGHV4-39*01  49   ......................................C........T..T...TA..........A..............G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  N  S  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  H  T  S 
                    Query_6269   91   CTGGAGTGGATTGGGACTATCTATAATAGTGGGAGGACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTACACACGTCG  180
V  94.4% (237/251)  IGHV4-39*01  139  ................G.......T..........C.............................................G.......C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       N  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  E  M  Y  D  Y  S 
                    Query_6269   181  AACAACCAGTTCTCCCTGCAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACAAGAAATGTATGATTATAGT  270
V  94.4% (237/251)  IGHV4-39*01  229  ..G...............A....................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD5-12*01  6    ------------------------------------------------------------------------------------......  11

                                      -IMGT--------------------->                                  
                                       G  T  I  Y  W  Y  F  D  L  W  G  R  G  S  L  V  T  V  S  S  
                    Query_6269   271  GGCACAATATATTGGTACTTCGATCTCTGGGGCCGTGGCTCCCTGGTCACTGTCTCCTCAG  331
D  100.0% (9/9)     IGHD5-12*01  12   ...----------------------------------------------------------  14
J  98.0% (48/49)    IGHJ2*01     5    ------------...........................A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_309568

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           352     3e-99
IGHD3-16*01                                                                                           18.0    0.65 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	70	4	0	94.6
CDR1-IMGT	77	100	24	17	7	0	70.8
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	283	114	95	13	6	83.3
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	293	261	26	6	89.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P  
                    Query_6270   3    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCC  92
V  89.1% (261/293)  IGHV5-51*03  2    ..G........................................................T.....A....T..........GC..TA..A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      R  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  
                    Query_6270   93   GTTATTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACA  182
V  89.1% (261/293)  IGHV5-51*03  92   .C..C........C.......................................................G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D  
                    Query_6270   183  GTCCGGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACA  266
V  89.1% (261/293)  IGHV5-51*03  182  .C...T.....C.A...................C...C........CAGCACC.C...............C..C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S  
                    Query_6270   267  CTGCCATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCTT  356
V  89.1% (261/293)  IGHV5-51*03  272  .C.....G........T......-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  91.7% (11/12)    IGHD3-16*01  18   ------------------------........T...------------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    -------------------------------------------......T......G.................A...............  47

                                         
                                      S  
                    Query_6270   357  CAG  359
J  94.0% (47/50)    IGHJ3*01     48   ...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_336246

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            282     3e-78
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	98	16	0	86
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	213	33	0	86.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_6271   1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  86.6% (213/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_6271   91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCACCATCTCAGTAGACAAGTCCAAG  180
V  86.6% (213/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A................A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  A  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_6271   181  AATCAATTCTCCCTGGCGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  86.6% (213/246)  IGHV4-4*01   229  ..C..G.........AA.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_6271   271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_206118

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            346     2e-97
IGHD3-3*01                                                                                            21.8    0.044
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAG	CGATTTGTGGAGAGGTT	CTACCCCTAAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGAGATAGCGATTTGTGGAGAGGTTCTACCCCTAAGTTTGACTAC	ARDSDLWRGSTPKFDY	269	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	40	5	0	88.9
CDR1-IMGT	47	76	30	25	5	0	83.3
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	154	27	26	1	0	96.3
FR3-IMGT	155	268	114	102	12	0	89.5
CDR3-IMGT (germline)	269	276	8	7	1	0	87.5
Total	N/A	N/A	275	248	27	0	90.2


Alignments

                                     <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                      L  V  K  P  T  Q  T  L  S  L  T  C  T  I  S  G  D  S  V  S  S  E  S  V  A  W  N  W  V  R 
                    Query_6272  2    CTGGTGAAACCCACACAGACTCTCTCACTCACCTGTACCATCTCCGGAGACAGTGTCTCCAGCGAAAGTGTTGCTTGGAACTGGGTCAGG  91
V  90.2% (248/275)  IGHV6-1*01  31   ........G...T.G.....C...............G..........G...........T...A.C....C.............A.....  120
                                      L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                     ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                      Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  M  S  K  W  Y  N  H  Y  S  D  S  V  K  S  R 
                    Query_6272  92   CAGTCGCCGTCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACATGTCCAAGTGGTATAATCATTATTCAGATTCTGTGAAAAGTCGA  181
V  90.2% (248/275)  IGHV6-1*01  121  .....C..A.....................................G................G.....G...TA...............  210
                                      Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                     --------------------------FR3-IMGT----------------------------------------------------><--
                                      M  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  M  N  S  V  T  P  E  D  T  A  M  Y  Y  C  A 
                    Query_6272  182  ATGACCATCGACCCAGACACATCCAAGAACCAGTTCTCGCTACAGATGAACTCTGTGACCCCCGAGGACACGGCTATGTACTACTGTGCT  271
V  90.2% (248/275)  IGHV6-1*01  211  ..A......A............................C..G...C.............T...............G....T........A  300
                                      I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                     -----------------CDR3-IMGT------------------>                                  
                                      R  D  S  D  L  W  R  G  S  T  P  K  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_6272  272  AGAGATAGCGATTTGTGGAGAGGTTCTACCCCTAAGTTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  350
V  90.2% (248/275)  IGHV6-1*01  301  .....--------------------------------------------------------------------------  305
                                      R                                                                             
D  88.2% (15/17)    IGHD3-3*01  7    --------......T.....T....------------------------------------------------------  23
J  97.7% (42/43)    IGHJ4*02    6    ------------------------------------.....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_40149

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           402     3e-114
IGHD5-12*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTAAACGAAA	ATAGTGGCTACGATTA	TGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTAAACGAAAATAGTGGCTACGATTATGCTGACTAC	ARLNENSGYDYADY	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	73	1	0	98.6
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	275	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  A  
                    Query_6273   4    AGGTCCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTGCCA  93
V  93.9% (275/293)  IGHV1-18*04  2    ....T............................................................................C....A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  S  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  F  S  T  Y  N  G  D  T  N  Y  
                    Query_6273   94   GCTACTCTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGTCTTGAGTGGATGGGACGGTTCAGCACTTACAATGGTGACACAAATTATG  183
V  93.9% (275/293)  IGHV1-18*04  92   .....GG.A...............................G...............T..A.....G...........A.......C....  181
                                      S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  N  L  Q  D  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  
                    Query_6273   184  CACAGAACCTCCAGGACAGAGTCACCCTGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTTAGATCTGACGACA  273
V  93.9% (275/293)  IGHV1-18*04  182  .......G.......G..........A.................................................G.............  271
                                      A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  V  Y  Y  C  A  R  L  N  E  N  S  G  Y  D  Y  A  D  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_6273   274  CGGCCGTTTATTATTGTGCGAGATTAAACGAAAATAGTGGCTACGATTATGCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  363
V  93.9% (275/293)  IGHV1-18*04  272  .......G.....C.........-------------------------------------------------------------------  294
                                      T  A  V  Y  Y  C  A  R                                                                    
D  100.0% (16/16)   IGHD5-12*01  7    ---------------------------------................-----------------------------------------  22
J  100.0% (39/39)   IGHJ4*02     8    ----------------------------------------------------......................................  45

                                       
                                      S
                    Query_6273   364  C  364
J  100.0% (39/39)   IGHJ4*02     46   .  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_40148

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         349     2e-98
IGHD5-12*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGAGGAT	TGGCTACGA	GACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGACCCCCTTTGACCTC	ARAGRIGYETPFDL	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_6274     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTACTCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  95.1% (235/247)  IGHV4-38-2*02  49   ................................................T.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K 
                    Query_6274     91   GAGTGGATTGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAG  180
V  95.1% (235/247)  IGHV4-38-2*02  139  ......................A.........C.........A..............A........................C.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  Q  F  S  L  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  T 
                    Query_6274     181  AACCAGTTCTCGTTGAATCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGAGCGGGGAGGATTGGCTACGAGACC  270
V  95.1% (235/247)  IGHV4-38-2*02  229  ...........CC....G....G...........C...............G................-----------------------  295
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD5-12*01    11   -----------------------------------------------------------------------------.........----  19

                                        ----------->                                  
                                         P  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6274     271  CCCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.5% (42/44)    IGHJ4*02       5    --.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_342490

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     9e-100
IGHD3-16*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTTTAC	TACGTTTGGGGGAGT	CCAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTTTACTACGTTTGGGGGAGTCCATCTACTTTGACTAC	ARSLLRLGESIYFDY	247	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	60	33	26	4	3	78.8
FR2-IMGT	61	111	51	50	1	0	98
CDR2-IMGT	112	132	21	20	1	0	95.2
FR3-IMGT	133	246	114	112	2	0	98.2
CDR3-IMGT (germline)	247	252	6	6	0	0	100
Total	N/A	N/A	252	241	8	3	95.6


Alignments

                                      <--------FR1-IMGT---------><-----------CDR1-IMGT-----------><--------------------FR2-IMGT-
                                       T  L  S  L  T  C  T  V  S  G  A  P  P  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K 
                    Query_6275   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCCCCCCCATCAGCAGTGGCGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAG  90
V  95.6% (241/252)  IGHV4-31*03  49   ...............................G.T..---...........T...T...................................  135
                                       T  L  S  L  T  C  T  V  S  G  G  S     I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K 

                                      --------------------><-----CDR2-IMGT-----><-----------------------------------------------
                                       G  L  E  W  I  G  C  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  F  T  I  S  V  D  T 
                    Query_6275   91   GGCCTGGAGTGGATTGGGTGCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGATTTACCATATCAGTGGACACG  180
V  95.6% (241/252)  IGHV4-31*03  136  ...................A.................G...............................G.............A......  225
                                       G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T 

                                      -----FR3-IMGT----------------------------------------------------><-----------------CDR3-I
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  L  R  L  G 
                    Query_6275   181  TCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGATCTTTACTACGTTTGGGG  270
V  95.6% (241/252)  IGHV4-31*03  226  ........................................................................------------------  297
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                   
D  100.0% (15/15)   IGHD3-16*01  11   -------------------------------------------------------------------------------...........  21

                                      MGT----------------->                                  
                                       E  S  I  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_6275   271  GAGTCCATCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  325
D  100.0% (15/15)   IGHD3-16*01  22   ....---------------------------------------------------  25
J  97.9% (46/47)    IGHJ4*02     2    --------....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_40143

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            353     9e-100
IGHD2-21*01                                                                                           10.3    121   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	GGTGA	AAAC	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTAGAGAGGGTGAAAACTACTATTTCTATTACGTTATGGACGTC	VREGENYYFYYVMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	5	3	0	62.5
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  F  D  D  F  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6276   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCCCCTTTGATGATTTTGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  95.2% (238/250)  IGHV3-9*01   47   ...............................A...A............A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  D  T  I  G  Y  A  D  S  V  K  G  R  V  T  I  S  R  D  N  A  
                    Query_6276   91   AGTGGGTCTCAGGAATTAGTTGGAATAGTGATACCATAGGCTATGCGGACTCTGTGAAGGGCCGAGTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-9*01   137  .............T................G..G...............................T........................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  N  L  R  P  E  D  T  A  L  Y  Y  C  V  R  E  G  E  N  Y  Y  F  
                    Query_6276   181  AGAACTCCCTGTATCTGCAAATGAACAATCTGAGACCTGAGGACACGGCCTTGTATTACTGTGTTAGAGAGGGTGAAAACTACTATTTCT  270
V  95.2% (238/250)  IGHV3-9*01   227  ...........................G.......G...........................CA.A...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD2-21*01  14   -----------------------------------------------------------------------.....--------------  18
J  93.3% (56/60)    IGHJ6*02     3    --------------------------------------------------------------------------------.....C.A..  12

                                      ---------------->                                 
                                      Y  Y  V  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6276   271  ATTACGTTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  93.3% (56/60)    IGHJ6*02     13   .C....G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_40142

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           316     2e-88
IGHD6-19*01                                                                                           12.2    33   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	44	6	0	88
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	46	5	0	90.2
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	100	14	0	87.7
CDR3-IMGT (germline)	261	268	8	7	1	0	87.5
Total	N/A	N/A	268	235	33	0	87.7


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  
                    Query_6277   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACTTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCC  90
V  87.7% (235/268)  IGHV4-34*01  26   ........T.......T....................C........CTA..G..G......C.................C...A.C....  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  G  W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  
                    Query_6277   91   AGCCCCCAGGGAAGGGACTGGGGTGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCA  180
V  87.7% (235/268)  IGHV4-34*01  116  ................G....A.................A............CA.C.AC......C..T......A..............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      M  S  V  D  T  S  K  K  Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_6277   181  TGTCAGTAGACACGTCCAAGAAACAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGG  270
V  87.7% (235/268)  IGHV4-34*01  206  .A....................C..GT...........C..A......T.....................G.....C......A....--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------------------.  13

                                      -------CDR3-IMGT--------------->                                  
                                      G  W  R  R  Q  R  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6277   271  GCTGGCGAAGACAGCGCAACTGGTTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  336
D  100.0% (6/6)     IGHD6-19*01  14   .....-------------------------------------------------------------  18
J  98.0% (49/50)    IGHJ5*02     2    ----------------..............................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_40141

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           374     8e-106
IGHD6-19*01                                                                                           12.2    35    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	GCTCCAG	GGCTGG	GATT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCCAGGGCTGGGATTCTTTGACTAT	AAPGLGFFDY	292	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	69	6	0	92
CDR1-IMGT	79	102	24	18	6	0	75
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	104	10	0	91.2
CDR3-IMGT (germline)	292	294	3	3	0	0	100
Total	N/A	N/A	291	265	26	0	91.1


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  A  S  G  N  T  L  T 
                    Query_6278   4    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCGTCAGTGAAAGTTGCCTGCAAGGCATCCGGAAACACCCTCACC  93
V  91.1% (265/291)  IGHV1-46*01  1    ...G...................G.......................C........G...T.............T...T.....T.....  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  N  F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  N  K  T  T  Y 
                    Query_6278   94   AACAACTTCATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTAATAAGACAACCTAT  183
V  91.1% (265/291)  IGHV1-46*01  91   .G.T...AT..................................................................GG..GC....G...C  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  L  T  M  T  R  V  T  S  T  R  T  V  Y  M  E  L  S  N  L  R  S  E  D 
                    Query_6278   184  GCACAGAAGTTCCAGGGCAGACTGACCATGACTAGGGTCACGTCCACGAGAACAGTCTACATGGAGCTGAGCAACCTGAGATCTGAGGAC  273
V  91.1% (265/291)  IGHV1-46*01  181  .....................G.C........C....A............C......................G................  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------CDR3-IMGT--------->                                  
                                       P  A  V  Y  Y  C  A  A  P  G  L  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_6278   274  CCGGCCGTGTATTACTGCGCGGCTCCAGGGCTGGGATTCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  355
V  91.1% (265/291)  IGHV1-46*01  271  A................T...-------------------------------------------------------------  291
                                       T  A  V  Y  Y  C  A                                                              
D  100.0% (6/6)     IGHD6-19*01  13   ----------------------------......------------------------------------------------  18
J  95.5% (42/44)    IGHJ4*02     5    --------------------------------------.........C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_40140

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            274     8e-76
IGHD1-26*01                                                                                           10.3    117  
IGHJ6*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACTTTCGCTTCGC	ACTAC	CTACATT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACTTTCGCTTCGCACTACCTACATTTGGACGTC	ARTFASHYLHLDV	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	53	27	20	4	3	74.1
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	247	213	31	3	86.2


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  G  S  I  T     N  Q  W  W  T  W  V  R  Q  P  P  G  R  G  
                    Query_6279   1    GGTCCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATCAC---TAATCAGTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAGGGGGC  87
V  86.2% (213/247)  IGHV4-4*01   47   ..A.....TCC...A....C......................GCAG..G.A.C.......G.......................A.....  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  F  P  N  G  N  T  N  Y  S  P  S  L  K  S  R  L  T  I  S  M  A  K  S  
                    Query_6279   88   TGGAGTGGATTGGGGAAATTTTTCCTAATGGAAACACCAACTACAGCCCGTCCCTCAAGAGTCGACTCACCATTTCAATGGCTAAGTCCA  177
V  86.2% (213/247)  IGHV4-4*01   137  ...................C.A..A..G...G.G...........A...................G.......A...G.A.AC.......  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  Q  V  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  T  F  A  S  H  Y  L  
                    Query_6279   178  AGAACCAGGTCTCCCTGAAACTTAACTCTGTGACGGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGACTTTCGCTTCGCACTACCTAC  267
V  86.2% (213/247)  IGHV4-4*01   227  ........T..........G..G.G.........C......................G.........-----------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                          
D  100.0% (5/5)     IGHD1-26*01  16   ---------------------------------------------------------------------------------.....----  20

                                      ---------->                              
                                      H  L  D  V  W  G  Q  G  A  T  V  S  V  S 
                    Query_6279   268  ATTTGGACGTCTGGGGCCAAGGGGCCACGGTCAGCGTCTCC  308
J  94.7% (36/38)    IGHJ6*02     22   ---....................A.........C.......  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_40147

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCCCGGCAGG	GTGGGATCTACT	TG	ACGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTC	ARHGPAGWDLLDAMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	270	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  N  F  N  S  N
                    Query_6280   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGTTCTGGATACAACTTTAACAGTAA  90
V  92.8% (270/291)  IGHV5-51*01  6    ....................................C.............A..........................G.....C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_6280   91   CTGGATCGGATGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACCAGATATAGGCC  180
V  92.8% (270/291)  IGHV5-51*01  96   .........C..................................................T.......................C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  T  A  D  K  S  T  T  T  A  Y  L  R  W  S  S  R  R  A  S  A  T  A
                    Query_6280   181  GTCCTTCCAAGGCCACGTCACCATTACAGCCGACAAGTCCACCACCACCGCCTACCTGCGGTGGAGCAGCCGGAGGGCCTCGGCCACCGC  270
V  92.8% (270/291)  IGHV5-51*01  186  ...............G........CT...............T..G..............A...........T..A........A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        T  Y  Y  C  A  R  H  G  P  A  G  W  D  L  L  D  A  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_6280   271  CACTTATTACTGTGCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  92.8% (270/291)  IGHV5-51*01  276  ..TG.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD1-26*01  7    ---------------------------------......G.....---------------------------------------------  18
J  97.9% (46/47)    IGHJ6*02     16   -----------------------------------------------...G.......................................  58

                                          
                                        S 
                    Query_6280   361  CTCA  364
J  97.9% (46/47)    IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_40146

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           313     1e-87
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGACTAG	TGGAACGAC	TCTTGTGT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGACTAGTGGAACGACTCTTGTGTACTGGTTCGACCCC	ARTSGTTLVYWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	220	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  N  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  Q  L  E 
                    Query_6281   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAATACCTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAACAACTGGAG  90
V  91.7% (220/240)  IGHV4-59*08  49   ..................A.....................G..GT...................................GGG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  T  T  Y  S  P  S  L  K  S  R  V  T  M  S  I  D  T  S  K  N 
                    Query_6281   91   TGGATTGGTTATATCTCTTACAGTGGGAGCACCACTTATAGCCCCTCCCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCCAAGAAC  180
V  91.7% (220/240)  IGHV4-59*08  139  ........G.......A.................AC..C.A...........................A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  T  S  G  T  T  L  V  Y  W 
                    Query_6281   181  CAGTTCTCCCTGAGGCTGACGTCTGTGACCGCCGCAGACACGGCCATTTATTACTGTGCGCGGACTAGTGGAACGACTCTTGTGTACTGG  270
V  91.7% (220/240)  IGHV4-59*08  229  .............A.....GC........................G.G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD1-1*01   9    --------------------------------------------------------------------.........-------------  17
J  95.8% (46/48)    IGHJ5*02     4    -------------------------------------------------------------------------------------.....  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  I  L  V  A  V  S  S  
                    Query_6281   271  TTCGACCCCTGGGGCCAGGGAATCCTGGTCGCCGTCTCCTCAG  313
J  95.8% (46/48)    IGHJ5*02     9    ......................C.......A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_40144

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           296     2e-82
IGHD2-15*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGTC	GTGGTGGCAGCAGTTACT	ACAATA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGTCGTGGTGGCAGCAGTTACTACAATATTGACTAC	ARSRGGSSYYNIDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	10	1	0	90.9
CDR1-IMGT	27	50	24	19	5	0	79.2
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	125	24	17	7	0	70.8
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	229	209	20	0	91.3


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  M  F  S  G  Y  G  M  Q  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  S  
                    Query_6282   16   GTGCAGCCTCAGGATTCATGTTCAGTGGTTACGGCATGCAGTGGGTCCGCCAGGCCCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTAGCT  105
V  91.3% (209/229)  IGHV3-30*03  65   ..........T.......CC......A.C..T........C..............T...............................TA.  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  N  D  L  S  N  D  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  D  T  L  Y  L  
                    Query_6282   106  CAAATGATTTAAGTAATGACTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGGACACGTTGTATCTGC  195
V  91.3% (209/229)  IGHV3-30*03  155  ..T.....GG.......A.A......................................................A.....C.........  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      Q  M  D  S  L  T  T  E  D  T  A  V  Y  Y  C  A  R  S  R  G  G  S  S  Y  Y  N  I  D  Y  W  
                    Query_6282   196  AAATGGACAGCCTGACAACTGAGGACACGGCTGTGTATTACTGTGCGAGGAGTCGTGGTGGCAGCAGTTACTACAATATTGACTACTGGG  285
V  91.3% (209/229)  IGHV3-30*03  245  .....A.........G.G...............................-----------------------------------------  293
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  83.3% (15/18)    IGHD2-15*01  12   ------------------------------------------------------.......T...T.C....------------------  29
J  97.6% (41/42)    IGHJ4*02     7    ------------------------------------------------------------------------------............  18

                                                                    
                                      G  Q  G  N  L  V  T  V  S  S  
                    Query_6282   286  GCCAGGGAAACCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ4*02     19   .........C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_327298

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TG	ACGATTTTTGGAGTGG	CCCCGTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACGATTTTTGGAGTGGCCCCGTCCTACTTTGACTCC	ARVTIFGVAPSYFDS	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  H  T  R  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_6283   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCACACTCGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*01  49   ....................................AT..G.A..........................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6283   91   TGGATTGGGTATATCCATTACAGTGGGAGCACCAATTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAT  180
V  95.9% (234/244)  IGHV4-59*01  139  ...............T...................C.....C...............................................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  T  I  F  G  V  A  P  S 
                    Query_6283   181  CAGTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTGACGATTTTTGGAGTGGCCCCGTCC  270
V  95.9% (234/244)  IGHV4-59*01  229  ...............C................................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (16/16)   IGHD3-3*01   6    ------------------------------------------------------------------................--------  21
J  95.7% (45/47)    IGHJ4*02     2    -----------------------------------------------------------------------------------------.  2

                                      ----------->                                  
                                       Y  F  D  S  W  A  Q  G  T  L  V  T  V  S  S  
                    Query_6283   271  TACTTTGACTCCTGGGCCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.7% (45/47)    IGHJ4*02     3    ..........A.....G.............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_327299

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           347     7e-98
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	N/A	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	N/A	N/A	GCGGGCTTTAGTTCTGT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGAGCGGGCTTTAGTTCTGTCC	TTERALVLS	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	104	10	0	91.2
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	239	17	0	93.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6284   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCACCAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.4% (239/256)  IGHV3-15*01  47   .......T..................................GT..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  I  G  R  I  K  T  K  T  D  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  I  L  S  R  D  
                    Query_6284   91   AGTGGATTGGCCGTATTAAAACCAAGACTGATGGTGAGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCATCCTCTCAAGAGATG  180
V  93.4% (239/256)  IGHV3-15*01  137  .....G...............G...A..........G......................................C.A............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  K  Y  T  V  Y  L  Q  M  N  S  L  K  M  D  D  T  A  V  Y  Y  C  T  T  E  R  A  L  V  
                    Query_6284   181  ATTCAAAATATACAGTGTATCTGCAAATGAACAGCCTGAAAATGGACGACACAGCCGTGTATTATTGTACCACAGAGCGGGCTTTAGTTC  270
V  93.4% (239/256)  IGHV3-15*01  227  ........A.C..GC...........................CC..G.................C...........--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 

                                      ---->                                  
                                      L  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6284   271  TGTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (36/36)   IGHJ5*02     16   ---....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_75242

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           343     2e-96
IGHD3-3*01                                                                                            14.1    8.7  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TGC	GGAGTGG	ACTTATG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGCGGAGTGGACTTATGGACTCC	RDCGVDLWTP	266	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	49	50	48	1	1	96
CDR1-IMGT	50	79	30	26	4	0	86.7
FR2-IMGT	80	130	51	47	4	0	92.2
CDR2-IMGT	131	151	21	14	7	0	66.7
FR3-IMGT	152	265	114	106	8	0	93
CDR3-IMGT (germline)	266	272	7	7	0	0	100
Total	N/A	N/A	273	248	24	1	90.8


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V   S  P  R  R  P  C  P  S  P  A  L  S  L  V  T  P  S  T  L  I  V  T  T  G  A  G 
                    Query_6285   1    CAGGACTGGTGA-GCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAACATTAATAGTTACTACTGGGGCTGGA  89
V  90.8% (248/273)  IGHV4-39*01  26   ............A...T.....................................G........G..G..G....................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                       S  A  S  P  R  G  T  D  W  S  G  L  G  V  S  R  T  V  V  T  P  T  T  T  R  P  S  S  V  G 
                    Query_6285   90   TCCGCCAGCCCCCGGGGAACGGACTGGAGTGGCTTGGGAGTGTCTCGAACAGTGGTAACACCTACTACAACCCGTCCCTCAAGCGTCGGG  179
V  90.8% (248/273)  IGHV4-39*01  116  .............A.....G..G.........A........A...ATT.T.....G.G.........................A....A.  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                       S  P  Y  P  *  T  R  P  I  I  S  S  P  *  G  *  A  L  *  P  P  Q  T  R  L  C  I  S  V  R 
                    Query_6285   180  TCACCGTATCCGTAGACACGTCCAATCATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTTCTGTGCGA  269
V  90.8% (248/273)  IGHV4-39*01  206  .....A...................GA.C.............A......................................A........  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      -------CDR3-IMGT--------->                                  
                                       D  C  G  V  D  L  W  T  P  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_6285   270  GACTGCGGAGTGGACTTATGGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  329
V  90.8% (248/273)  IGHV4-39*01  296  ...---------------------------------------------------------  298
                                      R                                                           
D  100.0% (7/7)     IGHD3-3*01   15   ------.......-----------------------------------------------  21
J  97.5% (39/40)    IGHJ4*02     9    --------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_327295

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         333     1e-93
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	N/A	N/A	TCACCTGCCAACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGATCACCTGCCAACCCCTACTACCACGCTCTGGACGTC	ARSPANPYYHALDV	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  V  Y  I  S  N  G  G  Y  S  W  T  W  I  R  Q  P  P  G  R  G 
                    Query_6286     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTACATCAGCAATGGTGGTTACTCCTGGACCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  92.8% (231/249)  IGHV4-30-2*01  49   ..................G............G..C........G.................G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Q  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  R  S 
                    Query_6286     91   CTGGAGTGGATTGGATACATCTATCAAAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGCGTCACCATATCGGTAGACAGGTCC  180
V  92.8% (231/249)  IGHV4-30-2*01  139  ..............G...........T...............................A......A...........A............  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  V  N  L  S  F  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  A  N  P  Y  Y 
                    Query_6286     181  AAGAACCAGTTCTCCGTTAACTTGAGTTTTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGATCACCTGCCAACCCCTACTAC  270
V  92.8% (231/249)  IGHV4-30-2*01  229  ...............C.G..GC....C.C........................G...............---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  92.7% (51/55)    IGHJ6*02       8    -----------------------------------------------------------------------------------.......  14

                                        -------------->                                 
                                         H  A  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6286     271  CACGCTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  318
J  92.7% (51/55)    IGHJ6*02       15   T...G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_327296

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           377     9e-107
IGHD3-10*01                                                                                           21.8    0.044 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGGA	CATCGA	ATTACTATGGT	AATTGGGGGGGGATTTAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGACATCGAATTACTATGGTAATTGGGGGGGGATTTATTACGGTATGGACGTC	ARTSNYYGNWGGIYYGMDV	263	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	47	4	0	92.2
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	108	6	0	94.7
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	269	255	14	0	94.8


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  N  T  K  G  M  Y  V  S  W  I  R
                    Query_6287   1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCAACACTAAGGGAATGTATGTGAGTTGGATCCG  90
V  94.8% (255/269)  IGHV2-70*01  30   ...........................................................G.....GT.......G......C........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  F  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  A  R  L  T
                    Query_6287   91   ACAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCCTTCATTGATTGGGATGATGATAAATACTACAGCACGTCTCTGAAGGCCAGGCTCAC  180
V  94.8% (255/269)  IGHV2-70*01  120  T................................AC..................................A.........A..........  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  K  D  T  S  R  N  Q  V  V  L  I  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  T
                    Query_6287   181  CATCTCCAAGGACACCTCCAGAAACCAGGTGGTCCTTATAATGACCAATATGGACCCTGTGGACACAGCCACATATTACTGTGCACGGAC  270
V  94.8% (255/269)  IGHV2-70*01  210  ....................A.................C.........C.......................G................-  298
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                      ----------------CDR3-IMGT----------------------->                                 
                                        S  N  Y  Y  G  N  W  G  G  I  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6287   271  ATCGAATTACTATGGTAATTGGGGGGGGATTTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  352
D  100.0% (11/11)   IGHD3-10*01  3    -----...........------------------------------------------------------------------  13
J  100.0% (48/48)   IGHJ6*02     15   ----------------------------------................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_327297

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           313     1e-87
IGHD5-12*01                                                                                           12.2    29   
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCC	GTGGAT	TAAGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCGTGGATTAAGCTTC	ATRGLSF	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	223	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6288   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.7% (223/246)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  D  I  T  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_6288   91   AGTGGGTCTCATCCATTAGTAGTCGTGGAGATATCACATACTACGCGGACTCAGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.7% (223/246)  IGHV3-21*01  137  .......................A..A.TAG.TA..T.........A.........A.................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  S  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  T  R  G  L  S  F  W  G  
                    Query_6288   181  AGAACTCACTGTCCCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTCTTTATTACTGTGCGACCCGTGGATTAAGCTTCTGGGGCC  270
V  90.7% (223/246)  IGHV3-21*01  227  ............AT......................C...G.........G.G.............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD5-12*01  1    ---------------------------------------------------------------------......---------------  6
J  94.3% (33/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  A  Q  V  T  V  S  S  
                    Query_6288   271  AGGGAGCCCAGGTCACCGTCTCCTCAG  297
J  94.3% (33/35)    IGHJ4*02     22   .....A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_327290

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           269     2e-74
IGHD2-21*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CGCTAT	TATTTTGGTGG	CTTTGGGCC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACGCTATTATTTTGGTGGCTTTGGGCCCTACGGGATGGACGTC	AKRYYFGGFGPYGMDV	234	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	44	24	14	1	9	58.3
FR2-IMGT	45	95	51	47	4	0	92.2
CDR2-IMGT	96	119	24	15	9	0	62.5
FR3-IMGT	120	233	114	101	13	0	88.6
CDR3-IMGT (germline)	234	239	6	6	0	0	100
Total	N/A	N/A	248	212	27	9	85.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F           S  D  A  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6289   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCA---------GCGATGCCATCAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  81
V  85.5% (212/248)  IGHV3-23*01  47   ....................................CCTTTAGCA..T.......G..C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  A  S  G  S  A  R  Y  Y  S  D  S  V  K  G  R  F  T  I  A  R  D  N  S  
                    Query_6289   82   AATGGGTCTCAGCGATTAGTGCAAGTGGAAGTGCTAGGTACTATTCAGACTCCGTGAAGGGCCGGTTCACCATCGCCAGAGACAATTCCA  171
V  85.5% (212/248)  IGHV3-23*01  137  .G...........T.......GT.....TG..AGC.CA.....CG.............................T...............  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  V  Y  L  Q  I  L  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  R  Y  Y  F  G  G  F  
                    Query_6289   172  AGAATACGGTCTATCTGCAGATATTGAGTTTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAACGCTATTATTTTGGTGGCTTTG  261
V  85.5% (212/248)  IGHV3-23*01  227  ....C...C.G........A..GAAC..CC......................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.9% (10/11)    IGHD2-21*01  5    --------------------------------------------------------------------------....G......-----  15

                                      T------------------>                                 
                                      G  P  Y  G  M  D  V  W  G  H  G  V  T  V  I  V  S  S 
                    Query_6289   262  GGCCCTACGGGATGGACGTCTGGGGCCACGGGGTCACAGTCATCGTATCCTCA  314
J  85.7% (42/49)    IGHJ6*02     14   ----......T.................A...AC...G....C...C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_327291

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           346     2e-97
IGHD3-10*01                                                                                           21.8    0.045
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TCAGCCCCGGAGATGGG	ACTCTGGTTCGGGG	CCCCGGAGATGGGACTATGGTTCGAAGAAGGGGCAG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGCCCCGGAGATGGGACTCTGGTTCGGGGCCCCGGAGATGGGACTATGGTTCGAAGAAGGGGCAGCTACGATCTGGACGTC	VSPGDGTLVRGPGDGTMVRRRGSYDLDV	243	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  C  Y  M  N  W  I  R  Q  A  P  G  K  G  L  
                    Query_6290   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTGCTACATGAACTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.5% (232/243)  IGHV3-11*01  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  G  R  S  G  R  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6290   91   AGTGGATTTCGTACATTGGTCGCAGTGGTAGAACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  95.5% (232/243)  IGHV3-11*01  137  .....G....A......A..A.T........T..........................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  S  P  G  D  G  T  L  V  
                    Query_6290   181  AGAACTCACTTTATCTGCAAATGAACAGCCTGAGAGCCGATGACACGGCCGTCTATTACTGTGTCAGCCCCGGAGATGGGACTCTGGTTC  270
V  95.5% (232/243)  IGHV3-11*01  227  ..........G.............................G...........G..........---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  92.9% (13/14)    IGHD3-10*01  6    --------------------------------------------------------------------------------...A......  15

                                      ----------CDR3-IMGT------------------------------------>                                 
                                      R  G  P  G  D  G  T  M  V  R  R  R  G  S  Y  D  L  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_6290   271  GGGGCCCCGGAGATGGGACTATGGTTCGAAGAAGGGGCAGCTACGATCTGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  359
D  92.9% (13/14)    IGHD3-10*01  16   ....-------------------------------------------------------------------------------------  19
J  93.9% (46/49)    IGHJ6*02     14   ----------------------------------------.....G.A.......................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_327293

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           402     3e-114
IGHD7-27*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGTCCTTTTA	CTAACTGGGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGTCCTTTTACTAACTGGGGTTGACTTT	AVLLLTGVDF	290	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	291	2	2	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  
                    Query_6291   3    AGGTCCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACAGCTTTACCA  92
V  94.5% (273/289)  IGHV5-51*03  2    ....G............................................................A........................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  F  I  G  W  V  R  Q  R  P  G  E  G  L  E  W  M  G  L  I  Y  P  G  D  S  D  T  R  Y  
                    Query_6291   93   ACTACTTCATCGGCTGGGTGCGCCAGAGGCCCGGGGAAGGCCTGGAGTGGATGGGGCTCATTTATCCTGGTGACTCTGATACCAGGTACA  182
V  94.5% (273/289)  IGHV5-51*03  92   G.....GG...................T.......A....................A....C.......................A....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  S  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_6291   183  ACTCGTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  94.5% (273/289)  IGHV5-51*03  182  G.C................G............................G..........C..............................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------CDR3-IMGT--------->                                  
                                      T  A  I  Y  Y  C  A  V  L  L  L  T  G  V  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6291   273  CCGCCATTTATTACTGTGCAGTCCTTTTACTAACTGGGGTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  94.5% (273/289)  IGHV5-51*03  272  .......G...........--------------------------------------------------------------  290
                                      T  A  M  Y  Y  C  A                                                              
D  100.0% (10/10)   IGHD7-27*01  1    -----------------------------..........------------------------------------------  10
J  95.2% (40/42)    IGHJ4*02     7    ---------------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_284698

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-20*01                                                                                           327     8e-92
IGHD4-17*01                                                                                           12.2    30   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-20*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGG	ACGGTG	GC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGACGGTGGCGACTTC	ARGDGGDF	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  N  F  D  D  Y  G  M  S  W  V  R  Q  V  P  G  K  G  L  
                    Query_6292   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCAACTTCGATGATTATGGCATGAGCTGGGTCCGCCAAGTTCCAGGGAAGGGTCTGG  90
V  92.0% (229/249)  IGHV3-20*01  47   .....................C..............C...T...............................C............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  K  S  G  A  T  G  Y  A  E  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_6292   91   AGTGGGTCTCTGGTATTAATTGGAAAAGTGGTGCCACAGGTTATGCAGAGTCTGTGGAGGGCCGATTCACCATTTCGAGAGACAACGCCC  180
V  92.0% (229/249)  IGHV3-20*01  137  .........................TG.....AG...............C......A................C..C............A  226
                                      E  W  V  S  G  I  N  W  N  G  G  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      Q  R  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  F  Y  R  C  A  R  G  D  G  G  D  F  W  
                    Query_6292   181  AGAGGTCCCTGTATCTGCAAATGAACAGTCTGAGAGTCGAGGATACGGCCTTCTATCGCTGTGCGAGAGGGGACGGTGGCGACTTCTGGG  270
V  92.0% (229/249)  IGHV3-20*01  227  ...AC...............................C......C........G....A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R                       
D  100.0% (6/6)     IGHD4-17*01  6    ------------------------------------------------------------------------......------------  11
J  95.0% (38/40)    IGHJ4*02     9    --------------------------------------------------------------------------------....A.....  18

                                                                    
                                      G  Q  G  T  L  V  I  V  S  S  
                    Query_6292   271  GCCAGGGAACCCTGGTCATCGTCTCCTCAG  300
J  95.0% (38/40)    IGHJ4*02     19   ..................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_284699

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAGGGAGT	AGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCC	ARAGSSGWLDS	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  D  Y  W  S  W  I  R  K  P  P  G  K  G  L  E 
                    Query_6293   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATAACTAGTGACTACTGGAGCTGGATCCGGAAGCCCCCTGGGAAGGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*01  49   .............................T........C.G....T....................C.......A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  D  Y  N  S  S  L  K  S  R  V  T  I  S  F  D  R  S  K  N 
                    Query_6293   91   TGGATTGGATATATCTATTACAGTGGGAGCACCGACTACAATTCCTCCCTCAAGAGTCGAGTCACCATATCATTTGACAGGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*01  139  ........G........................A.......CC.............................G.A....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  S  S  G  W  L  D  S 
                    Query_6293   181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCC  270
V  93.0% (227/244)  IGHV4-59*01  229  ...............C....C..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-19*01  10   ------------------------------------------------------------------------.........---------  18
J  97.5% (39/40)    IGHJ4*02     7    ----------------------------------------------------------------------------------......A.  14

                                                                      
                                       W  G  Q  G  T  L  V  T  V  S  S
                    Query_6293   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  302
J  97.5% (39/40)    IGHJ4*02     15   ................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_284696

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD2-15*01                                                                                           12.2    32   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTTCGAAGATGCGAATTCGGCG	GGATAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTTCGAAGATGCGAATTCGGCGGGATATTACTTTGACTCC	ARGFEDANSAGYYFDS	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  P  T  C  T  V  S  G  G  S  I  G  T  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6294   1    ACCCTGTCCCCCACCTGCACAGTCTCTGGTGGCTCCATCGGTACTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.0% (222/244)  IGHV4-59*01  49   ..........T.........T..................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  T  P  S  L  Q  S  L  V  S  I  S  V  D  T  S  K  N 
                    Query_6294   91   TGGATTGGGTATATCTATCACAGTGGAAGCACCTACTACACCCCGTCCCTCCAGAGTCTAGTTTCCATATCAGTAGACACGTCTAAGAAT  180
V  91.0% (222/244)  IGHV4-59*01  139  ..................T.......G......A......A...C......A......G...CA...................C.....C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  K  S  V  T  A  S  D  T  A  V  Y  Y  C  A  R  G  F  E  D  A  N  S  A  G 
                    Query_6294   181  CAGTTCTCCCTGAAGCTGAAGTCTGTGACTGCCTCGGACACGGCCGTCTATTACTGTGCGAGAGGTTTCGAAGATGCGAATTCGGCGGGA  270
V  91.0% (222/244)  IGHV4-59*01  229  ...................GC........C..TG.............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-15*01  2    ---------------------------------------------------------------------------------------...  4

                                      -------------->                                  
                                       Y  Y  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_6294   271  TATTACTTTGACTCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  319
D  100.0% (6/6)     IGHD2-15*01  5    ...----------------------------------------------  7
J  95.7% (44/46)    IGHJ4*02     3    ---..........A..............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_284697

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6295   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  98.4% (239/243)  IGHV4-59*01  49   ......................................................................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6295   91   TGGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  .........T................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_6295   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (18/20)    IGHD5-18*01  1    ----------------------------------------------------------------..........C.....T...------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6295   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_284691

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           397     8e-113
IGHD5-12*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTAAACGAAA	ATAGTGGCTACGATTA	TGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTAAACGAAAATAGTGGCTACGATTATGCTGACTAC	ARLNENSGYDYADY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	271	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  A  S  Y 
                    Query_6296   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTGCCAGCTAC  91
V  94.1% (271/288)  IGHV1-18*04  7    ............................................................................C....A........  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  F  S  T  Y  N  G  D  T  N  Y  A  Q 
                    Query_6296   92   TCTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGTCTTGAGTGGATGGGGCGGTTCAGCACTTACAATGGTGACACAAATTATGCACAG  181
V  94.1% (271/288)  IGHV1-18*04  97   GG.A...............................G..............AT..A.....G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_6296   182  AACCTCCAGGGCAGAGTCACCCTGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTTAGATCTGACGACACGGCC  271
V  94.1% (271/288)  IGHV1-18*04  187  ..G..................A.................................................G..................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                
                                       V  Y  Y  C  A  R  L  N  E  N  S  G  Y  D  Y  A  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6296   272  GTTTATTATTGTGCGAGATTAAACGAAAATAGTGGCTACGATTATGCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  357
V  94.1% (271/288)  IGHV1-18*04  277  ..G.....C.........--------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                     
D  100.0% (16/16)   IGHD5-12*01  7    ----------------------------................------------------------------------------  22
J  100.0% (39/39)   IGHJ4*02     8    -----------------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_284693

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           330     1e-92
IGHD3-10*01                                                                                           19.9    0.15 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAG	ATGGTTGGGGGAG	G	GAATA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGATGGTTGGGGGAGGGAATACTTCCAACAA	ARLDGWGREYFQQ	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	126	24	19	5	0	79.2
FR3-IMGT	127	240	114	111	3	0	97.4
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  T  T  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_6297   2    CCCTGTCCCTCACCTGCGCAGCCTCTGGATTCACCTTCACGACTTATGCAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  93.1% (228/245)  IGHV3-48*03  50   .....AGA...T....T......................GT.G.....A.........................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  Y  I  G  D  S  G  R  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  G  N  A  K  
                    Query_6297   92   GGGTTTCATACATTGGTGATAGTGGTAGAACCACATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGGCAACGCCAAGA  181
V  93.1% (228/245)  IGHV3-48*03  140  ..............A..AG.........T....T............................................A...........  229
                                      W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><--------------CDR3-IMGT-------
                                      N  S  L  Y  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  R  L  D  G  W  G  R  E  Y  
                    Query_6297   182  ACTCACTGTATCTGCAAATGAACGGCCTGAGAGCCGAGGACACGGCTGTTTATTATTGTGCGAGACTAGATGGTTGGGGGAGGGAATACT  271
V  93.1% (228/245)  IGHV3-48*03  230  .......................A...............................C.........-------------------------  294
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  92.3% (12/13)    IGHD3-10*01  9    ---------------------------------------------------------------------......C......--------  21
J  95.9% (47/49)    IGHJ1*01     4    -----------------------------------------------------------------------------------.......  10

                                      ------->                                  
                                      F  Q  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6297   272  TCCAACAATGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  313
J  95.9% (47/49)    IGHJ1*01     11   ....G..C..................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_39921

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            310     1e-86
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCTA	TATTACTATGAAAGTAGTGGTT	CAT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCTATATTACTATGAAAGTAGTGGTTCATACTTCTTTGACTAC	ARSLYYYESSGSYFFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	223	25	0	89.9


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  T  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_6298   1    GGTCCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATTAGTAGTGGTACCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGC  90
V  89.9% (223/248)  IGHV4-4*02   47   ..A.....TCC...A....CG...................C..C...A...A..............................G.......  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  S  H  S  G  S  T  K  Y  N  T  S  L  R  S  R  V  T  I  S  V  D  R  S  
                    Query_6298   91   TGGAGTGGATTGGAGAAATCTCTCATAGTGGGAGCACCAAGTACAACACGTCCCTCAGGAGTCGAGTCACCATATCAGTAGACAGGTCGA  180
V  89.9% (223/248)  IGHV4-4*02   137  .............G.......A..................C......C.........A..........................A...C.  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      N  K  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  Y  E  S  
                    Query_6298   181  ACAAGCAGTTCTCCCTGAGATTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAAGCCTATATTACTATGAAAGTA  270
V  89.9% (223/248)  IGHV4-4*02   227  .G..C.............AGC...G...........................................----------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  95.5% (21/22)    IGHD3-22*01  2    --------------------------------------------------------------------------...........T....  17

                                      GT-------------------->                                  
                                      S  G  S  Y  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6298   271  GTGGTTCATACTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.5% (21/22)    IGHD3-22*01  18   ......---------------------------------------------------  23
J  97.9% (47/48)    IGHJ4*02     1    ---------...A............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_67570

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           288     4e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACTTTGACTTC	ARVSTSAYYFDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	214	30	0	87.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_6299   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGACAACCCCCAGGAAAGGGACTGGAG  90
V  87.7% (214/244)  IGHV4-59*01  49   .................................T........A.....T.C.........A....G..G........G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  S  F  D  T  S  K  R 
                    Query_6299   91   TGGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGTCCTTTGACACGTCCAAGAGG  180
V  87.7% (214/244)  IGHV4-59*01  139  .......GGT....C...........G.G..C...C................A..G............A..AG.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  Y  Y  F  D 
                    Query_6299   181  CAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATACTACTTTGAC  270
V  87.7% (214/244)  IGHV4-59*01  229  .............A....AGC..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-2*01   17   ---------------------------------------------------------------------......---------------  22
J  91.3% (42/46)    IGHJ4*02     1    -------------------------------------------------------------------------------...........  11

                                      -->                                
                                       F  W  G  R  G  T  L  V  V  V  S  S
                    Query_6299   271  TTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  305
J  91.3% (42/46)    IGHJ4*02     12   .A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_39920

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           313     2e-87
IGHD2-8*01                                                                                            48.8    3e-10
IGHJ5*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD2-8*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	AGGA	AGGACATTGTACTAACGGTGTATGCTATACC	GAGGGTGTC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATAAGGAAGGACATTGTACTAACGGTGTATGCTATACCGAGGGTGTCTTCGACTCC	AKDKEGHCTNGVCYTEGVFDS	232	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	10	1	0	90.9
CDR1-IMGT	19	42	24	21	3	0	87.5
FR2-IMGT	43	93	51	50	1	0	98
CDR2-IMGT	94	117	24	18	6	0	75
FR3-IMGT	118	231	114	108	6	0	94.7
CDR3-IMGT (germline)	232	241	10	10	0	0	100
Total	N/A	N/A	234	217	17	0	92.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  D  N  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  L  I  
                    Query_6300   8    GTGCAGTCTCTGGATTCACCTTTGATAATTATTCTATGCACTGGGTCCGCCAAGCTCCGGGGAAGGGTCTGGAGTGGGTCTCTCTTATTA  97
V  92.7% (217/234)  IGHV3-43*01  65   ......C...................G.....A.C..............T........................................  154
                                         A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  L  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  W  N  G  G  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  K  S  L  F  L  
                    Query_6300   98   ATTGGAATGGCGGGAAGACATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCAAAAAGTCCCTGTTTCTGC  187
V  92.7% (217/234)  IGHV3-43*01  155  G....G....T..T.GC.....C...........T.........................................C.......A.....  244
                                      S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  S  L  Y  L  

                                      -------------------------------------------><--------------------------CDR3-IMGT----------
                                      Q  M  N  S  L  R  A  E  D  T  A  F  Y  Y  C  A  K  D  K  E  G  H  C  T  N  G  V  C  Y  T  
                    Query_6300   188  AAATGAACAGTCTGAGAGCTGAGGACACCGCCTTTTATTACTGTGCAAAAGATAAGGAAGGACATTGTACTAACGGTGTATGCTATACCG  277
V  92.7% (217/234)  IGHV3-43*01  245  .................A................G...................------------------------------------  298
                                      Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A  K  D                                      
D  93.5% (29/31)    IGHD2-8*01   1    ----------------------------------------------------------....T..........T...............-  31

                                      ---------------->                              
                                      E  G  V  F  D  S  W  G  Q  G  T  L  V  T  V  S 
                    Query_6300   278  AGGGTGTCTTCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCC  324
J  97.4% (38/39)    IGHJ5*01     9    --------.................A.....................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_39923

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD3-16*01                                                                                           14.1    8.5   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	261	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	20	4	0	83.3
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	20	1	0	95.2
FR3-IMGT	147	260	114	105	9	0	92.1
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	250	17	0	93.6


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  A  T  H  Y  W  S  W  I  R  
                    Query_6301   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGC  90
V  93.6% (250/267)  IGHV4-59*01  26   ................T.............................................AG..G.T.....................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  N  G  L  E  W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  
                    Query_6301   91   AGCCCCCAGGGAACGGACTGGAGTGGATTGGATATATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCA  180
V  93.6% (250/267)  IGHV4-59*01  116  .............G.................G...................G.....A............................A...  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  R  S  N  N  R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_6301   181  TATCAGTAGACAGGTCCAACAACCGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAG  270
V  93.6% (250/267)  IGHV4-59*01  206  ............C......G....AG............C...............................G.....C..........---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -CDR3-IMGT--------->                                  
                                      D  Y  D  I  G  W  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6301   271  ATTATGACATTGGCTGGAGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (7/7)     IGHD3-16*01  3    .......-----------------------------------------------  9
J  100.0% (35/35)   IGHJ4*02     14   -------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_241885

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            349     3e-98
IGHD2-15*01                                                                                           52.6    3e-11
IGHJ2*01                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-15*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACGAG	AGGATATTGTAGTGGTGGTAACTGCTACTC	TCAGGGCCCCTGGGTAAGACCTGGGGCGAAAGCCCCACTGACA	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACGAGAGGATATTGTAGTGGTGGTAACTGCTACTCTCAGGGCCCCTGGGTAAGACCTGGGGCGAAAGCCCCACTGACATGGTACTTCGATCTC	ARTRGYCSGGNCYSQGPWVRPGAKAPLTWYFDL	243	341	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6302   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGGTTTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.1% (235/247)  IGHV3-7*03   47   ..............................................C.A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  K  H  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_6302   91   AGTGGGTGGCCAATATAAAGGAAGATGGAAGTGAGAAGCACTATGTGGACTCTGTGGAGGGTCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.1% (235/247)  IGHV3-7*03   137  .............C......C................AT.................A....C............................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  I  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  T  R  G  Y  C  S  G  
                    Query_6302   181  AGAACTCACTGTATCTGCAAATAAATAGCCTGAGAGTCGAAGACACGGCCGTGTATTACTGTGCGAGGACGAGAGGATATTGTAGTGGTG  270
V  95.1% (235/247)  IGHV3-7*03   227  ......................G..C..........C...G..........................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  96.7% (29/30)    IGHD2-15*01  1    -------------------------------------------------------------------------.................  17

                                      -----------------CDR3-IMGT-------------------------------------------->                   
                                      G  N  C  Y  S  Q  G  P  W  V  R  P  G  A  K  A  P  L  T  W  Y  F  D  L  W  G  R  G  T  L  
                    Query_6302   271  GTAACTGCTACTCTCAGGGCCCCTGGGTAAGACCTGGGGCGAAAGCCCCACTGACATGGTACTTCGATCTCTGGGGCCGTGGCACCCTGG  360
D  96.7% (29/30)    IGHD2-15*01  18   ...G.........-----------------------------------------------------------------------------  30
J  100.0% (49/49)   IGHJ2*01     5    --------------------------------------------------------..................................  38

                                                     
                                      V  T  V  S  S  
                    Query_6302   361  TCACTGTCTCCTCAG  375
J  100.0% (49/49)   IGHJ2*01     39   ...............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_39922

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           433     1e-123
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  P  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_6303   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCCGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  97.9% (283/289)  IGHV5-51*03  6    ...............................................T..............................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_6303   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  97.9% (283/289)  IGHV5-51*03  96   ...................................................G............................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6303   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (283/289)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6303   271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  97.9% (283/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_24029

Length=411
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           430     1e-122
IGHD3-22*01                                                                                           37.2    1e-06 
IGHJ2*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGCCTTGAATTCAAGGT	GTATTACTATGATAGTGATGGTTAT	GAGG	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCGCCTTGAATTCAAGGTGTATTACTATGATAGTGATGGTTATGAGGGGTACTTCGATCTC	ARDRLEFKVYYYDSDGYEGYFDL	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	283	8	0	97.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_6304   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTA  90
V  97.3% (283/291)  IGHV1-46*01  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  N  P  S  G  G  T  T  S  Y  A  Q
                    Query_6304   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGGTAATCAACCCTAGTGGTGGGACCACAAGCTACGCACA  180
V  97.3% (283/291)  IGHV1-46*01  96   ...................................................AA...................T.G...............  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  T  T  S  T  V  Y  M  D  V  S  S  L  R  S  E  D  T  A
                    Query_6304   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGACCACGAGCACAGTCTACATGGACGTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  97.3% (283/291)  IGHV1-46*01  186  .....................................T......................GC............................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  Y  C  A  R  D  R  L  E  F  K  V  Y  Y  Y  D  S  D  G  Y  E  G  Y  F  D  L  W  G  R
                    Query_6304   271  CGTGTATTACTGTGCGAGAGACCGCCTTGAATTCAAGGTGTATTACTATGATAGTGATGGTTATGAGGGGTACTTCGATCTCTGGGGCCG  360
V  97.3% (283/291)  IGHV1-46*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  92.0% (23/25)    IGHD3-22*01  1    ---------------------------------------................AG.......--------------------------  25
J  100.0% (48/48)   IGHJ2*01     6    --------------------------------------------------------------------......................  27

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_6304   361  TGGCACCCTGGTCACTGTCTCCTCAG  386
J  100.0% (48/48)   IGHJ2*01     28   ..........................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40288536


Query= Query_24026

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_6305   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_6305   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_6305   181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_6305   271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_24027

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           324     7e-91
IGHD3-10*01                                                                                           14.1    8.0  
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	TCGGAGAC	CGGGGAG	N/A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCATCGGAGACCGGGGAGGATGCTTTTGATATC	ASETGEDAFDI	237	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	21	3	0	87.5
FR3-IMGT	123	236	114	110	4	0	96.5
CDR3-IMGT (germline)	237	239	3	3	0	0	100
Total	N/A	N/A	227	217	10	0	95.6


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  V  T  L  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  
                    Query_6306   13   GTGCAGCCTCTGGAGTCACCCTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGCATTA  102
V  95.6% (217/227)  IGHV3-74*01  65   ..............T.....T................................................................T....  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  S  D  G  S  R  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  
                    Query_6306   103  ACAGTGATGGGAGTAGAATAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTTC  192
V  95.6% (217/227)  IGHV3-74*01  155  .T..............C.C..G..................................................................G.  244
                                      N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------CDR3-IMGT----------->             
                                      Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  E  T  G  E  D  A  F  D  I  W  G  Q  G  
                    Query_6306   193  AAATGAACAGTCTGAGAGTCGAAGACACGGCTGTGTATTACTGTGCATCGGAGACCGGGGAGGATGCTTTTGATATCTGGGGCCAAGGGA  282
V  95.6% (217/227)  IGHV3-74*01  245  ..................C...G........................-------------------------------------------  291
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (7/7)     IGHD3-10*01  15   -------------------------------------------------------.......----------------------------  21
J  98.0% (48/49)    IGHJ3*02     2    --------------------------------------------------------------............................  29

                                                           
                                      T  M  V  T  V  S  S  
                    Query_6306   283  CAATGGTCACCGTCTCATCAG  303
J  98.0% (48/49)    IGHJ3*02     30   ................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_24024

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           288     4e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACTTTGACTTC	ARVSTSAYYFDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	214	30	0	87.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_6307   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGACAACCCCCAGGAAAGGGACTGGAG  90
V  87.7% (214/244)  IGHV4-59*01  49   .................................T........A.....T.C.........A....G..G........G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  S  F  D  T  S  K  R 
                    Query_6307   91   TGGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGTCCTTTGACACGTCCAAGAGG  180
V  87.7% (214/244)  IGHV4-59*01  139  .......GGT....C...........G.G..C...C................A..G............A..AG.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  Y  Y  F  D 
                    Query_6307   181  CAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATACTACTTTGAC  270
V  87.7% (214/244)  IGHV4-59*01  229  .............A....AGC..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-2*01   17   ---------------------------------------------------------------------......---------------  22
J  91.3% (42/46)    IGHJ4*02     1    -------------------------------------------------------------------------------...........  11

                                      -->                                
                                       F  W  G  R  G  T  L  V  V  V  S  S
                    Query_6307   271  TTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  305
J  91.3% (42/46)    IGHJ4*02     12   .A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_24025

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           308     4e-86
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGTCGTCGAGGGCACACGACATT	TATAGCAGTGGCTGG	GGGAGGCCGGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGTCGTCGAGGGCACACGACATTTATAGCAGTGGCTGGGGGAGGCCGGCTGACTAC	ARASSRAHDIYSSGWGRPADY	230	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	107	7	0	93.9
CDR3-IMGT (germline)	230	236	7	7	0	0	100
Total	N/A	N/A	223	210	13	0	94.2


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  S  H  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  F  I  S  Y  E 
                    Query_6308   14   TCTGGATTCACCTTCAGTAGCCACGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCTTTTATATCATATGAA  103
V  94.2% (210/223)  IGHV3-30*03  73   .....................T.T..................................................AG.............T  162
                                       S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  S  T  K  Y  Y  V  D  S  V  K  G  R  F  T  A  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 
                    Query_6308   104  GGAAGTACTAAATACTATGTAGACTCCGTGAAGGGCCGGTTCACCGCCTCCAGAGACAATTCCAAGAACACACTGTATCTGCAAATGAAC  193
V  94.2% (210/223)  IGHV3-30*03  163  .......A...........C..................A......AT........................G..................  252
                                       G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><--------------------------CDR3-IMGT------------------
                                       S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  A  S  S  R  A  H  D  I  Y  S  S  G  W  G  R  P 
                    Query_6308   194  AGCCTGAGAGCTGATGACACGGCTGTCTATTACTGTGCGAGAGCGTCGTCGAGGGCACACGACATTTATAGCAGTGGCTGGGGGAGGCCG  283
V  94.2% (210/223)  IGHV3-30*03  253  ..............G...........G................-----------------------------------------------  295
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  100.0% (15/15)   IGHD6-19*01  4    ------------------------------------------------------------------...............---------  18

                                      -------->                                  
                                       A  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_6308   284  GCTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  326
J  97.6% (40/41)    IGHJ4*02     8    --..............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_24022

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           433     1e-123
IGHD1-26*01                                                                                           10.3    139   
IGHJ6*02                                                                                              108     9e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AACCTCAGTCCCCTC	TGGGA	AAG	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACCTCAGTCCCCTCTGGGAAAGATTACTACTACTACTACGGTTTGGACGTC	ATSVPSGKDYYYYYGLDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	281	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  N  F  T  S  Y
                    Query_6309   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAACTTTACCAGCTA  90
V  98.6% (281/285)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_6309   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGCATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.6% (281/285)  IGHV5-51*03  96   ...................................................G......................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_6309   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  98.6% (281/285)  IGHV5-51*03  186  .........................................................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        L  Y  Y  C  A  T  S  V  P  S  G  K  D  Y  Y  Y  Y  Y  G  L  D  V  W  G  P  G  T  T  V  T
                    Query_6309   271  CCTGTATTACTGTGCAACCTCAGTCCCCTCTGGGAAAGATTACTACTACTACTACGGTTTGGACGTCTGGGGCCCAGGGACCACGGTCAC  360
V  98.6% (281/285)  IGHV5-51*03  276  .A.............---------------------------------------------------------------------------  290
                                        M  Y  Y  C  A                                                                           
D  100.0% (5/5)     IGHD1-26*01  8    ------------------------------.....-------------------------------------------------------  12
J  96.8% (60/62)    IGHJ6*02     1    --------------------------------------....................A...............A...............  52

                                                
                                        V  S  S 
                    Query_6309   361  CGTCTCCTCA  370
J  96.8% (60/62)    IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_24023

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           263     2e-72
IGHD2-15*01                                                                                           12.2    32   
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TGGTGG	CGGACGGGGGCTCGATTGGGGTGCGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTGGCGGACGGGGGCTCGATTGGGGTGCGGTGGTTCGACACC	ARLVADGGSIGVRWFDT	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	96	18	0	84.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	206	38	0	84.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  I  R  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  T  L  E 
                    Query_6310   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGCCTCCATTAGAAGTTATTACTGGAGTTGGGTTCGCCAGCCCCCCGGCAAGACACTGGAG  90
V  84.4% (206/244)  IGHV4-59*08  49   ...................C...........G......C..T.....C........C...A.C..G........A..G...GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  F  H  T  G  T  T  N  Y  H  P  S  L  K  S  R  V  T  I  S  S  D  T  S  K  N 
                    Query_6310   91   TGGATTGGCTATTTCTTTCACACCGGGACCACCAATTACCATCCCTCCCTCAAGAGTCGAGTCACCATTTCATCAGACACGTCCAAGAAC  180
V  84.4% (206/244)  IGHV4-59*08  139  ........G...A...A.T...GT....G......C...A.C..........................A...GT................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       I  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  V  A  D  G  G  S  I  G 
                    Query_6310   181  ATCTTCTCATTGACTCTGACGTCTGTGACCGCCGCAGACACGGCCGTCTATTTTTGTGCGAGACTGGTGGCGGACGGGGGCTCGATTGGG  270
V  84.4% (206/244)  IGHV4-59*08  229  CAG.....CC...AG....GC..........................G....AC..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-15*01  13   ----------------------------------------------------------------......--------------------  18

                                      ----------------->                                  
                                       V  R  W  F  D  T  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_6310   271  GTGCGGTGGTTCGACACCTGGGGCCAGGGAACGCTGGTCAGCGTCTCATCAG  322
J  91.3% (42/46)    IGHJ5*02     6    ------.........C................C.......C......C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_24020

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD1-1*01                                                                                            18.0    0.59 
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCCTACCGGCCGTG	GGTACAACT	TTGGGAAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCCTACCGGCCGTGGGTACAACTTTGGGAATAACTGGTTCGACCCG	AREPTGRGYNFGNNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  H  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6311   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGTCATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   ...............................G..........AG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  K  G  G  I  T  N  H  N  P  S  L  K  S  R  I  T  I  S  L  D  T  S  K  N 
                    Query_6311   91   TGGATTGGATATGTCTATAAGGGCGGGATCACCAACCACAACCCCTCCCTCAAGAGTCGAATCACCATATCACTAGACACGTCCAAGAAC  180
V  92.2% (226/245)  IGHV4-59*01  139  ........G...A.....T.CA.T....G.......T.......................G...........G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  T  L  S  P  L  T  A  A  D  T  A  M  Y  H  C  A  R  E  P  T  G  R  G  Y  N  F 
                    Query_6311   181  CAGTTCTCCCTGACGCTGAGCCCTCTGACCGCTGCTGACACGGCCATGTATCACTGTGCGAGAGAGCCTACCGGCCGTGGGTACAACTTT  270
V  92.2% (226/245)  IGHV4-59*01  229  .............A.......T..G..........G.........G.....T.............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD1-1*01   1    -------------------------------------------------------------------------------.........--  9

                                      -------------------->                                  
                                       G  N  N  W  F  D  P  W  G  P  G  T  L  V  T  V  S  S  
                    Query_6311   271  GGGAATAACTGGTTCGACCCGTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  325
J  95.9% (47/49)    IGHJ5*02     3    ------..............C.......A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_24021

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD3-16*01                                                                                           14.1    8.7  
IGHJ1*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GATGGCGGGTTCTATGAAGTTGG	TGCTTAT	TCTCCAC	AATAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGATGGCGGGTTCTATGAAGTTGGTGCTTATTCTCCACAATACTTCCACCAC	ADGGFYEVGAYSPQYFHH	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	30	30	29	1	0	96.7
CDR1-IMGT	31	54	24	21	3	0	87.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	129	24	17	7	0	70.8
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	228	18	0	92.7


Alignments

                                      <----------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT-------
                                       G  S  L  R  L  S  C  A  G  S  G  F  T  F  T  R  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L 
                    Query_6312   1    GGGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTTACCAGATATGGCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGACTG  90
V  92.7% (228/246)  IGHV3-23*01  46   .........................C.................G...C....C......C..........................G...  135
                                       G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L 

                                      --------------><-------CDR2-IMGT------><--------------------------------------------------
                                       E  W  V  S  G  I  T  T  S  G  D  I  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S 
                    Query_6312   91   GAGTGGGTCTCAGGTATTACTACTAGTGGTGACATTACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCC  180
V  92.7% (228/246)  IGHV3-23*01  136  .............C.....G.GG........GT.GC......................................................  225
                                       E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  S  A  I  Y  Y  C  A  D  G  G  F  Y  E  V  G 
                    Query_6312   181  AAGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACTCGGCCATATATTACTGTGCGGATGGCGGGTTCTATGAAGTTGGT  270
V  92.7% (228/246)  IGHV3-23*01  226  .........C...............................G...A.....G..............------------------------  291
                                       K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-16*01  28   -----------------------------------------------------------------------------------------.  28

                                      -IMGT--------------------->                                  
                                       A  Y  S  P  Q  Y  F  H  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6312   271  GCTTATTCTCCACAATACTTCCACCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  331
D  100.0% (7/7)     IGHD3-16*01  29   ......-------------------------------------------------------  34
J  97.9% (47/48)    IGHJ1*01     5    -------------..........G.....................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_176984

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           310     1e-86
IGHD3-22*01                                                                                           12.2    31   
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGGGCACTG	GGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGATGGGGCACTGGGTTATTACTATGGTATCGACGTC	VRDGALGYYYGIDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  E  M  S  W  V  R  L  S  P  G  M  G  L  
                    Query_6313   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACTTATGAAATGAGCTGGGTCCGCCTGTCTCCAGGAATGGGGCTGG  90
V  89.6% (224/250)  IGHV3-48*03  47   .............................................G...........A...........A.G.......G.A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  N  I  G  S  S  G  A  P  K  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  A  
                    Query_6313   91   AGTGGGTTTCAAACATTGGGAGTAGTGGTGCTCCCAAAAAGTACGCAGACTCTGTGAAGGGCCGATTCACCATTTCCAGAGACATTGCCA  180
V  89.6% (224/250)  IGHV3-48*03  137  ...........T.....A.T.........AG.A...T.T.C................................C..........AC....  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  V  R  D  G  A  L  G  Y  Y  
                    Query_6313   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCCTTGTATCACTGTGTGCGAGATGGGGCACTGGGTTATTACT  270
V  89.6% (224/250)  IGHV3-48*03  227  .......A....................C....................TG.T...T......C.A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-22*01  20   --------------------------------------------------------------------------------......----  25
J  94.1% (48/51)    IGHJ6*02     12   --------------------------------------------------------------------------------------....  15

                                      ------------->                                 
                                      Y  G  I  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_6313   271  ATGGTATCGACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  317
J  94.1% (48/51)    IGHJ6*02     16   .C.....G.............A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_176985

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            341     5e-96
IGHD4-17*01                                                                                           25.7    0.003
IGHJ6*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	N/A	CTACGGTGACTAC	AGT	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACTACGGTGACTACAGTTACGACTATTACGGTATGGACGTC	ARDYGDYSYDYYGMDV	242	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	28	25	24	1	0	96
CDR1-IMGT	29	52	24	21	3	0	87.5
FR2-IMGT	53	103	51	48	3	0	94.1
CDR2-IMGT	104	127	24	23	1	0	95.8
FR3-IMGT	128	241	114	109	5	0	95.6
CDR3-IMGT (germline)	242	249	8	7	1	0	87.5
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        P  R  L  S  C  A  A  S  G  F  I  F  N  N  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W
                    Query_6314   4    CCCGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAATAACTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTG  93
V  94.3% (232/246)  IGHV3-7*01   51   ..T.............................C.....G..G............C...................................  140
                                        L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W

                                      ---------><-------CDR2-IMGT------><----------------------------------------------------FR3
                                        V  A  T  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  E  G  R  F  T  I  P  R  D  N  A  K  N
                    Query_6314   94   GGTGGCTACCATAAAGCAAGATGGAAGTGAGAAGTACTATGTGGACTCTGTGGAGGGCCGCTTCACCATCCCCAGGGACAACGCCAAGAA  183
V  94.3% (232/246)  IGHV3-7*01   141  ......C.A........................A..................A.......A.........T....A..............  230
                                        V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N

                                      -IMGT----------------------------------------------------><-------------------CDR3-IMGT---
                                        S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  G  D  Y  S  Y  D  Y
                    Query_6314   184  CTCACTGTATCTCCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGGACTACGGTGACTACAGTTACGACTA  273
V  94.3% (232/246)  IGHV3-7*01   231  ............G..................................................A..------------------------  296
                                        S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                           
D  100.0% (13/13)   IGHD4-17*01  4    ------------------------------------------------------------------.............-----------  16
J  96.5% (55/57)    IGHJ6*02     6    ----------------------------------------------------------------------------------...T....  13

                                      --------------->                                 
                                        Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6314   274  TTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  322
J  96.5% (55/57)    IGHJ6*02     14   C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_335208

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           294     6e-82
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTGG	AGCAGTGGCTGGT	CGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTGGAGCAGTGGCTGGTCGGTTTGACTTC	AREGGAVAGRFDF	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  R  G  S  V  S  S  G  G  Y  H  W  S  W  I  R  Q  T  P  G  R  G  
                    Query_6315   4    CCCTGAGACTCTCCTGCTCTGTCTCTCGTGGCTCCGTCAGCAGTGGGGGTTATCACTGGTCCTGGATCCGGCAGACCCCAGGCAGGGGAC  93
V  87.6% (219/250)  IGHV4-61*08  50   .....TCC...A.....A........G...................T.....CT.....AG.............C.......G.A.....  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  H  F  T  G  T  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  A  D  M  S  
                    Query_6315   94   TGGAGTGGATTGGCTATATCCACTTCACTGGGACCACCAAGTACAACCCCTCCCTTAAGAGTCGAGTCAGCATATCAGCAGACATGTCCA  183
V  87.6% (219/250)  IGHV4-61*08  140  .............G......T.T.A..G.....G......C..............C.............C........T.....C.....  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  A  V  A  G  
                    Query_6315   184  AGAACCAATTCTCCCTGAACCTGAGGTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTGCGAGAGAGGGTGGAGCAGTGGCTGGTC  273
V  87.6% (219/250)  IGHV4-61*08  230  .......G...........G.....C..........................G..T..C...........--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD6-19*01  7    ----------------------------------------------------------------------------.............-  19

                                      ---------->                                  
                                      R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6315   274  GGTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (42/43)    IGHJ4*02     6    --.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_4118

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         288     5e-80
IGHD3-22*01                                                                                           14.1    8.4  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCATATGCCTACGAAGACAGAAA	TTATTAC	N/A	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATTCATATGCCTACGAAGACAGAAATTATTACTTCGACCCC	ARDSYAYEDRNYYFDP	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	12	9	0	57.1
FR3-IMGT	127	240	114	98	16	0	86
CDR3-IMGT (germline)	241	248	8	7	1	0	87.5
Total	N/A	N/A	248	216	32	0	87.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  S  V  S  G  Y  S  I  N  S  G  Y  Y  W  A  W  I  R  Q  S  P  G  K  G  L 
                    Query_6316     1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTTACTCCATAAACAGTGGTTACTACTGGGCCTGGATCCGCCAGTCCCCAGGGAAGGGGCTG  90
V  87.1% (216/248)  IGHV4-38-2*02  49   ..................A...................C.G.................G.........G...C.................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  V  Y  R  T  G  N  M  Y  Y  S  P  S  F  E  S  R  V  T  L  L  V  D  K  A  K 
                    Query_6316     91   GAGTGGATTGGGAGTGTCTATCGTACCGGTAATATGTACTACAGTCCGTCCTTCGAGAGTCGAGTCACTCTATTAGTAGACAAGGCGAAG  180
V  87.1% (216/248)  IGHV4-38-2*02  139  ...............A......A..GT..G.GC.CC.......AC......C..A.............CA...C........C.T.C...  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                         N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  Y  A  Y  E  D  R 
                    Query_6316     181  AACCAGTTCTCGTTGAGGTTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGCGAGATTCATATGCCTACGAAGACAGA  270
V  87.1% (216/248)  IGHV4-38-2*02  229  ...........CC...A.C...G.................................C......A....----------------------  296
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         

                                        ----------------->                                  
                                         N  Y  Y  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6316     271  AATTATTACTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (7/7)     IGHD3-22*01    22   --.......-------------------------------------------  28
J  100.0% (43/43)   IGHJ5*02       9    ---------...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_25379

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           363     2e-102
IGHD3-10*01                                                                                           14.1    8.8   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TACCTGG	ATTACTA	AAGT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATACCTGGATTACTAAAGTCTTTGACTAC	ARHTWITKVFDY	267	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	152	21	18	3	0	85.7
FR3-IMGT	153	266	114	102	12	0	89.5
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	253	21	0	92.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  A  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  N  Y  F  W  G  W  
                    Query_6317   1    CAGGACTGGTGAAGCCCTCGGAGGCCCTGTCCCTCACTTGTACTGTCTCTGGTGGCTCCATCAGCAGTAGTAATTACTTCTGGGGCTGGA  90
V  92.3% (253/274)  IGHV4-39*01  26   ................T......A.............C..C...............................G.....A...........  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  V  Y  F  S  G  R  T  H  Y  N  P  S  L  K  S  R  
                    Query_6317   91   TCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTGTCTATTTTAGTGGGAGAACCCACTACAACCCGTCCCTGAAGAGTCGAA  180
V  92.3% (253/274)  IGHV4-39*01  116  .........................................A......A.........C...T................C.........G  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      I  T  I  S  V  D  T  S  R  M  Q  F  S  L  K  V  S  A  V  T  A  A  D  T  A  V  Y  F  C  A  
                    Query_6317   181  TCACCATATCAGTAGACACGTCGAGGATGCAGTTCTCCCTCAAGGTGAGCGCTGTGACCGCCGCAGACACGGCTGTGTATTTCTGTGCGA  270
V  92.3% (253/274)  IGHV4-39*01  206  ..........C...........C.A..AC...........G...C.....T..............................A........  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------CDR3-IMGT------------>                                  
                                      R  H  T  W  I  T  K  V  F  D  Y  W  G  Q  G  A  Q  V  T  V  S  S  
                    Query_6317   271  GACATACCTGGATTACTAAAGTCTTTGACTACTGGGGCCAGGGAGCCCAGGTCACCGTCTCGTCAG  336
V  92.3% (253/274)  IGHV4-39*01  296  ....--------------------------------------------------------------  299
                                      R                                                                 
D  100.0% (7/7)     IGHD3-10*01  3    -----------.......------------------------------------------------  9
J  93.2% (41/44)    IGHJ4*02     5    ----------------------......................A...T............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_25378

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           308     4e-86
IGHD1-26*01                                                                                           18.0    0.58 
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGATACAACGAAA	TATACTGGGACCTAC	GATGGG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGATACAACGAAATATACTGGGACCTACGATGGGTTCGATCTC	ARDDTTKYTGTYDGFDL	235	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	120	21	15	3	3	71.4
FR3-IMGT	121	234	114	106	8	0	93
CDR3-IMGT (germline)	235	242	8	8	0	0	100
Total	N/A	N/A	245	223	19	3	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  L  S  G  V  S  I  S  G  Y  Y  W  H  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6318   1    ACCCTGTCCCTCACCTGCTCTCTCTCTGGTGTCTCCATCAGTGGTTACTACTGGCACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.0% (223/245)  IGHV4-59*01  49   ..................A..G.........G..........A...........AG..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N     S  G  G  T  K  Y  S  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6318   91   TGGATCGGCTATATCAAT---AGCGGGGGCACCAAGTACAGTCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  177
V  91.0% (223/245)  IGHV4-59*01  139  .....T..G......T..TAC..T...A.......C....AC..........A.....................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  F  Y  Y  C  A  R  D  D  T  T  K  Y  T  G  T 
                    Query_6318   178  CAGTTCTCCCTGAAACTGACCTCTGTGACCGCTGCGGACACGGCCTTTTATTACTGTGCGAGAGACGATACAACGAAATATACTGGGACC  267
V  91.0% (223/245)  IGHV4-59*01  229  ..............G....G.........................G.G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  86.7% (13/15)    IGHD1-26*01  3    ------------------------------------------------------------------------------....G.....G.  14

                                      ----------------->                                  
                                       Y  D  G  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6318   268  TACGATGGGTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  319
D  86.7% (13/15)    IGHD1-26*01  15   ...-------------------------------------------------  17
J  100.0% (43/43)   IGHJ2*01     11   ---------...........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_176982

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           262     4e-72
IGHD2-15*01                                                                                           10.3    120  
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	ACATAATCCT	GCTGC	CAGAGGGGC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGACATAATCCTGCTGCCAGAGGGGCCAACTGGTTCGACCTC	ARGHNPAARGANWFDL	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	48	24	19	2	3	79.2
FR2-IMGT	49	99	51	45	6	0	88.2
CDR2-IMGT	100	120	21	18	3	0	85.7
FR3-IMGT	121	234	114	95	19	0	83.3
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	245	208	34	3	84.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  D  F  Y  G  G  S  F     D  S  Y  W  N  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_6319   1    ACCCTGTCCCTCACCTGCGATTTTTATGGTGGGTCCTT---TGATTCCTACTGGAATTGGATCCGCCAGACTCCAGGGAAGGGGCTGGAG  87
V  84.9% (208/245)  IGHV4-34*01  49   ...................C.G.C..............CAG..G..A........GC............C.C..................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  N  R  A  G  S  T  N  F  N  P  S  L  E  S  R  L  T  I  S  V  D  T  S  T  K 
                    Query_6319   88   TGGATTGCAGAAATCAATCGTGCTGGAAGCACCAACTTCAATCCGTCCCTCGAGAGTCGACTCACCATTTCAGTGGACACGTCCACGAAG  177
V  84.9% (208/245)  IGHV4-34*01  139  .......GG..........A.AG..............A...C.........A........G.......A.....A..........A...C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       R  F  S  L  R  L  N  S  L  N  A  A  D  T  G  V  Y  Y  C  A  R  G  H  N  P  A  A  R  G  A 
                    Query_6319   178  CGATTCTCCCTGAGGCTAAATTCTCTTAACGCCGCAGACACGGGTGTGTATTACTGTGCGCGAGGACATAATCCTGCTGCCAGAGGGGCC  267
V  84.9% (208/245)  IGHV4-34*01  229  .AG..........A...G.GC...G.G.C......G.......C................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (5/5)     IGHD2-15*01  21   ---------------------------------------------------------------------------.....----------  25
J  96.0% (48/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  D  L  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_6319   268  AACTGGTTCGACCTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  316
J  96.0% (48/50)    IGHJ5*02     3    .............C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_176983

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     6e-104
IGHD7-27*01                                                                                           14.1    8.3   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCA	AACTGGG	AACTCAATAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGACGTCAAACTGGGAACTCAATATACAACTGGTTCGACCCC	SRRQTGNSIYNWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6320   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (239/243)  IGHV4-59*01  49   .......................................................G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6320   91   TGGATTGGATATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  ........G.................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  R  R  Q  T  G  N  S  I  Y  N 
                    Query_6320   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTTCGAGACGTCAAACTGGGAACTCAATATACAAC  270
V  98.4% (239/243)  IGHV4-59*01  229  .............A...........................................G.....---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD7-27*01  3    --------------------------------------------------------------------.......---------------  9
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------------.....  5

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6320   271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (51/51)   IGHJ5*02     6    ..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_4113

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           333     1e-93
IGHD3-22*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GAAGTACCTGAGGGGAAAT	TATGACAGTCGTGG	CCGACATACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGGAAGTACCTGAGGGGAAATTATGACAGTCGTGGCCGACATACCCCCTTTGAGTAC	GRKYLRGNYDSRGRHTPFEY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6321   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACCTTCAGTAATTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (230/247)  IGHV3-48*03  47   ............................T................G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  Y  I  S  A  S  G  S  T  I  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_6321   91   AGTGGGTTGCATACATTAGTGCTAGTGGTAGCACCATATACTACGCAGACTCTGTGGAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  93.1% (230/247)  IGHV3-48*03  137  ........T...........AG.........T........................A......................A..........  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  E  L  Q  M  N  G  L  R  I  E  D  T  A  V  Y  Y  C  G  R  K  Y  L  R  G  N  Y  
                    Query_6321   181  AGAACTCACTGGAGCTGCAAATGAACGGCCTGAGAATCGAGGACACGGCCGTGTATTACTGTGGGAGGAAGTACCTGAGGGGAAATTATG  270
V  93.1% (230/247)  IGHV3-48*03  227  ...........T.T............A........GC............T..T..........C...-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  85.7% (12/14)    IGHD3-22*01  8    --------------------------------------------------------------------------------------....  11

                                      R3-IMGT------------------------>                                  
                                      D  S  R  G  R  H  T  P  F  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6321   271  ACAGTCGTGGCCGACATACCCCCTTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  85.7% (12/14)    IGHD3-22*01  12   .T...A....--------------------------------------------------------  21
J  97.7% (43/44)    IGHJ4*02     5    ----------------------......C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_25374

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     4e-93
IGHD3-22*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TCTCC	TATTGCTATGA	GCGGGACTCGGTTTTCGAGTCGGGCTCCCCTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATCTCCTATTGCTATGAGCGGGACTCGGTTTTCGAGTCGGGCTCCCCTCGACTAC	AKSPIAMSGTRFSSRAPLDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6322   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAACTATGCCCTGAGTTGGGTCCGACAGGCTCCAGGGAAGGGGCTGC  90
V  92.7% (230/248)  IGHV3-23*01  47   .............................................G.......A....C........C.....................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  T  I  S  G  S  G  R  G  T  S  T  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6322   91   AGTGGGTCTCAACTATTAGTGGTAGTGGTCGTGGTACCTCCACCGCAGACTCCGTGAAGGGCCGGTTTACCATCTCCAGAGACAATTCCA  180
V  92.7% (230/248)  IGHV3-23*01  137  ...........G.................G..A.C..A.A.TA........................C......................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  S  P  I  A  M  S  G  
                    Query_6322   181  AGAACACGCTGTATCTGCAACTGAACAGCCTGAGAGCCGACGACACGGCCGTATACTATTGTGCGAAATCTCCTATTGCTATGAGCGGGA  270
V  92.7% (230/248)  IGHV3-23*01  227  ....................A...................G..............T..C.........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.9% (10/11)    IGHD3-22*01  2    -------------------------------------------------------------------------....A......------  12

                                      R3-IMGT------------------------>                                  
                                      T  R  F  S  S  R  A  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6322   271  CTCGGTTTTCGAGTCGGGCTCCCCTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
J  100.0% (40/40)   IGHJ4*02     9    --------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_25377

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           358     4e-101
IGHD3-3*01                                                                                            14.1    8.6   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGCGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  S  S  G  T  Y  D  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_6323   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTCAGCAGTGGTACTTACGACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.0% (239/249)  IGHV4-39*01  49   ....................................A........A...G....T...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  F  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  F  V  D  T  S 
                    Query_6323   91   CTGGAGTGGATTGGGACTTTTTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATTCGTAGACACGTCC  180
V  96.0% (239/249)  IGHV4-39*01  139  ................G.A.C.....................................A.................C.............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  R  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I 
                    Query_6323   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACAGGGCTGTGTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATT  270
V  96.0% (239/249)  IGHV4-39*01  229  ..............................................C......................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------------...  11

                                      GT------------------>                                  
                                       F  V  A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6323   271  TTTGTCGCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  100.0% (7/7)     IGHD3-3*01   12   ....---------------------------------------------------  15
J  100.0% (43/43)   IGHJ4*02     6    ------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_25376

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           338     4e-95
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	CCGGTAGCCT	TGGCTGGT	G	TTGCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CCGGTAGCCTTGGCTGGTGTTGCCTGC	PVALAGVAC	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	107	7	0	93.9
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_6324   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCCATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  93.5% (232/248)  IGHV3-73*01  47   .........A..........................................T.....................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  G  G  S  V  R  S  K  A  K  S  Y  A  T  A  Y  A  A  S  V  K  V  R  F  T  I  S  R  D  
                    Query_6324   91   AGTGGGGGGGAAGTGTTAGAAGCAAAGCTAAGAGTTACGCGACGGCATATGCTGCGTCGGTGAAAGTCAGGTTCACCATCTCTAGAGATG  180
V  93.5% (232/248)  IGHV3-73*01  137  ......TT..CC..A................C...........A......................G...............C.......  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  K  N  M  T  Y  M  Q  M  N  S  L  R  T  E  D  T  A  V  Y  Y  C  P  V  A  L  A  G  V  
                    Query_6324   181  ATTCAAAGAACATGACGTATATGCAAATGAACAGCCTGAGAACCGAGGACACGGCCGTCTATTACTGTCCGGTAGCCTTGGCTGGTGTTG  270
V  93.5% (232/248)  IGHV3-73*01  227  ............C.G.....C..................A..................G.........----------------------  294
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  100.0% (8/8)     IGHD6-19*01  12   ------------------------------------------------------------------------------........----  19
J  92.9% (39/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      A  C  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_6324   271  CCTGCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  309
J  92.9% (39/42)    IGHJ4*02     10   A..A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_25371

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD2-2*02                                                                                            10.3    142   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCTAAAACAGGCCCAGAA	ATACC	CGACCCCCG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCTAAAACAGGCCCAGAAATACCCGACCCCCGACTTCGGTATGGACGTC	ARPLKQAQKYPTPDFGMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	72	2	0	97.3
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	112	2	0	98.2
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	284	9	0	96.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_6325   4    AGATGCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  93
V  96.9% (284/293)  IGHV5-51*03  2    ..G.........................G.............................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  R  L  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_6325   94   ATTACTGGATCGCCTGGGTGCGCCGGCTGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  183
V  96.9% (284/293)  IGHV5-51*03  92   GC..........G...........A.A...............................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  H  W  S  S  L  K  A  S  D  
                    Query_6325   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGCACCGCCTACCTGCACTGGAGCAGCCTGAAGGCCTCGGACA  273
V  96.9% (284/293)  IGHV5-51*03  182  .......................................A........................G.........................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  M  Y  Y  C  A  R  P  L  K  Q  A  Q  K  Y  P  T  P  D  F  G  M  D  V  W  G  Q  G  T  
                    Query_6325   274  CCGCCATGTATTACTGTGCGAGACCTCTAAAACAGGCCCAGAAATACCCGACCCCCGACTTCGGTATGGACGTCTGGGGCCAAGGGACCG  363
V  96.9% (284/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (5/5)     IGHD2-2*02   27   -------------------------------------------.....------------------------------------------  31
J  96.0% (48/50)    IGHJ6*02     13   ---------------------------------------------------------...A............................A  45

                                                       
                                      A  V  T  V  S  S 
                    Query_6325   364  CGGTCACCGTCTCCTCA  380
J  96.0% (48/50)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_176989

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           402     3e-114
IGHD2-21*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	ATTTTGGTGG	ATAGAGATAGAGTTCC	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTC	ARGGFWWIEIEFRMDV	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	104	10	0	91.2
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	295	276	19	0	93.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_6326   4    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACC  93
V  93.6% (276/295)  IGHV1-18*01  1    .....T.....G.......................................................................C......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  W  I  S  A  Y  T  G  N  T  K  N 
                    Query_6326   94   GACTATGGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGATGGATCAGCGCTTACACTGGTAATACAAAAAAT  183
V  93.6% (276/295)  IGHV1-18*01  91   AG...........G.....................................A.....................A......C.....CT..  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  V  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  D  G 
                    Query_6326   184  GCACAAAAAGTCCAGGGCAGAGTGACCATGACCACAGACACATCCACGAGAACAGCTTACATGGAGTTGAGGAGCCTGAGATCTGACGGC  273
V  93.6% (276/295)  IGHV1-18*01  181  .....G..GC.............C..........................C.....C.........C.....................A.  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  G  G  F  W  W  I  E  I  E  F  R  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_6326   274  ACGGCCGTGTATTACTGTGCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTCTGGGGCCAAGGGACCACGGTCACC  363
V  93.6% (276/295)  IGHV1-18*01  271  .........................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  90.0% (9/10)     IGHD2-21*01  6    -----------------------------...G......---------------------------------------------------  15
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------------...................................  53

                                               
                                       V  S  S 
                    Query_6326   364  GTCTCCTCA  372
J  100.0% (44/44)   IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_25373

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           380     1e-107
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CGGGTTATAGCGGAAGA	AGCAGCAGCT	CTTATA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCGGGTTATAGCGGAAGAAGCAGCAGCTCTTATAAC	AKAGYSGRSSSSYN	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	246	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6327   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.8% (246/249)  IGHV3-30*18  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  L  Y  D  G  S  D  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6327   91   AGTGGGTGGCAGTTATATTATATGATGGAAGTGATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  98.8% (246/249)  IGHV3-30*18  137  ..................C.............A.........................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  V  Y  Y  C  A  K  A  G  Y  S  G  R  S  
                    Query_6327   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAACTGAGGACACGGCTGTGTATTACTGTGCGAAAGCGGGTTATAGCGGAAGAAGCA  270
V  98.8% (246/249)  IGHV3-30*18  227  ...................................G.................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD6-13*01  7    --------------------------------------------------------------------------------------....  10

                                      ------------->                                  
                                      S  S  S  Y  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6327   271  GCAGCTCTTATAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (10/10)   IGHD6-13*01  11   ......------------------------------------------  16
J  100.0% (36/36)   IGHJ4*02     13   ------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_25372

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         388     4e-110
IGHJ3*02                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ATGGGCGCAGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGCGCAGATGATGCTTTTGATATC	ARMGADDAFDI	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	248	0	0	100


Alignments

                                         <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                            S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                     Query_6328     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  100.0% (248/248)  IGHV3-30-3*01  47   ..........................................................................................  136
                                            S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                         -------------><-------CDR2-IMGT------><---------------------------------------------------
                                         E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                     Query_6328     91   AGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  100.0% (248/248)  IGHV3-30-3*01  137  ..........................................................................................  226
                                         E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                         -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                         K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  M  G  A  D  D  A  F  
                     Query_6328     181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAATGGGCGCAGATGATGCTTTTG  270
V  100.0% (248/248)  IGHV3-30-3*01  227  ....................................................................----------------------  294
                                         K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (50/50)    IGHJ3*02       1    -------------------------------------------------------------------------------...........  11

                                         ---->                                  
                                         D  I  W  G  Q  G  T  M  V  T  V  S  S  
                     Query_6328     271  ATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  309
J  100.0% (50/50)    IGHJ3*02       12   .......................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_60816

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         360     1e-101
IGHD3-10*01                                                                                           10.3    115   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GA	GGGGA	CAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAGGGGACATTATGGACGTC	ARGGDIMDV	244	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_6329     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  H  S  G  L  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  R  S 
                    Query_6329     91   CTGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACAGGTCC  180
V  96.0% (240/250)  IGHV4-30-2*01  139  ..............G......T...........AG..C.T...A......................G.......................  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                         K  N  Q  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  D  I  M  D  V 
                    Query_6329     181  AAGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAGGGGACATTATGGACGTC  270
V  96.0% (240/250)  IGHV4-30-2*01  229  ...........C.......A..................................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01    16   ------------------------------------------------------------------------.....-------------  20
J  100.0% (43/43)   IGHJ6*02       20   --------------------------------------------------------------------------------..........  29

                                                                         
                                         W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6329     271  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  303
J  100.0% (43/43)   IGHJ6*02       30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_60814

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6330   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_6330   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_6330   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  98.0% (50/51)    IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_6330   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  310
J  98.0% (50/51)    IGHJ5*02     12   .................................T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_60812

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_6331  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01  49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_6331  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01  139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_6331  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01  229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01  13   ----------------------------------------------------------------------.....C..G...--------  24

                                     ----------->                                  
                                      G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_6331  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02    6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_60811

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           282     4e-78
IGHD3-16*02                                                                                           12.2    33   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GATCTCC	TATTGTTAT	GAGCGGGACACGGTTTTCGAGTCGGGCTCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTCCTATTGTTATGAGCGGGACACGGTTTTCGAGTCGGGCTCCCCTTGACCAC	ARSPIVMSGTRFSSRAPLDH	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	213	33	0	86.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  K  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6332   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACCTTCACCAAACATGCCCTGAGTTGGGTCCGACAGGCTCCAGGGAAGGGGCTGC  90
V  86.6% (213/246)  IGHV3-23*01  47   ...............................A........T.G..GCT.....A....C........C.....................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  T  I  S  G  D  G  R  A  T  S  T  L  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6332   91   AGTGGGTCTCAACTATTAGTGGTGATGGTCGTGCCACGTCCACCTTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  86.6% (213/246)  IGHV3-23*01  137  ...........G...........AG....G..AG...A.A.TA.GC............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      M  N  T  L  Y  L  Q  L  N  S  L  R  V  D  D  S  A  L  Y  Y  C  A  R  S  P  I  V  M  S  G  
                    Query_6332   181  TGAACACTTTGTATCTGCAACTGAACAGCCTGAGAGTCGACGACTCGGCCCTGTACTATTGTGCGAGATCTCCTATTGTTATGAGCGGGA  270
V  86.6% (213/246)  IGHV3-23*01  227  A......GC...........A...............C...G...A.....G.A..T..C.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  88.9% (8/9)      IGHD3-16*02  26   -------------------------------------------------------------------------...C.....--------  34

                                      R3-IMGT------------------------>                                  
                                      T  R  F  S  S  R  A  P  L  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6332   271  CACGGTTTTCGAGTCGGGCTCCCCTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  336
J  95.2% (40/42)    IGHJ4*02     7    ------------------------.....T...............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_60810

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            307     1e-85
IGHD2-21*01                                                                                           18.0    0.60 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-21*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CAAGAATTACAAGTT	TGGTGATGATCGCTA	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGGGACAAGAATTACAAGTTTGGTGATGATCGCTACTATGATGCATTTGATTTG	TRDKNYKFGDDRYYDAFDL	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  T  Y  W  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_6333   1    GGTCCCTGAGACTCTCCTGTGCTGCCTCAGGTTTCACCTTTGGCACCTATTGGATGACATGGATCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  89.2% (223/250)  IGHV3-7*01   47   ......................A.....T..A.........A.T.G...........GC...G......................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  G  D  G  S  K  T  Y  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_6333   91   AGTGGGTGGCCAATATAAAAGGAGATGGAAGTAAGACATACTATGTGGATTCTGTGGAGGGCCGCTTCACCATCTCCAGAGACAATGCCA  180
V  89.2% (223/250)  IGHV3-7*01   137  .............C.....GCA..........G...A............C......A.......A....................C....  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  F  Y  Y  C  T  R  D  K  N  Y  K  F  G  
                    Query_6333   181  GGAACTCACTGTATCTGCAAATGAACAGCCTCAGAGTCGAGGACACGGCTTTTTATTACTGTACGAGGGACAAGAATTACAAGTTTGGTG  270
V  89.2% (223/250)  IGHV3-7*01   227  A..............................G....C.............G.G.........G....A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD2-21*01  10   -------------------------------------------------------------------------------------.....  14

                                      -IMGT----------------------->                                  
                                      D  D  R  Y  Y  D  A  F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6333   271  ATGATCGCTACTATGATGCATTTGATTTGTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  333
D  86.7% (13/15)    IGHD2-21*01  15   G....T....-----------------------------------------------------  24
J  94.0% (47/50)    IGHJ3*01     1    -------------......T......G.C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_60818

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           363     1e-102
IGHD2-2*03                                                                                            12.2    33    
IGHJ5*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-2*03	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATTCCC	TGGATTTTG	GTTCCCCCTTAGATCAA	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATTCCCTGGATTTTGGTTCCCCCTTAGATCAAAACTGGTTCGACCCC	ARNSLDFGSPLDQNWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6334   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (240/248)  IGHV3-48*03  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  G  S  S  T  M  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6334   91   AGTGGGTTTCATACATCAGTAGTGGTTCTAGTACCATGTACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (240/248)  IGHV3-48*03  137  ................T......A..GG.........A....................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  N  S  L  D  F  G  S  
                    Query_6334   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTACTTCTGTGCGAGAAATTCCCTGGATTTTGGTTCCC  270
V  96.8% (240/248)  IGHV3-48*03  227  ............A..........................................T.A..........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD2-2*03   1    ---------------------------------------------------------------------------.....A...------  9

                                      IMGT--------------------->                                  
                                      P  L  D  Q  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6334   271  CCTTAGATCAAAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
J  100.0% (49/49)   IGHJ5*02     3    -----------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_275486

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           416     2e-118
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCCCCCGTGTTCTTCTC	GGTTCGGGGAGTAATTAT	CT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCCCCGTGTTCTTCTCGGTTCGGGGAGTAATTATCTC	ARTPRVLLGSGSNYL	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	74	1	0	98.7
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	294	280	14	0	95.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_6335   1    CAGATGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  90
V  95.2% (280/294)  IGHV1-69*01  1    ...G......................................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  P  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  D  I  P  I  F  G  T  T  K  Y 
                    Query_6335   91   AGTTATCCTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGAGTGGACATCCCTATCTTTGGTACAACAAAGTAC  180
V  95.2% (280/294)  IGHV1-69*01  91   ..C...G...............................A...................G.AT...................G....C...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  M  S  S  L  R  S  E  D 
                    Query_6335   181  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACCAGCACAGCCTATATGGAAATGAGCAGCCTGAGATCTGAGGAC  270
V  95.2% (280/294)  IGHV1-69*01  181  ...............................................G...........C.....GC.......................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  R  T  P  R  V  L  L  G  S  G  S  N  Y  L  W  G  Q  G  T  L  V  T  V 
                    Query_6335   271  ACGGCCGTTTATTACTGTGCGAGAACCCCCCGTGTTCTTCTCGGTTCGGGGAGTAATTATCTCTGGGGCCAGGGAACCCTGGTCACCGTC  360
V  95.2% (280/294)  IGHV1-69*01  271  ........G...............------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.4% (17/18)    IGHD3-10*01  11   ------------------------------------------............T.....------------------------------  28
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------------------............................  41

                                             
                                       S  S  
                    Query_6335   361  TCCTCAG  367
J  100.0% (35/35)   IGHJ4*02     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_117938

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         383     1e-108
IGHD6-19*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCTTAAGGTCAATCGCGTC	CAGTGGCTGG	GCGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCA	ARHPLRSIASSGWAS	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	76	72	65	7	0	90.3
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	102	12	0	89.5
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	291	268	23	0	92.1


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  T  F  T  N 
                    Query_6336     5    GTCCAGCTGGTACAGTCTGGAGGAGAGGTGAAGAAGCCCGGGGAGTCTTTGAGGATTTCCTGTAAGGCTTCTGGATACACCTTTACCAAC  94
V  92.1% (268/291)  IGHV5-10-1*01  4    ..G........G..........C.........A...............C.......C..........G...........G........G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  W  I  S  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  R  Y  S 
                    Query_6336     95   TACTGGATCAGCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGACCCTAGTGACTCTTATACCCGCTACAGT  184
V  92.1% (268/291)  IGHV5-10-1*01  94   ........................A.....................................T..................AA......C  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  D  G  N  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  M  A  S  D  T 
                    Query_6336     185  CCGTCCTTCGACGGCAACGTCACCATCTCAGTTGACAAGTCCATCAGTACTGCCTATTTGCAGTGGAGCAGCCTGATGGCCTCGGACACC  274
V  92.1% (268/291)  IGHV5-10-1*01  184  .........C.A...C...............C...............C........CC..................A.............  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><-----------------CDR3-IMGT----------------->                              
                                         A  M  Y  Y  C  A  R  H  P  L  R  S  I  A  S  S  G  W  A  S  W  G  R  G  T  L  V  T  V  S 
                    Query_6336     275  GCCATGTATTATTGTGCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCATGGGGCCGGGGAACCCTGGTCACCGTCTCC  364
V  92.1% (268/291)  IGHV5-10-1*01  274  ...........C.........---------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                      
D  100.0% (10/10)   IGHD6-19*01    9    --------------------------------------------..........------------------------------------  18
J  97.1% (33/34)    IGHJ4*02       15   ------------------------------------------------------------.......A......................  44

                                            
                                         S  
                    Query_6336     365  TCAG  368
J  97.1% (33/34)    IGHJ4*02       45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_125728

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           445     2e-127
IGHD3-3*01                                                                                            41.1    8e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACGCCT	CGATTTTTGGAGTGGTTATTGTAC	GAGAATCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTAC	ARYASIFGVVIVRESFDY	292	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	73	1	0	98.6
CDR1-IMGT	79	102	24	24	0	0	100
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	113	1	0	99.1
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	289	4	0	98.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_6337   5    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  94
V  98.6% (289/293)  IGHV5-51*01  2    ....G.....................................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_6337   95   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACTAGATACA  184
V  98.6% (289/293)  IGHV5-51*01  92   ................................................................T.................C.......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  A  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_6337   185  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCGCCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  98.6% (289/293)  IGHV5-51*01  182  ..................................................A.......................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------------CDR3-IMGT--------------------->                   
                                      T  A  M  Y  Y  C  A  R  Y  A  S  I  F  G  V  V  I  V  R  E  S  F  D  Y  W  G  Q  G  T  L  
                    Query_6337   275  CCGCCATGTATTACTGTGCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTACTGGGGCCAGGGAACCCTGG  364
V  98.6% (289/293)  IGHV5-51*01  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  95.8% (23/24)    IGHD3-3*01   7    ------------------------------....................A...------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    --------------------------------------------------------------............................  33

                                                     
                                      V  T  V  S  S  
                    Query_6337   365  TCACCGTCTCCTCAG  379
J  100.0% (43/43)   IGHJ4*02     34   ...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_310195

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     1e-95
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	N/A	TCCTTGCCCCCGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCCTTGCCCCCGAACTAC	ASLPPNY	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  T  T  H  T  M  K  W  V  R  Q  A  P  G  K  G  L  
                    Query_6338   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCACTACCCATACCATGAAGTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  94.3% (231/245)  IGHV3-21*01  47   ....................................C.....G..G.T...G......C.................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  A  A  S  I  T  S  S  S  T  Y  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6338   91   AGTGGGCCGCATCCATTACTAGTAGTAGTACCTACACATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.3% (231/245)  IGHV3-21*01  137  ......T.T.........G...........GT....T.....................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  L  P  P  N  Y  W  G  
                    Query_6338   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGTCCTTGCCCCCGAACTACTGGGGCC  270
V  94.3% (231/245)  IGHV3-21*01  227  ....................................................G............-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  100.0% (39/39)   IGHJ4*02     10   ------------------------------------------------------------------------------............  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_6338   271  AGGGAACCCTGGTCACCGTCTCCTCAG  297
J  100.0% (39/39)   IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_310194

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           316     2e-88
IGHD6-6*01                                                                                            14.1    8.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	ATTTCTTAGGG	GCTCGTC	AGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACATTTCTTAGGGGCTCGTCAGGCTTTCACTAC	TFLRGSSGFHY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	101	13	0	88.6
CDR3-IMGT (germline)	249	250	2	2	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  D  L  D  W  V  R  Q  A  S  G  K  D  L  
                    Query_6339   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGATTTGGACTGGGTCCGCCAGGCTTCCGGGAAAGACCTGG  90
V  90.4% (226/250)  IGHV3-73*01  47   .........A.........................................C.A..C...........................GG....  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  M  R  T  K  D  D  N  Y  A  T  L  Y  A  A  S  V  R  G  R  F  T  I  S  R  D  
                    Query_6339   91   AGTGGGTTGGCCGTATGAGAACCAAAGATGACAATTACGCGACACTATATGCTGCGTCGGTGAGAGGCAGGTTCACCATCTCCAGAGATG  180
V  90.4% (226/250)  IGHV3-73*01  137  ................T....G.....C.A...G..........GC.................A..........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  N  M  A  Y  L  Q  M  S  G  L  D  T  E  D  T  A  L  Y  F  C  T  F  L  R  G  S  S  
                    Query_6339   181  ATTCAAAGAACATGGCTTATCTGCAAATGAGCGGCCTGGACACCGAGGACACGGCCCTTTACTTCTGTACATTTCTTAGGGGCTCGTCAG  270
V  90.4% (226/250)  IGHV3-73*01  227  ............C...G.............A.A.....A.A...............G.G..T.A......--------------------  296
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------.......--  17

                                      ---------->                                  
                                      G  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6339   271  GCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (43/44)    IGHJ4*02     5    -....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_310190

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     6e-96
IGHD3-9*01                                                                                            14.1    8.8  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCGAGGCGGACTTACTC	TATTTTG	CGCAGTTTGTGTCGTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATATCGAGGCGGACTTACTCTATTTTGCGCAGTTTGTGTCGTGCTTTGACTAC	AKDIEADLLYFAQFVSCFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  N  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6340   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTAATGCCATGAGCTGGGTCCGCCAGGCGCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ...........................................C..CT.........................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  H  S  G  A  N  T  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  G  N  S  
                    Query_6340   91   AGTGGGTCTCAGCTATTAGTCATAGTGGTGCTAACACATATTACGCAGACTCCGTGAAGGGCCGGTTCATCATCTCCAGAGGCAATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  ....................GG........G..G......C............................C...........A........  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  D  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  I  E  A  D  L  L  
                    Query_6340   181  AGGACACAGTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCCGTCTATTACTGTGCGAAAGATATCGAGGCGGACTTACTCT  270
V  93.6% (234/250)  IGHV3-23*01  227  ..A....GC...............................G...........A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-9*01   10   -----------------------------------------------------------------------------------------.  10

                                      R3-IMGT------------------------>                                  
                                      Y  F  A  Q  F  V  S  C  F  D  Y  W  G  P  G  I  L  V  T  V  S  S  
                    Query_6340   271  ATTTTGCGCAGTTTGTGTCGTGCTTTGACTACTGGGGCCCGGGAATTCTGGTCACCGTCTCCTCAG  336
D  100.0% (7/7)     IGHD3-9*01   11   ......------------------------------------------------------------  16
J  93.2% (41/44)    IGHJ4*02     5    ----------------------.................A.....CC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_310192

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            21.8    0.041
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGACACCTCGAGA	TTTGGAGTGGT	CAA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACACCTCGAGATTTGGAGTGGTCAAGATGCTTTTGATACC	ARHLEIWSGQDAFDT	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6341   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCATCTTTAGCAACTACGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (228/245)  IGHV3-23*01  47   ....................G...............C........G...T.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  F  G  V  R  G  V  A  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6341   91   AGTGGGTCTCAACTTTTGGTGTTAGAGGTGTTGCCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (228/245)  IGHV3-23*01  137  ...........G..A..A...G...T....G.AG........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  H  L  E  I  W  S  G  
                    Query_6341   181  AGAACACCCTTTATCTGCAAATGCACAGCCTGAGAGCCGAGGACACGGCCGTATATTATTGTGCGCGACACCTCGAGATTTGGAGTGGTC  270
V  93.1% (228/245)  IGHV3-23*01  227  .......G..G............A..................................C......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD3-3*01   12   ------------------------------------------------------------------------------...........-  22

                                      ---------------->                                  
                                      Q  D  A  F  D  T  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6341   271  AAGATGCTTTTGATACCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  98.0% (48/49)    IGHJ3*02     2    --.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_299744

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           405     4e-115
IGHD2-21*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	ATTTTGGTGG	ATAGAGATAGAGTTCC	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTC	ARGGFWWIEIEFRMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  Y 
                    Query_6342   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACCGACTAT  91
V  94.8% (274/289)  IGHV1-18*01  7    .............................................................................C......AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  W  I  S  A  Y  T  G  N  T  K  N  A  Q 
                    Query_6342   92   GGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGATGGATCAGCGCTTACACTGGTAATACAAAAAATGCACAA  181
V  94.8% (274/289)  IGHV1-18*01  97   .......G.....................................A.....................A......C.....CT.......G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  V  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_6342   182  AAAGTCCAGGGCAGAGTGACCATGACCACAGACACATCCACGAGAACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (274/289)  IGHV1-18*01  187  ..GC.............C..........................C...............C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  G  G  F  W  W  I  E  I  E  F  R  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_6342   272  GTGTATTACTGTGCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  361
V  94.8% (274/289)  IGHV1-18*01  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD2-21*01  6    -----------------------...G......---------------------------------------------------------  15
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------.........................................  59

                                         
                                       S 
                    Query_6342   362  TCA  364
J  100.0% (44/44)   IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_299745

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD6-19*01                                                                                           12.2    30   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTGGC	GGCTGG	CTTAC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTGGCGGCTGGCTTACGGACGTC	TRGGGWLTDV	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6343   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTGGTTTCTACTGGAGCTGGATTCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   .............................T............A...A...............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  H  Y  S  G  H  T  N  Y  N  P  S  L  R  S  R  V  I  I  S  L  D  T  S  N  N 
                    Query_6343   91   TGGATTGGGAATATCCACTACAGTGGGCACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCATCATATCGCTGGACACGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  .........T.....T.T.........AG.......................A...........C......AG.A...........G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  I  S  L  K  V  N  S  G  T  A  A  D  T  A  L  Y  Y  C  T  R  G  G  G  W  L  T  D  V  W 
                    Query_6343   181  CAGATCTCCCTGAAGGTGAACTCTGGGACCGCTGCGGACACGGCCCTCTATTATTGTACGAGAGGTGGCGGCTGGCTTACGGACGTCTGG  270
V  90.6% (221/244)  IGHV4-59*01  229  ...T...........C...G.....T...................G.G.....C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  13   ---------------------------------------------------------------------......---------------  18
J  100.0% (40/40)   IGHJ6*02     23   --------------------------------------------------------------------------------..........  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_6343   271  GGCCAAGGGACCACGGTCACCGTCTCCTCA  300
J  100.0% (40/40)   IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_299747

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            344     6e-97
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AACCT	ATAGTAGTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACCTATAGTAGTGGCCCCTTTGTCTAC	ATYSSGPFVY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	232	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  D  F  T  F  T  I  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6344   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGACTTCACGTTTACTATCTATTGGATGACCTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.1% (232/244)  IGHV3-7*01   47   ..............................GA.....C....G..G...........G.....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  T  N  Q  D  G  S  G  K  Y  Y  V  D  S  V  K  G  R  L  T  I  S  R  D  N  A  
                    Query_6344   91   AGTGGGTGGCCAACACAAACCAAGATGGAAGTGGGAAATACTATGTGGACTCTGTGAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  95.1% (232/244)  IGHV3-7*01   137  ...............T...G.............A...............................T........................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  Y  S  S  G  P  F  V  
                    Query_6344   181  AGAACTCACTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAACCTATAGTAGTGGCCCCTTTGTCT  270
V  95.1% (232/244)  IGHV3-7*01   227  ................G...............................................--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD3-22*01  12   ---------------------------------------------------------------------..........-----------  21
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------.....A..  12

                                      ->                                  
                                      Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_6344   271  ACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  306
J  95.5% (42/44)    IGHJ4*02     13   ..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_310199

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     8e-121
IGHD3-16*02                                                                                           37.2    1e-06 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGTC	CGTTTGGGGGAATTATCGTTAT	TTGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCGTTTGGGGGAATTATCGTTATTTGGGCTAC	ARGSVWGNYRYLGY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	280	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_6345   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  96.9% (280/289)  IGHV5-51*01  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_6345   91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  96.9% (280/289)  IGHV5-51*01  96   C...................................................A........................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  T  T  T  A  Y  L  Q  W  N  S  L  R  A  S  D  T  A
                    Query_6345   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCACCACTACCGCCTACCTGCAGTGGAACAGCCTGAGGGCCTCGGACACCGC  270
V  96.9% (280/289)  IGHV5-51*01  186  .........................................T..GC...................G........A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  G  S  V  W  G  N  Y  R  Y  L  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6345   271  CATATATTACTGTGCGAGAGGGTCCGTTTGGGGGAATTATCGTTATTTGGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  96.9% (280/289)  IGHV5-51*01  276  ...G...............----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  95.5% (21/22)    IGHD3-16*02  13   ------------------------...........G..........-------------------------------------------  34
J  100.0% (38/38)   IGHJ4*02     11   ---------------------------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_324424

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           293     2e-81
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	236	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	19	22	4	4	0	0	100
CDR1-IMGT	23	46	24	20	4	0	83.3
FR2-IMGT	47	97	51	51	0	0	100
CDR2-IMGT	98	121	24	21	3	0	87.5
FR3-IMGT	122	235	114	106	8	0	93
Total	N/A	N/A	217	202	15	0	93.1


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_6346   19   GTCTGGATTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  108
V  93.1% (202/217)  IGHV3-33*03  72   ............C..C.....C.....C..............................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  I  K  R  Y  Y  A  D  S  V  K  G  R  F  T  I  F  R  D  D  S  K  N  T  L  F  L  Q  M  N
                    Query_6346   109  TGGAATTAAGAGATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTTCAGAGACGACTCCAAGAACACCCTGTTTCTGCAGATGAA  198
V  93.1% (202/217)  IGHV3-33*03  162  .....G...T.A......................................C.......A.............G....A......A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------CDR3-IMGT----------->                    
                                        S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  D  P  W  G  Q  G  T  Q  V
                    Query_6346   199  CAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCGACCCCTGGGGCCAGGGAACCCAGGT  288
V  93.1% (202/217)  IGHV3-33*03  252  .........................G.G.....C...-----------------------------------------------------  288
                                        S  L  R  A  E  D  T  A  V  Y  Y  C                                                      
D  90.9% (10/11)    IGHD6-13*01  7    ------------------------------------------....G......-------------------------------------  17
J  97.8% (45/46)    IGHJ5*02     6    ----------------------------------------------------------............................T...  37

                                                    
                                        T  V  S  S  
                    Query_6346   289  CACCGTCTCCTCAG  302
J  97.8% (45/46)    IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_299743

Length=317
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     6e-98
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCTAGGAGATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCTAGGAGATCTTGACTAC	ASLGDLDY	238	261	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	232	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  R  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  Q 
                    Query_6347   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCGTTACTTCTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGCAG  90
V  95.9% (232/242)  IGHV4-59*01  49   ..........................................A......A.....G...............................G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  T  S  Q  N 
                    Query_6347   91   TGGATTGGATATATCTCTTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTGGACACGTCCCAGAAC  180
V  95.9% (232/242)  IGHV4-59*01  139  ........G.......A...C..........................................A..........A.........A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------CDR3-IMGT------>         
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  G  D  L  D  Y  W  G  Q 
                    Query_6347   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGTCTAGGAGATCTTGACTACTGGGGCCAG  270
V  95.9% (232/242)  IGHV4-59*01  229  ..............................................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------.................  23

                                                               
                                       G  T  L  V  T  V  S  S  
                    Query_6347   271  GGAACCCTGGTCACCGTCTCCTCAG  295
J  100.0% (42/42)   IGHJ4*02     24   .........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30621390


Query= Query_109271

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           227     9e-62
IGHD3-3*01                                                                                            14.1    8.7  
IGHJ4*02                                                                                              29.5    5e-04


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGACA	ACGCTATTATTACAATCAGG	GTGGTTCGTATAC	TTCGCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACAACGCTATTATTACAATCAGGGTGGTTCGTATACTTCGCCTTTTGACCTC	AGQRYYYNQGGSYTSPFDL	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	19	11	0	63.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	84	30	0	73.7
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	198	53	0	78.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  F  R  N  D  R  R  Y  W  A  W  V  R  Q  P  P  G  K  G 
                    Query_6348   1    ACCCTGTCCCTCACCTGCACTGTCTCCGGTGACTCCTTCCGGAATGATAGACGCTATTGGGCCTGGGTCCGTCAGCCCCCAGGGAAGGGA  90
V  78.9% (198/251)  IGHV4-39*01  49   ..........................T....G....A..A.C.G.AG...TTA...C....G....A....C.................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  F  W  S  G  T  T  Y  Y  N  P  S  L  R  R  R  V  T  I  S  V  D  D  S 
                    Query_6348   91   CTGGAGTGGATTGGGACTATTTTTTGGAGTGGGACCACCTACTATAACCCCTCCCTCCGGCGTCGGGTCACCATTTCCGTCGACGACTCC  180
V  78.9% (198/251)  IGHV4-39*01  139  ................G...C.A..AT.......G.........C.....G......AA.A....A........A.....A...ACG...  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       Y  N  R  F  S  L  R  L  H  S  V  T  A  A  D  A  G  L  Y  H  C  A  G  Q  R  Y  Y  Y  N  Q 
                    Query_6348   181  TATAATCGCTTCTCCCTGCGACTTCACTCCGTGACCGCCGCAGACGCGGGCCTCTATCATTGTGCGGGACAACGCTATTATTACAATCAG  270
V  78.9% (198/251)  IGHV4-39*01  229  A.G..C.AG.........AAG..GAG...T...............A...CTG.G...T.C......A....-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                           
                                       G  G  S  Y  T  S  P  F  D  L  W  G  R  G  T  V  V  A  V 
                    Query_6348   271  GGTGGTTCGTATACTTCGCCTTTTGACCTCTGGGGCCGGGGGACCGTGGTGGCCGTC  327
D  84.6% (11/13)    IGHD3-3*01   18   -......AT.....-------------------------------------------  30
J  80.6% (29/36)    IGHJ4*02     6    ---------------------......TA........A...A...C....CA.....  41


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_324425

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           329     3e-92
IGHD3-22*01                                                                                           21.8    0.040
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGAA	AGTGGTTATTA	N/A	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGAAAGTGGTTATTATGAAGCTTTTGATATG	ARSESGYYEAFDM	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  L  S  N  Y  D  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6349   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCCTCAGCAACTATGATATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.3% (229/248)  IGHV3-30*04  47   ...................................A..T....T.G.....C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  I  I  S  Y  D  G  G  N  K  N  Y  A  D  S  V  R  G  R  F  T  L  S  R  D  N  S  
                    Query_6349   91   AGTGGGTATCAATTATATCATATGATGGAGGAAATAAAAATTACGCAGACTCCGTGAGGGGCCGATTCACCTTGTCCAGAGACAATTCCA  180
V  92.3% (229/248)  IGHV3-30*04  137  .......GG..G.................A.T......T.C................A.............A.C................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  F  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  E  S  G  Y  Y  E  
                    Query_6349   181  AGAACACGCTGTTTCTGCAAATGAACAACCTGCGCGCTGAGGACACGGCTGTGTATTACTGTGCGAGATCGGAAAGTGGTTATTATGAAG  270
V  92.3% (229/248)  IGHV3-30*04  227  ............A..............G....A.A.................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-22*01  17   --------------------------------------------------------------------------...........-----  27
J  88.0% (44/50)    IGHJ3*02     1    -------------------------------------------------------------------------------------...T.  5

                                      ---------->                                  
                                      A  F  D  M  W  G  P  G  T  V  V  T  V  A  S  
                    Query_6349   271  CTTTTGATATGTGGGGCCCAGGGACAGTGGTCACCGTCGCCTCAG  315
J  88.0% (44/50)    IGHJ3*02     6    ..........C.......A.......A...........T.T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_141999

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6350   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ......................................C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_6350   91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P 
                    Query_6350   181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC  270
V  90.6% (221/244)  IGHV4-59*01  229  ...........G...C....C...........T............G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  95.7% (44/46)    IGHJ5*02     6    ------------------------------------------------------------------------------............  17

                                                                        
                                       W  G  Q  G  A  L  V  S  V  S  S  
                    Query_6350   271  TGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  304
J  95.7% (44/46)    IGHJ5*02     18   ............A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_141998

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           344     6e-97
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTTCG	GCAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTCGGCAGCAGCTGACTGACTAC	ARDFRQQLTDY	239	271	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	10	1	0	90.9
CDR1-IMGT	26	49	24	24	0	0	100
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	22	2	0	91.7
FR3-IMGT	125	238	114	112	2	0	98.2
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	232	226	6	0	97.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  S  S  Y  S  M  N  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  
                    Query_6351   15   GTGCAGTCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTA  104
V  97.4% (226/232)  IGHV3-21*01  65   ......C.....................................G.............................................  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  S  G  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  G  N  A  K  N  S  L  Y  L  
                    Query_6351   105  GTAGTAGTGGTACTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGGCAACGCCAAGAACTCACTGTATCTGC  194
V  97.4% (226/232)  IGHV3-21*01  155  ........A...G..................................................A..........................  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-----------CDR3-IMGT----------->             
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  R  Q  Q  L  T  D  Y  W  G  Q  G  
                    Query_6351   195  AAATGAACAGCCTGAGAGCCGAAGACACGGCTGTGTATTACTGTGCGAGAGATTTTCGGCAGCAGCTGACTGACTACTGGGGCCAGGGAA  284
V  97.4% (226/232)  IGHV3-21*01  245  ......................G.............................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (10/10)   IGHD6-13*01  8    ----------------------------------------------------------..........----------------------  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------....................  27

                                                           
                                      T  L  V  T  V  S  S  
                    Query_6351   285  CCCTGGTCACCGTCTCCTCAG  305
J  100.0% (41/41)   IGHJ4*02     28   .....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_93787

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           427     9e-122
IGHD1-26*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGG	GTGGGAGCTAC	GAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGTGGGAGCTACGAAACTTTGACTAC	ARGGWELRNFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_6352   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  97.2% (281/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  M  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  A  G  D  S  D  T  R  Y  S  P
                    Query_6352   91   CTGGATCGGCTGGATGCGCCAGATGCCCGGGAAAGGCCTCGAGTGGATGGGGATCATCTATGCGGGTGACTCTGATACCAGATACAGCCC  180
V  97.2% (281/289)  IGHV5-51*03  96   .............G.........................G.....................C.T..........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  F  L  Q  W  S  S  L  K  A  S  D  S  A
                    Query_6352   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACTCCGC  270
V  97.2% (281/289)  IGHV5-51*03  186  ............................................G........A...............................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  G  G  W  E  L  R  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6352   271  CATGTATTACTGTGCGAGAGGGGGGTGGGAGCTACGAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  97.2% (281/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (11/11)   IGHD1-26*01  7    ------------------------...........------------------------------------------------  17
J  100.0% (45/45)   IGHJ4*02     4    --------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_324420

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD1-26*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTGTTTTC	TGGGACCTACTAC	CTTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTAC	ARVFSGTYYLLDY	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	69	5	0	93.2
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	111	3	0	97.4
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	279	14	0	95.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  R  A  E  V  K  K  P  G  E  S  L  K  I  S  C  T  A  F  G  Y  S  F  T  
                    Query_6353   4    AGATGCAGCTGGTGCAGTCTAGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTACGGCTTTTGGATACAGCTTTACCA  93
V  95.2% (279/293)  IGHV5-51*03  2    ..G.................G.............................................A..G..C.................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  R  D  G  E  T  R  Y  
                    Query_6353   94   GTTATTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTCGTGACGGTGAAACCAGATACA  183
V  95.2% (279/293)  IGHV5-51*03  92   .C..C...............................................................G.....TC...T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  
                    Query_6353   184  GCCCGTCCTTCCAAGGCCAGGTCAGCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACA  273
V  95.2% (279/293)  IGHV5-51*03  182  ........................C....................................................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                
                                      T  A  M  Y  Y  C  A  R  V  F  S  G  T  Y  Y  L  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6353   274  CCGCCATGTATTATTGTGCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  361
V  95.2% (279/293)  IGHV5-51*03  272  .............C.........-----------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                  
D  92.3% (12/13)    IGHD1-26*01  8    -------------------------------.....G.......--------------------------------------------  20
J  100.0% (40/40)   IGHJ4*02     7    ------------------------------------------------........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_10321

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           318     6e-89
IGHD2-8*02                                                                                            18.0    0.60 
IGHJ5*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATTGTCGGTGTTGGC	TATTGCACTGGT	AGCAGTTGTTCCCCTCCGTCTGCCG	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGTCGGTGTTGGCTATTGCACTGGTAGCAGTTGTTCCCCTCCGTCTGCCGCC	ARIVGVGYCTGSSCSPPSAA	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  F  S  Y  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_6354   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGGTCCTTCAGTTATTACTACTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTGGAG  90
V  91.8% (223/243)  IGHV4-34*01  49   ..................G......A................GG............C...A.............A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  D  I  N  Q  S  G  S  T  N  Y  S  P  S  L  E  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_6354   91   TGGATTGGTGACATCAATCAAAGTGGAAGCACCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCATATCAATAGACACGTCGAAGAAC  180
V  91.8% (223/243)  IGHV4-34*01  139  ........G..A........T...................A..........A....................G..........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  K  S  L  A  A  A  D  T  A  V  Y  F  C  A  R  I  V  G  V  G  Y  C  T  G 
                    Query_6354   181  CAGTTCTCCCTGAAGCTGAAGTCTTTGGCCGCCGCGGACACGGCTGTCTATTTCTGTGCGAGAATTGTCGGTGTTGGCTATTGCACTGGT  270
V  91.8% (223/243)  IGHV4-34*01  229  ...................GC...G..A...................G....A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD2-8*02   5    ------------------------------------------------------------------------------.....T......  16

                                      GT------------------------>                                
                                       S  S  C  S  P  P  S  A  A  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6354   271  AGCAGTTGTTCCCCTCCGTCTGCCGCCTGGGGCCAGGGAACTCTGGTCACCGTCTCCTC  329
J  97.1% (33/34)    IGHJ5*02     16   -------------------------................C.................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_10326

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           352     3e-99
IGHD2-15*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CTGG	TTGCAGTGGTGGTAGCTGCT	N/A	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCTGGTTGCAGTGGTGGTAGCTGCTACTATTTTGACTAC	AKAGCSGGSCYYFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6355   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-23*01  47   .........................................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  I  I  F  G  N  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6355   91   AGTGGGTCTCAATTATTTTTGGAAATGGTGGTACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCTAGAGACAATGCCA  180
V  95.2% (237/249)  IGHV3-23*01  137  ...........GC....AG...T.G........G..........................................C.........T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  T  L  D  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  G  C  S  G  G  S  
                    Query_6355   181  GGAACACGCTGGATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGCTGGTTGCAGTGGTGGTAGCT  270
V  95.2% (237/249)  IGHV3-23*01  227  A..........T.........................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.0% (19/20)    IGHD2-15*01  7    -------------------------------------------------------------------------...T.............  23

                                      ---------------->                                  
                                      C  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  F  S  S  
                    Query_6355   271  GCTACTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCTTCTCCTCAG  321
D  95.0% (19/20)    IGHD2-15*01  24   ...------------------------------------------------  26
J  95.8% (46/48)    IGHJ4*02     1    ---....C.................................G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_10327

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGTCCCGACTGAACTACGGCATGGACGTC	ARLMSRLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  S  N  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_6356   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATCAGCAATTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G.........T.G................A............................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6356   91   TGGATTGAGTACATCTATTACAGGGGGAGTCCCAATAACGACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G...T...........T.....CA....CT..A..................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_6356   181  CAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTAATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  .............A.C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  96.0% (48/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6356   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  309
J  96.0% (48/50)    IGHJ6*02     24   ...................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_268634

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           372     2e-105
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CCGGAGGCAAAGACCCCAAG	ATTACTATGGTTCGGGGAGTT	CA	TACAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCCGGAGGCAAAGACCCCAAGATTACTATGGTTCGGGGAGTTCATACAACTACTACGGTATGGACGTC	ARRQRPQDYYGSGSSYNYYGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	241	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6357   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.8% (241/244)  IGHV3-33*01  47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_6357   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGACTCACCATCTCCAGAGACAATTCCA  180
V  98.8% (241/244)  IGHV3-33*01  137  .................................................................T........................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  R  Q  R  P  Q  D  Y  
                    Query_6357   181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCCCGGAGGCAAAGACCCCAAGATTACT  270
V  98.8% (241/244)  IGHV3-33*01  227  ..............C.................................................--------------------------  290
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (21/21)   IGHD3-10*01  3    ------------------------------------------------------------------------------------......  8

                                      --CDR3-IMGT----------------------------->                                 
                                      Y  G  S  G  S  S  Y  N  Y  Y  G  M  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_6357   271  ATGGTTCGGGGAGTTCATACAACTACTACGGTATGGACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  344
D  100.0% (21/21)   IGHD3-10*01  9    ...............-----------------------------------------------------------  23
J  96.5% (55/57)    IGHJ6*02     6    -----------------...T...........................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_268635

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           297     7e-83
IGHD3-3*01                                                                                            29.5    2e-04
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CATCGATCCCGGGG	ATTACGATTTCGGGAGTGGTT	T	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACATCGATCCCGGGGATTACGATTTCGGGAGTGGTTTCTACGGTTTGGACGTC	ARDIDPGDYDFGSGFYGLDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	18	21	4	4	0	0	100
CDR1-IMGT	22	45	24	22	2	0	91.7
FR2-IMGT	46	96	51	51	0	0	100
CDR2-IMGT	97	123	27	21	3	3	77.8
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	228	211	14	3	92.5


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--------CD
                                        S  G  F  T  F  S  T  Y  V  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  N  D
                    Query_6358   18   GTCTGGATTCACCTTCAGTACCTATGTCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGAATGA  107
V  92.5% (211/228)  IGHV3-33*01  72   ....................G.....G..........................................................T....  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      R2-IMGT--------><----------------------------------------------------FR3-IMGT-------------
                                        G  T  D  N  K  N  Y  A  D  S  V  K  G  Q  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  V
                    Query_6358   108  TGGAACTGATAATAAGAATTATGCAGACTCCGTGAAGGGCCAATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATTTGCAAGT  197
V  92.5% (211/228)  IGHV3-33*01  162  .....G.---.....AT.C......................G........................................C.....A.  248
                                        G  S     N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M

                                      ---------------------------------------><-------------------------CDR3-IMGT---------------
                                        N  S  V  R  D  E  D  T  A  V  Y  Y  C  A  R  D  I  D  P  G  D  Y  D  F  G  S  G  F  Y  G
                    Query_6358   198  GAACAGTGTGAGAGACGAGGACACGGCTGTCTATTACTGTGCGAGAGACATCGATCCCGGGGATTACGATTTCGGGAGTGGTTTCTACGG  287
V  92.5% (211/228)  IGHV3-33*01  249  ......CC......C...............G.................------------------------------------------  296
                                        N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                             
D  90.5% (19/21)    IGHD3-3*01   3    --------------------------------------------------------------..........TT.........-------  23
J  95.9% (47/49)    IGHJ6*02     14   ------------------------------------------------------------------------------------......  19

                                      --------->                                 
                                        L  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_6358   288  TTTGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  330
J  95.9% (47/49)    IGHJ6*02     20   .A..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_268636

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           325     3e-91
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GTCCTGGGTACTCT	GGAGTT	GC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCCTGGGTACTCTGGAGTTGCCTTTGACCAC	ARRPGYSGVAFDH	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  D  F  I  S  T  Y  Y  W  N  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_6359   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGACTTCATCAGTACTTATTATTGGAATTGGATCCGGCAGGCCCCAGGGAAGGGACTGGAG  90
V  92.6% (226/244)  IGHV4-59*08  49   ...................C...........G..C........G...C..C....GC............C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  D  T  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_6359   91   TGGATTGGGTATATCTACTACAGTGGGAGCACCGACACCAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAC  180
V  92.6% (226/244)  IGHV4-59*08  139  .................T...............A..TA..............................A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  P  G  Y  S  G  V  A  F 
                    Query_6359   181  CAATTCTCCCTGAAGTTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACGTCCTGGGTACTCTGGAGTTGCCTTT  270
V  92.6% (226/244)  IGHV4-59*08  229  ..G............C....C..........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-10*01  18   ------------------------------------------------------------------------------......------  23
J  93.2% (41/44)    IGHJ4*02     5    --------------------------------------------------------------------------------------....  8

                                      ----->                                  
                                       D  H  W  G  Q  G  K  L  V  T  V  S  S  
                    Query_6359   271  GACCACTGGGGCCAGGGAAAACTGGTCACCGTCTCCTCAG  310
J  93.2% (41/44)    IGHJ4*02     9    ...T...............CC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_268637

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTTCTTTGACTTC	ARDSSWNGVDFFDF	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6360   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ........................................G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_6360   91   TGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ........G...A..T...............................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  F 
                    Query_6360   181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTTC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............C....C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  93.8% (45/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------...A.  5

                                      -------->                                  
                                       F  D  F  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_6360   271  TTTGACTTCTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  313
J  93.8% (45/48)    IGHJ4*02     6    .......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_268630

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           350     8e-99
IGHD3-16*01                                                                                           12.2    32   
IGHJ2*01                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	TTGGGG	CAGGTTATGT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGGCAGGTTATGTCTGGTACTTCGATCTC	ARDLGAGYVWYFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  F  S  S  Y  T  M  N  W  V  R  Q  A  P  G  Q  G  L  
                    Query_6361   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCTTCAGCAGCTATACCATGAACTGGGTCCGCCAGGCTCCAGGGCAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-21*01  47   ...................................A.......T.......G............................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  I  G  S  S  D  F  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6361   91   AGTGGGTCTCATCCATTATTGGTAGTAGTGATTTCATATACTATGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (237/250)  IGHV3-21*01  137  ..................G.A........AG..A.........C..............................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  S  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  G  A  G  Y  V  
                    Query_6361   181  AGAACTCACTGTCTCTGCAAATGAACAACCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGATCTTGGGGCAGGTTATGTCT  270
V  94.8% (237/250)  IGHV3-21*01  227  ............A..............G........................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  16   ------------------------------------------------------------------------......------------  21
J  100.0% (50/50)   IGHJ2*01     4    ----------------------------------------------------------------------------------------..  5

                                      ------------->                                  
                                      W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6361   271  GGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  318
J  100.0% (50/50)   IGHJ2*01     6    ................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_268632

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           343     2e-96
IGHD3-16*02                                                                                           14.1    8.2  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	231	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  H  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6362   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACCACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (231/243)  IGHV4-59*01  49   ................................................T.........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S  K  N 
                    Query_6362   91   TGGATTGGGTATATCTATTACAGTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCCAAAAAC  180
V  95.1% (231/243)  IGHV4-59*01  139  .............................CAC..A.........................G.CA....A.................G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y  R  D 
                    Query_6362   181  CAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTATCGTGAT  270
V  95.1% (231/243)  IGHV4-59*01  229  .............A.................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------.......----  30
J  92.0% (46/50)    IGHJ3*02     1    --------------------------------------------------------------------------------------....  4

                                      ----------->                                  
                                       A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_6362   271  GCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  316
J  92.0% (46/50)    IGHJ3*02     5    .....T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_268638

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD1-26*01                                                                                           18.0    0.60 
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAACAGTTTGTTGGCACCTG	AGTGGGAGC	CTGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACAGTTTGTTGGCACCTGAGTGGGAGCCTGATGATGCTTTTGATATC	ARVNSLLAPEWEPDDAFDI	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  R  S  W  W  S  W  V  R  Q  P  P  G  K  G  P 
                    Query_6363   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGCAGAAGCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCCG  90
V  93.5% (231/247)  IGHV4-4*02   49   ...............................G............T..T.A......................................T.  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  N  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  K  S  K 
                    Query_6363   91   GAGTGGATTGGGGAGATCTATCATGGTGGGAATACCAACTACAACCCGTCCCTCAAGAGTCGACTTACTATATCAGTAGACAAGTCCAAG  180
V  93.5% (231/247)  IGHV4-4*02   139  ..............A.........A......GC..............................G.C..C.....................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       N  Q  F  S  L  Q  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  S  L  L  A  P  E 
                    Query_6363   181  AACCAATTCTCCCTGCAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGAGAGTTAACAGTTTGTTGGCACCTGAG  270
V  93.5% (231/247)  IGHV4-4*02   229  .....G.........A.......C..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD1-26*01  6    ----------------------------------------------------------------------------------------..  7

                                      MGT----------------------->                                  
                                       W  E  P  D  D  A  F  D  I  W  G  Q  G  T  L  A  I  V  S  S  
                    Query_6363   271  TGGGAGCCTGATGATGCTTTTGATATCTGGGGCCAAGGGACATTGGCCATCGTCTCTTCAG  331
D  100.0% (9/9)     IGHD1-26*01  8    .......------------------------------------------------------  14
J  94.0% (47/50)    IGHJ3*02     1    -----------...............................A...T..C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_125408

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           353     1e-99
IGHD2-2*01                                                                                            14.1    9.0  
IGHJ1*01                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-2*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGCCGGTTTTCTCG	AGGATCTTTTAGCAATAGCAGATGC	CACGAAAACGTTCCTTGAT	CACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGCCGGTTTTCTCGAGGATCTTTTAGCAATAGCAGATGCCACGAAAACGTTCCTTGATCAC	AKDAGFLEDLLAIADATKTFLDH	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6364   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATACTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-30*18  47   ..........................................G..GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  M  S  Y  D  G  I  N  K  H  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  S  
                    Query_6364   91   AGTGGGTGGCCATTATGTCATATGATGGAATTAATAAACACTATGCAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAACTCCA  180
V  95.2% (238/250)  IGHV3-30*18  137  ..........AG....A.............G.......T..............................C...............T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  A  G  F  L  E  D  
                    Query_6364   181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTATATTACTGTGCGAAAGATGCCGGTTTTCTCGAGGATC  270
V  95.2% (238/250)  IGHV3-30*18  227  .......G............................................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  76.0% (19/25)    IGHD2-2*01   1    ------------------------------------------------------------------------------------.....A  6

                                      --CDR3-IMGT----------------------------->                                  
                                      L  L  A  I  A  D  A  T  K  T  F  L  D  H  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_6364   271  TTTTAGCAATAGCAGATGCCACGAAAACGTTCCTTGATCACTGGGGCCAGGGGACCCTGGTCATCGTCTCCTCAG  345
D  76.0% (19/25)    IGHD2-2*01   7    ..G...T.G..C...C...--------------------------------------------------------  25
J  94.6% (35/37)    IGHJ1*01     16   --------------------------------------..............C..........C...........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_53908

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           321     7e-90
IGHD3-16*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCTGCGGACTGG	GATTACG	GTT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCTGCGGACTGGGATTACGGTTACTGGTTTGACCAC	AKAADWDYGYWFDH	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6365   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCGCCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.5% (226/247)  IGHV3-23*01  47   ............................................AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  G  S  H  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6365   91   AGTGGGTCTCAGGTATTAGTGGTGGTTCTCATAATACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.5% (226/247)  IGHV3-23*01  137  ............C..........A..GG.GG..GC.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  L  R  M  N  N  L  R  A  E  D  A  A  L  Y  Y  C  A  K  A  A  D  W  D  Y  G  
                    Query_6365   181  AGAACACGCTCTCTCTGCGCATGAACAATCTCAGAGCCGAGGACGCGGCCCTATACTACTGTGCGAAGGCTGCGGACTGGGATTACGGTT  270
V  91.5% (226/247)  IGHV3-23*01  227  ..........G.A.....AA.......GC..G............A.....G....T...........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  8    --------------------------------------------------------------------------------.......---  14

                                      ------------->                                  
                                      Y  W  F  D  H  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_6365   271  ACTGGTTTGACCACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  93.8% (45/48)    IGHJ5*02     4    .......C....C..............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_125401

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           271     7e-75
IGHD1-20*01                                                                                           21.8    0.041
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAACGATTA	TATAACTGGAA	TTCAGTCACAAGGGGTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAACGATTATATAACTGGAATTCAGTCACAAGGGGTGACTACGGTATGGACGTC	ARQRLYNWNSVTRGDYGMDV	235	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	19	5	0	79.2
FR2-IMGT	49	99	51	49	2	0	96.1
CDR2-IMGT	100	120	21	15	6	0	71.4
FR3-IMGT	121	234	114	100	14	0	87.7
CDR3-IMGT (germline)	235	240	6	6	0	0	100
Total	N/A	N/A	227	200	27	0	88.1


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  S  V  S  T  N  F  V  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  M  
                    Query_6366   14   GTGCAGCCTCTGGGTTCAGTGTCAGTACCAATTTCGTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATGT  103
V  88.1% (200/227)  IGHV3-53*01  65   ..................CC.......G...C.A.A...G................................................T.  154
                                         A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  

                                      --CDR2-IMGT-----><----------------------------------------------------FR3-IMGT------------
                                      F  S  G  G  A  T  Y  Y  A  D  S  V  E  G  R  F  T  V  S  R  D  T  S  K  N  S  L  D  L  E  
                    Query_6366   104  TTAGTGGTGGTGCCACCTACTACGCAGACTCCGTGGAGGGCCGATTCACCGTCTCCAGAGACACTTCCAAGAACTCGTTGGATCTTGAGA  193
V  88.1% (200/227)  IGHV3-53*01  155  A...C......AG...A..................A..............A............A..........A..C..T.....C.A.  244
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  

                                      ----------------------------------------><-------------------------CDR3-IMGT--------------
                                      M  N  N  L  R  V  D  D  T  A  V  Y  Y  C  A  R  Q  R  L  Y  N  W  N  S  V  T  R  G  D  Y  
                    Query_6366   194  TGAATAACCTGAGAGTCGACGACACGGCCGTCTATTATTGTGCGAGACAACGATTATATAACTGGAATTCAGTCACAAGGGGTGACTACG  283
V  88.1% (200/227)  IGHV3-53*01  245  ....C.G........C...G...........G.....C.........-------------------------------------------  291
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                            
D  100.0% (11/11)   IGHD1-20*01  3    --------------------------------------------------------...........-----------------------  13
J  100.0% (50/50)   IGHJ6*02     13   ------------------------------------------------------------------------------------......  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6366   284  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  327
J  100.0% (50/50)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_53906

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           360     1e-101
IGHD5-18*01                                                                                           19.9    0.16  
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTAGA	CAGGCAGCTTTC	GGATACAGTTTTGGTT	TCGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGACAGGCAGCTTTCGGATACAGTTTTGGTTTCGGCTGGTGCGACCCC	TRQAAFGYSFGFGWCDP	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	110	4	0	96.5
CDR3-IMGT (germline)	249	254	6	6	0	0	100
Total	N/A	N/A	254	242	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  G  D  Y  T  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6367   1    GGTCCCTGAGACTCTCCTGTTCAGCTTCTGGATTCACCTTTGGTGATTATACTATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.3% (242/254)  IGHV3-49*04  47   ....................A.............................G......G................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  A  F  I  R  S  K  T  H  G  G  T  T  E  Y  A  A  S  V  R  G  R  F  S  I  S  R  D  
                    Query_6367   91   AGTGGGTTGCTTTCATCAGAAGCAAAACTCATGGTGGGACAACAGAATACGCCGCGTCTGTGAGAGGCAGATTCAGCATCTCAAGAGATG  180
V  95.3% (242/254)  IGHV3-49*04  137  .......A.G......T.........G..T.................................A...........C..............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  G  V  Y  Y  C  T  R  Q  A  A  F  G  
                    Query_6367   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGGCGTGTATTATTGTACTAGACAGGCAGCTTTCGGAT  270
V  95.3% (242/254)  IGHV3-49*04  227  ......................................................C.........C.........----------------  300
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  87.5% (14/16)    IGHD5-18*01  3    --------------------------------------------------------------------------------------....  6

                                      DR3-IMGT-------------------->                                  
                                      Y  S  F  G  F  G  W  C  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6367   271  ACAGTTTTGGTTTCGGCTGGTGCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  87.5% (14/16)    IGHD5-18*01  7    ....C.A.....---------------------------------------------------  18
J  97.9% (46/47)    IGHJ5*02     5    ----------------.....T.........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_202913

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           344     6e-97
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGCCCACCGATTAATCTTC	GATAGAAGTGGTTATTACT	TGCGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGCCCACCGATTAATCTTCGATAGAAGTGGTTATTACTTGCGCGAC	ERPPINLR*KWLLLAR	242	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	25	27	25	0	2	92.6
CDR1-IMGT	26	55	30	30	0	0	100
FR2-IMGT	56	106	51	49	2	0	96.1
CDR2-IMGT	107	127	21	21	0	0	100
FR3-IMGT	128	241	114	106	8	0	93
CDR3-IMGT (germline)	242	246	5	5	0	0	100
Total	N/A	N/A	248	236	10	2	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T    L  W  W  L  H  Q  Q  W  W  L  L  L  E  L  D  P  P  A  P  R  Q  G  
                    Query_6368   1    ACCCTGTCCCTCACCTGCACT--CTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGCAAGGGC  88
V  95.2% (236/248)  IGHV4-31*03  49   .....................GT............................................................G......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                      P  G  V  D  W  A  H  L  L  Q  W  E  H  R  L  Q  P  V  P  Q  E  S  S  F  H  I  R  R  H  V  
                    Query_6368   89   CTGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCGACTACAACCCGTCCCTCAAGAGTCGAGTTTTCATATCAGGAGACACGTCT  178
V  95.2% (236/248)  IGHV4-31*03  139  ...............T.......................T.............................AC........T..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                      *  E  P  V  L  P  Q  A  E  L  C  D  C  R  G  H  G  H  L  L  L  C  E  R  P  P  I  N  L  R  
                    Query_6368   179  AAGAACCAGTTCTCCCTCAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCATTTATTACTGTGCGAGCGCCCACCGATTAATCTTCGAT  268
V  95.2% (236/248)  IGHV4-31*03  229  .................G.A...............................G.G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  94.7% (18/19)    IGHD3-22*01  11   ---------------------------------------------------------------------------------------...  13

                                      MGT-------------------->                                  
                                      *  K  W  L  L  L  A  R  L  G  P  G  S  P  G  H  R  L  L   
                    Query_6368   269  AGAAGTGGTTATTACTTGCGCGACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  326
D  94.7% (18/19)    IGHD3-22*01  14   ..T.............------------------------------------------  29
J  97.2% (35/36)    IGHJ4*02     13   ----------------------..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_53904

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_6369   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG..G.T..................................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_6369   91   TGGATTGGATATATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  93.4% (228/244)  IGHV4-59*01  139  ........G...................G.....A............................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W 
                    Query_6369   181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------------------------------------------....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_6369   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (35/35)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_53903

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            410     1e-116
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACATAC	TACTACGATAGTCGTGGTTAT	CGATCGTGGGTCCCCCG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACATACTACTACGATAGTCGTGGTTATCGATCGTGGGTCCCCCGCTTTGACTCC	ARTYYYDSRGYRSWVPRFDS	289	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	294	278	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S 
                    Query_6370   1    CAGGTGCAGCTGGTGCAGTCTGGAGCCGAGGTGAAGAAGCCGGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCAGC  90
V  94.6% (278/294)  IGHV1-8*01   1    .......................G..T..............T..............................................C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  F  M  N  P  N  S  G  N  T  G  S 
                    Query_6370   91   AGTTATGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGCCTTGAGTGGATGGGATTTATGAACCCAAACAGTGGTAACACAGGCTCT  180
V  94.6% (278/294)  IGHV1-8*01   91   ..............................A..........G................GG........T...................A.  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  R  F  Q  G  R  V  T  M  T  R  N  T  S  I  N  T  A  Y  M  E  L  S  S  L  T  S  D  D 
                    Query_6370   181  GCACAGAGGTTCCAGGGCAGAGTCACCATGACCAGAAATACCTCCATAAACACAGCCTACATGGAGCTGAGCAGCCTGACATCTGACGAC  270
V  94.6% (278/294)  IGHV1-8*01   181  .......A...........................G..C..........G.............................G......G...  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  V  Y  Y  C  A  R  T  Y  Y  Y  D  S  R  G  Y  R  S  W  V  P  R  F  D  S  W  G  Q  G 
                    Query_6370   271  ACGGCCGTGTATTACTGTGCGAGAACATACTACTACGATAGTCGTGGTTATCGATCGTGGGTCCCCCGCTTTGACTCCTGGGGCCAGGGA  360
V  94.6% (278/294)  IGHV1-8*01   271  ........................------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  90.5% (19/21)    IGHD3-22*01  5    ------------------------------.....T......A........---------------------------------------  25
J  97.7% (43/44)    IGHJ4*02     5    --------------------------------------------------------------------........A.............  26

                                                            
                                       T  L  V  T  V  S  S  
                    Query_6370   361  ACCCTGGTCACCGTCTCCTCAG  382
J  97.7% (43/44)    IGHJ4*02     27   ......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_53902

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           385     4e-109
IGHD1-26*01                                                                                           10.3    132   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TCAGGCACGAGAA	GGGAG	GCGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGGCACGAGAAGGGAGGCGGGGCGAACGACTAC	VRHEKGGGANDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	284	1	1	0	0	100
Total	N/A	N/A	284	265	19	0	93.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P  N  Y
                    Query_6371   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCCAATTA  90
V  93.3% (265/284)  IGHV5-51*03  6    .............................................................................GC...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  A  D  S  D  T  R  Y  S  L
                    Query_6371   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAACATCTATCCTGCAGACTCTGACACCAGATACAGTCT  180
V  93.3% (265/284)  IGHV5-51*03  96   .....................................................T...........GT........T...........C.C  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  R  K  A  S  D  S  G
                    Query_6371   181  GACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCGGAAGGCCTCGGACAGCGG  270
V  93.3% (265/284)  IGHV5-51*03  186  .T.....C.............................................................C.T..............C..C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6371   271  CGTGTATTATTGTGTCAGGCACGAGAAGGGAGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  351
V  93.3% (265/284)  IGHV5-51*03  276  .A.......C....-------------------------------------------------------------------  289
                                        M  Y  Y  C                                                                     
D  100.0% (5/5)     IGHD1-26*01  9    ---------------------------.....-------------------------------------------------  13
J  97.4% (37/38)    IGHJ4*02     9    -------------------------------------------....................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_125407

Length=252
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           249     2e-68
IGHJ5*02                                                                                              89.1    4e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	N/A	IGHJ5*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCACA	N/A	N/A	N/A	AACTC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	180	11	11	0	0	100
Total	N/A	N/A	179	169	10	0	94.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_6372   2    CAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGTTAC  91
V  94.4% (169/179)  IGHV1-18*04  7    ...................C.............................A....................................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  A  T  N  Y  A  Q 
                    Query_6372   92   GGTATCAACTGGGTGCGCCAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCCCTTATAATGGTGCCACAAACTATGCACAA  181
V  94.4% (169/179)  IGHV1-18*04  97   .......G.........A.................G........................G....C......AA...............-  185
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A    
J  98.0% (48/49)    IGHJ5*02     3    -----------------------------------------------------------------------------------------.  3

                                      --------------FR3-IMGT------------------------->
                                       T  R  S  T  P  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_6372   182  ACTCGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  229
J  98.0% (48/49)    IGHJ5*02     4    ...G............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 23757975


Query= Query_53900

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           452     3e-129
IGHD3-3*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              110     2e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGAG	TTTTTGGAGTGGT	CCAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGTTTTTGGAGTGGTCCAGTACTACTACTACGGTATGGACGTC	ARDRVFGVVQYYYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	290	1	0	99.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_6373   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  99.7% (290/291)  IGHV1-69*01  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q
                    Query_6373   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACA  180
V  99.7% (290/291)  IGHV1-69*01  96   ..........................................................................................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_6373   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  99.7% (290/291)  IGHV1-69*01  186  ..........................................................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  D  R  V  F  G  V  V  Q  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T
                    Query_6373   271  CGTGTATTACTGTGCGAGAGATCGAGTTTTTGGAGTGGTCCAGTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCAC  360
V  99.7% (290/291)  IGHV1-69*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (13/13)   IGHD3-3*01   10   --------------------------.............---------------------------------------------------  22
J  100.0% (57/57)   IGHJ6*02     6    -------------------------------------------...............................................  52

                                                
                                        V  S  S 
                    Query_6373   361  CGTCTCCTCA  370
J  100.0% (57/57)   IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_81556

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           350     8e-99
IGHD4-17*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGAGGGGAT	TACGGTGAC	CGAAAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGGGGATTACGGTGACCGAAATCTACTTTGACTAC	AREGITVTEIYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	233	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  E  Y  F  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_6374   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGAATACTTCTGGAGCTGGATCCGCCAGACCCCAGGGAAGGGGCTGGAG  90
V  96.3% (233/242)  IGHV4-34*01  49   ...........................................GT....A...................C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  D  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_6374   91   TGGATTGGAGAAATCAATGATAGTGGAAGCACCAACTACAACCCGTCCCTCCAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAGC  180
V  96.3% (233/242)  IGHV4-34*01  139  ........G.........C................................A....................................A.  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  I  T  V  T  E  I  Y 
                    Query_6374   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGGGAGGGGATTACGGTGACCGAAATCTAC  270
V  96.3% (233/242)  IGHV4-34*01  229  ...............................................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD4-17*01  5    -----------------------------------------------------------------------.........----------  13
J  100.0% (47/47)   IGHJ4*02     2    --------------------------------------------------------------------------------------....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6374   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (47/47)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_312108

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           383     1e-108
IGHJ3*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GGGGCCTTCAA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCTTCAAGATGCTTTTGATATC	ARGGLQDAFDI	281	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	166	21	16	5	0	76.2
FR3-IMGT	167	280	114	110	4	0	96.5
CDR3-IMGT (germline)	281	287	7	7	0	0	100
Total	N/A	N/A	287	266	21	0	92.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  A  Y
                    Query_6375   1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTTAGGCTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGCGCCTA  90
V  92.7% (266/287)  IGHV3-53*01  6    ..........G.....................................G..A................................TAG.A.  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        F  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  I  M  Y  T  G  G  F  T  Y  Y  A  D  S
                    Query_6375   91   CTTCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTAGAGTGGGTCTCAATTATGTATACCGGTGGATTCACATACTACGCGGACTC  180
V  92.7% (266/287)  IGHV3-53*01  96   ..A.....G...........................G..G............G....T....G......TAG............A.....  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  N  S  N  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V
                    Query_6375   181  CGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAACAACACCCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGT  270
V  92.7% (266/287)  IGHV3-53*01  186  .......................................G.....G............................................  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><-----------CDR3-IMGT----------->                                  
                                        Y  Y  C  A  R  G  G  L  Q  D  A  F  D  I  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_6375   271  CTATTACTGTGCGAGAGGGGGCCTTCAAGATGCTTTTGATATCTGGGGCCAAGGCACAAGGGTCACCGTCTCTTCAG  347
V  92.7% (266/287)  IGHV3-53*01  276  G................------------------------------------------------------------  292
                                        Y  Y  C  A  R                                                              
J  95.9% (47/49)    IGHJ3*02     2    ----------------------------..........................G....T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_251684

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           338     4e-95
IGHD1-1*01                                                                                            10.3    118  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-1*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTA	GCCCCCAACCCCGATGGCA	ACAAC	CTA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGCCCCCAACCCCGATGGCAACAACCTACC	PPTPMATTY	250	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	249	115	108	6	1	93.9
CDR3-IMGT (germline)	250	250	1	1	0	0	100
Total	N/A	N/A	250	235	14	1	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  I  F  S  T  T  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6376   1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCATTTTCAGTACCACCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-15*01  47   .......T...............G............C........A.G.........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  I  D  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_6376   91   AGTGGGTTGGCCGTATTAAAAGCAAAATTGATGGTGAGACAACAGACTACGCTGCACCCGTGAAGGGCAGATTCACCATCTCAAGAGATG  180
V  94.0% (235/250)  IGHV3-15*01  137  ...........................C........G...........................A.........................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT-----------------------------------------------------><----------CDR3-IMGT-
                                      D  S  K  K  H  A  V  F  A  N  E  Q  P  G  N  R  G  H  S  P  L  L  L  *  P  P  T  P  M  A  
                    Query_6376   181  ATTCAAAAAAACACGCTGTATTTGCAAATGAACAGCCTGGAAACCGAGGACACAGCCCTTTACTACTGTAGCCCCCAACCCCGATGGCAA  270
V  94.0% (235/250)  IGHV3-15*01  227  ....-................C.................A.................G.G..T.......--------------------  295
                                      D  S   K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                      
D  100.0% (5/5)     IGHD1-1*01   4    -----------------------------------------------------------------------------------------.  4

                                      -------->                                  
                                      T  T  Y  L  G  P  G  N  P  G  H  R  L  L   
                    Query_6376   271  CAACCTACCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
D  100.0% (5/5)     IGHD1-1*01   5    ....---------------------------------------  8
J  100.0% (36/36)   IGHJ5*02     16   -------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_177635

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           338     5e-95
IGHD4-17*01                                                                                           21.8    0.042
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTCGGA	TGACTTCGGTGACT	TCCGGGGCAG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATTCGGATGACTTCGGTGACTTCCGGGGCAGCTGGTTCGACCCC	VKDSDDFGDFRGSWFDP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  I  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6377   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAATATCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  93.2% (233/250)  IGHV3-64*05  47   ..........................................G..G......T.....................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  G  I  S  G  N  G  H  R  T  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6377   91   AATATGTTTCAGGTATCAGTGGTAATGGGCATAGAACATACTATGGAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  93.2% (233/250)  IGHV3-64*05  137  ............C...T...A........GG...C........C.C............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  M  F  F  L  Q  M  S  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  D  S  D  D  F  G  D  
                    Query_6377   181  AGAACATGTTCTTTCTTCAAATGAGCAGTCTGAGAGCTGAGGACACGGCTCTGTATTACTGTGTGAAAGATTCGGATGACTTCGGTGACT  270
V  93.2% (233/250)  IGHV3-64*05  227  ......C.C.G.A.G...................................G...................--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  92.9% (13/14)    IGHD4-17*01  1    ----------------------------------------------------------------------------.....A........  14

                                      GT-------------------->                                  
                                      F  R  G  S  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6377   271  TCCGGGGCAGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (47/47)   IGHJ5*02     5    ----------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_177637

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     3e-93
IGHD2-21*02                                                                                           31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCGT	GCATTTTGTGGTGATGACTGCT	TCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGTGCATTTTGTGGTGATGACTGCTTCCCCTTTGACTAC	ARRAFCGDDCFPFDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	227	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  F  N  I  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6378   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCTTCAACATTTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.8% (227/242)  IGHV4-59*08  49   ....................................A...GT.G............C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  T  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  S  S  K  N 
                    Query_6378   91   TGGATTGGGTATATCTCTTACAGTGGGACCACCAACTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGTAGACTCGTCCAAGAAT  180
V  93.8% (227/242)  IGHV4-59*08  139  ................A...........G......................A..........................A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  V  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  R  A  F  C  G  D  D  C  F 
                    Query_6378   181  CAGGTCTCCCTGAAACTGACCTCTGTGACCGCCGCAGACACGGCCATATATTACTGTGCGAGGCGTGCATTTTGTGGTGATGACTGCTTC  270
V  93.8% (227/242)  IGHV4-59*08  229  ...T..........G....G.........................G.G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (20/22)    IGHD2-21*02  2    ------------------------------------------------------------------....A........G........--  23

                                      ----------->                                  
                                       P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6378   271  CCCTTTGACTACTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  316
J  97.7% (43/44)    IGHJ4*02     5    --..............................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_177631

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     1e-109
IGHD6-25*01                                                                                           14.1    9.4   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTC	ARQSSAGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	269	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  R  S  S  G  Y  D  F  L  D  Y
                    Query_6379   1    GCAGCTGGTGCAGTCTGGAGCAGAGCTAAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGAGTTCTGGGTACGACTTTCTCGACTA  90
V  92.4% (269/291)  IGHV5-51*01  6    .........................G.G..A.....C.........................A.G.......A...AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_6379   91   CTGGATCGTCTGGGTGCGCCAAATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGTCC  180
V  92.4% (269/291)  IGHV5-51*01  96   ........G............G..........................................................G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  A
                    Query_6379   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGCGCAGTCTGAAGGCCTCGGACACCGC  270
V  92.4% (269/291)  IGHV5-51*01  186  .............................C...............C..................A....C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_6379   271  CAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  360
V  92.4% (269/291)  IGHV5-51*01  276  ..T..................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  100.0% (48/48)   IGHJ6*02     15   -------------------------------------------...............................................  61

                                       
                                       
                    Query_6379   361  A  361
J  100.0% (48/48)   IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_177630

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD3-16*01                                                                                           10.3    117  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAGGTTTCGATA	GGGGG	N/A	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAGGTTTCGATAGGGGGGGTTCGACCCC	ARDRGFDRGGSTP	240	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  G  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_6380   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCGGTAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAGT  93
V  93.0% (227/244)  IGHV4-59*01  50   .....TCC...A....C.....................A......A..............................G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  I  Y  Y  S  G  S  I  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  M  P  K  N  
                    Query_6380   94   GGATTGCGTATATCTATTACAGTGGGAGCATCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACATGCCCAAGAACC  183
V  93.0% (227/244)  IGHV4-59*01  140  ......G.......................C...C.....................................T.....C.T.........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  I  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  G  F  D  R  G  G  S  
                    Query_6380   184  AGATCTCCCTGAAGTTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATAGAGGTTTCGATAGGGGGGGTTCGA  273
V  93.0% (227/244)  IGHV4-59*01  230  ..T...........C................T................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (5/5)     IGHD3-16*01  18   ------------------------------------------------------------------------------.....-------  22
J  100.0% (45/45)   IGHJ5*02     7    -----------------------------------------------------------------------------------.......  13

                                      --->                                  
                                      T  P  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_6380   274  CCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  311
J  100.0% (45/45)   IGHJ5*02     14   ......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_177633

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           346     2e-97
IGHD6-19*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GGGCCCCCG	GCAGTGGCTGGTAC	CGGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGGGGCCCCCGGCAGTGGCTGGTACCGGGTTGACTAC	TTGAPGSGWYRVDY	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	24	6	0	80
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	238	17	0	93.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6381   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTCATGCCTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.3% (238/255)  IGHV3-15*01  47   .......T....................................A.C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  Q  I  D  G  E  T  E  D  Y  A  A  P  V  K  G  R  F  V  I  S  R  D  
                    Query_6381   91   AATGGGTTGGCCGTATTAAAAGTCAAATTGATGGTGAGACAGAAGACTACGCTGCACCCGTGAAAGGCAGATTCGTCATCTCAAGAGATG  180
V  93.3% (238/255)  IGHV3-15*01  137  .G....................CA...C........G....AC...............................AC..............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  I  E  D  T  A  V  Y  Y  C  T  T  G  A  P  G  S  
                    Query_6381   181  ATTCAAAAAACACCCTGTATTTGCAAATGAACAGCCTGAAAATCGAGGACACAGCCGTATATTACTGTACCACAGGGGCCCCCGGCAGTG  270
V  93.3% (238/255)  IGHV3-15*01  227  .............G......C.....................C...............G................---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (14/14)   IGHD6-19*01  8    ------------------------------------------------------------------------------------......  13

                                      IMGT--------------->                                  
                                      G  W  Y  R  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6381   271  GCTGGTACCGGGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (14/14)   IGHD6-19*01  14   ........----------------------------------------------  21
J  100.0% (42/42)   IGHJ4*02     7    ------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_177632

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*03                                                                                           302     3e-84
IGHD2-15*01                                                                                           10.3    127  
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATAGA	TC	AGGAT	GTGAACATACCCGCTGGCCTCCGGCTCCACTTT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATAGATCAGGATGTGAACATACCCGCTGGCCTCCGGCTCCACTTTTACGGTCTGGACGTC	AIDQDVNIPAGLRLHFYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	222	29	0	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  V  S  N  D  D  Y  F  W  S  W  I  R  Q  S  P  G  K  G 
                    Query_6382   1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCGTCAGTAATGATGATTACTTCTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGA  90
V  88.4% (222/251)  IGHV4-61*03  49   ..................A....C.................C.G..G.AG.....A...................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  K  S  G  I  T  K  S  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_6382   91   CTGGAATGGATTGGCTACATCTCCAAAAGTGGGATCACCAAGTCCAACCCCTCCCTCAAGAGTCGAGTCTCCATCTCAGTTGACACGTCC  180
V  88.4% (222/251)  IGHV4-61*03  139  .....G........G..T....ATT.C.......G......C.A.........................A....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       T  N  R  F  S  L  K  L  T  S  V  T  A  V  D  T  A  V  Y  Y  C  A  I  D  Q  D  V  N  I  P 
                    Query_6382   181  ACGAACCGCTTCTCCCTGAAACTGACCTCTGTAACCGCTGTGGACACGGCCGTGTATTACTGTGCGATAGATCAGGATGTGAACATACCC  270
V  88.4% (222/251)  IGHV4-61*03  229  .A.....A............G....G......G.......C..........................G...-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD2-15*01  1    -------------------------------------------------------------------------.....------------  5

                                      CDR3-IMGT-------------------------->                                
                                       A  G  L  R  L  H  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_6382   271  GCTGGCCTCCGGCTCCACTTTTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  338
J  97.9% (46/47)    IGHJ6*02     15   ---------------------......A........................................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_192586

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            366     2e-103
IGHD3-3*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGTAGTCAAG	ACGATTTTTGGAGTGGTT	TGTTCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTAGTCAAGACGATTTTTGGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTC	ARDGSQDDFWSGLFHYYYGMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  P  P  G  K  G  L  
                    Query_6383  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGGTATTGGATGAGTTGGGTCCGCCAACCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-7*03  47   ..............................................C...........C...........GG..................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_6383  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (242/250)  IGHV3-7*03  137  ........................................................A.................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><---------------------------
                                     K  N  S  V  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  Q  D  D  F  
                    Query_6383  181  AGAACTCAGTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAGAGATGGTAGTCAAGACGATTTTT  270
V  96.8% (242/250)  IGHV3-7*03  227  ........C........C..................................G.................--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-3*01  6    ---------------------------------------------------------------------------------.........  14

                                     -CDR3-IMGT--------------------------->                                 
                                     W  S  G  L  F  H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6383  271  GGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  100.0% (18/18)   IGHD3-3*01  15   .........--------------------------------------------------------------  23
J  96.4% (54/56)    IGHJ6*02    7    ---------------.......C..C.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_177639

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           293     2e-81
IGHD1-26*01                                                                                           12.2    35   
IGHJ5*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ5*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCTCTAGTCCATATGAATCCGGGGGTCCCCCCGACAGACGGCGATT	TGGGACCTA	ATAT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCTCTAGTCCATATGAATCCGGGGGTCCCCCCGACAGACGGCGATTTGGGACCTAATATTTCGACTGC	AKVSSPYESGGPPDRRRFGT*YFDC	243	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	218	31	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  K  F  S  N  Y  A  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6384   1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTGGATTCAAGTTTAGCAACTACGCCCTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.6% (218/249)  IGHV3-23*01  47   .....................C..C...........CC.......G...T...A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  D  I  S  S  S  S  I  K  T  D  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6384   91   AATGGGTCGCAGATATTAGTAGTAGTAGTATTAAGACAGACTATGTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCTA  180
V  87.6% (218/249)  IGHV3-23*01  137  .G......T...C.......G.....G..GG..GC...T....C.C..........................................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  M  F  L  R  M  Q  S  L  R  G  D  D  T  A  L  Y  Y  C  A  K  V  S  S  P  Y  E  S  
                    Query_6384   181  AGAACACGATGTTTCTGCGAATGCAGAGCCTGAGAGGCGACGACACAGCCTTATACTACTGTGCGAAAGTCTCTAGTCCATATGAATCCG  270
V  87.6% (218/249)  IGHV3-23*01  227  ........C...A.....A....A.C..........C...G.....G...G....T.............---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -----CDR3-IMGT-------------------------------->                                  
                                      G  G  P  P  D  R  R  R  F  G  T  *  Y  F  D  C  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_6384   271  GGGGTCCCCCCGACAGACGGCGATTTGGGACCTAATATTTCGACTGCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  351
D  88.9% (8/9)      IGHD1-26*01  8    -------------------------.....G...-----------------------------------------------  16
J  93.0% (40/43)    IGHJ5*01     9    --------------------------------------.......C.........A...A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_177638

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           313     1e-87
IGHD6-25*01                                                                                           12.2    31   
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-25*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGGG	GCATCGGCT	GAGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGGGCATCGGCTGAGGGGTGGTTCGACCCC	AGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  L  S  D  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6385   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGGTTCATGTTGAGTGATTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.0% (222/244)  IGHV3-33*03  47   ...............................A....CC..C...AGC.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  K  K  Y  Y  V  D  S  V  K  D  R  F  T  I  S  R  D  D  S  
                    Query_6385   91   AGTGGGTGGCAGTTATATGGTATGACGGAATTAAAAAATACTATGTAGACTCCGTGAAGGACCGATTCACCATCTCCAGAGACGACTCCA  180
V  91.0% (222/244)  IGHV3-33*03  137  .........................T....G...T..........C..............G......................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  V  D  D  T  A  L  Y  Y  C  A  G  A  S  A  E  G  W  F  
                    Query_6385   181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGTCGACGACACGGCTCTTTATTATTGTGCAGGGGCATCGGCTGAGGGGTGGTTCG  270
V  91.0% (222/244)  IGHV3-33*03  227  .......G....A......A................C...G.........G.G.....C.....--------------------------  290
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  88.9% (8/9)      IGHD6-25*01  8    --------------------------------------------------------------------...G.....-------------  16
J  97.8% (45/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_6385   271  ACCCCTGGGGCCAGGGAACCGTGGTCACCGTCTCCTCAG  309
J  97.8% (45/46)    IGHJ5*02     13   ....................C..................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_133667

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-13*01                                                                                           302     3e-84
IGHD3-22*01                                                                                           14.1    8.9  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-13*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	CAGCCGAAGTCAGGGGGCAGCCGGCGAATGGGATT	TTATTAC	CAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGACAGCCGAAGTCAGGGGGCAGCCGGCGAATGGGATTTTATTACCATTACGGTATGGACGTC	ARQPKSGGSRRMGFYYHYGMDV	240	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	245	219	26	0	89.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  F  G  F  P  F  S  G  Y  D  M  H  W  V  R  Q  A  A  G  S  G  L  
                    Query_6386   1    GGTCCCTGAGACTCTCCTGTACAGCCTTTGGATTCCCCTTCAGTGGCTACGACATGCACTGGGTCCGCCAAGCTGCAGGAAGTGGGCTGG  90
V  89.4% (219/245)  IGHV3-13*01  47   ....................G......C.......A........A.............................A......AA..T....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  D  M  H  W  V  R  Q  A  T  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  G  I  D  T  T  G  E  T  F  Y  L  G  S  V  K  G  R  F  T  I  S  R  D  D  A  K  
                    Query_6386   91   AGTGGGTCTCAGGGATTGATACTACTGGTGAGACGTTCTATTTAGGCTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACGATGCCAAGA  180
V  89.4% (219/245)  IGHV3-13*01  137  ............CT....G....G.......C..A.A....CC..................A.................AA.........  226
                                      E  W  V  S  A  I  G  T  A  G  D  T  Y  Y  P  G  S  V  K  G  R  F  T  I  S  R  E  N  A  K  

                                      3-IMGT----------------------------------------------------><----------------------------CD
                                      N  S  M  Y  L  Q  M  N  S  L  T  A  G  D  T  A  V  Y  F  C  A  R  Q  P  K  S  G  G  S  R  
                    Query_6386   181  ACTCCATGTATCTGCAAATGAACTCCCTGACAGCCGGGGACACGGCTGTGTATTTCTGTGCAAGACAGCCGAAGTCAGGGGGCAGCCGGC  270
V  89.4% (219/245)  IGHV3-13*01  227  .....T.......T.........AG.....G.......................A..........-------------------------  291
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R                          

                                      R3-IMGT--------------------------->                                 
                                      R  M  G  F  Y  Y  H  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6386   271  GAATGGGATTTTATTACCATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  338
D  100.0% (7/7)     IGHD3-22*01  22   ----------.......---------------------------------------------------  28
J  100.0% (48/48)   IGHJ6*02     15   --------------------................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_133665

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           364     5e-103
IGHD2-2*01                                                                                            10.3    125   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGGA	N/A	CCAGC	GCTGGCGACAATC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGACCAGCGCTGGCGACAATCACTACTTTGACTCC	ARTSAGDNHYFDS	263	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	29	1	0	96.7
FR2-IMGT	77	127	51	49	2	0	96.1
CDR2-IMGT	128	148	21	17	4	0	81
FR3-IMGT	149	262	114	103	11	0	90.4
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	269	251	18	0	93.3


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  T  T  S  G  M  C  V  T  W  I  R
                    Query_6387   1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCACCACTAGTGGAATGTGTGTGACCTGGATCCG  90
V  93.3% (251/269)  IGHV2-70*01  30   ...........................................................G....................G.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  P  I  T  W  D  D  E  R  T  Y  N  T  S  L  Q  T  R  L  T
                    Query_6387   91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACCCATTACTTGGGATGATGAGAGAACGTACAACACATCTCTGCAGACCAGGCTCAC  180
V  93.3% (251/269)  IGHV2-70*01  120  ...................................T....GA............T.A.TAC....G..........A.............  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        V  S  K  D  S  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  V  T  Y  Y  C  A  R  T
                    Query_6387   181  CGTCTCTAAGGACAGCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGTCACCTACTACTGTGCACGGAC  270
V  93.3% (251/269)  IGHV2-70*01  210  .A....C.......C.....................................................C...G..T.............-  298
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   
D  100.0% (5/5)     IGHD2-2*01   18   -----------------------------------------------------------------------------------------.  18

                                      -------CDR3-IMGT-------------->                                  
                                        S  A  G  D  N  H  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6387   271  CAGCGCTGGCGACAATCACTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  335
D  100.0% (5/5)     IGHD2-2*01   19   ....-------------------------------------------------------------  22
J  97.9% (47/48)    IGHJ4*02     1    -----------------............A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_133663

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD2-21*01                                                                                           18.0    0.68  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	G	ATTGCGGTGGTG	TAGTGATGGAACTTGTTACTCTGGTTCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTAT	ARRLRWCSDGTCYSGSFEY	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  K  F  T  S  Y
                    Query_6388   1    GCAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCCGGAGAGTCCCTGAAGATCTCCTGTAAGGGTTCTGGATACAAGTTTACCAGCTA  90
V  93.4% (271/290)  IGHV5-51*01  6    .....................A........A........G.....T...............................GC...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  F  P  R  D  S  D  T  R  Y  N  P
                    Query_6388   91   TTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTCGTGACTCCGATACCAGATATAACCC  180
V  93.4% (271/290)  IGHV5-51*01  96   C......................T...........................G.......A....G.......T...........C.G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  D  R  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  D  S  L  K  A  S  D  T  A
                    Query_6388   181  GTCCTTCCAAGACCGGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTACCTGCAGTGGGACAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (271/290)  IGHV5-51*01  186  ...........G..A....................A............................AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  R  L  R  W  C  S  D  G  T  C  Y  S  G  S  F  E  Y  W  G  Q  G  T  L  V
                    Query_6388   271  CATGTATTACTGTGCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTATTGGGGCCAGGGAACCCTGGT  360
V  93.4% (271/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD2-21*01  6    ---------------------....T.......---------------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------------------------.....C..C....................  34

                                                    
                                        T  V  S  S  
                    Query_6388   361  CACCGTCTCCTCAG  374
J  95.3% (41/43)    IGHJ4*02     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_133660

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6389   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_6389   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_6389   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6389   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_133661

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AATATGGAACCCCCTGGGCAAAGTGA	TGGCTGGT	TT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAATATGGAACCCCCTGGGCAAAGTGATGGCTGGTTTTACTTTGACCAC	AKNMEPPGQSDGWFYFDH	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  V  S  W  V  R  L  A  P  G  K  G  L  
                    Query_6390   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCGTGAGCTGGGTCCGTCTGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (230/248)  IGHV3-23*01  47   .....................................................A.............C.A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  L  G  G  R  N  T  Y  Y  A  D  F  V  E  G  R  F  T  I  S  R  D  N  S  
                    Query_6390   91   AGTGGGTCGCATCTATTAGTCTGGGTGGTCGTAACACATACTACGCAGACTTCGTGGAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.7% (230/248)  IGHV3-23*01  137  ........T..G........GGTA.....G...G.................C....A.................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  N  T  L  S  L  Q  M  N  S  L  R  T  E  D  T  A  V  Y  Y  C  A  K  N  M  E  P  P  G  Q  
                    Query_6390   181  GAAACACGCTGTCTCTGCAAATGAACAGCCTGAGAACCGAGGACACGGCCGTCTATTACTGTGCGAAAAATATGGAACCCCCTGGGCAAA  270
V  92.7% (230/248)  IGHV3-23*01  227  AG..........A......................G................A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      IMGT--------------------->                                  
                                      S  D  G  W  F  Y  F  D  H  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_6390   271  GTGATGGCTGGTTTTACTTTGACCACTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  330
D  100.0% (8/8)     IGHD6-19*01  12   ----........------------------------------------------------  19
J  95.7% (44/46)    IGHJ4*02     3    --------------.........T....................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_133668

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           352     3e-99
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAT	TTACTTGGATAGCAGTGGT	AATCCTCAGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAATTTACTTGGATAGCAGTGGTAATCCTCAGGACGGTATGGACGTC	AREIYLDSSGNPQDGMDV	242	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	28	28	0	0	100
CDR1-IMGT	29	52	24	21	3	0	87.5
FR2-IMGT	53	103	51	51	0	0	100
CDR2-IMGT	104	127	24	18	6	0	75
FR3-IMGT	128	241	114	111	3	0	97.4
CDR3-IMGT (germline)	242	249	8	8	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E
                    Query_6391   1    GTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGA  90
V  95.2% (237/249)  IGHV3-21*01  48   ....................................C......AG.............................................  137
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E

                                      ------------><-------CDR2-IMGT------><----------------------------------------------------
                                        W  V  S  S  I  S  N  D  N  A  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K
                    Query_6391   91   GTGGGTCTCATCCATTAGTAATGATAATGCTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAA  180
V  95.2% (237/249)  IGHV3-21*01  138  ....................G.AG..G.AG............................................................  227
                                        W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K

                                      FR3-IMGT----------------------------------------------------><----------------------CDR3-I
                                        N  S  L  Y  L  R  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  I  Y  L  D  S  S  G
                    Query_6391   181  GAACTCACTGTATCTGCGAATGAACAGCCTGAGAGCCGACGACACGGCTGTTTATTACTGTGCGAGAGAAATTTACTTGGATAGCAGTGG  270
V  95.2% (237/249)  IGHV3-21*01  228  .................A.....................G...........G.................---------------------  296
                                        N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                        
D  84.2% (16/19)    IGHD3-22*01  4    ------------------------------------------------------------------------.....AT.....T.....  21

                                      MGT--------------------->                                 
                                        N  P  Q  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6391   271  TAATCCTCAGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  328
D  84.2% (16/19)    IGHD3-22*01  22   .---------------------------------------------------------  22
J  100.0% (47/47)   IGHJ6*02     16   -----------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_133669

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           400     9e-114
IGHD3-22*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCGA	ATAGGAGTGG	GTAATTCGGGGCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGAATAGGAGTGGGTAATTCGGGGCCCTACTTTGACTAC	ARRIGVGNSGPYFDY	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	73	1	0	98.6
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	102	12	0	89.5
CDR3-IMGT (germline)	291	295	5	5	0	0	100
Total	N/A	N/A	292	274	18	0	93.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  
                    Query_6392   4    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCA  93
V  93.8% (274/292)  IGHV5-51*03  2    ....G............................................................................G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  
                    Query_6392   94   GCTACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACA  183
V  93.8% (274/292)  IGHV5-51*03  92   ............G.......................A...................................A....G.....A......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  R  L  A  A  P  D  
                    Query_6392   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCCGCCTGGCGGCCCCGGACC  273
V  93.8% (274/292)  IGHV5-51*03  182  .................................................C...........G.........A.....AA....T.....A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      P  A  R  Y  F  C  A  R  R  I  G  V  G  N  S  G  P  Y  F  D  Y  L  G  P  G  T  L  V  T  V  
                    Query_6392   274  CCGCCCGCTATTTCTGTGCGAGGCGAATAGGAGTGGGTAATTCGGGGCCCTACTTTGACTACTTGGGCCCGGGAACCCTGGTCACCGTCT  363
V  93.8% (274/292)  IGHV5-51*03  272  .....ATG....A.........--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  90.0% (9/10)     IGHD3-22*01  12   --------------------------....T.....------------------------------------------------------  21
J  95.7% (45/47)    IGHJ4*02     2    -------------------------------------------------..............G.....A....................  42

                                            
                                      S  S  
                    Query_6392   364  CCTCAG  369
J  95.7% (45/47)    IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_254703

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAGGGAGT	AGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCC	ARAGSSGWLDS	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  D  Y  W  S  W  I  R  K  P  P  G  K  G  L  E 
                    Query_6393   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATAACTAGTGACTACTGGAGCTGGATCCGGAAGCCCCCTGGGAAGGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*01  49   .............................T........C.G....T....................C.......A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  D  Y  N  S  S  L  K  S  R  V  T  I  S  F  D  R  S  K  N 
                    Query_6393   91   TGGATTGGATATATCTATTACAGTGGGAGCACCGACTACAATTCCTCCCTCAAGAGTCGAGTCACCATATCATTTGACAGGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*01  139  ........G........................A.......CC.............................G.A....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  S  S  G  W  L  D  S 
                    Query_6393   181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCC  270
V  93.0% (227/244)  IGHV4-59*01  229  ...............C....C..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-19*01  10   ------------------------------------------------------------------------.........---------  18
J  97.5% (39/40)    IGHJ4*02     7    ----------------------------------------------------------------------------------......A.  14

                                                                      
                                       W  G  Q  G  T  L  V  T  V  S  S
                    Query_6393   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  302
J  97.5% (39/40)    IGHJ4*02     15   ................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_3669

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  N  N  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6394   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTTAACAACCATGCCCTGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-23*01  47   ...................................A......G..G.T.....A....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  T  
                    Query_6394   91   AGTGGGTCTCAGCGATTACTGGGAGTGGTAGTAGTACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTACACCA  180
V  92.0% (230/250)  IGHV3-23*01  137  .............T....G...T......G....C.........G......................................A.TT...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  L  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_6394   181  AGAACACGCTGTATCTGCTAATGAACAGCCTTACAGCCGAGGACACGGCCGTCTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  92.0% (230/250)  IGHV3-23*01  227  ..................A............G.G..................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6394   271  ATTCACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_14120

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           268     6e-74
IGHD2-2*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCTAAATGGATTCTCG	ATTGTGCTACTACCGGTTGCTAT	CTG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCTAAATGGATTCTCGATTGTGCTACTACCGGTTGCTATCTGGACTAC	ARDPKWILDCATTGCYLDY	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	18	8	0	69.2
CDR1-IMGT	28	51	24	14	10	0	58.3
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	126	24	18	6	0	75
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	247	209	38	0	84.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  V  Y  G  G  S  F  R  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_6395   2    CCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCGTTCAGAGGTTACTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  91
V  84.6% (209/247)  IGHV3-11*01  50   .....AGA...T....T..A.C..C...ATTCA.C.....T.AC....A.AT..G.............G.T...................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  I  S  R  I  T  P  S  G  S  A  I  D  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  K  
                    Query_6395   92   GGATTTCAAGGATCACTCCTAGTGGCAGTGCCATAGACTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGGGACAACGCCAAGA  181
V  84.6% (209/247)  IGHV3-11*01  140  ..G.....TAC..T.G.AG......T...A.....T..................A...................................  229
                                      W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><-----------------------CDR3-IM
                                      N  L  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  P  K  W  I  L  D  C  
                    Query_6395   182  ACTTACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATATTACTGTGCGAGAGACCCTAAATGGATTCTCGATTGTG  271
V  84.6% (209/247)  IGHV3-11*01  230  ...C...........................................G.G.................-----------------------  296
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  78.3% (18/23)    IGHD2-2*01   6    ------------------------------------------------------------------------------------.....A  11

                                      GT----------------------->                                  
                                      A  T  T  G  C  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6395   272  CTACTACCGGTTGCTATCTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  78.3% (18/23)    IGHD2-2*01   12   G..G....A.C......-------------------------------------------  28
J  100.0% (40/40)   IGHJ4*02     9    --------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_254700

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*02                                                                                            391     6e-111
IGHD5-18*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*02	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCAG	GGCCGAGGC	TGGATACAACTTTGGT	ACTCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGCAGGGCCGAGGCTGGATACAACTTTGGTACTCCCTTTGGCTCC	ARRAEAGYNFGTPFGS	263	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	45	1	0	97.8
CDR1-IMGT	47	76	30	30	0	0	100
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	148	21	20	1	0	95.2
FR3-IMGT	149	262	114	110	4	0	96.5
CDR3-IMGT (germline)	263	270	8	7	1	0	87.5
Total	N/A	N/A	270	260	10	0	96.3


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  L  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R
                    Query_6396   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCCTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCG  90
V  96.3% (260/270)  IGHV2-5*02   30   ........................................T.................................................  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        R  P  P  G  R  A  L  E  W  L  A  L  L  Y  W  D  D  D  K  R  Y  N  P  S  L  K  S  R  L  T
                    Query_6396   91   TCGGCCCCCCGGAAGGGCCCTGGAGTGGCTTGCACTCCTTTATTGGGATGATGATAAGCGCTACAATCCATCTCTGAAGAGCAGGCTCAC  180
V  96.3% (260/270)  IGHV2-5*02   120  ..A......A....A......................A...........................GC.......................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        L  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  N  P  V  D  T  A  T  Y  Y  C  A  R  R
                    Query_6396   181  CCTCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGAACCCTGTGGACACAGCCACATATTACTGTGCACGCAG  270
V  96.3% (260/270)  IGHV2-5*02   210  .A..................................................G.................................A...  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                      ------------CDR3-IMGT------------------>                                 
                                        A  E  A  G  Y  N  F  G  T  P  F  G  S  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_6396   271  GGCCGAGGCTGGATACAACTTTGGTACTCCCTTTGGCTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  343
D  87.5% (14/16)    IGHD5-18*01  2    ---------........G..A....------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     5    ------------------------------.....A..A..................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_254707

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           403     1e-114
IGHD2-15*01                                                                                           21.8    0.047 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGTTTTTC	GGATATTGTAG	GGATGGAAATTGTTACGCACTGGAGTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGTTTTTCGGATATTGTAGGGATGGAAATTGTTACGCACTGGAGTAT	ARDRFFGYCRDGNCYALEY	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  T  F  T  S  Y 
                    Query_6397   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACCTCTGGTTACACCTTTACCAGTTAC  91
V  94.5% (274/290)  IGHV1-18*04  7    ............................A..................................G.T....................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  L  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  T  Y  N  G  N  T  N  Y  A  Q 
                    Query_6397   92   GGTCTCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCGGCACTTACAATGGGAACACAAACTATGCACAG  181
V  94.5% (274/290)  IGHV1-18*04  97   ...A...G.................................................A..G..........T..................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  L  E  L  R  S  L  R  S  D  D  T  A 
                    Query_6397   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGATACATCCACGAGAACAGCGTACTTGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.5% (274/290)  IGHV1-18*04  187  ...C............................C...........C.....C...A...................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       L  Y  Y  C  A  R  D  R  F  F  G  Y  C  R  D  G  N  C  Y  A  L  E  Y  W  G  Q  G  T  L  V 
                    Query_6397   272  CTATATTACTGTGCGAGAGATAGGTTTTTCGGATATTGTAGGGATGGAAATTGTTACGCACTGGAGTATTGGGGCCAGGGAACCCTGGTC  361
V  94.5% (274/290)  IGHV1-18*04  277  G.G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (11/11)   IGHD2-15*01  2    ------------------------------...........-------------------------------------------------  12
J  100.0% (34/34)   IGHJ4*02     15   ---------------------------------------------------------------------.....................  35

                                                   
                                       T  V  S  S  
                    Query_6397   362  ACCGTCTCCTCAG  374
J  100.0% (34/34)   IGHJ4*02     36   .............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_254706

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           380     1e-107
IGHD3-16*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACAAGCGGGCGGCACC	TTTGGGG	CGAGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTAC	ARGQAGGTFGASDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  S  F  N  D  Y 
                    Query_6398   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAATGAAGGTCTCCTGCAAGGCTTCCGGTTACAGCTTTAACGACTAT  91
V  92.0% (266/289)  IGHV1-18*01  7    .............................................G......................T.......C.....C.AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  M  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  A  Y  N  G  N  T  K  Y  S  E 
                    Query_6398   92   GGTATCACTTGGATGCGACAGGCCCCTGGACAGGGGCCTGAGTGGATGGGATGGATCAGCGCATATAATGGTAACACAAAGTATTCAGAG  181
V  92.0% (266/289)  IGHV1-18*01  97   .......GC...G...................A....T........................T..C..............C...G..C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  L  Q  G  R  L  I  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_6398   182  AGGCTCCAGGGCAGACTCATCATGACCACAGACACATCCACGAGCACAGCCTACATGGAATTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.0% (266/289)  IGHV1-18*01  187  .A.............G...C.......................................GC.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  G  Q  A  G  G  T  F  G  A  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6398   272  GTCTATTATTGTGCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  92.0% (266/289)  IGHV1-18*01  277  ..G.....C..........---------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD3-16*01  15   ------------------------------------.......---------------------------------------------  21
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_254705

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           433     1e-123
IGHD1-26*01                                                                                           10.3    139   
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AACCTCAGTCCCCTC	TGGGA	AAG	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACCTCAGTCCCCTCTGGGAAAGATTACTACTACTACTACGGTTTGGGCGTC	ATSVPSGKDYYYYYGLGV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	281	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  N  F  T  S  Y
                    Query_6399   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAACTTTACCAGCTA  90
V  98.6% (281/285)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_6399   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGCATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.6% (281/285)  IGHV5-51*03  96   ...................................................G......................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_6399   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  98.6% (281/285)  IGHV5-51*03  186  .........................................................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        L  Y  Y  C  A  T  S  V  P  S  G  K  D  Y  Y  Y  Y  Y  G  L  G  V  W  G  P  G  T  T  V  T
                    Query_6399   271  CCTGTATTACTGTGCAACCTCAGTCCCCTCTGGGAAAGATTACTACTACTACTACGGTTTGGGCGTCTGGGGCCCAGGGACCACGGTCAC  360
V  98.6% (281/285)  IGHV5-51*03  276  .A.............---------------------------------------------------------------------------  290
                                        M  Y  Y  C  A                                                                           
D  100.0% (5/5)     IGHD1-26*01  8    ------------------------------.....-------------------------------------------------------  12
J  95.2% (59/62)    IGHJ6*02     1    --------------------------------------....................A...A...........A...............  52

                                                
                                        V  S  S 
                    Query_6399   361  CGTCTCCTCA  370
J  95.2% (59/62)    IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_312101

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           335     4e-94
IGHD5-18*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GTTGA	ATACAGCTGTGGTTAC	GCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGTTGAATACAGCTGTGGTTACGCCTTTTGACGAC	AKELNTAVVTPFDD	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6400   1    GGTCCCTGAGACTCTCCTGTGTAGCGTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-30*18  47   .....................C...C....................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  F  A  G  D  Y  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_6400   91   AGTGGGTGGCAGTTATATCTTTTGCTGGGGATTATAAGTATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGGGACGATTCCA  180
V  92.8% (232/250)  IGHV3-30*18  137  ...................A.A..A...AAG.A....A..C......................................A...A......  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      T  N  T  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  E  L  N  T  A  V  V  
                    Query_6400   181  CGAACACGCTGTTTCTGCAAATGAACAGCCTGAGAGTTGAGGACACGGCTGTCTATTACTGTGCGAAAGAGTTGAATACAGCTGTGGTTA  270
V  92.8% (232/250)  IGHV3-30*18  227  A...........A.......................C...............G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD5-18*01  5    ---------------------------------------------------------------------------........A......  19

                                      ------------->                                  
                                      T  P  F  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6400   271  CGCCTTTTGACGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  93.8% (15/16)    IGHD5-18*01  20   .-----------------------------------------------  20
J  97.7% (42/43)    IGHJ4*02     6    -----......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_3660

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70D*04                                                                                          400     9e-114
IGHD1-26*01                                                                                           21.8    0.044 
IGHJ4*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70D*04	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACGG	GCCCCCGGGGGCCTA	ATAGTGGGAGC	CACGGT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGGCCCCCGGGGGCCTAATAGTGGGAGCCACGGTCTACTTTGACTAC	ARAPGGLIVGATVYFDY	263	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	30	0	0	100
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	111	3	0	97.4
CDR3-IMGT (germline)	263	268	6	6	0	0	100
Total	N/A	N/A	268	262	6	0	97.8


Alignments

                                       <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                         L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  R  V  T  W  I  R
                    Query_6401    1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAATGCGTGTGACTTGGATCCG  90
V  97.8% (262/268)  IGHV2-70D*04  30   ................................................................................GC........  119
                                         L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  R  V  S  W  I  R

                                       -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                         Q  P  P  G  K  A  L  E  W  L  A  H  I  D  W  D  D  D  K  F  Y  S  T  S  L  K  T  R  L  T
                    Query_6401    91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACACATTGATTGGGATGATGATAAATTCTACAGCACGTCTCTGAAGACCAGGCTCAC  180
V  97.8% (262/268)  IGHV2-70D*04  120  ...................................G.................................A....................  209
                                         Q  P  P  G  K  A  L  E  W  L  A  R  I  D  W  D  D  D  K  F  Y  S  T  S  L  K  T  R  L  T

                                       ---------------------FR3-IMGT----------------------------------------------------><-------
                                         I  S  Q  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  A
                    Query_6401    181  CATCTCCCAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACGGGC  270
V  97.8% (262/268)  IGHV2-70D*04  210  .......A................................................................G...............--  297
                                         I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                       -------------CDR3-IMGT-------------------->                                  
                                         P  G  G  L  I  V  G  A  T  V  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6401    271  CCCCGGGGGCCTAATAGTGGGAGCCACGGTCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  347
D  100.0% (11/11)   IGHD1-26*01   4    -------------...........-----------------------------------------------------  14
J  100.0% (47/47)   IGHJ4*02      2    ------------------------------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_324634

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_6402   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  98.3% (284/289)  IGHV5-51*03  6    ..............................................................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_6402   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ...................................................G............................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6402   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6402   271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  98.3% (284/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_3662

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           355     3e-100
IGHD1-7*01                                                                                            12.2    33    
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGCGAGGA	TGGAAGTAC	GACGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGCGAGGATGGAAGTACGACGGCTACTTCTACGGTATGGACGTC	ARDPRGWKYDGYFYGMDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	239	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6403   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.2% (239/251)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_6403   91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCAGCATTTCAGTAGACACGTCC  180
V  95.2% (239/251)  IGHV4-31*03  139  ................A.................G.................................T.C...A..............T  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  R  G  W  K  Y 
                    Query_6403   181  AAGAATCAGTTCTCCCTGAAGCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCCGCGAGGATGGAAGTAC  270
V  95.2% (239/251)  IGHV4-31*03  229  .....C.................G.G.........T..C................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (8/9)      IGHD1-7*01   9    ---------------------------------------------------------------------------------.....C...  17

                                      -IMGT--------------------->                                 
                                       D  G  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6403   271  GACGGCTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
J  98.2% (54/55)    IGHJ6*02     8    -----.....A.................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_3663

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            444     7e-127
IGHD2-15*01                                                                                           19.9    0.18  
IGHJ5*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTATCGATATATAGGGA	TGGTAGCTGC	GACACGGCAGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTATCGATATATAGGGATGGTAGCTGCGACACGGCAGGACTGGTTCGACCCC	ARGYRYIGMVAATRQDWFDP	290	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	113	1	0	99.1
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	294	289	5	0	98.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  
                    Query_6404   3    AGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCG  92
V  98.3% (289/294)  IGHV1-2*04   2    ....G........G........G...................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  
                    Query_6404   93   ACTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATG  182
V  98.3% (289/294)  IGHV1-2*04   92   G.........................................................................................  181
                                      G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  
                    Query_6404   183  CACAGAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACA  272
V  98.3% (289/294)  IGHV1-2*04   182  ..........................................................................................  271
                                      A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  

                                      ----------------><-------------------------CDR3-IMGT------------------------>             
                                      T  A  V  Y  Y  C  A  R  G  Y  R  Y  I  G  M  V  A  A  T  R  Q  D  W  F  D  P  W  G  Q  G  
                    Query_6404   273  CGGCCGTGTATTATTGTGCGAGAGGTTATCGATATATAGGGATGGTAGCTGCGACACGGCAGGACTGGTTCGACCCCTGGGGCCAGGGAA  362
V  98.3% (289/294)  IGHV1-2*04   272  .............C..........------------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD2-15*01  16   ------------------------------------------..........--------------------------------------  25
J  100.0% (48/48)   IGHJ5*02     4    ---------------------------------------------------------------...........................  30

                                                           
                                      T  L  V  T  V  S  S  
                    Query_6404   363  CCCTGGTCACCGTCTCCTCAG  383
J  100.0% (48/48)   IGHJ5*02     31   .....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_326233

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            308     4e-86
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCATCTTTCAA	CAGCAGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCATCTTTCAACAGCAGGTACTCGGGGTTTTGACTAC	ASHLSTAGTRGFDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	221	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  V  G  S  I  T  S  A  N  W  W  S  W  V  R  Q  P  P  G  R  G  L 
                    Query_6405   1    ACCCTGTCCCTCACCTGCGATGTCTCTGTTGGCTCCATCACCAGTGCTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAGGGGACTG  90
V  90.2% (221/245)  IGHV4-4*01   49   ...................C........G...........G....AG...................................A...G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  K  S  N  Y  S  P  S  L  R  G  R  V  T  I  S  V  D  K  S  M 
                    Query_6405   91   GAGTGGATTGGGGAAATCTATCATGGTGGGAAGTCCAACTACAGTCCGTCCCTCAGGGGTCGCGTCACCATTTCAGTGGACAAGTCCATG  180
V  90.2% (221/245)  IGHV4-4*01   139  ........................A......GCA.........AC..........A.A....A........A.....A..........A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  S  H  L  S  T  A  G  T  R 
                    Query_6405   181  AACCAGTTCTCCCTGAAGCTGAATTCTGTGACCGCCGCGGACACGGCCGTATACTTCTGTGCGAGCCATCTTTCAACAGCAGGTACTCGG  270
V  90.2% (221/245)  IGHV4-4*01   229  ......................GC..........................G..T.G.........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  90.0% (9/10)     IGHD6-13*01  12   ----------------------------------------------------------------------------....T.....----  21

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_6405   271  GGTTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02     6    ---.....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_3667

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           422     2e-120
IGHD1-26*01                                                                                           10.3    139   
IGHJ5*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	GGAGC	ACATCAATGCCTCGGACGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGATCGGAGCACATCAATGCCTCGGACGGACTGGTGCGACACC	GRDRSTSMPRTDWCDT	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	74	1	0	98.7
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	296	8	7	1	0	87.5
Total	N/A	N/A	296	283	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  A  F  T 
                    Query_6406   1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACGCGTTTACC  90
V  95.6% (283/296)  IGHV1-18*01  1    .....T...........................................................................A.C......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  T  Y  N  G  D  T  N  Y 
                    Query_6406   91   AGTTATGGTATCAGCTGGGTGCGCCAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCACTTACAATGGTGACACAAACTAT  180
V  95.6% (283/296)  IGHV1-18*01  91   ..C....................A................................A.........G...........A...........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  E  V  R  S  L  R  S  D  D 
                    Query_6406   181  GCACAGAAGTTCCAGGGCAGAGTCACCCTGACCACAGACACATCCACGAGCACAGCCTACATGGAGGTGAGGAGCCTGAGATCTGACGAC  270
V  95.6% (283/296)  IGHV1-18*01  181  .........C.................A......................................C.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  G  R  D  R  S  T  S  M  P  R  T  D  W  C  D  T  W  G  E  G  T  L  V  T 
                    Query_6406   271  ACGGCCGTGTATTATTGTGGGAGAGATCGGAGCACATCAATGCCTCGGACGGACTGGTGCGACACCTGGGGCGAGGGAACCCTGGTCACC  360
V  95.6% (283/296)  IGHV1-18*01  271  ..............C....C......----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD1-26*01  10   ----------------------------.....---------------------------------------------------------  14
J  93.6% (44/47)    IGHJ5*02     4    ----------------------------------------------------......T....C........C.................  41

                                               
                                       V  S  S 
                    Query_6406   361  GTCTCCTCA  369
J  93.6% (44/47)    IGHJ5*02     42   .........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_100816

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD5-18*01                                                                                           18.0    0.56  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATAGT	TATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATAGTTATGGTTACGGAGGAGTTGACTAC	ARYSYGYGGVDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	114	0	0	100
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	235	7	0	97.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  V  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_6407   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGTCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  97.1% (235/242)  IGHV4-59*01  50   .....TCC...A..................G...........................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  N  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_6407   94   GGATTGGGTATATCTACAACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  97.1% (235/242)  IGHV4-59*01  140  ................TT........................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  Y  G  Y  G  G  V  D  
                    Query_6407   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATATAGTTATGGTTACGGAGGAGTTGACT  273
V  97.1% (235/242)  IGHV4-59*01  230  ..............................................................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (9/9)     IGHD5-18*01  12   --------------------------------------------------------------------.........-------------  20
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------------------------------------------......  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6407   274  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (42/42)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_100815

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           347     7e-98
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CATTTC	TATTACTATGATACTAGTGGTT	CTTCAGGTGGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATTTCTATTACTATGATACTAGTGGTTCTTCAGGTGGCGACTAC	AKHFYYYDTSGSSGGDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  A  M  S  W  V  R  Q  A  T  G  K  G  L  
                    Query_6408   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGGAGCTATGCCATGAGCTGGGTCCGCCAGGCTACAGGGAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-23*01  47   ...........................................C..............................C...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  D  I  S  D  N  A  A  H  T  Y  Y  A  E  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_6408   91   AGTGGGTCTCAGATATTAGTGATAATGCTGCTCATACATACTACGCAGAGTCCGTGAGGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (235/248)  IGHV3-23*01  137  ............C........G..G..G..G.AGC..............C.......A................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  H  F  Y  Y  Y  D  T  
                    Query_6408   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAAACATTTCTATTACTATGATACTA  270
V  94.8% (235/248)  IGHV3-23*01  227  ........................................G...........................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.5% (21/22)    IGHD3-22*01  2    --------------------------------------------------------------------------.............G..  17

                                      GT-------------------->                                  
                                      S  G  S  S  G  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6408   271  GTGGTTCTTCAGGTGGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.5% (21/22)    IGHD3-22*01  18   ......---------------------------------------------------  23
J  100.0% (40/40)   IGHJ4*02     9    -----------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_92305

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           347     7e-98
IGHD6-6*01                                                                                            12.2    31   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	T	AGCGCGTCC	GGTCGAGTTTTA	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATAGCGCGTCCGGTCGAGTTTTAGACGTC	ARDSASGRVLDV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  D  A  S  G  F  T  F  S  S  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6409   1    GGTCCCTGAGACTCTCCTGTGACGCCTCTGGATTCACCTTTAGTAGCCACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-74*01  47   .....................CA.................C......T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  S  T  D  G  S  R  T  T  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  T  
                    Query_6409   91   TGTGGGTCTCACGTATTAGTACTGATGGGAGTCGCACAACCTACGTGGACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  94.4% (236/250)  IGHV3-74*01  137  ..................A..G..........A......G.....C..........A.............................G...  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  A  S  G  R  V  
                    Query_6409   181  AGAACACACTGTATCTGCAATTGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGAGATAGCGCGTCCGGTCGAGTTT  270
V  94.4% (236/250)  IGHV3-74*01  227  .......G............A...............................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD6-6*01   10   -----------------------------------------------------------------------...T.....----------  18

                                      ------->                                 
                                      L  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_6409   271  TAGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  311
J  97.4% (38/39)    IGHJ6*02     24   --............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_100813

Length=246
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           268     4e-74
IGHJ6*02                                                                                              58.4    6e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	N/A	IGHJ6*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGCC	N/A	N/A	N/A	TGGGG	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	73	1	0	98.6
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	187	10	10	0	0	100
Total	N/A	N/A	183	177	6	0	96.7


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_6410   5    AGGTGCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  94
V  96.7% (177/183)  IGHV5-51*03  2    ............................G.............................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  R  L  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_6410   95   ATTACTGGATCGCCTGGGTGCGCCGGCTGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  184
V  96.7% (177/183)  IGHV5-51*03  92   GC..........G...........A.A...............................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------FR3-IMGT----------------->
                                      S  L  G  P  R  D  R  G  H  R  L  L  
                    Query_6410   185  GCCTGGGGCCAAGGGACCGCGGTCACCGTCTCCTCA  220
V  96.7% (177/183)  IGHV5-51*03  182  ...---------------------------------  184
                                      S                                   
J  97.0% (32/33)    IGHJ6*02     30   ---...............A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 23124429


Query= Query_100812

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         338     5e-95
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	N/A	TTCGCCACACTTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTTCGCCACACTTCTTACTACTTCTACGCTTTGGACGTC	ARVRHTSYYFYALDV	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  H  P  P  G  K  G 
                    Query_6411     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCATCCCCCCGGGAAGGGC  90
V  93.2% (233/250)  IGHV4-30-4*01  49   ..................A..............................A........................G.....A.........  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  Y  I  G  Y  V  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  V  S  I  L  V  D  T  S 
                    Query_6411     91   CTGGAGTACATTGGGTACGTCTATTACAGTGGGACTACCTACTATAATAAGTCTCTCAAGAGTCGAGTTAGCATATTAGTAGACACGTCC  180
V  93.2% (233/250)  IGHV4-30-4*01  139  .......GG.........A...............GC........C..CCC...C................C.....C.............  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  H  T  S  Y  Y 
                    Query_6411     181  AAGAACCAGTTCTCCCTGAAGCTGAGATCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGTTCGCCACACTTCTTACTAC  270
V  93.2% (233/250)  IGHV4-30-4*01  229  ..........................C...........................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  93.0% (53/57)    IGHJ6*02       6    ------------------------------------------------------------------------------------......  11

                                        ----------------->                                 
                                         F  Y  A  L  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_6411     271  TTCTACGCTTTGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  321
J  93.0% (53/57)    IGHJ6*02       12   .A.....G.A..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_100811

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           332     3e-93
IGHD3-10*01                                                                                           10.3    119  
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCCA	GGGGA	TC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGCCAGGGGATCCTACGGTATGGACGTC	ARDARGSYGMDV	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G  
                    Query_6412   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTATTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  92.4% (231/250)  IGHV4-31*02  50   .....TCC...A........................................C.A.....G..............A..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  H  Y  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S  
                    Query_6412   94   TGGAGTGGATTGGGAACATCCATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTAGACACGTCTA  183
V  92.4% (231/250)  IGHV4-31*02  140  ..............T.....T...................C.................G........T......................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  Q  F  S  L  E  L  T  S  M  T  A  A  D  T  V  V  Y  Y  C  A  R  D  A  R  G  S  Y  G  
                    Query_6412   184  AGAACCAGTTCTCCCTGGAGCTGACCTCTATGACAGCCGCGGACACGGTCGTCTATTACTGTGCGAGAGATGCCAGGGGATCCTACGGTA  273
V  92.4% (231/250)  IGHV4-31*02  230  .................A......G....G....T.............C...G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  16   ---------------------------------------------------------------------------.....----------  20
J  91.7% (44/48)    IGHJ6*02     14   ----------------------------------------------------------------------------------........  21

                                      ------->                                
                                      M  D  V  W  G  Q  G  I  P  V  P  V  S  S
                    Query_6412   274  TGGACGTCTGGGGCCAAGGGATTCCGGTCCCCGTCTCCTC  313
J  91.7% (44/48)    IGHJ6*02     22   .....................CCA.....A..........  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_92302

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           343     2e-96
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6413   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (232/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_6413   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  T  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_6413   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCACTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  94.7% (232/245)  IGHV4-59*01  229  .........C....G.....C.........G................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_6413   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_100819

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           276     3e-76
IGHD3-10*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAC	TGGAGGGGGCTTCGGGAGC	TTATTATAAC	GGACGGCGGGGACT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACTGGAGGGGGCTTCGGGAGCTTATTATAACGGACGGCGGGGACTTATGGACGTC	ARLEGASGAYYNGRRGLMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	12	9	0	57.1
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	213	37	0	85.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  F  S  T  S  D  Y  W  V  W  I  R  Q  T  P  G  K  G 
                    Query_6414   1    ACCCTGTCCCTCACCTGCACCGTCTCTGGCGGCTCCATCTTCAGTACTTCTGACTACTGGGTCTGGATCCGCCAGACCCCCGGGAAGGGA  90
V  85.2% (213/250)  IGHV4-39*01  49   ....................T........T.........AG.....G.AG.T.........G.............C....A........G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  A  V  H  H  T  R  R  T  Y  Y  N  P  S  L  K  S  R  S  T  M  S  V  D  I  S 
                    Query_6414   91   CTGGAGTGGATTGGGGCTGTTCATCACACTAGAAGAACCTACTACAACCCGTCCCTCAAAAGTCGATCCACCATGTCCGTAGACATATCT  180
V  85.2% (213/250)  IGHV4-39*01  139  ...............AG.A.CT..T.T.G.G.G..C.......................G......GT......A..........CG..C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       R  N  Q  F  S  L  T  L  R  S  V  T  A  A  D  T  S  V  Y  Y  C  A  R  L  E  G  A  S  G  A 
                    Query_6414   181  AGGAACCAGTTCTCCCTGACCCTGAGGTCTGTGACCGCCGCAGACACGTCTGTTTATTACTGTGCGCGACTGGAGGGGGCTTCGGGAGCT  270
V  85.2% (213/250)  IGHV4-39*01  229  .A.................AG.....C.....................G....G............A...--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (10/10)   IGHD3-10*01  22   -----------------------------------------------------------------------------------------.  22

                                      DR3-IMGT------------------------>                                 
                                       Y  Y  N  G  R  R  G  L  M  D  V  W  G  Q  G  T  T  D  I  V  S  S 
                    Query_6414   271  TATTATAACGGACGGCGGGGACTTATGGACGTCTGGGGCCAAGGGACCACGGACATCGTGTCCTCA  336
D  100.0% (10/10)   IGHD3-10*01  23   .........---------------------------------------------------------  31
J  93.0% (40/43)    IGHJ6*02     20   -----------------------.............................T..C...C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_100818

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           324     7e-91
IGHD6-19*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	AATCC	ATATCAGTGGCTGGT	GTGGAG	GACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GAATCCATATCAGTGGCTGGTGTGGAGGACCAC	ESISVAGVEDH	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         P  L  R  L  S  C  A  G  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6415   1    GGCCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTCAGTTCCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGC  90
V  92.6% (225/243)  IGHV3-30*03  47   ..T.....................C...................AG.....G.....................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  L  I  S  Y  D  G  S  N  M  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6415   91   AATGGGTGGCACTTATATCATATGATGGAAGTAATATGCACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.6% (225/243)  IGHV3-30*03  137  .G.........G........................AAT...................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  S  T  V  Y  L  Q  M  N  S  L  R  S  E  D  T  A  V  Y  Y  C  E  S  I  S  V  A  G  V  E  
                    Query_6415   181  AGAGCACAGTTTATCTCCAAATGAACAGCCTGAGAAGTGAGGACACGGCTGTGTATTACTGTGAATCCATATCAGTGGCTGGTGTGGAGG  270
V  92.6% (225/243)  IGHV3-30*03  227  ...A...GC.G.....G..................GC..........................---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  93.3% (14/15)    IGHD6-19*01  5    --------------------------------------------------------------------...G...........-------  19
J  95.0% (38/40)    IGHJ4*02     9    -----------------------------------------------------------------------------------------.  9

                                      ---->                                  
                                      D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6415   271  ACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCATCAG  309
J  95.0% (38/40)    IGHJ4*02     10   ..T...............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_255755

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           276     3e-76
IGHD3-10*02                                                                                           16.1    2.4  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCAGTTCA	ATGTTCGG	AGGTTCGCCAGCAGCAATCAATTTGTTCTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCAGTTCAATGTTCGGAGGTTCGCCAGCAGCAATCAATTTGTTCTCCTACGGAATGGACATC	AKDRSSMFGGSPAAINLFSYGMDI	240	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	24	17	4	3	70.8
FR3-IMGT	126	239	114	99	15	0	86.8
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	250	215	32	3	86


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  S  V  T  S  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6416   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGGTTCAGCGTCACTAGCAACTACATGAATTGGGTCCGGCAGGCTCCAGGCAAGGGGCTGG  90
V  86.0% (215/250)  IGHV3-30*18  47   ....................G..........A....C.T...G....T.TGG....C.C........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  F  D  G  S  K     Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_6416   91   AGTGGGTGGCACTTATATCATTCGATGGATCTAA---ATACTATGCGGACTCCGTGAAGGGCCGTTTCACCGTCTCCAGAGACAACTCCG  177
V  86.0% (215/250)  IGHV3-30*18  137  ...........G.........AT......AG...TAA.........A.................A......A.............T...A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      G  G  T  L  D  L  Q  M  S  S  L  R  P  E  D  T  A  I  Y  F  C  A  K  D  R  S  S  M  F  G  
                    Query_6416   178  GGGGCACGCTGGATCTGCAAATGAGCAGCCTGAGACCTGAGGACACGGCTATTTACTTCTGTGCGAAAGATCGCAGTTCAATGTTCGGAG  267
V  86.0% (215/250)  IGHV3-30*18  227  A.AA.......T............A..........G..............G.G..T.A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD3-10*02  9    --------------------------------------------------------------------------------........--  16

                                      ----CDR3-IMGT------------------------------>                                
                                      G  S  P  A  A  I  N  L  F  S  Y  G  M  D  I  W  G  Q  G  A  T  V  T  V  S  S
                    Query_6416   268  GTTCGCCAGCAGCAATCAATTTGTTCTCCTACGGAATGGACATCTGGGGCCAAGGGGCCACGGTCACCGTCTCCTC  343
J  93.8% (45/48)    IGHJ6*02     14   ----------------------------......T......G..............A...................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_312106

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           343     2e-96
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CATGCTTTCCTCGACTGATATGT	CGTTCGGGGGA	TTTTTGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACATGCTTTCCTCGACTGATATGTCGTTCGGGGGATTTTTGATTGACCAG	ARDMLSSTDMSFGGFLIDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  S  S  R  S  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_6417   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGACTCCATCAGCAGTAGAAGTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGG  90
V  93.6% (235/251)  IGHV4-39*02  49   ...................C...........G...............T...........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  E  S  R  V  A  I  S  I  D  T  S 
                    Query_6417   91   CTGGAATGGATTGGGAATATCTATTATAGTGGGAGCACCGACTACAACCCGTCCCTCGAGAGTCGAGTCGCCATATCGATAGACACGTCC  180
V  93.6% (235/251)  IGHV4-39*02  139  .....G..........G......................T.................A...........A.......CG...........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  M  L  S  S  T  D 
                    Query_6417   181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACCGCCGCAGACACGGCTATTTATTACTGTGCGAGAGACATGCTTTCCTCGACTGAT  270
V  93.6% (235/251)  IGHV4-39*02  229  ........C............C....C........................G.G.................-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       M  S  F  G  G  F  L  I  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6417   271  ATGTCGTTCGGGGGATTTTTGATTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  90.9% (10/11)    IGHD3-16*01  13   ----....T......-------------------------------------------------  23
J  95.2% (40/42)    IGHJ4*02     7    ----------------------.....T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_109272

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           361     4e-102
IGHD6-19*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	CG	GTGGCTGG	GTCGGTAAGGGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGCGGTGGCTGGGTCGGTAAGGGGGACTAC	ASGGWVGKGDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	239	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  Y  W  I  H  W  V  R  Q  A  P  G  K  G  P  
                    Query_6418   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTATTACTGGATACACTGGGTCCGCCAAGCTCCAGGGAAGGGGCCGA  90
V  96.8% (239/247)  IGHV3-74*01  47   ............................................AGC........G...............................T.G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      M  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6418   91   TGTGGGTCTCACGTATTAATAGTGATGGGAGTAGCACAAGTTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (239/247)  IGHV3-74*01  137  ........................................C.................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  G  G  W  V  G  K  G  
                    Query_6418   181  AGAACACGGTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGCGGTGGCTGGGTCGGTAAGGGGG  270
V  96.8% (239/247)  IGHV3-74*01  227  ........C..........................................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD6-19*01  11   ---------------------------------------------------------------------........-------------  18
J  100.0% (40/40)   IGHJ4*02     9    -----------------------------------------------------------------------------------------.  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6418   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (40/40)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_132743

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           25.7    0.003
IGHJ5*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGGGGCGCGCCC	GTATTACTTTGATAGT	CATAGGCCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCGGGGGCGCGCCCGTATTACTTTGATAGTCATAGGCCTTTCGACTCC	ARAGARPYYFDSHRPFDS	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  R  G  L  E  
                    Query_6419   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAGT  93
V  94.7% (230/243)  IGHV4-59*01  50   .....TCC...A.............................A....................................A...........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  M  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  S  K  N  
                    Query_6419   94   GGATTGGGTATATGTATTACAGTGGTAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCCTATCAGTAGACACGTCCAAGAACC  183
V  94.7% (230/243)  IGHV4-59*01  140  .............C...........G.......................................A........................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      L  F  S  L  K  L  F  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  A  R  P  Y  Y  F  D  
                    Query_6419   184  TGTTCTCCCTGAAGCTGTTCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGCGGGGGCGCGCCCGTATTACTTTGATA  273
V  94.7% (230/243)  IGHV4-59*01  230  A................AG........................................A...---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  93.8% (15/16)    IGHD3-22*01  1    ----------------------------------------------------------------------------........A.....  14

                                      ------------------->                                  
                                      S  H  R  P  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_6419   274  GTCATAGGCCTTTCGACTCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  327
D  93.8% (15/16)    IGHD3-22*01  15   ..----------------------------------------------------  16
J  95.3% (41/43)    IGHJ5*01     9    -----------.................A...A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_92301

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           308     4e-86
IGHD3-9*01                                                                                            12.2    30   
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCAG	N/A	GACTGG	GAAAGACGGACGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCGCAGGACTGGGAAAGACGGACGCTGACTAC	AAGLGKTDADY	236	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	23	1	0	95.8
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	121	30	26	4	0	86.7
FR3-IMGT	122	235	114	107	7	0	93.9
CDR3-IMGT (germline)	236	242	7	5	2	0	71.4
Total	N/A	N/A	229	213	16	0	93


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><----------C
                                       S  G  F  T  F  S  D  A  W  M  T  W  L  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  I  K 
                    Query_6420   14   TCTGGATTCACTTTCAGTGACGCCTGGATGACCTGGCTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAATCAAA  103
V  93.0% (213/229)  IGHV3-15*01  73   ..................A............G....G................................................G....  162
                                       S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K 

                                      DR2-IMGT---------><----------------------------------------------------FR3-IMGT-----------
                                       I  H  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  I  I  S  R  D  D  S  K  S  T  L  Y  L  Q 
                    Query_6420   104  ATTCATGGTGAGACAACAGACTACGCTGCTCCCGTAAAAGGCAGATTCATCATCTCAAGAGATGATTCAAAAAGTACACTGTATCTGCAA  193
V  93.0% (213/229)  IGHV3-15*01  163  .C.G......G..................A.....G.............C.......................AC..G............  252
                                       T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q 

                                      -----------------------------------------><-----------CDR3-IMGT----------->               
                                       M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  A  G  L  G  K  T  D  A  D  Y  W  G  Q  G  T 
                    Query_6420   194  ATGAACAGCCTGAAGACCGAGGACACAGCCGTGTATTACTGTGCCGCAGGACTGGGAAAGACGGACGCTGACTACTGGGGCCAGGGAACC  283
V  93.0% (213/229)  IGHV3-15*01  253  ..............A...........................A..A...-----------------------------------------  301
                                       M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                                           
D  100.0% (6/6)     IGHD3-9*01   16   -------------------------------------------------......-----------------------------------  21
J  100.0% (41/41)   IGHJ4*02     8    --------------------------------------------------------------------......................  29

                                                         
                                       L  V  T  V  S  S  
                    Query_6420   284  CTGGTCACCGTCTCCTCAG  302
J  100.0% (41/41)   IGHJ4*02     30   ...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_188267

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*14                                                                                           383     1e-108
IGHD3-22*01                                                                                           33.4    2e-05 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*14	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCGGATC	ACTATGATAGTAGTGGT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCGGATCACTATGATAGTAGTGGTTACTACTACTATAATATGGACGTC	ARVPDHYDSSGYYYYNMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	18	6	0	75
FR3-IMGT	177	290	114	104	10	0	91.2
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	270	25	0	91.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  V  N 
                    Query_6421   3    CAGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGTAAGGCTTCTGGAGGCACCGTCAAC  92
V  91.5% (270/295)  IGHV1-69*14  1    ..............G........G.........................................C..................T...G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  A  I  S  W  V  R  Q  A  P  G  H  G  L  E  W  V  G  V  V  I  L  L  L  D  T  S  Y  Y 
                    Query_6421   93   AACTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACACGGGCTTGAGTGGGTGGGAGTGGTCATCCTTCTCTTGGATACATCATATTAC  182
V  91.5% (270/295)  IGHV1-69*14  91   .G....................................A............A......G.A......C.A....T.G....G..A.C...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       P  Q  K  F  Q  G  R  V  S  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  D  D 
                    Query_6421   183  CCGCAGAAGTTCCAGGGCAGAGTCTCCATTACCGCGGACAAATCCACGAGCACTGCCTACATGGAGTTGAGCAGCCTGAGATCTGATGAC  272
V  91.5% (270/295)  IGHV1-69*14  181  G.A.....................A.G..........................A............C...................G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  V  Y  Y  C  A  R  V  P  D  H  Y  D  S  S  G  Y  Y  Y  Y  N  M  D  V  W  G  Q  G  T 
                    Query_6421   273  ACGGCCGTTTATTACTGTGCGAGAGTTCCGGATCACTATGATAGTAGTGGTTACTACTACTATAATATGGACGTCTGGGGCCAAGGGACC  362
V  91.5% (270/295)  IGHV1-69*14  271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (17/17)   IGHD3-22*01  6    ----------------------------------.................---------------------------------------  22
J  93.0% (53/57)    IGHJ6*02     6    ---------------------------------------------------...........CGG.........................  44

                                                        
                                       T  I  T  V  S  S 
                    Query_6421   363  ACGATCACCGTCTCCTCA  380
J  93.0% (53/57)    IGHJ6*02     45   ...G..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_135848

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCGG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGGAACTGGTTCGACCCC	ARGGWRRQRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	219	26	0	89.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  F  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_6422   1    ACCCTGTCCCTCACCTGCGCTGTGTTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  89.4% (219/245)  IGHV4-34*01  49   .......................C.A..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  T  R  Y  N  P  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_6422   91   TGGATTGGGGAAATCAGTCATAGTGGAAGTACGAGGTACAACCCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAG  180
V  89.4% (219/245)  IGHV4-34*01  139  ................A............C..C.AC.........T......A...............A....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  P  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W 
                    Query_6422   181  CAAATCTCCCTGAAGTTGCCCTCTGCGACCGCCGCGGACACGGCTGTATATTACTGTGCGCGAGGGGGCTGGCGAAGACAGCGGAACTGG  270
V  89.4% (219/245)  IGHV4-34*01  229  ..GT...........C..AG.....T.....................G............A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6422   271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (48/49)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_135849

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           350     8e-99
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGCG	TCGGGGGGTT	TTGATACCA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGCGTCGGGGGGTTTTGATACCAGACTAC	ARDRRRGVLIPDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  V  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  E  G  L  
                    Query_6423   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCGTCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCGAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-33*01  47   ...................................AC........G..................................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  H  I  L  Y  D  G  S  N  T  Y  Y  A  D  S  V  Q  G  R  F  I  I  S  R  D  N  S  
                    Query_6423   91   AGTGGGTGGCACATATATTGTATGATGGAAGTAACACATACTATGCAGACTCCGTGCAGGGCCGATTCATCATCTCCAGAGACAATTCCA  180
V  94.8% (237/250)  IGHV3-33*01  137  ...........GT.....G...............T.A...................A............C....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  R  R  G  V  L  
                    Query_6423   181  AGAACACGCTGTTTCTGCAAATGAACAGCCTGAGGGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATAGGCGTCGGGGGGTTTTGA  270
V  94.8% (237/250)  IGHV3-33*01  227  ............A.....................A...................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-10*01  14   ----------------------------------------------------------------------------......A...----  23

                                      ---------->                                  
                                      I  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6423   271  TACCAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (40/40)   IGHJ4*02     9    -----........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_135845

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         396     2e-112
IGHD5-12*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCACAG	TAGTGGCCACG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCACAGTAGTGGCCACGACTACTTTGGCTAC	ARLHSSGHDYFGY	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	77	72	68	4	0	94.4
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	106	8	0	93
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  R  I  S  C  E  G  S  G  Y  T  F  A  T 
                    Query_6424     6    GTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGCAGTCTCTGAGGATCTCCTGTGAGGGTTCTGGATACACCTTCGCCACC  95
V  93.5% (272/291)  IGHV5-10-1*01  4    ..G.....G.................................G....................A...............G...TA...G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  K  I  D  P  S  D  S  Y  T  N  Y  S 
                    Query_6424     96   TATTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAAGATTGATCCTAGTGACTCTTATACCAACTACAGC  185
V  93.5% (272/291)  IGHV5-10-1*01  94   ..C..................................................G.G..................................  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  Q  G  H  V  T  I  S  T  D  N  S  I  T  T  A  Y  L  Q  W  N  S  L  K  A  S  D  T 
                    Query_6424     186  CCGTCCTTCCAAGGCCACGTCACCATCTCAACTGACAATTCCATCACCACTGCCTACCTGCAGTGGAACAGTCTGAAGGCCTCGGACACA  275
V  93.5% (272/291)  IGHV5-10-1*01  184  ..............................G.......G.......G....................G...C.................C  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><--------------CDR3-IMGT-------------->                                  
                                         A  M  Y  Y  C  A  R  L  H  S  S  G  H  D  Y  F  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6424     276  GCCATGTATTATTGCGCGAGACTTCACAGTAGTGGCCACGACTACTTTGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  363
V  93.5% (272/291)  IGHV5-10-1*01  274  ...........C..T......-------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                    
D  90.9% (10/11)    IGHD5-12*01    8    -----------------------------.......T...------------------------------------------------  18
J  97.9% (47/48)    IGHJ4*02       1    ----------------------------------------.........A......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_135846

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           346     2e-97
IGHD2-21*02                                                                                           18.0    0.61 
IGHJ1*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTCACAGTATTGTGGCGC	TGGCGACTGCTA	CGCCTCC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCACAGTATTGTGGCGCTGGCGACTGCTACGCCTCCGCTGAGTACTTCCAGCAC	ARHSQYCGAGDCYASAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6425   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*08  49   .............................................T..........C.................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_6425   91   TGGATTGGGTATATCTATTCCAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGTTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*08  139  ...................A...............C...................................AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       H  F  S  L  T  L  T  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  H  S  Q  Y  C  G  A  G  D 
                    Query_6425   181  CACTTCTCCCTGACCCTGACCTCTGTGGCCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATTCACAGTATTGTGGCGCTGGCGAC  270
V  95.1% (233/245)  IGHV4-59*08  229  ..G..........AG....G.......A.....................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD2-21*02  13   -----------------------------------------------------------------------------------...T...  19

                                      MGT-------------------------->                                  
                                       C  Y  A  S  A  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6425   271  TGCTACGCCTCCGCTGAGTACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  334
D  91.7% (11/12)    IGHD2-21*02  20   .....-----------------------------------------------------------  24
J  96.2% (50/52)    IGHJ1*01     1    ------------.....A.........................................C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_135840

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           297     7e-83
IGHD3-9*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGACCCA	TACGGTATTTTG	GCTATTGAGAAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGTGACCCATACGGTATTTTGGCTATTGAGAAG	ATGDPYGILAIEK	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	42	9	0	82.4
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  N  Y  W  S  W  I  R  Q  S  P  A  K  G 
                    Query_6426   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGCCAACTACTGGAGTTGGATCCGCCAATCCCCTGCAAAGGGC  90
V  88.0% (220/250)  IGHV4-31*03  49   .................................................GTT..........C...........GCA...A.GG......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  T  T  E  Y  N  P  S  L  K  S  R  L  T  M  S  I  D  P  S 
                    Query_6426   91   CTCGAGTGGATTGGATACATCTATTATGGTGGGACCACCGAGTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCCATTGACCCGTCT  180
V  88.0% (220/250)  IGHV4-31*03  139  ..G...........G...........CA......G....T.C...........C............G.T.....A..AG.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       T  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  D  P  Y  G  I  L 
                    Query_6426   181  ACGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGTGACCCATACGGTATTTTG  270
V  88.0% (220/250)  IGHV4-31*03  229  .A...................C...G...........................G.............G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD3-9*01   5    ------------------------------------------------------------------------------....A.......  16

                                      ----------->                                
                                       A  I  E  K  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6426   271  GCTATTGAGAAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
J  100.0% (32/32)   IGHJ4*02     15   ------------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_135841

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	70	4	0	94.6
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	295	280	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  
                    Query_6427   4    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCA  93
V  94.9% (280/295)  IGHV5-51*01  2    ....G.....G......................A...................................G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  
                    Query_6427   94   ACTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACA  183
V  94.9% (280/295)  IGHV5-51*01  92   G...........G...........................C....................C...................C........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  R  K  A  S  D  
                    Query_6427   184  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCGGAAGGCCTCGGACA  273
V  94.9% (280/295)  IGHV5-51*01  182  ...........C.....................................C...........G......A......T..............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  
                    Query_6427   274  CCGCCATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  363
V  94.9% (280/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  92.9% (13/14)    IGHD1-26*01  4    ---------------------------------..........C...-------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    --------------------------------------------------.......A................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_6427   364  CGGTCACCGTCTCCTCA  380
J  98.2% (56/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_135842

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           321     7e-90
IGHD3-10*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CGAGTCAAATCCTC	TGGTTCGGGGAG	GGCAAAA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCGAGTCAAATCCTCTGGTTCGGGGAGGGCAAAAACTACTTTGACCAC	AKASQILWFGEGKNYFDH	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  N  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6428   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAATAACTTTGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.2% (227/249)  IGHV3-30*18  47   ....................G.....................G..G..A...C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  Y  D  G  S  K  K  F  Y  A  D  S  L  R  G  R  F  T  I  S  R  D  S  S  
                    Query_6428   91   AGTGGCTGGCAGTTATTTCATATGATGGAAGTAAAAAGTTCTATGCAGACTCCTTGAGGGGCCGATTTACCATCTCCAGAGACAGCTCCA  180
V  91.2% (227/249)  IGHV3-30*18  137  .....G..........A.................T..A.A.............G...A.........C................AT....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  S  S  L  G  A  E  D  T  A  V  Y  Y  C  A  K  A  S  Q  I  L  W  F  
                    Query_6428   181  AGAACACACTGTATCTCCAAATGAGCAGCCTGGGCGCTGAGGACACGGCTGTCTATTATTGTGCGAAAGCGAGTCAAATCCTCTGGTTCG  270
V  91.2% (227/249)  IGHV3-30*18  227  .......G........G.......A.......A.A.................G.....C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD3-10*01  10   -----------------------------------------------------------------------------------.......  16

                                      IMGT--------------------->                                  
                                      G  E  G  K  N  Y  F  D  H  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_6428   271  GGGAGGGCAAAAACTACTTTGACCACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  330
D  100.0% (12/12)   IGHD3-10*01  17   .....-------------------------------------------------------  21
J  95.8% (46/48)    IGHJ4*02     1    ------------...........T.......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_135843

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAGTTAT	CAGGGT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGGCTCCACCCC	ARSGSGSYQGWLHP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  P  Y  Y  W  I  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6429   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGTCCTTACTACTGGATCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.1% (223/242)  IGHV4-59*01  49   ..................A............G..........AG...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  H  I  F  Y  T  G  S  T  K  Y  K  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  K 
                    Query_6429   91   TGGCTTGGCCATATCTTTTACACTGGGAGCACCAAATACAAGCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCCAGGAAG  180
V  92.1% (223/242)  IGHV4-59*01  139  ...A....GT......A.....G............C.....C..........................A...G............A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  S  Y  Q  G  W 
                    Query_6429   181  CAGTTCTCCCTGAAACTGCGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGG  270
V  92.1% (223/242)  IGHV4-59*01  229  ..............G...A.C.........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (15/15)   IGHD3-10*01  11   ------------------------------------------------------------------...............---------  25
J  87.0% (40/46)    IGHJ5*02     6    ---------------------------------------------------------------------------------------...  8

                                      -------->                                  
                                       L  H  P  W  G  L  G  R  L  V  I  V  S  S  
                    Query_6429   271  CTCCACCCCTGGGGCCTGGGAAGACTGGTCATCGTCTCCTCAG  313
J  87.0% (40/46)    IGHJ5*02     9    T..G............A.....CC.......C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_269585

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           341     5e-96
IGHD2-15*01                                                                                           39.1    3e-07
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCGACCGATCCCGGG	TATTGTAGTGGTGGTTTCTGCTACTC	GGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCGACCGATCCCGGGTATTGTAGTGGTGGTTTCTGCTACTCGGCGTTTGACTAC	AATDPGYCSGGFCYSAFDY	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  S  A  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_6430   1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGCCTCCGTCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  94.3% (232/246)  IGHV4-61*01  49   ...........................G...G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  N  G  D  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  E  T  S 
                    Query_6430   91   CTGGAGTGGATTGGATATATCTATTACAATGGAGACACCAACTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGAGACGTCC  180
V  94.3% (232/246)  IGHV4-61*01  139  ..............G.............G...GAG............C...................................C......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  A  T  D  P  G  Y  C  S 
                    Query_6430   181  AAGAACCAGTTCTCCCTTAACCTGAGCTCTGTGACTGCCGCGGACACGGCCATGTATTACTGTGCGGCGACCGATCCCGGGTATTGTAGT  270
V  94.3% (232/246)  IGHV4-61*01  229  .................G..G..............C..T............G..............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  92.3% (24/26)    IGHD2-15*01  5    ---------------------------------------------------------------------------------.........  13

                                      3-IMGT----------------------->                                  
                                       G  G  F  C  Y  S  A  F  D  Y  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_6430   271  GGTGGTTTCTGCTACTCGGCGTTTGACTACTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  334
D  92.3% (24/26)    IGHD2-15*01  14   ......AG.........-----------------------------------------------  30
J  97.7% (42/43)    IGHJ4*02     6    ---------------------.........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_341456

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            382     4e-108
IGHD2-15*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCACCCCAGTATCGT	GTGGTGGCTGCTAC	GGGAC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCACCCCAGTATCGTGTGGTGGCTGCTACGGGACACTACTATTACGGTATGGACGTC	AAPQYRVVAATGHYYYGMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	265	21	0	92.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_6431   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGCTACACCTTCACTAGTTA  90
V  92.7% (265/286)  IGHV1-8*01   6    ..................................................A.....................A...........C.....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  S  S  G  N  T  G  F  A  Q
                    Query_6431   91   TGACATCAACTGGGTGCGGCAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCAAGCAGTGGTAACACAGGCTTTGCACA  180
V  92.7% (265/286)  IGHV1-8*01   96   ...T..............A............................................T.A.................A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  K  V  S  L  T  R  D  I  S  T  S  T  G  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_6431   181  GAAGTTCCAGGGCAAAGTCAGTTTGACCAGGGATATTTCCACAAGCACAGGCTACATGGAACTGAGTAGCCTGAGATCTGAGGACACGGC  270
V  92.7% (265/286)  IGHV1-8*01   186  ..............G.....CCA........A.C.CC....T........C.........G.....C.......................  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        V  Y  F  C  A  A  P  Q  Y  R  V  V  A  A  T  G  H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T
                    Query_6431   271  CGTGTATTTCTGTGCGGCACCCCAGTATCGTGTGGTGGCTGCTACGGGACACTACTATTACGGTATGGACGTCTGGGGCCAAGGGACCAC  360
V  92.7% (265/286)  IGHV1-8*01   276  ........A.......--------------------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                           
D  92.9% (13/14)    IGHD2-15*01  15   -------------------------------.....A........---------------------------------------------  28
J  98.2% (55/56)    IGHJ6*02     7    --------------------------------------------------.......C................................  46

                                                      
                                        V  T  V  S  S 
                    Query_6431   361  GGTCACCGTCTCCTCA  376
J  98.2% (55/56)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_269587

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           299     3e-83
IGHD1-26*01                                                                                           14.1    8.8  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTATTGCGATG	AGTGGGA	CTCGGTTTTCGAGTCGGGCTGCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTATTGCGATGAGTGGGACTCGGTTTTCGAGTCGGGCTGCCCTTGACTAC	ARGLIAMSGTRFSSRAALDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	220	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  I  D  F  A  L  S  W  V  R  Q  A  P  G  E  G  L  
                    Query_6432   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTATCGACTTCGCCCTGAGTTGGGTCCGACAGGCTCCAGGGGAGGGACTAC  90
V  88.4% (220/249)  IGHV3-23*01  47   ..........................................G.AG..AT...A....C........C............A....G..GG  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  T  I  S  G  S  G  R  G  T  S  T  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6432   91   AGTGGGTCTCAACTATCAGTGGTAGTGGTCGTGGGACCTCCACCGCGGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  88.4% (220/249)  IGHV3-23*01  137  ...........G....T............G..A.C..A.A.TA...A......................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  I  L  Y  L  Q  M  D  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  G  L  I  A  M  S  G  
                    Query_6432   181  AGAACATTCTGTACCTGCAAATGGACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAGAGGTCTTATTGCGATGAGTGGGA  270
V  88.4% (220/249)  IGHV3-23*01  227  ......CG.....T.........A................G.........................A..---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD1-26*01  6    -----------------------------------------------------------------------------------.......  12

                                      R3-IMGT------------------------>                                  
                                      T  R  F  S  S  R  A  A  L  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6432   271  CTCGGTTTTCGAGTCGGGCTGCCCTTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  336
J  97.6% (41/42)    IGHJ4*02     7    ------------------------...............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_269586

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           367     6e-104
IGHD2-2*01                                                                                            21.8    0.043 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTAGA	TCAGGATGTCCTAA	TACCAGCTGCT	CTCCGGAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTAGATCAGGATGTCCTAATACCAGCTGCTCTCCGGATCTACTACTACGGTTTGGACGTC	AVDQDVLIPAALRIYYYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	243	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  V  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_6433   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTGTTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  96.8% (243/251)  IGHV4-61*08  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  S  G  Y  I  Y  N  S  G  I  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_6433   91   CTGGAGTGGAGTGGGTATATCTATAACAGTGGGATCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  96.8% (243/251)  IGHV4-61*08  139  ..........T.............T.........G.......................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       T  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  V  D  Q  D  V  L  I  P 
                    Query_6433   181  ACGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGGTAGATCAGGATGTCCTAATACCA  270
V  96.8% (243/251)  IGHV4-61*08  229  .A.......................G........................................AG...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD2-2*01   16   -------------------------------------------------------------------------------------.....  20

                                      CDR3-IMGT-------------------------->                                 
                                       A  A  L  R  I  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6433   271  GCTGCTCTCCGGATCTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  339
D  100.0% (11/11)   IGHD2-2*01   21   ......---------------------------------------------------------------  26
J  98.2% (54/55)    IGHJ6*02     8    --------------.............A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_269581

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           313     1e-87
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAA	TATTATTATGG	AGCGGACAATACTCCCTTTTTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGAATATTATTATGGAGCGGACAATACTCCCTTTTTCCTTGACTCC	ARDEYYYGADNTPFFLDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  F  G  F  S  F  S  D  Y  G  I  H  W  V  R  Q  A  L  G  K  G  P  
                    Query_6434   1    GGTCCCTGAGACTCTCCTGTGCCGCGTTTGGATTCAGCTTCAGTGACTATGGAATACACTGGGTCCGCCAGGCTCTAGGCAAGGGGCCGG  90
V  90.0% (225/250)  IGHV3-33*01  47   ......................A....C........C.......AG......C..G...................C...........T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  M  V  W  Y  D  G  T  E  K  Y  V  A  D  S  V  K  G  R  F  T  L  S  R  D  N  S  
                    Query_6434   91   AGTGGGTGGCAATGGTCTGGTATGATGGAACTGAAAAATATGTAGCAGACTCCGTGAAGGGCCGATTCACCCTCTCCAGAGACAATTCCA  180
V  90.0% (225/250)  IGHV3-33*01  137  ...........G.TA.A.............G.A.T.....CTAT...........................A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  E  Y  Y  Y  G  A  
                    Query_6434   181  AGAACACGGTGTATTTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTCTATTACTGTGCGAGAGATGAATATTATTATGGAGCGG  270
V  90.0% (225/250)  IGHV3-33*01  227  ........C.....C.....................C...............G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD3-10*01  2    --------------------------------------------------------------------------.....C.....-----  12

                                      IMGT--------------------->                                  
                                      D  N  T  P  F  F  L  D  S  W  G  Q  G  T  L  V  T  V  Y  S  
                    Query_6434   271  ACAATACTCCCTTTTTCCTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTACTCAG  330
J  95.2% (40/42)    IGHJ4*02     7    ------------------......A.............................C.....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_269580

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD6-6*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTC	ATTREQLVPIFDF	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	268	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  L  S  S  Y
                    Query_6435   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATTTCCTGTAAGGGTTCTGGATACAGATTAAGCAGTTA  90
V  93.4% (268/287)  IGHV5-51*01  6    ......................................................C.......................C..T.C...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  G  T  K  Y  S  P
                    Query_6435   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCGTCTATCCTGGTGACTCTGGGACCAAATACAGCCC  180
V  93.4% (268/287)  IGHV5-51*01  96   C.......G..........................................G...A..................AT....G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  A  S  G  T  A  F  L  Q  W  D  S  L  K  A  S  D  T  A
                    Query_6435   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGGCCAGCGGCACCGCCTTCCTGCAGTGGGACAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (268/287)  IGHV5-51*01  186  .......C.............................T...T.A.........A..........AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_6435   271  CATGTATTACTGTGCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  356
V  93.4% (268/287)  IGHV5-51*01  276  .................---------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------.......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_17808

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           325     2e-91
IGHD6-25*01                                                                                           10.3    115  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GCCGGGATT	CAGCG	AAATCAGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGCCGGGATTCAGCGAAATCAGGCTAC	ATGRDSAKSGY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  Y  H  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6436   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACTGTCAGCAGCTACCACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTG  90
V  92.3% (227/246)  IGHV3-53*01  47   .....................................C.....T...A..T......G..............................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  T  I  Y  I  D  A  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  K  
                    Query_6436   91   AGTGGGTCTCAACTATCTATATCGATGCTACCACATACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACTATTCCAAGA  180
V  92.3% (227/246)  IGHV3-53*01  137  ...........GT...T....G..G..G..G............A....................................A.........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  T  G  R  D  S  A  K  S  G  
                    Query_6436   181  ACACACTGTATCTTCAGATGAACACCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGACAGGCCGGGATTCAGCGAAATCAGGCT  270
V  92.3% (227/246)  IGHV3-53*01  227  ....G...........A.......G......................................G..------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (5/5)     IGHD6-25*01  9    ---------------------------------------------------------------------------.....----------  13
J  100.0% (38/38)   IGHJ4*02     11   ----------------------------------------------------------------------------------------..  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6436   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (38/38)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_269582

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            396     2e-112
IGHD6-6*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	71	0	0	100
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	100	14	0	87.7
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                     <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  G  
                    Query_6437  7    TGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCGGCT  96
V  93.5% (272/291)  IGHV1-8*02  5    ..............................................................................C.....C.A...  94
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  

                                     ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                     Y  D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  
                    Query_6437  97   ATGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCAC  186
V  93.5% (272/291)  IGHV1-8*02  95   .........A.........................................................C......................  184
                                     Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  

                                     -------------------------------------------FR3-IMGT---------------------------------------
                                     Q  K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  
                    Query_6437  187  AGAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGG  276
V  93.5% (272/291)  IGHV1-8*02  185  ........C............C.......A..A...C.T....A..................C..........G.GAT....G.......  274
                                     Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                     -------------><-------------CDR3-IMGT------------>                                  
                                     A  V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6437  277  CCGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  93.5% (272/291)  IGHV1-8*02  275  ....G................---------------------------------------------------------------  295
                                     A  V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    --------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    --------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_17806

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           355     3e-100
IGHD3-10*01                                                                                           14.1    9.2   
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCCGAATAGGGGGCTCGTGCGACCTACGG	TCGGGGA	CCATTTCGGTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCCGAATAGGGGGCTCGTGCGACCTACGGTCGGGGACCATTTCGGTCACTACTACTACGGTATGGACGAC	AAPNRGLVRPTVGDHFGHYYYGMDD	243	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  T  W  V  R  R  G  P  G  K  G  L  
                    Query_6438   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACCTTTAGCAGCTATGCCATGACCTGGGTCCGCCGGGGTCCAGGGAAGGGGCTGG  90
V  96.3% (236/245)  IGHV3-23*01  47   ...............................A.........................G...........A..C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6438   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTAGTAACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.3% (236/245)  IGHV3-23*01  137  .............................G...G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  A  P  N  R  G  L  V  R  
                    Query_6438   181  AGAACACCCTGTATCTGCAAATGAACAGCCTGAGAGCAGACGACACGGCCGTATATTACTGTGCGGCCCCGAATAGGGGGCTCGTGCGAC  270
V  96.3% (236/245)  IGHV3-23*01  227  .......G.............................C..G........................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      -----CDR3-IMGT-------------------------------->                                 
                                      P  T  V  G  D  H  F  G  H  Y  Y  Y  G  M  D  D  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6438   271  CTACGGTCGGGGACCATTTCGGTCACTACTACTACGGTATGGACGACTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  350
D  100.0% (7/7)     IGHD3-10*01  14   ------.......-------------------------------------------------------------------  20
J  98.2% (55/56)    IGHJ6*02     7    ------------------------.....................T..................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_17802

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD7-27*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TAC	ACTGGGG	CCCCATCTGAGGAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATACACTGGGGCCCCATCTGAGGAATTTGACTGC	AKYTGAPSEEFDC	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  Y  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6439   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCTACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-23*01  47   ..........................................G.AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  V  S  R  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_6439   91   AGTGGGTCTCAACTATTAGTGGTAGTGTTAGTAGGACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  95.2% (236/248)  IGHV3-23*01  137  ...........G...............G.G....C....................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  M  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  Y  T  G  A  P  S  E  
                    Query_6439   181  AGAATACGATGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAAATACACTGGGGCCCCATCTGAGG  270
V  95.2% (236/248)  IGHV3-23*01  227  ....C...C.........................................G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD7-27*01  4    -----------------------------------------------------------------------.......------------  10

                                      ---------->                                  
                                      E  F  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6439   271  AATTTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (42/43)    IGHJ4*02     6    --.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_269588

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD6-19*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTA	GGGTATAGTAGTGGCTGGTAC	TATGACAAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTAGGGTATAGTAGTGGCTGGTACTATGACAAATTTGACTAC	AKDVGYSSGWYYDKFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6440   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGGCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ...............................................T...C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  G  S  G  S  I  R  E  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6440   91   AGTGGGTCTCAAGTGTTAGTGGAAGTGGTAGTATCAGAGAATACGCAGAATCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  ...........GC.A.......T......G...G..C.T.C........C........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  V  G  Y  S  S  G  
                    Query_6440   181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTATTGTGCGAAAGATGTAGGGTATAGTAGTGGCT  270
V  94.0% (235/250)  IGHV3-23*01  227  ..............C.....................................A.....C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.2% (20/21)    IGHD6-19*01  1    --------------------------------------------------------------------------........C.......  16

                                      GT-------------------->                                  
                                      W  Y  Y  D  K  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6440   271  GGTACTATGACAAATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.2% (20/21)    IGHD6-19*01  17   .....----------------------------------------------------  21
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_17800

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           336     1e-94
IGHD2-15*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CCTAAGTGGGGGGAGGGGCCC	GTGGTAGCTGC	CCCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCCTAAGTGGGGGGAGGGGCCCGTGGTAGCTGCCCCTCTTGACTAC	APKWGEGPVVAAPLDY	239	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	10	1	0	90.9
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	24	0	0	100
FR3-IMGT	125	238	114	112	2	0	98.2
CDR3-IMGT (germline)	239	241	3	3	0	0	100
Total	N/A	N/A	227	221	6	0	97.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  S  H  Y  S  M  N  W  V  R  Q  A  P  G  R  G  L  E  W  V  S  S  I  
                    Query_6441   15   GTACAGCCTCTGGATTCACCTTCAGTCACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGGAGTGGGTCTCATCCATTA  104
V  97.4% (221/227)  IGHV3-21*01  65   ..G.......................AG...................................A..........................  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  S  S  L  Y  L  
                    Query_6441   105  GTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAGCTCACTGTATCTGC  194
V  97.4% (221/227)  IGHV3-21*01  155  ...........................................................................A..............  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  P  K  W  G  E  G  P  V  V  A  A  P  L  D  
                    Query_6441   195  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGCCTAAGTGGGGGGAGGGGCCCGTGGTAGCTGCCCCTCTTGACT  284
V  97.4% (221/227)  IGHV3-21*01  245  ..................................G............-------------------------------------------  291
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (11/11)   IGHD2-15*01  15   --------------------------------------------------------------------...........-----------  25
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------------------------------------------......  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6441   285  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  320
J  100.0% (42/42)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_17801

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           386     1e-109
IGHD3-10*01                                                                                           23.8    0.011 
IGHJ1*01                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TAACGGCG	GGTTCGGGGAGT	N/A	CTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAACGGCGGGTTCGGGGAGTCTGAATACTTCCAGCAC	ARHNGGFGESEYFQH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	249	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_6442   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  99.2% (249/251)  IGHV4-39*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  C  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_6442   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACTGCCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  99.2% (249/251)  IGHV4-39*01  139  .............................................AA...........................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  N  G  G  F  G  E 
                    Query_6442   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATAACGGCGGGTTCGGGGAG  270
V  99.2% (249/251)  IGHV4-39*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD3-10*01  11   -------------------------------------------------------------------------------...........  21

                                      ----------------->                                  
                                       S  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6442   271  TCTGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (12/12)   IGHD3-10*01  22   .---------------------------------------------------  22
J  100.0% (51/51)   IGHJ1*01     2    -...................................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_163692

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD3-9*01                                                                                            16.1    2.6   
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGAAGGATTCCT	ATATTTTG	GGGAATCGTCATCTC	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGAAGGATTCCTATATTTTGGGGAATCGTCATCTCACGGTATGGACGTC	ARQEGFLYFGESSSHGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  T  F  T  K  Y
                    Query_6443   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGGTCTGGATACACCTTTACCAAATA  90
V  95.5% (278/291)  IGHV5-51*01  6    ....................................C........................A....T..........G........GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  S  P  G  D  S  N  T  R  Y  S  P
                    Query_6443   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGCAAAGGCCTGGAGTGGATGGGAATCATCTCTCCTGGTGACTCTAATACCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ..............................G....................G.......A.............G................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  V  K  A  S  D  S  A
                    Query_6443   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCGTGAAGGCCTCGGACAGCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  ............................................G.........................C...............C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  Q  E  G  F  L  Y  F  G  E  S  S  S  H  G  M  D  V  W  G  Q  G  T  T  V
                    Query_6443   271  CATGTATTACTGTGCGAGACAAGAAGGATTCCTATATTTTGGGGAATCGTCATCTCACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-9*01   9    ---------------------------------........-------------------------------------------------  16
J  100.0% (47/47)   IGHJ6*02     16   --------------------------------------------------------..................................  49

                                                   
                                        T  V  S  S 
                    Query_6443   361  CACCGTCTCCTCA  373
J  100.0% (47/47)   IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_341455

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           339     2e-95
IGHD1-20*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGAATACAA	GTATAAC	GGAATA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGAATACAAGTATAACGGAATAGGTATGGACGTC	TRSEYKYNGIGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6444   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTAAGTAATAATTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (231/245)  IGHV3-53*01  47   ........................................C....GC..C.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_6444   91   AGTGGGTCTCAGTTATTTATAGTGGTGGTACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.3% (231/245)  IGHV3-53*01  137  ......................C.......G..............................A............................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      T  T  L  Y  L  Q  M  N  S  L  R  A  E  D  S  A  V  Y  Y  C  T  R  S  E  Y  K  Y  N  G  I  
                    Query_6444   181  CCACACTGTATCTTCAAATGAACAGTTTGAGAGCCGAGGACTCGGCCGTGTATTACTGTACGAGATCAGAATACAAGTATAACGGAATAG  270
V  94.3% (231/245)  IGHV3-53*01  227  A...G....................CC..............A.................G.....-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD1-20*01  2    ----------------------------------------------------------------------------.......-------  8
J  100.0% (45/45)   IGHJ6*02     18   -----------------------------------------------------------------------------------------.  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6444   271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (45/45)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_188371

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           420     7e-120
IGHD5-18*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTTCCCAACCGAAATGTCAAAAC	GTGGATAC	CTGCGCCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTCCCAACCGAAATGTCAAAACGTGGATACCTGCGCCCTCTAC	ARLSQPKCQNVDTCALY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  S  Y
                    Query_6445   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTTCCAGTTA  90
V  96.5% (279/289)  IGHV5-51*03  6    ..................................................................T...............A....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_6445   91   CTGGATCGTCTGGGTGCGCCAGATGCCGGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGGCC  180
V  96.5% (279/289)  IGHV5-51*03  96   ........G..................C...........................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  T  S  L  K  A  S  D  T  A
                    Query_6445   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGACCAGCCTGAAGGCCTCGGACACCGC  270
V  96.5% (279/289)  IGHV5-51*03  186  ............................................................G....G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  A  R  L  S  Q  P  K  C  Q  N  V  D  T  C  A  L  Y  W  G  Q  G  T  L  V  T  V
                    Query_6445   271  CATTTATTATTGTGCGAGACTTTCCCAACCGAAATGTCAAAACGTGGATACCTGCGCCCTCTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  96.5% (279/289)  IGHV5-51*03  276  ...G.....C.........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD5-18*01  1    -------------------------------------------........---------------------------------------  8
J  97.4% (37/38)    IGHJ4*02     11   ------------------------------------------------------------..............................  40

                                              
                                        S  A  
                    Query_6445   361  CTCCGCAG  368
J  97.4% (37/38)    IGHJ4*02     41   ....T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_341452

Length=419
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           400     1e-113
IGHD1-26*01                                                                                           23.8    0.013 
IGHJ6*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGTCTTATGTCCCG	GTGGGAGCTACT	CCCTTAGAAGGGGCCGAGGACA	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGTCTTATGTCCCGGTGGGAGCTACTCCCTTAGAAGGGGCCGAGGACAACGGTATGGACGTC	ARDGSYVPVGATPLEGAEDNGMDV	289	360	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	104	10	0	91.2
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	276	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  S  F  T 
                    Query_6446   1    CAGGTGCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTTTCCTGCAAGGCGTCTGGATACAGCTTCACC  90
V  93.2% (276/296)  IGHV1-46*01  1    ..............G........G...............................A...............A..........C.......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  H  Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  H 
                    Query_6446   91   AATCACTATGTGCACTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGTCAC  180
V  93.2% (276/296)  IGHV1-46*01  91   .GCT.....A...............................G............................................CT..  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  T  T  V  Y  M  E  L  R  S  L  R  S  E  D 
                    Query_6446   181  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACAACCACAGTGTACATGGAACTACGTAGCCTGAGATCTGAGGAC  270
V  93.2% (276/296)  IGHV1-46*01  181  ...............................................G.G......C........G..GA.C..................  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------------------CDR3-IMGT------------------------------>
                                       T  A  V  Y  Y  C  A  R  D  G  S  Y  V  P  V  G  A  T  P  L  E  G  A  E  D  N  G  M  D  V 
                    Query_6446   271  ACGGCCGTGTACTACTGTGCGAGAGATGGGTCTTATGTCCCGGTGGGAGCTACTCCCTTAGAAGGGGCCGAGGACAACGGTATGGACGTC  360
V  93.2% (276/296)  IGHV1-46*01  271  ...........T..............----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (12/12)   IGHD1-26*01  7    ------------------------------------------............------------------------------------  18
J  100.0% (47/47)   IGHJ6*02     16   ----------------------------------------------------------------------------..............  29

                                                                       
                                       W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6446   361  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  393
J  100.0% (47/47)   IGHJ6*02     30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41130072


Query= Query_341453

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            344     6e-97
IGHJ6*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AGGAGACTTCTAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAAGGAGACTTCTATTACTACTACTACACTTTGGACGTC	AREGDFYYYYYTLDV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	24	0	0	100
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	21	3	0	87.5
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	232	226	6	0	97.4


Alignments

                                     <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                        A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  
                    Query_6447  14   GTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTA  103
V  97.4% (226/232)  IGHV3-9*01  65   ..........................................................................................  154
                                        A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  

                                     ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                     S  W  N  S  D  T  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_6447  104  GTTGGAACAGTGATACCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGC  193
V  97.4% (226/232)  IGHV3-9*01  155  .......T....G..G..........................................................................  244
                                     S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                     -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                     Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  R  E  G  D  F  Y  Y  Y  Y  Y  T  L  D  V  
                    Query_6447  194  AAATGAATAGTCTGAGACCTGAGGACACGGCCTTGTATTACTGTGCAAGAGAAGGAGACTTCTATTACTACTACTACACTTTGGACGTCT  283
V  97.4% (226/232)  IGHV3-9*01  245  .......C.........G..............................A...--------------------------------------  296
                                     Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                                         
J  94.7% (54/57)    IGHJ6*02    6    -----------------------------------------------------------------............GG.A.........  30

                                                                     
                                     W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6447  284  GGGGCCAAGGGACCACGGTCACCGTCTCCTCA  315
J  94.7% (54/57)    IGHJ6*02    31   ................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_277649

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           248     8e-68
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	ARGLLIEDPNYVWGSFRRNHNCYTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	92	22	0	80.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	201	43	0	82.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  R  L  E 
                    Query_6448   1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGAGACTGGAG  90
V  82.4% (201/244)  IGHV4-59*01  49   ..................A....C.......G.......A...G..........AG....A.C........C.......A.G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_6448   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  82.4% (201/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  N  Y 
                    Query_6448   181  CAGTTGTCTCTCAACCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCAACTAT  270
V  82.4% (201/244)  IGHV4-59*01  229  .....C..C..G..G....G.TCT.....................GT.....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_6448   271  GTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  94.7% (36/38)    IGHJ3*01     13   --------------------------------------...................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_90657

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            363     1e-102
IGHD1-1*01                                                                                            14.1    8.2   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTATGGCCCG	CAACTGG	GTC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTATGGCCCGCAACTGGGTCTTGAGTAC	ARDYGPQLGLEY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  V  A  S  G  F  T  F  S  R  S  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6449  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACGTTTAGTAGAAGTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-7*01  47   .....................C...............C........CTA.........................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6449  91   AGTGGGTGGCCAACATAAAACAAGATGGAAGTGAAAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  96.4% (241/250)  IGHV3-7*01  137  ...................G..............G......................................................A  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                     E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  G  P  Q  L  G  
                    Query_6449  181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTATGGCCCGCAACTGGGTC  270
V  96.4% (241/250)  IGHV3-7*01  227  ....C.................................................................--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-1*01  5    --------------------------------------------------------------------------------.......---  11

                                     ------->                                  
                                     L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6449  271  TTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.6% (41/42)    IGHJ4*02    7    ....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_90654

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           361     4e-102
IGHD3-10*01                                                                                           12.2    31    
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TCGGGG	GGGGGCCGAGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGGGGGGGGCCGAGTACTACTTTGACTAC	ARDRGGAEYYFDY	239	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	24	0	0	100
FR3-IMGT	125	238	114	114	0	0	100
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	233	232	1	0	99.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 
                    Query_6450   14   TGTGCAGCGTCTGGATTCACCTTCAGGAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATA  103
V  99.6% (232/233)  IGHV3-33*01  64   ..........................T...............................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_6450   104  TGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTG  193
V  99.6% (232/233)  IGHV3-33*01  154  ..........................................................................................  243
                                       W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------CDR3-IMGT-------------->      
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  G  G  A  E  Y  Y  F  D  Y  W  G 
                    Query_6450   194  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGGGGGGGGGCCGAGTACTACTTTGACTACTGGGGC  283
V  99.6% (232/233)  IGHV3-33*01  244  .....................................................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (6/6)     IGHD3-10*01  14   -----------------------------------------------------......-------------------------------  19
J  100.0% (48/48)   IGHJ4*02     1    ----------------------------------------------------------------------....................  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_6450   284  CAGGGAACCCTGGTCACCGTCTCCTCAG  311
J  100.0% (48/48)   IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_90655

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           431     4e-123
IGHD6-13*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTATCGT	TATGGCAGCAGGTGGT	TACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTATCGTTATGGCAGCAGGTGGTTACCACTTTGACTTC	ARLIVMAAGGYHFDF	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	283	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  T  Y
                    Query_6451   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCACCTA  90
V  97.6% (283/290)  IGHV5-51*01  6    .............................................................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  F  D  T  R  Y  S  P
                    Query_6451   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTTTGATACCAGATATAGCCC  180
V  97.6% (283/290)  IGHV5-51*01  96   .......................................................................C............C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6451   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (283/290)  IGHV5-51*01  186  .....................................................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  R  A  R  L  I  V  M  A  A  G  G  Y  H  F  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6451   271  CATCTATTACCGTGCGAGACTTATCGTTATGGCAGCAGGTGGTTACCACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  97.6% (283/290)  IGHV5-51*01  276  ...G......T.........----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  87.5% (14/16)    IGHD6-13*01  4    ---------------------------...A.......C....-----------------------------------------------  19
J  97.8% (44/45)    IGHJ4*02     4    -----------------------------------------------.........A.................................  46

                                        
                                        
                    Query_6451   361  AG  362
J  97.8% (44/45)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_90652

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           402     3e-114
IGHD6-25*01                                                                                           14.1    9.9   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	CAGCGGC	AACCCCTGGTATCGAGATTCTCAGGCCGGCAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGCGGCAACCCCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGAC	ARHSGNPWYRDSQAGIYFDD	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	274	17	0	94.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  G  G  Y
                    Query_6452   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCCCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTCGGCGGCTA  90
V  94.2% (274/291)  IGHV5-51*01  6    .............................................T...................................TAC.A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_6452   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAACCC  180
V  94.2% (274/291)  IGHV5-51*01  96   ......................................................................................G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  R  S  L  G  T  A  Y  L  Q  W  P  S  L  K  A  S  D  T  A
                    Query_6452   181  GTCCTTTCAAGGACAGGTCACCATCTCAGTCGACAGGTCCCTCGGAACCGCCTACCTGCAGTGGCCCAGCCTGAAGGCCTCGGACACCGC  270
V  94.2% (274/291)  IGHV5-51*01  186  ......C.....C................C.....A....A..A.C..................AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  F  Y  C  A  R  H  S  G  N  P  W  Y  R  D  S  Q  A  G  I  Y  F  D  D  W  G  Q  G  T  L
                    Query_6452   271  CATGTTCTACTGTGCGAGACACAGCGGCAACCCCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGACTGGGGCCAGGGAACCCT  360
V  94.2% (274/291)  IGHV5-51*01  276  .....AT..............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  9    ---------------------.......--------------------------------------------------------------  15
J  93.6% (44/47)    IGHJ4*02     2    ------------------------------------------------------------......T...T...................  31

                                                       
                                        V  P  V  S  S  
                    Query_6452   361  GGTCCCCGTCTCCTCAG  377
J  93.6% (44/47)    IGHJ4*02     32   ....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_341450

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD2-21*01                                                                                           12.2    33   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	T	GCATACTGT	AATATCATCAACTGCTCCCCGCGGGAAGGTG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATGCATACTGTAATATCATCAACTGCTCCCCGCGGGAAGGTGTTGACTTC	AKDAYCNIINCSPREGVDF	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  Y  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6453   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTTAGCTACTATGCCATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-23*01  47   ....................................CC......AG...........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  D  G  N  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_6453   91   AGTGGGTCTCAAGTATTAGTGGCAGTGATGGTAACACATATTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-23*01  137  ...........GC.........T....G.....G......C..............................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  M  Y  H  C  A  K  D  A  Y  C  N  I  I  
                    Query_6453   181  AGAACACGCTGTATCTGCAGATGAATAGCCTGAGAGTCGAGGACACGGCCATGTATCACTGTGCGAAGGATGCATACTGTAATATCATCA  270
V  92.0% (230/250)  IGHV3-23*01  227  ...................A.....C..........C.............G.A...T..........A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.9% (8/9)      IGHD2-21*01  2    -----------------------------------------------------------------------.....T...----------  10

                                      -IMGT----------------------->                                  
                                      N  C  S  P  R  E  G  V  D  F  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_6453   271  ACTGCTCCCCGCGGGAAGGTGTTGACTTCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  333
J  95.2% (40/42)    IGHJ4*02     7    ---------------------......A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_90650

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD6-25*01                                                                                           12.2    36    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TT	AGCGGC	GAAGGTAACCTTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTAGCGGCGAAGGTAACCTTATTGACTAC	AKLSGEGNLIDY	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	72	2	0	97.3
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	297	7	6	1	0	85.7
Total	N/A	N/A	294	280	14	0	95.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_6454   4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCA  93
V  95.2% (280/294)  IGHV5-51*01  2    ..G...................................................................T...................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      R  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  Y  D  V  R  Y  
                    Query_6454   94   GGTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTATGATGTGAGATACA  183
V  95.2% (280/294)  IGHV5-51*01  92   .C.........................................................................C....ACC.......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  P  S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_6454   184  GACCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGCACCGCCTTTTTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  95.2% (280/294)  IGHV5-51*01  182  .C.....................................A.................ACC..............................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  I  Y  Y  C  A  K  L  S  G  E  G  N  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6454   274  CCGCCATTTATTACTGTGCGAAACTTAGCGGCGAAGGTAACCTTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  95.2% (280/294)  IGHV5-51*01  272  .......G.............G..---------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD6-25*01  10   --------------------------......-------------------------------------------------------  15
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_90651

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_6455   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_6455   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_6455   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_6455   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_324589

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD6-6*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTC	ATTREQLVPIFDF	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	269	18	0	93.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  L  S  S  Y
                    Query_6456   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATTTCCTGTAAGGGTTCTGGATACAGATTAAGCAGTTA  90
V  93.7% (269/287)  IGHV5-51*01  6    ......................................................C.......................C..T.C...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  E  T  K  Y  S  P
                    Query_6456   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCGTCTATCCTGGTGACTCTGAGACCAAATACAGCCC  180
V  93.7% (269/287)  IGHV5-51*01  96   C.......G..........................................G...A...................T....G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  A  S  G  T  A  F  L  Q  W  D  S  L  K  A  S  D  T  A
                    Query_6456   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGGCCAGCGGCACCGCCTTCCTGCAGTGGGACAGCCTGAAGGCCTCGGACACCGC  270
V  93.7% (269/287)  IGHV5-51*01  186  .......C.............................T...T.A.........A..........AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_6456   271  CATGTATTACTGTGCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  356
V  93.7% (269/287)  IGHV5-51*01  276  .................---------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------.......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_324588

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           357     1e-100
IGHD7-27*01                                                                                           16.1    2.2   
IGHJ2*01                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD7-27*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCAA	CCC	ACTGGGGA	TCGGGGGCGTC	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACCCACTGGGGATCGGGGGCGTCCTTCGATCTC	ATHWGSGASFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	237	9	0	96.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6457   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAACTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.3% (237/246)  IGHV3-74*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  E  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6457   91   TGTGGGTCTCACGTATCAATAGTGATGAGAGTAGCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.3% (237/246)  IGHV3-74*01  137  ................T..........G...........G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  F  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  T  H  W  G  S  G  A  S  
                    Query_6457   181  AGAACACGCTGTTCCTGCAGATGAACGGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAACCCACTGGGGATCGGGGGCGTCCT  270
V  96.3% (237/246)  IGHV3-74*01  227  ............AT.....A......A.........................G.............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD7-27*01  4    ---------------------------------------------------------------------........-------------  11
J  100.0% (44/44)   IGHJ2*01     10   ----------------------------------------------------------------------------------------..  11

                                      ------->                                  
                                      F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6457   271  TCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  312
J  100.0% (44/44)   IGHJ2*01     12   ..........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_277643

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           344     6e-97
IGHD2-21*01                                                                                           10.3    122  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TGTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTGTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFVQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  I  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  N 
                    Query_6458   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCATCATCAGGAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGAAC  90
V  94.4% (234/248)  IGHV4-31*03  49   ...............................G.TC......C....................C........................GG.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_6458   91   CTGGAGTGGATTGGGTACATCTATTATAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCT  180
V  94.4% (234/248)  IGHV4-31*03  139  ..........................C.......G.............C......................C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  V  Q  E 
                    Query_6458   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGGTCTTCTCTATTTGTCCAAGAA  270
V  94.4% (234/248)  IGHV4-31*03  229  ..........................C.............................T...........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD2-21*01  22   ---------------------------------------------------------------------------.....----------  26

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6458   271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_341451

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           374     9e-106
IGHD4-17*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GGTCATC	GACTACGGTGACTAC	GTCG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGAGGTCATCGACTACGGTGACTACGTCGACTTCTACTATTACGGAATGGACGTC	ATEVIDYGDYVDFYYYGMDV	290	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	175	30	25	5	0	83.3
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	297	8	7	1	0	87.5
Total	N/A	N/A	297	268	29	0	90.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  K  P  G  E  S  L  R  V  S  C  A  A  S  G  L  S  F  K  N  A
                    Query_6459   1    GCAGCTGGTGCAGTCTGGGGGAGGCTTGGTTAAGCCTGGAGAGTCCCTCAGAGTCTCCTGTGCAGCCTCTGGACTCAGCTTCAAAAACGC  90
V  90.2% (268/297)  IGHV3-15*01  6    ..........G...................A........G.G......T...C....................T...CT....GT.....  95
                                        Q  L  V  E  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A

                                      ---><--------------------FR2-IMGT---------------------><----------CDR2-IMGT---------><----
                                        W  M  T  W  V  R  Q  S  P  G  K  G  L  E  W  V  G  R  I  R  S  R  T  D  G  G  T  A  D  Y
                    Query_6459   91   CTGGATGACCTGGGTCCGCCAGTCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGCATTAGAAGCAGAACCGATGGTGGGACGGCAGACTA  180
V  90.2% (268/297)  IGHV3-15*01  96   ........G.............G...............................T....A.....A...T...........AA.......  185
                                        W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y

                                      ------------------------------------------------FR3-IMGT----------------------------------
                                        A  A  P  V  K  G  R  F  I  I  S  R  D  E  S  K  T  T  L  Y  L  Q  M  N  S  L  K  T  E  D
                    Query_6459   181  CGCTGCACCCGTGAAAGGCAGATTCATCATCTCAAGAGATGAATCGAAGACCACCCTTTATCTTCAAATGAACAGCCTGAAAACCGAGGA  270
V  90.2% (268/297)  IGHV3-15*01  186  ..........................C...............T..A..A.A...G..G.....G..........................  275
                                        A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D

                                      ------------------><-------------------------CDR3-IMGT------------------------>           
                                        T  A  V  Y  Y  C  A  T  E  V  I  D  Y  G  D  Y  V  D  F  Y  Y  Y  G  M  D  V  W  G  Q  G
                    Query_6459   271  CACAGCCGTCTATTACTGTGCCACAGAGGTCATCGACTACGGTGACTACGTCGACTTCTACTATTACGGAATGGACGTCTGGGGCCAAGG  360
V  90.2% (268/297)  IGHV3-15*01  276  .........G.........A.......---------------------------------------------------------------  302
                                        T  A  V  Y  Y  C  T  T                                                                  
D  100.0% (15/15)   IGHD4-17*01  2    ----------------------------------...............-----------------------------------------  16
J  89.8% (53/59)    IGHJ6*02     4    -----------------------------------------------------...A......C.....T....................  40

                                                            
                                        S  S  V  T  V  S  S 
                    Query_6459   361  GAGTTCGGTCACCGTCTCCTCA  382
J  89.8% (53/59)    IGHJ6*02     41   ..CCA.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_277645

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           367     6e-104
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6460   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6460   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.2% (242/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_6460   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  97.2% (242/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_6460   271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_277644

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            311     4e-87
IGHD2-21*01                                                                                           10.3    112  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCG	ATTCC	GTGCCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGATTCCGTGCCCCCTAC	ARRFRAPY	241	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  G  V  S  D  G  S  I  D  S  S  G  W  W  I  W  V  R  Q  P  P  G  K  G  L 
                    Query_6461   1    ACCCTGTCCCTCACCTGCGGTGTCTCTGATGGCTCCATCGACTCTAGTGGCTGGTGGATTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.6% (222/245)  IGHV4-4*02   49   ...................C........G..........AG.AG....AA........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  T  H  H  T  G  T  T  N  Y  N  S  S  L  Q  S  R  V  T  I  S  L  D  K  S  K 
                    Query_6461   91   GAGTGGATTGGGGAAACCCATCACACTGGGACCACCAACTACAACTCGTCCCTCCAGAGTCGAGTCACCATATCACTAGACAAGTCCAAG  180
V  90.6% (222/245)  IGHV4-4*02   139  ................T.T....T.G.....G.............C........A....................G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------CDR3-IMGT------>      
                                       N  Q  F  S  L  N  L  N  P  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  F  R  A  P  Y  W  G 
                    Query_6461   181  AATCAGTTCTCCCTAAACCTGAACCCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGCGAGGCGATTCCGTGCCCCCTACTGGGGC  270
V  90.6% (222/245)  IGHV4-4*02   229  ..C...........G..G....G.T...............................C........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (5/5)     IGHD2-21*01  24   --------------------------------------------------------------------.....-----------------  28
J  97.2% (35/36)    IGHJ4*02     11   --------------------------------------------------------------------------------..........  20

                                                                
                                       Q  G  I  L  V  T  V  S  S
                    Query_6461   271  CAGGGAATCCTGGTCACCGTCTCCTC  296
J  97.2% (35/36)    IGHJ4*02     21   .......C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_277647

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           338     5e-95
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-2*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGAGTTCCAAGATGGGCAAATC	TTGTAGTAGTCCCAGCTGCT	CTCG	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGAGTTCCAAGATGGGCAAATCTTGTAGTAGTCCCAGCTGCTCTCGCTAT	EREFQDGQIL**SQLLSL	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	129	25	22	2	1	88
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	235	14	1	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  T  Y  G  M  H  W  F  R  Q  A  P  G  K  G  L  
                    Query_6462   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCGGGATTCACCTTAAGTACCTATGGCATGCACTGGTTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-30*18  47   ............................T...........C....G................G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT-------><--------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  E  S  T  K  K  I  C  R  L  R  E  G  P  I  Q  H  L  Q  R  H  F  
                    Query_6462   91   AGTGGGTGGCAGTTATATCATATGATGAAAGTACTAAAAAAATATGCAGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAGACACTTCC  180
V  94.0% (235/250)  IGHV3-30*18  137  ...........................G.....A.-...T.C............................C..............A....  225
                                      E  W  V  A  V  I  S  Y  D  G  S  N   K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                      Q  E  H  A  V  S  A  D  E  R  P  E  S  *  R  H  G  C  L  L  L  C  E  R  E  F  Q  D  G  Q  
                    Query_6462   181  AAGAACACGCTGTATCTGCAGATGAACGGCCTGAGAGCTGAAGACACGGCTGTCTATTACTGTGCGAAAGGGAGTTCCAAGATGGGCAAA  270
V  94.0% (235/250)  IGHV3-30*18  226  ....................A......A.............G...........G................--------------------  295
                                       K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                      

                                      3-IMGT----------------------->                                  
                                      I  L  *  *  S  Q  L  L  S  L  L  G  P  G  N  P  G  H  R  L  F   
                    Query_6462   271  TCTTGTAGTAGTCCCAGCTGCTCTCGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  334
D  95.0% (19/20)    IGHD2-2*01   7    --..........A.........------------------------------------------  26
J  94.7% (36/38)    IGHJ4*02     11   --------------------------...C.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_162539

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           388     5e-110
IGHD6-6*01                                                                                            21.8    0.045 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCC	ATAGCAGCTCG	GATGGGGA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCATAGCAGCTCGGATGGGGAACTTTGACTCC	AAIAARMGNFDS	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	267	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  V  S  R  Y
                    Query_6463   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCCGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCGTCAGTAGGTA  90
V  93.4% (267/286)  IGHV1-69*01  6    ..................G.................T..........................................T....C..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        L  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  L  L  R  T  A  N  Y  A  Q
                    Query_6463   91   TCTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGATCATCCCTCTTTTAAGGACAGCAAACTACGCACA  180
V  93.4% (267/286)  IGHV1-69*01  96   .GC.................................G...........................A.C..TG.T.................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  H  E  S  T  S  T  V  Y  M  E  V  N  S  L  G  S  Q  D  T  A
                    Query_6463   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGCACGAATCCACGAGCACAGTCTACATGGAGGTGAACAGCCTGGGATCTCAGGACACGGC  270
V  93.4% (267/286)  IGHV1-69*01  186  ...............................G..................C..........C...G.......A.....G..........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  A  A  I  A  A  R  M  G  N  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6463   271  CGTGTATTACTGTGCGGCCATAGCAGCTCGGATGGGGAACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  351
V  93.4% (267/286)  IGHV1-69*01  276  ................-----------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                  
D  100.0% (11/11)   IGHD6-6*01   5    -------------------...........---------------------------------------------------  15
J  97.7% (42/43)    IGHJ4*02     4    --------------------------------------.........A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_263933

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           350     8e-99
IGHD3-22*01                                                                                           18.0    0.60 
IGHJ6*02                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTGGAG	AGTAGGGGTTAT	CCTCTG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGAGAGTAGGGGTTATCCTCTGTACGGTATGGACGTC	ARESFLESRGYPLYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6464   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  S  T  N  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6464   91   AGTGGGTCTCATCCATTAGTGGTAGTAGTACTAACATCTACTACGCTGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (237/250)  IGHV3-21*01  137  ....................A.........G.T....A........A.....A.....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  E  S  R  
                    Query_6464   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGAGAGTAGGG  270
V  94.8% (237/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD3-22*01  14   -----------------------------------------------------------------------------------.....T.  20

                                      IMGT--------------------->                                
                                      G  Y  P  L  Y  G  M  D  V  W  G  P  G  T  T  V  P  V  S  S
                    Query_6464   271  GTTATCCTCTGTACGGTATGGACGTCTGGGGCCCTGGTACGACTGTCCCCGTCTCCTC  328
D  91.7% (11/12)    IGHD3-22*01  21   .....-----------------------------------------------------  25
J  87.2% (41/47)    IGHJ6*02     15   -----------......................AA..G..C..G...A..........  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_339631

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           350     8e-99
IGHD3-3*01                                                                                            37.2    1e-06
IGHJ6*02                                                                                              108     9e-28


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	TACGATTTTTGGAGTGGTT	CAAA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTACGATTTTTGGAGTGGTTCAAAACTACTACTACTACGCTATGGACGTC	ARGGTIFGVVQNYYYYAMDV	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	22	4	0	84.6
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	126	24	22	2	0	91.7
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	246	235	11	0	95.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  N  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  
                    Query_6465   2    CCCTGTCCCTCACCTGTGCAGCCTCTGGATTCAACTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  95.5% (235/246)  IGHV3-11*01  50   .....AGA...T.....................C........................................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  Y  I  S  R  S  G  S  I  I  Y  N  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  
                    Query_6465   92   GGGTTTCATACATTAGTCGTAGTGGTAGTATCATATACAACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGA  181
V  95.5% (235/246)  IGHV3-11*01  140  .................A............C.......T...................................................  229
                                      W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><-------------------------CDR3-
                                      S  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  T  I  F  G  V  V  
                    Query_6465   182  GTTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGGGGGTACGATTTTTGGAGTGGTTC  271
V  95.5% (235/246)  IGHV3-11*01  230  AC.......A........................................................------------------------  295
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (19/19)   IGHD3-3*01   5    ----------------------------------------------------------------------...................-  23

                                      IMGT------------------------>                                 
                                      Q  N  Y  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6465   272  AAAACTACTACTACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
J  98.3% (58/59)    IGHJ6*02     4    ---...............G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_245263

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6466   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_6466   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_6466   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6466   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_185607

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           372     2e-105
IGHD6-19*01                                                                                           12.2    35    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	GCTCCAG	GGCTGG	GATT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCCAGGGCTGGGATTCTTTGACTAT	AAPGLGFFDY	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	262	24	0	91.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  A  S  G  N  T  L  T  N  N
                    Query_6467   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCGTCAGTGAAAGTTGCCTGCAAGGCATCCGGAAACACCCTCACCAACAA  90
V  91.6% (262/286)  IGHV1-46*01  6    ..................G.......................C........G...T.............T...T.....T......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  N  K  T  T  Y  A  Q
                    Query_6467   91   CTTCATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTAATAAGACAACCTATGCACA  180
V  91.6% (262/286)  IGHV1-46*01  96   ..AT..................................................................GG..GC....G...C.....  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  L  T  M  T  R  V  T  S  T  R  T  V  Y  M  E  L  S  N  L  R  S  E  D  T  A
                    Query_6467   181  GAAGTTCCAGGGCAGACTGACCATGACTAGGGTCACGTCCACGAGAACAGTCTACATGGAGCTGAGCAACCTGAGATCTGAGGACACGGC  270
V  91.6% (262/286)  IGHV1-46*01  186  ................G.C........C....A............C......................G.....................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        V  Y  Y  C  A  A  P  G  L  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_6467   271  CGTGTATTACTGCGCGGCTCCAGGGCTGGGATTCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  347
V  91.6% (262/286)  IGHV1-46*01  276  ............T...-------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                              
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------......------------------------------------------------  18
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------.........C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_245261

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           318     6e-89
IGHD3-10*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CGAGTCAAATCCTC	TGGTTCGGGGAG	GGCAAAA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCGAGTCAAATCCTCTGGTTCGGGGAGGGCAAAAACTACTTTGACCAC	AKASQILWFGEGKNYFDH	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  N  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6468   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCCGGATTCACCTTCAATAACTTTGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-30*18  47   ....................G.......T.............G..G..A...C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  Y  D  G  S  K  K  F  Y  A  D  S  L  R  G  R  F  T  I  S  R  D  S  S  
                    Query_6468   91   AGTGGCTGGCAGTTATTTCATATGATGGAAGTAAAAAGTTCTATGCAGACTCCTTGAGGGGCCGATTTACCATCTCCAGAGACAGCTCCA  180
V  90.8% (226/249)  IGHV3-30*18  137  .....G..........A.................T..A.A.............G...A.........C................AT....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  S  S  L  G  A  E  D  T  A  V  Y  Y  C  A  K  A  S  Q  I  L  W  F  
                    Query_6468   181  AGAACACACTGTATCTCCAAATGAGCAGCCTGGGCGCTGAGGACACGGCTGTCTATTATTGTGCGAAAGCGAGTCAAATCCTCTGGTTCG  270
V  90.8% (226/249)  IGHV3-30*18  227  .......G........G.......A.......A.A.................G.....C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD3-10*01  10   -----------------------------------------------------------------------------------.......  16

                                      IMGT--------------------->                                  
                                      G  E  G  K  N  Y  F  D  H  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_6468   271  GGGAGGGCAAAAACTACTTTGACCACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  330
D  100.0% (12/12)   IGHD3-10*01  17   .....-------------------------------------------------------  21
J  95.8% (46/48)    IGHJ4*02     1    ------------...........T.......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_245266

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           308     4e-86
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGGG	AGCAATGGCTGG	GGAAGGTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTATGGACGCC	ARGHRGSNGWGRYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	226	19	6	90


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_6469   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCAGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  90.0% (226/251)  IGHV4-34*01  49   .......................C..T................------....C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  H  R  G  G  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_6469   91   CTGGAATGGATTGGGGAAATCATTCACCGTGGAGGCACCAACTACAATCCGTCCCTCCAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  90.0% (226/251)  IGHV4-34*01  133  .....G................A...TA.....A.............C.........A................................  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  G  S  N  G 
                    Query_6469   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGGGAGCAATGGC  270
V  90.0% (226/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  R  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_6469   271  TGGGGAAGGTACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  93.8% (45/48)    IGHJ6*02     15   ------------------.............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_245267

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           392     2e-111
IGHD3-9*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACGCCATACGCCGGGT	TTACGATCTTTTGACTGG	N/A	TACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACGCCATACGCCGGGTTTACGATCTTTTGACTGGTACCTTGACTCC	ARGRHTPGLRSFDWYLDS	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  R  Y 
                    Query_6470   2    CAGCTGGTGCAGTCTGGAGGTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACGTTTAGCAGATAT  91
V  93.4% (270/289)  IGHV1-18*01  7    ...................C...G.....................................................C....C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  K  N  G  N  T  N  Y  A  Q 
                    Query_6470   92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTAAAAATGGTAACACAAATTACGCACAG  181
V  93.4% (270/289)  IGHV1-18*01  97   ........C....................................................C.T.C..............C..T......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  V  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  F  D  D  T  A 
                    Query_6470   182  AGGGTCCAGGGAAGAGTCACCATGACGACAGACACATCCACGAGTACAGCCTACATGGAGCTGCGGAGCCTGAGATTTGACGACACGGCC  271
V  93.4% (270/289)  IGHV1-18*01  187  .A.C.......C..............C.................C..................A............C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  F  C  A  R  G  R  H  T  P  G  L  R  S  F  D  W  Y  L  D  S  W  G  Q  G  T  L  V  T 
                    Query_6470   272  GTGTATTTCTGTGCGAGAGGACGCCATACGCCGGGTTTACGATCTTTTGACTGGTACCTTGACTCCTGGGGCCAGGGAACCCTGGTCACC  361
V  93.4% (270/289)  IGHV1-18*01  277  .......A...........-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  94.4% (17/18)    IGHD3-9*01   4    ------------------------------------.......A..........------------------------------------  21
J  95.7% (44/46)    IGHJ4*02     3    ------------------------------------------------------...T......A.........................  38

                                                
                                       V  S  S  
                    Query_6470   362  GTCTCCTCAG  371
J  95.7% (44/46)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_245264

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            385     4e-109
IGHD3-10*01                                                                                           14.1    8.7   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	G	TCGGGGA	CTCCTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCGGGGACTCCTGTTTGACTTC	ARGRGLLFDF	269	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	41	4	0	91.1
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	154	27	26	1	0	96.3
FR3-IMGT	155	268	114	107	7	0	93.9
CDR3-IMGT (germline)	269	275	7	7	0	0	100
Total	N/A	N/A	274	260	14	0	94.9


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  G  I  S  G  D  S  V  S  S  D  T  A  A  W  N  W  I  R 
                    Query_6471   2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGGCATCTCCGGGGACAGTGTCTCTAGCGACACTGCTGCTTGGAACTGGATCAGG  91
V  94.9% (260/274)  IGHV6-1*01   31   ........G...T.G......................C.........................A...G......................  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  K  S  K  W  Y  N  D  Y  A  V  S  V  K  G  R 
                    Query_6471   92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAAGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAGGGTCGA  181
V  94.9% (260/274)  IGHV6-1*01   121  ..............................................G....................................AA.....  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  I  N  S  D  T  S  K  N  Q  F  S  L  H  L  N  S  M  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_6471   182  ATAACCATCAACTCAGACACATCCAAGAACCAGTTCTCCCTGCACCTGAACTCTATGACTCCCGAGGACACGGCTGTATACTACTGTGCA  271
V  94.9% (260/274)  IGHV6-1*01   211  ............C...............................G.........G......................G..T.........  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------CDR3-IMGT--------->                                  
                                       R  G  R  G  L  L  F  D  F  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_6471   272  AGAGGTCGGGGACTCCTGTTTGACTTCTGGGGCCAGGGAATCCTGGTCACCGTCTCGTCAG  332
V  94.9% (260/274)  IGHV6-1*01   301  ....---------------------------------------------------------  304
                                       R                                                           
D  100.0% (7/7)     IGHD3-10*01  14   -----.......-------------------------------------------------  20
J  93.0% (40/43)    IGHJ4*02     6    ------------------.......A..............C...............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_339636

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            350     8e-99
IGHD3-22*01                                                                                           52.6    2e-11
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGACGGGGT	TATTACTATGATAATAGTGGTTATTACTAC	GGTCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACGGGGTTATTACTATGATAATAGTGGTTATTACTACGGTCTC	ARRRGYYYDNSGYYYGL	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	56	27	25	2	0	92.6
FR2-IMGT	57	107	51	51	0	0	100
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  A  S  I  S  S  S  H  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_6472   1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTGGTGCCTCCATCAGCAGTAGTCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  95.2% (236/248)  IGHV4-4*02   47   ..A.....TCC...A..................G................A.......................................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  N  S  
                    Query_6472   91   TGGAGTGGATTGGGGAAATCTATCATAGTGGGAACACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAACTCCA  180
V  95.2% (236/248)  IGHV4-4*02   137  .................................G...................................................G....  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  R  R  G  Y  Y  Y  D  
                    Query_6472   181  AGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCCATATATTACTGTGCGAGACGACGGGGTTATTACTATGATA  270
V  95.2% (236/248)  IGHV4-4*02   227  .........................C........................G.G...............----------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  96.7% (29/30)    IGHD3-22*01  2    -----------------------------------------------------------------------------.............  14

                                      GT-------------------->                                  
                                      N  S  G  Y  Y  Y  G  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6472   271  ATAGTGGTTATTACTACGGTCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  96.7% (29/30)    IGHD3-22*01  15   G................----------------------------------------  31
J  100.0% (35/35)   IGHJ4*02     14   ----------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_339639

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           410     1e-116
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	274	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_6473   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  95.8% (274/286)  IGHV5-51*01  6    ..................................................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  E  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  N  T  R  Y  S  P
                    Query_6473   91   CTGGATCGGCTGGGTGCGCCAGGAGCCCGGAAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTAATACCAGATACAGTCC  180
V  95.8% (274/286)  IGHV5-51*01  96   ......................AT......G.............G............................G.............C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_6473   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAGCACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  95.8% (274/286)  IGHV5-51*01  186  ....................C...................A...........................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6473   271  CGTGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.8% (274/286)  IGHV5-51*01  276  .A..............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_245269

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           308     4e-86
IGHD4-4*01                                                                                            19.9    0.15 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATCAGC	CAGTAACTAC	TCTCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCAGCCAGTAACTACTCTCGGCTAC	ARNQPVTTLGY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	245	221	24	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  T  V  S  N  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6474   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGGTCACCGTCAGTAACAACTATATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.2% (221/245)  IGHV3-53*01  47   ................................T............G......C....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  L  S  V  M  Y  S  R  G  A  T  R  Y  A  D  S  V  R  G  R  I  T  I  S  R  D  S  S  K  
                    Query_6474   91   AGTGGCTCTCAGTCATGTATAGTCGTGGAGCCACAAGGTACGCAGACTCCGTGAGGGGCCGAATCACCATCTCCAGAGACAGTTCCAAGA  180
V  90.2% (221/245)  IGHV3-53*01  137  .....G.......T..T.....CG....TAG....TAC................A.......T..................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      N  T  V  Y  L  Q  M  K  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  N  Q  P  V  T  T  L  G  
                    Query_6474   181  ACACGGTGTATCTTCAAATGAAAAACCTGAGAGTCGAGGACACGGCCGTCTATTACTGTGCGAGAAATCAGCCAGTAACTACTCTCGGCT  270
V  90.2% (221/245)  IGHV3-53*01  227  .....C................C.G........C...............G...............-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (10/10)   IGHD4-4*01   7    ------------------------------------------------------------------------..........--------  16
J  97.4% (37/38)    IGHJ4*02     11   ----------------------------------------------------------------------------------------..  12

                                      ->                                  
                                      Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_6474   271  ACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.4% (37/38)    IGHJ4*02     13   .........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_185609

Length=411
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           425     3e-121
IGHD6-13*01                                                                                           19.9    0.19  
IGHJ6*02                                                                                              114     2e-29 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TT	CAGCAGCTGG	CAAACCGGCTAACA	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCAGCAGCTGGCAAACCGGCTAACAATTACTACTACTACTACGGTCTGGACGTC	ARHSAAGKPANNYYYYYGLDV	292	354	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	72	3	0	96
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	110	4	0	96.5
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	284	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 
                    Query_6475   4    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACC  93
V  95.9% (284/296)  IGHV5-51*01  1    .....G........G..........................C................................................  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  W  I  G  W  V  R  Q  L  P  G  K  G  L  E  W  M  G  F  I  Y  P  G  D  S  H  T  K  Y 
                    Query_6475   94   AGTTACTGGATCGGCTGGGTGCGCCAGCTGCCCGGGAAAGGCCTGGAGTGGATGGGATTCATCTATCCTGGTGACTCTCATACCAAATAC  183
V  95.9% (284/296)  IGHV5-51*01  91   ..C........................A............................GA....................G......G....  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  G  L  K  A  S  D 
                    Query_6475   184  AGCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGGGCGGCCTGAAGGCCTCGGAC  273
V  95.9% (284/296)  IGHV5-51*01  181  ............C........................................................A..A.................  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><--------------------------CDR3-IMGT-------------------------->         
                                       T  A  M  Y  Y  C  A  R  H  S  A  A  G  K  P  A  N  N  Y  Y  Y  Y  Y  G  L  D  V  W  G  Q 
                    Query_6475   274  ACCGCCATGTATTACTGTGCGAGACATTCAGCAGCTGGCAAACCGGCTAACAATTACTACTACTACTACGGTCTGGACGTCTGGGGCCAA  363
V  95.9% (284/296)  IGHV5-51*01  271  ..........................----------------------------------------------------------------  296
                                       T  A  M  Y  Y  C  A  R                                                                   
D  100.0% (10/10)   IGHD6-13*01  9    ----------------------------..........----------------------------------------------------  18
J  98.4% (61/62)    IGHJ6*02     1    ----------------------------------------------------....................A.................  38

                                                              
                                       G  T  T  V  T  V  S  S 
                    Query_6475   364  GGGACCACGGTCACCGTCTCCTCA  387
J  98.4% (61/62)    IGHJ6*02     39   ........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40288536


Query= Query_185608

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           322     2e-90
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ3*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGGCCCCCC	TACTATGATCGTAGTGGTTAT	CACGAC	GATCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGACCGGCCCCCCTACTATGATCGTAGTGGTTATCACGACGATCCTTTTGATGTG	ARDRPPYYDRSGYHDDPFDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  R  D  Y  W  M  H  W  A  R  Q  V  P  G  K  G  L  
                    Query_6476   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACTTTCAGAGACTACTGGATGCACTGGGCCCGTCAAGTTCCAGGGAAGGGACTGG  90
V  91.2% (228/250)  IGHV3-74*01  47   .....................C...............C.....TAG.................T...C....C............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  G  D  G  T  G  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6476   91   TGTGGGTCTCACGTATCAATGGCGATGGCACTGGCACAAATTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.2% (228/250)  IGHV3-74*01  137  ................T...A.T.....G.G.A......GC.................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      T  N  T  L  Y  L  Q  M  T  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  R  P  P  Y  Y  D  
                    Query_6476   181  CGAATACACTGTATCTGCAAATGACCAGTCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCAAGAGACCGGCCCCCCTACTATGATC  270
V  91.2% (228/250)  IGHV3-74*01  227  A...C..G................A...........C.................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.2% (20/21)    IGHD3-22*01  5    --------------------------------------------------------------------------------.........A  14

                                      R3-IMGT------------------------>                                  
                                      R  S  G  Y  H  D  D  P  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6476   271  GTAGTGGTTATCACGACGATCCTTTTGATGTGTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
D  95.2% (20/21)    IGHD3-22*01  15   ...........-------------------------------------------------------  25
J  95.9% (47/49)    IGHJ3*01     2    -----------------...G..........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_130319

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           371     7e-105
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	ARPSSASGWHFDN	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	263	26	0	91


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_6477   1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCAGTTA  90
V  91.0% (263/289)  IGHV5-51*03  6    .........................G.............G.........................G.........C.GC..T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  *  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  E  I  R  Y  S  P
                    Query_6477   91   TTGGATCGCCTAGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGAGATTAGATATAGTCC  180
V  91.0% (263/289)  IGHV5-51*03  96   C.......G..G...............................................AT...GG.........T.CC.....C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  G
                    Query_6477   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGG  270
V  91.0% (263/289)  IGHV5-51*03  186  .............................C..A.AA........G............................................C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6477   271  CATGTATTACTGTGCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  91.0% (263/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_271729

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     1e-87
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGTATCT	TACGGTGAC	CCCACAAGTTACTCACGGTG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGGGTATCTTACGGTGACCCCACAAGTTACTCACGGTGTTGACTTC	VKGYLTVTPQVTHGVDF	237	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	19	5	0	79.2
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	243	7	6	1	0	85.7
Total	N/A	N/A	232	216	16	0	93.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  S  V  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  R  L  E  W  V  S  S  I 
                    Query_6478   12   TGTGCAGCCTCTGGATTCAGCGTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGAGGCTGGAGTGGGTCTCATCTATT  101
V  93.1% (216/232)  IGHV3-23*01  64   ...................C.T......G.....................................G.................G.....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  I  S  G  A  Y  T  Y  Y  V  D  S  V  K  G  R  L  T  I  S  R  D  S  S  K  N  T  L  Y  L 
                    Query_6478   102  AGTATTAGTGGTGCTTACACATACTACGTAGACTCCGTGAAGGGCCGGCTCACCATCTCCAGAGACAGTTCCAAGAACACGCTGTATCTG  191
V  93.1% (216/232)  IGHV3-23*01  154  ...GG........G.AG...........C...................T..................A......................  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------------CDR3-IMGT---------------
                                       Q  M  S  S  L  R  A  E  D  T  A  I  Y  Y  C  V  K  G  Y  L  T  V  T  P  Q  V  T  H  G  V 
                    Query_6478   192  CAAATGAGCAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGTGAAAGGGTATCTTACGGTGACCCCACAAGTTACTCACGGTGTT  281
V  93.1% (216/232)  IGHV3-23*01  244  .......A.........................G............C.....--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (9/9)     IGHD4-17*01  5    -----------------------------------------------------------.........----------------------  13
J  92.9% (39/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  F  W  G  L  G  T  L  A  T  V  S  S  
                    Query_6478   282  GACTTCTGGGGCCTGGGAACCCTGGCCACCGTCTCCTCAG  321
J  92.9% (39/42)    IGHJ4*02     9    ....A........A...........T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_111316

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           343     2e-96
IGHD5-12*01                                                                                           12.2    37   
IGHJ4*02                                                                                              52.6    6e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCGGATTTTCCTCTGATGGAC	GTGAATATA	TGACCCCGCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCGGATTTTCCTCTGATGGACGTGAATATATGACCCCGCTCTTTGACTTT	ARAGFSSDGREYMTPLFDF	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	9	77	69	63	6	0	91.3
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	19	5	0	79.2
FR3-IMGT	177	290	114	99	15	0	86.8
CDR3-IMGT (germline)	291	295	5	5	0	0	100
Total	N/A	N/A	287	253	34	0	88.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I  N  F 
                    Query_6479   9    CAGCTGGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGACGATCTCTTGCCAGGCTTCCGGTTACAGCTTTATCAACTTC  98
V  88.2% (253/287)  IGHV1-18*04  7    .......................G.........................A.G....C...A.......T.......C.....C..G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  A  H  R  G  D  T  K  Y  A  Q 
                    Query_6479   99   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTCGAATGGCTGGGATGGATCAGCGCGCACAGAGGTGACACAAAATATGCACAG  188
V  88.2% (253/287)  IGHV1-18*04  97   ................................A.....T..G...A................TT...AT...A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  F  L  D  V  R  S  L  R  S  D  D  T  A 
                    Query_6479   189  AGTTTCCAGGGCAGAGTCACCATGACCACAGACACACTCACGGGAACAGCGTTCCTGGACGTGAGGAGCCTGCGATCTGACGACACGGCC  278
V  88.2% (253/287)  IGHV1-18*04  187  .AGC................................TC....A.C.....C.A.A....GC...........A.................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  A  R  A  G  F  S  S  D  G  R  E  Y  M  T  P  L  F  D  F  W  G  Q  G  T  P  V 
                    Query_6479   279  GTTTATTACTGTGCGAGGGCCGGATTTTCCTCTGATGGACGTGAATATATGACCCCGCTCTTTGACTTTTGGGGCCAGGGAACCCCGGTC  368
V  88.2% (253/287)  IGHV1-18*04  277  ..G..............-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  88.9% (8/9)      IGHD5-12*01  1    ----------------------------------------...G.....-----------------------------------------  9
J  89.7% (35/39)    IGHJ4*02     5    -----------------------------------------------------------........AC................T....  35

                                              
                                       S  V  S
                    Query_6479   369  TCCGTCTC  376
J  89.7% (35/39)    IGHJ4*02     36   A.......  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_86868

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           355     3e-100
IGHD2-2*01                                                                                            14.1    8.6   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCACCA	CTATGCC	TATGCCAGCGGGGGATATG	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACCACTATGCCTATGCCAGCGGGGGATATGTTGAGTCC	ARGHHYAYASGGYVES	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  T  W  I  R  Q  H  P  G  K  A  
                    Query_6480   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGCCC  93
V  95.6% (238/249)  IGHV4-31*02  50   .....TCC...A................................................G..........................G..  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      P  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  T  S  
                    Query_6480   94   CGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCAGTAGACACGTCTA  183
V  95.6% (238/249)  IGHV4-31*02  140  T..................................................................T.C....................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  H  Y  A  Y  A  
                    Query_6480   184  AGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGGTCACCACTATGCCTATGCCA  273
V  95.6% (238/249)  IGHV4-31*02  230  .........................C..........................G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-2*01   25   ----------------------------------------------------------------------------.......-------  31

                                      T------------------>                                  
                                      S  G  G  Y  V  E  S  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_6480   274  GCGGGGGATATGTTGAGTCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  327
J  92.9% (39/42)    IGHJ4*02     7    ------------....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_111315

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           310     1e-86
IGHD3-3*01                                                                                            23.8    0.011
IGHJ5*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCTGTCCCGC	ATTATGGTTTTTGGAATGATTATT	CCAAAATCTAACTCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTGTCCCGCATTATGGTTTTTGGAATGATTATTCCAAAATCTAACTCTTTCGACACC	ARGLSRIMVFGMIIPKSNSFDT	240	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  Y  G  G  S  F  N  G  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_6481   4    CCCTGAGACTCTCCTGCTCTGTCTATGGTGGGTCGTTCAATGGTCACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  90.6% (221/244)  IGHV4-34*01  50   .....TCC...A.....G................C....G....T.............................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  S  H  S  G  D  T  N  Y  N  S  S  L  K  S  R  V  T  L  S  V  D  T  S  R  N  
                    Query_6481   94   GGATTGGGGAAATTTCTCATAGTGGAGACACCAACTACAACTCGTCCCTCAAGAGTCGAGTCACCTTGTCAGTTGACACGTCCAGGAACC  183
V  90.6% (221/244)  IGHV4-34*01  140  .............CAA..........AG.............C.......................A.A.....A..........A.....  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------------CDR3-
                                      Q  F  S  L  K  L  T  S  L  T  V  A  D  T  A  V  Y  Y  C  A  R  G  L  S  R  I  M  V  F  G  
                    Query_6481   184  AGTTCTCCCTGAAGCTGACCTCCCTGACCGTCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCCTGTCCCGCATTATGGTTTTTGGAA  273
V  90.6% (221/244)  IGHV4-34*01  230  ..................G...TG......C...............G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  83.3% (20/24)    IGHD3-3*01   3    --------------------------------------------------------------------------....C.A........G  18

                                      IMGT--------------------------->                                  
                                      M  I  I  P  K  S  N  S  F  D  T  W  G  P  G  T  L  V  T  V  S  S  
                    Query_6481   274  TGATTATTCCAAAATCTAACTCTTTCGACACCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  339
D  83.3% (20/24)    IGHD3-3*01   19   ..G.....----------------------------------------------------------  26
J  95.3% (41/43)    IGHJ5*02     9    -----------------------......C.........A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_111312

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           347     8e-98
IGHD3-16*01                                                                                           18.0    0.65 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	285	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	68	3	0	95.8
CDR1-IMGT	78	101	24	17	7	0	70.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	284	114	95	13	6	83.3
CDR3-IMGT (germline)	285	290	6	6	0	0	100
Total	N/A	N/A	290	258	26	6	89


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P  R  
                    Query_6482   7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCCGTT  96
V  89.0% (258/290)  IGHV5-51*03  5    ........................................................T.....A....T..........GC..TA..A.C.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  S  
                    Query_6482   97   ATTGGATCGGTTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGTC  186
V  89.0% (258/290)  IGHV5-51*03  95   .C........C............A..........................................G.....................C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D  T  
                    Query_6482   187  CGGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACACTG  270
V  89.0% (258/290)  IGHV5-51*03  185  ..T.....C.A...................C...C........CAGCACC.C...............C..C.................C.  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                  
                                      A  I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6482   271  CCATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  360
V  89.0% (258/290)  IGHV5-51*03  275  ....G........T......----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD3-16*01  18   ---------------------........T...---------------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    ----------------------------------------......T......G.................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_332918

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACGGTAAAGGG	GGTTATTACT	GT	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACGGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTACGGACGTC	ARTVKGVITVYQYFATDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  R  P  G  K  G  L  E 
                    Query_6483   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCGCCCAGGGAAGGGACTGGAG  90
V  91.4% (222/243)  IGHV4-34*01  49   ................................G...T..................G..............C............G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  I  S  L  D  M  S  K  N 
                    Query_6483   91   TGGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGAGTCTCCATATCATTAGACATGTCCAAGAAT  180
V  91.4% (222/243)  IGHV4-34*01  139  .............................C..................C..A...........A........G......C.........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  I  S  V  R  V  T  S  V  T  A  A  D  T  A  T  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y 
                    Query_6483   181  CAGATCTCCGTGAGGGTGACGTCTGTGACCGCCGCGGACACGGCTACTTATTACTGTGCGAGAACGGTAAAGGGGGTTATTACTGTCTAC  270
V  91.4% (222/243)  IGHV4-34*01  229  ...T.....C...A.C...GC........................GTG...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  20   --------------------------------------------------------------------------..........------  29
J  91.4% (53/58)    IGHJ6*02     5    --------------------------------------------------------------------------------------....  8

                                      -------------------->                                 
                                       Q  Y  F  A  T  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6483   271  CAGTACTTCGCTACGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  91.4% (53/58)    IGHJ6*02     9    T.C....A..G..T........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_111310

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           302     3e-84
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGACC	ARGDYDIGWT	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	218	25	0	89.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  L  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E  
                    Query_6484   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCCTTACTCACTACTGGAGCTGGATTCGGCAGCCCCCAGGGAACGGACTGGAGT  93
V  89.7% (218/243)  IGHV4-59*01  50   .....TCC...A..........................AG..G.T................C.................G..........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  D  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N  
                    Query_6484   94   GGATTGGAGATATCTATTACAGTGGGACCACCACTTATAACCCTTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAACC  183
V  89.7% (218/243)  IGHV4-59*01  140  .......GT..................G.....AC..C.....C..................A...............C......G....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------CDR3-IMGT--------->    
                                      R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  T  W  
                    Query_6484   184  GCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGACCTGGG  273
V  89.7% (218/243)  IGHV4-59*01  230  AG............C...............................G.....C..........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (7/7)     IGHD3-16*01  3    ------------------------------------------------------------------.......-----------------  9
J  100.0% (36/36)   IGHJ5*02     16   ------------------------------------------------------------------------------------......  21

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_6484   274  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (36/36)   IGHJ5*02     22   ..............................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_111311

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           283     1e-78
IGHD6-6*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTCTG	CTTAGTGGGTGGCCGTG	ATAGCAGCTCGTCC	GGCCTGAG	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TTAGTGGGTGGCCGTGATAGCAGCTCGTCCGGCCTGAGCGTC	LVGGRDSSSSGLSV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	241	113	102	11	0	90.3
Total	N/A	N/A	241	211	30	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  G  S  G  F  I  F  S  D  Y  G  V  Q  W  V  C  Q  A  T  G  K  G  L  
                    Query_6485   1    GGTCCCTGAGACTCTCCTGTTCAGGCTCTGGATTCATCTTCAGTGACTATGGTGTACAGTGGGTCTGCCAGGCTACAGGAAAGGGACTGG  90
V  87.6% (211/241)  IGHV3-64*05  47   ........................C...........C.......AG.....C.A.G..C......C........C....G..........  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  A  I  G  G  H  G  T  T  T  Y  Y  T  D  P  L  K  G  R  F  I  V  S  R  D  N  S  
                    Query_6485   91   AATTTGTTTCGGCTATTGGTGGTCATGGGACTACCACATACTACACAGACCCACTGAAGGGCAGATTCATCGTCTCCAGAGACAATTCCA  180
V  87.6% (211/241)  IGHV3-64*05  137  ...A......A......A..A..A.....GG..G..........G.....T..G...............C.A..................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  V  Y  L  Q  M  S  N  L  R  I  E  D  T  A  V  Y  F  C  L  V  G  G  R  D  S  S  S  
                    Query_6485   181  AGAACACGGTGTATCTTCAAATGAGCAATCTGAGAATTGAGGACACGGCTGTGTATTTCTGCTTAGTGGGTGGCCGTGATAGCAGCTCGT  270
V  87.6% (211/241)  IGHV3-64*05  227  ........C.....G............G.......GC....................A...-----------------------------  287
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y                                
D  100.0% (14/14)   IGHD6-6*01   5    ------------------------------------------------------------------------------............  16

                                      ------------->                                 
                                      S  G  L  S  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6485   271  CCGGCCTGAGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
D  100.0% (14/14)   IGHD6-6*01   17   ..---------------------------------------------  18
J  100.0% (37/37)   IGHJ6*02     26   ----------.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_332915

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHJ1*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	N/A	TGACGCCCTAA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGACGCCCTAAAC	AKDDALN	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  N  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6486   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATAACTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   .........................................AGC.G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  G  V  T  T  Y  Y  A  D  S  V  K  G  R  F  T  T  S  R  D  N  S  
                    Query_6486   91   AGTGGGTCTCAACCATTAGTGGTAGTGGAGTTACCACATACTATGCAGACTCCGTAAAGGGCCGGTTCACCACCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-23*01  137  ...........G.T..............T.G..G.........C...........G................T.................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  D  A  L  N  W  G  
                    Query_6486   181  AGAGCACGCTGTACCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTTTATTACTGCGCGAAAGATGACGCCCTAAACTGGGGCC  270
V  92.8% (232/250)  IGHV3-23*01  227  ...A.........T..........................G...........A........T........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
J  100.0% (36/36)   IGHJ1*01     17   ---------------------------------------------------------------------------------.........  25

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_6486   271  AGGGCACCCTGGTCACCGTCTCCTCAG  297
J  100.0% (36/36)   IGHJ1*01     26   ...........................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_332914

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           364     5e-103
IGHD2-21*02                                                                                           23.8    0.011 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGGCTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGGCTGCAAACTACTTTGACTAC	ARAIVVLAANYFDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	113	1	0	99.1
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_6487   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  96.8% (241/249)  IGHV4-31*02  50   .....TCC...A....................................G.........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  
                    Query_6487   94   TGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCTA  183
V  96.8% (241/249)  IGHV4-31*02  140  ..............T......A...........................................G........................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  A  A  
                    Query_6487   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGGCTGCAA  273
V  96.8% (241/249)  IGHV4-31*02  230  .....................................................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD2-21*02  5    ----------------------------------------------------------------------..........G..A....--  22

                                      ------------->                                  
                                      N  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_6487   274  ACTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  321
J  97.9% (47/48)    IGHJ4*02     1    ..........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_332917

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_6488  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01  49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_6488  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01  139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_6488  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01  229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01  13   ----------------------------------------------------------------------.....C..G...--------  24

                                     ----------->                                  
                                      G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_6488  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02    6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_86861

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     1e-109
IGHD1-1*01                                                                                            10.3    134   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGA	ACAAC	CCGTCCCGATA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACCCGTCCCGATATTTGACTTC	ATTREQPVPIFDF	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	267	20	0	93


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  L  T  C  Y
                    Query_6489   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGCAAGGGCTCTGGATATAGCTTAACCTGTTA  90
V  93.0% (267/287)  IGHV5-51*01  6    ............................................................T.....T........C.....T...A.C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  V  P  G  K  G  L  E  W  I  G  I  I  Y  P  A  D  S  E  T  K  Y  S  P
                    Query_6489   91   TTGGATCGCCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATTGGGATCATCTATCCTGCTGACTCTGAAACCAAATACAGCCC  180
V  93.0% (267/287)  IGHV5-51*01  96   C.......G.............A.........................G................G.........T....G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  S  S  S  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6489   181  GTCCTTCCAAGGCCAGGTCACCATCTCGGCCGACAAGTCCAGCAGCTCCGCCTTCTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.0% (267/287)  IGHV5-51*01  186  ...........................A.............T....A......A.C..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        I  Y  Y  C  A  T  T  R  E  Q  P  V  P  I  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6489   271  CATATATTATTGTGCGACGACTAGAGAACAACCCGTCCCGATATTTGACTTCTGGGGGCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  93.0% (267/287)  IGHV5-51*01  276  ...G.....C.......---------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                       
D  100.0% (5/5)     IGHD1-1*01   4    ---------------------------.....------------------------------------------------------  8
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------.......A......C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_86866

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           318     6e-89
IGHD3-16*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_6490   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  90.8% (226/249)  IGHV4-61*01  49   .......................C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  *  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S 
                    Query_6490   91   CTGGGGTAGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  90.8% (226/249)  IGHV4-61*01  139  ....A..G......GT............G......CAC..A.........................G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y 
                    Query_6490   181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTAT  270
V  90.8% (226/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------------.....  28

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_6490   271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
D  100.0% (7/7)     IGHD3-16*02  29   ..--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_111318

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_6491   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_6491   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_6491   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_6491   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_111319

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           291     6e-81
IGHD2-15*01                                                                                           12.2    33   
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGCCCACGGTTTTCTACGACAGTGAC	GGTGGAAGC	CGATTCCTT	GACGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATGGGCCCACGGTTTTCTACGACAGTGACGGTGGAAGCCGATTCCTTGACGCC	VRDGPTVFYDSDGGSRFLDA	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  H  F  T  F  S  S  Y  V  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_6492   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCCATTTCACCTTCAGTAGCTATGTTATGCACTGGGTCCGCCAGGCTTCAGGCAAGGGGCTGG  90
V  87.2% (218/250)  IGHV3-30*04  47   ............................TGGA...................C......................C...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  S  I  S  Y  D  G  N  D  I  D  S  A  D  S  V  R  G  R  F  T  I  S  R  D  N  Y  
                    Query_6492   91   AGTGGCTGGCTTCCATATCATATGATGGAAATGACATCGACTCCGCAGACTCCGTGCGGGGCCGATTCACCATCTCCAGAGACAATTACA  180
V  87.2% (218/250)  IGHV3-30*04  137  .....G....AGTT................G.A.T.AAT...A.............AA.............................C..  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  D  I  L  Y  L  Q  M  D  S  L  R  G  D  D  T  A  V  Y  Y  C  V  R  D  G  P  T  V  F  Y  
                    Query_6492   181  AGGACATACTATATCTGCAAATGGACAGCCTGAGAGGTGACGACACGGCTGTCTATTATTGTGTAAGAGATGGGCCCACGGTTTTCTACG  270
V  87.2% (218/250)  IGHV3-30*04  227  ..A...CG..G............A............C...G...........G.....C....CG.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      D  S  D  G  G  S  R  F  L  D  A  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6492   271  ACAGTGACGGTGGAAGCCGATTCCTTGACGCCTGGGGCCAGGGAACCCTCGTCACCGTCTCCTCAG  336
D  88.9% (8/9)      IGHD2-15*01  14   --------.....T...-------------------------------------------------  22
J  95.0% (38/40)    IGHJ5*02     12   --------------------------...C...................G................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_349661

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           353     9e-100
IGHD2-15*01                                                                                           12.2    32    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAT	TAGCTG	TATCCGCGCCCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTAGCTGTATCCGCGCCCTACTACTTTGACTAC	ARRLAVSAPYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  T  N  S  N  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_6493   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCACCAATAGTAATTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.2% (238/250)  IGHV4-39*01  49   ...............................G........G..G.....G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_6493   91   CTGGAGTGGATTGCGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  95.2% (238/250)  IGHV4-39*01  139  .............G..................................................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  V  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  R  L  A  V  S  A  P 
                    Query_6493   181  AAGAACCAGTTCTCCCTGAGGGTGACCTCTGTGACCGCCGCAGACACGGCTCTATATTACTGTGCGAGACGATTAGCTGTATCCGCGCCC  270
V  95.2% (238/250)  IGHV4-39*01  229  ...................A.C...G.........................G.G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-15*01  19   -------------------------------------------------------------------------......-----------  24

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  S  L  V  A  V  S  S  
                    Query_6493   271  TACTACTTTGACTACTGGGGCCAGGGATCCCTGGTCGCCGTCTCCTCAG  319
J  95.8% (46/48)    IGHJ4*02     1    -..........................A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_335031

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           347     7e-98
IGHD3-9*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTCGGTTGGCGTGGAAACTAT	TATTTTGAC	CTG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTCGGTTGGCGTGGAAACTATTATTTTGACCTG	ARDFGWRGNYYFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  E  M  N  W  V  R  Q  T  P  G  R  G  L  
                    Query_6494   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACTTATGAAATGAACTGGGTCCGCCAGACTCCAGGGAGGGGGCTGG  90
V  94.4% (236/250)  IGHV3-48*03  47   .............................................G.........................G.........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  F  I  S  T  S  G  S  T  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6494   91   AGTGGATTTCATTTATTAGTACTAGTGGAAGTACTAAATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-48*03  137  .....G......AC.......G......T.....C.T.....................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  Q  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  G  W  R  G  N  
                    Query_6494   181  AAAACTCACAGTATTTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATTTCGGTTGGCGTGGAAACT  270
V  94.4% (236/250)  IGHV3-48*03  227  .G.......T....C........A..............................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ------------->                                  
                                      Y  Y  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6494   271  ATTATTTTGACCTGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (9/9)     IGHD3-9*01   10   --.........-------------------------------------  18
J  100.0% (34/34)   IGHJ4*02     15   --------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_237447

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           313     1e-87
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCG	ACGGTGAC	ACCGAGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACGGTGACACCGAGAATGACTAT	AADGDTENDY	239	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	48	3	0	94.1
CDR2-IMGT	101	124	24	23	1	0	95.8
FR3-IMGT	125	238	114	106	8	0	93
CDR3-IMGT (germline)	239	241	3	3	0	0	100
Total	N/A	N/A	228	214	14	0	93.9


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  L  T  F  S  S  F  G  M  Y  W  V  R  Q  P  P  G  K  G  L  E  W  V  A  V  I 
                    Query_6495   14   TGTGCAGCGTCTGGACTCACCTTCAGTAGCTTTGGCATGTACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTCATA  103
V  93.9% (214/228)  IGHV3-33*01  64   ...............T...............A.......C..............G...............................T...  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       W  Y  D  G  S  K  K  Y  Y  T  D  S  V  K  G  R  F  I  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_6495   104  TGGTATGATGGAAGTAAGAAATACTATACAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCAAGAACACGTTGTATCTG  193
V  93.9% (214/228)  IGHV3-33*01  154  .................T.........G........................C............................C........  243
                                       W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><----------CDR3-IMGT--------->               
                                       Q  M  N  S  L  R  V  D  D  T  A  V  Y  F  C  A  A  D  G  D  T  E  N  D  Y  W  G  Q  G  T 
                    Query_6495   194  CAGATGAACAGCCTGAGAGTCGACGACACGGCTGTCTATTTCTGTGCGGCCGACGGTGACACCGAGAATGACTATTGGGGCCAGGGAACC  283
V  93.9% (214/228)  IGHV3-33*01  244  ..A................C...G...........G....A.......------------------------------------------  291
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  100.0% (8/8)     IGHD4-17*01  6    ----------------------------------------------------........------------------------------  13
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------......C...............  29

                                                         
                                       L  V  T  V  S  S  
                    Query_6495   284  CTGGTCACCGTCTCCTCAG  302
J  97.6% (40/41)    IGHJ4*02     30   ...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_175191

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            363     1e-102
IGHD3-22*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATACCTGACCC	ACTATGATAGTAGTGGTTATT	CCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATACCTGACCCACTATGATAGTAGTGGTTATTCCCCCTACTTTGACTAC	AKYLTHYDSSGYSPYFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	56	27	27	0	0	100
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	21	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  S  P  G  K  G  
                    Query_6496   1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGC  90
V  97.2% (239/246)  IGHV4-4*02   47   ..A.....TCC...A...........................................................C...............  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  
                    Query_6496   91   TGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCA  180
V  97.2% (239/246)  IGHV4-4*02   137  ..........................................................................................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  Y  L  T  H  Y  D  S  
                    Query_6496   181  AGAACCAGTTCTCCCTAAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAAATACCTGACCCACTATGATAGTA  270
V  97.2% (239/246)  IGHV4-4*02   227  ................G.................................................------------------------  292
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (21/21)   IGHD3-22*01  6    ------------------------------------------------------------------------------............  17

                                      IMGT--------------------->                                  
                                      S  G  Y  S  P  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6496   271  GTGGTTATTCCCCCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (21/21)   IGHD3-22*01  18   .........---------------------------------------------------  26
J  100.0% (47/47)   IGHJ4*02     2    -------------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_271726

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-22*01                                                                                           21.8    0.041
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGCGGACGTT	TTATTATGATACTAGTG	ATCCC	GATGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGCGGACGTTTTATTATGATACTAGTGATCCCGATGTTTTTGCTATC	ATRTFYYDTSDPDVFAI	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6497   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCGACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  94.7% (233/246)  IGHV3-23*01  47   ............................................AG.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  G  R  S  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  S  S  
                    Query_6497   91   AATGGGTCTCAACTATTAGCGGTAGTGGTCGCAGCACATATTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAGTTCCA  180
V  94.7% (233/246)  IGHV3-23*01  137  .G.........G.......T.........G.T........C..............................A............A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  T  R  T  F  Y  Y  D  T  
                    Query_6497   181  AGAACACGCTGTTTCTGCAAATGAACAGCCTGAGAGCCGGGGACACGGCCGTATATTACTGTGCGACGCGGACGTTTTATTATGATACTA  270
V  94.7% (233/246)  IGHV3-23*01  227  ............A..........................A..........................------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  88.2% (15/17)    IGHD3-22*01  4    ----------------------------------------------------------------------------...C.......G..  17

                                      GT-------------------->                                  
                                      S  D  P  D  V  F  A  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6497   271  GTGATCCCGATGTTTTTGCTATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  327
D  88.2% (15/17)    IGHD3-22*01  18   ...------------------------------------------------------  20
J  95.9% (47/49)    IGHJ3*02     2    --------....C.....A......................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_80089

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           302     3e-84
IGHD6-13*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TACTGG	GCAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATACTGGGCAGCAGCTGACTGACTAC	ARDTGQQLTDY	276	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	275	147	110	4	33	74.8
CDR3-IMGT (germline)	276	283	8	7	1	0	87.5
Total	N/A	N/A	283	240	10	33	84.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6498   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  84.8% (240/283)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  D  S  P  R  Y  Y  A  D  S  V  K  G  R  F  T  Y  Y  A  D  S  V  
                    Query_6498   91   AGTGGGTCTCATCCATTAGTAGTAGTGATAGTCCCAGATATTACGCAGACTCAGTGAAGGGCCGATTCACCTATTATGCAGACTCAGTGA  180
V  84.8% (240/283)  IGHV3-21*01  137  ..........................AG....TA..T...C...---------------------------------.............  193
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y                                   A  D  S  V  

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                      K  G  R  F  T  I  S  R  D  D  A  K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  
                    Query_6498   181  AGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATT  270
V  84.8% (240/283)  IGHV3-21*01  194  ..........................A..........C...............................C....................  283
                                      K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-----------CDR3-IMGT----------->                                  
                                      Y  C  A  R  D  T  G  Q  Q  L  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6498   271  ACTGTGCGAGGGATACTGGGCAGCAGCTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
V  84.8% (240/283)  IGHV3-21*01  284  ..........A..-----------------------------------------------------------  296
                                      Y  C  A  R                                                              
D  100.0% (10/10)   IGHD6-13*01  8    -------------------..........-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_240569

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            322     2e-90
IGHD5-18*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	N/A	TGGATACAACTATGG	GAGTGTCCCGGCGGGCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTGGATACAACTATGGGAGTGTCCCGGCGGGCATTGACTAC	AGYNYGSVPAGIDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	242	2	2	0	0	100
Total	N/A	N/A	242	224	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  V  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_6499   1    ACCCTGTCCCTCACCTGCGCTGTTTCTGGTGTCTCCATCAGTAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  92.6% (224/242)  IGHV4-4*02   49   .......................C.......G.........C................................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  M  Y  H  G  G  T  T  N  Y  K  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K 
                    Query_6499   91   GAGTGGATTGGGGAAATGTACCATGGTGGGACCACCAACTACAAGCCGTCCCTCAAGAGTCGGGTCTCCATATCCGTGGACACGTCCAAG  180
V  92.6% (224/242)  IGHV4-4*02   139  .................C..T...A......G............C.................A...A.......A..A....A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  G  Y  N  Y  G  S  V  P  A 
                    Query_6499   181  AACCAGTTCTCCCTGACGCTGACCTCTGTGACCGCCGCGGACACGGCCATTTATTATTGTGCTGGATACAACTATGGGAGTGTCCCGGCG  270
V  92.6% (224/242)  IGHV4-4*02   229  ................A.....G.........................G.G.....C.....----------------------------  290
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  93.3% (14/15)    IGHD5-18*01  2    --------------------------------------------------------------........G......-------------  16

                                      ----------->                                  
                                       G  I  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_6499   271  GGCATTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  316
J  97.6% (41/42)    IGHJ4*02     7    ----....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_80082

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           349     2e-98
IGHD5-12*01                                                                                           18.0    0.60 
IGHJ2*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGAAATGTATGAT	TATAGTGGC	ACAATATAT	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGAAATGTATGATTATAGTGGCACAATATATTGGTACTTCGATCTC	ARQEMYDYSGTIYWYFDL	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  S  R  S  Y  P  W  G  W  V  R  Q  P  P  R  K  G 
                    Query_6500   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGCAGTAGGAGCTACCCCTGGGGCTGGGTCCGCCAGCCCCCACGGAAGGGG  90
V  94.4% (237/251)  IGHV4-39*01  49   ......................................C........T..T...TA..........A..............G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  N  S  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  H  T  S 
                    Query_6500   91   CTGGAGTGGATTGGGACTATCTATAATAGTGGGAGGACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTACACACGTCG  180
V  94.4% (237/251)  IGHV4-39*01  139  ................G.......T..........C.............................................G.......C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       N  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  E  M  Y  D  Y  S 
                    Query_6500   181  AACAACCAGTTCTCCCTGCAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACAAGAAATGTATGATTATAGT  270
V  94.4% (237/251)  IGHV4-39*01  229  ..G...............A....................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD5-12*01  6    ------------------------------------------------------------------------------------......  11

                                      -IMGT--------------------->                                  
                                       G  T  I  Y  W  Y  F  D  L  W  G  R  G  S  L  V  T  V  S  S  
                    Query_6500   271  GGCACAATATATTGGTACTTCGATCTCTGGGGCCGTGGCTCCCTGGTCACTGTCTCCTCAG  331
D  100.0% (9/9)     IGHD5-12*01  12   ...----------------------------------------------------------  14
J  98.0% (48/49)    IGHJ2*01     5    ------------...........................A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_80080

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         297     8e-83
IGHD2-15*01                                                                                           19.9    0.17 
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GGAGAGGGCTGTCGCGCTT	TTGTAGTGCTGGT	TCCTGCGAACTCTC	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGGGAGAGGGCTGTCGCGCTTTTGTAGTGCTGGTTCCTGCGAACTCTCCGGTATGGACGTC	ATGRGLSRFCSAGSCELSGMDV	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	220	30	0	88


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  V  V  S  G  G  S  I  T  S  G  A  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_6501     1    ACCCTGTCCCTCACCTGCGTTGTCTCTGGTGGCTCCATTACCAGTGGGGCTTCCTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  88.0% (220/250)  IGHV4-30-4*01  49   ..................AC..................C.G......T.A..A.....................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  N  I  H  H  S  G  N  T  Y  Y  N  P  S  L  N  S  R  I  T  I  S  I  D  R  S 
                    Query_6501     91   CTGGAGTGGATTGGGAACATCCATCACAGCGGGAACACCTACTACAACCCGTCCCTCAACAGTCGGATTACCATATCCATAGATAGGTCC  180
V  88.0% (220/250)  IGHV4-30-4*01  139  ...............T.....T..T....T....G........................G.....AG..........AG....C.C....  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------------
                                         K  N  Q  V  P  L  N  L  N  S  A  T  V  A  D  T  A  V  Y  Y  C  A  T  G  R  G  L  S  R  F 
                    Query_6501     181  AAAAACCAGGTCCCCCTGAACCTGAACTCTGCAACAGTCGCGGACACGGCCGTGTATTACTGTGCCACAGGGAGAGGGCTGTCGCGCTTT  270
V  88.0% (220/250)  IGHV4-30-4*01  229  ..G......T..T.......G....G.....TG..T.C...A.........................G..--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD2-15*01    7    -----------------------------------------------------------------------------------------.  7

                                        --CDR3-IMGT--------------------------->                                 
                                         C  S  A  G  S  C  E  L  S  G  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_6501     271  TGTAGTGCTGGTTCCTGCGAACTCTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  342
D  92.3% (12/13)    IGHD2-15*01    8    .......G....------------------------------------------------------------  19
J  97.8% (45/46)    IGHJ6*02       17   --------------------------..................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_80086

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           307     1e-85
IGHD3-16*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	222	26	0	89.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_6502   4    CCCTGAGACTCTCCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  89.5% (222/248)  IGHV4-61*01  50   .....TCC...A..........C.................C....G.AG.T..........C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S  
                    Query_6502   94   TGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCCA  183
V  89.5% (222/248)  IGHV4-61*01  140  ...A.........GT............G......CAC..A.........................G.CA....A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y  
                    Query_6502   184  AAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTATC  273
V  89.5% (222/248)  IGHV4-61*01  230  .G................A.................................G...............----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-16*02  24   ------------------------------------------------------------------------------------......  29

                                      ---------------->                                  
                                      R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_6502   274  GTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  324
D  100.0% (7/7)     IGHD3-16*02  30   .--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    -.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_240563

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           439     2e-125
IGHD3-16*01                                                                                           12.2    35    
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTTGAGG	GATTAC	CAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTAC	ARSLRDYQPFYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	285	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_6503   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  98.6% (285/289)  IGHV5-51*03  6    .............................................................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_6503   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.6% (285/289)  IGHV5-51*03  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6503   181  GTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACTGC  270
V  98.6% (285/289)  IGHV5-51*03  186  ......................A................................................................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  S  L  R  D  Y  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_6503   271  CATGTATTACTGTGCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  359
V  98.6% (285/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  8    ----------------------------......-------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ------------------------------------------....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_240560

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           396     2e-112
IGHD1-26*01                                                                                           27.6    9e-04 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTC	ARHGDDSGSYLYYFYGMDV	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	100	14	0	87.7
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	295	274	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  T  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_6504   5    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGACAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCA  94
V  92.9% (274/295)  IGHV5-51*01  2    .................................A...................................G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  V  G  I  M  Y  P  G  D  S  D  T  R  Y  
                    Query_6504   95   ATTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGGTGGGGATCATGTATCCTGGTGACTCTGATACCAGATATA  184
V  92.9% (274/295)  IGHV5-51*01  92   GC..........G.....................................A..........C..........................C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  R  R  A  P  D  
                    Query_6504   185  GCCCGTCTTTCGAGGGCCACGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTATTTGCAGTGGGGGAGCCGGAGGGCCCCGGACA  274
V  92.9% (274/295)  IGHV5-51*01  182  .......C...C.A.....G......................................CC........A.C....T..A....T......  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  F  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  P  G  T  
                    Query_6504   275  CCGCCATATATTTCTGTGCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTCTGGGGCCCGGGGACCA  364
V  92.9% (274/295)  IGHV5-51*01  272  .......G....A............-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (14/14)   IGHD1-26*01  4    ---------------------------------..............-------------------------------------------  17
J  93.0% (53/57)    IGHJ6*02     6    --------------------------------------------------.......A......T................AA.......  45

                                                       
                                      T  V  T  V  S  S 
                    Query_6504   365  CGGTCACCGTCTCCTCA  381
J  93.0% (53/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_80085

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           343     2e-96
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCCAA	GTATAGAAGTGGC	ACCTACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCCAAGTATAGAAGTGGCACCTACTTTTGACTAT	AREPSIEVAPTFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  T  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  R  R 
                    Query_6505   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTACTGGTGGCTACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAGGAGA  90
V  93.6% (235/251)  IGHV4-61*08  49   .........................................C.G......T...........C.................A....A.G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  G  K  S 
                    Query_6505   91   CTGGAGTGGATTGGCTATATCTATTACACTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGGCAAGTCG  180
V  93.6% (235/251)  IGHV4-61*08  139  ..............G.............G......C............................................A.A..C...C  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  P  S  I  E  V  A 
                    Query_6505   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGAGCCAAGTATAGAAGTGGCA  270
V  93.6% (235/251)  IGHV4-61*08  229  ...................A.......................................C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD6-19*01  3    ----------------------------------------------------------------------------......C......-  15

                                      -------------->                                  
                                       P  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6505   271  CCTACTTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  97.7% (42/43)    IGHJ4*02     6    ------........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_187224

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           344     6e-97
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGACGTGCGCACTCAA	GGGGGA	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGACGTGCGCACTCAAGGGGGATTGACTAC	ARDLGRAHSRGIDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  N  N  H  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6506   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGCTTCAATAACCATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-33*01  47   ....................................C.....G..G.T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  S  R  R  Y  Y  S  D  S  V  R  G  Q  F  T  I  S  R  D  N  S  
                    Query_6506   91   AGTGGGTGGCAATTATTTGGTATGATGGAAGTCGTAGATACTATTCAGACTCCGTGAGGGGCCAATTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-33*01  137  ...........G....A...............AA..A.......G............A.....G..........................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  S  A  E  D  T  A  I  Y  Y  C  A  R  D  L  G  R  A  H  S  
                    Query_6506   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGCGCCGAGGACACGGCTATATATTACTGTGCGAGAGATCTTGGACGTGCGCACTCAA  270
V  94.0% (235/250)  IGHV3-33*01  227  ..................................A...............G.G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ------------->                                 
                                      R  G  I  D  Y  W  G  L  G  T  L  V  T  V  S  S 
                    Query_6506   271  GGGGGATTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCA  317
D  100.0% (6/6)     IGHD3-16*01  18   ......-----------------------------------------  23
J  97.6% (40/41)    IGHJ4*02     7    ------...............A.........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_26059

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           367     6e-104
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAC	TATTATTATGGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTATTATTATGGTTCGGGGAGTTATTTTGACTAC	ARGHYYYGSGSYFDY	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  F  S  S  G  G  Y  Y  W  N  W  I  R  Q  H  P  G  K  G  
                    Query_6507   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCTTCAGCAGTGGTGGTTACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  97.2% (242/249)  IGHV4-31*02  50   .....TCC...A.......................A........................G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_6507   94   TGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  97.2% (242/249)  IGHV4-31*02  140  ..............T...........................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  Y  Y  Y  G  S  
                    Query_6507   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTATTATTATGGTTCGG  273
V  97.2% (242/249)  IGHV4-31*02  230  .....................................................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  95.8% (23/24)    IGHD3-10*01  2    --------------------------------------------------------------------------.....C..........  17

                                      ---------------->                                  
                                      G  S  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6507   274  GGAGTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  95.8% (23/24)    IGHD3-10*01  18   ........-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    --------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_26058

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           367     6e-104
IGHD3-10*01                                                                                           14.1    9.6   
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGCC	ACTATGG	GGATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATC	ARSHYGDAYWYLDI	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	10	78	69	68	1	0	98.6
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	97	17	0	85.1
CDR3-IMGT (germline)	292	296	5	5	0	0	100
Total	N/A	N/A	287	261	26	0	90.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T  S  Y 
                    Query_6508   10   CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATCTTCACCAGTTAT  99
V  90.9% (261/287)  IGHV1-18*01  7    .................................................................T..........C...T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  F  E  W  M  G  W  I  S  P  Y  N  G  N  T  A  Y  A  E 
                    Query_6508   100  GGAATCACTTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAGCCTACGCAGAG  189
V  90.9% (261/287)  IGHV1-18*01  97   ..T....GC...........................C.......................G.................AA...T...C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  F  T  V  A  T  E  T  S  T  N  T  A  F  M  E  L  R  S  L  K  A  D  D  T  A 
                    Query_6508   190  AAGTTCCAGGGCAGATTCACCGTGGCCACAGAGACTTCCACGAACACAGCCTTCATGGAGCTGCGGAGTCTGAAAGCTGACGACACGGCC  279
V  90.9% (261/287)  IGHV1-18*01  187  ...C...........G.....A..A.......C..A.......G........A..........A....C....G.T..............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  S  H  Y  G  D  A  Y  W  Y  L  D  I  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6508   280  GTCTATTACTGTGCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  367
V  90.9% (261/287)  IGHV1-18*01  277  ..G..............-----------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                          
D  100.0% (7/7)     IGHD3-10*01  6    ----------------------.......-----------------------------------------------------------  12
J  96.2% (51/53)    IGHJ2*01     1    -----------------------------------..........T.....C....................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_59269

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_6509   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_6509   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_6509   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_6509   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_26055

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            377     9e-107
IGHD3-22*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTG	ATTACTATGATAGTAGTGGTTA	CCCA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTGATTACTATGATAGTAGTGGTTACCCAGACTAC	ASLDYYDSSGYPDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	113	1	0	99.1
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	243	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_6510   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  99.2% (243/245)  IGHV4-4*02   49   ..............................................G...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_6510   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  99.2% (243/245)  IGHV4-4*02   139  ..........................................................................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  H  C  A  S  L  D  Y  Y  D  S  S  G 
                    Query_6510   181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATCACTGTGCGAGCCTTGATTACTATGATAGTAGTGGT  270
V  99.2% (243/245)  IGHV4-4*02   229  ......................................................T..........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (22/22)   IGHD3-22*01  3    ----------------------------------------------------------------------....................  22

                                      ----------->                                  
                                       Y  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6510   271  TACCCAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (22/22)   IGHD3-22*01  23   ..--------------------------------------------  24
J  100.0% (40/40)   IGHJ4*02     9    ------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_232408

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD6-19*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGCCCCCCGTACCGCA	TATAGCAGTGCCTG	CCACG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGCCCCCCGTACCGCATATAGCAGTGCCTGCCACGGACTAC	ARWPPVPHIAVPATDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  R  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6511   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTAGGTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.9% (238/243)  IGHV4-59*01  49   ......................................C.....T.............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  M  N 
                    Query_6511   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCATGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  .....................................................................................A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  M  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  W  P  P  V  P  H  I  A  V 
                    Query_6511   181  CAGTTCTCCCTGAAGATGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGATGGCCCCCCGTACCGCATATAGCAGTG  270
V  97.9% (238/243)  IGHV4-59*01  229  ...............C.....................................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  4    --------------------------------------------------------------------------------..........  13

                                      -------------->                                  
                                       P  A  T  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_6511   271  CCTGCCACGGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  319
D  92.9% (13/14)    IGHD6-19*01  14   G...---------------------------------------------  17
J  97.5% (39/40)    IGHJ4*02     9    ---------............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_26057

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           336     2e-94
IGHD6-19*01                                                                                           21.8    0.046
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCGGGGCCAACGGGCGGTAAGGCATGC	CAGTGGCTGGT	TCGCGGTTGGTAATCCCAACGACGATTATTATC	ACGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGGGCCAACGGGCGGTAAGGCATGCCAGTGGCTGGTTCGCGGTTGGTAATCCCAACGACGATTATTATCACGGGATGGACGTC	ARGRGQRAVRHASGWFAVGNPNDDYYHGMDV	238	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	230	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  E  S  F  S  G  Y  F  W  T  W  I  R  Q  P  P  G  T  G  L  E 
                    Query_6512   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGAGTCCTTCAGTGGTTACTTCTGGACTTGGATCCGCCAGCCCCCAGGGACGGGGCTGGAG  90
V  93.9% (230/245)  IGHV4-34*01  49   ...............................G.................A.....GC......................A..........  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  T  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_6512   91   TGGATTGGGGAAATAAATCATAGTGGAAGCACCACCTACAGCCCGTCCCTCAAGAGTCGAGTCACCATCTCCGTAGACACGTCCAATAAC  180
V  93.9% (230/245)  IGHV4-34*01  139  ..............C...................A.....A...........................A..A..............G...  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  G  R  G  Q  R  A  V  R  H 
                    Query_6512   181  CAGTTCTCCCTGAATTTGAGCTCTGTGACCGCCGCGGACACGGCTCTGTATTATTGTGCGAGAGGCCGGGGCCAACGGGCGGTAAGGCAT  270
V  93.9% (230/245)  IGHV4-34*01  229  ..............GC.............................G.......C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      ---------CDR3-IMGT----------------------------------------->                              
                                       A  S  G  W  F  A  V  G  N  P  N  D  D  Y  Y  H  G  M  D  V  W  G  Q  G  T  T  V  R  V  S 
                    Query_6512   271  GCCAGTGGCTGGTTCGCGGTTGGTAATCCCAACGACGATTATTATCACGGGATGGACGTCTGGGGCCAAGGGACCACGGTCCGCGTCTCG  360
D  100.0% (11/11)   IGHD6-19*01  9    --...........-----------------------------------------------------------------------------  19
J  91.5% (43/47)    IGHJ6*02     16   ----------------------------------------------....T..............................AC......C  59

                                         
                                       S 
                    Query_6512   361  TCA  363
J  91.5% (43/47)    IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_26056

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*03                                                                                           282     3e-78
IGHD1-26*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGTTCCAGG	GTGGGAG	GTTCTCGGGGACTA	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGTTCCAGGGTGGGAGGTTCTCGGGGACTAGACTCC	AGSRVGGSRGLDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	210	30	0	87.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  T  D  F  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6513   1    ACCCTGTCCCTCACCTGCAGCGTGTCTGGAGGCTCCATCACTGACTTCTACTGGACCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAA  90
V  87.5% (210/240)  IGHV4-59*03  49   ...................CT..C.....T..........G.AGT.A........G..................A..............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       Y  I  G  Y  I  Y  Y  T  G  D  T  N  Y  N  P  S  L  R  G  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6513   91   TACATTGGCTATATCTATTACACTGGCGACACCAACTACAATCCCTCCCTCAGGGGTCGAGTCACCATATCCGTGGACACGTCGAAGAAC  180
V  87.5% (210/240)  IGHV4-59*03  139  .GG.....G.............G...GAG............C..........A.A................A..A........C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  A  Y  Y  C  A  G  S  R  V  G  G  S  R  G  L 
                    Query_6513   181  CAATTCTCCCTGAAACTTAACTCTGTGACCGCTGCGGACACGGCCGCTTATTACTGTGCGGGTTCCAGGGTGGGAGGTTCTCGGGGACTA  270
V  87.5% (210/240)  IGHV4-59*03  229  ..............G..G.G..........................TG............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD1-26*01  7    ---------------------------------------------------------------------.......--------------  13

                                      ----->                                  
                                       D  S  W  G  Q  G  I  L  V  T  I  S  S  
                    Query_6513   271  GACTCCTGGGGCCAGGGAATCCTGGTCACCATCTCCTCAG  310
J  92.5% (37/40)    IGHJ4*02     9    ....A..............C..........G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_26051

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           375     3e-106
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6514   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.0% (245/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  V  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_6514   91   CTGGAGTGGGTTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.0% (245/250)  IGHV4-31*03  139  .........A.....T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_6514   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.0% (245/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6514   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_26052

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAGGGAGT	AGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCC	ARAGSSGWLDS	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  D  Y  W  S  W  I  R  K  P  P  G  K  G  L  E 
                    Query_6515   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATAACTAGTGACTACTGGAGCTGGATCCGGAAGCCCCCTGGGAAGGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*01  49   .............................T........C.G....T....................C.......A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  D  Y  N  S  S  L  K  S  R  V  T  I  S  F  D  R  S  K  N 
                    Query_6515   91   TGGATTGGATATATCTATTACAGTGGGAGCACCGACTACAATTCCTCCCTCAAGAGTCGAGTCACCATATCATTTGACAGGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*01  139  ........G........................A.......CC.............................G.A....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  S  S  G  W  L  D  S 
                    Query_6515   181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCC  270
V  93.0% (227/244)  IGHV4-59*01  229  ...............C....C..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-19*01  10   ------------------------------------------------------------------------.........---------  18
J  97.5% (39/40)    IGHJ4*02     7    ----------------------------------------------------------------------------------......A.  14

                                                                      
                                       W  G  Q  G  T  L  V  T  V  S  S
                    Query_6515   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  302
J  97.5% (39/40)    IGHJ4*02     15   ................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_170915

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           327     9e-92
IGHD1-26*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	ACT	TAGGGGGAGC	CCAACAATGGGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACTTAGGGGGAGCCCAACAATGGGGGGACTACTTTGGCAAC	ANLGGAQQWGDYFGN	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	225	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  E  L  E 
                    Query_6516   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATAGTTACTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAAGAACTGGAG  90
V  93.4% (225/241)  IGHV4-59*08  49   ...............................G........G.........C.............................G.G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  G  R  V  T  M  S  I  D  T  S  K  S 
                    Query_6516   91   TGGATTGGCTATGTCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTTAAGGGTCGAGTCACCATGTCAATAGACACGTCCAAGAGC  180
V  93.4% (225/241)  IGHV4-59*08  139  ........G...A.....................................C...A.............A...G...............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  N  L  G  G  A  Q  Q  W  G  D 
                    Query_6516   181  CAGTTCTCACTGAGGCTGACCTCTGTGACCGCCGCAGACACGGCCGTATATTACTGTGCGAACTTAGGGGGAGCCCAACAATGGGGGGAC  270
V  93.4% (225/241)  IGHV4-59*08  229  ........C....A.....G...........................G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.0% (9/10)     IGHD1-26*01  5    ----------------------------------------------------------------...T......----------------  14
J  93.8% (45/48)    IGHJ4*02     1    ----------------------------------------------------------------------------------------..  2

                                      ----------->                                  
                                       Y  F  G  N  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_6516   271  TACTTTGGCAACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  316
J  93.8% (45/48)    IGHJ4*02     3    .......A.T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_170914

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            372     2e-105
IGHD1-26*01                                                                                           12.2    33    
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	GGGAGC	ATCGAAAT	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGAGGGAGCATCGAAATATTACAACTACTACTACAGTATGGACGTC	AKEGASKYYNYYYSMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  G  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6517   1    GGTCCCTGAGACTCTCCTGTGGAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  97.6% (244/250)  IGHV3-9*01   47   .....................C....................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  K  S  R  T  I  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6517   91   AGTGGGTCTCAGGTATTAGTTGGAAAAGTCGTACCATAGACTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (244/250)  IGHV3-9*01   137  .........................T...G...G.....G..................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  E  G  A  S  K  Y  Y  
                    Query_6517   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACAGCCTTGTATTACTGTGCAAAAGAGGGAGCATCGAAATATTACA  270
V  97.6% (244/250)  IGHV3-9*01   227  ..............................................G.......................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-26*01  9    ----------------------------------------------------------------------......--------------  14
J  95.2% (59/62)    IGHJ6*02     1    ------------------------------------------------------------------------------------.....T  6

                                      GT-------------------->                                 
                                      N  Y  Y  Y  S  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6517   271  ACTACTACTACAGTATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTCCTCA  326
J  95.2% (59/62)    IGHJ6*02     7    ...........G...................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_170917

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           322     2e-90
IGHD3-10*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGAGTAAATCC	ATGGTTCGGGGTGTTA	CCCCCGCGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGAGTAAATCCATGGTTCGGGGTGTTACCCCCGCGGGCTAC	AGSKSMVRGVTPAGY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	242	3	3	0	0	100
Total	N/A	N/A	242	224	18	0	92.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  S  V  T  S  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6518   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGGTTCAGCGTCACTAGCAACTACATGAATTGGGTCCGGCAGGCTCCAGGGAAGGGGCTGG  90
V  92.6% (224/242)  IGHV3-53*01  47   ....................G...............C.....G..............GC........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  H  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  S  I  F  R  D  S  T  K  
                    Query_6518   91   AGTGGGTCTCAGTTATTCATAGCGGGGGTACCACATACTACGCAGACTCCGTGAAGGGCCGATTCAGCATCTTTAGAGACAGTACTAAGA  180
V  92.6% (224/242)  IGHV3-53*01  137  .................T.......T....G...................................C.....CC.......A.T.C....  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------CDR3-IMGT----
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  G  S  K  S  M  V  R  G  V  
                    Query_6518   181  ACACCCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTACTACTGTGCGGGGAGTAAATCCATGGTTCGGGGTGTTA  270
V  92.6% (224/242)  IGHV3-53*01  227  ....G............................................G..T.........----------------------------  288
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  93.8% (15/16)    IGHD3-10*01  9    --------------------------------------------------------------------------...........A....  24

                                      ------------->                                  
                                      T  P  A  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6518   271  CCCCCGCGGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (38/38)   IGHJ4*02     11   ----------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_170916

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           352     3e-99
IGHD6-6*01                                                                                            25.7    0.003
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCACTGGCGC	ATAGCAGCTCGTC	GGGAGGGGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCACTGGCGCATAGCAGCTCGTCGGGAGGGGGGCTTGACCAC	ASLAHSSSSGGGLDH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	235	10	0	95.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6519   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.9% (235/245)  IGHV3-30*03  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  V  K  W  Y  A  D  S  L  K  G  R  I  T  I  S  R  D  N  S  
                    Query_6519   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTGTTAAATGGTATGCAGACTCCCTGAAGGGCCGAATCACCATCTCCAGAGACAATTCCA  180
V  95.9% (235/245)  IGHV3-30*03  137  ................................AA.....AC............G...........T........................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  E  M  N  S  Q  R  A  E  D  T  A  V  Y  Y  C  A  S  L  A  H  S  S  S  S  
                    Query_6519   181  AGAACACGCTGTATCTAGAAATGAACAGCCAGAGAGCTGAGGACACGGCTGTCTATTACTGTGCGTCACTGGCGCATAGCAGCTCGTCGG  270
V  95.9% (235/245)  IGHV3-30*03  227  ................GC............T.....................G............-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (13/13)   IGHD6-6*01   5    ---------------------------------------------------------------------------.............--  17

                                      ---------------->                                  
                                      G  G  G  L  D  H  W  G  Q  G  P  L  V  T  V  S  S  
                    Query_6519   271  GAGGGGGGCTTGACCACTGGGGCCAGGGACCCCTGGTCACCGTCTCCTCAG  321
J  95.2% (40/42)    IGHJ4*02     7    ---------.....T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_170911

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           297     7e-83
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GATAG	N/A	N/A	GTGCGGGATGGCAACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGATAGGTGCGGGATGGCAACCTGACTAC	VIGAGWQPDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	5	2	0	71.4
Total	N/A	N/A	244	217	27	0	88.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  S  G  Y  Y  L  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6520   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTGAGTGGTTATTATTTGAACTGGATCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  88.9% (217/244)  IGHV4-59*01  49   ....................................A.C...A....C..C.G..G.........G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  L  I  S  Y  T  G  S  T  N  Y  N  P  S  L  Q  S  R  V  I  I  S  V  D  T  S  K  N 
                    Query_6520   91   TGGCTTGGTTTAATCTCTTACACCGGGAGTACCAACTACAACCCCTCCCTCCAGAGTCGAGTCATCATATCGGTAGACACGTCCAAGAAC  180
V  88.9% (217/244)  IGHV4-59*01  139  ...A....G.AT....A.....GT.....C.....................A............C......A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  V  I  G  A  G  W  Q  P  D  Y  W 
                    Query_6520   181  CAGTTCTCCCTGAGGTTGAGCTCTGTGACCGCTGCGGACACGGCCCTATATTATTGTGTGATAGGTGCGGGATGGCAACCTGACTACTGG  270
V  88.9% (217/244)  IGHV4-59*01  229  .............A.C.............................G.G.....C....C..G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  95.1% (39/41)    IGHJ4*02     8    --------------------------------------------------------------------------------..........  17

                                                                     
                                       G  P  G  T  L  V  T  V  S  S  
                    Query_6520   271  GGCCCGGGAACGCTGGTCACCGTCTCCTCAG  301
J  95.1% (39/41)    IGHJ4*02     18   ....A......C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_170913

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     3e-93
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATGG	GGTTCGAGGA	CACTCGACCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTTCGAGGACACTCGACCGTTTTTGATATC	ARDGVRGHSTVFDI	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	227	15	0	93.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  S  N  S  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_6521   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAATAGTAACTCTTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.8% (227/242)  IGHV4-59*08  50   .....TCC...A...........................G....T...AC........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N  
                    Query_6521   94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTATAATCCCTCCCTTAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAACC  183
V  93.8% (227/242)  IGHV4-59*08  140  .....................................C..C........C.....................G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  V  R  G  H  S  T  V  
                    Query_6521   184  AGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGATGGGGTTCGAGGACACTCGACCGTTT  273
V  93.8% (227/242)  IGHV4-59*08  230  ...................C........C.......................C.........----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  90.0% (9/10)     IGHD3-10*01  11   -------------------------------------------------------------------......G...-------------  20
J  93.2% (41/44)    IGHJ3*02     7    ----------------------------------------------------------------------------------------..  8

                                      ------->                                  
                                      F  D  I  W  G  Q  G  T  T  I  I  V  S  S  
                    Query_6521   274  TTGATATCTGGGGCCAAGGGACAACGATCATCGTCTCTTCAG  315
J  93.2% (41/44)    IGHJ3*02     9    ........................T.G...C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_170919

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CATTTC	TATTACTATGATACTAGTGGTT	CTTCAGGTGGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATTTCTATTACTATGATACTAGTGGTTCTTCAGGTGGCGACTAC	AKHFYYYDTSGSSGGDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6522   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGGAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-23*01  47   ...........................................C..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  D  I  S  D  N  A  A  H  T  Y  Y  A  E  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_6522   91   AGTGGGTCTCAGATATTAGTGATAATGCTGCTCATACATACTACGCAGAGTCCGTGAGGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (236/248)  IGHV3-23*01  137  ............C........G..G..G..G.AGC..............C.......A................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  H  F  Y  Y  Y  D  T  
                    Query_6522   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAAACATTTCTATTACTATGATACTA  270
V  95.2% (236/248)  IGHV3-23*01  227  ........................................G...........................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.5% (21/22)    IGHD3-22*01  2    --------------------------------------------------------------------------.............G..  17

                                      GT-------------------->                                  
                                      S  G  S  S  G  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6522   271  GTGGTTCTTCAGGTGGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.5% (21/22)    IGHD3-22*01  18   ......---------------------------------------------------  23
J  100.0% (40/40)   IGHJ4*02     9    -----------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_170918

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           372     2e-105
IGHD3-10*01                                                                                           23.8    0.011 
IGHJ1*01                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TAACGGCG	GGTTCGGGGAGT	N/A	CTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAACGGCGGGTTCGGGGAGTCTGAATACTTCCAGCAC	ARHNGGFGESEYFQH	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	112	2	0	98.2
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_6523   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  97.6% (244/250)  IGHV4-39*01  50   .....TCC...A..............................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  C  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_6523   94   TGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACTGCCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCA  183
V  97.6% (244/250)  IGHV4-39*01  140  ............................................AA............................................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  N  G  G  F  G  E  
                    Query_6523   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATAACGGCGGGTTCGGGGAGT  273
V  97.6% (244/250)  IGHV4-39*01  230  ......................................................................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD3-10*01  11   ------------------------------------------------------------------------------............  22

                                      ---------------->                                  
                                      S  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6523   274  CTGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (51/51)   IGHJ1*01     2    ...................................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_283811

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           375     2e-106
IGHD4-17*01                                                                                           14.1    8.3   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGTATACCTGA	TGACTCCGTTGAC	AC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGTATACCTGATGACTCCGTTGACACCTTTGACCAG	AGIPDDSVDTFDQ	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	243	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6524   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (243/246)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_6524   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCGCCAACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (243/246)  IGHV4-31*03  139  ....................................A..T..................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  I  P  D  D  S  V  D 
                    Query_6524   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGGGTATACCTGATGACTCCGTTGAC  270
V  98.8% (243/246)  IGHV4-31*03  229  .....................................................G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  84.6% (11/13)    IGHD4-17*01  1    -----------------------------------------------------------------------------.....A..G....  13

                                      ----------->                                  
                                       T  F  D  Q  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6524   271  ACCTTTGACCAGTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  316
J  93.2% (41/44)    IGHJ4*02     5    --.......T.C.......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_281098

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           355     3e-100
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCACTGGCGC	ATAGCAGCTCGTC	GGGAGGGGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCACTGGCGCATAGCAGCTCGTCGGGAGGGGGGCTTGACCAC	ASLAHSSSSGGGLDH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6525   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.3% (236/245)  IGHV3-30*03  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  V  K  W  Y  A  D  S  L  K  G  R  I  T  I  S  R  D  N  S  
                    Query_6525   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTGTTAAATGGTATGCAGACTCCCTGAAGGGCCGAATCACCATCTCCAGAGACAATTCCA  180
V  96.3% (236/245)  IGHV3-30*03  137  ................................AA.....AC............G...........T........................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  L  A  H  S  S  S  S  
                    Query_6525   181  AGAACACGCTGTATCTAGAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTCTATTACTGTGCGTCACTGGCGCATAGCAGCTCGTCGG  270
V  96.3% (236/245)  IGHV3-30*03  227  ................GC..................................G............-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (13/13)   IGHD6-6*01   5    ---------------------------------------------------------------------------.............--  17

                                      ---------------->                                  
                                      G  G  G  L  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6525   271  GAGGGGGGCTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.6% (41/42)    IGHJ4*02     7    ---------.....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_153762

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           322     2e-90
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  G  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_6526   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTGGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGCAAGGGG  90
V  92.2% (225/244)  IGHV4-39*01  49   ...............................G.....T.....G.A...G.................................G......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  Y  S  R  I  T  Y  S  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_6526   91   CTGGAGTGGATTGGGACTATCTATTATAGTAGAATTACCTACTCTGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCC  180
V  92.2% (225/244)  IGHV4-39*01  139  ................G.............G.G.GC.......ACA..........C.................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_6526   181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  92.2% (225/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6526   271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_180764

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           372     2e-105
IGHD4-4*01                                                                                            19.9    0.17  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATCAGC	CAGTAACTAC	TCTCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCAGCCAGTAACTACTCTCGGCTAC	ARNQPVTTLGY	281	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	166	21	15	6	0	71.4
FR3-IMGT	167	280	114	104	10	0	91.2
CDR3-IMGT (germline)	281	286	6	6	0	0	100
Total	N/A	N/A	286	262	24	0	91.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  V  T  V  S  N  N
                    Query_6527   1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGGTCACCGTCAGTAACAA  90
V  91.6% (262/286)  IGHV3-53*01  6    ..........G..............................................................T............G...  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  L  S  V  M  Y  S  R  G  A  T  R  Y  A  D  S
                    Query_6527   91   CTATATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGCTCTCAGTCATGTATAGTCGTGGAGCCACAAGGTACGCAGACTC  180
V  91.6% (262/286)  IGHV3-53*01  96   ...C....GC....................................G.......T..T.....CG....TAG....TAC...........  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  R  G  R  F  T  I  S  R  D  S  S  K  N  T  V  Y  L  Q  M  K  N  L  R  V  E  D  T  A  V
                    Query_6527   181  CGTGAGGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGAACACGGTGTATCTTCAAATGAAAAACCTGAGAGTCGAGGACACGGCCGT  270
V  91.6% (262/286)  IGHV3-53*01  186  .....A..........................A.............C................C.G........C...............  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><-----------CDR3-IMGT----------->                                  
                                        Y  Y  C  A  R  N  Q  P  V  T  T  L  G  Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_6527   271  CTATTACTGTGCGAGAAATCAGCCAGTAACTACTCTCGGCTACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  347
V  91.6% (262/286)  IGHV3-53*01  276  G...............-------------------------------------------------------------  291
                                        Y  Y  C  A  R                                                              
D  100.0% (10/10)   IGHD4-4*01   7    -----------------------..........--------------------------------------------  16
J  97.4% (37/38)    IGHJ4*02     11   ---------------------------------------...........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_86989

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           364     5e-103
IGHD3-22*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCAGGG	TTACTATGATAATAGTG	CGTACGGTTG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCAGGGTTACTATGATAATAGTGCGTACGGTTGC	ARAQGYYDNSAYGC	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6528   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGGAATCAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-48*03  47   ...................................................A...G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  V  S  Y  I  S  S  S  G  N  S  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6528   91   AGTGCGTTTCATACATTAGTAGTAGTGGTAATAGCATTTACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (241/249)  IGHV3-48*03  137  ....G.........................G..C...A..............T.....................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  Q  G  Y  Y  D  N  
                    Query_6528   181  AGAACTCACTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGCGCAGGGTTACTATGATAATA  270
V  96.8% (241/249)  IGHV3-48*03  227  ................G....................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  94.1% (16/17)    IGHD3-22*01  4    ----------------------------------------------------------------------------...........G..  17

                                      ------------->                                  
                                      S  A  Y  G  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6528   271  GTGCGTACGGTTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  94.1% (16/17)    IGHD3-22*01  18   ...---------------------------------------------  20
J  100.0% (35/35)   IGHJ4*02     14   -------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_86988

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           352     3e-99
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCATAGGGGTG	ATTACGATTTTTGGAGGGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCATAGGGGTGATTACGATTTTTGGAGGGGTTATTGACTACTTCGACTAC	ARSIGVITIFGGVIDYFDY	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	234	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6529   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (234/243)  IGHV4-59*08  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  S  T  K  Y  N  P  S  L  Q  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_6529   91   TGGATTGGTTATGTGTATTACAGTGGGAGCACCAAGTATAACCCCTCGCTCCAGAGTCGAGTCACCATATCACTAGACACCTCCAAGAAC  180
V  96.3% (234/243)  IGHV4-59*08  139  ........G...A.C....................C..C........C...A....................G.......G.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  I  G  V  I  T  I  F  G 
                    Query_6529   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGATCCATAGGGGTGATTACGATTTTTGGA  270
V  96.3% (234/243)  IGHV4-59*08  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.8% (23/24)    IGHD3-3*01   3    ---------------------------------------------------------------------------...............  17

                                      ----------------------->                                  
                                       G  V  I  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6529   271  GGGGTTATTGACTACTTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.8% (23/24)    IGHD3-3*01   18   .T.......-------------------------------------------------  26
J  97.9% (47/48)    IGHJ4*02     1    ----------.......T........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_286550

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD1-26*01                                                                                           12.2    31   
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARAKGIAVIVDAFDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_6530   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ..................A.....................G............................C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  V  S  V  D  M  S  N  N 
                    Query_6530   91   TGGATTGGATATATCTATTACAGAGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAGACATGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G..............T....G.....A......C.....CC................CA.A..........C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  K  G  I  A  V  I  V  D 
                    Query_6530   181  CGGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGTGCGAGAGCTAAGGGTATCGCTGTTATAGTAGAT  270
V  90.6% (221/244)  IGHV4-59*01  229  .A...........AG.................T.......CG.....G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------------......----  8
J  91.8% (45/49)    IGHJ3*01     2    ---------------------------------------------------------------------------------------...  4

                                      ----------->                                  
                                       A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_6530   271  GCTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  316
J  91.8% (45/49)    IGHJ3*01     5    .........G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_4949

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGGACAC	TGTAGTAGTGCCATCTGCGATG	GACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTAC	ARHMGHCSSAICDGPDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  Q  K  P  G  E  A  L  K  I  S  C  K  G  S  G  Y  S  F  G  S  Y
                    Query_6531   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGCAAAAGCCGGGGGAGGCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCAGTTA  90
V  96.2% (280/291)  IGHV5-51*01  6    ............................A.......C......T......................................AC...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_6531   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.2% (280/291)  IGHV5-51*01  96   ........G.................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  P  A
                    Query_6531   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACCCCGC  270
V  96.2% (280/291)  IGHV5-51*01  186  .............................C.........C.................................A...........A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  M  G  H  C  S  S  A  I  C  D  G  P  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_6531   271  CATGTATTACTGTGCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  96.2% (280/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  86.4% (19/22)    IGHD2-2*01   8    -------------------------------.........A...G....T...-------------------------------------  29
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_6531   361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_104244

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           329     3e-92
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TGGGCTTCAGTC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGCTTCAGTCCTTTGCCTAC	ARDGLQSFAY	246	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  A  S  G  G  S  I  S  S  G  G  Y  L  W  S  W  I  R  Q  D  P  G  K  G  
                    Query_6532   4    CCCTGAGACTCTCCTGCTCTGCCTCTGGAGGCTCCATCAGTAGTGGTGGCTATCTCTGGAGCTGGATCCGCCAGGACCCAGGGAAGGGCC  93
V  92.0% (230/250)  IGHV4-31*03  50   .....TCC...A.....A...T......T...........C........T..CTA...................C...............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  F  T  I  S  L  E  T  S  
                    Query_6532   94   TGGAGTGGATTGGTTACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGATTTACCATATCACTAGAGACGTCTA  183
V  92.0% (230/250)  IGHV4-31*03  140  .............G.......A...................................A.......G...........G....C.......  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  L  Q  S  F  A  
                    Query_6532   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCGGCGGACACGGCCGTGTATTACTGTGCGAGAGATGGGCTTCAGTCCTTTGCCT  273
V  92.0% (230/250)  IGHV4-31*03  230  .....................................C................................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------.....A..  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6532   274  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.7% (43/44)    IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_104245

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           297     7e-83
IGHD1-26*01                                                                                           12.2    32   
IGHJ6*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGCTCCCGGAGACCA	GTATAATGG	C	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAGGCTCCCGGAGACCAGTATAATGGCATGGACGTC	VREAPGDQYNGMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  R  F  R  S  Y  G  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_6533   1    GGTCCCTGAGACTCTCCTGTGTAGGTTCTGGATTCAGGTTCAGAAGTTATGGCATGTACTGGGTCCGTCAGGCTCCAGGCAAGGGGCTGG  90
V  88.0% (220/250)  IGHV3-30*03  47   .....................C..CC..........CC.....T..C.........C..........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  L  Y  D  G  S  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6533   91   AGTGGGTGTCAGTCATATTATATGATGGAAGTAAAAAATATTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  88.0% (220/250)  IGHV3-30*03  137  ........G....T....C...............T.....C...........C................................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  D  M  N  T  L  G  P  E  D  T  A  T  Y  Y  C  V  R  E  A  P  G  D  Q  Y  
                    Query_6533   181  AGAATACACTATATCTAGACATGAACACCCTAGGACCTGAGGACACGGCTACATATTACTGTGTGAGAGAGGCTCCCGGAGACCAGTATA  270
V  88.0% (220/250)  IGHV3-30*03  227  ....C..G..G.....GC.A.......G...GA..G..............GTG..........C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD1-26*01  2    -------------------------------------------------------------------------------------.....  6

                                      ------------->                                 
                                      N  G  M  D  V  W  G  Q  G  T  A  V  I  V  S  S 
                    Query_6533   271  ATGGCATGGACGTCTGGGGCCAGGGGACCGCGGTCATCGTCTCGTCA  317
D  88.9% (8/9)      IGHD1-26*01  7    G...-------------------------------------------  10
J  90.5% (38/42)    IGHJ6*02     21   -----.................A......A......C......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_104242

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           335     4e-94
IGHD3-10*01                                                                                           21.8    0.041
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGGTTCGAGCAGTTATT	CCTTCGCGCG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTTCGAGCAGTTATTCCTTCGCGCGCTACGGTATGGACGTC	ARDGSSSYSFARYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  S  F  S  T  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6534   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCTCTTTCAGTACTTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-48*03  47   ....................G..............A.C.......G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  G  G  G  R  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6534   91   AGTGGGTTTCATACATTAGTGGCGGTGGACGTACCATTTACTACGCAGACTCTGTGAAGGGCCGATTCACCATATCCAGAGACAACGCCA  180
V  92.8% (232/250)  IGHV3-48*03  137  ....................A.TA....TA.......A...................................C................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  T  A  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  S  S  Y  S  
                    Query_6534   181  AGACCGCTCTGCATCTACAAATGAACAGCCTGAGAGCCGAAGACACGGCTGTTTATTACTGTGCGAGAGATGGTTCGAGCAGTTATTCCT  270
V  92.8% (232/250)  IGHV3-48*03  227  ...A.T.A...T....G.......................G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.2% (15/17)    IGHD3-10*01  10   ----------------------------------------------------------------------.......G.G.......---  26

                                      GT-------------------->                                 
                                      F  A  R  Y  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_6534   271  TCGCGCGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  326
J  98.0% (48/49)    IGHJ6*02     14   -------......................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_104243

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  H
                    Query_6535   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATCA  90
V  92.4% (268/290)  IGHV5-51*01  6    ....................C........A.....................G.........A......C.........C.......GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  P
                    Query_6535   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCCC  180
V  92.4% (268/290)  IGHV5-51*01  96   ...................................................G.......A.....G.......G....C.....C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  A
                    Query_6535   181  GTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCGC  270
V  92.4% (268/290)  IGHV5-51*01  186  ...............G........C...................................G.......G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_6535   271  CTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  350
V  92.4% (268/290)  IGHV5-51*01  276  .A.......C.....G....------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    -----------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_67575

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           357     1e-100
IGHD2-2*01                                                                                            16.1    2.3   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCCAGCACGTTATTTATGTGGTTCCC	GCTGCTAT	TTAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCCCAGCACGTTATTTATGTGGTTCCCGCTGCTATTTATTTTGACTAC	ARAQHVIYVVPAAIYFDY	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_6536   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.6% (239/250)  IGHV4-31*01  49   .............................................................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  D  I  Y  N  S  G  T  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  L  D  A  S 
                    Query_6536   91   CTGGAGTGGATTGGGGACATCTATAACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCTAGTCACCATATCACTAGACGCGTCT  180
V  95.6% (239/250)  IGHV4-31*01  139  ...............T........T.........G.................................T.........G.....A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  N  Q  F  S  L  Q  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  Q  H  V  I  Y  V 
                    Query_6536   181  AAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGCGAGCCCAGCACGTTATTTATGTG  270
V  95.6% (239/250)  IGHV4-31*01  229  ..................A......G..............................T.........A...--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      -IMGT--------------------->                                 
                                       V  P  A  A  I  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_6536   271  GTTCCCGCTGCTATTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  330
D  100.0% (8/8)     IGHD2-2*01   21   ------........----------------------------------------------  28
J  100.0% (42/42)   IGHJ4*02     6    ------------------..........................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_4940

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           329     3e-92
IGHD2-15*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGAGTTC	TTGTATTGGTGGT	TCTTGCTACCTGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGAGTTCTTGTATTGGTGGTTCTTGCTACCTGTTCTACTACTACGCTGTGGACGTC	AGSSCIGGSCYLFYYYAVDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	228	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  S  A  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_6537   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATCAGTGCTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  92.7% (228/246)  IGHV4-39*01  49   ..................A............G.........CAG..G..........................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  V  G  I  I  Y  H  S  G  S  A  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_6537   91   CTGGAGTGGGTGGGGATTATCTATCATAGTGGGAGCGCCTTCTACAACCCGTCCCTCAAGAGCCGAGTCACCATGTCCGTAGACACGTCC  180
V  92.7% (228/246)  IGHV4-39*01  139  .........A.T....G.......T...........A...A.....................T...........A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  C  I  G  G  S 
                    Query_6537   181  AAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACGGCCGCAGACACGGCTGTTTATTACTGTGCGGGGAGTTCTTGTATTGGTGGTTCT  270
V  92.7% (228/246)  IGHV4-39*01  229  .....................C.............C.................G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  92.3% (12/13)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G.......---  19

                                      DR3-IMGT------------------------>                                 
                                       C  Y  L  F  Y  Y  Y  A  V  D  V  W  G  Q  G  T  T  I  T  V  S  S 
                    Query_6537   271  TGCTACCTGTTCTACTACTACGCTGTGGACGTCTGGGGCCAAGGGACCACGATCACCGTCTCCTCA  336
J  94.5% (52/55)    IGHJ6*02     8    -----------...........G.A..........................G..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_4941

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            302     3e-84
IGHD2-15*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCATTGTGGA	AGTGGTGG	CTGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCATTGTGGAAGTGGTGGCTGTTTCTACTTTGACATC	ARVHCGSGGCFYFDI	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	46	5	0	90.2
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	104	10	0	91.2
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	220	27	0	89.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  A  S  S  D  S  I  S  G  S  D  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_6538   1    ACCCTGTCCCTCACCTGCGCTGCCTCTAGTGACTCCATCAGCGGTTCTGACTGGTGGACTTGGATCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  89.1% (220/247)  IGHV4-4*02   49   ......................T....G...G..........A..AG.A.........G....G..........................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  S  A  D  A  H  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  N  S  K 
                    Query_6538   91   GAGTGGATCGGAGAGATCCATCATAGTGCGGACGCCCACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCGGTAGACAACTCTAAG  180
V  89.1% (220/247)  IGHV4-4*02   139  ........T..G..A...T.........G.AG.A..A.....................................A........G..C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  E  L  R  S  V  T  A  A  D  A  A  L  Y  Y  R  A  R  V  H  C  G  S  G  G  C 
                    Query_6538   181  AACCAATTCTCCCTGGAGCTGAGGTCTGTGACCGCCGCGGACGCGGCCCTGTATTACCGTGCGAGAGTTCATTGTGGAAGTGGTGGCTGT  270
V  89.1% (220/247)  IGHV4-4*02   229  .....G.........A.......C..................A.....G........T.........-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD2-15*01  11   ------------------------------------------------------------------------------........----  18

                                      -------------->                                  
                                       F  Y  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6538   271  TTCTACTTTGACATCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  95.7% (45/47)    IGHJ4*02     2    --..........TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_4942

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*03                                                                                           324     8e-91
IGHD3-3*01                                                                                            19.9    0.16 
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TGTCGAGCGAGC	ATTTCGATATTTGGAG	CGGCCAACCCGACC	ACGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTGTCGAGCGAGCATTTCGATATTTGGAGCGGCCAACCCGACCACGGCATGGACCTC	ARVSSEHFDIWSGQPDHGMDL	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  I  F  R  N  Y  W  M  H  W  V  R  Q  S  P  G  K  G  L  
                    Query_6539   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCATCTTCAGAAATTACTGGATGCACTGGGTCCGCCAATCTCCAGGGAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-74*03  47   ........................C...........C......T.GC........................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  D  S  E  G  R  T  T  K  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  T  
                    Query_6539   91   TGTGGGTCTCACGTATTGATAGTGAGGGGAGAACCACAAAGTATGCGGACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  91.6% (228/249)  IGHV3-74*03  137  .................A.......T.....T.G.....C...C............A.............................G...  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      R  K  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  G  V  Y  H  C  A  R  V  S  S  E  H  F  D  
                    Query_6539   181  GAAAAACCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGGTGTCTATCACTGTGCAAGAGTGTCGAGCGAGCATTTCGATA  270
V  91.6% (228/249)  IGHV3-74*03  227  AG..C..G........................................C...G...T............---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD3-3*01   3    ---------------------------------------------------------------------------------...A....T  11

                                      DR3-IMGT-------------------------->                                 
                                      I  W  S  G  Q  P  D  H  G  M  D  L  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6539   271  TTTGGAGCGGCCAACCCGACCACGGCATGGACCTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  338
D  87.5% (14/16)    IGHD3-3*01   12   .......-------------------------------------------------------------  18
J  95.7% (45/47)    IGHJ6*02     16   ---------------------....T......G...................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_4943

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            363     2e-102
IGHD3-3*02                                                                                            12.2    33    
IGHJ6*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTT	GCATTT	CGATCTCCCACGAGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGCATTTCGATCTCCCACGAGGCATGGACGTC	ARLHFDLPRGMDV	264	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	77	27	23	4	0	85.2
FR2-IMGT	78	128	51	49	2	0	96.1
CDR2-IMGT	129	149	21	20	1	0	95.2
FR3-IMGT	150	263	114	107	7	0	93.9
CDR3-IMGT (germline)	264	268	5	5	0	0	100
Total	N/A	N/A	268	250	18	0	93.3


Alignments

                                     <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                        G  L  V  K  P  S  G  T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  T  Y  W  W  N  W  V  
                    Query_6540  1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCACCTGCACTGTGTCTGGGGGCTCCATCACCAGTACTTACTGGTGGAATTGGGTCC  90
V  93.3% (250/268)  IGHV4-4*01  26   ................TC.......................G....C.....T..........G.....G.A.........G........  115
                                        G  L  V  K  P  P  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                     --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                     R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  P  H  Y  S  P  S  L  K  S  R  V  
                    Query_6540  91   GCCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCCCCCACTACAGTCCGTCCCTCAAGAGTCGAGTCA  180
V  93.3% (250/268)  IGHV4-4*01  116  ...................G....................................A..A......AC......................  205
                                     R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                     ----------------------FR3-IMGT----------------------------------------------------><------
                                     T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  W  C  A  R  
                    Query_6540  181  CCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTGAAGTTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTGGTGTGCGAGGT  270
V  93.3% (250/268)  IGHV4-4*01  206  .........................................C....C.............................T..C........--  293
                                     T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A     

                                     --------CDR3-IMGT-------------->                                 
                                     L  H  F  D  L  P  R  G  M  D  V  W  G  Q  G  T  T  A  I  V  S  S 
                    Query_6540  271  TGCATTTCGATCTCCCACGAGGCATGGACGTCTGGGGCCAAGGGACCACGGCCATCGTCTCCTCA  335
D  100.0% (6/6)     IGHD3-3*02  7    -......----------------------------------------------------------  12
J  95.2% (40/42)    IGHJ6*02    21   -----------------------............................T..C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_4944

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           391     6e-111
IGHD4-17*01                                                                                           18.0    0.68  
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGG	CTACGGTGA	GTCCGAGTAGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTCTGGACGTC	ARDLATVSPSSFYYGLDV	291	344	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	45	6	0	88.2
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	103	11	0	90.4
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	273	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_6541   3    CAGATGCAGCTGGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  92
V  92.2% (273/296)  IGHV1-18*01  1    ...G.T.......................G............................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  K  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y 
                    Query_6541   93   AACTATGGTATTACCTGGGTGCGGCAGGCCCCTGGACAGGGACTTAAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTAT  182
V  92.2% (273/296)  IGHV1-18*01  91   .G.........C.G.........A..............A..G...G.........................C......A...........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  M  V  R  D  R  V  T  L  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  V  D  D 
                    Query_6541   183  GCGCAGATGGTCCGGGACAGAGTCACCTTGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGAGTTGACGAC  272
V  92.2% (273/296)  IGHV1-18*01  181  ..A....A.C...A..G..........A......C....................C..........C..............TC.......  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  S  F  Y  Y  G  L  D  V  W  G  Q  G  T  T 
                    Query_6541   273  ACGGCCGTGTATTACTGTGCGAGAGATCTGGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTCTGGACGTCTGGGGCCAAGGGACCACG  362
V  92.2% (273/296)  IGHV1-18*01  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------------.........--------------------------------------------------  12
J  98.1% (51/52)    IGHJ6*02     11   -----------------------------------------------------..........A..........................  47

                                                     
                                       V  T  V  S  S 
                    Query_6541   363  GTCACCGTCTCCTCA  377
J  98.1% (51/52)    IGHJ6*02     48   ...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_276517

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           371     7e-105
IGHD3-10*01                                                                                           14.1    9.4   
IGHJ4*01                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CCCAA	ATTACTTGGGTTC	CCAGCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACACCCAAATTACTTGGGTTCCCAGCCATTTGACTCC	ARHPNYLGSQPFDS	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	264	27	0	90.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  H  S  F  I  G  H
                    Query_6542   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCCGGACACAGTTTTATCGGCCA  90
V  90.7% (264/291)  IGHV5-51*01  6    ....................................C................................T...T....C....C.A..T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  M  I  Y  F  D  D  S  D  T  R  Y  S  P
                    Query_6542   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGAAAAGGCCTGGAGTGGATGGGGATGATATATTTTGACGACTCTGATACAAGATACAGTCC  180
V  90.7% (264/291)  IGHV5-51*01  96   ..............................G.......................C..C...CC..GT...........C........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  V  Y  L  Q  W  S  S  L  R  A  S  D  P  A
                    Query_6542   181  GTCCTTCGAGGGCCAGGTCACTATCTCCGCCGACAAGTCCATCAGTACCGTCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACCCTGC  270
V  90.7% (264/291)  IGHV5-51*01  186  .......C.A...........C.....A.................C....C.......................A..........A.C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  F  C  A  R  H  P  N  Y  L  G  S  Q  P  F  D  S  W  G  H  G  T  L  V  T  V  S  S  
                    Query_6542   271  CATGTATTTCTGTGCCAGACACCCAAATTACTTGGGTTCCCAGCCATTTGACTCCTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  359
V  90.7% (264/291)  IGHV5-51*01  276  ........A......G.....--------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                       
D  84.6% (11/13)    IGHD3-10*01  3    --------------------------......AT.....--------------------------------------------------  15
J  95.3% (41/43)    IGHJ4*01     6    ----------------------------------------------.......A.........A.........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_4946

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           343     2e-96
IGHD5-18*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD5-18*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGGCCTTCCCG	GGATACAGCTCTGGT	CTAGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGGCCTTCCCGGGATACAGCTCTGGTCTAGGTGCTTTTGATATC	AKGAFPGYSSGLGAFDI	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6543   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCAACTATGCCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-30*18  47   ...........................................T.G.....G...G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  S  F  D  G  S  D  K  Y  F  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_6543   91   AGTGGGTGGCATTTATATCATTTGATGGAAGTGATAAATACTTTGCGGACTCCGTGAAGGGCAGATTCAGCATCTCCAGAGACAATTCCA  180
V  94.0% (234/249)  IGHV3-30*18  137  ...........G.........A..........A.........A...A...............C......C....................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  V  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  A  F  P  G  Y  S  
                    Query_6543   181  AGAATACGGTGTTTCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTTTATTACTGTGCGAAAGGGGCCTTCCCGGGATACAGCT  270
V  94.0% (234/249)  IGHV3-30*18  227  ....C...C...A.......................................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (14/15)    IGHD5-18*01  3    --------------------------------------------------------------------------------..........  12

                                      GT-------------------->                                  
                                      S  G  L  G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6543   271  CTGGTCTAGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  327
D  93.3% (14/15)    IGHD5-18*01  13   A....----------------------------------------------------  17
J  100.0% (47/47)   IGHJ3*02     4    ----------...............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_4947

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD6-19*01                                                                                           12.2    30   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTGGC	GGCTGG	CTTAC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTGGCGGCTGGCTTACGGACGTC	TRGGGWLTDV	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6544   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTGGTTTCTACTGGAGCTGGATTCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   .............................T............A...A...............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  H  Y  S  G  H  T  N  Y  N  P  S  L  R  S  R  V  I  I  S  L  D  T  S  N  N 
                    Query_6544   91   TGGATTGGGAATATCCACTACAGTGGGCACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCATCATATCGCTGGACACGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  .........T.....T.T.........AG.......................A...........C......AG.A...........G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  I  S  L  K  V  N  S  G  T  A  A  D  T  A  L  Y  Y  C  T  R  G  G  G  W  L  T  D  V  W 
                    Query_6544   181  CAGATCTCCCTGAAGGTGAACTCTGGGACCGCTGCGGACACGGCCCTCTATTATTGTACGAGAGGTGGCGGCTGGCTTACGGACGTCTGG  270
V  90.6% (221/244)  IGHV4-59*01  229  ...T...........C...G.....T...................G.G.....C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  13   ---------------------------------------------------------------------......---------------  18
J  100.0% (40/40)   IGHJ6*02     23   --------------------------------------------------------------------------------..........  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_6544   271  GGCCAAGGGACCACGGTCACCGTCTCCTCA  300
J  100.0% (40/40)   IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_287786

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           349     2e-98
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TGGAGACC	TTCGGGGAGTTATTAT	TTG	GGGGC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  M  H  W  V  H  Q  A  P  G  K  G  L  
                    Query_6545   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTTAGTAGATATTGGATGCACTGGGTCCACCAAGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-74*01  47   .....................................C..C.....C..C................G.......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  G  D  G  S  G  T  S  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6545   91   TGTGGGTCTCCCGTATTAACGGTGATGGGAGTGGCACAAGCTCCGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (236/249)  IGHV3-74*01  137  ..........A........TA...........A.........A...............................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT---------------------------------------------------->                            
                                      K  K  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  V  E  T  F  G  E  L  
                    Query_6545   181  AGAAAACACTGTATCTGCAAATGAACAGTCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCAAGAGTGGAGACCTTCGGGGAGTTAT  270
V  94.8% (236/249)  IGHV3-74*01  227  ....C..G............................C................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (16/16)   IGHD3-10*01  13   -----------------------------------------------------------------------------.............  25

                                                                             
                                      L  F  G  G  Q  G  T  L  V  T  V  S  S  
                    Query_6545   271  TATTTGGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
D  100.0% (16/16)   IGHD3-10*01  26   ...------------------------------------  28
J  100.0% (33/33)   IGHJ4*02     16   ------.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_287783

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_6546   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.9% (229/244)  IGHV4-59*01  49   .......................................AG....T..............A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6546   91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.9% (229/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_6546   181  CAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.9% (229/244)  IGHV4-59*01  229  ...................G...........................G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_6546   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_287782

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD3-16*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	TGGGGGA	TGGCGACAATTCTGACATTTCG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTC	TRVGDGDNSDISYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  I  F
                    Query_6547   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTTAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTAGCATCTT  90
V  95.2% (275/289)  IGHV5-51*01  6    ...........................G.................................................G.....C..G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  I  K  Y  S  P
                    Query_6547   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATATCAAATACAGTCC  180
V  95.2% (275/289)  IGHV5-51*01  96   ....................................................A........................C..G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6547   181  GTCCTTCCAAGGCCAGGTCTCCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTTTGAAGGCCTCGGACACCGC  270
V  95.2% (275/289)  IGHV5-51*01  186  ...................A.................................................CC...................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  T  R  V  G  D  G  D  N  S  D  I  S  Y  G  M  D  V  W  G  Q  G  T  K  V  T  V
                    Query_6547   271  CATCTATTACTGTACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTCTGGGGCCAAGGGACCAAGGTCACCGT  360
V  95.2% (275/289)  IGHV5-51*01  276  ...G.........G.....-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-16*01  17   --------------------.......---------------------------------------------------------------  23
J  95.8% (46/48)    IGHJ6*02     15   -------------------------------------------------.....T.........................C.........  55

                                             
                                        S  S 
                    Query_6547   361  CTCCTCA  367
J  95.8% (46/48)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_287781

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           422     2e-120
IGHD5-12*01                                                                                           16.1    2.5   
IGHJ2*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAC	GGATGAGAGA	TGGCTACAATT	TTGTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACGGATGAGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTC	ATRMRDGYNFVDWYFDL	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  N  F  A  N  Y
                    Query_6548   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAACTTTGCCAACTA  90
V  96.6% (280/290)  IGHV5-51*01  6    .................................................................G...........G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_6548   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  96.6% (280/290)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  H  W  S  S  L  Q  A  S  D  T  A
                    Query_6548   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCACTGGAGTAGCCTCCAGGCCTCGGACACCGC  270
V  96.6% (280/290)  IGHV5-51*01  186  ............................................................G.....C.....GA................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  T  R  M  R  D  G  Y  N  F  V  D  W  Y  F  D  L  *  G  R  G  T  L  V  T  V
                    Query_6548   271  CATGTATTACTGTGCGACACGGATGAGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTCTGAGGCCGTGGCACCCTGGTCACTGT  360
V  96.6% (280/290)  IGHV5-51*01  276  .................G..----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  90.9% (10/11)    IGHD5-12*01  11   ------------------------------.......G...-------------------------------------------------  21
J  98.0% (50/51)    IGHJ2*01     3    -----------------------------------------------...................G.......................  45

                                              
                                        S  S  
                    Query_6548   361  CTCCTCAG  368
J  98.0% (50/51)    IGHJ2*01     46   ........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_287780

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTTCTACTTCTACGGTATGGACGTC	ARHGDDSGSYLFYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  L  T  N  Y
                    Query_6549   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCCTTACCAACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    .............................A...................................G.............T......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  H  S  P
                    Query_6549   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGACACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G...........................C....................C...................C....T.......  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_6549   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .......C.....................................C...........G......A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  F  Y  F  Y  G  M  D  V  W  G  Q  G  A  T  V
                    Query_6549   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTTCTACTTCTACGGTATGGACGTCTGGGGCCAAGGGGCCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  96.4% (53/55)    IGHJ6*02     8    ------------------------------------------------.....A............................A.......  49

                                                   
                                        T  V  S  S 
                    Query_6549   361  CACCGTCTCCTCA  373
J  96.4% (53/55)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_111299

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           313     1e-87
IGHD1-26*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCCA	AAACCAGAAGG	GGGAGCT	TCGAG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAACCAGAAGGGGGAGCTTCGAGATGGACGTC	AKTRRGSFEMDV	249	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	102	12	0	89.5
CDR3-IMGT (germline)	249	252	4	3	1	0	75
Total	N/A	N/A	252	226	26	0	89.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  S  F  T  F  S  D  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6550   1    GGTCCCTGAGACTCTCCTGTACAGCCTCCTCGTTCACTTTCAGTGACGCCTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.7% (226/252)  IGHV3-15*01  47   .......T............G.......TGGA............A.............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  V  D  G  G  T  T  D  Y  A  A  P  V  E  G  R  L  T  I  S  R  D  
                    Query_6550   91   AATGGGTGGGCCGTATTAAAAGTAAAGTTGATGGTGGGACAACAGACTATGCTGCACCCGTGGAAGGCAGATTAACCATCTCAAGAGATG  180
V  89.7% (226/252)  IGHV3-15*01  137  .G.....T..............C...AC.....................C............A..........C................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------CDR3-IMG
                                      D  S  K  N  T  V  Y  L  Q  V  R  N  L  K  T  E  D  T  A  V  Y  Y  C  A  K  T  R  R  G  S  
                    Query_6550   181  ATTCGAAAAACACGGTGTATCTACAAGTGAGAAACCTGAAGACCGAGGACACAGCCGTCTATTACTGTGCCAAAACCAGAAGGGGGAGCT  270
V  89.7% (226/252)  IGHV3-15*01  227  ....A.........C.......G...A...AC.G......A.................G.........A...------------------  298
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (7/7)     IGHD1-26*01  9    -----------------------------------------------------------------------------------.......  15

                                      T------------>                                 
                                      F  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6550   271  TCGAGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  100.0% (42/42)   IGHJ6*02     21   -----..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_287789

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           419     2e-119
IGHD7-27*01                                                                                           14.1    9.9   
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTCTCTACAGAACCGTCCTATGGGACA	CTAACTG	TGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCC	ARDPFSTEPSYGTLTVRFDP	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_6551   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAT  91
V  96.2% (279/290)  IGHV1-18*01  7    .....................................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       P  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  D  T  N  Y  A  Q 
                    Query_6551   92   CCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTGACACAAATTATGCACAG  181
V  96.2% (279/290)  IGHV1-18*01  97   GG..........................................................G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  D  L  R  S  L  T  S  D  D  T  A 
                    Query_6551   182  AAGTTCCAGGGCAGAGTCACCTTGACCACAGACACGTCCACGAGCACAGCCTACATGGACCTGAGGAGCCTGACATCTGACGACACGGCC  271
V  96.2% (279/290)  IGHV1-18*01  187  ...C.................A.............A.......................G.............G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------CDR3-IMGT------------------------>                  
                                       V  Y  Y  C  A  R  D  P  F  S  T  E  P  S  Y  G  T  L  T  V  R  F  D  P  W  G  Q  G  T  L 
                    Query_6551   272  GTGTATTACTGTGCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCCTGGGGCCAGGGAACCCTG  361
V  96.2% (279/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (7/7)     IGHD7-27*01  1    ---------------------------------------------------.......--------------------------------  7
J  97.8% (44/45)    IGHJ5*02     7    -------------------------------------------------------------.............................  35

                                                      
                                       V  T  V  S  T  
                    Query_6551   362  GTCACCGTCTCCACAG  377
J  97.8% (44/45)    IGHJ5*02     36   ............T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_287788

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           291     6e-81
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	213	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_6552   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  88.8% (213/240)  IGHV4-59*01  49   ..................A......................T.GT.A...C....G.............C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R 
                    Query_6552   91   TGGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGA  180
V  88.8% (213/240)  IGHV4-59*01  139  .......GG.....C.ATT................C..C...........C.....................G.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G 
                    Query_6552   181  CACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGT  270
V  88.8% (213/240)  IGHV4-59*01  229  ..G...........G....G............T..............G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-22*01  7    -----------------------------------------------------------------------------..........A..  19

                                      ----------------------->                                  
                                       G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6552   271  GGCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  328
D  93.3% (14/15)    IGHD3-22*01  20   ..--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    --------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_280250

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           330     1e-92
IGHD5-18*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGTCATGGTTAC	GGAGGAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGTCATGGTTACGGAGGAATTGACTAC	ARYSHGYGGIDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	227	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  F  W  S  W  F  R  L  P  P  G  E  G  L  E 
                    Query_6553   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTTCTGGAGCTGGTTCCGGCTGCCCCCAGGGGAGGGACTGGAG  90
V  93.4% (227/243)  IGHV4-59*08  49   ..........................................A......A..........A......A..........A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  L  Y  S  G  S  T  N  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6553   91   TGGATTGGGTATATCCTTTATAGTGGGAGTACCAACTACAATCCCTCCCTGAAGGGTCGAGTCACAATATCAGTAGACACGTCCAAGAAC  180
V  93.4% (227/243)  IGHV4-59*08  139  ...............TA...C........C...........C........C...A..........C........................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  I  D 
                    Query_6553   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTTTATTATTGTGCGAGATACAGTCATGGTTACGGAGGAATTGAC  270
V  93.4% (227/243)  IGHV4-59*08  229  ...................G...........................G.....C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  86.7% (13/15)    IGHD5-18*01  6    ---------------------------------------------------------------.....CT........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6553   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_280253

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           308     4e-86
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TACAATCGCGGCCGACCA	GGCTGGTA	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATACAATCGCGGCCGACCAGGCTGGTAACTACTTCTACGCCATGGACGTC	AKDTIAADQAGNYFYAMDV	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	125	24	16	8	0	66.7
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	233	215	18	0	92.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  R  N  Y  G  M  S  W  V  R  Q  A  P  G  Q  G  L  E  W  V  S  G  I 
                    Query_6554   15   TGTGCAGCCTCTGGATTCACCTTTAGGAACTATGGCATGAGCTGGGTCCGCCAGGCTCCAGGGCAGGGGCTGGAGTGGGTCTCAGGTATT  104
V  92.3% (215/233)  IGHV3-23*01  64   ..........................C.G.....C............................A.....................C....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       T  G  S  G  T  Y  S  Y  Y  A  D  S  V  M  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_6554   105  ACTGGTAGTGGTACTTATAGTTACTACGCAGACTCCGTGATGGGTCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGTTGTATCTG  194
V  92.3% (215/233)  IGHV3-23*01  154  .G..........GG.AGC.CA...................A...C....................................C........  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------------CDR3-IMGT------------
                                       Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  K  D  T  I  A  A  D  Q  A  G  N  Y  F  Y 
                    Query_6554   195  CAAATGAACAGCCTGAGACCCGAGGACACGGCCTTATATTACTGTGCGAAAGATACAATCGCGGCCGACCAGGCTGGTAACTACTTCTAC  284
V  92.3% (215/233)  IGHV3-23*01  244  ..................G..............G...................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (8/8)     IGHD6-19*01  13   -----------------------------------------------------------------------........-----------  20
J  92.9% (52/56)    IGHJ6*02     7    -------------------------------------------------------------------------------......A....  17

                                      ----------->                                 
                                       A  M  D  V  W  G  Q  G  T  T  V  T  A  S  S 
                    Query_6554   285  GCCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGCCTCCTCA  329
J  92.9% (52/56)    IGHJ6*02     18   .GT..................................T.......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_280254

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           434     4e-124
IGHD3-10*01                                                                                           12.2    37    
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTCAATT	TGGTTC	CGCAAATGG	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTCAATTTGGTTCCGCAAATGGCTACCAGTACGGCATGGACGTC	ARFQFGSANGYQYGMDV	291	341	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	70	1	0	98.6
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	113	1	0	99.1
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	290	284	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  P  H  
                    Query_6555   7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTAAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTCCCCACT  96
V  97.9% (284/290)  IGHV5-51*03  5    .................................................G.................................A..AG..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  S  
                    Query_6555   97   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACAGCC  186
V  97.9% (284/290)  IGHV5-51*03  95   ..................................................................G.......................  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_6555   187  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCG  276
V  97.9% (284/290)  IGHV5-51*03  185  .............................................G............................................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><--------------------CDR3-IMGT-------------------->                         
                                      A  M  Y  Y  C  A  R  F  Q  F  G  S  A  N  G  Y  Q  Y  G  M  D  V  W  G  Q  G  T  T  V  T  
                    Query_6555   277  CCATGTATTACTGTGCGAGATTTCAATTTGGTTCCGCAAATGGCTACCAGTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCG  366
V  97.9% (284/290)  IGHV5-51*03  275  ....................----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD3-10*01  10   ----------------------------......--------------------------------------------------------  15
J  94.5% (52/55)    IGHJ6*02     8    -------------------------------------------....T.C.....T..................................  54

                                              
                                      V  S  S 
                    Query_6555   367  TCTCCTCA  374
J  94.5% (52/55)    IGHJ6*02     55   ........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_280255

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           294     6e-82
IGHD3-3*01                                                                                            10.3    122  
IGHJ2*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACAG	TTTTT	CTCCCCCGTCGGACTTCTT	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATAACAGTTTTTCTCCCCCGTCGGACTTCTTCTTCGATCTC	VRDNSFSPPSDFFFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  K  N  Y  N  M  N  W  V  R  Q  A  P  G  K  R  L  
                    Query_6556   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTCAAGAACTACAACATGAACTGGGTCCGCCAGGCTCCAGGGAAGCGGCTGG  90
V  87.6% (219/250)  IGHV3-21*01  47   .....................C....................GT.G...T.G...............................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  G  R  N  N  D  I  H  Y  A  D  S  M  K  G  R  I  T  I  S  R  D  N  A  
                    Query_6556   91   AGTGGGTCTCATCGATTAGAGGTAGAAACAATGACATCCACTACGCAGACTCAATGAAGGGCCGAATCACCATCTCCAGAGACAACGCCA  180
V  87.6% (219/250)  IGHV3-21*01  137  .............C.....TA....T.GT.G.T....AT..............G...........T........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  N  S  L  Y  L  H  M  H  S  L  G  A  E  D  T  A  I  Y  F  C  V  R  D  N  S  F  S  P  P  
                    Query_6556   181  ACAACTCACTCTATCTCCACATGCACAGCCTGGGAGCCGAGGACACGGCTATCTATTTCTGCGTCAGAGATAACAGTTTTTCTCCCCCGT  270
V  87.6% (219/250)  IGHV3-21*01  227  .G........G.....G..A...A........A.................G.G....A...T.CG.....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-3*01   10   ----------------------------------------------------------------------------.....---------  14

                                      T------------------>                                  
                                      S  D  F  F  F  D  L  W  G  R  G  T  P  V  S  V  S  S  
                    Query_6556   271  CGGACTTCTTCTTCGATCTCTGGGGCCGTGGCACCCCAGTCTCTGTCTCCTCAG  324
J  93.2% (41/44)    IGHJ2*01     10   ----------..........................TG...A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_280256

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           369     2e-104
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CCGGAGGCAAAGGCCCCAAG	ATTACTATGGTTCGGGGAGTT	CA	TACAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCCGGAGGCAAAGGCCCCAAGATTACTATGGTTCGGGGAGTTCATACAACTACTACGGTATGGGCGTC	ARRQRPQDYYGSGSSYNYYGMGV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	240	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6557   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.4% (240/244)  IGHV3-33*01  47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  L  T  I  S  G  D  N  S  
                    Query_6557   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGACTCACCATCTCCGGAGACAATTCCA  180
V  98.4% (240/244)  IGHV3-33*01  137  .................................................................T...........A............  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  R  Q  R  P  Q  D  Y  
                    Query_6557   181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCCCGGAGGCAAAGGCCCCAAGATTACT  270
V  98.4% (240/244)  IGHV3-33*01  227  ..............C.................................................--------------------------  290
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (21/21)   IGHD3-10*01  3    ------------------------------------------------------------------------------------......  8

                                      --CDR3-IMGT----------------------------->                                 
                                      Y  G  S  G  S  S  Y  N  Y  Y  G  M  G  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_6557   271  ATGGTTCGGGGAGTTCATACAACTACTACGGTATGGGCGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  344
D  100.0% (21/21)   IGHD3-10*01  9    ...............-----------------------------------------------------------  23
J  94.7% (54/57)    IGHJ6*02     6    -----------------...T...............A...........A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_280257

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         329     3e-92
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACTTTGACTTC	ARVSTSAYYFDF	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	5	2	0	71.4
Total	N/A	N/A	250	230	20	0	92


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_6558     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGTAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  92.0% (230/250)  IGHV4-30-4*01  49   ..................A......................C.......A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  F  D  T  S 
                    Query_6558     91   CTGGAGTGGATTGGGTACATCTACTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCCTTTGACACGTCC  180
V  92.0% (230/250)  IGHV4-30-4*01  139  .......................T..................................................A..AG.A.........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                         K  R  Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  Y  Y 
                    Query_6558     181  AAGAGGCAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATACTAC  270
V  92.0% (230/250)  IGHV4-30-4*01  229  ....AC.............A....AGC........T..C..A...........G...........CA...--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-2*01     17   ---------------------------------------------------------------------------......---------  22
J  91.3% (42/46)    IGHJ4*02       1    -------------------------------------------------------------------------------------.....  5

                                        -------->                                
                                         F  D  F  W  G  R  G  T  L  V  V  V  S  S
                    Query_6558     271  TTTGACTTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  311
J  91.3% (42/46)    IGHJ4*02       6    .......A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_280258

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6559   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (226/248)  IGHV3-21*01  47   ............................T............AG...C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  G  
                    Query_6559   91   AGTGGGTCTCATCCATCAGTAGTAGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  91.1% (226/248)  IGHV3-21*01  137  ................T........T...AGT......T.C..C..A......G..A..............................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_6559   181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  91.1% (226/248)  IGHV3-21*01  227  ....C..................AA...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6559   271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_182266

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD3-3*01                                                                                            37.2    1e-06
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTCGGGGGACACGA	ATTACGATTTTTGGAGTGG	GGGTGTTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATTCGGGGGACACGAATTACGATTTTTGGAGTGGGGGTGTTCTTGATATC	AKDSGDTNYDFWSGGVLDI	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6560   1    GGTCCCTGAGACTCTCCTGTGCAGCATCTGGATTCACCTTTAGCAGTTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   .........................C....................C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  F  N  T  N  Y  A  E  S  E  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6560   91   AGTGGGTCTCAGGTATTAGTGGCAGTGGTTTTAATACAAACTATGCAGAGTCCGAGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  92.8% (232/250)  IGHV3-23*01  137  ............C.........T......GG..GC...T....C.....C....T...............................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  D  S  G  D  T  N  Y  
                    Query_6560   181  AGAACACCCTGTATCTACAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTATATTACTGTGCGAAAGATTCGGGGGACACGAATTACG  270
V  92.8% (232/250)  IGHV3-23*01  227  .......G........G...................C............C....................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (19/19)   IGHD3-3*01   3    ------------------------------------------------------------------------------------......  8

                                      -IMGT----------------------->                                  
                                      D  F  W  S  G  G  V  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6560   271  ATTTTTGGAGTGGGGGTGTTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  333
D  100.0% (19/19)   IGHD3-3*01   9    .............--------------------------------------------------  21
J  100.0% (42/42)   IGHJ3*02     9    ---------------------..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_74521

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           332     3e-93
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	N/A	GTCTCCCGGAGACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGAGTCTCCCGGAGACGACTACAACGGTATGGACGTC	VKESPGDDYNGMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  R  S  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6561   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGGTTCAGAAGTTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-30*18  47   ....................................CC.....T..C.A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  L  Y  D  G  S  K  T  N  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6561   91   AGTGGGTGGCAGTCATATTATATGATGGAAGTAAAACAAACTATGGAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  92.4% (231/250)  IGHV3-30*18  137  .............T....C...............T.A.T......C......C................................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  T  Y  Y  C  V  K  E  S  P  G  D  D  Y  
                    Query_6561   181  AGAATACGCTGTATCTGCAAATGAACAGCCTAAGAGCTGAGGACACGGCTACATATTACTGTGTGAAAGAGTCTCCCGGAGACGACTACA  270
V  92.4% (231/250)  IGHV3-30*18  227  ....C..........................G..................GTG..........C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
J  96.2% (51/53)    IGHJ6*02     10   ------------------------------------------------------------------------------------.....T  15

                                      ------------->                                 
                                      N  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6561   271  ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  317
J  96.2% (51/53)    IGHJ6*02     16   ...........................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_182267

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            410     1e-116
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGTGAGGAGC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGTGAGGAGCCAGCTCGTATCCGACTTC	ARAVRSQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  S  Y
                    Query_6562  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCAGCAGTTA  90
V  95.2% (276/290)  IGHV1-8*01  6    ..................G................................................................C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  E
                    Query_6562  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCAGA  180
V  95.2% (276/290)  IGHV1-8*01  96   ........A.........................................................C.....................C.  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  G  D  T  S  I  T  T  A  Y  M  E  M  S  S  L  N  S  E  D  T  A
                    Query_6562  181  GAAGTTCCAGGGCAGAGTCACCATGACCGGGGACACTTCCATAACCACAGCCTACATGGAGATGAGCAGCCTAAACTCTGAAGACACGGC  270
V  95.2% (276/290)  IGHV1-8*01  186  ............................A..A....C.......G................C..........G.GA.....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  V  R  S  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6562  271  CGTGTATTACTGTGCGAGAGCGGTGAGGAGCCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.2% (276/290)  IGHV1-8*01  276  ....................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_112667

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           257     1e-70
IGHD2-15*01                                                                                           12.2    32   
IGHJ5*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TGGTGG	CGGACGGGGGCTCGATTGGGGTGCGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTGGCGGACGGGGGCTCGATTGGGGTGCGGTGGTTCGACACC	ARLVADGGSIGVRWFDT	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	13	8	0	61.9
FR3-IMGT	124	237	114	96	18	0	84.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	204	40	0	83.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  I  R  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  T  L  E 
                    Query_6563   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGCCTCCATTAGAAGTTATTACTGGAGTTGGGTTCGCCAGCCCCCCGGCAAGACACTGGAG  90
V  83.6% (204/244)  IGHV4-59*08  49   ...................C...........G......C..T.....C........C...A.C..G........A..G...GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  F  H  T  D  T  T  N  Y  H  P  S  L  K  S  R  V  T  I  S  S  D  T  S  K  N 
                    Query_6563   91   TGGATTGGCTATTTCTTTCACACCGACACCACCAATTACCATCCCTCCCTCAAGAGTCGAGTCACCATTTCATCAGACACGTCCAAGAAC  180
V  83.6% (204/244)  IGHV4-59*08  139  ........G...A...A.T...GT.GG.G......C...A.C..........................A...GT................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       I  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  V  A  D  G  G  S  I  G 
                    Query_6563   181  ATCTTCTCATTGACTCTGACGTCTGTGACCGCCGCAGACACGGCCGTCTATTTTTGTGCGAGACTGGTGGCGGACGGGGGCTCGATTGGG  270
V  83.6% (204/244)  IGHV4-59*08  229  CAG.....CC...AG....GC..........................G....AC..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-15*01  13   ----------------------------------------------------------------......--------------------  18

                                      ----------------->                                  
                                       V  R  W  F  D  T  W  G  R  G  T  L  V  S  V  S  S  
                    Query_6563   271  GTGCGGTGGTTCGACACCTGGGGCCGGGGAACGCTGGTCAGCGTCTCATCAG  322
J  89.1% (41/46)    IGHJ5*02     6    ------.........C.........A......C.......C......C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_112666

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*14                                                                                           408     4e-116
IGHD5-18*01                                                                                           18.0    0.65  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*14	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGCCCC	GGATACGGCCATGGT	CTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGCCCCGGATACGGCCATGGTCTTC	ARVAPDTAMVF	292	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	71	4	0	94.7
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	295	278	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  A  S  G  V  T  F  N 
                    Query_6564   4    CAGGTCCAGCTTGTGCAGTCTGGAGCCGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGGCTTCTGGAGTCACCTTCAAC  93
V  94.2% (278/295)  IGHV1-69*14  1    ...........G...........G..T........................................A...........G........G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  A  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  L  P  F  F  G  T  A  T  Y 
                    Query_6564   94   AGCTATGCCATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCCTCCCTTTCTTTGGTACAGCAACATAC  183
V  94.2% (278/295)  IGHV1-69*14  91   ........T....G.................................................A.....A...............AC...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  G  T  A  Y  M  E  L  S  S  L  R  S  D  D 
                    Query_6564   184  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGGGCACAGCGTACATGGAACTGAGCAGCCTGAGATCTGACGAC  273
V  94.2% (278/295)  IGHV1-69*14  181  ................................................A.......C........G....................G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------CDR3-IMGT----------->                                  
                                       T  A  V  F  Y  C  A  R  V  A  P  D  T  A  M  V  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6564   274  ACGGCCGTGTTTTACTGTGCGAGAGTTGCCCCGGATACGGCCATGGTCTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  94.2% (278/295)  IGHV1-69*14  271  ..........A..............------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                              
D  86.7% (13/15)    IGHD5-18*01  3    --------------------------------......A..T.....--------------------------------------  17
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_112663

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            397     8e-113
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_6565  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.8% (272/290)  IGHV1-8*02  6    .............................................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_6565  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.8% (272/290)  IGHV1-8*02  96   ........A.........................................................C.......................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_6565  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.8% (272/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6565  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.8% (272/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_112662

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           325     3e-91
IGHD1-1*01                                                                                            14.1    8.4  
IGHJ3*01                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGG	CAACTGG	CGCCGAAGCCGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGGCAACTGGCGCCGAAGCCGGTGCTTTAGATGTC	ARDPATGAEAGALDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  R  K  Y  A  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6566   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTCCGCAAATATGCTCTGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  91.6% (229/250)  IGHV3-64*01  47   ......................................T..A.T.GC......A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  G  I  S  G  D  G  G  T  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6566   91   AATTTGTTTCAGGTATCAGTGGTGATGGGGGGACCACTTATTATGCAAACTCTGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  91.6% (229/250)  IGHV3-64*01  137  ...A........C...T...A..A.......T.G...A....................................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  V  G  R  L  R  L  E  D  M  G  V  Y  Y  C  A  R  D  P  A  T  G  A  E  
                    Query_6566   181  AGAACACGCTGTATCTTCAAGTGGGCAGACTGAGACTTGAGGACATGGGTGTTTACTACTGTGCGAGAGATCCGGCAACTGGCGCCGAAG  270
V  91.6% (229/250)  IGHV3-64*01  227  ....................A.......C......GC...........C...G..T..............--------------------  296
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------------------------------------------------------.......--------  11

                                      ---------------->                                  
                                      A  G  A  L  D  V  W  G  E  G  T  V  V  T  V  S  P  
                    Query_6566   271  CCGGTGCTTTAGATGTCTGGGGCGAAGGGACAGTGGTCACCGTGTCTCCAG  321
J  89.4% (42/47)    IGHJ3*01     4    ----......T............C........A..........C...T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_112661

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           439     2e-125
IGHD3-22*01                                                                                           23.8    0.012 
IGHJ3*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGCCA	A	TATGATAGTAGT	ACTTATAAGGGGGGGTTC	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCAATATGATAGTAGTACTTATAAGGGGGGGTTCGCTTTTGATATC	ASQYDSSTYKGGFAFDI	291	341	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	74	0	0	100
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	112	2	0	98.2
CDR3-IMGT (germline)	291	298	8	7	1	0	87.5
Total	N/A	N/A	295	288	7	0	97.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  F  T  
                    Query_6567   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGGTTTACCA  93
V  97.6% (288/295)  IGHV5-51*01  2    ..................................................................................C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  
                    Query_6567   94   CCTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACA  183
V  97.6% (288/295)  IGHV5-51*01  92   G...........G........................................................G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  L  W  S  S  L  K  A  S  D  
                    Query_6567   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCTGTGGAGCAGCCTGAAGGCCTCGGACC  273
V  97.6% (288/295)  IGHV5-51*01  182  ...............................................................A.........................A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      P  A  M  Y  Y  C  A  S  Q  Y  D  S  S  T  Y  K  G  G  F  A  F  D  I  W  G  Q  G  T  M  V  
                    Query_6567   274  CCGCCATGTATTACTGTGCGAGCCAATATGATAGTAGTACTTATAAGGGGGGGTTCGCTTTTGATATCTGGGGCCAAGGGACAATGGTCA  363
V  97.6% (288/295)  IGHV5-51*01  272  ......................A..-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD3-22*01  8    --------------------------............----------------------------------------------------  19
J  100.0% (46/46)   IGHJ3*02     5    --------------------------------------------------------..................................  38

                                                  
                                      T  V  S  S  
                    Query_6567   364  CCGTCTCTTCAG  375
J  100.0% (46/46)   IGHJ3*02     39   ............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_112660

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           330     1e-92
IGHD5-18*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGTT	TGGATACAG	GTTAAGGGAATCAAACTTGAACTCCACCTC	CGGTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGTTTGGATACAGGTTAAGGGAATCAAACTTGAACTCCACCTCCGGTGTGGACGTC	AGFGYRLRESNLNSTSGVDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6568   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCCGGATTCACCTTCAGCACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.1% (228/245)  IGHV3-33*01  47   ............................T..............T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  F  D  G  S  N  E  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6568   91   AGTGGGTGGCACTTATCTGGTTTGATGGATCTAATGAAAAGTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (228/245)  IGHV3-33*01  137  ...........G....A....A.......AG....A..T.C.................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  G  F  G  Y  R  L  R  E  
                    Query_6568   181  AGAACACGTTGTATTTAGAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTCTATTACTGTGCGGGGTTTGGATACAGGTTAAGGGAAT  270
V  93.1% (228/245)  IGHV3-33*01  227  ........C.....C.GC..................C...............G............-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD5-18*01  2    ----------------------------------------------------------------------.........-----------  10

                                      R3-IMGT------------------------>                                 
                                      S  N  L  N  S  T  S  G  V  D  V  W  G  Q  G  T  T  V  T  I  S  S 
                    Query_6568   271  CAAACTTGAACTCCACCTCCGGTGTGGACGTCTGGGGCCAAGGGACCACGGTCACCATCTCCTCA  335
J  95.7% (44/46)    IGHJ6*02     17   -------------------....A................................G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_182265

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           439     2e-125
IGHD3-3*01                                                                                            41.1    8e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACGCCT	CGATTTTTGGAGTGGTTATTGTAC	GAGAATCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTAC	ARYASIFGVVIVRESFDY	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	285	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_6569   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  98.6% (285/289)  IGHV5-51*01  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_6569   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACTAGATACAGCCC  180
V  98.6% (285/289)  IGHV5-51*01  96   ............................................................T.................C...........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  T  S  T  T  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6569   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCACCAGCACCACCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.6% (285/289)  IGHV5-51*01  186  .........................................T.......G........................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  Y  A  S  I  F  G  V  V  I  V  R  E  S  F  D  Y  W  G  Q  G  T  L  V  T
                    Query_6569   271  CATGTATTACTGTGCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTACTGGGGCCAGGGAACCCTGGTCAC  360
V  98.6% (285/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  95.8% (23/24)    IGHD3-3*01   7    --------------------------....................A...----------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    ----------------------------------------------------------................................  37

                                                 
                                        V  S  S  
                    Query_6569   361  CGTCTCCTCAG  371
J  100.0% (43/43)   IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_277135

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           399     3e-113
IGHD6-6*01                                                                                            19.9    0.17  
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TA	TATAGGAGCTCGT	TCTTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATATAGGAGCTCGTTCTTGGTCTGACTAC	ARYIGARSWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  G  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_6570   1    GCAGCTGGGGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  94.1% (272/289)  IGHV5-51*03  6    ........T.....................................................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  D  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_6570   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGACCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  94.1% (272/289)  IGHV5-51*03  96   ...................................G...............G............................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  G  S  R  L  K  A  A  D  A  A
                    Query_6570   181  GTCCTTCCAAGGACAGGTCACCATCTCAGCAGACAAGTCCATCAGCACCGCCTACCTGCAGGGGAGCCGACTGAAGGCCGCGGACGCCGC  270
V  94.1% (272/289)  IGHV5-51*03  186  ............C.................C..............................T.....A.C.........T.....A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        I  Y  Y  R  A  R  Y  I  G  A  R  S  W  S  D  Y  W  G  Q  G  P  L  V  T  V  S  S
                    Query_6570   271  AATCTATTACCGTGCGAGATATATAGGAGCTCGTTCTTGGTCTGACTACTGGGGCCAGGGCCCCCTGGTCACCGTCTCCTC  351
V  94.1% (272/289)  IGHV5-51*03  276  C..G......T........--------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                               
D  92.3% (12/13)    IGHD6-6*01   4    ---------------------.....C.......-----------------------------------------------  16
J  94.9% (37/39)    IGHJ4*02     8    ------------------------------------------..................AA...................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_112669

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TGGGCCTC	CTATGATAATAGTGGTCATTAC	GGCCCGCGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATGGGCCTCCTATGATAATAGTGGTCATTACGGCCCGCGATTTGACTCC	AKWASYDNSGHYGPRFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  D  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6571   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGGGATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.5% (227/248)  IGHV3-23*01  47   ..............................................CT..........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  H  S  V  D  H  T  F  Y  A  D  S  V  K  G  R  F  I  V  S  R  D  N  S  
                    Query_6571   91   AGTGGGTCTCAAGTATTAGTCATAGTGTTGATCACACATTCTACGCAGACTCCGTGAAGGGCCGATTCATCGTCTCCAGAGACAATTCCA  180
V  91.5% (227/248)  IGHV3-23*01  137  ...........GC.......GG.....G..G.AG.....A........................G....C.A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  L  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  W  A  S  Y  D  N  S  
                    Query_6571   181  AGAACACTCTCTATCTGCTAATGAGTAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAATGGGCCTCCTATGATAATAGTG  270
V  91.5% (227/248)  IGHV3-23*01  227  .......G..G.......A.....AC..........................A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.9% (20/22)    IGHD3-22*01  7    ----------------------------------------------------------------------------........G.....  20

                                      IMGT--------------------->                                
                                      G  H  Y  G  P  R  F  D  S  W  G  Q  G  A  L  V  T  V  S  S
                    Query_6571   271  GTCATTACGGCCCGCGATTTGACTCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTC  328
D  90.9% (20/22)    IGHD3-22*01  21   ..T.....--------------------------------------------------  28
J  95.1% (39/41)    IGHJ4*02     6    -----------------.......A.............A...................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_112668

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           357     1e-100
IGHD3-22*01                                                                                           14.1    8.4   
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGA	TATGATGGTA	ATGATAAAGC	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGATATGATGGTAATGATAAAGCTGCTTTTGACATC	AREGYDGNDKAAFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6572   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAGATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-48*03  47   ....................................................A.....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  T  T  G  G  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6572   91   AGTGGATTTCATATATTAGTACTACTGGTGGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (239/250)  IGHV3-48*03  137  .....G.......C.......G..G....A............................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  G  Y  D  G  N  D  
                    Query_6572   181  AGAACTCACTATTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTGCGAGAGAGGGATATGATGGTAATGATA  270
V  95.6% (239/250)  IGHV3-48*03  227  ..........G.A.....................................G.......C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-22*01  8    --------------------------------------------------------------------------......A...------  17

                                      ---------------->                                  
                                      K  A  A  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_6572   271  AAGCTGCTTTTGACATCTGGGGCCAAGGGACAATGGTCATCGTCTCTTCAG  321
J  95.7% (45/47)    IGHJ3*02     4    ----.........T.........................C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_188978

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           260     1e-71
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	93	21	0	81.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	205	39	0	84


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_6573   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  84.0% (205/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_6573   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  84.0% (205/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_6573   181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACGTAT  270
V  84.0% (205/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_6573   271  GTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    ---------------------------------...G....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_247985

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAAA	AATAAAAGAGC	AGCAGTGCCTGCTAC	GGGGGGTGCCTCAGTAT	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAAATAAAAGAGCAGCAGTGCCTGCTACGGGGGGTGCCTCAGTATACTATTTTGAATAC	VKNKRAAVPATGGASVYYFEY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  A  M  S  W  V  R  Q  S  P  G  K  G  L  
                    Query_6574   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTTACCTTTAGCAGCTTTGCCATGAGCTGGGTCCGCCAGTCTCCGGGGAAGGGGCTGG  90
V  92.3% (229/248)  IGHV3-23*01  47   .........................C........C.............A......................G....A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  V  L  S  G  S  G  G  T  P  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_6574   91   AGTGGCTCTCAGTTCTTAGTGGCAGTGGTGGTACCCCATACTACGCAGACTCCGTGAGGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.3% (229/248)  IGHV3-23*01  137  .....G......C.A.......T..........G.A.....................A................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      R  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  A  A  V  Y  Y  C  V  K  N  K  R  A  A  V  P  
                    Query_6574   181  GGAACACGCTGTTTTTGCAGATGAACAGCCTGAGAGCCGAGGACGCGGCCGTTTATTACTGTGTGAAAAATAAAAGAGCAGCAGTGCCTG  270
V  92.3% (229/248)  IGHV3-23*01  227  A...........A.C....A........................A.......A..........C....----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  86.7% (13/15)    IGHD6-19*01  7    -------------------------------------------------------------------------------.......G...  17

                                      DR3-IMGT-------------------------->                                  
                                      A  T  G  G  A  S  V  Y  Y  F  E  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6574   271  CTACGGGGGGTGCCTCAGTATACTATTTTGAATACTGGGGCAGGGGCACCCTGGTCACCGTCTCCTCAG  339
D  86.7% (13/15)    IGHD6-19*01  18   G...-----------------------------------------------------------------  21
J  89.6% (43/48)    IGHJ4*02     1    ---------------------....C.....C.........CA...A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_328586

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           327     9e-92
IGHD3-16*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	ACTTA	GGGGGAG	ACCAACAATGGGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACTTAGGGGGAGACCAACAATGGGGGGACTACTTTGGCAAC	ANLGGDQQWGDYFGN	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	225	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  E  L  E 
                    Query_6575   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATAGTTACTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAAGAACTGGAG  90
V  93.4% (225/241)  IGHV4-59*08  49   ...............................G........G.........C.............................G.G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  G  R  V  T  M  S  I  D  T  S  K  S 
                    Query_6575   91   TGGATTGGCTATGTCTATTACAGTGGGAGTACCAACTACAACCCCTCCCTTAAGGGTCGAGTCACCATGTCAATAGACACGTCCAAGAGC  180
V  93.4% (225/241)  IGHV4-59*08  139  ........G...A................C....................C...A.............A...G...............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  N  L  G  G  D  Q  Q  W  G  D 
                    Query_6575   181  CAGTTCTCACTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTATATTACTGTGCGAACTTAGGGGGAGACCAACAATGGGGGGAC  270
V  93.4% (225/241)  IGHV4-59*08  229  ........C..........G...........................G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD3-16*01  18   ------------------------------------------------------------------.......-----------------  24
J  93.8% (45/48)    IGHJ4*02     1    ----------------------------------------------------------------------------------------..  2

                                      ----------->                                  
                                       Y  F  G  N  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_6575   271  TACTTTGGCAACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  316
J  93.8% (45/48)    IGHJ4*02     3    .......A.T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_247984

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           330     1e-92
IGHD4-4*01                                                                                            14.1    8.3  
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-4*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAAACT	TAACTAC	GCGGGTGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAAACTTAACTACGCGGGTGGTTTTGATGTC	ARDKLNYAGGFDV	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	231	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  N  S  G  V  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6576   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAATAGTGGTGTTCATTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  92.0% (231/251)  IGHV4-31*03  49   ...................C....................GC.......G.T.C........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  Y  S  G  S  T  Y  Y  S  P  S  L  K  S  R  L  S  I  S  V  D  T  S 
                    Query_6576   91   CTGGAGTGGATTGGGTACATCTCTTACAGTGGGAGTACCTACTACAGCCCGTCCCTCAAGAGTCGACTTTCTATATCAGTAGACACGTCT  180
V  92.0% (231/251)  IGHV4-31*03  139  ......................A............C..........A...................G..A.C..................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  R  L  G  S  V  T  A  A  D  T  A  M  Y  F  C  A  R  D  K  L  N  Y  A  G 
                    Query_6576   181  AAGAATCAGTTCTCCCTGAGGTTGGGCTCTGTGACTGCCGCAGACACGGCCATGTATTTCTGTGCGAGAGACAAACTTAACTACGCGGGT  270
V  92.0% (231/251)  IGHV4-31*03  229  .....C.............A.C..A................G.........G......A............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD4-4*01   10   -----------------------------------------------------------------------------.......------  16

                                      ----------->                                  
                                       G  F  D  V  W  G  Q  G  I  M  V  T  V  S  S  
                    Query_6576   271  GGTTTTGATGTCTGGGGCCAAGGGATAATGGTCACCGTCTCTTCAG  316
J  97.7% (43/44)    IGHJ3*01     7    --.......................C....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_188970

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           360     1e-101
IGHD2-2*01                                                                                            12.2    36    
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGGGCATTCGGGCCTCTGGTC	CCAGCT	T	GTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGGGCATTCGGGCCTCTGGTCCCAGCTTGTTCGGCCCC	AKGGIRASGPSLFGP	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	260	30	0	89.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  T  S  G  G  I  L  N  N  Y
                    Query_6577   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACCTCTGGAGGCATTTTGAACAACTA  90
V  89.7% (260/290)  IGHV1-69*01  6    ..................G.............................................G.T..........CC..C.G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  N  W  L  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  M  P  I  F  G  P  A  N  Y  A  Q
                    Query_6577   91   TGGGATCAATTGGCTCCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCATCATGCCTATCTTTGGTCCAGCAAACTACGCACA  180
V  89.7% (260/290)  IGHV1-69*01  96   ..CT....GC...G.G......................................G.....C............A................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  N  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  S
                    Query_6577   181  GAAGTTCCAGGGCAGAGTCACCATTACCGCGGACGAGTCCACAAACACAGCCTACATGGAATTGAGCAGCCTGAGATCGGAGGACACATC  270
V  89.7% (260/290)  IGHV1-69*01  186  .....................G..............A.....G.G...............GC................T........GG.  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  S  F  C  A  K  G  G  I  R  A  S  G  P  S  L  F  G  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6577   271  CGTGTCCTTCTGTGCGAAAGGGGGCATTCGGGCCTCTGGTCCCAGCTTGTTCGGCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  89.7% (260/290)  IGHV1-69*01  276  .....AT.A........G..----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD2-2*01   18   -----------------------------------------......-------------------------------------------  23
J  97.7% (43/44)    IGHJ5*02     8    ------------------------------------------------.....A....................................  49

                                        
                                        
                    Query_6577   361  AG  362
J  97.7% (43/44)    IGHJ5*02     50   ..  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_188971

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           347     7e-98
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGTCCCTC	ACGGTGAC	CTAGATT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGACGTCCCTCACGGTGACCTAGATTCC	ARDVPHGDLDS	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  S  T  F  S  S  F  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6578   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATCCACCTTCAGTAGCTTCTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-74*01  47   .................................T..............A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  I  T  V  D  G  S  G  T  V  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6578   91   AGTGGGTCTCACGCATTACTGTTGATGGCAGTGGCACAGTCTATGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-74*01  137  T............T....A.AG......G...A.....AG...C..............................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  V  P  H  G  D  L  
                    Query_6578   181  AGAACACGTTGTATCTGCAAATGAACAGTCTGAGAGCCGACGACACGGCTGTGTATTACTGTGCAAGAGACGTCCCTCACGGTGACCTAG  270
V  94.4% (236/250)  IGHV3-74*01  227  ........C...............................G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD4-17*01  6    ------------------------------------------------------------------------------........----  13

                                      ---->                                  
                                      D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6578   271  ATTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (36/36)   IGHJ5*02     16   ---....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_188972

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              48.8    7e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCCCCCCC	ARGLGRRWFPP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6579   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ......................................C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_6579   91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  P  P 
                    Query_6579   181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCCCCCCC  270
V  90.6% (221/244)  IGHV4-59*01  229  ...........G...C....C...........T............G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  84.8% (39/46)    IGHJ5*02     6    ------------------------------------------------------------------------------......GA....  17

                                                                        
                                       G  G  Q  G  A  L  V  S  V  S  P  
                    Query_6579   271  GGGGGCCAGGGGGCCCTGGTCTCCGTCTCCCCAG  304
J  84.8% (39/46)    IGHJ5*02     18   T..........AA........A........T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_188974

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           294     6e-82
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AATATTCACCACAA	TATGGT	ATCCGGCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGAAATATTCACCACAATATGGTATCCGGCCGACTAT	GREIFTTIWYPADY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  R  F  S  D  Y  S  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_6580   1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGTTTCAGGTTCAGTGACTATTCCATGCACTGGGTCCGCCAGGCTCCAGGCAGGGGGCTGG  90
V  87.6% (219/250)  IGHV3-33*01  47   ....................G..........A....CC......AG....GG.............................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  L  W  S  D  G  I  D  T  Q  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  S  
                    Query_6580   91   AGTGGGTGGCGATTCTCTGGTCCGATGGAATTGACACACAGTATGCAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCA  180
V  87.6% (219/250)  IGHV3-33*01  137  ..........AG..A.A....AT.......G.A.T.A.T.C............................C....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  G  V  Y  Y  C  G  R  E  I  F  T  T  I  W  
                    Query_6580   181  AGAACACTCTATATCTACAAATGAACAGCCTGCGGGCCGAGGACACGGGTGTCTATTATTGTGGGAGAGAAATATTCACCACAATATGGT  270
V  87.6% (219/250)  IGHV3-33*01  227  .......G..G.....G...............A.A.............C...G.....C....C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01  8    ------------------------------------------------------------------------------------......  13

                                      ------------->                                  
                                      Y  P  A  D  Y  W  G  Q  G  T  L  V  S  V  S  A  
                    Query_6580   271  ATCCGGCCGACTATTGGGGCCAGGGAACCCTGGTCAGCGTCTCCGCAG  318
J  92.5% (37/40)    IGHJ4*02     9    --------.....C......................C.......T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_188975

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            364     5e-103
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	CGTTCGG	ATGGTTCGGGGAGTT	CCTA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGCGTTCGGATGGTTCGGGGAGTTCCTAGGTATGGACGTC	AKAFGWFGEFLGMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  K  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6581   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAAAGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.8% (241/249)  IGHV3-9*01   47   ....................................C....G.T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  R  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6581   91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGGATAGGCTATGCGGATTCTGTGAAGGGCCGATTCACCATCTCAAGAGACAACGCCA  180
V  96.8% (241/249)  IGHV3-9*01   137  ..................................C..............C..........................C.............  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  L  Y  Y  C  A  K  A  F  G  W  F  G  E  
                    Query_6581   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGCGAGGTGAGGACACGGCCTTGTATTACTGTGCAAAAGCGTTCGGATGGTTCGGGGAGT  270
V  96.8% (241/249)  IGHV3-9*01   227  ................................A...C................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD3-10*01  9    ----------------------------------------------------------------------------..............  22

                                      ---------------->                                 
                                      F  L  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6581   271  TCCTAGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
D  100.0% (15/15)   IGHD3-10*01  23   .-------------------------------------------------  23
J  100.0% (45/45)   IGHJ6*02     18   -----.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_188976

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD7-27*01                                                                                           14.1    8.3   
IGHJ5*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CGTCA	AACTGGG	AACTCAATAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGGGACGTCAAACTGGGAACTCAATATACAACTGGTTCGACCCC	SGRQTGNSIYNWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	243	6	4	2	0	66.7
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6582   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.9% (238/243)  IGHV4-59*01  49   .......................................................G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6582   91   TGGATTGGATATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  ........G.................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  G  R  Q  T  G  N  S  I  Y  N 
                    Query_6582   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTTCGGGACGTCAAACTGGGAACTCAATATACAAC  270
V  97.9% (238/243)  IGHV4-59*01  229  .............A...........................................G..A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD7-27*01  3    --------------------------------------------------------------------.......---------------  9
J  98.0% (50/51)    IGHJ5*02     1    -------------------------------------------------------------------------------------.....  5

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  F  S  
                    Query_6582   271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTTCTCAG  316
J  98.0% (50/51)    IGHJ5*02     6    ........................................C.....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_188977

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           411     5e-117
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	CGGATCGGTCCCCACTTCAC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGATCGGTCCCCACTTCACTGATGCTTTTGATATG	ARRIGPHFTDAFDM	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	276	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  M  G  S  G  Y  I  F  T  N  Y
                    Query_6583   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTATGGGTTCTGGATACATTTTTACCAATTA  90
V  95.5% (276/289)  IGHV5-51*03  6    ..............................................................A..............GC.......GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  I  V  Y  P  D  D  S  D  I  R  Y  K  P
                    Query_6583   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATAGGGATCGTCTATCCTGATGACTCTGATATTAGATACAAACC  180
V  95.5% (276/289)  IGHV5-51*03  96   ................................................G......A.........G...........CC.......GC..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  T  S  L  K  A  S  D  T  A
                    Query_6583   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGACCAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (276/289)  IGHV5-51*03  186  .................................................................G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  R  I  G  P  H  F  T  D  A  F  D  M  W  G  Q  G  T  K  L  T  V  S  S  
                    Query_6583   271  CATGTATTACTGTGCGAGACGGATCGGTCCCCACTTCACTGATGCTTTTGATATGTGGGGCCAAGGGACAAAGCTCACCGTCTCTTCAG  359
V  95.5% (276/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
J  94.0% (47/50)    IGHJ3*02     1    ---------------------------------------...............C................T.G...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_115129

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-9*01                                                                                            44.9    5e-09
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGACCTCA	TACGATATTTTGACTGGTTATTA	ACAGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGACCTCATACGATATTTTGACTGGTTATTAACAGCTTTTGACTAC	ARGDLIRYFDWLLTAFDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  R  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6584   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCGTTCAGAGGTTACTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (233/245)  IGHV4-34*01  49   ...................................C.....T.......A.....G..................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  D  Y  S  G  N  T  D  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6584   91   TGGATTGGGGAAATCGATTATAGTGGAAACACCGACTACAGTCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  ...............A..C.........G....A......AC................................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  L  I  R  Y  F  D  W 
                    Query_6584   181  CAGTTCTCCCTGAAGATGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCGACCTCATACGATATTTTGACTGG  270
V  95.1% (233/245)  IGHV4-34*01  229  ...............C....C............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (23/23)   IGHD3-9*01   5    -------------------------------------------------------------------------.................  21

                                      -------------------->                                  
                                       L  L  T  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6584   271  TTATTAACAGCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  325
D  100.0% (23/23)   IGHD3-9*01   22   ......-------------------------------------------------  27
J  97.7% (42/43)    IGHJ4*02     6    ------------................................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_239937

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           411     5e-117
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	276	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_6585   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.5% (276/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_6585   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.5% (276/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_6585   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCTGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.5% (276/289)  IGHV5-51*03  186  ..............................C..............C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6585   271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.5% (276/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_6585   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_115125

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           347     8e-98
IGHD3-10*01                                                                                           12.2    35   
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCCGATCA	ACTTTGGTT	TCTTGGGACCACAGTCGGGATTG	TACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCCGATCAACTTTGGTTTCTTGGGACCACAGTCGGGATTGTACTCTGACTAC	ARSPINFGFLGPQSGLYSDY	261	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	23	1	0	95.8
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	101	13	0	88.6
CDR3-IMGT (germline)	261	266	6	6	0	0	100
Total	N/A	N/A	266	244	22	0	91.7


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  S  W  I  R  
                    Query_6586   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCCTCAGTGGTTACTACTGGAGCTGGATCCGCC  90
V  91.7% (244/266)  IGHV4-34*01  26   ........T.......T..........................................T..............................  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  K  W  I  G  E  T  N  L  R  G  G  T  N  Y  H  P  S  L  K  S  R  A  S  
                    Query_6586   91   AGCCCCCAGGGAAGGGCCTGAAGTGGATTGGGGAAACCAATCTTCGTGGAGGCACCAACTACCACCCGTCCCTCAAGAGTCGGGCCTCCA  180
V  91.7% (244/266)  IGHV4-34*01  116  ................G...G...............T.....A.A.....A...........A...................A.T.A...  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  T  D  A  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  
                    Query_6586   181  TATCAACGGACGCGTCGAAGAATCAGTTCTCCCTGAAGCTGACGTCTGTGACCGCCGCGGACACGGCTGTATATTACTGTGCGAGAAGCC  270
V  91.7% (244/266)  IGHV4-34*01  206  .....GTA...A....C.....C...................GC..........................G...............----  291
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      ----------------CDR3-IMGT------------------------>                                  
                                      P  I  N  F  G  F  L  G  P  Q  S  G  L  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6586   271  CGATCAACTTTGGTTTCTTGGGACCACAGTCGGGATTGTACTCTGACTACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  354
D  88.9% (8/9)      IGHD3-10*01  6    ------...A.....---------------------------------------------------------------------  14
J  95.7% (44/46)    IGHJ4*02     3    --------------------------------------....T..................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_241216

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           305     3e-85
IGHD3-22*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	AATTCC	GATGGTAGTGGCTAT	CCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAAATTCCGATGGTAGTGGCTATCCCCTTGACTAC	ARNSDGSGYPLDY	230	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	105	9	0	92.1
CDR3-IMGT (germline)	230	235	6	5	1	0	83.3
Total	N/A	N/A	223	209	14	0	93.7


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  A  W  V  A  V  I  W  N  D
                    Query_6587   13   GTCTGGATTTACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGCGTGGGTGGCAGTTATATGGAATGA  102
V  93.7% (209/223)  IGHV3-33*01  72   .........C..........G............................................A...................T....  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  I  L  Y  L  Q  M  N
                    Query_6587   103  TGGAAGTAATAAATACTATGCAGAGTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACATTCTGTATCTGCAAATGAA  192
V  93.7% (209/223)  IGHV3-33*01  162  ........................C..............................................CG.................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------CDR3-IMGT-------------->              
                                        R  L  G  A  E  D  T  A  I  Y  Y  C  A  R  N  S  D  G  S  G  Y  P  L  D  Y  W  G  Q  G  I
                    Query_6587   193  TCGACTGGGAGCCGAGGACACGGCTATTTATTACTGTGCGCGAAATTCCGATGGTAGTGGCTATCCCCTTGACTACTGGGGCCAGGGAAT  282
V  93.7% (209/223)  IGHV3-33*01  252  CA.C...A.................G.G............A..-----------------------------------------------  294
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  86.7% (13/15)    IGHD3-22*01  11   -------------------------------------------------...A.......T...--------------------------  25
J  97.6% (41/42)    IGHJ4*02     7    --------------------------------------------------------------------.....................C  28

                                                          
                                        L  V  T  V  S  S  
                    Query_6587   283  CCTGGTCACCGTCTCCTCAG  302
J  97.6% (41/42)    IGHJ4*02     29   ....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_241215

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           427     1e-121
IGHD3-22*01                                                                                           19.9    0.18  
IGHJ5*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACCCCCCCGGG	GTAGTGGTTA	CTGACGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAACCCCCCCGGGGTAGTGGTTACTGACGGCTGGTTCGGCCCC	ARDNPPGVVVTDGWFGP	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	282	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_6588   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  96.9% (282/291)  IGHV1-69*01  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  K  Y  A  Q
                    Query_6588   91   TGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGAACAGCAAAGTACGCACA  180
V  96.9% (282/291)  IGHV1-69*01  96   ..C.....................................................................T........C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  T  A  D  E  S  T  S  T  V  Y  M  E  L  S  S  L  G  S  E  D  T  A
                    Query_6588   181  GAAGTTCCAGGACAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGGGATCGGAGGACACGGC  270
V  96.9% (282/291)  IGHV1-69*01  186  ...........G......................................C......................A....T...........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  D  N  P  P  G  V  V  V  T  D  G  W  F  G  P  W  G  Q  G  A  L  V  T  V
                    Query_6588   271  CGTTTATTACTGTGCGAGAGATAACCCCCCCGGGGTAGTGGTTACTGACGGCTGGTTCGGCCCCTGGGGCCAGGGAGCCCTGGTCACCGT  360
V  96.9% (282/291)  IGHV1-69*01  276  ...G.................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD3-22*01  15   ----------------------------------..........----------------------------------------------  24
J  93.6% (44/47)    IGHJ5*02     5    ---------------------------------------------------........A................A.............  43

                                              
                                        S  A  
                    Query_6588   361  CTCCGCAG  368
J  93.6% (44/47)    IGHJ5*02     44   ....T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_241214

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           318     6e-89
IGHD6-6*01                                                                                            10.3    122  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCGGCCGCAATGT	GCTCG	CCCAAGACAGGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAAAGTCGGCCGCAATGTGCTCGCCCAAGACAGGTACTACTTTGACTAC	TKVGRNVLAQDRYYFDY	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	24	18	3	3	75
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	249	228	18	3	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  L  G  T  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6589   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCCGGATTCACACTTGGCACCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-23*01  47   .....................C......T........CT..A...G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I     G  S  S  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6589   91   AGTGGGTCTCAACCATT---GGTAGTAGTGGTACTACATACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAATTCCA  177
V  91.6% (228/249)  IGHV3-23*01  137  ...........G.T...AGT......G......GC.............................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  T  K  V  G  R  N  V  L  A  
                    Query_6589   178  GGAACACCCTGTATCTGCAAATGAACAGCCTGACAGCCGAGGACACGGCCGTATATTATTGTACGAAAGTCGGCCGCAATGTGCTCGCCC  267
V  91.6% (228/249)  IGHV3-23*01  227  A......G.........................G........................C...G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD6-6*01   11   ----------------------------------------------------------------------------------.....---  15

                                      GT-------------------->                                  
                                      Q  D  R  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6589   268  AAGACAGGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (48/48)   IGHJ4*02     1    ---------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_115121

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           319     2e-89
IGHD4-17*01                                                                                           16.1    2.5  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GG	CGGTGACT	TCGAGTT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCGGTGACTTCGAGTTACAACTGGTTCGACCCC	ARAVTSSYNWFDP	293	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	67	4	0	94.4
CDR1-IMGT	77	103	27	19	5	3	70.4
FR2-IMGT	104	154	51	47	4	0	92.2
CDR2-IMGT	155	178	24	18	6	0	75
FR3-IMGT	179	292	114	94	20	0	82.5
CDR3-IMGT (germline)	293	297	5	5	0	0	100
Total	N/A	N/A	292	250	39	3	85.6


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><--------CDR1-IMGT-
                                         Q  L  V  Q  S  G  A  E  V  K  T  P  G  S  S  V  K  V  S  C  R  A  S  G  A  S  S  F  S  
                    Query_6590   6    TGCAGCTGGTGCAGTCTGGAGCTGAAGTGAAGACGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGGCTTCTGGGGCCAGCAGTTTCAGCA  95
V  85.6% (250/292)  IGHV1-69*06  5    ...................G.....G.......A.............................A.........A.G..C.---.......  91
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T     F  S  

                                      -------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  G  L  S  W  V  R  Q  A  P  G  Q  G  P  E  W  L  G  G  L  V  P  I  F  E  S  A  T  Y  
                    Query_6590   96   CCTATGGTCTCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGCTGGGAGGGCTCGTCCCTATATTTGAGTCAGCAACCTACG  185
V  85.6% (250/292)  IGHV1-69*06  92   G.....C.A....C............................T.......A........A..A.......C....GTA......A.....  181
                                      S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  K  F  Q  D  R  V  S  I  T  A  D  K  D  S  N  T  G  Y  M  E  L  R  G  L  R  L  E  D  
                    Query_6590   186  CACAGAAGTTTCAAGACAGAGTCTCTATTACCGCGGACAAAGATTCGAACACAGGCTACATGGAACTGAGAGGCCTGAGACTTGAAGACA  275
V  85.6% (250/292)  IGHV1-69*06  182  ..........C..G.G.......A.G...............TCCA...G.....C.........G.....CA........TC...G....  271
                                      A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  A  V  Y  Y  C  A  R  A  V  T  S  S  Y  N  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  A  
                    Query_6590   276  CGGCCGTCTATTATTGTGCGAGGGCGGTGACTTCGAGTTACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCGCAG  365
V  85.6% (250/292)  IGHV1-69*06  272  .......G.....C........--------------------------------------------------------------------  293
                                      T  A  V  Y  Y  C  A                                                                       
D  100.0% (8/8)     IGHD4-17*01  7    ------------------------........----------------------------------------------------------  14
J  96.1% (49/51)    IGHJ5*02     1    ---------------------------------------.......................................C.......T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_241212

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           361     4e-102
IGHD1-7*01                                                                                            16.1    2.2   
IGHJ2*01                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-7*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TCTCAGGGAGTCGG	GGAACTAC	GGAG	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTCTCAGGGAGTCGGGGAACTACGGAGTGGTACTTCGATCTC	ARVSGSRGTTEWYFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6591   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACTTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-74*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  M  K  S  D  G  S  S  T  S  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  A  
                    Query_6591   91   TGTGGGTCTCACGTATGAAAAGCGATGGAAGTAGCACAAGCTACGCGGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (240/249)  IGHV3-74*01  137  ................T..T..T.....G...........................A.................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  S  G  S  R  G  T  
                    Query_6591   181  GGAACACGTTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGTCTCAGGGAGTCGGGGAACTA  270
V  96.4% (240/249)  IGHV3-74*01  227  A.......C............................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-7*01   10   -----------------------------------------------------------------------------------.......  16

                                      T------------------>                                  
                                      T  E  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6591   271  CGGAGTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  100.0% (8/8)     IGHD1-7*01   17   .-----------------------------------------------------  17
J  100.0% (49/49)   IGHJ2*01     5    -----.................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_241211

Length=417
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           399     3e-113
IGHD4-17*01                                                                                           18.0    0.71  
IGHJ6*02                                                                                              85.3    9e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCCGACCGAAGG	GGTGACTAC	GACGAGGGGGA	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCGACCGAAGGGGTGACTACGACGAGGGGGAATTACAACTATTACTACGGCATGGACGTC	ARGPTEGVTTTRGNYNYYYGMDV	290	358	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	73	2	0	97.3
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	104	10	0	91.2
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	275	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  T  F  R 
                    Query_6592   2    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAGG  91
V  93.2% (275/295)  IGHV1-69*12  1    ...........G...........G.......................................................G.........C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  G  I  I  P  V  V  G  T  P  N  Y 
                    Query_6592   92   AATTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGAGGGATCATCCCTGTCGTTGGTACACCAAATTAC  181
V  93.2% (275/295)  IGHV1-69*12  91   .GC................................................A.................A..T........G....C...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  R  F  Q  G  R  V  T  I  T  A  D  E  S  T  N  I  D  F  M  E  L  S  S  L  R  S  E  D 
                    Query_6592   182  GCACAGAGATTCCAGGGCAGAGTCACAATTACCGCGGACGAATCCACGAACATAGACTTCATGGAGTTGAGCAGCCTGAGATCTGAGGAC  271
V  93.2% (275/295)  IGHV1-69*12  181  .......AG.................G......................G..C..C..A.......C.......................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------------------CDR3-IMGT----------------------------->   
                                       T  A  A  Y  Y  C  A  R  G  P  T  E  G  V  T  T  T  R  G  N  Y  N  Y  Y  Y  G  M  D  V  W 
                    Query_6592   272  ACGGCCGCGTATTACTGTGCGAGAGGCCCGACCGAAGGGGTGACTACGACGAGGGGGAATTACAACTATTACTACGGCATGGACGTCTGG  361
V  93.2% (275/295)  IGHV1-69*12  271  .......T.................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (9/9)     IGHD4-17*01  8    --------------------------------------.........-------------------------------------------  16
J  90.3% (56/62)    IGHJ6*02     1    ----------------------------------------------------------.....T....C........T............  32

                                                                    
                                       G  Q  G  T  T  V  I  V  S  S 
                    Query_6592   362  GGCCAAGGGACCACAGTCATCGTCTCTTCA  391
J  90.3% (56/62)    IGHJ6*02     33   ..............G....C......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40919688


Query= Query_115122

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGATCGGG	CTATGAT	GCTTTTGATCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_6593   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-21*01  47   ............................................AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  E  Y  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_6593   91   AGTGGGTCTCATCCATTAGTAGTACTAGTGAATACATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  93.6% (233/249)  IGHV3-21*01  137  ........................G....AGT........C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_6593   181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTT  270
V  93.6% (233/249)  IGHV3-21*01  227  ............A......A..............................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-22*01  7    -------------------------------------------------------------------------------.......----  13

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6593   271  TTGATCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (35/35)   IGHJ4*02     14   -------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_84392

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6594   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  L  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_6594   91   AGTGGGTCTCAGCGATTCTTGGGAGCGGTAGTAGCACATACTACTCAGACTCCGTAAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  .............T...AG...T..T...G..............G..........G...........................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_6594   181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  93.2% (233/250)  IGHV3-23*01  227  ...............................G....................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6594   271  ATTCACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_319485

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         297     7e-83
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	GGAGTCGTAATTAT	CATGGGAATTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGAGTCGTAATTATCATGGGAATTTCTACTTCGACCAC	ARGSRNYHGNFYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	220	30	0	88


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  D  S  V  Y  Y  S  L  N  W  I  R  Q  T  P  L  K  G 
                    Query_6595     1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCATCGACAGTGTTTACTACTCCTTAAACTGGATCCGGCAGACACCACTGAAGGGC  90
V  88.0% (220/250)  IGHV4-30-2*01  49   .......................C...............AG.....G.GGT.......GG.G.............C.....GG.......  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Q  H  S  G  A  T  Y  Y  N  P  S  L  E  S  R  V  S  L  S  V  D  R  S 
                    Query_6595     91   CTGGAGTGGATTGGCTACATCCAGCATTCTGGGGCCACCTACTACAACCCGTCCCTCGAGAGTCGGGTCTCCCTTTCAGTAGACCGGTCC  180
V  88.0% (220/250)  IGHV4-30-2*01  139  ..............G......T.T...AG....AG......................A.......A...A..A.A.........A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  S  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  R  N  Y  H  G 
                    Query_6595     181  AAGAGCCAGTTCTCCCTGAGGCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGAGGGAGTCGTAATTATCATGGG  270
V  88.0% (220/250)  IGHV4-30-2*01  229  ....A..............A.....G...........................G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  85.7% (12/14)    IGHD3-3*01     15   ----------------------------------------------------------------------.....G..T.....------  28

                                        ----------------->                                  
                                         N  F  Y  F  D  H  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_6595     271  AATTTCTACTTCGACCACTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTCAG  322
J  91.5% (43/47)    IGHJ4*02       2    -----......T...T...............C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_319486

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           335     4e-94
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6596   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  92.8% (232/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  K  S 
                    Query_6596   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACAAGTCC  180
V  92.8% (232/250)  IGHV4-31*03  139  ..................................G.................................T.....A..........C...T  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G 
                    Query_6596   181  AAGAATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGTGGGTAGCAGTGGC  270
V  92.8% (232/250)  IGHV4-31*03  229  .....CC.GT..........G....GC........T.................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD6-19*01  6    --------------------------------------------------------------------------------..........  15

                                      ----------->                                
                                       W  L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_6596   271  TGGCTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  314
D  100.0% (13/13)   IGHD6-19*01  16   ...-----------------------------------------  18
J  95.0% (38/40)    IGHJ4*02     7    ----......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_330046

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           276     3e-76
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	44	7	0	86.3
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	215	29	6	86


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  Y  R  Q  P  P  G  K  G  
                    Query_6597   4    CCCTGAGACTCTCCTGTGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTACCGCCAGCCACCAGGGAAGGGCC  93
V  86.0% (215/250)  IGHV4-34*01  50   .....TCC...A....C.....C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  T  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_6597   94   TGGAATGGACTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.0% (215/250)  IGHV4-34*01  134  ....G....T...........A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_6597   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.0% (215/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_6597   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_209866

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           344     6e-97
IGHD6-13*01                                                                                           12.2    30   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	N/A	TGGTAC	TTCCCGACC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGATGGTACTTCCCGACCGACTAC	AGWYFPTDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6598   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (234/248)  IGHV3-48*03  47   ....................................C.....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  S  S  G  D  T  I  T  Y  A  D  S  V  K  G  R  F  A  I  S  R  D  N  A  
                    Query_6598   91   AGTGGCTTTCATACATTAGTAGTAGTGGTGATACCATTACTTACGCAGACTCCGTGAAGGGCCGATTCGCCATCTCCAGAGACAACGCCA  180
V  94.4% (234/248)  IGHV3-48*03  137  .....G.......................AG......ATAC...........T...............A.....................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  L  H  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  G  W  Y  F  P  T  D  Y  
                    Query_6598   181  AGAACTCACTGCATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTATTGTGCGGGATGGTACTTCCCGACCGACTACT  270
V  94.4% (234/248)  IGHV3-48*03  227  ...........T........................C.....................C......A..----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD6-13*01  16   --------------------------------------------------------------------......----------------  21
J  100.0% (40/40)   IGHJ4*02     9    -----------------------------------------------------------------------------------.......  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6598   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (40/40)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_330041

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            333     1e-93
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGGGAACTTCGGA	ATTTTTGGAGTGGT	GCATACCAAGGGGC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGGGAACTTCGGAATTTTTGGAGTGGTGCATACCAAGGGGCTATGGACGTC	ARVGELRNFWSGAYQGAMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  K  F  T  F  R  N  Y  W  T  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6599  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTAAATTCACCTTTAGAAACTATTGGACGAATTGGGTCCGGCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-7*03  47   .............................GG............T.G........T..GC........C......................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  E  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6599  91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGAGAAATACTATGTCGACTCTGTGAAGGGCCGATTCACCATTTCTAGAGACAACGCCA  180
V  92.8% (231/249)  IGHV3-7*03  137  ....................C.........................G..........................C..C.............  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------------CD
                                     K  S  S  L  L  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  E  L  R  N  F  
                    Query_6599  181  AGAGCTCACTACTTCTCCAAATGAACACCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGTAGGGGAACTTCGGAATTTTT  270
V  92.8% (231/249)  IGHV3-7*03  227  ...A......GTA...G..........G.........................................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD3-3*01  9    ------------------------------------------------------------------------------------......  14

                                     R3-IMGT------------------------>                                 
                                     W  S  G  A  Y  Q  G  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6599  271  GGAGTGGTGCATACCAAGGGGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  100.0% (14/14)   IGHD3-3*01  15   ........---------------------------------------------------------  22
J  100.0% (43/43)   IGHJ6*02    20   ----------------------...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_319481

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6600   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-21*01  47   ....................................C.......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_6600   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  92.8% (232/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_6600   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  92.8% (232/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6600   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_242542

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           321     7e-90
IGHD6-19*01                                                                                           18.0    0.60 
IGHJ2*01                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAA	CAGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAACAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQQWLPGDWYFDL	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  R  N  Y  W  S  W  I  R  Q  P  P  G  E  R  L  E 
                    Query_6601   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCACTAGAAACTATTGGAGCTGGATCCGGCAGCCCCCAGGTGAGAGACTGGAG  90
V  92.2% (224/243)  IGHV4-59*08  49   ...................C...........G........G...TT....C..........................GA..G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_6601   91   TGGATTGCATATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  92.2% (224/243)  IGHV4-59*08  139  .......GG......T...........AG...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  F  L  P  A  V  Q  Q  W  L 
                    Query_6601   181  CAGTTCTCCCTGAAGATGACTTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGATTCCTCCCCGCGGTGCAACAGTGGCTG  270
V  92.2% (224/243)  IGHV4-59*08  229  ...............C...GC........................G.................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-19*01  9    ---------------------------------------------------------------------------------.........  17

                                      ----------------------->                                  
                                       P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6601   271  CCAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  328
J  100.0% (51/51)   IGHJ2*01     3    -------...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_242543

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           318     6e-89
IGHD3-3*01                                                                                            18.0    0.61 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CGCGGCCTGCCACATATGAGTCTGATGGAAGTGCTA	ATTACGATT	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCGCGGCCTGCCACATATGAGTCTGATGGAAGTGCTAATTACGATTCTGACTAC	AKARPATYESDGSANYDSDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	25	4	0	86.2
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  F  T  F  R  S  Y  A  L  T  W  V  R  Q  P  P  G  K  G  L  
                    Query_6602   1    GGTCCCTGAGACTCTCCTGTGAAGGCAGTGGATTCACCTTTAGAAGCTATGCCTTGACCTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-23*01  47   .....................C..C.TC...............C.........A...G.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  G  G  S  G  N  N  T  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  S  
                    Query_6602   91   AGTGGGTCTCAAGTATTGGTGGTAGTGGCAATAATACATACTATGCAGACTCCGTGGAGGGCCGTTTCACCATCTCCAGAGACAATTCCA  180
V  90.8% (226/249)  IGHV3-23*01  137  ...........GC....A..........TGG..GC........C............A.......G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  H  L  Q  M  N  N  L  R  V  E  D  T  A  V  Y  Y  C  A  K  A  R  P  A  T  Y  E  
                    Query_6602   181  AGAACACGCTGCATCTCCAAATGAACAACCTGAGAGTCGAGGACACGGCCGTATATTACTGTGCGAAAGCGCGGCCTGCCACATATGAGT  270
V  90.8% (226/249)  IGHV3-23*01  227  ...........T....G..........G........C................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      R3-IMGT------------------------>                                  
                                      S  D  G  S  A  N  Y  D  S  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_6602   271  CTGATGGAAGTGCTAATTACGATTCTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  336
D  100.0% (9/9)     IGHD3-3*01   3    ---------------.........------------------------------------------  11
J  97.6% (40/41)    IGHJ4*02     8    -------------------------...................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_242541

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGCCGAAATC	GTATTACGACTTTTGGA	ATCCTTATTCTCGGCTCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCGAAATCGTATTACGACTTTTGGAATCCTTATTCTCGGCTCCTTCGACCCC	ARGGRNRITTFGILILGSFDP	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  H  Y  W  S  W  I  R  Q  S  P  R  K  G  L  E 
                    Query_6603   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGATCATTATTGGAGCTGGATCCGCCAGTCTCCAAGGAAGGGGCTGGAA  90
V  92.2% (226/245)  IGHV4-34*01  49   ...........................................G.T.C..C..................C.C...G.............G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_6603   91   TGGATTGGGGAGATCAACCATAGTGGAAGCACCAACTACAACCCGTCTCTCAAGAGTCGGGTCACCATATCAGCGGACACGTCTAAGAAC  180
V  92.2% (226/245)  IGHV4-34*01  139  ...........A.....T.............................C...........A.............TA........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  K  L  I  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  G  R  N  R  I  T  T  F 
                    Query_6603   181  CAGTTCTCCCTGAAGCTGATCTCTGTGACCGCCGCAGACACGGCTGTATATTTCTGTGCGAGAGGGGGCCGAAATCGTATTACGACTTTT  270
V  92.2% (226/245)  IGHV4-34*01  229  ...................G...............G...........G....A............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  94.1% (16/17)    IGHD3-3*01   1    ----------------------------------------------------------------------------.........T....  14

                                      MGT-------------------------->                                  
                                       G  I  L  I  L  G  S  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_6603   271  GGAATCCTTATTCTCGGCTCCTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  334
D  94.1% (16/17)    IGHD3-3*01   15   ...-------------------------------------------------------------  17
J  97.7% (42/43)    IGHJ5*02     9    ---------------------.........................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_242546

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           330     1e-92
IGHD2-15*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CTTCTGGTT	TTGTAGTGGTGCTAACTGCTACTC	GGACG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCTTCTGGTTTTGTAGTGGTGCTAACTGCTACTCGGACGACTTTGACTAC	AFWFCSGANCYSDDFDY	239	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	25	10	9	1	0	90
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	20	4	0	83.3
FR3-IMGT	125	238	114	114	0	0	100
CDR3-IMGT (germline)	239	240	2	2	0	0	100
Total	N/A	N/A	225	218	7	0	96.9


Alignments

                                      <FR1-IMGT><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><----
                                        G  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  S  S
                    Query_6604   16   TGGAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATACAGTAG  105
V  96.9% (218/225)  IGHV3-21*01  66   ..C........................C.......................................................C..T...  155
                                        A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S

                                      ---CDR2-IMGT------><----------------------------------------------------FR3-IMGT----------
                                        S  S  S  R  S  V  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q
                    Query_6604   106  TAGTAGTAGTCGTTCCGTATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCA  195
V  96.9% (218/225)  IGHV3-21*01  156  ..........A...A.A.........................................................................  245
                                        S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q

                                      ------------------------------------------><--------------------CDR3-IMGT-----------------
                                        M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  F  W  F  C  S  G  A  N  C  Y  S  D  D  F  D
                    Query_6604   196  AATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCCTTCTGGTTTTGTAGTGGTGCTAACTGCTACTCGGACGACTTTGA  285
V  96.9% (218/225)  IGHV3-21*01  246  .............................................---------------------------------------------  290
                                        M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                             
D  91.7% (22/24)    IGHD2-15*01  7    ------------------------------------------------------...........G..G.........------------  30
J  100.0% (45/45)   IGHJ4*02     4    -----------------------------------------------------------------------------------.......  10

                                      --->                                  
                                        Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6604   286  CTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  323
J  100.0% (45/45)   IGHJ4*02     11   ......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_242547

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           375     3e-106
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6605   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.0% (245/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_6605   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.0% (245/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_6605   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACAGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.0% (245/250)  IGHV4-31*03  229  ...............................................G......................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6605   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_242545

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD2-15*01                                                                                           21.8    0.041
IGHJ3*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGG	GGATATAGTAGTGG	CTGCTGCCACCGTTC	TTGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGGGATATAGTAGTGGCTGCTGCCACCGTTCTTGCTGTC	ARDQGDIVVAAATVLAV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  G  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_6606   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTGGTTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ......................................C...A...A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  F  Y  S  E  S  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  A  S  K  K 
                    Query_6606   91   TGGATTGGGCATATCTTTTACAGTGAGAGTACCAGCTATAACCCCTCCCTCAAGAGTCGAGTCACTATATCAGTAGACGCGTCCAAGAAG  180
V  93.5% (229/245)  IGHV4-59*01  139  .........T......A........G...C....A...C..........................C............A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  G  D  I  V  V  A  A 
                    Query_6606   181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATCAGGGGGATATAGTAGTGGCTGCT  270
V  93.5% (229/245)  IGHV4-59*01  229  ...................GC..........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD2-15*01  2    -----------------------------------------------------------------------......T.......-----  15

                                      ----------------->                                  
                                       A  T  V  L  A  V  W  G  Q  G  T  K  V  T  V  S  S  
                    Query_6606   271  GCCACCGTTCTTGCTGTCTGGGGCCAAGGGACAAAGGTCACCGTCTCTTCAG  322
J  95.2% (40/42)    IGHJ3*01     9    ----------...A....................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_247989

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           329     3e-92
IGHD3-10*01                                                                                           14.1    9.0  
IGHJ6*02                                                                                              112     6e-29


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGCCGC	CTATGGT	CCGAAGACGTTGGCC	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGCCGCCTATGGTCCGAAGACGTTGGCCTTACTACTACTCCTACGGTATGGACGTC	ARDGPPMVRRRWPYYYSYGMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6607   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-30*03  47   ....................................C........G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  A  A  I  S  Y  D  G  T  N  K  Q  Y  A  D  S  V  K  G  R  I  T  I  S  R  D  N  S  
                    Query_6607   91   CCTGGGTGGCAGCCATATCATATGATGGGACTAACAAACAGTATGCAGATTCCGTGAAGGGCCGAATCACCATCTCCAGAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-30*03  137  AG..........TT..............A.G...T...T.C........C...............T........................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  V  N  S  L  R  T  D  D  T  A  V  Y  Y  C  A  R  D  G  P  P  M  V  R  
                    Query_6607   181  AAAACACGTTGTACCTGCAAGTAAACAGCCTGAGAACTGACGACACGGCTGTGTATTACTGTGCGAGAGATGGGCCGCCTATGGTCCGAA  270
V  92.0% (230/250)  IGHV3-30*03  227  .G......C....T......A.G............G....G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-10*01  7    ------------------------------------------------------------------------------.......-----  13

                                      -CDR3-IMGT--------------------------->                                 
                                      R  R  W  P  Y  Y  Y  S  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6607   271  GACGTTGGCCTTACTACTACTCCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
J  98.4% (60/61)    IGHJ6*02     2    ----------...........A.................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_242548

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            302     3e-84
IGHD2-21*01                                                                                           10.3    113  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCG	ATTCC	GTGCCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGATTCCGTGCCCCCTAC	ARRFRAPY	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	20	7	0	74.1
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	16	5	0	76.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	220	27	0	89.1


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  G  V  S  D  G  S  I  D  S  S  G  W  W  I  W  V  R  Q  P  P  G  K  G  
                    Query_6608   1    GGTCCCTGAGACTCTCCTGCGGTGTCTCTGATGGCTCCATCGACTCTAGTGGCTGGTGGATTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  89.1% (220/247)  IGHV4-4*02   47   ..A.....TCC...A......C........G..........AG.AG....AA........G.............................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  T  H  H  T  G  T  T  N  Y  N  S  S  L  Q  S  R  V  T  I  S  L  D  K  S  
                    Query_6608   91   TGGAGTGGATTGGGGAAACCCATCACACTGGGACCACCAACTACAACTCGTCCCTCCAGAGTCGAGTCACCATATCACTAGACAAGTCCA  180
V  89.1% (220/247)  IGHV4-4*02   137  ..................T.T....T.G.....G.............C........A....................G............  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  F  R  A  P  Y  W  
                    Query_6608   181  AGAATCAGTTCTCCCTAAACCTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGCGAGGCGATTCCGTGCCCCCTACTGGG  270
V  89.1% (220/247)  IGHV4-4*02   227  ....C...........G..G....G.................................C........-----------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  24   ----------------------------------------------------------------------.....---------------  28
J  97.2% (35/36)    IGHJ4*02     11   ----------------------------------------------------------------------------------........  18

                                                                  
                                      G  Q  G  I  L  V  T  V  S  S
                    Query_6608   271  GCCAGGGAATCCTGGTCACCGTCTCCTC  298
J  97.2% (35/36)    IGHJ4*02     19   .........C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_242549

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD2-2*01                                                                                            14.1    8.6   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCACCA	CTATGCC	TATGCCGGCGGGGGATATG	TTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACCACTATGCCTATGCCGGCGGGGGATATGTTGAATCC	ARGHHYAYAGGGYVES	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  T  W  I  R  Q  H  P  G  K  A 
                    Query_6609   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGCC  90
V  96.8% (242/250)  IGHV4-31*03  49   .............................................................G..........................G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       P  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  T  S 
                    Query_6609   91   CCGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCAGTAGACACGTCT  180
V  96.8% (242/250)  IGHV4-31*03  139  .T..................................................................T.C...................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  H  Y  A  Y  A 
                    Query_6609   181  AAAAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGGTCACCACTATGCCTATGCC  270
V  96.8% (242/250)  IGHV4-31*03  229  ..G.......................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD2-2*01   25   -----------------------------------------------------------------------------.......------  31

                                      GT------------------>                                  
                                       G  G  G  Y  V  E  S  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_6609   271  GGCGGGGGATATGTTGAATCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  325
J  92.9% (39/42)    IGHJ4*02     7    -------------....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_72767

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           266     2e-73
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	TTTTACCGTCT	GGATATTGTAGTG	TTGATCGGTGCGACT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATTTTACCGTCTGGATATTGTAGTGTTGATCGGTGCGACTACTAC	AILPSGYCSVDRCDYY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	95	19	0	83.3
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	208	38	0	84.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  S  N  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6610   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACATTTAGTAGTAATGGCATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  84.6% (208/246)  IGHV3-23*01  47   .....................C...............C.....C..CT...C.....G.....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  A  S  G  G  G  P  K  Y  V  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_6610   91   AGTGGGTCTCGAGCATCAGAGCTAGTGGCGGTGGGCCAAAATATGTCGACTCTGTGAAGGGCCGGTTCAGCATCTCCAGAGACAATTCCA  180
V  84.6% (208/246)  IGHV3-23*01  137  ..........AGCT..T..T.G......T...A.CA..T.C..C.CA.....C................C....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  F  L  H  M  N  S  P  R  V  E  D  T  A  I  Y  F  C  A  I  L  P  S  G  Y  C  S  
                    Query_6610   181  AGAACACCCTGTTTCTGCACATGAACAGCCCGCGCGTCGAGGACACGGCCATTTATTTTTGCGCGATTTTACCGTCTGGATATTGTAGTG  270
V  84.6% (208/246)  IGHV3-23*01  227  .......G....A......A..........T.A.A.C.............G.A....AC..T....------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (13/13)   IGHD2-15*01  2    -----------------------------------------------------------------------------.............  14

                                      T------------------>                                  
                                      V  D  R  C  D  Y  Y  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_6610   271  TTGATCGGTGCGACTACTACTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  324
J  94.9% (37/39)    IGHJ4*02     10   ---------------.................AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_112925

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD5-18*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGCCATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGCCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	114	0	0	100
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	235	7	0	97.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  R  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E  
                    Query_6611   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGGAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAAAGACTGGAGT  93
V  97.1% (235/242)  IGHV4-59*01  50   .....TCC...A............................T......................................GG.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_6611   94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  97.1% (235/242)  IGHV4-59*01  140  ..........................................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D  
                    Query_6611   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGCCATGGTTACGGAGGAGTTGACT  273
V  97.1% (235/242)  IGHV4-59*01  230  ..............................................................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  93.3% (14/15)    IGHD5-18*01  6    --------------------------------------------------------------......T........-------------  20
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------------------------------------------......  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6611   274  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (42/42)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_103737

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     3e-91
IGHD1-26*01                                                                                           12.2    33   
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGAAAGCAC	ATAGTG	ACCACTAAATGGATGGT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGAAAGCACATAGTGACCACTAAATGGATGGTTGATGCTTTTGATAAC	AKRKHIVTTKWMVDAFDN	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  A  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6612   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGCCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTAG  90
V  91.9% (228/248)  IGHV3-23*01  47   .........................................AG..............G..............................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  M  S  G  S  G  A  E  T  *  L  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6612   91   AGTGGGTCTCAGGTATGAGTGGTAGTGGTGCTGAAACATAACTCGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCCGAGACAATTCCA  180
V  91.9% (228/248)  IGHV3-23*01  137  ............C...T.............G.AGC.....CTA..................................A............  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  F  L  E  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  R  K  H  I  V  T  T  
                    Query_6612   181  AGAACACACTATTTCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATATTATTGTGCGAAAAGAAAGCACATAGTGACCACTA  270
V  91.9% (228/248)  IGHV3-23*01  227  .......G..G.A....C................................G.......C.........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-26*01  4    -----------------------------------------------------------------------------......-------  9

                                      IMGT--------------------->                                  
                                      K  W  M  V  D  A  F  D  N  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6612   271  AATGGATGGTTGATGCTTTTGATAACTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  330
J  98.0% (49/50)    IGHJ3*02     1    ----------..............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_39810

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           12.2    30   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGACGGGT	TGGCTG	CCC	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGACGGGTTGGCTGCCCGACGAC	ARGTGWLPDD	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  Y  C  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6613   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTACTACTGCAACTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  93.9% (229/244)  IGHV4-59*01  49   ...............................G..........A..........G.G..................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  N  T  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6613   91   TGGATTGGACATATCTACAACACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  93.9% (229/244)  IGHV4-59*01  139  ........GT.......TT...G.....G.............................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  T  G  W  L  P  D  D  W 
                    Query_6613   181  CAGTTCTCCTTGAACCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGACGGGTTGGCTGCCCGACGACTGG  270
V  93.9% (229/244)  IGHV4-59*01  229  .........C....G....G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  12   ------------------------------------------------------------------------......------------  17
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------...T.....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_6613   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.5% (39/40)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_39813

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           313     2e-87
IGHD4-17*01                                                                                           25.7    0.003
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGCGGCAC	TGACTACGTTGACTAC	GGGGAGGCCGCTCCACGGGAGGTG	GGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGACGGCGGCACTGACTACGTTGACTACGGGGAGGCCGCTCCACGGGAGGTGGGTCTGGACGTC	VRDGGTDYVDYGEAAPREVGLDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  G  Y  A  I  H  W  V  R  R  A  P  G  K  G  L  
                    Query_6614   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAATGGCTATGCCATACACTGGGTCCGCCGGGCTCCAGGCAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-33*01  47   ..........................................G.A......G...G.............A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  V  D  G  N  T  Q  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_6614   91   AGTGGGTGGCCATTATTTGGGTTGATGGAAATACTCAAAACTATGCTGACTCCGTGAAGGGCCGATTCACCGTTTCCAGAGACAATTCCA  180
V  90.0% (225/250)  IGHV3-33*01  137  ..........AG....A...TA........G..A.A..T.......A........................A.C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  V  Y  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  V  R  D  G  G  T  D  Y  V  
                    Query_6614   181  AGAACACAGTGTATTTGCAAATGAACAGCCTGACGGCCGAAGACACGGCTGTCTATTACTGTGTGAGAGACGGCGGCACTGACTACGTTG  270
V  90.0% (225/250)  IGHV3-33*01  227  .......GC.....C..................GA.....G...........G..........C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.8% (15/16)    IGHD4-17*01  1    -------------------------------------------------------------------------------........G..  11

                                      --CDR3-IMGT----------------------------->                                 
                                      D  Y  G  E  A  A  P  R  E  V  G  L  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_6614   271  ACTACGGGGAGGCCGCTCCACGGGAGGTGGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  344
D  93.8% (15/16)    IGHD4-17*01  12   .....---------------------------------------------------------------------  16
J  95.6% (43/45)    IGHJ6*02     18   -----------------------------...A..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_39812

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           324     8e-91
IGHD2-2*01                                                                                            21.8    0.042
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCGGAGGGTTT	TTGTAGCGGTACAAGCTGCT	CCG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCGGAGGGTTTTTGTAGCGGTACAAGCTGCTCCGACTTTGACTTC	ARSEGFCSGTSCSDFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6615   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGATTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (227/247)  IGHV3-48*03  47   ............................................AG............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  S  S  S  T  G  N  F  R  F  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_6615   91   AGTGGGTTTCATACAGTAGTAGTACTGGTAATTTTAGATTTTATGCCGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCG  180
V  91.9% (227/247)  IGHV3-48*03  137  ...............T........G.....G.ACC.T..AC..C..A........................A.................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  S  E  G  F  C  S  G  
                    Query_6615   181  AGAACTCTCTTTATCTACAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGGTCGGAGGGTTTTTGTAGCGGTA  270
V  91.9% (227/247)  IGHV3-48*03  227  .......A..G.....G...................C..............................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  85.0% (17/20)    IGHD2-2*01   7    -------------------------------------------------------------------------------......TA...  17

                                      GT-------------------->                                  
                                      T  S  C  S  D  F  D  F  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_6615   271  CAAGCTGCTCCGACTTTGACTTCTGGGGCCAGGGAACCCTGGTCAGCGTCTCCTCAG  327
D  85.0% (17/20)    IGHD2-2*01   18   .C.......------------------------------------------------  26
J  95.6% (43/45)    IGHJ4*02     4    ------------.........A.......................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_39815

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_6616   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_6616   91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_6616   181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_6616   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_39814

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           367     5e-104
IGHD3-3*01                                                                                            39.1    2e-07 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	T	TTACGATTTTTTGAGTGGTTATT	N/A	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATTTACGATTTTTTGAGTGGTTATTACTTC	AIYDFLSGYYF	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	238	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6617   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (238/241)  IGHV4-34*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6617   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTGAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (238/241)  IGHV4-34*01  139  ..................................................C.......................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  I  Y  D  F  L  S  G  Y  Y  F 
                    Query_6617   181  CAGTTCTCCCTGAAACTGAGCTCTCTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGATTTACGATTTTTTGAGTGGTTATTACTTC  270
V  98.8% (238/241)  IGHV4-34*01  229  ..............G.........G....................................-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.7% (22/23)    IGHD3-3*01   4    --------------------------------------------------------------...........G...........-----  26
J  97.4% (38/39)    IGHJ4*02     10   -------------------------------------------------------------------------------------...A.  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6617   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  97.4% (38/39)    IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_103731

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_6618   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_6618   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_6618   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_6618   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_39816

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           305     3e-85
IGHD2-21*02                                                                                           19.9    0.15 
IGHJ5*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGGCCGGTGTGTCGA	TGGTGACTGC	CACGGATA	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGCCGGTGTGTCGATGGTGACTGCCACGGATACGACCGC	AKGRCVDGDCHGYDR	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	221	26	0	89.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  T  G  F  D  F  I  Y  S  V  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6619   1    GGTCCCTGAGACTCTCCTGTGCAGCCACTGGATTCGACTTTATCTACTCTGTCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.5% (221/247)  IGHV3-23*01  47   ..........................T........AC.....G.AG..A..C......C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  G  S  G  R  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  G  N  S  
                    Query_6619   91   AGTGGGTCTCATATATCAGTGGTAGTGGTCGTAATACATATTACGCAGACTCCGTGAAGGGCCGGTTCACCATTTCCAGAGGCAATTCGA  180
V  89.5% (221/247)  IGHV3-23*01  137  ...........GC...T............G...GC.....C................................C.......A......C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      N  D  T  L  Y  P  Q  M  N  S  L  R  V  D  D  T  A  L  Y  Y  C  A  K  G  R  C  V  D  G  D  
                    Query_6619   181  ACGACACGCTGTATCCGCAGATGAACAGCCTGAGAGTCGATGACACGGCCCTATATTACTGTGCGAAGGGCCGGTGTGTCGATGGTGACT  270
V  89.5% (221/247)  IGHV3-23*01  227  .GA............T...A................C...G.........G................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD2-21*02  13   ----------------------------------------------------------------------------------........  20

                                      ---------------->                                  
                                      C  H  G  Y  D  R  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_6619   271  GCCACGGATACGACCGCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD2-21*02  21   ..-------------------------------------------------  22
J  95.1% (39/41)    IGHJ5*02     11   ----------.....C.......................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_39819

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6620   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6620   91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*01  139  ........GT........T.......G...............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_6620   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.5% (234/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6620   271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_39818

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           353     9e-100
IGHD6-19*01                                                                                           18.0    0.59  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGCAGGA	AGTGGCTGG	CCCCGGGGTCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGCAGGAAGTGGCTGGCCCCGGGGTCATTTTGACTAC	ARVAGSGWPRGHFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_6621   1    ACCCTGTCCCTCACCTGCACTGTCTCCGGTGGATCCGTCAGCAGTAGTAGTTACTATTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGA  90
V  95.2% (238/250)  IGHV4-61*01  49   ..........................T.....C............G..........C.......................A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  E  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S 
                    Query_6621   91   CTGGAGTGGATTGAGTATATCTATTACAGGGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCGTATCAGTCGACACGTCC  180
V  95.2% (238/250)  IGHV4-61*01  139  .............G...............T....G.....................................A.......A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  A  G  S  G  W  P 
                    Query_6621   181  AAGAACCAGTTCTCCCTGAAACTGAGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTAGCAGGAAGTGGCTGGCCC  270
V  95.2% (238/250)  IGHV4-61*01  229  ....................G.....C...........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD6-19*01  10   ------------------------------------------------------------------------------.........---  18

                                      ----------------->                                
                                       R  G  H  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S
                    Query_6621   271  CGGGGTCATTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTC  320
J  97.6% (40/41)    IGHJ4*02     6    ---------......................C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_84398

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           346     2e-97
IGHD3-22*01                                                                                           18.0    0.61 
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCTAC	GCGTCGGCTACCG	TGATAGTCGTGG	GGAA	GATGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGCTACGCGTCGGCTACCGTGATAGTCGTGGGGAAGATGTTTTTGATATA	ARLRVGYRDSRGEDVFDI	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	23	4	0	85.2
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	253	10	9	1	0	90
Total	N/A	N/A	253	237	16	0	93.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  F  S  G  F  S  V  S  S  S  G  M  S  L  S  W  I  R  Q  P  P  G  K  A 
                    Query_6622   1    ACCCTGTCCCTCACCTGCACCTTCTCTGGGTTCTCGGTCAGCAGTAGTGGGATGTCTCTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCC  90
V  93.7% (237/253)  IGHV2-70*01  49   .....CA.A..G.......................AC......C......A....G.G................................  138
                                       T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R  Q  P  P  G  K  A 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T  I  S  K  D  T  S 
                    Query_6622   91   CTGGAGTGGCTTGCACTCATTGATTGGGATGATGATAAGTACTACAGCACATCTCTGAAGACCAGACTCACTATCTCCAAGGACACCTCC  180
V  93.7% (237/253)  IGHV2-70*01  139  ......................................A..........................G.....C..................  228
                                       L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T  I  S  K  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  N  Q  V  V  L  K  M  T  N  M  D  P  V  D  T  A  K  Y  Y  C  A  R  L  R  V  G  Y  R  D 
                    Query_6622   181  AAAAACCAGGTGGTCCTTAAAATGACCAACATGGACCCTGTGGACACAGCCAAGTATTACTGTGCACGGCTACGCGTCGGCTACCGTGAT  270
V  93.7% (237/253)  IGHV2-70*01  229  ...................C................................C................A...-----------------  301
                                       K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  I                   
D  91.7% (11/12)    IGHD3-22*01  10   --------------------------------------------------------------------------------------....  13

                                      -IMGT--------------------->                                  
                                       S  R  G  E  D  V  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6622   271  AGTCGTGGGGAAGATGTTTTTGATATATGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  331
D  91.7% (11/12)    IGHD3-22*01  14   ...A....-----------------------------------------------------  21
J  95.9% (47/49)    IGHJ3*02     2    ------------....C.........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_103739

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD5-18*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTCCGACCC	CTATGGTTAC	GAGTCCCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACTCCGACCCCTATGGTTACGAGTCCCTCTTTGACTAC	AKDSDPYGYESLFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6623   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTATGCCCTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   .............................................G.......A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  G  G  A  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6623   91   AGTGGGTCTCAACTATTAGTGGTAGTGGTGGTGCCACGTACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCC  180
V  94.0% (235/250)  IGHV3-23*01  137  ...........G....................AG...A...................................................A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  D  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  K  D  S  D  P  Y  G  Y  
                    Query_6623   181  GGGACTCGTTGTTTCTACAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTATATTTCTGTGCGAAAGACTCCGACCCCTATGGTTACG  270
V  94.0% (235/250)  IGHV3-23*01  227  A.A..A..C...A...G...................C....................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD5-18*01  11   -------------------------------------------------------------------------------..........-  20

                                      ---------------->                                  
                                      E  S  L  F  D  Y  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_6623   271  AGTCCCTCTTTGACTACTGGGGCCAGGGAACCCTGGCCACCGTCTCCTCAG  321
J  97.7% (43/44)    IGHJ4*02     5    -------.............................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_103738

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           347     7e-98
IGHD3-10*01                                                                                           33.4    1e-05
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGGTCACCG	CTATGGTTCGGGGAGTT	GGGG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGGTCACCGCTATGGTTCGGGGAGTTGGGGCTACGGTATGGACGTC	ARSGHRYGSGSWGYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         F  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6624   1    GGTTCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-33*01  47   ...C..........................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  H  D  G  S  N  E  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  E  N  S  
                    Query_6624   91   AGTGGGTGGCAGTTATATGGCATGATGGAAGTAATGAACACTATGCAGACTCCGTGAAGGGTCGATTCACCATCTCCAGAGAGAATTCGA  180
V  94.8% (235/248)  IGHV3-33*01  137  ....................T..............A..T......................C....................C.....C.  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  V  Y  V  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  G  H  R  Y  G  S  
                    Query_6624   181  AGAACACGGTATATGTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGATCGGGTCACCGCTATGGTTCGG  270
V  94.8% (235/248)  IGHV3-33*01  227  ........C.G...C....A................................G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (17/17)   IGHD3-10*01  7    -------------------------------------------------------------------------------...........  17

                                      IMGT--------------------->                                 
                                      G  S  W  G  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6624   271  GGAGTTGGGGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (17/17)   IGHD3-10*01  18   ......-----------------------------------------------------  23
J  100.0% (49/49)   IGHJ6*02     14   ----------.................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_147742

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_6625   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AGT.A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S 
                    Query_6625   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T.A....A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_6625   181  CAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ..............G.....C..................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6625   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_72764

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         375     3e-106
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GCCTTCGGG	ACTATGTTTCGGGGAATTA	CT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGCCTTCGGGACTATGTTTCGGGGAATTACTACAACTGGTTCGACCCC	ARGLRDYVSGNYYNWFDP	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_6626     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  98.0% (245/250)  IGHV4-30-4*01  49   ..................A..............................A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  F  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_6626     91   CTGGAGTGGATTGGGTTCATCTATTACAGTGGAAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  98.0% (245/250)  IGHV4-30-4*01  139  ................A...............G.........................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R  G  L  R  D  Y  V  S 
                    Query_6626     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTGCTGTGCCAGAGGCCTTCGGGACTATGTTTCG  270
V  98.0% (245/250)  IGHV4-30-4*01  229  ..........................................................A...........--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.5% (17/19)    IGHD3-10*01    6    -------------------------------------------------------------------------------......G....  16

                                        -IMGT--------------------->                                  
                                         G  N  Y  Y  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6626     271  GGGAATTACTACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  89.5% (17/19)    IGHD3-10*01    17   ....G...-----------------------------------------------------  24
J  100.0% (51/51)   IGHJ5*02       1    ----------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_330048

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD2-15*01                                                                                           12.2    31   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CCTAAGGATTG	GGTGGT	TCCTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACCTAAGGATTGGGTGGTTCCTTACTACTTTGACCAC	ARPKDWVVPYYFDH	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  N  T  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6627   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTCAATACTTACTACTGGACCTGGATCCGACAGCCCCCAGGGAAGGGACTGGAG  90
V  91.8% (223/243)  IGHV4-59*01  49   ....................................A...G..G...........G.........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  A  S  K  N 
                    Query_6627   91   TGGATTGGCTATGTCTATTCCAGTGGGAGCACTAACTACAACCCCTCCCTCAAGAGCCGAGTCACCATATCACTGGACGCGTCCAAGAAC  180
V  91.8% (223/243)  IGHV4-59*01  139  ........G...A......A............C.......................T...............G.A...A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  F  C  A  R  P  K  D  W  V  V  P  Y  Y 
                    Query_6627   181  CAGTTCTCCCTGAAACTGACCTCTGTGACCGCTGCCGACACGGCCCTCTATTTCTGTGCGCGACCTAAGGATTGGGTGGTTCCTTACTAC  270
V  91.8% (223/243)  IGHV4-59*01  229  ..............G....G...............G.........G.G....A.......A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-15*01  14   --------------------------------------------------------------------------......----------  19
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6627   271  TTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    ......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_308903

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            327     9e-92
IGHD3-10*01                                                                                           12.2    31   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TTAAGGGAAGTA	GTTCGTCGACTTATT	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTAAGGGAAGTAGTTCGTCGACTTATTACTGGTTCGACCCC	VKGSSSSTYYWFDP	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	241	1	1	0	0	100
Total	N/A	N/A	241	225	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  L  V  S  G  G  S  I  T  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_6628   1    ACCCTGTCCCTCACCTGCCTTGTCTCTGGTGGGTCCATTACCAGTAGTAACTGGTGGTCTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.4% (225/241)  IGHV4-4*02   49   ..................GC............C.....C.G................AG...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  A  D  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  K 
                    Query_6628   91   GAGTGGATTGCGGATATCTATTATAGTGGGAGCACCAATTACAACCCGTCCCTGAAGAGTCGAGTCACCATCTCATTAGACAAGTCCAAG  180
V  93.4% (225/241)  IGHV4-4*02   139  ..........G...A......C................C..............C.................A...G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  K  G  S  S  S  S  T  Y  Y 
                    Query_6628   181  AACCAGTTCTCCCTGAAACTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGTTAAGGGAAGTAGTTCGTCGACTTATTAC  270
V  93.4% (225/241)  IGHV4-4*02   229  .................G......................................C....-----------------------------  289
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  80.0% (12/15)    IGHD3-10*01  12   -------------------------------------------------------------------------.....GG..G.....--  26
J  95.8% (46/48)    IGHJ5*02     4    ----------------------------------------------------------------------------------------..  5

                                      ----------->                                  
                                       W  F  D  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6628   271  TGGTTCGACCCCTGGGGCCGGGGAACCCTGGTCACTGTCTCCTCAG  316
J  95.8% (46/48)    IGHJ5*02     6    ...................A...............C..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_107929

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           288     4e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACTTTGACTTC	ARVSTSAYYFDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	214	30	0	87.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_6629   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGACAACCCCCAGGAAAGGGACTGGAG  90
V  87.7% (214/244)  IGHV4-59*01  49   .................................T........A.....T.C.........A....G..G........G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  S  F  D  T  S  K  R 
                    Query_6629   91   TGGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGTCCTTTGACACGTCCAAGAGG  180
V  87.7% (214/244)  IGHV4-59*01  139  .......GGT....C...........G.G..C...C................A..G............A..AG.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  Y  Y  F  D 
                    Query_6629   181  CAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATACTACTTTGAC  270
V  87.7% (214/244)  IGHV4-59*01  229  .............A....AGC..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-2*01   17   ---------------------------------------------------------------------......---------------  22
J  91.3% (42/46)    IGHJ4*02     1    -------------------------------------------------------------------------------...........  11

                                      -->                                
                                       F  W  G  R  G  T  L  V  V  V  S  S
                    Query_6629   271  TTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  305
J  91.3% (42/46)    IGHJ4*02     12   .A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_107926

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           366     2e-103
IGHD1-1*01                                                                                            12.2    32    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTAC	AEEKRRVPRGTFHY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6630   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-23*01  47   ................................T.........G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  
                    Query_6630   91   AGTGGGTCTCAGCCATTAGTGGTGGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGA  180
V  96.8% (242/250)  IGHV3-23*01  137  .............T.........A......................................................G.........C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  
                    Query_6630   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGG  270
V  96.8% (242/250)  IGHV3-23*01  227  .................................................................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------------------------......------------  17

                                      ------------->                                  
                                      G  T  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6630   271  GAACCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (43/44)    IGHJ4*02     5    ----....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_107927

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         336     1e-94
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGAGGGAGCC	TATAGCAGTGTCTG	CATCCCTTATAACTCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGAGGGAGCCTATAGCAGTGTCTGCATCCCTTATAACTCCGCTTGACTAC	ARVREPIAVSASLITPLDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  S  F  S  H  Y  A  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_6631     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCCTTCAGTCACTATGCTATGCATTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-30-3*01  47   ...................................A........AG............C............G..................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  D  D  G  T  N  K  H  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6631     91   AGTGGGTGGCAGTTATATCAGATGATGGCACCAATAAACATTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-30-3*01  137  ....................T.......A.G.......T.C.A...............................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                        K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  A  Y  Y  C  A  R  V  R  E  P  I  A  V  
                    Query_6631     181  AGAACACGTTGTTTCTGCAAATGAATAGCCTGAGAGCTGAGGACACGGCTGCATATTACTGTGCGAGGGTGAGGGAGCCTATAGCAGTGT  270
V  93.5% (231/247)  IGHV3-30-3*01  227  ........C...A............C.........................TG..............-----------------------  293
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD6-19*01    4    -------------------------------------------------------------------------------..........G  14

                                        -IMGT----------------------->                                  
                                        S  A  S  L  I  T  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6631     271  CTGCATCCCTTATAACTCCGCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  92.9% (13/14)    IGHD6-19*01    15   ...------------------------------------------------------------  17
J  100.0% (42/42)   IGHJ4*02       7    ---------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_349793

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           391     5e-111
IGHD3-10*01                                                                                           46.8    1e-09 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGCTTCAGAC	TACTATGGTTCGGGGAGTTATTAT	N/A	TACAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGCTTCAGACTACTATGGTTCGGGGAGTTATTATTACATTGACTAC	ARVASDYYGSGSYYYIDY	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	250	0	0	100


Alignments

                                       <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                        T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                     Query_6632   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  100.0% (250/250)  IGHV4-61*01  49   ..........................................................................................  138
                                        T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                       -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                     Query_6632   91   CTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  100.0% (250/250)  IGHV4-61*01  139  ..........................................................................................  228
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                       --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  A  S  D  Y  Y  G 
                     Query_6632   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTTGCTTCAGACTACTATGGT  270
V  100.0% (250/250)  IGHV4-61*01  229  ......................................................................--------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (24/24)    IGHD3-10*01  5    ---------------------------------------------------------------------------------.........  13

                                       -IMGT--------------------->                                  
                                        S  G  S  Y  Y  Y  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_6632   271  TCGGGGAGTTATTATTACATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  100.0% (24/24)    IGHD3-10*01  14   ...............----------------------------------------------  28
J  97.8% (45/46)     IGHJ4*02     3    ---------------...T..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_107925

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           392     2e-111
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GGGACT	AGGATATTGTCGTGGTACC	GACTGCAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGGACTAGGATATTGTCGTGGTACCGACTGCACCTACTACGGTTTGGACGTC	ARGLGYCRGTDCTYYGLDV	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	74	1	0	98.7
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	106	8	0	93
CDR3-IMGT (germline)	292	296	5	4	1	0	80
Total	N/A	N/A	293	272	21	0	92.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  S  F  S 
                    Query_6633   4    CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCAGTTTCAGC  93
V  92.8% (272/293)  IGHV1-69*12  1    ...........G......................................................................CC......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  D  A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  L  I  P  I  F  G  I  L  N  Y 
                    Query_6633   94   GACGATGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCCTCATCCCTATCTTTGGTATATTAAACTAC  183
V  92.8% (272/293)  IGHV1-69*12  91   AG.T.........G.............................................GA..................C.GC.......  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  S  V  D  E  S  T  S  T  T  Y  M  E  L  S  S  L  G  S  D  D 
                    Query_6633   184  GCACAGAAATTCCAGGGCAGAGTCACGATTTCCGTGGACGAGTCCACGAGCACAACCTACATGGAGCTGAGCAGCCTGGGATCTGACGAC  273
V  92.8% (272/293)  IGHV1-69*12  181  ........G.....................A...C......A............G.......................A.......G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  V  Y  F  C  A  R  G  L  G  Y  C  R  G  T  D  C  T  Y  Y  G  L  D  V  W  G  Q  G  A 
                    Query_6633   274  ACGGCCGTGTATTTCTGTGCAAGGGGACTAGGATATTGTCGTGGTACCGACTGCACCTACTACGGTTTGGACGTCTGGGGCCAGGGGGCC  363
V  92.8% (272/293)  IGHV1-69*12  271  .............A......G..-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  89.5% (17/19)    IGHD2-2*01   1    -----------------------------..........A..A.....------------------------------------------  19
J  92.3% (48/52)    IGHJ6*02     11   --------------------------------------------------------..........A................A...A..  44

                                                        
                                       T  V  I  V  S  S 
                    Query_6633   364  ACGGTCATCGTCTCCTCA  381
J  92.3% (48/52)    IGHJ6*02     45   .......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_349795

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         283     1e-78
IGHD2-15*01                                                                                           19.9    0.17 
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GGAGAGGGCTGTCGCGCTT	TTGTAGTGCTGGT	TCCTGCGAACTCTC	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGGGAGAGGGCTGTCGCGCTTTTGTAGTGCTGGTTCCTGCGAACTCTCCGGTATGGACGTC	ATGRGLSRFCSAGSCELSGMDV	246	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	98	16	0	86
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	249	215	34	0	86.3


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  V  V  S  G  G  S  I  T  S  G  A  S  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_6634     4    CCCTGAGACTCTCCTGTGTTGTCTCTGGTGGCTCCATTACCAGTGGGGCTTCCTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  86.3% (215/249)  IGHV4-30-4*01  50   .....TCC...A....CAC..................C.G......T.A..A......................................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  N  I  H  H  S  G  N  T  Y  Y  N  P  S  L  N  S  R  I  T  I  S  I  D  R  S  
                    Query_6634     94   TGGAGTGGATTGGGAACATCCATCACAGCGGGAACACCTACTACAACCCGTCCCTCAACAGTCGGATTACCATATCCATAGATAGGTCCA  183
V  86.3% (215/249)  IGHV4-30-4*01  140  ..............T.....T..T....T....G........................G.....AG..........AG....C.C.....  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><---------------------------
                                        K  N  Q  V  S  L  N  L  N  S  A  T  V  A  D  T  A  V  Y  Y  C  A  T  G  R  G  L  S  R  F  
                    Query_6634     184  AAAACCAGGTCTCCCTGAACCTGAACTCTGCAACAGTCGCGGACACGGCCGTGTATTACTGTGCCACAGGGAGAGGGCTGTCGCGCTTTT  273
V  86.3% (215/249)  IGHV4-30-4*01  230  .G......T..........G....G.....TG..T.C...A.........................G..---------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD2-15*01    7    ----------------------------------------------------------------------------------------..  8

                                        -CDR3-IMGT--------------------------->                                 
                                        C  S  A  G  S  C  E  L  S  G  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_6634     274  GTAGTGCTGGTTCCTGCGAACTCTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  344
D  92.3% (12/13)    IGHD2-15*01    9    ......G....------------------------------------------------------------  19
J  97.8% (45/46)    IGHJ6*02       17   -------------------------..................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_107923

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           346     2e-97
IGHD2-15*01                                                                                           33.4    2e-05
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATGAAA	GATATTGTAGTGAAGGTAGTTGCTAC	CCTACA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTACCCTACATACTTTGACTTC	ARYERYCSEGSCYPTYFDF	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	255	34	0	88.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  K  I  S  C  K  T  S  G  Y  S  F  S  N  Y
                    Query_6635   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAAAAGCCCGGGCAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGTTTCAGCAACTA  90
V  88.2% (255/289)  IGHV5-51*01  6    .....................A..................G.......................GG............C..T.C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  S  G  E  G  L  E  W  M  G  I  I  Y  A  G  D  S  D  I  T  Y  S  P
                    Query_6635   91   TTGGATCGGCTGGGTGCGCCAGATGTCCGGTGAAGGCCTGGAGTGGATGGGAATCATCTATGCTGGCGACTCTGACATTACATATAGTCC  180
V  88.2% (255/289)  IGHV5-51*01  96   C........................C....GA...................G.........C....T........T.CC.G...C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  R  V  T  I  S  V  D  K  A  I  D  T  A  Y  V  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6635   181  GTCCTTTGAGGGCCGGGTCACCATCTCAGTCGACAAGGCCATCGACACCGCCTACGTACAGTGGAGCAGTCTGAAGGCCTCGGACACCGC  270
V  88.2% (255/289)  IGHV5-51*01  186  ......CC.A....A..............C.......T.....AG..........C.G...........C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        T  Y  Y  C  A  R  Y  E  R  Y  C  S  E  G  S  C  Y  P  T  Y  F  D  F  W  G  Q  G  T  P  V
                    Query_6635   271  CACATATTACTGTGCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTACCCTACATACTTTGACTTCTGGGGCCAGGGAACCCCGGT  360
V  88.2% (255/289)  IGHV5-51*01  276  ..TG...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  88.5% (23/26)    IGHD2-15*01  3    --------------------------............GT.....C......--------------------------------------  28
J  95.7% (44/46)    IGHJ4*02     3    ----------------------------------------------------------..........A.................T...  34

                                                    
                                        T  V  S  S  
                    Query_6635   361  CACCGTCTCCTCAG  374
J  95.7% (44/46)    IGHJ4*02     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_107920

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-10*01                                                                                           21.8    0.040
IGHJ2*01                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCAAATCGCCCC	ATTACTATGGT	G	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGATCCAAATCGCCCCATTACTATGGTGGGTACTTCGATCTC	SRSKSPHYYGGYFDL	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6636   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATGGTTTCTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (232/243)  IGHV4-59*01  49   ........................................G.A...A.........C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6636   91   TGGATTGCGTATATCTATCACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (232/243)  IGHV4-59*01  139  .......G..........T.......................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  S  R  S  K  S  P  H  Y  Y  G  G 
                    Query_6636   181  CAGTTTTCCCTGAAACTGACCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTTCGAGATCCAAATCGCCCCATTACTATGGTGGG  270
V  95.5% (232/243)  IGHV4-59*01  229  .....C........G....G...........................G.........G.....---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (11/11)   IGHD3-10*01  3    ----------------------------------------------------------------------------...........---  13
J  100.0% (48/48)   IGHJ2*01     6    ----------------------------------------------------------------------------------------..  7

                                      ----------->                                  
                                       Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6636   271  TACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  316
J  100.0% (48/48)   IGHJ2*01     8    ..............................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_107921

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            363     1e-102
IGHD4-17*01                                                                                           23.8    0.011 
IGHJ2*01                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	CGAGACCTCTG	TACGGTGACTAC	TT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATACGAGACCTCTGTACGGTGACTACTTCTGGTACTTCGATCTC	AKDTRPLYGDYFWYFDL	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	252	10	10	0	0	100
Total	N/A	N/A	252	242	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6637   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.0% (242/252)  IGHV3-9*01   47   .....................C....................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  E  I  V  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6637   91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGGTGAAATTGTCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (242/252)  IGHV3-9*01   137  ................................AGC..A.G..................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  L  N  T  L  T  A  E  D  T  A  F  Y  Y  C  A  K  D  T  R  P  L  Y  G  
                    Query_6637   181  AGAACTCCCTGTATCTGCAACTGAACACTCTGACAGCTGAGGACACGGCCTTCTATTACTGTGCAAAAGATACGAGACCTCTGTACGGTG  270
V  96.0% (242/252)  IGHV3-9*01   227  ....................A......G.....G..................G...................------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (12/12)   IGHD4-17*01  5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                      D  Y  F  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6637   271  ACTACTTCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  327
D  100.0% (12/12)   IGHD4-17*01  12   .....----------------------------------------------------  16
J  100.0% (50/50)   IGHJ2*01     4    -------..................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_110338

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           313     1e-87
IGHD3-3*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCCA	GGAGTGG	GCGGACGGACG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCAGGAGTGGGCGGACGGACGCTACTTTGACTGC	ARLQEWADGRYFDC	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  E  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_6638   1    ACCCTGTCCCTCACCTGCGAAGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  91.0% (222/244)  IGHV4-59*08  49   ..................ACT...................G........................................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  S  Y  S  G  R  T  D  Y  I  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_6638   91   TGGCTTGGGTATGTCTCTTATAGTGGGAGAACCGACTACATCCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCGAAGAAC  180
V  91.0% (222/244)  IGHV4-59*08  139  ...A........A...A...C........C...A......A...........................A..............C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  Y  L  K  L  S  S  V  I  A  E  D  T  A  L  Y  Y  C  A  R  L  Q  E  W  A  D  G  R  Y 
                    Query_6638   181  CAATTCTACCTGAAACTGAGCTCTGTGATCGCCGAAGACACGGCCCTCTATTATTGTGCGAGACTCCAGGAGTGGGCGGACGGACGCTAC  270
V  91.0% (222/244)  IGHV4-59*08  229  ..G....C......G.............C.....C..........G.G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  95.7% (45/47)    IGHJ4*02     2    --------------------------------------------------------------------------------------....  5

                                      -------->                                  
                                       F  D  C  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_6638   271  TTTGACTGCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  313
J  95.7% (45/47)    IGHJ4*02     6    .......A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_130641

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_6639   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_6639   91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_6639   181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_6639   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_283819

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           302     3e-84
IGHD7-27*01                                                                                           18.0    0.59 
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCGACTTGAAC	AACTGGGGA	TGGGCAGGGGAGGGTGTTTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCGACTTGAACAACTGGGGATGGGCAGGGGAGGGTGTTTATGATGTC	ATDLNNWGWAGEGVYDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	217	24	0	90


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  G  V  S  G  A  S  I  S  R  Y  Y  W  N  W  I  R  Q  P  P  G  K  A  M  E 
                    Query_6640   1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGTGCCTCCATCAGTCGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGCAATGGAG  90
V  90.0% (217/241)  IGHV4-59*01  49   ..................AC...........G..........A............G..........................G.C.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  T  Y  H  T  G  D  T  D  Y  N  P  S  L  R  N  R  V  A  I  S  M  D  A  S  K  N 
                    Query_6640   91   TGGATCGGATATACCTATCACACTGGGGACACCGACTACAACCCCTCCCTCAGGAATCGAGTCGCCATATCAATGGACGCGTCCAAGAAC  180
V  90.0% (217/241)  IGHV4-59*01  139  .....T..G....T....T...G....AG....A..................A..G.......A........G.A...A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  D  L  N  N  W  G  W  A  G 
                    Query_6640   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACGGCTGCGGACACGGCCGTATACTACTGTGCGACCGACTTGAACAACTGGGGATGGGCAGGG  270
V  90.0% (217/241)  IGHV4-59*01  229  .............................C.................G..T..........-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD7-27*01  3    ------------------------------------------------------------------------.........---------  11

                                      ----------------->                                  
                                       E  G  V  Y  D  V  W  G  Q  G  R  M  V  T  V  S  S  
                    Query_6640   271  GAGGGTGTTTATGATGTCTGGGGCCAAGGGAGAATGGTCACCGTCTCTTCAG  322
J  97.6% (40/41)    IGHJ3*01     10   -----------....................C....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_130640

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD5-18*01                                                                                           39.1    2e-07
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	113	1	0	99.1
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	242	233	9	0	96.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_6641   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  96.3% (233/242)  IGHV4-59*01  50   .....TCC...A....C.........................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_6641   94   GGATTGGGTATATCTATTACAGTGGGAATACCAACTATAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  96.3% (233/242)  IGHV4-59*01  140  ...........................GC........C....................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y  
                    Query_6641   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTACT  273
V  96.3% (233/242)  IGHV4-59*01  230  ..........................................................G...----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (20/20)   IGHD5-18*01  1    ---------------------------------------------------------------....................-------  20
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6641   274  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_308905

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           353     9e-100
IGHD6-19*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGGA	AGCAGTGG	N/A	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGGAAGCAGTGGCTATTACCACGGTATGGACGTC	ARSGSSGYYHGMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6642   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGGAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (237/248)  IGHV3-33*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  T  N  E  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  E  N  S  
                    Query_6642   91   AGTGGGTGGCCGTTATATGGTATGATGGAACTAATGAACATTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGAGAATTCCA  180
V  95.6% (237/248)  IGHV3-33*01  137  ..........A...................G....A..T.C....C....................................C.......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  S  G  S  S  G  Y  Y  
                    Query_6642   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGATCGGGAAGCAGTGGCTATTACC  270
V  95.6% (237/248)  IGHV3-33*01  227  ....................................C...............G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  7    --------------------------------------------------------------------------........--------  14
J  96.4% (53/55)    IGHJ6*02     8    ----------------------------------------------------------------------------------...C...T  15

                                      ------------->                                 
                                      H  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6642   271  ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  96.4% (53/55)    IGHJ6*02     16   ...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_141158

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           427     1e-121
IGHD2-8*02                                                                                            14.1    9.5   
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGT	TACTGGT	ACCAACGCCAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTC	ARLVTGTNATYGLDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  R  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_6643   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAGGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCAGCTA  90
V  97.2% (281/289)  IGHV5-51*03  6    ................................A................................G............C...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  R  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_6643   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGAGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  97.2% (281/289)  IGHV5-51*03  96   ........G...........................C......T..............................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6643   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.2% (281/289)  IGHV5-51*03  186  ...................................A.........C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  L  V  T  G  T  N  A  T  Y  G  L  D  V  W  G  Q  G  S  K  V  T  V  S  S
                    Query_6643   271  CATGTATTACTGTGCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTCTGGGGCCAAGGGAGCAAGGTCACCGTCTCCTC  360
V  97.2% (281/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-8*02   10   ------------------------.......-----------------------------------------------------------  16
J  93.9% (46/49)    IGHJ6*02     14   ------------------------------------------.......A.....................C..C...............  61

                                       
                                       
                    Query_6643   361  A  361
J  93.9% (46/49)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_164773

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTG	TACAGTTATGGTT	TCCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGTACAGTTATGGTTTCCAATACTACTTTGACTCC	ARLYSYGFQYYFDS	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  I  Y  D  Y  F  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_6644   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTATTTATGATTACTTCTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  92.0% (229/249)  IGHV4-39*01  49   ......................................C..C.G.AG.AG.....A.....G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  V  Y  Y  A  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_6644   91   CTGGAGTGGATTGGGAGTGTCTATTATGCTGGGAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCCGTAGACACGTCC  180
V  92.0% (229/249)  IGHV4-39*01  139  ..................A........AG.....G.................................C.....................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       E  N  Q  F  S  L  K  M  R  S  A  T  A  A  D  T  A  V  Y  F  C  A  R  L  Y  S  Y  G  F  Q 
                    Query_6644   181  GAGAACCAGTTCTCCCTGAAAATGAGGTCTGCGACCGCCGCAGACACGGCTGTGTATTTCTGTGCGAGATTGTACAGTTATGGTTTCCAA  270
V  92.0% (229/249)  IGHV4-39*01  229  A...................GC....C....T..........................A..........---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD5-18*01  6    ------------------------------------------------------------------------.....C.......-----  18

                                      -------------->                                  
                                       Y  Y  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_6644   271  TACTACTTTGACTCCTGGGGCCAGGGAGCCCTAGTCACCGTCTCCTCAG  319
J  93.8% (45/48)    IGHJ4*02     1    -............A.............A....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_15422

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            350     9e-99
IGHD2-21*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              58.4    1e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGACT	CATATTGTGGTGGT	ACCACCTGGTATCCCACAAAGCCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGACTCATATTGTGGTGGTACCACCTGGTATCCCACAAAGCCCGCTTGACTAT	ARDGTHIVVVPPGIPQSPLDY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6645   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTTAGCACCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-7*01   47   ...............................A...........T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  L  D  G  S  V  K  G  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6645   91   AGTGGGTGGCCAACATAAATCTAGATGGAAGTGTGAAAGGCTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (237/250)  IGHV3-7*01   137  ...................G.A...........A....TA..................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      N  N  S  P  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  G  T  H  I  V  V  
                    Query_6645   181  ACAACTCACCGTATCTGCAAATGAACAGCCTCAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGAGATGGGACTCATATTGTGGTGG  270
V  94.8% (237/250)  IGHV3-7*01   227  .G.......T.....................G....C...............G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD2-21*01  3    -----------------------------------------------------------------------------.............  15

                                      DR3-IMGT-------------------------->                                  
                                      V  P  P  G  I  P  Q  S  P  L  D  Y  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_6645   271  TACCACCTGGTATCCCACAAAGCCCGCTTGACTATTGGGGCCAGGGAGTTCTGGTCACCGTCTCCTCAG  339
D  100.0% (14/14)   IGHD2-21*01  16   .--------------------------------------------------------------------  16
J  90.5% (38/42)    IGHJ4*02     7    ---------------------------.......C............ACC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_15423

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           12.2    31   
IGHJ5*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TTGTC	GGATAC	CCCTCTCTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTGTCGGATACCCCTCTCTCGACTGGTTCGACCCC	VVGYPSLDWFDP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  S  S  R  Y  Y  W  G  W  I  R  Q  P  P  G  E  G 
                    Query_6646   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGCCTCCATCAGCAGTAGTCGTTACTACTGGGGTTGGATCCGCCAGCCCCCAGGGGAGGGG  90
V  91.4% (223/244)  IGHV4-39*01  49   .............................T.G................A.............C.....................A.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  Y  Y  P  E  S  P  Y  Y  N  P  S  L  N  Y  R  V  T  M  S  V  D  T  P 
                    Query_6646   91   CTGGAGTGGCTTGGGAGTATCTATTATCCTGAGAGCCCCTACTACAACCCGTCCCTCAATTATCGAGTCACCATGTCCGTAGACACGCCC  180
V  91.4% (223/244)  IGHV4-39*01  139  .........A.................AG..G....A......................GAG............A............T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  D  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  G  Y  P  S  L  D  W 
                    Query_6646   181  AAGAACCAGTTCTCCCTGAGACTTGACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGTTGTCGGATACCCCTCTCTCGACTGG  270
V  91.4% (223/244)  IGHV4-39*01  229  ...................AG..GAG...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD5-18*01  3    ---------------------------------------------------------------------......---------------  8
J  100.0% (48/48)   IGHJ5*02     4    -------------------------------------------------------------------------------------.....  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6646   271  TTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ5*02     9    ...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_15420

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           369     2e-104
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	ATGGACCTCAA	TACTACGATTCGGGGAGTTATTATAAC	GAAC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATGGACCTCAATACTACGATTCGGGGAGTTATTATAACGAACTTGACTAC	ANGPQYYDSGSYYNELDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	241	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6647   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (241/246)  IGHV3-21*01  47   ....................................C.......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6647   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTACTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.0% (241/246)  IGHV3-21*01  137  ..............................G...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  H  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  N  G  P  Q  Y  Y  D  S  
                    Query_6647   181  AGCACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAATGGACCTCAATACTACGATTCGG  270
V  98.0% (241/246)  IGHV3-21*01  227  ..A...............................................................------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.6% (25/27)    IGHD3-10*01  5    -----------------------------------------------------------------------------.....T.G.....  17

                                      IMGT--------------------->                                  
                                      G  S  Y  Y  N  E  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6647   271  GGAGTTATTATAACGAACTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  92.6% (25/27)    IGHD3-10*01  18   ..............----------------------------------------------  31
J  100.0% (42/42)   IGHJ4*02     7    ------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_15421

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           304     1e-84
IGHD3-16*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	221	27	0	89.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_6648   4    CCCTGAGACTCTCCTGTACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  89.1% (221/248)  IGHV4-61*01  50   .....TCC...A....C.....C.................C....G.AG.T..........C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S  
                    Query_6648   94   TGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCCA  183
V  89.1% (221/248)  IGHV4-61*01  140  ...A.........GT............G......CAC..A.........................G.CA....A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y  
                    Query_6648   184  AAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTATC  273
V  89.1% (221/248)  IGHV4-61*01  230  .G................A.................................G...............----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-16*02  24   ------------------------------------------------------------------------------------......  29

                                      ---------------->                                  
                                      R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_6648   274  GTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  324
D  100.0% (7/7)     IGHD3-16*02  30   .--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    -.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_15426

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           304     1e-84
IGHD3-3*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCCA	GGAGTGG	GCGGACGGACGCTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCAGGAGTGGGCGGACGGACGCTGCTTTGACTAC	ARLQEWADGRCFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	219	25	0	89.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  E  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_6649   1    ACCCTGTCCCTCACCTGCGAAGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  89.8% (219/244)  IGHV4-59*08  49   ..................ACT...................G........................................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  S  Y  S  G  R  T  D  Y  N  P  P  L  K  S  R  V  T  M  S  V  Y  T  S  K  N 
                    Query_6649   91   TGGCTTGGGTATGTCTCTTATAGTGGGAGAACCGACTACAACCCCCCCCTCAAGAGCCGAGTCACCATGTCAGTATACACGTCGAAGAAC  180
V  89.8% (219/244)  IGHV4-59*08  139  ...A........A...A...C........C...A...........T..........T...........A......G.......C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  Y  L  *  L  S  S  V  I  A  E  D  T  A  L  Y  Y  C  A  R  L  Q  E  W  A  D  G  R  C 
                    Query_6649   181  CAATTCTACCTGTAACTGAGCTCTGTGATCGCCGAAGACACGGCCCTCTATTATTGTGCGAGACTCCAGGAGTGGGCGGACGGACGCTGC  270
V  89.8% (219/244)  IGHV4-59*08  229  ..G....C....A.G.............C.....C..........G.G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_6649   271  TTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  313
J  97.7% (43/44)    IGHJ4*02     6    .....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_15427

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            420     7e-120
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	274	5	0	98.2


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_6650  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  98.2% (274/279)  IGHV6-1*01  26   ...........................................................G......G....AG.................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_6650  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.2% (274/279)  IGHV6-1*01  116  ..........................................................................................  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_6650  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.2% (274/279)  IGHV6-1*01  206  ..............A...........................................................................  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------CDR3-IMGT--------->                                  
                                     C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6650  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  98.2% (274/279)  IGHV6-1*01  296  .........---------------------------------------------------------  304
                                     C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02    4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_15424

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           366     2e-103
IGHD1-26*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GA	GGTGTAGTGGGAGC	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTAC	ARGGVVGAPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	262	28	0	90.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  T  A  G  G  S  F  S  S  Y
                    Query_6651   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGACCGCTGGAGGTAGTTTCAGCAGCTA  90
V  90.3% (262/290)  IGHV1-69*06  6    ..............................................................A.G.TT.......C.CC...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  M  R  Q  A  P  G  Q  G  L  E  W  M  G  A  I  M  P  L  Y  G  I  G  N  Y  A  Q
                    Query_6651   91   TGCTATCAGTTGGATGCGACAGGCCCCTGGGCAAGGGCTTGAGTGGATGGGAGCAATCATGCCTCTATATGGCATAGGAAACTACGCACA  180
V  90.3% (262/290)  IGHV1-69*06  96   .........C...G................A......................GG.....C...A.C.T...T.C..C............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  K  V  T  I  T  A  D  T  S  T  R  T  A  Y  M  E  L  S  G  L  R  S  A  D  T  A
                    Query_6651   181  GAAGTTCCAGGGCAAAGTCACGATTACCGCGGACACATCCACGAGGACAGCCTACATGGAGTTGAGTGGCCTGAGATCTGCGGACACGGC  270
V  90.3% (262/290)  IGHV1-69*06  186  ..............G....................A.........C...............C....CA............A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  G  G  V  V  G  A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_6651   271  CATGTATTATTGTGCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTACTGGGGCCAGGGAACTCTGGTCACCGTCTCCCCAG  353
V  90.3% (262/290)  IGHV1-69*06  276  .G.......C..........---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  92.9% (13/14)    IGHD1-26*01  1    ----------------------...A..........-----------------------------------------------  14
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------------........................C...............T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_15429

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            358     3e-101
IGHD3-10*01                                                                                           10.3    116   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GA	TCGGG	ATGGCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGATCGGGATGGCTCCCTGACTAC	VGGSGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  N  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6652   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGTAACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-7*01   47   ....................................C........G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  K  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6652   91   AGTGGGTGGCCAACATAAAGAAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (239/249)  IGHV3-7*01   137  ....................C.................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  V  G  G  S  G  W  L  P  D  
                    Query_6652   181  AGAACTCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGTGGGAGGATCGGGATGGCTCCCTGACT  270
V  96.0% (239/249)  IGHV3-7*01   227  ...................A...A............C..........................C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   -----------------------------------------------------------------------.....--------------  18
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6652   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_283818

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGATGG	CGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGGCGTTTGGGGGAGTCCGGGACAC	ARDDGVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6653   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6653   91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*01  139  ........GT........T.......G...............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  G  V  W  G  S  P  G 
                    Query_6653   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGGCGTTTGGGGGAGTCCGGGA  270
V  95.5% (234/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD3-16*01  13   -----------------------------------------------------------------------.............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6653   271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_308909

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           336     1e-94
IGHD2-2*01                                                                                            39.1    3e-07
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACG	TTGTAGTAGTACCAGCTGCT	TTTACGAG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACGTTGTAGTAGTACCAGCTGCTTTTACGAGATGGACGTC	ARVRCSSTSCFYEMDV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  N  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  Q  
                    Query_6654   4    CCCTGAGACTCTCCTGCACTGTCTCTGGCGACTCCATCAATAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGCAGT  93
V  94.2% (229/243)  IGHV4-59*01  50   .....TCC...A................T.G........G....T.........................................G...  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  K  N  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_6654   94   GGATTGGCTATATCTATTACAGTGGGAGCACCAAGAACAACCCTTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  94.2% (229/243)  IGHV4-59*01  140  .......G..........................CT.......C..............................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  C  S  S  T  S  C  F  
                    Query_6654   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGTACGTTGTAGTAGTACCAGCTGCTTTT  273
V  94.2% (229/243)  IGHV4-59*01  230  ..............................................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (20/20)   IGHD2-2*01   7    -------------------------------------------------------------------....................---  26

                                      ------------->                                 
                                      Y  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6654   274  ACGAGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  100.0% (42/42)   IGHJ6*02     21   -----..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_110330

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           299     3e-83
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              58.4    1e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCATTGGCTGG	GGCACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCATTGGCTGGGGCACTTACTATAATTACGGGATGGACGCC	ARGHRVSIGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	223	22	6	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_6655   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.8% (223/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  C  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_6655   91   CTGGAATGGATTGGGGAAATCATTCCTTGTGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.8% (223/251)  IGHV4-34*01  133  .....G................A..A.A......G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  I  G 
                    Query_6655   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCATTGGC  270
V  88.8% (223/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  A  A  V  S  F  S  S 
                    Query_6655   271  TGGGGCACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGGCCGCGGTCTCCTTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  87.5% (42/48)    IGHJ6*02     15   ------------------.....T.......T.............A..A.....A..G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_303599

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           294     6e-82
IGHD3-3*01                                                                                            29.5    2e-04
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTGATACAGGCTTT	CGATTTTTGGAGTGG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTGATACAGGCTTTCGATTTTTGGAGTGGCTACTTCGACTAC	AKDLIQAFDFWSGYFDY	237	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	19	5	0	79.2
FR3-IMGT	123	236	114	102	12	0	89.5
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	232	210	22	0	90.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  Y  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  A  V  I  
                    Query_6656   13   GTGCAGCCTCTGGATTCACGTTCAGTTACTATGGCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGATGGCAGTTATTT  102
V  90.5% (210/232)  IGHV3-30*18  65   ...................C......AG.........G.......................................G..........A.  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  Y  D  G  V  N  D  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  D  K  N  K  V  F  L  
                    Query_6656   103  CATATGATGGAGTTAATGACCACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGACAAGAACAAGGTGTTTCTGC  192
V  90.5% (210/232)  IGHV3-30*18  155  ...........AG....A.AT...............................................TC........C.C...A.....  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------------CDR3-IMGT----------------
                                      Q  M  N  S  L  R  V  E  D  T  A  T  Y  F  C  A  K  D  L  I  Q  A  F  D  F  W  S  G  Y  F  
                    Query_6656   193  AAATGAACAGCCTGAGAGTTGAGGACACAGCTACTTATTTCTGTGCGAAAGATCTGATACAGGCTTTCGATTTTTGGAGTGGCTACTTCG  282
V  90.5% (210/232)  IGHV3-30*18  245  ..................C.........G...GTG....A............--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (15/15)   IGHD3-3*01   7    -------------------------------------------------------------------...............--------  21
J  95.7% (45/47)    IGHJ4*02     2    ----------------------------------------------------------------------------------......T.  9

                                      ---->                                  
                                      D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6656   283  ACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  321
J  95.7% (45/47)    IGHJ4*02     10   ............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_303598

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD3-16*01                                                                                           12.2    36    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACTTCTCCCCGGGTCCCCC	TGGGGG	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACTTCTCCCCGGGTCCCCCTGGGGGCCCTTTGACTCT	ARTLLPGSPWGPFDS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  A  V  R  R  P  G  E  S  L  T  I  S  C  Q  G  S  G  Y  R  V  P  T  H
                    Query_6657   1    GCAGCTGGTGCAGTCTGGAGCAGCGGTGAGAAGGCCCGGGGAGTCTCTGACGATTTCCTGTCAGGGTTCTGGATACAGAGTTCCCACCCA  90
V  92.4% (267/289)  IGHV5-51*01  6    .......................A.....A..A.................A...C......A................CT..A...G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_6657   91   TTGGATCGGGTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  92.4% (267/289)  IGHV5-51*01  96   C........C......................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  V  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6657   181  GTCCTTCCAAGGCCAGGTCACCATCTCTGTCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACACCGC  270
V  92.4% (267/289)  IGHV5-51*01  186  ...........................A.C..........A...G........................C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        T  Y  F  C  A  R  T  L  L  P  G  S  P  W  G  P  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6657   271  CACATATTTCTGTGCGAGAACACTTCTCCCCGGGTCCCCCTGGGGGCCCTTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  92.4% (267/289)  IGHV5-51*01  276  ..TG....A..........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------......--------------------------------------------  22
J  95.5% (42/44)    IGHJ4*02     5    ------------------------------------------------........AC................................  46

                                        
                                        
                    Query_6657   361  AG  362
J  95.5% (42/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_303595

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           297     7e-83
IGHD3-9*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGACCCA	TACGGTATTTTG	GCTATTGAGAAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGTGACCCATACGGTATTTTGGCTATTGAGAAG	ATGDPYGILAIEK	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	42	9	0	82.4
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  N  Y  W  S  W  I  R  Q  S  P  A  K  G 
                    Query_6658   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGCCAACTACTGGAGTTGGATCCGCCAATCCCCTGCAAAGGGC  90
V  88.0% (220/250)  IGHV4-31*03  49   .................................................GTT..........C...........GCA...A.GG......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  T  T  E  Y  N  P  S  L  K  S  R  L  T  M  S  I  D  P  S 
                    Query_6658   91   CTCGAGTGGATTGGATACATCTATTATGGTGGGACCACCGAGTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCCATTGACCCGTCT  180
V  88.0% (220/250)  IGHV4-31*03  139  ..G...........G...........CA......G....T.C...........C............G.T.....A..AG.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       T  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  D  P  Y  G  I  L 
                    Query_6658   181  ACGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGTGACCCATACGGTATTTTG  270
V  88.0% (220/250)  IGHV4-31*03  229  .A...................C...G...........................G.............G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD3-9*01   5    ------------------------------------------------------------------------------....A.......  16

                                      ----------->                                
                                       A  I  E  K  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6658   271  GCTATTGAGAAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
J  100.0% (32/32)   IGHJ4*02     15   ------------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_303594

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           339     1e-95
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	N/A	N/A	GGGGCCTGTG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGCCTGTGTACTTTGACCAC	AKGPVYFDH	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6659   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-23*01  47   ....................G....................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  I  G  G  G  D  I  T  Y  Y  A  D  S  V  N  G  R  F  T  I  S  R  D  N  S  
                    Query_6659   91   AGTGGGTCTCAAGTATTATTGGTGGTGGTGATATCACATACTATGCAGACTCCGTCAACGGCCGGTTCACCATCTCCAGAGACAATTCGA  180
V  93.9% (232/247)  IGHV3-23*01  137  ...........GC.....G....A......G..G.........C...........G..G.............................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  T  L  Y  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  P  V  Y  F  D  H  
                    Query_6659   181  AGAATACGCTTTATCTGCAAATGAACGGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGGGGCCTGTGTACTTTGACCACT  270
V  93.9% (232/247)  IGHV3-23*01  227  ....C.....G...............A........................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  91.3% (42/46)    IGHJ4*02     3    -----------------------------------------------------------------------------.........T...  15

                                                                       
                                      W  G  Q  G  R  L  V  T  V  S  S  
                    Query_6659   271  GGGGCCAGGGAAGGTTGGTCACCGTCTCCTCAG  303
J  91.3% (42/46)    IGHJ4*02     16   ............CCC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_303596

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            374     8e-106
IGHD1-26*01                                                                                           12.2    36    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	9	77	69	66	3	0	95.7
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	100	14	0	87.7
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	289	264	25	0	91.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y 
                    Query_6660   9    CAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACCACTTAT  98
V  91.3% (264/289)  IGHV1-8*01   7    .....G...........G...............................................T........C..........G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F  A  Q 
                    Query_6660   99   GATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTTGCACAG  188
V  91.3% (264/289)  IGHV1-8*01   97   ................................A..G..............A..............C.G...T..........A.......  186
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D  T  A 
                    Query_6660   189  AGATTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGACACGGCC  278
V  91.3% (264/289)  IGHV1-8*01   187  .AG...C............................C.....A.................GC............G..C..AG.........  276
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                 
                                       I  Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_6660   279  ATATATTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  359
V  91.3% (264/289)  IGHV1-8*01   277  G.G................--------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   ----------------------------...G.....--------------------------------------------  18
J  100.0% (40/40)   IGHJ5*02     11   -----------------------------------------........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_303591

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           305     3e-85
IGHD3-10*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	CTATGTT	AAGGGGCTCTGATAG	TTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTATGTTAAGGGGCTCTGATAGTTTTAATACT	ATMLRGSDSFNT	250	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	63	36	27	3	6	75
FR2-IMGT	64	114	51	49	2	0	96.1
CDR2-IMGT	115	135	21	18	3	0	85.7
FR3-IMGT	136	249	114	102	12	0	89.5
CDR3-IMGT (germline)	250	253	4	4	0	0	100
Total	N/A	N/A	253	226	21	6	89.3


Alignments

                                      <--------FR1-IMGT---------><-------------CDR1-IMGT------------><--------------------FR2-IM
                                       T  L  S  L  T  C  N  V  S  G  G  S  I  I  I  S  T  N  G  Y  Y  W  G  W  I  R  Q  P  P  G 
                    Query_6661   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCATCATCATCAGTACAAATGGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGG  90
V  89.3% (226/253)  IGHV4-39*01  49   ...................C....................G..GT....------...................................  132
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S        S  Y  Y  W  G  W  I  R  Q  P  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  G  L  E  W  I  G  T  I  S  H  S  G  T  T  Y  Y  K  A  S  L  K  S  R  V  T  I  S  V  D 
                    Query_6661   91   AAGGGACTGGAGTGGATTGGGACTATCTCTCATAGTGGGACCACCTACTACAAGGCGTCCCTCAAGAGTCGAGTCACCATATCCGTCGAC  180
V  89.3% (226/253)  IGHV4-39*01  133  .....G................G.....A.T.........G............CC...............................A...  222
                                       K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-------------CDR3-IM
                                       T  S  K  N  Q  F  S  L  R  V  T  S  V  T  A  A  D  T  A  M  F  Y  C  A  T  M  L  R  G  S 
                    Query_6661   181  ACGTCGAAAAATCAGTTCTCCCTGAGGGTGACCTCTGTGACCGCCGCAGACACGGCTATGTTTTATTGTGCGACTATGTTAAGGGGCTCT  270
V  89.3% (226/253)  IGHV4-39*01  223  .....C..G..C.............A.C...G.........................G...A...C.......-----------------  295
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                   
D  100.0% (7/7)     IGHD3-10*02  7    -------------------------------------------------------------------------.......----------  13

                                      GT------------>                                 
                                       D  S  F  N  T  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_6661   271  GATAGTTTTAATACTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCA  318
J  93.0% (40/43)    IGHJ3*02     7    -----....G...TC.................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_303590

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            410     1e-116
IGHD2-2*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACGGCGTTATT	AGGATATTGTACTAGTAGCAGCTGCT	CGGAGTTCCACG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACGGCGTTATTAGGATATTGTACTAGTAGCAGCTGCTCGGAGTTCCACGACTTTGACTAC	ARTALLGYCTSSSCSEFHDFDY	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	275	13	0	95.5


Alignments

                                     <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                      Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T  S  Y 
                    Query_6662  2    CAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACAGCTTCACTAGTTAT  91
V  95.5% (275/288)  IGHV1-3*01  7    .....T......................................................................C.........C...  96
                                      Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                     --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                      A  I  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  G  G  D  G  N  T  K  Y  S  Q 
                    Query_6662  92   GCTATCCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGGTGGCGATGGTAACACAAAATATTCACAG  181
V  95.5% (275/288)  IGHV1-3*01  97   .....G.......................................................C....A.......................  186
                                      A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                     -----------------------------------------FR3-IMGT-----------------------------------------
                                      K  W  E  G  R  V  T  I  S  R  D  T  S  A  T  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  S 
                    Query_6662  182  AAGTGGGAGGGCAGAGTCACCATTAGCAGGGACACATCCGCGACCACAGCCTATATGGAGCTGAGCAGCCTGAGATCTGAAGACACGTCT  271
V  95.5% (275/288)  IGHV1-3*01  187  ....TCC..................C.................G.........C.................................G..  276
                                      K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                     -----------><----------------------------CDR3-IMGT--------------------------->            
                                      V  Y  Y  C  A  R  T  A  L  L  G  Y  C  T  S  S  S  C  S  E  F  H  D  F  D  Y  W  G  Q  G 
                    Query_6662  272  GTGTATTACTGTGCGAGAACGGCGTTATTAGGATATTGTACTAGTAGCAGCTGCTCGGAGTTCCACGACTTTGACTACTGGGGCCAGGGA  361
V  95.5% (275/288)  IGHV1-3*01  277  ..................------------------------------------------------------------------------  294
                                      V  Y  Y  C  A  R                                                                         
D  92.3% (24/26)    IGHD2-2*01  1    -----------------------------...........G.....C........-----------------------------------  26
J  100.0% (44/44)   IGHJ4*02    4    -------------------------------------------------------------------.......................  26

                                                          
                                      T  L  V  T  V  S  S 
                    Query_6662  362  ACCCTGGTCACCGTCTCCTCA  382
J  100.0% (44/44)   IGHJ4*02    27   .....................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_303593

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           357     1e-100
IGHD2-21*01                                                                                           12.2    31    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGAACCCCG	TATTCC	CGTCGCCA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGATGAACCCCGTATTCCCGTCGCCAAC	VRDEPRIPVAN	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  T  V  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6663   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCACTGTTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-48*03  47   ....................................C.....G.AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  G  G  S  T  I  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_6663   91   AGTGGGTTTCATACATTAGTAGTGGTGGTTCTACCATATACTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (239/250)  IGHV3-48*03  137  .......................A.....AG..........................A................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  P  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  E  P  R  I  P  V  
                    Query_6663   181  AGAACTCACTGTATCCGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGTGCGAGATGAACCCCGTATTCCCGTCG  270
V  95.6% (239/250)  IGHV3-48*03  227  ...............T...............................................C.A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*01  23   -------------------------------------------------------------------------------......-----  28

                                      ---->                                  
                                      A  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6663   271  CCAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (36/36)   IGHJ4*02     13   ---....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_164779

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           335     4e-94
IGHD6-13*01                                                                                           21.8    0.046
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACAAGGGTGGGCGCCCGGGGTGGG	GCAGCAGCTGG	CGTCCGGGGTGGGGCAGCAGCTGGCACAATCCATATTAT	TACGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACAAGGGTGGGCGCCCGGGGTGGGGCAGCAGCTGGCGTCCGGGGTGGGGCAGCAGCTGGCACAATCCATATTATTACGCTATGGACGTC	ARDDKGGRPGWGSSWRPGWGSSWHNPYYYAMDV	230	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	24	0	0	100
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	24	0	0	100
FR3-IMGT	116	229	114	110	4	0	96.5
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	219	5	0	97.8


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  C  I  S  S  S 
                    Query_6664   14   TCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATGCATTAGTAGTAGT  103
V  97.8% (219/224)  IGHV3-48*03  73   ............................................................................A.............  162
                                       S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  S  S  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  Q  N  S  L  Y  L  Q  I  D 
                    Query_6664   104  GGTAGTACCATATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCCAGAACTCACTGTATCTGCAAATCGAC  193
V  97.8% (219/224)  IGHV3-48*03  163  .................C.............................................A......................GA..  252
                                       G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><--------------------------------------------CDR3-IMGT
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  D  K  G  G  R  P  G  W  G  S  S  W  R  P  G 
                    Query_6664   194  AGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATGACAAGGGTGGGCGCCCGGGGTGGGGCAGCAGCTGGCGTCCGGGG  283
V  97.8% (219/224)  IGHV3-48*03  253  ............................................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  100.0% (11/11)   IGHD6-13*01  8    ----------------------------------------------------------------------...........---------  18

                                      -------------------------------------------->                                 
                                       W  G  S  S  W  H  N  P  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6664   284  TGGGGCAGCAGCTGGCACAATCCATATTATTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  361
J  97.9% (47/48)    IGHJ6*02     15   ------------------------------....G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_337242

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         282     4e-78
IGHD2-15*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GGAGAGGGTTGTCGCGCTTCTGCAGTGCG	GGTAGCTGC	GAACTGTC	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGGGAGAGGGTTGTCGCGCTTCTGCAGTGCGGGTAGCTGCGAACTGTCCGGTATGGACGTC	ATGRGLSRFCSAGSCELSGMDV	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	94	20	0	82.5
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	215	35	0	86


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  V  V  S  G  V  S  I  T  S  G  T  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_6665     1    ACCCTGTCCCTCACCTGCGTTGTCTCTGGTGTCTCCATTACCAGTGGGACTTCCTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGT  90
V  86.0% (215/250)  IGHV4-30-4*01  49   ..................AC...........G......C.G......TGA..A....................................C  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  N  I  Y  H  S  G  N  T  Y  Y  S  P  S  L  E  S  R  I  S  I  S  I  N  N  S 
                    Query_6665     91   CTGGAGTGGATTGGGAACATCTATCACAGCGGGAACACCTACTACAGCCCGTCCCTCGAGAGTCGAATTAGTATATCCATAAATAACTCC  180
V  86.0% (215/250)  IGHV4-30-4*01  139  ...............T........T....T....G...........A..........A........G...CC.....AG..G.C.CG...  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------------
                                         K  N  Q  V  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  R  G  L  S  R  F 
                    Query_6665     181  AAAAATCAGGTCTCCCTGAACCTGAACTCTGTAACAGCCGCGGACACGGCCGTGTATTATTGTGCCACAGGGAGAGGGTTGTCGCGCTTC  270
V  86.0% (215/250)  IGHV4-30-4*01  229  ..G..C...T..........G....G......G..T.....A.................C.......G..--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                        --CDR3-IMGT--------------------------->                                 
                                         C  S  A  G  S  C  E  L  S  G  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_6665     271  TGCAGTGCGGGTAGCTGCGAACTGTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  342
D  100.0% (9/9)     IGHD2-15*01    17   ---------.........------------------------------------------------------  25
J  97.8% (45/46)    IGHJ6*02       17   --------------------------..................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_337243

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         396     2e-112
IGHD5-12*01                                                                                           10.3    118   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	GTGGC	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGCGGCCTAC	ARVAAY	264	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	77	27	27	0	0	100
FR2-IMGT	78	128	51	49	2	0	96.1
CDR2-IMGT	129	149	21	20	1	0	95.2
FR3-IMGT	150	263	114	111	3	0	97.4
CDR3-IMGT (germline)	264	269	6	6	0	0	100
Total	N/A	N/A	269	261	8	0	97


Alignments

                                        <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                           G  L  V  K  P  S  E  T  L  S  L  N  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  V  
                    Query_6666     1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCAACTGCGCTGTCTCTGGTTACTCCATCAGCAGTGGTTACTACTGGGGCTGGGTCC  90
V  97.0% (261/269)  IGHV4-38-2*01  26   ................T...................C.................................................A...  115
                                           G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  

                                        --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                        R  Q  P  P  G  K  G  L  E  W  I  G  I  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  
                    Query_6666     91   GGCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGATTATCTACCATAGTGGGAGCACCTACTACAACCCGTCCCTCAACAGTCGAGTCA  180
V  97.0% (261/269)  IGHV4-38-2*01  116  ....................................G......T...................................G..........  205
                                        R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  

                                        ----------------------FR3-IMGT----------------------------------------------------><----CD
                                        T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  
                    Query_6666     181  CCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAACTCTGTTACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAG  270
V  97.0% (261/269)  IGHV4-38-2*01  206  .............................................G......G....................................-  294
                                        T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  
D  100.0% (5/5)     IGHD5-12*01    10   -----------------------------------------------------------------------------------------.  10

                                        R3-IMGT--->                                  
                                        V  A  A  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_6666     271  TGGCGGCCTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  315
D  100.0% (5/5)     IGHD5-12*01    11   ....-----------------------------------------  14
J  97.4% (37/38)    IGHJ4*02       11   -------.................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_337241

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           411     4e-117
IGHD7-27*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	TCTGGGA	AACTGGGG	TAGGA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATCTGGGAAACTGGGGTAGGAGACTAC	AIWETGVGDY	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	275	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  R  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  R  S  Y
                    Query_6667   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGGAGCTA  90
V  95.8% (275/287)  IGHV1-69*01  6    ..................G.............A...................................................C.....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  G  I  I  P  L  F  R  T  P  N  Y  A  Q
                    Query_6667   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGAGGGATCATCCCTCTCTTTCGGACACCAAACTACGCACA  180
V  95.8% (275/287)  IGHV1-69*01  96   ..............................................A.................A.....G.T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  Q  L  S  S  L  R  S  E  D  T  A
                    Query_6667   181  GAAGTTCCAGGACAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGCAACTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.8% (275/287)  IGHV1-69*01  186  ...........G..............................................G.G.............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        V  Y  Y  C  A  I  W  E  T  G  V  G  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_6667   271  CGTATATTACTGTGCGATCTGGGAAACTGGGGTAGGAGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  347
V  95.8% (275/287)  IGHV1-69*01  276  ...G.............------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                              
D  100.0% (8/8)     IGHD7-27*01  3    ------------------------........---------------------------------------------  10
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------...........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_103619

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            369     2e-104
IGHD3-3*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGTAGTCAAG	ACGATTTTTGGAGTGGTT	TGTTCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTAGTCAAGACGATTTTTGGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTC	ARDGSQDDFWSGLFHYYYGMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  P  P  G  K  G  L  
                    Query_6668  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGGTATTGGATGAGTTGGGTCCGCCAACCTCCAGGGAAGGGGCTGG  90
V  97.2% (243/250)  IGHV3-7*03  47   ..............................................C...........C...........GG..................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6668  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (243/250)  IGHV3-7*03  137  ..........................................................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><---------------------------
                                     K  N  S  V  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  Q  D  D  F  
                    Query_6668  181  AGAACTCAGTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAGAGATGGTAGTCAAGACGATTTTT  270
V  97.2% (243/250)  IGHV3-7*03  227  ........C........C..................................G.................--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-3*01  6    ---------------------------------------------------------------------------------.........  14

                                     -CDR3-IMGT--------------------------->                                 
                                     W  S  G  L  F  H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6668  271  GGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  100.0% (18/18)   IGHD3-3*01  15   .........--------------------------------------------------------------  23
J  96.4% (54/56)    IGHJ6*02    7    ---------------.......C..C.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_337244

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           294     6e-82
IGHD3-10*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              39.1    5e-07


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACGTC	TTACTATGTTTCGGGG	CCACCGACCGAC	CCAGG	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	216	28	0	88.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  K  D  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6669   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAAGGACTACGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  88.5% (216/244)  IGHV3-23*01  47   ..........................................GCAG...T.......G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  N  D  T  G  L  T  T  Y  Y  A  D  S  V  K  G  R  F  A  I  S  R  D  N  S  
                    Query_6669   91   AATGGGTCTCAAGTATTAATGATACTGGTCTTACTACATACTACGCAGACTCCGTGAAGGGCCGATTCGCCATCTCCAGAGACAATTCCA  180
V  88.5% (216/244)  IGHV3-23*01  137  .G.........GC.....G..G..G....GG..GC.............................G...A.....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT---------------------------------------------------->                            
                                      K  N  I  V  Y  L  Q  M  N  S  L  R  G  A  D  T  A  I  Y  Y  C  A  R  L  T  M  F  R  G  H  
                    Query_6669   181  AAAACATTGTGTATCTGCAAATGAACAGCCTGAGAGGCGCGGACACGGCCATTTATTATTGTGCACGTCTTACTATGTTTCGGGGCCACC  270
V  88.5% (216/244)  IGHV3-23*01  227  .G....CGC...........................C..A..........G.A.....C.....--------------------------  290
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.8% (15/16)    IGHD3-10*01  4    ---------------------------------------------------------------------........G.......-----  19

                                                                          
                                      R  P  T  Q  G  A  L  V  T  V  S  S  
                    Query_6669   271  GACCGACCCAGGGAGCCCTAGTCACCGTCTCTTCAG  306
J  89.7% (26/29)    IGHJ4*02     20   -------.......A....G...........C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_233439

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           254     1e-69
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATAGCTATA	ATGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATAGCTATAATGTC	ARGLLIEDPNYVWGSFRRNHNSYNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	41	10	0	80.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	93	21	0	81.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	203	41	0	83.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  G  L  E 
                    Query_6670   1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  83.2% (203/244)  IGHV4-59*01  49   ..................A....C.......G.......A...G..........AG....A.C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_6670   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  83.2% (203/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  R  A  R  G  L  L  I  E  D  P  N  Y 
                    Query_6670   181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACGTATTTCCGTGCGAGAGGTCTTCTTATCGAAGATCCCAACTAT  270
V  83.2% (203/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GT.....A.T.........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  N  S  Y  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_6670   271  GTTTGGGGGAGTTTTCGCCGCAATCACAATAGCTATAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  94.9% (37/39)    IGHJ3*01     12   -------------------------------------....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_337248

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         414     5e-118
IGHD4-17*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATTTTCA	TGACTACGATGAC	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTCATGACTACGATGACAACTACTTTGACCAG	ARHFHDYDDNYFDQ	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  D  T  F  T  N  Y
                    Query_6671     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGAGACACCTTTACCAACTA  90
V  95.8% (277/289)  IGHV5-10-1*01  6    .........................................................................T...G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  R  P  G  K  G  L  E  W  M  G  R  I  D  P  R  E  S  Y  N  D  Y  S  P
                    Query_6671     91   CTGGATCAGCTGGGTGCGCCAGAGGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTCGTGAATCTTATAACGATTACAGCCC  180
V  95.8% (277/289)  IGHV5-10-1*01  96   .......................T........................................A....C.......C.A.C........  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  S  I  S  A  D  Q  S  T  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6671     181  GTCCTTCCAAGGCCACGTCAGCATCTCAGCTGACCAGTCCACCAGCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.8% (277/289)  IGHV5-10-1*01  186  ....................C.............A......T................................................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------CDR3-IMGT--------------->                                  
                                          M  Y  Y  C  A  R  H  F  H  D  Y  D  D  N  Y  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6671     271  CATGTATTACTGTGCGAGACATTTTCATGACTACGATGACAACTACTTTGACCAGTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  359
V  95.8% (277/289)  IGHV5-10-1*01  276  ...................----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                       
D  92.3% (12/13)    IGHD4-17*01    1    ---------------------------........G....-------------------------------------------------  13
J  93.8% (45/48)    IGHJ4*02       1    -----------------------------------------...........T.C.......................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_337249

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           352     3e-99
IGHD2-15*01                                                                                           21.8    0.041
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGAC	TAGTGGTGGGAGCT	ACAGTTGGGA	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGACTAGTGGTGGGAGCTACAGTTGGGATTTTGATCTC	AKGTSGGSYSWDFDL	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  E  F  T  F  S  S  Y  S  M  S  W  V  R  H  A  P  G  K  G  L  
                    Query_6672   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGAATTTACCTTTAGTAGCTATAGCATGAGTTGGGTCCGCCACGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-23*01  47   ..............................G...C........C......GC......C...........G...................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  V  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6672   91   AGTGGGTCTCAGCTATTGTTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (237/249)  IGHV3-23*01  137  .................AG.......................................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  G  T  S  G  G  S  Y  
                    Query_6672   181  AGAACACGCTGTATCTGGAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTTTATTACTGTGCGAAAGGGACTAGTGGTGGGAGCTACA  270
V  95.2% (237/249)  IGHV3-23*01  227  .................C..................C...............A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD2-15*01  10   -------------------------------------------------------------------------.........T....---  23

                                      ---------------->                                  
                                      S  W  D  F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6672   271  GTTGGGATTTTGATCTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  97.7% (43/44)    IGHJ3*01     7    -------.......G....................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_162537

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           313     1e-87
IGHD3-10*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCGGAGGTTCC	ACTATGG	CCACCTGACACCAC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCGGAGGTTCCACTATGGCCACCTGACACCACTTGAGTAC	ASRRFHYGHLTPLEY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	221	21	0	91.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  N  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_6673   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAACTGGGTCCGCCAGACCCCAGGGAGGGGGCTGGAG  90
V  91.3% (221/242)  IGHV4-34*01  49   .......................................................G....A........C.........A..........  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  V  N  H  S  G  N  S  N  S  N  P  S  L  K  S  R  V  T  I  L  V  D  T  S  K  N 
                    Query_6673   91   TGGCTTGGGGAAGTCAATCATAGTGGCAACAGCAACTCCAACCCGTCCCTCAAGAGTCGGGTCACCATATTAGTCGACACGTCCAAGAAC  180
V  91.3% (221/242)  IGHV4-34*01  139  ...A........A.............A.G..C.....A.....................A..........C...A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  L  Y  Y  C  A  S  R  R  F  H  Y  G  H  L  T 
                    Query_6673   181  CAGTTTTCCCTGAAACTGGCTTCTGTGACCGCCGCGGACACGGCTCTTTATTATTGTGCGAGTCGGAGGTTCCACTATGGCCACCTGACA  270
V  91.3% (221/242)  IGHV4-34*01  229  .....C........G...AGC........................G.G.....C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD3-10*01  6    -------------------------------------------------------------------------.......----------  12

                                      ----------->                                  
                                       P  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6673   271  CCACTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.6% (41/42)    IGHJ4*02     7    ----....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_54998

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            413     2e-117
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGTGAGGAACCAGCTCGTATCCGACTTC	ARAVRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  S  Y
                    Query_6674  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCAGCAGTTA  90
V  95.5% (277/290)  IGHV1-8*01  6    ...................................................................................C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  E
                    Query_6674  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCAGA  180
V  95.5% (277/290)  IGHV1-8*01  96   ........A.........................................................C.....................C.  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  G  D  T  S  I  T  T  A  Y  M  E  M  S  S  L  N  S  E  D  T  A
                    Query_6674  181  GAAGTTCCAGGGCAGAGTCACCATGACCGGGGACACTTCCATAACCACAGCCTACATGGAGATGAGCAGCCTAAACTCTGAAGACACGGC  270
V  95.5% (277/290)  IGHV1-8*01  186  ............................A..A....C.......G................C..........G.GA.....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  V  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6674  271  CGTGTATTACTGTGCGAGAGCGGTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.5% (277/290)  IGHV1-8*01  276  ....................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_67577

Length=407
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            385     5e-109
IGHD2-15*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCACCCCAGTATCGT	GTGGTGGCTGCTAC	GGGAC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCACCCCAGTATCGTGTGGTGGCTGCTACGGGACACTACTATTACGGTATGGACGTC	AAPQYRVVAATGHYYYGMDV	289	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	101	13	0	88.6
CDR3-IMGT (germline)	289	291	3	3	0	0	100
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  
                    Query_6675   2    AGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGCTACACCTTCACTA  91
V  92.4% (268/290)  IGHV1-8*01   2    ....G........G........................................A.....................A...........C.  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  S  S  G  N  T  G  F  
                    Query_6675   92   GTTATGACATCAACTGGGTGCGGCAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCAAGCAGTGGTAACACAGGCTTTG  181
V  92.4% (268/290)  IGHV1-8*01   92   .......T..............A............................................T.A.................A..  181
                                      S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  K  F  Q  G  R  V  S  L  T  R  D  I  S  T  S  T  G  Y  M  E  L  S  S  L  R  S  E  D  
                    Query_6675   182  CACAGAAGTTCCAGGGCAGAGTCAGTTTGACCAGGGATATTTCCACAAGCACAGGCTACATGGAACTGAGTAGCCTGAGATCTGAGGACA  271
V  92.4% (268/290)  IGHV1-8*01   182  ........................CCA........A.C.CC....T........C.........G.....C...................  271
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><-------------------------CDR3-IMGT------------------------>             
                                      T  A  V  Y  F  C  A  A  P  Q  Y  R  V  V  A  A  T  G  H  Y  Y  Y  G  M  D  V  W  G  Q  G  
                    Query_6675   272  CGGCCGTGTATTTCTGTGCGGCACCCCAGTATCGTGTGGTGGCTGCTACGGGACACTACTATTACGGTATGGACGTCTGGGGCCAAGGGA  361
V  92.4% (268/290)  IGHV1-8*01   272  ............A.......----------------------------------------------------------------------  291
                                      T  A  V  Y  Y  C  A                                                                       
D  92.9% (13/14)    IGHD2-15*01  15   -----------------------------------.....A........-----------------------------------------  28
J  98.2% (55/56)    IGHJ6*02     7    ------------------------------------------------------.......C............................  42

                                                          
                                      T  T  V  T  V  S  S 
                    Query_6675   362  CCACGGTCACCGTCTCCTCA  381
J  98.2% (55/56)    IGHJ6*02     43   ....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39867768


Query= Query_115043

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD3-10*01                                                                                           12.2    30   
IGHJ4*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCATGTCCCC	ATTACT	TCCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCATGTCCCCATTACTTCCATTGACTTC	ARAHVPITSIDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  A  I  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6676   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCGCCATCAGTGGTTATTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   ...................C.............T........A....C.......G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  N  G  N  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  K 
                    Query_6676   91   TGGATTGGCTATATCTATTACAATGGAAACACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCGAAGAAA  180
V  91.4% (223/244)  IGHV4-59*01  139  ........G.............G...G.G....A..................................A...G..........C.....C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  K  M  T  S  M  T  A  A  D  T  A  V  Y  H  C  A  R  A  H  V  P  I  T  S  I  D 
                    Query_6676   181  CACTTCTCCCTGAAGATGACCTCCATGACCGCTGCGGACACGGCCGTCTATCACTGTGCGAGAGCCCATGTCCCCATTACTTCCATTGAC  270
V  91.4% (223/244)  IGHV4-59*01  229  ..G............C...G...TG......................G...T............--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-10*01  3    ---------------------------------------------------------------------------......---------  8
J  87.8% (36/41)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                 
                                       F  W  G  L  G  A  L  V  S  V  S  S 
                    Query_6676   271  TTCTGGGGCCTGGGAGCCCTGGTCTCCGTCTCGTCA  306
J  87.8% (36/41)    IGHJ4*02     12   .A........A....A........A.......C...  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_208539

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     4e-95
IGHD3-10*02                                                                                           14.1    8.2  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTGGGTGGAATTA	ACTATGT	CTAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTGGGTGGAATTAACTATGTCTACGACTAC	AKDVGGINYVYDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  A  Y  A  M  S  W  V  R  Q  A  P  G  R  G  P  
                    Query_6677   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTTAACGCCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAGGGGGCCGG  90
V  93.2% (233/250)  IGHV3-23*01  47   ...............................A..........G.AG............C......................A.....T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  T  G  G  R  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  S  D  N  S  
                    Query_6677   91   AGTGGGTCTCAACTATCAGTGGTACTGGTGGTAGAACATACTACGCAGACTCCGTGAAAGGCCGGTTCACCATCTCCAGCGACAACTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  ...........G....T.......G.........C.......................G....................A.....T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  V  G  G  I  N  Y  
                    Query_6677   181  AGAACACACTGTTTCTGCAAATGAACAGCCTCAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATGTGGGTGGAATTAACTATG  270
V  93.2% (233/250)  IGHV3-23*01  227  .......G....A..................G......................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-10*02  6    ------------------------------------------------------------------------------------......  11

                                      ---------->                                  
                                      V  Y  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_6677   271  TCTACGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  315
D  100.0% (7/7)     IGHD3-10*02  12   .--------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -----..................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_208538

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAGTTAT	CAGGGT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGGCTCCACCCC	ARSGSGSYQGWLHP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  P  Y  Y  W  I  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6678   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGTCCTTACTACTGGATCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.1% (223/242)  IGHV4-59*01  49   ..................A............G..........AG...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  H  I  F  Y  T  G  S  T  K  Y  K  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  K 
                    Query_6678   91   TGGCTTGGCCATATCTTTTACACTGGGAGCACCAAATACAAGCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCCAGGAAG  180
V  92.1% (223/242)  IGHV4-59*01  139  ...A....GT......A.....G............C.....C..........................A...G............A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  S  Y  Q  G  W 
                    Query_6678   181  CAGTTCTCCCTGAAACTGCGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGG  270
V  92.1% (223/242)  IGHV4-59*01  229  ..............G...A.C.........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (15/15)   IGHD3-10*01  11   ------------------------------------------------------------------...............---------  25
J  87.0% (40/46)    IGHJ5*02     6    ---------------------------------------------------------------------------------------...  8

                                      -------->                                  
                                       L  H  P  W  G  L  G  R  L  V  I  V  S  S  
                    Query_6678   271  CTCCACCCCTGGGGCCTGGGAAGACTGGTCATCGTCTCCTCAG  313
J  87.0% (40/46)    IGHJ5*02     9    T..G............A.....CC.......C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_225793

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           341     5e-96
IGHD2-2*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTGGGC	ACCAGCTG	AGCCGGG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTGGGCACCAGCTGAGCCGGGTGACTCC	ARHWAPAEPGDS	267	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	80	30	27	3	0	90
FR2-IMGT	81	131	51	49	2	0	96.1
CDR2-IMGT	132	152	21	16	5	0	76.2
FR3-IMGT	153	266	114	100	14	0	87.7
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	246	28	0	89.8


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  N  L  S  L  I  C  T  V  S  G  A  S  I  S  S  S  H  Y  Y  W  G  W  
                    Query_6679   1    CAGGACTGGTGAAGCCCTCGGAGAACCTGTCCCTCATATGCACTGTCTCTGGTGCCTCCATCAGCAGTAGTCATTACTACTGGGGCTGGA  90
V  89.8% (246/274)  IGHV4-39*01  26   ................T.......C...........CC................G................AG.................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  S  P  G  K  G  L  E  W  I  G  S  I  D  Y  D  G  R  T  F  H  N  P  S  L  K  S  R  
                    Query_6679   91   TCCGCCAGTCCCCAGGGAAGGGCCTGGAGTGGATTGGGAGTATCGATTACGATGGGAGAACCTTCCACAATCCGTCTCTCAAGAGTCGAG  180
V  89.8% (246/274)  IGHV4-39*01  116  ........C.............G.....................T....TAG......C....A.T....C.....C.............  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  V  S  S  D  T  S  K  N  Q  F  S  V  R  L  S  S  V  T  A  A  D  T  A  L  Y  Y  W  A  
                    Query_6679   181  TCACCGTGTCCTCAGACACGTCCAAGAACCAGTTCTCCGTGAGGCTGAGTTCCGTGACCGCCGCAGACACGGCTCTGTATTACTGGGCGA  270
V  89.8% (246/274)  IGHV4-39*01  206  .....A.A...GT.........................C...A......C..T.....................G..........T....  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------CDR3-IMGT------------>                                  
                                      R  H  W  A  P  A  E  P  G  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6679   271  GACATTGGGCACCAGCTGAGCCGGGTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  336
V  89.8% (246/274)  IGHV4-39*01  296  ....--------------------------------------------------------------  299
                                      R                                                                 
D  100.0% (8/8)     IGHD2-2*01   17   ----------........------------------------------------------------  24
J  95.1% (39/41)    IGHJ4*02     8    -------------------------.....A..............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_332149

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           232     3e-63
IGHD3-10*01                                                                                           10.3    117  
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCAC	GGTTC	C	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCACGGTTCCTGATGCTTTTGATGTC	ARGTVPDAFDV	245	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	16	8	0	66.7
FR2-IMGT	41	91	51	45	6	0	88.2
CDR2-IMGT	92	130	39	18	6	15	46.2
FR3-IMGT	131	244	114	106	8	0	93
CDR3-IMGT (germline)	245	251	7	7	0	0	100
Total	N/A	N/A	238	195	28	15	81.9


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-----------
                                       S  G  F  D  V  N  E  Y  T  M  N  W  V  R  Q  T  P  E  K  G  M  E  W  V  S  S  M  S  S  S 
                    Query_6680   14   TCTGGATTCGACGTCAATGAATATACCATGAACTGGGTGCGTCAGACTCCAGAGAAGGGCATGGAGTGGGTCTCATCCATGAGTAGCTCA  103
V  81.9% (195/238)  IGHV3-21*01  73   .........AC.T...G.AGC....G............C..C...G......G......GC...................T.....T---  159
                                       S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S    

                                      ---CDR2-IMGT--------------><----------------------------------------------------FR3-IMGT--
                                       S  K  R  I  S  T  G  S  R  Y  Y  P  D  S  A  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L 
                    Query_6680   104  TCCAAGCGTATCAGTACTGGTTCCAGATACTACCCAGACTCAGCGAAGGGCCGCTTCACCATCTCCAGAGACAACGCCAAGAACTCACTA  193
V  81.9% (195/238)  IGHV3-21*01  160  ------------....G.A...A..T.......G.........T.........A...................................G  237
                                                   S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L 

                                      --------------------------------------------------><-----------CDR3-IMGT----------->      
                                       Y  L  Q  I  N  N  L  R  T  D  D  T  A  V  Y  Y  C  A  R  G  T  V  P  D  A  F  D  V  W  G 
                    Query_6680   194  TATCTGCAAATCAACAACCTGAGAACCGACGACACGGCTGTGTATTACTGTGCGAGAGGCACGGTTCCTGATGCTTTTGATGTCTGGGGC  283
V  81.9% (195/238)  IGHV3-21*01  238  ...........G....G.......G....G............................--------------------------------  295
                                       Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                  
D  100.0% (5/5)     IGHD3-10*01  11   --------------------------------------------------------------.....-----------------------  15
J  98.0% (48/49)    IGHJ3*01     1    --------------------------------------------------------------------......................  22

                                                                 
                                       Q  G  T  K  V  T  V  S  S 
                    Query_6680   284  CAAGGGACAAAGGTCACCGTCTCTTCA  310
J  98.0% (48/49)    IGHJ3*01     23   ..........T................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_332146

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           397     8e-113
IGHD5-12*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTAAACGAAA	ATAGTGGCTACGATTA	TGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTAAACGAAAATAGTGGCTACGATTATGCTGACTAC	ARLNENSGYDYADY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	271	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  G  F  A  S  Y 
                    Query_6681   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACGGCTTTGCCAGCTAC  91
V  94.1% (271/288)  IGHV1-18*04  7    ...........................................................................AC....A........  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  F  S  T  Y  N  G  D  T  N  Y  A  Q 
                    Query_6681   92   TCTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGTCTTGAGTGGATGGGACGGTTCAGCACTTACAATGGTGACACAAATTATGCACAG  181
V  94.1% (271/288)  IGHV1-18*04  97   GG.A...............................G...............T..A.....G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_6681   182  AACCTCCAGGGCAGAGTCACCCTGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTTAGATCTGACGACACGGCC  271
V  94.1% (271/288)  IGHV1-18*04  187  ..G..................A.................................................G..................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                
                                       V  Y  Y  C  A  R  L  N  E  N  S  G  Y  D  Y  A  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6681   272  GTTTATTATTGTGCGAGATTAAACGAAAATAGTGGCTACGATTATGCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  357
V  94.1% (271/288)  IGHV1-18*04  277  ..G.....C.........--------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                     
D  100.0% (16/16)   IGHD5-12*01  7    ----------------------------................------------------------------------------  22
J  100.0% (39/39)   IGHJ4*02     8    -----------------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_208530

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           322     2e-90
IGHD6-19*01                                                                                           27.6    8e-04
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGGGGA	AGCAGTGGCTGGTA	GATATTCAGGAA	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGGGGAAGCAGTGGCTGGTAGATATTCAGGAATACGACTACTATGGTATGGACGTC	ARWGKQWLVDIQEYDYYGMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  A  F  G  D  Y  S  M  N  W  V  R  Q  A  P  G  T  G  L  
                    Query_6682   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCGCCTTCGGTGATTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGACGGGGCTGG  90
V  91.5% (227/248)  IGHV3-21*01  47   .....................C.............A.....A..AGC..................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  L  T  S  Y  Y  T  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6682   91   AGTGGGTCTCATCTATTAGTCTTACTAGTTATTACACATACTACGCGGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.5% (227/248)  IGHV3-21*01  137  .............C......AG..G....AG.....T.........A......G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  W  G  K  Q  W  L  V  
                    Query_6682   181  AGAATACACTGTATCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCGGTTTATTACTGTGCGAGATGGGGGAAGCAGTGGCTGGTAG  270
V  91.5% (227/248)  IGHV3-21*01  227  ....CT...................C.......................T..G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD6-19*01  7    ---------------------------------------------------------------------------..............-  20

                                      DR3-IMGT-------------------------->                                 
                                      D  I  Q  E  Y  D  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6682   271  ATATTCAGGAATACGACTACTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  338
J  94.7% (54/57)    IGHJ6*02     6    -----------...T.......C.........................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_332144

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           319     2e-89
IGHD2-15*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGAA	CCTCGGG	GGATACTGTAGGGGGGGT	TGTTGTTCTCCCCAGACCTCCGGAC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAACCTCGGGGGATACTGTAGGGGGGGTTGTTGTTCTCCCCAGACCTCCGGACTGGACGTC	TNLGGYCRGGCCSPQTSGLDV	241	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	20	6	0	76.9
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	126	24	21	3	0	87.5
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	4	1	0	80
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  S  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_6683   2    CCCTGTCCCTCACCTGCGCAGCCTCCGGATCCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGT  91
V  91.8% (224/244)  IGHV3-30*18  50   .....AGA...T....T........T....T...........................................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  A  I  I  S  Y  D  G  V  K  K  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  E  N  S  K  
                    Query_6683   92   GGGTGGCAATAATATCATATGATGGAGTTAAGAAATATTATGCAGACTCCGTGAAGGGCCGATTCTCCATCTCCAGAGAAAATTCCAAGA  181
V  91.8% (224/244)  IGHV3-30*18  140  ........G.T...............AG...T.....C...........................A.............C..........  229
                                      W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------------------CDR3
                                      N  T  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  H  C  T  N  L  G  G  Y  C  R  G  G  
                    Query_6683   182  ACACACTGTATCTGCAAATGAACAGCCTGAGACCTGAGGACACGGCTCTGTATCACTGTACGAACCTCGGGGGATACTGTAGGGGGGGTT  271
V  91.8% (224/244)  IGHV3-30*18  230  ....G...........................G..............G.....T.....G....--------------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  83.3% (15/18)    IGHD2-15*01  2    -----------------------------------------------------------------------.....T.....T..T...-  19

                                      -IMGT-------------------------->                                 
                                      C  C  S  P  Q  T  S  G  L  D  V  W  G  Q  G  T  T  V  P  V  S  S 
                    Query_6683   272  GTTGTTCTCCCCAGACCTCCGGACTGGACGTCTGGGGCCAAGGGACCACGGTCCCCGTCTCCTCA  336
J  97.6% (40/41)    IGHJ6*02     22   ------------------------.............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_223333

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           37.2    9e-07
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCTT	CTATGATAGCAGTGGTTATTAC	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCTTCTATGATAGCAGTGGTTATTACCACTTTGACTAT	VVFYDSSGYYHFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	238	1	1	0	0	100
Total	N/A	N/A	238	226	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  A  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6684   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGCCGCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.0% (226/238)  IGHV4-59*01  49   .......................C.......G.T........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6684   91   TGGATTGGTTATATCTATCACAGTGGGACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.0% (226/238)  IGHV4-59*01  139  ........G.........T.........G...............C.............................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  F  Y  D  S  S  G  Y  Y  H 
                    Query_6684   181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGTGGTCTTCTATGATAGCAGTGGTTATTACCAC  270
V  95.0% (226/238)  IGHV4-59*01  229  ...................GC..........................G..T.......--------------------------------  286
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                                  
D  95.5% (21/22)    IGHD3-22*01  7    -----------------------------------------------------------------.........T............---  28
J  95.6% (43/45)    IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_6684   271  TTTGACTATTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  313
J  95.6% (43/45)    IGHJ4*02     6    ........C.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_208535

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            244     7e-67
IGHD1-20*01                                                                                           18.0    0.63 
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD1-20*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	GAGACCGGATGTGGTGC	TAACTGGCACGA	AACGAGGTTACACGAAACGAGGTG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGTGAGAGACCGGATGTGGTGCTAACTGGCACGAAACGAGGTTACACGAAACGAGGTGACTGGTTCGACCCC	RVRDRMWC*LARNEVTRNEVTGSTP	242	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	29	26	2	1	89.7
CDR1-IMGT	29	52	24	15	9	0	62.5
FR2-IMGT	53	103	51	47	4	0	92.2
CDR2-IMGT	104	127	24	12	12	0	50
FR3-IMGT	128	241	114	99	15	0	86.8
CDR3-IMGT (germline)	242	249	8	6	2	0	75
Total	N/A	N/A	250	205	44	1	82


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L   N  S  P  V  *  A  L  D  S  P  L  L  T  I  T  *  A  G  S  A  R  L  R  G  R  D  W 
                    Query_6685   1    GGTCCCTGA-ACTCTCCTGTGTAGGCTCTGGACTCCCCTTTGCTGACCATTACATGAGCTGGGTCCGCCAGGCTCCGGGGAAGGGACTGG  89
V  82.0% (205/250)  IGHV3-7*03   47   .........G...........C..C.......T..A.....AG.AG.T...GG.......................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       S  G  W  P  K  F  R  P  V  D  L  M  R  T  M  R  N  L  *  G  A  D  S  P  S  P  E  T  T  P 
                    Query_6685   90   AGTGGGTGGCCCAAATTCCGCCCGGTGGACCTGATGCGTACTATGCGGAATCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  179
V  82.0% (205/250)  IGHV3-7*03   137  ...........A.C..AAA..AA.A....AG...GAAA.......T...C.......A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                       R  S  Q  F  I  C  K  W  T  A  *  E  P  T  T  Q  P  S  T  A  V  R  V  R  D  R  M  W  C  * 
                    Query_6685   180  AGAAGTCAGTTCATCTGCAAATGGACAGCCTGAGAGCCGACGACACAGCCCTCTACCGCTGTGCGTGTGAGAGACCGGATGTGGTGCTAA  269
V  82.0% (205/250)  IGHV3-7*03   227  ....C...C.GT...........A................G.....G...G.G..TTA.......A.A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD1-20*01  5    ---------------------------------------------------------------------------------------...  7

                                      -----CDR3-IMGT-------------------------------->                                  
                                       L  A  R  N  E  V  T  R  N  E  V  T  G  S  T  P  G  A  R  E  P  R  S  P  S  P  Q 
                    Query_6685   270  CTGGCACGAAACGAGGTTACACGAAACGAGGTGACTGGTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  350
D  91.7% (11/12)    IGHD1-20*01  8    ....A....------------------------------------------------------------------------  16
J  97.9% (47/48)    IGHJ5*02     4    ---------------------------------..............................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_223335

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            396     2e-112
IGHD3-10*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGAC	TGGTTCGGGGA	CTT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTGC	ARVTGSGTYSFDC	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	100	14	0	87.7
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	274	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  D  S  G  Y  T  F  G 
                    Query_6686   3    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGATTCTGGATACACCTTCGGC  92
V  92.9% (274/295)  IGHV1-8*02   1    .....G.................G..............................................C................AC.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  D  Y 
                    Query_6686   93   AGCTATGATATCAACTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAATCCTAACAGTGGGAACACAGACTAT  182
V  92.9% (274/295)  IGHV1-8*02   91   .................................................................C...........T.......G....  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  Y  M  E  L  S  S  L  G  S  A  D 
                    Query_6686   183  GCACAGAAGTTCCGGGGCAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCTACATGGAGCTGAGTAGTCTGGGATCTGCCGAC  272
V  92.9% (274/295)  IGHV1-8*02   181  .............A.......................A...C..C.T........................C..C...A......AG...  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       S  A  V  Y  C  C  A  R  V  T  G  S  G  T  Y  S  F  D  C  W  G  Q  G  P  L  V  P  V  S  S 
                    Query_6686   273  TCGGCCGTCTATTGCTGTGCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTGCTGGGGCCAGGGACCCCTGGTCCCCGTCTCCTCA  362
V  92.9% (274/295)  IGHV1-8*02   271  A.......G....A...........-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (11/11)   IGHD3-10*01  10   -----------------------------...........--------------------------------------------------  20
J  89.6% (43/48)    IGHJ4*02     1    -------------------------------------------...A......C.A.............A........A...........  47

                                       
                                       
                    Query_6686   363  G  363
J  89.6% (43/48)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_332140

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           349     3e-98
IGHD3-9*01                                                                                            37.2    1e-06
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAG	CCCTCCA	GTATTACGATATTTTGACT	CCCAAGGGGGTGC	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGCCCTCCAGTATTACGATATTTTGACTCCCAAGGGGGTGCGGTTCGACCCC	TRALQYYDILTPKGVRFDP	249	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	105	9	0	92.1
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	239	16	0	93.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  I  A  S  G  F  I  F  G  D  Y  E  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6687   1    GGTCCCTGAGACTCTCCTGTATAGCTTCTGGGTTCATCTTTGGTGATTATGAAATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.7% (239/255)  IGHV3-49*04  47   .....................C.........A....C..............CT.....................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  T  R  N  K  A  Y  G  G  T  T  E  Y  A  A  S  L  K  G  R  F  T  I  S  R  D  
                    Query_6687   91   AGTGGGTAGGTTTCACTAGAAACAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTCTGAAAGGCAGATTCACCATTTCAAGAGATG  180
V  93.7% (239/255)  IGHV3-49*04  137  ...............T.....G.....................................G...................C..........  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  N  S  I  V  Y  L  Q  M  N  S  L  K  A  E  D  T  A  V  Y  Y  C  T  R  A  L  Q  Y  Y  
                    Query_6687   181  ATTCCAACAGTATCGTCTATCTACAAATGAACAGCCTGAAGGCCGAGGACACAGCCGTGTACTACTGTACTAGAGCCCTCCAGTATTACG  270
V  93.7% (239/255)  IGHV3-49*04  227  .......A..C....C......G.................AA...................T.............---------------  301
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (19/19)   IGHD3-9*01   1    ----------------------------------------------------------------------------------........  8

                                      --CDR3-IMGT----------------------->                                  
                                      D  I  L  T  P  K  G  V  R  F  D  P  W  G  P  G  T  L  V  T  V  S  S  
                    Query_6687   271  ATATTTTGACTCCCAAGGGGGTGCGGTTCGACCCCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  339
D  100.0% (19/19)   IGHD3-9*01   9    ...........----------------------------------------------------------  19
J  97.8% (44/45)    IGHJ5*02     7    ------------------------..................A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_223337

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD2-15*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAGCGTT	AGGACATTGT	GTTAGAAGCACTTGCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGCGTTAGGACATTGTGTTAGAAGCACTTGCGACTACGGTATGGACGTC	ATALGHCVRSTCDYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	281	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_6688   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTA  90
V  97.9% (281/287)  IGHV5-51*01  6    ......................................................................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  H  P  G  D  S  D  T  R  Y  S  P
                    Query_6688   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCCATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  97.9% (281/287)  IGHV5-51*01  96   ..........................................................T............................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6688   181  GTCTTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (281/287)  IGHV5-51*01  186  ...C.........................................C....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  T  A  L  G  H  C  V  R  S  T  C  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T
                    Query_6688   271  CATGTATTACTGTGCGACAGCGTTAGGACATTGTGTTAGAAGCACTTGCGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCAC  360
V  97.9% (281/287)  IGHV5-51*01  276  .................-------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                           
D  90.0% (9/10)     IGHD2-15*01  1    ------------------------....T.....--------------------------------------------------------  10
J  100.0% (50/50)   IGHJ6*02     13   --------------------------------------------------........................................  52

                                                
                                        V  S  S 
                    Query_6688   361  CGTCTCCTCA  370
J  100.0% (50/50)   IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_337111

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           12.2    33   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCGG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGGAACTGGTTCGACCCC	ARGGWRRQRNWFDP	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	47	4	0	92.2
CDR2-IMGT	126	146	21	18	3	0	85.7
FR3-IMGT	147	260	114	101	13	0	88.6
CDR3-IMGT (germline)	261	268	8	7	1	0	87.5
Total	N/A	N/A	268	239	29	0	89.2


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  F  D  E  S  L  S  G  Y  Y  W  S  W  L  R  
                    Query_6689   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACTTGCGCTGTGTTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCC  90
V  89.2% (239/268)  IGHV4-34*01  26   ........T.......T....................C........C.A..G..G......C.................C...A.C....  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  S  H  S  G  S  T  R  Y  N  P  A  L  R  S  R  V  T  
                    Query_6689   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGGAAATCAGTCATAGTGGAAGTACGAGGTACAACCCGGCCCTCAGGAGTCGAGTCACCA  180
V  89.2% (239/268)  IGHV4-34*01  116  ................G......................A............C..C.AC.........T......A..............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      M  S  V  D  T  S  K  K  Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  I  Y  Y  C  A  R  G  
                    Query_6689   181  TGTCAGTAGACACGTCCAAGAAGCAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTATATATTACTGTGCGCGAGGGG  270
V  89.2% (239/268)  IGHV4-34*01  206  .A....................C..GT...........C..A......T...................G.G............A....--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------------------.  13

                                      -------CDR3-IMGT--------------->                                  
                                      G  W  R  R  Q  R  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6689   271  GCTGGCGAAGACAGCGGAACTGGTTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  336
D  100.0% (6/6)     IGHD6-19*01  14   .....-------------------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    -----------------.............................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_328589

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         352     3e-99
IGHD3-16*02                                                                                           25.7    0.003
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGCAGCC	TGGGGGAATTATCGTT	C	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGCAGCCTGGGGGAATTATCGTTCCTTTGACTAC	ARAAWGNYRSFDY	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	112	2	0	98.2
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	236	11	0	95.5


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  T  V  S  D  G  S  I  S  G  G  G  F  Y  W  S  W  L  R  Q  P  P  G  K  G  
                    Query_6690     4    CCCTGAGACTCTCCTGCACTGTCTCTGATGGCTCCATCAGCGGTGGTGGTTTCTACTGGAGTTGGCTCCGCCAGCCCCCAGGGAAGGGCC  93
V  95.5% (236/247)  IGHV4-30-4*01  50   .....TCC...A...............G.............A......A..A.............A........................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_6690     94   TGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCA  183
V  95.5% (236/247)  IGHV4-30-4*01  140  ..........................................................................................  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                        K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  A  A  W  G  N  Y  R  
                    Query_6690     184  AGAACCACTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTTCTGTGCCAGGGCAGCCTGGGGGAATTATCGTT  273
V  95.5% (236/247)  IGHV4-30-4*01  230  .......G.................................................A.........-----------------------  296
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  93.8% (15/16)    IGHD3-16*02    17   --------------------------------------------------------------------------.......G........  32

                                        ---------->                                  
                                        S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6690     274  CCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (44/44)   IGHJ4*02       5    -............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_59022

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           318     5e-89
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGG	AGCAGCAGCTGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGGAGCAGCAGCTGGTTGACTAC	ARDLEQQLVDY	234	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	11	1	0	91.7
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	119	24	17	4	3	70.8
FR3-IMGT	120	233	114	111	3	0	97.4
CDR3-IMGT (germline)	234	241	8	8	0	0	100
Total	N/A	N/A	233	220	10	3	94.4


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 
                    Query_6691   12   TGTGCAGCCTCAGGATTCACCTTCAGTAGTTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATT  101
V  94.4% (220/233)  IGHV3-21*01  64   ...........T.................C.....C......................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  T  T  T     Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  V  Y  L 
                    Query_6691   102  AGCACTACTACT---TACATATACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCAGTGTATTTG  188
V  94.4% (220/233)  IGHV3-21*01  154  ..T.G..G..G.AGT..............A...................................................C.....C..  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-----------CDR3-IMGT----------->            
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  E  Q  Q  L  V  D  Y  W  G  Q  G 
                    Query_6691   189  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGGAGCAGCAGCTGGTTGACTACTGGGGCCAGGGA  278
V  94.4% (220/233)  IGHV3-21*01  244  .....................................................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (12/12)   IGHD6-13*01  7    ----------------------------------------------------------............--------------------  18
J  100.0% (42/42)   IGHJ4*02     7    ----------------------------------------------------------------------....................  26

                                                            
                                       T  L  V  T  V  S  S  
                    Query_6691   279  ACCCTGGTCACCGTCTCCTCAG  300
J  100.0% (42/42)   IGHJ4*02     27   ......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_83240

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-20*01                                                                                           347     7e-98
IGHD3-10*01                                                                                           10.3    116  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-20*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TGAGGTC	GAGTT	C	GCTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATGAGGTCGAGTTCGCTCTTGATATC	ARDEVEFALDI	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  S  S  G  F  T  F  S  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6692   1    GGTCCCTGAGACTCTCCTGTGCAAGCTCCGGATTCACCTTTAGCGATTATGGCATGAGTTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-20*01  47   .......................GC...T............GAT..............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  N  G  V  N  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6692   91   AGTGGGTCTCTGGTATTAATTGGAATGGAGTTAATACAGGTTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-20*01  137  ............................T.G..GC.......................................................  226
                                      E  W  V  S  G  I  N  W  N  G  G  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  T  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  E  V  E  F  A  L  
                    Query_6692   181  AGAACTCCCTGTATCTGCAAATGACCAGTCTGAGAGCCGAGGACACGGCCTTGTATTACTGTGCGAGGGATGAGGTCGAGTTCGCTCTTG  270
V  94.4% (236/250)  IGHV3-20*01  227  ........................A...............................C..........A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  19   -----------------------------------------------------------------------------.....--------  23
J  93.3% (42/45)    IGHJ3*02     5    -----------------------------------------------------------------------------------...T...  11

                                      ---->                                 
                                      D  I  W  G  Q  G  T  K  V  T  V  S  S 
                    Query_6692   271  ATATCTGGGGCCAAGGGACAAAGGTCACCGTCTCCTCA  308
J  93.3% (42/45)    IGHJ3*02     12   .....................T............T...  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_243743

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD3-3*01                                                                                            12.2    30   
IGHJ3*01                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCT	TTACGA	GGGGCTAACTTTTCCTT	TCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCTTTACGAGGGGCTAACTTTTCCTTTC	ARDLYEGLTFPF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6693   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTTCTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  91.0% (223/245)  IGHV4-59*01  49   ..........................................AG.....A........................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  N  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  N  S 
                    Query_6693   91   TGGCTAGGATATATCAATTACACTGGGAGTACCAACTACAATCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAACAGC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A.T..G......T......G......C...........C..................G.........................G.A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  E  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  Y  E  G  L  T  F  P 
                    Query_6693   181  CAATTCTCCCTGGAGTTGTCTTCTGTGACCGCTGCGGACACGGCCGTGTACTATTGTGCGAGAGACCTTTACGAGGGGCTAACTTTTCCT  270
V  91.0% (223/245)  IGHV4-59*01  229  ..G.........A..C..AGC.............................T..C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-3*01   4    --------------------------------------------------------------------......----------------  9

                                      -->                                  
                                       F  W  G  P  G  T  M  V  T  V  S  S  
                    Query_6693   271  TTCTGGGGCCCAGGGACAATGGTCACCGTCTCCTCAG  307
J  94.4% (34/36)    IGHJ3*01     15   -.........A.....................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_291997

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           288     5e-80
IGHD3-10*01                                                                                           31.5    6e-05
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGGGGA	TATTATTATGGGTCGGGGAGTT	TCAATCCCGTGCCATTGGG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGGGGATATTATTATGGGTCGGGGAGTTTCAATCCCGTGCCATTGGGCGGTATGGACGTC	AKDRGYYYGSGSFNPVPLGGMDV	237	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	21	23	3	3	0	0	100
CDR1-IMGT	24	47	24	20	4	0	83.3
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	19	5	0	79.2
FR3-IMGT	123	236	114	105	9	0	92.1
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	224	204	20	0	91.1


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  D  G  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  F  I  S  Y  D 
                    Query_6694   21   TCTGGATTCACGTTCGATGGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCGTTTATCTCATATGAT  110
V  91.1% (204/224)  IGHV3-30*18  73   ...........C...AG.A.......................................................AG....A.........  162
                                       S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  R  L  K  Y  Y  I  D  S  V  R  G  R  F  T  M  S  R  D  N  S  K  N  T  L  N  L  Q  M  N 
                    Query_6694   111  GGAAGACTGAAATACTATATAGACTCCGTGAGGGGCCGATTCACCATGTCCAGAGACAATTCCAAGAACACTCTGAATCTGCAAATGAAC  200
V  91.1% (204/224)  IGHV3-30*18  163  .....TAAT.........GC...........A...............C.......................G...T..............  252
                                       G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><-----------------------------CDR3-IMGT---------------
                                       S  L  R  A  A  D  T  A  L  Y  Y  C  A  K  D  R  G  Y  Y  Y  G  S  G  S  F  N  P  V  P  L 
                    Query_6694   201  AGCCTGAGAGCTGCGGACACGGCTCTATATTACTGTGCGAAAGATCGGGGATATTATTATGGGTCGGGGAGTTTCAATCCCGTGCCATTG  290
V  91.1% (204/224)  IGHV3-30*18  253  .............A..........G.G.................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  90.9% (20/22)    IGHD3-10*01  2    ---------------------------------------------------.....C.....T..........-----------------  23

                                      -------------->                                 
                                       G  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6694   291  GGCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  338
J  100.0% (46/46)   IGHJ6*02     17   --..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_292529

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGTGG	AGCAATGGCTGG	GGAACATACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGTGGAGCAATGGCTGGGGAACATACTATAATTACGGCATGGACGCC	ARGHRWSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	44	6	0	88
CDR1-IMGT	51	80	30	21	3	6	70
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	16	5	0	76.2
FR3-IMGT	153	266	114	107	7	0	93.9
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	241	27	6	88


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  P  F  T  D  S  G  Y  Y  W  N  W  
                    Query_6695   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACTTGCGCTGTGTACGGTGGGCCCTTCACTGACAGTGGTTATTATTGGAACTGGT  90
V  88.0% (241/274)  IGHV4-34*01  26   ........T.......T............T.......C........C..T......T......------.......C..C....G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  
                    Query_6695   91   GCCGCCAGCCACCAGGGAAGGGCTTGGAGTGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAACCCGTCCCTCCAGAGTCGAG  180
V  88.0% (241/274)  IGHV4-34*01  110  T.........C...........GC..................T..A....AG.....G......................A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  I  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_6695   181  TCACCATATCAATAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTATATTATTGTGCGA  270
V  88.0% (241/274)  IGHV4-34*01  200  ...........G...............................GC............C..................G.....C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  W  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_6695   271  GAGGCCACCGGTGGAGCAATGGCTGGGGAACATACTATAATTACGGCATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.0% (241/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_59020

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           347     7e-98
IGHD3-3*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CAAA	ATTGCGGTTTTTGGAACGGTTATTA	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAATTGCGGTTTTTGGAACGGTTATTAACTACTACGGTATGGACGTC	AKIAVFGTVINYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	233	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  D  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6696   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCCGGATTCACCTTCAGTAGTCATGATATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.5% (233/244)  IGHV3-48*03  47   ......................A.....T..................T....A.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  T  
                    Query_6696   91   AGTGGGTTTCATTCATTAGTAGTAGTGGCAGCACCATATACTACGCAGACTCTGTGAAGGGCCGATTCAGCATCTCCAGAGACAACACCA  180
V  95.5% (233/244)  IGHV3-48*03  137  ............A...............T..T.....................................C................G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  K  S  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  I  A  V  F  G  T  V  
                    Query_6696   181  AGAAGTCACTGTATCTGCAAATGAGCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCCAAAATTGCGGTTTTTGGAACGGTTA  270
V  95.5% (233/244)  IGHV3-48*03  227  ....C...................A.......................................--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  84.0% (21/25)    IGHD3-3*01   3    --------------------------------------------------------------------...A..A........GT.....  24

                                      GT-------------------->                                 
                                      I  N  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6696   271  TTAACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
D  84.0% (21/25)    IGHD3-3*01   25   ...-----------------------------------------------------  27
J  100.0% (53/53)   IGHJ6*02     10   ---.....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_228453

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           353     1e-99
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAT	TTACTTGGATAGCAGTGGT	AATCCTCAGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAATTTACTTGGATAGCAGTGGTAATCCTCAGGACGGTATGGACGTC	AREIYLDSSGNPQDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6697   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-21*01  47   .....................................C......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  N  D  N  A  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6697   91   AGTGGGTCTCATCCATTAGTAATGATAATGCTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-21*01  137  .....................G.AG..G.AG...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  R  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  I  Y  L  D  S  S  
                    Query_6697   181  AGAACTCACTGTATCTGCGAATGAACAGCCTGAGAGCCGACGACACGGCTGTTTATTACTGTGCGAGAGAAATTTACTTGGATAGCAGTG  270
V  95.2% (238/250)  IGHV3-21*01  227  ..................A.....................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.2% (16/19)    IGHD3-22*01  4    -------------------------------------------------------------------------.....AT.....T....  20

                                      IMGT--------------------->                                 
                                      G  N  P  Q  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6697   271  GTAATCCTCAGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  84.2% (16/19)    IGHD3-22*01  21   ..---------------------------------------------------------  22
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_292525

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           410     1e-116
IGHD2-2*01                                                                                            10.3    135   
IGHJ3*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTGAAGTCTTT	TACCA	CCGAG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATATC	ASLKSFTTEDAFDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	275	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  T  S
                    Query_6698   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATTCGACTTTACCACCTC  90
V  95.5% (275/288)  IGHV5-51*01  6    ..........................................................................A.AG........G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_6698   91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAATGGATGGGGGTCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  95.5% (275/288)  IGHV5-51*01  96   C.........................................G.........A............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  S  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_6698   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACAGTGCCTACCTGCAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (275/288)  IGHV5-51*01  186  ............................................G..CC...............A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  S  L  K  S  F  T  T  E  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6698   271  CATGTATTACTGTGCGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  359
V  95.5% (275/288)  IGHV5-51*01  276  ..................-----------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                          
D  100.0% (5/5)     IGHD2-2*01   16   ------------------------------.....------------------------------------------------------  20
J  100.0% (49/49)   IGHJ3*02     2    ----------------------------------------.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_292527

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            346     2e-97
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	CCC	TTGGAGTGGTTCTTATA	GCGGTATAATAACCAGGGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGCCCTTGGAGTGGTTCTTATAGCGGTATAATAACCAGGGGTGCTTTTCATATT	VSPWSGSYSGIITRGAFHI	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	245	5	4	1	0	80
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  G  V  S  G  G  S  I  S  N  S  Y  W  W  S  W  V  R  Q  P  P  G  K  G  P 
                    Query_6699  1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGTGGCTCCATCAGCAATAGTTATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCCG  90
V  95.1% (233/245)  IGHV4-4*02  49   ...................C.......................G....A.C.....................................T.  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  V  Y  H  S  G  S  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_6699  91   GAGTGGATTGGGGAAGTCTATCATAGTGGGAGCACCAATTACAACCGGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  95.1% (233/245)  IGHV4-4*02  139  ...............A......................C.......C...........................................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                      N  H  S  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  V  S  P  W  S  G  S  Y  S  G 
                    Query_6699  181  AACCACTCCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGTGAGCCCTTGGAGTGGTTCTTATAGCGGT  270
V  95.1% (233/245)  IGHV4-4*02  229  .....G.T..............G......................................C...-------------------------  293
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  94.1% (16/17)    IGHD3-3*01  13   --------------------------------------------------------------------...........A.....-----  29

                                     MGT----------------------->                                  
                                      I  I  T  R  G  A  F  H  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6699  271  ATAATAACCAGGGGTGCTTTTCATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  331
J  95.7% (45/47)    IGHJ3*02    4    --------------.......G....C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_292526

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           411     5e-117
IGHD1-20*01                                                                                           29.5    2e-04 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-20*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGAAAA	TATAACTGGAACGAC	GGAAT	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATC	ARVGKYNWNDGIAFDI	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	279	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N 
                    Query_6700   3    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAAC  92
V  94.6% (279/295)  IGHV1-69*01  1    ...G...................G.......................C........................................G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  F  A  V  N  W  V  R  Q  A  P  G  H  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  K  Y 
                    Query_6700   93   AGCTTTGCTGTCAACTGGGTGCGACAGGCCCCTGGACATGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAACAAAATAC  182
V  94.6% (279/295)  IGHV1-69*01  91   ....A....A...G........................A..........................................G....C...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  V  Y  M  E  R  G  S  L  R  S  E  D 
                    Query_6700   183  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGGACAGTCTACATGGAGCGGGGCAGCCTGAGATCTGAGGAC  272
V  94.6% (279/295)  IGHV1-69*01  181  ..................................................C....C...........T.A....................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  V  G  K  Y  N  W  N  D  G  I  A  F  D  I  W  G  Q  G  T  I  V  T 
                    Query_6700   273  ACGGCCGTTTATTATTGTGCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATCTGGGGCCAAGGGACAATAGTCACC  362
V  94.6% (279/295)  IGHV1-69*01  271  ........G.....C..........-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (15/15)   IGHD1-20*01  3    ---------------------------------...............------------------------------------------  17
J  95.7% (45/47)    IGHJ3*02     4    -----------------------------------------------------...T..........................G......  40

                                                
                                       V  S  S  
                    Query_6700   363  GTCTCTTCAG  372
J  95.7% (45/47)    IGHJ3*02     41   ..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_292521

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           274     8e-76
IGHD2-2*01                                                                                            18.0    0.59 
IGHJ6*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACAAACTGC	GACTATCAA	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACAAACTGCGACTATCAAATGGACGTC	ARVDCSSTNCDYQMDV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	209	34	0	86


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  V  S  I  N  D  D  F  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_6701   4    CCCTGAGACTCTCCTGTACTGTCTCTGGGGTCTCCATCAATGATGACTTCTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGGCTGGAGT  93
V  86.0% (209/243)  IGHV4-59*01  50   .....TCC...A....C...........T.G........G.AG.T...A........................A........A.......  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  V  G  Y  I  N  Y  R  G  S  T  K  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  N  N  
                    Query_6701   94   GGGTTGGATATATCAATTATAGAGGCAGTACTAAGTACAACCCATCCCTCAAGGGTCGGGTCACCATATCAGTAGACACGTCCAACAATG  183
V  86.0% (209/243)  IGHV4-59*01  140  ..A....G......T....C..T..G..C..C..C........C.........A....A..........................G..CC  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      E  F  S  L  K  R  S  S  V  T  V  A  D  T  A  V  Y  Y  W  A  R  V  D  C  S  S  T  N  C  D  
                    Query_6701   184  AGTTCTCCCTGAAGCGGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGGGCGAGAGTGGACTGTAGTAGCACAAACTGCGACT  273
V  86.0% (209/243)  IGHV4-59*01  230  ...............T..............CT..............G........T.......---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  83.3% (15/18)    IGHD2-2*01   8    --------------------------------------------------------------------........T..C.G....----  25

                                      ------------->                                 
                                      Y  Q  M  D  V  W  G  R  G  T  K  V  F  V  S  S 
                    Query_6701   274  ATCAAATGGACGTCTGGGGCCGAGGGACCAAGGTCTTCGTCTCCTCA  320
J  90.5% (38/42)    IGHJ6*02     21   -----................A........C....AC..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_292520

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           318     6e-89
IGHD2-2*02                                                                                            35.3    4e-06
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-2*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCCAA	ATATTGTACTACCACCAGCTGCTATAC	AC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCCAAATATTGTACTACCACCAGCTGCTATACACATGCTTTTGAAAAC	ARDPKYCTTTSCYTHAFEN	235	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	18	21	4	4	0	0	100
CDR1-IMGT	22	45	24	23	1	0	95.8
FR2-IMGT	46	96	51	49	2	0	96.1
CDR2-IMGT	97	120	24	22	2	0	91.7
FR3-IMGT	121	234	114	108	6	0	94.7
CDR3-IMGT (germline)	235	242	8	8	0	0	100
Total	N/A	N/A	225	214	11	0	95.1


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  T  A  I  W  A  D
                    Query_6702   18   GTCTGGATTCACCTTCAGTCGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGACAGCTATATGGGCTGA  107
V  95.1% (214/225)  IGHV3-33*01  72   ...................A.....................................................G...T.......TA...  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  G  D  S  V  R  G  R  F  T  I  S  R  D  N  S  K  D  T  L  Y  L  Q  M  D
                    Query_6702   108  TGGAAGTAATAAATACTATGGAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCAAGGACACACTGTATCTACAAATGGA  197
V  95.1% (214/225)  IGHV3-33*01  162  ....................C...........A..................................A....G........G......A.  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------------CDR3-IMGT--------------------
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  K  Y  C  T  T  T  S  C  Y  T  H  A  F  E
                    Query_6702   198  CAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGACCCCAAATATTGTACTACCACCAGCTGCTATACACATGCTTTTGA  287
V  95.1% (214/225)  IGHV3-33*01  252  .............................................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  88.9% (24/27)    IGHD2-2*02   4    ---------------------------------------------------........G..GT..............------------  30
J  91.7% (44/48)    IGHJ3*02     3    --------------------------------------------------------------------------------..........  12

                                      --->                                  
                                        N  W  G  Q  G  T  V  V  I  V  S  S  
                    Query_6702   288  AAACTGGGGCCAAGGGACAGTGGTCATCGTCTCTTCAG  325
J  91.7% (44/48)    IGHJ3*02     13   T.T................A......C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_292522

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD3-3*01                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTCCTG	TACGATTTTTGGAATGGT	CAGCAGTACTTTTTCAAGGGTTTA	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCTGTACGATTTTTGGAATGGTCAGCAGTACTTTTTCAAGGGTTTAGACGTC	ARVLYDFWNGQQYFFKGLDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  R  F  A  N  S
                    Query_6703   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGGTTTGCCAACTC  90
V  93.1% (269/289)  IGHV5-51*01  6    ..................................................A...........................C...A...G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  G  P
                    Query_6703   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGAAAAGGCCTGGAGTGGATGGGCGTCATCTACCCTGGCGACTCTGATACCAGATACGGCCC  180
V  93.1% (269/289)  IGHV5-51*01  96   ........G.....................G....................GA.......T.....T..................A....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  G  L  R  A  S  D  T  A
                    Query_6703   181  GTCCTTCCAGGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTATCTTCACTGGAGCGGCCTGAGGGCCTCGGACACCGC  270
V  93.1% (269/289)  IGHV5-51*01  186  .........A..................................G.........C..G..G......A......A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  F  C  A  R  V  L  Y  D  F  W  N  G  Q  Q  Y  F  F  K  G  L  D  V  W  G  Q  G  T  S
                    Query_6703   271  CATGTATTTCTGTGCGAGAGTCCTGTACGATTTTTGGAATGGTCAGCAGTACTTTTTCAAGGGTTTAGACGTCTGGGGCCAAGGGACTTC  360
V  93.1% (269/289)  IGHV5-51*01  276  ........A..........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  94.4% (17/18)    IGHD3-3*01   5    -------------------------.............G....-----------------------------------------------  22
J  94.9% (37/39)    IGHJ6*02     24   -------------------------------------------------------------------....................CA.  46

                                                      
                                        V  T  V  S  S 
                    Query_6703   361  GGTCACCGTCTCCTCA  376
J  94.9% (37/39)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_81459

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           388     5e-110
IGHD4-17*01                                                                                           18.0    0.68  
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGG	CTACGGTGA	GTCCGAGTAGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTCTGGACGTC	ARDLATVSPSSFYYGLDV	291	344	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	9	77	69	67	2	0	97.1
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	45	6	0	88.2
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	104	10	0	91.2
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  T  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_6704   9    CAGCTGGTGCAGTCTGGAACTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAT  98
V  92.8% (269/290)  IGHV1-18*01  7    ..................G....G.............................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  K  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_6704   99   GGTATTACCTGGGTGCGGCAGGCCCCTGGACAGGGACTTAAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  188
V  92.8% (269/290)  IGHV1-18*01  97   .....C.G.........A..............A..G...G.........................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  L  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  V  D  D  T  A 
                    Query_6704   189  ATGGTCCGGGACAGAGTCACCTTGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGAGTTGACGACACGGCC  278
V  92.8% (269/290)  IGHV1-18*01  187  .A.C...A..G..........A......C....................C..........C..............TC.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  S  F  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T 
                    Query_6704   279  GTGTATTACTGTGCGAGAGATCTGGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACC  368
V  92.8% (269/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------.........--------------------------------------------------------  12
J  98.1% (51/52)    IGHJ6*02     11   -----------------------------------------------..........A................................  53

                                               
                                       V  S  S 
                    Query_6704   369  GTCTCCTCA  377
J  98.1% (51/52)    IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_243747

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         318     6e-89
IGHD3-9*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTGCAGATCACC	ATATTTTGACTGGTTA	CTTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCTGCAGATCACCATATTTTGACTGGTTACTTTACTAC	ASCRSPYFDWLLYY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  S  A  V  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6705     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCCTTCAGCAGCTCTGCTGTGCACTGGGTCCGCCAGGCTCCGGGCAAGGGCCTGG  90
V  91.1% (225/247)  IGHV3-30-3*01  47   ...................................A.......T....A....A......................A........G....  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  I  I  S  H  D  G  N  E  K  Y  Y  T  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_6705     91   AGTGGGTGGCAATCATTTCACATGATGGAAACGAAAAGTACTACACAGATTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  91.1% (225/247)  IGHV3-30-3*01  137  ...........G.T..A...T.........G.A.T..A......G....C.......A................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                        N  N  T  L  Y  V  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  S  C  R  S  P  Y  F  D  
                    Query_6705     181  ACAATACGCTGTATGTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTACTTCTGTGCGAGCTGCAGATCACCATATTTTGACT  270
V  91.1% (225/247)  IGHV3-30-3*01  227  .G..C.........C........................................T.A.........-----------------------  293
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (16/16)   IGHD3-9*01     9    -------------------------------------------------------------------------------...........  19

                                        ------------->                                  
                                        W  L  L  Y  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_6705     271  GGTTACTTTACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
D  100.0% (16/16)   IGHD3-9*01     20   .....-------------------------------------------  24
J  97.4% (38/39)    IGHJ4*02       10   ---------..................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_243746

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           428     3e-122
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ACCCTCGG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTCGGTGCTCTTGATATC	ARTLGALDI	280	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	66	63	63	0	0	100
CDR1-IMGT	67	90	24	24	0	0	100
FR2-IMGT	91	141	51	50	1	0	98
CDR2-IMGT	142	165	24	23	1	0	95.8
FR3-IMGT	166	279	114	112	2	0	98.2
CDR3-IMGT (germline)	280	285	6	6	0	0	100
Total	N/A	N/A	282	278	4	0	98.6


Alignments

                                      <--------------------------FR1-IMGT---------------------------><-------CDR1-IMGT------><--
                                       V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y  G  I 
                    Query_6706   4    GTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTATGGTATC  93
V  98.6% (278/282)  IGHV1-18*01  13   ..........................................................................................  102
                                       V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y  G  I 

                                      ------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------------
                                       S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q  K  F 
                    Query_6706   94   AGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAATTATGCACAGAAGTTC  183
V  98.6% (278/282)  IGHV1-18*01  103  .............................G.........................C..................C............C..  192
                                       S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q  K  L 

                                      -----------------------------------FR3-IMGT-----------------------------------------------
                                       Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A  V  Y 
                    Query_6706   184  CAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCGTGTAT  273
V  98.6% (278/282)  IGHV1-18*01  193  ..........................................................................................  282
                                       Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A  V  Y 

                                      -----><--------CDR3-IMGT-------->                                  
                                       Y  C  A  R  T  L  G  A  L  D  I  W  G  Q  G  A  M  V  T  V  S  S  
                    Query_6706   274  TACTGTGCGAGAACCCTCGGTGCTCTTGATATCTGGGGCCAAGGGGCAATGGTCACCGTCTCTTCAG  340
V  98.6% (278/282)  IGHV1-18*01  283  ............-------------------------------------------------------  294
                                       Y  C  A  R                                                        
J  95.7% (45/47)    IGHJ3*02     4    --------------------....T....................A.....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_236544

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           336     1e-94
IGHD3-3*01                                                                                            10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATC	GAGTG	CCCTTCCAATTTG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCGAGTGCCCTTCCAATTTGACGGTGTGGACGTC	ARNRVPFQFDGVDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6707   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTTCTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.2% (229/243)  IGHV4-59*08  49   .......................................A..AG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  N  G  Y  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_6707   91   TGGATTGGCTATATGTATTACAATGGGTACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGTCCAAGAAC  180
V  94.2% (229/243)  IGHV4-59*08  139  ........G.....C.......G....AG.......................................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       L  F  S  L  M  L  T  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  N  R  V  P  F  Q  F  D  G 
                    Query_6707   181  CTGTTCTCCCTGATGCTGACCTCTGTGACCTCCGCAGACACGGCCGTGTATTACTGTGCGAGAAATCGAGTGCCCTTCCAATTTGACGGT  270
V  94.2% (229/243)  IGHV4-59*08  229  .A...........A.....G..........G................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-3*01   16   -------------------------------------------------------------------.....------------------  20
J  93.6% (44/47)    IGHJ6*02     16   -------------------------------------------------------------------------------------.....  20

                                      -------->                                 
                                       V  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_6707   271  GTGGACGTCTGGGGCCAAGGGACGACGGTCAGCGTCTCCTCA  312
J  93.6% (44/47)    IGHJ6*02     21   A......................C.......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_236547

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           305     3e-85
IGHD3-16*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	GGTGGAAATTA	TTTGGGG	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGTGGAAATTATTTGGGGGGTATGGACGTC	AGGNYLGGMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	220	25	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  Y  Y  T  M  Y  W  V  R  Q  V  P  G  R  G  L  
                    Query_6708   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTTGATTATTATACCATGTACTGGGTCCGTCAAGTTCCGGGGAGGGGTCTGG  90
V  89.8% (220/245)  IGHV3-43*01  47   .....................................C......G...........C...............C........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  I  S  W  D  G  E  T  T  D  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  T  G  
                    Query_6708   91   AGTGGGTCTCTCTTATTAGTTGGGATGGTGAGACTACGGACTATGGAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACACCGGCA  180
V  89.8% (220/245)  IGHV3-43*01  137  ..............................GT.GC..AT......C.................................A....A.A...  226
                                      E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  R  S  L  F  L  Q  M  N  S  L  I  S  E  D  T  A  L  Y  F  C  A  G  G  N  Y  L  G  G  M  
                    Query_6708   181  AAAGGTCCCTCTTTCTGCAGATGAACAGTCTGATAAGTGAAGACACCGCCTTATATTTCTGTGCAGGTGGAAATTATTTGGGGGGTATGG  270
V  89.8% (220/245)  IGHV3-43*01  227  ...AC.....G.A......A.............G..C...G...........G....A.......-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  15   ----------------------------------------------------------------------------.......-------  21
J  95.6% (43/45)    IGHJ6*02     18   -----------------------------------------------------------------------------------.......  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_6708   271  ACGTCTGGGGCCAAGGGACAATGGTCACCGTCTCCTCA  308
J  95.6% (43/45)    IGHJ6*02     25   ...................C.C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_236546

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGCCCCC	ARDPTGSGYNFGSNWFAP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_6709   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_6709   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_6709   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  A  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_6709   271  GGTTCTAACTGGTTCGCCCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  95.9% (47/49)    IGHJ5*02     3    ------..........A................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_216600

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           325     3e-91
IGHD3-22*01                                                                                           21.8    0.041
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCGTAAAGGG	GGTTATTACTA	T	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCGTAAAGGGGGTTATTACTATCTACTACTACTACAATATGGACGTC	ARTVKGVITIYYYYNMDV	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_6710   4    CCCTGAGACTCTCCTGTGCCGTCTATGGTGGGTCTTTCAGTGGTTACTACTGGACTTGGATCCGCCAACCCCCAGGGAAGGGGCTGGAGT  93
V  93.0% (225/242)  IGHV4-34*01  50   .....TCC...A....C..T..............C...................GC...........G......................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  L  S  G  R  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N  
                    Query_6710   94   GGATTGGCGAAATCAATCTTAGTGGAAGAACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAATC  183
V  93.0% (225/242)  IGHV4-34*01  140  .......G..........A.........C..........................................G................C.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  I  Y  
                    Query_6710   184  AGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAACCGTAAAGGGGGTTATTACTATCTACT  273
V  93.0% (225/242)  IGHV4-34*01  230  ............A.................................G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (11/11)   IGHD3-22*01  20   -------------------------------------------------------------------------...........------  30
J  96.6% (56/58)    IGHJ6*02     5    -------------------------------------------------------------------------------------.....  9

                                      ------------------->                                 
                                      Y  Y  Y  N  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6710   274  ACTACTACAATATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  96.6% (56/58)    IGHJ6*02     10   ........GG...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_236540

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           338     5e-95
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	230	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_6711   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.3% (230/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_6711   91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCC  180
V  94.3% (230/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C.................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_6711   181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  94.3% (230/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6711   271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_236543

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6712   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ........................................G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_6712   91   TGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ........G...A..T...............................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y 
                    Query_6712   181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............C....C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6712   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_236542

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            21.8    0.041
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGACACCTCGAGA	TTTGGAGTGGT	CAA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACACCTCGAGATTTGGAGTGGTCAAGATGCTTTTGATACC	ARHLEIWSGQDAFDT	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6713   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCATCTTTAGCAACTACGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (228/245)  IGHV3-23*01  47   ....................G...............C........G...T.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  F  G  V  R  G  V  A  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6713   91   AGTGGGTCTCAACTTTTGGTGTTAGAGGTGTTGCCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (228/245)  IGHV3-23*01  137  ...........G..A..A...G...T....G.AG........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  H  L  E  I  W  S  G  
                    Query_6713   181  AGAACACCCTTTATCTGCAAATGCACAGCCTGAGAGCCGAGGACACGGCCGTATATTATTGTGCGCGACACCTCGAGATTTGGAGTGGTC  270
V  93.1% (228/245)  IGHV3-23*01  227  .......G..G............A..................................C......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD3-3*01   12   ------------------------------------------------------------------------------...........-  22

                                      ---------------->                                  
                                      Q  D  A  F  D  T  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6713   271  AAGATGCTTTTGATACCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  98.0% (48/49)    IGHJ3*02     2    --.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_236549

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           408     4e-116
IGHD2-21*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	ATTTTGGTGG	ATAGAGATAGAGTTCC	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTC	ARGGFWWIEIEFRMDV	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	73	2	0	97.3
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	106	8	0	93
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	278	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_6714   2    CAGGTGCAGCTGGTGCAATCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACC  91
V  94.2% (278/295)  IGHV1-18*01  1    .....T...........G.................................................................C......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  W  I  S  A  Y  T  G  N  T  K  N 
                    Query_6714   92   GACTATGGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGATGGATCAGCGCTTACACTGGTAATACAAAAAAT  181
V  94.2% (278/295)  IGHV1-18*01  91   AG...........G.....................................A.....................A......C.....CT..  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  V  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_6714   182  GCACAAAAAGTCCAGGGCAGAGTGACCATGACCACAGACACATCCACGAGAACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGAC  271
V  94.2% (278/295)  IGHV1-18*01  181  .....G..GC.............C..........................C...............C.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  G  G  F  W  W  I  E  I  E  F  R  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_6714   272  ACGGCCGTGTATTACTGTGCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTCTGGGGCCAAGGGACCACGGTCACC  361
V  94.2% (278/295)  IGHV1-18*01  271  .........................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  90.0% (9/10)     IGHD2-21*01  6    -----------------------------...G......---------------------------------------------------  15
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------------...................................  53

                                               
                                       V  S  S 
                    Query_6714   362  GTCTCCTCA  370
J  100.0% (44/44)   IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_236548

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            21.8    0.041
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGACACCTCGAGA	TTTGGAGTGGT	CAA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACACCTCGAGATTTGGAGTGGTCAAGATGCTTTTGATACC	ARHLEIWSGQDAFDT	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6715   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCATCTTTAGCAACTACGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (228/245)  IGHV3-23*01  47   ....................G...............C........G...T.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  F  G  V  R  G  V  A  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6715   91   AGTGGGTCTCAACTTTTGGTGTTAGAGGTGTTGCCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (228/245)  IGHV3-23*01  137  ...........G..A..A...G...T....G.AG........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  H  L  E  I  W  S  G  
                    Query_6715   181  AGAACACCCTTTATCTGCAAATGCACAGCCTGAGAGCCGAGGACACGGCCGTATATTATTGTGCGCGACACCTCGAGATTTGGAGTGGTC  270
V  93.1% (228/245)  IGHV3-23*01  227  .......G..G............A..................................C......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD3-3*01   12   ------------------------------------------------------------------------------...........-  22

                                      ---------------->                                  
                                      Q  D  A  F  D  T  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6715   271  AAGATGCTTTTGATACCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  98.0% (48/49)    IGHJ3*02     2    --.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_43461

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6716   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_6716   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_6716   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_6716   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_302649

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD3-10*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGGAT	GGGAGTTA	CGAA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATGGGAGTTACGAAACTTCGACTAC	ARGGWELRNFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_6717   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACAGCTTCACCAACTA  90
V  96.2% (278/289)  IGHV5-51*03  6    ....................C.............................................T..............T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  T  Y  S  P
                    Query_6717   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCACATACAGCCC  180
V  96.2% (278/289)  IGHV5-51*03  96   ............................................................................A...G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  M  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6717   181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACATGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (278/289)  IGHV5-51*03  186  ........A..........................A........G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  F  C  A  R  G  G  W  E  L  R  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6717   271  CATCTATTTCTGTGCGAGAGGGGGATGGGAGTTACGAAACTTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.2% (278/289)  IGHV5-51*03  276  ...G....A..........----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD3-10*01  17   --------------------------........-------------------------------------------------  24
J  97.8% (44/45)    IGHJ4*02     4    --------------------------------------....T........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_302647

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ3*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTCGCCAA	ATTACGATTTTTGGAATGGCTATTATA	TTACCAAAAAAGGA	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCGCCAAATTACGATTTTTGGAATGGCTATTATATTACCAAAAAAGGAGCTTTTGATGTC	ARESPNYDFWNGYYITKKGAFDV	240	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	229	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  I  S  S  S  N  I  N  W  V  R  Q  L  P  G  K  G  L  
                    Query_6718   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCATCAGTAGCAGCAACATAAACTGGGTCCGCCAGCTTCCCGGGAAGGGGCTGG  90
V  92.7% (229/247)  IGHV3-53*01  47   ......................................G.........A.T....G.G.............GC...A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  F  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  R  G  R  F  T  V  S  G  D  N  S  K  
                    Query_6718   91   AGTGGGTCTCATTTATTTATAGTGGTGGCAGCACATACTACGCAGACTCCGTGAGGGGCCGATTCACCGTCTCCGGAGACAATTCCAAGA  180
V  92.7% (229/247)  IGHV3-53*01  137  ...........G..........C.....T.........................A.............A.....A...............  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------------C
                                      N  T  L  Y  L  Q  M  E  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  E  S  P  N  Y  D  F  W  
                    Query_6718   181  ACACTCTGTATCTTCAAATGGAAAGCCTGAGACCCGAGGACACGGCCGTGTATTACTGTGCGAGAGAGTCGCCAAATTACGATTTTTGGA  270
V  92.7% (229/247)  IGHV3-53*01  227  ....G...............A.C.........G..................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  92.6% (25/27)    IGHD3-3*01   3    ---------------------------------------------------------------------------...............  17

                                      DR3-IMGT----------------------------->                                  
                                      N  G  Y  Y  I  T  K  K  G  A  F  D  V  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6718   271  ATGGCTATTATATTACCAAAAAAGGAGCTTTTGATGTCTGGGGCCAAGGGACATTGGTCACCGTCTCTTCAG  342
D  92.6% (25/27)    IGHD3-3*01   18   G...T.......------------------------------------------------------------  29
J  97.8% (45/46)    IGHJ3*01     5    --------------------------...........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_302643

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           300     9e-84
IGHD3-3*01                                                                                            12.2    34   
IGHJ3*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGGAGT	CTTGGACCTTGATGACGGTGCCATCCAACAGATCGGTGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGAGTCTTGGACCTTGATGACGGTGCCATCCAACAGATCGGTGTTTTTGATAAG	ARDGVLDLDDGAIQQIGVFDK	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  N  T  Y  G  M  Y  W  I  R  Q  A  P  G  K  G  L  
                    Query_6719   1    GGTCCCTGAGACTCTCCTGTGTAGCATCTGGATTCTCCTTCAATACTTATGGCATGTATTGGATTCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  88.4% (221/250)  IGHV3-33*01  47   .....................C...G.........A......G..GC.........C.C...G.C.........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  W  H  D  G  S  Q  K  F  Y  V  D  S  V  K  D  R  F  T  V  S  R  G  N  S  
                    Query_6719   91   AGTGGGTGGCATCTATATGGCATGATGGAAGTCAGAAATTCTATGTAGACTCTGTGAAGGACCGATTCACCGTCTCCAGAGGCAATTCCA  180
V  88.4% (221/250)  IGHV3-33*01  137  ...........GT.......T...........A.T....A.....C......C.......G..........A.........A........  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      R  N  T  L  Y  L  Q  M  N  I  V  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  V  L  D  L  D  
                    Query_6719   181  GGAACACATTGTATCTGCAAATGAACATAGTGAGAGCCGAAGACACGGCTGTATATTACTGTGCGAGAGATGGAGTCTTGGACCTTGATG  270
V  88.4% (221/250)  IGHV3-33*01  227  A......GC..................GCC..........G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-3*01   14   ----------------------------------------------------------------------......--------------  19

                                      DR3-IMGT-------------------------->                                  
                                      D  G  A  I  Q  Q  I  G  V  F  D  K  C  G  Q  G  T  L  V  T  V  S  S  
                    Query_6719   271  ACGGTGCCATCCAACAGATCGGTGTTTTTGATAAGTGTGGCCAAGGGACATTGGTCACCGTCTCTTCAG  339
J  90.9% (40/44)    IGHJ3*02     7    -------------------------........TC..G............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_302640

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            388     5e-110
IGHD6-19*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	N/A	CAGTGGCTGGT	TAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGCAGTGGCTGGTTAATTGACTAC	AHSSGWLIDY	263	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	110	4	0	96.5
CDR3-IMGT (germline)	263	270	8	8	0	0	100
Total	N/A	N/A	270	259	11	0	95.9


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  T  A  V  G  V  H  W  I  R
                    Query_6720   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTACTGCAGTGGGTGTACACTGGATCCG  90
V  95.9% (259/270)  IGHV2-5*01   30   .................................................................G..G.........GGG.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  L  Y  W  N  D  D  N  H  Y  S  P  S  L  K  S  R  L  T
                    Query_6720   91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCCTTTATTGGAATGATGATAACCACTACAGCCCATCTCTGAAGAGCAGGCTTAC  180
V  95.9% (259/270)  IGHV2-5*01   120  .....................................A...................G.G...........................C..  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        V  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  V  D  P  V  D  T  A  T  Y  Y  C  A  H  S
                    Query_6720   181  CGTCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACGTGGACCCTGTGGACACAGCCACATATTACTGTGCACACAG  270
V  95.9% (259/270)  IGHV2-5*01   210  .A...............................................A........................................  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                      ---CDR3-IMGT--------->                                  
                                        S  G  W  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6720   271  CAGTGGCTGGTTAATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  326
D  100.0% (11/11)   IGHD6-19*01  9    ...........---------------------------------------------  19
J  100.0% (42/42)   IGHJ4*02     7    --------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_343892

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         353     9e-100
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGTGGGGTGCGTTATGC	CAGCAGCTGGTAC	GG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTGGGGTGCGTTATGCCAGCAGCTGGTACGGCTAC	ARGGVRYASSWYGY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	236	10	0	95.9


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  L 
                    Query_6721     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCATCAGCAGTGGTTACTACTGGGGCTGGCTCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  95.9% (236/246)  IGHV4-38-2*01  49   ...............................................................A..........................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  T  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 
                    Query_6721     91   GAGTGGATTGGGACTATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACTATGTCAGTAGACACGTCCAAG  180
V  95.9% (236/246)  IGHV4-38-2*01  139  .............G.................G....................................C..A..................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  G  G  V  R  Y  A  S  S 
                    Query_6721     181  AACCACTTCTCCCTAAAGCTGAGCTCTGTGACGGCCGCTGACACGGCCGTGTTTTACTGTGCGAGAGGTGGGGTGCGTTATGCCAGCAGC  270
V  95.9% (236/246)  IGHV4-38-2*01  229  .....G........G.................C.....A.............A.............------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-13*01    9    -----------------------------------------------------------------------------------.......  15

                                        ----------->                                
                                         W  Y  G  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6721     271  TGGTACGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
D  100.0% (13/13)   IGHD6-13*01    16   ......--------------------------------------  21
J  100.0% (36/36)   IGHJ4*02       11   --------....................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_43483

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           300     8e-84
IGHD1-1*01                                                                                            10.3    117  
IGHJ3*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-1*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCCT	CTGGA	CCTCTTT	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCCTCTGGACCTCTTTCTTTTGATATC	ARDPSGPLSFDI	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	24	15	6	3	62.5
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	250	223	24	3	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  N  F  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6722   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTTAGCAATTTTGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.2% (223/250)  IGHV3-48*03  47   ....................G...................C..T.G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  F  I  D  N  Y  G     T  I  H  Y  L  E  S  V  R  G  R  F  T  V  S  R  D  N  A  
                    Query_6722   91   AGTGGCTTTCGTTCATTGATAATTATGGTA---CCATCCACTATCTAGAGTCTGTGAGGGGCCGATTCACCGTCTCCAGAGACAACGCCA  177
V  89.2% (223/250)  IGHV3-48*03  137  .....G....A.A....AG..G.AG.....GTA....AT....CGC...C.......A.............A..................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  Q  M  D  G  L  R  A  E  D  T  A  V  Y  F  C  A  R  D  P  S  G  P  L  S  
                    Query_6722   178  AGAACTCACTGTATCTGCAAATGGACGGCCTGAGAGCCGAGGACACGGCTGTTTATTTCTGTGCGAGAGACCCCTCTGGACCTCTTTCTT  267
V  89.2% (223/250)  IGHV3-48*03  227  .......................A..A..............................A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-1*01   8    ---------------------------------------------------------------------------.....----------  12
J  91.1% (41/45)    IGHJ3*02     6    ---------------------------------------------------------------------------------------...  8

                                      ------->                                  
                                      F  D  I  W  G  P  G  T  R  V  T  V  S  S  
                    Query_6722   268  TTGATATCTGGGGCCCGGGGACACGGGTCACCGTCTCTTCAG  309
J  91.1% (41/45)    IGHJ3*02     9    ...............AA......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_278969

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     6e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_6723   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_6723   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_6723   181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_6723   271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_278968

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           244     7e-67
IGHD3-16*01                                                                                           14.1    8.8  
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGGAGGGGGCTTCGGGACAGA	ATTATGA	CGGACGACGGGGGACTCTGTC	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGGAGGGGGCTTCGGGACAGAATTATGACGGACGACGGGGGACTCTGTCCGTC	ARLEGASGQNYDGRRGTLSV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	87	27	0	76.3
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	199	43	0	82.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  S  F  Y  W  G  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_6724   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCAATCAGTAGTTTTTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGCCTGGAG  90
V  82.2% (199/242)  IGHV4-59*08  49   ...............................G...C..........AC......A..........G...C.............A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  A  V  S  Y  R  G  S  T  S  S  N  P  S  L  R  G  R  V  T  L  F  V  G  P  S  N  N 
                    Query_6724   91   TGGGTTGGGGCCGTCTCTTATAGAGGGAGCACCTCCTCCAATCCGTCCCTCAGGGGTCGAGTCACCTTATTTGTGGGCCCGTCCAATAAT  180
V  82.2% (199/242)  IGHV4-59*08  139  ...A.....TATA...A...C..T.........AA..A...C..C.......A.A...........A...CA..A.A.A.......G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  V  S  L  E  V  R  S  V  T  A  A  D  S  A  I  Y  Y  C  A  R  L  E  G  A  S  G  Q  N  Y 
                    Query_6724   181  CAAGTTTCCCTGGAAGTGAGGTCTGTGACCGCCGCAGACAGCGCCATTTACTACTGTGCGAGGCTGGAGGGGGCTTCGGGACAGAATTAT  270
V  82.2% (199/242)  IGHV4-59*08  229  ..GT.C......A.GC....C...................CG...G.G..T...........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------------------------.....  7

                                      GT------------------------>                                 
                                       D  G  R  R  G  T  L  S  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6724   271  GACGGACGACGGGGGACTCTGTCCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
D  100.0% (7/7)     IGHD3-16*01  8    ..----------------------------------------------------------  9
J  100.0% (37/37)   IGHJ6*02     26   -----------------------.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_117676

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           338     5e-95
IGHD3-10*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCACTTCAA	GTATTTCTATGGTTCGGGAAATTATTAT	CACGCCGCCAAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATCACTTCAAGTATTTCTATGGTTCGGGAAATTATTATCACGCCGCCAAGTTTGACTCC	VRDHFKYFYGSGNYYHAAKFDS	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  K  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6725   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTCAAGAATTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-48*03  47   ....................................CC....GT.G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  T  T  G  T  I  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6725   91   AGTGGATTTCATACATTAGTACTACTGGCACTATCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCC  180
V  93.2% (233/250)  IGHV3-48*03  137  .....G...............G..G...T.G..C.......................................................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      Q  N  S  L  Y  L  Q  M  K  S  L  R  A  E  D  T  A  I  Y  Y  C  V  R  D  H  F  K  Y  F  Y  
                    Query_6725   181  AGAACTCACTGTATCTGCAAATGAAGAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGTAAGAGATCACTTCAAGTATTTCTATG  270
V  93.2% (233/250)  IGHV3-48*03  227  .........................C........................G............CG.....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  89.3% (25/28)    IGHD3-10*01  1    -------------------------------------------------------------------------------.....A.....  11

                                      -CDR3-IMGT--------------------------->                                  
                                      G  S  G  N  Y  Y  H  A  A  K  F  D  S  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_6725   271  GTTCGGGAAATTATTATCACGCCGCCAAGTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  342
D  89.3% (25/28)    IGHD3-10*01  12   .......G.G.......-------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------.......A...............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_278965

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           375     3e-106
IGHD3-10*01                                                                                           23.8    0.013 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTAGAA	GGTTCGGGGAGT	CACGACTCTTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTAGAAGGTTCGGGGAGTCACGACTCTTCCTACTACGCTATGGTCGTC	ARDPLEGSGSHDSSYYAMVV	292	351	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	68	7	0	90.7
CDR1-IMGT	79	102	24	16	8	0	66.7
FR2-IMGT	103	153	51	46	5	0	90.2
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	108	6	0	94.7
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	268	28	0	90.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  T  V  S  C  K  A  S  G  D  T  F  R 
                    Query_6726   4    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGACGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAGA  93
V  90.5% (268/296)  IGHV1-46*01  1    ...G...................G.....................G....A....A...T...........A......T.........CC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  N  A  F  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  I  I  N  P  S  G  G  T  T  K  Y 
                    Query_6726   94   AACAATGCTTTCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCGATAATCAATCCTAGTGGTGGTACCACAAAATAC  183
V  90.5% (268/296)  IGHV1-46*01  91   .G.T.CTA.A.GC..........................................GA........C.............G.....GC...  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  D  L  T  S  L  R  S  E  D 
                    Query_6726   184  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGACCTGACCAGCCTGAGATCTGAGGAC  273
V  90.5% (268/296)  IGHV1-46*01  181  .................................................................G....G...................  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  I  Y  Y  C  A  R  D  P  L  E  G  S  G  S  H  D  S  S  Y  Y  A  M  V  V  W  G  Q  G 
                    Query_6726   274  ACGGCCATCTATTACTGTGCGAGAGATCCTTTAGAAGGTTCGGGGAGTCACGACTCTTCCTACTACGCTATGGTCGTCTGGGGCCAAGGG  363
V  90.5% (268/296)  IGHV1-46*01  271  ......G.G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (12/12)   IGHD3-10*01  11   ------------------------------------............------------------------------------------  22
J  94.2% (49/52)    IGHJ6*02     11   -----------------------------------------------------------........G.....A................  41

                                                           
                                       T  T  V  P  V  S  S 
                    Query_6726   364  ACCACGGTCCCCGTCTCCTCA  384
J  94.2% (49/52)    IGHJ6*02     42   .........A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_278964

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           269     2e-74
IGHD3-16*02                                                                                           12.2    33   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*02	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GATCTCC	TATTGTTAT	GAGCGGGACACGGTTTTCGAGTCGGGCTCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTCCTATTGTTATGAGCGGGACACGGTTTTCGAGTCGGGCTCCCCTTGACCAC	RDLLLL*AGHGFRVGLPLTT	242	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	29	28	0	1	96.6
CDR1-IMGT	29	52	24	18	6	0	75
FR2-IMGT	53	103	51	46	5	0	90.2
CDR2-IMGT	104	127	24	18	6	0	75
FR3-IMGT	128	241	114	97	17	0	85.1
CDR3-IMGT (germline)	242	245	4	4	0	0	100
Total	N/A	N/A	246	211	34	1	85.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R   S  P  V  Q  P  L  V  S  P  S  P  N  M  P  *  V  G  S  D  R  L  Q  G  R  G  C 
                    Query_6727   1    GGTCCCTGAGA-TCTCCTGTGCAGCCTCTGGTTTCACCTTCACCAAACATGCCCTGAGTTGGGTCCGACAGGCTCCAGGGAAGGGGCTGC  89
V  85.8% (211/246)  IGHV3-23*01  47   ...........C...................A........T.G..GCT.....A....C........C.....................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       S  G  S  Q  L  L  V  V  M  V  V  P  R  P  P  *  T  P  *  K  A  G  S  P  S  P  E  T  I  P 
                    Query_6727   90   AGTGGGTCTCAACTATTAGTGGTGATGGTCGTGCCACGTCCACCTTAGACTCCGTGAAAGGCCGGTTCACCATCTCCAGAGACAATTCCA  179
V  85.8% (211/246)  IGHV3-23*01  137  ...........G...........AG....G..AG...A.A.TA.GC............G...............................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                       *  T  L  C  I  C  N  *  T  A  *  E  S  T  T  R  P  C  T  I  V  R  D  L  L  L  L  *  A  G 
                    Query_6727   180  TGAACACTTTGTATCTGCAACTGAACAGCCTGAGAGTCGACGACTCGGCCCTGTACTATTGTGCGAGATCTCCTATTGTTATGAGCGGGA  269
V  85.8% (211/246)  IGHV3-23*01  227  A......GC...........A...............C...G...A.....G.A..T..C.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  88.9% (8/9)      IGHD3-16*02  26   -------------------------------------------------------------------------...C.....--------  34

                                      R3-IMGT------------------------>                                  
                                       H  G  F  R  V  G  L  P  L  T  T  G  A  R  E  P  W  S  P  S  L  Q 
                    Query_6727   270  CACGGTTTTCGAGTCGGGCTCCCCTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  335
J  95.2% (40/42)    IGHJ4*02     7    ------------------------.....T...............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_278966

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD2-2*01                                                                                            21.8    0.047 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	GGATTTTGTCATAGTACCAACTG	TCCGGGTGCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGGATTTTGTCATAGTACCAACTGTCCGGGTGCGTGCTTTTGATATC	ARQDFVIVPTVRVRAFDI	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  I  F  T  N  Y
                    Query_6728   1    GCAGCTGGTGCAGTCTGGAGCAGAACTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACATCTTCACCAACTA  90
V  93.1% (271/291)  IGHV5-51*01  6    ........................GG.......................................G...........G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  L  G  W  V  R  Q  M  P  G  G  G  L  E  W  M  G  I  I  Y  P  R  G  S  D  T  R  Y  S  P
                    Query_6728   91   CTGGCTTGGCTGGGTGCGCCAGATGCCCGGGGGAGGCCTGGAATGGATGGGGATCATCTATCCTCGTGGCTCTGATACCAGATACAGTCC  180
V  93.1% (271/291)  IGHV5-51*01  96   ....A.C........................AA.........G.....................G...A..................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  I  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  D  S  L  K  A  S  D  S  A
                    Query_6728   181  GTCATTCCAAGGCCAGATCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGGACAGCCTGAAGGCCTCGGACAGCGC  270
V  93.1% (271/291)  IGHV5-51*01  186  ...C............G...........................G...................AG....................C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  Q  D  F  V  I  V  P  T  V  R  V  R  A  F  D  I  W  G  Q  G  T  V  V  T
                    Query_6728   271  CATGTATTACTGTGCGAGACAGGATTTTGTCATAGTACCAACTGTCCGGGTGCGTGCTTTTGATATCTGGGGCCAAGGGACAGTGGTGAC  360
V  93.1% (271/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  82.6% (19/23)    IGHD2-2*01   2    ---------------------....A....AG........G...----------------------------------------------  24
J  95.7% (45/47)    IGHJ3*02     4    ------------------------------------------------------............................A....C..  39

                                                 
                                        V  S  S  
                    Query_6728   361  CGTCTCTTCAG  371
J  95.7% (45/47)    IGHJ3*02     40   ...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_278961

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           392     2e-111
IGHD3-9*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	CTCGATCTTACGAT	TGGTTATTATAAC	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGACTCGATCTTACGATTGGTTATTATAACCTTGACCAG	ARLDLTIGYYNLDQ	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	63	7	0	90
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  R  P  G  E  S  L  T  I  S  C  V  A  S  G  Y  T  F  S  T  Y
                    Query_6729   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAGGCCGGGGGAGTCTCTGACGATCTCCTGTGTGGCTTCTGGATACACTTTTTCCACCTA  90
V  93.4% (270/289)  IGHV5-51*03  6    ....................C........A..A.................A..........AA..G...........GC...A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  S  Y  S  P
                    Query_6729   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGTAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGTTACAGTCC  180
V  93.4% (270/289)  IGHV5-51*03  96   ........G.....................G.............G....................................A.....C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6729   181  GTCCTTCCAAGGCCAGGTCACCATTTCAGCCGACAAGTCCATCAGAACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (270/289)  IGHV5-51*03  186  ........................C....................C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  L  D  L  T  I  G  Y  Y  N  L  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6729   271  CATGTATTACTGTGCAAGACTCGATCTTACGATTGGTTATTATAACCTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.4% (270/289)  IGHV5-51*03  276  ...............G...----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (13/13)   IGHD3-9*01   19   ---------------------------------.............-------------------------------------------  31
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------------------.....T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_278960

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD1-26*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGG	TAGTGGG	CAATACAGTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCT	ARGGSGQYSAYFGS	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  I  S  D
                    Query_6730   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCATCTGGATACAGCTTTATCAGTGA  90
V  93.1% (269/289)  IGHV5-51*01  6    .............................A....................A..............GT................C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  G  K  G  L  D  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  S  P
                    Query_6730   91   CTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGACTGGATGGGGGTCATTTATCCTGGTGACTCTGAAACCAGATATAGTCC  180
V  93.1% (269/289)  IGHV5-51*01  96   .......................T..................G.........A....C.................T........C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  T  S  L  K  A  S  D  T  A
                    Query_6730   181  GTCCTTCCAAGGCCAGGTCACCATTTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGACCAGCCTGAAGGCCTCGGACACCGC  270
V  93.1% (269/289)  IGHV5-51*01  186  ........................C...................G....................G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  F  C  A  R  G  G  S  G  Q  Y  S  A  Y  F  G  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6730   271  CATATACTTCTGTGCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.1% (269/289)  IGHV5-51*01  276  ...G..T.A..........----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD1-26*01  5    ------------------------.......----------------------------------------------------------  11
J  93.6% (44/47)    IGHJ4*02     2    ------------------------------------------........A..AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_278963

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           335     4e-94
IGHD6-19*01                                                                                           12.2    32   
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-19*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCTTG	GCACTGGCT	CCTCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATCGCTTGGCACTGGCTCCTCGTGCTTTCGATGTC	TRDRLALAPRAFDV	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	235	21	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  G  D  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6731   1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCAATTTTGGTGATTATGCTATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  91.8% (235/256)  IGHV3-49*04  47   ....................................CC...................G.....................G..........  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  L  G  F  I  R  T  T  A  Y  G  A  T  T  E  Y  A  A  S  V  E  D  R  L  T  I  S  R  D  
                    Query_6731   91   AGTGGTTAGGTTTCATAAGAACAACAGCTTATGGTGCGACAACAGAGTATGCCGCGTCTGTGGAGGACAGACTCACCATCTCAAGAGATG  180
V  91.8% (235/256)  IGHV3-49*04  137  .....G..........T....GC.A...........G.........A..C............A.A.G....T..................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  T  R  D  R  L  A  L  
                    Query_6731   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAGAGTGAAGACACAGCCGTGTATTATTGTACTAGAGATCGCTTGGCACTGG  270
V  91.8% (235/256)  IGHV3-49*04  227  ........................................A.CC..G.................C...........--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  88.9% (8/9)      IGHD6-19*01  8    -----------------------------------------------------------------------------------...G...  14

                                      IMGT--------------->                                  
                                      A  P  R  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6731   271  CTCCTCGTGCTTTCGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
D  88.9% (8/9)      IGHD6-19*01  15   ..----------------------------------------------------  16
J  97.9% (46/47)    IGHJ3*01     4    -------......T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_278962

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6732   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_6732   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_6732   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_6732   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_44002

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           364     5e-103
IGHD3-16*01                                                                                           14.1    7.9   
IGHJ3*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCC	GTATTAT	CGC	ATCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCCCGTATTATCGCATC	TRGPYYRI	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6733   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAACTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-48*03  47   .............................................GT...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  P  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6733   91   AATGGGTTTCATACATTAGTAGTAGTGGTAGTCCCATATATTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (241/249)  IGHV3-48*03  137  .G..............................A.......C.................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      K  N  S  L  Y  L  Q  T  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  G  P  Y  Y  R  I  W  
                    Query_6733   181  AGAACTCACTGTATCTGCAAACTAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTACGAGAGGCCCGTATTATCGCATCTGGG  270
V  96.8% (241/249)  IGHV3-48*03  227  .....................TG.......................................G......---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-16*01  1    -------------------------------------------------------------------------.......----------  7
J  100.0% (36/36)   IGHJ3*02     14   -----------------------------------------------------------------------------------.......  20

                                                                   
                                      G  Q  G  T  M  V  T  V  S  S 
                    Query_6733   271  GCCAAGGGACAATGGTCACCGTCTCTTCA  299
J  100.0% (36/36)   IGHJ3*02     21   .............................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_44003

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGCCCTACTTATTATGCCAA	TAGTGGTT	CAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCCCTACTTATTATGCCAATAGTGGTTCAGACTTTGACTAC	ARGGPTYYANSGSDFDY	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  Y  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6734   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGCAGCTACTACATGAGCTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  93.9% (231/246)  IGHV3-53*01  47   ...........................................T...A.........................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  V  H  S  A  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_6734   91   AGTGGGTCTCAGTTGTTCATAGCGCTGGAAGTACATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.9% (231/246)  IGHV3-53*01  137  ..............A..T......G...T..C.....C..C.................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------------CDR3-IMGT-
                                      N  T  L  N  L  Q  M  N  S  L  R  V  Q  D  T  A  V  Y  Y  C  A  R  G  G  P  T  Y  Y  A  N  
                    Query_6734   181  ACACGCTAAATCTTCAAATGAACAGCCTGAGAGTCCAGGACACGGCCGTGTATTATTGTGCGAGAGGAGGCCCTACTTATTATGCCAATA  270
V  93.9% (231/246)  IGHV3-53*01  227  .......GT........................C.G...................C..........------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-22*01  16   ----------------------------------------------------------------------------------------..  17

                                      ------------------->                                  
                                      S  G  S  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6734   271  GTGGTTCAGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (8/8)     IGHD3-22*01  18   ......------------------------------------------------  23
J  100.0% (45/45)   IGHJ4*02     4    ---------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_44000

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD3-10*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGGAT	GGGAGTTA	CGAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATGGGAGTTACGAAACTTTGACTAC	ARGGWELRNFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_6735   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACAGCTTCACCAACTA  90
V  95.8% (277/289)  IGHV5-51*03  6    ....................C.............................................T..............T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  T  Y  S  P
                    Query_6735   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCACATACAGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   ............................................................................A...G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  M  S  I  N  T  A  Y  L  Q  R  S  S  L  K  A  S  D  T  A
                    Query_6735   181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACATGTCCATCAACACCGCCTACCTGCAGCGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  ........A..........................A........G................T............................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  F  C  A  R  G  G  W  E  L  R  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6735   271  CATCTATTTCTGTGCGAGAGGGGGATGGGAGTTACGAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.8% (277/289)  IGHV5-51*03  276  ...G....A..........----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD3-10*01  17   --------------------------........-------------------------------------------------  24
J  100.0% (45/45)   IGHJ4*02     4    --------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_44001

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           360     1e-101
IGHD3-9*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGACCTAC	TACGTTATTTTGACTGGTTATTA	ACAGGTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGACCTACTACGTTATTTTGACTGGTTATTAACAGGTTATGACTTC	ARGDLLRYFDWLLTGYDF	261	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	19	5	0	79.2
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	18	3	0	85.7
FR3-IMGT	147	260	114	108	6	0	94.7
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	249	19	0	92.9


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  T  F  T  G  Y  F  W  T  W  I  R  
                    Query_6736   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACTTGCGCTGTCTATGGTGGGACCTTTACTGGTTATTTCTGGACCTGGATCCGCC  90
V  92.9% (249/268)  IGHV4-34*01  26   ........T.......T....................C..................T....C.G......C.A.....G...........  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  S  H  S  G  S  T  N  Y  S  P  S  L  K  S  R  V  T  
                    Query_6736   91   AGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGGAAATCAGTCATAGTGGATCCACCAACTACAGCCCGTCCCTCAAGAGTCGAGTCACCC  180
V  92.9% (249/268)  IGHV4-34*01  116  ................G......................A..........AG...........A.........................A  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      L  S  V  D  T  S  K  N  Q  I  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_6736   181  TGTCAGTAGACACGTCCAAGAACCAAATCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCG  270
V  92.9% (249/268)  IGHV4-34*01  206  .A.......................GT...............G.............................................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  

                                      -------------CDR3-IMGT--------------------->                                  
                                      D  L  L  R  Y  F  D  W  L  L  T  G  Y  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_6736   271  ACCTACTACGTTATTTTGACTGGTTATTAACAGGTTATGACTTCTGGGGCCAGGGAACTCTGGTCGCCGTCTCCTCAG  348
D  95.7% (22/23)    IGHD3-9*01   5    ------....A..................-------------------------------------------------  27
J  92.7% (38/41)    IGHJ4*02     8    -------------------------------------.....A...............C......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_44006

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           338     4e-95
IGHD2-21*02                                                                                           19.9    0.15 
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGTG	GGTGGTGACT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGTGGGTGGTGACTACTACTTTGACTAC	ARGVGGDYYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  I  S  S  G  H  Y  W  S  W  I  R  Q  R  P  G  K  G 
                    Query_6737   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCATCAGTAGTGGTCACTACTGGAGCTGGATCCGCCAGCGCCCAGGGAAGGGC  90
V  93.2% (233/250)  IGHV4-31*01  49   ..................A.....................G....G.....T........................A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  K  T  Y  Y  N  P  S  L  K  S  L  V  A  I  S  V  D  T  S 
                    Query_6737   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAAAACCTACTACAACCCGTCCCTCAAGAGCCTAGTTGCCATATCAGTGGACACGTCT  180
V  93.2% (233/250)  IGHV4-31*01  139  ..................................GC..........................T......A..........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  E  F  S  L  K  M  N  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  G  D  Y  Y 
                    Query_6737   181  AAGAATGAGTTCTCCCTAAAGATGAACTCTATGACGGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGAGTGGGTGGTGACTACTAC  270
V  93.2% (233/250)  IGHV4-31*01  229  .....CC..........G...C...G....G....T..................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (10/10)   IGHD2-21*02  11   ---------------------------------------------------------------------------..........-----  20
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_6737   271  TTTGACTACTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    ......................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_44007

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           377     1e-106
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	ARPSSASGWHFDN	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	70	4	0	94.6
CDR1-IMGT	78	101	24	18	6	0	75
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	18	6	0	75
FR3-IMGT	177	290	114	105	9	0	92.1
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	267	26	0	91.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  
                    Query_6738   4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCA  93
V  91.1% (267/293)  IGHV5-51*03  2    ..G..........................G.............G.........................G.........C.GC..T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  D  I  R  Y  
                    Query_6738   94   GTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGATATTAGATATA  183
V  91.1% (267/293)  IGHV5-51*03  92   .C..C.......G..................................................AT...GG...........CC.....C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_6738   184  GTCCGTCCTTCCAAGGCCAGGTCACCATTTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  91.1% (267/293)  IGHV5-51*03  182  .C..........................C....C..A.AA........G.........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  G  M  Y  Y  C  A  R  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6738   274  CCGGCATGTATTACTGTGCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  363
V  91.1% (267/293)  IGHV5-51*03  272  ...C...................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ----------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    ---------------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_117673

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGATGGA	ATTACTAT	CAAACGAAGCA	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCGATGGAATTACTATCAAACGAAGCAATGGTTTTGATATA	TRGDGITIKRSNGFDI	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_6739   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGGCTTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  94.7% (233/246)  IGHV3-53*01  47   ................................................A.......AGC......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_6739   91   AGTGGGTCTCAGTTATTTACAGCGGTGGTACCACATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.7% (233/246)  IGHV3-53*01  137  ...................T..........G........A..................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  L  Y  Y  C  T  R  G  D  G  I  T  I  K  R  
                    Query_6739   181  ACACGCTGTATCTTCAAATGCACAGCCTGAGAGCCGACGACACGGCCCTGTACTACTGTACGAGAGGCGATGGAATTACTATCAAACGAA  270
V  94.7% (233/246)  IGHV3-53*01  227  ....................A................G.........G....T......G......------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  3    --------------------------------------------------------------------------........--------  10

                                      ---------------->                                  
                                      S  N  G  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6739   271  GCAATGGTTTTGATATATGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  321
J  93.8% (45/48)    IGHJ3*02     3    ---...C.........C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_44008

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           357     1e-100
IGHD3-3*01                                                                                            33.4    1e-05 
IGHJ5*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCCCTAAGTG	ATTACGATTTTTGGAGT	TCGGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCCCTAAGTGATTACGATTTTTGGAGTTCGGGCTGGTTCGACCCC	AKPLSDYDFWSSGWFDP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6740   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCGACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-23*01  47   ..........................................G.AG.................................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  V  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6740   91   AGTGGGTCTCAGGTATTAGTGGTAGCGGTGGTGTCACAAACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (238/248)  IGHV3-23*01  137  ............C............T......AG....T...................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  P  L  S  D  Y  D  F  
                    Query_6740   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCTTATATTACTGTGCGAAACCCCTAAGTGATTACGATTTTT  270
V  96.0% (238/248)  IGHV3-23*01  227  ..................................................G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (17/17)   IGHD3-3*01   3    ------------------------------------------------------------------------------............  14

                                      GT-------------------->                                  
                                      W  S  S  G  W  F  D  P  W  G  R  G  T  L  V  P  F  S  S  
                    Query_6740   271  GGAGTTCGGGCTGGTTCGACCCCTGGGGCCGGGGAACCCTGGTCCCCTTCTCCTCAG  327
D  100.0% (17/17)   IGHD3-3*01   15   .....----------------------------------------------------  19
J  93.6% (44/47)    IGHJ5*02     5    ----------....................A.............A..G.........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_44009

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     8e-121
IGHD5-18*01                                                                                           16.1    2.6   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTTCCCAACCGAAATGTCAAAAC	GTGGATAC	CTGCGCCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTCCCAACCGAAATGTCAAAACGTGGATACCTGCGCCCTCTAC	ARLSQPKCQNVDTCALY	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	282	11	0	96.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  
                    Query_6741   3    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTTCCA  92
V  96.2% (282/293)  IGHV5-51*03  2    ..G...................................................................T...............A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_6741   93   GTTACTGGATCGTCTGGGTGCGCCAGATGCCGGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  182
V  96.2% (282/293)  IGHV5-51*03  92   .C..........G..................C..........................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  T  S  L  K  A  S  D  
                    Query_6741   183  GGCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGACCAGCCTGAAGGCCTCGGACA  272
V  96.2% (282/293)  IGHV5-51*03  182  .C..............................................................G....G....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  I  Y  Y  C  A  R  L  S  Q  P  K  C  Q  N  V  D  T  C  A  L  Y  W  G  Q  G  T  L  V  
                    Query_6741   273  CCGCCATTTATTATTGTGCGAGACTTTCCCAACCGAAATGTCAAAACGTGGATACCTGCGCCCTCTACTGGGGCCAGGGAACCCTGGTCA  362
V  96.2% (282/293)  IGHV5-51*03  272  .......G.....C.........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD5-18*01  1    -----------------------------------------------........-----------------------------------  8
J  97.4% (37/38)    IGHJ4*02     11   ----------------------------------------------------------------..........................  36

                                                  
                                      T  V  S  A  
                    Query_6741   363  CCGTCTCCGCAG  374
J  97.4% (37/38)    IGHJ4*02     37   ........T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_58370

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD3-3*01                                                                                            14.1    8.2  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACGCGGGA	TGGCTATAATACC	TA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACGCGGGATGGCTATAATACCTATTGACTGC	ARGRGMAIIPIDC	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  T  Y  Y  W  T  W  I  R  R  P  P  G  K  G  L  E 
                    Query_6742   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTACTTACTACTGGACCTGGATCCGGCGGCCCCCAGGGAAGGGACTGGAA  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................A...G...........G...........A.....................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  T  H  Y  S  G  D  T  N  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  T  S  K  N 
                    Query_6742   91   TGGATTGGCTATACTCATTACAGTGGGGACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCATCATATCAGTAGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-59*01  139  ........G....TCT...........AG...................................C.........................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       L  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  G  M  A  I  I  P  I 
                    Query_6742   181  CTGCTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGGACGCGGGATGGCTATAATACCTATT  270
V  93.4% (228/244)  IGHV4-59*01  229  .A.T.........A.......................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (11/13)    IGHD3-3*01   19   -------------------------------------------------------------------------...T...T.....----  31
J  97.6% (40/41)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                 
                                       D  C  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_6742   271  GACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  309
J  97.6% (40/41)    IGHJ4*02     9    ....A..................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_258620

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           371     7e-105
IGHD3-10*01                                                                                           21.8    0.045 
IGHJ5*01                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-10*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GC	ACTATGGTTCG	CCGACTGGGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCACTATGGTTCGCCGACTGGGGACTGGTTCGACTCC	ARHYGSPTGDWFDS	281	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	91	24	17	4	3	70.8
FR2-IMGT	92	142	51	48	3	0	94.1
CDR2-IMGT	143	166	24	23	1	0	95.8
FR3-IMGT	167	280	114	104	10	0	91.2
CDR3-IMGT (germline)	281	285	5	5	0	0	100
Total	N/A	N/A	287	264	20	3	92


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  P  E  V  R  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T     Y 
                    Query_6743   2    CAGCTGGTGCAGTCTGGACCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGCTACAGCTTCACA---TAC  88
V  92.0% (264/287)  IGHV1-18*04  7    ..................G.........A..........................................T....C...T..CAGC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  I  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  D  S  A  Q 
                    Query_6743   89   GGTATCAGTTGGATACGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTGACACAGACAGTGCACAG  178
V  92.0% (264/287)  IGHV1-18*04  97   ........C...G.G.........................................................A.....A..TA.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  R  D  T  S  T  N  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_6743   179  AAGTTTCAGGGCAGAGTCACCATGACCAGAGACACATCCACGAACACAGCCTACATGGAACTGAGGAGCCTGAGATCTGACGACACGGCC  268
V  92.0% (264/287)  IGHV1-18*04  187  ...C.C......................C..............G...............G..............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       I  Y  Y  C  A  R  H  Y  G  S  P  T  G  D  W  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6743   269  ATTTATTACTGTGCGAGGCACTATGGTTCGCCGACTGGGGACTGGTTCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  92.0% (264/287)  IGHV1-18*04  277  G.G..............-----------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                          
D  100.0% (11/11)   IGHD3-10*01  6    -------------------...........----------------------------------------------------------  16
J  97.9% (47/48)    IGHJ5*01     4    ----------------------------------------......................A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_258623

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           341     5e-96
IGHD2-21*01                                                                                           10.3    116  
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-21*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TA	GGTGA	AGCCCAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGTGAAGCCCAGTACTGGTACTTCGATCTC	ARVGEAQYWYFDL	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6744   1    ACCCTGTCCCTCACCTGCAGTGTTTCTGGTGACTCAATCAGCGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (231/244)  IGHV4-59*01  49   ...................C...C.......G...C.....TA...A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  T  S  E  N 
                    Query_6744   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTCGACACGTCCGAGAAC  180
V  94.7% (231/244)  IGHV4-59*01  139  .................................A.............................A..........A.........A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       K  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  G  E  A  Q  Y  W  Y  F 
                    Query_6744   181  AAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTAGGTGAAGCCCAGTACTGGTACTTC  270
V  94.7% (231/244)  IGHV4-59*01  229  C..................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*01  14   ------------------------------------------------------------------.....-------------------  18
J  100.0% (52/52)   IGHJ2*01     2    ------------------------------------------------------------------------------............  13

                                      ----->                                  
                                       D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6744   271  GATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  310
J  100.0% (52/52)   IGHJ2*01     14   ........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_258624

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGTTTCACC	GTGGCTG	ATCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGTTTCACCGTGGCTGATCCTTTTGACTAC	ARGRFTVADPFDY	239	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	20	4	0	83.3
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	22	2	0	91.7
FR3-IMGT	125	238	114	110	4	0	96.5
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	232	221	11	0	95.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  I  T  F  S  T  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  Y  V  S  T  I 
                    Query_6745   14   TGTGCAGCCTCTGGAATCACCTTCAGCACGTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGGAATATGTTTCAACTATT  103
V  95.3% (221/232)  IGHV3-64*01  64   ...............T..........T.GC......................................................G.....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  Y  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  N  G  E  S  T  H  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_6745   104  AGTAGTAATGGGGAGAGCACACATTATGCAAACTCTGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTT  193
V  95.3% (221/232)  IGHV3-64*01  154  .............GT......T....................................................................  243
                                       S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------CDR3-IMGT-------------->      
                                       Q  M  G  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  G  R  F  T  V  A  D  P  F  D  Y  W  G 
                    Query_6745   194  CAAATGGGCAGCCTGAGAGGTGAGGACACGGCTGTATATTACTGTGCGAGAGGCCGTTTCACCGTGGCTGATCCTTTTGACTACTGGGGC  283
V  95.3% (221/232)  IGHV3-64*01  244  ...................C........T......G................--------------------------------------  295
                                       Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                                        
D  100.0% (7/7)     IGHD6-19*01  11   ---------------------------------------------------------------.......--------------------  17
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------------------------------------------------...............  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_6745   284  CAGGGAACCCTGGTCACCGTCTCCTCAG  311
J  100.0% (43/43)   IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_258625

Length=314
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         366     1e-103
IGHD5-12*01                                                                                           10.3    110   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	GTGGC	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGCGGCCTAC	ARVAAY	241	258	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	111	3	0	97.4
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	240	6	0	97.6


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  V  R  Q  P  P  G  K  G  L 
                    Query_6746     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCATCAGCAGTGGTTACTACTGGGGCTGGGTCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  97.6% (240/246)  IGHV4-38-2*01  49   ...............................................................A..........................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  I  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S  K 
                    Query_6746     91   GAGTGGATTGGGATTATCTACCATAGTGGGAGCACCTACTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTAGACACGTCCAAG  180
V  97.6% (240/246)  IGHV4-38-2*01  139  .............G......T...................................G.................................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----CDR3-IMGT--->            
                                         N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  A  A  Y  W  G  Q  G 
                    Query_6746     181  AACCAGTTCTCCCTGAAGCTGAACTCTGTTACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGTGGCGGCCTACTGGGGCCAGGGA  270
V  97.6% (240/246)  IGHV4-38-2*01  229  ......................G......G....................................------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (5/5)     IGHD5-12*01    10   ------------------------------------------------------------------.....-------------------  14
J  97.4% (37/38)    IGHJ4*02       11   --------------------------------------------------------------------------................  26

                                                              
                                         I  L  V  T  V  S  S  
                    Query_6746     271  ATCCTGGTCACCGTCTCCTCAG  292
J  97.4% (37/38)    IGHJ4*02       27   .C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30304617


Query= Query_258626

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            394     7e-112
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_6747  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.4% (271/290)  IGHV1-8*02  6    .............................................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_6747  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.4% (271/290)  IGHV1-8*02  96   ........A.........................................................C.......................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  N  L  N  A  E  D  T  A
                    Query_6747  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAACCTCAACGCTGAAGACACGGC  270
V  93.4% (271/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A..................C......G...G.GAT....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6747  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.4% (271/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_258627

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6748   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ......................................C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_6748   91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P 
                    Query_6748   181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC  270
V  90.6% (221/244)  IGHV4-59*01  229  ...........G...C....C...........T............G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  93.5% (43/46)    IGHJ5*02     6    ------------------------------------------------------------------------------............  17

                                                                        
                                       W  G  Q  G  A  L  V  S  V  S  S  
                    Query_6748   271  TGGGGCCAGGGGGCCCTGGTCTCCGTCTCCTCAG  304
J  93.5% (43/46)    IGHJ5*02     18   ...........AA........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_258629

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           330     1e-92
IGHD3-16*01                                                                                           10.3    114  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TATGA	CGGG	GGTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATATGACGGGGGTAAGGACGTC	RDMTGVRTS	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	107	51	49	1	1	96.1
CDR2-IMGT	108	128	21	18	3	0	85.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	249	232	16	1	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  I  V  S  G  D  S  I  S  T  T  S  Y  Y  W  G  W  I  R  Q  P   Q  G  R  G
                    Query_6749   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGACTCCATCAGCACTACTAGTTACTACTGGGGCTGGATCCGCCAGCCCC-AGGGAAGGGG  89
V  93.2% (232/249)  IGHV4-39*01  49   ...................C...........G...........G..G................................C..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                        W  S  G  L  G  V  S  I  I  L  R  T  P  T  T  T  R  P  S  R  V  E  S  P  Y  Q  *  T  R  P
                    Query_6749   90   CTGGAGTGGATTGGGGGTATCTATTATACTGAGAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  179
V  93.2% (232/249)  IGHV4-39*01  139  ...............A............G..G..G..........................................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                        R  T  S  F  T  W  S  *  A  L  *  P  P  Q  T  R  L  R  I  F  V  R  D  M  T  G  V  R  T  S
                    Query_6749   180  AAGAACCAGTTTTACCTGGAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGCGTATTTTTGTACGAGATATGACGGGGGTAAGGACGTC  269
V  93.2% (232/249)  IGHV4-39*01  229  ...........C.C....A.................................T.....AC...G.....---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-16*01  5    ---------------------------------------------------------------------.....----------------  9
J  97.8% (44/45)    IGHJ6*02     18   ------------------------------------------------------------------------------....T.......  29

                                                                       
                                        G  A  K  G  P  R  S  P  S  P   
                    Query_6749   270  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  302
J  97.8% (44/45)    IGHJ6*02     30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_117670

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHD6-25*01                                                                                           12.2    36    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TT	AGCGGC	GAAGGTAACCTTA	TTGCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTAGCGGCGAAGGTAACCTTATTGCCTAC	AKLSGEGNLIAY	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	297	7	6	1	0	85.7
Total	N/A	N/A	295	280	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 
                    Query_6750   3    GAGGTCCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACC  92
V  94.9% (280/295)  IGHV5-51*01  1    .....G.................................................................T..................  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  Y  D  V  R  Y 
                    Query_6750   93   AGGTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTATGATGTGAGATAC  182
V  94.9% (280/295)  IGHV5-51*01  91   ..C.........................................................................C....ACC......  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       R  P  S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  G 
                    Query_6750   183  AGACCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGCACCGCCTTTTTGCAGTGGAGCAGCCTGAAGGCCTCGGGC  272
V  94.9% (280/295)  IGHV5-51*01  181  ..C.....................................A.................ACC...........................A.  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  I  Y  Y  C  A  K  L  S  G  E  G  N  L  I  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6750   273  ACCGCCATTTATTACTGTGCGAAACTTAGCGGCGAAGGTAACCTTATTGCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  94.9% (280/295)  IGHV5-51*01  271  ........G.............G..---------------------------------------------------------------  295
                                       T  A  M  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD6-25*01  10   ---------------------------......-------------------------------------------------------  15
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------...A......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_73958

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           372     2e-105
IGHD3-22*01                                                                                           43.0    2e-08 
IGHJ1*01                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-22*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GACA	TATTACTATGATACTAGTGGTTATT	CGCTTGTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACAGAGACATATTACTATGATACTAGTGGTTATTCGCTTGTTTACTTCAAACAC	ATETYYYDTSGYSLVYFKH	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6751   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  97.6% (244/250)  IGHV3-74*01  47   ...............................A..........................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  T  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6751   91   TGTGGGTCTCACGTATTAATAGTGATGGGAGTACAACAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (244/250)  IGHV3-74*01  137  .................................GC....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  E  T  Y  Y  Y  D  T  
                    Query_6751   181  AGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCAACAGAGACATATTACTATGATACTA  270
V  97.6% (244/250)  IGHV3-74*01  227  ..........................................................C.......G...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  96.0% (24/25)    IGHD3-22*01  2    --------------------------------------------------------------------------.............G..  17

                                      -IMGT----------------------->                                  
                                      S  G  Y  S  L  V  Y  F  K  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6751   271  GTGGTTATTCGCTTGTTTACTTCAAACACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  333
D  96.0% (24/25)    IGHD3-22*01  18   .........------------------------------------------------------  26
J  95.7% (44/46)    IGHJ1*01     7    -----------------......C.G.....................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_55729

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           344     6e-97
IGHD2-2*01                                                                                            12.2    31   
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGCAATCAA	CAGCTG	N/A	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGCAATCAACAGCTGGATGGTTTTGATATG	AREGNQQLDGFDM	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_6752   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCCCCAGGGAGGGGGCTGG  90
V  94.0% (235/250)  IGHV3-48*03  47   .........................................................................T.......A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  G  N  G  G  R  N  I  Y  Y  R  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6752   91   AGTGGGTTTCATACATTGGAAATGGTGGTCGTAACATATACTACAGAGACTCTGTGAAGGGCCGGTTCACCATCTCCCGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-48*03  137  .................A.T.G.A.....A...C..........GC..................A............A............  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  G  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  G  N  Q  Q  L  D  
                    Query_6752   181  AGAACTCACTGTATCTGCAAATGAATGGCCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGCGAGAGAGGGCAATCAACAGCTGGATG  270
V  94.0% (235/250)  IGHV3-48*03  227  .........................CA.......................G...................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-2*01   19   --------------------------------------------------------------------------------......----  24
J  91.8% (45/49)    IGHJ3*02     2    --------------------------------------------------------------------------------------....  5

                                      ---------->                                  
                                      G  F  D  M  W  G  R  G  T  M  V  T  V  S  S  
                    Query_6752   271  GTTTTGATATGTGGGGCCGAGGGACGATGGTCACCGTCTCTTCAG  315
J  91.8% (45/49)    IGHJ3*02     6    C.........C.......A......A...................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_55728

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           290     2e-80
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	215	30	0	87.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_6753   1    ACCCTGTCCCTCACCTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  87.8% (215/245)  IGHV4-34*01  49   .......................CTA..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_6753   91   TGGATTGGGGAAATCAGCCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAA  180
V  87.8% (215/245)  IGHV4-34*01  139  ................AT...........CA.C.AC......C..T......A...............A....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W 
                    Query_6753   181  CAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCTGGCGAAGACAGCGCAACTGG  270
V  87.8% (215/245)  IGHV4-34*01  229  ..GT...........C..A......T.....................G.....C......A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (49/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------.......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6753   271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (49/50)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_73959

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           318     6e-89
IGHD5-12*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATTACATCGAGA	TGGCTAC	AATAGAGGAGTT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATTACATCGAGATGGCTACAATAGAGGAGTTTTTGCCTTC	ARELHRDGYNRGVFAF	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  R  T  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6754   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGGACCAATTACATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  91.1% (225/247)  IGHV3-53*01  47   ...........................................T.G...C........C..............................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      Q  W  V  S  L  I  H  S  G  G  T  T  S  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  K  S  T  
                    Query_6754   91   AGTGGGTCTCACTTATTCATAGTGGTGGGACCACGTCCTATTCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAAGTCCACTA  180
V  91.1% (225/247)  IGHV3-53*01  137  ...........G.....T....C.....T.G...A.A...CG........................................T....AG.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  V  Y  L  Q  M  V  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  L  H  R  D  G  Y  N  
                    Query_6754   181  ACACGGTATATCTTCAAATGGTCAACCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGAATTACATCGAGATGGCTACAATA  270
V  91.1% (225/247)  IGHV3-53*01  227  .....C.G............AA..G..........................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD5-12*01  11   -------------------------------------------------------------------------------.......----  17

                                      ---------------->                                  
                                      R  G  V  F  A  F  W  G  Q  G  A  L  V  T  V  S  P  
                    Query_6754   271  GAGGAGTTTTTGCCTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCCCAG  321
J  90.7% (39/43)    IGHJ4*02     6    --------....A..A.............A.................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_333239

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           386     2e-109
IGHD7-27*01                                                                                           12.2    37    
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD7-27*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	CTGGGG	CCTCGGATTCCAATTTCCT	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGGGGCCTCGGATTCCAATTTCCTCTATTACTATGGAATGGACGTC	ATGASDSNFLYYYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	267	20	0	93


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  R  Y
                    Query_6755   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGGTA  90
V  93.0% (267/287)  IGHV1-69*01  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  G  I  I  T  A  F  G  T  T  E  Y  G  Q
                    Query_6755   91   TGCCATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCAGGGATCATCACTGCCTTTGGAACAACAGAGTACGGACA  180
V  93.0% (267/287)  IGHV1-69*01  96   ...T..............................................G..........C..AT......T...G..A.C....C...  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  A  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  E  D  T  A
                    Query_6755   181  GAAGTTCCAGGGCAGAGCGACGATTACCGCGGACGAATCAACGAGCACAGCCTATATGGAGCTGCGCAGTCTGAGATCTGAAGACACGGC  270
V  93.0% (267/287)  IGHV1-69*01  186  .................TC....................C..............C.........A....C...........G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        A  Y  Y  C  A  T  G  A  S  D  S  N  F  L  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_6755   271  CGCGTATTACTGTGCGACTGGGGCCTCGGATTCCAATTTCCTCTATTACTATGGAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  93.0% (267/287)  IGHV1-69*01  276  ..T..............-------------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                           
D  100.0% (6/6)     IGHD7-27*01  5    -----------------......-------------------------------------------------------------------  10
J  94.5% (52/55)    IGHJ6*02     8    ------------------------------------------...C.....C..T...................................  55

                                             
                                        S  S 
                    Query_6755   361  CTCCTCA  367
J  94.5% (52/55)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_333238

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           302     3e-84
IGHD2-15*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GTCGGGAAGAAC	AGTGGTG	TCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTCGGGAAGAACAGTGGTGTCTTTTGACTTA	AKSGRTVVSFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	220	27	0	89.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  T  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6756   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCAACTTTAGCACGTATGCCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.1% (220/247)  IGHV3-23*01  47   ......................A.............C........GC..........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  N  S  T  K  Y  A  D  S  V  K  G  R  I  T  I  S  R  D  N  S  
                    Query_6756   91   AGTGGGTCTCAGCCATCAGTGGCAGTGGTAATAGCACAAAATATGCAGACTCCGTTAAGGGCCGGATCACCATCTCCAGAGACAATTCCA  180
V  89.1% (220/247)  IGHV3-23*01  137  .............T..T.....T......GG.......T.C..C...........G.........T........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  R  M  I  Y  L  Q  M  N  S  M  R  A  E  D  T  A  V  Y  L  C  A  K  S  G  R  T  V  V  S  
                    Query_6756   181  AGAGAATGATATATCTTCAAATGAACAGTATGAGAGCCGAGGACACGGCCGTATATCTTTGTGCGAAGTCGGGAAGAACAGTGGTGTCTT  270
V  89.1% (220/247)  IGHV3-23*01  227  ...AC.C.C.G.....G...........CC..........................TAC........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-15*01  11   -------------------------------------------------------------------------------.......----  17
J  90.7% (39/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                  
                                      F  D  L  W  G  Q  G  I  Q  V  T  V  S  S  
                    Query_6756   271  TTGACTTATGGGGCCAGGGAATCCAGGTCACCGTCTCCTCAG  312
J  90.7% (39/43)    IGHJ4*02     7    ......AC.............C..T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_87340

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           353     1e-99
IGHD4-17*01                                                                                           16.1    2.4  
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAGGCGGGGGG	CTACGGTG	GGGGGGGGGGGCTGGACTACCCGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAGGCGGGGGGCTACGGTGGGGGGGGGGGGCTGGACTACCCGGACTACGGTATGGACGTC	AKDKAGGYGGGGGLDYPDYGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  T  L  T  T  Y  A  M  S  W  V  R  L  G  P  G  K  R  L  
                    Query_6757   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAGTCACTCTTACCACCTATGCCATGAGCTGGGTCCGCCTGGGTCCAGGGAAGCGGCTGG  90
V  95.2% (238/250)  IGHV3-23*01  47   ................................T....CT...G..G.......................A..C..........G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  N  G  V  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6757   91   AATGGGTCTCAGGTATTAGTGGTAATGGTGTTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (238/250)  IGHV3-23*01  137  .G..........C...........G.....G...........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  K  A  G  G  Y  G  
                    Query_6757   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATAAGGCGGGGGGCTACGGTG  270
V  95.2% (238/250)  IGHV3-23*01  227  ......................................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD4-17*01  4    ----------------------------------------------------------------------------------........  11

                                      --CDR3-IMGT----------------------------->                                 
                                      G  G  G  G  L  D  Y  P  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6757   271  GGGGGGGGGGGCTGGACTACCCGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
J  100.0% (50/50)   IGHJ6*02     13   ------------------------..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_55720

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         360     1e-101
IGHD3-16*01                                                                                           16.1    2.4   
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD3-16*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCACCTTTAGTGT	AGTTATGC	CAGTATCGGCTGCTTGACCGGATGTTGCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGACCACCTTTAGTGTAGTTATGCCAGTATCGGCTGCTTGACCGGATGTTGCCACTACTACGGTATGGACGTC	VRDHL*CSYASIGCLTGCCHYYGMDV	241	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	248	8	7	1	0	87.5
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  V  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_6758     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCGTCAGCAGTGGTTACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  96.4% (239/248)  IGHV4-38-2*02  49   ..................A.................A.....................................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  F  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  P  V  D  T  S  K 
                    Query_6758     91   GAGTGGATTGGGAGTTTCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGCCAGTAGACACGTCCAAG  180
V  96.4% (239/248)  IGHV4-38-2*02  139  ...............A.......................................................AT.................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------------------
                                         N  Q  F  S  L  N  L  R  S  M  T  A  A  D  T  A  V  Y  Y  C  V  R  D  H  L  *  C  S  Y  A 
                    Query_6758     181  AACCAGTTCTCCCTGAACCTGAGGTCTATGACCGCCGCAGACACGGCCGTGTATTACTGTGTGAGAGACCACCTTTAGTGTAGTTATGCC  270
V  96.4% (239/248)  IGHV4-38-2*02  229  .................G.....C...G.................................C......----------------------  296
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD3-16*01    23   ---------------------------------------------------------------------------------........-  30

                                        -----CDR3-IMGT--------------------------------->                                 
                                         S  I  G  C  L  T  G  C  C  H  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6758     271  AGTATCGGCTGCTTGACCGGATGTTGCCACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  351
J  100.0% (53/53)   IGHJ6*02       10   ----------------------------.....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_55723

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           12.2    30   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGACGGGT	TGGCTG	CCC	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGACGGGTTGGCTGCCCGACGAC	ARGTGWLPDD	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  Y  C  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6759   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTACTACTGCAACTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*01  49   ...............................G..........A..........G.G..................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  N  T  G  N  T  N  H  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6759   91   TGGATTGGACATATCTACAACACTGGGAACACCAACCACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*01  139  ........GT.......TT...G.....G.......T.....................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  N  L  N  S  V  T  A  A  G  T  A  V  Y  Y  C  A  R  G  T  G  W  L  P  D  D  W 
                    Query_6759   181  CAGTTCTCCTTGAACCTGAACTCTGTGACCGCTGCGGGCACGGCCGTGTATTACTGTGCGAGAGGGACGGGTTGGCTGCCCGACGACTGG  270
V  93.0% (227/244)  IGHV4-59*01  229  .........C....G....G.................A..........................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  12   ------------------------------------------------------------------------......------------  17
J  95.0% (38/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------...T.....  17

                                                                     
                                       G  Q  G  T  L  A  T  V  S  S  
                    Query_6759   271  GGCCAGGGAACCCTGGCCACCGTCTCCTCAG  301
J  95.0% (38/40)    IGHJ4*02     18   ................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_55722

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            324     7e-91
IGHD3-10*01                                                                                           12.2    31   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TTAAGGGAAGTA	GTTCGTCGACTTATT	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTAAGGGAAGTAGTTCGTCGACTTATTACTGGTTCGACCCC	VKGSSSSTYYWFDP	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	241	1	1	0	0	100
Total	N/A	N/A	241	224	17	0	92.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  L  V  S  G  G  S  I  T  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_6760   1    ACCCTGTCCCTCACCTGCCTTGTCTCTGGTGGGTCCATTACCAGTAGTAACTGGTGGTCTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  92.9% (224/241)  IGHV4-4*02   49   ..................GC............C.....C.G................AG...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  A  D  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  P  L  D  K  S  K 
                    Query_6760   91   GAGTGGATTGCGGATATCTATTATAGTGGGAGCACCAATTACAACCCGTCCCTGAAGAGTCGAGTCACCATCCCATTAGACAAGTCCAAG  180
V  92.9% (224/241)  IGHV4-4*02   139  ..........G...A......C................C..............C.................AT..G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  K  G  S  S  S  S  T  Y  Y 
                    Query_6760   181  AACCAGTTCTCCCTGAAACTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGTTAAGGGAAGTAGTTCGTCGACTTATTAC  270
V  92.9% (224/241)  IGHV4-4*02   229  .................G......................................C....-----------------------------  289
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  80.0% (12/15)    IGHD3-10*01  12   -------------------------------------------------------------------------.....GG..G.....--  26
J  95.8% (46/48)    IGHJ5*02     4    ----------------------------------------------------------------------------------------..  5

                                      ----------->                                  
                                       W  F  D  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6760   271  TGGTTCGACCCCTGGGGCCGGGGAACCCTGGTCACTGTCTCCTCAG  316
J  95.8% (46/48)    IGHJ5*02     6    ...................A...............C..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_55725

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         358     4e-101
IGHD1-26*01                                                                                           10.3    123   
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ACCTCTTGGGCGAAAGGGATAG	GTGGG	TGGGT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACCTCTTGGGCGAAAGGGATAGGTGGGTGGGTCTGGTTCGCCCCC	ARTSWAKGIGGWVWFAP	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  V  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_6761     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAACCCCCAGGGAAGGGC  90
V  96.0% (239/249)  IGHV4-30-4*01  49   ..................A............G.................A........................G...............  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  C  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_6761     91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  96.0% (239/249)  IGHV4-30-4*01  139  ................A........................C................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  K  M  T  S  V  I  A  A  D  T  A  A  Y  Y  C  A  R  T  S  W  A  K  G  I 
                    Query_6761     181  AAGAACCAGTTCTCCCTGAAGATGACCTCTGTGATTGCCGCAGACACGGCCGCGTATTACTGTGCCAGAACCTCTTGGGCGAAAGGGATA  270
V  96.0% (239/249)  IGHV4-30-4*01  229  .....................C...G........C.................T................---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                        MGT-------------------->                                  
                                         G  G  W  V  W  F  A  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_6761     271  GGTGGGTGGGTCTGGTTCGCCCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  328
D  100.0% (5/5)     IGHD1-26*01    7    -.....----------------------------------------------------  11
J  95.7% (45/47)    IGHJ5*02       5    -----------........A..........................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_55724

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           378     3e-107
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTA	ACGATTT	ACATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACGATTTACATTATGGTATGGACGTC	ARVNDLHYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6762   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATTCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*01  49   ...................C................................................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 
                    Query_6762   91   CTGGAGTGGATCGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*01  139  ...........T..............................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  D  L  H  Y  G 
                    Query_6762   181  AAGAACCAGCTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTTAACGATTTACATTATGGT  270
V  98.4% (246/250)  IGHV4-31*01  229  .........T............................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   6    -------------------------------------------------------------------------.......----------  12
J  97.8% (44/45)    IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                       M  D  V  G  G  Q  G  T  T  V  T  V  S  S 
                    Query_6762   271  ATGGACGTCGGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  312
J  97.8% (44/45)    IGHJ6*02     21   .........T................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_87346

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD5-18*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	GTGGACACACCTATGG	AGCCCGAACCGACCCCCATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGGACACACCTATGGAGCCCGAACCGACCCCCATCTTGACTAC	ARRGHTYGARTDPHLDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  I  L  R  T  Y
                    Query_6763   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACATCCTTAGAACCTA  90
V  95.9% (278/290)  IGHV5-51*01  6    ....................C.............................A..........................G.T...CC.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_6763   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  95.9% (278/290)  IGHV5-51*01  96   ........G.................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  H  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6763   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACCACTCCATTAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (278/290)  IGHV5-51*01  186  ..................................A.G.....C...............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  A  R  R  G  H  T  Y  G  A  R  T  D  P  H  L  D  Y  W  G  Q  G  T  L  V  S  V
                    Query_6763   271  CATATATTACTGTGCGAGACGTGGACACACCTATGGAGCCCGAACCGACCCCCATCTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGT  360
V  95.9% (278/290)  IGHV5-51*01  276  ...G................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  87.5% (14/16)    IGHD5-18*01  1    --------------------.....T...G......------------------------------------------------------  16
J  97.6% (41/42)    IGHJ4*02     7    --------------------------------------------------------.............................A....  40

                                              
                                        S  S  
                    Query_6763   361  CTCCTCAG  368
J  97.6% (41/42)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_87347

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           308     4e-86
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGATACGCC	GAATA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGATACGCCGAATACTTCCAGCAC	ARLGSYYASTGYGRYAEYFQH	240	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	220	23	0	90.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E  
                    Query_6764   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAGT  93
V  90.5% (220/243)  IGHV4-59*08  50   .....TCC...A.............................A.................A........C.........A...........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  P  L  K  P  R  V  T  I  S  L  D  T  S  K  N  
                    Query_6764   94   GGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCCCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGTCCAAGAACC  183
V  90.5% (220/243)  IGHV4-59*08  140  ..A....G......T.......T.....................T........AG............A...G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------------CDR3-IM
                                      P  F  P  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G  
                    Query_6764   184  CGTTCCCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGTT  273
V  90.5% (220/243)  IGHV4-59*08  230  A....T......A......C..........................G.....C..........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  91.7% (11/12)    IGHD3-10*01  4    ----------------------------------------------------------------------........G...--------  15

                                      GT-------------------------->                                  
                                      Y  G  R  Y  A  E  Y  F  Q  H  W  G  H  G  P  Q  V  A  V  S  S  
                    Query_6764   274  ATGGCCGATACGCCGAATACTTCCAGCACTGGGGCCACGGCCCCCAGGTCGCCGTCTCCTCAG  336
J  91.8% (45/49)    IGHJ1*01     4    --------------.......................G...A...T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_126291

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6765   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (226/248)  IGHV3-21*01  47   ............................T............AG...C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  G  
                    Query_6765   91   AGTGGGTCTCATCCATCAGTAGTAGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  91.1% (226/248)  IGHV3-21*01  137  ................T........T...AGT......T.C..C..A......G..A..............................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_6765   181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  91.1% (226/248)  IGHV3-21*01  227  ....C..................AA...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6765   271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    --------------.......A.....................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_54459

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           346     2e-97
IGHD3-3*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	CGACGTTTACTAGTTCTTATTC	TGGAGTG	N/A	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGCGACGTTTACTAGTTCTTATTCTGGAGTGGACTAC	TTATFTSSYSGVDY	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	238	17	0	93.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  Q  F  S  F  S  D  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6766   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTCAATTCAGTTTCAGTGACGCCTGGATGAGCTGGGTCCGCCAGGCTCCCGGGAAGGGGCTGG  90
V  93.3% (238/255)  IGHV3-15*01  47   .......T............G........GG.....C.......A...............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  L  K  S  K  A  D  G  W  T  T  D  Y  A  A  P  V  K  G  R  F  I  I  S  R  D  
                    Query_6766   91   AGTGGGTTGGCCGTCTTAAAAGCAAAGCTGATGGTTGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCATCATCTCAAGAGATG  180
V  93.3% (238/255)  IGHV3-15*01  137  ..............A...........A........G.......................................C..............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      E  S  Q  N  T  L  F  L  Q  M  K  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  A  T  F  T  S  
                    Query_6766   181  AATCACAAAACACGCTGTTTCTGCAAATGAAGAGCCTGAAAACCGAGGACACAGCCGTATATTACTGCACCACAGCGACGTTTACTAGTT  270
V  93.3% (238/255)  IGHV3-15*01  227  .T...A............A............C..........................G........T.......---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 

                                      IMGT--------------->                                  
                                      S  Y  S  G  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6766   271  CTTATTCTGGAGTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (7/7)     IGHD3-3*01   14   -------.......----------------------------------------  20
J  100.0% (40/40)   IGHJ4*02     9    --------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_126293

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         383     1e-108
IGHD3-16*01                                                                                           12.2    35    
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	C	ATTATG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTATGACTACTTTGACTAC	AGHYDYFDY	290	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	70	4	0	94.6
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	46	5	0	90.2
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	104	10	0	91.2
CDR3-IMGT (germline)	290	295	6	5	1	0	83.3
Total	N/A	N/A	293	269	24	0	91.8


Alignments

                                        <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                           M  Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  R  G  F  G  Y  S  F  T  
                    Query_6767     3    AAATGCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGTTTTGGATACAGCTTTACCA  92
V  91.8% (269/293)  IGHV5-10-1*01  2    ..G.....................C.........................................A.....C.................  91
                                           V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  

                                        T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                        S  F  W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  V  G  R  I  D  P  F  D  S  S  T  D  Y  
                    Query_6767     93   GCTTCTGGATCACTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGGTGGGAAGAATTGATCCTTTTGACTCTTCTACCGACTATA  182
V  91.8% (269/293)  IGHV5-10-1*01  92   ...A........GC....................................A....G..G.........AG........A....A....C.  181
                                        S  Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  

                                        ----------------------------------------------FR3-IMGT------------------------------------
                                        T  P  S  F  Q  G  H  V  T  I  S  A  D  N  S  I  S  T  A  Y  L  H  L  S  S  L  K  A  S  D  
                    Query_6767     183  CGCCGTCATTCCAAGGCCACGTCACCATCTCAGCTGACAACTCCATCAGTACTGCCTACCTGCACTTGAGCAGCCTGAAGGCCTCGGACA  272
V  91.8% (269/293)  IGHV5-10-1*01  182  GC.....C................................G........C..............G.G.......................  271
                                        S  P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                        ----------------><--------CDR3-IMGT-------->                                  
                                        T  G  M  Y  Y  C  A  G  H  Y  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6767     273  CCGGCATGTATTACTGTGCGGGACATTATGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  91.8% (269/293)  IGHV5-10-1*01  272  ...C................A..-------------------------------------------------------  294
                                        T  A  M  Y  Y  C  A  R                                                        
D  100.0% (6/6)     IGHD3-16*01    3    ------------------------......------------------------------------------------  8
J  100.0% (48/48)   IGHJ4*02       1    ------------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_126295

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	221	24	6	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_6768   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.0% (221/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  V  S  V  D  T  S 
                    Query_6768   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCGTCTCAGTAGACACGTCC  180
V  88.0% (221/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A..............A.A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_6768   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.0% (221/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_6768   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_126294

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           361     4e-102
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TGGGCTTCAGTC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGCTTCAGTCCTTTGACTAC	ARDGLQSFDY	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	241	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  L  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6769   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGTAGTGGTGGTTATCTCTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (241/251)  IGHV4-31*03  49   ..................A......................C...........CTA..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  E  T  S 
                    Query_6769   91   CTGGAGTGGATTGGTTACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTTACCATATCACTAGAGACGTCT  180
V  96.0% (241/251)  IGHV4-31*03  139  ..............G.......A...................................A...................G....C......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  L  Q  S  F  D 
                    Query_6769   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGGGCTTCAGTCCTTTGAC  270
V  96.0% (241/251)  IGHV4-31*03  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  100.0% (44/44)   IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6769   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (44/44)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_126297

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           305     3e-85
IGHD3-10*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	GACCAAGG	GGTTCGGGGACTTA	CTGCAGCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGACCAAGGGGTTCGGGGACTTACTGCAGCCCTTTGACCAC	VRTKGFGDLLQPFDH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	221	26	0	89.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  T  S  G  F  T  L  S  S  S  T  T  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6770   1    GGTCCCTGAGACTCTCCTGTGAAACCTCTGGATTCACCTTGAGTAGTTCCACCACGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.5% (221/247)  IGHV3-21*01  47   .....................C.G................C.....C.AT.G..T...................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  T  S  G  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6770   91   AGTGGGTCGCATCTATTACTAGTGGAAGCACTTACATCTACTACGCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAACGCCA  180
V  89.5% (221/247)  IGHV3-21*01  137  ........T....C....G....A.T..T.G......A........................C...........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  L  S  G  L  R  V  E  D  T  A  V  Y  S  C  V  R  T  K  G  F  G  D  L  
                    Query_6770   181  AGAACTCACTGTTTCTGCAACTGAGTGGCCTGAGAGTCGAGGACACGGCTGTCTATTCCTGTGTGAGGACCAAGGGGTTCGGGGACTTAC  270
V  89.5% (221/247)  IGHV3-21*01  227  ............A.......A...ACA.........C...............G....A.....C...-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD3-10*01  11   ---------------------------------------------------------------------------..........G...-  24

                                      ---------------->                                  
                                      L  Q  P  F  D  H  W  G  Q  G  T  L  F  T  V  S  S  
                    Query_6770   271  TGCAGCCCTTTGACCACTGGGGCCAGGGAACCCTGTTCACCGTCTCCTCAG  321
J  95.5% (42/44)    IGHJ4*02     5    -------.......T....................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_126296

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            347     7e-98
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	264	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	77	27	22	5	0	81.5
FR2-IMGT	78	128	51	49	2	0	96.1
CDR2-IMGT	129	149	21	18	3	0	85.7
FR3-IMGT	150	263	114	103	11	0	90.4
CDR3-IMGT (germline)	264	270	7	6	1	0	85.7
Total	N/A	N/A	270	246	24	0	91.1


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  L  S  C  A  V  S  G  D  S  F  S  S  R  N  W  W  S  W  V  
                    Query_6771   1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCAGCTGCGCTGTCTCTGGTGACTCCTTCAGTAGTAGAAATTGGTGGAGTTGGGTCC  90
V  91.1% (246/270)  IGHV4-4*02   26   ................T...................C.................G....A....C.....T..C................  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  S  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  
                    Query_6771   91   GCCAGCCCCCCGGCAAGGGGCTGGAGTGGATTGGGGAAATCTCTCATAGTGGGACAACCAACTACAATCCGTCCCTCAAGAGTCGAGTCA  180
V  91.1% (246/270)  IGHV4-4*02   116  ..........A..G............................A...........GC...........C......................  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      S  I  S  L  D  K  S  K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  
                    Query_6771   181  GCATTTCATTGGACAAGTCCAAGAATCAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAG  270
V  91.1% (246/270)  IGHV4-4*02   206  C...A...G.A..............C...................G............C..............G..T..C...G......  295
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  

                                      ----CDR3-IMGT--------->                                  
                                      G  S  G  W  L  A  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6771   271  GTAGTGGGTGGCTGGCTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (8/8)     IGHD6-19*01  11   -------........------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    ----------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_54450

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD5-18*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGCCATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGCCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	240	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_6772   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAAAGACTGGAG  90
V  98.8% (240/243)  IGHV4-59*01  49   .........................................T......................................GG........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6772   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (240/243)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D 
                    Query_6772   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGCCATGGTTACGGAGGAGTTGAC  270
V  98.8% (240/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD5-18*01  6    ---------------------------------------------------------------......T........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6772   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_54452

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           427     1e-121
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGGACAC	TGTAGTAGTGCCATCTGCGATG	GACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTAC	ARHMGHCSSAICDGPDY	292	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	70	4	0	94.6
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	111	3	0	97.4
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	295	284	11	0	96.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  Q  K  P  G  E  A  L  K  I  S  C  K  G  S  G  Y  S  F  G  
                    Query_6773   5    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGCAAAAGCCGGGGGAGGCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCA  94
V  96.3% (284/295)  IGHV5-51*01  2    ....G...........................A.......C......T......................................AC..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_6773   95   GTTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  184
V  96.3% (284/295)  IGHV5-51*01  92   .C..........G.............................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  
                    Query_6773   185  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACA  274
V  96.3% (284/295)  IGHV5-51*01  182  .................................C.........C.................................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  M  Y  Y  C  A  R  H  M  G  H  C  S  S  A  I  C  D  G  P  D  Y  W  G  Q  G  T  L  V  
                    Query_6773   275  CCGCCATGTATTACTGTGCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTACTGGGGCCAGGGAACCCTGGTCA  364
V  96.3% (284/295)  IGHV5-51*01  272  .........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  86.4% (19/22)    IGHD2-2*01   8    -----------------------------------.........A...G....T...---------------------------------  29
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------.............................  36

                                                  
                                      T  V  S  S  
                    Query_6773   365  CCGTCTCCTCAG  376
J  100.0% (41/41)   IGHJ4*02     37   ............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_54453

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           272     2e-75
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ATTACTCTGGTTCGGGGA	AAAGTCAAGGATTTCGGAAAT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGATTACTCTGGTTCGGGGAAAAGTCAAGGATTTCGGAAATTGGCTCGACCCC	ARDRITLVRGKVKDFGNWLDP	246	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	23	7	0	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	97	17	0	85.1
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	212	38	0	84.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  I  S  D  G  G  Y  T  W  N  W  I  R  Q  H  P  Q  K  G  
                    Query_6774   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTCCATCAGTGATGGTGGTTATACCTGGAATTGGATCCGCCAGCACCCACAGAAGGGCC  93
V  84.8% (212/250)  IGHV4-31*02  50   .....TCC...A..................G.........CAG.........CTA.....GC..................GG........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  L  G  S  I  A  Y  S  G  R  A  D  Y  N  P  S  L  R  S  R  L  S  V  S  K  D  T  S  
                    Query_6774   94   TGGAGTGGCTTGGGTCCATCGCTTACAGTGGGAGAGCCGATTACAATCCGTCCCTCAGGAGTCGACTTTCCGTGTCGAAAGACACGTCTA  183
V  84.8% (212/250)  IGHV4-31*02  140  ........A......A....TA............CA..T.C.....C..........A.......G..A..A.A..AGT...........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  Q  V  S  L  N  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  I  T  L  V  R  
                    Query_6774   184  AGAACCAGGTCTCCCTTAACGTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTATTGTGCGAGAGATCGGATTACTCTGGTTCGGG  273
V  84.8% (212/250)  IGHV4-31*02  230  ........T.......G..GC...............................G.....C...........--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD3-10*01  3    --------------------------------------------------------------------------......A.........  18

                                      DR3-IMGT-------------------------->                                  
                                      G  K  V  K  D  F  G  N  W  L  D  P  W  G  Q  G  T  Q  V  I  V  T  S  
                    Query_6774   274  GAAAAGTCAAGGATTTCGGAAATTGGCTCGACCCCTGGGGCCAGGGAACCCAGGTCATCGTCACCTCAG  342
D  94.4% (17/18)    IGHD3-10*01  19   ..-------------------------------------------------------------------  20
J  91.3% (42/46)    IGHJ5*02     6    -----------------------...T........................T.....C....T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_54454

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATG	GTATTATTCTGATAACAGTGGTTATT	T	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATGGTATTATTCTGATAACAGTGGTTATTTCTTTGACTCC	AREWYYSDNSGYFFDS	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_6775   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGCCAGTCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...........................................G.....................G...C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  V  Y  Y  T  G  F  T  D  Y  N  P  S  L  K  S  R  I  T  I  S  L  D  T  S  K  N 
                    Query_6775   91   TGGCTTGGGTTTGTCTATTACACTGGATTCACCGACTACAACCCCTCCCTCAAGAGTCGAATCACCATATCACTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ...A......A.A.........G...GAG....A..........................G...........G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  W  Y  Y  S  D  N  S  G 
                    Query_6775   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGAATGGTATTATTCTGATAACAGTGGT  270
V  93.5% (229/245)  IGHV4-59*01  229  .............A.................................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (22/26)    IGHD3-22*01  1    --------------------------------------------------------------------......C.A.....GT......  22

                                      -------------->                                  
                                       Y  F  F  D  S  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_6775   271  TATTTCTTTGACTCCTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  319
D  84.6% (22/26)    IGHD3-22*01  23   ....---------------------------------------------  26
J  95.5% (42/44)    IGHJ4*02     5    -----........A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_54455

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           300     9e-84
IGHD2-15*01                                                                                           29.5    2e-04
IGHJ4*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-15*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCAGGGAGAG	TGTATTGGTGGTAGGTGCTAC	CCTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGAGCAGGGAGAGTGTATTGGTGGTAGGTGCTACCCTGCCTACTTTGACTTC	AREQGECIGGRCYPAYFDF	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  N  T  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6776   1    GGTCCCTGAGACTCTCCTGTGTCGCGTCTGGATTCACCTTCAATACGTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  88.4% (221/250)  IGHV3-33*01  47   .....................CA...................G..GC.A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  S  G  G  G  N  K  Y  Y  S  D  S  V  K  G  R  S  T  I  S  R  D  S  S  
                    Query_6776   91   AGTGGGTGGCGCTTATTTGGTCTGGCGGAGGTAATAAATATTATTCAGACTCCGTGAAGGGCCGATCCACCATCTCCAGAGACAGTTCCA  180
V  88.4% (221/250)  IGHV3-33*01  137  ..........AG....A....A..AT...A..........C...G.....................T.................A.....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      N  N  S  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  E  Q  G  E  C  I  G  
                    Query_6776   181  ACAATAGCCTCTCTCTCCAAATGAACAGCCTGCGAGCCGAGGACACGGCTATTTACTACTGTGCGCGAGAGCAGGGAGAGTGTATTGGTG  270
V  88.4% (221/250)  IGHV3-33*01  227  .G..C.CG..G.A...G...............A.................G.G..T.........A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD2-15*01  8    --------------------------------------------------------------------------------....G.....  17

                                      -IMGT----------------------->                                  
                                      G  R  C  Y  P  A  Y  F  D  F  W  G  H  G  T  L  V  S  V  S  S  
                    Query_6776   271  GTAGGTGCTACCCTGCCTACTTTGACTTCTGGGGCCACGGAACCCTGGTCTCCGTCTCCTCAG  333
D  90.5% (19/21)    IGHD2-15*01  18   ....C......----------------------------------------------------  28
J  93.6% (44/47)    IGHJ4*01     2    ----------------...........A.........A............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_54456

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           339     2e-95
IGHD2-15*01                                                                                           14.1    9.7  
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	GGCC	GGATATT	CATCTGATGGACGTGAATATATGACCCCGTTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGGGCCGGATATTCATCTGATGGACGTGAATATATGACCCCGTTGTTTGACTTT	SRAGYSSDGREYMTPLFDF	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	64	5	0	92.8
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	287	252	35	0	87.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I  N  Y 
                    Query_6777   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGACAATCTCCTGCCAGGCTTCCGGTTACAGTTTTATCAACTAC  91
V  87.8% (252/287)  IGHV1-18*04  7    .................................................AGG........A.......T.......CC....C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  P  H  K  G  N  T  K  Y  A  Q 
                    Query_6777   92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAGGGGCTCGAGTGGATGGGTTGGATCGGCCCGCACAAAGGTAACACAAAATATGCACAG  181
V  87.8% (252/287)  IGHV1-18*04  97   ........C.......................A.....T...........A......A..G.TT....T...........C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  H  L  D  V  R  N  L  R  S  D  D  T  A 
                    Query_6777   182  AGTTTCCAGGGCAGAGTCACGATGACCACAGACACATTGACGGGCACAGCTCACCTGGACGTGAGGAACCTGCGATCTGACGACACGGCC  271
V  87.8% (252/287)  IGHV1-18*04  187  .AGC................C................CC...A.......CT..A....GC......G....A.................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  S  R  A  G  Y  S  S  D  G  R  E  Y  M  T  P  L  F  D  F  W  G  Q  G  T  P  V 
                    Query_6777   272  GTCTATTACTGTTCGAGGGCCGGATATTCATCTGATGGACGTGAATATATGACCCCGTTGTTTGACTTTTGGGGCCAGGGAACCCCGGTC  361
V  87.8% (252/287)  IGHV1-18*04  277  ..G.........G....-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  100.0% (7/7)     IGHD2-15*01  2    ---------------------.......--------------------------------------------------------------  8
J  90.7% (39/43)    IGHJ4*02     6    ------------------------------------------------------------.......AC................T....  35

                                                   
                                       S  V  S  S  
                    Query_6777   362  TCCGTCTCCTCAG  374
J  90.7% (39/43)    IGHJ4*02     36   A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_54457

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           374     7e-106
IGHD3-3*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	242	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6778   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (242/245)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_6778   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.8% (242/245)  IGHV4-34*01  139  .........................................................................T................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_6778   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  98.8% (242/245)  IGHV4-34*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6778   271  GCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_191658

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           388     5e-110
IGHD4-17*01                                                                                           21.8    0.046 
IGHJ2*01                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCC	CTACGGTGACT	TACCCCCT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCCCTACGGTGACTTACCCCCTTACTGGTACTTCGATCTC	ARGPYGDLPPYWYFDL	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	268	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  S  S  H
                    Query_6779   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTTCCAGCCA  90
V  93.1% (268/288)  IGHV5-51*01  6    .................................................................G............C...A.....T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_6779   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGACACCAGATACAGCCC  180
V  93.1% (268/288)  IGHV5-51*01  96   ...........................................................................T..............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  E  Q  V  N  L  S  V  E  K  S  I  T  T  A  Y  L  Q  W  T  S  L  R  P  S  D  T  G
                    Query_6779   181  GCCCTTCCAAGAACAGGTCAACCTTTCAGTCGAAAAGTCCATCACCACCGCCTACCTGCAGTGGACCAGCCTGAGGCCCTCGGACACCGG  270
V  93.1% (268/288)  IGHV5-51*01  186  .T.........GC.......C.A.C....C...C..........G....................G........A.G............C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        I  Y  Y  C  A  R  G  P  Y  G  D  L  P  P  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S
                    Query_6779   271  CATATACTACTGTGCGAGGGGCCCCTACGGTGACTTACCCCCTTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTC  360
V  93.1% (268/288)  IGHV5-51*01  276  ...G..T...........------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  100.0% (11/11)   IGHD4-17*01  4    ------------------------...........-------------------------------------------------------  14
J  100.0% (50/50)   IGHJ2*01     2    -------------------------------------------...............................................  48

                                         
                                        S
                    Query_6779   361  CTC  363
J  100.0% (50/50)   IGHJ2*01     49   ...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_195189

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           343     2e-96
IGHD2-21*01                                                                                           14.1    8.8  
IGHJ4*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATGGAATTG	GGTAGTGTTTGCT	TGTACCTCCTGTCGCCATCCAAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATGGAATTGGGTAGTGTTTGCTTGTACCTCCTGTCGCCATCCAATTTTGACTGC	ARMELGSVCLYLLSPSNFDC	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  Y  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6780   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTTACTATACCATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (233/247)  IGHV3-21*01  47   ....................................C.......AG.....G....A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  S  S  S  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6780   91   AGTGGGTCTCATCCATCAGCGGTAGTAGTAGTTCCATCTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.3% (233/247)  IGHV3-21*01  137  ................T..TA............A...A....................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  V  Q  L  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  M  E  L  G  S  V  C  
                    Query_6780   181  AGAACTCACTGTATGTGCAACTGAATAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGGATGGAATTGGGTAGTGTTTGCT  270
V  94.3% (233/247)  IGHV3-21*01  227  ..............C.....A....C..........C..............................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  84.6% (11/13)    IGHD2-21*01  11   -----------------------------------------------------------------------------...G...A.....  23

                                      R3-IMGT------------------------>                                
                                      L  Y  L  L  S  P  S  N  F  D  C  W  G  Q  G  T  Q  F  T  L  P  S
                    Query_6780   271  TGTACCTCCTGTCGCCATCCAATTTTGACTGCTGGGGCCAGGGAACCCAGTTCACCCTCCCCTC  334
J  87.8% (36/41)    IGHJ4*02     6    -----------------------.......A.................T.G.....G..T....  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_73953

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-10*01                                                                                           14.1    8.2   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGAGA	TCGGGGA	AG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGAGATCGGGGAAGACTACTTTAACTAC	ARAEIGEDYFNY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6781   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_6781   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCATTAGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ...............T......A.......................................................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  A  S  A  V  Y  Y  C  A  R  A  E  I  G  E  D  Y 
                    Query_6781   181  AAGAACCAGTTCTCCCTGCAGCTCAGCTCTGTGACTGCCGCGGCCTCGGCCGTTTATTACTGTGCGAGAGCCGAGATCGGGGAAGACTAC  270
V  96.4% (241/250)  IGHV4-31*03  229  ..................A....G...................A.A.......G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-10*01  14   ----------------------------------------------------------------------------.......-------  20
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  N  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6781   271  TTTAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    ...G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_191653

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         349     2e-98
IGHD5-12*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGAGGAT	TGGCTACGA	GCCCCCCTTTGCCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGCCCCCCTTTGCCCTC	ARAGRIGYEPPFAL	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_6782     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTACTCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  95.1% (235/247)  IGHV4-38-2*02  49   ................................................T.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K 
                    Query_6782     91   GAGTGGATTGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAG  180
V  95.1% (235/247)  IGHV4-38-2*02  139  ......................A.........C.........A..............A........................C.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  Q  F  S  L  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  P 
                    Query_6782     181  AACCAGTTCTCGTTGAATCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGAGCGGGGAGGATTGGCTACGAGCCC  270
V  95.1% (235/247)  IGHV4-38-2*02  229  ...........CC....G....G...........C...............G................-----------------------  295
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD5-12*01    11   -----------------------------------------------------------------------------.........----  19

                                        ----------->                                  
                                         P  F  A  L  W  G  Q  G  P  L  V  T  V  S  S  
                    Query_6782     271  CCCTTTGCCCTCTGGGGCCAGGGACCCCTGGTCACCGTCTCCTCAG  316
J  97.1% (34/35)    IGHJ4*02       14   -----------.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_191651

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           414     6e-118
IGHD6-19*01                                                                                           19.9    0.18  
IGHJ4*01                                                                                              50.7    2e-10 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-19*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGTTCCCTTAGGGTCTAC	AGCAGTGGGTGGT	GGGCTCGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGTTCCCTTAGGGTCTACAGCAGTGGGTGGTGGGCTCGCCTAC	ASVPLGSTAVGGGLAY	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	9	77	69	69	0	0	100
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	295	5	5	0	0	100
Total	N/A	N/A	287	276	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_6783   9    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAATTAT  98
V  96.2% (276/287)  IGHV1-18*01  7    .....................................................................................GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  V  F  N  G  N  T  R  H  A  L 
                    Query_6783   99   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCAGCGTTTTCAATGGTAACACAAGACATGCACTG  188
V  96.2% (276/287)  IGHV1-18*01  97   ........C.........................................A..........C..A..............ACT......A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  N  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_6783   189  AAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAACACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  278
V  96.2% (276/287)  IGHV1-18*01  187  ...........................................G..............................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  S  V  P  L  G  S  T  A  V  G  G  G  L  A  Y  W  G  H  G  S  L  V  I  V  P 
                    Query_6783   279  GTGTATTACTGTGCGAGCGTTCCCTTAGGGTCTACAGCAGTGGGTGGTGGGCTCGCCTACTGGGGCCACGGAAGCCTGGTCATCGTCCCC  368
V  96.2% (276/287)  IGHV1-18*01  277  .................-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  92.3% (12/13)    IGHD6-19*01  7    -----------------------------------........C....------------------------------------------  19
J  89.5% (34/38)    IGHJ4*01     11   --------------------------------------------------------............A....C........C....T..  44

                                          
                                       S  
                    Query_6783   369  TCAG  372
J  89.5% (34/38)    IGHJ4*01     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_191650

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           329     3e-92
IGHD6-25*01                                                                                           12.2    31   
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-25*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGGG	GCATCGGCT	GAGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGGGCATCGGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
Total	N/A	N/A	242	226	16	0	93.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6784   1    GGTCCCTGAGACTCTCCTGTGTAGCGTCTGGATTCACATTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.4% (226/242)  IGHV3-33*03  47   .....................C...............C..C.....C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  T  K  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_6784   91   AGTGGGTGGCAGTTATATGGTATGATGGAACTAAAAAATACTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCA  180
V  93.4% (226/242)  IGHV3-33*03  137  ..............................G...T..........C.....................................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_6784   181  AGAACACCCTGTTTTTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTCTATATTATTGTACAGGGGCATCGGCTGAGGGGTGGTTCG  270
V  93.4% (226/242)  IGHV3-33*03  227  .......G....A.C.....................C.............G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  88.9% (8/9)      IGHD6-25*01  8    --------------------------------------------------------------------...G.....-------------  16
J  97.8% (45/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  V  Q  G  T  L  V  T  V  S  S  
                    Query_6784   271  ACCCCTGGGTCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.8% (45/46)    IGHJ5*02     13   .........G.............................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_191655

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           433     1e-123
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	74	0	0	100
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	285	8	0	97.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_6785   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCA  91
V  97.3% (285/293)  IGHV5-51*03  2    ..................................................................................C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_6785   92   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  181
V  97.3% (285/293)  IGHV5-51*03  92   G.........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  M  S  V  D  E  S  V  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_6785   182  GTCCGTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCGTCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  97.3% (285/293)  IGHV5-51*03  182  .C..........................C....C....A.....A............A................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_6785   272  CCGCCATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  361
V  97.3% (285/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)   IGHD6-19*01  4    --------------------------------------...............-------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   --------------------------------------------------------..................................  45

                                         
                                      S  
                    Query_6785   362  CAG  364
J  100.0% (37/37)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_191654

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	CGTGCAGGGGTCGTTA	TACGATTTTTGGAGTGG	GTTCCTGGGA	CCCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACGTGCAGGGGTCGTTATACGATTTTTGGAGTGGGTTCCTGGGACCC	ANVQGSLYDFWSGFLGP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  Y  T  F  R  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6786   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATACACCTTTAGAAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (230/247)  IGHV3-23*01  47   .................................T.........C..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  S  G  S  N  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6786   91   AGTGGGTCTCAGTTATTAGTGGTAGTGGAAGTAACATATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  93.1% (230/247)  IGHV3-23*01  137  ............C...............TG...G..C................................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  S  A  I  Y  Y  C  A  N  V  Q  G  S  L  Y  D  
                    Query_6786   181  GGAATACCCTGTATCTTCAAATGAATACCCTGAGAGCCGAGGACTCGGCCATATATTACTGTGCGAACGTGCAGGGGTCGTTATACGATT  270
V  93.1% (230/247)  IGHV3-23*01  227  A...C..G........G........C.G................A.....G................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (17/17)   IGHD3-3*01   5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                      F  W  S  G  F  L  G  P  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_6786   271  TTTGGAGTGGGTTCCTGGGACCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  327
D  100.0% (17/17)   IGHD3-3*01   12   ..........-----------------------------------------------  21
J  97.3% (36/37)    IGHJ5*02     15   --------------------................C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_49188

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           300     8e-84
IGHD3-10*01                                                                                           10.3    118  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTGTTGATGGCAACCA	ATTAT	N/A	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTCGAGACCTGTTGATGGCAACCAATTAT	TRDLLMATNY	249	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	24	6	0	80
FR3-IMGT	135	248	114	100	14	0	87.7
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	224	32	0	87.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  V  S  G  F  N  F  A  D  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6787   1    GGTCCCTGAGACTCTCCTGTACAGTCTCTGGGTTCAATTTTGCTGACTTTGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.5% (224/256)  IGHV3-49*04  47   ........................CT.....A....CC....G...T.A...T.....C...............................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  K  R  T  A  Y  G  A  T  T  D  Y  A  A  S  V  K  G  R  F  S  I  S  R  D  
                    Query_6787   91   AGTGGGTAGGCTTCATCAAAAGGACAGCTTATGGGGCGACAACAGACTACGCCGCGTCTGTGAAAGGCAGATTCAGCATTTCAAGAGATG  180
V  87.5% (224/256)  IGHV3-49*04  137  ..........T.....T.G...C.A.........T.G.........A............................C...C..........  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--
                                      D  S  R  G  V  S  Y  L  Q  M  N  S  L  K  I  E  D  T  A  T  Y  Y  C  T  R  D  L  L  M  A  
                    Query_6787   181  ATTCCAGAGGCGTCTCCTATTTACAAATGAACAGCCTGAAAATCGAGGACACAGCCACATACTACTGTACTCGAGACCTGTTGATGGCAA  270
V  87.5% (224/256)  IGHV3-49*04  227  ......A.A..A..G.....C.G...................C.............GTG..T.........A....--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 

                                      ------->                                  
                                      T  N  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6787   271  CCAATTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
D  100.0% (5/5)     IGHD3-10*01  24   ---.....----------------------------------  28
J  100.0% (34/34)   IGHJ4*02     15   --------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_49189

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     7e-98
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	TACTATAATCCTAGTGGTTATTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACTATAATCCTAGTGGTTATTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGYYGYWYFDL	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	233	11	0	95.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E  
                    Query_6788   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  95.5% (233/244)  IGHV4-59*01  50   .....TCC...A....C..........................................A..............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  I  S  K  N  
                    Query_6788   94   GGATTGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGATATCTCCAAGAACC  183
V  95.5% (233/244)  IGHV4-59*01  140  .......G....................................................................C.CG..........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  Y  Y  
                    Query_6788   184  AGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACTACTATAATCCTAGTGGTTATTACG  273
V  95.5% (233/244)  IGHV4-59*01  230  ..................G.............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  87.5% (21/24)    IGHD3-22*01  5    -----------------------------------------------------------------......G..AG.............-  28

                                      ------------------->                                  
                                      G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6788   274  GGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  327
J  100.0% (52/52)   IGHJ2*01     2    --....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_49182

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            313     1e-87
IGHD2-15*01                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	GTGGTA	CGCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACGTGGTACGCGGGGTTTTGACTAC	ARHLGTRGTRGFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	22	2	3	81.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	246	225	18	3	91.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_6789   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  87
V  91.5% (225/246)  IGHV4-4*02   49   ...............................G.....T........GTA.......................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  R  I  G  E  T  Y  H  S  G  S  T  N  Y  T  P  S  L  K  S  R  V  I  I  S  L  D  T  S  K 
                    Query_6789   88   GAGAGGATTGGGGAAACCTATCACAGTGGGAGCACCAACTACACCCCGTCCCTCAAGAGTCGAGTTATCATATCACTAGACACGTCCAAG  177
V  91.5% (225/246)  IGHV4-4*02   139  ...T............T......T...................A.....................C.C.......G......A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  G  L  N  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  R  G  T  R 
                    Query_6789   178  AATCAGTTCTCCCTGGGTCTCAACTCTTTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACGTGGTACGCGG  267
V  91.5% (225/246)  IGHV4-4*02   229  ..C............AAG..G.G....G......................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-15*01  15   -------------------------------------------------------------------------------......-----  20

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_6789   268  GGTTTTGACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  313
J  97.7% (42/43)    IGHJ4*02     6    ---.........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_49183

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           315     5e-88
IGHD1-20*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGAATACAA	GTATAAC	GGAATAGGG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGAATACAAGTATAACGGAATAGGGATGGACGTC	TRSEYKYNGIGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  E  S  R  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6790   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCGGGGTTCACCGAAAGTAGGAATTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  91.0% (223/245)  IGHV3-53*01  47   ............................T..........TC.....C..C.......G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  M  
                    Query_6790   91   AGTGGGTCTCAGTTATTTATAGTGGTGGTACCACACACTACGCAGATTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCATGA  180
V  91.0% (223/245)  IGHV3-53*01  137  ......................C.......G....T..........C..C...........A.........................A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      T  T  L  F  L  Q  M  N  S  L  R  A  E  D  S  A  V  Y  Y  C  T  R  S  E  Y  K  Y  N  G  I  
                    Query_6790   181  CCACATTGTTTCTTCAAATGAACAGTTTGAGAGCCGAGGACTCGGCCGTGTATTACTGTACGAGATCAGAATACAAGTATAACGGAATAG  270
V  91.0% (223/245)  IGHV3-53*01  227  A...GC...A...............CC..............A.................G.....-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD1-20*01  2    ----------------------------------------------------------------------------.......-------  8

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6790   271  GGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (42/42)   IGHJ6*02     21   --..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_49184

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTCG	TATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCGTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6791   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_6791   91   CTGGAGTGGATTGGGTTCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTTCCATATCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ................A.................G..................................A..........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  K  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  S  Y  G  S  G 
                    Query_6791   181  AAGAACAAGTTCTCCCTGAAGCTGACCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTCGTATGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  ......C..................G............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (21/21)   IGHD3-10*01  8    ------------------------------------------------------------------------------............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6791   271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (21/21)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_49185

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*04                                                                                           367     6e-104
IGHD1-26*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*04	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GA	GGTGTAGTGGGAGC	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTAT	ARGGVVGAPFDY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	70	5	0	93.3
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	18	6	0	75
FR3-IMGT	175	288	114	100	14	0	87.7
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	265	30	0	89.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  Q  P  G  S  S  V  K  V  S  C  K  S  S  G  G  S  F  S 
                    Query_6792   1    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGCAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGAGTTCTGGAGGTAGTTTCAGC  90
V  89.8% (265/295)  IGHV1-69*04  1    ...........G...........G............A................................GC.........C.CC......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  A  V  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  M  P  L  F  G  I  P  T  Y 
                    Query_6792   91   AGCTATGCTGTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGTATCATGCCTCTGTTTGGCATACCAACGTAC  180
V  89.8% (265/295)  IGHV1-69*04  91   .........A.................................................G.....C...A.CC....T...G...AC...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  I  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  G  K  L  Q  G  R  V  T  I  T  A  D  A  S  T  R  T  A  Y  M  E  L  S  S  L  R  S  G  D 
                    Query_6792   181  GCAGGGAAGTTGCAGGGCAGAGTCACAATAACCGCGGACGCATCCACGAGGACAGCCTACATGGAGTTGAGCAGCCTGAGATCTGGGGAC  270
V  89.8% (265/295)  IGHV1-69*04  181  ...CA......C..............G..T.........AA.........C...............C..................A....  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  I  Y  Y  C  A  R  G  G  V  V  G  A  P  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_6792   271  ACGGCCATTTATTACTGTGCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTATTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  358
V  89.8% (265/295)  IGHV1-69*04  271  ......G.G................---------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                 
D  92.9% (13/14)    IGHD1-26*01  1    ---------------------------...A..........-----------------------------------------------  14
J  95.5% (42/44)    IGHJ4*02     5    --------------------------------------------.........C............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_49186

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           357     1e-100
IGHD3-3*01                                                                                            21.8    0.041 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGCCTCGTGCCTG	GGAGTGGTTAT	GAAGCCATACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGCCTCGTGCCTGGGAGTGGTTATGAAGCCATACCTGACTAC	AKSLVPGSGYEAIPDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6793   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTTAGCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-23*01  47   ......................................T..................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  D  T  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6793   91   AATGGGTCTCAGGTATTAGTGGTAGTGGTGGTGACACATACTACGCAGACGCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (238/248)  IGHV3-23*01  137  .G..........C...................AG................T.......................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  F  C  A  K  S  L  V  P  G  S  G  
                    Query_6793   181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTATATTTCTGTGCGAAAAGCCTCGTGCCTGGGAGTGGTT  270
V  96.0% (238/248)  IGHV3-23*01  227  ...A................................C....................A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD3-3*01   15   ---------------------------------------------------------------------------------.........  23

                                      T------------------>                                
                                      Y  E  A  I  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6793   271  ATGAAGCCATACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  322
D  100.0% (11/11)   IGHD3-3*01   24   ..--------------------------------------------------  25
J  100.0% (39/39)   IGHJ4*02     8    -------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_49187

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           327     9e-92
IGHD2-15*01                                                                                           14.1    8.8  
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGAGCACTTCGCGATTAAGTATGA	TGCTACT	GGTCCCGATAGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGAGCACTTCGCGATTAAGTATGATGCTACTGGTCCCGATAGTTACTTTGACTAC	ARGEHFAIKYDATGPDSYFDY	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  A  W  I  R  Q  P  P  G  M  G  L  E 
                    Query_6794   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGGCCTGGATCCGCCAGCCCCCTGGGATGGGACTGGAA  90
V  92.7% (227/245)  IGHV4-34*01  49   ......................................................AG..................A....A...G.....G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  G  R  V  T  M  S  V  D  T  S  K  N 
                    Query_6794   91   TGGATTGGCGAAATCAATCATAGTGGAAGCACCAATTACAACCCGTCCCTCAAGGGCCGAGTCACGATGTCAGTGGACACGTCCAAAAAT  180
V  92.7% (227/245)  IGHV4-34*01  139  ........G..........................C..................A.T........C..A.....A...........G..C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  G  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  E  H  F  A  I  K  Y  D 
                    Query_6794   181  CAGTTCTCCCTGGGACTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCGAGCACTTCGCGATTAAGTATGAT  270
V  92.7% (227/245)  IGHV4-34*01  229  ............AAG..................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD2-15*01  23   -----------------------------------------------------------------------------------------.  23

                                      MGT-------------------------->                                  
                                       A  T  G  P  D  S  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6794   271  GCTACTGGTCCCGATAGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  100.0% (7/7)     IGHD2-15*01  24   ......----------------------------------------------------------  29
J  100.0% (46/46)   IGHJ4*02     3    ------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_227305

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           410     1e-116
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	46	5	0	90.2
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	291	3	3	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_6795   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCA  91
V  95.2% (276/290)  IGHV5-51*01  2    ......................................................A...............T...................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  T  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_6795   92   CCTACTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCTTGGAGTTGACGGGGATCATCTATCCTGGTGACTCTGACACCAGATACA  181
V  95.2% (276/290)  IGHV5-51*01  92   G.........................A.......G......C......G..T...........................T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  N  T  A  Y  L  Q  W  S  T  L  K  A  S  D  
                    Query_6795   182  GTCCGTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACA  271
V  95.2% (276/290)  IGHV5-51*01  182  .C......................C...................A...G.......................G.................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                 
                                      T  A  M  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  P  G  T  L  V  T  G  S  S 
                    Query_6795   272  CCGCCATGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCCGGGAACCCTGGTCACCGGCTCCTCA  357
V  95.2% (276/290)  IGHV5-51*01  272  ....................------------------------------------------------------------------  291
                                      T  A  M  Y  Y  C  A                                                                   
D  88.9% (8/9)      IGHD6-13*01  4    -------------------------...A.....----------------------------------------------------  12
J  95.0% (38/40)    IGHJ4*02     8    ----------------------------------------------..............A.................T.......  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_227306

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           367     6e-104
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CCGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	AGPSSASGWHFDN	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	262	27	0	90.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_6796   1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCAGTTA  90
V  90.7% (262/289)  IGHV5-51*03  6    .........................G.............G.........................G.........C.GC..T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  D  I  R  Y  S  P
                    Query_6796   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGATATTAGATATAGTCC  180
V  90.7% (262/289)  IGHV5-51*03  96   C.......G..................................................AT...GG...........CC.....C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  G  S  L  K  A  S  D  P  G
                    Query_6796   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGGGCAGCCTGAAGGCCTCGGACCCCGG  270
V  90.7% (262/289)  IGHV5-51*03  186  .............................C..A.AA........G...................A....................A...C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  G  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6796   271  CATGTATTACTGTGCGGGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  90.7% (262/289)  IGHV5-51*03  276  ................A..-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_317529

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD4-4*01                                                                                            16.1    2.2   
IGHJ3*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-4*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGGAAGACA	GACTACAG	C	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGGAAGACAGACTACAGCGATGCTTTTGATATG	AWKTDYSDAFDM	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	238	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6797   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.7% (238/246)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  Y  T  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  M  S 
                    Query_6797   91   CTGGAGTGGATTGGCTACATCTCTTACACTGGGAGAACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACATGTCT  180
V  96.7% (238/246)  IGHV4-31*03  139  ..............G.......A.....G......C.................................................C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  W  K  T  D  Y  S  D  A 
                    Query_6797   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACGGCCGCGGACACGGCCGTCTATTACTGTGCGTGGAAGACAGACTACAGCGATGCT  270
V  96.7% (238/246)  IGHV4-31*03  229  ...................A...............T.................G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (8/8)     IGHD4-4*01   2    ---------------------------------------------------------------------------........-------  9
J  98.0% (48/49)    IGHJ3*02     2    ------------------------------------------------------------------------------------......  7

                                      -------->                                  
                                       F  D  M  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6797   271  TTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  313
J  98.0% (48/49)    IGHJ3*02     8    ........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_317528

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           408     4e-116
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  R  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_6798   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAGGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACACCTTTACCAGCTA  90
V  95.2% (275/289)  IGHV5-51*03  6    ................................A.................................T..........G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_6798   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.2% (275/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_6798   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.2% (275/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6798   271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.2% (275/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_6798   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_227303

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           322     2e-90
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAAC	TATTACTATGGTTCGGGG	GCCCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAACTATTACTATGGTTCGGGGGCCCATTTTGACTAC	ARGNYYYGSGAHFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	41	10	0	80.4
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  G  G  F  Y  W  R  W  V  R  P  H  P  R  K  G 
                    Query_6799   1    ACCCTGTCCCTCACCTGCACTGTTTCTGGTGGCTCCATTAAGAGTGGCGGTTTCTACTGGAGGTGGGTTCGCCCGCACCCCCGGAAGGGG  90
V  91.2% (228/250)  IGHV4-31*01  49   .......................C..............C.GC.....T....A.........C...A.C....A......AG.......C  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       P  G  W  I  G  F  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  P 
                    Query_6799   91   CCGGGGTGGATTGGGTTCATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACCCCT  180
V  91.2% (228/250)  IGHV4-31*01  139  .T..A...........A.....................................................................GT..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  R  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  N  Y  Y  Y  G  S 
                    Query_6799   181  AAGAACCGGTTCTCCCTGAAGTTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGAACTATTACTATGGTTCG  270
V  91.2% (228/250)  IGHV4-31*01  229  .......A.............C...GC...........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (18/18)   IGHD3-10*01  2    ---------------------------------------------------------------------------...............  16

                                      ----------------->                                  
                                       G  A  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6799   271  GGGGCCCATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (18/18)   IGHD3-10*01  17   ...-------------------------------------------------  19
J  100.0% (43/43)   IGHJ4*02     6    ---------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_227302

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD3-3*01                                                                                            10.3    115   
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGCGGAAA	GATTT	C	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGCGGAAAGATTTCCTACTTTGACTAC	ARRGKISYFDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	235	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  H  G  S  I  S  G  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_6800   1    ACCCTGTCCCTCACCTGCACTGTCTCTCATGGCTCCATCAGTGGTTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  96.7% (235/243)  IGHV4-59*01  49   ...........................GG.............A...A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  G  T  M  S  V  D  T  S  K  N 
                    Query_6800   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGGCACCATGTCAGTAGACACGTCCAAGAAC  180
V  96.7% (235/243)  IGHV4-59*01  139  .............................................................T......A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  K  I  S  Y  F  D  Y 
                    Query_6800   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGACGCGGAAAGATTTCCTACTTTGACTAC  270
V  96.7% (235/243)  IGHV4-59*01  229  ...................G...........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-3*01   8    -----------------------------------------------------------------------.....--------------  12
J  97.9% (46/47)    IGHJ4*02     2    -----------------------------------------------------------------------------.............  14

                                                                        
                                       W  G  L  G  T  L  V  T  V  S  S  
                    Query_6800   271  TGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  304
J  97.9% (46/47)    IGHJ4*02     15   .......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_31284

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           305     3e-85
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCGG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGGAACTGGTTCGACCCC	ARGGWRRQRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	220	25	0	89.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  F  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_6801   1    ACCCTGTCCCTCACCTGCGCTGTGTTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  89.8% (220/245)  IGHV4-34*01  49   .......................C.A..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  T  R  Y  N  P  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_6801   91   TGGATTGGGGAAATCAGTCATAGTGGAAGTACGAGGTACAACCCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAG  180
V  89.8% (220/245)  IGHV4-34*01  139  ................A............C..C.AC.........T......A...............A....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W 
                    Query_6801   181  CAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTACTGTGCGCGAGGGGGCTGGCGAAGACAGCGGAACTGG  270
V  89.8% (220/245)  IGHV4-34*01  229  ..GT...........C..A......T.....................G............A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6801   271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (48/49)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_317524

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           343     2e-96
IGHD6-19*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGCA	TGACAG	AGTGGCTGG	GTGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATGACAGAGTGGCTGGGTGGTTTGACTAC	ARHDRVAGWFDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_6802   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  94.7% (232/245)  IGHV4-59*08  49   ......................................C.G......................................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  S  T  N  Y  N  P  S  L  N  S  R  V  A  I  S  V  D  A  S  K  K 
                    Query_6802   91   TGGATTGGGTATATCTTTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAATAGTCGAGTCGCCATATCTGTAGACGCGTCCAAGAAG  180
V  94.7% (232/245)  IGHV4-59*08  139  ................A....................................G.........A.......A......A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  H  D  R  V  A  G  W  F  D 
                    Query_6802   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACGGCCGCAGACACGGCCGTGTATTTCTGCGCGAGGCATGACAGAGTGGCTGGGTGGTTTGAC  270
V  94.7% (232/245)  IGHV4-59*08  229  .............................C......................A...T.....A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-19*01  10   -----------------------------------------------------------------------.........----------  18
J  95.3% (41/43)    IGHJ4*02     6    ------------------------------------------------------------------------------------......  11

                                      -->                                  
                                       Y  W  G  Q  G  S  R  V  T  V  S  S  
                    Query_6802   271  TACTGGGGCCAGGGATCCCGGGTCACCGTCTCCTCAG  307
J  95.3% (41/43)    IGHJ4*02     12   ...............A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_31286

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     4e-93
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTGTACGAGGCGACTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATGTGTACGAGGCGACTCATCAATATAGTGGCTACATGATTAATGACTAC	GKDVYEATHQYSGYMINDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6803   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAAGTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-23*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  E  S  G  A  S  T  N  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6803   91   AATGGGTCTCAGGTATCAGTGAGAGCGGTGCTAGCACAAATCACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.4% (231/250)  IGHV3-23*01  137  .G..........C...T....GT..T....G.......T.CT......................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  I  S  L  T  V  E  D  T  A  V  Y  Y  C  G  K  D  V  Y  E  A  T  H  
                    Query_6803   181  AGAACACACTGTATCTGCAAATGATCAGCCTGACAGTCGAGGACACGGCCGTATATTATTGTGGGAAAGATGTGTACGAGGCGACTCATC  270
V  92.4% (231/250)  IGHV3-23*01  227  .......G................A........G..C.....................C....C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6803   271  AATATAGTGGCTACATGATTAATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_31287

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            372     2e-105
IGHD3-10*01                                                                                           12.2    32    
IGHJ3*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCC	GGGAGT	GTGTGGGGGGGCC	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGCCGGGAGTGTGTGGGGGGGCCATGGTTTTGATATC	ARDAGSVWGGHGFDI	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	243	5	0	98


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  S  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_6804   1    ACCCTGTCCCTCACCTGCGCTGTCTCTAGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  98.0% (243/248)  IGHV4-4*02   49   ...........................G..............................................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  K  S  G 
                    Query_6804   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACAAGTCCGGG  180
V  98.0% (243/248)  IGHV4-4*02   139  .......................................................................A...............AA.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  D  A  G  S  V  W  G  G 
                    Query_6804   181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCATGTATTACTGTGCGAGAGATGCCGGGAGTGTGTGGGGGGGC  270
V  98.0% (243/248)  IGHV4-4*02   229  ................................................G...................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  17   ------------------------------------------------------------------------......------------  22

                                      -------------->                                  
                                       H  G  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6804   271  CATGGTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  319
J  97.9% (47/48)    IGHJ3*02     3    -...C............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_317521

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     2e-95
IGHD3-10*01                                                                                           10.3    117  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_6805   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-21*01  47   ............................................AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  E  Y  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_6805   91   AGTGGGTCTCATCCATTAGTAGTACTAGTGAATACATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  93.6% (233/249)  IGHV3-21*01  137  ........................G....AGT........C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_6805   181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTT  270
V  93.6% (233/249)  IGHV3-21*01  227  ............A......A..............................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6805   271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_31281

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	216	29	0	88.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_6806   1    ACCCTGTCCCTCACCTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  88.2% (216/245)  IGHV4-34*01  49   .......................CTA..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_6806   91   TGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAA  180
V  88.2% (216/245)  IGHV4-34*01  139  ................A............CA.C.AC......C..T......A...............A....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W 
                    Query_6806   181  CAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCTGGCGAAGACAGCGCAACTGG  270
V  88.2% (216/245)  IGHV4-34*01  229  ..GT...........C..A......T.....................G.....C......A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (49/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------.......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6806   271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (49/50)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_31282

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	102	12	0	89.5
CDR3-IMGT (germline)	289	291	3	3	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_6807   2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTCAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCA  91
V  93.1% (270/290)  IGHV5-51*01  2    ..G.................................................G.................T...................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  V  P  G  K  G  P  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_6807   92   CCTACTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCCGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  181
V  93.1% (270/290)  IGHV5-51*01  92   G.........................A.......G.......T.....G.........................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  I  I  S  A  D  T  S  V  N  T  A  Y  L  Q  W  S  P  L  G  A  S  D  
                    Query_6807   182  GTCCGTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACACGTCCGTCAACACCGCCTACCTGCAGTGGAGCCCCCTGGGGGCCTCCGACC  271
V  93.1% (270/290)  IGHV5-51*01  182  .C......................C..............A....A...G......................AG....AA......G...A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      P  A  I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6807   272  CCGCCATATATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  93.1% (270/290)  IGHV5-51*01  272  .......G............-------------------------------------------------------------------  291
                                      T  A  M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    -------------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_31283

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            335     4e-94
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTAGTGACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTAGTGACACCTGGTACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	230	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  V  G  S  I  T  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_6808   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGTTGGCTCCATCACCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  93.5% (230/246)  IGHV4-4*01   49   ............................G...........G....................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  S  N 
                    Query_6808   91   GAGTGGATTGGGGAAATCTATCATGGTGGAGCCACCAACTACAACCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAC  180
V  93.5% (230/246)  IGHV4-4*01   139  ........................A....GAG......................A..................................G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  S  L  R  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_6808   181  AACCAGTTCTCCCTGAGTCTGAGGTCTCTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATCTAGTGACACCTGGTACTCGG  270
V  93.5% (230/246)  IGHV4-4*01   229  ................AG.....C...G...........................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  E  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6808   271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.3% (41/43)    IGHJ4*02     6    ---.....C.A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_212051

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            310     1e-86
IGHD2-21*01                                                                                           14.1    8.7  
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-21*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CAAGAATTACAAGTT	TGGTGATGAT	CGTCACTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGGGACAAGAATTACAAGTTTGGTGATGATCGTCACTATGATGCATTTGATTTG	TRDKNYKFGDDRHYDAFDL	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  T  Y  W  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_6809   1    GGTCCCTGAGACTCTCCTGTGCTGCCTCAGGTTTCACCTTTGGCACCTATTGGATGACGTGGATCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  89.6% (224/250)  IGHV3-7*01   47   ......................A.....T..A.........A.T.G...........GC...G......................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  G  D  G  S  K  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6809   91   AGTGGGTGGCCAATATAAAAGGAGATGGAAGTAAGACATACTATGTGGATTCTGTGAAGGGCCGCTTCACCATCTCCAGAGACAATGCCA  180
V  89.6% (224/250)  IGHV3-7*01   137  .............C.....GCA..........G...A............C..............A....................C....  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  F  Y  Y  C  T  R  D  K  N  Y  K  F  G  
                    Query_6809   181  GGAACTCACTGTATCTGCAAATGAACAGCCTCAGAGTCGAGGACACGGCTTTTTATTACTGTACGAGGGACAAGAATTACAAGTTTGGTG  270
V  89.6% (224/250)  IGHV3-7*01   227  A..............................G....C.............G.G.........G....A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD2-21*01  10   -------------------------------------------------------------------------------------.....  14

                                      -IMGT----------------------->                                  
                                      D  D  R  H  Y  D  A  F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6809   271  ATGATCGTCACTATGATGCATTTGATTTGTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  333
D  90.0% (9/10)     IGHD2-21*01  15   G....----------------------------------------------------------  19
J  94.0% (47/50)    IGHJ3*01     1    -------------......T......G.C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_275113

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           335     4e-94
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
Total	N/A	N/A	242	228	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  G  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6810   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACGTTGAGTGGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.2% (228/242)  IGHV3-33*03  47   .....................................C..C...A.C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_6810   91   AGTGGGTGGCAGTTATATGGTATGATGGAATTAATAAATACTATGCTGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCA  180
V  94.2% (228/242)  IGHV3-33*03  137  ..............................G...............A....................................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_6810   181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCG  270
V  94.2% (228/242)  IGHV3-33*03  227  .......G....A......A..............................G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  90.9% (10/11)    IGHD6-13*01  7    -------------------------------------------------------------------....G......------------  17
J  100.0% (46/46)   IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6810   271  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (46/46)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_212053

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           329     3e-92
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAC	TATTACTATGATGGTAGTGGT	GGAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGACATGACTATTACTATGATGGTAGTGGTGGAAATGACTAC	TRHDYYYDGSGGNDY	249	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	105	9	0	92.1
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	233	23	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  S  V  M  H  W  V  R  Q  A  P  K  K  G  L  
                    Query_6811   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCAGTTTTAGTGACTCTGTTATGCACTGGGTCCGCCAGGCTCCCAAGAAAGGGCTGG  90
V  91.0% (233/256)  IGHV3-73*01  47   .........A..........................CC..C....G.....C......................T..GG...........  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  S  R  A  D  N  Y  T  T  A  Y  G  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_6811   91   AGTGGGTTGGCCGTATTAGAAGCAGAGCTGACAATTACACGACGGCATATGGTGCGTCGGTGAAAGGCAGATTCACTATCTCCAGAGATG  180
V  91.0% (233/256)  IGHV3-73*01  137  ........................A....A...G....G....A.......C..................G.....C.............  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------------CDR3
                                      D  S  K  N  T  A  F  L  E  M  N  S  L  K  V  E  D  T  A  V  Y  Y  C  T  R  H  D  Y  Y  Y  
                    Query_6811   181  ATTCAAAGAACACGGCGTTTCTGGAAATGAACAGCCTGAAAGTCGAGGACACGGCCGTGTATTATTGCACTAGACATGACTATTACTATG  270
V  91.0% (233/256)  IGHV3-73*01  227  ..................A....C.................AC.....................C..T........--------------  302
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  95.2% (20/21)    IGHD3-22*01  2    --------------------------------------------------------------------------------..........  11

                                      -IMGT----------------->                                  
                                      D  G  S  G  G  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6811   271  ATGGTAGTGGTGGAAATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.2% (20/21)    IGHD3-22*01  12   ..A........----------------------------------------------  22
J  100.0% (41/41)   IGHJ4*02     8    ----------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_212052

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           369     2e-104
IGHD2-8*01                                                                                            19.9    0.17  
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCATT	TTGAACTAATGCTGTTTGC	CCGAGAG	TACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCATTTTGAACTAATGCTGTTTGCCCGAGAGTACCACTCCTCCGGTATGGACGTC	ARDHFELMLFAREYHSSGMDV	249	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	113	1	0	99.1
CDR3-IMGT (germline)	249	256	8	6	2	0	75
Total	N/A	N/A	256	246	10	0	96.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  G  S  G  F  T  F  R  D  Y  T  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6812   1    GGTCCCTGAGACTCTCCTGTACAGGTTCTGGATTCACCTTTCGTGATTATACTATGACCTGGGTCCGCCAGGCTCCTGGGAAGGGGCTGG  90
V  96.1% (246/256)  IGHV3-49*04  47   ........................C................G........G......G..................A.............  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  A  F  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  M  S  R  D  
                    Query_6812   91   AGTGGGTAGGTTTCATTAGAAGCAAAGCTTTTGGTGGCACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATGTCAAGAGATG  180
V  96.1% (246/256)  IGHV3-49*04  137  ..............................A......G.........................................C..........  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  D  H  F  E  L  
                    Query_6812   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTGCGAGAGATCATTTTGAACTAA  270
V  96.1% (246/256)  IGHV3-49*04  227  ....................................................................A.T.....--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  84.2% (16/19)    IGHD2-8*01   7    ---------------------------------------------------------------------------------...T.....  15

                                      -----CDR3-IMGT-------------------------->                                 
                                      M  L  F  A  R  E  Y  H  S  S  G  M  D  V  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_6812   271  TGCTGTTTGCCCGAGAGTACCACTCCTCCGGTATGGACGTCTGGGGCCAGGGGACCGCGGTCACCGTCTCCTCA  344
D  84.2% (16/19)    IGHD2-8*01   16   ..G...A...----------------------------------------------------------------  25
J  91.2% (52/57)    IGHJ6*02     6    -----------------...T...A..A.....................A......A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_212055

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           358     4e-101
IGHD2-15*01                                                                                           12.2    34    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCAACC	GGTAGC	GCTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAACCGGTAGCGCTAACTAC	STGSANY	289	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	70	4	0	94.6
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	19	5	0	79.2
FR3-IMGT	175	288	114	101	13	0	88.6
Total	N/A	N/A	287	258	29	0	89.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  A  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  N  F  A  
                    Query_6813   2    AGGTTCAGCTGGTGCAGTCTGGAGCAGCGGTGAAAAAGCCCGGGGAGTCTCTGAAGATTTCCTGTAAGGGCTCTGGATACAACTTTGCCA  91
V  89.9% (258/287)  IGHV5-51*01  2    ....G......................A..............................C...........T..........G....A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  L  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  N  L  G  N  Y  D  T  R  Y  
                    Query_6813   92   ATTACTGGCTTGGCTGGGTGCGCCAGATGCCCGGGAAGGGCCTGGAGTGGATGGGGATCATTAATCTTGGTAACTATGATACCAGATACA  181
V  89.9% (258/287)  IGHV5-51*01  92   GC......A.C..........................A.......................CT...C....G...C..............  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  A  P  F  Q  D  L  V  T  I  S  A  D  K  S  I  D  T  V  Y  L  Q  W  A  S  L  K  A  S  D  
                    Query_6813   182  GAGCGCCCTTCCAAGACCTGGTCACCATCTCAGCCGACAAATCCATCGACACCGTCTACCTCCAGTGGGCCAGCCTGAAGGCCTCGGACA  271
V  89.9% (258/287)  IGHV5-51*01  182  .CC..T.........G..A.....................G......AG.....C......G......AG....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----CDR3-IMGT----->                                  
                                      T  A  I  Y  Y  C  S  T  G  S  A  N  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6813   272  CCGCCATATATTACTGTTCAACCGGTAGCGCTAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  343
V  89.9% (258/287)  IGHV5-51*01  272  .......G.........-------------------------------------------------------  288
                                      T  A  M  Y  Y  C                                                        
D  100.0% (6/6)     IGHD2-15*01  17   -----------------------......-------------------------------------------  22
J  100.0% (39/39)   IGHJ4*02     10   ---------------------------------.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_212056

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            341     5e-96
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCCACCCGAAAA	TATGACAGTAGTGATTATT	CCTCCCACCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCACCCGAAAATATGACAGTAGTGATTATTCCTCCCACCTCTTTGACTAC	STRKYDSSDYSSHLFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	108	6	0	94.7
Total	N/A	N/A	240	229	11	0	95.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  T  N  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_6814   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTACTAACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.4% (229/240)  IGHV4-4*02   49   ..............................................G...........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  R  G  G  S  P  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  K 
                    Query_6814   91   GAGTGGATTGGGGAAATCTATCGTGGTGGGAGCCCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCACTAGACAAGTCCAAA  180
V  95.4% (229/240)  IGHV4-4*02   139  ......................A.A........A.....................................A...G.............G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  S  T  R  K  Y  D  S  S  D  Y 
                    Query_6814   181  AACCAGTTCTCCCTGCGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTTCCACCCGAAAATATGACAGTAGTGATTAT  270
V  95.4% (229/240)  IGHV4-4*02   229  ...............AA.....G.....................................------------------------------  288
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  89.5% (17/19)    IGHD3-22*01  8    ------------------------------------------------------------------------.....T.......G....  25

                                      -------------------->                                  
                                       S  S  H  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6814   271  TCCTCCCACCTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  89.5% (17/19)    IGHD3-22*01  26   .------------------------------------------------------  26
J  100.0% (44/44)   IGHJ4*02     5    -----------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_55055

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           296     2e-82
IGHD1-1*01                                                                                            18.0    0.58 
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGACTAG	TGGAACGAC	TCTTGTGT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGACTAGTGGAACGACTCTTGTGTACTGGTTCGACCCC	ARTSGTTLVYWFDP	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	242	3	3	0	0	100
Total	N/A	N/A	239	214	25	0	89.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  S  G  G  S  I  N  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  Q  L  E  
                    Query_6815   4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATCAATACCTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAACAACTGGAGT  93
V  89.5% (214/239)  IGHV4-59*08  50   .....TCC...A....CA.....................G..GT...................................GGG........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  S  Y  S  G  S  T  T  Y  S  P  S  L  K  S  R  V  T  M  S  I  D  T  S  K  N  
                    Query_6815   94   GGATTGGTTATATCTCTTACAGTGGGAGCACCACTTATAGCCCCTCCCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCCAAGAACC  183
V  89.5% (214/239)  IGHV4-59*08  140  .......G.......A.................AC..C.A...........................A...G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  T  S  G  T  T  L  V  Y  W  
                    Query_6815   184  AGTTCTCCCTGAGGCTGACGTCTGTGACCGCCGCAGACACGGCCATTTATTACTGTGCGCGGACTAGTGGAACGACTCTTGTGTACTGGT  273
V  89.5% (214/239)  IGHV4-59*08  230  ............A.....GC........................G.G............-------------------------------  288
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (9/9)     IGHD1-1*01   9    -------------------------------------------------------------------.........--------------  17
J  95.8% (46/48)    IGHJ5*02     4    ------------------------------------------------------------------------------------......  9

                                      ------->                                  
                                      F  D  P  W  G  Q  G  I  L  V  A  V  S  S  
                    Query_6815   274  TCGACCCCTGGGGCCAGGGAATCCTGGTCGCCGTCTCCTCAG  315
J  95.8% (46/48)    IGHJ5*02     10   .....................C.......A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_212058

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-9*01                                                                                            18.0    0.59 
IGHJ3*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-9*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAGAAGGGA	GACTGGTTA	ATAGGAA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGAGATAAGAAGGGAGACTGGTTAATAGGAAATGCTTTTGATATC	SRDKKGDWLIGNAFDI	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  V  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6816   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTAGTTATGTTATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   .....................................C........C...AGC.....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  T  S  S  S  Y  I  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  H  N  A  
                    Query_6816   91   AGTGGGTCTCATCTATTAGTACCAGTAGTAGTTACATACACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGACACAACGCCA  180
V  93.2% (233/250)  IGHV3-21*01  137  .............C.......GT...............T.........................................G.........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  I  Y  Y  C  S  R  D  K  K  G  D  W  L  
                    Query_6816   181  AGAACTCACTGTATCTGGAAATGAACAGCCTGAGAGTCGAGGACACGGCTATATATTATTGTTCGAGAGATAAGAAGGGAGACTGGTTAA  270
V  93.2% (233/250)  IGHV3-21*01  227  .................C..................C.............G.G.....C...G.......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD3-9*01   16   --------------------------------------------------------------------------------.........-  24

                                      T------------------>                                  
                                      I  G  N  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6816   271  TAGGAAATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
J  100.0% (48/48)   IGHJ3*02     3    ------................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_95026

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           311     4e-87
IGHD3-10*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGG	CCGAAGGTACCT	TGGGTCGGGGAG	ATTTATACCGTTTTCG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCGAAGGTACCTTGGGTCGGGGAGATTTATACCGTTTTCGGACTAT	ARGRRYLGSGRFIPFSDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  E  V  Y  G  G  S  F  N  N  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6817   1    ACCCTGTCCCTCACCTGCGAAGTCTATGGTGGGTCCTTCAATAATTACTTCTGGAACTGGATCCGCCAGCCCCCAGGAAAGGGTCTGGAG  90
V  90.6% (222/245)  IGHV4-34*01  49   ...................CT...................G.GG.....A.....G.....................G.....G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  V  S  H  S  G  N  T  N  Y  N  L  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_6817   91   TGGATTGGGGAAGTCAGTCATAGTGGCAACACCAACTACAACCTGTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-34*01  139  ............A...A.........A.G..............C............................G.................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  Y  S  L  N  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  Y  L  G  S  G  R 
                    Query_6817   181  CAGTACTCCCTGAACCTGGCTTCTGTGACCGCCGCGGACACGGCTGTCTACTACTGTGCGAGGGGCCGAAGGTACCTTGGGTCGGGGAGA  270
V  90.6% (222/245)  IGHV4-34*01  229  ....T.........G...AGC..........................G..T...........A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  91.7% (11/12)    IGHD3-10*01  10   -----------------------------------------------------------------------------...T........-  21

                                      -------------------->                                  
                                       F  I  P  F  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6817   271  TTTATACCGTTTTCGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.5% (39/40)    IGHJ4*02     9    ---------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_221470

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           293     2e-81
IGHD3-3*01                                                                                            18.0    0.59 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD3-3*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTCAA	GGAGTTCC	AGTAGTTATTAT	GTCGGGTTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGGAGTTCCAGTAGTTATTATGTCGGGTTGGACTACTTTGAAAAC	SRSSSSYYVGLDYFEN	239	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	28	27	1	0	96.4
CDR1-IMGT	29	52	24	19	5	0	79.2
FR2-IMGT	53	103	51	46	5	0	90.2
CDR2-IMGT	104	124	24	18	3	3	75
FR3-IMGT	125	238	114	105	9	0	92.1
CDR3-IMGT (germline)	239	242	4	3	1	0	75
Total	N/A	N/A	245	218	24	3	89


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  S  F  H  *  V  R  Q  A  P  G  K  G  L  E
                    Query_6818   1    GTCCCTGAGACTCTCCTGTGCAGCTTCTGGATTCACGTTCGATGACTATAGTTTCCACTGAGTCCGTCAAGCTCCGGGGAAGGGTCTGGA  90
V  89.0% (218/245)  IGHV3-43*01  48   ........................C...........C..T.....T....CCA.G.....G.............................  137
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  E

                                      ------------><-------CDR2-IMGT------><----------------------------------------------------
                                        W  V  S  F  I  G  W  D  G     T  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  D
                    Query_6818   91   GTGGGTCTCTTTCATTGGTTGGGATGGG---ACCACAGACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCGA  177
V  89.0% (218/245)  IGHV3-43*01  138  ..........C.T...A..........TGGT.G....T..................................................A.  227
                                        W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K

                                      FR3-IMGT----------------------------------------------------><-------------------CDR3-IMGT
                                        N  S  L  F  L  Q  M  T  G  L  R  I  E  D  T  A  L  Y  Y  C  S  R  S  S  S  S  Y  Y  V  G
                    Query_6818   178  CAACTCCCTCTTTCTGCAAATGACTGGTCTGAGAATTGAGGACACCGCCTTGTATTACTGTTCAAGGAGTTCCAGTAGTTATTATGTCGG  267
V  89.0% (218/245)  IGHV3-43*01  228  A........G.A...........ACA.........C.........................G...-------------------------  292
                                        N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A                           
D  91.7% (11/12)    IGHD3-3*01   17   -------------------------------------------------------------------------...G........-----  28

                                      ------------------>                                  
                                        L  D  Y  F  E  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6818   268  GTTGGACTACTTTGAAAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  320
J  95.8% (46/48)    IGHJ4*02     1    -----..........CT....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_323081

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           344     6e-97
IGHD2-15*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGG	GGATATTGTAGTGGTG	CTCCCTGCTCCCCGAGCC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATGGGGGATATTGTAGTGGTGCTCCCTGCTCCCCGAGCCACTTCGACTAC	VKDGGYCSGAPCSPSHFDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  A  F  S  G  S  A  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_6819   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCGCCTTCAGTGGAAGTGCTATGTACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  94.0% (235/250)  IGHV3-64*05  47   ...................................A........A.CTA.......C.................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  V  S  A  V  S  G  D  G  G  G  T  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6819   91   AATGTGTTTCAGCTGTTAGTGGTGATGGGGGTGGCACAAAGTACGCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-64*05  137  ...A..........A.....A..A........A.....T.C.................................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  F  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K  D  G  G  Y  C  S  G  
                    Query_6819   181  AGAACACGCTGTTTCTTCAAATGAGCAGTCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGTGAAAGATGGGGGATATTGTAGTGGTG  270
V  94.0% (235/250)  IGHV3-64*05  227  ............A.G.......................................................--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (16/16)   IGHD2-15*01  2    --------------------------------------------------------------------------................  17

                                      -IMGT----------------------->                                  
                                      A  P  C  S  P  S  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6819   271  CTCCCTGCTCCCCGAGCCACTTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
J  97.8% (44/45)    IGHJ4*02     4    ------------------....T........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_231365

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           276     3e-76
IGHD7-27*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD7-27*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGACAAGGGG	ACTGGGGA	N/A	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAAGGGGACTGGGGATGGTACTTCGATCTC	ARRQGDWGWYFDL	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	60	33	26	4	3	78.8
FR2-IMGT	61	111	51	44	7	0	86.3
CDR2-IMGT	112	129	21	12	6	3	57.1
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	252	218	28	6	86.5


Alignments

                                      <--------FR1-IMGT---------><-----------CDR1-IMGT-----------><--------------------FR2-IMGT-
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  S  A  G  H  Y  W  S  W  I  R  Q  T  P  G  K 
                    Query_6820   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGCAGTGCTGGTCACTATTGGAGTTGGATCCGCCAGACCCCCGGAAAG  90
V  86.5% (218/252)  IGHV4-31*03  49   ...............................G............---..G....T....C.....C............CA...A..G...  135
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S     G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K 

                                      --------------------><-----CDR2-IMGT-----><-----------------------------------------------
                                       G  L  E  W  M  G  Y  I  F  Y  T  V     P  Y  Y  N  P  S  L  K  S  R  L  T  M  S  G  D  T 
                    Query_6820   91   GGCCTGGAGTGGATGGGTTACATCTTTTATACTGTGC---CATACTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCAGGAGACACC  177
V  86.5% (218/252)  IGHV4-31*03  136  ..............T..G.......A...C.G..G.AGCA.C..............C............G.T.....A....T......G  225
                                       G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T 

                                      -----FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT
                                       A  K  N  Q  F  S  L  R  L  T  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  R  Q  G  D  W  G 
                    Query_6820   178  GCTAAGAACCAGTTTTCCCTGAGGCTGACCTCTGTGACTTCCGCGGACACGGCCGTGTATTACTGTGCGAGACGACAAGGGGACTGGGGA  267
V  86.5% (218/252)  IGHV4-31*03  226  T.............C.......A.....G..........G................................------------------  297
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                   
D  100.0% (8/8)     IGHD7-27*01  4    ----------------------------------------------------------------------------------........  11

                                      -------------->                                  
                                       W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6820   268  TGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  316
J  100.0% (49/49)   IGHJ2*01     5    .................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_244381

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_6821   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_6821   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_6821   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_6821   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_229668

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           353     9e-100
IGHD1-7*01                                                                                            12.2    31    
IGHJ1*01                                                                                              60.3    2e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-7*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	T	GAACTA	AACAGTCTTCCC	CACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGATGAACTAAACAGTCTTCCCCAC	ATDELNSLPH	249	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	241	15	0	94.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6822   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACTTTCAGTGACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.1% (241/256)  IGHV3-15*01  47   .......T.......................A............A.............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  T  S  K  S  D  G  G  T  T  D  F  A  V  P  V  E  G  R  F  T  I  S  R  D  
                    Query_6822   91   AGTGGGTTGGCCGTATTACTAGCAAAAGTGATGGGGGGACAACAGACTTCGCTGTACCCGTGGAGGGCAGATTCACCATCTCAAGAGATG  180
V  94.1% (241/256)  IGHV3-15*01  137  ..................AA.......C......T.............A.....C.......A.A.........................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  A  T  D  E  L  N  S  
                    Query_6822   181  ATTCAAAGAACACGCTGTATCTGCAAATGAACAGCCTGAAAAGCGAGGACACAGCCGTGTATTATTGTGCCACAGATGAACTAAACAGTC  270
V  94.1% (241/256)  IGHV3-15*01  227  .......A..................................C.....................C...A.......--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (6/6)     IGHD1-7*01   11   -----------------------------------------------------------------------------......-------  16

                                      ------->                                  
                                      L  P  H  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_6822   271  TTCCCCACTGGGGCCAGGGGACCCTGGTCGCCGTCTCCTCAG  312
J  94.6% (35/37)    IGHJ1*01     16   -----..............C.........A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_88839

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            420     7e-120
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	274	5	0	98.2


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_6823  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  98.2% (274/279)  IGHV6-1*01  26   ...........................................................G......G....AG.................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_6823  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.2% (274/279)  IGHV6-1*01  116  ..........................................................................................  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_6823  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.2% (274/279)  IGHV6-1*01  206  ..............A...........................................................................  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------CDR3-IMGT--------->                                  
                                     C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6823  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  98.2% (274/279)  IGHV6-1*01  296  .........---------------------------------------------------------  304
                                     C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02    4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_88838

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         318     6e-89
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGTCAA	TACTATGCTATTAGTGCTTATT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGTCAATACTATGCTATTAGTGCTTATTACTACTTTGACCAC	ARGQYYAISAYYYFDH	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  D  V  S  G  G  S  I  S  S  G  G  Y  Y  W  N  W  I  R  Q  T  P  G  K  G  
                    Query_6824     4    CCCTGAGACTCTCCTGCGATGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAATTGGATTCGACAGACCCCAGGGAAGGGCC  93
V  91.1% (225/247)  IGHV4-30-4*01  50   .....TCC...A.....AC.............................A...........G......C..C...C...............  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  S  V  Y  Y  S  G  R  T  Y  D  S  P  S  L  K  S  R  V  T  L  S  V  D  T  S  
                    Query_6824     94   TGGAGTGGATTGGGTCCGTCTATTACAGTGGGCGCACCTATGACAGCCCGTCCCTCAAGAGTCGAGTTACCTTATCAGTCGACACGTCCA  183
V  91.1% (225/247)  IGHV4-30-4*01  140  ...............A.A..............A.......CT...A.........................A.......A..........  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                        K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  Q  Y  Y  A  I  S  
                    Query_6824     184  AGAACCAGTTCTCCCTGAGGTTGAGCTCTGTGACTGCCGCAGACACGGCCGTCTATTACTGTGCCAGGGGTCAATACTATGCTATTAGTG  273
V  91.1% (225/247)  IGHV4-30-4*01  230  ..................A.C...............................G..............-----------------------  296
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  86.4% (19/22)    IGHD3-22*01    5    --------------------------------------------------------------------------.......A..G.....  20

                                        T------------------>                                  
                                        A  Y  Y  Y  F  D  H  W  G  R  G  I  L  V  T  V  T  S  
                    Query_6824     274  CTTATTACTACTTTGACCACTGGGGCCGGGGAATCCTGGTCACCGTCACGTCAG  327
D  86.4% (19/22)    IGHD3-22*01    21   G.....------------------------------------------------  26
J  89.6% (43/48)    IGHJ4*02       1    ------...........T.........A.....C.............T.C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_129227

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            350     8e-99
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGGTTTTGGG	TGATAGTAGTGGTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCCGGTTTTGGGTGATAGTAGTGGTTATTACTTTGTCTCC	VRDPVLGDSSGYYFVS	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  D  Y  G  F  M  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6825   1    GGTCCCTGAGACTCTCCTGTGCAGACTATGGATTCATGTTTAGTAGCTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-7*01   47   ........................C..C........CC....................C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6825   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAAAATTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (237/250)  IGHV3-7*01   137  ......................................T.C.................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  V  R  D  P  V  L  G  D  S  
                    Query_6825   181  AGAACACTCTATATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTATATTACTGTGTGAGAGATCCGGTTTTGGGTGATAGTA  270
V  94.8% (237/250)  IGHV3-7*01   227  .....T.A..G.........................C...............G..........C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (16/16)   IGHD3-22*01  10   ----------------------------------------------------------------------------------........  17

                                      T------------------>                                  
                                      S  G  Y  Y  F  V  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6825   271  GTGGTTATTACTTTGTCTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (16/16)   IGHD3-22*01  18   ........----------------------------------------------  25
J  95.7% (44/46)    IGHJ4*02     3    --------.......A..A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_169071

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           346     2e-97
IGHD3-3*01                                                                                            14.1    8.5  
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	CTG	TTTTTGG	CGCAGCGAATGATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCTGTTTTTGGCGCAGCGAATGATAACTACGGTATGGACGTC	ARAVFGAANDNYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6826   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGGTATTGGATACACTGGGTCCGTCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-74*01  47   ..............................................C..C.....G...........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  H  I  N  S  D  G  S  T  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6826   91   TTTGGGTCTCACATATTAACAGTGATGGGAGTACCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-74*01  137  .G..........G......T.............G.....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  V  F  G  A  A  N  
                    Query_6826   181  AGAATACCCTGTATCTACAATTGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGAGCTGTTTTTGGCGCAGCGAATG  270
V  94.4% (235/249)  IGHV3-74*01  227  ....C..G........G...A...............................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-3*01   10   ------------------------------------------------------------------------.......-----------  16

                                      T------------------>                                 
                                      D  N  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6826   271  ATAACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  100.0% (50/50)   IGHJ6*02     13   ---..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_88832

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCAC	GTATCACTATGACAATGGTGGTTATT	GGACCGCGGGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCACGTATCACTATGACAATGGTGGTTATTGGACCGCGGGGGCTTTTGATATC	ARTTYHYDNGGYWTAGAFDI	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6827   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCTTGAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (232/243)  IGHV4-59*01  49   ....................................A.C...................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  F  G  F  I  Y  Y  S  G  S  T  T  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_6827   91   TGGTTTGGTTTTATCTATTACAGTGGGAGCACCACCTACAACCCTTCCCTCAGGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAAG  180
V  95.5% (232/243)  IGHV4-59*01  139  ...A....G.A.......................A.........C.......A.....................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  T  Y  H  Y  D  N  G  G 
                    Query_6827   181  CAGTTCTCCCTGAAGCTGAGATCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAACCACGTATCACTATGACAATGGTGGT  270
V  95.5% (232/243)  IGHV4-59*01  229  ....................C..........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (22/26)    IGHD3-22*01  1    --------------------------------------------------------------------....T.......T.G.A.....  22

                                      GT------------------------>                                  
                                       Y  W  T  A  G  A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_6827   271  TATTGGACCGCGGGGGCTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  331
D  84.6% (22/26)    IGHD3-22*01  23   ....---------------------------------------------------------  26
J  97.8% (45/46)    IGHJ3*02     5    ---------------...........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_88831

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         299     3e-83
IGHD5-12*01                                                                                           21.8    0.042
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GAAGGTTAAGAC	GTGGATATAGCGGC	CAGCCTCCTGGAA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAAGGTTAAGACGTGGATATAGCGGCCAGCCTCCTGGAAGGTTCGACCCC	ARGRLRRGYSGQPPGRFDP	246	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	102	12	0	89.5
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	220	29	0	88.4


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  V  V  S  G  G  S  I  T  S  G  D  Y  S  W  S  W  I  R  L  P  P  G  K  G  
                    Query_6828     4    CCCTGAGACTCTCCTGCGTTGTCTCTGGTGGCTCCATCACCAGCGGTGATTACTCCTGGAGCTGGATCCGGCTGCCTCCAGGGAAGGGCC  93
V  88.4% (220/249)  IGHV4-30-2*01  50   .....TCC...A......C....................G...T....G.......................A...A.............  139
                                           L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  T  G  S  I  F  D  N  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  
                    Query_6828     94   TAGAGTGGACTGGGTCCATCTTTGATAATGGGCGCACCTACTACAATCCGTCCCTCAAGAGTCGAGTCACCATATCGCTGGACAAGTCCA  183
V  88.4% (220/249)  IGHV4-30-2*01  140  .G.......T.....A.....A.C...G....A.............C.............................AG.A....G.....  229
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                        R  N  H  F  S  L  E  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  L  R  R  G  Y  
                    Query_6828     184  GGAACCACTTTTCCCTGGAACTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGCCAGAGGAAGGTTAAGACGTGGATATA  273
V  88.4% (220/249)  IGHV4-30-2*01  230  A......G..C......A.G.....C................................C..........---------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  92.9% (13/14)    IGHD5-12*01    1    ---------------------------------------------------------------------------------.........  9

                                        -IMGT----------------------->                                 
                                        S  G  Q  P  P  G  R  F  D  P  W  G  Q  G  T  L  V  I  V  S  S 
                    Query_6828     274  GCGGCCAGCCTCCTGGAAGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCA  335
D  92.9% (13/14)    IGHD5-12*01    10   .T...---------------------------------------------------------  14
J  97.7% (43/44)    IGHJ5*02       7    ------------------.................................C..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_88830

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_6829   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_6829   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_6829   181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_6829   271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_88836

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           305     3e-85
IGHD3-22*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	AATTCC	GATGGTAGTGGCTAT	CCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAAATTCCGATGGTAGTGGCTATCCCCTTGACTAC	ARNSDGSGYPLDY	230	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	105	9	0	92.1
CDR3-IMGT (germline)	230	235	6	5	1	0	83.3
Total	N/A	N/A	223	209	14	0	93.7


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  A  W  V  A  V  I  W  N  D
                    Query_6830   13   GTCTGGATTTACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGCGTGGGTGGCAGTTATATGGAATGA  102
V  93.7% (209/223)  IGHV3-33*01  72   .........C..........G............................................A...................T....  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  I  L  Y  L  Q  M  N
                    Query_6830   103  TGGAAGTAATAAATACTATGCAGAGTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACATTCTGTATCTGCAAATGAA  192
V  93.7% (209/223)  IGHV3-33*01  162  ........................C..............................................CG.................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------CDR3-IMGT-------------->              
                                        R  L  G  A  E  D  T  A  I  Y  Y  C  A  R  N  S  D  G  S  G  Y  P  L  D  Y  W  G  Q  G  I
                    Query_6830   193  TCGACTGGGAGCCGAGGACACGGCTATTTATTACTGTGCGCGAAATTCCGATGGTAGTGGCTATCCCCTTGACTACTGGGGCCAGGGAAT  282
V  93.7% (209/223)  IGHV3-33*01  252  CA.C...A.................G.G............A..-----------------------------------------------  294
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  86.7% (13/15)    IGHD3-22*01  11   -------------------------------------------------...A.......T...--------------------------  25
J  97.6% (41/42)    IGHJ4*02     7    --------------------------------------------------------------------.....................C  28

                                                          
                                        L  V  T  V  S  S  
                    Query_6830   283  CCTGGTCACCGTCTCCTCAG  302
J  97.6% (41/42)    IGHJ4*02     29   ....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_88835

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           343     2e-96
IGHD3-22*01                                                                                           25.7    0.003
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAG	GCG	ATTATTATGATAGCAGTGATTA	C	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGGCGATTATTATGATAGCAGTGATTACGATGCTTTTGATATC	TRGDYYDSSDYDAFDI	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	104	10	0	91.2
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	237	18	0	92.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6831   1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.9% (237/255)  IGHV3-49*04  47   .........................................................G................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  A  F  I  S  S  K  A  Y  G  D  K  T  Q  H  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_6831   91   AATGGGTAGCTTTCATTAGCAGCAAGGCTTATGGTGACAAAACACAACACGCCGCGTCTGTGAAGGGCCGATTCACCATCTCAAGAGATG  180
V  92.9% (237/255)  IGHV3-49*04  137  .G.......G.........A.....A..........GG.C....G..T................A...A.....................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  K  S  I  A  Y  L  E  M  K  S  L  R  T  E  D  T  A  I  Y  Y  C  T  R  G  D  Y  Y  D  
                    Query_6831   181  ATTCCAAAAGCATCGCCTATCTGGAAATGAAAAGCCTGAGAACCGAGGACACAGCCATATATTATTGTACTAGAGGCGATTATTATGATA  270
V  92.9% (237/255)  IGHV3-49*04  227  .......................C.......C.......A................G.G.....C..........---------------  301
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  86.4% (19/22)    IGHD3-22*01  3    ------------------------------------------------------------------------------....C.......  14

                                      R3-IMGT------------------>                                  
                                      S  S  D  Y  D  A  F  D  I  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_6831   271  GCAGTGATTACGATGCTTTTGATATCTGGGGCCAAGGGACAAGGGTCACCGTCTCTTCAG  330
D  86.4% (19/22)    IGHD3-22*01  15   .T....G...--------------------------------------------------  24
J  98.0% (48/49)    IGHJ3*02     2    -----------...............................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_88834

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           361     4e-102
IGHD4-17*01                                                                                           18.0    0.61  
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCA	ACGGTGACT	CGGAGGGATTTGGCTG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAACGGTGACTCGGAGGGATTTGGCTGCTACTACGGTATGGACGTC	ARGNGDSEGFGCYYGMDV	246	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	112	2	0	98.2
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  D  S  I  N  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_6832   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCAACAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  96.4% (240/249)  IGHV4-31*01  50   .....TCC...A..................G........G..........T.......................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  
                    Query_6832   94   TGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACGTCTA  183
V  96.4% (240/249)  IGHV4-31*01  140  ..........................................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  N  G  D  S  E  G  
                    Query_6832   184  AGAACCAGTTCTCCCTGAAGGTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCAACGGTGACTCGGAGGGAT  273
V  96.4% (240/249)  IGHV4-31*01  230  ....................C...G............................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD4-17*01  6    ------------------------------------------------------------------------.........---------  14

                                      IMGT--------------------->                                 
                                      F  G  C  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6832   274  TTGGCTGCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  100.0% (52/52)   IGHJ6*02     11   -------....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_156991

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     1e-124
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_6833   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  98.3% (284/289)  IGHV5-51*01  6    .............................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_6833   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6833   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6833   271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_6833   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_156990

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            397     8e-113
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGAC	TGGTTCGGGGACTTA	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACTGGTTCGGGGACTTACCCCTTTGATTAC	ARVTGSGTYPFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  G  S  Y
                    Query_6834   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCGGCAGCTA  90
V  93.8% (272/290)  IGHV1-8*02   6    ..................G...............................................................AC......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  D  Y  A  Q
                    Query_6834   91   TGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATGAATCCTAACAGTGGGAACACAGACTATGCACA  180
V  93.8% (272/290)  IGHV1-8*02   96   .........................A..................................C...........T.......G.........  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  Y  M  E  L  S  S  L  G  S  A  D  T  A
                    Query_6834   181  GAAGTTCCGGGGCAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCTACATGGAGCTGAGTAGTCTGGGATCTGCCGACACGGC  270
V  93.8% (272/290)  IGHV1-8*02   186  ........A.......................A...C..C.T........................C..C...A......AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  V  T  G  S  G  T  Y  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6834   271  CGTCTATTACTGTGCGAGAGTGACTGGTTCGGGGACTTACCCCTTTGATTACTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  356
V  93.8% (272/290)  IGHV1-8*02   276  ...G................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  93.3% (14/15)    IGHD3-10*01  10   ------------------------...........G...-----------------------------------------------  24
J  95.5% (42/44)    IGHJ4*02     5    ------------------------------------------......C....................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_156993

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           374     8e-106
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	ARPSSASGWHFDN	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	264	25	0	91.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_6835   1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCAGTTA  90
V  91.3% (264/289)  IGHV5-51*03  6    .........................G.............G.........................G.........C.GC..T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  R  M  G  I  I  L  P  H  D  S  D  I  R  Y  S  P
                    Query_6835   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGCGGATGGGGATCATCTTACCTCATGACTCTGATATTAGATATAGTCC  180
V  91.3% (264/289)  IGHV5-51*03  96   C.......G..................................T...............AT...GG...........CC.....C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  G
                    Query_6835   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGG  270
V  91.3% (264/289)  IGHV5-51*03  186  .............................C..A.AA........G............................................C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6835   271  CATGTATTACTGTGCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  91.3% (264/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_156992

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           263     1e-72
IGHD2-15*01                                                                                           12.2    32   
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TGGTGG	CGGACGGGGGCTCGATTGGGGTGCGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTGGCGGACGGGGGCTCGATTGGGGTGCGGTGGTTCGACACC	ARLVADGGSIGVRWFDT	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	96	18	0	84.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	206	38	0	84.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  I  R  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  T  L  E 
                    Query_6836   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGCCTCCATTAGAAGTTATTACTGGAGTTGGGTTCGCCAGCCCCCCGGCAAGACACTGGAG  90
V  84.4% (206/244)  IGHV4-59*08  49   ...................C...........G......C..T.....C........C...A.C..G........A..G...GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  F  H  T  G  T  T  N  Y  H  P  S  L  K  S  R  V  T  I  S  S  D  T  S  K  N 
                    Query_6836   91   TGGATTGGCTATTTCTTTCACACCGGGACCACCAATTACCATCCCTCCCTCAAGAGTCGAGTCACCATTTCATCAGACACGTCCAAGAAC  180
V  84.4% (206/244)  IGHV4-59*08  139  ........G...A...A.T...GT....G......C...A.C..........................A...GT................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       I  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  V  A  D  G  G  S  I  G 
                    Query_6836   181  ATCTTCTCATTGACTCTGACGTCTGTGACCGCCGCAGACACGGCCGTCTATTTTTGTGCGAGACTGGTGGCGGACGGGGGCTCGATTGGG  270
V  84.4% (206/244)  IGHV4-59*08  229  CAG.....CC...AG....GC..........................G....AC..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-15*01  13   ----------------------------------------------------------------......--------------------  18

                                      ----------------->                                  
                                       V  R  W  F  D  T  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_6836   271  GTGCGGTGGTTCGACACCTGGGGCCAGGGAACGCTGGTCAGCGTCTCATCAG  322
J  91.3% (42/46)    IGHJ5*02     6    ------.........C................C.......C......C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_156994

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD3-16*01                                                                                           12.2    33   
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GCCGCGAAAATCGGTC	TTTGGG	CTTCTTATCCCTGGGGGGGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCCGCGAAAATCGGTCTTTGGGCTTCTTATCCCTGGGGGGGGCGACTGGTTCGACCCC	ARGPRKSVFGLLIPGGGDWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  D  Y  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6837   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCGATTACTATTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  94.7% (232/245)  IGHV4-34*01  49   .......................................AG.GGT..C..........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  G  A  T  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6837   91   TGGATTGGGGAAATCAATCATGGTGCAACGACCAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-34*01  139  .....................A...G..GC............C...............................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       L  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  K  S  V  F  G  L 
                    Query_6837   181  CTGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGCCGCGAAAATCGGTCTTTGGGCTT  270
V  94.7% (232/245)  IGHV4-34*01  229  .A..................C............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD3-16*01  15   ---------------------------------------------------------------------------------......---  20

                                      -IMGT--------------------------->                                  
                                       L  I  P  G  G  G  D  W  F  D  P  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_6837   271  CTTATCCCTGGGGGGGGCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  337
J  97.9% (47/48)    IGHJ5*02     4    -------------------................................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_156997

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           260     1e-71
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	93	21	0	81.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	205	39	0	84


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_6838   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  84.0% (205/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_6838   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  84.0% (205/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_6838   181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCACGTAT  270
V  84.0% (205/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_6838   271  GTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    ---------------------------------...G....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_156996

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            308     4e-86
IGHD3-3*01                                                                                            14.1    8.0  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	221	24	0	90.2


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  T  T  N  Q  W  W  T  W  V  R  Q  P  P  G  G  G  L 
                    Query_6839  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCACTAATCAGTGGTGGACTTGGGTCCGCCAGCCCCCAGGGGGGGGGCTG  90
V  90.2% (221/245)  IGHV4-4*02  49   ........................................G..G..G.A.C.......G......................AA.......  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  F  P  N  G  N  T  N  Y  S  P  S  L  K  S  R  L  T  I  S  M  A  K  S  K 
                    Query_6839  91   GAGTGGATTGGTGAAATTTTTCCTAATGGAAACACCAACTACAGCCCGTCCCTCAAGAGTCGACTCACCATTTCAATGGCTAAGTCCAAG  180
V  90.2% (221/245)  IGHV4-4*02  139  ...........G.....C.A..A..G...G.G...........A...................G.......A...G.A.AC.........  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                      N  Q  V  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  D 
                    Query_6839  181  AACCAGGTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCGAC  270
V  90.2% (221/245)  IGHV4-4*02  229  ......T.........................C................................-------------------------  293
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-3*01  15   ------------------------------------------------------------------.......-----------------  21
J  100.0% (51/51)   IGHJ5*02    1    ----------------------------------------------------------------------------..............  14

                                     -->                                  
                                      P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6839  271  CCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (51/51)   IGHJ5*02    15   .....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_156999

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           325     3e-91
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGGGAA	AACGAC	TGGGATCGTAGGTGGTCCGGT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGGGAAAACGACTGGGATCGTAGGTGGTCCGGTTTTCACTTC	ASRENDWDRRWSGFHF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6840   1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.0% (225/242)  IGHV4-59*08  49   ....................T......................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       L  I  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S  R  N 
                    Query_6840   91   TTGATTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGTCGACTCACCATCTCAGTAGACACGTCGAGGAAC  180
V  93.0% (225/242)  IGHV4-59*08  139  .G......G...A........A........A.....................A.......G.......A..............C.A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  S  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  N  D  W  D  R  R  W 
                    Query_6840   181  CAGTTCTCCCTGAGCGTGAACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCGAGCCGGGAAAACGACTGGGATCGTAGGTGG  270
V  93.0% (225/242)  IGHV4-59*08  229  .............AGC...G.........C................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD1-1*01   12   ---------------------------------------------------------------------......---------------  17

                                      -------------->                                  
                                       S  G  F  H  F  W  G  P  G  T  L  V  T  V  S  S  
                    Query_6840   271  TCCGGTTTTCACTTCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  319
J  93.0% (40/43)    IGHJ4*02     6    ------...G...A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_156998

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           399     3e-113
IGHD3-22*01                                                                                           12.2    37    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACATTTCCTAAT	CTATGA	CAACAGAAATTACCGCCCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACATTTCCTAATCTATGACAACAGAAATTACCGCCCTCTTGACTAC	ARGHFLIYDNRNYRPLDY	290	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	76	69	68	1	0	98.6
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	104	10	0	91.2
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  R  Y 
                    Query_6841   8    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACAGCTTTTCCCGTTAT  97
V  94.1% (272/289)  IGHV1-18*01  7    .................................................................T..........C....A..A.C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  H 
                    Query_6841   98   GGTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCAGCGCTTACAATGGTAACACAAACTATGCACAT  187
V  94.1% (272/289)  IGHV1-18*01  97   ...A..............................................A......................................G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  E  D  R  V  T  M  T  T  D  T  S  T  T  T  A  Y  M  E  L  R  S  L  T  S  D  D  T  A 
                    Query_6841   188  AAATTCGAGGACAGAGTCACCATGACCACAGACACTTCCACGACCACAGCCTACATGGAACTGAGGAGCCTGACATCTGACGACACGGCC  277
V  94.1% (272/289)  IGHV1-18*01  187  ..GC..C...G........................A.......G...............G.............G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  G  H  F  L  I  Y  D  N  R  N  Y  R  P  L  D  Y  W  G  Q  G  T  L  L  T 
                    Query_6841   278  GTCTATTACTGTGCGAGAGGACATTTCCTAATCTATGACAACAGAAATTACCGCCCTCTTGACTACTGGGGCCAGGGAACCCTGCTCACC  367
V  94.1% (272/289)  IGHV1-18*01  277  ..G................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD3-22*01  7    --------------------------------......----------------------------------------------------  12
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------..........................G.....  38

                                                
                                       V  S  S  
                    Query_6841   368  GTCTCCTCAG  377
J  97.6% (41/42)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_67579

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           293     2e-81
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ3*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GAATTACACCCCGA	TATTATTATGATAATTATGGTTATTA	TAATGAGGG	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGAATTACACCCCGATATTATTATGATAATTATGGTTATTATAATGAGGGTGCCTTTGACGTC	AKGITPRYYYDNYGYYNEGAFDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	218	31	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  F  S  N  Y  A  M  T  W  V  R  Q  G  P  G  K  G  L  
                    Query_6842   1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTGGATTCACGTTTAGCAACTATGCCATGACGTGGGTCCGCCAGGGTCCAGGGAAGGGGCTGG  90
V  87.6% (218/249)  IGHV3-23*01  47   .....................C..C............C.......G...........GC.............C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  V  S  G  S  S  T  G  R  Y  D  S  D  S  V  K  G  R  F  S  S  S  R  D  N  S  
                    Query_6842   91   AGTGGGTCTCAACTGTTAGTGGGAGTTCCACTGGGAGGTATGACTCAGACTCCGTGAAGGGCCGGTTCTCCAGTTCCAGAGACAATTCCA  180
V  87.6% (218/249)  IGHV3-23*01  137  ...........G..A.......T...GGTGG.A.C.CA..CT..G.......................A...TC................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      R  N  T  L  Y  L  Q  M  N  R  L  T  P  E  D  T  A  V  Y  Y  C  A  K  G  I  T  P  R  Y  Y  
                    Query_6842   181  GGAACACGCTGTATCTGCAAATGAACCGCCTGACACCCGAGGACACGGCCGTGTATTATTGTGCGAAAGGAATTACACCCCGATATTATT  270
V  87.6% (218/249)  IGHV3-23*01  227  A.........................A......G.G................A.....C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  84.6% (22/26)    IGHD3-22*01  2    -----------------------------------------------------------------------------------.....C.  8

                                      --CDR3-IMGT----------------------------->                                  
                                      Y  D  N  Y  G  Y  Y  N  E  G  A  F  D  V  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6842   271  ATGATAATTATGGTTATTATAATGAGGGTGCCTTTGACGTCTGGGGCCAAGGGACACTGGTCACCGTCTCCTCAG  345
D  84.6% (22/26)    IGHD3-22*01  9    ......G.AG.........--------------------------------------------------------  27
J  91.5% (43/47)    IGHJ3*01     4    ----------------------------...T.....T..................A.............T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_80771

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           330     1e-92
IGHD5-18*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGTT	TGGATACAG	GTTAAGGGAATCAAACTTGAACTCCACCTC	CGGTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGTTTGGATACAGGTTAAGGGAATCAAACTTGAACTCCACCTCCGGTGTGGACGTC	AGFGYRLRESNLNSTSGVDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6843   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCCGGATTCACCTTCAGCACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.1% (228/245)  IGHV3-33*01  47   ............................T..............T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  F  D  G  S  N  E  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6843   91   AGTGGGTGGCACTTATCTGGTTTGATGGATCTAATGAAAAGTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (228/245)  IGHV3-33*01  137  ...........G....A....A.......AG....A..T.C.................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  G  F  G  Y  R  L  R  E  
                    Query_6843   181  AGAACACGTTGTATTTAGAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTCTATTACTGTGCGGGGTTTGGATACAGGTTAAGGGAAT  270
V  93.1% (228/245)  IGHV3-33*01  227  ........C.....C.GC..................C...............G............-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD5-18*01  2    ----------------------------------------------------------------------.........-----------  10

                                      R3-IMGT------------------------>                                 
                                      S  N  L  N  S  T  S  G  V  D  V  W  G  Q  G  T  T  V  T  I  S  S 
                    Query_6843   271  CAAACTTGAACTCCACCTCCGGTGTGGACGTCTGGGGCCAAGGGACCACGGTCACCATCTCCTCA  335
J  95.7% (44/46)    IGHJ6*02     17   -------------------....A................................G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_264349

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           380     1e-107
IGHD5-12*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	TTC	TATAGTGGCTAC	CAGAAAGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGATTCTATAGTGGCTACCAGAAAGTTTTTGACTCT	ARFYSGYQKVFDS	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	70	4	0	94.6
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	104	10	0	91.2
CDR3-IMGT (germline)	289	294	6	5	1	0	83.3
Total	N/A	N/A	293	268	25	0	91.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  P  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  K  F  S  
                    Query_6844   2    AGGTTCAGCTGGTGCAGTCTGGACCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAAGTTTTCCA  91
V  91.5% (268/293)  IGHV5-51*01  2    ....G..................G.........................................A...G...........GC...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  V  A  I  I  Y  P  A  D  S  T  T  R  Y  
                    Query_6844   92   GTTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGGTGGCAATCATCTATCCTGCTGACTCTACTACCCGATACA  181
V  91.5% (268/293)  IGHV5-51*01  92   .C................................................A...GG.............G.......GA....A......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  L  Q  G  Q  V  T  I  S  A  D  K  S  T  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_6844   182  GTCCGTCCCTCCAAGGGCAGGTCACCATCTCAGCCGACAAGTCCACCAGTACCGCCTTCCTGCAGTGGAGTAGCCTGAAGGCCTCGGACA  271
V  91.5% (268/293)  IGHV5-51*01  182  .C......T.......C............................T...C.......A............C...................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  A  T  F  Y  C  A  R  F  Y  S  G  Y  Q  K  V  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6844   272  CCGCCACGTTTTACTGTGCAAGATTCTATAGTGGCTACCAGAAAGTTTTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  361
V  91.5% (268/293)  IGHV5-51*01  272  ......T..A.........G...-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD5-12*01  6    --------------------------............----------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------.......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_80772

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           302     3e-84
IGHD3-10*02                                                                                           14.1    8.3  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	CTATGTT	AAGGGGCTCTGATAG	TTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTATGTTAAGGGGCTCTGATAGTTTTAATACT	ATMLRGSDSFNT	250	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	63	36	27	3	6	75
FR2-IMGT	64	114	51	49	2	0	96.1
CDR2-IMGT	115	135	21	17	4	0	81
FR3-IMGT	136	249	114	102	12	0	89.5
CDR3-IMGT (germline)	250	253	4	4	0	0	100
Total	N/A	N/A	253	225	22	6	88.9


Alignments

                                      <--------FR1-IMGT---------><-------------CDR1-IMGT------------><--------------------FR2-IM
                                       T  L  S  L  T  C  N  V  S  G  G  S  I  I  I  S  T  N  G  Y  Y  W  G  W  I  R  Q  P  P  G 
                    Query_6845   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCATCATCATCAGTACAAATGGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGG  90
V  88.9% (225/253)  IGHV4-39*01  49   ...................C....................G..GT....------...................................  132
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S        S  Y  Y  W  G  W  I  R  Q  P  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  G  L  E  W  I  G  T  I  S  H  S  G  T  T  Y  Y  K  A  S  L  K  S  R  V  T  I  S  V  D 
                    Query_6845   91   AAGGGACTGGAGTGGATTGGGACTATCTCTCATAGTGGGACCACTTACTACAAGGCGTCCCTCAAGAGTCGAGTCACCATATCCGTCGAC  180
V  88.9% (225/253)  IGHV4-39*01  133  .....G................G.....A.T.........G...C........CC...............................A...  222
                                       K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-------------CDR3-IM
                                       T  S  K  N  Q  F  S  L  R  V  T  S  V  T  A  A  D  T  A  M  F  Y  C  A  T  M  L  R  G  S 
                    Query_6845   181  ACGTCGAAAAATCAGTTCTCCCTGAGGGTGACCTCTGTGACCGCCGCAGACACGGCTATGTTTTATTGTGCGACTATGTTAAGGGGCTCT  270
V  88.9% (225/253)  IGHV4-39*01  223  .....C..G..C.............A.C...G.........................G...A...C.......-----------------  295
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                   
D  100.0% (7/7)     IGHD3-10*02  7    -------------------------------------------------------------------------.......----------  13

                                      GT------------>                                  
                                       D  S  F  N  T  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6845   271  GATAGTTTTAATACTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  319
J  93.2% (41/44)    IGHJ3*02     7    -----....G...TC..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_86148

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           403     1e-114
IGHD2-15*01                                                                                           21.8    0.047 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGTTTTTC	GGATATTGTAG	GGATGGAAATTGTTACGCACTGGAGTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGTTTTTCGGATATTGTAGGGATGGAAATTGTTACGCACTGGAGTAT	ARDRFFGYCRDGNCYALEY	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  T  F  T  S  Y 
                    Query_6846   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACCTCTGGTTACACCTTTACCAGTTAC  91
V  94.5% (274/290)  IGHV1-18*04  7    ............................A..................................G.T....................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  L  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  T  Y  N  G  N  T  N  Y  A  Q 
                    Query_6846   92   GGTCTCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCGGCACTTACAATGGGAACACAAACTATGCACAG  181
V  94.5% (274/290)  IGHV1-18*04  97   ...A...G.................................................A..G..........T..................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  L  E  L  R  S  L  R  S  D  D  T  A 
                    Query_6846   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGATACATCCACGAGAACAGCGTACTTGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.5% (274/290)  IGHV1-18*04  187  ...C............................C...........C.....C...A...................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       L  Y  Y  C  A  R  D  R  F  F  G  Y  C  R  D  G  N  C  Y  A  L  E  Y  W  G  Q  G  T  L  V 
                    Query_6846   272  CTATATTACTGTGCGAGAGATAGGTTTTTCGGATATTGTAGGGATGGAAATTGTTACGCACTGGAGTATTGGGGCCAGGGAACCCTGGTC  361
V  94.5% (274/290)  IGHV1-18*04  277  G.G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (11/11)   IGHD2-15*01  2    ------------------------------...........-------------------------------------------------  12
J  100.0% (34/34)   IGHJ4*02     15   ---------------------------------------------------------------------.....................  35

                                                   
                                       T  V  S  S  
                    Query_6846   362  ACCGTCTCCTCAG  374
J  100.0% (34/34)   IGHJ4*02     36   .............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_264340

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         347     7e-98
IGHD6-13*01                                                                                           16.1    2.3  
IGHJ5*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGTGGAGTTACAACCTGTT	GCAGCTGTTGGTAC	GTCCCGATTCCTT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGTGGAGTTACAACCTGTTGCAGCTGTTGGTACGTCCCGATTCCTTGACCTC	AREVELQPVAAVGTSRFLDL	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  A  T  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6847     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGCCTATGCTACGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  94.4% (236/250)  IGHV3-30-3*01  47   ............................................AG........T..............................G....  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        D  W  V  A  L  I  S  S  D  G  S  D  K  N  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_6847     91   ACTGGGTGGCACTTATATCATCTGATGGAAGCGATAAAAACTACGCAGACTCCGTGAAGGGACGATTCTCCATCTCCAGAGACAATTCCA  180
V  94.4% (236/250)  IGHV3-30-3*01  137  .G.........G.........A..........A.....T......................C......A.....................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------------CD
                                        K  T  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  E  V  E  L  Q  P  V  
                    Query_6847     181  AGACCACGCTGTATCTGCAAATGAGCAGCCTGAGAGCTGAGGACACGGCTGTGTATTTCTGTGCGAGAGAGGTGGAGTTACAACCTGTTG  270
V  94.4% (236/250)  IGHV3-30-3*01  227  ...A....................A................................A............--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  85.7% (12/14)    IGHD6-13*01    8    -----------------------------------------------------------------------------------------.  8

                                        R3-IMGT------------------------>                                  
                                        A  A  V  G  T  S  R  F  L  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6847     271  CAGCTGTTGGTACGTCCCGATTCCTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  85.7% (12/14)    IGHD6-13*01    9    ....A.C......-----------------------------------------------------  21
J  97.5% (39/40)    IGHJ5*02       12   --------------------------....C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_264341

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           324     8e-91
IGHD6-19*01                                                                                           25.7    0.003
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAG	GAGTCGACATT	GCAGTGGCTGGTA	GATCTGCTGGTGA	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGGAGTCGACATTGCAGTGGCTGGTAGATCTGCTGGTGATTTTGATATG	AKGVDIAVAGRSAGDFDM	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  S  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6848   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTCAGCTCATACGGCATCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-30*18  47   .....................C.....................TAGC..T.....G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  G  N  T  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  D  S  
                    Query_6848   91   AGTGGGTGGCAGTAATTTCATATGATGGAGGTAACACATACTATGCAGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAGACGATTCCA  180
V  91.6% (228/249)  IGHV3-30*18  137  .............T..A............A....T.A................................C.............A......  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      I  N  T  L  Y  L  Q  M  T  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  G  V  D  I  A  V  A  
                    Query_6848   181  TTAATACGTTGTATCTGCAAATGACCAGCCTGAGAGCTGAGGACACGGCTGTGTATTTCTGTGCCAAAGGAGTCGACATTGCAGTGGCTG  270
V  91.6% (228/249)  IGHV3-30*18  227  AG..C...C...............A................................A......G....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (13/13)   IGHD6-19*01  8    --------------------------------------------------------------------------------..........  17

                                      IMGT--------------------->                                  
                                      G  R  S  A  G  D  F  D  M  W  G  Q  G  T  R  V  I  V  S  S  
                    Query_6848   271  GTAGATCTGCTGGTGATTTTGATATGTGGGGCCAAGGGACAAGGGTCATCGTCTCTTCAG  330
D  100.0% (13/13)   IGHD6-19*01  18   ...---------------------------------------------------------  20
J  93.2% (41/44)    IGHJ3*02     7    ----------------.........C................T.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_264342

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_6849   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTA  90
V  97.6% (282/289)  IGHV5-51*03  6    ..............................................................................C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_6849   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  97.6% (282/289)  IGHV5-51*03  96   .......................................................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6849   181  GTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  ........................C....C....A..................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6849   271  CATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  97.6% (282/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (15/15)   IGHD6-19*01  4    ----------------------------------...............----------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   ----------------------------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_264344

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           266     2e-73
IGHD6-13*01                                                                                           21.8    0.041
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	40	11	0	78.4
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	93	21	0	81.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	210	40	0	84


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  L  S  G  G  S  I  G  S  G  G  F  Y  S  N  W  Y  P  P  P  P  G  K  G 
                    Query_6850   1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGGCTCCATCGGCAGTGGCGGCTTCTACTCGAACTGGTACCCCCCGCCCCCCGGGAAAGGC  90
V  84.0% (210/250)  IGHV4-31*01  49   .....................G.................A.......T..T.A.....G..G....AT..G..A..A...A.....G...  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  D  I  H  Y  S  G  G  T  L  H  H  P  S  P  N  R  P  G  T  M  S  G  D  T  S 
                    Query_6850   91   CTGGGGTGGATTGGGGACATCCATTACAGCGGGGGCACCCTCCACCACCCGTCCCCTAACAGGCCAGGTACCATGTCAGGAGACACGTCC  180
V  84.0% (210/250)  IGHV4-31*01  139  ....A..........T.....T.......T...A.....TA.T..A.........TC..G..T.T..T......A....T.........T  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       N  K  P  F  S  L  R  L  T  S  V  T  A  P  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V 
                    Query_6850   181  AACAAACCGTTCTCCCTGAGGCTGACTTCTGTGACTGCCCCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTA  270
V  84.0% (210/250)  IGHV4-31*01  229  ..G..C.A...........A.....GC............G..................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD6-13*01  11   ------------------------------------------------------------------------...........-------  21

                                      ----------------->                                  
                                       G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6850   271  GGCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  98.0% (48/49)    IGHJ3*01     2    ---.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_264345

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           12.2    30   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGACGGGT	TGGCTG	CCC	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGACGGGTTGGCTGCCCGACGAC	ARGTGWLPDD	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  Y  C  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6851   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTACTACTGCAACTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  93.9% (229/244)  IGHV4-59*01  49   ...............................G..........A..........G.G..................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  N  T  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6851   91   TGGATTGGACATATCTACAACACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  93.9% (229/244)  IGHV4-59*01  139  ........GT.......TT...G.....G.............................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  T  G  W  L  P  D  D  W 
                    Query_6851   181  CAGTTCTCCTTGAACCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGACGGGTTGGCTGCCCGACGACTGG  270
V  93.9% (229/244)  IGHV4-59*01  229  .........C....G....G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  12   ------------------------------------------------------------------------......------------  17
J  95.0% (38/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------...T.....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_6851   271  GGCCAGGGAACCCTGGTTACCGTCTCCTCAG  301
J  95.0% (38/40)    IGHJ4*02     18   .................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_264347

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6852   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  96.4% (239/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_6852   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  96.4% (239/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_6852   181  AAGAACCAGTTCTCCCTGAGGCTCAGCTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  96.4% (239/248)  IGHV4-31*03  229  ...................A...G................................T...........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6852   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_71327

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           313     1e-87
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGACTAG	TGGAACGAC	TCTTGTGT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGACTAGTGGAACGACTCTTGTGTACTGGTTCGACCCC	ARTSGTTLVYWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	220	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  N  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  Q  L  E 
                    Query_6853   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAATACCTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAACAACTGGAG  90
V  91.7% (220/240)  IGHV4-59*08  49   ..................A.....................G..GT...................................GGG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  T  T  Y  S  P  S  L  K  S  R  V  T  M  S  I  D  T  S  K  N 
                    Query_6853   91   TGGATTGGTTATATCTCTTACAGTGGGAGCACCACTTATAGCCCCTCCCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCCAAGAAC  180
V  91.7% (220/240)  IGHV4-59*08  139  ........G.......A.................AC..C.A...........................A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  T  S  G  T  T  L  V  Y  W 
                    Query_6853   181  CAGTTCTCCCTGAGGCTGACGTCTGTGACCGCCGCAGACACGGCCATTTATTACTGTGCGCGGACTAGTGGAACGACTCTTGTGTACTGG  270
V  91.7% (220/240)  IGHV4-59*08  229  .............A.....GC........................G.G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD1-1*01   9    --------------------------------------------------------------------.........-------------  17
J  95.8% (46/48)    IGHJ5*02     4    -------------------------------------------------------------------------------------.....  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  I  L  V  A  V  S  S  
                    Query_6853   271  TTCGACCCCTGGGGCCAGGGAATCCTGGTCGCCGTCTCCTCAG  313
J  95.8% (46/48)    IGHJ5*02     9    ......................C.......A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_91654

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           388     4e-110
IGHD6-13*01                                                                                           18.0    0.56  
IGHJ5*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGTGG	GCAGCAGCT	ACA	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGTGGGCAGCAGCTACACGACCAC	AKDRGQQLHDH	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	249	1	0	99.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6854   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.6% (249/250)  IGHV3-23*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6854   91   AGTGGGTCTCAGGTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  99.6% (249/250)  IGHV3-23*01  137  ............C.............................................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  R  G  Q  Q  L  H  
                    Query_6854   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCGTGGGCAGCAGCTACACG  270
V  99.6% (249/250)  IGHV3-23*01  227  ......................................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD6-13*01  8    ----------------------------------------------------------------------------.........-----  16
J  97.6% (40/41)    IGHJ5*02     11   ----------------------------------------------------------------------------------------..  12

                                      ---->                                  
                                      D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6854   271  ACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.6% (40/41)    IGHJ5*02     13   ...C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_71325

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD2-21*02                                                                                           14.1    8.2   
IGHJ3*02                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAGAC	GGTGGTAACT	CCTGG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGACGGTGGTAACTCCTGGGATGCTTTTGATATC	ARQDGGNSWDAFDI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6855   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (239/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6855   91   TGGATTGGGTATATCTATTACACTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  ......................G......C......................................A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  D  G  G  N  S  W  D  A 
                    Query_6855   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGACAAGACGGTGGTAACTCCTGGGATGCT  270
V  98.4% (239/243)  IGHV4-59*01  229  ...................G...........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD2-21*02  11   ---------------------------------------------------------------------......G...-----------  20
J  100.0% (49/49)   IGHJ3*02     2    ------------------------------------------------------------------------------------......  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6855   271  TTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  313
J  100.0% (49/49)   IGHJ3*02     8    ...........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_192305

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           319     2e-89
IGHD4-4*01                                                                                            19.9    0.15 
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD4-4*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGCCTT	TGACTACTATAACTAC	TACTAT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGCCTTTGACTACTATAACTACTACTATTTCGACCCC	ARDAFDYYNYYYFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	20	4	0	83.3
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	123	24	21	3	0	87.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	232	218	14	0	94


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  N  L  T  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  I  I  
                    Query_6856   14   GTGCAGCCTCTGGATTCAACCTCACTAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAATTATTT  103
V  94.0% (218/232)  IGHV3-30*04  65   ..................C.T...G...C......................................................G....A.  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  Y  D  G  T  D  K  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  K  S  K  N  T  L  Y  L  
                    Query_6856   104  CATATGATGGAACTGATAAATACTACGCAGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAGACAAATCCAAGAACACGCTGTATCTAC  193
V  94.0% (218/232)  IGHV3-30*04  155  ............G.A....................................C...............T....................G.  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  A  F  D  Y  Y  N  Y  Y  Y  F  D  P  
                    Query_6856   194  AGATGAACAGCCTGAGAGTTGAGGACACGGCTGTATATTACTGTGCGAGAGACGCCTTTGACTACTATAACTACTACTATTTCGACCCCT  283
V  94.0% (218/232)  IGHV3-30*04  245  .A................C...............G.................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  87.5% (14/16)    IGHD4-4*01   1    ----------------------------------------------------------.......AG.......----------------  16
J  97.7% (42/43)    IGHJ5*02     9    --------------------------------------------------------------------------------..........  18

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6856   284  GGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  316
J  97.7% (42/43)    IGHJ5*02     19   ............................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_192306

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_6857   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.8% (277/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_6857   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_6857   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6857   271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.8% (277/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_6857   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_192307

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     8e-98
IGHD5-18*01                                                                                           18.0    0.64 
IGHJ5*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	261	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	18	6	0	75
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	104	10	0	91.2
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	245	23	0	91.4


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  
                    Query_6858   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGC  90
V  91.4% (245/268)  IGHV4-59*01  26   ................T.....................................G........G.AGT.A....................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  S  P  G  K  G  L  E  W  I  G  Y  I  H  Y  S  G  I  T  N  Y  S  P  S  L  K  S  R  A  S  
                    Query_6858   91   AGTCCCCAGGGAAGGGACTGGAGTGGATTGGATATATCCATTACAGTGGCATTACCAACTACAGCCCCTCCCTCAAGAGTCGGGCCTCCA  180
V  91.4% (245/268)  IGHV4-59*01  116  ..C............................G......T..........G.GC..........A..................A.T.A...  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  S  Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  
                    Query_6858   181  TTTCAGTAGACACGTCCAAGAGCCAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATC  270
V  91.4% (245/268)  IGHV4-59*01  206  .A...................A...............G.....C..................A.......G.................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -------------CDR3-IMGT--------------------->                                  
                                      P  T  G  S  G  Y  N  F  G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6858   271  CTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  348
D  83.3% (15/18)    IGHD5-18*01  1    ---------.......C.G..A.....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    -----------------------------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_192300

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCG	GCAGTGGCCGGTAC	GGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCGGCAGTGGCCGGTACGGGATTGACTAC	AKDRGSGRYGIDY	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  T  P  G  K  G  L  E  
                    Query_6859   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGCTGGATCCGGCAGACCCCAGGGAAGGGACTGGAGT  93
V  93.9% (229/244)  IGHV4-59*01  50   .....TCC...A....C...........................T.......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  G  G  G  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N  
                    Query_6859   94   GGATTGGGTATATCTATTATGGTGGGGGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAACC  183
V  93.9% (229/244)  IGHV4-59*01  140  ...................CA.....A............................................G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  D  R  G  S  G  R  Y  G  I  
                    Query_6859   184  AGTTCTCCCTGAGGCTGAACTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAAAGATCGCGGCAGTGGCCGGTACGGGATTG  273
V  93.9% (229/244)  IGHV4-59*01  230  ............A.....G...........................G.............G...--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  92.9% (13/14)    IGHD6-19*01  8    ---------------------------------------------------------------------........T.....-------  21
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_6859   274  ACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  312
J  97.6% (41/42)    IGHJ4*02     10   ..................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_192301

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           410     1e-116
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	289	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	292	277	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  
                    Query_6860   2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCA  91
V  94.9% (277/292)  IGHV5-51*01  2    ..G..............................................................A...G............C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  H  W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  
                    Query_6860   92   CCCACTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACA  181
V  94.9% (277/292)  IGHV5-51*01  92   G.T......................G.T..........................G..............G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  
                    Query_6860   182  GCCCGTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACA  271
V  94.9% (277/292)  IGHV5-51*01  182  ...................G.........................T.........................A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------CDR3-IMGT--------->                                 
                                      T  A  I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6860   272  CCGCCATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  351
V  94.9% (277/292)  IGHV5-51*01  272  .......G..T...........----------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ----------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_301528

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            330     1e-92
IGHD6-13*01                                                                                           12.2    37   
IGHJ1*01                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD6-13*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GTCCCTACGCTCAAACATCGGCTGG	AGCAGGACCTGG	CCATCTTGAT	CACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGTCCCTACGCTCAAACATCGGCTGGAGCAGGACCTGGCCATCTTGATCAC	AKGPYAQTSAGAGPGHLDH	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	61	8	0	88.4
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	289	250	39	0	86.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  I  V  C  K  A  S  G  Y  T  F  T  S  F 
                    Query_6861   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGATCGTGTGCAAGGCTTCCGGATACACGTTCACTAGTTTT  91
V  86.5% (250/289)  IGHV1-3*01   7    .....T...........G.................................G.TTCC...........T........C........C.A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  V  H  W  V  R  Q  A  P  G  Q  R  M  E  W  I  G  W  I  N  I  G  N  G  N  S  E  H  S  Q 
                    Query_6861   92   GCTGTCCATTGGGTGCGCCAGGCCCCCGGACAAAGGATGGAGTGGATTGGATGGATCAACATCGGCAATGGAAATTCAGAACATTCACAG  181
V  86.5% (250/289)  IGHV1-3*01   97   ...A.G..............................C.T........G............GCT........T..CA..A..T........  186
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  F  Q  G  R  V  T  I  T  R  D  T  S  A  T  T  A  Y  M  E  L  T  G  L  K  S  E  D  T  A 
                    Query_6861   182  AATTTCCAGGGCAGGGTCACCATTACCAGGGACACTTCCGCGACCACAGCCTACATGGAACTGACCGGCCTAAAATCTGAGGACACGGCC  271
V  86.5% (250/289)  IGHV1-3*01   187  ..G...........A....................A.......G...............G....G.A....G.G......A........T  276
                                       K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       I  Y  Y  C  A  K  G  P  Y  A  Q  T  S  A  G  A  G  P  G  H  L  D  H  W  G  Q  G  S  Q  V 
                    Query_6861   272  ATTTACTACTGTGCGAAAGGTCCCTACGCTCAAACATCGGCTGGAGCAGGACCTGGCCATCTTGATCACTGGGGCCAGGGGAGCCAGGTC  361
V  86.5% (250/289)  IGHV1-3*01   277  G.G..T..........G..-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  83.3% (10/12)    IGHD6-13*01  7    --------------------------------------------.....C.G....----------------------------------  18
J  91.9% (34/37)    IGHJ1*01     16   ------------------------------------------------------------------..............C.C..T....  39

                                                   
                                       T  V  S  S  
                    Query_6861   362  ACCGTCTCCTCAG  374
J  91.9% (34/37)    IGHJ1*01     40   .............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_290388

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           302     3e-84
IGHD5-12*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAGA	TGGCTTCAATTAC	AGTCAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGATGGCTTCAATTACAGTCAGGACTAC	ARLDGFNYSQDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	218	25	0	89.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  K  G  G  S  F  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_6862   1    ACCCTGTCCCTCACCTGCGCTGTCAAAGGTGGGTCCTTCAATCATTTCTACTGGAGTTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  89.7% (218/243)  IGHV4-34*01  49   ........................T.T.............G.GG..A.........C............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  K  Y  N  P  S  L  E  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_6862   91   TGGATTGGCGAAATCAATCACAGTGGACGCACCAAGTACAACCCGTCCCTCGAGAGTCGAGTCACCATCTCATTGGACACCTCCAAAAAC  180
V  89.7% (218/243)  IGHV4-34*01  139  ........G...........T......A.......C...............A................A...G.A.....G.....G...  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  K  L  K  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  D  G  F  N  Y  S  Q  D 
                    Query_6862   181  CACTTCTCCCTGAAACTGAAGTCTGTCACCGCCGCGGACACGGCTCTTTATTACTGTGCGAGACTAGATGGCTTCAATTACAGTCAGGAC  270
V  89.7% (218/243)  IGHV4-34*01  229  ..G...........G....GC.....G..................G.G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (11/13)    IGHD5-12*01  11   --------------------------------------------------------------------.....A.G.....---------  23
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       Y  W  G  K  G  T  L  V  T  V  S  S  
                    Query_6862   271  TACTGGGGCAAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   .........C...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_290387

Length=318
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           280     9e-78
IGHD5-18*01                                                                                           12.2    29   
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTTAT	CTTTGTTCAGGAGCATCA	GGTTAC	GGG	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAGGAGCATCAGGTTACGGGTGGCTCGACCCC	SGASGYGWLDP	230	262	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	223	108	99	9	0	91.7
Total	N/A	N/A	211	195	16	0	92.4


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  L  S  D  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_6863   13   GTCTGGATTCACCTTGAGTGATTATGGAATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  92.4% (195/211)  IGHV3-33*03  72   ...............C...AGC.....C..............................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  I  K  K  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  F  L  Q  M  S
                    Query_6863   103  TGGAATTAAGAAATACTATGCAGAGTCTGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCAAGAACACCCTGTTTCTGCAGATGAG  192
V  92.4% (195/211)  IGHV3-33*03  162  .....G...T..............C..C..............................A.............G....A......A....A  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------CDR3-IMGT----------->                    
                                        S  L  R  A  E  D  T  A  L  Y  L  C  S  G  A  S  G  Y  G  W  L  D  P  W  G  Q  G  T  L  V
                    Query_6863   193  CAGCCTGAGAGCCGAGGACACGGCTCTTTATCTTTGTTCAGGAGCATCAGGTTACGGGTGGCTCGACCCCTGGGGCCAGGGAACCCTGGT  282
V  92.4% (195/211)  IGHV3-33*03  252  .........................G.G...-----------------------------------------------------------  282
                                        S  L  R  A  E  D  T  A  V  Y                                                            
D  100.0% (6/6)     IGHD5-18*01  15   -------------------------------------------------......-----------------------------------  20
J  97.8% (45/46)    IGHJ5*02     6    ----------------------------------------------------------...T............................  37

                                                    
                                        T  V  S  S  
                    Query_6863   283  CACCGTCTCCTCAG  296
J  97.8% (45/46)    IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30726981


Query= Query_301527

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTC	ARHGDDSGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	283	8	0	97.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_6864   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCACCTA  90
V  97.3% (283/291)  IGHV5-51*01  6    ..............................A...................A...................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  T  R  Y  S  P
                    Query_6864   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  97.3% (283/291)  IGHV5-51*01  96   ........G.................................................T...............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6864   181  GTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.3% (283/291)  IGHV5-51*01  186  .......C...................A.C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  D  S  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_6864   271  CATGTATTACTGTGCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  97.3% (283/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------........A.....-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------.......AC.....T.............................  49

                                                   
                                        T  V  S  S 
                    Query_6864   361  CACCGTCTCCTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_301524

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            344     6e-97
IGHD2-21*01                                                                                           14.1    8.6  
IGHJ4*01                                                                                              27.6    0.002


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD2-21*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCAG	CCGTTACGAGATCAACGTTGA	ATATTGGGGT	CGCA	GAACC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	43	3	0	93.5
CDR1-IMGT	47	76	30	24	6	0	80
FR2-IMGT	77	127	51	49	2	0	96.1
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	103	11	0	90.4
CDR3-IMGT (germline)	263	270	8	7	1	0	87.5
Total	N/A	N/A	270	245	25	0	90.7


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  S  L  P  E  F  S  L  N  T  D  G  V  A  V  S  W  I  R
                    Query_6865   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCAGCCTCCCTGAGTTCTCCCTCAACACTGATGGAGTGGCTGTGAGTTGGATCCG  90
V  90.7% (245/270)  IGHV2-5*01   30   ......................................C.T..T...G......A....G....AG........G....G.C........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  G  D  Q  R  Y  S  P  S  L  R  S  R  L  T
                    Query_6865   91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGGTGATCAGCGATACAGCCCATCTCTGAGGAGCCGGCTCAC  180
V  90.7% (245/270)  IGHV2-5*01   120  ..................................................A....A....C................A....A.......  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT---------------------------------------------------->        
                                        I  S  K  D  T  S  K  N  Q  V  V  L  K  M  T  N  M  E  P  V  D  T  G  T  Y  F  C  A  R  S
                    Query_6865   181  CATCAGTAAGGACACCTCCAAAAACCAGGTGGTCCTGAAGATGACCAACATGGAGCCTGTGGACACAGGCACATATTTCTGTGCACGCAG  270
V  90.7% (245/270)  IGHV2-5*01   210  .....CC.............................T.CA..............C.............C........A........A...  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                                                                          
                                        R  Y  E  I  N  V  E  Y  W  G  R  R  T  L  V  A  V 
                    Query_6865   271  CCGTTACGAGATCAACGTTGAATATTGGGGTCGCAGAACCCTGGTCGCCGTC  322
D  90.0% (9/10)     IGHD2-21*01  4    ---------------------......T...---------------------  13
J  94.1% (16/17)    IGHJ4*01     25   -----------------------------------...........A.....  41


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_301525

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           344     7e-97
IGHD6-25*01                                                                                           12.2    34   
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-25*01	IGHJ3*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACT	CGGCTA	AGGTATCGC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTCGGCTAAGGTATCGCTTTGACGTA	DDSAKVSL*R	282	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	167	24	19	3	2	79.2
FR3-IMGT	168	281	114	101	13	0	88.6
CDR3-IMGT (germline)	282	285	4	4	0	0	100
Total	N/A	N/A	286	255	29	2	89.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  P  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T  S  Y 
                    Query_6866   2    CAGCTGGTGCAGTCTGGACCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCATGTAAGGCTTCTGGATATATCTTCACCAGTTAT  91
V  89.2% (255/286)  IGHV1-18*01  7    ..................G.....................................C..C...........T..C.C...T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  T  P  G  E  G  L  E  W  M  G  W  I    S  L  P  *  K  H  R  V  F  T  
                    Query_6866   92   GGCATTAGTTGGGTGCGACAGACCCCTGGAGAAGGGCTTGAGTGGATGGGATGGATCA--GCTTACCATGAAAACACAGAGTATTCACAG  179
V  89.2% (255/286)  IGHV1-18*01  97   ..T..C..C............G........C...........................GC......A...GT......A.C...G.....  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                      E  V  A  G  Q  S  H  H  Y  R  R  H  I  H  E  Y  S  L  H  G  V  E  G  P  Q  I  *  R  H  G  
                    Query_6866   180  AAGTTGCAGGGCAGAGTCACCATTACCGCAGACACATCCACGAGTACAGCCTACATGGAGTTGAGGGGCCTCAGATCTGACGACACGGCC  269
V  89.2% (255/286)  IGHV1-18*01  187  ...C.C.................G...A................C...............C.....A....G..................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                      P  V  F  L  C  D  D  S  A  K  V  S  L  *  R  M  G  P  R  D  N  G  H  R  L  L   
                    Query_6866   270  CTGTATTTCTGTGCGACGACTCGGCTAAGGTATCGCTTTGACGTATGGGGCCAAGGGACAATGGTCACCGTCTCCTCAG  348
V  89.2% (255/286)  IGHV1-18*01  277  G......A........---------------------------------------------------------------  292
                                       V  Y  Y  C  A                                                                 
D  100.0% (6/6)     IGHD6-25*01  12   ---------------------......----------------------------------------------------  17
J  93.0% (40/43)    IGHJ3*01     8    ------------------------------------.....T..C.............................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_290383

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           402     3e-114
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	274	17	0	94.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_6867   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  94.2% (274/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_6867   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  94.2% (274/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  H  K  S  I  S  T  A  Y  L  Q  W  G  S  R  V  A  S  A  T  A
                    Query_6867   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCCACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCGGGTGGCCTCGGCCACCGC  270
V  94.2% (274/291)  IGHV5-51*01  186  .......C.......................G.............C...........G......A......T.AA........A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_6867   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  94.2% (274/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_6867   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_290382

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_6868   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_6868   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_6868   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  A  S  V  S  S 
                    Query_6868   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGCCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  89.6% (43/48)    IGHJ6*02     15   ------------------.....T.......T................A...T.A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_301520

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_6869   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_6869   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  R  K  A  W  D  T  A
                    Query_6869   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCGGAAGGCCTGGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .......C.....................................C...........G......A......T........C.........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_6869   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_6869   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_71322

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           307     1e-85
IGHD3-9*01                                                                                            27.6    7e-04
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGGGGGGC	TGACTGGTTATTAT	CGAACGGGGACTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGGGGGGCTGACTGGTTATTATCGAACGGGGACTTT	AKDRGADWLLSNGDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  Y  N  Y  G  F  L  W  V  R  Q  T  A  G  K  G  L  
                    Query_6870   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTCTATAACTATGGCTTCCTCTGGGTCCGCCAGACTGCAGGCAAGGGGCTGG  90
V  89.2% (223/250)  IGHV3-30*18  47   ....................................CC...AG..G.......A.G.A.............G..C...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  T  I  S  H  D  A  N  N  E  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_6870   91   AGTGGGTGGCAACGATATCACATGATGCAAATAATGAATATTATGCAGACTCAGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCC  180
V  89.2% (223/250)  IGHV3-30*18  137  ...........GTT......T......G..G....A....C...........C....A...............................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      Q  N  T  V  Y  L  Q  M  D  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  R  G  A  D  W  L  
                    Query_6870   181  AGAACACGGTGTATCTGCAAATGGACAGCCTGAGACCTGAAGACACGGCTGTCTACTACTGTGCGAAAGATCGGGGGGCTGACTGGTTAT  270
V  89.2% (223/250)  IGHV3-30*18  227  ........C..............A...........G....G...........G..T..............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (14/14)   IGHD3-9*01   15   -------------------------------------------------------------------------------...........  25

                                      ---------------->                                
                                      L  S  N  G  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6870   271  TATCGAACGGGGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
D  100.0% (14/14)   IGHD3-9*01   26   ...----------------------------------------------  28
J  100.0% (32/32)   IGHJ4*02     15   -----------------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_223200

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           324     8e-91
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCCATCTTGGCGG	TTACGCTTATTGGAGTGGTT	TTTCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCCATCTTGGCGGTTACGCTTATTGGAGTGGTTTTTCTCTTGACTAC	ARDPHLGGYAYWSGFSLDY	237	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	20	23	4	4	0	0	100
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	107	7	0	93.9
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	225	216	9	0	96


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_6871   20   GTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  109
V  96.0% (216/225)  IGHV3-33*01  72   .....................C....................................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  E  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  V  N  S  K  N  R  L  Y  L  Q  M  N
                    Query_6871   110  TGGAAGTAATGAATTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCAAGAGTCAATTCCAAGAACAGGTTGTATCTGCAAATGAA  199
V  96.0% (216/225)  IGHV3-33*01  162  ..........A...A....................................C....A..............C.C................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------------CDR3-IMGT--------------------
                                        S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  P  H  L  G  G  Y  A  Y  W  S  G  F  S  L  D
                    Query_6871   200  CAGCCTGAGAGCCGACGACACGGCTGTATATTACTGTGCGAGAGATCCCCATCTTGGCGGTTACGCTTATTGGAGTGGTTTTTCTCTTGA  289
V  96.0% (216/225)  IGHV3-33*01  252  ...............G...........G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  90.0% (18/20)    IGHD3-3*01   4    ------------------------------------------------------------.....A..T...........----------  23
J  100.0% (42/42)   IGHJ4*02     7    --------------------------------------------------------------------------------------....  10

                                      --->                                  
                                        Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6871   290  CTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (42/42)   IGHJ4*02     11   ......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_91653

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           350     8e-99
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCATC	ATTACTATGCTAACAGTGATTATT	TCGTAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCATCATTACTATGCTAACAGTGATTATTTCGTAGAC	ARGHHYYANSDYFVD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  V  R  Q  H  P  G  K  G 
                    Query_6872   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*03  49   .............................TGG.......A..........................A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  S  A  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_6872   91   CTGGAGTGGATTGGCTGCATCTATTACAGTGGGAGCGCCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCGGTCGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*03  139  ..............G.A...................A........................................A..A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  G  H  H  Y  Y  A  N 
                    Query_6872   181  AAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACTCGGCCGTGTATTACTGTGCGAGAGGGCATCATTACTATGCTAAC  270
V  94.8% (237/250)  IGHV4-31*03  229  .....................C...G...................A........................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  83.3% (20/24)    IGHD3-22*01  3    ----------------------------------------------------------------------------.........A..GT  16

                                      ----------------->                                  
                                       S  D  Y  F  V  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6872   271  AGTGATTATTTCGTAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  83.3% (20/24)    IGHD3-22*01  17   ....G.....------------------------------------------  26
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_270900

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         343     2e-96
IGHD6-19*01                                                                                           14.1    9.4  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AACATACAT	CAGTGTCTGG	GGGATAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATACATCAGTGTCTGGGGGATATTGGTTCGACCCC	AKHTSVSGGYWFDP	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	94	20	0	82.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	253	34	0	88.2


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  D  S  G  H  T  F  F  N  H
                    Query_6873     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGAATCTCCTGTAAGGATTCTGGACACACCTTTTTCAACCA  90
V  88.2% (253/287)  IGHV5-10-1*01  6    ...................................................G.............G.......T...G....AC..G.T.  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Q  S  H  Y  S  P
                    Query_6873     91   CTGGATCAGTTGGGTGCGCCAGATGCCCGGTAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTCAAAGTCACTATAGTCC  180
V  88.2% (253/287)  IGHV5-10-1*01  96   .........C....................G..........................................T.T.CCA....C..C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          P  F  E  G  H  V  T  L  S  V  D  K  A  T  S  T  A  Y  L  Q  W  S  S  L  K  T  S  D  T  G
                    Query_6873     181  GCCCTTCGAAGGCCATGTCACACTCTCAGTTGACAAGGCCACCAGTACTGCCTACCTGCAGTGGAGCAGTCTCAAGACCTCGGACACCGG  270
V  88.2% (253/287)  IGHV5-10-1*01  186  .T.....C.......C.....CA......C.......T...T...C.......................C..G...G............C  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------CDR3-IMGT--------------->                                  
                                          F  Y  F  C  A  K  H  T  S  V  S  G  G  Y  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6873     271  CTTTTATTTTTGTGCGAAACATACATCAGTGTCTGGGGGATATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  359
V  88.2% (253/287)  IGHV5-10-1*01  276  .A.G....AC.......------------------------------------------------------------------------  292
                                          M  Y  Y  C  A                                                                          
D  90.0% (9/10)     IGHD6-19*01    9    --------------------------.....G....-----------------------------------------------------  18
J  97.8% (45/46)    IGHJ5*02       6    -------------------------------------------...................................C..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_71320

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           417     6e-119
IGHD6-19*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              106     4e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTAGTAGTATTGGG	GCAGTGGCTG	ACCG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTAGTAGTATTGGGGCAGTGGCTGACCGCTACTATTACTACGGTATGGACGTC	ARSSSIGAVADRYYYYGMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_6874   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  96.2% (278/289)  IGHV1-69*06  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  M  F  G  T  T  N  Y  A  Q
                    Query_6874   91   TGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGGGAATCATTCCTATGTTTGGTACAACAAACTACGCACA  180
V  96.2% (278/289)  IGHV1-69*06  96   ..C................................................A..G.....C.....C.........G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  N  T  A  Y  M  E  L  S  S  L  R  S  E  E  P  A
                    Query_6874   181  GAAATTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGAGCCGGC  270
V  96.2% (278/289)  IGHV1-69*06  186  ...G........................................G.......................................CA....  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        V  Y  Y  C  A  R  S  S  S  I  G  A  V  A  D  R  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T
                    Query_6874   271  CGTGTATTACTGTGCGAGATCTAGTAGTATTGGGGCAGTGGCTGACCGCTACTATTACTACGGTATGGACGTCTGGGGCCAAGGGACCAC  360
V  96.2% (278/289)  IGHV1-69*06  276  ...................-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD6-19*01  8    ----------------------------------..........----------------------------------------------  17
J  98.3% (57/58)    IGHJ6*02     5    ------------------------------------------------......C...................................  46

                                                      
                                        V  T  V  S  S 
                    Query_6874   361  GGTCACCGTCTCCTCA  376
J  98.3% (57/58)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_86143

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTTTATTCCCT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTATTCCCTCTACGGTATGGACGTC	ARHGDDTGGYLYSLYGMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	71	0	0	100
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	292	277	15	0	94.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  
                    Query_6875   7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTTCCACTT  96
V  94.9% (277/292)  IGHV5-51*01  5    ...............................................................................C...A...GC.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  H  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  
                    Query_6875   97   ATTGGATCGCCTGGGTGCGCCAGATGCACGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAGTC  186
V  94.9% (277/292)  IGHV5-51*01  95   .C.......G.................C...............................T.................A..........C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  
                    Query_6875   187  CGTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCG  276
V  94.9% (277/292)  IGHV5-51*01  185  ........C.....................C...............C...........................A...............  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------------CDR3-IMGT----------------------->                   
                                      A  I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  S  L  Y  G  M  D  V  W  G  Q  G  T  T  
                    Query_6875   277  CCATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTATTCCCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGG  366
V  94.9% (277/292)  IGHV5-51*01  275  ....G.................--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  85.7% (12/14)    IGHD1-26*01  4    ------------------------------...G....A.....----------------------------------------------  17
J  98.0% (48/49)    IGHJ6*02     14   -------------------------------------------------------...................................  48

                                                    
                                      V  T  V  S  S 
                    Query_6875   367  TCACCGTCTCGTCA  380
J  98.0% (48/49)    IGHJ6*02     49   ..........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_219757

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           321     7e-90
IGHD3-3*01                                                                                            23.8    0.011
IGHJ5*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCTGTCCCGC	ATTATGGTTTTTGGAATGATTATT	CCAAAATCTAACTCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTGTCCCGCATTATGGTTTTTGGAATGATTATTCCAAAATCTAACTCTTTCGACACC	ARGLSRIMVFGMIIPKSNSFDT	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  Y  G  G  S  F  N  G  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6876   1    ACCCTGTCCCTCACCTGCTCTGTCTATGGTGGGTCGTTCAATGGTCACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  91.8% (225/245)  IGHV4-34*01  49   ..................G................C....G....T............................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  D  T  N  Y  N  S  S  L  K  S  R  V  T  L  S  V  D  T  S  R  N 
                    Query_6876   91   TGGATTGGGGAAATTTCTCATAGTGGAGACACCAACTACAACTCGTCCCTCAAGAGTCGAGTCACCTTGTCAGTTGACACGTCCAGGAAC  180
V  91.8% (225/245)  IGHV4-34*01  139  ..............CAA..........AG.............C.......................A.A.....A..........A....  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  R  L  T  S  L  T  V  A  D  T  A  V  Y  Y  C  A  R  G  L  S  R  I  M  V  F  G 
                    Query_6876   181  CAGTTCTCCCTGAGGCTGACCTCCCTGACCGTCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCCTGTCCCGCATTATGGTTTTTGGA  270
V  91.8% (225/245)  IGHV4-34*01  229  .............A.....G...TG......C...............G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  83.3% (20/24)    IGHD3-3*01   3    ---------------------------------------------------------------------------....C.A........  17

                                      -IMGT--------------------------->                                  
                                       M  I  I  P  K  S  N  S  F  D  T  W  G  P  G  T  L  V  T  V  S  S  
                    Query_6876   271  ATGATTATTCCAAAATCTAACTCTTTCGACACCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  337
D  83.3% (20/24)    IGHD3-3*01   18   G..G.....----------------------------------------------------------  26
J  95.3% (41/43)    IGHJ5*02     9    ------------------------......C.........A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_219756

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ATTTCT	TATGGTTCGGGGAGT	CACGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAATTTCTTATGGTTCGGGGAGTCACGGGTGGTTCGACCCC	ARISYGSGSHGWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  K  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6877   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAAATACTTCTGGAGTTGGATCCGTCAGCCCCCCGGGAAGGGCCTGGAG  90
V  90.9% (221/243)  IGHV4-59*01  49   ...............................G.........T.GT....A......C........G........A........A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  I  G  T  T  S  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6877   91   TGGATTGGTTACATCTATTACATTGGGACCACCAGCTACAACCCCTCCCTCGAGAGTCGCGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  90.9% (221/243)  IGHV4-59*01  139  ........G..T..........G.....G.....A................A.......A..............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  R  A  M  Y  Y  C  A  R  I  S  Y  G  S  G  S  H  G 
                    Query_6877   181  CAGTTCTCCCTGAAGCTAACGTCTGTGACCGCTGCGGACAGGGCCATGTATTACTGTGCGCGAATTTCTTATGGTTCGGGGAGTCACGGG  270
V  90.9% (221/243)  IGHV4-59*01  229  .................G.GC...................C....G..............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (15/15)   IGHD3-10*01  8    ---------------------------------------------------------------------...............------  22

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6877   271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (46/46)   IGHJ5*02     6    ..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_128848

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*04                                                                                           380     1e-107
IGHD1-26*01                                                                                           12.2    36    
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*04	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GATGTTTC	TATAGT	CGCGTTGGCTGCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTTTCTATAGTCGCGTTGGCTGCTTCTTTGACTAC	ARCFYSRVGCFFDY	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	68	6	0	91.9
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	19	5	0	79.2
FR3-IMGT	177	290	114	103	11	0	90.4
CDR3-IMGT (germline)	291	294	4	4	0	0	100
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  D  C  A  A  S  G  F  T  F  S  
                    Query_6878   4    AGGTGCAGCTGGTGCAGTCTGGAGGAGGGTTGGTTCAGCCTGGGGGGTCCCTGAGACTCGACTGTGCAGCCTCTGGATTCACCTTTAGCG  93
V  91.8% (267/291)  IGHV3-23*04  2    ..............G.......G.....C.....A........................TC............................A  91
                                         V  Q  L  V  E  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      G  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  S  G  S  G  G  T  T  Y  Y  
                    Query_6878   94   GCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATCAGTGGCAGTGGAGGCACCACATACTACG  183
V  91.8% (267/291)  IGHV3-23*04  92   .........................................................C...T.....T.....T..T.G...........  181
                                      S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  D  S  V  K  G  R  F  T  M  S  R  D  N  S  K  Y  T  V  Y  L  Q  M  D  S  L  R  P  E  D  
                    Query_6878   184  CAGACTCCGTGAAGGGCCGCTTCACCATGTCCAGAGACAATTCGAAGTACACGGTGTATCTGCAAATGGATAGCCTGAGACCTGAGGACA  273
V  91.8% (267/291)  IGHV3-23*04  182  ...................G........C..............C...A.....C..............A.C.........G.C.......  271
                                      A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  V  Y  Y  C  A  R  C  F  Y  S  R  V  G  C  F  F  D  Y  W  G  Q  G  V  L  V  T  V  S  
                    Query_6878   274  CGGCTGTGTATTACTGTGCGAGATGTTTCTATAGTCGCGTTGGCTGCTTCTTTGACTACTGGGGCCAGGGAGTGTTGGTCACCGTCTCCT  363
V  91.8% (267/291)  IGHV3-23*04  272  ....C..A.............---------------------------------------------------------------------  292
                                      T  A  V  Y  Y  C  A                                                                       
D  100.0% (6/6)     IGHD1-26*01  3    -----------------------------......-------------------------------------------------------  8
J  90.9% (40/44)    IGHJ4*02     5    -------------------------------------------------......................ACCC...............  45

                                         
                                      S  
                    Query_6878   364  CAG  366
J  90.9% (40/44)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_219754

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHD5-12*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGCGGGA	TGGCTAC	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGACAGGTGCGGGATGGCTACCTGACTAC	VTGAGWLPDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	5	2	0	71.4
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  G  Y  Y  L  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6879   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTGGTTATTATTTGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*01  49   ......................................C...A....C..C.G..G.................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  L  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_6879   91   TGGCTTGGTTTGATCTCTTACAGCGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAACAAC  180
V  92.2% (225/244)  IGHV4-59*01  139  ...A....G.AT....A......T.....C........................................................G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  V  T  G  A  G  W  L  P  D  Y  W 
                    Query_6879   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCCTGTATTATTGTGTGACAGGTGCGGGATGGCTACCTGACTACTGG  270
V  92.2% (225/244)  IGHV4-59*01  229  .............................................G.......C....C..G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-12*01  11   ------------------------------------------------------------------------.......-----------  17
J  100.0% (41/41)   IGHJ4*02     8    --------------------------------------------------------------------------------..........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_6879   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (41/41)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_219753

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD5-12*01                                                                                           14.1    8.6  
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	CTTAGACTCCCGTGT	TGGCTAC	CATCGC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGACTTAGACTCCCGTGTTGGCTACCATCGCGCTGATTACTTCCACCAC	AKDLDSRVGYHRADYFHH	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  M  F  D  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6880   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCATGTTTGACAACTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-23*01  47   .....................C..............CC...AG..G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  V  S  G  G  G  F  S  S  Y  Y  A  D  S  V  R  G  R  F  T  A  S  R  D  S  S  
                    Query_6880   91   AGTGGGTCTCAGGTGTTAGTGGGGGTGGTTTTAGTTCATACTACGCAGACTCCGTGAGGGGCCGGTTCACCGCCTCAAGAGACAGTTCCA  180
V  90.4% (226/250)  IGHV3-23*01  137  ............C.A.......TA.....GG...CA.....................A.............AT...C.......A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  L  D  S  R  V  G  
                    Query_6880   181  AGAACACACTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAGGACTTAGACTCCCGTGTTGGCT  270
V  90.4% (226/250)  IGHV3-23*01  227  .......G........G...................................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD5-12*01  11   -------------------------------------------------------------------------------------.....  15

                                      IMGT--------------------->                                  
                                      Y  H  R  A  D  Y  F  H  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6880   271  ACCATCGCGCTGATTACTTCCACCACTGGGGCCAGGGCACCCTGGTCACTGTCTCCTCAG  330
D  100.0% (7/7)     IGHD5-12*01  16   ..----------------------------------------------------------  17
J  94.2% (49/52)    IGHJ1*01     1    --------.....A........G..........................C..........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_219752

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           358     4e-101
IGHD2-2*03                                                                                            10.3    122   
IGHJ3*01                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-2*03	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTTTAGGAAAACTTCCAGT	TGGAT	G	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTTTAGGAAAACTTCCAGTTGGATGGATGCCTTTGATGTC	ARGFRKTSSWMDAFDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  N  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6881   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCACTAATTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-33*01  47   ..........................................G..GC.A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  K  K  D  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6881   91   AGTGGGTGGCCGTTATATGGTATGATGGAAGTAAAAAAGACTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (239/249)  IGHV3-33*01  137  ..........A.......................T...T......C............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  G  T  A  M  Y  Y  C  A  R  G  F  R  K  T  S  S  
                    Query_6881   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGGCACGGCTATGTATTACTGTGCGAGAGGGTTTAGGAAAACTTCCAGTT  270
V  96.0% (239/249)  IGHV3-33*01  227  ..........................................A.......G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-2*03   1    -----------------------------------------------------------------------------------------.  1

                                      T------------------>                                  
                                      W  M  D  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6881   271  GGATGGATGCCTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
D  100.0% (5/5)     IGHD2-2*03   2    ....--------------------------------------------------  5
J  98.0% (48/49)    IGHJ3*01     2    -----.....T...........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_219751

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           349     2e-98
IGHD1-26*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGAGCTA	TGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGGGAGCTATGGTTTGACTAC	TRGELWFDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_6882   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGCTTCACCTTCACTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-11*01  47   ...............................A..........G...............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  R  T  G  A  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6882   91   AGTGGGTCTCATACATTAGTCGTACTGGTGCCACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  94.8% (236/249)  IGHV3-11*01  137  .......T............A...G....AGT..........................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  R  A  V  Y  Y  C  T  R  G  E  L  W  F  D  Y  
                    Query_6882   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGGGCCGAGGACAGGGCCGTTTATTATTGTACGAGAGGGGAGCTATGGTTTGACTACT  270
V  94.8% (236/249)  IGHV3-11*01  227  ..................................A..........C......G.....C...G......---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-26*01  9    ---------------------------------------------------------------------........-------------  16
J  100.0% (43/43)   IGHJ4*02     6    --------------------------------------------------------------------------------..........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6882   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (43/43)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_219750

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           377     9e-107
IGHD2-2*01                                                                                            18.0    0.60  
IGHJ6*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAC	TCACGATTGGAA	TACCAGGTGCTA	AGGGGGACGGCG	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGACTCACGATTGGAATACCAGGTGCTAAGGGGGACGGCGTGGACGTC	ARLTIGIPGAKGDGVDV	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	255	7	6	1	0	85.7
Total	N/A	N/A	255	248	7	0	97.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_6883   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  97.3% (248/255)  IGHV3-73*01  47   .........A................................................................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  S  K  T  N  N  Y  A  T  A  Y  A  A  S  V  R  G  R  F  T  I  S  R  D  
                    Query_6883   91   AGTGGGTTGGCCGTATTAGAAGCAAAACTAACAATTACGCGACAGCATATGCTGCGTCGGTGAGAGGCAGGTTCACCATCTCCAGAGATG  180
V  97.3% (248/255)  IGHV3-73*01  137  ..........................G......G.............................A..........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  K  N  T  A  F  L  Q  M  N  S  L  I  T  E  D  T  A  V  Y  Y  C  A  R  L  T  I  G  I  
                    Query_6883   181  ATTCAAAGAACACGGCGTTTCTGCAAATGAACAGCCTGATAACCGAGGACACGGCCGTGTATTACTGTGCTAGACTCACGATTGGAATAC  270
V  97.3% (248/255)  IGHV3-73*01  227  ..................A....................A............................A......---------------  301
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  91.7% (11/12)    IGHD2-2*01   16   ---------------------------------------------------------------------------------------...  18

                                      DR3-IMGT-------------------->                                 
                                      P  G  A  K  G  D  G  V  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_6883   271  CAGGTGCTAAGGGGGACGGCGTGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  332
D  91.7% (11/12)    IGHD2-2*01   19   ...C.....-----------------------------------------------------  27
J  97.6% (40/41)    IGHJ6*02     22   ---------------------..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_86145

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     2e-95
IGHD3-10*01                                                                                           10.3    118  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_6884   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-21*01  47   ............................................AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  E  Y  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_6884   91   AGTGGGTCTCATCCATTAGTAGTACTAGTGAATACATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  93.6% (233/249)  IGHV3-21*01  137  ........................G....AGT........C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_6884   181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTT  270
V  93.6% (233/249)  IGHV3-21*01  227  ............A......A..............................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6884   271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_128840

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           355     3e-100
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GGG	AGTGGCTGGT	TCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGAGGGGAGTGGCTGGTTCCCTTTGAGCAC	GGGEWLVPFEH	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	64	5	0	92.8
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	5	2	0	71.4
Total	N/A	N/A	289	258	31	0	89.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  R  F  T  S  L 
                    Query_6885   2    CAGCTGGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTAAAACCTCTGGTTATAGATTTACCAGCCTT  91
V  89.3% (258/289)  IGHV1-18*01  7    .......................G...................................C..GG.T........C.CC.........TA.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  T  T  Y  N  D  D  T  K  Y  P  Q 
                    Query_6885   92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGCTGGGCTGGATCACCACTTACAATGATGACACGAAGTATCCACAG  181
V  89.3% (258/289)  IGHV1-18*01  97   ........C..........................G.........A....A.......G.G.........G.A....A..C...G.....  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  L  T  L  T  T  D  R  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_6885   182  AAGTTTCAGGGCAGACTCACGTTGACCACAGACAGATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTCAGATCTGACGACACGGCC  271
V  89.3% (258/289)  IGHV1-18*01  187  ...C.C.........G....CA............C....................................G..................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  G  G  G  E  W  L  V  P  F  E  H  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_6885   272  GTATATTACTGTGGGGGAGGGGAGTGGCTGGTTCCCTTTGAGCACTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  350
V  89.3% (258/289)  IGHV1-18*01  277  ..G..........C.A...------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                              
D  100.0% (10/10)   IGHD6-19*01  10   ----------------------..........-----------------------------------------------  19
J  93.2% (41/44)    IGHJ4*02     5    -----------------------------------......CT....................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_128841

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           350     8e-99
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	C	GGGACTTATGC	CAACTCGCCA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGACTTATGCCAACTCGCCATACTGGTACTTCGATCTC	ASGTYANSPYWYFDL	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_6886   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCGGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.2% (236/248)  IGHV4-39*02  49   ...................C...........G.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  T  G  S  A  Y  H  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_6886   91   CTGGAGTGGATTGCGAGTATCTATTATACTGGGAGCGCCTACCACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  95.2% (236/248)  IGHV4-39*02  139  .............G..............G.......A.....T...............................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       N  N  H  F  S  L  Q  L  S  S  V  T  D  A  D  T  A  V  Y  Y  C  A  S  G  T  Y  A  N  S  P 
                    Query_6886   181  AACAACCACTTCTCCCTGCAGCTGAGCTCTGTGACCGACGCAGACACGGCTGTCTATTACTGTGCGAGCGGGACTTATGCCAACTCGCCA  270
V  95.2% (236/248)  IGHV4-39*02  229  ..G...............A..................C...............G..............----------------------  296
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.9% (10/11)    IGHD3-16*01  20   ---------------------------------------------------------------------....G......----------  30

                                      ----------------->                                  
                                       Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6886   271  TACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  322
J  100.0% (52/52)   IGHJ2*01     2    ....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_219758

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6887   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6887   91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_6887   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  95.5% (231/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  95.7% (45/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_6887   271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  313
J  95.7% (45/47)    IGHJ5*02     9    T......................................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_206216

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           399     3e-113
IGHD3-16*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	TGGGGGA	TGGCGACAATTCTGACATTTCG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTC	TRVGDGDNSDISYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  N  F  N  S  N
                    Query_6888   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGTTCTGGATACAACTTTAACAGTAA  90
V  94.1% (272/289)  IGHV5-51*03  6    ..................................................A..........................G.....C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_6888   91   CTGGATCGGATGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACCAGATATAGGCC  180
V  94.1% (272/289)  IGHV5-51*03  96   .........C..................................................T.......................C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  T  A  D  K  S  T  T  T  A  Y  L  R  W  S  S  L  K  A  S  D  T  A
                    Query_6888   181  GTCCTTCCAAGGCCACGTCACCATTACAGCCGACAAGTCCACCACCACCGCCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.1% (272/289)  IGHV5-51*03  186  ...............G........CT...............T..G..............A..............................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  T  R  V  G  D  G  D  N  S  D  I  S  Y  G  M  D  V  W  G  Q  G  T  K  V  T  V
                    Query_6888   271  CATCTATTACTGTACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTCTGGGGCCAAGGGACCAAGGTCACCGT  360
V  94.1% (272/289)  IGHV5-51*03  276  ...G.........G.....-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-16*01  17   --------------------.......---------------------------------------------------------------  23
J  95.8% (46/48)    IGHJ6*02     15   -------------------------------------------------.....T.........................C.........  55

                                             
                                        S  S 
                    Query_6888   361  CTCCTCA  367
J  95.8% (46/48)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_211503

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            378     3e-107
IGHD1-1*01                                                                                            18.0    0.62  
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD1-1*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GTAATCAG	TGGAACGAC	TGGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCACAGACGTAATCAGTGGAACGACTGGGATGATGCTTTTGATATC	AHRRNQWNDWDDAFDI	263	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	45	1	0	97.8
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	108	6	0	94.7
CDR3-IMGT (germline)	263	272	10	9	1	0	90
Total	N/A	N/A	272	257	15	0	94.5


Alignments

                                     <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                       L  V  K  P  T  Q  T  L  T  L  A  C  T  F  S  G  F  S  L  S  T  G  G  V  G  V  G  W  I  R
                    Query_6889  1    GCTGGTGAAACCCACACAGACCCTCACGCTGGCCTGCACCTTCTCTGGGTTTTCACTCAGCACTGGTGGAGTGGGTGTGGGCTGGATCCG  90
V  94.5% (257/272)  IGHV2-5*01  30   ...............................A...................C............A.........................  119
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                     -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                       Q  P  P  G  K  A  L  E  W  L  A  S  I  Y  W  T  A  D  K  R  Y  N  P  S  L  Q  S  R  V  T
                    Query_6889  91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCGTCCATTTATTGGACTGCTGATAAGCGCTACAACCCATCTCTGCAGAGCAGGGTCAC  180
V  94.5% (257/272)  IGHV2-5*01  120  .................................ACT...........A..A..............G..........A........C....  209
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                     ---------------------FR3-IMGT----------------------------------------------------><-------
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  L  D  T  A  T  Y  Y  C  A  H  R
                    Query_6889  181  CATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTCTTGACACAGCCACATATTATTGTGCGCACAG  270
V  94.5% (257/272)  IGHV2-5*01  210  ..........................................................G.G.................C.....A.....  299
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  R

                                     ------------CDR3-IMGT------------------>                                  
                                       R  N  Q  W  N  D  W  D  D  A  F  D  I  W  G  Q  G  A  V  V  T  V  S  S  
                    Query_6889  271  ACGTAATCAGTGGAACGACTGGGATGATGCTTTTGATATCTGGGGCCAAGGGGCAGTAGTCACCGTCTCTTCAG  344
V  94.5% (257/272)  IGHV2-5*01  300  ..------------------------------------------------------------------------  301
                                                                                                               
D  100.0% (9/9)     IGHD1-1*01  9    ----------.........-------------------------------------------------------  17
J  94.0% (47/50)    IGHJ3*02    1    ------------------------............................A..A.G................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_211500

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTCTGTG	AGCAGTGCCTGGT	CGTTTGGTCCCCCCCCACGACTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCTGTGAGCAGTGCCTGGTCGTTTGGTCCCCCCCCACGACTCTACTACCTCGACTGC	ARHSVSSAWSFGPPPRLYYLDC	252	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	137	27	21	0	6	77.8
FR3-IMGT	138	251	114	107	7	0	93.9
CDR3-IMGT (germline)	252	259	8	8	0	0	100
Total	N/A	N/A	256	237	13	6	92.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  S  S  Y  H  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_6890   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGCAGTTACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  92.6% (237/256)  IGHV4-39*01  50   .....TCC...A..................................T......T....................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><--------CDR2-IMGT--------><---------------------------------------------
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  N  T  N  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  
                    Query_6890   94   TGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCAACACCAACTACAACCCGTCCCTCGAGAGTCGAGTAACCATGTCCGTAGACA  183
V  92.6% (237/256)  IGHV4-39*01  140  ..................................------....T.................A..........C.....A..........  223
                                      L  E  W  I  G  S  I  Y  Y  S  G  S        T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  T  Y  Y  C  A  R  H  S  V  S  S  
                    Query_6890   184  CGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGAGCGCCGCAGACACGGCTACGTATTACTGTGCGAGACATTCTGTGAGCAGTG  273
V  92.6% (237/256)  IGHV4-39*01  224  .......................................C................GT..................--------------  299
                                      T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                 
D  92.3% (12/13)    IGHD6-19*01  7    -----------------------------------------------------------------------------------.......  13

                                      -------CDR3-IMGT--------------------------->                                  
                                      A  W  S  F  G  P  P  P  R  L  Y  Y  L  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6890   274  CCTGGTCGTTTGGTCCCCCCCCACGACTCTACTACCTCGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  351
D  92.3% (12/13)    IGHD6-19*01  14   G.....------------------------------------------------------------------------  19
J  93.8% (45/48)    IGHJ4*02     1    ------------------------------.....T.T....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_206215

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           355     3e-100
IGHD6-19*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAACT	CAGTGGCTGG	ATTCGGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACTCAGTGGCTGGATTCGGGGTACTTTGACTAC	ARGTQWLDSGYFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6891   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAGCTATGGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-21*01  47   ...........................................T......A.......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  T  S  S  Y  I  Y  Y  A  D  S  L  E  G  R  F  T  I  S  R  D  N  A  
                    Query_6891   91   AGTGGGTCTCATATATTAGTAGTACTAGTAGTTACATATACTACGCAGACTCACTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (238/249)  IGHV3-21*01  137  ............CC..........G............................G..A.................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  P  L  D  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  T  Q  W  L  D  S  
                    Query_6891   181  AGAACCCACTGGATCTGCAAATGAACGGCCTGCGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGAACTCAGTGGCTGGATTCGG  270
V  95.6% (238/249)  IGHV3-21*01  227  .....T.....T..............A.....A....................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD6-19*01  9    --------------------------------------------------------------------------..........------  18

                                      ------------->                                  
                                      G  Y  F  D  Y  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_6891   271  GGTACTTTGACTACTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  318
J  97.8% (45/46)    IGHJ4*02     3    --............................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_206212

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            341     6e-96
IGHD3-16*01                                                                                           14.1    9.9  
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	TGGGGGA	CGTCCCCCCTCCTCGTGCGAAATGGGTCCAGTCATGGAGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGTGGGGGACGTCCCCCCTCCTCGTGCGAAATGGGTCCAGTCATGGAGGTGGTTCAACCCC	VRVGDVPPPRAKWVQSWRWFNP	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	254	36	0	87.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  E  P  G  A  S  V  T  V  S  C  K  A  S  E  Y  S  F  L  V  Y
                    Query_6892   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGGAGCCTGGGGCCTCAGTGACGGTCTCCTGCAAGGCCTCTGAGTACAGCTTCCTCGTTTA  90
V  87.6% (254/290)  IGHV1-8*01   6    ..................G..........A.A..................A...............T....GA....C....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  T  P  R  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_6892   91   TGATATCAACTGGGTGCGACAAACCCCTAGACAGGGGCTTGAGTGGATGGGGTGGATGAACCCCAACAGCGGAAATACAGGCTATGCACA  180
V  87.6% (254/290)  IGHV1-8*01   96   .....................GG..A..G....A.................A...........T.....T..T..C..............  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  S  A  I  N  T  A  Y  M  H  L  I  S  L  T  S  E  D  T  A
                    Query_6892   181  GAAGTTTCAGGGCAGAGTCACCATGACCAGGGACAGCGCCATAAACACAGCCTATATGCACCTGATAAGCCTGACATCTGAGGACACGGC  270
V  87.6% (254/290)  IGHV1-8*01   186  ......C........................A...C.T......G.........C...G.G....GC.......G...............  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------------CDR3-IMGT--------------------------->           
                                        V  Y  Y  C  V  R  V  G  D  V  P  P  P  R  A  K  W  V  Q  S  W  R  W  F  N  P  W  G  Q  G
                    Query_6892   271  CGTCTATTATTGTGTGAGAGTGGGGGACGTCCCCCCTCCTCGTGCGAAATGGGTCCAGTCATGGAGGTGGTTCAACCCCTGGGGCCAGGG  360
V  87.6% (254/290)  IGHV1-8*01   276  ...G.....C....C.....----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-16*01  17   --------------------.......---------------------------------------------------------------  23
J  91.3% (42/46)    IGHJ5*02     6    -------------------------------------------------------------------......G................  28

                                                             
                                        T  R  V  T  V  S  S  
                    Query_6892   361  AACCCGAGTCACCGTCTCATCAG  383
J  91.3% (42/46)    IGHJ5*02     29   .....TG...........C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_206213

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            361     4e-102
IGHD1-1*01                                                                                            14.1    8.3   
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-1*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	CGACATGGC	TACAACT	T	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATCGACATGGCTACAACTTTGATGCTTTTGATATT	VKDRHGYNFDAFDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	251	9	7	2	0	77.8
Total	N/A	N/A	251	241	10	0	96


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  V  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6893  1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.0% (241/251)  IGHV3-9*01  47   ........................C.................................................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  V  S  W  N  S  D  N  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6893  91   AGTGGGTCTCAGGTGTTAGTTGGAACAGTGATAACATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (241/251)  IGHV3-9*01  137  ..............A..........T....G..G........................................................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                     N  N  S  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  D  R  H  G  Y  N  F  
                    Query_6893  181  ACAACTCCCTGCATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTATATTACTGTGTGAAAGATCGACATGGCTACAACTTTG  270
V  96.0% (241/251)  IGHV3-9*01  227  .G.........T........................................G..........CA......-------------------  297
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (7/7)     IGHD1-1*01  3    --------------------------------------------------------------------------------.......---  9
J  96.0% (48/50)    IGHJ3*02    1    ----------------------------------------------------------------------------------------..  2

                                     ------------->                                  
                                     D  A  F  D  I  W  G  Q  G  T  M  V  T  A  S  S  
                    Query_6893  271  ATGCTTTTGATATTTGGGGCCAAGGGACAATGGTCACCGCCTCTTCAG  318
J  96.0% (48/50)    IGHJ3*02    3    .............C.........................T........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_206210

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            343     2e-96
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAA	GGCAGGGCC	CGGTGACTAC	GGCGGGTCCA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGGCAGGGCCCGGTGACTACGGCGGGTCCAACTTTGACTGC	AKAGPGDYGGSNFDC	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  Y  D  Y  V  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6894   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTTATGATTATGTCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  94.3% (233/247)  IGHV3-9*01   47   .........................................G.........C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  Y  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6894   91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGGTTACATAGGATATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  94.3% (233/247)  IGHV3-9*01   137  ................................AG......C................................................A  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      G  N  S  L  Y  L  E  M  N  S  L  T  L  E  D  T  A  L  Y  Y  C  A  K  A  G  P  G  D  Y  G  
                    Query_6894   181  GGAACTCCCTGTATCTGGAAATGAACAGTCTGACGCTGGAAGACACGGCCTTGTATTACTGTGCAAAGGCAGGGCCCGGTGACTACGGCG  270
V  94.3% (233/247)  IGHV3-9*01   227  A................C...............GAGCT..G..........................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (10/10)   IGHD4-17*01  7    ----------------------------------------------------------------------------..........----  16

                                      ---------------->                                  
                                      G  S  N  F  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6894   271  GGTCCAACTTTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.8% (44/45)    IGHJ4*02     4    ------.........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_206211

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         294     6e-82
IGHD3-10*01                                                                                           14.1    8.5  
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CAAGGACACCAG	TATGGTT	GGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGACAAGGACACCAGTATGGTTGGGTGGTTCGACCCC	ARDKDTSMVGWFDP	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	18	8	0	69.2
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	253	8	7	1	0	87.5
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  V  V  S  G  D  S  I  S  S  G  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  A  
                    Query_6895     4    CCCTGAGACTCTCCTGTGTTGTGTCTGGTGACTCCATCAGCAGCGGTGGTTACTACTGGAGTTGGCTCCGCCAGCCCCCAGGGAAGGCCC  93
V  87.6% (219/250)  IGHV4-30-4*01  50   .....TCC...A....CAC...C.......G............T....A................A.....................G..  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        P  E  W  I  G  Y  F  Y  Y  G  G  N  T  Y  Y  N  P  S  L  E  S  R  T  S  I  S  V  D  A  S  
                    Query_6895     94   CGGAATGGATTGGGTACTTCTATTATGGTGGGAACACCTACTACAACCCGTCCCTCGAGAGTCGAACTTCCATATCAGTAGACGCGTCCA  183
V  87.6% (219/250)  IGHV4-30-4*01  140  T...G............A.......CA......G......................A........GT.A..............A......  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                        K  N  L  F  S  L  N  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  K  D  T  S  M  V  
                    Query_6895     184  AGAACCTGTTCTCCCTGAACTTGACCTCTGTGACTGCCGCAGACACGGCCGTCTATTACTGCGCCAGGGACAAGGACACCAGTATGGTTG  273
V  87.6% (219/250)  IGHV4-30-4*01  230  ......A............GC...G...........................G........T.....A..--------------------  299
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-10*01    8    ----------------------------------------------------------------------------------.......-  14

                                        ------------->                                  
                                        G  W  F  D  P  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_6895     274  GGTGGTTCGACCCCTGGGGCCAGGGAATCCTCGTCACCGTCTCCTCAG  321
J  95.7% (44/46)    IGHJ5*02       6    --.........................C...G................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_315386

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           325     3e-91
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCGG	TTACGATTTCTGGAGTGGTTATTTTAC	GGACGGGTAT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCGGTTACGATTTCTGGAGTGGTTATTTTACGGACGGGTATCTGGTTCGACCCC	ARDSVTISGVVILRTGIWFDP	232	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	11	0	0	100
CDR1-IMGT	19	42	24	23	1	0	95.8
FR2-IMGT	43	93	51	50	1	0	98
CDR2-IMGT	94	117	24	22	2	0	91.7
FR3-IMGT	118	231	114	106	8	0	93
CDR3-IMGT (germline)	232	239	8	8	0	0	100
Total	N/A	N/A	232	220	12	0	94.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  T  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  A  Y  I  
                    Query_6896   8    GTGCAGCCTCTGGATTCACCTTCACTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGCATACATTA  97
V  94.8% (220/232)  IGHV3-11*01  65   ........................G.......................................................T.........  154
                                         A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  S  G  R  T  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  K  N  S  V  Y  L  
                    Query_6896   98   GTAGTAGTGGTCGTACCAAATACTACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCCGGGACGACGCCAAGAACTCCGTGTATTTGC  187
V  94.8% (220/232)  IGHV3-11*01  155  ...........A......T...........................A............A.....A.............AC.....C...  244
                                      S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><--------------------------CDR3-IMGT----------
                                      Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R  D  S  V  T  I  S  G  V  V  I  L  R  T  
                    Query_6896   188  AAATGAACAGCCTGAGAGCCGGGGACACGGCCGTCTATTACTGTGCGAGAGATTCGGTTACGATTTCTGGAGTGGTTATTTTACGGACGG  277
V  94.8% (220/232)  IGHV3-11*01  245  .....................A............G.................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  92.6% (25/27)    IGHD3-3*01   4    ---------------------------------------------------------.........T.............A...------  30

                                      ---------------->                                  
                                      G  I  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6896   278  GTATCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
J  100.0% (47/47)   IGHJ5*02     5    ----...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_315385

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           276     3e-76
IGHD3-10*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAC	TGGAGGGGGCTTCGGGAGC	TTATTATAAC	GGACGGCGGGGACT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACTGGAGGGGGCTTCGGGAGCTTATTATAACGGACGGCGGGGACTTATGGACGTC	ARLEGASGAYYNGRRGLMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	12	9	0	57.1
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	213	37	0	85.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  F  S  T  S  D  Y  W  V  W  I  R  Q  T  P  G  K  G 
                    Query_6897   1    ACCCTGTCTCTCACCTGCACCGTCTCTGGCGGCTCCATCTTCAGTACTTCTGACTACTGGGTCTGGATCCGCCAGACCCCCGGGAAGGGG  90
V  85.2% (213/250)  IGHV4-39*01  49   ........C...........T........T.........AG.....G.AG.T.........G.............C....A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  A  V  H  H  T  R  R  T  Y  Y  N  P  S  L  K  S  R  S  T  M  S  V  D  I  S 
                    Query_6897   91   CTGGAGTGGATTGGGGCTGTTCATCACACTAGAAGAACCTACTACAACCCGTCCCTCAAAAGTCGATCCACCATGTCCGTAGACATATCT  180
V  85.2% (213/250)  IGHV4-39*01  139  ...............AG.A.CT..T.T.G.G.G..C.......................G......GT......A..........CG..C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       R  N  Q  F  S  L  T  L  R  S  V  T  A  A  D  T  S  V  Y  Y  C  A  R  L  E  G  A  S  G  A 
                    Query_6897   181  AGGAACCAGTTCTCCCTGACCCTGAGGTCTGTGACCGCCGCAGACACGTCTGTTTATTACTGTGCGCGACTGGAGGGGGCTTCGGGAGCT  270
V  85.2% (213/250)  IGHV4-39*01  229  .A.................AG.....C.....................G....G............A...--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (10/10)   IGHD3-10*01  22   -----------------------------------------------------------------------------------------.  22

                                      DR3-IMGT------------------------>                                 
                                       Y  Y  N  G  R  R  G  L  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_6897   271  TATTATAACGGACGGCGGGGACTTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTGTCCTCA  336
D  100.0% (10/10)   IGHD3-10*01  23   .........---------------------------------------------------------  31
J  95.3% (41/43)    IGHJ6*02     20   -----------------------................................C...C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_211509

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           327     1e-91
IGHD2-21*01                                                                                           25.7    0.003
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-21*01	IGHJ3*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCGCGCAAAC	TGTGGTGGTGAGTGCT	TCGCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGCGCAAACTGTGGTGGTGAGTGCTTCGCATTTGATGTC	RGAQTVVVSASHLMS	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	77	71	66	4	1	93
CDR1-IMGT	78	101	24	16	8	0	66.7
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	97	17	0	85.1
CDR3-IMGT (germline)	291	295	5	5	0	0	100
Total	N/A	N/A	289	251	37	1	86.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L   C  S  L  E  L  R  *  R  S  L  G  R  R  *  R  S  P  A  R  P  L  E  T  S  S  K  T 
                    Query_6898   8    TGCAGCTG-TGCAGTCTGGAGCTCAGGTGAAGAAGCCTGGGTCGTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGACATCTTCAAAAACA  96
V  86.9% (251/289)  IGHV1-69*06  5    ........G..........G...G...................C.......................T.......G..C.....GC.G.T  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                       L  L  S  T  G  C  D  R  P  P  D  R  G  L  S  G  W  E  G  S  A  L  S  L  A  Q  L  L  I  H 
                    Query_6898   97   CTGTTATCAACTGGGTGCGACAGGCCCCCGGACAGGGGCCTGAGTGGATGGGAGGGATCAGCCCTCTCTTTGGCACAGCTACTTATCCAC  186
V  86.9% (251/289)  IGHV1-69*06  95   A..C.....G..................T.....A....T....................T....A.......T.....A.AC..CG...  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                       R  S  F  R  T  E  S  S  L  P  R  T  N  P  R  A  Q  T  T  W  S  *  V  H  *  D  L  K  T  R 
                    Query_6898   187  AGAAGTTTCAGGACAGAGTCATCATTACCGCGGACAAATCCACGAGCACAGACTACTTGGAGCTGAGTACACTGAGATCTGAAGACACGG  276
V  86.9% (251/289)  IGHV1-69*06  185  .......C....G........CG............................C....A..........C.GC...........G.......  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-----------------CDR3-IMGT----------------->                               
                                       P  S  T  I  V  R  G  A  Q  T  V  V  V  S  A  S  H  L  M  S  G  A  K  G  Q  R  S  S  S  L 
                    Query_6898   277  CCGTCTACTATTGTGCGAGGCGCGCAAACTGTGGTGGTGAGTGCTTCGCATTTGATGTCTGGGGCCAAGGGACAACGGTCATCGTCACTT  366
V  86.9% (251/289)  IGHV1-69*06  275  ....G..T..C........-----------------------------------------------------------------------  293
                                      A  V  Y  Y  C  A                                                                          
D  93.8% (15/16)    IGHD2-21*01  8    -----------------------------...........T....---------------------------------------------  23
J  93.0% (40/43)    IGHJ3*01     8    --------------------------------------------------.........................T.....C....T...  47

                                         
                                       Q 
                    Query_6898   367  CAG  369
J  93.0% (40/43)    IGHJ3*01     48   ...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_315383

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           241     5e-66
IGHD2-8*01                                                                                            12.2    31   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	C	GTATGC	GACGGAGTGAAATCGGCTTAGGTGGGG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGTATGCGACGGAGTGAAATCGGCTTAGGTGGGGACTTCTTTGACCAC	ARMRRSEIGLGGDFFDH	233	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	46	30	21	9	0	70
FR2-IMGT	47	97	51	51	0	0	100
CDR2-IMGT	98	118	21	14	7	0	66.7
FR3-IMGT	119	232	114	96	18	0	84.2
CDR3-IMGT (germline)	233	235	3	3	0	0	100
Total	N/A	N/A	222	188	34	0	84.7


Alignments

                                      <F><----------CDR1-IMGT---------><--------------------FR2-IMGT---------------------><-----
                                       S  G  G  S  I  N  S  V  N  Y  L  W  S  W  I  R  Q  H  P  G  K  G  L  E  W  I  G  Y  A  Y 
                    Query_6899   14   TCTGGAGGCTCCATCAATAGTGTCAATTACCTCTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACGCCTAC  103
V  84.7% (188/222)  IGHV4-31*02  73   .....T..........GC....GTGG....TA....................................................AT...T  162
                                       S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  L  E  W  I  G  Y  I  Y 

                                      CDR2-IMGT-----><----------------------------------------------------FR3-IMGT--------------
                                       Y  S  G  S  D  R  Y  N  P  S  L  K  N  R  V  S  M  S  L  D  T  S  R  N  Q  F  S  L  K  V 
                    Query_6899   104  TACAGTGGGAGTGATCGGTACAACCCATCCCTCAAGAATCGAGTTTCCATGTCACTAGATACGTCGAGGAATCAGTTCTCCCTGAAGGTG  193
V  84.7% (188/222)  IGHV4-31*02  163  ...........CACCTAC........G..........G.......A....A...G....C.....T.A...C...............C..  252
                                       Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L 

                                      --------------------------------------><--------------------CDR3-IMGT-------------------->
                                       T  S  M  T  A  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  I  G  L  G  G  D  F  F  D  H 
                    Query_6899   194  ACCTCTATGACGGCCGCGGACACGGCCATCTATTACTGTGCGCGTATGCGACGGAGTGAAATCGGCTTAGGTGGGGACTTCTTTGACCAC  283
V  84.7% (188/222)  IGHV4-31*02  253  .G....G....T...............G.G............------------------------------------------------  294
                                       S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                                 
D  100.0% (6/6)     IGHD2-8*01   20   -------------------------------------------......-----------------------------------------  25
J  93.8% (45/48)    IGHJ4*02     1    ----------------------------------------------------------------------------...A.......T..  14

                                                                        
                                       W  G  Q  G  A  L  V  T  V  S  S  
                    Query_6899   284  TGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  317
J  93.8% (45/48)    IGHJ4*02     15   ............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_315382

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           363     1e-102
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATAG	GGGTG	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATAGGGGTGACTATTTTGACTAC	ARGLHYYDRGDYFDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	238	6	0	97.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6900   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.5% (238/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6900   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGGTAGACACGTCTAAGAAC  180
V  97.5% (238/244)  IGHV4-59*01  139  .......................................................................A...........C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R  G  D 
                    Query_6900   181  CAGTTCTCCCTGAATCTGCGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCTCCATTACTATGATAGGGGTGAC  270
V  97.5% (238/244)  IGHV4-59*01  229  ..............G...A..........C..T...............................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD3-22*01  3    ----------------------------------------------------------------------.............-------  15
J  93.8% (45/48)    IGHJ4*02     1    ----------------------------------------------------------------------------------------..  2

                                      ----------->                                  
                                       Y  F  D  Y  W  G  Q  G  I  L  V  P  V  S  S  
                    Query_6900   271  TATTTTGACTACTGGGGCCAGGGAATCCTGGTCCCCGTCTCCTCAG  316
J  93.8% (45/48)    IGHJ4*02     3    ..C......................C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_206218

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           339     2e-95
IGHD3-10*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGGAGGGGGCTTCGGGACAG	TATTATAAC	GGACGGCGGGGGAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGGAGGGGGCTTCGGGACAGTATTATAACGGACGGCGGGGGATTATGGACGTC	ARLEGASGQYYNGRRGIMDV	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	80	30	25	5	0	83.3
FR2-IMGT	81	131	51	48	3	0	94.1
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	104	10	0	91.2
CDR3-IMGT (germline)	267	271	5	5	0	0	100
Total	N/A	N/A	271	244	27	0	90


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  S  V  S  G  G  S  I  R  G  T  T  Y  Y  W  A  W  
                    Query_6901   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGTAGTGTCTCTGGTGGCTCCATCAGAGGGACTACTTACTACTGGGCCTGGA  90
V  90.0% (244/271)  IGHV4-39*01  26   ................T.......................C.C.....................CA.T.G..G...........G.....  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  T  V  R  Y  P  G  S  T  Y  Y  K  P  S  L  K  S  R  
                    Query_6901   91   TCCGCCAGCCCCCAGGGAAGGGGCTGGAATGGATTGGGACTGTTCGTTATCCTGGGAGCACCTATTACAAGCCGTCTCTCAAGAGTCGAC  180
V  90.0% (244/271)  IGHV4-39*01  116  ............................G..........G.A.CTA....AG............C.....C.....C............G  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      L  T  I  S  I  D  T  S  K  N  Q  F  S  L  N  L  G  S  V  T  A  A  D  T  S  V  Y  Y  C  A  
                    Query_6901   181  TCACCATTTCCATAGACACGTCCAAGAACCAGTTCTCCCTGAACCTGGGGTCTGTGACCGCCGCAGACACGTCTGTGTATTACTGTGCGA  270
V  90.0% (244/271)  IGHV4-39*01  206  .......A...G...............................G...A.C.....................G..................  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  L  E  G  A  S  G  Q  Y  Y  N  G  R  R  G  I  M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_6901   271  GGCTGGAGGGGGCTTCGGGACAGTATTATAACGGACGGCGGGGGATTATGGACGTCTGGGGCCAAGGGGCCACGGTCACCGTCTCCTCA  359
V  90.0% (244/271)  IGHV4-39*01  296  .----------------------------------------------------------------------------------------  296
                                                                                                                               
D  100.0% (9/9)     IGHD3-10*01  23   -----------------------.........---------------------------------------------------------  31
J  97.7% (42/43)    IGHJ6*02     20   ----------------------------------------------......................A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_315380

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD5-12*01                                                                                           14.1    8.7  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGGCATT	TGGCTATGAT	CTTGACGTAAGGGGAATCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGGCATTTGGCTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCAC	ARAPAFGYDLDVRGIHNFDH	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_6902   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAGT  93
V  94.7% (230/243)  IGHV4-59*01  50   .....TCC...A..............................G..............................A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  I  
                    Query_6902   94   GGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGATCC  183
V  94.7% (230/243)  IGHV4-59*01  140  .........A.................G.............................................A.............A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  A  F  G  Y  D  L  D  
                    Query_6902   184  AGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGGCATTTGGCTATGATCTTGACG  273
V  94.7% (230/243)  IGHV4-59*01  230  .................AG...........................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  90.0% (9/10)     IGHD5-12*01  11   -------------------------------------------------------------------------......C...-------  20

                                      T------------------------>                                  
                                      V  R  G  I  H  N  F  D  H  W  G  Q  G  T  Q  V  A  V  S  S  
                    Query_6902   274  TAAGGGGAATCCACAACTTTGACCACTGGGGCCAGGGAACCCAGGTCGCCGTCTCCTCAG  333
J  93.3% (42/45)    IGHJ4*02     4    ---------------........T..................T....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_172661

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	CGTGCAGGGGTCGTTA	TACGATTTTTGGAGTGG	GTTCCTGGGA	CCCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACGTGCAGGGGTCGTTATACGATTTTTGGAGTGGGTTCCTGGGACCC	ANVQGSLYDFWSGFLGP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	229	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         P  L  R  L  S  C  A  A  S  G  Y  T  F  R  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6903   1    GGCCCCTGAGACTCTCCTGTGCAGCCTCTGGATACACCTTTAGAAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (229/247)  IGHV3-23*01  47   ..T..............................T.........C..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  S  G  S  N  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6903   91   AGTGGGTCTCAGTTATTAGTGGTAGTGGAAGTAACATATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  92.7% (229/247)  IGHV3-23*01  137  ............C...............TG...G..C................................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  S  A  I  Y  Y  C  A  N  V  Q  G  S  L  Y  D  
                    Query_6903   181  GGAATACCCTGTATCTTCAAATGAATACCCTGAGAGCCGAGGACTCGGCCATATATTACTGTGCGAACGTGCAGGGGTCGTTATACGATT  270
V  92.7% (229/247)  IGHV3-23*01  227  A...C..G........G........C.G................A.....G................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (17/17)   IGHD3-3*01   5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                      F  W  S  G  F  L  G  P  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_6903   271  TTTGGAGTGGGTTCCTGGGACCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  327
D  100.0% (17/17)   IGHD3-3*01   12   ..........-----------------------------------------------  21
J  97.3% (36/37)    IGHJ5*02     15   --------------------................C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_172660

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHD2-15*01                                                                                           21.8    0.039
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AAAGTCT	GATATTGTAGT	CCC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGTCTGATATTGTAGTCCCTATGGACGTC	AKSDIVVPMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6904   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.0% (227/244)  IGHV3-21*01  47   .............................................G......C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  V  G  T  Y  I  E  Y  A  S  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_6904   91   AGTGGGTCTCGTACATTTCTAGTGTTGGTACTTATATAGAGTACGCAAGCTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  93.0% (227/244)  IGHV3-21*01  137  ..........A.C....AG....AG.A...G...C...T.C......GA......................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  S  D  I  V  V  P  M  
                    Query_6904   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGCAAAGTCTGATATTGTAGTCCCTATGG  270
V  93.0% (227/244)  IGHV3-21*01  227  .........................................................A......--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD2-15*01  3    -----------------------------------------------------------------------...........--------  13
J  100.0% (43/43)   IGHJ6*02     20   -------------------------------------------------------------------------------------.....  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6904   271  ACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  308
J  100.0% (43/43)   IGHJ6*02     25   ......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_172663

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           400     9e-114
IGHD3-22*01                                                                                           27.6    9e-04 
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	TC	ACTATGAGAGTAGTGATTTTTAC	ACACA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGTCACTATGAGAGTAGTGATTTTTACACACATGATGGTTTTAATATC	GSHYESSDFYTHDGFNI	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	288	272	16	0	94.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_6905   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGTGAGTCTCTGAGGATCTCCTGTAAGGCCTCTGGATACAGCTTCACCAGCTA  90
V  94.4% (272/288)  IGHV5-51*03  6    ..............................A........G..........A..............GT..............T........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  S  M  G  I  I  Y  P  S  D  S  D  T  T  Y  S  P
                    Query_6905   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTCCATGGGCATCATCTATCCCAGTGACTCCGATACCACATACAGCCC  180
V  94.4% (272/288)  IGHV5-51*03  96   ........G...................................GG.....G...........TG.......T.......G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  R  A  S  D  T  A
                    Query_6905   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACACCGC  270
V  94.4% (272/288)  IGHV5-51*03  186  ..........................................................................A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  G  S  H  Y  E  S  S  D  F  Y  T  H  D  G  F  N  I  W  G  Q  G  T  M  V  T  V
                    Query_6905   271  CATGTATTACTGTGGGAGTCACTATGAGAGTAGTGATTTTTACACACATGATGGTTTTAATATCTGGGGCCAAGGGACAATGGTCACCGT  360
V  94.4% (272/288)  IGHV5-51*03  276  ..............C...------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  87.0% (20/23)    IGHD3-22*01  6    --------------------.......T.......G..A....-----------------------------------------------  28
J  96.0% (48/50)    IGHJ3*02     1    ------------------------------------------------.....C....G...............................  42

                                              
                                        S  S  
                    Query_6905   361  CTCTTCAG  368
J  96.0% (48/50)    IGHJ3*02     43   ........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_172665

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           321     7e-90
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGCCGAAATC	GTATTACGACTTTTGGA	ATCCTTATTCTCGGCTCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCGAAATCGTATTACGACTTTTGGAATCCTTATTCTCGGCTCCTTCGACCCC	REGAEIVLRLLESLFSAPSTP	237	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	26	27	26	0	1	96.3
CDR1-IMGT	27	50	24	20	4	0	83.3
FR2-IMGT	51	101	51	47	4	0	92.2
CDR2-IMGT	102	122	21	20	1	0	95.2
FR3-IMGT	123	236	114	106	8	0	93
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	245	227	17	1	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T   A  L  S  M  V  G  P  S  V  I  I  I  G  A  G  S  A  S  L  Q  G  R  G  W  N
                    Query_6906   1    ACCCTGTCCCTCAC-TGCGCTGTCTATGGTGGGTCCTTCAGTGATCATTATTGGAGCTGGATCCGCCAGTCTCCAGGGAAGGGGCTGGAA  89
V  92.7% (227/245)  IGHV4-34*01  49   ..............C............................G.T.C..C..................C.C.................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                        G  L  G  R  S  T  I  V  E  A  P  T  T  T  R  L  S  R  V  E  S  P  Y  Q  R  T  R  L  R  T
                    Query_6906   90   TGGATTGGGGAGATCAACCATAGTGGAAGCACCAACTACAACCCGTCTCTCAAGAGTCGAGTCACCATATCAGCGGACACGTCTAAGAAC  179
V  92.7% (227/245)  IGHV4-34*01  139  ...........A.....T.............................C.........................TA........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                        S  S  P  *  S  *  S  L  *  P  P  Q  T  R  L  Y  I  S  V  R  E  G  A  E  I  V  L  R  L  L
                    Query_6906   180  CAGTTCTCCCTGAAGCTGATCTCTGTGACCGCCGCAGACACGGCTGTATATTTCTGTGCGAGAGGGGGCCGAAATCGTATTACGACTTTT  269
V  92.7% (227/245)  IGHV4-34*01  229  ...................G...............G...........G....A............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  94.1% (16/17)    IGHD3-3*01   1    ----------------------------------------------------------------------------.........T....  14

                                      MGT-------------------------->                                  
                                        E  S  L  F  S  A  P  S  T  P  G  A  R  E  P  R  S  P  S  P  Q 
                    Query_6906   270  GGAATCCTTATTCTCGGCTCCTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  333
D  94.1% (16/17)    IGHD3-3*01   15   ...-------------------------------------------------------------  17
J  97.7% (42/43)    IGHJ5*02     9    ---------------------.........................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_172666

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_6907   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_6907   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_6907   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_6907   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_172669

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD4-17*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCGGGGAGAGATT	CTACGGTGACT	CGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCGGGGAGAGATTCTACGGTGACTCGGTTGACTAC	AKVGERFYGDSVDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  F  S  D  Y  D  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6908   1    GGTCCCTGAGACTCTCCTGTACAGCCTCAGGATTCATCTTTAGCGATTATGACCTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-23*01  47   ....................G.......T.......C.......AGC....C.A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  N  D  V  G  D  R  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  S  
                    Query_6908   91   AGTGGGTCTCAACTATTAATGATGTTGGTGATAGGACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACACTTCCA  180
V  92.4% (230/249)  IGHV3-23*01  137  ...........G......G..G.AG.....G...C.................................................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  K  A  E  D  T  A  V  Y  Y  C  A  K  V  G  E  R  F  Y  G  
                    Query_6908   181  AGAACACACTGTATCTGCAAATGAACAGCCTGAAAGCCGAGGACACGGCCGTATATTATTGTGCGAAAGTCGGGGAGAGATTCTACGGTG  270
V  92.4% (230/249)  IGHV3-23*01  227  .......G.........................G........................C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD4-17*01  4    ----------------------------------------------------------------------------------........  11

                                      ------------->                                  
                                      D  S  V  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_6908   271  ACTCGGTTGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  318
D  100.0% (11/11)   IGHD4-17*01  12   ...---------------------------------------------  14
J  97.6% (41/42)    IGHJ4*02     7    ------..............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_172668

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           350     8e-99
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCT	GTGGCTGG	AAAAGCAGTCCG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTGTGGCTGGAAAAGCAGTCCGTGATGCTTTTGATATC	ARSVAGKAVRDAFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6909   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-30*04  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  H  K  Y  Y  A  D  S  V  K  G  R  L  T  V  S  R  D  N  S  
                    Query_6909   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTCATAAATACTATGCAGACTCCGTGAAGGGCCGACTCACCGTCTCCAGAGACAATTCCG  180
V  95.2% (236/248)  IGHV3-30*04  137  ................................A..........C.....................T.....A.................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  T  L  Y  V  Q  V  N  S  L  R  P  E  D  T  A  M  Y  Y  C  A  R  S  V  A  G  K  A  V  
                    Query_6909   181  AGAACACGCTCTATGTGCAAGTGAACAGCCTGAGACCTGAGGACACGGCTATGTATTACTGTGCGAGATCTGTGGCTGGAAAAGCAGTCC  270
V  95.2% (236/248)  IGHV3-30*04  227  ..........G...C.....A..............G..............G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18

                                      ---------------->                                
                                      R  D  A  F  D  I  W  G  R  G  T  V  V  I  V  S  S
                    Query_6909   271  GTGATGCTTTTGATATCTGGGGCCGAGGGACAGTGGTCATCGTGTCTTC  319
J  91.7% (44/48)    IGHJ3*02     1    -.......................A.......A......C...C.....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_337706

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           396     2e-112
IGHD7-27*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGTCCTTTTA	CTAACTGGGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGTCCTTTTACTAACTGGGGTTGACTTT	AVLLLTGVDF	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	269	16	0	94.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  N  Y
                    Query_6910   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACAGCTTTACCAACTA  90
V  94.4% (269/285)  IGHV5-51*03  6    .............................................................A........................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  G  W  V  R  Q  R  P  G  E  G  L  E  W  M  G  L  T  Y  P  G  D  S  D  T  R  Y  N  S
                    Query_6910   91   CTTCATCGGCTGGGTGCGCCAGAGGCCCGGGGAAGGCCTGGAGTGGATGGGGCTCACTTATCCTGGTGACTCTGATACCAGGTACAACTC  180
V  94.4% (269/285)  IGHV5-51*03  96   ..GG...................T.......A....................A...TC.......................A....G.C.  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6910   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.4% (269/285)  IGHV5-51*03  186  ...............G............................G..........C..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        I  Y  Y  C  A  V  L  L  L  T  G  V  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6910   271  CATTTATTACTGTGCAGTCCTTTTACTAACTGGGGTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  347
V  94.4% (269/285)  IGHV5-51*03  276  ...G...........--------------------------------------------------------------  290
                                        M  Y  Y  C  A                                                              
D  100.0% (10/10)   IGHD7-27*01  1    -------------------------..........------------------------------------------  10
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_24597

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD5-12*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CATCC	GTGGATATGGTG	CTCCTGGGACGCAAGTTGT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACATCCGTGGATATGGTGCTCCTGGGACGCAAGTTGTCTACGGAATGGCCGTC	ARDIRGYGAPGTQVVYGMAV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  A  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6911   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCACTAGTGCTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   .............................T..........GC....G...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  Q  S  R  I  T  I  S  Q  D  K  S 
                    Query_6911   91   CTGGAGTGGATTGGATACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCCAGAGTCGAATTACCATATCACAAGACAAGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ..............G..........................................A........G...........GT.....C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  I  R  G  Y  G  A 
                    Query_6911   181  AAGAACCAGTTCTCCCTGAACCTGAGCTCTGTGACGGCCGCGGACACGGCCGTATATTACTGTGCGAGGGACATCCGTGGATATGGTGCT  270
V  94.4% (237/251)  IGHV4-31*03  229  ....................G..............T.................G..............A..-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD5-12*01  1    ----------------------------------------------------------------------------........A...--  12

                                      DR3-IMGT------------------------>                                 
                                       P  G  T  Q  V  V  Y  G  M  A  V  W  G  H  G  T  R  V  T  V  S  S 
                    Query_6911   271  CCTGGGACGCAAGTTGTCTACGGAATGGCCGTCTGGGGCCACGGGACCAGGGTCACCGTCTCCTCA  336
J  91.8% (45/49)    IGHJ6*02     14   -----------------......T....A............A.......C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_24594

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           290     2e-80
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCGCCGGGTG	AGCAATGGCTGG	GGAACGTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGCCGGGTGAGCAATGGCTGGGGAACGTACTATAATTACGGGATGGACGCC	ARGRRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	220	25	6	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_6912   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  87.6% (220/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  P  V  D  T  S 
                    Query_6912   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCCCAGTAGACACGTCC  180
V  87.6% (220/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................AT..............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  V  S  N  G 
                    Query_6912   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCTGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCGCCGGGTGAGCAATGGC  270
V  87.6% (220/251)  IGHV4-34*01  223  ....................GC............C...C....................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_6912   271  TGGGGAACGTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_24595

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           361     5e-102
IGHD3-10*01                                                                                           14.1    9.4   
IGHJ2*01                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGCC	ACTATGG	GGATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATC	ARSHYGDAYWYLDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	95	19	0	83.3
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	259	28	0	90.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T  S  Y 
                    Query_6913   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATCTTCACCAGTTAT  91
V  90.2% (259/287)  IGHV1-18*01  7    .................................................................T..........C...T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  F  E  W  M  G  W  I  S  P  Y  N  G  N  T  A  Y  A  E 
                    Query_6913   92   GGAATCACTTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAGCCTACGCAGAG  181
V  90.2% (259/287)  IGHV1-18*01  97   ..T....GC...........................C.......................G.................AA...T...C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  F  T  V  A  T  E  T  S  T  N  T  A  F  M  E  L  R  S  L  K  A  D  A  P  A 
                    Query_6913   182  AAGTTCCAGGGCAGATTCACCGTGGCCACAGAGACTTCCACGAACACAGCCTTCATGGAGCTGCGGAGTCTGAAAGCTGACGCCCCGGCC  271
V  90.2% (259/287)  IGHV1-18*01  187  ...C...........G.....A..A.......C..A.......G........A..........A....C....G.T......A.A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  S  H  Y  G  D  A  Y  W  Y  L  D  I  W  G  R  G  A  L  V  T  V  S  S  
                    Query_6913   272  GTCTATTACTGTGCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATCTGGGGCCGTGGCGCCCTGGTCACTGTCTCCTCAG  359
V  90.2% (259/287)  IGHV1-18*01  277  ..G..............-----------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                          
D  100.0% (7/7)     IGHD3-10*01  6    ----------------------.......-----------------------------------------------------------  12
J  94.3% (50/53)    IGHJ2*01     1    -----------------------------------..........T.....C..............A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_295609

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           305     3e-85
IGHD3-22*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              48.8    7e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	ACTATGGCAGTAGTTGTT	TCGGTTTG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCACTATGGCAGTAGTTGTTTCGGTTTGGACTCC	ARDHYGSSCFGLDS	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	223	28	0	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  R  G  S  G  Q  Y  W  T  W  V  R  Q  P  P  G  K  G 
                    Query_6914   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTAAGGGGTAGTGGTCAGTACTGGACCTGGGTCCGCCAGCCCCCAGGGAAGGGC  90
V  88.8% (223/251)  IGHV4-31*03  49   ....................................A.C..CA..G.....T.C.......G....A.........A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  T  G  I  T  Y  Y  N  P  S  L  K  S  R  L  V  I  S  V  D  T  S 
                    Query_6914   91   CTGGAATGGATTGGTTACATCTATTACACTGGGATCACCTACTACAACCCGTCCCTCAAGAGTCGACTTGTCATCTCAGTCGACACTTCT  180
V  88.8% (223/251)  IGHV4-31*03  139  .....G........G.............G.....G...............................G..AC...A.....A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       N  N  Q  F  F  V  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  H  Y  G  S  S  C 
                    Query_6914   181  AACAACCAGTTTTTTGTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCATTTATTACTGTGCGAGAGATCACTATGGCAGTAGTTGT  270
V  88.8% (223/251)  IGHV4-31*03  229  ..G........C.CCC...A...............................G.G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  83.3% (15/18)    IGHD3-22*01  6    -------------------------------------------------------------------------......AT......G..  22

                                      -------------->                                  
                                       F  G  L  D  S  W  G  Q  G  K  L  V  T  V  S  S  
                    Query_6914   271  TTCGGTTTGGACTCCTGGGGCCAGGGAAAGCTGGTAACCGTCTCGTCAG  319
D  83.3% (15/18)    IGHD3-22*01  23   .------------------------------------------------  23
J  87.5% (35/40)    IGHJ4*02     9    ---------....A..............CC.....C........C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_74076

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTATTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  N  H  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6915   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTAATCACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (222/245)  IGHV4-59*01  49   .......................................AG..G.T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  S  H  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  T  A  D  K  S  K  N 
                    Query_6915   91   TGGATTGCCTATATCTCTCACAGTGGGGGCACCAATTACAACCGCTCCCTCAAGAGTCGAGTCACCATAACAGCGGACAAGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  .......GG.......A.T........A.......C.......C.........................T...TA....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_6915   181  CAGTTTTCCCTGAAGGTGAGATCTGTGACCGCCGCGGACACGGCCGTATATTATTGTGCCAGAGAGGCCTACTCTTATTACGGTATGGAC  270
V  90.6% (222/245)  IGHV4-59*01  229  .....C.........C....C...........T..............G.....C.....G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  91.4% (53/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC..C............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_6915   271  GTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  306
J  91.4% (53/58)    IGHJ6*02     27   ...........A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_24590

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*14                                                                                           335     4e-94
IGHD3-22*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*14	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	AGTGGTT	CTATCTTAATTCTTACACC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAGTGGTTCTATCTTAATTCTTACACCCTTTGACCAC	ARDSGSILILTPFDH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  L  R  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6916   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCCTCAGAAGTTACGCAATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  92.8% (232/250)  IGHV3-30*14  47   ...................................A..T....T..C..T..T................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  H  E  G  I  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6916   91   AATGGGTGGCAGTTATTTCACATGAGGGAATCAATAAATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-30*14  137  .G..............A...T....T....GT................................A.........................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  F  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A  R  D  S  G  S  I  L  I  
                    Query_6916   181  AGAACACACTGTTTCTTCAAATGAACAGCCTGAGAACTGAGGACACGGCTCTGTATTACTGTGCGAGAGACAGTGGTTCTATCTTAATTC  270
V  92.8% (232/250)  IGHV3-30*14  227  .......G....A......................G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-22*01  17   -----------------------------------------------------------------------.......------------  23

                                      ---------------->                                  
                                      L  T  P  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6916   271  TTACACCCTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.7% (43/44)    IGHJ4*02     5    -------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_24591

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            329     3e-92
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GTTCA	TACTATGATAATAGTGGTTAT	G	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGTTCATACTATGATAATAGTGGTTATGACTTCTATTTCGGTATGGACGTC	AKGSYYDNSGYDFYFGMDV	239	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	49	2	0	96.1
CDR2-IMGT	101	124	24	22	2	0	91.7
FR3-IMGT	125	238	114	109	5	0	95.6
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	232	221	11	0	95.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  L  T  F  E  D  Y  A  M  H  W  V  R  K  A  T  G  K  G  L  E  W  V  S  G  I 
                    Query_6917   14   TGTGCAGCCTCTGGACTCACCTTTGAGGATTATGCCATGCACTGGGTCCGGAAAGCTACAGGGAAGGGCCTGGAGTGGGTCTCAGGTATT  103
V  95.3% (221/232)  IGHV3-9*01   64   ...............T..........T........................C.....C................................  153
                                       C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  W  N  S  G  N  L  G  Y  A  Y  S  V  K  G  R  F  T  I  S  R  D  S  A  K  N  S  L  Y  L 
                    Query_6917   104  AGTTGGAATAGTGGTAACTTAGGCTATGCGTACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAGCGCCAAGAACTCCCTGTATCTG  193
V  95.3% (221/232)  IGHV3-9*01   154  ................G.A...........G................A...................A......................  243
                                       S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-----------------------CDR3-IMGT------------
                                       Q  M  N  S  L  K  P  E  D  T  A  L  Y  Y  C  A  K  G  S  Y  Y  D  N  S  G  Y  D  F  Y  F 
                    Query_6917   194  CAAATGAACAGTCTGAAACCTGAGGACACGGCCTTGTATTACTGTGCAAAAGGTTCATACTATGATAATAGTGGTTATGACTTCTATTTC  283
V  95.3% (221/232)  IGHV3-9*01   244  ................G.G.................................--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                                        
D  95.2% (20/21)    IGHD3-22*01  5    ---------------------------------------------------------..........G..........------------  25
J  94.3% (50/53)    IGHJ6*02     7    -------------------------------------------------------------------------------...A...C.A.  17

                                      ----------->                              
                                       G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_6917   284  GGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  325
J  94.3% (50/53)    IGHJ6*02     18   ..........................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_295605

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCCACGGGCTC	AGCAGTGGC	GATGACTCTGTTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCCACGGGCTCAGCAGTGGCGATGACTCTGTTTATGACTAC	VVHGLSSGDDSVYDY	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	241	1	1	0	0	100
Total	N/A	N/A	241	218	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  R  V  S  G  G  S  I  S  D  S  H  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_6918   1    ACCCTGTCCCTCACCTGCCGTGTCTCTGGTGGCTCCATCAGCGACAGTCACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.5% (218/241)  IGHV4-4*02   49   ..................GC......................AGT...A.........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  F  H  S  G  S  A  K  Y  N  P  S  L  Q  S  R  L  T  M  S  L  D  K  S  R 
                    Query_6918   91   GAGTGGATTGGGGAAGTTTTTCACAGTGGGAGCGCCAAGTACAACCCGTCCCTTCAGAGTCGACTCACCATGTCACTAGACAAGTCTAGG  180
V  90.5% (218/241)  IGHV4-4*02   139  ...............A.C.A...T.........A....C..............CA........G.......A...G..........C.A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  K  L  Q  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  H  G  L  S  S  G  D  D 
                    Query_6918   181  AACCAGTTCTCCCTGAAGCTGCAGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGTGGTCCACGGGCTCAGCAGTGGCGATGAC  270
V  90.5% (218/241)  IGHV4-4*02   229  .....................AGC.....................................-----------------------------  289
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  100.0% (9/9)     IGHD6-19*01  7    ---------------------------------------------------------------------------.........------  15

                                      -------------->                                  
                                       S  V  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6918   271  TCTGTTTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (41/41)   IGHJ4*02     8    --------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_295607

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           353     9e-100
IGHD2-15*01                                                                                           12.2    31    
IGHJ1*01                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAACAGGGG	GGTGGT	N/A	TTCCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAACAGGGGGGTGGTTTCCACCAC	AKDKQGGGFHH	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  P  P  G  K  G  P  
                    Query_6919   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCCGG  90
V  95.2% (238/250)  IGHV3-30*18  47   .................................................T.....................G...............T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  L  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6919   91   AGTCGCTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (238/250)  IGHV3-30*18  137  ...G.G....................................................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  S  G  L  R  S  D  D  T  A  V  Y  Y  C  A  K  D  K  Q  G  G  G  F  
                    Query_6919   181  AGAACACGCTGTTTCTGCAAATGAGCGGCCTGAGAAGTGACGACACGGCTGTTTATTACTGTGCGAAAGATAAACAGGGGGGTGGTTTCC  270
V  95.2% (238/250)  IGHV3-30*18  227  ............A...........A.A........GC...G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-15*01  14   --------------------------------------------------------------------------------......----  19
J  95.3% (41/43)    IGHJ1*01     10   --------------------------------------------------------------------------------------....  13

                                      ---->                                  
                                      H  H  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_6919   271  ACCACTGGGGCCAGGGCACCCTGGTCATCGTCTCCTCAG  309
J  95.3% (41/43)    IGHJ1*01     14   .G.........................C...........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_295606

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           364     5e-103
IGHD1-26*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAC	ATAGTGGGAGCTA	GGGCCGACC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACATAGTGGGAGCTAGGGCCGACCTTGACTAC	ARHIVGARADLDY	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	245	239	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  T  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6920   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTACCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTAG  90
V  97.6% (239/245)  IGHV3-53*01  47   .............................................G..........................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_6920   91   AGTGGGTCTCAGTTATTTATAGTGGTGGTAACACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  97.6% (239/245)  IGHV3-53*01  137  ......................C.......G...........................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------CDR3-IMGT-------
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  H  I  V  G  A  R  A  D  
                    Query_6920   181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAGACACATAGTGGGAGCTAGGGCCGACC  270
V  97.6% (239/245)  IGHV3-53*01  227  ...............................................G.G...............-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (13/13)   IGHD1-26*01  4    --------------------------------------------------------------------.............---------  16

                                      ------->                                  
                                      L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6920   271  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (42/42)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_295601

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           369     2e-104
IGHD3-16*02                                                                                           27.6    8e-04 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGC	TTTGGGGGATTTATCGT	CATTAGTGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCTTTGGGGGATTTATCGTCATTAGTGGGCTTTGACTAC	ARALGDLSSLVGFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	262	26	0	91


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  N  F  S  N  Y
                    Query_6921   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAAATCTCCTGTAAGGTGTCGGGATACAACTTTAGTAATTA  90
V  91.0% (262/288)  IGHV5-51*03  6    ...................................................G.............GT..T.......G.....CC.GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  A  W  M  G  I  I  F  P  D  D  S  D  T  G  Y  S  P
                    Query_6921   91   CTGGATTGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGCTTGGATGGGGATCATCTTTCCTGATGACTCTGACACCGGATACAGTCC  180
V  91.0% (262/288)  IGHV5-51*03  96   ......C..................................AG................A.....G.........T...A.......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  P  V  T  M  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6921   181  GTCGTTCCAAGGCCCGGTCACCATGTCAGTCGACAAGTCCATTAGTACCGCCTACCTCCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  91.0% (262/288)  IGHV5-51*03  186  ...C..........A.........C....C............C..C...........G................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  A  R  A  L  G  D  L  S  S  L  V  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6921   271  CATATATTATTGTGCGAGGGCTTTGGGGGATTTATCGTCATTAGTGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  91.0% (262/288)  IGHV5-51*03  276  ...G.....C........------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  94.1% (16/17)    IGHD3-16*02  15   ---------------------.........G.......----------------------------------------------------  31
J  100.0% (44/44)   IGHJ4*02     5    ------------------------------------------------..........................................  46

                                        
                                        
                    Query_6921   361  AG  362
J  100.0% (44/44)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_295602

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           329     3e-92
IGHD3-10*01                                                                                           21.8    0.042
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CAGTTTCTGTCTTAGTT	TGGTCCGGGGAGTT	TGTGGTGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGTTTCTGTCTTAGTTTGGTCCGGGGAGTTTGTGGTGGTTTTGATATC	ARGSFCLSLVRGVCGGFDI	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  N  G  G  S  F  N  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_6922   4    CCCTGAGACTCTCCTGTGCCGTCAATGGTGGGTCCTTCAATGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGT  93
V  93.0% (227/244)  IGHV4-34*01  50   .....TCC...A....C..T...T...............G..G.......................................G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  Q  S  G  T  T  N  Y  K  P  S  L  K  S  R  V  T  T  S  V  D  T  S  K  N  
                    Query_6922   94   GGATTGGGGAAATCAATCAAAGTGGAACCACCAACTACAAGCCGTCCCTCAAGAGTCGAGTAACCACATCAGTGGACACGTCCAAGAACC  183
V  93.0% (227/244)  IGHV4-34*01  140  ...................T.......G............C....................C....T......A................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  F  C  L  S  L  V  R  
                    Query_6922   184  AGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCAGTTTCTGTCTTAGTTTGGTCCGGG  273
V  93.0% (227/244)  IGHV4-34*01  230  ..................G.............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  92.9% (13/14)    IGHD3-10*01  10   ---------------------------------------------------------------------------------....T....  18

                                      ---------------------->                               
                                      G  V  C  G  G  F  D  I  W  G  Q  G  T  M  V  T  V  S  
                    Query_6922   274  GAGTTTGTGGTGGTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTT  327
D  92.9% (13/14)    IGHD3-10*01  19   .....-------------------------------------------------  23
J  100.0% (41/41)   IGHJ3*02     7    -------------.........................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_158733

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6923   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6923   91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_6923   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  95.5% (231/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6923   271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_158732

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           403     1e-114
IGHD6-6*01                                                                                            18.0    0.66  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGAC	TATAGCAGGTCG	ATTGGATGTTTTTGATGT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACTATAGCAGGTCGATTGGATGTTTTTGATGTC	AKTIAGRLDVFDV	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	71	4	0	94.7
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	106	8	0	93
CDR3-IMGT (germline)	292	295	4	4	0	0	100
Total	N/A	N/A	292	275	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  T  K  P  G  S  S  V  K  V  S  C  K  T  S  G  G  T  F  S 
                    Query_6924   4    CAGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGACGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACTTCTGGCGGCACCTTCAGC  93
V  94.2% (275/292)  IGHV1-69*12  1    ..............G........G..........A..................................G.......A............  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  A  I  S  W  V  R  Q  G  P  G  Q  G  L  E  W  M  G  G  I  I  P  T  F  G  S  A  N  Y 
                    Query_6924   94   AGCTATGCTATCAGCTGGGTGCGACAGGGCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCAACCTTTGGTTCAGCAAACTAC  183
V  94.2% (275/292)  IGHV1-69*12  91   ............................C.......................................T.T.......A...........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  F  R  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  D  L  R  S  L  R  S  D  D 
                    Query_6924   184  GCACAGAACTTCCGGGGCAGAGTCACAATTACCGCGGACGAATCCACGAGCACAGCGTACATGGACCTGCGCAGCCTGAGATCTGACGAC  273
V  94.2% (275/292)  IGHV1-69*12  181  ........G....A............G.............................C........G...A................G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  F  C  A  K  T  I  A  G  R  L  D  V  F  D  V  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_6924   274  ACGGCCGTGTATTTCTGTGCGAAGACTATAGCAGGTCGATTGGATGTTTTTGATGTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  363
V  94.2% (275/292)  IGHV1-69*12  271  .............A........--------------------------------------------------------------------  292
                                       T  A  V  Y  Y  C  A                                                                      
D  91.7% (11/12)    IGHD6-6*01   4    --------------------------........C...----------------------------------------------------  15
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------------..................................  47

                                       
                                       
                    Query_6924   364  G  364
J  100.0% (35/35)   IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_158731

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           305     3e-85
IGHD7-27*01                                                                                           18.0    0.59 
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCGACTTGAAC	AACTGGGGA	TGGGCAGGGGAGGGTGTTTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCGACTTGAACAACTGGGGATGGGCAGGGGAGGGTGTTTATGATGTC	ATDLNNWGWAGEGVYDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	218	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  I  S  R  Y  Y  W  N  W  I  R  Q  P  P  G  K  A  M  E 
                    Query_6925   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGCCTCCATCAGTCGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGCAATGGAG  90
V  90.5% (218/241)  IGHV4-59*01  49   ...................C...........G..........A............G..........................G.C.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  T  Y  H  T  G  D  T  D  Y  N  P  S  L  R  N  R  V  A  I  S  M  D  A  S  K  N 
                    Query_6925   91   TGGATCGGATATACCTATCACACTGGGGACACCGACTACAACCCCTCCCTCAGGAATCGAGTCGCCATATCAATGGACGCGTCCAAGAAC  180
V  90.5% (218/241)  IGHV4-59*01  139  .....T..G....T....T...G....AG....A..................A..G.......A........G.A...A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  D  L  N  N  W  G  W  A  G 
                    Query_6925   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACGGCTGCGGACACGGCCGTATACTACTGTGCGACCGACTTGAACAACTGGGGATGGGCAGGG  270
V  90.5% (218/241)  IGHV4-59*01  229  .............................C.................G..T..........-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD7-27*01  3    ------------------------------------------------------------------------.........---------  11

                                      ----------------->                                  
                                       E  G  V  Y  D  V  W  G  Q  G  R  M  V  T  V  S  S  
                    Query_6925   271  GAGGGTGTTTATGATGTCTGGGGCCAAGGGAGAATGGTCACCGTCTCTTCAG  322
J  97.6% (40/41)    IGHJ3*01     10   -----------....................C....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_158730

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD1-1*01                                                                                            10.3    112  
IGHJ1*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ1*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TG	ACGAC	CTAA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGACGACCTAAAC	AKDDDLN	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  N  Y  A  M  N  W  V  R  *  A  P  G  K  G  L  
                    Query_6926   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATAACTATGCCATGAACTGGGTCCGCTAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   .........................................AGC.G...........G..........C.....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  G  V  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6926   91   AGTGGGTCTCAACCATTAGTGGTAGTGGAGTTACCACATACTATGCAGACTCCGTAAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-23*01  137  ...........G.T..............T.G..G.........C...........G..................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  D  D  L  N  W  G  
                    Query_6926   181  AGAGCACGCTGTACCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTTTATTACTGCGCGAAAGATGACGACCTAAACTGGGGCC  270
V  92.8% (232/250)  IGHV3-23*01  227  ...A.........T..........................G...........A........T........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD1-1*01   13   ------------------------------------------------------------------------.....-------------  17
J  100.0% (36/36)   IGHJ1*01     17   ---------------------------------------------------------------------------------.........  25

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_6926   271  AGGGCACCCTGGTCACCGTCTCCTCAG  297
J  100.0% (36/36)   IGHJ1*01     26   ...........................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_7148

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           315     5e-88
IGHD2-21*02                                                                                           31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCGT	GCATTTTGTGGTGATGACTGCT	TCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGTGCATTTTGTGGTGATGACTGCTTCCCCTTTGACTAC	ARRAFCGDDCFPFDY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	221	20	0	91.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  F  N  I  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_6927   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCTTCAACATTTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  91.7% (221/241)  IGHV4-59*08  50   .....TCC...A....C..................A...GT.G............C..................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  S  Y  S  G  T  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  S  S  K  N  
                    Query_6927   94   GGATTGGGTATATCTCTTACAGTGGGACCACCAACTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGTAGACTCGTCCAAGAATC  183
V  91.7% (221/241)  IGHV4-59*08  140  ...............A...........G......................A..........................A..........C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  V  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  R  A  F  C  G  D  D  C  F  
                    Query_6927   184  AGGTCTCCCTGAAACTGACCTCTGTGACCGCCGCAGACACGGCCATATATTACTGTGCGAGGCGTGCATTTTGTGGTGATGACTGCTTCC  273
V  91.7% (221/241)  IGHV4-59*08  230  ..T..........G....G.........................G.G..............-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  90.9% (20/22)    IGHD2-21*02  2    -----------------------------------------------------------------....A........G........---  23

                                      ---------->                                  
                                      P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6927   274  CCTTTGACTACTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  318
J  97.7% (43/44)    IGHJ4*02     5    -..............................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_34559

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            338     5e-95
IGHD6-6*01                                                                                            12.2    32   
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CAAG	TCGTCC	GAAATCGACA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACAAGTCGTCCGAAATCGACAACTTCTACGGTTTGGACGTC	AKDKSSEIDNFYGLDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  F  G  F  T  F  E  D  Y  A  M  H  W  V  R  Q  G  P  G  K  G  L  
                    Query_6928  1    GGTCCCTGAGACTCTCCTGTGCAGCCTTTGGATTCACGTTTGAAGATTATGCCATGCACTGGGTCCGGCAAGGTCCAGGGAAGGGCCTGG  90
V  93.2% (233/250)  IGHV3-9*01  47   ...........................C.........C.....T............................C.................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  I  S  W  N  G  Y  T  I  A  Y  A  D  S  V  K  G  R  F  T  L  S  R  D  N  A  
                    Query_6928  91   AATGGGTCTCAGGAATTAGTTGGAATGGTTATACCATAGCCTATGCGGACTCTGTGAAGGGCCGATTCACCCTCTCCAGAGACAACGCCA  180
V  93.2% (233/250)  IGHV3-9*01  137  .G...........T............A..GG..G.....G...............................A..................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                     R  N  S  L  Y  L  Q  M  N  S  L  G  A  D  D  T  A  F  Y  Y  C  A  K  D  K  S  S  E  I  D  
                    Query_6928  181  GGAACTCCCTGTATCTGCAAATGAACAGTCTGGGAGCTGACGACACGGCCTTCTATTATTGTGCAAAAGACAAGTCGTCCGAAATCGACA  270
V  93.2% (233/250)  IGHV3-9*01  227  A...............................A.......G...........G.....C...........--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD6-6*01  13   --------------------------------------------------------------------------......----------  18

                                     T------------------>                                 
                                     N  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6928  271  ACTTCTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.2% (51/53)    IGHJ6*02    10   ...A.......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_150129

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_6929   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCCACTTA  90
V  96.2% (280/291)  IGHV5-51*01  6    ..................................................................................A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  P
                    Query_6929   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  96.2% (280/291)  IGHV5-51*01  96   C.......G.................................................T.................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_6929   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  96.2% (280/291)  IGHV5-51*01  186  .......C.....................C...........................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_6929   271  CATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  96.2% (280/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD1-26*01  4    -----------------------------...G....A.....-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------......TA....................................  49

                                                   
                                        T  V  S  S 
                    Query_6929   361  CACCGTCTCGTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_150126

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	247	223	21	3	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_6930   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  87
V  90.3% (223/247)  IGHV4-4*02   49   ..................GC.........T...TCC......A..AG........GG.......................G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  K 
                    Query_6930   88   GAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCAAG  177
V  90.3% (223/247)  IGHV4-4*02   139  .......................T......A................................G.......A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G  W 
                    Query_6930   178  AATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGTGGGTAGCAGTGGCTGG  267
V  90.3% (223/247)  IGHV4-4*02   229  ..CC.GT..........G....GC..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-19*01  6    -----------------------------------------------------------------------------.............  18

                                      -------->                                
                                       L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_6930   268  CTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  308
J  95.0% (38/40)    IGHJ4*02     7    -......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_34556

Length=418
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           371     8e-105
IGHD3-3*02                                                                                            12.2    39    
IGHJ3*02                                                                                              85.3    9e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGAC	CATATTTGG	GAATATGTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGACCATATTTGGGAATATGTATGATGCTTTTAATATC	ARPTIFGNMYDAFNI	317	361	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	103	98	70	1	27	71.4
CDR1-IMGT	104	127	24	23	1	0	95.8
FR2-IMGT	128	178	51	50	1	0	98
CDR2-IMGT	179	202	24	23	1	0	95.8
FR3-IMGT	203	316	114	107	7	0	93.9
CDR3-IMGT (germline)	317	322	6	6	0	0	100
Total	N/A	N/A	317	279	11	27	88


Alignments

                                      <--------------------------------------------FR1-IMGT-------------------------------------
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  N  
                    Query_6931   6    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAACT  95
V  88.0% (279/317)  IGHV1-69*01  5    ...................G.................................................---------------------  73
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A                       

                                      -------><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><------
                                      F  A  S  G  G  T  F  S  N  Y  A  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  L  
                    Query_6931   96   TTGCTTCTGGAGGCACCTTCAGCAACTATGCTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCCTCC  185
V  88.0% (279/317)  IGHV1-69*01  74   ------..................G...........G.................................................A...  157
                                            S  G  G  T  F  S  S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  

                                      -CDR2-IMGT------><----------------------------------------------------FR3-IMGT------------
                                      P  I  F  G  T  A  S  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  A  S  T  T  A  Y  M  E  
                    Query_6931   186  CTATCTTTGGTACAGCAAGCTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAAGCCTCGACCACAGCCTACATGGAGC  275
V  88.0% (279/317)  IGHV1-69*01  158  ..................A..............................................T..A...G.................  247
                                      P  I  F  G  T  A  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  

                                      ----------------------------------------><-----------------CDR3-IMGT----------------->    
                                      L  S  S  L  R  S  E  D  T  A  I  Y  Y  C  A  R  P  T  I  F  G  N  M  Y  D  A  F  N  I  W  
                    Query_6931   276  TGAGTAGCCTGAGATCTGAGGACACGGCCATATATTACTGTGCGAGACCGACCATATTTGGGAATATGTATGATGCTTTTAATATCTGGG  365
V  88.0% (279/317)  IGHV1-69*01  248  ....C........................G.G...............-------------------------------------------  294
                                      L  S  S  L  R  S  E  D  T  A  V  Y  Y  C  A  R                                            
D  88.9% (8/9)      IGHD3-3*02   8    ----------------------------------------------------...T.....-----------------------------  16
J  96.0% (48/50)    IGHJ3*02     1    ----------------------------------------------------------------------..........G.........  20

                                                                    
                                      G  Q  G  T  M  V  T  V  S  S  
                    Query_6931   366  GCCAAGGGACAATGGTCACCGTCTCCTCAG  395
J  96.0% (48/50)    IGHJ3*02     21   .........................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41024880


Query= Query_7147

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_6932   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_6932   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_6932   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_6932   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_7146

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           428     3e-122
IGHD2-2*02                                                                                            16.1    2.6   
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-2*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAAGGAGT	TTGTAGTGATATGAGTTGCTATA	TTTGGGA	TGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAAGGAGTTTGTAGTGATATGAGTTGCTATATTTGGGATGACGCCTTTGATATT	ARDKGVCSDMSCYIWDDAFDI	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	282	8	0	97.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  I  Y 
                    Query_6933   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTAGCATCTAC  91
V  97.2% (282/290)  IGHV1-18*04  7    ..................................................................................C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_6933   92   GGTATCTCCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAACTATGCACAG  181
V  97.2% (282/290)  IGHV1-18*04  97   ......AG.....................................................C............................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_6933   182  AACCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  97.2% (282/290)  IGHV1-18*04  187  ..G.........................................................C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------------CDR3-IMGT-------------------------->               
                                       V  Y  Y  C  A  R  D  K  G  V  C  S  D  M  S  C  Y  I  W  D  D  A  F  D  I  W  G  Q  G  T 
                    Query_6933   272  GTGTACTACTGTGCGAGAGATAAAGGAGTTTGTAGTGATATGAGTTGCTATATTTGGGATGACGCCTTTGATATTTGGGGCCAAGGGACA  361
V  97.2% (282/290)  IGHV1-18*04  277  .....T..............----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  78.3% (18/23)    IGHD2-2*02   7    -----------------------------.......AG..CC..C.......--------------------------------------  29
J  94.0% (47/50)    IGHJ3*02     1    -----------------------------------------------------------...T..T........C...............  31

                                                         
                                       M  V  T  V  S  S  
                    Query_6933   362  ATGGTCACCGTCTCTTCAG  380
J  94.0% (47/50)    IGHJ3*02     32   ...................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_7141

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           344     6e-97
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_6934   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.4% (234/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  P  V  D  T  S 
                    Query_6934   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATACCTGTAGACACGTCC  180
V  94.4% (234/248)  IGHV4-39*01  139  .....................T..........................C.........A................T.C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_6934   181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.4% (234/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_6934   271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_7140

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           347     8e-98
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ4*01                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	ACGT	TATTACTACGATAGTAGTGCTTA	CCGCGAGGAGTATCCTTTCATTTTTCTGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAACGTTATTACTACGATAGTAGTGCTTACCGCGAGGAGTATCCTTTCATTTTTCTGAACGACTAC	ARERYYYDSSAYREEYPFIFLNDY	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6935   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-48*03  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  H  I  S  S  D  G  D  D  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6935   91   AGTGGATTTCACACATTAGTAGTGATGGTGATGACATTTACTACGCAGACTCTGTGAAGGGCCGATTCACAATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-48*03  137  .....G.....T...........AG....AG.AC...A................................C...................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  V  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  R  Y  Y  Y  D  S  
                    Query_6935   181  AGAACTCACTGTATCTGCAAGTGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGGGAACGTTATTACTACGATAGTA  270
V  94.4% (236/250)  IGHV3-48*03  227  ....................A..............................................A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.3% (21/23)    IGHD3-22*01  2    --------------------------------------------------------------------------........T.......  17

                                      ----CDR3-IMGT------------------------------>                                  
                                      S  A  Y  R  E  E  Y  P  F  I  F  L  N  D  Y  W  G  H  G  T  L  V  T  V  S  S  
                    Query_6935   271  GTGCTTACCGCGAGGAGTATCCTTTCATTTTTCTGAACGACTACTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  348
D  91.3% (21/23)    IGHD3-22*01  18   ...G...-----------------------------------------------------------------------  24
J  97.5% (39/40)    IGHJ4*01     9    --------------------------------------..............A.........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_7143

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           330     1e-92
IGHD1-26*01                                                                                           12.2    35   
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TA	GAGCTA	ATCGGGGGCAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAGAGCTAATCGGGGGCAGTTTGACTAC	ASRANRGQFDY	290	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	289	120	99	15	6	82.5
CDR3-IMGT (germline)	290	294	5	5	0	0	100
Total	N/A	N/A	293	254	33	6	86.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  V  K  V  S  C  K  A  V  G  K  N  F  F  S  Y 
                    Query_6936   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGACTCAGTGAAGGTCTCCTGCAAGGCTGTTGGTAAAAACTTTTTCAGTTAT  91
V  86.7% (254/293)  IGHV1-18*01  7    ........................................C.........................TC....T.C.C....AC...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  I  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  S  I  N  A  Y  D  S  K  T  H  Y  A  Q 
                    Query_6936   92   GGTATCATCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCGTCGATCAACGCGTACGATAGTAAGACACACTATGCACAG  181
V  86.7% (254/293)  IGHV1-18*01  97   .......G.........................................GA.G.....G...T...A..G....C...A...........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      --------------------------------------------FR3-IMGT--------------------------------------
                                       K  F  L  G  R  V  S  L  S  T  D  T  D  L  S  T  S  T  P  Y  M  E  V  R  G  L  T  Y  D  D 
                    Query_6936   182  AAGTTCCTGGGCAGAGTCTCCTTGAGCACAGATACAGATCTCTCCACGAGCACGCCCTATATGGAGGTGAGGGGCCTGACATATGACGAC  271
V  86.7% (254/293)  IGHV1-18*01  187  ...C...A..........A..A...C......C...------...........AG....C......C.....A......G..C.......  270
                                       K  L  Q  G  R  V  T  M  T  T  D  T        S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------CDR3-IMGT----------->                                  
                                       T  A  V  Y  Y  C  A  S  R  A  N  R  G  Q  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_6936   272  ACGGCCGTCTATTACTGTGCGAGTAGAGCTAATCGGGGGCAGTTTGACTACTGGGGCCAGGGAACCCTGGTCAGCGTCTCCTCAG  356
V  86.7% (254/293)  IGHV1-18*01  271  ........G..............--------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                 
D  100.0% (6/6)     IGHD1-26*01  11   -------------------------......------------------------------------------------------  16
J  97.7% (42/43)    IGHJ4*02     6    ------------------------------------------...............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_34550

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           279     3e-77
IGHD3-10*02                                                                                           14.1    9.1  
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	CCGCAGCGCA	ATGTTCG	CAGGCTCGCCATCGGGAGCCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGACCGCAGCGCAATGTTCGCAGGCTCGCCATCGGGAGCCAACTACTACTCCTACGGGATGGACGTC	AKDRSAMFAGSPSGANYYSYGMDV	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	214	36	0	85.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  T  A  H  G  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_6937   1    GGTCCCTGAGACTCTCCTGTGCAACCTCAGGATTCACCTTCACCGCCCATGGCATGCACTGGGTCCGCCAGGCTCCTGGCAGGGGTCTAG  90
V  85.6% (214/250)  IGHV3-30*18  47   .......................G....T.............GTAG.T............................A....A...G..G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  L  S  F  D  G  G  G  R  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  V  S  
                    Query_6937   91   AGTGGGTGGCCGTTTTGTCATTTGATGGAGGTGGCAGGTATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGTCTCCA  180
V  85.6% (214/250)  IGHV3-30*18  137  ..........A...A.A....A.......A..AAT.AA..C..........................................AAT....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      T  N  T  V  Y  L  Q  M  A  S  L  R  P  D  D  T  A  V  Y  Y  C  A  K  D  R  S  A  M  F  A  
                    Query_6937   181  CGAACACGGTGTATCTGCAAATGGCCAGCCTGCGACCTGACGACACAGCTGTCTATTATTGTGCGAAGGACCGCAGCGCAATGTTCGCAG  270
V  85.6% (214/250)  IGHV3-30*18  227  A.......C..............AA.......A..G....G.....G.....G.....C........A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-10*02  9    --------------------------------------------------------------------------------.......---  15

                                      ----CDR3-IMGT------------------------------>                                 
                                      G  S  P  S  G  A  N  Y  Y  S  Y  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_6937   271  GCTCGCCATCGGGAGCCAACTACTACTCCTACGGGATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  347
J  94.9% (56/59)    IGHJ6*02     4    ------------------.........A......T...............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_310608

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           300     8e-84
IGHD5-12*01                                                                                           18.0    0.60 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATA	ACTTTGGTCCT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTCCTAACTGGTTCGACCCC	ARDPTGSGYNFGPNWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	218	26	0	89.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_6938   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  89.3% (218/244)  IGHV4-59*01  50   .....TCC...A....C.............G........G.AGT.A......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S  
                    Query_6938   94   GGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGCC  183
V  89.3% (218/244)  IGHV4-59*01  140  .......G......T..........G.GC.............................A.T.A....A...................A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F  
                    Query_6938   184  AGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTTG  273
V  89.3% (218/244)  IGHV4-59*01  230  .............G.....C..................A.......G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (9/9)     IGHD5-12*01  1    ---------------------------------------------------------------------------.........------  9

                                      ------------------->                                  
                                      G  P  N  W  F  D  P  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_6938   274  GTCCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  327
J  98.0% (48/49)    IGHJ5*02     3    -----.................................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_310605

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            318     6e-89
IGHD2-21*02                                                                                           16.1    2.4  
IGHJ3*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*02	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGCCCAA	GGTGACTG	GCCATAATGAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGCCCAAGGTGACTGGCCATAATGAATTTGATATC	REIGPR*LAIMNLIS	263	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	49	50	44	5	1	88
CDR1-IMGT	50	76	27	20	7	0	74.1
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	148	21	16	5	0	76.2
FR3-IMGT	149	262	114	101	13	0	88.6
CDR3-IMGT (germline)	263	270	8	8	0	0	100
Total	N/A	N/A	271	239	31	1	88.2


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  E  T  L  S   S  R  A  M  S  L  V  A  P  L  L  I  L  T  G  G  I  G  S 
                    Query_6939   1    CAGGACTGGTGAAGCCCTCGGAGACCCTTTCC-TCACGTGCGATGTCTCTGGTGGCTCCATTGTTAATTCTAACTGGTGGAATTGGGTCC  89
V  88.2% (239/271)  IGHV4-4*02   26   ................T....G......G...C....C....C..................CAGC.G.AG...........G........  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                       A  S  P  Q  G  R  G  W  S  G  L  G  K  C  I  I  V  G  K  S  T  T  I  R  P  *  R  V  E  S 
                    Query_6939   90   GCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATGTATCATAGTGGGAAAGTCAACTACAATCCGTCCCTGAAGAGTCGAGTCG  179
V  88.2% (239/271)  IGHV4-4*02   116  ........................................C.............GCAC.........C........C............A  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                       L  Y  Q  Q  T  S  P  R  I  S  S  P  *  N  *  L  L  *  P  P  R  T  R  P  Y  I  T  V  R  E 
                    Query_6939   180  TTATATCAGCAGACGAGTCCAAGAATCAGTTCTCCCTGAAATTGACTTCTGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGAGAG  269
V  88.2% (239/271)  IGHV4-4*02   206  CC.......T....A..........C..............GC...GC..........................G................  295
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  

                                      -----------CDR3-IMGT----------------->                                  
                                       I  G  P  R  *  L  A  I  M  N  L  I  S  G  A  K  G  Q  R  S  S  S  L  Q 
                    Query_6939   270  ATAGGCCCAAGGTGACTGGCCATAATGAATTTGATATCTGGGGCCAAGGGACAACGGTCATCGTCTCTTCAG  341
V  88.2% (239/271)  IGHV4-4*02   296  .-----------------------------------------------------------------------  296
                                                                                                              
D  100.0% (8/8)     IGHD2-21*02  14   ----------........------------------------------------------------------  21
J  95.3% (41/43)    IGHJ3*02     8    -----------------------------.........................T.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_77530

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     2e-124
IGHD3-22*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCCGT	TGGTTAT	AATTCCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTC	ARAVGYNSDYYYGMDV	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	71	3	0	95.9
CDR1-IMGT	79	102	24	24	0	0	100
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	111	3	0	97.4
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	286	7	0	97.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  K  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_6940   5    AGGTCCAGCTTGTGCAGTCTGGAGCAAAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  94
V  97.6% (286/293)  IGHV5-51*01  2    ....G.....G...............G...............................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_6940   95   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCAGATACA  184
V  97.6% (286/293)  IGHV5-51*01  92   .......................................................G..................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  P  S  F  Q  G  Q  V  T  I  S  A  D  K  A  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_6940   185  GACCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGGCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  97.6% (286/293)  IGHV5-51*01  182  .C.......................................T.......C........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      T  A  M  Y  Y  C  A  R  A  V  G  Y  N  S  D  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  
                    Query_6940   275  CCGCCATGTATTACTGTGCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCG  364
V  97.6% (286/293)  IGHV5-51*01  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD3-22*01  19   ----------------------------.......-------------------------------------------------------  25
J  98.2% (55/56)    IGHJ6*02     7    ------------------------------------------................................................  54

                                              
                                      V  P  S 
                    Query_6940   365  TCCCCTCA  372
J  98.2% (55/56)    IGHJ6*02     55   ..T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_310607

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           327     9e-92
IGHD6-13*01                                                                                           21.8    0.041
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD6-13*01	IGHJ3*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ERRSWY*CRRCF*C	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	27	26	19	5	2	73.1
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	249	231	16	2	92.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  F  S  C  T    L  W  W  L  H  Q  Q  W  W  L  L  L  E  L  D  P  P  A  P  R  E  G  P
                    Query_6941   4    CCCTGAGATTCTCCTGTACT--CTCTGGTGGCTCCATCAGCAGTGGTGGCTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGCC  91
V  92.8% (231/249)  IGHV4-31*02  50   .....TCCC..A........GT...........................T.A........G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        G  V  D  W  V  H  P  L  Q  W  E  H  L  L  Q  P  V  P  Q  E  S  S  Y  H  V  S  R  H  V  *
                    Query_6941   92   TGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCTA  181
V  92.8% (231/249)  IGHV4-31*02  140  ....................T..................A.................................A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        E  P  I  L  P  E  A  D  F  C  D  C  R  G  H  G  R  V  F  L  C  E  R  R  S  W  Y  *  C  R
                    Query_6941   182  AGAACCAATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTAG  271
V  92.8% (231/249)  IGHV4-31*02  230  .......G..........A.....GC...............................A...........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  11   -----------------------------------------------------------------------...........--------  21

                                      ---------------->                                  
                                        R  C  F  *  C  L  G  P  R  D  N  G  H  R  L  F   
                    Query_6941   272  GCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  98.0% (48/49)    IGHJ3*01     2    --.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_310606

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD2-21*01                                                                                           18.0    0.69  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	G	ATTGCGGTGGTG	TAGTGATGGAACTTGTTACTCTGGTTCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTAT	ARRLRWCSDGTCYSGSFEY	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	294	277	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  K  F  T  
                    Query_6942   4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAAGTTTACCA  93
V  94.2% (277/294)  IGHV5-51*01  2    ..G...............................A........G.....................................GC.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  F  P  R  D  S  D  T  R  Y  
                    Query_6942   94   GCTATTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTCGTGACTCCGATACCAGATATA  183
V  94.2% (277/294)  IGHV5-51*01  92   ....C......................T...........................G.......A....G.......T...........C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  Q  D  Q  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  D  S  L  K  A  S  D  
                    Query_6942   184  ACCCGTCCTTCCAAGACCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTACCTGCAGTGGGACAGCCTGAAGGCCTCGGACA  273
V  94.2% (277/294)  IGHV5-51*01  182  G..............G.......................A............................AG....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  M  Y  Y  C  A  R  R  L  R  W  C  S  D  G  T  C  Y  S  G  S  F  E  Y  W  G  Q  G  T  
                    Query_6942   274  CCGCCATGTATTACTGTGCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTATTGGGGCCAGGGAACCC  363
V  94.2% (277/294)  IGHV5-51*01  272  ........................------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  91.7% (11/12)    IGHD2-21*01  6    -------------------------....T.......-----------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------------------------.....C..C................  30

                                                        
                                      L  V  T  V  S  S  
                    Query_6942   364  TGGTCACCGTCTCCTCAG  381
J  95.3% (41/43)    IGHJ4*02     31   ..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_310601

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD6-13*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	ARHRYLGPRQQATENDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  Q  G  S  G  Y  T  F  T  T  Y
                    Query_6943   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTACCACCTA  90
V  95.9% (279/291)  IGHV5-51*01  6    ..........................................G..................A...............G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  P  R  Y  S  P
                    Query_6943   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAGTCATCTATCCTGGTGACTCTGATCCCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   C.......G..........................................GA.......................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6943   181  GTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  ......................A................................C..........C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_6943   271  CATGTATTACTGTGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  95.9% (279/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-13*01  8    ---------------------------------------.......--------------------------------------------  14
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_6943   361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_310600

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         338     5e-95
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	N/A	N/A	TCGCCTGCCAACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGATCGCCTGCCAACCCCTACTACCACGCTCTGGACGTC	ARSPANPYYHALDV	245	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	28	27	1	0	96.4
CDR1-IMGT	29	58	30	27	3	0	90
FR2-IMGT	59	109	51	49	2	0	96.1
CDR2-IMGT	110	130	21	20	1	0	95.2
FR3-IMGT	131	244	114	104	10	0	91.2
CDR3-IMGT (germline)	245	250	6	6	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                        <---------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT---
                                          T  L  S  L  T  C  T  V  S  G  V  Y  I  S  N  G  G  Y  S  W  T  W  I  R  Q  P  P  G  R  G
                    Query_6944     1    GACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTACATCAGCAATGGTGGTTACTCCTGGACCTGGATCCGGCAGCCACCAGGGAGGGG  90
V  93.2% (233/250)  IGHV4-30-2*01  48   ...................G............G..C........G.................G.......................A...  137
                                          T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G

                                        ------------------><-----CDR2-IMGT-----><-------------------------------------------------
                                          L  E  W  I  G  Y  I  Y  Q  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  R  S
                    Query_6944     91   CCTGGAGTGGATTGGGTACATCTATCAAAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGCGTCACCATATCGGTAGACAGGTC  180
V  93.2% (233/250)  IGHV4-30-2*01  138  ...........................T...............................A......A...........A...........  227
                                          L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S

                                        ---FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT
                                          K  N  Q  F  S  V  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  A  N  P  Y  Y
                    Query_6944     181  CAAAAACCAGTTCTCCGTTAACTTGAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGATCGCCTGCCAACCCCTACTA  270
V  93.2% (233/250)  IGHV4-30-2*01  228  ...G............C.G..GC....C..........................G...............--------------------  297
                                          K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                     
J  92.7% (51/55)    IGHJ6*02       8    ------------------------------------------------------------------------------------......  13

                                        --------------->                                 
                                          H  A  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_6944     271  CCACGCTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  319
J  92.7% (51/55)    IGHJ6*02       14   .T...G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_310603

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	73	1	0	98.6
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	280	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  
                    Query_6945   4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCA  93
V  95.6% (280/293)  IGHV5-51*03  2    ..G..............................................................................G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  
                    Query_6945   94   GCTACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACA  183
V  95.6% (280/293)  IGHV5-51*03  92   ............G.......................A...................................A....G.....A......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  
                    Query_6945   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACA  273
V  95.6% (280/293)  IGHV5-51*03  182  .................................................C...........G...............A.....T......  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_6945   274  CCGCCGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  363
V  95.6% (280/293)  IGHV5-51*03  272  .....A.G...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD6-19*01  5    --------------------------............----------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_6945   364  CCTCAG  369
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_310602

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         402     3e-114
IGHD4-17*01                                                                                           12.2    37    
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCG	CGGTGA	AATCGACGGAGTA	TACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGCGGTGAAATCGACGGAGTATACCACTACAACAGTATGGACGTC	ARLRGEIDGVYHYNSMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  T  T  Y
                    Query_6946     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCTTCTGGATACAGCTTCACCACCTA  90
V  94.5% (273/289)  IGHV5-10-1*01  6    ..............................A..................................G...............T....G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  L  P  G  K  G  L  E  W  M  G  T  I  D  P  D  D  S  Y  T  N  Y  S  P
                    Query_6946     91   CTGGATCACCTGGGTGCGCCAGCTGCCCGGCAAAGGCCTGGAGTGGATGGGGACGATTGATCCTGATGACTCTTATACCAACTACAGCCC  180
V  94.5% (273/289)  IGHV5-10-1*01  96   ........G.............A.......G......................G..........AG........................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  T  D  K  S  L  T  T  A  H  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6946     181  GTCCTTCCAAGGCCACGTCACCATCTCAACTGACAAGTCCCTCACCACTGCCCACCTCCAATGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (273/289)  IGHV5-10-1*01  186  ............................G...........A...G.......T....G..G.............................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------------CDR3-IMGT--------------------->                       
                                          M  Y  Y  C  A  R  L  R  G  E  I  D  G  V  Y  H  Y  N  S  M  D  V  W  G  Q  G  T  T  V  T
                    Query_6946     271  CATGTATTACTGTGCGAGACTTCGCGGTGAAATCGACGGAGTATACCACTACAACAGTATGGACGTCTGGGGCCAAGGGACCACGGTCAC  360
V  94.5% (273/289)  IGHV5-10-1*01  276  ...................-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD4-17*01    7    ------------------------......------------------------------------------------------------  12
J  94.7% (54/57)    IGHJ6*02       6    -------------------------------------------...T.....T..G..................................  52

                                                  
                                          V  S  S 
                    Query_6946     361  CGTCTCCTCA  370
J  94.7% (54/57)    IGHJ6*02       53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_38027

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_6947   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_6947   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_6947   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_6947   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_190292

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           403     1e-114
IGHD4-17*01                                                                                           18.0    0.67  
IGHJ6*01                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAG	CTACGGTGA	GTCCGAGTACTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTC	ARDLATVSPSTFYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  T  S  Y 
                    Query_6948   2    CAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCTTCTGGTTACACCTTTACCAGTTAC  91
V  94.5% (274/290)  IGHV1-18*04  7    ....................T..........................................G......................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_6948   92   GGTATCACTTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  181
V  94.5% (274/290)  IGHV1-18*04  97   .......GC........A..............A................................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  S  D  D  T  A 
                    Query_6948   182  ATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.5% (274/290)  IGHV1-18*04  187  .A.C...A..G.................C....................C..........C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  T  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_6948   272  GTGTATTACTGTGCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTCTGGGGTCAAGGGACCACGGTCACC  361
V  94.5% (274/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------.........--------------------------------------------------------  12
J  98.1% (52/53)    IGHJ6*01     11   -----------------------------------------------........................G..................  53

                                                
                                       V  S  S  
                    Query_6948   362  GTCTCCTCAG  371
J  98.1% (52/53)    IGHJ6*01     54   ..........  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_214589

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            350     8e-99
IGHD2-8*02                                                                                            19.9    0.15 
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AAAGCGGGCTC	TACTGGTGGT	A	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAAAGCGGGCTCTACTGGTGGTAACTTTGACTAC	ARKAGSTGGNFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  I  F  T  H  Y  W  M  S  W  V  R  Q  A  P  G  K  W  L  
                    Query_6949  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTTACTCACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGTGGCTGG  90
V  95.2% (236/248)  IGHV3-7*03  47   ....................................CC....G.AG.....................................G......  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  D  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  P  R  D  N  A  
                    Query_6949  91   AGTGGGTTGCCGACATAAAGCAGGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCCCCAGAGACAACGCCA  180
V  95.2% (236/248)  IGHV3-7*03  137  .......G...A..........A...................................................T...............  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                     K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  K  A  G  S  T  G  G  
                    Query_6949  181  AGAACTCAGTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAAAAGCGGGCTCTACTGGTGGTA  270
V  95.2% (236/248)  IGHV3-7*03  227  ........C.G.........................................................----------------------  294
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD2-8*02  10   -------------------------------------------------------------------------------..........-  19

                                     ---------->                                  
                                     N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6949  271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (45/45)   IGHJ4*02    4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_77533

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD5-18*01                                                                                           37.2    1e-06 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCTTACT	TGGATACAGCTATGGTTAC	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCTTACTTGGATACAGCTATGGTTACCACTTTTACTAC	ARALLGYSYGYHFYY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	277	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_6950   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  96.2% (277/288)  IGHV5-51*01  6    .............................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_6950   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  96.2% (277/288)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  D  L  L  W  S  C  L  K  A  S  Y  P  A
                    Query_6950   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCGACCTGCTGTGGAGCTGCCTGAAGGCTTCGTACCCCGC  270
V  96.2% (277/288)  IGHV5-51*01  186  .............................C......................T......A.......A..........C...G..A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  A  L  L  G  Y  S  Y  G  Y  H  F  Y  Y  W  G  Q  G  T  L  V  T  F  S  S
                    Query_6950   271  CATGTATTACTGTGCGAGGGCCTTACTTGGATACAGCTATGGTTACCACTTTTACTACTGGGGCCAGGGAACCCTGGTCACCTTTTCCTC  360
V  96.2% (277/288)  IGHV5-51*01  276  ..................------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  100.0% (19/19)   IGHD5-18*01  2    ---------------------------...................--------------------------------------------  20
J  93.3% (42/45)    IGHJ4*02     4    -----------------------------------------------.....G.............................G.C.....  46

                                        
                                        
                    Query_6950   361  AG  362
J  93.3% (42/45)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_318990

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         338     5e-95
IGHD3-9*01                                                                                            27.6    7e-04
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GTCTCGGA	GATATTTTGACTGG	GGCAGGACTGGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGTCTCGGAGATATTTTGACTGGGGCAGGACTGGGCGAC	ARGLGDILTGAGLGD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  N  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_6951     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAATAGTGGTGGTTATTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  93.2% (233/250)  IGHV4-30-4*01  49   ..................A.....................GC.......A...C........T...........................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  M  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  G  D  T  S 
                    Query_6951     91   CTGGAGTGGATTGGATACATGTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTGACCATTTCTGGAGACACGTCC  180
V  93.2% (233/250)  IGHV4-30-4*01  139  ..............G.....C.............G.................................T.....A..A.T..........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         T  D  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  G  D  I  L  T 
                    Query_6951     181  ACGGACCAGTTCTCCCTGAAGCTGACCTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCCAGAGGTCTCGGAGATATTTTGACT  270
V  93.2% (233/250)  IGHV4-30-4*01  229  .A.A.....................G.................................C..........--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (14/14)   IGHD3-9*01     8    ------------------------------------------------------------------------------............  19

                                        ----------------->                                  
                                         G  A  G  L  G  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6951     271  GGGGCAGGACTGGGCGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (14/14)   IGHD3-9*01     20   ..--------------------------------------------------  21
J  100.0% (36/36)   IGHJ4*02       13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_148145

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           350     8e-99
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GATAAACAG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGAAGAGAGATAAACAGTGCTTTCGATATC	GREINSAFDI	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  P  F  S  R  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6952   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGCTTCCCCTTCAGTCGATACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-74*01  47   .....................C.........A...A........A.C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  T  D  G  S  S  T  T  Y  A  D  F  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6952   91   TGTGGGTCTCACGTATTAATACTGATGGGAGTAGCACAACCTACGCGGACTTCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (237/250)  IGHV3-74*01  137  .....................G.................G...........C......................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  D  T  M  R  A  E  D  T  A  V  Y  Y  C  G  R  E  I  N  S  A  F  D  
                    Query_6952   181  AGAACACGCTGTATCTGCAAATGGACACCATGAGAGCCGAGGACACGGCTGTGTATTACTGTGGAAGAGAGATAAACAGTGCTTTCGATA  270
V  94.8% (237/250)  IGHV3-74*01  227  .......................A...GTC.................................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  95.7% (45/47)    IGHJ3*02     4    -------------------------------------------------------------------------------......T....  14

                                      ->                                  
                                      I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6952   271  TCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  306
J  95.7% (45/47)    IGHJ3*02     15   .................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_148147

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           445     2e-127
IGHD3-22*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              108     9e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCCGT	TGGTTAT	AATTCCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTC	ARAVGYNSDYYYGMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	287	2	0	99.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_6953   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  99.3% (287/289)  IGHV5-51*01  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_6953   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGACC  180
V  99.3% (287/289)  IGHV5-51*01  96   .......................................................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  A  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6953   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGGCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  99.3% (287/289)  IGHV5-51*01  186  .....................................T....................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        M  Y  Y  C  A  R  A  V  G  Y  N  S  D  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_6953   271  CATGTATTACTGTGCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  99.3% (287/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-22*01  19   ------------------------.......-----------------------------------------------------------  25
J  100.0% (56/56)   IGHJ6*02     7    --------------------------------------....................................................  58

                                          
                                        S 
                    Query_6953   361  CTCA  364
J  100.0% (56/56)   IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_148146

Length=412
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           386     2e-109
IGHD3-3*01                                                                                            46.8    1e-09 
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGAGCTTGAC	TTACGATTTTTGGAGTGGTTATTA	CCCGACC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGAGCTTGACTTACGATTTTTGGAGTGGTTATTACCCGACCACTACTACTACGCTATGGACGTC	ARGELDLRFLEWLLPDHYYYAMDV	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  T  H 
                    Query_6954   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTTCCACTCAC  91
V  92.7% (268/289)  IGHV1-18*04  7    .................................................................................A...GCT..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  K  K  S  I  T  K  Y  A  Q 
                    Query_6954   92   GGTATTAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGCTAAGAAAAGTATCACAAAGTATGCACAG  181
V  92.7% (268/289)  IGHV1-18*04  97   .....C.............................G...........................T.C..TG...A......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  R  D  R  V  T  M  T  T  D  I  S  T  T  T  V  Y  M  E  L  R  S  L  R  S  D  D  A  A 
                    Query_6954   182  AAGTTCCGAGACAGAGTCACCATGACCACAGACATATCCACGACCACAGTCTACATGGAACTGAGGAGCCTGAGATCTGACGACGCGGCC  271
V  92.7% (268/289)  IGHV1-18*04  187  ...C...AG.G.......................C........G.....C.........G........................A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------------CDR3-IMGT------------------------------>      
                                       V  Y  Y  C  A  R  G  E  L  D  L  R  F  L  E  W  L  L  P  D  H  Y  Y  Y  A  M  D  V  W  G 
                    Query_6954   272  GTGTATTACTGTGCGAGAGGGGAGCTTGACTTACGATTTTTGGAGTGGTTATTACCCGACCACTACTACTACGCTATGGACGTCTGGGGC  361
V  92.7% (268/289)  IGHV1-18*04  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (24/24)   IGHD3-3*01   4    ------------------------------........................------------------------------------  27
J  98.2% (55/56)    IGHJ6*02     7    -------------------------------------------------------------............G................  35

                                                                 
                                       Q  G  T  T  V  T  V  S  S 
                    Query_6954   362  CAAGGGACCACGGTCACCGTCTCCTCA  388
J  98.2% (55/56)    IGHJ6*02     36   ...........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40393728


Query= Query_148141

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           352     3e-99
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	AATCAC	GTATCACTATGATAATAATGGTTAT	AAG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATCACGTATCACTATGATAATAATGGTTATAAGTACTTTGACTAC	ARGITYHYDNNGYKYFDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	235	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_6955   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAA  90
V  95.9% (235/245)  IGHV4-34*01  49   ........................................................C...A............................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  I  N  H  G  G  D  S  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6955   91   TGGCTTGGGGAAATCAATCATGGTGGAGACTCTAAGTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.9% (235/245)  IGHV4-34*01  139  ...A.................A.....AG.A.C..C......................................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  I  T  Y  H  Y  D  N  N 
                    Query_6955   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGAATCACGTATCACTATGATAATAAT  270
V  95.9% (235/245)  IGHV4-34*01  229  .................................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  88.0% (22/25)    IGHD3-22*01  1    -----------------------------------------------------------------------....T.........G..G.  19

                                      -------------------->                                  
                                       G  Y  K  Y  F  D  Y  W  S  Q  G  T  L  V  T  V  S  S  
                    Query_6955   271  GGTTATAAGTACTTTGACTACTGGAGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  88.0% (22/25)    IGHD3-22*01  20   ......-------------------------------------------------  25
J  97.8% (45/46)    IGHJ4*02     3    ---------...............G..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_148143

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           394     6e-112
IGHD3-16*01                                                                                           12.2    32    
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTTTCC	TGGGGG	N/A	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTCCTGGGGGTGCTTATGATATC	ARHFPGGAYDI	261	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	22	2	0	91.7
FR2-IMGT	75	125	51	50	1	0	98
CDR2-IMGT	126	146	21	20	1	0	95.2
FR3-IMGT	147	260	114	111	3	0	97.4
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	260	8	0	97


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  F  C  S  W  I  R  
                    Query_6956   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTTCTGCAGCTGGATCCGGC  90
V  97.0% (260/268)  IGHV4-59*08  26   ................T.....................................G.................A...G.............  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_6956   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTCTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  97.0% (260/268)  IGHV4-59*08  116  .......................................A..................................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  H  
                    Query_6956   181  TATCAGTTGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGACCTCTGTGTCCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATT  270
V  97.0% (260/268)  IGHV4-59*08  206  .......A..................................G.......A.....................................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      --CDR3-IMGT----------->                                  
                                      F  P  G  G  A  Y  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6956   271  TTCCTGGGGGTGCTTATGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  327
D  100.0% (6/6)     IGHD3-16*01  17   ----......-----------------------------------------------  22
J  97.9% (46/47)    IGHJ3*02     4    ----------.....T.........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_148142

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           324     8e-91
IGHD6-19*01                                                                                           18.0    0.60 
IGHJ2*01                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAA	CAGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAACAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQQWLPGDWYFDL	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  R  N  Y  W  S  W  I  R  Q  P  P  G  E  R  L  E 
                    Query_6957   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCACTAGAAACTACTGGAGCTGGATCCGGCAGCCCCCAGGTGAGAGACTGGAG  90
V  92.6% (225/243)  IGHV4-59*08  49   ...................C...........G........G...TT...............................GA..G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_6957   91   TGGATTGCATATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  92.6% (225/243)  IGHV4-59*08  139  .......GG......T...........AG...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  F  L  P  A  V  Q  Q  W  L 
                    Query_6957   181  CAGTTCTCCCTGAAGATGACTTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGATTCCTCCCCGCGGTGCAACAGTGGCTG  270
V  92.6% (225/243)  IGHV4-59*08  229  ...............C...GC........................G.................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-19*01  9    ---------------------------------------------------------------------------------.........  17

                                      ----------------------->                                  
                                       P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6957   271  CCAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  328
J  100.0% (51/51)   IGHJ2*01     3    -------...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_148149

Length=316
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           304     9e-85
IGHD4-17*01                                                                                           16.1    2.0  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCG	ACGGTGAC	ACCGAGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACGGTGACACCGAGAATGACTAT	AADGDTENDY	230	259	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	232	3	3	0	0	100
Total	N/A	N/A	220	207	13	0	94.1


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  L  T  F  S  S  F  G  M  H  W  V  R  Q  P  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_6958   13   GTCTGGACTCACCTTCAGTAGCTTTGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTCATATGGTATGA  102
V  94.1% (207/220)  IGHV3-33*01  72   .......T...............A......................G...............................T...........  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  K  K  Y  Y  T  D  S  V  K  G  R  F  I  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_6958   103  TGGAAGTAAGAAATACTATACAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCAAGAACACGTTGTATCTGCAGATGAA  192
V  94.1% (207/220)  IGHV3-33*01  162  .........T.........G........................C............................C..........A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------CDR3-IMGT--------->                       
                                        S  L  R  V  D  D  T  A  V  Y  F  C  A  A  D  G  D  T  E  N  D  Y  W  G  Q  G  T  L  V  T
                    Query_6958   193  CAGCCTGAGAGTCGACGACACGGCTGTCTATTTCTGTGCGGCCGACGGTGACACCGAGAATGACTATTGGGGCCAGGGAACCCTGGTCAC  282
V  94.1% (207/220)  IGHV3-33*01  252  ...........C...G...........G....A.......--------------------------------------------------  291
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                   
D  100.0% (8/8)     IGHD4-17*01  6    --------------------------------------------........--------------------------------------  13
J  97.6% (40/41)    IGHJ4*02     8    ------------------------------------------------------------......C.......................  37

                                                 
                                        V  S  S  
                    Query_6958   283  CGTCTCCTCAG  293
J  97.6% (40/41)    IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30515799


Query= Query_342536

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD5-18*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGT	TGGATACAACTAGGGTTAC	CCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTTGGATACAACTAGGGTTACCCTCACTTTGACTTC	ARGVGYN*GYPHFDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	236	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6959   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (236/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  F  I  Y  Y  A  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_6959   91   TGGATTGGCTTTATCTATTACGCTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGTGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  96.7% (236/244)  IGHV4-59*01  139  ........G.A..........AG......C.............................A..............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  Y  N  *  G  Y  P 
                    Query_6959   181  CAGTTCTCCCTGACGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGGTTGGATACAACTAGGGTTACCCT  270
V  96.7% (236/244)  IGHV4-59*01  229  .............A..................T...............................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  89.5% (17/19)    IGHD5-18*01  2    --------------------------------------------------------------------........G...T......---  20

                                      ----------->                                  
                                       H  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6959   271  CACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.8% (44/45)    IGHJ4*02     4    -.........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_38022

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACAGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	268	18	0	93.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_6960   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  93.7% (268/286)  IGHV5-51*01  6    ..............................A...................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  Q  G  L  E  L  M  G  L  I  Y  P  G  D  S  D  T  W  Y  S  P
                    Query_6960   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCAAGGCCTGGAGTTGATGGGGCTCATCTATCCTGGTGACTCTGATACCTGGTACAGTCC  180
V  93.7% (268/286)  IGHV5-51*01  96   ......................A........A............G.......A..........................A.A.....C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  T  S  A  Y  L  Q  W  T  T  L  K  A  S  D  T  A
                    Query_6960   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCACCTCCGCCTACCTGCAGTGGACCACCCTGAAGGCCTCGGACACCGC  270
V  93.7% (268/286)  IGHV5-51*01  186  ....................C...................A...G.A..................G..G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6960   271  CATTTACTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACAGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  353
V  93.7% (268/286)  IGHV5-51*01  276  ...G..T.........-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------.................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_218480

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            433     1e-123
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAGCGACTTTGGG	GCAGTGGCTGGT	CATGCTCCCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAGCGACTTTGGGGCAGTGGCTGGTCATGCTCCCGGCTAC	ARESDFGAVAGHAPGY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	284	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_6961   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  97.6% (284/291)  IGHV1-2*04   6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  D  Y  A  Q
                    Query_6961   91   CTATATACACTGGGTGCGACAGGCCCCTGGACAAGGCCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAGACTATGCACA  180
V  97.6% (284/291)  IGHV1-2*04   96   ......G.............................G..........................................A..........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  V  N  R  L  K  S  D  D  T  A
                    Query_6961   181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGGTGAACAGGCTGAAATCTGACGACACGGC  270
V  97.6% (284/291)  IGHV1-2*04   186  .............................................................C...G........G...............  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  E  S  D  F  G  A  V  A  G  H  A  P  G  Y  W  G  Q  G  T  L  V  T  V  S
                    Query_6961   271  CGTGTATTACTGTGCGAGAGAGAGCGACTTTGGGGCAGTGGCTGGTCATGCTCCCGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTC  360
V  97.6% (284/291)  IGHV1-2*04   276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  8    ----------------------------------............--------------------------------------------  19
J  100.0% (38/38)   IGHJ4*02     11   ---------------------------------------------------------.................................  43

                                           
                                        S  
                    Query_6961   361  CTCAG  365
J  100.0% (38/38)   IGHJ4*02     44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_218482

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            318     5e-89
IGHD6-19*01                                                                                           21.8    0.039
IGHJ5*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCAGTGGCTGG	CTAC	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCAGTGGCTGGCTACTCGACGTC	VRGSGWLLDV	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  N  T  K  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6962   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATGTTTAATACTAAATGGATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTG  90
V  90.8% (226/249)  IGHV3-7*01   47   ....................................CC....G..GCT.T.......GC.............................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  H  N  A  
                    Query_6962   91   AGTGGGTGGCCATCATAAAGCAGGATGGAAGTGAAAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGACACAACGCCA  180
V  90.8% (226/249)  IGHV3-7*01   137  ............A.........A...........G.............................................G.........  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      N  N  S  V  F  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  V  R  G  S  G  W  L  L  D  
                    Query_6962   181  ATAATTCAGTGTTTCTGCAAATGAACTCCCTGACAGCCGAGGACACGGCTGTGTATTATTGTGTGAGAGGCAGTGGCTGGCTACTCGACG  270
V  90.8% (226/249)  IGHV3-7*01   227  .G..C...C...A.............AG.....G........................C....C.....---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-19*01  8    ---------------------------------------------------------------------...........----------  18
J  88.1% (37/42)    IGHJ5*02     10   ------------------------------------------------------------------------------------.....C  15

                                      ->                                  
                                      V  W  G  Q  G  A  M  V  I  V  S  S  
                    Query_6962   271  TCTGGGGCCAGGGAGCCATGGTCATCGTCTCCTCAG  306
J  88.1% (37/42)    IGHJ5*02     16   C.............A..C......C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_348134

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           389     2e-110
IGHD3-9*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACACCATACGCCGGGT	TTACGATCTTTTGACTGG	N/A	TACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACACCATACGCCGGGTTTACGATCTTTTGACTGGTACCTTGACTCC	ARGHHTPGLRSFDWYLDS	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  R  Y 
                    Query_6963   2    CAGCTGGTGCAGTCTGGAGGTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACGTTTAGCAGATAT  91
V  93.1% (269/289)  IGHV1-18*01  7    ...................C...G.....................................................C....C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  K  N  G  N  T  N  Y  A  Q 
                    Query_6963   92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTAAAAATGGAAACACAAATTACGCACAG  181
V  93.1% (269/289)  IGHV1-18*01  97   ........C....................................................C.T.C.....T........C..T......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  V  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  F  D  D  T  A 
                    Query_6963   182  AAGGTCCAGGGAAGAGTCACCATGACGACAGACACATCCACGAGTACAGCCTACATGGAGCTGCGGAGCCTGAGATTTGACGACACGGCC  271
V  93.1% (269/289)  IGHV1-18*01  187  ...C.......C..............C.................C..................A............C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       L  Y  F  C  A  R  G  H  H  T  P  G  L  R  S  F  D  W  Y  L  D  S  W  G  Q  G  T  L  V  T 
                    Query_6963   272  CTGTATTTCTGTGCGAGAGGACACCATACGCCGGGTTTACGATCTTTTGACTGGTACCTTGACTCCTGGGGCCAGGGAACCCTGGTCACC  361
V  93.1% (269/289)  IGHV1-18*01  277  G......A...........-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  94.4% (17/18)    IGHD3-9*01   4    ------------------------------------.......A..........------------------------------------  21
J  95.7% (44/46)    IGHJ4*02     3    ------------------------------------------------------...T......A.........................  38

                                                
                                       V  S  S  
                    Query_6963   362  GTCTCCTCAG  371
J  95.7% (44/46)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_218486

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     8e-121
IGHD1-26*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	GGG	GGTCTAGTGGAAGGTACTAC	CTCCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTAC	ARGGLVEGTTSFFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	280	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_6964   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCAACCTA  90
V  96.9% (280/289)  IGHV5-51*03  6    ..................................................................................A.C.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  F  G  W  V  R  Q  I  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_6964   91   CTGGTTCGGCTGGGTGCGCCAGATACCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.9% (280/289)  IGHV5-51*03  96   ....A...................G..........................G......................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6964   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (280/289)  IGHV5-51*03  186  ............................................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  A  R  G  G  L  V  E  G  T  T  S  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6964   271  CATTTATTACTGTGCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCGTC  360
V  96.9% (280/289)  IGHV5-51*03  276  ...G............A..-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  85.0% (17/20)    IGHD1-26*01  1    ----------------------...A......G..C......------------------------------------------------  20
J  97.7% (43/44)    IGHJ4*02     5    ------------------------------------------------.......................................C..  46

                                        
                                        
                    Query_6964   361  AG  362
J  97.7% (43/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_218488

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           377     1e-106
IGHD1-1*01                                                                                            14.1    9.6   
IGHJ2*01                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGCGGTTGAGAGATG	GGTACAA	TTTTCTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGCGGTTGAGAGATGGGTACAATTTTCTCGACTGGTACTTCGATGTC	ATRLRDGYNFLDWYFDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	264	23	0	92


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  L  S  C  Q  A  S  G  Y  T  F  N  N  Y
                    Query_6965   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAGACTCTCCTGTCAGGCTTCTGGATACACCTTCAACAATTA  90
V  92.0% (264/287)  IGHV5-51*01  6    ..............................A...................AGA........A...G...........G...T.C..GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_6965   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGTATCATCTATCCTGGTGACTCTGATACCACATACAGTCC  180
V  92.0% (264/287)  IGHV5-51*01  96   ...................................................G............................G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  T  S  L  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6965   181  GTCCTTCCGAGGCCAAGTCACCATCTCAGCCGACACGTCCCTCCGAACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  92.0% (264/287)  IGHV5-51*01  186  ........A......G...................A....A..A.C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        T  Y  Y  C  A  T  R  L  R  D  G  Y  N  F  L  D  W  Y  F  D  V  W  G  R  G  T  Q  V  I  V
                    Query_6965   271  CACATATTATTGTGCGACGCGGTTGAGAGATGGGTACAATTTTCTCGACTGGTACTTCGATGTCTGGGGCCGTGGCACCCAGGTCATTGT  360
V  92.0% (264/287)  IGHV5-51*01  276  ..TG.....C.......-------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                           
D  100.0% (7/7)     IGHD1-1*01   1    --------------------------------.......---------------------------------------------------  7
J  90.2% (46/51)    IGHJ2*01     3    -----------------------------------------------..............C..................T.....C...  45

                                              
                                        A  S  
                    Query_6965   361  CGCGTCAG  368
J  90.2% (46/51)    IGHJ2*01     46   .T.C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_218489

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           410     1e-116
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ2*01                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGA	TACTATGACAGTAGTGGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTC	ARDGYYDSSGYYYDL	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  S  Y  S  F  S  S  H 
                    Query_6966   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTAGTTACAGTTTTAGCAGCCAC  91
V  95.2% (276/290)  IGHV1-18*04  7    .....................................................................G......CC....C....T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  D  Y  A  R 
                    Query_6966   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGGTGGATCAGCGGTTACAATGGTAACACAGACTATGCACGG  181
V  95.2% (276/290)  IGHV1-18*04  97   ................................A.................A..........C................A.........A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  A  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  T  S  D  D  T  A 
                    Query_6966   182  AAGTTCCAGGGCAGAGTCACCATGACCGCAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGACATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*04  187  ...C.......................A.............................................G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  D  G  Y  Y  D  S  S  G  Y  Y  Y  D  L  W  G  R  G  T  L  V  T  V  S  S 
                    Query_6966   272  GTGTATTACTGTGCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTCTGGGGCCGGGGAACCCTGGTCACTGTCTCCTCA  361
V  95.2% (276/290)  IGHV1-18*04  277  ...............A....----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  95.2% (20/21)    IGHD3-22*01  5    ------------------------........T............---------------------------------------------  25
J  91.3% (42/46)    IGHJ2*01     8    ---------------------------------------------....T...T...........T..C.....................  52

                                       
                                       
                    Query_6966   362  G  362
J  91.3% (42/46)    IGHJ2*01     53   .  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_348135

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            318     6e-89
IGHD4-17*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GAAACGGGCCAGG	GACTACAGTGACT	TCGGAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGAAACGGGCCAGGGACTACAGTGACTTCGGAGTTTGACTCC	AKGNGPGTTVTSEFDS	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_6967   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCAGGATTCACGTTTGATGACTATGCCATGCACTGGGTCCGGCAACCTCCCGGGAAGGGCCTGG  90
V  90.8% (226/249)  IGHV3-9*01   47   .....................C......T........C........T........................G....A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  W  N  S  D  Q  R  V  H  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  A  
                    Query_6967   91   AGTGGGTCTCAAGTATTAGTTGGAATAGTGATCAGAGAGTCCATGCCGACTCTGTGCAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.8% (226/249)  IGHV3-9*01   137  ...........G..................G.AGC.T..G.T....G.........A.................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  S  L  H  L  Q  M  N  S  L  R  V  E  D  T  A  F  Y  Y  C  A  K  G  N  G  P  G  T  T  
                    Query_6967   181  GGAACTCCCTGCATTTGCAAATGAATAGTCTGAGAGTTGAAGACACGGCCTTCTATTACTGTGCAAAAGGAAACGGGCCAGGGACTACAG  270
V  90.8% (226/249)  IGHV3-9*01   227  A..........T..C..........C..........C...G...........G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  92.3% (12/13)    IGHD4-17*01  2    ----------------------------------------------------------------------------------......G.  9

                                      T------------------>                                  
                                      V  T  S  E  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6967   271  TGACTTCGGAGTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  324
D  92.3% (12/13)    IGHD4-17*01  10   .....-------------------------------------------------  14
J  95.3% (41/43)    IGHJ4*02     6    -----------.......A..............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_228521

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         297     7e-83
IGHD3-9*01                                                                                            14.1    8.7  
IGHJ2*01                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGACCGATAC	TGACTGG	GGTGGTCACACAGGGCTCTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACCGATACTGACTGGGGTGGTCACACAGGGCTCTTCTGGTACTTCGATCTC	AKTDTDWGGHTGLFWYFDL	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	13	8	0	61.9
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	217	27	0	88.9


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  V  V  S  G  Y  S  I  N  N  G  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  L 
                    Query_6968     1    ACCCTGTCCCTCACCTGCGTTGTGTCTGGTTACTCCATCAACAATGGTTACTACTGGGGCTGGCTCCGGCAGCCCCCAGGAAAGGGGCTG  90
V  88.9% (217/244)  IGHV4-38-2*01  49   ...................C...C................G..G...................A................G.........  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  V  Y  H  R  E  D  A  Y  Y  N  P  S  L  K  S  R  V  T  V  S  M  D  T  S  S 
                    Query_6968     91   GAGTGGATTGGGAGTGTCTATCATCGCGAGGACGCGTACTACAATCCGTCCCTCAAGAGTCGAGTCACCGTCTCAATGGACACGTCCAGT  180
V  88.9% (217/244)  IGHV4-38-2*01  139  ...............A........A.T.G.AG.A.C........C........................A.A...G.A..........AG  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                         N  Q  V  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  T  D  T  D  W  G  G  H 
                    Query_6968     181  AATCAGGTCTCCCTGAGCCTGAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAAGACCGATACTGACTGGGGTGGTCAC  270
V  88.9% (217/244)  IGHV4-38-2*01  229  ..C...T.........AG.....C...............................A........--------------------------  292
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-9*01     15   --------------------------------------------------------------------------.......---------  21

                                        MGT----------------------->                                  
                                         T  G  L  F  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6968     271  ACAGGGCTCTTCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  331
J  100.0% (50/50)   IGHJ2*01       4    -----------..................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_207166

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           438     5e-125
IGHD3-16*01                                                                                           12.2    36    
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTTGAGG	GATTAC	CAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTAC	TRSLRDYQPFYFDY	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	71	0	0	100
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	112	2	0	98.2
CDR3-IMGT (germline)	292	297	6	5	1	0	83.3
Total	N/A	N/A	290	285	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  
                    Query_6969   8    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACT  97
V  98.3% (285/290)  IGHV5-51*03  5    ..............................................................................G........G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  
                    Query_6969   98   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCC  187
V  98.3% (285/290)  IGHV5-51*03  95   ..........................................................................................  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_6969   188  CGTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACTG  277
V  98.3% (285/290)  IGHV5-51*03  185  .......................A................................................................C.  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                  
                                      A  M  Y  Y  C  T  R  S  L  R  D  Y  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_6969   278  CCATGTATTACTGTACGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  367
V  98.3% (285/290)  IGHV5-51*03  275  ..............G.....----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  8    -----------------------------......-------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    -------------------------------------------....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_207165

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            372     2e-105
IGHD3-3*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCAG	CG	ACGATTTTTTGAGTGCTTATT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGCAGCGACGATTTTTTGAGTGCTTATTACTACTTTGATTAC	ARSDDFLSAYYYFDY	260	304	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	45	1	0	97.8
CDR1-IMGT	47	73	30	27	0	3	90
FR2-IMGT	74	124	51	50	1	0	98
CDR2-IMGT	125	145	21	21	0	0	100
FR3-IMGT	146	259	114	106	8	0	93
CDR3-IMGT (germline)	260	267	8	7	1	0	87.5
Total	N/A	N/A	270	256	11	3	94.8


Alignments

                                     <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S     S  G  V  G  V  G  W  I  R
                    Query_6970  1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCAG---TAGTGGAGTGGGTGTGGGCTGGATCCG  87
V  94.8% (256/270)  IGHV2-5*01  30   ...........................G................................CAC...........................  119
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                     -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  H  Y  S  P  S  L  E  S  R  L  S
                    Query_6970  88   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCTCTCATTTATTGGAATGATGATAAGCACTACAGCCCATCTCTGGAGAGCAGGCTCTC  177
V  94.8% (256/270)  IGHV2-5*01  120  .................................A.........................G................A...........A.  209
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                     ---------------------FR3-IMGT----------------------------------------------------><-------
                                       I  T  K  G  T  S  K  N  Q  V  V  L  T  M  T  K  M  G  P  V  D  T  S  T  Y  Y  C  A  R  S
                    Query_6970  178  CATCACCAAGGGCACCTCCAAAAACCAGGTGGTCCTTACAATGACCAAGATGGGCCCTGTGGACACATCCACATATTACTGCGCACGCAG  267
V  94.8% (256/270)  IGHV2-5*01  210  ...........A....................................C....A.............G.............T....A...  299
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                     ----------CDR3-IMGT----------------->                                  
                                       D  D  F  L  S  A  Y  Y  Y  F  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_6970  268  CGACGATTTTTTGAGTGCTTATTACTACTTTGATTACTGGGGCCAGGGGACCCAGGTCACCGTCTCCTCAG  338
D  90.5% (19/21)    IGHD3-3*01  6    --.........G.....G.....------------------------------------------------  26
J  93.8% (45/48)    IGHJ4*02    1    -----------------------..........C..............A....T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_207164

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           290     2e-80
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	TCTACAGTGCGGGGCGC	TGGCTGGT	GGCCGGTTGGGTACAT	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	48	3	0	94.1
CDR2-IMGT	92	115	24	19	5	0	79.2
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	235	6	5	1	0	83.3
Total	N/A	N/A	223	204	19	0	91.5


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  T  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  H  I  Y  Y  D
                    Query_6971   13   GTCTGGATTCACCTTCAGTACCTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGGAGTGGGTGGCACATATTTACTATGA  102
V  91.5% (204/223)  IGHV3-33*01  72   ....................G..A....................................G...............GT...A.GG.....  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  T  N  K  Y  Y  A  D  S  M  K  G  R  F  T  I  S  R  D  N  S  R  D  T  L  Y  L  Q  M  N
                    Query_6971   103  TGGAACTAATAAGTATTATGCAGACTCCATGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGGATACCCTGTATCTGCAAATGAA  192
V  91.5% (204/223)  IGHV3-33*01  162  .....G......A..C............G....................................A.A.C..G.................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------>                                                     
                                        S  L  R  V  E  D  T  A  M  Y  Y  C  V  R  S  T  V  R  G  A  G  W  W  P  V  G  Y  M  G  Q
                    Query_6971   193  CAGCCTGAGAGTCGAGGACACGGCTATGTATTACTGTGTGAGATCTACAGTGCGGGGCGCTGGCTGGTGGCCGGTTGGGTACATGGGCCA  282
V  91.5% (204/223)  IGHV3-33*01  252  ...........C.............G............C....-----------------------------------------------  294
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (8/8)     IGHD6-19*01  12   ------------------------------------------------------------........----------------------  19
J  100.0% (27/27)   IGHJ4*02     17   ------------------------------------------------------------------------------------......  22

                                                           
                                        G  T  L  V  T  V  S
                    Query_6971   283  GGGAACCCTGGTCACCGTCTC  303
J  100.0% (27/27)   IGHJ4*02     23   .....................  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_207162

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           363     2e-102
IGHD1-26*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GA	GGTGTAGTGGG	GGCCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTAGTGGGGGCCCCCTTTGACTAC	ARGGVVGAPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	261	29	0	90


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  T  A  G  G  S  F  S  S  Y
                    Query_6972   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGACCGCTGGAGGTAGTTTCAGCAGCTA  90
V  90.0% (261/290)  IGHV1-69*06  6    ..............................................................A.G.TT.......C.CC...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  M  R  Q  A  P  G  Q  G  L  E  W  M  G  A  I  M  P  L  Y  G  I  G  N  Y  A  Q
                    Query_6972   91   TGCTATCAGTTGGATGCGACAGGCCCCTGGGCAAGGGCTTGAGTGGATGGGAGCAATCATGCCTCTATATGGCATAGGAAACTACGCACA  180
V  90.0% (261/290)  IGHV1-69*06  96   .........C...G................A......................GG.....C...A.C.T...T.C..C............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  K  V  T  I  T  A  D  T  S  T  R  T  A  Y  M  E  L  S  G  L  R  S  A  D  P  A
                    Query_6972   181  GAAGTTCCAGGGCAAAGTCACGATTACCGCGGACACATCCACGAGGACAGCCTACATGGAGTTGAGTGGCCTGAGATCTGCGGACCCGGC  270
V  90.0% (261/290)  IGHV1-69*06  186  ..............G....................A.........C...............C....CA............A....A....  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  G  G  V  V  G  A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_6972   271  CATGTATTATTGTGCGAGAGGAGGTGTAGTGGGGGCCCCCTTTGACTACTGGGGCCAGGGAACTCTGGTCACCGTCTCCCCAG  353
V  90.0% (261/290)  IGHV1-69*06  276  .G.......C..........---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  90.9% (10/11)    IGHD1-26*01  1    ----------------------...A.......--------------------------------------------------  11
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------------........................C...............T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_278138

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           394     6e-112
IGHD3-16*01                                                                                           12.2    33    
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTTTCC	TGGGGG	N/A	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTCCTGGGGGTGCTTATGATATC	ARHFPGGAYDI	261	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	22	2	0	91.7
FR2-IMGT	75	125	51	50	1	0	98
CDR2-IMGT	126	146	21	20	1	0	95.2
FR3-IMGT	147	260	114	111	3	0	97.4
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	260	8	0	97


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  F  C  S  W  I  R  
                    Query_6973   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTTCTGCAGCTGGATCCGGC  90
V  97.0% (260/268)  IGHV4-59*08  26   ................T.....................................G.................A...G.............  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_6973   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTCTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  97.0% (260/268)  IGHV4-59*08  116  .......................................A..................................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  H  
                    Query_6973   181  TATCAGTTGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGACCTCTGTGTCCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATT  270
V  97.0% (260/268)  IGHV4-59*08  206  .......A..................................G.......A.....................................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      --CDR3-IMGT----------->                                  
                                      F  P  G  G  A  Y  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6973   271  TTCCTGGGGGTGCTTATGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  327
D  100.0% (6/6)     IGHD3-16*01  17   ----......-----------------------------------------------  22
J  97.9% (46/47)    IGHJ3*02     4    ----------.....T.........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_207160

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           266     2e-73
IGHD3-3*01                                                                                            18.0    0.57 
IGHJ4*01                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGCA	N/A	TTATTATAC	GGGGACCTATCCAC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATTATTATACGGGGACCTATCCACTTGACCAC	ARHYYTGTYPLDH	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	10	11	0	47.6
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	207	37	0	84.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  G  Y  S  W  S  W  I  R  Q  F  P  G  K  G  L  E  
                    Query_6974   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCATCAGTGGTTACTCCTGGAGTTGGATCCGGCAGTTCCCAGGGAAGGGACTGGAGT  93
V  84.8% (207/244)  IGHV4-59*08  50   .....TCC...A....C.............G..........A......A......C............CC....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  R  A  H  D  M  K  T  N  Y  N  P  S  L  K  N  R  L  T  I  S  V  D  T  S  R  S  
                    Query_6974   94   GGATTGGATATAGGGCTCACGATATGAAGACCAACTACAACCCCTCCCTCAAGAATCGACTCACCATATCAGTGGACACGTCCAGGAGCC  183
V  84.8% (207/244)  IGHV4-59*08  140  .......G....TCTA.T..AG.GG..GC.........................G....G.............A..........A..A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  V  A  L  E  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  H  Y  Y  T  G  T  Y  P  L  
                    Query_6974   184  AGGTCGCCCTGGAGTTGACCTCTGTGACCGCCGCAGACACGGCCATATATTATTGTGCGAGGCATTATTATACGGGGACCTATCCACTTG  273
V  84.8% (207/244)  IGHV4-59*08  230  ..T..T.....A..C...G.........................G.G.....C........A..--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (9/9)     IGHD3-3*01   22   ----------------------------------------------------------------.........-----------------  30
J  92.5% (37/40)    IGHJ4*01     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                
                                      D  H  W  G  H  G  I  L  V  T  V  S  S
                    Query_6974   274  ACCACTGGGGCCACGGAATCCTGGTCACCGTCTCCTC  310
J  92.5% (37/40)    IGHJ4*01     10   ..T..........A....C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_278136

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           336     1e-94
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	ATTTAGAATATCAGTTTTCACGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATTTAGAATATCAGTTTTCACGTACTACTTTGACTAC	AREFRISVFTYYFDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	230	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  R  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6975   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGAAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.9% (230/245)  IGHV4-59*01  49   ...................C.....................T....A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  M  Y  Y  S  G  T  P  N  Y  N  P  S  L  E  S  R  L  T  I  S  L  D  T  S  K  N 
                    Query_6975   91   TGGGTTGGGTACATGTACTACAGTGGGACCCCCAACTATAACCCCTCCCTCGAGAGTCGACTCACCATATCACTAGACACGTCCAAGAAC  180
V  93.9% (230/245)  IGHV4-59*01  139  ...A.......T..C..T..........G.A.......C............A........G...........G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  F  R  I  S  V  F  T  Y 
                    Query_6975   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGAATTTAGAATATCAGTTTTCACGTAC  270
V  93.9% (230/245)  IGHV4-59*01  229  ...............................................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  100.0% (46/46)   IGHJ4*02     1    ----------------------------------------------------------------------------------------..  2

                                      ----------->                                
                                       Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_6975   271  TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
J  100.0% (46/46)   IGHJ4*02     3    ............................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_278134

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD2-21*02                                                                                           10.3    116  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GG	GACTG	ACCCACTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGACTGACCCACTCCTACTTTGAGTCC	ARGLTHSYFES	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	226	15	0	93.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  S  G  S  I  N  N  Y  Y  W  N  W  I  R  H  P  P  G  K  G  L  E  
                    Query_6976   4    CCCTGAGACTCTCCTGCACTGTCTCTAGTGGCTCCATCAATAATTACTACTGGAACTGGATCCGGCACCCCCCAGGGAAGGGACTGGAGT  93
V  93.8% (226/241)  IGHV4-59*01  50   .....TCC...A..............G............G..G...........G............G......................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  V  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  R  N  
                    Query_6976   94   GGATTGGGTACGTCTATTACAGCGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAGGAACC  183
V  93.8% (226/241)  IGHV4-59*01  140  ..........TA..........T....G........................................................A.....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  K  L  S  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  G  L  T  H  S  Y  F  E  S  
                    Query_6976   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCTCTGCGGACACGGCCGTGTATTACTGTGCGAGGGGACTGACCCACTCCTACTTTGAGTCCT  273
V  93.8% (226/241)  IGHV4-59*01  230  .............................G...............................-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (5/5)     IGHD2-21*02  17   ---------------------------------------------------------------.....----------------------  21
J  95.7% (45/47)    IGHJ4*02     2    ----------------------------------------------------------------------------.........C.A..  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6976   274  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  95.7% (45/47)    IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_278135

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATACCTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATACCTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYTFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_6977   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AGT.A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S 
                    Query_6977   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T.A....A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  T  F 
                    Query_6977   181  CAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATACCTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ..............G.....C..................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6977   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_278132

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            343     2e-96
IGHD6-6*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGTCGA	ATACCAGCTCGTCC	ACGAGGAAAGTCGG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGTCGAATACCAGCTCGTCCACGAGGAAAGTCGGACTTTGACTAC	ARSRIPARPRGKSDFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  G  V  S  G  G  S  I  S  S  D  N  W  W  G  W  V  R  Q  P  P  G  K  G  L 
                    Query_6978  1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGTGGCTCCATCAGCAGTGATAACTGGTGGGGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  94.7% (232/245)  IGHV4-4*02  49   ...................C.........................AG..........A................................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  H  H  T  G  S  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_6978  91   GAGTGGATTGGGGAGATCCATCATACTGGGAGCACCAGCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTCGACAAGTCCAAG  180
V  94.7% (232/245)  IGHV4-4*02  139  ..............A...T......G...........A.......................................A............  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                      N  Q  F  S  L  N  L  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  S  R  I  P  A  R  P  R 
                    Query_6978  181  AACCAGTTCTCCCTGAACCTGACGTCTGTGACCGCCGCGGACACGGCCATGTATTACTGTGCGAGGAGTCGAATACCAGCTCGTCCACGA  270
V  94.7% (232/245)  IGHV4-4*02  229  .................G....GC........................G................-------------------------  293
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  92.9% (13/14)    IGHD6-6*01  5    ------------------------------------------------------------------------...G..........----  18

                                     -------------------->                                  
                                      G  K  S  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6978  271  GGAAAGTCGGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (45/45)   IGHJ4*02    4    ----------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_278133

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           360     1e-101
IGHD3-16*02                                                                                           35.3    4e-06 
IGHJ5*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGTGACC	ATGATGACGTTTGGGGGATTTGTCGTT	N/A	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGTGACCATGATGACGTTTGGGGGATTTGTCGTTCC	ARVGDHDDVWGICRS	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  I  Y  Y  W  S  W  I  R  Q  P  P  G  K  R 
                    Query_6979   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTATTTACTACTGGAGCTGGATCCGACAGCCCCCAGGGAAGAGA  90
V  96.0% (240/250)  IGHV4-61*01  49   .................................................G.....................G...............G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  M  Y  Y  S  G  S  P  K  Y  N  P  S  L  K  S  R  A  T  I  S  L  H  T  S 
                    Query_6979   91   CTGGAGTGGATTGGGTATATGTATTACAGTGGGAGCCCCAAGTACAACCCCTCCCTCAAGAGTCGAGCCACCATATCATTACACACGTCC  180
V  96.0% (240/250)  IGHV4-61*01  139  ....................C...............A....C.........................T..........G..G........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  V  G  D  H  D  D  V 
                    Query_6979   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGAGCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTAGGTGACCATGATGACGTT  270
V  96.0% (240/250)  IGHV4-61*01  229  ..................................C...................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (24/27)    IGHD3-16*02  6    -------------------------------------------------------------------------------.....T.....  16

                                      ----------------->                                  
                                       W  G  I  C  R  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6979   271  TGGGGGATTTGTCGTTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  88.9% (24/27)    IGHD3-16*02  17   .......G..A.....------------------------------------  32
J  100.0% (36/36)   IGHJ5*02     16   ----------------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_278130

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           305     3e-85
IGHD1-26*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TTCCCGTCATC	AGTGGGAGC	CGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTCCCGTCATCAGTGGGAGCCGCGACTAC	AKLPVISGSRDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	219	24	0	90.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  N  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_6980   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAATTCCTACTGGAGTTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAGT  93
V  90.1% (219/243)  IGHV4-59*08  50   .....TCC...A..............................G..A.........C.................A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  S  S  G  S  T  N  Y  T  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K  
                    Query_6980   94   GGATCGGATATATCTATTCTAGTGGGAGCACCAATTACACCCCCTCCCTCAAGAGTCGCGTCACCATCTCGGTAGACACGTCCAAGAAGC  183
V  90.1% (219/243)  IGHV4-59*08  140  ....T..G..........AC..............C....A..................A........A..A.................C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  K  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  K  L  P  V  I  S  G  S  R  D  
                    Query_6980   184  AGTTCTCCCTGAAACTGAATTCTGTGACCGCCGCAGACTCGGCCGTCTATTACTGTGCGAAACTTCCCGTCATCAGTGGGAGCCGCGACT  273
V  90.1% (219/243)  IGHV4-59*08  230  .............G....GC..................A.......G.............G..---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (9/9)     IGHD1-26*01  6    --------------------------------------------------------------------------.........-------  14
J  97.5% (39/40)    IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_6980   274  ACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  309
J  97.5% (39/40)    IGHJ4*02     13   .............................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_278131

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_6981   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AGT.A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S 
                    Query_6981   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T.A....A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_6981   181  CAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ..............G.....C..................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6981   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_173132

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           380     1e-107
IGHD2-15*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGT	GTGGTGGGAGC	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTGGTGGGAGCCCCCTTTGACTCC	ARGGVVGAPFDS	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	69	2	0	97.2
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	18	6	0	75
FR3-IMGT	177	290	114	102	12	0	89.5
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  T  S  G  G  S  F  T  S  
                    Query_6982   7    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACTTCTGGAGGCAGTTTCACCAGCT  96
V  91.8% (267/291)  IGHV1-69*06  5    ...................G.............................................G............CC....G.....  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  M  P  L  F  D  I  A  N  Y  R  
                    Query_6982   97   ATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGAATCATGCCTCTGTTTGACATAGCAAACTACAGAC  186
V  91.8% (267/291)  IGHV1-69*06  95   .......................................................G.....C...A.C....GT.C..........GC..  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  K  F  T  R  T  A  Y  M  E  L  N  S  L  R  S  G  D  T  
                    Query_6982   187  AGAAGTTCCAGGGCAGAGTCACCATTACCGCGGACAAGTTCACGAGGACAGCCTACATGGAGTTGAATAGCCTGAGATCTGGGGACACGG  276
V  91.8% (267/291)  IGHV1-69*06  185  ......................G..............A.C......C...............C...GC.............A........  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-------------CDR3-IMGT------------>                                  
                                      A  I  Y  Y  C  A  R  G  G  V  V  G  A  P  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6982   277  CCATTTATTACTGTGCGAGAGGAGGTGTGGTGGGAGCCCCCTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  91.8% (267/291)  IGHV1-69*06  275  ..G.G................---------------------------------------------------------------  295
                                      A  V  Y  Y  C  A  R                                                                 
D  90.9% (10/11)    IGHD2-15*01  12   --------------------------.......T...-----------------------------------------------  22
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_173133

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           355     3e-100
IGHD4-17*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CCCCCGA	TGACGACGGTGACTAC	CGCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCCCCCGATGACGACGGTGACTACCGCCCTTTTGACAAC	AKAPDDDGDYRPFDN	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6983   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCGGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-23*01  47   ............................................A.............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  R  S  S  G  D  S  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6983   91   AGTGGGTCTCAGGTATTAGAAGTAGTGGTGATAGCACATATTATACAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.6% (238/249)  IGHV3-23*01  137  ............C......TG.........G.........C..CG.............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  A  P  D  D  D  G  D  
                    Query_6983   181  AGAACTCGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATACTACTGTGCGAAAGCCCCCGATGACGACGGTGACT  270
V  95.6% (238/249)  IGHV3-23*01  227  .....A............................................G....T.............---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD4-17*01  1    ----------------------------------------------------------------------------....T.........  14

                                      ---------------->                                  
                                      Y  R  P  F  D  N  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_6983   271  ACCGCCCTTTTGACAACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  321
D  93.8% (15/16)    IGHD4-17*01  15   ..-------------------------------------------------  16
J  95.3% (41/43)    IGHJ4*02     6    --------......T..................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_173130

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           374     8e-106
IGHD3-3*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTAAA	ACGATTTTTGGAGTGGTTAT	CCATTTGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTAAAACGATTTTTGGAGTGGTTATCCATTTGGGCTACTTTGACTAC	AKVKTIFGVVIHLGYFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	244	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_6984   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (244/249)  IGHV3-23*01  47   .....................C....................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  D  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_6984   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGATAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  98.0% (244/249)  IGHV3-23*01  137  ..............................G...........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  D  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  V  K  T  I  F  G  V  
                    Query_6984   181  AGGACACCCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTTAAAACGATTTTTGGAGTGG  270
V  98.0% (244/249)  IGHV3-23*01  227  ..A....G....A........................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (20/20)   IGHD3-3*01   6    --------------------------------------------------------------------------................  21

                                      IMGT--------------------->                                  
                                      V  I  H  L  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6984   271  TTATCCATTTGGGCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (20/20)   IGHD3-3*01   22   ....--------------------------------------------------------  25
J  100.0% (47/47)   IGHJ4*02     2    -------------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_173131

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           372     2e-105
IGHD1-1*01                                                                                            12.2    33    
IGHJ5*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	CCCGACATATGTCCTCGAG	GGAACG	GAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGACCCGACATATGTCCTCGAGGGAACGGATTGGTTCGACCCC	TTDPTYVLEGTDWFDP	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	247	9	0	96.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  G  P  G  K  G  L  
                    Query_6985   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGGTCCAGGGAAGGGGCTGG  90
V  96.5% (247/256)  IGHV3-15*01  47   .......T................................................................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  T  D  G  E  T  K  E  Y  A  A  P  V  K  G  R  F  A  I  S  R  D  
                    Query_6985   91   AGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGAGACAAAAGAGTACGCTGCACCCGTGAAAGGCAGATTCGCCATCTCAAGAGATG  180
V  96.5% (247/256)  IGHV3-15*01  137  ....................................G.....C...C...........................A...............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  F  C  T  T  D  P  T  Y  V  
                    Query_6985   181  ATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTCAAATCCGAGGACACAGCCGTGTATTTCTGTACCACAGACCCGACATATGTCC  270
V  96.5% (247/256)  IGHV3-15*01  227  .....................................G...A.....................A............--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 

                                      R3-IMGT------------------>                                  
                                      L  E  G  T  D  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6985   271  TCGAGGGAACGGATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (6/6)     IGHD1-1*01   10   -----......-------------------------------------------------  15
J  100.0% (46/46)   IGHJ5*02     6    --------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_173136

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           382     3e-108
IGHD1-1*01                                                                                            10.3    116   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TA	GAACG	GCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATAGAACGGCATTTGACTAC	TRDRTAFDY	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	30	0	0	100
FR3-IMGT	135	248	114	112	2	0	98.2
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	250	6	0	97.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  G  D  Y  G  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_6986   1    GGTCCCTGAGACTCTCCTGTTCAGCTTCTGGATTCACCTTTGGTGATTATGGTCTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.7% (250/256)  IGHV3-49*04  47   ....................A..............................C.A...G................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  G  
                    Query_6986   91   AGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGGTG  180
V  97.7% (250/256)  IGHV3-49*04  137  .......................................................................................A..  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  T  R  D  R  T  A  F  
                    Query_6986   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAAGCGAGGACACAGCCGTGTATTACTGTACTAGAGATAGAACGGCATTTG  270
V  97.7% (250/256)  IGHV3-49*04  227  ..........................................C.................................--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (5/5)     IGHD1-1*01   11   ------------------------------------------------------------------------------.....-------  15
J  100.0% (43/43)   IGHJ4*02     6    --------------------------------------------------------------------------------------....  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6986   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (43/43)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_173137

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD6-13*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	ARHRYLGPRQQATENDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  Q  G  S  G  Y  T  F  T  T  Y
                    Query_6987   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTACCACCTA  90
V  95.9% (279/291)  IGHV5-51*01  6    ..........................................G..................A...............G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  P  R  Y  S  S
                    Query_6987   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAGTCATCTATCCTGGTGACTCTGATCCCAGATACAGCTC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G..........................................GA.......................A...........C.  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_6987   181  GTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  ......................A................................C..........C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_6987   271  CATGTATTACTGTGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  95.9% (279/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-13*01  8    ---------------------------------------.......--------------------------------------------  14
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_6987   361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_173134

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*04                                                                                           296     2e-82
IGHD2-21*01                                                                                           10.3    124  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*04	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATAAAGACCCCGGAGGGCGC	CTATT	TCTCG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATAAAGACCCCGGAGGGCGCCTATTTCTCGTACTACGGTATGGACGTC	ARIKTPEGAYFSYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	218	29	0	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  I  A  S  G  F  T  F  S  D  F  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6988   1    GGTCCCTGAGACTCTCCTGTATAGCCTCTGGATTCACCTTCAGTGATTTTACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGC  90
V  88.3% (218/247)  IGHV3-21*04  47   ....................GC......................AGC.A..G.................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  S  S  G  T  Y  T  Y  Y  A  D  S  L  Q  G  R  F  T  I  A  R  D  N  A  
                    Query_6988   91   AGTGGGTGTCATCCATTAGTAGTAGTGGGACTTACACATACTACGCAGACTCACTTCAGGGCCGATTCACCATCGCCAGAGACAACGCCA  180
V  88.3% (218/247)  IGHV3-21*04  137  .......C..................A.T.G.....T................G.GA.................T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  R  S  L  Y  L  Q  V  N  S  L  R  T  E  D  T  G  I  Y  Y  C  A  R  I  K  T  P  E  G  A  
                    Query_6988   181  AGAGGTCTCTGTATCTCCAAGTGAACAGCCTGAGAACCGAGGACACCGGCATATATTATTGTGCGAGGATAAAGACCCCGGAGGGCGCCT  270
V  88.3% (218/247)  IGHV3-21*04  227  ...AC..A........G...A..............G..........G.C.G.G.....C........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  22   ----------------------------------------------------------------------------------------..  23

                                      IMGT--------------------->                              
                                      Y  F  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_6988   271  ATTTCTCGTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  326
D  100.0% (5/5)     IGHD2-21*01  24   ...-----------------------------------------------------  26
J  100.0% (48/48)   IGHJ6*02     12   --------................................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_145044

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            339     2e-95
IGHD3-22*01                                                                                           21.8    0.041
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GTATTACTTTGAGAATAGTG	CCAGCACGTTCGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTATTACTTTGAGAATAGTGCCAGCACGTTCGGTGCTTTTGATATC	ARYYFENSASTFGAFDI	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  G  V  S  G  G  S  I  S  S  D  N  W  W  G  W  V  R  Q  P  P  G  K  G  L 
                    Query_6989   1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGTGGCTCCATCAGCAGTGATAACTGGTGGGGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  94.3% (231/245)  IGHV4-4*02   49   ...................C.........................AG..........A................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  T  G  S  T  S  Y  N  P  S  L  K  S  R  L  I  I  S  V  D  T  S  K 
                    Query_6989   91   GAGTGGATTGGGGAGATCTATCATACTGGGAGCACCAGCTACAACCCGTCCCTCAAGAGTCGACTCATCATATCAGTAGACACGTCCAAG  180
V  94.3% (231/245)  IGHV4-4*02   139  ..............A..........G...........A.........................G...C..............A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  Y  Y  F  E  N  S  A  S 
                    Query_6989   181  AACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCCTATATTACTGTGCGAGGTATTACTTTGAGAATAGTGCCAGC  270
V  94.3% (231/245)  IGHV4-4*02   229  ......................G...............G.........G.G..............-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  85.0% (17/20)    IGHD3-22*01  1    -----------------------------------------------------------------........A...T.G.....-----  20

                                      -------------------->                                  
                                       T  F  G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_6989   271  ACGTTCGGTGCTTTTGATATCTGGGGCCAAGGCACAATGGTCACCGTCTCTTCAG  325
J  97.9% (46/47)    IGHJ3*02     4    --------........................G......................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_125179

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           344     6e-97
IGHD2-2*01                                                                                            35.3    4e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	ATTGTACTAGTACCAGGTGCTATG	GGGGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGACATTGTACTAGTACCAGGTGCTATGGGGGATTTGACTTC	TRHCTSTRCYGGFDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  S  L  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_6990   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCAGCCTCAGTAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  94.4% (234/248)  IGHV3-64*01  47   .....................C..............C.T.......C......................................A....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  S  D  G  G  T  T  Y  Y  A  N  S  V  K  G  R  F  A  I  S  R  D  N  S  
                    Query_6990   91   AATATGTTTCAGCTATTAGTAGTGATGGGGGTACCACATATTATGCAAACTCTGTGAAGGGCAGATTCGCCATCTCCAGAGACAACTCCA  180
V  94.4% (234/248)  IGHV3-64*01  137  .......................A.........G..................................A................T....  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  F  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  T  R  H  C  T  S  T  R  C  
                    Query_6990   181  AGAACACGCTGTTCCTTCAAATGGGAAGCCTGAGAGCTGAGGACATGGCTGTCTATTACTGTACGAGACATTGTACTAGTACCAGGTGCT  270
V  94.4% (234/248)  IGHV3-64*01  227  ............AT...........C..........................G.........G.....----------------------  294
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  91.7% (22/24)    IGHD2-2*01   6    ---------------------------------------------------------------------......G.........C....  26

                                      ---------------->                                  
                                      Y  G  G  F  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_6990   271  ATGGGGGATTTGACTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  321
D  91.7% (22/24)    IGHD2-2*01   27   ...------------------------------------------------  29
J  95.3% (41/43)    IGHJ4*02     6    --------.......A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_125178

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     3e-91
IGHD4-17*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTGCGC	TGACTAAGGTG	GGCTGGAGATTCG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGCGCTGACTAAGGTGGGCTGGAGATTCGGGTTCTTCGATCTC	ATALTKVGWRFGFFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  R  L  
                    Query_6991   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTTAGCAACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGAGGCTGG  90
V  92.3% (227/246)  IGHV3-23*01  47   ........................C....................G...........G.........................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  A  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  S  
                    Query_6991   91   AGTGGGTCTCAAGTATCAGTGCCAGTGGTGGTAGTACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACACATCCA  180
V  92.3% (227/246)  IGHV3-23*01  137  ...........GC...T....GT...........C.................................................AT....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  Y  T  L  Y  L  E  M  N  S  L  R  V  A  D  T  A  V  Y  Y  C  A  T  A  L  T  K  V  G  W  
                    Query_6991   181  AGTACACACTGTATCTAGAAATGAACAGCCTGAGAGTCGCGGACACGGCCGTCTATTACTGTGCGACTGCGCTGACTAAGGTGGGCTGGA  270
V  92.3% (227/246)  IGHV3-23*01  227  ..A....G........GC..................C..A............A.............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.9% (10/11)    IGHD4-17*01  1    ------------------------------------------------------------------------......C....-------  11

                                      T------------------>                                  
                                      R  F  G  F  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_6991   271  GATTCGGGTTCTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
J  97.9% (47/48)    IGHJ2*01     6    ------...A............................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_173138

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           350     8e-99
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAA	TACGGTTTTTGGAGTGGTTA	ACCA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCAATACGGTTTTTGGAGTGGTTAACCATGACTAC	ASNTVFGVVNHDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	233	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  Y  S  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_6992   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTACAGTGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  96.3% (233/242)  IGHV4-34*01  49   .....................................T.....G..............................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  Y  G  R  T  N  F  N  P  S  L  E  S  R  V  T  I  L  V  D  T  T  K  N 
                    Query_6992   91   TGGATTGGGGAAATCAATCATTATGGAAGAACCAACTTCAACCCGTCCCTCGAGAGTCGAGTCACCATATTAGTAGACACGACCAAGAAC  180
V  96.3% (233/242)  IGHV4-34*01  139  .....................AG......C.......A.............A..................C..........T........  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  N  T  V  F  G  V  V  N  H 
                    Query_6992   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGCAATACGGTTTTTGGAGTGGTTAACCAT  270
V  96.3% (233/242)  IGHV4-34*01  229  ..............................................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.0% (19/20)    IGHD3-3*01   5    -----------------------------------------------------------------....A...............-----  24
J  100.0% (41/41)   IGHJ4*02     8    -----------------------------------------------------------------------------------------.  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6992   271  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (41/41)   IGHJ4*02     9    ........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_145048

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            318     6e-89
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ5*01                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAGGGGG	AGCAGTGGCTGGTAC	ACGGGCCCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGGGGGAGCAGTGGCTGGTACACGGGCCCCTTCGACTCC	ARVRGSSGWYTGPFDS	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  A  G  S  I  T  S  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_6993   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGCTGGCTCCATCACTAGTAATAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.1% (225/247)  IGHV4-4*02   49   ............................G...........GC....G...C.......................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  A  N  Y  Q  P  S  L  W  S  R  V  T  I  S  L  D  R  S  K 
                    Query_6993   91   GAGTGGATTGGAGAAATCTATCATAGTGGGAGCGCCAACTATCAGCCGTCCCTCTGGAGCCGAGTCACCATATCACTAGACAGGTCCAAG  180
V  91.1% (225/247)  IGHV4-4*02   139  ...........G.....................A.......CA.C.........AA...T...............G......A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  Q  F  S  M  D  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  G  S  S  G  W  Y 
                    Query_6993   181  AACCAGTTCTCCATGGACTTGAACTCAGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGAGAGTAAGGGGGAGCAGTGGCTGGTAC  270
V  91.1% (225/247)  IGHV4-4*02   229  ............C..A.GC...G...T.......................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (15/15)   IGHD6-19*01  7    ---------------------------------------------------------------------------...............  21

                                      ----------------->                                  
                                       T  G  P  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_6993   271  ACGGGCCCCTTCGACTCCTGGGGCCAGGGAATCCTGGTCACCGTCTCGTCAG  322
J  93.0% (40/43)    IGHJ5*01     9    ---------.................A....C...............C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_141299

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            374     8e-106
IGHD3-22*01                                                                                           39.1    3e-07 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	CG	TTACTATGATAGTAGTGGTT	CAGACCACACCCCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAAAGATCGTTACTATGATAGTAGTGGTTCAGACCACACCCCTCTTGACTAC	VKDRYYDSSGSDHTPLDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	251	9	8	1	0	88.9
Total	N/A	N/A	251	245	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6994   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGGCATGAACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  97.6% (245/251)  IGHV3-9*01   47   ...................................................C....C.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  N  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_6994   91   AGTGGGTCTCAGGTATCAGTTGGAATAGTGGTAACATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (245/251)  IGHV3-9*01   137  ................T................G........................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  D  R  Y  Y  D  S  S  
                    Query_6994   181  AGAAGTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGTAAAAGATCGTTACTATGATAGTAGTG  270
V  97.6% (245/251)  IGHV3-9*01   227  ....C..........................................................C.......-------------------  297
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (20/20)   IGHD3-22*01  4    -------------------------------------------------------------------------.................  20

                                      IMGT--------------------->                                  
                                      G  S  D  H  T  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_6994   271  GTTCAGACCACACCCCTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (20/20)   IGHD3-22*01  21   ...---------------------------------------------------------  23
J  100.0% (42/42)   IGHJ4*02     7    ------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_68800

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD2-21*01                                                                                           10.3    132   
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCG	ATTCC	AGT	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATTCCAGTCTTTTGATATT	ARRGRFQSFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  H
                    Query_6995   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATCA  90
V  92.4% (268/290)  IGHV5-51*01  6    ....................C........A.....................G.........A......C.........C.......GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  P
                    Query_6995   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCCC  180
V  92.4% (268/290)  IGHV5-51*01  96   ...................................................G.......A.....G.......G....C.....C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  A
                    Query_6995   181  GTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCGC  270
V  92.4% (268/290)  IGHV5-51*01  186  ...............G........C...................................G.......G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  R  R  G  R  F  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_6995   271  CTTGTATTATTGTGCCAGACGGGGCCGATTCCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  350
V  92.4% (268/290)  IGHV5-51*01  276  .A.......C.....G....------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD2-21*01  24   ---------------------------.....------------------------------------------------  28
J  88.9% (40/45)    IGHJ3*02     6    -----------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_351223

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           321     7e-90
IGHD2-8*01                                                                                            19.9    0.16 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGAGGGTA	ATATTATACTTCTGATGTATGC	CCCGCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCGGAGGGTAATATTATACTTCTGATGTATGCCCCGCCTGACTTC	ARAEGNIILLMYAPPDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  R  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_6996   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCGTTCAGTAGATATACCATGAACTGGGTCCGCCAGGCTCCTGGGAAGGGCCTGG  90
V  91.2% (227/249)  IGHV3-21*01  47   ...................................A.C........C....G........................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  D  S  N  T  I  Y  Y  T  D  S  V  K  G  R  F  S  I  S  R  D  N  A  
                    Query_6996   91   AGTGGGTCTCATCTATTAGTGGCGATAGTAATACCATATACTACACAGACTCGGTGAAGGGCCGATTCAGCATCTCCAGAGACAACGCCA  180
V  91.2% (227/249)  IGHV3-21*01  137  .............C......A.TAG.....G.TA..........G.......A................C....................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  F  L  Q  M  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  E  G  N  I  I  L  
                    Query_6996   181  AGAACTCACTGTTTCTTCAAATGCACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGCGAGCGGAGGGTAATATTATACTTC  270
V  91.2% (227/249)  IGHV3-21*01  227  ............A...G......A............................G............A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  81.8% (18/22)    IGHD2-8*01   4    ------------------------------------------------------------------------------.....G....AA  15

                                      GT-------------------->                                  
                                      L  M  Y  A  P  P  D  F  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_6996   271  TGATGTATGCCCCGCCTGACTTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  327
D  81.8% (18/22)    IGHD2-8*01   16   ..G.......-----------------------------------------------  25
J  95.1% (39/41)    IGHJ4*02     8    ----------------.....A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_22334

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-10*01                                                                                           37.2    9e-07 
IGHJ3*02                                                                                              62.2    6e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCATCG	CTATGGTTCGGGGAGTTAT	GC	TGATA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCATCGCTATGGTTCGGGGAGTTATGCTGATATG	ARGHRYGSGSYADM	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  I  V  S  G  V  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_6997   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (242/250)  IGHV4-31*03  49   ...................C...........G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_6997   91   CTGGAGTGGATTGGGTACATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTTCCATATCTGTAGACACGTCT  180
V  96.8% (242/250)  IGHV4-31*03  139  ..........................C..........................................A.......A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  R  Y  G  S  G 
                    Query_6997   181  AAGAATCAGTTCTCCCTGAAGCTGAGTTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCATCGCTATGGTTCGGGG  270
V  96.8% (242/250)  IGHV4-31*03  229  .....C....................C...............................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (19/19)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      -------------->                                  
                                       S  Y  A  D  M  W  G  R  G  T  M  V  T  V  S  S  
                    Query_6997   271  AGTTATGCTGATATGTGGGGCCGCGGGACAATGGTCACCGTCTCTTCAG  319
D  100.0% (19/19)   IGHD3-10*01  20   ......-------------------------------------------  25
J  92.7% (38/41)    IGHJ3*02     10   --------......C.......AA.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_22336

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           308     4e-86
IGHD3-3*01                                                                                            23.8    0.011
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	TAACT	TATTATGATTTTTGG	GTTAATCATCAATT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTAACTTATTATGATTTTTGGGTTAATCATCAATTCTACTTTGACTTC	ARVTYYDFWVNHQFYFDF	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	223	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  L  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_6998   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCCTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.6% (223/249)  IGHV3-11*01  47   ....................G.................T...................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  I  S  H  I  S  T  D  G  R  K  M  Y  Y  A  D  S  V  K  G  R  I  S  I  S  R  D  N  A  
                    Query_6998   91   AGTGCATTTCACACATTAGCACTGATGGCCGTAAAATGTACTACGCGGACTCTGTCAAGGGCCGAATCTCCATCTCCAGGGACAATGCCA  180
V  89.6% (223/249)  IGHV3-11*01  137  ....GG.....T.......T.G.AG...TA...CC..A........A........G.........T..A................C....  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  D  S  L  Y  L  Q  I  Y  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  T  Y  Y  D  F  W  
                    Query_6998   181  AGGACTCACTATATCTGCAAATTTACAGCCTGAGAGCCGAGGACACGGCCGTCTACTACTGTGCCAGAGTAACTTATTATGATTTTTGGG  270
V  89.6% (223/249)  IGHV3-11*01  227  ..A.......G...........GA............................G..T........G....---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD3-3*01   2    --------------------------------------------------------------------------.....C.........-  16

                                      IMGT--------------------->                                  
                                      V  N  H  Q  F  Y  F  D  F  W  G  L  G  T  L  V  T  V  S  S  
                    Query_6998   271  TTAATCATCAATTCTACTTTGACTTCTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  330
J  95.7% (45/47)    IGHJ4*02     2    -------------...........A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_22337

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           336     2e-94
IGHD2-15*01                                                                                           14.1    9.9  
IGHJ4*02                                                                                              54.5    2e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGGCC	GGATATT	CATCTGATGGACGTGAATATATGGCCCCGTTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGGCCGGATATTCATCTGATGGACGTGAATATATGGCCCCGTTGTTTGACTTT	AGAGYSSDGREYMAPLFDF	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	67	8	0	89.3
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	18	6	0	75
FR3-IMGT	176	289	114	98	16	0	86
CDR3-IMGT (germline)	290	292	3	3	0	0	100
Total	N/A	N/A	291	253	38	0	86.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  E  T  I  S  C  Q  A  S  G  Y  S  F  I 
                    Query_6999   2    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGAGACAATCTCCTGCCAGGCTTCCGGTTACAGTTTTATC  91
V  86.9% (253/291)  IGHV1-18*04  1    ...G.T..............................................T..AGG........A.......T.......CC....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  P  H  K  G  N  A  K  Y 
                    Query_6999   92   AACTACGGTATCAGTTGGGTGCGACAGGCCCCTGGACAGGGGCTCGAGTGGATGGGTTGGATCGGCCCGCACAAAGGTAACGCAAAATAT  181
V  86.9% (253/291)  IGHV1-18*04  91   .G............C.......................A.....T...........A......A..G.TT....T......A....C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  H  L  D  V  R  T  L  R  S  D  D 
                    Query_6999   182  GCACAGAGTTTCCAGGGCAGAGTCACGATGACCACAGACACATTGACGGGCACAGCTCACCTGGACGTGAGGACCCTGCGATCTGACGAC  271
V  86.9% (253/291)  IGHV1-18*04  181  .......AGC................C................CC...A.......CT..A....GC......G....A...........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  V  Y  Y  C  A  G  A  G  Y  S  S  D  G  R  E  Y  M  A  P  L  F  D  F  W  G  Q  G  A 
                    Query_6999   272  ACGGCCGTCTATTACTGTGCGGGGGCCGGATATTCATCTGATGGACGTGAATATATGGCCCCGTTGTTTGACTTTTGGGGCCAGGGAGCC  361
V  86.9% (253/291)  IGHV1-18*04  271  ........G............---------------------------------------------------------------------  291
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (7/7)     IGHD2-15*01  2    ---------------------------.......--------------------------------------------------------  8
J  88.4% (38/43)    IGHJ4*02     6    ------------------------------------------------------------------.......AC............A..  29

                                                         
                                       P  V  S  V  S  S  
                    Query_6999   362  CCGGTCTCCGTCTCCTCAG  380
J  88.4% (38/43)    IGHJ4*02     30   .T....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_159068

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           324     8e-91
IGHD1-26*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GGG	GGGAGCTACT	CTCCTTTT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGGGGGGAGCTACTCTCCTTTTTGCTTTTGATATC	VKGGATLLFAFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  S  Y  G  T  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7000   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTCAGTAGCTATGGCACGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTAG  90
V  91.9% (227/247)  IGHV3-64*05  47   ....................T...............CC.............CT.T.................................G.  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  V  S  S  I  T  S  N  A  E  S  T  Y  Y  T  N  S  V  K  D  R  F  T  I  S  R  D  N  S  
                    Query_7000   91   AATCTGTCTCCTCTATTACTAGTAATGCGGAGAGCACATACTACACAAACTCAGTGAAGGACAGATTCACCATCTCCAGAGACAATTCCA  180
V  91.9% (227/247)  IGHV3-64*05  137  ...A...T..AG......G........G..GT............G..G............G.............................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  G  G  A  T  L  L  F  
                    Query_7000   181  AGAACACGCTGTATCTTCAAATGAGCAGTCTGAGACCTGAGGACACGGCTGTGTATTACTGTGTGAAGGGGGGAGCTACTCTCCTTTTTG  270
V  91.9% (227/247)  IGHV3-64*05  227  ..............G....................G...............................-----------------------  293
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V                          
D  100.0% (10/10)   IGHD1-26*01  9    ----------------------------------------------------------------------..........----------  18
J  97.9% (46/47)    IGHJ3*02     4    ----------------------------------------------------------------------------------------..  5

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_7000   271  CTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  315
J  97.9% (46/47)    IGHJ3*02     6    ..........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_159069

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           360     1e-101
IGHD2-21*01                                                                                           12.2    31    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGAACCCCG	TATTCC	CGTCGCCA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGATGAACCCCGTATTCCCGTCGCCAAC	VRDEPRIPVAN	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  T  V  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7001   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCACTGTTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-48*03  47   ....................................C.....G.AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  G  G  S  T  I  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_7001   91   AGTGGGTTTCATACATTAGTAGTGGTGGTTCTACCATATACTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-48*03  137  .......................A.....AG..........................A................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  E  P  R  I  P  V  
                    Query_7001   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGTGCGAGATGAACCCCGTATTCCCGTCG  270
V  96.0% (240/250)  IGHV3-48*03  227  ...............................................................C.A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*01  23   -------------------------------------------------------------------------------......-----  28

                                      ---->                                  
                                      A  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7001   271  CCAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (36/36)   IGHJ4*02     13   ---....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_22332

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     2e-87
IGHD3-22*01                                                                                           16.1    2.4  
IGHJ3*01                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGAATGCGGGTGGATGACAGTAACAC	TTATTACT	CCTGGAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGAATGCGGGTGGATGACAGTAACACTTATTACTCCTGGAATGATGCTTTTGATGTC	AKDRMRVDDSNTYYSWNDAFDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  Y  A  M  S  W  V  R  Q  P  P  G  K  G  L  
                    Query_7002   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACTATGCCATGAGCTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGC  90
V  90.0% (225/250)  IGHV3-23*01  47   ..........................................G..G.........................G.................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  G  I  S  S  V  S  D  T  T  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7002   91   AGTGGGTCTCAGGTATTAGTAGTGTTAGCGATACCACAGCCTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCGA  180
V  90.0% (225/250)  IGHV3-23*01  137  ............C.......G..AG.G.T.G..G....TA...C..........................................T.C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  I  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  A  Y  F  C  A  K  D  R  M  R  V  D  D  
                    Query_7002   181  AGAATATATTGTATCTGCAAATGAATAGCCTGAGAGTCGAGGACACGGCCGCATATTTCTGTGCGAAAGATCGAATGCGGGTGGATGACA  270
V  90.0% (225/250)  IGHV3-23*01  227  ....C.CGC................C..........C..............T.....A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -CDR3-IMGT--------------------------->                                  
                                      S  N  T  Y  Y  S  W  N  D  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7002   271  GTAACACTTATTACTCCTGGAATGATGCTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  342
D  100.0% (8/8)     IGHD3-22*01  22   -------........---------------------------------------------------------  29
J  100.0% (50/50)   IGHJ3*01     1    ----------------------..................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_159064

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-9*01                                                                                            14.1    8.4  
IGHJ2*01                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTACGC	TTTTGAC	GGCA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTACGCTTTTGACGGCAACTGGTACTTCGATCTC	AREYAFDGNWYFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7003   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGCCATGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ...............................................T...................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  T  T  G  G  S  T  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_7003   91   AGTGGGTTTCAGCTATTACTACTACTGGTGGTAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  .......C..........G.GG..G.............T................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  M  E  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  Y  A  F  D  G  N  
                    Query_7003   181  AGAACACGTTGTCTATGGAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAGAGAGTACGCTTTTGACGGCAACT  270
V  94.0% (235/250)  IGHV3-23*01  227  ........C...A.C..C......................G.........................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-9*01   12   ----------------------------------------------------------------------------.......-------  18
J  100.0% (51/51)   IGHJ2*01     3    ---------------------------------------------------------------------------------------...  5

                                      ------------->                                  
                                      W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_7003   271  GGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  318
J  100.0% (51/51)   IGHJ2*01     6    ................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_159067

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_7004   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_7004   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_7004   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_7004   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_159060

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           358     3e-101
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	N/A	N/A	CCCCGCATCGCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCCGCATCGCGTTTTGACTAC	ARGPASRFDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  F  G  G  S  F  R  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7005   1    ACCCTGTCCCTCACCTGCGCTGTCTTTGGTGGGTCCTTCAGGGGGTCCTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  96.7% (237/245)  IGHV4-34*01  49   .........................A...............T..T.A...........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_7005   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAATTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-34*01  139  ...................................C....................................G.................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  P  A  S  R  F  D  Y  W 
                    Query_7005   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGTCCGCCGCGGACACGGCTGTATATTACTGTGCGAGAGGCCCCGCATCGCGTTTTGACTACTGG  270
V  96.7% (237/245)  IGHV4-34*01  229  ...........................A...................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
J  100.0% (43/43)   IGHJ4*02     6    ------------------------------------------------------------------------------............  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_7005   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (43/43)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_159061

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           283     1e-78
IGHD3-3*01                                                                                            18.0    0.57 
IGHJ4*01                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGCA	N/A	TTATTATAC	GGGGACCTATCCAC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATTATTATACGGGGACCTATCCACTTGACCAC	ARHYYTGTYPLDH	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	10	11	0	47.6
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	213	32	0	86.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  S  W  S  W  I  R  Q  F  P  G  K  G  L  E 
                    Query_7006   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTACTCCTGGAGTTGGATCCGGCAGTTCCCAGGGAAGGGACTGGAG  90
V  86.9% (213/245)  IGHV4-59*08  49   ...............................G..........A......A......C............CC...................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  R  A  H  D  M  K  T  N  Y  N  P  S  L  K  N  R  L  T  I  S  V  D  T  S  R  S 
                    Query_7006   91   TGGATTGGATATAGGGCTCACGATATGAAGACCAACTACAACCCCTCCCTCAAGAATCGACTCACCATATCAGTGGACACGTCCAGGAGC  180
V  86.9% (213/245)  IGHV4-59*08  139  ........G....TCTA.T..AG.GG..GC.........................G....G.............A..........A..A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  V  A  L  E  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  H  Y  Y  T  G  T  Y  P  L 
                    Query_7006   181  CAGGTCGCCCTGGAGTTGACCTCTGTGACCGCCGCAGACACGGCCATATATTATTGTGCGAGGCATTATTATACGGGGACCTATCCACTT  270
V  86.9% (213/245)  IGHV4-59*08  229  ...T..T.....A..C...G.........................G.G.....C........A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD3-3*01   22   -----------------------------------------------------------------.........----------------  30
J  92.5% (37/40)    IGHJ4*01     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                
                                       D  H  W  G  H  G  I  L  V  T  V  S  S
                    Query_7006   271  GACCACTGGGGCCACGGAATCCTGGTCACCGTCTCCTC  308
J  92.5% (37/40)    IGHJ4*01     9    ...T..........A....C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_159062

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  L  R  Q  A  P  G  K  G  P  
                    Query_7007   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGCTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...G........................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_7007   91   AGTGGGTCTCAGCGATTACTGGGAGTGGTAGTAGCACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  .............T....G...T......G..............G......................................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_7007   181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  93.6% (234/250)  IGHV3-23*01  227  ...............................G....................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7007   271  ATTCACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_159063

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           322     2e-90
IGHD2-15*01                                                                                           21.8    0.043
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAATTG	GTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTGGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAIGIAGNCYGRGPHFDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_7008   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_7008   91   CTAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-61*08  139  ..G..................T..T................C.................G.......TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  G  I  A  G  N 
                    Query_7008   181  AGGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGCAATTGGTATTGCTGGTAAC  270
V  91.2% (228/250)  IGHV4-61*08  229  .A.................A.....GC..........................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  85.0% (17/20)    IGHD2-15*01  9    ----------------------------------------------------------------------------...G..G.....G.  22

                                      3-IMGT----------------------->                                  
                                       C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7008   271  TGCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  85.0% (17/20)    IGHD2-15*01  23   ......----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_261352

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           433     1e-123
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ5*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGTGAGGG	GTATAGCATCTCGTCC	CC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTGAGGGGTATAGCATCTCGTCCCCCAACTGGTTCGACCCC	ARGEGYSISSPNWFDP	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  R  H
                    Query_7009   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGGTACAGTTTTACCAGGCA  90
V  97.9% (283/289)  IGHV5-51*01  6    ........................................................................A.....C........CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  A  T  R  Y  S  P
                    Query_7009   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGCTACCAGATACAGCCC  180
V  97.9% (283/289)  IGHV5-51*01  96   ..........................................................................A...............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7009   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (283/289)  IGHV5-51*01  186  ............................................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        M  Y  Y  C  A  R  G  E  G  Y  S  I  S  S  P  N  W  F  D  P  W  G  Q  G  T  L  V  I  V  S
                    Query_7009   271  CATGTATTACTGTGCGAGAGGTGAGGGGTATAGCATCTCGTCCCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTC  360
V  97.9% (283/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  93.8% (15/16)    IGHD6-6*01   3    ---------------------------........G.......-----------------------------------------------  18
J  98.0% (49/50)    IGHJ5*02     2    ---------------------------------------------......................................C......  46

                                           
                                        S  
                    Query_7009   361  CTCAG  365
J  98.0% (49/50)    IGHJ5*02     47   .....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_193754

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTTGTCCCCGACACCC	TATTATTATGACAGT	GGCGATGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATTTGTCCCCGACACCCTATTATTATGACAGTGGCGATGGCTTTGACTAC	AKDLSPTPYYYDSGDGFDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  R  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7010   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTTAGAGACTATGCCATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-23*01  47   ....................G......................CAG..........AG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  G  G  A  G  T  H  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  R  T  
                    Query_7010   91   AGTGGGTCTCAGGTATAAGTGGTGGTGGTGCTGGAACACACTACACAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAGAACCA  180
V  93.2% (233/250)  IGHV3-23*01  137  ............C...T......A......G.A.C...T.....G.......................................ATT...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  L  S  P  T  P  Y  
                    Query_7010   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATTTGTCCCCGACACCCTATT  270
V  93.2% (233/250)  IGHV3-23*01  227  ......................................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  86.7% (13/15)    IGHD3-22*01  2    --------------------------------------------------------------------------------------....  5

                                      -IMGT----------------------->                                  
                                      Y  Y  D  S  G  D  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  T  
                    Query_7010   271  ATTATGACAGTGGCGATGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCACAG  333
D  86.7% (13/15)    IGHD3-22*01  6    .C.....T...----------------------------------------------------  16
J  97.7% (43/44)    IGHJ4*02     5    -------------------........................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_323919

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           346     2e-97
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCCAA	GTATAGAAGTGGC	ACCTACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCCAAGTATAGAAGTGGCACCTACTTTTGACTAT	AREPSIEVAPTFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  T  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  R  R 
                    Query_7011   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTACTGGTGGCTACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAGGAGA  90
V  94.0% (236/251)  IGHV4-61*08  49   .........................................C.G......T...........C.................A....A.G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 
                    Query_7011   91   CTGGAGTGGATTGGCTATATCTATTACACTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACAAGTCG  180
V  94.0% (236/251)  IGHV4-61*08  139  ..............G.............G......C............................................A....C...C  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  P  S  I  E  V  A 
                    Query_7011   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGAGCCAAGTATAGAAGTGGCA  270
V  94.0% (236/251)  IGHV4-61*08  229  ...................A.......................................C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD6-19*01  3    ----------------------------------------------------------------------------......C......-  15

                                      -------------->                                  
                                       P  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7011   271  CCTACTTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  97.7% (42/43)    IGHJ4*02     6    ------........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_323918

Length=412
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*02                                                                                            385     5e-109
IGHD2-15*01                                                                                           23.8    0.013 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*02	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGGCGG	TTGTAGTTCTGGTTGCTGCTA	AGGGAGGGGGT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGGCGGTTGTAGTTCTGGTTGCTGCTAAGGGAGGGGGTTACGGCATGGACGTC	ARDLAVVVLVAAKGGGYGMDV	291	353	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	19	5	0	79.2
FR3-IMGT	177	290	114	104	10	0	91.2
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	271	25	0	91.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  R  A  S  G  Y  T  L  T 
                    Query_7012   3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAGGGCTTCTGGGTACACCCTCACC  92
V  91.6% (271/296)  IGHV1-2*02   1    .......................G...........................................A.........A......T.....  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  H  Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  A  T  N  S 
                    Query_7012   93   GACCACTATGTCCACTGGGTGCGACAGGCCCCTGGACAGGGCCTTGAGTGGATGGGATGGATCAACCCTAATAGCGGCGCCACGAACTCT  182
V  91.6% (271/296)  IGHV1-2*02   91   .G.T.....A.G..........................A..G.............................C..T..T.G...A....A.  180
                                       G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  I  N  T  A  Y  M  E  L  I  R  L  R  V  D  D 
                    Query_7012   183  GCACAGAAGTTTCAGGGCAGGGTCACCATGACCAGGGACACGTCCATCAACACAGCCTACATGGAACTGATCAGACTGAGAGTCGACGAC  272
V  91.6% (271/296)  IGHV1-2*02   181  .................................................G...............G....G...G......TCT......  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                      -----------------><--------------------------CDR3-IMGT-------------------------->         
                                       T  A  I  Y  Y  C  A  R  D  L  A  V  V  V  L  V  A  A  K  G  G  G  Y  G  M  D  V  W  G  Q 
                    Query_7012   273  ACGGCCATTTATTACTGTGCGAGAGATCTGGCGGTTGTAGTTCTGGTTGCTGCTAAGGGAGGGGGTTACGGCATGGACGTCTGGGGCCAA  362
V  91.6% (271/296)  IGHV1-2*02   271  ......G.G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  85.7% (18/21)    IGHD2-15*01  7    ----------------------------------.......GG....A.......-----------------------------------  27
J  97.9% (47/48)    IGHJ6*02     15   ------------------------------------------------------------------.....T..................  38

                                                              
                                       G  T  T  V  T  V  S  S 
                    Query_7012   363  GGGACCACGGTCACCGTCTCCTCA  386
J  97.9% (47/48)    IGHJ6*02     39   ........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40393728


Query= Query_97829

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           355     3e-100
IGHD3-22*01                                                                                           27.6    7e-04 
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	CAGG	ACTATGATAGTAGT	AGGGGGG	ACGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAGGACTATGATAGTAGTAGGGGGGACGATAAGGACGTC	VRQDYDSSRGDDKDV	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_7013   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.6% (238/249)  IGHV4-31*03  49   ................................................G.........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  S  S  G  G  T  Y  Y  N  P  S  L  K  S  R  V  S  M  S  V  D  T  S 
                    Query_7013   91   CTGGAGTGGATTGGATACATCTATTCCAGTGGGGGTACCTACTACAACCCGTCCCTCAAGAGTCGAGTTAGCATGTCCGTAGACACGTCT  180
V  95.6% (238/249)  IGHV4-31*03  139  ..............G..........A.......A.C..................................C...A..A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  H  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  Q  D  Y  D  S  S  R 
                    Query_7013   181  AAGAACCACTTCTCCCTGAACCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGTGAGACAGGACTATGATAGTAGTAGG  270
V  95.6% (238/249)  IGHV4-31*03  229  ........G...........G...........................................C....---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (14/14)   IGHD3-22*01  6    -------------------------------------------------------------------------..............---  19

                                      ----------------->                                 
                                       G  D  D  K  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7013   271  GGGGACGATAAGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  321
J  95.7% (45/47)    IGHJ6*02     16   ----...G..T........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_151659

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           372     2e-105
IGHD2-21*01                                                                                           10.3    120   
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGGGACCTAC	ATTCC	CGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGGACCTACATTCCCGCCTACTTTGACTAC	ARDQGTYIPAYFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  N  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7014   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.6% (244/250)  IGHV3-21*01  47   ...................................................G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  N  S  N  Y  I  F  Y  A  D  S  V  Q  G  R  F  T  L  S  R  D  N  A  
                    Query_7014   91   AGTGGGTCTCATCCATTAGTAGTAATAGTAATTACATATTCTACGCAGACTCAGTGCAGGGCCGATTCACCCTCTCCAGAGACAACGCCA  180
V  97.6% (244/250)  IGHV3-21*01  137  ........................G.....G........A................A..............A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Q  G  T  Y  I  P  
                    Query_7014   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCAGGGGACCTACATTCCCG  270
V  97.6% (244/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-21*01  24   -----------------------------------------------------------------------------------.....--  28

                                      ------------->                                  
                                      A  Y  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_7014   271  CCTACTTTGACTACTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTCAG  318
J  97.9% (46/47)    IGHJ4*02     2    -..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_48708

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           346     2e-97
IGHD3-3*01                                                                                            21.8    0.042
IGHJ5*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGATGGGGAAGGG	ACGATTTTTGG	GATGGGGTGAA	GTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGATGGGGAAGGGACGATTTTTGGGATGGGGTGAAGTTCGACTCC	ARGRWGRDDFWDGVKFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  T  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7015   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCACTAATTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-48*03  47   ....................G.....................G..G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  G  D  S  V  K  G  R  F  T  I  S  K  D  S  A  
                    Query_7015   91   AGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGGGGACTCTGTGAAGGGCCGATTCACCATCTCCAAAGACAGCGCCA  180
V  94.4% (235/249)  IGHV3-48*03  137  .............................................CA...............................G.....A.....  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  V  F  L  Q  M  N  D  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  R  W  G  R  D  D  
                    Query_7015   181  AGAACTCAGTCTTTCTGCAAATGAATGACCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGCCGATGGGGAAGGGACGATT  270
V  94.4% (235/249)  IGHV3-48*03  227  ........C.G.A............CAG.........................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-3*01   6    ------------------------------------------------------------------------------------......  11

                                      IMGT--------------------->                                  
                                      F  W  D  G  V  K  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7015   271  TTTGGGATGGGGTGAAGTTCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (11/11)   IGHD3-3*01   12   .....-------------------------------------------------------  16
J  97.7% (43/44)    IGHJ5*01     8    ----------------..................A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_97824

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            406     1e-115
IGHD6-19*01                                                                                           21.8    0.046 
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACC	GGGTGTAGCAATGGCTG	ATTTATC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAACCGGGTGTAGCAATGGCTGATTTATCCTATTACTACGGTCTGGACGTC	AREPGVAMADLSYYYGLDV	273	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	25	2	0	92.6
FR3-IMGT	159	272	114	110	4	0	96.5
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	280	270	10	0	96.4


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  I  S  R  N  T  D  A  W  N  W  
                    Query_7016   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTATCTCTCGCAACACTGATGCTTGGAACTGGA  90
V  96.4% (270/280)  IGHV6-1*01   26   ...........................................................G.....A......G..C..............  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  K  S  K  W  Y  Y  D  Y  A  V  S  V  K  
                    Query_7016   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAAGTCCAAGTGGTATTATGATTATGCAGTATCTGTGAAAA  180
V  96.4% (270/280)  IGHV6-1*01   116  ...................................................G.............A........................  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  H  L  S  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_7016   181  GTCGAATTACCATCAACCCCGACACATCCAAGAACCAGTTCTCCCTGCATCTGAGCTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  96.4% (270/280)  IGHV6-1*01   206  .......A...........A.............................G....A...................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-----------------------CDR3-IMGT----------------------->                               
                                      C  A  R  E  P  G  V  A  M  A  D  L  S  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  
                    Query_7016   271  GTGCAAGAGAACCGGGTGTAGCAATGGCTGATTTATCCTATTACTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCT  360
V  96.4% (270/280)  IGHV6-1*01   296  ..........--------------------------------------------------------------------------------  305
                                      C  A  R                                                                                   
D  88.2% (15/17)    IGHD6-19*01  1    -------------....A.....G......------------------------------------------------------------  17
J  96.4% (53/55)    IGHJ6*02     8    -------------------------------------...C.........A.......................................  60

                                        
                                      S 
                    Query_7016   361  CA  362
J  96.4% (53/55)    IGHJ6*02     61   ..  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_97825

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           325     3e-91
IGHD2-15*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGCCCGCTGCCC	GTGGTGGGTGCTA	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATCAGCCCGCTGCCCGTGGTGGGTGCTATGACTAC	VRDQPAARGGCYDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  L  R  S  H  W  M  H  W  V  R  Q  D  P  G  K  G  L  
                    Query_7017   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCCTCAGAAGCCACTGGATGCACTGGGTCCGCCAAGATCCAGGGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-74*01  47   .....................C................T....T...T........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  A  R  I  N  F  D  G  S  S  T  S  Y  V  D  S  V  K  G  R  F  N  I  S  R  D  N  A  
                    Query_7017   91   TATGGGTCGCACGTATTAATTTTGATGGGAGTAGTACAAGTTATGTGGACTCCGTCAAGGGCCGATTCAACATCTCCAGAGACAACGCCA  180
V  91.6% (229/250)  IGHV3-74*01  137  .G......T...........AG............C.....C..C.C.........G.............C....................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  G  V  Y  Y  C  V  R  D  Q  P  A  A  R  G  
                    Query_7017   181  AGAACACATTGTATCTGCAAATGAATAGTCTGAGAGTCGAGGACACGGGTGTGTATTACTGTGTAAGAGATCAGCCCGCTGCCCGTGGTG  270
V  91.6% (229/250)  IGHV3-74*01  227  .......GC................C..........C...........C..............C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.6% (11/13)    IGHD2-15*01  15   ------------------------------------------------------------------------------------.....A  20

                                      ------------->                                  
                                      G  C  Y  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_7017   271  GGTGCTATGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  318
D  84.6% (11/13)    IGHD2-15*01  21   .C.....-----------------------------------------  27
J  97.6% (40/41)    IGHJ4*02     8    -------...................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_151655

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           366     2e-103
IGHD1-1*01                                                                                            12.2    32    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTAC	AEEKRRVPRGTFHY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7018   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-23*01  47   ................................T.........G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  
                    Query_7018   91   AGTGGGTCTCAGCCATTAGTGGTGGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGA  180
V  96.8% (242/250)  IGHV3-23*01  137  .............T.........A......................................................G.........C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  
                    Query_7018   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGG  270
V  96.8% (242/250)  IGHV3-23*01  227  .................................................................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------------------------......------------  17

                                      ------------->                                  
                                      G  T  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7018   271  GAACCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (43/44)    IGHJ4*02     5    ----....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_151654

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           439     2e-125
IGHD3-16*01                                                                                           12.2    36    
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTTGAGG	GATTAC	CAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTAC	ARSLRDYQPFYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	285	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_7019   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTA  90
V  98.6% (285/289)  IGHV5-51*01  6    ......................................................................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  H  P  G  D  S  D  T  R  Y  S  P
                    Query_7019   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCCATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.6% (285/289)  IGHV5-51*01  96   ..........................................................T...............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7019   181  GTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACTGC  270
V  98.6% (285/289)  IGHV5-51*01  186  ......................A................................................................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  S  L  R  D  Y  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_7019   271  CATGTATTACTGTGCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  359
V  98.6% (285/289)  IGHV5-51*01  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  8    ----------------------------......-------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ------------------------------------------....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_97820

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_7020   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  96.2% (278/289)  IGHV5-51*03  6    ...............................A..............................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  G  P
                    Query_7020   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACGGCCC  180
V  96.2% (278/289)  IGHV5-51*03  96   ...................................................G............................G....A....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_7020   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAATACCGCCTACCTGCAGTGGAGTAGCCTGCAGGCCTCGGACACCGC  270
V  96.2% (278/289)  IGHV5-51*03  186  ............................................GC....................C......A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7020   271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGTCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.2% (278/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    ------------------------------------------............C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_97821

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            413     1e-117
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	KRSAECS*Y	279	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	56	57	53	2	2	93
CDR1-IMGT	57	86	30	26	4	0	86.7
FR2-IMGT	87	137	51	51	0	0	100
CDR2-IMGT	138	164	27	27	0	0	100
FR3-IMGT	165	278	114	113	1	0	99.1
CDR3-IMGT (germline)	279	285	7	7	0	0	100
Total	N/A	N/A	286	277	7	2	96.9


Alignments

                                     <-----------------------FR1-IMGT------------------------><----------CDR1-IMGT---------><--
                                      S  G  A    A  G  A  A  L  A  D  P  L  T  H  L  C  H  L  R  G  Q  F  L  *  Q  R  C  C  L  
                    Query_7021  2    TCAGGTGCAG--CTGGTGCAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGG  89
V  96.9% (277/286)  IGHV6-1*01  19   ......C...GA......A...............................................G......G....AG..........  108
                                      S  G  P  G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W 

                                     ------------------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------
                                     E  L  D  Q  A  V  P  I  E  R  P  *  V  A  G  K  D  I  L  Q  V  Q  V  V  *  *  L  C  S  I  
                    Query_7021  90   AACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCT  179
V  96.9% (277/286)  IGHV6-1*01  109  ..........................................................................................  198
                                      N  W  I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S 

                                     --------------------------------------FR3-IMGT--------------------------------------------
                                     C  E  K  S  N  N  H  R  P  R  H  I  Q  E  P  V  L  P  A  A  E  L  C  D  S  R  G  H  G  C  
                    Query_7021  180  GTGAAAAGTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTG  269
V  96.9% (277/286)  IGHV6-1*01  199  .....................A....................................................................  288
                                      V  K  S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V 

                                     --------><----------CDR3-IMGT--------->                                  
                                     V  L  L  C  K  R  S  A  E  C  S  *  Y  L  G  P  R  D  N  G  H  R  L  F   
                    Query_7021  270  TATTACTGTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  342
V  96.9% (277/286)  IGHV6-1*01  289  ................---------------------------------------------------------  304
                                      Y  Y  C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02    4    --------------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_151651

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD3-3*01                                                                                            35.3    4e-06
IGHJ6*02                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTTAATCTCCCCTC	GTATTACGATTTTTGGAG	CGGAGGCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTTAATCTCCCCTCGTATTACGATTTTTGGAGCGGAGGCAACTACTACTACGGTTTGGACGTC	ARLNLPSYYDFWSGGNYYYGLDV	235	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	120	21	18	0	3	85.7
FR3-IMGT	121	234	114	107	7	0	93.9
CDR3-IMGT (germline)	235	239	5	5	0	0	100
Total	N/A	N/A	242	226	13	3	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  A  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7022   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCGCAAGTTACTACTGGAGCTGGATCCGGCAGCCCCCTGGAAAGGGACTGGAG  90
V  93.4% (226/242)  IGHV4-59*08  49   ...............................G.......AGT................................A..G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S     N  Y  N  P  S  L  K  S  R  L  T  M  S  L  D  T  S  K  N 
                    Query_7022   91   TGGATTGGGTATATCTATTACAGTGGGAG---CAACTACAACCCCTCCCTCAAGAGTCGACTCACCATGTCACTAGACACGTCCAAGAAC  177
V  93.4% (226/242)  IGHV4-59*08  139  .............................CAC............................G.......A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  F  S  L  N  L  T  S  V  T  A  A  D  S  A  M  Y  Y  C  A  R  L  N  L  P  S  Y  Y  D  F 
                    Query_7022   178  CAGTTCTCCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCCATGTATTACTGTGCGAGGCTTAATCTCCCCTCGTATTACGATTTT  267
V  93.4% (226/242)  IGHV4-59*08  229  ..............G....G...................A.....G................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (18/18)   IGHD3-3*01   1    -----------------------------------------------------------------------------.............  13

                                      3-IMGT----------------------------->                                 
                                       W  S  G  G  N  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7022   268  TGGAGCGGAGGCAACTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  336
D  100.0% (18/18)   IGHD3-3*01   14   .....----------------------------------------------------------------  18
J  98.2% (55/56)    IGHJ6*02     7    -------------..............A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_151650

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           352     3e-99
IGHD1-20*01                                                                                           10.3    121  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TAGC	GGTAT	TGGCCGGTCGTTGGTCCGC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTAGCGGTATTGGCCGGTCGTTGGTCCGCTATGGACGTC	ARVAVLAGRWSAMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  W  I  H  W  V  R  Q  G  P  G  K  G  L  
                    Query_7023   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTCAGTAGTTACTGGATACACTGGGTCCGCCAAGGTCCAGGAAAGGGGCTGA  90
V  95.2% (237/249)  IGHV3-74*01  47   ......................................T.......C........G................C......G.........G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      M  W  V  S  R  I  N  S  D  G  S  G  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7023   91   TGTGGGTCTCACGTATTAATAGTGATGGGAGTGGCACAAGTTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (237/249)  IGHV3-74*01  137  ................................A.......C.................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  D  Q  D  T  A  V  Y  Y  C  A  R  V  A  V  L  A  G  R  
                    Query_7023   181  AGAACACGGTGTATCTGCAAATGAACAGTCTGAGAGACCAGGACACGGCTGTCTATTACTGTGCAAGAGTAGCGGTATTGGCCGGTCGTT  270
V  95.2% (237/249)  IGHV3-74*01  227  ........C...........................C.G.............G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-20*01  1    -------------------------------------------------------------------------.....------------  5

                                      ---------------->                              
                                      W  S  A  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_7023   271  GGTCCGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  317
J  100.0% (40/40)   IGHJ6*02     20   -------........................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_145197

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           300     8e-84
IGHD2-8*02                                                                                            12.2    33   
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTTACTTCTATGGCGAACCCGGGA	TACTGG	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTTACTTCTATGGCGAACCCGGGATACTGGGGTATGGACGTC	AKDVTSMANPGYWGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_7024   1    GGTCCCTGAGACTCTCCTGCGCAGCCTCTGGATTCACCTTCAGTAGTTACGCCATGCACTGGGTCCGCCAGGCTCCAGGCAGGGGCCTGC  90
V  88.4% (221/250)  IGHV3-30*18  47   ...................T..........................C..T.G.............................A...G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  M  I  S  Y  N  G  G  N  R  F  Y  A  D  F  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7024   91   AGTGGGTGGCGATGATATCGTACAATGGAGGCAATCGCTTTTATGCAGACTTCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  88.4% (221/250)  IGHV3-30*18  137  ..........AG.T.....A..TG.....A.T...AAA.AC..........C......................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  M  D  L  Q  M  H  S  L  R  G  D  D  T  A  I  Y  Y  C  A  K  D  V  T  S  M  A  N  
                    Query_7024   181  AGAACACGATGGATCTGCAAATGCACAGCCTGAGAGGTGACGACACGGCCATATATTACTGTGCGAAAGATGTTACTTCTATGGCGAACC  270
V  88.4% (221/250)  IGHV3-30*18  227  ........C..T...........A............C...G........TG.G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      GT-------------------->                                
                                      P  G  Y  W  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_7024   271  CGGGATACTGGGGTATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTCCTC  325
D  100.0% (6/6)     IGHD2-8*02   10   -----......--------------------------------------------  15
J  97.7% (43/44)    IGHJ6*02     18   -----------....................A.......................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_192651

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            372     2e-105
IGHD3-22*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACAG	ATGATAGT	GGACCTAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACAGATGATAGTGGACCTAGTGACTCC	ARTDDSGPSDS	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	112	2	0	98.2
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	242	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_7025   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  98.4% (242/246)  IGHV4-4*02   49   ..........................................................................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_7025   91   GAATGGATTGGGGAGATCTATCATAGTGGGAGCACCAACTACAATCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  98.4% (242/246)  IGHV4-4*02   139  ..G...........A.............................C.............................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  D  D  S  G  P  S  D 
                    Query_7025   181  AACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAACAGATGATAGTGGACCTAGTGAC  270
V  98.4% (242/246)  IGHV4-4*02   229  ......................G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD3-22*01  9    ----------------------------------------------------------------------........------------  16
J  95.1% (39/41)    IGHJ4*02     8    --------------------------------------------------------------------------------------....  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7025   271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCATCAG  307
J  95.1% (39/41)    IGHJ4*02     12   .A..............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_193753

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           336     1e-94
IGHD1-1*01                                                                                            18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAG	TGGAACGAC	GGG	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGAGTGGAACGACGGGGACGAC	ARHEWNDGDD	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	233	18	0	92.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  N  N  L  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_7026   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGAGACTCCATCAGCAATAATCTTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  92.8% (233/251)  IGHV4-39*01  49   ...................C.........T.G...........G..G.AG.......................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  A  I  Y  Y  T  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7026   91   CTGGAGTGGATTGGAGCTATCTATTATACTGGAAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  92.8% (233/251)  IGHV4-39*01  139  ..............GAG...........G...G.G.......................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       K  N  K  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  E  W  N  D  G  D 
                    Query_7026   181  AAGAACAAGTTCTCCCTGAAGCTGACCTCTGTCACCGCCGCAGACACGGCTGTGTACTACTGTGCGAGACATGAGTGGAACGACGGGGAC  270
V  92.8% (233/251)  IGHV4-39*01  229  ......C..................G......G.......................T..............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD1-1*01   9    ---------------------------------------------------------------------------.........------  17
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7026   271  GACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_212882

Length=407
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           385     5e-109
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	CCAACCCTCCT	TGATAATAGTGGTTATTAC	GACGAGGGCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACCAACCCTCCTTGATAATAGTGGTTATTACGACGAGGGCGACTACTACGGTAAGGAGGTC	VRPTLLDNSGYYDEGDYYGKEV	286	351	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	68	3	0	95.8
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	171	24	19	2	3	79.2
FR3-IMGT	172	285	114	107	7	0	93.9
CDR3-IMGT (germline)	286	291	6	5	1	0	83.3
Total	N/A	N/A	290	270	17	3	93.1


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  S  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  L  T  S  
                    Query_7027   5    TGCAGCTGGTGCAGTCTGGATCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAGGATCTCCTGTAAGGGCTCTGGATACAGCCTTACCAGTT  94
V  93.1% (270/290)  IGHV5-51*03  5    ....................G..............................A...............T............T.......C.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y     R  D  S  D  A  R  Y  N  
                    Query_7027   95   ATTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCGTCTATC---GTGACTCTGATGCCAGATACAACC  181
V  93.1% (270/290)  IGHV5-51*03  95   .C..................................................G...A......CTG...........A.........G..  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  M  S  V  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  
                    Query_7027   182  CGTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGCGGAGCCTGAAGGCCTCGGACACCG  271
V  93.1% (270/290)  IGHV5-51*03  185  .........................C....C..................................A.C......................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><----------------------------CDR3-IMGT--------------------------->          
                                      A  T  Y  Y  C  V  R  P  T  L  L  D  N  S  G  Y  Y  D  E  G  D  Y  Y  G  K  E  V  W  G  R  
                    Query_7027   272  CCACATATTACTGTGTGAGACCAACCCTCCTTGATAATAGTGGTTATTACGACGAGGGCGACTACTACGGTAAGGAGGTCTGGGGCCGAG  361
V  93.1% (270/290)  IGHV5-51*03  275  ...TG..........C....----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  94.7% (18/19)    IGHD3-22*01  10   -------------------------------.....G.............----------------------------------------  28
J  92.5% (49/53)    IGHJ6*02     10   ------------------------------------------------------------............T...C..........A..  39

                                                             
                                      G  T  T  V  T  V  S  S 
                    Query_7027   362  GGACTACGGTCACCGTCTCCTCA  384
J  92.5% (49/53)    IGHJ6*02     40   ....C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39867768


Query= Query_212883

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           276     3e-76
IGHD6-6*01                                                                                            14.1    8.3  
IGHJ3*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-6*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCC	AGTATCGAAGATCGTC	GGCTGGTTTCTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCAGTATCGAAGATCGTCGGCTGGTTTCTCTTGATATC	ARPSIEDRRLVSLDI	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	209	33	0	86.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  R  G  Y  Y  W  S  W  L  R  Q  S  P  G  K  G  L  Q  
                    Query_7028   4    CCCTGAGACTCTCCTGTGCTGTTTATGGCGGATCATTCAGGGGCTACTACTGGAGTTGGCTCCGCCAGTCCCCAGGGAAGGGGCTGCAGT  93
V  86.4% (209/242)  IGHV4-34*01  50   .....TCC...A....C.....C.....T..G..C.....T..T...........C...A........C.................G...  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  R  G  I  T  N  Y  I  P  S  L  K  S  R  L  T  M  S  V  D  T  S  K  N  
                    Query_7028   94   GGATTGGAGAAATCAATCACAGAGGGATCACCAATTACATCCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACACCTCCAAGAATC  183
V  86.4% (209/242)  IGHV4-34*01  140  .......G...........T..T..A.G......C....A...................G.......A...........G........C.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  S  I  E  D  R  R  L  V  
                    Query_7028   184  AATTCTCCCTGAAACTTAGTTCTGTGACCGCCGCGGACACGGCCGTCTACTACTGTGCGAGACCCAGTATCGAAGATCGTCGGCTGGTTT  273
V  86.4% (209/242)  IGHV4-34*01  230  .G...........G..G..C.......................T..G..T............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  81.2% (13/16)    IGHD6-6*01   2    -----------------------------------------------------------------.....A.C..C.....---------  17

                                      ---------->                                  
                                      S  L  D  I  W  G  Q  G  T  V  V  V  V  S  S  
                    Query_7028   274  CTCTTGATATCTGGGGCCAAGGGACAGTGGTCGTTGTCTCTTCAG  318
J  90.5% (38/42)    IGHJ3*02     9    ---.......................A.....ACC..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_212880

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           355     3e-100
IGHD1-1*01                                                                                            12.2    32    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGGACCTTTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGGACCTTTCCCTAC	GRKTTCPPGDLSL	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	30	30	29	0	1	96.7
CDR1-IMGT	31	54	24	21	3	0	87.5
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	129	24	23	1	0	95.8
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	241	9	1	96


Alignments

                                      <----------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT-------
                                         S  L  R  L  S  L  C  S  L  W  N  H  L  Y  H  L  C  R  E  L  G  P  P  G  S  R  E  G  A  
                    Query_7029   1    GGTCCCTGAGACTCTCCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCGTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTG  90
V  96.0% (241/251)  IGHV3-23*01  47   .................-...............T.........G..G.......A...................................  135
                                         S  L  R  L  S   C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L 

                                      --------------><-------CDR2-IMGT------><--------------------------------------------------
                                      G  V  G  L  S  H  *  W  W  W  W  *  H  I  L  R  R  L  R  E  G  P  V  H  H  L  Q  R  Q  F  
                    Query_7029   91   GAGTGGGTCTCAGCCATTAGTGGTGGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCG  180
V  96.0% (241/251)  IGHV3-23*01  136  ..............T.........A......................................................G.........C  225
                                       E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                      E  E  H  A  V  S  A  N  E  Q  P  E  S  R  G  H  G  R  I  L  L  C  G  R  K  T  T  C  P  P  
                    Query_7029   181  AAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGG  270
V  96.0% (241/251)  IGHV3-23*01  226  ..................................................................A....-------------------  296
                                       K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                      
D  100.0% (6/6)     IGHD1-1*01   12   -------------------------------------------------------------------------......-----------  17

                                      -------------->                                  
                                      G  D  L  S  L  L  G  P  G  N  P  G  H  R  L  L   
                    Query_7029   271  GGGACCTTTCCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (38/38)   IGHJ4*02     11   -----------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_212886

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTCTGTG	AGCAGTGCCTGGT	CGTTTGGTCCCCCCCCACGACTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCTGTGAGCAGTGCCTGGTCGTTTGGTCCCCCCCCACGACTCTACTACCTCGACTGC	ARHSVSSAWSFGPPPRLYYLDC	250	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	135	27	21	0	6	77.8
FR3-IMGT	136	249	114	108	6	0	94.7
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	243	8	6	94.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  H  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_7030   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGCAGTTACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.6% (243/257)  IGHV4-39*01  49   ...............................................T......T...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  N  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D 
                    Query_7030   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCAACACCAACTACAACCCGTCCCTCAAGAGTCGAGTAACCATGTCCGTAGAC  180
V  94.6% (243/257)  IGHV4-39*01  139  ...................................------....T............................C.....A.........  222
                                       L  E  W  I  G  S  I  Y  Y  S  G  S        T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------------
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  T  Y  Y  C  A  R  H  S  V  S  S 
                    Query_7030   181  ACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGAGCGCCGCAGACACGGCTACGTATTACTGTGCGAGACATTCTGTGAGCAGT  270
V  94.6% (243/257)  IGHV4-39*01  223  ........................................C................GT..................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  92.3% (12/13)    IGHD6-19*01  7    ------------------------------------------------------------------------------------......  12

                                      --------CDR3-IMGT--------------------------->                                  
                                       A  W  S  F  G  P  P  P  R  L  Y  Y  L  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7030   271  GCCTGGTCGTTTGGTCCCCCCCCACGACTCTACTACCTCGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  349
D  92.3% (12/13)    IGHD6-19*01  13   .G.....------------------------------------------------------------------------  19
J  93.8% (45/48)    IGHJ4*02     1    -------------------------------.....T.T....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_212887

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           357     1e-100
IGHD3-10*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAA	ATGGTTCGGG	ACTGGTGGGATAGTGAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAAATGGTTCGGGACTGGTGGGATAGTGAATTTGACTAC	AKDKMVRDWWDSEFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  I  W  V  R  Q  A  P  G  K  G  L  
                    Query_7031   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTTAGCAACTATGCCATGATCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-23*01  47   ............................T................G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  S  A  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7031   91   AGTGGGTCTCAGGTATTAGTGGTAGTGGTGGGAGCGCATATTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  95.6% (239/250)  IGHV3-23*01  137  ............C..................T...A....C............................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  A  D  T  A  V  Y  Y  C  A  K  D  K  M  V  R  D  W  
                    Query_7031   181  AAAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGCGGACACGGCCGTCTATTACTGTGCGAAAGATAAAATGGTTCGGGACTGGT  270
V  95.6% (239/250)  IGHV3-23*01  227  .G.....................................A............A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-10*01  9    --------------------------------------------------------------------------..........------  18

                                      T------------------>                                  
                                      W  D  S  E  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7031   271  GGGATAGTGAATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (43/43)   IGHJ4*02     6    -----------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_212884

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  N  N  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7032   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-23*01  47   .....................C....................G..G.T.....A....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  L  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_7032   91   AGTGGGTCTCAGCGATTCTTGGGAGCGGTAGTAGCACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  .............T...AG...T..T...G..............G......................................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_7032   181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  93.2% (233/250)  IGHV3-23*01  227  ...............................G....................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7032   271  ATTCACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_269875

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         380     1e-107
IGHD3-16*01                                                                                           12.2    34    
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	ATTATG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATGACTACTTTGACTAC	ARHYDYFDY	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  R  G  F  G  Y  S  F  T  S  F
                    Query_7033     1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGTTTTGGATACAGCTTTACCAGCTT  90
V  92.0% (266/289)  IGHV5-10-1*01  6    ....................C.........................................A.....C....................A  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  F  D  S  S  T  D  Y  T  P
                    Query_7033     91   CTGGATCACTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAGAATTGATCCTTTTGACTCTTCTACCGACTATACGCC  180
V  92.0% (266/289)  IGHV5-10-1*01  96   ........GC.........................................G..G.........AG........A....A....C.GC..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  L  Q  G  H  V  T  I  S  A  D  N  S  I  I  T  A  Y  L  H  L  S  S  L  K  A  S  D  T  G
                    Query_7033     181  GTCACTCCAAGGCCACGTCACCATCTCAGCTGACAACTCCATCATTACTGCCTACCTGCACTTGAGCAGCCTGAAGGCCTCGGACACCGG  270
V  92.0% (266/289)  IGHV5-10-1*01  186  ...CT...............................G.......GC..............G.G..........................C  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------CDR3-IMGT-------->                                  
                                          M  Y  Y  C  A  R  H  Y  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7033     271  CATGTATTACTGTGCGAGACATTATGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  344
V  92.0% (266/289)  IGHV5-10-1*01  276  ...................-------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                        
D  100.0% (6/6)     IGHD3-16*01    3    --------------------......------------------------------------------------  8
J  100.0% (48/48)   IGHJ4*02       1    --------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_269874

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           353     9e-100
IGHD2-15*01                                                                                           12.2    32    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAT	TAGCTG	TATCCGCGCCCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTAGCTGTATCCGCGCCCTACTACTTTGACTAC	ARRLAVSAPYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  T  N  S  N  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_7034   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCACCAATAGTAATTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.2% (238/250)  IGHV4-39*01  49   ...............................G........G..G.....G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7034   91   CTGGAGTGGATTGCGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  95.2% (238/250)  IGHV4-39*01  139  .............G..................................................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  V  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  R  L  A  V  S  A  P 
                    Query_7034   181  AAGAACCAGTTCTCCCTGAGGGTGACCTCTGTGACCGCCGCAGACACGGCTCTATATTACTGTGCGAGACGATTAGCTGTATCCGCGCCC  270
V  95.2% (238/250)  IGHV4-39*01  229  ...................A.C...G.........................G.G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-15*01  19   -------------------------------------------------------------------------......-----------  24

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  S  L  V  A  V  S  S  
                    Query_7034   271  TACTACTTTGACTACTGGGGCCAGGGATCCCTGGTCGCCGTCTCCTCAG  319
J  95.8% (46/48)    IGHJ4*02     1    -..........................A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_212888

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            364     5e-103
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GTTCA	TACTATGATAATAGTGGTTAT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGTTCATACTATGATAATAGTGGTTATGACTACTATTACGGTATGGACGTC	AKGSYYDNSGYDYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7035   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGAGGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.8% (241/249)  IGHV3-9*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  N  L  G  Y  A  Y  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_7035   91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAACTTAGGCTATGCGTACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAGCGCCA  180
V  96.8% (241/249)  IGHV3-9*01   137  .................................G.A...........G................A...................A.....  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  K  P  E  D  T  A  L  Y  Y  C  A  K  G  S  Y  Y  D  N  S  
                    Query_7035   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAAACCTGAGGACACGGCCTTGTATTACTGTGCAAAAGGTTCATACTATGATAATAGTG  270
V  96.8% (241/249)  IGHV3-9*01   227  .................................G.G.................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  95.2% (20/21)    IGHD3-22*01  5    --------------------------------------------------------------------------..........G.....  20

                                      -IMGT----------------------->                                 
                                      G  Y  D  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7035   271  GTTATGACTACTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  95.2% (20/21)    IGHD3-22*01  21   .....---------------------------------------------------------  25
J  98.2% (55/56)    IGHJ6*02     7    ------.......C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_212889

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           293     2e-81
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	215	28	0	88.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_7036   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAGT  93
V  88.5% (215/243)  IGHV4-59*01  50   .....TCC...A....C....................C...A..T.........GC....................G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N  
                    Query_7036   94   GGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAATC  183
V  88.5% (215/243)  IGHV4-59*01  140  .......G...A.........G.................A..C.......A.....................TA...A..........C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P  
                    Query_7036   184  AGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCCT  273
V  88.5% (215/243)  IGHV4-59*01  230  ..........G...C....C...........T............G.G....A...........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD7-27*01  4    ----------------------------------------------------------------........------------------  11
J  95.7% (44/46)    IGHJ5*02     6    -----------------------------------------------------------------------------.............  18

                                                                       
                                      W  G  Q  G  A  L  V  S  V  S  S  
                    Query_7036   274  GGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  306
J  95.7% (44/46)    IGHJ5*02     19   ...........A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_269871

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           380     1e-107
IGHD5-18*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	GGATACACCTATGGT	CA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGATACACCTATGGTCATGACTAC	AREGYTYGHDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  F  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  G  P  F  S  S  Y
                    Query_7037   1    GCAGCTGGTGCAGTCTGGAGCCGAGTTTAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGCAAGGCCTCTGGCGGCCCCTTCAGCAGTTA  90
V  91.8% (267/291)  IGHV1-69*01  6    ..................G..T...G.G......................A...............T.....A...A..........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  I  R  Q  A  P  G  L  G  L  E  W  M  G  G  I  I  P  I  L  G  P  A  N  Y  A  V
                    Query_7037   91   CGCTATTAGCTGGATTCGACAGGCCCCTGGACTAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCCTTGGTCCAGCAAACTACGCAGT  180
V  91.8% (267/291)  IGHV1-69*01  96   T.....C......G.G................A..................................T.....A..............CA  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  L  E  V  K  S  L  R  S  E  D  T  A
                    Query_7037   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACTTGGAGGTGAAAAGCCTGCGATCTGAGGACACGGC  270
V  91.8% (267/291)  IGHV1-69*01  186  .......................................................A.....C...GC......A................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                
                                        V  Y  Y  C  A  R  E  G  Y  T  Y  G  H  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7037   271  CGTGTATTATTGTGCGAGAGAAGGATACACCTATGGTCATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  348
V  91.8% (267/291)  IGHV1-69*01  276  .........C...........---------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                            
D  93.3% (14/15)    IGHD5-18*01  3    ----------------------.......G.......-----------------------------------------  17
J  100.0% (39/39)   IGHJ4*02     8    ---------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_269870

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHD3-16*01                                                                                           10.3    116  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGACGAGGGGCA	GGGGG	CGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGACGAGGGGCAGGGGGCGGTTGACTCT	ARVDEGQGAVDS	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  K  V  S  G  G  S  I  T  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7038   1    ACCCTGTCCCTCACCTGCAAGGTCTCTGGGGGCTCCATCACGACTTACTACTGGAGTTGGATCCGACAGCCCCCAGGGAAGGGACTGGAG  90
V  92.2% (225/244)  IGHV4-59*01  49   ...................CT........T..........GT.G............C........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  V  N  R  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_7038   91   TGGATTGGGTATATCTATTACACTGGCAGTGTCAACCGCAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*01  139  ......................G...G..CAC....TA..............................A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  D  E  G  Q  G  A  V  D 
                    Query_7038   181  CAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTTGACGAGGGGCAGGGGGCGGTTGAC  270
V  92.2% (225/244)  IGHV4-59*01  229  ...............C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -----------------------------------------------------------------------------.....--------  22
J  92.9% (39/42)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7038   271  TCTTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  307
J  92.9% (39/42)    IGHJ4*02     12   .AC.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_269873

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7039   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7039   91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_7039   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  95.5% (231/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7039   271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_144318

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           350     9e-99
IGHD3-16*02                                                                                           31.5    5e-05
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCC	ATGATCACGTCTGGGGGAGTCATCG	AGAGGT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATATCCATGATCACGTCTGGGGGAGTCATCGAGAGGTCTACTACGGTATGGACGTC	AKDIHDHVWGSHREVYYGMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  I  Y  G  M  H  W  A  R  Q  A  P  G  K  G  L  
                    Query_7040   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAATATCTATGGCATGCACTGGGCCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-30*18  47   .....................................C....G..G.................T..........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  E  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7040   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTAATGAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (237/250)  IGHV3-30*18  137  ...................................A.................................................TT...  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  S  V  H  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  I  H  D  H  V  W  
                    Query_7040   181  AAAACTCGGTGCATCTGGAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTTTATTACTGTGCGAAAGATATCCATGATCACGTCTGGG  270
V  94.8% (237/250)  IGHV3-30*18  227  .G...A..C..T.....C..................................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.0% (22/25)    IGHD3-16*02  6    ---------------------------------------------------------------------------.....T....T....  20

                                      DR3-IMGT-------------------------->                              
                                      G  S  H  R  E  V  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_7040   271  GGAGTCATCGAGAGGTCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  335
D  88.0% (22/25)    IGHD3-16*02  21   .....T....-------------------------------------------------------  30
J  100.0% (49/49)   IGHJ6*02     11   ----------------.................................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_144319

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           315     5e-88
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCATCATGC	AGCAGTGGGTGG	CT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATCATGCAGCAGTGGGTGGCTACTACTTTGACTAC	ARHHAAVGGYYFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	224	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  L  N  T  Y  T  I  G  W  V  R  K  A  P  G  K  G  L  
                    Query_7041   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCCTCAACACCTATACTATAGGTTGGGTCCGCAAGGCTCCAGGGAAGGGGCTGG  90
V  90.7% (224/247)  IGHV3-21*01  47   .....................C................T...GT.G.....GC..GAAC.........C.....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  L  Y  I  Y  Y  S  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_7041   91   AGTGGGTCTCATCTATCAGTAGTAGTAGTCTTTATATATATTACTCAGATTCAGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.7% (224/247)  IGHV3-21*01  137  .............C..T............AG...C.....C...G....C.......A................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  S  L  H  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  H  H  A  A  V  G  G  
                    Query_7041   181  AGAACTCACTGTCTCTGCATATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGCATCATGCAGCAGTGGGTGGCT  270
V  90.7% (224/247)  IGHV3-21*01  227  ............A......A...............................................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  91.7% (11/12)    IGHD6-19*01  7    ----------------------------------------------------------------------------........C...--  18

                                      ------------->                                  
                                      Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7041   271  ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (48/48)   IGHJ4*02     1    ................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_144314

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           343     2e-96
IGHD2-21*01                                                                                           10.3    123  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTC	GTGAT	CGGTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCGTGATCGGTGACTACTTTGACCAA	ARHVVIGDYFDQ	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  D  A  S  I  S  S  S  R  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_7042   1    ACCCTGTCCCTCACCTGCACTGTCTCTGATGCCTCCATCAGCAGTAGTAGATACTATTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.6% (235/251)  IGHV4-39*01  49   ............................G..G..................T.....C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  H  I  G  S  T  F  Y  K  Q  S  L  K  T  R  V  T  I  S  I  D  S  S 
                    Query_7042   91   CTGGAGTGGATTGGGAGTATTTATCATATTGGGAGCACCTTCTACAAACAGTCCCTCAAGACTCGAGTCACCATATCCATAGACTCGTCC  180
V  93.6% (235/251)  IGHV4-39*01  139  ....................C...T...G...........A......C.C...........G................G.....A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  H  V  V  I  G  D  Y 
                    Query_7042   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTATATATTACTGTGCGAGACATGTCGTGATCGGTGACTAC  270
V  93.6% (235/251)  IGHV4-39*01  229  ...................A...............................G.G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD2-21*01  15   ---------------------------------------------------------------------------.....----------  19
J  95.8% (46/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7042   271  TTTGACCAATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  95.8% (46/48)    IGHJ4*02     6    ......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_144315

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            333     1e-93
IGHD3-3*02                                                                                            12.2    31   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTT	GCATTT	CGATCTCCCACGAGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGCATTTCGATCTCCCACGAGGCATGGACGTC	ARLHFDLPRGMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  T  Y  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_7043  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGGGGCTCCATCACCAGTACTTACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  93.5% (229/245)  IGHV4-4*01  49   ..................G....C.....T..........G.....G.A.........G...........................G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  S  G  S  P  H  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_7043  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCCCCCACTACAGTCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  93.5% (229/245)  IGHV4-4*01  139  .................................A..A......AC.............................................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                      N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  W  C  A  R  L  H  F  D  L  P  R  G 
                    Query_7043  181  AACCAGTTCTCCCTGAAGTTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTGGTGTGCGAGGTTGCATTTCGATCTCCCACGAGGC  270
V  93.5% (229/245)  IGHV4-4*01  229  ..................C....C.............................T..C........-------------------------  293
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  100.0% (6/6)     IGHD3-3*02  7    --------------------------------------------------------------------......----------------  12

                                     -------->                                 
                                      M  D  V  W  G  Q  G  T  T  A  I  V  S  S 
                    Query_7043  271  ATGGACGTCTGGGGCCAAGGGACCACGGCCATCGTCTCCTCA  312
J  95.2% (40/42)    IGHJ6*02    21   ............................T..C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_144310

Length=413
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           416     2e-118
IGHD3-3*01                                                                                            16.1    2.7   
IGHJ5*02                                                                                              75.7    7e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGTTCTA	ACGACTTTTGG	GGTTATTAGGGAGGATTTTG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGTTCTAACGACTTTTGGGGTTATTAGGGAGGATTTTGACTGGCTCGACGCC	ARDPVLTTFGVIREDFDWLDA	292	354	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	71	4	0	94.7
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	281	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  T  F  T 
                    Query_7044   4    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGACATCTGGATACACCTTCACC  93
V  94.9% (281/296)  IGHV1-46*01  1    .....G.....G...........G.............................................G....................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  F  Y  L  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  N  Y 
                    Query_7044   94   ACCTTCTATTTACACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAACTAC  183
V  94.9% (281/296)  IGHV1-46*01  91   .G..A....A.G.........................................................................G....  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  D  R  V  T  M  T  S  D  T  S  T  S  T  V  Y  V  E  L  S  S  L  R  S  E  D 
                    Query_7044   184  GCACAGAAGTTCCAGGACAGAGTCACCATGACCAGTGATACGTCCACGAGCACAGTCTATGTGGAGCTGAGCAGCCTGAGATCTGAGGAC  273
V  94.9% (281/296)  IGHV1-46*01  181  ................G..................G..C....................CA.............................  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------------------CDR3-IMGT-------------------------->         
                                       T  A  V  D  Y  C  A  R  D  P  V  L  T  T  F  G  V  I  R  E  D  F  D  W  L  D  A  W  G  Q 
                    Query_7044   274  ACGGCCGTGGATTACTGTGCGAGAGATCCAGTTCTAACGACTTTTGGGGTTATTAGGGAGGATTTTGACTGGCTCGACGCCTGGGGCCAG  363
V  94.9% (281/296)  IGHV1-46*01  271  .........T................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  90.9% (10/11)    IGHD3-3*01   6    ------------------------------------....T......-------------------------------------------  16
J  93.8% (45/48)    IGHJ5*02     4    -------------------------------------------------------------------.....T.....C...........  26

                                                               
                                       G  T  L  V  T  V  S  S  
                    Query_7044   364  GGAACCCTTGTCACCGTCTCCTCAG  388
J  93.8% (45/48)    IGHJ5*02     27   ........G................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40498920


Query= Query_144311

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           304     1e-84
IGHD2-8*01                                                                                            14.1    8.8  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGGAGGGGGCTGCGGGAA	TGTACTA	TAACGGACGGCGGGGAATC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGGAGGGGGCTGCGGGAATGTACTATAACGGACGGCGGGGAATCATGGACGTC	ARLEGAAGMYYNGRRGIMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	221	27	0	89.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  R  N  T  D  F  W  V  W  I  R  Q  P  P  G  K  G 
                    Query_7045   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGGAATACTGACTTCTGGGTCTGGATACGTCAGCCCCCCGGGAAGGGG  90
V  89.1% (221/248)  IGHV4-39*01  49   .........................................C..T.G..G.T...A.....G......C..C........A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  A  I  H  Y  T  G  S  T  Y  Y  N  S  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7045   91   CTGGAGTGGATTGGGGCTATCCATTATACTGGGAGCACCTATTACAACTCGTCCCTCAAGAGTCGAGTCACCATCTCCGTGGACACGTCC  180
V  89.1% (221/248)  IGHV4-39*01  139  ...............AG....T......G............C......C.........................A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  T  D  T  S  V  F  Y  C  A  R  L  E  G  A  A  G  M 
                    Query_7045   181  AAGAACCAGTTCTCCCTGAACCTAAGGTCCGTGACCGCCACAGACACGTCTGTTTTCTACTGTGCGAGGCTGGAGGGGGCTGCGGGAATG  270
V  89.1% (221/248)  IGHV4-39*01  229  ....................G..G..C..T.........G........G....G.AT...........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD2-8*01   8    ----------------------------------------------------------------------------------------..  9

                                      DR3-IMGT------------------------>                                 
                                       Y  Y  N  G  R  R  G  I  M  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_7045   271  TACTATAACGGACGGCGGGGAATCATGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  336
D  100.0% (7/7)     IGHD2-8*01   10   .....-------------------------------------------------------------  14
J  97.6% (41/42)    IGHJ6*02     21   ------------------------........................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_144312

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           419     2e-119
IGHD5-18*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	GTGGACACACCTATGG	AGCCCGAACCGACCCCCATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGGACACACCTATGGAGCCCGAACCGACCCCCATCTTGACTAC	ARRGHTYGARTDPHLDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  I  F  R  T  Y
                    Query_7046   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACATCTTTAGAACCTA  90
V  96.2% (279/290)  IGHV5-51*01  6    ....................C.............................A..........................G.....CC.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_7046   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.2% (279/290)  IGHV5-51*01  96   ........G.................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  H  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7046   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACCACTCCATTAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (279/290)  IGHV5-51*01  186  ..................................A.G.....C...............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  A  R  R  G  H  T  Y  G  A  R  T  D  P  H  L  D  Y  W  G  Q  G  T  L  V  S  V
                    Query_7046   271  CATATATTACTGTGCGAGACGTGGACACACCTATGGAGCCCGAACCGACCCCCATCTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGT  360
V  96.2% (279/290)  IGHV5-51*01  276  ...G................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  87.5% (14/16)    IGHD5-18*01  1    --------------------.....T...G......------------------------------------------------------  16
J  97.6% (41/42)    IGHJ4*02     7    --------------------------------------------------------.............................A....  40

                                              
                                        S  S  
                    Query_7046   361  CTCCTCAG  368
J  97.6% (41/42)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_226584

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           280     1e-77
IGHD6-25*01                                                                                           18.0    0.59 
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTG	GCAGCGGCT	GCCACGAACTTCTATCACGACGAAC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCTGGCAGCGGCTGCCACGAACTTCTATCACGACGAACTGGACGTC	VRDLAAAATNFYHDELDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	13	8	0	61.9
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	212	33	0	86.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  P  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7047   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCCCTGGCTTCTACTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  86.5% (212/245)  IGHV4-59*01  49   .............................T.........AG.A.T.A...........................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  F  Y  Y  N  G  E  S  N  Y  N  P  S  L  K  S  R  V  S  I  S  L  D  M  S  K  S 
                    Query_7047   91   TGGATTGGCCACTTCTACTACAATGGCGAGTCCAACTACAATCCCTCCCTCAAGAGTCGAGTCTCCATTTCTCTGGACATGTCCAAGAGT  180
V  86.5% (212/245)  IGHV4-59*01  139  ........GT.TA....T....G...GAGCA..........C.....................A....A..AG.A....C........AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  F  T  S  V  T  A  A  D  T  A  V  Y  F  C  V  R  D  L  A  A  A  A  T  N  F 
                    Query_7047   181  CAGTTCTCCCTGAAGTTCACTTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGTGAGAGATCTGGCAGCGGCTGCCACGAACTTC  270
V  86.5% (212/245)  IGHV4-59*01  229  ...............C.G.GC...............................A.....C......-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-25*01  8    ---------------------------------------------------------------------.........------------  16

                                      -------------------->                                 
                                       Y  H  D  E  L  D  V  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_7047   271  TATCACGACGAACTGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTCA  324
J  97.6% (40/41)    IGHJ6*02     22   -------------........................C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_187759

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           343     2e-96
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATGG	GGTTCGAGGA	CACTCGACCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTTCGAGGACACTCGACCGTTTTTGATATC	ARDGVRGHSTVFDI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	231	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  N  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7048   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTAACTCTTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (231/243)  IGHV4-59*08  49   ........................................G....T...AC.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_7048   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTATAATCCCTCCCTTAAGAGTCGGGTCACCATATCAATAGACACGTCCAAGAAC  180
V  95.1% (231/243)  IGHV4-59*08  139  ......................................C..C........C........A............G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  V  R  G  H  S  T  V 
                    Query_7048   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGATGGGGTTCGAGGACACTCGACCGTT  270
V  95.1% (231/243)  IGHV4-59*08  229  ....................C........C.......................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD3-10*01  11   --------------------------------------------------------------------......G...------------  20
J  93.2% (41/44)    IGHJ3*02     7    -----------------------------------------------------------------------------------------.  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  T  I  I  V  S  S  
                    Query_7048   271  TTTGATATCTGGGGCCAAGGGACAACGATCATCGTCTCTTCAG  313
J  93.2% (41/44)    IGHJ3*02     8    .........................T.G...C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_77438

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           338     4e-95
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GTTAGGGGGAG	AGGACTAATGGGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTAGGGGGAGAGGACTAATGGGGGGACTACCTTGACCGC	ARLGGED*WGDYLDR	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	229	13	0	94.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  E  K  G  L  E 
                    Query_7049   1    ACCCTGTCCCTCACCTGCACTGTGTCTAGTGGCTCCATCAGCAGTTACTACTGGAGTTGGATCCGGCAGTCCCCAGAGAAGGGACTGGAG  90
V  94.6% (229/242)  IGHV4-59*08  49   .......................C...G.............T..............C............C......G.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  E  N 
                    Query_7049   91   TGGATTGGATATATCAACTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCGAGAAC  180
V  94.6% (229/242)  IGHV4-59*08  139  ........G......T.T..................................................................A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  G  G  E  D  *  W  G  D 
                    Query_7049   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCCTGTATTATTGTGCGAGGTTAGGGGGAGAGGACTAATGGGGGGAC  270
V  94.6% (229/242)  IGHV4-59*08  229  ...................G.........................G.......C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (10/11)    IGHD3-16*01  14   --------------------------------------------------------------...T.......-----------------  24
J  93.8% (45/48)    IGHJ4*02     1    ----------------------------------------------------------------------------------------..  2

                                      ----------->                                  
                                       Y  L  D  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7049   271  TACCTTGACCGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  93.8% (45/48)    IGHJ4*02     3    ...T.....TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_226585

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           325     3e-91
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	N/A	AGCGAGGGCCTGCCTGGCACAC	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCGAGGGCCTGCCTGGCACACTGCTTTTGATATC	AKRGPAWHTAFDI	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	243	4	4	0	0	100
Total	N/A	N/A	240	224	16	0	93.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  N  S  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_7050   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAATTCGTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.3% (224/240)  IGHV4-59*08  50   .....TCC...A..............................G..AC.......G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  F  N  S  G  N  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_7050   94   GGATTGGGTATATCTTTAACAGTGGGAACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  93.3% (224/240)  IGHV4-59*08  140  ...............A.T.........G.......................A......................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  R  G  P  A  W  H  T  A  F  
                    Query_7050   184  AGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTATATTATTGTGCGAAGCGAGGGCCTGCCTGGCACACTGCTTTTG  273
V  93.3% (224/240)  IGHV4-59*08  230  .............G....G...........................G.....C.......------------------------------  289
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
J  100.0% (47/47)   IGHJ3*02     4    ----------------------------------------------------------------------------------........  11

                                      ---->                                  
                                      D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7050   274  ATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  312
J  100.0% (47/47)   IGHJ3*02     12   .......................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_77435

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           307     1e-85
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	AGCT	CGATTTTTGGACTGGTTATT	TTAGGTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAAGCTCGATTTTTGGACTGGTTATTTTAGGTAACTTTGACTAC	AGSSIFGLVILGNFDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	102	12	0	89.5
CDR3-IMGT (germline)	246	251	6	5	1	0	83.3
Total	N/A	N/A	248	222	26	0	89.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  P  I  S  S  S  A  Y  Y  W  G  W  I  R  Q  S  P  G  K  G  
                    Query_7051   4    CCCTGAGACTCTCCTGTACTGTCTCTGGAGGCCCCATCAGTAGCAGTGCTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGGC  93
V  89.5% (222/248)  IGHV4-39*01  50   .....TCC...A....C...........T...T.......C..T...AG.........................C...............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  Y  S  G  N  T  Y  Y  N  P  S  L  R  S  R  L  H  M  S  V  D  T  S  
                    Query_7051   94   TGGAGTGGATTGGGAGTATCTATTATAGTGGGAACACCTACTATAATCCGTCCCTCAGGAGTCGACTCCACATGTCCGTAGACACTTCTA  183
V  89.5% (222/248)  IGHV4-39*01  140  .................................G.........C..C..........A.......G..AC...A...........G..C.  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  I  F  G  L  V  
                    Query_7051   184  AGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCAGACACGGCTGTTTATTACTGTGCGGGAAGCTCGATTTTTGGACTGGTTA  273
V  89.5% (222/248)  IGHV4-39*01  230  ..................A.....G...........................G............A..----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  95.0% (19/20)    IGHD3-3*01   7    ------------------------------------------------------------------------...........G......  24

                                      T------------------>                                  
                                      I  L  G  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7051   274  TTTTAGGTAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  327
D  95.0% (19/20)    IGHD3-3*01   25   ..----------------------------------------------------  26
J  97.8% (44/45)    IGHJ4*02     4    ---------..................................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_77434

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            414     5e-118
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CACA	TACTATCCTTCGGGGAGTT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATACTATCCTTCGGGGAGTTTACTACGGTATGGACGTC	ARAHTILRGVYYGMDV	273	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	30	0	0	100
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	24	3	0	88.9
FR3-IMGT	159	272	114	112	2	0	98.2
CDR3-IMGT (germline)	273	279	7	6	1	0	85.7
Total	N/A	N/A	279	272	7	0	97.5


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  M  S  G  D  S  V  S  S  N  S  A  A  W  N  W  
                    Query_7052   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATGTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGA  90
V  97.5% (272/279)  IGHV6-1*01   26   ..............................................C...........................................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  R  W  Y  T  D  Y  A  V  S  V  K  
                    Query_7052   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCGAGGTGGTATACTGATTATGCAGTCTCTGTGAAAA  180
V  97.5% (272/279)  IGHV6-1*01   116  .......................................................C.A........A............A..........  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_7052   181  GTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTCTATTACT  270
V  97.5% (272/279)  IGHV6-1*01   206  ..................................................................................G.......  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-------------------CDR3-IMGT------------------>                                 
                                      C  A  R  A  H  T  I  L  R  G  V  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7052   271  GTGCGAGAGCACATACTATCCTTCGGGGAGTTTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  353
V  97.5% (272/279)  IGHV6-1*01   296  ....A....--------------------------------------------------------------------------  304
                                      C  A  R                                                                            
D  89.5% (17/19)    IGHD3-10*01  5    -------------......GG...........---------------------------------------------------  23
J  100.0% (51/51)   IGHJ6*02     12   --------------------------------...................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_187757

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           291     6e-81
IGHD2-21*02                                                                                           14.1    8.9  
IGHJ3*02                                                                                              39.1    6e-07


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGAGTCTTGGACCT	TGGTGAC	GGTCACTTCCACCAGATAGGTGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGAGTCTTGGACCTTGGTGACGGTCACTTCCACCAGATAGGTGTTTTTGACAAG	ARDGVLDLGDGHFHQIGVFDK	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  T  S  G  F  T  F  D  T  Y  G  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_7053   1    GGTCCCTGAGACTCTCCTGTACAACGTCTGGATTCACCTTCGACACCTATGGCATGTATTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  87.2% (218/250)  IGHV3-33*01  47   ....................G..G.................AGT.G..........C.C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  W  H  D  G  S  Q  R  F  Y  G  D  S  V  K  G  R  F  S  V  S  R  D  N  S  
                    Query_7053   91   AGTGGGTGGCAAGTATTTGGCATGATGGAAGCCAGAGGTTCTATGGAGACTCTGTGAAGGGCCGATTCTCCGTCTCCAGAGACAACTCCA  180
V  87.2% (218/250)  IGHV3-33*01  137  ...........GT...A...T..........TA.T.AA.A.....C......C...............A..A.............T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  G  R  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  V  L  D  L  G  
                    Query_7053   181  AGAACACATTGTACTTGCAAATGGGCAGACTTAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGATGGAGTCTTGGACCTTGGTG  270
V  87.2% (218/250)  IGHV3-33*01  227  .......GC....TC........AA...C..G....................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-21*02  13   -------------------------------------------------------------------------------------.....  17

                                      DR3-IMGT-------------------------->                                  
                                      D  G  H  F  H  Q  I  G  V  F  D  K  C  G  Q  G  T  L  V  T  V  S  S  
                    Query_7053   271  ACGGTCACTTCCACCAGATAGGTGTTTTTGACAAGTGTGGCCAAGGGACATTGGTGACTGTTTCTTCAG  339
D  100.0% (7/7)     IGHD2-21*02  18   ..-------------------------------------------------------------------  19
J  81.8% (36/44)    IGHJ3*02     7    -------------------------......T.TC..G............A....C..C..C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_77430

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         366     2e-103
IGHD2-15*01                                                                                           18.0    0.64  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCACCTT	TATTGTAGT	TATGCCAGTATCGGCTGCTTGACCGGATGTTGCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGACCACCTTTATTGTAGTTATGCCAGTATCGGCTGCTTGACCGGATGTTGCCACTACTACGGTATGGACGTC	VRDHLYCSYASIGCLTGCCHYYGMDV	241	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	248	8	7	1	0	87.5
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  V  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_7054     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCGTCAGCAGTGGTTACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  97.2% (241/248)  IGHV4-38-2*02  49   ..................A.................A.....................................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 
                    Query_7054     91   GAGTGGATTGGGAGTATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAG  180
V  97.2% (241/248)  IGHV4-38-2*02  139  .......................................................................A..................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------------------
                                         N  Q  F  S  L  N  L  R  S  M  T  A  A  D  T  A  V  Y  Y  C  V  R  D  H  L  Y  C  S  Y  A 
                    Query_7054     181  AACCAGTTCTCCCTGAACCTGAGGTCTATGACCGCCGCAGACACGGCCGTGTATTACTGTGTGAGAGACCACCTTTATTGTAGTTATGCC  270
V  97.2% (241/248)  IGHV4-38-2*02  229  .................G.....C...G.................................C......----------------------  296
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD2-15*01    5    ---------------------------------------------------------------------------.........------  13

                                        -----CDR3-IMGT--------------------------------->                                 
                                         S  I  G  C  L  T  G  C  C  H  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7054     271  AGTATCGGCTGCTTGACCGGATGTTGCCACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  351
J  100.0% (53/53)   IGHJ6*02       10   ----------------------------.....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_187753

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           336     1e-94
IGHD1-7*01                                                                                            12.2    31   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	TCGGGGTGGGG	GGAACT	CGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGATCGGGGTGGGGGGAACTCGGGGACTACTTTGACTAC	ARSGWGELGDYFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	245	230	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  R  L  
                    Query_7055   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGAGGCTGG  90
V  93.9% (230/245)  IGHV3-53*01  47   ...................................................................................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  S  I  F  S  N  G  N  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_7055   91   AGTGGGTCTCAAGCATTTTTAGTAATGGTAACACATACTACACAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.9% (230/245)  IGHV3-53*01  137  ...........GTT....A...CGG.....G..........G................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  V  Y  L  Q  V  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  G  W  G  E  L  G  D  
                    Query_7055   181  ACACGGTGTATCTTCAGGTGCACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCAAGATCGGGGTGGGGGGAACTCGGGGACT  270
V  93.9% (230/245)  IGHV3-53*01  227  .....C..........AA..A........................................G...-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (6/6)     IGHD1-7*01   10   ----------------------------------------------------------------------------......--------  15
J  95.8% (46/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  F  D  Y  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_7055   271  ACTTTGACTACTGGGGCCAGGGATCCCTGGTCATCGTCTCCTCAG  315
J  95.8% (46/48)    IGHJ4*02     4    .......................A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_187752

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           305     3e-85
IGHD2-8*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	N/A	GATATTGTACCAGTGGT	CCATGCCCCGCCTTGGGTA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TTGACAGGATATTGTACCAGTGGTCCATGCCCCGCCTTGGGTAAC	LTGYCTSGPCPALGN	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	249	7	4	3	0	57.1
Total	N/A	N/A	249	222	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  T  N  Y  V  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7056   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTACCAACTATGTCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.2% (222/249)  IGHV3-23*01  47   ....................................C.....G..G.....C.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  E  T  G  G  V  T  V  Y  A  D  S  V  K  G  R  V  T  I  S  R  D  N  P  
                    Query_7056   91   AGTGGGTCTCAGTCATTAGTGAGACTGGTGGTGTCACAGTCTACGCGGATTCCGTGAAGGGCCGGGTCACCATCTCCAGAGACAATCCCA  180
V  89.2% (222/249)  IGHV3-23*01  137  ............CT.......GT.G.......AG....TA......A..C...............T....................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  V  F  L  Q  L  N  S  L  R  D  E  D  T  A  V  Y  Y  C  L  T  G  Y  C  T  S  G  P  
                    Query_7056   181  AGAACACGGTGTTTTTGCAATTGAACAGCCTGAGAGACGAGGACACGGCCGTTTATTACTGTTTGACAGGATATTGTACCAGTGGTCCAT  270
V  89.2% (222/249)  IGHV3-23*01  227  ........C...A.C.....A...............C...............A.........GC..A..---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.2% (15/17)    IGHD2-8*01   3    ---------------------------------------------------------------------..........T.A....----  19

                                      ---------------->                                  
                                      C  P  A  L  G  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7056   271  GCCCCGCCTTGGGTAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (36/36)   IGHJ4*02     13   ---------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_157932

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           307     1e-85
IGHD2-15*01                                                                                           10.3    121  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGGAGA	GTAGC	GGGGGCTTCAAT	GGTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGGAGAGTAGCGGGGGCTTCAATGGTTTGGACGTC	AREKESSGGFNGLDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  R  S  H  G  V  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_7057   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGGTTCAGAAGTCATGGCGTGTATTGGGTCCGCCAGGCACCAGGCAAGGGGCTGG  90
V  89.2% (223/250)  IGHV3-33*01  47   ....................................CC.....T..CT.....A..C.C..............T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  F  D  G  S  T  K  Y  Y  G  D  A  V  Q  G  R  F  T  I  S  R  D  N  F  
                    Query_7057   91   AGTGGGTGGCAGTTATATGGTTTGATGGAAGTACGAAATACTATGGAGACGCCGTGCAGGGCCGATTCACGATTTCAAGAGACAATTTCA  180
V  89.2% (223/250)  IGHV3-33*01  137  .....................A...........AT..........C....T.....A.............C..C..C..........C..  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  M  V  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  E  K  E  S  S  G  G  
                    Query_7057   181  AGAACATGGTGTACCTGCAAATGAATAGCCTGAGAGTCGAGGACACGGCCGTGTATTATTGCGCGAGAGAGAAGGAGAGTAGCGGGGGCT  270
V  89.2% (223/250)  IGHV3-33*01  227  ......C.C....T...........C..........C............T........C..T........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-15*01  18   ------------------------------------------------------------------------------.....-------  22

                                      ---------------->                                 
                                      F  N  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7057   271  TCAATGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  320
J  95.6% (43/45)    IGHJ6*02     18   -----...A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_313841

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           324     8e-91
IGHD6-19*01                                                                                           12.2    32   
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTAAAGACCCCGGAGGGC	GGCTGG	C	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTAAAGACCCCGGAGGGCGGCTGGCACTACTACTACGGCTTGGACGTC	ARVKTPEGGWHYYYGLDV	239	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	20	4	0	83.3
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	21	3	0	87.5
FR3-IMGT	125	238	114	110	4	0	96.5
CDR3-IMGT (germline)	239	243	5	5	0	0	100
Total	N/A	N/A	229	218	11	0	95.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  S  F  S  D  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  
                    Query_7058   15   GTGCAGCCTCTGGATTCAGCTTCAGTGACTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTA  104
V  95.2% (218/229)  IGHV3-21*01  65   ..................C.......AG.....G........................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_7058   105  GCAGTGGGAGTAGTTACATATACTACGCAGACTCAGTAAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGC  194
V  95.2% (218/229)  IGHV3-21*01  155  .T...A.T.............................G....................................................  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------------CDR3-IMGT--------------
                                      Q  I  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  K  T  P  E  G  G  W  H  Y  Y  Y  G  
                    Query_7058   195  AAATTAACAGCCTGAGAGCCGACGACACGGCTGTATATTACTGTGCGAGGGTAAAGACCCCGGAGGGCGGCTGGCACTACTACTACGGCT  284
V  95.2% (218/229)  IGHV3-21*01  245  ....G.................G...........G..............-----------------------------------------  293
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (6/6)     IGHD6-19*01  13   --------------------------------------------------------------------......----------------  18
J  96.4% (54/56)    IGHJ6*02     7    ---------------------------------------------------------------------------.............TA  21

                                      ------->                                 
                                      L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7058   285  TGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  325
J  96.4% (54/56)    IGHJ6*02     22   .........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_179969

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           286     1e-79
IGHD6-19*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGGGCAAG	ATAGTAGTGGCTGG	GGCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGAAGGGCAAGATAGTAGTGGCTGGGGCTACTACTTTGACACC	VREGQDSSGWGYYFDT	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	217	34	0	86.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  V  N  S  G  F  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_7059   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGGTCCGTCAATAGTGGTTTTTATTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  86.5% (217/251)  IGHV4-61*01  49   ...................C............C.......GC......AG...C..C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  D  W  I  G  N  V  Y  A  T  G  R  T  K  L  K  S  S  L  T  S  R  V  S  M  S  V  D  K  A 
                    Query_7059   91   CTGGACTGGATTGGCAATGTCTATGCCACTGGGAGAACCAAATTGAAGTCCTCCCTCACGAGTCGAGTCAGCATGTCCGTAGACAAGGCC  180
V  86.5% (217/251)  IGHV4-61*01  139  .....G........GT..A.....TA..G......C.....C.AC..CC.........A...........C...A..A.......C.T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  L  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  V  R  E  G  Q  D  S  S  G 
                    Query_7059   181  AAGAACCTGTTCTCCCTGAAACTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTTTTGTGTGCGAGAAGGGCAAGATAGTAGTGGC  270
V  86.5% (217/251)  IGHV4-61*01  229  .......A............G....G................................AC....C.A....-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD6-19*01  5    -------------------------------------------------------------------------------....C......  15

                                      GT------------------>                                  
                                       W  G  Y  Y  F  D  T  W  G  P  G  T  L  V  T  V  S  S  
                    Query_7059   271  TGGGGCTACTACTTTGACACCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  325
D  92.9% (13/14)    IGHD6-19*01  16   ...----------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*02     1    -------...........TA........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_179968

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            16.1    2.3  
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGGGAGGCGG	TTACGATT	CTATCCTCGGT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGGAGGCGGTTACGATTCTATCCTCGGTCTACGACTACGCTATGGACGTC	ASGEAVTILSSVYDYAMDV	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	232	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  F  Y  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_7060   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  95.9% (232/242)  IGHV4-59*01  49   ...........................................G..A................................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  Y  Y  S  G  R  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_7060   91   TGGATTGGGTCTATTTATTACAGTGGGAGGACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCGTATCAGTTGACACGTCCAAGAAC  180
V  95.9% (232/242)  IGHV4-59*01  139  ..........A...C..............C....................................A.......A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  G  E  A  V  T  I  L  S  S 
                    Query_7060   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGCGGGGAGGCGGTTACGATTCTATCCTCG  270
V  95.9% (232/242)  IGHV4-59*01  229  ...................G.................................C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (8/8)     IGHD3-3*01   4    -------------------------------------------------------------------------........---------  11

                                      ----------------------->                                 
                                       V  Y  D  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7060   271  GTCTACGACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  327
J  96.4% (53/55)    IGHJ6*02     8    --....T......G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_179966

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  G  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_7061   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGGGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTTCCACTTA  90
V  95.5% (278/291)  IGHV5-51*01  6    .........................................A....................................C...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  P
                    Query_7061   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   C.......G.................................................T.................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7061   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  .......C.....................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_7061   271  CATCTATTACTGTGCAAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  ...G...........G.....---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD1-26*01  4    -----------------------------...G....A.....-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------......TA....................................  49

                                                   
                                        T  V  S  S 
                    Query_7061   361  CACCGTCTCGTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_179965

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	74	0	0	100
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	286	7	0	97.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_7062   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCA  93
V  97.6% (286/293)  IGHV5-51*03  2    ..................................................................................C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_7062   94   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  183
V  97.6% (286/293)  IGHV5-51*03  92   G.........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_7062   184  GTCCGTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  97.6% (286/293)  IGHV5-51*03  182  .C..........................C....C....A..................A................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_7062   274  CCGCCATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  363
V  97.6% (286/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)   IGHD6-19*01  4    --------------------------------------...............-------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   --------------------------------------------------------..................................  45

                                         
                                      S  
                    Query_7062   364  CAG  366
J  100.0% (37/37)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_179964

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           322     2e-90
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_7063   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_7063   91   CTAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-61*08  139  ..G..................T..T................C.................G.......TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N 
                    Query_7063   181  AGGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAAC  270
V  91.2% (228/250)  IGHV4-61*08  229  .A.................A.....GC..........................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G..G.....G.  22

                                      3-IMGT----------------------->                                  
                                       C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7063   271  TGCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  86.4% (19/22)    IGHD2-15*01  23   ......----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_179963

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           374     9e-106
IGHD3-16*02                                                                                           27.6    9e-04 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGC	TTTGGGGGATTTATCGT	CATTAGTGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCTTTGGGGGATTTATCGTCATTAGTGGGCTTTGACTAC	ARALGDLSSLVGFDY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	67	4	0	94.4
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	104	10	0	91.2
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	289	264	25	0	91.3


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  N  F  S  N  
                    Query_7064   5    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAAATCTCCTGTAAGGTGTCGGGATACAACTTTAGTAATT  94
V  91.3% (264/289)  IGHV5-51*03  5    ....................................................G.............GT..T.......G.....CC.GC.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  A  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  S  
                    Query_7064   95   ACTGGATTGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGCTTGGATGGGGATCATCTTTCCTGATGACTCTGACACCAGATACAGTC  184
V  91.3% (264/289)  IGHV5-51*03  95   .......C..................................AG................A.....G.........T...........C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  P  V  T  M  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_7064   185  CGTCGTTCCAAGGCCCGGTCACCATGTCAGTCGACAAGTCCATTAGTACCGCCTACCTCCAGTGGAGCAGCCTGAAGGCCTCGGACACCG  274
V  91.3% (264/289)  IGHV5-51*03  185  ....C..........A.........C....C............C..C...........G...............................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------CDR3-IMGT----------------->                               
                                      A  I  Y  Y  C  A  R  A  L  G  D  L  S  S  L  V  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_7064   275  CCATATATTATTGTGCGAGGGCTTTGGGGGATTTATCGTCATTAGTGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  364
V  91.3% (264/289)  IGHV5-51*03  275  ....G.....C........-----------------------------------------------------------------------  293
                                      A  M  Y  Y  C  A                                                                          
D  94.1% (16/17)    IGHD3-16*02  15   ----------------------.........G.......---------------------------------------------------  31
J  100.0% (44/44)   IGHJ4*02     5    -------------------------------------------------.........................................  45

                                         
                                      S  
                    Query_7064   365  CAG  367
J  100.0% (44/44)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_179962

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           327     9e-92
IGHD2-15*01                                                                                           12.2    32   
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	CGACATTC	AGTGGT	CCCTATTCTTTAGTG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGCGACATTCAGTGGTCCCTATTCTTTAGTGGACTAC	TTATFSGPYSLVDY	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	102	12	0	89.5
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	232	23	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  Q  F  N  F  N  D  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7065   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTCAATTCAATTTCAACGACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.0% (232/255)  IGHV3-15*01  47   .......T............G........GG.....C.....GTA.............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  L  K  G  K  A  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  I  I  S  R  D  
                    Query_7065   91   AGTGGGTTGGCCGTCTTAAAGGCAAAGCTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCATCATCTCAAGAGATG  180
V  91.0% (232/255)  IGHV3-15*01  137  ..............A.....A.....A................................................C..............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  Q  N  V  L  Y  L  Q  M  K  S  L  K  T  E  D  T  A  I  Y  Y  C  T  T  A  T  F  S  G  
                    Query_7065   181  ATTCACAAAATGTGTTGTATCTGCAAATGAAGAGCCTAAAAACCGAGGACACAGCCATTTATTATTGCACCACAGCGACATTCAGTGGTC  270
V  91.0% (232/255)  IGHV3-15*01  227  .....A....CAC.C................C.....G..................G.G.....C..T.......---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (6/6)     IGHD2-15*01  11   -----------------------------------------------------------------------------------......-  16

                                      IMGT--------------->                                  
                                      P  Y  S  L  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7065   271  CCTATTCTTTAGTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (40/40)   IGHJ4*02     9    --------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_179961

Length=413
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD1-26*01                                                                                           18.0    0.71  
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCGAGACGTCCCCTTAC	AGTGGGAACTAC	AACAAAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCGAGACGTCCCCTTACAGTGGGAACTACAACAAAGTACTACCACTACGGTATAGACGTC	ARHPRRPLTVGTTTKYYHYGIDV	289	357	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	70	4	0	94.6
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	277	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  
                    Query_7066   2    AGATGCAGCTGGTGCAGTCTGGGGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCCGGATACAGCTTTATTA  91
V  93.9% (277/295)  IGHV5-51*01  2    ..G...................A.................C................................T.............CC.  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_7066   92   GTTATTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCCGGTGACTCGGATACCAGATACA  181
V  93.9% (277/295)  IGHV5-51*01  92   .C..C........C.....................................................T........T.............  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  E  G  Q  V  T  I  S  V  D  M  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_7066   182  ACCCGTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACATGTCCATCAGCACCGCCTACCTCCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  93.9% (277/295)  IGHV5-51*01  182  G..........C...................A.C.....A.....................G............................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------------CDR3-IMGT----------------------------->    
                                      S  A  M  Y  Y  C  A  R  H  P  R  R  P  L  T  V  G  T  T  T  K  Y  Y  H  Y  G  I  D  V  W  
                    Query_7066   272  GCGCCATGTATTACTGTGCGAGACATCCGAGACGTCCCCTTACAGTGGGAACTACAACAAAGTACTACCACTACGGTATAGACGTCTGGG  361
V  93.9% (277/295)  IGHV5-51*01  272  C........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  91.7% (11/12)    IGHD1-26*01  6    -------------------------------------------.......G....-----------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------------------------......T..........G..........  33

                                                                   
                                      G  L  G  T  T  V  T  V  S  S 
                    Query_7066   362  GCCTAGGGACCACGGTCACCGTCTCCTCA  390
J  94.7% (54/57)    IGHJ6*02     34   ...A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40498920


Query= Query_179960

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHD3-22*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGAAA	TATGACTATGAT	CTTGGAGACGTGGGTCTCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGAAATATGACTATGATCTTGGAGACGTGGGTCTCCACAACTTTGACTCC	ARAPKYDYDLGDVGLHNFDS	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  N  Y  F  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_7067   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTAATTACTTCTGGAGCTGGATTCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  92.2% (225/244)  IGHV4-59*01  49   ......................................C....G.....A............C..................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  L  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  I  D  T  P  K  N 
                    Query_7067   91   TGGATTGGGTATATCTATTATAGTGGACTCACCAAGTACAACCCGTCCCTCAAGAGTCGAGTCAGCATATCAATTGACACGCCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*01  139  ....................C.....GAG......C........C...................C.......G.A......T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       H  F  S  L  K  V  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  A  P  K  Y  D  Y  D  L  G 
                    Query_7067   181  CACTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCATTTATTACTGTGCGAGAGCCCCGAAATATGACTATGATCTTGGA  270
V  92.2% (225/244)  IGHV4-59*01  229  ..G............C.............................G.G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-22*01  2    ------------------------------------------------------------------------...T........------  13

                                      GT------------------------>                                  
                                       D  V  G  L  H  N  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7067   271  GACGTGGGTCTCCACAACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  97.8% (44/45)    IGHJ4*02     4    ----------------.........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_236473

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           325     3e-91
IGHD3-16*01                                                                                           12.2    34   
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GCCGCGAAAATCGGTCTTTGGACTACTTATCCC	TGGGGG	GGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCCGCGAAAATCGGTCTTTGGACTACTTATCCCTGGGGGGGGCGACTGGTTCGACCCC	ARGPRKSVFGLLIPGGGDWFDP	240	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  D  Y  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_7068   4    CCCTGAGACTCTCCTGTGCTGTCTATGGTGGGTCCTTCGATTACTATTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  92.6% (226/244)  IGHV4-34*01  50   .....TCC...A....C.....................AG.GGT..C...........................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  G  A  T  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_7068   94   GGATTGGGGAAATCAATCACGGTGCAACGACCAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  92.6% (226/244)  IGHV4-34*01  140  ...................TA...G..GC............C................................................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------------CDR3-
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  K  S  V  F  G  L  
                    Query_7068   184  AGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGCCGCGAAAATCGGTCTTTGGACTAC  273
V  92.6% (226/244)  IGHV4-34*01  230  ...................C............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          

                                      IMGT--------------------------->                                  
                                      L  I  P  G  G  G  D  W  F  D  P  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_7068   274  TTATCCCTGGGGGGGGCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  339
D  100.0% (6/6)     IGHD3-16*01  17   -------......-----------------------------------------------------  22
J  97.9% (47/48)    IGHJ5*02     4    ------------------................................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_345626

Length=316
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           311     4e-87
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	N/A	TCCTTGCCCCCGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCCTTGCCCCCGAACTAC	ASLPPNY	237	257	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	19	5	0	79.2
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	20	4	0	83.3
FR3-IMGT	123	236	114	113	1	0	99.1
CDR3-IMGT (germline)	237	239	3	3	0	0	100
Total	N/A	N/A	227	213	14	0	93.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  S  F  T  T  H  T  M  K  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  S  I  
                    Query_7069   13   GTACAGCCTCTGGATTCAGCTTCACTACCCATACCATGAAGTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGGAGTGGGTCGCATCCATTA  102
V  93.8% (213/227)  IGHV3-21*01  65   ..G...............C.....G..G.T...G......C.................A.....................T.........  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      T  S  S  S  T  Y  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_7069   103  CTAGTAGTAGTACCTACACATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGC  192
V  93.8% (213/227)  IGHV3-21*01  155  G...........GT....T.......................................................................  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-----CDR3-IMGT----->                         
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  L  P  P  N  Y  W  G  Q  G  T  L  V  T  
                    Query_7069   193  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGTCCTTGCCCCCGAACTACTGGGGCCAGGGAACCCTGGTCACCG  282
V  93.8% (213/227)  IGHV3-21*01  245  ..................................G............-------------------------------------------  291
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
J  100.0% (39/39)   IGHJ4*02     10   ------------------------------------------------------------..............................  39

                                               
                                      V  S  S  
                    Query_7069   283  TCTCCTCAG  291
J  100.0% (39/39)   IGHJ4*02     40   .........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30515799


Query= Query_120459

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           420     7e-120
IGHD2-21*02                                                                                           18.0    0.65  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	CGACTG	GGTGGGGACTACTAT	GGTCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTC	VRRLGGDYYGPFEF	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  K  I  S  C  M  G  S  G  F  S  F  S  K  Y
                    Query_7070   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTATGGGTTCTGGATTCAGCTTTTCCAAGTA  90
V  96.5% (279/289)  IGHV5-51*03  6    ....................C.........................................A...........A.......A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_7070   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.5% (279/289)  IGHV5-51*03  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7070   181  GTCCTTCCAAGGCCAGGTCAGCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.5% (279/289)  IGHV5-51*03  186  ....................C.....................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  V  R  R  L  G  G  D  Y  Y  G  P  F  E  F  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_7070   271  CGTGTATTATTGTGTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  359
V  96.5% (279/289)  IGHV5-51*03  276  .A.......C....C....----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  86.7% (13/15)    IGHD2-21*02  11   -------------------------.....T....G....-------------------------------------------------  25
J  93.0% (40/43)    IGHJ4*02     6    ----------------------------------------------.....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_120458

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           371     7e-105
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	ARPSSASGWHFDN	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	18	6	0	75
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	18	6	0	75
FR3-IMGT	177	290	114	102	12	0	89.5
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	265	28	0	90.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  
                    Query_7071   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCA  93
V  90.4% (265/293)  IGHV5-51*03  2    .............................G.............G.........................G.........C.GC..T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  D  I  R  Y  
                    Query_7071   94   GTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGATATTAGATATA  183
V  90.4% (265/293)  IGHV5-51*03  92   .C..C.......G..................................................AT...GG...........CC.....C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_7071   184  GTCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGCTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  90.4% (265/293)  IGHV5-51*03  182  .C...............................C..A.AAG.......G.........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  G  L  Y  S  W  A  R  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7071   274  CCGGCTTGTATTCCTGGGCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  363
V  90.4% (265/293)  IGHV5-51*03  272  ...C.A......A...T......-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ----------------------------------..........----------------------------------------------  18
J  93.3% (42/45)    IGHJ4*02     4    ---------------------------------------------........T.C.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_345628

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_7072   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  92.2% (225/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  R  T  N  Y  N  P  S  L  K  P  R  V  T  I  S  L  N  T  S  K  N 
                    Query_7072   91   TGGCTTGGCTATATCCATTACAGGGGGCGCACCAACTACAACCCCTCCCTCAAGCCTCGAGTCACCATTTCATTAAACACGTCAAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  ...A....G......T.......T...A..........................AG............A...G..G.......C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G 
                    Query_7072   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGT  270
V  92.2% (225/244)  IGHV4-59*08  229  .............A......C..........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_7072   271  TATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  334
J  94.2% (49/52)    IGHJ1*01     1    ------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_120451

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            389     2e-110
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACATAC	TACTACGATAGTCGTGGTTAT	CGATCGTGGGTCCCCCG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACATACTACTACGATAGTCGTGGTTATCGATCGTGGGTCCCCCGCTTTGACTCC	ARTYYYDSRGYRSWVPRFDS	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  A  F  T  A  Y
                    Query_7073   1    GCAGCTGGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACGCCTTCACCGCCTA  90
V  93.1% (269/289)  IGHV1-8*02   6    ..................G.....G...................................................A........AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  F  M  N  P  N  S  G  N  T  G  S  A  Q
                    Query_7073   91   CTATATCCACTGGGTGCGACAGGCCCCTGGACAAGGCCTTGAGTGGATGGGATTTATGAACCCAAACAGTGGTAACACAGGCTCTGCACA  180
V  93.1% (269/289)  IGHV1-8*02   96   TG.....A.................A..........G................GG........T...................A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  M  T  R  N  T  S  I  N  T  A  Y  M  E  L  S  S  L  T  S  D  D  T  A
                    Query_7073   181  GAGGTTCCAGGGCAGAGTCACCATGACCAGAAATACCTCCATAAACACAGCCTACATGGAGCTGAGCAGCCTGACATCTGACGACACGGC  270
V  93.1% (269/289)  IGHV1-8*02   186  ..A...........................G..C..........G.............................G......G........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        V  Y  Y  C  A  R  T  Y  Y  Y  D  S  R  G  Y  R  S  W  V  P  R  F  D  S  W  G  Q  G  T  L
                    Query_7073   271  CGTGTATTACTGTGCGAGAACATACTACTACGATAGTCGTGGTTATCGATCGTGGGTCCCCCGCTTTGACTCCTGGGGCCAGGGAACCCT  360
V  93.1% (269/289)  IGHV1-8*02   276  ...................-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  90.5% (19/21)    IGHD3-22*01  5    -------------------------.....T......A........--------------------------------------------  25
J  97.7% (43/44)    IGHJ4*02     5    ---------------------------------------------------------------........A..................  31

                                                       
                                        V  T  V  S  S  
                    Query_7073   361  GGTCACCGTCTCCTCAG  377
J  97.7% (43/44)    IGHJ4*02     32   .................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_120453

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           347     7e-98
IGHD4-4*01                                                                                            14.1    8.3  
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD4-4*01	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCCCCC	CAGTAAC	CCCG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCCCCCAGTAACCCCGGATGCTTTGGATATC	ARPPPVTPDALDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  R  D  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7074   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTCAGGGACTATGGCATTCATTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-30*03  47   ......................................T....TAG.........G..C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  *  V  A  F  I  P  Y  D  G  S  N  Q  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7074   91   AGTAGGTGGCTTTTATACCATATGATGGAAGTAATCAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (235/248)  IGHV3-30*03  137  ...G......AG.....T.................A......................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  P  P  V  T  P  D  
                    Query_7074   181  AGAACACGCTGTATCTGCAAATGGACAGCCTGAGGGCTGAGGACACGGCTGTGTATTACTGTGCGAGACCCCCCCCAGTAACCCCGGATG  270
V  94.8% (235/248)  IGHV3-30*03  227  .......................A..........A.................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD4-4*01   7    ---------------------------------------------------------------------------.......--------  13
J  98.0% (48/49)    IGHJ3*02     2    --------------------------------------------------------------------------------------....  5

                                      ---------->                                  
                                      A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7074   271  CTTTGGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  315
J  98.0% (48/49)    IGHJ3*02     6    ....T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_120452

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           322     2e-90
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_7075   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_7075   91   CTAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-61*08  139  ..G..................T..T................C.................G.......TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N 
                    Query_7075   181  AGGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAAC  270
V  91.2% (228/250)  IGHV4-61*08  229  .A.................A.....GC..........................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G..G.....G.  22

                                      3-IMGT----------------------->                                  
                                       C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7075   271  TGCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  86.4% (19/22)    IGHD2-15*01  23   ......----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_120455

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD3-16*01                                                                                           10.3    117  
IGHJ6*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGG	GGTAAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGGTAATTACTACTACGCTTTGGACGTC	ARGGGNYYYALDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7076   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATAACTAATTATTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   ...............................G......C.G..G...C........C........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  F  Y  S  G  I  T  S  Y  T  P  S  L  Q  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_7076   91   TGGATTGGCTATATGTTTTACAGTGGGATCACCAGCTACACCCCCTCCCTCCAGAGTCGAGTCACCATGTCAGTCGACACGTCCAAGAAG  180
V  91.4% (223/244)  IGHV4-59*01  139  ........G.....C.A...........G.....A.....A..........A................A.....A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  I  S  L  E  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  N  Y  Y  Y  A  L 
                    Query_7076   181  CAGATCTCCCTGGAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGGGGGGGGTAATTACTACTACGCTTTG  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T........A......G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   ----------------------------------------------------------------.....---------------------  22
J  96.3% (52/54)    IGHJ6*02     9    ---------------------------------------------------------------------------..........G.A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7076   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  96.3% (52/54)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_120454

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           358     4e-101
IGHD2-15*01                                                                                           14.1    9.8   
IGHJ6*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGGGCTGCATC	TTGTAGCGGT	TCCAATTGCTACGGCTTAGG	CGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGCTGCATCTTGTAGCGGTTCCAATTGCTACGGCTTAGGCGGAATGGACGTC	ARRAASCSGSNCYGLGGMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	259	30	0	89.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  L  G  S  G  Y  S  F  V  K  Y
                    Query_7077   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCTGGGTTCTGGATACAGCTTTGTCAAATA  90
V  89.6% (259/289)  IGHV5-51*03  6    ..............................A..............................AA...................AC..GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  T  P  G  K  G  L  E  W  M  G  T  I  Y  P  S  D  S  D  T  R  Y  S  P
                    Query_7077   91   TTGGATTGCTTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGGACCATCTATCCGTCTGACTCTGATACCCGATACAGCCC  180
V  89.6% (259/289)  IGHV5-51*03  96   C.....C.GC.............T.............................T.........TGG.............A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  P  V  T  I  S  V  D  K  S  L  S  T  A  F  L  Q  W  S  S  L  G  V  S  D  S  A
                    Query_7077   181  GTCCTTCCAAGGCCCGGTCACCATCTCAGTCGACAAGTCTCTCTCCACCGCCTTCCTGCAGTGGAGCAGCCTGGGGGTTTCGGACAGCGC  270
V  89.6% (259/289)  IGHV5-51*03  186  ..............A..............C.........CA..AG........A...................AA..CC.......C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        I  Y  Y  C  A  R  R  A  A  S  C  S  G  S  N  C  Y  G  L  G  G  M  D  V  G  G  R  G  T  T
                    Query_7077   271  CATTTATTACTGTGCGAGACGGGCTGCATCTTGTAGCGGTTCCAATTGCTACGGCTTAGGCGGAATGGACGTCGGGGGCCGAGGGACCAC  360
V  89.6% (259/289)  IGHV5-51*03  276  ...G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  90.0% (9/10)     IGHD2-15*01  7    ------------------------------......T...--------------------------------------------------  16
J  91.3% (42/46)    IGHJ6*02     17   ------------------------------------------------------------...T.........T......A.........  46

                                                      
                                        V  I  V  S  S 
                    Query_7077   361  GGTCATCGTCTCCTCA  376
J  91.3% (42/46)    IGHJ6*02     47   .....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_120456

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD1-26*01                                                                                           10.3    116  
IGHJ2*01                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGAG	GTGGG	CTT	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGGTGGGCTTTGGTACTTCGATCTC	ARDRGGLWYFDL	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  D  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7078   1    ACCCTGTCCCTCACCTGCACTGTCTCTGATGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   ............................G..............G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  N  I  Y  H  S  G  S  T  M  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  P  K  N 
                    Query_7078   91   TGGATTGCGAATATCTATCACAGTGGCAGCACAATGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGCCCAAGAAT  180
V  95.1% (233/245)  IGHV4-59*01  139  .......G.T........T.......G.....C.AC.............................................T.......C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  G  G  L  W  Y  F  D 
                    Query_7078   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGAGGTGGGCTTTGGTACTTCGAT  270
V  95.1% (233/245)  IGHV4-59*01  229  ...................G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD1-26*01  7    ----------------------------------------------------------------------.....---------------  11
J  100.0% (49/49)   IGHJ2*01     5    ------------------------------------------------------------------------------............  16

                                      -->                                  
                                       L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_7078   271  CTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  307
J  100.0% (49/49)   IGHJ2*01     17   .....................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_23463

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD2-15*01                                                                                           16.1    2.3  
IGHJ5*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TCAGCAGGTTGGCTGCGTGACTCC	GCTACTCC	CCGTGTT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATCAGCAGGTTGGCTGCGTGACTCCGCTACTCCCCGTGTTAACTGGTTCGACCCC	AKSAGWLRDSATPRVNWFDP	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  A  G  F  A  F  G  T  Y  A  M  N  W  V  R  Q  A  P  G  T  G  L  
                    Query_7079   1    GGTCCCTGAGACTCTCCTGTGCAGCCGCTGGATTCGCCTTTGGCACCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGACGGGGCTGG  90
V  93.1% (231/248)  IGHV3-23*01  47   ..........................T........A.....A...G...........G.......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  D  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7079   91   AGTGGGTCTCAAGTATCAGTGGTAGTGGTGATGGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (231/248)  IGHV3-23*01  137  ...........GC...T.............G.A.........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  L  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  S  A  G  W  L  R  D  
                    Query_7079   181  AGAACACGCTACTCCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATTTATTACTGTGCGAAATCAGCAGGTTGGCTGCGTGACT  270
V  93.1% (231/248)  IGHV3-23*01  227  ..........GTAT....................................G.A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      R3-IMGT------------------------>                                  
                                      S  A  T  P  R  V  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7079   271  CCGCTACTCCCCGTGTTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  100.0% (8/8)     IGHD2-15*01  24   --........--------------------------------------------------------  31
J  100.0% (49/49)   IGHJ5*02     3    -----------------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_23462

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           397     8e-113
IGHD6-6*01                                                                                            21.8    0.046 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCGGGCGAGG	GTATGGCAGCTCGT	TCTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCGGGCGAGGGTATGGCAGCTCGTTCTGCTTTGACTCC	ATGRGYGSSFCFDS	290	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	73	2	0	97.3
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	106	8	0	93
CDR3-IMGT (germline)	290	293	4	4	0	0	100
Total	N/A	N/A	292	273	19	0	93.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N 
                    Query_7080   2    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGGGGCACCTTCAAC  91
V  93.5% (273/292)  IGHV1-69*06  1    .......................G...............................................T.....A..........G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  H  A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  M  F  A  T  A  S  Y 
                    Query_7080   92   AATCATGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGCCTTGAGTGGATGGGAGGGATCATCCCTATGTTTGCTACAGCAAGTTAC  181
V  93.5% (273/292)  IGHV1-69*06  91   .GCT.........G...........................G.............................C....G........AC...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  F  Q  G  R  V  T  I  T  A  D  K  S  T  R  T  V  Y  M  D  L  S  S  L  R  S  G  D 
                    Query_7080   182  GCACAGAACTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGCGCACAGTCTACATGGACCTGAGCAGCCTGAGATCTGGGGAC  271
V  93.5% (273/292)  IGHV1-69*06  181  ........G.......................................A......C.........G...................A....  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  T  G  R  G  Y  G  S  S  F  C  F  D  S  W  G  Q  G  T  L  L  T  V  S 
                    Query_7080   272  ACGGCCGTCTATTACTGTGCGACCGGGCGAGGGTATGGCAGCTCGTTCTGCTTTGACTCCTGGGGCCAGGGAACCCTGCTCACCGTCTCC  361
V  93.5% (273/292)  IGHV1-69*06  271  ........G.............--------------------------------------------------------------------  292
                                       T  A  V  Y  Y  C  A                                                                      
D  92.9% (13/14)    IGHD6-6*01   3    --------------------------------....A.........--------------------------------------------  16
J  95.5% (42/44)    IGHJ4*02     5    --------------------------------------------------........A...................G...........  44

                                          
                                       S  
                    Query_7080   362  TCAG  365
J  95.5% (42/44)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_213891

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           349     3e-98
IGHD3-3*01                                                                                            35.3    4e-06
IGHJ6*02                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTTAATCTCCCCTC	GTATTACGATTTTTGGAG	CGGAGGCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTTAATCTCCCCTCGTATTACGATTTTTGGAGCGGAGGCAACTACTACTACGGTTTGGACGTC	ARLNLPSYYDFWSGGNYYYGLDV	258	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	20	4	0	83.3
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	143	21	18	0	3	85.7
FR3-IMGT	144	257	114	105	9	0	92.1
CDR3-IMGT (germline)	258	262	5	5	0	0	100
Total	N/A	N/A	265	246	16	3	92.8


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  A  S  I  A  S  Y  Y  W  S  W  I  R  
                    Query_7081   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCGCAAGTTACTACTGGAGCTGGATCCGGC  90
V  92.8% (246/265)  IGHV4-59*08  26   ................T.....................................G.......AGT.........................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S     N  Y  N  P  S  L  K  S  R  L  T  
                    Query_7081   91   AGCCCCCTGGAAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAG---CAACTACAACCCCTCCCTCAAGAGTCGACTCACCA  177
V  92.8% (246/265)  IGHV4-59*08  116  .......A..G.........................................CAC............................G......  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      M  S  L  D  T  S  K  N  Q  F  S  L  N  L  T  F  V  T  A  A  D  S  A  M  Y  Y  W  A  R  L  
                    Query_7081   178  TGTCACTAGACACGTCCAAGAACCAGTTCTCCCTGAACCTGACCTTTGTGACCGCCGCAGACTCGGCCATGTATTACTGGGCGAGGCTTA  267
V  92.8% (246/265)  IGHV4-59*08  206  .A...G...............................G....G..C................A.....G..........T.....-----  290
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A        

                                      --------------------CDR3-IMGT----------------------------->                               
                                      N  L  P  S  Y  Y  D  F  W  S  G  G  N  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  
                    Query_7081   268  ATCTCCCCTCGTATTACGATTTTTGGAGCGGAGGCAACTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCT  357
D  100.0% (18/18)   IGHD3-3*01   1    ----------..................--------------------------------------------------------------  18
J  98.2% (55/56)    IGHJ6*02     7    ------------------------------------..............A.......................................  60

                                        
                                      S 
                    Query_7081   358  CA  359
J  98.2% (55/56)    IGHJ6*02     61   ..  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_23467

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           329     3e-92
IGHD3-3*01                                                                                            10.3    123  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCTC	TTTTT	CTCCAAGAAAGAGGCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTTTTTCTCCAAGAAAGAGGCTACTACTTTGCCTAC	ARSSLFLQERGYYFAY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  K  S  G  G  Y  Y  W  S  W  H  R  P  H  P  G  K  G 
                    Query_7082   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAAGAGTGGTGGCTACTACTGGAGCTGGCACCGCCCGCACCCAGGGAAGGGC  90
V  92.3% (229/248)  IGHV4-31*03  49   ..................................C.....GC........T...............AT.....A................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  V  G  N  I  Y  Y  S  R  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  A  T  S 
                    Query_7082   91   CTGGAGTGGGTTGGGAACATCTATTACAGTAGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGCCACGTCT  180
V  92.3% (229/248)  IGHV4-31*03  139  .........A.....T..............G...G....................................C........A.A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  T  Q  F  S  L  K  P  S  S  V  T  A  A  D  T  A  V  Y  S  *  A  R  S  S  L  F  L  Q  E 
                    Query_7082   181  AAGACCCAGTTCTCCCTGAAGCCTAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGAGCGAGGTCTTCTCTTTTTCTCCAAGAA  270
V  92.3% (229/248)  IGHV4-31*03  229  ....A.................TG..................................A...T.....----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD3-3*01   10   ----------------------------------------------------------------------------.....---------  14

                                      GT------------------>                              
                                       R  G  Y  Y  F  A  Y  W  G  Q  A  T  L  V  P  V  S 
                    Query_7082   271  AGAGGCTACTACTTTGCCTACTGGGGCCAGGCAACCCTGGTCCCCGTCTCC  321
J  93.2% (41/44)    IGHJ4*02     1    -------.........A..............G..........A........  44


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_23466

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           43.0    2e-08
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCTAGTCTGGAA	TATGATTACGTTTGGGGGAGTT	CTCACCTCAC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCTAGTCTGGAATATGATTACGTTTGGGGGAGTTCTCACCTCACCTGGTTCGACCCC	AREASLEYDYVWGSSHLTWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  D  S  I  S  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7083   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGACTCCATCAGTAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...................C...........G.............T............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  T  G  S  T  K  Y  N  P  S  L  R  S  R  V  T  I  S  V  G  T  S  K  N 
                    Query_7083   91   TGGATTGGGTATATGTATTACACTGGGAGCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGGCACGTCCAAGAAT  180
V  95.5% (234/245)  IGHV4-59*01  139  ..............C.......G............C................A.......................A............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  E  A  S  L  E  Y  D  Y  V 
                    Query_7083   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGAGCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAAGCTAGTCTGGAATATGATTACGTT  270
V  95.5% (234/245)  IGHV4-59*01  229  ...............C............C....................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (22/22)   IGHD3-16*01  5    ------------------------------------------------------------------------------............  16

                                      -IMGT--------------------------->                                  
                                       W  G  S  S  H  L  T  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7083   271  TGGGGGAGTTCTCACCTCACCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  337
D  100.0% (22/22)   IGHD3-16*01  17   ..........---------------------------------------------------------  26
J  100.0% (47/47)   IGHJ5*02     5    --------------------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_23465

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7084   1    GGTCTCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-21*01  47   ....C.......................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  P  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_7084   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACCCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  92.0% (230/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A...T...................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  D  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_7084   181  AGAAGTCAGTGTTTCTGCAAATGGACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  92.0% (230/250)  IGHV3-21*01  227  ....C...C...A..........A................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7084   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_23464

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           311     4e-87
IGHD4-4*01                                                                                            19.9    0.15 
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATCAGC	CAGTAACTAC	TCTCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCAGCCAGTAACTACTCTCGGCTAC	ARNQPVTTLGY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  T  V  S  N  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_7085   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGGTCACCGTCAGTAACAACTATATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.6% (222/245)  IGHV3-53*01  47   ................................T............G......C....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  L  S  V  M  Y  S  R  G  A  T  R  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  S  S  K  
                    Query_7085   91   AGTGGCTCTCAGTCATGTATAGTCGTGGAGCCACAAGGTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  90.6% (222/245)  IGHV3-53*01  137  .....G.......T..T.....CG....TAG....TAC................A..........................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      N  T  V  Y  L  Q  M  K  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  N  Q  P  V  T  T  L  G  
                    Query_7085   181  ACACGGTGTATCTTCAAATGAAAAACCTGAGAGTCGAGGACACGGCCGTCTATTACTGTGCGAGAAATCAGCCAGTAACTACTCTCGGCT  270
V  90.6% (222/245)  IGHV3-53*01  227  .....C................C.G........C...............G...............-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (10/10)   IGHD4-4*01   7    ------------------------------------------------------------------------..........--------  16
J  94.6% (35/37)    IGHJ4*02     11   ----------------------------------------------------------------------------------------..  12

                                      ->                                 
                                      Y  W  G  P  G  T  L  V  T  V  S  S 
                    Query_7085   271  ACTGGGGCCCGGGAACCCTTGTCACCGTCTCCTCA  305
J  94.6% (35/37)    IGHJ4*02     13   .........A.........G...............  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_236479

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	74	0	0	100
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	280	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  
                    Query_7086   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCA  91
V  95.6% (280/293)  IGHV5-51*03  2    .................................................................................G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  T  Y  P  G  G  S  N  T  R  Y  
                    Query_7086   92   GCTACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCACCTATCCTGGTGGCTCTAATACCCGATACA  181
V  95.6% (280/293)  IGHV5-51*03  92   ............G.......................A.......................T...........A....G.....A......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  
                    Query_7086   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACA  271
V  95.6% (280/293)  IGHV5-51*03  182  .................................................C...........G...............A.....T......  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_7086   272  CCGCCGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  361
V  95.6% (280/293)  IGHV5-51*03  272  .....A.G...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD6-19*01  5    --------------------------............----------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_7086   362  CCTCAG  367
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_23469

Length=309
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           279     3e-77
IGHD5-18*01                                                                                           14.1    7.5  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	227	253	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	17	7	0	70.8
FR2-IMGT	41	91	51	45	6	0	88.2
CDR2-IMGT	92	112	21	18	3	0	85.7
FR3-IMGT	113	226	114	109	5	0	95.6
CDR3-IMGT (germline)	227	233	7	7	0	0	100
Total	N/A	N/A	220	199	21	0	90.5


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-----CDR2-I
                                       S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E  W  L  G  Y  V  Y  D  S 
                    Query_7087   14   TCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAGTGGCTTGGATATGTCTATGACAGT  103
V  90.5% (199/220)  IGHV4-59*01  73   .....T..........GTAG..A..A......C............C.....GG................A....G...A.....T.....  162
                                       S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S 

                                      MGT-----><----------------------------------------------------FR3-IMGT--------------------
                                       G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N  Q  L  S  L  K  L  T  S 
                    Query_7087   104  GGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAACCAGCTCTCCCTGAAGCTGACCTCT  193
V  90.5% (199/220)  IGHV4-59*01  163  .....C.....C.....................................T...................T...............G....  252
                                       G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S 

                                      --------------------------------><--------CDR3-IMGT-------->                              
                                       V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G  Q  G  T  L  V  T  V  S 
                    Query_7087   194  GTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  283
V  90.5% (199/220)  IGHV4-59*01  253  ............................A...........--------------------------------------------------  292
                                       V  T  A  A  D  T  A  V  Y  Y  C  A  R                                                    
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------.......-------------------------------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------.....T................................  44

                                          
                                       S  
                    Query_7087   284  TCAG  287
J  97.6% (41/42)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 29776662


Query= Query_23468

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            333     1e-93
IGHD3-3*02                                                                                            12.2    31   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTT	GCATTT	CGATCTCCCACGAGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGCATTTCGATCTCCCACGAGGCATGGACGTC	ARLHFDLPRGMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  T  Y  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_7088  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGGGGCTCCATCACCAGTACTTACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  93.5% (229/245)  IGHV4-4*01  49   ..................G....C.....T..........G.....G.A.........G...........................G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  S  G  S  P  H  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_7088  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCCCCCACTACAGTCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  93.5% (229/245)  IGHV4-4*01  139  .................................A..A......AC.............................................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                      N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  W  C  A  R  L  H  F  D  L  P  R  G 
                    Query_7088  181  AACCAGTTCTCCCTGAAGTTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTGGTGTGCGAGGTTGCATTTCGATCTCCCACGAGGC  270
V  93.5% (229/245)  IGHV4-4*01  229  ..................C....C.............................T..C........-------------------------  293
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  100.0% (6/6)     IGHD3-3*02  7    --------------------------------------------------------------------......----------------  12

                                     -------->                                 
                                      M  D  V  W  G  Q  G  T  T  A  I  V  S  S 
                    Query_7088  271  ATGGACGTCTGGGGCCAAGGGACCACGGCCATCGTCTCCTCA  312
J  95.2% (40/42)    IGHJ6*02    21   ............................T..C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_226589

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            364     5e-103
IGHD5-18*01                                                                                           16.1    2.5   
IGHJ5*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCATGTTGGCCCGAA	GATACAGC	C	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCATGTTGGCCCGAAGATACAGCCTCGACCAC	ARGMLARRYSLDH	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	261	28	0	90.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  T  F  T  D  H 
                    Query_7089   2    CAGCTGGTGCAGTCTGGGGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCCAGGCTTCTGGATACACCTTCACTGACCAT  91
V  90.3% (261/289)  IGHV1-3*01   7    .....T......................A...............................A.......................AG.T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       P  V  H  W  V  R  Q  A  P  G  Q  R  P  E  W  M  G  W  I  N  P  D  N  D  R  T  K  Y  S  E 
                    Query_7089   92   CCTGTACATTGGGTGCGCCAGGCCCCCGGACAAAGGCCTGAGTGGATGGGATGGATCAACCCTGACAATGACAGAACAAAGTATTCAGAG  181
V  90.3% (261/289)  IGHV1-3*01   97   G..A.G...............................T......................G...G.....GT.AC.....A......C..  186
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  V  Q  G  R  V  A  L  T  I  D  T  S  A  S  R  A  Y  M  E  L  T  S  L  T  S  E  D  T  A 
                    Query_7089   182  AAGGTCCAGGGCAGAGTCGCCCTTACCATTGACACATCCGCGAGCAGAGCCTACATGGAGCTGACGAGCCTGACATCTGAAGACACGGCT  271
V  90.3% (261/289)  IGHV1-3*01   187  ...T..............A..A......GG................C.................GC.......G................  276
                                       K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><--------------CDR3-IMGT-------------->                                  
                                       V  Y  Y  C  A  R  G  M  L  A  R  R  Y  S  L  D  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_7089   272  GTCTATTACTGTGCGAGAGGCATGTTGGCCCGAAGATACAGCCTCGACCACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  356
V  90.3% (261/289)  IGHV1-3*01   277  ..G................------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD5-18*01  4    ----------------------------------........-------------------------------------------  11
J  95.2% (40/42)    IGHJ5*02     10   -------------------------------------------......C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_296313

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     1e-87
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CAAGGG	GGCTACGA	CTGGGGACC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACAAGGGGGCTACGACTGGGGACCCTTTGACCAG	AKQGGYDWGPFDQ	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	224	24	0	90.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  L  F  D  N  S  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7090   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCCTCTTTGACAACTCTGCCATGAACTGGGTCCGCCAGGCTCCTGGGAAGGGGCTGG  90
V  90.3% (224/248)  IGHV3-23*01  47   ...............................A...AC....AG..G..A........G..................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  L  S  G  S  G  E  T  T  H  F  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_7090   91   AGTGGGTCTCAGGTCTTAGTGGTAGTGGTGAAACCACACACTTCGCAGACTCCGTGAAGGGCCGGTTCAGTATCTCCAGGGACAATTCCA  180
V  90.3% (224/248)  IGHV3-23*01  137  ............C.A...............GT.G....T...A..........................CC........A..........  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  V  Y  L  Q  M  N  N  L  R  A  G  D  T  A  V  Y  Y  C  A  K  Q  G  G  Y  D  W  G  
                    Query_7090   181  AGAACACAGTGTATCTGCAAATGAACAACCTAAGAGCCGGGGACACGGCCGTATATTACTGTGCGAAACAAGGGGGCTACGACTGGGGAC  270
V  90.3% (224/248)  IGHV3-23*01  227  .......GC..................G...G.......A............................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD5-12*01  12   --------------------------------------------------------------------------........--------  19

                                      ---------->                                  
                                      P  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7090   271  CCTTTGACCAGTGGGGCCAGGGTACCCTGGTCACCGTCTCCTCAG  315
J  93.2% (41/44)    IGHJ4*02     5    -.......T.C...........A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_26525

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            315     5e-88
IGHD2-15*01                                                                                           33.4    1e-05
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GATATTGTAATGCTGGTAACTGCTAC	GAGGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATATTGTAATGCTGGTAACTGCTACGAGGGTGCTTTTGATATC	ARGYCNAGNCYEGAFDI	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	224	23	0	90.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  V  S  I  S  G  S  Y  W  Y  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_7091   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGTCTCCATCAGCGGTAGTTATTGGTATAGTTGGGTCCGCCAGACCCCAGGGAAGGGACTG  90
V  90.7% (224/247)  IGHV4-4*01   49   ...............................G..........A.....A.C....GG...............C.............G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  D  H  S  G  S  T  S  Y  N  P  S  V  K  S  R  L  T  I  S  E  D  K  S  K 
                    Query_7091   91   GAGTGGATTGGGGAAATCGATCACAGTGGGAGCACCAGCTACAATCCGTCCGTCAAGAGTCGACTCACCATATCAGAAGACAAGTCAAAG  180
V  90.7% (224/247)  IGHV4-4*01   139  ..................T....T.............A......C......C...........G............T.........C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  K  I  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  C  N  A  G  N  C 
                    Query_7091   181  AATAAAATCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGATATTGTAATGCTGGTAACTGC  270
V  90.7% (224/247)  IGHV4-4*01   229  ..CC.GT..........G....G................................G...........-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  88.5% (23/26)    IGHD2-15*01  3    -------------------------------------------------------------------.........G..G.....G....  25

                                      -------------------->                                  
                                       Y  E  G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7091   271  TACGAGGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  325
D  88.5% (23/26)    IGHD2-15*01  26   ...----------------------------------------------------  28
J  100.0% (47/47)   IGHJ3*02     4    --------...............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_26527

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           315     5e-88
IGHD6-13*01                                                                                           18.0    0.62 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTGGT	CAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTGGTCAGCAGCTGACTGACTAC	ARDSGQQLTDY	276	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	275	147	111	3	33	75.5
CDR3-IMGT (germline)	276	283	8	8	0	0	100
Total	N/A	N/A	283	244	6	33	86.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_7092   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  86.2% (244/283)  IGHV3-21*01  47   ..............................................C..................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  H  I  Y  Y  G  D  S  V  K  G  R  F  T  Y  Y  A  D  S  V  
                    Query_7092   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAGTCACATATATTATGGAGACTCAGTGAAGGGCCGATTCACCTATTACGCAGACTCAGTGA  180
V  86.2% (244/283)  IGHV3-21*01  137  ................................T.....---------------------------------..C................  193
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I                                   Y  Y  A  D  S  V  

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                      K  G  R  F  T  I  S  R  D  D  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  
                    Query_7092   181  AGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATT  270
V  86.2% (244/283)  IGHV3-21*01  194  ..........................A..........................................................G....  283
                                      K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-----------CDR3-IMGT----------->                                  
                                      Y  C  A  R  D  S  G  Q  Q  L  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7092   271  ACTGTGCGAGAGATTCTGGTCAGCAGCTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
V  86.2% (244/283)  IGHV3-21*01  284  .............-----------------------------------------------------------  296
                                      Y  C  A  R                                                              
D  100.0% (9/9)     IGHD6-13*01  9    --------------------.........-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_26526

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         339     2e-95
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	N/A	N/A	TCACCTGCCAACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGATCACCTGCCAACCCCTACTACCACGCTCTGGACGTC	ARSPANPYYHALDV	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  V  Y  I  S  N  G  G  Y  S  W  T  W  I  R  Q  P  P  G  R  G 
                    Query_7093     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTACATCAGCAATGGTGGTTACTCCTGGACCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  93.6% (233/249)  IGHV4-30-2*01  49   ..................G............G..C........G.................G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Q  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  R  S 
                    Query_7093     91   CTGGAGTGGATTGGGTACATCTATCAAAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGCGTCACCATATCGGTAGACAGGTCC  180
V  93.6% (233/249)  IGHV4-30-2*01  139  ..........................T...............................A......A...........A............  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  V  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  A  N  P  Y  Y 
                    Query_7093     181  AAGAACCAGTTCTCCGTTAACTTGAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGATCACCTGCCAACCCCTACTAC  270
V  93.6% (233/249)  IGHV4-30-2*01  229  ...............C.G..GC....C..........................G...............---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  92.7% (51/55)    IGHJ6*02       8    -----------------------------------------------------------------------------------.......  14

                                        -------------->                                 
                                         H  A  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7093     271  CACGCTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  318
J  92.7% (51/55)    IGHJ6*02       15   T...G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_26521

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD3-10*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGGAT	GGGAGTTA	CGAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATGGGAGTTACGAAACTTTGACTAC	ARGGWELRNFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_7094   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACAGCTTCACCAACTA  90
V  96.2% (278/289)  IGHV5-51*03  6    ....................C.............................................T..............T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  T  Y  S  P
                    Query_7094   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCACATACAGCCC  180
V  96.2% (278/289)  IGHV5-51*03  96   ............................................................................A...G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  M  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7094   181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACATGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (278/289)  IGHV5-51*03  186  ........A..........................A........G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  F  C  A  R  G  G  W  E  L  R  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7094   271  CATCTATTTCTGTGCGAGAGGGGGATGGGAGTTACGAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.2% (278/289)  IGHV5-51*03  276  ...G....A..........----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD3-10*01  17   --------------------------........-------------------------------------------------  24
J  100.0% (45/45)   IGHJ4*02     4    --------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_26520

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           300     8e-84
IGHD5-18*01                                                                                           18.0    0.60 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	218	26	0	89.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_7095   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  89.3% (218/244)  IGHV4-59*01  50   .....TCC...A....C.............G........G.AGT.A......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S  
                    Query_7095   94   GGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGCC  183
V  89.3% (218/244)  IGHV4-59*01  140  .......G......T..........G.GC.............................A.T.A....A...................A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F  
                    Query_7095   184  AGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTTG  273
V  89.3% (218/244)  IGHV4-59*01  230  .............G.....C..................A.......G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------------------------.......C.G..A..  15

                                      ------------------->                                  
                                      G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7095   274  GTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  83.3% (15/18)    IGHD5-18*01  16   ...---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    -----.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_26523

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           385     4e-109
IGHD3-16*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCGGGCGGTTA	ATTATGAT	AGGACTAATTTTATTTGGTAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CGGGCGGTTAATTATGATAGGACTAATTTTATTTGGTATTTTGACTTC	RAVNYDRTNFIWYFDF	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	282	113	109	4	0	96.5
Total	N/A	N/A	282	264	18	0	93.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  T  S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y
                    Query_7096   1    GCAGCTGGTGCAGTCTGGAGGAGGCGTGGTCCAGCCCGGGACGTCCCTGAGACTCTCCTGTGCAGCGTCAGGATTCATCTTCAGTAATTA  90
V  93.6% (264/282)  IGHV3-33*01  6    ..........G.......G.................T....G...........................T.......C........GC..  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  Y  Y  D  G  S  K  K  Y  Y  A  D
                    Query_7096   91   TGGCATGCACTGGGTCCGCCAGGCTCCGGGCAAGGGGCTGGAGTGGGTGGCAGTAATATACTATGATGGAAGTAAAAAGTATTATGCAGA  180
V  93.6% (264/282)  IGHV3-33*01  96   ...........................A..........................T....GG..............T..A..C........  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  N  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A
                    Query_7096   181  CTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACAACCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGC  270
V  93.6% (264/282)  IGHV3-33*01  186  ...............................................CG.........................................  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  R  A  V  N  Y  D  R  T  N  F  I  W  Y  F  D  F  W  G  Q  G  T  Q  V  T  V  S
                    Query_7096   271  TGTATATTACTGCCGGGCGGTTAATTATGATAGGACTAATTTTATTTGGTATTTTGACTTCTGGGGCCAGGGAACCCAGGTCACCGTGTC  360
V  93.6% (264/282)  IGHV3-33*01  276  ...G........------------------------------------------------------------------------------  287
                                        V  Y  Y                                                                                 
D  100.0% (8/8)     IGHD3-16*01  3    -----------------------........-----------------------------------------------------------  10
J  93.0% (40/43)    IGHJ4*02     6    ----------------------------------------------------.......A.................T.........C..  43

                                           
                                        S  
                    Query_7096   361  CTCAG  365
J  93.0% (40/43)    IGHJ4*02     44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_46911

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           291     5e-81
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	N/A	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GCCGGCGGGCAGG	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCAGGCAATTGGTTCGACCCC	ARGRRAGNWFDP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	42	9	0	82.4
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  A  G  A  Y  Y  W  S  W  I  R  Q  Y  P  G  G  V 
                    Query_7097   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGCTGGGGCTTACTACTGGAGTTGGATCCGCCAATACCCCGGGGGGGTC  90
V  87.2% (218/250)  IGHV4-31*01  49   .........................................CAG...T.G............C...........GC....A...AA..G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  Q  W  I  G  Y  I  Y  Y  G  E  R  T  Q  Y  N  P  S  L  K  N  L  L  T  I  S  G  D  T  S 
                    Query_7097   91   CTGCAGTGGATTGGATACATCTACTACGGTGAGAGAACCCAATACAATCCGTCCCTCAAGAATCTGCTGACCATATCAGGAGACACGTCT  180
V  87.2% (218/250)  IGHV4-31*01  139  ...G..........G........T...A...G...C...T.C.....C.............G...AG.T..........T..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       T  N  Q  F  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  W 
                    Query_7097   181  ACAAACCAGTTCTCCCTGAGCCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCAGGCAATTGG  270
V  87.2% (218/250)  IGHV4-31*01  229  .AG................AG.....C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  94.0% (47/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------...C...  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  I  L  V  T  V  T  S  
                    Query_7097   271  TTCGACCCCTGGGGCCAGGGAATCCTGGTCACCGTCACCTCAG  313
J  94.0% (47/50)    IGHJ5*02     9    ......................C.............T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_26529

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           336     1e-94
IGHD3-10*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAATGGGGAGTT	TTACTTTGGTTCGGG	AAAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAATGGGGAGTTTTACTTTGGTTCGGGAAATTTTGACTAC	ARANGEFYFGSGNFDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  S  E  S  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  
                    Query_7098   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCGTCAGTAGTGAAAGTTACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGAC  93
V  93.2% (232/249)  IGHV4-61*01  50   .....TCC...A....C.......................C....GT..................A........................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  F  Y  S  G  R  S  N  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S  
                    Query_7098   94   TGGAGTGGATTGGGTATATCTTTTACAGTGGGAGATCCAACTACAACCCCTCCCTCAACAGCCGTGTCACCATATCAGTAGACACGTCCA  183
V  93.2% (232/249)  IGHV4-61*01  140  .....................A............CA......................G..T..A.........................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  N  G  E  F  Y  F  
                    Query_7098   184  AGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCTGACACGGCCGTGTATTACTGTGCGAGAGCTAATGGGGAGTTTTACTTTG  273
V  93.2% (232/249)  IGHV4-61*01  230  ....................C...................G............................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD3-10*01  4    ----------------------------------------------------------------------------------.....A..  11

                                      T------------------>                                  
                                      G  S  G  N  F  D  Y  W  G  Q  R  T  L  V  T  V  S  S  
                    Query_7098   274  GTTCGGGAAATTTTGACTACTGGGGCCAGAGAACCCTGGTCACCGTCTCCTCAG  327
D  93.3% (14/15)    IGHD3-10*01  12   .......-----------------------------------------------  18
J  97.7% (42/43)    IGHJ4*02     6    -----------..................G........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_156388

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7099   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_7099   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_7099   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  93.1% (54/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  D  I  V  S  S 
                    Query_7099   271  GTCTGGGGCCAAGGGACCACGGACATCGTCTCCTCA  306
J  93.1% (54/58)    IGHJ6*02     27   ......................T..C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_156389

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           416     2e-118
IGHD2-2*01                                                                                            10.3    134   
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCAAGGC	ACCAG	TTCCCTCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCAAGGCACCAGTTCCCTCTTACTTTGACTAC	ARDPKAPVPSYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  F  T  Y 
                    Query_7100   2    CAGCTGGTGCAGTCTGGAGCCGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCCGGTTACACCTTTTTCACCTAC  91
V  95.9% (278/290)  IGHV1-18*04  7    ....................T...............................................T............AC..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  S  N  Y  A  Q 
                    Query_7100   92   GGCATCCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACTCAAACTATGCACAG  181
V  95.9% (278/290)  IGHV1-18*04  97   ..T...AG...................................................................A..............  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  Y  D  D  T  A 
                    Query_7100   182  AAACTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTCAGATATGACGACACGGCC  271
V  95.9% (278/290)  IGHV1-18*04  187  ..G....................................................................G....C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  D  P  K  A  P  V  P  S  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7100   272  GTGTATTACTGTGCGAGAGATCCCAAGGCACCAGTTCCCTCTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  95.9% (278/290)  IGHV1-18*04  277  ....................--------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (5/5)     IGHD2-2*01   17   -----------------------------.....------------------------------------------------------  21
J  100.0% (46/46)   IGHJ4*02     3    ------------------------------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_119691

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            360     1e-101
IGHD2-15*01                                                                                           18.0    0.64  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCACCTT	TATTGTAGT	TATGCCAGTATCGGCTGCTTGACCGGATGTTGCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGACCACCTTTATTGTAGTTATGCCAGTATCGGCTGCTTGACCGGATGTTGCCACTACTACGGTATGGACGTC	VRDHLYCSYASIGCLTGCCHYYGMDV	241	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	248	8	7	1	0	87.5
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  S  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_7101   1    ACCCTGTCCCTCACCTGCGCTGTCTCTAGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  96.4% (239/248)  IGHV4-4*02   49   ...........................G..............................................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 
                    Query_7101   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAG  180
V  96.4% (239/248)  IGHV4-4*02   139  ....................................A..................................A..........A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------------
                                       N  Q  F  S  L  N  L  R  S  M  T  A  A  D  T  A  V  Y  Y  C  V  R  D  H  L  Y  C  S  Y  A 
                    Query_7101   181  AACCAGTTCTCCCTGAACCTGAGGTCTATGACCGCCGCAGACACGGCCGTGTATTACTGTGTGAGAGACCACCTTTATTGTAGTTATGCC  270
V  96.4% (239/248)  IGHV4-4*02   229  .................G.....C...G..........G......................C......----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD2-15*01  5    ---------------------------------------------------------------------------.........------  13

                                      -----CDR3-IMGT--------------------------------->                                 
                                       S  I  G  C  L  T  G  C  C  H  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7101   271  AGTATCGGCTGCTTGACCGGATGTTGCCACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  351
J  100.0% (53/53)   IGHJ6*02     10   ----------------------------.....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_156384

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         367     6e-104
IGHD4-17*01                                                                                           21.8    0.040 
IGHJ5*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGACTACGGTG	GTGACTC	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATGACTACGGTGGTGACTCCAATTGGTTCGACCCC	VRDDYGGDSNWFDP	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	243	8	0	96.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  R  G 
                    Query_7102     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  96.8% (243/251)  IGHV4-30-2*01  49   .....................................................................................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  S  Y  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_7102     91   CTGGAGTGGATTGGGTACATCTATCATAGTGGGAGCTCCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCAATAGACACGTCC  180
V  96.8% (243/251)  IGHV4-30-2*01  139  ....................................A.....................................A...G......G....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  D  D  Y  G  G  D  S 
                    Query_7102     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGTCAGAGATGACTACGGTGGTGACTCC  270
V  96.8% (243/251)  IGHV4-30-2*01  229  .....................................................G.....C....C......-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD4-17*01    1    -----------------------------------------------------------------------...........--------  11
J  97.9% (47/48)    IGHJ5*02       2    -----------------------------------------------------------------------------------------.  2

                                        -------------->                                
                                         N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7102     271  AATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  317
J  97.9% (47/48)    IGHJ5*02       3    ..C............................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_156385

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           343     2e-96
IGHD3-9*01                                                                                            44.9    5e-09
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	TCTCCGAAGCC	TATTACGATATTATGACTGATTATTATAA	GGGGGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CTCAGAGTCTCCGAAGCCTATTACGATATTATGACTGATTATTATAAGGGGGCTTTTGACTTC	LRVSEAYYDIMTDYYKGAFDF	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	4	3	0	57.1
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_7103   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTACTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-74*01  47   ........................................C....G..........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  S  R  I  S  S  D  G  S  K  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7103   91   CTTGGGTCTCACGTATCAGTAGTGATGGGAGTAAGACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (234/249)  IGHV3-74*01  137  TG..............T.A..............GC....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  L  R  V  S  E  A  Y  Y  D  
                    Query_7103   181  AGAACACGCTCTATCTGCAAATGAACAGTCTGAGAGACGAGGACACGGCTGTGTATTACTGTCTCAGAGTCTCCGAAGCCTATTACGATA  270
V  94.0% (234/249)  IGHV3-74*01  227  ..........G.........................C.........................GCA....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.1% (27/29)    IGHD3-9*01   2    --------------------------------------------------------------------------------..........  11

                                      DR3-IMGT-------------------------->                                  
                                      I  M  T  D  Y  Y  K  G  A  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7103   271  TTATGACTGATTATTATAAGGGGGCTTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  93.1% (27/29)    IGHD3-9*01   12   ..T......G.........--------------------------------------------------  30
J  97.7% (42/43)    IGHJ4*02     6    --------------------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_156386

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            366     2e-103
IGHD6-13*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGACG	GCAGCACCTGG	CTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGACGGCAGCACCTGGCTCCTTGACTAC	ARDDGSTWLLDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	262	28	0	90.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  L  S  C  K  A  S  G  Y  T  F  N  K  H 
                    Query_7104   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGCTTTCCTGCAAGGCTTCTGGGTACACCTTCAATAAGCAT  91
V  90.3% (262/290)  IGHV1-3*01   7    .....T...........G.................................G...................A..........C..GCT..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  M  Q  W  V  R  Q  A  P  G  Q  S  L  E  W  M  G  W  I  N  T  D  S  G  E  T  I  Y  S  Q 
                    Query_7104   92   GCTATGCAATGGGTGCGCCAGGCCCCCGGACAAAGCCTTGAGTGGATGGGTTGGATCAACACTGACAGTGGTGAAACAATATATTCACAG  181
V  90.3% (262/290)  IGHV1-3*01   97   ........T..........................G..............A.........G...G..A....A.C....A..........  186
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  L  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  I  S  L  N  L  E  D  T  A 
                    Query_7104   182  AGGTTACAGGGCAGAGTCACCATAACCAGGGACACATCCGCGAGTACAGCCTACATGGAGCTGATTAGCCTGAATCTTGAAGACACGGCT  271
V  90.3% (262/290)  IGHV1-3*01   187  .A...C.................T....................C...................GC.......GATC.............  276
                                       K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  D  D  G  S  T  W  L  L  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_7104   272  GTCTATTACTGTGCGAGAGACGACGGCAGCACCTGGCTCCTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCTTCAG  353
V  90.3% (262/290)  IGHV1-3*01   277  ..G.................--------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                 
D  90.9% (10/11)    IGHD6-13*01  8    -------------------------......G....----------------------------------------------  18
J  95.2% (40/42)    IGHJ4*02     7    ----------------------------------------.............................A.......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_156387

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           357     1e-100
IGHD6-13*01                                                                                           18.0    0.63  
IGHJ5*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGTGG	GCAGCAGCT	ACA	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGTGGGCAGCAGCTACACGACCAC	AKDRGQQLHDH	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	259	31	0	89.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_7105   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACTTCCTAT  91
V  89.3% (259/290)  IGHV1-18*01  7    .................................................A.................................CAG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  S  W  V  R  Q  A  P  G  G  G  L  E  W  M  G  W  S  G  P  N  N  D  D  A  H  Y  G  H 
                    Query_7105   92   GGTGTCAGCTGGGTGCGCCAGGCCCCTGGAGGAGGGCTTGAATGGATGGGATGGAGCGGCCCTAACAATGATGACGCACACTATGGACAT  181
V  89.3% (259/290)  IGHV1-18*01  97   ...A.............A............CA.........G.............T.A..G..T......G.A..A..A......C...G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  L  R  G  R  V  T  I  T  T  D  T  S  T  T  T  S  F  M  E  L  R  S  L  R  S  A  D  T  A 
                    Query_7105   182  AGCCTCCGGGGCAGAGTCACCATTACCACAGACACATCAACGACCACATCCTTCATGGAGTTGAGGAGCCTGAGATCTGCCGACACGGCC  271
V  89.3% (259/290)  IGHV1-18*01  187  .AG....A...............G..............C....G....G...A.......C..................A..........  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  K  D  R  G  Q  Q  L  H  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7105   272  GTATATTACTGTGCGAAAGATCGTGGGCAGCAGCTACACGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  89.3% (259/290)  IGHV1-18*01  277  ..G.............G...-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (9/9)     IGHD6-13*01  8    --------------------------.........--------------------------------------------  16
J  97.6% (40/41)    IGHJ5*02     11   --------------------------------------.....C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_156380

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            310     1e-86
IGHD3-10*01                                                                                           12.2    32   
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GGGGAG	GGGGAATG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGAGGGGGAATGTACTACTACCACGGTTTGGACGTG	ARGGGGMYYYHGLDV	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	24	3	3	80
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	226	21	3	90.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  V  I  S  G  D  S  V  S  S  T  T  N  W  W  T  W  V  R  Q  P  P  G  K  G 
                    Query_7106   1    ACCCTGTCCCTCACCTGCGTTATCTCTGGTGACTCCGTCAGCAGTACGACTAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGG  90
V  90.4% (226/250)  IGHV4-4*02   49   ...................C.G.........G....A.........G---...........G............................  135
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S     N  W  W  S  W  V  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       P  Q  W  I  G  E  I  L  H  T  G  S  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  I  H  K  S 
                    Query_7106   91   CCGCAATGGATTGGGGAAATCCTTCATACTGGGAGTACCAACTACGACCCGTCCCTCAAGAGTCGAGTCACCATATCAATACACAAGTCC  180
V  90.4% (226/250)  IGHV4-4*02   136  .T.G.G...............TA.....G......C.........A................................G..G........  225
                                       L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       E  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  G  M  Y  Y 
                    Query_7106   181  GAGAATCAGTTTTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGCGAGGGGGAGGGGGAATGTACTAC  270
V  90.4% (226/250)  IGHV4-4*02   226  A....C.....C.............G........................................A...--------------------  295
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01  16   ----------------------------------------------------------------------......--------------  21
J  94.7% (54/57)    IGHJ6*02     6    ------------------------------------------------------------------------------------......  11

                                      ----------------->                                 
                                       Y  H  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7106   271  TACCACGGTTTGGACGTGTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  321
J  94.7% (54/57)    IGHJ6*02     12   ...T.....A.......C.................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_156381

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           375     3e-106
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAC	TATTACTATCGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTATTACTATCGTTCGGGGAGTTATTTTGACTAC	ARGHYYYRSGSYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_7107   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.0% (245/250)  IGHV4-31*03  49   .............................................................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7107   91   CTGGAGTGGATTGGGTACATTTATTACAGCGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATTTCAGTAGACACGTCT  180
V  98.0% (245/250)  IGHV4-31*03  139  ....................C........T............................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  S  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  Y  Y  Y  R  S 
                    Query_7107   181  AAGAACCAGTCCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTATTACTATCGTTCG  270
V  98.0% (245/250)  IGHV4-31*03  229  ..........T...........................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.8% (23/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------.........G.....  16

                                      ----------------->                                  
                                       G  S  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7107   271  GGGAGTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  95.8% (23/24)    IGHD3-10*01  17   .........-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    ---------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_267088

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           313     2e-87
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGAGGCAAATGCTC	TGGTTCGG	TGTGGGTAAAAACG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGAGGCAAATGCTCTGGTTCGGTGTGGGTAAAAACGACTTTGATTCC	AKPRQMLWFGVGKNDFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	224	24	0	90.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  N  N  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7108   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAACAACTTTGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGG  90
V  90.3% (224/248)  IGHV3-30*18  47   ....................................C.....GT.G..A...C................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  E  G  S  K  K  F  Y  A  D  S  L  R  G  R  F  T  I  S  K  D  N  S  
                    Query_7108   91   AGTGGGTGGCAGTGATATCTTATGAGGGAAGTAAGAAGTTCTATGCAGACTCCTTGAGGGGCCGATTTACCATCTCCAAAGACAATTCCA  180
V  90.3% (224/248)  IGHV3-30*18  137  .............T.....A.....T........T..A.A.............G...A.........C..........G...........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  F  L  Q  M  S  S  L  T  T  E  D  T  A  V  Y  F  C  A  K  P  R  Q  M  L  W  F  
                    Query_7108   181  AGAACACACTGTTTCTGCAAATGAGCAGCCTGACAACTGAGGACACGGCTGTCTATTTCTGTGCGAAACCGAGGCAAATGCTCTGGTTCG  270
V  90.3% (224/248)  IGHV3-30*18  227  .......G....A...........A........G.G................G....A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD3-10*01  10   -----------------------------------------------------------------------------------.......  16

                                      IMGT--------------------->                                 
                                      G  V  G  K  N  D  F  D  S  G  G  Q  G  T  L  F  S  V  P  S 
                    Query_7108   271  GTGTGGGTAAAAACGACTTTGATTCCGGGGGCCAGGGAACCCTGTTCTCCGTCCCCTCA  329
D  100.0% (8/8)     IGHD3-10*01  17   .----------------------------------------------------------  17
J  86.4% (38/44)    IGHJ4*02     4    ---------------.......C.A.T.................G..A.....T.....  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_267089

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           291     5e-81
IGHD3-22*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAC	ATAGTACTGG	CCGAATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATAGTACTGGCCGAATCATTGACTAT	ARAHSTGRIIDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G 
                    Query_7109   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  87.2% (218/250)  IGHV4-31*01  49   ...................C................A...G.A....TGG..A...C....G.............CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  Y  I  Y  H  V  E  S  T  S  R  N  P  S  L  K  S  Q  L  T  I  S  L  D  P  S 
                    Query_7109   91   CTGGAGTGGATGGGATACATCTATCACGTTGAGAGCACCTCCCGCAACCCGTCCCTCAAGAGTCAACTTACCATTTCACTCGACCCGTCT  180
V  87.2% (218/250)  IGHV4-31*01  139  ...........T..G.........T..AG..G........A.TA....................T.G.......A...G.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  S  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  S  T  G  R  I 
                    Query_7109   181  AAGAGCCAGTTCTCCCTAAAACTGACCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCACATAGTACTGGCCGAATC  270
V  87.2% (218/250)  IGHV4-31*01  229  ....A............G..G....G....G.......................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-22*01  12   -------------------------------------------------------------------------......G...-------  21

                                      -------->                                  
                                       I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7109   271  ATTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.6% (41/42)    IGHJ4*02     7    -.......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_126888

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           336     1e-94
IGHD3-16*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAATC	TTGGGGGAG	CCGACCAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAATCTTGGGGGAGCCGACCAGATTGACTAC	ARVNLGGADQIDY	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  S  G  S  H  Y  W  S  W  M  R  Q  P  P  G  K  G  
                    Query_7110   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCGTCAGTAGTGGTAGTCACTACTGGAGCTGGATGCGGCAGCCCCCAGGGAAGGGAC  93
V  93.2% (232/249)  IGHV4-61*01  50   .....TCC...A....C.......................C.........T................C......................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  N  Y  E  P  S  L  K  S  R  V  T  I  S  L  D  T  S  
                    Query_7110   94   TGGAGTGGATTGGGAATATCTATTATAGTGGGAGCACCAACTACGAACCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCA  183
V  93.2% (232/249)  IGHV4-61*01  140  ..............T..........C..................A.C..............................G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  Q  F  S  L  K  L  N  S  L  T  A  A  D  T  A  V  Y  F  C  A  R  V  N  L  G  G  A  D  
                    Query_7110   184  AGAACCAGTTCTCCCTGAAACTGAACTCTTTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGTTAATCTTGGGGGAGCCGACC  273
V  93.2% (232/249)  IGHV4-61*01  230  ...................G....G....G...........................A...........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD3-16*01  16   ---------------------------------------------------------------------------.........------  24

                                      ---------->                                  
                                      Q  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7110   274  AGATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (42/42)   IGHJ4*02     7    ---..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_126889

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_7111   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_7111   91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_7111   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_7111   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_186089

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCCCTACGGTAAGGACGTC	ARHGDDTGGYLYYPYGKDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_7112   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCCACTTA  90
V  96.2% (280/291)  IGHV5-51*01  6    ..................................................................................A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  P
                    Query_7112   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  96.2% (280/291)  IGHV5-51*01  96   C.......G.................................................T.................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_7112   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  96.2% (280/291)  IGHV5-51*01  186  .......C.....................C...........................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  P  Y  G  K  D  V  W  G  Q  G  T  T  V
                    Query_7112   271  CATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCCCTACGGTAAGGACGTCTGGGGCCAAGGGACCACGGT  360
V  96.2% (280/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD1-26*01  4    -----------------------------...G....A.....-----------------------------------------------  17
J  93.0% (53/57)    IGHJ6*02     6    ----------------------------------------------......TA........T...........................  49

                                                   
                                        T  V  S  S 
                    Query_7112   361  CACCGTCTCGTCA  373
J  93.0% (53/57)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_126884

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           316     2e-88
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	222	20	0	91.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_7113   4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAGT  93
V  91.7% (222/242)  IGHV4-34*01  50   .....TCC...A...................G...T..................G...........................G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  I  S  L  D  M  S  K  N  
                    Query_7113   94   GGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGAGTCTCCATTTCATTAGACATGTCCAAGAACC  183
V  91.7% (222/242)  IGHV4-34*01  140  ............................C..................C..A...........A....A...G......C...........  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  V  K  M  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y  
                    Query_7113   184  AGTTCTCCGTGAAGATGACGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAACCGTAAAGGGGGTTATTACTGTCTACC  273
V  91.7% (222/242)  IGHV4-34*01  230  ........C.....C...GC..........................G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD3-22*01  20   -------------------------------------------------------------------------..........-------  29

                                      ------------------->                                 
                                      Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7113   274  AGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (40/40)   IGHJ6*02     23   -------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_186087

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           315     5e-88
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGACA	GTTCGAT	TATTATGA	GGGTTCTACTTACCCAAGA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACAGTTCGATTATTATGAGGGTTCTACTTACCCAAGATACTTTGACTCC	RDSSIIMRVLLTQDTLTP	237	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	26	27	26	0	1	96.3
CDR1-IMGT	27	50	24	19	5	0	79.2
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	122	21	20	1	0	95.2
FR3-IMGT	123	236	114	104	10	0	91.2
CDR3-IMGT (germline)	237	244	8	7	1	0	87.5
Total	N/A	N/A	245	225	19	1	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S   P  P  A  L  S  L  V  A  P  S  V  V  F  S  G  V  G  S  G  S  P  Q  G  G  D  W  S
                    Query_7114   1    ACCCTGTCCC-CACCTGCACTGTCTCTGGTGGCTCCGTCAGTGGTTTTTTCTGGAGTTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  89
V  91.8% (225/245)  IGHV4-59*08  49   ..........T.........................A.....A...AC.A......C......................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                        G  L  G  I  S  F  T  V  G  A  P  T  T  T  T  P  S  R  V  G  S  P  C  *  *  T  R  P  R  I
                    Query_7114   90   TGGATTGGGTATATCTTTTACAGTGGGAGCACCAACTACAACCACTCCCTCAAGAGTCGGGTCACCATGTTAGTAGACACGTCCAAGAAT  179
V  91.8% (225/245)  IGHV4-59*08  139  ................A..........................C...............A........A.C..................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                        S  S  P  *  G  *  G  L  *  P  P  Q  T  R  P  Y  I  T  V  R  D  S  S  I  I  M  R  V  L  L
                    Query_7114   180  CAGTTCTCCCTGAGGCTGAGGTCTATGACCGCCTCAGACACGGCCGTATATTACTGTGCGCGACAGTTCGATTATTATGAGGGTTCTACT  269
V  91.8% (225/245)  IGHV4-59*08  229  .............A......C...G........G.............G............A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-16*01  2    ------------------------------------------------------------------------........----------  9

                                      -------------------->                                  
                                        T  Q  D  T  L  T  P  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_7114   270  TACCCAAGATACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.8% (45/46)    IGHJ4*02     3    ---------..........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_186084

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           343     2e-96
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGGTTT	TAGTAGTGCTTATTACT	GGCTTAAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGTTTTAGTAGTGCTTATTACTGGCTTAATTACTTTGACTGC	AKGFSSAYYWLNYFDC	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7115   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAATTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (233/247)  IGHV3-23*01  47   ..........................................G..GC..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  A  G  T  N  T  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_7115   91   AGTGGGTCTCAGGTATTAGTGGTGCTGGTACTAACACATACTACGCAGACTCCGTGCAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.3% (233/247)  IGHV3-23*01  137  ............C..........AG....GG..G......................A.................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  G  F  S  S  A  Y  Y  
                    Query_7115   181  AGAACACGCTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTTCTGTGCGAAGGGTTTTAGTAGTGCTTATTACT  270
V  94.3% (233/247)  IGHV3-23*01  227  ............A.......................................A....A.........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.1% (16/17)    IGHD3-22*01  13   -------------------------------------------------------------------------........G........  29

                                      T------------------>                                  
                                      W  L  N  Y  F  D  C  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_7115   271  GGCTTAATTACTTTGACTGCTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  324
J  95.7% (44/46)    IGHJ4*02     3    --------..........A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_126887

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           325     3e-91
IGHD3-3*01                                                                                            21.8    0.042
IGHJ5*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGATGGGGAAGGG	ACGATTTTTGG	GATGGGGTGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCGATGGGGAAGGGACGATTTTTGGGATGGGGTGAGGTTCGACTCT	ARDRWGRDDFWDGVRFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  S  L  T  G  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7116   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCAGCCTCACAGGCTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-48*03  47   ........................C...........C.T...GTA.T...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  S  G  S  T  R  H  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  A  
                    Query_7116   91   AATGGATCTCATACATCAGTAGTAGTGGCAGTACCAGACATTACGCAGACTCTGTGAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  91.6% (229/250)  IGHV3-48*03  137  .G...G.T........T...........T.......T.T.C........................T........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  R  W  G  R  D  D  
                    Query_7116   181  AGAACTCACTATATTTGGAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGAGACCGATGGGGAAGGGACGATT  270
V  91.6% (229/250)  IGHV3-48*03  227  ..........G...C..C..................C.................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-3*01   6    ------------------------------------------------------------------------------------......  11

                                      IMGT--------------------->                                  
                                      F  W  D  G  V  R  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_7116   271  TTTGGGATGGGGTGAGGTTCGACTCTTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  330
D  100.0% (11/11)   IGHD3-3*01   12   .....-------------------------------------------------------  16
J  93.3% (42/45)    IGHJ5*01     7    ---------------..........C........A....C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_186082

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           305     3e-85
IGHD3-22*01                                                                                           31.5    6e-05
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTGGCCCTTCTTTTGGGGGAG	ACTATGATAGCAGTGGTTA	CCAGCAAGGGAC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCTGGCCCTTCTTTTGGGGGAGACTATGATAGCAGTGGTTACCAGCAAGGGACCTGGTTGGACCCC	ARAGPSFGGDYDSSGYQQGTWLDP	240	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	24	0	0	100
FR2-IMGT	51	101	51	47	4	0	92.2
CDR2-IMGT	102	125	24	19	5	0	79.2
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	231	213	18	0	92.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  D  Y  Y  M  V  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  C  I  
                    Query_7117   16   GTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGGTATGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATGCATTA  105
V  92.2% (213/231)  IGHV3-11*06  65   ......................................AGC...........................................A.....  154
                                         A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  T  F  S  T  Y  T  S  Y  A  G  S  V  E  G  R  F  T  V  S  R  D  N  G  R  N  S  L  Y  L  
                    Query_7117   106  GTACTTTCAGTACTTACACAAGCTACGCAGGCTCTGTGGAGGGCCGTTTCACCGTCTCCAGAGACAACGGCAGGAACTCACTGTATCTGC  195
V  92.2% (213/231)  IGHV3-11*06  155  ...G.AGT....G........A........A.......A.......A......A...............C..A.................  244
                                      S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-------------------------------CDR3-IMGT-----
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  G  P  S  F  G  G  D  Y  D  S  S  G  
                    Query_7117   196  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGCGAGCTGGCCCTTCTTTTGGGGGAGACTATGATAGCAGTGGTT  285
V  92.2% (213/231)  IGHV3-11*06  245  ..................................G............A...---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  94.7% (18/19)    IGHD3-22*01  6    ------------------------------------------------------------------------..........T.......  23

                                      ------------------------->                                  
                                      Y  Q  Q  G  T  W  L  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_7117   286  ACCAGCAAGGGACCTGGTTGGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  345
D  94.7% (18/19)    IGHD3-22*01  24   .-----------------------------------------------------------  24
J  95.7% (45/47)    IGHJ5*02     5    -------------......C..................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_267087

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           336     1e-94
IGHD1-7*01                                                                                            14.1    8.5  
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCAGTTT	GAACTAC	GGCCTTGGTGCAG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCAGTTTGAACTACGGCCTTGGTGCAGTTTTGATATT	ARHQFELRPWCSFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	233	18	0	92.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  N  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_7118   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAATTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  92.8% (233/251)  IGHV4-39*01  49   .............................................A...G.......................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  T  G  L  T  Y  Y  T  P  S  L  E  S  R  L  T  I  S  V  D  T  S 
                    Query_7118   91   CTGGAGTGGATTGGGAGCATCTATTATACTGGGCTCACCTACTACACCCCGTCCCTCGAGAGTCGACTCACCATATCCGTGGACACGTCC  180
V  92.8% (233/251)  IGHV4-39*01  139  .................T..........G....AG...........A..........A........G.............A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  Q  F  S  L  S  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Q  F  E  L  R  P 
                    Query_7118   181  AGAAACCAGTTCTCCCTGAGCCTCAGCTCTGTGACCGCCGCAGATACGGCTGTATATTACTGTGCGAGACATCAGTTTGAACTACGGCCT  270
V  92.8% (233/251)  IGHV4-39*01  229  .AG................AG..G....................C........G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD1-7*01   11   ------------------------------------------------------------------------------.......-----  17

                                      ----------------->                                  
                                       W  C  S  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7118   271  TGGTGCAGTTTTGATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  97.7% (43/44)    IGHJ3*02     7    --------.........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_186080

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD1-26*01                                                                                           12.2    31    
IGHJ4*02                                                                                              58.4    9e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	N/A	TATAGT	CAAGGTAACGGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGATATAGTCAAGGTAACGGAGGAGTTGACAAC	AGYSQGNGGVDN	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  P  G  V  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7119   1    ACCCTGTCCCTCACCTGCACTGTCCCTGGTGTCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.9% (238/243)  IGHV4-59*01  49   ........................T......G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  N  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7119   91   TGGATTGGGTATATCTACAACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  .................TT.......................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  Y  S  Q  G  N  G  G  V  D 
                    Query_7119   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGGGATATAGTCAAGGTAACGGAGGAGTTGAC  270
V  97.9% (238/243)  IGHV4-59*01  229  ............................................................A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-26*01  3    ---------------------------------------------------------------......---------------------  8
J  90.5% (38/42)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       N  G  G  Q  G  A  L  V  N  V  S  S  
                    Query_7119   271  AACGGGGGCCAGGGAGCCCTGGTCAACGTCTCCTCAG  307
J  90.5% (38/42)    IGHJ4*02     12   T..T...........A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_126883

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         350     8e-99
IGHD3-22*01                                                                                           39.1    3e-07
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	G	TTACTATGATAGTAGTGGTT	CCTACCTTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGTTACTATGATAGTAGTGGTTCCTACCTTAACTACTTTGACTAC	ARGYYDSSGSYLNYFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  V  S  I  G  S  G  G  H  Y  W  N  W  I  R  Q  P  P  G  K  G 
                    Query_7120     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGTCTCCATCGGCAGTGGTGGTCACTACTGGAATTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-30-4*01  49   ..................A............G.......A.........A.T.........G............................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  T  S  V  D  T  S 
                    Query_7120     91   CTGGAGTGGATTGGGAACATCTATTACAGTGGGAGTACATACTACAACCCGTCCCTCAAGAGTCGAGTTACCACTTCAGTAGACACGTCC  180
V  94.8% (237/250)  IGHV4-30-4*01  139  ...............T...................C..C..................................TA...............  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  Y  Y  D  S  S  G 
                    Query_7120     181  AAGAACCACTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTCTATTACTGTGCCAGAGGTTACTATGATAGTAGTGGT  270
V  94.8% (237/250)  IGHV4-30-4*01  229  ........G............................................G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (20/20)   IGHD3-22*01    4    -----------------------------------------------------------------------...................  22

                                        MGT-------------------->                                  
                                         S  Y  L  N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7120     271  TCCTACCTTAACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  100.0% (20/20)   IGHD3-22*01    23   .---------------------------------------------------------  23
J  100.0% (48/48)   IGHJ4*02       1    ----------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_343897

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           346     2e-97
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCCAA	GTATAGAAGTGGC	ACCTACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCCAAGTATAGAAGTGGCACCTACTTTTGACTAT	AREPSIEVAPTFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  T  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  R  R 
                    Query_7121   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTACTGGTGGCTACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAGGAGA  90
V  94.0% (236/251)  IGHV4-61*08  49   .........................................C.G......T...........C.................A....A.G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 
                    Query_7121   91   CTGGAGTGGATTGGCTATATCTATTACACTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACAAGTCG  180
V  94.0% (236/251)  IGHV4-61*08  139  ..............G.............G......C............................................A....C...C  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  P  S  I  E  V  A 
                    Query_7121   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGAGCCAAGTATAGAAGTGGCA  270
V  94.0% (236/251)  IGHV4-61*08  229  ...................A.......................................C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD6-19*01  3    ----------------------------------------------------------------------------......C......-  15

                                      -------------->                                  
                                       P  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7121   271  CCTACTTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  97.7% (42/43)    IGHJ4*02     6    ------........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_265829

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         389     2e-110
IGHD6-19*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCTTAAGGTCAATCGCGTC	CAGTGGCTGG	GCGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCA	ARHPLRSIASSGWAS	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	78	72	67	5	0	93.1
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	102	12	0	89.5
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	291	270	21	0	92.8


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  T  F  T  N 
                    Query_7122     7    GTGCAGCTGGTGCAGTCTGGAGGAGAGGTGAAGAAGCCCGGGGAGTCTTTGAGGATTTCCTGTAAGGCTTCTGGATACACCTTTACCAAC  96
V  92.8% (270/291)  IGHV5-10-1*01  4    ......................C.........A...............C.......C..........G...........G........G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  W  I  S  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  R  Y  S 
                    Query_7122     97   TACTGGATCAGCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGACCCTAGTGACTCTTATACCCGCTACAGT  186
V  92.8% (270/291)  IGHV5-10-1*01  94   ........................A.....................................T..................AA......C  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  D  G  N  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  M  A  S  D  T 
                    Query_7122     187  CCGTCCTTCGACGGCAACGTCACCATCTCAGTTGACAAGTCCATCAGTACTGCCTATTTGCAGTGGAGCAGCCTGATGGCCTCGGACACC  276
V  92.8% (270/291)  IGHV5-10-1*01  184  .........C.A...C...............C...............C........CC..................A.............  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><-----------------CDR3-IMGT----------------->                              
                                         A  M  Y  Y  C  A  R  H  P  L  R  S  I  A  S  S  G  W  A  S  W  G  Q  G  T  L  V  T  V  S 
                    Query_7122     277  GCCATGTATTATTGTGCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCATGGGGCCAGGGAACCCTGGTCACCGTCTCC  366
V  92.8% (270/291)  IGHV5-10-1*01  274  ...........C.........---------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                      
D  100.0% (10/10)   IGHD6-19*01    9    --------------------------------------------..........------------------------------------  18
J  100.0% (34/34)   IGHJ4*02       15   ------------------------------------------------------------..............................  44

                                            
                                         S  
                    Query_7122     367  TCAG  370
J  100.0% (34/34)   IGHJ4*02       45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_265822

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           329     3e-92
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTAGGATCCCGAAAAATCT	CTATGATAATAGTGGTTACTACT	TTTTCGCCTTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAGGATCCCGAAAAATCTCTATGATAATAGTGGTTACTACTTTTTCGCCTTTTTTGAATCC	ARLRIPKNLYDNSGYYFFAFFES	244	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  V  S  S  N  N  F  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_7123   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCGTCTCCAGTAATAATTTCTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  92.0% (230/250)  IGHV4-39*01  49   ...................C................A..AG.....G..G..A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  A  D  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  L  V  D  T  S 
                    Query_7123   91   CTGGAGTGGATTGGGAGTGCCGATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTTGGTGGACACGTCC  180
V  92.0% (230/250)  IGHV4-39*01  139  ..................AT.T....T...............................................A.CC..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       R  D  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  R  I  P  K  N  L 
                    Query_7123   181  AGGGACCAGTTCTCCCTAAAGTTGAGCTCTGTGACCGCCGCAGACACGGCTCTGTATTACTGTGCGAGACTTAGGATCCCGAAAAATCTC  270
V  92.0% (230/250)  IGHV4-39*01  229  .A.A.............G...C.............................G..................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.3% (21/23)    IGHD3-22*01  7    -----------------------------------------------------------------------------------------.  7

                                      ---CDR3-IMGT----------------------------->                                  
                                       Y  D  N  S  G  Y  Y  F  F  A  F  F  E  S  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_7123   271  TATGATAATAGTGGTTACTACTTTTTCGCCTTTTTTGAATCCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  346
D  91.3% (21/23)    IGHD3-22*01  8    .......G.........T....------------------------------------------------------  29
J  93.0% (40/43)    IGHJ4*02     6    ---------------------------------.....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_265823

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-16*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCT	TTACGTTTGGGGGAGCTATG	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTTTACGTTTGGGGGAGCTATGGACTACTTTGACTAC	ARGLFTFGGAMDYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  A  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_7124   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCGCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ...............................G.T..........................................A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  S  T  Y  S  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7124   91   CTGGAGTGGATTGGGTACATCTATTACCGTGGGAGCACGTACTCCAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ...........................A..........C....A..............................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  L  S  V  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  F  T  F  G  G 
                    Query_7124   181  AAGAACCAGTTGTCCGTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTATTGTGCGAGAGGCCTCTTTACGTTTGGGGGA  270
V  96.4% (241/250)  IGHV4-31*03  229  ...........C...C...........................................C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-16*01  10   ----------------------------------------------------------------------------..............  23

                                      GT------------------>                                  
                                       A  M  D  Y  F  D  Y  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_7124   271  GCTATGGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  325
D  95.0% (19/20)    IGHD3-16*01  24   .T....-------------------------------------------------  29
J  97.9% (47/48)    IGHJ4*02     1    -------...................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_265820

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHD5-18*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GAAG	ACAGATATGG	GGGACTTTGGACCTGCAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAAGACAGATATGGGGGACTTTGGACCTGCATTACTTTGACTTC	ARGRQIWGTLDLHYFDF	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  P  Y  Y  W  I  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7125   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGTCCTTACTACTGGATCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.2% (225/244)  IGHV4-59*01  49   ..................A............G..........AG...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  H  I  F  Y  T  G  S  T  K  Y  K  P  S  L  K  S  R  V  T  I  S  L  D  R  S  K  N 
                    Query_7125   91   TGGCTTGGCCATATCTTTTACACTGGGAGCACCAAATACAAGCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACAGGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*01  139  ...A....GT......A.....G............C.....C..........................A...G......C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  Q  I  W  G  T  L  D 
                    Query_7125   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAAGACAGATATGGGGGACTTTGGAC  270
V  92.2% (225/244)  IGHV4-59*01  229  .............A......C...........T..........................G....--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD5-18*01  7    --------------------------------------------------------------------....C.....------------  16

                                      ----------------->                                  
                                       L  H  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7125   271  CTGCATTACTTTGACTTCTGGGGCCAGGGCACCCTCGTCACCGTCTCCTCAG  322
J  93.5% (43/46)    IGHJ4*02     3    ------..........A............A.....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_265821

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            360     1e-101
IGHD3-10*01                                                                                           10.3    120   
IGHJ6*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TATATATCCTCTCTACCG	CGGGG	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATATATATATCCTCTCTACCGCGGGGGGTATGGACCTT	AKDIYILSTAGGMDL	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	252	10	10	0	0	100
Total	N/A	N/A	252	241	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  K  A  S  G  F  T  F  N  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7126   1    GGTCCCTGAGACTCTCCTGTAAAGCCTCTGGATTCACCTTTAATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  95.6% (241/252)  IGHV3-9*01   47   ....................GC...................G................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  T  W  N  S  G  S  M  G  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_7126   91   AGTGGGTCTCAGGTATTACTTGGAATAGTGGTAGTATGGGGTATGCGGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  95.6% (241/252)  IGHV3-9*01   137  ..................G...............C..A..C..............................A..................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  K  D  I  Y  I  L  S  T  
                    Query_7126   181  AGAACTCCCTGTATCTCCAAATGAACAGTCTGAGAGTTGAGGACACGGCCTTATATTACTGTGCAAAAGATATATATATCCTCTCTACCG  270
V  95.6% (241/252)  IGHV3-9*01   227  ................G...................C...............G...................------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                      ---------------->                                 
                                      A  G  G  M  D  L  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_7126   271  CGGGGGGTATGGACCTTTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  320
D  100.0% (5/5)     IGHD3-10*01  15   .....---------------------------------------------  19
J  93.3% (42/45)    IGHJ6*02     18   -----.........G.C......................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_265826

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           311     4e-87
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	19	5	0	79.2
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	23	1	0	95.8
FR3-IMGT	124	237	114	107	7	0	93.9
Total	N/A	N/A	225	212	13	0	94.2


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  L  S  G  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 
                    Query_7127   13   TGTGCAGCGTCTGGATTCACGTTGAGTGGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATA  102
V  94.2% (212/225)  IGHV3-33*03  64   ....................C..C...A.C.....C......................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       W  Y  D  G  I  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  F  L 
                    Query_7127   103  TGGTATGATGGAATTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCAAGAACACCCTGTTTCTG  192
V  94.2% (212/225)  IGHV3-33*03  154  .............G....................................................A.............G....A....  243
                                       W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------CDR3-IMGT----------->            
                                       Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  D  P  W  G  Q  G 
                    Query_7127   193  CAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCGACCCCTGGGGCCAGGGA  282
V  94.2% (212/225)  IGHV3-33*03  244  ..A..............................G.G.....C...---------------------------------------------  288
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                                              
D  90.9% (10/11)    IGHD6-13*01  7    --------------------------------------------------....G......-----------------------------  17
J  100.0% (46/46)   IGHJ5*02     6    ------------------------------------------------------------------........................  29

                                                            
                                       T  L  V  T  V  S  S  
                    Query_7127   283  ACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (46/46)   IGHJ5*02     30   ......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_265827

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           336     1e-94
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CATGCTTTCCTCGACTGATATGT	CGTTCGGGGGA	TTTTTGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACATGCTTTCCTCGACTGATATGTCGTTCGGGGGATTTTTGATTGACCAG	ARDMLSSTDMSFGGFLIDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	233	18	0	92.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  S  S  R  S  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_7128   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGACTCCATCAGCAGTAGAAGTTACTACTGGGGCTGGATTCGCCAGTCCCCAGGGAAGGGG  90
V  92.8% (233/251)  IGHV4-39*02  49   ...................C...........G...............T....................C......C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  R  S  T  D  Y  N  P  S  L  E  S  R  V  A  I  S  I  D  T  S 
                    Query_7128   91   CTGGAATGGATTGGGAATATCTATTATAGTAGGAGCACCGACTACAACCCGTCCCTCGAGAGTCGAGTCGCCATATCGATAGACACGTCC  180
V  92.8% (233/251)  IGHV4-39*02  139  .....G..........G.............G........T.................A...........A.......CG...........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  M  L  S  S  T  D 
                    Query_7128   181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACCGCCGCAGACACGGCTATTTATTACTGTGCGAGAGACATGCTTTCCTCGACTGAT  270
V  92.8% (233/251)  IGHV4-39*02  229  ........C............C....C........................G.G.................-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       M  S  F  G  G  F  L  I  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7128   271  ATGTCGTTCGGGGGATTTTTGATTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  90.9% (10/11)    IGHD3-16*01  13   ----....T......-------------------------------------------------  23
J  95.2% (40/42)    IGHJ4*02     7    ----------------------.....T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_265824

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           291     5e-81
IGHD3-10*01                                                                                           25.7    0.003
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCACTTCGGCCC	ATGGTTCGGGGAG	CAGGGGTT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCACTTCGGCCCATGGTTCGGGGAGCAGGGGTTTTTTGATGTC	AKDHFGPWFGEQGFFDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  A  S  Y  D  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_7129   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTGCCAGCTATGACATGAACTGGGTCCGCCAGGCGCCAGGGAGGGGGCTGG  90
V  87.2% (218/250)  IGHV3-23*01  47   ....................................C....AG........C.....G...............T.......A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  A  R  G  G  T  K  S  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  S  
                    Query_7129   91   AGTGGGTCTCCGGTATTAGTGCTAGAGGTGGAACGAAATCATATGCGGACTCTGTGACGGGCCGCTTCACCATCTCCAGAGACAACTCCA  180
V  87.2% (218/250)  IGHV3-23*01  137  ..........A.C........G...T.....T.GC.C..AC..C..A.....C....A......G....................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  E  V  Y  L  Q  M  N  S  L  R  H  E  D  T  A  V  Y  Y  C  A  K  D  H  F  G  P  W  F  
                    Query_7129   181  AGAATGAGGTGTACTTGCAAATGAACAGCCTGAGACACGAAGACACGGCCGTATATTACTGTGCGAAAGACCACTTCGGCCCATGGTTCG  270
V  87.2% (218/250)  IGHV3-23*01  227  ....CAC.C....TC....................GC...G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (13/13)   IGHD3-10*01  9    ----------------------------------------------------------------------------------........  16

                                      GT-------------------->                                  
                                      G  E  Q  G  F  F  D  V  W  G  Q  G  T  K  V  I  V  S  S  
                    Query_7129   271  GGGAGCAGGGGTTTTTTGATGTCTGGGGCCAAGGGACAAAGGTCATCGTCTCTTCAG  327
D  100.0% (13/13)   IGHD3-10*01  17   .....----------------------------------------------------  21
J  95.5% (42/44)    IGHJ3*01     7    -------------..........................T.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_265825

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAACA	TATGACC	TATAGCAGT	AGTCCATTA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATATGACCTATAGCAGTAGTCCATTAGACTAC	AKHMTYSSSPLDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	13	8	0	61.9
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	222	29	0	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  A  S  V  S  S  G  D  Y  Y  W  G  W  I  R  Q  P  P  G  R  G 
                    Query_7130   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCGTCAGTAGTGGTGACTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAGGGGG  90
V  88.4% (222/251)  IGHV4-39*01  49   ..................A............G....A....C...A..AGT..................................A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  Y  N  T  R  Y  P  Y  Y  S  L  S  L  K  S  R  V  T  I  S  V  D  S  S 
                    Query_7130   91   CTGGAGTGGCTTGGGAGTATCTATAATACTAGATATCCCTACTATAGTTTGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACTCGTCC  180
V  88.4% (222/251)  IGHV4-39*01  139  .........A..............T...G.G.GAGCA.......C.ACCC..................................A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  E  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  H  M  T  Y  S  S  S 
                    Query_7130   181  AAGAACGAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTTTATTTCTGTGCGAAACATATGACCTATAGCAGTAGT  270
V  88.4% (222/251)  IGHV4-39*01  229  ......C............A.................................G....A........G...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD6-19*01  4    ------------------------------------------------------------------------------.........---  12

                                      ----------->                                  
                                       P  L  D  Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_7130   271  CCATTAGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCTTCAG  316
J  95.0% (38/40)    IGHJ4*02     9    ------.............A.....................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_21640

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GTCTT	CTATGATATCAGTGCTTATT	CCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTCTTCTATGATATCAGTGCTTATTCCCACTTTGACTAT	AVFYDISAYSHFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	227	13	0	94.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  A  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7131   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGCCGCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.6% (227/240)  IGHV4-59*01  49   .......................C.......G.T........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7131   91   TGGATTGGTTATATCTATCACAGTGGGACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  94.6% (227/240)  IGHV4-59*01  139  ........G.........T.........G...............C.............................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  *  C  A  V  F  Y  D  I  S  A  Y  S  H 
                    Query_7131   181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTCTACTAGTGTGCGGTCTTCTATGATATCAGTGCTTATTCCCAC  270
V  94.6% (227/240)  IGHV4-59*01  229  ...................GC..........................G..T..C......------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  85.0% (17/20)    IGHD3-22*01  7    -----------------------------------------------------------------........GT....G.....-----  26
J  88.1% (37/42)    IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                               
                                       F  D  Y  W  G  P  G  P  L  V  S  L  S  
                    Query_7131   271  TTTGACTATTGGGGCCCGGGACCCCTGGTCTCCCTCTCCT  310
J  88.1% (37/42)    IGHJ4*02     6    ........C.......A....A........A..G......  45


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_12220

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         319     2e-89
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-22*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGG	AGTAGTGGTTATTAC	ATCATCAACTTCTA	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGGAGTAGTGGTTATTACATCATCAACTTCTACGACCCC	RETGVVVITSSTSTTP	242	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	29	27	1	1	93.1
CDR1-IMGT	29	52	24	20	4	0	83.3
FR2-IMGT	53	103	51	45	6	0	88.2
CDR2-IMGT	104	127	24	23	1	0	95.8
FR3-IMGT	128	241	114	106	8	0	93
CDR3-IMGT (germline)	242	249	8	8	0	0	100
Total	N/A	N/A	250	229	20	1	91.6


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L   D  S  P  V  Q  P  L  D  S  A  S  V  T  M  L  C  T  G  S  A  W  L  Q  G  R  G  W 
                    Query_7132     1    GGTCCCTG-GACTCTCCTGTTCAGCCTCTGGATTCCGCTTCAGTGACTATGCTATGCACTGGGTCCGCCTGGCTCCAGGGAAGGGGCTGG  89
V  91.6% (229/250)  IGHV3-30-3*01  47   ........A...........G..............AC.......AG.......................A.........C..........  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                         S  G  *  Q  Q  Y  H  M  M  E  A  V  K  I  T  Q  T  L  *  R  A  D  S  P  S  P  E  T  I  P 
                    Query_7132     90   AGTGGGTGACAACAATATCATATGATGGAAGCAGTAAAAATTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  179
V  91.6% (229/250)  IGHV3-30-3*01  137  ........G..GTT...................A....T.C...........C.....................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                         R  T  R  C  I  C  K  *  T  A  *  D  L  K  T  R  L  C  I  T  V  R  E  T  G  V  V  V  I  T 
                    Query_7132     180  AGGACACGGTGCATCTGCAAATGAACAGCCTGAGACCTGAAGACACGGCTGTGTATTACTGTGCGAGAGACGGGAGTAGTGGTTATTACA  269
V  91.6% (229/250)  IGHV3-30-3*01  227  ..A.....C..T.......................G....G.............................--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01    14   --------------------------------------------------------------------------...............-  28

                                        T------------------>                                  
                                         S  S  T  S  T  T  P  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_7132     270  TCATCAACTTCTACGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  323
J  100.0% (41/41)   IGHJ5*02       11   -------------.........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_12223

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTGC	AKDNTYSSGYSPLDC	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  L  R  Q  A  P  G  K  G  P  
                    Query_7133   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGCTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...G........................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_7133   91   AGTGGGTCTCAGCGATTACTGGGAGTGGTAGTAGCACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  .............T....G...T......G..............G......................................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_7133   181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  93.6% (234/250)  IGHV3-23*01  227  ...............................G....................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                
                                      Y  S  P  L  D  C  W  G  R  G  T  L  V  P  V  S  S
                    Query_7133   271  ATTCACCCCTTGACTGCTGGGGCCGGGGAACCCTGGTCCCCGTCTCCTC  319
D  100.0% (10/10)   IGHD3-22*01  24   ...----------------------------------------------  26
J  92.5% (37/40)    IGHJ4*02     7    ---------......A........A.............A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_12225

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	290	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	70	4	0	94.6
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	294	5	5	0	0	100
Total	N/A	N/A	292	275	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  
                    Query_7134   3    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCA  92
V  94.2% (275/292)  IGHV5-51*01  2    ....G........G...................................................A...G............C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  H  W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  
                    Query_7134   93   CCCACTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACA  182
V  94.2% (275/292)  IGHV5-51*01  92   G.T......................G.T..........................G..............G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  H  V  T  T  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  
                    Query_7134   183  GCCCGTCCTTCCAAGGCCACGTCACCACCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACA  272
V  94.2% (275/292)  IGHV5-51*01  182  ...................G.......T.................T.........................A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------CDR3-IMGT--------->                                 
                                      T  A  I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7134   273  CCGCCATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  352
V  94.2% (275/292)  IGHV5-51*01  272  .......G..T...........----------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ----------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_12226

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           402     3e-114
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_7135   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCTTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  94.5% (273/289)  IGHV5-51*03  6    .........................................................C...................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_7135   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  94.5% (273/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  R  S  I  T  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_7135   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAGGTCCATCACGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  94.5% (273/289)  IGHV5-51*03  186  ...............G...................A........GC...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7135   271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  94.5% (273/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_7135   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_12229

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           321     6e-90
IGHD3-10*01                                                                                           16.1    2.1  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	TTCGCG	ATGTTTCGGGG	TTCAGGG	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCATTCGCGATGTTTCGGGGTTCAGGGGGTATGGACGTC	AFAMFRGSGGMDV	237	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	106	8	0	93
CDR3-IMGT (germline)	237	239	3	3	0	0	100
Total	N/A	N/A	227	216	11	0	95.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  S  S  Y  R  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  
                    Query_7136   13   GTACAGCCTCTGGATTCACCTTCAGTAGCTACCGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGTATTA  102
V  95.2% (216/227)  IGHV3-74*01  65   ..G.............................T.........................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      K  S  D  G  S  S  T  Y  Y  A  D  S  V  K  G  R  V  T  I  S  R  N  N  A  K  N  T  L  Y  L  
                    Query_7136   103  AGAGTGATGGGAGTAGCACATACTACGCGGACTCCGTGAAGGGCCGAGTCACCATCTCCAGAAACAACGCCAAGAACACACTGTATCTGC  192
V  95.2% (216/227)  IGHV3-74*01  155  .T..................AG.........................T..............G................G..........  244
                                      N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------CDR3-IMGT-------------->       
                                      Q  I  N  S  L  R  A  G  D  T  A  V  Y  C  C  A  F  A  M  F  R  G  S  G  G  M  D  V  W  G  
                    Query_7136   193  AAATAAACAGTCTGAGAGCCGGGGACACGGCTGTGTATTGCTGTGCATTCGCGATGTTTCGGGGTTCAGGGGGTATGGACGTCTGGGGCC  282
V  95.2% (216/227)  IGHV3-74*01  245  ....G................A.................A.......-------------------------------------------  291
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  90.9% (10/11)    IGHD3-10*01  9    -----------------------------------------------------...G.......--------------------------  19
J  97.8% (44/45)    IGHJ6*02     18   -----------------------------------------------------------------------...................  36

                                                                
                                      Q  G  T  T  V  P  V  S  S 
                    Query_7136   283  AAGGGACCACGGTCCCCGTCTCCTCA  308
J  97.8% (44/45)    IGHJ6*02     37   ..............A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_73845

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           299     2e-83
IGHD3-10*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGC	GGTTCGGGGA	CTTCTAGCGCCCTTCGCGGT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGCGGTTCGGGGACTTCTAGCGCCCTTCGCGGTTAC	ARAGGSGTSSALRGY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	96	18	0	84.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	220	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7137   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  88.4% (220/249)  IGHV3-30*03  47   ....................................CC........C...G.....C......................C..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  V  S  Y  D  G  S  D  Q  I  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_7137   91   AGTGGGTGGCAGTTGTATCATATGATGGAAGCGATCAGATCTACGCGGACTCTGTGAAGGGCCGATTCACCGTGTCCAGAGACAATTCCA  180
V  88.4% (220/249)  IGHV3-30*03  137  ..............A................TA..A.ATA...T..A.....C..................A.C................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  D  T  L  Y  L  E  M  I  T  V  R  P  E  D  T  G  L  Y  Y  C  A  R  A  G  G  S  G  T  S  
                    Query_7137   181  AGGACACCCTGTATCTGGAAATGATCACCGTGAGACCTGAGGACACAGGTCTCTATTACTGTGCGAGAGCGGGCGGTTCGGGGACTTCTA  270
V  88.4% (220/249)  IGHV3-30*03  227  ..A....G.........C......A..G.C.....G..........G.C.G.G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-10*01  11   --------------------------------------------------------------------------..........------  20

                                      ---------------->                                  
                                      S  A  L  R  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7137   271  GCGCCCTTCGCGGTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (37/37)   IGHJ4*02     12   --------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_278818

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           380     1e-107
IGHD6-25*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACAGTCACCGGCTTCACTGGT	CGGCTAC	CAA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACAGTCACCGGCTTCACTGGTCGGCTACCAAGACTAC	ARVQSPASLVGYQDY	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	69	2	0	97.2
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	99	15	0	86.8
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  R  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  N  
                    Query_7138   7    TGCAGCTGGTGCAGTCTGGGGCTGAGGTGAGGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCGGGAGGCACCTTCAGCAACT  96
V  91.8% (267/291)  IGHV1-69*01  5    ..............................A.......................................T................G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  F  M  P  I  F  G  A  A  D  Y  A  
                    Query_7138   97   ATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGTTCATGCCTATCTTTGGTGCAGCGGACTACGCCC  186
V  91.8% (267/291)  IGHV1-69*01  95   ...C.................................G..................A....C............A....AA.......A.  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  D  R  A  T  I  T  A  D  E  S  T  G  T  S  Y  M  E  L  R  N  L  K  S  E  D  T  
                    Query_7138   187  AGAAGTTCCAAGACAGAGCCACCATTACCGCGGACGAATCCACGGGCACATCCTATATGGAACTGAGGAACCTGAAATCTGAAGACACGG  276
V  91.8% (267/291)  IGHV1-69*01  185  ..........G.G.....T...G.....................A.....G....C.....G.....C.G.....G......G.......  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-----------------CDR3-IMGT----------------->                               
                                      A  V  Y  Y  C  A  R  V  Q  S  P  A  S  L  V  G  Y  Q  D  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_7138   277  CCGTATATTACTGTGCGAGAGTACAGTCACCGGCTTCACTGGTCGGCTACCAAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  366
V  91.8% (267/291)  IGHV1-69*01  275  ....G................---------------------------------------------------------------------  295
                                      A  V  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD6-25*01  12   -------------------------------------------.......----------------------------------------  18
J  100.0% (40/40)   IGHJ4*02     9    -----------------------------------------------------.....................................  45

                                         
                                      S  
                    Query_7138   367  CAG  369
J  100.0% (40/40)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_121016

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD1-26*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTGTTTTC	TGGGACCTACTAC	CTTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTAC	ARVFSGTYYLLDY	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	70	4	0	94.6
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	111	3	0	97.4
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	280	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  T  A  F  G  Y  S  F  T  
                    Query_7139   5    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTACGGCTTTTGGATACAGCTTTACCA  94
V  95.6% (280/293)  IGHV5-51*03  2    ....G.............................................................A..G..C.................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  R  D  G  E  T  R  Y  
                    Query_7139   95   GTTATTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTCGTGACGGTGAAACCAGATACA  184
V  95.6% (280/293)  IGHV5-51*03  92   .C..C...............................................................G.....TC...T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  
                    Query_7139   185  GCCCGTCCTTCCAAGGCCAGGTCAGCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACA  274
V  95.6% (280/293)  IGHV5-51*03  182  ........................C....................................................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                
                                      T  A  M  Y  Y  C  A  R  V  F  S  G  T  Y  Y  L  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7139   275  CCGCCATGTATTATTGTGCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  362
V  95.6% (280/293)  IGHV5-51*03  272  .............C.........-----------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                  
D  92.3% (12/13)    IGHD1-26*01  8    -------------------------------.....G.......--------------------------------------------  20
J  100.0% (40/40)   IGHJ4*02     7    ------------------------------------------------........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_121017

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         438     5e-125
IGHD2-21*02                                                                                           50.7    9e-11 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTGG	GCATATTGTGGTGGTGACTGCTATTC	AC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTGGGCATATTGTGGTGGTGACTGCTATTCACTTGACTAC	ARWAYCGGDCYSLDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	284	4	0	98.6


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_7140     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGCGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTA  90
V  98.6% (284/288)  IGHV5-10-1*01  6    .................................................A....................................G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  Q  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_7140     91   CTGGATCAGCTGGGTGCGCCAGATGCCCGGGCAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  98.6% (284/288)  IGHV5-10-1*01  96   ...............................A..........................................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7140     181  GTCCTTCCAAGGCCACGTCACCGTCTCAGCTGACAAGTCCATCAGCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.6% (284/288)  IGHV5-10-1*01  186  ......................A...................................................................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          M  Y  Y  C  A  R  W  A  Y  C  G  G  D  C  Y  S  L  D  Y  W  G  Q  G  T  P  V  T  V  S  S
                    Query_7140     271  CATGTATTACTGTGCGAGGTGGGCATATTGTGGTGGTGACTGCTATTCACTTGACTACTGGGGCCAGGGAACCCCGGTCACCGTCTCCTC  360
V  98.6% (284/288)  IGHV5-10-1*01  276  ..................------------------------------------------------------------------------  293
                                          M  Y  Y  C  A                                                                           
D  100.0% (26/26)   IGHD2-21*02    2    ----------------------..........................------------------------------------------  27
J  97.6% (41/42)    IGHJ4*02       7    --------------------------------------------------........................T...............  46

                                          
                                          
                    Query_7140     361  AG  362
J  97.6% (41/42)    IGHJ4*02       47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_11844

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         377     1e-106
IGHD4-4*01                                                                                            14.1    9.5   
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-4*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATAGAGAC	GACTATAGTA	CGTCGTCCTC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAGAGACGACTATAGTACGTCGTCCTCCGACCCC	ARHRDDYSTSSSDP	290	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	76	72	70	2	0	97.2
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	103	11	0	90.4
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	291	266	25	0	91.4


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  A  N 
                    Query_7141     5    GTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCAGGATACAGCTTTGCTAAT  94
V  91.4% (266/291)  IGHV5-10-1*01  4    ..G....................................................................T............A.C.GC  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         H  W  I  T  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  M  L  D  P  S  D  S  Y  S  N  Y  S 
                    Query_7141     95   CACTGGATCACCTGGGTCCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGATGCTTGATCCCAGTGACTCTTATAGCAACTACAGT  184
V  91.4% (266/291)  IGHV5-10-1*01  94   T.........G......G......A..............................G.A.......T.............C.........C  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  Q  G  H  V  T  F  S  A  D  K  T  I  N  T  A  Y  L  H  W  S  G  R  K  A  S  A  P 
                    Query_7141     185  CCGTCCTTCCAAGGCCACGTCACCTTCTCAGCTGACAAGACCATCAACACTGCCTACCTACATTGGAGCGGCCGGAAGGCCTCGGCCCCC  274
V  91.4% (266/291)  IGHV5-10-1*01  184  ........................A..............T......G............G..G......A...T...........A.A..  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><----------------CDR3-IMGT--------------->                                 
                                         A  I  Y  Y  C  A  R  H  R  D  D  Y  S  T  S  S  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_7141     275  GCCATATATTACTGTGCGAGACATAGAGACGACTATAGTACGTCGTCCTCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  364
V  91.4% (266/291)  IGHV5-10-1*01  274  .....G...............---------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                      
D  90.0% (9/10)     IGHD4-4*01     2    ------------------------------.....C....--------------------------------------------------  11
J  100.0% (41/41)   IGHJ5*02       11   --------------------------------------------------........................................  50

                                         
                                         
                    Query_7141     365  G  365
J  100.0% (41/41)   IGHJ5*02       51   .  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_121014

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           339     2e-95
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATCGTGGTG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATCGTGGTGACTACTTTGACCAC	ARGLHYYDRGDYFDH	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  R  V  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_7142   4    CCCTGAGACTCTCCTGTACTGTCTCTCGTGTCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  93.6% (233/249)  IGHV4-31*02  50   .....TCC...A..............G...G...................T.......................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  I  T  I  S  V  D  T  S  
                    Query_7142   94   TGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAATAAGTCCCTCAAGAGTCGAATTACCATATCGGTAGACACGTCTA  183
V  93.6% (233/249)  IGHV4-31*02  140  .................................G............CCC................G..........A.............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R  
                    Query_7142   184  AGAACCAGTTCTCCCTGACGCTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCCATTACTATGATCGTG  273
V  93.6% (233/249)  IGHV4-31*02  230  ..................A.....G...........................G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  3    ---------------------------------------------------------------------------...........A..A  17

                                      ---------------->                                  
                                      G  D  Y  F  D  H  W  G  R  G  T  L  L  T  V  S  S  
                    Query_7142   274  GTGACTACTTTGACCACTGGGGCCGGGGAACCCTGCTCACCGTCTCCTCAG  324
D  88.9% (16/18)    IGHD3-22*01  18   ...------------------------------------------------  20
J  93.8% (45/48)    IGHJ4*02     1    ---...........T.........A..........G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_123102

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           349     2e-98
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTCCGGAG	GTGGGAGCTACT	CGTGGTCCTTTTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCGGAGGTGGGAGCTACTCGTGGTCCTTTTCCTAC	ARGSGGGSYSWSFSY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7143   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGCTTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-21*01  47   .............................................G.......A...A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  S  S  S  S  Y  M  N  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  A  
                    Query_7143   91   AGTGGGTCTCATCCATTACTAGTAGTAGTAGTTACATGAACTACGCAGACTCAGTGAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (236/249)  IGHV3-21*01  137  ..................G..................AT..........................T........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  S  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  G  S  G  G  G  S  Y  
                    Query_7143   181  AGAGCTCCCTGTTTCTGCAAATGAACAGCCTGAGGGCCGAGGACACGGCTGTCTATTTCTGTGCGAGAGGGTCCGGAGGTGGGAGCTACT  270
V  94.8% (236/249)  IGHV3-21*01  227  ...A...A....A.....................A.................G....A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD1-26*01  7    ------------------------------------------------------------------------------............  18

                                      ---------------->                                  
                                      S  W  S  F  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7143   271  CGTGGTCCTTTTCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (38/38)   IGHJ4*02     11   -------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_123103

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         293     2e-81
IGHD3-9*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTGCAGATCACC	ATATTTTGACTGGTTA	CTTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCTGCAGATCACCATATTTTGACTGGTTACTTTACTAC	ASCRSPYFDWLLYY	232	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	10	1	0	90.9
CDR1-IMGT	19	42	24	21	3	0	87.5
FR2-IMGT	43	93	51	48	3	0	94.1
CDR2-IMGT	94	117	24	18	6	0	75
FR3-IMGT	118	231	114	106	8	0	93
CDR3-IMGT (germline)	232	236	5	5	0	0	100
Total	N/A	N/A	229	208	21	0	90.8


Alignments

                                        <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                           A  V  S  G  F  S  F  S  S  S  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  I  I  
                    Query_7144     8    GTGCAGTCTCTGGATTCTCCTTCAGCAGCTCTGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGGAGTGGGTGGCAATCATTT  97
V  90.8% (208/229)  IGHV3-30-3*01  65   ......C..........A.......T....A....................................G...............G.T..A.  154
                                           A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                        ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                        S  H  D  G  N  E  K  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  N  N  T  L  Y  V  
                    Query_7144     98   CACATGATGGAAACGAAAAGTACTACGCAGATTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCAACAATACGCTGTATGTGC  187
V  90.8% (208/229)  IGHV3-30-3*01  155  ..T.........G.A.T..A...........C.......A.................................G..C.........C...  244
                                        S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                        -------------------------------------------><----------------CDR3-IMGT--------------->    
                                        Q  M  N  S  L  R  A  E  D  T  A  V  Y  L  C  A  S  C  R  S  P  Y  F  D  W  L  L  Y  Y  W  
                    Query_7144     188  AAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTACCTCTGTGCGAGCTGCAGATCACCATATTTTGACTGGTTACTTTACTACTGGG  277
V  90.8% (208/229)  IGHV3-30-3*01  245  .....................................TTA.........-----------------------------------------  293
                                        Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (16/16)   IGHD3-9*01     9    -------------------------------------------------------------................-------------  24
J  97.4% (38/39)    IGHJ4*02       10   ---------------------------------------------------------------------------------.........  18

                                                                      
                                        G  Q  G  I  L  V  T  V  S  S  
                    Query_7144     278  GCCAGGGAATCCTGGTCACCGTCTCCTCAG  307
J  97.4% (38/39)    IGHJ4*02       19   .........C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_123101

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           330     1e-92
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  A  L  E 
                    Query_7145   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGCACTGGAG  90
V  93.1% (228/245)  IGHV4-59*08  49   ...........................................G......................................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  F  Y  T  G  T  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7145   91   TGGATCGGGTCTATCTTTTACACTGGGACCACCAACTACGACCCCTCTCTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGAAC  180
V  93.1% (228/245)  IGHV4-59*08  139  .....T....A.....A.....G.....G..........A.......C....................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  V  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  H  R  A  A  A  G  P 
                    Query_7145   181  CAGTTCTCCCTGAGAGTGACCTCTCTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATCCCCATAGAGCAGCAGCTGGCCCC  270
V  93.1% (228/245)  IGHV4-59*08  229  .............AGC...G....G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD6-13*01  7    --------------------------------------------------------------------------............----  18
J  93.2% (41/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_7145   271  TTTGACAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  313
J  93.2% (41/44)    IGHJ4*02     6    ......T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_123106

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           364     5e-103
IGHD2-2*01                                                                                            23.8    0.011 
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GAGGGAGTGCG	GTAGTATCAGCTGCT	TTCGGGGT	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGAGGGAGTGCGGTAGTATCAGCTGCTTTCGGGGTCAACTGGTTCGACCCC	AKGGSAVVSAAFGVNWFDP	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  P  G  F  T  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7146   1    GGTCCCTGAGACTCTCCTGTGCAGCCCCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-23*01  47   ..........................T..............................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  A  A  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7146   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGCTGCCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCG  180
V  96.8% (241/249)  IGHV3-23*01  137  ..............................G.AG.......................................................A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      E  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  G  S  A  V  V  S  
                    Query_7146   181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCCGTATATTACTGTGCGAAAGGAGGGAGTGCGGTAGTATCAG  270
V  96.8% (241/249)  IGHV3-23*01  227  ..............C.........................G............................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (14/15)    IGHD2-2*01   12   --------------------------------------------------------------------------------......C...  21

                                      -IMGT----------------------->                                  
                                      A  A  F  G  V  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7146   271  CTGCTTTCGGGGTCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  93.3% (14/15)    IGHD2-2*01   22   .....----------------------------------------------------------  26
J  100.0% (50/50)   IGHJ5*02     2    -------------..................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_127646

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           375     3e-106
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAGACTACTTTGACTAC	ARAIVVLTADYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_7147   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.0% (245/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_7147   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.0% (245/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_7147   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGTCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.0% (245/250)  IGHV4-31*03  229  .....................................C................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7147   271  GACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_121012

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           304     9e-85
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	219	25	0	89.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7148   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  89.8% (219/244)  IGHV4-59*01  49   ......................................C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  R  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_7148   91   TGGATTGGCCGTCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  89.8% (219/244)  IGHV4-59*01  139  ........GTA.A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P 
                    Query_7148   181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC  270
V  89.8% (219/244)  IGHV4-59*01  229  ...........G...C....C...........T............G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  95.7% (44/46)    IGHJ5*02     6    ------------------------------------------------------------------------------............  17

                                                                        
                                       W  G  Q  G  A  L  V  S  V  S  S  
                    Query_7148   271  TGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  304
J  95.7% (44/46)    IGHJ5*02     18   ............A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_123108

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GATAG	N/A	N/A	GTGCGGGATGGCAACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGATAGGTGCGGGATGGCAACCTGACTAC	VIGAGWQPDY	261	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	19	5	0	79.2
FR2-IMGT	75	125	51	43	8	0	84.3
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	106	8	0	93
CDR3-IMGT (germline)	261	267	7	5	2	0	71.4
Total	N/A	N/A	267	239	28	0	89.5


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  L  S  G  Y  Y  L  N  W  I  R  
                    Query_7149   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTGAGTGGTTATTATTTGAACTGGATCCGAC  90
V  89.5% (239/267)  IGHV4-59*01  26   ................T..........................................A.C...A....C..C.G..G.........G.  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  L  G  L  I  S  Y  T  G  S  T  N  Y  N  P  S  L  Q  S  R  V  I  
                    Query_7149   91   AGCCCCCAGGGAAGGGACTGGAATGGCTTGGTTTAATCTCTTACACCGGGAGTACCAACTACAACCCCTCCCTCCAGAGTCGAGTCATCA  180
V  89.5% (239/267)  IGHV4-59*01  116  ......................G...A....G.AT....A.....GT.....C.....................A............C..  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  V  I  G  
                    Query_7149   181  TATCGGTAGACACGTCCAAGAACCAGTTCTCCCTGAGGTTGAGCTCTGTGACCGCTGCGGACACGGCCCTATATTATTGTGTGATAGGTG  270
V  89.5% (239/267)  IGHV4-59*01  206  ....A...............................A.C.............................G.G.....C....C..G..---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -CDR3-IMGT--------->                                  
                                      A  G  W  Q  P  D  Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_7149   271  CGGGATGGCAACCTGACTACTGGGGCCCGGGAACGCTGGTCACCGTCTCCTCAG  324
J  95.1% (39/41)    IGHJ4*02     8    -------------..............A......C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_123109

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           355     3e-100
IGHD5-12*01                                                                                           23.8    0.011 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCTGCTATCGGATACTTT	GTGGCTACGATT	CGGGTGAGGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTGCTATCGGATACTTTGTGGCTACGATTCGGGTGAGGGCATGGACGTC	ARLCYRILCGYDSGEGMDV	246	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	112	2	0	98.2
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  I  R  S  T  N  F  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_7150   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCATCAGGAGTACTAATTTCTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  95.6% (238/249)  IGHV4-39*01  50   .....TCC...A..................G.........C....G..G..A......................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_7150   94   TGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCA  183
V  95.6% (238/249)  IGHV4-39*01  140  ..........................................................................................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  D  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  C  Y  R  I  L  C  
                    Query_7150   184  AGGACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACTCTGCTATCGGATACTTTGTG  273
V  95.6% (238/249)  IGHV4-39*01  230  ..A.....................G............................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD5-12*01  10   ---------------------------------------------------------------------------------------...  12

                                      -IMGT----------------------->                                 
                                      G  Y  D  S  G  E  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7150   274  GCTACGATTCGGGTGAGGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  100.0% (12/12)   IGHD5-12*01  13   .........-----------------------------------------------------  21
J  100.0% (42/42)   IGHJ6*02     21   --------------------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_47064

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           308     4e-86
IGHD2-21*02                                                                                           10.3    118  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGTCCCGACTGAACTACGGCATGGACGTC	ARLMSRLNYGMDV	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	220	23	0	90.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  V  S  I  S  N  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E  
                    Query_7151   4    CCCTGAGACTCTCCTGCTCTGTCTCTGGTGTCTCCATCAGCAATTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAAT  93
V  90.5% (220/243)  IGHV4-59*08  50   .....TCC...A.....A............G.........T.G................A............................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  E  Y  I  Y  Y  R  G  S  P  N  N  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_7151   94   GGATTGAGTACATCTATTACAGGGGGAGTCCCAATAACGACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAACC  183
V  90.5% (220/243)  IGHV4-59*08  140  ......G...T...........T.....CA....CT..A..................................A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M  
                    Query_7151   184  AGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTAATGTCCCGACTGAACTACGGCATGG  273
V  90.5% (220/243)  IGHV4-59*08  230  ............A.C...G...........................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (5/5)     IGHD2-21*02  17   ------------------------------------------------------------------------.....-------------  21
J  96.0% (48/50)    IGHJ6*02     13   ------------------------------------------------------------------------------.......T....  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7151   274  ACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  311
J  96.0% (48/50)    IGHJ6*02     25   ..................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_11845

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           399     3e-113
IGHD7-27*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGTCCTTTTA	CTAACTGGGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGTCCTTTTACTAACTGGGGTTGACTTT	AVLLLTGVDF	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	270	15	0	94.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  N  Y
                    Query_7152   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACAGCTTTACCAACTA  90
V  94.7% (270/285)  IGHV5-51*03  6    .............................................................A........................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  G  W  V  R  Q  R  P  G  E  G  L  E  W  M  G  L  I  Y  P  G  D  S  D  T  R  Y  N  S
                    Query_7152   91   CTTCATCGGCTGGGTGCGCCAGAGGCCCGGGGAAGGCCTGGAGTGGATGGGGCTCATTTATCCTGGTGACTCTGATACCAGGTACAACTC  180
V  94.7% (270/285)  IGHV5-51*03  96   ..GG...................T.......A....................A....C.......................A....G.C.  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7152   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.7% (270/285)  IGHV5-51*03  186  ...............G............................G..........C..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        I  Y  Y  C  A  V  L  L  L  T  G  V  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7152   271  CATTTATTACTGTGCAGTCCTTTTACTAACTGGGGTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  347
V  94.7% (270/285)  IGHV5-51*03  276  ...G...........--------------------------------------------------------------  290
                                        M  Y  Y  C  A                                                              
D  100.0% (10/10)   IGHD7-27*01  1    -------------------------..........------------------------------------------  10
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_215532

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAC	TATTACTATCGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTATTACTATCGTTCGGGGAGTTATTTTGACTAC	ARGHYYYRSGSYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  I  V  S  G  G  A  I  S  S  G  G  Y  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_7153   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCGCCATCAGCAGTGGTGGTTACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ...................C.............T...........................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_7153   91   CTGGAGTGGATTGGGCACATCTATTACAGTGGGACTACCTACTACAACCCGTCCCTCAAGAGTCGAATTACCATATCAGTAGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ...............T..................GC..............................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  A  Y  F  C  A  R  G  H  Y  Y  Y  R  S 
                    Query_7153   181  AAGAATCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGCGTATTTCTGTGCGAGAGGCCACTATTACTATCGTTCG  270
V  96.0% (240/250)  IGHV4-31*03  229  .....C..............................................T.....A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.8% (23/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------.........G.....  16

                                      ----------------->                                  
                                       G  S  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7153   271  GGGAGTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  95.8% (23/24)    IGHD3-10*01  17   .........-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    ---------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_235391

Length=416
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           372     3e-105
IGHD4-17*01                                                                                           23.8    0.013 
IGHJ6*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GGTCATC	GACTGCGGTGACTAC	GTCG	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGAGGTCATCGACTGCGGTGACTACGTCGACTGCTACTATTACGGAATGGGCGTC	ATEVIDCGDYVDCYYYGMGV	298	357	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	65	6	0	91.5
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	183	30	25	5	0	83.3
FR3-IMGT	184	297	114	104	10	0	91.2
CDR3-IMGT (germline)	298	305	8	7	1	0	87.5
Total	N/A	N/A	298	268	30	0	89.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  G  G  L  V  K  P  G  E  S  L  R  V  S  C  A  A  S  G  L  S  F  K  N  
                    Query_7154   8    TGCAGCTGGTGCAGTCTGGGGGAGGCTTGGTTAAGCCTGGAGAGTCCCTCAGAGTCTCCTGTGCAGCCTCTGGACTCAGCTTCAAAAACG  97
V  89.9% (268/298)  IGHV3-15*01  5    ...........G...................A........G.G......T...C....................T...CT....GT....  94
                                         Q  L  V  E  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  

                                      ----><--------------------FR2-IMGT---------------------><----------CDR2-IMGT---------><---
                                      A  W  M  T  W  V  R  Q  S  P  G  K  G  L  E  W  V  G  R  I  R  S  R  T  D  G  G  T  A  D  
                    Query_7154   98   CCTGGATGACCTGGGTCCGCCAGTCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGCATTAGAAGCAGAACCGATGGTGGGACGGCAGACT  187
V  89.9% (268/298)  IGHV3-15*01  95   .........G.............G...............................T....A.....A...T...........AA......  184
                                      A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  

                                      -------------------------------------------------FR3-IMGT---------------------------------
                                      Y  A  A  P  V  K  G  R  F  I  I  S  R  D  E  S  K  T  T  L  Y  L  Q  M  N  S  L  K  T  E  
                    Query_7154   188  ACGCGGCACCCGTGAAAGGCAGATTCATCATCTCAAGAGATGAATCGAAGACCACCCTTTATCTTCAAATGAACAGCCTGAAAACCGAGG  277
V  89.9% (268/298)  IGHV3-15*01  185  ....T......................C...............T..A..A.A...G..G.....G.........................  274
                                      Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  

                                      -------------------><-------------------------CDR3-IMGT------------------------>          
                                      D  T  A  V  Y  Y  C  A  T  E  V  I  D  C  G  D  Y  V  D  C  Y  Y  Y  G  M  G  V  W  G  Q  
                    Query_7154   278  ACACAGCCGTCTATTACTGTGCCACAGAGGTCATCGACTGCGGTGACTACGTCGACTGCTACTATTACGGAATGGGCGTCTGGGGCCAAG  367
V  89.9% (268/298)  IGHV3-15*01  275  ..........G.........A.......--------------------------------------------------------------  302
                                      D  T  A  V  Y  Y  C  T  T                                                                 
D  93.3% (14/15)    IGHD4-17*01  2    -----------------------------------....A..........----------------------------------------  16
J  86.4% (51/59)    IGHJ6*02     4    ------------------------------------------------------...A......C.....T....A..............  39

                                                             
                                      G  C  S  V  T  V  S  S 
                    Query_7154   368  GGTGTTCGGTCACCGTCTCCTCA  390
J  86.4% (51/59)    IGHJ6*02     40   ..ACCA.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40814496


Query= Query_235393

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_7155   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.9% (229/244)  IGHV4-59*01  49   .......................................AG....T..............A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7155   91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.9% (229/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_7155   181  CAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.9% (229/244)  IGHV4-59*01  229  ...................G...........................G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_7155   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_235392

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           396     2e-112
IGHD2-15*01                                                                                           10.3    132   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CGAGAAG	GGTGG	CGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGACACGAGAAGGGTGGCGGGGCGAACGACTAC	VRHEKGGGANDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	6	2	0	75
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P  N  Y
                    Query_7156   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCCAATTA  90
V  93.5% (272/291)  IGHV5-51*01  6    ....................................C........................................GC...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  G  M  G  N  I  Y  P  A  D  S  D  T  R  Y  S  L
                    Query_7156   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGGGGATGGGGAACATCTATCCTGCTGACTCTGACACCAGATACAGTCT  180
V  93.5% (272/291)  IGHV5-51*01  96   ...........................................T.........T...........G.........T...........C.C  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7156   181  GACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACACCGC  270
V  93.5% (272/291)  IGHV5-51*01  186  .T.....C.............................................................C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7156   271  CGTGTATTATTGTGTCAGACACGAGAAGGGTGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  351
V  93.5% (272/291)  IGHV5-51*01  276  .A.......C....CG.....------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                               
D  100.0% (5/5)     IGHD2-15*01  14   ----------------------------.....------------------------------------------------  18
J  97.4% (37/38)    IGHJ4*02     9    -------------------------------------------....................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_235395

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           330     1e-92
IGHD2-15*01                                                                                           12.2    32   
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTTCGAAGATGCGAAGTCGGCG	GGATAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTTCGAAGATGCGAAGTCGGCGGGATATTACTTTGACTCC	ARGFEDAKSAGYYFDS	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  T  S  G  N  Y  Y  W  S  W  V  R  Q  H  P  G  K  G  
                    Query_7157   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCACCAGTGGTAATTACTACTGGAGTTGGGTCCGCCAGCACCCAGGGAAGGGCC  93
V  92.4% (230/249)  IGHV4-31*01  50   .....TCC...A...........................G.......GG............C...A........................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  T  P  S  L  Q  S  L  V  S  I  S  V  D  T  S  
                    Query_7157   94   TGGAGTGGATTGGGTACATCTATCACAGTGGAAGCACCTACTACACCCCGTCCCTCCAGAGTCTAGTTTCCATATCAGTAGACACGTCTA  183
V  92.4% (230/249)  IGHV4-31*01  140  .......................T.......G.............A..........A...........A.....................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  K  L  K  S  V  T  A  S  D  T  A  V  Y  Y  C  A  R  G  F  E  D  A  K  S  
                    Query_7157   184  AGAATCAGTTCTCCCTGAAGCTGAAGTCTGTGACTGCCTCGGACACGGCCGTCTATTACTGTGCGAGAGGTTTCGAAGATGCGAAGTCGG  273
V  92.4% (230/249)  IGHV4-31*01  230  ....C...................GC............G.............G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       

                                      T------------------>                                  
                                      A  G  Y  Y  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_7157   274  CGGGATATTACTTTGACTCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  327
D  100.0% (6/6)     IGHD2-15*01  2    --......----------------------------------------------  7
J  95.7% (44/46)    IGHJ4*02     3    --------..........A..............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_235394

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           304     1e-84
IGHD5-18*01                                                                                           18.0    0.60 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	219	25	0	89.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_7158   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  89.8% (219/244)  IGHV4-59*01  50   .....TCC...A..................G........G.AGT.A......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S  
                    Query_7158   94   GGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGCC  183
V  89.8% (219/244)  IGHV4-59*01  140  .......G......T..........G.GC.............................A.T.A....A...................A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F  
                    Query_7158   184  AGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTTG  273
V  89.8% (219/244)  IGHV4-59*01  230  .............G.....C..................A.......G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------------------------.......C.G..A..  15

                                      ------------------->                                  
                                      G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7158   274  GTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  83.3% (15/18)    IGHD5-18*01  16   ...---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    -----.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_235397

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            353     1e-99
IGHD2-2*01                                                                                            14.1    9.8  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGAGCCCCAA	TAGTCCCAGC	GCTGATATACAGACC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGAGCCCCAATAGTCCCAGCGCTGATATACAGACCCAACTGGTTCGCCCCC	ARERAPIVPALIYRPNWFAP	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	15	9	0	62.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	258	32	0	89


Alignments

                                     <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                      Q  L  V  Q  S  G  A  E  V  K  K  S  G  A  S  V  K  V  S  C  K  A  S  G  Y  R  F  D  S  H 
                    Query_7159  2    CAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGTCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGCTACAGGTTCGATAGTCAT  91
V  89.0% (258/290)  IGHV1-3*01  7    .....T...........................C.....................................A....CC...AC...CT..  96
                                      Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                     --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                      G  I  H  W  L  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  V  A  D  G  Y  T  R  Y  S  R 
                    Query_7159  92   GGCATCCATTGGCTGCGCCAGGCCCCCGGACAAGGGCTTGAGTGGATGGGCTGGATCAACGTTGCCGATGGTTACACGAGATATTCACGG  181
V  89.0% (258/290)  IGHV1-3*01  97   .CT..G......G....................A................A..........C..G.A.....A....A.A........A.  186
                                      A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                     -----------------------------------------FR3-IMGT-----------------------------------------
                                      R  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  F  V  E  L  R  S  L  R  S  E  D  T  A 
                    Query_7159  182  AGGTTCCAAGGGAGAGTCACCATTACCAGAGACACATCCGCGAGCACAGCTTTCGTGGAACTGAGGAGCCTGAGATCTGAAGACACGGCT  271
V  89.0% (258/290)  IGHV1-3*01  187  .A......G..C.................G....................C.A.A....G.....C........................  276
                                      K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                     -----------><-------------------------CDR3-IMGT------------------------>                  
                                      V  Y  Y  C  A  R  E  R  A  P  I  V  P  A  L  I  Y  R  P  N  W  F  A  P  W  G  Q  G  T  L 
                    Query_7159  272  GTCTATTACTGTGCGAGAGAAAGAGCCCCAATAGTCCCAGCGCTGATATACAGACCCAACTGGTTCGCCCCCTGGGGCCAGGGAACCCTG  361
V  89.0% (258/290)  IGHV1-3*01  277  ..G.................----------------------------------------------------------------------  296
                                      V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD2-2*01  13   -------------------------------....A.....-------------------------------------------------  22
J  97.9% (47/48)    IGHJ5*02    2    --------------------------------------------------------...........A......................  35

                                                   
                                      V  T  V  S  S
                    Query_7159  362  GTCACCGTCTCCTC  375
J  97.9% (47/48)    IGHJ5*02    36   ..............  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_235396

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD3-16*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  A  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E  
                    Query_7160   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAGT  93
V  91.4% (222/243)  IGHV4-59*01  50   .....TCC...A..........................AG..G.T..................................G..........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N  
                    Query_7160   94   GGATTGGATATATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAACC  183
V  91.4% (222/243)  IGHV4-59*01  140  .......G...................G.....A............................A...............C......G....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------CDR3-IMGT--------->    
                                      R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W  
                    Query_7160   184  GCTTCTCCCTGAAGGTGAGCTCCGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGGG  273
V  91.4% (222/243)  IGHV4-59*01  230  AG............C.......T.......................G.....C..........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (7/7)     IGHD3-16*01  3    ------------------------------------------------------------------.......-----------------  9
J  100.0% (35/35)   IGHJ4*02     14   -------------------------------------------------------------------------------------.....  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_7160   274  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (35/35)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_235399

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           341     5e-96
IGHD2-8*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGCGGGGGGTTTATCATGA	TAATGGTG	GCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGCGGGGGGTTTATCATGATAATGGTGGCCTTGACTTC	ARRRGVYHDNGGLDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  Y  Y  W  N  W  I  R  Q  T  P  G  K  G  P  E 
                    Query_7161   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTACTACTGGAACTGGATCCGACAGACCCCAGGGAAGGGACCTGAG  90
V  94.7% (231/244)  IGHV4-59*08  49   .......................................A...............G.........G...C...............TG...  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  R  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7161   91   TGGATTGGGTATATCTATTCCAGGGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAAC  180
V  94.7% (231/244)  IGHV4-59*08  139  ...................A...T..................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  N  L  L  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  R  G  V  Y  H  D  N  G 
                    Query_7161   181  CAGTTCTCCCTGAACCTGCTCTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGAGACGGCGGGGGGTTTATCATGATAATGGT  270
V  94.7% (231/244)  IGHV4-59*08  229  ..............G...AG.................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD2-8*01   13   -----------------------------------------------------------------------------------.......  19

                                      ----------->                                  
                                       G  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7161   271  GGCCTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTTTCCTCAG  316
D  100.0% (8/8)     IGHD2-8*01   20   .---------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    ----......A...........................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_235398

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7162   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_7162   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_7162   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7162   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_89642

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           352     3e-99
IGHD6-13*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CACG	AGCAGCTGG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACACGAGCAGCTGGATTGACTAC	ARDTSSWIDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	235	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7163   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (235/245)  IGHV4-59*01  49   ...............................G...........G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  T  G  S  T  N  Y  N  P  S  L  K  S  Q  S  T  I  S  V  D  T  S  K  N 
                    Query_7163   91   TGGATTGGGTATATCTTTTACACTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCAATCCACCATATCAGTAGACACGTCGAAGAAC  180
V  95.9% (235/245)  IGHV4-59*01  139  ................A.....G...................................G.GT.....................C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  S  S  W  I  D  Y  W 
                    Query_7163   181  CAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACACGAGCAGCTGGATTGACTACTGG  270
V  95.9% (235/245)  IGHV4-59*01  229  ...............C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-13*01  10   ---------------------------------------------------------------------.........------------  18
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------...........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_7163   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (42/42)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_11846

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD5-18*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	113	1	0	99.1
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	242	233	9	0	96.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_7164   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAAT  93
V  96.3% (233/242)  IGHV4-59*01  50   .....TCC...A.........................................................................G..G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_7164   94   GGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  96.3% (233/242)  IGHV4-59*01  140  ........T.................................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  S  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y  
                    Query_7164   184  AGTTCTCCCTGAAGCTGAGCTCTGTGGCCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTACT  273
V  96.3% (233/242)  IGHV4-59*01  230  ..........................A...............................G...----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  90.0% (18/20)    IGHD5-18*01  1    ---------------------------------------------------------------..........C.....T...-------  20
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7164   274  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_109343

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           297     7e-83
IGHD6-13*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGGA	CAACGC	GGGTATAGCAGCACCTGG	AGCGTTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAGGACAACGCGGGTATAGCAGCACCTGGAGCGTTTTTTGACTAC	AEDNAGIAAPGAFFDY	237	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	103	11	0	90.4
CDR3-IMGT (germline)	237	244	8	6	2	0	75
Total	N/A	N/A	232	211	21	0	90.9


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  N  L  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  T  I  
                    Query_7165   13   GTGCAGCCTCTGGATTCACCTTTAACCTCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCGCAACTATTA  102
V  90.9% (211/232)  IGHV3-23*01  65   ........................G.AG...........G........................................T..G......  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  V  S  G  R  S  T  H  Y  A  D  Y  L  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_7165   103  GTGTTAGTGGTCGTAGCACACACTACGCAGACTATCTGAAGGGCCGGTTCACCATCTCCAGGGACAATTCCAAGAACACACTGTATCTGC  192
V  90.9% (211/232)  IGHV3-23*01  155  ...G.......G........T............CCG.........................A.................G..........  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  D  S  L  R  A  E  D  T  A  V  Y  F  C  A  E  D  N  A  G  I  A  A  P  G  A  F  F  D  
                    Query_7165   193  AGATGGACAGCCTGCGAGCCGAAGACACGGCCGTATATTTCTGTGCGGAGGACAACGCGGGTATAGCAGCACCTGGAGCGTTTTTTGACT  282
V  90.9% (211/232)  IGHV3-23*01  245  .A...A........A.......G................A.......A.A..--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  94.4% (17/18)    IGHD6-13*01  1    ----------------------------------------------------------.............G....--------------  18
J  100.0% (41/41)   IGHJ4*02     6    -----------------------------------------------------------------------------------.......  12

                                      ->                                
                                      Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7165   283  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  316
J  100.0% (41/41)   IGHJ4*02     13   ..................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_89640

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_7166   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7166   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_7166   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7166   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_147366

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*03                                                                                           305     3e-85
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	GGGG	GCACTGGCTGG	CTGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGGGGCACTGGCTGGCTGAATGACTTC	AGGTGWLNDF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	220	25	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  T  S  R  F  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7167   1    GGTCCCTGAGACTCTCCTGTGCAGTGTCTGGGTTCACCACCAGTCGTTTCTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGTCTGG  90
V  89.8% (220/245)  IGHV3-74*03  47   ........................CC.....A......TT....A.C.A....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  L  I  L  S  D  G  S  D  A  T  Y  A  D  S  V  K  G  R  F  T  I  S  I  D  N  A  
                    Query_7167   91   TGTGGGTCTCACTTATTCTGAGTGATGGGAGTGACGCAACGTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCATCGACAACGCCA  180
V  89.8% (220/245)  IGHV3-74*03  137  ............G....AAT............AG.A..........................................GA..........  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  V  F  L  Q  M  D  S  L  R  D  E  D  T  A  V  Y  Y  C  A  G  G  T  G  W  L  N  D  
                    Query_7167   181  AGAACACGGTCTTTCTGCAAATGGACAGTCTGAGAGACGAGGACACGGCTGTTTATTATTGTGCAGGGGGCACTGGCTGGCTGAATGACT  270
V  89.8% (220/245)  IGHV3-74*03  227  ........C.G.A..........A............C...............G.....C......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.9% (10/11)    IGHD6-19*01  8    ---------------------------------------------------------------------...G.......----------  18
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7167   271  TCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_51826

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           353     9e-100
IGHD3-22*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTTTG	ACTATGATAGTAGTGGT	ACTTACCACGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTTGACTATGATAGTAGTGGTACTTACCACGTTTTTGACTAC	ARFDYDSSGTYHVFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	234	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7168   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (234/242)  IGHV4-59*01  49   ..............................................A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  N 
                    Query_7168   91   TGGATTGGATATATCTATTACAGTGGCAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCCAGGAAC  180
V  96.7% (234/242)  IGHV4-59*01  139  ........G.................G..C..........................................G............A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  R  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  F  D  Y  D  S  S  G  T  Y 
                    Query_7168   181  CAGTTCTCCCTGAAGCTGAGGTCTATGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTTTGACTATGATAGTAGTGGTACTTAC  270
V  96.7% (234/242)  IGHV4-59*01  229  ....................C...G.....................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (17/17)   IGHD3-22*01  6    -------------------------------------------------------------------.................------  22

                                      -------------->                                  
                                       H  V  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7168   271  CACGTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_21644

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_7169   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG..G.T..................................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_7169   91   TGGATTGGATATATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  93.4% (228/244)  IGHV4-59*01  139  ........G...................G.....A............................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W 
                    Query_7169   181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  97.1% (34/35)    IGHJ4*02     14   --------------------------------------------------------------------------------------....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_7169   271  GGCCAGGGAACCCTGGTCACCGTCTCTTCAG  301
J  97.1% (34/35)    IGHJ4*02     18   ..........................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_281059

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_7170   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_7170   91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_7170   181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_7170   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_281058

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_7171   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_7171   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_7171   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_7171   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_2875

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  F  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_7172   1    GCAGCTGGTGCAGTTTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ..............C..............A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_7172   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  R  K  A  S  D  T  A
                    Query_7172   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCGGAAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .......C.....................................C...........G......A......T..................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_7172   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_7172   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_2873

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD2-15*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGT	GGATATTGTAGTGG	CTTTGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTGGATATTGTAGTGGCTTTGGTTGACTCC	AKDVDIVVALVDS	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7173   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAATTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-23*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  L  T  T  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  Q  S  
                    Query_7173   91   AGTGGGTCTCAGGTATTAGTGGTAGTGGTCTTACCACATACTACGCAGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACCAATCCA  180
V  94.8% (237/250)  IGHV3-23*01  137  ............C................GG..G......................A.......G..................A.T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  V  D  I  V  V  A  
                    Query_7173   181  AGAACACCCTGTATCTGCAAATGAGCAGCCTGAGGGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATGTGGATATTGTAGTGGCTT  270
V  94.8% (237/250)  IGHV3-23*01  227  .......G................A.........A...................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (14/14)   IGHD2-15*01  2    -------------------------------------------------------------------------..............---  15

                                      ---------->                                  
                                      L  V  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7173   271  TGGTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ4*02     7    ---......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_2871

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           316     2e-88
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGG	CCGCCGGGTG	AGCAATGGCTGG	GGAGCTTACTTTAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGGCCGCCGGGTGAGCAATGGCTGGGGAGCTTACTTTAATTACGGGATGGACGGC	AGGRRVSNGWGAYFNYGMDG	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	44	7	0	86.3
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	7	1	0	87.5
Total	N/A	N/A	274	240	28	6	87.6


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  H  W  
                    Query_7174   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGCACTGGT  90
V  87.6% (240/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C......AG....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_7174   91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  87.6% (240/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_7174   181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGG  270
V  87.6% (240/274)  IGHV4-34*01  200  .......A...................................GC............C........................C......A  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      G  G  R  R  V  S  N  G  W  G  A  Y  F  N  Y  G  M  D  G  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_7174   271  GAGGCCGCCGGGTGAGCAATGGCTGGGGAGCTTACTTTAATTACGGGATGGACGGCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  87.6% (240/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_281051

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         346     2e-97
IGHD2-2*02                                                                                            35.3    4e-06
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	GGATATTGTAGTGGTATCAGGTGCTTTACC	GGGGTAG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGGATATTGTAGTGGTATCAGGTGCTTTACCGGGGTAGGGTTCGACCCC	AREGYCSGIRCFTGVGFDP	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	30	25	2	3	83.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	251	238	10	3	94.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  S  V  S  G  D  S  I  S  S  G     Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_7175     1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGCAGTGGG---TACTCCTGGAGCTGGATCCGGCAGCCACCGGGGAAGGGC  87
V  94.8% (238/251)  IGHV4-30-2*01  49   ..................G............G...............TGGT.............................A.........  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  R  S 
                    Query_7175     88   CTGGAGTGGATTGGGTACATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCATTAGACAGGTCC  177
V  94.8% (238/251)  IGHV4-30-2*01  139  ..........................................................................A...G...........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                         T  N  Q  V  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  Y  C  S  G  I 
                    Query_7175     178  ACGAACCAGGTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTACTGTGCCAGAGAGGGATATTGTAGTGGTATC  267
V  94.8% (238/251)  IGHV4-30-2*01  229  .A.......T................C.............................T..............-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.7% (26/30)    IGHD2-2*02     2    ------------------------------------------------------------------------............A...C.  19

                                        3-IMGT----------------------->                                  
                                         R  C  F  T  G  V  G  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7175     268  AGGTGCTTTACCGGGGTAGGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  86.7% (26/30)    IGHD2-2*02     20   ..C....A....----------------------------------------------------  31
J  100.0% (45/45)   IGHJ5*02       7    -------------------.............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_281052

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           294     6e-82
IGHD6-19*01                                                                                           12.2    31   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GGCTGG	AGGCAGCGC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCTGGAGGCAGCGCCTATTATTATGGTTTGGACGTC	ARAGGSAYYYGLDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	215	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  R  S  G  Y  W  S  W  T  R  Q  S  P  G  K  G  L  E 
                    Query_7176   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGAAGTGGCTACTGGAGCTGGACCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  88.8% (215/242)  IGHV4-59*08  49   ..................A......................T...TA..............T.......C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  Y  N  G  G  S  T  D  Y  N  P  S  L  R  S  R  V  T  I  S  A  D  T  S  K  K 
                    Query_7176   91   TGGATTGGATACTTCTATAATGGGGGGAGCACCGATTACAATCCCTCCCTCAGGAGTCGAGTCACCATCTCAGCAGACACGTCCAAGAAG  180
V  88.8% (215/242)  IGHV4-59*08  139  ........G..TA.....T.CA.T.........A.C.....C..........A...............A....T...............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  L  S  L  T  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  G  S  A  Y  Y  Y  G 
                    Query_7176   181  CAACTCTCCCTGACGGTGACCTCTGTGACCGCCGCAGACACGGCCGTTTACTACTGTGCGAGGGCTGGAGGCAGCGCCTATTATTATGGT  270
V  88.8% (215/242)  IGHV4-59*08  229  ..GT.........A.C...G...........................G..T...........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD6-19*01  13   --------------------------------------------------------------......----------------------  18
J  90.9% (50/55)    IGHJ6*02     8    -----------------------------------------------------------------------------...C..C..C...  20

                                      -------->                                 
                                       L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7176   271  TTGGACGTCTGGGGCCAAGGGACCACGGTCACTGTCTCCTCA  312
J  90.9% (50/55)    IGHJ6*02     21   A...............................C.........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_281055

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           333     1e-93
IGHD3-10*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTTGG	GGTTCGAGGAGTTAT	CAGGAAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGGGGTTCGAGGAGTTATCAGGAATCTACTACTACGGCATGGACGTC	ARLGFEELSGIYYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7177   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACTACCTATAGTATGAACTGGGTCCGGCAGGCTCCAGGTAAGGGCCTGG  90
V  93.1% (230/247)  IGHV3-21*01  47   ..........................................G..G......C..............C...........G.....G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  S  I  S  S  R  D  T  Y  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_7177   91   AGTGGCTCTCGTCCATTAGTAGTCGAGATACTTACATAAACTACGCAGACTCCGTAAAGGGCCGATTCACCATCTCCAGAGACAGCGCCA  180
V  93.1% (230/247)  IGHV3-21*01  137  .....G....A............A.TAG..G.......T.............A..G............................A.....  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  L  G  F  E  E  L  S  
                    Query_7177   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGTTGGGGTTCGAGGAGTTATCAG  270
V  93.1% (230/247)  IGHV3-21*01  227  ...................................................................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------------......G........---  25

                                      IMGT--------------------->                                 
                                      G  I  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7177   271  GAATCTACTACTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  98.2% (54/55)    IGHJ6*02     8    ----............T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_281057

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           375     3e-106
IGHD2-15*01                                                                                           14.1    8.7   
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	AGGATAT	CAATAGGGGAATTTGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGATATCAATAGGGGAATTTGGTACTACTACTACGGTATGGACGTC	ARDQDINRGIWYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  S  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7178   1    GGTCCCTGAGACTCTCCTGTGCATCCTCTGGGTTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (245/250)  IGHV3-48*03  47   .......................G.......A..........................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_7178   91   AGTGGGTTTCATATATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.0% (245/250)  IGHV3-48*03  137  .............C...........................................A................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Q  D  I  N  R  G  
                    Query_7178   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATCAGGATATCAATAGGGGAA  270
V  98.0% (245/250)  IGHV3-48*03  227  ............A.........................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-15*01  1    ------------------------------------------------------------------------.......-----------  7

                                      -IMGT----------------------->                                 
                                      I  W  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7178   271  TTTGGTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACTGTCTCCTCA  332
J  98.2% (56/57)    IGHJ6*02     6    -----...............................................C.........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_2879

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           307     1e-85
IGHD2-2*01                                                                                            21.8    0.041
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACAAACTGCTA	CTATCAA	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACAAACTGCTACTATCAAATGGACGTC	ARVDCSSTNCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	220	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  A  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  H  G  Q  G  L  E 
                    Query_7179   1    ACCCTGTCCCTCACCTGCACTGCCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCACGGGCAGGGACTGGAG  90
V  90.2% (220/244)  IGHV4-59*01  49   ......................T......T..........G.AG.T...........................CA...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  N  N 
                    Query_7179   91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAGTACAACCCCTCCCTCAAGGGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  90.2% (220/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C..................A....A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  N  C  Y 
                    Query_7179   181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACAAACTGCTAC  270
V  90.2% (220/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  85.0% (17/20)    IGHD2-2*01   8    ---------------------------------------------------------------------........T..C.G......-  27

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  R  G  T  K  V  I  V  S  S 
                    Query_7179   271  TATCAAATGGACGTCTGGGGCCGAGGGACCAAGGTCATCGTCTCCTCA  318
J  92.9% (39/42)    IGHJ6*02     21   ------................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_298894

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*02                                                                                            378     3e-107
IGHD1-26*01                                                                                           14.1    8.9   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*02	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	CAGCCTTGACGG	AGTGGGA	ACTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGACCAGCCTTGACGGAGTGGGAACTTTACTTTGACTAC	AHRPALTEWELYFDY	263	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	44	2	0	95.7
CDR1-IMGT	47	76	30	29	1	0	96.7
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	105	9	0	92.1
CDR3-IMGT (germline)	263	272	10	10	0	0	100
Total	N/A	N/A	272	257	15	0	94.5


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  R  T  S  G  V  G  V  G  W  V  R
                    Query_7180   1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACGTTCTCTGGGTTCTCACTCAGGACTAGTGGAGTGGGTGTGGGCTGGGTCCG  90
V  94.5% (257/272)  IGHV2-5*02   30   ...........................G...........C....................C........................A....  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  S  P  G  R  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  L  T
                    Query_7180   91   TCAGTCCCCAGGAAGGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGTTACAGCCCATCTCTGAAGAGCAGACTCAC  180
V  94.5% (257/272)  IGHV2-5*02   120  ....C.........A.............................................C.......................G.....  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  T  K  D  T  N  K  N  Q  V  I  L  K  M  T  N  M  E  P  V  D  T  A  T  Y  Y  C  A  H  R
                    Query_7180   181  CATCACCAAGGACACTAACAAAAACCAGGTGATCCTTAAAATGACCAACATGGAGCCTGTGGACACAGCCACATACTACTGTGCACACAG  270
V  94.5% (257/272)  IGHV2-5*02   210  ...............CTC.............G......C...............C....................T..............  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  R

                                      ----------CDR3-IMGT----------------->                                
                                        P  A  L  T  E  W  E  L  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7180   271  ACCAGCCTTGACGGAGTGGGAACTTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  339
V  94.5% (257/272)  IGHV2-5*02   300  ..-------------------------------------------------------------------  301
                                                                                                           
D  100.0% (7/7)     IGHD1-26*01  6    --------------.......------------------------------------------------  12
J  100.0% (44/44)   IGHJ4*02     3    -------------------------............................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_89649

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           449     3e-128
IGHJ5*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	N/A	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TCAGGGATCGCATCTAGGA	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGATCGCATCTAGGATGGTTCGACCCC	ARDQGSHLGWFDP	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	72	2	0	97.3
CDR1-IMGT	78	101	24	24	0	0	100
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	112	2	0	98.2
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	295	291	4	0	98.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  
                    Query_7181   4    AGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCA  93
V  98.6% (291/295)  IGHV1-69*12  2    .............G........G...................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  
                    Query_7181   94   GCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACG  183
V  98.6% (291/295)  IGHV1-69*12  92   ..........................................................................................  181
                                      S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  I  A  Y  M  E  L  S  S  L  R  S  E  D  
                    Query_7181   184  CACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCATAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACA  273
V  98.6% (291/295)  IGHV1-69*12  182  ...................................................C......................................  271
                                      A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  A  V  Y  Y  C  A  R  D  Q  G  S  H  L  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7181   274  CGGCCGTCTATTACTGTGCGAGAGATCAGGGATCGCATCTAGGATGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  363
V  98.6% (291/295)  IGHV1-69*12  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  V  Y  Y  C  A  R                                                                    
J  100.0% (46/46)   IGHJ5*02     6    --------------------------------------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_274648

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            325     3e-91
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGCAACGC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGCAACGCCTGGTACTCGGGGTTTTGACTAC	ARHLATPGTRGFDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  V  G  S  I  T  S  A  N  W  W  S  W  V  R  Q  P  P  G  R  G  L 
                    Query_7182   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGTTGGCTCCATCACCAGTGCTAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAGGGGGCTG  90
V  92.3% (227/246)  IGHV4-4*02   49   ............................G...........G....AG...C...............................A.......  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  F  L  G  G  R  T  N  Y  S  P  S  L  E  S  R  V  T  L  P  I  D  T  S  K 
                    Query_7182   91   GAGTGGATTGGGGAAATCTTTCTTGGTGGGAGGACCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCCTGCCAATAGACACGTCCAAG  180
V  92.3% (227/246)  IGHV4-4*02   139  ...................A..A.A.......C..........A..........A..............A.AT..G......A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  A  T  P  G  T  R 
                    Query_7182   181  AACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGAGACATCTAGCAACGCCTGGTACTCGG  270
V  92.3% (227/246)  IGHV4-4*02   229  ................A.................................G...............------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7182   271  GGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (43/43)   IGHJ4*02     6    ---...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_137745

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           350     8e-99
IGHD2-15*01                                                                                           25.7    0.003
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GCCG	GGATATTGTAGTG	ATAGCAAGTGT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGCCGGGATATTGTAGTGATAGCAAGTGTTACTATGGTATGGACCTC	AKEPGYCSDSKCYYGMDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  I  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7183   1    GGTCCCTGAGACTCTCCTGTATAGCCTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-30*18  47   ....................GC.......................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7183   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCAG  180
V  94.8% (237/250)  IGHV3-30*18  137  ..............................................A.........................................CA  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      E  S  T  L  Y  L  H  M  D  P  L  R  A  E  D  T  A  V  Y  Y  C  A  K  E  P  G  Y  C  S  D  
                    Query_7183   181  AGAGCACACTGTATCTGCATATGGACCCCTTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGAGCCGGGATATTGTAGTGATA  270
V  94.8% (237/250)  IGHV3-30*18  227  ...A...G...........A...A..AG.C........................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (13/13)   IGHD2-15*01  2    --------------------------------------------------------------------------.............---  14

                                      IMGT--------------------->                                 
                                      S  K  C  Y  Y  G  M  D  L  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_7183   271  GCAAGTGTTACTATGGTATGGACCTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  329
J  94.1% (48/51)    IGHJ6*02     12   --------.....C.........G........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_137744

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     4e-93
IGHD3-10*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGTTGG	GGTTCGAGGAGTTAT	CAGGAAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGGGGTTCGAGGAGTTATCAGGAATCTACTACTACGGCATGGACGTC	ARLGFEELSGIYYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	229	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  S  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  E  G  L  
                    Query_7184   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCAGCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGGAGGGGCTGG  90
V  93.1% (229/246)  IGHV3-23*01  47   ........................C...........C...........................................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  N  P  S  G  K  N  I  Y  N  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7184   91   AGTGGGTCTCAGCTATTAATCCTAGTGGTAAAAACATATACAACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (229/246)  IGHV3-23*01  137  ..................G.GG.......GGT.G..C....T................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  L  G  F  E  E  L  S  
                    Query_7184   181  AGAAGACACTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGTTGGGGTTCGAGGAGTTATCAG  270
V  93.1% (229/246)  IGHV3-23*01  227  ....C..G........G................................C..A.............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------------......G........---  25

                                      IMGT--------------------->                                 
                                      G  I  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7184   271  GAATCTACTACTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  98.2% (54/55)    IGHJ6*02     8    ----............T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_349803

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCGGCCGG	TTGTGGTAGTACCGGCTGCTATG	GAAAT	AACCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCGGCCGGTTGTGGTAGTACCGGCTGCTATGGAAATAACCGGTTCGACCCC	AREAAGCGSTGCYGNNRFDP	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_7185   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGCGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .............................................T...................................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  D  H  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7185   91   TGGATTGGGTATATCCATTACAGTGGGAGCACCGACCACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTTGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ...............T.................A..T...............................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  I  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  A  G  C  G  S  T  G 
                    Query_7185   181  CAGATCTCCCTGAAGGTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGAAGCGGCCGGTTGTGGTAGTACCGGC  270
V  95.1% (233/245)  IGHV4-59*01  229  ...T...........C...G...........................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.3% (21/23)    IGHD2-2*01   7    --------------------------------------------------------------------------....A........A..  22

                                      GT------------------------>                                  
                                       C  Y  G  N  N  R  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7185   271  TGCTATGGAAATAACCGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  91.3% (21/23)    IGHD2-2*01   23   .......------------------------------------------------------  29
J  98.0% (48/49)    IGHJ5*02     3    ------------...T.............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_137746

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           338     5e-95
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	230	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_7186   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.3% (230/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7186   91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCC  180
V  94.3% (230/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C.................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_7186   181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  94.3% (230/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7186   271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_11754

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           396     2e-112
IGHD3-22*01                                                                                           12.2    37    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACATTTCCTAAT	CTATGA	CAACAGAAATTACCGCCCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACATTTCCTAATCTATGACAACAGAAATTACCGCCCTCTTGACTAC	ARGHFLIYDNRNYRPLDY	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	271	18	0	93.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  R  Y 
                    Query_7187   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACAGCTTTTCCCGTTAT  91
V  93.8% (271/289)  IGHV1-18*01  7    .................................................................T..........C....A..A.C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  H 
                    Query_7187   92   GGTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCAGCGCTTACAACGGTAACACAAACTATGCACAT  181
V  93.8% (271/289)  IGHV1-18*01  97   ...A..............................................A.................T....................G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  E  D  R  V  T  M  T  T  D  T  S  T  T  T  A  Y  M  E  L  R  S  L  T  S  D  D  T  A 
                    Query_7187   182  AAATTCGAGGACAGAGTCACCATGACCACAGACACTTCCACGACCACAGCCTACATGGAACTGAGGAGCCTGACATCTGACGACACGGCC  271
V  93.8% (271/289)  IGHV1-18*01  187  ..GC..C...G........................A.......G...............G.............G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  G  H  F  L  I  Y  D  N  R  N  Y  R  P  L  D  Y  W  G  Q  G  T  L  L  T 
                    Query_7187   272  GTCTATTACTGTGCGAGAGGACATTTCCTAATCTATGACAACAGAAATTACCGCCCTCTTGACTACTGGGGCCAGGGAACCCTGCTCACC  361
V  93.8% (271/289)  IGHV1-18*01  277  ..G................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD3-22*01  7    --------------------------------......----------------------------------------------------  12
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------..........................G.....  38

                                                
                                       V  S  S  
                    Query_7187   362  GTCTCCTCAG  371
J  97.6% (41/42)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_137740

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD4-17*01                                                                                           14.1    8.5  
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGAATAC	AG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGAATACAGCAACTGGGTCGACCCC	ARDSGEYSNWVDP	250	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	135	27	19	2	6	70.4
FR3-IMGT	136	249	114	105	9	0	92.1
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	233	18	6	90.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  V  S  S  G  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_7188   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCGTCAGCAGTGGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGG  90
V  90.7% (233/257)  IGHV4-61*01  49   ...................C...........G.............................G...........................A  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  H  I  Y  N  Y  N  R  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D 
                    Query_7188   91   CTGGAGTGGATCGGTCATATCTATAACTATAACAGAGGGAGCACCAATTATAATCCCTCCCTCCAAAGTCGAGTCACCATATCAGTAGAC  180
V  90.7% (233/257)  IGHV4-61*01  139  ...........T..GT........T..------..T...........C..C..C.........A.G........................  222
                                       L  E  W  I  G  Y  I  Y  Y        S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------CDR3-I
                                       T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  G  E  Y 
                    Query_7188   181  ACATCCAAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATTCCGGTGAATAC  270
V  90.7% (233/257)  IGHV4-61*01  223  ..G........................C...G...........................G.................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  90.0% (9/10)     IGHD4-17*01  7    --------------------------------------------------------------------------------......C...  16

                                      MGT-------------->                                  
                                       S  N  W  V  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7188   271  AGCAACTGGGTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  98.0% (49/50)    IGHJ5*02     2    --.......T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_137743

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACAGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	268	18	0	93.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_7189   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  93.7% (268/286)  IGHV5-51*01  6    ..............................A...................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  Q  G  L  E  L  M  G  L  I  Y  P  G  D  S  D  T  W  Y  S  P
                    Query_7189   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCAAGGCCTGGAGTTGATGGGGCTCATCTATCCTGGTGACTCTGATACCTGGTACAGTCC  180
V  93.7% (268/286)  IGHV5-51*01  96   ......................A........A............G.......A..........................A.A.....C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  T  S  A  Y  L  Q  W  T  T  L  K  A  S  D  T  A
                    Query_7189   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCACCTCCGCCTACCTGCAGTGGACCACCCTGAAGGCCTCGGACACCGC  270
V  93.7% (268/286)  IGHV5-51*01  186  ....................C...................A...G.A..................G..G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7189   271  CATTTACTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACAGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  353
V  93.7% (268/286)  IGHV5-51*01  276  ...G..T.........-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------.................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_137742

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           352     3e-99
IGHD6-25*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAG	ATAGCAGCG	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCCAGATAGCAGCGCCCTTTGATTAC	TRGQIAAPFDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7190   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-33*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  S  D  G  N  N  K  Y  Y  A  A  S  V  K  G  R  F  T  I  S  R  N  N  S  
                    Query_7190   91   AGTGGGTGGCAGTTATTTGGTCTGATGGAAATAATAAATATTATGCAGCCTCCGTGAAGGGCCGATTCACCATCTCCAGAAACAACTCCA  180
V  95.2% (237/249)  IGHV3-33*01  137  ................A....A........G.........C.......A...............................G....T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  G  S  L  T  A  E  D  T  A  V  Y  Y  C  T  R  G  Q  I  A  A  P  F  
                    Query_7190   181  AGAACACGCTGTATCTGCAAATGGGCAGCCTGACAGCCGAGGACACGGCTGTGTATTACTGTACGAGAGGCCAGATAGCAGCGCCCTTTG  270
V  95.2% (237/249)  IGHV3-33*01  227  .......................AA........G............................G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-25*01  5    --------------------------------------------------------------------------.........-------  13
J  93.2% (41/44)    IGHJ4*02     5    -------------------------------------------------------------------------------------.....  9

                                      ---->                                  
                                      D  Y  L  G  Q  G  T  Q  V  T  V  S  S  
                    Query_7190   271  ATTACTTGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  309
J  93.2% (41/44)    IGHJ4*02     10   .C....G..............T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_11758

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            355     3e-100
IGHD3-16*01                                                                                           18.0    0.54  
IGHJ4*02                                                                                              62.2    6e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	GGGT	CGTTTGGGG	CG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGGGGTCGTTTGGGGCGC	SRGRLGR	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7191   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (237/247)  IGHV3-7*03   47   .........................................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  N  Q  D  G  S  E  A  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7191   91   AGTGGGTGGCCATCATAAACCAAGATGGAAGTGAGGCATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  96.0% (237/247)  IGHV3-7*03   137  ............A......G...............AA..........................................A..........  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  S  R  G  R  L  G  R  W  G  
                    Query_7191   181  AGAACTCTCTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTGTATTACTGTTCGAGGGGTCGTTTGGGGCGCTGGGGCC  270
V  96.0% (237/247)  IGHV3-7*03   227  .......A.........C................................G...........G....-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD3-16*01  13   -----------------------------------------------------------------------.........----------  21
J  97.1% (34/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  T  L  V  T  V  S  T  
                    Query_7191   271  AGGGAACCCTGGTCACCGTCTCCACAG  297
J  97.1% (34/35)    IGHJ4*02     22   .......................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_11759

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           325     2e-91
IGHD6-19*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAGGGAGT	AGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCC	ARAGSSGWLDS	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  D  Y  W  S  W  I  R  K  P  P  G  K  G  L  E 
                    Query_7192   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATAACTAGTGACTACTGGAGCTGGATCCGGAAGCCCCCTGGGAAGGGACTGGAG  90
V  92.6% (226/244)  IGHV4-59*01  49   .............................T........C.G....T....................C.......A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  D  Y  D  S  S  L  K  S  R  V  T  I  S  F  D  R  S  K  N 
                    Query_7192   91   TGGATTGGATATATCTATTACAGTGGGAGCACCGACTACGATTCCTCCCTCAAGAGTCGAGTCACCATATCATTTGACAGGTCCAAGAAC  180
V  92.6% (226/244)  IGHV4-59*01  139  ........G........................A.....A.CC.............................G.A....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  S  S  G  W  L  D  S 
                    Query_7192   181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCC  270
V  92.6% (226/244)  IGHV4-59*01  229  ...............C....C..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-19*01  10   ------------------------------------------------------------------------.........---------  18
J  97.5% (39/40)    IGHJ4*02     7    ----------------------------------------------------------------------------------......A.  14

                                                                      
                                       W  G  Q  G  T  L  V  T  V  S  S
                    Query_7192   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  302
J  97.5% (39/40)    IGHJ4*02     15   ................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_19505

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         366     2e-103
IGHD3-16*02                                                                                           25.7    0.003 
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGCAGCC	TGGGGGAATTATCGTT	C	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGCAGCCTGGGGGAATTATCGTTCCTTTGACTAC	ARAAWGNYRSFDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  D  G  S  I  S  G  G  G  F  Y  W  S  W  L  R  Q  P  P  G  K  G 
                    Query_7193     1    ACCCTGTCCCTCACCTGCACTGTCTCTGATGGCTCCATCAGCGGTGGTGGTTTCTACTGGAGTTGGCTCCGCCAGCCCCCAGGGAAGGGC  90
V  97.2% (241/248)  IGHV4-30-4*01  49   ............................G.............A......A..A.............A.......................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7193     91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  97.2% (241/248)  IGHV4-30-4*01  139  ..........................................................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  A  A  W  G  N  Y  R 
                    Query_7193     181  AAGAACCACTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTTCTGTGCCAGGGCAGCCTGGGGGAATTATCGT  270
V  97.2% (241/248)  IGHV4-30-4*01  229  ........G.................................................A.........----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  93.8% (15/16)    IGHD3-16*02    17   ---------------------------------------------------------------------------.......G.......  31

                                        ----------->                                  
                                         S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7193     271  TCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  93.8% (15/16)    IGHD3-16*02    32   .---------------------------------------------  32
J  100.0% (44/44)   IGHJ4*02       5    --............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_19504

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD3-16*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_7194   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (227/249)  IGHV4-61*01  49   .......................C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S 
                    Query_7194   91   CTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  91.2% (227/249)  IGHV4-61*01  139  ....A.........GT............G......CAC..A.........................G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y 
                    Query_7194   181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTAT  270
V  91.2% (227/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------------.....  28

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_7194   271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
D  100.0% (7/7)     IGHD3-16*02  29   ..--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_273930

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           416     2e-118
IGHD1-20*01                                                                                           29.5    2e-04 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD1-20*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGAAAA	TATAACTGGAACGAC	GGAAT	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATC	ARVGKYNWNDGIAFDI	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	71	3	0	95.9
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	109	5	0	95.6
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	294	280	14	0	95.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  K  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N  
                    Query_7195   5    AGGTCCAGCTGGTGCAGTCTGGAGCTAAGGTGAAGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAACA  94
V  95.2% (280/294)  IGHV1-69*12  2    ......................G...G...................C........................................G..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  F  A  V  N  W  V  R  Q  A  P  G  H  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  K  Y  
                    Query_7195   95   GCTTTGCTGTCAACTGGGTGCGACAGGCCCCTGGACATGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAACAAAATACG  184
V  95.2% (280/294)  IGHV1-69*12  92   ...A....A...G........................A..........................................G....C....  181
                                      S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  V  Y  M  E  L  S  S  L  R  S  E  D  
                    Query_7195   185  CACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGGACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACA  274
V  95.2% (280/294)  IGHV1-69*12  182  .................................................C....C...................................  271
                                      A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      T  A  V  Y  Y  C  A  R  V  G  K  Y  N  W  N  D  G  I  A  F  D  I  W  G  Q  G  T  I  V  T  
                    Query_7195   275  CGGCCGTTTATTATTGTGCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATCTGGGGCCAAGGGACAATAGTCACCG  364
V  95.2% (280/294)  IGHV1-69*12  272  .......G.....C..........------------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                    
D  100.0% (15/15)   IGHD1-20*01  3    --------------------------------...............-------------------------------------------  17
J  95.7% (45/47)    IGHJ3*02     4    ----------------------------------------------------...T..........................G.......  41

                                               
                                      V  S  S  
                    Query_7195   365  TCTCTTCAG  373
J  95.7% (45/47)    IGHJ3*02     42   .........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_19500

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     5e-89
IGHD4-17*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGAACA	ACTACGGTGAC	CCAC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGAACAACTACGGTGACCCACACTTTGACTCC	ARWNNYGDPHFDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  I  N  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7196   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCATTAATTACTCCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.8% (223/243)  IGHV4-59*01  49   ........................................G..G.....A........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  H  H  S  G  S  T  D  Y  D  P  S  L  K  G  R  V  I  I  S  T  Y  T  P  K  N 
                    Query_7196   91   TGGATTGGGTATTTCCACCACAGTGGGAGCACCGACTACGACCCCTCCCTCAAGGGTCGAGTCATCATATCAACATACACGCCCAAGAAC  180
V  91.8% (223/243)  IGHV4-59*01  139  ............A..T.TT..............A.....A..............A.........C.......GT.G.....T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  H  S  V  I  A  A  D  T  A  V  Y  Y  C  A  R  W  N  N  Y  G  D  P  H  F 
                    Query_7196   181  CAGTTTTCCCTGAAGCTGCACTCTGTGATCGCTGCGGACACGGCCGTGTATTATTGTGCGAGATGGAACAACTACGGTGACCCACACTTT  270
V  91.8% (223/243)  IGHV4-59*01  229  .....C............AG........C........................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (11/11)   IGHD4-17*01  3    ----------------------------------------------------------------------...........---------  13
J  91.1% (41/45)    IGHJ4*02     4    -------------------------------------------------------------------------------------.....  8

                                      ----->                                  
                                       D  S  W  G  Q  G  A  L  V  V  V  S  S  
                    Query_7196   271  GACTCCTGGGGCCAGGGAGCCCTGGTCGTCGTCTCCTCAG  310
J  91.1% (41/45)    IGHJ4*02     9    ....A.............A........AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_19503

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           371     6e-105
IGHD3-16*01                                                                                           14.1    8.3   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGATTAGAG	ATGCTTA	CAATTATTTTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGATTAGAGATGCTTACAATTATTTTCTTGACTAC	ARVIRDAYNYFLDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	243	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7197   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGTTGG  90
V  97.6% (243/249)  IGHV3-33*01  47   ......................................................................................C...  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  Y  D  G  N  N  K  Y  Y  A  D  S  V  N  G  R  F  T  I  S  R  D  N  S  
                    Query_7197   91   AGTGGGTGGCACTTATATGGTATGATGGAAATAATAAATACTATGCAGACTCCGTGAACGGCCGATTCACTATCTCCAGAGACAATTCCA  180
V  97.6% (243/249)  IGHV3-33*01  137  ...........G..................G...........................G...........C...................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  I  R  D  A  Y  N  
                    Query_7197   181  AGAACACGCTGTATCTGCAAATGAACAACCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGTGATTAGAGATGCTTACAATT  270
V  97.6% (243/249)  IGHV3-33*01  227  ...........................G.........................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-16*01  27   ------------------------------------------------------------------------------.......-----  33

                                      ------------->                                  
                                      Y  F  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7197   271  ATTTTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (42/42)   IGHJ4*02     7    ------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_75134

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           338     5e-95
IGHD1-26*01                                                                                           18.0    0.62 
IGHJ2*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGATACAACGAAA	TATACTGGGACCTAC	GATGGG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGATACAACGAAATATACTGGGACCTACGATGGGTTCGATCTC	ARDDTTKYTGTYDGFDL	258	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	74	24	22	2	0	91.7
FR2-IMGT	75	125	51	47	4	0	92.2
CDR2-IMGT	126	143	21	15	3	3	71.4
FR3-IMGT	144	257	114	106	8	0	93
CDR3-IMGT (germline)	258	265	8	8	0	0	100
Total	N/A	N/A	268	244	21	3	91


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  S  L  S  G  V  S  I  S  G  Y  Y  W  H  W  I  R  
                    Query_7198   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACTTGCTCTCTCTCTGGTGTCTCCATCAGTGGTTACTACTGGCACTGGATCCGGC  90
V  91.0% (244/268)  IGHV4-59*01  26   ................T....................C...A..G.........G..........A...........AG...........  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  N     S  G  G  T  K  Y  S  P  S  L  R  S  R  V  T  
                    Query_7198   91   AGCCCCCAGGGAAGGGACTGGAGTGGATCGGCTATATCAAT---AGCGGGGGCACCAAGTACAGTCCCTCCCTCAGGAGTCGAGTCACCA  177
V  91.0% (244/268)  IGHV4-59*01  116  ............................T..G......T..TAC..T...A.......C....AC..........A..............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  F  Y  Y  C  A  R  D  
                    Query_7198   178  TATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAACTGACCTCTGTGACCGCTGCGGACACGGCCTTTTATTACTGTGCGAGAGACG  267
V  91.0% (244/268)  IGHV4-59*01  206  .....................................G....G.........................G.G.................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -----------CDR3-IMGT-------------------->                                  
                                      D  T  T  K  Y  T  G  T  Y  D  G  F  D  L  *  G  R  G  T  L  V  T  V  S  S  
                    Query_7198   268  ATACAACGAAATATACTGGGACCTACGATGGGTTCGATCTCTAGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  342
D  86.7% (13/15)    IGHD1-26*01  3    -----------....G.....G....-------------------------------------------------  17
J  97.7% (42/43)    IGHJ2*01     11   --------------------------------..........G................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_45672

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           299     3e-83
IGHD1-26*01                                                                                           12.2    35   
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTCTGGATCTCT	TGGGAG	GCGACAC	TGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCTGGATCTCTTGGGAGGCGACACTGACGAC	ATLDLLGGDTDD	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	43	8	0	84.3
CDR2-IMGT	146	169	24	16	8	0	66.7
FR3-IMGT	170	283	114	94	20	0	82.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	239	48	0	83.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  A  G  S  T  V  K  V  S  C  K  T  S  R  A  T  F  S  S  N
                    Query_7199   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGGCTGGGTCCACGGTGAAGGTCTCCTGCAAGACTTCCAGGGCCACCTTCAGCAGCAA  90
V  83.3% (239/287)  IGHV1-69*06  6    ..................G...............C........T....................G....TG.A.G.............T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        T  F  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  A  I  I  P  T  L  R  T  T  N  Y  A  Q
                    Query_7199   91   CACCTTCACTTGGGTGCGCCAGGCCCCGGGACAAGGGCTTGAGTGGATGGGGGCCATCATCCCCACCCTGCGCACGACAAACTACGCACA  180
V  83.3% (239/287)  IGHV1-69*06  96   TG.TA...GC........A........T.......................A.GG........T.T.T.TG.T..AG.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  R  S  S  S  T  S  Y  M  G  L  S  G  L  T  P  E  D  T  A
                    Query_7199   181  GAGGTTCCAAGGCAGAGTCACCATAACCGCGGACAGGTCTTCGAGTACAAGTTATATGGGACTGAGCGGTCTGACTCCTGAGGACACGGC  270
V  83.3% (239/287)  IGHV1-69*06  186  ..A......G...........G..T..........AA..CA....C...GCC..C....AG......A.C....GAT.............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                               
                                        V  Y  Y  C  A  T  L  D  L  L  G  G  D  T  D  D  W  G  P  G  T  L  V  T  V  S  
                    Query_7199   271  CGTGTATTACTGTGCGACTCTGGATCTCTTGGGAGGCGACACTGACGACTGGGGCCCGGGAACCCTGGTCACCGTCTCCT  350
V  83.3% (239/287)  IGHV1-69*06  276  .................---------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                 
D  100.0% (6/6)     IGHD1-26*01  8    -----------------------------......---------------------------------------------  13
J  94.7% (36/38)    IGHJ4*02     8    ------------------------------------------....T.........A.......................  45


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_302449

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7200   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7200   91   TGGATTGGTCATATCTATCACAGTGGCAGCACTAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........GT........T.......G.....C.........................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_7200   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.1% (233/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7200   271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_145072

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           346     2e-97
IGHD3-3*01                                                                                            14.1    8.5  
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	CTG	TTTTTGG	CGCAGCGAATGATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCTGTTTTTGGCGCAGCGAATGATAACTACGGTATGGACGTC	ARAVFGAANDNYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7201   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGGTATTGGATACACTGGGTCCGTCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-74*01  47   ..............................................C..C.....G...........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  H  I  N  S  D  G  S  T  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7201   91   TTTGGGTCTCACATATTAACAGTGATGGGAGTACCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-74*01  137  .G..........G......T.............G.....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  V  F  G  A  A  N  
                    Query_7201   181  AGAATACCCTGTATCTACAATTGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGAGCTGTTTTTGGCGCAGCGAATG  270
V  94.4% (235/249)  IGHV3-74*01  227  ....C..G........G...A...............................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-3*01   10   ------------------------------------------------------------------------.......-----------  16

                                      T------------------>                                 
                                      D  N  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7201   271  ATAACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  100.0% (50/50)   IGHJ6*02     13   ---..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_19509

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           333     1e-93
IGHD2-8*01                                                                                            21.8    0.042
IGHJ2*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-8*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAGG	GGATATTGTAC	AAGTTCCCGGTGCTCTATGA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAGGGGATATTGTACAAGTTCCCGGTGCTCTATGAACTTCGATCTC	ARGRGYCTSSRCSMNFDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  D  Y  A  M  N  W  V  R  Q  P  P  G  K  G  L  
                    Query_7202   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTGACTATGCCATGAATTGGGTCCGCCAACCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-21*01  47   ....................................C.......AG....AG......C...........GG..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  R  S  S  I  Y  I  F  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  D  A  
                    Query_7202   91   AGTGGGTCTCATCCATTAGTCGTAGTAGTATTTACATTTTCTACGCAGACTCATTGAAGGGCCGATTCACCATCTCCAGAGACGACGCCA  180
V  92.8% (231/249)  IGHV3-21*01  137  ....................A.........G......A.A.............G.............................A......  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  D  L  Q  M  N  S  L  R  D  E  D  T  A  F  Y  Y  C  A  R  G  R  G  Y  C  T  S  
                    Query_7202   181  AGAACTCACTGGATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTTTCTATTACTGTGCGAGAGGGAGGGGATATTGTACAAGTT  270
V  92.8% (231/249)  IGHV3-21*01  227  ...........T........................C.............G.G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD2-8*01   2    --------------------------------------------------------------------------...........-----  12

                                      IMGT--------------------->                                  
                                      S  R  C  S  M  N  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_7202   271  CCCGGTGCTCTATGAACTTCGATCTCTGGGGCCGTGGCACCCTCGTCACTGTCTCCTCAG  330
J  97.8% (44/45)    IGHJ2*01     9    ---------------............................G................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_216568

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            383     1e-108
IGHD3-9*01                                                                                            35.3    4e-06 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	ATTACGATATCTTGACTGGTAATT	GGGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCATTACGATATCTTGACTGGTAATTGGGCGTTTGATTAC	ARDHYDILTGNWAFDY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	268	23	0	92.1


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  D  Y
                    Query_7203  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACTTTCAGCGACTA  90
V  92.1% (268/291)  IGHV1-2*04  6    ..................G...........................................................C....C..G...  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       Y  I  H  W  V  R  Q  G  P  G  Q  G  L  E  W  M  G  W  I  N  P  R  T  G  D  T  N  Y  A  Q
                    Query_7203  91   CTATATCCACTGGGTGCGACAGGGCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTCGGACTGGAGACACAAATTATGCACA  180
V  92.1% (268/291)  IGHV1-2*04  96   ......G................C........................................AAC.G...T.G......C........  185
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       R  F  Q  G  W  V  T  M  S  R  D  T  S  T  T  T  V  Y  M  D  L  S  R  L  K  S  D  D  T  A
                    Query_7203  181  GAGGTTTCAGGGCTGGGTCACCATGTCTAGGGACACGTCCACCACCACAGTTTACATGGACCTGAGCAGGCTGAAATCTGACGACACGGC  270
V  92.1% (268/291)  IGHV1-2*04  186  ..A......................A.C.............T..G.....CC........G.............G...............  275
                                       K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                     ------------><-------------------CDR3-IMGT------------------>                             
                                       V  Y  Y  C  A  R  D  H  Y  D  I  L  T  G  N  W  A  F  D  Y  W  G  Q  G  T  L  L  T  V  S
                    Query_7203  271  CGTTTATTACTGTGCGAGAGATCATTACGATATCTTGACTGGTAATTGGGCGTTTGATTACTGGGGCCAGGGAACCCTGCTCACCGTCTC  360
V  92.1% (268/291)  IGHV1-2*04  276  ...G.................---------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                        
D  91.7% (22/24)    IGHD3-9*01  3    -----------------------..........T.........T...-------------------------------------------  26
J  95.3% (41/43)    IGHJ4*02    6    ----------------------------------------------------.....C.....................G..........  43

                                          
                                       S  
                    Query_7203  361  CTCAG  365
J  95.3% (41/43)    IGHJ4*02    44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_15998

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           369     2e-104
IGHD6-19*01                                                                                           12.2    34    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	GCTCCAG	GGCTGG	GATT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCCAGGGCTGGGATTCTTTGACTAT	AAPGLGFFDY	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	261	25	0	91.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  A  S  G  N  T  L  T  N  N
                    Query_7204   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCGTCAGTGAAAGTTGCCTGCAAGGCATCCGGAAACACCCTCACCAACAA  90
V  91.3% (261/286)  IGHV1-46*01  6    ..................G.......................C........G...T.............T...T.....T......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  N  K  T  T  Y  A  Q
                    Query_7204   91   CTTCATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTAATAAGACAACCTATGCACA  180
V  91.3% (261/286)  IGHV1-46*01  96   ..AT..................................................................GG..GC....G...C.....  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  L  T  V  T  R  V  T  S  T  R  T  V  Y  M  E  L  S  N  L  R  S  E  D  T  A
                    Query_7204   181  GAAGTTCCAGGGCAGACTGACCGTGACTAGGGTCACGTCCACGAGAACAGTCTACATGGAGCTGAGCAACCTGAGATCTGAGGACACGGC  270
V  91.3% (261/286)  IGHV1-46*01  186  ................G.C...A....C....A............C......................G.....................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        V  Y  Y  C  A  A  P  G  L  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_7204   271  CGTGTATTACTGCGCGGCTCCAGGGCTGGGATTCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  347
V  91.3% (261/286)  IGHV1-46*01  276  ............T...-------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                              
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------......------------------------------------------------  18
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------.........C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_15999

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            333     1e-93
IGHD3-3*02                                                                                            12.2    31   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTT	GCATTT	CGATCTCCCACGAGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGCATTTCGATCTCCCACGAGGCATGGACGTC	ARLHFDLPRGMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  T  Y  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_7205  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGGGGCTCCATCACCAGTACTTACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  93.5% (229/245)  IGHV4-4*01  49   ..................G....C.....T..........G.....G.A.........G...........................G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  S  G  S  P  H  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_7205  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCCCCCACTACAGTCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  93.5% (229/245)  IGHV4-4*01  139  .................................A..A......AC.............................................  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                      N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  W  C  A  R  L  H  F  D  L  P  R  G 
                    Query_7205  181  AACCAGTTCTCCCTGAAGTTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTGGTGTGCGAGGTTGCATTTCGATCTCCCACGAGGC  270
V  93.5% (229/245)  IGHV4-4*01  229  ..................C....C.............................T..C........-------------------------  293
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  100.0% (6/6)     IGHD3-3*02  7    --------------------------------------------------------------------......----------------  12

                                     -------->                                 
                                      M  D  V  W  G  Q  G  T  T  A  I  V  S  S 
                    Query_7205  271  ATGGACGTCTGGGGCCAAGGGACCACGGCCATCGTCTCCTCA  312
J  95.2% (40/42)    IGHJ6*02    21   ............................T..C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_202898

Length=410
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           406     1e-115
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGAC	GTATTACTATGATACTGATAATTATTACTAC	GGCCCCTGTTTA	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGACGTATTACTATGATACTGATAATTATTACTACGGCCCCTGTTTAGACTTC	ARDRTYYYDTDNYYYGPCLDF	289	351	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	278	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  M  R  V  S  C  K  A  S  G  G  T  F  S 
                    Query_7206   1    CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGATGAGGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  90
V  93.9% (278/296)  IGHV1-69*01  1    ...................................................G...A..................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  S  A  V  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  V  I  P  F  F  G  T  P  H  Y 
                    Query_7206   91   ACCTCTGCTGTCAGCTGGGTGCGACAGGCCCCGGGACAAGGACTTGAGTGGATGGGAGGGGTCATCCCTTTCTTTGGGACACCACATTAC  180
V  93.9% (278/296)  IGHV1-69*01  91   .G..A....A......................T........G..................A........A.......T...G..A.C...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  V  Y  M  E  L  T  R  L  R  S  E  D 
                    Query_7206   181  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACGGTCTACATGGAGCTGACCAGACTGAGATCTGAGGAC  270
V  93.9% (278/296)  IGHV1-69*01  181  .....................................................A.C..............G...C...............  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------------------CDR3-IMGT-------------------------->         
                                       T  A  V  Y  Y  C  A  R  D  R  T  Y  Y  Y  D  T  D  N  Y  Y  Y  G  P  C  L  D  F  W  G  Q 
                    Query_7206   271  ACGGCCGTCTATTACTGTGCGAGAGATAGGACGTATTACTATGATACTGATAATTATTACTACGGCCCCTGTTTAGACTTCTGGGGCCAG  360
V  93.9% (278/296)  IGHV1-69*01  271  ........G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  83.9% (26/31)    IGHD3-22*01  1    --------------------------------..............G.AG.GG..........---------------------------  31
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------....A..........  23

                                                               
                                       G  T  L  V  T  V  S  S  
                    Query_7206   361  GGAACCCTGGTCACCGTCTCCTCAG  385
J  97.5% (39/40)    IGHJ4*02     24   .........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40183344


Query= Query_202899

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           336     1e-94
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	N/A	AGCGAGGGCCTGCCTGGCACAC	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCGAGGGCCTGCCTGGCACACTGCTTTTGATATC	AKRGPAWHTAFDI	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	228	13	0	94.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7207   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTCGTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.6% (228/241)  IGHV4-59*08  49   ...........................................G..AC.......G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  N  G  G  N  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7207   91   TGGATTGGGTATATCTTTAACGGTGGGAACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  94.6% (228/241)  IGHV4-59*08  139  ................A.T..A......G.......................A.....................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  R  G  P  A  W  H  T  A  F 
                    Query_7207   181  CAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTATATTATTGTGCGAAGCGAGGGCCTGCCTGGCACACTGCTTTT  270
V  94.6% (228/241)  IGHV4-59*08  229  ..............G....G...........................G.....C.......-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
J  100.0% (47/47)   IGHJ3*02     4    -----------------------------------------------------------------------------------.......  10

                                      ----->                                  
                                       D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7207   271  GATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  310
J  100.0% (47/47)   IGHJ3*02     11   ........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_215536

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            339     2e-95
IGHD1-26*01                                                                                           18.0    0.61 
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAACAGTTTGTTGGCACCTG	AGTGGGAGC	CTGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACAGTTTGTTGGCACCTGAGTGGGAGCCTGATGATGCTTTTGATATC	ARVNSLLAPEWEPDDAFDI	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  R  S  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_7208   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGCAGAAGCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.9% (232/247)  IGHV4-4*02   49   ...............................G............T..T.A........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  N  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  K  S  K 
                    Query_7208   91   GAGTGGATTGGGGAGATCTATCATGGTGGGAATACCAACTACAACCCGTCCCTCAAGAGTCGACTTACTATATCAGTAGACAAGTCCAAG  180
V  93.9% (232/247)  IGHV4-4*02   139  ..............A.........A......GC..............................G.C..C.....................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       N  Q  F  S  L  Q  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  S  L  L  A  P  E 
                    Query_7208   181  AACCAATTCTCCCTGCAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGAGAGTTAACAGTTTGTTGGCACCTGAG  270
V  93.9% (232/247)  IGHV4-4*02   229  .....G.........A.......C..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD1-26*01  6    ----------------------------------------------------------------------------------------..  7

                                      MGT----------------------->                                  
                                       W  E  P  D  D  A  F  D  I  W  G  Q  G  T  L  A  I  V  S  S  
                    Query_7208   271  TGGGAGCCTGATGATGCTTTTGATATCTGGGGCCAAGGGACATTGGCCATCGTCTCTTCAG  331
D  100.0% (9/9)     IGHD1-26*01  8    .......------------------------------------------------------  14
J  94.0% (47/50)    IGHJ3*02     1    -----------...............................A...T..C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_202894

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           316     2e-88
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCTCAG	AGTAGTACCAACTGTTATG	GGCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCAGAGTAGTACCAACTGTTATGGGCTTCTACTACTACGGTATGGACGTC	ARGLRVVPTVMGFYYYGMDV	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	240	117	108	6	3	92.3
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	227	18	3	91.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  G  G  S  F  S  T  Y  Y  W  T  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_7209   1    ACCCTGTCCCTCACCTGCACTGTCTATGGTGGGTCCTTCAGCACTTACTACTGGACCTGGATCCGCCAGACCCCAGGGAAGGGGCTGGAG  90
V  91.5% (227/248)  IGHV4-34*01  49   ..................G......................TGG...........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><-----------------------------------------------------FR3
                                       W  I  G  E  I  Y  V  G  G  G  T  T  N  Y  N  P  S  P  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_7209   91   TGGATTGGGGAAATCTATGTCGGTGGAGGCACCACCAACTACAACCCGTCCCCCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAG  180
V  91.5% (227/248)  IGHV4-34*01  139  ...............A..CATA.....A.....---................T..................A..................  225
                                       W  I  G  E  I  N  H  S  G  S  T     N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                      -IMGT------------------------------------------------------><-------------------------CDR3
                                       N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  G  L  R  V  V  P  T  V 
                    Query_7209   181  AACCAGTTCTCCCTGAACCTGAGCTCTGTGACCGCCGCGGACACGGCTATGTACTACTGCGCGAGAGGCCTCAGAGTAGTACCAACTGTT  270
V  91.5% (227/248)  IGHV4-34*01  226  .................G..............................G....T.....T........----------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                      
D  89.5% (17/19)    IGHD2-2*01   11   --------------------------------------------------------------------------..........G...C.  26

                                      -IMGT------------------------>                                 
                                       M  G  F  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7209   271  ATGGGCTTCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
D  89.5% (17/19)    IGHD2-2*01   27   ...------------------------------------------------------------  29
J  100.0% (55/55)   IGHJ6*02     8    --------.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_202895

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           332     4e-93
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*01                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	ACGTAC	TTACTATGACAGTAGT	TCTTACCGCGAGGAGTATCCTTTTATCTTTATGATC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAACGTACTTACTATGACAGTAGTTCTTACCGCGAGGAGTATCCTTTTATCTTTATGATCGACTAC	ARERTYYDSSSYREEYPFIFMIDY	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7210   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-48*03  47   .....................................C......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  H  I  S  R  D  G  G  D  I  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_7210   91   AGTGGATTTCACACATTAGTAGGGATGGTGGTGACATTTACTACGCAGACTCTGTGAGGGGCCGCTTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-48*03  137  .....G.....T..........TAG....A..AC...A...................A......A.........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      N  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  E  R  T  Y  Y  D  S  
                    Query_7210   181  ACAACTCACTGTTTCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCTGTTTATTTCTGTGCGAGGGAACGTACTTACTATGACAGTA  270
V  92.4% (231/250)  IGHV3-48*03  227  .G..........A............C...............................A.........A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.8% (15/16)    IGHD3-22*01  4    ----------------------------------------------------------------------------.........T....  17

                                      ----CDR3-IMGT------------------------------>                                  
                                      S  S  Y  R  E  E  Y  P  F  I  F  M  I  D  Y  W  G  H  G  T  L  V  T  V  S  S  
                    Query_7210   271  GTTCTTACCGCGAGGAGTATCCTTTTATCTTTATGATCGACTACTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  348
D  93.8% (15/16)    IGHD3-22*01  18   ..----------------------------------------------------------------------------  19
J  97.5% (39/40)    IGHJ4*01     9    --------------------------------------..............A.........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_15990

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     3e-93
IGHD2-15*01                                                                                           21.8    0.039
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AAAGTCT	GATATTGTAGT	CCC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGTCTGATATTGTAGTCCCTATGGACGTC	AKSDIVVPMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7211   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.4% (228/244)  IGHV3-21*01  47   .............................................G......C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  V  G  T  Y  I  E  Y  A  S  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_7211   91   AGTGGGTCTCGTACATTTCTAGTGTTGGTACTTACATAGAGTACGCAAGCTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  93.4% (228/244)  IGHV3-21*01  137  ..........A.C....AG....AG.A...G.......T.C......GA......................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  S  D  I  V  V  P  M  
                    Query_7211   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGCAAAGTCTGATATTGTAGTCCCTATGG  270
V  93.4% (228/244)  IGHV3-21*01  227  .........................................................A......--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD2-15*01  3    -----------------------------------------------------------------------...........--------  13
J  100.0% (43/43)   IGHJ6*02     20   -------------------------------------------------------------------------------------.....  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7211   271  ACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  308
J  100.0% (43/43)   IGHJ6*02     25   ......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_202897

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            283     1e-78
IGHD3-16*01                                                                                           12.2    37   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTCATCCCCA	GGGGGA	CCTA	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTCATCCCCAGGGGGACCTATCGACCCC	ARSSSPGGPIDP	300	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	77	27	23	4	0	85.2
FR2-IMGT	78	164	87	49	2	36	56.3
CDR2-IMGT	165	185	21	19	2	0	90.5
FR3-IMGT	186	299	114	101	13	0	88.6
CDR3-IMGT (germline)	300	305	6	6	0	0	100
Total	N/A	N/A	305	245	24	36	80.3


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  L  S  C  S  V  S  G  G  S  L  S  R  T  N  W  W  T  W  V  
                    Query_7212   1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCTCCTGCTCTGTCTCTGGTGGCTCCCTGAGCAGGACTAACTGGTGGACTTGGGTCC  90
V  80.3% (245/305)  IGHV4-4*02   26   ................T..................A.....G.................A.C.....T.G...........G........  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------------------------FR2-IMGT---------------------------------------><-----CDR2-IMGT-
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  S  S  T  T  D  I  G  E  M  Y  H  S  G  
                    Query_7212   91   GCCAGCCCCCCGGGAAGGGGCTGGAGTGGATTGGAGAAATCTATCATAGTAGCAGTACCACCGACATTGGGGAAATGTATCATAGTGGGC  180
V  80.3% (245/305)  IGHV4-4*02   116  ..........A..................------------------------------------...........C............A  169
                                      R  Q  P  P  G  K  G  L  E  W                                      I  G  E  I  Y  H  S  G  

                                      ----><----------------------------------------------------FR3-IMGT------------------------
                                      R  T  N  Y  S  P  S  L  K  S  R  L  T  I  S  L  D  K  S  M  T  H  F  S  L  T  L  P  S  V  
                    Query_7212   181  GCACCAACTACAGCCCGTCCCTCAAGAGTCGACTCACCATATCACTGGACAAGTCCATGACCCATTTCTCCCTGACGTTGCCCTCTGTGA  270
V  80.3% (245/305)  IGHV4-4*02   170  ............A...................G...........G.A..........A..A...G..........A.C..AG........  259
                                      S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  

                                      ----------------------------><-------------CDR3-IMGT------------>                         
                                      T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  S  P  G  G  P  I  D  P  W  G  Q  G  T  L  V  T  
                    Query_7212   271  CCGCCGCGGACACGGCCGTCTATTATTGTGCGAGATCCTCATCCCCAGGGGGACCTATCGACCCCTGGGGCCAGGGAACCCTGGTCACCG  360
V  80.3% (245/305)  IGHV4-4*02   260  ...................G.....C.........-------------------------------------------------------  294
                                      T  A  A  D  T  A  V  Y  Y  C  A  R                                                        
D  100.0% (6/6)     IGHD3-16*01  18   -----------------------------------------------......-------------------------------------  23
J  100.0% (42/42)   IGHJ5*02     10   ---------------------------------------------------------.................................  42

                                               
                                      V  S  S  
                    Query_7212   361  TCTCCTCAG  369
J  100.0% (42/42)   IGHJ5*02     43   .........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_15996

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           343     2e-96
IGHD3-9*01                                                                                            44.9    5e-09
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	TCTCCGAAGCC	TATTACGATATTATGACTGATTATTATAA	GGGGGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CTCAGAGTCTCCGAAGCCTATTACGATATTATGACTGATTATTATAAGGGGGCTTTTGACTTC	LRVSEAYYDIMTDYYKGAFDF	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	4	3	0	57.1
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_7213   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTACTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-74*01  47   ........................................C....G..........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  S  R  I  S  S  D  G  S  K  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7213   91   CTTGGGTCTCACGTATCAGTAGTGATGGGAGTAAGACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (234/249)  IGHV3-74*01  137  TG..............T.A..............GC....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  L  R  V  S  E  A  Y  Y  D  
                    Query_7213   181  AGAACACGCTCTATCTGCAAATGAACAGTCTGAGAGACGAGGACACGGCTGTGTATTACTGTCTCAGAGTCTCCGAAGCCTATTACGATA  270
V  94.0% (234/249)  IGHV3-74*01  227  ..........G.........................C.........................GCA....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.1% (27/29)    IGHD3-9*01   2    --------------------------------------------------------------------------------..........  11

                                      DR3-IMGT-------------------------->                                  
                                      I  M  T  D  Y  Y  K  G  A  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7213   271  TTATGACTGATTATTATAAGGGGGCTTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  93.1% (27/29)    IGHD3-9*01   12   ..T......G.........--------------------------------------------------  30
J  97.7% (42/43)    IGHJ4*02     6    --------------------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_15997

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           350     8e-99
IGHD2-8*02                                                                                            19.9    0.16 
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	TATTGTACTAGTAGTG	GCTG	CTACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTATTGTACTAGTAGTGGCTGCTACAACGCTATGGACGTC	AREYCTSSGCYNAMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  T  R  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7214   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTAACTAGATATGAAATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-48*03  47   ........................................C.G...T................................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  V  S  Y  I  S  S  S  A  N  I  I  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  A  
                    Query_7214   91   AGTGCGTTTCATACATTAGTAGTAGTGCTAATATCATATATTACGCAGACTCTGTGAAGGGCCGATTCAGCATCTCCAGAGACAACGCCA  180
V  94.8% (237/250)  IGHV3-48*03  137  ....G......................G..G..C......C............................C....................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  Y  C  T  S  S  G  
                    Query_7214   181  AGAACTCACTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTGCGAGAGAGTATTGTACTAGTAGTGGCT  270
V  94.8% (237/250)  IGHV3-48*03  227  ................G.................................G.......C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD2-8*02   5    -----------------------------------------------------------------------.........G..G...---  20

                                      T------------------>                                 
                                      C  Y  N  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7214   271  GCTACAACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.2% (50/52)    IGHJ6*02     11   -....T...G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_202892

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           343     2e-96
IGHD3-16*01                                                                                           14.1    8.7  
IGHJ3*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTCAA	GGGGGAG	ATGGGTCACCTCCGGGTTCA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTCAAGGGGGAGATGGGTCACCTCCGGGTTCAGATGCTTTTGATATC	AKVQGGDGSPPGSDAFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  T  F  R  N  Y  V  M  T  W  V  R  Q  A  P  G  N  G  L  
                    Query_7215   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTAGATTCACCTTTAGGAACTATGTCATGACCTGGGTCCGCCAGGCTCCAGGGAATGGGCTGG  90
V  94.0% (234/249)  IGHV3-23*01  47   .............................G.............C.G.....C.....G........................G.......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  A  S  G  V  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7215   91   AGTGGGTCTCAGCGATTAGTGCTAGTGGTGTTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (234/249)  IGHV3-23*01  137  .............T.......G........G...........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  S  V  E  M  N  S  L  G  A  E  D  T  P  V  Y  F  C  A  K  V  Q  G  G  D  G  S  
                    Query_7215   181  AGAACACGCTGTCTGTGGAAATGAACAGCCTGGGAGCCGAGGACACGCCCGTATATTTCTGTGCGAAAGTTCAAGGGGGAGATGGGTCAC  270
V  94.0% (234/249)  IGHV3-23*01  227  ............A.C..C..............A..............G.........A...........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-16*01  18   --------------------------------------------------------------------------.......---------  24

                                      IMGT--------------------->                               
                                      P  P  G  S  D  A  F  D  I  W  G  Q  G  T  M  V  S  V  S  
                    Query_7215   271  CTCCGGGTTCAGATGCTTTTGATATCTGGGGCCAGGGGACAATGGTCTCCGTCTCTT  327
J  95.7% (44/46)    IGHJ3*02     2    -----------.......................A............A.........  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_75135

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           402     3e-114
IGHD1-26*01                                                                                           27.6    9e-04 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTC	ARHGDDSGSYLYYFYGMDV	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	102	12	0	89.5
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	276	19	0	93.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  T  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_7216   3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGACAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCA  92
V  93.6% (276/295)  IGHV5-51*01  2    .................................A...................................G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  V  G  I  M  Y  P  G  D  S  D  T  R  Y  
                    Query_7216   93   ATTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGGTGGGGATCATGTATCCTGGTGACTCTGATACCAGATATA  182
V  93.6% (276/295)  IGHV5-51*01  92   GC..........G.....................................A..........C..........................C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  R  S  R  R  A  S  D  
                    Query_7216   183  GCCCGTCTTTCGAGGGCCACGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTATTTGCAGTGGAGGAGCCGGAGGGCCTCGGACA  272
V  93.6% (276/295)  IGHV5-51*01  182  .......C...C.A.....G......................................CC..........C....T..A...........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  F  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  P  G  T  
                    Query_7216   273  CCGCCATATATTTCTGTGCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTCTGGGGCCCGGGGACCA  362
V  93.6% (276/295)  IGHV5-51*01  272  .......G....A............-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (14/14)   IGHD1-26*01  4    ---------------------------------..............-------------------------------------------  17
J  93.0% (53/57)    IGHJ6*02     6    --------------------------------------------------.......A......T................AA.......  45

                                                       
                                      T  V  T  V  S  S 
                    Query_7216   363  CGGTCACCGTCTCCTCA  379
J  93.0% (53/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_176829

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           325     3e-91
IGHD2-21*02                                                                                           16.1    2.3  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCACAAGTTGACGG	TGTGGCAGTGACTG	GCGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCACAAGTTGACGGTGTGGCAGTGACTGGCGGGTGGTTCGCCCCC	ARSQVDGVAVTGGWFAP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	26	26	25	1	0	96.2
CDR1-IMGT	27	56	30	25	5	0	83.3
FR2-IMGT	57	107	51	44	7	0	86.3
CDR2-IMGT	108	128	21	18	3	0	85.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  S  L  T  C  S  V  S  G  D  S  V  S  S  A  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  E  
                    Query_7217   1    CCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCGTCAGCAGTGCTTCCTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGAAC  90
V  91.9% (228/248)  IGHV4-61*01  50   ..................C...........G..............G.AGT..........G..........................G..  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  S  I  G  Y  V  Y  Y  S  G  A  T  N  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  
                    Query_7217   91   TTGAATCAATTGGCTATGTCTATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGGGTCGAGTCACCATATCAGTGGACACGTCCA  180
V  91.9% (228/248)  IGHV4-61*01  140  .G..G.GG.....G...A..............AG.........................A...................A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  S  Q  V  D  G  V  A  
                    Query_7217   181  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCATCTATTACTGTGCGAGATCACAAGTTGACGGTGTGGCAG  270
V  91.9% (228/248)  IGHV4-61*01  230  ..................................................G.G...............----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  85.7% (12/14)    IGHD2-21*02  8    ----------------------------------------------------------------------------------.....TG.  15

                                      GT-------------------->                                  
                                      V  T  G  G  W  F  A  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7217   271  TGACTGGCGGGTGGTTCGCCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  85.7% (12/14)    IGHD2-21*02  16   ......---------------------------------------------------  21
J  97.8% (45/46)    IGHJ5*02     6    -----------.......A......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_176828

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           347     7e-98
IGHD4-17*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGTGG	TACGGTGACTAC	TC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGTGGTACGGTGACTACTCTGATGGTTTTGATATC	AKPWYGDYSDGFDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  N  Y  A  M  A  W  V  C  Q  A  P  G  K  G  L  
                    Query_7218   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTTAGCAACTATGCCATGGCCTGGGTCTGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-23*01  47   ...................................A.........G..........AG.......C........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  G  S  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7218   91   AGTGGGTCTCATCTATTCGAGGTAGTGGTAGTAATACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (235/248)  IGHV3-23*01  137  ...........G.....A.T.........G...GC.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  P  W  Y  G  D  Y  S  
                    Query_7218   181  AGAACACGCTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATATTACTGTGCGAAACCGTGGTACGGTGACTACTCTG  270
V  94.8% (235/248)  IGHV3-23*01  227  .................C................................G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD4-17*01  5    --------------------------------------------------------------------------............----  16
J  98.0% (49/50)    IGHJ3*02     1    ----------------------------------------------------------------------------------------..  2

                                      ------------->                                  
                                      D  G  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7218   271  ATGGTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  318
J  98.0% (49/50)    IGHJ3*02     3    ...C............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_176826

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           280     1e-77
IGHD6-25*01                                                                                           18.0    0.59 
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTG	GCAGCGGCT	GCCACGAACTTCTATCACGACGAAC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCTGGCAGCGGCTGCCACGAACTTCTATCACGACGAACTGGACGTC	VRDLAAAATNFYHDELDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	13	8	0	61.9
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	212	33	0	86.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  P  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7219   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCCCTGGCTTCTACTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  86.5% (212/245)  IGHV4-59*01  49   .............................T.........AG.A.T.A...........................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  L  Y  Y  N  G  E  S  N  Y  N  P  S  L  K  S  R  V  S  I  S  L  D  M  S  K  S 
                    Query_7219   91   TGGATTGGCCACCTCTACTACAATGGCGAGTCCAACTACAATCCCTCCCTCAAGAGTCGAGTCTCCATTTCTCTGGACATGTCCAAGAGT  180
V  86.5% (212/245)  IGHV4-59*01  139  ........GT.TA....T....G...GAGCA..........C.....................A....A..AG.A....C........AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  F  T  S  V  T  A  A  D  T  A  V  Y  F  C  V  R  D  L  A  A  A  A  T  N  F 
                    Query_7219   181  CAGTTCTCCCTGAAGTTCACTTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGTGAGAGATCTGGCAGCGGCTGCCACGAACTTC  270
V  86.5% (212/245)  IGHV4-59*01  229  ...............C.G.GC...............................A.....C......-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-25*01  8    ---------------------------------------------------------------------.........------------  16

                                      -------------------->                                 
                                       Y  H  D  E  L  D  V  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_7219   271  TATCACGACGAACTGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTCA  324
J  97.6% (40/41)    IGHJ6*02     22   -------------........................C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_176825

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           288     4e-80
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	239	271	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	10	1	0	90.9
CDR1-IMGT	26	49	24	19	5	0	79.2
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	21	3	0	87.5
FR3-IMGT	125	238	114	104	10	0	91.2
Total	N/A	N/A	224	204	20	0	91.1


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  L  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_7220   15   GTACAGCGTCTGGACTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAATGGGTGGCAGTTATAT  104
V  91.1% (204/224)  IGHV3-33*03  65   ..G...........T....C..C.....C.....C......................................G................  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      W  Y  D  G  I  K  K  F  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  D  S  K  N  T  L  F  L  
                    Query_7220   105  GGTATGATGGCATTAAAAAATTCTATGCAGACTCCGTGAAGGGCCGACTCACCATCTCCAGAGACGACTCCAAGAACACCCTGTTTCTGC  194
V  91.1% (204/224)  IGHV3-33*03  155  ..........A.G...T....A.........................T.................A.............G....A.....  244
                                      W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------CDR3-IMGT----------->             
                                      Q  M  N  S  L  R  A  D  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  D  P  W  G  Q  G  
                    Query_7220   195  AGATGAACAGCCTGAGAGCCGACGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCGACCCCTGGGGCCAGGGAA  284
V  91.1% (204/224)  IGHV3-33*03  245  .A....................G.........G.G.....C...----------------------------------------------  288
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                                               
D  90.9% (10/11)    IGHD6-13*01  7    -------------------------------------------------....G......------------------------------  17
J  100.0% (46/46)   IGHJ5*02     6    -----------------------------------------------------------------.........................  30

                                                           
                                      T  L  V  T  V  S  S  
                    Query_7220   285  CCCTGGTCACCGTCTCCTCAG  305
J  100.0% (46/46)   IGHJ5*02     31   .....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_274643

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           346     2e-97
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCCAA	GTATAGAAGTGGC	ACCTACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCCAAGTATAGAAGTGGCACCTACTTTTGACTAT	AREPSIEVAPTFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  T  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  R  R 
                    Query_7221   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTACTGGTGGCTACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAGGAGA  90
V  94.0% (236/251)  IGHV4-61*08  49   .........................................C.G......T...........C.................A....A.G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 
                    Query_7221   91   CTGGAGTGGATTGGCTATATCTATTACACTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACAAGTCG  180
V  94.0% (236/251)  IGHV4-61*08  139  ..............G.............G......C............................................A....C...C  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  P  S  I  E  V  A 
                    Query_7221   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGAGCCAAGTATAGAAGTGGCA  270
V  94.0% (236/251)  IGHV4-61*08  229  ...................A.......................................C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD6-19*01  3    ----------------------------------------------------------------------------......C......-  15

                                      -------------->                                  
                                       P  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7221   271  CCTACTTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  97.7% (42/43)    IGHJ4*02     6    ------........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_176823

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           304     1e-84
IGHD5-18*01                                                                                           18.0    0.60 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	219	25	0	89.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_7222   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  89.8% (219/244)  IGHV4-59*01  50   .....TCC...A..................G........G.AGT.A......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S  
                    Query_7222   94   GGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGCC  183
V  89.8% (219/244)  IGHV4-59*01  140  .......G......T..........G.GC.............................A.T.A....A...................A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F  
                    Query_7222   184  AGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTTG  273
V  89.8% (219/244)  IGHV4-59*01  230  .............G.....C..................A.......G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------------------------.......C.G..A..  15

                                      ------------------->                                  
                                      G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_7222   274  GTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  327
D  83.3% (15/18)    IGHD5-18*01  16   ...---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    -----.............................................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_176822

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           311     4e-87
IGHD1-1*01                                                                                            12.2    32   
IGHJ5*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	TTTC	GGAACG	GTGGGGGCCCTAGTAGAT	TGGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATTTCGGAACGGTGGGGGCCCTAGTAGATTGGATCGACTCC	ANFGTVGALVDWIDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	223	24	0	90.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  T  N  F  A  M  T  W  V  R  Q  P  P  G  K  G  L  
                    Query_7223   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTAACCTTTACCAACTTTGCCATGACCTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  90.3% (223/247)  IGHV3-23*01  47   ..................................C.......G..G..A........G.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  R  D  F  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7223   91   AGTGGGTCTCCTCTATTAGTGGCCGTGATTTTACGACATATTACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  90.3% (223/247)  IGHV3-23*01  137  ..........AG..........TA...G.GG..GC.....C...........C.................................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  S  L  R  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  N  F  G  T  V  G  A  L  
                    Query_7223   181  AGAACACCCTATCTCTGCGAATGAACAGTCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAATTTCGGAACGGTGGGGGCCCTAG  270
V  90.3% (223/247)  IGHV3-23*01  227  .......G..G.A.....A.........C.......................A..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD1-1*01   10   -----------------------------------------------------------------------......-------------  15

                                      ---------------->                                  
                                      V  D  W  I  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7223   271  TAGATTGGATCGACTCCTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  321
J  93.5% (43/46)    IGHJ5*01     6    -----...T................A..A......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_176821

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*07                                                                                           344     6e-97
IGHD1-7*01                                                                                            25.7    0.003
IGHJ3*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*07	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCACA	ACT	TATAACTGGAACT	TGGATGGTGTCA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAACTTATAACTGGAACTTGGATGGTGTCAATGCTTTTGATATC	TTTYNWNLDGVNAFDI	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	104	10	0	91.2
CDR3-IMGT (germline)	249	254	6	6	0	0	100
Total	N/A	N/A	254	237	17	0	93.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  N  F  S  N  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7224   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCAATTTCAGTAACGCCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.3% (237/254)  IGHV3-15*07  47   .......T.......................TT...C.....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  R  K  S  D  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_7224   91   AGTGGGTCGGCCGTATTAAAAGGAAAAGTGATGGTGAGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATTTCAAGAGATG  180
V  93.3% (237/254)  IGHV3-15*07  137  ......................C....C........G..........................................C..........  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  A  K  D  T  V  Y  L  Q  M  S  S  L  K  A  E  D  A  A  V  Y  H  C  T  T  T  Y  N  W  N  
                    Query_7224   181  ATGCAAAAGACACAGTGTATCTTCAAATGAGCAGCCTGAAAGCCGAGGACGCAGCCGTGTATCACTGTACCACAACTTATAACTGGAACT  270
V  93.3% (237/254)  IGHV3-15*07  227  ..T.....A....GC.......G.......A..........A........A...........T...........----------------  300
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (13/13)   IGHD1-7*01   3    -----------------------------------------------------------------------------.............  15

                                      R3-IMGT------------------>                                  
                                      L  D  G  V  N  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7224   271  TGGATGGTGTCAATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  330
J  100.0% (48/48)   IGHJ3*02     3    ------------................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_176820

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           360     1e-101
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGGTCC	ATTACTATGATAGTA	CTTCTTACTACGGGAGTCGGTTCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGGTCCATTACTATGATAGTACTTCTTACTACGGGAGTCGGTTCCACTTTGACTAC	ARVVHYYDSTSYYGSRFHFDY	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G 
                    Query_7225   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGA  90
V  96.4% (239/248)  IGHV4-61*01  49   .........................................C........................A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_7225   91   CTGGAGTGGATTGGGTACATCTATTACAGAGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTGGACACGTCC  180
V  96.4% (239/248)  IGHV4-61*01  139  .................T...........T....G.......................................A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  V  H  Y  Y  D  S 
                    Query_7225   181  AAGAACCAGTTCTCCCTGCAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGGTGGTCCATTACTATGATAGT  270
V  96.4% (239/248)  IGHV4-61*01  229  ..................A..C..............................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (15/15)   IGHD3-22*01  3    ----------------------------------------------------------------------------..............  16

                                      CDR3-IMGT-------------------------->                                  
                                       T  S  Y  Y  G  S  R  F  H  F  D  Y  W  G  Q  G  S  L  V  T  V  P  S  
                    Query_7225   271  ACTTCTTACTACGGGAGTCGGTTCCACTTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCCCCTCAG  340
D  100.0% (15/15)   IGHD3-22*01  17   .---------------------------------------------------------------------  17
J  95.6% (43/45)    IGHJ4*02     4    -------------------------.......................A..............T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_4097

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           308     4e-86
IGHD3-3*01                                                                                            14.1    8.6  
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGCTGAAC	TTTGGAG	GGGCAATCTGAGGAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGCTGAACTTTGGAGGGGCAATCTGAGGATCTACTACGGTATGGACGTC	ARLAELWRGNLRIYYGMDV	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	18	6	0	75
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	231	214	17	0	92.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  S  F  S  S  F  E  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  I  S  Y  I 
                    Query_7226   13   TGTGCAGCCTCTGGATTCAGCTTCAGTAGTTTTGAAATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGATCTCATACATT  102
V  92.6% (214/231)  IGHV3-48*03  64   ...................C...........A........A.....................................G.T.........  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  N  D  G  Y  A  I  Y  F  T  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  S  L 
                    Query_7226   103  AGTAATGATGGTTATGCCATATACTTCACAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCTCTGTCTCTG  192
V  92.6% (214/231)  IGHV3-48*03  154  ....G.AG....AG.A.........A.G....................................................A....A....  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-----------------------CDR3-IMGT------------
                                       Q  M  S  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  L  A  E  L  W  R  G  N  L  R  I  Y  Y 
                    Query_7226   193  CAAATGAGCAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGACTGGCTGAACTTTGGAGGGGCAATCTGAGGATCTACTAC  282
V  92.6% (214/231)  IGHV3-48*03  244  .......A...........C...............................---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (7/7)     IGHD3-3*01   12   -------------------------------------------------------------.......----------------------  18
J  98.1% (51/52)    IGHJ6*02     11   -----------------------------------------------------------------------------------.......  17

                                      ----------->                                 
                                       G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_7226   283  GGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  327
J  98.1% (51/52)    IGHJ6*02     18   ..................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_4094

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           277     1e-76
IGHD2-15*01                                                                                           12.2    34   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTC	ATTGTA	T	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTCATTGTATTACGGTATGGACGTC	ARGVADDGWRGGRRVSLYYGMDV	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	211	34	0	86.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  H  C  W  T  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_7227   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTTAGTGGTCACTGCTGGACCTGGATTCGCCAGACACCAGGGAAGGGACTGGAA  90
V  86.1% (211/245)  IGHV4-34*01  49   ......................................C......T...A.....G......C......C.C...........G.....G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  M  N  H  K  G  R  T  T  Y  N  P  S  L  M  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7227   91   TGGATTGGTGAGATGAATCACAAAGGCAGGACGACCTACAACCCGTCGCTAATGAGTCGAGTCACCATCTCAGTGGACACGTCCAAGAAT  180
V  86.1% (211/245)  IGHV4-34*01  139  ........G..A..C.....T.GT..A..C..C.A............C..C.A...............A.....A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  L  S  L  R  L  T  S  L  I  A  A  D  T  A  M  Y  Y  C  A  R  G  V  A  D  D  G  W  R  G 
                    Query_7227   181  CAGCTCTCCCTGAGATTGACCTCTTTAATCGCCGCGGACACGGCTATGTATTACTGTGCGAGAGGCGTGGCGGATGACGGGTGGCGGGGG  270
V  86.1% (211/245)  IGHV4-34*01  229  ...T.........AGC...G....G.G.C................G...................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      3-IMGT----------------------------->                                 
                                       G  R  R  V  S  L  Y  Y  G  M  D  V  W  G  Q  G  V  T  V  T  V  S  S 
                    Query_7227   271  GGCAGACGCGTGTCATTGTATTACGGTATGGACGTCTGGGGCCAGGGAGTCACGGTCACCGTCTCCTCA  339
D  100.0% (6/6)     IGHD2-15*01  6    --------------......-------------------------------------------------  11
J  91.7% (44/48)    IGHJ6*02     15   ---------------------.......................A..GAC...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_243928

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     3e-90
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	242	26	6	88.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_7228   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.3% (242/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_7228   91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.3% (242/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_7228   181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.3% (242/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_7228   271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.3% (242/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_4092

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           263     2e-72
IGHD2-8*02                                                                                            16.1    2.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGATGCGGCGGAGTGAATTCGGC	ACTGGTGG	GG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATGCGGCGGAGTGAATTCGGCACTGGTGGGGACTTCTTTGACCAC	ARMRRSEFGTGGDFFDH	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	20	10	0	66.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	94	20	0	82.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	207	39	0	84.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  R  S  V  S  F  L  W  S  W  V  R  Q  D  P  G  K  G 
                    Query_7229   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTGAGGAGTGTGTCTTTCCTCTGGAGCTGGGTCCGCCAGGACCCAGGGAAGGGC  90
V  84.1% (207/246)  IGHV4-31*03  49   ....................................A.C..C....GTGG..A.TA..........A........C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  R  Y  Y  S  G  S  S  R  Y  N  P  S  L  G  S  R  V  S  M  S  L  D  T  S 
                    Query_7229   91   CTGGAGTGGATTGGTTACAGGTATTACAGTGGAAGTAGTCGGTATAATCCGTCCCTCGGGAGTCGAGTTTCCATGTCACTAGACACGTCT  180
V  84.1% (207/246)  IGHV4-31*03  139  ..............G....TC...........G..C.CCTAC..C..C.........AA..........A....A...G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       R  N  Q  F  S  L  K  L  T  S  V  T  T  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  F  G 
                    Query_7229   181  AGGAACCAATTTTCCCTGAAGTTGACCTCAGTGACGACCGCGGACACGGCCATCTATTACTGTGCGCGGATGCGGCGGAGTGAATTCGGC  270
V  84.1% (207/246)  IGHV4-31*03  229  .A......G..C.........C...G...T.....TG..............G.G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      MGT-------------------->                                  
                                       T  G  G  D  F  F  D  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_7229   271  ACTGGTGGGGACTTCTTTGACCACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  328
D  100.0% (8/8)     IGHD2-8*02   11   ........--------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*02     1    ----------...A.......T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_4090

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTC	ARHGDDSGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	283	8	0	97.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_7230   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCACCTA  90
V  97.3% (283/291)  IGHV5-51*01  6    ..............................A...................A...................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  T  R  Y  S  P
                    Query_7230   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  97.3% (283/291)  IGHV5-51*01  96   ........G.................................................T...............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7230   181  GTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.3% (283/291)  IGHV5-51*01  186  .......C...................A.C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  D  S  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_7230   271  CATGTATTACTGTGCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  97.3% (283/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------........A.....-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------.......AC.....T.............................  49

                                                   
                                        T  V  S  S 
                    Query_7230   361  CACCGTCTCCTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_4091

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           375     3e-106
IGHD3-3*01                                                                                            37.2    1e-06 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GCGGGTCAC	GTACTACGATTTTTGGAGTGCTTAT	CCCCCGAGCTCGGG	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGCGGGTCACGTACTACGATTTTTGGAGTGCTTATCCCCCGAGCTCGGGCTATTATGGCATGGACGTC	AKERVTYYDFWSAYPPSSGYYGMDV	243	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7231   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.0% (245/250)  IGHV3-30*18  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  Y  K  Y  Y  T  G  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7231   91   AGTGGGTGGCAGTTATTTCATATGATGGAAGTTATAAATACTATACAGGCTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAATTCCA  180
V  98.0% (245/250)  IGHV3-30*18  137  ................A...............A...........G...A...............A.........................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  E  R  V  T  Y  Y  D  
                    Query_7231   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGAGCGGGTCACGTACTACGATT  270
V  98.0% (245/250)  IGHV3-30*18  227  ......................................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.0% (23/25)    IGHD3-3*01   1    -------------------------------------------------------------------------------...T.......  11

                                      -----CDR3-IMGT-------------------------------->                                 
                                      F  W  S  A  Y  P  P  S  S  G  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7231   271  TTTGGAGTGCTTATCCCCCGAGCTCGGGCTATTATGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  350
D  92.0% (23/25)    IGHD3-3*01   12   .........G....------------------------------------------------------------------  25
J  94.2% (49/52)    IGHJ6*02     11   ----------------------------...C..C..T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_243923

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           305     3e-85
IGHD2-8*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	N/A	GATATTGTACCAGTGGT	CCATGCCCCGCCTTGGGTA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TTGACAGGATATTGTACCAGTGGTCCATGCCCCGCCTTGGGTAAC	LTGYCTSGPCPALGN	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	249	7	4	3	0	57.1
Total	N/A	N/A	249	222	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  T  N  Y  V  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7232   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTACCAACTATGTCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.2% (222/249)  IGHV3-23*01  47   ....................................C.....G..G.....C.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  E  T  G  G  V  T  V  Y  A  D  S  V  K  G  R  V  T  I  S  R  D  N  P  
                    Query_7232   91   AGTGGGTCTCAGTCATTAGTGAGACTGGTGGTGTCACAGTCTACGCGGATTCCGTGAAGGGCCGGGTCACCATCTCCAGAGACAATCCCA  180
V  89.2% (222/249)  IGHV3-23*01  137  ............CT.......GT.G.......AG....TA......A..C...............T....................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  V  F  L  Q  L  N  S  L  R  D  E  D  T  A  V  Y  Y  C  L  T  G  Y  C  T  S  G  P  
                    Query_7232   181  AGAACACGGTGTTTTTGCAATTGAACAGCCTGAGAGACGAGGACACGGCCGTTTATTACTGTTTGACAGGATATTGTACCAGTGGTCCAT  270
V  89.2% (222/249)  IGHV3-23*01  227  ........C...A.C.....A...............C...............A.........GC..A..---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.2% (15/17)    IGHD2-8*01   3    ---------------------------------------------------------------------..........T.A....----  19

                                      ---------------->                                  
                                      C  P  A  L  G  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7232   271  GCCCCGCCTTGGGTAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (36/36)   IGHJ4*02     13   ---------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_243922

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           258     4e-71
IGHD2-15*01                                                                                           10.3    119  
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	ACATAATCCT	GCTGC	CAGAGGGGC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGACATAATCCTGCTGCCAGAGGGGCCAACTGGTTCGACCTC	ARGHNPAARGANWFDL	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	48	24	19	2	3	79.2
FR2-IMGT	49	99	51	45	6	0	88.2
CDR2-IMGT	100	120	21	18	3	0	85.7
FR3-IMGT	121	234	114	94	20	0	82.5
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	245	207	35	3	84.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  D  F  Y  G  G  S  F     D  S  Y  W  N  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_7233   1    ACCCTGTCCCTCACCTGCGATTTTTATGGTGGGTCCTT---TGATTCCTACTGGAATTGGATCCGCCAGACTCCAGGGAAGGGGCTGGAG  87
V  84.5% (207/245)  IGHV4-34*01  49   ...................C.G.C..............CAG..G..A........GC............C.C..................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  N  R  A  G  S  T  N  F  N  P  S  L  E  S  R  L  T  I  S  V  D  T  S  T  K 
                    Query_7233   88   TGGATTGCAGAAATCAATCGTGCTGGAAGCACCAACTTCAATCCGTCCCTCGAGAGTCGACTCACCATTTCAGTGGACACGTCCACGAAG  177
V  84.5% (207/245)  IGHV4-34*01  139  .......GG..........A.AG..............A...C.........A........G.......A.....A..........A...C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       R  F  S  L  R  L  N  S  L  N  A  A  D  T  G  V  Y  Y  C  A  R  G  H  N  P  A  A  R  G  A 
                    Query_7233   178  CGATTCTCCCTAAGGCTAAATTCTCTTAACGCCGCAGACACGGGTGTGTATTACTGTGCGCGAGGACATAATCCTGCTGCCAGAGGGGCC  267
V  84.5% (207/245)  IGHV4-34*01  229  .AG........G.A...G.GC...G.G.C......G.......C................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (5/5)     IGHD2-15*01  21   ---------------------------------------------------------------------------.....----------  25
J  96.0% (48/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  D  L  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_7233   268  AACTGGTTCGACCTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  316
J  96.0% (48/50)    IGHJ5*02     3    .............C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_243921

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         288     5e-80
IGHD3-9*01                                                                                            14.1    8.6  
IGHJ2*01                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-9*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGACCGATAC	TGACTGG	GGTGGTCACACAGGGCTCTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACCGATACTGACTGGGGTGGTCACACAGGGCTCTTCTGGTACTTCGATCTC	RRPILTGVVTQGSSGTSIS	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	26	27	24	2	1	88.9
CDR1-IMGT	27	53	27	24	3	0	88.9
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	14	7	0	66.7
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	243	4	4	0	0	100
Total	N/A	N/A	244	216	27	1	88.5


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S   P  P  A  L  C  L  V  T  P  S  T  M  V  T  T  G  A  G  S  G  S  P  Q  E  R  G  W
                    Query_7234     1    ACCCTGTCCC-CACCTGCGTTGTGTCTGGTTACTCCATCGACAATGGTTACTACTGGGGCTGGCTCCGGCAGCCCCCAGGAAAGGGGCTG  89
V  88.5% (216/244)  IGHV4-38-2*01  49   ..........T........C...C...............AG..G...................A................G.........  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                          S  G  L  G  V  S  I  I  A  G  T  R  T  T  I  R  P  S  R  V  E  S  P  S  Q  W  T  R  P  V
                    Query_7234     90   GAGTGGATTGGGAGTGTCTATCATCGCGGGGACGCGTACTACAATCCGTCCCTCAAGAGTCGAGTCACCGTCTCAATGGACACGTCCAGT  179
V  88.5% (216/244)  IGHV4-38-2*01  139  ...............A........A.T...AG.A.C........C........................A.A...G.A..........AG  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                          I  R  S  P  *  A  *  G  L  *  P  P  Q  T  R  P  C  I  S  V  R  R  P  I  L  T  G  V  V  T
                    Query_7234     180  AATCAGGTCTCCCTGAGCCTGAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAAGACCGATACTGACTGGGGTGGTCAC  269
V  88.5% (216/244)  IGHV4-38-2*01  229  ..C...T.........AG.....C...............................A........--------------------------  292
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-9*01     15   --------------------------------------------------------------------------.......---------  21

                                        MGT----------------------->                                  
                                          Q  G  S  S  G  T  S  I  S  G  A  V  A  P  W  S  L  S  P  Q 
                    Query_7234     270  ACAGGGCTCTTCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  330
J  100.0% (50/50)   IGHJ2*01       4    -----------..................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_243927

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           419     2e-119
IGHD3-16*01                                                                                           12.2    36    
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGA	AATTGGTAACACCTAATTGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTC	ARRGKLVTPNWDYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	278	10	0	96.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_7235   2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAC  91
V  96.5% (278/288)  IGHV1-18*04  7    ...................C.................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  C  Y  N  G  N  T  K  Y  A  L 
                    Query_7235   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGTTGTTACAATGGTAACACAAAGTATGCACTG  181
V  96.5% (278/288)  IGHV1-18*04  97   ...........................................................CGC..................C.......A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  H  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_7235   182  AAGCACCAGGGCAGAGTCACCATGACCACAGACACATCGACGAGCACAGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.5% (278/288)  IGHV1-18*04  187  ....T.................................C..............C....................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------CDR3-IMGT-------------------->                           
                                       V  Y  Y  C  A  R  R  G  K  L  V  T  P  N  W  D  Y  G  M  D  V  W  G  Q  G  T  T  V  P  V 
                    Query_7235   272  GTGTATTACTGTGCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCCCCGTC  361
V  96.5% (278/288)  IGHV1-18*04  277  ..................------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD3-16*01  18   -------------------......-----------------------------------------------------------------  23
J  98.0% (49/50)    IGHJ6*02     13   ----------------------------------------------......................................A.....  56

                                            
                                       S  S 
                    Query_7235   362  TCCTCA  367
J  98.0% (49/50)    IGHJ6*02     57   ......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_243926

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           318     5e-89
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_7236   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_7236   91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.4% (224/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_7236   181  CAATTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.4% (224/245)  IGHV4-59*02  229  ..G........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_7236   271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_4098

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           341     5e-96
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGTTGGGCAA	CAGTGGCTGGTAC	GGAGT	CTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGTTGGGCAACAGTGGCTGGTACGGAGTCTTTAACTTC	ARDGLGNSGWYGVFNF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_7237   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTTTAATATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-30*04  47   ................................................A.GC...................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      G  W  L  A  V  I  S  Y  D  G  S  N  G  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7237   91   GGTGGTTGGCAGTTATATCATATGATGGAAGTAATGGACACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-30*04  137  A....G.............................AA.T...................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  G  T  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  R  D  G  L  G  N  S  G  
                    Query_7237   181  AGGGCACCCTGTATCTGGAAATGAACAGTCTGAGAGTTGAGGACACGGCTGTGTATTTCTGTGCGAGAGATGGGTTGGGCAACAGTGGCT  270
V  93.6% (234/250)  IGHV3-30*04  227  ..AA...G.........C..........C.......C....................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD6-19*01  9    ----------------------------------------------------------------------------------........  16

                                      T------------------>                                  
                                      W  Y  G  V  F  N  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7237   271  GGTACGGAGTCTTTAACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (13/13)   IGHD6-19*01  17   .....-------------------------------------------------  21
J  95.5% (42/44)    IGHJ4*02     5    ----------....G...A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_243924

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           316     2e-88
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AATGCCA	TTCGGGG	G	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGAAATGCCATTCGGGGGTGCCTTTGATATA	VKEMPFGGAFDI	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  V  F  D  S  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7238   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCGTCTTCGATAGCTATTCTATGCATTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.4% (226/250)  IGHV3-64*05  47   ...................................AC....AG.......G.......C...............................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  V  I  S  S  N  G  E  S  T  F  Y  A  D  S  V  T  G  R  F  T  M  S  R  D  N  S  
                    Query_7238   91   AATTTGTATCAGTTATTAGTAGTAATGGAGAGAGTACATTTTACGCAGACTCAGTGACGGGCAGATTCACCATGTCCAGAGACAATTCCA  180
V  90.4% (226/250)  IGHV3-64*05  137  ...A...T....C...............G.GT..C....AC................A...............C................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  K  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  E  M  P  F  G  G  A  
                    Query_7238   181  AGAACAAACTGTATCTTCAAATGAGCAGTCTGAGACCTGAAGACACCGCTGTGTATTATTGTGTGAAAGAAATGCCATTCGGGGGTGCCT  270
V  90.4% (226/250)  IGHV3-64*05  227  ......CG......G....................G....G.....G...........C...........--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (7/7)     IGHD3-10*01  13   -----------------------------------------------------------------------------.......------  19
J  95.7% (45/47)    IGHJ3*02     4    -------------------------------------------------------------------------------------...T.  8

                                      ------->                                  
                                      F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7238   271  TTGATATATGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  312
J  95.7% (45/47)    IGHJ3*02     9    .......C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_42744

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           321     6e-90
IGHD4-17*01                                                                                           21.8    0.040
IGHJ5*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGAACA	ACTACGGTGAC	CCCCACTTT	GACCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGAACAACTACGGTGACCCCCACTTTGACCCC	ARWNNYGDPHFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  I  N  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7239   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCATTAATTACTCCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.2% (224/243)  IGHV4-59*01  49   ........................................G..G.....A........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  H  H  S  G  S  T  D  Y  D  P  S  L  K  G  R  V  I  I  S  T  Y  T  P  K  N 
                    Query_7239   91   TGGATTGGGTATTTCCACCACAGTGGGAGCACCGACTACGACCCCTCCCTCAAGGGTCGAGTCATCATATCAACATACACGCCCAAGAAC  180
V  92.2% (224/243)  IGHV4-59*01  139  ............A..T.TT..............A.....A..............A.........C.......GT.G.....T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  H  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  W  N  N  Y  G  D  P  H  F 
                    Query_7239   181  CAGTTTTCCCTGAAGCTGCACTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGATGGAACAACTACGGTGACCCCCACTTT  270
V  92.2% (224/243)  IGHV4-59*01  229  .....C............AG.................................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (11/11)   IGHD4-17*01  3    ----------------------------------------------------------------------...........---------  13

                                      ----->                                  
                                       D  P  W  G  Q  G  A  L  V  V  V  S  S  
                    Query_7239   271  GACCCCTGGGGCCAGGGAGCCCTGGTCGTCGTCTCCTCAG  310
J  92.5% (37/40)    IGHJ5*02     12   ..................A........AC...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_216563

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           313     2e-87
IGHD4-17*01                                                                                           19.9    0.17 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGCGGCAC	TGACTACATTGACTAC	GGGGAGGCCGCTCCACGGGAGGTG	GGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGACGGCGGCACTGACTACATTGACTACGGGGAGGCCGCTCCACGGGAGGTGGGTCTGGACGTC	VRDGGTDYIDYGEAAPREVGLDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  G  Y  A  I  H  W  V  R  R  A  P  G  K  G  L  
                    Query_7240   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAATGGCTATGCCATACACTGGGTCCGCCGGGCTCCAGGCAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-33*01  47   ..........................................G.A......G...G.............A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  V  D  G  K  N  Q  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_7240   91   AGTGGGTGGCCATTATTTGGGTTGATGGAAAGAATCAAAACTATGCTGACTCCGTGAAGGGCCGATTCACCGTTTCCAGAGACAATTCCA  180
V  90.0% (225/250)  IGHV3-33*01  137  ..........AG....A...TA........GT...A..T.......A........................A.C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  V  Y  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  V  R  D  G  G  T  D  Y  I  
                    Query_7240   181  AGAACACAGTGTATTTGCAAATGAACAGCCTGACGGCCGAAGACACGGCTGTCTATTACTGTGTGAGAGACGGCGGCACTGACTACATTG  270
V  90.0% (225/250)  IGHV3-33*01  227  .......GC.....C..................GA.....G...........G..........C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD4-17*01  1    -------------------------------------------------------------------------------.......GG..  11

                                      --CDR3-IMGT----------------------------->                                 
                                      D  Y  G  E  A  A  P  R  E  V  G  L  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_7240   271  ACTACGGGGAGGCCGCTCCACGGGAGGTGGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  344
D  87.5% (14/16)    IGHD4-17*01  12   .....---------------------------------------------------------------------  16
J  95.6% (43/45)    IGHJ6*02     18   -----------------------------...A..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_150445

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  R  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_7241   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACCGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG....T.....T........A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7241   91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.4% (228/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_7241   181  CAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  ...................G...........................G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_7241   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_216562

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           302     3e-84
IGHD5-12*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAGA	TGGCTACAATTAC	AGTCAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGATGGCTACAATTACAGTCAGGACTAC	ARLDGYNYSQDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	218	25	0	89.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  K  G  G  S  F  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_7242   1    ACCCTGTCCCTCACCTGCGCTGTCAAAGGTGGGTCCTTCAATCATTTCTACTGGAGTTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  89.7% (218/243)  IGHV4-34*01  49   ........................T.T.............G.GG..A.........C............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  K  Y  N  P  S  L  E  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_7242   91   TGGATTGGCGAAATCAATCACAGTGGACGCACCAAGTACAACCCGTCCCTCGAGAGTCGAGTCACCATCTCATTGGACACCTCCAAAAAC  180
V  89.7% (218/243)  IGHV4-34*01  139  ........G...........T......A.......C...............A................A...G.A.....G.....G...  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  K  L  K  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  D  G  Y  N  Y  S  Q  D 
                    Query_7242   181  CACTTCTCCCTGAAACTGAAGTCTGTCACCGCCGCGGACACGGCTCTTTATTACTGTGCGAGACTAGATGGCTACAATTACAGTCAGGAC  270
V  89.7% (218/243)  IGHV4-34*01  229  ..G...........G....GC.....G..................G.G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.3% (12/13)    IGHD5-12*01  11   --------------------------------------------------------------------.......G.....---------  23
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       Y  W  G  K  G  T  L  V  T  V  S  S  
                    Query_7242   271  TACTGGGGCAAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   .........C...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_150444

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD1-1*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GGGAGGGGG	CAACTGG	GAACCCTTTAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTAC	ARGGGNWEPFTY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	288	267	21	0	92.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  Y
                    Query_7243   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCTA  90
V  92.7% (267/288)  IGHV5-51*01  6    .................................................................G............C......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  L  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  I  V  F  P  D  D  S  D  T  R  Y  S  P
                    Query_7243   91   CTGGCTCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGATCGTTTTTCCTGATGACTCTGATACCAGATACAGCCC  180
V  92.7% (267/288)  IGHV5-51*01  96   ....A.............C..G.........A..........G............A.C.A.....G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  I  T  I  S  A  D  K  S  I  T  T  A  F  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_7243   181  GTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCACCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACACCGC  270
V  92.7% (267/288)  IGHV5-51*01  186  .......C.......GG...........................G........A...........G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  G  N  W  E  P  F  T  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7243   271  CATCTATTACTGTGCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.7% (267/288)  IGHV5-51*01  276  ...G...........G..-----------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------.......-------------------------------------------------  11
J  100.0% (38/38)   IGHJ4*02     11   ---------------------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_330236

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           367     6e-104
IGHD5-12*01                                                                                           23.8    0.011 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCTGCTATCGGATACTTT	GTGGCTACGATT	CGGGTGAGGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTGCTATCGGATACTTTGTGGCTACGATTCGGGTGAGGGCATGGACGTC	ARLCYRILCGYDSGEGMDV	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	26	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  S  L  T  C  T  V  S  G  A  S  I  R  S  T  N  F  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_7244   2    CCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGGAGTACTAATTTCTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  91
V  97.2% (242/249)  IGHV4-39*01  50   ..............................G.........C....G..G..A......................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_7244   92   TGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCA  181
V  97.2% (242/249)  IGHV4-39*01  140  ..........................................................................................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  D  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  C  Y  R  I  L  C  
                    Query_7244   182  AGGACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACTCTGCTATCGGATACTTTGTG  271
V  97.2% (242/249)  IGHV4-39*01  230  ..A.....................G............................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD5-12*01  10   ---------------------------------------------------------------------------------------...  12

                                      -IMGT----------------------->                                 
                                      G  Y  D  S  G  E  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7244   272  GCTACGATTCGGGTGAGGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
D  100.0% (12/12)   IGHD5-12*01  13   .........-----------------------------------------------------  21
J  100.0% (42/42)   IGHJ6*02     21   --------------------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_330237

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-3*01                                                                                            16.1    2.3  
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGGGAGGCGG	TTACGATT	CTATCCTCGGT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGGAGGCGGTTACGATTCTATCCTCGGTCTACGACTACGCTATGGACGTC	ASGEAVTILSSVYDYAMDV	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  F  Y  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_7245   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ...........................................G..A................................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  Y  Y  S  G  R  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  A  S  K  N 
                    Query_7245   91   TGGATTGGGTCTATTTATTACAGTGGGAGGACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCGTATCAGTTGACGCGTCCAAGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ..........A...C..............C....................................A.......A...A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  G  E  A  V  T  I  L  S  S 
                    Query_7245   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGCGGGGAGGCGGTTACGATTCTATCCTCG  270
V  95.5% (231/242)  IGHV4-59*01  229  ...................G.................................C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (8/8)     IGHD3-3*01   4    -------------------------------------------------------------------------........---------  11

                                      ----------------------->                                 
                                       V  Y  D  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7245   271  GTCTACGACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  327
J  96.4% (53/55)    IGHJ6*02     8    --....T......G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_330234

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            341     5e-96
IGHD3-3*01                                                                                            12.2    32   
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ACCCGTGTGATGCC	TACCATCTTTGG	TG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACCCGTGTGATGCCTACCATCTTTGGTGACTACGGTATGGACGTC	ARTRVMPTIFGDYGMDV	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  D  S  I  T  S  S  H  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_7246  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCATCACCAGTAGTCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  94.3% (232/246)  IGHV4-4*01  49   ...............................G........G.......A.........................................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  R  T  R  V  T  I  S  I  D  K  S  K 
                    Query_7246  91   GAGTGGATTGGGGAAATCTATTATAGTGGGACCACGAACTACAATCCGTCCCTCAGGACTCGAGTCACCATATCAATAGACAAGTCCAAG  180
V  94.3% (232/246)  IGHV4-4*01  139  .....................C.........G...C........C..........A..G................G..............  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  T  R  V  M  P  T  I  F 
                    Query_7246  181  AATCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTTCTGTGCCAGAACCCGTGTGATGCCTACCATCTTT  270
V  94.3% (232/246)  IGHV4-4*01  229  ..C...............................................G....G......G...------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD3-3*01  5    --------------------------------------------------------------------------------...G..T...  14

                                     -------------------->                                 
                                      G  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7246  271  GGTGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
D  83.3% (10/12)    IGHD3-3*01  15   ..----------------------------------------------------  16
J  100.0% (50/50)   IGHJ6*02    13   ----..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_330235

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           382     3e-108
IGHD2-15*01                                                                                           10.3    125   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCTAGAAATCCAGTTCGCCGGACTATC	ACTCC	ACGGTCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCTAGAAATCCAGTTCGCCGGACTATCACTCCACGGTCATTTTGACTAC	ARALEIQFAGLSLHGHFDY	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_7247   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (247/250)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7247   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (247/250)  IGHV4-31*03  139  ..........................................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  A  L  E  I  Q  F  A 
                    Query_7247   181  AAGAACCAATTCTCCCTGAAACTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGCCCTAGAAATCCAGTTCGCC  270
V  98.8% (247/250)  IGHV4-31*03  229  ........G...........G.....................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       G  L  S  L  H  G  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7247   271  GGACTATCACTCCACGGTCATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  100.0% (5/5)     IGHD2-15*01  27   --------.....---------------------------------------------------  31
J  100.0% (43/43)   IGHJ4*02     6    ---------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_330232

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD5-18*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAC	N/A	GTGGACACACCTATGG	AGCCCGAACCGACCCCCATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACGTGGACACACCTATGGAGCCCGAACCGACCCCCATCTTGACTAC	AGRGHTYGARTDPHLDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  I  F  R  T  Y
                    Query_7248   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACATCTTTAGAACCTA  90
V  94.5% (274/290)  IGHV5-51*01  6    ....................C.............................A..........................G.....CC.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_7248   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  94.5% (274/290)  IGHV5-51*01  96   ........G.................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  *  A  D  H  S  I  S  T  A  Y  L  Q  W  S  S  R  K  A  P  D  P  A
                    Query_7248   181  GTCCTTCCAAGGCCAGGTCACCATCTAAGCCGACCACTCCATTAGCACCGCCTACCTGCAGTGGAGCAGCCGGAAGGCCCCGGACCCCGC  270
V  94.5% (274/290)  IGHV5-51*01  186  ..........................C.......A.G.....C............................T.......T.....A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  A  G  R  G  H  T  Y  G  A  R  T  D  P  H  L  D  Y  W  G  Q  G  T  L  V  S  V
                    Query_7248   271  CATATATTACTGTGCGGGACGTGGACACACCTATGGAGCCCGAACCGACCCCCATCTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGT  360
V  94.5% (274/290)  IGHV5-51*01  276  ...G............A...----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  87.5% (14/16)    IGHD5-18*01  1    --------------------.....T...G......------------------------------------------------------  16
J  97.6% (41/42)    IGHJ4*02     7    --------------------------------------------------------.............................A....  40

                                              
                                        S  S  
                    Query_7248   361  CTCCTCAG  368
J  97.6% (41/42)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_42741

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           405     4e-115
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGCA	TATTACTATGATAGTAGT	ATTTATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGCATATTACTATGATAGTAGTATTTATCTTGACTAC	ARAAYYYDSSIYLDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  R  T  S  R  D  S  F  T  N  H 
                    Query_7249   2    CAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCTGGGGCCTCGGTGAAGGTCTCCTGCAGGACTTCTCGTGACTCCTTTACCAACCAT  91
V  94.8% (274/289)  IGHV1-18*01  7    ....................T.......................A................A.G.....G..T..A.........G.T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  N  T  N  Y  A  Q 
                    Query_7249   92   GGATTTAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAAACTATGCACAG  181
V  94.8% (274/289)  IGHV1-18*01  97   ..TA.C......................................................G.............................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_7249   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (274/289)  IGHV1-18*01  187  ...C......................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  A  A  Y  Y  Y  D  S  S  I  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_7249   272  GTTTATTACTGTGCGAGAGCCGCATATTACTATGATAGTAGTATTTATCTTGACTACTGGGGCCAGGGAACCCTCGTCACCGTCTCCTCA  361
V  94.8% (274/289)  IGHV1-18*01  277  ..G................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (18/18)   IGHD3-22*01  2    ------------------------..................------------------------------------------------  19
J  97.6% (41/42)    IGHJ4*02     7    -------------------------------------------------.........................G...............  47

                                       
                                       
                    Query_7249   362  G  362
J  97.6% (41/42)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_330230

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CGAAACGTATTACCTTGAAA	ATGCTTAT	TATCCCCCCCCGG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACGAAACGTATTACCTTGAAAATGCTTATTATCCCCCCCCGGACTTCGACTAC	AKDETYYLENAYYPPPDFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7250   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCGACTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   ............................................AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  G  A  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_7250   91   AGTGGGTCTCAACTATTAGTGGTAGTGGTGCAAAGACATACTATGCAGACTCCGTGAAGGGCCGATTTACCATCTCCAGAGACGATTCCA  180
V  92.8% (232/250)  IGHV3-23*01  137  ...........G..................GT.GC........C....................G..C...............A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  F  Y  L  E  M  N  S  L  R  A  E  D  T  V  V  Y  Y  C  A  K  D  E  T  Y  Y  L  E  
                    Query_7250   181  AGAACACATTTTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGTCGTATATTATTGTGCGAAAGACGAAACGTATTACCTTGAAA  270
V  92.8% (232/250)  IGHV3-23*01  227  .......GC.G......C..............................C.........C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      R3-IMGT------------------------>                                  
                                      N  A  Y  Y  P  P  P  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7250   271  ATGCTTATTATCCCCCCCCGGACTTCGACTACTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  336
D  100.0% (8/8)     IGHD3-16*01  27   ........----------------------------------------------------------  34
J  95.6% (43/45)    IGHJ4*02     4    ---------------------....T.......................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_42740

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           343     2e-96
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              48.8    7e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CCTCTATGCCGG	GTGGCTGG	GTCGCTG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCCTCTATGCCGGGTGGCTGGGTCGCTGTTGACTCT	AKASMPGGWVAVDS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7251   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-30*18  47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  S  D  G  S  N  K  Y  Y  G  D  P  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7251   91   AGTGGGTAGCAGTCATATCATCTGACGGAAGTAATAAATACTATGGAGACCCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (234/249)  IGHV3-30*18  137  .......G.....T.......A...T...................C....T.......................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  T  T  L  Y  L  Q  M  N  S  L  R  P  D  D  T  A  A  Y  Y  C  A  K  A  S  M  P  G  G  W  
                    Query_7251   181  AGACCACCCTATATCTGCAGATGAACAGCCTGAGACCTGATGACACGGCTGCTTATTACTGTGCGAAAGCCTCTATGCCGGGTGGCTGGG  270
V  94.0% (234/249)  IGHV3-30*18  227  ...A...G..G........A...............G....G..........TG................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD6-19*01  11   ---------------------------------------------------------------------------------........-  18

                                      ------------->                                
                                      V  A  V  D  S  W  G  Q  G  I  L  V  I  V  S  S
                    Query_7251   271  TCGCTGTTGACTCTTGGGGCCAGGGAATCCTGGTCATTGTCTCCTC  316
J  87.5% (35/40)    IGHJ4*02     7    ------......AC.............C........CC........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_330238

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           341     5e-96
IGHD2-8*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGCGGGGGGTTTATCATGA	TAATGGTG	GCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGCGGGGGGTTTATCATGATAATGGTGGCCTTGACTTC	ARRRGVYHDNGGLDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  Y  Y  W  N  W  I  R  Q  T  P  G  K  G  P  E 
                    Query_7252   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTACTACTGGAACTGGATCCGACAGACCCCAGGGAAGGGACCTGAG  90
V  94.7% (231/244)  IGHV4-59*08  49   .......................................A...............G.........G...C...............TG...  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  R  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7252   91   TGGATTGGGTATATCTATTCCAGGGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAAC  180
V  94.7% (231/244)  IGHV4-59*08  139  ...................A...T..................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  N  L  L  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  R  G  V  Y  H  D  N  G 
                    Query_7252   181  CAGTTCTCCCTGAACCTGCTCTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGAGACGGCGGGGGGTTTATCATGATAATGGT  270
V  94.7% (231/244)  IGHV4-59*08  229  ..............G...AG.................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD2-8*01   13   -----------------------------------------------------------------------------------.......  19

                                      ----------->                                  
                                       G  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7252   271  GGCCTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTTTCCTCAG  316
D  100.0% (8/8)     IGHD2-8*01   20   .---------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    ----......A...........................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_330239

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           339     2e-95
IGHD2-8*02                                                                                            19.9    0.16 
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-8*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCGGGAC	TTGTACTGGT	TACACCTGCTACGACGCTC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCGGGACTTGTACTGGTTACACCTGCTACGACGCTCCTTTTGATATC	ARDPGTCTGYTCYDAPFDI	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  S  V  S  Y  N  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_7253   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTAGGTTCTCCGTCAGTTACAACTCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTG  90
V  93.9% (232/247)  IGHV3-53*01  47   .............................G.....A........AG.....A.....G..............................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  I  L  Y  S  G  G  Y  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  K  
                    Query_7253   91   AGTGGGTCTCAATTCTTTATAGTGGTGGTTATACATACTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.9% (232/247)  IGHV3-53*01  137  ...........G..A.......C......AGC......................A...................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------CDR3-IM
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  G  T  C  T  G  Y  
                    Query_7253   181  ACACCCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGATCCCGGGACTTGTACTGGTTACA  270
V  93.9% (232/247)  IGHV3-53*01  227  ....G..............................................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (10/10)   IGHD2-8*02   7    ----------------------------------------------------------------------------..........----  16

                                      GT----------------------->                                  
                                      T  C  Y  D  A  P  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7253   271  CCTGCTACGACGCTCCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCGTCAG  330
J  97.8% (44/45)    IGHJ3*02     6    ---------------........................................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_282508

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           389     2e-110
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ1*01                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGAGTGGCCAC	AGCAGCAGCTGGT	GGACAT	CTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGAGTGGCCACAGCAGCAGCTGGTGGACATCTGAGTACTTCCAGGAG	ARMSGHSSSWWTSEYFQE	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  P  S  H
                    Query_7254   1    GCAGCTGGTGCAGTCTGGAGCAGAGCTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTCCCCAGCCA  90
V  93.1% (269/289)  IGHV5-51*03  6    .........................G....A..................................................TA.....T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  T  P  G  K  G  L  E  W  M  G  L  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_7254   91   TTGGATCGGCTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGACTCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  93.1% (269/289)  IGHV5-51*03  96   C......................T...........................GA............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  K  G  Q  V  T  I  S  V  D  K  S  I  N  T  A  F  L  R  W  A  S  L  K  A  S  D  S  G
                    Query_7254   181  GTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAACACCGCCTTCCTGCGCTGGGCCAGCCTGAAGGCCTCGGACAGCGG  270
V  93.1% (269/289)  IGHV5-51*03  186  .......C.....................C..............G........A.....AG...AG....................C..C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  M  S  G  H  S  S  S  W  W  T  S  E  Y  F  Q  E  W  G  Q  G  T  L  V  S
                    Query_7254   271  CATGTATTACTGTGCGAGAATGAGTGGCCACAGCAGCAGCTGGTGGACATCTGAGTACTTCCAGGAGTGGGGCCAGGGCACCCTGGTCTC  360
V  93.1% (269/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (13/13)   IGHD6-13*01  7    -------------------------------.............----------------------------------------------  19
J  92.2% (47/51)    IGHJ1*01     2    --------------------------------------------------....A.........C.C.....................A.  41

                                                 
                                        V  S  S  
                    Query_7254   361  CGTCTCCTCAG  371
J  92.2% (47/51)    IGHJ1*01     42   ...........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_282509

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     2e-87
IGHD3-22*01                                                                                           16.1    2.4  
IGHJ3*01                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGAATGCGGGTGGATGACAGTAACAC	TTATTACT	CCTGGAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGAATGCGGGTGGATGACAGTAACACTTATTACTCCTGGAATGATGCTTTTGATGTC	AKDRMRVDDSNTYYSWNDAFDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  Y  A  M  S  W  V  R  Q  P  P  G  K  G  L  
                    Query_7255   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACTATGCCATGAGCTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGC  90
V  90.0% (225/250)  IGHV3-23*01  47   ..........................................G..G.........................G.................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  G  I  S  S  V  S  D  T  T  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7255   91   AGTGGGTCTCAGGTATTAGTAGTGTTAGCGATACCACAGCCTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCGA  180
V  90.0% (225/250)  IGHV3-23*01  137  ............C.......G..AG.G.T.G..G....TA...C..........................................T.C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  I  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  A  Y  F  C  A  K  D  R  M  R  V  D  D  
                    Query_7255   181  AGAATATATTGTATCTGCAAATGAATAGCCTGAGAGTCGAGGACACGGCCGCATATTTCTGTGCGAAAGATCGAATGCGGGTGGATGACA  270
V  90.0% (225/250)  IGHV3-23*01  227  ....C.CGC................C..........C..............T.....A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -CDR3-IMGT--------------------------->                                  
                                      S  N  T  Y  Y  S  W  N  D  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7255   271  GTAACACTTATTACTCCTGGAATGATGCTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  342
D  100.0% (8/8)     IGHD3-22*01  22   -------........---------------------------------------------------------  29
J  100.0% (50/50)   IGHJ3*01     1    ----------------------..................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_282503

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           257     1e-70
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCTCGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCTCGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNLDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	92	22	0	80.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	204	40	0	83.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_7256   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  83.6% (204/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  P  G  D  M  S  R  N 
                    Query_7256   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGCCAGGAGACATGTCTAGGAAT  180
V  83.6% (204/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.AT...T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_7256   181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACGTAT  270
V  83.6% (204/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  L  D  S  F  N  V  R  G  Q  G  T  P  V  T  V  S  S  
                    Query_7256   271  GTTTGGGGGAGTTTTCGCCGCAATCTCGATAGCTTTAATGTCCGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  90.7% (39/43)    IGHJ3*01     8    ---------------------------------...G.....T..............AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_282500

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           282     4e-78
IGHD3-16*01                                                                                           18.0    0.60 
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACAACG	TATGCTTAT	GTCAGTGCTTGGGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAACGTATGCTTATGTCAGTGCTTGGGGATGATGCTTTTGATGTC	ARRQRMLMSVLGDDAFDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  V  T  T  T  R  Y  S  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_7257   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCGTCACCACTACTAGATACTCCTGGGGTTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  86.0% (215/250)  IGHV4-39*01  49   ...............................G....A...G..G..G...T....A......C..........................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Q  M  F  Y  G  G  S  T  Y  Q  N  P  S  L  N  S  R  V  T  V  S  V  D  P  S 
                    Query_7257   91   CTGGAATGGATTGGGCAGATGTTCTATGGTGGGAGCACGTACCAGAACCCGTCGCTGAATAGTCGAGTCACCGTGTCCGTTGACCCGTCC  180
V  86.0% (215/250)  IGHV4-39*01  139  .....G.........AGT..C.AT...A..........C...T.C........C..C..G............A.A.....A...A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  S  Q  F  F  L  N  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  R  Q  R  M  L  M  S 
                    Query_7257   181  AAGAGTCAGTTCTTCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCTGTATATTATTGTGCGAGACGACAACGTATGCTTATGTCA  270
V  86.0% (215/250)  IGHV4-39*01  229  ....AC.......C......G....G...................A.......G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  26   -----------------------------------------------------------------------------.........----  34

                                      -IMGT--------------------->                                  
                                       V  L  G  D  D  A  F  D  V  W  G  Q  G  T  G  V  T  V  S  S  
                    Query_7257   271  GTGCTTGGGGATGATGCTTTTGATGTCTGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  331
J  96.0% (48/50)    IGHJ3*01     1    -----------...............................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_282506

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         396     2e-112
IGHD2-21*02                                                                                           19.9    0.17  
IGHJ4*02                                                                                              50.7    2e-10 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ATCGAGTCGAC	TGTGGCGGTGACT	ACTCTCCCCGACGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAATCGAGTCGACTGTGGCGGTGACTACTCTCCCCGACGGC	ARIESTVAVTTLPDG	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	271	18	0	93.8


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  L  G  S  G  Y  N  F  T  N  Y
                    Query_7258     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTTTGGGGTCTGGATACAACTTTACCAACTA  90
V  93.8% (271/289)  IGHV5-10-1*01  6    .............................................................AA...T..........G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  N  W  V  R  Q  I  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  F  Y  T  N  Y  S  P
                    Query_7258     91   CTGGATCAATTGGGTGCGCCAGATTCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTTTTACACCAACTACAGTCC  180
V  93.8% (271/289)  IGHV5-10-1*01  96   ........GC..............G..............................................C...T...........C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  S  S  L  R  A  S  D  T  A
                    Query_7258     181  GTCCTTCCAAGGCCACGTCACCATTTCAGCTGACACGTCCATCAGCACTGCCTACCTCCAGTGGAGCAGCCTGAGGGCTTCGGACACCGC  270
V  93.8% (271/289)  IGHV5-10-1*01  186  ........................C..........A.....................G................A...C...........  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          I  Y  Y  C  A  R  I  E  S  T  V  A  V  T  T  L  P  D  G  W  G  Q  G  T  M  V  L  V  S  S
                    Query_7258     271  CATATATTACTGTGCGCGAATCGAGTCGACTGTGGCGGTGACTACTCTCCCCGACGGCTGGGGCCAGGGAACCATGGTCCTCGTCTCCTC  360
V  93.8% (271/289)  IGHV5-10-1*01  276  ...G............A..-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  92.3% (12/13)    IGHD2-21*02    8    ------------------------------.....T.......-----------------------------------------------  20
J  91.4% (32/35)    IGHJ4*02       14   ---------------------------------------------------------................C.....AC.........  46

                                          
                                          
                    Query_7258     361  AG  362
J  91.4% (32/35)    IGHJ4*02       47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_282507

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_7259   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_7259   91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_7259   181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_7259   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_282505

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           327     9e-92
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAAG	AGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQEWLPGDWYFDL	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  R  N  Y  W  S  W  I  R  Q  P  P  G  E  R  L  E 
                    Query_7260   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCACTAGAAACTACTGGAGCTGGATTCGGCAGCCCCCAGGGGAGAGACTGGAG  90
V  93.0% (226/243)  IGHV4-59*08  49   ...................C...........G........G...TT................C...............A..G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_7260   91   TGGATAGCGTATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  93.0% (226/243)  IGHV4-59*08  139  .....T.G.......T...........AG...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  F  L  P  A  V  Q  E  W  L 
                    Query_7260   181  CAGTTCTCCCTGAAGATGACCTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTG  270
V  93.0% (226/243)  IGHV4-59*08  229  ...............C...G.........................G.................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  10   ----------------------------------------------------------------------------------........  17

                                      ----------------------->                                  
                                       P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_7260   271  CCAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCGTCAG  328
J  96.1% (49/51)    IGHJ2*01     3    -------......................................A.......C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_86581

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           357     1e-100
IGHD6-13*01                                                                                           21.8    0.041 
IGHJ3*01                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  L  S  G  G  S  I  S  S  G  G  F  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_7261   1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGGCTCCATCAGCAGTGGTGGTTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.6% (239/250)  IGHV4-31*03  49   .....................G..............................A........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_7261   91   CTGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCT  180
V  95.6% (239/250)  IGHV4-31*03  139  .....................T..................A.................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V 
                    Query_7261   181  AAGAACCAATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTA  270
V  95.6% (239/250)  IGHV4-31*03  229  ........G..........A.....GC...............................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD6-13*01  11   ------------------------------------------------------------------------...........-------  21

                                      ----------------->                                  
                                       G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7261   271  GGCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  98.0% (48/49)    IGHJ3*01     2    ---.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_87238

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCCACGGGCTC	AGCAGTGGC	GATGACTCTGTTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCCACGGGCTCAGCAGTGGCGATGACTCTGTTTATGACTAC	VVHGLSSGDDSVYDY	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	241	1	1	0	0	100
Total	N/A	N/A	241	218	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  R  V  S  G  G  S  I  S  D  S  H  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_7262   1    ACCCTGTCCCTCACCTGCCGTGTCTCTGGTGGCTCCATCAGCGACAGTCACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.5% (218/241)  IGHV4-4*02   49   ..................GC......................AGT...A.........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  F  H  S  G  S  A  K  Y  N  P  S  L  Q  S  R  L  T  M  S  L  D  K  S  R 
                    Query_7262   91   GAGTGGATTGGGGAAGTTTTTCACAGTGGGAGCGCCAAGTACAACCCGTCCCTTCAGAGTCGACTCACCATGTCACTAGACAAGTCTAGG  180
V  90.5% (218/241)  IGHV4-4*02   139  ...............A.C.A...T.........A....C..............CA........G.......A...G..........C.A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  K  L  Q  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  H  G  L  S  S  G  D  D 
                    Query_7262   181  AACCAGTTCTCCCTGAAGCTGCAGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGTGGTCCACGGGCTCAGCAGTGGCGATGAC  270
V  90.5% (218/241)  IGHV4-4*02   229  .....................AGC.....................................-----------------------------  289
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  100.0% (9/9)     IGHD6-19*01  7    ---------------------------------------------------------------------------.........------  15

                                      -------------->                                  
                                       S  V  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7262   271  TCTGTTTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (41/41)   IGHJ4*02     8    --------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_86583

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            276     3e-76
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	96	18	0	84.2
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	211	35	0	85.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_7263   1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  85.8% (211/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  S  M  S  V  D  K  S  K 
                    Query_7263   91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCAGCATGTCAGTAGACAAGTCCAAG  180
V  85.8% (211/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A............C...A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  N  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_7263   181  AATCAATTCTCCCTCACGCTGACGTCTCTGAACGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  85.8% (211/246)  IGHV4-4*01   229  ..C..G........G.A.....GC...G...C..................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  A  T  V  S  S  
                    Query_7263   271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGCCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  88.4% (38/43)    IGHJ4*02     6    ---.....C.A.............AC.....T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_86582

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     1e-95
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7264   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_7264   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  S  L  R  S  V  T  A  A  D  T  A  V  H  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_7264   181  CAGTTCTCCGTGAGCCTGAGATCTGTGACCGCTGCGGACACGGCCGTACATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  94.3% (231/245)  IGHV4-59*01  229  .........C...AG.....C..........................GT..........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_7264   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_86585

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           433     1e-123
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	112	2	0	98.2
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	285	8	0	97.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_7265   2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCA  91
V  97.3% (285/293)  IGHV5-51*03  2    ....G.....G.......................................................................C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  F  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_7265   92   ACTTCTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACA  181
V  97.3% (285/293)  IGHV5-51*03  92   G..A...................................................G............................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  A  
                    Query_7265   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGCCA  271
V  97.3% (285/293)  IGHV5-51*03  182  .......................................................................................A..  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7265   272  CCGCCATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  97.3% (285/293)  IGHV5-51*03  272  .......................----------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    ------------------------......C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_86587

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            361     4e-102
IGHD6-25*01                                                                                           14.1    8.6   
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	GGGCTCAGTTTTTTCGA	CGGCTAC	CC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAAAGATGGGCTCAGTTTTTTCGACGGCTACCCCTACGGTATGGACGTC	TKDGLSFFDGYPYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	251	9	8	1	0	88.9
Total	N/A	N/A	251	241	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  D  D  Y  A  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_7266   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGTTCCAGGGAAGGGCCTGG  90
V  96.0% (241/251)  IGHV3-9*01   47   ....................................C...................................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  T  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7266   91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGGTACCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (241/251)  IGHV3-9*01   137  .................................G........................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  T  A  L  H  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  F  C  T  K  D  G  L  S  F  F  D  
                    Query_7266   181  AGACCGCCCTTCATCTGCAAATGAACAGTCTGAGACCTGAGGACACGGCCTTGTATTTCTGTACAAAAGATGGGCTCAGTTTTTTCGACG  270
V  96.0% (241/251)  IGHV3-9*01   227  ...A.T....GT.......................G.....................A....G........-------------------  297
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (7/7)     IGHD6-25*01  12   ----------------------------------------------------------------------------------------..  13

                                      GT-------------------->                              
                                      G  Y  P  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_7266   271  GCTACCCCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  323
D  100.0% (7/7)     IGHD6-25*01  14   .....------------------------------------------------  18
J  100.0% (46/46)   IGHJ6*02     14   -------..............................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_90089

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_7267   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_7267   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_7267   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  P  V  S  S  
                    Query_7267   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGGGCCCTGGTCCCCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  93.9% (46/49)    IGHJ5*02     3    ------..........................AA........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_75130

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           315     5e-88
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGTGTACGGAAATCAG	TATGATGGTAGTGGTTA	CCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTGTACGGAAATCAGTATGATGGTAGTGGTTACCCTGACTCC	ARGVYGNQYDGSGYPDS	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  S  A  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_7268   1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAGTGCTTACTACTGGAGTTGGGTCCGGCAGCCCCCAGGGAAGGGGCTGGAG  90
V  91.4% (222/243)  IGHV4-59*08  49   ...........................G..............AG............C...A......................A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  L  Y  Y  R  G  S  T  R  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  K 
                    Query_7268   91   TGGATTGGGAATCTGTATTACAGAGGTAGTACCAGATACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAG  180
V  91.4% (222/243)  IGHV4-59*08  139  .........T..A.C........T..G..C....AC....................................G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  E  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  Y  G  N  Q  Y  D  G 
                    Query_7268   181  CAATTCTCCCTGGAGGTGCGCTCTGTCACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGGGGTGTACGGAAATCAGTATGATGGT  270
V  91.4% (222/243)  IGHV4-59*08  229  ..G.........A..C..A.......G....................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD3-22*01  8    ---------------------------------------------------------------------------------......A..  16

                                      ----------------->                                  
                                       S  G  Y  P  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7268   271  AGTGGTTACCCTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  94.1% (16/17)    IGHD3-22*01  17   ........--------------------------------------------  24
J  97.6% (40/41)    IGHJ4*02     8    -----------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_10487

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           310     1e-86
IGHD4-17*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	GACTACG	TAGAGATGGCTTCGAGAACCAATATGGGAGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTACGTAGAGATGGCTTCGAGAACCAATATGGGAGATTTGACTAC	ARLRRDGFENQYGRFDY	237	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	236	114	101	7	6	88.6
CDR3-IMGT (germline)	237	240	4	4	0	0	100
Total	N/A	N/A	246	224	16	6	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7269   1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTGGATTCACCTTTAGTAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (224/246)  IGHV3-23*01  47   .....................C..C..................C..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  T  G  G  S  T  F  Y  A  A  S  V  K  G  R  Y  T  I  S  R  D  N  S  
                    Query_7269   91   AGTGGGTCTCAGGTATTAGCGGCACTGGTGGTAGTACATTCTACGCGGCCTCCGTGAAGGGCCGGTACACCATCTCCAGAGACAATTCCA  180
V  91.1% (224/246)  IGHV3-23*01  137  ............C......T..T.G.........C....A......A.A.................T.......................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K        V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  L  R  R  D  G  F  E  
                    Query_7269   181  A------GGTCTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAGACTACGTAGAGATGGCTTCGAGA  264
V  91.1% (224/246)  IGHV3-23*01  227  .GAACAC.C.G.......................................G...............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD4-17*01  2    ------------------------------------------------------------------.......-----------------  8

                                      GT-------------------->                                  
                                      N  Q  Y  G  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7269   265  ACCAATATGGGAGATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_10482

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*03                                                                                           305     3e-85
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	GGGG	GCACTGGCTGG	CTGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGGGGCACTGGCTGGCTGAATGACTTC	AGGTGWLNDF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	220	25	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  T  S  R  F  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7270   1    GGTCCCTGAGACTCTCCTGTGCAGTGTCTGGGTTCACCACCAGTCGTTTCTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGTCTGG  90
V  89.8% (220/245)  IGHV3-74*03  47   ........................CC.....A......TT....A.C.A....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  L  I  L  S  D  G  S  D  A  T  Y  A  D  S  V  K  G  R  F  T  I  S  I  D  N  A  
                    Query_7270   91   TGTGGGTCTCACTTATTCTGAGTGATGGGAGTGACGCAACGTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCATCGACAACGCCA  180
V  89.8% (220/245)  IGHV3-74*03  137  ............G....AAT............AG.A..........................................GA..........  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  V  F  L  Q  M  D  S  L  R  D  E  D  T  A  V  Y  Y  C  A  G  G  T  G  W  L  N  D  
                    Query_7270   181  AGAACACGGTCTTTCTGCAAATGGACAGTCTGAGAGACGAGGACACGGCTGTTTATTATTGTGCAGGGGGCACTGGCTGGCTGAATGACT  270
V  89.8% (220/245)  IGHV3-74*03  227  ........C.G.A..........A............C...............G.....C......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.9% (10/11)    IGHD6-19*01  8    ---------------------------------------------------------------------...G.......----------  18
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7270   271  TCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_73773

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            357     1e-100
IGHD3-10*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTTCAAGGACAC	ATTACAATGGTTCGGGGAG	CCCCCCCACTTCGGTTTGGACGT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGAGTTCAAGGACACATTACAATGGTTCGGGGAGCCCCCCCACTTCGGTTTGGACGTC	VREFKDTLQWFGEPPHFGLDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7271   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGACAAGCTCCAGGGAAGGGCCTGG  90
V  95.6% (239/250)  IGHV3-9*01   47   ........................C..........................................G......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  K  N  S  T  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7271   91   AGTGGGTCTCAGGTATTAGCTGGAAAAATTCTACCATAGGATATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (239/250)  IGHV3-9*01   137  ...................T.....T.G.GG..G......C.................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  V  R  E  F  K  D  T  L  Q  
                    Query_7271   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGTAAGAGAGTTCAAGGACACATTACAAT  270
V  95.6% (239/250)  IGHV3-9*01   227  ...............................................................C..A...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  94.7% (18/19)    IGHD3-10*01  3    ----------------------------------------------------------------------------------.....T..  10

                                      DR3-IMGT-------------------------->                                  
                                      W  F  G  E  P  P  H  F  G  L  D  V  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7271   271  GGTTCGGGGAGCCCCCCCACTTCGGTTTGGACGTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  94.7% (18/19)    IGHD3-10*01  11   ...........----------------------------------------------------------  21
J  100.0% (35/35)   IGHJ4*02     14   ----------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_10480

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           347     7e-98
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCT	GTGGCTGG	AAAAGCAGTCCG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTGTGGCTGGAAAAGCAGTCCGTGATGCTTTTGATATC	ARSVAGKAVRDAFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  G  A  A  S  G  F  T  F  S  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7272   1    GGTCCCTGAGACTCTCCGGTGCAGCCTCTGGATTCACCTTCAGTGACTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-30*04  47   .................T..........................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  H  K  Y  Y  A  D  S  V  K  G  R  L  T  V  S  R  D  N  S  
                    Query_7272   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTCATAAATACTATGCAGACTCCGTGAAGGGCCGACTCACCGTCTCCAGAGACAATTCCG  180
V  94.8% (235/248)  IGHV3-30*04  137  ................................A..........C.....................T.....A.................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  T  L  Y  V  Q  V  N  S  L  R  P  E  D  T  A  M  Y  Y  C  A  R  S  V  A  G  K  A  V  
                    Query_7272   181  AGAACACGCTCTATGTGCAAGTGAACAGCCTGAGACCTGAGGACACGGCTATGTATTACTGTGCGAGATCTGTGGCTGGAAAAGCAGTCC  270
V  94.8% (235/248)  IGHV3-30*04  227  ..........G...C.....A..............G..............G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18

                                      ---------------->                                
                                      R  D  A  F  D  I  W  G  R  G  T  V  V  I  V  S  S
                    Query_7272   271  GTGATGCTTTTGATATCTGGGGCCGAGGGACAGTGGTCATCGTGTCTTC  319
J  91.7% (44/48)    IGHJ3*02     1    -.......................A.......A......C...C.....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_213792

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           37.2    1e-06 
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAG	TTACTTTGATAGTAGTGGTTAT	GCTCAGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTACTTTGATAGTAGTGGTTATGCTCAGGACGGTATGGACGTC	ARESYFDSSGYAQDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7273   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  S  I  S  S  S  S  N  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7273   91   ACTGGGTCTCATCCATTAGTAGTAGTAGTAATTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  .G............................G...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  R  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  S  Y  F  D  S  S  
                    Query_7273   181  AGAACTCACTGTATCTGCAAATGAACAGGCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAAAGTTACTTTGATAGTAGTG  270
V  98.4% (246/250)  IGHV3-21*01  227  ............................C.........................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.5% (21/22)    IGHD3-22*01  4    -------------------------------------------------------------------------.....A...........  20

                                      IMGT--------------------->                                 
                                      G  Y  A  Q  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7273   271  GTTATGCTCAGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  95.5% (21/22)    IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_55071

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           366     2e-103
IGHD3-10*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTGG	TATGGTTCGG	CAACTTATCCCCATTACCG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATTGGTATGGTTCGGCAACTTATCCCCATTACCGCTACTACGGTATGGACGTC	AKDWYGSATYPHYRYYGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  I  F  T  F  S  S  N  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7274   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTATATTCACCTTTAGCAGTAATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-23*01  47   .............................GG...............CT..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7274   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.8% (242/250)  IGHV3-23*01  137  .................................G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  D  W  Y  G  S  A  T  
                    Query_7274   181  AGAACACGCTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTTCTGTGCGAAAGATTGGTATGGTTCGGCAACTT  270
V  96.8% (242/250)  IGHV3-23*01  227  .................C..................................A....A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-10*01  8    --------------------------------------------------------------------------..........------  17

                                      R3-IMGT------------------------>                                 
                                      Y  P  H  Y  R  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7274   271  ATCCCCATTACCGCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
J  100.0% (52/52)   IGHJ6*02     11   -------------....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_325579

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           341     6e-96
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  A 
                    Query_7275   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGGAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGCA  90
V  93.6% (234/250)  IGHV4-61*01  49   ....................................G..........T........................................G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  S  G  T  A  F  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S 
                    Query_7275   91   CTGGAGTGGATTGGGTATATCTATAACAGTGGGACCGCCTTCTATAACCCCTCCCTCAGGAGCCGAGTCACCATATCAGTAGACACGTCC  180
V  93.6% (234/250)  IGHV4-61*01  139  ........................T.........G.A..AA...C.............A...T...........................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  S  L  S  S  V  T  A  S  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_7275   181  AAGAACCAGTTCTCCCTGAGCCTGAGCTCTGTGACCGCTTCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  93.6% (234/250)  IGHV4-61*01  229  ...................AG..................G..........C........C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_7275   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_325578

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           339     2e-95
IGHD3-9*01                                                                                            29.5    2e-04
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATCCAC	GTATAACGATGTTTTGACTGG	CCAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATCCACGTATAACGATGTTTTGACTGGCCATAACTGGTTCGACCCC	ARGSTYNDVLTGHNWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  L  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7276   1    GGTCCCTGAGACTCTCTTGTACAGCCTCTGGGTTCATTCTCAGTAGTTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-48*03  47   ................C...G..........A....CCT...................C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  V  R  G  T  T  I  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  H  A  
                    Query_7276   91   AGTGGGTTTCATACATTAGTGTTAGAGGTACTACCATATACTACGCAGACTCTGTGCAGGGCCGATTTACCATCTCTAGAGACCACGCCA  180
V  93.6% (233/249)  IGHV3-48*03  137  ....................AG...T....G.........................A..........C........C......A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      T  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  S  T  Y  N  D  V  
                    Query_7276   181  CGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGATCCACGTATAACGATGTTT  270
V  93.6% (233/249)  IGHV3-48*03  227  A....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD3-9*01   1    ----------------------------------------------------------------------------....T.....A...  14

                                      IMGT--------------------->                                  
                                      L  T  G  H  N  W  F  D  P  W  G  Q  G  P  L  V  T  V  S  S  
                    Query_7276   271  TGACTGGCCATAACTGGTTCGACCCCTGGGGCCAGGGACCCCTGGTCACCGTCTCCTCAG  330
D  90.5% (19/21)    IGHD3-9*01   15   .......-----------------------------------------------------  21
J  98.0% (48/49)    IGHJ5*02     3    -----------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_91408

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           336     1e-94
IGHD4-4*01                                                                                            12.2    31   
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-4*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	CTACAG	GTTGCGGGG	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CCGAGAGGCCTACAGGTTGCGGGGGGTATGGAGGTC	PRGLQVAGGMEV	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  N  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  L  Q  P  S  G  K  G  L  E  
                    Query_7277   4    CCCTGAGACTCTCCTGCAATGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAACTGGATCCTGCAGCCCTCAGGGAAGGGACTGGAGT  93
V  94.2% (229/243)  IGHV4-59*01  50   .....TCC...A......C...................................G........G.......C..................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  S  G  T  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_7277   94   GGATTGGGTATATCCATTACAGTGGGACCACCAGCTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  94.2% (229/243)  IGHV4-59*01  140  ..............T............G.....A........................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  P  R  G  L  Q  V  A  G  G  M  E  
                    Query_7277   184  ACTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTCCGAGAGGCCTACAGGTTGCGGGGGGTATGGAGG  273
V  94.2% (229/243)  IGHV4-59*01  230  .G................G.....................................G......---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD4-4*01   4    -----------------------------------------------------------------......-------------------  9
J  93.2% (41/44)    IGHJ6*02     18   --------------------------------------------------------------------------------........C.  27

                                      ->                                
                                      V  W  G  Q  G  T  T  V  P  V  S  S
                    Query_7277   274  TCTGGGGCCAAGGGACCACTGTCCCCGTCTCCTC  307
J  93.2% (41/44)    IGHJ6*02     28   ...................G...A..........  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_91409

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD3-3*01                                                                                            23.8    0.010
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	GGAGTGGTTATT	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGGAGTGGTTATTGGCCTACTTTGACTAC	AKEEWLLAYFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  F  S  H  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7278   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTTTTCTCATAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-23*01  47   ...................................ACC.T.AGC..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  S  N  S  P  E  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7278   91   AGTGGGTCGCAGGTATCAGTAATAGTCCTGAAAGCACATACTACGCTGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  90.8% (227/250)  IGHV3-23*01  137  ........T...C...T...GG....GG..GT..............A...........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      R  N  T  L  Y  L  Q  M  N  G  V  R  A  E  D  T  A  V  Y  Y  C  A  K  E  E  W  L  L  A  Y  
                    Query_7278   181  GGAACACCCTGTATCTGCAAATGAACGGCGTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAAGAGGAGTGGTTATTGGCCTACT  270
V  90.8% (227/250)  IGHV3-23*01  227  A......G..................A..C......................A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD3-3*01   15   ----------------------------------------------------------------------............--------  26
J  91.5% (43/47)    IGHJ4*02     2    -------------------------------------------------------------------------------------.....  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_7278   271  TTGACTACTGGGGCCAGGGGACCCTGGTCAGTGTTTCCTCAG  312
J  91.5% (43/47)    IGHJ4*02     7    ...................A..........CC..C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_91404

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD4-17*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GCCT	TGACTACGGTGAC	AACGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGCCTTGACTACGGTGACAACGCCTTTGCTTAC	AKGLDYGDNAFAY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  T  G  K  G  L  
                    Query_7279   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTATGCCATGAGCTGGGTCCGCCAGGCTACAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-23*01  47   .............................................G............................C...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  N  I  G  G  T  G  G  N  R  V  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_7279   91   AGTGGGTCTCAAATATTGGAGGTACTGGTGGTAACAGAGTCTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-23*01  137  ...........GC....A.T....G........G..C.TA...............................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  L  D  Y  G  D  N  
                    Query_7279   181  AGAACACGCTCTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAAGGCCTTGACTACGGTGACAACG  270
V  94.4% (235/249)  IGHV3-23*01  227  ..........G.........................................A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (13/13)   IGHD4-17*01  1    -------------------------------------------------------------------------.............----  13

                                      ---------->                                  
                                      A  F  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7279   271  CCTTTGCTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  95.5% (42/44)    IGHJ4*02     5    -.....AC.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_91405

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD3-3*01                                                                                            10.3    134   
IGHJ3*01                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTGAATTC	TTTTG	CCACCGAG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTGAATTCTTTTGCCACCGAGGATGCTTTTGATGTC	ASLNSFATEDAFDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	267	21	0	92.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  M  Q  S  G  A  V  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  T  S
                    Query_7280   1    GCAGCTGATGCAGTCTGGAGCAGTGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATTCGACTTTACCACCTC  90
V  92.7% (267/288)  IGHV5-51*01  6    .......G...............A..................................................A.AG........G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  Q  W  M  G  V  I  Y  P  D  D  S  G  T  R  Y  S  P
                    Query_7280   91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGCAATGGATGGGAGTCATCTATCCTGATGACTCTGGTACCAGATATAGTCC  180
V  92.7% (267/288)  IGHV5-51*01  96   C.......................................G.G........GA............G........A.........C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  A  K  S  I  N  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_7280   181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGCCAAGTCCATCAACACTGCCTACCTGCAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  92.7% (267/288)  IGHV5-51*01  186  ........A.......................A...........G...C...............A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  S  L  N  S  F  A  T  E  D  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7280   271  CATGTATTACTGTGCGAGCCTGAATTCTTTTGCCACCGAGGATGCTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  359
V  92.7% (267/288)  IGHV5-51*01  276  ..................-----------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                          
D  100.0% (5/5)     IGHD3-3*01   11   ---------------------------.....---------------------------------------------------------  15
J  100.0% (49/49)   IGHJ3*01     2    ----------------------------------------.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_325571

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_7281   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_7281   91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_7281   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_7281   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_91407

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           357     1e-100
IGHD6-13*01                                                                                           21.8    0.041 
IGHJ3*01                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  L  S  G  G  S  I  S  S  G  G  F  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_7282   1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGGCTCCATCAGCAGTGGTGGTTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.6% (239/250)  IGHV4-31*03  49   .....................G..............................A........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_7282   91   CTGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCT  180
V  95.6% (239/250)  IGHV4-31*03  139  .....................T..................A.................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V 
                    Query_7282   181  AAGAACCAATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTA  270
V  95.6% (239/250)  IGHV4-31*03  229  ........G..........A.....GC...............................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD6-13*01  11   ------------------------------------------------------------------------...........-------  21

                                      ----------------->                                  
                                       G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7282   271  GGCGATGCTTTTGATGCCTGGGGCCAAGGGACGATGGTCACCGTCTCTTCAG  322
J  95.9% (47/49)    IGHJ3*01     2    ---.............T...............A...................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_325577

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD7-27*01                                                                                           12.2    36    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGGCCAACCGCCTGGGCGTTAAC	ACTGGG	AC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGCCAACCGCCTGGGCGTTAACACTGGGACCTACTTTGACTCC	ARRANRLGVNTGTYFDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  G  S  G  D  T  F  P  G  Y
                    Query_7283   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGAGACACCTTTCCCGGCTA  90
V  94.5% (274/290)  IGHV5-51*01  6    .............................A...........................................T...G....A..A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  F  P  G  D  S  D  T  K  Y  S  P
                    Query_7283   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAGGGCCTGGAGTGGATGGGGTTCATCTTTCCTGGTGACTCTGATACCAAATACAGCCC  180
V  94.5% (274/290)  IGHV5-51*01  96   .................................A..................A......A....................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  Q  G  Q  V  T  F  S  A  D  K  S  I  G  T  A  Y  L  Q  W  S  R  L  K  A  S  D  P  A
                    Query_7283   181  GGCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCGGCACCGCCTACCTGCAGTGGAGTAGGTTGAAGGCCTCGGACCCCGC  270
V  94.5% (274/290)  IGHV5-51*01  186  .T....................A....................A......................C..CC..............A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  R  A  N  R  L  G  V  N  T  G  T  Y  F  D  S  W  G  Q  G  T  L  V  S  V
                    Query_7283   271  CATGTATTACTGTGCGAGACGGGCCAACCGCCTGGGCGTTAACACTGGGACCTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCTCCGT  360
V  94.5% (274/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD7-27*01  4    -------------------------------------------......-----------------------------------------  9
J  95.7% (45/47)    IGHJ4*02     2    ---------------------------------------------------...........A......................A....  40

                                              
                                        S  S  
                    Query_7283   361  CTCCTCAG  368
J  95.7% (45/47)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_325576

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           294     6e-82
IGHD2-15*01                                                                                           10.3    126  
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGATACCGCAGTTACTTCA	GATAT	CACTGCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCGATACCGCAGTTACTTCAGATATCACTGCAACTACCGCGGTATGGACGTC	AKDRYRSYFRYHCNYRGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7284   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTTACGTTCAGTAGTTATGGCATGCATTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  87.6% (219/250)  IGHV3-30*18  47   ............................T.....C..C........C...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  V  A  V  I  S  D  D  G  F  E  H  N  Y  A  D  Y  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_7284   91   AGTCGGTGGCAGTTATTTCGGATGATGGATTCGAACACAATTATGCAGACTACGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCG  180
V  87.6% (219/250)  IGHV3-30*18  137  ...G............A..AT........AGTA.TA.AT.C..........C...................A.................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      G  K  T  M  Y  L  H  M  N  G  L  R  P  E  G  A  A  V  Y  Y  C  A  K  D  R  Y  R  S  Y  F  
                    Query_7284   181  GGAAGACGATGTATCTGCACATGAACGGCCTGAGACCGGAGGGCGCGGCAGTGTATTACTGTGCGAAAGACCGATACCGCAGTTACTTCA  270
V  87.6% (219/250)  IGHV3-30*18  227  A...C...C..........A......A........G.T....A.A....T....................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      R3-IMGT------------------------>                                 
                                      R  Y  H  C  N  Y  R  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_7284   271  GATATCACTGCAACTACCGCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  335
D  100.0% (5/5)     IGHD2-15*01  3    .....------------------------------------------------------------  7
J  94.3% (50/53)    IGHJ6*02     10   ------------.....TA...................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_91402

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           302     3e-84
IGHD2-8*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	N/A	GATATTGTACCAGTGGT	CCATGCCCCGCCTTGGGTA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TTGACAGGATATTGTACCAGTGGTCCATGCCCCGCCTTGGGTAAC	LTGYCTSGPCPALGN	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	249	7	4	3	0	57.1
Total	N/A	N/A	249	221	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  T  N  Y  V  V  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7285   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTACCAACTATGTCGTGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  88.8% (221/249)  IGHV3-23*01  47   ....................................C.....G..G.....C.A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  E  T  G  G  V  T  V  Y  A  D  S  V  K  G  R  V  T  I  S  R  D  N  P  
                    Query_7285   91   AGTGGGTCTCAGTCATTAGTGAGACTGGTGGTGTCACAGTCTACGCGGATTCCGTGAAGGGCCGGGTCACCATCTCCAGAGACAATCCCA  180
V  88.8% (221/249)  IGHV3-23*01  137  ............CT.......GT.G.......AG....TA......A..C...............T....................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  V  F  L  Q  L  N  S  L  R  D  E  D  T  A  V  Y  Y  C  L  T  G  Y  C  T  S  G  P  
                    Query_7285   181  AGAACACGGTGTTTTTGCAATTGAACAGCCTGAGAGACGAGGACACGGCCGTTTATTACTGTTTGACAGGATATTGTACCAGTGGTCCAT  270
V  88.8% (221/249)  IGHV3-23*01  227  ........C...A.C.....A...............C...............A.........GC..A..---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.2% (15/17)    IGHD2-8*01   3    ---------------------------------------------------------------------..........T.A....----  19

                                      ---------------->                                  
                                      C  P  A  L  G  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7285   271  GCCCCGCCTTGGGTAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (36/36)   IGHJ4*02     13   ---------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_325574

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           355     4e-100
IGHD3-10*01                                                                                           12.2    37    
IGHJ4*03                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ4*03	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAACA	TGTCATGTA	TCGGGG	GGGTCGCTTGGA	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATGTCATGTATCGGGGGGGTCGCTTGGACTACTTTGACTCC	AKHVMYRGGRLDYFDS	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	68	6	0	91.9
CDR1-IMGT	77	100	24	17	7	0	70.8
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	18	6	0	75
FR3-IMGT	176	289	114	104	10	0	91.2
CDR3-IMGT (germline)	290	297	8	7	1	0	87.5
Total	N/A	N/A	295	261	34	0	88.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  P  L  R  I  S  C  K  G  S  G  N  T  F  T  
                    Query_7286   3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGCCTCTGAGGATTTCCTGTAAGGGGTCTGGAAACACTTTCACCA  92
V  88.5% (261/295)  IGHV5-51*01  2    ..................................A........G...T......A...C...........T......T...GC..T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  S  W  I  A  W  V  R  Q  L  P  E  K  G  L  E  W  M  G  I  V  F  P  D  D  S  D  T  I  Y  
                    Query_7286   93   CCTCGTGGATCGCCTGGGTGCGCCAGCTGCCCGAGAAAGGCCTGGAGTGGATGGGCATCGTCTTTCCTGATGATTCAGACACCATATACA  182
V  88.5% (261/295)  IGHV5-51*01  92   G..AC.......G.............A......G.....................G...A...A.....G...C..T..T....G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  Q  G  L  I  T  I  S  A  D  K  S  L  K  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_7286   183  ATCCGTCCTTCCAAGGCCTGATCACCATCTCGGCCGACAAGTCCCTCAAGACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  88.5% (261/295)  IGHV5-51*01  182  GC................A.G..........A............A...GC........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      T  A  I  Y  Y  C  A  K  H  V  M  Y  R  G  G  R  L  D  Y  F  D  S  W  G  Q  G  T  L  V  I  
                    Query_7286   273  CCGCCATATATTACTGTGCGAAACATGTCATGTATCGGGGGGGTCGCTTGGACTACTTTGACTCCTGGGGCCAAGGGACCCTGGTCATCG  362
V  88.5% (261/295)  IGHV5-51*01  272  .......G.............G...-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD3-10*01  14   ----------------------------------......--------------------------------------------------  19
J  91.5% (43/47)    IGHJ4*03     2    ----------------------------------------------------...........A.......................C..  39

                                               
                                      A  S  S  
                    Query_7286   363  CCTCTTCAG  371
J  91.5% (43/47)    IGHJ4*03     40   T...C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_274833

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           280     1e-77
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	CCTGTCCCGCGTTATGG	TTTTTGGAATGGTTATT	CCAAAATCTAACTCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCCTGTCCCGCGTTATGGTTTTTGGAATGGTTATTCCAAAATCTAACTCTTTCGACACC	ARGLSRVMVFGMVIPKSNSFDT	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	212	33	0	86.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  L  D  G  H  Y  W  T  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_7287   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGGTCGCTCGATGGTCACTACTGGACCTGGATACGCCAGGCCCCAGGGAAGGGTCTGGAG  90
V  86.5% (212/245)  IGHV4-34*01  49   ..................G......A.........CT..AG....T.........G......C......C.............G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  T  G  D  T  N  Y  N  S  S  L  K  S  R  V  G  L  S  V  D  T  S  R  N 
                    Query_7287   91   TGGATTGGGGAGATTTCTCATACTGGAGACACCAACTACAACTCGTCCCTCAAGAGTCGAGTCGGCTTGTCAGTTGACACGTCCAGGAAC  180
V  86.5% (212/245)  IGHV4-34*01  139  ...........A..CAA.....G....AG.............C....................AC.A.A.....A..........A....  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  T  S  L  T  G  A  D  T  G  V  Y  Y  C  A  R  G  L  S  R  V  M  V  F  G 
                    Query_7287   181  CAGTTCTCCCTGAAGTTGACCTCCCTGACCGGCGCGGACACGGGTGTCTATTACTGTGCGCGAGGCCTGTCCCGCGTTATGGTTTTTGGA  270
V  86.5% (212/245)  IGHV4-34*01  229  ...............C...G...TG......C...........C...G............A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  94.1% (16/17)    IGHD3-3*01   10   ----------------------------------------------------------------------------------........  17

                                      -IMGT--------------------------->                                  
                                       M  V  I  P  K  S  N  S  F  D  T  W  G  P  G  V  L  V  T  V  S  S  
                    Query_7287   271  ATGGTTATTCCAAAATCTAACTCTTTCGACACCTGGGGCCCGGGAGTCCTGGTTACCGTCTCCTCAG  337
D  94.1% (16/17)    IGHD3-3*01   18   G........----------------------------------------------------------  26
J  88.4% (38/43)    IGHJ5*02     9    ------------------------......C.........A....AC......C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_274832

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-9*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCGGTT	GTATTACGATATCTTG	CGGCGGGGAGG	CTACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGTTGTATTACGATATCTTGCGGCGGGGAGGCTACAACGGTTTGGACGTC	ARGRLYYDILRRGGYNGLDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  V  G  S  F  S  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7288   1    ACCCTGTCCCTCACCTGCGCTGTCTATGTTGGGTCCTTCAGTGATTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (233/245)  IGHV4-34*01  49   ............................G..............G..............................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  N  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7288   91   TGGATTGGCGAAATCAATCATAGTGGATCCAACAGCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  ........G..................AG..C..A.......................................A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  D  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  L  Y  Y  D  I  L  R 
                    Query_7288   181  CAGTTCTCCCTGAAGCTGGACTCCGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCCGGTTGTATTACGATATCTTGCGG  270
V  95.1% (233/245)  IGHV4-34*01  229  ..................AG...T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  93.8% (15/16)    IGHD3-9*01   1    -----------------------------------------------------------------------............T...---  16

                                      GT------------------------>                                 
                                       R  G  G  Y  N  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7288   271  CGGGGAGGCTACAACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
J  96.2% (50/52)    IGHJ6*02     11   --------....T.....A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_274831

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           353     9e-100
IGHD6-13*01                                                                                           14.1    8.2   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACTGG	GCAGCAG	GTGAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACTGGGCAGCAGGTGACTGACTAC	ARDTGQQVTDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7289   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTTCCTATAGCATGAACTGGGTCCGTCAGGCTCCAGGGAAGGGTCTGG  90
V  95.2% (238/250)  IGHV3-21*01  47   ....................................C.......AG.....................C.................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  N  S  S  S  F  I  F  H  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_7289   91   AGTGGGTCTCATCCATTAGTAATAGTAGTAGTTTCATATTCCACGCAGACTCAGTGAAGGGCCGATTCACCATATCCAGAGACGACGCCA  180
V  95.2% (238/250)  IGHV3-21*01  137  .....................G...........A.....A.T...............................C.........A......  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      T  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  T  G  Q  Q  V  T  
                    Query_7289   181  CGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATACTGGGCAGCAGGTGACTG  270
V  95.2% (238/250)  IGHV3-21*01  227  A.....................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-13*01  8    ----------------------------------------------------------------------------.......-------  14
J  97.6% (40/41)    IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_7289   271  ACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  309
J  97.6% (40/41)    IGHJ4*02     10   ...........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_87233

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         283     1e-78
IGHD4-17*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GTCGAAAAGG	CTACGGTGACTAC	GGAACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGTCGAAAAGGCTACGGTGACTACGGAACTTTTGACTCC	ARGRKGYGDYGTFDS	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	96	18	0	84.2
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	215	34	0	86.3


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  S  V  A  G  D  S  I  R  S  S  D  D  Y  W  N  W  I  R  Q  P  P  G  K  G  
                    Query_7290     4    CCCTGAGACTCTCCTGCTCTGTCGCTGGTGACTCCATCAGAAGTAGTGATGACTACTGGAATTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  86.3% (215/249)  IGHV4-30-4*01  50   .....TCC...A.....A.....T......G.........C...G.....T.........G.............................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  H  Y  S  G  A  S  Y  S  N  P  S  L  R  S  R  V  S  L  S  V  D  T  S  
                    Query_7290     94   TGGAGTGGATTGGCTACATCCATTACAGTGGGGCCTCCTACTCCAATCCGTCCCTCAGGAGTCGAGTTTCCTTATCGGTGGACACGTCTG  183
V  86.3% (215/249)  IGHV4-30-4*01  140  .............G......T...........AG.A......A...C..........A..........A..A....A..A........CA  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        G  N  H  F  S  L  N  V  R  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  K  G  Y  G  D  
                    Query_7290     184  GGAACCACTTCTCCCTGAACGTGAGGTCTCTGACGGCCGCGGACACGGCCGTGTATTATTGTGCCAGAGGTCGAAAAGGCTACGGTGACT  273
V  86.3% (215/249)  IGHV4-30-4*01  230  A......G...........GC....C...G....T.....A.................C..........---------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD4-17*01    4    -------------------------------------------------------------------------------...........  14

                                        ---------------->                                  
                                        Y  G  T  F  D  S  W  G  L  G  T  L  V  S  V  S  S  
                    Query_7290     274  ACGGAACTTTTGACTCCTGGGGCCTGGGAACTCTGGTCTCCGTCTCCTCAG  324
D  100.0% (13/13)   IGHD4-17*01    15   ..-------------------------------------------------  16
J  90.7% (39/43)    IGHJ4*02       6    --------.......A........A......C......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_274837

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            283     1e-78
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGGCCACGGGCTC	AGCAGTGGC	GATGACTCTGTTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGCCACGGGCTCAGCAGTGGCGATGACTCTGTTTATGACTTG	VGHGLSSGDDSVYDL	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	100	14	0	87.7
CDR3-IMGT (germline)	241	241	1	1	0	0	100
Total	N/A	N/A	241	211	30	0	87.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  R  V  S  G  G  C  I  S  D  S  H  W  W  N  W  V  R  R  P  P  G  K  G  L 
                    Query_7291   1    ACCCTGTCCCTCACCTGCCGTGTCTCTGGTGGCTGCATCAGCGACAGTCACTGGTGGAATTGGGTCCGCCGGCCCCCAGGGAAGGGGCTG  90
V  87.6% (211/241)  IGHV4-4*02   49   ..................GC..............C.......AGT...A.........G...........A...................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  V  G  E  V  F  H  S  G  I  A  K  Y  N  P  S  L  Q  S  R  L  S  M  S  L  D  K  S  R 
                    Query_7291   91   GAGTGGGTTGGGGAAGTTTTTCACAGTGGGATCGCCAAGTACAACCCGTCCCTTCAGAGTCGACTCTCCATGTCACTAGACAAGTCTAGG  180
V  87.6% (211/241)  IGHV4-4*02   139  ......A........A.C.A...T.......G.A....C..............CA........G..A....A...G..........C.A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  K  L  Q  S  V  T  A  A  Y  T  A  V  Y  Y  C  V  G  H  G  L  S  S  G  D  D 
                    Query_7291   181  AACCAGTTCTCCCTGAAGCTGCAGTCTGTGACCGCCGCGTACACTGCCGTGTATTACTGTGTGGGCCACGGGCTCAGCAGTGGCGATGAC  270
V  87.6% (211/241)  IGHV4-4*02   229  .....................AGC...............G....G................-----------------------------  289
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  100.0% (9/9)     IGHD6-19*01  7    ---------------------------------------------------------------------------.........------  15

                                      -------------->                                  
                                       S  V  Y  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7291   271  TCTGTTTATGACTTGTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  319
J  92.7% (38/41)    IGHJ4*02     8    --------.....AC.................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_274836

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_7292   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AGT.A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S 
                    Query_7292   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T.A....A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_7292   181  CAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ..............G.....C..................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7292   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_274835

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           279     3e-77
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	216	28	6	86.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_7293   4    CCCTGAGACTCTCCTGTGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.4% (216/250)  IGHV4-34*01  50   .....TCC...A....C.....C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_7293   94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.4% (216/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_7293   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.4% (216/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_7293   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_339935

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHD6-13*01                                                                                           14.1    8.7   
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGGC	GTATAGC	CCCGGGGGGGTGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAGGGGGCGTATAGCCCCGGGGGGGTGAACTACTACAGTATGGACGTC	AREGAYSPGGVNYYSMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  G  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7294   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTCAGTGGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-74*01  47   ......................................T.....A.............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  A  S  R  I  N  S  D  G  S  T  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7294   91   TGTGGGCCTCACGTATTAACAGTGATGGGAGTACAACAAGTTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-74*01  137  ......T............T.............GC.....C.................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  F  Y  C  A  R  E  G  A  Y  S  P  G  
                    Query_7294   181  AGAACACGCTGTATCTGCAAATGAATAGTCTGAGAGCCGAGGACACGGCAGTGTTTTACTGTGCAAGAGAGGGGGCGTATAGCCCCGGGG  270
V  96.0% (240/250)  IGHV3-74*01  227  .........................C.......................T....A...............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-13*01  3    ----------------------------------------------------------------------------.......-------  9

                                      IMGT--------------------->                                 
                                      G  V  N  Y  Y  S  M  D  V  W  G  Q  G  T  T  V  T  V  A  S 
                    Query_7294   271  GGGTGAACTACTACAGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCGCCTCA  329
J  96.2% (51/53)    IGHJ6*02     10   ------........G......................................T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_55075

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCGGAGGCTCC	ACTATGG	CCACCTGACACCAC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCGGAGGCTCCACTATGGCCACCTGACACCACTTGAGTAC	ASRRLHYGHLTPLEY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  N  W  V  R  Q  T  P  G  R  E  L  E 
                    Query_7295   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAACTGGGTCCGCCAGACCCCAGGGAGGGAGCTGGAG  90
V  92.1% (223/242)  IGHV4-34*01  49   .......................................................G....A........C.........A..G.......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  V  N  H  S  G  N  S  N  S  N  P  S  L  K  S  R  V  T  I  L  V  D  T  S  K  N 
                    Query_7295   91   TGGCTTGGGGAAGTCAATCATAGTGGCAACAGCAACTCCAACCCGTCCCTCAAGAGTCGAGTCACCATATTAGTCGACACGTCCAAGAAC  180
V  92.1% (223/242)  IGHV4-34*01  139  ...A........A.............A.G..C.....A................................C...A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  S  R  R  L  H  Y  G  H  L  T 
                    Query_7295   181  CAGTTCTCCCTGAAACTGACTTCTGTGACCGCCGCGGACACGGCTCTTTATTATTGTGCGAGTCGGAGGCTCCACTATGGCCACCTGACA  270
V  92.1% (223/242)  IGHV4-34*01  229  ..............G....GC........................G.G.....C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD3-10*01  6    -------------------------------------------------------------------------.......----------  12

                                      ----------->                                 
                                       P  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_7295   271  CCACTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  315
J  97.6% (40/41)    IGHJ4*02     7    ----....C....................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_274839

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           308     4e-86
IGHD3-10*01                                                                                           39.1    2e-07
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	G	ACTATGGAACGGGGAGTTATTATAAC	AAGACCC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACTATGGAACGGGGAGTTATTATAACAAGACCCATGGACGTC	AKTMERGVIITRPMDV	232	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	10	1	0	90.9
CDR1-IMGT	19	42	24	21	3	0	87.5
FR2-IMGT	43	93	51	51	0	0	100
CDR2-IMGT	94	117	24	20	4	0	83.3
FR3-IMGT	118	231	114	106	8	0	93
CDR3-IMGT (germline)	232	236	5	5	0	0	100
Total	N/A	N/A	229	213	16	0	93


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  S  F  S  H  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_7296   8    GTGCAGTCTCTGGATTCAGCTTCAGTCACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATAG  97
V  93.0% (213/229)  IGHV3-30*18  65   ......C...........C.......AG.............................................................T  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      A  Y  D  E  S  F  K  S  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  K  S  T  L  Y  L  
                    Query_7296   98   CATATGATGAAAGTTTTAAATCTTACGCAGCCTCCGTGAAGGGCCGATTTACCATCTCCAGAGACAATTCCAAGAGCACGCTGTATCTGC  187
V  93.0% (213/229)  IGHV3-30*18  155  .........G....AA.....AC..T....A..................C.........................A..............  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  K  T  M  E  R  G  V  I  I  T  R  P  M  D  
                    Query_7296   188  AAATGAACAGCCTGAGAGATGAGGACACGGCTGTGTATTATTGTGCGAAGACTATGGAACGGGGAGTTATTATAACAAGACCCATGGACG  277
V  93.0% (213/229)  IGHV3-30*18  245  ..................C.....................C........-----------------------------------------  293
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  92.3% (24/26)    IGHD3-10*01  6    --------------------------------------------------.......TT.................--------------  31
J  97.6% (41/42)    IGHJ6*02     21   -----------------------------------------------------------------------------------.......  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7296   278  TCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  312
J  97.6% (41/42)    IGHJ6*02     28   ...............................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_55074

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           377     9e-107
IGHD3-3*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTAAA	ACGATTTTTGGAGTGGTTAT	CCATTTGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTAAAACGATTTTTGGAGTGGTTATCCATTTGGGCTACTTTGACTAC	AKVKTIFGVVIHLGYFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	245	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7297   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (245/249)  IGHV3-23*01  47   .....................C....................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  D  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7297   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGATAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  98.4% (245/249)  IGHV3-23*01  137  ..............................G...........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  V  K  T  I  F  G  V  
                    Query_7297   181  AGAACACCCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTTAAAACGATTTTTGGAGTGG  270
V  98.4% (245/249)  IGHV3-23*01  227  .......G....A........................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (20/20)   IGHD3-3*01   6    --------------------------------------------------------------------------................  21

                                      IMGT--------------------->                                  
                                      V  I  H  L  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7297   271  TTATCCATTTGGGCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (20/20)   IGHD3-3*01   22   ....--------------------------------------------------------  25
J  100.0% (47/47)   IGHJ4*02     2    -------------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_43292

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           411     5e-117
IGHD2-21*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	ATTTTGGTGG	ATAGAGATAGAGTTCC	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTC	ARGGFWWIEIEFRMDV	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	74	1	0	98.7
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	106	8	0	93
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	279	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_7298   2    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACC  91
V  94.6% (279/295)  IGHV1-18*01  1    .....T.............................................................................C......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  W  I  S  A  Y  T  G  N  T  K  N 
                    Query_7298   92   GACTATGGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGATGGATCAGCGCTTACACTGGTAATACAAAAAAT  181
V  94.6% (279/295)  IGHV1-18*01  91   AG...........G.....................................A.....................A......C.....CT..  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  V  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_7298   182  GCACAAAAAGTCCAGGGCAGAGTGACCATGACCACAGACACATCCACGAGAACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGAC  271
V  94.6% (279/295)  IGHV1-18*01  181  .....G..GC.............C..........................C...............C.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  G  G  F  W  W  I  E  I  E  F  R  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_7298   272  ACGGCCGTGTATTACTGTGCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTCTGGGGCCAAGGGACCACGGTCACC  361
V  94.6% (279/295)  IGHV1-18*01  271  .........................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  90.0% (9/10)     IGHD2-21*01  6    -----------------------------...G......---------------------------------------------------  15
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------------...................................  53

                                               
                                       V  S  S 
                    Query_7298   362  GTCTCCTCA  370
J  100.0% (44/44)   IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_338028

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     8e-121
IGHD6-19*01                                                                                           16.1    2.6   
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGTGGGGAAACAGA	AGTGGCTG	CCA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCC	ARLRGETEVAANNWFDP	291	341	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	69	5	0	93.2
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	113	1	0	99.1
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	282	11	0	96.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  G  S  L  K  I  S  C  M  G  S  G  Y  T  F  A  
                    Query_7299   4    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGGGTCTCTGAAGATCTCCTGTATGGGATCTGGATACACCTTTGCCG  93
V  96.2% (282/293)  IGHV5-51*03  2    ....G........G...............................A....................A...T..........G....A..A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      G  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  D  T  R  Y  
                    Query_7299   94   GCTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACTCTGATACCAGATACA  183
V  96.2% (282/293)  IGHV5-51*03  92   ............G..............................................A..............................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_7299   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  96.2% (282/293)  IGHV5-51*03  182  ...........................................C..............................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  M  Y  Y  C  A  R  L  R  G  E  T  E  V  A  A  N  N  W  F  D  P  W  G  Q  G  T  L  V  
                    Query_7299   274  CCGCCATGTATTACTGTGCGAGACTTCGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCA  363
V  96.2% (282/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD6-19*01  10   ----------------------------------------........------------------------------------------  17
J  100.0% (50/50)   IGHJ5*02     1    ---------------------------------------------------.......................................  39

                                                 
                                      T  V  S  S 
                    Query_7299   364  CCGTCTCCTCA  374
J  100.0% (50/50)   IGHJ5*02     40   ...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_186879

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           319     2e-89
IGHD3-3*01                                                                                            14.1    8.1  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TGC	GGAGTGG	ACTTATG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGCGGAGTGGACTTATGGACTCC	ARLRSGLMDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	14	7	0	66.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  I  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  N  G 
                    Query_7300   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAACATTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCGGGGAACGGA  90
V  90.8% (227/250)  IGHV4-39*01  49   ...............................G........G..G..G.................................A.....G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  V  S  N  S  G  N  T  Y  Y  N  P  S  L  K  R  R  V  T  V  S  V  D  T  S 
                    Query_7300   91   CTGGAGTGGCTTGGGAGTGTCTCGAACAGTGGTAACACCTACTACAACCCGTCCCTCAAGCGTCGGGTCACCGTATCCGTAGACACGTCC  180
V  90.8% (227/250)  IGHV4-39*01  139  .........A........A...ATT.T.....G.G.........................A....A......A.................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       N  H  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  R  S  G  L  M  D 
                    Query_7300   181  AATCATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTTCTGTGCGAGACTGCGGAGTGGACTTATGGAC  270
V  90.8% (227/250)  IGHV4-39*01  229  ..GA.C.............A......................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   15   -------------------------------------------------------------------------.......----------  21
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7300   271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_186878

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           344     6e-97
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGTCGTC	ATTACGATTTTTGGAGTGGTT	TTGACGCCACGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGTCGTCATTACGATTTTTGGAGTGGTTTTGACGCCACGTACTACTTTGACTTC	ARGRHYDFWSGFDATYYFDF	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  H  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7301   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTCACTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*08  49   .............................................T...A........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  D  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_7301   91   TGGATTGGGTATATCGACTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAGAGC  180
V  95.5% (231/242)  IGHV4-59*08  139  ...............T.T...............A..................................A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       H  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  H  Y  D  F  W  S  G 
                    Query_7301   181  CACTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTTTATTACTGTGCGAGGGGTCGTCATTACGATTTTTGGAGTGGT  270
V  95.5% (231/242)  IGHV4-59*08  229  ..G...........G....G...........................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (21/21)   IGHD3-3*01   3    ----------------------------------------------------------------------....................  22

                                      GT------------------------>                                  
                                       F  D  A  T  Y  Y  F  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_7301   271  TTTGACGCCACGTACTACTTTGACTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  331
D  100.0% (21/21)   IGHD3-3*01   23   .------------------------------------------------------------  23
J  95.8% (46/48)    IGHJ4*02     1    -------------............A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_186877

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_7302   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_7302   91   GAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ...................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_7302   181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7302   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_186876

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           12.2    30   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGACGGGT	TGGCTG	CCC	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGACGGGTTGGCTGCCCGACGAC	ARGTGWLPDD	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  Y  C  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7303   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTACTACTGCAACTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  93.9% (229/244)  IGHV4-59*01  49   ...............................G..........A..........G.G..................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  N  T  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7303   91   TGGATTGGACATATCTACAACACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  93.9% (229/244)  IGHV4-59*01  139  ........GT.......TT...G.....G.............................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  T  G  W  L  P  D  D  W 
                    Query_7303   181  CAGTTCTCCTTGAACCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGACGGGTTGGCTGCCCGACGACTGG  270
V  93.9% (229/244)  IGHV4-59*01  229  .........C....G....G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  12   ------------------------------------------------------------------------......------------  17
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------...T.....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_7303   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.5% (39/40)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_338021

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            332     4e-93
IGHD3-3*01                                                                                            23.8    0.011
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAGTATGGTTCGGGTG	GATTTTCGGAGTGGT	CCCCCTTCTACTTCAG	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGAGTATGGTTCGGGTGGATTTTCGGAGTGGTCCCCCTTCTACTTCAGCGGTTTGGACGTC	ARDEYGSGGFSEWSPFYFSGLDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  H  W  M  S  W  V  R  Q  A  P  G  K  G  P  
                    Query_7304  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTAGTTTTAGTAGCCATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  92.4% (231/250)  IGHV3-7*03  47   ..................................C.CC.........T..........C............................T..  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  S  I  V  Q  D  G  T  K  R  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  G  
                    Query_7304  91   AGTGGGTGGCCAGCATAGTGCAAGATGGAACTAAGAGATATTACGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGGCG  180
V  92.4% (231/250)  IGHV3-7*03  137  ............A....AA...........G.G...A...C..T...........................................C.A  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><---------------------------
                                     E  N  S  L  Y  L  Q  M  N  S  L  R  G  D  D  T  A  V  Y  Y  C  A  R  D  E  Y  G  S  G  G  
                    Query_7304  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGGCGACGACACGGCCGTCTATTACTGTGCGAGAGATGAGTATGGTTCGGGTGGAT  270
V  92.4% (231/250)  IGHV3-7*03  227  ....................................C...G...........G.................--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD3-3*01  8    ---------------------------------------------------------------------------------------...  10

                                     --CDR3-IMGT----------------------------->                                 
                                     F  S  E  W  S  P  F  Y  F  S  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7304  271  TTTCGGAGTGGTCCCCCTTCTACTTCAGCGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
D  93.3% (14/15)    IGHD3-3*01  11   ...T........--------------------------------------------------------------  22
J  97.8% (45/46)    IGHJ6*02    17   ----------------------------....A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_186874

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           369     2e-104
IGHD6-25*01                                                                                           10.3    120   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	TCTTT	CAGCG	TCTGACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCCCAGATCTTTCAGCGTCTGACCACTTTGACTAC	TPDLSASDHFDY	249	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	246	10	0	96.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_7305   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACGCCTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.1% (246/256)  IGHV3-15*01  47   .......T....................................A............G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  C  R  I  N  T  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_7305   91   AGTGGGTTTGCCGTATTAATACCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  96.1% (246/256)  IGHV3-15*01  137  ........G..........A.G....................................................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------CDR3-IMG
                                      D  S  K  N  T  L  Y  L  Q  L  S  S  L  K  T  E  D  T  A  V  Y  Y  C  T  P  D  L  S  A  S  
                    Query_7305   181  ATTCAAAAAACACGCTGTATTTGCAACTGAGCAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCCCAGATCTTTCAGCGTCTG  270
V  96.1% (246/256)  IGHV3-15*01  227  ....................C.....A...A........................................A....--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (5/5)     IGHD6-25*01  9    ---------------------------------------------------------------------------------.....----  13

                                      T------------>                                  
                                      D  H  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_7305   271  ACCACTTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  318
J  97.8% (44/45)    IGHJ4*02     4    ---.......................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_186873

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           330     1e-92
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	GGTAAAGACCCCGGAGGGCGCC	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTAAAGACCCCGGAGGGCGCCTACTTCTCCTACTACGGGATGGACGTC	ARVKTPEGAYFSYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	229	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  D  Y  T  L  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7306   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTCAGTGATTATACTCTGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  92.7% (229/247)  IGHV3-21*01  47   ........................C...................AGC....GCA...............................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  S  S  G  Y  Y  I  Y  Y  A  D  S  V  N  G  R  F  T  I  S  R  D  N  A  
                    Query_7306   91   AGTGGGTCTCATCCGTTAGCAGTAGTGGTTATTACATATACTACGCAGACTCAGTGAACGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.7% (229/247)  IGHV3-21*01  137  ..............A....T......A..AG...........................G...............................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  V  Y  L  Q  M  N  N  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  K  T  P  E  G  A  
                    Query_7306   181  AGAACTCAGTGTATCTGCAAATGAACAACCTGAGAGCCGACGACACGGCTGTTTATTACTGTGCGAGGGTAAAGACCCCGGAGGGCGCCT  270
V  92.7% (229/247)  IGHV3-21*01  227  ........C..................G............G...........G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  91.7% (55/60)    IGHJ6*02     3    -----------------------------------------------------------------------------------------.  3

                                      IMGT--------------------->                                 
                                      Y  F  S  Y  Y  G  M  D  V  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_7306   271  ACTTCTCCTACTACGGGATGGACGTCTGGGGCCAGGGGACCGCGGTCACCGTCTCCTCA  329
J  91.7% (55/60)    IGHJ6*02     4    ...A..A.........T.................A......A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_186872

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           347     7e-98
IGHD1-1*01                                                                                            12.2    33   
IGHJ6*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD1-1*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTGTCGGCCGAACCCTTCTA	ACAACT	CCGGCC	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTGTCGGCCGAACCCTTCTAACAACTCCGGCCACGGTTTGGACGTC	ARDCRPNPSNNSGHGLDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7307   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-11*06  47   ..............................................................A...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  S  T  S  Y  T  K  *  S  D  S  V  K  G  R  S  I  I  S  R  D  N  A  
                    Query_7307   91   AGTGGGTTTCATACATTAGTACTAGTACTAGTTACACAAAGTAATCAGACTCTGTGAAGGGCCGATCCATCATCTCCAGAGATAACGCCA  180
V  94.4% (236/250)  IGHV3-11*06  137  .....................G.....G............C..CG.....................T..C............C.......  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  F  Q  Q  M  N  I  L  R  A  E  A  T  A  V  Y  Y  C  A  R  D  C  R  P  N  P  S  
                    Query_7307   181  AGAACTCACTGTTTCAGCAAATGAATATCCTGAGAGCCGAGGCCACGGCTGTGTATTACTGTGCGAGAGATTGTCGGCCGAACCCTTCTA  270
V  94.4% (236/250)  IGHV3-11*06  227  ............A..T.........C.G..............A...........................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      IMGT--------------------->                                 
                                      N  N  S  G  H  G  L  D  V  W  G  P  G  T  T  V  S  A  P  S 
                    Query_7307   271  ACAACTCCGGCCACGGTTTGGACGTCTGGGGCCCAGGGACCACGGTCTCCGCCCCCTCA  329
D  100.0% (6/6)     IGHD1-1*01   4    ......-----------------------------------------------------  9
J  89.4% (42/47)    IGHJ6*02     16   ------------.....A...............A.............A...T.T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_186871

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           369     2e-104
IGHD2-21*02                                                                                           18.0    0.66  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACTG	GGTGGGGACTACTAT	GGTCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTC	VRRLGGDYYGPFEF	290	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	68	6	0	91.9
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	296	7	6	1	0	85.7
Total	N/A	N/A	294	265	29	0	90.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  E  I  S  C  K  A  Y  G  Y  A  F  N  
                    Query_7308   3    AGGTCCAGCTGGTACAGTCTGGAGCAGAAGTGAAAAAGCCCGGGGAGTCTCTGGAGATCTCCTGTAAGGCTTATGGATACGCCTTTAACG  92
V  90.1% (265/294)  IGHV5-51*01  2    ....G........G..............G........................A...............G..C.......AG.....C.A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  G  W  V  R  Q  K  P  E  K  G  L  D  W  M  G  V  I  Y  P  D  D  L  D  T  T  Y  
                    Query_7308   93   ACTACTGGATCGGCTGGGTGCGCCAGAAGCCCGAGAAAGGCCTGGATTGGATGGGGGTCATCTATCCTGATGACCTTGATACGACATACA  182
V  90.1% (265/294)  IGHV5-51*01  92   G..........................T.....G............G.........A............G....TC......C.G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  N  T  I  Y  L  R  W  S  S  L  K  A  S  D  
                    Query_7308   183  GTCCGTCCTTCCAAGGCCAGGTCACAATCTCAGTCGACAAGTCCATCAACACCATCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  90.1% (265/294)  IGHV5-51*01  182  .C.......................C.......C..............G....GC........A..........................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  V  R  R  L  G  G  D  Y  Y  G  P  F  E  F  W  G  Q  G  T  Q  V  T  V  S  
                    Query_7308   273  CCGCCATGTATTATTGTGTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTCTGGGGCCAGGGAACCCAGGTCACCGTCTCCT  362
V  90.1% (265/294)  IGHV5-51*01  272  .............C....C.....------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  86.7% (13/15)    IGHD2-21*02  11   -----------------------------.....T....G....----------------------------------------------  25
J  93.0% (40/43)    IGHJ4*02     6    --------------------------------------------------.....C.A.................T..............  45

                                         
                                      S  
                    Query_7308   363  CAG  365
J  93.0% (40/43)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_186870

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	221	24	6	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_7309   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.0% (221/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  S  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_7309   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAGCTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.0% (221/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C..A......C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_7309   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.0% (221/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_7309   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_339774

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           377     9e-107
IGHD5-12*01                                                                                           35.3    4e-06 
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAG	GTTCTCTCG	GTGGATATAGGGGCTACGATT	TCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGGTTCTCTCGGTGGATATAGGGGCTACGATTTCCCCTACTACTACTTTATGGACGTC	TRGSLGGYRGYDFPYYYFMDV	249	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	113	1	0	99.1
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	248	7	0	97.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  G  D  Y  A  M  S  W  V  R  Q  V  P  G  K  G  L  
                    Query_7310   1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCAACTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  97.3% (248/255)  IGHV3-49*04  47   ....................................C...................................C.................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  I  S  L  I  R  S  N  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_7310   91   AGTGGATAAGTCTCATTAGAAGCAATGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  97.3% (248/255)  IGHV3-49*04  137  .....G..G..T.............A................................................................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  L  Y  Y  C  T  R  G  S  L  G  G  
                    Query_7310   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCCTGTATTACTGTACTAGAGGTTCTCTCGGTGGAT  270
V  97.3% (248/255)  IGHV3-49*04  227  ........................................................G..................---------------  301
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  95.2% (20/21)    IGHD5-12*01  1    ------------------------------------------------------------------------------------......  6

                                      -----CDR3-IMGT-------------------------->                                 
                                      Y  R  G  Y  D  F  P  Y  Y  Y  F  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7310   271  ATAGGGGCTACGATTTCCCCTACTACTACTTTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
D  95.2% (20/21)    IGHD5-12*01  7    ....T..........-----------------------------------------------------------  21
J  96.4% (53/55)    IGHJ6*02     8    -------------------..........GG...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_339775

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         347     7e-98
IGHD6-13*01                                                                                           16.1    2.3  
IGHJ5*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGTGGAGTTACAACCTGTT	GCAGCTGTTGGTAC	GTCCCGATTCCTT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGTGGAGTTACAACCTGTTGCAGCTGTTGGTACGTCCCGATTCCTTGACCTC	AREVELQPVAAVGTSRFLDL	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  A  T  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7311     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGCCTATGCTACGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  94.4% (236/250)  IGHV3-30-3*01  47   ............................................AG........T..............................G....  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        D  W  V  A  L  I  S  S  D  G  S  D  K  N  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_7311     91   ACTGGGTGGCACTTATATCATCTGATGGAAGCGATAAAAACTACGCAGACTCCGTGAAGGGACGATTCTCCATCTCCAGAGACAATTCCA  180
V  94.4% (236/250)  IGHV3-30-3*01  137  .G.........G.........A..........A.....T......................C......A.....................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------------CD
                                        K  T  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  E  V  E  L  Q  P  V  
                    Query_7311     181  AGACCACGCTGTATCTGCAAATGAGCAGCCTGAGAGCTGAGGACACGGCTGTGTATTTCTGTGCGAGAGAGGTGGAGTTACAACCTGTTG  270
V  94.4% (236/250)  IGHV3-30-3*01  227  ...A....................A................................A............--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  85.7% (12/14)    IGHD6-13*01    8    -----------------------------------------------------------------------------------------.  8

                                        R3-IMGT------------------------>                                  
                                        A  A  V  G  T  S  R  F  L  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7311     271  CAGCTGTTGGTACGTCCCGATTCCTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  85.7% (12/14)    IGHD6-13*01    9    ....A.C......-----------------------------------------------------  21
J  97.5% (39/40)    IGHJ5*02       12   --------------------------....C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_339776

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           296     2e-82
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	216	27	0	88.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_7312   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAGT  93
V  88.9% (216/243)  IGHV4-59*01  50   .....TCC...A.........................C...A..T.........GC....................G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N  
                    Query_7312   94   GGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAATC  183
V  88.9% (216/243)  IGHV4-59*01  140  .......G...A.........G.................A..C.......A.....................TA...A..........C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P  
                    Query_7312   184  AGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCCT  273
V  88.9% (216/243)  IGHV4-59*01  230  ..........G...C....C...........T............G.G....A...........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD7-27*01  4    ----------------------------------------------------------------........------------------  11
J  95.7% (44/46)    IGHJ5*02     6    -----------------------------------------------------------------------------.............  18

                                                                       
                                      W  G  Q  G  A  L  V  S  V  S  S  
                    Query_7312   274  GGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  306
J  95.7% (44/46)    IGHJ5*02     19   ...........A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_339777

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           290     2e-80
IGHD4-17*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GTTGGGTCGGAAGA	TGACTACG	TCTCT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTTGGGTCGGAAGATGACTACGTCTCTCTGGTTCGACCCC	AKLGRKMTTSLWFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	216	31	0	87.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  E  F  A  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  R  G  L  
                    Query_7313   1    GGTCCCTGAGACTCTCCTGTGTTGCCTCTGAATTCGCCTTTGGCGACTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAGGGGACTGG  90
V  87.4% (216/247)  IGHV3-23*01  47   .....................CA.......G....A.....A..AG............C......................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  V  P  V  I  S  G  S  G  N  I  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7313   91   AATGTGTCCCAGTTATTAGTGGAAGTGGCAATATTACAACCTACGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAATTCCA  180
V  87.4% (216/247)  IGHV3-23*01  137  .G..G...T...C.........T.....TGG..GC...TA........................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  K  Y  F  C  A  K  L  G  R  K  M  T  T  
                    Query_7313   181  GGAACACCTTGTATCTACAAATGAACAGCCTGCGAGCCGAGGACACGGCCAAATATTTCTGTGCGAAGTTGGGTCGGAAGATGACTACGT  270
V  87.4% (216/247)  IGHV3-23*01  227  A......GC.......G...............A.................GT.....A.........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD4-17*01  1    ---------------------------------------------------------------------------------........-  8

                                      ---------------->                                  
                                      S  L  W  F  D  P  R  G  Q  G  A  L  V  T  V  S  S  
                    Query_7313   271  CTCTCTGGTTCGACCCCCGGGGCCAGGGAGCCCTGGTCACTGTCTCCTCAG  321
J  93.6% (44/47)    IGHJ5*02     5    ----.............T...........A..........C..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_339771

Length=416
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           428     3e-122
IGHD2-15*01                                                                                           41.1    8e-08 
IGHJ5*02                                                                                              98.7    8e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACAACCCAGCCCCG	ATTGTAGTGGTGGTAGCTGCT	CCGTCGTTT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACAACCCAGCCCCGATTGTAGTGGTGGTAGCTGCTCCGTCGTTTACAACTGGTTCGACCCC	ARTQPSPDCSGGSCSVVYNWFDP	291	359	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	74	1	0	98.7
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	112	2	0	98.2
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	294	284	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  R  G  T  F  G 
                    Query_7314   3    CAGATGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTAGAGGCACCTTCGGC  92
V  96.6% (284/294)  IGHV1-69*06  1    ...G.......................................................................G...........A..  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  A  I  N  W  L  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  L  F  G  T  P  N  Y 
                    Query_7314   93   AACTATGCTATCAACTGGCTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTCTCTTTGGTACACCAAACTAC  182
V  96.6% (284/294)  IGHV1-69*06  91   .G...........G....G..................................................A...........G........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_7314   183  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGTTGAGCAGCCTGAGATCTGAGGAC  272
V  96.6% (284/294)  IGHV1-69*06  181  ..................................................................C.......................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------------------CDR3-IMGT----------------------------->   
                                       T  A  V  Y  Y  C  A  R  T  Q  P  S  P  D  C  S  G  G  S  C  S  V  V  Y  N  W  F  D  P  W 
                    Query_7314   273  ACGGCCGTCTATTACTGTGCGAGAACACAACCCAGCCCCGATTGTAGTGGTGGTAGCTGCTCCGTCGTTTACAACTGGTTCGACCCCTGG  362
V  96.6% (284/294)  IGHV1-69*06  271  ........G...............------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (21/21)   IGHD2-15*01  6    ----------------------------------------.....................-----------------------------  26
J  100.0% (51/51)   IGHJ5*02     1    ----------------------------------------------------------------------....................  20

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_7314   363  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  393
J  100.0% (51/51)   IGHJ5*02     21   ...............................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40814496


Query= Query_339772

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD1-1*01                                                                                            14.1    8.2  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTACCCTA	AACTGGGACG	GACCTTCTGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTACCCTAAACTGGGACGGACCTTCTGCTTTTGACCAC	ARLTLNWDGPSAFDH	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  D  P  M  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_7315   1    ACCCTGTCCCTCACCTGCGCTGTCTCCGGTGACCCCATGACTAGTTATTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  91.4% (222/243)  IGHV4-59*01  49   ..................A.......T....G.T....C.G......C........C........................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  L  S  I  D  T  S  K  N 
                    Query_7315   91   TGGATTGGATATATCTACTACAGTGGGAGCACCAACTACAACCCTTCCCTCAGGAGTCGAGTCACCTTATCGATAGACACGTCCAAGAAC  180
V  91.4% (222/243)  IGHV4-59*01  139  ........G........T..........................C.......A.............A....AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       H  F  S  L  S  P  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  T  L  N  W  D  G  P  S 
                    Query_7315   181  CACTTCTCCCTGAGCCCGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGACTTACCCTAAACTGGGACGGACCTTCT  270
V  91.4% (222/243)  IGHV4-59*01  229  ..G..........AG.T..............................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD1-1*01   6    ------------------------------------------------------------------------......A...--------  15

                                      ----------->                                  
                                       A  F  D  H  W  G  R  G  T  L  V  A  V  S  S  
                    Query_7315   271  GCTTTTGACCACTGGGGCCGGGGAACCCTGGTCGCCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---......T.........A.............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_339773

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           346     2e-97
IGHD6-19*01                                                                                           23.8    0.011
IGHJ1*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AACAGGCA	TATGGCAGTGCCTGGTAC	GACTTC	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACAGGCATATGGCAGTGCCTGGTACGACTTCTACTTTCACCAC	AKQAYGSAWYDFYFHH	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	247	4	4	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  V  S  D  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_7316   1    ACCCTATCCCTCACCTGCACTGTCTCTGGTGCCTCCGTCAGCGATGGTTCTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  94.7% (234/247)  IGHV4-61*01  49   .....G.........................G..........AG....AG........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  T  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7316   91   CTGGAATGGATTGGGTATATCTATTACACTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  94.7% (234/247)  IGHV4-61*01  139  .....G......................G..........A..................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  L  T  A  A  D  T  A  V  Y  Y  C  A  K  Q  A  Y  G  S  A  W 
                    Query_7316   181  AAGAATCAGTTCTCCCTGAAACTGAGGTCTCTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAAACAGGCATATGGCAGTGCCTGG  270
V  94.7% (234/247)  IGHV4-61*01  229  .....C..............G.....C...G....................................-----------------------  295
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  88.9% (16/18)    IGHD6-19*01  4    ---------------------------------------------------------------------------...A......G....  18

                                      GT------------------>                                  
                                       Y  D  F  Y  F  H  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7316   271  TACGACTTCTACTTTCACCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  325
D  88.9% (16/18)    IGHD6-19*01  19   ...----------------------------------------------------  21
J  95.7% (44/46)    IGHJ1*01     7    ---------.....C..G.....................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_130293

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           366     2e-103
IGHD2-2*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TG	GTAGTAGT	GACTACTTTTCTTACCGA	TTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGGTAGTAGTGACTACTTTTCTTACCGATTTTACTCC	ASGSSDYFSYRFYS	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	261	27	0	90.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  D  V  K  K  P  G  S  S  A  K  V  S  C  K  D  S  G  G  T  F  S  S  K
                    Query_7317   1    GCAGCTGGTGCAGTCTGGAGCTGACGTGAAGAAGCCTGGGTCCTCGGCGAAGGTCTCCTGCAAGGACTCTGGAGGCACCTTCAGCAGCAA  90
V  90.6% (261/288)  IGHV1-69*06  6    ..................G.....G......................T.................CT.....................T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        S  I  S  W  A  R  Q  A  P  G  Q  G  L  E  W  M  G  G  L  I  P  L  F  G  T  P  N  Y  A  Q
                    Query_7317   91   GTCTATCAGCTGGGCGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGGGACTCATCCCTCTCTTTGGAACACCTAACTACGCACA  180
V  90.6% (261/288)  IGHV1-69*06  96   TG............T....................................A..GA........A.......T...G.A...........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  R  D  R  V  T  I  T  A  D  K  S  T  G  T  H  Y  M  E  L  S  S  L  R  S  D  D  S  A
                    Query_7317   181  GAAGTTCCGGGACAGAGTCACTATTACTGCGGACAAATCCACGGGCACACACTACATGGAGTTGAGCAGCCTGAGATCTGATGACTCGGC  270
V  90.6% (261/288)  IGHV1-69*06  186  ........A..G.........G.....C...............A.....GC..........C...................G...A....  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  F  C  A  S  G  S  S  D  Y  F  S  Y  R  F  Y  S  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_7317   271  CGTGTATTTCTGTGCGAGTGGTAGTAGTGACTACTTTTCTTACCGATTTTACTCCTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  359
V  90.6% (261/288)  IGHV1-69*06  276  ........A.........-----------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                          
D  100.0% (8/8)     IGHD2-2*01   9    --------------------........-------------------------------------------------------------  16
J  93.0% (40/43)    IGHJ4*02     6    ----------------------------------------------...G...A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_130290

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           382     4e-108
IGHD7-27*01                                                                                           18.0    0.65  
IGHJ3*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD7-27*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GG	AACTGGGGA	TCCGCTTCCCGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAACTGGGGATCCGCTTCCCGGGCTTTTGTTATC	ARGNWGSASRAFVI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	267	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  T  S  G  G  T  F  S  N  Y
                    Query_7318   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACTTCTGGAGGCACCTTCAGCAACTA  90
V  92.1% (267/290)  IGHV1-69*06  6    ................................................................G.....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  Y  W  V  R  Q  A  P  A  Q  G  L  E  W  M  G  G  I  F  P  M  F  D  I  T  N  Y  P  Q
                    Query_7318   91   TGCTATCTACTGGGTGCGACAGGCCCCTGCACAAGGGCTTGAGTGGATGGGAGGCATCTTCCCTATGTTTGATATAACAAATTATCCACA  180
V  92.1% (267/290)  IGHV1-69*06  96   .......AG....................G........................G...A.......C....G..C.G....C..CG....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  L  Q  G  R  V  T  I  T  A  D  K  S  T  T  T  A  Y  M  E  L  T  S  L  R  S  E  D  T  A
                    Query_7318   181  GAGTTTGCAGGGCAGAGTCACCATCACCGCGGACAAATCCACGACCACAGCCTACATGGAGCTGACCAGCCTGAGATCTGAGGACACGGC  270
V  92.1% (267/290)  IGHV1-69*06  186  ..AG..C..............G..T...................G....................G........................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  G  N  W  G  S  A  S  R  A  F  V  I  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_7318   271  CATCTATTACTGTGCGAGAGGGAACTGGGGATCCGCTTCCCGGGCTTTTGTTATCTGGGGCCAAGGGACATTGGTCTCCGTCTCTTCAG  359
V  92.1% (267/290)  IGHV1-69*06  276  .G.G................---------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                       
D  100.0% (9/9)     IGHD7-27*01  3    ----------------------.........----------------------------------------------------------  11
J  93.5% (43/46)    IGHJ3*02     5    -------------------------------------------.......A...................A.....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_130296

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD1-26*01                                                                                           10.3    120  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TGCCCCATATACGCAAAAAACTA	GAGCT	TTTCGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGCCCCATATACGCAAAAAACTAGAGCTTTTCGCCTTGACTAC	ASAPYTQKTRAFRLDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	227	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  F  S  G  D  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7319   1    ACCCTGTCCCTCACCTGCACTTTCTCTGGTGACTCCATCAGTAACTACTACTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  93.8% (227/242)  IGHV4-59*01  49   .....................G.........G...........GT.............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_7319   91   TGGATTGGCTATATCTATTACAGTGGGAACACCAACTACAACCCCTCCCTCAAAAGTCGAGTCACCATTTCAGTAGACACGTCGAAGAAG  180
V  93.8% (227/242)  IGHV4-59*01  139  ........G...................G........................G..............A..............C.....C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  R  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  S  A  P  Y  T  Q  K  T  R  A 
                    Query_7319   181  CAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGTGCCCCATATACGCAAAAAACTAGAGCT  270
V  93.8% (227/242)  IGHV4-59*01  229  .............A......C..................A.......G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  11   -------------------------------------------------------------------------------------.....  15

                                      -------------->                                  
                                       F  R  L  D  Y  W  G  Q  G  S  L  V  T  V  S  A  
                    Query_7319   271  TTTCGCCTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCGCAG  319
J  95.2% (40/42)    IGHJ4*02     7    -------....................A.................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_196095

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  Q  Q  H  P  G  K  G 
                    Query_7320   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCAGCAGCACCCAGGGAAGGGC  90
V  96.8% (240/248)  IGHV4-31*03  49   ..................................C......C............................GC..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7320   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  96.8% (240/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  *  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_7320   181  AAGAACTAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  96.8% (240/248)  IGHV4-31*03  229  ......C.............................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7320   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_130294

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           367     6e-104
IGHD1-26*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GA	GGTGTAGTGGGAGC	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTAC	ARGGVVGAPFDY	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	69	6	0	92
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	46	5	0	90.2
CDR2-IMGT	153	176	24	17	7	0	70.8
FR3-IMGT	177	290	114	105	9	0	92.1
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	265	30	0	89.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  T  A  G  G  S  F  S 
                    Query_7321   3    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGACCGCTGGAGGTAGTTTCAGC  92
V  89.8% (265/295)  IGHV1-69*06  1    .....G.................G...........................................A.G.TT.......C.CC......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  A  I  S  W  M  R  Q  A  P  G  Q  G  L  E  W  M  G  A  I  M  P  L  Y  G  I  G  N  Y 
                    Query_7321   93   AGCTATGCTATCAGTTGGATGCGACAGGCCCCTGGGCAAGGGCTTGAGTGGATGGGAGCAATCATGCCTCTATATGGCATAGGAAACTAC  182
V  89.8% (265/295)  IGHV1-69*06  91   ..............C...G................A......................GG.....C...A.C.T...T.C..C.......  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  K  V  T  I  T  A  D  T  S  T  R  T  A  Y  M  E  L  S  G  L  R  S  A  D 
                    Query_7321   183  GCACAGAAGTTCCAGGGCAAAGTCACGATTACCGCGGACACATCCACGAGGACAGCCTACATGGAGTTGAGTGGCCTGAGATCTGCGGAC  272
V  89.8% (265/295)  IGHV1-69*06  181  ...................G....................A.........C...............C....CA............A....  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  M  Y  Y  C  A  R  G  G  V  V  G  A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_7321   273  ACGGCCATGTATTATTGTGCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTACTGGGGCCAGGGAACTCTGGTCACCGTCTCCCCAG  360
V  89.8% (265/295)  IGHV1-69*06  271  ......G.......C..........---------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                 
D  92.9% (13/14)    IGHD1-26*01  1    ---------------------------...A..........-----------------------------------------------  14
J  95.5% (42/44)    IGHJ4*02     5    --------------------------------------------........................C...............T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_196097

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD6-19*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAC	CTTACGGGACGGG	GCAGTGGCTGG	CCTAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACCTTACGGGACGGGGCAGTGGCTGGCCTACGACTAT	ARPYGTGQWLAYDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  M  S  Y
                    Query_7322   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTATGAGTTA  90
V  93.4% (271/290)  IGHV5-51*01  6    .............................................................................G.....CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  E  T  T  Y  S  P
                    Query_7322   91   TTGGATCGCCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACTCTGAAACCACATACAGCCC  180
V  93.4% (271/290)  IGHV5-51*01  96   C.......G..............T...............................A...................T....G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  T  S  L  K  A  S  D  T  A
                    Query_7322   181  GTCGTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAATACCGCATACCTACAGTGGACAAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (271/290)  IGHV5-51*01  186  ...C...C....................................GC.....C.....G.......GC.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  P  Y  G  T  G  Q  W  L  A  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7322   271  CATGTATTACTGTGCGCGACCTTACGGGACGGGGCAGTGGCTGGCCTACGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.4% (271/290)  IGHV5-51*01  276  ................A...---------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (11/11)   IGHD6-19*01  8    ---------------------------------...........---------------------------------------------  18
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_331547

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           330     1e-92
IGHD3-22*01                                                                                           12.2    31   
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCAT	CTATGA	CC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCATCTATGACCACTACTACGGCTTCGACGTC	ARVIYDHYYGFDV	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	24	17	4	3	70.8
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	249	232	14	3	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  L  A  S  G  F  T  F  S  S  Y  E  F  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7323   1    GGTCCCTGAGACTCTCCTGTCTAGCCTCTGGATTCACCTTCAGTAGTTATGAATTCAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-48*03  47   ....................GC...............................A.G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  Y  I  S  S  T     T  P  I  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_7323   91   AGTGGGTTGCATACATTAGTAGTACC---ACTCCCATACACTACGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  177
V  93.2% (232/249)  IGHV3-48*03  137  ........T...............GTGGT.G.A.....T................................A..................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  V  I  Y  D  H  Y  Y  
                    Query_7323   178  AGAACTCACTGCATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTTCTGTGCGAGAGTCATCTATGACCACTACTACG  267
V  93.2% (232/249)  IGHV3-48*03  227  ...........T........................................T....A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-22*01  7    -------------------------------------------------------------------------......-----------  12
J  92.5% (49/53)    IGHJ6*02     10   ---------------------------------------------------------------------------------.........  18

                                      ---------->                                 
                                      G  F  D  V  W  G  L  G  T  T  V  T  V  S  S 
                    Query_7323   268  GCTTCGACGTCTGGGGCCTAGGGACCACGGTCACCGTCTCCTCA  311
J  92.5% (49/53)    IGHJ6*02     19   .TA.G.............A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_331546

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           277     9e-77
IGHD2-15*01                                                                                           12.2    34   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTATC	ATTGTA	T	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTATCATTGTATTACGGTATGGACGTC	ARGVADDGWRGGRRVSLYYGMDV	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	211	34	0	86.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  H  C  W  T  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_7324   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTTAGTGGTCACTGCTGGACCTGGATTCGCCAGACACCAGGGAAGGGACTGGAA  90
V  86.1% (211/245)  IGHV4-34*01  49   ......................................C......T...A.....G......C......C.C...........G.....G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  M  N  H  K  G  R  T  T  Y  N  P  S  L  M  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7324   91   TGGATTGGTGAGATGAATCACAAAGGCAGGACGACCTACAACCCGTCGCTAATGAGTCGAGTCACCATCTCAGTGGACACGTCCAAGAAT  180
V  86.1% (211/245)  IGHV4-34*01  139  ........G..A..C.....T.GT..A..C..C.A............C..C.A...............A.....A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  L  S  L  R  L  T  S  L  I  A  A  D  T  A  M  Y  Y  C  A  R  G  V  A  D  D  G  W  R  G 
                    Query_7324   181  CAGCTCTCCCTGAGATTGACCTCTTTAATCGCCGCGGACACGGCTATGTATTACTGTGCGAGAGGCGTGGCGGATGACGGGTGGCGGGGG  270
V  86.1% (211/245)  IGHV4-34*01  229  ...T.........AGC...G....G.G.C................G...................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      3-IMGT----------------------------->                                 
                                       G  R  R  V  S  L  Y  Y  G  M  D  V  W  G  Q  G  V  T  V  T  V  S  S 
                    Query_7324   271  GGCAGACGCGTATCATTGTATTACGGTATGGACGTCTGGGGCCAGGGAGTCACGGTCACCGTCTCCTCA  339
D  100.0% (6/6)     IGHD2-15*01  6    --------------......-------------------------------------------------  11
J  91.7% (44/48)    IGHJ6*02     15   ---------------------.......................A..GAC...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_100998

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           352     3e-99
IGHD2-21*01                                                                                           10.3    124  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TCTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTCTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFLQERVYYFDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	236	11	0	95.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_7325   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  95.5% (236/247)  IGHV4-31*03  50   .....TCC...A....................................G.........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_7325   94   TGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCTA  183
V  95.5% (236/247)  IGHV4-31*03  140  ..............T......A.........................C......................C........A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  L  Q  E  
                    Query_7325   184  AGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTTCTCTATTTCTCCAAGAAA  273
V  95.5% (236/247)  IGHV4-31*03  230  .........................C.........................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  22   --------------------------------------------------------------------------.....-----------  26

                                      T------------------>                                  
                                      R  V  Y  Y  F  D  Y  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_7325   274  GAGTCTACTACTTTGACTACCGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  97.9% (47/48)    IGHJ4*02     1    ------..............T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_100999

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         321     7e-90
IGHD2-2*02                                                                                            21.8    0.043
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGGGGGG	TTGTAGTACTTCCAGTTGCCATA	N/A	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGGGGGGTTGTAGTACTTCCAGTTGCCATAACTTCTACGACTACGCTATGGACGTC	ARAGGGCSTSSCHNFYDYAMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  Y  A  L  H  W  V  R  Q  S  P  G  K  G  L  
                    Query_7326     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTACTATGCTCTTCACTGGGTCCGCCAGTCTCCAGGCAAGGGACTGG  90
V  91.2% (227/249)  IGHV3-30-3*01  47   ............................................AG.......A.G...............G.............G....  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  L  I  S  F  D  G  G  V  E  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_7326     91   AGTGGGTGGCACTCATTTCATTTGATGGAGGCGTTGAATACTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  91.2% (227/249)  IGHV3-30-3*01  137  ...........G.T..A....A.......A..AA.A.....................A...........................T....  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><---------------------------
                                        K  K  T  L  Y  L  Q  M  N  S  L  T  S  E  D  T  A  V  Y  Y  C  A  R  A  G  G  G  C  S  T  
                    Query_7326     181  AGAAGACACTGTATCTCCAAATGAACAGCCTGACATCTGAGGACACGGCTGTCTATTACTGTGCGAGAGCGGGGGGGGGTTGTAGTACTT  270
V  91.2% (227/249)  IGHV3-30-3*01  227  ....C..G........G................G.G................G................---------------------  295
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  82.6% (19/23)    IGHD2-2*02     7    -------------------------------------------------------------------------------........G.A  17

                                        -CDR3-IMGT--------------------------->                                 
                                        S  S  C  H  N  F  Y  D  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7326     271  CCAGTTGCCATAACTTCTACGACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  82.6% (19/23)    IGHD2-2*02     18   ....C...T...-----------------------------------------------------------  29
J  94.9% (56/59)    IGHJ6*02       4    ------------...A....T......G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_331543

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           330     1e-92
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  A  L  E 
                    Query_7327   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGCACTGGAG  90
V  93.1% (228/245)  IGHV4-59*08  49   ...........................................G......................................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  F  Y  T  G  T  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7327   91   TGGATCGGGTCTATCTTTTACACTGGGACCACCAACTACGACCCCTCTCTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGAAC  180
V  93.1% (228/245)  IGHV4-59*08  139  .....T....A.....A.....G.....G..........A.......C....................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  V  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  H  R  A  A  A  G  P 
                    Query_7327   181  CAGTTCTCCCTGAGAGTGACCTCTCTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATCCCCATAGAGCAGCAGCTGGCCCC  270
V  93.1% (228/245)  IGHV4-59*08  229  .............AGC...G....G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD6-13*01  7    --------------------------------------------------------------------------............----  18
J  93.2% (41/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_7327   271  TTTGACAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  313
J  93.2% (41/44)    IGHJ4*02     6    ......T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_331541

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            341     5e-96
IGHD2-2*01                                                                                            12.2    32   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATC	TAGTAACACCTG	GCACTCGGGGTTTTGGT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTAGTAACACCTGGCACTCGGGGTTTTGGTTAC	AGHLVTPGTRGFGY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  T  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_7328  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCAGCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  94.3% (232/246)  IGHV4-4*01  49   ........................................G...T................................A........G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  G  G  N  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  S  N 
                    Query_7328  91   GAGTGGATTGGGGAAATCTATCATGGTGGAAACACCAACTACAACCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAC  180
V  94.3% (232/246)  IGHV4-4*01  139  ........................A....G.G......................A..................................G  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  R  L  N  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_7328  181  AACCAGTTCTCCCTGAGGCTGAACTCTCTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATCTAGTAACACCTGGCACTCGG  270
V  94.3% (232/246)  IGHV4-4*01  229  ................A.....G....G...........................G.......A..------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01  13   ----------------------------------------------------------------------.....C..G...--------  24

                                     ----------->                                  
                                      G  F  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7328  271  GGTTTTGGTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (37/37)   IGHJ4*02    12   ---------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_331540

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           400     9e-114
IGHD1-1*01                                                                                            10.3    133   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAACG	GGTAACCCCATATCGCGGC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTAT	ARGTGNPISRLGY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_7329   1    GCAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTA  90
V  94.1% (273/290)  IGHV1-46*01  6    ..................G.C...............................G.....................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  T  G  G  T  N  Y  A  Q
                    Query_7329   91   TTATATGCACTGGGTACGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTACTGGTGGCACAAATTACGCACA  180
V  94.1% (273/290)  IGHV1-46*01  96   C..............G...................................................GG....A......GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  P  T  S  T  V  Y  L  D  L  S  S  L  E  S  E  D  T  A
                    Query_7329   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGCCCACGAGCACAGTCTACTTGGACCTGAGCAGCCTTGAATCTGAGGACACGGC  270
V  94.1% (273/290)  IGHV1-46*01  186  .....................................T.................A....G...........GAG...............  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  G  T  G  N  P  I  S  R  L  G  Y  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_7329   271  CGTTTATTACTGTGCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  356
V  94.1% (273/290)  IGHV1-46*01  276  ...G................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (5/5)     IGHD1-1*01   11   --------------------.....-------------------------------------------------------------  15
J  92.9% (39/42)    IGHJ4*02     7    --------------------------------------------...A...C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_100992

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           290     2e-80
IGHD2-21*01                                                                                           12.2    32   
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGATCGGCTCC	GGTGAT	GGGATTCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGATCGGCTCCGGTGATGGGATTCGTTTTGACTCC	AKGIGSGDGIRFDS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	217	32	0	87.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  V  M  A  W  V  R  H  V  P  G  K  G  L  
                    Query_7330   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCAGGATTCACCTTCAGCAGCTATGTCATGGCCTGGGTCCGACACGTTCCAGGGAAGGGGCTGG  90
V  87.1% (217/249)  IGHV3-23*01  47   ......................A.....T...........T..........C....AG.........C..G.C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  R  G  G  A  A  P  S  T  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_7330   91   AGTGGGTCTCAAGCATTAGTGGACGTGGTGGTGCTGCACCCTCCACAGACTCCGTGAAGGGCCGCTTCAGCATCTCCAGAGACAATTCCG  180
V  87.1% (217/249)  IGHV3-23*01  137  ...........GCT........TA........AGCA..TA..A.G...................G....C...................A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      E  N  T  L  H  L  Q  M  N  S  L  R  V  E  D  T  A  T  Y  Y  C  A  K  G  I  G  S  G  D  G  
                    Query_7330   181  AAAACACCCTGCATCTACAAATGAACAGCCTGAGAGTCGAGGACACGGCCACATATTACTGTGCGAAAGGGATCGGCTCCGGTGATGGGA  270
V  87.1% (217/249)  IGHV3-23*01  227  .G.....G...T....G...................C.............GT.................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-21*01  14   --------------------------------------------------------------------------------......----  19

                                      ------------->                             
                                      I  R  F  D  S  W  G  Q  G  A  L  V  I  V  S
                    Query_7330   271  TTCGTTTTGACTCCTGGGGCCAGGGAGCCCTGGTCATCGTCTC  313
J  92.1% (35/38)    IGHJ4*02     6    -----.......A.............A.........C......  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_100993

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           315     5e-88
IGHD6-19*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAACGGCTGTAT	CAGTGACTGG	CACCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAACGGCTGTATCAGTGACTGGCACCCTTGACTAC	ARDRTAVSVTGTLDY	230	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	24	0	0	100
FR3-IMGT	116	229	114	109	5	0	95.6
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	213	12	0	94.7


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  N  Y  N  S  H  A  L  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_7331   13   GTCTGGATTCAACTACAATAGCCATGCCTTGCACTGGGTCCGCCAGGCTCCGGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  94.7% (213/225)  IGHV3-33*01  72   ...........C..T..G....T...G.A......................A......................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  E  D  S  V  R  G  R  F  S  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_7331   103  TGGAAGTAATAAATACTATGAAGACTCCGTGAGGGGCCGGTTCAGCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAA  192
V  94.7% (213/225)  IGHV3-33*01  162  ....................C...........A......A....C.............................................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------CDR3-IMGT----------------->        
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  T  A  V  S  V  T  G  T  L  D  Y  W  G  Q
                    Query_7331   193  CAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATAGAACGGCTGTATCAGTGACTGGCACCCTTGACTACTGGGGCCA  282
V  94.7% (213/225)  IGHV3-33*01  252  ...C.........................................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  90.0% (9/10)     IGHD6-19*01  9    -----------------------------------------------------------.....G....---------------------  18
J  100.0% (42/42)   IGHJ4*02     7    --------------------------------------------------------------------------................  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_7331   283  GGGAACCCTGGTCACCGTCTCCTCAG  308
J  100.0% (42/42)   IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_100990

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            408     4e-116
IGHD3-22*01                                                                                           44.9    5e-09 
IGHJ4*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATACCTGACCC	ACTATGATAGTAGTGGTTATTAC	CC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATACCTGACCCACTATGATAGTAGTGGTTATTACCCCTACTTTGACTAC	AKYLTHYDSSGYYPYFDY	264	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	77	27	27	0	0	100
FR2-IMGT	78	128	51	50	1	0	98
CDR2-IMGT	129	149	21	21	0	0	100
FR3-IMGT	150	263	114	113	1	0	99.1
CDR3-IMGT (germline)	264	267	4	4	0	0	100
Total	N/A	N/A	267	264	3	0	98.9


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  
                    Query_7332   1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCC  90
V  98.9% (264/267)  IGHV4-4*02   26   ................T.........................................................................  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  S  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  
                    Query_7332   91   GCCAGTCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCA  180
V  98.9% (264/267)  IGHV4-4*02   116  .....C....................................................................................  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  
                    Query_7332   181  CCATATCAGTAGACAAGTCCAAGAACCAGTTCTCCCTAAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAAAT  270
V  98.9% (264/267)  IGHV4-4*02   206  .....................................G.................................................---  292
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A     

                                      ----------------CDR3-IMGT--------------------->                                  
                                      Y  L  T  H  Y  D  S  S  G  Y  Y  P  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7332   271  ACCTGACCCACTATGATAGTAGTGGTTATTACCCCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  351
D  100.0% (23/23)   IGHD3-22*01  6    ---------.......................-------------------------------------------------  28
J  100.0% (47/47)   IGHJ4*02     2    ----------------------------------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_100991

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           336     1e-94
IGHD5-18*01                                                                                           12.2    31   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCCTTTGC	ATACATGTATGG	CCCTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCCTTTGCATACATGTATGGCCCTGGCTAC	ASFAYMYGPGY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	230	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  N  F  S  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7333   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGACTCAACTTTAGCGACTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (230/245)  IGHV3-23*01  47   ............................T...T...C.......AG............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  S  S  K  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  S  
                    Query_7333   91   AGTGGGTCTCAGGTATTAGTGGAAGTGGTAGTAGCAAATACTACGCAGACTCCGTGAAGGGCCGGTTCATCATCTCCAGAGACAATTCCA  180
V  93.9% (230/245)  IGHV3-23*01  137  ............C.........T......G......C................................C....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  A  D  D  T  A  F  Y  Y  C  A  S  F  A  Y  M  Y  G  P  
                    Query_7333   181  AGAACACGGTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCTTTTATTACTGTGCGTCCTTTGCATACATGTATGGCCCTG  270
V  93.9% (230/245)  IGHV3-23*01  227  ........C...............................G.........G.A............-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  83.3% (10/12)    IGHD5-18*01  5    -------------------------------------------------------------------------.....GC.....-----  16

                                      ---->                                  
                                      G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7333   271  GCTACTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  309
J  97.4% (37/38)    IGHJ4*02     11   -...........................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_100997

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            449     3e-128
IGHD6-19*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              110     2e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTGAGTTAG	GTGGCTGG	CCAAAATTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTGAGTTAGGTGGCTGGCCAAAATTTTACTACTACTACGGTATGGACGTC	ARAELGGWPKFYYYYGMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	24	0	0	100
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	113	1	0	99.1
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	291	4	0	98.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_7334   1    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACT  90
V  98.6% (291/295)  IGHV1-3*01   1    .....C.....T...........G..................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y 
                    Query_7334   91   AGCTATGCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGATGGATCAACGCTGGCAATGGTAACACAAAATAT  180
V  98.6% (291/295)  IGHV1-3*01   91   ..........................................................................................  180
                                       S  Y  A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  Q  K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  K  S  E  D 
                    Query_7334   181  TCACAGAAGTTCCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGAAATCTGAAGAC  270
V  98.6% (291/295)  IGHV1-3*01   181  ...............................................................................G..........  270
                                       S  Q  K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  V  Y  Y  C  A  R  A  E  L  G  G  W  P  K  F  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T 
                    Query_7334   271  ACGGCTGTGTATTACTGTGCGAGAGCTGAGTTAGGTGGCTGGCCAAAATTTTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACC  360
V  98.6% (291/295)  IGHV1-3*01   271  .........................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (8/8)     IGHD6-19*01  11   ----------------------------------........------------------------------------------------  18
J  100.0% (57/57)   IGHJ6*02     6    ---------------------------------------------------.......................................  44

                                                        
                                       T  V  T  V  S  S 
                    Query_7334   361  ACGGTCACCGTCTCCTCA  378
J  100.0% (57/57)   IGHJ6*02     45   ..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_331549

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           294     6e-82
IGHD3-16*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCTGCGGACTGG	GATTACG	GTT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCTGCGGACTGGGATTACGGTTACTGGTTTGACCAC	AKAADWDYGYWFDH	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	125	24	17	7	0	70.8
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	230	209	21	0	90.9


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  A  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 
                    Query_7335   15   TGTGCAGCCTCTGGATTCACCTTTAGCGCCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGGTATT  104
V  90.9% (209/230)  IGHV3-23*01  64   ...........................AG...........G............................................C....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  G  S  H  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  S  L 
                    Query_7335   105  AGTGGTGGTTCTCATAATACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTCTCTCTG  194
V  90.9% (209/230)  IGHV3-23*01  154  ......A..GG.GG..GC.................................................................G.A....  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><----------------CDR3-IMGT--------------->   
                                       R  M  N  N  L  R  A  E  D  A  A  L  Y  Y  C  A  K  A  A  D  W  D  Y  G  Y  W  F  D  H  W 
                    Query_7335   195  CGCATGAACAATCTCAGAGCCGAGGACGCGGCCCTATACTACTGTGCGAAGGCTGCGGACTGGGATTACGGTTACTGGTTTGACCACTGG  284
V  90.9% (209/230)  IGHV3-23*01  244  .AA.......GC..G............A.....G....T...........----------------------------------------  293
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  100.0% (7/7)     IGHD3-16*01  8    ---------------------------------------------------------------.......--------------------  14
J  93.8% (45/48)    IGHJ5*02     4    -------------------------------------------------------------------------.......C....C....  20

                                                                     
                                       G  Q  G  I  L  V  T  V  S  S  
                    Query_7335   285  GGCCAGGGAATCCTGGTCACCGTCTCCTCAG  315
J  93.8% (45/48)    IGHJ5*02     21   ..........C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_322088

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*04                                                                                           286     2e-79
IGHD3-3*01                                                                                            21.8    0.045
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAAGCCTCGTGCCTG	GGAGTGGTTAT	GAAGCCATACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGCCTCGTGCCTGGGAGTGGTTATGAAGCCATACCTGACTAC	AKSLVPGSGYEAIPDY	276	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	275	147	104	10	33	70.7
CDR3-IMGT (germline)	276	279	4	4	0	0	100
Total	N/A	N/A	279	233	13	33	83.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_7336   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  83.5% (233/279)  IGHV3-21*04  47   ..............................................C..................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  H  I  Y  Y  G  D  S  V  K  G  R  F  T  Y  Y  A  D  S  V  
                    Query_7336   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAGTCACATATATTATGGAGACTCAGTGAAGGGCCGATTCACCTATTACGCAGACTCAGTGA  180
V  83.5% (233/279)  IGHV3-21*04  137  ................................T.....---------------------------------..C................  193
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I                                   Y  Y  A  D  S  V  

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                      K  G  R  F  T  I  S  R  D  S  S  K  S  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  
                    Query_7336   181  AGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTATATT  270
V  83.5% (233/279)  IGHV3-21*04  194  ...........................ACG......A.T.A............................C...............G....  283
                                      K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-------------------CDR3-IMGT------------------>                                
                                      F  C  A  K  S  L  V  P  G  S  G  Y  E  A  I  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7336   271  TCTGTGCGAAAAGCCTCGTGCCTGGGAGTGGTTATGAAGCCATACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  355
V  83.5% (233/279)  IGHV3-21*04  284  A........----------------------------------------------------------------------------  292
                                      Y  C  A                                                                              
D  100.0% (11/11)   IGHD3-3*01   15   ------------------------...........--------------------------------------------------  25
J  100.0% (39/39)   IGHJ4*02     8    ----------------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_115918

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            382     3e-108
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7337   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_7337   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  98.8% (247/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_7337   181  AGAACTCACTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  98.8% (247/250)  IGHV3-7*01   227  ..............C.......................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7337   271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_37925

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTCG	TATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCGTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_7338   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_7338   91   CTGGAGTGGATCGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTTCCATATCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ...........T......................G..................................A..........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  K  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  S  Y  G  S  G 
                    Query_7338   181  AAGAACAAGTTCTCCCTGAAGCTGACCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTCGTATGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  ......C..................G............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (21/21)   IGHD3-10*01  8    ------------------------------------------------------------------------------............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7338   271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (21/21)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_62029

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           296     2e-82
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	235	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	18	21	4	4	0	0	100
CDR1-IMGT	22	45	24	20	4	0	83.3
FR2-IMGT	46	96	51	51	0	0	100
CDR2-IMGT	97	120	24	22	2	0	91.7
FR3-IMGT	121	234	114	106	8	0	93
Total	N/A	N/A	217	203	14	0	93.5


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_7339   18   GTCTGGATTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  107
V  93.5% (203/217)  IGHV3-33*03  72   ............C..C.....C.....C..............................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  I  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  F  R  D  D  S  K  N  T  L  F  L  Q  M  N
                    Query_7339   108  TGGAATTAAGAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTTCAGAGACGACTCCAAGAACACCCTGTTTCTGCAGATGAA  197
V  93.5% (203/217)  IGHV3-33*03  162  .....G...T........................................C.......A.............G....A......A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------CDR3-IMGT----------->                    
                                        S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  D  P  W  G  Q  G  T  Q  V
                    Query_7339   198  CAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCGACCCCTGGGGCCAGGGAACCCAGGT  287
V  93.5% (203/217)  IGHV3-33*03  252  .........................G.G.....C...-----------------------------------------------------  288
                                        S  L  R  A  E  D  T  A  V  Y  Y  C                                                      
D  90.9% (10/11)    IGHD6-13*01  7    ------------------------------------------....G......-------------------------------------  17
J  97.8% (45/46)    IGHJ5*02     6    ----------------------------------------------------------............................T...  37

                                                    
                                        T  V  S  S  
                    Query_7339   288  CACCGTCTCCTCAG  301
J  97.8% (45/46)    IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_334070

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     8e-121
IGHD2-15*01                                                                                           10.3    134   
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AT	TATTG	AGTGATCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAATTATTGAGTGATCGTGCTTTTGATATC	ARQLLSDRAFDI	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	69	5	0	93.2
CDR1-IMGT	76	99	24	24	0	0	100
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	112	2	0	98.2
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	283	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  D  S  G  Y  S  F  T  
                    Query_7340   2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGATTCTGGATACAGCTTTACCA  91
V  95.9% (283/295)  IGHV5-51*01  2    ....G.....G.......................A..............................A...G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  I  I  F  P  A  D  S  D  A  R  Y  
                    Query_7340   92   GCTACTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGTTGGGGATCATCTTTCCTGCTGACTCTGATGCCAGATACA  181
V  95.9% (283/295)  IGHV5-51*01  92   .............C....................................A............A.....G..........A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_7340   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  95.9% (283/295)  IGHV5-51*01  182  .................................C.............A..........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  M  Y  Y  C  A  R  Q  L  L  S  D  R  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7340   272  CCGCCATGTATTACTGTGCGAGACAATTATTGAGTGATCGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  358
V  95.9% (283/295)  IGHV5-51*01  272  .........................--------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                 
D  100.0% (5/5)     IGHD2-15*01  5    ---------------------------.....-------------------------------------------------------  9
J  100.0% (47/47)   IGHJ3*02     4    ----------------------------------------...............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_334071

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD1-26*01                                                                                           10.3    120  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TGCCCCATATGCGCAAAAAACTA	GAGCT	TTTCGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGCCCCATATGCGCAAAAAACTAGAGCTTTTCGCCTTGACTAC	ASAPYAQKTRAFRLDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	228	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  F  S  G  D  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7341   1    ACCCTGTCCCTCACCTGCACTTTCTCTGGTGACTCCATCAGTAACTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.2% (228/242)  IGHV4-59*01  49   .....................G.........G...........GT.............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_7341   91   TGGATTGGCTATATCTATTACAGTGGGAACACCAACTACAACCCCTCCCTCAAAAGTCGAGTCACCATTTCAGTAGACACGTCGAAGAAG  180
V  94.2% (228/242)  IGHV4-59*01  139  ........G...................G........................G..............A..............C.....C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  R  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  S  A  P  Y  A  Q  K  T  R  A 
                    Query_7341   181  CAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGTGCCCCATATGCGCAAAAAACTAGAGCT  270
V  94.2% (228/242)  IGHV4-59*01  229  .............A......C..................A.......G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  11   -------------------------------------------------------------------------------------.....  15

                                      -------------->                                  
                                       F  R  L  D  Y  G  G  Q  G  S  L  V  T  V  S  A  
                    Query_7341   271  TTTCGCCTTGACTACGGGGGCCAGGGATCCCTGGTCACCGTCTCCGCAG  319
J  92.9% (39/42)    IGHJ4*02     7    -------........T...........A.................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_334072

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTCTACGGCATGGACGTC	ARHGDDSGGYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	268	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  T  K  P  G  E  S  L  K  I  S  C  K  A  P  G  Y  S  F  T  N  Y
                    Query_7342   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGACAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTCCTGGATACAGCTTTACCAATTA  90
V  92.1% (268/291)  IGHV5-51*01  6    .............................A...................................G.T..................GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  V  G  I  M  Y  P  G  D  S  D  T  R  N  S  P
                    Query_7342   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGGTGGGGATCATGTATCCTGGTGACTCCGATACCAGAAATAGCCC  180
V  92.1% (268/291)  IGHV5-51*01  96   ........G.....................................A..........C..............T.........T.C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  R  A  S  A  T  A
                    Query_7342   181  GTCTTTCGAGGGCCACGTCACCGTCTCAGCCGACAAGTCCATCAGCACCGCCTATTTGCAGTGGAGGAGCCTGAGGGCCTCGGCCACCGC  270
V  92.1% (268/291)  IGHV5-51*01  186  ...C...C.A.....G......A...............................CC..........C.......A........A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  F  C  A  R  H  G  D  D  S  G  G  Y  L  Y  Y  F  Y  G  M  D  V  W  G  P  G  T  T  V
                    Query_7342   271  CATATATTTCTGTGCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTCTACGGCATGGACGTCTGGGGCCCGGGGACCACGGT  360
V  92.1% (268/291)  IGHV5-51*01  276  ...G....A............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------........A.....-----------------------------------------------  17
J  93.0% (53/57)    IGHJ6*02     6    ----------------------------------------------.......A......T................AA...........  49

                                                   
                                        T  V  S  S 
                    Query_7342   361  CACCGTCTCCTCA  373
J  93.0% (53/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_334073

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD4-17*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGACA	AACG	GACTACGGTGA	ATATCCCCTTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCCGACAAACGGACTACGGTGAATATCCCCTTCACTAC	ARQTDYGEYPLHY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	6	2	0	75
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  S  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  H
                    Query_7343   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGTCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTAGCACCCA  90
V  93.1% (271/291)  IGHV5-51*01  6    ..................................C...........................................C....C..G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  L  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  R  Y  S  P
                    Query_7343   91   CTGGATCGGCTGGGTGCGCCAGCTGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGAGACTAGATACAGCCC  180
V  93.1% (271/291)  IGHV5-51*01  96   ......................A....................................................T..C...........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  E  L  K  P  S  D  T  A
                    Query_7343   181  GTCCTTCCAAGGCCAAGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTATTTACAGTGGAGCGAACTGAAGCCCTCGGACACCGC  270
V  93.1% (271/291)  IGHV5-51*01  186  ...............G............................G.........CC.G.........AGC......G.............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  Q  T  D  Y  G  E  Y  P  L  H  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_7343   271  CATGTATTATTGTGCCCGACAAACGGACTACGGTGAATATCCCCTTCACTACTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  356
V  93.1% (271/291)  IGHV5-51*01  276  .........C.....GA....-----------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (11/11)   IGHD4-17*01  2    -------------------------...........--------------------------------------------------  12
J  97.4% (38/39)    IGHJ4*02     10   -----------------------------------------------.....................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_114153

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           434     4e-124
IGHD6-13*01                                                                                           12.2    35    
IGHJ3*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGGAAGCGGGCCGCACA	TGGTAC	GC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGGAAGCGGGCCGCACATGGTACGCCTTTTGATATC	AWKRAAHGTPFDI	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	282	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  E  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_7344   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGAGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCACCTA  90
V  98.6% (282/286)  IGHV5-51*01  6    ......................................G...............................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_7344   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.6% (282/286)  IGHV5-51*01  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7344   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.6% (282/286)  IGHV5-51*01  186  ............................................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        I  Y  Y  C  A  W  K  R  A  A  H  G  T  P  F  D  I  W  G  Q  G  T  M  V  S  V  S  S  
                    Query_7344   271  CATTTATTACTGTGCGTGGAAGCGGGCCGCACATGGTACGCCTTTTGATATCTGGGGCCAGGGGACTATGGTCAGCGTCTCTTCAG  356
V  98.6% (282/286)  IGHV5-51*01  276  ...G............----------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                       
D  100.0% (6/6)     IGHD6-13*01  16   ---------------------------------......-----------------------------------------------  21
J  93.3% (42/45)    IGHJ3*02     6    -----------------------------------------...................A.....A.......C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_80322

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           416     2e-118
IGHD3-22*01                                                                                           33.4    2e-05 
IGHJ3*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TC	ACTATGAAAGTAGTGATTATTAC	ACAGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCACTATGAAAGTAGTGATTATTACACAGATGATGCTTTTAATATC	ASHYESSDYYTDDAFNI	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	277	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  A  K  K  P  G  E  S  L  K  I  S  C  K  T  S  G  Y  S  F  T  S  Y
                    Query_7345   1    GCAGCTGGTGCAGTCTGGAGCAGAGGCGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGCTTTACCAGCTA  90
V  96.2% (277/288)  IGHV5-51*03  6    ..........................T.....................................GG........................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  M  E  W  M  G  L  I  Y  P  S  D  P  D  T  T  Y  S  P
                    Query_7345   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCATGGAGTGGATGGGCCTCATCTATCCCAGTGACCCTGATACCACATACAGCCC  180
V  96.2% (277/288)  IGHV5-51*03  96   ........G............................C.............GA..........TG.....T.........G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7345   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (277/288)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  S  H  Y  E  S  S  D  Y  Y  T  D  D  A  F  N  I  W  G  Q  G  T  M  V  T  V
                    Query_7345   271  CATGTATTACTGTGCGAGTCACTATGAAAGTAGTGATTATTACACAGATGATGCTTTTAATATCTGGGGCCAAGGGACAATGGTCACCGT  360
V  96.2% (277/288)  IGHV5-51*03  276  ..................------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  91.3% (21/23)    IGHD3-22*01  6    --------------------.......T.......G.......-----------------------------------------------  28
J  98.0% (49/50)    IGHJ3*02     1    ------------------------------------------------..........G...............................  42

                                              
                                        S  S  
                    Query_7345   361  CTCTTCAG  368
J  98.0% (49/50)    IGHJ3*02     43   ........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_80321

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         372     2e-105
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GCCCTCGGG	ACTATGTTTCGGGGAATTA	CT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGCCCTCGGGACTATGTTTCGGGGAATTACTACAACTGGTTCGACCCC	ARGPRDYVSGNYYNWFDP	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  R  G 
                    Query_7346     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAGGGGC  90
V  97.6% (244/250)  IGHV4-30-4*01  49   ..................A..............................A...................................A....  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7346     91   CTGGAGTGGATTGGGTACATCTATTACAGTGGAAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGATACGTCC  180
V  97.6% (244/250)  IGHV4-30-4*01  139  ................................G..................................................C......  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R  G  P  R  D  Y  V  S 
                    Query_7346     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTGCTGTGCCAGAGGCCCTCGGGACTATGTTTCG  270
V  97.6% (244/250)  IGHV4-30-4*01  229  ..........................................................A...........--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.5% (17/19)    IGHD3-10*01    6    -------------------------------------------------------------------------------......G....  16

                                        -IMGT--------------------->                                  
                                         G  N  Y  Y  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7346     271  GGGAATTACTACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  89.5% (17/19)    IGHD3-10*01    17   ....G...-----------------------------------------------------  24
J  100.0% (51/51)   IGHJ5*02       1    ----------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_334077

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         363     1e-102
IGHD3-10*01                                                                                           12.2    32    
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ATGTACGTACATAAA	GGGGAG	GC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAATGTACGTACATAAAGGGGAGGCTATGGACGTC	ARMYVHKGEAMDV	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_7347     4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCAGTAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  96.8% (240/248)  IGHV4-30-4*01  50   .....TCC...A.....A......................C.......A.........................................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_7347     94   TGGAGTGGATTGGGTACATCTACTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCA  183
V  96.8% (240/248)  IGHV4-30-4*01  140  ......................T...................................................................  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  M  Y  V  H  K  G  E  
                    Query_7347     184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAATGTACGTACATAAAGGGGAGG  273
V  96.8% (240/248)  IGHV4-30-4*01  230  ....................................................................----------------------  297
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01    16   -----------------------------------------------------------------------------------......-  21

                                        ---------->                                 
                                        A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7347     274  CTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  100.0% (43/43)   IGHJ6*02       20   -...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_229255

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           315     5e-88
IGHJ6*02                                                                                              108     8e-28


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGTG	N/A	N/A	TAAACTTCCGCCCGGATCCTCCCTCCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAACTTCCGCCCGGATCCTCCCTCCCACTACTACTACGGTATGGACGTC	VNFRPDPPSHYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  G  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_7348   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCCATGGCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.4% (222/243)  IGHV3-23*01  47   ...........................................C...T...C.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  A  T  G  G  R  K  F  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_7348   91   AGTGGGTCTCGAGTATAAGCGCCACTGGTGGCAGAAAGTTCTACGCAGACTCCGTGAAGGGCCGGCTCACCATCTCCAGAGACAATTCCA  180
V  91.4% (222/243)  IGHV3-23*01  137  ..........AGC...T..T.GT.G......T..C.CA.A.........................T........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  H  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  S  V  N  F  R  P  D  P  P  S  
                    Query_7348   181  AGAACACGCTGCATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACAGTGTAAACTTCCGCCCGGATCCTCCCTCCC  270
V  91.4% (222/243)  IGHV3-23*01  227  ...........T............................G..................T...---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             

                                      GT-------------------->                                 
                                      H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7348   271  ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (56/56)   IGHJ6*02     7    ........................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_334079

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           419     2e-119
IGHD3-16*01                                                                                           12.2    37    
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGA	AATTGGTAACACCTAATTGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTC	ARRGKLVTPNWDYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	278	10	0	96.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_7349   2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAC  91
V  96.5% (278/288)  IGHV1-18*04  7    ...................C.................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  C  Y  N  G  N  T  K  Y  A  L 
                    Query_7349   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGTTGTTACAATGGTAACACAAAGTATGCACTG  181
V  96.5% (278/288)  IGHV1-18*04  97   ...........................................................CGC..................C.......A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  H  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_7349   182  AAGCACCAGGGCAGAGTCACCATGACCACAGACACATCGACGAGCACAGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.5% (278/288)  IGHV1-18*04  187  ....T.................................C..............C....................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------CDR3-IMGT-------------------->                           
                                       V  Y  Y  C  A  R  R  G  K  L  V  T  P  N  W  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_7349   272  GTGTATTACTGTGCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  361
V  96.5% (278/288)  IGHV1-18*04  277  ..................------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD3-16*01  18   -------------------......-----------------------------------------------------------------  23
J  100.0% (50/50)   IGHJ6*02     13   ----------------------------------------------............................................  56

                                            
                                       S  S 
                    Query_7349   362  TCCTCA  367
J  100.0% (50/50)   IGHJ6*02     57   ......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_229257

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-16*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCT	TTACGTTTGGGGGAGCTATG	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTTTACGTTTGGGGGAGCTATGGACTACTTTGACTAC	ARGLFTFGGAMDYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  A  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_7350   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCGCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ...............................G.T..........................................A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  S  T  Y  S  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7350   91   CTGGAGTGGATTGGGTACATCTATTACCGTGGGAGCACGTACTCCAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ...........................A..........C....A..............................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  L  S  V  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  F  T  F  G  G 
                    Query_7350   181  AAGAACCAGTTGTCCGTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTATTGTGCGAGAGGCCTCTTTACGTTTGGGGGA  270
V  96.4% (241/250)  IGHV4-31*03  229  ...........C...C...........................................C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-16*01  10   ----------------------------------------------------------------------------..............  23

                                      GT------------------>                                  
                                       A  M  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7350   271  GCTATGGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  95.0% (19/20)    IGHD3-16*01  24   .T....-------------------------------------------------  29
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_248617

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_7351   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*01  49   .......................................AG....T..............A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7351   91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.0% (227/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  G  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_7351   181  CAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGGCACGGCCGTCTACTATTGTACGAGAGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.0% (227/244)  IGHV4-59*01  229  ...............C...G.................A.........G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_7351   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_229251

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           358     4e-101
IGHD4-17*01                                                                                           18.0    0.61  
IGHJ6*02                                                                                              106     3e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCA	ACGGTGACT	CGGAGGGATTTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAACGGTGACTCGGAGGGATTTGGCTACTACTACGGTATGGACGTC	ARGNGDSEGFGYYYGMDV	246	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	112	2	0	98.2
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  D  S  I  N  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_7352   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCATCAACAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  96.0% (239/249)  IGHV4-31*01  50   .....TCC...A....C.............G........G..........T.......................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  
                    Query_7352   94   TGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACGTCTA  183
V  96.0% (239/249)  IGHV4-31*01  140  ..........................................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  N  G  D  S  E  G  
                    Query_7352   184  AGAACCAGTTCTCCCTGAAGGTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCAACGGTGACTCGGAGGGAT  273
V  96.0% (239/249)  IGHV4-31*01  230  ....................C...G............................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD4-17*01  6    ------------------------------------------------------------------------.........---------  14

                                      IMGT--------------------->                                 
                                      F  G  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7352   274  TTGGCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  100.0% (55/55)   IGHJ6*02     8    ----.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_229250

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           321     7e-90
IGHD3-16*01                                                                                           12.2    32   
IGHJ2*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGGCG	TGGGGG	GATCAAGGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGGCGTGGGGGGATCAAGGGATCCTGGTACTCCGATCTC	ARVRRGGIKGSWYSDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7353   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGACATGAAATGAATTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  91.2% (227/249)  IGHV3-48*03  47   ..............................................TT..........C....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  T  G  S  T  L  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7353   91   AGTGGGTTTCACACATCAGTACTGGTAGTACTCTAATAAATTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  91.2% (227/249)  IGHV3-48*03  137  ...........T....T....G.A..G...G.ACC...T.C................................................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      A  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  F  Y  Y  C  A  R  V  R  R  G  G  I  K  
                    Query_7353   181  CGAATTCACTCTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTTTCTATTACTGTGCGAGAGTCCGGCGTGGGGGGATCAAGG  270
V  91.2% (227/249)  IGHV3-48*03  227  A...C.....G.................C.....................G.T................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------------......--------  22

                                      T------------------>                                  
                                      G  S  W  Y  S  D  L  W  G  R  G  T  L  V  V  V  S  S  
                    Query_7353   271  GATCCTGGTACTCCGATCTCTGGGGCCGTGGCACCCTGGTCGTTGTCTCCTCAG  324
J  94.0% (47/50)    IGHJ2*01     4    ----........T............................AC...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_229253

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*04                                                                                         374     9e-106
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*04	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCGGGTCG	ATGATCGTAGTGGTTATT	CACTTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCGGGTCGATGATCGTAGTGGTTATTCACTTGACTACTTTGACTCC	ARHRVDDRSGYSLDYFDS	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	42	9	0	82.4
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	264	25	0	91.3


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  G  Q  S  G  A  E  V  K  K  P  G  E  P  R  R  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_7354     1    GCAGCTGGGGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGCCTCGGAGGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTA  90
V  91.3% (264/289)  IGHV5-10-1*04  6    ........T..................................T...T..............................C.......G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  T  A  W  A  R  Q  M  P  G  K  G  Q  E  W  R  G  K  M  D  P  V  D  P  Y  I  N  N  S  P
                    Query_7354     91   CTGGACTGCCTGGGCGCGCCAGATGCCAGGGAAAGGCCAGGAGTGGAGGGGGAAGATGGATCCTGTTGACCCTTATATCAACAACAGCCC  180
V  91.3% (264/289)  IGHV5-10-1*04  96   .....TCAG.....T............C..........T........T.....G...T......AG....T......C....T.......  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  S  A
                    Query_7354     181  CTCCTTCCAAGGCCAGGTCACCATCTCAGTTGACAAGTCCATCAGCACTGCCTATCTGCAGTGGAGCAGCCTGAAGGCCTCGGACTCCGC  270
V  91.3% (264/289)  IGHV5-10-1*04  186  G............................C........................C..............................A....  275
                                          S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------------CDR3-IMGT--------------------->                       
                                          M  Y  Y  C  A  R  H  R  V  D  D  R  S  G  Y  S  L  D  Y  F  D  S  W  G  Q  G  T  L  V  T
                    Query_7354     271  GATGTATTACTGTGCGAGACATCGGGTCGATGATCGTAGTGGTTATTCACTTGACTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCAC  360
V  91.3% (264/289)  IGHV5-10-1*04  276  C..................-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  94.4% (17/18)    IGHD3-22*01    9    -----------------------------.....A............-------------------------------------------  26
J  97.9% (47/48)    IGHJ4*02       1    -----------------------------------------------------............A........................  37

                                                   
                                          V  S  S  
                    Query_7354     361  CGTCTCCTCAG  371
J  97.9% (47/48)    IGHJ4*02       38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_229252

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTGTACGAGGCGACTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATGTGTACGAGGCGACTCATCAATATAGTGGCTACATGATTAATGACTAC	GKDVYEATHQYSGYMINDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7355   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAAGTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  E  S  G  A  S  T  N  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7355   91   AATGGGTCTCAGGTATCAGTGAGAGCGGTGCTAGCACAAATCACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  .G..........C...T....GT..T....G.......T.CT................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  I  S  L  R  V  E  D  T  A  V  Y  Y  C  G  K  D  V  Y  E  A  T  H  
                    Query_7355   181  AGAACACGCTGTATCTGCAAATGATCAGCCTGAGAGTCGAGGACACGGCCGTATATTACTGTGGGAAAGATGTGTACGAGGCGACTCATC  270
V  94.0% (235/250)  IGHV3-23*01  227  ........................A...........C..........................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7355   271  AATATAGTGGCTACATGATTAATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_37921

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7356   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ........................................G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_7356   91   TGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ........G...A..T...............................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y 
                    Query_7356   181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............C....C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7356   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_37920

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         367     6e-104
IGHD4-17*01                                                                                           21.8    0.041 
IGHJ5*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGACTACGGTG	GTGACTC	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATGACTACGGTGGTGACTCCAATTGGTTCGACCCC	VRDDYGGDSNWFDP	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	243	8	0	96.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  R  G 
                    Query_7357     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  96.8% (243/251)  IGHV4-30-2*01  49   .....................................................................................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  S  Y  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_7357     91   CTGGAGTGGATTGGGTACATCTATCATAGTGGGAGCTCCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCAATAGACACGTCC  180
V  96.8% (243/251)  IGHV4-30-2*01  139  ....................................A.....................................A...G......G....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  D  D  Y  G  G  D  S 
                    Query_7357     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGTCAGAGATGACTACGGTGGTGACTCC  270
V  96.8% (243/251)  IGHV4-30-2*01  229  .....................................................G.....C....C......-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD4-17*01    1    -----------------------------------------------------------------------...........--------  11
J  97.9% (47/48)    IGHJ5*02       2    -----------------------------------------------------------------------------------------.  2

                                        -------------->                                
                                         N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7357     271  AATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  317
J  97.9% (47/48)    IGHJ5*02       3    ..C............................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_105018

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGGG	AGCAATGGCTGG	GGAAGGTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTATGGACGCC	ARGHRGSNGWGRYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	228	17	6	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_7358   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCAGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  90.8% (228/251)  IGHV4-34*01  49   .......................C..T................------....C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  H  R  G  G  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_7358   91   CTGGAATGGATTGGGGAAATCATTCATCGTGGAGGCACCAACTACAACCCGTCCCTCCAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  90.8% (228/251)  IGHV4-34*01  133  .....G................A....A.....A.......................A................................  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  G  S  N  G 
                    Query_7358   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGGGAGCAATGGC  270
V  90.8% (228/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  R  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_7358   271  TGGGGAAGGTACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  93.8% (45/48)    IGHJ6*02     15   ------------------.............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_324625

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           316     2e-88
IGHD7-27*01                                                                                           12.2    31   
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	CGAAC	CTATCTGGG	AAC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CGAACCTATCTGGGAACCTTTGACTCC	RTYLGTFDS	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	18	12	0	60
FR3-IMGT	135	248	114	109	5	0	95.6
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  R  T  S  G  F  N  F  G  D  Y  A  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_7359   1    GGTCCCTGAGACTCTCCTGTAGAACTTCTGGATTCAACTTTGGTGATTATGCTTTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.7% (225/248)  IGHV3-49*04  47   .....................C.G............C................A...G................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  V  N  K  P  Y  G  V  M  A  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_7359   91   AGTGGGTTGGTTTCATTGTGAACAAACCTTACGGTGTAATGGCCGAATACGCCGCGTCTGTGAAGGGCAGATTCACCATCTCCAGAGATG  180
V  90.7% (225/248)  IGHV3-49*04  137  .......A.........AGA.G....G....T....GG.CAA.A....................A.................A.......  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  K  S  I  A  Y  L  Q  M  D  S  L  K  T  E  D  T  A  M  Y  Y  C  R  T  Y  L  G  T  F  
                    Query_7359   181  ATTCCAAAAGTATCGCCTATCTGCAAATGGACAGCCTGAAAACCGAGGACACAGCCATGTATTACTGTCGAACCTATCTGGGAACCTTTG  270
V  90.7% (225/248)  IGHV3-49*04  227  ..........C..................A..........................G...........----------------------  294
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  88.9% (8/9)      IGHD7-27*01  1    -------------------------------------------------------------------------...A.....--------  9
J  97.7% (43/44)    IGHJ4*02     5    -------------------------------------------------------------------------------------.....  9

                                      ---->                                  
                                      D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7359   271  ACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.7% (43/44)    IGHJ4*02     10   ...A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_324626

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAGGG	AGTAGTGGTTATT	TTAGCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAGGGAGTAGTGGTTATTTTAGCCTC	ARRGSSGYFSL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  K  G  S  D  F  S  F  A  R  N
                    Query_7360   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGATTTCAGTTTTGCCAGGAA  90
V  94.8% (275/290)  IGHV5-51*01  6    ..........................................G............................GA.A...C...A....CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  H  D  S  D  T  R  Y  S  P
                    Query_7360   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTAGAGTGGATGGGGAACATCTATCCTCATGACTCTGATACCAGATACAGCCC  180
V  94.8% (275/290)  IGHV5-51*01  96   .......................................G.............T..........GG........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  T  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7360   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (275/290)  IGHV5-51*01  186  ...................................A.................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        M  Y  Y  C  A  R  R  G  S  S  G  Y  F  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7360   271  CATGTATTATTGTGCGAGACGAGGGAGTAGTGGTTATTTTAGCCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  94.8% (275/290)  IGHV5-51*01  276  .........C..........------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (13/13)   IGHD3-22*01  14   -------------------------.............------------------------------------------  26
J  100.0% (35/35)   IGHJ4*02     14   ---------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_324627

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            353     9e-100
IGHD3-16*01                                                                                           14.1    8.4   
IGHJ5*01                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGC	GTATAATGAT	AAGTCCCCGAATCATA	GGTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGCGTATAATGATAAGTCCCCGAATCATAGGTCCGACTCC	AREAYNDKSPNHRSDS	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  G  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_7361   1    ACCCTGTCCCTCACCTGCGCAGTCTCTGGTGCCTCCATCAGCGGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.6% (237/248)  IGHV4-4*02   49   ....................T..........G..........A...............................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  V  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  R 
                    Query_7361   91   GAGTGGATTGGGGAAATCTATCATGTTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAGG  180
V  95.6% (237/248)  IGHV4-4*02   139  ........................AG........................................................A.....A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  N  D  K  S  P 
                    Query_7361   181  AACCAGTTCTCCCTCAATCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGAGGCGTATAATGATAAGTCCCCG  270
V  95.6% (237/248)  IGHV4-4*02   229  ..............G..G....G...........................G.................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  90.0% (9/10)     IGHD3-16*01  1    -----------------------------------------------------------------------....T.....---------  10

                                      ----------------->                                  
                                       N  H  R  S  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7361   271  AATCATAGGTCCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  95.6% (43/45)    IGHJ5*01     7    -------...T...............A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_277568

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           344     6e-97
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	N/A	CTACGGTGAC	CAAACACACCAGGAGGAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGACTACGGTGACCAAACACACCAGGAGGAGTAC	TTDYGDQTHQEEY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	10	1	0	90.9
CDR1-IMGT	25	48	24	23	1	0	95.8
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	129	30	29	1	0	96.7
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	238	229	9	0	96.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  S  S  G  F  T  F  S  D  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  
                    Query_7362   14   GTGCATCCTCTGGATTCACTTTCAGTGACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTA  103
V  96.2% (229/238)  IGHV3-15*01  65   .....G....................A...............................................................  154
                                         A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  

                                      -------CDR2-IMGT---------><----------------------------------------------------FR3-IMGT---
                                      K  S  K  I  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  S  I  S  R  D  D  S  K  N  T  L  
                    Query_7362   104  AAAGCAAAATTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCAGTATCTCAAGAGACGATTCAAAAAACACACTGT  193
V  96.2% (229/238)  IGHV3-15*01  155  .........C...............................................CC...........T..............G....  244
                                      K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  

                                      -------------------------------------------------><--------------CDR3-IMGT--------------> 
                                      Y  L  Q  M  N  N  L  K  T  E  D  T  A  V  Y  Y  C  T  T  D  Y  G  D  Q  T  H  Q  E  E  Y  
                    Query_7362   194  ATCTGCAAATGAACAACTTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGACTACGGTGACCAAACACACCAGGAGGAGTACT  283
V  96.2% (229/238)  IGHV3-15*01  245  ...............G.C........................................--------------------------------  302
                                      Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                                   
D  100.0% (10/10)   IGHD4-17*01  4    ----------------------------------------------------------..........----------------------  13
J  94.6% (35/37)    IGHJ4*02     12   --------------------------------------------------------------------------------------....  15

                                                                       
                                      W  G  Q  G  A  L  V  T  V  S  S  
                    Query_7362   284  GGGGCCAGGGAGCCCTGGTCACTGTCTCCTCAG  316
J  94.6% (35/37)    IGHJ4*02     16   ...........A..........C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_324621

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           343     2e-96
IGHD3-16*01                                                                                           10.3    117  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAGGTTTCGATA	GGGGG	G	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAGGTTTCGATAGGGGGGGGTTCGACCCC	ARDRGFDRGGFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7363   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  94.7% (232/245)  IGHV4-59*01  49   .......................................A......A..............................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  Y  Y  S  G  S  I  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  M  P  K  N 
                    Query_7363   91   TGGATTGCGTATATCTATTACAGTGGGAGCATCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACATGCCCAAGAAC  180
V  94.7% (232/245)  IGHV4-59*01  139  .......G.......................C...C.....................................T.....C.T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  I  S  L  K  L  S  S  V  T  A  A  N  T  A  V  Y  Y  C  A  R  D  R  G  F  D  R  G  G  F 
                    Query_7363   181  CAGATCTCCCTGAAGTTGAGCTCTGTGACCGCCGCGAACACGGCCGTGTATTACTGTGCGAGAGATAGAGGTTTCGATAGGGGGGGGTTC  270
V  94.7% (232/245)  IGHV4-59*01  229  ...T...........C................T...G............................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -------------------------------------------------------------------------------.....------  22
J  100.0% (45/45)   IGHJ5*02     7    -------------------------------------------------------------------------------------.....  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7363   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (45/45)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_324622

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            325     3e-91
IGHD5-18*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD5-18*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAGGGGGGGACTACC	GATACAG	GGTTGGCTG	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCAGGGGGGGACTACCGATACAGGGTTGGCTGTTGATTAC	ARDQGGTTDTGLAVDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	56	27	25	2	0	92.6
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	17	4	0	81
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  G  S  I  S  S  R  N  W  W  S  W  V  R  Q  T  P  G  K  G  
                    Query_7364   1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCAGCAGCAGGAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGC  90
V  91.6% (229/250)  IGHV4-4*02   47   ..A.....TCC...A...............................T..T........................C...............  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  V  Y  H  S  G  T  A  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  K  S  
                    Query_7364   91   TGGAGTGGATTGGAGAAGTCTATCATAGTGGGACTGCCAACTACAACCCGTCCCTCAAGAGCCGACTCACCATATCAGTGGACAAGTCCT  180
V  91.6% (229/250)  IGHV4-4*02   137  .............G...A...............GCA.........................T...G.............A.........A  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      *  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  Q  G  G  T  T  D  
                    Query_7364   181  AGAACCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCATCTATTACTGTGCGAGAGACCAGGGGGGGACTACCGATA  270
V  91.6% (229/250)  IGHV4-4*02   227  ...................G....G.........................G.G.................--------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD5-18*01  4    --------------------------------------------------------------------------------------....  7

                                      T------------------>                                  
                                      T  G  L  A  V  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_7364   271  CAGGGTTGGCTGTTGATTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  324
D  100.0% (7/7)     IGHD5-18*01  8    ...---------------------------------------------------  10
J  95.2% (40/42)    IGHJ4*02     7    ------------....C.........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_90754

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD3-10*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGCGA	CCGCGGTACGACCAGG	ATGTTCG	AGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGACCGCGGTACGACCAGGATGTTCGAGAATGCTCTTGAGATC	AGDRGTTRMFENALEI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	45	6	0	88.2
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	98	16	0	86
CDR3-IMGT (germline)	241	248	8	6	2	0	75
Total	N/A	N/A	248	215	33	0	86.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  G  V  S  G  G  A  I  S  S  S  H  W  W  N  W  V  R  Q  A  P  G  K  G  L 
                    Query_7365   1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGCGGCGCCATTAGCAGCAGTCACTGGTGGAATTGGGTCCGCCAGGCCCCCGGAAAGGGACTG  90
V  86.7% (215/248)  IGHV4-4*01   49   ...................C.........T...T....C.....T...A.........G.............C....A..G.....G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  Q  I  Y  P  G  G  S  A  N  Y  N  P  S  L  R  S  R  V  A  I  S  L  D  A  S  K 
                    Query_7365   91   GAGTGGATTGGGCAAATCTATCCTGGTGGGAGCGCCAACTACAATCCGTCCCTCAGGAGTCGAGTCGCCATTTCGTTAGACGCGTCCAAG  180
V  86.7% (215/248)  IGHV4-4*01   139  ............G.........A.A........A..........C..........A..........A....A..AG.....AA.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       S  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  G  D  R  G  T  T  R  M  F 
                    Query_7365   181  AGCCAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCTGACACGGCCGTCTATTTTTGTGCGGGCGACCGCGGTACGACCAGGATGTTC  270
V  86.7% (215/248)  IGHV4-4*01   229  .A..............A.C...G...............G...........G....GC......A.A..----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (7/7)     IGHD3-10*02  9    ------------------------------------------------------------------------------------......  14

                                      ----------------->                                  
                                       E  N  A  L  E  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7365   271  GAGAATGCTCTTGAGATCTGGGGTCAAGGGACAATGGTCACCGTTTCCTCAG  322
D  100.0% (7/7)     IGHD3-10*02  15   .---------------------------------------------------  15
J  89.6% (43/48)    IGHJ3*02     3    ----.....T....T........C....................C..T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_105010

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7366   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_7366   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_7366   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7366   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_277565

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            389     2e-110
IGHD3-16*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTCCCCGGAGATACATCTCCGG	GATTACG	ACCCATATCGTC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTCCCCGGAGATACATCTCCGGGATTACGACCCATATCGTCTGGACGTC	ARSSPEIHLRDYDPYRLDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  G  S  V  R  V  S  C  K  A  S  G  Y  T  F  S  A  Y
                    Query_7367   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGGCTCAGTGAGGGTCTCCTGCAAGGCTTCCGGATACACCTTCAGCGCCTA  90
V  93.1% (269/289)  IGHV1-2*04   6    ..................G......................C........A..................T.............C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        H  I  H  W  I  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  D  T  N  Y  T  Q
                    Query_7367   91   TCATATACACTGGATACGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAACCCTAATAGTGGTGACACAAACTATACACA  180
V  93.1% (269/289)  IGHV1-2*04   96   CT....G......G.G.................A................................C.......G..........G....  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  V  R  S  D  D  T  A
                    Query_7367   181  GAAATTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACTGCCTACATGGAGCTGAGCAGGGTGAGATCTGACGACACGGC  270
V  93.1% (269/289)  IGHV1-2*04   186  ...G............................................A.....................C...................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  S  S  P  E  I  H  L  R  D  Y  D  P  Y  R  L  D  V  W  G  Q  G  T  A  V
                    Query_7367   271  CATATATTACTGTGCGAGATCGTCCCCGGAGATACATCTCCGGGATTACGACCCATATCGTCTGGACGTCTGGGGCCAAGGGACCGCGGT  360
V  93.1% (269/289)  IGHV1-2*04   276  .G.G...............-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-16*01  8    -------------------------------------------.......----------------------------------------  14
J  97.6% (40/41)    IGHJ6*02     22   --------------------------------------------------------------.......................A....  49

                                                   
                                        T  V  S  S 
                    Query_7367   361  CACCGTCTCCTCA  373
J  97.6% (40/41)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_105012

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            310     1e-86
IGHD2-21*01                                                                                           12.2    31   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	TGGTGA	AGTATTCCTTGGATC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGGTGAAGTATTCCTTGGATCACTTTGACCAC	ARLVKYSLDHFDH	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  N  D  H  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_7368   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATTACCAATGATCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.2% (222/246)  IGHV4-4*02   49   ..................GC...........G......C.G..G.AG.A.........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  R  S  G  S  T  T  Y  N  P  S  L  Q  S  R  V  A  F  S  V  D  K  S  K 
                    Query_7368   91   GAGTGGATTGGAGAAATCTATCGTAGTGGGAGCACCACTTACAACCCGTCCCTTCAGAGTCGAGTCGCCTTCTCAGTAGACAAGTCCAAG  180
V  90.2% (222/246)  IGHV4-4*02   139  ...........G..........A..............AC..............CA...........A..A.A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  F  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  V  K  Y  S  L  D  H 
                    Query_7368   181  AACCAGTTCTCCCTGAGTCTGAGATCTGTGACCGCCGCCGATACGGCCGTATATTACTGTGCGAGATTGGTGAAGTATTCCTTGGATCAC  270
V  90.2% (222/246)  IGHV4-4*02   229  ................AG.....C..............G..C........G...............------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-21*01  13   -------------------------------------------------------------------......-----------------  18
J  95.6% (43/45)    IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                                  
                                       F  D  H  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_7368   271  TTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  313
J  95.6% (43/45)    IGHJ4*02     6    ......T................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_90758

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           396     2e-112
IGHD1-26*01                                                                                           27.6    9e-04 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTC	ARHGDDSGSYLYYFYGMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	100	14	0	87.7
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	274	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  T  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_7369   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGACAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCA  91
V  92.9% (274/295)  IGHV5-51*01  2    .................................A...................................G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  V  G  I  M  Y  P  G  D  S  D  T  R  Y  
                    Query_7369   92   ATTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGGTGGGGATCATGTATCCTGGTGACTCTGATACCAGATATA  181
V  92.9% (274/295)  IGHV5-51*01  92   GC..........G.....................................A..........C..........................C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  R  G  R  G  A  S  D  
                    Query_7369   182  GCCCGTCTTTCGAGGGCCACGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTATTTGCAGTGGAGGGGCCGGGGGGCCTCGGACA  271
V  92.9% (274/295)  IGHV5-51*01  182  .......C...C.A.....G......................................CC..........CA...T.AA...........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  F  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  P  G  T  
                    Query_7369   272  CCGCCATATATTTCTGTGCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTCTGGGGCCCGGGGACCA  361
V  92.9% (274/295)  IGHV5-51*01  272  .......G....A............-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (14/14)   IGHD1-26*01  4    ---------------------------------..............-------------------------------------------  17
J  93.0% (53/57)    IGHJ6*02     6    --------------------------------------------------.......A......T................AA.......  45

                                                       
                                      T  V  T  V  S  S 
                    Query_7369   362  CGGTCACCGTCTCCTCA  378
J  93.0% (53/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_324628

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           311     4e-87
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCTACGAGGGGAGTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATATCTACGAGGGGAGTCATCAATATAGTGGCTACATGATTAATGACTAC	GKDIYEGSHQYSGYMINDY	237	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	47	4	0	92.2
CDR2-IMGT	99	122	24	19	5	0	79.2
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	244	8	7	1	0	87.5
Total	N/A	N/A	233	216	17	0	92.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  K  Y  A  M  S  W  V  R  Q  T  P  E  K  G  L  E  W  V  S  G  I 
                    Query_7370   12   TGTGCAGCCTCTGGATTCACCTTTAGCAAGTATGCCATGAGTTGGGTCCGCCAGACTCCAGAGAAGGGGCTGGAGTGGGTCTCAGGTATC  101
V  92.7% (216/233)  IGHV3-23*01  64   ............................GC...........C............G......G.......................C...T  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  E  S  G  G  S  A  N  Y  A  D  S  V  K  S  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_7370   102  AGTGAGAGTGGTGGAAGCGCAAACTACGCAGACTCAGTGAAGAGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTG  191
V  92.7% (216/233)  IGHV3-23*01  154  ....GT........T...A..T.............C......G...............................................  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------------CDR3-IMGT------------
                                       Q  M  I  T  L  R  A  E  D  T  A  V  Y  Y  C  G  K  D  I  Y  E  G  S  H  Q  Y  S  G  Y  M 
                    Query_7370   192  CAAATGATCACCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGGGAAAGATATCTACGAGGGGAGTCATCAATATAGTGGCTACATG  281
V  92.7% (216/233)  IGHV3-23*01  244  .......A..G...................................C......-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (13/13)   IGHD5-12*01  5    --------------------------------------------------------------------------.............---  17

                                      ----------->                             
                                       I  N  D  Y  W  G  Q  G  T  L  V  T  V  S
                    Query_7370   282  ATTAATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTC  322
J  100.0% (36/36)   IGHJ4*02     8    -----....................................  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_277561

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           335     4e-94
IGHD1-20*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGATTTGGCA	ATAACTGG	GCCCACTCGAGAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGATTTGGCAATAACTGGGCCCACTCGAGAGTACTATGGTTTGGACGTC	ARDDLAITGPTREYYGLDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_7371   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGGCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-11*01  47   ...................................................................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  M  S  S  S  G  S  I  I  K  Y  A  D  S  V  E  G  R  F  V  M  S  R  D  N  A  
                    Query_7371   91   AGTGGGTCTCACACATGAGTAGTAGTGGTAGTATCATAAAGTATGCAGACTCTGTGGAGGGCCGATTCGTCATGTCCAGGGACAACGCCG  180
V  92.8% (232/250)  IGHV3-11*01  137  .......T...T....T................C....T.C..C............A...........AC...C...............A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      E  N  S  L  Y  L  Q  M  T  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  D  L  A  I  T  G  
                    Query_7371   181  AAAACTCACTGTATCTGCAAATGACCAGTCTAAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAGAGACGATTTGGCAATAACTGGGC  270
V  92.8% (232/250)  IGHV3-11*01  227  .G......................A...C..G....................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-20*01  4    --------------------------------------------------------------------------------........--  11

                                      -IMGT----------------------->                                 
                                      P  T  R  E  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7371   271  CCACTCGAGAGTACTATGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  96.1% (49/51)    IGHJ6*02     12   -----------.....C...A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_105016

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD2-15*01                                                                                           10.3    135   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CGAGAAG	GGTGG	CGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGACACGAGAAGGGTGGCGGGGCGAACGACTAC	VRHEKGGGANDY	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	298	8	6	2	0	75
Total	N/A	N/A	295	275	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P  
                    Query_7372   4    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCCA  93
V  93.2% (275/295)  IGHV5-51*01  2    ....G.....G.............................C........................................GC...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  A  D  S  D  T  R  Y  
                    Query_7372   94   ATTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAACATCTATCCTGCTGACTCTGACACCAGATACA  183
V  93.2% (275/295)  IGHV5-51*01  92   GC.......................................................T...........G.........T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  R  K  A  S  D  
                    Query_7372   184  GTCCGACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCGGAAGGCCTCGGACA  273
V  93.2% (275/295)  IGHV5-51*01  182  .C...T.....C.............................................................C.T..............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                
                                      T  A  V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7372   274  CCGCCGTGTATTATTGTGTCAGACACGAGAAGGGTGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  358
V  93.2% (275/295)  IGHV5-51*01  272  .....A.......C....CG.....------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                               
D  100.0% (5/5)     IGHD2-15*01  14   --------------------------------.....------------------------------------------------  18
J  97.4% (37/38)    IGHJ4*02     9    -----------------------------------------------....................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_105017

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	ATTTCTTAGGG	GCTCGTC	AGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACATTTCTTAGGGGCTCGTCAGGCTTTCACTAC	TFLRGSSGFHY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	101	13	0	88.6
CDR3-IMGT (germline)	249	250	2	2	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  D  L  D  W  V  R  Q  A  S  G  K  G  L  
                    Query_7373   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGATTTGGACTGGGTCCGCCAGGCTTCCGGGAAAGGCCTGG  90
V  90.8% (227/250)  IGHV3-73*01  47   .........A.........................................C.A..C............................G....  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  M  R  T  K  D  D  N  Y  A  T  L  Y  A  A  S  V  R  G  R  F  T  I  S  R  D  
                    Query_7373   91   AGTGGGTTGGCCGTATGAGAACCAAAGATGACAATTACGCGACACTATATGCTGCGTCGGTGAGAGGCAGGTTCACCATCTCCAGAGATG  180
V  90.8% (227/250)  IGHV3-73*01  137  ................T....G.....C.A...G..........GC.................A..........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  N  M  A  Y  L  Q  M  S  G  L  D  T  E  D  T  A  L  Y  F  C  T  F  L  R  G  S  S  
                    Query_7373   181  ATTCAAAGAACATGGCTTATCTGCAAATGAGCGGCCTGGACACCGAGGACACGGCCCTTTACTTCTGTACATTTCTTAGGGGCTCGTCAG  270
V  90.8% (227/250)  IGHV3-73*01  227  ............C...G.............A.A.....A.A...............G.G..T.A......--------------------  296
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------.......--  17

                                      ---------->                                  
                                      G  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7373   271  GCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (43/44)    IGHJ4*02     5    -....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_286339

Length=410
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           375     3e-106
IGHD1-1*01                                                                                            19.9    0.18  
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCGCC	CTGGAACGAC	CCGACCGCCCGATATCCATCCGCGACCAAAATC	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCGCCCTGGAACGACCCGACCGCCCGATATCCATCCGCGACCAAAATCACGGTTTGGACGTC	ARSALERPDRPISIRDQNHGLDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	264	24	0	91.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  Y  T  S  Y 
                    Query_7374   2    CAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTACACCAGCTAT  91
V  91.7% (264/288)  IGHV1-18*01  7    ...................C...........................................................TT.........  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  T  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  R  N  T  E  Y  E  Q 
                    Query_7374   92   GGTATCACCTGGGTGCGACAGACCCCTGGACAAGGGCTTGAGTGGATGGGTTGGATCAGCGCTTACAATCGAAACACAGAGTATGAACAG  181
V  91.7% (264/288)  IGHV1-18*01  97   .......G.............G............................A..................G.T......A.C....C....  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  I  M  T  T  N  A  G  T  T  T  A  Y  M  E  L  R  S  L  R  S  D  A  T  A 
                    Query_7374   182  AACTTGCAGGGCAGAGTCATCATGACCACAAACGCAGGCACGACTACAGCCTACATGGAACTGAGGAGCCTGAGATCTGACGCCACGGCC  271
V  91.7% (264/288)  IGHV1-18*01  187  ..GC.C.............C..........G..A..TC.....GC..............G......................A.......  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------------CDR3-IMGT----------------------------->         
                                       V  Y  Y  C  A  R  S  A  L  E  R  P  D  R  P  I  S  I  R  D  Q  N  H  G  L  D  V  W  G  Q 
                    Query_7374   272  GTATATTACTGTGCGAGATCCGCCCTGGAACGACCCGACCGCCCGATATCCATCCGCGACCAAAATCACGGTTTGGACGTCTGGGGCCAA  361
V  91.7% (264/288)  IGHV1-18*01  277  ..G...............------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (10/10)   IGHD1-1*01   8    ------------------------..........--------------------------------------------------------  17
J  97.9% (46/47)    IGHJ6*02     16   -------------------------------------------------------------------.....A.................  38

                                                              
                                       G  T  T  V  T  V  S  S 
                    Query_7374   362  GGGACCACGGTCACCGTCTCCTCA  385
J  97.9% (46/47)    IGHJ6*02     39   ........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40183344


Query= Query_191988

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           305     3e-85
IGHD3-22*01                                                                                           18.0    0.61 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGAAA	TATGACTATGAT	CTTGGAGACGTGGGTCTCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGAAATATGACTATGATCTTGGAGACGTGGGTCTCCACAACTTTGACTCC	ARAPKYDYDLGDVGLHNFDS	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	219	24	0	90.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  M  S  N  Y  F  W  S  W  I  R  Q  P  P  G  K  R  L  E  
                    Query_7375   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATGAGTAATTACTTCTGGAGCTGGATTCGGCAGCCCCCAGGGAAGAGACTGGAGT  93
V  90.1% (219/243)  IGHV4-59*01  50   .....TCC...A....C....................C....G.....A............C..................G.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  L  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  I  D  T  P  K  N  
                    Query_7375   94   GGATTGGGTATATCTATTATAGTGGACTCACCAAGTACAACCCGTCCCTCAAGAGTCGAGTCAGCATATCAATTGACACGCCCAAGAACC  183
V  90.1% (219/243)  IGHV4-59*01  140  ...................C.....GAG......C........C...................C.......G.A......T.........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      H  F  S  L  K  V  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  A  P  K  Y  D  Y  D  L  G  
                    Query_7375   184  ACTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCATTTATTACTGTGCGAGAGCCCCGAAATATGACTATGATCTTGGAG  273
V  90.1% (219/243)  IGHV4-59*01  230  .G............C.............................G.G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  91.7% (11/12)    IGHD3-22*01  2    -----------------------------------------------------------------------...T........-------  13

                                      T------------------------>                                  
                                      D  V  G  L  H  N  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7375   274  ACGTGGGTCTCCACAACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
J  97.8% (44/45)    IGHJ4*02     4    ---------------.........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_286331

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           338     4e-95
IGHD1-26*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAT	TAGTGGGAGCTACTAC	AGATAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGATTAGTGGGAGCTACTACAGATATTTTGACTAC	ARGISGSYYRYFDY	239	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	21	3	0	87.5
FR3-IMGT	125	238	114	110	4	0	96.5
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	232	224	8	0	96.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  L  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 
                    Query_7376   14   TGTGCAGCCTCTGGATTCACCTTAAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATT  103
V  96.6% (224/232)  IGHV3-48*03  64   .......................C..................................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  S  G  S  L  I  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  E  N  S  L  Y  L 
                    Query_7376   104  AGTAGTAGTGGGAGTCTCATATCCTACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCGAGAACTCACTATATCTG  193
V  96.6% (224/232)  IGHV3-48*03  154  ...........T...AC.....A........................A........................A..........G......  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------------CDR3-IMGT--------------->   
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  I  S  G  S  Y  Y  R  Y  F  D  Y  W 
                    Query_7376   194  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGGATTAGTGGGAGCTACTACAGATATTTTGACTACTGG  283
V  96.6% (224/232)  IGHV3-48*03  244  ....................................................--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (16/16)   IGHD1-26*01  5    --------------------------------------------------------................------------------  20
J  100.0% (43/43)   IGHJ4*02     6    ------------------------------------------------------------------------------............  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_7376   284  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  314
J  100.0% (43/43)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_286330

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           297     8e-83
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGGGA	AGGCTCTTGCCGGCTC	TGGCTGGTAC	AAGGAGGGCAT	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAGGCTCTTGCCGGCTCTGGCTGGTACAAGGAGGGCATTTACTACTCCTACTACGGTATCGACGTC	GKALAGSGWYKEGIYYSYYGIDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	218	28	0	88.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7377   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCACCTATGCCCTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  88.6% (218/246)  IGHV3-30*04  47   ...........................................T.G......TA....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  V  S  F  N  G  N  G  Q  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  D  S  
                    Query_7377   91   AGTGGGTGGCACTTGTTTCGTTTAATGGAAATGGTCAATACTACGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACGATTCCA  180
V  88.6% (218/246)  IGHV3-30*04  137  ...........G..A.A..A.A.G......G.AA.A...................................A...........A......  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  T  T  I  Y  L  E  M  N  D  L  R  D  N  D  T  A  V  Y  F  C  G  K  A  L  A  G  S  G  W  
                    Query_7377   181  AGACCACAATTTATCTGGAAATGAACGACCTGAGAGATAACGACACGGCTGTGTATTTCTGTGGGAAGGCTCTTGCCGGCTCTGGCTGGT  270
V  88.6% (218/246)  IGHV3-30*04  227  ...A...GC.G......C........AG........C.G.G................A.....C..------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD6-19*01  12   ----------------------------------------------------------------------------------........  19

                                      --CDR3-IMGT----------------------------->                                 
                                      Y  K  E  G  I  Y  Y  S  Y  Y  G  I  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7377   271  ACAAGGAGGGCATTTACTACTCCTACTACGGTATCGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
D  100.0% (10/10)   IGHD6-19*01  20   ..------------------------------------------------------------------------  21
J  96.7% (59/61)    IGHJ6*02     2    -------------........A............G.......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_286332

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           338     5e-95
IGHD3-10*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TCCGCGAG	ACTTTGGTTCGGGGA	T	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATCCGCGAGACTTTGGTTCGGGGATCTACGGTATGGACGTC	ARDPRDFGSGIYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  Y  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7378   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCATCTTCAGTTACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-33*01  47   ....................................C.......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  Y  Y  D  G  N  N  E  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7378   91   AGTGGGTGTCATTCATATATTATGATGGAAATAATGAATACTATGCAGACGCCGTGAAGGGACGATTCACCATTTCCAGAGACAACTCCA  180
V  93.2% (233/250)  IGHV3-33*01  137  ........G..G.T....GG..........G....A..............T..........C...........C...........T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  R  D  F  G  S  
                    Query_7378   181  AGAACACACTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGGATCCGCGAGACTTTGGTTCGG  270
V  93.2% (233/250)  IGHV3-33*01  227  .......G........G..................................................A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD3-10*01  6    ------------------------------------------------------------------------------...A........  17

                                      T------------------>                                 
                                      G  I  Y  G  M  D  V  W  G  Q  G  T  P  V  A  V  Y  S 
                    Query_7378   271  GGATCTACGGTATGGACGTCTGGGGCCAAGGGACCCCGGTCGCCGTCTACTCA  323
D  93.3% (14/15)    IGHD3-10*01  18   ...--------------------------------------------------  20
J  93.9% (46/49)    IGHJ6*02     14   ----...............................A.....A......C....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_286335

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           316     2e-88
IGHD2-2*01                                                                                            14.1    8.7  
IGHJ5*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGCTCGTTGTGATAA	TACCATCTGC	CCGAAAAACTTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTCGTTGTGATAATACCATCTGCCCGAAAAACTTGCTGGTTCGCCCCC	ARGLVVIIPSARKTCWFAP	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  D  I  S  I  N  T  G  D  Y  Y  W  S  W  F  R  Q  S  P  Q  K  G 
                    Query_7379   1    ACCCTGTCCCTCACCTGCACTGTCTCTGATATCTCCATCAACACCGGTGATTACTATTGGAGCTGGTTCCGCCAGTCCCCACAGAAGGGC  90
V  90.7% (225/248)  IGHV4-31*03  49   ............................G.GG........G..GT....G......C.........A........CA....GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  F  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S 
                    Query_7379   91   CTGGAATGGATTGGGTACATCTATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAGGAGTCGAGTTAGCATTTCCATAGACACGTCT  180
V  90.7% (225/248)  IGHV4-31*03  139  .....G..................................A.................A...........C...A..AG...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  V  V  I  I  P 
                    Query_7379   181  AAGAACCAGTTCTCCCTGAAGGTGAACTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGGGGGCTCGTTGTGATAATACCA  270
V  90.7% (225/248)  IGHV4-31*03  229  .....................C...G...........................G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.0% (9/10)     IGHD2-2*01   16   -------------------------------------------------------------------------------------.....  20

                                      3-IMGT----------------------->                                  
                                       S  A  R  K  T  C  W  F  A  P  W  G  P  G  T  L  V  S  V  S  S  
                    Query_7379   271  TCTGCCCGAAAAACTTGCTGGTTCGCCCCCTGGGGCCCGGGAACCCTGGTCAGCGTCTCCTCAG  334
D  90.0% (9/10)     IGHD2-2*01   21   G....-----------------------------------------------------------  25
J  93.6% (44/47)    IGHJ5*02     5    -----------------........A...........A..............C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_200215

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD2-2*01                                                                                            23.8    0.012 
IGHJ5*01                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATG	GGATATTGTAGCAGT	GTCATCTGTGATGGACCT	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGATATTGTAGCAGTGTCATCTGTGATGGACCTGACTCC	ARHMGYCSSVICDGPDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  T  F  G  T  Y
                    Query_7380   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTGGCACCTA  90
V  94.8% (276/291)  IGHV5-51*01  6    ....................................C........................A...............G....AC..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  K  Y  S  P
                    Query_7380   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGAGACGAAATACAGTCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ........G..................................................................T..C.G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7380   181  GTCCTTCCGAGGCCAGGTCACCATATCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  ........A...............C....C...............C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  M  G  Y  C  S  S  V  I  C  D  G  P  D  S  W  G  H  G  T  L  V  T  V
                    Query_7380   271  CATGTATTACTGTGCGAGACATATGGGATATTGTAGCAGTGTCATCTGTGATGGACCTGACTCCTGGGGCCACGGAACCCTGGTCACCGT  360
V  94.8% (276/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  93.3% (14/15)    IGHD2-2*01   2    -------------------------...........T...--------------------------------------------------  16
J  97.5% (39/40)    IGHJ5*01     12   ----------------------------------------------------------..............A.................  43

                                              
                                        S  S  
                    Query_7380   361  CTCCTCAG  368
J  97.5% (39/40)    IGHJ5*01     44   ........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_286336

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           341     5e-96
IGHD6-13*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CACG	AGCAGCTGG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACACGAGCAGCTGGATTGACTAC	ARDTSSWIDY	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  V  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_7381   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGTCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  94.7% (231/244)  IGHV4-59*01  50   .....TCC...A..................G...........G...............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  F  Y  T  G  S  T  N  Y  N  P  S  L  K  S  Q  F  T  I  S  V  D  T  S  K  N  
                    Query_7381   94   GGATTGGGTATATCTTTTACACTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCAATTCACCATATCAGTAGACACGTCGAAGAACC  183
V  94.7% (231/244)  IGHV4-59*01  140  ...............A.....G...................................G.G......................C.......  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------CDR3-IMGT--------->    
                                      Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  S  S  W  I  D  Y  W  
                    Query_7381   184  AGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACACGAGCAGCTGGATTGACTACTGGG  273
V  94.7% (231/244)  IGHV4-59*01  230  ..............C...G.............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (9/9)     IGHD6-13*01  10   --------------------------------------------------------------------.........-------------  18
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------------------------------------............  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_7381   274  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (42/42)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_287068

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHD4-17*01                                                                                           21.8    0.043
IGHJ6*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GTTTGGAGGCTCCTTTG	TACGGTGACTA	TGTG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAGGTTTGGAGGCTCCTTTGTACGGTGACTATGTGTACTACTATTACGGTATGGACGTC	AQGLEAPLYGDYVYYYYGMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  G  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  E  G  L  
                    Query_7382   1    GGTCCCTGAGACTCTCCTGTGGAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGGAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-23*01  47   .....................C....................................C.....................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  G  I  S  S  F  G  G  S  T  Y  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7382   91   AGTGGCTCTCAGGTATTAGTAGTTTCGGTGGTAGCACATACTCCGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (231/249)  IGHV3-23*01  137  .....G......C.......G..AGT................A...............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  M  L  F  L  Q  M  N  S  L  S  A  E  D  T  A  I  Y  Y  C  A  Q  G  L  E  A  P  L  Y  
                    Query_7382   181  AGAATATGCTATTTCTGCAAATGAACAGCCTGAGCGCCGAGGACACGGCCATATATTATTGTGCGCAAGGTTTGGAGGCTCCTTTGTACG  270
V  92.8% (231/249)  IGHV3-23*01  227  ....C.C...G.A.....................A...............G.......C......A...---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD4-17*01  5    --------------------------------------------------------------------------------------....  8

                                      DR3-IMGT-------------------------->                                 
                                      G  D  Y  V  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7382   271  GTGACTATGTGTACTACTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  338
D  100.0% (11/11)   IGHD4-17*01  9    .......-------------------------------------------------------------  15
J  96.5% (55/57)    IGHJ6*02     6    -----------........C............................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_287069

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           313     2e-87
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGCCGGTTTACTCG	AGGATCTTTTAGCAGTAGCAGATGC	CACGAAAACGTTCCTTGATC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGCCGGTTTACTCGAGGATCTTTTAGCAGTAGCAGATGCCACGAAAACGTTCCTTGATCAC	AKDAGLLEDLLAVADATKTFLDH	230	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	109	5	0	95.6
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	212	12	0	94.6


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  N  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  I  M  S  Y  D 
                    Query_7383   14   TCTGGATTCACCTTCAATACTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCCATTATGTCATATGAT  103
V  94.6% (212/224)  IGHV3-30*18  73   ................G..GC.....................................................AG....A.........  162
                                       S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  I  N  K  H  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 
                    Query_7383   104  GGAATTAATAAACACTATGCAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAACTCCAAGAACACACTGTATCTGCAAATGAAC  193
V  94.6% (212/224)  IGHV3-30*18  163  ....G.......T..............................C...............T...........G..................  252
                                       G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><-----------------------------CDR3-IMGT---------------
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  A  G  L  L  E  D  L  L  A  V  A  D  A  T  K 
                    Query_7383   194  AGCCTGAGAGCTGAGGACACGGCTGTATATTACTGTGCGAAAGATGCCGGTTTACTCGAGGATCTTTTAGCAGTAGCAGATGCCACGAAA  283
V  94.6% (212/224)  IGHV3-30*18  253  ..........................G.................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  80.0% (20/25)    IGHD2-2*01   1    ----------------------------------------------------------.....A..G...T....C...C...-------  25

                                      -------------->                                  
                                       T  F  L  D  H  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_7383   284  ACGTTCCTTGATCACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  332
J  97.2% (35/36)    IGHJ4*02     13   -------------........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_229693

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           322     2e-90
IGHD2-15*01                                                                                           12.2    31   
IGHJ1*01                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCAGGTCGGG	GGTGGT	N/A	TTCCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCAGGTCGGGGGTGGTTTCCACCAC	AKDQVGGGFHH	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7384   1    GGTCCCTGAGACTCTCCTGTGAAGGCTCTGGATTCACCTTCCGAAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGC  90
V  91.2% (228/250)  IGHV3-30*18  47   .....................C..C................A.T.........................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  S  L  A  V  I  S  Y  D  G  S  N  K  F  Y  A  E  A  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7384   91   AGTCGCTGGCAGTTATTTCATATGATGGAAGTAACAAATTCTATGCAGAGGCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCGA  180
V  91.2% (228/250)  IGHV3-30*18  137  ...G.G..........A.................T....A.........CT.....................................C.  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      R  N  T  L  F  L  Q  I  N  S  V  R  P  E  D  T  A  V  Y  Y  C  A  K  D  Q  V  G  G  G  F  
                    Query_7384   181  GGAACACACTGTTTCTGCAAATCAACAGCGTGAGACCTGAAGACACGGCTGTCTATTACTGTGCGAAAGATCAGGTCGGGGGTGGTTTCC  270
V  91.2% (228/250)  IGHV3-30*18  227  A......G....A.........G......C.....G....G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-15*01  14   --------------------------------------------------------------------------------......----  19
J  93.0% (40/43)    IGHJ1*01     10   --------------------------------------------------------------------------------------....  13

                                      ---->                                  
                                      H  H  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_7384   271  ACCACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  309
J  93.0% (40/43)    IGHJ1*01     14   .G..............C..........C...........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_287062

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           338     4e-95
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGAA	AGTGGTTA	CTA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGAAAGTGGTTACTATGAAGCTTTTGATATC	ARSESGYYEAFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  L  S  S  Y  D  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7385   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCCTCAGCAGCTATGATATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.5% (232/248)  IGHV3-30*04  47   ...................................A..T....T.......C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  I  I  S  Y  D  G  G  N  K  N  Y  A  D  S  V  R  G  R  F  T  L  S  R  D  N  S  
                    Query_7385   91   AGTGGGTGTCAATTATATCATATGATGGAGGAAATAAAAATTACGCAGACTCCGTGAGGGGCCGATTCACCTTGTCCAGGGACAATTCCA  180
V  93.5% (232/248)  IGHV3-30*04  137  ........G..G.................A.T......T.C................A.............A.C.....A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  F  L  Q  M  N  S  L  S  A  E  D  T  A  V  Y  Y  C  A  R  S  E  S  G  Y  Y  E  
                    Query_7385   181  AGAACACGCTGTTTCTGCAAATGAACAGCCTGAGCGCTGAGGACACGGCTGTGTATTACTGTGCGAGATCGGAAAGTGGTTACTATGAAG  270
V  93.5% (232/248)  IGHV3-30*04  227  ............A.....................A.................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-22*01  17   --------------------------------------------------------------------------........--------  24
J  94.0% (47/50)    IGHJ3*02     1    -------------------------------------------------------------------------------------...T.  5

                                      ---------->                                  
                                      A  F  D  I  W  G  P  G  T  M  V  T  V  S  S  
                    Query_7385   271  CTTTTGATATCTGGGGCCCAGGGACAATGGTCACCGTCTCCTCAG  315
J  94.0% (47/50)    IGHJ3*02     6    ..................A.....................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_287060

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           343     2e-96
IGHD2-15*01                                                                                           14.1    9.8  
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	GGCC	GGATATT	CATCTGATGGACGTGAATATATGACCCCGTTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGGGCCGGATATTCATCTGATGGACGTGAATATATGACCCCGTTGTTTGACTTT	SRAGYSSDGREYMTPLFDF	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	287	253	34	0	88.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I  N  Y 
                    Query_7386   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGACGATCTCCTGCCAGGCTTCCGGTTACAGTTTTATCAACTAC  91
V  88.2% (253/287)  IGHV1-18*04  7    .................................................A.G........A.......T.......CC....C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  P  H  K  G  N  T  K  Y  A  Q 
                    Query_7386   92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAGGGGCTCGAGTGGATGGGTTGGATCGGCCCGCACAAAGGTAACACAAAATATGCACAG  181
V  88.2% (253/287)  IGHV1-18*04  97   ........C.......................A.....T...........A......A..G.TT....T...........C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  H  L  D  V  R  N  L  R  S  D  D  T  A 
                    Query_7386   182  AGTTTCCAGGGCAGAGTCACGATGACCACAGACACATTGACGGGCACAGCTCACCTGGACGTGAGGAACCTGCGATCTGACGACACGGCC  271
V  88.2% (253/287)  IGHV1-18*04  187  .AGC................C................CC...A.......CT..A....GC......G....A.................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  S  R  A  G  Y  S  S  D  G  R  E  Y  M  T  P  L  F  D  F  W  G  Q  G  T  P  V 
                    Query_7386   272  GTCTATTACTGTTCGAGGGCCGGATATTCATCTGATGGACGTGAATATATGACCCCGTTGTTTGACTTTTGGGGCCAGGGAACCCCGGTC  361
V  88.2% (253/287)  IGHV1-18*04  277  ..G.........G....-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  100.0% (7/7)     IGHD2-15*01  2    ---------------------.......--------------------------------------------------------------  8
J  90.7% (39/43)    IGHJ4*02     6    ------------------------------------------------------------.......AC................T....  35

                                                   
                                       S  V  S  S  
                    Query_7386   362  TCCGTCTCCTCAG  374
J  90.7% (39/43)    IGHJ4*02     36   A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_287061

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ2*01                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTTGGGCAGTATC	CTATGGTTCGGGGAGTTA	GGTTCGC	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACTTGGGCAGTATCCTATGGTTCGGGGAGTTAGGTTCGCGGTACTTCGATCTC	AKDLGSILWFGELGSRYFDL	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  Y  A  M  D  W  V  R  Q  P  P  G  K  G  L  
                    Query_7387   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACTATGCCATGGACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ..........................................G..G..........AG.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  R  G  D  N  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7387   91   AGTGGGTCTCAGCAATTAGTGGTCGTGGTGATAACACATTTTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  .............T.........A......G..G.....AC.................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  S  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  L  G  S  I  L  W  
                    Query_7387   181  AGAGTACGCTGTATCTGCAAATGGACAGCCTGAGAGCCGAAGACACGGCCGTATATTACTGTGCGAAAGACTTGGGCAGTATCCTATGGT  270
V  94.0% (235/250)  IGHV3-23*01  227  ...AC..................A................G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (18/18)   IGHD3-10*01  7    -----------------------------------------------------------------------------------.......  13

                                      R3-IMGT------------------------>                                  
                                      F  G  E  L  G  S  R  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_7387   271  TCGGGGAGTTAGGTTCGCGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  336
D  100.0% (18/18)   IGHD3-10*01  14   ...........-------------------------------------------------------  24
J  100.0% (48/48)   IGHJ2*01     6    ------------------................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_287066

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*13                                                                                           375     3e-106
IGHD3-3*01                                                                                            43.0    2e-08 
IGHJ5*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*13	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACGG	GGATTGC	GTATTTCGATTTTTGGAGTGGTTAT	GGGGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGGGATTGCGTATTTCGATTTTTGGAGTGGTTATGGGGGGGTGGTTCGACCCC	ARGLRISIFGVVMGGWFDP	263	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	45	1	0	97.8
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	110	4	0	96.5
CDR3-IMGT (germline)	263	268	6	6	0	0	100
Total	N/A	N/A	268	254	14	0	94.8


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  S  F  S  G  F  S  F  N  T  R  G  T  C  V  G  W  F  R
                    Query_7388   1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCAGCTTCTCTGGGTTCTCATTCAACACTAGAGGAACGTGTGTGGGCTGGTTCCG  90
V  94.8% (254/268)  IGHV2-70*13  30   ......................................C................C...G......T....T.......A.....A....  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  A  K  Y  Y  S  T  F  L  K  T  R  L  T
                    Query_7388   91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTGATTGGGATGATGCCAAATACTACAGCACATTTCTGAAGACCAGGCTCAC  180
V  94.8% (254/268)  IGHV2-70*13  120  ............G........................................AT................C..................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  K  D  T  S  K  N  Q  V  V  L  R  M  T  N  M  D  P  M  D  T  A  T  Y  Y  C  A  R  G
                    Query_7388   181  CATTTCCAAGGACACCTCCAAAAACCAGGTGGTCCTTAGAATGACCAACATGGACCCTATGGACACAGCCACGTATTATTGTGCACGGGG  270
V  94.8% (254/268)  IGHV2-70*13  210  ...C..................................C...................G.............................--  297
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                      ----------------CDR3-IMGT----------------------->                                  
                                        L  R  I  S  I  F  G  V  V  M  G  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7388   271  ATTGCGTATTTCGATTTTTGGAGTGGTTATGGGGGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  353
D  96.0% (24/25)    IGHD3-3*01   1    -----.....A...................-----------------------------------------------------  25
J  97.8% (45/46)    IGHJ5*02     6    -------------------------------------.........................................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_287064

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGACAG	ATTGTCGTAGTCCCCGGTGCTA	C	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGACAGATTGTCGTAGTCCCCGGTGCTACCTACGGTATGGACGTC	ARDRQIVVVPGATYGMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  S  S  S  Y  F  W  T  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_7389   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCAGCAGTAGTTACTTCTGGACTTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  90.6% (222/245)  IGHV4-59*01  49   .....................................T...........A.....GC.................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  D  G  S  G  S  P  R  Y  N  P  S  L  K  S  R  V  T  M  S  L  D  T  S  K  N 
                    Query_7389   91   TGGATTGGCTATGTCGATGGCAGTGGGAGTCCCAGGTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCGCTAGACACGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  ........G...A..T..TA.........CA...AC................................A..AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       R  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  Q  I  V  V  V  P  G 
                    Query_7389   181  CGATTCTCCCTGAGGCTGAATTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGACAGATTGTCGTAGTCCCCGGT  270
V  90.6% (222/245)  IGHV4-59*01  229  .AG..........A.....GC............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  81.8% (18/22)    IGHD2-2*01   6    ------------------------------------------------------------------------.....A.....A..A.C.  23

                                      -------------------->                                 
                                       A  T  Y  G  M  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_7389   271  GCTACCTACGGTATGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  324
D  81.8% (18/22)    IGHD2-2*01   24   ....--------------------------------------------------  27
J  98.0% (48/49)    IGHJ6*02     14   -----...............................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_197329

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            341     5e-96
IGHD2-21*01                                                                                           10.3    121  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCG	ATTCC	GTGCCTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGATTCCGTGCCTCCTAC	ARRFRASY	264	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	77	27	20	7	0	74.1
FR2-IMGT	78	128	51	49	2	0	96.1
CDR2-IMGT	129	149	21	16	5	0	76.2
FR3-IMGT	150	263	114	106	8	0	93
CDR3-IMGT (germline)	264	268	5	5	0	0	100
Total	N/A	N/A	268	243	25	0	90.7


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  G  V  S  D  G  S  I  D  S  S  G  W  W  I  W  V  
                    Query_7390   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCGGTGTCTCTGATGGCTCCATCGACTCTAGTGGCTGGTGGATTTGGGTCC  90
V  90.7% (243/268)  IGHV4-4*02   26   ................T....G....................C........G..........AG.AG....AA........G........  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  T  H  H  T  G  T  T  N  Y  N  S  S  L  Q  S  R  V  
                    Query_7390   91   GCCAGCCCCCAGGGAAGGGGTTGGAGTGGATTGGGGAAACCCATCACACTGGGACCACCAACTACAACTCGTCCCTCCAGAGTCGAGTCA  180
V  90.7% (243/268)  IGHV4-4*02   116  ....................C..................T.T....T.G.....G.............C........A............  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  I  S  L  D  K  S  K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  
                    Query_7390   181  CCATATCACTAGACAAGTCCAAGAATCAGTTCTCCCTAAACCTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGCGAGGC  270
V  90.7% (243/268)  IGHV4-4*02   206  ........G................C...........G..G....G.................................C........--  293
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A     

                                      -CDR3-IMGT------>                                
                                      R  F  R  A  S  Y  W  G  Q  G  I  L  V  T  V  S  S
                    Query_7390   271  GATTCCGTGCCTCCTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTC  319
D  100.0% (5/5)     IGHD2-21*01  24   -.....-------------------------------------------  28
J  97.2% (35/36)    IGHJ4*02     11   -------------.................C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_197328

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           367     6e-104
IGHD3-22*01                                                                                           18.0    0.60  
IGHJ3*01                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGAT	TCTACTGGTCGTTATC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATTCTACTGGTCGTTATCCTTTTGATGTC	ARVSREYYDSTGRYPFDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7391   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7391   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.2% (242/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_7391   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATT  270
V  97.2% (242/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD3-22*01  5    --------------------------------------------------------------------------------.........-  13

                                      IMGT--------------------->                                  
                                      S  T  G  R  Y  P  F  D  V  W  G  Q  G  P  I  L  T  V  S  S  
                    Query_7391   271  CTACTGGTCGTTATCCTTTTGATGTCTGGGGCCAAGGGCCAATACTCACCGTCTCTTCAG  330
J  93.3% (42/45)    IGHJ3*01     6    ---------------.......................A....GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_336449

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           327     9e-92
IGHD6-19*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TAGATTTTGGCGAC	AGCAGGGGCTGGTAC	TCTTGG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTAGATTTTGGCGACAGCAGGGGCTGGTACTCTTGGATGGACGTC	AKVDFGDSRGWYSWMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  F  K  D  S  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7392   1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTGGATTCACCTTCAAGGACTCTGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-23*01  47   .....................C..C...............T.GCAG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  A  G  G  G  S  T  I  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  S  
                    Query_7392   91   AGTGGGTCTCAGGTATTAGTGCTGGCGGTGGTAGCACCATCTACGCAGACTCTGTGAAGGGCCGGTTCATCATCTCCAGAGACAATTCCA  180
V  92.0% (229/249)  IGHV3-23*01  137  ............C........G.A.T...........ATA............C................C....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  R  Y  Y  C  A  K  V  D  F  G  D  S  R  
                    Query_7392   181  AGAACACGGTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCAGATATTACTGTGCGAAAGTAGATTTTGGCGACAGCAGGG  270
V  92.0% (229/249)  IGHV3-23*01  227  ........C.........................................GT.................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (14/15)    IGHD6-19*01  7    -----------------------------------------------------------------------------------.....T.  13

                                      GT-------------------->                                 
                                      G  W  Y  S  W  M  D  V  W  G  Q  G  T  T  A  T  V  S  S 
                    Query_7392   271  GCTGGTACTCTTGGATGGACGTCTGGGGCCAAGGGACCACGGCCACCGTTTCCTCA  326
D  93.3% (14/15)    IGHD6-19*01  14   ........------------------------------------------------  21
J  95.2% (40/42)    IGHJ6*02     21   --------------............................T......C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_197320

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           313     2e-87
IGHD5-18*01                                                                                           16.1    2.3  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TA	GATACAGTTAT	ATGCCAATTATTCCCGAGAAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATAGATACAGTTATATGCCAATTATTCCCGAGAATTGGTTCGACCTC	ARDRYSYMPIIPENWFDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  W  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_7393   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACATTCAGTAGACACTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGCCTGG  90
V  90.0% (225/250)  IGHV3-74*01  47   .....................................C........CT........................C............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  S  R  I  N  I  D  G  S  K  T  V  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7393   91   CGTGGGTCTCACGCATAAATATAGATGGGAGTAAGACAGTCTACGCGGACTCCGTGAAGGGCCGCTTCACCATCTCAAGAGACAACGCCA  180
V  90.0% (225/250)  IGHV3-74*01  137  T............T..T....GT..........GC...AG........................A...........C.............  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  D  L  Q  M  T  K  V  T  A  E  D  T  A  V  Y  Y  C  A  R  D  R  Y  S  Y  M  P  
                    Query_7393   181  AGAACACGCTGGATCTACAAATGACCAAGGTGACAGCCGAGGACACGGCTGTCTACTACTGTGCAAGAGATAGATACAGTTATATGCCAA  270
V  90.0% (225/250)  IGHV3-74*01  227  ...........T....G.......A..GTC...G..................G..T..............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD5-18*01  4    ------------------------------------------------------------------------.......C...-------  14

                                      IMGT--------------------->                                  
                                      I  I  P  E  N  W  F  D  L  W  G  Q  G  A  L  V  I  V  S  S  
                    Query_7393   271  TTATTCCCGAGAATTGGTTCGACCTCTGGGGCCAGGGAGCCCTGGTCATCGTCTCCTCAG  330
J  93.5% (43/46)    IGHJ5*02     6    --------------..........C.............A.........C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_197323

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            396     2e-112
IGHD6-6*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	100	14	0	87.7
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	274	21	0	92.9


Alignments

                                     <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S 
                    Query_7394  1    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGC  90
V  92.9% (274/295)  IGHV1-8*02  1    .....G.....G...........G..........................................................C.....C.  90
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                     GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                      S  Y  D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 
                    Query_7394  91   AGCTATGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTAT  180
V  92.9% (274/295)  IGHV1-8*02  91   .............A.........................................................C..................  180
                                      S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                     -----------------------------------------------FR3-IMGT-----------------------------------
                                      A  Q  K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D 
                    Query_7394  181  GCACAGAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGAC  270
V  92.9% (274/295)  IGHV1-8*02  181  ............C............C.......A..A...C.T....A..................C..........G.GAT....G...  270
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                     -----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7394  271  ACGGCCGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  92.9% (274/295)  IGHV1-8*02  271  ........G................---------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    ------------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    ------------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_197325

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ3*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTTCAGAGGCACTT	CTATGACACTGGTGGTTAT	GGGGTC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTTCAGAGGCACTTCTATGACACTGGTGGTTATGGGGTCGATGCTTTTGATGCC	AKDLQRHFYDTGGYGVDAFDA	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_7395   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.8% (227/250)  IGHV3-23*01  47   ..........................................G..............G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  L  D  G  S  G  H  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7395   91   AGTGGGTCTCAGCACTTGATGGCAGTGGTCATAAGACATACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAATTCCA  180
V  90.8% (227/250)  IGHV3-23*01  137  .............TA..AG...T......GG..GC.............................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  V  Y  L  Q  L  D  S  L  G  V  E  D  T  A  L  Y  Y  C  A  K  D  L  Q  R  H  F  Y  
                    Query_7395   181  AGAACACAGTGTACCTGCAATTAGATAGCCTGGGAGTCGAGGACACGGCCTTATATTACTGTGCGAAAGATCTTCAGAGGCACTTCTATG  270
V  90.8% (227/250)  IGHV3-23*01  227  .......GC....T......A.GA.C......A...C.............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  84.2% (16/19)    IGHD3-22*01  7    -------------------------------------------------------------------------------------.....  11

                                      DR3-IMGT-------------------------->                                  
                                      D  T  G  G  Y  G  V  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7395   271  ACACTGGTGGTTATGGGGTCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTGACAGTCTCTTCAG  339
D  84.2% (16/19)    IGHD3-22*01  12   .T.G.A........-------------------------------------------------------  25
J  93.9% (46/49)    IGHJ3*01     2    --------------------.............T.....................C..C..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_197324

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           391     5e-111
IGHD2-2*01                                                                                            27.6    8e-04 
IGHJ6*02                                                                                              112     6e-29 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TT	TACCAGCTGCTATG	TC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTACCAGCTGCTATGTCCTACTACTACTACGGTATGGACGTC	ARDLPAAMSYYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	250	0	0	100


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                     Query_7396   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  100.0% (250/250)  IGHV3-64*01  47   ..........................................................................................  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  
                     Query_7396   91   AATATGTTTCAGCTATTAGTAGTAATGGGGGTAGCACATATTATGCAAACTCTGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  100.0% (250/250)  IGHV3-64*01  137  ..........................................................................................  226
                                       E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                       K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R  D  L  P  A  A  M  S  
                     Query_7396   181  AGAACACGCTGTATCTTCAAATGGGCAGCCTGAGAGCTGAGGACATGGCTGTGTATTACTGTGCGAGAGATTTACCAGCTGCTATGTCCT  270
V  100.0% (250/250)  IGHV3-64*01  227  ......................................................................--------------------  296
                                       K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)    IGHD2-2*01   16   ------------------------------------------------------------------------..............----  29
J  100.0% (58/58)    IGHJ6*02     5    ----------------------------------------------------------------------------------------..  6

                                       GT-------------------->                                 
                                       Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                     Query_7396   271  ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (58/58)    IGHJ6*02     7    ........................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_197327

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           327     9e-92
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGACTAC	AG	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGACTACAGCAATTGGGTCGACCCC	ARDSGDYSNWVDP	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	230	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  V  S  S  G  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  R 
                    Query_7397   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCGTCAGTAGTGGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGAGG  90
V  91.6% (230/251)  IGHV4-61*01  49   ...................C...........G.........C...................G.........................G.A  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  G  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7397   91   CTGGAGTGGATTGGTTATATCTATAACGGAGGGAGCACCAATTATAATCCCTCCCTCAAAAGTCGAGTCACCATATCAGTAGACACATCC  180
V  91.6% (230/251)  IGHV4-61*01  139  ..............G.........T..A.T...........C..C..C...........G..........................G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  S  G  D  Y  S  N 
                    Query_7397   181  AAGAACCAGCTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCATATATTATTGTGCGAGAGATTCCGGTGACTACAGCAAT  270
V  91.6% (230/251)  IGHV4-61*01  229  .........T...........C...G.........................G.G.....C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (10/10)   IGHD4-17*01  7    --------------------------------------------------------------------------..........------  16
J  94.0% (47/50)    IGHJ5*02     2    --------------------------------------------------------------------------------------...C  5

                                      ----------->                                  
                                       W  V  D  P  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_7397   271  TGGGTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  316
J  94.0% (47/50)    IGHJ5*02     6    ...T......................................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_197326

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            442     2e-126
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	287	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_7398   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  98.6% (287/291)  IGHV1-2*04   6    ..................G.............AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_7398   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.6% (287/291)  IGHV1-2*04   96   ..........................................................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_7398   181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  98.6% (287/291)  IGHV1-2*04   186  ..........................................................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W  G  Q
                    Query_7398   271  CGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGGGGCCA  360
V  98.6% (287/291)  IGHV1-2*04   276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------------------....A...........................  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_7398   361  AGGGACCACGGTCACCGTCTCCTCA  385
J  98.2% (56/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_304943

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           352     3e-99
IGHD3-16*01                                                                                           18.0    0.65 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	286	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	70	4	0	94.6
CDR1-IMGT	79	102	24	17	7	0	70.8
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	285	114	95	13	6	83.3
CDR3-IMGT (germline)	286	291	6	6	0	0	100
Total	N/A	N/A	293	261	26	6	89.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P  
                    Query_7399   5    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCC  94
V  89.1% (261/293)  IGHV5-51*03  2    ..G........................................................T.....A....T..........GC..TA..A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      R  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  
                    Query_7399   95   GTTATTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACA  184
V  89.1% (261/293)  IGHV5-51*03  92   .C..C........C.......................................................G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D  
                    Query_7399   185  GTCCGGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACA  268
V  89.1% (261/293)  IGHV5-51*03  182  .C...T.....C.A...................C...C........CAGCACC.C...............C..C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S  
                    Query_7399   269  CTGCCATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCTT  358
V  89.1% (261/293)  IGHV5-51*03  272  .C.....G........T......-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  91.7% (11/12)    IGHD3-16*01  18   ------------------------........T...------------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    -------------------------------------------......T......G.................A...............  47

                                         
                                      S  
                    Query_7399   359  CAG  361
J  94.0% (47/50)    IGHJ3*01     48   ...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_304942

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHD3-9*01                                                                                            12.2    31    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGA	ATATTT	CCCACGAGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGACGAATATTTCCCACGAGGCTTTCAGTAC	VRDEYFPRGFQY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7400   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGGCTACTGGATGCACTGGGTCCGCCAAGCACCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-74*01  47   ............................................A............................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  I  I  D  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7400   91   TGTGGGTCTCACGTATTAATAGTGATGGGAGTATCATAGACTCCGCGGATTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-74*01  137  .................................G..C.AG..A......C........................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  E  Y  F  P  R  G  
                    Query_7400   181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGTAAGAGACGAATATTTCCCACGAGGCT  270
V  96.0% (240/250)  IGHV3-74*01  227  .......G.......................................................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-9*01   9    -------------------------------------------------------------------------......-----------  14
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  Q  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7400   271  TTCAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  95.5% (42/44)    IGHJ4*02     7    ..G.C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_332892

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-22*01                                                                                           25.7    0.003
IGHJ5*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGGGGCGCGCCC	GTATTACTTTGATAGT	CATAGGCCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCGGGGGCGCGCCCGTATTACTTTGATAGTCATAGGCCTTTCGACTCC	ARAGARPYYFDSHRPFDS	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  I  R  Q  P  A  G  R  G  L  E 
                    Query_7401   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGATCCGGCAGCCCGCAGGGAGGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*01  49   ..........................................A.............................C......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  S  K  N 
                    Query_7401   91   TGGATTGGGTATATGTATTACAGTGGTAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCCTATCAGTAGACACGTCCAAGAAC  180
V  95.9% (234/244)  IGHV4-59*01  139  ..............C...........G.......................................A.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       L  F  S  L  K  L  F  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  A  R  P  Y  Y  F  D 
                    Query_7401   181  CTGTTCTCCCTGAAGCTGTTCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGCGGGGGCGCGCCCGTATTACTTTGAT  270
V  95.9% (234/244)  IGHV4-59*01  229  .A................AG........................................A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.8% (15/16)    IGHD3-22*01  1    -----------------------------------------------------------------------------........A....  13

                                      -------------------->                                  
                                       S  H  R  P  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_7401   271  AGTCATAGGCCTTTCGACTCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  93.8% (15/16)    IGHD3-22*01  14   ...----------------------------------------------------  16
J  95.3% (41/43)    IGHJ5*01     9    ------------.................A...A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_74815

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            310     1e-86
IGHD6-19*01                                                                                           12.2    33   
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	GGGACACCCAGAGATGGC	GCAGTCGCT	TCGGGAAGGAAGCGGTCCTCATCCCGGGGGCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGGGACACCCAGAGATGGCGCAGTCGCTTCGGGAAGGAAGCGGTCCTCATCCCGGGGGCCTC	VRGHPEMAQSLREGSGPHPGGL	237	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	105	9	0	92.1
CDR3-IMGT (germline)	237	241	5	4	1	0	80
Total	N/A	N/A	230	214	16	0	93


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  A  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  N  I 
                    Query_7402   12   TGTGCAGCCTCTGGATTCACGTTTAGTGCCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGGCAACATA  101
V  93.0% (214/230)  IGHV3-7*03   64   ....................C......AG.....................................................C.......  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       K  Q  D  G  G  D  K  Y  Y  L  G  S  V  K  G  R  F  T  I  S  R  D  N  V  N  N  S  L  Y  L 
                    Query_7402   102  AAGCAAGATGGAGGTGACAAATACTATTTGGGCTCTGTGAAGGGCCGATTCACCATATCCAGAGACAACGTCAACAACTCACTGTATCTG  191
V  93.0% (214/230)  IGHV3-7*03   154  ............A....G.........G...A........................C.............C...G...............  243
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------------------------CDR3-IMGT-------
                                       Q  M  N  N  V  R  A  E  D  T  A  V  Y  Y  C  V  R  G  H  P  E  M  A  Q  S  L  R  E  G  S 
                    Query_7402   192  CAAATGAACAACGTGAGAGCCGAGGACACGGCCGTCTATTACTGCGTGAGGGGACACCCAGAGATGGCGCAGTCGCTTCGGGAAGGAAGC  281
V  93.0% (214/230)  IGHV3-7*03   244  ..........G.C......................G........T.C...----------------------------------------  293
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  88.9% (8/9)      IGHD6-19*01  8    --------------------------------------------------------------------.....G...-------------  16

                                      -------------------->                                  
                                       G  P  H  P  G  G  L  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_7402   282  GGTCCTCATCCCGGGGGCCTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  336
J  97.1% (34/35)    IGHJ4*02     14   --------------------......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_304946

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*03                                                                                           302     3e-84
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GGACG	ATATCAGCACCTGGTA	AG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGGGACGATATCAGCACCTGGTAAGGACTAC	VRGTISAPGKDY	237	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	17	7	0	70.8
FR3-IMGT	123	236	114	106	8	0	93
CDR3-IMGT (germline)	237	243	7	6	1	0	85.7
Total	N/A	N/A	231	212	19	0	91.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  V  
                    Query_7403   13   GTGCAGCCTCCGGATTCACCTTCAGTACCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTTTGGGTCTCACGTGTGG  102
V  91.8% (212/231)  IGHV3-74*03  65   ..........T................G.............................................G............A.TA  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      D  G  D  G  R  I  T  Q  Y  A  D  S  V  K  G  R  F  T  M  S  R  D  N  A  K  N  T  L  Y  L  
                    Query_7403   103  ATGGTGATGGACGTATCACACAGTACGCGGACTCCGTGAAGGGCCGATTCACCATGTCCAGAGACAACGCCAAGAACACACTGTATCTGG  192
V  91.8% (212/231)  IGHV3-74*03  155  ..A.......GA...G....AC.................................C.......................G.........C  244
                                      N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------CDR3-IMGT------------>          
                                      D  L  N  S  L  R  T  E  D  T  A  V  Y  Y  C  V  R  G  T  I  S  A  P  G  K  D  Y  W  G  Q  
                    Query_7403   193  ATTTGAACAGTCTGAGAACCGAGGACACGGCTGTGTATTACTGTGTAAGAGGGACGATATCAGCACCTGGTAAGGACTACTGGGGCCAGG  282
V  91.8% (212/231)  IGHV3-74*03  245  .AA..............G...........................C.....---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  87.5% (14/16)    IGHD6-13*01  5    --------------------------------------------------------...G.....G......------------------  20
J  100.0% (40/40)   IGHJ4*02     9    --------------------------------------------------------------------------................  24

                                                              
                                      G  T  L  V  T  V  S  S  
                    Query_7403   283  GAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (40/40)   IGHJ4*02     25   ........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_332896

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           380     1e-107
IGHD3-16*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACAAGCGGGCGGCACC	TTTGGGG	CGAGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTAC	ARGQAGGTFGASDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  S  F  N  D  Y 
                    Query_7404   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAATGAAGGTCTCCTGCAAGGCTTCCGGTTACAGCTTTAACGACTAT  91
V  92.0% (266/289)  IGHV1-18*01  7    .............................................G......................T.......C.....C.AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  M  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  A  Y  N  G  N  T  K  Y  S  E 
                    Query_7404   92   GGTATCACTTGGATGCGACAGGCCCCTGGACAGGGGCCTGAGTGGATGGGATGGATCAGCGCATATAATGGTAACACAAAGTATTCAGAG  181
V  92.0% (266/289)  IGHV1-18*01  97   .......GC...G...................A....T........................T..C..............C...G..C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  L  Q  G  R  L  I  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_7404   182  AGGCTCCAGGGCAGACTCATCATGACCACAGACACATCCACGAGCACAGCCTACATGGAATTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.0% (266/289)  IGHV1-18*01  187  .A.............G...C.......................................GC.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  G  Q  A  G  G  T  F  G  A  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7404   272  GTCTATTATTGTGCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  92.0% (266/289)  IGHV1-18*01  277  ..G.....C..........---------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD3-16*01  15   ------------------------------------.......---------------------------------------------  21
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_74811

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           360     1e-101
IGHD3-16*01                                                                                           12.2    34    
IGHJ5*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GCCGCGAAAATCGGTCTTTGGACTACTTATCCC	TGGGGG	GGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCCGCGAAAATCGGTCTTTGGACTACTTATCCCTGGGGGGGGCGACTGGTTCGACCCC	ARGPRKSVFGLLIPGGGDWFDP	240	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	237	7	0	97.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_7405   4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  97.1% (237/244)  IGHV4-34*01  50   .....TCC...A..............................................................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_7405   94   GGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAACC  183
V  97.1% (237/244)  IGHV4-34*01  140  ...........................................G.............................A................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------------CDR3-
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  K  S  V  F  G  L  
                    Query_7405   184  AGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGCCGCGAAAATCGGTCTTTGGACTAC  273
V  97.1% (237/244)  IGHV4-34*01  230  ...................C............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          

                                      IMGT--------------------------->                                  
                                      L  I  P  G  G  G  D  W  F  D  P  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_7405   274  TTATCCCTGGGGGGGGCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  339
D  100.0% (6/6)     IGHD3-16*01  17   -------......-----------------------------------------------------  22
J  97.9% (47/48)    IGHJ5*02     4    ------------------................................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_332898

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           377     9e-107
IGHD2-15*01                                                                                           37.2    1e-06 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGACTCCC	GGATATTGTCGTGGTGGTAGGTGCT	CCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGACTCCCGGATATTGTCGTGGTGGTAGGTGCTCCGGCTACTACTACGGTTTGGACGTC	ARDRTPGYCRGGRCSGYYYGLDV	244	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	246	5	0	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_7406   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.0% (246/251)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S 
                    Query_7406   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.0% (246/251)  IGHV4-31*03  139  ..........................................................A.......G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       E  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  R  T  P  G  Y  C 
                    Query_7406   181  GAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCATATATTACTGTGCGAGAGATCGGACTCCCGGATATTGT  270
V  98.0% (246/251)  IGHV4-31*03  229  A..................................................G.G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.0% (23/25)    IGHD2-15*01  2    ---------------------------------------------------------------------------------.........  10

                                      ---CDR3-IMGT----------------------------->                                 
                                       R  G  G  R  C  S  G  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7406   271  CGTGGTGGTAGGTGCTCCGGCTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  345
D  92.0% (23/25)    IGHD2-15*01  11   A..........C....-----------------------------------------------------------  26
J  98.2% (54/55)    IGHJ6*02     8    --------------------.............A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_291102

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           361     5e-102
IGHJ3*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TCTTCATCCGAGGGGTCCGGCCCCC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTCATCCGAGGGGTCCGGCCCCCGATGCTTTTGACATT	ARDLHPRGPAPDAFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	95	19	0	83.3
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	261	30	0	89.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  I  S  C  K  A  S  G  Y  T  F  T  K  Y
                    Query_7407   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCATCTGGATACACCTTCACCAAATA  90
V  89.7% (261/291)  IGHV1-46*01  6    ..................G.................................G.................................GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  L  H  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  L  I  N  P  S  G  G  I  T  A  Y  A  Q
                    Query_7407   91   CTATCTTCACTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGTTGGGATTAATAAACCCTAGTGGTGGTATCACAGCGTACGCACA  180
V  89.7% (261/291)  IGHV1-46*01  96   ....A.G.............................G.........A.....A....C................G....AGC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  L  T  M  S  R  D  T  S  T  S  T  V  Y  I  D  P  S  S  L  T  S  A  D  T  A
                    Query_7407   181  GAAGTTCCAGGGAAGACTCACCATGAGCAGGGACACGTCCACTTCTACAGTCTACATCGACCCGAGCAGCCTGACCTCTGCGGACACGGC  270
V  89.7% (261/291)  IGHV1-46*01  186  ............C...G.........C...............GAGC...........G..G.T...........GA....A.........  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  S  A  R  D  L  H  P  R  G  P  A  P  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S
                    Query_7407   271  CGTATACTACAGTGCGAGAGATCTTCATCCGAGGGGTCCGGCCCCCGATGCTTTTGACATTTGGGGCCAAGGGACAATGGTCACCGTCTC  360
V  89.7% (261/291)  IGHV1-46*01  276  ...G..T...T..........---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
J  95.9% (47/49)    IGHJ3*02     2    ----------------------------------------------...........T..C.............................  45

                                           
                                        S  
                    Query_7407   361  TTCAG  365
J  95.9% (47/49)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_304949

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            420     7e-120
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	G	GGGTAT	GACGCTCCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGTATGACGCTCCGTTTGAGTAC	ARGGYDAPFEY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_7408   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTA  90
V  96.2% (280/291)  IGHV1-8*01   6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  N  W  V  R  Q  A  T  G  Q  G  L  V  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_7408   91   TTATATCAACTGGGTGCGGCAGGCCACAGGACAAGGGCTTGTCTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACA  180
V  96.2% (280/291)  IGHV1-8*01   96   .G................A........T.............AG...............................................  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  V  T  G  D  T  S  I  S  T  V  Y  M  E  L  S  S  L  K  S  E  D  T  A
                    Query_7408   181  GAAGTTCCAGGGCAGAGTCACCGTGACCGGGGACACCTCCATAAGCACAGTCTACATGGAGCTGAGCAGCCTGAAATCTGAGGACACGGC  270
V  96.2% (280/291)  IGHV1-8*01   186  ......................A.....A..A..................C.......................G...............  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        V  Y  Y  C  A  R  G  G  Y  D  A  P  F  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7408   271  CGTGTATTACTGTGCGAGAGGGGGGTATGACGCTCCGTTTGAGTACTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  350
V  96.2% (280/291)  IGHV1-8*01   276  .....................-----------------------------------------------------------  296
                                        V  Y  Y  C  A  R  G                                                           
D  100.0% (6/6)     IGHD6-13*01  1    ----------------------......----------------------------------------------------  6
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------.....C....................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_304948

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAAC	TATTACTATGGTTCGGGG	GCCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAACTATTACTATGGTTCGGGGGCCCACTTTGACTAC	ARGNYYYGSGAHFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	42	9	0	82.4
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  G  G  L  S  L  R  W  G  R  Q  P  P  G  K  G 
                    Query_7409   1    ACCCTGTCCCTCACCTGCACTGTTTCTGGTGGCTCCATTAAGAGTGGCGGTTTATCATTGAGGTGGGGCCGCCAGCCCCCAGGGAAGGGG  90
V  90.8% (227/250)  IGHV4-31*01  49   .......................C..............C.GC.....T....AC.AC.G...C...AT........A............C  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       P  G  W  I  G  F  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 
                    Query_7409   91   CCGGGGTGGATTGGGTTCATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACCTCT  180
V  90.8% (227/250)  IGHV4-31*01  139  .T..A...........A.....................................................................G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  R  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  N  Y  Y  Y  G  S 
                    Query_7409   181  AAGAACCGGTTCTCCCTGAAGTTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGAACTATTACTATGGTTCG  270
V  90.8% (227/250)  IGHV4-31*01  229  .......A.............C...GC...........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (18/18)   IGHD3-10*01  2    ---------------------------------------------------------------------------...............  16

                                      ----------------->                                  
                                       G  A  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7409   271  GGGGCCCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (18/18)   IGHD3-10*01  17   ...-------------------------------------------------  19
J  100.0% (45/45)   IGHJ4*02     4    -------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_74818

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           305     3e-85
IGHD3-22*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	AATTCC	GATGGTAGTGGCTAT	CCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAAATTCCGATGGTAGTGGCTATCCCCTTGACTAC	ARNSDGSGYPLDY	230	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	105	9	0	92.1
CDR3-IMGT (germline)	230	235	6	5	1	0	83.3
Total	N/A	N/A	223	209	14	0	93.7


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  A  W  V  A  V  I  W  N  D
                    Query_7410   13   GTCTGGATTTACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGCGTGGGTGGCAGTTATATGGAATGA  102
V  93.7% (209/223)  IGHV3-33*01  72   .........C..........G............................................A...................T....  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  I  L  Y  L  Q  M  N
                    Query_7410   103  TGGAAGTAATAAATACTATGCAGAGTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACATTCTGTATCTGCAAATGAA  192
V  93.7% (209/223)  IGHV3-33*01  162  ........................C..............................................CG.................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------CDR3-IMGT-------------->              
                                        R  L  G  A  E  D  T  A  I  Y  Y  C  A  R  N  S  D  G  S  G  Y  P  L  D  Y  W  G  Q  G  I
                    Query_7410   193  TCGACTGGGAGCCGAGGACACGGCTATTTATTACTGTGCGCGAAATTCCGATGGTAGTGGCTATCCCCTTGACTACTGGGGCCAGGGAAT  282
V  93.7% (209/223)  IGHV3-33*01  252  CA.C...A.................G.G............A..-----------------------------------------------  294
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  86.7% (13/15)    IGHD3-22*01  11   -------------------------------------------------...A.......T...--------------------------  25
J  97.6% (41/42)    IGHJ4*02     7    --------------------------------------------------------------------.....................C  28

                                                          
                                        L  V  T  V  S  S  
                    Query_7410   283  CCTGGTCACCGTCTCCTCAG  302
J  97.6% (41/42)    IGHJ4*02     29   ....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_110158

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD3-10*01                                                                                           12.2    32   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_7411   1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  87.0% (214/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_7411   91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCACCATCTCAGTAGACAAGTCCAAG  180
V  87.0% (214/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A................A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_7411   181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  87.0% (214/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_7411   271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_189942

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           291     5e-81
IGHD3-3*01                                                                                            12.2    31   
IGHJ3*01                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCT	TTACGA	GGGGCTAACTTTTCCTT	TCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCTTTACGAGGGGCTAACTTTTCCTTTC	ARDLYEGLTFPF	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	215	29	0	88.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  P  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_7412   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTCCTTACTTCTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAGC  93
V  88.1% (215/244)  IGHV4-59*01  50   .....TCC...A....C........................AG.....A........................A...............T  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      R  L  G  Y  I  N  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  P  T  I  S  V  D  T  S  N  S  
                    Query_7412   94   GGCTAGGATATATCAATTACACTGGGAGTACCAACTACAATCCCTCCCTCAAGAGTCGACCCACCATATCAGTAGACACGTCCAACAGCC  183
V  88.1% (215/244)  IGHV4-59*01  140  ..A.T..G......T......G......C...........C..................GT........................G.A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  E  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  Y  E  G  L  T  F  P  
                    Query_7412   184  AATTCTCCCTGGAGTTGTCTTCTGTGACCGCTGCGGACACGGCCGTGTACTATTGTGCGAGAGACCTTTACGAGGGGCTAACTTTTCCTT  273
V  88.1% (215/244)  IGHV4-59*01  230  .G.........A..C..AGC.............................T..C...........--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD3-3*01   4    -------------------------------------------------------------------......-----------------  9

                                      ->                                  
                                      F  W  G  P  G  T  M  V  T  V  S  S  
                    Query_7412   274  TCTGGGGCCCAGGGACAATGGTCACCGTCTCCTCAG  309
J  94.4% (34/36)    IGHJ3*01     15   .........A.....................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_189943

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           377     8e-107
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTTC	ARRGYSYGYYYFDF	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	242	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7413   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.6% (242/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7413   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  99.6% (242/243)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_7413   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  99.6% (242/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7413   271  TTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    .......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_189941

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           349     2e-98
IGHD3-16*01                                                                                           12.2    30   
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTTTCC	TGGGGG	N/A	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTCCTGGGGGTGCTTATGATATC	ARHFPGGAYDI	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  F  C  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7414   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTTCTGCAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*08  49   ...............................G.................A...G....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  T  N  Y  T  P  S  L  K  R  R  V  T  I  S  V  D  T  P  K  N 
                    Query_7414   91   TGGATTGGGTATATCTCTTACAGTGGGAGCACCAACTACACCCCCTCCCTCAAGCGTCGAGTCACCATATCAGTTGACACGCCAAAGAAC  180
V  95.5% (234/245)  IGHV4-59*08  139  ................A.......................A.............A...................A......T.C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  H  F  P  G  G  A  Y  D  I 
                    Query_7414   181  CAGTTCTCCCTGAAGCTGACCTCTGTGTCCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATTTTCCTGGGGGTGCTTATGATATC  270
V  95.5% (234/245)  IGHV4-59*08  229  ...................G.......A.....................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*01  17   -----------------------------------------------------------------------......-------------  22
J  97.8% (45/46)    IGHJ3*02     4    -----------------------------------------------------------------------------.....T.......  16

                                                                       
                                       W  G  Q  G  T  M  V  T  V  S  S 
                    Query_7414   271  TGGGGCCAAGGGACAATGGTCACCGTCTCTTCA  303
J  97.8% (45/46)    IGHJ3*02     17   .................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_189944

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           366     2e-103
IGHD2-2*01                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCT	TTGTACTAGTACCAGTTGCTA	CTCCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCTTTGTACTAGTACCAGTTGCTACTCCTTCTACTCGTACGGTCTGGACGTC	ARELCTSTSCYSFYSYGLDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  I  Y  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_7415   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTATATATAGTATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-21*01  47   .............................................GC.....C....A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  T  Y  T  Y  Y  A  D  S  M  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7415   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTACTTATACATACTACGCAGACTCAATGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (242/250)  IGHV3-21*01  137  ..............................G...C.T................G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  L  C  T  S  T  S  
                    Query_7415   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGCTTTGTACTAGTACCAGTT  270
V  96.8% (242/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD2-2*01   7    -------------------------------------------------------------------------.....G.........C.  23

                                      R3-IMGT------------------------>                                 
                                      C  Y  S  F  Y  S  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7415   271  GCTACTCCTTCTACTCGTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  90.5% (19/21)    IGHD2-2*01   24   ....-------------------------------------------------------------  27
J  94.5% (52/55)    IGHJ6*02     8    ----------.....AC......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_35336

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD5-18*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATAGTC	ATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATAGTCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	240	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7416   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.8% (240/243)  IGHV4-59*01  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  N  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7416   91   TGGATTGGGTATATCTACAACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (240/243)  IGHV4-59*01  139  .................TT.......................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D 
                    Query_7416   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATATAGTCATGGTTACGGAGGAGTTGAC  270
V  98.8% (240/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD5-18*01  13   ----------------------------------------------------------------------........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7416   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_162956

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           315     5e-88
IGHD6-19*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCAAC	GGGTATAGAAGTGGC	AGATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAACGGGTATAGAAGTGGCAGATAACTACTACTATGGTTTGGACGTC	AATGIEVADNYYYGLDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  H  G  M  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_7417   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAGTCATGGCATGCAGTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.0% (223/245)  IGHV3-30*03  47   ...........................................T..CT..........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  F  N  G  S  H  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_7417   91   AATGGTTGGCAGTTATCTCATTTAATGGAAGTCATACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  91.0% (223/245)  IGHV3-30*03  137  .G...G..........A....A.G........A...A...........................A......A..................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  A  L  Y  L  Q  M  A  S  L  R  S  A  D  T  A  V  Y  F  C  A  A  T  G  I  E  V  A  D  
                    Query_7417   181  AGAACGCACTGTATCTGCAAATGGCCAGCCTGAGATCTGCGGACACGGCTGTTTACTTCTGTGCGGCAACGGGTATAGAAGTGGCAGATA  270
V  91.0% (223/245)  IGHV3-30*03  227  .....A.G...............AA..........G...A............G..T.A.......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.3% (14/15)    IGHD6-19*01  1    ----------------------------------------------------------------------........C......-----  15

                                      GT-------------------->                                 
                                      N  Y  Y  Y  G  L  D  V  W  G  H  G  T  T  V  T  V  S  S 
                    Query_7417   271  ACTACTACTATGGTTTGGACGTCTGGGGCCACGGGACCACGGTCACCGTCTCCTCA  326
J  94.6% (53/56)    IGHJ6*02     7    ..........C...A................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_56536

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD2-21*02                                                                                           16.1    2.5   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TTTG	GGTGATGACTG	GGATCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTTTGGGTGATGACTGGGATCAATACTACTTTGACTAC	ASLGDDWDQYYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	270	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  T  G  E  S  L  K  I  S  C  R  C  S  G  Y  R  F  T  N  Y
                    Query_7418   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGACCGGGGAGTCTCTGAAGATCTCCTGTAGGTGTTCTGGATACAGGTTTACCAATTA  90
V  93.8% (270/288)  IGHV5-51*01  6    ..................................C...........................A.G.............C.......GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  M  G  M  M  N  P  G  D  S  D  T  R  Y  S  P
                    Query_7418   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACATGGGAATGATGAATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  93.8% (270/288)  IGHV5-51*01  96   ........G...................................GG.....G..C..CT...............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  G  Q  V  T  I  S  V  D  E  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_7418   181  GCCCTTCCAAGGCCAGGTCACCATCTCAGTCGACGAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  93.8% (270/288)  IGHV5-51*01  186  .T...........................C....A..........C...........................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  S  L  G  D  D  W  D  Q  Y  Y  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_7418   271  CATGTATTACTGTGCGAGTTTGGGTGATGACTGGGATCAATACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  359
V  93.8% (270/288)  IGHV5-51*01  276  ..................-----------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                          
D  90.9% (10/11)    IGHD2-21*02  11   ----------------------....G......--------------------------------------------------------  21
J  97.9% (47/48)    IGHJ4*02     1    -----------------------------------------...................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_56531

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           363     1e-102
IGHD6-19*01                                                                                           21.8    0.040 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCAGG	GCAGTGGCTGG	CACG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTC	ARVPGQWLARGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7419   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (239/246)  IGHV3-53*01  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  M  Y  S  G  G  T  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_7419   91   AGTGGGTCTCAGTTATGTATAGCGGTGGGACCACATACTACGCAGAGTCCGTGAAGGGCCGATTCACCATCTCAAGAGACAATTCCAAGA  180
V  97.2% (239/246)  IGHV3-53*01  137  ................T...........T.G...............C..........................C................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  G  Q  W  L  A  R  
                    Query_7419   181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGTCCCAGGGCAGTGGCTGGCACGCG  270
V  97.2% (239/246)  IGHV3-53*01  227  ..................................................................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD6-19*01  8    -------------------------------------------------------------------------...........------  18
J  100.0% (46/46)   IGHJ6*02     17   ----------------------------------------------------------------------------------------..  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7419   271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (46/46)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_334673

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           285     4e-79
IGHD2-8*02                                                                                            19.9    0.16 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGATGCGGCGGAGCGAAATCA	GTACTGGTGG	GG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATGCGGCGGAGCGAAATCAGTACTGGTGGGGACTACTTTGACCGC	ARMRRSEISTGGDYFDR	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  A  S  G  G  S  I  R  S  D  P  Y  L  W  S  W  V  R  Q  H  P  V  K  G 
                    Query_7420   1    ACCCTGTCCCTCACCTGCACTGCCTCTGGTGGCTCCATAAGAAGTGATCCTTACCTCTGGAGCTGGGTCCGCCAGCACCCAGTGAAGGGC  90
V  87.0% (214/246)  IGHV4-31*03  49   ......................T...............C..C....G.GG....TA..........A...............G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  Y  M  Y  Y  S  G  S  N  R  Y  N  P  S  L  K  S  R  V  S  M  S  L  D  T  S 
                    Query_7420   91   CTGGAGTGGATTGCATACATGTACTACAGTGGGAGTAATCGCTACAACCCGTCCCTCAAGAGTCGAGTTTCCATGTCGCTAGACACGTCT  180
V  87.0% (214/246)  IGHV4-31*03  139  .............GG.....C..T...........C.CCTA............................A....A..AG...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       R  N  Q  F  S  L  R  L  T  S  M  T  A  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  I  S 
                    Query_7420   181  AGGAACCAGTTCTCCCTAAGGCTGACCTCTATGACGGCCGCGGACACGGCCATCTACTACTGTGCGCGGATGCGGCGGAGCGAAATCAGT  270
V  87.0% (214/246)  IGHV4-31*03  229  .A...............G.A.....G....G....T...............G.G..T.........------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (10/10)   IGHD2-8*02   9    ----------------------------------------------------------------------------------------..  10

                                      MGT-------------------->                                  
                                       T  G  G  D  Y  F  D  R  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_7420   271  ACTGGTGGGGACTACTTTGACCGCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  328
D  100.0% (10/10)   IGHD2-8*02   11   ........--------------------------------------------------  18
J  91.7% (44/48)    IGHJ4*02     1    ----------...........TA.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_115680

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           343     2e-96
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTTTGT	TAGTAATGGCTTTTACTAC	G	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTTTGTTAGTAATGGCTTTTACTACGACTGGTACTTCGATCTC	ARGFVSNGFYYDWYFDL	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  N  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7421   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAACTATAACATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-21*01  47   .............................................G.....G....A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  D  Y  I  Y  Y  L  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7421   91   AATGGGTCTCATCGATTAGTAGTACTAGTGATTACATATACTACTTGGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCC  180
V  94.0% (234/249)  IGHV3-21*01  137  .G...........C..........G....AG.............GCA..........................................A  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      Q  N  S  L  H  L  Q  M  T  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  F  V  S  N  G  F  
                    Query_7421   181  AGAACTCACTGCATCTGCAAATGACCAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGGGTTTGTTAGTAATGGCTTTT  270
V  94.0% (234/249)  IGHV3-21*01  227  ...........T............A...........................G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.2% (16/19)    IGHD3-22*01  13   ----------------------------------------------------------------------------.....G...T.A..  26

                                      GT-------------------->                                
                                      Y  Y  D  W  Y  F  D  L  W  G  R  G  T  L  L  T  V  S  S
                    Query_7421   271  ACTACGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGCTAACTGTCTCCTC  325
D  84.2% (16/19)    IGHD3-22*01  27   .....--------------------------------------------------  31
J  95.9% (47/49)    IGHJ2*01     3    ------...................................G.C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_115681

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           327     9e-92
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAAG	AGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQEWLPGDWYFDL	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  R  N  Y  W  S  W  I  R  Q  P  P  G  E  R  L  E 
                    Query_7422   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCACTAGAAACTACTGGAGCTGGATTCGGCAGCCCCCAGGGGAGAGACTGGAG  90
V  93.0% (226/243)  IGHV4-59*08  49   ...................C...........G........G...TT................C...............A..G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_7422   91   TGGATAGCGTATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  93.0% (226/243)  IGHV4-59*08  139  .....T.G.......T...........AG...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  F  L  P  A  V  Q  E  W  L 
                    Query_7422   181  CAGTTCTCCCTGAAGATGACCTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTG  270
V  93.0% (226/243)  IGHV4-59*08  229  ...............C...G.........................G.................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  10   ----------------------------------------------------------------------------------........  17

                                      ----------------------->                                  
                                       P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_7422   271  CCAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCGTCAG  328
J  96.1% (49/51)    IGHJ2*01     3    -------......................................A.......C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_79798

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           439     2e-125
IGHD3-16*01                                                                                           12.2    35    
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTTGAGG	GATTAC	CAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTAC	ARSLRDYQPFYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	285	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_7423   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  98.6% (285/289)  IGHV5-51*03  6    .............................................................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_7423   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.6% (285/289)  IGHV5-51*03  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7423   181  GTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACTGC  270
V  98.6% (285/289)  IGHV5-51*03  186  ......................A................................................................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  S  L  R  D  Y  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_7423   271  CATGTATTACTGTGCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  359
V  98.6% (285/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  8    ----------------------------......-------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ------------------------------------------....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_115683

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           316     2e-88
IGHD6-6*01                                                                                            14.1    8.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	ATTTCTTAGGG	GCTCGTC	AGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACATTTCTTAGGGGCTCGTCAGGCTTTCACTAC	TFLRGSSGFHY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	101	13	0	88.6
CDR3-IMGT (germline)	249	250	2	2	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  G  S  D  L  D  W  V  R  Q  A  S  G  K  G  L  
                    Query_7424   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCGCCTTCAGTGGCTCTGATTTGGACTGGGTCCGCCAGGCTTCCGGGAAAGGCCTGG  90
V  90.4% (226/250)  IGHV3-73*01  47   .........A.........................A...............C.A..C............................G....  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  M  R  T  K  D  D  N  Y  A  T  L  Y  A  A  S  V  R  G  R  F  T  I  S  R  D  
                    Query_7424   91   AGTGGGTTGGCCGTATGAGAACCAAAGATGACAATTACGCGACACTATATGCTGCGTCGGTGAGAGGCAGGTTCACCATCTCCAGAGATG  180
V  90.4% (226/250)  IGHV3-73*01  137  ................T....G.....C.A...G..........GC.................A..........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  N  M  A  Y  L  Q  M  S  G  L  D  T  E  D  T  A  L  Y  F  C  T  F  L  R  G  S  S  
                    Query_7424   181  ATTCAAAGAACATGGCTTATCTGCAAATGAGCGGCCTGGACACCGAGGACACGGCCCTTTACTTCTGTACATTTCTTAGGGGCTCGTCAG  270
V  90.4% (226/250)  IGHV3-73*01  227  ............C...G.............A.A.....A.A...............G.G..T.A......--------------------  296
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------.......--  17

                                      ---------->                                  
                                      G  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7424   271  GCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (43/44)    IGHJ4*02     5    -....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_115686

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           322     2e-90
IGHD5-12*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	T	TGGTTACGAT	CGATTCCC	TGACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTTGGTTACGATCGATTCCCTGACAAC	ARVGYDRFPDN	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  N  D  G  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  R 
                    Query_7425   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAACGATGGTAATTATTACTGGAGCTGGATCCGACAGCCCCCAGGGAAGAGA  90
V  91.2% (228/250)  IGHV4-61*01  49   ........................................G.AG.....G...C.................G...............G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  F  I  Y  Y  T  G  S  T  T  D  N  P  S  L  K  S  R  V  T  M  S  V  D  T  P 
                    Query_7425   91   CTGGAGTGGATGGGGTTTATCTATTACACTGGGAGCACCACCGACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGCCC  180
V  91.2% (228/250)  IGHV4-61*01  139  ...........T....A...........G...........A.T...............................A.....A......T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  R  L  W  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  V  G  Y  D  R  F  P 
                    Query_7425   181  AAGAACCAGTTCTCCCTGCGGCTATGGTCTGTGACCTCTGCGGACACGGCCGTGTATTACTGTGCCAGAGTTGGTTACGATCGATTCCCT  270
V  91.2% (228/250)  IGHV4-61*01  229  ..................AA...GA.C.........G............................G....--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD5-12*01  11   -----------------------------------------------------------------------...C......---------  20
J  97.6% (40/41)    IGHJ4*02     8    -----------------------------------------------------------------------------------------.  8

                                      ----->                                  
                                       D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7425   271  GACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  97.6% (40/41)    IGHJ4*02     9    ...T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_115687

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           291     6e-81
IGHD3-10*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGCTGGAGGGGGC	TTCGGGACGTTACTATAA	TGGACGGCGGGGGATTCC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGCTGGAGGGGGCTTCGGGACGTTACTATAATGGACGGCGGGGGATTCCGGACGTC	ARLEGASGRYYNGRRGIPDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	216	30	0	87.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  N  S  H  Y  W  V  W  I  R  Q  S  P  V  K  G 
                    Query_7426   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCACCAATAGTCACTACTGGGTCTGGATCCGCCAGTCCCCAGTGAAGGGG  90
V  87.8% (216/246)  IGHV4-39*01  49   ...........................................GT.G....T.........G.............C......G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  V  F  Y  S  G  T  T  S  Y  N  P  S  L  R  G  R  V  T  I  S  V  G  P  S 
                    Query_7426   91   CTGGAGTGGATTGGGACCGTCTTTTATAGCGGGACCACCTCCTACAACCCGTCCCTCAGGGGTCGAGTCACCATCTCCGTTGGCCCGTCC  180
V  87.8% (216/246)  IGHV4-39*01  139  ................GTA...A......T....G.....A.................A.A.............A.....A.A.A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       N  N  Q  F  S  L  E  V  R  S  V  T  A  A  D  T  S  I  Y  Y  C  A  R  L  E  G  A  S  G  R 
                    Query_7426   181  AACAACCAATTCTCCCTGGAGGTGAGGTCTGTGACCGCCGCGGACACCTCTATTTATTACTGTGCGCGGCTGGAGGGGGCTTCGGGACGT  270
V  87.8% (216/246)  IGHV4-39*01  229  ..G.....G.........A..C....C..............A.....GG..G.G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  83.3% (15/18)    IGHD3-10*01  13   --------------------------------------------------------------------------------......GA..  22

                                      DR3-IMGT------------------------>                                 
                                       Y  Y  N  G  R  R  G  I  P  D  V  W  G  Q  G  T  T  V  T  V  A  S 
                    Query_7426   271  TACTATAATGGACGGCGGGGGATTCCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCGCCTCA  336
D  83.3% (15/18)    IGHD3-10*01  23   ..T.....----------------------------------------------------------  30
J  97.5% (39/40)    IGHJ6*02     23   --------------------------..................................T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_115688

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACCACTTCCACGGTATGGACGTC	ARHGDDSGSYLYHFHGMDV	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	71	3	0	95.9
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	295	280	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  
                    Query_7427   5    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCA  94
V  94.9% (280/295)  IGHV5-51*01  2    ..G..............................A...................................G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  C  
                    Query_7427   95   ACTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATGCA  184
V  94.9% (280/295)  IGHV5-51*01  92   G...........G...........................C....................C...................C.....A..  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  T  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  
                    Query_7427   185  GCCCGTCCTTCGAAGGCCAGGTCACCATCACAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACA  274
V  94.9% (280/295)  IGHV5-51*01  182  ...........C.................T...................C...........G......A.....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  H  F  H  G  M  D  V  W  G  Q  G  T  
                    Query_7427   275  CCGCCATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACCACTTCCACGGTATGGACGTCTGGGGCCAAGGGACCA  364
V  94.9% (280/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  92.9% (13/14)    IGHD1-26*01  4    ---------------------------------..........C...-------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------------...T...A.T..............................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_7427   365  CGGTCACCGTCTCCTCA  381
J  94.7% (54/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_79793

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            311     4e-87
IGHD2-21*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCGACCGAGGA	ACTGCTA	ACCTCTTCGAGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACCGAGGAACTGCTAACCTCTTCGAGAATGCTCTTAGTATC	AADRGTANLFENALSI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  R  G  H  I  T  S  S  H  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_7428   1    ACCCTGTCCCTCACCTGCGCTGTCTCTCGTGGCCACATCACCAGTAGTCACTGGTGGAACTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.9% (221/243)  IGHV4-4*02   49   ...........................G.....TC.....G.......A.........GT..............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  Q  I  Y  Q  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  K  S  R 
                    Query_7428   91   GAGTGGATTGGACAAATTTATCAGAGTGGGAGCACCAATTATAACCCGTCCCTCAGGAGTCGAGTCACCATTTCAGTGGACAAGTCCAGG  180
V  90.9% (221/243)  IGHV4-4*02   139  ...........GG....C.....T..............C..C.............A...............A.....A..........A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  L  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  A  D  R  G  T  A  N  L  F 
                    Query_7428   181  AACCTCTTCTCCCTGACGCTGACCTCTGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGGCCGACCGAGGAACTGCTAACCTCTTC  270
V  90.9% (221/243)  IGHV4-4*02   229  ....AG..........A.....G...........................G............---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD2-21*02  18   ---------------------------------------------------------------------------.......--------  24

                                      ----------------->                                  
                                       E  N  A  L  S  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7428   271  GAGAATGCTCTTAGTATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  93.8% (45/48)    IGHJ3*02     3    ----.....T..GA......................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_79790

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           318     5e-89
IGHD3-16*01                                                                                           12.2    30   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	TTTGGG	TTTGCTTGGGACTAAATTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTTTGGGTTTGCTTGGGACTAAATTCGAC	ASLGLLGTKFD	232	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	10	1	0	90.9
CDR1-IMGT	19	42	24	20	4	0	83.3
FR2-IMGT	43	93	51	49	2	0	96.1
CDR2-IMGT	94	117	24	22	2	0	91.7
FR3-IMGT	118	231	114	110	4	0	96.5
CDR3-IMGT (germline)	232	236	5	5	0	0	100
Total	N/A	N/A	229	216	13	0	94.3


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  L  S  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  
                    Query_7429   8    GTGCAGTCTCTGGGTTCACCCTCAGTAATTATGAGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATATATTA  97
V  94.3% (216/229)  IGHV3-48*03  65   ......C......A......T......G......A............................................T.....C....  154
                                         A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  S  G  G  T  I  Y  Y  A  H  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_7429   98   GTAGTAGTGGTGGTACCATTTATTACGCACACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGC  187
V  94.3% (216/229)  IGHV3-48*03  155  ...........A.......A..C......G............................................................  244
                                      S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-----------CDR3-IMGT----------->             
                                      Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  L  G  L  L  G  T  K  F  D  W  G  Q  G  
                    Query_7429   188  AAATGAACAGCCTGAGAGTCGAAGACACGGCTGTTTATTACTGTGCGAGTTTGGGTTTGCTTGGGACTAAATTCGACTGGGGCCAGGGAA  277
V  94.3% (216/229)  IGHV3-48*03  245  ..................C...G..........................-----------------------------------------  293
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (6/6)     IGHD3-16*01  15   -------------------------------------------------......-----------------------------------  20
J  100.0% (36/36)   IGHJ4*02     13   ---------------------------------------------------------------------------...............  27

                                                           
                                      T  L  V  T  V  S  S  
                    Query_7429   278  CCCTGGTCACCGTCTCCTCAG  298
J  100.0% (36/36)   IGHJ4*02     28   .....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_79791

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           307     1e-85
IGHD3-10*01                                                                                           14.1    8.6  
IGHJ2*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TCTTCA	GGTTTGGAGAGTT	CCTACTCAGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGGATCTTCAGGTTTGGAGAGTTCCTACTCAGGACTGGTACTTCCATGTC	VKDLQVWRVPTQDWYFHV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  E  F  T  F  R  A  Y  G  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7430   1    GGTCCCTGAGACTCTCCTGTGCAACCTCAGAGTTCACCTTCCGCGCCTATGGCCTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  89.2% (223/250)  IGHV3-30*18  47   .......................G....T.GA.........A.TAG.......A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  S  H  D  G  T  N  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7430   91   AGTGGGTGGCAGCGATATCCCATGATGGAACTAATAAGAACTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  89.2% (223/250)  IGHV3-30*18  137  ............TT.....AT.........G......AT......C............................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  N  T  L  D  L  Q  M  N  S  L  R  P  D  D  T  A  T  Y  Y  C  V  K  D  L  Q  V  W  R  V  
                    Query_7430   181  GGAACACACTGGATCTGCAAATGAACAGCCTGAGACCTGACGACACGGCTACATATTACTGTGTGAAGGATCTTCAGGTTTGGAGAGTTC  270
V  89.2% (223/250)  IGHV3-30*18  227  A......G...T.......................G....G.........GTG..........C...A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  84.6% (11/13)    IGHD3-10*01  11   ----------------------------------------------------------------------------....C..G.....-  23

                                      IMGT--------------------->                                  
                                      P  T  Q  D  W  Y  F  H  V  W  G  R  D  T  L  V  S  V  S  S  
                    Query_7430   271  CTACTCAGGACTGGTACTTCCATGTCTGGGGCCGTGACACCCTGGTCAGTGTCTCCTCAG  330
J  92.2% (47/51)    IGHJ2*01     3    ---------...........G..C............G...........C...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_79796

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            332     3e-93
IGHD2-15*01                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	GTGGTA	CTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACGTGGTACTCGGGGTTTTGACTAC	ARHLGTRGTRGFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	22	2	3	81.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	246	231	12	3	93.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_7431   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  87
V  93.9% (231/246)  IGHV4-4*02   49   ...............................G.....T........GTA.......................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  T  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  I  I  S  L  D  T  S  K 
                    Query_7431   88   GAGTGGATTGGGGAAACCTATCACAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCACTAGACACGTCCAAG  177
V  93.9% (231/246)  IGHV4-4*02   139  ................T......T...........................................C.......G......A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  R  G  T  R 
                    Query_7431   178  AATCAGTTCTCCCTGAATCTCAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACGTGGTACTCGG  267
V  93.9% (231/246)  IGHV4-4*02   229  ..C..............G..G.G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-15*01  15   -------------------------------------------------------------------------------......-----  20

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_7431   268  GGTTTTGACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  313
J  97.7% (42/43)    IGHJ4*02     6    ---.........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_79797

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD6-25*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTC	ARQSSAGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	16	8	0	66.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	268	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  R  S  S  G  H  D  F  L  D  Y
                    Query_7432   1    GCAGCTGGTGCAGTCTGGAGCAGAGCTAAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGAGTTCTGGGCACGACTTTCTCGACTA  90
V  92.1% (268/291)  IGHV5-51*01  6    .........................G.G..A.....C.........................A.G.......AT..AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_7432   91   CTGGATCGTCTGGGTGCGCCAAATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGTCC  180
V  92.1% (268/291)  IGHV5-51*01  96   ........G............G..........................................................G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  A
                    Query_7432   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGCGCAGTCTGAAGGCCTCGGACACCGC  270
V  92.1% (268/291)  IGHV5-51*01  186  .............................C...............C..................A....C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_7432   271  CAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  360
V  92.1% (268/291)  IGHV5-51*01  276  ..T..................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  100.0% (48/48)   IGHJ6*02     15   -------------------------------------------...............................................  61

                                       
                                       
                    Query_7432   361  A  361
J  100.0% (48/48)   IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_79795

Length=407
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           422     3e-120
IGHD7-27*01                                                                                           14.1    10.0  
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTCTCTACAGAACCGTCCTATGGGACA	CTAACTG	TGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCC	ARDPFSTEPSYGTLTVRFDP	292	351	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	108	6	0	94.7
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	283	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_7433   4    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  93
V  95.6% (283/296)  IGHV1-18*01  1    .....T.....G..............................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  P  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  D  T  N  Y 
                    Query_7433   94   AACTATCCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTGACACAAATTAT  183
V  95.6% (283/296)  IGHV1-18*01  91   .G....GG..........................................................G...........A.......C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  D  L  R  S  L  T  S  D  D 
                    Query_7433   184  GCACAGAAGTTCCAGGGCAGAGTCACCTTGACCACAGACACGTCCACGAGCACAGCCTACATGGACCTGAGGAGCCTGACATCTGACGAC  273
V  95.6% (283/296)  IGHV1-18*01  181  .........C.................A.............A.......................G.............G..........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  V  Y  Y  C  A  R  D  P  F  S  T  E  P  S  Y  G  T  L  T  V  R  F  D  P  W  G  Q  G 
                    Query_7433   274  ACGGCCGTGTATTACTGTGCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCCTGGGGCCAGGGA  363
V  95.6% (283/296)  IGHV1-18*01  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD7-27*01  1    ---------------------------------------------------------.......--------------------------  7
J  97.8% (44/45)    IGHJ5*02     7    -------------------------------------------------------------------.......................  29

                                                            
                                       T  L  V  T  V  S  T  
                    Query_7433   364  ACCCTGGTCACCGTCTCCACAG  385
J  97.8% (44/45)    IGHJ5*02     30   ..................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39867768


Query= Query_59181

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           310     1e-86
IGHD3-3*01                                                                                            10.3    119  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGACACAG	TTTTT	AGTTTCCAC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACACAGTTTTTAGTTTCCACTTCGACCCC	ARVDTVFSFHFDP	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  F  F  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_7434   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGCGGTAGTTTCTTTTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  89.6% (224/250)  IGHV4-61*01  49   .........................................C..T.......A..AC....G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  A  Y  I  S  Y  S  G  R  T  K  S  N  P  S  L  K  S  R  V  T  M  S  I  D  T  S 
                    Query_7434   91   CTGGAATGGCTTGCCTATATCTCTTACAGTGGGAGAACCAAGTCTAATCCCTCTCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCC  180
V  89.6% (224/250)  IGHV4-61*01  139  .....G...A...GG.......A............C.....C.AC..C.....C....................A...G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  V  D  T  V  F  S  F 
                    Query_7434   181  AAGAACCAATTCTCCCTGAGGCTGACTTCCGTGACCGCTGCGGACACGGCCGTTTATTTCTGTGCGAGAGTGGACACAGTTTTTAGTTTC  270
V  89.6% (224/250)  IGHV4-61*01  229  ........G..........A.....GC..T.......................G....A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-3*01   10   -------------------------------------------------------------------------------.....------  14

                                      ----------->                                  
                                       H  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7434   271  CACTTCGACCCCTGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ5*02     9    ---.......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_138864

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           346     2e-97
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AC	ATTACGATTTTTCGAGTGGT	CTCATTATCGGAAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACATTACGATTTTTCGAGTGGTCTCATTATCGGAACTGACTAC	AREHYDFSSGLIIGTDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  R  G  S  Y  Y  W  S  W  N  R  Q  S  P  G  K  G 
                    Query_7435   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGAGGTTCTTACTACTGGAGTTGGAACCGGCAGTCCCCAGGGAAGGGA  90
V  94.0% (236/251)  IGHV4-61*01  49   .........................................C..T...AG............C....T.......C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  H  S  G  S  T  N  Y  H  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_7435   91   CTGGAGTGGATTGGGTATATTTATCACAGTGGGAGCACCAACTATCACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCC  180
V  94.0% (236/251)  IGHV4-61*01  139  ....................C...T...................CA................................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  H  Y  D  F  S  S 
                    Query_7435   181  AAGAACCAGTTCTCCCTGAAGCTGAATTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGAACATTACGATTTTTCGAGT  270
V  94.0% (236/251)  IGHV4-61*01  229  .........................GC..........................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-3*01   3    -------------------------------------------------------------------------............G....  19

                                      MGT-------------------->                                  
                                       G  L  I  I  G  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7435   271  GGTCTCATTATCGGAACTGACTACTGGGGCCAGGGTACCCTGGTCACCGTCTCCTCAG  328
D  95.0% (19/20)    IGHD3-3*01   20   ...-------------------------------------------------------  22
J  97.6% (40/41)    IGHJ4*02     8    -----------------..................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_9343

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           344     6e-97
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	C	TATAGCAGTGGCTGG	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGACTATAGCAGTGGCTGGTACTTTGACTAC	ARDYSSGWYFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7436   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTACTTTCAGTAGCTACTGGATACACTGGGTCCGCCAAGCTCCAGGAAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-74*01  47   ..................................C..C.................G.......................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  I  T  R  D  E  I  G  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7436   91   AGTGGGTCTCACGTATTACTAGAGATGAGATTGGCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-74*01  137  T.................A...T....G..G.A......G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  S  S  G  W  Y  
                    Query_7436   181  AGAATACGGTGTATCTGCAAATGAACAGTCTCAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGGGACTATAGCAGTGGCTGGTACT  270
V  94.0% (235/250)  IGHV3-74*01  227  ....C...C......................G...................................A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD6-19*01  4    -----------------------------------------------------------------------...............----  18
J  97.8% (45/46)    IGHJ4*02     3    --------------------------------------------------------------------------------------....  6

                                      ------->                                  
                                      F  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_7436   271  TTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.8% (45/46)    IGHJ4*02     7    ...............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_8117

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           372     2e-105
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATC	TGTAGTAGTACCA	ACTTA	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATCTGTAGTAGTACCAACTTATATGGACGTC	ARESVVVPTYMDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7437   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.6% (244/250)  IGHV3-33*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7437   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATATTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  97.6% (244/250)  IGHV3-33*01  137  ........................................C...........C.....................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  M  Q  M  N  S  L  R  V  E  A  T  A  V  Y  Y  C  A  R  E  S  V  V  V  P  T  
                    Query_7437   181  AGAACACGCTGTATATGCAAATGAACAGCCTGAGAGTCGAGGCCACGGCTGTGTATTACTGTGCGAGAGAATCTGTAGTAGTACCAACTT  270
V  97.6% (244/250)  IGHV3-33*01  227  ..............C.....................C.....A...........................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD2-2*01   8    -------------------------------------------------------------------------.............----  20

                                      ---------->                                 
                                      Y  M  D  V  W  G  Q  G  P  T  V  T  V  S  S 
                    Query_7437   271  ATATGGACGTCTGGGGCCAAGGGCCCACGGTCACCGTCTCCTCA  314
J  97.7% (42/43)    IGHJ6*02     20   -......................A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_118108

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           367     6e-104
IGHD3-10*01                                                                                           14.1    9.3   
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGCC	ACTATGG	GGATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATC	ARSHYGDAYWYLDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	261	26	0	90.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T  S  Y 
                    Query_7438   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATCTTCACCAGTTAT  91
V  90.9% (261/287)  IGHV1-18*01  7    .................................................................T..........C...T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  F  E  W  M  G  W  I  S  P  Y  N  G  N  T  A  Y  A  E 
                    Query_7438   92   GGAATCACTTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAGCCTACGCAGAG  181
V  90.9% (261/287)  IGHV1-18*01  97   ..T....GC...........................C.......................G.................AA...T...C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  F  T  V  A  T  E  T  S  T  N  T  A  F  M  E  L  R  S  L  K  A  D  D  T  A 
                    Query_7438   182  AAGTTCCAGGGCAGATTCACCGTGGCCACAGAGACTTCCACGAACACAGCCTTCATGGAGCTGCGGAGTCTGAAAGCTGACGACACGGCC  271
V  90.9% (261/287)  IGHV1-18*01  187  ...C...........G.....A..A.......C..A.......G........A..........A....C....G.T..............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  S  H  Y  G  D  A  Y  W  Y  L  D  I  W  G  R  G  T  L  V  T  V  S  S  
                    Query_7438   272  GTCTATTACTGTGCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  359
V  90.9% (261/287)  IGHV1-18*01  277  ..G..............-----------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                          
D  100.0% (7/7)     IGHD3-10*01  6    ----------------------.......-----------------------------------------------------------  12
J  96.2% (51/53)    IGHJ2*01     1    -----------------------------------..........T.....C....................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_118109

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGACAG	ATTGTCGTAGTCCCCGGTGCTA	C	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGACAGATTGTCGTAGTCCCCGGTGCTACCTACGGTATGGACGTC	ARDRQIVVVPGATYGMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  S  S  S  Y  F  W  T  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_7439   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCAGCAGTAGTTACTTCTGGACTTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  90.6% (222/245)  IGHV4-59*01  49   .....................................T...........A.....GC.................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  D  G  S  G  S  P  R  Y  N  P  S  L  K  S  R  V  T  M  S  L  D  T  S  K  N 
                    Query_7439   91   TGGATTGGCTATGTCGATGGCAGTGGGAGTCCCAGGTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCGCTAGACACGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  ........G...A..T..TA.........CA...AC................................A..AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       R  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  Q  I  V  V  V  P  G 
                    Query_7439   181  CGATTCTCCCTGAGGCTGAATTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGACAGATTGTCGTAGTCCCCGGT  270
V  90.6% (222/245)  IGHV4-59*01  229  .AG..........A.....GC............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  81.8% (18/22)    IGHD2-2*01   6    ------------------------------------------------------------------------.....A.....A..A.C.  23

                                      -------------------->                                 
                                       A  T  Y  G  M  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_7439   271  GCTACCTACGGTATGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  324
D  81.8% (18/22)    IGHD2-2*01   24   ....--------------------------------------------------  27
J  98.0% (48/49)    IGHJ6*02     14   -----...............................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_33500

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           338     4e-95
IGHD6-19*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGCGA	TAGACT	CAGTGGCTGGT	CTGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGATAGACTCAGTGGCTGGTCTGCGTTTGACTCC	ASDRLSGWSAFDS	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	230	14	0	94.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  P  S  C  T  V  S  G  V  S  I  S  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  A  L  E  
                    Query_7440   4    CCCTGAGACCCTCCTGCACTGTCTCTGGTGTCTCCATCAGTAGTTACTACTGGGCCTGGATCCGACAGCCCCCAGGGAAGGCACTGGAGT  93
V  94.3% (230/244)  IGHV4-59*01  50   .....TCC.T.A..................G......................AG.........G................G........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  T  G  S  T  N  S  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_7440   94   GGATTGGGTATATCTATTACACTGGGAGCACCAACTCCAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  94.3% (230/244)  IGHV4-59*01  140  .....................G..............A.....................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  F  S  L  K  L  S  S  V  T  T  A  D  T  A  V  Y  Y  C  A  S  D  R  L  S  G  W  S  A  F  
                    Query_7440   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCACTGCGGACACGGCCGTGTATTACTGTGCGAGCGATAGACTCAGTGGCTGGTCTGCGTTTG  273
V  94.3% (230/244)  IGHV4-59*01  230  .............................G...............................A..--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (11/11)   IGHD6-19*01  9    ----------------------------------------------------------------------...........---------  19
J  97.7% (42/43)    IGHJ4*02     6    --------------------------------------------------------------------------------------....  9

                                      ---->                                  
                                      D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7440   274  ACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.7% (42/43)    IGHJ4*02     10   ...A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_118105

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACACA	TGTCACCAATA	ACTATGGTTCGGGGAG	GCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACATGTCACCAATAACTATGGTTCGGGGAGGCCCTTTGACGAC	ATHVTNNYGSGRPFDD	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	102	12	0	89.5
CDR3-IMGT (germline)	246	253	8	7	1	0	87.5
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  S  P  Y  Y  W  A  W  I  R  Q  P  P  G  K  G  
                    Query_7441   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTAGTCCTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  90.8% (227/250)  IGHV4-39*01  50   .....TCC...A....C..............................AG...........G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  Y  R  G  N  T  Q  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  
                    Query_7441   94   TGGAGTGGATTGGGAGTATCTATTATCGTGGGAACACCCAGTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCCG  183
V  90.8% (227/250)  IGHV4-39*01  140  ..........................A......G....T.C................................A...............A  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      G  N  Q  F  S  L  T  L  N  F  V  T  A  A  D  T  A  M  Y  Y  C  A  T  H  V  T  N  N  Y  G  
                    Query_7441   184  GGAATCAGTTCTCCCTGACACTGAATTTTGTGACCGCCGCAGACACGGCTATGTATTACTGTGCGACACATGTCACCAATAACTATGGTT  273
V  90.8% (227/250)  IGHV4-39*01  230  A...C.............AG....GC.C......................G...............G...--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (16/16)   IGHD3-10*01  6    ---------------------------------------------------------------------------------.........  14

                                      T------------------>                                  
                                      S  G  R  P  F  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7441   274  CGGGGAGGCCCTTTGACGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (16/16)   IGHD3-10*01  15   .......-----------------------------------------------  21
J  97.7% (43/44)    IGHJ4*02     5    ----------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_118106

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_7442   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG..G.T..................................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_7442   91   TGGATTGGATATATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  93.4% (228/244)  IGHV4-59*01  139  ........G...................G.....A............................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W 
                    Query_7442   181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------------------------------------------....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_7442   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (35/35)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_118107

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7443   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCGGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-21*01  47   .........................................A..AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_7443   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  92.8% (232/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_7443   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  92.8% (232/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7443   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_118100

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           327     9e-92
IGHD2-8*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGCGGGGGGTTTATCATGA	TAATGGTG	GCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGCGGGGGGTTTATCATGATAATGGTGGCCTTGACTTC	ARRRGVYHDNGGLDF	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  G  S  Y  Y  W  N  W  I  R  Q  T  P  G  K  G  P  E  
                    Query_7444   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTACTACTGGAACTGGATCCGACAGACCCCAGGGAAGGGACCTGAGT  93
V  93.0% (226/243)  IGHV4-59*08  50   .....TCC...A..........................A...............G.........G...C...............TG....  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  S  R  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_7444   94   GGATTGGGTATATCTATTCCAGGGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAACC  183
V  93.0% (226/243)  IGHV4-59*08  140  ..................A...T..................................................A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  N  L  L  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  R  G  V  Y  H  D  N  G  
                    Query_7444   184  AGTTCTCCCTGAACCTGCTCTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGAGACGGCGGGGGGTTTATCATGATAATGGTG  273
V  93.0% (226/243)  IGHV4-59*08  230  .............G...AG.................................C..........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD2-8*01   13   ----------------------------------------------------------------------------------........  20

                                      ---------->                                  
                                      G  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7444   274  GCCTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTTTCCTCAG  318
J  95.2% (40/42)    IGHJ4*02     7    ---......A...........................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_118101

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           318     6e-89
IGHD3-10*01                                                                                           10.3    132  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCTCTTTTCCACATGAATC	CGGGG	GTCCCCCCGACAGACGGCGATCTCGGACCCAATTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCTCTTTTCCACATGAATCCGGGGGTCCCCCCGACAGACGGCGATCTCGGACCCAATTTTTTGACTAT	AKVSFPHESGGPPDRRRSRTQFFDY	243	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  A  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_7445   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACGTTTAGCAGCTACGCCCTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGTTGG  90
V  90.8% (226/249)  IGHV3-23*01  47   .....................C...............C...........T...A...G............................C...  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  D  I  S  S  S  S  G  T  K  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7445   91   AATGGGTCTCAGATATTAGTAGTAGTAGTGGTACGAAACACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCTA  180
V  90.8% (226/249)  IGHV3-23*01  137  .G..........C.......G.....G......GC.C.T....C............................................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  V  Y  L  Q  M  E  S  L  R  G  E  D  T  A  V  Y  S  C  A  K  V  S  F  P  H  E  S  
                    Query_7445   181  AGAACACGGTGTATCTGCAAATGGAGAGCCTGAGAGGCGAGGACACAGCCGTATACTCCTGTGCGAAAGTCTCTTTTCCACATGAATCCG  270
V  90.8% (226/249)  IGHV3-23*01  227  ........C..............A.C..........C.........G........T.A...........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD3-10*01  15   ----------------------------------------------------------------------------------------..  16

                                      -----CDR3-IMGT-------------------------------->                                  
                                      G  G  P  P  D  R  R  R  S  R  T  Q  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7445   271  GGGGTCCCCCCGACAGACGGCGATCTCGGACCCAATTTTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  351
D  100.0% (5/5)     IGHD3-10*01  17   ...------------------------------------------------------------------------------  19
J  97.7% (42/43)    IGHJ4*02     6    --------------------------------------........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_118102

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           363     1e-102
IGHD3-3*01                                                                                            46.8    1e-09 
IGHJ5*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCCA	TATTACGATTTTTGGAGTGGTTAT	CCAGGCCTCA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGATCCATATTACGATTTTTGGAGTGGTTATCCAGGCCTCACC	TTDPYYDFWSGYPGLT	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	244	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7446   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAATGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.3% (244/256)  IGHV3-15*01  47   .......T......................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  N  K  T  D  G  G  T  A  A  Y  A  A  P  V  K  G  R  F  T  I  S  T  D  
                    Query_7446   91   AGTGGGTTGGCCGTATTAAAAATAAAACTGATGGTGGCACAGCAGCCTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAACAGATG  180
V  95.3% (244/256)  IGHV3-15*01  137  .....................GC..............G...A...A......................................G.....  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  K  N  T  V  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  D  P  Y  Y  D  
                    Query_7446   181  ATTCAAAAAACACGGTCTATTTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTATTGTACCACAGATCCATATTACGATT  270
V  95.3% (244/256)  IGHV3-15*01  227  ..............C.G...C...........................................C...........--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (24/24)   IGHD3-3*01   2    --------------------------------------------------------------------------------..........  11

                                      R3-IMGT------------------>                                  
                                      F  W  S  G  Y  P  G  L  T  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_7446   271  TTTGGAGTGGTTATCCAGGCCTCACCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  330
D  100.0% (24/24)   IGHD3-3*01   12   ..............----------------------------------------------  25
J  97.2% (35/36)    IGHJ5*02     16   ------------------------...............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_118103

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           352     3e-99
IGHD3-16*01                                                                                           43.0    2e-08
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCTAGTCTGGAA	TATGATTACGTTTGGGGGAGTT	CTCACCTCAC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCTAGTCTGGAATATGATTACGTTTGGGGGAGTTCTCACCTCACCTGGTTCGACCCC	AREASLEYDYVWGSSHLTWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	235	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  S  I  S  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7447   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCTCCATCAGTAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (235/245)  IGHV4-59*01  49   ...................C.........................T............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  T  G  S  T  K  Y  N  S  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7447   91   TGGATTGGGTATATGTATTACACTGGGAGCACCAAGTACAACTCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAT  180
V  95.9% (235/245)  IGHV4-59*01  139  ..............C.......G............C......C.........A....................................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  E  A  S  L  E  Y  D  Y  V 
                    Query_7447   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGAGCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAAGCTAGTCTGGAATATGATTACGTT  270
V  95.9% (235/245)  IGHV4-59*01  229  ...............C............C....................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (22/22)   IGHD3-16*01  5    ------------------------------------------------------------------------------............  16

                                      -IMGT--------------------------->                                  
                                       W  G  S  S  H  L  T  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7447   271  TGGGGGAGTTCTCACCTCACCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  337
D  100.0% (22/22)   IGHD3-16*01  17   ..........---------------------------------------------------------  26
J  100.0% (47/47)   IGHJ5*02     5    --------------------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_33502

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           291     5e-81
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CTA	TGGGAGCTACTA	TCGA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTATGGGAGCTACTATCGATACTTTGACAAC	ARDYGSYYRYFDN	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	44	7	0	86.3
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	102	12	0	89.5
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  F  G  G  S  I  S  S  G  G  Y  S  W  N  W  I  R  Q  R  P  G  E  G  
                    Query_7448   4    CCCTGAGACTCTCCTGTACTGTTTTTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAACTGGATCCGCCAGCGTCCAGGGGAGGGCC  93
V  87.2% (218/250)  IGHV4-31*02  50   .....TCC...A..........C.C.............................A.....G..............AC......A......  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  L  I  L  D  S  G  T  I  Y  Y  N  P  S  L  E  S  R  L  T  I  S  V  D  R  S  
                    Query_7448   94   TAGAGTGGATTGGGCTCATCCTTGACAGTGGGACCATTTACTACAACCCGTCCCTCGAGAGTCGACTTACCATTTCAGTAGACCGGTCTA  183
V  87.2% (218/250)  IGHV4-31*02  140  .G............TA....TA.T.........G..CC..................A........G.......A.........AC.....  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  R  V  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  D  Y  G  S  Y  Y  R  
                    Query_7448   184  AGAATCGGGTCTCCCTGAAGGTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTTCTGTGCGAGAGACTATGGGAGCTACTATCGAT  273
V  87.2% (218/250)  IGHV4-31*02  230  ....C.A.T...........C...G...........................G....A............--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD1-26*01  8    -------------------------------------------------------------------------............-----  19
J  95.7% (44/46)    IGHJ4*02     3    -----------------------------------------------------------------------------------------.  3

                                      ---------->                                  
                                      Y  F  D  N  W  G  R  G  T  L  V  T  V  S  S  
                    Query_7448   274  ACTTTGACAACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  318
J  95.7% (44/46)    IGHJ4*02     4    ........T.........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_278331

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            358     3e-101
IGHD6-19*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGGGAG	GCAGTGGC	CCCGGGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGGGAGGCAGTGGCCCCGGGGAC	ARAPGGSGPGD	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	111	3	0	97.4
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  T  S  N  L  W  T  W  V  R  Q  P  P  E  K  G  L 
                    Query_7449   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGTACTAGTAACTTGTGGACTTGGGTCCGCCAGCCCCCAGAAAAGGGGCTG  90
V  96.4% (238/247)  IGHV4-4*02   49   .........................................C.G........G.....G....................GG.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  K  S  K 
                    Query_7449   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAATAGACAAGTCCAAG  180
V  96.4% (238/247)  IGHV4-4*02   139  ...........................................................................G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  A  P  G  G  S  G  P  G 
                    Query_7449   181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCATCTATTACTGTGCGAGAGCCCCGGGAGGCAGTGGCCCCGGG  270
V  96.4% (238/247)  IGHV4-4*02   229  ................................................G.G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD6-19*01  8    ----------------------------------------------------------------------------........------  15

                                      -->                                  
                                       D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7449   271  GACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (36/36)   IGHJ4*02     13   -....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_9342

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD3-16*02                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTATCG	ACATTGGTTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTATTTGACTAT	ARHYRHWLFDY	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	238	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  L  T  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_7450   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCCTCACCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (238/251)  IGHV4-39*01  49   ...............................G....A...G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7450   91   CTGGAGTGGATTGGGAGTTTGTATTATAGTGGCAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  94.8% (238/251)  IGHV4-39*01  139  ..................A.C...........G...............................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  H  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  H  W  L  F 
                    Query_7450   181  AAGAACCACTTGTCCCTGAACCTGAACTCCGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGACATTATCGACATTGGTTATTT  270
V  94.8% (238/251)  IGHV4-39*01  229  ........G..C........G....G...T...........A.............................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-16*02  25   -----------------------------------------------------------------------......-------------  30
J  97.7% (42/43)    IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7450   271  GACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  97.7% (42/43)    IGHJ4*02     9    .....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_8112

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           374     8e-106
IGHD6-13*01                                                                                           21.8    0.041 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	GCAGCAGCTGG	ACTACGT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCAGCAGCTGGACTACGTCTACTTCTACGGTATTGACGTC	ARGQQLDYVYFYGIDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	244	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7451   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAATACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.0% (244/249)  IGHV3-33*01  47   ..........................................G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  N  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7451   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACAATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  98.0% (244/249)  IGHV3-33*01  137  .........................................T...C............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  Q  Q  L  D  Y  V  
                    Query_7451   181  AGAACACGCTGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGCAGCAGCTGGACTACGTCT  270
V  98.0% (244/249)  IGHV3-33*01  227  ...................A.................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  8    ----------------------------------------------------------------------...........---------  18
J  94.5% (52/55)    IGHJ6*02     8    ----------------------------------------------------------------------------------------..  9

                                      T------------------>                                 
                                      Y  F  Y  G  I  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_7451   271  ACTTCTACGGTATTGACGTCTGGGGCCAAGGGACCACGGTCTCCGTCTCCTCA  323
J  94.5% (52/55)    IGHJ6*02     10   ...A.........G...........................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_84510

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         282     3e-78
IGHD3-10*01                                                                                           27.6    7e-04
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CC	TGGTTCGGGGAATTTTTATA	TGTC	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGACCTGGTTCGGGGAATTTTTATATGTCTGCTTTTGAGATT	SRPGSGNFYMSAFEI	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	96	18	0	84.2
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	213	33	0	86.6


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  D  S  S  V  S  S  G  S  F  W  A  W  I  R  Q  S  P  G  R  G  L 
                    Query_7452     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGATTCCTCCGTTAGTAGTGGTTCCTTCTGGGCCTGGATCCGGCAGTCCCCAGGGAGGGGACTG  90
V  86.6% (213/246)  IGHV4-38-2*01  49   ............................G..A....A.C..C.......A..A.....G.............C.........A...G...  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  H  Q  S  G  S  T  Y  Y  S  P  S  F  E  S  R  V  T  M  S  F  D  T  S  Q 
                    Query_7452     91   GAGTGGATTGGGAGTATCCATCAGAGTGGGAGTACCTACTACAGCCCGTCTTTCGAGAGTCGAGTCACCATGTCTTTTGACACGTCTCAG  180
V  86.6% (213/246)  IGHV4-38-2*01  139  ..................T....T........C..........A......CC..A................A..AG.A........CA..  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                         R  Q  F  S  L  Q  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  S  R  P  G  S  G  N  F  Y  M 
                    Query_7452     181  CGTCAGTTCTCCCTGCAGTTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTTTTGTTCGAGACCTGGTTCGGGGAATTTTTATATG  270
V  86.6% (213/246)  IGHV4-38-2*01  229  AAC............A..C...G................................AC...G.....------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  90.0% (18/20)    IGHD3-10*01    10   --------------------------------------------------------------------...........G..A.....--  29

                                        -------------->                                  
                                         S  A  F  E  I  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_7452     271  TCTGCTTTTGAGATTTGGGGCCAAGGGACAAGGGTCACCGTCTCTTCAG  319
J  93.6% (44/47)    IGHJ3*02       4    --.........T..C................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_154439

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           386     1e-109
IGHD3-10*01                                                                                           23.8    0.011 
IGHJ1*01                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TAACGGCG	GGTTCGGGGAGT	N/A	CTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAACGGCGGGTTCGGGGAGTCTGAATACTTCCAGCAC	ARHNGGFGESEYFQH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	249	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_7453   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  99.2% (249/251)  IGHV4-39*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  C  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7453   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACTGCCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  99.2% (249/251)  IGHV4-39*01  139  .............................................AA...........................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  N  G  G  F  G  E 
                    Query_7453   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATAACGGCGGGTTCGGGGAG  270
V  99.2% (249/251)  IGHV4-39*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD3-10*01  11   -------------------------------------------------------------------------------...........  21

                                      ----------------->                                  
                                       S  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7453   271  TCTGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (12/12)   IGHD3-10*01  22   .---------------------------------------------------  22
J  100.0% (51/51)   IGHJ1*01     2    -...................................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_190678

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     1e-95
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	N/A	TCCTTGCCCCCGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCCTTGCCCCCGAACTAC	ASLPPNY	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  T  T  H  T  M  K  W  V  R  Q  A  P  G  K  G  L  
                    Query_7454   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCACTACCCATACCATGAAGTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  94.3% (231/245)  IGHV3-21*01  47   ....................................C.....G..G.T...G......C.................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  T  S  S  S  T  Y  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7454   91   AGTGGGTCGCATCCATTACTAGTAGTAGTACCTACACATACTACACAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.3% (231/245)  IGHV3-21*01  137  ........T.........G...........GT....T.......G.............................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  L  P  P  N  Y  W  G  
                    Query_7454   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGTCCTTGCCCCCGAACTACTGGGGCC  270
V  94.3% (231/245)  IGHV3-21*01  227  ....................................................G............-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  100.0% (39/39)   IGHJ4*02     10   ------------------------------------------------------------------------------............  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_7454   271  AGGGAACCCTGGTCACCGTCTCCTCAG  297
J  100.0% (39/39)   IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_190679

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           307     1e-85
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGTGAGGAAGGA	TACTATGATACTAGTGGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGTGAGGAAGGATACTATGATACTAGTGGTTATTCGGACTAT	AKDGEEGYYDTSGYSDY	239	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	10	1	0	90.9
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	45	6	0	88.2
CDR2-IMGT	101	124	24	20	4	0	83.3
FR3-IMGT	125	238	114	109	5	0	95.6
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	232	214	18	0	92.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  T  P  G  K  G  L  E  W  V  S  T  V  
                    Query_7455   15   GTGCAGTCTCTGGATTCACCTTTAGTAGATATGCCATGTCCTGGGTCCGCCAGACTCCAGGGAAGGGCCTGGAGTGGGTCTCAACAGTGA  104
V  92.2% (214/232)  IGHV3-23*01  65   ......C..................C..C.........AG.............G.............G...............G.TA.T.  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  G  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  M  L  Y  L  
                    Query_7455   105  GTGGTAGTGGAGGTGGCACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACATGCTGTATTTGC  194
V  92.2% (214/232)  IGHV3-23*01  155  ..........T...A..........C....................................................C.......C...  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------------CDR3-IMGT----------------
                                      Q  M  N  S  L  R  T  E  D  T  A  I  Y  Y  C  A  K  D  G  E  E  G  Y  Y  D  T  S  G  Y  S  
                    Query_7455   195  AAATGAACAGCCTGAGAACCGAGGACACGGCCATATATTACTGTGCGAAAGATGGTGAGGAAGGATACTATGATACTAGTGGTTATTCGG  284
V  92.2% (214/232)  IGHV3-23*01  245  .................G..............G...................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  95.5% (21/22)    IGHD3-22*01  5    -----------------------------------------------------------------..........G...........---  26
J  97.5% (39/40)    IGHJ4*02     9    -----------------------------------------------------------------------------------------.  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7455   285  ACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  323
J  97.5% (39/40)    IGHJ4*02     10   ....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_84514

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           377     1e-106
IGHD1-1*01                                                                                            14.1    9.7   
IGHJ2*01                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGCGGTTGAGAGATG	GGTACAA	TTTTCTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGCGGTTGAGAGATGGGTACAATTTTCTCGACTGGTACTTCGATGTC	ATRLRDGYNFLDWYFDV	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	68	6	0	91.9
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	101	13	0	88.6
CDR3-IMGT (germline)	289	292	4	4	0	0	100
Total	N/A	N/A	291	266	25	0	91.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  L  S  C  Q  A  S  G  Y  T  F  N  
                    Query_7456   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAGACTCTCCTGTCAGGCTTCTGGATACACCTTCAACA  91
V  91.4% (266/291)  IGHV5-51*01  2    ..................................A...................AGA........A...G...........G...T.C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_7456   92   ATTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGTATCATCTATCCTGGTGACTCTGATACCACATACA  181
V  91.4% (266/291)  IGHV5-51*01  92   GC.....................................................G............................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  Q  S  F  R  G  Q  V  T  I  S  A  D  T  S  L  R  T  A  Y  L  Q  W  S  G  L  K  A  S  D  
                    Query_7456   182  GTCAGTCCTTCCGAGGCCAAGTCACCATCTCAGCCGACACGTCCCTCCGAACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACA  271
V  91.4% (266/291)  IGHV5-51*01  182  .C.C........A......G...................A....A..A.C.....................A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  T  Y  Y  C  A  T  R  L  R  D  G  Y  N  F  L  D  W  Y  F  D  V  W  G  R  G  T  Q  V  
                    Query_7456   272  CCGCCACTTATTATTGTGCGACGCGGTTGAGAGATGGGTACAATTTTCTCGACTGGTACTTCGATGTCTGGGGCCGTGGCACCCAGGTCA  361
V  91.4% (266/291)  IGHV5-51*01  272  ......TG.....C.......---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD1-1*01   1    ------------------------------------.......-----------------------------------------------  7
J  90.2% (46/51)    IGHJ2*01     3    ---------------------------------------------------..............C..................T.....  41

                                                  
                                      I  V  A  S  
                    Query_7456   362  TTGTCGCGTCAG  373
J  90.2% (46/51)    IGHJ2*01     42   C....T.C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_84515

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     3e-93
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGGGTCCT	TATAGTGGGAGC	CCGCAAGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACTTC	AKPGPYSGSPQGYFDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7457   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTTCGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (230/248)  IGHV3-23*01  47   .............................................G..AT........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  T  E  T  G  R  N  S  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  
                    Query_7457   91   AGTGGGTCTCAACTATTACTGAGACTGGTCGTAATTCATACTACGCAGACTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCA  180
V  92.7% (230/248)  IGHV3-23*01  137  ...........G......G..GT.G....G...GCA............................G....C...............T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  G  P  Y  S  G  S  
                    Query_7457   181  AGAACACACTGTATCTGCAAATGAACACCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAACCGGGTCCTTATAGTGGGAGCC  270
V  92.7% (230/248)  IGHV3-23*01  227  .......G...................G........................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD1-26*01  3    -----------------------------------------------------------------------------............-  14

                                      T------------------>                                  
                                      P  Q  G  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7457   271  CGCAAGGGTACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.8% (45/46)    IGHJ4*02     3    --------..........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_84516

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  N  N  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7458   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-23*01  47   .....................C....................G..G.T.....A....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  L  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_7458   91   AGTGGGTCTCAGCGATTCTTGGGAGCGGTAGTAGCACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  .............T...AG...T..T...G..............G......................................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_7458   181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  93.2% (233/250)  IGHV3-23*01  227  ...............................G....................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_7458   271  ATTCACCCCTTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  97.6% (41/42)    IGHJ4*02     7    ---------...............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_84517

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7459   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7459   91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*01  139  ........GT........T.......G...............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_7459   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.5% (234/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7459   271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_154430

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           378     3e-107
IGHD5-12*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGAGA	TGGCTAC	AATGACCGAGGGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTAGAGATGGCTACAATGACCGAGGGGCCTTTGGCTCC	ARGRDGYNDRGAFGS	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	17	7	0	70.8
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	294	268	26	0	91.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  T  S  G  Y  S  F  D  
                    Query_7460   3    AGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACTTCTGGATACTCCTTCGACA  92
V  91.2% (268/294)  IGHV1-69*12  2    .............G........G.............................................G........GG.A.....AG..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  D  I  R  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  G  I  I  P  V  F  G  T  P  N  Y  
                    Query_7460   93   GTTATGATATTAGATGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGGTGGGAGGGATCATCCCTGTCTTTGGAACACCAAACTACG  182
V  91.2% (268/294)  IGHV1-69*12  92   .C....C...C..C..........................G.........A.................A.......T...G.........  181
                                      S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  A  R  T  V  Y  M  E  L  S  S  L  R  S  D  D  
                    Query_7460   183  CACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCGCGCGCACAGTTTATATGGAGCTGAGTAGCCTGAGATCTGACGACA  272
V  91.2% (268/294)  IGHV1-69*12  182  ............................................A..A......CC..C...........C..............G....  271
                                      A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  V  Y  F  C  A  R  G  R  D  G  Y  N  D  R  G  A  F  G  S  W  G  Q  G  T  L  V  T  V  
                    Query_7460   273  CGGCCGTCTATTTCTGTGCGAGAGGTAGAGATGGCTACAATGACCGAGGGGCCTTTGGCTCCTGGGGCCAGGGAACCCTGGTCACCGTCT  362
V  91.2% (268/294)  IGHV1-69*12  272  .......G....A...........------------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD5-12*01  11   -------------------------------.......----------------------------------------------------  17
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------.....A..A.............................  42

                                            
                                      S  S  
                    Query_7460   363  CCTCAG  368
J  95.5% (42/44)    IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_84519

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           299     2e-83
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GGGCCAGAGA	AGTAGGACC	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGAGGGCCAGAGAAGTAGGACCCTTGACTAC	ATEGQRSRTLDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	247	219	28	0	88.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  N  Y  M  S  W  V  R  Q  A  P  G  M  G  L  
                    Query_7461   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAATAACTATATGAGTTGGGTCCGCCAGGCTCCAGGGATGGGGCTGG  90
V  88.7% (219/247)  IGHV3-53*01  47   ...............................G......G......GC.....C.....C......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  I  Y  S  G  G  G  S  F  Y  T  H  S  V  E  G  R  F  T  I  S  R  D  D  Y  K  
                    Query_7461   91   AGTGGGTCTCTCTTATTTACAGCGGTGGTGGCTCCTTCTACACACACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACGATTACAAGA  180
V  88.7% (219/247)  IGHV3-53*01  137  ..........AG.......T.........A..A.A.A....G..G........A..........................A...C.....  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  T  V  Y  L  Q  M  N  N  V  R  A  E  D  T  A  I  Y  Y  C  A  T  E  G  Q  R  S  R  T  L  
                    Query_7461   181  ACACGGTTTATCTTCAAATGAACAATGTTAGAGCCGAGGACACGGCCATATATTACTGTGCGACAGAGGGCCAGAGAAGTAGGACCCTTG  270
V  88.7% (219/247)  IGHV3-53*01  227  .....C.G................GCC.G..................G.G.............G...-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  88.9% (8/9)      IGHD2-2*01   11   -----------------------------------------------------------------------------.....T...----  19
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_7461   271  ACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  309
J  97.6% (41/42)    IGHJ4*02     10   ...........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_154432

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           318     6e-89
IGHD2-21*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGGGGG	ATTGTGATGGT	ATTAACTGCTTCCCCTGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGGATTGTGATGGTATTAACTGCTTCCCCTGGTACTACTATTATGGAATGCACGTC	AKGDCDGINCFPWYYYYGMHV	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	222	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  L  Y  G  G  S  F  S  G  H  Y  W  I  W  L  R  Q  S  P  G  K  G  L  E 
                    Query_7462   1    ACCCTGTCCCTCACCTGCGCTCTCTATGGTGGGTCCTTCAGTGGTCACTACTGGATTTGGCTCCGCCAGTCCCCCGGGAAGGGGCTGGAG  90
V  92.1% (222/241)  IGHV4-34*01  49   .....................G.......................T.........GC...A........C....A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  K  Y  N  P  S  L  K  S  R  V  A  M  S  I  D  A  S  K  S 
                    Query_7462   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACGAAGTACAACCCGTCCCTCAAGAGTCGAGTCGCCATGTCAATAGACGCGTCCAAGAGT  180
V  92.1% (222/241)  IGHV4-34*01  139  ................................C..C...........................A....A...G.....A.........AC  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  Y  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  G  D  C  D  G  I  N  C  F 
                    Query_7462   181  CAATTCTACCTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAAGGGGGATTGTGATGGTATTAACTGCTTC  270
V  92.1% (222/241)  IGHV4-34*01  229  ..G....C...........G...........................G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (10/11)    IGHD2-21*01  6    -------------------------------------------------------------------......G....------------  16

                                      MGT-------------------------->                                 
                                       P  W  Y  Y  Y  Y  G  M  H  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_7462   271  CCCTGGTACTACTATTATGGAATGCACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  333
J  91.2% (52/57)    IGHJ6*02     6    ------........C..C..T...G...........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_190671

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           394     7e-112
IGHD4-17*01                                                                                           18.0    0.68  
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGG	CTACGGTGA	GTCCGAGTAGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGGCTACGGTGAGTCCGAGTAGTTTCTACTACGGCCTGGACGTC	ARDLATVSPSSFYYGLDV	290	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	72	3	0	96
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	45	6	0	88.2
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	104	10	0	91.2
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	296	274	22	0	92.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_7463   2    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  91
V  92.6% (274/296)  IGHV1-18*01  1    .....T.....G.................G............................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  K  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y 
                    Query_7463   92   AACTATGGTATTACCTGGGTGCGGCAGGCCCCTGGACAGGGACTTAAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTAT  181
V  92.6% (274/296)  IGHV1-18*01  91   .G.........C.G.........A..............A..G...G.........................C......A...........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  M  V  R  D  R  V  T  L  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  V  D  D 
                    Query_7463   182  GCACAGATGGTCCGGGACAGAGTCACCTTGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGAGTTGACGAC  271
V  92.6% (274/296)  IGHV1-18*01  181  .......A.C...A..G..........A......C....................C..........C..............TC.......  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  S  F  Y  Y  G  L  D  V  W  G  Q  G  T  T 
                    Query_7463   272  ACGGCCGTGTATTACTGTGCGAGAGATCTGGCTACGGTGAGTCCGAGTAGTTTCTACTACGGCCTGGACGTCTGGGGCCAAGGGACCACG  361
V  92.6% (274/296)  IGHV1-18*01  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------------.........--------------------------------------------------  12
J  96.2% (50/52)    IGHJ6*02     11   -----------------------------------------------------.........TA..........................  47

                                                     
                                       V  T  V  S  S 
                    Query_7463   362  GTCACCGTCTCCTCA  376
J  96.2% (50/52)    IGHJ6*02     48   ...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_190676

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            378     3e-107
IGHD1-26*01                                                                                           10.3    133   
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGG	GTGGG	CCTACTTATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGGCCTACTTATCCGACCCC	ARARGWAYLSDP	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y
                    Query_7464   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACCACTTA  90
V  91.7% (266/290)  IGHV1-8*01   6    ..................G...............................................T........C..........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F  A  Q
                    Query_7464   91   TGATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTTGCACA  180
V  91.7% (266/290)  IGHV1-8*01   96   .................................A..G..............A..............C.G...T..........A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D  T  A
                    Query_7464   181  GAGATTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGACACGGC  270
V  91.7% (266/290)  IGHV1-8*01   186  ..AG...C............................C.....A.................GC............G..C..AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  Y  C  A  R  A  R  G  W  A  Y  L  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_7464   271  CATATATTACTGTGCGAGAGCCCGGGGGTGGGCCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  352
V  91.7% (266/290)  IGHV1-8*01   276  .G.G................--------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                
D  100.0% (5/5)     IGHD1-26*01  7    ---------------------------.....--------------------------------------------------  11
J  100.0% (40/40)   IGHJ5*02     11   ------------------------------------------........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_154435

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           352     3e-99
IGHD4-17*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	113	1	0	99.1
CDR3-IMGT (germline)	246	248	3	3	0	0	100
Total	N/A	N/A	245	235	10	0	95.9


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_7465   4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  95.9% (235/245)  IGHV4-31*02  50   .....TCC...A.....A...........GG.......A...................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_7465   94   TGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTGGACACGTCTA  183
V  95.9% (235/245)  IGHV4-31*02  140  .................................G.............................................A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  
                    Query_7465   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTT  273
V  95.9% (235/245)  IGHV4-31*02  230  .................................................................-------------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD4-17*01  5    --------------------------------------------------------------------------.......---------  11
J  97.8% (45/46)    IGHJ6*02     17   -------------------------------------------------------------------------------------....A  21

                                      ------->                                 
                                      L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7465   274  TGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  97.8% (45/46)    IGHJ6*02     22   .........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_190674

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           357     1e-100
IGHD1-26*01                                                                                           18.0    0.56  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	AGCA	AGTGGGAGC	CTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAAGCAAGTGGGAGCCTTATGACTCC	ARSKWEPYDS	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  T  Y  W  M  R  W  V  R  Q  A  P  G  K  G  L  
                    Query_7466   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGTACCTACTGGATGCGCTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-74*01  47   ....................................C........G...........A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  K  S  D  G  S  S  G  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7466   91   TGTGGGTCTCACGTATTAAAAGTGATGGGAGTAGCGGAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (238/248)  IGHV3-74*01  137  ...................T...............AC..G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  H  M  N  N  L  R  A  E  D  T  A  L  Y  Y  C  A  R  S  K  W  E  P  Y  D  
                    Query_7466   181  AGAACACGCTGTATCTGCACATGAACAATCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCAAGAAGCAAGTGGGAGCCTTATGACT  270
V  96.0% (238/248)  IGHV3-74*01  227  ...................A.......G......................G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD1-26*01  6    ------------------------------------------------------------------------.........---------  14
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7466   271  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_190675

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            427     1e-121
IGHD3-9*01                                                                                            18.0    0.68  
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGTCAT	TTACGATAT	ACGGGCCGGGT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTCATTTACGATATACGGGCCGGGTCTGGTTCGACCCC	ARGGHLRYTGRVWFDP	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	73	2	0	97.3
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	284	11	0	96.3


Alignments

                                     <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                      Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_7467  2    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACC  91
V  96.3% (284/295)  IGHV1-2*04  1    ...G...................G..................................................................  90
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                     GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                      D  Y  Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  D  P  N  S  G  G  T  K  Y 
                    Query_7467  92   GACTACTATGTGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCGACCCTAACAGTGGTGGCACAAAGTAT  181
V  96.3% (284/295)  IGHV1-2*04  91   .G.......A..............................................A......A......................C...  180
                                      G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                     -----------------------------------------------FR3-IMGT-----------------------------------
                                      A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  N  R  L  R  S  D  D 
                    Query_7467  182  GCACAGAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAACTGAACAGACTGAGATCTGACGAC  271
V  96.3% (284/295)  IGHV1-2*04  181  .................................................................G....G...G...............  270
                                      A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                     -----------------><-------------------CDR3-IMGT------------------>                        
                                      T  A  V  Y  Y  C  A  R  G  G  H  L  R  Y  T  G  R  V  W  F  D  P  W  G  Q  G  D  L  V  T 
                    Query_7467  272  ACGGCCGTATATTACTGTGCGAGAGGGGGTCATTTACGATATACGGGCCGGGTCTGGTTCGACCCCTGGGGCCAGGGAGACCTGGTCACC  361
V  96.3% (284/295)  IGHV1-2*04  271  ........G................-----------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (9/9)     IGHD3-9*01  4    ---------------------------------.........------------------------------------------------  12
J  95.7% (45/47)    IGHJ5*02    5    -----------------------------------------------------.........................AC..........  41

                                               
                                      V  S  S  
                    Query_7467  362  GTCTCCTCAG  371
J  95.7% (45/47)    IGHJ5*02    42   ..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_108530

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*13                                                                                           371     7e-105
IGHD1-1*01                                                                                            16.1    2.3   
IGHJ4*02                                                                                              52.6    5e-11 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*13	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGGA	GTACTG	ACTGGAAC	CACATCGGCGACC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGAGTACTGACTGGAACCACATCGGCGACCTTGACTTC	ARSTDWNHIGDLDF	263	304	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	44	2	0	95.7
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	148	21	20	1	0	95.2
FR3-IMGT	149	262	114	108	6	0	94.7
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	269	253	16	0	94.1


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  S  F  S  G  F  S  L  R  S  R  G  M  C  V  T  W  I  R
                    Query_7468   1    GCTGGTGAAACCCACACAGACCCTAACACTGACCTGCAGCTTCTCTGGATTCTCACTCAGAAGTCGTGGAATGTGTGTGACCTGGATCCG  90
V  94.1% (253/269)  IGHV2-70*13  30   ........................C.............C.........G...........C.C.A...............G.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  E  D  D  K  R  Y  S  T  S  L  K  T  R  L  A
                    Query_7468   91   CCAGCCCCCAGGGAAGGCCCTAGAGTGGCTTGCACTCATTGATTGGGAGGATGATAAACGCTACAGCACATCTCTGAAGACCAGGCTCGC  180
V  94.1% (253/269)  IGHV2-70*13  120  T....................G..........................T.........TA............................A.  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  A  D  T  A  T  Y  Y  C  A  R  S
                    Query_7468   181  CATCTCCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGCTGACACAGCCACATATTATTGTGCACGGAG  270
V  94.1% (253/269)  IGHV2-70*13  210  ...........................................................TG...........G................-  298
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                      ---------CDR3-IMGT--------------->                                  
                                        T  D  W  N  H  I  G  D  L  D  F  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_7468   271  TACTGACTGGAACCACATCGGCGACCTTGACTTCTGGGGCCAGGGAAGTCTCGTCATCGTCTCCTCAG  338
D  100.0% (8/8)     IGHD1-1*01   7    -----........-------------------------------------------------------  14
J  88.1% (37/42)    IGHJ4*02     7    --------------------------......A..............CC..G....C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_108531

Length=222
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         174     5e-46
IGHD4-17*01                                                                                           10.3    82   
IGHJ1*01                                                                                              33.4    2e-05


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-17*01	IGHJ1*01	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTCT	ACCA	TACGG	GCCTAA	CCTCG	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	40	11	0	78.4
CDR2-IMGT	146	163	18	15	3	0	83.3
Total	N/A	N/A	163	137	26	0	84


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  E  K  P  G  Q  S  L  R  I  S  C  *  G  S  G  Y  I  F  I  N  *
                    Query_7469     1    GCAGCTGGTGCAGTCTGGAGCAGAAGTGGAAAAGCCCGGGCAGTCTCTGAGGATCTCCTGTTAGGGCTCTGGATACATCTTTATAAATTA  90
V  84.0% (137/163)  IGHV5-10-1*01  6    ........................G...A...........G....................A....T..........G.....CC.GC..  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------>           
                                          C  L  N  W  V  Y  W  M  P  G  R  G  L  E  W  V  G  T  I  N  S  N  D  S  T  I  R  A  *  P
                    Query_7469     91   GTGTTTGAACTGGGTGTACTGGATGCCCGGGAGAGGCCTGGAGTGGGTGGGGACCATTAATTCTAATGACTCTACCATACGGGCCTAACC  180
V  84.0% (137/163)  IGHV5-10-1*01  96   C..GA.C.G.......CG.CA...........A.............A......GG...G..C...G.......-----------------  168
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S                  
D  100.0% (5/5)     IGHD4-17*01    5    -----------------------------------------------------------------------------.....--------  9
J  95.0% (19/20)    IGHJ1*01       33   ----------------------------------------------------------------------------------------..  34

                                                          
                                          R  H  R  L  L   
                    Query_7469     181  TCGTCACCGTCTCCTCAG  198
J  95.0% (19/20)    IGHJ1*01       35   .G................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 20774040


Query= Query_108532

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43D*01                                                                                          358     4e-101
IGHD1-26*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              106     3e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43D*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAA	GGCAAC	GTATAGTGGGACCTACTA	TCCGAATAG	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGGCAACGTATAGTGGGACCTACTATCCGAATAGTTACTACTACTACAACGCTATGGACGTC	AKATYSGTYYPNSYYYYNAMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  A  L  
                    Query_7470    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCGGGGAAGGCTCTCG  90
V  96.4% (238/247)  IGHV3-43D*01  47   ....................................................................................G...G.  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  S  L  I  T  W  G  P  V  S  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_7470    91   AGTGGGTCTCTCTTATTACTTGGGGTCCTGTTAGCACATACTATGCAGACTCTGTGAGGGGTCGATTCACCATCTCCAGAGACAACAGCA  180
V  96.4% (238/247)  IGHV3-43D*01  137  ..................G.....A.GG..G......C...................A................................  226
                                       E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><---------------------------
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  A  T  Y  S  G  T  Y  
                    Query_7470    181  AAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACCGCCTTGTATTACTGTGCAAAGGCAACGTATAGTGGGACCTACT  270
V  96.4% (238/247)  IGHV3-43D*01  227  ...................................................................-----------------------  293
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  94.4% (17/18)    IGHD1-26*01   2    -------------------------------------------------------------------------...........G.....  18

                                       -CDR3-IMGT--------------------------->                                 
                                       Y  P  N  S  Y  Y  Y  Y  N  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7470    271  ATCCGAATAGTTACTACTACTACAACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  94.4% (17/18)    IGHD1-26*01   19   .----------------------------------------------------------------------  19
J  96.7% (59/61)    IGHJ6*02      2    ----------.............T...G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_108533

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD6-13*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	ARHRYLGPRQQATENDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  Q  G  S  G  Y  T  F  T  T  Y
                    Query_7471   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTACCACCTA  90
V  96.2% (280/291)  IGHV5-51*01  6    ..........................................G..................A...............G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  P  R  Y  S  P
                    Query_7471   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAGTCATCTATCCTGGTGACTCTGATCCCAGATACAGCCC  180
V  96.2% (280/291)  IGHV5-51*01  96   ........G..........................................GA.......................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7471   181  GTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (280/291)  IGHV5-51*01  186  ......................A................................C..........C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_7471   271  CATGTATTACTGTGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  96.2% (280/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-13*01  8    ---------------------------------------.......--------------------------------------------  14
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_7471   361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_108534

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            357     1e-100
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	237	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	24	0	0	100
FR3-IMGT	123	236	114	113	1	0	99.1
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	232	230	2	0	99.1


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  
                    Query_7472   13   GTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAA  102
V  99.1% (230/232)  IGHV3-7*01   65   .........................T................................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_7472   103  AGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGC  192
V  99.1% (230/232)  IGHV3-7*01   155  ................................................T.........................................  244
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-----------------------CDR3-IMGT-------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  I  D  Y  Y  Y  Y  
                    Query_7472   193  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACG  282
V  99.1% (230/232)  IGHV3-7*01   245  ....................................................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------..........----------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---------------------------------------------------------------------------.......C..C....  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7472   283  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  96.6% (57/59)    IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_108535

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           366     2e-103
IGHD3-16*01                                                                                           16.1    2.4   
IGHJ6*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACAGTAGCGGCTGGTA	TTGGGGGGGTT	CG	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGTAGCGGCTGGTATTGGGGGGGTTCGGGTATGGACGTC	ARYSSGWYWGGSGMDV	267	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	80	30	25	5	0	83.3
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	152	21	19	2	0	90.5
FR3-IMGT	153	266	114	107	7	0	93.9
CDR3-IMGT (germline)	267	272	6	6	0	0	100
Total	N/A	N/A	272	253	19	0	93


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  I  C  S  V  S  G  D  S  I  S  T  S  G  H  Y  W  G  W  
                    Query_7473   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCATTTGCAGTGTCTCTGGTGATTCCATCAGCACTAGTGGTCACTACTGGGGCTGGA  90
V  93.0% (253/272)  IGHV4-39*01  26   ................T...................CC....C...........GC..........G....A..T...............  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  N  Y  S  G  T  T  H  D  N  P  S  L  K  S  R  
                    Query_7473   91   TCCGCCAGCCCCCAGGGAAGGGGTTGGAGTGGATTGGGAGTATCAATTATAGTGGGACCACCCACGACAACCCGTCCCTCAAGAGTCGAC  180
V  93.0% (253/272)  IGHV4-39*01  116  .......................C....................T............G....T..T.......................G  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      L  T  I  S  V  D  T  S  K  N  Q  L  S  L  K  L  N  S  V  T  T  A  D  T  A  V  Y  Y  C  A  
                    Query_7473   181  TCACCATATCCGTAGACACGTCCAAGAACCAGTTGTCCCTGAAGCTGAACTCTGTGACCACCGCAGACACGGCTGTGTATTATTGTGCGA  270
V  93.0% (253/272)  IGHV4-39*01  206  ..................................C.............G..........G......................C.......  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------CDR3-IMGT------------------>                                 
                                      R  Y  S  S  G  W  Y  W  G  G  S  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_7473   271  GATACAGTAGCGGCTGGTATTGGGGGGGTTCGGGTATGGACGTCTGGGGCCAAGGGACTACGGTCATCGTCTCCTCA  347
V  93.0% (253/272)  IGHV4-39*01  296  ..---------------------------------------------------------------------------  297
                                      R                                                                            
D  90.9% (10/11)    IGHD3-16*01  16   -------------------.......A...-----------------------------------------------  26
J  95.6% (43/45)    IGHJ6*02     18   --------------------------------..........................C.......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_108536

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           321     6e-90
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_7474   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_7474   91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_7474   181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.8% (225/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_7474   271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_108537

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           280     1e-77
IGHD1-26*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCG	TAGAGGGAGC	AACAGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCGTAGAGGGAGCAACAGTTTTTGACTAC	AKVVEGATVFDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	10	1	0	90.9
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	44	7	0	86.3
CDR2-IMGT	102	125	24	15	9	0	62.5
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	231	205	26	0	88.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  G  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  G  I  
                    Query_7475   16   GTGCAGTCTCTGGATTCACCTTTGGCAGTTATGCCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGACTGGAGTGGGTGGCGGGTATCA  105
V  88.7% (205/231)  IGHV3-23*01  65   ......C................A....C..........GC..........................G...........CT.A.C...T.  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  N  K  G  R  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  E  K  T  L  Y  L  
                    Query_7475   106  GTAACAAAGGTCGGAACACATATTACGCAGACTCCGTGAAGGGCCGGTTCACCATTTCCAGAGACAATTCCGAGAAGACGCTATATCTCC  195
V  88.7% (205/231)  IGHV3-23*01  155  ..GGT.GT...G.T.G......C................................C...............A....C.....G.....G.  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------CDR3-IMGT------------>          
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  V  V  E  G  A  T  V  F  D  Y  W  G  Q  
                    Query_7475   196  AAATGAACAGTCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTCGTAGAGGGAGCAACAGTTTTTGACTACTGGGGCCAGG  285
V  88.7% (205/231)  IGHV3-23*01  245  ..........C........................................---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  90.0% (9/10)     IGHD1-26*01  5    ------------------------------------------------------...T......--------------------------  14
J  97.7% (42/43)    IGHJ4*02     6    -----------------------------------------------------------------------...................  24

                                                              
                                      G  T  L  V  A  V  S  S  
                    Query_7475   286  GAACCCTGGTCGCCGTCTCCTCAG  309
J  97.7% (42/43)    IGHJ4*02     25   ...........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_108538

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           413     2e-117
IGHD4-17*01                                                                                           18.0    0.68  
IGHJ6*01                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAG	CTACGGTGA	GTCCGAGTACTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTC	ARDLATVSPSTFYYGMDV	289	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	280	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  T 
                    Query_7476   1    CAGGTTCAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCTTCTGGTTACACCTTTACC  90
V  94.6% (280/296)  IGHV1-18*04  1    ..........................T..........................................G....................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y 
                    Query_7476   91   AGTTACGGTATCACTTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTAT  180
V  94.6% (280/296)  IGHV1-18*04  91   ..C..........GC........A..............A................................C......A...........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  S  D  D 
                    Query_7476   181  GCACAGATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGATCTGACGAC  270
V  94.6% (280/296)  IGHV1-18*04  181  .......A.C...A..G.................C....................C..........C.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  T  F  Y  Y  G  M  D  V  W  G  Q  G  T  T 
                    Query_7476   271  ACGGCCGTGTATTACTGTGCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTCTGGGGTCAAGGGACCACG  360
V  94.6% (280/296)  IGHV1-18*04  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------------.........--------------------------------------------------  12
J  98.1% (52/53)    IGHJ6*01     11   -----------------------------------------------------........................G............  47

                                                      
                                       V  T  V  S  S  
                    Query_7476   361  GTCACCGTCTCCTCAG  376
J  98.1% (52/53)    IGHJ6*01     48   ................  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_108539

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            366     2e-103
IGHD3-3*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGTAGTCAAG	ACGATTTTTGGAGTGGTT	TGTTCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTAGTCAAGACGATTTTTGGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTC	ARDGSQDDFWSGLFHYYYGMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  P  P  G  K  G  L  
                    Query_7477  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGGTATTGGATGAGTTGGGTCCGCCAACCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-7*03  47   ..............................................C...........C...........GG..................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_7477  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (242/250)  IGHV3-7*03  137  ........................................................A.................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><---------------------------
                                     K  N  S  V  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  Q  D  D  F  
                    Query_7477  181  AGAACTCAGTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAGAGATGGTAGTCAAGACGATTTTT  270
V  96.8% (242/250)  IGHV3-7*03  227  ........C........C..................................G.................--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-3*01  6    ---------------------------------------------------------------------------------.........  14

                                     -CDR3-IMGT--------------------------->                                 
                                     W  S  G  L  F  H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7477  271  GGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  100.0% (18/18)   IGHD3-3*01  15   .........--------------------------------------------------------------  23
J  96.4% (54/56)    IGHJ6*02    7    ---------------.......C..C.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_344977

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           438     5e-125
IGHD6-13*01                                                                                           12.2    35    
IGHJ3*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGGAAGCGGGCCGCACA	TGGTAC	GC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGGAAGCGGGCCGCACATGGTACGCCTTTTGATATC	AWKRAAHGTPFDI	285	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	71	70	70	0	0	100
CDR1-IMGT	72	95	24	23	1	0	95.8
FR2-IMGT	96	146	51	51	0	0	100
CDR2-IMGT	147	170	24	24	0	0	100
FR3-IMGT	171	284	114	112	2	0	98.2
CDR3-IMGT (germline)	285	287	3	3	0	0	100
Total	N/A	N/A	286	283	3	0	99


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_7478   2    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCACCTA  91
V  99.0% (283/286)  IGHV5-51*01  6    ......................................................................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_7478   92   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  181
V  99.0% (283/286)  IGHV5-51*01  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7478   182  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  271
V  99.0% (283/286)  IGHV5-51*01  186  ............................................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        I  Y  Y  C  A  W  K  R  A  A  H  G  T  P  F  D  I  W  G  Q  G  T  M  V  S  V  S  S  
                    Query_7478   272  CATTTATTACTGTGCGTGGAAGCGGGCCGCACATGGTACGCCTTTTGATATCTGGGGCCAGGGGACTATGGTCAGCGTCTCTTCAG  357
V  99.0% (283/286)  IGHV5-51*01  276  ...G............----------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                       
D  100.0% (6/6)     IGHD6-13*01  16   ---------------------------------......-----------------------------------------------  21
J  93.3% (42/45)    IGHJ3*02     6    -----------------------------------------...................A.....A.......C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_294826

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     2e-95
IGHD3-10*01                                                                                           10.3    117  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_7479   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-21*01  47   ............................................AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  E  Y  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_7479   91   AGTGGGTCTCATCCATTAGTAGTACTAGTGAATACATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  93.6% (233/249)  IGHV3-21*01  137  ........................G....AGT........C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_7479   181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTT  270
V  93.6% (233/249)  IGHV3-21*01  227  ............A......A..............................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7479   271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_294827

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           355     3e-100
IGHD1-7*01                                                                                            16.1    2.2   
IGHJ2*01                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-7*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TCTCAGGGAGTCGG	GGAACTAC	GGAG	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTCTCAGGGAGTCGGGGAACTACGGAGTGGTACTTCGATCTC	ARVSGSRGTTEWYFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7480   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACTTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-74*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  M  K  S  D  G  S  S  T  S  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  S  A  
                    Query_7480   91   TGTGGGTCTCACGTATGAAAAGCGATGGAAGTAGCACAAGCTACGCGGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAGCGCCA  180
V  95.6% (238/249)  IGHV3-74*01  137  ................T..T..T.....G...........................A...........................A.....  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  S  G  S  R  G  T  
                    Query_7480   181  GGAACACGTTGTATCTGCAAATGAACAGTCTGAGGGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGTCTCAGGGAGTCGGGGAACTA  270
V  95.6% (238/249)  IGHV3-74*01  227  A.......C.........................A..................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-7*01   10   -----------------------------------------------------------------------------------.......  16

                                      T------------------>                                  
                                      T  E  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_7480   271  CGGAGTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  100.0% (8/8)     IGHD1-7*01   17   .-----------------------------------------------------  17
J  100.0% (49/49)   IGHJ2*01     5    -----.................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_294824

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           396     2e-112
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  Y
                    Query_7481   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCTA  90
V  93.5% (272/291)  IGHV5-51*01  6    .................................................................G............C......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  V  V  Y  P  D  D  S  D  A  R  Y  S  P
                    Query_7481   91   CTGGATCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGGTCGTCTATCCTGATGACTCTGATGCCAGATACAGCCC  180
V  93.5% (272/291)  IGHV5-51*01  96   ..................C..G.........A..........G.........A..A.........G..........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  I  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_7481   181  GTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.5% (272/291)  IGHV5-51*01  186  .......C.......GG............................C...........G......A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_7481   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  93.5% (272/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_7481   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_294825

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD1-1*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCCTAGGACCGGATAAAGAC	ACAACTG	AGGACGCCCTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCTAGGACCGGATAAAGACACAACTGAGGACGCCCTTTACTTTGACTCC	ATLGPDKDTTEDALYFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	228	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7482   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAATTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (228/246)  IGHV3-23*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  N  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7482   91   AGTGGGTCTCAGCTATCAGTGGTAGTGGTAATAACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.7% (228/246)  IGHV3-23*01  137  ................T............GG..G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  S  T  L  F  L  Q  I  H  G  L  R  A  D  D  T  A  I  Y  L  C  A  T  L  G  P  D  K  D  T  
                    Query_7482   181  GGAGCACACTGTTTCTGCAGATACACGGCCTGAGAGCCGACGACACGGCCATATATTTATGTGCGACCCTAGGACCGGATAAAGACACAA  270
V  92.7% (228/246)  IGHV3-23*01  227  A..A...G....A......A..GA..A.............G.........G......AC.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD1-1*01   4    --------------------------------------------------------------------------------------....  7

                                      IMGT--------------------->                                  
                                      T  E  D  A  L  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7482   271  CTGAGGACGCCCTTTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (7/7)     IGHD1-1*01   8    ...---------------------------------------------------------  10
J  97.8% (45/46)    IGHJ4*02     3    --------------..........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_294822

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7483   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_7483   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_7483   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  93.1% (54/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  I  I  V  S  S 
                    Query_7483   271  GTCTGGGGCCAAGGGACCACGATCATCGTCTCCTCA  306
J  93.1% (54/58)    IGHJ6*02     27   .....................G...C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_294823

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           402     3e-114
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	TCCTCC	GGGTATATCAGTGGCTGG	GACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGATCCTCCGGGTATATCAGTGGCTGGGACGACTACAGCGCTATGGACGTC	AGSSGYISGWDDYSAMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  F
                    Query_7484   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGTAGTTT  90
V  94.5% (273/289)  IGHV1-69*01  6    ..................G.................................................................C..C.A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  A  L  F  G  I  P  N  Y  A  Q
                    Query_7484   91   TGCTATCAGCTGGGTGCGACAGGCCCCAGGACAAGGGCTTGAGTGGATGGGAGGGATCATCGCTCTCTTTGGAATACCAAACTACGCACA  180
V  94.5% (273/289)  IGHV1-69*01  96   ...........................T.................................C..A.......T.C.G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        G  F  Q  G  R  V  M  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_7484   181  GGGGTTCCAGGGCAGAGTCATGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTAAGATCTGAGGACACGGC  270
V  94.5% (273/289)  IGHV1-69*01  186  .AA.................C...................................................G.................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  G  S  S  G  Y  I  S  G  W  D  D  Y  S  A  M  D  V  W  G  Q  G  T  T  V  T
                    Query_7484   271  CGTCTATTACTGTGCGGGATCCTCCGGGTATATCAGTGGCTGGGACGACTACAGCGCTATGGACGTCTGGGGCCAAGGGACCACGGTCAC  360
V  94.5% (273/289)  IGHV1-69*01  276  ...G............A..-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  94.4% (17/18)    IGHD6-19*01  1    -------------------------.......G..........-----------------------------------------------  18
J  94.3% (50/53)    IGHJ6*02     10   -----------------------------------------------.....TA..G.................................  52

                                                
                                        V  S  S 
                    Query_7484   361  CGTCTCCTCA  370
J  94.3% (50/53)    IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_294820

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            382     4e-108
IGHD3-3*01                                                                                            27.6    8e-04 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GTCAGTCGGG	GATTTTTGGAGTGG	AG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGACGTCAGTCGGGGATTTTTGGAGTGGAGTTTGACTAC	AHRRQSGIFGVEFDY	263	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	45	1	0	97.8
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	47	4	0	92.2
CDR2-IMGT	128	148	21	20	1	0	95.2
FR3-IMGT	149	262	114	110	4	0	96.5
CDR3-IMGT (germline)	263	272	10	10	0	0	100
Total	N/A	N/A	272	258	14	0	94.9


Alignments

                                     <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  D  G  E  G  V  G  W  I  R
                    Query_7485  1    GCTGGTGAAACCCACACAGACCCTCACGCTGACGTGCACCTTCTCTGGGTTCTCACTCAGTACTGATGGAGAGGGTGTGGGCTGGATCCG  90
V  94.9% (258/272)  IGHV2-5*01  30   .................................C..........................C...AG.....T..................  119
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                     -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                       Q  S  P  G  K  A  P  E  W  L  A  F  I  Y  W  N  D  D  M  R  Y  S  P  S  Q  K  S  R  L  T
                    Query_7485  91   TCAGTCCCCAGGAAAGGCCCCGGAATGGCTTGCATTCATTTATTGGAATGATGATATGCGCTACAGCCCATCTCAGAAGAGCAGGCTCAC  180
V  94.9% (258/272)  IGHV2-5*01  120  ....C...............T...G.........C.....................A.................T...............  209
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                     ---------------------FR3-IMGT----------------------------------------------------><-------
                                       I  T  K  D  T  S  R  N  Q  V  V  L  T  M  T  D  M  D  P  V  D  T  A  T  Y  Y  C  A  H  R
                    Query_7485  181  CATCACCAAGGACACCTCCAGAAACCAAGTGGTCCTTACAATGACCGACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAG  270
V  94.9% (258/272)  IGHV2-5*01  210  ....................A......G..................A...........................................  299
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  R

                                     ----------CDR3-IMGT----------------->                                
                                       R  Q  S  G  I  F  G  V  E  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7485  271  ACGTCAGTCGGGGATTTTTGGAGTGGAGTTTGACTACTGGGGCCAGGGAACACTGGTCACCGTCTCCTC  339
V  94.9% (258/272)  IGHV2-5*01  300  ..-------------------------------------------------------------------  301
                                                                                                          
D  100.0% (14/14)   IGHD3-3*01  8    ------------..............-------------------------------------------  21
J  97.6% (40/41)    IGHJ4*02    6    ----------------------------.......................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_294821

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           416     2e-118
IGHD4-17*01                                                                                           16.1    2.5   
IGHJ3*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAATGG	TGACTTCGGTG	TTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAATGGTGACTTCGGTGTTCTTGATATT	ARDNGDFGVLDI	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	74	1	0	98.7
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	296	281	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T 
                    Query_7486   2    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACAGTTTCACC  91
V  94.9% (281/296)  IGHV1-46*01  1    .......................G..........................................................CC......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  H  Y  M  H  W  V  R  Q  V  P  G  L  G  L  E  W  M  G  I  I  N  P  S  G  G  R  T  S  Y 
                    Query_7486   92   ACCCACTATATGCACTGGGTGCGACAGGTCCCTGGACTAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGGACAAGTTAT  181
V  94.9% (281/296)  IGHV1-46*01  91   .G.T........................C........A..........................................C.....C..C  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  R  S  T  S  T  V  Y  M  E  M  N  G  L  R  S  E  D 
                    Query_7486   182  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACAGGTCCACGAGTACAGTCTACATGGAGATGAACGGCCTGAGATCTGAGGAC  271
V  94.9% (281/296)  IGHV1-46*01  181  ........................................C.........C...............C...G.A.................  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  V  Y  Y  C  A  R  D  N  G  D  F  G  V  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7486   272  ACGGCCGTGTATTACTGTGCGAGAGATAATGGTGACTTCGGTGTTCTTGATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  359
V  94.9% (281/296)  IGHV1-46*01  271  ..........................--------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                 
D  90.9% (10/11)    IGHD4-17*01  1    --------------------------------.....A.....---------------------------------------------  11
J  97.6% (41/42)    IGHJ3*02     9    ----------------------------------------------.......C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_344975

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     5e-96
IGHD6-19*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAGATATCTCC	TAGCAGTGGCTGGT	CAACACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGATATCTCCTAGCAGTGGCTGGTCAACACCTCTATTTGACTAC	ARQISPSSGWSTPLFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  T  Y  T  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_7487   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTACCTATACCATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (233/248)  IGHV3-21*01  47   ....................G........................G.....G....A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  S  F  I  N  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7487   91   AGTGGGTCTCATCCATCAGTAGTAGAGGTAGTTTCATAAATTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (233/248)  IGHV3-21*01  137  ................T........TA......A....T.C............G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  I  S  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  S  S  G  
                    Query_7487   181  AGAACTCACTGTATCTGCAAATAAGCAGCCTGAGAGGCGAGGACACGGCTGTTTATTACTGTGCGAGACAGATATCTCCTAGCAGTGGCT  270
V  94.0% (233/248)  IGHV3-21*01  227  ......................G.A...........C...............G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD6-19*01  6    -------------------------------------------------------------------------------...........  16

                                      GT-------------------->                                  
                                      W  S  T  P  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7487   271  GGTCAACACCTCTATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (14/14)   IGHD6-19*01  17   ...------------------------------------------------------  19
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_294829

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           333     1e-93
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACAAGGGGATAA	CTATAGTTAC	GAATCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACAAGGGGATAACTATAGTTACGAATCT	AQGDNYSYES	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	241	2	2	0	0	100
Total	N/A	N/A	241	227	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  W  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_7488   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTTGGAACTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.2% (227/241)  IGHV3-53*01  47   ............................................A.C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  A  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  K  
                    Query_7488   91   AGTGGGTCTCAGTCATTTATGCCGGTGGTAGCACATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  94.2% (227/241)  IGHV3-53*01  137  .............T......AG...............C..C........................................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------CDR3-IMGT---------> 
                                      K  V  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  Q  G  D  N  Y  S  Y  E  S  
                    Query_7488   181  AAGTGTTGTATCTTCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCACAAGGGGATAACTATAGTTACGAATCTT  270
V  94.2% (227/241)  IGHV3-53*01  227  .CAC.C.............G.........................................-----------------------------  287
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  90.0% (9/10)     IGHD5-18*01  11   -------------------------------------------------------------------------....G.....-------  20
J  97.1% (33/34)    IGHJ4*02     15   -----------------------------------------------------------------------------------------.  15

                                                                       
                                      W  G  R  G  T  L  V  T  V  S  S  
                    Query_7488   271  GGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  303
J  97.1% (33/34)    IGHJ4*02     16   ......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_8119

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            364     5e-103
IGHD3-3*01                                                                                            27.6    8e-04 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGGGGACTTCGGA	ATTTTTGGAGTGGT	GCATACCTAGGGGC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGGGGACTTCGGAATTTTTGGAGTGGTGCATACCTAGGGGCTATGGACGTC	ARVGGLRNFWSGAYLGAMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  R  L  T  F  S  S  D  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7489  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTCGATTAACGTTTAGTAGTGATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-7*03  47   .............................G....C..C........CT..........................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7489  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAGTACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (241/249)  IGHV3-7*03  137  .....................................A....................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------------CD
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  G  L  R  N  F  
                    Query_7489  181  AGAACTCACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAGAGTAGGGGGACTTCGGAATTTTT  270
V  96.8% (241/249)  IGHV3-7*03  227  ............................C.......................G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD3-3*01  9    ------------------------------------------------------------------------------------......  14

                                     R3-IMGT------------------------>                                 
                                     W  S  G  A  Y  L  G  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7489  271  GGAGTGGTGCATACCTAGGGGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  100.0% (14/14)   IGHD3-3*01  15   ........---------------------------------------------------------  22
J  100.0% (43/43)   IGHJ6*02    20   ----------------------...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_192494

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           37.2    1e-06 
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAG	TTACTTTGATAGTAGTGGTTAT	GCTCAGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTACTTTGATAGTAGTGGTTATGCTCAGGACGGTATGGACGTC	ARESYFDSSGYAQDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7490   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  S  I  S  S  S  S  N  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7490   91   ACTGGGTCTCATCCATTAGTAGTAGTAGTAATTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  .G............................G...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  R  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  S  Y  F  D  S  S  
                    Query_7490   181  AGAACTCACTGTATCTGCAAATGAACAGGCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAAAGTTACTTTGATAGTAGTG  270
V  98.4% (246/250)  IGHV3-21*01  227  ............................C.........................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.5% (21/22)    IGHD3-22*01  4    -------------------------------------------------------------------------.....A...........  20

                                      IMGT--------------------->                                 
                                      G  Y  A  Q  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7490   271  GTTATGCTCAGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  95.5% (21/22)    IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_154280

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           339     1e-95
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	N/A	N/A	GGGGCCTGTG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGCCTGTGTACTTTGACCAC	AKGPVYFDH	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7491   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-23*01  47   ....................G....................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  I  G  G  G  D  I  T  Y  Y  A  D  S  V  N  G  R  F  T  I  S  R  D  N  S  
                    Query_7491   91   AGTGGGTCTCAAGTATTATTGGTGGTGGTGATATCACATACTATGCAGACTCCGTCAACGGCCGGTTCACCATCTCCAGAGACAATTCGA  180
V  93.9% (232/247)  IGHV3-23*01  137  ...........GC.....G....A......G..G.........C...........G..G.............................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  T  L  Y  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  P  V  Y  F  D  H  
                    Query_7491   181  AGAATACGCTTTATCTGCAAATGAACGGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGGGGCCTGTGTACTTTGACCACT  270
V  93.9% (232/247)  IGHV3-23*01  227  ....C.....G...............A........................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  91.3% (42/46)    IGHJ4*02     3    -----------------------------------------------------------------------------.........T...  15

                                                                       
                                      W  G  Q  G  R  L  V  T  V  S  S  
                    Query_7491   271  GGGGCCAGGGAAGGTTGGTCACCGTCTCCTCAG  303
J  91.3% (42/46)    IGHJ4*02     16   ............CCC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_334670

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           346     2e-97
IGHD1-1*01                                                                                            10.3    118  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTA	GCCCCCAACCCCGATGGCA	ACAAC	CTA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGCCCCCAACCCCGATGGCAACAACCTACC	SPQPRWQQPT	249	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	249	1	1	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  I  F  S  T  T  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7492   1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCATTTTCAGTACCACCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-15*01  47   .......T...............G............C........A.G.........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  I  D  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_7492   91   AGTGGGTTGGCCGTATTAAAAGCAAAATTGATGGTGAGACAACAGACTACGCTGCACCCGTGAAGGGCAGATTCACCATCTCAAGAGATG  180
V  94.4% (235/249)  IGHV3-15*01  137  ...........................C........G...........................A.........................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  E  T  E  D  T  A  L  Y  Y  C  S  P  Q  P  R  W  Q  
                    Query_7492   181  ATTCAAAAAACACGCTGTATTTGCAAATGAACAGCCTGGAAACCGAGGACACAGCCCTTTACTACTGTAGCCCCCAACCCCGATGGCAAC  270
V  94.4% (235/249)  IGHV3-15*01  227  ....................C.................A.................G.G..T.......---------------------  295
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  100.0% (5/5)     IGHD1-1*01   4    ----------------------------------------------------------------------------------------..  5

                                      ------->                                  
                                      Q  P  T  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7492   271  AACCTACCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
D  100.0% (5/5)     IGHD1-1*01   6    ...---------------------------------------  8
J  100.0% (36/36)   IGHJ5*02     16   ------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_192498

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           360     1e-101
IGHD1-26*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTACAAAC	TGGGAGCCACT	CGAGGTCCGTG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATTACAAACTGGGAGCCACTCGAGGTCCGTGTGACTCC	AKDYKLGATRGPCDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7493   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-30*18  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  N  N  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7493   91   AGTGGGTGGCAGTTATTTCATATGATGGAAATAATAAATACTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCG  180
V  96.0% (240/250)  IGHV3-30*18  137  ................A.............G..............C...........................................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  S  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  Y  K  L  G  A  T  
                    Query_7493   181  AGAGTACCCTGTATCTGCAAATGAACAGCCTGAGAGCTGACGACACGGCTGTGTATTACTGTGCGAAAGATTACAAACTGGGAGCCACTC  270
V  96.0% (240/250)  IGHV3-30*18  227  ...AC..G................................G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.9% (10/11)    IGHD1-26*01  8    ------------------------------------------------------------------------------.......T...-  18

                                      ---------------->                                  
                                      R  G  P  C  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7493   271  GAGGTCCGTGTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.6% (40/41)    IGHJ4*02     8    ----------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_236869

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            382     4e-108
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAC	GGCCCG	AGTGGTTATTACT	CGTC	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACGGCCCGAGTGGTTATTACTCGTCCTTCGACTAC	AHGPSGYYSSFDY	263	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	104	10	0	91.2
CDR3-IMGT (germline)	263	268	6	6	0	0	100
Total	N/A	N/A	268	256	12	0	95.5


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  T  G  V  D  V  G  W  I  R
                    Query_7494   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTACTGGAGTGGATGTGGGCTGGATCCG  90
V  95.5% (256/268)  IGHV2-5*01   30   .................................................................G........G...............  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  S  Y  S  P  S  L  K  R  R  L  T
                    Query_7494   91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGAGTTATAGCCCATCTCTGAAGAGGAGGCTGAC  180
V  95.5% (256/268)  IGHV2-5*01   120  ..........................................................C.C..C.................C.....C..  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  T  K  G  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  A  D  T  A  T  Y  Y  C  A  H  G
                    Query_7494   181  CATCACCAAGGGCACCTCCAAAAACCAAGTGGTCCTGACAATGACCAACATGGACCCAGCGGACACAGCCACATATTACTGTGCACACGG  270
V  95.5% (256/268)  IGHV2-5*01   210  ...........A...............G........T....................T.T............................--  297
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                      -------CDR3-IMGT-------------->                                  
                                        P  S  G  Y  Y  S  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7494   271  CCCGAGTGGTTATTACTCGTCCTTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  335
D  100.0% (13/13)   IGHD3-22*01  17   ----.............------------------------------------------------  29
J  97.7% (43/44)    IGHJ4*02     5    ---------------------...T........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_236867

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           411     5e-117
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ2*01                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGA	TACTATGACAGTAGTGGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTC	ARDGYYDSSGYYYDL	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	75	72	72	0	0	100
CDR1-IMGT	76	99	24	18	6	0	75
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	296	8	7	1	0	87.5
Total	N/A	N/A	293	278	15	0	94.9


Alignments

                                      <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                       V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  S  Y  S  F  S  S 
                    Query_7495   4    GTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTAGTTACAGTTTTAGCAGT  93
V  94.9% (278/293)  IGHV1-18*04  4    ........................................................................G......CC....C...C  93
                                       V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S 

                                      -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                       H  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  D  Y  A 
                    Query_7495   94   CACGGTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGGTGGATCAGCGGTTACAATGGTAACACAGACTATGCA  183
V  94.9% (278/293)  IGHV1-18*04  94   T..................................A.................A..........C................A........  183
                                       Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A 

                                      --------------------------------------------FR3-IMGT--------------------------------------
                                       R  K  F  Q  G  R  V  T  M  T  A  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  T  S  D  D  T 
                    Query_7495   184  CGGAAGTTCCAGGGCAGAGTCACCATGACCGCAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGACATCTGACGACACG  273
V  94.9% (278/293)  IGHV1-18*04  184  .A....C.......................A.............................................G.............  273
                                       Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T 

                                      --------------><-----------------CDR3-IMGT----------------->                              
                                       A  V  Y  Y  C  A  R  D  G  Y  Y  D  S  S  G  Y  Y  Y  D  L  W  G  R  G  T  L  V  T  V  S 
                    Query_7495   274  GCCGTGTATTACTGTGCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTCTGGGGCCGGGGAACCCTGGTCACTGTCTCC  363
V  94.9% (278/293)  IGHV1-18*04  274  ..................A....-------------------------------------------------------------------  296
                                       A  V  Y  Y  C  A  R                                                                      
D  95.2% (20/21)    IGHD3-22*01  5    ---------------------------........T............------------------------------------------  25
J  91.3% (42/46)    IGHJ2*01     8    ------------------------------------------------....T...T...........T..C..................  49

                                          
                                       S  
                    Query_7495   364  TCAG  367
J  91.3% (42/46)    IGHJ2*01     50   ....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_236864

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           327     8e-92
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	GTGGAGC	TTGGGGG	GCCTAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTGGAGCTTGGGGGGCCTACGACTAC	GGAWGAYDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  A  M  A  W  L  R  Q  A  P  G  K  G  L  
                    Query_7496   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCACCTATGCCATGGCCTGGCTCCGCCAGGCTCCAGGGAAGGGGCTAC  90
V  93.0% (226/243)  IGHV3-23*01  47   ..........................................G..G..........AG....G.........................GG  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  D  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7496   91   AATGGGTCTCATCTATTAGTGATAGTGGAGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.0% (226/243)  IGHV3-23*01  137  .G.........G.........G......T.............................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      N  N  T  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  G  G  A  W  G  A  Y  D  Y  
                    Query_7496   181  ACAACACACTGTCTCTGCAAATGAATAGCCTGAGAGCCGAAGACACGGCCGTATATTATTGTGGTGGAGCTTGGGGGGCCTACGACTACT  270
V  93.0% (226/243)  IGHV3-23*01  227  .G.....G....A............C..............G.................C....---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (7/7)     IGHD3-16*01  16   ----------------------------------------------------------------------.......-------------  22
J  100.0% (38/38)   IGHJ4*02     9    -----------------------------------------------------------------------------------.......  15

                                                                     
                                      W  G  Q  G  T  L  V  T  V  S  S
                    Query_7496   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTC  301
J  100.0% (38/38)   IGHJ4*02     16   ...............................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_236862

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         350     8e-99
IGHD3-10*01                                                                                           43.0    2e-08
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTGG	CTATGGTTCGGGGAGTTATTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATCGTGGCTATGGTTCGGGGAGTTATTATTTTGACAAC	ARDRGYGSGSYYFDN	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  F  A  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_7497     4    CCCTGAGACTCTCCTTTGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  94.8% (237/250)  IGHV4-30-4*01  50   .....TCC...A...GCA........................................................................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  H  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_7497     94   TGGAGTGGATTGGGTACATCCATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCA  183
V  94.8% (237/250)  IGHV4-30-4*01  140  ....................T............G.................................T......................  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  A  Y  H  C  A  R  D  R  G  Y  G  S  G  
                    Query_7497     184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGCCTATCACTGTGCCAGAGATCGTGGCTATGGTTCGGGGA  273
V  94.8% (237/250)  IGHV4-30-4*01  230  ...................................................TG...T.............--------------------  299
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (22/22)   IGHD3-10*01    7    ----------------------------------------------------------------------------..............  20

                                        ---------------->                                  
                                        S  Y  Y  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7497     274  GTTATTATTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  324
D  100.0% (22/22)   IGHD3-10*01    21   ........-------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02       6    --------......T...............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_236863

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           347     7e-98
IGHD6-19*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	CCCCCCTCGGAAG	TAGCAGTGGCTG	CCCGATGGAGGGAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGACCCCCCTCGGAAGTAGCAGTGGCTGCCCGATGGAGGGAGTACTACACTATGGACGTC	ARPPSEVAVAARWREYYTMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  L  S  S  Y  W  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_7498   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCCTCAGCAGCTACTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-74*01  47   ....................................C.T....T............................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  R  I  N  S  D  G  S  T  T  T  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_7498   91   AGTGGCTCTCACGTATTAATAGTGATGGGAGTACCACAACCTACGCGGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (235/248)  IGHV3-74*01  137  T....G...........................G.....G.................A................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  P  S  E  V  A  V  
                    Query_7498   181  AGAACACTCTGTATCTTCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTATACTACTGTGCAAGACCCCCCTCGGAAGTAGCAGTGG  270
V  94.8% (235/248)  IGHV3-74*01  227  .......G........G...................................G..T............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD6-19*01  6    ---------------------------------------------------------------------------------.........  14

                                      DR3-IMGT-------------------------->                                 
                                      A  A  R  W  R  E  Y  Y  T  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_7498   271  CTGCCCGATGGAGGGAGTACTACACTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  338
D  100.0% (12/12)   IGHD6-19*01  15   ...-----------------------------------------------------------------  17
J  94.1% (48/51)    IGHJ6*02     12   -----------------......GG................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_236860

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           310     1e-86
IGHD4-17*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	GACTACG	TAGAGATGGCTTCGAGAACCAATATGGGAGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTACGTAGAGATGGCTTCGAGAACCAATATGGGAGATTTGACTAC	ARLRRDGFENQYGRFDY	237	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	236	114	101	7	6	88.6
CDR3-IMGT (germline)	237	240	4	4	0	0	100
Total	N/A	N/A	246	224	16	6	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7499   1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTGGATTCACCTTTAGTAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (224/246)  IGHV3-23*01  47   .....................C..C..................C..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  T  G  G  S  T  F  Y  A  A  S  V  K  G  R  Y  T  I  S  R  D  N  S  
                    Query_7499   91   AGTGGGTCTCAGGTATTAGCGGCACTGGTGGTAGTACATTCTACGCGGCCTCCGTGAAGGGCCGGTACACCATCTCCAGAGACAATTCCA  180
V  91.1% (224/246)  IGHV3-23*01  137  ............C......T..T.G.........C....A......A.A.................T.......................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K        V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  L  R  R  D  G  F  E  
                    Query_7499   181  A------GGTCTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAGACTACGTAGAGATGGCTTCGAGA  264
V  91.1% (224/246)  IGHV3-23*01  227  .GAACAC.C.G.......................................G...............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD4-17*01  2    ------------------------------------------------------------------.......-----------------  8

                                      GT-------------------->                                  
                                      N  Q  Y  G  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7499   265  ACCAATATGGGAGATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_42509

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           452     3e-129
IGHD3-3*01                                                                                            41.1    8e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACGCCT	CGATTTTTGGAGTGGTTATTGTAC	GAGAATCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTAC	ARYASIFGVVIVRESFDY	289	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	74	0	0	100
CDR1-IMGT	76	99	24	24	0	0	100
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	114	0	0	100
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	291	2	0	99.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_7500   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  91
V  99.3% (291/293)  IGHV5-51*01  2    ..........................................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_7500   92   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACTAGATACA  181
V  99.3% (291/293)  IGHV5-51*01  92   ................................................................T.................C.......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_7500   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  99.3% (291/293)  IGHV5-51*01  182  ..........................................................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------------CDR3-IMGT--------------------->                   
                                      T  A  M  Y  Y  C  A  R  Y  A  S  I  F  G  V  V  I  V  R  E  S  F  D  Y  W  G  Q  G  T  L  
                    Query_7500   272  CCGCCATGTATTACTGTGCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTACTGGGGCCAGGGAACCCTGG  361
V  99.3% (291/293)  IGHV5-51*01  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  95.8% (23/24)    IGHD3-3*01   7    ------------------------------....................A...------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    --------------------------------------------------------------............................  33

                                                     
                                      V  T  V  S  S  
                    Query_7500   362  TCACCGTCTCCTCAG  376
J  100.0% (43/43)   IGHJ4*02     34   ...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_194008

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           315     5e-88
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TCACCGCGCGTTGA	CAGTGGCTGG	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATCACCGCGCGTTGACAGTGGCTGGAAACTACTACGGTATGGACGTC	AKDHRALTVAGNYYGMDV	264	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	149	45	19	5	21	42.2
FR3-IMGT	150	263	114	112	2	0	98.2
CDR3-IMGT (germline)	264	271	8	7	1	0	87.5
Total	N/A	N/A	271	238	12	21	87.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  F  T  F  S  S  Y  A  F  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7501   1    GGTCCCTGAGACTCTCCTGTGAAGGCTCTGGATTCACCTTTAGCAGCTATGCCTTCAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.8% (238/271)  IGHV3-23*01  47   .....................C..C............................A.G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----------------CDR2-IMGT-----------------><------------------------------
                                      E  W  V  S  A  I  G  S  R  V  S  P  I  G  N  G  D  G  R  A  Y  Y  A  D  S  V  K  G  R  F  
                    Query_7501   91   AGTGGGTCTCAGCTATTGGTAGTAGAGTCTCACCTATTGGTAATGGTGATGGTAGAGCATACTATGCAGACTCCGTGAAGGGCCGGTTCA  180
V  87.8% (238/271)  IGHV3-23*01  137  .................A..G....---------------------..G......CA.......C.........................  205
                                      E  W  V  S  A  I  S  G  S                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  
                    Query_7501   181  CCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGG  270
V  87.8% (238/271)  IGHV3-23*01  206  .........................................................................A..............A.  295
                                      T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  

                                      ----------------CDR3-IMGT--------------------->                                 
                                      D  H  R  A  L  T  V  A  G  N  Y  Y  G  M  D  V  W  G  P  G  T  T  V  T  V  S  S 
                    Query_7501   271  ATCACCGCGCGTTGACAGTGGCTGGAAACTACTACGGTATGGACGTCTGGGGCCCTGGGACCACGGTCACCGTCTCCTCA  350
V  87.8% (238/271)  IGHV3-23*01  296  .-------------------------------------------------------------------------------  296
                                                                                                                      
D  100.0% (10/10)   IGHD6-19*01  9    ---------------..........-------------------------------------------------------  18
J  96.2% (51/53)    IGHJ6*02     10   ---------------------------...........................AA........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_303412

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           288     4e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACTTTGACTTC	ARVSTSAYYFDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	214	30	0	87.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_7502   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGACAACCCCCAGGAAAGGGACTGGAG  90
V  87.7% (214/244)  IGHV4-59*01  49   .................................T........A.....T.C.........A....G..G........G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  S  F  D  T  S  K  R 
                    Query_7502   91   TGGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGTCCTTTGACACGTCCAAGAGG  180
V  87.7% (214/244)  IGHV4-59*01  139  .......GGT....C...........G.G..C...C................A..G............A..AG.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  Y  Y  F  D 
                    Query_7502   181  CAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATACTACTTTGAC  270
V  87.7% (214/244)  IGHV4-59*01  229  .............A....AGC..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-2*01   17   ---------------------------------------------------------------------......---------------  22
J  91.3% (42/46)    IGHJ4*02     1    -------------------------------------------------------------------------------...........  11

                                      -->                                
                                       F  W  G  R  G  T  L  V  V  V  S  S
                    Query_7502   271  TTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  305
J  91.3% (42/46)    IGHJ4*02     12   .A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_303413

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           374     7e-106
IGHD3-3*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	242	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7503   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (242/245)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_7503   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.8% (242/245)  IGHV4-34*01  139  .........................................................................T................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_7503   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  98.8% (242/245)  IGHV4-34*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7503   271  GCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_303414

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         371     6e-105
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTGG	CTATGGTTCGGGGAGTTATTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATCGTGGCTATGGTTCGGGGAGTTATTATTTTGACAAC	ARDRGYGSGSYYFDN	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_7504     1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCATCAGCAGTGGTGGTAGCTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  97.2% (244/251)  IGHV4-30-4*01  49   ..................A....C.........................A.TA.....................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7504     91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  97.2% (244/251)  IGHV4-30-4*01  139  ..................................G.......................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  G  Y  G  S  G 
                    Query_7504     181  AAGAACCAGTTCTCCCTGAAACTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGATCGTGGCTATGGTTCGGGG  270
V  97.2% (244/251)  IGHV4-30-4*01  229  ....................G..................................................-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01    7    -----------------------------------------------------------------------------.............  19

                                        ----------------->                                  
                                         S  Y  Y  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7504     271  AGTTATTATTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01    20   .........-------------------------------------------  28
J  97.7% (42/43)    IGHJ4*02       6    ---------......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_303415

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           411     5e-117
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTTGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTTGTCTGACTAC	ARCIGARPLSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	276	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  P  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_7505   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGCCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  95.5% (276/289)  IGHV5-51*03  6    ...........................................T..................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  S  L  G  W  M  G  I  I  Y  P  G  D  S  D  P  T  Y  S  P
                    Query_7505   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAAGCCTGGGGTGGATGGGAATCATCTATCCTGGTGACTCTGATCCCACATACAGTCC  180
V  95.5% (276/289)  IGHV5-51*03  96   ..................................G......A.........G........................A...G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  N  S  I  S  T  A  Y  R  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7505   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAACTCCATCAGCACCGCCTACCGGCAGTGGAGCAGCCTTAAGGCCTCGGACACCGC  270
V  95.5% (276/289)  IGHV5-51*03  186  ....................................G...................T...............G.................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  L  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7505   271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTTGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTGTCCTCAG  353
V  95.5% (276/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    ------------------------------------------.................................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_138809

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           391     6e-111
IGHD2-8*02                                                                                            12.2    34    
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	A	GTACTG	ACACC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAAGTACTGACACCGACTAT	AGSTDTDY	289	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	70	5	0	93.3
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	105	9	0	92.1
CDR3-IMGT (germline)	289	294	6	5	1	0	83.3
Total	N/A	N/A	294	272	22	0	92.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  D  S  L  K  I  S  C  K  G  S  G  Y  T  F  T 
                    Query_7506   1    GAGGTCCAGCTGGTACAGTCTGGGGCAGAGGTGAGAAAGCCGGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACC  90
V  92.5% (272/294)  IGHV5-51*03  1    .....G........G........A..........A............G..................................G.......  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  A  T  T  R  Y 
                    Query_7506   91   AACTACTGGATCGGCTGGGTGCGCCAGAGGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACGCTACTACCAGATAC  180
V  92.5% (272/294)  IGHV5-51*03  91   .G..........................T...............................A..............T..GA..........  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  S  F  E  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  S  Q  W  G  G  L  K  A  S  D 
                    Query_7506   181  AGCCCGTCGTTCGAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTCGCAGTGGGGCGGCCTGAAGGCCTCGGAC  270
V  92.5% (272/294)  IGHV5-51*03  181  ........C...C..............A................................CT.......A..A.................  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-------CDR3-IMGT------>                                  
                                       S  A  M  Y  Y  C  A  G  S  T  D  T  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_7506   271  AGCGCCATGTATTATTGTGCGGGAAGTACTGACACCGACTATTGGGGCCAGGGCACCCTGGTCATCGTCTCCTCAG  346
V  92.5% (272/294)  IGHV5-51*03  271  .C............C......A..----------------------------------------------------  294
                                       T  A  M  Y  Y  C  A  R                                                     
D  100.0% (6/6)     IGHD2-8*02   9    -------------------------......---------------------------------------------  14
J  92.5% (37/40)    IGHJ4*02     9    ------------------------------------.....C...........A..........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_303417

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         294     6e-82
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ5*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	GGAGTCGTAATTAT	CATGGGGATTTCTAC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGAGTCGTAATTATCATGGGGATTTCTACTTCGACCTC	ARGSRNYHGDFYFDL	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  D  S  V  Y  Y  S  L  N  W  I  R  Q  T  P  L  K  G 
                    Query_7507     1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCATCGACAGTGTTTACTACTCCTTAAACTGGATCCGGCAGACACCACTGAAGGGC  90
V  87.6% (219/250)  IGHV4-30-2*01  49   .......................C...............AG.....G.GGT.......GG.G.............C.....GG.......  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Q  H  S  G  A  T  Y  Y  N  P  S  L  E  S  R  A  S  L  S  V  D  R  S 
                    Query_7507     91   CTGGAGTGGATTGGCTACATCCAGCATTCTGGGGCCACCTACTACAACCCGTCCCTCGAGAGTCGGGCCTCCCTTTCAGTAGACCGGTCC  180
V  87.6% (219/250)  IGHV4-30-2*01  139  ..............G......T.T...AG....AG......................A.......A.T.A..A.A.........A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  S  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  R  N  Y  H  G 
                    Query_7507     181  AAGAGCCAGTTCTCCCTGAGGCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGAGGGAGTCGTAATTATCATGGG  270
V  87.6% (219/250)  IGHV4-30-2*01  229  ....A..............A.....G...........................G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  85.7% (12/14)    IGHD3-3*01     15   ----------------------------------------------------------------------.....G..T.....------  28

                                        ----------------->                                  
                                         D  F  Y  F  D  L  W  G  Q  G  I  L  V  S  L  S  S  
                    Query_7507     271  GATTTCTACTTCGACCTCTGGGGCCAGGGAATCCTGGTCTCCCTCTCCTCAG  322
J  90.7% (39/43)    IGHJ5*02       9    ---------.......C..............C.......A..G.........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_303418

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	AATCAC	GTATCACTATGATAATAATGGTTAT	AAG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATCACGTATCACTATGATAATAATGGTTATAAGTACTTTGACTAC	ARGITYHYDNNGYKYFDY	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	113	1	0	99.1
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E  
                    Query_7508   4    CCCTGAGACTCTCCTGTGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAAT  93
V  93.9% (229/244)  IGHV4-34*01  50   .....TCC...A....C......................................C...A............................G.  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  E  I  N  H  G  G  D  S  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_7508   94   GGCTTGGGGAAATCAATCATGGTGGAGACTCTAAGTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  93.9% (229/244)  IGHV4-34*01  140  ..A.................A.....AG.A.C..C.......................................................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  I  T  Y  H  Y  D  N  N  
                    Query_7508   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGAATCACGTATCACTATGATAATAATG  273
V  93.9% (229/244)  IGHV4-34*01  230  ................................................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  88.0% (22/25)    IGHD3-22*01  1    ----------------------------------------------------------------------....T.........G..G..  20

                                      ------------------->                                  
                                      G  Y  K  Y  F  D  Y  W  S  Q  G  T  L  V  T  V  S  S  
                    Query_7508   274  GTTATAAGTACTTTGACTACTGGAGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  88.0% (22/25)    IGHD3-22*01  21   .....-------------------------------------------------  25
J  97.8% (45/46)    IGHJ4*02     3    --------...............G..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_303419

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           375     3e-106
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  G  W  I  R  Q  H  P  G  K  G 
                    Query_7509   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGGGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.0% (245/250)  IGHV4-31*03  49   .................................................G..........A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_7509   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.0% (245/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_7509   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.0% (245/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7509   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_42503

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           344     6e-97
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGCG	GGCTGG	G	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCTGGGAACTGGTTCGACCCC	ARGRRAGNWFDP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_7510   1    ACCCTGTCCCTCACGTGCACTGTCTCTGGTGGCTCCATCAGTAGTGGGGCTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.0% (235/250)  IGHV4-31*03  49   ..............C..........................C.....T.G............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  E  S  T  Q  Y  N  P  S  L  K  S  R  L  T  I  S  G  D  T  S 
                    Query_7510   91   CTGGAGTGGATTGGATACATCTATTACGGTGAGAGCACCCAGTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGGAGACACGTCT  180
V  94.0% (235/250)  IGHV4-31*03  139  ..............G............A...G.......T.C........................G............T..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       T  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  W 
                    Query_7510   181  ACGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCTGGGAACTGG  270
V  94.0% (235/250)  IGHV4-31*03  229  .A.................A.................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------......-------  18
J  98.0% (48/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  T  S  
                    Query_7510   271  TTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCACCTCAG  313
J  98.0% (48/49)    IGHJ5*02     9    ....................................T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_42502

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           410     1e-116
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ2*01                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGA	TACTATGACAGTAGTGGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTC	ARDGYYDSSGYYYDL	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	108	6	0	94.7
CDR3-IMGT (germline)	292	299	8	7	1	0	87.5
Total	N/A	N/A	296	279	17	0	94.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  S  Y  R  F  S 
                    Query_7511   4    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTAGTTACAGGTTTAGC  93
V  94.3% (279/296)  IGHV1-18*04  1    ...G.T.....................................................................G......CC....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  H  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  D  Y 
                    Query_7511   94   AGCCACGGTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGGTGGATCAGCGGTTACAATGGTAACACAGACTAT  183
V  94.3% (279/296)  IGHV1-18*04  91   ...T..................................A.................A..........C................A.....  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  R  K  F  Q  G  R  V  T  M  T  A  D  T  S  T  S  T  A  Y  M  E  L  R  G  L  T  S  D  D 
                    Query_7511   184  GCACGGAAGTTCCAGGGCAGAGTCACCATGACCGCAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGGGCCTGACATCTGACGAC  273
V  94.3% (279/296)  IGHV1-18*04  181  ....A....C.......................A......................................A......G..........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  R  D  G  Y  Y  D  S  S  G  Y  Y  Y  D  L  W  G  R  G  T  L  V  T  V 
                    Query_7511   274  ACGGCCGTGTATTACTGTGCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTCTGGGGCCGGGGAACCCTGGTCACTGTC  363
V  94.3% (279/296)  IGHV1-18*04  271  .....................A....----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  95.2% (20/21)    IGHD3-22*01  5    ------------------------------........T............---------------------------------------  25
J  91.3% (42/46)    IGHJ2*01     8    ---------------------------------------------------....T...T...........T..C...............  46

                                             
                                       S  S  
                    Query_7511   364  TCCTCAG  370
J  91.3% (42/46)    IGHJ2*01     47   .......  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_138803

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           367     6e-104
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7512   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7512   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.2% (242/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_7512   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  97.2% (242/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_7512   271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_42504

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           336     1e-94
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGAGA	TCGGGGA	AG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGAGATCGGGGAAGACTACTTTAACTAC	ARAEIGEDYFNY	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  N  W  I  R  Q  L  P  G  K  G  
                    Query_7513   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAACTGGATCCGCCAGCTCCCAGGGAAGGGCC  93
V  93.2% (232/249)  IGHV4-31*03  50   .....TCC...A................................................G..............A..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  N  Y  Y  S  G  S  S  Y  F  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  
                    Query_7513   94   TGGAGTGGATTGGCTACAACTATTATAGTGGGAGCTCCTACTTCAACCCGTCCCTCAAAAGTCGAGTTACCATATCATTAGACACGTCTA  183
V  93.2% (232/249)  IGHV4-31*03  140  .............G....T......C.........A......A...............G..................G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  E  I  G  E  D  Y  
                    Query_7513   184  AGAACCAGTTCTCCCTGCAGCTCAGCTCTGTGACTGCCGCGGACTCGGCCGTTTATTACTGTGCGAGAGCCGAGATCGGGGAAGACTACT  273
V  93.2% (232/249)  IGHV4-31*03  230  .................A....G.....................A.......G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-10*01  14   ---------------------------------------------------------------------------.......--------  20
J  97.9% (47/48)    IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  N  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7513   274  TTAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.9% (47/48)    IGHJ4*02     7    ..G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_138801

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           400     9e-114
IGHD1-1*01                                                                                            10.3    134   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAACG	GGTCACCCCATATCGCGAC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACGGGTCACCCCATATCGCGACTTGGCTAC	ARGTGHPISRLGY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  A  T  Y
                    Query_7514   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCGCCACCTA  90
V  94.1% (273/290)  IGHV1-46*01  6    ..................G...............................................................A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  N  S  G  S  A  N  Y  A  Q
                    Query_7514   91   TTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGCCTTGAGTGGATGGGAATAATCAACCCTAATAGTGGTAGCGCAAATTACGCACA  180
V  94.1% (273/290)  IGHV1-46*01  96   C...................................G............................G.G........A...GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  T  T  V  Y  L  D  L  S  S  L  R  S  N  D  T  A
                    Query_7514   181  GAAATTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGACCACAGTCTACTTGGACCTGAGCAGCCTGAGATCTAACGACACGGC  270
V  94.1% (273/290)  IGHV1-46*01  186  ...G........................................G..........A....G..................G.G........  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  G  T  G  H  P  I  S  R  L  G  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_7514   271  CATGTATTACTGTGCGAGAGGAACGGGTCACCCCATATCGCGACTTGGCTACTGGGGCCAGGGGACCCTGGTCATCGTCTCCTCAG  356
V  94.1% (273/290)  IGHV1-46*01  276  .G..................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (5/5)     IGHD1-1*01   11   --------------------.....-------------------------------------------------------------  15
J  92.9% (39/42)    IGHJ4*02     7    --------------------------------------------...A...............A..........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_42506

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           425     3e-121
IGHD5-12*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GG	AGTGGCTACAATT	TAGTTACAC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAGTGGCTACAATTTAGTTACACACTTTGACTAT	ARGSGYNLVTHFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	281	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  P  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  I  F  R  S  Y
                    Query_7515   1    GCAGCTGGTGCAGTCTGGGCCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCATCTTCAGAAGTTA  90
V  96.9% (281/290)  IGHV1-69*01  6    ...................G.........................................................C......C..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  E  G  L  E  W  M  G  G  I  I  A  I  F  G  T  A  N  Y  A  Q
                    Query_7515   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGAGAAGGGCTTGAGTGGATGGGAGGGATCATCGCTATCTTTGGTACAGCAAACTACGCACA  180
V  96.9% (281/290)  IGHV1-69*01  96   ...............................C.............................C............................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_7515   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACCAGCACAGTTTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  96.9% (281/290)  IGHV1-69*01  186  ..........................................G.......CC......................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  G  S  G  Y  N  L  V  T  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7515   271  CGTGTATTACTGTGCGAGAGGGAGTGGCTACAATTTAGTTACACACTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  96.9% (281/290)  IGHV1-69*01  276  ....................---------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                       
D  92.3% (12/13)    IGHD5-12*01  9    ----------------------.........G...------------------------------------------------------  21
J  97.8% (44/45)    IGHJ4*02     4    --------------------------------------------..........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_312926

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD6-13*01                                                                                           14.1    10.0  
IGHJ4*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGCG	GCAACACCTGGTA	TCGAGATTCTCAGGCCGGCAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGCGGCAACACCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGAC	ARHSGNTWYRDSQAGIYFDD	290	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	73	1	0	98.6
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	103	11	0	90.4
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	279	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  F  G  
                    Query_7516   3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCCCTGAAGATCTCCTGTAAGGGTTCTGGATACAGATTTGGCG  92
V  94.6% (279/295)  IGHV5-51*01  2    .................................................T................................C...AC.A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      G  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_7516   93   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  182
V  94.6% (279/295)  IGHV5-51*01  92   ..........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  Q  G  Q  V  T  I  S  V  D  R  S  L  G  T  A  Y  L  Q  W  P  S  L  K  A  S  D  
                    Query_7516   183  ACCCGTCCTTTCAAGGACAGGTCACCATCTCAGTCGACAGGTCCCTCGGAACCGCCTACCTGCAGTGGCCCAGCCTGAAGGCCTCGGACA  272
V  94.6% (279/295)  IGHV5-51*01  182  G.........C.....C................C.....A....A..A.C..................AG....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------------CDR3-IMGT------------------------>             
                                      T  A  M  Y  Y  C  A  R  H  S  G  N  T  W  Y  R  D  S  Q  A  G  I  Y  F  D  D  W  G  Q  G  
                    Query_7516   273  CCGCCATGTACTACTGTGCGAGACACAGCGGCAACACCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGACTGGGGCCAGGGAA  362
V  94.6% (279/295)  IGHV5-51*01  272  ..........T..............-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  84.6% (11/13)    IGHD6-13*01  8    ------------------------------...G..G......-----------------------------------------------  20
J  95.7% (45/47)    IGHJ4*02     2    ----------------------------------------------------------------......T...T...............  27

                                                           
                                      T  L  V  T  V  S  S  
                    Query_7516   363  CCCTGGTCACCGTCTCCTCAG  383
J  95.7% (45/47)    IGHJ4*02     28   .....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_41442

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           329     3e-92
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_7517   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  S  L  K  P  R  V  T  I  S  L  D  T  P  K  N 
                    Query_7517   91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCTCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGCCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*08  139  ...A....G......T.......T..............................AG............A...G........T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G 
                    Query_7517   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGT  270
V  93.0% (227/244)  IGHV4-59*08  229  .............A......C..........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_7517   271  TATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  334
J  94.2% (49/52)    IGHJ1*01     1    ------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_10154

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           369     2e-104
IGHD4-4*01                                                                                            19.9    0.15  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCGGGCCCTT	CAGTAACTAC	AATCTTCACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCGGGCCCTTCAGTAACTACAATCTTCACCACTTTGACTAC	ATGPFSNYNLHHFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	241	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7518   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (241/246)  IGHV3-48*03  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  Y  G  G  T  I  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7518   91   AGTGGGTTTCATACATTAGTAGTTATGGTGGTACCATATACTACACAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.0% (241/246)  IGHV3-48*03  137  .......................AG....A..............G.............................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  G  P  F  S  N  Y  N  
                    Query_7518   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACAGCTGTTTATTACTGTGCGACCGGGCCCTTCAGTAACTACAATC  270
V  98.0% (241/246)  IGHV3-48*03  227  ..............................................G...................------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD4-4*01   7    ----------------------------------------------------------------------------..........----  16

                                      ---------------->                                  
                                      L  H  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7518   271  TTCACCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (45/45)   IGHJ4*02     4    ------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_244587

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           290     2e-80
IGHD4-17*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GTTGGGTCGGAAGA	TGACTACG	TCTCT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTTGGGTCGGAAGATGACTACGTCTCTCTGGTTCGACCCC	AKLGRKMTTSLWFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	216	31	0	87.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  E  F  A  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  R  G  L  
                    Query_7519   1    GGTCCCTGAGACTCTCCTGTGTTGCCTCTGAATTCGCCTTTGGCGACTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAGGGGACTGG  90
V  87.4% (216/247)  IGHV3-23*01  47   .....................CA.......G....A.....A..AG............C......................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  V  S  V  I  S  G  S  G  N  I  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7519   91   AATGTGTCTCAGTTATTAGTGGAAGTGGCAATATTACAACCTACGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAATTCGA  180
V  87.4% (216/247)  IGHV3-23*01  137  .G..G.......C.........T.....TGG..GC...TA........................G.......................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  K  Y  F  C  A  K  L  G  R  K  M  T  T  
                    Query_7519   181  GGAACACCTTGTATCTACAAATGAACAGCCTGCGAGCCGAGGACACGGCCAAATATTTCTGTGCGAAGTTGGGTCGGAAGATGACTACGT  270
V  87.4% (216/247)  IGHV3-23*01  227  A......GC.......G...............A.................GT.....A.........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD4-17*01  1    ---------------------------------------------------------------------------------........-  8

                                      ---------------->                                  
                                      S  L  W  F  D  P  R  G  Q  G  A  L  V  T  A  S  S  
                    Query_7519   271  CTCTCTGGTTCGACCCCCGGGGCCAGGGAGCCCTGGTCACTGCCTCCTCAG  321
J  91.5% (43/47)    IGHJ5*02     5    ----.............T...........A..........C.T........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_278487

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           402     3e-114
IGHD2-21*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	ATTTTGGTGG	ATAGAGATAGAGTTCC	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTC	ARGGFWWIEIEFRMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  Y 
                    Query_7520   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACCGACTAT  91
V  94.5% (273/289)  IGHV1-18*01  7    .............................................................................C......AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  W  I  S  A  Y  T  G  N  T  K  N  A  Q 
                    Query_7520   92   GGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGATGGATCAGCGCTTACACTGGTAATACAAAAAATGCACAA  181
V  94.5% (273/289)  IGHV1-18*01  97   .......G.....................................A.....................A......C.....CT.......G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  V  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_7520   182  AAAGTCCAGGGCAGAGTGACCATGACCACAGACACATCCACGAGAACAGCTTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.5% (273/289)  IGHV1-18*01  187  ..GC.............C..........................C.....C.........C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  G  G  F  W  W  I  E  I  E  F  R  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_7520   272  GTGTATTACTGTGCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  361
V  94.5% (273/289)  IGHV1-18*01  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD2-21*01  6    -----------------------...G......---------------------------------------------------------  15
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------.........................................  59

                                         
                                       S 
                    Query_7520   362  TCA  364
J  100.0% (44/44)   IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_278485

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         316     2e-88
IGHD3-3*01                                                                                            21.8    0.039
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGTGTCG	GGAGTGGTTCTTAT	CCGACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCAGGTGTCGGGAGTGGTTCTTATCCGACCTGACTAT	VRDQVSGVVLIRPDY	230	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	109	5	0	95.6
CDR3-IMGT (germline)	230	237	8	7	1	0	87.5
Total	N/A	N/A	224	213	11	0	95.1


Alignments

                                        <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                         S  G  F  T  F  S  H  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  A  I  S  Y  D 
                    Query_7521     14   TCTGGATTCACCTTCAGTCACTATGCAATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGCTATATCATATGAT  103
V  95.1% (213/224)  IGHV3-30-3*01  73   ..................AG......T.................................................T.............  162
                                         S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D 

                                        -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                         G  S  N  R  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  V  Q  M  N 
                    Query_7521     104  GGAAGCAATAGATACTACGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATGTGCAAATGAAC  193
V  95.1% (213/224)  IGHV3-30-3*01  163  ..........A........C..........................................................C...........  252
                                         G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                        -----------------------------------><-----------------CDR3-IMGT----------------->         
                                         S  L  R  A  E  D  T  A  I  Y  Y  C  V  R  D  Q  V  S  G  V  V  L  I  R  P  D  Y  W  G  Q 
                    Query_7521     194  AGCCTGAGAGCTGAGGACACGGCTATTTACTACTGTGTGAGAGATCAGGTGTCGGGAGTGGTTCTTATCCGACCTGACTATTGGGGCCAG  283
V  95.1% (213/224)  IGHV3-30-3*01  253  ........................G.G..T.......C......----------------------------------------------  296
                                         S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  92.9% (13/14)    IGHD3-3*01     15   ------------------------------------------------------.........A....----------------------  28
J  97.6% (40/41)    IGHJ4*02       8    --------------------------------------------------------------------------......C.........  23

                                                                 
                                         G  T  L  V  T  V  S  S  
                    Query_7521     284  GGAACCCTGGTCACCGTCTCCTCAG  308
J  97.6% (40/41)    IGHJ4*02       24   .........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_278482

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            352     3e-99
IGHD2-8*02                                                                                            14.1    8.8  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGTAGGCAGGAGCGTT	CTGGTGG	GAACTTCGCGAAGGGCATGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGTAGGCAGGAGCGTTCTGGTGGGAACTTCGCGAAGGGCATGGTACTTTGACAAC	ARGVGRSVLVGTSRRAWYFDN	241	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	236	11	0	95.5


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  T  N  H  N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_7522  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCAATCATAACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  90
V  95.5% (236/247)  IGHV4-4*02  49   ........................................G..G.AG.........................C.................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  S  G  S  S  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  K  S  K 
                    Query_7522  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCAGCAACTACAACCCGTCCCTCAAGAGTCGACTCACAATATCAGTGGACAAGTCCAAG  180
V  95.5% (236/247)  IGHV4-4*02  139  ..................................C............................G....C........A............  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------------------CDR
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  R  S  V  L  V 
                    Query_7522  181  AACCAGTTCTCCCTGAAACTGAGCTCCGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGAGTAGGCAGGAGCGTTCTGGTG  270
V  95.5% (236/247)  IGHV4-4*02  229  .................G........T........................................-----------------------  295
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD2-8*02  12   ------------------------------------------------------------------------------------......  17

                                     3-IMGT-------------------------->                                  
                                      G  T  S  R  R  A  W  Y  F  D  N  W  G  Q  G  A  Q  V  I  V  S  S  
                    Query_7522  271  GGAACTTCGCGAAGGGCATGGTACTTTGACAACTGGGGCCAGGGAGCCCAGGTCATCGTCTCCTCAG  337
D  100.0% (7/7)     IGHD2-8*02  18   .------------------------------------------------------------------  18
J  91.3% (42/46)    IGHJ4*02    3    ---------------------.........T..............A...T.....C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_278480

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            352     3e-99
IGHD1-26*01                                                                                           12.2    36   
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	N/A	GGGAGC	CGACATAGCACAAATGGAGCATTGACAGGGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGGAGCCGACATAGCACAAATGGAGCATTGACAGGGAATGCTTTTCATATC	AGSRHSTNGALTGNAFHI	273	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	80	30	29	1	0	96.7
FR2-IMGT	81	131	51	47	4	0	92.2
CDR2-IMGT	132	158	27	22	5	0	81.5
FR3-IMGT	159	272	114	101	13	0	88.6
CDR3-IMGT (germline)	273	275	3	3	0	0	100
Total	N/A	N/A	275	250	25	0	90.9


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  V  V  S  G  D  S  V  S  S  N  S  A  A  W  G  W  
                    Query_7523   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGTCGTCTCCGGGGACAGTGTCTCTAGCAACAGCGCTGCTTGGGGCTGGA  90
V  90.9% (250/275)  IGHV6-1*01   26   ..........................................C.A............................T.........AA.....  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  A  R  T  Y  Y  T  S  Q  W  I  H  D  Y  E  D  S  V  K  
                    Query_7523   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGCTAGGACATACTACACGTCCCAGTGGATTCATGATTATGAAGATTCTGTGAAAA  180
V  90.9% (250/275)  IGHV6-1*01   116  ....................................GA.............G....A.....TA.A.........C..TA..........  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  N  V  N  A  D  T  S  K  N  Q  I  S  L  Q  L  T  S  V  T  P  E  D  T  A  M  Y  F  
                    Query_7523   181  GTCGAATAAATGTCAACGCAGACACATCCAAGAACCAGATCTCCCTGCAGTTGACCTCTGTGACTCCCGAGGACACGGCTATGTACTTCT  270
V  90.9% (250/275)  IGHV6-1*01   206  .........CCA.....C....................T...........C...A.........................G....T.A..  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------------------CDR3-IMGT--------------------->                                  
                                      C  A  G  S  R  H  S  T  N  G  A  L  T  G  N  A  F  H  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7523   271  GTGCAGGGAGCCGACATAGCACAAATGGAGCATTGACAGGGAATGCTTTTCATATCTGGGGCCAAGGGACAATGGTCACCGTGTCTTCAG  360
V  90.9% (250/275)  IGHV6-1*01   296  .....-------------------------------------------------------------------------------------  300
                                      C  A                                                                                      
D  100.0% (6/6)     IGHD1-26*01  9    -----......-------------------------------------------------------------------------------  14
J  95.8% (46/48)    IGHJ3*02     3    ------------------------------------------........G...............................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_278481

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           364     5e-103
IGHD3-9*01                                                                                            14.1    8.4   
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-9*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCTACG	TTTTGGCTGG	GAGAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTACGTTTTGGCTGGGAGAATGATGCACTTGATATC	ARHLRFGWENDALDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	242	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_7524   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.4% (242/251)  IGHV4-39*01  49   .........................................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  N  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S 
                    Query_7524   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAACACCTACGACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCCGCTGACACGTCC  180
V  96.4% (242/251)  IGHV4-39*01  139  ..................................G.......T...............................A....TA.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  R  F  G  W  E 
                    Query_7524   181  AAGAATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGACATCTACGTTTTGGCTGGGAG  270
V  96.4% (242/251)  IGHV4-39*01  229  .....C.............A.......................................C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-9*01   12   -----------------------------------------------------------------------------.....A....---  21

                                      ----------------->                                  
                                       N  D  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7524   271  AATGATGCACTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  96.0% (48/50)    IGHJ3*02     1    --......TT..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_312922

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           332     3e-93
IGHD2-21*02                                                                                           14.1    8.0  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTTCA	GGTGACT	CTG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTTCAGGTGACTCTGGACTAC	AKDLQVTLDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7525   1    GGTCCCTGAGACTCTCCTGTGCAGCATCTGGATTCACCTTCAGTAGTTATGCCATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-30*04  47   .........................C....................C.....T..........................C..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  E  K  Y  H  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_7525   91   AATGGGTGGCAGTTATATCATATGATGGAAGTGAGAAATATCACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  92.4% (231/250)  IGHV3-30*04  137  .G..............................A.T.....CT...............A...........................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  G  G  D  T  A  I  Y  Y  C  A  K  D  L  Q  V  T  L  D  
                    Query_7525   181  AGAACACGCTGTACTTGCAAATGAACAGCCTTAGAGGTGGGGACACGGCTATATATTACTGTGCGAAAGATCTTCAGGTGACTCTGGACT  270
V  92.4% (231/250)  IGHV3-30*04  227  .............TC................G....C..A..........G.G.............G...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-21*02  14   ----------------------------------------------------------------------------.......-------  20
J  97.5% (39/40)    IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                  
                                      Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_7525   271  ACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  306
J  97.5% (39/40)    IGHJ4*02     13   ..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_212386

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           25.7    0.003
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGC	AGTAGTGGTTATT	GG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTCGACCCC	ARGGSSGYWWFDP	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_7526   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCATCAGTGGTTATTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.8% (228/243)  IGHV4-59*01  50   .....TCC...A....C.............G..........A....C.......G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  F  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  K  N  
                    Query_7526   94   GGATTGGGTTTATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGGGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  93.8% (228/243)  IGHV4-59*01  140  .........A.........C.................................A....................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  S  S  G  Y  W  W  F  
                    Query_7526   184  AGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTCG  273
V  93.8% (228/243)  IGHV4-59*01  230  ..............C...G.................................C..........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (13/13)   IGHD3-22*01  14   --------------------------------------------------------------------.............---------  26
J  93.5% (43/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  A  I  P  V  T  V  S  S  
                    Query_7526   274  ACCCCTGGGGCCAGGCAATCCCGGTCACCGTCTCCTCAG  312
J  93.5% (43/46)    IGHJ5*02     13   ...............G..C..T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_278489

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           353     1e-99
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCTACGAGGCGAGTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATATCTACGAGGCGAGTCATCAATATAGTGGCTACATGATTAATGACTAC	GKDIYEASHQYSGYMINDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7527   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGATATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-23*01  47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  G  I  S  E  S  G  G  S  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7527   91   ATTGGGTCTCAGGTATTAGTGAAAGTGGTGGTAGCACAAACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  95.2% (238/250)  IGHV3-23*01  137  .G..........C........GT...............T...............................................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  I  S  L  R  A  E  D  T  A  V  Y  Y  C  G  K  D  I  Y  E  A  S  H  
                    Query_7527   181  AGAACACCCTGTATCTACAAATGATCAGCCTCAGAGCCGAGGACACGGCCGTATATTACTGTGGGAAAGATATCTACGAGGCGAGTCATC  270
V  95.2% (238/250)  IGHV3-23*01  227  .......G........G.......A......G...............................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_7527   271  AATATAGTGGCTACATGATTAATGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  97.6% (40/41)    IGHJ4*02     8    ----------------------.............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_119477

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         347     7e-98
IGHD1-20*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCTGGGTTATTG	GGTATAA	GGGATT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCTGGGTTATTGGGTATAAGGGATTCTTTGACTCC	ARDPWVIGYKGFFDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7528     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-30-3*01  47   ..............................................C...........................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  D  G  N  Y  K  Y  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_7528     91   AGTGGGTGGCAGTTATATCATATGATGGAAACTACAAATATTACGCGGACTCCGTGAAGGGCCGTCTCACCATCTCCAGAGACAATTCCG  180
V  94.4% (236/250)  IGHV3-30-3*01  137  ..............................G.A.T.....C.....A.................AT.......................A  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        E  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  P  W  V  I  G  Y  
                    Query_7528     181  AGAACACTCTCTATCTGCAAATGAACAGCCTCAGAGTTGAGGACACGGCTGTGTACTACTGTGCGAGAGATCCCTGGGTTATTGGGTATA  270
V  94.4% (236/250)  IGHV3-30-3*01  227  .......G..G....................G....C..................T..............--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-20*01    1    ------------------------------------------------------------------------------------......  6

                                        ---------------->                                  
                                        K  G  F  F  D  S  W  G  L  G  T  L  V  T  V  S  S  
                    Query_7528     271  AGGGATTCTTTGACTCCTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (7/7)     IGHD1-20*01    7    .--------------------------------------------------  7
J  95.5% (42/44)    IGHJ4*02       5    -------........A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_119476

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           349     2e-98
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	AATCAC	GTATCACTATGATAATAATGGTTAT	AAG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATCACGTATCACTATGATAATAATGGTTATAAGTACTTTGACTAC	ARGITYHYDNNGYKYFDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_7529   1    ACCCTGTCCCTCACCTGTGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAA  90
V  95.5% (234/245)  IGHV4-34*01  49   .................C......................................C...A............................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  I  N  H  G  G  D  S  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7529   91   TGGCTTGGGGAAATCAATCATGGTGGAGACTCTAAGTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-34*01  139  ...A.................A.....AG.A.C..C......................................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  I  T  Y  H  Y  D  N  N 
                    Query_7529   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGAATCACGTATCACTATGATAATAAT  270
V  95.5% (234/245)  IGHV4-34*01  229  .................................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  88.0% (22/25)    IGHD3-22*01  1    -----------------------------------------------------------------------....T.........G..G.  19

                                      -------------------->                                  
                                       G  Y  K  Y  F  D  Y  W  S  Q  G  T  L  V  T  V  S  S  
                    Query_7529   271  GGTTATAAGTACTTTGACTACTGGAGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  88.0% (22/25)    IGHD3-22*01  20   ......-------------------------------------------------  25
J  97.8% (45/46)    IGHJ4*02     3    ---------...............G..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_119475

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           330     1e-92
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACATG	ATTACCATGAT	TCCA	GATTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGAGATAACATGATTACCATGATTCCAGATTCTTTTGATATC	SRDNMITMIPDSFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	231	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  S  P  I  N  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  A 
                    Query_7530   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTAGCCCCATCAACAGTGGAGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGCG  90
V  92.0% (231/251)  IGHV4-31*03  49   ..............................G..T......G......T........................................GC  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  F  G  Y  I  Y  D  S  G  G  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_7530   91   CTGGAGTGGTTTGGATACATCTATGACAGTGGGGGCACCTCCTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCACTAGACACGTCT  180
V  92.0% (231/251)  IGHV4-31*03  139  .........A....G.........T........A......A...........................T.........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  Q  F  S  L  K  L  S  S  A  T  V  A  D  P  A  V  Y  Y  C  S  R  D  N  M  I  T  M  I 
                    Query_7530   181  AGGAACCAGTTCTCCCTGAAGTTGAGCTCTGCGACTGTCGCGGACCCGGCCGTATATTACTGTTCGAGAGATAACATGATTACCATGATT  270
V  92.0% (231/251)  IGHV4-31*03  229  .A...................C.........T.....C.......A.......G.........G.......-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD3-22*01  3    ------------------------------------------------------------------------------.....T.....-  13

                                      ----------------->                              
                                       P  D  S  F  D  I  W  G  P  G  T  M  V  T  V  S 
                    Query_7530   271  CCAGATTCTTTTGATATCTGGGGCCCAGGGACAATGGTCACCGTCTCT  318
J  95.6% (43/45)    IGHJ3*02     2    ---...G..................A......................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_119474

Length=316
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           335     4e-94
IGHD3-16*01                                                                                           14.1    7.7  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCC	GTATTAT	CGC	ATCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCCCGTATTATCGCATC	TRGPYYRI	237	260	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	110	4	0	96.5
CDR3-IMGT (germline)	237	243	7	6	1	0	85.7
Total	N/A	N/A	232	223	9	0	96.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 
                    Query_7531   12   TGTGCAGCCTCTGGATTCACCTTCAGTAACTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAATGGGTTTCATACATT  101
V  96.1% (223/232)  IGHV3-48*03  64   ............................GT............................................G...............  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  S  G  S  P  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_7531   102  AGTAGTAGTGGTAGTCCCATATATTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTG  191
V  96.1% (223/232)  IGHV3-48*03  154  ...............A.......C..................................................................  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------CDR3-IMGT------>                     
                                       Q  T  N  S  L  R  A  E  D  T  A  D  Y  Y  C  T  R  G  P  Y  Y  R  I  W  G  Q  G  T  M  V 
                    Query_7531   192  CAAACTAACAGCCTGAGAGCCGAGGACACGGCTGATTATTACTGTACGAGAGGCCCGTATTATCGCATCTGGGGCCAAGGGACAATGGTC  281
V  96.1% (223/232)  IGHV3-48*03  244  ....TG............................T..........G......--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (7/7)     IGHD3-16*01  1    --------------------------------------------------------.......---------------------------  7
J  100.0% (36/36)   IGHJ3*02     14   ------------------------------------------------------------------........................  37

                                                  
                                       T  V  S  S 
                    Query_7531   282  ACCGTCTCTTCA  293
J  100.0% (36/36)   IGHJ3*02     38   ............  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30515799


Query= Query_119473

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           403     1e-114
IGHD4-17*01                                                                                           18.0    0.68  
IGHJ6*01                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAG	CTACGGTGA	GTCCGAGTACTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTC	ARDLATVSPSTFYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  T  S  Y 
                    Query_7532   2    CAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCTTCTGGTTACACCTTTACCAGTTAC  91
V  94.5% (274/290)  IGHV1-18*04  7    ....................T..........................................G......................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_7532   92   GGTATCACTTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  181
V  94.5% (274/290)  IGHV1-18*04  97   .......GC........A..............A................................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  S  D  D  T  A 
                    Query_7532   182  ATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.5% (274/290)  IGHV1-18*04  187  .A.C...A..G.................C....................C..........C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  T  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_7532   272  GTGTATTACTGTGCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTCTGGGGTCAAGGGACCACGGTCACC  361
V  94.5% (274/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------.........--------------------------------------------------------  12
J  98.1% (52/53)    IGHJ6*01     11   -----------------------------------------------........................G..................  53

                                                
                                       V  S  S  
                    Query_7532   362  GTCTCCTCAG  371
J  98.1% (52/53)    IGHJ6*01     54   ..........  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_31193

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           307     1e-85
IGHD4-4*01                                                                                            18.0    0.61 
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-4*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGATACC	ACAGTAACT	GCAGATATC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCGATACCACAGTAACTGCAGATATCACTACAACTACCACGGCATGGACGTC	AKDRYHSNCRYHYNYHGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7533   1    GGTCCCTGAGACTCTCCTGTACAGCCTCCGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  89.2% (223/250)  IGHV3-30*18  47   ....................G.......T.................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  L  A  V  I  S  D  D  G  F  N  Y  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  L  
                    Query_7533   91   AGTCACTGGCAGTTATTTCAGATGACGGATTCAACTACCATTATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTTAC  180
V  89.2% (223/250)  IGHV3-30*18  137  ...GGG..........A...T....T...AGT..TA.AT.C..............................A...............CCA  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      Q  K  T  L  Y  L  Q  M  N  G  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  R  Y  H  S  N  C  
                    Query_7533   181  AGAAGACGCTGTATCTGCAAATGAATGGCCTGAGACCTGAGGACACGGCAGTATATTACTGTGCGAAAGACCGATACCACAGTAACTGCA  270
V  89.2% (223/250)  IGHV3-30*18  227  ....C....................CA........G.............T..G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD4-4*01   6    ------------------------------------------------------------------------------.........---  14

                                      R3-IMGT------------------------>                              
                                      R  Y  H  Y  N  Y  H  G  M  D  V  W  G  Q  G  T  T  V  I  V  S 
                    Query_7533   271  GATATCACTACAACTACCACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCC  332
J  92.9% (52/56)    IGHJ6*02     4    ------.....T.....T....T...............................C.......  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_119471

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           441     6e-126
IGHD3-10*01                                                                                           18.0    0.68  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGCCC	GTTCGGGGA	CTTTCCCAAAAAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGCCCGTTCGGGGACTTTCCCAAAAAAACTTTGACTAC	ARDLPVRGLSQKNFDY	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	24	0	0	100
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	110	4	0	96.5
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	289	7	0	97.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_7534   4    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  93
V  97.6% (289/296)  IGHV1-18*01  1    ...G.T....................................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 
                    Query_7534   94   AGCTATGGTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTAT  183
V  97.6% (289/296)  IGHV1-18*01  91   .........A................................................................................  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  A  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_7534   184  GCACAGAAACTCCAGGGCAGAGTCACCATGACCACAGACACTTCCGCGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCGGACGAC  273
V  97.6% (289/296)  IGHV1-18*01  181  ........G................................A...A.....................................T......  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  D  L  P  V  R  G  L  S  Q  K  N  F  D  Y  W  G  Q  G  T  L  V  T 
                    Query_7534   274  ACGGCCGTGTATTACTGTGCGAGAGATCTGCCCGTTCGGGGACTTTCCCAAAAAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACC  363
V  97.6% (289/296)  IGHV1-18*01  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (9/9)     IGHD3-10*01  12   ---------------------------------.........------------------------------------------------  20
J  100.0% (45/45)   IGHJ4*02     4    -------------------------------------------------------...................................  38

                                                
                                       V  S  S  
                    Query_7534   364  GTCTCCTCAG  373
J  100.0% (45/45)   IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_119470

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           344     6e-97
IGHD3-22*01                                                                                           21.8    0.041
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GTATTACTTTGAGAATAGTG	CCAGCACGTTCGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTATTACTTTGAGAATAGTGCCAGCACGTTCGGTGCTTTTGATATC	ARYYFENSASTFGAFDI	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  N  S  Y  Y  W  S  *  I  R  Q  P  P  G  K  G  L  E 
                    Query_7535   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGAATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*08  49   ...................C....................G..................G..............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  N  G  S  T  N  Y  N  P  S  L  K  S  R  L  I  I  S  V  D  T  S  K  N 
                    Query_7535   91   TGGATTGGCTATATCCATTACAATGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGACTCATCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (231/242)  IGHV4-59*08  139  ........G......T......G.....................................G...C.........................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  Y  Y  F  E  N  S  A  S  T 
                    Query_7535   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCCTATATTACTGTGCGAGGTATTACTTTGAGAATAGTGCCAGCACG  270
V  95.5% (231/242)  IGHV4-59*08  229  ...................G.........................G.G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  85.0% (17/20)    IGHD3-22*01  1    --------------------------------------------------------------........A...T.G.....--------  20

                                      ----------------->                                  
                                       F  G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7535   271  TTCGGTGCTTTTGATATCTGGGGCCAAGGCACAATGGTCACCGTCTCTTCAG  322
J  97.9% (46/47)    IGHJ3*02     4    -----........................G......................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_14290

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD1-1*01                                                                                            10.3    119  
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCCGAGGGTAAA	AACGA	N/A	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCCGAGGGTAAAAACGAACTATTCCGGGATGGCCGTC	ARGPRVKTNYSGMAV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	226	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  D  G  S  I  S  T  N  F  W  S  W  I  R  Q  P  P  G  K  G  L  D 
                    Query_7536   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGATGGCTCCATCAGCACTAACTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAC  90
V  93.4% (226/242)  IGHV4-59*01  49   ..................A.........G............T.G.T...A.......................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  S  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7536   91   TGGATTGGGTATATCTCTTCCAGTGGAAATACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAT  180
V  93.4% (226/242)  IGHV4-59*01  139  ................A..A......G.GC...........................................................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  V  K  T  N  Y  S 
                    Query_7536   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTATTGTGCGAGGGGCCCGAGGGTAAAAACGAACTATTCC  270
V  93.4% (226/242)  IGHV4-59*01  229  .............A.................................G.....C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-1*01   12   -----------------------------------------------------------------------------.....--------  16
J  88.7% (47/53)    IGHJ6*02     10   ----------------------------------------------------------------------------------....C.A.  17

                                      ----------->                                 
                                       G  M  A  V  W  G  L  G  T  T  V  P  V  S  S 
                    Query_7536   271  GGGATGGCCGTCTGGGGCCTAGGGACCACGGTCCCCGTCTCCTCA  315
J  88.7% (47/53)    IGHJ6*02     18   ..T....A...........A.............A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_119479

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           346     2e-97
IGHD3-10*02                                                                                           12.2    35   
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-10*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCAAGCAGTCGGGATTGTTTAAGTAATAGTTGCCATACAGAATCAGATCTT	TATGTT	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCAAGCAGTCGGGATTGTTTAAGTAATAGTTGCCATACAGAATCAGATCTTTATGTTAACTACGGCTTGGACGTC	ASSSRDCLSNSCHTESDLYVNYGLDV	246	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	248	3	3	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_7537   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  95.1% (233/245)  IGHV4-31*02  50   .....TCC...A..............................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  S  P  S  L  K  S  R  S  I  I  S  I  D  T  S  
                    Query_7537   94   TGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAGCCCGTCCCTCAAGAGTCGAAGTATCATATCAATAGACACGTCGA  183
V  95.1% (233/245)  IGHV4-31*02  140  .............................................A...................GT..C.......G..........T.  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  G  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  S  S  R  D  C  L  S  
                    Query_7537   184  AGGGCCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGTCAAGCAGTCGGGATTGTTTAAGTA  273
V  95.1% (233/245)  IGHV4-31*02  230  ..AA.............................................................-------------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          

                                      -------CDR3-IMGT--------------------------------->                                 
                                      N  S  C  H  T  E  S  D  L  Y  V  N  Y  G  L  D  V  W  G  Q  G  T  T  V  A  F  S  S 
                    Query_7537   274  ATAGTTGCCATACAGAATCAGATCTTTATGTTAACTACGGCTTGGACGTCTGGGGCCAGGGGACCACGGTCGCCTTCTCCTCA  356
D  100.0% (6/6)     IGHD3-10*02  8    --------------------------......---------------------------------------------------  13
J  90.0% (45/50)    IGHJ6*02     13   ---------------------------------.......TA................A............A..G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_119478

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           12.2    30   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGACGGGT	TGGCTG	CCC	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGACGGGTTGGCTGCCCGACGAC	ARGTGWLPDD	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  Y  C  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7538   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTACTACTGCAACTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  93.9% (229/244)  IGHV4-59*01  49   ...............................G..........A..........G.G..................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  N  T  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7538   91   TGGATTGGACATATCTACAACACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  93.9% (229/244)  IGHV4-59*01  139  ........GT.......TT...G.....G.............................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  T  G  W  L  P  D  D  W 
                    Query_7538   181  CAGTTCTCCTTGAACCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGACGGGTTGGCTGCCCGACGACTGG  270
V  93.9% (229/244)  IGHV4-59*01  229  .........C....G....G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  12   ------------------------------------------------------------------------......------------  17
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------...T.....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_7538   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.5% (39/40)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_56336

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           433     1e-123
IGHD2-8*02                                                                                            14.1    9.4   
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGT	TACTGGT	ACCAACGCCAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTC	ARLVTGTNATYGLDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  R  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_7539   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAGGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAGCTA  90
V  97.9% (283/289)  IGHV5-51*03  6    ................................A................................G........................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  R  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_7539   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGAGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  97.9% (283/289)  IGHV5-51*03  96   ........G..................................T..............................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7539   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (283/289)  IGHV5-51*03  186  ...................................A.........C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  L  V  T  G  T  N  A  T  Y  G  L  D  V  W  G  Q  G  S  K  V  T  V  S  S
                    Query_7539   271  CATGTATTACTGTGCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTCTGGGGCCAAGGGAGCAAGGTCACCGTCTCCTC  360
V  97.9% (283/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-8*02   10   ------------------------.......-----------------------------------------------------------  16
J  93.9% (46/49)    IGHJ6*02     14   ------------------------------------------.......A.....................C..C...............  61

                                       
                                       
                    Query_7539   361  A  361
J  93.9% (46/49)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_56335

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     8e-121
IGHD1-26*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	GGG	GGTCTAGTGGAAGGTACTAC	CTCCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTAC	ARGGLVEGTTSFFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	280	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_7540   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCAACCTA  90
V  96.9% (280/289)  IGHV5-51*03  6    ..................................................................................A.C.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  F  G  W  V  R  Q  I  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_7540   91   CTGGTTCGGCTGGGTGCGCCAGATACCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.9% (280/289)  IGHV5-51*03  96   ....A...................G..........................G......................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7540   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (280/289)  IGHV5-51*03  186  ............................................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  A  R  G  G  L  V  E  G  T  T  S  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7540   271  CATTTATTACTGTGCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCGTC  360
V  96.9% (280/289)  IGHV5-51*03  276  ...G............A..-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  85.0% (17/20)    IGHD1-26*01  1    ----------------------...A......G..C......------------------------------------------------  20
J  97.7% (43/44)    IGHJ4*02     5    ------------------------------------------------.......................................C..  46

                                        
                                        
                    Query_7540   361  AG  362
J  97.7% (43/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_56334

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         380     1e-107
IGHD6-19*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCTTAAGGTCAATCGCGTC	CAGTGGCTGG	GCGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCA	ARHPLRSIASSGWAS	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	77	72	65	7	0	90.3
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	102	12	0	89.5
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  T  L  T  N 
                    Query_7541     6    GTCCAGCTTGTGCAGTCTGGAGGAGAGGTGAAGAAGCCCGGGGAGTCTTTGAGGATTTCCTGTAAGGCTTCTGGATACACCCTTACCAAC  95
V  91.8% (267/291)  IGHV5-10-1*01  4    ..G.....G.............C.........A...............C.......C..........G...........G.T......G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  W  I  S  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  S  Y  S 
                    Query_7541     96   TACTGGATCAGCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGACCCTAGTGACTCTTATACCAGCTACAGT  185
V  91.8% (267/291)  IGHV5-10-1*01  94   ........................A.....................................T...................A......C  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  D  G  N  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  M  A  S  D  P 
                    Query_7541     186  CCGTCCTTCGACGGCAACGTCACCATCTCAGTTGACAAGTCCATCAGTACTGCCTATTTGCAGTGGAGCAGCCTGATGGCCTCGGACCCC  275
V  91.8% (267/291)  IGHV5-10-1*01  184  .........C.A...C...............C...............C........CC..................A..........A..  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><-----------------CDR3-IMGT----------------->                              
                                         A  M  Y  Y  C  A  R  H  P  L  R  S  I  A  S  S  G  W  A  S  W  G  Q  G  T  L  V  T  V  S 
                    Query_7541     276  GCCATGTATTATTGTGCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCATGGGGCCAGGGAACCCTGGTCACCGTCTCC  365
V  91.8% (267/291)  IGHV5-10-1*01  274  ...........C.........---------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                      
D  100.0% (10/10)   IGHD6-19*01    9    --------------------------------------------..........------------------------------------  18
J  100.0% (34/34)   IGHJ4*02       15   ------------------------------------------------------------..............................  44

                                            
                                         S  
                    Query_7541     366  TCAG  369
J  100.0% (34/34)   IGHJ4*02       45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_56333

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7542   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7542   91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........GT........T.......G...............................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_7542   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.1% (233/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7542   271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_56332

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ2*01                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTACTATAATCCTAGTGGT	CTTTACGGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACTATAATCCTAGTGGTCTTTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGLYGYWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  N  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7543   1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAATAATTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ...........................G............G..G...C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  D  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7543   91   TGGATTGGGGACATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  .........T.T..............................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  L  Y 
                    Query_7543   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATTACTATAATCCTAGTGGTCTTTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.2% (16/19)    IGHD3-22*01  4    -----------------------------------------------------------------.......G..AG.......------  22

                                      -------------------->                                  
                                       G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_7543   271  GGGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  325
J  100.0% (52/52)   IGHJ2*01     2    ---....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_56331

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         311     4e-87
IGHD3-10*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CAAGGACGCCAG	TATGGTT	GGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGACAAGGACGCCAGTATGGTTGGGTGGTTCGACCCC	ARDKDASMVGWFDP	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	225	26	0	89.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  V  V  S  G  D  S  I  S  S  G  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  A 
                    Query_7544     1    ACCCTGTCCCTCACCTGCGTTGTGTCTGGTGACTCCATCAGCAGCGGTGGTTACTACTGGAGTTGGCTCCGCCAGCCCCCAGGGAAGGCC  90
V  89.6% (225/251)  IGHV4-30-4*01  49   ..................AC...C.......G............T....A................A.....................G.  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         P  E  W  I  G  Y  F  Y  Y  G  G  N  T  Y  Y  N  P  S  L  E  S  R  T  S  I  S  V  D  A  S 
                    Query_7544     91   CCGGAATGGATTGGGTACTTCTATTATGGTGGGAACACCTACTACAACCCGTCCCTCGAGAGTCGAACTTCCATATCAGTAGACGCGTCC  180
V  89.6% (225/251)  IGHV4-30-4*01  139  .T...G............A.......CA......G......................A........GT.A..............A.....  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  L  F  S  L  N  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  K  D  A  S  M  V 
                    Query_7544     181  AAGAACCTGTTCTCCCTGAACTTGACCTCTGTGACTGCCGCAGACACGGCCGTCTATTACTGCGCCAGGGACAAGGACGCCAGTATGGTT  270
V  89.6% (225/251)  IGHV4-30-4*01  229  .......A............GC...G...........................G........T.....A..-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-10*01    8    -----------------------------------------------------------------------------------.......  14

                                        -------------->                                  
                                         G  W  F  D  P  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_7544     271  GGGTGGTTCGACCCCTGGGGCCAGGGAATCCTCGTCACCGTCTCCTCAG  319
J  95.7% (44/46)    IGHJ5*02       6    ---.........................C...G................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_56339

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           366     2e-103
IGHD7-27*01                                                                                           12.2    29    
IGHJ1*01                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD7-27*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CC	CTGGGG	N/A	GCACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCTGGGGGCAC	ARPWGH	243	260	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_7545   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCGGTGACTATTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (241/248)  IGHV3-11*01  47   .........................................A.......C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  S  G  S  T  K  H  Y  A  D  S  V  K  G  R  F  T  I  S  G  D  N  A  
                    Query_7545   91   AGTGGGTTTCATACATTAGTACTAGTGGTAGTACCAAACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCGGGGACAACGCCA  180
V  97.2% (241/248)  IGHV3-11*01  137  .....................G..............T.T......................................A............  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----CDR3-IMGT--->          
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  W  G  H  W  G  Q  
                    Query_7545   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGACCCTGGGGGCACTGGGGCCAGG  270
V  97.2% (241/248)  IGHV3-11*01  227  ..........................................................C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD7-27*01  5    ----------------------------------------------------------------------......--------------  10
J  97.4% (37/38)    IGHJ1*01     15   ----------------------------------------------------------------------------..............  28

                                                              
                                      G  T  L  V  T  V  S  S  
                    Query_7545   271  GCACCCTGGTCACTGTCTCCTCAG  294
J  97.4% (37/38)    IGHJ1*01     29   .............C..........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_56338

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATTTAGAA	TACCAG	TTTTCACGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATTTAGAATACCAGTTTTCACGTACTACTTTGACTAC	AREFRIPVFTYYFDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  R  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7546   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGAAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...................C.....................T....A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  M  Y  Y  S  G  T  P  N  Y  N  P  S  L  E  S  R  L  T  I  S  L  D  T  S  K  N 
                    Query_7546   91   TGGGTTGGGTACATGTACTACAGTGGGACCCCCAACTATAACCCCTCCCTCGAGAGTCGACTCACCATATCACTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ...A.......T..C..T..........G.A.......C............A........G...........G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  F  R  I  P  V  F  T  Y 
                    Query_7546   181  CAGTTTTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGAATTTAGAATACCAGTTTTCACGTAC  270
V  93.5% (229/245)  IGHV4-59*01  229  .....C.........................................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-2*01   16   -------------------------------------------------------------------------......-----------  21
J  100.0% (46/46)   IGHJ4*02     1    ----------------------------------------------------------------------------------------..  2

                                      ----------->                                
                                       Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7546   271  TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
J  100.0% (46/46)   IGHJ4*02     3    ............................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_10156

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           338     4e-95
IGHD1-26*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TC	GTGGGAGCTACT	GGTCGGCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGTGGGAGCTACTGGTCGGCCTTTTGACTAC	ARVVGATGRPFDY	237	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	111	3	0	97.4
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	232	224	8	0	96.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  R  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 
                    Query_7547   12   TGTGCAGCCTCTGGATTCACCTTCAGGAATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAATGGGTTTCATACATT  101
V  96.6% (224/232)  IGHV3-48*03  64   ..........................T.G.............................................G...............  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  S  G  H  T  I  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  S  L 
                    Query_7547   102  AGTAGTAGTGGTCATACCATAGACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTCTCTG  191
V  96.6% (224/232)  IGHV3-48*03  154  ............AG.......T...............................................................A....  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><--------------CDR3-IMGT-------------->      
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  H  C  A  R  V  V  G  A  T  G  R  P  F  D  Y  W  G 
                    Query_7547   192  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATCACTGTGCGAGAGTCGTGGGAGCTACTGGTCGGCCTTTTGACTACTGGGGC  281
V  96.6% (224/232)  IGHV3-48*03  244  .......................................T............--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (12/12)   IGHD1-26*01  7    ------------------------------------------------------............------------------------  18
J  97.7% (42/43)    IGHJ4*02     6    ---------------------------------------------------------------------------...............  20

                                                                  
                                       Q  G  T  Q  V  T  V  S  S  
                    Query_7547   282  CAGGGAACCCAGGTCACCGTCTCCTCAG  309
J  97.7% (42/43)    IGHJ4*02     21   ..........T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_53679

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            341     5e-96
IGHD2-2*01                                                                                            12.2    32   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATC	TAGTAACACCTG	GCACTCGGGGTTTTGGT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTAGTAACACCTGGCACTCGGGGTTTTGGTTAC	AGHLVTPGTRGFGY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  T  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_7548  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCAGCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  94.3% (232/246)  IGHV4-4*01  49   ........................................G...T................................A........G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  G  G  N  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  S  N 
                    Query_7548  91   GAGTGGATTGGGGAAATCTATCATGGTGGAAACACCAACTACAACCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAC  180
V  94.3% (232/246)  IGHV4-4*01  139  ........................A....G.G......................A..................................G  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  R  L  N  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_7548  181  AACCAGTTCTCCCTGAGGCTGAACTCTCTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATCTAGTAACACCTGGCACTCGG  270
V  94.3% (232/246)  IGHV4-4*01  229  ................A.....G....G...........................G.......A..------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01  13   ----------------------------------------------------------------------.....C..G...--------  24

                                     ----------->                                  
                                      G  F  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7548  271  GGTTTTGGTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (37/37)   IGHJ4*02    12   ---------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_53678

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGGC	AGCAGCAGCTGG	ATAGGGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGCAGCAGCAGCTGGATAGGGGTTGACTCC	ARDQGSSSWIGVDS	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7549   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATAAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ...................C..................C....G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  R  N 
                    Query_7549   91   TGGATTGGATATATCTATTACAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAGGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ........G..........................C.................................................A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  G  S  S  S  W  I  G 
                    Query_7549   181  CAGTTCTCCCTGAAGCTGAGTTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGATCAGGGCAGCAGCAGCTGGATAGGG  270
V  96.7% (237/245)  IGHV4-59*01  229  ....................C................................C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD6-13*01  7    ------------------------------------------------------------------------............------  18

                                      -------->                                  
                                       V  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7549   271  GTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.6% (41/42)    IGHJ4*02     7    -......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_73357

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            382     4e-108
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTATTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7550   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_7550   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  98.8% (247/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  H  C  A  R  E  K  T  A  A  V  V  
                    Query_7550   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATCACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  98.8% (247/250)  IGHV3-7*01   227  ........................................................T.............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7550   271  TTGACTATTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  94.9% (56/59)    IGHJ6*02     4    ---....C..C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_73350

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           366     2e-103
IGHD4-17*01                                                                                           18.0    0.59  
IGHJ3*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-17*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AAA	GACTACATTGACTAC	GAATT	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGAAAAGACTACATTGACTACGAATTATGCTTTTGATGTC	AKEKTTLTTNYAFDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7551   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-30*18  47   .......................................................G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  E  N  Y  K  Y  Y  A  D  S  V  K  G  R  I  T  I  S  R  D  N  S  
                    Query_7551   91   AGTGGGTGGCAGTTATATCATATGATGAAAATTATAAGTACTATGCAGACTCCGTGAAGGGCCGAATCACCATCTCCAGAGACAATTCCA  180
V  96.8% (242/250)  IGHV3-30*18  137  ...........................G..G.A....A...........................T........................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  E  K  T  T  L  T  T  
                    Query_7551   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTATATTACTGTGCCAAAGAAAAGACTACATTGACTACGA  270
V  96.8% (242/250)  IGHV3-30*18  227  ....................................................G...........G.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  86.7% (13/15)    IGHD4-17*01  2    -------------------------------------------------------------------------......GG.......--  16

                                      ---------------->                                  
                                      N  Y  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7551   271  ATTATGCTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  100.0% (48/48)   IGHJ3*01     3    ---................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_73351

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           350     8e-99
IGHD3-16*01                                                                                           10.3    120  
IGHJ2*01                                                                                              102     4e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TGGGG	TGCCCACTTCAA	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGGGTGCCCACTTCAACTACTGGTACTTCGATCTC	ARWGAHFNYWYFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  A  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7552   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGCATTCACCCTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGG  90
V  95.2% (236/248)  IGHV3-30*03  47   ..............................G.......T..............................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  N  N  R  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7552   91   AGTGGGTGGCGGTTATATCATATGATGGAAATAATAGATACTATGCCGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (236/248)  IGHV3-30*03  137  ..........A...................G.....A.........A...........................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  L  Q  M  N  S  L  R  V  E  D  T  A  I  Y  Y  C  A  R  W  G  A  H  F  N  Y  
                    Query_7552   181  AGAACACGCTGTCTCTGCAAATGAACAGCCTGAGAGTTGAGGACACGGCCATCTATTACTGTGCGAGATGGGGTGCCCACTTCAACTACT  270
V  95.2% (236/248)  IGHV3-30*03  227  ............A.......................C............TG.G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-16*01  17   --------------------------------------------------------------------.....-----------------  21
J  100.0% (53/53)   IGHJ2*01     1    -------------------------------------------------------------------------------------.....  5

                                      ------------->                                  
                                      W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_7552   271  GGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  318
J  100.0% (53/53)   IGHJ2*01     6    ................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_73352

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD3-3*01                                                                                            35.3    4e-06
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTTAATCTCCCCTC	GTATTACGATTTTTGGAG	CGGAGGCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTTAATCTCCCCTCGTATTACGATTTTTGGAGCGGAGGCAACTACTACTACGGTTTGGACGCC	ARLNLPSYYDFWSGGNYYYGLDA	235	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	120	21	18	0	3	85.7
FR3-IMGT	121	234	114	107	7	0	93.9
CDR3-IMGT (germline)	235	239	5	5	0	0	100
Total	N/A	N/A	242	226	13	3	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  A  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7553   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCGCAAGTTACTACTGGAGCTGGATCCGGCAGCCCCCTGGAAAGGGACTGGAG  90
V  93.4% (226/242)  IGHV4-59*08  49   ...............................G.......AGT................................A..G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S     N  Y  N  P  S  L  K  S  R  L  T  M  S  L  D  T  S  K  N 
                    Query_7553   91   TGGATTGGGTATATCTATTACAGTGGGAG---CAACTACAACCCCTCCCTCAAGAGTCGACTCACCATGTCACTAGACACGTCCAAGAAC  177
V  93.4% (226/242)  IGHV4-59*08  139  .............................CAC............................G.......A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  F  S  L  N  L  T  S  V  T  A  A  D  S  A  M  Y  Y  C  A  R  L  N  L  P  S  Y  Y  D  F 
                    Query_7553   178  CAGTTCTCCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCCATGTATTACTGTGCGAGGCTTAATCTCCCCTCGTATTACGATTTT  267
V  93.4% (226/242)  IGHV4-59*08  229  ..............G....G...................A.....G................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (18/18)   IGHD3-3*01   1    -----------------------------------------------------------------------------.............  13

                                      3-IMGT----------------------------->                                 
                                       W  S  G  G  N  Y  Y  Y  G  L  D  A  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7553   268  TGGAGCGGAGGCAACTACTACTACGGTTTGGACGCCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  336
D  100.0% (18/18)   IGHD3-3*01   14   .....----------------------------------------------------------------  18
J  96.4% (54/56)    IGHJ6*02     7    -------------..............A......T..................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_73353

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            363     1e-102
IGHD1-26*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCGA	TATACTGGGAGCTAC	CGAC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCGATATACTGGGAGCTACCGACATGCTTTTGATATC	ARFRYTGSYRHAFDI	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	111	3	0	97.4
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T  S  S  N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_7554   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCAGTAGTAATTGGTGGAGTTGGGTCCGCCAGTCCCCGGGGAAGGGGCTG  90
V  97.2% (239/246)  IGHV4-4*02   49   ........................................G.........C.....................C....A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  E  S  K 
                    Query_7554   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACGAGTCCAAG  180
V  97.2% (239/246)  IGHV4-4*02   139  .......................................................................A.........A........  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  R  Y  T  G  S  Y  R 
                    Query_7554   181  AACCACTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGATTCCGATATACTGGGAGCTACCGA  270
V  97.2% (239/246)  IGHV4-4*02   229  .....G............................................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  93.3% (14/15)    IGHD1-26*01  3    ------------------------------------------------------------------------....G..........---  17

                                      -------------->                               
                                       H  A  F  D  I  W  S  Q  G  T  M  V  T  V  S  
                    Query_7554   271  CATGCTTTTGATATCTGGAGCCAAGGGACAATGGTCACCGTCTCTT  316
J  97.8% (44/45)    IGHJ3*02     3    -.................G...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_53671

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            341     5e-96
IGHD5-12*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	A	TGGATATAGT	TATGGCCGGGCCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATGGATATAGTTATGGCCGGGCCCCCTTTGACAAC	ANGYSYGRAPFDN	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_7555   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACAACCTATTGGATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (232/246)  IGHV3-7*03   47   ..........................................GT.G...........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  K  E  D  G  S  E  K  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7555   91   AGTGGGTGGCCAGCATAAAGGAAGATGGAAGTGAGAAGCACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.3% (232/246)  IGHV3-7*03   137  ............A.......C................AT...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  V  F  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  N  G  Y  S  Y  G  R  A  
                    Query_7555   181  AGAACTCTGTGTTTCTGCAAATGAACAGCCTGAGAGCCGGGGACACGGCCGTATATTACTGTGCGAATGGATATAGTTATGGCCGGGCCC  270
V  94.3% (232/246)  IGHV3-7*03   227  .......AC...A..........................A............G.............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD5-12*01  2    -------------------------------------------------------------------..........-------------  11

                                      ---------->                                  
                                      P  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7555   271  CCTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (43/44)    IGHJ4*02     5    -.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_53673

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-19*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGCCCCCCGTACCGCA	TATAGCAGTGCCTG	CCACG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGCCCCCCGTACCGCATATAGCAGTGCCTGCCACGGACTAC	ARWPPVPHIAVPATDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	27	25	25	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	241	235	6	0	97.5


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        L  S  L  T  C  T  V  S  G  G  S  M  S  R  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W
                    Query_7556   3    CCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTAGGTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTG  92
V  97.5% (235/241)  IGHV4-59*01  51   ....................................C.....T...............................................  140
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W

                                      ---------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IM
                                        I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  M  N  Q
                    Query_7556   93   GATTGGGTATATCTATTACAGTGGGGGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCATGAACCA  182
V  97.5% (235/241)  IGHV4-59*01  141  .........................A.........................................................A......  230
                                        I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q

                                      GT----------------------------------------------------><-------------------CDR3-IMGT------
                                        F  S  L  K  M  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  W  P  P  V  P  H  I  A  V  P
                    Query_7556   183  GTTCTCCCTGAAGATGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGATGGCCCCCCGTACCGCATATAGCAGTGCC  272
V  97.5% (235/241)  IGHV4-59*01  231  .............C.....................................C.........-----------------------------  291
                                        F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                              
D  92.9% (13/14)    IGHD6-19*01  4    ------------------------------------------------------------------------------..........G.  15

                                      ------------>                                  
                                        A  T  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_7556   273  TGCCACGGACTACTGGGGCCAGGGAACCCTGGTCATCGTTTCCTCAG  319
D  92.9% (13/14)    IGHD6-19*01  16   ..---------------------------------------------  17
J  95.0% (38/40)    IGHJ4*02     9    -------............................C...C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_69721

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           361     4e-102
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ3*01                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATA	CTACAGGTCG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACAGGTCGTGATCCTTTTGATTTC	ARVSREYYDTTGRDPFDF	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  T  G  K  G  L  
                    Query_7557   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTACAGGCAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-33*01  47   ............................................AG..A.........................C...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7557   91   AGTGGGTGGCAGTTATTTGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  96.4% (240/249)  IGHV3-33*01  137  ................A.....................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_7557   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  96.4% (240/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  F  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_7557   271  CTACAGGTCGTGATCCTTTTGATTTCTGGGGCCAAGGGACAATTCTCACCGTCTCTTCAG  330
J  92.0% (46/50)    IGHJ3*01     1    ----------....G........G...................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_69726

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           324     8e-91
IGHD3-3*01                                                                                            23.8    0.011
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTCTTTAATG	ACGATTATTGGAGTG	ATGGTTTTCGTCGACACCTAGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCTTTAATGACGATTATTGGAGTGATGGTTTTCGTCGACACCTAGGGCTTGACAAC	ARHVFNDDYWSDGFRRHLGLDN	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	229	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  V  T  A  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_7558   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCTGTCACTGCCAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  91.2% (229/251)  IGHV4-39*01  49   ...............................G...CA...GCAGT............................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  H  T  S 
                    Query_7558   91   CTGGAGTGGATTGGAAATATCTATTATAGTGGGACCACCTACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCCGTGCACACGTCC  180
V  91.2% (229/251)  IGHV4-39*01  139  ..............G.G.................G...............G.......................A.....AG........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  H  V  F  N  D  D  Y 
                    Query_7558   181  AAGAATCAGTTCTCCCTGAGGCTGAATTCTGTGACCGCCGCAGACTCGGCTGTATATTACTGTGCGAGACATGTCTTTAATGACGATTAT  270
V  91.2% (229/251)  IGHV4-39*01  229  .....C.............A.....GC..................A.......G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  93.3% (14/15)    IGHD3-3*01   6    ----------------------------------------------------------------------------------......T.  13

                                      --CDR3-IMGT--------------------------->                                  
                                       W  S  D  G  F  R  R  H  L  G  L  D  N  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_7558   271  TGGAGTGATGGTTTTCGTCGACACCTAGGGCTTGACAACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  343
D  93.3% (14/15)    IGHD3-3*01   14   .......------------------------------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    -------------------------------.....T........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_53674

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD6-25*01                                                                                           14.1    9.4   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAGG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTC	ARQSSAGRTRYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  T  A  F  G  Y  S  F  T  S  Y
                    Query_7559   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTACGGCTTTTGGATACAGCTTTACCAGTTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ....................................C.........................A..G..C..................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_7559   91   TTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACGAGATACAGTCC  180
V  95.2% (277/291)  IGHV5-51*01  96   C......................T......................................................C........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_7559   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .............................C.............A.......................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  F  C  A  R  Q  S  S  A  G  R  T  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_7559   271  CATGTATTTTTGTGCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTC  360
V  95.2% (277/291)  IGHV5-51*01  276  ........AC...........---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------............................................C..  61

                                       
                                       
                    Query_7559   361  A  361
J  97.9% (47/48)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_53677

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     5e-96
IGHD3-9*01                                                                                            12.2    33   
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-9*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACATGGGCTC	GACTGG	GAAAACAGTTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACATGGGCTCGACTGGGAAAACAGTTATGATGCTTTTGATATT	ARTHGLDWENSYDAFDI	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  N  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7560   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTGCCTTCAGTAACTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (233/248)  IGHV3-21*01  47   ..................................CA.........G.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  R  S  S  S  Y  I  L  S  T  H  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7560   91   AGTGGGTCTCATCGATTAGTAGGAGTAGTAGTTATATATTGTCTACACATTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCC  180
V  94.0% (233/248)  IGHV3-21*01  137  .............C........T...........C....AC.ACG..G.C.......................................A  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      Q  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  T  H  G  L  D  W  E  
                    Query_7560   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAACACATGGGCTCGACTGGGAAA  270
V  94.0% (233/248)  IGHV3-21*01  227  ....................................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-9*01   16   --------------------------------------------------------------------------------......----  21

                                      GT-------------------->                                  
                                      N  S  Y  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7560   271  ACAGTTATGATGCTTTTGATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  327
J  98.0% (49/50)    IGHJ3*02     1    -------...............C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_69725

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           361     5e-102
IGHD7-27*01                                                                                           12.2    35    
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGAAGTGACAGCATCCAAA	TGGGGA	N/A	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGAAGTGACAGCATCCAAATGGGGATCGACCCC	ARAGSDSIQMGIDP	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	63	6	0	91.3
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	260	29	0	90


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  R  V  S  C  K  T  S  G  Y  T  F  T  R  Y 
                    Query_7561   2    CAGCTGGTGCAGTCTGGAGCTGAAGTGAAGAGGCCTGGGGCCTCAGTGAGAGTCTCCTGCAAGACTTCCGGTTACACCTTTACTCGCTAT  91
V  90.0% (260/289)  IGHV1-18*01  7    .......................G.......A.................AG............G....T..............CA.....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  T  Y  N  G  N  T  N  Y  A  K 
                    Query_7561   92   GGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCGGCACTTACAATGGTAATACAAACTATGCAAAA  181
V  90.0% (260/289)  IGHV1-18*01  97   .......G..........................................A......A..G.............C............C.G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  K  D  R  V  T  L  T  T  D  T  S  S  T  T  V  Y  M  E  V  R  S  L  R  S  D  D  A  A 
                    Query_7561   182  AAGTTTAAGGACAGAGTCACCTTGACCACAGACACATCTTCGACCACAGTCTACATGGAGGTGAGGAGCCTCAGATCTGACGACGCGGCC  271
V  90.0% (260/289)  IGHV1-18*01  187  ...C.CC...G..........A................CA...G.....C..........C..........G............A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  A  G  S  D  S  I  Q  M  G  I  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7561   272  GTCTATTATTGTGCGAGAGCGGGAAGTGACAGCATCCAAATGGGGATCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  90.0% (260/289)  IGHV1-18*01  277  ..G.....C..........---------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD7-27*01  6    ----------------------------------------......------------------------------------------  11
J  100.0% (42/42)   IGHJ5*02     10   ----------------------------------------------..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_311826

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            417     6e-119
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	112	2	0	98.2
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	273	6	0	97.8


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_7562  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  97.8% (273/279)  IGHV6-1*01  26   ...........................................................G......G....AG.................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_7562  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  97.8% (273/279)  IGHV6-1*01  116  ..........................................................................................  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_7562  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCCGTGTATTACT  270
V  97.8% (273/279)  IGHV6-1*01  206  ..............A................................................................T..........  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------CDR3-IMGT--------->                                  
                                     C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7562  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  97.8% (273/279)  IGHV6-1*01  296  .........---------------------------------------------------------  304
                                     C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02    4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_311824

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           410     1e-116
IGHD2-2*01                                                                                            10.3    136   
IGHJ3*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTGAAGTCTTT	TACCA	CCGAG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATATC	ASLKSFTTEDAFDI	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	18	6	0	75
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	292	277	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  
                    Query_7563   2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATTCGACTTTACCA  91
V  94.9% (277/292)  IGHV5-51*01  2    ....G.....G...................................................................A.AG........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  S  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  D  D  S  D  T  R  Y  
                    Query_7563   92   CCTCTTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAATGGATGGGGGTCATCTATCCTGATGACTCTGATACCAGATACA  181
V  94.9% (277/292)  IGHV5-51*01  92   G..AC.........................................G.........A............G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  S  A  Y  L  Q  W  G  S  L  K  A  S  D  
                    Query_7563   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACAGTGCCTACCTGCAGTGGGGCAGCCTGAAGGCCTCGGACA  271
V  94.9% (277/292)  IGHV5-51*01  182  ................................................G..CC...............A.....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  A  S  L  K  S  F  T  T  E  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  
                    Query_7563   272  CCGCCATGTATTACTGTGCGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTT  361
V  94.9% (277/292)  IGHV5-51*01  272  ......................--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (5/5)     IGHD2-2*01   16   ----------------------------------.....---------------------------------------------------  20
J  100.0% (49/49)   IGHJ3*02     2    --------------------------------------------..............................................  47

                                         
                                      S  
                    Query_7563   362  CAG  364
J  100.0% (49/49)   IGHJ3*02     48   ...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_311825

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         332     3e-93
IGHD3-22*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTGGGT	TAGGGGTTAT	AAGGGTTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTGGGTTAGGGGTTATAAGGGTTTCTTTGACTAC	ARDPWVRGYKGFFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7564     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  92.4% (231/250)  IGHV3-30-3*01  47   ..............................................C......................................G....  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  D  E  N  Y  K  Y  Y  T  D  S  L  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7564     91   AGTGGGTGGCAGTTATCTCATATGATGAAAACTATAAATATTACACGGACTCCCTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.4% (231/250)  IGHV3-30-3*01  137  ................A..........G..G.A.......C...G.A......G....................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        R  N  T  L  Y  L  Q  M  D  T  L  T  L  D  D  T  A  V  Y  Y  C  A  R  D  P  W  V  R  G  Y  
                    Query_7564     181  GGAACACCCTGTATCTGCAGATGGACACCCTGACACTTGACGACACGGCTGTGTATTACTGTGCGAGAGATCCTTGGGTTAGGGGTTATA  270
V  92.4% (231/250)  IGHV3-30-3*01  227  A......G...........A...A...G.....G.GC...G.............................--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-22*01    16   -------------------------------------------------------------------------------...T......-  25

                                        ---------------->                                  
                                        K  G  F  F  D  Y  W  G  Q  G  S  L  V  I  F  S  S  
                    Query_7564     271  AGGGTTTCTTTGACTACTGGGGCCAGGGAAGTCTGGTCATTTTCTCCTCAG  321
J  88.6% (39/44)    IGHJ4*02       5    -------.......................CC.......CCG.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_311822

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           371     6e-105
IGHD3-10*01                                                                                           19.9    0.15  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	TTCG	CTATGTTTCGGGG	TTCAGGG	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCATTCGCTATGTTTCGGGGTTCAGGGGGTATGGACGTC	AFAMFRGSGGMDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	241	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7565   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  98.4% (241/245)  IGHV3-74*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  K  S  D  G  S  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7565   91   TGTGGGTCTCACGTATTAAGAGTGATGGGAGTAGCACATACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (241/245)  IGHV3-74*01  137  ...................T..................AG..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  F  A  M  F  R  G  S  G  
                    Query_7565   181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCATTCGCTATGTTTCGGGGTTCAGGGG  270
V  98.4% (241/245)  IGHV3-74*01  227  .......G.........................................................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.3% (12/13)    IGHD3-10*01  7    ---------------------------------------------------------------------.....G.......--------  19
J  100.0% (45/45)   IGHJ6*02     18   -----------------------------------------------------------------------------------------.  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7565   271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (45/45)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_148438

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           276     3e-76
IGHD3-10*02                                                                                           14.1    9.1  
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	CCGCAGCGCA	ATGTTCG	CAGGCTCGCCATCGGGAGCCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGACCGCAGCGCAATGTTCGCAGGCTCGCCATCGGGAGCCAACTACTACTCCTACGGGATGGACGTC	AKDRSAMFAGSPSGANYYSYGMDV	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	213	37	0	85.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  T  A  H  G  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_7566   1    GGTCCCTGAGACTCTCCTGTGCAACCTCAGGATTCACCTTCACCGCCCATGGCATGCACTGGGTCCGCCAGGCTCCTGGCAGGGGTCTAG  90
V  85.2% (213/250)  IGHV3-30*18  47   .......................G....T.............GTAG.T............................A....A...G..G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  L  S  F  D  G  G  G  R  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  V  S  
                    Query_7566   91   AGTGGGTAGCCGTTTTGTCATTTGATGGAGGTGGCAGGTATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGTCTCCA  180
V  85.2% (213/250)  IGHV3-30*18  137  .......G..A...A.A....A.......A..AAT.AA..C..........................................AAT....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      T  N  T  V  Y  L  Q  M  A  S  L  R  P  D  D  T  A  V  Y  Y  C  A  K  D  R  S  A  M  F  A  
                    Query_7566   181  CGAACACGGTGTATCTGCAAATGGCCAGCCTGCGACCTGACGACACAGCTGTCTATTATTGTGCGAAGGACCGCAGCGCAATGTTCGCAG  270
V  85.2% (213/250)  IGHV3-30*18  227  A.......C..............AA.......A..G....G.....G.....G.....C........A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-10*02  9    --------------------------------------------------------------------------------.......---  15

                                      ----CDR3-IMGT------------------------------>                                 
                                      G  S  P  S  G  A  N  Y  Y  S  Y  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_7566   271  GCTCGCCATCGGGAGCCAACTACTACTCCTACGGGATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  347
J  94.9% (56/59)    IGHJ6*02     4    ------------------.........A......T...............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_311821

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           361     4e-102
IGHD6-13*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	GCAGCAGATGG	AC	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCAGCAGATGGACTACGACTACTACTACGGTTTTGACGTC	ARGQQMDYDYYYGFDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7567   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAATACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-33*01  47   ..........................................G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  N  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7567   91   AGTGGGTGGCAGTCATATGGTATGATGGAAGTAATAAATACAATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.4% (240/249)  IGHV3-33*01  137  .............T...........................T...C............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  D  T  L  Y  L  Q  M  K  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  Q  Q  M  D  Y  D  
                    Query_7567   181  AGGACACACTGTATCTGCAAATGAAGAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGCAGCAGATGGACTACGACT  270
V  96.4% (240/249)  IGHV3-33*01  227  ..A....G.................C..........C................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD6-13*01  8    ----------------------------------------------------------------------.......C...---------  18
J  95.0% (57/60)    IGHJ6*02     3    -----------------------------------------------------------------------------------...T...  9

                                      T------------------>                                 
                                      Y  Y  Y  G  F  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7567   271  ACTACTACGGTTTTGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  95.0% (57/60)    IGHJ6*02     10   ...........A.G.......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_148435

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_7568   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AGT.A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S 
                    Query_7568   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T.A....A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_7568   181  CAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ..............G.....C..................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7568   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_148437

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           405     3e-115
IGHD4-17*01                                                                                           16.1    2.4   
IGHJ3*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAATGG	TGACTTCGGTG	TTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAATGGTGACTTCGGTGTTCTTGATATT	ARENGDFGVLDI	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T  T  H
                    Query_7569   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACAGTTTCACCACCCA  90
V  94.5% (275/291)  IGHV1-46*01  6    ..................G..........................................................CC.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        H  M  H  W  V  R  Q  V  P  G  L  G  L  E  W  M  G  I  I  N  P  S  G  G  R  T  S  Y  A  Q
                    Query_7569   91   CCATATGCACTGGGTGCGACAGGTCCCTGGACTAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGGACAAGTTATGCACA  180
V  94.5% (275/291)  IGHV1-46*01  96   .T.....................C........A..........................................C.....C..C.....  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  R  S  T  S  T  V  Y  M  E  M  N  S  L  R  S  E  D  T  A
                    Query_7569   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACAGGTCCACGAGTACAGTCTACATGGAGATGAACAGCCTGAGATCTGAGGACACGGC  270
V  94.5% (275/291)  IGHV1-46*01  186  ...................................C.........C...............C...G........................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  W  A  R  E  N  G  D  F  G  V  L  D  I  W  G  Q  G  A  M  V  S  V  S  S  
                    Query_7569   271  CGTGTATTACTGGGCGAGAGAGAATGGTGACTTCGGTGTTCTTGATATTTGGGGCCAAGGGGCAATGGTCTCCGTCTCTTCAG  353
V  94.5% (275/291)  IGHV1-46*01  276  ............T........--------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                 
D  90.9% (10/11)    IGHD4-17*01  1    ---------------------------.....A.....---------------------------------------------  11
J  92.9% (39/42)    IGHJ3*02     9    -----------------------------------------.......C............A........A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_148436

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            361     4e-102
IGHD3-10*01                                                                                           10.3    126   
IGHJ3*01                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GAAT	TTATA	N/A	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGAATTTATAATGGTTTTGATGTC	ARGIYNGFDV	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	158	27	21	6	0	77.8
FR3-IMGT	159	272	114	105	9	0	92.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	255	24	0	91.4


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  L  I  T  C  D  I  T  R  D  S  V  S  S  N  T  V  A  W  N  W  
                    Query_7570   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTTAATCACCTGTGACATCACCAGGGACAGTGTCTCTAGTAACACTGTTGCTTGGAATTGGA  90
V  91.4% (255/279)  IGHV6-1*01   26   ..............................C.C.........C....T..G................C....G..C.........C....  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  R  S  D  Y  A  P  S  V  K  
                    Query_7570   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATATTACAGATCCAAGTGGCGTTCTGACTATGCACCATCTGTGAAAA  180
V  91.4% (255/279)  IGHV6-1*01   116  ..............................................C.....G.........TA.AA...T......GT...........  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  V  N  P  D  T  S  K  N  Q  F  S  L  H  L  N  S  V  T  P  E  D  T  A  I  Y  Y  
                    Query_7570   181  GTCGGATAACCGTCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTATTTATTATT  270
V  91.4% (255/279)  IGHV6-1*01   206  ....A......A.....................................G..............................G.G.....C.  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------CDR3-IMGT--------->                                  
                                      C  A  R  G  I  Y  N  G  F  D  V  W  G  P  G  T  S  V  T  V  S  S  
                    Query_7570   271  GTGCAAGAGGAATTTATAATGGTTTTGATGTCTGGGGCCCAGGGACATCGGTCACCGTCTCTTCAG  336
V  91.4% (255/279)  IGHV6-1*01   296  .........---------------------------------------------------------  304
                                      C  A  R                                                           
D  100.0% (5/5)     IGHD3-10*01  25   -------------.....------------------------------------------------  29
J  91.7% (44/48)    IGHJ3*01     3    ------------------...C.................A.......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_148431

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           361     4e-102
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTTGTGG	TACTCTGGTTCGGGGAGT	AAAACCCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTTGTGGTACTCTGGTTCGGGGAGTAAAACCCATTTTGACTAC	ARGLWYSGSGSKTHFDY	246	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G  
                    Query_7571   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  96.4% (240/249)  IGHV4-31*03  50   .....TCC...A................................................G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_7571   94   TGGAGTGGATTGGGTACATTTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATTTCAGTAGACACGTCTA  183
V  96.4% (240/249)  IGHV4-31*03  140  ...................C.....................................................A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  Q  F  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  W  Y  S  G  S  
                    Query_7571   184  AGAACCAGTTCTCCCTGAAGCTGCGCTCTGCGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGTTTGTGGTACTCTGGTTCGG  273
V  96.4% (240/249)  IGHV4-31*03  230  .......................A......T......................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD3-10*01  5    -----------------------------------------------------------------------------....A........  17

                                      GT-------------------->                                  
                                      G  S  K  T  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7571   274  GGAGTAAAACCCATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  94.4% (17/18)    IGHD3-10*01  18   .....----------------------------------------------------  22
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_148430

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD2-8*01                                                                                            12.2    31   
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CTAATG	TCCCGACTGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGTCCCGACTGAACTACGGCATGGACGTC	ARLMSRLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	227	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  I  S  G  G  S  F  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  E  G  L  E 
                    Query_7572   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGGCTCCTTCAGTTCTTATTACTGGAGCTGGATTCGGCAGTCCCCAGGGGAGGGACTGGAG  90
V  93.4% (227/243)  IGHV4-59*01  49   .....................G..............A.....AG...C..............C......C........A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7572   91   TGGATTGGCTATGTCTACTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  93.4% (227/243)  IGHV4-59*01  139  ........G...A....T..C.....................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_7572   181  CAGTTCTCCCTGAGGCTGACGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGACTAATGTCCCGACTGAACTACGGCATG  270
V  93.4% (227/243)  IGHV4-59*01  229  .............A.....GC..........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-8*01   12   ---------------------------------------------------------------......---------------------  17
J  96.0% (48/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7572   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  309
J  96.0% (48/50)    IGHJ6*02     24   ...................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_311828

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           392     2e-111
IGHD2-15*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGC	ATATTGTAGTGATAGTAACTGCTAC	CCGAGGGAGCG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGCATATTGTAGTGATAGTAACTGCTACCCGAGGGAGCGCTACTTTGACCAC	ARLAYCSDSNCYPRERYFDH	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  A  G  E  S  L  R  I  S  C  K  V  S  G  Y  K  F  A  T  Y
                    Query_7573   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGGCGGGGGAGTCTCTGAGGATCTCCTGTAAGGTGTCTGGATACAAGTTTGCCACCTA  90
V  93.4% (270/289)  IGHV5-51*03  6    ..................................C...............A..............GT..........GC...A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  M  Y  P  S  D  S  D  A  R  Y  S  P
                    Query_7573   91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATGTATCCTAGTGACTCTGATGCCAGATACAGCCC  180
V  93.4% (270/289)  IGHV5-51*03  96   C...................................................A....C......G...........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  G  L  E  A  S  D  T  A
                    Query_7573   181  GTCCTTTGAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGTGGCCTGGAGGCCTCGGACACCGC  270
V  93.4% (270/289)  IGHV5-51*03  186  ......CC................C.........................................CA.....A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  Y  C  A  R  L  A  Y  C  S  D  S  N  C  Y  P  R  E  R  Y  F  D  H  W  G  Q  G  T  L
                    Query_7573   271  CATGTATTACTGTGCGAGACTGGCATATTGTAGTGATAGTAACTGCTACCCGAGGGAGCGCTACTTTGACCACTGGGGCCAGGGAACCCT  360
V  93.4% (270/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  88.0% (22/25)    IGHD2-15*01  4    ------------------------...........G.G...G.......-----------------------------------------  28
J  95.7% (45/47)    IGHJ4*02     2    ------------------------------------------------------------..........T...................  31

                                                       
                                        V  T  V  S  S  
                    Query_7573   361  GGTCACCGTCTCGTCAG  377
J  95.7% (45/47)    IGHJ4*02     32   ............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_311829

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           262     4e-72
IGHD2-2*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GACGA	ATACTGTACTACTCCCGGCTGCT	TTAAGTACCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGACGAATACTGTACTACTCCCGGCTGCTTTAAGTACCCTTGACTCC	VKTNTVLLPAALSTLDS	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	125	24	13	8	3	54.2
FR3-IMGT	126	239	114	99	15	0	86.8
CDR3-IMGT (germline)	240	244	5	4	1	0	80
Total	N/A	N/A	247	209	35	3	84.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  V  Y  V  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_7574   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCGTCTATGTCATGGCGTGGGTCCGCCAGGCTCCAGGGAGGGGCCTGG  90
V  84.6% (209/247)  IGHV3-23*01  47   ..........................................G.AG.....C....AGC......................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  T     G  N  G  A  A  A  Y  Y  A  D  S  V  K  G  R  F  N  I  S  R  D  N  S  
                    Query_7574   91   AGTGGGTCGCAGCGACT---GGAAATGGTGCAGCCGCATACTATGCCGACTCCGTGAAGGGCCGGTTCAACATCTCCAGGGACAATTCCG  177
V  84.6% (209/247)  IGHV3-23*01  137  ........T....T.T.AGT..T.G.....GTAG.A.......C..A......................C.........A.........A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      D  N  T  L  F  L  D  M  S  G  L  R  A  D  D  T  A  V  Y  Y  C  V  K  T  N  T  V  L  L  P  
                    Query_7574   178  ATAATACCCTTTTTCTGGATATGAGCGGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGTGAAGACGAATACTGTACTACTCCCGG  267
V  84.6% (209/247)  IGHV3-23*01  227  .G..C..G..G.A....C.A....A.A.............G......................C...-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  78.3% (18/23)    IGHD2-2*01   4    ------------------------------------------------------------------------...T....G..G.A..A.  21

                                      GT-------------------->                                  
                                      A  A  L  S  T  L  D  S  W  G  Q  G  A  L  V  T  V  A  S  
                    Query_7574   268  CTGCTTTAAGTACCCTTGACTCCTGGGGCCAGGGAGCCCTGGTCACCGTCGCCTCAG  324
D  78.3% (18/23)    IGHD2-2*01   22   .....----------------------------------------------------  26
J  92.9% (39/42)    IGHJ4*02     7    ---------------......A.............A..............T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_297708

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           296     2e-82
IGHD3-10*01                                                                                           12.2    31   
IGHJ2*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGA	CGGGGA	TTGGAAG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGACGGGGATTGGAAGTTCGATCTC	ARHDGDWKFDL	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	220	31	0	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  I  S  S  R  F  F  W  G  W  L  R  Q  P  P  K  K  G 
                    Query_7575   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCATCAGTAGTCGTTTCTTCTGGGGCTGGCTCCGCCAGCCCCCAAAGAAGGGG  90
V  87.6% (220/251)  IGHV4-39*01  49   ...............................G........G.......A...A..A..........A..............GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  H  D  S  G  N  R  W  S  N  P  T  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_7575   91   CTGGAGTGGATTGGGACTATCCATGACAGTGGGAACAGATGGTCCAACCCGACCCTCAAGAGTCGACTCACCATATCGGTGGACACGTCC  180
V  87.6% (220/251)  IGHV4-39*01  139  ................G....T..T.T.......G..CC.AC.A.......T..............G..........C..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       M  N  Q  F  S  L  T  I  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  H  D  G  D  W  K  F 
                    Query_7575   181  ATGAACCAGTTCTCCCTGACGATTTCCTCTATGACCGCCGCTGACACGGCTGTCTATTACTGTGCGAGACATGACGGGGATTGGAAGTTC  270
V  87.6% (220/251)  IGHV4-39*01  229  .A.................A.C.GAG....G..........A...........G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01  15   --------------------------------------------------------------------------......----------  20
J  95.3% (41/43)    IGHJ2*01     11   ---------------------------------------------------------------------------------------...  13

                                      ----->                                  
                                       D  L  W  G  R  G  S  Q  V  T  V  S  S  
                    Query_7575   271  GATCTCTGGGGCCGTGGCTCCCAGGTCACTGTCTCCTCAG  310
J  95.3% (41/43)    IGHJ2*01     14   ..................A...T.................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_178277

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           294     6e-82
IGHD3-10*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              39.1    5e-07


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACGTC	TTACTATGTTTCGGGG	CCACCGACCGAC	CCAGG	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	216	28	0	88.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  K  D  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_7576   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAAGGACTACGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  88.5% (216/244)  IGHV3-23*01  47   ..........................................GCAG...T.......G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  N  D  T  G  L  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7576   91   AATGGGTCTCAAGTATTAATGATACTGGTCTTACTACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  88.5% (216/244)  IGHV3-23*01  137  .G.........GC.....G..G..G....GG..GC.............................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT---------------------------------------------------->                            
                                      K  N  I  V  Y  L  Q  M  D  S  L  R  G  A  D  T  A  I  Y  Y  C  A  R  L  T  M  F  R  G  H  
                    Query_7576   181  AAAACATTGTGTATCTGCAAATGGACAGCCTGAGAGGCGCGGACACGGCCATTTATTATTGTGCACGTCTTACTATGTTTCGGGGCCACC  270
V  88.5% (216/244)  IGHV3-23*01  227  .G....CGC..............A............C..A..........G.A.....C.....--------------------------  290
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.8% (15/16)    IGHD3-10*01  4    ---------------------------------------------------------------------........G.......-----  19

                                                                          
                                      R  P  T  Q  G  A  L  V  T  V  S  S  
                    Query_7576   271  GACCGACCCAGGGAGCCCTAGTCACCGTCTCTTCAG  306
J  89.7% (26/29)    IGHJ4*02     20   -------.......A....G...........C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_297706

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           397     8e-113
IGHD5-12*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD5-12*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTAAACGAAA	ATAGTGGCTACGATTA	TGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTAAACGAAAATAGTGGCTACGATTATGCTGACTAC	ARLNENSGYDYADY	290	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	73	2	0	97.3
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	294	274	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  A 
                    Query_7577   2    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTGCC  91
V  93.2% (274/294)  IGHV1-18*04  1    .....T.....G......................................................................C....A..  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  S  F  S  W  V  R  Q  A  P  G  Q  G  L  E  *  M  G  R  F  S  T  Y  N  G  D  T  N  Y 
                    Query_7577   92   AGCTACTCTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGTCTTGAGTGAATGGGACGGTTCAGCACTTACAATGGTGACACAAATTAT  181
V  93.2% (274/294)  IGHV1-18*04  91   ......GG.A...............................G........G......T..A.....G...........A.......C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  L  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  V  L  R  S  L  R  S  D  D 
                    Query_7577   182  GCACAGAACCTCCAGGGCAGAGTCACCCTGACCACAGACACATCCACGAGCACAGCCTACATGGTGCTGAGGAGCCTTAGATCTGACGAC  271
V  93.2% (274/294)  IGHV1-18*04  181  ........G..................A....................................A............G............  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  L  N  E  N  S  G  Y  D  Y  A  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_7577   272  ACGGCCGTTTATTATTGTGCGAGATTAAACGAAAATAGTGGCTACGATTATGCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  361
V  93.2% (274/294)  IGHV1-18*04  271  ........G.....C.........------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (16/16)   IGHD5-12*01  7    ----------------------------------................----------------------------------------  22
J  100.0% (39/39)   IGHJ4*02     8    -----------------------------------------------------.....................................  44

                                        
                                       S
                    Query_7577   362  TC  363
J  100.0% (39/39)   IGHJ4*02     45   ..  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_297707

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           336     1e-94
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	N/A	N/A	TCGTGCAGAAAGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGTCGTGCAGAAAGGCTTTGACTTC	ATVVQKGFDF	249	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	104	10	0	91.2
CDR3-IMGT (germline)	249	255	7	6	1	0	85.7
Total	N/A	N/A	255	235	20	0	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_7578   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAAAGCCTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.2% (235/255)  IGHV3-15*01  47   .......T......................................C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  G  I  D  G  G  T  A  D  Y  A  A  L  V  K  G  R  C  T  I  S  R  D  
                    Query_7578   91   AATGGGTTGGCCGTATTAAAAGCGGAATTGATGGTGGGACCGCAGACTACGCTGCACTCGTGAAAGGCAGATGCACCATCTCAAGAGATG  180
V  92.2% (235/255)  IGHV3-15*01  137  .G.....................AA..C............AA...............C..............T.................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--
                                      D  L  K  N  T  L  Y  L  Q  L  N  S  V  R  S  E  D  T  G  V  Y  Y  C  A  T  V  V  Q  K  G  
                    Query_7578   181  ATTTAAAAAACACACTGTATCTGCAACTGAACAGCGTGAGAAGCGAGGACACAGGCGTCTATTACTGTGCCACAGTCGTGCAGAAAGGCT  270
V  92.2% (235/255)  IGHV3-15*01  227  ...C.........G............A........C...A..C...........C...G.........A......---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7578   271  TTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.7% (43/44)    IGHJ4*02     7    ......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_297704

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           344     6e-97
IGHD1-1*01                                                                                            19.9    0.15 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAGG	AACTGGAACG	GGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATAAGGAACTGGAACGGGGTTTTGACTAC	ARDKELERGFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  I  H  W  V  R  Q  P  P  G  R  G  L  
                    Query_7579   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTACTGGATACACTGGGTCCGCCAACCTCCAGGGAGGGGGCTGG  90
V  94.0% (235/250)  IGHV3-74*01  47   .............................................G.........G...............G.........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  S  T  D  G  T  R  T  T  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  A  
                    Query_7579   91   TGTGGGTCTCACGTATTAGTACAGATGGGACAAGAACAACCTACGCGGACTCCGTGACGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-74*01  137  ..................A..GT.......GT..C....G.................A................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  K  E  L  E  R  G  
                    Query_7579   181  AGAACACGGTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCAAGAGATAAGGAACTGGAACGGGGTT  270
V  94.0% (235/250)  IGHV3-74*01  227  ........C........................................T........C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD1-1*01   6    ---------------------------------------------------------------------------..........-----  15
J  100.0% (43/43)   IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7579   271  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (43/43)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_297705

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            333     1e-93
IGHJ2*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	N/A	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	GCACGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCACGGATCCTGGTGCTTCGATTTC	ARHGSWCFDF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  E  A  S  G  F  T  F  N  T  Y  W  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_7580  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAATACCTACTGGATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (230/247)  IGHV3-7*03  47   .....................C....................G..G...T......A.................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  T  N  I  K  T  D  G  S  T  Q  Y  Y  V  D  S  V  K  G  R  F  T  I  S  S  D  N  P  
                    Query_7580  91   AGTGGGTGACCAACATAAAGACAGATGGAAGTACTCAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGTGACAACCCCA  180
V  93.1% (230/247)  IGHV3-7*03  137  ........G...........CA..........GAGA...........................................A......G...  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                     T  N  S  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  H  G  S  W  C  F  D  
                    Query_7580  181  CGAACTCACTGTATTTGCAACTGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGGCACGGATCCTGGTGCTTCGATT  270
V  93.1% (230/247)  IGHV3-7*03  227  A.............C.....A..............................................-----------------------  293
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  94.0% (47/50)    IGHJ2*01    4    ----------------------------------------------------------------------------.....A.......C  17

                                     ->                                  
                                     F  W  G  R  G  T  L  V  S  V  S  S  
                    Query_7580  271  TCTGGGGCCGTGGCACCCTGGTCAGTGTCTCCTCAG  306
J  94.0% (47/50)    IGHJ2*01    18   ........................C...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_297702

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           410     1e-116
IGHD6-25*01                                                                                           12.2    35    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TT	AGCGGC	GAAGGTAACCTTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTAGCGGCGAAGGTAACCTTATTGACTAC	AKLSGEGNLIDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  R  Y
                    Query_7581   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCCGGATACAGCTTTACCAGGTA  90
V  95.2% (276/290)  IGHV5-51*01  6    ..................................................................T..T.................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  Y  D  V  R  Y  R  P
                    Query_7581   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTATGATGTGAGATACAGACC  180
V  95.2% (276/290)  IGHV5-51*01  96   .......................................................................C....ACC........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7581   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGCACCGCCTTTTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (276/290)  IGHV5-51*01  186  ...................................A.................ACC..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  K  L  S  G  E  G  N  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7581   271  CATTTATTACTGTGCGAAACTTAGCGGCGAAGGTAACCTTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.2% (276/290)  IGHV5-51*01  276  ...G.............G..---------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD6-25*01  10   ----------------------......-------------------------------------------------------  15
J  100.0% (42/42)   IGHJ4*02     7    -----------------------------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_297703

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7582   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_7582   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  S  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_7582   181  AGAAGTCAGTGTCTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7582   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_297700

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           293     2e-81
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GACTAGTGA	GATAGTAGTG	CTTGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGACTAGTGAGATAGTAGTGCTTGGTGCTTTCGATATG	ARETSEIVVLGAFDM	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	216	29	0	88.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  R  S  H  S  W  S  W  I  R  Q  P  P  G  K  G  M  E 
                    Query_7583   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGAGACTCCATCAGAAGTCATTCGTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGAATGGAG  90
V  88.2% (216/245)  IGHV4-59*01  49   ...................C.........T.G.........T...T.C.AC.......................A.........C.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  V  E  Y  R  G  G  S  N  Y  N  P  S  L  N  S  R  L  T  I  S  V  D  M  S  K  N 
                    Query_7583   91   TGGATTGGAAATGTCGAATACAGGGGAGGCTCCAACTACAACCCCTCCCTCAACAGTCGACTCACCATATCAGTGGACATGTCCAAGAAT  180
V  88.2% (216/245)  IGHV4-59*01  139  ........GT..A..T.T.....T..GA..A......................G......G.............A....C.........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  G  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  T  S  E  I  V  V  L  G 
                    Query_7583   181  CAGTTCTCCCTGAAGCTGGGCAGTGTGACCGCGGCGGACACGGCCGTCTATTACTGTGCGAGAGAGACTAGTGAGATAGTAGTGCTTGGT  270
V  88.2% (216/245)  IGHV4-59*01  229  ..................A..TC.........T..............G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  11   --------------------------------------------------------------------------..........------  20
J  95.6% (43/45)    IGHJ3*02     4    -----------------------------------------------------------------------------------------.  4

                                      ----------->                                
                                       A  F  D  M  W  G  Q  G  T  M  V  T  V  S  S
                    Query_7583   271  GCTTTCGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  314
J  95.6% (43/45)    IGHJ3*02     5    .....T.....C................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_297701

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           350     8e-99
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCT	GTGGCTGG	AAAAGCAGTCCG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTGTGGCTGGAAAAGCAGTCCGTGATGCTTTTGATATC	ARSVAGKAVRDAFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7584   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-30*04  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  H  K  Y  Y  A  D  S  V  K  G  R  L  T  V  S  R  D  N  S  
                    Query_7584   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTCATAAATACTATGCAGACTCCGTGAAGGGCCGACTCACCGTCTCCAGAGACAATTCCG  180
V  95.2% (236/248)  IGHV3-30*04  137  ................................A..........C.....................T.....A.................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  T  L  Y  V  Q  V  N  S  L  R  P  E  D  T  A  M  Y  Y  C  A  R  S  V  A  G  K  A  V  
                    Query_7584   181  AGAACACGCTCTATGTGCAAGTGAACAGCCTGAGACCTGAGGACACGGCTATGTATTACTGTGCGAGATCTGTGGCTGGAAAAGCAGTCC  270
V  95.2% (236/248)  IGHV3-30*04  227  ..........G...C.....A..............G..............G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18

                                      ---------------->                                
                                      R  D  A  F  D  I  W  G  R  G  T  V  V  I  V  S  S
                    Query_7584   271  GTGATGCTTTTGATATCTGGGGCCGAGGGACAGTGGTCATCGTGTCTTC  319
J  91.7% (44/48)    IGHJ3*02     1    -.......................A.......A......C...C.....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_165289

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           377     1e-106
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	ARPSSASGWHFDN	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	265	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_7585   1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCAGTTA  90
V  91.7% (265/289)  IGHV5-51*03  6    .........................G.............G.........................G.........C.GC..T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  D  I  R  Y  S  P
                    Query_7585   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGATATTAGATATAGTCC  180
V  91.7% (265/289)  IGHV5-51*03  96   C.......G..................................................AT...GG...........CC.....C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  G
                    Query_7585   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGG  270
V  91.7% (265/289)  IGHV5-51*03  186  .............................C..A.AA........G............................................C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7585   271  CATGTATTACTGTGCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  91.7% (265/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_165288

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           341     5e-96
IGHD4-17*01                                                                                           12.2    32   
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGAAGAAAG	TACGGT	CA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATGGGAAGAAAGTACGGTCAGATGCTTTTGATATA	VRDGKKVRSDAFDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  G  S  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7586   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTGGTTCCTGGATGCACTGGGTCCGCCAAGCTCCTGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-74*01  47   ...................................A........A.C.A...........................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  G  D  G  S  G  T  N  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7586   91   TGTGGGTCTCACGTATTAATGGTGATGGGAGTGGCACAAACTACGCGGAATCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCC  180
V  93.6% (234/250)  IGHV3-74*01  137  ....................A...........A......G.........C.......................................A  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      Q  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  R  D  G  K  K  V  R  S  
                    Query_7586   181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGATGACACGGCTGTATACTACTGTGTCAGAGATGGGAAGAAAGTACGGTCAG  270
V  93.6% (234/250)  IGHV3-74*01  227  .......G................................G...........G..T.......CA.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD4-17*01  5    ---------------------------------------------------------------------------------......---  10
J  97.9% (46/47)    IGHJ3*02     2    -----------------------------------------------------------------------------------------.  2

                                      ------------->                                
                                      D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S
                    Query_7586   271  ATGCTTTTGATATATGGGGCCAAGGGACAATGGTCACCGTCTCTTC  316
J  97.9% (46/47)    IGHJ3*02     3    .............C................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_165283

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD3-9*01                                                                                            25.7    0.003
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTTACCTGGAAT	TTACGATTCTGTGACTGGTTAT	CAAGTGAATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTACCTGGAATTTACGATTCTGTGACTGGTTATCAAGTGAATGCCTAC	ARLPGIYDSVTGYQVNAY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	226	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  T  F  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7587   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATACTTTCTACTGGACCTGGATCCGTCAGCCCCCAGGAAAGGGACTGGAG  90
V  93.4% (226/242)  IGHV4-59*01  49   ........................................G..G..A........G.........G...........G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  H  S  G  R  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  L  N 
                    Query_7587   91   TGGATTGGGTATATCTATCATAGTGGGAGAACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACATCTTTGAAC  180
V  93.4% (226/242)  IGHV4-59*01  139  ..................T.C........C..................................................G..CAA....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  P  G  I  Y  D  S  V  T 
                    Query_7587   181  CAGTTCTCCCTGAGACTGAGCTCCGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTTACCTGGAATTTACGATTCTGTGACT  270
V  93.4% (226/242)  IGHV4-59*01  229  .............AG........T......................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  86.4% (19/22)    IGHD3-9*01   4    --------------------------------------------------------------------------.......AT.T.....  19

                                      -------------------->                                 
                                       G  Y  Q  V  N  A  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_7587   271  GGTTATCAAGTGAATGCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  324
D  86.4% (19/22)    IGHD3-9*01   20   ......------------------------------------------------  25
J  100.0% (37/37)   IGHJ4*02     11   -----------------.....................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_195753

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           341     5e-96
IGHD2-8*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGCGGGGGGTTTATCATGA	TAATGGTG	GCC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGCGGGGGGTTTATCATGATAATGGTGGCCTTGATTTC	ARRRGVYHDNGGLDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  Y  Y  W  N  W  I  R  Q  T  P  G  K  G  P  E 
                    Query_7588   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTACTACTGGAACTGGATCCGACAGACCCCAGGGAAGGGACCTGAG  90
V  94.7% (231/244)  IGHV4-59*08  49   .......................................A...............G.........G...C...............TG...  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  R  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7588   91   TGGATTGGGTATATCTATTCCAGGGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAAC  180
V  94.7% (231/244)  IGHV4-59*08  139  ...................A...T..................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  N  L  L  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  R  G  V  Y  H  D  N  G 
                    Query_7588   181  CAGTTCTCCCTGAACCTGCTCTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGAGACGGCGGGGGGTTTATCATGATAATGGT  270
V  94.7% (231/244)  IGHV4-59*08  229  ..............G...AG.................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD2-8*01   13   -----------------------------------------------------------------------------------.......  19

                                      ----------->                                  
                                       G  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7588   271  GGCCTTGATTTCTGGGGCCAGGGAACCCTGGTCACCGTTTCCTCAG  316
D  100.0% (8/8)     IGHD2-8*01   20   .---------------------------------------------  20
J  92.9% (39/42)    IGHJ4*02     7    ----....C.A...........................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_195750

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           286     1e-79
IGHD3-10*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GATATATGGGG	TCGGGAAGTTATTAT	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGATATATGGGGTCGGGAAGTTATTATCTTGACTTC	ARGYMGSGSYYLDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	216	33	0	86.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  R  R  Y  W  I  H  W  V  R  Q  T  P  E  N  G  L  
                    Query_7589   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTCAGAAGGTACTGGATTCACTGGGTCCGCCAAACTCCAGAGAATGGCCTGG  90
V  86.7% (216/249)  IGHV3-74*01  47   ........................C..................T..C........G...............G......G...G..G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  S  Y  V  I  S  G  G  S  K  K  T  Y  A  D  S  V  K  G  P  F  T  I  S  R  D  K  G  
                    Query_7589   91   CGTGGGTCTCATATGTTATTAGTGGCGGGAGTAAGAAAACCTATGCGGACTCCGTTAAGGGACCATTTACCATCTCCAGAGACAAAGGCA  180
V  86.7% (216/249)  IGHV3-74*01  137  T..........CG.A...A.....AT.......GC.C..G...C...........G.....C.G...C.................C.C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  V  Y  P  Q  M  N  N  L  R  A  E  E  T  A  I  Y  Y  C  A  R  G  Y  M  G  S  G  S  
                    Query_7589   181  AGAACACGGTGTATCCGCAAATGAACAATCTGAGAGCCGAGGAAACGGCTATATATTATTGTGCAAGAGGATATATGGGGTCGGGAAGTT  270
V  86.7% (216/249)  IGHV3-74*01  227  ........C......T...........G...............C......G.G.....C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD3-10*01  14   --------------------------------------------------------------------------------.....G....  23

                                      ------------->                                  
                                      Y  Y  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7589   271  ATTATCTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  93.3% (14/15)    IGHD3-10*01  24   .....-------------------------------------------  28
J  97.6% (41/42)    IGHJ4*02     7    ------......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_165280

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           332     4e-93
IGHD3-16*01                                                                                           14.1    8.9  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAGAGTCAGTTCCTAAAAGG	TTACGTT	GCGAATC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGAGAGTCAGTTCCTAAAAGGTTACGTTGCGAATCACTTCTACGGCATGGACGTC	ARDESQFLKGYVANHFYGMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7590   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAACTATGCGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-30*03  47   ...........................................T.G.....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  H  D  R  S  N  R  Y  Y  A  D  P  V  R  G  R  L  T  I  S  R  D  N  S  
                    Query_7590   91   AGTGGGTGGCAGTCATATCACACGATAGAAGTAATAGATACTATGCAGACCCCGTGAGGGGCCGACTCACCATCTCCAGAGACAACTCCA  180
V  92.4% (231/250)  IGHV3-30*03  137  .............T......T.T...G.........A.............T......A.......T...................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      N  N  R  L  Y  L  E  M  N  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  E  S  Q  F  L  K  
                    Query_7590   181  ACAACAGGCTGTATCTGGAAATGAACAACCTGAGAGTTGAGGACACGGCTGTCTATTACTGTGCGAGAGATGAGAGTCAGTTCCTAAAAG  270
V  92.4% (231/250)  IGHV3-30*03  227  .G....C..........C.........G........C...............G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      DR3-IMGT-------------------------->                                 
                                      G  Y  V  A  N  H  F  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7590   271  GTTACGTTGCGAATCACTTCTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  338
D  100.0% (7/7)     IGHD3-16*01  10   -.......------------------------------------------------------------  16
J  96.2% (51/53)    IGHJ6*02     10   ---------------...A......T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_195756

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           427     1e-121
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTC	ARHGDDSGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	282	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_7591   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCACCTA  90
V  96.9% (282/291)  IGHV5-51*01  6    ..............................A...................A...................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  T  R  Y  S  P
                    Query_7591   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.9% (282/291)  IGHV5-51*01  96   ........G.................................................T...............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  A
                    Query_7591   181  GTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACCCCGC  270
V  96.9% (282/291)  IGHV5-51*01  186  .......C...................A.C.......................................................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  D  S  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_7591   271  CATGTATTACTGTGCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  96.9% (282/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------........A.....-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------.......AC.....T.............................  49

                                                   
                                        T  V  S  S 
                    Query_7591   361  CACCGTCTCCTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_165286

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           285     4e-79
IGHD4-4*01                                                                                            14.1    8.5  
IGHJ2*01                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-4*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACAGTTTTTCCCCCCCGTCG	GACTACA	T	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATAACAGTTTTTCCCCCCCGTCGGACTACATCTTCGACCTC	VRDNSFSPPSDYIFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	216	34	0	86.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  K  N  Y  N  M  N  W  V  R  Q  A  P  G  K  R  L  
                    Query_7592   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAAGAACTACAACATGAACTGGGTCCGCCAGGCTCCAGGGAAGCGCCTGG  90
V  86.4% (216/250)  IGHV3-21*01  47   ....................G.....................GT.G...T.G...............................G.G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  G  R  N  N  D  I  H  Y  A  D  S  M  K  G  R  I  T  I  S  R  D  N  A  
                    Query_7592   91   AGTGGGTCTCATCGATTAGAGGTAGAAACAATGACATCCACTACGCAGACTCAATGAAGGGCCGAATCACCATCTCCAGAGACAACGCCA  180
V  86.4% (216/250)  IGHV3-21*01  137  .............C.....TA....T.GT.G.T....AT..............G...........T........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  N  S  L  Y  L  H  M  H  S  L  G  A  E  D  T  A  I  Y  F  C  V  R  D  N  S  F  S  P  P  
                    Query_7592   181  ACAATTCACTCTATCTCCACATGCACAGCCTGGGAGCCGAGGACACGGCGATCTATTTCTGCGTCAGAGATAACAGTTTTTCCCCCCCGT  270
V  86.4% (216/250)  IGHV3-21*01  227  .G..C.....G.....G..A...A........A................TG.G....A...T.CG.....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      T------------------>                                  
                                      S  D  Y  I  F  D  L  W  G  R  G  T  P  V  S  V  S  S  
                    Query_7592   271  CGGACTACATCTTCGACCTCTGGGGCCGTGGCACCCCAGTCTCTGTCTCCTCAG  324
D  100.0% (7/7)     IGHD4-4*01   2    --.......---------------------------------------------  8
J  90.9% (40/44)    IGHJ2*01     10   ----------......T...................TG...A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_165285

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-19*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCG	GCAGTGGCTGGTAC	GGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCGGCAGTGGCTGGTACGGGATTGACTAC	AKDRGSGWYGIDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_7593   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGCTGGATCCGGCAGACCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   .............................................T.......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_7593   91   TGGATTGGGTATATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ....................C...................................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  D  R  G  S  G  W  Y  G  I 
                    Query_7593   181  CAGTTCTCCCTGAGGCTGAACTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAAAGATCGCGGCAGTGGCTGGTACGGGATT  270
V  96.7% (237/245)  IGHV4-59*01  229  .............A.....G...........................G.............G...-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (14/14)   IGHD6-19*01  8    ----------------------------------------------------------------------..............------  21
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_7593   271  GACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  310
J  97.6% (41/42)    IGHJ4*02     9    ...................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_165284

Length=410
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     2e-124
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGCCTACTTTCTTAGTTGGGGTTACTCTGGTA	GTATAACAGCAGCTGG	CGAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTAC	ARHAYFLSWGYSGSITAAGEIDY	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	285	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  A  T  Y
                    Query_7594   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTGCCACCTA  90
V  97.9% (285/291)  IGHV5-51*01  6    ....................................C........................................G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_7594   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  97.9% (285/291)  IGHV5-51*01  96   ............................................................................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_7594   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  97.9% (285/291)  IGHV5-51*01  186  .........................................................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        M  Y  Y  C  A  R  H  A  Y  F  L  S  W  G  Y  S  G  S  I  T  A  A  G  E  I  D  Y  W  G  Q
                    Query_7594   271  CATGTATTACTGTGCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTACTGGGGCCA  360
V  97.9% (285/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  93.8% (15/16)    IGHD6-13*01  3    -----------------------------------------------------.....G..........---------------------  18
J  100.0% (42/42)   IGHJ4*02     7    --------------------------------------------------------------------------................  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_7594   361  GGGAACCCTGGTCACCGTCTCCTCAG  386
J  100.0% (42/42)   IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40183344


Query= Query_178270

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            319     2e-89
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTAGTAACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTAGTAACACCTGGTACTCGGGGTTTTGATTCC	AGHLVTPGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	225	21	0	91.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_7595   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  91.5% (225/246)  IGHV4-4*01   49   ........................................G..GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  A  E  I  H  H  G  G  P  T  N  Y  N  P  A  L  E  S  R  V  T  I  S  V  D  K  S  N 
                    Query_7595   91   GAGTGGATAGCGGAAATCCATCATGGTGGACCCACCAACTACAACCCGGCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAC  180
V  91.5% (225/246)  IGHV4-4*01   139  ........T.G.......T.....A....GAG................T.....A..................................G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  S  L  S  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_7595   181  AACCAATTCTCCCTGAGCCTGAGCTCTCTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATCTAGTAACACCTGGTACTCGG  270
V  91.5% (225/246)  IGHV4-4*01   229  .....G..........AG.........G...........................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7595   271  GGTTTTGATTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.3% (41/43)    IGHJ4*02     6    ---.....C.A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_208478

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            315     5e-88
IGHD2-15*01                                                                                           12.2    32   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	GTGGTA	CTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACGTGGTACTCGGGGTTTTGACTAC	ARHLGTRGTRGFDY	245	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	34	20	19	1	0	95
CDR1-IMGT	35	58	27	22	2	3	81.5
FR2-IMGT	59	109	51	50	1	0	98
CDR2-IMGT	110	130	21	19	2	0	90.5
FR3-IMGT	131	244	114	106	8	0	93
CDR3-IMGT (germline)	245	250	6	6	0	0	100
Total	N/A	N/A	239	222	14	3	92.9


Alignments

                                      <-----FR1-IMGT-----><--------CDR1-IMGT--------><--------------------FR2-IMGT--------------
                                         L  A  C  A  V  S  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  L  E  W  
                    Query_7596   15   CCCTCGCCTGCGCTGTCTCTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTGGAGTGGA  101
V  92.9% (222/239)  IGHV4-4*02   56   .....A..................G.....T........GTA.......................C........................  145
                                         L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L  E  W  

                                      -------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IMGT
                                      I  G  E  T  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  I  I  S  L  D  T  S  K  N  Q  
                    Query_7596   102  TTGGGGAAACCTATCACAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCACTAGACACGTCCAAGAATCAGT  191
V  92.9% (222/239)  IGHV4-4*02   146  .........T......T...........................................C.......G......A.........C....  235
                                      I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N  Q  

                                      ----------------------------------------------------><----------------CDR3-IMGT-----------
                                      F  S  L  N  P  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  R  G  T  R  G  F  
                    Query_7596   192  TCTCCCTGAATCCCAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACGTGGTACTCGGGGTTTTG  281
V  92.9% (222/239)  IGHV4-4*02   236  ..........G.TG.G...........................................-------------------------------  294
                                      F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                                
D  100.0% (6/6)     IGHD2-15*01  15   ------------------------------------------------------------------------......------------  20
J  97.7% (42/43)    IGHJ4*02     6    --------------------------------------------------------------------------------------....  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_7596   282  ACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  320
J  97.7% (42/43)    IGHJ4*02     10   .....................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_208474

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           364     5e-103
IGHD3-10*01                                                                                           14.1    8.1   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTA	GGG	CGGGGAG	AGGGGG	CTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGGGCGGGGAGAGGGGGCTTGGACTAC	RAGRGGLDY	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	249	1	1	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_7597   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  96.8% (241/249)  IGHV3-73*01  47   .........A................................................................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  H  I  R  S  I  S  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_7597   91   AGTGGGTTGGCCATATTAGAAGCATCTCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATG  180
V  96.8% (241/249)  IGHV3-73*01  137  ............G...........AAG...............................................................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  E  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  R  A  G  R  G  G  L  
                    Query_7597   181  ATTCAGAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTCTATTATTGTAGGGCGGGGAGAGGGGGCTTGG  270
V  96.8% (241/249)  IGHV3-73*01  227  .....A....................................................G.....C....---------------------  295
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  100.0% (7/7)     IGHD3-10*01  15   ------------------------------------------------------------------------.......-----------  21
J  97.7% (43/44)    IGHJ4*02     5    -------------------------------------------------------------------------------------...T.  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7597   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.7% (43/44)    IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_208475

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*13                                                                                           385     4e-109
IGHD1-26*01                                                                                           10.3    132   
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*13	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACGG	GTTCTTTCCAGCACT	TGGGA	CGGC	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGGTTCTTTCCAGCACTTGGGACGGCTACTATCACTACTACGGTATGGACGTC	ARVLSSTWDGYYHYYGMDV	263	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	108	6	0	94.7
CDR3-IMGT (germline)	263	268	6	6	0	0	100
Total	N/A	N/A	268	257	11	0	95.9


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  C  V  S  W  V  R
                    Query_7598   1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTCTGTGTGAGCTGGGTCCG  90
V  95.9% (257/268)  IGHV2-70*13  30   ......................................................................A.G............A....  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  T  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T
                    Query_7598   91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACTCATTACTTGGGATGATGATAAATACTACAGCACATCTCTGAAGACCAGGCTCAC  180
V  95.9% (257/268)  IGHV2-70*13  120  ........................................GA................................................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  K  D  T  S  K  N  Q  V  A  L  T  L  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  V
                    Query_7598   181  CATCTCCAAGGACACCTCAAAAAACCAGGTGGCCCTCACACTGACCAACATGGACCCTGTGGACACAGCCACCTACTATTGTGCACGGGT  270
V  95.9% (257/268)  IGHV2-70*13  210  ..................C.............T...T...A...............................G..T............--  297
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                      ----------------CDR3-IMGT----------------------->                                 
                                        L  S  S  T  W  D  G  Y  Y  H  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7598   271  TCTTTCCAGCACTTGGGACGGCTACTATCACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  352
D  100.0% (5/5)     IGHD1-26*01  8    -------------.....----------------------------------------------------------------  12
J  96.7% (58/60)    IGHJ6*02     3    ----------------------.....CT.....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_164782

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            347     7e-98
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAAGGGAGA	TGACTACGGT	CAGGGTCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAAAAGGGAGATGACTACGGTCAGGGTCCTTTTGACTTC	AREKGDDYGQGPFDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7599   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  94.4% (236/250)  IGHV3-9*01   47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  W  N  S  N  G  V  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7599   91   AGTGGGTCTCAAGTATTAGTTGGAATAGTAATGGTGTTGACTATGCGGACTCTGTGAAGGGCCGATTTACCATCTCCAGAGACAATGCCA  180
V  94.4% (236/250)  IGHV3-9*01   137  ...........G.................GG.A.CA.A.G...........................C.................C....  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  F  Y  Y  C  A  R  E  K  G  D  D  Y  G  
                    Query_7599   181  AGAACTCCCTGTTTTTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTCTATTACTGTGCAAGAGAAAAGGGAGATGACTACGGTC  270
V  94.4% (236/250)  IGHV3-9*01   227  ............A.C.....................................G.............A...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD4-17*01  1    -------------------------------------------------------------------------------..........-  10

                                      ---------------->                                  
                                      Q  G  P  F  D  F  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_7599   271  AGGGTCCTTTTGACTTCTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  321
J  95.3% (41/43)    IGHJ4*02     6    --------.......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_208477

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         325     3e-91
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	N/A	N/A	TCACCTGCCAACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGATCACCTGCCAACCCCTACTACCACGCTCTGGACGTC	ARSPANPYYHALDV	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  T  V  S  G  V  Y  I  S  N  G  G  Y  S  W  T  W  I  R  Q  P  P  G  R  G  
                    Query_7600     4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGTCTACATCAGCAATGGTGGTTACTCCTGGACCTGGATCCGGCAGCCACCAGGGAGGGGCC  93
V  91.9% (228/248)  IGHV4-30-2*01  50   .....TCC...A.....G............G..C........G.................G.......................A.....  139
                                           L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  Q  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  R  S  
                    Query_7600     94   TGGAGTGGATTGGGTACATCTATCAAAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGCGTCACCATATCGGTAGACAGGTCCA  183
V  91.9% (228/248)  IGHV4-30-2*01  140  .........................T...............................A......A...........A.............  229
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  

                                        -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                        K  N  Q  F  S  V  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  A  N  P  Y  Y  
                    Query_7600     184  AGAACCAGTTCTCCGTTAACTTGAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGATCACCTGCCAACCCCTACTACC  273
V  91.9% (228/248)  IGHV4-30-2*01  230  ..............C.G..GC....C..........................G...............----------------------  297
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
J  92.7% (51/55)    IGHJ6*02       8    ----------------------------------------------------------------------------------.......T  15

                                        ------------->                                 
                                        H  A  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7600     274  ACGCTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  320
J  92.7% (51/55)    IGHJ6*02       16   ...G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_208473

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           300     8e-84
IGHD3-16*01                                                                                           14.1    8.5  
IGHJ1*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GATGGCGGGTTCTATGAAGTTGG	TGCTTAT	TCTCCAC	AATAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGATGGCGGGTTCTATGAAGTTGGTGCTTATTCTCCACAATACTTCCACCAC	ADGGFYEVGAYSPQYFHH	237	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	11	1	0	91.7
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	17	7	0	70.8
FR3-IMGT	123	236	114	110	4	0	96.5
CDR3-IMGT (germline)	237	239	3	3	0	0	100
Total	N/A	N/A	228	210	18	0	92.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  G  S  G  F  T  F  T  R  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 
                    Query_7601   12   TGTGCAGGCTCTGGATTCACCTTTACCAGATATGGCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGACTGGAGTGGGTCTCAGGTATT  101
V  92.1% (210/228)  IGHV3-23*01  64   .......C.................G...C....C......C..........................G................C....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       T  T  S  G  D  I  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_7601   102  ACTACTAGTGGTGACATTACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGTTGTATCTG  191
V  92.1% (210/228)  IGHV3-23*01  154  .G.GG........GT.GC...............................................................C........  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><----------------------CDR3-IMGT-------------
                                       Q  M  N  S  L  R  A  E  D  S  A  I  Y  Y  C  A  D  G  G  F  Y  E  V  G  A  Y  S  P  Q  Y 
                    Query_7601   192  CAAATGAACAGCCTGAGAGCCGAAGACTCGGCCATATATTACTGTGCGGATGGCGGGTTCTATGAAGTTGGTGCTTATTCTCCACAATAC  281
V  92.1% (210/228)  IGHV3-23*01  244  .......................G...A.....G..............------------------------------------------  291
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  100.0% (7/7)     IGHD3-16*01  28   -----------------------------------------------------------------------.......------------  34
J  97.9% (47/48)    IGHJ1*01     5    -------------------------------------------------------------------------------------.....  9

                                      -------->                                  
                                       F  H  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7601   282  TTCCACCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  324
J  97.9% (47/48)    IGHJ1*01     10   .....G.....................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_77984

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_7602   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7602   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_7602   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7602   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_77987

Length=420
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           366     2e-103
IGHD2-21*02                                                                                           14.1    10    
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGCAC	TGTAGTGCTGACT	AATAGGCGCGGACTTACGGGGCCAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCGCACTGTAGTGCTGACTAATAGGCGCGGACTTACGGGGCCAGACTACCACTACTACGGCATGGACGTC	ARERTVVLTNRRGLTGPDYHYYGMDV	284	361	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	262	28	0	90.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  T  A  S  G  Y  T  F  S  S  Y 
                    Query_7603   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCACGGCCTCTGGGTACACCTTTAGCAGTTAT  91
V  90.3% (262/290)  IGHV1-18*01  7    .................................................A...........A...T.....T..........C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  K  N  G  D  T  K  Y  E  Q 
                    Query_7603   92   AGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCCAAGAACGGAGACACCAAATATGAGCAG  181
V  90.3% (262/290)  IGHV1-18*01  97   G.......C.....................................................TT.C..T..TA....A..C....CA...  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  D  R  I  F  L  T  T  E  T  S  T  S  T  A  Y  M  E  V  T  S  L  R  S  D  D  T  A 
                    Query_7603   182  AAGTTCCAGGACAGAATCTTCCTGACCACAGAGACATCCACGAGCACAGCCTACATGGAGGTGACGAGCCTGAGATCTGACGACACGGCC  271
V  90.3% (262/290)  IGHV1-18*01  187  ...C......G....G..AC.A..........C...........................C...G.........................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------------------CDR3-IMGT--------------------------------->
                                       V  Y  Y  C  A  R  E  R  T  V  V  L  T  N  R  R  G  L  T  G  P  D  Y  H  Y  Y  G  M  D  V 
                    Query_7603   272  GTCTATTACTGTGCGAGAGAGCGCACTGTAGTGCTGACTAATAGGCGCGGACTTACGGGGCCAGACTACCACTACTACGGCATGGACGTC  361
V  90.3% (262/290)  IGHV1-18*01  277  ..G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  84.6% (11/13)    IGHD2-21*02  8    --------------------------...G...G.....---------------------------------------------------  20
J  94.9% (56/59)    IGHJ6*02     4    ----------------------------------------------------------------.....T..........T.........  29

                                                                       
                                       W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7603   362  TGGGGCCAAGGGACCACTGTCACCGTCTCCTCA  394
J  94.9% (56/59)    IGHJ6*02     30   .................G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41235264


Query= Query_77986

Length=407
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           371     8e-105
IGHD4-17*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GGTCATC	GACTACGGTGACTAC	GTCG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGAGGTCATCGACTACGGTGACTACGTCGACTTCTACTATTACGGAATGGACGTC	ATEVIDYGDYVDFYYYGMDV	290	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	63	7	0	90
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	175	30	25	5	0	83.3
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	297	8	7	1	0	87.5
Total	N/A	N/A	297	267	30	0	89.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  K  P  G  E  S  L  R  V  S  C  A  A  S  G  L  S  F  K  N  A
                    Query_7604   1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGGTTAAGCCTGGAGAGTCCCTCAGAGTCTCCTGTGCAGCCTCTGGACTCAGCTTCAAAAACGC  90
V  89.9% (267/297)  IGHV3-15*01  6    ..........G.......G...........A........G.G......T...C....................T...CT....GT.....  95
                                        Q  L  V  E  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A

                                      ---><--------------------FR2-IMGT---------------------><----------CDR2-IMGT---------><----
                                        W  M  T  W  V  R  Q  S  P  G  K  G  L  E  W  V  G  R  I  R  S  R  T  D  G  G  T  A  D  Y
                    Query_7604   91   CTGGATGACCTGGGTCCGCCAGTCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGCATTAGAAGCAGAACCGATGGTGGGACGGCAGACTA  180
V  89.9% (267/297)  IGHV3-15*01  96   ........G.............G...............................T....A.....A...T...........AA.......  185
                                        W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y

                                      ------------------------------------------------FR3-IMGT----------------------------------
                                        A  A  P  V  K  G  R  F  I  I  S  R  D  E  S  K  T  T  L  Y  L  Q  M  N  S  L  K  T  E  D
                    Query_7604   181  CGCTGCACCCGTGAAAGGCAGATTCATCATCTCAAGAGATGAATCGAAGACCACCCTTTATCTTCAAATGAACAGCCTGAAAACCGAGGA  270
V  89.9% (267/297)  IGHV3-15*01  186  ..........................C...............T..A..A.A...G..G.....G..........................  275
                                        A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D

                                      ------------------><-------------------------CDR3-IMGT------------------------>           
                                        T  A  V  Y  Y  C  A  T  E  V  I  D  Y  G  D  Y  V  D  F  Y  Y  Y  G  M  D  V  W  G  Q  G
                    Query_7604   271  CACAGCCGTCTATTACTGTGCCACAGAGGTCATCGACTACGGTGACTACGTCGACTTCTACTATTACGGAATGGACGTCTGGGGCCAAGG  360
V  89.9% (267/297)  IGHV3-15*01  276  .........G.........A.......---------------------------------------------------------------  302
                                        T  A  V  Y  Y  C  T  T                                                                  
D  100.0% (15/15)   IGHD4-17*01  2    ----------------------------------...............-----------------------------------------  16
J  89.8% (53/59)    IGHJ6*02     4    -----------------------------------------------------...A......C.....T....................  40

                                                            
                                        S  S  V  T  V  S  S 
                    Query_7604   361  GAGTTCGGTCACCGTCTCCTCA  382
J  89.8% (53/59)    IGHJ6*02     41   ..CCA.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39867768


Query= Query_77981

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         332     3e-93
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGTCAA	TACTATGCTATTAGTGCTTATT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGTCAATACTATGCTATTAGTGCTTATTACTACTTTGACCAC	ARGQYYAISAYYYFDH	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  D  V  S  G  G  S  I  S  S  G  G  Y  Y  W  N  W  I  R  Q  T  P  G  K  G 
                    Query_7605     1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAATTGGATTCGACAGACCCCAGGGAAGGGC  90
V  92.7% (230/248)  IGHV4-30-4*01  49   ..................AC.............................A...........G......C..C...C..............  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  S  V  Y  Y  S  G  R  T  Y  D  S  P  S  L  K  S  R  V  T  L  S  V  D  T  S 
                    Query_7605     91   CTGGAGTGGATTGGGTCCGTCTATTACAGTGGGCGCACCTATGACAGCCCGTCCCTCAAGAGTCGAGTTACCTTATCAGTCGACACGTCC  180
V  92.7% (230/248)  IGHV4-30-4*01  139  ................A.A..............A.......CT...A.........................A.......A.........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                         K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  Q  Y  Y  A  I  S 
                    Query_7605     181  AAGAACCAGTTCTCCCTGAGGTTGAGCTCTGTGACTGCCGCAGACACGGCCGTCTATTACTGTGCCAGGGGTCAATACTATGCTATTAGT  270
V  92.7% (230/248)  IGHV4-30-4*01  229  ...................A.C...............................G..............----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  86.4% (19/22)    IGHD3-22*01    5    ---------------------------------------------------------------------------.......A..G....  19

                                        GT------------------>                                  
                                         A  Y  Y  Y  F  D  H  W  G  R  G  I  L  V  T  V  T  S  
                    Query_7605     271  GCTTATTACTACTTTGACCACTGGGGCCGGGGAATCCTGGTCACCGTCACGTCAG  325
D  86.4% (19/22)    IGHD3-22*01    20   .G.....------------------------------------------------  26
J  89.6% (43/48)    IGHJ4*02       1    -------...........T.........A.....C.............T.C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_77983

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         371     7e-105
IGHD3-22*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-22*01	IGHJ4*02	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTACTGGATGGCTCGTCCAAGGAGATACTATAGC	AGTAGTGGTT	GGGCCAGGACCTTGAGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATCTTACTGGATGGCTCGTCCAAGGAGATACTATAGCAGTAGTGGTTGGGCCAGGACCTTGAGAATGACTAC	ARDLTGWLVQGDTIAVVVGPGP*E*L	244	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  A  P  G  K  G 
                    Query_7606     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTATTCCTGGAGCTGGATCCGGCAGGCACCAGGGAAGGGC  90
V  97.2% (244/251)  IGHV4-30-2*01  49   .....................................................C.....................C..............  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  N  I  Y  H  S  G  S  T  Y  Y  Y  P  S  L  K  S  R  V  T  I  S  V  D  R  S 
                    Query_7606     91   CTGGAGTGGATTGGGAACATCTATCATAGTGGGAGCACGTATTACTACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCC  180
V  97.2% (244/251)  IGHV4-30-2*01  139  ...............T......................C..C...A............................................  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------------
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  T  G  W  L  V 
                    Query_7606     181  AAGAACCAGTTCTCCCTGAAGCTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGATCTTACTGGATGGCTCGTC  270
V  97.2% (244/251)  IGHV4-30-2*01  229  ..........................C............................................-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                        --------CDR3-IMGT---------------------------------->                                  
                                         Q  G  D  T  I  A  V  V  V  G  P  G  P  *  E  *  L  L  G  P  G  N  P  G  H  R  L  L   
                    Query_7606     271  CAAGGAGATACTATAGCAGTAGTGGTTGGGCCAGGACCTTGAGAATGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  356
D  100.0% (10/10)   IGHD3-22*01    14   -----------------..........-----------------------------------------------------------  23
J  97.6% (40/41)    IGHJ4*02       8    ---------------------------------------------....................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_77982

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_7607   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_7607   91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_7607   181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_7607   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_127043

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           363     1e-102
IGHD3-10*01                                                                                           12.2    32    
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTACCTGGAGCACT	TGGTTC	CGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACCTGGAGCACTTGGTTCCGGACTACGGTATGGACGTC	ARDYLEHLVPDYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7608   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCCGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-33*01  47   ............................T................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  Y  D  G  S  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7608   91   AGTGGGTGGCACTTATATGGTATGATGGAAGTAAAAAGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCTA  180
V  96.4% (241/250)  IGHV3-33*01  137  ...........G......................T..A..................................................C.  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  L  E  H  L  V  
                    Query_7608   181  AGAATACGGTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATTACCTGGAGCACTTGGTTC  270
V  96.4% (241/250)  IGHV3-33*01  227  ....C...C...........................................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01  10   ------------------------------------------------------------------------------------......  15

                                      T------------------>                                 
                                      P  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7608   271  CGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  323
J  98.0% (49/50)    IGHJ6*02     13   ---..............................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_127042

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         388     5e-110
IGHD6-19*01                                                                                           18.0    0.64  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	CCACGGCTAC	AGCAGTGGC	GC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGCCACGGCTACAGCAGTGGCGCTGACTAC	GSHGYSSGADY	289	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	75	72	70	2	0	97.2
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	102	12	0	89.5
CDR3-IMGT (germline)	289	293	5	4	1	0	80
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  V  S  E  F  S  F  T  N 
                    Query_7609     4    GTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGTTTCTGAATTCAGCTTTACCAAC  93
V  92.8% (269/290)  IGHV5-10-1*01  4    ..G................................................................G.....G..A...........G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         F  W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  D  Y  S 
                    Query_7609     94   TTCTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAGGATTGATCCTAGTGACTCTTATACCGACTACAGC  183
V  92.8% (269/290)  IGHV5-10-1*01  94   .A........G..........................................G...........................A........  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  S  Q  G  H  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  M  W  S  S  L  R  A  S  D  S 
                    Query_7609     184  CCGTCCTCCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCATCACAACTGCCTACCTAATGTGGAGCAGCCTGCGGGCCTCGGACAGC  273
V  92.8% (269/290)  IGHV5-10-1*01  184  .......T......................................GC...........GCA.............AA...........C.  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><-----------CDR3-IMGT----------->                                  
                                         A  I  Y  Y  C  G  S  H  G  Y  S  S  G  A  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_7609     274  GCCATTTATTATTGTGGGAGCCACGGCTACAGCAGTGGCGCTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  355
V  92.8% (269/290)  IGHV5-10-1*01  274  .....G.....C....C...--------------------------------------------------------------  293
                                         A  M  Y  Y  C  A                                                                 
D  100.0% (9/9)     IGHD6-19*01    7    ------------------------------.........-------------------------------------------  15
J  97.6% (40/41)    IGHJ4*02       8    -----------------------------------------..............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_127040

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           363     1e-102
IGHD3-10*01                                                                                           10.3    124   
IGHJ2*01                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CG	GGTTC	CATCTGTCCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGACGGGTTCCATCTGTCCCCCTACTGGTACTTCGATCTC	ARDGFHLSPYWYFDL	249	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	256	8	5	3	0	62.5
Total	N/A	N/A	256	244	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7610   1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCACCTTTGGTGATTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  95.3% (244/256)  IGHV3-49*04  47   .........................T..........................T................................G....  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  T  Y  G  G  T  A  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_7610   91   AGTGGGTAGGTTTCATTAGAAGCAAGACTTATGGTGGGACAGCAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  95.3% (244/256)  IGHV3-49*04  137  .........................AG..............A................................................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------------CDR3
                                      D  S  K  S  I  A  F  L  R  M  D  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  D  G  F  H  L  
                    Query_7610   181  ATTCCAAAAGCATCGCCTTTCTGCGAATGGACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTGCCAGGGACGGGTTCCATCTGT  270
V  95.3% (244/256)  IGHV3-49*04  227  ..................A.....A....A......................................A.T..A..--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (5/5)     IGHD3-10*01  11   ------------------------------------------------------------------------------.....-------  15

                                      -IMGT----------------->                                  
                                      S  P  Y  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_7610   271  CCCCCTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCCTCAG  327
J  98.1% (52/53)    IGHJ2*01     1    ----........................................A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_77989

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            372     2e-105
IGHD3-10*01                                                                                           39.1    3e-07 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TTTCGG	ATTACTATGGTTCGGGGACTTAT	CAGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATATTTCGGATTACTATGGTTCGGGGACTTATCAGAACTACTTTGACTAC	AKDISDYYGSGTYQNYFDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	252	10	10	0	0	100
Total	N/A	N/A	252	245	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  H  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7611   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATCATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  97.2% (245/252)  IGHV3-9*01   47   ...............................................T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  S  W  N  S  D  S  I  G  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7611   91   AGTGGGTCGCAGGTATTAGTTGGAATAGTGACAGTATCGGCTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (245/252)  IGHV3-9*01   137  ........T.....................GT..C..A.......C............................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  I  S  D  Y  Y  G  
                    Query_7611   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATATTTCGGATTACTATGGTT  270
V  97.2% (245/252)  IGHV3-9*01   227  ........................................................................------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  95.7% (22/23)    IGHD3-10*01  3    ------------------------------------------------------------------------------............  14

                                      -IMGT----------------------->                                  
                                      S  G  T  Y  Q  N  Y  F  D  Y  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_7611   271  CGGGGACTTATCAGAACTACTTTGACTACTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  333
D  95.7% (22/23)    IGHD3-10*01  15   ......G....----------------------------------------------------  25
J  97.9% (47/48)    IGHJ4*02     1    ---------------..............................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_77988

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD6-19*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCG	GCAGTGGCTGGTAC	GGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCGGCAGTGGCTGGTACGGGATTGACTAC	AKDRGSGWYGIDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  *  I  R  Q  T  P  G  K  G  L  E 
                    Query_7612   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGCTGAATCCGGCAGACCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   .............................................T.............G.........C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_7612   91   TGGATTGGGTATATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  ....................C...................................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  D  R  G  S  G  W  Y  G  I 
                    Query_7612   181  CAGTTCTCCCTGAGGCTGAACTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAAAGATCGCGGCAGTGGCTGGTACGGGATT  270
V  96.3% (236/245)  IGHV4-59*01  229  .............A.....G...........................G.............G...-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (14/14)   IGHD6-19*01  8    ----------------------------------------------------------------------..............------  21
J  95.2% (40/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  I  L  V  T  A  S  S  
                    Query_7612   271  GACTACTGGGGCCAGGGAATCCTGGTCACCGCCTCCTCAG  310
J  95.2% (40/42)    IGHJ4*02     9    ...................C...........T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_46600

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            352     3e-99
IGHD6-19*01                                                                                           21.8    0.039
IGHJ4*01                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	N/A	GCAGTGGCTGG	CTGTCGGAGTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ATGGGAGGCAGTGGCTGGCTGTCGGAGTTC	MGGSGWLSEF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	4	3	0	57.1
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  S  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7613   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACCTTTAATTCCTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-7*01   47   ...............................A..........G.AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  H  Q  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7613   91   AGTGGGTGGCCAACATACACCAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (237/249)  IGHV3-7*01   137  .................A.G..................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  M  G  G  S  G  W  L  S  E  
                    Query_7613   181  AGAACTCACTGTATCTGCAAATGAACACCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTATGGGAGGCAGTGGCTGGCTGTCGGAGT  270
V  95.2% (237/249)  IGHV3-7*01   227  ...........................G..................................GC.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-19*01  8    ---------------------------------------------------------------------...........----------  18

                                      ->                                  
                                      F  W  G  H  G  T  L  V  T  V  S  S  
                    Query_7613   271  TCTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.1% (34/35)    IGHJ4*01     14   -.........A.........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_272413

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           391     6e-111
IGHD6-19*01                                                                                           16.1    2.6   
IGHJ5*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAGACGGGGTGTGTCT	GTGGCTGG	CTCGCCGGGT	AACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAGACGGGGTGTGTCTGTGGCTGGCTCGCCGGGTAACTCGTTCGACCCC	ARDRRGVSVAGSPGNSFDP	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_7614   2    CAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGTTAC  91
V  93.1% (270/290)  IGHV1-18*04  7    ...................C.............................A....................................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  A  T  N  Y  A  Q 
                    Query_7614   92   GGTATCAACTGGGTGCGCCAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCCCTTATAATGGTGCCACAAACTATGCACAG  181
V  93.1% (270/290)  IGHV1-18*04  97   .......G.........A.................G........................G....C......AA................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  F  Q  D  R  V  T  M  T  T  D  T  S  T  N  S  A  S  M  D  L  R  S  L  T  S  D  D  T  A 
                    Query_7614   182  AACTTCCAGGACAGAGTCACCATGACCACAGACACATCCACCAACTCAGCCTCCATGGACCTGAGGAGCCTGACATCTGACGACACGGCC  271
V  93.1% (270/290)  IGHV1-18*04  187  ..GC......G..............................G.G.A......A......G.............G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  A  R  D  R  R  G  V  S  V  A  G  S  P  G  N  S  F  D  P  W  G  Q  G  T  L  V 
                    Query_7614   272  GTCTATTACTGTGCGAGAGACAGACGGGGTGTGTCTGTGGCTGGCTCGCCGGGTAACTCGTTCGACCCCTGGGGCCAGGGAACCCTGGTC  361
V  93.1% (270/290)  IGHV1-18*04  277  ..G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (8/8)     IGHD6-19*01  11   ------------------------------------........----------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------------------------------------------------------....G...............................  38

                                                   
                                       T  V  S  S  
                    Query_7614   362  ACCGTCTCCTCAG  374
J  98.0% (48/49)    IGHJ5*02     39   .............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_272412

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           344     6e-97
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGTTGGGCAA	CAGTGGCTGGTAC	GGAGT	CTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGTTGGGCAACAGTGGCTGGTACGGAGTCTTTAACTTC	ARDGLGNSGWYGVFNF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_7615   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTTTAATATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-30*04  47   ................................................A.GC...................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  Y  D  G  S  N  G  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7615   91   AGTGGTTGGCAGTTATATCATATGATGGAAGTAATGGACACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-30*04  137  .....G.............................AA.T...................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  G  T  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  R  D  G  L  G  N  S  G  
                    Query_7615   181  AGGGCACCCTGTATCTGGAAATGAACAGTCTGAGAGTTGAGGACACGGCTGTGTATTTCTGTGCGAGAGATGGGTTGGGCAACAGTGGCT  270
V  94.0% (235/250)  IGHV3-30*04  227  ..AA...G.........C..........C.......C....................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD6-19*01  9    ----------------------------------------------------------------------------------........  16

                                      T------------------>                                  
                                      W  Y  G  V  F  N  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7615   271  GGTACGGAGTCTTTAACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (13/13)   IGHD6-19*01  17   .....-------------------------------------------------  21
J  95.5% (42/44)    IGHJ4*02     5    ----------....G...A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_272410

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           400     9e-114
IGHD3-22*01                                                                                           23.8    0.012 
IGHJ2*01                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAT	TATTTCCATGATAGTCGTGGT	G	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCATTATTTCCATGATAGTCGTGGTGACTGGTACTTCGATCTC	ARDHYFHDSRGDWYFDL	281	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	166	21	15	6	0	71.4
FR3-IMGT	167	280	114	108	6	0	94.7
CDR3-IMGT (germline)	281	288	8	8	0	0	100
Total	N/A	N/A	288	272	16	0	94.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  R  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  H  N
                    Query_7616   1    GCAGCTGGTGCAGTCTGGAGGACGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTCACAA  90
V  94.4% (272/288)  IGHV3-53*01  6    ..........G...........G..............................................................AG...  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  H  R  D  G  K  T  D  Y  A  V  S
                    Query_7616   91   CTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTCATAGGGATGGAAAAACAGACTATGCAGTCTC  180
V  94.4% (272/288)  IGHV3-53*01  96   ..........................................................T....C.G...T.GC...T....C....A...  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V
                    Query_7616   181  CGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACTGTGTATCTTCAAATGAACAGCCTGCGAGCCGAGGACACGGCCGT  270
V  94.4% (272/288)  IGHV3-53*01  186  .............................................GC.......................A...................  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><--------------------CDR3-IMGT-------------------->                             
                                        Y  Y  C  A  R  D  H  Y  F  H  D  S  R  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S
                    Query_7616   271  GTATTACTGTGCGAGAGACCATTATTTCCATGATAGTCGTGGTGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTC  360
V  94.4% (272/288)  IGHV3-53*01  276  ..................------------------------------------------------------------------------  293
                                        Y  Y  C  A  R                                                                           
D  85.7% (18/21)    IGHD3-22*01  2    ----------------------....A.T........A.....-----------------------------------------------  22
J  100.0% (51/51)   IGHJ2*01     3    --------------------------------------------..............................................  48

                                           
                                        S  
                    Query_7616   361  CTCAG  365
J  100.0% (51/51)   IGHJ2*01     49   .....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_272417

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_7617   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  91.0% (222/244)  IGHV4-59*01  50   .....TCC...A....C.............G........G.AG..A......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S  
                    Query_7617   94   GGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGCC  183
V  91.0% (222/244)  IGHV4-59*01  140  .......G......T..........G.GC.............................A.T......A...................A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F  
                    Query_7617   184  AGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACGCGGCCGTGTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTTG  273
V  91.0% (222/244)  IGHV4-59*01  230  ..................G...................A.........................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------------------------.......C.G..A..  15

                                      ------------------->                                  
                                      G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7617   274  GTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  83.3% (15/18)    IGHD5-18*01  16   ...---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    -----.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_272416

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           347     7e-98
IGHD3-10*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	T	TTCGGGG	CACGCGCGCGCGGTGGGACCTTCAAA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTCGGGGCACGCGCGCGCGGTGGGACCTTCAAATAC	ARDFGARARGGTFKY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7618   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-21*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7618   91   AGTGGGTCTCATCCATTAGTAGTACTTCCACTTATATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-21*01  137  ........................G.AGT.G...C.......................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  G  S  L  F  L  Q  M  T  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  G  A  R  A  R  
                    Query_7618   181  AGGGCTCGTTGTTTCTGCAAATGACCAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGATTTCGGGGCACGCGCGCGCG  270
V  94.4% (236/250)  IGHV3-21*01  227  ..AA...AC...A...........A...........................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-10*01  13   -----------------------------------------------------------------------.......------------  19

                                      ---------------->                                  
                                      G  G  T  F  K  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_7618   271  GTGGGACCTTCAAATACTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTCAG  321
J  97.3% (36/37)    IGHJ4*02     12   --------------................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_272414

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            380     1e-107
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              110     2e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGG	GTATAGCAGCTCG	ATCGTTA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTATAGCAGCTCGATCGTTATACTACTACTACGGTATGGACGTC	ARGGIAARSLYYYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	246	3	0	98.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  R  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7619  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTAGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (246/249)  IGHV3-7*01  47   .............................G............................................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  N  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7619  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACAATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.8% (246/249)  IGHV3-7*01  137  .........................................T................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  G  I  A  A  R  S  
                    Query_7619  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGGGTATAGCAGCTCGATCGT  270
V  98.8% (246/249)  IGHV3-7*01  227  ....................................C................................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD6-6*01  3    ------------------------------------------------------------------------.............-----  15

                                     IMGT--------------------->                                 
                                     L  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7619  271  TATACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  100.0% (57/57)   IGHJ6*02    6    --.........................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_272419

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           291     5e-81
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACG	TACGGTGAC	CCTACACTCCCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACGTACGGTGACCCTACACTCCCATACTTTGACTCT	ARTYGDPTLPYFDS	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	217	31	0	87.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  M  S  S  G  G  Y  L  W  S  W  V  R  Q  N  P  G  K  G 
                    Query_7620   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCTATGAGCAGTGGCGGCTATCTCTGGAGCTGGGTCCGCCAAAACCCAGGGAAGGGC  90
V  87.5% (217/248)  IGHV4-31*03  49   ...............................G...C..C........T..T..CTA..........A.......GC..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  T  S  Y  Y  S  P  S  L  K  R  R  L  T  I  S  V  G  T  S 
                    Query_7620   91   CTGGAGTGGATTGGGAGCATCTATTACAGTGGAACCTCCTACTACAGCCCGTCCCTCAAGAGGCGACTTACAATATCAGTAGGCACTTCT  180
V  87.5% (217/248)  IGHV4-31*03  139  ...............TA...............G.G.A.........A...............T...G....C..........A...G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       E  K  H  F  S  L  K  L  T  S  M  T  A  A  D  T  A  I  Y  F  C  A  R  T  Y  G  D  P  T  L 
                    Query_7620   181  GAGAAGCACTTCTCCCTGAAGCTGACCTCTATGACTGCCGCGGACACGGCCATATATTTTTGTGCGAGGACGTACGGTGACCCTACACTC  270
V  87.5% (217/248)  IGHV4-31*03  229  A....C..G................G....G....................G.G....AC........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (9/9)     IGHD4-17*01  5    ------------------------------------------------------------------------.........---------  13

                                      -------------->                                  
                                       P  Y  F  D  S  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_7620   271  CCATACTTTGACTCTTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  319
J  93.5% (43/46)    IGHJ4*02     3    ---..........AC.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_223330

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD2-2*01                                                                                            14.1    9.5   
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATCGGAGTTCAT	CTATGCC	TCGGGCGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATCGGAGTTCATCTATGCCTCGGGCGGACTGGGTCGACCAC	ARYRSSSMPRADWVDH	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	275	13	0	95.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  I  S  Y 
                    Query_7621   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTTATCAGTTAT  91
V  95.5% (275/288)  IGHV1-18*01  7    ............................A....................................T................C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  T  Y  N  A  N  T  N  S  A  Q 
                    Query_7621   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCTACAATGCCAACACAAACTCTGCACAG  181
V  95.5% (275/288)  IGHV1-18*01  97   ..........................................................G.G.T.......GT..........A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  I  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_7621   182  AACCTCCAGGGCAGAATCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAACTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.5% (275/288)  IGHV1-18*01  187  ..G............G...........................................G..............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  Y  R  S  S  S  M  P  R  A  D  W  V  D  H  W  G  Q  G  T  L  V  T  V  S 
                    Query_7621   272  GTGTATTACTGTGCGAGATATCGGAGTTCATCTATGCCTCGGGCGGACTGGGTCGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  361
V  95.5% (275/288)  IGHV1-18*01  277  ..................------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (7/7)     IGHD2-2*01   25   -------------------------------.......----------------------------------------------------  31
J  95.8% (46/48)    IGHJ5*02     4    ----------------------------------------------.....T......C...............................  47

                                          
                                       S  
                    Query_7621   362  TCAG  365
J  95.8% (46/48)    IGHJ5*02     48   ....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_292281

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           360     1e-101
IGHD3-3*01                                                                                            33.4    1e-05 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCCATCTTGGCGG	TTACGCTTTTTGGCGTGGTTATT	CCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCCATCTTGGCGGTTACGCTTTTTGGCGTGGTTATTCCCTTGACTAC	ARDPHLGGYAFWRGYSLDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7622   1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCCCCAGGCAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-33*01  47   ....................G........................G...........................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  H  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_7622   91   AGTGGGTGGCTGTTATATGGTATGATGGAAGTAATAAATACCATGCAGACTCCGTGAAGGGCCGATTCACTGTCTCCAGAGACAATTCCA  180
V  96.0% (240/250)  IGHV3-33*01  137  ..........A..............................T............................CA..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  K  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  H  L  G  G  Y  
                    Query_7622   181  AGAAGACGTTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGAGATCCCCATCTTGGCGGTTACG  270
V  96.0% (240/250)  IGHV3-33*01  227  ....C...C.................................................C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.3% (21/23)    IGHD3-3*01   4    -------------------------------------------------------------------------------------.....  8

                                      -IMGT----------------------->                                  
                                      A  F  W  R  G  Y  S  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7622   271  CTTTTTGGCGTGGTTATTCCCTTGACTACTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  333
D  91.3% (21/23)    IGHD3-3*01   9    A.......A.........---------------------------------------------  26
J  97.6% (41/42)    IGHJ4*02     7    ---------------------............................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_292282

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_7623   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_7623   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_7623   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_7623   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_72008

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           285     4e-79
IGHD5-12*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD5-12*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TAAAACGAGCA	GGATATAGTGACTAC	AACGCGCAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAAACGAGCAGGATATAGTGACTACAACGCGCAGGACTAC	VKRAGYSDYNAQDY	237	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	47	4	0	92.2
CDR2-IMGT	99	122	24	21	3	0	87.5
FR3-IMGT	123	236	114	102	12	0	89.5
CDR3-IMGT (germline)	237	237	1	1	0	0	100
Total	N/A	N/A	226	204	22	0	90.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  R  S  Y  A  L  H  *  V  R  Q  P  P  G  K  G  L  A  W  V  A  V  I 
                    Query_7624   12   TGTGCAGCCTCTGGATTCACCTTTAGAAGTTATGCTTTGCACTGAGTCCGCCAGCCTCCAGGCAAGGGGCTGGCGTGGGTGGCAGTTATA  101
V  90.3% (204/226)  IGHV3-30*04  64   .......................C..T..C......A.......G.........G..................A................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  Y  D  G  V  T  K  H  Y  S  D  S  V  T  G  R  F  T  I  S  R  D  N  S  K  N  T  L  F  L 
                    Query_7624   102  TCATATGATGGAGTTACTAAACACTATTCAGACTCCGTGACGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTTTCTG  191
V  90.3% (204/226)  IGHV3-30*04  154  ............AG..A....T....CG............A............................................A....  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><----------------CDR3-IMGT--------------->   
                                       E  M  N  S  L  R  S  E  D  T  G  V  Y  Y  C  V  K  R  A  G  Y  S  D  Y  N  A  Q  D  Y  W 
                    Query_7624   192  GAAATGAACAGCCTGAGAAGTGAAGACACGGGTGTCTATTATTGTGTAAAACGAGCAGGATATAGTGACTACAACGCGCAGGACTACTGG  281
V  90.3% (204/226)  IGHV3-30*04  244  C.................GC...G.......C...G.....C....--------------------------------------------  289
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                                              
D  93.3% (14/15)    IGHD5-12*01  3    ---------------------------------------------------------..........G....------------------  17
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------.........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  P  
                    Query_7624   282  GGCCAGGGAACCCTGGTCACCGTCTCCCCAG  312
J  97.5% (39/40)    IGHJ4*02     18   ...........................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_103530

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           360     1e-101
IGHD2-21*01                                                                                           12.2    31    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGAACCCCG	TATTCC	CGTCGCCA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGATGAACCCCGTATTCCCGTCGCCAAC	VRDEPRIPVAN	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  T  V  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7625   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCACTGTTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-48*03  47   ....................................C.....G.AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  G  G  S  T  I  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_7625   91   AGTGGGTTTCATACATTAGTAGTGGTGGTTCTACCATATACTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-48*03  137  .......................A.....AG..........................A................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  E  P  R  I  P  V  
                    Query_7625   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGTGCGAGATGAACCCCGTATTCCCGTCG  270
V  96.0% (240/250)  IGHV3-48*03  227  ...............................................................C.A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*01  23   -------------------------------------------------------------------------------......-----  28

                                      ---->                                  
                                      A  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7625   271  CCAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (36/36)   IGHJ4*02     13   ---....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_292285

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           327     8e-92
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TGGACTTCAGTC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGACTTCAGTCCTTTGACTAC	ARDGLQSFDY	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	230	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  I  C  S  V  S  G  G  S  I  S  G  V  G  Y  L  W  S  W  I  R  Q  Q  P  G  K  G 
                    Query_7626   1    ACCCTGTCCCTCATCTGCTCTGTCTCTGGTGGCTCCATAAGTGGTGTTGGTTATCTCTGGAGCTGGATCCGCCAGCAGCCAGGGAAGGGC  90
V  91.6% (230/251)  IGHV4-31*03  49   .............C....A...................C..CA...G......CTA.....................C............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  H  T  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  E  T  S 
                    Query_7626   91   CTGGAGTGGATTGGGTACATCTTTCACACTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATTTCACTAGAGACGTCT  180
V  91.6% (230/251)  IGHV4-31*03  139  ......................A.T...G.............................A.........T.....A...G....C......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       K  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  L  Q  S  F  D 
                    Query_7626   181  AAAAACCAGTTCTCCCTGAGGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGGACTTCAGTCCTTTGAC  270
V  91.6% (230/251)  IGHV4-31*03  229  ..G................A.....G.............................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  100.0% (44/44)   IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7626   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (44/44)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_292286

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           375     3e-106
IGHD2-21*02                                                                                           10.3    132   
IGHJ1*01                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCTTTTCGCAGCCTCTCCTTTC	ACTGC	CT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTTTCGCAGCCTCTCCTTTCACTGCCTAC	AALFAASPFTAY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	263	23	0	92


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_7627   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  92.0% (263/286)  IGHV5-51*01  6    ..................................................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  G  R  Q  V  P  G  K  G  L  G  L  M  G  T  L  F  P  G  D  S  D  T  T  Y  S  P
                    Query_7627   91   CTGGATCGGCTGGGGGCGCCAGGTGCCCGGAAAAGGCCTGGGGTTGATGGGGACCCTCTTTCCTGGTGACTCTGATACCACATACAGTCC  180
V  92.0% (263/286)  IGHV5-51*01  96   ..............T.......A.......G..........A..G........T.A...A....................G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  L  S  A  D  R  S  V  S  T  S  Y  L  Q  W  S  T  L  G  A  S  G  T  A
                    Query_7627   181  GTCCTTCCAAGGCCAGGTCATCCTCTCCGCCGACAGGTCCGTCAGCACCTCCTACCTGCAGTGGAGCACCCTGGGGGCCTCGGGCACCGC  270
V  92.0% (263/286)  IGHV5-51*01  186  ....................C.A....A.......A....A........G..................G....AA........A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  A  L  F  A  A  S  P  F  T  A  Y  W  G  Q  G  T  L  F  T  V  S  S  
                    Query_7627   271  CGTGTATTACTGTGCGGCCCTTTTCGCAGCCTCTCCTTTCACTGCCTACTGGGGCCAGGGCACCCTGTTCACCGTCTCCTCAG  353
V  92.0% (263/286)  IGHV5-51*01  276  .A..............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  100.0% (5/5)     IGHD2-21*02  18   ----------------------------------------.....--------------------------------------  22
J  97.2% (35/36)    IGHJ1*01     17   -----------------------------------------------....................G...............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_89867

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            343     2e-96
IGHD5-12*01                                                                                           14.1    9.1  
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CACCC	GTGGATA	AACCTAAGACTCCCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACCCGTGGATAAACCTAAGACTCCCCTCTACTACGGCATGTACGTC	ATPVDKPKTPLYYGMYV	264	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	77	27	23	4	0	85.2
FR2-IMGT	78	128	51	48	3	0	94.1
CDR2-IMGT	129	149	21	19	2	0	90.5
FR3-IMGT	150	263	114	101	13	0	88.6
CDR3-IMGT (germline)	264	267	4	4	0	0	100
Total	N/A	N/A	267	243	24	0	91


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  V  S  L  T  C  A  V  S  G  G  S  V  S  T  S  H  W  W  S  W  V  
                    Query_7628   1    CAGGACTGGTGAAGCCCTCGGGGACCGTGTCCCTCACCTGCGCTGTCTCTGGTGGGTCCGTCAGCACTAGTCACTGGTGGAGTTGGGTGC  90
V  91.0% (243/267)  IGHV4-4*02   26   ................T.........C............................C...A......G....A................C.  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  T  P  G  K  G  L  E  W  I  G  E  I  F  Q  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  
                    Query_7628   91   GCCAGACCCCAGGAAAGGGGCTGGAGTGGATTGGGGAAATCTTTCAGAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCA  180
V  91.0% (243/267)  IGHV4-4*02   116  .....C.......G............................A...T...........................................  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  M  S  L  D  K  S  K  N  H  V  S  L  R  V  N  A  A  A  A  A  D  T  A  V  Y  Y  F  A  T  
                    Query_7628   181  CCATGTCGTTAGACAAGTCCAAGAACCACGTCTCCCTGAGGGTGAACGCTGCGGCCGCCGCGGACACGGCCGTATATTACTTTGCGACAC  270
V  91.0% (243/267)  IGHV4-4*02   206  ....A..AG...................GT.........A.C...G.T...T.A...................G.......G.....---  292
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A     

                                      --------------CDR3-IMGT-------------------->                                 
                                      P  V  D  K  P  K  T  P  L  Y  Y  G  M  Y  V  W  G  Q  G  T  T  F  S  V  S  S 
                    Query_7628   271  CCGTGGATAAACCTAAGACTCCCCTCTACTACGGCATGTACGTCTGGGGCCAGGGGACCACGTTCTCCGTCTCCTCA  347
D  100.0% (7/7)     IGHD5-12*01  1    --.......--------------------------------------------------------------------  7
J  90.4% (47/52)    IGHJ6*02     11   -------------------------.........T...G.............A.........G..A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_89866

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	GGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARQGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_7629   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.9% (279/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_7629   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_7629   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  .......C.....................................C...........G......A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  Q  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_7629   271  CATATATTACTGTGCGAGACAGGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.9% (279/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_7629   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_72001

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           367     5e-104
IGHD2-15*01                                                                                           10.3    117   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTC	GTAGC	GA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCGTAGCGAACAACTGGTTCGACCCC	ARLVANNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_7630   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.2% (242/249)  IGHV4-31*03  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  V  G  S  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7630   91   CTGGAGTGGGTTGGGTCCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.2% (242/249)  IGHV4-31*03  139  .........A......A.................G.......................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  V  A  N  N  W  F 
                    Query_7630   181  AAGAACCAGTTCTCCCTGAAACTGAACTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGACTCGTAGCGAACAACTGGTTC  270
V  97.2% (242/249)  IGHV4-31*03  229  ....................G....G...........................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD2-15*01  18   ------------------------------------------------------------------------.....-------------  22
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7630   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_72000

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           377     9e-107
IGHD3-22*01                                                                                           46.8    1e-09 
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCCTGCTT	TATTACTATGATAGTAGTGGTTAT	C	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCCTGCTTTATTACTATGATAGTAGTGGTTATCTGGACGTC	ARSLLYYYDSSGYLDV	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	245	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  Y  P  G  K  G 
                    Query_7631   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGTACCCAGGGAAGGGC  90
V  98.4% (245/249)  IGHV4-31*03  49   .......................................A...................................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  T  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7631   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACACCCCGTCCCTCAAGAGTCGAGTTACCATATCAGTGGACACGTCT  180
V  98.4% (245/249)  IGHV4-31*03  139  ..............................................A.................................A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  L  Y  Y  Y  D 
                    Query_7631   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGATCCCTGCTTTATTACTATGAT  270
V  98.4% (245/249)  IGHV4-31*03  229  .....................................................................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (24/24)   IGHD3-22*01  2    ------------------------------------------------------------------------------............  13

                                      GT------------------>                                 
                                       S  S  G  Y  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7631   271  AGTAGTGGTTATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
D  100.0% (24/24)   IGHD3-22*01  14   ............------------------------------------------  25
J  100.0% (41/41)   IGHJ6*02     22   -------------.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_72007

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           344     6e-97
IGHD2-15*01                                                                                           25.7    0.003
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GCCG	GGATATTGTAGTG	ATAGCAAGTGT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGCCGGGATATTGTAGTGATAGCAAGTGTTACTATGGTATGGACCTC	AKEPGYCSDSKCYYGMDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  I  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7632   1    GGTCCTTGAGACTCTCCTGTATAGCCTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCTGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-30*18  47   .....C..............GC.......................G..............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7632   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCAG  180
V  94.0% (235/250)  IGHV3-30*18  137  ..............................................A.........................................CA  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      E  S  T  L  Y  L  H  M  D  P  L  R  A  E  D  T  A  V  Y  Y  C  A  K  E  P  G  Y  C  S  D  
                    Query_7632   181  AGAGCACACTGTATCTGCATATGGACCCCTTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGAGCCGGGATATTGTAGTGATA  270
V  94.0% (235/250)  IGHV3-30*18  227  ...A...G...........A...A..AG.C........................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (13/13)   IGHD2-15*01  2    --------------------------------------------------------------------------.............---  14

                                      IMGT--------------------->                                 
                                      S  K  C  Y  Y  G  M  D  L  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_7632   271  GCAAGTGTTACTATGGTATGGACCTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  329
J  94.1% (48/51)    IGHJ6*02     12   --------.....C.........G........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_89862

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         396     2e-112
IGHD6-19*01                                                                                           21.8    0.047 
IGHJ3*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CACCCCCTC	ATAACAGTGGCTGG	AAGGTTTC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACCCCCTCATAACAGTGGCTGGAAGGTTTCATGCTTTTGAAATC	ARHPLITVAGRFHAFEI	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	271	18	0	93.8


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  V  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  P  S  Y
                    Query_7633     1    GCAGCTGGTGCAGTCTGGAGCAGTTGTGAAGAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGCTCTGGATACAGTTTTCCCTCTTA  90
V  93.8% (271/289)  IGHV5-10-1*01  6    .......................AG.....A...................................T...........C...A..AGC..  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  S  Y  S  P
                    Query_7633     91   CTGGATCACCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAGCTACAGCCC  180
V  93.8% (271/289)  IGHV5-10-1*01  96   ........G..............T........................................................A.........  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  L  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_7633     181  GTCCCTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCACTAGCACTGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  93.8% (271/289)  IGHV5-10-1*01  186  ....T....................................TC..............................A................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------------CDR3-IMGT-------------------->                          
                                          I  Y  F  C  A  R  H  P  L  I  T  V  A  G  R  F  H  A  F  E  I  W  G  Q  G  T  M  V  T  V
                    Query_7633     271  CATCTATTTCTGTGCGAGACACCCCCTCATAACAGTGGCTGGAAGGTTTCATGCTTTTGAAATCTGGGGCCAAGGGACAATGGTCACCGT  360
V  93.8% (271/289)  IGHV5-10-1*01  276  ...G....A..........-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD6-19*01    5    ----------------------------...G..........------------------------------------------------  18
J  97.9% (47/48)    IGHJ3*02       3    --------------------------------------------------..........T.............................  42

                                                
                                          S  S  
                    Query_7633     361  CTCTTCAG  368
J  97.9% (47/48)    IGHJ3*02       43   ........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_72005

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-22*01                                                                                           25.7    0.003
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGC	AGTAGTGGTTATT	GG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTCGACCCC	ARGGSSGYWWFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7634   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTATTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*01  49   ...............................G..........A....C.......G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  F  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7634   91   TGGATTGGGTTTATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGGGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.9% (234/244)  IGHV4-59*01  139  ..........A.........C.................................A...................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  S  S  G  Y  W  W  F 
                    Query_7634   181  CAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTC  270
V  95.9% (234/244)  IGHV4-59*01  229  ...............C...G.................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD3-22*01  14   ---------------------------------------------------------------------.............--------  26
J  93.5% (43/46)    IGHJ5*02     6    ------------------------------------------------------------------------------------......  11

                                      ----->                                  
                                       D  P  W  G  Q  A  I  P  V  T  V  S  S  
                    Query_7634   271  GACCCCTGGGGCCAGGCAATCCCGGTCACCGTCTCCTCAG  310
J  93.5% (43/46)    IGHJ5*02     12   ................G..C..T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_89860

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           377     9e-107
IGHD3-10*01                                                                                           50.7    8e-11 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTT	GTATTACTATGGTTCGGGGAGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTGTATTACTATGGTTCGGGGAGTTATTCGGACTAC	ARSLYYYGSGSYSDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	245	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_7635   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (245/249)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7635   91   CTGGAGTGGATTGGGCACATCTACTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTAACCATATCAGTAGACACGTCT  180
V  98.4% (245/249)  IGHV4-31*03  139  ...............T.......T............................................T.....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  Y  G  S 
                    Query_7635   181  AAGAACCAGTTCTCCCTGAAGCTGAGATCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGATCCTTGTATTACTATGGTTCG  270
V  98.4% (245/249)  IGHV4-31*03  229  ..........................C..........................................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (26/26)   IGHD3-10*01  1    --------------------------------------------------------------------------................  16

                                      ----------------->                                  
                                       G  S  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7635   271  GGGAGTTATTCGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (26/26)   IGHD3-10*01  17   ..........------------------------------------------  26
J  100.0% (40/40)   IGHJ4*02     9    ------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_52108

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            330     1e-92
IGHD4-17*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTCTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	227	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_7636   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  93.4% (227/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  G  I  S  L  S  G  G  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_7636   91   GAGTGGATTGGGGGAATCTCTCTTAGTGGGGGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  93.4% (227/243)  IGHV4-4*02   139  .............A.....A..A.......A......A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_7636   181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTCTG  270
V  93.4% (227/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7636   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_88903

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           352     3e-99
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCATAGGGGTG	ATTACGATTTTTGGAGGGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCATAGGGGTGATTACGATTTTTGGAGGGGTTATTGACTACTTCGACTAC	ARSIGVITIFGGVIDYFDY	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	234	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7637   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (234/243)  IGHV4-59*08  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  S  T  K  Y  N  P  S  L  Q  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_7637   91   TGGATTGGTTATGTGTATTACAGTGGGAGCACCAAGTATAACCCCTCGCTCCAGAGTCGAGTCACCATATCACTAGACACCTCCAAGAAC  180
V  96.3% (234/243)  IGHV4-59*08  139  ........G...A.C....................C..C........C...A....................G.......G.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  I  G  V  I  T  I  F  G 
                    Query_7637   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGATCCATAGGGGTGATTACGATTTTTGGA  270
V  96.3% (234/243)  IGHV4-59*08  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.8% (23/24)    IGHD3-3*01   3    ---------------------------------------------------------------------------...............  17

                                      ----------------------->                                  
                                       G  V  I  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7637   271  GGGGTTATTGACTACTTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.8% (23/24)    IGHD3-3*01   18   .T.......-------------------------------------------------  26
J  97.9% (47/48)    IGHJ4*02     1    ----------.......T........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_68059

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7638   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7638   91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*01  139  ........GT........T.......G...............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_7638   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.5% (234/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7638   271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_352308

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           353     9e-100
IGHD1-26*01                                                                                           18.0    0.56  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	AGCA	AGTGGGAGC	CTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAAGCAAGTGGGAGCCTTATGACTCC	ARSKWEPYDS	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7639   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGTACCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  95.6% (237/248)  IGHV3-74*01  47   ....................................C........G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  K  S  D  G  S  S  G  T  Y  A  D  P  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7639   91   TGTGGGTCTCACGTATTAAAAGTGATGGGAGTAGCGGAACCTACGCGGACCCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (237/248)  IGHV3-74*01  137  ...................T...............AC..G..........T.......................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  P  Y  L  H  M  N  N  L  R  A  E  D  T  A  L  Y  Y  C  A  R  S  K  W  E  P  Y  D  
                    Query_7639   181  AGAACACGCCGTATCTGCACATGAACAATCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCAAGAAGCAAGTGGGAGCCTTATGACT  270
V  95.6% (237/248)  IGHV3-74*01  227  .........T.........A.......G......................G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD1-26*01  6    ------------------------------------------------------------------------.........---------  14
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7639   271  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_352309

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           427     1e-121
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTGA	TATGGTTCGCGGAGTT	CTTGAGAGGGAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTGATATGGTTCGCGGAGTTCTTGAGAGGGAGGACTAC	ARLDMVRGVLEREDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_7640   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGCAAGGGTTCTGGGTACAGCTTTTCCACCTA  90
V  97.2% (281/289)  IGHV5-51*03  6    ............................................................T...........A.........A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  S  P
                    Query_7640   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACAGCCC  180
V  97.2% (281/289)  IGHV5-51*03  96   ........G........................................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  A
                    Query_7640   181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACCCCGC  270
V  97.2% (281/289)  IGHV5-51*03  186  ........A............................................................................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  L  D  M  V  R  G  V  L  E  R  E  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7640   271  CATGTATTACTGTGCGAGACTTGATATGGTTCGCGGAGTTCTTGAGAGGGAGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  97.2% (281/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  93.8% (15/16)    IGHD3-10*01  8    ------------------------.........G......--------------------------------------------------  23
J  100.0% (40/40)   IGHJ4*02     9    ----------------------------------------------------......................................  46

                                        
                                        
                    Query_7640   361  AG  362
J  100.0% (40/40)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_226777

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           338     4e-95
IGHD2-21*01                                                                                           10.3    117  
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-21*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TA	GGTGA	AGCCCAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGTGAAGCCCAGTACTGGTACTTCGATCTC	RE*VKPSTGTSIS	237	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	26	27	25	1	1	92.6
CDR1-IMGT	27	50	24	20	4	0	83.3
FR2-IMGT	51	101	51	51	0	0	100
CDR2-IMGT	102	122	21	21	0	0	100
FR3-IMGT	123	236	114	108	6	0	94.7
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	244	232	11	1	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S   S  P  A  V  S  L  V  T  Q  S  V  V  P  T  G  A  G  S  G  S  P  Q  G  R  D  W  S
                    Query_7641   1    ACCCTGTCC-TCACCTGCAGTGTCTCTGGTGACTCAATCAGTGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  89
V  95.1% (232/244)  IGHV4-59*01  49   .........C.........C...........G...C......A...A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                        G  L  G  I  S  I  T  V  G  A  P  T  T  T  P  P  S  R  V  E  S  P  Y  Q  S  T  R  P  R  T
                    Query_7641   90   TGGATTGGGTATATCTATTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTCGACACGTCCGAGAAC  179
V  95.1% (232/244)  IGHV4-59*01  139  .................................A.............................A..........A.........A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                        S  S  P  *  S  *  T  L  *  P  L  R  T  R  P  C  I  T  V  R  E  *  V  K  P  S  T  G  T  S
                    Query_7641   180  AAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTAGGTGAAGCCCAGTACTGGTACTTC  269
V  95.1% (232/244)  IGHV4-59*01  229  C..................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*01  14   ------------------------------------------------------------------.....-------------------  18
J  100.0% (52/52)   IGHJ2*01     2    ------------------------------------------------------------------------------............  13

                                      ----->                                  
                                        I  S  G  A  V  A  P  W  S  L  S  P  Q 
                    Query_7641   270  GATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  309
J  100.0% (52/52)   IGHJ2*01     14   ........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_226776

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           416     2e-118
IGHD1-26*01                                                                                           12.2    33    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATAT	GTGGGA	AGGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATATGTGGGAAGGTACTACTTTGACAAC	AREYVGRYYFDN	267	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	30	0	0	100
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	152	21	19	2	0	90.5
FR3-IMGT	153	266	114	113	1	0	99.1
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	270	4	0	98.5


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  
                    Query_7642   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTAGTTACTACTGGAGCTGGA  90
V  98.5% (270/274)  IGHV4-61*01  26   ................T.........................................................................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  Y  T  N  Y  N  P  S  P  K  S  R  
                    Query_7642   91   TCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGTACACCAACTACAACCCCTCCCCCAAGAGTCGAG  180
V  98.5% (270/274)  IGHV4-61*01  116  ........................................................AG....................T...........  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  
                    Query_7642   181  TCACCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGA  270
V  98.5% (270/274)  IGHV4-61*01  206  ..........................................................................................  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------CDR3-IMGT------------>                                  
                                      R  E  Y  V  G  R  Y  Y  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7642   271  GAGAATATGTGGGAAGGTACTACTTTGACAACTGGGGCCAGGGAACCCTCGTCACCGTCTCCTCAG  336
V  98.5% (270/274)  IGHV4-61*01  296  ....--------------------------------------------------------------  299
                                      R                                                                 
D  100.0% (6/6)     IGHD1-26*01  7    --------......----------------------------------------------------  12
J  95.8% (46/48)    IGHJ4*02     1    ------------------...........T...................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_226775

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	22	2	6	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	221	24	6	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  H  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_7643   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTCATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.0% (221/251)  IGHV4-34*01  49   .......................C..T............------......T.C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_7643   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.0% (221/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_7643   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.0% (221/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_7643   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_352305

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-24*01                                                                                           403     1e-114
IGHD2-2*02                                                                                            18.0    0.68  
IGHJ6*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-24*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	GCGGTATCAAT	TGCTATACC	GATATGGCTTCTCCTATTATGCA	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGTATCAATTGCTATACCGATATGGCTTCTCCTATTATGCAATGGACGTC	ARYQLLYRYGFSYYAMDV	289	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	75	69	67	2	0	97.1
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	290	2	2	0	0	100
Total	N/A	N/A	284	271	13	0	95.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  V  S  G  Y  S  L  T  E  L 
                    Query_7644   7    CAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGTTTCCGGGTACAGCCTCACTGAATTA  96
V  95.4% (271/284)  IGHV1-24*01  7    ........A........................................A.....................A....C.............  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T  E  L 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  I  Y  W  V  R  Q  A  P  G  R  G  L  E  W  M  G  G  L  D  P  E  D  G  E  T  I  Y  A  Q 
                    Query_7644   97   TCCATCTACTGGGTGCGACAGGCTCCTGGAAGAGGGCTTGAGTGGATGGGAGGTCTTGATCCTGAAGATGGTGAAACAATCTATGCACAG  186
V  95.4% (271/284)  IGHV1-24*01  97   .....GC........................A......................T............................C......  186
                                       S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  I  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  F  Q  G  R  V  T  M  T  E  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 
                    Query_7644   187  AGGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACCGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCC  276
V  95.4% (271/284)  IGHV1-24*01  187  .A.............................................A..........................................  276
                                       K  F  Q  G  R  V  T  M  T  E  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  Y  Q  L  L  Y  R  Y  G  F  S  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_7644   277  GTCTACTACTGTGCGCGGTATCAATTGCTATACCGATATGGCTTCTCCTATTATGCAATGGACGTCTGGGGCCAAGGCACCACGGTGACC  366
V  95.4% (271/284)  IGHV1-24*01  277  ..G..T........----------------------------------------------------------------------------  290
                                       V  Y  Y  C  A                                                                            
D  100.0% (9/9)     IGHD2-2*02   23   -------------------------.........--------------------------------------------------------  31
J  95.2% (40/42)    IGHJ6*02     21   ---------------------------------------------------------....................G........C...  53

                                               
                                       V  S  S 
                    Query_7644   367  GTCTCCTCA  375
J  95.2% (40/42)    IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_352302

Length=412
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-24*01                                                                                           419     2e-119
IGHD2-2*02                                                                                            27.6    9e-04 
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-24*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAACA	TCTACCCCGGACACTGG	AGTACTACCAGGTGCTATAC	ACGACC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACATCTACCCCGGACACTGGAGTACTACCAGGTGCTATACACGACCACTACTACCACAGTATGGACGTC	ATSTPDTGVLPGAIHDHYYHSMDV	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	278	10	0	96.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T  E  L 
                    Query_7645   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTA  91
V  96.5% (278/288)  IGHV1-24*01  7    ........A........G........................................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T  E  L 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  V  Y  A  Q 
                    Query_7645   92   TCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAGGATGGTGAAACAGTTTATGCCCAG  181
V  96.5% (278/288)  IGHV1-24*01  97   .................................................................A............A.C..C..A...  186
                                       S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  I  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  E  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  G  D  T  A 
                    Query_7645   182  AAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTATATGGAGCTGAGCAGCCTGAGATCTGGGGACACGGCC  271
V  96.5% (278/288)  IGHV1-24*01  187  .....................................................C.........................A..........  276
                                       K  F  Q  G  R  V  T  M  T  E  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><-------------------------------CDR3-IMGT------------------------------>      
                                       V  Y  Y  C  A  T  S  T  P  D  T  G  V  L  P  G  A  I  H  D  H  Y  Y  H  S  M  D  V  W  G 
                    Query_7645   272  GTCTATTACTGTGCAACATCTACCCCGGACACTGGAGTACTACCAGGTGCTATACACGACCACTACTACCACAGTATGGACGTCTGGGGC  361
V  96.5% (278/288)  IGHV1-24*01  277  ..G...............------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  T                                                                         
D  90.0% (18/20)    IGHD2-2*02   11   -----------------------------------....G......C........-----------------------------------  30
J  92.9% (52/56)    IGHJ6*02     7    -------------------------------------------------------------........T..G.................  35

                                                                 
                                       Q  G  T  T  V  T  V  S  S 
                    Query_7645   362  CAGGGAACCACGGTCACCGTCTCCTCA  388
J  92.9% (52/56)    IGHJ6*02     36   ..A..G.....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40393728


Query= Query_352303

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         333     1e-93
IGHD3-10*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGCTCGGC	GGTTCGGGGAGTTA	CC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTCGGCGGTTCGGGGAGTTACCACTAC	ARGLGGSGSYHY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  V  S  G  V  A  F  S  S  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7646     1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGAGTCGCCTTCAGCAGCTATGCTATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.1% (230/247)  IGHV3-30-3*01  47   ........................C.......T..A.......T...........G..................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  L  I  S  H  D  G  S  S  K  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7646     91   AGTGGGTGGCACTTATATCACATGATGGAAGCAGTAAATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (230/247)  IGHV3-30-3*01  137  ...........G........T............A........A...............................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                        K  N  T  V  Y  L  Q  M  N  S  L  R  N  E  D  T  A  V  Y  H  C  A  R  G  L  G  G  S  G  S  
                    Query_7646     181  AGAACACGGTATATCTACAGATGAACAGCCTGAGAAATGAGGACACGGCTGTTTATCACTGTGCGAGGGGGCTCGGCGGTTCGGGGAGTT  270
V  93.1% (230/247)  IGHV3-30-3*01  227  ........C.G.....G..A...............GC...............G...T..........-----------------------  293
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (14/14)   IGHD3-10*01    11   -----------------------------------------------------------------------------.............  23

                                        ------->                                
                                        Y  H  Y  W  G  Q  G  T  L  V  A  V  S  S
                    Query_7646     271  ACCACTACTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  310
D  100.0% (14/14)   IGHD3-10*01    24   .---------------------------------------  24
J  97.3% (36/37)    IGHJ4*02       10   ---..........................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_226771

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_7647  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01  49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_7647  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01  139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_7647  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01  229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01  13   ----------------------------------------------------------------------.....C..G...--------  24

                                     ----------->                                  
                                      G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_7647  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02    6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_352301

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     5e-96
IGHD6-19*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAGATATCTCC	TAGCAGTGGCTGGT	CAACACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGATATCTCCTAGCAGTGGCTGGTCAACACCTCTATTTGACTAC	ARQISPSSGWSTPLFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  T  Y  T  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_7648   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTACCTATACCATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (233/248)  IGHV3-21*01  47   ....................G........................G.....G....A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  S  F  I  N  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7648   91   AGTGGGTCTCATCCATCAGTAGTAGAGGTAGTTTCATAAATTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (233/248)  IGHV3-21*01  137  ................T........TA......A....T.C............G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  I  S  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  S  S  G  
                    Query_7648   181  AGAACTCACTGTATCTGCAAATAAGCAGCCTGAGAGGCGAGGACACGGCTGTTTATTACTGTGCGAGACAGATATCTCCTAGCAGTGGCT  270
V  94.0% (233/248)  IGHV3-21*01  227  ......................G.A...........C...............G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD6-19*01  6    -------------------------------------------------------------------------------...........  16

                                      GT-------------------->                                  
                                      W  S  T  P  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7648   271  GGTCAACACCTCTATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (14/14)   IGHD6-19*01  17   ...------------------------------------------------------  19
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_252599

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           338     5e-95
IGHD2-21*02                                                                                           12.2    32   
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGCGGG	GACTGC	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCGGGGACTGCCTACTACTACGGCATGGACGTC	ARGAGTAYYYGMDV	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  N  S  G  G  Y  F  W  S  W  I  R  Q  T  P  G  K  G 
                    Query_7649   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAACAGTGGTGGTTACTTCTGGAGCTGGATCCGGCAGACCCCAGGGAAGGGA  90
V  93.2% (233/250)  IGHV4-61*08  49   ..................A.................G...G..............A...................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  M  Y  Y  S  G  S  T  D  Y  H  P  S  L  R  S  R  V  S  I  S  V  D  T  S 
                    Query_7649   91   CTGGAGTGGATTGGCTATATGTATTACAGTGGGAGCACCGATTACCACCCCTCCCTCAGGAGTCGAGTCAGCATATCAGTCGACACGTCC  180
V  93.2% (233/250)  IGHV4-61*08  139  ..............G.....C..................A.C...A............A...........C.........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  T  A  Y  Y 
                    Query_7649   181  AAGAACCAGTTCTCCCTAAACCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGGCGGGGACTGCCTACTAC  270
V  93.2% (233/250)  IGHV4-61*08  229  .................G..G.....C...........T...............................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-21*02  17   -----------------------------------------------------------------------------......-------  22
J  98.2% (54/55)    IGHJ6*02     8    -----------------------------------------------------------------------------------.......  14

                                      -------------->                                 
                                       Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7649   271  TACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  98.2% (54/55)    IGHJ6*02     15   .....T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_334709

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         377     8e-107
IGHD3-10*01                                                                                           12.2    31    
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ATGTACGTACATAAA	GGGGAG	GC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAATGTACGTACATAAAGGGGAGGCTATGGACGTC	ARMYVHKGEAMDV	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	245	4	0	98.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_7650     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGTAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  98.4% (245/249)  IGHV4-30-4*01  49   ..................A......................C.......A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7650     91   CTGGAGTGGATTGGGTACATCTACTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  98.4% (245/249)  IGHV4-30-4*01  139  .......................T..................................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  M  Y  V  H  K  G  E 
                    Query_7650     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAATGTACGTACATAAAGGGGAG  270
V  98.4% (245/249)  IGHV4-30-4*01  229  .....................................................................---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01    16   ------------------------------------------------------------------------------------......  21

                                        ----------->                                 
                                         A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7650     271  GCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  315
J  100.0% (43/43)   IGHJ6*02       20   --...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_252590

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           358     4e-101
IGHD5-12*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	N/A	TGGATATAGT	TATGGCCGGGCCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATGGATATAGTTATGGCCGGGCCCCCTTTGACAAC	ANGYSYGRAPFDN	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7651   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCCTTTAGCAGCTACGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (238/247)  IGHV3-23*01  47   ...................................A.............T.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  N  S  G  T  T  Y  Y  A  D  S  V  K  G  R  V  T  I  S  R  D  N  S  
                    Query_7651   91   AGTGGGTCTCAGTTATTAGTGGTAATAGTGGTACCACATACTACGCAGACTCCGTGAAGGGCCGGGTCACCATCTCCAGAGACAATTCCA  180
V  96.4% (238/247)  IGHV3-23*01  137  ............C...........G.G......G...............................T........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  N  G  Y  S  Y  G  R  A  
                    Query_7651   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGGGGACACGGCCGTATATTACTGTGCGAATGGATATAGTTATGGCCGGGCCC  270
V  96.4% (238/247)  IGHV3-23*01  227  .......................................A...........................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD5-12*01  2    -------------------------------------------------------------------..........-------------  11

                                      ---------->                                  
                                      P  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7651   271  CCTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (43/44)    IGHJ4*02     5    -.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_252591

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     2e-90
IGHD3-10*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCGGAGGTTCC	ACTATGG	CCACCTGACACCAC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCGGAGGTTCCACTATGGCCACCTGACACCACTTGAGTAC	ASRRFHYGHLTPLEY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	224	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  N  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_7652   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAACTGGGTCCGCCAGACCCCAGGGAGGGGGCTGGAG  90
V  92.6% (224/242)  IGHV4-34*01  49   .......................................................G....A........C.........A..........  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  V  N  H  S  G  N  S  N  S  N  P  S  L  K  S  R  V  T  I  L  V  D  T  S  K  N 
                    Query_7652   91   TGGCTTGGGGAAGTCAATCATAGTGGCAACAGCAACTCCAACCCGTCCCTCAAGAGTCGAGTCACCATATTAGTCGACACGTCCAAGAAC  180
V  92.6% (224/242)  IGHV4-34*01  139  ...A........A.............A.G..C.....A................................C...A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  S  R  R  F  H  Y  G  H  L  T 
                    Query_7652   181  CAGTTCTCCCTGAAACTGACTTCTGTGACCGCCGCGGACACGGCTCTTTATTATTGTGCGAGTCGGAGGTTCCACTATGGCCACCTGACA  270
V  92.6% (224/242)  IGHV4-34*01  229  ..............G....GC........................G.G.....C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD3-10*01  6    -------------------------------------------------------------------------.......----------  12

                                      ----------->                                  
                                       P  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7652   271  CCACTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.6% (41/42)    IGHJ4*02     7    ----....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_252592

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           283     1e-78
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	235	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	18	21	4	4	0	0	100
CDR1-IMGT	22	45	24	19	5	0	79.2
FR2-IMGT	46	96	51	50	1	0	98
CDR2-IMGT	97	120	24	21	3	0	87.5
FR3-IMGT	121	234	114	105	9	0	92.1
Total	N/A	N/A	217	199	18	0	91.7


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  L  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_7653   18   GTCTGGACTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAATGGGTGGCAGTTATATGGTATGA  107
V  91.7% (199/217)  IGHV3-33*03  72   .......T....C..C.....C.....C......................................G.......................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  I  K  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  F  L  Q  M  N
                    Query_7653   108  TGGCATTAAAAAATTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCAAGAACACCCTGTTTCTGCAGATGAA  197
V  91.7% (199/217)  IGHV3-33*03  162  ...A.G...T....A...........................................A.............G....A......A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------CDR3-IMGT----------->                    
                                        S  L  R  A  D  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  D  P  W  G  Q  G  T  L  V
                    Query_7653   198  CAGCCTGAGAGCCGACGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  287
V  91.7% (199/217)  IGHV3-33*03  252  ...............G.........G.G.....C...-----------------------------------------------------  288
                                        S  L  R  A  E  D  T  A  V  Y  Y  C                                                      
D  90.9% (10/11)    IGHD6-13*01  7    ------------------------------------------....G......-------------------------------------  17
J  100.0% (46/46)   IGHJ5*02     6    ----------------------------------------------------------................................  37

                                                    
                                        T  V  S  S  
                    Query_7653   288  CACCGTCTCCTCAG  301
J  100.0% (46/46)   IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_252594

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           367     6e-104
IGHD2-21*02                                                                                           12.2    34    
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGCGGG	GACTGC	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCGGGGACTGCCTACTACTACGGCATGGACGTC	ARGAGTAYYYGMDV	267	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	80	30	27	3	0	90
FR2-IMGT	81	131	51	49	2	0	96.1
CDR2-IMGT	132	152	21	20	1	0	95.2
FR3-IMGT	153	266	114	105	9	0	92.1
CDR3-IMGT (germline)	267	273	7	7	0	0	100
Total	N/A	N/A	273	254	19	0	93


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  S  C  A  V  S  G  G  S  I  N  S  G  G  Y  F  W  S  W  
                    Query_7654   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCTCTCTCCTGCGCTGTCTCTGGTGGCTCCATCAACAGTGGTGGTTACTTCTGGAGCTGGA  90
V  93.0% (254/273)  IGHV4-61*08  26   ................T..............C...A.....A.................G...G..............A...........  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  T  P  G  K  G  L  E  W  I  G  Y  M  Y  Y  S  G  S  T  D  Y  H  P  S  L  R  S  R  
                    Query_7654   91   TCCGGCAGACCCCAGGGAAGGGACTGGAGTGGATTGGCTATATGTATTACAGTGGGAGCACCGATTACCACCCCTCCCTCAGGAGTCGAG  180
V  93.0% (254/273)  IGHV4-61*08  116  ........C............................G.....C..................A.C...A............A........  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  S  I  S  V  D  T  S  K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  
                    Query_7654   181  TCAGCATATCAGTCGACACGTCCAAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGA  270
V  93.0% (254/273)  IGHV4-61*08  206  ...C.........A.............................G.....C...........T............................  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      -------------CDR3-IMGT--------------->                                 
                                      R  G  A  G  T  A  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7654   271  GAGGGGCGGGGACTGCCTACTACTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
V  93.0% (254/273)  IGHV4-61*08  296  ...--------------------------------------------------------------------  298
                                      R                                                                      
D  100.0% (6/6)     IGHD2-21*02  17   ----------......-------------------------------------------------------  22
J  98.2% (54/55)    IGHJ6*02     8    ----------------............T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_252595

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           416     2e-118
IGHD3-9*01                                                                                            23.8    0.012 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCACT	TTACAATATTTTGAC	ACATTACCAACCTC	TGAGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCACTTTACAATATTTTGACACATTACCAACCTCTGAGTAC	ARATLQYFDTLPTSEY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	70	68	67	1	0	98.5
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	288	277	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT-----------------------------><-------CDR1-IMGT-----
                                         L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  N  V  S  C  K  A  S  G  Y  S  F  T  R  Y  
                    Query_7655   3    AGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAACGTCTCCTGCAAGGCTTCTGGTTACAGCTTTACCAGGTACG  92
V  96.2% (277/288)  IGHV1-18*04  8    .................................................G.........................C.........C....  97
                                         L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y  

                                      -><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------------
                                      A  I  S  W  V  R  Q  A  P  G  Q  G  L  D  W  M  G  W  V  S  A  N  N  G  K  T  N  Y  A  Q  
                    Query_7655   93   CTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGACTGGATGGGATGGGTCAGCGCAAACAATGGTAAAACGAACTATGCACAGA  182
V  96.2% (277/288)  IGHV1-18*04  98   G.......................................G............A.......TT..........C..A.............  187
                                      G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q  

                                      ----------------------------------------FR3-IMGT------------------------------------------
                                      K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A  
                    Query_7655   183  AGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCCG  272
V  96.2% (277/288)  IGHV1-18*04  188  ..C.......................................................................................  277
                                      K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A  

                                      ----------><-------------------CDR3-IMGT------------------>                               
                                      V  Y  Y  C  A  R  A  T  L  Q  Y  F  D  T  L  P  T  S  E  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_7655   273  TGTATTACTGTGCGAGAGCCACTTTACAATATTTTGACACATTACCAACCTCTGAGTACTGGGGCCAGGGAACCCTGGTTACCGTCTCCT  362
V  96.2% (277/288)  IGHV1-18*04  278  ..................------------------------------------------------------------------------  295
                                      V  Y  Y  C  A  R                                                                          
D  93.3% (14/15)    IGHD3-9*01   4    -----------------------....G..........----------------------------------------------------  18
J  95.1% (39/41)    IGHJ4*02     8    ----------------------------------------------------...C.......................C..........  45

                                         
                                      S  
                    Query_7655   363  CAG  365
J  95.1% (39/41)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_252596

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD6-19*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	261	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	20	1	0	95.2
FR3-IMGT	147	260	114	107	7	0	93.9
CDR3-IMGT (germline)	261	267	7	6	1	0	85.7
Total	N/A	N/A	267	250	17	0	93.6


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  
                    Query_7656   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACTTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGC  90
V  93.6% (250/267)  IGHV4-59*01  26   ................T....................C........................AG....T..............A......  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  
                    Query_7656   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCA  180
V  93.6% (250/267)  IGHV4-59*01  116  .................................AT...T...................................A...............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  
                    Query_7656   181  TATCAGTGGACACGTCCAAGAATCAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTA  270
V  93.6% (250/267)  IGHV4-59*01  206  .......A..............C...................G...........................G..T..C...G......---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -CDR3-IMGT--------->                                  
                                      S  G  W  L  A  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7656   271  GTGGGTGGCTGGCTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (8/8)     IGHD6-19*01  11   ----........------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    -------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_252597

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD3-22*01                                                                                           18.0    0.64  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGAAA	TATGACTATGAT	CTTGGAGACGTGGGTCTCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGAAATATGACTATGATCTTGGAGACGTGGGTCTCCACAACTTTGACTCC	ARAPKYDYDLGDVGLHNFDS	261	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	104	10	0	91.2
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	247	20	0	92.5


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  M  S  N  Y  F  W  S  W  I  R  
                    Query_7657   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTAATTACTTCTGGAGCTGGATTCGGC  90
V  92.5% (247/267)  IGHV4-59*01  26   ................T............................................C....G.....A............C....  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  R  L  E  W  I  G  Y  I  Y  Y  S  G  L  T  K  Y  N  P  S  L  K  S  R  V  S  
                    Query_7657   91   AGCCCCCAGGGAAGAGACTGGAGTGGATTGGGTATATCTATTATAGTGGACTCACCAAGTACAACCCGTCCCTCAAGAGTCGAGTCAGCA  180
V  92.5% (247/267)  IGHV4-59*01  116  ..............G............................C.....GAG......C........C...................C..  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  I  D  T  P  K  N  H  F  S  L  K  V  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  A  
                    Query_7657   181  TATCAATTGACACGCCCAAGAACCACTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCATTTATTACTGTGCGAGAGCCC  270
V  92.5% (247/267)  IGHV4-59*01  206  .....G.A......T..........G............C.............................G.G................---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      ----------------CDR3-IMGT------------------------>                                  
                                      P  K  Y  D  Y  D  L  G  D  V  G  L  H  N  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7657   271  CGAAATATGACTATGATCTTGGAGACGTGGGTCTCCACAACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  354
D  91.7% (11/12)    IGHD3-22*01  2    -----...T........-------------------------------------------------------------------  13
J  97.8% (44/45)    IGHJ4*02     4    ---------------------------------------.........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_317282

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           410     1e-116
IGHD1-1*01                                                                                            10.3    133   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAACG	GGTAACCCCATATCGCGGC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTAT	ARGTGNPISRLGY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_7658   1    GCAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTA  90
V  95.2% (276/290)  IGHV1-46*01  6    ..................G.C.....................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  A  G  S  T  N  Y  A  Q
                    Query_7658   91   CTATGTGCACTGGGTACGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGCTGGTAGCACAAATTACGCGCA  180
V  95.2% (276/290)  IGHV1-46*01  96   ....A..........G....................................................G...........GC.....A..  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  L  D  L  S  S  L  K  S  D  D  T  A
                    Query_7658   181  GAAATTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACTTGGACCTGAGCAGCCTTAAATCTGACGACACGGC  270
V  95.2% (276/290)  IGHV1-46*01  186  ...G...................................................A....G...........G.G......G........  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  G  T  G  N  P  I  S  R  L  G  Y  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_7658   271  CGTGTATTACTGTGCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  356
V  95.2% (276/290)  IGHV1-46*01  276  ....................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (5/5)     IGHD1-1*01   11   --------------------.....-------------------------------------------------------------  15
J  92.9% (39/42)    IGHJ4*02     7    --------------------------------------------...A...C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_317283

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           396     2e-112
IGHD3-3*01                                                                                            12.2    35    
IGHJ1*01                                                                                              56.4    4e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGAGCAA	GAGTGG	CCGCCCAGTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGAGCAAGAGTGGCCGCCCAGTTC	ARDGARVAAQF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  V  S  G  D  T  F  S  T  Y
                    Query_7659   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGCAAGGTCTCTGGAGACACCTTCAGCACCTA  90
V  93.5% (272/291)  IGHV1-69*01  6    ..................................................A..............CT.......G...........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        S  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  A  S  K  Y  A  Q
                    Query_7659   91   TTCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCATCATCCCTATATTCGGTGCATCAAAGTACGCACA  180
V  93.5% (272/291)  IGHV1-69*01  96   .G....................................................G...........C..T...A..G....C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  A  S  T  V  N  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_7659   181  GAAGTTCCAGGGCAGAGTCACGATAACCGCGGACGAATCCGCGAGCACAGTCAACATGGAGCTGAGTAGCCTGAGGTCTGAGGACACGGC  270
V  93.5% (272/291)  IGHV1-69*01  186  ........................T...............A.........C.T.............C........A..............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        V  Y  Y  C  A  R  D  G  A  R  V  A  A  Q  F  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_7659   271  CGTATATTACTGTGCGAGAGATGGAGCAAGAGTGGCCGCCCAGTTCTGGGGCCAGGGCACCCTGGTCAGCGTCTCGTCAG  350
V  93.5% (272/291)  IGHV1-69*01  276  ...G.................-----------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD3-3*01   16   -----------------------------......---------------------------------------------  21
J  94.3% (33/35)    IGHJ1*01     18   ---------------------------------------------.......................C......C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_317284

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            358     4e-101
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GTTCA	TACTATGATAATAGTGGTTAT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGTTCATACTATGATAATAGTGGTTATGACTACTATTACGGTATGGACGTC	AKGSYYDNSGYDYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7660   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGAGGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.0% (239/249)  IGHV3-9*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  N  L  G  Y  A  Y  S  V  K  G  R  S  T  I  S  R  D  S  A  
                    Query_7660   91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAACTTAGGCTATGCGTACTCTGTGAAGGGCCGGTCCACCATCTCCAGAGACAGCGCCA  180
V  96.0% (239/249)  IGHV3-9*01   137  .................................G.A...........G................A.T.................A.....  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  K  P  E  D  T  A  L  Y  Y  C  A  K  G  S  Y  Y  D  N  S  
                    Query_7660   181  AGAACTCCCTGTATCTGCAGATGAACAGTCTGAAACCTGAGGACACGGCCTTGTATTACTGTGCAAAAGGTTCATACTATGATAATAGTG  270
V  96.0% (239/249)  IGHV3-9*01   227  ...................A.............G.G.................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  95.2% (20/21)    IGHD3-22*01  5    --------------------------------------------------------------------------..........G.....  20

                                      -IMGT----------------------->                                 
                                      G  Y  D  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7660   271  GTTATGACTACTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  95.2% (20/21)    IGHD3-22*01  21   .....---------------------------------------------------------  25
J  98.2% (55/56)    IGHJ6*02     7    ------.......C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_317286

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           346     2e-97
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATGG	GGTTCGAGGA	CACTCGACCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTTCGAGGACACTCGACCGTTTTTGATATC	ARDGVRGHSTVFDI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  N  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7661   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTAACTCTTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (232/243)  IGHV4-59*08  49   ........................................G....T...AC.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_7661   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTATAATCCCTCCCTTAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  95.5% (232/243)  IGHV4-59*08  139  ......................................C..C........C.....................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  V  R  G  H  S  T  V 
                    Query_7661   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGATGGGGTTCGAGGACACTCGACCGTT  270
V  95.5% (232/243)  IGHV4-59*08  229  ....................C........C.......................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD3-10*01  11   --------------------------------------------------------------------......G...------------  20
J  90.9% (40/44)    IGHJ3*02     7    -----------------------------------------------------------------------------------------.  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  T  I  F  V  S  S  
                    Query_7661   271  TTTGATATCTGGGGCCAAGGGACAACGATCTTCGTCTCTTCAG  313
J  90.9% (40/44)    IGHJ3*02     8    .........................T.G..AC...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_296078

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           388     5e-110
IGHD3-22*01                                                                                           18.0    0.67  
IGHJ3*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAAAGAAACA	TATTCCTATGACAGT	GGCAGTGGAC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAAAGAAACATATTCCTATGACAGTGGCAGTGGACCTTTTGATATC	ARGKETYSYDSGSGPFDI	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_7662   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCTCCAGTTA  90
V  92.8% (269/290)  IGHV1-69*06  6    ..................................................................................AG...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  V  P  M  F  P  T  A  D  S  P  E
                    Query_7662   91   TGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCGTACCTATGTTTCCAACAGCAGACTCCCCCGA  180
V  92.8% (269/290)  IGHV1-69*06  96   ........G.................................................A.C.....C...GGT......A...A.G.AC.  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  E  D  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_7662   181  GAAGTTCGAGGACAGAGTCACGATTACCGCGGACAAATCAACGAGCACAGCCTACATGGAACTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  92.8% (269/290)  IGHV1-69*06  186  .......C...G...........................C....................G.............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  G  K  E  T  Y  S  Y  D  S  G  S  G  P  F  D  I  W  G  Q  G  T  M  V  T
                    Query_7662   271  CATGTATTATTGTGCGAGAGGGAAAGAAACATATTCCTATGACAGTGGCAGTGGACCTTTTGATATCTGGGGCCAAGGGACAATGGTCAC  360
V  92.8% (269/290)  IGHV1-69*06  276  .G.......C..........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  86.7% (13/15)    IGHD3-22*01  2    -------------------------------....A......T...--------------------------------------------  16
J  100.0% (45/45)   IGHJ3*02     6    --------------------------------------------------------..................................  39

                                                 
                                        V  S  S  
                    Query_7662   361  CGTCTCTTCAG  371
J  100.0% (45/45)   IGHJ3*02     40   ...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_296077

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           445     2e-127
IGHJ5*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	N/A	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TCAGGGATCGCATCTAGGA	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGATCGCATCTAGGATGGTTCGACCCC	ARDQGSHLGWFDP	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	288	3	0	99


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_7663   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  99.0% (288/291)  IGHV1-69*01  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q
                    Query_7663   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACA  180
V  99.0% (288/291)  IGHV1-69*01  96   ..........................................................................................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  I  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_7663   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCATAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  99.0% (288/291)  IGHV1-69*01  186  ...............................................C..........................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  D  Q  G  S  H  L  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7663   271  CGTCTATTACTGTGCGAGAGATCAGGGATCGCATCTAGGATGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  99.0% (288/291)  IGHV1-69*01  276  ...G.................-----------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                    
J  100.0% (46/46)   IGHJ5*02     6    ----------------------------------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_317289

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           335     4e-94
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GGG	CTATGCTTCGGGGAGTCATT	TCAAATCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGGGCTATGCTTCGGGGAGTCATTTCAAATCTCACTTTGACTAC	AKEGYASGSHFKSHFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  T  P  G  Q  G  L  
                    Query_7664   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAGTTATGGCATGCACTGGGTCCGCCAGACTCCAGGCCAGGGACTGG  90
V  92.8% (232/250)  IGHV3-30*18  47   ...........................................T..C........................G........A....G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  V  S  S  D  G  S  V  Q  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7664   91   AGTGGCTGGCAGTTGTATCAAGTGATGGAAGTGTTCAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCC  180
V  92.8% (232/250)  IGHV3-30*18  137  .....G........A.....TA..........AA.A.....................................................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      Q  N  T  L  Y  L  Q  M  N  R  L  R  S  E  D  T  A  V  Y  Y  C  A  K  E  G  Y  A  S  G  S  
                    Query_7664   181  AGAACACGCTGTATCTGCAAATGAATAGACTGAGATCTGAGGATACGGCTGTTTATTACTGTGCGAAAGAGGGCTATGCTTCGGGGAGTC  270
V  92.8% (232/250)  IGHV3-30*18  227  .........................C..C......G.......C........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (18/20)    IGHD3-10*01  7    -------------------------------------------------------------------------.....G..........T  23

                                      GT-------------------->                                  
                                      H  F  K  S  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7664   271  ATTTCAAATCTCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  90.0% (18/20)    IGHD3-10*01  24   ...------------------------------------------------------  26
J  100.0% (45/45)   IGHJ4*02     4    ------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_296075

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           364     5e-103
IGHD3-16*01                                                                                           18.0    0.65  
IGHJ1*01                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-16*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGAAAC	TTGGGGGAG	CTGGACTC	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGAAACTTGGGGGAGCTGGACTCC	ARGRNLGELDS	290	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	70	5	0	93.3
CDR1-IMGT	77	100	24	16	8	0	66.7
FR2-IMGT	101	151	51	46	5	0	90.2
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	103	11	0	90.4
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	264	31	0	89.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  M  K  K  P  G  A  S  V  E  I  S  C  K  A  S  G  Y  N  F  G 
                    Query_7665   2    CAGGTTCAGCTGGTGCAGTCTGGGGCTGAGATGAAGAAGCCTGGGGCCTCAGTGGAAATTTCCTGCAAGGCATCTGGTTACAATTTCGGC  91
V  89.5% (264/295)  IGHV1-46*01  1    .....G........................G.......................A.GG...................A....CC...AC.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       G  Y  H  I  H  W  V  R  Q  A  P  G  Q  G  L  E  Y  M  G  L  I  Y  P  S  G  G  S  T  S  Y 
                    Query_7665   92   GGCTATCATATACACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAATATATGGGATTAATCTACCCTAGTGGTGGTAGCACCAGCTAC  181
V  89.5% (264/295)  IGHV1-46*01  91   A....CT....G...................................G.GG......A.....A...................A......  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       P  Q  K  F  Q  G  R  V  T  M  T  S  D  T  S  T  N  T  V  Y  L  A  L  T  S  L  K  S  E  D 
                    Query_7665   182  CCGCAGAAGTTCCAGGGCAGAGTCACCATGACCAGCGACACGTCTACGAACACCGTCTACTTGGCCCTGACCAGCCTGAAATCTGAGGAC  271
V  89.5% (264/295)  IGHV1-46*01  181  G.A................................G........C....G...A......A...AG....G........G..........  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------CDR3-IMGT----------->                                  
                                       T  A  V  Y  Y  C  A  R  G  R  N  L  G  E  L  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7665   272  ACGGCCGTGTATTACTGTGCGAGAGGCCGAAACTTGGGGGAGCTGGACTCCTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  356
V  89.5% (264/295)  IGHV1-46*01  271  .........................------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                              
D  100.0% (9/9)     IGHD3-16*01  16   ---------------------------------.........-------------------------------------------  24
J  100.0% (35/35)   IGHJ1*01     18   --------------------------------------------------...................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_296074

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_7666   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  90.6% (221/244)  IGHV4-59*01  50   .....TCC...A....C.............G........G.AG..A......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S  
                    Query_7666   94   GGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCGGTAGACACGTCCAAGAGCC  183
V  90.6% (221/244)  IGHV4-59*01  140  .......G......T..........G.GC.............................A.T......A..A................A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  L  S  S  L  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F  
                    Query_7666   184  AGTTCTCCCTGAAGCTGAGCTCTCTGACCGCTGCGGACGCGGCCGTGTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTTG  273
V  90.6% (221/244)  IGHV4-59*01  230  .......................G..............A.........................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------------------------.......C.G..A..  15

                                      ------------------->                                  
                                      G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7666   274  GTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  83.3% (15/18)    IGHD5-18*01  16   ...---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    -----.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_296073

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           400     9e-114
IGHD1-1*01                                                                                            10.3    133   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAACG	GGTAACCCCATATCGCGGC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTAT	ARGTGNPISRLGY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_7667   1    GCAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTA  90
V  94.1% (273/290)  IGHV1-46*01  6    ..................G.C...............................G.....................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  T  G  G  T  N  Y  A  Q
                    Query_7667   91   TTATATGCACTGGGTACGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTACTGGTGGCACAAATTACGCACA  180
V  94.1% (273/290)  IGHV1-46*01  96   C..............G...................................................GG....A......GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  P  T  S  T  V  Y  L  D  L  S  S  L  E  S  E  D  T  A
                    Query_7667   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGCCCACGAGCACAGTCTACTTGGACCTGAGCAGCCTTGAATCTGAGGACACGGC  270
V  94.1% (273/290)  IGHV1-46*01  186  .....................................T.................A....G...........GAG...............  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  G  T  G  N  P  I  S  R  L  G  Y  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_7667   271  CGTTTATTACTGTGCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  356
V  94.1% (273/290)  IGHV1-46*01  276  ...G................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (5/5)     IGHD1-1*01   11   --------------------.....-------------------------------------------------------------  15
J  92.9% (39/42)    IGHJ4*02     7    --------------------------------------------...A...C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_296071

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           324     8e-91
IGHD3-3*01                                                                                            23.8    0.011
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTCTTTAATG	ACGATTATTGGAGTG	ATGATTTTCGTCGACACCTAGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCTTTAATGACGATTATTGGAGTGATGATTTTCGTCGACACCTAGGGCTTGACAAC	ARHVFNDDYWSDDFRRHLGLDN	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	229	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  V  T  A  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_7668   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCTGTCACTGCCAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  91.2% (229/251)  IGHV4-39*01  49   ...............................G...CA...GCAGT............................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  H  T  S 
                    Query_7668   91   CTGGAGTGGATTGGAAATATCTATTATAGTGGGACCACCTACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCCGTGCACACGTCC  180
V  91.2% (229/251)  IGHV4-39*01  139  ..............G.G.................G...............G.......................A.....AG........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  H  V  F  N  D  D  Y 
                    Query_7668   181  AAGAATCAGTTCTCCCTGAGGCTGAATTCTGTGACCGCCGCAGACTCGGCTGTATATTACTGTGCGAGACATGTCTTTAATGACGATTAT  270
V  91.2% (229/251)  IGHV4-39*01  229  .....C.............A.....GC..................A.......G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  93.3% (14/15)    IGHD3-3*01   6    ----------------------------------------------------------------------------------......T.  13

                                      --CDR3-IMGT--------------------------->                                  
                                       W  S  D  D  F  R  R  H  L  G  L  D  N  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_7668   271  TGGAGTGATGATTTTCGTCGACACCTAGGGCTTGACAACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  343
D  93.3% (14/15)    IGHD3-3*01   14   .......------------------------------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    -------------------------------.....T........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_296070

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD2-2*02                                                                                            12.2    32    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCA	CTGGTATAC	TTACGTCAGCGGGGGATATG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTGGTATACTTACGTCAGCGGGGGATATGTTGACTAC	ARGHWYTYVSGGYVDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_7669   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S 
                    Query_7669   91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGCTACCATATCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ................A.................G................................T......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  W  Y  T  Y  V 
                    Query_7669   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCACTGGTATACTTACGTC  270
V  97.6% (244/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (8/9)      IGHD2-2*02   22   --------------------------------------------------------------------------...C.....-------  30

                                      GT------------------>                                  
                                       S  G  G  Y  V  D  Y  W  G  Q  G  T  L  V  P  D  S  S  
                    Query_7669   271  AGCGGGGGATATGTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGACTCCTCAG  325
J  95.2% (40/42)    IGHJ4*02     7    -------------.............................A...T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_339987

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           293     2e-81
IGHD3-10*01                                                                                           14.1    8.3  
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAATACTC	CTATGGT	AACAGGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAATACTCCTATGGTAACAGGGGCTTTTGATATT	ARENTPMVTGAFDI	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	27	24	23	1	0	95.8
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	126	24	16	8	0	66.7
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	245	216	29	0	88.2


Alignments

                                      <-------FR1-IMGT-------><-------CDR1-IMGT------><--------------------FR2-IMGT-------------
                                       L  R  L  S  C  E  A  S  G  F  T  F  R  D  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W 
                    Query_7670   4    CTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTCAGAGATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGGAGTGG  93
V  88.2% (216/245)  IGHV3-48*03  52   ................C.....................TAG.......................................G.........  141
                                       L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W 

                                      --------><-------CDR2-IMGT------><----------------------------------------------------FR3-
                                       L  S  S  I  S  R  F  G  D  T  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  R  N 
                    Query_7670   94   CTTTCATCTATTAGTCGCTTTGGGGACACCATAAATTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACTACAGCAGGAAC  183
V  88.2% (216/245)  IGHV3-48*03  142  G......AC......A.TAG...TAGT......T.C..C.......................................A..GC..A....  231
                                       V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       L  V  Y  L  Q  M  D  G  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  N  T  P  M  V  T  G  A 
                    Query_7670   184  TTAGTCTATCTGCAAATGGACGGCCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGCGAGAGAGAATACTCCTATGGTAACAGGGGCT  273
V  88.2% (216/245)  IGHV3-48*03  232  .C.C.G............A..A.......................G...................-------------------------  296
                                       S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-10*01  7    -------------------------------------------------------------------------.......----------  13
J  97.8% (45/46)    IGHJ3*02     5    ---------------------------------------------------------------------------------------...  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7670   274  TTTGATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  316
J  97.8% (45/46)    IGHJ3*02     8    ........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_339986

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  L  G  K  G 
                    Query_7671   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCGGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCTAGGGAAGGGC  90
V  96.4% (239/248)  IGHV4-31*03  49   ..................................C....A.C.............................C.......C..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  S  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7671   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACTCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  96.4% (239/248)  IGHV4-31*03  139  .....G.........T.C..............................C.........................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_7671   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  96.4% (239/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7671   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_110599

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           339     2e-95
IGHD6-19*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CGGATGGGCCGGGTCGGTGGCG	TAGCAGTGGCTGGTAC	GAACCGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCGGATGGGCCGGGTCGGTGGCGTAGCAGTGGCTGGTACGAACCGTACTACTTTGACTAC	AKADGPGRWRSSGWYEPYYFDY	240	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	239	114	109	2	3	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	249	235	11	3	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7672   1    GGTCCCTGAGACTCTCCTGTGCCGCCTCTGGATTCACCTTTAGCTTCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  94.4% (235/249)  IGHV3-23*01  47   ......................A.....................AG.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  A  N  S  D  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  
                    Query_7672   91   AGTGGGTCTCATCTATTAGTGCTAATAGTGATAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACATTTCCA  180
V  94.4% (235/249)  IGHV3-23*01  137  ...........G.........G..G.G...G.....................................................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N     L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  D  G  P  G  R  W  
                    Query_7672   181  AGAAC---TTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGCGGATGGGCCGGGTCGGTGGC  267
V  94.4% (235/249)  IGHV3-23*01  227  .....ACGC............................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -CDR3-IMGT--------------------------->                                  
                                      R  S  S  G  W  Y  E  P  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7672   268  GTAGCAGTGGCTGGTACGAACCGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  100.0% (16/16)   IGHD6-19*01  6    -................-------------------------------------------------------  21
J  100.0% (48/48)   IGHJ4*02     1    ------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_110598

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_7673   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_7673   91   GAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ...................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_7673   181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7673   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_339983

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           364     5e-103
IGHD3-3*01                                                                                            44.9    5e-09 
IGHJ4*02                                                                                              60.3    2e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCCCG	ACGATTTTTGGAGTGGTTATTAT	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCCCGACGATTTTTGGAGTGGTTATTATCTTGACCAG	ARGPDDFWSGYYLDQ	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7674   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (240/247)  IGHV3-33*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_7674   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGATTCCA  180
V  97.2% (240/247)  IGHV3-33*01  137  .......................................A...........................................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  T  S  L  K  A  G  D  T  A  V  Y  Y  C  A  R  G  P  D  D  F  W  S  
                    Query_7674   181  AGAACACGCTGTATCTGCAAATGACCAGCCTGAAAGCCGGAGACACGGCTGTGTATTACTGTGCGAGGGGCCCCGACGATTTTTGGAGTG  270
V  97.2% (240/247)  IGHV3-33*01  227  ........................A........G.....AG..........................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (23/23)   IGHD3-3*01   6    ---------------------------------------------------------------------------...............  20

                                      ---------------->                                
                                      G  Y  Y  L  D  Q  W  G  Q  G  T  L  V  S  V  S  S
                    Query_7674   271  GTTATTATCTTGACCAGTGGGGCCAGGGAACCCTGGTCAGCGTCTCCTC  319
D  100.0% (23/23)   IGHD3-3*01   21   ........-----------------------------------------  28
J  92.5% (37/40)    IGHJ4*02     7    ---------.....T.C......................C.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_339982

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           360     1e-101
IGHD6-13*01                                                                                           18.0    0.55  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CACG	AGCAGCTGG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACACGAGCAGCTGGATTGACTAC	ARDTSSWIDY	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	237	7	0	97.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_7675   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  97.1% (237/244)  IGHV4-59*01  50   .....TCC...A..............................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_7675   94   GGATTGGGTATATCTATTACACTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCAGTAGACACGTCCAAGAACC  183
V  97.1% (237/244)  IGHV4-59*01  140  .....................G.............................................A......................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------CDR3-IMGT--------->    
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  S  S  W  I  D  Y  W  
                    Query_7675   184  AGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACACGAGCAGCTGGATTGACTACTGGG  273
V  97.1% (237/244)  IGHV4-59*01  230  ..................G.............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (9/9)     IGHD6-13*01  10   --------------------------------------------------------------------.........-------------  18
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------------------------------------............  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_7675   274  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (42/42)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_339980

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_7676  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01  49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_7676  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01  139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_7676  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01  229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01  13   ----------------------------------------------------------------------.....C..G...--------  24

                                     ----------->                                  
                                      G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_7676  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02    6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_110593

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD1-26*01                                                                                           14.1    9.3   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGG	TAGTGGG	CAATACAGTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCT	ARGGSGQYSAYFGS	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  I  S  D
                    Query_7677   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCATCTGGATACAGCTTTATCAGTGA  90
V  92.4% (267/289)  IGHV5-51*01  6    .............................A....................A..............GT................C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  R  K  G  L  D  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  S  P
                    Query_7677   91   CTGGATCGGCTGGGTGCGCCAGAAGCCCAGGAAAGGCCTGGACTGGATGGGGGTCATTTATCCTGGTGACTCTGAAACCAGATATAGTCC  180
V  92.4% (267/289)  IGHV5-51*01  96   .......................T....G.............G.........A....C.................T........C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  T  D  K  S  I  T  T  A  Y  L  Q  W  T  S  L  K  A  S  D  T  A
                    Query_7677   181  GTCCTTCCAAGGCCAGGTCACCATTTCAACCGACAAGTCCATCACCACCGCCTACCTGCAGTGGACCAGCCTGAAGGCCTCGGACACCGC  270
V  92.4% (267/289)  IGHV5-51*01  186  ........................C...G...............G....................G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  F  C  A  R  G  G  S  G  Q  Y  S  A  Y  F  G  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7677   271  CATATACTTCTGTGCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  92.4% (267/289)  IGHV5-51*01  276  ...G..T.A..........----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD1-26*01  5    ------------------------.......----------------------------------------------------------  11
J  93.6% (44/47)    IGHJ4*02     2    ------------------------------------------........A..AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_110592

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           341     5e-96
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGATGGA	ATTACTAT	CAAACGAAGCA	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCGATGGAATTACTATCAAACGAAGCAATGGTTTTGATATA	TRGDGITIKRSNGFDI	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_7678   1    GGTCCCTGAGACTTTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGGCTTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  94.3% (232/246)  IGHV3-53*01  47   .............C..................................A.......AGC......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_7678   91   AGTGGGTCTCAGTTATTTACAGCGGTGGTACCACATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.3% (232/246)  IGHV3-53*01  137  ...................T..........G........A..................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  L  Y  Y  C  T  R  G  D  G  I  T  I  K  R  
                    Query_7678   181  ACACGCTGTATCTTCAAATGCACAGCCTGAGAGCCGACGACACGGCCCTGTACTACTGTACGAGAGGCGATGGAATTACTATCAAACGAA  270
V  94.3% (232/246)  IGHV3-53*01  227  ....................A................G.........G....T......G......------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  3    --------------------------------------------------------------------------........--------  10

                                      ---------------->                                  
                                      S  N  G  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7678   271  GCAATGGTTTTGATATATGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  321
J  93.8% (45/48)    IGHJ3*02     3    ---...C.........C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_110590

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_7679   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_7679   91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_7679   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_7679   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_110597

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           321     6e-90
IGHD3-16*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	GGTGGAAATTA	TTTGGGG	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGTGGAAATTATTTGGGGGGTATGGACGTC	AGGNYLGGMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  Y  Y  T  M  Y  W  V  R  Q  V  P  G  R  G  L  
                    Query_7680   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATTATTATACCATGTACTGGGTCCGTCAAGTTCCGGGGAGGGGTCTGG  90
V  91.8% (225/245)  IGHV3-43*01  47   ............................................G...........C...............C........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  I  S  W  D  G  E  T  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  G  
                    Query_7680   91   AGTGGGTCTCTCTTATTAGTTGGGATGGTGAGACTACAGACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACACCGGCA  180
V  91.8% (225/245)  IGHV3-43*01  137  ..............................GT.GC...T.............................................A.A...  226
                                      E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  R  S  L  F  L  Q  M  N  S  L  I  S  E  D  T  A  L  Y  Y  C  A  G  G  N  Y  L  G  G  M  
                    Query_7680   181  AAAGGTCCCTCTTTCTGCAGATGAACAGTCTGATAAGTGAAGACACCGCCTTATATTACTGTGCAGGTGGAAATTATTTGGGGGGTATGG  270
V  91.8% (225/245)  IGHV3-43*01  227  ...AC.....G.A......A.............G..C...G...........G............-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  15   ----------------------------------------------------------------------------.......-------  21
J  97.8% (44/45)    IGHJ6*02     18   -----------------------------------------------------------------------------------.......  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7680   271  ACGTCTGGGGCCAAGGGACAACGGTCACCGTCTCCTCA  308
J  97.8% (44/45)    IGHJ6*02     25   ...................C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_110596

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            343     2e-96
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAA	GGCAGGGCC	CGGTGACTAC	GGCGGGTCCA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGGCAGGGCCCGGTGACTACGGCGGGTCCAACTTTGACTGC	AKAGPGDYGGSNFDC	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  Y  D  Y  V  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7681   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTTATGATTATGTCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  94.3% (233/247)  IGHV3-9*01   47   .........................................G.........C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  Y  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7681   91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGGTTACATAGGATATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  94.3% (233/247)  IGHV3-9*01   137  ................................AG......C................................................A  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      G  N  S  L  Y  L  E  M  N  S  L  T  L  E  D  T  A  L  Y  Y  C  A  K  A  G  P  G  D  Y  G  
                    Query_7681   181  GGAACTCCCTGTATCTGGAAATGAACAGTCTGACGCTGGAAGACACGGCCTTGTATTACTGTGCAAAGGCAGGGCCCGGTGACTACGGCG  270
V  94.3% (233/247)  IGHV3-9*01   227  A................C...............GAGCT..G..........................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (10/10)   IGHD4-17*01  7    ----------------------------------------------------------------------------..........----  16

                                      ---------------->                                 
                                      G  S  N  F  D  C  W  G  Q  G  T  L  V  P  V  S  S 
                    Query_7681   271  GGTCCAACTTTGACTGCTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCA  320
J  95.5% (42/44)    IGHJ4*02     4    ------.........A......................A...........  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_339989

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*03                                                                                           344     6e-97
IGHD2-8*01                                                                                            21.8    0.042
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*03	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCCTGG	ATTGCACTGATGGTGTCTGTTAT	GCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATCGCCTGGATTGCACTGATGGTGTCTGTTATGCTTTTGACCAA	VKDRLDCTDGVCYAFDQ	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  N  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7682   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACATTCAGTAACTATGCTATGCACTGGGTCCGCCAGGCTCCTGGGAAGGGACTGG  90
V  94.0% (235/250)  IGHV3-64*03  47   .....................................C.......G..............................A.............  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  P  N  G  G  S  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7682   91   AATATGTTTCAGCGATTAGTCCTAATGGAGGTAGTACATACTTCGCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-64*03  137  .............T......AG......G.....C.......A...............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  D  R  L  D  C  T  D  
                    Query_7682   181  GGAACACTCTATATCTCCAAATGAGCAGTCTGAGAGCTGAGGACACGGCTCTCTATTACTGTGTGAAAGATCGCCTGGATTGCACTGATG  270
V  94.0% (235/250)  IGHV3-64*03  227  A......G..G...G...................................G.G.................--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  82.6% (19/23)    IGHD2-8*01   6    ------------------------------------------------------------------------------....T...A...  17

                                      GT-------------------->                                  
                                      G  V  C  Y  A  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7682   271  GTGTCTGTTATGCTTTTGACCAATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  82.6% (19/23)    IGHD2-8*01   18   ....A..C...----------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    --------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_339988

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            339     1e-95
IGHJ2*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	N/A	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	GCACGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCACGGATCCTGGTGCTTCGATTTC	ARHGSWCFDF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  E  A  S  G  F  T  F  N  T  Y  W  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_7683  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAATACCTACTGGATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-7*03  47   .....................C....................G..G...T......A.................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  T  D  G  S  T  Q  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_7683  91   AGTGGGTGGCCAACATAAAGACAGATGGAAGTACTCAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACCCCA  180
V  93.9% (232/247)  IGHV3-7*03  137  ....................CA..........GAGA..................................................G...  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                     T  N  S  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  H  G  S  W  C  F  D  
                    Query_7683  181  CGAACTCACTGTATTTGCAACTGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGGCACGGATCCTGGTGCTTCGATT  270
V  93.9% (232/247)  IGHV3-7*03  227  A.............C.....A..............................................-----------------------  293
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  92.0% (46/50)    IGHJ2*01    4    ----------------------------------------------------------------------------.....A.......C  17

                                     ->                                  
                                     F  W  S  R  G  T  L  V  S  V  S  S  
                    Query_7683  271  TCTGGAGCCGTGGCACCCTGGTCAGTGTCTCCTCAG  306
J  92.0% (46/50)    IGHJ2*01    18   .....G..................C...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_193934

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     3e-91
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATATA	CTACGATT	GTTCAAGGC	TCGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATATATACTACGATTGTTCAAGGCTCGAGCCC	AKDIYYDCSRLEP	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  R  G  L  
                    Query_7684   1    GGTCCCTGAGACTCTCCTGTGCAACGTCTGGATTCACCTTTAGCAACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGC  90
V  91.6% (229/250)  IGHV3-23*01  47   .......................G.C...................G...........G.......................A.......G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  C  I  S  G  G  G  E  T  T  H  Y  R  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7684   91   AGTGGGTCTCATGTATTAGTGGTGGTGGTGAAACAACACACTACAGAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.6% (229/250)  IGHV3-23*01  137  ...........GC..........A......GT.GC...T.....GC............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      M  D  T  L  Y  L  Q  M  H  G  L  R  A  E  D  T  A  I  Y  Y  C  A  K  D  I  Y  Y  D  C  S  
                    Query_7684   181  TGGACACGCTGTATCTGCAAATGCACGGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGATATATACTACGATTGTTCAA  270
V  91.6% (229/250)  IGHV3-23*01  227  A.A....................A..A.......................G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD5-12*01  14   ----------------------------------------------------------------------------........------  21

                                      ---------->                                  
                                      R  L  E  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7684   271  GGCTCGAGCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ5*02     10   ---....C.....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_156814

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           414     5e-118
IGHD6-19*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCCTTAGGGTC	TATAGCAGTGGCTGGTAC	TC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCCTTAGGGTCTATAGCAGTGGCTGGTACTCTTGGCTAC	ARVPLGSIAVAGTLGY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  A  F  T  N  Y 
                    Query_7685   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACGCCTTTACCAATTAT  91
V  95.8% (277/289)  IGHV1-18*01  7    ...........................................................................A.........GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  V  F  N  G  N  T  R  H  A  L 
                    Query_7685   92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCAGCGTTTTCAATGGTAACACAAGACATGCACTG  181
V  95.8% (277/289)  IGHV1-18*01  97   ........C.........................................A..........C..A..............ACT......A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  N  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_7685   182  AAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAACACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.8% (277/289)  IGHV1-18*01  187  ...........................................G..............................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  V  P  L  G  S  I  A  V  A  G  T  L  G  Y  W  G  Q  G  T  L  V  I  V  S 
                    Query_7685   272  GTGTATTACTGTGCGAGAGTTCCCTTAGGGTCTATAGCAGTGGCTGGTACTCTTGGCTACTGGGGCCAGGGAACCCTGGTCATTGTCTCC  361
V  95.8% (277/289)  IGHV1-18*01  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (18/18)   IGHD6-19*01  4    --------------------------------..................----------------------------------------  21
J  92.9% (39/42)    IGHJ4*02     7    ----------------------------------------------------...A..........................CC......  44

                                          
                                       S  
                    Query_7685   362  TCAG  365
J  92.9% (39/42)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_156815

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCAC	ARSGSGNYEGWLDH	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  H  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7686   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACCACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  92.1% (223/242)  IGHV4-59*01  49   ..........................................AG....T.........................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  K  S  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_7686   91   TGGATTGGATATATCTTCTACAGTGGCAAATCCAAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACATCCAAGAAG  180
V  92.1% (223/242)  IGHV4-59*01  139  ........G.......AT........G.GCA....C............................................G........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  L  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_7686   181  CAGTTGTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  92.1% (223/242)  IGHV4-59*01  229  .....C.......A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  93.6% (44/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  H  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_7686   271  CTCGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  313
J  93.6% (44/47)    IGHJ5*02     9    T......C...............................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_156816

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD1-26*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GTTCCGTAGG	AGTGGGAGCTACTAC	ACTTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGTTCCGTAGGAGTGGGAGCTACTACACTTTGGTACTTTGACTAC	AKGSVGVGATTLWYFDY	239	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	24	0	0	100
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	22	2	0	91.7
FR3-IMGT	125	238	114	112	2	0	98.2
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	231	226	5	0	97.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  M  G  L  E  W  V  S  A  I  
                    Query_7687   15   GTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGATGGGGCTGGAGTGGGTCTCAGCTATTA  104
V  97.8% (226/231)  IGHV3-23*01  65   ...............................................................A..........................  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  R  S  T  Y  Y  A  D  S  V  K  G  R  F  T  F  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_7687   105  GTGGTAGTGGTCGCAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCTTCTCCAGAGACAATTCCAAGAACACGCTGTATCTGC  194
V  97.8% (226/231)  IGHV3-23*01  155  ...........G.T.......................................A....................................  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------------CDR3-IMGT----------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  S  V  G  V  G  A  T  T  L  W  Y  F  
                    Query_7687   195  AAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAAGGTTCCGTAGGAGTGGGAGCTACTACACTTTGGTACTTTG  284
V  97.8% (226/231)  IGHV3-23*01  245  ..................................A................---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (15/15)   IGHD1-26*01  6    -------------------------------------------------------------...............--------------  20
J  100.0% (46/46)   IGHJ4*02     3    -----------------------------------------------------------------------------------.......  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7687   285  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  323
J  100.0% (46/46)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_156817

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           366     2e-103
IGHD1-1*01                                                                                            12.2    32    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTAC	AEEKRRVPRGTFHY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7688   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-23*01  47   ................................T.........G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  
                    Query_7688   91   AGTGGGTCTCAGCCATTAGTGGTGGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGA  180
V  96.8% (242/250)  IGHV3-23*01  137  .............T.........A......................................................G.........C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  
                    Query_7688   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGG  270
V  96.8% (242/250)  IGHV3-23*01  227  .................................................................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------------------------......------------  17

                                      ------------->                                  
                                      G  T  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7688   271  GAACCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (43/44)    IGHJ4*02     5    ----....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_156810

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           336     1e-94
IGHD2-21*02                                                                                           18.0    0.58 
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGGAACCGGA	GGTGGCGACTGC	CTT	GACCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGGAACCGGAGGTGGCGACTGCCTTGACCCC	ARAGTGGGDCLDP	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7689   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGCTTCAGTACCTATGGCATGCATTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-33*01  47   ....................................C........G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  R  F  D  G  T  Y  K  K  Y  A  D  F  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7689   91   AGTGGGTGGCAGTTATACGGTTTGATGGAACTTATAAAAAATATGCAGACTTCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.2% (232/249)  IGHV3-33*01  137  .................T...A........G.A.....T.C..........C......................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  D  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  R  A  G  T  G  G  G  D  
                    Query_7689   181  AGAACACCCTCTATCTGGACATGAACAGCCTGAGAGTCGAGGATACGGCTGTGTATTTCTGTGCGAGAGCCGGAACCGGAGGTGGCGACT  270
V  93.2% (232/249)  IGHV3-33*01  227  .......G..G......C.A................C......C.............A...........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD2-21*02  11   --------------------------------------------------------------------------------.....T....  20

                                      ---------->                                  
                                      C  L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7689   271  GCCTTGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
D  91.7% (11/12)    IGHD2-21*02  21   ..-------------------------------------------  22
J  100.0% (40/40)   IGHJ5*02     12   -----........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_312509

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            335     4e-94
IGHD3-22*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TCG	TTACTTTGATGGAAATGGTTA	CTCCGTGCTGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATCGTTACTTTGATGGAAATGGTTACTCCGTGCTGAACTAC	ARDRYFDGNGYSVLNY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7690   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTTTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-7*03   47   ..............................................C.A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  Y  Q  D  G  T  G  Q  N  Y  V  A  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_7690   91   AGTGGGTGGCCAACATATACCAAGATGGAACTGGACAAAACTATGTGGCCTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  92.8% (232/250)  IGHV3-7*03   137  .................A.G..........G..AGA..T.........A......................A..................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  L  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  R  D  R  Y  F  D  G  N  
                    Query_7690   181  AGAACTTATTGTTTCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTGTACTTCTGTGCGAGGGATCGTTACTTTGATGGAAATG  270
V  92.8% (232/250)  IGHV3-7*03   227  ......C.C...A.......................C..................T.A.........A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  81.0% (17/21)    IGHD3-22*01  4    -------------------------------------------------------------------------.....A....A.T.G..  20

                                      T------------------>                                  
                                      G  Y  S  V  L  N  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7690   271  GTTACTCCGTGCTGAACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  324
D  81.0% (17/21)    IGHD3-22*01  21   ....--------------------------------------------------  24
J  97.4% (38/39)    IGHJ4*02     10   ---------------...................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_156812

Length=407
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           422     3e-120
IGHD7-27*01                                                                                           14.1    10.0  
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTCTCTACAGAACCGTCCTATGGGACA	CTAACTG	TGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCC	ARDPFSTEPSYGTLTVRFDP	289	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	283	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_7691   1    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  90
V  95.6% (283/296)  IGHV1-18*01  1    .....T.....G..............................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  P  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  D  T  N  Y 
                    Query_7691   91   AACTATCCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTGACACAAATTAT  180
V  95.6% (283/296)  IGHV1-18*01  91   .G....GG..........................................................G...........A.......C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  D  L  R  S  L  T  S  D  D 
                    Query_7691   181  GCACAGAAGTTCCAGGGCAGAGTCACCTTGACCACAGACACGTCCACGAGCACAGCCTACATGGACCTGAGGAGCCTGACATCTGACGAC  270
V  95.6% (283/296)  IGHV1-18*01  181  .........C.................A.............A.......................G.............G..........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  V  Y  Y  C  A  R  D  P  F  S  T  E  P  S  Y  G  T  L  T  V  R  F  D  P  W  G  Q  G 
                    Query_7691   271  ACGGCCGTGTATTACTGTGCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCCTGGGGCCAGGGA  360
V  95.6% (283/296)  IGHV1-18*01  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD7-27*01  1    ---------------------------------------------------------.......--------------------------  7
J  97.8% (44/45)    IGHJ5*02     7    -------------------------------------------------------------------.......................  29

                                                            
                                       T  L  V  T  V  S  T  
                    Query_7691   361  ACCCTGGTCACCGTCTCCACAG  382
J  97.8% (44/45)    IGHJ5*02     30   ..................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39867768


Query= Query_312504

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           353     9e-100
IGHD6-19*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGGA	AGCAGTGG	N/A	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGGAAGCAGTGGCTATTACCACGGTATGGACGTC	ARSGSSGYYHGMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7692   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGGAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (237/248)  IGHV3-33*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  T  N  E  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  E  N  S  
                    Query_7692   91   AGTGGGTGGCCGTTATATGGTATGATGGAACTAATGAACATTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGAGAATTCCA  180
V  95.6% (237/248)  IGHV3-33*01  137  ..........A...................G....A..T.C....C....................................C.......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  S  G  S  S  G  Y  Y  
                    Query_7692   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGATCGGGAAGCAGTGGCTATTACC  270
V  95.6% (237/248)  IGHV3-33*01  227  ....................................C...............G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  7    --------------------------------------------------------------------------........--------  14
J  94.5% (52/55)    IGHJ6*02     8    ----------------------------------------------------------------------------------...C...T  15

                                      ------------->                                 
                                      H  G  M  D  V  W  G  Q  G  T  T  V  T  V  P  S 
                    Query_7692   271  ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCCCCTCA  317
J  94.5% (52/55)    IGHJ6*02     16   .........................................T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_312505

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	276	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_7693   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  96.5% (276/286)  IGHV5-51*01  6    ..................................................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_7693   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  96.5% (276/286)  IGHV5-51*01  96   ......................A.......G.............G..........................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_7693   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAGCACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  96.5% (276/286)  IGHV5-51*01  186  ....................C...................A...........................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7693   271  CGTGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.5% (276/286)  IGHV5-51*01  276  .A..............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_312506

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           286     1e-79
IGHD3-16*02                                                                                           14.1    8.6  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGACGCT	GGAGTAATCG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGACGCTGGAGTAATCGACTACTACGGTATGGACGTC	AREDAGVIDYYGMDV	250	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	135	27	18	3	6	66.7
FR3-IMGT	136	249	114	94	20	0	82.5
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	222	29	6	86.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  S  Y  Y  W  T  W  I  R  Q  R  P  G  K  G 
                    Query_7694   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGTGGTTCTTACTACTGGACGTGGATCCGCCAGCGCCCAGGGAAGGGC  90
V  86.4% (222/257)  IGHV4-31*03  49   ...............................G................GG...........GC.............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  N  N  R  G  S  P  D  F  N  P  S  L  M  G  R  T  V  I  S  L  D 
                    Query_7694   91   CTGGAGTGGATTGGGTACATCTATAACAATAATAGAGGGAGCCCCGACTTCAATCCGTCCCTCATGGGTCGGACTGTCATCTCTCTAGAC  180
V  86.4% (222/257)  IGHV4-31*03  139  ........................T..------..T......A..T...A...C..........A.A....AGT.AC...A..AG.....  222
                                       L  E  W  I  G  Y  I  Y  Y        S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-----------------CDR
                                       T  S  N  N  L  F  Y  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  E  D  A  G  V 
                    Query_7694   181  ACTTCTAATAACCTGTTCTACCTGAGGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGAGGACGCTGGAGTA  270
V  86.4% (222/257)  IGHV4-31*03  223  ..G.....G....A.....C.....A.....G................................A............-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  90.0% (9/10)     IGHD3-16*02  21   ------------------------------------------------------------------------------------.....T  26

                                      3-IMGT----------------->                                 
                                       I  D  Y  Y  G  M  D  V  R  G  Q  G  I  T  V  T  V  S  S 
                    Query_7694   271  ATCGACTACTACGGTATGGACGTCCGGGGCCAAGGGATCACGGTCACCGTCTCCTCA  327
D  90.0% (9/10)     IGHD3-16*02  27   ....-----------------------------------------------------  30
J  96.2% (51/53)    IGHJ6*02     10   ----....................T............C...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_312507

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7695   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_7695   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_7695   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7695   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_312501

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGTGAGGAAGGA	TACTATGATACTAGTGGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGTGAGGAAGGATACTATGATACTAGTGGTTATTCGGACTAT	AKDGEEGYYDTSGYSDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  T  P  G  K  G  L  
                    Query_7696   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGATATGCCATGTCCTGGGTCCGCCAGACTCCAGGGAAGGGCCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ...........................................C..C.........AG.............G.............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  V  S  G  S  G  G  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7696   91   AGTGGGTCTCAACAGTGAGTGGTAGTGGAGGTGGCACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  ...........G.TA.T...........T...A..........C..............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  I  Y  Y  C  A  K  D  G  E  E  G  Y  Y  
                    Query_7696   181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAACCGAGGACACGGCCATATATTACTGTGCGAAAGATGGTGAGGAAGGATACTATG  270
V  93.6% (234/250)  IGHV3-23*01  227  ..............C....................G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.5% (21/22)    IGHD3-22*01  5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                      D  T  S  G  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7696   271  ATACTAGTGGTTATTCGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.5% (21/22)    IGHD3-22*01  12   ...G...........------------------------------------------  26
J  97.5% (39/40)    IGHJ4*02     9    -----------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_312502

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_7697   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  98.3% (284/289)  IGHV5-51*03  6    ..............................................................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_7697   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ...................................................G............................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7697   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7697   271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  351
V  98.3% (284/289)  IGHV5-51*03  276  ...................--------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                               
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........---------------------------------------------  18
J  100.0% (39/39)   IGHJ4*02     8    ------------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_312503

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            319     2e-89
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTAGTAACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTAGTAACACCTGGTACTCGGGGTTTTGATTCC	AGHLVTPGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	225	21	0	91.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_7698   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  91.5% (225/246)  IGHV4-4*01   49   ........................................G..GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  A  E  I  H  H  G  G  P  T  N  Y  N  P  A  L  E  S  R  V  T  I  S  V  D  K  S  N 
                    Query_7698   91   GAGTGGATAGCGGAAATCCATCATGGTGGACCCACCAACTACAACCCGGCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAC  180
V  91.5% (225/246)  IGHV4-4*01   139  ........T.G.......T.....A....GAG................T.....A..................................G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  S  L  S  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_7698   181  AACCAATTCTCCCTGAGCCTGAGCTCTCTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATCTAGTAACACCTGGTACTCGG  270
V  91.5% (225/246)  IGHV4-4*01   229  .....G..........AG.........G...........................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7698   271  GGTTTTGATTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.3% (41/43)    IGHJ4*02     6    ---.....C.A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_267712

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           294     6e-82
IGHD1-26*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGTGAGA	GGGAGCTA	TTGTGGGGAGCAGTCAACGAGGATTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGTGAGAGGGAGCTATTGTGGGGAGCAGTCAACGAGGATTGCTTTGACTCC	ARDSERELLWGAVNEDCFDS	230	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	47	4	0	92.2
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	105	9	0	92.1
CDR3-IMGT (germline)	230	237	8	7	1	0	87.5
Total	N/A	N/A	224	206	18	0	92


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  I  N  H  A  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  G  S 
                    Query_7699   14   TCTGGATTCACCTTTATCAACCATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCGAGTATAAGTGGTAGT  103
V  92.0% (206/224)  IGHV3-23*01  73   ................G..G.T.........G..........................................AGC...T.........  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  T  K  R  T  M  Y  L  Q  M  N 
                    Query_7699   104  GGTGGTAGCACATACTACGCAGATTCCGTCAAGGGCCGGTTCACCATCTCCAGAGACATTACCAAGAGGACGATGTATCTGCAAATGAAC  193
V  92.0% (206/224)  IGHV3-23*01  163  .......................C.....G............................A.T......AC...C.................  252
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><-------------------------CDR3-IMGT-------------------
                                       S  L  R  D  D  D  T  A  V  Y  Y  C  A  R  D  S  E  R  E  L  L  W  G  A  V  N  E  D  C  F 
                    Query_7699   194  AGCCTGAGAGACGACGACACGGCCGTATATTACTGTGCGAGAGATAGTGAGAGGGAGCTATTGTGGGGAGCAGTCAACGAGGATTGCTTT  283
V  92.0% (206/224)  IGHV3-23*01  253  ..........C...G.........................A...----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  100.0% (8/8)     IGHD1-26*01  9    ----------------------------------------------------........------------------------------  16
J  95.2% (40/42)    IGHJ4*02     5    --------------------------------------------------------------------------------------....  8

                                      ----->                                
                                       D  S  W  G  Q  G  S  L  V  T  V  S  S
                    Query_7699   284  GACTCCTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTC  321
J  95.2% (40/42)    IGHJ4*02     9    ....A..............C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_126315

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            343     2e-96
IGHD2-21*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	T	AGCATATTTTGG	GGACCAAAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGTAGCATATTTTGGGGACCAAAGTGACTTC	TRVAYFGDQSDF	239	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	49	2	0	96.1
CDR2-IMGT	101	124	24	24	0	0	100
FR3-IMGT	125	238	114	112	2	0	98.2
CDR3-IMGT (germline)	239	245	7	6	1	0	85.7
Total	N/A	N/A	231	225	6	0	97.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  G  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  
                    Query_7700   15   GTGCAGCCTCTGGATTCACCTTTAGTGGCTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAATATAA  104
V  97.4% (225/231)  IGHV3-7*01   65   ..........................A............G.............................................C....  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      K  Q  D  G  S  E  K  K  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_7700   105  AGCAAGATGGAAGTGAGAAAAAATATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGC  194
V  97.4% (225/231)  IGHV3-7*01   155  ....................T.C...................................................................  244
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-------------CDR3-IMGT------------>          
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  V  A  Y  F  G  D  Q  S  D  F  W  G  Q  
                    Query_7700   195  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTACGAGAGTAGCATATTTTGGGGACCAAAGTGACTTCTGGGGCCAGG  284
V  97.4% (225/231)  IGHV3-7*01   245  ............................................G......---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  91.7% (11/12)    IGHD2-21*01  1    ----------------------------------------------------........G...--------------------------  12
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------.....A...........  24

                                                              
                                      G  T  L  V  T  V  S  S  
                    Query_7700   285  GAACCCTGGTCACCGTCTCCTCAG  308
J  97.6% (40/41)    IGHJ4*02     25   ........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_126316

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           350     8e-99
IGHD2-21*01                                                                                           12.2    33   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTTCTTTGGCGATTTCGA	CTATTC	GGGCCCCCTATCCACCCCACA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTCTTTGGCGATTTCGACTATTCGGGCCCCCTATCCACCCCACAAC	ARLSLAISTIRAPYPPHN	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  A  S  I  S  G  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_7701   1    ACCCTGTCCCTCACCTGCTCTGTTTCTGGTGCCTCCATCAGTGGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  94.8% (237/250)  IGHV4-39*01  49   ..................A....C.......G.........CA..............................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S 
                    Query_7701   91   CTGGAGTGGATAGGGACTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGGGTCGAGTCACCATATCCGTAGACACGTCC  180
V  94.8% (237/250)  IGHV4-39*01  139  ...........T....G...........................................A.............................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  D  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  S  L  A  I  S  T 
                    Query_7701   181  AAGGACCAGTTCTCCCTGAAACTGAACTCTGTGACCGCCGCAGACACGGCTCTGTATTACTGTGCGAGACTTTCTTTGGCGATTTCGACT  270
V  94.8% (237/250)  IGHV4-39*01  229  ...A................G....G.........................G..................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-21*01  22   ----------------------------------------------------------------------------------------..  23

                                      -IMGT--------------------->                                  
                                       I  R  A  P  Y  P  P  H  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7701   271  ATTCGGGCCCCCTATCCACCCCACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  100.0% (6/6)     IGHD2-21*01  24   ....---------------------------------------------------------  27
J  100.0% (36/36)   IGHJ4*02     13   -------------------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_126317

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           333     1e-93
IGHD3-10*01                                                                                           39.1    3e-07
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	G	ACTATGGAACGGGGAGTTATTATAAC	AAGACCC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACTATGGAACGGGGAGTTATTATAACAAGACCCATGGACGTC	AKTMERGVIITRPMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  S  F  S  H  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7702   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCAGCTTCAGTCACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.1% (230/247)  IGHV3-30*18  47   ........................C...........C.......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  V  Y  D  E  S  F  K  S  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7702   91   AGTGGGTGGCAGTTATAGTATATGATGAAAGTTTTAAATCTTACGCAGCCTCCGTGAAGGGCCGATTTACCATCTCCAGAGACAATTCCA  180
V  93.1% (230/247)  IGHV3-30*18  137  .................TC........G....AA.....AC..T....A..................C......................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  K  T  M  E  R  G  V  I  
                    Query_7702   181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGATGAGGACACGGCTGTGTATTATTGTGCGAAGACTATGGAACGGGGAGTTATTA  270
V  93.1% (230/247)  IGHV3-30*18  227  ...A................................C.....................C........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.3% (24/26)    IGHD3-10*01  6    --------------------------------------------------------------------.......TT.............  27

                                      T------------------>                                 
                                      I  T  R  P  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7702   271  TAACAAGACCCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  323
D  92.3% (24/26)    IGHD3-10*01  28   ....-------------------------------------------------  31
J  97.6% (41/42)    IGHJ6*02     21   -----------......................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_126310

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.043
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7703   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7703   91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_7703   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7703   271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_32833

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           422     2e-120
IGHD3-16*01                                                                                           12.2    37    
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGA	AATTGGTAACACCTAATTGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTC	ARRGKLVTPNWDYGMDV	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	294	282	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_7704   1    CAGATGCAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  90
V  95.9% (282/294)  IGHV1-18*04  1    ...G.T...................C................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  C  Y  N  G  N  T  K  Y 
                    Query_7704   91   AACTACGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGTTGTTACAATGGTAACACAAAGTAT  180
V  95.9% (282/294)  IGHV1-18*04  91   .G...............................................................CGC..................C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  L  K  H  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_7704   181  GCACTGAAGCACCAGGGCAGAGTCACCATGACCACAGACACATCGACGAGCACAGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGAC  270
V  95.9% (282/294)  IGHV1-18*04  181  ....A.....T.................................C..............C..............................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><--------------------CDR3-IMGT-------------------->                     
                                       T  A  V  Y  Y  C  A  R  R  G  K  L  V  T  P  N  W  D  Y  G  M  D  V  W  G  Q  G  T  T  V 
                    Query_7704   271  ACGGCCGTGTATTACTGTGCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTC  360
V  95.9% (282/294)  IGHV1-18*04  271  ........................------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD3-16*01  18   -------------------------......-----------------------------------------------------------  23
J  100.0% (50/50)   IGHJ6*02     13   ----------------------------------------------------......................................  50

                                                  
                                       T  V  S  S 
                    Query_7704   361  ACCGTCTCCTCA  372
J  100.0% (50/50)   IGHJ6*02     51   ............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_32830

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAA	ACGAAT	TATGAAAGTA	CTGCGGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAACGAATTATGAAAGTACTGCGGGGCTTGACTTC	AKTNYESTAGLDF	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7705   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGCAGCTATGGCATGAGCTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  93.5% (232/248)  IGHV3-23*01  47   ....................................C..............C.....................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  I  N  G  I  G  S  S  T  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_7705   91   AGTGGGTCTCACTTATTAATGGTATCGGAAGTAGCACGCACTACGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCA  180
V  93.5% (232/248)  IGHV3-23*01  137  ...........GC.....G.....GT..TG.......AT.........................G......A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  T  N  Y  E  S  T  A  
                    Query_7705   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTATATTACTGTGCAAAAACGAATTATGAAAGTACTGCGG  270
V  93.5% (232/248)  IGHV3-23*01  227  ....................................C...........................G...----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (9/10)     IGHD3-22*01  8    --------------------------------------------------------------------------.....T....------  17

                                      ---------->                                  
                                      G  L  D  F  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_7705   271  GGCTTGACTTCTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  315
J  95.2% (40/42)    IGHJ4*02     7    ---......A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_32831

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           305     3e-85
IGHD3-10*01                                                                                           12.2    30   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	N/A	GGGGAG	ATGGCCCCATTGCAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGGGAGATGGCCCCATTGCAATTGACTAC	AKGGDGPIAIDY	233	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	9	19	11	9	2	0	81.8
CDR1-IMGT	20	43	24	21	3	0	87.5
FR2-IMGT	44	94	51	49	2	0	96.1
CDR2-IMGT	95	118	24	21	3	0	87.5
FR3-IMGT	119	232	114	106	8	0	93
CDR3-IMGT (germline)	233	239	7	7	0	0	100
Total	N/A	N/A	231	213	18	0	92.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         E  A  S  G  F  T  F  S  T  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  F  M  
                    Query_7706   9    GTGAAGCCTCCGGATTCACGTTCAGTACCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGTCATTTATGT  98
V  92.2% (213/231)  IGHV3-30*18  65   ...C......T........C.......G.....G..............................................G..G....A.  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  F  D  G  S  S  K  H  Y  A  D  S  V  Q  G  R  F  S  I  S  R  D  N  S  K  N  T  V  Y  L  
                    Query_7706   99   CATTTGATGGAAGTAGTAAACACTATGCAGACTCCGTGCAGGGCCGATTCTCCATCTCCAGAGACAATTCCAAGAACACGGTGTATCTTC  188
V  92.2% (213/231)  IGHV3-30*18  155  ...A...........A....T.................A...........A.............................C.......G.  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------CDR3-IMGT------------>          
                                      Q  M  D  S  L  R  T  E  D  T  A  V  Y  Y  C  A  K  G  G  D  G  P  I  A  I  D  Y  W  G  Q  
                    Query_7706   189  AAATGGACAGCCTGAGAACTGAGGACACGGCTGTGTATTATTGTGCGAAAGGGGGAGATGGCCCCATTGCAATTGACTACTGGGGCCAGG  278
V  92.2% (213/231)  IGHV3-30*18  245  .....A...........G......................C..........---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (6/6)     IGHD3-10*01  16   ---------------------------------------------------......---------------------------------  21
J  97.5% (39/40)    IGHJ4*02     7    ------------------------------------------------------------------------..................  24

                                                            
                                      G  T  L  V  T  V  S  S
                    Query_7706   279  GAACTCTGGTCACCGTCTCCTC  300
J  97.5% (39/40)    IGHJ4*02     25   ....C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_221695

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           361     4e-102
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ2*01                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTACTATAATCCTAGTGGTTTTTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACTATAATCCTAGTGGTTTTTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGFYGYWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	238	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  R  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7707   1    ACCCTGTCCCTCACCTGCACTGTCTCCGGTGGCTCCATGAGTAGGTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (238/245)  IGHV4-59*01  49   ..........................T...........C.....T.............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  D  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7707   91   TGGATTGGGGACATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  97.1% (238/245)  IGHV4-59*01  139  .........T.T..............................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  F  Y 
                    Query_7707   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATTACTATAATCCTAGTGGTTTTTAC  270
V  97.1% (238/245)  IGHV4-59*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.0% (21/25)    IGHD3-22*01  4    -----------------------------------------------------------------.......G..AG........A....  28

                                      -------------------->                                  
                                       G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_7707   271  GGGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  325
J  100.0% (52/52)   IGHJ2*01     2    ---....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_221694

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           347     7e-98
IGHD6-19*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGG	AGCAGTGGCTGGTA	TGATAGG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGAGCAGTGGCTGGTATGATAGGTGACTAT	ARDGAVAGMIGDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7708   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGATATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  94.4% (236/250)  IGHV3-21*01  47   ..............................................C..........................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  G  V  S  N  D  Y  K  Y  Y  A  D  S  L  M  G  R  F  T  I  S  R  D  N  A  
                    Query_7708   91   AGTGGGTCTCATCCATTGGTGTTAGTAATGATTACAAATACTACGCAGATTCACTGATGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-21*01  137  .................A..AG.....G.AG.....T............C...G...A................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  G  A  V  A  G  M  
                    Query_7708   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGAGACGGAGCAGTGGCTGGTATGA  270
V  94.4% (236/250)  IGHV3-21*01  227  ............A.......................C.................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD6-19*01  7    -------------------------------------------------------------------------..............---  20

                                      ---------->                                  
                                      I  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7708   271  TAGGTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (40/41)    IGHJ4*02     8    ----......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_267718

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	273	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_7709   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  95.5% (273/286)  IGHV5-51*01  6    ..................................................A...............T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_7709   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCTTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGACACCAGATACAGTCC  180
V  95.5% (273/286)  IGHV5-51*01  96   ......................A.......G......C......G..............................T...........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  N  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_7709   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  95.5% (273/286)  IGHV5-51*01  186  ....................C...................A...G.......................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        M  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  P  G  T  L  V  T  V  S  S 
                    Query_7709   271  CATGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCA  352
V  95.5% (273/286)  IGHV5-51*01  276  ................------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                   
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     8    ------------------------------------------..............A.........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_267719

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_7710  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01  49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_7710  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01  139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_7710  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01  229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01  13   ----------------------------------------------------------------------.....C..G...--------  24

                                     ----------->                                  
                                      G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_7710  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02    6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_126318

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            333     1e-93
IGHD3-16*01                                                                                           12.2    30   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	N/A	TGGGGG	GGGCGGGATGGCAACCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGGGGGGCGGGATGGCAACCCGACTAC	VGGAGWQPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  L  I  F  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7711   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGACTCATCTTTAGTGACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.8% (228/243)  IGHV3-7*01   47   ....................G...........T...C.......AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  E  Q  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7711   91   AGTGGGTGGCCAACATAGAGCAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.8% (228/243)  IGHV3-7*01   137  .................A....................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  V  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  V  G  G  A  G  W  Q  P  D  
                    Query_7711   181  AGAATTCAGTGTTTCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCTGTGTACTTTTGTGTGGGGGGGGCGGGATGGCAACCCGACT  270
V  93.8% (228/243)  IGHV3-7*01   227  ....C...C...A............C.............................T.AC....---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (6/6)     IGHD3-16*01  17   ---------------------------------------------------------------......---------------------  22
J  100.0% (38/38)   IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                
                                      Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7711   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  304
J  100.0% (38/38)   IGHJ4*02     13   ..................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_221690

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           371     7e-105
IGHD3-16*01                                                                                           12.2    36    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCCTTCTCCCCGGGTCCCCC	TGGGGG	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTTCTCCCCGGGTCCCCCTGGGGGCCCTTTGACTCT	ARTLLPGSPWGPFDS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	63	7	0	90
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	263	26	0	91


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  E  S  G  A  A  V  R  R  P  G  E  S  L  T  I  S  C  Q  G  S  G  Y  R  V  P  T  H
                    Query_7712   1    GCAGCTGGTGGAGTCTGGAGCAGCGGTGAGAAGGCCCGGGGAGTCTCTGACGATTTCCTGTCAGGGTTCTGGATACAGAGTTCCCACCCA  90
V  91.0% (263/289)  IGHV5-51*01  6    ..........C............A.....A..A.................A...C......A................CT..A...G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_7712   91   TTGGATCGGGTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGCGACTCTGATACCACATACAGCCC  180
V  91.0% (263/289)  IGHV5-51*01  96   C........C........................................................T.............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  V  N  T  A  Y  L  Q  W  S  S  L  K  A  S  A  P  A
                    Query_7712   181  GTCCTTCCAAGGCCAGGTCACCATCTCTGTCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGCCCCCGC  270
V  91.0% (263/289)  IGHV5-51*01  186  ...........................A.C..........A...G........................C.............A.A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        T  Y  F  C  A  R  T  L  L  P  G  S  P  W  G  P  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7712   271  CACATATTTCTGTGCGAGAACCCTTCTCCCCGGGTCCCCCTGGGGGCCCTTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  91.0% (263/289)  IGHV5-51*01  276  ..TG....A..........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------......--------------------------------------------  22
J  95.5% (42/44)    IGHJ4*02     5    ------------------------------------------------........AC................................  46

                                        
                                        
                    Query_7712   361  AG  362
J  95.5% (42/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_32838

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           385     4e-109
IGHD2-15*01                                                                                           10.3    133   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TCCGACACGAGAAG	GGTGG	CGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCCGACACGAGAAGGGTGGCGGGGCGAACGACTAC	VRHEKGGGANDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	284	1	1	0	0	100
Total	N/A	N/A	284	265	19	0	93.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  T  N  Y
                    Query_7713   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTACCAATTA  90
V  93.3% (265/284)  IGHV5-51*03  6    .............................................................................GC.......GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  P  E  W  M  G  N  I  Y  P  A  V  S  D  T  R  Y  S  L
                    Query_7713   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCCGGAGTGGATGGGGAACATCTATCCTGCTGTCTCTGACACCAGATACAGTCT  180
V  93.3% (265/284)  IGHV5-51*03  96   ......................................T..............T...........G..A......T...........C.C  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  R  Q  W  S  S  L  T  A  S  E  T  A
                    Query_7713   181  GACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCGGCAGTGGAGCAGTCTGACGGCCTCGGAGACCGC  270
V  93.3% (265/284)  IGHV5-51*03  186  .T.....C................................................T............C....A.........C.....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7713   271  CGTGTATTATTGTGTCCGACACGAGAAGGGTGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  351
V  93.3% (265/284)  IGHV5-51*03  276  .A.......C....-------------------------------------------------------------------  289
                                        M  Y  Y  C                                                                     
D  100.0% (5/5)     IGHD2-15*01  14   ----------------------------.....------------------------------------------------  18
J  97.4% (37/38)    IGHJ4*02     9    -------------------------------------------....................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_32839

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           316     2e-88
IGHD3-3*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCCA	GGAGTGG	GCGGACGGACG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCAGGAGTGGGCGGACGGACGCTACTTTGACTAC	ARLQEWADGRYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  E  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_7714   1    ACCCTGTCCCTCACCTGCGAAGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*08  49   ..................ACT...................G........................................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  S  Y  S  G  R  T  D  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_7714   91   TGGCTTGGGTATGTCTCTTATAGTGGGAGAACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCGAAGAAC  180
V  91.4% (223/244)  IGHV4-59*08  139  ...A........A...A...C........C...A..................................A..............C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  Y  L  K  L  S  S  V  I  A  E  D  T  A  L  Y  Y  C  A  R  L  Q  E  W  A  D  G  R  Y 
                    Query_7714   181  CAATTCTACCTGAAACTGAGCTCTGTGATCGCCGAAGACACGGCCCTCTATTATTGTGCGAGACTCCAGGAGTGGGCGGACGGACGCTAC  270
V  91.4% (223/244)  IGHV4-59*08  229  ..G....C......G.............C.....C..........G.G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------------------------------------------------------------....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_7714   271  TTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ4*02     6    .....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_269830

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           347     7e-98
IGHD3-10*01                                                                                           10.3    124  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAAGACCCCGATCAA	TATGG	CACCTCCGAATT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAAGACCCCGATCAATATGGCACCTCCGAATTCTACTTTGACTAC	AKDKDPDQYGTSEFYFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7715   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATACCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-30*18  47   ..........................................G..G.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  S  Y  D  G  S  Q  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7715   91   AATGGGTGGCAGCTATATCATATGATGGAAGTCAGAAGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCG  180
V  94.4% (236/250)  IGHV3-30*18  137  .G..........T...................A.T..A...............................................T...A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      E  N  T  V  D  L  Q  V  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  K  D  P  D  Q  Y  
                    Query_7715   181  AGAACACGGTGGATCTGCAAGTGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAAAGATAAAGACCCCGATCAATATG  270
V  94.4% (236/250)  IGHV3-30*18  227  ........C..T........A................T................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD3-10*01  8    --------------------------------------------------------------------------------------....  11

                                      IMGT--------------------->                                  
                                      G  T  S  E  F  Y  F  D  Y  W  G  Q  G  T  P  V  A  V  S  S  
                    Query_7715   271  GCACCTCCGAATTCTACTTTGACTACTGGGGCCAGGGAACCCCGGTCGCCGTCTCCTCAG  330
D  100.0% (5/5)     IGHD3-10*01  12   .-----------------------------------------------------------  12
J  95.7% (45/47)    IGHJ4*02     2    -------------.............................T....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_306130

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           430     1e-122
IGHD1-26*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCG	AGTGGGAGCTACT	TGGGGCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTAC	ARDLEWELLGAFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	283	8	0	97.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  R  Y
                    Query_7716   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGATA  90
V  97.3% (283/291)  IGHV1-69*06  6    .......................................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  S  F  G  T  A  H  Y  A  Q
                    Query_7716   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTAGCTTTGGAACAGCACACTACGCACA  180
V  97.3% (283/291)  IGHV1-69*06  96   .................................................................T......T......A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  R  S  T  S  T  A  Y  M  E  L  S  S  L  S  S  E  D  T  A
                    Query_7716   181  GAGATTCCAGGGCAGAGTCACGATTACCGCGGACAGATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGCTCTGAGGACACGGC  270
V  97.3% (283/291)  IGHV1-69*06  186  ..AG...............................A.......................................A..............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  D  L  E  W  E  L  L  G  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7716   271  CGTGTATTACTGTGCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  97.3% (283/291)  IGHV1-69*06  276  .....................--------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                       
D  100.0% (13/13)   IGHD1-26*01  6    --------------------------.............--------------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     6    ----------------------------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_306131

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD5-18*01                                                                                           21.8    0.042 
IGHJ3*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACTAGGGCCCGGTCGCGCGC	GTGGATACACCTAT	TATGCTCATT	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACTAGGGCCCGGTCGCGCGCGTGGATACACCTATTATGCTCATTCTTTTGATATC	ARELGPGRARGYTYYAHSFDI	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  D  S  I  S  G  Y  Y  W  N  W  I  R  Q  P  P  E  K  G  L  E 
                    Query_7717   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGACTCCATCAGTGGTTACTACTGGAACTGGATCCGGCAGCCCCCAGAGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ...................C...........G..........A............G....................G.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_7717   91   TGGATTGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ........G...............................................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  L  G  P  G  R  A  R  G 
                    Query_7717   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAACTAGGGCCCGGTCGCGCGCGTGGA  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD5-18*01  1    -------------------------------------------------------------------------------------.....  5

                                      MGT-------------------------->                                  
                                       Y  T  Y  Y  A  H  S  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_7717   271  TACACCTATTATGCTCATTCTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  334
D  92.9% (13/14)    IGHD5-18*01  6    ....G....-------------------------------------------------------  14
J  97.8% (44/45)    IGHJ3*02     6    -------------------..........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_306132

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7718   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ......................................C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_7718   91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P 
                    Query_7718   181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC  270
V  90.6% (221/244)  IGHV4-59*01  229  ...........G...C....C...........T............G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  95.7% (44/46)    IGHJ5*02     6    ------------------------------------------------------------------------------............  17

                                                                        
                                       W  G  Q  G  A  L  V  S  V  S  S  
                    Query_7718   271  TGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  304
J  95.7% (44/46)    IGHJ5*02     18   ............A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_306133

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  V  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7719   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCGTGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-21*01  47   ............................................AG.......A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_7719   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  92.8% (232/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_7719   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  92.8% (232/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7719   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_306134

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  H
                    Query_7720   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATCA  90
V  92.4% (268/290)  IGHV5-51*01  6    ....................C........A.....................G.........A......C.........C.......GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  P
                    Query_7720   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCCC  180
V  92.4% (268/290)  IGHV5-51*01  96   ...................................................G.......A.....G.......G....C.....C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  A
                    Query_7720   181  GTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCGC  270
V  92.4% (268/290)  IGHV5-51*01  186  ...............G........C...................................G.......G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_7720   271  CTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  350
V  92.4% (268/290)  IGHV5-51*01  276  .A.......C.....G....------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    -----------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_306135

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           363     1e-102
IGHD3-10*01                                                                                           10.3    123   
IGHJ2*01                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CG	GGTTC	CATCTGTCCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGACGGGTTCCATCTGTCCCCCTACTGGTACTTCGATCTC	ARDGFHLSPYWYFDL	249	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	256	8	5	3	0	62.5
Total	N/A	N/A	256	244	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7721   1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCACCTTTGGTGATTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  95.3% (244/256)  IGHV3-49*04  47   .........................T..........................T................................G....  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  T  Y  G  G  T  A  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_7721   91   AGTGGGTAGGTTTCATTAGAAGCAAGACTTATGGTGGGACAGCAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  95.3% (244/256)  IGHV3-49*04  137  .........................AG..............A................................................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------------CDR3
                                      D  S  K  S  I  A  F  L  R  M  D  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  D  G  F  H  L  
                    Query_7721   181  ATTCCAAAAGCATCGCCTTTCTGCGAATGGACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTGCCAGGGACGGGTTCCATCTGT  270
V  95.3% (244/256)  IGHV3-49*04  227  ..................A.....A....A......................................A.T..A..--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (5/5)     IGHD3-10*01  11   ------------------------------------------------------------------------------.....-------  15

                                      -IMGT----------------->                                  
                                      S  P  Y  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_7721   271  CCCCCTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCCTCAG  327
J  98.1% (52/53)    IGHJ2*01     1    ----........................................A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_306136

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           428     3e-122
IGHD2-2*02                                                                                            19.9    0.18  
IGHJ5*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAAAGTGGCGGGGA	ACCAGCTGTTATA	AAGAGCGCTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCC	ARGKWRGTSCYKERCWFDP	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	73	1	0	98.6
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	112	2	0	98.2
CDR3-IMGT (germline)	291	295	5	5	0	0	100
Total	N/A	N/A	292	283	9	0	96.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  S  
                    Query_7722   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTAGCA  93
V  96.9% (283/292)  IGHV5-51*03  2    .....................................................................G...........G.....C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  R  Y  
                    Query_7722   94   ACTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATAATCTATCCTGGTGACTCTGAGACCAGATACA  183
V  96.9% (283/292)  IGHV5-51*03  92   G...........G.............................................C....................T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_7722   184  GACCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  96.9% (283/292)  IGHV5-51*03  182  .C........................................................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  M  Y  Y  C  A  R  G  K  W  R  G  T  S  C  Y  K  E  R  C  W  F  D  P  W  G  Q  G  T  
                    Query_7722   274  CCGCCATGTATTATTGTGCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCCTGGGGCCAGGGAACCC  363
V  96.9% (283/292)  IGHV5-51*03  272  .............C........--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  92.3% (12/13)    IGHD2-2*02   17   --------------------------------------........C....---------------------------------------  29
J  100.0% (47/47)   IGHJ5*02     5    -------------------------------------------------------------.............................  33

                                                        
                                      L  V  T  V  S  S  
                    Query_7722   364  TGGTCACCGTCTCCTCAG  381
J  100.0% (47/47)   IGHJ5*02     34   ..................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_306137

Length=317
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           329     3e-92
IGHD3-10*01                                                                                           14.1    7.7  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGA	TTCGGGG	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGATTCGGGGAC	ARRFGD	243	260	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  S  F  S  D  Y  Y  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_7723   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCAGTTTCAGTGACTACTACATGACCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.3% (229/248)  IGHV3-11*06  47   ....................G...............CC...................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  N  R  G  R  N  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7723   91   AGTGGATTTCATATATTAGTAATCGTGGTAGAAACACAAGTTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.3% (229/248)  IGHV3-11*06  137  .....G.......C.......G.A..A....TT......AC.................................................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----CDR3-IMGT--->          
                                      K  K  S  L  F  L  Q  M  N  S  L  R  A  D  D  T  A  I  Y  Y  C  A  R  R  F  G  D  W  G  Q  
                    Query_7723   181  AGAAGTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTATTTACTACTGTGCGAGAAGATTCGGGGACTGGGGCCAGG  270
V  92.3% (229/248)  IGHV3-11*06  227  ....C.......A...........................G.........G.G..T............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-10*01  13   -----------------------------------------------------------------------.......------------  19
J  100.0% (36/36)   IGHJ4*02     13   ------------------------------------------------------------------------------............  24

                                                              
                                      G  T  L  V  T  V  S  S  
                    Query_7723   271  GAACCCTGGTCACCGTCTCCTCAG  294
J  100.0% (36/36)   IGHJ4*02     25   ........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30621390


Query= Query_306138

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           308     4e-86
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ATTTCT	TATGGTTCGGGGAGT	CACGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAATTTCTTATGGTTCGGGGAGTCACGGGTGGTTCGACCCC	ARISYGSGSHGWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	220	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  K  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7724   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAAATACTTCTGGAGTTGGATCCGTCAGCCCCCCGGGAAGGGCCTGGAG  90
V  90.5% (220/243)  IGHV4-59*01  49   ...............................G.........T.GT....A......C........G........A........A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  I  G  T  T  S  Y  N  P  S  L  E  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_7724   91   TGGATTGGTTACATCTATTACATTGGGACCACCAGCTACAACCCCTCCCTCGAGAGTCGCGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  90.5% (220/243)  IGHV4-59*01  139  ........G..T..........G.....G.....A................A.......A.............T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  R  A  M  Y  Y  C  A  R  I  S  Y  G  S  G  S  H  G 
                    Query_7724   181  CAGTTCTCCCTGAAGCTAACGTCTGTGACCGCTGCGGACAGGGCCATGTATTACTGTGCGCGAATTTCTTATGGTTCGGGGAGTCACGGG  270
V  90.5% (220/243)  IGHV4-59*01  229  .................G.GC...................C....G..............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (15/15)   IGHD3-10*01  8    ---------------------------------------------------------------------...............------  22

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7724   271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (46/46)   IGHJ5*02     6    ..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_234836

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           279     3e-77
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	216	28	6	86.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_7725   4    CCCTGAGACTCTCCTGTGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.4% (216/250)  IGHV4-34*01  50   .....TCC...A....C.....C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_7725   94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.4% (216/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_7725   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.4% (216/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_7725   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_234835

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70D*04                                                                                          369     2e-104
IGHJ6*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70D*04	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGAT	N/A	N/A	N/A	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACACGGATGGACGTC	TRMDV	263	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	45	1	0	97.8
CDR1-IMGT	47	76	30	24	6	0	80
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	106	8	0	93
CDR3-IMGT (germline)	263	270	8	7	1	0	87.5
Total	N/A	N/A	270	253	17	0	93.7


Alignments

                                       <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                         L  V  K  P  T  Q  T  L  T  L  T  C  S  F  S  G  F  S  L  S  T  G  G  M  R  V  S  W  I  R
                    Query_7726    1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCTCCTTCTCTGGGTTCTCACTTTCCACTGGGGGTATGCGTGTGAGTTGGATCCG  90
V  93.7% (253/270)  IGHV2-70D*04  30   .....................................A...................CAG....A.T..A...........C........  119
                                         L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  R  V  S  W  I  R

                                       -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                         Q  P  P  G  K  A  L  E  W  L  A  R  I  D  W  D  D  D  K  F  Y  S  T  S  L  K  T  R  L  T
                    Query_7726    91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACGCATTGATTGGGATGATGATAAATTCTACAGTACATCTCTGAAGACCAGACTCAC  180
V  93.7% (253/270)  IGHV2-70D*04  120  ..................................................................C.................G.....  209
                                         Q  P  P  G  K  A  L  E  W  L  A  R  I  D  W  D  D  D  K  F  Y  S  T  S  L  K  T  R  L  T

                                       ---------------------FR3-IMGT----------------------------------------------------><--CDR3-
                                         I  S  K  D  S  S  K  N  Q  V  V  L  R  L  T  N  M  D  P  A  D  T  A  T  Y  Y  C  T  R  M
                    Query_7726    181  CATCTCCAAGGACTCCTCCAAAAACCAGGTGGTCCTTAGATTGACCAACATGGACCCTGCAGACACAGCCACATATTACTGTACACGGAT  270
V  93.7% (253/270)  IGHV2-70D*04  210  .............A........................C.A..................TG...........G.........G.......  299
                                         I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                       IMGT-->                              
                                         D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_7726    271  GGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  307
J  100.0% (37/37)   IGHJ6*02      23   .....................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_234832

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           332     4e-93
IGHD3-22*01                                                                                           21.8    0.043
IGHJ4*01                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCGGAGGTGGGATGACGCGGACTACTCCTC	TGATACTAGTGGTT	TTCGACCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCGGAGGTGGGATGACGCGGACTACTCCTCTGATACTAGTGGTTTTCGACCT	ARGRRWDDADYSSDTSGFRP	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  N  S  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_7727   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCCGGAACAGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  92.7% (230/248)  IGHV4-31*03  49   .......................................A.C.GTG............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  H  S  G  S  A  Y  Y  N  P  S  L  K  S  R  T  S  I  S  V  D  T  S 
                    Query_7727   91   CTGGAATGGATTGGCTACATCTATCACAGTGGGAGCGCCTACTACAACCCGTCCCTCAAGAGTCGAACTTCCATATCAGTAGACACGTCT  180
V  92.7% (230/248)  IGHV4-31*03  139  .....G........G.........T...........A.............................GT.A....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  W  D  D  A 
                    Query_7727   181  AAGAACCAGTTCTCTCTGATTCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGGGGCCGGAGGTGGGATGACGCG  270
V  92.7% (230/248)  IGHV4-31*03  229  ..............C....AG....GC.............................T...........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      DR3-IMGT------------------------>                                  
                                       D  Y  S  S  D  T  S  G  F  R  P  W  G  H  G  T  L  V  T  V  S  S  
                    Query_7727   271  GACTACTCCTCTGATACTAGTGGTTTTCGACCTTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  337
D  92.9% (13/14)    IGHD3-22*01  10   -----------.....G........------------------------------------------  23
J  97.1% (33/34)    IGHJ4*01     15   ---------------------------------........A.........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_234831

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           419     2e-119
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	CCTTGAACATCCA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCTTGAACATCCATGATGCTTTTGATATC	ARALNIHDAFDI	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  T  Y
                    Query_7728   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGTAAGGCTTCTGGAGGCACCTTCAGCACCTA  90
V  96.2% (279/290)  IGHV1-69*06  6    ..................G.........................................C.........................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  L  N  Y  A  Q
                    Query_7728   91   TGCTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATATTTGGTACACTAAACTACGCACA  180
V  96.2% (279/290)  IGHV1-69*06  96   ........G.........................................................C.........GC............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  I  T  I  T  A  D  K  S  T  S  T  A  H  M  E  L  S  S  L  K  S  D  D  T  A
                    Query_7728   181  GAAGTTCCAGGGCAGAATCACGATTACCGCGGACAAATCCACGAGCACAGCCCACATGGAGCTGAGCAGCCTGAAATCTGATGACACGGC  270
V  96.2% (279/290)  IGHV1-69*06  186  ................G...................................T.....................G......G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  R  A  L  N  I  H  D  A  F  D  I  W  G  Q  G  T  M  V  T  L  S  S  
                    Query_7728   271  CGTGTATTACTGTGCGAGAGCCTTGAACATCCATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCCTCTCTTCAG  353
V  96.2% (279/290)  IGHV1-69*06  276  ....................---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
J  98.0% (49/50)    IGHJ3*02     1    ---------------------------------........................................G.........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_234830

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            329     3e-92
IGHD1-26*01                                                                                           14.1    8.5  
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGATA	TTA	GGGAGCT	TG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGGATATTAGGGAGCTTGACTTCTTCTACTACGGTATGGACGTC	AKDIRELDFFYYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	252	10	9	1	0	90
Total	N/A	N/A	252	231	21	0	91.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  T  G  F  N  F  E  D  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7729   1    GGTCCCTGAGACTCTCCTGTGCAGGCACTGGATTCAACTTTGAAGATTATGCCATACACTGGGTCCGGCAAGCTCCCGGGAAGGGCCTGG  90
V  91.7% (231/252)  IGHV3-9*01   47   ........................C.T.........C......T...........G....................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  T  W  N  S  D  N  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7729   91   AGTGGGTCGCAGGTATTACTTGGAACAGTGATAACATCGGTTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  91.7% (231/252)  IGHV3-9*01   137  ........T.........G......T....G..G...A..C................................................A  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      E  N  S  V  Y  L  Q  M  D  S  L  R  P  E  D  T  A  L  Y  F  C  A  K  D  I  R  E  L  D  F  
                    Query_7729   181  AGAACTCCGTCTATCTGCAGATGGACAGTCTGAGACCTGAGGACACGGCCTTGTATTTCTGTGCAAAGGATATTAGGGAGCTTGACTTCT  270
V  91.7% (231/252)  IGHV3-9*01   227  ........C.G........A...A...........G.....................A.........A....------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (7/7)     IGHD1-26*01  9    ---------------------------------------------------------------------------.......--------  15
J  96.4% (54/56)    IGHJ6*02     4    ------------------------------------------------------------------------------------...A..  9

                                      T------------------>                              
                                      F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_7729   271  TCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  320
J  96.4% (54/56)    IGHJ6*02     10   A.................................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_40599

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           430     1e-122
IGHD3-22*01                                                                                           37.2    1e-06 
IGHJ2*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGCCTTGAATTCAAGGT	GTATTACTATGATAGTGATGGTTAT	GAGG	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCGCCTTGAATTCAAGGTGTATTACTATGATAGTGATGGTTATGAGGGGTACTTCGATCTC	ARDRLEFKVYYYDSDGYEGYFDL	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	283	8	0	97.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_7730   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTA  90
V  97.3% (283/291)  IGHV1-46*01  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  R  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  N  P  S  G  G  T  T  S  Y  A  Q
                    Query_7730   91   CTATATGCGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGTAATCAACCCTAGTGGTGGGACCACAAGCTACGCACA  180
V  97.3% (283/291)  IGHV1-46*01  96   ........A...........................................A...................T.G...............  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  T  T  S  T  V  Y  M  D  V  S  S  L  R  S  E  D  T  A
                    Query_7730   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGACCACGAGCACAGTCTACATGGACGTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  97.3% (283/291)  IGHV1-46*01  186  .....................................T......................GC............................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  Y  C  A  R  D  R  L  E  F  K  V  Y  Y  Y  D  S  D  G  Y  E  G  Y  F  D  L  W  G  R
                    Query_7730   271  CGTGTATTACTGTGCGAGAGACCGCCTTGAATTCAAGGTGTATTACTATGATAGTGATGGTTATGAGGGGTACTTCGATCTCTGGGGCCG  360
V  97.3% (283/291)  IGHV1-46*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  92.0% (23/25)    IGHD3-22*01  1    ---------------------------------------................AG.......--------------------------  25
J  100.0% (48/48)   IGHJ2*01     6    --------------------------------------------------------------------......................  27

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_7730   361  TGGCACCCTGGTCACTGTCTCCTCAG  386
J  100.0% (48/48)   IGHJ2*01     28   ..........................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_229892

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           347     7e-98
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGGTCC	ATTACTATGATAGTA	CTTCTTACTACGGGAGTCGGTTCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGGTCCATTACTATGATAGTACTTCTTACTACGGGAGTCGGTTCCACTTTGACTAC	RGWSITMIVLLTTGVGSTLTT	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	107	51	48	2	1	94.1
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	248	237	10	1	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  S  S  Y  Y  W  S  W  V  R  Q  P   Q  G  R  D
                    Query_7731   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTAGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCC-AGGGAAGGGA  89
V  95.6% (237/248)  IGHV4-61*01  49   .........................................C...G....................A............C..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                        W  S  G  L  G  T  S  I  T  E  G  T  P  T  T  T  P  P  S  R  V  E  S  P  C  Q  W  T  R  P
                    Query_7731   90   CTGGAGTGGATTGGGTACATCTATTACAGAGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTGGACACGTCC  179
V  95.6% (237/248)  IGHV4-61*01  139  .................T...........T....G.......................................A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                        R  T  S  S  P  C  S  *  A  L  *  P  L  R  T  R  P  C  I  T  V  R  G  W  S  I  T  M  I  V
                    Query_7731   180  AAGAACCAGTTCTCCCTGCAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGGTGGTCCATTACTATGATAGT  269
V  95.6% (237/248)  IGHV4-61*01  229  ..................A..C..............................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (15/15)   IGHD3-22*01  3    ----------------------------------------------------------------------------..............  16

                                      CDR3-IMGT-------------------------->                                  
                                        L  L  T  T  G  V  G  S  T  L  T  T  G  A  R  D  P  W  S  P  S  P  Q 
                    Query_7731   270  ACTTCTTACTACGGGAGTCGGTTCCACTTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  339
D  100.0% (15/15)   IGHD3-22*01  17   .---------------------------------------------------------------------  17
J  97.8% (44/45)    IGHJ4*02     4    -------------------------.......................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_29474

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  A  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_7732   1    ACCCTGTCCCTCACCTGCACTGCCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   ......................T........G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_7732   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCGGTAGACACGTCCAAGAGC  180
V  92.2% (226/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A..A................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  L  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_7732   181  CAGTTCTCCCTGAAGCTGAGCTCTCTGACCGCTGCGGACGCGGCCGTGTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.2% (226/245)  IGHV4-59*01  229  ........................G..............A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7732   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_40591

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            377     9e-107
IGHD2-21*02                                                                                           14.1    8.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TC	GGTGGTAACT	CCATGAGGTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTCGGTGGTAACTCCATGAGGTATGGTATGGACGTC	ARVGGNSMRYGMDV	252	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	137	27	27	0	0	100
FR3-IMGT	138	251	114	111	3	0	97.4
CDR3-IMGT (germline)	252	258	7	7	0	0	100
Total	N/A	N/A	255	248	7	0	97.3


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R  Q  S  P  S  R  G  
                    Query_7733   4    CCCTGAGACTCTCCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGAGAGGCC  93
V  97.3% (248/255)  IGHV6-1*01   50   ....CTC....A..............................................................................  139
                                         L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R  Q  S  P  S  R  G  

                                      ----------------><--------CDR2-IMGT--------><---------------------------------------------
                                      L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R  I  I  I  N  P  D  
                    Query_7733   94   TTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGAATAATCATCAACCCAGACA  183
V  97.3% (248/255)  IGHV6-1*01   140  ...........................................................................C..............  229
                                      L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R  I  T  I  N  P  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      T  S  K  N  Q  F  S  L  Q  L  K  S  V  T  P  E  D  T  A  V  Y  Y  C  A  R  V  G  G  N  S  
                    Query_7733   184  CATCCAAGAACCAGTTCTCCCTGCAACTGAAGTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCAAGAGTCGGTGGTAACTCCA  273
V  97.3% (248/255)  IGHV6-1*01   230  .........................G.....C...........................................---------------  304
                                      T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A  R                 
D  90.0% (9/10)     IGHD2-21*02  11   -----------------------------------------------------------------------------......G...---  20

                                      IMGT--------------->                                 
                                      M  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7733   274  TGAGGTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (45/45)   IGHJ6*02     18   --------.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_40592

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           343     2e-96
IGHD3-10*01                                                                                           21.8    0.045
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TCAGCCCCGGAGATGGG	ACTCTGGTTCGGGG	CCCCGGAGATGGGACTATGGTTCGAAGAAGGGGCAG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGCCCCGGAGATGGGACTCTGGTTCGGGGCCCCGGAGATGGGACTATGGTTCGAAGAAGGGGCAGCTACGATCTGGACGTC	VSPGDGTLVRGPGDGTMVRRRGSYDLDV	243	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	231	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  C  Y  M  N  W  I  R  Q  A  P  G  K  G  L  
                    Query_7734   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTGCTACATGAACTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.1% (231/243)  IGHV3-11*01  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  G  R  S  G  R  T  I  Y  Y  A  D  S  V  K  G  R  F  T  T  S  R  D  N  A  
                    Query_7734   91   AGTGGATTTCGTACATTGGTCGCAGTGGTAGAACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCACCTCCAGGGACAACGCCA  180
V  95.1% (231/243)  IGHV3-11*01  137  .....G....A......A..A.T........T........................................T.................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  S  P  G  D  G  T  L  V  
                    Query_7734   181  AGAACTCACTTTATCTGCAAATGAACAGCCTGAGAGCCGATGACACGGCCGTCTATTACTGTGTCAGCCCCGGAGATGGGACTCTGGTTC  270
V  95.1% (231/243)  IGHV3-11*01  227  ..........G.............................G...........G..........---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  92.9% (13/14)    IGHD3-10*01  6    --------------------------------------------------------------------------------...A......  15

                                      ----------CDR3-IMGT------------------------------------>                                 
                                      R  G  P  G  D  G  T  M  V  R  R  R  G  S  Y  D  L  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_7734   271  GGGGCCCCGGAGATGGGACTATGGTTCGAAGAAGGGGCAGCTACGATCTGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  359
D  92.9% (13/14)    IGHD3-10*01  16   ....-------------------------------------------------------------------------------------  19
J  93.9% (46/49)    IGHJ6*02     14   ----------------------------------------.....G.A.......................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_40593

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           327     9e-92
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	GGTAAAGACCCCGGAGGGCGCC	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTAAAGACCCCGGAGGGCGCCTACTTCTCCTACTACGGGATGGACGTC	ARVKTPEGAYFSYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	228	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  D  Y  T  L  N  W  V  R  Q  V  P  G  K  G  L  
                    Query_7735   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTCAGTGATTATACTCTGAACTGGGTCCGCCAGGTTCCAGGGAAGGGACTGG  90
V  92.3% (228/247)  IGHV3-21*01  47   ........................C...................AGC....GCA..................C............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  S  S  G  Y  Y  I  Y  Y  A  D  S  V  N  G  R  F  T  I  S  R  D  N  A  
                    Query_7735   91   AGTGGGTCTCATCCGTTAGCAGTAGTGGTTATTACATATACTACGCAGACTCAGTGAACGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.3% (228/247)  IGHV3-21*01  137  ..............A....T......A..AG...........................G...............................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  V  Y  L  Q  M  N  N  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  K  T  P  E  G  A  
                    Query_7735   181  AGAACTCAGTGTATCTGCAAATGAACAACCTGAGAGCCGACGACACGGCTGTTTATTACTGTGCGAGGGTAAAGACCCCGGAGGGCGCCT  270
V  92.3% (228/247)  IGHV3-21*01  227  ........C..................G............G...........G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  91.7% (55/60)    IGHJ6*02     3    -----------------------------------------------------------------------------------------.  3

                                      IMGT--------------------->                                 
                                      Y  F  S  Y  Y  G  M  D  V  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_7735   271  ACTTCTCCTACTACGGGATGGACGTCTGGGGCCAGGGGACCGCGGTCACCGTCTCCTCA  329
J  91.7% (55/60)    IGHJ6*02     4    ...A..A.........T.................A......A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_40594

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           276     3e-76
IGHD3-16*02                                                                                           21.8    0.044
IGHJ3*01                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGCGTTTTCG	CCGCAATCACAATAGCTATA	ATGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGCGTTTTCGCCGCAATCACAATAGCTATAATGTC	ARGLLIEDPNYVWGRFRRNHNSYNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	97	17	0	85.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	210	34	0	86.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  G  L  E 
                    Query_7736   1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  86.1% (210/244)  IGHV4-59*01  49   ..................A....C.......G.......A...G..........AG....A.C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  F  S  T  G  S  T  H  Y  N  P  S  V  K  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_7736   91   TGGCTTGGGTTTTTCTTTTCCACTGGGAGCACCCACTACAACCCCTCCGTCAAGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  86.1% (210/244)  IGHV4-59*01  139  ...A......A.A...A..A..G..........A..............C..........A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  S  D  V  T  A  A  D  T  A  A  Y  F  C  A  R  G  L  L  I  E  D  P  N  Y 
                    Query_7736   181  CAGTTGTCCCTCAACCTGAGCGATGTGACCGCTGCGGACACGGCCGCGTATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCAACTAT  270
V  86.1% (210/244)  IGHV4-59*01  229  .....C.....G..G......TC.......................T.....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  R  F  R  R  N  H  N  S  Y  N  V  G  G  Q  G  T  P  V  T  V  S  S  
                    Query_7736   271  GTTTGGGGGCGTTTTCGCCGCAATCACAATAGCTATAATGTCGGGGGCCAAGGGACCCCGGTCACCGTCTCTTCAG  346
D  88.2% (15/17)    IGHD3-16*02  14   .........A...A...-----------------------------------------------------------  30
J  89.7% (35/39)    IGHJ3*01     12   -------------------------------------.....T.............AAT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_40595

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           367     6e-104
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TAGATCGGCAGTATAACCATGGGAC	TAGTGGTTATTA	TCTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTAGATCGGCAGTATAACCATGGGACTAGTGGTTATTATCTCGACTAC	AKVDRQYNHGTSGYYLDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7737   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-48*03  47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  A  G  S  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7737   91   AGTGGGTTTCATACATTAGTAGTAGTGCTGGTTCCAAATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (242/249)  IGHV3-48*03  137  ...........................G.A..A...T.....................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  V  D  R  Q  Y  N  H  
                    Query_7737   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAAAGTAGATCGGCAGTATAACCATG  270
V  97.2% (242/249)  IGHV3-48*03  227  ............A.....................................................G..---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      IMGT--------------------->                                
                                      G  T  S  G  Y  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7737   271  GGACTAGTGGTTATTATCTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  328
D  100.0% (12/12)   IGHD3-22*01  16   ----............------------------------------------------  27
J  100.0% (38/38)   IGHJ4*02     9    --------------------......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_40596

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         322     2e-90
IGHD2-2*01                                                                                            35.3    4e-06
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGGGGAG	TATTGTAGTAGTACCAACTGC	ATG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGGGGAGTATTGTAGTAGTACCAACTGCATGTACGGTCTGGACGTC	ARGGEYCSSTNCMYGLDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  D  I  Y  S  W  N  W  I  R  Q  P  P  G  M  G 
                    Query_7738     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCTCCAGTGATATTTACTCCTGGAACTGGATCCGGCAGCCACCAGGGATGGGC  90
V  91.5% (227/248)  IGHV4-30-2*01  49   .......................................AG.....G.GG...........G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  V  G  H  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  R  S 
                    Query_7738     91   CTGGAGTGGGTTGGCCACATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCCAGAGTCGAGTCACCATCTCAGTTGACAGGTCC  180
V  91.5% (227/248)  IGHV4-30-2*01  139  .........A....GT..................G......................A................A.....A.........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  K  H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  E  Y  C  S  S 
                    Query_7738     181  AAGAAACACTTCTCGTTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGGGGGGGGGAGTATTGTAGTAGT  270
V  91.5% (227/248)  IGHV4-30-2*01  229  .....C..G.....CC...A.....G...........................G..............----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  95.2% (20/21)    IGHD2-2*01     5    ------------------------------------------------------------------------------............  16

                                        -IMGT--------------------->                                 
                                         T  N  C  M  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7738     271  ACCAACTGCATGTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
D  95.2% (20/21)    IGHD2-2*01     17   ....G....---------------------------------------------------  25
J  97.9% (47/48)    IGHJ6*02       15   ------------......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_40597

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_7739   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_7739   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_7739   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_7739   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_212154

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            330     1e-92
IGHD6-13*01                                                                                           12.2    33   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TT	GCAGCGCCTGGT	TTTGGTTTATTCGAGTTT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTTGCAGCGCCTGGTTTTGGTTTATTCGAGTTTGGTATGGACGTC	ARVAAPGFGLFEFGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  D  Y  A  M  H  W  V  R  Q  A  A  G  R  G  L  
                    Query_7740   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGAGGACTATGCCATGCACTGGGTCCGGCAAGCTGCAGGGAGGGGCCTGG  90
V  92.4% (230/249)  IGHV3-9*01   47   ...........................................T..T...........................C......A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  T  G  I  S  W  D  S  G  K  V  D  Y  A  A  S  V  K  G  R  F  S  I  S  R  D  N  A  
                    Query_7740   91   AGTGGGTCACAGGTATTAGTTGGGATAGCGGTAAAGTAGACTATGCGGCCTCTGTGAAGGGCCGATTCAGCATCTCCAGAGACAACGCCA  180
V  92.4% (230/249)  IGHV3-9*01   137  ........T..............A....T....GCA...G........A....................C....................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  S  S  L  F  L  Q  M  N  S  L  R  G  D  D  T  A  L  Y  Y  C  A  R  V  A  A  P  G  F  G  
                    Query_7740   181  AGAGCTCCCTCTTTCTGCAAATGAACAGTCTGAGAGGTGACGACACGGCCTTGTATTACTGTGCAAGAGTTGCAGCGCCTGGTTTTGGTT  270
V  92.4% (230/249)  IGHV3-9*01   227  ...A......G.A.......................C...G.........................A..---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  83.3% (10/12)    IGHD6-13*01  8    -----------------------------------------------------------------------.....AG.....-------  19

                                      GT-------------------->                                 
                                      L  F  E  F  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7740   271  TATTCGAGTTTGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (45/45)   IGHJ6*02     18   -----------.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_212155

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-9*01                                                                                            14.1    8.3  
IGHJ2*01                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTACGC	TTTTGAC	GGCA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTACGCTTTTGACGGCAACTGGTACTTCGATCTC	AREYAFDGNWYFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7741   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGCCATGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ...............................................T...................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  T  T  G  G  S  T  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_7741   91   AGTGGGTTTCAGCTATTACTACTACTGGTGGTAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  .......C..........G.GG..G.............T................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  M  E  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  Y  A  F  D  G  N  
                    Query_7741   181  AGAACACGTTGTCTATGGAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAGAGAGTACGCTTTTGACGGCAACT  270
V  94.0% (235/250)  IGHV3-23*01  227  ........C...A.C..C......................G.........................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-9*01   12   ----------------------------------------------------------------------------.......-------  18
J  100.0% (51/51)   IGHJ2*01     3    ---------------------------------------------------------------------------------------...  5

                                      ------------->                                  
                                      W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_7741   271  GGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  318
J  100.0% (51/51)   IGHJ2*01     6    ................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_212156

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           336     1e-94
IGHD3-22*01                                                                                           23.8    0.011
IGHJ2*01                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAT	TATTTCCATGATAGTCGTGGT	G	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCATTATTTCCATGATAGTCGTGGTGACTGGTACTTCGATCTC	ARDHYFHDSRGDWYFDL	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  H  D  Y  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_7742   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTCACGACTACATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-53*01  47   ............................................AG.A........A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  H  R  D  G  K  T  D  Y  A  V  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_7742   91   AGTGGGTCTCAGTTATTCATAGGGATGGAAAAACAGACTATGCAGTCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.5% (231/247)  IGHV3-53*01  137  .................T....C.G...T.GC...T....C....A............................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------------CDR3-IMGT-
                                      N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  H  Y  F  H  D  S  R  
                    Query_7742   181  ACACTGTGTATCTTCAAATGAACAGCCTGCGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGACCATTATTTCCATGATAGTCGTG  270
V  93.5% (231/247)  IGHV3-53*01  227  ....GC.......................A.....................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  85.7% (18/21)    IGHD3-22*01  2    -----------------------------------------------------------------------....A.T........A...  20

                                      ------------------->                                  
                                      G  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_7742   271  GTGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  85.7% (18/21)    IGHD3-22*01  21   ..----------------------------------------------------  22
J  100.0% (51/51)   IGHJ2*01     3    ---...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_212157

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           414     5e-118
IGHD4-17*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGGCCC	CTACGGTGACTAC	CCGTCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGCCCCTACGGTGACTACCCGTCATACTACTTTGACTAC	AREGPYGDYPSYYFDY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  A  S  G  G  T  F  N  S  Y
                    Query_7743   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGGCTTCTGGAGGCACCTTCAACAGCTA  90
V  95.5% (278/291)  IGHV1-69*01  6    ..................G...........................................A....................G......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  S  W  M  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  I  T  N  Y  A  Q
                    Query_7743   91   TGTTATCAGTTGGATGCGACAGGCCCCTGGACAAGGGCTCGAGTGGATGGGCGGGATCATCCCTATCTTTGGTATAACAAACTACGCACA  180
V  95.5% (278/291)  IGHV1-69*01  96   ..C......C...G.........................T...........A......................C.G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  A  E  S  T  S  T  A  Y  M  E  L  S  S  L  K  S  E  D  T  A
                    Query_7743   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGCCGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAAATCTGAGGACACGGC  270
V  95.5% (278/291)  IGHV1-69*01  186  ................................A.........................................G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        L  Y  Y  C  A  R  E  G  P  Y  G  D  Y  P  S  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  F  S
                    Query_7743   271  CCTGTATTACTGTGCGAGAGAAGGCCCCTACGGTGACTACCCGTCATACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCTTCTC  360
V  95.5% (278/291)  IGHV1-69*01  276  .G...................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (13/13)   IGHD4-17*01  4    ---------------------------.............--------------------------------------------------  16
J  97.9% (47/48)    IGHJ4*02     1    -----------------------------------------------......................................G....  43

                                           
                                        S  
                    Query_7743   361  CTCAG  365
J  97.9% (47/48)    IGHJ4*02     44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_212151

Length=428
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           311     5e-87
IGHD6-13*01                                                                                           31.5    6e-05
IGHJ6*02                                                                                              79.5    5e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCCCTCCCGAGGAGG	TAGCAGCAGCTGGTAC	CGAAAGGGGC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCCCTCCCGAGGAGGTAGCAGCAGCTGGTACCGAAAGGGGCACTTCTACGCAATGGATGTC	ASPSRGGSSSWYRKGHFYAMDV	305	370	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	115	45	20	4	21	44.4
FR2-IMGT	116	166	51	47	4	0	92.2
CDR2-IMGT	167	190	24	16	8	0	66.7
FR3-IMGT	191	304	114	102	12	0	89.5
CDR3-IMGT (germline)	305	309	5	5	0	0	100
Total	N/A	N/A	309	256	32	21	82.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-----------------CD
                                        Q  L  V  Q  S  G  A  E  V  T  K  P  G  S  S  V  K  I  S  C  K  S  S  G  G  T  F  R  S  S
                    Query_7744   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGACGAAGCCTGGGTCCTCGGTGAAGATCTCCTGCAAGTCTTCTGGAGGCACCTTCAGGTCTTC  90
V  82.8% (256/309)  IGHV1-69*01  6    ..................G..........A......................G...........G...................C-----  90
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S      

                                      R1-IMGT-----------------><--------------------FR2-IMGT---------------------><-------CDR2-I
                                        G  Y  T  F  G  T  Y  A  M  T  W  V  R  Q  A  P  G  Q  G  L  E  W  I  G  G  I  I  A  I  A
                    Query_7744   91   TGGATACACCTTCGGAACTTATGCCATGACCTGGGTGCGACAGGCCCCTGGACAAGGGCTCGAGTGGATAGGAGGGATCATCGCCATCGC  180
V  82.8% (256/309)  IGHV1-69*01  91   ----------------.GC.....T..C.G..............................T........G............C.T...TT  164
                                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F

                                      MGT------><----------------------------------------------------FR3-IMGT-------------------
                                        G  I  I  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  A  S  T  G  Y  L  E  V  S  S
                    Query_7744   181  TGGTATAATCAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCGGCGAGTACTGGCTACTTGGAGGTGAGCAG  270
V  82.8% (256/309)  IGHV1-69*01  165  .....C.GCA..................................................CA....C..A.C....A.....C.......  254
                                        G  T  A  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S

                                      ---------------------------------><----------------------------CDR3-IMGT------------------
                                        L  N  S  E  D  T  A  V  Y  Y  C  A  S  P  S  R  G  G  S  S  S  W  Y  R  K  G  H  F  Y  A
                    Query_7744   271  TCTCAACTCTGAGGACACGGCCGTCTATTACTGTGCGAGCCCCTCCCGAGGAGGTAGCAGCAGCTGGTACCGAAAGGGGCACTTCTACGC  360
V  82.8% (256/309)  IGHV1-69*01  255  C..G.GA.................G..............---------------------------------------------------  293
                                        L  R  S  E  D  T  A  V  Y  Y  C  A                                                      
D  100.0% (16/16)   IGHD6-13*01  6    ------------------------------------------------------................--------------------  21
J  92.5% (49/53)    IGHJ6*02     10   --------------------------------------------------------------------------------...A.....G  19

                                      --------->                                 
                                        M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7744   361  AATGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  403
J  92.5% (49/53)    IGHJ6*02     20   T.....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 42076800


Query= Query_212152

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           338     4e-95
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GTTAGGGGGAG	AGGACCAATGGGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTAGGGGGAGAGGACCAATGGGGGGACTACCTTGACCGC	ARLGGEDQWGDYLDR	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	229	13	0	94.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  E  K  G  L  E 
                    Query_7745   1    ACCCTGTCCCTCACCTGCACTGTGTCTAGTGGCTCCATCAGCAGTTACTACTGGAGTTGGATCCGGCAGTCCCCAGAGAAGGGACTGGAG  90
V  94.6% (229/242)  IGHV4-59*08  49   .......................C...G.............T..............C............C......G.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  E  N 
                    Query_7745   91   TGGATTGGATATATCAACTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCGAGAAC  180
V  94.6% (229/242)  IGHV4-59*08  139  ........G......T.T..................................................................A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  G  G  E  D  Q  W  G  D 
                    Query_7745   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCCTGTATTATTGTGCGAGGTTAGGGGGAGAGGACCAATGGGGGGAC  270
V  94.6% (229/242)  IGHV4-59*08  229  ...................G.........................G.......C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (10/11)    IGHD3-16*01  14   --------------------------------------------------------------...T.......-----------------  24
J  93.8% (45/48)    IGHJ4*02     1    ----------------------------------------------------------------------------------------..  2

                                      ----------->                                  
                                       Y  L  D  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7745   271  TACCTTGACCGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  93.8% (45/48)    IGHJ4*02     3    ...T.....TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_212158

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           338     4e-95
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	107	7	0	93.9
Total	N/A	N/A	242	229	13	0	94.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  G  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7746   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACGTTGAGTGGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.6% (229/242)  IGHV3-33*03  47   .....................................C..C...A.C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_7746   91   AGTGGGTGGCAGTTATATGGTATGATGGAATTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCA  180
V  94.6% (229/242)  IGHV3-33*03  137  ..............................G....................................................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_7746   181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCG  270
V  94.6% (229/242)  IGHV3-33*03  227  .......G....A......A..............................G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  90.9% (10/11)    IGHD6-13*01  7    -------------------------------------------------------------------....G......------------  17
J  100.0% (46/46)   IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7746   271  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (46/46)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_212159

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           327     9e-92
IGHD1-26*01                                                                                           14.1    8.5  
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	TGGGAGC	GCCAACTCTACACGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGGAGCGCCAACTCTACACGGCTACTACTACGGTATGGACGTC	ARVGAPTLHGYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  I  S  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7747   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCATTTCCTATGGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-21*01  47   ....................................C.....G.AG....A.......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  G  S  Y  T  Y  F  A  A  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_7747   91   AGTGGGTCTCGTCCATTAGTAGTAGTGGTTCTTACACATACTTCGCGGCCTCAGTAGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.0% (229/249)  IGHV3-21*01  137  ..........A...............A..AG.....T.....A...A.A......GA.................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  I  L  Q  M  D  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  G  A  P  T  L  H  
                    Query_7747   181  AGAACTCACTGATTCTGCAAATGGACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGTGGGAGCGCCAACTCTACACG  270
V  92.0% (229/249)  IGHV3-21*01  227  ...........TA..........A................G...........G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  8    ---------------------------------------------------------------------.......--------------  14

                                      GT-------------------->                                 
                                      G  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7747   271  GCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (55/55)   IGHJ6*02     8    -.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_78288

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     3e-93
IGHD3-10*01                                                                                           14.1    8.5  
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	N/A	TTCGGGG	CTGCCTCATGAGG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAGATTCGGGGCTGCCTCATGAGGACTTCCAGCAC	AQDSGLPHEDFQH	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  Y  S  M  S  W  V  R  Q  A  P  G  K  R  L  
                    Query_7748   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCTACTATTCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGCGGCTGG  90
V  92.4% (231/250)  IGHV3-23*01  47   ............................................AG....G................................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  M  S  G  T  G  G  N  T  Y  Y  A  D  S  V  K  D  R  F  T  I  Y  R  D  N  S  
                    Query_7748   91   AGTGGGTCTCAGGTATGAGTGGTACTGGTGGTAACACATACTACGCAGACTCCGTGAAGGACCGGTTCACCATCTACAGAGACAACTCCA  180
V  92.4% (231/250)  IGHV3-23*01  137  ............C...T.......G........G..........................G..............C.........T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  S  T  V  Y  L  Q  M  N  S  L  R  V  D  D  T  A  I  Y  Y  C  A  Q  D  S  G  L  P  H  E  
                    Query_7748   181  AGAGCACAGTATATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCCATATATTACTGTGCGCAAGATTCGGGGCTGCCTCATGAGG  270
V  92.4% (231/250)  IGHV3-23*01  227  ...A...GC.G.........................C...G.........G..............A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-10*01  13   ----------------------------------------------------------------------.......-------------  19

                                      ---------->                                
                                      D  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7748   271  ACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTC  313
J  100.0% (43/43)   IGHJ1*01     8    ...........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_157995

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           313     1e-87
IGHD6-25*01                                                                                           12.2    31   
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-25*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGGG	GCATCGGCT	GAGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGGGCATCGGCTGAGGGGTGGTTCGACCCC	AGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  L  S  D  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7749   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGGTTCATGTTGAGTGATTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.0% (222/244)  IGHV3-33*03  47   ...............................A....CC..C...AGC.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  K  K  Y  Y  V  D  S  V  K  D  R  F  T  I  S  R  D  D  S  
                    Query_7749   91   AGTGGGTGGCAGTTATATGGTATGACGGAATTAAAAAATACTATGTAGACTCCGTGAAGGACCGATTCACCATCTCCAGAGACGACTCCA  180
V  91.0% (222/244)  IGHV3-33*03  137  .........................T....G...T..........C..............G......................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  V  D  D  T  A  L  Y  Y  C  A  G  A  S  A  E  G  W  F  
                    Query_7749   181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGTCGACGACACGGCTCTTTATTATTGTGCAGGGGCATCGGCTGAGGGGTGGTTCG  270
V  91.0% (222/244)  IGHV3-33*03  227  .......G....A......A................C...G.........G.G.....C.....--------------------------  290
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  88.9% (8/9)      IGHD6-25*01  8    --------------------------------------------------------------------...G.....-------------  16
J  97.8% (45/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_7749   271  ACCCCTGGGGCCAGGGAACCGTGGTCACCGTCTCCTCAG  309
J  97.8% (45/46)    IGHJ5*02     13   ....................C..................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_27948

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           400     9e-114
IGHD2-2*01                                                                                            10.3    135   
IGHJ3*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCCTGAAGTCTTT	TACCA	CCGAG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATATC	AGLKSFTTEDAFDI	285	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	71	66	66	0	0	100
CDR1-IMGT	72	95	24	18	6	0	75
FR2-IMGT	96	146	51	49	2	0	96.1
CDR2-IMGT	147	170	24	23	1	0	95.8
FR3-IMGT	171	284	114	110	4	0	96.5
CDR3-IMGT (germline)	285	287	3	3	0	0	100
Total	N/A	N/A	282	269	13	0	95.4


Alignments

                                      <----------------------------FR1-IMGT----------------------------><-------CDR1-IMGT------>
                                       L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  T  S  W 
                    Query_7750   6    CTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATTCGACTTTACCACCTCTTGG  95
V  95.4% (269/282)  IGHV5-51*01  10   ......................................................................A.AG........G..AC...  99
                                       L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W 

                                      <--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------------
                                       I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  D  D  S  D  T  R  Y  S  P  S 
                    Query_7750   96   ATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAATGGATGGGGGTCATCTATCCTGATGACTCTGATACCAGATACAGCCCGTCC  185
V  95.4% (269/282)  IGHV5-51*01  100  ......................................G.........A............G............................  189
                                       I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S 

                                      --------------------------------------FR3-IMGT--------------------------------------------
                                       F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  S  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A  M 
                    Query_7750   186  TTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACAGTGCCTACCTGCAGTGGGGCAGCCTGAAGGCCTCGGACACCGCCATG  275
V  95.4% (269/282)  IGHV5-51*01  190  ........................................G..CC...............A.............................  279
                                       F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M 

                                      --------><----------------CDR3-IMGT--------------->                                  
                                       Y  Y  C  A  G  L  K  S  F  T  T  E  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7750   276  TATTACTGTGCGGGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  360
V  95.4% (269/282)  IGHV5-51*01  280  ............-------------------------------------------------------------------------  291
                                       Y  Y  C  A                                                                          
D  100.0% (5/5)     IGHD2-2*01   16   --------------------------.....------------------------------------------------------  20
J  100.0% (49/49)   IGHJ3*02     2    ------------------------------------.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_27947

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           310     1e-86
IGHD3-22*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	ACAAGACTCC	GGTTATTAC	AGAACGAGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGAACAAGACTCCGGTTATTACAGAACGAGCGACTAT	VKEQDSGYYRTSDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  C  G  M  H  W  V  R  Q  T  P  G  K  G  L  
                    Query_7751   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTCAGTAGTTGTGGCATGCACTGGGTCCGCCAAACTCCAGGGAAAGGCCTGG  90
V  89.6% (224/250)  IGHV3-30*18  47   ......................................T.......C.A.....................GG.......C..G..G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  T  Y  D  G  S  E  I  H  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  T  S  
                    Query_7751   91   AGTGGGTGGCAGTAATAACATATGATGGAAGTGAGATACATTATGCAGACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACACTTCCA  180
V  89.6% (224/250)  IGHV3-30*18  137  .............T...T..............A.T.A.T.C...............A...........................A.....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      S  N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  E  Q  D  S  G  Y  Y  
                    Query_7751   181  GCAACACCGTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTCTCTACTACTGCGTGAAAGAACAAGACTCCGGTTATTACA  270
V  89.6% (224/250)  IGHV3-30*18  227  AG.....GC.........................................G.G..T.....T.C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD3-22*01  20   --------------------------------------------------------------------------------.........-  28

                                      ------------->                                  
                                      R  T  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7751   271  GAACGAGCGACTATTGGGGCCAGGGAACACTGGTCACCGTCTCGTCAG  318
J  92.5% (37/40)    IGHJ4*02     9    --------.....C..............C..............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_27940

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           297     7e-83
IGHD5-18*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	CTTAC	GTGGATTCGCCTATGGTT	CAC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGGACTTACGTGGATTCGCCTATGGTTCACTTGAGTTC	AKDLRGFAYGSLEF	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	23	1	0	95.8
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	125	24	18	6	0	75
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	232	211	21	0	90.9


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  V  E  W  V  S  L  L  
                    Query_7752   16   GTGCAGCCTCTGGATTCACCTTTGATGATTACACCATGCACTGGGTCCGTCAAGCTCCGGGCAAGGGTGTGGAATGGGTCTCTCTTCTTA  105
V  90.9% (211/232)  IGHV3-43*01  65   ...............................T.............................G......C....G............A...  154
                                         A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  L  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      T  W  D  G  T  R  T  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  K  K  S  L  F  L  
                    Query_7752   106  CTTGGGATGGGACTAGAACATACTATGCGGACTCTGTGAAGGGCCGATTCATCATCTCCAGAGACAAGAGCAAAAAATCACTGTTTCTGC  195
V  90.9% (211/232)  IGHV3-43*01  155  G.........TGG...C...........A......................C...............C........C..C....A.....  244
                                      S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      Q  M  N  S  L  R  P  E  D  S  G  L  Y  Y  C  A  K  D  L  R  G  F  A  Y  G  S  L  E  F  W  
                    Query_7752   196  AAATGAACAGTCTGAGACCTGAGGACAGCGGCTTATATTACTGTGCAAAGGACTTACGTGGATTCGCCTATGGTTCACTTGAGTTCTGGG  285
V  90.9% (211/232)  IGHV3-43*01  245  .................A.........C..C...G..............A..--------------------------------------  296
                                      Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A  K                                         
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------......A.AG........---------------  18
J  92.9% (39/42)    IGHJ4*02     7    ------------------------------------------------------------------------------....C.A.....  18

                                                                    
                                      G  Q  G  T  L  V  A  V  S  S  
                    Query_7752   286  GCCAGGGAACCCTGGTCGCCGTCTCCTCAG  315
J  92.9% (39/42)    IGHJ4*02     19   .................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_24411

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           318     6e-89
IGHD2-21*02                                                                                           18.0    0.58 
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAGTCTGGGCCA	GGTGGTGAC	A	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGAGTCTGGGCCAGGTGGTGACATCGACGTC	ARHESGPGGDIDV	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	227	24	0	90.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  I  V  S  G  G  S  I  S  S  S  S  H  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_7753   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGTTCCATCAGCAGTAGTTCTCACTACTGGGGCTGGATCCGCCAGCCCCCCGGGAAGGGG  90
V  90.4% (227/251)  IGHV4-39*01  49   ...................C............C...............AG.T............................A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  I  T  Y  H  N  T  S  L  K  S  R  V  A  M  S  V  D  T  S 
                    Query_7753   91   CTGGAGTGGATTGGCAGTATATATTATAGTGGGATCACCTACCACAACACGTCCCTCAAGAGTCGAGTCGCCATGTCTGTTGACACGTCC  180
V  90.4% (227/251)  IGHV4-39*01  139  ..............G.....C.............G.......T.....C....................A....A..C..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  L  L  S  L  N  L  D  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  H  E  S  G  P  G  G 
                    Query_7753   181  AAGAACTTGCTCTCCCTGAACCTGGACTCTGCGACCGCCGCAGACACGGCTGTATATTATTGTGCGAGACATGAGTCTGGGCCAGGTGGT  270
V  90.4% (227/251)  IGHV4-39*01  229  ......CA.T..........G...AG.....T.....................G.....C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD2-21*02  11   ------------------------------------------------------------------------------------......  16

                                      ----------->                                  
                                       D  I  D  V  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7753   271  GACATCGACGTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (9/9)     IGHD2-21*02  17   ...-------------------------------------------  19
J  95.2% (40/42)    IGHJ5*02     10   ----.....CC...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_269835

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           262     4e-72
IGHD2-15*01                                                                                           10.3    120  
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	ACATAATCCT	GCTGC	CAGAGGGAC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGACATAATCCTGCTGCCAGAGGGACCAACTGGTTCGACCTC	ARGHNPAARGTNWFDL	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	48	24	19	2	3	79.2
FR2-IMGT	49	99	51	45	6	0	88.2
CDR2-IMGT	100	120	21	18	3	0	85.7
FR3-IMGT	121	234	114	95	19	0	83.3
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	245	208	34	3	84.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  D  F  Y  G  G  S  F     D  S  Y  W  N  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_7754   1    ACCCTGTCCCTCACCTGCGATTTTTATGGTGGGTCCTT---TGATTCCTACTGGAATTGGATCCGCCAGACTCCAGGGAAGGGGCTGGAG  87
V  84.9% (208/245)  IGHV4-34*01  49   ...................C.G.C..............CAG..G..A........GC............C.C..................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  N  R  A  G  S  T  N  F  N  P  S  L  E  S  R  L  T  I  S  V  D  T  S  T  K 
                    Query_7754   88   TGGATTGCAGAAATCAATCGTGCTGGAAGCACCAACTTCAATCCGTCCCTCGAGAGTCGACTCACCATTTCAGTGGACACGTCCACGAAG  177
V  84.9% (208/245)  IGHV4-34*01  139  .......GG..........A.AG..............A...C.........A........G.......A.....A..........A...C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       R  F  S  L  R  L  N  S  L  N  A  A  D  T  G  V  Y  Y  C  A  R  G  H  N  P  A  A  R  G  T 
                    Query_7754   178  CGATTCTCCCTGAGGCTAAATTCTCTTAACGCCGCAGACACGGGTGTGTATTACTGTGCGCGAGGACATAATCCTGCTGCCAGAGGGACC  267
V  84.9% (208/245)  IGHV4-34*01  229  .AG..........A...G.GC...G.G.C......G.......C................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (5/5)     IGHD2-15*01  21   ---------------------------------------------------------------------------.....----------  25
J  96.0% (48/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  D  L  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_7754   268  AACTGGTTCGACCTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  316
J  96.0% (48/50)    IGHJ5*02     3    .............C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_24417

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            299     2e-83
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCTCTCCTAGAAGTGACTGGGCGAGGG	GGGGGAGT	N/A	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCTCTCCTAGAAGTGACTGGGCGAGGGGGGGGAGTTGGTTCGACCCC	AASPRSDWARGGSWFDP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	51	0	0	100
CDR2-IMGT	108	128	21	17	4	0	81
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	218	27	0	89


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  G  S  I  G  I  T  Y  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_7755   1    GGTCCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATCGGCATTACTTACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  89.0% (218/245)  IGHV4-4*02   47   ..A.....TCC...A....C.....................A...G..G.A.......................................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  A  Y  Y  S  G  S  N  N  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  K  S  
                    Query_7755   91   TGGAGTGGATTGGGGAAGCCTATTATAGTGGGAGCAACAACTACAACCCGTCCCTCAAAAGTCGAGTCGCCATATCAGTGGACAAGTCCA  180
V  89.0% (218/245)  IGHV4-4*02   137  .................AT....C............C.....................G.........A..........A..........  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  E  F  S  L  R  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  A  S  P  R  S  D  W  A  
                    Query_7755   181  AGAACGAGTTTTCCCTGAGGTTAACGTCTATGACCGCCGCGGACACGGCCGTATATTATTGTGCGGCCTCTCCTAGAAGTGACTGGGCGA  270
V  89.0% (218/245)  IGHV4-4*02   227  .....C....C.......A.C.G.GC...G......................G.....C......-------------------------  291
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          

                                      GT-------------------->                                  
                                      R  G  G  S  W  F  D  P  W  G  Q  G  I  L  V  I  V  S  S  
                    Query_7755   271  GGGGGGGGAGTTGGTTCGACCCCTGGGGCCAGGGAATCCTGGTCATCGTCTCCTCAG  327
D  100.0% (8/8)     IGHD3-16*01  18   ---........----------------------------------------------  25
J  95.7% (44/46)    IGHJ5*02     6    -----------.........................C........C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_24416

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           438     5e-125
IGHD3-22*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              108     9e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGCCGT	TGGTTAT	AATTCCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTC	ASAVGYNSDYYYGMDV	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	24	0	0	100
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	111	3	0	97.4
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	292	286	6	0	97.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_7756   2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCAGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  91
V  97.9% (286/292)  IGHV5-51*01  2    ....G.....G.............................C.................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_7756   92   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  181
V  97.9% (286/292)  IGHV5-51*01  92   ..........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  P  S  F  Q  G  Q  V  P  I  S  A  D  K  A  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_7756   182  GACCGTCCTTCCAAGGCCAGGTCCCCATCTCAGCCGACAAGGCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  97.9% (286/292)  IGHV5-51*01  182  .C.....................A.................T................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      T  A  M  Y  Y  C  A  S  A  V  G  Y  N  S  D  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  
                    Query_7756   272  CCGCCATGTATTACTGTGCGAGCGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCG  361
V  97.9% (286/292)  IGHV5-51*01  272  ......................--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD3-22*01  19   ----------------------------.......-------------------------------------------------------  25
J  100.0% (56/56)   IGHJ6*02     7    ------------------------------------------................................................  54

                                              
                                      V  S  S 
                    Query_7756   362  TCTCCTCA  369
J  100.0% (56/56)   IGHJ6*02     55   ........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_24415

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD3-16*02                                                                                           12.2    32   
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGT	TCGTTA	CCCAATCTTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTTCGTTACCCAATCTTGGCTACTACTACGGTATGGACGTC	ARDRSLPNLGYYYGMDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  M  G  L  E 
                    Query_7757   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGATGGGGCTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ...............................G.........T...........................C.........A...A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  Y  S  G  T  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_7757   91   TGGATTGGGCATATCTATTACAGTGGGACCACCAGTTACAATCCTTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAT  180
V  93.1% (228/245)  IGHV4-59*01  139  .........T..................G.....AC.....C..C...........................G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  S  L  P  N  L  G  Y 
                    Query_7757   181  CAGTTCTCCCTGAAGCTGAATTCCGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATCGTTCGTTACCCAATCTTGGCTAC  270
V  93.1% (228/245)  IGHV4-59*01  229  ...................GC..T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*02  28   ---------------------------------------------------------------------......---------------  33
J  96.4% (53/55)    IGHJ6*02     8    --------------------------------------------------------------------------------------....  11

                                      ----------------->                                 
                                       Y  Y  G  M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_7757   271  TACTACGGTATGGACGTCTGGGGCCAAGGGGCCACCGTCACCGTCTCCTCA  321
J  96.4% (53/55)    IGHJ6*02     12   ..............................A....G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_24414

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           388     5e-110
IGHD6-19*01                                                                                           16.1    2.6   
IGHJ5*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAGACGGGGTGTGTCT	GTGGCTGG	CTCGCCGGGT	AACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAGACGGGGTGTGTCTGTGGCTGGCTCGCCGGGTAACTCGTTCGACCCC	ARDRRGVSVAGSPGNSFDP	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_7758   2    CAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGTTAC  91
V  92.8% (269/290)  IGHV1-18*04  7    ...................C.............................A....................................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  A  T  N  Y  A  Q 
                    Query_7758   92   GGTATCAACTGGGTGCGCCAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCCCTTATAATGGTGCCACAAACTATGCACAG  181
V  92.8% (269/290)  IGHV1-18*04  97   .......G.........A.................G........................G....C......AA................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  F  Q  D  R  A  T  M  T  T  D  T  S  T  N  S  A  S  M  D  L  R  S  L  T  S  D  D  T  A 
                    Query_7758   182  AACTTCCAGGACAGAGCCACCATGACCACAGACACATCCACCAACTCAGCCTCCATGGACCTGAGGAGCCTGACATCTGACGACACGGCC  271
V  92.8% (269/290)  IGHV1-18*04  187  ..GC......G.....T........................G.G.A......A......G.............G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  A  R  D  R  R  G  V  S  V  A  G  S  P  G  N  S  F  D  P  W  G  Q  G  T  L  V 
                    Query_7758   272  GTCTATTACTGTGCGAGAGACAGACGGGGTGTGTCTGTGGCTGGCTCGCCGGGTAACTCGTTCGACCCCTGGGGCCAGGGAACCCTGGTC  361
V  92.8% (269/290)  IGHV1-18*04  277  ..G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (8/8)     IGHD6-19*01  11   ------------------------------------........----------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------------------------------------------------------....G...............................  38

                                                   
                                       T  V  S  S  
                    Query_7758   362  ACCGTCTCCTCAG  374
J  98.0% (48/49)    IGHJ5*02     39   .............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_24419

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           297     7e-83
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GATAG	N/A	N/A	GTGCGGGATGGCAACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGATAGGTGCGGGATGGCAACCTGACTAC	VIGAGWQPDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	5	2	0	71.4
Total	N/A	N/A	244	217	27	0	88.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  S  G  Y  Y  L  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7759   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTGAGTGGTTATTATTTGAACTGGATCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  88.9% (217/244)  IGHV4-59*01  49   ....................................A.C...A....C..C.G..G.........G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  L  I  S  Y  T  G  S  T  N  Y  N  P  S  L  Q  S  R  V  I  I  S  V  D  T  S  K  N 
                    Query_7759   91   TGGCTTGGTTTAATCTCTTACACCGGGAGTACCAACTACAACCCCTCCCTCCAGAGTCGAGTCATCATATCGGTAGACACGTCCAAGAAC  180
V  88.9% (217/244)  IGHV4-59*01  139  ...A....G.AT....A.....GT.....C.....................A............C......A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  V  I  G  A  G  W  Q  P  D  Y  W 
                    Query_7759   181  CAGTTCTCCCTGAGGTTGAGCTCTGTGACCGCTGCGGACACGGCCCTATATTATTGTGTGATAGGTGCGGGATGGCAACCTGACTACTGG  270
V  88.9% (217/244)  IGHV4-59*01  229  .............A.C.............................G.G.....C....C..G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  95.1% (39/41)    IGHJ4*02     8    --------------------------------------------------------------------------------..........  17

                                                                     
                                       G  P  G  T  L  V  T  V  S  S  
                    Query_7759   271  GGCCCGGGAACGCTGGTCACCGTCTCCTCAG  301
J  95.1% (39/41)    IGHJ4*02     18   ....A......C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_24418

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD3-10*01                                                                                           25.7    0.003
IGHJ5*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GCCTTCGGG	ACTATGTTTCGGGGAATTA	CT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGCCTTCGGGACTATGTTTCGGGGAATTACTACAACTGGTTCGATCCC	ARGLRDYVSGNYYNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_7760   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.0% (222/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_7760   91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.0% (222/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  L  R  D  Y  V  S  G  N 
                    Query_7760   181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCCAGAGGCCTTCGGGACTATGTTTCGGGGAAT  270
V  91.0% (222/244)  IGHV4-59*01  229  ...T...............G................................A......G....--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  89.5% (17/19)    IGHD3-10*01  6    -------------------------------------------------------------------------......G........G.  22

                                      -------------------->                                  
                                       Y  Y  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7760   271  TACTACAACTGGTTCGATCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  89.5% (17/19)    IGHD3-10*01  23   ..-----------------------------------------------------  24
J  98.0% (50/51)    IGHJ5*02     1    ----.............C.....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_217650

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           325     3e-91
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	TCTACAGTGCGGGGCGC	TGGCTGGT	GGCCGGTTGGGTACAT	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7761   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTACCTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGG  90
V  91.9% (228/248)  IGHV3-33*01  47   .............................................G..A....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  H  I  Y  Y  D  G  T  N  K  Y  Y  A  D  S  M  K  G  R  F  T  I  S  G  D  N  S  
                    Query_7761   91   AGTGGGTGGCACATATTTACTATGATGGAACTAATAAGTATTATGCAGACTCCATGAAGGGCCGATTCACCATCTCCGGAGACAATTCCA  180
V  91.9% (228/248)  IGHV3-33*01  137  ...........GT...A.GG..........G......A..C............G.......................A............  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT---------------------------------------------------->                            
                                      R  D  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  M  Y  Y  C  V  R  S  T  V  R  G  A  G  
                    Query_7761   181  GGGATACCCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTATGTATTACTGTGTGAGATCTACAGTGCGGGGCGCTGGCT  270
V  91.9% (228/248)  IGHV3-33*01  227  A.A.C..G............................C.............G............C....----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  12   -------------------------------------------------------------------------------------.....  16

                                                                                    
                                      W  W  P  V  G  Y  M  G  Q  G  T  L  V  T  V  S
                    Query_7761   271  GGTGGCCGGTTGGGTACATGGGCCAGGGAACCCTGGTCACCGTCTC  316
D  100.0% (8/8)     IGHD6-19*01  17   ...-------------------------------------------  19
J  100.0% (27/27)   IGHJ4*02     17   -------------------...........................  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_217651

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            353     9e-100
IGHD2-2*01                                                                                            12.2    32    
IGHJ6*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGAAATGGAG	GCTATG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGAAATGGAGGCTATGACTACTTCTACTACGGCATGGCCGTC	ARRNGGYDYFYYGMAV	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	236	10	0	95.9


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  M  R  N  S  N  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_7762  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATGAGGAATAGTAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.9% (236/246)  IGHV4-4*02  49   ......................................C..C.G..............G...............................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  G  T  I  S  L  D  K  S  K 
                    Query_7762  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGGCACCATATCCCTAGACAAGTCTAAG  180
V  95.9% (236/246)  IGHV4-4*02  139  ................................................................T.........AG..........C...  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                      N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  N  G  G  Y  D  Y  F 
                    Query_7762  181  AACCAGTTCTCCCTGAAACTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAAGAAATGGAGGCTATGACTACTTC  270
V  95.9% (236/246)  IGHV4-4*02  229  .................G.....C..........................................------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-2*01  24   ----------------------------------------------------------------------------......--------  29
J  91.5% (54/59)    IGHJ6*02    4    ----------------------------------------------------------------------------------......A.  11

                                     ----------------->                                 
                                      Y  Y  G  M  A  V  W  G  R  G  T  T  V  P  V  S  S 
                    Query_7762  271  TACTACGGCATGGCCGTCTGGGGCCGAGGGACCACGGTCCCCGTCTCCTCA  321
J  91.5% (54/59)    IGHJ6*02    12   ........T....A...........A.............A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_6179

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHD3-10*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTATCGA	TTCGGGGAGTT	CCCCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTATCGATTCGGGGAGTTCCCCTCTTGACTAC	ARDLIDSGSSPLDY	236	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	20	22	3	3	0	0	100
CDR1-IMGT	23	46	24	24	0	0	100
FR2-IMGT	47	97	51	50	1	0	98
CDR2-IMGT	98	121	24	20	4	0	83.3
FR3-IMGT	122	235	114	112	2	0	98.2
CDR3-IMGT (germline)	236	243	8	8	0	0	100
Total	N/A	N/A	224	217	7	0	96.9


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  S  Y  S  T  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  T 
                    Query_7763   20   TCTGGATTCACCTTCAGTAGCTATAGCACGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTACC  109
V  96.9% (217/224)  IGHV3-21*01  73   ............................T...........................................................GT  162
                                       S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       S  S  Y  I  Y  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 
                    Query_7763   110  AGTAGCTACATTTACTACGCAGACTCAGTGACGGGCCGCTTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAAC  199
V  96.9% (217/224)  IGHV3-21*01  163  .....T.....A...................A......A...................................................  252
                                       S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><----------------CDR3-IMGT--------------->            
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  I  D  S  G  S  S  P  L  D  Y  W  G  Q  G 
                    Query_7763   200  AGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCTTATCGATTCGGGGAGTTCCCCTCTTGACTACTGGGGCCAGGGA  289
V  96.9% (217/224)  IGHV3-21*01  253  ............................................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  100.0% (11/11)   IGHD3-10*01  13   -----------------------------------------------------...........--------------------------  23
J  100.0% (42/42)   IGHJ4*02     7    ----------------------------------------------------------------------....................  26

                                                            
                                       T  L  V  T  V  S  S  
                    Query_7763   290  ACCCTGGTCACCGTCTCCTCAG  311
J  100.0% (42/42)   IGHJ4*02     27   ......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_6178

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           371     7e-105
IGHD2-2*01                                                                                            10.3    127   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGGA	N/A	CCAGC	GCTGGCGACAATC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGACCAGCGCTGGCGACAATCACTACTTTGACTCC	ARTSAGDNHYFDS	263	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	29	1	0	96.7
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	148	21	17	4	0	81
FR3-IMGT	149	262	114	104	10	0	91.2
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	269	253	16	0	94.1


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  T  T  S  G  M  C  V  T  W  I  R
                    Query_7764   1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCACCACTAGTGGAATGTGTGTGACCTGGATCCG  90
V  94.1% (253/269)  IGHV2-70*01  30   ...........................................................G....................G.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  T  W  D  D  E  R  T  Y  N  T  S  L  Q  T  R  L  T
                    Query_7764   91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACTCATTACTTGGGATGATGAGAGAACGTACAACACATCTCTGCAGACCAGGCTCAC  180
V  94.1% (253/269)  IGHV2-70*01  120  ........................................GA............T.A.TAC....G..........A.............  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        V  S  K  D  S  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  T
                    Query_7764   181  CGTCTCTAAGGACAGCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACCTACTACTGTGCACGGAC  270
V  94.1% (253/269)  IGHV2-70*01  210  .A....C.......C.........................................................G..T.............-  298
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   
D  100.0% (5/5)     IGHD2-2*01   18   -----------------------------------------------------------------------------------------.  18

                                      -------CDR3-IMGT-------------->                                  
                                        S  A  G  D  N  H  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7764   271  CAGCGCTGGCGACAATCACTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  335
D  100.0% (5/5)     IGHD2-2*01   19   ....-------------------------------------------------------------  22
J  97.9% (47/48)    IGHJ4*02     1    -----------------............A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_217654

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           400     9e-114
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAAACAGCCCTTC	TAGTAG	N/A	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAAACAGCCCTTCTAGTAGTGCTTTTGATATC	ARGNSPSSSAFDI	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_7765   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTTAGTAGTTA  90
V  94.1% (273/290)  IGHV1-69*06  6    ..................G..............................................................C..C..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  K  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  D  T  S  T  Y  A  Q
                    Query_7765   91   TGGTATCAGCTGGGTGCGAAAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGATACATCAACCTATGCACA  180
V  94.1% (273/290)  IGHV1-69*06  96   ..C................C...................................................G....G...A...C.....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  Y  Q  G  R  V  T  I  T  A  D  K  T  T  A  T  T  Y  M  E  L  S  S  L  R  S  D  G  T  A
                    Query_7765   181  GAAGTACCAGGGCAGAGTCACGATTACCGCGGACAAAACCACGGCCACAACCTACATGGAGCTGAGCAGCCTGAGATCTGACGGCACGGC  270
V  94.1% (273/290)  IGHV1-69*06  186  .....T...............................T.....AG....G...............................G.A......  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  G  N  S  P  S  S  S  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7765   271  CGTGTATTACTGTGCGAGAGGAAACAGCCCTTCTAGTAGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  356
V  94.1% (273/290)  IGHV1-69*06  276  ....................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD2-2*01   10   ---------------------------------......-----------------------------------------------  15
J  100.0% (47/47)   IGHJ3*02     4    ---------------------------------------...............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_217655

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           311     4e-87
IGHD3-3*01                                                                                            25.7    0.003
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGCTGGGGAAGGG	ACGATTTTTCGAGTGG	GCTGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGCTGGGGAAGGGACGATTTTTCGAGTGGGCTGAGGTTCGGCCCC	ARGRWGRDDFSSGLRFGP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	224	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  G  G  S  G  I  S  F  T  T  Y  E  M  N  W  V  R  Q  A  A  G  K  G  L  
                    Query_7766   1    GGTCCCTGAGACTCTCCTGTGGAGGGTCTGGAATCAGTTTCACCACTTATGAAATGAATTGGGTCCGCCAGGCTGCAGGGAAGGGGCTGG  90
V  90.0% (224/249)  IGHV3-48*03  47   .....................C..CC......T...CC....GT.G............C...............C...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  T  R  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  D  A  
                    Query_7766   91   AGTGGGTTTCATATATTAGCAGTAGTGGCAGTACCAGATACTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACGACGCCA  180
V  90.0% (224/249)  IGHV3-48*03  137  .............C.....T........T.......T....................A.........................A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  A  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  F  C  A  R  G  R  W  G  R  D  D  
                    Query_7766   181  AGGCTTCAGTTTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTCTTTATTTCTGTGCGAGAGGCCGCTGGGGAAGGGACGATT  270
V  90.0% (224/249)  IGHV3-48*03  227  ..AAC...C.G.................C.....................G......A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.8% (15/16)    IGHD3-3*01   6    ------------------------------------------------------------------------------------......  11

                                      IMGT--------------------->                                  
                                      F  S  S  G  L  R  F  G  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7766   271  TTTCGAGTGGGCTGAGGTTCGGCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  93.8% (15/16)    IGHD3-3*01   12   ...G......--------------------------------------------------  21
J  97.8% (44/45)    IGHJ5*02     7    ---------------......A......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_217657

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     9e-93
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	N/A	TCGACCCTGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCGACCCTGCTTGACAAA	ASTLLDK	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  P  
                    Query_7767   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGCACCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  93.1% (228/245)  IGHV3-23*01  47   ....................................C........G............C............................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  T  G  I  S  G  S  G  E  N  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_7767   91   AGTGGGTCACAGGTATCAGTGGTAGTGGTGAAAACACATACTACGCAGACTCCGTGAAGGGCCGTTTCACCGTCTCCAGAGACAATTCCA  180
V  93.1% (228/245)  IGHV3-23*01  137  ........T...C...T.............GT.G..............................G......A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  T  V  S  V  Q  M  D  S  L  S  A  E  D  T  A  V  Y  Y  C  A  S  T  L  L  D  K  W  G  
                    Query_7767   181  AGAACACGGTGTCTGTGCAAATGGACAGCCTGAGCGCCGAGGACACGGCCGTATATTACTGTGCGTCGACCCTGCTTGACAAATGGGGCC  270
V  93.1% (228/245)  IGHV3-23*01  227  ........C...A.C........A..........A..............................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  92.9% (39/42)    IGHJ4*02     7    ---------------------------------------------------------------------------.....T.C.......  21

                                                                 
                                      Q  G  T  L  V  T  V  S  P  
                    Query_7767   271  AGGGAACCCTGGTCACCGTCTCCCCAG  297
J  92.9% (39/42)    IGHJ4*02     22   .......................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_6173

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           325     3e-91
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGGGAA	AACGAC	TGGGATCGTAGGTGGTCCGGT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGGGAAAACGACTGGGATCGTAGGTGGTCCGGTTTTCACTTC	ASRENDWDRRWSGFHF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7768   1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.0% (225/242)  IGHV4-59*08  49   ....................T......................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       L  I  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S  R  N 
                    Query_7768   91   TTGATTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGTCGACTCACCATCTCAGTAGACACGTCGAGGAAC  180
V  93.0% (225/242)  IGHV4-59*08  139  .G......G...A........A........A.....................A.......G.......A..............C.A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  S  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  N  D  W  D  R  R  W 
                    Query_7768   181  CAGTTCTCCCTGAGCGTGAACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCGAGCCGGGAAAACGACTGGGATCGTAGGTGG  270
V  93.0% (225/242)  IGHV4-59*08  229  .............AGC...G.........C................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD1-1*01   12   ---------------------------------------------------------------------......---------------  17

                                      -------------->                                  
                                       S  G  F  H  F  W  G  P  G  T  L  V  T  V  S  S  
                    Query_7768   271  TCCGGTTTTCACTTCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  319
J  93.0% (40/43)    IGHJ4*02     6    ------...G...A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_6172

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           371     6e-105
IGHD3-10*01                                                                                           19.9    0.15  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	TTCG	CTATGTTTCGGGG	TTCAGGG	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCATTCGCTATGTTTCGGGGTTCAGGGGGTATGGACGTC	AFAMFRGSGGMDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	241	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7769   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  98.4% (241/245)  IGHV3-74*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  K  S  D  G  S  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7769   91   TGTGGGTCTCACGTATTAAGAGTGATGGGAGTAGCACATACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (241/245)  IGHV3-74*01  137  ...................T..................AG..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  F  A  M  F  R  G  S  G  
                    Query_7769   181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCATTCGCTATGTTTCGGGGTTCAGGGG  270
V  98.4% (241/245)  IGHV3-74*01  227  .......G.........................................................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.3% (12/13)    IGHD3-10*01  7    ---------------------------------------------------------------------.....G.......--------  19
J  100.0% (45/45)   IGHJ6*02     18   -----------------------------------------------------------------------------------------.  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7769   271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (45/45)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_6170

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD2-2*01                                                                                            14.1    8.5   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCACCA	CTATGCC	TATGCCAGCGGGGGATATG	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACCACTATGCCTATGCCAGCGGGGGATATGTTGAGTCC	ARGHHYAYASGGYVES	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  T  W  I  R  Q  H  P  G  K  A 
                    Query_7770   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGCC  90
V  97.2% (243/250)  IGHV4-31*03  49   .............................................................G..........................G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       P  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  T  S 
                    Query_7770   91   CCGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCAGTAGACACGTCT  180
V  97.2% (243/250)  IGHV4-31*03  139  .T..................................................................T.C...................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  H  Y  A  Y  A 
                    Query_7770   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGGTCACCACTATGCCTATGCC  270
V  97.2% (243/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD2-2*01   25   -----------------------------------------------------------------------------.......------  31

                                      GT------------------>                                  
                                       S  G  G  Y  V  E  S  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_7770   271  AGCGGGGGATATGTTGAGTCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  325
J  92.9% (39/42)    IGHJ4*02     7    -------------....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_6177

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           268     6e-74
IGHD3-16*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAGGCCCCGG	TTACCTTTGGGGGAGT	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGAGGCCCCGGTTACCTTTGGGGGAGTCTAC	ARDEAPVTFGGVY	230	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	47	4	0	92.2
CDR2-IMGT	92	115	24	19	5	0	79.2
FR3-IMGT	116	229	114	101	13	0	88.6
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	198	27	0	88


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  V  S  D  S  G  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  L  A  A  I  W  Y  D
                    Query_7771   13   GTCTGGATTCACCGTCAGTGATTCTGGCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGCTGGCTGCTATTTGGTATGA  102
V  88.0% (198/225)  IGHV3-33*01  72   .............T.....AGC.A......G.......................................G....A.T...A........  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  D  K  K  F  Y  T  D  S  V  K  D  R  F  T  I  S  R  D  N  Y  R  N  T  V  Y  L  Q  M  D
                    Query_7771   103  TGGGGATAAAAAATTCTATACAGACTCCGTGAAGGACCGATTCACCATCTCCAGAGACAATTACAGGAATACGGTGTACCTGCAAATGGA  192
V  88.0% (198/225)  IGHV3-33*01  162  ...AAG...T....A....G...............G..........................C..A...C...C....T.........A.  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------CDR3-IMGT-------------->              
                                        G  L  R  A  D  D  T  G  V  Y  Y  C  A  R  D  E  A  P  V  T  F  G  G  V  Y  W  G  Q  G  T
                    Query_7771   193  CGGCCTGAGAGCCGACGACACGGGTGTCTATTACTGTGCGAGAGATGAGGCCCCGGTTACCTTTGGGGGAGTCTACTGGGGCCAGGGAAC  282
V  88.0% (198/225)  IGHV3-33*01  252  .A.............G.......C...G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  93.8% (15/16)    IGHD3-16*01  10   --------------------------------------------------------....G...........------------------  25
J  100.0% (38/38)   IGHJ4*02     11   ------------------------------------------------------------------------..................  28

                                                          
                                        L  V  T  V  S  S  
                    Query_7771   283  CCTGGTCACCGTCTCCTCAG  302
J  100.0% (38/38)   IGHJ4*02     29   ....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_6176

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           416     2e-118
IGHD2-2*01                                                                                            10.3    135   
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCAAGGC	ACCAG	TTCCCTCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCAAGGCACCAGTTCCCTCTTACTTTGACTAC	ARDPKAPVPSYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  F  T  Y 
                    Query_7772   2    CAGCTGGTGCAGTCTGGAGCCGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCCGGTTACACCTTTTTCACCTAC  91
V  95.9% (278/290)  IGHV1-18*04  7    ....................T...............................................T............AC..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  S  N  Y  A  Q 
                    Query_7772   92   GGCATCCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACTCAAACTATGCACAG  181
V  95.9% (278/290)  IGHV1-18*04  97   ..T...AG...................................................................A..............  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  Y  D  D  T  A 
                    Query_7772   182  AAACTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTCAGATATGACGACACGGCC  271
V  95.9% (278/290)  IGHV1-18*04  187  ..G....................................................................G....C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  D  P  K  A  P  V  P  S  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7772   272  GTGTATTACTGTGCGAGAGATCCCAAGGCACCAGTTCCCTCTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  95.9% (278/290)  IGHV1-18*04  277  ....................--------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (5/5)     IGHD2-2*01   17   -----------------------------.....------------------------------------------------------  21
J  100.0% (46/46)   IGHJ4*02     3    ------------------------------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_6174

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD6-25*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTC	ARQSSAGRTKYGMDV	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	69	5	0	93.2
CDR1-IMGT	76	99	24	18	6	0	75
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	279	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  S  S  G  Y  D  F  L  
                    Query_7773   2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGAGTTCTGGATACGACTTTCTCG  91
V  94.6% (279/295)  IGHV5-51*01  2    ....G.....G.......................A.....C...........................G...........AG....AC.A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_7773   92   ACTACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACA  181
V  94.6% (279/295)  IGHV5-51*01  92   G...........G.......................................................................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_7773   182  GCCCGTCATTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGAACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  94.6% (279/295)  IGHV5-51*01  182  .......C.........................................C........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  M  V  T  V  
                    Query_7773   272  CCGCCAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCT  361
V  94.6% (279/295)  IGHV5-51*01  272  ......T..................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD6-25*01  7    --------------------------.......---------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -----------------------------------------------...............................C...........  57

                                           
                                      S  S 
                    Query_7773   362  CCTCA  366
J  97.9% (47/48)    IGHJ6*02     58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_178797

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           357     1e-100
IGHD6-25*01                                                                                           12.2    35    
IGHJ3*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-25*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACT	CGGCTA	AGGTATCGC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTCGGCTAAGGTATCGCTTTGACATA	ATTRLRYRFDI	292	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	71	4	0	94.7
CDR1-IMGT	79	102	24	18	6	0	75
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	100	14	0	87.7
CDR3-IMGT (germline)	292	295	4	4	0	0	100
Total	N/A	N/A	292	260	32	0	89


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  P  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T 
                    Query_7774   4    CAGGTGCAGCTGGTGCAGTCTGGACCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCATGTAAGGCTTCTGGATATATCTTCACC  93
V  89.0% (260/292)  IGHV1-18*01  1    .....T..................G.....................................C..C...........T..C.C...T...  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  S  W  V  R  Q  T  P  G  E  G  L  E  W  M  G  W  I  S  T  Y  H  E  N  T  E  Y 
                    Query_7774   94   AGTTATGGCATTAGTTGGGTGCGACAGACCCCTGGAGAAGGGCTTGAGTGGATGGGATGGATCAGCACTTACCATGAAAACACAGAGTAT  183
V  89.0% (260/292)  IGHV1-18*01  91   ..C.....T..C..C............G........C.............................G.....A...GT......A.C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  Q  K  L  Q  G  R  V  T  I  T  A  D  T  S  T  S  T  A  Y  M  E  L  R  G  L  R  S  D  D 
                    Query_7774   184  TCACAGAAGTTGCAGGGCAGAGTCACCATTACCGCAGACACATCCACGAGTACAGCCTACATGGAGTTGAGGGGCCTCAGATCTGACGAC  273
V  89.0% (260/292)  IGHV1-18*01  181  G........C.C.................G...A................C...............C.....A....G............  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------CDR3-IMGT----------->                                  
                                       T  A  L  Y  F  G  A  T  T  R  L  R  Y  R  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7774   274  ACGGCCCTGTATTTCGGTGCGACGACTCGGCTAAGGTATCGCTTTGACATATGGGGCCAAGGGACAATGGTCACCGTCTCCTCAG  358
V  89.0% (260/292)  IGHV1-18*01  271  ......G......A.T......---------------------------------------------------------------  292
                                       T  A  V  Y  Y  C  A                                                                 
D  100.0% (6/6)     IGHD6-25*01  12   ---------------------------......----------------------------------------------------  17
J  93.0% (40/43)    IGHJ3*02     8    ------------------------------------------.....T..C.............................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_178794

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           310     1e-86
IGHD5-12*01                                                                                           12.2    30   
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCC	GTGGAT	TAAGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCGTGGATTAAGCTTC	ATRGLSF	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  D  M  N  W  L  R  Q  A  P  G  K  G  P  
                    Query_7775   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACTTTCAGTAATTACGACATGAACTGGCTCCGCCAGGCTCCTGGGAAGGGGCCGG  90
V  90.2% (222/246)  IGHV3-48*03  47   .....................C...............C.......G...T..A.........G.............A..........T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  D  I  T  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_7775   91   AGTGGGTCTCATCCATTAGTAGTCGTGGAGATATCACATACTACGCGGACTCAGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.2% (222/246)  IGHV3-48*03  137  .......T....A..........A....TAG..C..T.........A.....T...A.................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  S  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  T  R  G  L  S  F  W  G  
                    Query_7775   181  AGAACTCACTGTCCCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTCTTTATTACTGTGCGACCCGTGGATTAAGCTTCTGGGGCC  270
V  90.2% (222/246)  IGHV3-48*03  227  ............AT......................C...G.........G...............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD5-12*01  1    ---------------------------------------------------------------------......---------------  6
J  93.9% (31/33)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                               
                                      Q  G  A  Q  V  T  V  S  S
                    Query_7775   271  AGGGAGCCCAGGTCACCGTCTCCTC  295
J  93.9% (31/33)    IGHJ4*02     22   .....A...T...............  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_78286

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            353     9e-100
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              110     2e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGG	GTATAGCAGCTCG	ATCGTTA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTATAGCAGCTCGATCGTTATACTACTACTACGGTATGGACGTC	ARGGIAARSLYYYYGMDV	237	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	24	0	0	100
FR3-IMGT	123	236	114	112	2	0	98.2
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	232	229	3	0	98.7


Alignments

                                     <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                      C  A  A  S  R  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 
                    Query_7776  12   TGTGCAGCCTCTAGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATA  101
V  98.7% (229/232)  IGHV3-7*01  64   ............G.............................................................................  153
                                      C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                     -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                      K  Q  D  G  S  E  K  Y  N  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_7776  102  AAGCAAGATGGAAGTGAGAAATACAATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTG  191
V  98.7% (229/232)  IGHV3-7*01  154  ........................T.................................................................  243
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                     --------------------------------------------><----------------------CDR3-IMGT-------------
                                      Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  G  I  A  A  R  S  L  Y  Y  Y  Y  G 
                    Query_7776  192  CAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGGGTATAGCAGCTCGATCGTTATACTACTACTACGGT  281
V  98.7% (229/232)  IGHV3-7*01  244  ...................C................................--------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (13/13)   IGHD6-6*01  3    -------------------------------------------------------.............----------------------  15
J  100.0% (57/57)   IGHJ6*02    6    ---------------------------------------------------------------------------...............  20

                                     -------->                                 
                                      M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7776  282  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  100.0% (57/57)   IGHJ6*02    21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_178791

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           335     4e-94
IGHD6-25*01                                                                                           12.2    31   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-25*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGGG	GCATCGGCT	GAGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGGGCATCGGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
Total	N/A	N/A	242	228	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7777   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.2% (228/242)  IGHV3-33*03  47   .....................................C..C.....C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  K  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_7777   91   AGTGGGTGGCAGTTATATGGTATGATGGAATTAAAAAATACTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCA  180
V  94.2% (228/242)  IGHV3-33*03  137  ..............................G...T..........C.....................................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_7777   181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGGGCATCGGCTGAGGGGTGGTTCG  270
V  94.2% (228/242)  IGHV3-33*03  227  .......G....A......A..............................G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  88.9% (8/9)      IGHD6-25*01  8    --------------------------------------------------------------------...G.....-------------  16
J  100.0% (46/46)   IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7777   271  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (46/46)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_178790

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_7778   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  97.6% (282/289)  IGHV5-51*03  6    ..............................................................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  K  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_7778   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGAAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  97.6% (282/289)  IGHV5-51*03  96   ........................................G..........G............................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  A
                    Query_7778   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACCCCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  .....................................................................................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7778   271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  97.6% (282/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_178799

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           332     3e-93
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	N/A	GTCTCCCGGAGACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGAGTCTCCCGGAGACGACTACAACGGTATGGACGTC	VKESPGDDYNGMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  R  S  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7779   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGGTTCAGAAGTTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-30*18  47   ....................................CC.....T..C.A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  L  Y  D  G  S  K  T  N  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7779   91   AGTGGGTGGCAGTCATATTATATGATGGAAGTAAAACAAACTATGGAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  92.4% (231/250)  IGHV3-30*18  137  .............T....C...............T.A.T......C......C................................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  T  Y  Y  C  V  K  E  S  P  G  D  D  Y  
                    Query_7779   181  AGAATACGCTGTATCTGCAAATGAACAGCCTAAGAGCTGAGGACACGGCTACATATTACTGTGTGAAAGAGTCTCCCGGAGACGACTACA  270
V  92.4% (231/250)  IGHV3-30*18  227  ....C..........................G..................GTG..........C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
J  96.2% (51/53)    IGHJ6*02     10   ------------------------------------------------------------------------------------.....T  15

                                      ------------->                                 
                                      N  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7779   271  ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  317
J  96.2% (51/53)    IGHJ6*02     16   ...........................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_311478

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     1e-124
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_7780   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  98.3% (284/289)  IGHV5-51*01  6    .............................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_7780   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7780   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7780   271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_7780   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_299399

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTCC	AALIAASHFTDS	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	46	5	0	90.2
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	104	10	0	91.2
CDR3-IMGT (germline)	289	291	3	3	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_7781   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCA  91
V  93.4% (271/290)  IGHV5-51*01  2    ......................................................A...............T...................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  V  P  G  K  G  F  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_7781   92   CCTACTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCTTTGAGTTGATGGGGATCATCTATCCTGGTGACTCTGACACCAGATACA  181
V  93.4% (271/290)  IGHV5-51*01  92   G.........................A.......G......C.G....G..............................T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  I  I  P  A  H  K  S  V  N  T  A  Y  L  Q  W  S  P  L  K  A  S  D  
                    Query_7781   182  GTCCGTCCTTCCAAGGCCAGGTCATCATCCCAGCCCACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCCCCCTGAAGGCCTCGGACC  271
V  93.4% (271/290)  IGHV5-51*01  182  .C......................C....T.....G........A...G......................AG................A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      P  A  M  Y  Y  W  A  A  L  I  A  A  S  H  F  T  D  S  W  G  P  G  T  L  V  T  V  S  S  
                    Query_7781   272  CCGCCATGTATTACTGGGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTCCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  358
V  93.4% (271/290)  IGHV5-51*01  272  ................T...-------------------------------------------------------------------  291
                                      T  A  M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    -------------------------...A.....-----------------------------------------------------  12
J  95.1% (39/41)    IGHJ4*02     8    ----------------------------------------------.....A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_299397

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           352     3e-99
IGHD2-15*01                                                                                           21.8    0.041
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGAC	TAGTGGTGGGAGCT	ACAGTTGGGA	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGACTAGTGGTGGGAGCTACAGTTGGGATTTTGATCTC	AKGTSGGSYSWDFDL	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  E  F  T  F  S  S  Y  S  M  S  W  V  R  H  A  P  G  K  G  L  
                    Query_7782   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGAATTTACCTTTAGTAGCTATAGCATGAGTTGGGTCCGCCACGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-23*01  47   ..............................G...C........C......GC......C...........G...................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  V  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7782   91   AGTGGGTCTCAGCTATTGTTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (237/249)  IGHV3-23*01  137  .................AG.......................................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  G  T  S  G  G  S  Y  
                    Query_7782   181  AGAACACGCTGTATCTGGAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTTTATTACTGTGCGAAAGGGACTAGTGGTGGGAGCTACA  270
V  95.2% (237/249)  IGHV3-23*01  227  .................C..................C...............A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD2-15*01  10   -------------------------------------------------------------------------.........T....---  23

                                      ---------------->                                  
                                      S  W  D  F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7782   271  GTTGGGATTTTGATCTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  97.7% (43/44)    IGHJ3*01     7    -------.......G....................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_299396

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     3e-93
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGGGTCCT	TATAGTGGGAGC	CCGCAAGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACTTC	AKPGPYSGSPQGYFDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7783   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTTCGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (230/248)  IGHV3-23*01  47   .............................................G..AT........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  T  E  T  G  R  N  S  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  
                    Query_7783   91   AGTGGGTCTCAACTATTACTGAGACTGGTCGTAATTCATACTACGCAGACTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCA  180
V  92.7% (230/248)  IGHV3-23*01  137  ...........G......G..GT.G....G...GCA............................G....C...............T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  G  P  Y  S  G  S  
                    Query_7783   181  AGAACACACTGTATCTGCAAATGAACACCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAACCGGGTCCTTATAGTGGGAGCC  270
V  92.7% (230/248)  IGHV3-23*01  227  .......G...................G........................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD1-26*01  3    -----------------------------------------------------------------------------............-  14

                                      T------------------>                                  
                                      P  Q  G  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7783   271  CGCAAGGGTACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.8% (45/46)    IGHJ4*02     3    --------..........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_299394

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           280     1e-77
IGHD6-25*01                                                                                           18.0    0.59 
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTG	GCAGCGGCT	GCCACGAACTTCTATCACGACGAAC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCTGGCAGCGGCTGCCACGAACTTCTATCACGACGAACTGGACGTC	VRDLAAAATNFYHDELDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	13	8	0	61.9
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	212	33	0	86.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  P  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7784   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCCCTGGCTTCTACTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  86.5% (212/245)  IGHV4-59*01  49   .............................T.........AG.A.T.A...........................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  F  Y  Y  N  G  E  S  N  Y  N  P  S  L  K  S  R  V  S  I  S  L  D  M  S  K  S 
                    Query_7784   91   TGGATTGGCCACTTCTACTACAATGGCGAGTCCAACTACAATCCCTCCCTCAAGAGTCGAGTCTCCATTTCTCTGGACATGTCCAAGAGT  180
V  86.5% (212/245)  IGHV4-59*01  139  ........GT.TA....T....G...GAGCA..........C.....................A....A..AG.A....C........AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  F  T  S  V  T  A  A  D  T  A  V  Y  F  C  V  R  D  L  A  A  A  A  T  N  F 
                    Query_7784   181  CAGTTCTCCCTGAAGTTCACTTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGTGAGAGATCTGGCAGCGGCTGCCACGAACTTC  270
V  86.5% (212/245)  IGHV4-59*01  229  ...............C.G.GC...............................A.....C......-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-25*01  8    ---------------------------------------------------------------------.........------------  16

                                      -------------------->                                 
                                       Y  H  D  E  L  D  V  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_7784   271  TATCACGACGAACTGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTCA  324
J  97.6% (40/41)    IGHJ6*02     22   -------------........................C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_299393

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD6-19*01                                                                                           21.8    0.040
IGHJ5*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTCCCGC	GTATAGTAGTGGCT	ACGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTCCCGCGTATAGTAGTGGCTACGGCTGGTTCGGCTCC	ARDSPAYSSGYGWFGS	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  N  T  Y  Y  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_7785   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAATACTTACTACTGGAGTTGGATCCGGCAGACCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   ......................................C.G..G............C............C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_7785   91   TGGATTGGTTATATCTATTACACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G.............G.....G...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  T  L  R  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  D  S  P  A  Y  S  S  G  Y 
                    Query_7785   181  CAGTTCTCCCTGACGCTGAGGTCTGTGAGCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGATTCTCCCGCGTATAGTAGTGGCTAC  270
V  94.3% (231/245)  IGHV4-59*01  229  .............A......C.......C..................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  3    --------------------------------------------------------------------------......C.......--  16

                                      -------------->                                  
                                       G  W  F  G  S  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_7785   271  GGCTGGTTCGGCTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  319
J  93.6% (44/47)    IGHJ5*01     5    --........A............A.....................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_299392

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     1e-109
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	291	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	66	5	0	93
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	297	7	6	1	0	85.7
Total	N/A	N/A	291	269	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  
                    Query_7786   7    TGCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATC  96
V  92.4% (269/291)  IGHV5-51*01  5    .....................C........A.....................G.........A......C.........C.......GCT  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      H  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  
                    Query_7786   97   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCC  186
V  92.4% (269/291)  IGHV5-51*01  95   ....................................................G.......A.....G.......G....C.....C....  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  
                    Query_7786   187  CGTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCG  276
V  92.4% (269/291)  IGHV5-51*01  185  ................G........C...................................G.......G....................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------CDR3-IMGT----------->                                  
                                      A  L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_7786   277  CCTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  357
V  92.4% (269/291)  IGHV5-51*01  275  ..A.......C.....G....------------------------------------------------------------  295
                                      A  M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   -----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    ------------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_299390

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           330     1e-92
IGHD2-21*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCGCCGGGAC	GGTGGTAATT	CCCCTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCGCCGGGACGGTGGTAATTCCCCTATTGACTAC	ARPRRDGGNSPIDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  T  D  G  Y  Y  W  S  W  I  R  Q  F  P  G  K  G 
                    Query_7787   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGAACTGATGGTTACTACTGGAGCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  92.4% (230/249)  IGHV4-31*03  49   .........................................C.G..G............................CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  Y  H  T  G  S  T  Y  Y  T  P  S  V  R  G  R  V  T  M  S  V  D  T  S 
                    Query_7787   91   CTGGAGTGGATTGGGTTCATCTATCACACTGGGAGCACCTACTACACCCCGTCCGTCCGGGGTCGAGTCACCATGTCAGTGGACACGTCT  180
V  92.4% (230/249)  IGHV4-31*03  139  ................A.......T...G.................A.......C..AA.A.......T.....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  R  R  D  G  G  N 
                    Query_7787   181  AAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGACCTCGCCGGGACGGTGGTAAT  270
V  92.4% (230/249)  IGHV4-31*03  229  ...................A.....G...........................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD2-21*01  11   ---------------------------------------------------------------------------------......G..  19

                                      -------------->                                  
                                       S  P  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7787   271  TCCCCTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
D  90.0% (9/10)     IGHD2-21*01  20   .------------------------------------------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_148086

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           439     2e-125
IGHD6-13*01                                                                                           12.2    36    
IGHJ3*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGGAAGCGGGCCGCACA	TGGTAC	GC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGGAAGCGGGCCGCACATGGTACGCCTTTTGATATC	AWKRAAHGTPFDI	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	71	0	0	100
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	112	2	0	98.2
CDR3-IMGT (germline)	292	294	3	3	0	0	100
Total	N/A	N/A	287	284	3	0	99


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  
                    Query_7788   8    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCACCT  97
V  99.0% (284/287)  IGHV5-51*01  5    .......................................................................................G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  
                    Query_7788   98   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCC  187
V  99.0% (284/287)  IGHV5-51*01  95   ..........................................................................................  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_7788   188  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCG  277
V  99.0% (284/287)  IGHV5-51*01  185  .............................................G............................................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><--------------CDR3-IMGT-------------->                                  
                                      A  I  Y  Y  C  A  W  K  R  A  A  H  G  T  P  F  D  I  W  G  Q  G  T  M  V  S  V  S  S  
                    Query_7788   278  CCATTTATTACTGTGCGTGGAAGCGGGCCGCACATGGTACGCCTTTTGATATCTGGGGCCAGGGGACTATGGTCAGCGTCTCTTCAG  364
V  99.0% (284/287)  IGHV5-51*01  275  ....G............----------------------------------------------------------------------  291
                                      A  M  Y  Y  C  A                                                                       
D  100.0% (6/6)     IGHD6-13*01  16   ----------------------------------......-----------------------------------------------  21
J  93.3% (42/45)    IGHJ3*02     6    ------------------------------------------...................A.....A.......C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_78284

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           347     7e-98
IGHD4-17*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGTAGGG	ACGGTGACTAC	GGGGCGGGGCTTGAACAA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCGTAGGGACGGTGACTACGGGGCGGGGCTTGAACAA	ARERRDGDYGAGLEQ	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7789   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTAAGTTCCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-33*01  47   ........................................C...AG.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  W  Y  D  G  I  N  K  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  E  S  
                    Query_7789   91   AGTGGGTGTCAGTTATATGGTATGATGGAATTAATAAATACTATGCAGACGCCGTGAAGGGCCGATTCACCATCTCCAGAGACGAATCCA  180
V  94.4% (236/250)  IGHV3-33*01  137  ........G.....................G...................T................................A.T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  T  M  H  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  R  R  D  G  D  Y  
                    Query_7789   181  GGAACACGATGCATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGCGAGAGAGCGTAGGGACGGTGACTACG  270
V  94.4% (236/250)  IGHV3-33*01  227  A.......C..T......................................G.G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD4-17*01  6    ------------------------------------------------------------------------------...........-  16

                                      ---------------->                                  
                                      G  A  G  L  E  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7789   271  GGGCGGGGCTTGAACAATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (34/34)   IGHJ4*02     15   -----------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_337792

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           333     1e-93
IGHD3-10*01                                                                                           12.2    30   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAAAGTCAGGC	CGGGGA	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAAGTCAGGCCGGGGATTTGACTTC	AKKSGRGFDF	237	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	108	6	0	94.7
CDR3-IMGT (germline)	237	240	4	4	0	0	100
Total	N/A	N/A	229	221	8	0	96.5


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 
                    Query_7790   12   TGTGCAGCCTCTGGATTCACCTTCAGTAATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATT  101
V  96.5% (221/229)  IGHV3-48*03  64   ............................G.............................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  S  G  S  I  I  Y  Y  A  D  S  V  K  G  R  F  A  I  S  R  D  Y  S  K  N  S  L  Y  L 
                    Query_7790   102  AGTAGTAGTGGTAGTATCATATATTACGCAGACTCTGTGAAGGGCCGATTCGCCATCTCCAGAGACTACTCCAAAAACTCTCTGTATCTG  191
V  96.5% (221/229)  IGHV3-48*03  154  ................C......C...........................A..............A..G....G.....A.........  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------CDR3-IMGT--------->               
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  K  S  G  R  G  F  D  F  W  G  Q  G  T 
                    Query_7790   192  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAAAAAGTCAGGCCGGGGATTTGACTTCTGGGGCCAGGGAACC  281
V  96.5% (221/229)  IGHV3-48*03  244  .................................................-----------------------------------------  292
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  100.0% (6/6)     IGHD3-10*01  15   ------------------------------------------------------------......------------------------  20
J  97.6% (40/41)    IGHJ4*02     6    ------------------------------------------------------------------.......A................  29

                                                       
                                       L  V  T  V  S  S
                    Query_7790   282  CTGGTCACCGTCTCCTC  298
J  97.6% (40/41)    IGHJ4*02     30   .................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_172144

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     7e-91
IGHD3-10*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	224	17	0	92.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_7791   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAGT  93
V  92.9% (224/241)  IGHV4-59*01  50   .....TCC...A....C........................AG..............................A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_7791   94   GGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  92.9% (224/241)  IGHV4-59*01  140  ...............AT........G.G..............................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W  
                    Query_7791   184  AGTTCTCCCTGAGACTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGC  273
V  92.9% (224/241)  IGHV4-59*01  230  ............AG.....C.........G................G..............-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  93.3% (14/15)    IGHD3-10*01  11   -----------------------------------------------------------------..........G....----------  25
J  97.9% (46/47)    IGHJ5*02     5    -------------------------------------------------------------------------------------....T  9

                                      ------->                                  
                                      L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7791   274  TCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.9% (46/47)    IGHJ5*02     10   ..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_146274

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           330     1e-92
IGHD1-26*01                                                                                           12.2    35   
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TA	GAGCTA	ATCGGGGGCAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAGAGCTAATCGGGGGCAGTTTGACTAC	ASRANRGQFDY	290	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	289	120	99	15	6	82.5
CDR3-IMGT (germline)	290	294	5	5	0	0	100
Total	N/A	N/A	293	254	33	6	86.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  V  K  V  S  C  K  A  V  G  K  N  F  F  S  Y 
                    Query_7792   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGACTCAGTGAAGGTCTCCTGCAAGGCTGTTGGTAAAAACTTTTTCAGTTAT  91
V  86.7% (254/293)  IGHV1-18*01  7    ........................................C.........................TC....T.C.C....AC...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  I  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  S  I  N  A  Y  D  S  K  T  H  Y  A  Q 
                    Query_7792   92   GGTATCATCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCGTCGATCAACGCGTACGATAGTAAGACACACTATGCACAG  181
V  86.7% (254/293)  IGHV1-18*01  97   .......G.........................................GA.G.....G...T...A..G....C...A...........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      --------------------------------------------FR3-IMGT--------------------------------------
                                       K  F  L  G  R  V  S  L  S  T  D  T  D  L  S  T  S  T  P  Y  M  E  V  R  G  L  T  Y  D  D 
                    Query_7792   182  AAGTTCCTGGGCAGAGTCTCCTTGAGCACAGATACAGATCTCTCCACGAGCACGCCCTATATGGAGGTGAGGGGCCTGACATATGACGAC  271
V  86.7% (254/293)  IGHV1-18*01  187  ...C...A..........A..A...C......C...------...........AG....C......C.....A......G..C.......  270
                                       K  L  Q  G  R  V  T  M  T  T  D  T        S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------CDR3-IMGT----------->                                  
                                       T  A  V  Y  Y  C  A  S  R  A  N  R  G  Q  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_7792   272  ACGGCCGTCTATTACTGTGCGAGTAGAGCTAATCGGGGGCAGTTTGACTACTGGGGCCAGGGAACCCTGGTCAGCGTCTCCTCAG  356
V  86.7% (254/293)  IGHV1-18*01  271  ........G..............--------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                 
D  100.0% (6/6)     IGHD1-26*01  11   -------------------------......------------------------------------------------------  16
J  97.7% (42/43)    IGHJ4*02     6    ------------------------------------------...............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_146277

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD5-18*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  F  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7793   1    ACCCTGTTCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  97.9% (238/243)  IGHV4-59*01  49   .......C..............................................................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7793   91   TGGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  .........T................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_7793   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTAC  270
V  97.9% (238/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (18/20)    IGHD5-18*01  1    ----------------------------------------------------------------..........C.....T...------  20
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  T  
                    Query_7793   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCACAG  313
J  97.9% (47/48)    IGHJ4*02     6    .......................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_122568

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         304     9e-85
IGHD3-22*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTGGGT	TAGGGGTTAT	AAGGGTTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTGGGTTAGGGGTTATAAGGGTTTCTTTGACTAC	ARDPWVRGYKGFFDY	237	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	20	4	0	83.3
FR3-IMGT	123	236	114	102	12	0	89.5
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	232	213	19	0	91.8


Alignments

                                        <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                           T  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_7794     13   GTACAGCCTCTGGATTCACCTTCAGTAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGGAGTGGGTGGCAGTTATCT  102
V  91.8% (213/232)  IGHV3-30-3*01  65   ..G.........................C......................................G....................A.  154
                                           A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                        ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                        S  Y  D  E  N  Y  K  Y  Y  T  D  S  L  K  G  R  F  T  I  S  R  D  N  S  R  N  T  L  Y  L  
                    Query_7794     103  CATATGATGAAAACTATAAATATTACACGGACTCCCTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGAACACCCTGTATCTGC  192
V  91.8% (213/232)  IGHV3-30-3*01  155  .........G..G.A.......C...G.A......G....................................A......G..........  244
                                        S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                        -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                        Q  M  N  T  L  T  L  D  D  T  A  V  Y  Y  C  A  R  D  P  W  V  R  G  Y  K  G  F  F  D  Y  
                    Query_7794     193  AGATGAACACCCTGACACTTGACGACACGGCTGTGTATTACTGTGCGAGAGATCCTTGGGTTAGGGGTTATAAGGGTTTCTTTGACTACT  282
V  91.8% (213/232)  IGHV3-30-3*01  245  .A.......G.....G.GC...G.............................--------------------------------------  296
                                        Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  90.0% (9/10)     IGHD3-22*01    16   -------------------------------------------------------------...T......-------------------  25
J  90.9% (40/44)    IGHJ4*02       5    -------------------------------------------------------------------------------...........  15

                                                                         
                                        W  G  Q  G  S  L  V  I  V  S  S  
                    Query_7794     283  GGGGCCAGGGAAGTCTGGTCATTGTCTCCTCAG  315
J  90.9% (40/44)    IGHJ4*02       16   ............CC.......CC..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_146271

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            271     6e-75
IGHD6-19*01                                                                                           21.8    0.038
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGTG	GCAGTGGCTGG	ATA	ATGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGTGGCAGTGGCTGGATAATGGCCGTC	AGGSGWIMAV	237	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	18	6	0	75
FR2-IMGT	48	98	51	44	7	0	86.3
CDR2-IMGT	99	122	24	21	3	0	87.5
FR3-IMGT	123	236	114	104	10	0	91.2
CDR3-IMGT (germline)	237	239	3	3	0	0	100
Total	N/A	N/A	227	200	27	0	88.1


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  S  T  F  R  N  L  W  M  S  W  V  R  Q  I  P  G  K  G  L  E  W  M  A  D  I  
                    Query_7795   13   GTGCAGTCTCTGGATCCACATTTAGAAACCTTTGGATGAGTTGGGTCCGCCAGATCCCAGGGAAGGGTCTGGAGTGGATGGCCGACATAA  102
V  88.1% (200/227)  IGHV3-7*03   65   ......C........T...C.....T.G.TA.........C............GCT...........G.........G.....A......  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  E  D  G  S  E  I  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  V  D  L  
                    Query_7795   103  ACGAAGATGGAAGTGAGATAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAAAATTCAGTGGATCTGC  192
V  88.1% (200/227)  IGHV3-7*03   155  .GC...............A.T....................................................G..C...C..T......  244
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------CDR3-IMGT--------->                
                                      Q  M  N  S  L  G  V  E  D  S  A  V  Y  Y  C  A  G  G  S  G  W  I  M  A  V  W  G  Q  G  A  
                    Query_7795   193  AGATGAACAGCCTGGGAGTCGAGGACTCGGCCGTGTATTATTGTGCGGGTGGCAGTGGCTGGATAATGGCCGTCTGGGGCCAAGGGGCCA  282
V  88.1% (200/227)  IGHV3-7*03   245  .A............A...C.......A.............C......-------------------------------------------  291
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (11/11)   IGHD6-19*01  8    ---------------------------------------------------...........----------------------------  18
J  95.2% (40/42)    IGHJ6*02     21   -----------------------------------------------------------------....A................A...  45

                                                       
                                      T  V  T  V  S  S 
                    Query_7795   283  CGGTCACCGTCTCCTCA  299
J  95.2% (40/42)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_172141

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           311     4e-87
IGHD6-19*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAACGGCTGTAT	CAGTGACTGG	CACCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAACGGCTGTATCAGTGACTGGCACCCTTGACTAC	ARDRTAVSVTGTLDY	230	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	24	0	0	100
FR3-IMGT	116	229	114	108	6	0	94.7
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	212	13	0	94.2


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  N  Y  N  S  H  A  L  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_7796   13   GTCTGGATTCAACTACAATAGCCATGCCTTGCACTGGGTCCGCCAGGCTCCGGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  94.2% (212/225)  IGHV3-33*01  72   ...........C..T..G....T...G.A......................A......................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  E  D  S  V  R  G  R  F  G  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_7796   103  TGGAAGTAATAAATACTATGAAGACTCCGTGAGGGGCCGGTTCGGCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAA  192
V  94.2% (212/225)  IGHV3-33*01  162  ....................C...........A......A...AC.............................................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------CDR3-IMGT----------------->        
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  T  A  V  S  V  T  G  T  L  D  Y  W  G  Q
                    Query_7796   193  CAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATAGAACGGCTGTATCAGTGACTGGCACCCTTGACTACTGGGGCCA  282
V  94.2% (212/225)  IGHV3-33*01  252  ...C.........................................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  90.0% (9/10)     IGHD6-19*01  9    -----------------------------------------------------------.....G....---------------------  18
J  100.0% (42/42)   IGHJ4*02     7    --------------------------------------------------------------------------................  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_7796   283  GGGAACCCTGGTCACCGTCTCCTCAG  308
J  100.0% (42/42)   IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_172142

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           402     3e-114
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	TCCTCC	GGGTATATCAGTGGCTGG	GACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGATCCTCCGGGTATATCAGTGGCTGGGACGACTACAACGCTATGGACGTC	AGSSGYISGWDDYNAMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  F
                    Query_7797   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGTAGTTT  90
V  94.5% (273/289)  IGHV1-69*01  6    ....................................................................................C..C.A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  A  L  F  G  I  P  N  Y  A  Q
                    Query_7797   91   TGCTATCAGCTGGGTGCGACAGGCCCCAGGACAAGGGCTTGAGTGGATGGGAGGGATCATCGCTCTCTTTGGAATACCAAACTACGCACA  180
V  94.5% (273/289)  IGHV1-69*01  96   ...........................T.................................C..A.......T.C.G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        G  F  Q  G  R  V  M  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  A  A
                    Query_7797   181  GGGGTTCCAGGGCAGAGTCATGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTAAGATCTGAGGACGCGGC  270
V  94.5% (273/289)  IGHV1-69*01  186  .AA.................C...................................................G............A....  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  G  S  S  G  Y  I  S  G  W  D  D  Y  N  A  M  D  V  W  G  Q  G  T  T  V  T
                    Query_7797   271  CGTCTATTACTGTGCGGGATCCTCCGGGTATATCAGTGGCTGGGACGACTACAACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCAC  360
V  94.5% (273/289)  IGHV1-69*01  276  ...G............A..-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  94.4% (17/18)    IGHD6-19*01  1    -------------------------.......G..........-----------------------------------------------  18
J  96.2% (51/53)    IGHJ6*02     10   -----------------------------------------------.....T...G.................................  52

                                                
                                        V  S  S 
                    Query_7797   361  CGTCTCCTCA  370
J  96.2% (51/53)    IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_146272

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     5e-96
IGHD1-26*01                                                                                           10.3    125  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGGACACAGTTCTCGCGGCGC	CTACT	TACACCTCCGCG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGGACACAGTTCTCGCGGCGCCTACTTACACCTCCGCGATGGACGTC	AREKDTVLAAPTYTSAMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7798   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-21*01  47   .............................................G.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  G  S  I  Y  T  Y  Y  A  D  S  V  N  G  R  F  T  I  S  R  D  N  A  
                    Query_7798   91   AGTGGGTCTCTTCCATTAGTAGTGGGAGTATTTACACATACTACGCAGACTCAGTGAACGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.6% (234/250)  IGHV3-21*01  137  ..........A............A.T....G.....T.....................G...............................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  V  F  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  D  T  V  L  A  
                    Query_7798   181  AGAACTCGGTCTTTCTGCAATTGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTATTGCGCGAGAGAGAAGGACACAGTTCTCGCGG  270
V  93.6% (234/250)  IGHV3-21*01  227  .......AC.G.A.......A...............................G.....C..T........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      -IMGT----------------------->                                 
                                      A  P  T  Y  T  S  A  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_7798   271  CGCCTACTTACACCTCCGCGATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  332
D  100.0% (5/5)     IGHD1-26*01  14   ---.....------------------------------------------------------  18
J  97.6% (41/42)    IGHJ6*02     21   --------------------..............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_122563

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           439     2e-125
IGHD6-6*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	GTATAGCAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTATAGCAGCTCGTCCTTGGTCTGACTAC	ARGIAARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	285	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  P  K  I  S  C  K  G  S  G  Y  S  F  T  S  F
                    Query_7799   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCCGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTT  90
V  98.6% (285/289)  IGHV5-51*03  6    ...............................................T.........................................A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  L  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_7799   91   CTGGCTCGGCTGGGTGCGCCAGATGCCAGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.6% (285/289)  IGHV5-51*03  96   ....A......................C..............................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7799   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.6% (285/289)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  G  I  A  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7799   271  CATGTATTACTGTGCGAGAGGTATAGCAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  98.6% (285/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (16/16)   IGHD6-6*01   3    --------------------................-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_122562

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           310     1e-86
IGHD2-2*01                                                                                            23.8    0.011
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAACT	TATTGTACTAGTACC	CCCTGTTCTAAT	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAACTTATTGTACTAGTACCCCCTGTTCTAATTACGACGGTATGGACGTC	ARGTYCTSTPCSNYDGMDV	230	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	47	4	0	92.2
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	111	3	0	97.4
CDR3-IMGT (germline)	230	234	5	5	0	0	100
Total	N/A	N/A	222	210	12	0	94.6


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  T  Y  A  V  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  F  I  Y  Y  D
                    Query_7800   13   GTCTGGATTCACCTTCAGTACTTATGCCGTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGGAGTGGGTGGCATTCATATACTATGA  102
V  94.6% (210/222)  IGHV3-33*01  72   ....................GC....G.A...............................G...............G.T....GG.....  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  A  G  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  S
                    Query_7800   103  TGGAAGTAATAAATACTATGCAGGCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAG  192
V  94.6% (210/222)  IGHV3-33*01  162  .......................A.................................................................A  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------------CDR3-IMGT--------------------
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  T  Y  C  T  S  T  P  C  S  N  Y  D  G  M  D
                    Query_7800   193  CAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGGGGAACTTATTGTACTAGTACCCCCTGTTCTAATTACGACGGTATGGA  282
V  94.6% (210/222)  IGHV3-33*01  252  ...........................G..............------------------------------------------------  293
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                   
D  93.3% (14/15)    IGHD2-2*01   5    -------------------------------------------------.......G.......--------------------------  19
J  98.0% (50/51)    IGHJ6*02     12   ----------------------------------------------------------------------------...T..........  25

                                      --->                                 
                                        V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7800   283  CGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  319
J  98.0% (50/51)    IGHJ6*02     26   .....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_146279

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           343     2e-96
IGHD4-17*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGTATCT	TACGGTGAC	CCCACAAGTTACTCACGGTG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGGGTATCTTACGGTGACCCCACAAGTTACTCACGGTGTTGACTTC	VKGYLTVTPQVTHGVDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  V  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7801   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCGTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-23*01  47   ....................................C.T......G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  I  S  G  A  Y  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_7801   91   AGTGGGTCTCATCTATTAGTATTAGTGGTGCTTACACATACTACGTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAGTTCCA  180
V  94.0% (234/249)  IGHV3-23*01  137  ...........G........GG........G.AG...........C......................................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  A  E  V  T  A  I  Y  Y  C  V  K  G  Y  L  T  V  T  P  
                    Query_7801   181  AGAACACGCTGTATCTGCAAATGAGCAGCCTGAGAGCCGAGGTCACGGCCATATATTACTGTGTGAAAGGGTATCTTACGGTGACCCCAC  270
V  94.0% (234/249)  IGHV3-23*01  227  ........................A.................A.......G............C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD4-17*01  5    ----------------------------------------------------------------------------.........-----  13

                                      GT-------------------->                                  
                                      Q  V  T  H  G  V  D  F  W  G  L  G  T  L  A  T  V  S  S  
                    Query_7801   271  AAGTTACTCACGGTGTTGACTTCTGGGGCCTGGGAACCCTGGCCACCGTCTCCTCAG  327
J  92.9% (39/42)    IGHJ4*02     7    ---------------......A........A...........T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_146278

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           300     9e-84
IGHD2-21*01                                                                                           21.8    0.042
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-21*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	TCCGGCTCC	GCATCTTGTGGTGG	GGAAAACTCCTCGTCATGTTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGATCCGGCTCCGCATCTTGTGGTGGGGAAAACTCCTCGTCATGTTCTTGATGTC	VGDPAPHLVVGKTPRHVLDV	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	125	24	16	8	0	66.7
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	6	2	0	75
Total	N/A	N/A	232	212	20	0	91.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  Y  R  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  
                    Query_7802   16   GTGCAGCCTCTGGATTCACCTTCAGCAGCTATAGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGGAGTGGGTCTCCTCCATTA  105
V  91.4% (212/232)  IGHV3-21*01  65   .........................T........C................................G..............A.......  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  S  N  G  N  N  I  K  Y  A  D  S  M  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_7802   106  ATAGTAACGGAAATAATATAAAGTACGCAGACTCAATGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGC  195
V  91.4% (212/232)  IGHV3-21*01  155  G.....GTA.T.G.T.C...T.C............G......................................................  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-------------------------CDR3-IMGT-----------
                                      Q  L  N  S  L  R  A  E  D  T  G  V  Y  Y  C  V  G  D  P  A  P  H  L  V  V  G  K  T  P  R  
                    Query_7802   196  AACTGAACAGCCTGAGAGCCGAGGACACGGGTGTTTATTACTGTGTGGGAGATCCGGCTCCGCATCTTGTGGTGGGGAAAACTCCTCGTC  285
V  91.4% (212/232)  IGHV3-21*01  245  ..A...........................C...G..........C.A....--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  92.9% (13/14)    IGHD2-21*01  2    -------------------------------------------------------------....A.........---------------  15

                                      ------------->                                
                                      H  V  L  D  V  W  G  Q  G  T  M  V  S  V  S  S
                    Query_7802   286  ATGTTCTTGATGTCTGGGGCCAAGGGACAATGGTCAGCGTCTCTTC  331
J  97.5% (39/40)    IGHJ3*01     9    ------..............................C.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_122565

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           361     4e-102
IGHD3-22*01                                                                                           18.0    0.62  
IGHJ2*01                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTCAAACATT	TGATAGTGGTGCTTA	CGAGTTCCAGGACCCT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTCAAACATTTGATAGTGGTGCTTACGAGTTCCAGGACCCTTACTGGTACTTCGATCTC	AKVQTFDSGAYEFQDPYWYFDL	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  I  Y  D  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7803   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAATCTATGACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-23*01  47   ...........................................C.G.....C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7803   91   AGTGGGTCTCAGCTATCAGTGGGAGTGGTGGTACCACATATTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.4% (240/249)  IGHV3-23*01  137  ................T.....T..........G......C.................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  V  Q  T  F  D  S  G  
                    Query_7803   181  AGAACACGCTGTATCTACAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTTCAAACATTTGATAGTGGTG  270
V  96.4% (240/249)  IGHV3-23*01  227  ................G..A.................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  86.7% (13/15)    IGHD3-22*01  10   -------------------------------------------------------------------------------.......A...  20

                                      -CDR3-IMGT--------------------------->                                  
                                      A  Y  E  F  Q  D  P  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  F  S  S  
                    Query_7803   271  CTTACGAGTTCCAGGACCCTTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTTTCTCCTCAG  342
D  86.7% (13/15)    IGHD3-22*01  21   G...--------------------------------------------------------------------  24
J  98.1% (51/52)    IGHJ2*01     2    --------------------..........................................G.........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_122564

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     5e-96
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGG	AGCAGCAGCTGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGGAGCAGCAGCTGGTTGACTAC	ARDLEQQLVDY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	24	17	4	3	70.8
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	250	236	11	3	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7804   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCAGTAGTTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-21*01  47   ............................T.................C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  T  T  T     Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7804   91   AGTGGGTCTCATCCATTAGCACTACTACT---TACATATACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  177
V  94.4% (236/250)  IGHV3-21*01  137  ...................T.G..G..G.AGT..............A...........................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  S  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  E  Q  Q  L  V  
                    Query_7804   178  AGAGCTCAGTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGGAGCAGCAGCTGGTTG  267
V  94.4% (236/250)  IGHV3-21*01  227  ...A....C.....C.......................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD6-13*01  7    ---------------------------------------------------------------------------............---  18
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7804   268  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (42/42)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_125036

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           336     1e-94
IGHD3-3*01                                                                                            10.3    118  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATC	GAGTG	CCCTTCCAATTTG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCGAGTGCCCTTCCAATTTGACGGTATGGACGTC	ARNRVPFQFDGMDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7805   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTTCTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.2% (229/243)  IGHV4-59*08  49   .......................................A..AG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  N  G  Y  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_7805   91   TGGATTGGCTATATGTATTACAATGGGTACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGTCCAAGAAC  180
V  94.2% (229/243)  IGHV4-59*08  139  ........G.....C.......G....AG.......................................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       L  F  S  L  M  L  T  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  N  R  V  P  F  Q  F  D  G 
                    Query_7805   181  CTGTTCTCCCTGATGCTGACCTCTGTGACCTCCGCAGACACGGCCGTGTATTACTGTGCGAGAAATCGAGTGCCCTTCCAATTTGACGGT  270
V  94.2% (229/243)  IGHV4-59*08  229  .A...........A.....G..........G................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-3*01   16   -------------------------------------------------------------------.....------------------  20
J  95.7% (45/47)    IGHJ6*02     16   -------------------------------------------------------------------------------------.....  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_7805   271  ATGGACGTCTGGGGCCAAGGGACGACGGTCAGCGTCTCCTCA  312
J  95.7% (45/47)    IGHJ6*02     21   .......................C.......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_125037

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           367     5e-104
IGHD3-10*01                                                                                           19.9    0.15  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	TTCG	CTATGTTTCGGGG	TTCAGGG	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCATTCGCTATGTTTCGGGGTTCAGGGGGTATGGACGTC	AFAMFRGSGGMDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	240	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7806   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  98.0% (240/245)  IGHV3-74*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  K  S  D  G  S  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7806   91   TGTGGGTCTCACGTATTAAGAGTGATGGGAGTAGCACATACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.0% (240/245)  IGHV3-74*01  137  ...................T..................AG..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  P  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  F  A  M  F  R  G  S  G  
                    Query_7806   181  AGAACACACCGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCATTCGCTATGTTTCGGGGTTCAGGGG  270
V  98.0% (240/245)  IGHV3-74*01  227  .......G.T.......................................................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.3% (12/13)    IGHD3-10*01  7    ---------------------------------------------------------------------.....G.......--------  19
J  100.0% (45/45)   IGHJ6*02     18   -----------------------------------------------------------------------------------------.  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7806   271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (45/45)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_125032

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD6-19*01                                                                                           21.8    0.040
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	C	ATAGAAGTGGCTGG	CCGTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACATAGAAGTGGCTGGCCGTTTGATGCTTTCGAGATC	ARHRSGWPFDAFEI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  Y  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_7807   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATTATCACTACTGGAGCTGGATCCGGCAGTCTCCAGGGAAGGGACTGGAG  90
V  93.8% (228/243)  IGHV4-59*01  49   ........................................G.AG.T.......................C.C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  I  Y  N  P  S  L  E  S  R  V  T  I  S  A  D  T  S  K  K 
                    Query_7807   91   TGGATTGGCTATATCTATTACAGTGGGAGCACCATCTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAG  180
V  93.8% (228/243)  IGHV4-59*01  139  ........G.........................A................A.....................T...............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  A  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  R  S  G  W  P  F  D  A 
                    Query_7807   181  CAGTTCTCCCTGAAGCTGAGCGCTGTAACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGACATAGAAGTGGCTGGCCGTTTGATGCT  270
V  93.8% (228/243)  IGHV4-59*01  229  .....................T....G....................G............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  5    ----------------------------------------------------------------....C.........------------  18
J  88.0% (44/50)    IGHJ3*02     1    -----------------------------------------------------------------------------------.......  7

                                      -------->                                  
                                       F  E  I  W  G  Q  G  I  K  V  S  V  S  S  
                    Query_7807   271  TTCGAGATCTGGGGCCAGGGGATAAAGGTCTCCGTCTCTTCAG  313
J  88.0% (44/50)    IGHJ3*02     8    ..T..T...........A....C..T....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_125033

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           397     7e-113
IGHD1-1*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GTCC	ACAACTGG	CGGGAGGGGGCGTTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTCCACAACTGGCGGGAGGGGGCGTTCACTAC	GPQLAGGGVHY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	284	1	1	0	0	100
Total	N/A	N/A	284	269	15	0	94.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y
                    Query_7808   1    GCAGCTGGTGCAGTCTGGAGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGCAATTA  90
V  94.7% (269/284)  IGHV3-33*01  6    ..........G.......G.................................................................T.GC..  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  I  I  W  Y  D  G  S  N  K  H  Y  A  D
                    Query_7808   91   TGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAATTATATGGTATGATGGAAGTAACAAACACTATGCAGA  180
V  94.7% (269/284)  IGHV3-33*01  96   ....................................................G......................T...T..........  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  Q  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A
                    Query_7808   181  CTCCGTCCAGGGCCGATTCACCATATCCAGAGACAATTCCAAGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGC  270
V  94.7% (269/284)  IGHV3-33*01  186  ......GA................C........................C...........................C...G........  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        V  Y  Y  C  G  P  Q  L  A  G  G  G  V  H  Y  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_7808   271  TGTATATTACTGTGGTCCACAACTGGCGGGAGGGGGCGTTCACTACAGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  94.7% (269/284)  IGHV3-33*01  276  ...G..........------------------------------------------------------------------  289
                                        V  Y  Y  C                                                                    
D  100.0% (8/8)     IGHD1-1*01   4    ------------------........------------------------------------------------------  11
J  97.4% (38/39)    IGHJ4*02     10   -----------------------------------------.....T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_337797

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         338     5e-95
IGHD1-1*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCA	GTACAAC	AGTGGGAACTTCTTCCT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGCAGTACAACAGTGGGAACTTCTTCCTACTCCTTTGACTTC	ARDRSTTVGTSSYSFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  T  A  S  G  F  T  F  S  G  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7809     1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTGGATATGCAATGCACTGGGTCCGCCAGGCGCCAGGCAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-30-3*01  47   ....................G.......................A.C.....T....................T................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  F  D  G  N  N  K  Y  Y  S  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_7809     91   AGTGGGTGGCAGTTATATCATTTGATGGAAACAATAAATACTACTCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.2% (233/250)  IGHV3-30-3*01  137  .....................A........G.............G............A................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                        K  N  T  L  Y  L  R  M  T  S  L  R  P  E  D  T  A  M  F  F  C  A  R  D  R  S  T  T  V  G  
                    Query_7809     181  AGAACACACTCTATCTGCGAATGACCAGCCTGAGACCTGAGGACACGGCTATGTTTTTCTGTGCGAGAGATCGCAGTACAACAGTGGGAA  270
V  93.2% (233/250)  IGHV3-30-3*01  227  .......G..G.......A.....A..........G..............G...A..A............--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-1*01     2    ---------------------------------------------------------------------------.......--------  8

                                        GT-------------------->                                  
                                        T  S  S  Y  S  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7809     271  CTTCTTCCTACTCCTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  95.8% (46/48)    IGHJ4*02       1    ---------...A........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_125038

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD6-19*01                                                                                           12.2    30   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTGGC	GGCTGG	CTTAC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTGGCGGCTGGCTTACGGACGTC	TRGGGWLTDV	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7810   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTGGTTTCTACTGGAGCTGGATTCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   .............................T............A...A...............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  H  Y  S  G  H  T  N  Y  N  P  S  L  R  S  R  V  I  I  S  L  D  T  S  N  N 
                    Query_7810   91   TGGATTGGGAATATCCACTACAGTGGGCACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCATCATATCGCTGGACACGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  .........T.....T.T.........AG.......................A...........C......AG.A...........G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  I  S  L  K  V  N  S  G  T  A  A  D  T  A  L  Y  Y  C  T  R  G  G  G  W  L  T  D  V  W 
                    Query_7810   181  CAGATCTCCCTGAAGGTGAACTCTGGGACCGCTGCGGACACGGCCCTCTATTATTGTACGAGAGGTGGCGGCTGGCTTACGGACGTCTGG  270
V  90.6% (221/244)  IGHV4-59*01  229  ...T...........C...G.....T...................G.G.....C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  13   ---------------------------------------------------------------------......---------------  18
J  100.0% (40/40)   IGHJ6*02     23   --------------------------------------------------------------------------------..........  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_7810   271  GGCCAAGGGACCACGGTCACCGTCTCCTCA  300
J  100.0% (40/40)   IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_125039

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           311     4e-87
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	16	8	0	66.7
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	233	216	17	0	92.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 
                    Query_7811   13   TGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATT  102
V  92.7% (216/233)  IGHV3-21*01  64   ...........................AG.............................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  K  K  S  V  F  L 
                    Query_7811   103  AGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCAAGAAGTCAGTGTTTCTG  192
V  92.7% (216/233)  IGHV3-21*01  154  ...AG.AG..G..G.T....A........A.......................................G.......C...C...A....  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------------------CDR3-IMGT-------------
                                       Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  G  Y  P  L  D  G 
                    Query_7811   193  CAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGT  282
V  92.7% (216/233)  IGHV3-21*01  244  .......................G...........G.................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (15/15)   IGHD3-22*01  11   ---------------------------------------------------------------...............------------  25
J  100.0% (47/47)   IGHJ6*02     16   -------------------------------------------------------------------------------------.....  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7811   283  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  100.0% (47/47)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_158233

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     7e-98
IGHD6-19*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGCCCCCCGTACCGCA	TATAGCAGTGCCTG	CCTCG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGCCCCCCGTACCGCATATAGCAGTGCCTGCCTCGGACTAC	ARWPPVPHIAVPASDY	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	232	10	0	95.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  M  S  R  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_7812   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATGAGTAGGTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  95.9% (232/242)  IGHV4-59*01  50   .....TCC...A.........................C.....T..............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  M  N  
                    Query_7812   94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCATGAACC  183
V  95.9% (232/242)  IGHV4-59*01  140  ....................................................................................A.....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  K  R  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  W  P  P  V  P  H  I  A  V  
                    Query_7812   184  AGTTCTCCCTGAAGAGGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGATGGCCCCCCGTACCGCATATAGCAGTGC  273
V  95.9% (232/242)  IGHV4-59*01  230  ..............CT....................................C.........----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  92.9% (13/14)    IGHD6-19*01  4    -------------------------------------------------------------------------------..........G  14

                                      ------------->                                  
                                      P  A  S  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_7812   274  CTGCCTCGGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  321
D  92.9% (13/14)    IGHD6-19*01  15   ...---------------------------------------------  17
J  97.5% (39/40)    IGHJ4*02     9    --------............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_51395

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           420     7e-120
IGHD2-2*02                                                                                            10.3    141   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCTAAAACAGGCCCAGAA	ATACC	CGACCCCCG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGACCTCTAAAACAGGCCCAGAAATACCCGACCCCCGACTTCGGTATGGACGTC	SRPLKQAQKYPTPDFGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_7813   1    GCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAATTA  90
V  96.5% (279/289)  IGHV5-51*03  6    ........................G.............................................................GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  R  L  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_7813   91   CTGGATCGCCTGGGTGCGCCGGCTGCCCGGGAAAGGACTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.5% (279/289)  IGHV5-51*03  96   ........G...........A.A.............C.....................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  H  W  S  S  L  K  A  S  D  T  A
                    Query_7813   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGCACCGCCTACCTGCACTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.5% (279/289)  IGHV5-51*03  186  ...................................A........................G.............................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  S  R  P  L  K  Q  A  Q  K  Y  P  T  P  D  F  G  M  D  V  W  G  Q  G  T  A  V
                    Query_7813   271  CATGTATTACTGTTCGAGACCTCTAAAACAGGCCCAGAAATACCCGACCCCCGACTTCGGTATGGACGTCTGGGGCCAAGGGACCGCGGT  360
V  96.5% (279/289)  IGHV5-51*03  276  .............G.....-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD2-2*02   27   ---------------------------------------.....----------------------------------------------  31
J  96.0% (48/50)    IGHJ6*02     13   -----------------------------------------------------...A............................A....  49

                                                   
                                        T  V  S  S 
                    Query_7813   361  CACCGTCTCCTCA  373
J  96.0% (48/50)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_218342

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           410     1e-116
IGHD6-25*01                                                                                           12.2    35    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TT	AGCGGC	GAAGGTAACCTTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTAGCGGCGAAGGTAACCTTATTGACTAC	AKLSGEGNLIDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  R  Y
                    Query_7814   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCAGGTA  90
V  95.2% (276/290)  IGHV5-51*01  6    ..................................................................T....................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  D  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  Y  D  V  R  Y  R  P
                    Query_7814   91   CTGGATCGACTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTATGATGTGAGATACAGACC  180
V  95.2% (276/290)  IGHV5-51*01  96   ........G..............................................................C....ACC........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7814   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGCACCGCCTTTTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (276/290)  IGHV5-51*01  186  ...................................A.................ACC..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  K  L  S  G  E  G  N  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7814   271  CATTTATTACTGTGCGAAACTTAGCGGCGAAGGTAACCTTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.2% (276/290)  IGHV5-51*01  276  ...G.............G..---------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD6-25*01  10   ----------------------......-------------------------------------------------------  15
J  100.0% (42/42)   IGHJ4*02     7    -----------------------------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_78282

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           279     3e-77
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GTTCTCC	ATTGTAGGAGTTCCAG	TCCCGGATGAAA	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGTTCTCCATTGTAGGAGTTCCAGTCCCGGATGAAAACTCCTACGGAATGGAGGTC	AKEFSIVGVPVPDENSYGMEV	230	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	46	5	0	90.2
CDR2-IMGT	92	115	24	19	5	0	79.2
FR3-IMGT	116	229	114	104	10	0	91.2
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	201	23	0	89.7


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  T  T  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  S  V  T  G  T 
                    Query_7815   14   TCTGGATTCACCTTTACCACCCATGCCATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGGAGTGGGTCGCAAGCGTTACTGGTACT  103
V  89.7% (201/224)  IGHV3-23*01  73   ................G..G.T...............................G..................T..GCTA...G.....G.  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  G  S  T  Y  Y  A  D  S  A  K  G  R  F  T  I  S  R  D  N  P  K  N  I  L  F  L  Q  M  N 
                    Query_7815   104  GGAGGCAGCACATACTACGCAGACTCCGCGAAGGGCCGGTTCACCATCTCCAGAGACAACCCCAAGAACATCCTGTTTCTACAGATGAAC  193
V  89.7% (201/224)  IGHV3-23*01  163  ..T..T......................T..............................TT.........CG....A...G..A......  252
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><--------------------------CDR3-IMGT------------------
                                       S  P  R  A  E  D  T  A  V  Y  Y  C  A  K  E  F  S  I  V  G  V  P  V  P  D  E  N  S  Y  G 
                    Query_7815   194  AGCCCGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAAGAGTTCTCCATTGTAGGAGTTCCAGTCCCGGATGAAAACTCCTACGGA  283
V  89.7% (201/224)  IGHV3-23*01  253  ....T.....................A.................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  87.5% (14/16)    IGHD2-2*01   6    ---------------------------------------------------.......T...A....-----------------------  21
J  90.6% (48/53)    IGHJ6*02     10   -------------------------------------------------------------------------------...A......T  20

                                      -------->                                 
                                       M  E  V  W  G  Q  G  T  T  V  T  V  A  S 
                    Query_7815   284  ATGGAGGTCTGGGGCCAGGGGACCACGGTCACCGTCGCCTCA  325
J  90.6% (48/53)    IGHJ6*02     21   .....C...........A..................T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_303849

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD2-15*01                                                                                           12.2    31   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CCTAAGGATTG	GGTGGT	TCCTT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACCTAAGGATTGGGTGGTTCCTTACTTCTTTGACCAC	ARPKDWVVPYFFDH	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  N  T  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7816   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTCAATACTTACTACTGGACCTGGATCCGACAGCCCCCAGGGAAGGGACTGGAG  90
V  91.8% (223/243)  IGHV4-59*01  49   ....................................A...G..G...........G.........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  A  S  K  N 
                    Query_7816   91   TGGATTGGCTATGTCTATTCCAGTGGGAGCACTAACTACAACCCCTCCCTCAAGAGCCGAGTCACCATATCACTGGACGCGTCCAAGAAC  180
V  91.8% (223/243)  IGHV4-59*01  139  ........G...A......A............C.......................T...............G.A...A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  F  C  A  R  P  K  D  W  V  V  P  Y  F 
                    Query_7816   181  CAGTTCTCCCTGAAACTGACCTCTGTGACCGCTGCCGACACGGCCCTCTATTTCTGTGCGCGACCTAAGGATTGGGTGGTTCCTTACTTC  270
V  91.8% (223/243)  IGHV4-59*01  229  ..............G....G...............G.........G.G....A.......A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-15*01  14   --------------------------------------------------------------------------......----------  19
J  95.8% (46/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------...A.  5

                                      -------->                                  
                                       F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7816   271  TTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  95.8% (46/48)    IGHJ4*02     6    ......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_42155

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ5*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGTTTTGAGG	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGGCC	AGHLVTPGTRGFEA	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_7817  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01  49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_7817  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01  139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_7817  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01  229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01  13   ----------------------------------------------------------------------.....C..G...--------  24

                                     ----------->                                  
                                      G  F  E  A  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_7817  271  GGTTTTGAGGCCTGGGGCCAGGGAACTCTGATCACCGTCTCCTCAG  316
J  94.4% (34/36)    IGHJ5*02    16   ----------................C...G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_255029

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            338     5e-95
IGHD3-22*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TCG	TTACTTTGATGGAAATGGTTA	CTCCGTGCTGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATCGTTACTTTGATGGAAATGGTTACTCCGTGCTGAACTAC	ARDRYFDGNGYSVLNY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7818   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTTTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-7*03   47   ..............................................C.A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  Y  Q  D  G  T  G  Q  N  Y  V  A  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_7818   91   AGTGGGTGGCCAACATATACCAAGATGGAACTGGACAAAACTATGTGGCCTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  93.2% (233/250)  IGHV3-7*03   137  .................A.G..........G..AGA..T.........A......................A..................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  L  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  R  Y  F  D  G  N  
                    Query_7818   181  AGAACTTATTGTTTCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTGTACTACTGTGCGAGGGATCGTTACTTTGATGGAAATG  270
V  93.2% (233/250)  IGHV3-7*03   227  ......C.C...A.......................C..................T...........A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  81.0% (17/21)    IGHD3-22*01  4    -------------------------------------------------------------------------.....A....A.T.G..  20

                                      T------------------>                                  
                                      G  Y  S  V  L  N  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7818   271  GTTACTCCGTGCTGAACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  324
D  81.0% (17/21)    IGHD3-22*01  21   ....--------------------------------------------------  24
J  97.4% (38/39)    IGHJ4*02     10   ---------------...................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_255028

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCATC	ATTACTATGGTAATAGTGGTTATT	TCGTAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCATCATTACTATGGTAATAGTGGTTATTTCGTAGAC	ARGHHYYGNSGYFVD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  F  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_7819   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTTCTCCATCCGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCGGGGAAGGGC  90
V  96.8% (242/250)  IGHV4-31*03  49   ..............................GG.......A........................................A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  A  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7819   91   CTGGAGTGGATTGGGTACATCTATTATAGTGGGAGCGCCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  96.8% (242/250)  IGHV4-31*03  139  ..........................C.........A.....................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  H  Y  C  A  R  G  H  H  Y  Y  G  N 
                    Query_7819   181  AAGAACCAGTTCTCCCTGAAGCTGACCTCTGTGACTGCCGCGGACACGGCCGTGCATTACTGTGCGAGAGGGCATCATTACTATGGTAAT  270
V  96.8% (242/250)  IGHV4-31*03  229  .........................G............................T...............--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (22/24)    IGHD3-22*01  3    ----------------------------------------------------------------------------.........A..G.  16

                                      ----------------->                                  
                                       S  G  Y  F  V  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7819   271  AGTGGTTATTTCGTAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  91.7% (22/24)    IGHD3-22*01  17   ..........------------------------------------------  26
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_179258

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD1-26*01                                                                                           10.3    120  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TGCCCCATATACGCAAAAAACTA	GAGCT	TTTCGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGCCCCATATACGCAAAAAACTAGAGCTTTTCGCCTTGACTAC	ASAPYTQKTRAFRLDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	228	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  F  S  G  D  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7820   1    ACCCTGTCCCTCACCTGCACTTTCTCTGGTGACTCCATCAGTAACTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.2% (228/242)  IGHV4-59*01  49   .....................G.........G...........GT.............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_7820   91   TGGATTGGCTATATCTATTACAGTGGGAACACCAACTACAACCCCTCCCTCAAAAGTCGAGTCACCATTTCAGTAGACACGTCGAAGAAG  180
V  94.2% (228/242)  IGHV4-59*01  139  ........G...................G........................G..............A..............C.....C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  R  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  S  A  P  Y  T  Q  K  T  R  A 
                    Query_7820   181  CAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGTGCCCCATATACGCAAAAAACTAGAGCT  270
V  94.2% (228/242)  IGHV4-59*01  229  .............A......C..................A.......G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  11   -------------------------------------------------------------------------------------.....  15

                                      -------------->                                  
                                       F  R  L  D  Y  W  G  Q  G  S  L  V  T  V  S  A  
                    Query_7820   271  TTTCGCCTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCGCAG  319
J  95.2% (40/42)    IGHJ4*02     7    -------....................A.................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_255025

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           321     7e-90
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	CGTGCAGGGGTCGTTA	TACGATTTTTGGAGTGG	GTTCCTGGGA	CCCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACGTGCAGGGGTCGTTATACGATTTTTGGAGTGGGTTCCTGGGACCC	RTCRGRYTIFGVGSWDP	242	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	29	28	0	1	96.6
CDR1-IMGT	29	52	24	21	3	0	87.5
FR2-IMGT	53	103	51	50	1	0	98
CDR2-IMGT	104	127	24	20	4	0	83.3
FR3-IMGT	128	241	114	104	10	0	91.2
CDR3-IMGT (germline)	242	246	5	5	0	0	100
Total	N/A	N/A	247	228	18	1	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L   D  S  P  V  Q  P  L  D  T  P  L  E  V  M  P  *  A  G  S  A  R  L  Q  G  R  G  W 
                    Query_7821   1    GGTCCCTG-GACTCTCCTGTGCAGCCTCTGGATACACCTTTAGAAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  89
V  92.3% (228/247)  IGHV3-23*01  47   ........A........................T.........C..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       S  G  S  Q  L  L  V  V  V  E  V  T  Y  T  T  Q  T  P  *  R  A  G  S  P  S  P  E  T  T  P 
                    Query_7821   90   AGTGGGTCTCAGTTATTAGTGGTAGTGGAAGTAACATATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  179
V  92.3% (228/247)  IGHV3-23*01  137  ............C...............TG...G..C................................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                       G  I  P  C  I  F  K  *  I  P  *  E  P  R  T  R  P  Y  I  T  V  R  T  C  R  G  R  Y  T  I 
                    Query_7821   180  GGAATACCCTGTATCTTCAAATGAATACCCTGAGAGCCTAGGACTCGGCCATATATTACTGTGCGAACGTGCAGGGGTCGTTATACGATT  269
V  92.3% (228/247)  IGHV3-23*01  227  A...C..G........G........C.G..........G.....A.....G................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (17/17)   IGHD3-3*01   5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                       F  G  V  G  S  W  D  P  G  A  R  E  S  W  S  P  S  P  Q 
                    Query_7821   270  TTTGGAGTGGGTTCCTGGGACCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  326
D  100.0% (17/17)   IGHD3-3*01   12   ..........-----------------------------------------------  21
J  97.3% (36/37)    IGHJ5*02     15   --------------------................C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_255027

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	236	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	25	22	22	0	0	100
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	48	3	0	94.1
CDR2-IMGT	101	121	21	18	3	0	85.7
FR3-IMGT	122	235	114	104	10	0	91.2
CDR3-IMGT (germline)	236	243	8	8	0	0	100
Total	N/A	N/A	240	223	17	0	92.9


Alignments

                                      <------FR1-IMGT------><-------CDR1-IMGT------><--------------------FR2-IMGT---------------
                                        S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  A  L  E  W  I
                    Query_7822   4    GTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGCACTGGAGTGGAT  93
V  92.9% (223/240)  IGHV4-59*08  54   ......................................G......................................G............  143
                                        S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I

                                      ------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-
                                        G  S  I  F  Y  T  G  T  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F
                    Query_7822   94   CGGGTCTATCTTTTACACTGGGACCACCAACTACGACCCCTCTCTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGAACCAGTT  183
V  92.9% (223/240)  IGHV4-59*08  144  T....A.....A.....G.....G..........A.......C....................A.....A....................  233
                                        G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F

                                      ---------------------------------------------------><----------------CDR3-IMGT------------
                                        S  L  R  V  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  H  R  A  A  A  G  P  F  D
                    Query_7822   184  CTCCCTGAGAGTGACCTCTCTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGA  273
V  92.9% (223/240)  IGHV4-59*08  234  ........AGC...G....G......................G.................------------------------------  293
                                        S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                                 
D  100.0% (12/12)   IGHD6-13*01  7    ---------------------------------------------------------------------............---------  18
J  93.2% (41/44)    IGHJ4*02     5    ------------------------------------------------------------------------------------......  10

                                      --->                                  
                                        N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_7822   274  CAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  311
J  93.2% (41/44)    IGHJ4*02     11   .T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_255026

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           335     4e-94
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAC	TGAGGCCCAATC	ACTATGAAAGTAGTGGT	CTCTGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACTGAGGCCCAATCACTATGAAAGTAGTGGTCTCTGGCACTACTGTTTGGACGTC	ATLRPNHYESSGLWHYCLDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  A  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7823   1    ACCCTGTCCCTCACCTGCACTGCCTCTGGTGGCTCCATTAGTAGTTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.9% (229/244)  IGHV4-59*08  49   ......................T...............C........C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  T  H  Y  S  G  S  A  K  Y  N  P  S  L  K  S  R  V  T  I  S  E  D  T  S  K  N 
                    Query_7823   91   TGGATTGGGAATACCCATTACAGTGGGAGCGCCAAATACAATCCCTCCCTTAAGAGTCGAGTCACCATATCAGAGGACACGTCCAAGAAC  180
V  93.9% (229/244)  IGHV4-59*08  139  .........T...T.T..............A....C.....C........C......................TA...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  V  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  T  L  R  P  N  H  Y  E  S  S 
                    Query_7823   181  CAGGTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGACACTGAGGCCCAATCACTATGAAAGTAGT  270
V  93.9% (229/244)  IGHV4-59*08  229  ...T................................................A........G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD3-22*01  6    ----------------------------------------------------------------------------.......T......  19

                                      GT------------------------>                                 
                                       G  L  W  H  Y  C  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7823   271  GGTCTCTGGCACTACTGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
D  94.1% (16/17)    IGHD3-22*01  20   ...---------------------------------------------------------  22
J  96.0% (48/50)    IGHJ6*02     13   ----------.....G..A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_255021

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           336     1e-94
IGHD1-26*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GGG	GGGAGCTACT	CTCCTTTT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGGGGGGAGCTACTCTCCTTTTTGCTTTTGATATC	VKGGATLLFAFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  M  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7824   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAATATGTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTAG  90
V  93.5% (231/247)  IGHV3-64*05  47   ..........................................G..GC.........................................G.  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  V  S  S  I  T  S  N  A  E  S  T  Y  Y  T  D  S  V  K  D  R  F  T  I  S  R  D  N  S  
                    Query_7824   91   AATCTGTCTCCTCTATTACTAGTAATGCGGAGAGCACATACTACACAGACTCAGTGAAGGACAGATTCACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-64*05  137  ...A...T..AG......G........G..GT............G...............G.............................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  G  G  A  T  L  L  F  
                    Query_7824   181  AGAACACGCTGTATCTTCAAATGAGCAGTCTGAGACCTGAGGACACGGCTGTGTATTACTGTGTGAAGGGGGGAGCTACTCTCCTTTTTG  270
V  93.5% (231/247)  IGHV3-64*05  227  ..............G....................G...............................-----------------------  293
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V                          
D  100.0% (10/10)   IGHD1-26*01  9    ----------------------------------------------------------------------..........----------  18
J  97.9% (46/47)    IGHJ3*02     4    ----------------------------------------------------------------------------------------..  5

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_7824   271  CTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  315
J  97.9% (46/47)    IGHJ3*02     6    ..........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_255020

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           378     3e-107
IGHD1-26*01                                                                                           10.3    131   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTCAC	GTGGG	GTTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATTTCACGTGGGGTTTCTTTGACTAC	VRDFTWGFFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  F  E  M  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_7825   2    CAGCTGGTGCAGTCTGGATTTGAGATGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGCTACACCTTTACCACCTTT  91
V  91.7% (266/290)  IGHV1-18*01  7    ..................GC....G..............................................T.............G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       P  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  T  Y  N  H  N  T  K  Y  A  Q 
                    Query_7825   92   CCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACTTACAATCATAACACAAAGTATGCACAG  181
V  91.7% (266/290)  IGHV1-18*01  97   GG........................................................G.G........GG.........C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  L  T  M  T  T  D  T  S  T  E  T  A  Y  M  E  M  G  S  L  R  S  D  D  T  A 
                    Query_7825   182  AAGTTCCAGGGCAGACTCACCATGACCACAGACACATCCACGGAAACAGCCTACATGGAAATGGGGAGCCTGAGATCTGACGACACGGCC  271
V  91.7% (266/290)  IGHV1-18*01  187  ...C...........G..........................AGC..............GC..A..........................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       M  Y  Y  C  V  R  D  F  T  W  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7825   272  ATGTATTATTGTGTGAGAGATTTCACGTGGGGTTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  91.7% (266/290)  IGHV1-18*01  277  G.......C....C......-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  100.0% (44/44)   IGHJ4*02     5    -----------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_255023

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTTTG	ACTATGATAGTAGTGGT	ACTTACCACGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTTGACTATGATAGTAGTGGTACTTACCACGTTTTTGACTAC	ARFDYDSSGTYHVFDY	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	229	12	0	95


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_7826   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  95.0% (229/241)  IGHV4-59*01  50   .....TCC...A....C............................A............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  N  
                    Query_7826   94   GGATTGGATATATCTATTACAGTGGCAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCCAGGAACC  183
V  95.0% (229/241)  IGHV4-59*01  140  .......G.................G..C..........................................G............A.....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  D  Y  D  S  S  G  T  Y  
                    Query_7826   184  AGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTTTGACTATGATAGTAGTGGTACTTACC  273
V  95.0% (229/241)  IGHV4-59*01  230  ...................C.........................................-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (17/17)   IGHD3-22*01  6    ------------------------------------------------------------------.................-------  22

                                      ------------->                                  
                                      H  V  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7826   274  ACGTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (43/43)   IGHJ4*02     6    -----...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_255022

Length=413
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           386     2e-109
IGHD3-3*01                                                                                            46.8    1e-09 
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGAGCTTGAC	TTACGATTTTTGGAGTGGTTATTA	CCCGACC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGAGCTTGACTTACGATTTTTGGAGTGGTTATTACCCGACCACTACTACTACGCTATGGACGTC	ARGELDLRFLEWLLPDHYYYAMDV	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  T  H 
                    Query_7827   2    CAGCTGGTGCAATCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTTCCACTCAC  91
V  92.7% (268/289)  IGHV1-18*04  7    ...........G.....................................................................A...GCT..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  K  K  S  I  T  K  Y  A  Q 
                    Query_7827   92   GGTATTAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGCTAAGAAAAGTATCACAAAGTATGCACAG  181
V  92.7% (268/289)  IGHV1-18*04  97   .....C.............................G...........................T.C..TG...A......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  R  D  R  V  T  M  T  T  D  T  S  T  T  T  V  Y  M  E  L  R  S  L  R  S  D  D  A  A 
                    Query_7827   182  AAGTTCCGAGACAGAGTCACCATGACCACAGACACATCCACGACCACAGTCTACATGGAACTGAGGAGCCTGAGATCTGACGACGCGGCC  271
V  92.7% (268/289)  IGHV1-18*04  187  ...C...AG.G................................G.....C.........G........................A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------------CDR3-IMGT------------------------------>      
                                       V  Y  Y  C  A  R  G  E  L  D  L  R  F  L  E  W  L  L  P  D  H  Y  Y  Y  A  M  D  V  W  G 
                    Query_7827   272  GTGTATTACTGTGCGAGAGGGGAGCTTGACTTACGATTTTTGGAGTGGTTATTACCCGACCACTACTACTACGCTATGGACGTCTGGGGC  361
V  92.7% (268/289)  IGHV1-18*04  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (24/24)   IGHD3-3*01   4    ------------------------------........................------------------------------------  27
J  98.2% (55/56)    IGHJ6*02     7    -------------------------------------------------------------............G................  35

                                                                 
                                       Q  G  T  T  V  T  V  S  S 
                    Query_7827   362  CAAGGGACCACGGTCACCGTCTCCTCA  388
J  98.2% (55/56)    IGHJ6*02     36   ...........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40498920


Query= Query_34294

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           294     6e-82
IGHD3-3*01                                                                                            12.2    31   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAGTGG	CAAGTAGGG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGAGTGGCAAGTAGGGGGTTCGACCCC	VRGVASRGFDP	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	125	24	19	5	0	79.2
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	246	7	5	2	0	71.4
Total	N/A	N/A	232	210	22	0	90.5


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  F  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  A  R  I 
                    Query_7828   15   TGTGCAGCCTCTGGATTCACCTTCAGCAGCTACTTTATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGACTCGTGTGGGTCGCACGTATT  104
V  90.5% (210/232)  IGHV3-74*01  64   ..........................T.......GG................................G..G.........T........  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       R  S  D  G  T  T  T  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  V  K  S  T  L  Y  L 
                    Query_7828   105  CGGAGTGATGGGACTACCACAGCCTACGCGGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAACGTCAAGAGCACACTGTATCTG  194
V  90.5% (210/232)  IGHV3-74*01  154  AAT..........G..G....AG........................A......................C.....A...G.........  243
                                       N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------CDR3-IMGT----------->            
                                       E  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  V  R  G  V  A  S  R  G  F  D  P  W  G  Q  G 
                    Query_7828   195  GAAATGAACAGTCTGAGAGTCGAGGACACGGCTGTGTATTATTGTGTGAGAGGAGTGGCAAGTAGGGGGTTCGACCCCTGGGGCCAGGGA  284
V  90.5% (210/232)  IGHV3-74*01  244  C..................C.....................C....CA....--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (6/6)     IGHD3-3*01   16   ----------------------------------------------------......--------------------------------  21
J  97.8% (44/45)    IGHJ5*02     7    -------------------------------------------------------------------.......................  29

                                                            
                                       T  L  V  A  V  S  S  
                    Query_7828   285  ACCCTGGTCGCCGTCTCCTCAG  306
J  97.8% (44/45)    IGHJ5*02     30   .........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_34295

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            338     4e-95
IGHD3-3*01                                                                                            12.2    30   
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	A	TTGGAG	GCCGG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCATTGGAGGCCGGTGACTAC	ALEAGDY	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	230	14	0	94.3


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  P  F  S  N  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7829  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCTTTAGTAACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (230/244)  IGHV3-7*03  47   ...................................A.........G............................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  Y  V  K  Q  L  G  S  E  K  F  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_7829  91   AGTGGGTGGCCTACGTAAAACAACTTGGAAGTGAGAAATTTTATGTGGACTCTGTGAAGGGCCGATTCACCATTTCCAGAGACAACACCA  180
V  94.3% (230/244)  IGHV3-7*03  137  ...........A..A....G...GA..............AC................................C............G...  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  C  C  A  L  E  A  G  D  Y  W  G  
                    Query_7829  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCCTTGTATTGCTGTGCATTGGAGGCCGGTGACTACTGGGGCC  270
V  94.3% (230/244)  IGHV3-7*03  227  ........................................G.........G......A......--------------------------  290
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-3*01  13   -----------------------------------------------------------------......-------------------  18
J  100.0% (41/41)   IGHJ4*02    8    ----------------------------------------------------------------------------..............  21

                                                                
                                     Q  G  T  L  V  T  V  S  S  
                    Query_7829  271  AGGGAACCCTGGTCACCGTCTCCTCAG  297
J  100.0% (41/41)   IGHJ4*02    22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_179442

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           308     4e-86
IGHD3-10*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCCGCCGC	TTCGGGGAGTT	GACGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCCGCCGCTTCGGGGAGTTGACGCTTGACTAC	ARDGRRFGELTLDY	235	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	9	2	0	81.8
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	120	21	17	4	0	81
FR3-IMGT	121	234	114	108	6	0	94.7
CDR3-IMGT (germline)	235	242	8	8	0	0	100
Total	N/A	N/A	229	213	16	0	93


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  S  V  S  T  N  Y  M  S  W  F  R  Q  A  P  G  K  G  L  E  W  V  S  V  L  
                    Query_7830   14   GTGCAGTTTCTGGGTTCAGCGTCAGTACCAATTACATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTCTTT  103
V  93.0% (213/229)  IGHV3-53*01  65   ......CC..........C........G...C............G.........................................A...  154
                                         A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  

                                      --CDR2-IMGT-----><----------------------------------------------------FR3-IMGT------------
                                      Y  S  G  G  V  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  
                    Query_7830   104  ATAGTGGTGGTGTCACATTCTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACATTGTATCTTCAAA  193
V  93.0% (213/229)  IGHV3-53*01  155  ....C......AG.....A.........................................................GC............  244
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  

                                      ----------------------------------------><----------------CDR3-IMGT--------------->       
                                      M  N  I  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  R  R  F  G  E  L  T  L  D  Y  W  G  
                    Query_7830   194  TGAATATCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGAGATGGCCGCCGCTTCGGGGAGTTGACGCTTGACTACTGGGGCC  283
V  93.0% (213/229)  IGHV3-53*01  245  ....C.G..............................C...........-----------------------------------------  293
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                            
D  100.0% (11/11)   IGHD3-10*01  13   -----------------------------------------------------------...........--------------------  23
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------...............  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_7830   284  AGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (42/42)   IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_34290

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  H
                    Query_7831   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATCA  90
V  92.4% (268/290)  IGHV5-51*01  6    ....................C........A.....................G.........A......C.........C.......GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  P
                    Query_7831   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCCC  180
V  92.4% (268/290)  IGHV5-51*01  96   ...................................................G.......A.....G.......G....C.....C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  A
                    Query_7831   181  GTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCGC  270
V  92.4% (268/290)  IGHV5-51*01  186  ...............G........C...................................G.......G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_7831   271  CTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  350
V  92.4% (268/290)  IGHV5-51*01  276  .A.......C.....G....------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    -----------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_34291

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           357     1e-100
IGHD2-2*01                                                                                            18.0    0.68  
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CC	ATTGTAGTA	AGACCGATTGTCATTTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCATTGTAGTAAGACCGATTGTCATTTTTACTTCTACTATAGTATGGACGTC	ASHCSKTDCHFYFYYSMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	258	30	0	89.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  G  T  F  S  N  F
                    Query_7832   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAACTT  90
V  89.6% (258/288)  IGHV1-69*01  6    ..................G...............................A...................................G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  L  F  G  T  T  N  Y  A  Q
                    Query_7832   91   TGGTATCAGTTGGGTGCGCCAGGCCCCGGGACAAGGACTTGAGTGGATGGGAGGGATCATCCCTCTGTTCGGAACAACAAACTACGCACA  180
V  89.6% (258/288)  IGHV1-69*01  96   ..C......C........A........T........G...........................A.C..T..T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  S  I  T  A  D  E  S  R  D  A  A  Y  L  E  L  S  R  L  K  P  E  D  T  A
                    Query_7832   181  GAAGTTCCAGGGCAGAGTCTCGATTACCGCGGACGAATCCAGGGACGCGGCCTATTTGGAGCTGAGTAGGCTGAAACCGGAAGACACGGC  270
V  89.6% (258/288)  IGHV1-69*01  186  ...................A.....................C.AG.A.A.....CA..........C..C....G.T.T..G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        L  Y  Y  C  A  S  H  C  S  K  T  D  C  H  F  Y  F  Y  Y  S  M  D  V  W  G  Q  G  T  T  V
                    Query_7832   271  CTTGTATTATTGTGCGAGCCATTGTAGTAAGACCGATTGTCATTTTTACTTCTACTATAGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  89.6% (258/288)  IGHV1-69*01  276  .G.......C........------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  100.0% (9/9)     IGHD2-2*01   6    --------------------.........-------------------------------------------------------------  14
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------....A......CG...............................  49

                                                   
                                        T  V  S  S 
                    Query_7832   361  CACCGTCTCCTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_179446

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           291     6e-81
IGHD3-10*01                                                                                           19.9    0.16 
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTCA	TATTGTTCGGGGA	ATGATTGTGACGCGGGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTCATATTGTTCGGGGAATGATTGTGACGCGGGGCTGGTTCGACCCC	ARDPHIVRGMIVTRGWFDP	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  S  A  L  S  N  Y  N  L  I  W  V  R  Q  A  P  G  R  G  L  
                    Query_7833   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATCCGCCTTAAGCAATTATAACTTAATCTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  87.2% (218/250)  IGHV3-21*01  47   .................................T.A....C..T.GC....G.A.G.A.......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  T  S  S  S  T  F  Y  A  T  S  V  K  G  R  F  T  I  S  R  D  N  G  
                    Query_7833   91   AGTGGGTCTCATCCATTAGCGGGACCAGTAGTTCCACATTCTACGCAACTTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  87.2% (218/250)  IGHV3-21*01  137  ...................TA.T.GT.......A..T..A.......GAC.....................................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  H  L  Q  M  S  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  P  H  I  V  R  G  
                    Query_7833   181  AGAACTCCCTACATCTGCAAATGAGTAGCCTGCGAGTCGAGGACACGGCTGTCTATTATTGTGCGAGAGATCCTCATATTGTTCGGGGAA  270
V  87.2% (218/250)  IGHV3-21*01  227  .......A..GT............AC......A...C...............G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD3-10*01  8    ----------------------------------------------------------------------------...G.........-  20

                                      -IMGT----------------------->                                  
                                      M  I  V  T  R  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7833   271  TGATTGTGACGCGGGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
J  100.0% (47/47)   IGHJ5*02     5    ----------------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_46575

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           325     3e-91
IGHD3-22*01                                                                                           18.0    0.59 
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGAT	TCTACTGGTCG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATTCTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDSTGRDPFDI	235	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	18	21	4	4	0	0	100
CDR1-IMGT	22	45	24	21	3	0	87.5
FR2-IMGT	46	96	51	51	0	0	100
CDR2-IMGT	97	120	24	24	0	0	100
FR3-IMGT	121	234	114	109	5	0	95.6
CDR3-IMGT (germline)	235	241	7	7	0	0	100
Total	N/A	N/A	224	216	8	0	96.4


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_7834   18   GTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  107
V  96.4% (216/224)  IGHV3-33*01  72   ...................AG..A..................................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  S  T  L  Y  L  Q  M  N
                    Query_7834   108  TGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAGCACGTTGTATCTGCAAATGAA  197
V  96.4% (216/224)  IGHV3-33*01  162  .............................................................T......A....C................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------------------CDR3-IMGT---------------------
                                        S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  S  T  G  R  D  P  F  D  I
                    Query_7834   198  CAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATTCTACTGGTCGTGATCCTTTTGATAT  287
V  96.4% (216/224)  IGHV3-33*01  252  .......A...................G................----------------------------------------------  295
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (9/9)     IGHD3-22*01  5    -------------------------------------------------------.........--------------------------  13
J  94.0% (47/50)    IGHJ3*02     1    ---------------------------------------------------------------------------....G..........  15

                                      >                                  
                                        W  G  Q  G  T  I  L  T  V  S  S  
                    Query_7834   288  CTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  322
J  94.0% (47/50)    IGHJ3*02     16   ..................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_179449

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           361     5e-102
IGHD2-15*01                                                                                           14.1    9.8   
IGHJ6*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGGGCTGCATC	TTGTAGCGGT	TCCAATTGCTACGACTTAGG	CGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGCTGCATCTTGTAGCGGTTCCAATTGCTACGACTTAGGCGGAATGGACGTC	ARRAASCSGSNCYDLGGMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	260	29	0	90


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  L  G  S  G  Y  S  F  V  K  Y
                    Query_7835   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCTGGGTTCTGGATACAGCTTTGTCAAATA  90
V  90.0% (260/289)  IGHV5-51*03  6    ..............................A..............................AA...................AC..GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  T  P  G  K  G  L  E  W  M  G  T  I  Y  P  S  D  S  D  T  R  Y  S  P
                    Query_7835   91   TTGGATTGCTTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGGACCATCTATCCGTCTGACTCTGATACCCGATACAGCCC  180
V  90.0% (260/289)  IGHV5-51*03  96   C.....C.GC.............T.............................T.........TGG.............A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  L  S  P  A  F  L  Q  W  S  S  L  G  V  S  D  S  A
                    Query_7835   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTCTCTCCCCCGCCTTCCTGCAGTGGAGCAGCCTGGGGGTCTCGGACAGCGC  270
V  90.0% (260/289)  IGHV5-51*03  186  .............................C.........CA..AG.A......A...................AA..C........C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        I  Y  Y  C  A  R  R  A  A  S  C  S  G  S  N  C  Y  D  L  G  G  M  D  V  W  G  R  G  T  T
                    Query_7835   271  CATTTATTACTGTGCGAGACGGGCTGCATCTTGTAGCGGTTCCAATTGCTACGACTTAGGCGGAATGGACGTCTGGGGCCGAGGGACCAC  360
V  90.0% (260/289)  IGHV5-51*03  276  ...G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  90.0% (9/10)     IGHD2-15*01  7    ------------------------------......T...--------------------------------------------------  16
J  93.5% (43/46)    IGHJ6*02     17   ------------------------------------------------------------...T................A.........  46

                                                      
                                        V  I  V  S  S 
                    Query_7835   361  GGTCATCGTCTCCTCA  376
J  93.5% (43/46)    IGHJ6*02     47   .....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_42151

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           344     6e-97
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	26	25	24	1	0	96
CDR1-IMGT	27	56	30	28	2	0	93.3
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	3	2	0	60
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <-------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT------
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G  L
                    Query_7836   2    CCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGGCT  91
V  94.7% (233/246)  IGHV4-39*01  51   .....................C.....................AG..............G..............................  140
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L

                                      ---------------><-----CDR2-IMGT-----><----------------------------------------------------
                                        E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S  K
                    Query_7836   92   GGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCCAA  181
V  94.7% (233/246)  IGHV4-39*01  141  ...................T..........................C.........A..................C..............  230
                                        E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K

                                      FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->        
                                        N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G  R
                    Query_7836   182  GAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGCCG  271
V  94.7% (233/246)  IGHV4-39*01  231  ................A.......C................................C...G.G..------------------------  296
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                           
D  100.0% (7/7)     IGHD1-1*01   9    ------------------------------------------------------------------.......-----------------  15
J  97.4% (37/38)    IGHJ4*02     10   -----------------------------------------------------------------------------............A  22

                                                               
                                        G  T  L  V  T  V  S  S 
                    Query_7836   272  GGGAACCCTGGTCACCGTCTCCTCA  296
J  97.4% (37/38)    IGHJ4*02     23   .........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_34298

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           402     3e-114
IGHD2-2*02                                                                                            10.3    137   
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGT	CTATA	TCGACTTTCATT	TACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCTATATCGACTTTCATTTACCACTACGGTATGGACGTC	ARGSISTFIYHYGMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  T  A  S  G  Y  T  F  K  N  Y 
                    Query_7837   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCACGGCTTCTGGTTACACCTTTAAGAACTAT  91
V  94.5% (273/289)  IGHV1-18*01  7    .............................................................A....................CC.G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  M  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  T  A  Y  N  G  K  R  D  Y  S  Q 
                    Query_7837   92   GGTATCATGTGGGTGCGACAGGCCCCTGGACAAGGGCTGGAGTGGATGGGCTGGATCACCGCTTACAATGGTAAAAGAGACTATTCACAG  181
V  94.5% (273/289)  IGHV1-18*01  97   .......GC.............................T...........A.......G...............C.C.A.....G.....  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_7837   182  AAACTCCAGGGCAGAGTCACCATGACCACGGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.5% (273/289)  IGHV1-18*01  187  ..G..........................A............................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  G  S  I  S  T  F  I  Y  H  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_7837   272  GTCTATTACTGTGCGAGAGGGTCTATATCGACTTTCATTTACCACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  361
V  94.5% (273/289)  IGHV1-18*01  277  ..G................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (5/5)     IGHD2-2*02   25   ----------------------.....---------------------------------------------------------------  29
J  98.1% (53/54)    IGHJ6*02     9    ---------------------------------------...T...............................................  59

                                         
                                       S 
                    Query_7837   362  TCA  364
J  98.1% (53/54)    IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_34299

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           305     3e-85
IGHD3-22*01                                                                                           18.0    0.61 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGAAA	TATGACTATGAT	CTTGGAGACGTGGGTCTCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGAAATATGACTATGATCTTGGAGACGTGGGTCTCCACAACTTTGACTCC	ARAPKYDYDLGDVGLHNFDS	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	219	24	0	90.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  M  S  N  Y  F  W  S  W  I  R  Q  P  P  G  K  R  L  E  
                    Query_7838   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATGAGTAATTACTTCTGGAGCTGGATTCGGCAGCCCCCAGGGAAGAGACTGGAGT  93
V  90.1% (219/243)  IGHV4-59*01  50   .....TCC...A....C....................C....G.....A............C..................G.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  L  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  I  D  T  P  K  N  
                    Query_7838   94   GGATTGGGTATATCTATTATAGTGGACTCACCAAGTACAACCCGTCCCTCAAGAGTCGAGTCAGCATATCAATTGACACGCCCAAGAACC  183
V  90.1% (219/243)  IGHV4-59*01  140  ...................C.....GAG......C........C...................C.......G.A......T.........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      H  F  S  L  K  V  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  A  P  K  Y  D  Y  D  L  G  
                    Query_7838   184  ACTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCATTTATTACTGTGCGAGAGCCCCGAAATATGACTATGATCTTGGAG  273
V  90.1% (219/243)  IGHV4-59*01  230  .G............C.............................G.G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  91.7% (11/12)    IGHD3-22*01  2    -----------------------------------------------------------------------...T........-------  13

                                      T------------------------>                                  
                                      D  V  G  L  H  N  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7838   274  ACGTGGGTCTCCACAACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
J  97.8% (44/45)    IGHJ4*02     4    ---------------.........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_101731

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           374     8e-106
IGHD2-15*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGGACGCCC	GGATATTGTCGTGGTGGAAGGTGCT	CGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCGGACGCCCGGATATTGTCGTGGTGGAAGGTGCTCGGGCTACTGCTACGGTTTGGACGTC	ARERTPGYCRGGRCSGYCYGLDV	244	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	245	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_7839   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (245/251)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S 
                    Query_7839   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  97.6% (245/251)  IGHV4-31*03  139  ..........................................................A.......G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       E  N  Q  F  S  L  K  L  S  S  V  T  A  A  G  T  A  I  Y  Y  C  A  R  E  R  T  P  G  Y  C 
                    Query_7839   181  GAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGGCACGGCCATCTATTACTGTGCGAGAGAGCGGACGCCCGGATATTGT  270
V  97.6% (245/251)  IGHV4-31*03  229  A..........................................A.......G.G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.0% (22/25)    IGHD2-15*01  2    ---------------------------------------------------------------------------------.........  10

                                      ---CDR3-IMGT----------------------------->                              
                                       R  G  G  R  C  S  G  Y  C  Y  G  L  D  V  W  G  Q  G  A  T  V  T  V  S 
                    Query_7839   271  CGTGGTGGAAGGTGCTCGGGCTACTGCTACGGTTTGGACGTCTGGGGCCAAGGGGCCACGGTCACCGTCTCC  342
D  88.0% (22/25)    IGHD2-15*01  11   A.......T..C....--------------------------------------------------------  26
J  94.2% (49/52)    IGHJ6*02     8    --------------------.....A.......A....................A.................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_121202

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           358     4e-101
IGHD2-15*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAGTCTGGACC	TGGTGGTA	ACATC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGAGTCTGGACCTGGTGGTAACATCGACTAC	ARHESGPGGNIDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	240	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  S  S  S  Y  Y  W  G  W  V  R  Q  P  P  G  K  G 
                    Query_7840   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGCAGTAGTTCTTACTACTGGGGCTGGGTCCGCCAGCCCCCAGGGAAGGGG  90
V  95.6% (240/251)  IGHV4-39*01  49   ...............................G................AG................A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  K  S  S  L  K  S  R  V  T  I  S  V  D  T  A 
                    Query_7840   91   CTGGAGTGGATTGGCAGTATCTATTATAGTGGGAGCACCTACTACAAGTCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGGCC  180
V  95.6% (240/251)  IGHV4-39*01  139  ..............G................................CC......................................T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  E  S  G  P  G  G 
                    Query_7840   181  AAGAACCAGTTCTCCCTGAAGGTGAGTTCTGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACATGAGTCTGGACCTGGTGGT  270
V  95.6% (240/251)  IGHV4-39*01  229  .....................C....C..........................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD2-15*01  13   -----------------------------------------------------------------------------------.......  19

                                      ----------->                                  
                                       N  I  D  Y  W  G  Q  G  T  P  V  T  I  S  S  
                    Query_7840   271  AACATCGACTACTGGGGCCAGGGAACCCCGGTCACCATCTCCTCAG  316
D  100.0% (8/8)     IGHD2-15*01  20   .---------------------------------------------  20
J  95.0% (38/40)    IGHJ4*02     9    ------......................T.......G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_121201

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD3-3*01                                                                                            41.1    7e-08 
IGHJ2*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATTGGC	GTATTACGATTTTCGGAGTGGTTA	CCCCTCGG	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATTGGCGTATTACGATTTTCGGAGTGGTTACCCCTCGGGGTACTTCGATCTC	ARGLAYYDFRSGYPSGYFDL	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  W  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_7841   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTGGTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ..............................G.C..................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  T 
                    Query_7841   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGACT  180
V  97.6% (244/250)  IGHV4-31*03  139  .......................................................................................T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  H  C  A  R  G  L  A  Y  Y  D  F 
                    Query_7841   181  AAGAACCAGTTCTCCCTGAAGCTGAGTTCTGTGACTGCCGCGGACACGGCCGTGTATCACTGTGCGAGAGGATTGGCGTATTACGATTTT  270
V  97.6% (244/250)  IGHV4-31*03  229  ..........................C..............................T............--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.8% (23/24)    IGHD3-3*01   1    -----------------------------------------------------------------------------.............  13

                                      DR3-IMGT------------------------>                                  
                                       R  S  G  Y  P  S  G  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_7841   271  CGGAGTGGTTACCCCTCGGGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  337
D  95.8% (23/24)    IGHD3-3*01   14   T..........--------------------------------------------------------  24
J  100.0% (48/48)   IGHJ2*01     6    -------------------................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_46577

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           319     2e-89
IGHD2-15*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCAGGGACAG	TGTATTGGTGGTAGGTGCTAC	CCTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGAGCAGGGACAGTGTATTGGTGGTAGGTGCTACCCTGCCTACTTTGACTAC	AREQGQCIGGRCYPAYFDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  T  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7842   1    GGTCCCTGAGACTCTCCTGTGTCGCGTCTGGGTTCACCTTCAGTACCTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-33*01  47   .....................CA........A.............G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  S  D  G  G  N  K  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_7842   91   AGTGGGTGGCGCTTATTTGGTCTGATGGAGGTAACAAATATTACTCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCA  180
V  90.8% (227/250)  IGHV3-33*01  137  ..........AG....A....A.......A....T.....C..TG.......................................A.....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  S  L  Q  L  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  Q  G  Q  C  I  G  
                    Query_7842   181  AGAATACGCTGTCTCTCCAATTGAACAGCCTGCGAGCCGACGACACGGCTGTTTATTACTGTGCGCGAGAGCAGGGACAGTGTATTGGTG  270
V  90.8% (227/250)  IGHV3-33*01  227  ....C.......A...G...A...........A.......G...........G............A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD2-15*01  8    --------------------------------------------------------------------------------....G.....  17

                                      -IMGT----------------------->                                  
                                      G  R  C  Y  P  A  Y  F  D  Y  W  G  K  G  T  L  V  S  V  S  S  
                    Query_7842   271  GTAGGTGCTACCCTGCCTACTTTGACTACTGGGGCAAGGGAACCCTGGTCTCCGTCTCCTCAG  333
D  90.5% (19/21)    IGHD2-15*01  18   ....C......----------------------------------------------------  28
J  95.7% (45/47)    IGHJ4*02     2    ----------------...................C..............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_121207

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           375     3e-106
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGTCGTATTCTTT	TGATAGTAGTGGT	CAGAGTCCCGCG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGTCGTATTCTTTTGATAGTAGTGGTCAGAGTCCCGCGTACTTTGACTAC	ARDLSYSFDSSGQSPAYFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7843   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (245/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  C  I  S  G  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  C  T  I  S  R  D  N  A  
                    Query_7843   91   AGTGGGTCTCATGCATCAGTGGTGGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATGCACCATCTCCAGAGACAACGCCA  180
V  98.0% (245/250)  IGHV3-21*01  137  ............C...T...A..A..........................................T.......................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  S  Y  S  F  D  
                    Query_7843   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGTCGTATTCTTTTGATA  270
V  98.0% (245/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD3-22*01  10   -------------------------------------------------------------------------------------.....  14

                                      R3-IMGT------------------------>                                  
                                      S  S  G  Q  S  P  A  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_7843   271  GTAGTGGTCAGAGTCCCGCGTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  336
D  100.0% (13/13)   IGHD3-22*01  15   ........----------------------------------------------------------  22
J  97.8% (45/46)    IGHJ4*02     3    --------------------........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_121206

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           316     2e-88
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAGGAGAGG	TTTTGGAGTGGTTATTATACC	GTTCATCGCCGACAGGCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGGAGAGGTTTTGGAGTGGTTATTATACCGTTCATCGCCGACAGGCGACTACTATTACGGTATAGACGTC	ARDLGEVLEWLLYRSSPTGDYYYGIDV	230	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	20	4	0	83.3
FR3-IMGT	116	229	114	110	4	0	96.5
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	213	11	0	95.1


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  T  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  G 
                    Query_7844   14   TCTGGATTCACCTTCAGTACCTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCTTCCATTAGTAGTGGG  103
V  95.1% (213/224)  IGHV3-21*01  73   ...................G.....G................................................A............A.T  162
                                       S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       S  I  Y  T  Y  Y  A  D  S  V  N  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 
                    Query_7844   104  AGTATTTACACATACTACGCAGACTCAGTGAACGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTCTATCTGCAAATGAAC  193
V  95.1% (213/224)  IGHV3-21*01  163  ....G.....T.....................G.........................................G...............  252
                                       S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><-----------------------------------CDR3-IMGT---------
                                       S  L  R  G  E  D  T  A  V  Y  F  C  A  R  D  L  G  E  V  L  E  W  L  L  Y  R  S  S  P  T 
                    Query_7844   194  AGCCTGAGAGGCGAGGACACGGCTGTGTATTTCTGTGCGAGAGATTTAGGAGAGGTTTTGGAGTGGTTATTATACCGTTCATCGCCGACA  283
V  95.1% (213/224)  IGHV3-21*01  253  ..........C....................A............----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  100.0% (21/21)   IGHD3-3*01   11   -------------------------------------------------------.....................--------------  31

                                      -------------------------->                                 
                                       G  D  Y  Y  Y  G  I  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7844   284  GGCGACTACTATTACGGTATAGACGTCTGGGGCCAAGGGACCACAGTCACCGTCTCCTCA  343
J  94.6% (53/56)    IGHJ6*02     7    ----.......C........G.......................G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_121205

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           360     1e-101
IGHD1-26*01                                                                                           21.8    0.044 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GA	GGTGTAGTGGGAGC	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTAT	ARGGVVGAPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	260	30	0	89.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  Q  P  G  S  S  V  K  V  S  C  K  S  S  G  G  S  F  S  S  Y
                    Query_7845   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGCAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGAGTTCTGGAGGTAGTTTCAGCAGCTA  90
V  89.7% (260/290)  IGHV1-69*01  6    ..................G............A................................GC.........C.CC...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  M  P  L  F  G  M  P  T  Y  A  G
                    Query_7845   91   TGCTGTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGTATCATGCCTCTGTTTGGCATGCCAACGTACGCAGG  180
V  89.7% (260/290)  IGHV1-69*01  96   ....A...............................................G.G.....C...A.C.....T.CAG...AC......CA  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  L  Q  G  R  V  T  I  T  A  D  A  S  T  R  T  A  Y  M  E  L  S  S  L  R  S  G  D  T  A
                    Query_7845   181  GAAGTTGCAGGGCAGAGTCACAATAACCGCGGACGCATCCACGAGGACAGCCTACATGGAGTTGAGCAGCCTGAGATCTGGGGACACGGC  270
V  89.7% (260/290)  IGHV1-69*01  186  ......C..............G..T..........A.........C...............C..................A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  V  V  G  A  P  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_7845   271  CATTTATTACTGTGCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTATTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  353
V  89.7% (260/290)  IGHV1-69*01  276  .G.G................---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  92.9% (13/14)    IGHD1-26*01  1    ----------------------...A..........-----------------------------------------------  14
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------------.........C............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_121204

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            302     3e-84
IGHD6-19*01                                                                                           21.8    0.039
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGTG	GCAGTGGCTGG	ATA	ATGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGTGGCAGTGGCTGGATAATGGCCGTC	AGGSGWIMAV	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	219	26	0	89.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  S  T  F  R  N  L  W  M  S  W  V  R  Q  I  P  G  K  G  L  
                    Query_7846   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATCCACATTTAGAAACCTTTGGATGAGTTGGGTCCGCCAGATCCCAGGGAAGGGTCTGG  90
V  89.4% (219/245)  IGHV3-7*03   47   .................................T...C.....T.G.TA.........C............GCT...........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  M  A  D  I  N  E  D  G  S  E  I  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7846   91   AGTGGATGGCCGACATAAACGAAGATGGAAGTGAGATAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  89.4% (219/245)  IGHV3-7*03   137  .....G.....A.......GC...............A.T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  V  D  L  Q  M  N  S  L  G  V  E  D  S  A  V  Y  Y  C  A  G  G  S  G  W  I  M  A  
                    Query_7846   181  AAAATTCAGTGGATCTGCAGATGAACAGCCTGGGAGTCGAGGACTCGGCCGTGTATTATTGTGCGGGTGGCAGTGGCTGGATAATGGCCG  270
V  89.4% (219/245)  IGHV3-7*03   227  .G..C...C..T.......A............A...C.......A.............C......-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD6-19*01  8    ---------------------------------------------------------------------...........----------  18
J  95.2% (40/42)    IGHJ6*02     21   -----------------------------------------------------------------------------------....A..  27

                                      ->                                 
                                      V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_7846   271  TCTGGGGCCAAGGGGCCACGGTCACCGTCTCCTCA  305
J  95.2% (40/42)    IGHJ6*02     28   ..............A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_101739

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            341     5e-96
IGHD2-2*01                                                                                            16.1    2.2  
IGHJ5*01                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGG	GTAGTAGT	TCGTCGATTTGGTC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGTAGTAGTTCGTCGATTTGGTCCTGGTTCGACTTT	AKGSSSSIWSWFDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	56	27	27	0	0	100
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                     <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                        S  L  R  L  S  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_7847  1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  94.3% (232/246)  IGHV4-4*01  47   ..A.....TCC...A...........................................................................  136
                                        T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                     ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                     L  E  W  I  G  K  I  Y  H  S  G  N  T  N  Y  N  P  S  L  E  S  R  A  T  V  S  V  D  K  S  
                    Query_7847  91   TGGAGTGGATTGGAAAAATCTATCATAGTGGGAACACCAACTACAACCCGTCCCTCGAGAGTCGAGCCACCGTATCAGTAGACAAGTCCA  180
V  94.3% (232/246)  IGHV4-4*01  137  .............GG..................G......................A.........T....A..................  226
                                     L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                     -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                     K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  G  S  S  S  S  I  W  
                    Query_7847  181  AGAACCAGTTCTCCCTGAAACTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAAGGGTAGTAGTTCGTCGATTTGGT  270
V  94.3% (232/246)  IGHV4-4*01  227  ...................G.....C...............................G........------------------------  292
                                     K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                          
D  100.0% (8/8)     IGHD2-2*01  9    ---------------------------------------------------------------------........-------------  16

                                     ------------->                                  
                                     S  W  F  D  F  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_7847  271  CCTGGTTCGACTTTTGGGGCCAGGGAATCCTGGTCACTGTCTCCTCAG  318
J  89.4% (42/47)    IGHJ5*01    5    -...........CC........A....C.........C..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_101738

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         338     5e-95
IGHD5-12*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD5-12*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	CGGTAAAGA	TGGCGACAATTAC	TTTTCCTCATTG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGACGGTAAAGATGGCGACAATTACTTTTCCTCATTGGACTCC	RQTVKMATITFPHWTP	242	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	29	27	1	1	93.1
CDR1-IMGT	29	52	24	21	3	0	87.5
FR2-IMGT	53	103	51	50	1	0	98
CDR2-IMGT	104	127	24	20	4	0	83.3
FR3-IMGT	128	241	114	110	4	0	96.5
CDR3-IMGT (germline)	242	249	8	7	1	0	87.5
Total	N/A	N/A	250	235	14	1	94


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L   D  S  P  V  *  P  L  E  S  P  S  V  P  I  L  C  T  G  S  A  R  L  Q  A  R  G  W 
                    Query_7848     1    GGTCCCTG-GACTCTCCTGTGTAGCCTCTGGAATCACCTTCAGTACCTATTCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  89
V  94.0% (235/250)  IGHV3-30-3*01  47   ........A............C..........T............G....G.......................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                         S  G  W  Q  I  Y  H  L  M  E  A  R  S  T  S  Q  T  P  *  R  A  D  S  P  S  P  E  T  I  P 
                    Query_7848     90   AGTGGGTGGCAGATATATCATTTGATGGAGGCAAGAAGCACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  179
V  94.0% (235/250)  IGHV3-30-3*01  137  ............T........A.......A....T..AT...A...............................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                         R  T  R  C  I  C  K  *  T  A  *  E  L  R  T  R  L  F  I  T  V  R  Q  T  V  K  M  A  T  I 
                    Query_7848     180  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTTGAGGACACGGCTGTTTATTACTGTGCGACAGACGGTAAAGATGGCGACAATT  269
V  94.0% (235/250)  IGHV3-30-3*01  227  ....................................C...............G.............G...--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.6% (11/13)    IGHD5-12*01    11   -------------------------------------------------------------------------------....T..G...  21

                                        T------------------>                                  
                                         T  F  P  H  W  T  P  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_7848     270  ACTTTTCCTCATTGGACTCCTGGGGCCAGGGAACCCTGGTCACCTTCTCCTCAG  323
D  84.6% (11/13)    IGHD5-12*01    22   ..----------------------------------------------------  23
J  95.0% (38/40)    IGHJ4*02       9    --------------....A.........................G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_121208

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           252     3e-69
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGC	AACC	TCGGGGAG	GACTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACCTCGGGGAGGACTCCCTACTACTATTACGGAATGGACGTC	ATSGRTPYYYYGMDV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	23	4	0	85.2
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	12	9	0	57.1
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	239	2	2	0	0	100
Total	N/A	N/A	239	200	39	0	83.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  M  S  G  G  S  F  N  G  Y  S  W  T  W  V  R  Q  R  P  G  K  G  L  E 
                    Query_7849   1    ACCCTGTCCCTCACCTGCGCGATGTCTGGTGGGTCCTTCAATGGATATTCTTGGACCTGGGTCCGCCAGCGCCCCGGGAAGGGACTGGAG  90
V  83.7% (200/239)  IGHV4-34*01  49   ....................TG.C.A..............G...T..C.AC....G....A.........C...A........G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  S  H  F  K  T  V  N  Y  N  P  T  L  L  G  R  V  N  I  S  I  D  T  S  K  N 
                    Query_7849   91   TGGATTGCGGAAATCAGTCATTTTAAAACCGTTAATTACAACCCGACACTCTTGGGTCGAGTCAACATATCGATAGACACCTCCAAGAAC  180
V  83.7% (200/239)  IGHV4-34*01  139  .......G........A....AG.GG..G.ACC..C.........T.C...AA.A.........C......AG.......G.........  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  S  G  R  T  P  Y  Y  Y  Y 
                    Query_7849   181  CACTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGCGCAACCTCGGGGAGGACTCCCTACTACTATTAC  270
V  83.7% (200/239)  IGHV4-34*01  229  ..G..........A.....G...........................G........T..-------------------------------  287
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (8/8)     IGHD3-10*01  14   ---------------------------------------------------------------........-------------------  21
J  96.6% (56/58)    IGHJ6*02     5    -----------------------------------------------------------------------------.........C...  17

                                      ----------->                                 
                                       G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7849   271  GGAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  315
J  96.6% (56/58)    IGHJ6*02     18   ..T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_31515

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     3e-90
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	242	26	6	88.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_7850   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.3% (242/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_7850   91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.3% (242/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_7850   181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.3% (242/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_7850   271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.3% (242/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_51397

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           315     5e-88
IGHD3-10*01                                                                                           23.8    0.010
IGHJ4*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-10*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	TGG	TCGGGGAGTTAT	C	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGTGGTCGGGGAGTTATCGACTAC	ASGRGVIDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	224	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  K  T  H  G  M  V  W  V  R  Q  A  P  G  K  G  L  
                    Query_7851   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAAAACCCATGGCATGGTCTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.7% (224/247)  IGHV3-30*03  47   ..........................................GT.G.T........CA................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  L  Y  D  G  S  N  Q  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7851   91   AGTGGGTGGCAGCAATTTTATATGATGGAAGTAATCAACACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  90.7% (224/247)  IGHV3-30*03  137  ............TT..A.C................A..T...................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      N  N  T  L  L  L  Q  M  N  S  L  R  T  D  D  T  G  L  Y  Y  C  A  S  G  R  G  V  I  D  Y  
                    Query_7851   181  ACAACACCCTGCTTCTGCAAATGAACAGCCTGAGAACTGACGACACGGGATTATATTACTGTGCAAGTGGTCGGGGAGTTATCGACTACT  270
V  90.7% (224/247)  IGHV3-30*03  227  .G.....G...TA......................G....G.......CTG.G...........G..-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (12/12)   IGHD3-10*01  14   ----------------------------------------------------------------------............--------  25
J  97.5% (39/40)    IGHJ4*01     9    -----------------------------------------------------------------------------------.......  15

                                                                       
                                      W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7851   271  GGGGCCAAGGAACCATGGTCACCGTCTCCTCAG  303
J  97.5% (39/40)    IGHJ4*01     16   ..............C..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_282293

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            372     2e-105
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AGGAGACTTCTAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAAGGAGACTTCTATTACTACTACTACCCTTTGGACGTC	AREGDFYYYYYPLDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7852  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  97.6% (244/250)  IGHV3-9*01  47   ..........................................................................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  I  S  W  N  S  D  T  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7852  91   AGTGGGTCTCAGGTATTAGTTGGAACAGTGATACCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (244/250)  IGHV3-9*01  137  .........................T....G..G........................................................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  R  E  G  D  F  Y  Y  Y  
                    Query_7852  181  AGAACTCCCTGTATCTGCAAATGAATAGTCTGAGACCTGAGGACACGGCCTTGTATTACTGTGCAAGAGAAGGAGACTTCTATTACTACT  270
V  97.6% (244/250)  IGHV3-9*01  227  .........................C.........G..............................A...--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
J  94.7% (54/57)    IGHJ6*02    6    -----------------------------------------------------------------------------------.......  12

                                     ---------------->                                 
                                     Y  Y  P  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7852  271  ACTACCCTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  94.7% (54/57)    IGHJ6*02    13   .....GG.A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_282290

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           343     2e-96
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCCAA	GTATAGAAGTGGC	ACCTACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCCAAGTATAGAAGTGGCACCTACTTTTGACTAT	AREPSIEVAPTFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  T  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  R  R 
                    Query_7853   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTACTGGTGGCTACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAGGAGA  90
V  93.6% (235/251)  IGHV4-61*08  49   .........................................C.G......T...........C.................A....A.G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  T  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 
                    Query_7853   91   CTGGAGTGGATTGGCTATATCTATTACACTGGGAGTACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACAAGTCG  180
V  93.6% (235/251)  IGHV4-61*08  139  ..............G.............G......C...A........................................A....C...C  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  P  S  I  E  V  A 
                    Query_7853   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGAGCCAAGTATAGAAGTGGCA  270
V  93.6% (235/251)  IGHV4-61*08  229  ...................A.......................................C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD6-19*01  3    ----------------------------------------------------------------------------......C......-  15

                                      -------------->                                  
                                       P  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7853   271  CCTACTTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  97.7% (42/43)    IGHJ4*02     6    ------........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_282291

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           280     1e-77
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	CCTGTCCCGCGTTATGG	TTTTTGGAATGGTTATT	CCAAAATCTAACTCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCCTGTCCCGCGTTATGGTTTTTGGAATGGTTATTCCAAAATCTAACTCTTTCGACACC	ARGLSRVMVFGMVIPKSNSFDT	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	212	33	0	86.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  L  D  G  H  Y  W  T  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_7854   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGGTCGCTCGATGGTCACTACTGGACCTGGATACGCCAGGCCCCAGGGAAGGGTCTGGAG  90
V  86.5% (212/245)  IGHV4-34*01  49   ..................G......A.........CT..AG....T.........G......C......C.............G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  T  G  D  T  N  Y  N  S  S  L  K  S  R  V  G  L  S  V  D  T  S  R  N 
                    Query_7854   91   TGGATTGGGGAGATTTCTCATACTGGAGACACCAACTACAACTCGTCCCTCAAGAGTCGAGTCGGCTTGTCAGTTGACACGTCCAGGAAC  180
V  86.5% (212/245)  IGHV4-34*01  139  ...........A..CAA.....G....AG.............C....................AC.A.A.....A..........A....  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  T  S  L  T  G  A  D  T  G  V  Y  Y  C  A  R  G  L  S  R  V  M  V  F  G 
                    Query_7854   181  CAGTTCTCCCTGAAGTTGACCTCCCTGACCGGCGCGGACACGGGTGTCTATTACTGTGCGCGAGGCCTGTCCCGCGTTATGGTTTTTGGA  270
V  86.5% (212/245)  IGHV4-34*01  229  ...............C...G...TG......C...........C...G............A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  94.1% (16/17)    IGHD3-3*01   10   ----------------------------------------------------------------------------------........  17

                                      -IMGT--------------------------->                                  
                                       M  V  I  P  K  S  N  S  F  D  T  W  G  P  G  V  L  V  T  V  S  S  
                    Query_7854   271  ATGGTTATTCCAAAATCTAACTCTTTCGACACCTGGGGCCCGGGAGTCCTGGTTACCGTCTCCTCAG  337
D  94.1% (16/17)    IGHD3-3*01   18   G........----------------------------------------------------------  26
J  88.4% (38/43)    IGHJ5*02     9    ------------------------......C.........A....AC......C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_282296

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           325     3e-91
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7855   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGACTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.0% (225/242)  IGHV3-33*03  47   ................................T....C..C.....C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  K  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_7855   91   AATGGGTGGCAGTTATATGGTATGATGGAATTAAAAAATTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCA  180
V  93.0% (225/242)  IGHV3-33*03  137  .G............................G...T....A...........................................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  D  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_7855   181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGACGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCG  270
V  93.0% (225/242)  IGHV3-33*03  227  .......G....A......A....................G.........G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  90.9% (10/11)    IGHD6-13*01  7    -------------------------------------------------------------------....G......------------  17
J  97.8% (45/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_7855   271  ACCCCTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.8% (45/46)    IGHJ5*02     13   ............A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_282297

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           377     1e-106
IGHD6-19*01                                                                                           12.2    35    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	GCTCCAG	GGCTGG	GATT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCCAGGGCTGGGATTCTTTGACTAT	AAPGLGFFDY	292	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	69	6	0	92
CDR1-IMGT	79	102	24	18	6	0	75
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	105	9	0	92.1
CDR3-IMGT (germline)	292	294	3	3	0	0	100
Total	N/A	N/A	291	266	25	0	91.4


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  A  S  G  N  T  L  T 
                    Query_7856   4    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCGTCAGTGAAAGTTGCCTGCAAGGCATCCGGAAACACCCTCACC  93
V  91.4% (266/291)  IGHV1-46*01  1    ...G...................G.......................C........G...T.............T...T.....T.....  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  N  F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  N  K  T  T  Y 
                    Query_7856   94   AACAACTTCATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTAATAAGACAACCTAT  183
V  91.4% (266/291)  IGHV1-46*01  91   .G.T...AT..................................................................GG..GC....G...C  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  L  T  M  T  R  V  T  S  T  R  T  V  Y  M  E  L  S  N  L  R  S  E  D 
                    Query_7856   184  GCACAGAAGTTCCAGGGCAGACTGACCATGACTAGGGTCACGTCCACGAGAACAGTCTACATGGAGCTGAGCAACCTGAGATCTGAGGAC  273
V  91.4% (266/291)  IGHV1-46*01  181  .....................G.C........C....A............C......................G................  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------CDR3-IMGT--------->                                  
                                       T  A  V  Y  Y  C  A  A  P  G  L  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_7856   274  ACGGCCGTGTATTACTGCGCGGCTCCAGGGCTGGGATTCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  355
V  91.4% (266/291)  IGHV1-46*01  271  .................T...-------------------------------------------------------------  291
                                       T  A  V  Y  Y  C  A                                                              
D  100.0% (6/6)     IGHD6-19*01  13   ----------------------------......------------------------------------------------  18
J  95.5% (42/44)    IGHJ4*02     5    --------------------------------------.........C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_282294

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     6e-96
IGHD2-15*01                                                                                           50.7    9e-11
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATATACT	AGGATATTGTAGTGGTGGTAGCTGCT	CCCCAGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATACTAGGATATTGTAGTGGTGGTAGCTGCTCCCCAGGGTGGTTCGACCCC	ARHILGYCSGGSCSPGWFDP	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  D  F  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7857   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATGACTTTAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (233/248)  IGHV3-21*01  47   ..........................................G.AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  S  T  Y  T  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  D  A  
                    Query_7857   91   AGTGGGTCTCATACATTAGCAGTAGTAGCACTTACACATACTACGCAGACTCAGTGAAGGGCCGATTCTCCATCTCCAGAGACGACGCCA  180
V  94.0% (233/248)  IGHV3-21*01  137  ............C......T........T.G.....T...............................A..............A......  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  T  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  H  I  L  G  Y  C  S  
                    Query_7857   181  AGACCTCACTGTATTTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGACATATACTAGGATATTGTAGTG  270
V  94.0% (233/248)  IGHV3-21*01  227  ...A..........C.........................G...........G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (26/26)   IGHD2-15*01  1    ----------------------------------------------------------------------------..............  14

                                      R3-IMGT------------------------>                                  
                                      G  G  S  C  S  P  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7857   271  GTGGTAGCTGCTCCCCAGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  100.0% (26/26)   IGHD2-15*01  15   ............------------------------------------------------------  26
J  100.0% (46/46)   IGHJ5*02     6    --------------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_282295

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           327     9e-92
IGHD2-2*01                                                                                            18.0    0.62 
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAAGGGGGGGGG	ATTGCAGTAGTA	AACCCTGCC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAAGGGGGGGGGATTGCAGTAGTAAACCCTGCCACTTCTCCTACGGTCTGGACGTC	TRSRGGDCSSKPCHFSYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  R  V  G  Y  Y  W  N  W  V  R  Q  H  P  G  K  G 
                    Query_7858   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATCGTGTCGGTTACTACTGGAACTGGGTCCGCCAGCACCCCGGGAAGGGC  90
V  92.0% (229/249)  IGHV4-31*01  49   ........................................GCA...GT.............G....A.............A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       P  E  W  I  G  Y  I  Y  Y  G  G  R  I  Y  Y  N  P  S  L  K  S  L  V  T  M  S  V  D  T  S 
                    Query_7858   91   CCGGAGTGGATTGGGTACATCTATTACGGTGGGAGGATCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATGTCAGTAGACACGTCT  180
V  92.0% (229/249)  IGHV4-31*01  139  .T.........................A.......C.C....................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  V  N  S  V  S  P  A  D  T  A  V  Y  Y  C  T  R  S  R  G  G  D  C  S 
                    Query_7858   181  AAGAACCAGTTCTCCCTGAAGGTGAATTCTGTGAGTCCCGCGGACACGGCCGTCTATTACTGTACGAGATCAAGGGGGGGGGATTGCAGT  270
V  92.0% (229/249)  IGHV4-31*01  229  .....................C...GC.......C.G................G.........G.....---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD2-2*01   6    ----------------------------------------------------------------------------------....T...  13

                                      CDR3-IMGT-------------------------->                                 
                                       S  K  P  C  H  F  S  Y  G  L  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_7858   271  AGTAAACCCTGCCACTTCTCCTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  339
D  91.7% (11/12)    IGHD2-2*01   14   ....-----------------------------------------------------------------  17
J  92.9% (52/56)    IGHJ6*02     7    -------------...A..A.......A.............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_282298

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            19.9    0.15 
IGHJ6*02                                                                                              108     8e-28


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCG	GATTTTTGGA	CC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGGATTTTTGGACCACTACTTCTACTACGGTATGGACGTC	ARVGFLDHYFYYGMDV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	234	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  A  V  S  S  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_7859   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGGTCGCCGTCAGTAGTAACTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.1% (234/246)  IGHV3-53*01  47   ................................T..A..........C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  I  I  Y  S  D  G  S  T  Y  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_7859   91   AGTGGGTCTCAATTATTTATAGCGATGGTTCCACATACTCCGCAGACTCCGTAAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  95.1% (234/246)  IGHV3-53*01  137  ...........G............G....AG........A............G.....................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  V  G  F  L  D  H  Y  F  
                    Query_7859   181  ACACCCTGTATCTTCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGTCGGATTTTTGGACCACTACTTCT  270
V  95.1% (234/246)  IGHV3-53*01  227  ....G............................C................................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (10/10)   IGHD3-3*01   8    ---------------------------------------------------------------------..........-----------  17
J  98.3% (58/59)    IGHJ6*02     4    ---------------------------------------------------------------------------------......A..  12

                                      ---------------->                                 
                                      Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7859   271  ACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  98.3% (58/59)    IGHJ6*02     13   ..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_282299

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            353     9e-100
IGHD2-8*02                                                                                            19.9    0.15  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AAAGCGGGCTC	TACTGGTGGT	A	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAAAGCGGGCTCTACTGGTGGTAACTTTGACTAC	ARKAGSTGGNFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  I  F  T  H  Y  W  M  S  W  V  R  Q  A  P  G  K  W  L  
                    Query_7860  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTTACTCACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGTGGCTGG  90
V  95.6% (237/248)  IGHV3-7*03  47   ....................................CC....G.AG.....................................G......  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  D  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7860  91   AGTGGGTTGCCGACATAAAGCAGGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (237/248)  IGHV3-7*03  137  .......G...A..........A...................................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                     K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  K  A  G  S  T  G  G  
                    Query_7860  181  AGAACTCAGTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAAAAGCGGGCTCTACTGGTGGTA  270
V  95.6% (237/248)  IGHV3-7*03  227  ........C.G.........................................................----------------------  294
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD2-8*02  10   -------------------------------------------------------------------------------..........-  19

                                     ---------->                                  
                                     N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7860  271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (45/45)   IGHJ4*02    4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_278630

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           416     2e-118
IGHD3-16*01                                                                                           12.2    36    
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGA	AATTGGTAACACCTAATTGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTAGGGACGTC	ARRGKLVTPNWDYGRDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	277	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  P  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_7861   2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCCCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAC  91
V  96.2% (277/288)  IGHV1-18*04  7    ...................C......................T..........................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  C  Y  N  G  N  T  K  Y  A  L 
                    Query_7861   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGTTGTTACAATGGTAACACAAAGTATGCACTG  181
V  96.2% (277/288)  IGHV1-18*04  97   ...........................................................CGC..................C.......A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  H  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_7861   182  AAGCACCAGGGCAGAGTCACCATGACCACAGACACATCGACGAGCACAGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.2% (277/288)  IGHV1-18*04  187  ....T.................................C..............C....................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------CDR3-IMGT-------------------->                           
                                       V  Y  Y  C  A  R  R  G  K  L  V  T  P  N  W  D  Y  G  R  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_7861   272  GTGTATTACTGTGCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTAGGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  361
V  96.2% (277/288)  IGHV1-18*04  277  ..................------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD3-16*01  18   -------------------......-----------------------------------------------------------------  23
J  96.0% (48/50)    IGHJ6*02     13   ----------------------------------------------.........T..................................  56

                                            
                                       P  S 
                    Query_7861   362  CCCTCA  367
J  96.0% (48/50)    IGHJ6*02     57   T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_67931

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            324     8e-91
IGHD2-15*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACA	GTGGTAG	GAGGAATCAGGCCCTCGCAAC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACAGTGGTAGGAGGAATCAGGCCCTCGCAACTTGACTAC	ARTVVGGIRPSQLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  S  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_7862   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTCTTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (227/247)  IGHV3-7*03   47   .............................................G..A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  E  A  G  N  E  R  N  F  V  D  S  M  K  G  R  L  T  I  S  R  D  N  A  
                    Query_7862   91   AGTGGGTGGCCAACATAAACGAGGCTGGAAATGAGAGAAACTTTGTTGACTCTATGAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  91.9% (227/247)  IGHV3-7*03   137  ...................GC.A.A.....G.....A.T...A...G......G...........T........................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  K  S  L  Y  L  Q  M  H  S  L  R  G  E  D  T  G  V  Y  Y  C  A  R  T  V  V  G  G  I  R  
                    Query_7862   181  AGAAGTCACTGTATCTGCAAATGCACAGCCTGAGAGGCGAAGACACGGGCGTTTATTACTGTGCGAGGACAGTGGTAGGAGGAATCAGGC  270
V  91.9% (227/247)  IGHV3-7*03   227  ....C..................A............C...G.......C...G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-15*01  15   -----------------------------------------------------------------------.......------------  21

                                      ---------------->                                  
                                      P  S  Q  L  D  Y  W  G  Q  G  T  L  V  T  V  S  T  
                    Query_7862   271  CCTCGCAACTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCACAG  321
J  97.6% (41/42)    IGHJ4*02     7    ---------......................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_288489

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            427     1e-121
IGHD3-3*01                                                                                            19.9    0.18  
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGCCGGTCCTA	TTTTGGAGTG	ATACGAGAGCGGTGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGCCGGTCCTATTTTGGAGTGATACGAGAGCGGTGTTACTTTGACTAC	ARCRSYFGVIRERCYFDY	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_7863  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  97.2% (281/289)  IGHV1-2*04  6    ..................G.......................................................................  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  N  G  D  T  H  Y  A  L
                    Query_7863  91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAATGGTGACACACATTATGCACT  180
V  97.2% (281/289)  IGHV1-2*04  96   ....................................................................G.....G....A.C.......A  185
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       E  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  K  S  D  D  T  A
                    Query_7863  181  GGAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAAATCTGACGACACGGC  270
V  97.2% (281/289)  IGHV1-2*04  186  .A........................................................................G...............  275
                                       K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                     ------------><----------------------CDR3-IMGT--------------------->                       
                                       V  Y  Y  C  A  R  C  R  S  Y  F  G  V  I  R  E  R  C  Y  F  D  Y  W  G  Q  G  T  L  V  T
                    Query_7863  271  CGTGTATTACTGTGCGAGATGCCGGTCCTATTTTGGAGTGATACGAGAGCGGTGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCAC  360
V  97.2% (281/289)  IGHV1-2*04  276  ...................-----------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD3-3*01  11   ------------------------------..........--------------------------------------------------  20
J  100.0% (46/46)   IGHJ4*02    3    -------------------------------------------------------...................................  37

                                                
                                       V  S  S  
                    Query_7863  361  CGTCTCCTCAG  371
J  100.0% (46/46)   IGHJ4*02    38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_67935

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD6-25*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAGG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTC	ARQSSAGRTRYGMDV	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	69	2	0	97.2
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	292	275	17	0	94.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  D  
                    Query_7864   7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATTCGACTTTACCGACT  96
V  94.2% (275/292)  IGHV5-51*01  5    .....................................C.............................T.......A.AG.......AG..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  V  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  
                    Query_7864   97   ACTGGATCGTCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACGAGATACAGTC  186
V  94.2% (275/292)  IGHV5-51*01  95   .........G..............T......................................................C........C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  V  D  E  S  I  R  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  
                    Query_7864   187  CGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACGAGTCCATCCGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCG  276
V  94.2% (275/292)  IGHV5-51*01  185  ..............................C....A........A.......................A.....................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------CDR3-IMGT----------------->                               
                                      A  M  Y  F  C  A  R  Q  S  S  A  G  R  T  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  
                    Query_7864   277  CCATGTATTTTTGTGCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGT  366
V  94.2% (275/292)  IGHV5-51*01  275  .........AC...........--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD6-25*01  7    -----------------------.......------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   --------------------------------------------............................................C.  60

                                        
                                      S 
                    Query_7864   367  CA  368
J  97.9% (47/48)    IGHJ6*02     61   ..  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_67937

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD2-21*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGGGGG	ATTGTGATGGT	ATTAACTGCTTCCCCTGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGGATTGTGATGGTATTAACTGCTTCCCCTGGTACTACTATTATGGAATGCACGTC	AKGDCDGINCFPWYYYYGMHV	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	221	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  L  Y  G  G  S  F  S  G  H  Y  W  I  W  L  R  Q  S  P  G  K  G  L  E 
                    Query_7865   1    ACCCTGTCCCTCACCTGCGCTCTCTATGGTGGGTCCTTCAGTGGTCACTACTGGATTTGGCTCCGCCAGTCCCCCGGGAAGGGGCTGGAG  90
V  91.7% (221/241)  IGHV4-34*01  49   .....................G.......................T.........GC...A........C....A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  K  Y  N  S  S  L  K  S  R  V  A  M  S  I  D  A  S  K  S 
                    Query_7865   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACGAAGTACAACTCGTCCCTCAAGAGTCGAGTCGCCATGTCAATAGACGCGTCCAAGAGT  180
V  91.7% (221/241)  IGHV4-34*01  139  ................................C..C......C....................A....A...G.....A.........AC  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  Y  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  G  D  C  D  G  I  N  C  F 
                    Query_7865   181  CAATTCTACCTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAAGGGGGATTGTGATGGTATTAACTGCTTC  270
V  91.7% (221/241)  IGHV4-34*01  229  ..G....C...........G...........................G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (10/11)    IGHD2-21*01  6    -------------------------------------------------------------------......G....------------  16

                                      MGT-------------------------->                                 
                                       P  W  Y  Y  Y  Y  G  M  H  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_7865   271  CCCTGGTACTACTATTATGGAATGCACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  333
J  91.2% (52/57)    IGHJ6*02     6    ------........C..C..T...G...........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_67936

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*11                                                                                           380     1e-107
IGHD3-3*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*11	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	TTTTGGA	TTACAGTGCGACGAGAAGCA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTTGGATTACAGTGCGACGAGAAGCAAC	ARLLDYSATRSN	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	69	5	0	93.2
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	105	9	0	92.1
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	268	25	0	91.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  D  V  K  K  P  G  S  S  V  K  I  S  C  T  S  S  G  G  S  F  S  
                    Query_7866   2    AGGTCCAGCTGGTACAGTCTGGGGCTGACGTGAAGAAGCCTGGGTCCTCGGTGAAGATCTCCTGCACGTCTTCTGGAGGCAGCTTCAGTG  91
V  91.5% (268/293)  IGHV1-69*11  2    .............G..............G...........................G.........A.G............C......CA  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  A  V  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  F  P  I  F  G  T  V  E  Y  
                    Query_7866   92   ACTATGCTGTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCAGCATCTTCCCTATCTTTGGCACAGTAGAGTACG  181
V  91.5% (268/293)  IGHV1-69*11  92   G.......A..............................................A..G...A........C....T....C.A.C....  181
                                      S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  T  A  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  Q  F  Q  G  R  V  S  I  T  A  D  D  S  T  T  T  A  Y  M  E  L  S  S  L  T  S  E  D  
                    Query_7866   182  CACAGCAGTTCCAGGGGAGAGTCTCGATTACCGCGGACGATTCCACGACCACTGCCTACATGGAGCTGAGCAGCCTGACATCTGAGGACA  271
V  91.5% (268/293)  IGHV1-69*11  182  .....A..........C......A................A.......G...A.........................G...........  271
                                      A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><-------------CDR3-IMGT------------>                               
                                      T  A  V  Y  Y  C  A  R  L  L  D  Y  S  A  T  R  S  N  W  G  Q  G  T  L  V  T  V  S  
                    Query_7866   272  CGGCCGTGTATTACTGTGCGAGACTTTTGGATTACAGTGCGACGAGAAGCAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  355
V  91.5% (268/293)  IGHV1-69*11  272  .......................-------------------------------------------------------------  294
                                      T  A  V  Y  Y  C  A  R                                                              
D  100.0% (7/7)     IGHD3-3*01   11   ------------------------.......-----------------------------------------------------  17
J  100.0% (33/33)   IGHJ4*02     13   ---------------------------------------------------.................................  45


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_67938

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           357     1e-100
IGHD3-22*01                                                                                           14.1    8.4   
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGA	TATGATGGTA	ATGATAAAGC	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGATATGATGGTAATGATAAAGCTGCTTTTGACATC	AREGYDGNDKAAFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7867   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAGATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-48*03  47   ....................................................A.....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  T  T  G  G  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7867   91   AGTGGATTTCATATATTAGTACTACTGGTGGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (239/250)  IGHV3-48*03  137  .....G.......C.......G..G....A............................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  G  Y  D  G  N  D  
                    Query_7867   181  AGAACTCACTATTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTGCGAGAGAGGGATATGATGGTAATGATA  270
V  95.6% (239/250)  IGHV3-48*03  227  ..........G.A.....................................G.......C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-22*01  8    --------------------------------------------------------------------------......A...------  17

                                      ---------------->                                  
                                      K  A  A  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_7867   271  AAGCTGCTTTTGACATCTGGGGCCAAGGGACAATGGTCATCGTCTCTTCAG  321
J  95.7% (45/47)    IGHJ3*02     4    ----.........T.........................C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_38673

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTGTACGAGGCGACTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATGTGTACGAGGCGACTCATCAATATAGTGGCTACATGATTAATGACTAC	GKDVYEATHQYSGYMINDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7868   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAAGTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  E  S  G  A  S  T  N  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7868   91   AATGGGTCTCAGGTATCAGTGAGAGCGGTGCTAGCACAAATCACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-23*01  137  .G..........C...T....GT..T....G.......T.CT................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  I  S  L  T  V  E  D  T  A  V  Y  Y  C  G  K  D  V  Y  E  A  T  H  
                    Query_7868   181  AGAACACACTGTATCTGCAAATGATCAGCCTGACAGTCGAGGACACGGCCGTATATTATTGTGGGAAAGATGTGTACGAGGCGACTCATC  270
V  92.8% (232/250)  IGHV3-23*01  227  .......G................A........G..C.....................C....C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_7868   271  AATATAGTGGCTACATGATTAATGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  97.6% (40/41)    IGHJ4*02     8    ----------------------..............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_38671

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           367     6e-104
IGHD1-7*01                                                                                            16.1    2.5   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ACTGGAAATAC	ATAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTC	ARDRTGNTYYGLDV	290	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	70	4	0	94.6
CDR1-IMGT	77	100	24	16	8	0	66.7
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	101	13	0	88.6
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	265	30	0	89.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  
                    Query_7869   3    AGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTATACTTTCAGTA  92
V  89.8% (265/295)  IGHV1-18*01  2    ..G.T...............................A.................................T........C..C..T.CC.  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  D  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  S  F  N  G  N  T  I  Y  
                    Query_7869   93   ATGATGGTATTAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCTCTTTCAATGGAAACACAATCTACG  182
V  89.8% (265/295)  IGHV1-18*01  92   GCT.......C............................................A.........G...A......T.......A...T.  181
                                      S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  N  L  Q  G  R  V  T  M  T  T  E  T  S  T  T  T  A  Y  M  E  L  R  S  L  T  Y  D  D  
                    Query_7869   183  CACAGAATTTACAGGGCAGAGTTACCATGACCACAGAAACTTCTACGACCACAGCCTACATGGAGCTGAGGAGCCTGACATATGACGACA  272
V  89.8% (265/295)  IGHV1-18*01  182  .......GC.C...........C..............C..A..C....G.............................G..C........  271
                                      A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  V  Y  F  C  A  R  D  R  T  G  N  T  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  
                    Query_7869   273  CGGCCGTGTATTTCTGTGCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCT  362
V  89.8% (265/295)  IGHV1-18*01  272  ............A............-----------------------------------------------------------------  296
                                      T  A  V  Y  Y  C  A  R                                                                    
D  90.9% (10/11)    IGHD1-7*01   7    -----------------------------.......C...--------------------------------------------------  17
J  95.8% (46/48)    IGHJ6*02     15   --------------------------------------------......A....C..................................  60

                                        
                                      S 
                    Query_7869   363  CA  364
J  95.8% (46/48)    IGHJ6*02     61   ..  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_38676

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           272     2e-75
IGHD2-21*02                                                                                           23.8    0.010
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGGAACTGGA	GGTGGTGACTGC	CTT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGGAACTGGAGGTGGTGACTGCCTTGACCTC	ARAGTGGGDCLDL	230	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	47	4	0	92.2
CDR2-IMGT	92	115	24	20	4	0	83.3
FR3-IMGT	116	229	114	100	14	0	87.7
CDR3-IMGT (germline)	230	236	7	7	0	0	100
Total	N/A	N/A	224	199	25	0	88.8


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  S  F  S  G  F  G  M  H  W  V  R  Q  A  P  G  R  G  L  E  W  V  A  L  I  R  F  D
                    Query_7870   13   GTCTGGATTCAGCTTCAGTGGCTTTGGCATGCATTGGGTCCGCCAGGCTCCAGGCAGGGGCCTGGAGTGGGTGGCACTTATACGGTTTGA  102
V  88.8% (199/224)  IGHV3-33*01  72   ...........C.......A...A.........C......................A...G...............G.....T...A...  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  T  N  Y  A  A  F  A  K  S  R  F  I  I  S  R  D  N  S  K  N  T  M  D  L  Q  M  N
                    Query_7870   103  TGGGAGTAATACAAATTATGCAGCCTTCGCGAAGAGTCGATTCATCATCTCCAGAGACAATTCCAAGAACACGATGGATCTGCAGATGAA  192
V  88.8% (199/224)  IGHV3-33*01  162  ...A.......A.T.C.......A..C..T....G.C.......C............................C..T.......A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------CDR3-IMGT-------------->              
                                        S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  A  G  T  G  G  G  D  C  L  D  L  W  G  Q  G  T
                    Query_7870   193  CAGTCTGAGAGTCGAGGATACGGCTGTGTATTACTGTGCGAGAGCCGGAACTGGAGGTGGTGACTGCCTTGACCTCTGGGGCCAGGGAAC  282
V  88.8% (199/224)  IGHV3-33*01  252  ...C.......C......C.........................----------------------------------------------  295
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (12/12)   IGHD2-21*02  11   -------------------------------------------------------............-----------------------  22
J  97.5% (39/40)    IGHJ5*02     12   ----------------------------------------------------------------------....C...............  31

                                                          
                                        L  V  T  V  S  S  
                    Query_7870   283  CCTGGTCACCGTCTCCTCAG  302
J  97.5% (39/40)    IGHJ5*02     32   ....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_18169

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           336     1e-94
IGHD4-4*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAC	TTGGTCCTC	ACAGTAA	TGGCCCCCCTTTGAG	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGACTTGGTCCTCACAGTAATGGCCCCCCTTTGAGCTAT	ARLGPHSNGPPLSY	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	102	12	0	89.5
CDR3-IMGT (germline)	249	255	7	6	1	0	85.7
Total	N/A	N/A	255	235	20	0	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  S  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7871   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGCCTCTGCTATGCACTGGGTCCGCCAGGCTCCCGGGAAAGGGCTGG  90
V  92.2% (235/255)  IGHV3-73*01  47   .........A...................................G............................T...............  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  S  K  A  K  N  Y  A  T  E  Y  G  A  S  V  Q  G  R  F  T  I  S  R  D  
                    Query_7871   91   AGTGGGTTGGCCGTATCAGAAGCAAAGCTAAGAATTATGCGACAGAATATGGTGCGTCGGTCCAAGGCAGGTTCACCATCTCCAGAGATG  180
V  92.2% (235/255)  IGHV3-73*01  137  ................T..............C.G...C.......C.....C.........GA...........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  N  N  V  A  Y  L  Q  M  N  T  L  K  T  E  D  T  A  V  Y  F  C  A  R  L  G  P  H  S  
                    Query_7871   181  ATTCAAACAACGTGGCGTACTTGCAAATGAACACCCTGAAAACCGAGGACACGGCCGTTTATTTCTGTGCTAGACTTGGTCCTCACAGTA  270
V  92.2% (235/255)  IGHV3-73*01  227  .......G...AC......TC............G........................G....A....A......---------------  301
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (7/7)     IGHD4-4*01   6    ------------------------------------------------------------------------------------......  11

                                      IMGT--------------->                                  
                                      N  G  P  P  L  S  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_7871   271  ATGGCCCCCCTTTGAGCTATTGGGGCCAGGGGACCCAGGTCACCGTCTCCTCAG  324
D  100.0% (7/7)     IGHD4-4*01   12   .-----------------------------------------------------  12
J  92.1% (35/38)    IGHJ4*02     11   ----------------...C...........A....T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_38674

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           360     1e-101
IGHD5-18*01                                                                                           19.9    0.16  
IGHJ5*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTAGA	CAGGCAGCTTTC	GGATACAGTTTTGGTT	TCGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGACAGGCAGCTTTCGGATACAGTTTTGGTTTCGGCTGGTGCGACCCC	TRQAAFGYSFGFGWCDP	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	110	4	0	96.5
CDR3-IMGT (germline)	249	254	6	6	0	0	100
Total	N/A	N/A	254	242	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  G  D  Y  T  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_7872   1    GGTCCCTGAGACTCTCCTGTTCAGCTTCTGGATTCACCTTTGGTGATTATACTATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.3% (242/254)  IGHV3-49*04  47   ....................A.............................G......G................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  A  F  I  R  S  K  T  H  G  G  T  T  E  Y  A  A  S  V  R  G  R  F  S  I  S  R  D  
                    Query_7872   91   AGTGGGTTGCTTTCATCAGAAGCAAAACTCATGGTGGGACAACAGAATACGCCGCGTCTGTGAGAGGCAGATTCAGCATCTCAAGAGATG  180
V  95.3% (242/254)  IGHV3-49*04  137  .......A.G......T.........G..T.................................A...........C..............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  G  V  Y  Y  C  T  R  Q  A  A  F  G  
                    Query_7872   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGGCGTGTATTATTGTACTAGACAGGCAGCTTTCGGAT  270
V  95.3% (242/254)  IGHV3-49*04  227  ......................................................C.........C.........----------------  300
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  87.5% (14/16)    IGHD5-18*01  3    --------------------------------------------------------------------------------------....  6

                                      DR3-IMGT-------------------->                                  
                                      Y  S  F  G  F  G  W  C  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7872   271  ACAGTTTTGGTTTCGGCTGGTGCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  87.5% (14/16)    IGHD5-18*01  7    ....C.A.....---------------------------------------------------  18
J  97.9% (46/47)    IGHJ5*02     5    ----------------.....T.........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_18164

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           422     2e-120
IGHD5-12*01                                                                                           16.1    2.5   
IGHJ2*01                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAC	GGATGAGAGA	TGGCTACAATT	TTGTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACGGATGAGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTC	ATRMRDGYNFVDWYFDL	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  N  F  A  N  Y
                    Query_7873   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAACTTTGCCAACTA  90
V  96.6% (280/290)  IGHV5-51*01  6    .................................................................G...........G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_7873   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  96.6% (280/290)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  H  W  S  S  L  Q  A  S  D  T  A
                    Query_7873   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCACTGGAGTAGCCTCCAGGCCTCGGACACCGC  270
V  96.6% (280/290)  IGHV5-51*01  186  ............................................................G.....C.....GA................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  T  R  M  R  D  G  Y  N  F  V  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V
                    Query_7873   271  CATGTATTACTGTGCGACACGGATGAGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGT  360
V  96.6% (280/290)  IGHV5-51*01  276  .................G..----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  90.9% (10/11)    IGHD5-12*01  11   ------------------------------.......G...-------------------------------------------------  21
J  100.0% (51/51)   IGHJ2*01     3    -----------------------------------------------...........................................  45

                                              
                                        S  S  
                    Query_7873   361  CTCCTCAG  368
J  100.0% (51/51)   IGHJ2*01     46   ........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_18165

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           392     2e-111
IGHD5-18*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCCTTGTTGGCCTTGCA	GTGGATAC	TATTTTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCCTTGTTGGCCTTGCAGTGGATACTATTTTCTGACTAT	ARAPLLALQWILFSDY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  S  S  I  S  S  Y 
                    Query_7874   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTCTTCCATTAGCAGTTAT  91
V  93.4% (270/289)  IGHV1-18*01  7    .........................................................................ACA..T...C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  A  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  T  A  Y  N  G  K  T  N  Y  A  Q 
                    Query_7874   92   GGAGTCGCCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCACCGCTTATAATGGTAAAACAAACTATGCACAG  181
V  93.4% (270/289)  IGHV1-18*01  97   ..TA..AG...........................G......................G......C........C...............  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_7874   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  93.4% (270/289)  IGHV1-18*01  187  ...C........................................................C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       I  Y  Y  C  A  R  A  P  L  L  A  L  Q  W  I  L  F  S  D  Y  W  G  Q  G  T  P  V  T  V  S 
                    Query_7874   272  ATTTATTATTGTGCGAGAGCCCCCTTGTTGGCCTTGCAGTGGATACTATTTTCTGACTATTGGGGCCAGGGAACCCCGGTCACCGTCTCC  361
V  93.4% (270/289)  IGHV1-18*01  277  G.G.....C..........-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (8/8)     IGHD5-18*01  1    --------------------------------------........--------------------------------------------  8
J  95.1% (39/41)    IGHJ4*02     8    -----------------------------------------------------......C................T.............  44

                                          
                                       S  
                    Query_7874   362  TCAG  365
J  95.1% (39/41)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_18166

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD3-9*01                                                                                            16.1    2.6   
IGHJ6*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGAAGGATTCCT	ATATTTTG	GGGAATCGTCATCTC	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGAAGGATTCCTATATTTTGGGGAATCGTCATCTCACGGTATGGACGTC	ARQEGFLYFGESSSHGMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	69	5	0	93.2
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	111	3	0	97.4
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	295	280	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  T  F  T  
                    Query_7875   4    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGGTCTGGATACACCTTTACCA  93
V  94.9% (280/295)  IGHV5-51*01  2    ....G.....G.............................C........................A....T..........G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      K  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  S  P  G  D  S  N  T  R  Y  
                    Query_7875   94   AATACTGGATCGGCTGGGTGCGCCAGATGCCCGGCAAAGGCCTGGAGTGGATGGGAATCATCTCTCCTGGTGACTCTAATACCAGATACA  183
V  94.9% (280/295)  IGHV5-51*01  92   GC................................G....................G.......A.............G............  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  V  K  A  S  D  
                    Query_7875   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCGTGAAGGCCTCGGACA  273
V  94.9% (280/295)  IGHV5-51*01  182  ................................................G.........................C...............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      S  A  M  Y  Y  C  A  R  Q  E  G  F  L  Y  F  G  E  S  S  S  H  G  M  D  V  W  G  Q  G  T  
                    Query_7875   274  GCGCCATGTATTACTGTGCGAGACAAGAAGGATTCCTATATTTTGGGGAATCGTCATCTCACGGTATGGACGTCTGGGGCCAAGGGACCA  363
V  94.9% (280/295)  IGHV5-51*01  272  C........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD3-9*01   9    -------------------------------------........---------------------------------------------  16
J  100.0% (47/47)   IGHJ6*02     16   ------------------------------------------------------------..............................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_7875   364  CGGTCACCGTCTCCTCA  380
J  100.0% (47/47)   IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_38679

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           350     8e-99
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATCGTGGTG	CCTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATCGTGGTGCCTGCTTTGCCCAC	ARGLHYYDRGACFAH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  R  V  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_7876   1    ACCCTGTCCCTCACCTGCACTGTCTCTCGTGTCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*03  49   ...........................G...G...................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  K  S  P  K  S  R  I  T  I  S  V  D  T  S 
                    Query_7876   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAATAAGTCCCCCAAGAGTCGAATTACCATATCGGTAGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*03  139  ..................................G............CCC.....T..........G..........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R 
                    Query_7876   181  AAGAACCAGTTCTCCCTGACGCTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCCATTACTATGATCGT  270
V  94.8% (237/250)  IGHV4-31*03  229  ...................A.....G...........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (16/18)    IGHD3-22*01  3    ----------------------------------------------------------------------------...........A..  16

                                      ----------------->                                  
                                       G  A  C  F  A  H  W  G  Q  G  P  L  L  T  V  S  P  
                    Query_7876   271  GGTGCCTGCTTTGCCCACTGGGGCCAGGGACCCCTGCTCACCGTCTCCCCAG  322
D  88.9% (16/18)    IGHD3-22*01  17   A...------------------------------------------------  20
J  88.6% (39/44)    IGHJ4*02     5    --------.....A.T..............A.....G...........T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_18160

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           293     2e-81
IGHD1-7*01                                                                                            18.0    0.56 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGACGTGG	ACTGGAACT	CAGGGTCCCTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGACGTGGACTGGAACTCAGGGTCCCTATGACTAC	AKGTWTGTQGPYDY	230	271	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	20	4	0	83.3
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	21	3	0	87.5
FR3-IMGT	116	229	114	105	9	0	92.1
CDR3-IMGT (germline)	230	236	7	7	0	0	100
Total	N/A	N/A	223	205	18	0	91.9


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  V  T  F  S  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I  S  G  S 
                    Query_7877   14   TCTGGAGTCACCTTTAGTGACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAACTATTAGTGGTAGT  103
V  91.9% (205/223)  IGHV3-23*01  73   ......T..........CAG.......................................G...............G..............  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  G  M  T  F  Y  A  D  S  M  K  G  R  F  T  I  S  R  D  N  S  K  N  M  V  Y  L  E  M  N 
                    Query_7877   104  GGAGGTATGACATTCTACGCAGACTCCATGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCAAGAACATGGTGTATCTCGAAATGAAC  193
V  91.9% (205/223)  IGHV3-23*01  163  ..T....GC....A.............G...............................T..........C.C.......GC........  252
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><----------------CDR3-IMGT--------------->            
                                       S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  G  T  W  T  G  T  Q  G  P  Y  D  Y  W  G  Q  G 
                    Query_7877   194  AGCCTGCGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGGGACGTGGACTGGAACTCAGGGTCCCTATGACTACTGGGGCCAGGGA  283
V  91.9% (205/223)  IGHV3-23*01  253  ......A.................G..................-----------------------------------------------  295
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  100.0% (9/9)     IGHD1-7*01   7    ---------------------------------------------------.........------------------------------  15
J  100.0% (41/41)   IGHJ4*02     8    -----------------------------------------------------------------------...................  26

                                                            
                                       T  L  V  T  V  S  S  
                    Query_7877   284  ACCCTGGTCACCGTCTCCTCAG  305
J  100.0% (41/41)   IGHJ4*02     27   ......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_18161

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     9e-121
IGHD3-16*01                                                                                           35.3    4e-06 
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCTA	GTATTATGTTTACATTTGGGGGAG	AAACACACCGTCTGAC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAGTATTATGTTTACATTTGGGGGAGAAACACACCGTCTGACTGATGCTTTTGAGATC	ARASIMFTFGGETHRLTDAFEI	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	280	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  S  Y
                    Query_7878   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTAGCAGCTA  90
V  96.9% (280/289)  IGHV5-51*03  6    .............................................................................G.....C......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  E  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  G  P
                    Query_7878   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGGAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATACCAGATACGGGCC  180
V  96.9% (280/289)  IGHV5-51*03  96   ...............................A....................A................................A.C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7878   181  GTCCTTCGAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (280/289)  IGHV5-51*03  186  .......C................C.................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------------CDR3-IMGT--------------------------->           
                                        M  Y  Y  C  A  R  A  S  I  M  F  T  F  G  G  E  T  H  R  L  T  D  A  F  E  I  W  G  Q  G
                    Query_7878   271  CATGTATTACTGCGCGAGAGCTAGTATTATGTTTACATTTGGGGGAGAAACACACCGTCTGACTGATGCTTTTGAGATCTGGGGCCAAGG  360
V  96.9% (280/289)  IGHV5-51*03  276  ............T......-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (22/24)    IGHD3-16*01  1    -----------------------........A....G..........-------------------------------------------  24
J  96.0% (48/50)    IGHJ3*02     1    ---------------------------------------------------------------............T..............  27

                                                             
                                        T  V  V  T  V  S  S  
                    Query_7878   361  GACAGTGGTCACCGTCTCTTCAG  383
J  96.0% (48/50)    IGHJ3*02     28   ....A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_18162

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD3-10*01                                                                                           16.1    2.6   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTC	TCGGGGAG	GGGGTCGTTCGACTCCTCTATAGTCCTATACTTCTTCAATTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCTCGGGGAGGGGGTCGTTCGACTCCTCTATAGTCCTATACTTCTTCAATTAT	ARHVSGRGSFDSSIVLYFFNY	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	268	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  E  D  S  F  N  N  F
                    Query_7879   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGATCTGAAGACAGCTTTAATAATTT  90
V  92.1% (268/291)  IGHV5-51*01  6    ..............................A...................................T....G.T.........CC.GC.A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  R  P  G  K  G  L  E  W  M  G  F  I  Y  P  G  D  S  G  T  K  Y  S  P
                    Query_7879   91   CTGGATCGCCTGGGTGCGCCAGAGGCCCGGGAAAGGCCTGGAGTGGATGGGGTTCATCTATCCTGGTGACTCTGGTACCAAGTACAGCCC  180
V  92.1% (268/291)  IGHV5-51*01  96   ........G..............T............................A.....................A.....GA........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  I  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  T  S  L  K  A  S  D  S  A
                    Query_7879   181  GTCCTTCCAAGGCCAGATCACCATCTCAGCCGACAAGTCCACCAGTACCGCCTACCTGCAGTGGACTAGTCTGAAGGCCTCGGACAGCGC  270
V  92.1% (268/291)  IGHV5-51*01  186  ................G........................T...C...................GC..C................C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        M  Y  Y  C  A  R  H  V  S  G  R  G  S  F  D  S  S  I  V  L  Y  F  F  N  Y  W  G  Q  G  T
                    Query_7879   271  CATGTATTATTGTGCGAGACATGTCTCGGGGAGGGGGTCGTTCGACTCCTCTATAGTCCTATACTTCTTCAATTATTGGGGCCAGGGAAC  360
V  92.1% (268/291)  IGHV5-51*01  276  .........C...........---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-10*01  14   -------------------------........---------------------------------------------------------  21
J  100.0% (34/34)   IGHJ4*02     15   ----------------------------------------------------------------------------..............  28

                                                          
                                        L  V  T  V  S  S  
                    Query_7879   361  CCTGGTCACCGTCTCCTCAG  380
J  100.0% (34/34)   IGHJ4*02     29   ....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_18163

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            325     3e-91
IGHD6-13*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACCTGGTACTCGGGGTTTTGACTAC	ARHLGTPGTRGFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	22	2	3	81.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	246	229	14	3	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_7880   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  87
V  93.1% (229/246)  IGHV4-4*02   49   ...............................G.....T........GTA.......................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  S  Y  H  S  G  R  T  N  Y  N  A  S  F  Q  S  R  V  T  I  S  V  D  T  S  K 
                    Query_7880   88   GAGTGGATTGGGGAATCCTATCATAGTGGGCGCACCAACTACAACGCGTCCTTCCAGAGTCGAGTCACCATATCAGTAGACACGTCCAAG  177
V  93.1% (229/246)  IGHV4-4*02   139  ...............AT.............A..............C.....C..A...........................A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  P  G  T  R 
                    Query_7880   178  AATCAATTCTCCCTGAATCTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACCTGGTACTCGG  267
V  93.1% (229/246)  IGHV4-4*02   229  ..C..G...........G....G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7880   268  GGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (43/43)   IGHJ4*02     6    ---...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_68896

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7881   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_7881   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_7881   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_7881   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_68894

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           315     5e-88
IGHD5-12*01                                                                                           18.0    0.60 
IGHJ2*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGCGATGTATGAT	TATAGTGGC	ACAATATAT	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGCGATGTATGATTATAGTGGCACAATATATTGGTACTTCGATCTC	ARQAMYDYSGTIYWYFDL	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	226	25	0	90


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  M  S  S  R  T  Y  P  W  A  W  V  R  Q  P  P  R  K  G 
                    Query_7882   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATGAGTAGTAGGACCTACCCCTGGGCCTGGGTCCGCCAGCCCCCACGGAAGGGC  90
V  90.0% (226/251)  IGHV4-39*01  49   ...............................G......C..C.....T.GT...TA.....G....A..............G.......G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  N  T  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7882   91   CTGGAGTGGATTGGGACCATCTATAACACTGGGAGGACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCG  180
V  90.0% (226/251)  IGHV4-39*01  139  ................GT......T.T.G......C............................................A........C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       N  N  Q  F  S  L  H  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  A  M  Y  D  Y  S 
                    Query_7882   181  AACAACCAGTTCTCCCTGCACCTGAACTCTGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACAAGCGATGTATGATTATAGT  270
V  90.0% (226/251)  IGHV4-39*01  229  ..G...............A.G....G...........................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD5-12*01  6    ------------------------------------------------------------------------------------......  11

                                      -IMGT--------------------->                                  
                                       G  T  I  Y  W  Y  F  D  L  W  G  R  G  S  L  V  A  V  S  S  
                    Query_7882   271  GGCACAATATATTGGTACTTCGATCTCTGGGGCCGTGGCTCCCTGGTCGCTGTTTCCTCAG  331
D  100.0% (9/9)     IGHD5-12*01  12   ...----------------------------------------------------------  14
J  93.9% (46/49)    IGHJ2*01     5    ------------...........................A........A....C.......  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_92867

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           282     4e-78
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GTTCTCC	ATTGTAGTAGTTCCAG	TCCCGGATGAAA	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGTTCTCCATTGTAGTAGTTCCAGTCCCGGATGAAAACTCCTACGGAATGGACGTC	AKEFSIVVVPVPDENSYGMDV	230	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	46	5	0	90.2
CDR2-IMGT	92	115	24	19	5	0	79.2
FR3-IMGT	116	229	114	105	9	0	92.1
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	202	22	0	90.2


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  T  T  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  S  V  T  G  T 
                    Query_7883   14   TCTGGATTCACCTTTACCACCCATGCCATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGGAGTGGGTCGCAAGCGTTACTGGTACT  103
V  90.2% (202/224)  IGHV3-23*01  73   ................G..G.T...............................G..................T..GCTA...G.....G.  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  K  N  I  L  F  L  Q  M  N 
                    Query_7883   104  GGAGGCAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACCCCAAGAACATCCTGTTTCTACAGATGAAC  193
V  90.2% (202/224)  IGHV3-23*01  163  ..T..T.....................................................TT.........CG....A...G..A......  252
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><--------------------------CDR3-IMGT------------------
                                       S  P  R  A  E  D  T  A  V  Y  Y  C  A  K  E  F  S  I  V  V  V  P  V  P  D  E  N  S  Y  G 
                    Query_7883   194  AGCCCGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAAGAGTTCTCCATTGTAGTAGTTCCAGTCCCGGATGAAAACTCCTACGGA  283
V  90.2% (202/224)  IGHV3-23*01  253  ....T.....................A.................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  93.8% (15/16)    IGHD2-2*01   6    ---------------------------------------------------...........A....-----------------------  21
J  92.5% (49/53)    IGHJ6*02     10   -------------------------------------------------------------------------------...A......T  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  A  S 
                    Query_7883   284  ATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCGCCTCA  325
J  92.5% (49/53)    IGHJ6*02     21   .................A..................T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_288483

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           310     1e-86
IGHD3-3*01                                                                                            18.0    0.62 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTCTTTAATG	ACGATTATTGGA	ATGATGATTTTCGTCGACACCTAGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCTTTAATGACGATTATTGGAATGATGATTTTCGTCGACACCTAGGGCTTGACAAC	ARHVFNDDYWNDDFRRHLGLDN	246	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	22	8	0	73.3
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	104	10	0	91.2
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  V  S  V  T  A  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_7884   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGTCTCTGTCACTGCCAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  89.6% (224/250)  IGHV4-39*01  50   .....TCC...A..................G...CA...GCAGT............................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  H  T  S  
                    Query_7884   94   TGGAGTGGATTGGAAATATCTATTATAGTGGGACCACCTACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCCGTGCACACGTCCA  183
V  89.6% (224/250)  IGHV4-39*01  140  .............G.G.................G...............G.......................A.....AG.........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  H  V  F  N  D  D  Y  
                    Query_7884   184  AGAATCAGTTCTCCCTGAGGCTGAATTCTGTGACCGCCGCAGACTCGGCTGTATATTACTGTGCGAGACATGTCTTTAATGACGATTATT  273
V  89.6% (224/250)  IGHV4-39*01  230  ....C.............A.....GC..................A.......G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD3-3*01   6    ---------------------------------------------------------------------------------......T..  14

                                      -CDR3-IMGT--------------------------->                                  
                                      W  N  D  D  F  R  R  H  L  G  L  D  N  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_7884   274  GGAATGATGATTTTCGTCGACACCTAGGGCTTGACAACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  345
D  91.7% (11/12)    IGHD3-3*01   15   ...---------------------------------------------------------------------  17
J  95.2% (40/42)    IGHJ4*02     7    ------------------------------.....T........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_288482

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           399     3e-113
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGCA	TATTACTATGATAGTAGT	ATTTATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGCATATTACTATGATAGTAGTATTTATCTTGACTAC	ARAAYYYDSSIYLDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	64	5	0	92.8
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  A  K  K  P  G  A  S  V  K  V  S  C  R  T  S  R  D  S  F  T  N  H 
                    Query_7885   2    CAGCTGGTGCAGTCTGGAGCGGAGGCGAAGAAGCCTGGGGCCTCGGTGAAGGTCTCCTGCAGGACTTCTCGTGACTCCTTTACCAACCAT  91
V  94.1% (272/289)  IGHV1-18*01  7    ....................T....T..................A................A.G.....G..T..A.........G.T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  N  T  N  Y  A  Q 
                    Query_7885   92   GGATTTAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAAACTATGCACAG  181
V  94.1% (272/289)  IGHV1-18*01  97   ..TA.C......................................................G.............................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  A  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_7885   182  AAGTTCCAGGGCAGAGTCACCATGGCCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.1% (272/289)  IGHV1-18*01  187  ...C....................A.................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  A  A  Y  Y  Y  D  S  S  I  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_7885   272  GTTTATTACTGTGCGAGAGCCGCATATTACTATGATAGTAGTATTTATCTTGACTACTGGGGCCAGGGAACCCTCGTCACCGTCTCCTCA  361
V  94.1% (272/289)  IGHV1-18*01  277  ..G................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (18/18)   IGHD3-22*01  2    ------------------------..................------------------------------------------------  19
J  97.6% (41/42)    IGHJ4*02     7    -------------------------------------------------.........................G...............  47

                                       
                                       
                    Query_7885   362  G  362
J  97.6% (41/42)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_9246

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q 
                    Query_7886   1    ACCCTGTCCCTCACCTGCACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAA  90
V  91.0% (223/245)  IGHV4-59*01  49   ....................T..........................C........C............C.................G.G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_7886   91   TGGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAAC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A....G.....C...T....T....G......C..............C...........C.C.........A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E 
                    Query_7886   181  CAGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAG  270
V  91.0% (223/245)  IGHV4-59*01  229  ...T.........AG..G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  1    -----------------------------------------------------------------------------............-  12

                                      -------------->                                  
                                       D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_7886   271  GATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  319
J  92.5% (37/40)    IGHJ4*02     9    ---------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_32673

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           403     1e-114
IGHD1-26*01                                                                                           10.3    132   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_7887   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  94.5% (274/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  Y  A  Q 
                    Query_7887   92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTATGCACAG  181
V  94.5% (274/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  G  S  D  D  T  A 
                    Query_7887   182  GGGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGGGGTCTGACGACACGGCC  271
V  94.5% (274/290)  IGHV1-18*01  187  AA.C....................................................................A.A...............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_7887   272  ATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  94.5% (274/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_323896

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*03                                                                                           305     3e-85
IGHD2-15*01                                                                                           10.3    127  
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATAGA	TC	AGGAT	GTGAACATACCCGCTGGCCTCCGGCTCCACTTT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATAGATCAGGATGTGAACATACCCGCTGGCCTCCGGCTCCACTTTTACGGTCTGGACGTC	AIDQDVNIPAGLRLHFYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	223	28	0	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  V  S  N  D  D  Y  F  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_7888   1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCGTCAGTAATGATGATTACTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  88.8% (223/251)  IGHV4-61*03  49   ..................A....C.................C.G..G.AG.....A..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  K  S  G  I  T  K  S  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_7888   91   CTGGAATGGATTGGCTACATCTCCAAAAGTGGGATCACCAAGTCCAACCCCTCCCTCAAGAGTCGAGTCTCCATCTCAGTTGACACGTCC  180
V  88.8% (223/251)  IGHV4-61*03  139  .....G........G..T....ATT.C.......G......C.A.........................A....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       T  N  R  F  S  L  K  L  T  S  V  T  A  V  D  T  A  V  Y  Y  C  A  I  D  Q  D  V  N  I  P 
                    Query_7888   181  ACGAACCGCTTCTCCCTGAAACTGACCTCTGTAACCGCTGTGGACACGGCCGTGTATTACTGTGCGATAGATCAGGATGTGAACATACCC  270
V  88.8% (223/251)  IGHV4-61*03  229  .A.....A............G....G......G.......C..........................G...-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD2-15*01  1    -------------------------------------------------------------------------.....------------  5

                                      CDR3-IMGT-------------------------->                                
                                       A  G  L  R  L  H  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_7888   271  GCTGGCCTCCGGCTCCACTTTTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  338
J  97.9% (46/47)    IGHJ6*02     15   ---------------------......A........................................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_323897

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_7889   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_7889   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCGGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A..A................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  L  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_7889   181  CAGTTCTCCCTGAAGCTGAGCTCTCTGACCGCTGCGGACGCGGCCGTGTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  ........................G..............A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7889   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_323894

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           293     2e-81
IGHD3-16*01                                                                                           12.2    35   
IGHJ5*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCTCTAGTCCATATGAATCCGGGGGTCCCCCCGACAGACGGCGA	TTTGGG	ACCCAATAT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCTCTAGTCCATATGAATCCGGGGGTCCCCCCGACAGACGGCGATTTGGGACCCAATATTTCGACTGC	AKVSSPYESGGPPDRRRFGTQYFDC	243	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	218	31	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  K  F  S  N  Y  A  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_7890   1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTGGATTCAAGTTTAGCAACTACGCCCTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.6% (218/249)  IGHV3-23*01  47   .....................C..C...........CC.......G...T...A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  D  I  S  S  S  S  I  K  T  D  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7890   91   AATGGGTCGCAGATATTAGTAGTAGTAGTATTAAGACAGACTATGTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCTA  180
V  87.6% (218/249)  IGHV3-23*01  137  .G......T...C.......G.....G..GG..GC...T....C.C..........................................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  M  F  L  R  M  Q  S  L  R  G  D  D  T  A  L  Y  Y  C  A  K  V  S  S  P  Y  E  S  
                    Query_7890   181  AGAACACGATGTTTCTGCGAATGCAGAGCCTGAGAGGCGACGACACAGCCTTATACTACTGTGCGAAAGTCTCTAGTCCATATGAATCCG  270
V  87.6% (218/249)  IGHV3-23*01  227  ........C...A.....A....A.C..........C...G.....G...G....T.............---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -----CDR3-IMGT-------------------------------->                                  
                                      G  G  P  P  D  R  R  R  F  G  T  Q  Y  F  D  C  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_7890   271  GGGGTCCCCCCGACAGACGGCGATTTGGGACCCAATATTTCGACTGCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  351
D  100.0% (6/6)     IGHD3-16*01  15   -----------------------......----------------------------------------------------  20
J  93.0% (40/43)    IGHJ5*01     9    --------------------------------------.......C.........A...A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_323895

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD1-1*01                                                                                            18.0    0.59 
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCAGTG	GGTACAACT	TTGGGAAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGGTACAACTTTGGGAATAACTGGTTCGACCCG	ARDPTGSGYNFGNNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  H  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7891   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGTCATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...............................G..........AG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  K  G  G  I  T  N  H  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_7891   91   TGGATTGGATATGTCTATAAGGGCGGGATCACCAACCACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G...A.....T.CA.T....G.......T...................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  H  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_7891   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCTGACACGGCCATATATCACTGTGCGAGAGATCCTACCGGCAGTGGGTACAACTTT  270
V  93.5% (229/245)  IGHV4-59*01  229  ...................................G.........G.G...T.............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD1-1*01   1    -------------------------------------------------------------------------------.........--  9

                                      -------------------->                                  
                                       G  N  N  W  F  D  P  W  G  P  G  T  L  V  T  V  S  S  
                    Query_7891   271  GGGAATAACTGGTTCGACCCGTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  325
J  95.9% (47/49)    IGHJ5*02     3    ------..............C.......A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_323892

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           364     5e-103
IGHD2-2*02                                                                                            39.1    3e-07 
IGHJ5*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAACC	ATATTGTAGTAGTTCCAGCTGCCATA	N/A	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAACCATATTGTAGTAGTTCCAGCTGCCATATGGTTCGACCCC	ARGNHIVVVPAAIWFDP	246	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_7892   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  96.8% (241/249)  IGHV4-31*02  50   .....TCC...A..............................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  I  T  I  S  V  D  T  S  
                    Query_7892   94   TGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAATTACCATATCAGTAGACACGTCTA  183
V  96.8% (241/249)  IGHV4-31*02  140  ..............T..................................................G........................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  N  H  I  V  V  V  
                    Query_7892   184  AGAATCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGAACCATATTGTAGTAGTTC  273
V  96.8% (241/249)  IGHV4-31*02  230  ....C....................C...........................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (24/26)    IGHD2-2*02   4    ---------------------------------------------------------------------------.............A.  18

                                      GT-------------------->                                  
                                      P  A  A  I  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7892   274  CAGCTGCCATATGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  92.3% (24/26)    IGHD2-2*02   19   .......T...----------------------------------------------  29
J  100.0% (46/46)   IGHJ5*02     6    -----------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_323893

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           375     2e-106
IGHD4-17*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGTATACCTGA	TGACTACGTTGAC	AC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGTATACCTGATGACTACGTTGACACCTTTGACCAG	AGIPDDYVDTFDQ	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	243	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_7893   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (243/246)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7893   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCGCCAACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (243/246)  IGHV4-31*03  139  ....................................A..T..................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  I  P  D  D  Y  V  D 
                    Query_7893   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGGGTATACCTGATGACTACGTTGAC  270
V  98.8% (243/246)  IGHV4-31*03  229  .....................................................G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  92.3% (12/13)    IGHD4-17*01  1    -----------------------------------------------------------------------------........G....  13

                                      ----------->                                  
                                       T  F  D  Q  W  G  R  G  T  L  V  T  V  S  S  
                    Query_7893   271  ACCTTTGACCAGTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  316
J  93.2% (41/44)    IGHJ4*02     5    --.......T.C.......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_9241

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           332     3e-93
IGHD6-6*01                                                                                            10.3    121  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAAA	TTTTCCA	CGTCC	CTCCTGCCGCAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAATTTTCCACGTCCCTCCTGCCGCAATACGGTATGGACGTC	VKFSTSLLPQYGMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  N  Y  I  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7894   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAATAACTATATTCTGCACTGGGTCCGCCAGGCTCCCGGGAAGGGACTGG  90
V  92.7% (230/248)  IGHV3-64*05  47   ..........................................G..G....GC.A......................A.............  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  A  I  S  S  N  G  D  S  T  Y  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7894   91   AATTTGTTTCAGCTATTAGCAGTAATGGAGATAGCACATACTCCGCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  92.7% (230/248)  IGHV3-64*05  137  ...A...............T........G.G...........A...............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  G  V  Y  Y  C  V  K  F  S  T  S  L  L  P  
                    Query_7894   181  AGAACACATTGTTTCTTCAAATGAACAGTCTGAGAGCTGAGGACACGGGTGTATATTACTGTGTGAAATTTTCCACGTCCCTCCTGCCGC  270
V  92.7% (230/248)  IGHV3-64*05  227  .......GC...A.G.........G.......................C...G...............----------------------  294
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (5/5)     IGHD6-6*01   14   ---------------------------------------------------------------------------.....----------  18

                                      ---------------->                                 
                                      Q  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7894   271  AATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  100.0% (48/48)   IGHJ6*02     15   --................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_29908

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           321     7e-90
IGHD3-16*01                                                                                           12.2    32   
IGHJ2*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGCCG	TGGGGG	CATCAAGGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGCCGTGGGGGCATCAAGGGATCCTGGTACTCCGATCTC	ARVRRGGIKGSWYSDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7895   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGACATGAGATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.2% (227/249)  IGHV3-48*03  47   ..............................................TT....A.....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  T  G  S  T  L  I  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7895   91   AGTGGGTTTCACACATTTCCACTGGTAGTACTCTTATACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  91.2% (227/249)  IGHV3-48*03  137  ...........T.....AGT.G.A..G...G.ACC...T..................................................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  V  R  R  G  G  I  K  
                    Query_7895   181  AGAATTCTCTCTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGAGAGTCCGCCGTGGGGGCATCAAGG  270
V  91.2% (227/249)  IGHV3-48*03  227  ....C..A..G.....G.................................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------------......--------  22

                                      T------------------>                                  
                                      G  S  W  Y  S  D  L  W  G  R  G  T  L  V  T  V  S  P  
                    Query_7895   271  GATCCTGGTACTCCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCCCAG  324
J  96.0% (48/50)    IGHJ2*01     4    ----........T.....................................T...  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_29909

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           310     1e-86
IGHD2-21*01                                                                                           14.1    9.2  
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGGTGT	CTATTCC	ACATGAATCCGGGGGTCCCCCCGACAGACGGCGATTTCGGACCCAATAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGTCTATTCCACATGAATCCGGGGGTCCCCCCGACAGACGGCGATTTCGGACCCAATATTTTGACTGT	ARVSIPHESGGPPDRRRFRTQYFDC	243	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7896   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.2% (222/246)  IGHV3-23*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  D  I  S  S  R  G  D  D  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7896   91   AATGGGTCTCAGATATTTCTTCTAGAGGTGATGATACACACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCTA  180
V  90.2% (222/246)  IGHV3-23*01  137  .G..........C....AG.GG...T....G.AGC...T....C............................................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      M  N  T  V  Y  L  Q  M  K  G  L  R  G  E  D  T  G  V  Y  Y  C  A  R  V  S  I  P  H  E  S  
                    Query_7896   181  TGAACACGGTGTATCTGCAAATGAAAGGCCTGCGAGGCGAGGACACAGGCGTTTACTACTGTGCGAGGGTGTCTATTCCACATGAATCCG  270
V  90.2% (222/246)  IGHV3-23*01  227  A.......C................CA.....A...C.........G.C...A..T..........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-21*01  22   ------------------------------------------------------------------------.......-----------  28

                                      -----CDR3-IMGT-------------------------------->                                  
                                      G  G  P  P  D  R  R  R  F  R  T  Q  Y  F  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7896   271  GGGGTCCCCCCGACAGACGGCGATTTCGGACCCAATATTTTGACTGTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  351
J  95.3% (41/43)    IGHJ4*02     6    --------------------------------------.......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_120558

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           310     1e-86
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GACTGTTAAACCCAAA	CAGTGGCTGG	GGGGACGGTTCTACTCTCG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGACTGTTAAACCCAAACAGTGGCTGGGGGGACGGTTCTACTCTCGCTACGGTATGGACGTC	AKETVKPKQWLGGRFYSRYGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  E  A  T  F  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_7897   1    GGTCCCTGAGACTCTCCTGTGAAGGCTCTGAAGCCACCTTTAGTAGCTATGCCATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.6% (224/250)  IGHV3-23*01  47   .....................C..C.....G.TT.........C.............GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  R  N  G  G  T  A  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7897   91   AGTGGGTTTCGGCTATTAGTCGCAATGGTGGCACTGCATACTACGCAGACTCCGTGAAGGGCCGATTCACCATTTCCAGAGACAATTCCA  180
V  89.6% (224/250)  IGHV3-23*01  137  .......C..A.........G.T.G......T.GCA............................G........C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      M  N  T  V  F  L  H  M  S  S  L  R  P  E  D  T  A  I  Y  Y  C  A  K  E  T  V  K  P  K  Q  
                    Query_7897   181  TGAACACGGTGTTTCTGCACATGAGCAGCCTGAGACCCGAGGACACGGCCATATATTACTGTGCGAAAGAGACTGTTAAACCCAAACAGT  270
V  89.6% (224/250)  IGHV3-23*01  227  A.......C...A......A....A..........G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD6-19*01  9    --------------------------------------------------------------------------------------....  12

                                      --CDR3-IMGT----------------------------->                             
                                      W  L  G  G  R  F  Y  S  R  Y  G  M  D  V  W  G  Q  G  T  T  V  A  V  S
                    Query_7897   271  GGCTGGGGGGACGGTTCTACTCTCGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTC  340
D  100.0% (10/10)   IGHD6-19*01  13   ......----------------------------------------------------------------  18
J  97.8% (44/45)    IGHJ6*02     14   -------------------------.....................................A.......  58


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_120559

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            338     5e-95
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	261	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	27	20	4	3	74.1
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	104	10	0	91.2
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	270	245	22	3	90.7


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  
                    Query_7898   1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCACCTGCATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCC  87
V  90.7% (245/270)  IGHV4-4*02   26   ................T........................GC.........T...TCC......A..AG........GG..........  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  
                    Query_7898   88   GCCAGCCCCCAGGAAAGGGGCTGGAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCA  177
V  90.7% (245/270)  IGHV4-4*02   116  .............G................................T......A................................G...  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  M  S  V  D  K  S  K  N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  
                    Query_7898   178  CCATGTCAGTAGACAAGTCCAAGAATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAG  267
V  90.7% (245/270)  IGHV4-4*02   206  ....A....................CC.GT..........G....GC..........................G................  295
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  

                                      --------CDR3-IMGT-------------->                                
                                      G  R  V  G  S  S  G  W  L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_7898   268  GTCGAGTGGGTAGCAGTGGCTGGCTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  331
D  100.0% (13/13)   IGHD6-19*01  6    ----------.............-----------------------------------------  18
J  95.0% (38/40)    IGHJ4*02     7    ------------------------......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_120554

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7899   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_7899   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_7899   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_7899   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_120555

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           364     5e-103
IGHD2-15*01                                                                                           35.3    4e-06 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GGGGC	TATTGTAGTGGTGGTATGTGCTAC	ACCCCCGT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGGGGCTATTGTAGTGGTGGTATGTGCTACACCCCCGTCTACTACTACTCCGGTATGGACGTC	AKGGYCSGGMCYTPVYYYSGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  P  
                    Query_7900   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCTTCAGTACCTACTGGATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  96.8% (241/249)  IGHV3-74*01  47   ...................................A.........G........................A................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7900   91   TGTGGGTCTCACGTATCAATAGTGATGGGAGTAGCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (241/249)  IGHV3-74*01  137  ................T......................G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  G  Y  C  S  G  G  
                    Query_7900   181  AGAACACCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAAAGGGGGCTATTGTAGTGGTGGTA  270
V  96.8% (241/249)  IGHV3-74*01  227  .......G..........................................................G..---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (22/24)    IGHD2-15*01  5    --------------------------------------------------------------------------................  20

                                      --CDR3-IMGT----------------------------->                                 
                                      M  C  Y  T  P  V  Y  Y  Y  S  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_7900   271  TGTGCTACACCCCCGTCTACTACTACTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  344
D  91.7% (22/24)    IGHD2-15*01  21   GC......------------------------------------------------------------------  28
J  96.6% (56/58)    IGHJ6*02     5    ----------------...........A...................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_120556

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           439     2e-125
IGHD3-16*01                                                                                           12.2    35    
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTTGAGG	GATTAC	CAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTAC	ARSLRDYQPFYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	285	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_7901   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  98.6% (285/289)  IGHV5-51*03  6    .............................................................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_7901   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.6% (285/289)  IGHV5-51*03  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7901   181  GTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACTGC  270
V  98.6% (285/289)  IGHV5-51*03  186  ......................A................................................................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  S  L  R  D  Y  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_7901   271  CATGTATTACTGTGCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  359
V  98.6% (285/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  8    ----------------------------......-------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ------------------------------------------....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_120557

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           349     2e-98
IGHD1-1*01                                                                                            10.3    118  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGCAC	CCAACCCCGATGGCA	ACAAC	CTA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGCACCCAACCCCGATGGCAACAACCTACC	STQPRWQQPT	249	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	253	5	4	1	0	80
Total	N/A	N/A	253	238	15	0	94.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  I  F  S  T  T  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7902   1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCATTTTCAGTACCACCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.1% (238/253)  IGHV3-15*01  47   .......T...............G............C........A.G.........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  I  D  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_7902   91   AGTGGGTTGGCCGTATTAAAAGCAAAATTGATGGTGAGACAACAGACTACGCTGCACCCGTGAAGGGCAGATTCACCATCTCAAGAGATG  180
V  94.1% (238/253)  IGHV3-15*01  137  ...........................C........G...........................A.........................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  E  T  E  D  T  A  L  Y  Y  C  S  T  Q  P  R  W  Q  
                    Query_7902   181  ATTCAAAAAACACGCTGTATTTGCAAATGAACAGCCTGGAAACCGAGGACACAGCCCTTTACTACTGTAGCACCCAACCCCGATGGCAAC  270
V  94.1% (238/253)  IGHV3-15*01  227  ....................C.................A.................G.G..T.......C...-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (5/5)     IGHD1-1*01   4    ----------------------------------------------------------------------------------------..  5

                                      ------->                                  
                                      Q  P  T  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7902   271  AACCTACCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
D  100.0% (5/5)     IGHD1-1*01   6    ...---------------------------------------  8
J  100.0% (36/36)   IGHJ5*02     16   ------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_120550

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           260     1e-71
IGHD2-15*01                                                                                           12.2    34   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTC	ATTGTA	T	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTCATTGTATTACGGTATGGACGTC	ARGVADDGWRGGRRVSLYYGMDV	240	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	125	21	14	7	0	66.7
FR3-IMGT	126	239	114	98	16	0	86
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	205	39	0	84


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  H  C  W  T  W  I  R  Q  T  P  G  K  G  L  E  
                    Query_7903   4    CCCTGAGACTCTCCTGTGCTGTCTATGGTGGGTCCTTTAGTGGTCACTGCTGGACCTGGATTCGCCAGACACCAGGGAAGGGACTGGAAT  93
V  84.0% (205/244)  IGHV4-34*01  50   .....TCC...A....C....................C......T...A.....G......C......C.C...........G.....G.  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  M  N  H  K  G  R  T  T  Y  N  P  S  L  M  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_7903   94   GGATTGGTGAGATGAATCACAAAGGCAGGACGACCTACAACCCGTCGCTAATGAGTCGAGTCACCATCTCAGTGGACACGTCCAAGAATC  183
V  84.0% (205/244)  IGHV4-34*01  140  .......G..A..C.....T.GT..A..C..C.A............C..C.A...............A.....A..............C.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------------CDR3
                                      Q  L  S  L  R  L  T  S  L  I  A  A  D  T  A  M  Y  Y  C  A  R  G  V  A  D  D  G  W  R  G  
                    Query_7903   184  AGCTCTCCCTGAGATTGACCTCTTTAATCGCCGCGGACACGGCTATGTATTACTGTGCGAGAGGCGTGGCGGATGACGGGTGGCGGGGGG  273
V  84.0% (205/244)  IGHV4-34*01  230  ..T.........AGC...G....G.G.C................G...................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          

                                      -IMGT----------------------------->                                 
                                      G  R  R  V  S  L  Y  Y  G  M  D  V  W  G  Q  G  V  T  V  T  V  S  S 
                    Query_7903   274  GCAGACGCGTGTCATTGTATTACGGTATGGACGTCTGGGGCCAGGGAGTCACGGTCACCGTCTCCTCA  341
D  100.0% (6/6)     IGHD2-15*01  6    -------------......-------------------------------------------------  11
J  91.7% (44/48)    IGHJ6*02     15   --------------------.......................A..GAC...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_120551

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           352     3e-99
IGHD5-18*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGTCATGGTTAC	GGAGGAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGTCATGGTTACGGAGGAATTGACTAC	ARYSHGYGGIDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	234	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7904   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (234/243)  IGHV4-59*01  49   ...............................G........G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  K  N 
                    Query_7904   91   TGGATTGGGTATATCTACTACAGTGGGAGCTCCAACTCCAACCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAAGAAC  180
V  96.3% (234/243)  IGHV4-59*01  139  .................T............A......A......................G.............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  I  D 
                    Query_7904   181  CAGTTCTCCCTAAGGCTGAGCTCTGTGACCGCGGCGGACACGGCCGTGTATTACTGTGCGAGATACAGTCATGGTTACGGAGGAATTGAC  270
V  96.3% (234/243)  IGHV4-59*01  229  ...........G.A..................T..............................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  86.7% (13/15)    IGHD5-18*01  6    ---------------------------------------------------------------.....CT........------------  20
J  97.6% (41/42)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_7904   271  TACTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  307
J  97.6% (41/42)    IGHJ4*02     12   ...................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_120552

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           349     2e-98
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	CAGCTA	TACAATTTTTGGAGTGG	ACACATAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACAGCTATACAATTTTTGGAGTGGACACATATTACTTTGACTGG	ANSYTIFGVDTYYFDW	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  S  S  C  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7905   1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCACCTTTAGCAGCTGTGCCATGAGCTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.1% (235/247)  IGHV3-23*01  47   .......................G........................A..............................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  G  T  T  Y  Y  A  D  P  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7905   91   AGTGGGTCTCAAGTATTAGTGGGAGTGGTGGTACGACATACTACGCAGACCCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAACTCCA  180
V  95.1% (235/247)  IGHV3-23*01  137  ...........GC.........T..........GC...............T.............G....................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  N  S  Y  T  I  F  G  V  
                    Query_7905   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAACAGCTATACAATTTTTGGAGTGG  270
V  95.1% (235/247)  IGHV3-23*01  227  .........................................................A.........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.1% (16/17)    IGHD3-3*01   5    -------------------------------------------------------------------------...G.............  21

                                      T------------------>                                  
                                      D  T  Y  Y  F  D  W  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7905   271  ACACATATTACTTTGACTGGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  95.7% (44/46)    IGHJ4*02     3    --------..........AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_120553

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           344     6e-97
IGHD3-10*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCACTC	CTATGGATCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTCCTATGGATCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_7906   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.0% (235/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  A  T  M  S  V  D  T  S 
                    Query_7906   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGCCACCATGTCAGTGGACACGTCT  180
V  94.0% (235/250)  IGHV4-31*03  139  ..................................G................................TT.....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  T  D  T  A  V  F  Y  C  A  R  G  H  S  Y  G  S  G 
                    Query_7906   181  AAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCACGGACACGGCCGTCTTTTACTGCGCGAGAGGTCACTCCTATGGATCGGGG  270
V  94.0% (235/250)  IGHV4-31*03  229  .....................C...G.............G.............G.A......T.......--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.5% (21/22)    IGHD3-10*01  7    -----------------------------------------------------------------------------......T......  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7906   271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  95.5% (21/22)    IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_100462

Length=223
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         174     5e-46
IGHD4-17*01                                                                                           10.3    82   
IGHJ1*01                                                                                              33.4    2e-05


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-17*01	IGHJ1*01	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTCT	ACCA	TACGG	GCCTAA	CCTCG	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	40	11	0	78.4
CDR2-IMGT	146	163	18	15	3	0	83.3
Total	N/A	N/A	163	137	26	0	84


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  E  K  P  G  Q  S  L  R  I  S  C  *  G  S  G  Y  I  F  I  N  *
                    Query_7907     1    GCAGCTGGTGCAGTCTGGAGCAGAAGTGGAAAAGCCCGGGCAGTCTCTGAGGATCTCCTGTTAGGGCTCTGGATACATCTTTATAAATTA  90
V  84.0% (137/163)  IGHV5-10-1*01  6    ........................G...A...........G....................A....T..........G.....CC.GC..  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------>           
                                          C  L  N  W  V  Y  W  M  P  G  R  G  L  E  W  V  G  T  I  N  S  N  D  S  T  I  R  A  *  P
                    Query_7907     91   GTGTTTGAACTGGGTGTACTGGATGCCCGGGAGAGGCCTGGAGTGGGTGGGGACCATTAATTCTAATGACTCTACCATACGGGCCTAACC  180
V  84.0% (137/163)  IGHV5-10-1*01  96   C..GA.C.G.......CG.CA...........A.............A......GG...G..C...G.......-----------------  168
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S                  
D  100.0% (5/5)     IGHD4-17*01    5    -----------------------------------------------------------------------------.....--------  9
J  95.0% (19/20)    IGHJ1*01       33   ----------------------------------------------------------------------------------------..  34

                                                          
                                          R  H  R  L  L   
                    Query_7907     181  TCGTCACCGTCTCCTCAG  198
J  95.0% (19/20)    IGHJ1*01       35   .G................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 20880030


Query= Query_100463

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           330     1e-92
IGHD3-16*01                                                                                           12.2    32   
IGHJ2*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGCCG	TGGGGG	CATCAAGGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGCCGTGGGGGCATCAAGGGATCCTGGTACTCCGATCTC	ARVRRGGIKGSWYSDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7908   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGACATGAGATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-48*03  47   ..............................................TT....A.....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  T  G  S  T  L  I  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_7908   91   AGTGGGTTTCACACATTAGTACTGGTAGTACTCTTATACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACGACGCCG  180
V  92.4% (230/249)  IGHV3-48*03  137  ...........T.........G.A..G...G.ACC...T............................................A.....A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  V  R  R  G  G  I  K  
                    Query_7908   181  AGAATTCTCTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGAGAGTCCGCCGTGGGGGCATCAAGG  270
V  92.4% (230/249)  IGHV3-48*03  227  ....C..A........G.................................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------------......--------  22

                                      T------------------>                                  
                                      G  S  W  Y  S  D  L  W  G  R  S  T  L  V  T  V  S  P  
                    Query_7908   271  GATCCTGGTACTCCGATCTCTGGGGCCGTAGCACCCTGGTCACTGTCTCCCCAG  324
J  94.0% (47/50)    IGHJ2*01     4    ----........T................G....................T...  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_253859

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     4e-93
IGHD2-21*02                                                                                           18.0    0.61 
IGHJ1*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTCACAGTATTGTGGCGC	TGGCGACTGCTA	CGCCTCC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCACAGTATTGTGGCGCTGGCGACTGCTACGCCTCCGCTGAGTACTTCCAGCAC	ARHSQYCGAGDCYASAEYFQH	240	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_7909   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAGT  93
V  93.4% (228/244)  IGHV4-59*08  50   .....TCC...A....C...........................T..........C.................A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N  
                    Query_7909   94   GGATTGGGTATATCTATTCCAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGTTAGACACGTCCAAGAACC  183
V  93.4% (228/244)  IGHV4-59*08  140  ..................A...............C...................................AG..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------------CDR3-IM
                                      H  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  S  Q  Y  C  G  A  G  D  
                    Query_7909   184  ACTTCTCCCTGACCCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATTCACAGTATTGTGGCGCTGGCGACT  273
V  93.4% (228/244)  IGHV4-59*08  230  .G..........AG....G.............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  91.7% (11/12)    IGHD2-21*02  13   ----------------------------------------------------------------------------------...T....  20

                                      GT-------------------------->                                  
                                      C  Y  A  S  A  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7909   274  GCTACGCCTCCGCTGAGTACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  336
D  91.7% (11/12)    IGHD2-21*02  21   ....-----------------------------------------------------------  24
J  96.2% (50/52)    IGHJ1*01     1    -----------.....A.........................................C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_100466

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70D*04                                                                                          369     2e-104
IGHJ6*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70D*04	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGAT	N/A	N/A	N/A	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACACGGATGGACGTC	TRMDV	263	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	45	1	0	97.8
CDR1-IMGT	47	76	30	24	6	0	80
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	106	8	0	93
CDR3-IMGT (germline)	263	270	8	7	1	0	87.5
Total	N/A	N/A	270	253	17	0	93.7


Alignments

                                       <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                         L  V  K  P  T  Q  T  L  T  L  T  C  S  F  S  G  F  S  L  S  T  G  G  M  R  V  S  W  I  R
                    Query_7910    1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCTCCTTCTCTGGGTTCTCACTTTCCACTGGGGGTATGCGTGTGAGTTGGATCCG  90
V  93.7% (253/270)  IGHV2-70D*04  30   .....................................A...................CAG....A.T..A...........C........  119
                                         L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  R  V  S  W  I  R

                                       -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                         Q  P  P  G  K  A  L  E  W  L  A  R  I  D  W  D  D  D  K  F  Y  S  T  S  L  K  T  R  L  T
                    Query_7910    91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACGCATTGATTGGGATGATGATAAATTCTACAGTACATCTCTGAAGACCAGACTCAC  180
V  93.7% (253/270)  IGHV2-70D*04  120  ..................................................................C.................G.....  209
                                         Q  P  P  G  K  A  L  E  W  L  A  R  I  D  W  D  D  D  K  F  Y  S  T  S  L  K  T  R  L  T

                                       ---------------------FR3-IMGT----------------------------------------------------><--CDR3-
                                         I  S  K  D  S  S  K  N  Q  V  V  L  R  L  T  N  M  D  P  A  D  T  A  T  Y  Y  C  T  R  M
                    Query_7910    181  CATCTCCAAGGACTCCTCCAAAAACCAGGTGGTCCTTAGATTGACCAACATGGACCCTGCAGACACAGCCACATATTACTGTACACGGAT  270
V  93.7% (253/270)  IGHV2-70D*04  210  .............A........................C.A..................TG...........G.........G.......  299
                                         I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                       IMGT-->                              
                                         D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_7910    271  GGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  307
J  100.0% (37/37)   IGHJ6*02      23   .....................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_100467

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           332     4e-93
IGHD3-16*01                                                                                           16.1    2.5  
IGHJ3*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCCACGATACTC	ATGCTTAT	TTTGGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCCACGATACTCATGCTTATTTTGGGGCTTTTGATATC	AGHDTHAYFGAFDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	249	37	0	87.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  T  C  K  A  S  G  V  T  F  S  S  F
                    Query_7911   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAGGGTCACCTGCAAGGCTTCTGGAGTCACGTTCAGTAGTTT  90
V  87.1% (249/286)  IGHV1-69*06  6    ..................G...............................A....T..................G...C.....C..C.A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  R  W  V  R  Q  T  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  L  N  T  P  N  Y  A  Q
                    Query_7911   91   TGCTGTTAGATGGGTGCGCCAGACCCCTGGACAAGGGCTCGAGTGGATGGGAGGGATCATCCCCATCCTCAATACGCCAAACTACGCACA  180
V  87.1% (249/286)  IGHV1-69*06  96   ....A.C..C........A...G................T.......................T...T.TGG...AG.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  H  G  R  V  T  I  S  A  D  K  S  T  T  T  V  Y  L  E  L  R  G  L  G  S  H  D  T  A
                    Query_7911   181  GAAGTTCCACGGCAGAGTCACGATTAGCGCGGACAAGTCCACAACCACAGTCTACCTGGAGTTGAGAGGTCTGGGATCTCACGACACGGC  270
V  87.1% (249/286)  IGHV1-69*06  186  .........G................C.........A.....G.G.....C....A.....C....CA.C...A.....G.G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  G  H  D  T  H  A  Y  F  G  A  F  D  I  W  G  P  G  T  R  V  T  V  S  S  
                    Query_7911   271  CGTATATTATTGTGCGGGCCACGATACTCATGCTTATTTTGGGGCTTTTGATATCTGGGGCCCAGGGACAAGGGTCACCGTCTCTTCAG  359
V  87.1% (249/286)  IGHV1-69*06  276  ...G.....C......-------------------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                          
D  100.0% (8/8)     IGHD3-16*01  27   -----------------------------........----------------------------------------------------  34
J  95.7% (44/46)    IGHJ3*02     5    -------------------------------------------...................A........T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_100464

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGTC	GTATTATTTTGATAGTAGTGGT	CAGAGTCCCGCG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGTCGTATTATTTTGATAGTAGTGGTCAGAGTCCCGCGTACTTTGACTAC	ARDLSYYFDSSGQSPAYFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7912   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  C  I  S  G  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7912   91   AGTGGGTCTCATGCATCAGTGGTGGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  ............C...T...A..A..................................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  S  Y  Y  F  D  
                    Query_7912   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGTCGTATTATTTTGATA  270
V  98.4% (246/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (20/22)    IGHD3-22*01  1    ----------------------------------------------------------------------------......C.A.....  14

                                      R3-IMGT------------------------>                                  
                                      S  S  G  Q  S  P  A  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_7912   271  GTAGTGGTCAGAGTCCCGCGTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  336
D  90.9% (20/22)    IGHD3-22*01  15   ........----------------------------------------------------------  22
J  97.8% (45/46)    IGHJ4*02     3    --------------------........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_100465

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           318     5e-89
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	G	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTACGTTATGGACGTC	ARGYVMDV	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  T  H  D  M  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_7913   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTTAGTTTCAGTACCCATGACATGCAGTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-33*01  47   ..................................C.CC.......G.T...G......C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  S  Y  D  G  R  N  K  Y  Y  G  D  S  V  R  G  R  F  S  I  S  R  D  N  S  
                    Query_7913   91   AGTGGGTGGCAATTATTTCGTATGATGGAAGAAATAAATATTATGGAGACTCCGTGAGGGGCCGATTCAGCATCTCCAGAGACAATTCCA  180
V  90.8% (226/249)  IGHV3-33*01  137  ...........G....A.G............T........C....C...........A...........C....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      K  N  A  V  Y  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  R  G  Y  V  M  D  V  W  
                    Query_7913   181  AGAATGCCGTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCCGTCTATTATTGTGCGAGAGGCTACGTTATGGACGTCTGGG  270
V  90.8% (226/249)  IGHV3-33*01  227  ....CA.GC...........................C............T..G.....C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  98.0% (48/49)    IGHJ6*02     14   ----------------------------------------------------------------------.....G..............  33

                                                                   
                                      G  Q  G  T  T  V  T  V  S  S 
                    Query_7913   271  GCCAAGGGACCACGGTCACCGTCTCCTCA  299
J  98.0% (48/49)    IGHJ6*02     34   .............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_253852

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     7e-98
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGCCCCCCGTACCGCATAC	AGCAGTGCCTG	CCACG	GACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGCCCCCCGTACCGCATACAGCAGTGCCTGCCACGGACTGC	ARWPPVPHTAVPATDC	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	232	10	0	95.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  M  S  R  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_7914   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATGAGTAGGTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  95.9% (232/242)  IGHV4-59*01  50   .....TCC...A....C....................C.....T..............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  M  N  
                    Query_7914   94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCATGAACC  183
V  95.9% (232/242)  IGHV4-59*01  140  ....................................................................................A.....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  K  M  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  W  P  P  V  P  H  T  A  V  
                    Query_7914   184  AGTTCTCCCTGAAGATGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGATGGCCCCCCGTACCGCATACAGCAGTGC  273
V  95.9% (232/242)  IGHV4-59*01  230  ..............C.....................................C.........----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  90.9% (10/11)    IGHD6-19*01  7    ----------------------------------------------------------------------------------.......G  14

                                      ------------->                                  
                                      P  A  T  D  C  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_7914   274  CTGCCACGGACTGCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  321
D  90.9% (10/11)    IGHD6-19*01  15   ...---------------------------------------------  17
J  95.0% (38/40)    IGHJ4*02     9    --------....A.......................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_100469

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           372     2e-105
IGHD6-13*01                                                                                           14.1    8.0   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGA	ATAGCAG	GAATC	TTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGAATAGCAGGAATCTTGAATTC	AKNSRNLEF	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	242	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  P  P  G  K  G  L  
                    Query_7915   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  98.4% (242/246)  IGHV3-48*03  47   .......................................................................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  F  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_7915   91   AGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATTCTACGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  98.4% (242/246)  IGHV3-48*03  137  .......................................A...............................A..................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  N  S  R  N  L  E  F  
                    Query_7915   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAAGAATAGCAGGAATCTTGAATTCT  270
V  98.4% (242/246)  IGHV3-48*03  227  ............A.....................................................------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD6-13*01  5    ---------------------------------------------------------------------.......--------------  11
J  95.2% (40/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------....C.A..  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7915   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  95.2% (40/42)    IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_253856

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         386     1e-109
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCTTAAGGTCAATCGCGTC	CAGTGGCTGG	GCGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCA	ARHPLRSIASSGWAS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_7916     1    GCAGCTGGTGCAGTCTGGAGGAGAGGTGAAGAAGCCCGGGGAGTCTTTGAGGATTTCCTGTAAGGCTTCTGGATACACCTTTACCAACTA  90
V  92.7% (268/289)  IGHV5-10-1*01  6    ....................C.........A...............C.......C..........G...........G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  R  Y  S  P
                    Query_7916     91   CTGGATCAGCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGACCCTAGTGACTCTTATACCCGCTACAGTCC  180
V  92.7% (268/289)  IGHV5-10-1*01  96   ......................A.....................................T..................AA......C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  D  G  N  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  M  A  S  D  T  A
                    Query_7916     181  GTCCTTCGACGGCAACGTCACCATCTCAGTTGACAAGTCCATCAGTACTGCCTATTTGCAGTGGAGCAGCCTGATGGCCTCGGACACCGC  270
V  92.7% (268/289)  IGHV5-10-1*01  186  .......C.A...C...............C...............C........CC..................A...............  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          M  Y  Y  C  A  R  H  P  L  R  S  I  A  S  S  G  W  A  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_7916     271  CATGTATTATTGTGCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCATGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  92.7% (268/289)  IGHV5-10-1*01  276  .........C.........-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD6-19*01    9    ------------------------------------------..........--------------------------------------  18
J  100.0% (34/34)   IGHJ4*02       15   ----------------------------------------------------------................................  46

                                          
                                          
                    Query_7916     361  AG  362
J  100.0% (34/34)   IGHJ4*02       47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_253854

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	221	24	6	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_7917   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.0% (221/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_7917   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.0% (221/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_7917   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCCGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.0% (221/251)  IGHV4-34*01  223  ....................GC............C...............T........C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_7917   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_283163

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD6-25*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAGG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTC	ARQSSAGRTRYGMDV	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	295	277	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  
                    Query_7918   4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATTCGACTTTACCG  93
V  93.9% (277/295)  IGHV5-51*01  2    ..G.....................................C.............................T.......A.AG.......A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  V  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_7918   94   ACTACTGGATCGTCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACGAGATACA  183
V  93.9% (277/295)  IGHV5-51*01  92   G...........G..............T......................................................C.......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  G  L  K  A  S  D  
                    Query_7918   184  GTCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACA  273
V  93.9% (277/295)  IGHV5-51*01  182  .C...............................C.............A.......................A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  G  M  Y  F  C  A  R  Q  S  S  A  G  R  T  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_7918   274  CCGGCATGTATTTTTGTGCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCT  363
V  93.9% (277/295)  IGHV5-51*01  272  ...C........AC...........-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD6-25*01  7    --------------------------.......---------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -----------------------------------------------...........................................  57

                                           
                                      S  S 
                    Query_7918   364  CGTCA  368
J  97.9% (47/48)    IGHJ6*02     58   .C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_283162

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           272     2e-75
IGHD6-19*01                                                                                           16.1    2.4  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCAGTATCA	AGTGGCTG	CCATCAGAACTCCCCCTTGG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCAGTATCAAGTGGCTGCCATCAGAACTCCCCCTTGGGACTCC	ARGQYQVAAIRTPPWDS	265	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	150	48	19	2	27	39.6
FR3-IMGT	151	264	114	101	13	0	88.6
CDR3-IMGT (germline)	265	272	8	8	0	0	100
Total	N/A	N/A	272	225	20	27	82.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_7919   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAATTGGATCCGCCAGTCCCCAGGGAAGGGTCTGGAG  90
V  82.7% (225/272)  IGHV4-34*01  49   .......................................................GC............C.............G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-------------------CDR2-IMGT------------------><-----------------------------
                                       W  I  G  E  I  N  H  D  V  G  S  W  E  F  K  N  R  G  S  A  D  Y  N  P  S  L  K  S  R  V 
                    Query_7919   91   TGGATTGGAGAAATCAATCATGATGTAGGCAGCTGGGAATTCAAGAATCGTGGAAGCGCCGACTACAACCCGTCCCTCAAGAGTCGAGTC  180
V  82.7% (225/272)  IGHV4-34*01  139  ........G............A---------------------------........A..A.............................  201
                                       W  I  G  E  I  N  H                             S  G  S  T  N  Y  N  P  S  L  K  S  R  V 

                                      -----------------------FR3-IMGT----------------------------------------------------><-----
                                       T  I  S  L  D  T  S  K  T  Q  F  S  L  R  M  T  S  V  T  P  A  D  T  G  V  Y  Y  C  A  R 
                    Query_7919   181  ACCATTTCCTTGGACACGTCCAAGACCCAGTTCTCCCTGAGAATGACCTCTGTGACCCCCGCGGACACGGGTGTCTATTACTGTGCGAGA  270
V  82.7% (225/272)  IGHV4-34*01  202  .....A..AG.A.............A..............AGC...G..........G............C...G...............  291
                                       T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R 

                                      ---------------CDR3-IMGT-------------------->                                  
                                       G  Q  Y  Q  V  A  A  I  R  T  P  P  W  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_7919   271  GGCCAGTATCAAGTGGCTGCCATCAGAACTCCCCCTTGGGACTCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  349
V  82.7% (225/272)  IGHV4-34*01  292  ..-----------------------------------------------------------------------------  293
                                       G                                                                             
D  100.0% (8/8)     IGHD6-19*01  10   -----------........------------------------------------------------------------  17
J  95.0% (38/40)    IGHJ4*02     9    ---------------------------------------....A..............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_283161

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           350     8e-99
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGAGA	TCGGGGA	AG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGAGATCGGGGAAGACTACTTTAACTAC	ARAEIGEDYFNY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  N  W  I  R  Q  L  P  G  K  G 
                    Query_7920   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAACTGGATCCGCCAGCTCCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*03  49   .............................................................G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  N  Y  Y  S  G  S  S  Y  F  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_7920   91   CTGGAGTGGATTGGCTACAACTATTATAGTGGGAGCTCCTACTTCAACCCGTCCCTCAAAAGTCGAGTTACCATATCATTAGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*03  139  ..............G....T......C.........A......A...............G..................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  E  I  G  E  D  Y 
                    Query_7920   181  AAGAACCAGTTCTCCCTGCAGCTCAGCTCTGTGACTGCCGCGGACTCGGCCGTTTATTACTGTGCGAGAGCCGAGATCGGGGAAGACTAC  270
V  94.8% (237/250)  IGHV4-31*03  229  ..................A....G.....................A.......G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-10*01  14   ----------------------------------------------------------------------------.......-------  20
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  N  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7920   271  TTTAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    ...G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_283160

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     8e-121
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGGACAC	TGTAGTAGTGCCATCTGCGATG	GACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTAC	ARHMGHCSSAICDGPDY	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	69	5	0	93.2
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	111	3	0	97.4
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	283	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  Q  K  P  G  E  A  L  K  I  S  C  K  G  S  G  Y  S  F  G  
                    Query_7921   3    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGCAAAAGCCGGGGGAGGCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCA  92
V  95.9% (283/295)  IGHV5-51*01  2    ....G........G..................A.......C......T......................................AC..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_7921   93   GTTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  182
V  95.9% (283/295)  IGHV5-51*01  92   .C..........G.............................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  
                    Query_7921   183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACA  272
V  95.9% (283/295)  IGHV5-51*01  182  .................................C.........C.................................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  M  Y  Y  C  A  R  H  M  G  H  C  S  S  A  I  C  D  G  P  D  Y  W  G  Q  G  T  L  V  
                    Query_7921   273  CCGCCATGTATTACTGTGCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTACTGGGGCCAGGGAACCCTGGTCA  362
V  95.9% (283/295)  IGHV5-51*01  272  .........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  86.4% (19/22)    IGHD2-2*01   8    -----------------------------------.........A...G....T...---------------------------------  29
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------.............................  36

                                                  
                                      T  V  S  S  
                    Query_7921   363  CCGTCTCCTCAG  374
J  100.0% (41/41)   IGHJ4*02     37   ............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_283167

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           420     7e-120
IGHJ3*01                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	N/A	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GGATGCATCTCTTGGCCACGCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGATGCATCTCTTGGCCACGCGTGCTTTTGATGTC	ARGMHLLATRAFDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  E  A  S  G  Y  T  F  T  S  Y 
                    Query_7922   2    CAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCGAGGCTTCTGGTTACACCTTTACCAGCTAC  91
V  96.5% (279/289)  IGHV1-18*04  7    ...................C........................................A.............................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  D  F  A  Q 
                    Query_7922   92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGGAACACAGACTTTGCACAG  181
V  96.5% (279/289)  IGHV1-18*04  97   .G.....................................................................T......A...A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  V  H  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_7922   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGTCCACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.5% (279/289)  IGHV1-18*04  187  ...C.............................................C.T......................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  G  M  H  L  L  A  T  R  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7922   272  GTGTATTATTGTGCGAGAGGGATGCATCTCTTGGCCACGCGTGCTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTGTCTTCAG  359
V  96.5% (279/289)  IGHV1-18*04  277  ........C..........---------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                       
J  97.9% (46/47)    IGHJ3*01     4    -----------------------------------------.......................................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_283166

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-20*01                                                                                           347     7e-98
IGHD3-10*01                                                                                           10.3    116  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-20*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TGAGGTC	GAGTT	C	GCTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATGAGGTCGAGTTCGCTCTTGATATC	ARDEVEFALDI	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  S  S  G  F  T  F  S  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7923   1    GGTCCCTGAGACTCTCCTGTGCAAGCTCCGGATTCACCTTTAGCGATTATGGCATGAGTTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-20*01  47   .......................GC...T............GAT..............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  N  G  V  N  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7923   91   AGTGGGTCTCTGGTATTAATTGGAATGGAGTTAATACAGGTTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-20*01  137  ............................T.G..GC.......................................................  226
                                      E  W  V  S  G  I  N  W  N  G  G  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  T  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  E  V  E  F  A  L  
                    Query_7923   181  AGAACTCCCTGTATCTGCAAATGACCAGTCTGAGAGCCGAGGACACGGCCTTGTATTACTGTGCGAGGGATGAGGTCGAGTTCGCTCTTG  270
V  94.4% (236/250)  IGHV3-20*01  227  ........................A...............................C..........A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  19   -----------------------------------------------------------------------------.....--------  23
J  93.3% (42/45)    IGHJ3*02     5    -----------------------------------------------------------------------------------...T...  11

                                      ---->                                 
                                      D  I  W  G  Q  G  T  K  V  T  V  S  S 
                    Query_7923   271  ATATCTGGGGCCAAGGGACAAAGGTCACCGTCTCCTCA  308
J  93.3% (42/45)    IGHJ3*02     12   .....................T............T...  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_283165

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           352     3e-99
IGHD5-18*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGTCATGGTTAC	GGAGGAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGTCATGGTTACGGAGGAATTGACTAC	ARYSHGYGGIDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	234	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7924   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (234/243)  IGHV4-59*01  49   ...............................G........G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  S  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  K  N 
                    Query_7924   91   TGGATTGGTTATATCTACTACCGTGGGAGCTCCAACTCCAACCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAAGAAC  180
V  96.3% (234/243)  IGHV4-59*01  139  ........G........T...A........A......A......................G.............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  I  D 
                    Query_7924   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGTCATGGTTACGGAGGAATTGAC  270
V  96.3% (234/243)  IGHV4-59*01  229  .............A.................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  86.7% (13/15)    IGHD5-18*01  6    ---------------------------------------------------------------.....CT........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7924   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_283164

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           299     2e-83
IGHD3-3*01                                                                                            21.8    0.042
IGHJ5*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGATGGGGAAGAG	ACGATTTTTGG	GATGGGGTGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGATGGGGAAGAGACGATTTTTGGGATGGGGTGAGGTTCGACTCT	ARARWGRDDFWDGVRFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	220	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  G  S  G  L  S  L  R  G  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7925   1    GGTCCCTGAGACTCTCCTGTACAGGCTCTGGACTCAGTCTCAGAGGCTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTG  90
V  88.4% (220/249)  IGHV3-48*03  47   ....................G...C.......T...CCT....TA.T...........C.............................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  S  G  S  T  R  H  Y  A  D  S  L  K  G  R  L  T  I  S  R  D  N  A  
                    Query_7925   91   AATGGATTTCATACATCAGTAGTAGCGGCAGTACCAGACATTACGCAGACTCTTTGAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  88.4% (220/249)  IGHV3-48*03  137  .G...G..........T........T..T.......T.T.C............G...........T........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      N  N  S  V  Y  L  Q  M  N  S  L  R  V  A  D  T  A  V  Y  H  C  A  R  A  R  W  G  R  D  D  
                    Query_7925   181  ACAATTCAGTATATCTGCAGATGAACAGCCTGAGAGTCGCGGACACGGCTGTTTATCACTGTGCGAGAGCCCGATGGGGAAGAGACGATT  270
V  88.4% (220/249)  IGHV3-48*03  227  .G..C...C.G........A................C..A................T............---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-3*01   6    ------------------------------------------------------------------------------------......  11

                                      IMGT--------------------->                                  
                                      F  W  D  G  V  R  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_7925   271  TTTGGGATGGGGTGAGGTTCGACTCTTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  330
D  100.0% (11/11)   IGHD3-3*01   12   .....-------------------------------------------------------  16
J  93.3% (42/45)    IGHJ5*01     7    ---------------..........C........A....C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_33905

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-9*01                                                                                            12.2    31   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAG	GACTGG	CTGATTCCTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGACTGGCTGATTCCTTACTACTTTGACTTC	ARAKDWLIPYYFDF	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7926   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*01  49   ........................................................C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  H  S  G  G  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7926   91   TGGATTGGCAATATCTATCACAGTGGGGGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.9% (234/244)  IGHV4-59*01  139  ........GT........T........A..............................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  E  V  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  A  K  D  W  L  I  P  Y  Y 
                    Query_7926   181  CAGTTCTCCCTGGAGGTGAGCTCTGTGACCGCTGCGGACACGGCCATTTATTACTGTGCGAGAGCTAAGGACTGGCTGATTCCTTACTAC  270
V  95.9% (234/244)  IGHV4-59*01  229  ............A..C.............................G.G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-9*01   16   ---------------------------------------------------------------------......---------------  21
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7926   271  TTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    .......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_259069

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           307     1e-85
IGHD2-2*01                                                                                            12.2    30   
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GGGGA	TACCAG	GCAGGTGTG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGGGGATACCAGGCAGGTGTGGACTAC	VGGGYQAGVDY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	99	15	0	86.8
CDR3-IMGT (germline)	240	246	7	5	2	0	71.4
Total	N/A	N/A	246	221	25	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  F  M  T  W  V  R  Q  P  P  G  K  G  L  
                    Query_7927   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACAGTCAGTAGCAACTTCATGACCTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  89.8% (221/246)  IGHV3-53*01  47   ...............................G.....C.............A.....G.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  V  Y  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  T  S  K  
                    Query_7927   91   AGTGGGTCTCAGTTGTTTATGGCGGCGGTAGCACATATTACGCAGACTCCGTGAAGGGACGATTCACCGTCTCGAGAGACACCTCCAAGG  180
V  89.8% (221/246)  IGHV3-53*01  137  ..............A.....A....T...........C....................C.........A....C.......AT......A  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      D  T  V  Y  L  Q  L  N  R  L  R  V  E  D  T  A  V  Y  Y  C  V  G  G  G  Y  Q  A  G  V  D  
                    Query_7927   181  ACACGGTTTATCTTCAATTGAATAGACTGAGAGTCGAAGACACGGCCGTATATTACTGTGTGGGAGGGGGATACCAGGCAGGTGTGGACT  270
V  89.8% (221/246)  IGHV3-53*01  227  .....C.G.........A....C..C.......C...G...........G..........C.A...------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (6/6)     IGHD2-2*01   16   -----------------------------------------------------------------------......-------------  21
J  100.0% (39/39)   IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                 
                                      Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_7927   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  305
J  100.0% (39/39)   IGHJ4*02     13   ...................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_283169

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           324     8e-91
IGHD2-15*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TT	GGATATTGTTTTGGTGG	GAGTTGTTCTGAGGG	CTTAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTGGATATTGTTTTGGTGGGAGTTGTTCTGAGGGCTTAGACTAC	AKVGYCFGGSCSEGLDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  N  F  I  T  Y  G  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_7928   1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCAATTTTATCACTTATGGCATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-23*01  47   .......................G............CC....G..GC....C.....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  D  S  A  S  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  S  
                    Query_7928   91   AGTGGGTCTCAGCTATAAGTGGCAGTGGTGATAGCGCATCCTACGCGGACTCCGTGACGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.6% (228/249)  IGHV3-23*01  137  ................T.....T.......G....A...A......A..........A................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  H  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  V  G  Y  C  F  G  G  
                    Query_7928   181  AAAACACGCTGTATCTGCACATGAACAGCCTGAGACCCGAAGACACGGCCGTATATTATTGTGCGAAAGTTGGATATTGTTTTGGTGGGA  270
V  91.6% (228/249)  IGHV3-23*01  227  .G.................A...............G....G.................C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.2% (15/17)    IGHD2-15*01  2    -----------------------------------------------------------------------.........AG......--  18

                                      GT-------------------->                                  
                                      S  C  S  E  G  L  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_7928   271  GTTGTTCTGAGGGCTTAGACTACTGGGGCCTGGGAACCCTGGTCACCGTGTCCTCAG  327
J  93.2% (41/44)    IGHJ4*02     5    -------------...T.............A..................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_283168

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           318     5e-89
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_7929   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  S  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_7929   91   TGGATTGCGTATTCCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.4% (224/245)  IGHV4-59*02  139  .......G....AT..A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_7929   181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.4% (224/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_7929   271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_33901

Length=317
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     6e-98
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCTAGGAGATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCTAGGAGATCTTGACTAC	ASLGDLDY	238	261	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	232	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  R  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  Q 
                    Query_7930   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCGTTACTTCTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGCAG  90
V  95.9% (232/242)  IGHV4-59*01  49   ..........................................A......A.....G...............................G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  T  S  Q  N 
                    Query_7930   91   TGGATTGGATATATCTCTTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTGGACACGTCCCAGAAC  180
V  95.9% (232/242)  IGHV4-59*01  139  ........G.......A...C..........................................A..........A.........A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------CDR3-IMGT------>         
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  G  D  L  D  Y  W  G  Q 
                    Query_7930   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGTCTAGGAGATCTTGACTACTGGGGCCAG  270
V  95.9% (232/242)  IGHV4-59*01  229  ..............................................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------.................  23

                                                               
                                       G  T  L  V  T  V  S  S  
                    Query_7930   271  GGAACCCTGGTCACCGTCTCCTCAG  295
J  100.0% (42/42)   IGHJ4*02     24   .........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30621390


Query= Query_33900

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD5-12*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGCGGGA	TGGCTAC	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGACAGGTGCGGGATGGCTACCTGACTAC	*QVRDGYLTT	257	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	47	41	40	1	0	97.6
CDR1-IMGT	48	71	24	20	4	0	83.3
FR2-IMGT	72	121	51	43	7	1	84.3
CDR2-IMGT	122	142	21	18	3	0	85.7
FR3-IMGT	143	256	114	110	4	0	96.5
CDR3-IMGT (germline)	257	263	7	5	2	0	71.4
Total	N/A	N/A	258	236	21	1	91.5


Alignments

                                      <---------------FR1-IMGT----------------><-------CDR1-IMGT------><--------------------FR2-
                                         K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  M  S  G  Y  Y  L  N  W  I  R  Q  P   Q 
                    Query_7931   7    TGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTGGTTATTATTTGAACTGGATCCGGCAGCCCC-AG  95
V  91.5% (236/258)  IGHV4-59*01  35   .......T............................................C...A....C..C.G..G.................C..  124
                                         K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  

                                      IMGT---------------------><-----CDR2-IMGT-----><------------------------------------------
                                       G  R  D  W  N  G  L  V  *  S  L  T  A  G  V  P  T  T  T  P  P  S  R  V  E  S  P  Y  Q  * 
                    Query_7931   96   GGAAGGGACTGGAATGGCTTGGTTTGATCTCTTACAGCGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAG  185
V  91.5% (236/258)  IGHV4-59*01  125  .............G...A....G.AT....A......T.....C..............................................  214
                                      G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  

                                      ----------FR3-IMGT----------------------------------------------------><----------CDR3-IMG
                                       T  R  P  T  T  S  S  P  *  S  *  A  L  *  P  L  R  T  R  P  C  I  I  V  *  Q  V  R  D  G 
                    Query_7931   186  ACACGTCCGACAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCCTGTATTATTGTGTGACAGGTGCGGGATGGC  275
V  91.5% (236/258)  IGHV4-59*01  215  ........A.G................................................G.......C....C..G..------------  292
                                      D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R              
D  100.0% (7/7)     IGHD5-12*01  11   --------------------------------------------------------------------------------------....  14

                                      T--------->                                  
                                       Y  L  T  T  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_7931   276  TACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  320
D  100.0% (7/7)     IGHD5-12*01  15   ...------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    ----.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_33903

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           366     2e-103
IGHD5-12*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTC	TATAGTGGCTAC	CAGAAAGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCTATAGTGGCTACCAGAAAGTTTTTGACTCT	EIL*WLPESF*L	285	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	71	71	67	3	1	94.4
CDR1-IMGT	72	95	24	20	4	0	83.3
FR2-IMGT	96	146	51	47	4	0	92.2
CDR2-IMGT	147	170	24	21	3	0	87.5
FR3-IMGT	171	284	114	103	11	0	90.4
CDR3-IMGT (germline)	285	290	6	6	0	0	100
Total	N/A	N/A	290	264	25	1	91


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                        Q  L  G  A  V  W  T  R  G  E  K  A  R  G  V  S  E  D  L  L  S  G  F  W  I  Q  V  F  Q  L
                    Query_7932   1    GCAGCTGGGTGCAGTCTGGACCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAAGTTTTCCAGTT  90
V  91.0% (264/290)  IGHV5-51*01  6    ........-...........G.........................................A...G...........GC...A....C.  94
                                        Q  L   V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                        L  G  R  L  G  A  P  D  A  R  E  R  P  G  V  G  G  N  H  L  S  C  *  L  Y  Y  P  I  Q  S
                    Query_7932   91   ACTGGGTCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGGTGGCAATCATCTATCCTGCTGACTCTACTACCCGATACAGTC  180
V  91.0% (264/290)  IGHV5-51*01  95   .....A.........................................A...GG.............G.......GA....A.......C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                        V  P  P  R  A  G  H  H  L  S  R  Q  V  H  Q  Y  R  L  P  A  V  E  *  P  E  G  L  G  H  R
                    Query_7932   181  CGTCCCTCCAAGGGCGGGTCACCATCTCAGCCGACAAGTCCACCAGTACCGCCTTCCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCG  270
V  91.0% (264/290)  IGHV5-51*01  185  .....T.......C.A..........................T...C.......A............C......................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><--------------CDR3-IMGT-------------->                                  
                                        H  V  L  L  C  E  I  L  *  W  L  P  E  S  F  *  L  L  G  P  G  N  P  G  H  R  L  L   
                    Query_7932   271  CCACGTTTTACTGTGCGAGATTCTATAGTGGCTACCAGAAAGTTTTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  357
V  91.0% (264/290)  IGHV5-51*01  275  ...T..A.............-------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD5-12*01  6    -----------------------............----------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    --------------------------------------------.......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_259068

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD2-15*01                                                                                           21.8    0.041
IGHJ3*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGG	GGATATAGTAGTGG	CTGCTGCCACCGTTC	TTGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGGGATATAGTAGTGGCTGCTGCCACCGTTCTTGCTGTC	ARDQGDIVVAAATVLAV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  G  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_7933   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTGGTTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ......................................C...A...A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  F  Y  S  E  S  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  A  S  K  K 
                    Query_7933   91   TGGATTGGGCATATCTTTTACAGTGAGAGTACCAGCTATAACCCCTCCCTCAAGAGTCGAGTCACTATATCAGTAGACGCGTCCAAGAAG  180
V  93.5% (229/245)  IGHV4-59*01  139  .........T......A........G...C....A...C..........................C............A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  G  D  I  V  V  A  A 
                    Query_7933   181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATCAGGGGGATATAGTAGTGGCTGCT  270
V  93.5% (229/245)  IGHV4-59*01  229  ...................GC..........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD2-15*01  2    -----------------------------------------------------------------------......T.......-----  15

                                      ----------------->                                  
                                       A  T  V  L  A  V  W  G  Q  G  T  K  V  T  V  S  S  
                    Query_7933   271  GCCACCGTTCTTGCTGTCTGGGGCCAAGGGACAAAGGTCACCGTCTCTTCAG  322
J  95.2% (40/42)    IGHJ3*01     9    ----------...A....................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_212965

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TG	ACGATTTTTGGAGTGG	CCCCGTCCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACGATTTTTGGAGTGGCCCCGTCCTTCTTTGACTCC	ARVTIFGVAPSFFDS	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	227	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  H  T  R  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_7934   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCCACACTCGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  93.4% (227/243)  IGHV4-59*01  50   .....TCC...A....C..................AT..G.A..........................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_7934   94   GGATTGGGTATATCCATTACAGTGGGAGCACCAATTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAATC  183
V  93.4% (227/243)  IGHV4-59*01  140  ..............T...................C.....C...............................................C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  H  C  A  R  V  T  I  F  G  V  A  P  S  
                    Query_7934   184  AGTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATCACTGTGCGAGAGTGACGATTTTTGGAGTGGCCCCGTCCT  273
V  93.4% (227/243)  IGHV4-59*01  230  ..............C...................................T............---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (16/16)   IGHD3-3*01   6    -----------------------------------------------------------------................---------  21

                                      ---------->                                  
                                      F  F  D  S  W  A  Q  G  T  L  V  T  V  S  S  
                    Query_7934   274  TCTTTGACTCCTGGGCCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  95.5% (42/44)    IGHJ4*02     5    -........A.....G.............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_212964

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           366     2e-103
IGHD1-1*01                                                                                            12.2    32    
IGHJ4*01                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTAC	AEEKRRVPRGTFHY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7935   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-23*01  47   ................................T.........G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  
                    Query_7935   91   AGTGGGTCTCAGCCATTAGTGGTGGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGA  180
V  96.8% (242/250)  IGHV3-23*01  137  .............T.........A......................................................G.........C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  
                    Query_7935   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGG  270
V  96.8% (242/250)  IGHV3-23*01  227  .................................................................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------------------------......------------  17

                                      ------------->                                  
                                      G  T  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7935   271  GAACCTTTCACTACTGGGGCCAAGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (43/44)    IGHJ4*01     5    ----....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_212967

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           332     3e-93
IGHD1-7*01                                                                                            23.8    0.010
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GACGA	AACTGGAACTAC	GTCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGACGAAACTGGAACTACGTCATTGACCAC	AKGRNWNYVIDH	237	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	111	3	0	97.4
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	232	222	10	0	95.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  N  R  F  G  M  H  W  V  R  Q  G  P  G  K  G  L  E  W  A  A  F  I 
                    Query_7936   12   TGTGCAGCCTCTGGATTCACCTTCAATAGGTTTGGCATGCACTGGGTCCGCCAGGGTCCAGGCAAGGGGCTGGAGTGGGCGGCATTTATA  101
V  95.7% (222/232)  IGHV3-30*18  64   .........................G...C.A.......................C.......................T....G.....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  Y  D  G  S  N  R  N  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_7936   102  TCATATGATGGAAGTAATAGAAACTATGCAGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACCCTGTATCTG  191
V  95.7% (222/232)  IGHV3-30*18  154  ...................A.T.................A........................................G.........  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-------------CDR3-IMGT------------>         
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  R  N  W  N  Y  V  I  D  H  W  G  Q 
                    Query_7936   192  CAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGGACGAAACTGGAACTACGTCATTGACCACTGGGGCCAG  281
V  95.7% (222/232)  IGHV3-30*18  244  ....................................................--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (12/12)   IGHD1-7*01   6    ---------------------------------------------------------............---------------------  17
J  95.2% (40/42)    IGHJ4*02     7    -------------------------------------------------------------------------.....T...........  23

                                                               
                                       G  S  L  V  T  V  S  S  
                    Query_7936   282  GGAAGCCTGGTCACCGTCTCCTCAG  306
J  95.2% (40/42)    IGHJ4*02     24   ....C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_212966

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           352     3e-99
IGHD4-17*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GCCA	TGACTACGGTGAC	AACGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGCCATGACTACGGTGACAACGCCTTTGCTTAC	AKGHDYGDNAFAY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7937   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-23*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  N  I  G  G  T  G  G  N  K  D  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_7937   91   AGTGGGTCTCAAATATTGGAGGTACTGGTGGTAACAAAGACTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  95.2% (237/249)  IGHV3-23*01  137  ...........GC....A.T....G........G..C.T................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  H  D  Y  G  D  N  
                    Query_7937   181  AGAACACGCTCTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAAGGCCATGACTACGGTGACAACG  270
V  95.2% (237/249)  IGHV3-23*01  227  ..........G.........................................A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (13/13)   IGHD4-17*01  1    -------------------------------------------------------------------------.............----  13

                                      ---------->                                  
                                      A  F  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7937   271  CCTTTGCTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  95.5% (42/44)    IGHJ4*02     5    -.....AC.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_212960

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           327     9e-92
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGCG	GGCTGG	G	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCTGGGAACTGGTTCGACCCC	ARGRRAGNWFDP	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  T  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_7938   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAGTGGGACTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  92.0% (229/249)  IGHV4-31*03  50   .....TCC...A............................C.....TGG............C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  G  E  N  T  Q  Y  N  P  S  L  K  S  R  L  T  I  S  G  D  T  S  
                    Query_7938   94   TGGAGTGGATTGGATACATCTATTACGGTGAGAACACCCAGTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGGAGACACGTCTA  183
V  92.0% (229/249)  IGHV4-31*03  140  .............G............A...G..G....T.C........................G............T...........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      T  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  W  
                    Query_7938   184  CGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCTGGGAACTGGT  273
V  92.0% (229/249)  IGHV4-31*03  230  A.................A.................................G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD6-19*01  13   ----------------------------------------------------------------------------......--------  18
J  98.0% (48/49)    IGHJ5*02     3    -----------------------------------------------------------------------------------.......  9

                                      ------->                                  
                                      F  D  P  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_7938   274  TCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  315
J  98.0% (48/49)    IGHJ5*02     10   ...................................T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_212963

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           374     7e-106
IGHD3-3*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	242	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7939   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (242/245)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_7939   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.8% (242/245)  IGHV4-34*01  139  .........................................................................T................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_7939   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  98.8% (242/245)  IGHV4-34*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7939   271  GCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_212962

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           332     3e-93
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	N/A	GGGCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGGGCCCCTACTACGGTCTGGACGTC	AKEGPYYGLDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7940   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACATTCAGTTTCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  92.4% (231/250)  IGHV3-30*18  47   ...............................A.....C......AG.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  L  K  D  G  T  T  K  Y  Y  A  D  S  V  K  G  R  F  T  T  S  R  D  N  P  
                    Query_7940   91   AGTGGGTGGCAGTTATACTAAAGGATGGAACTACTAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCACTTCCAGAGACAATCCCA  180
V  92.4% (231/250)  IGHV3-30*18  137  .................TC.T.T.......G..A......................................TC............T...  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  E  M  S  G  L  R  A  E  D  T  A  M  Y  Y  C  A  K  E  G  P  Y  Y  G  L  
                    Query_7940   181  AGAACACGCTGTATCTGGAAATGAGCGGCCTGAGAGCCGAGGACACGGCTATGTATTACTGTGCGAAAGAGGGCCCCTACTACGGTCTGG  270
V  92.4% (231/250)  IGHV3-30*18  227  .................C......A.A..........T............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
J  98.1% (51/52)    IGHJ6*02     11   ----------------------------------------------------------------------------..........A...  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7940   271  ACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  308
J  98.1% (51/52)    IGHJ6*02     25   ......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_212968

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           349     3e-98
IGHD3-16*01                                                                                           18.0    0.64 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	278	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	277	114	95	13	6	83.3
CDR3-IMGT (germline)	278	283	6	6	0	0	100
Total	N/A	N/A	289	258	25	6	89.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P  R  Y
                    Query_7941   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCCGTTA  90
V  89.3% (258/289)  IGHV5-51*03  6    .......................................................T.....A....T..........GC..TA..A.C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_7941   91   TTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGTCC  180
V  89.3% (258/289)  IGHV5-51*03  96   C........C.......................................................G.....................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D  T  A
                    Query_7941   181  GGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACACTGC  264
V  89.3% (258/289)  IGHV5-51*03  186  .T.....C.A...................C...C........CAGCACC.C...............C..C.................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7941   265  CATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  353
V  89.3% (258/289)  IGHV5-51*03  276  ...G........T......----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD3-16*01  18   --------------------........T...---------------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    ---------------------------------------......T......G.................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_26480

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           324     7e-91
IGHD1-1*01                                                                                            10.3    113  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATAAG	GACGGCGGGCGT	TGGAA	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ATAAGGACGGCGGGCGTTGGAAAC	IRTAGVGN	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	247	5	3	2	0	60
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  S  F  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7942   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGTAGTTTCTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  91.9% (227/247)  IGHV3-74*01  47   ....................................C.........C.A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  S  S  D  G  S  S  R  N  Y  A  D  S  V  K  G  R  V  T  I  S  R  D  N  A  
                    Query_7942   91   TGTGGGTCTCACGTATTAGTAGTGATGGGAGTAGTAGAAACTACGCGGACTCCGTGAAGGGCCGAGTCACCATCTCCAGAGACAACGCCA  180
V  91.9% (227/247)  IGHV3-74*01  137  ..................A...............C.C..G.........................T........................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      K  N  T  V  Y  L  Q  M  N  N  L  R  G  E  D  T  G  V  Y  Y  C  I  R  T  A  G  V  G  N  W  
                    Query_7942   181  AGAACACGGTCTATTTGCAAATGAATAACTTGAGAGGCGAGGACACGGGTGTGTATTATTGTATAAGGACGGCGGGCGTTGGAAACTGGG  270
V  91.9% (227/247)  IGHV3-74*01  227  ........C.G...C..........C.GTC......C...........C.........C...GC...-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD1-1*01   9    -------------------------------------------------------------------------------.....------  13
J  100.0% (36/36)   IGHJ4*02     13   ------------------------------------------------------------------------------------......  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_7942   271  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  300
J  100.0% (36/36)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_26484

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           372     2e-105
IGHD2-2*01                                                                                            23.8    0.011 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAG	TTGTAGTAGTAACACCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGTTGTAGTAGTAACACCTGCTACTACGAAATGGACGTC	ARVSCSSNTCYYEMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	241	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7943   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.8% (241/244)  IGHV4-59*01  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7943   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGGTAGACACGTCCAAGAAC  180
V  98.8% (241/244)  IGHV4-59*01  139  .......................................................................A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  C  S  S  N  T  C  Y 
                    Query_7943   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTAAGTTGTAGTAGTAACACCTGCTAC  270
V  98.8% (241/244)  IGHV4-59*01  229  ...............................................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (16/18)    IGHD2-2*01   7    --------------------------------------------------------------------...........C..G...----  24
J  96.2% (50/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7943   271  TACGAAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  96.2% (50/52)    IGHJ6*02     15   ....GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_26485

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           277     8e-77
IGHD2-2*01                                                                                            12.2    30   
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GGGGA	TACCAG	GCAGGTGTG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGGGGATACCAGGCAGGTGTGGACTAC	VGGGYQAGVDY	237	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	122	21	18	3	0	85.7
FR3-IMGT	123	236	114	98	16	0	86
CDR3-IMGT (germline)	237	243	7	5	2	0	71.4
Total	N/A	N/A	229	203	26	0	88.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  V  S  S  N  F  M  T  W  V  R  Q  P  P  G  K  G  L  E  W  V  S  V  V 
                    Query_7944   15   TGTGCAGCCTCTGGATTCACAGTCAGTAGCAACTTCATGACCTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTGTT  104
V  88.6% (203/229)  IGHV3-53*01  64   ..............G.....C.............A.....G.............G................................A..  153
                                       C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I 

                                      ---CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-----------
                                       Y  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  V  L  R  D  T  S  K  D  T  V  Y  L  Q 
                    Query_7944   105  TATGGCGGCGGTAGCACATATTACGCAGACTCCGTGAAGGGACGATTCACCGTCTTGAGAGACACCTCCAAGGACACGGTTTATCTTCAA  194
V  88.6% (203/229)  IGHV3-53*01  154  ...A....T...........C....................C.........A...CC.......AT......A.....C.G.........  243
                                       Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 

                                      -----------------------------------------><-----------CDR3-IMGT----------->               
                                       L  N  R  L  R  V  E  D  T  A  V  Y  Y  C  V  G  G  G  Y  Q  A  G  V  D  Y  W  G  Q  G  T 
                    Query_7944   195  TTGAATAGACTGAGAGTCGAAGACACGGCCGTATATTACTGTGTGGGAGGGGGATACCAGGCAGGTGTGGACTACTGGGGCCAGGGAACC  284
V  88.6% (203/229)  IGHV3-53*01  244  A....C..C.......C...G...........G..........C.A...-----------------------------------------  292
                                       M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                           
D  100.0% (6/6)     IGHD2-2*01   16   ------------------------------------------------------......------------------------------  21
J  100.0% (39/39)   IGHJ4*02     9    ---------------------------------------------------------------------.....................  29

                                                        
                                       L  V  T  V  S  S 
                    Query_7944   285  CTGGTCACCGTCTCCTCA  302
J  100.0% (39/39)   IGHJ4*02     30   ..................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_26488

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-3*01                                                                                            10.3    118   
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GCTTG	ACGAT	CGCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGCTTGACGATCGCATACTACTTTGACTAC	ATGLTIAYYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_7945   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (242/250)  IGHV4-31*03  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  D  T  S 
                    Query_7945   91   CTAGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTTACCATATCACTAGACACGTCT  180
V  96.8% (242/250)  IGHV4-31*03  139  ..G.......................................................A...................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  D  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  L  T  I  A  Y  Y 
                    Query_7945   181  AAGGACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGCTTGACGATCGCATACTAC  270
V  96.8% (242/250)  IGHV4-31*03  229  ...A...............A.................................G.............G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-3*01   6    ---------------------------------------------------------------------------.....----------  10
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7945   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_26489

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     1e-95
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7946   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  N  Y  Y  G  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_7946   91   TGGATTGGCTATAACTATTACGGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G....T.......A.....A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_7946   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  94.3% (231/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_7946   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_250508

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD6-25*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTC	ARQSSAGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  S  S  G  Y  D  F  L  D  Y
                    Query_7947   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGAGTTCTGGATACGACTTTCTCGACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ..............................A.....C...........................G...........AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_7947   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G.......................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7947   181  GTCATTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGAACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  ...C.........................................C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  M  V  T  V  S  S
                    Query_7947   271  CAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTC  360
V  95.2% (277/291)  IGHV5-51*01  276  ..T..................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------...............................C...............  61

                                       
                                       
                    Query_7947   361  A  361
J  97.9% (47/48)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_250505

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           366     2e-103
IGHD4-17*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CG	TACGGTGACTAC	GTGGGGTATA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGTACGGTGACTACGTGGGGTATATTGACTCG	ARAYGDYVGYIDS	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  G  A  Y  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_7948   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTGGTGCTTACTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (242/250)  IGHV4-31*01  49   ...............................G.................G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  H  Y  S  G  N  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  I  D  T  S 
                    Query_7948   91   CTGGAGTGGATTGGGTTCATCCATTACAGTGGGAACACCTACTACAACCCGTCCCTCAAGAGTCTAGTAACCATATCAATAGACACGTCT  180
V  96.8% (242/250)  IGHV4-31*01  139  ................A....T............G.................................T.........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  Y  G  D  Y  V  G 
                    Query_7948   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCGTACGGTGACTACGTGGGG  270
V  96.8% (242/250)  IGHV4-31*01  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD4-17*01  5    ------------------------------------------------------------------------............------  16

                                      ----------->                                  
                                       Y  I  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7948   271  TATATTGACTCGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.2% (40/42)    IGHJ4*02     7    ----......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_250504

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           420     7e-120
IGHD2-2*01                                                                                            21.8    0.046 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAGTAGTGAA	TACCAGCTGCT	GTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCC	ARSSSEYQLLFWFDP	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_7949   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCAGCTA  90
V  96.5% (279/289)  IGHV5-51*03  6    .................................................................G............C...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_7949   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATATATCCTGGTGACTCTGATGCCAGATATAGTCC  180
V  96.5% (279/289)  IGHV5-51*03  96   .........................................................C..................A.......C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  K  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7949   181  GTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTCAAGGCCTCGGACACCGC  270
V  96.5% (279/289)  IGHV5-51*03  186  .......C.....................C..........................................G.................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  S  S  E  Y  Q  L  L  F  W  F  D  P  W  G  Q  G  T  L  V  T  V  T  S
                    Query_7949   271  CATGTATTATTGTGCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCACCTC  360
V  96.5% (279/289)  IGHV5-51*03  276  .........C.........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (11/11)   IGHD2-2*01   16   -------------------------------...........------------------------------------------------  26
J  97.9% (46/47)    IGHJ5*02     5    ---------------------------------------------........................................T....  49

                                        
                                        
                    Query_7949   361  AG  362
J  97.9% (46/47)    IGHJ5*02     50   ..  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_250507

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           447     8e-128
IGHD5-18*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTATCCTC	TACAGCTATGG	GGAAGATGGA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTATCCTCTACAGCTATGGGGAAGATGGATACGGTATGGACGTC	ARGILYSYGEDGYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	288	2	0	99.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_7950   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  99.3% (288/290)  IGHV1-69*01  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  G  Q
                    Query_7950   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGGACA  180
V  99.3% (288/290)  IGHV1-69*01  96   ......................................................................................C...  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_7950   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  99.3% (288/290)  IGHV1-69*01  186  ..........................................................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  G  I  L  Y  S  Y  G  E  D  G  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_7950   271  CGTGTATTACTGTGCGAGAGGTATCCTCTACAGCTATGGGGAAGATGGATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  99.3% (288/290)  IGHV1-69*01  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (11/11)   IGHD5-18*01  6    ----------------------------...........---------------------------------------------------  16
J  100.0% (48/48)   IGHJ6*02     15   -------------------------------------------------.........................................  55

                                             
                                        S  S 
                    Query_7950   361  CTCCTCA  367
J  100.0% (48/48)   IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_250506

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD1-26*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCACTGC	GAGCTACT	CT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGCACTGCGAGCTACTCTTTTGACTAC	ARDRTASYSFDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  Y  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_7951   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAATTATTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  90.6% (221/244)  IGHV4-59*01  50   .....TCC...A....C......................G.AG............C..................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  V  F  Y  N  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  T  D  N  
                    Query_7951   94   GGATTGGATATGTCTTTTACAATGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGTTAGACACGACCGACAACC  183
V  90.6% (221/244)  IGHV4-59*01  140  .......G...A...A.....G.....G..........................................AG........T..A.G....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  K  L  N  S  V  T  T  A  D  T  A  V  Y  Y  C  A  R  D  R  T  A  S  Y  S  F  D  
                    Query_7951   184  AGTTCTCCCTAAAACTGAACTCTGTGACCACTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGCACTGCGAGCTACTCTTTTGACT  273
V  90.6% (221/244)  IGHV4-59*01  230  ..........G..G....G..........G..................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD1-26*01  11   -------------------------------------------------------------------------........---------  18
J  100.0% (43/43)   IGHJ4*02     6    -----------------------------------------------------------------------------------.......  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7951   274  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (43/43)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_250503

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           372     2e-105
IGHD3-16*01                                                                                           18.0    0.64  
IGHJ3*01                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	278	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	277	114	95	13	6	83.3
CDR3-IMGT (germline)	278	284	7	7	0	0	100
Total	N/A	N/A	290	266	18	6	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_7952   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTA  90
V  91.7% (266/290)  IGHV5-51*01  6    ..................................................A...................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_7952   91   CTGGATCTCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGTCC  180
V  91.7% (266/290)  IGHV5-51*01  96   .......GG........................................................G.....................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D  T  A
                    Query_7952   181  GGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACACTGC  264
V  91.7% (266/290)  IGHV5-51*01  186  .T.....C.A...................C...C........CAGCACC.C...............C..C.................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7952   265  CATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  353
V  91.7% (266/290)  IGHV5-51*01  276  ...G........T.......---------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD3-16*01  18   --------------------........T...---------------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    ---------------------------------------......T......G.................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_188175

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         304     1e-84
IGHD2-21*02                                                                                           31.5    5e-05
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGTTCCACATA	ATTGTGCTGGTGGCTGCTATTC	AG	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTTCCACATAATTGTGCTGGTGGCTGCTATTCAGACTGCTTTGACTCC	ARGVPHNCAGGCYSDCFDS	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	220	26	0	89.4


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  S  S  I  T  S  S  Y  Y  W  G  W  I  R  Q  S  P  G  K  G  L 
                    Query_7953     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTCTTCCATCACCAGTTCTTACTACTGGGGCTGGATCCGGCAGTCCCCAGGGAAGGGGCTG  90
V  89.4% (220/246)  IGHV4-38-2*01  49   ...............................AC.......G....GG.........................C.................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  D  A  S  H  G  G  S  T  H  F  N  P  S  L  R  G  R  V  T  I  S  L  H  T  S  R 
                    Query_7953     91   GAGTGGATTGGCGATGCCTCTCATGGTGGGAGCACCCACTTCAACCCGTCCCTAAGGGGTCGAGTCACCATATCACTGCACACGTCCAGG  180
V  89.4% (220/246)  IGHV4-38-2*01  139  ...........GAG.AT..A....A...........T...A............C.A.A.................G.AG.........A.  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                         N  Q  F  S  L  N  V  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  V  P  H  N  C  A  G 
                    Query_7953     181  AACCAGTTCTCCCTGAACGTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAGAGGGGTTCCACATAATTGTGCTGGT  270
V  89.4% (220/246)  IGHV4-38-2*01  229  .................GC...G................................A..........------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  90.9% (20/22)    IGHD2-21*02    6    -------------------------------------------------------------------------------......G....  16

                                        MGT----------------------->                                  
                                         G  C  Y  S  D  C  F  D  S  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_7953     271  GGCTGCTATTCAGACTGCTTTGACTCCTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  331
D  90.9% (20/22)    IGHD2-21*02    17   .A.........--------------------------------------------------  27
J  93.8% (45/48)    IGHJ4*02       1    -------------...A........A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_315279

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-10*01                                                                                           10.3    115  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGCCGTCA	GGGGA	CC	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGCCGTCAGGGGACCGGTTCGACCCC	ARWPSGDRFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  P  Y  Y  W  G  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_7954   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGACCTTACTACTGGGGCTGGATCCGGCAGACCCCGGGGAAGGGACTGGAG  90
V  93.8% (228/243)  IGHV4-59*01  49   .........................................TAG..........A..............C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  P  K  N 
                    Query_7954   91   TGGATTGGGTATATCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGCCCAAGAAC  180
V  93.8% (228/243)  IGHV4-59*01  139  ...............T.................................................................T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  R  V  T  S  M  N  A  A  D  T  A  V  Y  Y  C  A  R  W  P  S  G  D  R  F  D  P 
                    Query_7954   181  CAGTTCTCCCTCAGGGTGACCTCTATGAACGCTGCGGACACGGCCGTTTATTACTGTGCGAGATGGCCGTCAGGGGACCGGTTCGACCCC  270
V  93.8% (228/243)  IGHV4-59*01  229  ...........G.A.C...G....G...C..................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-10*01  16   ------------------------------------------------------------------------.....-------------  20
J  100.0% (45/45)   IGHJ5*02     7    -------------------------------------------------------------------------------...........  17

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7954   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (45/45)   IGHJ5*02     18   ..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_206321

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_7955   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_7955   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_7955   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_7955   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_51398

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           349     2e-98
IGHD2-2*01                                                                                            27.6    8e-04
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAACT	TATTGTACTAGTACCACCTG	TTCTAAT	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAACTTATTGTACTAGTACCACCTGTTCTAATTACGACGGTATGGACGTC	ARGTYCTSTTCSNYDGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  V  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7956   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTACTTATGCCGTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  95.1% (235/247)  IGHV3-33*01  47   .............................................GC....G.A...............................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  Y  Y  D  G  S  N  K  Y  Y  A  G  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7956   91   AGTGGGTGGCATTCATATACTATGATGGAAGTAATAAATACTATGCAGGCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.1% (235/247)  IGHV3-33*01  137  ...........G.T....GG............................A.........................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  T  Y  C  T  S  T  
                    Query_7956   181  AGAACACGCTGTATCTGCAAATGAGCAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGGGGAACTTATTGTACTAGTACCA  270
V  95.1% (235/247)  IGHV3-33*01  227  ........................A...........................G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.0% (18/20)    IGHD2-2*01   5    --------------------------------------------------------------------------.......G........  20

                                      -IMGT----------------------->                                 
                                      T  C  S  N  Y  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7956   271  CCTGTTCTAATTACGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  90.0% (18/20)    IGHD2-2*01   21   G...----------------------------------------------------------  24
J  98.0% (50/51)    IGHJ6*02     12   -----------...T...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_315271

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGCCGG	AGTAGTGGTTATTACT	CTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGCCGGAGTAGTGGTTATTACTCTTACTACTTTGACTAC	ARGRRSSGYYSYYFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	243	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7957   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.6% (243/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7957   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  99.6% (243/244)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  S  S  G  Y  Y  S 
                    Query_7957   181  CAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGTCGCCGGAGTAGTGGTTATTACTCT  270
V  99.6% (243/244)  IGHV4-59*01  229  ...................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (16/16)   IGHD3-22*01  14   ------------------------------------------------------------------------................--  29

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7957   271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_187930

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           428     3e-122
IGHD1-20*01                                                                                           21.8    0.047 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTAAGACAGGGGTCACA	ATAACTGGAAC	AACTTGGGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAAGACAGGGGTCACAATAACTGGAACAACTTGGGGGTACTTTGACTAC	ARLKTGVTITGTTWGYFDY	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	282	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  N  Y
                    Query_7958   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATATAGTTTTAGCAACTA  90
V  97.2% (282/290)  IGHV5-51*01  6    ...........................................................................C..C....C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_7958   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  97.2% (282/290)  IGHV5-51*01  96   ...................................................G............................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7958   181  GTCCTTCCAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.2% (282/290)  IGHV5-51*01  186  ........................C...................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  L  K  T  G  V  T  I  T  G  T  T  W  G  Y  F  D  Y  W  G  Q  G  T  L  V
                    Query_7958   271  CATGTATTACTGTGCGAGACTTAAGACAGGGGTCACAATAACTGGAACAACTTGGGGGTACTTTGACTACTGGGGCCAGGGAACCCTGGT  360
V  97.2% (282/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (11/11)   IGHD1-20*01  4    -------------------------------------...........------------------------------------------  14
J  97.8% (45/46)    IGHJ4*02     3    ----------------------------------------------------------................................  34

                                                    
                                        T  V  S  S  
                    Query_7958   361  CACCGTTTCCTCAG  374
J  97.8% (45/46)    IGHJ4*02     35   ......C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_315270

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           330     1e-92
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  A  L  E 
                    Query_7959   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGCACTGGAG  90
V  93.1% (228/245)  IGHV4-59*08  49   ...........................................G......................................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  F  Y  T  G  T  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7959   91   TGGATCGGGTCTATCTTTTACACTGGGACCACCAACTACGACCCCTCTCTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGAAC  180
V  93.1% (228/245)  IGHV4-59*08  139  .....T....A.....A.....G.....G..........A.......C....................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  V  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  H  R  A  A  A  G  P 
                    Query_7959   181  CAGTTCTCCCTGAGAGTGACCTCTCTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATCCCCATAGAGCAGCAGCTGGCCCC  270
V  93.1% (228/245)  IGHV4-59*08  229  .............AGC...G....G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD6-13*01  7    --------------------------------------------------------------------------............----  18
J  93.2% (41/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_7959   271  TTTGACAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  313
J  93.2% (41/44)    IGHJ4*02     6    ......T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_180736

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGATGGCCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTC	VRQSSDGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  S  Y
                    Query_7960   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCAGTTA  90
V  95.5% (278/291)  IGHV5-51*01  6    ....................................C.......................................AG.........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  T  G  L  E  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  S  P
                    Query_7960   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGTGGATGGGGATCATCTTTCCGGATGACTCTGATACCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ................................A..........................A...T.G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7960   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  ............................................G.....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                           
                                        K  Y  Y  C  V  R  Q  S  S  D  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_7960   271  CAAGTATTATTGTGTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  355
V  95.5% (278/291)  IGHV5-51*01  276  ..T......C....C......----------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                   
J  100.0% (42/42)   IGHJ6*02     15   -------------------------------------------..........................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_225699

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           313     1e-87
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGACTAG	TGGAACGAC	TCTTGTGT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGACTAGTGGAACGACTCTTGTGTACTGGTTCGACCCC	ARTSGTTLVYWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	220	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  N  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  Q  L  E 
                    Query_7961   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAATACCTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAACAACTGGAG  90
V  91.7% (220/240)  IGHV4-59*08  49   ..................A.....................G..GT...................................GGG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  T  T  Y  S  P  S  L  K  S  R  V  T  M  S  I  D  T  S  K  N 
                    Query_7961   91   TGGATTGGTTATATCTCTTACAGTGGGAGCACCACTTATAGCCCCTCCCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCCAAGAAC  180
V  91.7% (220/240)  IGHV4-59*08  139  ........G.......A.................AC..C.A...........................A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  T  S  G  T  T  L  V  Y  W 
                    Query_7961   181  CAGTTCTCCCTGAGGCTGACGTCTGTGACCGCCGCAGACACGGCCATTTATTACTGTGCGCGGACTAGTGGAACGACTCTTGTGTACTGG  270
V  91.7% (220/240)  IGHV4-59*08  229  .............A.....GC........................G.G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD1-1*01   9    --------------------------------------------------------------------.........-------------  17
J  95.8% (46/48)    IGHJ5*02     4    -------------------------------------------------------------------------------------.....  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  I  L  V  A  V  S  S  
                    Query_7961   271  TTCGACCCCTGGGGCCAGGGAATCCTGGTCGCCGTCTCCTCAG  313
J  95.8% (46/48)    IGHJ5*02     9    ......................C.......A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_180734

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAGGG	AGTAGTGGTTATT	TTAGCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAGGGAGTAGTGGTTATTTTAGCCTC	ARRGSSGYFSL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  K  G  S  D  F  S  F  A  R  N
                    Query_7962   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGATTTCAGTTTTGCCAGGAA  90
V  94.8% (275/290)  IGHV5-51*01  6    ..........................................G............................GA.A...C...A....CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  H  D  S  D  T  R  Y  S  P
                    Query_7962   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTAGAGTGGATGGGGAACATCTATCCTCATGACTCTGATACCAGATACAGCCC  180
V  94.8% (275/290)  IGHV5-51*01  96   .......................................G.............T..........GG........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  T  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_7962   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (275/290)  IGHV5-51*01  186  ...................................A.................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        M  Y  Y  C  A  R  R  G  S  S  G  Y  F  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7962   271  CATGTATTATTGTGCGAGACGAGGGAGTAGTGGTTATTTTAGCCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  94.8% (275/290)  IGHV5-51*01  276  .........C..........------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (13/13)   IGHD3-22*01  14   -------------------------.............------------------------------------------  26
J  100.0% (35/35)   IGHJ4*02     14   ---------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_180730

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            347     7e-98
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTACT	AGGCTATTGTAGCAGTACCAACTGCT	TTTCCCTCCCAGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTACTAGGCTATTGTAGCAGTACCAACTGCTTTTCCCTCCCAGCCTTTGACTAC	ARLLGYCSSTNCFSLPAFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  Y  S  F  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_7963  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTATAGTTTCTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-7*03  47   .......................................T....AG............C...............................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  S  I  K  Q  D  G  T  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7963  91   AGTGGGTGGCCAGCATTAAGCAAGATGGAACTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  94.8% (235/248)  IGHV3-7*03  137  ............A...A.............G......................................................C....  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------------CD
                                     K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  L  L  G  Y  C  S  S  
                    Query_7963  181  AGAATTCATTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGCGCGAGACTACTAGGCTATTGTAGCAGTA  270
V  94.8% (235/248)  IGHV3-7*03  227  ....C...C...A.......................................G........T......----------------------  294
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.5% (23/26)    IGHD2-2*01  1    -------------------------------------------------------------------------...A........T....  17

                                     R3-IMGT------------------------>                                  
                                     T  N  C  F  S  L  P  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7963  271  CCAACTGCTTTTCCCTCCCAGCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  88.5% (23/26)    IGHD2-2*01  18   ...G.....---------------------------------------------------------  26
J  100.0% (44/44)   IGHJ4*02    5    ----------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_180731

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         335     4e-94
IGHD6-19*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	GG	GCAGTGGCTGG	GC	CTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGGGAGGGCAGTGGCTGGGCCTTGGACTAC	TREGSGWALDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  N  A  M  H  W  V  R  Q  A  P  G  K  G  P  
                    Query_7964     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAACAATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCCGG  90
V  92.8% (232/250)  IGHV3-30-3*01  47   .............................................G.T.......................................T..  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  A  I  S  N  D  G  T  K  N  Y  Y  A  D  S  V  K  G  R  V  T  I  S  R  D  N  S  
                    Query_7964     91   AGTGGGTGGCAGCGATATCAAATGATGGAACCAAGAACTACTACGCAGACTCCGTGAAGGGCCGAGTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-30-3*01  137  ............TT......T.........G...T..A...........................T........................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                        K  S  T  L  H  L  Q  M  N  T  L  R  P  E  D  T  A  V  Y  H  C  T  R  E  G  S  G  W  A  L  
                    Query_7964     181  AGAGTACGCTGCATCTGCAAATGAACACCCTGAGACCTGAGGACACGGCTGTGTATCACTGTACGAGGGAGGGCAGTGGCTGGGCCTTGG  270
V  92.8% (232/250)  IGHV3-30-3*01  227  ...AC......T...............G.......G....................T.....G....A..--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-19*01    8    ------------------------------------------------------------------------...........-------  18
J  95.0% (38/40)    IGHJ4*02       5    -------------------------------------------------------------------------------------...T.  9

                                        ---->                              
                                        D  Y  W  G  Q  G  A  L  V  T  V  S 
                    Query_7964     271  ACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCC  305
J  95.0% (38/40)    IGHJ4*02       10   .................A.................  44


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_134717

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_7965   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_7965   91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_7965   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_7965   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_134716

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           269     2e-74
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGGGCAAG	ATAGTAGTGGCTGG	GGCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGAAGGGCAAGATAGTAGTGGCTGGGGCTACTACTTTGACACC	VREGQDSSGWGYYFDT	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	23	7	0	76.7
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	97	17	0	85.1
CDR3-IMGT (germline)	246	253	8	6	2	0	75
Total	N/A	N/A	250	211	39	0	84.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  G  S  V  N  S  G  F  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_7966   4    CCCTGAGACTCTCCTGCAGTGTCTCTGGTGGGTCCGTCAATAGTGGTTTTTATTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  84.4% (211/250)  IGHV4-61*01  50   .....TCC...A......C............C.......GC......AG...C..C..................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  D  W  I  G  N  V  Y  A  T  G  R  T  K  L  K  S  S  L  P  S  R  V  S  M  S  V  D  K  A  
                    Query_7966   94   TGGACTGGATTGGCAATGTCTATGCCACTGGGAGAACCAAATTGAAGTCCTCCCTCCCGAGTCGAGTCAGCATGTCCGTAGACAAGGCCA  183
V  84.4% (211/250)  IGHV4-61*01  140  ....G........GT..A.....TA..G......C.....C.AC..CC........AA...........C...A..A.......C.T...  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  L  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  V  R  E  G  Q  D  S  S  G  
                    Query_7966   184  AGAACCTGTTCTCCCTGAAACTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTTTTGTGTGCGAGAAGGGCAAGATAGTAGTGGCT  273
V  84.4% (211/250)  IGHV4-61*01  230  ......A............G....G................................AC....C.A....--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  92.9% (13/14)    IGHD6-19*01  5    ------------------------------------------------------------------------------....C.......  16

                                      T------------------>                                  
                                      W  G  Y  Y  F  D  T  W  G  P  G  T  L  V  T  V  S  S  
                    Query_7966   274  GGGGCTACTACTTTGACACCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  327
D  92.9% (13/14)    IGHD6-19*01  17   ..----------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*02     1    ------...........TA........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_134715

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD2-2*01                                                                                            23.8    0.011 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAG	TTGTAGTAGTAACACCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGTTGTAGTAGTAACACCTGCTACTACGAAATGGACGTC	ARVSCSSNTCYYEMDV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	235	8	0	96.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_7967   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  96.7% (235/243)  IGHV4-59*01  50   .....TCC...A..................G...........................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  P  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_7967   94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCCCAAGAGTCGAGTCACCATATCGGTAGACACGTCCAAGAACC  183
V  96.7% (235/243)  IGHV4-59*01  140  ................................................T.....................A...................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  C  S  S  N  T  C  Y  
                    Query_7967   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTAAGTTGTAGTAGTAACACCTGCTACT  273
V  96.7% (235/243)  IGHV4-59*01  230  ..............................................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  88.9% (16/18)    IGHD2-2*01   7    -------------------------------------------------------------------...........C..G...-----  24
J  96.2% (50/52)    IGHJ6*02     11   -------------------------------------------------------------------------------------.....  15

                                      ------------->                                 
                                      Y  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7967   274  ACGAAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  96.2% (50/52)    IGHJ6*02     16   ...GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_134714

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           406     1e-115
IGHD3-10*01                                                                                           12.2    37    
IGHJ2*01                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGACCGCAGAGATGGCAAAA	TTCGGG	TG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGACCGCAGAGATGGCAAAATTCGGGTGTACTGGTACTTCGGTCTC	ARGDRRDGKIRVYWYFGL	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_7968   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCAGGAGGCACCTTCAGCAGCTA  90
V  94.8% (275/290)  IGHV1-69*06  6    ..................G..................................................T....................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  V  P  V  L  R  T  A  N  Y  A  Q
                    Query_7968   91   TGTTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGGGGATCGTCCCTGTCCTTCGTACAGCGAACTACGCACA  180
V  94.8% (275/290)  IGHV1-69*06  96   ..C.....G..........................................A......A.....A..T..G.......A...........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  T  A  D  K  S  R  G  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_7968   181  GAAGTTCCAGGACAGAGTCACGATTACCGCGGACAAATCCAGGGGTACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  94.8% (275/290)  IGHV1-69*06  186  ...........G.............................C.A.C....C.......................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  G  D  R  R  D  G  K  I  R  V  Y  W  Y  F  G  L  W  G  R  G  T  L  V  T
                    Query_7968   271  CGTGTATTACTGTGCGAGAGGAGACCGCAGAGATGGCAAAATTCGGGTGTACTGGTACTTCGGTCTCTGGGGCCGTGGCACCCTGGTCAC  360
V  94.8% (275/290)  IGHV1-69*06  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-10*01  13   -----------------------------------------......-------------------------------------------  18
J  96.2% (50/52)    IGHJ2*01     2    -------------------------------------------------.............A...........................  42

                                                 
                                        V  S  S  
                    Query_7968   361  CGTCTCCTCAG  371
J  96.2% (50/52)    IGHJ2*01     43   T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_134713

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            414     5e-118
IGHD6-19*01                                                                                           27.6    8e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GAAGAG	ATAGCAGTGGCTGG	CTCGTCA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGAAGAGATAGCAGTGGCTGGCTCGTCAACTTTGACTAC	ARGRDSSGWLVNFDY	273	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	29	1	0	96.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	26	1	0	96.3
FR3-IMGT	159	272	114	109	5	0	95.6
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	272	7	0	97.5


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  T  S  A  A  W  N  W  
                    Query_7969   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCACCAGTGCTGCTTGGAACTGGA  90
V  97.5% (272/279)  IGHV6-1*01   26   .....................................................................A....................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  H  N  D  Y  A  I  S  V  K  
                    Query_7969   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGCATAATGATTATGCAATATCTGTCAAAA  180
V  97.5% (272/279)  IGHV6-1*01   116  ..............................................................T..............G.......G....  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  N  I  N  P  D  T  P  K  N  Q  F  S  L  H  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_7969   181  GTCGAATAAACATCAACCCAGACACACCCAAGAACCAGTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  97.5% (272/279)  IGHV6-1*01   206  .........C................T......................G........................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-----------------CDR3-IMGT----------------->                                
                                      C  A  R  G  R  D  S  S  G  W  L  V  N  F  D  Y  W  G  Q  G  T  L  A  T  V  S  S
                    Query_7969   271  GTGCAAGAGGAAGAGATAGCAGTGGCTGGCTCGTCAACTTTGACTACTGGGGCCAGGGAACCCTGGCCACCGTCTCCTC  349
V  97.5% (272/279)  IGHV6-1*01   296  .........----------------------------------------------------------------------  304
                                      C  A  R                                                                        
D  100.0% (14/14)   IGHD6-19*01  5    ---------------..............--------------------------------------------------  18
J  97.7% (42/43)    IGHJ4*02     4    ------------------------------------..............................T............  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_134711

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           358     4e-101
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GCAATTTTCT	TAGTAGAGGTTAT	CCCGGAGAGGATTCCGAGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGCAATTTTCTTAGTAGAGGTTATCCCGGAGAGGATTCCGAGCTTGACTAT	AKGNFLSRGYPGEDSELDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  F  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_7970   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTTTGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-30*18  47   .............................................G..A..G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  D  G  T  N  K  Y  Y  T  D  S  V  K  G  Q  F  T  I  S  R  D  N  S  
                    Query_7970   91   AGTGGGTGGCACTTATATCATATGATGGAACTAATAAATACTATACAGACTCCGTGAAGGGCCAATTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (239/249)  IGHV3-30*18  137  ...........G..................G.............G..................G..........................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  G  N  F  L  S  R  G  
                    Query_7970   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTTGAGGACACGGCTGTCTATTATTGTGCGAAAGGCAATTTTCTTAGTAGAGGTT  270
V  96.0% (239/249)  IGHV3-30*18  227  ....................................C...............G.....C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.3% (12/13)    IGHD3-22*01  13   -------------------------------------------------------------------------------......T....  23

                                      -IMGT----------------------->                                  
                                      Y  P  G  E  D  S  E  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7970   271  ATCCCGGAGAGGATTCCGAGCTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  92.3% (12/13)    IGHD3-22*01  24   ..-------------------------------------------------------------  25
J  97.6% (41/42)    IGHJ4*02     7    ---------------------.......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_180739

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTATTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  N  H  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7971   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTAATCACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (222/245)  IGHV4-59*01  49   .......................................AG..G.T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  S  H  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  T  A  D  K  S  K  N 
                    Query_7971   91   TGGATTGCCTATATCTCTCACAGTGGGGGCACCAATTACAACCGCTCCCTCAAGAGTCGAGTCACCATAACAGCGGACAAGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  .......GG.......A.T........A.......C.......C.........................T...TA....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_7971   181  CAGTTTTCCCTGAAGGTGAGATCTGTGACCGCCGCGGACACGGCCGTATATTATTGTGCCAGAGAGGCCTACTCTTATTACGGTATGGAC  270
V  90.6% (222/245)  IGHV4-59*01  229  .....C.........C....C...........T..............G.....C.....G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  89.7% (52/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC..C............  26

                                      -->                                 
                                       V  W  G  Q  G  P  T  V  I  V  S  S 
                    Query_7971   271  GTCTGGGGCCAGGGGCCCACGGTCATCGTCTCCTCA  306
J  89.7% (52/58)    IGHJ6*02     27   ...........A...A.........C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_232749

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           27.6    8e-04
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGGGGA	AGCAGTGGCTGGTA	GATATTCAGGAA	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGGGGAAGCAGTGGCTGGTAGATATTCAGGAATACGACTACTATGGTATGGACGTC	ARWGKQWLVDIQEYDYYGMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  *  F  A  F  G  D  Y  S  M  N  W  V  R  Q  A  P  G  T  G  L  
                    Query_7972   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTTGATTCGCCTTCGGTGATTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGACGGGGCTGG  90
V  91.1% (226/248)  IGHV3-21*01  47   .....................C.......G.....A.....A..AGC..................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  L  T  S  Y  Y  T  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7972   91   AGTGGGTCTCATCTATTAGTCTTACTAGTTATTACACATACTACGCGGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.1% (226/248)  IGHV3-21*01  137  .............C......AG..G....AG.....T.........A......G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  W  G  K  Q  W  L  V  
                    Query_7972   181  AGAATACACTGTATCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCGGTTTATTACTGTGCGAGATGGGGGAAGCAGTGGCTGGTAG  270
V  91.1% (226/248)  IGHV3-21*01  227  ....CT...................C.......................T..G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD6-19*01  7    ---------------------------------------------------------------------------..............-  20

                                      DR3-IMGT-------------------------->                                 
                                      D  I  Q  E  Y  D  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7972   271  ATATTCAGGAATACGACTACTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  338
J  94.7% (54/57)    IGHJ6*02     6    -----------...T.......C.........................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_232748

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         386     1e-109
IGHD4-4*01                                                                                            14.1    9.4   
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-4*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATAGAGAC	GACTATAGTA	CGTCGTCCTC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAGAGACGACTATAGTACGTCGTCCTCCGACCCC	ARHRDDYSTSSSDP	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  A  N  H
                    Query_7973     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCAGGATACAGCTTTGCTAATCA  90
V  92.7% (268/289)  IGHV5-10-1*01  6    .....................................................................T............A.C.GCT.  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  M  L  D  P  S  D  S  Y  S  N  Y  S  P
                    Query_7973     91   CTGGATCACCTGGGTCCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGATGCTTGATCCCAGTGACTCTTATAGCAACTACAGTCC  180
V  92.7% (268/289)  IGHV5-10-1*01  96   ........G......G......A..............................G.A.......T.............C.........C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  F  S  A  D  K  T  I  N  T  A  Y  L  H  W  S  S  L  K  A  S  D  P  A
                    Query_7973     181  GTCCTTCCAAGGCCACGTCACCTTCTCAGCTGACAAGACCATCAACACTGCCTACCTACATTGGAGCAGCCTGAAGGCCTCGGACCCCGC  270
V  92.7% (268/289)  IGHV5-10-1*01  186  ......................A..............T......G............G..G........................A....  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------CDR3-IMGT--------------->                                  
                                          I  Y  Y  C  A  R  H  R  D  D  Y  S  T  S  S  S  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7973     271  CATATATTACTGTGCGAGACATAGAGACGACTATAGTACGTCGTCCTCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  92.7% (268/289)  IGHV5-10-1*01  276  ...G...............----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                       
D  90.0% (9/10)     IGHD4-4*01     2    ----------------------------.....C....---------------------------------------------------  11
J  100.0% (41/41)   IGHJ5*02       11   ------------------------------------------------.........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_232743

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           311     4e-87
IGHD3-22*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGTGTACGGAAATCAG	TATGATGGTAGTGGTTA	CCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTGTACGGAAATCAGTATGATGGTAGTGGTTACCCTGACTCC	ARGVYGNQYDGSGYPDS	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  S  A  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_7974   1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAGTGCTTACTACTGGAGTTGGGTCCGGCAGCCCCCAGGGAAGGGGCTGGAG  90
V  90.9% (221/243)  IGHV4-59*08  49   ...........................G..............AG............C...A......................A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  L  Y  Y  R  G  S  T  R  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  K 
                    Query_7974   91   TGGATTGGGAATCTGTATTACAGAGGTAGTACCAGATACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAG  180
V  90.9% (221/243)  IGHV4-59*08  139  .........T..A.C........T..G..C....AC....................................G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  L  S  L  E  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  Y  G  N  Q  Y  D  G 
                    Query_7974   181  CAACTCTCCCTGGAGGTGCGCTCTGTCACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGGGGTGTACGGAAATCAGTATGATGGT  270
V  90.9% (221/243)  IGHV4-59*08  229  ..GT........A..C..A.......G....................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD3-22*01  8    ---------------------------------------------------------------------------------......A..  16

                                      ----------------->                                  
                                       S  G  Y  P  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7974   271  AGTGGTTACCCTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  94.1% (16/17)    IGHD3-22*01  17   ........--------------------------------------------  24
J  97.6% (40/41)    IGHJ4*02     8    -----------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_232742

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD2-8*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TAATGGTGT	GGCAGTGGCTAGAAGATTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAATGGTGTGGCAGTGGCTAGAAGATTTTTTGACTCC	ARDNGVAVARRFFDS	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  I  S  G  G  S  F  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  E  G  L  E 
                    Query_7975   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGGCTCCTTCAGTTCTTATTACTGGAGCTGGATTCGGCAGTCCCCAGGGGAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   .....................G..............A.....AG...C..............C......C........A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7975   91   TGGATTGGCTATGTCTACTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G...A....T..C.....................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  N  G  V  A  V  A  R  R 
                    Query_7975   181  CAGTTCTCCCTGAGGCTGACGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATAATGGTGTGGCAGTGGCTAGAAGA  270
V  93.5% (229/245)  IGHV4-59*01  229  .............A.....GC..........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD2-8*01   13   -----------------------------------------------------------------.........----------------  21

                                      ----------->                                  
                                       F  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_7975   271  TTTTTTGACTCCTGGGGCCAGGGAATCCTGGTCACCGTTTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.......A..............C............C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_232741

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     2e-90
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	N/A	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	TCCACCAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCACCATAACTGGTTCGACCCC	ARVHHNWFDP	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  D  V  Y  G  G  S  F  S  L  Y  F  W  T  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_7976   1    ACCCTGTCCCTCACCTGCGATGTCTATGGTGGGTCCTTCAGTCTTTACTTCTGGACGTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  92.2% (225/244)  IGHV4-34*01  49   ...................C......................GG.....A.....GC...A.............................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  S  N  H  S  G  T  S  T  Y  N  S  S  L  E  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7976   91   TGGATCGGGGAAAGCAATCATAGTGGAACCTCCACCTACAACTCGTCCCTCGAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-34*01  139  .....T.......T..............G.A...A.......C........A................A.....A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  H  H  N  W  F  D  P  W 
                    Query_7976   181  CAGTTCTCCCTGAAGCTGACTTCTGTGACCGCCGCGGACACGGCTGTATATTACTGTGCGAGAGTCCACCATAACTGGTTCGACCCCTGG  270
V  92.2% (225/244)  IGHV4-34*01  229  ...................GC..........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  98.0% (48/49)    IGHJ5*02     3    ------------------------------------------------------------------------..................  20

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_7976   271  GGCCAGGGTACCCTGGTCACCGTCTCCTCAG  301
J  98.0% (48/49)    IGHJ5*02     21   ........A......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_232740

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           339     2e-95
IGHD5-18*01                                                                                           16.1    2.4  
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTTCG	CAAGGGGATAAC	TACAGCTA	CGAATAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGCAAGGGGATAACTACAGCTACGAATAT	SQGDNYSYEY	281	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	166	21	9	12	0	42.9
FR3-IMGT	167	280	114	110	4	0	96.5
CDR3-IMGT (germline)	281	283	3	2	1	0	66.7
Total	N/A	N/A	283	250	33	0	88.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  Q  R  L  S  C  V  I  S  R  F  P  V  S  W  N
                    Query_7977   1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCACAGAGACTCTCCTGTGTAATCTCTAGGTTCCCCGTCAGTTGGAA  90
V  88.3% (250/283)  IGHV3-53*01  6    ..........G..................................C.T..............C.GC....G.....A........A.C..  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  I  N  W  V  R  Q  A  P  G  K  G  L  E  F  V  S  V  F  H  A  S  G  T  M  Y  Y  A  D  S
                    Query_7977   91   CTACATCAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAATTTGTCTCGGTTTTCCATGCCTCTGGCACAATGTACTATGCAGACTC  180
V  88.3% (250/283)  IGHV3-53*01  96   ......G.G.................................G.GG.....A...A.TT..AG.GG...T.GC.CA.....C........  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  D  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V
                    Query_7977   181  CGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGGACACACTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGT  270
V  88.3% (250/283)  IGHV3-53*01  186  ........................................A....G............................................  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><----------CDR3-IMGT--------->                                  
                                        Y  Y  C  S  Q  G  D  N  Y  S  Y  E  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_7977   271  TTATTACTGTTCGCAAGGGGATAACTACAGCTACGAATATTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  344
V  88.3% (250/283)  IGHV3-53*01  276  G.........G..-------------------------------------------------------------  288
                                        Y  Y  C  A                                                              
D  100.0% (8/8)     IGHD5-18*01  6    -------------------------........-----------------------------------------  13
J  97.1% (33/34)    IGHJ4*02     15   ----------------------------------------................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_232746

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ2*01                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTTGGGCAGTATC	CTATGGTTCGGGGAGTTA	GGTTCGC	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACTTGGGCAGTATCCTATGGTTCGGGGAGTTAGGTTCGCGGTACTTCGATCTC	AKDLGSILWFGELGSRYFDL	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  Y  A  M  D  W  V  R  Q  P  P  G  K  G  L  
                    Query_7978   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACTATGCCATGGACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ..........................................G..G..........AG.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  R  G  D  N  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_7978   91   AGTGGGTCTCAGCAATTAGTGGTCGTGGTGATAACACATTTTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  .............T.........A......G..G.....AC.................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  S  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  L  G  S  I  L  W  
                    Query_7978   181  AGAGTACGCTGTATCTGCAAATGGACAGCCTGAGAGCCGAAGACACGGCCGTATATTACTGTGCGAAAGACTTGGGCAGTATCCTATGGT  270
V  94.0% (235/250)  IGHV3-23*01  227  ...AC..................A................G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (18/18)   IGHD3-10*01  7    -----------------------------------------------------------------------------------.......  13

                                      R3-IMGT------------------------>                                  
                                      F  G  E  L  G  S  R  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_7978   271  TCGGGGAGTTAGGTTCGCGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  336
D  100.0% (18/18)   IGHD3-10*01  14   ...........-------------------------------------------------------  24
J  100.0% (48/48)   IGHJ2*01     6    ------------------................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_232745

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            357     1e-100
IGHJ6*02                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	N/A	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACCACTACGCTATGGACGTC	ARDYHYAMDV	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  P  Y  W  M  R  W  V  R  Q  A  P  G  K  G  P  
                    Query_7979  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTCCCTATTGGATGAGGTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  95.6% (239/250)  IGHV3-7*01  47   ............................................AG............C............................T..  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  S  I  N  Q  G  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_7979  91   AGTGGGTGGCCAGCATAAACCAGGGTGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  95.6% (239/250)  IGHV3-7*01  137  ............A......G..A.A.............................................................G...  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  H  Y  A  M  D  
                    Query_7979  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTATTGTGCGAGAGACTACCACTACGCTATGGACG  270
V  95.6% (239/250)  IGHV3-7*01  227  ....................................................G.....C...........--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  96.4% (53/55)    IGHJ6*02    8    ----------------------------------------------------------------------....T......G........  27

                                     ->                                 
                                     V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7979  271  TCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  305
J  96.4% (53/55)    IGHJ6*02    28   ...................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_232744

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         339     2e-95
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	N/A	N/A	TCACCTGCCAACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGATCACCTGCCAACCCCTACTACCACGCTCTGGACGTC	ARSPANPYYHALDV	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  V  Y  I  S  N  G  G  Y  S  W  T  W  I  R  Q  P  P  G  R  G 
                    Query_7980     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTACATCAGCAATGGTGGTTACTCCTGGACCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  93.6% (233/249)  IGHV4-30-2*01  49   ..................G............G..C........G.................G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Q  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  R  S 
                    Query_7980     91   CTGGAGTGGATTGGGTACATCTATCAAAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGCGTCACCATATCGGTAGACAGGTCC  180
V  93.6% (233/249)  IGHV4-30-2*01  139  ..........................T...............................A......A...........A............  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  V  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  A  N  P  Y  Y 
                    Query_7980     181  AAGAACCAGTTCTCCGTTAACTTGAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGATCACCTGCCAACCCCTACTAC  270
V  93.6% (233/249)  IGHV4-30-2*01  229  ...............C.G..GC....C..........................G...............---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  92.7% (51/55)    IGHJ6*02       8    -----------------------------------------------------------------------------------.......  14

                                        -------------->                                 
                                         H  A  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7980     271  CACGCTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  318
J  92.7% (51/55)    IGHJ6*02       15   T...G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_204931

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_7981   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_7981   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_7981   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_7981   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_127677

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           358     4e-101
IGHD3-10*01                                                                                           21.8    0.043 
IGHJ5*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GAGGAGTCGCGGCGTCACCTT	TTACTTTGGTTTGGGGA	CTTCTGGAGGA	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAGGAGTCGCGGCGTCACCTTTTACTTTGGTTTGGGGACTTCTGGAGGATGGTTCGACCCC	ARGRSRGVTFYFGLGTSGGWFDP	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7982   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGCTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  96.7% (237/245)  IGHV4-34*01  49   ...........................................G............C.................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7982   91   TGGATTGGCGAAATCAATCATAGTGGCAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCTGTAGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-34*01  139  ........G.................A............................................A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  G  R  S  R  G  V  T  F  Y 
                    Query_7982   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACTCGGCTGTGTATTACTGTGCGAGAGGGAGGAGTCGCGGCGTCACCTTTTAC  270
V  96.7% (237/245)  IGHV4-34*01  229  ...................G...............G...A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  88.2% (15/17)    IGHD3-10*01  4    --------------------------------------------------------------------------------------....  7

                                      3-IMGT----------------------------->                                  
                                       F  G  L  G  T  S  G  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7982   271  TTTGGTTTGGGGACTTCTGGAGGATGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  88.2% (15/17)    IGHD3-10*01  8    .A.....C.....---------------------------------------------------------  20
J  100.0% (46/46)   IGHJ5*02     6    ------------------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_317448

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            360     1e-101
IGHD3-3*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGTAGTCAAG	ACGATTTTTGGAGTGGTT	TGTTCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTAGTCAAGACGATTTTTGGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTC	ARDGSQDDFWSGLFHYYYGMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  P  P  G  K  G  L  
                    Query_7983  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTTAGTAGGTATTGGATGAGTTGGGTCCGCCAACCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-7*03  47   ...............................A..............C...........C...........GG..................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_7983  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-7*03  137  ........................................................A.................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><---------------------------
                                     K  N  S  V  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  Q  D  D  F  
                    Query_7983  181  AGAACTCAGTGTATCTGGAAATGAACAGCCTGAGGGCCGAGGACACGGCCGTATATTACTGTGCGAGAGATGGTAGTCAAGACGATTTTT  270
V  96.0% (240/250)  IGHV3-7*03  227  ........C........C................A.................G.................--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-3*01  6    ---------------------------------------------------------------------------------.........  14

                                     -CDR3-IMGT--------------------------->                                 
                                     W  S  G  L  F  H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7983  271  GGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  100.0% (18/18)   IGHD3-3*01  15   .........--------------------------------------------------------------  23
J  96.4% (54/56)    IGHJ6*02    7    ---------------.......C..C.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_104611

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_7984   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  V  S  V  D  T  S  K  S 
                    Query_7984   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCGTTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T....A.A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  I  S  L  S  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_7984   181  CAGATCTCCCTGAGCCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ...T.........AG........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_7984   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_104610

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           339     2e-95
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	TAACATG	ATTACCATGAT	TCCA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGATAACATGATTACCATGATTCCAGATGCTTTTGATATC	AGDNMITMIPDAFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	234	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  S  S  I  N  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  A 
                    Query_7985   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTAGCTCCATCAATAGTGGAGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGCC  90
V  93.2% (234/251)  IGHV4-31*03  49   ..............................G.........GC.....T........................................G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  D  S  G  G  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_7985   91   CTGGAGTGGATTGGATACATCTATGACAGTGGGGGCACCTCCTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCACTAGACACGTCT  180
V  93.2% (234/251)  IGHV4-31*03  139  ..............G.........T........A......A...........................T.........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  Q  L  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  G  D  N  M  I  T  M  I 
                    Query_7985   181  AGGAACCAGCTCTCCCTGAAGTTGAGCTCTGTGACTGTCGCGGACACGGCCGTATATTACTGTGCGGGAGATAACATGATTACCATGATT  270
V  93.2% (234/251)  IGHV4-31*03  229  .A.......T...........C...............C...............G............A....-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD3-22*01  3    ------------------------------------------------------------------------------.....T.....-  13

                                      ----------------->                                  
                                       P  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_7985   271  CCAGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  100.0% (49/49)   IGHJ3*02     2    ---.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_104612

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           413     2e-117
IGHD1-26*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              69.9    4e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCTTCT	TGGGAGCT	TTGTGTCGCCCCGGGGGCACGCCAATA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CTTCTTGGGAGCTTTGTGTCGCCCCGGGGGCACGCCAATAAC	LLGSFVSPRGHANN	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	287	113	109	4	0	96.5
Total	N/A	N/A	286	275	11	0	96.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_7986   2    AGGTTCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  91
V  96.2% (275/286)  IGHV5-51*03  2    ....G.......................G.............................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  H  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_7986   92   CCCACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGTTGGGAATCATCTATCCTGGTGACTCTGATACCAGATACA  181
V  96.2% (275/286)  IGHV5-51*03  92   G.T.........G.....................................A....G..................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  P  F  Q  G  H  V  T  I  S  A  D  T  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_7986   182  GCCCGCCCTTCCAAGGCCACGTCACCATCTCAGCCGACACGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  96.2% (275/286)  IGHV5-51*03  182  .....T.............G...................A........G.........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  L  L  G  S  F  V  S  P  R  G  H  A  N  N  W  G  Q  G  T  L  V  T  V  S  
                    Query_7986   272  CCGCCATGTATTACTGCCTTCTTGGGAGCTTTGTGTCGCCCCGGGGGCACGCCAATAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  361
V  96.2% (275/286)  IGHV5-51*03  272  ................--------------------------------------------------------------------------  287
                                      T  A  M  Y  Y                                                                             
D  100.0% (8/8)     IGHD1-26*01  8    ----------------------........------------------------------------------------------------  15
J  100.0% (36/36)   IGHJ4*02     13   ---------------------------------------------------------.................................  45

                                         
                                      S  
                    Query_7986   362  CAG  364
J  100.0% (36/36)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_104615

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           307     1e-85
IGHD2-2*01                                                                                            23.8    0.011
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-2*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	GCATCGTACAAAT	TATTGTAGTGGTACC	GACTGTTATC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGGCATCGTACAAATTATTGTAGTGGTACCGACTGTTATCACTGGTTCGACCCC	SRHRTNYCSGTDCYHWFDP	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	4	1	0	80
Total	N/A	N/A	242	219	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  L  N  G  S  F  S  D  *  F  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_7987   1    ACCCTGTCCCTCACCTGCGCTGTCTTGAATGGGTCCTTCAGTGATTAATTCTGGAGCTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  90.5% (219/242)  IGHV4-34*01  49   .........................ATGG..............G...C.A...................C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Q  I  N  H  G  G  Y  T  N  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_7987   91   TGGATTGGGCAAATCAACCATGGTGGATACACTAACTACAGTCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  90.5% (219/242)  IGHV4-34*01  139  .........G.......T...A.....AG...C.......AC................................A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  L  Y  F  C  S  R  H  R  T  N  Y  C  S  G  T 
                    Query_7987   181  CAGTTCTCCCTGAGGCTCAGCTCTGTGACCGCCGCGGACACGGCTCTGTATTTTTGTTCGAGGCATCGTACAAATTATTGTAGTGGTACC  270
V  90.5% (219/242)  IGHV4-34*01  229  .............A...G...........................G......AC...G....----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD2-2*01   5    ---------------------------------------------------------------------------.........A.....  19

                                      ----------------------->                                  
                                       D  C  Y  H  W  F  D  P  W  G  Q  G  T  L  V  T  I  S  S  
                    Query_7987   271  GACTGTTATCACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCATCTCCTCAG  328
J  97.9% (47/48)    IGHJ5*02     4    ----------......................................G.........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_104614

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           347     7e-98
IGHD3-10*01                                                                                           33.4    1e-05
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGGTCACCG	CTATGGTTCGGGGAGTT	GGGG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGGTCACCGCTATGGTTCGGGGAGTTGGGGCTACGGTATGGACGTC	ARSGHRYGSGSWGYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  A  G  K  G  L  
                    Query_7988   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTGCAGGCAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-33*01  47   ..............................................C...........................C...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  H  D  G  S  N  E  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  E  N  S  
                    Query_7988   91   AGTGGGTGGCAGTTATATGGCATGATGGAAGTAATGAACACTATGCAGACTCCGTGAAGGGTCGATTCACCATCTCCAGAGAGAATTCGA  180
V  94.8% (235/248)  IGHV3-33*01  137  ....................T..............A..T......................C....................C.....C.  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  V  Y  V  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  G  H  R  Y  G  S  
                    Query_7988   181  AGAACACGGTATATGTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGATCGGGTCACCGCTATGGTTCGG  270
V  94.8% (235/248)  IGHV3-33*01  227  ........C.G...C....A................................G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (17/17)   IGHD3-10*01  7    -------------------------------------------------------------------------------...........  17

                                      IMGT--------------------->                                 
                                      G  S  W  G  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7988   271  GGAGTTGGGGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (17/17)   IGHD3-10*01  18   ......-----------------------------------------------------  23
J  100.0% (49/49)   IGHJ6*02     14   ----------.................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_104617

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            388     5e-110
IGHD2-2*01                                                                                            27.6    8e-04 
IGHJ3*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAC	CAATTGACTCCAGCA	ATTGTACTAGTACCAGC	AGATGCC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACCAATTGACTCCAGCAATTGTACTAGTACCAGCAGATGCCGATGCTTTTGATATT	AHQLTPAIVLVPADADAFDI	263	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	49	2	0	96.1
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	110	4	0	96.5
CDR3-IMGT (germline)	263	268	6	6	0	0	100
Total	N/A	N/A	268	258	10	0	96.3


Alignments

                                     <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  S  S  G  V  A  V  G  W  I  R
                    Query_7989  1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTTTCACTCAGTAGTAGTGGAGTGGCTGTGGGCTGGATCCG  90
V  96.3% (258/268)  IGHV2-5*01  30   ...................................................C........C.C...........G...............  119
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                     -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                       Q  S  P  G  K  A  P  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T
                    Query_7989  91   TCAGTCCCCAGGAAAGGCCCCGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGTTACAGCCCATCTCTGAAGAGCAGGCTCAC  180
V  96.3% (258/268)  IGHV2-5*01  120  ....C...............T.......................................C.............................  209
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                     ---------------------FR3-IMGT----------------------------------------------------><-------
                                       I  T  R  D  T  S  K  N  Q  V  V  L  K  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  Q
                    Query_7989  181  CATCACCAGGGACACCTCCAAAAACCAGGTGGTCCTTAAAATGACCAACATGGACCCTGTGGACACAGCCACATATTATTGTGCACACCA  270
V  96.3% (258/268)  IGHV2-5*01  210  ........A.............................C.......................................C.........--  297
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                     ------------------CDR3-IMGT------------------------>                                  
                                       L  T  P  A  I  V  L  V  P  A  D  A  D  A  F  D  I  W  G  Q  G  T  T  V  T  V  S  S  
                    Query_7989  271  ATTGACTCCAGCAATTGTACTAGTACCAGCAGATGCCGATGCTTTTGATATTTGGGGCCAAGGGACAACGGTCACCGTCTCTTCAG  356
D  94.1% (16/17)    IGHD2-2*01  6    -------------......G..........--------------------------------------------------------  22
J  95.9% (47/49)    IGHJ3*02    2    -------------------------------------..............C................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_104616

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD6-19*01                                                                                           12.2    30   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTGGC	GGCTGG	CTTAC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTGGCGGCTGGCTTACGGACGTC	TRGGGWLTDV	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_7990   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTGGTTTCTACTGGAGCTGGATTCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   .............................T............A...A...............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  H  Y  S  G  H  T  N  Y  N  P  S  L  R  S  R  V  I  I  S  L  D  T  S  N  N 
                    Query_7990   91   TGGATTGGGAATATCCACTACAGTGGGCACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCATCATATCGCTGGACACGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  .........T.....T.T.........AG.......................A...........C......AG.A...........G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  I  S  L  K  V  N  S  G  T  A  A  D  T  A  L  Y  Y  C  T  R  G  G  G  W  L  T  D  V  W 
                    Query_7990   181  CAGATCTCCCTGAAGGTGAACTCTGGGACCGCTGCGGACACGGCCCTCTATTATTGTACGAGAGGTGGCGGCTGGCTTACGGACGTCTGG  270
V  90.6% (221/244)  IGHV4-59*01  229  ...T...........C...G.....T...................G.G.....C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  13   ---------------------------------------------------------------------......---------------  18
J  100.0% (40/40)   IGHJ6*02     23   --------------------------------------------------------------------------------..........  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_7990   271  GGCCAAGGGACCACGGTCACCGTCTCCTCA  300
J  100.0% (40/40)   IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_104618

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           316     2e-88
IGHD6-19*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAGAGGGGGGGGCCCA	TATAGTAGTGGCTGG	CTCCC	GTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAGAGGGGGGGGCCCATATAGTAGTGGCTGGCTCCCGTTTGACCTC	AKDRGGGPYSSGWLPFDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  N  N  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_7991   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAATAACTATGGCATGAACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-30*18  47   ....................................C.....G..G..........C.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  D  G  N  K  K  L  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_7991   91   AGTGGGTGGCACTTATATCGTATGATGGAAATAAAAAGTTGTTTGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.4% (226/250)  IGHV3-30*18  137  ...........G.......A..........G...T..A.AC.A...A......................................TT...  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  V  Y  L  Q  M  D  S  L  R  P  D  D  T  A  V  Y  H  C  A  K  D  R  G  G  G  P  Y  
                    Query_7991   181  AGAATACAGTGTATCTGCAAATGGACAGCCTGAGACCTGACGACACGGCCGTCTATCACTGTGCGAAAGATAGAGGGGGGGGCCCATATA  270
V  90.4% (226/250)  IGHV3-30*18  227  ....C..GC..............A...........G....G........T..G...T.............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (14/15)    IGHD6-19*01  4    --------------------------------------------------------------------------------------....  7

                                      IMGT--------------------->                                  
                                      S  S  G  W  L  P  F  D  L  W  G  Q  G  T  L  V  I  V  S  P  
                    Query_7991   271  GTAGTGGCTGGCTCCCGTTTGACCTCTGGGGCCAGGGAACCCTGGTCATCGTCTCCCCAG  330
D  93.3% (14/15)    IGHD6-19*01  8    .C.........-------------------------------------------------  18
J  90.9% (40/44)    IGHJ5*02     8    ----------------...C....C.......................C.......T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_252138

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           357     1e-100
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GGG	AGTGGCTGGT	TCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGAGGGGAGTGGCTGGTTCCCTTTGAGCAC	GGGEWLVPFEH	290	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	67	7	0	90.5
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	19	5	0	79.2
FR3-IMGT	176	289	114	104	10	0	91.2
CDR3-IMGT (germline)	290	296	7	5	2	0	71.4
Total	N/A	N/A	294	261	33	0	88.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  R  F  T  
                    Query_7992   3    AGGTCCAGCTGGTACAGTCTGGAGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTAAAACCTCTGGTTATAGATTTACCA  92
V  88.8% (261/294)  IGHV1-18*01  2    ....T........G..............G...................................C..GG.T........C.CC.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  L  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  T  T  Y  N  D  D  T  K  Y  
                    Query_7992   93   GCCTTGGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGCTGGGCTGGATCACCACTTACAATGATGACACGAAGTATC  182
V  88.8% (261/294)  IGHV1-18*01  92   ..TA.........C..........................G.........A....A.......G.G.........G.A....A..C...G  181
                                      S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      P  Q  K  F  Q  G  R  L  T  L  T  T  D  R  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  
                    Query_7992   183  CACAGAAGTTTCAGGGCAGACTCACGTTGACCACAGACAGATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTCAGATCTGACGACA  272
V  88.8% (261/294)  IGHV1-18*01  182  ........C.C.........G....CA............C....................................G.............  271
                                      A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  

                                      ----------------><-----------CDR3-IMGT----------->                                  
                                      T  A  V  Y  Y  C  G  G  G  E  W  L  V  P  F  E  H  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_7992   273  CGGCCGTATATTACTGTGGGGGAGGGGAGTGGCTGGTTCCCTTTGAGCACTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  356
V  88.8% (261/294)  IGHV1-18*01  272  .......G..........C.A...------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                              
D  100.0% (10/10)   IGHD6-19*01  10   ---------------------------..........-----------------------------------------------  19
J  93.2% (41/44)    IGHJ4*02     5    ----------------------------------------......CT....................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_31362

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_7993   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  96.4% (239/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_7993   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  96.4% (239/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_7993   181  AAGAACCAGTTCTCCCTGAGGCTCAGCTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  96.4% (239/248)  IGHV4-31*03  229  ...................A...G................................T...........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_7993   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_103342

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           406     1e-115
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*01                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	274	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_7994   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCCCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.1% (274/288)  IGHV5-51*03  6    .............................................T...............................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_7994   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.1% (274/288)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  N  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_7994   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAATTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.1% (274/288)  IGHV5-51*03  186  ....................................G........C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  H  *  T  L  V  T  F  S  S
                    Query_7994   271  CGTCTATTACTGTGCGAGGCGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCATTGAACCCTAGTCACCTTCTCCTC  360
V  95.1% (274/288)  IGHV5-51*03  276  .A.G..............------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  91.7% (44/48)    IGHJ4*01     1    --------------------------------------------......................AG.......G......G.......  46

                                        
                                        
                    Query_7994   361  AG  362
J  91.7% (44/48)    IGHJ4*01     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_57191

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           380     1e-107
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ6*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGCA	N/A	GTACTACTATGGTTC	TT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCAGTACTACTATGGTTCTTTGGACCTC	ARQYYYGSLDL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  D  S  L  K  I  S  C  R  G  F  G  Y  S  F  T  S  Y
                    Query_7995   1    GCAGCTGGTGCAGTCTGGAGCAGAGCTGAAAAAGCCCGGGGACTCTCTGAAGATCTCTTGTAGGGGTTTTGGATACAGCTTTACCAGCTA  90
V  91.8% (267/291)  IGHV5-51*01  6    .........................G................G..............C....A.....C.....................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  L  I  F  P  N  D  F  D  A  R  Y  S  P
                    Query_7995   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGTAAAGGCTTGGAGTGGATGGGCCTCATCTTTCCTAATGACTTCGATGCCAGATACAGTCC  180
V  91.8% (267/291)  IGHV5-51*01  96   ..............................G......C.............GA......A....GG.....CT...A..........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  L  S  V  D  K  S  T  S  T  A  Y  L  E  W  S  S  L  K  A  S  D  T  A
                    Query_7995   181  GTCCTTCCAAGGCCAGGTCACCCTCTCAGTCGACAAGTCCACCAGTACCGCCTACCTGGAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  91.8% (267/291)  IGHV5-51*01  186  ......................A......C...........T...C............C.......C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                 
                                        I  Y  Y  C  A  R  Q  Y  Y  Y  G  S  L  D  L  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_7995   271  CATTTATTACTGTGCGAGGCAGTACTACTATGGTTCTTTGGACCTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  349
V  91.8% (267/291)  IGHV5-51*01  276  ...G..............A..----------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                             
D  93.3% (14/15)    IGHD3-10*01  1    ---------------------...T...........-------------------------------------------  15
J  97.6% (40/41)    IGHJ6*02     22   --------------------------------------.....G...................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_103340

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           335     4e-94
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_7996   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.9% (229/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  N  R  V  T  I  S  V  D  T  S 
                    Query_7996   91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAATCGAGTCACCATTTCCGTAGACACGTCC  180
V  93.9% (229/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C....G............A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_7996   181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  93.9% (229/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_7996   271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  319
J  97.9% (47/48)    IGHJ4*02     1    -....................................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_103341

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            392     2e-111
IGHD3-22*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGTCCCCTC	ATTACTATGATAGTCGTGGT	A	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGTCCCCTCATTACTATGATAGTCGTGGTAACTTTGACTTC	ARSPHYYDSRGNFDF	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	285	268	17	0	94


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  L  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  N  Y 
                    Query_7997   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCTTGGGGCCTCAGTGAAAGTTTCCTGCAAGGCTTCTGGATACACCTTCAGTAACTAT  91
V  94.0% (268/285)  IGHV1-3*01   7    .....T...........G................C...............G...............................C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  E  Y  S  Q 
                    Query_7997   92   GCTATGCATTGGGTGCGCCAGGCCCCCGGACAAAGGCTTGAGTGGATGGGGTGGATCAACGCTGGCAATGGTAACACAGAATATTCACAG  181
V  94.0% (268/285)  IGHV1-3*01   97   ..................................................A...........................A...........  186
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  I  T  R  A  T  S  A  N  R  A  Y  M  E  L  S  R  L  T  S  E  D  T  A 
                    Query_7997   182  AAGTTTCAGGGCAGAGTCACCATTACCAGGGCCACATCCGCGAATAGAGCCTACATGGAGCTGAGCAGACTGACATCTGAAGACACGGCT  271
V  94.0% (268/285)  IGHV1-3*01   187  .....C.........................A...........GC.C.....................C....G................  276
                                       K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  S  P  H  Y  Y  D  S  R  G  N  F  D  F  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_7997   272  GTATATTATTGTGCGCGGTCCCCTCATTACTATGATAGTCGTGGTAACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  361
V  94.0% (268/285)  IGHV1-3*01   277  ..G.....C......---------------------------------------------------------------------------  291
                                       V  Y  Y  C  A                                                                            
D  95.0% (19/20)    IGHD3-22*01  3    -------------------------..............A.....---------------------------------------------  22
J  97.8% (44/45)    IGHJ4*02     4    ----------------------------------------------.........A..................................  47

                                       
                                       
                    Query_7997   362  G  362
J  97.8% (44/45)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_103347

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           364     5e-103
IGHD2-2*01                                                                                            14.1    8.5   
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	C	TACCAGC	CTCGTTCAA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCTACCAGCCTCGTTCAATACTACTGCTACGGTATGGACGTC	AKATSLVQYYCYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  P  
                    Query_7998   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCCGG  90
V  96.8% (241/249)  IGHV3-30*18  47   .......................................................................................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  S  Y  D  G  S  Y  E  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  S  
                    Query_7998   91   AGTGGGTGGCAATCATATCATATGATGGAAGTTATGAATACTATGCAGACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.8% (241/249)  IGHV3-30*18  137  ...........G.T..................A..A....................A.................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  M  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  T  S  L  V  Q  Y  
                    Query_7998   181  AGAATACGATGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGCTACCAGCCTCGTTCAATACT  270
V  96.8% (241/249)  IGHV3-30*18  227  ....C...C............................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD2-2*01   16   ----------------------------------------------------------------------.......-------------  22
J  96.5% (55/57)    IGHJ6*02     6    --------------------------------------------------------------------------------------....  9

                                      T------------------>                                 
                                      Y  C  Y  G  M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_7998   271  ACTGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCTCCGTCTCCTCA  323
J  96.5% (55/57)    IGHJ6*02     10   ...A.....................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_57196

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD1-26*01                                                                                           12.2    31   
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARAKGIAVIVDAFDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  P  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_7999   1    ACCCTGTCCCTCACCTGCCCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ..................A.....................G............................C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  V  S  V  D  M  S  N  N 
                    Query_7999   91   TGGATTGGATATATCTATTACAGAGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAGACATGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G..............T....G.....A......C.....CC................CA.A..........C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  K  G  I  A  V  I  V  D 
                    Query_7999   181  CGGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGTGCGAGAGCTAAGGGTATCGCTGTTATAGTAGAT  270
V  90.6% (221/244)  IGHV4-59*01  229  .A...........AG.................T.......CG.....G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------------......----  8
J  91.8% (45/49)    IGHJ3*01     2    ---------------------------------------------------------------------------------------...  4

                                      ----------->                                  
                                       A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_7999   271  GCTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  316
J  91.8% (45/49)    IGHJ3*01     5    .........G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_57197

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         330     1e-92
IGHD2-15*01                                                                                           12.2    32   
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTCTCGA	CTACTC	TTCCTGGGGTCTACAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCTCGACTACTCTTCCTGGGGTCTACATTATGGACGTC	ARVSTTLPGVYIMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	56	27	26	1	0	96.3
FR2-IMGT	57	107	51	48	3	0	94.1
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  R  L  S  C  V  V  P  G  Y  S  I  S  R  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  
                    Query_8000     4    CCCTGAGACTCTCCTGTGTTGTCCCTGGTTACTCCATCAGCAGGGGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGACTGG  93
V  93.1% (228/245)  IGHV4-38-2*01  50   .....TCC...A....C.C....T...................T.......................G.................G....  139
                                           L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  G  T  I  S  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  
                    Query_8000     94   AGTGGATTGGGACTATCTCTCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGGGTCACCATATCAGTGGACACGTCCAAGA  183
V  93.1% (228/245)  IGHV4-38-2*01  140  ............G.....A..........................................A..............A.............  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><-----------------CDR3-IMGT----
                                        N  Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  V  S  T  T  L  P  G  V  
                    Query_8000     184  ACCAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTCCTGTGCGAGAGTCTCGACTACTCTTCCTGGGGTCT  273
V  93.1% (228/245)  IGHV4-38-2*01  230  ...............A......C...............................A..........-------------------------  294
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (6/6)     IGHD2-15*01    25   ------------------------------------------------------------------------......------------  30

                                        ------------->                                 
                                        Y  I  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8000     274  ACATTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  100.0% (43/43)   IGHJ6*02       20   ----...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_57199

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           344     6e-97
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGTCCCTC	ACGGTGAC	CTAGATT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGACGTCCCTCACGGTGACCTAGATTCC	ARDVPHGDLDS	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  S  T  F  S  S  F  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8001   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATCCACCTTCAGCAGCTTCTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-74*01  47   .................................T.........T....A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  I  T  V  D  G  S  G  T  V  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8001   91   AGTGGGTCTCACGCATTACTGTTGATGGCAGTGGCACAGTCTATGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-74*01  137  T............T....A.AG......G...A.....AG...C..............................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  V  P  H  G  D  L  
                    Query_8001   181  AGAACACGTTGTATCTGCAAATGAACAGTCTGAGAGCCGACGACACGGCTGTGTATTACTGTGCAAGAGACGTCCCTCACGGTGACCTAG  270
V  94.0% (235/250)  IGHV3-74*01  227  ........C...............................G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD4-17*01  6    ------------------------------------------------------------------------------........----  13

                                      ---->                                  
                                      D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8001   271  ATTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (36/36)   IGHJ5*02     16   ---....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_103348

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	216	29	0	88.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_8002   1    ACCCTGTCCCTCACCTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  88.2% (216/245)  IGHV4-34*01  49   .......................CTA..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_8002   91   TGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAA  180
V  88.2% (216/245)  IGHV4-34*01  139  ................A............CA.C.AC......C..T......A...............A....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W 
                    Query_8002   181  CAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCTGGCGAAGACAGCGCAACTGG  270
V  88.2% (216/245)  IGHV4-34*01  229  ..GT...........C..A......T.....................G.....C......A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (49/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------.......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8002   271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (49/50)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_103349

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           338     5e-95
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GTTAGGGGGAG	AGGACCAATGGGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTAGGGGGAGAGGACCAATGGGGGGACTACCTTGACCGC	ARLGGEDQWGDYLDR	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	229	13	0	94.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  E  K  G  L  E 
                    Query_8003   1    ACCCTGTCCCTCACCTGCACTGTGTCTAGTGGCTCCATCAGCAGTTACTACTGGAGTTGGATCCGGCAGTCCCCAGAGAAGGGACTGGAG  90
V  94.6% (229/242)  IGHV4-59*08  49   .......................C...G.............T..............C............C......G.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  E  N 
                    Query_8003   91   TGGATTGGATATATCAACTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCGAGAAC  180
V  94.6% (229/242)  IGHV4-59*08  139  ........G......T.T..................................................................A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  G  G  E  D  Q  W  G  D 
                    Query_8003   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCCTGTATTATTGTGCGAGGTTAGGGGGAGAGGACCAATGGGGGGAC  270
V  94.6% (229/242)  IGHV4-59*08  229  ...................G.........................G.......C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (10/11)    IGHD3-16*01  14   --------------------------------------------------------------...T.......-----------------  24
J  93.8% (45/48)    IGHJ4*02     1    ----------------------------------------------------------------------------------------..  2

                                      ----------->                                  
                                       Y  L  D  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8003   271  TACCTTGACCGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  93.8% (45/48)    IGHJ4*02     3    ...T.....TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_351225

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*02                                                                                            388     5e-110
IGHD3-3*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACAC	GCTT	GTATTACGATTCTCGGAATGATTAT	CACTACCACTTCCG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACACGCTTGTATTACGATTCTCGGAATGATTATCACTACCACTTCCGCTTTGACCAC	TRLYYDSRNDYHYHFRFDH	263	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	109	5	0	95.6
CDR3-IMGT (germline)	263	266	4	3	1	0	75
Total	N/A	N/A	266	257	9	0	96.6


Alignments

                                     <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  L  G  V  G  W  I  R
                    Query_8004  1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGATTCTCACTCAGCACTAGTGGATTGGGTGTGGGCTGGATCCG  90
V  96.6% (257/266)  IGHV2-5*02  30   ................................................G.....................G...................  119
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                     -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  N  R  L  T
                    Query_8004  91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTCGCACTCATTTATTGGGATGATGATAAGCGCTACAGCCCATCTCTGAAGAACAGGCTCAC  180
V  96.6% (257/266)  IGHV2-5*02  120  ..............................T.................................................G.........  209
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                     ---------------------FR3-IMGT----------------------------------------------------><-------
                                       I  T  K  D  T  S  K  D  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  T  R  L
                    Query_8004  181  CATCACCAAGGACACCTCCAAAGATCAGGTGGTCCTAACAATGACCAACATGGACCCCGTGGACACAGCCACATATTACTGTACACGCTT  270
V  96.6% (257/266)  IGHV2-5*02  210  ......................A.C...........T....................T........................G...----  295
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A      

                                     ----------------CDR3-IMGT----------------------->                                  
                                       Y  Y  D  S  R  N  D  Y  H  Y  H  F  R  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8004  271  GTATTACGATTCTCGGAATGATTATCACTACCACTTCCGCTTTGACCACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  353
D  84.0% (21/25)    IGHD3-3*01  1    ...........T.T...G..G....----------------------------------------------------------  25
J  95.5% (42/44)    IGHJ4*02    5    ---------------------------------------.......T.............A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_317442

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           377     1e-106
IGHD3-16*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GGGGGGGGCGG	GGGGGAG	CCCAGGT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGGCGGGGGGGAGCCCAGGTCTACGCTATGGACGTC	GGGRGGAQVYAMDV	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	100	14	0	87.7
CDR3-IMGT (germline)	289	289	1	1	0	0	100
Total	N/A	N/A	289	265	24	0	91.7


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_8005   1    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  90
V  91.7% (265/289)  IGHV1-69*01  1    .....G.................G..................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  P  I  S  W  V  R  L  A  P  G  Q  G  L  E  W  M  G  G  I  I  L  I  F  R  T  A  N  Y 
                    Query_8005   91   AGTTATCCTATCAGTTGGGTGCGACTGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGTATCATCCTTATCTTTCGAACAGCAAACTAC  180
V  91.7% (265/289)  IGHV1-69*01  91   ..C...G.......C..........A.................................G.......C.......G.T............  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       P  Q  K  F  Q  G  G  V  T  I  S  A  D  V  S  T  N  T  A  Y  M  E  L  R  G  L  P  S  E  D 
                    Query_8005   181  CCACAGAAGTTCCAGGGCGGAGTCACGATTTCCGCGGACGTATCCACGAACACAGCCTACATGGAACTGAGGGGTCTGCCATCTGAGGAC  270
V  91.7% (265/289)  IGHV1-69*01  181  G.................A...........A.........A........G...............G.....CA.C...AG..........  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       P  A  V  Y  S  C  G  G  G  R  G  G  A  Q  V  Y  A  M  D  V  W  G  Q  G  T  P  V  T  V  S 
                    Query_8005   271  CCGGCCGTTTATTCCTGTGGGGGGGGGCGGGGGGGAGCCCAGGTCTACGCTATGGACGTCTGGGGCCAGGGGACCCCGGTCACTGTCTCC  360
V  91.7% (265/289)  IGHV1-69*01  271  A.......G....A.....-----------------------------------------------------------------------  289
                                       T  A  V  Y  Y  C                                                                         
D  100.0% (7/7)     IGHD3-16*01  18   ------------------------------.......-----------------------------------------------------  24
J  91.8% (45/49)    IGHJ6*02     14   --------------------------------------------.....G..................A......A.......C......  59

                                         
                                       S 
                    Query_8005   361  TCA  363
J  91.8% (45/49)    IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_28288

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           280     1e-77
IGHD5-12*01                                                                                           14.1    8.1  
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGAGTCG	GTGGCTA	TT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGAGTCGGTGGCTATTACAACTGGTTCGACCCC	ARRVGGYYNWFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	211	32	0	86.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  F  R  N  Y  Y  Y  N  W  I  R  Q  S  P  G  R  G  L  E 
                    Query_8006   1    ACCCTGTCCCTCACCTGCACGGTCTCTGGTGGCTCCTTCAGAAATTACTACTACAATTGGATTCGGCAGTCCCCAGGGAGGGGACTGGAG  90
V  86.8% (211/243)  IGHV4-59*01  49   ....................T...............A....T.G........GG.GC.....C......C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  F  T  G  G  T  K  Y  N  P  S  F  K  S  R  V  S  I  S  V  D  A  S  K  N 
                    Query_8006   91   TGGATTGGACATATTTATTTTACTGGGGGCACCAAGTATAACCCCTCCTTCAAAAGTCGAGTCTCCATCTCAGTGGACGCGTCGAAGAAC  180
V  86.8% (211/243)  IGHV4-59*01  139  ........GT....C....AC.G....A.......C..C.........C....G.........A....A.....A...A....C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  T  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  V  G  G  Y  Y  N  W  F 
                    Query_8006   181  CAGTTCTCCCTGACTCTAAACTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAAGAGTCGGTGGCTATTACAACTGGTTC  270
V  86.8% (211/243)  IGHV4-59*01  229  .............AG..G.G...........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-12*01  10   ----------------------------------------------------------------------.......-------------  16
J  94.1% (48/51)    IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  A  L  V  T  V  S  A  
                    Query_8006   271  GACCCCTGGGGCCAGGGAGCGCTGGTCACCGTCTCCGCAG  310
J  94.1% (48/51)    IGHJ5*02     12   ..................A.C...............T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_177878

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           341     5e-96
IGHD1-26*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TG	GGTATAGT	TATGGACCAGCTTAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGGTATAGTTATGGACCAGCTTATTACTTTGACTAC	AKDGYSYGPAYYFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  T  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8007   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACCTTCAGGACCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  93.6% (234/250)  IGHV3-30*18  47   ............................T..............T.G.....G.................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  T  Y  Y  R  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8007   91   AGTGGGTGGCTGTTATCTCATATGATGGAAGTAATACATACTATAGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-30*18  137  ..........A.....A...................A.......GC............................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  D  T  L  Y  M  E  L  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  G  Y  S  Y  G  P  
                    Query_8007   181  AGGACACGCTGTATATGGAACTGAGCAGCCTGAGAGCTGAGGACACGGCTGTCTATTACTGTGCGAAAGATGGGTATAGTTATGGACCAG  270
V  93.6% (234/250)  IGHV3-30*18  227  ..A...........C..C..A...A...........................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD1-26*01  1    ------------------------------------------------------------------------........----------  8

                                      ---------------->                                  
                                      A  Y  Y  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_8007   271  CTTATTACTTTGACTACTGGGGCCAGGGAACCCTGGTCAGCGTCTCCTCAG  321
J  97.8% (45/46)    IGHJ4*02     3    -----..................................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_351226

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     3e-90
IGHD6-19*01                                                                                           18.0    0.66 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	242	26	6	88.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_8008   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.3% (242/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_8008   91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.3% (242/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_8008   181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.3% (242/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_8008   271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.3% (242/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_317443

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8009   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_8009   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_8009   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8009   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_28282

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           343     2e-96
IGHD2-15*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCAGATCGAA	GATCTTGTAGTGGT	AGACGGTGCTACCCCC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCAGATCGAAGATCTTGTAGTGGTAGACGGTGCTACCCCCTTGAGTAC	AKADRRSCSGRRCYPLEY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  A  M  S  W  V  R  Q  A  P  G  K  V  L  
                    Query_8010   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGCCATGAGCTGGGTCCGCCAGGCCCCAGGGAAGGTGCTGG  90
V  94.3% (233/247)  IGHV3-23*01  47   ...............................................T.........................T..........G.....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  A  S  D  D  G  T  Y  H  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_8010   91   AGTGGGTCTCAGCTATTAGTGCTAGTGATGACGGCACATACCACGCAGACTCCGTGAGGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.3% (233/247)  IGHV3-23*01  137  .....................G.....G..GTA........T...............A................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  F  L  Q  M  S  R  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  D  R  R  S  C  S  
                    Query_8010   181  AGAACACGCTGTTTCTGCAGATGAGCAGACTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGGCAGATCGAAGATCTTGTAGTG  270
V  94.3% (233/247)  IGHV3-23*01  227  ............A......A....A...C......................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD2-15*01  3    ------------------------------------------------------------------------------...A........  14

                                      IMGT--------------------->                                  
                                      G  R  R  C  Y  P  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8010   271  GTAGACGGTGCTACCCCCTTGAGTACTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  330
D  92.9% (13/14)    IGHD2-15*01  15   ..----------------------------------------------------------  16
J  95.2% (40/42)    IGHJ4*02     7    ------------------....C.......................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_28283

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8011   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_8011   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_8011   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8011   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  317
J  100.0% (46/46)   IGHJ4*02     1    -..............................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_28280

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            332     4e-93
IGHD3-22*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAGG	ATTACTTTGATAGGAGT	CGTCACGACGAATT	CGGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCAGGATTACTTTGATAGGAGTCGTCACGACGAATTCGGTCTGGACGTC	ARDQDYFDRSRHDEFGLDV	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  Y  A  V  S  G  D  S  F  S  G  D  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_8012   1    ACCCTGTCCCTCACCTACGCTGTCTCTGGTGACTCCTTCAGTGGCGATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  92.7% (230/248)  IGHV4-4*02   49   ................G..............G....A....CA.TAG...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  A  I  I  S  I  D  K  S  N 
                    Query_8012   91   GAGTGGATTGGGGAAGTCTATGATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGCCATCATATCAATAGACAAGTCCAAC  180
V  92.7% (230/248)  IGHV4-4*02   139  ...............A.....C..........................................T..C.......G.............G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       K  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  D  Y  F  D  R  S 
                    Query_8012   181  AAACAGTTCTCCCTAAAACTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGACCAGGATTACTTTGATAGGAGT  270
V  92.7% (230/248)  IGHV4-4*02   229  ..C...........G..G....G.............................................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  88.2% (15/17)    IGHD3-22*01  3    -------------------------------------------------------------------------......A......T...  19

                                      MGT----------------------->                                 
                                       R  H  D  E  F  G  L  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_8012   271  CGTCACGACGAATTCGGTCTGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  330
J  95.7% (44/46)    IGHJ6*02     17   --------------....A.......................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_351227

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         297     7e-83
IGHD4-17*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GTCGAAAAGG	CTACGGTGACTAC	GGAACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGTCGAAAAGGCTACGGTGACTACGGAACTTTTGACTCC	ARGRKGYGDYGTFDS	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	96	18	0	84.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	220	30	0	88


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  S  V  A  G  D  S  I  R  S  S  D  D  Y  W  N  W  I  R  Q  P  P  G  K  G 
                    Query_8013     1    ACCCTGTCCCTCACCTGCTCTGTCGCTGGTGACTCCATCAGAAGTAGTGATGACTACTGGAATTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  88.0% (220/250)  IGHV4-30-4*01  49   ..................A.....T......G.........C...G.....T.........G............................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  Y  S  G  A  S  Y  S  N  P  S  L  R  S  R  V  S  L  S  V  D  T  S 
                    Query_8013     91   CTGGAGTGGATTGGCTACATCCATTACAGTGGGGCCTCCTACTCCAATCCGTCCCTCAGGAGTCGAGTTTCCTTATCGGTGGACACGTCT  180
V  88.0% (220/250)  IGHV4-30-4*01  139  ..............G......T...........AG.A......A...C..........A..........A..A....A..A........C  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         G  N  H  F  S  L  N  V  R  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  K  G  Y  G  D 
                    Query_8013     181  GGGAACCACTTCTCCCTGAACGTGAGGTCTCTGACGGCCGCGGACACGGCCGTGTATTATTGTGCCAGAGGTCGAAAAGGCTACGGTGAC  270
V  88.0% (220/250)  IGHV4-30-4*01  229  AA......G...........GC....C...G....T.....A.................C..........--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD4-17*01    4    --------------------------------------------------------------------------------..........  13

                                        ----------------->                                  
                                         Y  G  T  F  D  S  W  G  L  G  T  L  V  S  V  S  S  
                    Query_8013     271  TACGGAACTTTTGACTCCTGGGGCCTGGGAACTCTGGTCTCCGTCTCCTCAG  322
D  100.0% (13/13)   IGHD4-17*01    14   ...-------------------------------------------------  16
J  90.7% (39/43)    IGHJ4*02       6    ---------.......A........A......C......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_177877

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           329     3e-92
IGHD5-18*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGCTCGATGGATCCCCCGAACC	GTGGATACA	ATTACCTGTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGCTCGATGGATCCCCCGAACCGTGGATACAATTACCTGTCCTAC	AKDGSMDPPNRGYNYLSY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8014   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-30*18  47   ..........................................G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  H  A  G  T  Y  K  Y  Y  S  D  S  L  K  G  R  F  T  I  S  S  D  N  A  
                    Query_8014   91   AGTGGCTGGCTGTTATATCACATGCTGGAACTTATAAATACTATTCAGACTCCCTGAAGGGCCGATTCACCATCTCCAGCGACAATGCCA  180
V  92.0% (230/250)  IGHV3-30*18  137  .....G....A.........T...A.....G.A...........G........G.........................A......T...  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  S  T  V  S  L  Q  M  N  S  L  T  I  E  D  T  G  V  Y  Y  C  A  K  D  G  S  M  D  P  P  
                    Query_8014   181  AGAGCACAGTGTCTCTGCAAATGAACAGCCTGACAATTGAGGACACGGGTGTGTATTACTGTGCGAAAGATGGCTCGATGGATCCCCCGA  270
V  92.0% (230/250)  IGHV3-30*18  227  ...A...GC...A....................G.GC...........C.....................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      IMGT--------------------->                                  
                                      N  R  G  Y  N  Y  L  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8014   271  ACCGTGGATACAATTACCTGTCCTACTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  330
D  100.0% (9/9)     IGHD5-18*01  1    ---.........------------------------------------------------  9
J  97.4% (37/38)    IGHJ4*02     11   ----------------------........................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_177876

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           305     3e-85
IGHD2-21*02                                                                                           10.3    118  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	219	24	0	90.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E  
                    Query_8015   4    CCCTGAGACTCTCCTGTTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAAT  93
V  90.1% (219/243)  IGHV4-59*08  50   .....TCC...A....CA............G......C.G..G................A....G.......................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N  
                    Query_8015   94   GGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAACC  183
V  90.1% (219/243)  IGHV4-59*08  140  ......G.........T.....T.....CA.....T...................T........CA........................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M  
                    Query_8015   184  AGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATGG  273
V  90.1% (219/243)  IGHV4-59*08  230  ..............C...............................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (5/5)     IGHD2-21*02  17   ------------------------------------------------------------------------.....-------------  21
J  92.0% (46/50)    IGHJ6*02     13   ------------------------------------------------------------------------------.......T....  24

                                      ---->                                 
                                      A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_8015   274  CCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  311
J  92.0% (46/50)    IGHJ6*02     25   A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_177875

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           357     1e-100
IGHD6-19*01                                                                                           21.8    0.040 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-19*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCAGG	GCAGTGGCTGG	CACG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTC	ARVPGQWLARGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	237	9	0	96.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  N  W  V  R  Q  A  P  R  K  G  L  
                    Query_8016   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGAACTGGGTCCGCCAGGCTCCAAGGAAGGGGCTGG  90
V  96.3% (237/246)  IGHV3-53*01  47   ................................................A........G...................G............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  *  V  M  Y  S  G  G  T  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_8016   91   AGTGGGTCTAAGTTATGTATAGCGGTGGGACCACATACTACGCAGAGTCCGTGAAGGGCCGATTCACCATCTCAAGAGACAATTCCAAGA  180
V  96.3% (237/246)  IGHV3-53*01  137  .........C......T...........T.G...............C..........................C................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  G  Q  W  L  A  R  
                    Query_8016   181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGTCCCAGGGCAGTGGCTGGCACGCG  270
V  96.3% (237/246)  IGHV3-53*01  227  ..................................................................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD6-19*01  8    -------------------------------------------------------------------------...........------  18
J  100.0% (46/46)   IGHJ6*02     17   ----------------------------------------------------------------------------------------..  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8016   271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (46/46)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_177874

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           344     6e-97
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGAGA	TCGGGGA	AG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGAGATCGGGGAAGACTACTTTAACTAC	ARAEIGEDYFNY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  N  W  I  R  R  L  P  G  K  G 
                    Query_8017   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAACTGGATCCGCCGGCTCCCAGGGAAGGGC  90
V  94.0% (235/250)  IGHV4-31*03  49   .............................................................G...........A..A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  N  Y  Y  S  V  S  S  Y  F  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_8017   91   CTGGAGTGGATTGGCTACAACTATTATAGTGTGAGCTCCTACTTCAACCCGTCCCTCAAAAGTCGAGTTACCATATCATTAGACACGTCT  180
V  94.0% (235/250)  IGHV4-31*03  139  ..............G....T......C....G....A......A...............G..................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  E  I  G  E  D  Y 
                    Query_8017   181  AAGAACCAGTTCTCCCTGCAGCTCAGCTCTGTGACTGCCGCGGACTCGGCCGTTTATTACTGTGCGAGAGCCGAGATCGGGGAAGACTAC  270
V  94.0% (235/250)  IGHV4-31*03  229  ..................A....G.....................A.......G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-10*01  14   ----------------------------------------------------------------------------.......-------  20
J  93.8% (45/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  N  Y  W  G  R  G  T  L  V  P  V  S  S  
                    Query_8017   271  TTTAACTACTGGGGCCGGGGAACCCTGGTCCCCGTCTCCTCAG  313
J  93.8% (45/48)    IGHJ4*02     6    ...G............A.............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_108049

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           403     1e-114
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ2*01                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGA	TACTATGACAGTAGTGGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTC	ARDGYYDSSGYYYDL	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  S  Y  S  F  S  S  H 
                    Query_8018   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTAGTTACAGTTTTAGCAGCCAC  91
V  94.5% (274/290)  IGHV1-18*04  7    .....................................................................G......CC....C....T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  D  Y  A  R 
                    Query_8018   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGGTGGATCAGCGGTTACAATGGTAACACAGACTATGCACGG  181
V  94.5% (274/290)  IGHV1-18*04  97   ................................A.................A..........C................A.........A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  *  G  R  V  T  M  T  A  D  T  S  T  S  T  A  Y  M  E  L  R  G  L  T  S  D  D  T  A 
                    Query_8018   182  AAGTTCTAGGGCAGAGTCACCATGACCGCAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGGGCCTGACATCTGACGACACGGCC  271
V  94.5% (274/290)  IGHV1-18*04  187  ...C..C....................A......................................A......G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  D  G  Y  Y  D  S  S  G  Y  Y  Y  D  L  W  G  R  G  T  L  V  T  V  S  S 
                    Query_8018   272  GTGTATTACTGTGCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTCTGGGGCCGGGGAACCCTGGTCACTGTCTCCTCA  361
V  94.5% (274/290)  IGHV1-18*04  277  ...............A....----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  95.2% (20/21)    IGHD3-22*01  5    ------------------------........T............---------------------------------------------  25
J  91.3% (42/46)    IGHJ2*01     8    ---------------------------------------------....T...T...........T..C.....................  52

                                       
                                       
                    Query_8018   362  G  362
J  91.3% (42/46)    IGHJ2*01     53   .  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_317441

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           311     4e-87
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GAGCC	TATTACTATGATGGTAGTG	ACTTTTATTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGAGCCTATTACTATGATGGTAGTGACTTTTATTGGTACTTTGACTAC	ARGAYYYDGSDFYWYFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	224	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  R  F  D  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8019   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCGCCTTCAGTCGTTTTGATATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGG  90
V  90.0% (224/249)  IGHV3-33*01  47   ...................................A........A.C.A..GC................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  D  T  S  K  F  Y  A  D  S  V  K  G  R  F  T  T  S  R  D  N  A  
                    Query_8019   91   AGTGGGTGGCTGTCATCTGGTATGACGACACTAGTAAGTTCTACGCTGACTCCGTGAAGGGCCGATTCACCACCTCCAGAGACAACGCCA  180
V  90.0% (224/249)  IGHV3-33*01  137  ..........A..T..A........T.GA.G..A...A.A...T..A.........................T............TT...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  A  Y  Y  Y  D  G  
                    Query_8019   181  AGAACACCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGGAGCCTATTACTATGATGGTA  270
V  90.0% (224/249)  IGHV3-33*01  227  .......G....................C...................................G....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  94.7% (18/19)    IGHD3-22*01  2    --------------------------------------------------------------------------............A...  17

                                      IMGT--------------------->                                  
                                      S  D  F  Y  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8019   271  GTGACTTTTATTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  94.7% (18/19)    IGHD3-22*01  18   ...---------------------------------------------------------  20
J  100.0% (46/46)   IGHJ4*02     3    --------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_94259

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           386     1e-109
IGHD1-26*01                                                                                           12.2    31    
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATAT	GTGGGA	AGGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATATGTGGGAAGGTACTACTTTGACTAC	AREYVGRYYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	249	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_8020   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  99.2% (249/251)  IGHV4-61*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  Y  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8020   91   CTGGAGTGGATTGGGTATATCTATTACAGTGGGTACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  99.2% (249/251)  IGHV4-61*01  139  .................................AG.......................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  Y  V  G  R  Y  Y 
                    Query_8020   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAATATGTGGGAAGGTACTAC  270
V  99.2% (249/251)  IGHV4-61*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-26*01  7    ---------------------------------------------------------------------------......---------  12
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8020   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_12386

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           299     2e-83
IGHD3-3*01                                                                                            35.3    4e-06
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATGGTAAAAGA	GATTTTTGGAGTGGTTTTTAT	TTAGGGTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATGGTAAAAGAGATTTTTGGAGTGGTTTTTATTTAGGGTAT	ARNGKRDFWSGFYLGY	230	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	47	4	0	92.2
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	105	9	0	92.1
CDR3-IMGT (germline)	230	235	6	6	0	0	100
Total	N/A	N/A	223	207	16	0	92.8


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  S  Y  G  M  *  W  V  R  Q  A  P  G  K  G  L  E  W  M  A  V  I  W  N  D
                    Query_8021   13   GTCTGGATTCACCTTCAGCAGTTATGGCATGTAATGGGTCCGGCAGGCTCCAGGCAAGGGGCTGGAGTGGATGGCAGTTATATGGAATGA  102
V  92.8% (207/223)  IGHV3-33*01  72   ..................T..C.........C.C........C...........................G..............T....  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  N  K  S  T  L  Y  L  Q  M  D
                    Query_8021   103  TGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATAACAAGAGCACGCTCTATCTGCAAATGGA  192
V  92.8% (207/223)  IGHV3-33*01  162  ..............................................A..............TC.....A......G............A.  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-------------------CDR3-IMGT------------------>     
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  N  G  K  R  D  F  W  S  G  F  Y  L  G  Y  W  G
                    Query_8021   193  CAGTCTGAGGGCCGAGGACACGGCTGTGTATTATTGTGCGAGAAATGGTAAAAGAGATTTTTGGAGTGGTTTTTATTTAGGGTATTGGGG  282
V  92.8% (207/223)  IGHV3-33*01  252  ...C.....A.......................C.........-----------------------------------------------  294
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  95.2% (20/21)    IGHD3-3*01   8    -------------------------------------------------------................A....--------------  28
J  97.1% (33/34)    IGHJ4*02     15   -------------------------------------------------------------------------------------.....  19

                                                                   
                                        Q  G  A  L  V  T  V  S  S  
                    Query_8021   283  CCAGGGAGCCCTGGTCACCGTCTCCTCAG  311
J  97.1% (33/34)    IGHJ4*02     20   .......A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_108041

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           380     1e-107
IGHD5-12*01                                                                                           14.1    8.2   
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGA	TGGCTAC	AATCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGGCTACAATCCTTACTTTGACTAC	ARDDGYNPYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	247	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8022   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGCTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (247/251)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  L  I  D  T  S 
                    Query_8022   91   CTGGAGTGGATTGGCTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATTAATAGACACGTCT  180
V  98.4% (247/251)  IGHV4-31*03  139  ..............G.............................................................C.G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  D  G  Y  N  P  Y 
                    Query_8022   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGATGGCTACAATCCTTAC  270
V  98.4% (247/251)  IGHV4-31*03  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD5-12*01  11   --------------------------------------------------------------------------.......---------  17
J  100.0% (46/46)   IGHJ4*02     3    ---------------------------------------------------------------------------------------...  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8022   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (46/46)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_12384

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD6-19*01                                                                                           21.8    0.041
IGHJ5*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTCCCGC	GTATAGTAGTGGCT	ACGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTCCCGCGTATAGTAGTGGCTACGGCTGGTTCGGCTCC	ARDSPAYSSGYGWFGS	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  N  T  Y  Y  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_8023   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAATACTTACTACTGGAGTTGGATCCGGCAGACCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   ......................................C.G..G............C............C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_8023   91   TGGATTGGTTATATCTATTACACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G.............G.....G...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  T  L  R  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  D  S  P  A  Y  S  S  G  Y 
                    Query_8023   181  CAGTTCTCCCTGACGCTGAGGTCTGTGAGCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGATTCTCCCGCGTATAGTAGTGGCTAC  270
V  94.3% (231/245)  IGHV4-59*01  229  .............A......C.......C..................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  3    --------------------------------------------------------------------------......C.......--  16

                                      -------------->                                  
                                       G  W  F  G  S  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_8023   271  GGCTGGTTCGGCTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  319
J  93.6% (44/47)    IGHJ5*01     5    --........A............A.....................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_108043

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           344     6e-97
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CT	ACTGGGGA	TTTGGAA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTACTGGGGATTTGGAATACTTTGACTCC	ATTGDLEYFDS	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  R  S  Y  T  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8024   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCGTTTCAGAAGCTATACCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.7% (233/246)  IGHV3-21*01  47   ...................................ACC.....T.......G.....A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  M  K  G  R  F  S  I  T  R  D  N  A  
                    Query_8024   91   AGTGGGTCTCATCCATTAGTAGTAGCAGTAGTTACATATACTACGCAGACTCAATGAAGGGCCGATTCTCCATCACCAGAGACAACGCCA  180
V  94.7% (233/246)  IGHV3-21*01  137  .........................T...........................G..............A.....T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  T  T  G  D  L  E  Y  F  
                    Query_8024   181  AGAACTCACTCTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGACTACTGGGGATTTGGAATACTTTG  270
V  94.7% (233/246)  IGHV3-21*01  227  ..........G.............................G...........G.............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD7-27*01  4    --------------------------------------------------------------------........--------------  11
J  95.7% (44/46)    IGHJ4*02     3    -----------------------------------------------------------------------------------.......  9

                                      ---->                                  
                                      D  S  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_8024   271  ACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  309
J  95.7% (44/46)    IGHJ4*02     10   ...A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_108044

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD6-13*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	ARHRYLGPRQQATENDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  Q  G  S  G  Y  T  F  S  T  Y
                    Query_8025   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTTCCACCTA  90
V  95.9% (279/291)  IGHV5-51*01  6    ..........................................G..................A...............G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  V  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_8025   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGTTGGGAGTCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G.....................................A....GA.......................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8025   181  GTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  ......................A...........................................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_8025   271  CATGTATTACTGTGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  95.9% (279/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-13*01  8    ---------------------------------------.......--------------------------------------------  14
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_8025   361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_108045

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         297     8e-83
IGHD3-22*01                                                                                           46.8    1e-09
IGHJ3*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTCCGGACCCCGGGA	TACTATGATAGTAGTGGTTATTATTAC	GGTCGGA	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGGACCCCGGGATACTATGATAGTAGTGGTTATTATTACGGTCGGACTTTTGATGTC	ARVRTPGYYDSSGYYYGRTFDV	241	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	218	28	0	88.6


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  F  S  I  N  T  I  H  F  W  G  W  V  R  Q  P  P  G  K  G  L 
                    Query_8026     1    ACCCTGTCCCTCACCTGCGCTGTTTCTGGTTTCTCCATCAACACTATTCACTTCTGGGGCTGGGTCCGGCAGCCCCCAGGGAAGGGTCTG  90
V  88.6% (218/246)  IGHV4-38-2*01  49   .......................C.......A........G..G.GG.T...A..........A......................G...  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  T  G  S  A  V  Y  N  P  A  L  K  S  R  V  T  I  S  I  D  L  S  K 
                    Query_8026     91   GAGTGGATTGGGTCTATCTATCGTACTGGGAGCGCCGTCTATAACCCGGCCCTCAAGAGTCGAGTCACCATATCAATAGACTTGTCCAAG  180
V  88.6% (218/246)  IGHV4-38-2*01  139  ............AG........A..G.......A..TA...C......T..........................G.....AC.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------------------C
                                         N  H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  T  P  G  Y  Y  D 
                    Query_8026     181  AACCACTTCTCCCTGAAACTAACCTCTGTGACCGCCGCAGACACGGCCGTATATTATTGTGCGAGAGTCCGGACCCCGGGATACTATGAT  270
V  88.6% (218/246)  IGHV4-38-2*01  229  .....G...........G..G.G...........................G.....C.........------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  96.3% (26/27)    IGHD3-22*01    5    ---------------------------------------------------------------------------------.........  13

                                        DR3-IMGT--------------------------->                                  
                                         S  S  G  Y  Y  Y  G  R  T  F  D  V  W  G  Q  G  R  M  V  T  V  S  S  
                    Query_8026     271  AGTAGTGGTTATTATTACGGTCGGACTTTTGATGTCTGGGGCCAAGGGAGAATGGTCACCGTCTCTTCAG  340
D  96.3% (26/27)    IGHD3-22*01    14   ..............C...----------------------------------------------------  31
J  97.8% (44/45)    IGHJ3*01       6    -------------------------........................C....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_12380

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-72*01                                                                                           350     8e-99
IGHD2-21*02                                                                                           12.2    32   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-72*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGGA	A	GTGGTAACT	CCCGCACGGGAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTGGAAGTGGTAACTCCCGCACGGGAATTGACTAC	VGSGNSRTGIDY	249	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	105	9	0	92.1
CDR3-IMGT (germline)	249	254	6	4	2	0	66.7
Total	N/A	N/A	254	239	15	0	94.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_8027   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTCAGTGACCACTACATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.1% (239/254)  IGHV3-72*01  47   ........................C.................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  S  R  D  K  A  N  G  Y  T  T  E  Y  A  A  S  V  K  G  R  F  I  I  S  R  D  
                    Query_8027   91   AGTGGGTTGGCCGTAGTAGAGACAAAGCTAACGGTTACACCACAGAGTACGCCGCGTCTGTGAAAGGCAGATTCATTATCTCAAGAGATG  180
V  94.1% (239/254)  IGHV3-72*01  137  ...............C....A...........A.............A............................CC.............  226
                                      E  W  V  G  R  T  R  N  K  A  N  S  Y  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------CDR3-IMG
                                      D  S  K  S  S  L  H  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  V  G  S  G  N  S  R  
                    Query_8027   181  ATTCAAAGAGCTCACTGCATCTGCAAATGAACAGCCTGAAAAGCGAGGACACGGCCGTCTACTATTGTGTTGGAAGTGGTAACTCCCGCA  270
V  94.1% (239/254)  IGHV3-72*01  227  .........A.......T........................C...............G..T..C....C.A..----------------  300
                                      D  S  K  N  S  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R                 
D  88.9% (8/9)      IGHD2-21*02  12   ---------------------------------------------------------------------------.....G...------  20

                                      T------------>                                  
                                      T  G  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8027   271  CGGGAATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (42/42)   IGHJ4*02     7    ------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_108047

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         313     2e-87
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCG	TGTAGTTGTTCCAGCT	AATATCAAAATTTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATCGTGTAGTTGTTCCAGCTAATATCAAAATTTCCTACGGAATGGACGTC	ARDRVVVPANIKISYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	225	25	0	90


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  E  A  S  G  F  I  F  S  T  Y  H  M  H  W  V  R  Q  T  P  G  K  G  L  
                    Query_8028     1    GGTCCCTGAGACTCTCCTGTGAAGCGTCTGGATTCATCTTCAGTACCTATCATATGCACTGGGTCCGCCAGACTCCAGGCAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-30-3*01  47   .....................C...C..........C........G....GC...................G..................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  L  I  S  Y  D  G  S  N  T  Y  F  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8028     91   AGTGGGTGGCACTTATCTCCTATGATGGAAGCAACACATACTTCACAGACTCCGTAAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  90.0% (225/250)  IGHV3-30-3*01  137  ...........G....A..A..............T.A.....A.G..........G..................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                        K  N  T  L  Y  L  H  M  D  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  D  R  V  V  V  P  A  
                    Query_8028     181  AGAATACACTTTATCTACATATGGACAGCCTGAGACCTGAAGACACGGCTGTCTATTACTGTGCCAGAGATCGTGTAGTTGTTCCAGCTA  270
V  90.0% (225/250)  IGHV3-30-3*01  227  ....C..G..G.....G..A...A...........G....G...........G...........G.....--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD2-2*01     8    -------------------------------------------------------------------------......A..A......-  23

                                        -IMGT----------------------->                                 
                                        N  I  K  I  S  Y  G  M  D  V  W  G  P  G  T  T  V  A  V  S  S 
                    Query_8028     271  ATATCAAAATTTCCTACGGAATGGACGTCTGGGGCCCAGGGACCACGGTCGCCGTCTCCTCA  332
J  93.9% (46/49)    IGHJ6*02       14   -------------......T................A.............A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_188529

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           353     9e-100
IGHD3-3*01                                                                                            21.8    0.041 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGCCTCGTGCCTG	GGAGTGGTTAT	GAAGCCATACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGCCTCGTGCCTGGGAGTGGTTATGAAGCCATACCTGACTAC	AKSLVPGSGYEAIPDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  A  M  T  W  V  R  Q  A  P  G  R  G  L  
                    Query_8029   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTTAGCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  95.6% (237/248)  IGHV3-23*01  47   ......................................T..................G.......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  D  T  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8029   91   AATGGGTCTCAGGTATTAGTGGTAGTGGTGGTGACACATACTACGCAGACGCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.6% (237/248)  IGHV3-23*01  137  .G..........C...................AG................T.......................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  F  C  A  K  S  L  V  P  G  S  G  
                    Query_8029   181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTATATTTCTGTGCGAAAAGCCTCGTGCCTGGGAGTGGTT  270
V  95.6% (237/248)  IGHV3-23*01  227  ...A................................C....................A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD3-3*01   15   ---------------------------------------------------------------------------------.........  23

                                      T------------------>                                
                                      Y  E  A  I  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8029   271  ATGAAGCCATACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  322
D  100.0% (11/11)   IGHD3-3*01   24   ..--------------------------------------------------  25
J  100.0% (39/39)   IGHJ4*02     8    -------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_31369

Length=417
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           363     2e-102
IGHD2-21*02                                                                                           14.1    10    
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGCAC	TGTAGTGCTGACT	AATAGGCGCGGACTTACGGGGCCAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCGCACTGTAGTGCTGACTAATAGGCGCGGACTTACGGGGCCAGACTACCACTACTACGGCATGGACGTC	ARERTVVLTNRRGLTGPDYHYYGMDV	284	361	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	16	8	0	66.7
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	261	29	0	90


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  T  A  S  G  Y  T  F  S  S  Y 
                    Query_8030   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCACGGCCTCTGGGTACACCTTTAGCAGTTAT  91
V  90.0% (261/290)  IGHV1-18*01  7    .................................................A...........A...T.....T..........C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  V  S  A  K  N  G  D  T  K  Y  E  Q 
                    Query_8030   92   AGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGGTCAGCGCCAAGAACGGAGACACCAAATATGAGCAG  181
V  90.0% (261/290)  IGHV1-18*01  97   G.......C.............................................A.......TT.C..T..TA....A..C....CA...  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  D  R  I  F  L  T  T  E  T  S  T  S  T  A  Y  M  E  V  T  S  L  R  S  D  D  T  A 
                    Query_8030   182  AAGTTCCAGGACAGAATCTTCCTGACCACAGAGACATCCACGAGCACAGCCTACATGGAGGTGACGAGCCTGAGATCTGACGACACGGCC  271
V  90.0% (261/290)  IGHV1-18*01  187  ...C......G....G..AC.A..........C...........................C...G.........................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------------------CDR3-IMGT--------------------------------->
                                       V  Y  Y  C  A  R  E  R  T  V  V  L  T  N  R  R  G  L  T  G  P  D  Y  H  Y  Y  G  M  D  V 
                    Query_8030   272  GTCTATTACTGTGCGAGAGAGCGCACTGTAGTGCTGACTAATAGGCGCGGACTTACGGGGCCAGACTACCACTACTACGGCATGGACGTC  361
V  90.0% (261/290)  IGHV1-18*01  277  ..G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  84.6% (11/13)    IGHD2-21*02  8    --------------------------...G...G.....---------------------------------------------------  20
J  94.9% (56/59)    IGHJ6*02     4    ----------------------------------------------------------------.....T..........T.........  29

                                                                       
                                       W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8030   362  TGGGGCCAAGGGACCACTGTCACCGTCTCCTCA  394
J  94.9% (56/59)    IGHJ6*02     30   .................G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40919688


Query= Query_188522

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           12.2    30    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAAAGTCAGGC	CGGGGA	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAAGTCAGGCCGGGGATTTGACTTC	AKKSGRGFDF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	238	8	0	96.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8031   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.7% (238/246)  IGHV3-48*03  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  I  I  Y  Y  A  D  S  V  K  G  R  F  A  I  S  R  D  Y  S  
                    Query_8031   91   AGTGGGTTTCATACATTAGTAGTAGTGGTAGTATCATATATTACGCAGACTCTGTGAAGGGCCGATTCGCCATCTCCAGAGACTACTCCA  180
V  96.7% (238/246)  IGHV3-48*03  137  .................................C......C...........................A..............A..G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  K  S  G  R  G  F  D  
                    Query_8031   181  AAAACTCTCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAAAAAGTCAGGCCGGGGATTTGACT  270
V  96.7% (238/246)  IGHV3-48*03  227  .G.....A..........................................................------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-10*01  15   -----------------------------------------------------------------------------......-------  20
J  97.6% (40/41)    IGHJ4*02     6    -----------------------------------------------------------------------------------.......  12

                                      ->                                
                                      F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8031   271  TCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  304
J  97.6% (40/41)    IGHJ4*02     13   A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_188521

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            382     4e-108
IGHD1-26*01                                                                                           14.1    9.1   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCG	GTGGGAG	TCACCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATGCGGTGGGAGTCACCCCCTACTTTGACTAC	ARDAVGVTPYFDY	273	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	158	27	26	1	0	96.3
FR3-IMGT	159	272	114	103	11	0	90.4
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	280	262	18	0	93.6


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  L  V  S  R  N  G  A  A  W  N  W  
                    Query_8032   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACATGTGCCATCTCCGGGGACCTTGTCTCTAGGAACGGTGCTGCTTGGAATTGGA  90
V  93.6% (262/280)  IGHV6-1*01   26   .....................................C..................AG.........C...A.............C....  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  L  R  
                    Query_8032   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATATTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTCTGAGAG  180
V  93.6% (262/280)  IGHV6-1*01   116  ..............................................C....................................G...A.A  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      G  R  I  I  I  S  P  D  T  S  N  N  L  F  S  L  H  L  N  S  V  T  P  E  D  T  A  M  Y  Y  
                    Query_8032   181  GTCGAATAATCATCAGCCCAGACACTTCCAACAACCTCTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTATGTATTACT  270
V  93.6% (262/280)  IGHV6-1*01   206  .........C.....A.........A.....G....AG...........G..............................G.........  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><--------------CDR3-IMGT-------------->                                  
                                      C  A  R  D  A  V  G  V  T  P  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_8032   271  GTGCAAGAGATGCGGTGGGAGTCACCCCCTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  345
V  93.6% (262/280)  IGHV6-1*01   296  ..........-----------------------------------------------------------------  305
                                      C  A  R                                                                    
D  100.0% (7/7)     IGHD1-26*01  7    --------------.......------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ----------------------------.........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_188527

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           397     8e-113
IGHD3-10*01                                                                                           12.2    37    
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TCGGGG	TCTTTGGTCCGGCGAACAGGGA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGGGTCTTTGGTCCGGCGAACAGGGATACTTTGACTTC	ARDRGLWSGEQGYFDF	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	102	12	0	89.5
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	275	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  L  K  V  S  C  K  A  S  G  G  A  F  S 
                    Query_8033   3    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGCTGAAGGTCTCCTGCAAGGCTTCTGGAGGCGCCTTCAGC  92
V  92.9% (275/296)  IGHV1-69*01  1    .....G.................G...........................G.............................A........  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  A  V  S  W  V  R  Q  A  P  G  H  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  N  Y 
                    Query_8033   93   ACCTATGCTGTCAGCTGGGTGCGACAGGCCCCTGGACACGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACCACAAACTAC  182
V  92.9% (275/296)  IGHV1-69*01  91   .G.......A............................A.........................................AG........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  N  D  F  R  G  R  L  T  I  I  A  D  G  S  T  S  T  A  Y  M  E  L  T  S  L  R  S  E  D 
                    Query_8033   183  GCAAATGACTTCCGGGGCAGACTCACGATTATCGCGGACGGATCCACGAGCACAGCCTACATGGAGCTGACCAGCCTCAGATCTGAGGAC  272
V  92.9% (275/296)  IGHV1-69*01  181  ...C.GA.G....A.......G.........C........A.............................G......G............  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  D  R  G  L  W  S  G  E  Q  G  Y  F  D  F  W  G  Q  G  T  L  V  T 
                    Query_8033   273  ACGGCCGTCTATTATTGTGCGAGAGATCGGGGTCTTTGGTCCGGCGAACAGGGATACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACC  362
V  92.9% (275/296)  IGHV1-69*01  271  ........G.....C...........----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------......----------------------------------------------------------  19
J  97.8% (45/46)    IGHJ4*02     3    ------------------------------------------------------..........A.........................  38

                                                
                                       V  S  S  
                    Query_8033   363  GTCTCCTCAG  372
J  97.8% (45/46)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_188526

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         297     7e-83
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	GGAGTCGTAATTAT	CATGGGAATTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGAGTCGTAATTATCATGGGAATTTCTACTTCGGCCAC	ARGSRNYHGNFYFGH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	220	30	0	88


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  D  S  V  Y  Y  S  L  N  W  I  R  Q  T  P  L  K  G 
                    Query_8034     1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCATCGACAGTGTTTACTACTCCTTAAACTGGATCCGGCAGACACCACTGAAGGGC  90
V  88.0% (220/250)  IGHV4-30-2*01  49   .......................C...............AG.....G.GGT.......GG.G.............C.....GG.......  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Q  H  S  G  A  T  Y  Y  N  P  S  L  E  S  R  V  S  L  S  V  D  R  S 
                    Query_8034     91   CTGGAGTGGATTGGCTACATCCAGCATTCTGGGGCCACCTACTACAACCCGTCCCTCGAGAGTCGGGTCTCCCTTTCAGTAGACCGGTCC  180
V  88.0% (220/250)  IGHV4-30-2*01  139  ..............G......T.T...AG....AG......................A.......A...A..A.A.........A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  S  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  R  N  Y  H  G 
                    Query_8034     181  AAGAGCCAGTTCTCCCTGAGGCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGAGGGAGTCGTAATTATCATGGG  270
V  88.0% (220/250)  IGHV4-30-2*01  229  ....A..............A.....G...........................G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  85.7% (12/14)    IGHD3-3*01     15   ----------------------------------------------------------------------.....G..T.....------  28

                                        ----------------->                                  
                                         N  F  Y  F  G  H  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_8034     271  AATTTCTACTTCGGCCACTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTCAG  322
J  89.4% (42/47)    IGHJ4*02       2    -----......T.A.T...............C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_188525

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           338     5e-95
IGHD3-10*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGGTTCGAGCAGTTATT	CCTTCGCGCG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTTCGAGCAGTTATTCCTTCGCGCGCTACGGTATGGACGTC	ARDGSSSYSFARYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8035   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACTTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-48*03  47   ....................G................C....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  G  G  G  R  T  I  Y  Y  A  D  S  V  K  G  R  F  T  L  S  R  D  N  T  
                    Query_8035   91   AGTGGGTTTCATACATTAGTGGCGGTGGAAGAACCATTTACTACGCAGACTCTGTGAAGGGCCGATTCACCTTGTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-48*03  137  ....................A.TA....T..T.....A.................................A.C............G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  T  A  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  S  S  Y  S  
                    Query_8035   181  AGACCGCTCTGCATCTACAAATGAACAGCCTGAGAGCCGAAGACACGGCTGTTTATTACTGTGCGAGAGATGGTTCGAGCAGTTATTCCT  270
V  93.2% (233/250)  IGHV3-48*03  227  ...A.T.A...T....G.......................G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.2% (15/17)    IGHD3-10*01  10   ----------------------------------------------------------------------.......G.G.......---  26

                                      GT-------------------->                                 
                                      F  A  R  Y  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_8035   271  TCGCGCGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  326
J  98.0% (48/49)    IGHJ6*02     14   -------......................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_188524

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD3-16*01                                                                                           10.3    114   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGAAAGA	GGGGG	CTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC	ARDQKEGAPDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	241	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8036   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (241/245)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8036   91   TGGATTGGGTATATCTTTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (241/245)  IGHV4-59*01  139  ................A.........................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  K  E  G  A  P  D  Y 
                    Query_8036   181  CAATTCTCCCTGAAACTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC  270
V  98.4% (241/245)  IGHV4-59*01  229  ..G...........G..................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   --------------------------------------------------------------------------.....-----------  22
J  97.6% (40/41)    IGHJ4*02     8    -----------------------------------------------------------------------------------.......  14

                                                                        
                                       W  G  R  G  T  L  V  T  V  S  S  
                    Query_8036   271  TGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  304
J  97.6% (40/41)    IGHJ4*02     15   .......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_292528

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGTACCA	N/A	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGTACCAACTGCTACTACCAAATGGACGTC	ARVDCSSTNCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_8037   1    ACCCTGTCCCTCACTTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ..............C..............T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_8037   91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  N  C  Y 
                    Query_8037   181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTATTGTGCGAGAGTGGACTGTAGTAGTACCAACTGCTAC  270
V  90.6% (221/244)  IGHV4-59*01  229  C..............................CT..............G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD2-2*01   8    ---------------------------------------------------------------------.............--------  20
J  89.3% (50/56)    IGHJ6*02     7    ----------------------------------------------------------------------------------...A....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  T  V  I  V  S  S 
                    Query_8037   271  TACCAAATGGACGTCTGGGGCCTAGGGACCACGGTCATCGTCTCCTCA  318
J  89.3% (50/56)    IGHJ6*02     15   ...GGT................A..............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_144529

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         324     8e-91
IGHD3-9*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTGCAGATCACC	ATATTTTGACTGGTTA	CTTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCTGCAGATCACCATATTTTGACTGGTTACTTTACTAC	ASCRSPYFDWLLYY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  S  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8038     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCCTTCAGCAGCTCTGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGG  90
V  91.9% (227/247)  IGHV3-30-3*01  47   ...................................A.......T....A....................................G....  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  I  I  S  H  D  G  N  E  K  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_8038     91   AGTGGGTGGCAATCATTTCACATGATGGAAACGAAAAGTACTACGCAGATTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  91.9% (227/247)  IGHV3-30-3*01  137  ...........G.T..A...T.........G.A.T..A...........C.......A................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                        N  N  T  L  Y  V  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  S  C  R  S  P  Y  F  D  
                    Query_8038     181  ACAATACGCTGTATGTGCAAATGAACAGCTTGAGAGCTGAGGACACGGCTGTGTACTTCTGTGCGAGCTGCAGATCACCATATTTTGACT  270
V  91.9% (227/247)  IGHV3-30-3*01  227  .G..C.........C..............C.........................T.A.........-----------------------  293
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (16/16)   IGHD3-9*01     9    -------------------------------------------------------------------------------...........  19

                                        ------------->                                  
                                        W  L  L  Y  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_8038     271  GGTTACTTTACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
D  100.0% (16/16)   IGHD3-9*01     20   .....-------------------------------------------  24
J  97.4% (38/39)    IGHJ4*02       10   ---------..................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_235214

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            300     8e-84
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTAGTAACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTAGTAACACCTGGTACTCGGGGTTTTGATTCC	AGHLVTPGTRGFDS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	56	27	24	3	0	88.9
FR2-IMGT	57	107	51	46	5	0	90.2
CDR2-IMGT	108	128	21	15	6	0	71.4
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	220	28	0	88.7


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_8039   1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCACCACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCTCCCGGGAAGGGTC  90
V  88.7% (220/248)  IGHV4-4*01   47   ..A.....TCC...A...........................G..GT.............................C..A........G.  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  A  E  I  R  H  G  G  P  T  N  Y  N  P  A  L  E  S  R  V  T  I  S  V  D  K  S  
                    Query_8039   91   TGGAGTGGATAGCGGAAATCCGTCATGGTGGACCCACCAACTACAACCCGGCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCA  180
V  88.7% (220/248)  IGHV4-4*01   137  ..........T.G.......TA....A....GAG................T.....A.................................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      N  N  Q  F  S  L  S  L  S  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  
                    Query_8039   181  ACAACCAATTCTCCCTGAGCCTGAGCTCTCTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATCTAGTAACACCTGGTACTC  270
V  88.7% (220/248)  IGHV4-4*01   227  .G.....G..........AG.........G...........................G.......A..----------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                       
D  100.0% (7/7)     IGHD6-13*01  15   ---------------------------------------------------------------------------------.......--  21

                                      ------------->                                  
                                      R  G  F  D  S  W  G  Q  G  T  L  V  T  A  S  S  
                    Query_8039   271  GGGGTTTTGATTCCTGGGGCCAGGGAACCCTGGTCACCGCCTCCTCAG  318
J  93.0% (40/43)    IGHJ4*02     6    -----.....C.A..........................T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_235216

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            352     3e-99
IGHD1-26*01                                                                                           12.2    36   
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	N/A	GGGAGC	CGACATAGCACAAATGGAGCATTGACAGGGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGGAGCCGACATAGCACAAATGGAGCATTGACAGGGAATGCTTTTCATATC	AGSRHSTNGALTGNAFHI	273	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	80	30	29	1	0	96.7
FR2-IMGT	81	131	51	47	4	0	92.2
CDR2-IMGT	132	158	27	22	5	0	81.5
FR3-IMGT	159	272	114	101	13	0	88.6
CDR3-IMGT (germline)	273	275	3	3	0	0	100
Total	N/A	N/A	275	250	25	0	90.9


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  V  V  S  G  D  S  V  S  S  N  S  A  A  W  G  W  
                    Query_8040   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGTCGTCTCCGGGGACAGTGTCTCTAGCAACAGCGCTGCTTGGGGCTGGA  90
V  90.9% (250/275)  IGHV6-1*01   26   ..........................................C.A............................T.........AA.....  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  A  R  T  Y  Y  T  S  Q  W  I  H  D  Y  E  D  S  V  K  
                    Query_8040   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGCTAGGACATACTACACGTCCCAGTGGATTCATGATTATGAAGATTCTGTGAAAA  180
V  90.9% (250/275)  IGHV6-1*01   116  ....................................GA.............G....A.....TA.A.........C..TA..........  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  N  V  N  A  D  T  S  K  N  Q  I  S  L  Q  L  T  S  V  T  P  E  D  T  A  M  Y  F  
                    Query_8040   181  GTCGAATAAATGTCAACGCAGACACATCCAAGAACCAGATCTCCCTGCAGTTGACCTCTGTGACTCCCGAGGACACGGCTATGTACTTCT  270
V  90.9% (250/275)  IGHV6-1*01   206  .........CCA.....C....................T...........C...A.........................G....T.A..  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------------------CDR3-IMGT--------------------->                                  
                                      C  A  G  S  R  H  S  T  N  G  A  L  T  G  N  A  F  H  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8040   271  GTGCAGGGAGCCGACATAGCACAAATGGAGCATTGACAGGGAATGCTTTTCATATCTGGGGCCAAGGGACAATGGTCACCGTGTCTTCAG  360
V  90.9% (250/275)  IGHV6-1*01   296  .....-------------------------------------------------------------------------------------  300
                                      C  A                                                                                      
D  100.0% (6/6)     IGHD1-26*01  9    -----......-------------------------------------------------------------------------------  14
J  95.8% (46/48)    IGHJ3*02     3    ------------------------------------------........G...............................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_235217

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            302     3e-84
IGHD2-21*01                                                                                           10.3    112  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCG	ATTCC	GTGCCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGATTCCGTGCCCCCTAC	RGDSVPPT	240	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	26	27	25	1	1	92.6
CDR1-IMGT	27	53	27	20	7	0	74.1
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	245	221	23	1	90.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S   S  P  A  V  S  L  M  A  P  S  T  L  V  A  G  G  F  G  S  A  S  P  Q  G  R  G  W
                    Query_8041   1    ACCCTGTCC-TCACCTGCGGTGTCTCTGATGGCTCCATCGACTCTAGTGGCTGGTGGATTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  89
V  90.2% (221/245)  IGHV4-4*02   49   .........C.........C........G..........AG.AG....AA........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                        S  G  L  G  K  P  I  T  L  G  P  P  T  T  T  R  P  S  R  V  E  S  P  Y  H  *  T  S  P  R
                    Query_8041   90   GAGTGGATTGGGGAAACCCATCACACTGGGACCACCAACTACAACTCGTCCCTCCAGAGTCGAGTCACCATATCACTAGACAAGTCCAAG  179
V  90.2% (221/245)  IGHV4-4*02   139  ................T.T....T.G.....G.............C........A....................G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------CDR3-IMGT------>      
                                        I  S  S  P  *  T  *  T  L  *  P  P  R  T  Q  P  C  I  I  V  R  G  D  S  V  P  P  T  G  A
                    Query_8041   180  AATCAGTTCTCCCTAAACCTGAACTCTGTGACCGCCGCGGACACAGCCGTGTATTATTGTGCGAGGCGATTCCGTGCCCCCTACTGGGGC  269
V  90.2% (221/245)  IGHV4-4*02   229  ..C...........G..G....G.....................G...........C........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (5/5)     IGHD2-21*01  24   --------------------------------------------------------------------.....-----------------  28
J  97.2% (35/36)    IGHJ4*02     11   --------------------------------------------------------------------------------..........  20

                                                                
                                        R  E  S  W  S  P  S  P  
                    Query_8041   270  CAGGGAATCCTGGTCACCGTCTCCTC  295
J  97.2% (35/36)    IGHJ4*02     21   .......C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_235210

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           339     2e-95
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCTCGTTTATG	ATGGTTCGGGGAGT	CCTCCCGAAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTCGTTTATGATGGTTCGGGGAGTCCTCCCGAAGGACTAC	ARLSFMMVRGVLPKDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  V  N  S  G  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_8042   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCGTCAACAGTGGTGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  93.6% (233/249)  IGHV4-61*08  49   ..................A.....................G...........A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  T  G  G  A  N  Y  N  P  S  L  K  S  R  V  S  I  S  I  D  T  S 
                    Query_8042   91   CTCGAGTGGATTGGATATATCTATTACACTGGGGGCGCCAACTACAATCCCTCCCTCAAGAGTCGAGTCAGCATATCAATAGACACGTCC  180
V  93.6% (233/249)  IGHV4-61*08  139  ..G...........G.............G....A..A..........C......................C.......G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       E  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  S  F  M  M  V  R 
                    Query_8042   181  GAGAATCAGTTCTCCCTGAAGCTGAGTTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGCGAGACTCTCGTTTATGATGGTTCGG  270
V  93.6% (233/249)  IGHV4-61*08  229  A....C....................C..........................G..T............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (14/14)   IGHD3-10*01  9    ---------------------------------------------------------------------------------.........  17

                                      GT------------------>                                  
                                       G  V  L  P  K  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8042   271  GGAGTCCTCCCGAAGGACTACTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  325
D  100.0% (14/14)   IGHD3-10*01  18   .....--------------------------------------------------  22
J  97.5% (39/40)    IGHJ4*02     9    ---------------..........................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_235211

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           260     1e-71
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	93	21	0	81.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	205	39	0	84


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_8043   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  84.0% (205/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_8043   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  84.0% (205/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_8043   181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACGTAT  270
V  84.0% (205/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_8043   271  GTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    ---------------------------------...G....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_235212

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           321     7e-90
IGHD2-21*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TAATCCCGACGA	TGGTGGTG	CCTACAATTATCCTAACG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAATCCCGACGATGGTGGTGCCTACAATTATCCTAACGAC	ASNPDDGGAYNYPND	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8044   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTTCCTATGGCATGCACTGGGTCCGCCAGGCTCCTGGCAAGGGGCTGG  90
V  91.5% (226/247)  IGHV3-33*01  47   ............................................AG..............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  F  E  D  G  S  E  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8044   91   AGTGGGTGGCTTTTATATTCGAAGATGGAAGTGAAACATACTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGGGACAATTCCA  180
V  91.5% (226/247)  IGHV3-33*01  137  ..........AG......GGT.T.........A.T.A........C.................................A..........  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  T  L  Y  L  H  L  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  S  N  P  D  D  G  G  A  
                    Query_8044   181  GGAACACACTCTATCTGCATCTGAACGGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGTAATCCCGACGATGGTGGTGCCT  270
V  91.5% (226/247)  IGHV3-33*01  227  A......G..G........AA.....A.........................G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD2-21*01  10   -------------------------------------------------------------------------------........---  17

                                      ---------------->                                  
                                      Y  N  Y  P  N  D  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8044   271  ACAATTATCCTAACGACTGGGGCCGGGGAACCCTGGTCACCGTCTCTTCAG  321
J  94.4% (34/36)    IGHJ4*02     13   ---------------.........A.....................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_235213

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACAGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	268	18	0	93.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_8045   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  93.7% (268/286)  IGHV5-51*01  6    ..............................A...................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  Q  G  L  E  L  M  G  L  I  Y  P  G  D  S  D  T  W  Y  S  P
                    Query_8045   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCAAGGCCTGGAGTTGATGGGGCTCATCTATCCTGGTGACTCTGATACCTGGTACAGTCC  180
V  93.7% (268/286)  IGHV5-51*01  96   ......................A........A............G.......A..........................A.A.....C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  T  S  A  Y  L  Q  W  T  T  L  K  A  S  D  T  A
                    Query_8045   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCACCTCCGCCTACCTGCAGTGGACCACCCTGAAGGCCTCGGACACCGC  270
V  93.7% (268/286)  IGHV5-51*01  186  ....................C...................A...G.A..................G..G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8045   271  CATTTACTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACAGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  353
V  93.7% (268/286)  IGHV5-51*01  276  ...G..T.........-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------.................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_235218

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	70	4	0	94.6
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	111	3	0	97.4
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	282	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_8046   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGTTTTACCA  91
V  95.6% (282/295)  IGHV5-51*01  2    .................................A......C..G..........................T...........C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  
                    Query_8046   92   GCTATTGGATCGGCTGGGTCCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGACACCAGATACA  181
V  95.6% (282/295)  IGHV5-51*01  92   ....C..............G....................C...............A......................T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  T  G  T  A  Y  L  Q  W  S  S  L  K  S  S  D  
                    Query_8046   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCACCGGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGTCCTCGGACA  271
V  95.6% (282/295)  IGHV5-51*01  182  .............................................T.A................................G.........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  M  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  
                    Query_8046   272  CCGCCATGTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  361
V  95.6% (282/295)  IGHV5-51*01  272  .........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  85.7% (12/14)    IGHD1-26*01  4    ---------------------------------...G....A.....-------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------------......TA................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_8046   362  CGGTCACCGTCTCGTCA  378
J  94.7% (54/57)    IGHJ6*02     46   .............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_235219

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8047   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_8047   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_8047   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_8047   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_194570

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           344     6e-97
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGTCGTC	ATTACGATTTTTGGAGTGGTT	TTGACGCCACGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGTCGTCATTACGATTTTTGGAGTGGTTTTGACGCCACGTACTACTTTGACTTC	ARGRHYDFWSGFDATYYFDF	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  H  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8048   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTCACTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*08  49   .............................................T...A........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  D  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_8048   91   TGGATTGGGTATATCGACTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAGAGC  180
V  95.5% (231/242)  IGHV4-59*08  139  ...............T.T...............A..................................A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       H  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  H  Y  D  F  W  S  G 
                    Query_8048   181  CACTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTTTATTACTGTGCGAGGGGTCGTCATTACGATTTTTGGAGTGGT  270
V  95.5% (231/242)  IGHV4-59*08  229  ..G...........G....G...........................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (21/21)   IGHD3-3*01   3    ----------------------------------------------------------------------....................  22

                                      GT------------------------>                                  
                                       F  D  A  T  Y  Y  F  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_8048   271  TTTGACGCCACGTACTACTTTGACTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  331
D  100.0% (21/21)   IGHD3-3*01   23   .------------------------------------------------------------  23
J  95.8% (46/48)    IGHJ4*02     1    -------------............A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_340377

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         300     9e-84
IGHD3-9*01                                                                                            14.1    8.7  
IGHJ2*01                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGACCGATAC	TGACTGG	GGTGGTCACACAGGGCTCTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACCGATACTGACTGGGGTGGTCACACAGGGCTCTTCTGGTACTTCGATCTC	AKTDTDWGGHTGLFWYFDL	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	218	26	0	89.3


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  V  V  S  G  Y  S  I  N  N  G  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  L 
                    Query_8049     1    ACCCTGTCCCTCACCTGCGTTGTGTCTGGTTACTCCATCAACAATGGTTACTACTGGGGCTGGCTCCGGCAGCCCCCAGGAAAGGGGCTG  90
V  89.3% (218/244)  IGHV4-38-2*01  49   ...................C...C................G..G...................A................G.........  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  V  Y  H  R  G  D  A  Y  Y  N  P  S  L  K  S  R  V  T  V  S  M  D  T  S  S 
                    Query_8049     91   GAGTGGATTGGGAGTGTCTATCATCGCGGGGACGCGTACTACAATCCGTCCCTCAAGAGTCGAGTCACCGTCTCAATGGACACGTCCAGT  180
V  89.3% (218/244)  IGHV4-38-2*01  139  ...............A........A.T...AG.A.C........C........................A.A...G.A..........AG  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                         N  Q  V  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  T  D  T  D  W  G  G  H 
                    Query_8049     181  AATCAGGTCTCCCTGAGCCTGAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAAGACCGATACTGACTGGGGTGGTCAC  270
V  89.3% (218/244)  IGHV4-38-2*01  229  ..C...T.........AG.....C...............................A........--------------------------  292
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-9*01     15   --------------------------------------------------------------------------.......---------  21

                                        MGT----------------------->                                  
                                         T  G  L  F  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8049     271  ACAGGGCTCTTCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  331
J  100.0% (50/50)   IGHJ2*01       4    -----------..................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_194572

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           338     5e-95
IGHD6-13*01                                                                                           14.1    8.6  
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGCGTTCACACTGT	CTGGTAC	GG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCGCGTTCACACTGTCTGGTACGGCTACTACGCTATGGACGTC	AKDRVHTVWYGYYAMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  D  Y  G  M  H  W  A  R  Q  A  P  G  K  G  L  
                    Query_8050   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTGACTATGGCATGCACTGGGCCCGCCAGGCTCCGGGCAAGGGGCTGC  90
V  93.2% (233/250)  IGHV3-30*18  47   ...................................A........AG.................T............A............G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  F  I  S  Y  D  E  T  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8050   91   AGTGGGTGTCATTTATATCATATGATGAAACTACTACATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCGA  180
V  93.2% (233/250)  IGHV3-30*18  137  ........G..G...............G..G..A..A...................................................C.  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  F  L  Q  L  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  R  V  H  T  V  W  
                    Query_8050   181  AGAACACGCTGTTTCTGCAACTGAACAGCCTGAGACCTGAGGACACGGCTGTCTATTACTGTGCGAAAGACCGCGTTCACACTGTCTGGT  270
V  93.2% (233/250)  IGHV3-30*18  227  ............A.......A..............G................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------------.....  19

                                      GT-------------------->                                 
                                      Y  G  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8050   271  ACGGCTACTACGCTATGGACGTCTGGGGCCAAGGCACCACGGTCACCGTCTCCTCA  326
D  100.0% (7/7)     IGHD6-13*01  20   ..------------------------------------------------------  21
J  96.2% (50/52)    IGHJ6*02     11   ----........G.....................G.....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_194575

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         399     3e-113
IGHD5-12*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCACAG	TAGTGGCCACG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCACAGTAGTGGCCACGACTACTTTGACTAC	ARLHSSGHDYFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  R  I  S  C  E  G  S  G  Y  T  F  A  T  Y
                    Query_8051     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGCAGTCTCTGAGGATCTCCTGTGAGGGTTCTGGATACACCTTCGCCACCTA  90
V  94.1% (272/289)  IGHV5-10-1*01  6    ........................................G....................A...............G...TA...G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  K  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_8051     91   TTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAAGATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  94.1% (272/289)  IGHV5-10-1*01  96   C..................................................G.G....................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  T  D  N  S  I  T  T  A  Y  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_8051     181  GTCCTTCCAAGGCCACGTCACCATCTCAACTGACAATTCCATCACCACTGCCTACCTGCAGTGGAACAGTCTGAAGGCCTCGGACACAGC  270
V  94.1% (272/289)  IGHV5-10-1*01  186  ............................G.......G.......G....................G...C.................C..  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          M  Y  Y  C  A  R  L  H  S  S  G  H  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8051     271  CATGTATTATTGCGCGAGACTTCACAGTAGTGGCCACGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  94.1% (272/289)  IGHV5-10-1*01  276  .........C..T......-------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                    
D  90.9% (10/11)    IGHD5-12*01    8    ---------------------------.......T...------------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02       1    --------------------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_194574

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATGATC	GTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATCGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDRGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_8052   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAGTTA  90
V  95.2% (277/291)  IGHV5-51*01  6    .................................................................G.....................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  I  M  Y  P  D  D  S  D  I  R  Y  S  P
                    Query_8052   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATCGGGATCATGTATCCTGATGACTCTGATATCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G.......................................G........C.......G...........C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  G  T  A  Y  L  Q  W  R  S  L  R  A  S  D  T  A
                    Query_8052   181  GTCTTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCGGCACCGCCTACCTGCAGTGGAGGAGCCTGAGGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  ...C...C...................................A......................C.......A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  F  C  A  R  H  G  D  D  R  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  P  G  T  T  V
                    Query_8052   271  CATATATTTCTGTGCGAGACATGGGGATGATCGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCCGGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  ...G....A............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  90.9% (10/11)    IGHD1-26*01  7    --------------------------------.......C...-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------.......A.......................AA...........  49

                                                   
                                        T  V  S  S 
                    Query_8052   361  CACCGTCTCCTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_194577

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            318     6e-89
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ4*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCACGGTGA	ATTCCTATGATAGTGATGGTTA	CGACTATTG	GGGGC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	22	2	0	91.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	231	217	14	0	93.9


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  R  H  W  M  S  W  V  G  Q  A  P  G  K  G  L  Q  W  V  A  N  I  
                    Query_8053   14   GTGCAGCCTCTGGATTCACCTTTAGTCGACATTGGATGAGCTGGGTCGGCCAGGCTCCAGGGAAGGGGCTGCAGTGGGTGGCCAATATAA  103
V  93.9% (217/231)  IGHV3-7*01   65   ..........................A.CT.................C.......................G.............C....  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  Q  D  G  S  Q  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  L  L  Y  L  
                    Query_8053   104  ACCAAGATGGAAGTCAGAAATATTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTTACTGTATCTGG  193
V  93.9% (217/231)  IGHV3-7*01   155  .G............G.......C.......................................................C..........C  244
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      ------------------------------------------->                                              
                                      E  M  H  S  L  R  D  E  D  T  A  V  Y  F  C  A  R  G  T  V  N  S  Y  D  S  D  G  Y  D  Y  
                    Query_8053   194  AAATGCACAGCCTGAGAGACGAGGACACGGCTGTGTATTTCTGTGCGAGAGGCACGGTGAATTCCTATGATAGTGATGGTTACGACTATT  283
V  93.9% (217/231)  IGHV3-7*01   245  .....A............C....................A...........---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  86.4% (19/22)    IGHD3-22*01  3    ------------------------------------------------------------...A..........AG......--------  24

                                                                        
                                      W  G  P  G  K  P  G  H  R  L  L   
                    Query_8053   284  GGGGGCCAGGGAAACCTGGTCACCGTCTCCTCAG  317
J  97.0% (32/33)    IGHJ4*02     16   -............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_194576

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_8054   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  92.2% (225/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  S  L  K  P  R  V  T  I  S  L  D  T  S  K  N 
                    Query_8054   91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCTCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  ...A....G......T.......T..............................AG............A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       H  F  S  R  R  L  G  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G 
                    Query_8054   181  CATTTCTCCCGGAGGCTGGGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGT  270
V  92.2% (225/244)  IGHV4-59*08  229  ..G.......T..A....A.C..........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_8054   271  TATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  334
J  94.2% (49/52)    IGHJ1*01     1    ------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_194579

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD5-18*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGCCATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGCCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	240	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_8055   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAAAGACTGGAG  90
V  98.8% (240/243)  IGHV4-59*01  49   .........................................T......................................GG........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8055   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (240/243)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D 
                    Query_8055   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGCCATGGTTACGGAGGAGTTGAC  270
V  98.8% (240/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD5-18*01  6    ---------------------------------------------------------------......T........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8055   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_194578

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           293     2e-81
IGHD6-19*01                                                                                           21.8    0.042
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGAGCCTCTACGCTAAT	AGTGGCTGGTA	TCGGGGTCCCAG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGAGCCTCTACGCTAATAGTGGCTGGTATCGGGGTCCCAGCTGGTTCGACCCC	AKSLYANSGWYRGPSWFDP	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	214	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  P  N  Y  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_8056   1    ACCCTGTCCCTCACCTGCAGTGTCTCCGGTGGCTCCATAAGTCCCAACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  88.8% (214/241)  IGHV4-59*08  49   ...................C......T...........C...AGTT.................................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  F  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  R  D 
                    Query_8056   91   TGGATTGGATTCATTCATTACAGTGGAGCCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACTATGTCAGTGGACACGTCCAGGGAC  180
V  88.8% (214/241)  IGHV4-59*08  139  ........G.AT..CT..........GAG......C.............................C..A.....A..........A.A..  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  S  L  Y  A  N  S  G  W  Y 
                    Query_8056   181  CAGTTCTCCCTGAGGCTGAGCTCGGTGACCGCCGCAGACACGGCCGTTTACTATTGTGCGAAGAGCCTCTACGCTAATAGTGGCTGGTAT  270
V  88.8% (214/241)  IGHV4-59*08  229  .............A.........T.......................G..T..C.......-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (11/11)   IGHD6-19*01  10   ------------------------------------------------------------------------------...........-  20

                                      ----------------------->                                  
                                       R  G  P  S  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8056   271  CGGGGTCCCAGCTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  328
J  95.7% (45/47)    IGHJ5*02     5    -----------........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_281158

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           329     3e-92
IGHD3-3*01                                                                                            29.5    2e-04
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTGATACAGTCTTT	CGATTTTTGGAGTGG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTGATACAGTCTTTCGATTTTTGGAGTGGCTACTTCGACTAC	AKDLIQSFDFWSGYFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8057   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTTACTATGGCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-30*18  47   .....................................C......AG.........G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  V  N  D  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  D  
                    Query_8057   91   AGTGGGTGGCAGTTATTTCATATGATGGAGTTAATGACCACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGACA  180
V  92.0% (230/250)  IGHV3-30*18  137  ................A............AG....A.AT...............................................TC..  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  K  V  F  L  Q  M  N  S  L  R  V  E  D  T  A  T  Y  Y  C  A  K  D  L  I  Q  S  F  D  
                    Query_8057   181  AGAACAAGGTGTTTCTGCAAATGAACAGCCTGAGAGTTGAGGACACAGCTACTTATTACTGTGCGAAAGATCTGATACAGTCTTTCGATT  270
V  92.0% (230/250)  IGHV3-30*18  227  ......C.C...A.......................C.........G...GTG.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD3-3*01   7    -------------------------------------------------------------------------------------.....  11

                                      GT-------------------->                                  
                                      F  W  S  G  Y  F  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8057   271  TTTGGAGTGGCTACTTCGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (15/15)   IGHD3-3*01   12   ..........-----------------------------------------------  21
J  95.7% (45/47)    IGHJ4*02     2    ----------......T.............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_281159

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           330     1e-92
IGHD6-13*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  A  L  E 
                    Query_8058   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGCACTGGAG  90
V  93.1% (228/245)  IGHV4-59*08  49   ...........................................G......................................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  F  Y  T  G  T  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8058   91   TGGATCGGGTCTATCTTTTACACTGGGACCACCAACTACGACCCCTCTCTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGAAC  180
V  93.1% (228/245)  IGHV4-59*08  139  .....T....A.....A.....G.....G..........A.......C....................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  V  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  H  R  A  A  A  G  P 
                    Query_8058   181  CAGTTCTCCCTGAGAGTGACCTCTCTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATCCCCATAGAGCAGCAGCTGGCCCC  270
V  93.1% (228/245)  IGHV4-59*08  229  .............AGC...G....G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD6-13*01  7    --------------------------------------------------------------------------............----  18
J  93.2% (41/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_8058   271  TTTGACAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  313
J  93.2% (41/44)    IGHJ4*02     6    ......T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_281154

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-10*01                                                                                           50.7    9e-11 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTT	GTATTACTATGGTTCGGGGAGTTATT	CG	GACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTGTATTACTATGGTTCGGGGAGTTATTCGGACTGC	ARSLYYYGSGSYSDC	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	112	2	0	98.2
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_8059   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  96.8% (240/248)  IGHV4-31*03  50   .....TCC...A..............................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_8059   94   TGGAGTGGATTGGGCACATCTACTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTAACCATATCAGTAGACACGTCTA  183
V  96.8% (240/248)  IGHV4-31*03  140  ..............T.......T............................................T......................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  Y  G  S  
                    Query_8059   184  AGAACCAGTTCTCCCTGAAGCTGAGATCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGATCCTTGTATTACTATGGTTCGG  273
V  96.8% (240/248)  IGHV4-31*03  230  .........................C..........................................----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (26/26)   IGHD3-10*01  1    -------------------------------------------------------------------------.................  17

                                      ---------------->                                  
                                      G  S  Y  S  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8059   274  GGAGTTATTCGGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (26/26)   IGHD3-10*01  18   .........------------------------------------------  26
J  97.5% (39/40)    IGHJ4*02     9    -----------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_281155

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           355     3e-100
IGHD3-16*02                                                                                           12.2    31    
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTATCG	ACATTGGTTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTATTTGACTAT	ARHYRHWLFDY	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	239	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  L  T  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_8060   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCCTCACCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.2% (239/251)  IGHV4-39*01  49   ...............................G....A...G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8060   91   CTGGAGTGGATTGGGAGTTTGTATTATAGTGGCAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  95.2% (239/251)  IGHV4-39*01  139  ..................A.C...........G...............................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  H  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  H  W  L  F 
                    Query_8060   181  AAGAACCACTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATTATCGACATTGGTTATTT  270
V  95.2% (239/251)  IGHV4-39*01  229  ........G..C........G....G...T.........................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-16*02  25   -----------------------------------------------------------------------......-------------  30
J  97.7% (42/43)    IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8060   271  GACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  97.7% (42/43)    IGHJ4*02     9    .....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_281156

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           296     2e-82
IGHD3-10*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAC	TGGAGGGGGCTTCGGGACAG	TATTATAAC	GGACGGCGGGGGAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACTGGAGGGGGCTTCGGGACAGTATTATAACGGACGGCGGGGGATTATGGACGTC	ATLEGASGQYYNGRRGIMDV	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	104	10	0	91.2
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	249	219	30	0	88


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  I  R  S  N  T  Y  Y  W  A  W  V  R  Q  S  P  G  K  G  
                    Query_8061   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTCCATCAGAAGCAACACTTACTACTGGGCCTGGGTCCGCCAGTCCCCAGGGAAGGGGC  93
V  88.0% (219/249)  IGHV4-39*01  50   .....TCC...A....C.............G.........C..T.GT.G...........G....A........C...............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  A  I  H  Y  R  G  N  T  Y  Y  K  S  S  L  K  S  R  V  T  M  S  V  D  T  S  
                    Query_8061   94   TGGAGTGGATTGGGGCTATCCATTATAGAGGGAACACCTACTACAAGTCGTCCCTCAAGAGTCGAGTCACCATGTCCGTGGACACGTCCA  183
V  88.0% (219/249)  IGHV4-39*01  140  ..............AG....T.......T....G............CC.........................A.....A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  N  L  G  S  V  T  V  A  D  T  S  V  Y  Y  C  A  T  L  E  G  A  S  G  Q  
                    Query_8061   184  AGAACCAGTTCTCCCTGAACCTGGGGTCTGTGACCGTCGCAGACACGTCTGTGTATTATTGTGCGACACTGGAGGGGGCTTCGGGACAGT  273
V  88.0% (219/249)  IGHV4-39*01  230  ...................G...A.C..........C..........G..........C.......G..---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD3-10*01  23   -----------------------------------------------------------------------------------------.  23

                                      R3-IMGT------------------------>                                 
                                      Y  Y  N  G  R  R  G  I  M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_8061   274  ATTATAACGGACGGCGGGGGATTATGGACGTCTGGGGCCAAGGGGCCACGGTCACCGTCTCCTCA  338
D  100.0% (9/9)     IGHD3-10*01  24   ........---------------------------------------------------------  31
J  97.7% (42/43)    IGHJ6*02     20   ----------------------......................A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_281150

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         361     4e-102
IGHD1-26*01                                                                                           10.3    124   
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ACCTCTTGGGCGAAAGGGATAG	GTGGG	TGGGT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACCTCTTGGGCGAAAGGGATAGGTGGGTGGGTCTGGTTCGCCCCC	ARTSWAKGIGGWVWFAP	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  V  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_8062     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  96.4% (240/249)  IGHV4-30-4*01  49   ..................A............G.................A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  C  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8062     91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  96.4% (240/249)  IGHV4-30-4*01  139  ................A........................C................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  K  M  T  S  V  I  A  A  D  T  A  A  Y  Y  C  A  R  T  S  W  A  K  G  I 
                    Query_8062     181  AAGAACCAGTTCTCCCTGAAGATGACCTCTGTGATTGCCGCAGACACGGCCGCGTATTACTGTGCCAGAACCTCTTGGGCGAAAGGGATA  270
V  96.4% (240/249)  IGHV4-30-4*01  229  .....................C...G........C.................T................---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                        MGT-------------------->                                  
                                         G  G  W  V  W  F  A  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_8062     271  GGTGGGTGGGTCTGGTTCGCCCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  328
D  100.0% (5/5)     IGHD1-26*01    7    -.....----------------------------------------------------  11
J  95.7% (45/47)    IGHJ5*02       5    -----------........A..........................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_281151

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8063   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_8063   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_8063   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_8063   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_281152

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           363     1e-102
IGHD6-19*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AATGGCAA	AGCAGTGGCTGGT	TATGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAATGGCAAAGCAGTGGCTGGTTATGGGCTACTACGGTATGGACGTC	AREMAKQWLVMGYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8064   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGTCTGG  90
V  96.4% (241/250)  IGHV3-48*03  47   .............................................G.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  G  D  N  T  I  Y  Y  A  E  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_8064   91   AGTGGATTTCATACATTAGTAGTGGTGATAATACCATATACTACGCAGAGTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (241/250)  IGHV3-48*03  137  .....G.................A...G..G..................C......A.................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  M  A  K  Q  W  L  
                    Query_8064   181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGAAATGGCAAAGCAGTGGCTGG  270
V  96.4% (241/250)  IGHV3-48*03  227  .....T................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD6-19*01  7    ------------------------------------------------------------------------------............  18

                                      IMGT--------------------->                                 
                                      V  M  G  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8064   271  TTATGGGCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (13/13)   IGHD6-19*01  19   .----------------------------------------------------------  19
J  100.0% (52/52)   IGHJ6*02     11   -------....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_281153

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            353     9e-100
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              110     2e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGG	GTATAGCAGCTCG	ATCGTTA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTATAGCAGCTCGATCGTTATACTACTACTACGGTATGGACGTC	ARGGIAARSLYYYYGMDV	237	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	24	0	0	100
FR3-IMGT	123	236	114	112	2	0	98.2
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	232	229	3	0	98.7


Alignments

                                     <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                      C  A  A  S  R  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 
                    Query_8065  12   TGTGCAGCCTCTAGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATA  101
V  98.7% (229/232)  IGHV3-7*01  64   ............G.............................................................................  153
                                      C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                     -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                      K  Q  D  G  S  E  K  Y  N  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_8065  102  AAGCAAGATGGAAGTGAGAAATACAATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTG  191
V  98.7% (229/232)  IGHV3-7*01  154  ........................T.................................................................  243
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                     --------------------------------------------><----------------------CDR3-IMGT-------------
                                      Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  G  I  A  A  R  S  L  Y  Y  Y  Y  G 
                    Query_8065  192  CAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGGGTATAGCAGCTCGATCGTTATACTACTACTACGGT  281
V  98.7% (229/232)  IGHV3-7*01  244  ...................C................................--------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (13/13)   IGHD6-6*01  3    -------------------------------------------------------.............----------------------  15
J  100.0% (57/57)   IGHJ6*02    6    ---------------------------------------------------------------------------...............  20

                                     -------->                                 
                                      M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8065  282  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  100.0% (57/57)   IGHJ6*02    21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_85959

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            336     1e-94
IGHD4-17*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AC	ACGGTGACTAC	CGATTC	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAACACGGTGACTACCGATTCTACTACTATTACTACGGACTGGACGTC	VREHGDYRFYYYYYGLDV	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	126	24	22	2	0	91.7
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	248	8	7	1	0	87.5
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  T  A  S  G  F  T  F  S  A  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_8066   2    CCCTGTCCCTCACCTGTACAGCCTCTGGATTCACCTTTAGTGCCTATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAAT  91
V  93.5% (231/247)  IGHV3-7*03   50   .....AGA...T.....G.......................AG...........G.................................G.  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  A  N  I  K  Q  D  G  N  E  K  H  Y  V  G  S  V  K  G  R  F  T  I  S  R  D  N  A  K  
                    Query_8066   92   GGGTGGCCAACATAAAACAAGATGGAAATGAGAAACACTATGTGGGCTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCAAGA  181
V  93.5% (231/247)  IGHV3-7*03   140  ................G..........G.......T.........A...............A............................  229
                                      W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><----------------------CDR3-IMG
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  E  H  G  D  Y  R  F  Y  
                    Query_8066   182  ACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGTGAGAGAACACGGTGACTACCGATTCTACT  271
V  93.5% (231/247)  IGHV3-7*03   230  .................................................G..........C......-----------------------  296
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD4-17*01  6    ---------------------------------------------------------------------...........----------  16
J  95.0% (57/60)    IGHJ6*02     3    --------------------------------------------------------------------------------------....  6

                                      T--------------------->                                 
                                      Y  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8066   272  ACTATTACTACGGACTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  327
J  95.0% (57/60)    IGHJ6*02     7    ....C........TA.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_85958

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           274     9e-76
IGHD3-16*02                                                                                           27.6    9e-04
IGHJ3*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	ARGLLIEDPNYVWGSFRRNHNCYTV	261	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	40	11	0	78.4
CDR2-IMGT	126	146	21	16	5	0	76.2
FR3-IMGT	147	260	114	91	23	0	79.8
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	221	46	0	82.8


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  
                    Query_8067   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCACTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGC  90
V  82.8% (221/267)  IGHV4-59*01  26   ................T..............C.........A....C.......G.......A...G..........AG....A.C....  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  R  R  L  E  W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  
                    Query_8067   91   AGCCTCCAGGGAGGAGACTGGAGTGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCC  180
V  82.8% (221/267)  IGHV4-59*01  116  ....C.......A.G...........A....G.ATA...AT.A..G..........A..............C...A......A......A  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      L  S  G  D  L  S  R  N  Q  L  S  L  N  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  
                    Query_8067   181  TGTCAGGAGACCTGTCTAGGAATCAGTTGTCTCTCAACCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTC  270
V  82.8% (221/267)  IGHV4-59*01  206  .A....T....AC...C.A...C.....C..C..G..G....G.TCT.....................GT.....A...........---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -----------------------CDR3-IMGT-------------------------------->                         
                                      L  L  I  E  D  P  N  Y  V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  Q  G  T  P  V  T  
                    Query_8067   271  TTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCAAGGGACACCGGTCACCG  360
D  94.1% (16/17)    IGHD3-16*02  14   -----------------------.............A...--------------------------------------------------  30
J  94.7% (36/38)    IGHJ3*01     13   -------------------------------------------------------------...................AT........  41

                                               
                                      V  S  S  
                    Query_8067   361  TCTCTTCAG  369
J  94.7% (36/38)    IGHJ3*01     42   .........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_29150

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*05                                                                                         294     6e-82
IGHD3-10*01                                                                                           12.2    32   
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*05	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	TGGTTC	TACGTGGCG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGTGGTTCTACGTGGCGACAACTGGTTCGACCTC	VRVVLRGDNWFDL	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  D  S  I  T  R  G  G  Y  S  W  S  W  I  R  Q  S  P  G  K  G 
                    Query_8068     1    ACCCTGTCCCTCACCTGCGCTGTGTCCGGTGACTCCATCACCAGGGGTGGTTACTCCTGGAGTTGGATCCGCCAGTCCCCAGGGAAGGGC  90
V  87.6% (219/250)  IGHV4-30-2*05  49   .......................C..T....G........G...T.................C........G...C.A............  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  A  N  I  Y  Y  S  G  K  T  N  F  N  P  S  L  K  S  R  L  T  I  S  L  D  A  S 
                    Query_8068     91   CTGGAGTGGATTGCGAACATCTATTATAGTGGGAAGACCAACTTCAATCCGTCCCTCAAGAGTCGACTTACCATATCACTAGACGCGTCC  180
V  87.6% (219/250)  IGHV4-30-2*05  139  .............G.T........C.........GC...T...A...C..................G...........G.....A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         E  N  Q  F  S  L  K  L  M  S  M  T  A  A  D  T  A  V  Y  Y  C  V  R  V  V  L  R  G  D  N 
                    Query_8068     181  GAGAACCAATTCTCTCTGAAACTTATGTCGATGACTGCCGCAGACACGGCCGTTTATTACTGTGTCAGAGTGGTTCTACGTGGCGACAAC  270
V  87.6% (219/250)  IGHV4-30-2*05  229  A.......G.....C.....G..G.GC..TG......................G..........C.....--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01    10   ----------------------------------------------------------------------......--------------  15
J  96.1% (49/51)    IGHJ5*02       1    -------------------------------------------------------------------------------------.....  5

                                        ----------->                                  
                                         W  F  D  L  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_8068     271  TGGTTCGACCTCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  316
J  96.1% (49/51)    IGHJ5*02       6    ..........C.................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_29153

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_8069   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_8069   91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_8069   181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_8069   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_85954

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            325     3e-91
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCTA	TATTACTATGAAAGGAGTGGTT	CAT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCTATATTACTATGAAAGGAGTGGTTCATACTTCTTTGACGAC	ARSLYYYERSGSYFFDD	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  D  S  I  S  N  S  R  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_8070   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCATCAGTAATTCTAGGTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  92.3% (227/246)  IGHV4-4*02   49   ...............................G.........C.G.AG..AC...................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  M  G  D  I  H  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  K  S  K 
                    Query_8070   91   GAGTGGATGGGAGACATCCATCATAGTGGGACCACCAACTACAATCCGTCCCTCAAGAGTCGAGTCACCCTCTCAGTAGACAAGTCCAAG  180
V  92.3% (227/246)  IGHV4-4*02   139  ........T..G..A...T............G............C........................A.A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       K  R  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  Y  E  R  S 
                    Query_8070   181  AAGCGGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAAGCCTATATTACTATGAAAGGAGT  270
V  92.3% (227/246)  IGHV4-4*02   229  ..C.A.................G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  90.9% (20/22)    IGHD3-22*01  2    ------------------------------------------------------------------------...........T..T...  19

                                      -------------------->                                  
                                       G  S  Y  F  F  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8070   271  GGTTCATACTTCTTTGACGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  90.9% (20/22)    IGHD3-22*01  20   ....---------------------------------------------------  23
J  95.8% (46/48)    IGHJ4*02     1    -------...A.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_29155

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD1-1*01                                                                                            10.3    113  
IGHJ1*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TG	ACGAC	CTAA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGACGACCTAAAC	AKDDDLN	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  N  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8071   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATAACTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   .........................................AGC.G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  G  V  T  T  Y  Y  A  D  S  V  K  G  W  F  T  I  S  R  D  N  S  
                    Query_8071   91   AGTGGGTCTCAACCATTAGTGGTAGTGGAGTTACCACATACTATGCAGACTCCGTAAAGGGCTGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-23*01  137  ...........G.T..............T.G..G.........C...........G......C...........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  D  D  L  N  W  G  
                    Query_8071   181  AGAGCACGCTGTACCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTTTATTACTGCGCGAAAGATGACGACCTAAACTGGGGCC  270
V  92.8% (232/250)  IGHV3-23*01  227  ...A.........T..........................G...........A........T........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD1-1*01   13   ------------------------------------------------------------------------.....-------------  17
J  100.0% (36/36)   IGHJ1*01     17   ---------------------------------------------------------------------------------.........  25

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_8071   271  AGGGCACCCTGGTCACCGTCTCCTCAG  297
J  100.0% (36/36)   IGHJ1*01     26   ...........................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_29154

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           369     2e-104
IGHD5-18*01                                                                                           29.5    2e-04 
IGHJ2*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-18*01	IGHJ2*01	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGGGGGGGT	TGGATACAGCTATGG	CCGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGGGGGGTTGGATACAGCTATGGCCGAGACTGGTATTTCGATCTC	ARDGGGLDTAMAETGISIS	243	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  S  Y  D  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8072   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTAGTTATGACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (243/250)  IGHV3-48*03  47   ...................................A................A.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  G  G  G  T  I  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_8072   91   AGTGGGTTTCATACATTAGTACTGGTGGAGGTACCATATACTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (243/250)  IGHV3-48*03  137  .....................G.A....TA...........................A................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  G  G  L  D  T  
                    Query_8072   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATGGGGGGGGGTTGGATACAG  270
V  97.2% (243/250)  IGHV3-48*03  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD5-18*01  2    ---------------------------------------------------------------------------------.........  10

                                      -IMGT---------------------->                                  
                                      A  M  A  E  T  G  I  S  I  S  G  A  V  A  P  W  S  L  S  P  Q 
                    Query_8072   271  CTATGGCCGAGACTGGTATTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  332
D  100.0% (15/15)   IGHD5-18*01  11   ......--------------------------------------------------------  16
J  98.0% (50/51)    IGHJ2*01     3    -----------.......C...........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_29157

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           344     6e-97
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              46.8    3e-09


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAAGGCCC	GGGTATAGCAGTGGC	G	GGGGC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  E  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_8073   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGATTATGAAATGTACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.7% (233/246)  IGHV3-48*03  47   ...............................A............AG..........A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  S  S  G  A  T  K  Y  Y  A  D  S  V  K  G  R  L  T  M  S  R  D  N  A  
                    Query_8073   91   AGTGGCTTTCATACATAAGTAGTAGTGGTGCTACCAAGTACTACGCAGACTCTGTCAAGGGCCGACTCACCATGTCCAGAGACAACGCCA  180
V  94.7% (233/246)  IGHV3-48*03  137  .....G..........T............AG.....TA.................G.........T.......C................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT---------------------------------------------------->                            
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  R  P  G  Y  S  S  G  
                    Query_8073   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGACAAGGCCCGGGTATAGCAGTGGCG  270
V  94.7% (233/246)  IGHV3-48*03  227  ..................................................................------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (15/15)   IGHD6-19*01  1    --------------------------------------------------------------------------...............-  15

                                                                       
                                      G  G  Q  G  T  L  I  I  V  S  S  
                    Query_8073   271  GGGGCCAGGGAACCCTAATCATCGTCTCCTCAG  303
J  90.9% (30/33)    IGHJ4*02     16   ................GG...C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_29156

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           375     3e-106
IGHD4-17*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGTATACCTGA	TGACTACGTTGAC	AC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGTATACCTGATGACTACGTTGACACCTTTGACCAG	AGIPDDYVDTFDQ	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	243	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8074   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (243/246)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8074   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCGCCAACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (243/246)  IGHV4-31*03  139  ....................................A..T..................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  I  P  D  D  Y  V  D 
                    Query_8074   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGGGTATACCTGATGACTACGTTGAC  270
V  98.8% (243/246)  IGHV4-31*03  229  .....................................................G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  92.3% (12/13)    IGHD4-17*01  1    -----------------------------------------------------------------------------........G....  13

                                      ----------->                                  
                                       T  F  D  Q  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8074   271  ACCTTTGACCAGTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  316
J  93.2% (41/44)    IGHJ4*02     5    --.......T.C.......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_219825

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           403     1e-114
IGHD3-16*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATGTCACC	TGGGGG	TATTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATGTCACCTGGGGGTATTCTGACTAC	ARYVTWGYSDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	273	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y 
                    Query_8075   2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTAT  91
V  94.8% (273/288)  IGHV1-18*01  7    ...................C.................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  T  Y  N  H  N  T  H  F  A  Q 
                    Query_8075   92   GCCATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACTTACAATCATAACACACACTTTGCACAG  181
V  94.8% (273/288)  IGHV1-18*01  97   .GT....G..................................................G.G........GG.......A...A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_8075   182  AAACTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGTACCGCCTACATGGAACTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (273/288)  IGHV1-18*01  187  ..G.........................................C..A...........G..............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  Y  V  T  W  G  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8075   272  GTGTATTACTGTGCGAGATATGTCACCTGGGGGTATTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  94.8% (273/288)  IGHV1-18*01  277  ..................-------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD3-16*01  17   ---------------------------......----------------------------------------------  22
J  100.0% (41/41)   IGHJ4*02     8    --------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_219824

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           262     4e-72
IGHD2-15*01                                                                                           10.3    119  
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	ACATAATCCT	GCTGC	CAGAGGGGC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGACATAATCCTGCTGCCAGAGGGGCCAACTGGTTCGACCTC	ARGHNPAARGANWFDL	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	48	24	19	2	3	79.2
FR2-IMGT	49	99	51	45	6	0	88.2
CDR2-IMGT	100	120	21	18	3	0	85.7
FR3-IMGT	121	234	114	95	19	0	83.3
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	245	208	34	3	84.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  D  F  Y  G  G  S  F     D  S  Y  W  N  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_8076   1    ACCCTGTCCCTCACCTGCGATTTTTATGGTGGGTCCTT---TGATTCCTACTGGAATTGGATCCGCCAGACTCCAGGGAAGGGGCTGGAG  87
V  84.9% (208/245)  IGHV4-34*01  49   ...................C.G.C..............CAG..G..A........GC............C.C..................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  N  R  A  G  S  T  N  F  N  P  S  L  E  S  R  L  T  I  S  V  D  T  S  T  K 
                    Query_8076   88   TGGATTGCAGAAATCAATCGTGCTGGAAGCACCAACTTCAATCCGTCCCTCGAGAGTCGACTCACCATTTCAGTGGACACGTCCACGAAG  177
V  84.9% (208/245)  IGHV4-34*01  139  .......GG..........A.AG..............A...C.........A........G.......A.....A..........A...C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       R  F  S  L  R  L  N  S  L  N  A  A  D  T  G  V  Y  Y  C  A  R  G  H  N  P  A  A  R  G  A 
                    Query_8076   178  CGATTCTCCCTGAGGCTAAATTCTCTTAACGCCGCAGACACGGGTGTGTATTACTGTGCGCGAGGACATAATCCTGCTGCCAGAGGGGCC  267
V  84.9% (208/245)  IGHV4-34*01  229  .AG..........A...G.GC...G.G.C......G.......C................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (5/5)     IGHD2-15*01  21   ---------------------------------------------------------------------------.....----------  25
J  96.0% (48/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  D  L  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_8076   268  AACTGGTTCGACCTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  316
J  96.0% (48/50)    IGHJ5*02     3    .............C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_219821

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           279     3e-77
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	216	28	6	86.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_8077   4    CCCTGAGACTCTCCTGTGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.4% (216/250)  IGHV4-34*01  50   .....TCC...A....C.....C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_8077   94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.4% (216/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_8077   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.4% (216/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_8077   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_219820

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           363     1e-102
IGHD3-16*01                                                                                           14.1    8.0   
IGHJ4*02                                                                                              60.3    2e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	CGAGG	GTTTGGG	CTTT	GGCCA	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	244	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  V  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8078   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTACGTCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.3% (244/256)  IGHV3-15*01  47   .......T.............................T......A...C.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  S  D  G  G  T  T  D  Y  T  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_8078   91   AGTGGGTTGGCCGTATTAAAAGCAAAAGTGATGGTGGGACAACAGACTACACTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGACG  180
V  95.3% (244/256)  IGHV3-15*01  137  ...........................C......................G.....................................T.  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT---------------------------------------------------->                      
                                      D  S  N  S  T  L  F  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  D  E  G  L  G  
                    Query_8078   181  ATTCAAACAGCACGCTGTTTCTGCAAATGAACAGCCTAAAAACCGAGGACACGGCCGTGTATTACTGTACCACAGACGAGGGTTTGGGCT  270
V  95.3% (244/256)  IGHV3-15*01  227  .......A.A........A..................G..............A.......................--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (7/7)     IGHD3-16*01  14   ---------------------------------------------------------------------------------.......--  20

                                                                       
                                      F  G  Q  G  T  L  V  T  V  S  S  
                    Query_8078   271  TTGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (31/31)   IGHJ4*02     18   --...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_21368

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           346     2e-97
IGHD2-2*01                                                                                            27.6    8e-04
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAACT	TATTGTACTAGTACCACCTG	TTCTAAT	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAACTTATTGTACTAGTACCACCTGTTCTAATTACGACGGTATGGACGTC	ARGTYCTSTTCSNYDGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  V  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8079   1    GGTCCCTGAGACTCTCCTGCGCAGCGTCTGGATTCACCTTCAGTACTTATGCCGTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  94.7% (234/247)  IGHV3-33*01  47   ...................T.........................GC....G.A...............................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  Y  Y  D  G  S  N  K  Y  Y  A  G  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8079   91   AGTGGGTGGCATTCATATACTATGATGGAAGTAATAAATACTATGCAGGCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.7% (234/247)  IGHV3-33*01  137  ...........G.T....GG............................A.........................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  T  Y  C  T  S  T  
                    Query_8079   181  AGAACACGCTGTATCTGCAAATGAGCAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGGGGAACTTATTGTACTAGTACCA  270
V  94.7% (234/247)  IGHV3-33*01  227  ........................A...........................G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.0% (18/20)    IGHD2-2*01   5    --------------------------------------------------------------------------.......G........  20

                                      -IMGT----------------------->                                 
                                      T  C  S  N  Y  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8079   271  CCTGTTCTAATTACGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  90.0% (18/20)    IGHD2-2*01   21   G...----------------------------------------------------------  24
J  98.0% (50/51)    IGHJ6*02     12   -----------...T...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_219822

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           422     2e-120
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAAGCCGGC	TACTGTGGTTCGGGG	GAGTT	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAAGCCGGCTACTGTGGTTCGGGGGAGTTGTATGGACGTC	AREKPATVVRGSCMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  F  T  F  T  T  Y 
                    Query_8080   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTTCACCTTTACCACCTAT  91
V  96.6% (280/290)  IGHV1-18*01  7    .........................................................................A...........G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  K  T  N  Y  G  Q 
                    Query_8080   92   GGCATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCCCTTACAATGGTAAAACAAACTATGGACAG  181
V  96.6% (280/290)  IGHV1-18*01  97   ..T....G..........................................A.........G.............C..........C....  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  V  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  T  S  L  R  S  D  D  T  A 
                    Query_8080   182  AAGGTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGACGAGCCTGAGATCTGACGACACGGCC  271
V  96.6% (280/290)  IGHV1-18*01  187  ...C............................................................G.........................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  E  K  P  A  T  V  V  R  G  S  C  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_8080   272  GTGTATTACTGTGCGAGAGAAAAGCCGGCTACTGTGGTTCGGGGGAGTTGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  361
V  96.6% (280/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  93.3% (14/15)    IGHD3-10*01  5    -----------------------------....A..........----------------------------------------------  19
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------.........................................  59

                                         
                                       S 
                    Query_8080   362  TCA  364
J  100.0% (44/44)   IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_21366

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTATTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  N  H  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8081   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTAATCACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (222/245)  IGHV4-59*01  49   .......................................AG..G.T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  S  H  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  T  A  D  K  S  K  N 
                    Query_8081   91   TGGATTGCCTATATCTCTCACAGTGGGGGCACCAATTACAACCGCTCCCTCAAGAGTCGAGTCACCATAACAGCGGACAAGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  .......GG.......A.T........A.......C.......C.........................T...TA....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_8081   181  CAGTTTTCCCTGAAGGTGAGATCTGTGACCGCCGCGGACACGGCCGTATATTATTGTGCCAGAGAGGCCTACTCTTATTACGGTATGGAC  270
V  90.6% (222/245)  IGHV4-59*01  229  .....C.........C....C...........T..............G.....C.....G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  91.4% (53/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC..C............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_8081   271  GTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  306
J  91.4% (53/58)    IGHJ6*02     27   ...........A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_93704

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD6-6*01                                                                                            16.1    2.2  
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-6*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCCGATTCG	GCTCGTCC	GGGGACCTGTATACCTAT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCCGATTCGGCTCGTCCGGGGACCTGTATACCTATTTCGACCCC	ARDLRFGSSGDLYTYFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  A  T  Y  F  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_8082   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTGTCCATCGCTACTTACTTCTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   ...............................GC......AG..G.....A...................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  S  I  Y  Y  T  G  I  T  K  Y  N  P  S  L  K  S  R  V  T  I  L  L  D  T  S  K  S 
                    Query_8082   91   TGGATTGCGTCTATCTATTACACTGGGATCACCAAGTATAACCCCTCCCTCAAGAGTCGAGTCACCATATTACTAGACACGTCCAAGAGC  180
V  92.2% (226/245)  IGHV4-59*01  139  .......G..A...........G.....G......C..C...............................C.G...............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  E  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  R  F  G  S  S  G  D 
                    Query_8082   181  CAGTTCTCCCTGGAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATCTCCGATTCGGCTCGTCCGGGGAC  270
V  92.2% (226/245)  IGHV4-59*01  229  ............A......G...........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-6*01   11   ----------------------------------------------------------------------------........------  18

                                      -------------------->                                  
                                       L  Y  T  Y  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_8082   271  CTGTATACCTATTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  325
J  97.7% (42/43)    IGHJ5*02     9    ------------.........................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_21365

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         262     4e-72
IGHD3-16*01                                                                                           12.2    30   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TGGCCG	TTGGGG	N/A	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGCCGTTGGGGTCGACCCC	VAVGVDP	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	14	10	0	58.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	205	38	0	84.4


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  V  A  S  G  F  T  F  T  K  Y  M  I  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_8083     1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACTTTTACCAAGTACATGATACAATGGGTCCGCCAGGCTCCCGGCAAGGGGCTGG  90
V  84.4% (205/243)  IGHV3-30-3*01  47   .....................C...............C..C.GT.GC..TGCT..G..C.................A.............  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  G  I  I  S  N  D  G  T  Q  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8083     91   AGTGGGTTGGAATTATCTCAAATGATGGAACCCAGACACACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCGCGAGACAATTCCA  180
V  84.4% (205/243)  IGHV3-30-3*01  137  .......G.C.G....A...T.........G.A.T.A.T.......A.............................CA............  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                        K  N  T  L  Y  V  Q  M  N  N  L  R  P  G  D  T  A  V  Y  Y  C  V  A  V  G  V  D  P  W  G  
                    Query_8083     181  AGAACACCCTATATGTGCAAATGAACAATTTGAGACCTGGGGACACGGCTGTCTACTATTGTGTGGCCGTTGGGGTCGACCCCTGGGGCC  270
V  84.4% (205/243)  IGHV3-30-3*01  227  .......G..G...C............GCC.....G...A............G..T..C....---------------------------  289
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (6/6)     IGHD3-16*01    16   ---------------------------------------------------------------------......---------------  21
J  100.0% (42/42)   IGHJ5*02       10   ---------------------------------------------------------------------------...............  24

                                                                   
                                        Q  G  T  L  V  T  V  S  S  
                    Query_8083     271  AGGGAACCCTGGTCACCGTCTCCTCAG  297
J  100.0% (42/42)   IGHJ5*02       25   ...........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_21362

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           319     2e-89
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	N/A	N/A	ACTTCCGGGTCTAC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTTCCGGGTCTACCTTTGATTAT	TSGSTFDY	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  V  S  G  F  T  I  S  I  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8084   1    GGTCCCTGAGACTCTCCTGTGAAGTCTCTGGATTCACAATCAGCATCTATACCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.1% (223/242)  IGHV3-21*01  47   .....................C..C............CT....T.G.....G......C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  T  S  R  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  S  S  R  D  N  A  
                    Query_8084   91   AGTGGGTCTCATCTATTAGTGGTACTAGTCGTTACATCTACTACGCAGACTCAGTGAAGGGCCGATTCACCAGCTCCAGAGACAACGCCA  180
V  92.1% (223/242)  IGHV3-21*01  137  .............C......A...G....A.......A..................................T.................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  S  G  S  T  F  D  Y  W  
                    Query_8084   181  AGAATTCATTGTTTCTGCAGATGAACAGCCTGCGAGCCGAGGACACGGCTGTGTATTACTGTACTTCCGGGTCTACCTTTGATTATTGGG  270
V  92.1% (223/242)  IGHV3-21*01  227  ....C...C...A......A............A.............................----------------------------  288
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------......C..C....  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_8084   271  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  300
J  95.5% (42/44)    IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_93700

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           327     8e-92
IGHD3-16*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	GTGGAGC	TTGGGGG	GCCTAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTGGAGCTTGGGGGGCCTACGACTAC	GGAWGAYDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  A  M  A  W  L  R  Q  A  P  G  K  G  L  
                    Query_8085   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCACCTATGCCATGGCCTGGCTCCGCCAGGCTCCAGGGAAGGGGCTAC  90
V  93.0% (226/243)  IGHV3-23*01  47   ..........................................G..G..........AG....G.........................GG  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  D  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8085   91   AATGGGTCTCATCTATTAGTGATAGTGGAGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.0% (226/243)  IGHV3-23*01  137  .G.........G.........G......T.............................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      N  N  T  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  G  G  A  W  G  A  Y  D  Y  
                    Query_8085   181  ACAACACACTGTCTCTGCAAATGAATAGCCTGAGAGCCGAAGACACGGCCGTATATTATTGTGGTGGAGCTTGGGGGGCCTACGACTACT  270
V  93.0% (226/243)  IGHV3-23*01  227  .G.....G....A............C..............G.................C....---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (7/7)     IGHD3-16*01  16   ----------------------------------------------------------------------.......-------------  22
J  100.0% (38/38)   IGHJ4*02     9    -----------------------------------------------------------------------------------.......  15

                                                                     
                                      W  G  Q  G  T  L  V  T  V  S  S
                    Query_8085   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTC  301
J  100.0% (38/38)   IGHJ4*02     16   ...............................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_93703

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ2*01                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTACTATAATCCTAGTGGTTTTTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACTATAATCCTAGTGGTTTTTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGFYGYWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  N  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8086   1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAATAATTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ...........................G............G..G...C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  D  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8086   91   TGGATTGGGGACATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  .........T.T..............................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  F  Y 
                    Query_8086   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATTACTATAATCCTAGTGGTTTTTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.0% (21/25)    IGHD3-22*01  4    -----------------------------------------------------------------.......G..AG........A....  28

                                      -------------------->                                  
                                       G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8086   271  GGGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  325
J  100.0% (52/52)   IGHJ2*01     2    ---....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_21361

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ3*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCAAG	CGTTTGGGGGAGTTAT	TTCGT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAAGCGTTTGGGGGAGTTATTTCGTTGCTTTTGATTTC	AASVWGSYFVAFDF	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	227	13	0	94.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_8087   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGACCCCAGGGAAGGGACTGGAG  90
V  94.6% (227/240)  IGHV4-59*01  49   .............................T.......................................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  H  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  I  N  T  S  K  K 
                    Query_8087   91   TGGATTGGGTATATCTATTACAGTGGACACACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAAACACGTCCAAGAAG  180
V  94.6% (227/240)  IGHV4-59*01  139  ..........................GAG....A......................................G..G.............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  T  S  V  T  T  A  D  T  A  I  Y  Y  C  A  A  S  V  W  G  S  Y  F  V  A 
                    Query_8087   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCACTGCGGACACGGCCATATATTACTGTGCGGCAAGCGTTTGGGGGAGTTATTTCGTTGCT  270
V  94.6% (227/240)  IGHV4-59*01  229  ...................G..........G..............G.G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (16/16)   IGHD3-16*01  13   -----------------------------------------------------------------................---------  28
J  91.5% (43/47)    IGHJ3*01     4    --------------------------------------------------------------------------------------....  7

                                      -------->                                  
                                       F  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_8087   271  TTTGATTTCTGGGGCCAAGGGACACTGGTCGCCGTCTCCTCAG  313
J  91.5% (43/47)    IGHJ3*01     8    ......G.................A.....A.......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_206398

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         378     3e-107
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GCCTTCGGG	ACTATGTTTCGGGGAATTA	CT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGCCTTCGGGACTATGTTTCGGGGAATTACTACAACTGGTTCGACCCC	ARGLRDYVSGNYYNWFDP	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_8088     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-30-4*01  49   ..................A..............................A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8088     91   CTGGAGTGGATTGGGTACATCTATTACAGTGGAAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  98.4% (246/250)  IGHV4-30-4*01  139  ................................G.........................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R  G  L  R  D  Y  V  S 
                    Query_8088     181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTGCTGTGCCAGAGGCCTTCGGGACTATGTTTCG  270
V  98.4% (246/250)  IGHV4-30-4*01  229  ..........................................................A...........--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.5% (17/19)    IGHD3-10*01    6    -------------------------------------------------------------------------------......G....  16

                                        -IMGT--------------------->                                  
                                         G  N  Y  Y  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8088     271  GGGAATTACTACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  89.5% (17/19)    IGHD3-10*01    17   ....G...-----------------------------------------------------  24
J  100.0% (51/51)   IGHJ5*02       1    ----------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_326169

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           333     1e-93
IGHD3-10*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              46.8    3e-09


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ATTATTATGGTTCGGGGAGT	CGAGCTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATTATTATGGTTCGGGGAGTCGAGCTATGACTAC	ARGLLWFGESSYDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  D  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8089   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTCGATATGATATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-48*03  47   ............................................A.T.....A.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  Y  I  R  D  G  G  N  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8089   91   AGTGGGTTGCATATATTAGGGATGGTGGAAACACCATATACTACGCAGACTCTGTAAAGGGCCGATTCACCATATCCAGAGATAACGCCA  180
V  92.8% (231/249)  IGHV3-48*03  137  ........T....C.....TAG.A....T.GT.......................G.................C........C.......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  I  Y  Y  C  A  R  G  L  L  W  F  G  E  
                    Query_8089   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTATATATTACTGTGCGAGAGGATTATTATGGTTCGGGGAGT  270
V  92.8% (231/249)  IGHV3-48*03  227  ........................................G.........G.T................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.0% (19/20)    IGHD3-10*01  3    ----------------------------------------------------------------------....C...............  22

                                      ------------->                                
                                      S  S  Y  D  Y  R  G  Q  G  I  L  G  S  V  P  S
                    Query_8089   271  CGAGCTATGACTACCGGGGCCAGGGAATCCTGGGCTCCGTCCCCTC  316
J  87.2% (34/39)    IGHJ4*02     8    -------.......T............C.....T.A.....T....  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_326167

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	276	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_8090   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  96.5% (276/286)  IGHV5-51*01  6    ..................................................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_8090   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  96.5% (276/286)  IGHV5-51*01  96   ......................A.......G.............G..........................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_8090   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAGCACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  96.5% (276/286)  IGHV5-51*01  186  ....................C...................A...........................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8090   271  CGTGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.5% (276/286)  IGHV5-51*01  276  .A..............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_326166

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            316     2e-88
IGHD2-15*01                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	GTGGTA	CTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACGTGGTACTCGGGGTTTTGACTAC	ARHLGTRGTRGFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	53	27	22	2	3	81.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	248	227	18	3	91.5


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  
                    Query_8091   1    GGTCCCTGAGACTCTCCTGTGCTGTCTCTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGC  87
V  91.5% (227/248)  IGHV4-4*02   47   ..A.....TCC...A....C.............G.....T........GTA.......................C...............  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  T  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  I  I  S  L  D  T  S  
                    Query_8091   88   TGGAGTGGATTGGGGAAACCTATCACAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCACTAGACACGTCCA  177
V  91.5% (227/248)  IGHV4-4*02   137  ..................T......T...........................................C.......G......A.....  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  R  G  T  
                    Query_8091   178  AGAATCAGTTCTCCCTGAATCTCAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACGTGGTACTC  267
V  91.5% (227/248)  IGHV4-4*02   227  ....C..............G..G.G...........................................----------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-15*01  15   ---------------------------------------------------------------------------------......---  20

                                      ------------->                                  
                                      R  G  F  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_8091   268  GGGGTTTTGACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  315
J  97.7% (42/43)    IGHJ4*02     6    -----.........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_326161

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           304     9e-85
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAGTACCAA	ATAGCAGT	CCAATACCCCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCCAGTACCAAATAGCAGTCCAATACCCCCCCTTTGACTTC	VRGQYQIAVQYPPFDF	237	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	17	7	0	70.8
FR2-IMGT	48	98	51	47	4	0	92.2
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	108	6	0	94.7
CDR3-IMGT (germline)	237	243	7	6	1	0	85.7
Total	N/A	N/A	232	213	19	0	91.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  S  L  T  D  Y  A  M  Y  W  V  R  Q  A  P  G  K  G  P  E  W  V  A  L  I 
                    Query_8092   12   TGTGCAGCCTCTGGATTCAGCTTGACTGACTATGCAATGTACTGGGTCCGCCAGGCTCCAGGCAAGGGGCCGGAGTGGGTGGCCCTTATA  101
V  91.8% (213/232)  IGHV3-30*03  64   ...................C...C.G.AG.....GC...C..............................T............AG.....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  Y  H  G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  K  S  T  L  Y  L 
                    Query_8092   102  TCATATCATGGAAGTAATAAATTCTATGCAGACTCCGTGAAGGGCCGATTTACCATCTCCAGAGACATTTCCAAGAGCACGCTATATCTG  191
V  91.8% (213/232)  IGHV3-30*03  154  ......G...............A...........................C................A........A......G......  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       Q  M  N  S  L  R  A  E  D  T  A  V  H  Y  C  V  R  G  Q  Y  Q  I  A  V  Q  Y  P  P  F  D 
                    Query_8092   192  CAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGCATTACTGTGTGAGAGGCCAGTACCAAATAGCAGTCCAATACCCCCCCTTTGAC  281
V  91.8% (213/232)  IGHV3-30*03  244  ....................................T.........C.....--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (8/8)     IGHD6-19*01  5    ---------------------------------------------------------------........-------------------  12
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8092   282  TTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (43/44)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_326160

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           330     9e-93
IGHD1-1*01                                                                                            14.1    7.9  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	246	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	250	5	3	2	0	60
Total	N/A	N/A	247	229	18	0	92.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G  
                    Query_8093   4    CCCTGAGACTCTCCTGTACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  92.7% (229/247)  IGHV4-39*01  50   .....TCC...A....C.....C.....................AG..............G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S  
                    Query_8093   94   TGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCCA  183
V  92.7% (229/247)  IGHV4-39*01  140  ....................T..........................C.........A..................C.............  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G  
                    Query_8093   184  AGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGCC  273
V  92.7% (229/247)  IGHV4-39*01  230  .................A.......C................................C...G.G..-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD1-1*01   9    -------------------------------------------------------------------.......----------------  15
J  100.0% (38/38)   IGHJ4*02     10   ------------------------------------------------------------------------------............  21

                                                                
                                      Q  G  T  L  V  T  V  S  S 
                    Query_8093   274  AGGGAACCCTGGTCACCGTCTCCTCA  299
J  100.0% (38/38)   IGHJ4*02     22   ..........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_326163

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           388     5e-110
IGHD6-6*01                                                                                            21.8    0.045 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCC	ATAGCAGCTCG	GATGGGGA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCATAGCAGCTCGGATGGGGAACTTTGACTCC	AAIAARMGNFDS	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	267	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  V  S  R  Y
                    Query_8094   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCCGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCGTCAGTAGGTA  90
V  93.4% (267/286)  IGHV1-69*01  6    ..................G.................T..........................................T....C..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        L  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  L  L  R  T  A  N  Y  A  Q
                    Query_8094   91   TCTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGATCATCCCTCTTTTAAGGACAGCAAACTACGCACA  180
V  93.4% (267/286)  IGHV1-69*01  96   .GC.................................G...........................A.C..TG.T.................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  H  E  S  T  S  T  V  Y  M  E  V  N  S  L  G  S  Q  D  T  A
                    Query_8094   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGCACGAATCCACGAGCACAGTCTACATGGAGGTGAACAGCCTGGGATCTCAGGACACGGC  270
V  93.4% (267/286)  IGHV1-69*01  186  ...............................G..................C..........C...G.......A.....G..........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  A  A  I  A  A  R  M  G  N  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8094   271  CGTGTATTACTGTGCGGCCATAGCAGCTCGGATGGGGAACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  351
V  93.4% (267/286)  IGHV1-69*01  276  ................-----------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                  
D  100.0% (11/11)   IGHD6-6*01   5    -------------------...........---------------------------------------------------  15
J  97.7% (42/43)    IGHJ4*02     4    --------------------------------------.........A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_326162

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           296     2e-82
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	N/A	N/A	TGGGTGCGGGATGGCAACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGATGGGTGCGGGATGGCAACCTGACTAC	VMGAGWQPDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	241	4	3	1	0	75
Total	N/A	N/A	241	215	26	0	89.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  S  G  Y  Y  L  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8095   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTGAGTGGTTATTATTTGAACTGGATCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  89.2% (215/241)  IGHV4-59*01  49   ....................................A.C...A....C..C.G..G.........G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  L  I  S  Y  T  G  S  T  N  Y  N  P  S  L  Q  S  R  V  I  I  S  V  D  T  S  K  N 
                    Query_8095   91   TGGCTTGGTTTAATCTCTTACACCGGGAGTACCAACTACAACCCCTCCCTCCAGAGTCGAGTCATCATATCGGTAGACACGTCCAAGAAC  180
V  89.2% (215/241)  IGHV4-59*01  139  ...A....G.AT....A.....GT.....C.....................A............C......A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  V  M  G  A  G  W  Q  P  D  Y  W 
                    Query_8095   181  CAGTTCTCCCTGAGGTTGAGCTCTGTGACCGCTGCGGACACGGCCCTATATTATTGTGTGATGGGTGCGGGATGGCAACCTGACTACTGG  270
V  89.2% (215/241)  IGHV4-59*01  229  .............A.C.............................G.G.....C....C..-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
J  95.1% (39/41)    IGHJ4*02     8    --------------------------------------------------------------------------------..........  17

                                                                     
                                       G  P  G  T  L  V  T  V  S  S  
                    Query_8095   271  GGCCCGGGAACGCTGGTCACCGTCTCCTCAG  301
J  95.1% (39/41)    IGHJ4*02     18   ....A......C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_46398

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           346     2e-97
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGTCGTCGAGGGCACACGACATT	TATAGCAGTGGCTGG	GGGAGGCCGGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGTCGTCGAGGGCACACGACATTTATAGCAGTGGCTGGGGGAGGCCGGCTGACTAC	ARASSRAHDIYSSGWGRPADY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  D  S  G  F  T  F  S  S  H  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8096   1    GGTCCCTGAGACTCTCCTGTGCAGACTCTGGATTCACCTTCAGTAGCCACGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-30*03  47   ........................C......................T.T........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  S  Y  E  G  S  T  K  Y  Y  V  D  S  V  K  G  R  F  T  A  S  R  D  N  S  
                    Query_8096   91   AGTGGGTGGCTTTTATATCATATGAAGGAAGTACTAAATACTATGTAGACTCCGTGAAGGGCCGGTTCACCGCCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-30*03  137  ..........AG.............T.......A...........C..................A......AT.................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  A  S  S  R  A  H  D  
                    Query_8096   181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGAGCTGATGACACGGCTGTCTATTACTGTGCGAGAGCGTCGTCGAGGGCACACGACA  270
V  94.4% (235/249)  IGHV3-30*03  227  .......G................................G...........G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      DR3-IMGT-------------------------->                                  
                                      I  Y  S  S  G  W  G  R  P  A  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_8096   271  TTTATAGCAGTGGCTGGGGGAGGCCGGCTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  339
D  100.0% (15/15)   IGHD6-19*01  4    --...............----------------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    ----------------------------..............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_15815

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           276     3e-76
IGHD7-27*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD7-27*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGACAGGGGG	ACTGGGGA	N/A	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAGGGGGACTGGGGATGGTACTTCGATCTC	ARRQGDWGWYFDL	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	60	33	26	4	3	78.8
FR2-IMGT	61	111	51	44	7	0	86.3
CDR2-IMGT	112	129	21	12	6	3	57.1
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	252	218	28	6	86.5


Alignments

                                      <--------FR1-IMGT---------><-----------CDR1-IMGT-----------><--------------------FR2-IMGT-
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  S  A  G  H  Y  W  S  W  I  R  Q  T  P  G  K 
                    Query_8097   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGCAGTGCTGGTCACTATTGGAGTTGGATCCGCCAGACCCCCGGAAAG  90
V  86.5% (218/252)  IGHV4-31*03  49   ...............................G............---..G....T....C.....C............CA...A..G...  135
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S     G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K 

                                      --------------------><-----CDR2-IMGT-----><-----------------------------------------------
                                       G  L  E  W  M  G  Y  I  F  Y  T  V     P  Y  Y  N  P  S  L  K  S  R  L  T  M  S  G  D  T 
                    Query_8097   91   GGCCTGGAGTGGATGGGTTACATCTTTTATACTGTGC---CATACTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCAGGAGACACC  177
V  86.5% (218/252)  IGHV4-31*03  136  ..............T..G.......A...C.G..G.AGCA.C..............C............G.T.....A....T......G  225
                                       G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T 

                                      -----FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT
                                       A  K  N  Q  F  S  L  R  L  T  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  R  Q  G  D  W  G 
                    Query_8097   178  GCTAAGAACCAGTTTTCCCTGAGGCTGACCTCTGTGACTTCCGCGGACACGGCCGTGTATTACTGTGCGAGACGACAGGGGGACTGGGGA  267
V  86.5% (218/252)  IGHV4-31*03  226  T.............C.......A.....G..........G................................------------------  297
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                   
D  100.0% (8/8)     IGHD7-27*01  4    ----------------------------------------------------------------------------------........  11

                                      -------------->                                  
                                       W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8097   268  TGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  316
J  100.0% (49/49)   IGHJ2*01     5    .................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_15814

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     6e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_8098   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_8098   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_8098   181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_8098   271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_15813

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD1-1*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AATTTGCGT	CTGGAGCGAC	GTTCTCAACCTTTTG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAATTTGCGTCTGGAGCGACGTTCTCAACCTTTTGACTTCTTTGACTCG	AKNLRLERRSQPFDFFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  L  A  V  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8099   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGGCTTGCCGTGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (234/248)  IGHV3-23*01  47   ..............................................CTA....A.............C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  T  I  S  G  S  G  D  S  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8099   91   AGTGGCTCTCAACTATTAGTGGTAGTGGTGACAGCACATACTACACTGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCC  180
V  94.4% (234/248)  IGHV3-23*01  137  .....G.....G..................GT............G.A..........................................A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      Q  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  N  L  R  L  E  R  R  
                    Query_8099   181  AGAATACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAAAATTTGCGTCTGGAGCGACGTT  270
V  94.4% (234/248)  IGHV3-23*01  227  ....C...............................................A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (9/10)     IGHD1-1*01   8    -----------------------------------------------------------------------------.....A....---  17

                                      IMGT--------------------->                                  
                                      S  Q  P  F  D  F  F  D  S  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_8099   271  CTCAACCTTTTGACTTCTTTGACTCGTGGGGCCAGGGATCTCTGGTCACCGTCTCCTCAG  330
J  89.6% (43/48)    IGHJ4*02     1    ------------...A........AC............A.C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_15812

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            391     6e-111
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_8100  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.1% (270/290)  IGHV1-8*02  6    ..................G..........................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  K  T  G  Y  A  Q
                    Query_8100  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAAAACAGGCTATGCACA  180
V  93.1% (270/290)  IGHV1-8*02  96   ........A.........................................................C........C..............  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_8100  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.1% (270/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8100  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.1% (270/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_46399

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     2e-109
IGHD1-26*01                                                                                           27.6    9e-04 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTC	ARHGDDSGSYLYYFYGMDV	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	69	5	0	93.2
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	100	14	0	87.7
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	271	24	0	91.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  T  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_8101   3    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGACAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCCGGATACAGCTTTACCA  92
V  91.9% (271/295)  IGHV5-51*01  2    ....G.....G......................A...................................G...T................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  V  G  I  M  Y  P  G  D  S  D  T  R  Y  
                    Query_8101   93   ATTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGGTGGGGATCATGTATCCTGGTGACTCTGATACCAGATATA  182
V  91.9% (271/295)  IGHV5-51*01  92   GC..........G.....................................A..........C..........................C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  R  G  R  G  A  S  D  
                    Query_8101   183  GCCCGTCTTTCGAGGGCCACGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTATTTGCAGTGGAGGGGCCGGGGGGCCTCGGACA  272
V  91.9% (271/295)  IGHV5-51*01  182  .......C...C.A.....G......................................CC..........CA...T.AA...........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  F  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  P  G  T  
                    Query_8101   273  CCGCCATATATTTCTGTGCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTCTGGGGCCCGGGGACCA  362
V  91.9% (271/295)  IGHV5-51*01  272  .......G....A............-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (14/14)   IGHD1-26*01  4    ---------------------------------..............-------------------------------------------  17
J  93.0% (53/57)    IGHJ6*02     6    --------------------------------------------------.......A......T................AA.......  45

                                                       
                                      T  V  T  V  S  S 
                    Query_8101   363  CGGTCACCGTCTCCTCA  379
J  93.0% (53/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_15819

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            341     5e-96
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCCACCCGAAAA	TATGACAGTAGTGATTATT	CCTCCCACCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCACCCGAAAATATGACAGTAGTGATTATTCCTCCCACCTCTTTGACTAC	STRKYDSSDYSSHLFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	108	6	0	94.7
Total	N/A	N/A	240	229	11	0	95.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  T  N  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_8102   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTACTAACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.4% (229/240)  IGHV4-4*02   49   ..............................................G...........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  R  G  G  S  P  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  K 
                    Query_8102   91   GAGTGGATTGGGGAAATCTATCGTGGTGGGAGCCCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCACTAGACAAGTCCAAA  180
V  95.4% (229/240)  IGHV4-4*02   139  ......................A.A........A.....................................A...G.............G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  S  T  R  K  Y  D  S  S  D  Y 
                    Query_8102   181  AACCAGTTCTCCCTGCGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTTCCACCCGAAAATATGACAGTAGTGATTAT  270
V  95.4% (229/240)  IGHV4-4*02   229  ...............AA.....G.....................................------------------------------  288
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  89.5% (17/19)    IGHD3-22*01  8    ------------------------------------------------------------------------.....T.......G....  25

                                      -------------------->                                  
                                       S  S  H  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8102   271  TCCTCCCACCTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  89.5% (17/19)    IGHD3-22*01  26   .------------------------------------------------------  26
J  100.0% (44/44)   IGHJ4*02     5    -----------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_158460

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD5-18*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              75.7    5e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGCCATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGCCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	114	0	0	100
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	235	7	0	97.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  R  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E  
                    Query_8103   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGGAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAAAGACTGGAGT  93
V  97.1% (235/242)  IGHV4-59*01  50   .....TCC...A............................T......................................GG.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_8103   94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  97.1% (235/242)  IGHV4-59*01  140  ..........................................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D  
                    Query_8103   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGCCATGGTTACGGAGGAGTTGACT  273
V  97.1% (235/242)  IGHV4-59*01  230  ..............................................................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  93.3% (14/15)    IGHD5-18*01  6    --------------------------------------------------------------......T........-------------  20
J  97.6% (41/42)    IGHJ4*02     7    ------------------------------------------------------------------------------------......  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8103   274  ACTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  309
J  97.6% (41/42)    IGHJ4*02     13   ...................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_158467

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           336     1e-94
IGHD5-12*01                                                                                           25.7    0.003
IGHJ6*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GG	GGATATAGTGCCTACG	GCTGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGGGATATAGTGCCTACGGCTGGTACTACGGTATGGACGTC	AKGGYSAYGWYYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  L  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8104   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGGCTTGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-23*01  47   ..............................................CTA.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  V  S  S  S  G  R  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8104   91   AGTGGGTCTCAGGTGTTAGTAGTAGCGGTCGTACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.2% (232/249)  IGHV3-23*01  137  ............C.A.....G....T...G...G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  A  L  I  V  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  G  G  Y  S  A  Y  G  
                    Query_8104   181  AGAACGCCTTGATTGTACAAATGAACAGCCTGAGAGCCGAGGACACGGCCTTATATTACTGTGCGAAAGGGGGATATAGTGCCTACGGCT  270
V  93.2% (232/249)  IGHV3-23*01  227  .....A.GC..TA.C.G.................................G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD5-12*01  3    -----------------------------------------------------------------------..........G.....---  18

                                      T------------------>                                 
                                      W  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8104   271  GGTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  100.0% (51/51)   IGHJ6*02     12   --...................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_158466

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           327     9e-92
IGHD3-10*01                                                                                           10.3    119  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TAGGACCGGATG	GGTTC	AGTTGAT	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAGGACCGGATGGGTTCAGTTGATCTACCTTGACTCC	ARHRTGWVQLIYLDS	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8105   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGTGGTTATTCCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*08  49   ...................C......................A....C.A........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  F  I  S  Y  S  G  N  T  N  S  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_8105   91   TGGATTGGGTTTATCTCATACAGTGGGAATACCAACTCCAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCGAAGAGT  180
V  92.7% (227/245)  IGHV4-59*08  139  ..........A.....AT..........GC.......A.............................................C....AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  I  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  H  R  T  G  W  V  Q  L  I 
                    Query_8105   181  CAATTCTCCCTGAAGTTGATTTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAGACATAGGACCGGATGGGTTCAGTTGATC  270
V  92.7% (227/245)  IGHV4-59*08  229  ..G............C...GC...............................A............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-10*01  11   -----------------------------------------------------------------------------.....--------  15
J  93.3% (42/45)    IGHJ4*02     2    -----------------------------------------------------------------------------------------.  2

                                      ----------->                                
                                       Y  L  D  S  W  G  Q  G  N  L  V  T  V  S  S
                    Query_8105   271  TACCTTGACTCCTGGGGCCAGGGAAACCTGGTCACCGTCTCCTC  314
J  93.3% (42/45)    IGHJ4*02     3    ...T......A..............C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_302218

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ2*01                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	TACTATAATCCTAGTGGTTATTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACTATAATCCTAGTGGTTATTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGYYGYWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	239	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_8106   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.6% (239/245)  IGHV4-59*01  49   ............................................................A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  I  S  K  N 
                    Query_8106   91   TGGATTGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGATATCTCCAAGAAC  180
V  97.6% (239/245)  IGHV4-59*01  139  ........G....................................................................C.CG.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  Y  Y 
                    Query_8106   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACTACTATAATCCTAGTGGTTATTAC  270
V  97.6% (239/245)  IGHV4-59*01  229  ...................G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (21/24)    IGHD3-22*01  5    ------------------------------------------------------------------......G..AG.............  28

                                      -------------------->                                  
                                       G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8106   271  GGGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  325
J  100.0% (52/52)   IGHJ2*01     2    ---....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_158465

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           372     2e-105
IGHD3-10*01                                                                                           16.1    2.4   
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGA	GGTTCGGG	ACCTTACGCACGCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGAGGTTCGGGACCTTACGCACGCCACTACTCCGGTATGGACGTC	ARGGGSGPYARHYSGMDV	261	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	50	1	0	98
CDR2-IMGT	126	146	21	21	0	0	100
FR3-IMGT	147	260	114	108	6	0	94.7
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	253	15	0	94.4


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  V  F  Y  G  G  S  L  S  G  Y  Y  W  S  W  I  R  
                    Query_8107   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCGTTTTTTATGGGGGGTCCCTCAGTGGTTATTACTGGAGCTGGATCCGCC  90
V  94.4% (253/268)  IGHV4-34*01  26   ........T.......T.........................C.G.C.....T......T..........C...................  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  T  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  I  Y  N  A  S  L  K  S  R  V  T  
                    Query_8107   91   AGACCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCATCTACAATGCGTCCCTTAAGAGTCGAGTCACCA  180
V  94.4% (253/268)  IGHV4-34*01  116  ..C......................................................A......CC.......C................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  R  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_8107   181  TATCAGTAGACACGTCCAAGAGGCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGG  270
V  94.4% (253/268)  IGHV4-34*01  206  .....................AC.................................................................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  

                                      -------------CDR3-IMGT--------------------->                                 
                                      G  G  S  G  P  Y  A  R  H  Y  S  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8107   271  GAGGTTCGGGACCTTACGCACGCCACTACTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  347
D  100.0% (8/8)     IGHD3-10*01  11   --........-------------------------------------------------------------------  18
J  98.1% (52/53)    IGHJ6*02     10   ------------------------......A..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_302211

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     8e-121
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGGACAC	TGTAGTAGTGCCATCTGCGATG	GACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTAC	ARHMGHCSSAICDGPDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	281	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  Q  K  P  G  E  A  L  K  I  S  C  K  G  S  G  Y  S  F  G  S  Y
                    Query_8108   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGCAAAAGCCGGGGGAGGCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCAGTTA  90
V  96.6% (281/291)  IGHV5-51*01  6    ............................A.......C......T......................................AC...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_8108   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.6% (281/291)  IGHV5-51*01  96   ........G.................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_8108   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  96.6% (281/291)  IGHV5-51*01  186  .............................C.........C.................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  M  G  H  C  S  S  A  I  C  D  G  P  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_8108   271  CATGTATTACTGTGCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  96.6% (281/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  86.4% (19/22)    IGHD2-2*01   8    -------------------------------.........A...G....T...-------------------------------------  29
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_8108   361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_302210

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-9*01                                                                                            14.1    8.4  
IGHJ2*01                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTACGC	TTTTGAC	GGCA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTACGCTTTTGACGGCAACTGGTACTTCGATCTC	AREYAFDGNWYFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8109   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGCCATGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ...............................................T...................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  T  T  G  G  S  T  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_8109   91   AGTGGGTTTCAGCTATTACTACTACTGGTGGTAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  .......C..........G.GG..G.............T................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  M  E  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  Y  A  F  D  G  N  
                    Query_8109   181  AGAACACGTTGTCTATGGAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAGAGAGTACGCTTTTGACGGCAACT  270
V  94.0% (235/250)  IGHV3-23*01  227  ........C...A.C..C......................G.........................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-9*01   12   ----------------------------------------------------------------------------.......-------  18
J  98.0% (50/51)    IGHJ2*01     3    ---------------------------------------------------------------------------------------...  5

                                      ------------->                                  
                                      W  Y  F  D  L  W  G  R  G  P  L  V  T  V  S  S  
                    Query_8109   271  GGTACTTCGATCTCTGGGGCCGTGGCCCCCTGGTCACTGTCTCCTCAG  318
J  98.0% (50/51)    IGHJ2*01     6    ..........................A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_302213

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           294     6e-82
IGHD6-19*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGTGGC	CAGTGGC	CGGCGGAATAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTGGCCAGTGGCCGGCGGAATATTACTTTGACTTC	ARDGGQWPAEYYFDF	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	98	16	0	86
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  G  S  I  S  G  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_8110   4    CCCTGAGACTCTCCTGCAGTGTTTCTGGTGGCTCCATCAGCGGTAGCAGTTACTACTGGGGCTGGATCCGCCAGCCCCCCGGGAAGGGCC  93
V  87.6% (219/250)  IGHV4-39*02  50   .....TCC...A......C...C..................A....T................................A........G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  V  Y  Y  S  G  T  T  H  D  N  P  S  L  K  S  R  V  T  L  S  V  D  T  S  
                    Query_8110   94   TAGAGTGGATTGGGAGTGTCTACTATAGTGGGACCACTCACGACAACCCGTCCCTCAAGAGTCGCGTCACCCTGTCCGTTGACACGTCCA  183
V  87.6% (219/250)  IGHV4-39*02  140  .G...............A....T..........G...CT..T......................A......A.A.....A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  G  L  Y  F  C  A  R  D  G  G  Q  W  P  A  
                    Query_8110   184  AGAACCAGTTCTCCCTGAGGCTGAACTCTGTCACCGCCGCAGACACGGGTCTATACTTTTGTGCGAGAGATGGTGGCCAGTGGCCGGCGG  273
V  87.6% (219/250)  IGHV4-39*02  230  .......C..........A.....G......G................C.G.G..T.AC...........--------------------  299
                                      K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-19*01  9    -----------------------------------------------------------------------------.......------  15

                                      ---------------->                              
                                      E  Y  Y  F  D  F  W  G  Q  G  K  L  V  V  V  S 
                    Query_8110   274  AATATTACTTTGACTTCTGGGGCCAGGGAAAGCTGGTCGTCGTCTCC  320
J  88.1% (37/42)    IGHJ4*02     3    -----..........A..............CC......AC.......  44


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_335139

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           344     6e-97
IGHD1-26*01                                                                                           25.7    0.003
IGHJ1*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD1-26*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	ATC	GTATAGTGGAAGCTAC	AGGTT	CTTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAATCGTATAGTGGAAGCTACAGGTTCTTCCAACAC	AKESYSGSYRFFQH	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  E  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8111   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTTTGAGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-30*18  47   ..............................................C.A..GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  V  I  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8111   91   AGTGGGTGGCAGTTGTCATATATGATGGAAGTAACAAGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGGGACAATTCCA  180
V  94.0% (235/250)  IGHV3-30*18  137  ..............A.ATC...............T..A.........................................A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  I  Y  Y  C  A  K  E  S  Y  S  G  S  Y  
                    Query_8111   181  AGAACACGCTGTATCTGCAGATGAACAGCCTGAGAGTTGAGGACACGGCTATATATTACTGTGCGAAAGAATCGTATAGTGGAAGCTACA  270
V  94.0% (235/250)  IGHV3-30*18  227  ...................A................C.............G.G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD1-26*01  2    -------------------------------------------------------------------------.........G......-  17

                                      ------------->                                
                                      R  F  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8111   271  GGTTCTTCCAACACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTC  316
J  97.6% (41/42)    IGHJ1*01     9    ----......G...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_302215

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            350     8e-99
IGHD3-10*01                                                                                           10.3    125  
IGHJ3*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GAAT	TTATA	N/A	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGAATTTATAATGGTTTTGATGTC	ARGIYNGFDV	269	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	40	5	0	88.9
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	154	27	21	6	0	77.8
FR3-IMGT	155	268	114	105	9	0	92.1
CDR3-IMGT (germline)	269	275	7	7	0	0	100
Total	N/A	N/A	274	249	25	0	90.9


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  S  Q  T  L  L  I  T  C  D  I  T  R  D  S  V  S  S  N  T  V  A  W  N  W  I  R 
                    Query_8112   2    CTGGTGAAACCCTCGCAGACCCTCTTAATCACCTGTGACATCACCAGGGACAGTGTCTCTAGTAACACTGTTGCTTGGAATTGGATCAGG  91
V  90.9% (249/274)  IGHV6-1*01   31   ........G................C.C.........C....T..G................C....G..C.........C.........  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  R  S  D  Y  A  P  S  V  K  S  R 
                    Query_8112   92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATATTACAGATCCAAGTGGCGTTCTGACTATGCACCATCTGTGAAAAGTCGG  181
V  90.9% (249/274)  IGHV6-1*01   121  .........................................C.....G.........TA.AA...T......GT...............A  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  V  N  P  D  T  S  K  N  Q  F  S  L  H  L  N  S  V  T  P  E  D  T  A  I  Y  Y  C  A 
                    Query_8112   182  ATAACCGTCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTATTTATTATTGTGCA  271
V  90.9% (249/274)  IGHV6-1*01   211  ......A.....................................G..............................G.G.....C......  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------CDR3-IMGT--------->                                  
                                       R  G  I  Y  N  G  F  D  V  W  G  P  G  T  S  V  T  V  S  S  
                    Query_8112   272  AGAGGAATTTATAATGGTTTTGATGTCTGGGGCCCAGGGACATCGGTCACCGTCTCTTCAG  332
V  90.9% (249/274)  IGHV6-1*01   301  ....---------------------------------------------------------  304
                                       R                                                           
D  100.0% (5/5)     IGHD3-10*01  25   --------.....------------------------------------------------  29
J  91.7% (44/48)    IGHJ3*01     3    -------------...C.................A.......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_302217

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           349     2e-98
IGHD4-17*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GCCA	TGACTACGGTGAC	AACGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGCCATGACTACGGTGACAACGCCTTTGCTTAC	AKGHDYGDNAFAY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8113   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-23*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  N  I  G  G  T  G  G  N  R  V  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_8113   91   AGTGGGTCTCAAATATTGGAGGTACTGGTGGTAACAGAGTCTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  94.8% (236/249)  IGHV3-23*01  137  ...........GC....A.T....G........G..C.TA...............................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  H  D  Y  G  D  N  
                    Query_8113   181  AGAACACGCTCTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAAGGCCATGACTACGGTGACAACG  270
V  94.8% (236/249)  IGHV3-23*01  227  ..........G.........................................A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (13/13)   IGHD4-17*01  1    -------------------------------------------------------------------------.............----  13

                                      ---------->                                  
                                      A  F  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8113   271  CCTTTGCTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  95.5% (42/44)    IGHJ4*02     5    -.....AC.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_139660

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            319     2e-89
IGHD1-7*01                                                                                            16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGCGA	CCGA	GGAACTAC	CAGGATGTTCGAGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGACCGAGGAACTACCAGGATGTTCGAGAATGCTCTTGATATC	AGDRGTTRMFENALDI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	248	8	6	2	0	75
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  G  V  S  G  G  A  I  S  S  S  H  W  W  N  W  V  R  Q  A  P  G  K  G  L 
                    Query_8114  1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGCGGCGCCATCAGCAGCAGTCACTGGTGGAATTGGGTCCGCCAGGCCCCCGGGAAGGGGCTG  90
V  91.1% (226/248)  IGHV4-4*02  49   ...................C.........T...T..........T...A.........G.............C....A............  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  Q  I  Y  H  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S  K 
                    Query_8114  91   GAGTGGATTGGGCAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAGGAGTCGAGTCAGCATCTCAATAGACACGTCCAAG  180
V  91.1% (226/248)  IGHV4-4*02  139  ............G..........................................A...........C...A...G......A.......  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                      H  Q  F  A  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  D  R  G  T  T  R  M  F 
                    Query_8114  181  CACCAGTTCGCCCTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGCGGGCGACCGAGGAACTACCAGGATGTTC  270
V  91.1% (226/248)  IGHV4-4*02  229  A........T........C...G...........................G.....C......A.A..----------------------  296
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD1-7*01  10   ------------------------------------------------------------------------........----------  17

                                     ----------------->                                  
                                      E  N  A  L  D  I  W  G  Q  G  T  T  V  I  V  S  S  
                    Query_8114  271  GAGAATGCTCTTGATATCTGGGGCCAAGGGACAACGGTCATCGTCTCTTCAG  322
J  93.8% (45/48)    IGHJ3*02    3    ----.....T........................T.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_139661

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     2e-95
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCATCA	TATAGCAGTGGCTGG	GT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATCATATAGCAGTGGCTGGGTACTACTTTGACTAC	ARHHIAVAGYYFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  S  Y  S  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8115   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATTCCTATAGTATAAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-21*01  47   ..........................................G.AG......C..G.AC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  S  S  S  S  L  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8115   91   AGTGGGTCTCATTTATCAGTAGTAGTAGTCTTTATATATATTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.9% (232/247)  IGHV3-21*01  137  ............CC..T............AG...C.....C.................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  H  H  I  A  V  A  G  
                    Query_8115   181  AGAACTCACTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGCATCATATAGCAGTGGCTGGGT  270
V  93.9% (232/247)  IGHV3-21*01  227  ............A......................................................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (15/15)   IGHD6-19*01  4    -------------------------------------------------------------------------...............--  18

                                      ------------->                                  
                                      Y  Y  F  D  Y  *  G  Q  G  T  Q  V  T  V  S  S  
                    Query_8115   271  ACTACTTTGACTACTGAGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  318
J  95.8% (46/48)    IGHJ4*02     1    ................G.............T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_139662

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           316     2e-88
IGHD2-2*01                                                                                            14.1    8.8  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGCTCGTTGTGATAA	TACCATCTGC	CCGAAAAACTTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTCGTTGTGATAATACCATCTGCCCGAAAAACTTGCTGGTTCGACCCC	ARGLVVIIPSARKTCWFDP	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  D  I  S  I  N  T  G  D  Y  Y  W  S  W  F  R  Q  S  P  Q  K  G 
                    Query_8116   1    ACCCTGTCCCTCACCTGCACTGTCTCTGATATCTCCATCAACACCGGTGATTACTATTGGAGCTGGTTCCGCCAGTCCCCACAGAAGGGC  90
V  90.7% (225/248)  IGHV4-31*03  49   ............................G.GG........G..GT....G......C.........A........CA....GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  F  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S 
                    Query_8116   91   CTGGAATGGATTGGGTACATCTATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAGGAGTCGAGTTAGCATTTCCATAGACACGTCT  180
V  90.7% (225/248)  IGHV4-31*03  139  .....G..................................A.................A...........C...A..AG...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  V  V  I  I  P 
                    Query_8116   181  AAGAACCAGTTCTCCCTGAAGGTGAACTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGGGGGCTCGTTGTGATAATACCA  270
V  90.7% (225/248)  IGHV4-31*03  229  .....................C...G...........................G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.0% (9/10)     IGHD2-2*01   16   -------------------------------------------------------------------------------------.....  20

                                      3-IMGT----------------------->                                  
                                       S  A  R  K  T  C  W  F  D  P  W  G  P  G  T  L  V  S  V  S  S  
                    Query_8116   271  TCTGCCCGAAAAACTTGCTGGTTCGACCCCTGGGGCCCGGGAACCCTGGTCAGCGTCTCCTCAG  334
D  90.0% (9/10)     IGHD2-2*01   21   G....-----------------------------------------------------------  25
J  95.7% (45/47)    IGHJ5*02     5    -----------------....................A..............C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_195221

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           333     1e-93
IGHD3-9*01                                                                                            39.1    3e-07
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGACCTAC	TACGTTATTTTGACTGGTTATTA	ACAGGTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGACCTACTACGTTATTTTGACTGGTTATTAACAGGTTATGACTTC	ARGDLLRYFDWLLTGYDF	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  T  F  T  G  Y  F  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8117   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGACCTTTACTGGTTATTTCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAG  90
V  93.5% (229/245)  IGHV4-34*01  49   .................................T....C.G......C.A.....G...........................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  T  N  Y  S  P  S  L  K  S  R  V  T  L  S  V  D  T  S  K  N 
                    Query_8117   91   TGGATTGGGGAAATCAGTCATAGTGGATCCACCAACTACAGCCCGTCCCTCAAGAGTCGAGTCACCCTGTCAGTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-34*01  139  ................A..........AG...........A.........................A.A.....................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  I  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  L  L  R  Y  F  D  W 
                    Query_8117   181  CAAATCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCGACCTACTACGTTATTTTGACTGG  270
V  93.5% (229/245)  IGHV4-34*01  229  ..GT...............G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  95.7% (22/23)    IGHD3-9*01   5    -------------------------------------------------------------------------....A............  21

                                      -------------------->                                  
                                       L  L  T  G  Y  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_8117   271  TTATTAACAGGTTATGACTTCTGGGGCCAGGGAACTCTGGTCGCCGTCTCCTCAG  325
D  95.7% (22/23)    IGHD3-9*01   22   ......-------------------------------------------------  27
J  92.7% (38/41)    IGHJ4*02     8    --------------.....A...............C......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_195226

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           367     6e-104
IGHD1-26*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GA	GGTGTAGTGGGAGC	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTAT	ARGGVVGAPFDY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	70	5	0	93.3
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	18	6	0	75
FR3-IMGT	175	288	114	101	13	0	88.6
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	265	30	0	89.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  Q  P  G  S  S  V  K  V  S  C  K  S  S  G  G  S  F  S 
                    Query_8118   1    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGCAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGAGTTCTGGAGGTAGTTTCAGC  90
V  89.8% (265/295)  IGHV1-69*01  1    .....G.................G............A................................GC.........C.CC......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  A  V  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  M  P  L  F  G  I  P  T  Y 
                    Query_8118   91   AGCTATGCTGTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGTATCATGCCTCTGTTTGGCATACCAACGTAC  180
V  89.8% (265/295)  IGHV1-69*01  91   .........A...............................................G.G.....C...A.C.....T.C.G...AC...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  G  K  L  Q  G  R  V  T  I  T  A  D  A  S  T  R  T  A  Y  M  E  L  S  S  L  R  S  G  D 
                    Query_8118   181  GCAGGGAAGTTGCAGGGCAGAGTCACAATAACCGCGGACGCATCCACGAGGACAGCCTACATGGAGTTGAGCAGCCTGAGATCTGGGGAC  270
V  89.8% (265/295)  IGHV1-69*01  181  ...CA......C..............G..T..........A.........C...............C..................A....  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  I  Y  Y  C  A  R  G  G  V  V  G  A  P  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_8118   271  ACGGCCATTTATTACTGTGCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTATTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  358
V  89.8% (265/295)  IGHV1-69*01  271  ......G.G................---------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                 
D  92.9% (13/14)    IGHD1-26*01  1    ---------------------------...A..........-----------------------------------------------  14
J  95.5% (42/44)    IGHJ4*02     5    --------------------------------------------.........C............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_139665

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD1-20*01                                                                                           12.2    32   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCACCCTTCTGAAATGGC	TATAAC	CCCGATC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCACCCTTCTGAAATGGCTATAACCCCGATCGACTAC	AAHPSEMAITPIDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8119   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTTAGTAGTTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.1% (233/245)  IGHV3-23*01  47   .....................................C.....C..C...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  D  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  
                    Query_8119   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGATAACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCCA  180
V  95.1% (233/245)  IGHV3-23*01  137  ..............................G..G............................................G...........  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  A  H  P  S  E  M  A  I  
                    Query_8119   181  AGAATACCCTGTTTCTGCAAATGAACAGCCTGAGGGCCGAGGACACGGCCGTCTATTACTGTGCGGCCCACCCTTCTGAAATGGCTATAA  270
V  95.1% (233/245)  IGHV3-23*01  227  ....C..G....A.....................A.................A............-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD1-20*01  3    -------------------------------------------------------------------------------------.....  7

                                      ------------->                                  
                                      T  P  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8119   271  CCCCGATCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (6/6)     IGHD1-20*01  8    .-----------------------------------------------  8
J  100.0% (40/40)   IGHJ4*02     9    --------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_139666

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           315     5e-88
IGHJ6*02                                                                                              108     8e-28


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	N/A	N/A	TAAACTTCCGCCCGGATCCTCCCTCCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAACTTCCGCCCGGATCCTCCCTCCCACTACTACTACGGTATGGACGTC	VNFRPDPPSHYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  G  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_8120   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCCATGGCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.4% (222/243)  IGHV3-23*01  47   ...........................................C...T...C.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  R  V  S  S  I  S  A  T  G  G  R  K  F  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_8120   91   AGCGGGTCTCGAGTATAAGCGCCACTGGTGGCAGAAAGTTCTACGCAGACTCCGTGAAGGGCCGGCTCACCATCTCCAGAGACAATTCCA  180
V  91.4% (222/243)  IGHV3-23*01  137  ..T.......AGC...T..T.GT.G......T..C.CA.A.........................T........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  H  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  N  F  R  P  D  P  P  S  
                    Query_8120   181  AGAACACGCTGCATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGTAAACTTCCGCCCGGATCCTCCCTCCC  270
V  91.4% (222/243)  IGHV3-23*01  227  ...........T............................G......................---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             

                                      GT-------------------->                                 
                                      H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8120   271  ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (56/56)   IGHJ6*02     7    ........................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_195225

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           335     4e-94
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  E  G 
                    Query_8121   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGGAGGGG  90
V  93.9% (229/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G..................................A.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8121   91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCC  180
V  93.9% (229/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C.................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_8121   181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  93.9% (229/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8121   271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_139668

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           322     2e-90
IGHD4-17*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACGTAGGG	ACGGTGACTAC	GGGGCGGGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACGTAGGGACGGTGACTACGGGGCGGGGTTTGAGTAC	ARERRDGDYGAGFEY	237	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	106	8	0	93
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	232	219	13	0	94.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  L  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_8122   13   GTGCAGCGTCTGGATTCACCTTAAGTAGATATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAATGGGTGGCAGTTATCT  102
V  94.4% (219/232)  IGHV3-33*01  65   ......................C.....C............................................G..............A.  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      W  Y  D  G  N  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  E  S  K  N  M  L  H  L  
                    Query_8122   103  GGTATGATGGAAATAATAAATACTATGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACGAGTCCAAGAACATGCTGCATCTGC  192
V  94.4% (219/232)  IGHV3-33*01  155  ............G.................................A..................A.T..........C....T......  244
                                      W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      Q  M  N  S  L  G  A  D  D  T  A  V  Y  Y  C  A  R  E  R  R  D  G  D  Y  G  A  G  F  E  Y  
                    Query_8122   193  AAATGAACAGCCTGGGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAACGTAGGGACGGTGACTACGGGGCGGGGTTTGAGTACT  282
V  94.4% (219/232)  IGHV3-33*01  245  ..............A.......G...........G.................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (11/11)   IGHD4-17*01  6    ------------------------------------------------------------...........-------------------  16
J  97.7% (42/43)    IGHJ4*02     6    --------------------------------------------------------------------------------.....C....  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8122   283  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (42/43)    IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_319751

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           399     3e-113
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGCCGCCCTAGAATAT	TATGATAGTAATGATTATTAC	CCCCCCCGCTGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGCCGCCCTAGAATATTATGATAGTAATGATTATTACCCCCCCCGCTGGGACTAC	AREAALEYYDSNDYYPPRWDY	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  G  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  R  Y
                    Query_8123   1    GCAGCTGGTGCAGTCTGGAGCTGGGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCCGGAGGCACCTTCAGCAGATA  90
V  93.8% (273/291)  IGHV1-69*01  6    ..................G....A.............................................T.................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  N  W  L  R  Q  A  P  G  Q  G  P  E  W  M  G  G  I  I  P  I  F  A  T  A  H  Y  A  Q
                    Query_8123   91   TGTTATCAACTGGCTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGAGGGATCATCCCTATCTTTGCTACAGCACACTACGCACA  180
V  93.8% (273/291)  IGHV1-69*01  96   ..C.....G....G........................T................................G.......A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  T  A  D  E  S  T  N  T  A  Y  M  E  L  S  G  L  R  F  E  D  T  A
                    Query_8123   181  GAAGTTCCAGGACAGAGTCACGATTACCGCGGACGAATCCACGAACACAGCCTACATGGAACTGAGCGGCCTAAGATTTGAGGACACGGC  270
V  93.8% (273/291)  IGHV1-69*01  186  ...........G................................G...............G......A....G....C............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        I  Y  Y  C  A  R  E  A  A  L  E  Y  Y  D  S  N  D  Y  Y  P  P  R  W  D  Y  W  G  Q  G  T
                    Query_8123   271  CATATATTACTGTGCGAGAGAGGCCGCCCTAGAATATTATGATAGTAATGATTATTACCCCCCCCGCTGGGACTACTGGGGCCAGGGAAC  360
V  93.8% (273/291)  IGHV1-69*01  276  .G.G.................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  90.5% (19/21)    IGHD3-22*01  8    -------------------------------------..........G..G.......--------------------------------  28
J  100.0% (40/40)   IGHJ4*02     9    ----------------------------------------------------------------------....................  28

                                                          
                                        L  V  T  V  S  S  
                    Query_8123   361  CCTGGTCACCGTCTCCTCAG  380
J  100.0% (40/40)   IGHJ4*02     29   ....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_195228

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           372     2e-105
IGHD1-26*01                                                                                           10.3    130   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	GCTCCAGGGT	TGGGA	TT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCCAGGGTTGGGATTCTTTGACTAT	AAPGLGFFDY	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	262	24	0	91.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  A  S  G  N  T  L  T  N  N
                    Query_8124   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCGTCAGTGAAAGTTGCCTGCAAGGCATCCGGAAACACCCTCACCAACAA  90
V  91.6% (262/286)  IGHV1-46*01  6    ..................G.......................C........G...T.............T...T.....T......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  N  K  T  T  Y  A  Q
                    Query_8124   91   CTTCATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTAATAAGACAACCTATGCACA  180
V  91.6% (262/286)  IGHV1-46*01  96   ..AT..................................................................GG..GC....G...C.....  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  L  T  M  T  R  V  T  S  T  R  T  V  Y  M  E  L  S  N  L  R  S  E  D  T  A
                    Query_8124   181  GAAGTTCCAGGGCAGACTGACCATGACTAGGGTCACGTCCACGAGAACAGTCTACATGGAGCTGAGCAACCTGAGATCTGAGGACACGGC  270
V  91.6% (262/286)  IGHV1-46*01  186  ................G.C........C....A............C......................G.....................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        V  Y  Y  C  A  A  P  G  L  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_8124   271  CGTGTATTACTGCGCGGCTCCAGGGTTGGGATTCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  347
V  91.6% (262/286)  IGHV1-46*01  276  ............T...-------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                              
D  100.0% (5/5)     IGHD1-26*01  8    --------------------------.....----------------------------------------------  12
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------.........C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_319753

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           308     4e-86
IGHD3-3*01                                                                                            12.2    31   
IGHJ3*01                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCT	TTACGA	GGGGCTAACTTTTCCTT	TCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCTTTACGAGGGGCTAACTTTTCCTTTC	ARDLYEGLTFPF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	221	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8125   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTTCTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  90.2% (221/245)  IGHV4-59*01  49   ..........................................AG.....A........................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  N  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  N  S 
                    Query_8125   91   TGGCTAGGATATATCAATTACACTGGGAGTACCAACTACAATCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAACAGC  180
V  90.2% (221/245)  IGHV4-59*01  139  ...A.T..G......T......G......C...........C..................G.........................G.A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  G  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  Y  E  G  L  T  F  P 
                    Query_8125   181  CAATTCTCCCTGGGTTTGTCTTCTGTGACCGCTGCGGACACGGCCGTGTACTATTGTGCGAGAGACCTTTACGAGGGGCTAACTTTTCCT  270
V  90.2% (221/245)  IGHV4-59*01  229  ..G.........AAGC..AGC.............................T..C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-3*01   4    --------------------------------------------------------------------......----------------  9

                                      -->                                  
                                       F  W  G  P  G  T  M  V  T  V  S  S  
                    Query_8125   271  TTCTGGGGCCCAGGGACAATGGTCACCGTCTCCTCAG  307
J  94.4% (34/36)    IGHJ3*01     15   -.........A.....................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_319754

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            378     3e-107
IGHD1-26*01                                                                                           12.2    35    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y
                    Query_8126   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACCACTTA  90
V  91.7% (266/290)  IGHV1-8*01   6    ..................G...............................................T........C..........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F  A  Q
                    Query_8126   91   TGATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTTGCACA  180
V  91.7% (266/290)  IGHV1-8*01   96   .................................A..G..............A..............C.G...T..........A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D  T  A
                    Query_8126   181  GAGATTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGACACGGC  270
V  91.7% (266/290)  IGHV1-8*01   186  ..AG...C............................C.....A.................GC............G..C..AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_8126   271  CATATATTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  352
V  91.7% (266/290)  IGHV1-8*01   276  .G.G................--------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   -----------------------------...G.....--------------------------------------------  18
J  100.0% (40/40)   IGHJ5*02     11   ------------------------------------------........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_319756

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           357     1e-100
IGHD3-10*01                                                                                           12.2    30    
IGHJ5*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CGGGGA	TTCCCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGATTCCCCTTCGACCCC	ARRGFPFDP	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  P  G  F  S  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8127   1    GGTCCCTGAGACTCTCCTGTGTAGCCCCTGGATTCAGCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-48*03  47   .....................C....T.........C.....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  R  G  S  T  I  Y  Y  A  D  S  V  T  G  R  F  T  I  S  R  G  N  A  
                    Query_8127   91   AGTGGGTTTCCTACATTAGTAGTCGTGGTAGTACCATATACTACGCAGACTCTGTGACGGGCCGATTCACCATCTCCAGAGGCAACGCCA  180
V  96.0% (238/248)  IGHV3-48*03  137  ..........A............A.................................A.......................A........  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  S  A  R  R  G  F  P  F  D  P  
                    Query_8127   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTCTGCGAGACGGGGATTCCCCTTCGACCCCT  270
V  96.0% (238/248)  IGHV3-48*03  227  ....C...............................................T.......G.......----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01  15   --------------------------------------------------------------------......----------------  20
J  100.0% (43/43)   IGHJ5*02     9    --------------------------------------------------------------------------------..........  18

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8127   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (43/43)   IGHJ5*02     19   .................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_319757

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           335     4e-94
IGHD3-22*01                                                                                           25.7    0.003
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCCCA	ATTACTTTGATGGTAGTGG	CG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCCCAATTACTTTGATGGTAGTGGCGACTGGAACCTCGATCTC	AKDPNYFDGSGDWNLDL	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  T  S  Y  G  M  H  W  V  R  R  A  P  G  K  G  L  
                    Query_8128   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCACTAGTTATGGCATGCACTGGGTCCGCCGGGCTCCAGGCAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-30*18  47   ....................................C.....G...C......................A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  Y  D  G  S  N  K  Y  S  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8128   91   AATGGGTGGCCAGTATCTCATATGATGGAAGCAATAAATACTCTGCAGCCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-30*18  137  .G........AGT...A..............T..........A.....A.........................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  V  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  P  N  Y  F  D  G  
                    Query_8128   181  GGAACACGGTCTATTTGCAAATGAACAGCCTGAGACCTGAAGACACGGCTGTGTATTACTGTGCGAAAGACCCCAATTACTTTGATGGTA  270
V  92.8% (232/250)  IGHV3-30*18  227  A.......C.G...C....................G....G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  89.5% (17/19)    IGHD3-22*01  3    ---------------------------------------------------------------------------......A....A...  17

                                      GT-------------------->                                  
                                      S  G  D  W  N  L  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8128   271  GTGGCGACTGGAACCTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  327
D  89.5% (17/19)    IGHD3-22*01  18   ....-----------------------------------------------------  21
J  96.1% (49/51)    IGHJ2*01     3    ------.....T..T..........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_8350

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           349     3e-98
IGHD5-12*01                                                                                           12.2    38   
IGHJ4*02                                                                                              46.8    3e-09


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD5-12*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCGGATTTTCCTCTGATGGAC	GTGAATATA	TGACCCCGCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCGGATTTTCCTCTGATGGACGTGAATATATGACCCCGCTCTTTGACTTT	ARAGFSSDGREYMTPLFDF	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	69	6	0	92
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	19	5	0	79.2
FR3-IMGT	178	291	114	98	16	0	86
CDR3-IMGT (germline)	292	296	5	5	0	0	100
Total	N/A	N/A	293	258	35	0	88.1


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I 
                    Query_8129   4    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGACGATCTCTTGCCAGGCTTCCGGTTACAGCTTTATC  93
V  88.1% (258/293)  IGHV1-18*04  1    .............................G.........................A.G....C...A.......T.......C.....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  F  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  A  H  R  G  D  T  K  * 
                    Query_8129   94   AACTTCGGTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTCGAATGGCTGGGATGGATCAGCGCGCACAGAGGTGACACAAAATAA  183
V  88.1% (258/293)  IGHV1-18*04  91   .G..A.................................A.....T..G...A................TT...AT...A.......C..T  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  F  L  D  V  R  S  L  R  S  D  D 
                    Query_8129   184  GCACAGAGTTTCCAGGGCAGAGTCACCATGACCACAGACACACTCACGGGAACAGCGTTCCTGGACGTGAGGAGCCTGCGATCTGACGAC  273
V  88.1% (258/293)  IGHV1-18*04  181  .......AGC................................TC....A.C.....C.A.A....GC...........A...........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  V  Y  Y  C  A  R  A  G  F  S  S  D  G  R  E  Y  M  T  P  L  F  D  F  W  G  Q  G  T 
                    Query_8129   274  ACGGCCGTTTATTACTGTGCGAGGGCCGGATTTTCCTCTGATGGACGTGAATATATGACCCCGCTCTTTGACTTTTGGGGCCAGGGAACC  363
V  88.1% (258/293)  IGHV1-18*04  271  ........G..............-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  88.9% (8/9)      IGHD5-12*01  1    ----------------------------------------------...G.....-----------------------------------  9
J  87.2% (34/39)    IGHJ4*02     5    -----------------------------------------------------------------........AC...............  29

                                                    
                                       P  V  F  V  S
                    Query_8129   364  CCGGTCTTCGTCTC  377
J  87.2% (34/39)    IGHJ4*02     30   .T....AC......  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_297359

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TG	ACGATTTTTGGAGTGG	CCCCGTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACGATTTTTGGAGTGGCCCCGTCCTACTTTGACTCC	ARVTIFGVAPSYFDS	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  H  T  R  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_8130   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCACACTCGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*01  49   ....................................AT..G.A..........................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8130   91   TGGATTGGGTATATCCATTACAGTGGGAGCACCAATTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAT  180
V  95.9% (234/244)  IGHV4-59*01  139  ...............T...................C.....C...............................................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  T  I  F  G  V  A  P  S 
                    Query_8130   181  CAGTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTGACGATTTTTGGAGTGGCCCCGTCC  270
V  95.9% (234/244)  IGHV4-59*01  229  ...............C................................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (16/16)   IGHD3-3*01   6    ------------------------------------------------------------------................--------  21
J  95.7% (45/47)    IGHJ4*02     2    -----------------------------------------------------------------------------------------.  2

                                      ----------->                                  
                                       Y  F  D  S  W  A  Q  G  T  L  V  T  V  S  S  
                    Query_8130   271  TACTTTGACTCCTGGGCCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.7% (45/47)    IGHJ4*02     3    ..........A.....G.............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_147810

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            322     2e-90
IGHD3-3*01                                                                                            39.1    3e-07
IGHJ5*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGTCGTCGCCGAA	ACGATTTTTGGAGTGGTTAT	GAGAT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGTCGTCGCCGAAACGATTTTTGGAGTGGTTATGAGATCTGGTTCGATTCA	ARLRRRRNDFWSGYEIWFDS	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  I  A  S  E  F  T  F  G  S  H  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8131  1    GGTCCCTGAGACTCTCCTGTATAGCCTCTGAATTCACCTTTGGTAGCCATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.5% (227/248)  IGHV3-7*01  47   ....................GC........G..........A.....T..........C...............................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  N  Q  D  G  T  E  T  N  Y  V  A  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8131  91   AGTGGGTGGCCAACATAAACCAGGATGGAACGGAGACAAACTATGTGGCCTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.5% (227/248)  IGHV3-7*01  137  ...................G..A.......GT....A.T.........A.........................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------------CD
                                     R  D  S  L  F  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  A  R  L  R  R  R  R  N  D  
                    Query_8131  181  GGGATTCACTGTTTCTACAAATGAATAGCCTGAGAGTCGACGACACGGCTGTGTATTACTGTGCGAGACTTCGTCGTCGCCGAAACGATT  270
V  91.5% (227/248)  IGHV3-7*01  227  A.A.C.......A...G........C..........C...G...........................----------------------  294
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (20/20)   IGHD3-3*01  6    ------------------------------------------------------------------------------------......  11

                                     R3-IMGT------------------------>                                  
                                     F  W  S  G  Y  E  I  W  F  D  S  W  G  Q  G  S  L  L  T  V  S  S  
                    Query_8131  271  TTTGGAGTGGTTATGAGATCTGGTTCGATTCATGGGGCCAGGGAAGCCTGCTCACCGTCTCCTCAG  336
D  100.0% (20/20)   IGHD3-3*01  12   ..............----------------------------------------------------  25
J  89.4% (42/47)    IGHJ5*01    5    -------------------.........C..C........A....C....G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_46393

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           419     2e-119
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	CCGCCTTCCCTAGCGACACCGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGCCTTCCCTAGCGACACCGGGTACTTTGACTAC	ARAAFPSDTGYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  D  T  F  T  R  Y
                    Query_8132   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGAGACACCTTCACCAGGTA  90
V  96.2% (279/290)  IGHV1-46*01  6    ..................G......................................................T.............C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  S  G  A  T  K  Y  A  Q
                    Query_8132   91   CTTTATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTAGTGGAGCCACAAAATACGCACA  180
V  96.2% (279/290)  IGHV1-46*01  96   ..A................................................................G....TAG.....GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  I  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_8132   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAATCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  96.2% (279/290)  IGHV1-46*01  186  .................................................G........................................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  A  A  F  P  S  D  T  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8132   271  CGTGTATTACTGTGCGAGAGCCGCCTTCCCTAGCGACACCGGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  96.2% (279/290)  IGHV1-46*01  276  ....................---------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                       
J  100.0% (46/46)   IGHJ4*02     3    -------------------------------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_147817

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           324     9e-91
IGHD6-19*01                                                                                           18.0    0.66 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCACCGGTGG	AGCAATGGCTGG	GGAACATACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCACCGGTGGAGCAATGGCTGGGGAACATACTATAATTACGGTATGGACGCC	ARGHRWSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	21	3	6	70
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	17	4	0	81
FR3-IMGT	153	266	114	108	6	0	94.7
CDR3-IMGT (germline)	267	271	5	5	0	0	100
Total	N/A	N/A	271	241	24	6	88.9


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  P  F  T  D  S  G  Y  Y  W  N  W  
                    Query_8133   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGCCCTTCACTGACAGTGGTTATTATTGGAACTGGT  90
V  88.9% (241/271)  IGHV4-34*12  26   ........T.......T............T................C..T......T......------.......C..C....G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  
                    Query_8133   91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAACCCGTCCCTCCAGAGTCGAG  180
V  88.9% (241/271)  IGHV4-34*12  110  T.........C...........G.....G.............T.......AG.....G......................A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  I  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_8133   181  TCACCATATCAATAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.9% (241/271)  IGHV4-34*12  200  ...........G...............................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  W  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_8133   271  GGGGCCACCGGTGGAGCAATGGCTGGGGAACATACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.9% (241/271)  IGHV4-34*12  290  .----------------------------------------------------------------------------------------  290
                                                                                                                               
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  93.8% (45/48)    IGHJ6*02     15   -----------------------------------------.............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_147815

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           271     7e-75
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGCGCTGT	CAGTGTCTGGT	GGCGCT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCGCTGTCAGTGTCTGGTGGCGCTTACGGCATGGACTTC	ARGALSVSGGAYGMDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	96	18	0	84.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	211	38	0	84.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  T  A  Y  D  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8134   1    GGTCCCTGAGACTCTCCTGTGCAACGTCTGGCTTCACCTTCACTGCATATGACATGCACTGGGTCCGCCAGGCCCCAGGCAAGGGGCTGG  90
V  84.7% (211/249)  IGHV3-33*01  47   .......................G.......A..........G.AGC....G.....................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  G  V  A  D  V  R  H  D  G  T  K  T  Y  Y  S  D  A  V  E  G  R  F  T  M  S  R  D  N  S  
                    Query_8134   91   AGGGGGTGGCAGATGTGCGCCATGATGGCACTAAGACTTACTACTCAGACGCCGTGGAGGGCCGGTTCACCATGTCCAGAGACAATTCCA  180
V  84.7% (211/249)  IGHV3-33*01  137  ..T.........T.A.AT.GT.......A.G...T.AA.....TG.....T.....A.......A........C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  D  T  V  S  L  Q  M  N  G  L  R  V  E  D  T  G  V  Y  Y  C  A  R  G  A  L  S  V  S  G  
                    Query_8134   181  ATGACACAGTGTCCCTGCAAATGAACGGCCTGAGAGTCGAAGATACGGGTGTCTATTACTGTGCGAGAGGGGCGCTGTCAGTGTCTGGTG  270
V  84.7% (211/249)  IGHV3-33*01  227  .GA....GC...AT............A.........C...G..C....C...G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD6-19*01  9    ------------------------------------------------------------------------------.....G.....-  19

                                      T------------------>                                 
                                      G  A  Y  G  M  D  F  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_8134   271  GCGCTTACGGCATGGACTTCTGGGGCCAAGGGACCACGGTTATCGTCTCGTCA  323
J  89.6% (43/48)    IGHJ6*02     15   -----.....T......G......................C.C......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_46394

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         349     2e-98
IGHD5-12*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGAGGAT	TGGCTACGA	GACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGACCCCCTTTGACCTC	ARAGRIGYETPFDL	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_8135     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTACTCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  95.1% (235/247)  IGHV4-38-2*02  49   ................................................T.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K 
                    Query_8135     91   GAGTGGATTGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAG  180
V  95.1% (235/247)  IGHV4-38-2*02  139  ......................A.........C.........A..............A........................C.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  Q  F  S  L  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  T 
                    Query_8135     181  AACCAGTTCTCGTTGAATCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGAGCGGGGAGGATTGGCTACGAGACC  270
V  95.1% (235/247)  IGHV4-38-2*02  229  ...........CC....G....G...........C...............G................-----------------------  295
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD5-12*01    11   -----------------------------------------------------------------------------.........----  19

                                        ----------->                                  
                                         P  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8135     271  CCCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.5% (42/44)    IGHJ4*02       5    --.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_147819

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           360     1e-101
IGHD1-26*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGG	ATAGTGGGAGCT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGGATAGTGGGAGCTACTACTTTGACTAC	ARDLDSGSYYFDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	24	0	0	100
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	23	1	0	95.8
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	232	231	1	0	99.6


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  
                    Query_8136   14   GTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTA  103
V  99.6% (231/232)  IGHV3-48*03  65   ..........................................................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  S  G  S  I  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_8136   104  GTAGTAGTGGTAGTATCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGC  193
V  99.6% (231/232)  IGHV3-48*03  155  ...............C..........................................................................  244
                                      S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><--------------CDR3-IMGT-------------->       
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  D  S  G  S  Y  Y  F  D  Y  W  G  
                    Query_8136   194  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATCTGGATAGTGGGAGCTACTACTTTGACTACTGGGGCC  283
V  99.6% (231/232)  IGHV3-48*03  245  ....................................................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (12/12)   IGHD1-26*01  4    ---------------------------------------------------------............---------------------  15
J  100.0% (48/48)   IGHJ4*02     1    ---------------------------------------------------------------------.....................  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_8136   284  AGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (48/48)   IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_46395

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            12.2    32   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCCTCCTCGA	TACGAT	CCCACCGT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATTCCTCCTCGATACGATCCCACCGTTACGGTATGGACATC	ARDSSSIRSHRYGMDI	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8137   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTCAGTAGTTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-74*01  47   ........................C.....................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  H  I  N  S  D  G  G  T  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8137   91   TGTGGGTCTCACATATTAATAGCGATGGGGGTACCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-74*01  137  ............G.........T......A...G.....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  K  T  L  Y  L  Q  L  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  S  S  S  I  R  S  
                    Query_8137   181  AGAAAACCTTGTATCTGCAATTGAACAGTCTGAGAGGCGAGGACACGGCTGTATATTACTGCGCAAGAGATTCCTCCTCGATACGATCCC  270
V  94.4% (236/250)  IGHV3-74*01  227  ....C..GC...........A...............C...............G........T........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-3*01   5    ---------------------------------------------------------------------------------......---  10

                                      T------------------>                                 
                                      H  R  Y  G  M  D  I  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8137   271  ACCGTTACGGTATGGACATCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  97.9% (47/48)    IGHJ6*02     15   -----............G...................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_332519

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            308     4e-86
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCATCTTTCAA	CAGCAGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCATCTTTCAACAGCAGGTACTCGGGGTTTTGACTAC	ASHLSTAGTRGFDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	221	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  V  G  S  I  T  S  A  N  W  W  S  W  V  R  Q  P  P  G  R  G  L 
                    Query_8138   1    ACCCTGTCCCTCACCTGCGATGTCTCTGTTGGCTCCATCACCAGTGCTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAGGGGACTG  90
V  90.2% (221/245)  IGHV4-4*01   49   ...................C........G...........G....AG...................................A...G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  K  S  N  Y  S  P  S  L  R  G  R  V  T  I  S  V  D  K  S  M 
                    Query_8138   91   GAGTGGATTGGGGAAATCTATCATGGTGGGAAGTCCAACTACAGTCCGTCCCTCAGGGGTCGCGTCACCATTTCAGTGGACAAGTCCATG  180
V  90.2% (221/245)  IGHV4-4*01   139  ........................A......GCA.........AC..........A.A....A........A.....A..........A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  S  H  L  S  T  A  G  T  R 
                    Query_8138   181  AACCAGTTCTCCCTGAAGCTGAATTCTGTGACCGCCGCGGACACGGCCGTATACTTCTGTGCGAGCCATCTTTCAACAGCAGGTACTCGG  270
V  90.2% (221/245)  IGHV4-4*01   229  ......................GC..........................G..T.G.........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  90.0% (9/10)     IGHD6-13*01  12   ----------------------------------------------------------------------------....T.....----  21

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_8138   271  GGTTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02     6    ---.....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_208105

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-9*01                                                                                            14.1    8.4  
IGHJ2*01                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTACGC	TTTTGAC	GGCA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTACGCTTTTGACGGCAACTGGTACTTCGATCTC	AREYAFDGNWYFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8139   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGCCATGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ...............................................T...................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  T  T  G  G  S  T  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_8139   91   AGTGGGTTTCAGCTATTACTACTACTGGTGGTAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  .......C..........G.GG..G.............T................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  M  E  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  Y  A  F  D  G  N  
                    Query_8139   181  AGAACACGTTGTCTATGGAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAGAGAGTACGCTTTTGACGGCAACT  270
V  94.0% (235/250)  IGHV3-23*01  227  ........C...A.C..C......................G.........................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-9*01   12   ----------------------------------------------------------------------------.......-------  18
J  100.0% (51/51)   IGHJ2*01     3    ---------------------------------------------------------------------------------------...  5

                                      ------------->                                  
                                      W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8139   271  GGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  318
J  100.0% (51/51)   IGHJ2*01     6    ................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_208106

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           350     8e-99
IGHD3-16*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAATC	TTGGGGGAG	CCGCCCAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAATCTTGGGGGAGCCGCCCAGATTGACTAC	ARVNLGGAAQIDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  H  Y  W  S  W  M  R  Q  P  P  G  K  G 
                    Query_8140   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGGTAGTCACTACTGGAGCTGGATGCGGCAGCCCCCAGGGAAGGGA  90
V  94.8% (237/250)  IGHV4-61*01  49   .........................................C.........T................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  N  Y  E  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_8140   91   CTGGAGTGGATTGGGAATATCTATTATAGTGGGAGCACCAACTACGAACCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCC  180
V  94.8% (237/250)  IGHV4-61*01  139  ...............T..........C..................A.C..............................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  N  S  L  T  A  A  D  T  A  V  H  F  C  A  R  V  N  L  G  G  A  A 
                    Query_8140   181  AAGAACCAGTTCTCCCTGAAACTGAACTCTTTGACCGCTGCGGACACGGCCGTGCATTTCTGTGCGAGAGTTAATCTTGGGGGAGCCGCC  270
V  94.8% (237/250)  IGHV4-61*01  229  ....................G....G....G.......................T...A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  16   ----------------------------------------------------------------------------.........-----  24

                                      ----------->                                  
                                       Q  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8140   271  CAGATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (42/42)   IGHJ4*02     7    ----..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_208107

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-9*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCGGTT	GTATTACGATATCTTG	CGGCGGGGAGG	CTACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGTTGTATTACGATATCTTGCGGCGGGGAGGCTACAACGGTTTGGACGTC	ARGRLYYDILRRGGYNGLDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  V  G  S  F  S  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8141   1    ACCCTGTCCCTCACCTGCGCTGTCTATGTTGGGTCCTTCAGTGATTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (233/245)  IGHV4-34*01  49   ............................G..............G..............................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  N  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8141   91   TGGATTGGCGAAATCAATCATAGTGGATCCAACAGCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  ........G..................AG..C..A.......................................A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  D  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  L  Y  Y  D  I  L  R 
                    Query_8141   181  CAGTTCTCCCTGAAGCTGGACTCCGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCCGGTTGTATTACGATATCTTGCGG  270
V  95.1% (233/245)  IGHV4-34*01  229  ..................AG...T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  93.8% (15/16)    IGHD3-9*01   1    -----------------------------------------------------------------------............T...---  16

                                      GT------------------------>                                 
                                       R  G  G  Y  N  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8141   271  CGGGGAGGCTACAACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
J  96.2% (50/52)    IGHJ6*02     11   --------....T.....A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_208100

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           341     5e-96
IGHD3-3*01                                                                                            39.1    3e-07
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GA	ATTACGATTTTTGGAGGGGTTAT	AATTCTAATCT	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAATTACGATTTTTGGAGGGGTTATAATTCTAATCTCGGTATGGACGTC	ARNYDFWRGYNSNLGMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	230	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  A  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8142   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTGCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.0% (230/242)  IGHV4-59*01  49   .............................................TA...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  S  S  G  S  T  K  Y  N  P  S  L  G  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8142   91   TGGATTGGCTATGTCTATTCCAGTGGGAGCACCAAGTACAACCCCTCCCTCGGGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.0% (230/242)  IGHV4-59*01  139  ........G...A......A...............C...............AA.....................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  N  Y  D  F  W  R  G  Y  N 
                    Query_8142   181  CAGTTCTCCCTGAAAGTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGAATTACGATTTTTGGAGGGGTTATAAT  270
V  95.0% (230/242)  IGHV4-59*01  229  ..............GC...G..........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.7% (22/23)    IGHD3-3*01   3    ----------------------------------------------------------------................T......---  25

                                      -------------------->                                
                                       S  N  L  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_8142   271  TCTAATCTCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  323
J  100.0% (45/45)   IGHJ6*02     17   --------.............................................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_208101

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGTACCA	N/A	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGTACCAACTGCTACTACCAAATGGACGTC	ARVDCSSTNCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_8143   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.0% (222/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_8143   91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.0% (222/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  N  C  Y 
                    Query_8143   181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTATTGTGCGAGAGTGGACTGTAGTAGTACCAACTGCTAC  270
V  91.0% (222/244)  IGHV4-59*01  229  C..............................CT..............G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD2-2*01   8    ---------------------------------------------------------------------.............--------  20
J  89.3% (50/56)    IGHJ6*02     7    ----------------------------------------------------------------------------------...A....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  T  V  I  V  S  S 
                    Query_8143   271  TACCAAATGGACGTCTGGGGCCTAGGGACCACGGTCATCGTCTCCTCA  318
J  89.3% (50/56)    IGHJ6*02     15   ...GGT................A..............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_208102

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           329     3e-92
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCGA	TCGGCGCGGA	TCGGGGAG	CCTATTGTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACCGATCGGCGCGGATCGGGGAGCCTATTGTCCTACTACTACGCTATGGACGTC	TTDRRGSGSLLSYYYAMDV	249	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	24	6	0	80
FR3-IMGT	135	248	114	101	13	0	88.6
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	233	23	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8144   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAAGGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.0% (233/256)  IGHV3-15*01  47   .......T......................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  H  I  K  S  R  A  D  G  G  T  T  D  Y  A  A  P  V  R  G  R  Y  T  I  S  R  D  
                    Query_8144   91   AGTGGGTTGGCCATATTAAAAGCAGAGCGGACGGTGGAACCACAGACTACGCTGCACCCGTGAGAGGAAGATACACCATCTCAAGAGATG  180
V  91.0% (233/256)  IGHV3-15*01  137  ............G...........A.A.T..T.....G..A......................A...C....T.................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  R  N  T  L  F  L  Q  M  N  S  L  R  T  E  D  T  G  V  F  Y  C  T  T  D  R  R  G  S  
                    Query_8144   181  ATTCAAGAAACACGTTGTTTCTTCAGATGAACAGCCTGAGGACCGAGGACACAGGCGTCTTTTACTGTACCACCGATCGGCGCGGATCGG  270
V  91.0% (233/256)  IGHV3-15*01  227  ......A.......C...A...G..A.............AA.............C...G.A............A..--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (8/8)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      --CDR3-IMGT----------------------->                                 
                                      G  S  L  L  S  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_8144   271  GGAGCCTATTGTCCTACTACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  338
D  100.0% (8/8)     IGHD3-10*01  18   ....----------------------------------------------------------------  21
J  96.4% (53/55)    IGHJ6*02     8    -------------...........G...............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_208103

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            349     3e-98
IGHD2-15*01                                                                                           46.8    1e-09
IGHJ2*01                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-15*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACGAG	AGGATATTGTAGGGGTGGTAACTGCTACTC	TCAGGGCCCCTGGGTAAGACCTGGGGCGAAAGCCCCACTGACAC	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACGAGAGGATATTGTAGGGGTGGTAACTGCTACTCTCAGGGCCCCTGGGTAAGACCTGGGGCGAAAGCCCCACTGACACGGTACTTCGATCTC	ARTRGYCRGGNCYSQGPWVRPGAKAPLTRYFDL	243	341	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8145   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGGTTTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.1% (235/247)  IGHV3-7*03   47   ..............................................C.A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  K  H  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_8145   91   AGTGGGTGGCCAATATAAAGGAAGATGGAAGTGAGAAGCACTATGTGGACTCTGTGGAGGGTCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.1% (235/247)  IGHV3-7*03   137  .............C......C................AT.................A....C............................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  I  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  T  R  G  Y  C  R  G  
                    Query_8145   181  AGAACTCACTGTATCTGCAAATAAATAGCCTGAGAGTCGAAGACACGGCCGTGTATTACTGTGCGAGGACGAGAGGATATTGTAGGGGTG  270
V  95.1% (235/247)  IGHV3-7*03   227  ......................G..C..........C...G..........................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.3% (28/30)    IGHD2-15*01  1    -------------------------------------------------------------------------............T....  17

                                      -----------------CDR3-IMGT-------------------------------------------->                   
                                      G  N  C  Y  S  Q  G  P  W  V  R  P  G  A  K  A  P  L  T  R  Y  F  D  L  W  G  R  G  T  L  
                    Query_8145   271  GTAACTGCTACTCTCAGGGCCCCTGGGTAAGACCTGGGGCGAAAGCCCCACTGACACGGTACTTCGATCTCTGGGGCCGTGGCACCCTGG  360
D  93.3% (28/30)    IGHD2-15*01  18   ...G.........-----------------------------------------------------------------------------  30
J  100.0% (48/48)   IGHJ2*01     6    ---------------------------------------------------------.................................  38

                                                     
                                      V  T  V  S  S  
                    Query_8145   361  TCACTGTCTCCTCAG  375
J  100.0% (48/48)   IGHJ2*01     39   ...............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_56647

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           316     2e-88
IGHD2-2*01                                                                                            14.1    8.7  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGCTCGTTGTGATAA	TACCATCTGC	CCGAAAAACTTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTCGTTGTGATAATACCATCTGCCCGAAAAACTTGCTGGTTCGACCCC	ARGLVVIIPSARKTCWFDP	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  D  I  S  I  N  T  G  D  Y  Y  W  S  W  F  R  Q  S  P  Q  K  G 
                    Query_8146   1    ACCCTGTCCCTCACCTGCACTGTCTCTGATATCTCCATCAACACCGGTGATTACTATTGGAGCTGGTTCCGCCAGTCCCCACAGAAGGGC  90
V  90.7% (225/248)  IGHV4-31*03  49   ............................G.GG........G..GT....G......C.........A........CA....GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  F  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S 
                    Query_8146   91   CTGGAATGGATTGGGTACATCTATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAGGAGTCGAGTTAGCATTTCCATAGACACGTCT  180
V  90.7% (225/248)  IGHV4-31*03  139  .....G..................................A.................A...........C...A..AG...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  V  V  I  I  P 
                    Query_8146   181  AAGAACCAGTTCTCCCTGAAGGTGAACTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGGGGGCTCGTTGTGATAATACCA  270
V  90.7% (225/248)  IGHV4-31*03  229  .....................C...G...........................G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.0% (9/10)     IGHD2-2*01   16   -------------------------------------------------------------------------------------.....  20

                                      3-IMGT----------------------->                                  
                                       S  A  R  K  T  C  W  F  D  P  W  G  P  G  T  L  V  S  V  S  S  
                    Query_8146   271  TCTGCCCGAAAAACTTGCTGGTTCGACCCCTGGGGCCCGGGAACCCTGGTCAGCGTCTCCTCAG  334
D  90.0% (9/10)     IGHD2-2*01   21   G....-----------------------------------------------------------  25
J  95.7% (45/47)    IGHJ5*02     5    -----------------....................A..............C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_56646

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8147   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8147   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_8147   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  98.0% (49/50)    IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                 
                                       D  P  W  G  Q  G  A  L  V  T  V  S  S 
                    Query_8147   271  GACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCA  309
J  98.0% (49/50)    IGHJ5*02     12   ..................A....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_332513

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           378     3e-107
IGHD2-21*02                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CTCC	TGTGGTGGTGACTGCT	CGGGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGACTCCTGTGGTGGTGACTGCTCGGGGTAC	TRDSCGGDCSGY	249	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	249	7	0	97.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8148   1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTCTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.3% (249/256)  IGHV3-49*04  47   .....................................................A....................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  N  K  A  Y  G  E  T  A  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  E  
                    Query_8148   91   AGTGGGTAGGTTTCATTAGAAACAAAGCTTATGGTGAGACAGCAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGAGG  180
V  97.3% (249/256)  IGHV3-49*04  137  .....................G..............G....A..............................................T.  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------CDR3-IMG
                                      D  S  K  N  I  A  Y  L  Q  M  D  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  D  S  C  G  G  
                    Query_8148   181  ATTCCAAAAACATCGCCTATCTGCAAATGGACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGAGACTCCTGTGGTGGTG  270
V  97.3% (249/256)  IGHV3-49*04  227  .........G...................A..............................................--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (16/16)   IGHD2-21*02  8    --------------------------------------------------------------------------------..........  17

                                      T------------>                                  
                                      D  C  S  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8148   271  ACTGCTCGGGGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (16/16)   IGHD2-21*02  18   ......------------------------------------------  23
J  100.0% (37/37)   IGHJ4*02     12   -----------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_56644

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           296     2e-82
IGHD1-26*01                                                                                           12.2    31   
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARAKGIAVIVDAFDF	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	98	16	0	86
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	216	27	0	88.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_8149   4    CCCTGAGACTCTCCTGCTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAGT  93
V  88.9% (216/243)  IGHV4-59*01  50   .....TCC...A.....A.....................G............................C....A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  V  S  V  D  M  S  N  N  
                    Query_8149   94   GGATTGGATATATCTATTACAGAGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAGACATGTCCAACAACC  183
V  88.9% (216/243)  IGHV4-59*01  140  .......G..............T....G.....A......C.....CC................CA.A..........C......G....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  K  G  I  A  V  I  V  D  
                    Query_8149   184  GGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGTGCGAGAGCTAAGGGTATCGCTGTTATAGTAGATG  273
V  88.9% (216/243)  IGHV4-59*01  230  A...........AG.................T.......CG.....G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD1-26*01  3    -------------------------------------------------------------------------------......-----  8
J  91.8% (45/49)    IGHJ3*01     2    --------------------------------------------------------------------------------------....  5

                                      ---------->                                  
                                      A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_8149   274  CTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  318
J  91.8% (45/49)    IGHJ3*01     6    ........G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_208108

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            442     2e-126
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	287	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_8150   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  98.6% (287/291)  IGHV1-2*04   6    ..................G.............AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_8150   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.6% (287/291)  IGHV1-2*04   96   ..........................................................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_8150   181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  98.6% (287/291)  IGHV1-2*04   186  ..........................................................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W  G  Q
                    Query_8150   271  CGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGGGGCCA  360
V  98.6% (287/291)  IGHV1-2*04   276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------------------....A...........................  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_8150   361  AGGGACCACGGTCACCGTCTCCTCA  385
J  98.2% (56/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_208109

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD6-13*01                                                                                           21.8    0.039 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGAG	AGCAGCAGCTG	AA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGAGCAGCAGCTGAATGACTAC	ARDREQQLNDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8151   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  V  S  S  I  S  S  S  S  S  Y  M  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_8151   91   AGTGCGTCTCATCCATTAGTAGTAGCAGTAGTTACATGTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACGACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  ....G....................T...........A.............................................A......  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  E  Q  Q  L  N  
                    Query_8151   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGAGAGCAGCAGCTGAATG  270
V  98.4% (246/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  7    ---------------------------------------------------------------------------...........----  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8151   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (41/41)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_332517

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           350     9e-99
IGHD3-3*01                                                                                            39.1    3e-07
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTACC	GTACAAAAAGAATCGGATG	ATTACGATTTTTGGAGTGGT	AAAGAGCCCCAAACCG	ACTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCGTACAAAAAGAATCGGATGATTACGATTTTTGGAGTGGTAAAGAGCCCCAAACCGACTCGTTCGACCCC	RTKRIG*LRFLEW*RAPNRLVRP	250	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	249	115	111	3	1	96.5
CDR3-IMGT (germline)	250	252	3	3	0	0	100
Total	N/A	N/A	252	240	11	1	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  L  T  F  S  K  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8152   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTGACCTTCAGTAAAGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (240/252)  IGHV3-15*01  47   .......T............G.............C..T........C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  T  K  N  D  V  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_8152   91   AGTGGGTTGGCCGTATTAAAACCAAAAATGATGTTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  95.2% (240/252)  IGHV3-15*01  137  .....................G.....C.....G........................................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT-----------------------------------------------------><--------------------
                                      D  S  K  K  H  T  V  S  A  N  E  *  P  E  N  R  G  H  S  S  V  L  L  Y  R  T  K  R  I  G  
                    Query_8152   181  ATTCAAAAAAACACACTGTATCTGCAAATGAATAGCCTGAAAACCGAGGACACAGCAGTGTATTACTGTACCGTACAAAAAGAATCGGAT  270
V  95.2% (240/252)  IGHV3-15*01  227  ....-.........G.................C.......................C...............------------------  297
                                      D  S   K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                   

                                      -----------CDR3-IMGT------------------------------>                                  
                                      *  L  R  F  L  E  W  *  R  A  P  N  R  L  V  R  P  L  G  P  G  N  P  G  H  R  L  L   
                    Query_8152   271  GATTACGATTTTTGGAGTGGTAAAGAGCCCCAAACCGACTCGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  355
D  100.0% (20/20)   IGHD3-3*01   3    -....................----------------------------------------------------------------  22
J  95.8% (46/48)    IGHJ5*02     4    -------------------------------------...G................................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_332516

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATCGTGGTG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATCGTGGTGACTACTTTGACCAC	ARGLHYYDRGDYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8153   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (242/250)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_8153   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAATAAGTCCCTCAAGAGTCGAATTACCATATCGGTAGACACGTCT  180
V  96.8% (242/250)  IGHV4-31*03  139  ..................................G............CCC................G..........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R 
                    Query_8153   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCCATTACTATGATCGT  270
V  96.8% (242/250)  IGHV4-31*03  229  .....................................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (16/18)    IGHD3-22*01  3    ----------------------------------------------------------------------------...........A..  16

                                      ----------------->                                  
                                       G  D  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8153   271  GGTGACTACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  88.9% (16/18)    IGHD3-22*01  17   A...------------------------------------------------  20
J  97.9% (47/48)    IGHJ4*02     1    ----...........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_333648

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            403     1e-114
IGHD3-10*01                                                                                           14.1    8.8   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TCGGGGA	CTCCTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATCGGGGACTCCTGTTTGACTTC	ARDRGLLFDF	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	26	1	0	96.3
FR3-IMGT	159	272	114	107	7	0	93.9
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	280	269	11	0	96.1


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  G  I  S  G  D  S  V  S  S  D  T  A  A  W  N  W  
                    Query_8154   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGGCATCTCCGGGGACAGTGTCTCTAGCGACACTGCTGCTTGGAACTGGA  90
V  96.1% (269/280)  IGHV6-1*01   26   ..........................................C.........................A...G.................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  K  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_8154   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAAGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAGG  180
V  96.1% (269/280)  IGHV6-1*01   116  ...................................................G....................................AA  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      G  R  I  T  I  N  S  D  T  S  K  N  Q  F  S  L  H  L  N  S  M  T  P  E  D  T  A  V  Y  Y  
                    Query_8154   181  GTCGAATAACCATCAACTCAGACACATCCAAGAACCAGTTCTCCCTGCACCTGAACTCTATGACTCCCGAGGACACGGCTGTATACTACT  270
V  96.1% (269/280)  IGHV6-1*01   206  .................C...............................G.........G......................G..T....  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------CDR3-IMGT--------->                                  
                                      C  A  R  D  R  G  L  L  F  D  F  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_8154   271  GTGCAAGAGATCGGGGACTCCTGTTTGACTTCTGGGGCCAGGGAATCCTGGTCACCGTCTCGTCAG  336
V  96.1% (269/280)  IGHV6-1*01   296  ..........--------------------------------------------------------  305
                                      C  A  R                                                           
D  100.0% (7/7)     IGHD3-10*01  14   ----------.......-------------------------------------------------  20
J  93.0% (40/43)    IGHJ4*02     6    -----------------------.......A..............C...............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_333649

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           343     2e-96
IGHD3-16*02                                                                                           35.3    4e-06
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGTGACC	ATGATGACGTTTGGGGGATTTGTCGTT	N/A	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGTGACCATGATGACGTTTGGGGGATTTGTCGTTCC	ARVGDHDDVWGICRS	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  S  G  I  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  
                    Query_8155   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCGTCAGCAGTGGTATTTACTACTGGAGCTGGATCCGACAGCCCCCAGGGAAGAGAC  93
V  94.0% (234/249)  IGHV4-61*01  50   .....TCC...A....C...............................G.....................G...............G...  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  M  Y  Y  S  G  S  P  K  Y  N  P  S  L  K  S  R  A  T  I  S  L  H  T  S  
                    Query_8155   94   TGGAGTGGATTGGGTATATGTATTACAGTGGGAGCCCCAAGTACAACCCCTCCCTCAAGAGTCGAGCCACCATATCATTACACACGTCCA  183
V  94.0% (234/249)  IGHV4-61*01  140  ...................C...............A....C.........................T..........G..G.........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  V  G  D  H  D  D  V  
                    Query_8155   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGAGCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTAGGTGACCATGATGACGTTT  273
V  94.0% (234/249)  IGHV4-61*01  230  .................................C...................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (24/27)    IGHD3-16*02  6    ------------------------------------------------------------------------------.....T......  17

                                      ---------------->                                  
                                      W  G  I  C  R  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8155   274  GGGGGATTTGTCGTTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  88.9% (24/27)    IGHD3-16*02  18   ......G..A.....------------------------------------  32
J  100.0% (36/36)   IGHJ5*02     16   ---------------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_333642

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           333     1e-93
IGHD3-3*01                                                                                            14.1    8.4  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	CTG	TTTTTGG	CGCGGCGAATGATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCTGTTTTTGGCGCGGCGAATGATAACTACGGTATGAACGTC	ARAVFGAANDNYGMNV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	24	0	0	100
FR2-IMGT	49	99	51	49	2	0	96.1
CDR2-IMGT	100	123	24	21	3	0	87.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	231	222	9	0	96.1


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  H  I  
                    Query_8156   14   GTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGACTGGTGTGGGTCTCACATATTA  103
V  96.1% (222/231)  IGHV3-74*01  65   ...................................................................G................G.....  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  M  D  G  S  S  T  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  K  N  M  L  Y  L  
                    Query_8156   104  ATATGGATGGGAGTAGTACAAACTACGCGGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCAAGAACATGCTGTATCTGC  193
V  96.1% (222/231)  IGHV3-74*01  155  ...GT...........C....G...............................A........................C...........  244
                                      N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  V  F  G  A  A  N  D  N  Y  G  M  N  
                    Query_8156   194  AAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCAAGAGCTGTTTTTGGCGCGGCGAATGATAACTACGGTATGAACG  283
V  96.1% (222/231)  IGHV3-74*01  245  ........................................C..........---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (7/7)     IGHD3-3*01   10   ------------------------------------------------------.......-----------------------------  16
J  96.0% (48/50)    IGHJ6*02     13   ---------------------------------------------------------------------------...........G...  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8156   284  TCTGGGGCCAAGGAACCACGGTCACCGTCTCCTCA  318
J  96.0% (48/50)    IGHJ6*02     28   .............G.....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_333640

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           413     2e-117
IGHD5-12*01                                                                                           10.3    134   
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	GTGGC	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGGCAACTACAACTACTACACTATGGACGTC	ARRGNYNYYTMDV	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  H
                    Query_8157   1    GCAGCTGGTGCAGTCTGGGGCAGAGGTGAAAGAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCCA  90
V  95.5% (277/290)  IGHV5-51*01  6    ..................A............A........................................................T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  S  P
                    Query_8157   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACAGCCC  180
V  95.5% (277/290)  IGHV5-51*01  96   C.......G........................................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  G  Q  V  T  M  S  V  D  K  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  A  A
                    Query_8157   181  GCCCTTCCAAGGCCAGGTCACCATGTCAGTCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACGCCGC  270
V  95.5% (277/290)  IGHV5-51*01  186  .T......................C....C.......................A...............................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                 
                                        S  Y  Y  C  A  R  R  G  N  Y  N  Y  Y  T  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8157   271  CAGCTATTACTGTGCGAGACGTGGCAACTACAACTACTACACTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  355
V  95.5% (277/290)  IGHV5-51*01  276  ..TG................-----------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD5-12*01  10   --------------------.....------------------------------------------------------------  14
J  94.9% (56/59)    IGHJ6*02     4    --------------------------.....T........GG...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_333646

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            403     9e-115
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	269	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	154	27	27	0	0	100
FR3-IMGT	155	268	114	113	1	0	99.1
CDR3-IMGT (germline)	269	275	7	7	0	0	100
Total	N/A	N/A	274	266	8	0	97.1


Alignments

                                     <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                      L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  I  R 
                    Query_8158  2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGATCAGG  91
V  97.1% (266/274)  IGHV6-1*01  31   ........G...T.G.......................................G......G....AG......................  120
                                      L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                     ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                      Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 
                    Query_8158  92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGA  181
V  97.1% (266/274)  IGHV6-1*01  121  ..........................................................................................  210
                                      Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                     --------------------------FR3-IMGT----------------------------------------------------><--
                                      I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_8158  182  ATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCA  271
V  97.1% (266/274)  IGHV6-1*01  211  .........A................................................................................  300
                                      I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                     --------CDR3-IMGT--------->                                  
                                      R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8158  272  AGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  332
V  97.1% (266/274)  IGHV6-1*01  301  ....---------------------------------------------------------  304
                                      R                                                           
J  97.9% (46/47)    IGHJ3*02    4    --------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_333647

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           332     4e-93
IGHD3-16*02                                                                                           33.4    1e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCAGGCCGG	TTACGTTTGGGGGAGGTTTCGTT	TTTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCAGGCCGGTTACGTTTGGGGGAGGTTTCGTTTTTCCTACGTTGACCAC	ARGQAGYVWGRFRFSYVDH	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  E  S  F  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_8159   4    CCCTGAGACTCTCCTGTGCTGTCTATGGTGAGTCCTTCAGTGGTTACTACTGGAACTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  93.4% (228/244)  IGHV4-34*01  50   .....TCC...A....C.............G.......................G...................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  R  H  S  G  S  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_8159   94   GGATTGGGGAAATCAGGCATAGTGGAAGCACCTACTACAACGCGTCCCTCAAGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAACC  183
V  93.4% (228/244)  IGHV4-34*01  140  ...............AT...............A........C...............................A................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      Q  F  S  L  R  L  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  Q  A  G  Y  V  W  G  R  
                    Query_8159   184  AGTTCTCCCTGAGGTTGACCTCTGTGAGCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCCAGGCCGGTTACGTTTGGGGGAGGT  273
V  93.4% (228/244)  IGHV4-34*01  230  ............A.C...G........C....................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  91.3% (21/23)    IGHD3-16*02  10   -------------------------------------------------------------------------...............T.  26

                                      ---------------------->                                  
                                      F  R  F  S  Y  V  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8159   274  TTCGTTTTTCCTACGTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  91.3% (21/23)    IGHD3-16*02  27   A.....---------------------------------------------------  32
J  95.7% (45/47)    IGHJ4*02     2    ----------....T.....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_333644

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD3-10*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGGAT	GGGAGTTA	CGAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATGGGAGTTACGAAACTTTGACTAC	ARGGWELRNFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_8160   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACAGCTTCACCAACTA  90
V  96.2% (278/289)  IGHV5-51*03  6    ....................C.............................................T..............T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  T  Y  S  P
                    Query_8160   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCACATACAGCCC  180
V  96.2% (278/289)  IGHV5-51*03  96   ............................................................................A...G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  M  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8160   181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACATGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (278/289)  IGHV5-51*03  186  ........A..........................A........G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  F  C  A  R  G  G  W  E  L  R  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8160   271  CATCTATTTCTGTGCGAGAGGGGGATGGGAGTTACGAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.2% (278/289)  IGHV5-51*03  276  ...G....A..........----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD3-10*01  17   --------------------------........-------------------------------------------------  24
J  100.0% (45/45)   IGHJ4*02     4    --------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_333645

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            375     3e-106
IGHD1-26*01                                                                                           12.2    35    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	265	25	0	91.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y
                    Query_8161   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACCACTTA  90
V  91.4% (265/290)  IGHV1-8*01   6    ..................G...............................................T........C..........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  T  N  P  K  T  G  N  T  G  F  A  Q
                    Query_8161   91   TGATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGACGAACCCTAAAACTGGAAACACAGGCTTTGCACA  180
V  91.4% (265/290)  IGHV1-8*01   96   .................................A..G..............A....T.........C.G...T..........A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D  T  A
                    Query_8161   181  GAGATTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGACACGGC  270
V  91.4% (265/290)  IGHV1-8*01   186  ..AG...C............................C.....A.................GC............G..C..AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_8161   271  CATATATTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  352
V  91.4% (265/290)  IGHV1-8*01   276  .G.G................--------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   -----------------------------...G.....--------------------------------------------  18
J  100.0% (40/40)   IGHJ5*02     11   ------------------------------------------........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_234504

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           327     9e-92
IGHD2-2*01                                                                                            23.8    0.011
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TATT	TAGTACCAGCTG	GAACGACC	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTATTTAGTACCAGCTGGAACGACCACGGTTTGGACGTC	ARVFSTSWNDHGLDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  T  D  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8162   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCCTTCACTGATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-48*03  47   ...................................A......G.AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  R  G  G  H  S  T  H  Y  A  T  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_8162   91   AGTGGGTTTCATACATTAGTCGCGGTGGTCATTCCACACACTACGCGACCTCTGTTAAGGGCCGATTCACCATCTCCAGAGACAGCGCCA  180
V  92.0% (229/249)  IGHV3-48*03  137  ....................A.TA.....AG.A...T.T.......AGA......G............................A.....  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  R  V  F  S  T  S  W  N  
                    Query_8162   181  AGAACTCACTCTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTCTTTATTACTGTGCGAGAGTATTTAGTACCAGCTGGAACG  270
V  92.0% (229/249)  IGHV3-48*03  227  ..........G.........................C.............G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD2-2*01   13   -------------------------------------------------------------------------............-----  24

                                      ---------------->                                 
                                      D  H  G  L  D  V  W  G  L  G  T  T  V  T  V  S  S 
                    Query_8162   271  ACCACGGTTTGGACGTCTGGGGCCTAGGAACCACGGTCACCGTCTCCTCA  320
J  93.6% (44/47)    IGHJ6*02     16   ---.....A...............A...G.....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_159590

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           403     1e-114
IGHD1-26*01                                                                                           10.3    132   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	REISRGATLTT	283	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	69	69	67	1	1	97.1
CDR1-IMGT	70	93	24	21	3	0	87.5
FR2-IMGT	94	144	51	50	1	0	98
CDR2-IMGT	145	168	24	21	3	0	87.5
FR3-IMGT	169	282	114	109	5	0	95.6
CDR3-IMGT (germline)	283	290	8	8	0	0	100
Total	N/A	N/A	290	276	13	1	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V   R  L  E  L  R  *  R  S  L  G  P  Q  *  G  S  P  A  R  L  L  V  T  P  L  P  P  L
                    Query_8163   2    CAGCTGGTGC-GTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  90
V  95.2% (276/290)  IGHV1-18*01  7    ..........A......................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                        L  S  A  G  C  D  R  P  L  D  K  G  L  S  G  W  E  G  S  T  L  T  M  V  T  Q  S  M  H  R
                    Query_8163   91   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTATGCACAG  180
V  95.2% (276/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                        G  S  R  A  E  S  P  *  P  Q  T  H  P  R  A  Q  P  T  W  S  *  G  A  *  D  L  T  T  R  P
                    Query_8163   181  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  270
V  95.2% (276/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                        Y  I  T  V  R  E  I  S  R  G  A  T  L  T  T  G  A  R  E  S  W  S  P  S  P  Q 
                    Query_8163   271  ATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  349
V  95.2% (276/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_241073

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           327     9e-92
IGHD1-1*01                                                                                            12.2    34   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCAGGAT	GTACAA	GTGCCAGGTGATCTGCGGATA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAGATCAGGATGTACAAGTGCCAGGTGATCTGCGGATATACTTCTACGGTTTGGACGTC	AADQDVQVPGDLRIYFYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	230	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  A  T  D  L  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_8164   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCGCCACTGATCTTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.6% (230/251)  IGHV4-61*01  49   .......................................AG..G..G.AG........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  L  Y  Y  N  G  V  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  R  D  S  S 
                    Query_8164   91   CTGGAGTGGATTGGATATCTCTATTACAATGGGGTCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAAGAGACTCGTCC  180
V  91.6% (230/251)  IGHV4-61*01  139  ..............G...A.........G....AG...........................................GT....A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  M  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  A  D  Q  D  V  Q  V  P 
                    Query_8164   181  AAGAACCAGTTCTCCCTGAAGATGAACTCTGTGACCGCTGCGGACTCGGCCGTATATTATTGTGCGGCAGATCAGGATGTACAAGTGCCA  270
V  91.6% (230/251)  IGHV4-61*01  229  .....................C...G...................A.......G.....C......AG...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-1*01   2    ------------------------------------------------------------------------------......------  7

                                      CDR3-IMGT-------------------------->                                 
                                       G  D  L  R  I  Y  F  Y  G  L  D  V  W  G  L  G  T  T  V  T  V  S  S 
                    Query_8164   271  GGTGATCTGCGGATATACTTCTACGGTTTGGACGTCTGGGGCCTAGGGACCACGGTCACCGTCTCCTCA  339
J  94.4% (51/54)    IGHJ6*02     9    ---------------....A.......A...............A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_114863

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           377     1e-106
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGGCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGGCGTCCGCCAGTGGCTGGCACTTTGACAAT	ARPASASGWHFDN	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	265	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_8165   1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCAGTTA  90
V  91.7% (265/289)  IGHV5-51*03  6    .........................G.............G.........................G.........C.GC..T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  D  I  R  Y  S  P
                    Query_8165   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGATATTAGATATAGTCC  180
V  91.7% (265/289)  IGHV5-51*03  96   C.......G..................................................AT...GG...........CC.....C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  G
                    Query_8165   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGG  270
V  91.7% (265/289)  IGHV5-51*03  186  .............................C..A.AA........G............................................C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  P  A  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8165   271  CATGTATTACTGTGCGAGACCGGCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  91.7% (265/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_119978

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            353     9e-100
IGHD3-16*01                                                                                           14.1    8.5   
IGHJ5*01                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGC	GTATAATGAT	AAGTCCCCGAATCATA	GGTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGCGTATAATGATAAGTCCCCGAATCATAGGTCCGACTCC	AREAYNDKSPNHRSDS	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  G  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_8166   1    ACCCTGTCCCTCACCTGCGCAGTCTCTGGTGCCTCCATCAGCGGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.6% (237/248)  IGHV4-4*02   49   ....................T..........G..........A...............................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  V  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  R 
                    Query_8166   91   GAGTGGATTGGGGAAATCTATCATGTTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAGG  180
V  95.6% (237/248)  IGHV4-4*02   139  ........................AG........................................................A.....A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  N  D  K  S  P 
                    Query_8166   181  AACCAGTTCTCCCTCAATCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGAGGCGTATAATGATAAGTCCCCG  270
V  95.6% (237/248)  IGHV4-4*02   229  ..............G..G....G...........................G.................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  90.0% (9/10)     IGHD3-16*01  1    -----------------------------------------------------------------------....T.....---------  10

                                      ----------------->                                  
                                       N  H  R  S  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8166   271  AATCATAGGTCCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  95.6% (43/45)    IGHJ5*01     7    -------...T...............A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_31671

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           366     2e-103
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTGG	TATGGTTCGGGGACTTAT	CCCCAT	TACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATTGGTATGGTTCGGGGACTTATCCCCATTACCACTACTACGGTATGGACGTC	AKDWYGSGTYPHYHYYGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  I  F  T  F  S  S  N  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8167   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTATATTCACCTTTAGCAGTAATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-23*01  47   .............................GG...............CT..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8167   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.8% (242/250)  IGHV3-23*01  137  .................................G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  D  W  Y  G  S  G  T  
                    Query_8167   181  AGAACACGCTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTTCTGTGCGAAAGATTGGTATGGTTCGGGGACTT  270
V  96.8% (242/250)  IGHV3-23*01  227  .................C..................................A....A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  94.4% (17/18)    IGHD3-10*01  8    --------------------------------------------------------------------------.............G..  23

                                      R3-IMGT------------------------>                                 
                                      Y  P  H  Y  H  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8167   271  ATCCCCATTACCACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  94.4% (17/18)    IGHD3-10*01  24   ..---------------------------------------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    --------...T.....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_51166

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCTT	TTCGGGGA	A	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCTTTTCGGGGAAAACTGGTTCGGCCCC	ARRLFGENWFGP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	243	117	103	11	3	88
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	224	22	3	90


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Q  I  W  W  S  W  V  R  Q  A  P  G  K  G  L 
                    Query_8168   1    ACCCTGTCCCTCACCTGCACTGTTTCTGGTGGCTCCATCAGCAGTCAGATCTGGTGGAGTTGGGTCCGCCAGGCCCCAGGGAAGGGGCTT  90
V  90.0% (224/249)  IGHV4-4*02   49   ..................G....C.....................AGT.A......................C................G  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><-----------------------------------------------------
                                       E  W  I  G  E  I  L  H  S  G  S  T  T  T  Y  I  P  S  L  E  S  R  V  T  I  S  I  D  K  S 
                    Query_8168   91   GAGTGGATTGGGGAAATCCTTCATAGCGGGAGCACCACCACTTACATCCCGTCCCTCGAGAGTCGAGTCACCATCTCAATCGACAAGTCC  180
V  90.0% (224/249)  IGHV4-4*02   139  ..................TA......T..........A.---....A..........A................A...G.A.........  225
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N     Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 

                                      FR3-IMGT------------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  R  L  F  G  E  N  W 
                    Query_8168   181  AAGAACCAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCGGACACGGCCATATATTATTGTGCGAGACGTCTTTTCGGGGAAAACTGG  270
V  90.0% (224/249)  IGHV4-4*02   226  ...................A......C........................G.G.....C.........---------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-10*01  13   ---------------------------------------------------------------------------........-------  20
J  95.9% (47/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  G  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8168   271  TTCGGCCCCTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  313
J  95.9% (47/49)    IGHJ5*02     9    ....A...........A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_31673

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-28*01                                                                                           367     6e-104
IGHD1-26*01                                                                                           14.1    8.3   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-28*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAA	TTGCATCGGTCGCGC	GTGGGAG	T	TACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGCATCGGTCGCGCGTGGGAGTTACGTTGACTAC	ARIASVARGSYVDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	112	2	0	98.2
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	241	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  N  N  W  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_8169   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCATCAGCAGTAATAACTGGTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGACTG  90
V  97.6% (241/247)  IGHV4-28*01  49   ..............................................G...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  S  N  W  W  G  W  I  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  S  I  S  Y  T  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 
                    Query_8169   91   GAGTGGATTGGGTCCATCTCTTATACTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAG  180
V  97.6% (241/247)  IGHV4-28*01  139  .............A.....A.....G................................................................  228
                                       E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  R  S  V  T  A  V  D  T  A  V  Y  F  C  A  R  I  A  S  V  A  R  G  S 
                    Query_8169   181  AACCAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGTGGACACGGCCGTGTATTTCTGTGCGAGAATTGCATCGGTCGCGCGTGGGAGT  270
V  97.6% (241/247)  IGHV4-28*01  229  .......................C...............................A...........-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  V  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD1-26*01  7    ----------------------------------------------------------------------------------.......-  13

                                      ----------->                                  
                                       Y  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8169   271  TACGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.8% (45/46)    IGHJ4*02     3    ...T..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_51164

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     2e-90
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCTCAG	AGTAGTACCAACTGTTATG	GGCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCAGAGTAGTACCAACTGTTATGGGCTTCTACTACTACGGTATGGACGTC	ARGLRVVPTVMGFYYYGMDV	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	240	117	109	5	3	93.2
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	229	16	3	92.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  G  G  S  F  S  T  Y  Y  W  T  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_8170   1    ACCCTGTCCCTCACCTGCACTGTCTATGGTGGGTCCTTCAGCACTTACTACTGGACCTGGATCCGCCAGACCCCAGGGAAGGGGCTGGAG  90
V  92.3% (229/248)  IGHV4-34*01  49   ..................G......................TGG...........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><-----------------------------------------------------FR3
                                       W  I  G  E  I  Y  V  G  G  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_8170   91   TGGATTGGGGAAATCTATGTTGGTGGAGGCACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAG  180
V  92.3% (229/248)  IGHV4-34*01  139  ...............A..CA.A.....A.....---...................................A..................  225
                                       W  I  G  E  I  N  H  S  G  S  T     N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                      -IMGT------------------------------------------------------><-------------------------CDR3
                                       N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  G  L  R  V  V  P  T  V 
                    Query_8170   181  AACCAGTTCTCCCTGAACCTGAGCTCTGTGACCGCCGCGGACACGGCTATGTACTACTGCGCGAGAGGCCTCAGAGTAGTACCAACTGTT  270
V  92.3% (229/248)  IGHV4-34*01  226  .................G..............................G....T.....T........----------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                      
D  89.5% (17/19)    IGHD2-2*01   11   --------------------------------------------------------------------------..........G...C.  26

                                      -IMGT------------------------>                                 
                                       M  G  F  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8170   271  ATGGGCTTCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
D  89.5% (17/19)    IGHD2-2*01   27   ...------------------------------------------------------------  29
J  100.0% (55/55)   IGHJ6*02     8    --------.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_31675

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           364     5e-103
IGHD3-16*01                                                                                           14.1    8.3   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGATTAGAG	ATGCTTA	CAATTATTTTC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGATTAGAGATGCTTACAATTATTTTCTTGGCTAC	ARVIRDAYNYFLGY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  K  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8171   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCAAGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGTTGG  90
V  96.8% (241/249)  IGHV3-33*01  47   ......................................................T...............................C...  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  Y  D  G  N  N  K  Y  Y  A  D  S  V  N  G  R  F  T  I  S  R  D  N  S  
                    Query_8171   91   AGTGGGTGGCACTTATATGGTATGATGGAAATAATAAATACTATGCAGACTCCGTGAACGGCCGATTCACTATCTCCAGAGACAATTCCA  180
V  96.8% (241/249)  IGHV3-33*01  137  ...........G..................G...........................G...........C...................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  N  T  L  Y  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  I  R  D  A  Y  N  
                    Query_8171   181  GGAACACGCTGTATCTGCAAATGAACAACCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGTGATTAGAGATGCTTACAATT  270
V  96.8% (241/249)  IGHV3-33*01  227  A..........................G.........................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-16*01  27   ------------------------------------------------------------------------------.......-----  33

                                      ------------->                                  
                                      Y  F  L  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8171   271  ATTTTCTTGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.6% (41/42)    IGHJ4*02     7    ------...A......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_51162

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           339     2e-95
IGHD1-1*01                                                                                            10.3    124  
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGGGAAACGTAGGGATGCC	TACAA	TCGTC	GATGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGAAACGTAGGGATGCCTACAATCGTCGATGTTTTTGATGTC	ARMGNVGMPTIVDVFDV	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8172   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  93.6% (233/249)  IGHV4-31*03  49   ...................C.....................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Q  I  Y  H  T  G  S  S  D  Y  S  P  S  L  K  S  R  L  T  I  A  V  D  T  S 
                    Query_8172   91   CTGGAGTGGATCGGGCAAATCTATCACACTGGGAGCAGCGACTACAGCCCGTCCCTCAAGAGTCGACTTACCATAGCTGTAGACACGTCT  180
V  93.6% (233/249)  IGHV4-31*03  139  ...........T...T.C......T...G........C.T......A...................G........T.A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  M  G  N  V  G  M  P 
                    Query_8172   181  AAGAACCAGTTCTCCCTGAACCTGAGTTCTGTGACGGCCGCGGACACGGCCGTGTATTACTGTGCGAGAATGGGAAACGTAGGGATGCCT  270
V  93.6% (233/249)  IGHV4-31*03  229  ....................G.....C........T.................................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD1-1*01   3    -----------------------------------------------------------------------------------------.  3

                                      MGT-------------------->                                  
                                       T  I  V  D  V  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8172   271  ACAATCGTCGATGTTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  328
D  100.0% (5/5)     IGHD1-1*01   4    ....------------------------------------------------------  7
J  98.0% (48/49)    IGHJ3*01     2    ---------....C............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_51161

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCAC	GTATCACTATGACAATGGTGGTTATT	GGACCGCGGGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCACGTATCACTATGACAATGGTGGTTATTGGACCGCGGGGGCTTTTGATATC	ARTTYHYDNGGYWTAGAFDI	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8173   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCTTGAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (232/243)  IGHV4-59*01  49   ....................................A.C...................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  F  G  F  I  Y  Y  S  G  S  T  T  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_8173   91   TGGTTTGGTTTTATCTATTACAGTGGGAGCACCACCTACAACCCTTCCCTCAGGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAAG  180
V  95.5% (232/243)  IGHV4-59*01  139  ...A....G.A.......................A.........C.......A.....................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  T  Y  H  Y  D  N  G  G 
                    Query_8173   181  CAGTTCTCCCTGAAGCTGAGATCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAACCACGTATCACTATGACAATGGTGGT  270
V  95.5% (232/243)  IGHV4-59*01  229  ....................C..........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (22/26)    IGHD3-22*01  1    --------------------------------------------------------------------....T.......T.G.A.....  22

                                      GT------------------------>                                  
                                       Y  W  T  A  G  A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_8173   271  TATTGGACCGCGGGGGCTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  331
D  84.6% (22/26)    IGHD3-22*01  23   ....---------------------------------------------------------  26
J  97.8% (45/46)    IGHJ3*02     5    ---------------...........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_51160

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           335     4e-94
IGHD3-16*02                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTATCG	ACATTGGTTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTATTTGACTAT	ARHYRHWLFDY	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  V  S  L  T  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_8174   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGTCTCCCTCACCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  92.8% (232/250)  IGHV4-39*01  50   .....TCC...A....C.............G....A...G..................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_8174   94   TGGAGTGGATTGGGAGTTTGTATTATAGTGGCAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCCA  183
V  92.8% (232/250)  IGHV4-39*01  140  .................A.C...........G...............................................A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  H  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  H  W  L  F  
                    Query_8174   184  AGAACCACTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACATTATCGACATTGGTTATTTG  273
V  92.8% (232/250)  IGHV4-39*01  230  .......G..C........G....G...T.......................G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*02  25   ----------------------------------------------------------------------......--------------  30
J  97.7% (42/43)    IGHJ4*02     6    --------------------------------------------------------------------------------------....  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8174   274  ACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.7% (42/43)    IGHJ4*02     10   ....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_31679

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           276     3e-76
IGHD6-19*01                                                                                           18.0    0.59 
IGHJ1*01                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GTCCTCGGC	GGGGATTGCACTGGCTGG	AACATTTGGGGT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCTCGGCGGGGATTGCACTGGCTGGAACATTTGGGGTC	ARGSSAGIALAGTFGV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	18	8	0	69.2
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	97	17	0	85.1
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	210	34	0	86.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  G  V  R  G  G  S  F  S  G  S  Y  W  A  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_8175   4    CCCTGAGACTCTCCTGTGGTGTCCGTGGTGGGTCCTTCAGTGGCTCTTACTGGGCCTGGATCCGCCAGCCCCCAGGCAAGGGGCTGGAGT  93
V  86.1% (210/244)  IGHV4-34*01  50   .....TCC...A....C.C....TA..................T.AC......AG.....................G.............  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  S  P  Q  Y  N  P  S  L  K  S  R  V  S  I  A  V  D  T  S  N  N  
                    Query_8175   94   GGATTGGCGAAATCAATCATAGTGGAAGTCCCCAATACAACCCGTCCCTCAAGAGTCGGGTTAGTATCGCAGTGGACACGTCGAACAACC  183
V  86.1% (210/244)  IGHV4-34*01  140  .......G....................CA..A.C.......................A..C.CC..AT....A........C..G....  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      H  L  S  L  R  M  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  S  A  G  I  A  L  A  
                    Query_8175   184  ACCTCTCCCTGAGGATGACCTCTGTTACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGTCCTCGGCGGGGATTGCACTGGCTG  273
V  86.1% (210/244)  IGHV4-34*01  230  .GT.........A.C...G......G......................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  83.3% (15/18)    IGHD6-19*01  1    -------------------------------------------------------------------------...T..A...G......  17

                                      ------------->                                  
                                      G  T  F  G  V  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_8175   274  GAACATTTGGGGTCTGGGGCCAGGGCACCCTAGTCACCGTCTCCGCAG  321
D  83.3% (15/18)    IGHD6-19*01  18   .-----------------------------------------------  18
J  94.3% (33/35)    IGHJ1*01     18   -------------..................G............T...  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_31678

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           405     4e-115
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGCGGC	GCTACTAC	ACTCCCCCCCACAAAAGG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGCGGCGCTACTACACTCCCCCCCACAAAAGGCGGTATGGACGTC	ARLRGATTLPPTKGGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  R  F  T  N  Y
                    Query_8176   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGGTTCACCAATTA  90
V  94.8% (274/289)  IGHV5-51*03  6    .................................................................G............C..T....GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  F  Y  S  P
                    Query_8176   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCAGATACCTTTTACAGTCC  180
V  94.8% (274/289)  IGHV5-51*03  96   ........................................................................T......AGA.....C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  R  V  T  M  S  V  D  R  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  A
                    Query_8176   181  GTCCTTCCAAGGCCGGGTCACCATGTCAGTCGACAGGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACCCCGC  270
V  94.8% (274/289)  IGHV5-51*03  186  ..............A.........C....C.....A.................................................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  L  R  G  A  T  T  L  P  P  T  K  G  G  M  D  V  W  G  Q  G  T  P  V  S
                    Query_8176   271  CATGTATTACTGTGCGAGACTTCGCGGCGCTACTACACTCCCCCCCACAAAAGGCGGTATGGACGTCTGGGGCCAAGGGACCCCGGTCTC  360
V  94.8% (274/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD1-26*01  13   ----------------------------........------------------------------------------------------  20
J  95.7% (44/46)    IGHJ6*02     17   ------------------------------------------------------............................A.....A.  52

                                                
                                        V  S  S 
                    Query_8176   361  CGTCTCCTCA  370
J  95.7% (44/46)    IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_286277

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCTACGAGGCGGGTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATATCTACGAGGCGGGTCATCAATATAGTGGCTACATGATTAATGACTAT	GKDIYEAGHQYSGYMINDY	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	23	1	0	95.8
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	125	24	22	2	0	91.7
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	232	219	13	0	94.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  D  W  V  S  G  I  
                    Query_8177   16   GTGCAGCCTCTGGATTCACCTTTAGCAGATATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGATTGGGTCTCAGGCATTA  105
V  94.4% (219/232)  IGHV3-23*01  65   ............................C............................................G..........CT....  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  E  S  G  G  S  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  
                    Query_8177   106  GTGAAAGTGGTGGTAGCACAAACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCAAGAACACCCTGTATCTAC  195
V  94.4% (219/232)  IGHV3-23*01  155  ...GT...............T...............................................T..........G........G.  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------------CDR3-IMGT-------------
                                      Q  M  I  S  L  R  A  E  D  T  A  V  Y  Y  C  G  K  D  I  Y  E  A  G  H  Q  Y  S  G  Y  M  
                    Query_8177   196  AAATGATCAGCCTCAGAGCCGAGGACACGGCCGTATATTACTGTGGGAAAGATATCTACGAGGCGGGTCATCAATATAGTGGCTACATGA  285
V  94.4% (219/232)  IGHV3-23*01  245  ......A......G...............................C......--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (13/13)   IGHD5-12*01  5    -------------------------------------------------------------------------.............----  17

                                      ---------->                                  
                                      I  N  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_8177   286  TTAATGACTATTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  330
J  95.1% (39/41)    IGHJ4*02     8    ----......C......................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_286270

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           439     2e-125
IGHD3-16*01                                                                                           12.2    36    
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTTGAGG	GATTAC	CAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTAC	ARSLRDYQPFYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	285	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_8178   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  98.6% (285/289)  IGHV5-51*03  6    .............................................................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_8178   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.6% (285/289)  IGHV5-51*03  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8178   181  GTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACTGC  270
V  98.6% (285/289)  IGHV5-51*03  186  ......................A................................................................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  S  L  R  D  Y  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_8178   271  CATGTATTACTGTGCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  359
V  98.6% (285/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  8    ----------------------------......-------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ------------------------------------------....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_286271

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            394     7e-112
IGHD1-1*01                                                                                            14.1    9.5   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	T	GAACGAC	TCGGACCGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGAACGACTCGGACCGTACTACTTTGACTAC	ARDERLGPYYFDY	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	10	78	69	68	1	0	98.6
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	105	9	0	92.1
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                     <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                      Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y 
                    Query_8179  10   CAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTACCTAT  99
V  93.4% (271/290)  IGHV1-3*01  7    .....T...............................................................................G....  96
                                      Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                     --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                      G  I  H  W  L  R  Q  A  P  G  Q  R  L  E  L  V  G  W  I  S  T  G  N  G  N  T  L  Y  S  Q 
                    Query_8179  100  GGCATACATTGGTTGCGCCAGGCCCCCGGACAAAGGCTTGAGTTGGTGGGATGGATCAGCACTGGCAATGGTAACACACTGTATTCACAG  189
V  93.4% (271/290)  IGHV1-3*01  97   .CT..G......G..............................G.A............A.G.................AAA.........  186
                                      A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                     -----------------------------------------FR3-IMGT-----------------------------------------
                                      N  F  Q  G  R  A  T  I  T  R  D  T  S  A  T  T  A  Y  M  D  L  S  S  L  R  S  E  D  T  A 
                    Query_8179  190  AATTTCCAGGGTAGAGCCACCATTACCAGGGACACATCCGCGACCACAGCCTACATGGACCTGAGCAGCCTGAGATCTGAAGACACGGCT  279
V  93.4% (271/290)  IGHV1-3*01  187  ..G........C....T..........................G...............G..............................  276
                                      K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                     -----------><--------------CDR3-IMGT-------------->                                  
                                      V  Y  F  C  A  R  D  E  R  L  G  P  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8179  280  GTGTATTTCTGTGCGAGAGATGAACGACTCGGACCGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  364
V  93.4% (271/290)  IGHV1-3*01  277  .......A............-----------------------------------------------------------------  296
                                      V  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD1-1*01  11   ---------------------.......---------------------------------------------------------  17
J  100.0% (48/48)   IGHJ4*02    1    -------------------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_51169

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_8180   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_8180   91   GAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ...................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_8180   181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  95.7% (44/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8180   271  GACGTCTGGGGCCAAGGGACCACGGTTACCGTCTCCTCA  309
J  95.7% (44/46)    IGHJ6*02     24   ..........................C............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_51168

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           343     2e-96
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	CAGCTA	TACAATTTTTGGAGTGG	ACACATAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACAGCTATACAATTTTTGGAGTGGACACATATTACTTTGACTGG	ANSYTIFGVDTYYFDW	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8181   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGCACCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (233/247)  IGHV3-23*01  47   ....................................C........G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  T  G  I  S  G  S  G  E  N  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_8181   91   AGTGGGTCACAGGTATCAGTGGTAGTGGTGAAAACACATACTACGCAGACTCCGTGAAGGGCCGTTTCACCGTCTCCAGAGACAACTCCA  180
V  94.3% (233/247)  IGHV3-23*01  137  ........T...C...T.............GT.G..............................G......A.............T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  N  S  Y  T  I  F  G  V  
                    Query_8181   181  AGAACACGCTGTATCTGCAAATGAACAGCCTAAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAACAGCTATACAATTTTTGGAGTGG  270
V  94.3% (233/247)  IGHV3-23*01  227  ...............................G.........................A.........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.1% (16/17)    IGHD3-3*01   5    -------------------------------------------------------------------------...G.............  21

                                      T------------------>                                  
                                      D  T  Y  Y  F  D  W  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_8181   271  ACACATATTACTTTGACTGGTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  324
J  93.5% (43/46)    IGHJ4*02     3    --------..........AC..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_214031

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            324     8e-91
IGHD1-26*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	GCTGGGC	GGGAGCT	GGACCCCAGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAAAGATGCTGGGCGGGAGCTGGACCCCAGTTACTTAAACTAC	AKDAGRELDPSYLNY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	251	9	8	1	0	88.9
Total	N/A	N/A	251	229	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_8182   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAGGGGCCTGG  90
V  91.2% (229/251)  IGHV3-9*01   47   ....................................CC...........................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  G  W  N  G  D  S  I  G  Y  A  G  A  V  Y  G  R  F  T  I  S  R  D  N  A  
                    Query_8182   91   AGTGGGTCTCAGGTATTGGTTGGAATGGGGATAGCATCGGCTACGCGGGCGCTGTGTATGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.2% (229/251)  IGHV3-9*01   137  .................A........A.T.G......A.....T....A.T.....A.G...............................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  K  S  V  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  A  G  R  E  L  D  
                    Query_8182   181  AGAAGTCCGTCTACCTGCAAATGAACAGTCTGAGACCTGAGGACACGGCCGTTTATTATTGTGCTAAAGATGCTGGGCGGGAGCTGGACC  270
V  91.2% (229/251)  IGHV3-9*01   227  ....C...C.G..T.....................G..............T.G.....C.....A......-------------------  297
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (7/7)     IGHD1-26*01  9    ------------------------------------------------------------------------------.......-----  15

                                      ---------------->                                  
                                      P  S  Y  L  N  Y  W  G  Q  G  T  V  V  I  V  S  S  
                    Query_8182   271  CCAGTTACTTAAACTACTGGGGCCAGGGAACCGTGGTCATCGTCTCCTCAG  321
J  91.3% (42/46)    IGHJ4*02     3    -----.....TG....................C......C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_214030

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           338     4e-95
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GATAAACAG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGAAGAGAGATAAACAGTGCTTTCGATATC	GREINSAFDI	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_8183   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTTAGTAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-74*01  47   ............................T...........C........CTGG...CA............A...................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  T  D  G  S  S  T  T  Y  A  D  F  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8183   91   TGTGGGTCTCACGTATTAATACTGATGGGAGTAGCACAACCTACGCGGACTTCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.2% (233/250)  IGHV3-74*01  137  .....................G.................G...........C......................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  D  T  M  R  A  E  D  T  A  V  Y  Y  C  G  R  E  I  N  S  A  F  D  
                    Query_8183   181  AGAACACGCTGTATCTGCAAATGGACACCATGAGAGCCGAGGACACGGCTGTGTATTACTGTGGAAGAGAGATAAACAGTGCTTTCGATA  270
V  93.2% (233/250)  IGHV3-74*01  227  .......................A...GTC.................................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  95.7% (45/47)    IGHJ3*02     4    -------------------------------------------------------------------------------......T....  14

                                      ->                                  
                                      I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8183   271  TCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  306
J  95.7% (45/47)    IGHJ3*02     15   .................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_214033

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATGATC	GTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATCGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDRGSYLYYFYGMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	280	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_8184   2    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCA  91
V  94.9% (280/295)  IGHV5-51*01  2    ....G........G.......................................................G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  I  M  Y  P  D  D  S  D  I  R  Y  
                    Query_8184   92   GTTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATCGGGATCATGTATCCTGATGACTCTGATATCAGATACA  181
V  94.9% (280/295)  IGHV5-51*01  92   .C..........G.......................................G........C.......G...........C........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  G  T  A  Y  L  Q  W  R  S  L  K  A  S  D  
                    Query_8184   182  GCCCGTCTTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCGGCACCGCCTACCTGCAGTGGAGGAGCCTGAAGGCCTCGGACA  271
V  94.9% (280/295)  IGHV5-51*01  182  .......C...C...................................A......................C...................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  F  C  A  R  H  G  D  D  R  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  P  G  T  
                    Query_8184   272  CCGCCATATATTTCTGTGCGAGACATGGGGATGATCGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCCGGGGACCA  361
V  94.9% (280/295)  IGHV5-51*01  272  .......G....A............-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  90.9% (10/11)    IGHD1-26*01  7    ------------------------------------.......C...-------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------------.......A.......................AA.......  45

                                                       
                                      T  V  T  V  S  S 
                    Query_8184   362  CGGTCACCGTCTCCTCA  378
J  94.7% (54/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_214035

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           349     2e-98
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCGGACGAATA	ACTATGGTTCGGGGAG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCGGACGAATAACTATGGTTCGGGGAGCCCCTTTGACGAC	ARHRTNNYGSGSPFDD	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  S  T  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_8185   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCGGTAGTACTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.4% (237/251)  IGHV4-39*01  49   ..........................................A......G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  I  H  Y  N  P  S  L  Q  S  R  V  T  I  F  V  D  T  S 
                    Query_8185   91   CTGGAGTGGATCGGCAGTATCTATTATAGTGGGAGCATACACTACAATCCGTCCCTCCAGAGTCGAGTCACCATATTCGTGGACACGTCC  180
V  94.4% (237/251)  IGHV4-39*01  139  ...........T..G......................CCT.......C.........A..................C...A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  T  D  T  A  V  Y  Y  C  A  R  H  R  T  N  N  Y  G 
                    Query_8185   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCACAGACACGGCTGTGTATTACTGTGCGAGACATCGGACGAATAACTATGGT  270
V  94.4% (237/251)  IGHV4-39*01  229  ...................A...................G...............................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (16/16)   IGHD3-10*01  6    ----------------------------------------------------------------------------------........  13

                                      GT------------------>                                  
                                       S  G  S  P  F  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8185   271  TCGGGGAGCCCCTTTGACGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  100.0% (16/16)   IGHD3-10*01  14   ........-----------------------------------------------  21
J  97.7% (43/44)    IGHJ4*02     5    -----------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_214034

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           333     1e-93
IGHD3-3*01                                                                                            14.1    8.5  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	CTG	TTTTTGG	CGCAGCGAATGATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCTGTTTTTGGCGCAGCGAATGATAATTACGGTGTGGACGTC	ARAVFGAANDNYGVDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8186   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGGTATTGGATACACTGGGTCCGTCAAGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-74*01  47   ..............................................C..C.....G...........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  P  H  I  N  M  D  G  S  S  T  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8186   91   ATTGGGTCCCACATATTAACATGGATGGGAGTAGCACAGCCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.8% (231/249)  IGHV3-74*01  137  TG......T...G......T.GT...............AG..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  V  F  G  A  A  N  
                    Query_8186   181  AGAATACCCTGTATCTACAATTGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGAGCTGTTTTTGGCGCAGCGAATG  270
V  92.8% (231/249)  IGHV3-74*01  227  ....C..G........G...A...............................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-3*01   10   ------------------------------------------------------------------------.......-----------  16

                                      T------------------>                                 
                                      D  N  Y  G  V  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8186   271  ATAATTACGGTGTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  97.9% (47/48)    IGHJ6*02     15   -----......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_214036

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           363     1e-102
IGHD3-16*01                                                                                           12.2    31    
IGHJ2*01                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TGCTTA	CAATACTA	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTGCTTACAATACTAGGTACTTCGATCTC	ARAAYNTRYFDL	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8187   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGTCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (239/246)  IGHV3-53*01  47   ........................................................AG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_8187   91   AGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCCTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  97.2% (239/246)  IGHV3-53*01  137  ..................................................G.......................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  T  V  F  L  H  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  A  Y  N  T  R  Y  F  
                    Query_8187   181  ACACGGTGTTTCTTCACATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAGAGCTGCTTACAATACTAGGTACTTCG  270
V  97.2% (239/246)  IGHV3-53*01  227  .....C...A......A................................G................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (6/6)     IGHD3-16*01  28   -------------------------------------------------------------------......-----------------  33
J  100.0% (48/48)   IGHJ2*01     6    ---------------------------------------------------------------------------------.........  14

                                      ---->                                  
                                      D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8187   271  ATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  309
J  100.0% (48/48)   IGHJ2*01     15   .......................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_214039

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           308     4e-86
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	246	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	102	12	0	89.5
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	223	26	0	89.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_8188   4    CCCTGAGACTCTCCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  89.6% (223/249)  IGHV4-61*08  50   .....TCC...A........G.........G.......AG..G..G.....A......................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S  
                    Query_8188   94   TAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCCA  183
V  89.6% (223/249)  IGHV4-61*08  140  .G..................T..T................C.................G.......TC.........G.A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N  
                    Query_8188   184  GGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAACT  273
V  89.6% (223/249)  IGHV4-61*08  230  A.................A.....GC..........................G.....C..........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  86.4% (19/22)    IGHD2-15*01  7    -------------------------------------------------------------------------.....G..G.....G..  23

                                      -IMGT----------------------->                                  
                                      C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8188   274  GCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  86.4% (19/22)    IGHD2-15*01  24   .....----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    --------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_214038

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	273	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_8189   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  94.8% (273/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_8189   91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  94.8% (273/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_8189   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (273/288)  IGHV5-51*01  186  ...............G.........................T.........................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  G  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8189   271  CATATACTACGGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  94.8% (273/288)  IGHV5-51*01  276  ...G..T...T.......----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_159597

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           357     1e-100
IGHD5-18*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CC	TGGATACAGTTATGG	CA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGGATACAGTTATGGCAAC	ARPGYSYGN	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8190   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTCTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-48*03  47   .....................................CT...................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  D  H  R  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_8190   91   AGTGGGTTTCATACATTAGTAGTAGTGGTGATCACAGATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAGCGCCA  180
V  96.0% (238/248)  IGHV3-48*03  137  .............................AG.AC..T...............................................A.....  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      N  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  P  G  Y  S  Y  G  N  
                    Query_8190   181  ACAACTCACTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGACCTGGATACAGTTATGGCAACT  270
V  96.0% (238/248)  IGHV3-48*03  227  .G..................................C...............................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD5-18*01  2    ----------------------------------------------------------------------.........C.....-----  16
J  100.0% (36/36)   IGHJ4*02     13   ---------------------------------------------------------------------------------------...  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8190   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (36/36)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_305977

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            394     7e-112
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_8191  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.4% (271/290)  IGHV1-8*02  6    ..................G..........................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_8191  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.4% (271/290)  IGHV1-8*02  96   ........A.........................................................C.......................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_8191  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.4% (271/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8191  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.4% (271/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_305976

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           372     2e-105
IGHD1-26*01                                                                                           14.1    8.4   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCATACGCC	GTGGGAG	GAAGGGATACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATACGCCGTGGGAGGAAGGGATACCCCTTGACTAC	AKDHTPWEEGIPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_8192   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.6% (244/250)  IGHV3-23*01  47   ..........................................G..............G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  A  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  F  
                    Query_8192   91   AGTGGGTCTCAGCTATTAGTGGTAGTGCTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTTCA  180
V  97.6% (244/250)  IGHV3-23*01  137  ...........................G...........................................................C..  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  H  T  P  W  E  E  
                    Query_8192   181  AGAACACGCTGTATCTGCAAATGAACACCCTGAGAGCCGAGGACACGGCCTTATATTACTGTGCGAAAGATCATACGCCGTGGGAGGAAG  270
V  97.6% (244/250)  IGHV3-23*01  227  ...........................G......................G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD1-26*01  7    -------------------------------------------------------------------------------.......----  13

                                      ---------------->                                  
                                      G  I  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8192   271  GGATACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_305971

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           305     3e-85
IGHD3-10*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	CTATGTT	AAGGGGCTCTGATAG	TTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTATGTTAAGGGGCTCTGATAGTTTTAATACT	ATMLRGSDSFNT	250	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	63	36	27	3	6	75
FR2-IMGT	64	114	51	49	2	0	96.1
CDR2-IMGT	115	135	21	18	3	0	85.7
FR3-IMGT	136	249	114	102	12	0	89.5
CDR3-IMGT (germline)	250	253	4	4	0	0	100
Total	N/A	N/A	253	226	21	6	89.3


Alignments

                                      <--------FR1-IMGT---------><-------------CDR1-IMGT------------><--------------------FR2-IM
                                       T  L  S  L  T  C  N  V  S  G  G  S  I  I  I  S  T  N  G  Y  Y  W  G  W  I  R  Q  P  P  G 
                    Query_8193   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCATCATCATCAGTACAAATGGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGG  90
V  89.3% (226/253)  IGHV4-39*01  49   ...................C....................G..GT....------...................................  132
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S        S  Y  Y  W  G  W  I  R  Q  P  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  G  L  E  W  I  G  T  I  S  H  S  G  T  T  Y  Y  K  A  S  L  K  S  R  V  T  I  S  V  D 
                    Query_8193   91   AAGGGACTGGAGTGGATTGGGACTATCTCTCATAGTGGGACCACCTACTACAAGGCGTCCCTCAAGAGTCGAGTCACCATATCCGTCGAC  180
V  89.3% (226/253)  IGHV4-39*01  133  .....G................G.....A.T.........G............CC...............................A...  222
                                       K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-------------CDR3-IM
                                       T  S  K  N  Q  F  S  L  R  V  T  S  V  T  A  A  D  T  A  M  F  Y  C  A  T  M  L  R  G  S 
                    Query_8193   181  ACGTCGAAAAATCAGTTCTCCCTGAGGGTGACCTCTGTGACCGCCGCAGACACGGCTATGTTTTATTGTGCGACTATGTTAAGGGGCTCT  270
V  89.3% (226/253)  IGHV4-39*01  223  .....C..G..C.............A.C...G.........................G...A...C.......-----------------  295
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                   
D  100.0% (7/7)     IGHD3-10*02  7    -------------------------------------------------------------------------.......----------  13

                                      GT------------>                                  
                                       D  S  F  N  T  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8193   271  GATAGTTTTAATACTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  319
J  93.2% (41/44)    IGHJ3*02     7    -----....G...TC..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_305970

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           341     5e-96
IGHD2-8*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGCGGGGGGTTTATCATGA	TAATGGTG	GCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGCGGGGGGTTTATCATGATAATGGTGGCCTTGACTTC	ARRRGVYHDNGGLDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  Y  Y  W  N  W  I  R  Q  T  P  G  K  G  P  E 
                    Query_8194   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTACTACTGGAACTGGATCCGACAGACCCCAGGGAAGGGACCTGAG  90
V  94.7% (231/244)  IGHV4-59*08  49   .......................................A...............G.........G...C...............TG...  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  R  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8194   91   TGGATTGGGTATATCTATTCCAGGGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAAC  180
V  94.7% (231/244)  IGHV4-59*08  139  ...................A...T..................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  N  L  L  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  R  G  V  Y  H  D  N  G 
                    Query_8194   181  CAGTTCTCCCTGAACCTGCTCTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGAGACGGCGGGGGGTTTATCATGATAATGGT  270
V  94.7% (231/244)  IGHV4-59*08  229  ..............G...AG.................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD2-8*01   13   -----------------------------------------------------------------------------------.......  19

                                      ----------->                                  
                                       G  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8194   271  GGCCTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTTTCCTCAG  316
D  100.0% (8/8)     IGHD2-8*01   20   .---------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    ----......A...........................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_305973

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGTACCA	N/A	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGTACCAACTGCTACTACCAAATGGACGTC	ARVDCSSTNCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_8195   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.0% (222/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_8195   91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.0% (222/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  N  C  Y 
                    Query_8195   181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTATTGTGCGAGAGTGGACTGTAGTAGTACCAACTGCTAC  270
V  91.0% (222/244)  IGHV4-59*01  229  C..............................CT..............G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD2-2*01   8    ---------------------------------------------------------------------.............--------  20
J  89.3% (50/56)    IGHJ6*02     7    ----------------------------------------------------------------------------------...A....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  T  V  I  V  S  S 
                    Query_8195   271  TACCAAATGGACGTCTGGGGCCTAGGGACCACGGTCATCGTCTCCTCA  318
J  89.3% (50/56)    IGHJ6*02     15   ...GGT................A..............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_305979

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           336     1e-94
IGHD3-10*01                                                                                           10.3    117  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCAA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCAATCGGGCTATGATGCTTTTGATCTC	ARVQSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_8196   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-21*01  47   ............................................AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  E  Y  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  G  N  A  
                    Query_8196   91   AGTGGGTCTCATCCATTAGTAGTACTAGTGAATACATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGGCAACGCCA  180
V  93.2% (232/249)  IGHV3-21*01  137  ........................G....AGT........C...G..........................A.......A.A........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  Q  S  G  Y  D  A  
                    Query_8196   181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAGTCCAATCGGGCTATGATGCTT  270
V  93.2% (232/249)  IGHV3-21*01  227  ............A......A..............................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8196   271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_289538

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         349     2e-98
IGHD5-12*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGAGGAT	TGGCTACGA	GACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGACCCCCTTTGACCTC	ARAGRIGYETPFDL	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_8197     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTACTCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  95.1% (235/247)  IGHV4-38-2*02  49   ................................................T.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K 
                    Query_8197     91   GAGTGGATTGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAG  180
V  95.1% (235/247)  IGHV4-38-2*02  139  ......................A.........C.........A..............A........................C.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  Q  F  S  L  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  T 
                    Query_8197     181  AACCAGTTCTCGTTGAATCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGAGCGGGGAGGATTGGCTACGAGACC  270
V  95.1% (235/247)  IGHV4-38-2*02  229  ...........CC....G....G...........C...............G................-----------------------  295
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD5-12*01    11   -----------------------------------------------------------------------------.........----  19

                                        ----------->                                  
                                         P  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8197     271  CCCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.5% (42/44)    IGHJ4*02       5    --.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_289539

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           338     5e-95
IGHD2-2*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTATCGACTGTACCAT	TACCACCTGC	CGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTATCGACTGTACCATTACCACCTGCCGTTTTGACTTC	ASLIDCTITTCRFDF	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  Y  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  Y  P  G  K  G 
                    Query_8198   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTACATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGTACCCAGGGAAGGGC  90
V  93.5% (232/248)  IGHV4-39*01  49   ...................C..............C..........A..A...........G..............CC............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  V  G  S  I  N  Y  S  G  T  T  Y  Y  T  A  S  L  K  R  R  V  T  M  S  V  D  T  S 
                    Query_8198   91   CTGGAGTGGGTTGGGAGTATCAATTATAGTGGGACCACCTACTACACCGCGTCCCTCAAGAGGCGAGTCACCATGTCCGTAGACACGTCC  180
V  93.5% (232/248)  IGHV4-39*01  139  .........A...........T............G...........A.C.............T...........A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  I  D  C  T  I  T 
                    Query_8198   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGCCTTATCGACTGTACCATTACC  270
V  93.5% (232/248)  IGHV4-39*01  229  ...........................................................C........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.0% (9/10)     IGHD2-2*01   16   --------------------------------------------------------------------------------------....  19

                                      ----------------->                                  
                                       T  C  R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8198   271  ACCTGCCGTTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  90.0% (9/10)     IGHD2-2*01   20   .G....----------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_289532

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           339     2e-95
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTATCGTTCGGGGACTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATCGTTCGGGGACTTATTTTGACTAC	ARGLYYYRSGTYFDY	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  S  T  V  S  G  G  P  I  S  S  G  G  H  Y  W  N  W  I  R  Q  H  P  G  K  G  
                    Query_8199   4    CCCTGAGACTCTCCTCTACTGTCTCTGGTGGCCCCATCAGCAGTGGTGGTCACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  93.6% (233/249)  IGHV4-31*02  50   .....TCC...A...G................T.................T.........G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  T  R  I  T  I  S  V  D  T  S  
                    Query_8199   94   TGGAGTGGATTGGGCACATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGACTCGAATTACCATATCAGTAGACACCTCCA  183
V  93.6% (233/249)  IGHV4-31*02  140  ..............T..........C..................................G....G...................G..T.  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  R  S  
                    Query_8199   184  AGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCTATTACTATCGTTCGG  273
V  93.6% (233/249)  IGHV4-31*02  230  .........................C..........................G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (22/24)    IGHD3-10*01  2    --------------------------------------------------------------------------.........G......  17

                                      ---------------->                                  
                                      G  T  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8199   274  GGACTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  91.7% (22/24)    IGHD3-10*01  18   ...G....-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    --------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_289533

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            310     1e-86
IGHD2-21*01                                                                                           12.2    31   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	TGGTGA	AGTATTCCTTGGATC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGGTGAAGTATTCCTTGGATCACTTTGACCAC	ARLVKYSLDHFDH	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  N  D  H  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_8200   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATTACCAATGATCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.2% (222/246)  IGHV4-4*02   49   ..................GC...........G......C.G..G.AG.A.........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  R  S  G  S  T  T  Y  N  P  S  L  Q  S  R  V  A  F  S  V  D  K  S  K 
                    Query_8200   91   GAGTGGATTGGAGAAATCTATCGTAGTGGGAGCACCACTTACAACCCGTCCCTTCAGAGTCGAGTCGCCTTCTCAGTAGACAAGTCCAAG  180
V  90.2% (222/246)  IGHV4-4*02   139  ...........G..........A..............AC..............CA...........A..A.A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  F  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  V  K  Y  S  L  D  H 
                    Query_8200   181  AACCAGTTCTCCCTGAGTCTGAGATCTGTGACCGCCGCCGATACGGCCGTATATTACTGTGCGAGATTGGTGAAGTATTCCTTGGATCAC  270
V  90.2% (222/246)  IGHV4-4*02   229  ................AG.....C..............G..C........G...............------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-21*01  13   -------------------------------------------------------------------......-----------------  18
J  95.6% (43/45)    IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                                  
                                       F  D  H  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_8200   271  TTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  313
J  95.6% (43/45)    IGHJ4*02     6    ......T................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_289530

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           311     4e-87
IGHD2-21*02                                                                                           23.8    0.010
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGGAACTGGA	GGTGGTGACTGC	CTT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGGAACTGGAGGTGGTGACTGCCTTGACCTC	ARAGTGGGDCLDL	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	224	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  G  F  G  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_8201   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGCTTCAGTGGCTTTGGCATGCATTGGGTCCGCCAGGCTCCAGGCAGGGGCCTGG  90
V  90.0% (224/249)  IGHV3-33*01  47   ....................................C.......A...A.........C......................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  R  F  D  G  S  N  T  N  Y  A  A  F  A  K  S  R  F  I  I  S  R  D  N  S  
                    Query_8201   91   AGTGGGTGGCACTTATACGGTTTGATGGGAGTAATACAAATTATGCAGCCTTCGCGAAGAGTCGATTCATCATCTCCAGAGACAATTCCA  180
V  90.0% (224/249)  IGHV3-33*01  137  ...........G.....T...A......A.......A.T.C.......A..C..T....G.C.......C....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  M  D  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  A  G  T  G  G  G  D  
                    Query_8201   181  AGAACACGATGGATCTGCAGATGAACAGTCTGAGAGTCGAGGATACGGCTGTGTATTACTGTGCGAGAGCCGGAACTGGAGGTGGTGACT  270
V  90.0% (224/249)  IGHV3-33*01  227  ........C..T.......A........C.......C......C.........................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD2-21*02  11   --------------------------------------------------------------------------------..........  20

                                      ---------->                                  
                                      C  L  D  L  W  G  Q  G  T  L  V  T  A  S  S  
                    Query_8201   271  GCCTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGCCTCCTCAG  315
D  100.0% (12/12)   IGHD2-21*02  21   ..-------------------------------------------  22
J  95.0% (38/40)    IGHJ5*02     12   -----....C..........................T........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_289531

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCTACGAGGCGAGTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATATCTACGAGGCGAGTCATCAATATAGTGGCTACATGATTAATGACTAC	GKDIYEASHQYSGYMINDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8202   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGATATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ..............................................C......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  G  I  S  E  S  G  G  S  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8202   91   ATTGGGTCTCAGGTATTAGTGAAAGTGGTGGCAGCACAAACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  .G..........C........GT........T......T...............................................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  I  L  Y  L  Q  M  I  S  L  R  A  E  D  T  A  V  Y  Y  C  G  K  D  I  Y  E  A  S  H  
                    Query_8202   181  AGAATATCCTGTATCTACAAATGATCAGCCTCAGAGCCGAGGACACGGCCGTATATTACTGTGGGAAAGATATCTACGAGGCGAGTCATC  270
V  93.6% (234/250)  IGHV3-23*01  227  ....C.CG........G.......A......G...............................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_8202   271  AATATAGTGGCTACATGATTAATGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  97.6% (40/41)    IGHJ4*02     8    ----------------------.............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_289536

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD1-1*01                                                                                            14.1    8.3  
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAACGAGCAGCACCTAC	TACAACT	TTTTCGGTTTT	GACCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAACGAGCAGCACCTACTACAACTTTTTCGGTTTTGACCCC	ARATSSTYYNFFGFDP	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  S  T  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  P  E 
                    Query_8203   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACCGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .................................T.........G.........................C...............T....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  D  G  S  T  T  Y  N  P  S  L  K  S  R  V  T  I  T  V  N  M  S  K  N 
                    Query_8203   91   TGGATTGGATATATTTATTATGATGGGAGCACCACCTACAACCCCTCCCTCAAGAGTCGTGTCACCATAACAGTGAACATGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-59*01  139  ........G.....C.....CAG...........A........................A.........T....AG...C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  T  S  S  T  Y  Y  N  F 
                    Query_8203   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGCAACGAGCAGCACCTACTACAACTTT  270
V  93.4% (228/244)  IGHV4-59*01  229  .............A..................................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD1-1*01   3    ---------------------------------------------------------------------------------.......--  9

                                      -------------->                                  
                                       F  G  F  D  P  W  G  H  G  T  L  V  T  I  S  S  
                    Query_8203   271  TTCGGTTTTGACCCCTGGGGCCACGGAACCCTGGTCACCATCTCCTCAG  319
J  95.0% (38/40)    IGHJ5*02     12   ---------..............G...............G.........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_289537

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           274     8e-76
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	242	3	3	0	0	100
Total	N/A	N/A	239	207	32	0	86.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  G  S  I  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_8204   4    CCCTGAGACTCTCCTGTTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAAT  93
V  86.6% (207/239)  IGHV4-59*01  50   .....TCC...A....CA......................T.GT.A...C....G.............C...................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R  
                    Query_8204   94   GGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGAC  183
V  86.6% (207/239)  IGHV4-59*01  140  ......GG.....C.ATT................C..C...........C.....................G.A.............AC.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G  
                    Query_8204   184  ACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGTG  273
V  86.6% (207/239)  IGHV4-59*01  230  .G...........G....G............T..............G............-------------------------------  288
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  93.3% (14/15)    IGHD3-22*01  7    ----------------------------------------------------------------------------..........A...  20

                                      ---------------------->                                  
                                      G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8204   274  GCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  330
D  93.3% (14/15)    IGHD3-22*01  21   .--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    -------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_289534

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           237     1e-64
IGHD3-16*01                                                                                           12.2    33   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GATCTCCCATTG	TTATGA	GCGGGGCACGGTTTTCGAGTCGGGCTCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTCCCATTGTTATGAGCGGGGCACGGTTTTCGAGTCGGGCTCCCCTTGACCAC	ARSPIVMSGARFSSRAPLDH	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	18	6	0	75
FR2-IMGT	49	99	51	44	7	0	86.3
CDR2-IMGT	100	123	24	18	6	0	75
FR3-IMGT	124	237	114	94	20	0	82.5
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	229	190	39	0	83


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  T  K  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  Q  W  V  S  T  I 
                    Query_8205   13   TGTGCAGCCTCTGGTTTCACCTTCACCAAACATGCCCTGAGTTGGGTCCGACAGGCTCCAGGGAAGGGACTACAGTGGGTCTCAACTATT  102
V  83.0% (190/229)  IGHV3-23*01  64   ..............A........T.G..GCT.....A....C........C.................G..GG...........G.....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  D  G  R  A  T  S  T  L  D  S  V  K  G  R  F  T  I  S  R  D  N  S  I  N  T  L  F  L 
                    Query_8205   103  AGTGGTGATGGTCGTGCCACGTCCACCTTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCATCAACACTTTATTTCTG  192
V  83.0% (190/229)  IGHV3-23*01  154  ......AG....G..AG...A.A.TA.GC............................................AG.....GC.G.A....  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-------------------------CDR3-IMGT----------
                                       Q  L  T  S  L  R  V  D  D  S  A  L  Y  Y  C  A  R  S  P  I  V  M  S  G  A  R  F  S  S  R 
                    Query_8205   193  CAACTGACCAGCCTGAGAGTCGACGACTCGGCCCTCTACTATTGTGCGAGATCTCCCATTGTTATGAGCGGGGCACGGTTTTCGAGTCGG  282
V  83.0% (190/229)  IGHV3-23*01  244  ...A...A...........C...G...A.....G.A..T..C.......-----------------------------------------  292
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  100.0% (6/6)     IGHD3-16*01  4    -------------------------------------------------------------......-----------------------  9

                                      -------------->                                  
                                       A  P  L  D  H  W  G  Q  G  T  L  V  T  V  T  S  
                    Query_8205   283  GCTCCCCTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCACTTCAG  331
J  92.9% (39/42)    IGHJ4*02     7    -------.....T.............................T.C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_289535

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           408     4e-116
IGHD3-3*01                                                                                            44.9    5e-09 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGGCCCG	CGATTTTTGGAGTGGTTATTATA	ATGGGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGGCCCGCGATTTTTGGAGTGGTTATTATAATGGGGGCTTTGAGTAC	ARPARDFWSGYYNGGFEY	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_8206   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGTTA  90
V  95.2% (275/289)  IGHV1-46*01  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  N  P  N  G  G  S  T  R  Y  A  Q
                    Query_8206   91   CTTTATACACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGTGATCAACCCTAATGGTGGTAGTACAAGGTACGCACA  180
V  95.2% (275/289)  IGHV1-46*01  96   ..A...G.............................................A.A..........G.........C.....C........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  G  D  T  A
                    Query_8206   181  GAAGTTCCAGGGCAGAGTCACCATGACCACGGACACGTCCACGAGCACAGTCTACATGGAATTGAGCAGCCTGAGATCTGGGGACACGGC  270
V  95.2% (275/289)  IGHV1-46*01  186  .............................G..............................GC..................A.........  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  P  A  R  D  F  W  S  G  Y  Y  N  G  G  F  E  Y  W  G  Q  G  T  V  V  T
                    Query_8206   271  CGTGTACTACTGTGCGAGACCGGCCCGCGATTTTTGGAGTGGTTATTATAATGGGGGCTTTGAGTACTGGGGCCAGGGAACTGTGGTCAC  360
V  95.2% (275/289)  IGHV1-46*01  276  ......T............-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (23/23)   IGHD3-3*01   7    ---------------------------.......................----------------------------------------  29
J  93.2% (41/44)    IGHJ4*02     5    ---------------------------------------------------------......C.................CC.......  37

                                                 
                                        V  S  S  
                    Query_8206   361  CGTCTCCTCAG  371
J  93.2% (41/44)    IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_296401

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           311     4e-87
IGHD3-3*01                                                                                            14.1    8.1  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TGC	GGAGTGG	ACTTATG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGCGGAGTGGACTTATGGACTCC	ETAEWTYGL	245	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	28	27	0	1	96.4
CDR1-IMGT	29	58	30	26	4	0	86.7
FR2-IMGT	59	109	51	47	4	0	92.2
CDR2-IMGT	110	130	21	14	7	0	66.7
FR3-IMGT	131	244	114	106	8	0	93
CDR3-IMGT (germline)	245	251	7	7	0	0	100
Total	N/A	N/A	251	227	23	1	90.4


Alignments

                                      <---------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT---
                                       T  L  S  P  H  L  H  C  L  W  *  L  H  Q  H  *  *  L  L  L  G  L  D  P  P  A  P  G  E  R 
                    Query_8207   1    ACCCTGTCCCCTCACCTGCACTGTCTCTGGTGACTCCATCAACATTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCGGGGAACGG  90
V  90.4% (227/251)  IGHV4-39*01  49   ..........-.....................G........G..G..G.................................A.....G..  137
                                       T  L  S   L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G

                                      ------------------><-----CDR2-IMGT-----><-------------------------------------------------
                                       T  G  V  A  W  E  C  L  E  Q  W  *  H  L  L  Q  P  V  P  Q  A  S  G  H  R  I  R  R  H  V 
                    Query_8207   91   ACTGGAGTGGCTTGGGAGTGTCTCGAACAGTGGTAACACCTACTACAACCCGTCCCTCAAGCGTCGGGTCACCGTATCCGTAGACACGTC  180
V  90.4% (227/251)  IGHV4-39*01  138  G.........A........A...ATT.T.....G.G.........................A....A......A................  227
                                        L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S

                                      ---FR3-IMGT----------------------------------------------------><----------CDR3-IMGT------
                                       Q  S  S  V  L  P  E  A  E  L  C  D  R  R  R  H  G  C  V  F  L  C  E  T  A  E  W  T  Y  G 
                    Query_8207   181  CAATCATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTTCTGTGCGAGACTGCGGAGTGGACTTATGGA  270
V  90.4% (227/251)  IGHV4-39*01  228  ...GA.C.............A......................................A...........-------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                     
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------------.......---------  21
J  97.5% (39/40)    IGHJ4*02     9    ----------------------------------------------------------------------------------------..  10

                                      --->                                  
                                       L  L  G  P  G  N  P  G  H  R  L  L   
                    Query_8207   271  CTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  308
J  97.5% (39/40)    IGHJ4*02     11   ..A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_114860

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD6-19*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAC	CTTACGGGACGGG	GCAGTGGCTGG	CCTAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACCTTACGGGACGGGGCAGTGGCTGGCCTACGACTAT	ARPYGTGQWLAYDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  M  S  Y
                    Query_8208   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTATGAGTTA  90
V  93.4% (271/290)  IGHV5-51*01  6    .............................................................................G.....CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  E  T  T  Y  S  P
                    Query_8208   91   TTGGATCGCCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACTCTGAAACCACATACAGCCC  180
V  93.4% (271/290)  IGHV5-51*01  96   C.......G..............T...............................A...................T....G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  T  S  L  K  A  S  D  T  A
                    Query_8208   181  GTCGTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAATACCGCATACCTACAGTGGACAAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (271/290)  IGHV5-51*01  186  ...C...C....................................GC.....C.....G.......GC.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  P  Y  G  T  G  Q  W  L  A  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8208   271  CATGTATTACTGTGCGCGACCTTACGGGACGGGGCAGTGGCTGGCCTACGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.4% (271/290)  IGHV5-51*01  276  ................A...---------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (11/11)   IGHD6-19*01  8    ---------------------------------...........---------------------------------------------  18
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_142169

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           288     5e-80
IGHD3-22*01                                                                                           41.1    7e-08
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCGACGCGAGAGG	ACTATGATAGGAGTGGTTATTACT	CCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATTCGACGCGAGAGGACTATGATAGGAGTGGTTATTACTCCGAC	VRDSTREDYDRSGYYSD	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  R  D  Y  F  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_8209   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGGGACTACTTCATGACTTGGATCCGGCAGGCTCCAGGGAAGGGACTGG  90
V  86.8% (217/250)  IGHV3-11*06  47   ....................................C......T.......A.....GC........C.................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  L  R  G  S  Y  S  N  T  A  D  S  V  R  G  R  F  I  T  S  R  D  N  D  
                    Query_8209   91   AGTGGGTTTCATCCATAAGTCTTAGGGGCTCTTACTCAAACACCGCAGACTCTGTGAGGGGCCGATTCATCACCTCCAGAGACAACGACA  180
V  86.8% (217/250)  IGHV3-11*06  137  ............A...T...AG...TA.TAG....A.....TA..............A...........C..T..............C..  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  R  S  M  Y  L  Q  M  N  N  V  R  A  E  D  T  A  V  Y  Y  C  V  R  D  S  T  R  E  D  Y  
                    Query_8209   181  AGAGGTCAATGTACCTGCAAATGAACAATGTGAGAGCCGAAGACACGGCTGTATATTACTGTGTGAGAGATTCGACGCGAGAGGACTATG  270
V  86.8% (217/250)  IGHV3-11*06  227  ...AC...C....T.............GCC..........G...........G..........C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.8% (23/24)    IGHD3-22*01  6    ------------------------------------------------------------------------------------......  11

                                      GT-------------------->                                  
                                      D  R  S  G  Y  Y  S  D  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_8209   271  ATAGGAGTGGTTATTACTCCGACTGGGGCCAGGGAGCCCTGGTCACCGTCTCTTCAG  327
D  95.8% (23/24)    IGHD3-22*01  12   ....T.............---------------------------------------  29
J  94.4% (34/36)    IGHJ4*02     13   ---------------------..............A................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_142168

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-28*01                                                                                           367     6e-104
IGHD1-26*01                                                                                           14.1    8.3   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-28*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAA	TTGCATCGGTCGCGC	GTGGGAG	T	TACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGCATCGGTCGCGCGTGGGAGTTACGTTGACTAC	ARIASVARGSYVDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	112	2	0	98.2
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	241	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  N  N  W  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_8210   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCATCAGCAGTAATAACTGGTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGACTG  90
V  97.6% (241/247)  IGHV4-28*01  49   ..............................................G...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  S  N  W  W  G  W  I  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  S  I  S  Y  T  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 
                    Query_8210   91   GAGTGGATTGGGTCCATCTCTTATACTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAG  180
V  97.6% (241/247)  IGHV4-28*01  139  .............A.....A.....G................................................................  228
                                       E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  R  S  V  T  A  V  D  T  A  V  Y  F  C  A  R  I  A  S  V  A  R  G  S 
                    Query_8210   181  AACCAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGTGGACACGGCCGTGTATTTCTGTGCGAGAATTGCATCGGTCGCGCGTGGGAGT  270
V  97.6% (241/247)  IGHV4-28*01  229  .......................C...............................A...........-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  V  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD1-26*01  7    ----------------------------------------------------------------------------------.......-  13

                                      ----------->                                  
                                       Y  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8210   271  TACGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.8% (45/46)    IGHJ4*02     3    ...T..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_278939

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AGCCTTTCACA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGAAGCCTTTCACATTGACTAC	GREAFHIDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  R  S  S  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_8211   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGGAGTTCTAGCATGACCTGGGTCCGCCAGGCTCCGGGGAAGGGACTGG  90
V  92.0% (230/250)  IGHV3-21*01  47   ....................................C......T..C.A........A..................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  N  S  A  S  N  F  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_8211   91   AGTGGGTCTCATCCATTAATAGTGCTAGTAATTTCATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  92.0% (230/250)  IGHV3-21*01  137  ..................G....AG.....G..A....................................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  V  F  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  F  C  G  R  E  A  F  H  I  D  Y  
                    Query_8211   181  AGAACTCAGTCTTTCTGCAGATGAGCAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGGGAGAGAAGCCTTTCACATTGACTACT  270
V  92.0% (230/250)  IGHV3-21*01  227  ........C.G.A......A....A................................A.....C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------------.........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8211   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (42/42)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_142161

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           382     3e-108
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTTGTGG	TACTCTGGTTCGGGGAGT	AAAACCCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTTGTGGTACTCTGGTTCGGGGAGTAAAACCCATTTTGACTAC	ARGLWYSGSGSKTHFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_8212   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (247/250)  IGHV4-31*03  49   .............................................................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8212   91   CTGGAGTGGATTGGGTACATTTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (247/250)  IGHV4-31*03  139  ....................C.....................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  W  Y  S  G  S 
                    Query_8212   181  AAGAACCAGTTCTCCCTGAAGCTGCGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGTTTGTGGTACTCTGGTTCG  270
V  98.8% (247/250)  IGHV4-31*03  229  ........................A.............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  5    ------------------------------------------------------------------------------....A.......  16

                                      MGT-------------------->                                  
                                       G  S  K  T  H  F  D  Y  W  G  Q  G  T  L  V  T  V  A  S  
                    Query_8212   271  GGGAGTAAAACCCATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCGCCTCAG  328
D  94.4% (17/18)    IGHD3-10*01  17   ......----------------------------------------------------  22
J  97.7% (42/43)    IGHJ4*02     6    ---------------....................................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_142163

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAG	TTACTTTGATAGTAGTG	ATAATGCTCAGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTACTTTGATAGTAGTGATAATGCTCAGGACGGTATGGACGTC	ARESYFDSSDNAQDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  T  Y  S  L  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8213   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTAAGTACCTATAGCTTGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-21*01  47   ........................................C....G.......A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  H  I  S  G  N  S  K  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8213   91   ACTGGGTATCACACATTAGTGGTAATAGTAAACACATATATTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.6% (234/250)  IGHV3-21*01  137  .G.....C...TC.......A...G.....GTT.......C.................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  F  L  Q  M  N  R  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  S  Y  F  D  S  S  
                    Query_8213   181  AGAACTCACTGTTTTTGCAAATGAACAGGCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAAAGTTACTTTGATAGTAGTG  270
V  93.6% (234/250)  IGHV3-21*01  227  ............A.C.............C.........................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  94.1% (16/17)    IGHD3-22*01  4    -------------------------------------------------------------------------.....A...........  20

                                      IMGT--------------------->                                 
                                      D  N  A  Q  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8213   271  ATAATGCTCAGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_142165

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           310     1e-86
IGHD2-2*01                                                                                            12.2    34   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	GGACGAGG	GGACATTGCGGTAGT	GTTACCTGTTTTAATGGGAAATATGACA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGACGAGGGGACATTGCGGTAGTGTTACCTGTTTTAATGGGAAATATGACATTGACTAC	VRTRGHCGSVTCFNGKYDIDY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  D  F  T  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_8214   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAGTGACTTTACTATGCACTGGGTCCGCCAGGTTCCAGGGAAGGGACTGG  90
V  90.2% (222/246)  IGHV3-64*05  47   ............................................AG..A.G.....................C.................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  A  I  S  S  D  G  G  A  T  T  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8214   91   AATTTGTTTCAGCTATCAGTAGTGATGGGGGTGCCACAACCTACGGAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  90.2% (222/246)  IGHV3-64*05  137  ...A............T......A........AG....TA.....C............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  F  L  H  L  S  S  L  R  P  E  D  T  S  I  Y  F  C  V  R  T  R  G  H  C  G  S  
                    Query_8214   181  AGAACACACTGTTTCTTCATTTGAGCAGTCTGAGACCTGAGGACACATCTATTTATTTCTGTGTGAGGACGAGGGGACATTGCGGTAGTG  270
V  90.2% (222/246)  IGHV3-64*05  227  .......G....A.G....AA..............G..........GG..G.G....A........------------------------  292
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V                          
D  80.0% (12/15)    IGHD2-2*01   2    --------------------------------------------------------------------------...T....TA.....-  16

                                      DR3-IMGT-------------------------->                                  
                                      V  T  C  F  N  G  K  Y  D  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8214   271  TTACCTGTTTTAATGGGAAATATGACATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_142166

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           346     2e-97
IGHD2-15*01                                                                                           39.1    3e-07
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	T	GGATATTGTCGTGGTGGTGCCTGCTACTC	AACGGGTCGGGGGACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGATATTGTCGTGGTGGTGCCTGCTACTCAACGGGTCGGGGGACTTTTGACTAC	ARHGYCRGGACYSTGRGTFDY	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  S  T  H  H  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_8215   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGACTCCATCAGCAGCAGTACTCACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.0% (236/251)  IGHV4-39*01  49   .............................T.G............T....G.T..T...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       P  E  W  I  G  S  V  Y  Y  S  G  R  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8215   91   CCGGAGTGGATTGGGAGTGTCTATTATAGTGGGAGAACCTACGACAACCCGTCTCTCAAGAGTCGAGTCACCATATCTGTCGACACGTCC  180
V  94.0% (236/251)  IGHV4-39*01  139  .T................A................C......T..........C.......................C..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  H  G  Y  C  R  G  G 
                    Query_8215   181  AAGAATCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTTTTACTGTGCGAGACATGGATATTGTCGTGGTGGT  270
V  94.0% (236/251)  IGHV4-39*01  229  .....C.................................................A...............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.7% (26/29)    IGHD2-15*01  2    ------------------------------------------------------------------------.........A........  19

                                      CDR3-IMGT-------------------------->                                  
                                       A  C  Y  S  T  G  R  G  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8215   271  GCCTGCTACTCAACGGGTCGGGGGACTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  89.7% (26/29)    IGHD2-15*01  20   AG.........-----------------------------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_306448

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           371     8e-105
IGHD3-22*01                                                                                           16.1    2.6   
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCGTGGGGG	CTAAGATAGAAGTG	ACTGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGTGGGGGCTAAGATAGAAGTGACTGATGATGGCTTTGATATC	AGVGAKIEVTDDGFDI	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	66	5	0	93
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	101	13	0	88.6
CDR3-IMGT (germline)	291	293	3	3	0	0	100
Total	N/A	N/A	287	262	25	0	91.3


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  S  E  L  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  R  F  Y  G  
                    Query_8216   7    TGCAGCTGGTGCAGTCTGGATCAGAACTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGGTCTGGATACAGGTTTTACGGCC  96
V  91.3% (262/287)  IGHV5-51*03  5    ....................G....GG........................A...............T...........C...AC.A..T  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      H  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  T  I  Y  P  A  D  S  D  T  K  Y  S  
                    Query_8216   97   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGACCATCTATCCTGCTGACTCTGATACCAAATACAGCC  186
V  91.3% (262/287)  IGHV5-51*03  95   ......................................................T...........G..............G........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  D  G  H  I  T  I  S  A  D  K  S  I  S  T  A  Y  L  H  W  S  S  L  R  A  S  D  T  
                    Query_8216   187  CGTCCTTTGATGGCCACATCACCATCTCAGCCGACAAGTCCATCAGTACCGCTTACCTACACTGGAGCAGCCTGAGGGCCTCGGACACCG  276
V  91.3% (262/287)  IGHV5-51*03  185  .......CC.A.....GG............................C.....C.....G..G.............A..............  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-------------------CDR3-IMGT------------------>                            
                                      A  T  Y  Y  C  A  G  V  G  A  K  I  E  V  T  D  D  G  F  D  I  W  G  Q  G  T  M  V  T  V  
                    Query_8216   277  CCACATATTACTGTGCGGGCGTGGGGGCTAAGATAGAAGTGACTGATGATGGCTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCT  366
V  91.3% (262/287)  IGHV5-51*03  275  ...TG............-------------------------------------------------------------------------  291
                                      A  M  Y  Y  C  A                                                                          
D  85.7% (12/14)    IGHD3-22*01  7    ---------------------------...T.....T....-------------------------------------------------  20
J  96.0% (48/50)    IGHJ3*02     1    ----------------------------------------------.....CT.....................................  44

                                            
                                      S  S  
                    Query_8216   367  CTTCAG  372
J  96.0% (48/50)    IGHJ3*02     45   ......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_306449

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           324     8e-91
IGHD3-3*01                                                                                            23.8    0.011
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTCTTTAATG	ACGATTATTGGAGTG	ATGATTTTCGTCGACACCTAGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCTTTAATGACGATTATTGGAGTGATGATTTTCGTCGACACCTAGGGCTTGACAAC	ARHVFNDDYWSDDFRRHLGLDN	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	229	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  V  T  A  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_8217   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCTGTCACTGCCAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  91.2% (229/251)  IGHV4-39*01  49   ...............................G...CA...GCAGT............................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  H  T  S 
                    Query_8217   91   CTGGAGTGGATTGGAAATATCTATTATAGTGGGACCACCTACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCCGTGCACACGTCC  180
V  91.2% (229/251)  IGHV4-39*01  139  ..............G.G.................G...............G.......................A.....AG........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  H  V  F  N  D  D  Y 
                    Query_8217   181  AAGAATCAGTTCTCCCTGAGGCTGAATTCTGTGACCGCCGCAGACTCGGCTGTATATTACTGTGCGAGACATGTCTTTAATGACGATTAT  270
V  91.2% (229/251)  IGHV4-39*01  229  .....C.............A.....GC..................A.......G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  93.3% (14/15)    IGHD3-3*01   6    ----------------------------------------------------------------------------------......T.  13

                                      --CDR3-IMGT--------------------------->                                  
                                       W  S  D  D  F  R  R  H  L  G  L  D  N  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_8217   271  TGGAGTGATGATTTTCGTCGACACCTAGGGCTTGACAACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  343
D  93.3% (14/15)    IGHD3-3*01   14   .......------------------------------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    -------------------------------.....T........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_306441

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           341     5e-96
IGHD4-17*01                                                                                           12.2    33   
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CAAGCCCTGGCGGA	TGACTA	AATT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACAAGCCCTGGCGGATGACTAAATTCTACTATTACGGTATAGACGTC	AKDKPWRMTKFYYYGIDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  D  H  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8218   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTCAGTGACCATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-30*18  47   ......................................T.....AG.T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  V  S  Y  D  G  N  D  K  Y  Y  L  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_8218   91   AGTGGGTGGCAGTTGTTTCATATGATGGAAATGATAAATACTATTTAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-30*18  137  ..............A.A.............G.A...........GC.........................A..................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  K  P  W  R  M  T  
                    Query_8218   181  AGAACACCCTATATCTGCAAATGAACAGCCTGAGACCTGAAGACACAGCTGTGTATTACTGTGCGAAAGACAAGCCCTGGCGGATGACTA  270
V  93.6% (234/250)  IGHV3-30*18  227  .......G..G........................G....G.....G.......................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD4-17*01  1    ------------------------------------------------------------------------------------......  6

                                      IMGT--------------------->                              
                                      K  F  Y  Y  Y  G  I  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_8218   271  AATTCTACTATTACGGTATAGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  326
J  96.2% (50/52)    IGHJ6*02     8    ----......C........G....................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_306443

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     3e-90
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	242	26	6	88.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_8219   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.3% (242/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_8219   91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.3% (242/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_8219   181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.3% (242/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_8219   271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.3% (242/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_306444

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            347     8e-98
IGHD2-8*02                                                                                            21.8    0.044
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAA	AGTCACGGGGGGG	AGGATATGGTACTG	ATAATAAGTACTAGTC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAAGTCACGGGGGGGAGGATATGGTACTGATAATAAGTACTAGTCACTTCTACTACGGTCTGGACGTC	AKSHGGEDMVLIISTSHFYYGLDV	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  E  A  S  G  F  T  F  S  D  F  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8220  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAGTGATTTTGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  94.8% (235/248)  IGHV3-9*01  47   .....................C...................GA.....A.........................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  S  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8220  91   AGTGGGTCTCAAGCATTAGTTGGAATAGTGGCAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (235/248)  IGHV3-9*01  137  ...........G.T.................T..........................................................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><---------------------------
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  L  Y  Y  C  A  K  S  H  G  G  E  D  M  
                    Query_8220  181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGCGAGTTGACGACACGGCCTTGTACTATTGTGCAAAAAGTCACGGGGGGGAGGATATGG  270
V  94.8% (235/248)  IGHV3-9*01  227  ..........G.....................A...C...G..............T..C.........----------------------  294
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD2-8*02  1    ---------------------------------------------------------------------------------.......T.  9

                                     ----CDR3-IMGT------------------------------>                              
                                     V  L  I  I  S  T  S  H  F  Y  Y  G  L  D  V  W  G  Q  G  T  T  F  T  V  S 
                    Query_8220  271  TACTGATAATAAGTACTAGTCACTTCTACTACGGTCTGGACGTCTGGGGCCAGGGGACCACGTTCACCGTCTCC  344
D  92.9% (13/14)    IGHD2-8*02  10   .....---------------------------------------------------------------------  14
J  92.5% (49/53)    IGHJ6*02    7    ---------------------...A..........A................A.........G...........  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_306446

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           343     2e-96
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATTTGGTCGCCACCTTCAAC	TACTATGATA	ATTACTCGGGAAGTAAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATTTGGTCGCCACCTTCAACTACTATGATAATTACTCGGGAAGTAATTGGTTCGACCGC	ARNLVATFNYYDNYSGSNWFDR	241	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	126	24	20	4	0	83.3
FR3-IMGT	127	240	114	112	2	0	98.2
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  S  G  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_8221   2    CCCTGTCCCTCACCTGCGCAGCCTCTGGATTCACCTTCAGTGGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  94.7% (232/245)  IGHV3-48*03  50   .....AGA...T....T........................A................................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  L  S  Y  I  S  S  S  G  A  T  R  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  
                    Query_8221   92   GGCTTTCATACATCAGTAGTAGTGGTGCTACCAGATTCTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGA  181
V  94.7% (232/245)  IGHV3-48*03  140  ..G..........T............AG.....T..A.....................................................  229
                                      W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><----------------------------CD
                                      N  S  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  N  L  V  A  T  F  N  Y  
                    Query_8221   182  ACTCACTGTATCTGCAAATCAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAAATTTGGTCGCCACCTTCAACTACT  271
V  94.7% (232/245)  IGHV3-48*03  230  ...................G.............................................-------------------------  294
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (10/10)   IGHD3-22*01  5    --------------------------------------------------------------------------------------....  8

                                      R3-IMGT--------------------------->                                  
                                      Y  D  N  Y  S  G  S  N  W  F  D  R  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_8221   272  ATGATAATTACTCGGGAAGTAATTGGTTCGACCGCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  340
D  100.0% (10/10)   IGHD3-22*01  9    ......---------------------------------------------------------------  14
J  95.7% (44/46)    IGHJ5*02     6    -----------------------..........C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_306447

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD3-16*02                                                                                           18.0    0.68  
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATGATAGTGGC	AGTTATCTTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGCAGTTATCTTTATTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_8222   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTACCAACTA  90
V  95.5% (278/291)  IGHV5-51*01  6    .................................................................G...........G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  D  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_8222   91   CTGGATCGACTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ........G...................................................................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  I  T  I  S  A  D  N  S  I  G  T  A  Y  L  Q  L  H  S  L  K  A  S  D  T  A
                    Query_8222   181  GTCCTTCGAAGGCCAAATCACCATCTCAGCCGACAACTCCATCGGCACCGCCTACCTGCAGTTGCACAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  .......C.......GG...................G......A..................G.AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_8222   271  CATGTATTACTGTGCGAGACATGGGGATGATAGTGGCAGTTATCTTTATTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD3-16*02  23   -------------------------------------.......G....-----------------------------------------  34
J  98.1% (53/54)    IGHJ6*02     9    -------------------------------------------------....A....................................  49

                                                   
                                        T  V  S  S 
                    Query_8222   361  CACCGTCTCCTCA  373
J  98.1% (53/54)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_30100

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     3e-91
IGHD4-17*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTGCGC	TGACTAAGGTG	GGCTGGAGATTCG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGCGCTGACTAAGGTGGGCTGGAGATTCGGGTTCTTCGATCTC	ATALTKVGWRFGFFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  R  L  
                    Query_8223   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTTAGCAACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGAGGCTGG  90
V  92.3% (227/246)  IGHV3-23*01  47   ........................C....................G...........G.........................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  A  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  S  
                    Query_8223   91   AGTGGGTCTCAAGTATCAGTGCCAGTGGTGGTAGTACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACACATCCA  180
V  92.3% (227/246)  IGHV3-23*01  137  ...........GC...T....GT...........C.................................................AT....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  Y  T  L  Y  L  E  M  N  S  L  R  V  A  D  T  A  V  Y  Y  C  A  T  A  L  T  K  V  G  W  
                    Query_8223   181  AGTACACACTGTATCTAGAAATGAACAGCCTGAGAGTCGCGGACACGGCCGTCTATTACTGTGCGACTGCGCTGACTAAGGTGGGCTGGA  270
V  92.3% (227/246)  IGHV3-23*01  227  ..A....G........GC..................C..A............A.............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.9% (10/11)    IGHD4-17*01  1    ------------------------------------------------------------------------......C....-------  11

                                      T------------------>                                  
                                      R  F  G  F  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8223   271  GATTCGGGTTCTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
J  97.9% (47/48)    IGHJ2*01     6    ------...A............................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_30101

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           213     2e-57
IGHD3-16*01                                                                                           25.7    0.003
IGHJ3*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACCTAT	GTTTGGGGGAGTT	TACGCCGCAATCACGATTGCCTTAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACCTATGTTTGGGGGAGTTTACGCCGCAATCACGATTGCCTTACTGTC	ARGLLIEDPTYVWGSLRRNHDCLTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	35	16	0	68.6
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	87	27	0	76.3
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	190	54	0	77.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  V  R  Q  P  P  G  G  G  L  Q 
                    Query_8224   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGAACTTACTACTGGCACTGGGTGCGGCAACCTCCAGGGGGGGGTCTGCAG  90
V  77.9% (190/244)  IGHV4-59*01  49   .......................C.......G.......A.T.G..........AG....A.C.....G..C......AA...A...G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  A  M  F  L  S  T  G  T  T  L  Y  N  P  S  V  R  G  R  V  T  V  S  G  D  M  S  R  N 
                    Query_8224   91   TGGCTTGCCATGTTCTTATCCACTGGGACCACCCTCTACAACCCCTCCGTCAGGGGTCGTGTCACCGTGTCGGGCGACATGTCTCGGAAT  180
V  77.9% (190/244)  IGHV4-59*01  139  ...A...GGTATA...AT.A..G.....G....AA.............C...A.A....A......A.A..A.TA....C...CAA...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_8224   181  CAGTTGTCCCTCAACCTCATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACCTAT  270
V  77.9% (190/244)  IGHV4-59*01  229  .....C.....G..G..G.G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  L  R  R  N  H  D  C  L  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_8224   271  GTTTGGGGGAGTTTACGCCGCAATCACGATTGCCTTACTGTCTGGGGCCAGGGGACACCGGTCACCGTCTCTTCAG  346
D  100.0% (13/13)   IGHD3-16*01  14   .............---------------------------------------------------------------  26
J  92.1% (35/38)    IGHJ3*01     13   --------------------------------------............A......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_30102

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           327     8e-92
IGHD2-2*02                                                                                            10.3    114  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GGGCG	ATACC	GTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGGCGATACCGTATTTGACCAC	ARGDTVFDH	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	228	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  F  T  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8225   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTAGCTTCTTTACCTACTGGATGAACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  92.3% (228/247)  IGHV3-74*01  47   ..................................C.C....AG..G..........C.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  L  V  A  R  I  D  R  D  G  R  I  T  S  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8225   91   TGTTGGTCGCACGTATTGATAGAGATGGGAGAATCACAAGCTTCGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.3% (228/247)  IGHV3-74*01  137  ...G....T........A....T........T.G........A...............................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      R  D  T  L  Y  L  Q  M  D  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  G  D  T  V  F  D  H  
                    Query_8225   181  GGGACACGCTTTATCTGCAAATGGACAGTCTGAGAGGCGAGGACACGGCTGTGTATTATTGTGCAAGGGGCGATACCGTATTTGACCACT  270
V  92.3% (228/247)  IGHV3-74*01  227  A.A.......G............A............C.....................C........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-2*02   27   ------------------------------------------------------------------------.....-------------  31
J  97.7% (42/43)    IGHJ4*02     6    --------------------------------------------------------------------------------......T...  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8225   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  97.7% (42/43)    IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_30104

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           338     5e-95
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GGG	CTATGCTTCGGGGAGTCATT	TCAAATCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGGGCTATGCTTCGGGGAGTCATTTCAAATCTCACTTTGACTAC	AKEGYASGSHFKSHFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  T  P  G  Q  G  L  
                    Query_8226   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAGTTATGGCATGCACTGGGTCCGCCAGACTCCAGGCCAGGGACTGG  90
V  93.2% (233/250)  IGHV3-30*18  47   ...........................................T..C........................G........A....G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  V  S  S  D  G  S  V  Q  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8226   91   AGTGGCTGGCAGTTGTATCAAGTGATGGAAGTGTTCAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCC  180
V  93.2% (233/250)  IGHV3-30*18  137  .....G........A.....TA..........AA.A.....................................................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      Q  N  T  L  Y  L  Q  M  N  S  L  R  S  E  D  T  A  V  Y  Y  C  A  K  E  G  Y  A  S  G  S  
                    Query_8226   181  AGAACACGCTGTATCTGCAAATGAATAGCCTGAGATCTGAGGATACGGCTGTTTATTACTGTGCGAAAGAGGGCTATGCTTCGGGGAGTC  270
V  93.2% (233/250)  IGHV3-30*18  227  .........................C.........G.......C........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (18/20)    IGHD3-10*01  7    -------------------------------------------------------------------------.....G..........T  23

                                      GT-------------------->                                  
                                      H  F  K  S  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8226   271  ATTTCAAATCTCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  90.0% (18/20)    IGHD3-10*01  24   ...------------------------------------------------------  26
J  100.0% (45/45)   IGHJ4*02     4    ------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_30105

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           251     9e-69
IGHD3-16*01                                                                                           25.7    0.003
IGHJ6*02                                                                                              58.4    1e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTT	TTCACCGCAATCACAATTGCTATACT	GTCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCACCGCAATCACAATTGCTATACTGTC	ARGLLIEDPNYVWGSFHRNHNCYTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	41	10	0	80.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	92	22	0	80.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	202	42	0	82.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  G  L  E 
                    Query_8227   1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  82.8% (202/244)  IGHV4-59*01  49   ..................A....C.......G.......A...G..........AG....A.C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_8227   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  82.8% (202/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  N  Y 
                    Query_8227   181  CAGTTGTCTCTCAACCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCAACTAT  270
V  82.8% (202/244)  IGHV4-59*01  229  .....C..C..G..G....G.TCT.....................GT.....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                 
                                       V  W  G  S  F  H  R  N  H  N  C  Y  T  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_8227   271  GTTTGGGGGAGTTTTCACCGCAATCACAATTGCTATACTGTCTGGGGCCAAGGGACACCGGTCACCGTCTCCTCA  345
D  100.0% (13/13)   IGHD3-16*01  14   .............--------------------------------------------------------------  26
J  94.4% (34/36)    IGHJ6*02     27   ---------------------------------------.................CA.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_30107

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           400     9e-114
IGHD2-8*02                                                                                            14.1    9.5   
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGT	TACTGGT	ACCAACGCCCC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTTACTGGTACCAACGCCCCCTACGGTCTGGACGTC	ARLVTGTNAPYGLDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	272	16	0	94.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  T  S  Y 
                    Query_8228   2    CAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCTTCTGGTTACACCTTTACCAGTTAC  91
V  94.4% (272/288)  IGHV1-18*04  7    ....................T..........................................G......................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_8228   92   GGTATCACTTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  181
V  94.4% (272/288)  IGHV1-18*04  97   .......GC........A..............A................................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  S  D  D  T  A 
                    Query_8228   182  ATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.4% (272/288)  IGHV1-18*04  187  .A.C...A..G.................C....................C..........C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  L  V  T  G  T  N  A  P  Y  G  L  D  V  W  G  Q  G  S  K  V  T  V  S  S 
                    Query_8228   272  GTGTATTACTGTGCGAGACTGGTTACTGGTACCAACGCCCCCTACGGTCTGGACGTCTGGGGCCAAGGGAGCAAGGTCACCGTCTCCTCA  361
V  94.4% (272/288)  IGHV1-18*04  277  ..................------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (7/7)     IGHD2-8*02   10   -----------------------.......------------------------------------------------------------  16
J  93.9% (46/49)    IGHJ6*02     14   -----------------------------------------.......A.....................C..C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_30108

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           325     3e-91
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATA	CTACAGGTCG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACAGGTCGTGATCCTTTTGATTTC	ARVSREYYDTTGRDPFDF	230	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	110	4	0	96.5
CDR3-IMGT (germline)	230	236	7	7	0	0	100
Total	N/A	N/A	224	216	8	0	96.4


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_8229   13   GTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATTTGGTATGA  102
V  96.4% (216/224)  IGHV3-33*01  72   ...................AG..A.........................................................A........  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N
                    Query_8229   103  TGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACGTTGTATCTGCAAATGAA  192
V  96.4% (216/224)  IGHV3-33*01  162  .............................................................T...........C................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------------------CDR3-IMGT---------------------
                                        S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  T  T  G  R  D  P  F  D  F
                    Query_8229   193  CAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATACTACAGGTCGTGATCCTTTTGATTT  282
V  96.4% (216/224)  IGHV3-33*01  252  .......A...................G................----------------------------------------------  295
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (10/10)   IGHD3-22*01  5    -------------------------------------------------------..........-------------------------  14
J  92.0% (46/50)    IGHJ3*01     1    ---------------------------------------------------------------------------....G........G.  15

                                      >                                  
                                        W  G  Q  G  T  I  L  T  V  S  S  
                    Query_8229   283  CTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  317
J  92.0% (46/50)    IGHJ3*01     16   ..................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_30109

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.3  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	ATTTCTTAGGG	GCTCGTC	AGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACATTTCTTAGGGGCTCGTCAGGCTTTCACTAC	TFLRGSSGFHY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	101	13	0	88.6
CDR3-IMGT (germline)	249	250	2	2	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  D  L  D  W  V  R  Q  A  S  G  K  G  L  
                    Query_8230   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGATTTGGACTGGGTCCGCCAGGCTTCCGGGAAAGGCCTGG  90
V  90.8% (227/250)  IGHV3-73*01  47   .........A.........................................C.A..C............................G....  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  M  R  T  K  D  D  N  Y  A  T  L  Y  A  A  S  V  R  G  R  F  T  I  S  R  D  
                    Query_8230   91   AGTGGGTTGGCCGTATGAGAACCAAAGATGACAATTACGCGACACTATATGCTGCGTCGGTGAGAGGCAGGTTCACCATCTCCAGAGATG  180
V  90.8% (227/250)  IGHV3-73*01  137  ................T....G.....C.A...G..........GC.................A..........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  N  M  A  Y  L  Q  M  S  G  L  D  T  E  D  T  A  L  Y  F  C  T  F  L  R  G  S  S  
                    Query_8230   181  ATTCAAAGAACATGGCTTATCTGCAAATGAGCGGCCTGGACACCGAGGACACGGCCCTTTACTTCTGTACATTTCTTAGGGGCTCGTCAG  270
V  90.8% (227/250)  IGHV3-73*01  227  ............C...G.............A.A.....A.A...............G.G..T.A......--------------------  296
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------.......--  17

                                      ---------->                                  
                                      G  F  H  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_8230   271  GCTTTCACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  315
J  95.5% (42/44)    IGHJ4*02     5    -....G.................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_246559

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            382     4e-108
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8231   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  P  R  D  N  A  
                    Query_8231   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCCCCAGAGACAACGCCA  180
V  98.8% (247/250)  IGHV3-7*01   137  ..................................................................T.......T...............  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_8231   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  98.8% (247/250)  IGHV3-7*01   227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8231   271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_246558

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           349     2e-98
IGHD5-18*01                                                                                           18.0    0.60 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CCAG	GGACACACCTATGGT	CATAGACACGTCA	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCCAGGGACACACCTATGGTCATAGACACGTCAAACTGGTTCGACCCC	AKARDTPMVIDTSNWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  P  G  F  T  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8232   1    GGTCCCTGAGACTCTCCTGTGCAGCCCCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-23*01  47   ..........................T..............................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  V  S  T  Y  Y  V  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_8232   91   AGTGGGTCTCAGGTATAAGTGGTAGTGGTGTAAGCACATACTACGTAGACTCCGTGAAGGGCCGCTTCACCGTCTCCAGAGACAATGCCA  180
V  94.8% (236/249)  IGHV3-23*01  137  ............C...T.............GT.............C..................G......A..............T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  A  A  I  Y  Y  C  A  K  A  R  D  T  P  M  V  
                    Query_8232   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACGCGGCCATATATTACTGTGCGAAAGCCAGGGACACACCTATGGTCA  270
V  94.8% (236/249)  IGHV3-23*01  227  ........C...................................A.....G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  86.7% (13/15)    IGHD5-18*01  3    -------------------------------------------------------------------------...T...G.......--  17

                                      IMGT--------------------->                                  
                                      I  D  T  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8232   271  TAGACACGTCAAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
J  100.0% (49/49)   IGHJ5*02     3    -----------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_213560

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            330     1e-92
IGHD4-17*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	227	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  *  V  R  Q  P  P  G  K  G  L 
                    Query_8233   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGAGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.4% (227/243)  IGHV4-4*02   49   ...................C........................T..T..............G...........................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  R  S  E 
                    Query_8233   91   GAGTGGATTGGGGAGATCTCTCTTAGTGGGAGCACCAGCTACAACCCATCCCTCAAGTCTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  93.4% (227/243)  IGHV4-4*02   139  ..............A....A..A..............A.........G.........AG............A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  M  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_8233   181  AACCAGTTCTCCCTGATGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  93.4% (227/243)  IGHV4-4*02   229  ................A.....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8233   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_213561

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           366     2e-103
IGHD1-1*01                                                                                            12.2    32    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTAC	AEEKRRVPRGTFHY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8234   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-23*01  47   ................................T.........G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  
                    Query_8234   91   AGTGGGTCTCAGCCATTAGTGGTGGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGA  180
V  96.8% (242/250)  IGHV3-23*01  137  .............T.........A......................................................G.........C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  
                    Query_8234   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGG  270
V  96.8% (242/250)  IGHV3-23*01  227  .................................................................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------------------------......------------  17

                                      ------------->                                  
                                      G  T  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8234   271  GAACCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (43/44)    IGHJ4*02     5    ----....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_213566

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           336     1e-94
IGHD3-3*01                                                                                            29.5    2e-04
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CATCGATCCCGGGG	ATTACGATTTCGGGAGTGGTT	T	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACATCGATCCCGGGGATTACGATTTCGGGAGTGGTTTCTACGGTTTGGACGTC	ARDIDPGDYDFGSGFYGLDV	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	131	27	21	3	3	77.8
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	253	236	14	3	93.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  V  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8235   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTACCTATGTCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.3% (236/253)  IGHV3-33*01  47   .............................................G.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><--------CDR2-IMGT--------><------------------------------------------------
                                      E  W  V  A  V  I  W  N  D  G  T  D  N  K  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  
                    Query_8235   91   AGTGGGTGGCAGTTATATGGAATGATGGAACTGATAATAAGAATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATT  180
V  93.3% (236/253)  IGHV3-33*01  137  ....................T.........---G......AT.C..............................................  223
                                      E  W  V  A  V  I  W  Y  D  G     S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  

                                      ----FR3-IMGT----------------------------------------------------><------------------------
                                      S  K  N  T  L  Y  L  Q  A  N  S  V  R  D  E  D  T  A  V  Y  Y  C  A  R  D  I  D  P  G  D  
                    Query_8235   181  CCAAGAACACGCTGTATTTGCAAGCGAACAGTGTGAGAGACGAGGACACGGCTGTCTATTACTGTGCGAGAGACATCGATCCCGGGGATT  270
V  93.3% (236/253)  IGHV3-33*01  224  .................C.....AT......CC......C...............G.................-----------------  296
                                      S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                    
D  90.5% (19/21)    IGHD3-3*01   3    ---------------------------------------------------------------------------------------...  5

                                      -CDR3-IMGT------------------------>                                 
                                      Y  D  F  G  S  G  F  Y  G  L  D  V  W  G  Q  G  T  T  V  I  D  S  S 
                    Query_8235   271  ACGATTTCGGGAGTGGTTTCTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCATCGACTCCTCA  338
D  90.5% (19/21)    IGHD3-3*01   6    .......TT.........--------------------------------------------------  23
J  93.9% (46/49)    IGHJ6*02     14   -------------------.......A..............................C..T.......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_213567

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         360     1e-101
IGHD3-10*01                                                                                           10.3    115   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GA	GGGGA	CAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAGGGGACATTATGGACGTC	ARGGDIMDV	244	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_8236     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  H  S  G  L  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  R  S 
                    Query_8236     91   CTGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACAGGTCC  180
V  96.0% (240/250)  IGHV4-30-2*01  139  ..............G......T...........AG..C.T...A......................G.......................  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                         K  N  Q  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  D  I  M  D  V 
                    Query_8236     181  AAGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAGGGGACATTATGGACGTC  270
V  96.0% (240/250)  IGHV4-30-2*01  229  ...........C.......A..................................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01    16   ------------------------------------------------------------------------.....-------------  20
J  100.0% (43/43)   IGHJ6*02       20   --------------------------------------------------------------------------------..........  29

                                                                         
                                         W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8236     271  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  303
J  100.0% (43/43)   IGHJ6*02       30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_213564

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           382     3e-108
IGHD3-16*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGCTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGCTTGGGGGAGTCCGGGACAC	ARDDDAWGSPGH	261	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	22	2	0	91.7
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	110	4	0	96.5
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	256	12	0	95.5


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  
                    Query_8237   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGC  90
V  95.5% (256/268)  IGHV4-59*01  26   ................T.....................................G........G..........................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_8237   91   AGCCCCCAGGAAAGGGACTGGAGTGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  95.5% (256/268)  IGHV4-59*01  116  ..........G....................GT........T.......G........................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  
                    Query_8237   181  TATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATG  270
V  95.5% (256/268)  IGHV4-59*01  206  ....................................A.....G.....................G.C.....................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     
D  89.5% (17/19)    IGHD3-16*01  7    ----------------------------------------------------------------------------------------..  8

                                      ----CDR3-IMGT------------>                                  
                                      D  D  A  W  G  S  P  G  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8237   271  ATGACGCTTGGGGGAGTCCGGGACACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  330
D  89.5% (17/19)    IGHD3-16*01  9    ..T...T..........-------------------------------------------  25
J  97.2% (35/36)    IGHJ4*02     13   ------------------------................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_213565

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-22*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TAAGATATCG	AGTAGTGG	CGTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAAGATATCGAGTAGTGGCGTCGACTAC	ASKISSSGVDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  N  Y  F  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_8238   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTAATTACTTCTGGAGCTGGATTCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  92.1% (223/242)  IGHV4-59*01  49   ......................................C....G.....A............C..................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  L  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  I  D  T  P  K  N 
                    Query_8238   91   TGGATTGGGTATATCTATTATAGTGGACTCACCAAGTACAACCCGTCCCTCAAGAGTCGAGTCAGCATATCAATTGACACGCCCAAGAAC  180
V  92.1% (223/242)  IGHV4-59*01  139  ....................C.....GAG......C........C...................C.......G.A......T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       H  F  S  L  K  L  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  S  K  I  S  S  S  G  V  D  Y 
                    Query_8238   181  CACTTCTCCCTGAAGCTGAGCTCTATGACTGCTGCGGACACGGCCGTGTACTACTGTGCGAGTAAGATATCGAGTAGTGGCGTCGACTAC  270
V  92.1% (223/242)  IGHV4-59*01  229  ..G.....................G....C....................T...........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (8/8)     IGHD3-22*01  14   ------------------------------------------------------------------------........----------  21
J  100.0% (39/39)   IGHJ4*02     9    ------------------------------------------------------------------------------------......  14

                                                                       
                                       W  G  Q  G  T  L  V  T  V  S  S 
                    Query_8238   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  303
J  100.0% (39/39)   IGHJ4*02     15   .................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_246551

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           363     2e-102
IGHD1-26*01                                                                                           21.8    0.044 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GA	GGTGTAGTGGGAGC	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTAC	ARGGVVGAPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	261	29	0	90


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  T  A  G  G  S  F  S  S  Y
                    Query_8239   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGACCGCTGGAGGTAGTTTCAGCAGCTA  90
V  90.0% (261/290)  IGHV1-69*06  6    ..................G...........................................A.G.TT.......C.CC...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  M  R  Q  A  P  G  Q  G  L  E  W  M  G  A  I  M  P  L  Y  G  I  G  N  Y  A  Q
                    Query_8239   91   TGCTATCAGTTGGATGCGACAGGCCCCTGGGCAAGGGCTTGAGTGGATGGGAGCAATCATGCCTCTATATGGCATAGGAAACTACGCACA  180
V  90.0% (261/290)  IGHV1-69*06  96   .........C...G................A......................GG.....C...A.C.T...T.C..C............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  K  V  T  I  T  A  D  T  S  T  R  T  A  Y  M  E  L  S  G  L  R  S  A  D  T  A
                    Query_8239   181  GAAGTTCCAGGGCAAAGTCACGATTACCGCGGACACATCCACGAGGACAGCCTACATGGAGTTGAGTGGCCTGAGATCTGCGGACACGGC  270
V  90.0% (261/290)  IGHV1-69*06  186  ..............G....................A.........C...............C....CA............A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  G  G  V  V  G  A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_8239   271  CATGTATTATTGTGCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTACTGGGGCCAGGGAACTCTGGTCACCGTCTCCCCAG  353
V  90.0% (261/290)  IGHV1-69*06  276  .G.......C..........---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  92.9% (13/14)    IGHD1-26*01  1    ----------------------...A..........-----------------------------------------------  14
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------------........................C...............T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_246550

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           344     6e-97
IGHD2-15*01                                                                                           31.5    5e-05
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGAGTTC	TTGTACTGGTGGTAGGTGCTAC	ATGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGAGTTCTTGTACTGGTGGTAGGTGCTACATGTTCTACTACTACGCTGTGGACGTC	AGSSCTGGRCYMFYYYAVDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  V  S  I  S  T  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_8240   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGTCTCCATCAGTACTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  94.7% (233/246)  IGHV4-39*01  49   ...................C...........G.........C.G..G..........................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  S  I  Y  H  S  G  S  A  F  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  T  S 
                    Query_8240   91   CTGGAGTGGATGGGGAGTATCTATCATAGTGGGAGCGCCTTCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  94.7% (233/246)  IGHV4-39*01  139  ...........T............T...........A...A................A................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  I  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  C  T  G  G  R 
                    Query_8240   181  AAGAACCAGTTCTCCCTGAAGCTGATCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGGGGAGTTCTTGTACTGGTGGTAGG  270
V  94.7% (233/246)  IGHV4-39*01  229  .........................G........................................------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.9% (20/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G.........C  22

                                      DR3-IMGT------------------------>                                 
                                       C  Y  M  F  Y  Y  Y  A  V  D  V  W  G  Q  G  T  T  I  T  V  S  S 
                    Query_8240   271  TGCTACATGTTCTACTACTACGCTGTGGACGTCTGGGGCCAAGGGACCACGATCACCGTCTCCTCA  336
D  90.9% (20/22)    IGHD2-15*01  23   ......------------------------------------------------------------  28
J  94.5% (52/55)    IGHJ6*02     8    -----------...........G.A..........................G..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_246553

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            339     2e-95
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTCCGGAG	GTGGGAGCTACT	CGTGGTCCTTTTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCGGAGGTGGGAGCTACTCGTGGTCCTTTTCCTAC	ARGSGGGSYSWSFSY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8241   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATACCTTGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  93.6% (233/249)  IGHV3-9*01   47   ..................................................G..A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  S  W  N  G  G  L  K  V  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8241   91   AGTGGGTCGCAGGTATTAGTTGGAATGGTGGTCTCAAGGTCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.6% (233/249)  IGHV3-9*01   137  ........T.................A.....AG..TA.G..................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  G  S  G  G  G  S  Y  
                    Query_8241   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTTCTGTGCGAGAGGGTCCGGAGGTGGGAGCTACT  270
V  93.6% (233/249)  IGHV3-9*01   227  .....................................T...........CT.G....A......A.A..---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD1-26*01  7    ------------------------------------------------------------------------------............  18

                                      ---------------->                                  
                                      S  W  S  F  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8241   271  CGTGGTCCTTTTCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (38/38)   IGHJ4*02     11   -------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_213569

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           299     2e-83
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GGGCCAGAGA	AGTAGGACC	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGAGGGCCAGAGAAGTAGGACCCTTGACTAC	ATEGQRSRTLDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	247	219	28	0	88.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  N  Y  M  S  W  V  R  Q  A  P  G  M  G  L  
                    Query_8242   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAATAACTATATGAGTTGGGTCCGCCAGGCTCCAGGGATGGGGCTGG  90
V  88.7% (219/247)  IGHV3-53*01  47   ...............................G......G......GC.....C.....C......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  I  Y  S  G  G  G  S  F  Y  T  H  S  V  E  G  R  F  T  I  S  R  D  D  Y  K  
                    Query_8242   91   AGTGGGTCTCTCTTATTTACAGCGGTGGTGGCTCCTTCTACACACACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACGATTACAAGA  180
V  88.7% (219/247)  IGHV3-53*01  137  ..........AG.......T.........A..A.A.A....G..G........A..........................A...C.....  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  T  V  Y  L  Q  M  N  N  V  R  A  E  D  T  A  I  Y  Y  C  A  T  E  G  Q  R  S  R  T  L  
                    Query_8242   181  ACACGGTTTATCTTCAAATGAACAATGTTAGAGCCGAGGACACGGCCATATATTACTGTGCGACAGAGGGCCAGAGAAGTAGGACCCTTG  270
V  88.7% (219/247)  IGHV3-53*01  227  .....C.G................GCC.G..................G.G.............G...-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  88.9% (8/9)      IGHD2-2*01   11   -----------------------------------------------------------------------------.....T...----  19
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_8242   271  ACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  309
J  97.6% (41/42)    IGHJ4*02     10   ...........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_246555

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           353     9e-100
IGHD3-16*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAATC	TTGGGGGAG	CCGACCAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAATCTTGGGGGAGCCGACCAGATTGACTAC	ARVNLGGADQIDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  H  Y  W  S  W  M  R  Q  P  P  G  K  G 
                    Query_8243   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGGTAGTCACTACTGGAGCTGGATGCGGCAGCCCCCAGGGAAGGGA  90
V  95.2% (238/250)  IGHV4-61*01  49   .........................................C.........T................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  N  Y  E  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_8243   91   CTGGAGTGGATTGGGAATATCTATTATAGTGGGAGCACCAACTACGAACCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCC  180
V  95.2% (238/250)  IGHV4-61*01  139  ...............T..........C..................A.C..............................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  N  S  L  T  A  A  D  T  A  V  Y  F  C  A  R  V  N  L  G  G  A  D 
                    Query_8243   181  AAGAACCAGTTCTCCCTGAAACTGAACTCTTTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGTTAATCTTGGGGGAGCCGAC  270
V  95.2% (238/250)  IGHV4-61*01  229  ....................G....G....G...........................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  16   ----------------------------------------------------------------------------.........-----  24

                                      ----------->                                  
                                       Q  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8243   271  CAGATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (42/42)   IGHJ4*02     7    ----..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_246554

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           338     5e-95
IGHD2-2*01                                                                                            21.8    0.044
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCGA	CCGAGAAATTGAAGTGAA	ACCAGCTGCTGTGC	GGC	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCGCCGACCGAGAAATTGAAGTGAAACCAGCTGCTGTGCGGCACTATTTCTCCGTTATGGACGTC	TADREIEVKPAAVRHYFSVMDV	249	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	256	8	6	2	0	75
Total	N/A	N/A	256	236	20	0	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  K  A  W  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8244   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCATTTTCAGTAAGGCCTGGCTGAGCTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  92.2% (236/256)  IGHV3-15*01  47   .......T....................T.......C.........C......A...................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  S  D  S  E  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_8244   91   AGTGGGTTGGCCGTATTAAAAGTAAAAGTGATAGCGAGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGACG  180
V  92.2% (236/256)  IGHV3-15*01  137  ......................C....C....G.T.G...................................................T.  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  N  T  L  Y  L  Q  M  S  S  L  T  T  E  D  T  A  V  Y  Y  C  T  A  D  R  E  I  E  
                    Query_8244   181  ATTCAAAAAACACACTGTATCTGCAAATGAGTAGCCTGACAACCGAGGACACAGCCGTATATTATTGTACCGCCGACCGAGAAATTGAAG  270
V  92.2% (236/256)  IGHV3-15*01  227  .............G................AC.......A..................G.....C......A.A..--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 

                                      -------CDR3-IMGT--------------------------->                                 
                                      V  K  P  A  A  V  R  H  Y  F  S  V  M  D  V  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_8244   271  TGAAACCAGCTGCTGTGCGGCACTATTTCTCCGTTATGGACGTCTGGGGCCAAGGGACTATGGTCACCGTCTCCTCA  347
D  92.9% (13/14)    IGHD2-2*01   17   ----..........A...-----------------------------------------------------------  30
J  89.3% (50/56)    IGHJ6*02     7    ---------------------....C.A..A..G........................C.C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_246557

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD3-16*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	TGGGGGA	TGGCGACAATTCTGACATTTCG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTC	TRVGDGDNSDISYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  I  F
                    Query_8245   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTTAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTAGCATCTT  90
V  95.2% (275/289)  IGHV5-51*01  6    ...........................G.................................................G.....C..G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  I  K  Y  S  P
                    Query_8245   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATATCAAATACAGTCC  180
V  95.2% (275/289)  IGHV5-51*01  96   ....................................................A........................C..G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8245   181  GTCCTTCCAAGGCCAGGTCTCCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTTTGAAGGCCTCGGACACCGC  270
V  95.2% (275/289)  IGHV5-51*01  186  ...................A.................................................CC...................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  T  R  V  G  D  G  D  N  S  D  I  S  Y  G  M  D  V  W  G  Q  G  T  K  V  T  V
                    Query_8245   271  CATCTATTACTGTACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTCTGGGGCCAAGGGACCAAGGTCACCGT  360
V  95.2% (275/289)  IGHV5-51*01  276  ...G.........G.....-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-16*01  17   --------------------.......---------------------------------------------------------------  23
J  95.8% (46/48)    IGHJ6*02     15   -------------------------------------------------.....T.........................C.........  55

                                             
                                        S  S 
                    Query_8245   361  CTCCTCA  367
J  95.8% (46/48)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_246556

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           410     1e-116
IGHD1-20*01                                                                                           29.5    2e-04 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-20*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGAAAA	TATAACTGGAACGAC	GGAAT	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATC	ARVGKYNWNDGIAFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N  S  F
                    Query_8246   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAACAGCTT  90
V  95.2% (276/290)  IGHV1-69*01  6    ..................G.......................C........................................G.....A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  N  W  V  R  Q  A  P  G  H  G  P  E  W  M  G  G  I  I  P  I  F  G  T  T  K  Y  A  Q
                    Query_8246   91   TGCTGTCAACTGGGTGCGACAGGCCCCTGGACATGGGCCTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAACAAAATACGCACA  180
V  95.2% (276/290)  IGHV1-69*01  96   ....A...G........................A....T.....................................G....C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_8246   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGGACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.2% (276/290)  IGHV1-69*01  186  .............................................C....C.......................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  V  G  K  Y  N  W  N  D  G  I  A  F  D  I  W  G  Q  G  T  I  V  T  V  S
                    Query_8246   271  CGTTTATTATTGTGCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATCTGGGGCCAAGGGACAATAGTCACCGTCTC  360
V  95.2% (276/290)  IGHV1-69*01  276  ...G.....C..........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (15/15)   IGHD1-20*01  3    ----------------------------...............-----------------------------------------------  17
J  95.7% (45/47)    IGHJ3*02     4    ------------------------------------------------...T..........................G...........  45

                                           
                                        S  
                    Query_8246   361  TTCAG  365
J  95.7% (45/47)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_340864

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATG	GTATTATTCTGATAACAGTGGTTATT	T	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATGGTATTATTCTGATAACAGTGGTTATTTCTTTGACTCC	AREWYYSDNSGYFFDS	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_8247   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGCCAGTCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...........................................G.....................G...C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  V  Y  Y  T  G  F  T  D  Y  N  P  S  L  K  S  R  I  T  I  S  L  D  T  S  K  N 
                    Query_8247   91   TGGCTTGGGTTTGTCTATTACACTGGATTCACCGACTACAACCCCTCCCTCAAGAGTCGAATCACCATATCACTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ...A......A.A.........G...GAG....A..........................G...........G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  W  Y  Y  S  D  N  S  G 
                    Query_8247   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGAATGGTATTATTCTGATAACAGTGGT  270
V  93.5% (229/245)  IGHV4-59*01  229  .............A.................................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (22/26)    IGHD3-22*01  1    --------------------------------------------------------------------......C.A.....GT......  22

                                      -------------->                                  
                                       Y  F  F  D  S  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_8247   271  TATTTCTTTGACTCCTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  319
D  84.6% (22/26)    IGHD3-22*01  23   ....---------------------------------------------  26
J  95.5% (42/44)    IGHJ4*02     5    -----........A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_340865

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           279     3e-77
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	216	28	6	86.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_8248   4    CCCTGAGACTCTCCTGTGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.4% (216/250)  IGHV4-34*01  50   .....TCC...A....C.....C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_8248   94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.4% (216/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_8248   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.4% (216/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_8248   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_109588

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           425     3e-121
IGHD6-13*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TTATCGT	TATGGCAGCAGGTGGT	TACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTATCGTTATGGCAGCAGGTGGTTACCACTTTGACTTC	AKLIVMAAGGYHFDF	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	281	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  A  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  T  Y
                    Query_8249   1    GCAGCTGGTGCAGTCTGGGGCAGAGGCGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCACCTA  90
V  96.9% (281/290)  IGHV5-51*01  6    ..................A.......T..................................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  F  D  T  R  Y  S  P
                    Query_8249   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTTTGATACCAGATATAGCCC  180
V  96.9% (281/290)  IGHV5-51*01  96   .......................................................................C............C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8249   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (281/290)  IGHV5-51*01  186  .....................................................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  A  K  L  I  V  M  A  A  G  G  Y  H  F  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8249   271  CATCTATTACTGTGCGAAACTTATCGTTATGGCAGCAGGTGGTTACCACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  96.9% (281/290)  IGHV5-51*01  276  ...G.............G..----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  87.5% (14/16)    IGHD6-13*01  4    ---------------------------...A.......C....-----------------------------------------------  19
J  97.8% (44/45)    IGHJ4*02     4    -----------------------------------------------.........A.................................  46

                                        
                                        
                    Query_8249   361  AG  362
J  97.8% (44/45)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_340867

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           410     1e-116
IGHD1-20*01                                                                                           18.0    0.61  
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GATAC	CC	GGTATAACGGGA	TCT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGATACCCGGTATAACGGGATCTTTTGCCTGC	ARIPGITGSFAC	263	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	29	1	0	96.7
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	110	4	0	96.5
CDR3-IMGT (germline)	263	272	10	10	0	0	100
Total	N/A	N/A	272	267	5	0	98.2


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  G  V  S  W  I  R
                    Query_8250   1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAATGGGTGTGAGCTGGATCCG  90
V  98.2% (267/272)  IGHV2-70*01  30   .........................................................................T................  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  P  S  L  K  T  R  L  T
                    Query_8250   91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACTCATTGATTGGGATGATGATAAATACTACAGCCCATCTCTGAAGACCAGGCTCAC  180
V  98.2% (267/272)  IGHV2-70*01  120  ...................................................................A......................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  P  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  S  Y  S  C  A  R  I
                    Query_8250   181  CATCCCCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCTCGTATTCCTGTGCACGGAT  270
V  98.2% (267/272)  IGHV2-70*01  210  ....T.................................................................A......A............  299
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  I

                                      ------CDR3-IMGT------------>                                  
                                        P  G  I  T  G  S  F  A  C  W  G  Q  A  T  L  V  T  V  S  P  
                    Query_8250   271  ACCCGGTATAACGGGATCTTTTGCCTGCTGGGGCCAGGCAACCCTGGTCACCGTCTCCCCAG  332
V  98.2% (267/272)  IGHV2-70*01  300  ..------------------------------------------------------------  301
                                                                                                    
D  91.7% (11/12)    IGHD1-20*01  1    ----........T...----------------------------------------------  12
J  90.7% (39/43)    IGHJ4*02     6    -------------------....A..A...........G...................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_340860

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           322     2e-90
IGHD3-22*01                                                                                           21.8    0.040
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTAGAAGAGG	ATTACTATGACACTAGT	T	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTAGAAGAGGATTACTATGACACTAGTTATGCTCTTGATATC	ARDLEEDYYDTSYALDI	230	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	110	4	0	96.5
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	215	9	0	96


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  R  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  S 
                    Query_8251   14   TCTGGATTCACCTTCAGAAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGGAGTGGGTCTCATCCATCAGTAGTAGT  103
V  96.0% (215/224)  IGHV3-21*01  73   .................T..C......................................G....................T.........  162
                                       S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       S  N  Y  I  Y  D  T  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  S 
                    Query_8251   104  AGTAATTACATATACGACACAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAGC  193
V  96.0% (215/224)  IGHV3-21*01  163  ....G..........T..G.....................................................................A.  252
                                       S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><--------------------CDR3-IMGT-------------------->   
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  E  E  D  Y  Y  D  T  S  Y  A  L  D  I  W 
                    Query_8251   194  AGCCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGAGATCTAGAAGAGGATTACTATGACACTAGTTATGCTCTTGATATCTGG  283
V  96.0% (215/224)  IGHV3-21*01  253  ................................C...........----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  88.2% (15/17)    IGHD3-22*01  3    -------------------------------------------------------..........T.G....------------------  19
J  95.8% (46/48)    IGHJ3*02     3    -------------------------------------------------------------------------.....T...........  19

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_8251   284  GGCCAAGGGACACTGGTCACCGTCTCTTCAG  314
J  95.8% (46/48)    IGHJ3*02     20   ............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_340862

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           380     1e-107
IGHD3-16*01                                                                                           14.1    9.3   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACAAGCGGGCGGCCCC	TTTGGGG	CGAGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACAAGCGGGCGGCCCCTTTGGGGCGAGCGACTAC	ARGQAGGPFGASDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  S  F  N  D  Y 
                    Query_8252   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAATGAAGGTCTCCTGCAAGGCTTCCGGTTACAGCTTTAACGACTAT  91
V  92.0% (266/289)  IGHV1-18*01  7    .............................................G......................T.......C.....C.AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  M  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  A  Y  N  G  N  T  K  Y  S  E 
                    Query_8252   92   GGTATCACTTGGATGCGACAGGCCCCTGGACAGGGGCCTGAGTGGATGGGATGGATCAGCGCATATAATGGTAACACAAAGTATTCAGAG  181
V  92.0% (266/289)  IGHV1-18*01  97   .......GC...G...................A....T........................T..C..............C...G..C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  L  Q  G  R  L  I  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_8252   182  AGGCTCCAGGGCAGACTCATCATGACCACAGACACATCCACGAGCACAGCCTACATGGAATTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.0% (266/289)  IGHV1-18*01  187  .A.............G...C.......................................GC.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  G  Q  A  G  G  P  F  G  A  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8252   272  GTCTATTATTGTGCGAGAGGACAAGCGGGCGGCCCCTTTGGGGCGAGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  92.0% (266/289)  IGHV1-18*01  277  ..G.....C..........---------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD3-16*01  15   ------------------------------------.......---------------------------------------------  21
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_340863

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_8253  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01  49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_8253  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01  139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_8253  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01  229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01  13   ----------------------------------------------------------------------.....C..G...--------  24

                                     ----------->                                  
                                      G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_8253  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02    6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_109582

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           357     1e-100
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTTTGTGG	TACTCTGGTTCGGGGAGT	AGAACCCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTTGTGGTACTCTGGTTCGGGGAGTAGAACCCGTTTTGACTAC	ARALWYSGSGSRTRFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_8254   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGTCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATTCGCCAGCACCCAGGGAAGGGC  90
V  95.6% (239/250)  IGHV4-31*03  49   .............................T.G.............................G......C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  T  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_8254   91   CTGGAGTGGATTGGATACATCTATTACAGTGGGAGCACCTACTACACCCCGTCCCTCAAGAGTCGAGTTTCCATTTCAGTCGACACGTCT  180
V  95.6% (239/250)  IGHV4-31*03  139  ..............G...............................A......................A....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  L  W  Y  S  G  S 
                    Query_8254   181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTATTGTGCGAGAGCTTTGTGGTACTCTGGTTCG  270
V  95.6% (239/250)  IGHV4-31*03  229  .........................G.................................C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  5    ------------------------------------------------------------------------------....A.......  16

                                      MGT-------------------->                                  
                                       G  S  R  T  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8254   271  GGGAGTAGAACCCGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  94.4% (17/18)    IGHD3-10*01  17   ......----------------------------------------------------  22
J  100.0% (43/43)   IGHJ4*02     6    ---------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_109583

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           350     9e-99
IGHD3-16*01                                                                                           18.0    0.65 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	285	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	70	5	0	93.3
CDR1-IMGT	78	101	24	17	7	0	70.8
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	284	114	95	13	6	83.3
CDR3-IMGT (germline)	285	290	6	6	0	0	100
Total	N/A	N/A	294	261	27	6	88.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P 
                    Query_8255   3    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCC  92
V  88.8% (261/294)  IGHV5-51*03  1    .....G........G.............................................T.....A....T..........GC..TA..  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y 
                    Query_8255   93   CGTTATTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATAC  182
V  88.8% (261/294)  IGHV5-51*03  91   A.C..C........C.......................................................G...................  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D 
                    Query_8255   183  AGTCCGGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGAC  266
V  88.8% (261/294)  IGHV5-51*03  181  ..C...T.....C.A...................C...C........CAGCACC.C...............C..C...............  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S 
                    Query_8255   267  ACTGCCATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCT  356
V  88.8% (261/294)  IGHV5-51*03  271  ..C.....G........T......------------------------------------------------------------------  294
                                       T  A  M  Y  Y  C  A  R                                                                   
D  91.7% (11/12)    IGHD3-16*01  18   -------------------------........T...-----------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    --------------------------------------------......T......G.................A..............  46

                                          
                                       S  
                    Query_8255   357  TCAG  360
J  94.0% (47/50)    IGHJ3*01     47   ....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_109581

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD4-17*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTCGAGCGG	CTACGGTGGCTAC	GACTCTTCTATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAGTCGAGCGGCTACGGTGGCTACGACTCTTCTATTTTTGACTAC	VRESSGYGGYDSSIFDY	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  R  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8256   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGTCGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   ..................A.......................A...............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  T  G  N  T  K  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  P  S  K  H 
                    Query_8256   91   TGGATTGGGTATGTCTATTACACTGGCAACACCAAGTACAGCCCCTCCCTCAAAAGTCGAGTCACCATATCAGTAGACCCGTCCAAGCAC  180
V  92.2% (226/245)  IGHV4-59*01  139  ............A.........G...G.G......C....A............G........................A........A..  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  N  L  Y  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  E  S  S  G  Y  G  G  Y  D 
                    Query_8256   181  CAGTTCTCCCTCAACCTGTACTCTGTCACCGCTGCGGACACGGCCGTGTACTATTGTGTGAGAGAGTCGAGCGGCTACGGTGGCTACGAC  270
V  92.2% (226/245)  IGHV4-59*01  229  ...........G..G...AG......G.......................T..C....C......-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.3% (12/13)    IGHD4-17*01  4    --------------------------------------------------------------------------........A....---  16

                                      ----------------->                                  
                                       S  S  I  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8256   271  TCTTCTATTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  100.0% (43/43)   IGHJ4*02     6    ---------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_109586

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           388     5e-110
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCCCATTTCACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCCCATTTCACAGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	267	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_8257   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  93.4% (267/286)  IGHV5-51*01  6    ..............................A...................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  Q  G  L  E  L  M  G  L  I  Y  P  G  D  S  D  T  W  Y  S  P
                    Query_8257   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCAAGGCCTGGAGTTGATGGGGCTCATCTATCCTGGTGACTCTGATACCTGGTACAGTCC  180
V  93.4% (267/286)  IGHV5-51*01  96   ......................A........A............G.......A..........................A.A.....C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  A  T  S  A  Y  L  Q  W  T  T  L  K  A  S  D  T  A
                    Query_8257   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGCCACCTCCGCCTACCTGCAGTGGACCACCCTGAAGGCCTCGGACACCGC  270
V  93.4% (267/286)  IGHV5-51*01  186  ....................C...................AT..G.A..................G..G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8257   271  CATTTACTACTGTGCGGCCCTTATCGCAGCCTCCCATTTCACAGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  353
V  93.4% (267/286)  IGHV5-51*01  276  ...G..T.........-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------.................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_109587

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           357     1e-100
IGHD6-13*01                                                                                           21.8    0.041 
IGHJ3*01                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  L  S  G  G  S  I  S  S  G  G  F  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_8258   1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGGCTCCATCAGCAGTGGTGGTTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.6% (239/250)  IGHV4-31*03  49   .....................G..............................A........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_8258   91   CTGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCT  180
V  95.6% (239/250)  IGHV4-31*03  139  .....................T..................A.................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V 
                    Query_8258   181  AAGAACCAATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTA  270
V  95.6% (239/250)  IGHV4-31*03  229  ........G..........A.....GC...............................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD6-13*01  11   ------------------------------------------------------------------------...........-------  21

                                      ----------------->                                  
                                       G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8258   271  GGCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  98.0% (48/49)    IGHJ3*01     2    ---.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_25511

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           427     9e-122
IGHD1-26*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCG	AGTGGGAGCTACT	TGGGGCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTAC	ARDLEWELLGAFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	282	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  R  Y
                    Query_8259   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGATA  90
V  96.9% (282/291)  IGHV1-69*06  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  S  F  G  T  A  H  Y  A  Q
                    Query_8259   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTAGCTTTGGAACAGCACACTACGCACA  180
V  96.9% (282/291)  IGHV1-69*06  96   .................................................................T......T......A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  R  S  T  S  T  A  Y  M  E  L  S  S  L  S  S  E  D  T  A
                    Query_8259   181  GAGATTCCAGGGCAGAGTCACGATTACCGCGGACAGATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGCTCTGAGGACACGGC  270
V  96.9% (282/291)  IGHV1-69*06  186  ..AG...............................A.......................................A..............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  D  L  E  W  E  L  L  G  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8259   271  CGTGTATTACTGTGCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  96.9% (282/291)  IGHV1-69*06  276  .....................--------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                       
D  100.0% (13/13)   IGHD1-26*01  6    --------------------------.............--------------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     6    ----------------------------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_109585

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           347     7e-98
IGHD3-3*01                                                                                            10.3    123  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTCTTC	TTTTT	CTCCAAGAGAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTCTTCTTTTTCTCCAAGAGAGAGTCTACTACTTTGACTAC	ARSLLFLQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  K  S  G  G  Y  Y  W  S  W  V  R  Q  H  P  G  K  G 
                    Query_8260   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAAGAGTGGTGGCTACTACTGGAGCTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (235/248)  IGHV4-31*03  49   ..................................C.....GC........T...............A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  A  T  S 
                    Query_8260   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGCCACGTCT  180
V  94.8% (235/248)  IGHV4-31*03  139  ..................................G.............C......................C........A.A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  S  L  L  F  L  Q  E 
                    Query_8260   181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACTGTCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTCTTCTTTTTCTCCAAGAG  270
V  94.8% (235/248)  IGHV4-31*03  229  .....................C....C..........C..............................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD3-3*01   10   ----------------------------------------------------------------------------.....---------  14

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8260   271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_45036

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ2*01                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	TACTATAATCCTAGTGGTTATTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACTATAATCCTAGTGGTTATTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGYYGYWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	239	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_8261   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.6% (239/245)  IGHV4-59*01  49   ............................................................A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  I  S  K  N 
                    Query_8261   91   TGGATTGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGATATCTCCAAGAAC  180
V  97.6% (239/245)  IGHV4-59*01  139  ........G....................................................................C.CG.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  Y  Y 
                    Query_8261   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACTACTATAATCCTAGTGGTTATTAC  270
V  97.6% (239/245)  IGHV4-59*01  229  ...................G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (21/24)    IGHD3-22*01  5    ------------------------------------------------------------------......G..AG.............  28

                                      -------------------->                                  
                                       G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8261   271  GGGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  325
J  100.0% (52/52)   IGHJ2*01     2    ---....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_45037

Length=413
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	CTGCGCGG	GATAGTCGTGGTTATCACTAC	GGCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGCGCGGGATAGTCGTGGTTATCACTACGGCCTCTACTTTGACTAC	ARPARDSRGYHYGLYFDY	301	354	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	87	83	69	2	12	83.1
CDR1-IMGT	88	111	24	22	2	0	91.7
FR2-IMGT	112	162	51	48	3	0	94.1
CDR2-IMGT	163	186	24	24	0	0	100
FR3-IMGT	187	300	114	114	0	0	100
CDR3-IMGT (germline)	301	307	7	7	0	0	100
Total	N/A	N/A	303	284	7	12	93.7


Alignments

                                      <------------------------------------FR1-IMGT-------------------------------------><------
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  F  L  R  I  S  C  K  G  S  G  Y  G  S  G  Y  
                    Query_8262   5    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTTTCTGAGGATCTCCTGTAAGGGTTCTGGATACGGTTCTGGATACA  94
V  93.7% (284/303)  IGHV5-51*01  5    .............................................C.....A.................------------.........  82
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G              S  G  Y  

                                      -CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT-----
                                      S  F  T  S  Y  W  I  G  W  A  R  Q  M  P  G  K  G  L  E  W  I  G  V  I  Y  P  G  D  S  D  
                    Query_8262   95   GCTTTACCAGTTATTGGATCGGCTGGGCGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATAGGGGTCATCTATCCTGGTGACTCTGATA  184
V  93.7% (284/303)  IGHV5-51*01  83   ..........C..C.............T.................................G...A........................  172
                                      S  F  T  S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  

                                      -><----------------------------------------------------FR3-IMGT---------------------------
                                      T  R  Y  S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  
                    Query_8262   185  CCAGATACAGCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGG  274
V  93.7% (284/303)  IGHV5-51*01  173  ..........................................................................................  262
                                      T  R  Y  S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  

                                      -------------------------><----------------------CDR3-IMGT--------------------->          
                                      A  S  D  T  A  M  Y  Y  C  A  R  P  A  R  D  S  R  G  Y  H  Y  G  L  Y  F  D  Y  W  G  Q  
                    Query_8262   275  CCTCGGACACCGCCATGTATTACTGTGCGAGACCTGCGCGGGATAGTCGTGGTTATCACTACGGCCTCTACTTTGACTACTGGGGCCAGG  364
V  93.7% (284/303)  IGHV5-51*01  263  .................................---------------------------------------------------------  295
                                      A  S  D  T  A  M  Y  Y  C  A  R                                                           
D  90.5% (19/21)    IGHD3-22*01  11   -----------------------------------------......A........T.....----------------------------  31
J  100.0% (47/47)   IGHJ4*02     2    -------------------------------------------------------------------.......................  24

                                                              
                                      G  T  L  V  T  V  S  S  
                    Query_8262   365  GAACCCTGGTCACCGTCTCCTCAG  388
J  100.0% (47/47)   IGHJ4*02     25   ........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40498920


Query= Query_21524

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD3-22*01                                                                                           18.0    0.61 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGAAA	TATGACTATGAT	CTTGGAGACGTGGGTCTCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGAAATATGACTATGATCTTGGAGACGTGGGTCTCCACAACTTTGACTCC	ARAPKYDYDLGDVGLHNFDS	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  F  L  T  C  T  V  S  G  G  S  M  S  N  Y  F  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_8263   1    ACCCTGTTCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTAATTACTTCTGGAGCTGGATTCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .......C..............................C....G.....A............C..................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  L  T  E  Y  N  P  S  L  K  S  R  V  S  I  S  I  D  T  P  K  N 
                    Query_8263   91   TGGATTGGGTATATCTATTATAGTGGACTCACCGAGTACAACCCGTCCCTCAAGAGTCGAGTCAGCATATCAATTGACACGCCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ....................C.....GAG....A.C........C...................C.......G.A......T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       H  F  S  L  K  V  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  A  P  K  Y  D  Y  D  L  G 
                    Query_8263   181  CACTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCATTTATTACTGTGCGAGAGCCCCGAAATATGACTATGATCTTGGA  270
V  91.4% (223/244)  IGHV4-59*01  229  ..G............C.............................G.G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-22*01  2    ------------------------------------------------------------------------...T........------  13

                                      GT------------------------>                                  
                                       D  V  G  L  H  N  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8263   271  GACGTGGGTCTCCACAACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  97.8% (44/45)    IGHJ4*02     4    ----------------.........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_345984

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            302     3e-84
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCCACGGGCTC	AGCAGTGGC	GATGACTCTGTTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCCACGGGCTCAGCAGTGGCGATGACTCTGTTTATGACTAC	VVHGLSSGDDSVYDY	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	241	1	1	0	0	100
Total	N/A	N/A	241	217	24	0	90


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  R  V  S  G  G  S  I  S  D  S  H  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_8264   1    ACCCTGTCCCTCACCTGCCGTGTCTCTGGTGGCTCCATCAGCGACAGTCACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.0% (217/241)  IGHV4-4*02   49   ..................GC......................AGT...A.........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  F  R  S  G  S  A  K  Y  N  P  S  L  Q  S  R  L  T  M  S  L  D  K  S  R 
                    Query_8264   91   GAGTGGATTGGGGAAGTTTTTCGCAGTGGGAGCGCCAAGTACAACCCGTCCCTTCAGAGTCGACTCACCATGTCACTAGACAAGTCTAGG  180
V  90.0% (217/241)  IGHV4-4*02   139  ...............A.C.A..AT.........A....C..............CA........G.......A...G..........C.A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  K  L  Q  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  H  G  L  S  S  G  D  D 
                    Query_8264   181  AACCAGTTCTCCCTGAAGCTGCAGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGTGGTCCACGGGCTCAGCAGTGGCGATGAC  270
V  90.0% (217/241)  IGHV4-4*02   229  .....................AGC.....................................-----------------------------  289
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  100.0% (9/9)     IGHD6-19*01  7    ---------------------------------------------------------------------------.........------  15

                                      -------------->                                  
                                       S  V  Y  D  Y  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_8264   271  TCTGTTTATGACTACTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  319
J  97.6% (40/41)    IGHJ4*02     8    --------.......................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_345985

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD1-26*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCGA	TATACTGGGAGCTAC	CGAC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCGATATACTGGGAGCTACCGACATGCTTTTGATATC	ARFRYTGSYRHAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	233	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8265   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTATTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  95.9% (233/243)  IGHV4-59*01  49   ...........................................G...C.A.......................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       Y  I  G  Y  I  S  Y  S  G  S  T  D  Y  N  P  S  L  K  S  G  V  T  I  S  L  D  T  S  K  N 
                    Query_8265   91   TATATTGGGTATATCTCTTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTGGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  95.9% (233/243)  IGHV4-59*01  139  .GG.............A................A.......................C..............G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  R  Y  T  G  S  Y  R  H 
                    Query_8265   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATTCCGATATACTGGGAGCTACCGACAT  270
V  95.9% (233/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD1-26*01  3    ---------------------------------------------------------------------....G..........------  17
J  97.8% (44/45)    IGHJ3*02     3    ----------------------------------------------------------------------------------------..  4

                                      ----------->                               
                                       A  F  D  I  W  S  Q  G  T  M  V  T  V  S  
                    Query_8265   271  GCTTTTGATATCTGGAGCCAAGGGACAATGGTCACCGTCTCTT  313
J  97.8% (44/45)    IGHJ3*02     5    ...............G...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_345986

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD1-26*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TTCCCGTCATC	AGTGGGAGC	CGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTCCCGTCATCAGTGGGAGCCGCGACTAC	AKLPVISGSRDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8266   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTCCTACTGGAGTTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  92.2% (225/244)  IGHV4-59*08  49   ...........................................G..A.........C.................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_8266   91   TGGATCGGATATATCTATTCTAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGCGTCACCATCTCGGTAGACACGTCCAAGAAG  180
V  92.2% (225/244)  IGHV4-59*08  139  .....T..G..........AC..............C.......................A........A..A.................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  K  L  P  V  I  S  G  S  R  D 
                    Query_8266   181  CAGTTCTCCCTGAAACTGAATTCTGTGACCGCCGCAGACTCGGCCGTCTATTACTGTGCGAAACTTCCCGTCATCAGTGGGAGCCGCGAC  270
V  92.2% (225/244)  IGHV4-59*08  229  ..............G....GC..................A.......G.............G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD1-26*01  6    ---------------------------------------------------------------------------.........------  14
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_8266   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   ..............................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_345987

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           361     4e-102
IGHD3-16*01                                                                                           12.2    30    
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTTTCC	TGGGGG	N/A	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTCCTGGGGGTGCTTATGATATC	ARHFPGGAYDI	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	238	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  F  C  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8267   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTTCTGCAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (238/245)  IGHV4-59*08  49   ...............................G.................A...G....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8267   91   TGGATTGGGTATATCTCTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  97.1% (238/245)  IGHV4-59*08  139  ................A.........................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  H  F  P  G  G  A  Y  D  I 
                    Query_8267   181  CAGTTCTCCCTGAAGCTGACCTCTGTGTCCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATTTTCCTGGGGGTGCTTATGATATC  270
V  97.1% (238/245)  IGHV4-59*08  229  ...................G.......A.....................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*01  17   -----------------------------------------------------------------------......-------------  22
J  97.9% (46/47)    IGHJ3*02     4    -----------------------------------------------------------------------------.....T.......  16

                                                                        
                                       W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8267   271  TGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  304
J  97.9% (46/47)    IGHJ3*02     17   ..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_345980

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           321     6e-90
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_8268   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_8268   91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  R 
                    Query_8268   181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCCGG  270
V  91.8% (225/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  88.0% (44/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T......T..  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_8268   271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  88.0% (44/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_345981

Length=412
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-24*01                                                                                           419     2e-119
IGHD2-2*02                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-24*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAACA	TCTACCCCGGACACTGG	AGTACTACCAGGTGCTATACC	CGACC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACATCTACCCCGGACACTGGAGTACTACCAGGTGCTATACCCGACCACTACTACCACAGTATGGACGTC	ATSTPDTGVLPGAIPDHYYHSMDV	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	278	10	0	96.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T  E  L 
                    Query_8269   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTA  91
V  96.5% (278/288)  IGHV1-24*01  7    ........A........G........................................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T  E  L 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  V  Y  A  Q 
                    Query_8269   92   TCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAGGATGGTGAAACAGTTTATGCCCAG  181
V  96.5% (278/288)  IGHV1-24*01  97   .................................................................A............A.C..C..A...  186
                                       S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  I  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  E  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  G  D  T  A 
                    Query_8269   182  AAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTATATGGAGCTGAGCAGCCTGAGATCTGGGGACACGGCC  271
V  96.5% (278/288)  IGHV1-24*01  187  .....................................................C.........................A..........  276
                                       K  F  Q  G  R  V  T  M  T  E  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><-------------------------------CDR3-IMGT------------------------------>      
                                       V  Y  Y  C  A  T  S  T  P  D  T  G  V  L  P  G  A  I  P  D  H  Y  Y  H  S  M  D  V  W  G 
                    Query_8269   272  GTCTATTACTGTGCAACATCTACCCCGGACACTGGAGTACTACCAGGTGCTATACCCGACCACTACTACCACAGTATGGACGTCTGGGGC  361
V  96.5% (278/288)  IGHV1-24*01  277  ..G...............------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  T                                                                         
D  90.5% (19/21)    IGHD2-2*02   11   -----------------------------------....G......C.........----------------------------------  31
J  92.9% (52/56)    IGHJ6*02     7    -------------------------------------------------------------........T..G.................  35

                                                                 
                                       Q  G  T  T  V  T  V  S  S 
                    Query_8269   362  CAGGGAACCACGGTCACCGTCTCCTCA  388
J  92.9% (52/56)    IGHJ6*02     36   ..A..G.....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40393728


Query= Query_345982

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	221	24	6	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_8270   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.0% (221/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_8270   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.0% (221/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  G  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_8270   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGGGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.0% (221/251)  IGHV4-34*01  223  ....................GC...........AC........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_8270   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_345983

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         330     1e-92
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGCGTATTATCTTGT	TTCGGGGACTTATTATAA	GGGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCGTATTATCTTGTTTCGGGGACTTATTATAAGGGCGACTAC	ARGAYYLVSGTYYKGDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  L  N  T  F  A  M  H  W  L  R  Q  A  P  G  K  G  L  
                    Query_8271     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTCAATACGTTTGCTATGCACTGGCTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-30-3*01  47   ......................................T...G..GC.A.............G...........................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  L  A  V  T  S  Y  D  E  S  R  N  Y  Y  A  V  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8271     91   AGTGGCTGGCAGTTACATCATATGATGAAAGCAGGAACTACTACGCAGTCTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCC  180
V  92.4% (230/249)  IGHV3-30-3*01  137  .....G.........T...........G.....AT..A..........A...............A........................A  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                        Q  N  T  L  Y  L  Q  M  N  N  L  R  V  D  D  T  A  L  Y  Y  C  A  R  G  A  Y  Y  L  V  S  
                    Query_8271     181  AGAACACGCTGTATCTGCAAATGAACAACCTGAGAGTTGACGACACGGCTCTGTATTACTGTGCGAGAGGGGCGTATTATCTTGTTTCGG  270
V  92.4% (230/249)  IGHV3-30-3*01  227  ...........................G........C...G.........G..................---------------------  295
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD3-10*01    13   -------------------------------------------------------------------------------------.....  17

                                        GT-------------------->                                  
                                        G  T  Y  Y  K  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8271     271  GGACTTATTATAAGGGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  94.4% (17/18)    IGHD3-10*01    18   ...G.........--------------------------------------------  30
J  100.0% (40/40)   IGHJ4*02       9    -----------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_345989

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD3-3*01                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTCCTG	TACGATTTTTGGAATGGT	CAGCAGTACTTTTTCAAGGGTTTA	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCTGTACGATTTTTGGAATGGTCAGCAGTACTTTTTCAAGGGTTTAGACGTC	ARVLYDFWNGQQYFFKGLDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  R  F  A  N  S
                    Query_8272   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGGTTTGCCAACTC  90
V  93.4% (270/289)  IGHV5-51*01  6    ..................................................A...........................C...A...G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  G  P
                    Query_8272   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGAAAAGGCCTGGAGTGGATGGGCGTCATCTACCCTGGTGACTCTGATACCAGATACGGCCC  180
V  93.4% (270/289)  IGHV5-51*01  96   ........G.....................G....................GA.......T........................A....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  G  L  R  A  S  D  T  A
                    Query_8272   181  GTCCTTCCAGGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTATCTTCACTGGAGCGGCCTGAGGGCCTCGGACACCGC  270
V  93.4% (270/289)  IGHV5-51*01  186  .........A..................................G.........C..G..G......A......A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  F  C  A  R  V  L  Y  D  F  W  N  G  Q  Q  Y  F  F  K  G  L  D  V  W  G  Q  G  T  S
                    Query_8272   271  CATGTATTTCTGTGCGAGAGTCCTGTACGATTTTTGGAATGGTCAGCAGTACTTTTTCAAGGGTTTAGACGTCTGGGGCCAAGGGACTTC  360
V  93.4% (270/289)  IGHV5-51*01  276  ........A..........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  94.4% (17/18)    IGHD3-3*01   5    -------------------------.............G....-----------------------------------------------  22
J  94.9% (37/39)    IGHJ6*02     24   -------------------------------------------------------------------....................CA.  46

                                                      
                                        V  T  V  S  S 
                    Query_8272   361  GGTCACCGTCTCCTCA  376
J  94.9% (37/39)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_8188

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         430     1e-122
IGHD6-6*01                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CACAATTCCTC	TATAGCAGCTCGTCC	CCAATTAGCG	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACAATTCCTCTATAGCAGCTCGTCCCCAATTAGCGACTCCTACTACTACAATATGGACGTC	ATQFLYSSSSPISDSYYYNMDV	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	281	6	0	97.9


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_8273     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  97.9% (281/287)  IGHV5-10-1*01  6    .............................................................................G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  D  Y  S  P
                    Query_8273     91   CTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGAATTGATCCTAGTGACTCTTATACCGACTACAGCCC  180
V  97.9% (281/287)  IGHV5-10-1*01  96   ......................................................G........................A..........  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  G  P  A
                    Query_8273     181  GTCCTTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCATCAGCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGGCCCCGC  270
V  97.9% (281/287)  IGHV5-10-1*01  186  ...................................................................................A.A....  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------------------CDR3-IMGT--------------------------->           
                                          M  Y  Y  C  A  T  Q  F  L  Y  S  S  S  S  P  I  S  D  S  Y  Y  Y  N  M  D  V  W  G  Q  G
                    Query_8273     271  CATGTATTACTGTGCGACACAATTCCTCTATAGCAGCTCGTCCCCAATTAGCGACTCCTACTACTACAATATGGACGTCTGGGGCCAAGG  360
V  97.9% (281/287)  IGHV5-10-1*01  276  .................-------------------------------------------------------------------------  292
                                          M  Y  Y  C  A                                                                           
D  100.0% (15/15)   IGHD6-6*01     4    ----------------------------...............-----------------------------------------------  18
J  94.9% (56/59)    IGHJ6*02       4    -----------------------------------------------------...A..........GG.....................  40

                                                              
                                          T  T  V  T  V  S  S 
                    Query_8273     361  GACCACGGTCACCGTCTCCTCA  382
J  94.9% (56/59)    IGHJ6*02       41   ......................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_283575

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           350     9e-99
IGHD2-8*01                                                                                            29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGACA	A	ATATGGAACTAATGGTGTATG	AGGATGAAA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGACAAATATGGAACTAATGGTGTATGAGGATGAAAACTTCTACGGTATGGACGTC	TTNMELMVYEDENFYGMDV	249	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	105	9	0	92.1
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	239	15	0	94.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8274   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAAGGCCTGGATGAGCTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  94.1% (239/254)  IGHV3-15*01  47   .......T......................................C.............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  Q  T  D  G  G  T  T  D  Y  G  T  P  V  K  G  R  F  T  I  S  R  D  
                    Query_8274   91   AGTGGGTTGGCCGTATTAAAAGTCAAACTGATGGTGGGACAACAGACTACGGAACACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  94.1% (239/254)  IGHV3-15*01  137  ......................CA...........................CTG....................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  H  T  V  Y  L  Q  M  S  S  L  K  T  E  D  T  A  L  Y  Y  C  T  T  N  M  E  L  M  
                    Query_8274   181  ATTCAAAACACACGGTGTACCTGCAAATGAGCAGCCTGAAAACCGAGGACACAGCCTTGTATTATTGTACGACAAATATGGAACTAATGG  270
V  94.1% (239/254)  IGHV3-15*01  227  ........A.....C....T..........A.........................G.......C.....C...----------------  300
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  90.5% (19/21)    IGHD2-8*01   4    ---------------------------------------------------------------------------....T.T........  18

                                      --CDR3-IMGT----------------------->                                 
                                      V  Y  E  D  E  N  F  Y  G  M  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_8274   271  TGTATGAGGATGAAAACTTCTACGGTATGGACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  338
D  90.5% (19/21)    IGHD2-8*01   19   ......--------------------------------------------------------------  24
J  96.2% (51/53)    IGHJ6*02     10   ---------------...A.......................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_21525

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           346     2e-97
IGHD3-10*01                                                                                           43.0    2e-08
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_8275   4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  94.4% (235/249)  IGHV4-31*03  50   .....TCC...A.....A...........GG.......A...................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  
                    Query_8275   94   TCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCTA  183
V  94.4% (235/249)  IGHV4-31*03  140  .G...............................G...............................G.............A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G  
                    Query_8275   184  AGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGGA  273
V  94.4% (235/249)  IGHV4-31*03  230  ........................G................................A...........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (22/22)   IGHD3-10*01  7    ----------------------------------------------------------------------------..............  20

                                      ---------------->                                  
                                      S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8275   274  GTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (22/22)   IGHD3-10*01  21   ........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ---------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_283576

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           325     2e-91
IGHD3-3*01                                                                                            35.3    3e-06
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACGATTTTTGGAGTGGTT	GAGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACGATTTTTGGAGTGGTTGAGCATGGACGTG	ARGRFLEWLSMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	23	4	0	85.2
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  N  G  G  S  I  N  T  Y  F  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_8276   1    ACCCTGTCCCTCACCTGCAGTGTCAACGGTGGCTCCATCAATACTTACTTCTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.6% (226/244)  IGHV4-59*01  49   ...................C....TCT.............G..G.....A...................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  S  Y  N  P  S  L  T  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8276   91   TGGATTGGCTATATCTACTACAGTGGGACCACCAGTTACAATCCCTCCCTCACGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  92.6% (226/244)  IGHV4-59*01  139  ........G........T..........G.....AC.....C..........A.....................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  F  L  E  W  L  S  M 
                    Query_8276   181  CAGTTTTCCCTGAAGCTGACCTCTGCGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGACGATTTTTGGAGTGGTTGAGCATG  270
V  92.6% (226/244)  IGHV4-59*01  229  .....C.............G.....T......................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (18/18)   IGHD3-3*01   6    -----------------------------------------------------------------..................-------  23
J  92.9% (39/42)    IGHJ6*02     21   ---------------------------------------------------------------------------------------...  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_8276   271  GACGTGTGGGGCCAAGGGACCACAGTCATCGTCTCCTCA  309
J  92.9% (39/42)    IGHJ6*02     24   .....C.................G....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_79616

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           299     2e-83
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	217	26	0	89.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E  
                    Query_8277   4    CCCTGAGACTCTCCTGTACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAGT  93
V  89.3% (217/243)  IGHV4-59*01  50   .....TCC...A....C...........T..........G.AG.T............................A...A............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N  
                    Query_8277   94   GGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAATG  183
V  89.3% (217/243)  IGHV4-59*01  140  ..A....G...........C..T.....C..C..C.......................A..........................G..CC  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y  
                    Query_8277   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTACT  273
V  89.3% (217/243)  IGHV4-59*01  230  ..............................CT..............G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  94.1% (16/17)    IGHD2-2*01   8    --------------------------------------------------------------------........T........-----  24
J  88.5% (46/52)    IGHJ6*02     11   -------------------------------------------------------------------------------------.....  15

                                      ------------->                                 
                                      Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_8277   274  ACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  320
J  88.5% (46/52)    IGHJ6*02     16   ..GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_79614

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           389     2e-110
IGHD3-9*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	CT	CGATCTTATGATTGGTTATTATAAC	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGACTCGATCTTATGATTGGTTATTATAACCTTGACCAG	ARLDLMIGYYNLDQ	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	63	7	0	90
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  R  P  G  E  S  L  T  I  S  C  V  A  S  G  Y  T  F  S  T  Y
                    Query_8278   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAGGCCGGGGGAGTCTCTGACGATCTCCTGTGTGGCTTCTGGATACACTTTTTCCACCTA  90
V  93.1% (269/289)  IGHV5-51*03  6    ....................C........A..A.................A..........AA..G...........GC...A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  L  M  G  T  I  Y  P  G  D  S  D  T  S  Y  S  P
                    Query_8278   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGTAAAGGCCTGGAGTTGATGGGGACCATCTATCCTGGTGACTCTGATACCAGTTACAGTCC  180
V  93.1% (269/289)  IGHV5-51*03  96   ........G.....................G.............G........T...........................A.....C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8278   181  GTCCTTCCAAGGCCAGGTCACCATTTCAGCCGACAAGTCCATCAGAACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.1% (269/289)  IGHV5-51*03  186  ........................C....................C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  L  D  L  M  I  G  Y  Y  N  L  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8278   271  CATGTATTACTGTGCAAGACTCGATCTTATGATTGGTTATTATAACCTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.1% (269/289)  IGHV5-51*03  276  ...............G...----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  88.0% (22/25)    IGHD3-9*01   7    ---------------------....A..T...C.............-------------------------------------------  31
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------------------.....T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_79613

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-16*02                                                                                           12.2    32   
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGT	TCGTTA	CCCAATCTTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTTCGTTACCCAATCTTGGCTACTACTACGGTATGGACGTC	ARDRSLPNLGYYYGMDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  M  G  L  E 
                    Query_8279   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGATGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...............................G.........T...........................C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  Y  S  G  T  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_8279   91   TGGATTGGGCATATCTATTACAGTGGGACCACCAGTTACAATCCTTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAT  180
V  93.5% (229/245)  IGHV4-59*01  139  .........T..................G.....AC.....C..C...........................G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  S  L  P  N  L  G  Y 
                    Query_8279   181  CAGTTCTCCCTGAAGCTGAATTCCGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATCGTTCGTTACCCAATCTTGGCTAC  270
V  93.5% (229/245)  IGHV4-59*01  229  ...................GC..T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*02  28   ---------------------------------------------------------------------......---------------  33
J  96.4% (53/55)    IGHJ6*02     8    --------------------------------------------------------------------------------------....  11

                                      ----------------->                                 
                                       Y  Y  G  M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_8279   271  TACTACGGTATGGACGTCTGGGGCCAAGGGGCCACCGTCACCGTCTCCTCA  321
J  96.4% (53/55)    IGHJ6*02     12   ..............................A....G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_79612

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	274	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_8280   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  95.1% (274/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_8280   91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  95.1% (274/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_8280   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  95.1% (274/288)  IGHV5-51*01  186  ...............G.........................T.........................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8280   271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  95.1% (274/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_79611

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           18.0    0.66 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	44	7	0	86.3
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	241	27	6	88


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_8281   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.0% (241/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  R  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_8281   91   GCCGCCAGCGACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.0% (241/274)  IGHV4-34*01  110  T........CC...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_8281   181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.0% (241/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_8281   271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.0% (241/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_79610

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD1-1*01                                                                                            14.1    9.2   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAGGGGG	CAACTGG	GACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTAC	ARGGGNWDPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	270	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  Y
                    Query_8282   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCTA  90
V  93.8% (270/288)  IGHV5-51*01  6    .................................................................G............C......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  V  V  Y  P  D  D  S  D  A  R  Y  S  P
                    Query_8282   91   CTGGATCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGGTCGTCTATCCTGATGACTCTGATGCCAGATACAGCCC  180
V  93.8% (270/288)  IGHV5-51*01  96   ..................C..G.........A..........G.........A..A.........G..........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  I  T  I  S  A  D  K  S  I  S  T  A  F  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_8282   181  GTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACACCGC  270
V  93.8% (270/288)  IGHV5-51*01  186  .......C.......GG....................................A...........G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  G  N  W  D  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8282   271  CATCTATTACTGTGCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.8% (270/288)  IGHV5-51*01  276  ...G..............-----------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------.......-------------------------------------------------  11
J  100.0% (44/44)   IGHJ4*02     5    ---------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_79619

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD3-9*01                                                                                            25.7    0.003
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGACCTACTACCTTC	TTTTGTCTGGTTATTA	ACATTTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGACCTACTACCTTCTTTTGTCTGGTTATTAACATTTTATGACTTC	ARADLLPSFVWLLTFYDF	261	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	18	6	0	75
FR2-IMGT	75	125	51	47	4	0	92.2
CDR2-IMGT	126	146	21	18	3	0	85.7
FR3-IMGT	147	260	114	100	14	0	87.7
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	237	30	0	88.8


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  T  F  T  G  Y  F  W  T  W  I  S  
                    Query_8283   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACTTGCGCTGTCTATGGGGGGACCTTTACTGGTTATTTCTGGACCTGGATCAGCC  90
V  88.8% (237/267)  IGHV4-34*01  26   ........T.......T....................C..............T...T....C.G......C.A.....G.......C...  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  N  G  E  I  S  H  S  G  S  T  N  Y  S  R  T  P  K  S  R  V  T  
                    Query_8283   91   AGCCCCCAGGGAAGGGCCTGGAGTGGAATGGGGAAATCAGTCATAGTGGATCCACCAACTACAGCCGGACCCCCAAGAGTCGAGTCACCC  180
V  88.8% (237/267)  IGHV4-34*01  116  ................G..........T...........A..........AG...........A..C.T...T................A  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      L  S  V  D  T  S  K  N  Q  I  S  L  T  L  T  S  V  T  A  P  D  T  V  V  Y  Y  C  A  R  A  
                    Query_8283   181  TGTCAGTAGACACGTCCAAGAACCAAATCTCCCTCACGCTGACCTCTGTGACCGCCCCGGACACGGTGGTGTATTACTGTGCGAGAGCCG  270
V  88.8% (237/267)  IGHV4-34*01  206  .A.......................GT.......G.A.....G.............G.........CT...................---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -------------CDR3-IMGT--------------------->                                  
                                      D  L  L  P  S  F  V  W  L  L  T  F  Y  D  F  W  G  Q  G  P  L  V  A  V  S  S  
                    Query_8283   271  ACCTACTACCTTCTTTTGTCTGGTTATTAACATTTTATGACTTCTGGGGCCAGGGACCCCTGGTCGCCGTCTCCTCAG  348
D  93.8% (15/16)    IGHD3-9*01   12   -------------.....A..........-------------------------------------------------  27
J  92.7% (38/41)    IGHJ4*02     8    -------------------------------------.....A.............A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_79618

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           332     3e-93
IGHD3-22*01                                                                                           46.8    1e-09
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	C	TATTACTATGAAAGTAGTGCTTATTACTAC	GGCAGG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGACTATTACTATGAAAGTAGTGCTTATTACTACGGCAGG	AKDYYYESSAYYYGR	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  G  G  F  R  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8284   1    GGTCCCTGAGACTCTCCTGTGCAGGCGGTGGATTCAGGTTCAGTTCCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-30*18  47   ........................C.TC........CC......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  S  D  G  S  I  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_8284   91   AGTGGGTGGCAGTAATATCATCTGATGGAAGCATTAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATCCCC  180
V  92.4% (231/250)  IGHV3-30*18  137  .............T.......A.........T.A....................................................T..A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      Q  F  T  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  Y  Y  Y  E  S  S  
                    Query_8284   181  AGTTCACGTTGCATTTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCCAAAGACTATTACTATGAAAGTAGTG  270
V  92.4% (231/250)  IGHV3-30*18  227  ..AA....C..T..C.................................................G.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (28/30)    IGHD3-22*01  2    -----------------------------------------------------------------------...........T.......  20

                                      ---------------->                                  
                                      A  Y  Y  Y  G  R  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_8284   271  CTTATTACTACGGCAGGTGGGGCCAGGGAACCCAAGTCACCGTCTCCTCAG  321
D  93.3% (28/30)    IGHD3-22*01  21   G..........----------------------------------------  31
J  94.1% (32/34)    IGHJ4*02     15   -----------------................TG................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_299807

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           388     5e-110
IGHD2-8*01                                                                                            10.3    132   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGAGGGCTTCAATA	TGTAC	GCCTCG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGAGCGGAGGGCTTCAATATGTACGCCTCGTAC	SRAEGFNMYASY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_8285   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGGCACCTTCAGCAGTTA  90
V  92.8% (269/290)  IGHV1-69*01  6    ..................G...............................................T....................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  V  F  G  T  T  K  Y  A  Q
                    Query_8285   91   TGCTGTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCATCATACCTGTTTTTGGAACAACAAAATACGCACA  180
V  92.8% (269/290)  IGHV1-69*01  96   ....A.................................................G.....C...A.C.....T...G....C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  L  Q  G  R  L  T  I  T  A  D  E  S  T  S  T  V  Y  L  D  L  N  S  L  R  S  E  D  T  A
                    Query_8285   181  GAAGTTGCAGGGCAGACTCACGATTACCGCGGACGAATCCACGAGCACAGTTTACTTGGACCTGAACAGCCTGAGATCTGAAGACACGGC  270
V  92.8% (269/290)  IGHV1-69*01  186  ......C.........G.................................CC...A....G....G...............G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  S  R  A  E  G  F  N  M  Y  A  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8285   271  CATGTATTACTGTTCGAGAGCGGAGGGCTTCAATATGTACGCCTCGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.8% (269/290)  IGHV1-69*01  276  .G...........G......---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  100.0% (5/5)     IGHD2-8*01   8    -----------------------------------.....-------------------------------------------  12
J  100.0% (37/37)   IGHJ4*02     12   ----------------------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_299806

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           282     4e-78
IGHD3-16*01                                                                                           18.0    0.60 
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACAACG	TATGCTTAT	GTCAGTGCTTGGGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAACGTATGCTTATGTCAGTGCTTGGGGATGATGCTTTTGATGTC	ARRQRMLMSVLGDDAFDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  V  T  T  T  R  Y  S  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_8286   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCGTCACCACTACTAGATACTCCTGGGGTTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  86.0% (215/250)  IGHV4-39*01  49   ...............................G....A...G..G..G...T....A......C..........................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Q  M  F  Y  G  G  S  T  Y  Q  N  P  S  L  N  S  R  V  T  V  S  V  D  P  S 
                    Query_8286   91   CTGGAATGGATTGGGCAGATGTTCTATGGTGGGAGCACGTACCAGAACCCGTCGCTGAATAGTCGAGTCACCGTGTCCGTTGACCCGTCC  180
V  86.0% (215/250)  IGHV4-39*01  139  .....G.........AGT..C.AT...A..........C...T.C........C..C..G............A.A.....A...A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  S  Q  F  F  L  N  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  R  Q  R  M  L  M  S 
                    Query_8286   181  AAGAGTCAGTTCTTCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCTGTATATTATTGTGCGAGACGACAACGTATGCTTATGTCA  270
V  86.0% (215/250)  IGHV4-39*01  229  ....AC.......C......G....G...................A.......G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  26   -----------------------------------------------------------------------------.........----  34

                                      -IMGT--------------------->                                  
                                       V  L  G  D  D  A  F  D  V  W  G  Q  G  T  G  V  T  V  S  S  
                    Query_8286   271  GTGCTTGGGGATGATGCTTTTGATGTCTGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  331
J  96.0% (48/50)    IGHJ3*01     1    -----------...............................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_299805

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD6-19*01                                                                                           21.8    0.040
IGHJ3*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	C	ATAGAAGTGGCTGG	CCGTT	TGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACATAGAAGTGGCTGGCCGTTTGACGCTTTCGAGATC	ARHRSGWPFDAFEI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  Y  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_8287   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATTATCACTACTGGAGCTGGATCCGGCAGTCTCCAGGGAAGGGACTGGAG  90
V  93.8% (228/243)  IGHV4-59*01  49   ........................................G.AG.T.......................C.C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  I  Y  N  P  S  L  E  S  R  V  T  I  S  A  D  T  S  K  K 
                    Query_8287   91   TGGATTGGCTATATCTATTACAGTGGGAGCACCATCTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAG  180
V  93.8% (228/243)  IGHV4-59*01  139  ........G.........................A................A.....................T...............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  A  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  R  S  G  W  P  F  D  A 
                    Query_8287   181  CAGTTCTCCCTGAAGCTGAGCGCTGTAACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGACATAGAAGTGGCTGGCCGTTTGACGCT  270
V  93.8% (228/243)  IGHV4-59*01  229  .....................T....G....................G............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  5    ----------------------------------------------------------------....C.........------------  18
J  86.0% (43/50)    IGHJ3*02     1    -----------------------------------------------------------------------------------...T...  7

                                      -------->                                  
                                       F  E  I  W  G  Q  G  I  K  V  S  V  S  S  
                    Query_8287   271  TTCGAGATCTGGGGCCAGGGGATAAAGGTCTCCGTCTCTTCAG  313
J  86.0% (43/50)    IGHJ3*02     8    ..T..T...........A....C..T....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_299804

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            388     5e-110
IGHD1-20*01                                                                                           18.0    0.60  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-20*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TTG	ATAACTGGA	GA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTGATAACTGGAGA	LITG	283	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	69	70	67	2	1	95.7
CDR1-IMGT	70	93	24	21	3	0	87.5
FR2-IMGT	94	144	51	48	3	0	94.1
CDR2-IMGT	145	168	24	22	2	0	91.7
FR3-IMGT	169	282	114	109	5	0	95.6
CDR3-IMGT (germline)	283	283	1	1	0	0	100
Total	N/A	N/A	284	268	15	1	94.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q   L  E  L  R  *  R  S  L  G  P  Q  *  R  S  P  A  R  P  L  D  T  P  S  P  D  
                    Query_8288   1    GCAGCTGGTGCAGT-TGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATACGCCTTCACCAGATT  89
V  94.4% (268/284)  IGHV1-8*01   6    ..............C...G...............................................T.........A..........T.A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                      L  I  S  T  G  C  D  R  P  L  D  K  D  L  S  G  W  G  G  *  T  L  T  V  V  I  Q  T  L  H  
                    Query_8288   90   TGATATCCACTGGGTGCGACAGGCCACTGGACAAGGACTTGAGTGGATGGGGTGGATGAACCCTAACAGTGGTAATTCAGACTTTGCACA  179
V  94.4% (268/284)  IGHV1-8*01   96   .......A............................G..............A.......................CA...G..A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                      R  S  S  R  A  E  S  P  *  P  G  T  P  P  *  A  Q  P  T  W  S  *  A  A  *  D  L  T  T  R  
                    Query_8288   180  GAAGTTCCAGGGCAGAGTCACCTTGACCAGGAACACCTCCATAAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGACGACACGGC  269
V  94.4% (268/284)  IGHV1-8*01   186  ......................A..........................................................G........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--CDR3-IMGT-->                                  
                                      P  Y  I  T  V  L  I  T  G  D  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_8288   270  CGTATATTACTGTGTTGATAACTGGAGATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
V  94.4% (268/284)  IGHV1-8*01   276  ...G..........------------------------------------------------  289
                                        V  Y  Y  C                                                  
D  100.0% (9/9)     IGHD1-20*01  4    -----------------.........------------------------------------  12
J  100.0% (34/34)   IGHJ4*02     15   ----------------------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_299802

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           338     5e-95
IGHD1-26*01                                                                                           12.2    32   
IGHJ6*02                                                                                              102     4e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAAA	AAC	AGTGGAAGC	C	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAAACAGTGGAAGCCACTATTATTACTACGGTATGGACGTC	VKNSGSHYYYYGMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8289   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACTTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.5% (232/248)  IGHV3-30*18  47   .........................C...........C.......G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  D  N  K  Y  Y  L  D  S  V  T  G  R  F  T  I  S  R  D  N  S  
                    Query_8289   91   AGTGGGTGGCGGTCATATCATATGATGGAGATAATAAATACTATTTAGACTCCGTGACGGGCCGATTCACCATCTCCCGGGACAATTCCA  180
V  93.5% (232/248)  IGHV3-30*18  137  ..........A..T...............AG.............GC...........A...................A.A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  V  K  N  S  G  S  H  Y  Y  
                    Query_8289   181  AGAACACCCTGTATCTGCAAATGAACAGCCTGAGAGTTGAGGACACGGCTGTTTATTACTGTGTGAAAAACAGTGGAAGCCACTATTATT  270
V  93.5% (232/248)  IGHV3-30*18  227  .......G............................C...............G..........C....----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.9% (8/9)      IGHD1-26*01  6    -----------------------------------------------------------------------.....G...----------  14
J  96.6% (57/59)    IGHJ6*02     4    ---------------------------------------------------------------------------------....C..C.  12

                                      ---------------->                                 
                                      Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8289   271  ACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  96.6% (57/59)    IGHJ6*02     13   ..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_299801

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           363     1e-102
IGHD3-3*01                                                                                            46.8    1e-09 
IGHJ5*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCCA	TATTACGATTTTTGGAGTGGTTAT	CCAGGCCTCA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGATCCATATTACGATTTTTGGAGTGGTTATCCAGGCCTCACC	TTDPYYDFWSGYPGLT	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	244	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8290   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAATGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.3% (244/256)  IGHV3-15*01  47   .......T......................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  N  K  T  D  G  G  T  A  A  Y  A  A  P  V  K  G  R  F  T  I  S  T  D  
                    Query_8290   91   AGTGGGTTGGCCGTATTAAAAATAAAACTGATGGTGGCACAGCAGCCTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAACAGATG  180
V  95.3% (244/256)  IGHV3-15*01  137  .....................GC..............G...A...A......................................G.....  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  K  N  T  V  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  D  P  Y  Y  D  
                    Query_8290   181  ATTCAAAAAACACGGTCTATTTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTATTGTACCACAGATCCATATTACGATT  270
V  95.3% (244/256)  IGHV3-15*01  227  ..............C.G...C...........................................C...........--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (24/24)   IGHD3-3*01   2    --------------------------------------------------------------------------------..........  11

                                      R3-IMGT------------------>                                  
                                      F  W  S  G  Y  P  G  L  T  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_8290   271  TTTGGAGTGGTTATCCAGGCCTCACCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  330
D  100.0% (24/24)   IGHD3-3*01   12   ..............----------------------------------------------  25
J  97.2% (35/36)    IGHJ5*02     16   ------------------------...............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_149620

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           325     2e-91
IGHD6-19*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAGGGAGT	AGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCC	ARAGSSGWLDS	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  G  Y  W  S  W  I  R  K  P  P  G  K  G  L  E 
                    Query_8291   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATAACTAGTGGCTACTGGAGCTGGATCCGGAAGCCCCCTGGGAAGGGACTGGAG  90
V  92.6% (226/244)  IGHV4-59*01  49   .............................T........C.G....TA...................C.......A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  D  Y  N  S  S  L  K  S  R  V  T  I  S  F  D  R  S  K  N 
                    Query_8291   91   TGGATTGGATATATCTATTACAGTGGGAGCACCGACTACAATTCCTCCCTCAAGAGTCGAGTCACCATATCATTTGACAGGTCCAAGAAC  180
V  92.6% (226/244)  IGHV4-59*01  139  ........G........................A.......CC.............................G.A....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  S  S  G  W  L  D  S 
                    Query_8291   181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCC  270
V  92.6% (226/244)  IGHV4-59*01  229  ...............C....C..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-19*01  10   ------------------------------------------------------------------------.........---------  18
J  97.5% (39/40)    IGHJ4*02     7    ----------------------------------------------------------------------------------......A.  14

                                                                      
                                       W  G  Q  G  T  L  V  T  V  S  S
                    Query_8291   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  302
J  97.5% (39/40)    IGHJ4*02     15   ................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_275877

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     2e-91
IGHD4-4*01                                                                                            18.0    0.56 
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AATAAGAGATTC	GACTACAGT	TAT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAAAAATAAGAGATTCGACTACAGTTATTAC	TKNKRFDYSYY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  I  T  F  S  S  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8292   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCCGGAATCACCTTTAGCAGCTTTGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (228/248)  IGHV3-23*01  47   ........................C...T...T...............A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  T  I  S  G  S  A  V  A  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8292   91   AGTGGGTGGCAACTATTAGCGGTAGTGCAGTTGCCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.9% (228/248)  IGHV3-23*01  137  .......CT..G.......T.......GT.G.AG........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  V  Y  L  Q  M  N  A  L  R  A  E  D  T  A  V  Y  Y  C  T  K  N  K  R  F  D  Y  S  
                    Query_8292   181  AGAACACGGTGTATCTGCAAATGAACGCCCTGAGAGCCGAGGACACGGCCGTTTACTACTGCACGAAAAATAAGAGATTCGACTACAGTT  270
V  91.9% (228/248)  IGHV3-23*01  227  ........C.................AG........................A..T.....TG.....----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD4-4*01   2    --------------------------------------------------------------------------------.........-  10

                                      ---->                                  
                                      Y  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_8292   271  ATTACTGGGGCCAGGGAACCCTGGTCTCGGTCTCCTCAG  309
J  94.6% (35/37)    IGHJ4*02     12   --........................A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_299809

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           352     3e-99
IGHD5-18*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGTCATGGTTAC	GGAGGAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGTCATGGTTACGGAGGAATTGACTAC	ARYSHGYGGIDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	234	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8293   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (234/243)  IGHV4-59*01  49   ...............................G........G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  S  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  K  N 
                    Query_8293   91   TGGATTGGTTATATCTACTACCGTGGGAGCTCCAACTCCAACCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAAGAAC  180
V  96.3% (234/243)  IGHV4-59*01  139  ........G........T...A........A......A......................G.............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  I  D 
                    Query_8293   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGTCATGGTTACGGAGGAATTGAC  270
V  96.3% (234/243)  IGHV4-59*01  229  .............A.................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  86.7% (13/15)    IGHD5-18*01  6    ---------------------------------------------------------------.....CT........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8293   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_149628

Length=410
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            439     2e-125
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	286	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_8294   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  98.3% (286/291)  IGHV1-2*04   6    ..................G.............AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_8294   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAATGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.3% (286/291)  IGHV1-2*04   96   ..........................................G...............................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_8294   181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  98.3% (286/291)  IGHV1-2*04   186  ..........................................................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W  G  Q
                    Query_8294   271  CGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGGGGCCA  360
V  98.3% (286/291)  IGHV1-2*04   276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  91.2% (52/57)    IGHJ6*02     6    ----------------------------------------------------------....A...........................  37

                                                               
                                        G  T  L  V  T  V  S  S 
                    Query_8294   361  GGGAACCCTGGTCACCGTCTCCTCA  385
J  91.2% (52/57)    IGHJ6*02     38   A..G...AC................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40183344


Query= Query_8182

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           308     4e-86
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	246	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	102	12	0	89.5
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	223	26	0	89.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_8295   4    CCCTGAGACTCTCCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  89.6% (223/249)  IGHV4-61*08  50   .....TCC...A........G.........G.......AG..G..G.....A......................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S  
                    Query_8295   94   TAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCCA  183
V  89.6% (223/249)  IGHV4-61*08  140  .G..................T..T................C.................G.......TC.........G.A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N  
                    Query_8295   184  GGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAACT  273
V  89.6% (223/249)  IGHV4-61*08  230  A.................A.....GC..........................G.....C..........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  86.4% (19/22)    IGHD2-15*01  7    -------------------------------------------------------------------------.....G..G.....G..  23

                                      -IMGT----------------------->                                  
                                      C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8295   274  GCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  86.4% (19/22)    IGHD2-15*01  24   .....----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    --------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_249011

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD3-10*01                                                                                           31.5    6e-05 
IGHJ5*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GTG	TTACTATGATTCGGGGAGT	GACTCGGT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACGTGTTACTATGATTCGGGGAGTGACTCGGTACAACTGGCTCGACCCC	VRRVTMIRGVTRYNWLDP	290	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	104	10	0	91.2
CDR3-IMGT (germline)	290	296	7	6	1	0	85.7
Total	N/A	N/A	294	273	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  
                    Query_8296   3    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGGTACAGTTTTACCA  92
V  92.9% (273/294)  IGHV5-51*01  2    ..G..............................................................A..........A.....C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  V  D  S  D  T  T  Y  
                    Query_8296   93   GTTACTGGATCGCCTGGGTGCGCCAGATGCCCGGTAAAGGCCTGGAATGGATGGGGATCATCTATCCTGTTGACTCTGACACCACTTACA  182
V  92.9% (273/294)  IGHV5-51*01  92   .C..........G.....................G...........G......................G.........T....GA....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  A  I  S  T  A  Y  L  Q  W  S  S  L  S  A  S  D  
                    Query_8296   183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGGCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAGCGCCTCGGACA  272
V  92.9% (273/294)  IGHV5-51*01  182  .................................C.......T....................................AG..........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------------CDR3-IMGT--------------------->                   
                                      S  G  I  Y  Y  C  V  R  R  V  T  M  I  R  G  V  T  R  Y  N  W  L  D  P  W  G  Q  G  T  L  
                    Query_8296   273  GCGGCATTTACTACTGTGTGAGACGTGTTACTATGATTCGGGGAGTGACTCGGTACAACTGGCTCGACCCCTGGGGCCAGGGAACCCTGG  362
V  92.9% (273/294)  IGHV5-51*01  272  C..C...G..T.......C.....------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  94.7% (18/19)    IGHD3-10*01  4    ---------------------------........G..........--------------------------------------------  22
J  98.0% (50/51)    IGHJ5*02     1    ------------------------------------------------------........T...........................  36

                                                     
                                      V  T  V  S  S  
                    Query_8296   363  TCACCGTCTCCTCAG  377
J  98.0% (50/51)    IGHJ5*02     37   ...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_8183

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*03                                                                                           332     3e-93
IGHD2-8*01                                                                                            18.0    0.59 
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*03	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCCTGG	ATTGCACTGATGGTG	GCTGTTATGCTTTTGCCCAA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATCGCCTGGATTGCACTGATGGTGGCTGTTATGCTTTTGCCCAA	VKDRLDCTDGGCYAFAQ	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  N  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8297   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACATTCAGTAACTATGCTATCCACTGGGTCCGCCAGGCTCCTGGGAAGGGACTGG  90
V  92.4% (231/250)  IGHV3-64*03  47   .....................................C.......G.........G....................A.............  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  P  N  G  G  S  T  Y  F  A  D  S  V  K  G  R  F  T  I  P  R  D  N  S  
                    Query_8297   91   AATATGTTTCAGCGATTAGTCCTAATGGAGGTAGTACATACTTCGCAGACTCAGTGAAGGGCAGATTCACCATCCCCAGAGACAATTCCA  180
V  92.4% (231/250)  IGHV3-64*03  137  .............T......AG......G.....C.......A...............................T...............  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  L  F  Y  C  V  K  D  R  L  D  C  T  D  
                    Query_8297   181  GGAACACACTATATCTCCAGATGAGCAGTCTGAGAGCTGAGGACACGGCTCTCTTTTACTGTGTGAAAGATCGCCTGGATTGCACTGATG  270
V  92.4% (231/250)  IGHV3-64*03  227  A......G..G...G....A..............................G.G.A...............--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  86.7% (13/15)    IGHD2-8*01   6    ------------------------------------------------------------------------------....T...A...  17

                                      GT-------------------->                                  
                                      G  G  C  Y  A  F  A  Q  W  G  P  G  T  L  V  S  V  S  S  
                    Query_8297   271  GTGGCTGTTATGCTTTTGCCCAATGGGGCCCGGGAACCCTGGTCTCCGTCTCCTCAG  327
D  86.7% (13/15)    IGHD2-8*01   18   ...------------------------------------------------------  20
J  94.1% (32/34)    IGHJ4*02     15   -----------------------.......A.............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_46406

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           355     3e-100
IGHD6-25*01                                                                                           18.0    0.57  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAG	ATAGCAGCG	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCCAGATAGCAGCGCCCTTTGATTAC	TRGQIAAPFDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8298   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-33*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  S  D  G  N  N  K  Y  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8298   91   AGTGGGTGGCAGTTATTTGGTCTGATGGAAATAATAAATATTATGCAGCCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  95.6% (238/249)  IGHV3-33*01  137  ................A....A........G.........C.......A....................................T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  G  S  L  T  A  E  D  T  A  V  Y  Y  C  T  R  G  Q  I  A  A  P  F  
                    Query_8298   181  AGAACACGCTGTATCTGCAAATGGGCAGCCTGACAGCCGAGGACACGGCTGTGTATTACTGTACGAGAGGCCAGATAGCAGCGCCCTTTG  270
V  95.6% (238/249)  IGHV3-33*01  227  .......................AA........G............................G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-25*01  5    --------------------------------------------------------------------------.........-------  13
J  95.5% (42/44)    IGHJ4*02     5    -------------------------------------------------------------------------------------.....  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_8298   271  ATTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  309
J  95.5% (42/44)    IGHJ4*02     10   .C...................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_88528

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         311     4e-87
IGHD3-10*01                                                                                           14.1    8.4  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CAAGGACACCAG	TATGGTT	GGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGACAAGGACACCAGTATGGTTGGGTGGTTCGACCCC	ARDKDTSMVGWFDP	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	225	26	0	89.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  V  V  S  G  D  S  I  S  S  G  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  A 
                    Query_8299     1    ACCCTGTCCCTCACCTGCGTTGTGTCTGGTGACTCCATCAGCAGCGGTGGTTACTACTGGAGTTGGCTCCGCCAGCCCCCAGGGAAGGCC  90
V  89.6% (225/251)  IGHV4-30-4*01  49   ..................AC...C.......G............T....A................A.....................G.  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         P  E  W  I  G  Y  F  Y  Y  G  G  N  T  Y  Y  N  P  S  L  E  S  R  T  S  I  S  V  D  A  S 
                    Query_8299     91   CCGGAATGGATTGGGTACTTCTATTATGGTGGGAACACCTACTACAACCCGTCCCTCGAGAGTCGAACTTCCATATCAGTAGACGCGTCC  180
V  89.6% (225/251)  IGHV4-30-4*01  139  .T...G............A.......CA......G......................A........GT.A..............A.....  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  L  F  S  L  N  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  K  D  T  S  M  V 
                    Query_8299     181  AAGAACCTGTTCTCCCTGAACTTGACCTCTGTGACTGCCGCAGACACGGCCGTCTATTACTGCGCCAGGGACAAGGACACCAGTATGGTT  270
V  89.6% (225/251)  IGHV4-30-4*01  229  .......A............GC...G...........................G........T.....A..-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-10*01    8    -----------------------------------------------------------------------------------.......  14

                                        -------------->                                  
                                         G  W  F  D  P  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_8299     271  GGGTGGTTCGACCCCTGGGGCCAGGGAATCCTCGTCACCGTCTCCTCAG  319
J  95.7% (44/46)    IGHJ5*02       6    ---.........................C...G................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_316777

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           316     2e-88
IGHD6-6*01                                                                                            18.0    0.59 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ATAAAAAGGGTGGGA	TATACCAACTCGTCC	GGGGCGA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ATAAAAAGGGTGGGATATACCAACTCGTCCGGGGCGAACTTTGAGAAC	IKRVGYTNSSGANFEN	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	23	1	0	95.8
FR2-IMGT	51	101	51	51	0	0	100
CDR2-IMGT	102	125	24	23	1	0	95.8
FR3-IMGT	126	239	114	105	9	0	92.1
Total	N/A	N/A	224	213	11	0	95.1


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_8300   16   GTGCAGCCTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATAT  105
V  95.1% (213/224)  IGHV3-30*03  65   ............................C.............................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  Y  D  G  S  N  R  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  V  Y  L  
                    Query_8300   106  CATATGATGGAAGTAATAGATTCTATGCTGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGGTGTATCTGC  195
V  95.1% (213/224)  IGHV3-30*03  155  ..................A..A......A...................................................C.........  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  K  N  L  R  T  E  D  T  A  V  Y  Y  C  I  K  R  V  G  Y  T  N  S  S  G  A  N  F  E  
                    Query_8300   196  AAATGAAGAACCTAAGAACTGAGGACACGGCTGTCTATTATTGTATAAAAAGGGTGGGATATACCAACTCGTCCGGGGCGAACTTTGAGA  285
V  95.1% (213/224)  IGHV3-30*03  245  .......C.G...G...G................G.....C...----------------------------------------------  288
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                                               
D  86.7% (13/15)    IGHD6-6*01   4    -----------------------------------------------------------....G..G.......----------------  18
J  95.6% (43/45)    IGHJ4*02     4    ---------------------------------------------------------------------------------.......CT  12

                                      ->                                  
                                      N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8300   286  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  95.6% (43/45)    IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_316776

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            372     2e-105
IGHJ6*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AGGAGACTTCTAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAAGGAGACTTCTATTACTACTACTACACTTTGGACGTC	AREGDFYYYYYTLDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8301  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  97.6% (244/250)  IGHV3-9*01  47   ..........................................................................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  I  S  W  N  S  D  T  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8301  91   AGTGGGTCTCAGGTATTAGTTGGAACAGTGATACCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (244/250)  IGHV3-9*01  137  .........................T....G..G........................................................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  R  E  G  D  F  Y  Y  Y  
                    Query_8301  181  AGAACTCCCTGTATCTGCAAATGAATAGTCTGAGACCTGAGGACACGGCCTTGTATTACTGTGCAAGAGAAGGAGACTTCTATTACTACT  270
V  97.6% (244/250)  IGHV3-9*01  227  .........................C.........G..............................A...--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
J  94.7% (54/57)    IGHJ6*02    6    -----------------------------------------------------------------------------------.......  12

                                     ---------------->                                 
                                     Y  Y  T  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8301  271  ACTACACTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  94.7% (54/57)    IGHJ6*02    13   .....GG.A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_247608

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           367     6e-104
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8302   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8302   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.2% (242/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_8302   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  97.2% (242/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_8302   271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_247609

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           333     1e-93
IGHD1-7*01                                                                                            19.9    0.16 
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGGCCC	GTATAATTCGAACTAC	CCCCATAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGCCCGTATAATTCGAACTACCCCCATACCTACTACTACTGTGGCATGGACGTC	AKGPYNSNYPHTYYYCGMDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	10	1	0	90.9
CDR1-IMGT	25	48	24	24	0	0	100
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	23	1	0	95.8
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	229	221	8	0	96.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_8303   14   GTGCAGTCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATAT  103
V  96.5% (221/229)  IGHV3-30*18  65   ......C...................................................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  Y  D  G  S  N  Q  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  F  L  
                    Query_8303   104  CATATGATGGAAGTAATCAATACTATGCAGAGTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCAAGAACACACTGTTTCTGC  193
V  96.5% (221/229)  IGHV3-30*18  155  .................A.............C...................................T...........G....A.....  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------------CDR3-IMGT-----------
                                      Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  K  G  P  Y  N  S  N  Y  P  H  T  Y  Y  Y  
                    Query_8303   194  AAATGAACAGCCTGAGAGCTGGGGACACGGCTGTGTATTATTGTGCGAAGGGCCCGTATAATTCGAACTACCCCCATACCTACTACTACT  283
V  96.5% (221/229)  IGHV3-30*18  245  .....................A..................C........-----------------------------------------  293
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  87.5% (14/16)    IGHD1-7*01   2    -------------------------------------------------------......C.G.......-------------------  17
J  94.8% (55/58)    IGHJ6*02     5    -------------------------------------------------------------------------------...........  15

                                      ------------->                                 
                                      C  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8303   284  GTGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
J  94.8% (55/58)    IGHJ6*02     16   AC..T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_84498

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCCACGGGCTC	AGCAGTGGC	GATGACTCTGTTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCCACGGGCTCAGCAGTGGCGATGACTCTGTTTATGACTAC	VVHGLSSGDDSVYDY	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	241	1	1	0	0	100
Total	N/A	N/A	241	218	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  R  V  S  G  G  S  I  S  D  S  H  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_8304   1    ACCCTGTCCCTCACCTGCCGTGTCTCTGGTGGCTCCATCAGCGACAGTCACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.5% (218/241)  IGHV4-4*02   49   ..................GC......................AGT...A.........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  F  H  S  G  S  A  K  Y  N  P  S  L  Q  S  R  L  T  M  S  L  D  K  S  R 
                    Query_8304   91   GAGTGGATTGGGGAAGTTTTTCACAGTGGGAGCGCCAAGTACAACCCGTCCCTTCAGAGTCGACTCACCATGTCACTAGACAAGTCTAGG  180
V  90.5% (218/241)  IGHV4-4*02   139  ...............A.C.A...T.........A....C..............CA........G.......A...G..........C.A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  K  L  Q  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  H  G  L  S  S  G  D  D 
                    Query_8304   181  AACCAGTTCTCCCTGAAGCTGCAGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGTGGTCCACGGGCTCAGCAGTGGCGATGAC  270
V  90.5% (218/241)  IGHV4-4*02   229  .....................AGC.....................................-----------------------------  289
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  100.0% (9/9)     IGHD6-19*01  7    ---------------------------------------------------------------------------.........------  15

                                      -------------->                                  
                                       S  V  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8304   271  TCTGTTTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (41/41)   IGHJ4*02     8    --------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_247602

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           430     1e-122
IGHD3-9*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGTT	GTATTACGATATCTTG	CGGCGGGGAGG	CTACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGTTGTATTACGATATCTTGCGGCGGGGAGGCTACAACGGTTTGGACGTC	ARGRLYYDILRRGGYNGLDV	289	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	19	5	0	79.2
FR3-IMGT	175	288	114	112	2	0	98.2
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	285	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  T  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_8305   1    CAGATGCAGCTGGTGCAGTCTGGGACTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  90
V  96.6% (285/295)  IGHV1-69*01  1    ...G....................G.................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  S  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  T  I  P  M  F  G  T  A  N  Y 
                    Query_8305   91   AGCTATTCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGACCATCCCCATGTTTGGGACGGCAAACTAC  180
V  96.6% (285/295)  IGHV1-69*01  91   ......G......................................................T......T..C.....T..A.........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_8305   181  GCACAGAAGTTCCAGGGCCGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGAC  270
V  96.6% (285/295)  IGHV1-69*01  181  ..................A.......................................................................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  V  Y  Y  C  A  R  G  R  L  Y  Y  D  I  L  R  R  G  G  Y  N  G  L  D  V  W  G  Q  G 
                    Query_8305   271  ACGGCCGTCTATTACTGTGCGAGAGGCCGGTTGTATTACGATATCTTGCGGCGGGGAGGCTACAACGGTTTGGACGTCTGGGGCCAAGGG  360
V  96.6% (285/295)  IGHV1-69*01  271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  93.8% (15/16)    IGHD3-9*01   1    --------------------------------............T...------------------------------------------  16
J  96.2% (50/52)    IGHJ6*02     11   -----------------------------------------------------------....T.....A....................  41

                                                           
                                       T  T  V  T  V  S  S 
                    Query_8305   361  ACCACGGTCACCGTCTCCTCA  381
J  96.2% (50/52)    IGHJ6*02     42   .....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_247603

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         360     1e-101
IGHD2-2*02                                                                                            37.2    1e-06 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	TCACCTCGGC	TGTAGTAGTACCAGCTTCTATA	GC	CTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTCACCTCGGCTGTAGTAGTACCAGCTTCTATAGCCTTTAACTCC	ARVTSAVVVPASIAFNS	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  A  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_8306     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCGCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-4*01  49   ..................A..............T...............A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  H  I  Y  Y  N  G  R  T  Y  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_8306     91   CTGGAGTGGATTGGGCACATCTATTACAATGGGAGGACCTACTACAACCCGTCCCTCAAGAGTCGAGTTTCCATATCAGTAGACACGTCC  180
V  96.0% (240/250)  IGHV4-30-4*01  139  ...............T............G......C.................................A....................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  T  S  A  V  V  V 
                    Query_8306     181  AAGAACCAGTTCTCCCTGAAGCTGAGTTCTGTGACTGCCGCTGACACGGCCGTCTATTACTGTGCCAGAGTCACCTCGGCTGTAGTAGTA  270
V  96.0% (240/250)  IGHV4-30-4*01  229  ..........................C..............A...........G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.5% (21/22)    IGHD2-2*02     8    --------------------------------------------------------------------------------..........  17

                                        MGT-------------------->                                  
                                         P  A  S  I  A  F  N  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8306     271  CCAGCTTCTATAGCCTTTAACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.5% (21/22)    IGHD2-2*02     18   ......G.....----------------------------------------------  29
J  95.5% (42/44)    IGHJ4*02       5    --------------....G...A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_84497

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            280     1e-77
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GTTCAGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGGTTCAGGGTGGCTGGCTGACTCC	AGGSGWLADS	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	96	18	0	84.2
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	214	35	0	85.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  V  S  E  F  T  F  R  N  F  W  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8307   1    GGTCCCTGAGACTCTCCTGTGTAGTCTCTGAATTCACCTTTAGAAACTTTTGGATAAACTGGGTCCGTCAGGCTCCAGGGAAGGGTCTGG  90
V  85.9% (214/249)  IGHV3-7*01   47   .....................C..C.....G............T.G..A......G.G.........C.................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  I  I  Q  Q  D  G  S  D  E  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  A  
                    Query_8307   91   AGTGGCTGGCCATCATACAGCAGGATGGAAGTGACGAATACTATGCGGACTCGGTGAAGGGCCGCTTCACCATCTCCAGAGACACCGCCA  180
V  85.9% (214/249)  IGHV3-7*01   137  .....G......A....A....A...........GA.........T......T...........A...................A.....  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  S  A  V  F  L  Q  M  D  G  L  R  A  D  D  T  A  V  Y  F  C  A  G  G  S  G  W  L  A  D  
                    Query_8307   181  AGAGTGCGGTCTTTCTGCAAATGGACGGCCTGCGGGCCGACGACACGGCTGTGTACTTCTGTGCGGGAGGTTCAGGGTGGCTGGCTGACT  270
V  85.9% (214/249)  IGHV3-7*01   227  ...ACT.AC.G.A..........A..A.....A.A.....G..............T.A.......A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  11   ----------------------------------------------------------------------------........------  18
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8307   271  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_247601

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATATA	CTACGATT	GTTCAAGGC	TCGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATATATACTACGATTGTTCAAGGCTCGAGCCC	AKDIYYDCSRLEP	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  R  G  L  
                    Query_8308   1    GGTCCCTGAGACTCTCCTGTGCAACGTCTGGATTCACCTTTAGCAACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGC  90
V  90.4% (226/250)  IGHV3-23*01  47   .......................G.C...................G...........G.......................A.......G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  R  V  S  C  V  S  G  G  G  E  T  T  H  Y  R  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8308   91   AGCGGGTCTCATGTGTTAGTGGTGGTGGTGAAACAACACACTACAGAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  90.4% (226/250)  IGHV3-23*01  137  ..T........GC.A........A......GT.GC...T.....GC............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      M  D  T  L  Y  L  Q  M  H  G  L  R  T  E  D  T  A  I  Y  Y  C  A  K  D  I  Y  Y  D  C  S  
                    Query_8308   181  TGGACACGCTGTATCTGCAAATGCACGGCCTGAGAACCGAGGACACGGCCATATATTACTGTGCGAAAGATATATACTACGATTGTTCAA  270
V  90.4% (226/250)  IGHV3-23*01  227  A.A....................A..A........G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD5-12*01  14   ----------------------------------------------------------------------------........------  21

                                      ---------->                                  
                                      R  L  E  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8308   271  GGCTCGAGCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ5*02     10   ---....C.....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_84491

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            346     2e-97
IGHD3-3*01                                                                                            21.8    0.044
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAG	CGATTTGTGGAGAGGTT	CTACCCCTAAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGAGATAGCGATTTGTGGAGAGGTTCTACCCCTAAGTTTGACTAC	ARDSDLWRGSTPKFDY	269	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	40	5	0	88.9
CDR1-IMGT	47	76	30	25	5	0	83.3
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	154	27	26	1	0	96.3
FR3-IMGT	155	268	114	102	12	0	89.5
CDR3-IMGT (germline)	269	276	8	7	1	0	87.5
Total	N/A	N/A	275	248	27	0	90.2


Alignments

                                     <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                      L  V  K  P  T  Q  T  L  S  L  T  C  T  I  S  G  D  S  V  S  S  E  S  V  A  W  N  W  V  R 
                    Query_8309  2    CTGGTGAAACCCACACAGACTCTCTCACTCACCTGTACCATCTCCGGAGACAGTGTCTCCAGCGAAAGTGTTGCTTGGAACTGGGTCAGG  91
V  90.2% (248/275)  IGHV6-1*01  31   ........G...T.G.....C...............G..........G...........T...A.C....C.............A.....  120
                                      L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                     ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                      Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  M  S  K  W  Y  N  H  Y  S  D  S  V  K  S  R 
                    Query_8309  92   CAGTCGCCGTCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACATGTCCAAGTGGTATAATCATTATTCAGATTCTGTGAAAAGTCGA  181
V  90.2% (248/275)  IGHV6-1*01  121  .....C..A.....................................G................G.....G...TA...............  210
                                      Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                     --------------------------FR3-IMGT----------------------------------------------------><--
                                      M  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  M  N  S  V  T  P  E  D  T  A  M  Y  Y  C  A 
                    Query_8309  182  ATGACCATCGACCCAGACACATCCAAGAACCAGTTCTCGCTACAGATGAACTCTGTGACCCCCGAGGACACGGCTATGTACTACTGTGCT  271
V  90.2% (248/275)  IGHV6-1*01  211  ..A......A............................C..G...C.............T...............G....T........A  300
                                      I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                     -----------------CDR3-IMGT------------------>                                  
                                      R  D  S  D  L  W  R  G  S  T  P  K  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_8309  272  AGAGATAGCGATTTGTGGAGAGGTTCTACCCCTAAGTTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  350
V  90.2% (248/275)  IGHV6-1*01  301  .....--------------------------------------------------------------------------  305
                                      R                                                                             
D  88.2% (15/17)    IGHD3-3*01  7    --------......T.....T....------------------------------------------------------  23
J  97.7% (42/43)    IGHJ4*02    6    ------------------------------------.....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_247607

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43D*01                                                                                          350     9e-99
IGHD3-10*01                                                                                           23.8    0.012
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43D*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TAAAGAGGGCCGAATTCTCGGATATTGG	TATGGTTCGAGGAGT	CCCCACTATATCTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATATAAAGAGGGCCGAATTCTCGGATATTGGTATGGTTCGAGGAGTCCCCACTATATCTCACTACTACTATGGTATGGACGTC	AKDIKRAEFSDIGMVRGVPTISHYYYGMDV	237	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	24	0	0	100
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	113	1	0	99.1
CDR3-IMGT (germline)	237	246	10	10	0	0	100
Total	N/A	N/A	234	229	5	0	97.9


Alignments

                                       <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                          T  A  S  G  F  T  F  D  D  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  L  I  
                    Query_8310    13   GTACAGCCTCTGGATTCACCTTTGATGATTATGCCATACACTGGGTCCGTCAAGCTCCGGGGAAGGGTCTGGAGTGGGTCTCTCTTATTA  102
V  97.9% (229/234)  IGHV3-43D*01  65   ..G..................................G....................................................  154
                                          A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  L  I  

                                       ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                       S  W  D  G  G  N  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  S  L  Y  L  
                    Query_8310    103  GTTGGGATGGTGGTAACACACACTATGCAGACTCTGTGAAGGGTCGATTCACCATCTCCAGAGACAACAGCAAAAACTCCCTGTATCTGC  192
V  97.9% (229/234)  IGHV3-43D*01  155  ...............G...CT.....................................................................  244
                                       S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  S  L  Y  L  

                                       -------------------------------------------><----------------------------------------CDR3-
                                       Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  I  K  R  A  E  F  S  D  I  G  M  V  
                    Query_8310    193  AAATGAACAGTCTGAGAGCTGAGGACACCGCCTTGTATTACTGTGCAAAAGATATAAAGAGGGCCGAATTCTCGGATATTGGTATGGTTC  282
V  97.9% (229/234)  IGHV3-43D*01  245  ......................................................------------------------------------  298
                                       Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                                      
D  93.3% (14/15)    IGHD3-10*01   8    ----------------------------------------------------------------------------------........  15

                                       IMGT--------------------------------------->                                 
                                       R  G  V  P  T  I  S  H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8310    283  GAGGAGTCCCCACTATATCTCACTACTACTATGGTATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTCCTCA  359
D  93.3% (14/15)    IGHD3-10*01   16   .G.....----------------------------------------------------------------------  22
J  96.4% (54/56)    IGHJ6*02      7    ---------------------..........C....................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_247604

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           382     4e-108
IGHD3-10*01                                                                                           12.2    35    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCCAGC	GGGAGT	GAAAAGTTAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGCAGATCCAGCGGGAGTGAAAAGTTAATTGACTCT	GRSSGSEKLIDS	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	4	2	0	66.7
Total	N/A	N/A	288	266	22	0	92.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  E  A  S  G  Y  T  F  S  N  Y 
                    Query_8311   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAAGTCTCCTGCGAGGCTTCTGGTTACACCTTTAGCAACTAC  91
V  92.4% (266/288)  IGHV1-18*04  7    ..................................................G.........A.....................C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       E  I  S  W  V  R  Q  A  R  G  Q  G  L  E  W  M  G  C  I  S  G  Y  S  G  D  T  E  Y  A  Y 
                    Query_8311   92   GAAATCAGCTGGGTGCGACAGGCCCGTGGACAAGGGCTTGAGTGGATGGGATGCATCAGCGGTTACAGTGGTGACACAGAGTATGCATAC  181
V  92.4% (266/288)  IGHV1-18*04  97   .GT......................C...........................G.......C.....A....A.....A.C......C.G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       Q  F  R  G  R  V  T  M  T  T  D  T  S  A  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_8311   182  CAATTCCGGGGCAGAGTCACCATGACCACAGACACATCCGCGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.4% (266/288)  IGHV1-18*04  187  A.GC...A...............................A..................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  G  R  S  S  G  S  E  K  L  I  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8311   272  GTGTATTACTGTGGCAGATCCAGCGGGAGTGAAAAGTTAATTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.4% (266/288)  IGHV1-18*04  277  .............CG...----------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD3-10*01  17   ------------------------......----------------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    ----------------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_247605

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAACA	TATGACT	TATAGCAGT	AGTCCATTA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATATGACTTATAGCAGTAGTCCATTAGACTAC	AKHMTYSSSPLDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	13	8	0	61.9
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	222	29	0	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  A  S  V  S  S  G  D  Y  Y  W  G  W  I  R  Q  P  P  G  R  G 
                    Query_8312   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCGTCAGTAGTGGTGACTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAGGGGG  90
V  88.4% (222/251)  IGHV4-39*01  49   ..................A............G....A....C...A..AGT..................................A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  Y  N  T  R  Y  P  Y  Y  S  L  S  L  K  S  R  V  T  I  S  V  D  S  S 
                    Query_8312   91   CTGGAGTGGCTTGGGAGTATCTATAATACTAGATATCCCTACTATAGTTTGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACTCGTCC  180
V  88.4% (222/251)  IGHV4-39*01  139  .........A..............T...G.G.GAGCA.......C.ACCC..................................A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  E  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  H  M  T  Y  S  S  S 
                    Query_8312   181  AAGAACGAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTTTATTTCTGTGCGAAACATATGACTTATAGCAGTAGT  270
V  88.4% (222/251)  IGHV4-39*01  229  ......C............A.................................G....A........G...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD6-19*01  4    ------------------------------------------------------------------------------.........---  12

                                      ----------->                                  
                                       P  L  D  Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_8312   271  CCATTAGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCTTCAG  316
J  95.0% (38/40)    IGHJ4*02     9    ------.............A.....................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_192292

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           392     2e-111
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GG	GGGTAT	GACGCTCCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGTATGACGCTCCGTTTGAGTAC	ARGGYDAPFEY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  S  F  T  S  N 
                    Query_8313   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTACCAGCAAC  91
V  93.4% (270/289)  IGHV1-18*04  7    .................................................A..........................C..........T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  T  Y  N  G  N  T  K  Y  V  P 
                    Query_8313   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGATGGATCAGCACTTACAATGGTAACACAAAATATGTACCG  181
V  93.4% (270/289)  IGHV1-18*04  97   .....................................T......................G...................C....C..A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  V  T  G  D  T  S  I  S  T  V  Y  M  E  L  S  S  L  K  S  E  D  T  A 
                    Query_8313   182  AAGCTCCAGGGCAGAGTCACCGTGACCGGGGACACCTCCATAAGCACAGTCTACATGGAGCTGAGCAGCCTGAAATCTGAGGACACGGCC  271
V  93.4% (270/289)  IGHV1-18*04  187  .....................A.....ACA.....A....CG.......C...............G.......G......C.........  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  G  G  Y  D  A  P  F  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8313   272  GTGTATTACTGTGCGAGAGGGGGGTATGACGCTCCGTTTGAGTACTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  350
V  93.4% (270/289)  IGHV1-18*04  277  ...................------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD6-13*01  1    ---------------------......----------------------------------------------------  6
J  95.3% (41/43)    IGHJ4*02     6    ------------------------------------.....C....................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_113738

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD1-26*01                                                                                           27.6    9e-04 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  N  Y
                    Query_8314   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAATTA  90
V  95.2% (277/291)  IGHV5-51*01  6    .................................................................G....................GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_8314   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   .........................................................C................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  R  S  R  G  A  S  D  T  A
                    Query_8314   181  GTCTTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTATTTGCAGTGGAGGAGCCGGGGGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  ...C...C..............................................CC..........C....T.AA...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  F  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  P  G  T  T  V
                    Query_8314   271  CATATATTTCTGTGCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTCTGGGGCCCGGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  ...G....A............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (14/14)   IGHD1-26*01  4    -----------------------------..............-----------------------------------------------  17
J  93.0% (53/57)    IGHJ6*02     6    ----------------------------------------------.......A......T................AA...........  49

                                                   
                                        T  V  S  S 
                    Query_8314   361  CACCGTCTCCTCA  373
J  93.0% (53/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_113739

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           419     2e-119
IGHD5-18*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	GTGGACACACCTATGG	AGCCCGAACCGACCCCCATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGGACACACCTATGGAGCCCGAACCGACCCCCATCTTGACTAC	ARRGHTYGARTDPHLDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  I  F  R  T  Y
                    Query_8315   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACATCTTTAGAACCTA  90
V  96.2% (279/290)  IGHV5-51*01  6    ....................C.............................A..........................G.....CC.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_8315   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.2% (279/290)  IGHV5-51*01  96   ........G.................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  H  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8315   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACCACTCCATTAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (279/290)  IGHV5-51*01  186  ..................................A.G.....C...............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  A  R  R  G  H  T  Y  G  A  R  T  D  P  H  L  D  Y  W  G  Q  G  T  L  V  S  V
                    Query_8315   271  CATATATTACTGTGCGAGACGTGGACACACCTATGGAGCCCGAACCGACCCCCATCTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGT  360
V  96.2% (279/290)  IGHV5-51*01  276  ...G................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  87.5% (14/16)    IGHD5-18*01  1    --------------------.....T...G......------------------------------------------------------  16
J  97.6% (41/42)    IGHJ4*02     7    --------------------------------------------------------.............................A....  40

                                              
                                        S  S  
                    Query_8315   361  CTCCTCAG  368
J  97.6% (41/42)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_113736

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGATGGA	ATTACTAT	CAAACGAAGCA	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCGATGGAATTACTATCAAACGAAGCAATGGTTTTGATATA	TRGDGITIKRSNGFDI	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_8316   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGGCTTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  94.7% (233/246)  IGHV3-53*01  47   ................................................A.......AGC......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_8316   91   AGTGGGTCTCAGTTATTTACAGCGGTGGTACCACATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.7% (233/246)  IGHV3-53*01  137  ...................T..........G........A..................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  L  Y  Y  C  T  R  G  D  G  I  T  I  K  R  
                    Query_8316   181  ACACGCTGTATCTTCAAATGCACAGCCTGAGAGCCGACGACACGGCCCTGTACTACTGTACGAGAGGCGATGGAATTACTATCAAACGAA  270
V  94.7% (233/246)  IGHV3-53*01  227  ....................A................G.........G....T......G......------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  3    --------------------------------------------------------------------------........--------  10

                                      ---------------->                                  
                                      S  N  G  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8316   271  GCAATGGTTTTGATATATGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  321
J  93.8% (45/48)    IGHJ3*02     3    ---...C.........C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_113734

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCTT	TTCGGGGA	A	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCTTTTCGGGGAAAACTGGTTCAGCCCC	ARRLFGENWFSP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	243	117	103	11	3	88
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	224	22	3	90


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Q  I  W  W  S  W  V  R  Q  A  P  G  K  G  L 
                    Query_8317   1    ACCCTGTCCCTCACCTGCACTGTTTCTGGTGGCTCCATCAGCAGTCAGATCTGGTGGAGTTGGGTCCGCCAGGCCCCAGGGAAGGGGCTT  90
V  90.0% (224/249)  IGHV4-4*02   49   ..................G....C.....................AGT.A......................C................G  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><-----------------------------------------------------
                                       E  W  I  G  E  I  L  H  S  G  S  T  T  T  Y  I  P  S  L  E  S  R  V  T  I  S  I  D  K  S 
                    Query_8317   91   GAGTGGATTGGGGAAATCCTTCATAGCGGGAGCACCACCACTTACATCCCGTCCCTCGAGAGTCGAGTCACCATCTCAATCGACAAGTCC  180
V  90.0% (224/249)  IGHV4-4*02   139  ..................TA......T..........A.---....A..........A................A...G.A.........  225
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N     Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 

                                      FR3-IMGT------------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  R  L  F  G  E  N  W 
                    Query_8317   181  AAGAACCAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCGGACACGGCCATATATTATTGTGCGAGACGTCTTTTCGGGGAAAACTGG  270
V  90.0% (224/249)  IGHV4-4*02   226  ...................A......C........................G.G.....C.........---------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-10*01  13   ---------------------------------------------------------------------------........-------  20
J  93.9% (46/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  S  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8317   271  TTCAGCCCCTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  313
J  93.9% (46/49)    IGHJ5*02     9    ...GA...........A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_113735

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           372     2e-105
IGHD2-15*01                                                                                           19.9    0.15  
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAG	TTGTAGTGGT	AACACCTG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGTTGTAGTGGTAACACCTGCTACTACGAAATGGACGTC	ARVSCSGNTCYYEMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	241	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8318   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.8% (241/244)  IGHV4-59*01  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8318   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGGTAGACACGTCCAAGAAC  180
V  98.8% (241/244)  IGHV4-59*01  139  .......................................................................A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  C  S  G  N  T  C  Y 
                    Query_8318   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTAAGTTGTAGTGGTAACACCTGCTAC  270
V  98.8% (241/244)  IGHV4-59*01  229  ...............................................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD2-15*01  7    --------------------------------------------------------------------..........------------  16
J  96.2% (50/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8318   271  TACGAAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  96.2% (50/52)    IGHJ6*02     15   ....GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_113733

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           324     7e-91
IGHD2-15*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGCCCGCTGCCC	GTGGTGG	GTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATCAGCCCGCTGCCCGTGGTGGGTGCTTTGACTAC	ARDQPAARGGCFDY	237	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	19	5	0	79.2
FR3-IMGT	123	236	114	111	3	0	97.4
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	233	220	13	0	94.4


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  G  H  W  M  H  W  V  R  Q  G  P  G  K  G  L  V  W  V  S  R  I 
                    Query_8319   12   TGTGCAGCCTCTGGATTCACCTTCAGTGGTCACTGGATGCACTGGGTCCGCCAAGGTCCAGGGAAGGGGCTGGTGTGGGTCTCACGCATT  101
V  94.4% (220/233)  IGHV3-74*01  64   ...........................A.CT........................C..............................T...  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       N  T  V  G  S  G  I  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  G  K  N  T  L  Y  L 
                    Query_8319   102  AATACCGTTGGGAGTGGCATAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGGCAAGAACACACTGTATCTG  191
V  94.4% (220/233)  IGHV3-74*01  154  ....GT.A.......A...C..................................................C.........G.........  243
                                       N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 

                                      --------------------------------------------><----------------CDR3-IMGT--------------->   
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Q  P  A  A  R  G  G  C  F  D  Y  W 
                    Query_8319   192  CAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCAAGAGATCAGCCCGCTGCCCGTGGTGGGTGCTTTGACTACTGG  281
V  94.4% (220/233)  IGHV3-74*01  244  .........................................C...........-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (7/7)     IGHD2-15*01  12   -------------------------------------------------------------------.......----------------  18
J  100.0% (44/44)   IGHJ4*02     5    -----------------------------------------------------------------------------.............  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_8319   282  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (44/44)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_113731

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-66*01                                                                                           311     4e-87
IGHD1-1*01                                                                                            14.1    8.1  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-66*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTATGGCCCG	CAACTGG	GTC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTATGGCCCGCAACTGGGTCTTGAGTAC	ARDYGPQLGLEY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	223	24	0	90.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  N  Y  M  S  W  V  R  Q  A  P  G  M  G  L  
                    Query_8320   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAATAACTATATGAGTTGGGTCCGCCAGGCTCCAGGGATGGGGCTGG  90
V  90.3% (223/247)  IGHV3-66*01  47   ......................................G......GC.....C.....C......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  I  Y  S  G  G  G  S  F  Y  T  H  S  V  E  G  R  F  T  I  S  R  D  N  A  E  
                    Query_8320   91   AGTGGGTCTCTCTTATTTACAGCGGTGGTGGCTCCTTCTACACACACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCGAGA  180
V  90.3% (223/247)  IGHV3-66*01  137  ..........AG.......T.........A..A.A.A....G..G........A.....A......................TT..A...  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  G  P  Q  L  G  L  
                    Query_8320   181  ATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTATGGCCCGCAACTGGGTCTTG  270
V  90.3% (223/247)  IGHV3-66*01  227  .CA.G........T.....................................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD1-1*01   5    -----------------------------------------------------------------------------.......------  11
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8320   271  AGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.6% (41/42)    IGHJ4*02     10   .C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_294989

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           304     1e-84
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGGGTCCT	TATAGTGGGAGC	CCGCAAGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACTTC	AKPGPYSGSPQGYFDF	239	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	49	2	0	96.1
CDR2-IMGT	101	124	24	16	8	0	66.7
FR3-IMGT	125	238	114	109	5	0	95.6
CDR3-IMGT (germline)	239	244	6	6	0	0	100
Total	N/A	N/A	230	212	18	0	92.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  T  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I  
                    Query_8321   15   GTGCAGCCTCTGGATTCACCTTTAGCACCTTCGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAACTATTA  104
V  92.2% (212/230)  IGHV3-23*01  65   ...........................G..AT........C..........................................G......  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      T  E  T  G  R  N  S  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  K  N  T  L  Y  L  
                    Query_8321   105  CTGAGACTGGTCGTAATTCATACTACGCAGACTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCAAGAACACACTGTATCTGC  194
V  92.2% (212/230)  IGHV3-23*01  155  G..GT.G....G...GCA............................G....C...............T...........G..........  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  G  P  Y  S  G  S  P  Q  G  Y  F  D  
                    Query_8321   195  AAATGAACACCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACT  284
V  92.2% (212/230)  IGHV3-23*01  245  .........G........................................----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (12/12)   IGHD1-26*01  3    -----------------------------------------------------------............-------------------  14
J  97.8% (45/46)    IGHJ4*02     3    --------------------------------------------------------------------------------..........  12

                                      ->                                  
                                      F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8321   285  TCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  320
J  97.8% (45/46)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_249019

Length=411
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            372     3e-105
IGHD5-18*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCACAGCAAAG	ACAGCTATGGTTA	ACTCGGGACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCACAGCAAAGACAGCTATGGTTAACTCGGGACGACTACTACAATGCTATGGACGTC	ARSQQRQLWLTRDDYYNAMDV	291	353	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	68	3	0	95.8
CDR1-IMGT	78	101	24	17	7	0	70.8
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	19	5	0	79.2
FR3-IMGT	177	290	114	104	10	0	91.2
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	290	264	26	0	91


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  L  S  D  
                    Query_8322   7    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGCGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACGTTAAGCGACC  96
V  91.0% (264/290)  IGHV1-2*04   5    ...................G.........AA................................................C..C.C..G.T  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      H  F  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  K  A  G  G  T  N  Y  A  
                    Query_8322   97   ATTTTATACACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAAGGCAGGCGGCACAAACTATGCGC  186
V  91.0% (264/290)  IGHV1-2*04   95   .C.A...G...........................................................CAGT..T..............A.  184
                                      Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  W  L  A  L  T  R  D  T  S  I  T  T  A  Y  M  E  L  R  G  L  R  S  D  D  T  
                    Query_8322   187  AGAAGTTTCAGGGCTGGCTCGCCCTGACCAGGGACACGTCCATCACCACAGCCTACATGGAGCTGCGTGGCCTGAGATCTGACGACACCG  276
V  91.0% (264/290)  IGHV1-2*04   185  .................G..A..A.....................G...................A.CA.G.................G.  274
                                      Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  

                                      -------------><--------------------------CDR3-IMGT-------------------------->             
                                      A  V  Y  Y  C  A  R  S  Q  Q  R  Q  L  W  L  T  R  D  D  Y  Y  N  A  M  D  V  W  G  Q  G  
                    Query_8322   277  CCGTGTATTACTGTGCGAGATCACAGCAAAGACAGCTATGGTTAACTCGGGACGACTACTACAATGCTATGGACGTCTGGGGCCAAGGGA  366
V  91.0% (264/290)  IGHV1-2*04   275  ....................----------------------------------------------------------------------  294
                                      A  V  Y  Y  C  A  R                                                                       
D  100.0% (13/13)   IGHD5-18*01  7    -------------------------------.............----------------------------------------------  19
J  94.6% (53/56)    IGHJ6*02     7    ------------------------------------------------------........T.C.G.......................  42

                                                          
                                      T  T  V  T  V  S  S 
                    Query_8322   367  CCACGGTCACCGTCTCCTCA  386
J  94.6% (53/56)    IGHJ6*02     43   ....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40288536


Query= Query_207054

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD6-13*01                                                                                           12.2    32   
IGHJ5*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCGCCGACG	GCAGCA	CCACCTTCTTCTTCCCCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCGCCGACGGCAGCACCACCTTCTTCTTCCCCGACTGGTTCGACCCC	ARTADGSTTFFFPDWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  I  S  G  G  S  I  N  K  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8323   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGGCTCCATCAATAAATACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAG  90
V  93.8% (228/243)  IGHV4-59*01  49   .....................G..................G..GT...........C.............................G...  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  P  L  K  S  R  V  T  I  S  L  D  R  S  K  N 
                    Query_8323   91   TGGATAGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCCCCCTCAAGAGTCGAGTCACCATATCACTAGACAGGTCCAAGAAC  180
V  93.8% (228/243)  IGHV4-59*01  139  .....T..G....................................T..........................G......C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  V  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  A  D  G  S  T  T  F  F 
                    Query_8323   181  CAGGTCTCCCTAAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAACCGCCGACGGCAGCACCACCTTCTTC  270
V  93.8% (228/243)  IGHV4-59*01  229  ...T.......G.A.................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-13*01  8    -------------------------------------------------------------------------......-----------  13

                                      -------------------->                                  
                                       F  P  D  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8323   271  TTCCCCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ5*02     4    -------................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_88520

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8324   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8324   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_8324   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8324   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_294981

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*13                                                                                           410     1e-116
IGHD3-3*02                                                                                            12.2    35    
IGHJ6*02                                                                                              117     1e-30 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*13	IGHD3-3*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GATAC	GTGGGTTGGTA	ATTAGC	CCTAG	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGATACGTGGGTTGGTAATTAGCCCTAGTTACTACTACTACTACGGTATGGACGTC	ARIRGLVISPSYYYYYGMDV	263	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	29	1	0	96.7
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	112	2	0	98.2
CDR3-IMGT (germline)	263	272	10	10	0	0	100
Total	N/A	N/A	272	267	5	0	98.2


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R
                    Query_8325   1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACCAGTGGAATGTGTGTGAGCTGGATCCG  90
V  98.2% (267/272)  IGHV2-70*13  30   ...............................................................T..........................  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  G  D  K  Y  Y  S  T  S  L  K  T  R  L  T
                    Query_8325   91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACTCATTGATTGGGATGGTGATAAGTATTACAGTACATCTCTGAAGACCAGGCTCAC  180
V  98.2% (267/272)  IGHV2-70*13  120  ..................................................A......A..C.....C.......................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  I
                    Query_8325   181  CATCTCCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACGTATTATTGTGCACGGAT  270
V  98.2% (267/272)  IGHV2-70*13  210  ..........................................................................................  299
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  I

                                      ------------------CDR3-IMGT------------------------>                                 
                                        R  G  L  V  I  S  P  S  Y  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8325   271  ACGTGGGTTGGTAATTAGCCCTAGTTACTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  355
V  98.2% (267/272)  IGHV2-70*13  300  ..-----------------------------------------------------------------------------------  301
                                                                                                                           
D  100.0% (6/6)     IGHD3-3*02   3    -------------......------------------------------------------------------------------  8
J  100.0% (61/61)   IGHJ6*02     2    ------------------------.............................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_294980

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCAGTGC	TATTACGATTTTTGGAGTGGT	CATC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATCCAGTGCTATTACGATTTTTGGAGTGGTCATCCTACTTCGATATGGACGTC	ARDPVLLRFLEWSSYFDMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  N  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8326   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAACAATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-33*01  47   .............................................G.T...G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  N  D  G  V  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8326   91   AATGGGTGGCAGTTATTTGGAATGATGGAGTTAAAAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCG  180
V  94.4% (236/250)  IGHV3-33*01  137  .G..............A...T........AG...T......................................................A  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      E  N  T  L  Y  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  R  D  P  V  L  L  R  F  
                    Query_8326   181  AGAACACCCTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTATATTACTGTGCGCGAGATCCAGTGCTATTACGATTTT  270
V  94.4% (236/250)  IGHV3-33*01  227  .......G............................C...............G............A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (21/21)   IGHD3-3*01   2    ------------------------------------------------------------------------------............  13

                                      R3-IMGT------------------------>                                 
                                      L  E  W  S  S  Y  F  D  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8326   271  TGGAGTGGTCATCCTACTTCGATATGGACGTCTGGGGCCAAGGGACTACGGTCACCGTCTCCTCA  335
D  100.0% (21/21)   IGHD3-3*01   14   .........--------------------------------------------------------  22
J  94.2% (49/52)    IGHJ6*02     11   -------------.....A..G........................C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_294983

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD3-16*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_8327   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (227/249)  IGHV4-61*01  49   .......................C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S 
                    Query_8327   91   CTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  91.2% (227/249)  IGHV4-61*01  139  ....A.........GT............G......CAC..A.........................G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y 
                    Query_8327   181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTAT  270
V  91.2% (227/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------------.....  28

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_8327   271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
D  100.0% (7/7)     IGHD3-16*02  29   ..--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_294987

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           419     2e-119
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	CCGCCTTCCCTAGCGACACCGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGCCTTCCCTAGCGACACCGGGTACTTTGACTAC	ARAAFPSDTGYFDY	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	111	3	0	97.4
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	294	281	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  D  T  F  T  
                    Query_8328   4    AGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGAGACACCTTCACCA  93
V  95.6% (281/294)  IGHV1-46*01  2    ....G........G........G......................................................T............  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      R  Y  F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  S  G  A  T  K  Y  
                    Query_8328   94   GGTACTTTATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTAGTGGAGCCACAAAATACG  183
V  95.6% (281/294)  IGHV1-46*01  92   .C....A................................................................G....TAG.....GC....  181
                                      S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  I  Y  M  E  L  S  S  L  R  S  E  D  
                    Query_8328   184  CACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAATCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACA  273
V  95.6% (281/294)  IGHV1-46*01  182  .....................................................G....................................  271
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  V  Y  Y  C  A  R  A  A  F  P  S  D  T  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_8328   274  CGGCCGTGTATTACTGTGCGAGAGCCGCCTTCCCTAGCGACACCGGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  363
V  95.6% (281/294)  IGHV1-46*01  272  ........................------------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                    
J  100.0% (46/46)   IGHJ4*02     3    -----------------------------------------------...........................................  45

                                         
                                      S  
                    Query_8328   364  CAG  366
J  100.0% (46/46)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_344635

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           374     9e-106
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCT	TTACTATGATAGTAGTGCTTA	CTATGCCTCTTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCTTTACTATGATAGTAGTGCTTACTATGCCTCTTTCTACGTTCTGGACGTC	ARELYYDSSAYYASFYVLDV	273	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	56	45	42	3	0	93.3
CDR1-IMGT	57	86	30	26	4	0	86.7
FR2-IMGT	87	137	51	51	0	0	100
CDR2-IMGT	138	158	21	17	4	0	81
FR3-IMGT	159	272	114	110	4	0	96.5
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	269	254	15	0	94.4


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  Q  P  S  E  T  L  S  L  T  C  T  V  S  G  G  T  V  S  L  G  S  Y  Y  W  S  W  I  R 
                    Query_8329   12   CTGGTGCAGCCCTCGGAAACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCACCGTCAGTCTTGGTAGTTACTACTGGAGCTGGATCCGG  101
V  94.4% (254/269)  IGHV4-61*01  31   ......A....T.....G.................................T.......CAG............................  120
                                       L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R 

                                      ------FR2-IMGT---------------------><-----CDR2-IMGT-----><--------------------------------
                                       Q  P  P  G  K  G  L  E  W  I  G  Y  V  Y  F  N  G  N  T  N  Y  N  P  S  L  K  S  R  L  T 
                    Query_8329   102  CAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATGTCTATTTCAATGGGAACACCAATTACAACCCCTCCCTCAAGAGTCGACTCACC  191
V  94.4% (254/269)  IGHV4-61*01  121  ....................................A......A..G.....G......C........................G.....  210
                                       Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T 

                                      --------------------FR3-IMGT----------------------------------------------------><--------
                                       I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E 
                    Query_8329   192  ATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGAG  281
V  94.4% (254/269)  IGHV4-61*01  211  .......................................C...............................G.................-  299
                                       I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R    

                                      -----------------CDR3-IMGT------------------------>                                 
                                       L  Y  Y  D  S  S  A  Y  Y  A  S  F  Y  V  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8329   282  CTTTACTATGATAGTAGTGCTTACTATGCCTCTTTCTACGTTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  365
D  95.2% (20/21)    IGHD3-22*01  4    --.................G...-------------------------------------------------------------  24
J  95.9% (47/49)    IGHJ6*02     14   -----------------------------------.....G.A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_281367

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ5*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCGAGG	AGCAGCAGCTGGT	GCGGGGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCGAGGAGCAGCAGCTGGTGCGGGGGACTGGTTCGACCCC	ARGRGAAAGAGDWFDP	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	66	5	0	93
CDR1-IMGT	79	102	24	15	9	0	62.5
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	18	6	0	75
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	296	5	5	0	0	100
Total	N/A	N/A	289	259	30	0	89.6


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  G  G  L  V  R  P  G  G  S  L  R  L  S  C  A  A  S  G  F  N  F  F  S  
                    Query_8330   8    TGCAGCTGGTGCAGTCTGGAGGGGGCCTGGTCAGGCCTGGGGGGTCCCTAAGACTCTCCTGTGCAGCCTCTGGATTCAATTTTTTTAGTT  97
V  89.6% (259/289)  IGHV3-21*01  5    ...........G.......G..A..........A...............G............................CC..CAG...C.  94
                                         Q  L  V  E  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      F  N  L  N  W  V  R  Q  A  P  G  K  G  P  E  W  V  S  S  I  S  S  S  G  T  Y  I  Y  Y  A  
                    Query_8330   98   TTAATCTGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGGAATGGGTCTCATCCATTAGTTCCAGTGGCACTTACATATACTACGCAG  187
V  89.6% (259/289)  IGHV3-21*01  95   A..GCA.................................T...G..................AGT...A.T.G.................  184
                                      Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  V  Y  L  Q  M  N  S  L  S  G  A  D  T  
                    Query_8330   188  ACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCAGTGTATCTACAAATGAACAGCCTGAGCGGCGCGGACACGG  277
V  89.6% (259/289)  IGHV3-21*01  185  ..................................................C.......G.................A.C..A........  274
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  

                                      -------------><-------------------CDR3-IMGT------------------>                            
                                      A  L  Y  F  C  A  R  G  R  G  A  A  A  G  A  G  D  W  F  D  P  W  G  Q  G  T  L  V  I  V  
                    Query_8330   278  CTCTGTATTTCTGTGCGAGGGGCCGAGGAGCAGCAGCTGGTGCGGGGGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCT  367
V  89.6% (259/289)  IGHV3-21*01  275  ..G......A.........-----------------------------------------------------------------------  293
                                      A  V  Y  Y  C  A                                                                          
D  100.0% (13/13)   IGHD6-13*01  7    ----------------------------.............-------------------------------------------------  19
J  97.9% (47/48)    IGHJ5*02     4    ------------------------------------------------....................................C.....  45

                                            
                                      S  S  
                    Query_8330   368  CCTCAG  373
J  97.9% (47/48)    IGHJ5*02     46   ......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_70700

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           319     2e-89
IGHJ2*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	N/A	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TGGCCAAAGGGACGAGGAAA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCCAAAGGGACGAGGAAAACTGGTACATCGATCTC	ARDGQRDEENWYIDL	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  R  D  P  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8331   1    GGTCCCTGAGACTCTCCTGTGTTGCCTCTGGATTCAGCTTCAGAGACCCTGGCATGCACTGGGTCCGCCAGGCTCCCGGCAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-30*03  47   .....................CA.............C......TAG.TA...........................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  D  G  R  D  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  F  
                    Query_8331   91   AATGGGTGGCACTTATATCATATGACGGAAGGGATAAATATTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTTCA  180
V  90.8% (227/250)  IGHV3-30*03  137  .G.........G.............T.....TA.......C....C.........................................C..  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  D  S  L  K  P  E  D  T  A  V  Y  Y  C  A  R  D  G  Q  R  D  E  E  
                    Query_8331   181  AGAACACACTGTATCTACAAATGGACAGCCTGAAACCTGAGGACACGGCTGTCTATTACTGTGCGAGAGATGGCCAAAGGGACGAGGAAA  270
V  90.8% (227/250)  IGHV3-30*03  227  .......G........G......A.........G.G................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ---------------->                                  
                                      N  W  Y  I  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_8331   271  ACTGGTACATCGATCTCTGGGGCCGGGGCACCCTGGTCGCTGTCTCCTCAG  321
J  94.1% (48/51)    IGHJ2*01     3    ........T................T............A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_344636

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           307     1e-85
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGACTAG	TGGAACGAC	TCTTGTGT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGACTAGTGGAACGACTCTTGTGTACTGGTTCGACCCC	ARTSGTTLVYWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	218	22	0	90.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  N  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  Q  L  E 
                    Query_8332   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAATACCTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAACAACTGGAG  90
V  90.8% (218/240)  IGHV4-59*08  49   ..................A.....................G..GT...................................GGG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  A  T  Y  S  P  S  L  K  S  R  V  T  M  S  I  D  T  S  K  N 
                    Query_8332   91   TGGATTGGTTATATCTCTTACAGTGGGAGCGCCACTTATAGCCCCTCCCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCCAAGAAC  180
V  90.8% (218/240)  IGHV4-59*08  139  ........G.......A.............A...AC..C.A...........................A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  T  S  G  T  T  L  V  Y  W 
                    Query_8332   181  CAGTTCTCCCTGAGGCTGACGTCCGTGACCGCCGCAGACACGGCCATTTATTACTGTGCGCGGACTAGTGGAACGACTCTTGTGTACTGG  270
V  90.8% (218/240)  IGHV4-59*08  229  .............A.....GC..T.....................G.G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD1-1*01   9    --------------------------------------------------------------------.........-------------  17
J  95.8% (46/48)    IGHJ5*02     4    -------------------------------------------------------------------------------------.....  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  I  L  V  A  V  S  S  
                    Query_8332   271  TTCGACCCCTGGGGCCAGGGAATCCTGGTCGCCGTCTCCTCAG  313
J  95.8% (46/48)    IGHJ5*02     9    ......................C.......A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_344631

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD3-3*01                                                                                            12.2    31   
IGHJ3*01                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCT	TTACGA	GGGGCTAACTTTTCCTT	TCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCTTTACGAGGGGCTAACTTTTCCTTTC	ARDLYEGLTFPF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8333   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTTCTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  91.0% (223/245)  IGHV4-59*01  49   ..........................................AG.....A........................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  N  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  N  S 
                    Query_8333   91   TGGCTAGGATATATCAATTACACTGGGAGTACCAACTACAATCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAACAGC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A.T..G......T......G......C...........C..................G.........................G.A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  E  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  Y  E  G  L  T  F  P 
                    Query_8333   181  CAATTCTCCCTGGAGTTGTCTTCTGTGACCGCTGCGGACACGGCCGTGTACTATTGTGCGAGAGACCTTTACGAGGGGCTAACTTTTCCT  270
V  91.0% (223/245)  IGHV4-59*01  229  ..G.........A..C..AGC.............................T..C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-3*01   4    --------------------------------------------------------------------......----------------  9

                                      -->                                  
                                       F  W  G  P  G  T  M  V  T  V  S  S  
                    Query_8333   271  TTCTGGGGCCCAGGGACAATGGTCACCGTCTCCTCAG  307
J  94.4% (34/36)    IGHJ3*01     15   -.........A.....................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_344630

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           322     2e-90
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_8334   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_8334   91   CTAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-61*08  139  ..G..................T..T................C.................G.......TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N 
                    Query_8334   181  AGGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAAC  270
V  91.2% (228/250)  IGHV4-61*08  229  .A.................A.....GC..........................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G..G.....G.  22

                                      3-IMGT----------------------->                                  
                                       C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8334   271  TGCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  86.4% (19/22)    IGHD2-15*01  23   ......----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_70704

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           425     3e-121
IGHD5-12*01                                                                                           16.1    2.6   
IGHJ2*01                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAC	GGATGAGAGA	TGGCTACAATT	TTGTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACGGATGAGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTC	ATRMRDGYNFVDWYFDL	292	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	109	5	0	95.6
CDR3-IMGT (germline)	292	298	7	6	1	0	85.7
Total	N/A	N/A	294	283	11	0	96.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  N  F  A  
                    Query_8335   5    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAACTTTGCCA  94
V  96.3% (283/294)  IGHV5-51*01  2    ..G..................................................................G...........G....A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_8335   95   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACA  184
V  96.3% (283/294)  IGHV5-51*01  92   G...................................................................................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  H  W  S  S  L  Q  A  S  D  
                    Query_8335   185  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCACTGGAGTAGCCTCCAGGCCTCGGACA  274
V  96.3% (283/294)  IGHV5-51*01  182  ................................................................G.....C.....GA............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  M  Y  Y  C  A  T  R  M  R  D  G  Y  N  F  V  D  W  Y  F  D  L  W  G  R  G  T  L  V  
                    Query_8335   275  CCGCCATGTATTACTGTGCGACACGGATGAGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCA  364
V  96.3% (283/294)  IGHV5-51*01  272  .....................G..------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  90.9% (10/11)    IGHD5-12*01  11   ----------------------------------.......G...---------------------------------------------  21
J  100.0% (51/51)   IGHJ2*01     3    ---------------------------------------------------.......................................  41

                                                  
                                      T  V  S  S  
                    Query_8335   365  CTGTCTCCTCAG  376
J  100.0% (51/51)   IGHJ2*01     42   ............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_344632

Length=413
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           397     8e-113
IGHD3-9*01                                                                                            41.1    8e-08 
IGHJ6*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGGAACCTCGGAGACG	ATTACGATATTTTGACTGGTT	CCATTTTAG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGGAACCTCGGAGACGATTACGATATTTTGACTGGTTCCATTTTAGACTTCGGTATGGACGTA	ARDGNLGDDYDILTGSILDFGMDV	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  R  N  Y 
                    Query_8336   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGCTACACCTTTAGGAACTAT  91
V  93.8% (272/290)  IGHV1-18*01  7    .................................................A.....................T..........CC.G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  E 
                    Query_8336   92   GGTATTAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAACTATGCAGAG  181
V  93.8% (272/290)  IGHV1-18*01  97   .....C..C....................................................C.........................C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  S  T  D  T  S  T  S  T  S  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_8336   182  AAGTTCCAAGGCAGGGTCACCATGAGCACTGACACATCCACGAGCACGTCCTACATGGAGCTGCGGAGCCTGAGATCTGACGACACGGCC  271
V  93.8% (272/290)  IGHV1-18*01  187  ...C....G.....A..........C...A.................AG..............A..........................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------------CDR3-IMGT------------------------------>      
                                       V  Y  F  C  A  R  D  G  N  L  G  D  D  Y  D  I  L  T  G  S  I  L  D  F  G  M  D  V  W  G 
                    Query_8336   272  GTGTATTTCTGTGCGAGAGACGGGAACCTCGGAGACGATTACGATATTTTGACTGGTTCCATTTTAGACTTCGGTATGGACGTATGGGGC  361
V  93.8% (272/290)  IGHV1-18*01  277  .......A............----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (21/21)   IGHD3-9*01   3    -------------------------------------.....................--------------------------------  23
J  94.0% (47/50)    IGHJ6*02     13   -------------------------------------------------------------------...A............C......  35

                                                                 
                                       Q  G  T  T  V  I  V  S  S 
                    Query_8336   362  CAAGGGACCACGGTCATCGTCTCCTCA  388
J  94.0% (47/50)    IGHJ6*02     36   ................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40498920


Query= Query_70708

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           333     1e-93
IGHD2-8*02                                                                                            14.1    8.5  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TATTG	CC	GTGGTGT	TAATTATGACAGTGATGATTTTACTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CGTGGTGTTAATTATGACAGTGATGATTTTACTTGGTACTTCGACTTC	RGVNYDSDDFTWYFDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	241	113	106	7	0	93.8
Total	N/A	N/A	241	227	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  V  F  S  N  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8337   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCGTCTTCAGTAACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.2% (227/241)  IGHV3-33*01  47   ...................................AC........G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  T  T  K  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_8337   91   AGTGGGTGGCAGTTATATGGTATGATGGAACTACTAAGTATTATGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.2% (227/241)  IGHV3-33*01  137  ..............................G..A...A..C................A................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  V  Y  L  Q  M  D  S  L  R  A  E  D  T  A  L  Y  Y  C  R  G  V  N  Y  D  S  D  D  
                    Query_8337   181  AGAACACCGTGTATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCTCTGTATTATTGCCGTGGTGTTAATTATGACAGTGATGATT  270
V  94.2% (227/241)  IGHV3-33*01  227  .......GC..............A..........................G.......C..-----------------------------  287
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                
D  100.0% (7/7)     IGHD2-8*02   15   ---------------------------------------------------------------.......--------------------  21

                                      T------------------>                                  
                                      F  T  W  Y  F  D  F  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_8337   271  TTACTTGGTACTTCGACTTCTGGGGCCAGGGGACCCTGGTCATCGTCTCCTCAG  324
J  91.3% (42/46)    IGHJ4*02     3    --------.....T....A............A..........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_70709

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           377     1e-106
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	ARPSSASGWHFDN	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	265	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_8338   1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCAGTTA  90
V  91.7% (265/289)  IGHV5-51*03  6    .........................G.............G.........................G.........C.GC..T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  D  I  R  Y  S  P
                    Query_8338   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGATATTAGATATAGTCC  180
V  91.7% (265/289)  IGHV5-51*03  96   C.......G..................................................AT...GG...........CC.....C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  G
                    Query_8338   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGG  270
V  91.7% (265/289)  IGHV5-51*03  186  .............................C..A.AA........G............................................C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8338   271  CATGTATTACTGTGCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  91.7% (265/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_344639

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  H
                    Query_8339   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATCA  90
V  92.4% (268/290)  IGHV5-51*01  6    ....................C........A.....................G.........A......C.........C.......GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  P
                    Query_8339   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCCC  180
V  92.4% (268/290)  IGHV5-51*01  96   ...................................................G.......A.....G.......G....C.....C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  A
                    Query_8339   181  GTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCGC  270
V  92.4% (268/290)  IGHV5-51*01  186  ...............G........C...................................G.......G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_8339   271  CTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  350
V  92.4% (268/290)  IGHV5-51*01  276  .A.......C.....G....------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    -----------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_68350

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           353     1e-99
IGHD6-19*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AATTTACCTGG	ATAGCAGTGG	TAATCCTCAGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAATTTACCTGGATAGCAGTGGTAATCCTCAGGACGGTATGGACGTC	AREIYLDSSGNPQDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8340   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-21*01  47   .....................................C......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  N  D  N  A  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8340   91   AGTGGGTCTCATCCATTAGTAATGATAATGCTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-21*01  137  .....................G.AG..G.AG...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  R  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  I  Y  L  D  S  S  
                    Query_8340   181  AGAACTCACTGTATCTGCGAATGAACAGCCTGAGAGCCGACGACACGGCTGTTTATTACTGTGCGAGAGAAATTTACCTGGATAGCAGTG  270
V  95.2% (238/250)  IGHV3-21*01  227  ..................A.....................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD6-19*01  5    ---------------------------------------------------------------------------------.........  13

                                      IMGT--------------------->                                 
                                      G  N  P  Q  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8340   271  GTAATCCTCAGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (10/10)   IGHD6-19*01  14   .----------------------------------------------------------  14
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_68351

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         329     3e-92
IGHD2-2*02                                                                                            29.5    2e-04
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	GGATATTGTAGGGGTATCAGGTGCTTTACC	GGGGTAG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGGATATTGTAGGGGTATCAGGTGCTTTACCGGGGTAGGGTTCGACCCC	AREGYCRGIRCFTGVGFDP	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	56	30	25	2	3	83.3
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	21	0	0	100
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	15	3	92.8


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  S  V  S  G  D  S  I  S  S  G     Y  S  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_8341     4    CCCTGAGACTCTCCTGCTCTGTCTCTGGTGACTCCATCAGCAGTGGG---TACTCCTGGAGCTGGATCCGGCAGCCACCGGGGAAGGGCC  90
V  92.8% (232/250)  IGHV4-30-2*01  50   .....TCC...A.....G............G...............TGGT.............................A..........  139
                                           L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  R  S  
                    Query_8341     91   TGGAGTGGATTGGGTACATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCATTAGACAGGTCCA  180
V  92.8% (232/250)  IGHV4-30-2*01  140  .........................................................................A...G............  229
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                        T  N  Q  V  S  L  K  L  R  S  G  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  Y  C  R  G  I  
                    Query_8341     181  CGAACCAGGTCTCCCTGAAGCTGAGGTCTGGGACCGCCGCGGACACGGCCGTGTACTACTGTGCCAGAGAGGGATATTGTAGGGGTATCA  270
V  92.8% (232/250)  IGHV4-30-2*01  230  A.......T................C....T........................T..............--------------------  299
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  83.3% (25/30)    IGHD2-2*02     2    -----------------------------------------------------------------------...........TA...C..  20

                                        -IMGT----------------------->                                  
                                        R  C  F  T  G  V  G  F  D  P  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_8341     271  GGTGCTTTACCGGGGTAGGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  333
D  83.3% (25/30)    IGHD2-2*02     21   .C....A....----------------------------------------------------  31
J  97.8% (44/45)    IGHJ5*02       7    ------------------................................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_68354

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           371     7e-105
IGHD3-10*01                                                                                           18.0    0.59  
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTAT	CAATTAGACT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATCAATTAGACTACTACTTTGACTAC	ARGLYYYQLDYYFDY	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	243	6	0	97.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  T  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_8342   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCACCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  97.6% (243/249)  IGHV4-31*02  50   .....TCC...A........................T...C.................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_8342   94   TGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  97.6% (243/249)  IGHV4-31*02  140  ..........................................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  Q  L  
                    Query_8342   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCTCTATTACTATCAATTAG  273
V  97.6% (243/249)  IGHV4-31*02  230  .....................................................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD3-10*01  2    --------------------------------------------------------------------------.........-------  10

                                      ---------------->                                  
                                      D  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8342   274  ACTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (48/48)   IGHJ4*02     1    ---................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_68355

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGTGG	AGCAATGGCTGG	GGAACATACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGTGGAGCAATGGCTGGGGAACATACTATAATTACGGCATGGACGCC	ARGHRWSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	44	6	0	88
CDR1-IMGT	51	80	30	21	3	6	70
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	16	5	0	76.2
FR3-IMGT	153	266	114	107	7	0	93.9
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	241	27	6	88


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  P  F  T  D  S  G  Y  Y  W  N  W  
                    Query_8343   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACTTGCGCTGTGTACGGTGGGCCCTTCACTGACAGTGGTTATTATTGGAACTGGT  90
V  88.0% (241/274)  IGHV4-34*01  26   ........T.......T............T.......C........C..T......T......------.......C..C....G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  
                    Query_8343   91   GCCGCCAGCCACCAGGGAAGGGCTTGGAGTGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAACCCGTCCCTCCAGAGTCGAG  180
V  88.0% (241/274)  IGHV4-34*01  110  T.........C...........GC..................T..A....AG.....G......................A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  I  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_8343   181  TCACCATATCAATAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTATATTATTGTGCGA  270
V  88.0% (241/274)  IGHV4-34*01  200  ...........G...............................GC............C..................G.....C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  W  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_8343   271  GAGGCCACCGGTGGAGCAATGGCTGGGGAACATACTATAATTACGGCATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.0% (241/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_68356

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.043
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8344   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8344   91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_8344   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8344   271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_68357

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           308     4e-86
IGHD3-10*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GATATATGGGG	TCGGGAAGTTATTAT	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGATATATGGGGTCGGGAAGTTATTATCTTGACTTC	ARGYMGSGSYYLDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	223	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  R  R  Y  W  I  H  W  V  R  Q  T  P  E  N  G  L  
                    Query_8345   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTCAGAAGGTACTGGATTCACTGGGTCCGCCAAACTCCAGAGAATGGCCTGG  90
V  89.6% (223/249)  IGHV3-74*01  47   ........................C..................T..C........G...............G......G...G..G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  S  Y  V  I  S  G  G  S  K  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  G  
                    Query_8345   91   CGTGGGTCTCATATGTTATTAGTGGCGGGAGTAAGACAACCTATGCGGACTCCGTTAAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  89.6% (223/249)  IGHV3-74*01  137  T..........CG.A...A.....AT.......GC....G...C...........G...............................C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  V  Y  L  Q  M  N  N  L  R  A  E  D  T  A  I  Y  Y  C  A  R  G  Y  M  G  S  G  S  
                    Query_8345   181  AGAACACGGTGTATCTGCAAATGAACAATCTGAGAGCCGAGGACACGGCTATATATTATTGTGCAAGAGGATATATGGGGTCGGGAAGTT  270
V  89.6% (223/249)  IGHV3-74*01  227  ........C..................G......................G.G.....C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD3-10*01  14   --------------------------------------------------------------------------------.....G....  23

                                      ------------->                                  
                                      Y  Y  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8345   271  ATTATCTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  93.3% (14/15)    IGHD3-10*01  24   .....-------------------------------------------  28
J  97.6% (41/42)    IGHJ4*02     7    ------......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_68358

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_8346   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_8346   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_8346   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_8346   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_68359

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           257     1e-70
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	41	10	0	80.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	93	21	0	81.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	204	40	0	83.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_8347   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  83.6% (204/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  D  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_8347   91   TGGCTTGACTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  83.6% (204/244)  IGHV4-59*01  139  ...A...GG.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_8347   181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACGTAT  270
V  83.6% (204/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_8347   271  GTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    ---------------------------------...G....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_278044

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTA	GGGTATAGTAGTGGCGGGTAC	TATGACAAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTAGGGTATAGTAGTGGCGGGTACTATGACAAATTTGACTAC	AKDVGYSSGGYYDKFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8348   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGGCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ...............................................T...C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  G  S  G  S  I  R  E  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8348   91   AGTGGGTCTCAAGTGTTAGTGGAAGTGGTAGTATCAGAGAATACGCAGAATCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  ...........GC.A.......T......G...G..C.T.C........C........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  V  G  Y  S  S  G  
                    Query_8348   181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTATTGTGCGAAAGATGTAGGGTATAGTAGTGGCG  270
V  94.0% (235/250)  IGHV3-23*01  227  ..............C.....................................A.....C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.5% (19/21)    IGHD6-19*01  1    --------------------------------------------------------------------------........C......T  16

                                      GT-------------------->                                  
                                      G  Y  Y  D  K  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8348   271  GGTACTATGACAAATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  90.5% (19/21)    IGHD6-19*01  17   .....----------------------------------------------------  21
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_35201

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGAAGGG	TTACCATTTTTGGAGTGGTT	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGAAGGGTTACCATTTTTGGAGTGGTTCTTTGAGTAC	AKDEGLPFLEWFFEY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  I  F  S  D  Y  A  T  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8349   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCATCTTTAGCGACTATGCCACGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-23*01  47   .....................C..............C.......AG........T...................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  T  I  G  G  T  D  G  D  T  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  S  
                    Query_8349   91   AGTGGGTCGCAACTATCGGTGGTACTGATGGTGACACATACTACGCAGACTCTGTGGAGGGTCGGTTCACCATCTCCAGAGACAATTCCA  180
V  90.8% (227/250)  IGHV3-23*01  137  ........T..G....TA......G..G....AG..................C...A....C............................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  M  D  D  T  A  V  Y  Y  C  A  K  D  E  G  L  P  F  L  
                    Query_8349   181  AGAACACACTCTATCTGCAAATGAACAGCCTGAGGATGGACGACACGGCCGTATATTACTGTGCGAAAGATGAAGGGTTACCATTTTTGG  270
V  90.8% (227/250)  IGHV3-23*01  227  .......G..G.......................AGCC..G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.0% (19/20)    IGHD3-3*01   4    -----------------------------------------------------------------------------....G........  16

                                      ---------------->                                  
                                      E  W  F  F  E  Y  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_8349   271  AGTGGTTCTTTGAGTACTGGGGCCAGGGAACCGTGGTCACCGTCTCCTCAG  321
D  95.0% (19/20)    IGHD3-3*01   17   .......--------------------------------------------  23
J  95.5% (42/44)    IGHJ4*02     5    -------......C..................C..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_69087

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            403     9e-115
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	269	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	154	27	27	0	0	100
FR3-IMGT	155	268	114	113	1	0	99.1
CDR3-IMGT (germline)	269	275	7	7	0	0	100
Total	N/A	N/A	274	266	8	0	97.1


Alignments

                                     <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                      L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  I  R 
                    Query_8350  2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGATCAGG  91
V  97.1% (266/274)  IGHV6-1*01  31   ........G...T.G.......................................G......G....AG......................  120
                                      L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                     ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                      Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 
                    Query_8350  92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGA  181
V  97.1% (266/274)  IGHV6-1*01  121  ..........................................................................................  210
                                      Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                     --------------------------FR3-IMGT----------------------------------------------------><--
                                      I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_8350  182  ATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCA  271
V  97.1% (266/274)  IGHV6-1*01  211  .........A................................................................................  300
                                      I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                     --------CDR3-IMGT--------->                                  
                                      R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8350  272  AGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  332
V  97.1% (266/274)  IGHV6-1*01  301  ....---------------------------------------------------------  304
                                      R                                                           
J  97.9% (46/47)    IGHJ3*02    4    --------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_311988

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD1-26*01                                                                                           10.3    120  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	T	TATAG	ATTTCAAAGCAATGAACCCCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATTATAGATTTCAAAGCAATGAACCCCTCTTTGACTAC	AKDYRFQSNEPLFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  R  G  L  
                    Query_8351   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   .............................................G...................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  I  E  S  G  G  D  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8351   91   AGTGGGTCTCAGGTATAATTGAAAGTGGTGGTGACACGTACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-23*01  137  ............C...T.G..GT.........AG...A......G.............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  D  E  D  T  A  F  Y  Y  C  A  K  D  Y  R  F  Q  S  N  
                    Query_8351   181  AGAACACCCTGTATCTCCAAATGAACAGCCTCAGAGACGAGGACACGGCCTTTTATTACTGTGCGAAGGATTATAGATTTCAAAGCAATG  270
V  92.8% (232/250)  IGHV3-23*01  227  .......G........G..............G....C.............G.A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD1-26*01  3    -----------------------------------------------------------------------.....--------------  7

                                      ---------------->                                  
                                      E  P  L  F  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_8351   271  AACCCCTCTTTGACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  321
J  97.7% (43/44)    IGHJ4*02     5    -------..........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_69084

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           282     3e-78
IGHD5-12*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	GATACAGTGG	GGCCCCATCTGGGGAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGTGGGGCCCCATCTGGGGAATTTGACTAT	ARYSGAPSGEFDY	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	24	15	6	3	62.5
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	243	4	4	0	0	100
Total	N/A	N/A	246	215	28	3	87.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  A  Y  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8352   1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCACCTTTGCCTACTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.4% (215/246)  IGHV3-23*01  47   .......................G.................AG.AG............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  *  V  S  T  I  T  S     D  G  H  T  F  H  A  D  P  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8352   91   AGTGAGTCTCAACTATTACTTCT---GATGGTCACACATTCCACGCGGACCCCGTAAAGGGCCGCTTCACCATCTCCAGAGACAATTCCA  177
V  87.4% (215/246)  IGHV3-23*01  137  ....G......G......G.GG.AGT.G....AG.....A.T....A...T....G........G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  F  C  A  R  Y  S  G  A  P  S  G  
                    Query_8352   178  AGAATACTCTGTATCTCCAAATGAACAGCCTCAGAGCCGACGACACGGCCGTCTACTTCTGTGCGAGATACAGTGGGGCCCCATCTGGGG  267
V  87.4% (215/246)  IGHV3-23*01  227  ....C..G........G..............G........G...........A..T.A........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.0% (9/10)     IGHD5-12*01  4    ------------------------------------------------------------------....T.....--------------  13

                                      ---------->                                  
                                      E  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8352   268  AATTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.7% (42/43)    IGHJ4*02     6    --........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_69083

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           363     1e-102
IGHD3-16*01                                                                                           14.1    8.0   
IGHJ4*02                                                                                              60.3    2e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	CGAGG	GTTTGGG	CTTT	GGCCA	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	244	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  V  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8353   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTACGTCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.3% (244/256)  IGHV3-15*01  47   .......T.............................T......A...C.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      G  W  V  G  R  I  K  S  K  S  D  G  G  T  T  D  Y  T  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_8353   91   GGTGGGTTGGCCGTATTAAAAGCAAAAGTGATGGTGGGACAACAGACTACACTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  95.3% (244/256)  IGHV3-15*01  137  A..........................C......................G.......................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT---------------------------------------------------->                      
                                      D  S  N  S  T  L  F  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  D  E  G  L  G  
                    Query_8353   181  ATTCAAACAGCACGCTGTTTCTGCAAATGAACAGCCTAAAAACCGAGGACACGGCCGTGTATTACTGTACCACAGACGAGGGTTTGGGCT  270
V  95.3% (244/256)  IGHV3-15*01  227  .......A.A........A..................G..............A.......................--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (7/7)     IGHD3-16*01  14   ---------------------------------------------------------------------------------.......--  20

                                                                       
                                      F  G  Q  G  T  L  V  T  V  S  S  
                    Query_8353   271  TTGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (31/31)   IGHJ4*02     18   --...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_281361

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           385     4e-109
IGHD2-21*02                                                                                           10.3    123   
IGHJ6*02                                                                                              114     2e-29 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAAAA	GTGAC	CCGCAAAC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAAAAGTGACCCGCAAACACTACTACTACTACGGTATGGACGTC	ATKVTRKHYYYYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	246	0	0	100


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                     Query_8354   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  100.0% (246/246)  IGHV3-23*01  47   ..........................................................................................  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                     Query_8354   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  100.0% (246/246)  IGHV3-23*01  137  ..........................................................................................  226
                                       E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                       K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  K  V  T  R  K  H  Y  
                     Query_8354   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGACAAAAGTGACCCGCAAACACTACT  270
V  100.0% (246/246)  IGHV3-23*01  227  ..................................................................------------------------  292
                                       K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)      IGHD2-21*02  15   -----------------------------------------------------------------------.....--------------  19
J  100.0% (59/59)    IGHJ6*02     4    ------------------------------------------------------------------------------------......  9

                                       T------------------>                                 
                                       Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                     Query_8354   271  ACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  100.0% (59/59)    IGHJ6*02     10   .....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_69081

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           357     1e-100
IGHD3-10*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTATCGTTCGGGGACTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATCGTTCGGGGACTTATTTTGACTAC	ARGLYYYRSGTYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  H  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_8355   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.6% (239/250)  IGHV4-31*03  49   ..................A................................T.........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  T  R  I  T  I  S  V  D  T  S 
                    Query_8355   91   CTGGAGTGGATTGGGCACATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGACTCGAATTACCATATCAGTAGACACCTCC  180
V  95.6% (239/250)  IGHV4-31*03  139  ...............T..........C..................................G....G...................G..T  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  R  S 
                    Query_8355   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCTATTACTATCGTTCG  270
V  95.6% (239/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (22/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------.........G.....  16

                                      ----------------->                                  
                                       G  T  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8355   271  GGGACTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  91.7% (22/24)    IGHD3-10*01  17   ....G....-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    ---------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_69080

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            353     9e-100
IGHD6-19*01                                                                                           25.7    0.003 
IGHJ5*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTGGTGGGGGTTGT	CAGTGGCTGGTAC	GGACCGCTT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGGTGGGGGTTGTCAGTGGCTGGTACGGACCGCTTGACCTC	ARLVGVVSGWYGPLDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  Y  S  F  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8356   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTATAGTTTCTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (237/248)  IGHV3-7*01   47   .......................................T....AG............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  K  Q  D  G  T  E  K  Y  Y  V  D  S  V  K  G  R  F  T  L  S  R  D  N  A  
                    Query_8356   91   AGTGGGTGGCCAGCATTAAGCAAGATGGAACTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCCTTTCCAGAGACAACGCCA  180
V  95.6% (237/248)  IGHV3-7*01   137  ............A...A.............G........................................A.C................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  L  V  G  V  V  S  G  
                    Query_8356   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCTGTTTATTACTGTGCGAGATTGGTGGGGGTTGTCAGTGGCT  270
V  95.6% (237/248)  IGHV3-7*01   227  ........................................G...........G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD6-19*01  9    ----------------------------------------------------------------------------------........  16

                                      T------------------>                                  
                                      W  Y  G  P  L  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8356   271  GGTACGGACCGCTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (13/13)   IGHD6-19*01  17   .....-------------------------------------------------  21
J  97.5% (39/40)    IGHJ5*02     12   --------------....C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_311981

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         268     6e-74
IGHD2-15*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GGAGAGGGTTGTCGCGCTTCTGCAGTGCG	GGTAGCTGC	GAACTGTC	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGGGAGAGGGTTGTCGCGCTTCTGCAGTGCGGGTAGCTGCGAACTGTCCGGTATGGACGTC	ATGRGLSRFCSAGSCELSGMDV	246	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	23	7	0	76.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	95	19	0	83.3
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	249	210	39	0	84.3


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  V  V  S  G  V  S  I  T  S  G  T  S  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_8357     4    CCCTGAGACTCTCCTGCGTTGTCTCTGGTGTCTCCATTACCAGTGGGACTTCCTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGTC  93
V  84.3% (210/249)  IGHV4-30-4*01  50   .....TCC...A.....AC...........G......C.G......TGA..A....................................C.  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  N  I  H  H  S  G  N  T  Y  Y  S  P  S  L  K  S  R  I  S  I  S  I  N  N  S  
                    Query_8357     94   TGGAGTGGATTGGGAACATCCATCACAGCGGGAACACCTACTACAGCCCGTCCCTCAAGAGTCGAATTAGTATATCCATAAATAACTCCA  183
V  84.3% (210/249)  IGHV4-30-4*01  140  ..............T.....T..T....T....G...........A...................G...CC.....AG..G.C.CG....  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><---------------------------
                                        K  N  Q  V  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  R  G  L  S  R  F  
                    Query_8357     184  AAAATCAGGTCTCCCTGAACCTGAACTCTGTAACAGCCGCGGACACGGCCGTGTATTATTGTGCCACAGGGAGAGGGTTGTCGCGCTTCT  273
V  84.3% (210/249)  IGHV4-30-4*01  230  .G..C...T..........G....G......G..T.....A.................C.......G..---------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       

                                        -CDR3-IMGT--------------------------->                                 
                                        C  S  A  G  S  C  E  L  S  G  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_8357     274  GCAGTGCGGGTAGCTGCGAACTGTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  344
D  100.0% (9/9)     IGHD2-15*01    17   --------.........------------------------------------------------------  25
J  97.8% (45/46)    IGHJ6*02       17   -------------------------..................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_311980

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     8e-121
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGGACAC	TGTAGTAGTGCCATCTGCGATG	GACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTAC	ARHMGHCSSAICDGPDY	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	70	4	0	94.6
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	110	4	0	96.5
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	283	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  Q  K  P  G  E  A  L  K  I  S  C  K  G  S  G  Y  S  F  G  
                    Query_8358   3    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGCAAAAGCCGGGGGAGGCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCA  92
V  95.9% (283/295)  IGHV5-51*01  2    ....G...........................A.......C......T......................................AC..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_8358   93   GTTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  182
V  95.9% (283/295)  IGHV5-51*01  92   .C..........G.............................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  
                    Query_8358   183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACA  272
V  95.9% (283/295)  IGHV5-51*01  182  .................................C.........C.....C...........................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  M  Y  Y  C  A  R  H  M  G  H  C  S  S  A  I  C  D  G  P  D  Y  W  G  Q  G  T  L  V  
                    Query_8358   273  CCGCCATGTATTACTGTGCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTACTGGGGCCAGGGAACCCTGGTCA  362
V  95.9% (283/295)  IGHV5-51*01  272  .........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  86.4% (19/22)    IGHD2-2*01   8    -----------------------------------.........A...G....T...---------------------------------  29
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------.............................  36

                                                  
                                      T  V  S  S  
                    Query_8358   363  CCGTCTCCTCAG  374
J  100.0% (41/41)   IGHJ4*02     37   ............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_310141

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           408     4e-116
IGHD5-12*01                                                                                           14.1    9.9   
IGHJ3*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTCCGTCTCGTAGAGATGC	CTACAATTAC	CGGACCACC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTCCGTCTCGTAGAGATGCCTACAATTACCGGACCACCGATGCTTTTGATATC	ARDRPSRRDAYNYRTTDAFDI	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  T  V  S  C  K  A  S  G  G  T  F  S  S  F
                    Query_8359   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGACGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTT  90
V  94.8% (276/291)  IGHV1-69*01  6    ..................G...............................A......................................A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        I  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  F  I  P  T  F  G  T  T  N  S  A  Q
                    Query_8359   91   TATTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGTTCATCCCTACCTTTGGCACAACAAACTCCGCACA  180
V  94.8% (276/291)  IGHV1-69*01  96   .GC....................................................A.........T......T...G......A......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  V  S  T  S  T  A  Y  M  V  L  S  S  L  T  S  A  D  T  A
                    Query_8359   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGTTTCCACGAGCACAGCCTACATGGTGCTGAGCAGCCTGACATCTGCGGACACGGC  270
V  94.8% (276/291)  IGHV1-69*01  186  ...................................AA......................A..............G.....A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        V  Y  Y  C  A  R  D  R  P  S  R  R  D  A  Y  N  Y  R  T  T  D  A  F  D  I  W  G  Q  G  T
                    Query_8359   271  CGTGTATTACTGTGCGAGAGATCGTCCGTCTCGTAGAGATGCCTACAATTACCGGACCACCGATGCTTTTGATATCTGGGGCCAAGGGAC  360
V  94.8% (276/291)  IGHV1-69*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  90.0% (9/10)     IGHD5-12*01  14   ------------------------------------------....G.....--------------------------------------  23
J  100.0% (49/49)   IGHJ3*02     2    -------------------------------------------------------------.............................  30

                                                          
                                        M  V  T  V  S  S  
                    Query_8359   361  AATGGTCACCGTCTCTTCAG  380
J  100.0% (49/49)   IGHJ3*02     31   ....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_311984

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD2-8*02                                                                                            14.1    9.7   
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGT	TACTGGT	ACCAACGCCAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTC	ARLVTGTNATYGLDV	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	24	0	0	100
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	112	2	0	98.2
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	286	7	0	97.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_8360   5    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCA  94
V  97.6% (286/293)  IGHV5-51*03  2    ..G..................................................................G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  R  M  G  I  I  Y  P  G  D  S  D  A  R  Y  
                    Query_8360   95   GCTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGAGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACA  184
V  97.6% (286/293)  IGHV5-51*03  92   ............G..................................T................................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_8360   185  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  97.6% (286/293)  IGHV5-51*03  182  .......................................A.........C........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  Y  C  A  R  L  V  T  G  T  N  A  T  Y  G  L  D  V  W  G  Q  G  S  K  V  T  V  
                    Query_8360   275  CCGCCATGTATTACTGTGCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTCTGGGGCCAAGGGAGCAAGGTCACCGTCT  364
V  97.6% (286/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD2-8*02   10   ----------------------------.......-------------------------------------------------------  16
J  93.9% (46/49)    IGHJ6*02     14   ----------------------------------------------.......A.....................C..C...........  57

                                           
                                      S  S 
                    Query_8360   365  CCTCA  369
J  93.9% (46/49)    IGHJ6*02     58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_311987

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            394     7e-112
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_8361  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.4% (271/290)  IGHV1-8*02  6    ..................G..........................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_8361  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.4% (271/290)  IGHV1-8*02  96   ........A.........................................................C.......................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_8361  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.4% (271/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8361  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.4% (271/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_311986

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           321     7e-90
IGHD3-10*02                                                                                           12.2    32   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGTGAACA	TATTCCGATGTT	TGTGGGCCGACGGGGGCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGTGAACATATTCCGATGTTTGTGGGCCGACGGGGGCGTTTTGACTAC	AGEHIPMFVGRRGRFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  C  A  M  H  W  V  R  Q  A  T  G  K  G  L  
                    Query_8362   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTGTGCCATGCACTGGGTCCGCCAGGCTACAGGGAAGGGGCTGG  90
V  91.8% (225/245)  IGHV3-23*01  47   ................................................A.......AG................C...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  S  T  G  G  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8362   91   AGTGGGTCTCATCTGTTAGTTCCACTGGTGGTAACACATACTACGCAGACTCCGTGAAGGGCCGTTTCACCATATCCAGAGACAATTCCA  180
V  91.8% (225/245)  IGHV3-23*01  137  ...........G..A.....GGT.G........G..............................G........C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  S  L  H  I  S  S  L  R  V  E  D  T  A  L  Y  Y  C  A  G  E  H  I  P  M  F  V  
                    Query_8362   181  AGAACACGCTGTCTCTGCATATAAGCAGCCTGAGAGTCGAAGACACGGCCCTATATTACTGTGCGGGTGAACATATTCCGATGTTTGTGG  270
V  91.8% (225/245)  IGHV3-23*01  227  ............A......A..G.A...........C...G.........G..............-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  83.3% (10/12)    IGHD3-10*02  2    -------------------------------------------------------------------------....A.T.....-----  13

                                      GT-------------------->                                  
                                      G  R  R  G  R  F  D  Y  W  G  Q  G  A  L  V  I  V  S  S  
                    Query_8362   271  GCCGACGGGGGCGTTTTGACTACTGGGGCCAGGGAGCCCTGGTCATCGTCTCCTCAG  327
J  95.3% (41/43)    IGHJ4*02     6    --------------.....................A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_337488

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           283     1e-78
IGHD5-18*01                                                                                           14.1    8.8  
IGHJ3*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GAATTTGGCGGG	ACAGCTTTGG	CCAGGC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGAATTTGGCGGGACAGCTTTGGCCAGGCTGATGCTTTTGATGTC	AKGIWRDSFGQADAFDV	251	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	28	28	0	0	100
CDR1-IMGT	29	52	24	21	3	0	87.5
FR2-IMGT	53	103	51	48	3	0	94.1
CDR2-IMGT	104	136	33	21	3	9	63.6
FR3-IMGT	137	250	114	96	18	0	84.2
CDR3-IMGT (germline)	251	257	7	7	0	0	100
Total	N/A	N/A	257	221	27	9	86


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  E
                    Query_8363   1    GTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAGTAACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGA  90
V  86.0% (221/257)  IGHV3-23*01  48   ...................................C......C.G...........G.................................  137
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E

                                      ------------><-----------CDR2-IMGT-----------><-------------------------------------------
                                        W  V  S  L  I  S  G  S  G  A  R  G  R  S  T  Y  Y  A  S  S  V  K  G  R  F  T  I  S  R  D
                    Query_8363   91   GTGGGTCTCACTTATTAGCGGAAGTGGTGCTAGAGGTCGTAGTACATATTATGCAAGCTCCGTGAAGGGCCGGTTCACCATCTCCAGAGA  180
V  86.0% (221/257)  IGHV3-23*01  138  ..........GC......T..T.......---------....C.....C..C...GA.................................  218
                                        W  V  S  A  I  S  G  S  G           G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D

                                      ---------FR3-IMGT----------------------------------------------------><-------------------
                                        N  S  K  K  M  M  F  L  D  M  G  S  L  R  V  E  D  T  A  I  Y  Y  C  A  K  G  I  W  R  D
                    Query_8363   181  CAACTCCAAGAAAATGATGTTTTTGGATATGGGGAGCCTGAGAGTCGAGGACACGGCCATATATTATTGTGCGAAAGGAATTTGGCGGGA  270
V  86.0% (221/257)  IGHV3-23*01  219  ...T........C.C.C...A.C..C.A...AAC..........C.............G.......C..........-------------  295
                                        N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K               
D  90.0% (9/10)     IGHD5-18*01  7    -----------------------------------------------------------------------------------------.  7

                                      -CDR3-IMGT-------------------->                                  
                                        S  F  G  Q  A  D  A  F  D  V  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_8363   271  CAGCTTTGGCCAGGCTGATGCTTTTGATGTCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  335
D  90.0% (9/10)     IGHD5-18*01  8    .....A...--------------------------------------------------------  16
J  98.0% (49/50)    IGHJ3*01     1    ---------------...............................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_337489

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         353     1e-99
IGHD3-16*01                                                                                           14.1    9.0  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGAGGGCTCGCGGCGTCACTTTTTATTTTAA	TTTGGGG	ACTTCTGGAGGA	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAGGGCTCGCGGCGTCACTTTTTATTTTAATTTGGGGACTTCTGGAGGATGGTTCGACCCC	ARGRARGVTFYFNLGTSGGWFDP	241	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	236	10	0	95.9


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  L 
                    Query_8364     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCATCAGCAGTGGTTACTACTGGGGCTGGCTCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  95.9% (236/246)  IGHV4-38-2*01  49   ...............................................................A..........................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  T  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 
                    Query_8364     91   GAGTGGATTGGGACTATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACTATGTCAGTAGACACGTCCAAG  180
V  95.9% (236/246)  IGHV4-38-2*01  139  .............G.................G....................................C..A..................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------------------
                                         N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  G  R  A  R  G  V  T  F 
                    Query_8364     181  AACCACTTCTCCCTAAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTATGTATTACTGTGCGAGAGGGAGGGCTCGCGGCGTCACTTTT  270
V  95.9% (236/246)  IGHV4-38-2*01  229  .....G........G.......................A........CG.................------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         

                                        CDR3-IMGT----------------------------->                                  
                                         Y  F  N  L  G  T  S  G  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8364     271  TATTTTAATTTGGGGACTTCTGGAGGATGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  343
D  100.0% (7/7)     IGHD3-16*01    15   --------.......----------------------------------------------------------  21
J  100.0% (46/46)   IGHJ5*02       6    ---------------------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_337480

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           383     1e-108
IGHD2-2*01                                                                                            19.9    0.18  
IGHJ6*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGGGCTGCATCTTGCAGCG	GTACTAGCTGCTA	CGATTTAGG	CGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGGGCTGCATCTTGCAGCGGTACTAGCTGCTACGATTTAGGCGGAATGGACGTC	ARRAASCSGTSCYDLGGMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  L  G  S  G  Y  N  F  A  K  Y
                    Query_8365   1    GCAGCTGGTGCAGTCTGGAGCAGAGCTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCTGGGTTCTGGATACAACTTTGCCAAATA  90
V  92.4% (267/289)  IGHV5-51*03  6    .........................G...................................AA..............G....A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  T  I  Y  P  S  D  S  D  T  R  Y  S  P
                    Query_8365   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGACCATCTATCCTTCTGACTCTGATACCCGATACAGCCC  180
V  92.4% (267/289)  IGHV5-51*03  96   ........G............................................T..........GG.............A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  L  S  I  A  Y  L  Q  W  S  S  L  R  G  S  D  T  A
                    Query_8365   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCCTCTCCATCGCCTATCTGCAGTGGAGCAGCCTGAGGGGCTCGGACACCGC  270
V  92.4% (267/289)  IGHV5-51*03  186  .............................C..........A..AG..C......C...................A..C............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        T  Y  Y  C  A  R  R  A  A  S  C  S  G  T  S  C  Y  D  L  G  G  M  D  V  W  G  H  G  T  T
                    Query_8365   271  CACTTATTACTGTGCGAGAAGGGCTGCATCTTGCAGCGGTACTAGCTGCTACGATTTAGGCGGAATGGACGTCTGGGGCCACGGGACCAC  360
V  92.4% (267/289)  IGHV5-51*03  276  ..TG...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  92.3% (12/13)    IGHD2-2*01   15   --------------------------------------....C........---------------------------------------  27
J  93.5% (43/46)    IGHJ6*02     17   ------------------------------------------------------------...T.................A........  46

                                                      
                                        V  I  V  S  S 
                    Query_8365   361  GGTCATCGTCTCCTCA  376
J  93.5% (43/46)    IGHJ6*02     47   .....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_337481

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           304     9e-85
IGHD3-16*01                                                                                           12.2    32   
IGHJ2*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGGCG	TGGGGG	GATCAAGGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGGCGTGGGGGGATCAAGGGATCCTGGTACTCCGATCTC	ARVRRGGIKGSWYSDL	239	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	11	1	0	91.7
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	49	2	0	96.1
CDR2-IMGT	101	124	24	16	8	0	66.7
FR3-IMGT	125	238	114	108	6	0	94.7
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	232	213	19	0	91.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  V  S  G  F  T  F  S  R  H  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  H  I 
                    Query_8366   14   TGTGCAGTCTCTGGATTCACCTTCAGTAGACATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCACACATC  103
V  91.8% (213/232)  IGHV3-48*03  64   .......C.....................TT..........C..........................................T....T  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  T  G  S  T  L  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  E  N  S  L  Y  L 
                    Query_8366   104  AGTACTGGTAGTACTCTAATAAACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCGAGAATTCACTGTATCTG  193
V  91.8% (213/232)  IGHV3-48*03  154  ....G.A..G...G.ACC...T..................................................A....C............  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  V  R  R  G  G  I  K  G  S  W  Y  S  D 
                    Query_8366   194  CAAATGAACAGTCTGAGAGCCGAGGACACGGCTATCTATTACTGTGCGAGAGTCCGGCGTGGGGGGATCAAGGGATCCTGGTACTCCGAT  283
V  91.8% (213/232)  IGHV3-48*03  244  ...........C.....................G.T................--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (6/6)     IGHD3-16*01  17   -----------------------------------------------------------......-------------------------  22
J  96.0% (48/50)    IGHJ2*01     4    -----------------------------------------------------------------------------........T....  16

                                      -->                                  
                                       L  W  G  R  G  T  L  V  I  V  S  S  
                    Query_8366   284  CTCTGGGGCCGTGGCACCCTGGTCATTGTCTCCTCAG  320
J  96.0% (48/50)    IGHJ2*01     17   .........................C...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_337482

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           377     9e-107
IGHD5-18*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	GGATACACCTATGGT	CA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGATACACCTATGGTCATGACTAC	AREGYTYGHDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	266	25	0	91.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  F  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  G  P  F  S  S  Y
                    Query_8367   1    GCAGCTGGTGCAGTCTGGAGCCGAGTTTAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGCAAGGCCTCTGGCGGCCCCTTCAGCAGTTA  90
V  91.4% (266/291)  IGHV1-69*01  6    ..................G..T...G.G......................A...............T.....A...A..........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  I  R  Q  A  P  G  L  G  L  E  W  M  G  G  I  I  P  I  L  G  P  A  N  Y  A  V
                    Query_8367   91   CGCTATTAGCTGGATTCGACAGGCCCCTGGACTAGGGCTTGAGTGGATGGGGGGGATCATCCCTATCCTTGGTCCAGCAAACTACGCAGT  180
V  91.4% (266/291)  IGHV1-69*01  96   T.....C......G.G................A..................A...............T.....A..............CA  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  L  E  V  K  S  L  R  S  E  D  T  A
                    Query_8367   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACTTGGAGGTGAAAAGCCTGCGATCTGAGGACACGGC  270
V  91.4% (266/291)  IGHV1-69*01  186  .......................................................A.....C...GC......A................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                
                                        V  Y  Y  C  A  R  E  G  Y  T  Y  G  H  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8367   271  CGTGTATTATTGTGCGAGAGAAGGATACACCTATGGTCATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  348
V  91.4% (266/291)  IGHV1-69*01  276  .........C...........---------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                            
D  93.3% (14/15)    IGHD5-18*01  3    ----------------------.......G.......-----------------------------------------  17
J  100.0% (39/39)   IGHJ4*02     8    ---------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_337483

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           344     6e-97
IGHD6-13*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGTGGTGT	CAGCAGCTGGT	GCGGGCCGGCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTGGTGTCAGCAGCTGGTGCGGGCCGGCCGACTAC	ARGGGVSSWCGPADY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  V  T  R  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8368   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGCTCACCGTCACTAGGAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.7% (233/246)  IGHV3-53*01  47   ................................T.........G...C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  T  G  G  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  S  S  K  
                    Query_8368   91   AGTGGGTCTCAGTTATTTATACCGGTGGAAGCACATACTATTCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  94.7% (233/246)  IGHV3-53*01  137  .....................G......T...........CG.......................................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------CDR3-IMGT----
                                      N  T  L  L  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  G  V  S  S  W  C  
                    Query_8368   181  ACACACTACTTCTTCAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGGGGGTGGTGTCAGCAGCTGGTGCG  270
V  94.7% (233/246)  IGHV3-53*01  227  ....G..GTA......A.................................................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD6-13*01  9    ----------------------------------------------------------------------------...........---  19

                                      ------------->                                  
                                      G  P  A  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8368   271  GGCCGGCCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (40/40)   IGHJ4*02     9    --------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_337484

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           300     9e-84
IGHD2-2*01                                                                                            12.2    34   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	GGACGAGG	GGACATTGCGGTAGT	GTTACCTGTTTTAATGGGAAATATGACA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGACGAGGGGACATTGCGGTAGTGTTACCTGTTTTAATGGGAAATATGACATTGACTAC	VRTRGHCGSVTCFNGKYDIDY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	219	27	0	89


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8369   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAATTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  89.0% (219/246)  IGHV3-64*05  47   ....................T...................C..T.GC.....T...CA................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  A  I  S  S  D  G  G  A  T  T  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8369   91   AATTTGTTTCAGCTATCAGTAGTGATGGGGGTGCCACAACCTACGGAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  89.0% (219/246)  IGHV3-64*05  137  ...A............T......A........AG....TA.....C............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  F  L  H  L  S  S  L  R  P  E  D  T  S  I  Y  F  C  V  R  T  R  G  H  C  G  S  
                    Query_8369   181  AGAACACACTGTTTCTTCATTTGAGCAGTCTGAGACCTGAGGACACATCTATTTATTTCTGTGTGAGGACGAGGGGACATTGCGGTAGTG  270
V  89.0% (219/246)  IGHV3-64*05  227  .......G....A.G....AA..............G..........GG..G.G....A........------------------------  292
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V                          
D  80.0% (12/15)    IGHD2-2*01   2    --------------------------------------------------------------------------...T....TA.....-  16

                                      DR3-IMGT-------------------------->                                  
                                      V  T  C  F  N  G  K  Y  D  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8369   271  TTACCTGTTTTAATGGGAAATATGACATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_337486

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTTTATTACCT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTATTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_8370   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTTCCACTTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ..............................................................................C...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  P
                    Query_8370   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAGTCC  180
V  95.2% (277/291)  IGHV5-51*01  96   C.......G.................................................T.................A..........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_8370   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .......C.....................C...............C...........................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_8370   271  CATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTATTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD1-26*01  4    -----------------------------...G....A.....-----------------------------------------------  17
J  98.0% (48/49)    IGHJ6*02     14   ------------------------------------------------------....................................  49

                                                   
                                        T  V  S  S 
                    Query_8370   361  CACCGTCTCGTCA  373
J  98.0% (48/49)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_337487

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           371     7e-105
IGHD2-2*01                                                                                            14.1    8.8   
IGHJ6*02                                                                                              106     3e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCGACGCCATC	CTATGCC	GAACTTGCGCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCGACGCCATCCTATGCCGAACTTGCGCCCTACTACTACTACGGTATGGACGTC	AKATPSYAELAPYYYYGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	242	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  I  S  C  A  A  S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8371   1    GGTCCCTGAGAATCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.0% (242/247)  IGHV3-30*18  47   ...........C...............................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  M  S  Y  D  G  S  D  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8371   91   AGTGGGTGTCAGTTATGTCATATGATGGAAGTGATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  98.0% (242/247)  IGHV3-30*18  137  ........G.......A...............A.........................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  T  P  S  Y  A  E  
                    Query_8371   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAGGCGACGCCATCCTATGCCGAAC  270
V  98.0% (242/247)  IGHV3-30*18  227  ...................................................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-2*01   25   -------------------------------------------------------------------------------.......----  31

                                      R3-IMGT------------------------>                              
                                      L  A  P  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_8371   271  TTGCGCCCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  332
J  100.0% (55/55)   IGHJ6*02     5    -------.......................................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_260740

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           327     8e-92
IGHD3-9*01                                                                                            14.1    8.0  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TTTGACT	TGAAACC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTGACTTGAAACCCTACTTTGACTAC	ARFDLKPYFDY	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	20	6	0	76.9
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	126	24	19	5	0	79.2
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  I  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_8372   2    CCCTGTCCCTCACCTGCGCAGCCTCCGGATTCACGTTCATTAATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  92.7% (227/245)  IGHV3-48*03  50   .....AGA...T....T........T........C....G..G...............................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  Y  I  S  G  S  G  S  L  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  
                    Query_8372   92   GGGTTTCATACATTAGTGGAAGTGGTAGTCTCACATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGA  181
V  92.7% (227/245)  IGHV3-48*03  140  .................A.T.........AC..T........................................................  229
                                      W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      S  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  F  D  L  K  P  Y  F  D  
                    Query_8372   182  GCTCTCTCTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTTCTGTGCGAGATTTGACTTGAAACCCTACTTTGACT  271
V  92.7% (227/245)  IGHV3-48*03  230  A...A..G..............................................A..........-------------------------  294
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD3-9*01   13   -----------------------------------------------------------------.......------------------  19
J  95.7% (45/47)    IGHJ4*02     2    -------------------------------------------------------------------------------...........  12

                                      ->                                  
                                      Y  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_8372   272  ACTGGGGCCAGGGAACCCCAGTCACCGTCTCCTCAG  307
J  95.7% (45/47)    IGHJ4*02     13   ..................TG................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_260741

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            321     7e-90
IGHD1-26*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	GCTGGGC	GGGAGCT	GGGCCCCAGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAAAGATGCTGGGCGGGAGCTGGGCCCCAGTTACTTAAACTAC	AKDAGRELGPSYLNY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	251	9	8	1	0	88.9
Total	N/A	N/A	251	228	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  D  N  Y  A  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_8373   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTTGATAATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAGGGGCCTGG  90
V  90.8% (228/251)  IGHV3-9*01   47   ....................................CC......G....................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  G  W  N  G  D  S  I  G  Y  A  G  A  V  Y  G  R  F  T  I  S  R  D  N  A  
                    Query_8373   91   AGTGGGTCTCAGGTATTGGTTGGAATGGGGATAGCATCGGCTACGCGGGCGCTGTGTATGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.8% (228/251)  IGHV3-9*01   137  .................A........A.T.G......A.....T....A.T.....A.G...............................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  K  S  V  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  A  G  R  E  L  G  
                    Query_8373   181  AGAAGTCCGTCTACCTGCAAATGAACAGTCTGAGACCTGAGGACACGGCCGTTTATTATTGTGCTAAAGATGCTGGGCGGGAGCTGGGCC  270
V  90.8% (228/251)  IGHV3-9*01   227  ....C...C.G..T.....................G..............T.G.....C.....A......-------------------  297
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (7/7)     IGHD1-26*01  9    ------------------------------------------------------------------------------.......-----  15

                                      ---------------->                                 
                                      P  S  Y  L  N  Y  W  G  Q  G  T  V  V  F  V  S  S 
                    Query_8373   271  CCAGTTACTTAAACTACTGGGGCCAGGGAACCGTGGTCTTCGTCTCCTCA  320
J  88.9% (40/45)    IGHJ4*02     3    -----.....TG....................C.....AC..........  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_260743

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD2-15*01                                                                                           12.2    31   
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGC	CTACTC	TTG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTGCTACGGTATGGACGTC	AREAYSCYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8374   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_8374   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  C  Y  G  M  D 
                    Query_8374   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTGCTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-15*01  25   --------------------------------------------------------------------......----------------  30
J  95.9% (47/49)    IGHJ6*02     14   -----------------------------------------------------------------------------.............  26

                                      -->                                 
                                       V  W  G  Q  G  A  T  V  I  V  S  S 
                    Query_8374   271  GTCTGGGGCCAAGGGGCCACGGTCATCGTCTCCTCA  306
J  95.9% (47/49)    IGHJ6*02     27   ...............A.........C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_260746

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           318     6e-89
IGHD2-15*01                                                                                           23.8    0.012
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGTCA	ACACTTATCTCCC	TATTGCAGTGGTGGT	TCCTGCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGTCAACACTTATCTCCCTATTGCAGTGGTGGTTCCTGCCCCTACTTCTATTACTTTATGGACGTC	ARQHLSPYCSGGSCPYFYYFMDV	244	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	227	24	0	90.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  Y  G  S  I  S  S  S  D  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_8375   1    ACCCTGTCCCTCACCTGCACTGTCTCTTATGGCTCCATCAGCAGTAGCGACTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  90.4% (227/251)  IGHV4-39*01  49   ...........................GG..................TAGT.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  F  Y  T  G  S  A  Y  H  T  P  P  L  K  S  R  L  T  I  S  I  D  T  P 
                    Query_8375   91   CTGGAGTGGCTTGGGAGTATCTTTTATACTGGGAGCGCCTACCACACCCCGCCCCTCAAGAGTCGACTCACCATATCCATAGACACGCCC  180
V  90.4% (227/251)  IGHV4-39*01  139  .........A............A.....G.......A.....T...A....T..............G...........G........T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  H  L  R  A  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  H  L  S  P  Y  C 
                    Query_8375   181  AAGAATCAGTTCTCCCTGCACCTGAGGGCTGTGACCGCCGCAGACACGGCTGTGTACTACTGTGCGCGTCAACACTTATCTCCCTATTGC  270
V  90.4% (227/251)  IGHV4-39*01  229  .....C............A.G.....CT............................T.........A.A..-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  93.3% (14/15)    IGHD2-15*01  5    ------------------------------------------------------------------------------------.....T  10

                                      ---CDR3-IMGT----------------------------->                                 
                                       S  G  G  S  C  P  Y  F  Y  Y  F  M  D  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_8375   271  AGTGGTGGTTCCTGCCCCTACTTCTATTACTTTATGGACGTCTGGGGCCAAGGGACGCCGGTCACCGTCTCCTCA  345
D  93.3% (14/15)    IGHD2-15*01  11   .........------------------------------------------------------------------  19
J  89.7% (52/58)    IGHJ6*02     5    -----------------.....A...C...GG........................CA.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_260747

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           14.1    9.8   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGACA	TGGCGATGGTAC	TGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATGGCGATGGTACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	AGHGDGTGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_8376   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCCACTTA  90
V  95.5% (278/291)  IGHV5-51*01  6    ..................................................A...............................A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  P
                    Query_8376   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   C.......G.................................................T.................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_8376   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  .......C.....................C...........................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  G  H  G  D  G  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_8376   271  CATCTATTACTGTGCGGGACATGGCGATGGTACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  ...G............A....---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  90.0% (9/10)     IGHD1-26*01  8    ---------------------------------....A.....-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------......TA....................................  49

                                                   
                                        T  V  S  S 
                    Query_8376   361  CACCGTCTCGTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_196708

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         389     2e-110
IGHD6-25*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CACGACCAAGACGATGCAA	CAGCGG	G	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACGACCAAGACGATGCAACAGCGGGTGACTAC	ARHDQDDATAGDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  R  I  S  C  Q  G  S  G  Y  S  F  A  M  H
                    Query_8377     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTCAGGGTTCTGGATACAGCTTTGCCATGCA  90
V  93.1% (269/289)  IGHV5-10-1*01  6    .............................A...............................A....................A...GCT.  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  R  D  S  Y  T  T  Y  S  P
                    Query_8377     91   CTGGATCACCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGCGGATTGATCCTCGTGACTCTTATACGACCTACAGCCC  180
V  93.1% (269/289)  IGHV5-10-1*01  96   ........G.............A.............................A...........A.............C.A.........  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  R  V  T  I  S  V  D  K  S  I  T  T  A  H  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8377     181  GTCCTTCCAAGGCCGCGTCACCATCTCAGTTGACAAGTCCATCACCACTGCCCATCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  93.1% (269/289)  IGHV5-10-1*01  186  ..............A..............C..............G.......T.C...........C.......................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          V  Y  Y  C  A  R  H  D  Q  D  D  A  T  A  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8377     271  CGTGTACTACTGTGCGAGACACGACCAAGACGATGCAACAGCGGGTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  93.1% (269/289)  IGHV5-10-1*01  276  .A....T............-------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD6-25*01    9    --------------------------------------......------------------------------------------  14
J  100.0% (41/41)   IGHJ4*02       8    ---------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_310148

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     1e-87
IGHD2-15*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TT	GGATATTGTTTTGGTGG	GAGTTGTTCTGAGGG	CTTAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTGGATATTGTTTTGGTGGGAGTTGTTCTGAGGGCTTAGACTAC	ESWILFWWELF*GLRL	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	243	115	105	9	1	91.3
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	227	22	1	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  N  F  I  T  Y  G  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_8378   1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCAATTTTATCACTTATGGCATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-23*01  47   .......................G............CC....G..GC....C.....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  D  S  A  S  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  S  
                    Query_8378   91   AGTGGGTCTCAGCTATAAGTGGCAGTGGTGATAGCGCATCCTACGCGGACTCCGTGACGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  90.8% (227/250)  IGHV3-23*01  137  ................T.....T.......G....A...A......A..........A...........................T...-  225
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT-----------------------------------------------------><--------------------CDR3-I
                                      K  K  H  A  V  S  A  H  E  Q  P  E  T  R  R  H  G  R  I  L  L  C  E  S  W  I  L  F  W  W  
                    Query_8378   181  AAAAACACGCTGTATCTGCACATGAACAGCCTGAGACCCGAAGACACGGCCGTATATTATTGTGCGAAAGTTGGATATTGTTTTGGTGGG  270
V  90.8% (227/250)  IGHV3-23*01  226  ..G.................A...............G....G.................C..........--------------------  295
                                       K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                      
D  88.2% (15/17)    IGHD2-15*01  2    ------------------------------------------------------------------------.........AG......-  18

                                      MGT-------------------->                                  
                                      E  L  F  *  G  L  R  L  L  G  P  G  N  P  G  H  R  V  L   
                    Query_8378   271  AGTTGTTCTGAGGGCTTAGACTACTGGGGCCTGGGAACCCTGGTCACCGTGTCCTCAG  328
J  93.2% (41/44)    IGHJ4*02     5    --------------...T.............A..................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_146081

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_8379   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T..........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  R  S  E 
                    Query_8379   91   GAGTGGATTGGGGAGATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCAAGTCTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ..............A....A..A..............A...................AG............A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  M  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_8379   181  AACCAGTTCTCCCTGATGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................A.....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8379   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_196705

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            329     3e-92
IGHD3-3*01                                                                                            37.2    1e-06
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGCGACGTCCGGGTCC	TACGATTTTTGGAGTGGTT	CTGGTACTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGCGACGTCCGGGTCCTACGATTTTTGGAGTGGTTCTGGTACTCTTGACTAC	AREATSGSYDFWSGSGTLDY	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  T  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_8380  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTAGTGGTACCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  90
V  92.3% (229/248)  IGHV4-4*02  49   ..................G...................C..C...A...A..............................G.........  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  S  H  S  G  S  T  K  Y  N  T  S  L  R  S  R  V  T  I  S  V  D  R  S  N 
                    Query_8380  91   GAGTGGATTGGAGAAATCTCTCATAGTGGGAGCACCAAGTACAACACGTCCCTCAGGAGTCGAGTCACCATATCAGTAGACAGGTCGAAC  180
V  92.3% (229/248)  IGHV4-4*02  139  ...........G.......A..................C......C.........A..........................A...C..G  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><-------------------------CDR3
                                      K  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  T  S  G  S  Y  D 
                    Query_8380  181  AAGCAGTTCTCCCTGAGATTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGAGGCGACGTCCGGGTCCTACGAT  270
V  92.3% (229/248)  IGHV4-4*02  229  ..C.............AGC...G.............................................----------------------  296
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (19/19)   IGHD3-3*01  5    ------------------------------------------------------------------------------------......  10

                                     -IMGT------------------------>                                  
                                      F  W  S  G  S  G  T  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_8380  271  TTTTGGAGTGGTTCTGGTACTCTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  334
D  100.0% (19/19)   IGHD3-3*01  11   .............---------------------------------------------------  23
J  97.6% (41/42)    IGHJ4*02    7    ----------------------.....................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_196706

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           380     1e-107
IGHD5-18*01                                                                                           18.0    0.64  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	GGATCCACCTATGGT	CA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGATCCACCTATGGTCATGACTAC	AREGSTYGHDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  F  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  G  P  F  S  S  Y
                    Query_8381   1    GCAGCTGGTGCAGTCTGGAGCCGAGTTTAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGCAAGGCCTCTGGCGGCCCCTTCAGCAGTTA  90
V  91.8% (267/291)  IGHV1-69*01  6    ..................G..T...G.G......................A...............T.....A...A..........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  I  R  Q  A  P  G  L  G  L  E  W  M  G  G  I  I  P  I  L  G  P  A  N  Y  A  V
                    Query_8381   91   CGCTATTAGCTGGATTCGACAGGCCCCTGGACTAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCCTTGGTCCAGCAAACTACGCAGT  180
V  91.8% (267/291)  IGHV1-69*01  96   T.....C......G.G................A..................................T.....A..............CA  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  L  E  V  K  S  L  R  S  E  D  T  A
                    Query_8381   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACGGCCTACTTGGAGGTGAAAAGCCTGCGATCTGAGGACACGGC  270
V  91.8% (267/291)  IGHV1-69*01  186  ................................................A......A.....C...GC......A................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                
                                        V  Y  Y  C  A  R  E  G  S  T  Y  G  H  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8381   271  CGTGTATTACTGTGCGAGAGAAGGATCCACCTATGGTCATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  348
V  91.8% (267/291)  IGHV1-69*01  276  .....................---------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                            
D  86.7% (13/15)    IGHD5-18*01  3    ----------------------....A..G.......-----------------------------------------  17
J  100.0% (39/39)   IGHJ4*02     8    ---------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_196707

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           310     1e-86
IGHD3-10*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGCGC	ACTATGG	GTCCAG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGCGCACTATGGGTCCAGCTTTGACACC	AKDAHYGSSFDT	232	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	11	0	0	100
CDR1-IMGT	19	42	24	22	2	0	91.7
FR2-IMGT	43	93	51	46	5	0	90.2
CDR2-IMGT	94	117	24	21	3	0	87.5
FR3-IMGT	118	231	114	107	7	0	93.9
CDR3-IMGT (germline)	232	239	8	8	0	0	100
Total	N/A	N/A	232	215	17	0	92.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  F  S  M  N  W  V  R  Q  G  P  G  K  G  L  E  W  V  S  F  I  
                    Query_8382   8    GTGCAGCCTCTGGATTCACCTTTAGCAGCTTTTCCATGAACTGGGTCCGCCAGGGTCCAGGGAAGGGGCTGGAGTGGGTCTCGTTTATTA  97
V  92.7% (215/232)  IGHV3-23*01  65   ..............................A.G......G..............C...........................AGC.....  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  S  S  T  Y  N  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  N  T  L  Y  L  
                    Query_8382   98   GTGGTAGTGGTAGCAGTACATATAACGCAGACTCCGTAAAGGGCCGCTTCACCATCTCCAGAGACAATTCCAGGAACACGCTGTATCTGC  187
V  92.7% (215/232)  IGHV3-23*01  155  ...........G.T..C.....CT.............G........G.........................A.................  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------CDR3-IMGT------------>          
                                      Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  A  H  Y  G  S  S  F  D  T  W  G  Q  
                    Query_8382   188  AAATGAACAGCCTGAGAGCCGACGACACGGCCGTATACTACTGTGCGAAAGATGCGCACTATGGGTCCAGCTTTGACACCTGGGGCCAGG  277
V  92.7% (215/232)  IGHV3-23*01  245  ......................G..............T..............--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (7/7)     IGHD3-10*01  6    ---------------------------------------------------------.......--------------------------  12
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------.......TA...........  24

                                                              
                                      G  T  L  V  T  V  S  S  
                    Query_8382   278  GAACCCTGGTCACCGTCTCCTCAG  301
J  95.5% (42/44)    IGHJ4*02     25   ........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_196700

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_8383   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.0% (222/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  P  K  N 
                    Query_8383   91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGCCCAAGAAC  180
V  91.0% (222/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T.......T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_8383   181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.0% (222/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_8383   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_196701

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_8384   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_8384   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_8384   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_8384   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_196702

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD6-19*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TTCCTCT	TGGCTGG	GACC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATTCCTCTTGGCTGGGACCTGATGCTTTTCAAATC	ARDSSWLGPDAFQI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8385   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGAAGTTACTACTGGAATTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ...............................G.........T.............GC.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  S  G  T  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  G  D  T  S  K  N 
                    Query_8385   91   TGGATTGGGTATATGTATTACAGTGGGACTACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGGAGACACGTCTAAGAAC  180
V  93.1% (228/245)  IGHV4-59*01  139  ..............C.............GC.....................A.....................T.........C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  F  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  L  G  P  D  A 
                    Query_8385   181  CAATTTTTCCTGACGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGGGATTCCTCTTGGCTGGGACCTGATGCT  270
V  93.1% (228/245)  IGHV4-59*01  229  ..G..C.C.....A.C.....................................C........A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD6-19*01  12   ------------------------------------------------------------------------.......-----------  18
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------------------.......  7

                                      -------->                                  
                                       F  Q  I  W  G  Q  G  T  I  V  T  V  S  S  
                    Query_8385   271  TTTCAAATCTGGGGCCAGGGGACAATTGTCACCGTGTCTTCAG  313
J  90.0% (45/50)    IGHJ3*02     8    ...G.T...........A........G........C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_196703

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           405     3e-115
IGHD3-10*01                                                                                           12.2    35    
IGHJ5*02                                                                                              56.4    4e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CA	CGGGGA	TTCCCATCCGC	CCCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACGGGGATTCCCATCCGCCCCC	ATRGFPSAP	290	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	69	5	0	93.2
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	293	4	4	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  V  A  S  G  F  S  F  S  
                    Query_8386   3    AGGTCCAGCTTGTGCAGTCTGGAGGAGGCTTGGTACAGCCTGGAGGGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTTAGCTTCAGTA  92
V  94.5% (275/291)  IGHV3-48*03  2    ....G.....G...G.......G...........................................C............C.C........  91
                                         V  Q  L  V  E  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  E  M  N  W  V  T  Q  A  P  G  K  G  L  E  W  V  S  Y  I  S  S  S  G  R  T  I  Y  Y  
                    Query_8386   93   GTTATGAAATGAACTGGGTCACCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCCTACATTAGTAGTAGTGGTAGAACCATATACTACG  182
V  94.5% (275/291)  IGHV3-48*03  92   ....................CG.................................A....................T.............  181
                                      S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  D  S  V  T  G  R  F  T  I  S  R  D  N  D  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  
                    Query_8386   183  CAGACTCTGTGACGGGCCGATTCACCATCTCCAGAGACAACGACAAGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACA  272
V  94.5% (275/291)  IGHV3-48*03  182  ............A.............................C......C........................................  271
                                      A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  

                                      ----------------><--------CDR3-IMGT-------->                                  
                                      T  A  V  Y  Y  S  A  T  R  G  F  P  S  A  P  W  G  Q  G  A  L  V  T  L  S  S  
                    Query_8386   273  CGGCTGTATATTACTCTGCGACACGGGGATTCCCATCCGCCCCCTGGGGCCAGGGAGCCCTGGTCACCCTCTCATCAG  350
V  94.5% (275/291)  IGHV3-48*03  272  .......T.......G.....---------------------------------------------------------  292
                                      T  A  V  Y  Y  C  A                                                           
D  100.0% (6/6)     IGHD3-10*01  15   -----------------------......-------------------------------------------------  20
J  92.1% (35/38)    IGHJ5*02     14   ----------------------------------------................A...........G....C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_119831

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           355     3e-100
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCT	TTACTATGATAGTAGTGCTTA	CTATGCCTCTTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCTTTACTATGATAGTAGTGCTTACTATGCCTCTTTCTACGTTCTGGACGTC	ARELYYDSSAYYASFYVLDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	239	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  T  V  S  L  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_8387   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCACCGTCAGTCTTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  95.2% (239/251)  IGHV4-61*01  49   .................................T.......CAG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  V  Y  F  N  G  N  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_8387   91   CTGGAGTGGATTGGGTATGTCTATTTCAATGGGAACACCAATTACAACCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCC  180
V  95.2% (239/251)  IGHV4-61*01  139  ..................A......A..G.....G......C........................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  L  Y  Y  D  S  S 
                    Query_8387   181  AAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGAGCTTTACTATGATAGTAGT  270
V  95.2% (239/251)  IGHV4-61*01  229  .....................C...............................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.2% (20/21)    IGHD3-22*01  4    --------------------------------------------------------------------------................  19

                                      DR3-IMGT------------------------>                                 
                                       A  Y  Y  A  S  F  Y  V  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8387   271  GCTTACTATGCCTCTTTCTACGTTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  336
D  95.2% (20/21)    IGHD3-22*01  20   .G...-------------------------------------------------------------  24
J  95.9% (47/49)    IGHJ6*02     14   -----------------.....G.A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_124279

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD3-22*01                                                                                           41.1    8e-08 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	TCGGCGCCG	ATTACTATGATAGTAGTGGTT	TTCCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATCGGCGCCGATTACTATGATAGTAGTGGTTTTCCTTACTACGGAATGGACGTC	AIGADYYDSSGFPYYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	286	274	12	0	95.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  L  K  V  S  C  K  A  F  G  Y  T  I  T  G  Y 
                    Query_8388   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCACTGAAGGTCTCCTGCAAGGCTTTTGGTTACACCATTACCGGCTAT  91
V  95.8% (274/286)  IGHV1-18*01  7    .............................................G.....................C..........T.....A.....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  D  W  M  G  W  V  S  G  Y  N  G  N  T  K  Y  A  Q 
                    Query_8388   92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGATTGGATGGGATGGGTCAGCGGTTACAATGGTAACACAAAGTATGCACAG  181
V  95.8% (274/286)  IGHV1-18*01  97   ........C................................G............A......C..................C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  V  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  G  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_8388   182  AAGGTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGGCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.8% (274/286)  IGHV1-18*01  187  ...C.............................................C........................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  A  I  G  A  D  Y  Y  D  S  S  G  F  P  Y  Y  G  M  D  V  W  G  Q  G  T  T  V 
                    Query_8388   272  GTCTATTACTGTGCGATCGGCGCCGATTACTATGATAGTAGTGGTTTTCCTTACTACGGAATGGACGTCTGGGGCCAAGGGACCACGGTC  361
V  95.8% (274/286)  IGHV1-18*01  277  ..G.............--------------------------------------------------------------------------  292
                                       V  Y  Y  C  A                                                                            
D  100.0% (21/21)   IGHD3-22*01  3    -------------------------.....................--------------------------------------------  23
J  97.9% (47/48)    IGHJ6*02     12   ---------------------------------------------------........T..............................  50

                                               
                                       T  V  S 
                    Query_8388   362  ACCGTCTCC  370
J  97.9% (47/48)    IGHJ6*02     51   .........  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_124278

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           369     2e-104
IGHD2-21*02                                                                                           16.1    2.5   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TGATCTGTTTGA	TGGTGACT	CCCCCACTGTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGATGATCTGTTTGATGGTGACTCCCCCACTGTTTACTTTGACTAC	ATDDLFDGDSPTVYFDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	263	27	0	90.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  T  F  T  S  F 
                    Query_8389   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAATGAAGGTGTCCTGCAAGGCTTCTGGTTACACTTTTACCAGTTTT  91
V  90.7% (263/290)  IGHV1-18*01  7    .............................................G.......C.......................C........C.A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  L  S  W  L  R  Q  A  P  G  Q  G  L  E  F  M  G  W  I  R  P  H  T  G  D  T  N  Y  V  Q 
                    Query_8389   92   GGTCTCAGCTGGCTGCGACAGGCCCCTGGACAGGGGCTTGAGTTCATGGGATGGATCAGACCACACACTGGTGACACAAACTATGTACAG  181
V  90.7% (263/290)  IGHV1-18*01  97   ...A........G...................A..........GG..............CG.TT...A....A............C....  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  D  R  V  T  M  T  T  D  T  S  T  N  T  V  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_8389   182  AAGTTCCAGGACAGAGTCACCATGACCACAGACACATCCACGAACACAGTCTACATGGAGTTGAGGAGCCTGAGATCAGACGACACGGCC  271
V  90.7% (263/290)  IGHV1-18*01  187  ...C......G................................G.....C..........C................T............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------CDR3-IMGT-------------------->                           
                                       T  Y  Y  C  A  T  D  D  L  F  D  G  D  S  P  T  V  Y  F  D  Y  W  G  Q  G  T  P  V  T  V 
                    Query_8389   272  ACATATTACTGTGCGACAGATGATCTGTTTGATGGTGACTCCCCCACTGTTTACTTTGACTACTGGGGCCAGGGAACCCCGGTCACCGTC  361
V  90.7% (263/290)  IGHV1-18*01  277  GTG.............G...----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (8/8)     IGHD2-21*02  13   --------------------------------........--------------------------------------------------  20
J  97.8% (45/46)    IGHJ4*02     3    ---------------------------------------------------............................T..........  41

                                             
                                       S  S  
                    Query_8389   362  TCCTCAG  368
J  97.8% (45/46)    IGHJ4*02     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_253755

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           375     3e-106
IGHD3-22*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGCCGG	AGTAGTGGTTATTACT	CTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGCCGGAGTAGTGGTTATTACTCTTACTACTTTGACTAC	ARGRRSSGYYSYYFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	242	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8390   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.2% (242/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8390   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  99.2% (242/244)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  N  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  S  S  G  Y  Y  S 
                    Query_8390   181  CAGTTCTCCCTGAAGCTGAACTCTGTGGCCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGTCGCCGGAGTAGTGGTTATTACTCT  270
V  99.2% (242/244)  IGHV4-59*01  229  ...................G.......A....................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (16/16)   IGHD3-22*01  14   ------------------------------------------------------------------------................--  29

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8390   271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_65165

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           37.2    1e-06 
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAG	TTACTTTGATAGTAGTGGTTAT	GCTCAGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTACTTTGATAGTAGTGGTTATGCTCAGGACGGTATGGACGTC	ARESYFDSSGYAQDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8391   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  S  I  S  S  S  S  N  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8391   91   ACTGGGTCTCATCCATTAGTAGTAGTAGTAATTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  .G............................G...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  R  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  S  Y  F  D  S  S  
                    Query_8391   181  AGAACTCACTGTATCTGCAAATGAACAGGCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAAAGTTACTTTGATAGTAGTG  270
V  98.4% (246/250)  IGHV3-21*01  227  ............................C.........................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.5% (21/22)    IGHD3-22*01  4    -------------------------------------------------------------------------.....A...........  20

                                      IMGT--------------------->                                 
                                      G  Y  A  Q  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8391   271  GTTATGCTCAGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  95.5% (21/22)    IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_124274

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD3-16*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	TGGGGGA	TGGCGACAATTCTGACATTTCG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTC	TRVGDGDNSDISYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  I  F
                    Query_8392   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTTAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTAGCATCTT  90
V  95.2% (275/289)  IGHV5-51*01  6    ...........................G.................................................G.....C..G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  I  K  Y  S  P
                    Query_8392   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATATCAAATACAGTCC  180
V  95.2% (275/289)  IGHV5-51*01  96   ....................................................A........................C..G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8392   181  GTCCTTCCAAGGCCAGGTCTCCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTTTGAAGGCCTCGGACACCGC  270
V  95.2% (275/289)  IGHV5-51*01  186  ...................A.................................................CC...................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  T  R  V  G  D  G  D  N  S  D  I  S  Y  G  M  D  V  W  G  Q  G  T  K  V  T  V
                    Query_8392   271  CATCTATTACTGTACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTCTGGGGCCAAGGGACCAAGGTCACCGT  360
V  95.2% (275/289)  IGHV5-51*01  276  ...G.........G.....-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-16*01  17   --------------------.......---------------------------------------------------------------  23
J  95.8% (46/48)    IGHJ6*02     15   -------------------------------------------------.....T.........................C.........  55

                                             
                                        S  S 
                    Query_8392   361  CTCCTCA  367
J  95.8% (46/48)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_124277

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           343     2e-96
IGHD3-16*01                                                                                           10.3    114  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TATGA	CGGG	GGTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATATGACGGGGGTAAGGACGTC	TRYDGGKDV	244	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  I  V  S  G  D  S  I  S  T  T  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_8393   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGACTCCATCAGCACTACTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.0% (234/249)  IGHV4-39*01  49   ...................C...........G...........G..G...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  G  I  Y  Y  T  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8393   91   CTGGAGTGGATTGGGGGTATCTATTATACTGGGAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  94.0% (234/249)  IGHV4-39*01  139  ...............A............G.....G..........................................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                       K  N  Q  F  Y  L  E  L  S  S  V  T  A  A  D  T  A  A  Y  F  C  T  R  Y  D  G  G  K  D  V 
                    Query_8393   181  AAGAACCAGTTTTACCTGGAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGCGTATTTTTGTACGAGATATGACGGGGGTAAGGACGTC  270
V  94.0% (234/249)  IGHV4-39*01  229  ...........C.C....A.................................T.....AC...G.....---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-16*01  5    ---------------------------------------------------------------------.....----------------  9
J  97.8% (44/45)    IGHJ6*02     18   ------------------------------------------------------------------------------....T.......  29

                                                                       
                                       W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8393   271  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  303
J  97.8% (44/45)    IGHJ6*02     30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_124276

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           251     9e-69
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACAGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACAGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	17	9	0	65.4
CDR1-IMGT	30	53	24	11	13	0	45.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	201	41	0	83.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  T  W  V  R  Q  P  P  G  K  G  L  E  
                    Query_8394   4    CCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTTAGCAACTATGCCATGACCTGGGTCCGCCAGCCCCCAGGGAAGGGACTGGAGT  93
V  83.1% (201/242)  IGHV4-34*01  50   .....TCC...A....C..T.T..AT..TGGGT....C..TGGT..CTA.TG..G....A......................G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  L  S  L  D  M  S  K  K  
                    Query_8394   94   GGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGCGTCTCCTTATCATTAGACATGTCCAAGAAGC  183
V  83.1% (201/242)  IGHV4-34*01  140  ............................C..................C..A.......A...A..A.....G......C.........C.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  V  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y  
                    Query_8394   184  AGTTCTCCGTGAAGGTGACGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAACAGTAAAGGGGGTTATTACTGTCTACC  273
V  83.1% (201/242)  IGHV4-34*01  230  ........C.....C...GC..........................G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD3-22*01  20   -------------------------------------------------------------------------..........-------  29

                                      ------------------->                                 
                                      Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  A  S  S 
                    Query_8394   274  AGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGCCTCCTCA  326
J  97.5% (39/40)    IGHJ6*02     23   -------------................................T.......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_124271

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           327     9e-92
IGHD3-9*01                                                                                            29.5    2e-04
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATCCAC	GTATAACGATGTTTTGACTGG	CCAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATCCACGTATAACGATGTTTTGACTGGCCATAACTGGTTCGACCCC	ARGSTYNDVLTGHNWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  I  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8395   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACTATCTATACCATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-21*01  47   ..........................................G..G.....G....A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  G  A  S  G  A  Y  A  F  Y  A  D  S  L  K  G  Q  F  T  V  S  R  D  N  A  
                    Query_8395   91   AGTGGGTCTCAGCCATTGGTGCTAGTGGTGCTTACGCGTTCTACGCAGACTCACTGAAGGGCCAATTCACCGTCTCCAGAGACAACGCCA  180
V  92.0% (229/249)  IGHV3-21*01  137  ...........T.....A..AG....A..AG....ATA.A.............G.........G.......A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  G  S  T  Y  N  D  V  
                    Query_8395   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCTGTCTATTACTGTGCGAGAGGATCCACGTATAACGATGTTT  270
V  92.0% (229/249)  IGHV3-21*01  227  ....................................C...............G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD3-9*01   1    ----------------------------------------------------------------------------....T.....A...  14

                                      IMGT--------------------->                                  
                                      L  T  G  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8395   271  TGACTGGCCATAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  90.5% (19/21)    IGHD3-9*01   15   .......-----------------------------------------------------  21
J  100.0% (49/49)   IGHJ5*02     3    -----------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_65166

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              54.5    1e-11 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACGC	CTAGGGTGCGGGGAGTTATTAT	TCTCAAGACG	GGGGC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8396   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGCGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................A...........GG.......A.......T..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_8396   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAATCCGTCCCTCCAGAGTCGAGTTACCATATCCGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..................................G............C.........A...................A..A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT---------------------------------------------------->                           
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  A  *  G  A  G 
                    Query_8396   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACGCCTAGGGTGCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (20/22)    IGHD3-10*01  7    -----------------------------------------------------------------------------...T...T.....  19

                                                                                        
                                       S  Y  Y  S  Q  D  G  G  Q  G  T  L  V  P  V  S  S
                    Query_8396   271  AGTTATTATTCTCAAGACGGGGGCCAGGGAACCCTGGTCCCCGTCTCCTC  320
D  90.9% (20/22)    IGHD3-10*01  20   .........-----------------------------------------  28
J  96.8% (30/31)    IGHJ4*02     16   -------------------....................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_124273

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           375     3e-106
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTTGTGG	TACTCTGGTTCGGGGAGT	AAAACCCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTTGTGGTACTCTGGTTCGGGGAGTAAAACCCATTTTGACTCC	ARGLWYSGSGSKTHFDS	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_8397   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.0% (245/250)  IGHV4-31*03  49   .............................................................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8397   91   CTGGAGTGGATTGGGTACATTTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATTTCAGTAGACACGTCT  180
V  98.0% (245/250)  IGHV4-31*03  139  ....................C.....................................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  W  Y  S  G  S 
                    Query_8397   181  AAGAACCAGTTCTCCCTGAAGCTGCGCTCTGCGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGTTTGTGGTACTCTGGTTCG  270
V  98.0% (245/250)  IGHV4-31*03  229  ........................A......T......................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  5    ------------------------------------------------------------------------------....A.......  16

                                      MGT-------------------->                                  
                                       G  S  K  T  H  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8397   271  GGGAGTAAAACCCATTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  94.4% (17/18)    IGHD3-10*01  17   ......----------------------------------------------------  22
J  97.7% (42/43)    IGHJ4*02     6    ---------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_124272

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*10                                                                                           391     6e-111
IGHD2-15*01                                                                                           10.3    133   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*10	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCTCCTGC	GTAGC	CGAGTCGGTGTG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGATCTCCTGCGTAGCCGAGTCGGTGTGGACTCC	ATDLLRSRVGVDS	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  A  C  K  A  S  G  G  T  F  S  S  S 
                    Query_8398   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCAGTGAAGGTCGCCTGCAAGGCCTCTGGAGGCACCTTCAGCAGCTCT  91
V  93.1% (270/290)  IGHV1-69*10  7    .................G....................................T..........T......................A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  V  P  I  L  E  A  A  K  Y  A  Q 
                    Query_8398   92   TCTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCGTCCCTATACTTGAAGCAGCTAAGTACGCACAG  181
V  93.1% (270/290)  IGHV1-69*10  97   G......G.................................................A.......C....GTAT...A..C.........  186
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  L  G  I  A  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  A  D  K  S  T  T  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 
                    Query_8398   182  AAGTTCCAGGGCAGAGTCACGATGACCGCGGACAAATCCACGACCACAGCCTACATGGAGCTGAGTAGCCTGAGATCTGAAGACACGGCC  271
V  93.1% (270/290)  IGHV1-69*10  187  .......................T...................G.....................C..............G.........  276
                                       K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><--------------CDR3-IMGT-------------->                                
                                       V  Y  Y  C  A  T  D  L  L  R  S  R  V  G  V  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8398   272  GTCTATTACTGTGCGACAGATCTCCTGCGTAGCCGAGTCGGTGTGGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  354
V  93.1% (270/290)  IGHV1-69*10  277  ..G.............G...---------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                  
D  100.0% (5/5)     IGHD2-15*01  18   ----------------------------.....--------------------------------------------------  22
J  97.4% (37/38)    IGHJ4*02     9    ---------------------------------------------....A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_273645

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           304     1e-84
IGHD3-3*01                                                                                            23.8    0.011
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTCTTTAATG	ACGATTATTGGAGTG	ATGATTTTCGTCGACACCTAGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCTTTAATGACGATTATTGGAGTGATGATTTTCGTCGACACCTAGGGCTTGACAAC	ARHVFNDDYWSDDFRRHLGLDN	246	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	22	8	0	73.3
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  V  S  V  T  A  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_8399   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGTCTCTGTCACTGCCAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  88.8% (222/250)  IGHV4-39*01  50   .....TCC...A....C.............G...CA...GCAGT............................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  P  V  T  I  S  V  H  T  S  
                    Query_8399   94   TGGAGTGGATTGGAAATATCTATTATAGTGGGACCACCTACTACAACCCCTCCCTCAAGAGTCCAGTCACCATCTCCGTGCACACGTCCA  183
V  88.8% (222/250)  IGHV4-39*01  140  .............G.G.................G...............G.............G.........A.....AG.........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  H  V  F  N  D  D  Y  
                    Query_8399   184  AGAATCAGTTCTCCCTGAGGCTGAATTCTGTGACCGCCGCAGACTCGGCTGTATATTACTGTGCGAGACATGTCTTTAATGACGATTATT  273
V  88.8% (222/250)  IGHV4-39*01  230  ....C.............A.....GC..................A.......G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD3-3*01   6    ---------------------------------------------------------------------------------......T..  14

                                      -CDR3-IMGT--------------------------->                                  
                                      W  S  D  D  F  R  R  H  L  G  L  D  N  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_8399   274  GGAGTGATGATTTTCGTCGACACCTAGGGCTTGACAACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  345
D  93.3% (14/15)    IGHD3-3*01   15   ......------------------------------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    ------------------------------.....T........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_273644

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD3-10*01                                                                                           10.3    115  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCATGTCCCC	ATTAC	CTCCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCATGTCCCCATTACCTCCATTGACTTC	ARAHVPITSIDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  A  I  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8400   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCGCCATCAGTGGTTATTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   ...................C.............T........A....C.......G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  N  G  N  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  K 
                    Query_8400   91   TGGATTGGCTATATCTATTACAATGGAAACACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCGAAGAAA  180
V  91.4% (223/244)  IGHV4-59*01  139  ........G.............G...G.G....A..................................A...G..........C.....C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  K  M  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  V  P  I  T  S  I  D 
                    Query_8400   181  CACTTCTCCCTGAAGATGACCTCCATGACCGCTGCGGACACGGCCGTCTACTACTGTGCGAGAGCCCATGTCCCCATTACCTCCATTGAC  270
V  91.4% (223/244)  IGHV4-59*01  229  ..G............C...G...TG......................G..T.............--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-10*01  3    ---------------------------------------------------------------------------.....----------  7
J  92.7% (38/41)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                 
                                       F  W  G  L  G  T  L  V  T  V  S  S 
                    Query_8400   271  TTCTGGGGCCTGGGAACCCTGGTCACCGTCTCGTCA  306
J  92.7% (38/41)    IGHJ4*02     12   .A........A.....................C...  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_273647

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           332     3e-93
IGHD4-17*01                                                                                           21.8    0.041
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCC	CTACGGTGACT	GCGTGGGGT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCCTACGGTGACTGCGTGGGGTAACTGGTTCGACCCC	ARGPTVTAWGNWFDP	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  N  F  Y  W  S  W  I  R  Q  F  P  G  K  G 
                    Query_8401   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAATTTCTACTGGAGCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  92.7% (230/248)  IGHV4-31*03  49   ................................................GG..A......................CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  Y  S  G  S  A  Y  S  K  P  S  L  E  S  R  V  T  I  S  L  D  T  S 
                    Query_8401   91   CTGGAGTGGATTGGGTACATCTCTTACAGTGGGAGCGCCTACTCTAAGCCGTCCCTCGAGAGTCGAGTGACCATTTCACTGGACACGTCT  180
V  92.7% (230/248)  IGHV4-31*03  139  ......................A.............A......AC..C.........A..........T.....A...G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  M  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  T  V  T  A  W 
                    Query_8401   181  AAGAACCAGTTCTCCCTGAAGATGAACTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGGGGCCCTACGGTGACTGCGTGG  270
V  92.7% (230/248)  IGHV4-31*03  229  .....................C...G...........................G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (11/11)   IGHD4-17*01  4    -------------------------------------------------------------------------...........------  14

                                      ----------------->                                  
                                       G  N  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_8401   271  GGTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  322
J  98.0% (48/49)    IGHJ5*02     3    ---.....................................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_273646

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCGGACGAATA	ACTATGGTCCGGGGAGT	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGACATCGGACGAATAACTATGGTCCGGGGAGTCCCTTTGACTAC	SRHRTNNYGPGSPFDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	253	8	7	1	0	87.5
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  S  S  T  Y  Y  W  A  W  I  R  Q  P  P  G  K  G  
                    Query_8402   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCATCAGCAGTAGCACTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  90.8% (227/250)  IGHV4-39*01  50   .....TCC...A....C.............G...............T.G...........G...........................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  P  G  G  S  T  Q  Y  I  P  S  L  K  S  R  L  T  M  S  V  D  S  S  
                    Query_8402   94   TGGAGTGGATTGGGAGTATCTATCCTGGTGGGAGCACCCAGTACATCCCGTCCCTCAAGAGTCGACTCACCATGTCCGTGGACTCGTCCA  183
V  90.8% (227/250)  IGHV4-39*01  140  .......................TA.A...........T.C....A...................G.......A.....A...A......  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  R  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  S  R  H  R  T  N  N  Y  G  
                    Query_8402   184  AGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGAGCGCCGCAGACACGGCTGTGTATTACTGTTCGAGACATCGGACGAATAACTATGGTC  273
V  90.8% (227/250)  IGHV4-39*01  230  ..................A..............C............................G.......--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  94.1% (16/17)    IGHD3-10*01  6    ---------------------------------------------------------------------------------........T  14

                                      T------------------>                                  
                                      P  G  S  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8402   274  CGGGGAGTCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  94.1% (16/17)    IGHD3-10*01  15   ........----------------------------------------------  22
J  100.0% (44/44)   IGHJ4*02     5    ----------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_273641

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD3-16*01                                                                                           43.0    2e-08 
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCTAGTCTGGAA	TATGATTACGTTTGGGGGAGTT	CTCACCTCAC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCTAGTCTGGAATATGATTACGTTTGGGGGAGTTCTCACCTCACCTGGTTCGACCCC	AREASLEYDYVWGSSHLTWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  S  I  S  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8403   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCTCCATCAGTAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ...................C.........................T............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  T  G  S  T  K  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8403   91   TGGATTGGGTATATGTATTACACTGGGAGCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAT  180
V  96.3% (236/245)  IGHV4-59*01  139  ..............C.......G............C................A....................................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  E  A  S  L  E  Y  D  Y  V 
                    Query_8403   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGAGCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAAGCTAGTCTGGAATATGATTACGTT  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............C............C....................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (22/22)   IGHD3-16*01  5    ------------------------------------------------------------------------------............  16

                                      -IMGT--------------------------->                                  
                                       W  G  S  S  H  L  T  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8403   271  TGGGGGAGTTCTCACCTCACCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  337
D  100.0% (22/22)   IGHD3-16*01  17   ..........---------------------------------------------------------  26
J  100.0% (47/47)   IGHJ5*02     5    --------------------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_273643

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           414     5e-118
IGHD2-2*01                                                                                            21.8    0.045 
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCCG	GTAGTACCAGC	GACCTGGAGTT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCCGGTAGTACCAGCGACCTGGAGTTTGGACGTC	ARFPVVPATWSLDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  G  S  Y
                    Query_8404   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCGGCAGCTA  90
V  95.8% (277/289)  IGHV1-69*01  6    ..................G...............................................................A.......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        T  I  S  W  V  R  Q  G  P  G  Q  G  L  E  W  M  G  G  I  K  P  S  F  G  T  T  N  Y  A  Q
                    Query_8404   91   TACTATCAGCTGGGTGCGACAGGGCCCTGGACAAGGTCTTGAGTGGATGGGAGGGATCAAGCCTAGCTTTGGAACAACAAACTACGCACA  180
V  95.8% (277/289)  IGHV1-69*01  96   .G.....................C............G......................TC....T......T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_8404   181  GAAGTTCCAGGACAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGTAGCCTGAGATCTGAGGACACGGC  270
V  95.8% (277/289)  IGHV1-69*01  186  ...........G......................................................C.......................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                 
                                        V  Y  Y  C  A  R  F  P  V  V  P  A  T  W  S  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8404   271  CGTGTATTACTGTGCGAGATTCCCGGTAGTACCAGCGACCTGGAGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  358
V  95.8% (277/289)  IGHV1-69*01  276  ...................---------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                      
D  100.0% (11/11)   IGHD2-2*01   12   -------------------------...........----------------------------------------------------  22
J  100.0% (41/41)   IGHJ6*02     22   -----------------------------------------------.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_65160

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHJ6*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCCCTG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTGCTACGATCTGGACGTC	ASPPCYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	267	21	0	92.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_8405   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  92.7% (267/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  D  G  M  A  I  I  Y  P  D  H  S  D  T  R  Y  S  P
                    Query_8405   91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGACGGGATGGCGATCATCTATCCTGATCACTCTGATACCAGATACAGCCC  180
V  92.7% (267/288)  IGHV5-51*01  96   .....................G.T..................GT......G..............G.G......................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  P  A  D  N  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  P  D  A  A
                    Query_8405   181  GTCCTTCCAAGGCCACGTCACCATCCCAGCCGACAACTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCCCGGACGCCGC  270
V  92.7% (267/288)  IGHV5-51*01  186  ...............G.........T..........G....T.........................A...........T.....A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  C  Y  D  L  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_8405   271  CATATACTACTGTGCGAGTCCTCCCTGCTACGATCTGGACGTCTGGGGCCAAGGGGCCACGGTCACCGTCTCGTCA  346
V  92.7% (267/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  91.8% (45/49)    IGHJ6*02     14   ---------------------------.....G.A....................A................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_273648

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           369     2e-104
IGHD2-2*01                                                                                            23.8    0.011 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAG	TTGTAGTAGTAACACCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGTTGTAGTAGTAACACCTGCTACTACGAAATGGACGTC	ARVSCSSNTCYYEMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	240	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8406   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (240/244)  IGHV4-59*01  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  A  K  N 
                    Query_8406   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGGTAGACACGGCCAAGAAC  180
V  98.4% (240/244)  IGHV4-59*01  139  .......................................................................A.........T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  C  S  S  N  T  C  Y 
                    Query_8406   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGTAAGTTGTAGTAGTAACACCTGCTAC  270
V  98.4% (240/244)  IGHV4-59*01  229  ...............................................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (16/18)    IGHD2-2*01   7    --------------------------------------------------------------------...........C..G...----  24
J  96.2% (50/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8406   271  TACGAAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  96.2% (50/52)    IGHJ6*02     15   ....GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_65161

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           411     5e-117
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	276	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  E  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_8407   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGGAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.5% (276/289)  IGHV5-51*03  6    ............................A................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_8407   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.5% (276/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_8407   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.5% (276/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8407   271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.5% (276/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_8407   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_67759

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            329     3e-92
IGHD2-15*01                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	GTGGTA	CTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACGTGGTACTCGGGGTTTTGACTAC	ARHLGTRGTRGFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	22	2	3	81.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	246	230	13	3	93.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_8408   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  87
V  93.5% (230/246)  IGHV4-4*02   49   ...............................G.....T........GTA.......................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  G  T  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  I  I  S  L  D  T  S  K 
                    Query_8408   88   GAGTGGATTGGGGGAACCTATCACAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCACTAGACACGTCCAAG  177
V  93.5% (230/246)  IGHV4-4*02   139  .............A..T......T...........................................C.......G......A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  R  G  T  R 
                    Query_8408   178  AATCAGTTCTCCCTGAATCTCAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACGTGGTACTCGG  267
V  93.5% (230/246)  IGHV4-4*02   229  ..C..............G..G.G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-15*01  15   -------------------------------------------------------------------------------......-----  20

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_8408   268  GGTTTTGACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  313
J  97.7% (42/43)    IGHJ4*02     6    ---.........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_215108

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           37.2    9e-07
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCTT	CTATGATAGCAGTGGTTATTAC	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCTTCTATGATAGCAGTGGTTATTACCACTTTGACTAT	VVFYDSSGYYHFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	238	1	1	0	0	100
Total	N/A	N/A	238	226	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  A  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8409   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGCCGCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.0% (226/238)  IGHV4-59*01  49   .......................C.......G.T........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8409   91   TGGATTGGTTATATCTATCACAGTGGGACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.0% (226/238)  IGHV4-59*01  139  ........G.........T.........G...............C.............................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  F  Y  D  S  S  G  Y  Y  H 
                    Query_8409   181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGTGGTCTTCTATGATAGCAGTGGTTATTACCAC  270
V  95.0% (226/238)  IGHV4-59*01  229  ...................GC..........................G..T.......--------------------------------  286
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                                  
D  95.5% (21/22)    IGHD3-22*01  7    -----------------------------------------------------------------.........T............---  28
J  95.6% (43/45)    IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_8409   271  TTTGACTATTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  313
J  95.6% (43/45)    IGHJ4*02     6    ........C.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_215109

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           327     9e-92
IGHD5-12*01                                                                                           12.2    31   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GTCGAGGGGGT	CGATTA	GGGAAAAAAGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTCGAGGGGGTCGATTAGGGAAAAAAGTTTTGACCAC	AKSRGSIREKSFDH	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	228	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  N  N  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8410   1    GGTCCCTGAGACTCTCCTGTGCAACGTCTGGATTCACCTTTAACAACTTTGCCATGAGCTGGGTCCGACAGGCTCCAGGGAAGGGGCTGG  90
V  92.3% (228/247)  IGHV3-23*01  47   .......................G.C................G..G..A..................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  F  S  P  S  G  R  T  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  
                    Query_8410   91   AGTGGGTCTCATATTTTAGTCCAAGTGGTCGTACCACATCCTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACATTTCCA  180
V  92.3% (228/247)  IGHV3-23*01  137  ...........GC.A.....GGT......G...G.....A............................................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  T  L  T  A  E  D  T  A  V  Y  Y  C  A  K  S  R  G  S  I  R  E  
                    Query_8410   181  AGAACACACTGTATCTGCAAATGAACACCCTGACAGCCGAGGACACGGCCGTATATTACTGTGCGAAGTCGAGGGGGTCGATTAGGGAAA  270
V  92.3% (228/247)  IGHV3-23*01  227  .......G...................G.....G.................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD5-12*01  17   ------------------------------------------------------------------------------......------  22

                                      ------------->                                  
                                      K  S  F  D  H  W  G  P  G  T  L  V  T  V  S  S  
                    Query_8410   271  AAAGTTTTGACCACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  318
J  95.3% (41/43)    IGHJ4*02     6    -----......T.........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_67758

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            321     7e-90
IGHD1-26*01                                                                                           18.0    0.60 
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAACAGTTTGTTGGCACCTG	AGTGGGAGC	CTGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACAGTTTGTTGGCACCTGAGTGGGAGCCTGATGATGCTTTTGATATC	ARVNSLLAPEWEPDDAFDI	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	18	3	0	85.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  A  S  I  S  S  R  S  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_8411   1    GGTCCCTGAGACTCTCCTGTGCTGTCTCTGGTGCCTCCATCAGCAGCAGAAGCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  91.2% (227/249)  IGHV4-4*02   47   ..A.....TCC...A....C.............G............T..T.A......................................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  G  G  N  T  S  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  K  S  
                    Query_8411   91   TGGAGTGGATTGGGGAGATCTATCATGGTGGGAATACCAGCTACAACCCGTCCCTCAAGAGTCGACTTACTATATCAGTAGACAAGTCCA  180
V  91.2% (227/249)  IGHV4-4*02   137  ................A.........A......GC....A.........................G.C..C...................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  Q  F  S  L  Q  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  S  L  L  A  P  
                    Query_8411   181  AGAACCAATTCTCCCTGCAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGAGAGTTAACAGTTTGTTGGCACCTG  270
V  91.2% (227/249)  IGHV4-4*02   227  .......G.........A.......C..........................G................---------------------  295
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       

                                      -IMGT----------------------->                                  
                                      E  W  E  P  D  D  A  F  D  I  W  G  Q  G  T  L  A  I  V  S  S  
                    Query_8411   271  AGTGGGAGCCTGATGATGCTTTTGATATCTGGGGCCAAGGGACATTGGCCATCGTCTCTTCAG  333
D  100.0% (9/9)     IGHD1-26*01  6    .........------------------------------------------------------  14
J  94.0% (47/50)    IGHJ3*02     1    -------------...............................A...T..C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_215102

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           366     2e-103
IGHD1-26*01                                                                                           16.1    2.2   
IGHJ5*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGCCCTTTTA	TGGGGGCTACT	TGGATT	GACCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGCCCTTTTATGGGGGCTACTTGGATTGACCCC	ARCPFMGATWIDP	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8412   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (241/248)  IGHV3-33*01  47   ................................................A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  Y  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8412   91   AGTGGGTGGCAATTATATACTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  97.2% (241/248)  IGHV3-33*01  137  ...........G......GG.................................................................T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  I  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  C  P  F  M  G  A  T  
                    Query_8412   181  AGAACACGCTGTATCTGCAAATGATCAACCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGATGCCCTTTTATGGGGGCTACTT  270
V  97.2% (241/248)  IGHV3-33*01  227  ........................A..G........................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD1-26*01  8    ------------------------------------------------------------------------------....A......-  18

                                      ---------->                                  
                                      W  I  D  P  W  G  R  G  P  L  V  T  V  S  S  
                    Query_8412   271  GGATTGACCCCTGGGGCCGGGGACCCCTGGTCACCGTCTCCTCAG  315
J  95.0% (38/40)    IGHJ5*02     12   -----.............A....A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_215100

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     4e-95
IGHD3-10*02                                                                                           14.1    8.2  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTGGGTGGAATTA	ACTATGT	CTAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTGGGTGGAATTAACTATGTCTACGACTAC	AKDVGGINYVYDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  A  Y  A  M  S  W  V  R  Q  A  P  G  R  G  P  
                    Query_8413   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTTAACGCCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAGGGGGCCGG  90
V  93.2% (233/250)  IGHV3-23*01  47   ...............................A..........G.AG............C......................A.....T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  T  G  G  R  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  S  D  N  S  
                    Query_8413   91   AGTGGGTCTCAACTATCAGTGGTACTGGTGGTAGAACATACTACGCAGACTCCGTGAAAGGCCGGTTCACCATCTCCAGCGACAACTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  ...........G....T.......G.........C.......................G....................A.....T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  V  G  G  I  N  Y  
                    Query_8413   181  AGAACACACTGTTTCTGCAAATGAACAGCCTCAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATGTGGGTGGAATTAACTATG  270
V  93.2% (233/250)  IGHV3-23*01  227  .......G....A..................G......................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-10*02  6    ------------------------------------------------------------------------------------......  11

                                      ---------->                                  
                                      V  Y  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_8413   271  TCTACGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  315
D  100.0% (7/7)     IGHD3-10*02  12   .--------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -----..................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_215101

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           353     1e-99
IGHD2-2*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCCAGCACGTTATTTATGTGGTTCCC	GCTGCTAT	TTAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCCCAGCACGTTATTTATGTGGTTCCCGCTGCTATTTATTTTGACTAC	ARAQHVIYVVPAAIYFDY	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_8414   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.2% (238/250)  IGHV4-31*01  49   .............................................................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  D  I  Y  N  S  G  T  T  Y  Y  N  P  S  L  K  S  Q  V  T  I  S  L  D  A  S 
                    Query_8414   91   CTGGAGTGGATTGGGGACATCTATAACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCAAGTCACCATATCACTAGACGCGTCT  180
V  95.2% (238/250)  IGHV4-31*01  139  ...............T........T.........G.............................T...T.........G.....A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  N  Q  F  S  L  Q  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  Q  H  V  I  Y  V 
                    Query_8414   181  AAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGCGAGCCCAGCACGTTATTTATGTG  270
V  95.2% (238/250)  IGHV4-31*01  229  ..................A......G..............................T.........A...--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      -IMGT--------------------->                                 
                                       V  P  A  A  I  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_8414   271  GTTCCCGCTGCTATTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  330
D  100.0% (8/8)     IGHD2-2*01   21   ------........----------------------------------------------  28
J  100.0% (42/42)   IGHJ4*02     6    ------------------..........................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_333982

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           336     1e-94
IGHD3-3*01                                                                                            10.3    118  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATC	GAGTG	CCCTTCCAATTTG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCGAGTGCCCTTCCAATTTGACGGTATGGACGTC	ARNRVPFQFDGMDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8415   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTTCTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.2% (229/243)  IGHV4-59*08  49   .......................................A..AG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  N  G  Y  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_8415   91   TGGATTGGCTATATGTATTACAATGGGTACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGTCCAAGAAC  180
V  94.2% (229/243)  IGHV4-59*08  139  ........G.....C.......G....AG.......................................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       L  F  S  L  M  L  T  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  N  R  V  P  F  Q  F  D  G 
                    Query_8415   181  CTGTTCTCCCTGATGCTGACCTCTGTGACCTCCGCAGACACGGCCGTGTATTACTGTGCGAGAAATCGAGTGCCCTTCCAATTTGACGGT  270
V  94.2% (229/243)  IGHV4-59*08  229  .A...........A.....G..........G................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-3*01   16   -------------------------------------------------------------------.....------------------  20
J  95.7% (45/47)    IGHJ6*02     16   -------------------------------------------------------------------------------------.....  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_8415   271  ATGGACGTCTGGGGCCAAGGGACGACGGTCAGCGTCTCCTCA  312
J  95.7% (45/47)    IGHJ6*02     21   .......................C.......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_215107

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           363     1e-102
IGHD3-9*01                                                                                            37.2    9e-07 
IGHJ4*01                                                                                              50.7    2e-10 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-9*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	GGGGAC	TACGATATTTTGACTGGTT	C	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	111	3	0	97.4
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8416   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (240/248)  IGHV3-15*01  47   .......T..................................................C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  S  K  T  D  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_8416   91   AGTGGGTTGGCCGTATTAGAAGTAAAACTGATGGTGAGACAACAGACTACGCTGCTCCCGTGAAAGGCAGATTTACCATCTCAAGAGATG  180
V  96.8% (240/248)  IGHV3-15*01  137  ..................A...C.............G..................A.................C................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT---------------------------------------------------->                      
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  G  D  Y  D  I  L  T  
                    Query_8416   181  ATTCAAAAAACACGCTGTATCTACAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTGGGGACTACGATATTTTGACTG  270
V  96.8% (240/248)  IGHV3-15*01  227  ......................G.............................................----------------------  294
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  100.0% (19/19)   IGHD3-9*01   5    --------------------------------------------------------------------------................  20

                                                                          
                                      G  S  G  P  G  T  L  V  T  V  S  S  
                    Query_8416   271  GTTCGGGCCCTGGAACCCTGGTCACCGTCTCCTCAG  306
D  100.0% (19/19)   IGHD3-9*01   21   ...---------------------------------  23
J  93.8% (30/32)    IGHJ4*01     17   ----.....AA.........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_215105

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            420     7e-120
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	274	5	0	98.2


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_8417  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  98.2% (274/279)  IGHV6-1*01  26   ...........................................................G......G....AG.................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_8417  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.2% (274/279)  IGHV6-1*01  116  ..........................................................................................  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_8417  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.2% (274/279)  IGHV6-1*01  206  ..............A...........................................................................  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------CDR3-IMGT--------->                                  
                                     C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8417  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  98.2% (274/279)  IGHV6-1*01  296  .........---------------------------------------------------------  304
                                     C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02    4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_88675

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           310     1e-86
IGHD5-12*01                                                                                           12.2    30   
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCC	GTGGAT	TAAGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCGTGGATTAAGCTTC	ATRGLSF	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  D  M  N  W  L  R  Q  A  P  G  K  G  P  
                    Query_8418   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACTTTCAGTAATTACGACATGAACTGGCTCCGCCAGGCTCCTGGGAAGGGGCCGG  90
V  90.2% (222/246)  IGHV3-48*03  47   .....................C...............C.......G...T..A.........G.............A..........T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  D  I  T  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_8418   91   AGTGGGTCTCATCCATTAGTAGTCGTGGAGATATCACATACTACGCGGACTCAGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.2% (222/246)  IGHV3-48*03  137  .......T....A..........A....TAG..C..T.........A.....T...A.................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  S  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  T  R  G  L  S  F  W  G  
                    Query_8418   181  AGAACTCACTGTCCCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTCTTTATTACTGTGCGACCCGTGGATTAAGCTTCTGGGGCC  270
V  90.2% (222/246)  IGHV3-48*03  227  ............AT......................C...G.........G...............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD5-12*01  1    ---------------------------------------------------------------------......---------------  6
J  94.3% (33/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  A  Q  V  T  V  S  S  
                    Query_8418   271  AGGGAGCCCAGGTCACCGTCTCCTCAG  297
J  94.3% (33/35)    IGHJ4*02     22   .....A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_88674

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           357     1e-100
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCATGC	ATGGTTCGGGGAG	AAGTACGATGGCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCATGCATGGTTCGGGGAGAAGTACGATGGCTACTACTTTGACTAC	ARDHAWFGEKYDGYYFDY	239	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	24	0	0	100
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	23	1	0	95.8
FR3-IMGT	125	238	114	113	1	0	99.1
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	232	230	2	0	99.1


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_8419   15   GTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATAT  104
V  99.1% (230/232)  IGHV3-33*01  65   ..........................................................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      W  Y  D  G  S  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_8419   105  GGTATGATGGAAGTAAGAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACACTGTATCTGC  194
V  99.1% (230/232)  IGHV3-33*01  155  ................T..............................................................G..........  244
                                      W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><----------------------CDR3-IMGT--------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  H  A  W  F  G  E  K  Y  D  G  Y  Y  
                    Query_8419   195  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGACCATGCATGGTTCGGGGAGAAGTACGATGGCTACTACT  284
V  99.1% (230/232)  IGHV3-33*01  245  ....................................................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (13/13)   IGHD3-10*01  9    ----------------------------------------------------------.............-------------------  21
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8419   285  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  326
J  100.0% (48/48)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_88671

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8420   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8420   91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_8420   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  R  T  L  V  T  V  S  S  
                    Query_8420   271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGAGAACCCTCGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  95.3% (41/43)    IGHJ4*02     6    -----------------------..................G.......G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_88670

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           249     3e-68
IGHD2-8*02                                                                                            16.1    2.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGATGCGGCGGAGTGAATTCGGC	ACTGGTGG	GG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATGCGGCGGAGTGAATTCGGCACTGGTGGGGACTTCTTTGACCAC	ARMRRSEFGTGGDFFDH	246	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	20	10	0	66.7
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	94	20	0	82.5
CDR3-IMGT (germline)	246	248	3	3	0	0	100
Total	N/A	N/A	245	202	43	0	82.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  L  R  S  V  S  F  L  W  S  W  V  R  Q  D  P  G  K  G  
                    Query_8421   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCCTGAGGAGTGTGTCTTTCCTCTGGAGCTGGGTCCGCCAGGACCCAGGGAAGGGCC  93
V  82.4% (202/245)  IGHV4-31*03  50   .....TCC...A.......................A.C..C....GTGG..A.TA..........A........C...............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  R  Y  Y  S  G  S  S  R  Y  N  P  S  L  G  S  R  V  S  M  S  L  D  T  S  
                    Query_8421   94   TGGAGTGGATTGGTTACAGGTATTACAGTGGAAGTAGTCGGTATAATCCGTCCCTCGGGAGTCGAGTTTCCATGTCACTAGACACGTCTA  183
V  82.4% (202/245)  IGHV4-31*03  140  .............G....TC...........G..C.CCTAC..C..C.........AA..........A....A...G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  Q  F  S  L  K  L  T  S  V  T  T  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  F  G  
                    Query_8421   184  GGAACCAATTTTCCCTGAAGTTGACCTCAGTGACGACCGCGGACACGGCCATCTATTACTGTGCGCGGATGCGGCGGAGTGAATTCGGCA  273
V  82.4% (202/245)  IGHV4-31*03  230  A......G..C.........C...G...T.....TG..............G.G............-------------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD2-8*02   11   -----------------------------------------------------------------------------------------.  11

                                      GT-------------------->                                  
                                      T  G  G  D  F  F  D  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_8421   274  CTGGTGGGGACTTCTTTGACCACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  330
D  100.0% (8/8)     IGHD2-8*02   12   .......--------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*02     1    ---------...A.......T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_88673

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           372     2e-105
IGHD6-13*01                                                                                           21.8    0.039 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGAG	AGCAGCAGCTG	AA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGAGCAGCAGCTGAATGACTAC	ARDREQQLNDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  R  V  R  Q  A  P  G  K  G  L  
                    Query_8422   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACCGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.6% (244/250)  IGHV3-21*01  47   ...........................................................T..............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  V  S  S  I  S  S  S  S  S  Y  M  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  D  A  
                    Query_8422   91   AGTGCGTCTCATCCATTAGTAGTAGCAGTAGTTACATGTACTACGCAGACTCAGTGAGGGGCCGATTCACCATCTCCAGAGACGACGCCA  180
V  97.6% (244/250)  IGHV3-21*01  137  ....G....................T...........A...................A.........................A......  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  E  Q  Q  L  N  
                    Query_8422   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGAGAGCAGCAGCTGAATG  270
V  97.6% (244/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  7    ---------------------------------------------------------------------------...........----  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8422   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (41/41)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_222563

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           296     2e-82
IGHD3-16*01                                                                                           12.2    31   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGG	TGGGGG	GGCCCCGGTAT	TACGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGGTGGGGGGGCCCCGGTATTACGCTATGGACGTC	AREGVGGPRYYAMDV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	217	28	0	88.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  M  S  D  F  Y  W  S  W  L  R  Q  P  P  G  K  A  L  E 
                    Query_8423   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGCTTCCATGAGTGACTTCTACTGGAGTTGGCTCCGTCAGCCCCCAGGGAAGGCACTGGAG  90
V  88.6% (217/245)  IGHV4-59*01  49   ..................A............GC.....C...AGT.A.........C...A....G................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  T  N  H  N  P  S  L  R  N  R  V  I  I  S  V  D  R  S  K  N 
                    Query_8423   91   TGGATTGGGTACATCTATTACACTGGGAGTACCAACCACAATCCCTCCCTCAGGAATCGAGTCATCATTTCAGTAGACAGGTCCAAGAAC  180
V  88.6% (217/245)  IGHV4-59*01  139  ...........T..........G......C......T....C..........A..G........C...A..........C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  E  G  V  G  G  P  R  Y  Y 
                    Query_8423   181  CAGTTCTCCCTGAAGTTGACTTCTGTGACCGCTGCGGACACGGCCATATATTATTGTGCGAGAGAGGGGGTGGGGGGGCCCCGGTATTAC  270
V  88.6% (217/245)  IGHV4-59*01  229  ...............C...GC........................G.G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------......--------------  22
J  97.9% (47/48)    IGHJ6*02     15   ---------------------------------------------------------------------------------------...  17

                                      ----------->                                 
                                       A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8423   271  GCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  315
J  97.9% (47/48)    IGHJ6*02     18   .G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_23567

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD1-26*01                                                                                           12.2    31   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTACCTTGATTC	GGGAGC	GTGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACTACCTTGATTCGGGAGCGTGGTGGTTCGACCCC	AKDYLDSGAWWFDP	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  T  C  A  M  T  W  V  R  Q  G  P  G  K  G  L  
                    Query_8424   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAGCACCTGTGCCATGACCTGGGTCCGCCAGGGACCAGGGAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-23*01  47   ....................................C........G..A........G..............CT................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  M  T  A  S  G  H  Y  T  Y  Y  A  H  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8424   91   AGTGGGTCTCAAGTATGACTGCTAGTGGACATTACACATATTACGCACACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.2% (228/250)  IGHV3-23*01  137  ...........GC...T.G..G......TGG.AG......C......G..........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  T  S  L  R  D  E  D  T  A  V  Y  F  C  A  K  D  Y  L  D  S  G  A  
                    Query_8424   181  AGAACACGCTGTATCTGCAAATGACTAGCCTGAGAGACGAGGACACGGCCGTATATTTCTGTGCGAAAGACTACCTTGATTCGGGAGCGT  270
V  91.2% (228/250)  IGHV3-23*01  227  ........................AC..........C....................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-26*01  9    ----------------------------------------------------------------------------------......--  14

                                      ------------->                                  
                                      W  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8424   271  GGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (46/46)   IGHJ5*02     6    --..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_41623

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           257     1e-70
IGHD3-10*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTTAGCATGGAC	TGGTACGGGGAGT	CGAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTTAGCATGGACTGGTACGGGGAGTCGACCTACTACTACTACGGGATGGACGTC	ARLSMDWYGESTYYYYGMDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	41	10	0	80.4
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	95	19	0	83.3
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	203	39	0	83.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  M  N  R  H  Y  W  S  W  I  R  Q  P  P  G  G  G  L  E 
                    Query_8425   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGCGGCTCCATGAATAGGCACTATTGGAGTTGGATTCGACAGCCCCCGGGAGGGGGACTGGAG  90
V  83.9% (203/242)  IGHV4-59*08  49   ...................C.........T........C.G...TT....C.....C.....C..G........A..GAA..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  F  I  Y  Y  S  G  T  T  K  S  T  P  S  L  E  R  R  V  S  I  S  V  D  T  T  R  N 
                    Query_8425   91   TGGATTGCGTTCATCTACTACAGTGGGACTACCAAGTCCACCCCCTCCCTCGAGAGGCGCGTCTCCATATCCGTGGACACGACCAGGAAC  180
V  83.9% (203/242)  IGHV4-59*08  139  .......G..AT.....T..........GC.....C.A..A..........A....T..A...A.......A..A......T...A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  G  L  G  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  L  S  M  D  W  Y  G  E  S 
                    Query_8425   181  CAGTTCTCCCTGGGGTTGGGGTCTGTGACCGCCGCAGACACGGCCATTTATTACTGCGCGAGGCTTAGCATGGACTGGTACGGGGAGTCG  270
V  83.9% (203/242)  IGHV4-59*08  229  ............AA.C..A.C........................G.G........T.....----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  92.3% (12/13)    IGHD3-10*01  10   ---------------------------------------------------------------------------....T........--  22

                                      GT------------------------>                                 
                                       T  Y  Y  Y  Y  G  M  D  V  W  G  R  G  T  P  V  T  V  S  S 
                    Query_8425   271  ACCTACTACTACTACGGGATGGACGTCTGGGGCCGAGGGACCCCGGTCACCGTCTCCTCA  330
J  94.8% (55/58)    IGHJ6*02     5    --...............T................A.......A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_89984

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           360     1e-101
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGGTCC	ATTACTATGATAGTA	CTTCTTACTACGGGAGTCGGTTCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGGTCCATTACTATGATAGTACTTCTTACTACGGGAGTCGGTTCCACTTTGACTAC	ARVVHYYDSTSYYGSRFHFDY	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G 
                    Query_8426   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGA  90
V  96.4% (239/248)  IGHV4-61*01  49   .........................................C........................A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_8426   91   CTGGAGTGGATTGGGTACATCTATTACAGAGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTGGACACGTCC  180
V  96.4% (239/248)  IGHV4-61*01  139  .................T...........T....G.......................................A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  V  H  Y  Y  D  S 
                    Query_8426   181  AAGAACCAGTTCTCCCTGCAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGGTGGTCCATTACTATGATAGT  270
V  96.4% (239/248)  IGHV4-61*01  229  ..................A..C..............................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (15/15)   IGHD3-22*01  3    ----------------------------------------------------------------------------..............  16

                                      CDR3-IMGT-------------------------->                                  
                                       T  S  Y  Y  G  S  R  F  H  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_8426   271  ACTTCTTACTACGGGAGTCGGTTCCACTTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  340
D  100.0% (15/15)   IGHD3-22*01  17   .---------------------------------------------------------------------  17
J  97.8% (44/45)    IGHJ4*02     4    -------------------------.......................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_89986

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           335     4e-94
IGHD2-21*01                                                                                           25.7    0.003
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-21*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCGCGCAAAC	TGTGGTGGTGAGTGCT	TCGCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGCGCAAACTGTGGTGGTGAGTGCTTCGCATTTGATGTC	ARRANCGGECFAFDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	16	8	0	66.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	251	37	0	87.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  Q  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  I  F  K  N  T
                    Query_8427   1    GCAGCTGGTGCAGTCTGGAGCTCAGGTGAAGAAGCCTGGGTCGTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGACATCTTCAAAAACAC  90
V  87.2% (251/288)  IGHV1-69*06  6    ..................G...G...................C.......................T.......G..C.....GC.G.TA  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  N  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  G  I  S  P  L  F  G  T  A  T  Y  P  Q
                    Query_8427   91   TGTTATCAACTGGGTGCGACAGGCCCCCGGACAGGGGCCTGAGTGGATGGGAGGGATCAGCCCTCTCTTTGGCACAGCTACTTATCCACA  180
V  87.2% (251/288)  IGHV1-69*06  96   ..C.....G..................T.....A....T....................T....A.......T.....A.AC..CG....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  I  I  T  A  D  K  S  T  S  T  D  Y  L  E  L  S  T  L  R  S  E  D  T  A
                    Query_8427   181  GAAGTTTCAGGACAGAGTCATCATTACCGCGGACAAATCCACGAGCACAGACTACTTGGAGCTGAGTACACTGAGATCTGAAGACACGGC  270
V  87.2% (251/288)  IGHV1-69*06  186  ......C....G........CG............................C....A..........C.GC...........G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  A  N  C  G  G  E  C  F  A  F  D  V  W  G  Q  G  T  T  V  I  V  T  S
                    Query_8427   271  CGTCTACTATTGTGCGAGGCGCGCAAACTGTGGTGGTGAGTGCTTCGCATTTGATGTCTGGGGCCAAGGGACAACGGTCATCGTCACTTC  360
V  87.2% (251/288)  IGHV1-69*06  276  ...G..T..C........------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  93.8% (15/16)    IGHD2-21*01  8    ----------------------------...........T....----------------------------------------------  23
J  93.0% (40/43)    IGHJ3*01     8    -------------------------------------------------.........................T.....C....T....  48

                                        
                                        
                    Query_8427   361  AG  362
J  93.0% (40/43)    IGHJ3*01     49   ..  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_89987

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTGC	ARDSSWNGVDYFDC	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	232	12	0	95.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_8428   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  95.1% (232/244)  IGHV4-59*01  50   .....TCC...A...........................G..................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N  
                    Query_8428   94   GGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAACC  183
V  95.1% (232/244)  IGHV4-59*01  140  .......G...A..T...............................................................C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y  
                    Query_8428   184  AGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTACT  273
V  95.1% (232/244)  IGHV4-59*01  230  ..............C....C.......................................A....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD6-13*01  9    ----------------------------------------------------------------..........----------------  18
J  97.9% (47/48)    IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8428   274  TTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.9% (47/48)    IGHJ4*02     7    ......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_89980

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD4-17*01                                                                                           14.1    8.5  
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGAATAC	AG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGAATACAGCAACTGGGTCGACCCC	ARDSGEYSNWVDP	250	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	135	27	19	2	6	70.4
FR3-IMGT	136	249	114	105	9	0	92.1
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	233	18	6	90.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  V  S  S  G  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_8429   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCGTCAGCAGTGGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGG  90
V  90.7% (233/257)  IGHV4-61*01  49   ...................C...........G.............................G...........................A  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  H  I  Y  N  Y  N  R  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D 
                    Query_8429   91   CTGGAGTGGATCGGTCATATCTATAACTATAACAGAGGGAGCACCAATTATAATCCCTCCCTCCAAAGTCGAGTCACCATATCAGTAGAC  180
V  90.7% (233/257)  IGHV4-61*01  139  ...........T..GT........T..------..T...........C..C..C.........A.G........................  222
                                       L  E  W  I  G  Y  I  Y  Y        S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------CDR3-I
                                       T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  G  E  Y 
                    Query_8429   181  ACATCCAAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATTCCGGTGAATAC  270
V  90.7% (233/257)  IGHV4-61*01  223  ..G........................C...G...........................G.................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  90.0% (9/10)     IGHD4-17*01  7    --------------------------------------------------------------------------------......C...  16

                                      MGT-------------->                                  
                                       S  N  W  V  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8429   271  AGCAACTGGGTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  98.0% (49/50)    IGHJ5*02     2    --.......T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_89981

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         300     9e-84
IGHD3-9*01                                                                                            14.1    8.7  
IGHJ2*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGACCGATAC	TGACTGG	GGTGGTCCCACAGGGCTCTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACCGATACTGACTGGGGTGGTCCCACAGGGCTCTTCTGGTACTTCGATCTC	AKTDTDWGGPTGLFWYFDL	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	218	26	0	89.3


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  V  V  S  G  Y  S  I  N  N  G  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  L 
                    Query_8430     1    ACCCTGTCCCTCACCTGCGTTGTGTCTGGTTACTCCATCAACAATGGTTACTACTGGGGCTGGCTCCGGCAGCCCCCAGGAAAGGGGCTG  90
V  89.3% (218/244)  IGHV4-38-2*01  49   ...................C...C................G..G...................A................G.........  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  V  Y  H  R  G  D  A  Y  Y  N  P  S  L  K  S  R  V  T  V  S  M  D  T  S  S 
                    Query_8430     91   GAGTGGATTGGGAGTGTCTATCATCGCGGGGACGCGTACTACAATCCGTCCCTCAAGAGTCGAGTCACCGTCTCAATGGACACGTCCAGT  180
V  89.3% (218/244)  IGHV4-38-2*01  139  ...............A........A.T...AG.A.C........C........................A.A...G.A..........AG  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                         N  Q  V  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  T  D  T  D  W  G  G  P 
                    Query_8430     181  AATCAGGTCTCCCTGAGCCTGAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAAGACCGATACTGACTGGGGTGGTCCC  270
V  89.3% (218/244)  IGHV4-38-2*01  229  ..C...T.........AG.....C...............................A........--------------------------  292
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-9*01     15   --------------------------------------------------------------------------.......---------  21

                                        MGT----------------------->                                  
                                         T  G  L  F  W  Y  F  D  L  W  G  R  G  P  L  V  T  V  S  S  
                    Query_8430     271  ACAGGGCTCTTCTGGTACTTCGATCTCTGGGGCCGTGGCCCCCTGGTCACTGTCTCCTCAG  331
J  98.0% (49/50)    IGHJ2*01       4    -----------............................A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_89982

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           308     4e-86
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAG	GC	TATTACTATGGAAGTATTGCTTATTACTAC	GGCAGG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGGCTATTACTATGGAAGTATTGCTTATTACTACGGCAGG	AKGYYYGSIAYYYGR	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	223	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  G  G  F  R  F  R  S  Y  G  L  H  W  V  R  P  A  P  G  K  G  L  
                    Query_8431   1    GGTCCCTGAGACTCTCCTGTGCAGGCGGTGGATTCCGGTTCCGTTCCTATGGCCTGCACTGGGTCCGCCCGGCTCCCGGCAAGGGGCTGG  90
V  89.6% (223/249)  IGHV3-30*18  47   ........................C.TC.......ACC...A..AG.......A...............A......A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  A  V  I  S  S  D  G  S  I  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_8431   91   CGTGGGTGGCAGTAATATCATCTGATGGAAGCATTAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATCCCC  180
V  89.6% (223/249)  IGHV3-30*18  137  A............T.......A.........T.A....................................................T..A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      Q  F  T  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  G  Y  Y  Y  G  S  I  
                    Query_8431   181  AGTTCACGTTGCATTTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTTCTGTGCCAAAGGCTATTACTATGGAAGTATTG  270
V  89.6% (223/249)  IGHV3-30*18  227  ..AA....C..T..C..........................................A......G....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  86.7% (26/30)    IGHD3-22*01  2    -----------------------------------------------------------------------..........AT....G..  20

                                      ---------------->                                  
                                      A  Y  Y  Y  G  R  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_8431   271  CTTATTACTACGGCAGGTGGGGCCAGGGAACCCAAGTCACCGTCTCCTCAG  321
D  86.7% (26/30)    IGHD3-22*01  21   G..........----------------------------------------  31
J  94.1% (32/34)    IGHJ4*02     15   -----------------................TG................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_89983

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         360     1e-101
IGHD1-26*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              62.2    6e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGA	ATAGTGGGAGCTACTA	TTGGGAAGAA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGAATAGTGGGAGCTACTATTGGGAAGAATAC	ARDPNSGSYYWEEY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  P  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8432     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  96.0% (240/250)  IGHV3-30-3*01  47   ...................................A.................................................G....  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  M  S  H  D  G  N  N  K  Y  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8432     91   AGTGGGTGGCAGTCATGTCACATGATGGAAACAATAAATACCACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (240/250)  IGHV3-30-3*01  137  .............T..A...T.........G..........T................................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  T  V  Y  Y  C  A  R  D  P  N  S  G  S  Y  
                    Query_8432     181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGACTGTATATTACTGTGCGAGAGATCCGAATAGTGGGAGCTACT  270
V  96.0% (240/250)  IGHV3-30-3*01  227  .......G.......................................G....G.................--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (16/16)   IGHD1-26*01    4    ---------------------------------------------------------------------------...............  18

                                        ------------->                             
                                        Y  W  E  E  Y  W  G  Q  G  T  L  V  T  V  S
                    Query_8432     271  ATTGGGAAGAATACTGGGGCCAGGGAACCCTGGTCACCGTCTC  313
D  100.0% (16/16)   IGHD1-26*01    19   .------------------------------------------  19
J  100.0% (32/32)   IGHJ4*02       12   -----------................................  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_65168

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            302     3e-84
IGHD1-7*01                                                                                            14.1    8.4  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	GCGGCTT	TAACTCCAACTAC	ATTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATGCGGCTTTAACTCCAACTACATTGTTTGACGAC	AKDAALTPTTLFDD	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	96	18	0	84.2
CDR3-IMGT (germline)	243	251	9	9	0	0	100
Total	N/A	N/A	251	222	29	0	88.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  N  H  A  M  H  W  V  R  Q  F  P  G  K  G  L  
                    Query_8433  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCGACAATCATGCCATGCACTGGGTCCGGCAATTTCCAGGGAAGGGCCTGG  90
V  88.4% (222/251)  IGHV3-9*01  47   ........................................T..TG..T.......................GC.................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  L  S  W  D  S  G  I  T  K  Y  A  D  F  V  R  G  R  F  I  I  S  R  D  N  T  
                    Query_8433  91   AGTGGGTCTCAGGTCTTAGTTGGGATAGTGGAATCACAAAATATGCGGACTTTGTGCGGGGCCGATTCATCATTTCGAGAGACAACACCA  180
V  88.4% (222/251)  IGHV3-9*01  137  ..............A........A.......T.G..T.GGC..........C....AA...........C...C..C.........G...  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                     K  N  S  L  F  L  L  M  T  S  L  R  P  E  D  T  A  F  Y  F  C  A  K  D  A  A  L  T  P  T  
                    Query_8433  181  AGAACTCCCTGTTTTTGCTAATGACCAGTCTGCGACCTGAGGACACGGCCTTCTATTTCTGTGCAAAAGATGCGGCTTTAACTCCAACTA  270
V  88.4% (222/251)  IGHV3-9*01  227  ............A.C...A.....A.......A..G................G....A.............-------------------  297
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  84.6% (11/13)    IGHD1-7*01  5    ------------------------------------------------------------------------------.....GG.....  16

                                     ------------->                                  
                                     T  L  F  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8433  271  CATTGTTTGACGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  84.6% (11/13)    IGHD1-7*01  17   .-----------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02    6    -----......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_89988

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           330     1e-92
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCACCGATCC	TATAACGATGATAGTAGTGGTTA	CC	ACTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCACCGATCCTATAACGATGATAGTAGTGGTTACCACTTGGACTAT	ARVHRSYNDDSSGYHLDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  E  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8434   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGATTATGAAATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-48*03  47   .....................................C......AG...........A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  H  I  S  R  D  G  G  D  I  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_8434   91   AGTGGATTTCACACATTAGTAGGGATGGTGGTGACATTTACTACGCAGACTCTGTGAGGGGCCGCTTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (230/249)  IGHV3-48*03  137  .....G.....T..........TAG....A..AC...A...................A......A.........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      N  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  V  H  R  S  Y  N  D  
                    Query_8434   181  ACAACTCACTGTTTCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCTGTTTATTTCTGTGCGAGAGTCCACCGATCCTATAACGATG  270
V  92.4% (230/249)  IGHV3-48*03  227  .G..........A............C...............................A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.3% (21/23)    IGHD3-22*01  2    --------------------------------------------------------------------------------...T..T...  11

                                      IMGT--------------------->                                  
                                      D  S  S  G  Y  H  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8434   271  ATAGTAGTGGTTACCACTTGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  330
D  91.3% (21/23)    IGHD3-22*01  12   .............-----------------------------------------------  24
J  93.3% (42/45)    IGHJ4*02     4    ---------------....T.....C.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_89989

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           346     2e-97
IGHD6-19*01                                                                                           21.8    0.038
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCG	GTGGCTGGTAC	GG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCGGTGGCTGGTACGGCTAC	ARGGGWYGY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8435   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-48*03  47   ............................................AGT...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  G  G  A  N  I  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  G  
                    Query_8435   91   AGTGGGTTTCATACATTAGTAGTGGTGGTGCTAACATATACTACGCAGATTCTGTGAGGGGCCGTTTCACCATCTCCAGAGACAACGGCA  180
V  94.4% (235/249)  IGHV3-48*03  137  .......................A.....AG..C...............C.......A......A......................C..  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  G  W  Y  G  Y  
                    Query_8435   181  GGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTATTGTGCGCGAGGCGGTGGCTGGTACGGCTACT  270
V  94.4% (235/249)  IGHV3-48*03  227  A.........................................................C......A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-19*01  11   ------------------------------------------------------------------------...........-------  21
J  100.0% (38/38)   IGHJ4*02     11   -------------------------------------------------------------------------------------.....  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8435   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (38/38)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_65169

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           419     2e-119
IGHD2-8*02                                                                                            14.1    9.7   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GTGAGGATTTCTTTGATG	CTGGTGG	GTCCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGAGGATTTCTTTGATGCTGGTGGGTCCCACTACTACGGCTTGGACGTC	ARREDFFDAGGSHYYGLDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  N  F  A  A  F
                    Query_8436   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAACTTTGCCGCCTT  90
V  96.2% (279/290)  IGHV5-51*01  6    .............................................................................G....A..AG..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  E  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_8436   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGAGATCATCTATCCCGGTGACTCTGATACCAGATACAGCCC  180
V  96.2% (279/290)  IGHV5-51*01  96   ..................................................G............T..........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  A  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  R  A  S  D  T  A
                    Query_8436   181  GTCCTTCCAAGGCCAGGTCGCCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACACCGC  270
V  96.2% (279/290)  IGHV5-51*01  186  ...................A....C.................................................A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  N  Y  C  A  R  R  E  D  F  F  D  A  G  G  S  H  Y  Y  G  L  D  V  W  G  Q  G  T  T  V
                    Query_8436   271  CATGAATTACTGTGCGAGACGTGAGGATTTCTTTGATGCTGGTGGGTCCCACTACTACGGCTTGGACGTCTGGGGCCAAGGGACCACGGT  360
V  96.2% (279/290)  IGHV5-51*01  276  ....T...............----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-8*02   12   --------------------------------------.......---------------------------------------------  18
J  94.3% (50/53)    IGHJ6*02     10   --------------------------------------------------..........TA............................  49

                                                   
                                        T  V  S  S 
                    Query_8436   361  CACCGTCTCTTCA  373
J  94.3% (50/53)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_125705

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            304     9e-85
IGHD3-16*01                                                                                           12.2    30   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCCCCCTAAGT	AGTTTTTCTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCCCCTAAGTAGTTTTTCTTATTTTGAGTGC	ARPPLSSFSYFEC	232	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	10	1	0	90.9
CDR1-IMGT	19	42	24	21	3	0	87.5
FR2-IMGT	43	93	51	49	2	0	96.1
CDR2-IMGT	94	117	24	22	2	0	91.7
FR3-IMGT	118	231	114	104	10	0	91.2
CDR3-IMGT (germline)	232	237	6	6	0	0	100
Total	N/A	N/A	230	212	18	0	92.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  S  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  
                    Query_8437   8    GTGCAGTCTCTGGATTCACCTTTAGTTCTTATTGGATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAA  97
V  92.2% (212/230)  IGHV3-7*01   65   ......C...................AGC..........GC.................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  Q  D  G  S  Q  K  K  S  V  D  S  L  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_8437   98   ACCAAGATGGAAGTCAGAAAAAATCTGTGGACTCTCTGAAGGGCCGATTCACCATTTCCAGAGACAACGCCAAGAACTCACTGTATCTGC  187
V  92.2% (212/230)  IGHV3-7*01   155  .G............G.....T.C.A..........G...................C..................................  244
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><--------------CDR3-IMGT-------------->       
                                      Q  M  D  S  L  T  T  K  D  T  A  V  Y  Y  C  A  R  P  P  L  S  S  F  S  Y  F  E  C  W  G  
                    Query_8437   188  AAATGGACAGCCTGACAACCAAAGACACGGCTGTGTATTACTGTGCGAGACCCCCCCTAAGTAGTTTTTCTTATTTTGAGTGCTGGGGCC  277
V  92.2% (212/230)  IGHV3-7*01   245  .....A.........G.G..G.G...........................----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  83.3% (10/12)    IGHD3-16*01  23   --------------------------------------------------------------....A.G.....----------------  34
J  95.3% (41/43)    IGHJ4*02     6    --------------------------------------------------------------------------.....C.A........  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_8437   278  AGGGAACCCTGGTCACCGTCTCCTCAG  304
J  95.3% (41/43)    IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_93574

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           12.2    33   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	44	6	0	88
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	47	4	0	92.2
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	100	14	0	87.7
CDR3-IMGT (germline)	261	268	8	7	1	0	87.5
Total	N/A	N/A	268	236	32	0	88.1


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  
                    Query_8438   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACTTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCC  90
V  88.1% (236/268)  IGHV4-34*01  26   ........T.......T....................C........CTA..G..G......C.................C...A.C....  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  
                    Query_8438   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCA  180
V  88.1% (236/268)  IGHV4-34*01  116  ................G......................A............CA.C.AC......C..T......A..............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      M  S  V  D  T  S  K  K  Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_8438   181  TGTCAGTAGACACGTCCAAGAAACAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGG  270
V  88.1% (236/268)  IGHV4-34*01  206  .A....................C..GT...........C..A......T.....................G.....C......A....--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------------------.  13

                                      -------CDR3-IMGT--------------->                                  
                                      G  W  R  R  Q  R  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8438   271  GCTGGCGAAGACAGCGCAACTGGTTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  336
D  100.0% (6/6)     IGHD6-19*01  14   .....-------------------------------------------------------------  18
J  98.0% (49/50)    IGHJ5*02     2    ----------------..............................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_327222

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           383     1e-108
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*01                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGC	TAGTAGTGTTTATTAC	AGAGATGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGCTAGTAGTGTTTATTACAGAGATGGCTTTGACTAC	ARGASSVYYRDGFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	287	266	21	0	92.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  T  S  V  K  V  S  C  K  A  S  G  Y  T  F  D  A  Y 
                    Query_8439   2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGACCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTGATGCCTAT  91
V  92.7% (266/287)  IGHV1-18*01  7    ...................C...................G.........................................ACCAG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  R  Q  G  L  E  W  V  G  W  I  N  T  Y  T  G  D  T  N  Y  A  Q 
                    Query_8439   92   GGTATCAACTGGGTGCGACAGGCCCCTCGACAAGGACTTGAGTGGGTGGGTTGGATCAACACTTACACTGGTGACACAAACTATGCACAG  181
V  92.7% (266/287)  IGHV1-18*01  97   .......G...................G.......G.........A....A.......G.G......A....A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  R  L  R  Y  D  D  T  A 
                    Query_8439   182  AATCTCCAGGGCAGAGTCACCATGACCACTGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGACTGAGATATGACGACACGGCC  271
V  92.7% (266/287)  IGHV1-18*01  187  ..G..........................A......................................C.......C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  G  A  S  S  V  Y  Y  R  D  G  F  D  Y  W  G  H  G  T  L  V  T  V  S  S 
                    Query_8439   272  GTGTATTACTGTGCCAGGGGGGCTAGTAGTGTTTATTACAGAGATGGCTTTGACTACTGGGGCCACGGAACCCTGGTCACCGTCTCCTCA  361
V  92.7% (266/287)  IGHV1-18*01  277  ..............G..-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  93.8% (15/16)    IGHD3-22*01  13   -----------------------........G.......---------------------------------------------------  28
J  97.7% (43/44)    IGHJ4*01     5    -----------------------------------------------..................A........................  47

                                       
                                       
                    Query_8439   362  G  362
J  97.7% (43/44)    IGHJ4*01     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_338939

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           364     5e-103
IGHD2-15*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACTGGC	ATATTGTAGTGGT	ATGAGTTGCACCTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACTGGCATATTGTAGTGGTATGAGTTGCACCTCTTACTACTACGCTATGGACGTC	ARVLAYCSGMSCTSYYYAMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8440   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-33*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  N  N  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8440   91   AGTGGGTGGCTGTTATATGGTATGATGGAAATAATAAATACTATGGAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAACTCCA  180
V  96.8% (241/249)  IGHV3-33*01  137  ..........A...................G..............C..................A....................T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  L  A  Y  C  S  G  
                    Query_8440   181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGTACTGGCATATTGTAGTGGTA  270
V  96.8% (241/249)  IGHV3-33*01  227  ..............C.....................................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD2-15*01  4    ----------------------------------------------------------------------------.............-  16

                                      DR3-IMGT-------------------------->                                 
                                      M  S  C  T  S  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8440   271  TGAGTTGCACCTCTTACTACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  338
J  98.1% (53/54)    IGHJ6*02     9    --------------..........G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_338938

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           357     1e-100
IGHD3-22*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGCCCACCGATTAATCTTC	GATAGAAGTGGTTATTACT	TGCGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGCCCACCGATTAATCTTCGATAGAAGTGGTTATTACTTGCGCGAC	ASAHRLIFDRSGYYLRD	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8441   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGCAAGGGC  90
V  96.0% (238/248)  IGHV4-31*03  49   ...................................................................................G......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  F  I  S  G  D  T  S 
                    Query_8441   91   CTGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCGACTACAACCCGTCCCTCAAGAGTCGAGTTTTCATATCAGGAGACACGTCT  180
V  96.0% (238/248)  IGHV4-31*03  139  ...............T.......................T.............................AC........T..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  S  A  H  R  L  I  F  D 
                    Query_8441   181  AAGAACCAGTTCTCCCTCAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCATTTATTACTGTGCGAGCGCCCACCGATTAATCTTCGAT  270
V  96.0% (238/248)  IGHV4-31*03  229  .................G.A...............................G.G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  94.7% (18/19)    IGHD3-22*01  11   ---------------------------------------------------------------------------------------...  13

                                      MGT-------------------->                                  
                                       R  S  G  Y  Y  L  R  D  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_8441   271  AGAAGTGGTTATTACTTGCGCGACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  328
D  94.7% (18/19)    IGHD3-22*01  14   ..T.............------------------------------------------  29
J  97.2% (35/36)    IGHJ4*02     13   ----------------------..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_67752

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           324     8e-91
IGHD6-19*01                                                                                           18.0    0.60 
IGHJ2*01                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAA	CAGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAACAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQQWLPGDWYFDL	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  R  N  Y  W  S  W  I  R  Q  P  P  G  E  R  L  E 
                    Query_8442   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCACTAGAAACTACTGGAGCTGGATCCGGCAGCCCCCAGGTGAGAGACTGGAG  90
V  92.6% (225/243)  IGHV4-59*08  49   ...................C...........G........G...TT...............................GA..G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_8442   91   TGGATTGCATATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  92.6% (225/243)  IGHV4-59*08  139  .......GG......T...........AG...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  F  L  P  A  V  Q  Q  W  L 
                    Query_8442   181  CAGTTCTCCCTGAAGATGACTTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGATTCCTCCCCGCGGTGCAACAGTGGCTG  270
V  92.6% (225/243)  IGHV4-59*08  229  ...............C...GC........................G.................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-19*01  9    ---------------------------------------------------------------------------------.........  17

                                      ----------------------->                                  
                                       P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8442   271  CCAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  328
J  100.0% (51/51)   IGHJ2*01     3    -------...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_338931

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           388     5e-110
IGHD7-27*01                                                                                           14.1    9.4   
IGHJ2*01                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD7-27*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	CTGGGGA	ACCTGGGCGTCTTT	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTGGGGAACCTGGGCGTCTTTCTTCGATCTC	RETGEPGRLSSIS	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	75	69	5	1	92
CDR1-IMGT	77	100	24	18	6	0	75
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	110	4	0	96.5
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	296	274	21	1	92.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q   L  E  L  R  *  R  S  L  G  P  Q  *  R  C  H  A  R  R  L  V  I  A  L  C
                    Query_8443   3    CAGATGCAGCTGGTGCAGT-TGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTGTCATGCAAGGCGTCTGGTTATAGCTTTATG  91
V  92.6% (274/296)  IGHV1-18*01  1    ...G.T.............C.......................................C..C........T........C.C.....CC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                        T  M  V  L  A  G  C  D  R  P  L  E  K  G  F  S  G  W  D  G  S  E  L  T  M  V  T  Q  T  M
                    Query_8443   92   CACTATGGTATTAGCTGGGTGCGACAGGCCCCTGGAGAAGGGCTTCAGTGGATGGGATGGATCAGAGCTGACAATGGTGACACAAACTAT  181
V  92.6% (274/296)  IGHV1-18*01  91   AG.........C........................C........G...................C...T........A...........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                        H  R  S  S  R  A  E  S  P  *  P  E  T  H  Q  R  A  Q  P  T  W  S  *  G  A  *  D  L  T  T
                    Query_8443   182  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGAGACACATCAACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  271
V  92.6% (274/296)  IGHV1-18*01  181  .........C........................C.........C.............................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                        R  P  F  I  T  V  R  E  T  G  E  P  G  R  L  S  S  I  S  G  A  V  A  P  W  S  L  S  P  Q
                    Query_8443   272  ACGGCCGTTTATTACTGTGCGAGAGACTGGGGAACCTGGGCGTCTTTCTTCGATCTCTGGGGCCGTGGCTCCCTGGTCACTGTCTCCTCA  361
V  92.6% (274/296)  IGHV1-18*01  271  ........G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD7-27*01  5    --------------------------.......---------------------------------------------------------  11
J  97.7% (43/44)    IGHJ2*01     10   -----------------------------------------------......................A....................  52

                                       
                                       
                    Query_8443   362  G  362
J  97.7% (43/44)    IGHJ2*01     53   .  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_338933

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           371     6e-105
IGHD3-3*01                                                                                            44.9    5e-09 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCCCG	ACGATTTTTGGAGTGGTTATTAT	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCCCGACGATTTTTGGAGTGGTTATTATCTTGACTAC	ARGPDDFWSGYYLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	242	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  E  F  T  F  S  L  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8444   1    GGTCCCTGAGACTCTCCTGTGCAGCTTCTGAATTCACCTTCAGTCTCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.0% (242/247)  IGHV3-33*01  47   .........................G....G.............AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8444   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  98.0% (242/247)  IGHV3-33*01  137  ..........................................................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  P  D  D  F  W  S  
                    Query_8444   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGGGGCCCCGACGATTTTTGGAGTG  270
V  98.0% (242/247)  IGHV3-33*01  227  ....................................C..............................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (23/23)   IGHD3-3*01   6    ---------------------------------------------------------------------------...............  20

                                      ---------------->                                  
                                      G  Y  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8444   271  GTTATTATCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (23/23)   IGHD3-3*01   21   ........-------------------------------------------  28
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_338932

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACCCGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACCCGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNPYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  L  R  Q  A  P  G  K  G  P  
                    Query_8445   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGCTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...G........................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_8445   91   AGTGGGTCTCAGCGATTACTGGGAGTGGTAGTAGCACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  .............T....G...T......G..............G......................................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  P  Y  S  S  G  
                    Query_8445   181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATAACCCGTATTCCAGTGGTT  270
V  93.6% (234/250)  IGHV3-23*01  227  ...............................G....................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8445   271  ATTCACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_338934

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           315     6e-88
IGHD3-16*01                                                                                           18.0    0.65 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACAACG	TATGCTTAT	GTCAGTGCTTGGGGATGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAACGTATGCTTATGTCAGTGCTTGGGGATGGTGCTTTTGATGTC	ARRQRMLMSVLGDGAFDV	267	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	23	7	0	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	16	5	0	76.2
FR3-IMGT	153	266	114	97	17	0	85.1
CDR3-IMGT (germline)	267	273	7	7	0	0	100
Total	N/A	N/A	273	237	36	0	86.8


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  A  S  V  T  T  T  R  Y  S  W  G  W  
                    Query_8446   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCGTCACCACTACTAGATACTCCTGGGGTTGGA  90
V  86.8% (237/273)  IGHV4-39*01  26   ................T.....................................G....A...G..G..G...T....A......C....  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  Q  M  F  Y  G  G  S  T  Y  Q  N  P  S  L  N  S  R  
                    Query_8446   91   TCCGCCAGCCCCCAGGGAAGGGACTGGAATGGATTGGGCAGATGTTCTATGGTGGGAGCACGTACCAGAACCCGTCGCTGAATAGTCGAG  180
V  86.8% (237/273)  IGHV4-39*01  116  ......................G.....G.........AGT..C.AT...A..........C...T.C........C..C..G.......  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  V  S  V  D  P  S  K  S  Q  F  F  L  N  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  
                    Query_8446   181  TCACCGTGTCCGTTGACCCGTCCAAGAGTCAGTTCTTCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCTGTATATTATTGTGCGA  270
V  86.8% (237/273)  IGHV4-39*01  206  .....A.A.....A...A.........AC.......C......G....G...................A.......G.....C.......  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      -------------------CDR3-IMGT--------------------->                                  
                                      R  R  Q  R  M  L  M  S  V  L  G  D  G  A  F  D  V  W  G  Q  G  T  G  V  T  V  S  S  
                    Query_8446   271  GACGACAACGTATGCTTATGTCAGTGCTTGGGGATGGTGCTTTTGATGTCTGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  354
V  86.8% (237/273)  IGHV4-39*01  296  ...---------------------------------------------------------------------------------  298
                                      R                                                                                   
D  100.0% (9/9)     IGHD3-16*01  26   ----------.........-----------------------------------------------------------------  34
J  95.7% (45/47)    IGHJ3*01     4    -------------------------------------............................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_338936

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           338     5e-95
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGATGGA	ATTACTAT	CAAACGAAGCA	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCGATGGAATTACTATCAAACGAAGCAATGGTTTTGATATA	TRGDGITIKRSNGFDI	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_8447   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGGCTTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  93.9% (231/246)  IGHV3-53*01  47   ................................................A.......AGC......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_8447   91   AGTGGGTCTCAGTTATTTACAGCGGTGGTACCACATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.9% (231/246)  IGHV3-53*01  137  ...................T..........G........A..................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      S  T  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  L  Y  Y  C  T  R  G  D  G  I  T  I  K  R  
                    Query_8447   181  GCACGTTGTATCTTCAAATGCACAGCCTGAGAGCCGACGACACGGCCCTGTACTACTGTACGAGAGGCGATGGAATTACTATCAAACGAA  270
V  93.9% (231/246)  IGHV3-53*01  227  A....C..............A................G.........G....T......G......------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  3    --------------------------------------------------------------------------........--------  10

                                      ---------------->                                  
                                      S  N  G  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8447   271  GCAATGGTTTTGATATATGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  321
J  93.8% (45/48)    IGHJ3*02     3    ---...C.........C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_161979

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           333     1e-93
IGHD5-18*01                                                                                           27.6    8e-04
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCTACCGGAA	GTGGATACAACTATGGT	AAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCTACCGGAAGTGGATACAACTATGGTAATAACTGGTTCGACCCG	ARDPTGSGYNYGNNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  A  S  V  S  H  Y  Y  W  S  W  V  R  Q  S  P  G  K  G  L  E 
                    Query_8448   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGCCTCCGTCAGTCATTACTACTGGAGCTGGGTCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  93.5% (229/245)  IGHV4-59*02  49   ...................C...........G..........AG................A........C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  G  G  I  T  N  Y  N  P  S  L  K  S  R  V  T  T  S  I  D  T  S  K  N 
                    Query_8448   91   TGGATTGGATATATCTATTACGGGGGGATCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCACATCAATAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*02  139  ........G............A.T....G......................................T....G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  Y 
                    Query_8448   181  CAGTTCTCCCTGAGGCTGAGCTCTCTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGACCCTACCGGAAGTGGATACAACTAT  270
V  93.5% (229/245)  IGHV4-59*02  229  .............A..........G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD5-18*01  1    ----------------------------------------------------------------------------.........G....  14

                                      -------------------->                                  
                                       G  N  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8448   271  GGTAATAACTGGTTCGACCCGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  94.1% (16/17)    IGHD5-18*01  15   ...----------------------------------------------------  17
J  98.0% (48/49)    IGHJ5*02     3    ------..............C..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_161978

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD3-16*01                                                                                           43.0    2e-08 
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCTAGTCTGGAA	TATGATTACGTTTGGGGGAGTT	CTCACCTCAC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCTAGTCTGGAATATGATTACGTTTGGGGGAGTTCTCACCTCACCTGGTTCGACCCC	AREASLEYDYVWGSSHLTWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  S  I  S  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8449   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCTCCATCAGTAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ...................C.........................T............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  T  G  S  T  K  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8449   91   TGGATTGGGTATATGTATTACACTGGGAGCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAT  180
V  96.3% (236/245)  IGHV4-59*01  139  ..............C.......G............C................A....................................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  E  A  S  L  E  Y  D  Y  V 
                    Query_8449   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGAGCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAAGCTAGTCTGGAATATGATTACGTT  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............C............C....................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (22/22)   IGHD3-16*01  5    ------------------------------------------------------------------------------............  16

                                      -IMGT--------------------------->                                  
                                       W  G  S  S  H  L  T  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8449   271  TGGGGGAGTTCTCACCTCACCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  337
D  100.0% (22/22)   IGHD3-16*01  17   ..........---------------------------------------------------------  26
J  100.0% (47/47)   IGHJ5*02     5    --------------------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_16679

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            358     3e-101
IGHD3-10*01                                                                                           10.3    115   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GA	TCGGG	ATGGCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGATCGGGATGGCTCCCTGACTAC	VGGSGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  N  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8450   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGTAACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-7*01   47   ....................................C........G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  K  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8450   91   AGTGGGTGGCCAACATAAAGAAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (239/249)  IGHV3-7*01   137  ....................C.................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  V  G  G  S  G  W  L  P  D  
                    Query_8450   181  AGAACTCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGTGGGAGGATCGGGATGGCTCCCTGACT  270
V  96.0% (239/249)  IGHV3-7*01   227  ...................A...A............C..........................C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   -----------------------------------------------------------------------.....--------------  18
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_8450   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   .............................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_161971

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           339     1e-95
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	N/A	N/A	GGGGCCTGTG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGCCTGTGTACTTTGACCAC	AKGPVYFDH	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8451   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-23*01  47   ....................G....................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  I  G  G  G  D  I  T  Y  Y  A  D  S  V  N  G  R  F  T  I  S  R  D  N  S  
                    Query_8451   91   AGTGGGTCTCAAGTATTATTGGTGGTGGTGATATCACATACTATGCAGACTCCGTCAACGGCCGGTTCACCATCTCCAGAGACAATTCGA  180
V  93.9% (232/247)  IGHV3-23*01  137  ...........GC.....G....A......G..G.........C...........G..G.............................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  T  L  Y  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  P  V  Y  F  D  H  
                    Query_8451   181  AGAATACGCTTTATCTGCAAATGAACGGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGGGGCCTGTGTACTTTGACCACT  270
V  93.9% (232/247)  IGHV3-23*01  227  ....C.....G...............A........................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  91.3% (42/46)    IGHJ4*02     3    -----------------------------------------------------------------------------.........T...  15

                                                                       
                                      W  G  Q  G  R  L  V  T  V  S  S  
                    Query_8451   271  GGGGCCAGGGAAGGTTGGTCACCGTCTCCTCAG  303
J  91.3% (42/46)    IGHJ4*02     16   ............CCC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_258963

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     3e-91
IGHD4-17*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTGCGC	TGACTAAGGTG	GGCTGGAGATTCG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGCGCTGACTAAGGTGGGCTGGAGATTCGGGTTCTTCGATCTC	ATALTKVGWRFGFFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  R  L  
                    Query_8452   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTTAGCAACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGAGGCTGG  90
V  92.3% (227/246)  IGHV3-23*01  47   ........................C....................G...........G.........................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  A  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  S  
                    Query_8452   91   AGTGGGTCTCAAGTATCAGTGCCAGTGGTGGTAGTACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACACATCCA  180
V  92.3% (227/246)  IGHV3-23*01  137  ...........GC...T....GT...........C.................................................AT....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  Y  T  L  Y  L  E  M  N  S  L  R  V  A  D  T  A  V  Y  Y  C  A  T  A  L  T  K  V  G  W  
                    Query_8452   181  AGTACACACTGTATCTAGAAATGAACAGCCTGAGAGTCGCGGACACGGCCGTCTATTACTGTGCGACTGCGCTGACTAAGGTGGGCTGGA  270
V  92.3% (227/246)  IGHV3-23*01  227  ..A....G........GC..................C..A............A.............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.9% (10/11)    IGHD4-17*01  1    ------------------------------------------------------------------------......C....-------  11

                                      T------------------>                                  
                                      R  F  G  F  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8452   271  GATTCGGGTTCTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
J  97.9% (47/48)    IGHJ2*01     6    ------...A............................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_16670

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           441     6e-126
IGHD3-10*01                                                                                           18.0    0.67  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGCCC	GTTCGGGGA	CTTTCCCAAAAAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGCCCGTTCGGGGACTTTCCCAAAAAAACTTTGACTAC	ARDLPVRGLSQKNFDY	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	10	78	69	69	0	0	100
CDR1-IMGT	79	102	24	24	0	0	100
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	111	3	0	97.4
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	290	286	4	0	98.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_8453   10   CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTAT  99
V  98.6% (286/290)  IGHV1-18*01  7    ..........................................................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_8453   100  GGTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAG  189
V  98.6% (286/290)  IGHV1-18*01  97   ...A......................................................................................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  A  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_8453   190  AAACTCCAGGGCAGAGTCACCATGACCACAGACACTTCCGCGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  279
V  98.6% (286/290)  IGHV1-18*01  187  ..G................................A...A..................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  D  L  P  V  R  G  L  S  Q  K  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_8453   280  GTGTATTACTGTGCGAGAGATCTGCCCGTTCGGGGACTTTCCCAAAAAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  369
V  98.6% (286/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD3-10*01  12   ---------------------------.........------------------------------------------------------  20
J  100.0% (45/45)   IGHJ4*02     4    -------------------------------------------------.........................................  44

                                          
                                       S  
                    Query_8453   370  TCAG  373
J  100.0% (45/45)   IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_16671

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           316     2e-88
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGTTGGGCAA	CAGTGGCTGGTAC	GGAGT	CTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGTTGGGCAACAGTGGCTGGTACGGAGTCTTTAACTTC	ARDGLGNSGWYGVFNF	239	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	49	2	0	96.1
CDR2-IMGT	101	124	24	22	2	0	91.7
FR3-IMGT	125	238	114	106	8	0	93
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	232	217	15	0	93.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  F  N  M  H  W  V  R  Q  P  P  G  K  G  L  E  W  L  A  V  I  
                    Query_8454   15   GTGCAGCCTCTGGATTCACCTTCAGTAGCTTTAATATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGGAGTGGTTGGCAGTTATAT  104
V  93.5% (217/232)  IGHV3-30*04  65   ..............................A.GC...................G.......................G............  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  Y  D  G  S  N  G  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  G  T  L  Y  L  
                    Query_8454   105  CATATGATGGAAGTAATGGACACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGGGCACCCTGTATCTGG  194
V  93.5% (217/232)  IGHV3-30*04  155  .................AA.T.....................................................AA...G.........C  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      E  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  R  D  G  L  G  N  S  G  W  Y  G  V  F  N  
                    Query_8454   195  AAATGAACAGTCTGAGAGTTGAGGACACGGCTGTGTATTTCTGTGCGAGAGATGGGTTGGGCAACAGTGGCTGGTACGGAGTCTTTAACT  284
V  93.5% (217/232)  IGHV3-30*04  245  ..........C.......C....................A............--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (13/13)   IGHD6-19*01  9    ----------------------------------------------------------------.............-------------  21
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------....G...  12

                                      ->                                  
                                      F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8454   285  TCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  320
J  95.5% (42/44)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_16676

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           297     8e-83
IGHD6-19*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGGGA	AGGCTCTTGCCGGCTC	TGGCTGGTAC	AAGGAGGGCAT	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAGGCTCTTGCCGGCTCTGGCTGGTACAAGGAGGGCATTTACTACTCCTACTACGGTATCGACGTC	GKALAGSGWYKEGIYYSYYGIDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	218	28	0	88.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8455   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCACCTATGCCCTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  88.6% (218/246)  IGHV3-30*04  47   ...........................................T.G......TA....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  V  S  F  N  G  N  G  Q  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  D  S  
                    Query_8455   91   AGTGGGTGGCACTTGTTTCGTTTAATGGAAATGGTCAATACTACGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACGATTCCA  180
V  88.6% (218/246)  IGHV3-30*04  137  ...........G..A.A..A.A.G......G.AA.A...................................A...........A......  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  T  T  I  Y  L  E  M  N  D  L  R  D  N  D  T  A  V  Y  F  C  G  K  A  L  A  G  S  G  W  
                    Query_8455   181  AGACCACAATTTATCTGGAAATGAACGACCTGAGAGATAACGACACGGCTGTGTATTTCTGTGGGAAGGCTCTTGCCGGCTCTGGCTGGT  270
V  88.6% (218/246)  IGHV3-30*04  227  ...A...GC.G......C........AG........C.G.G................A.....C..------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD6-19*01  12   ----------------------------------------------------------------------------------........  19

                                      --CDR3-IMGT----------------------------->                                 
                                      Y  K  E  G  I  Y  Y  S  Y  Y  G  I  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8455   271  ACAAGGAGGGCATTTACTACTCCTACTACGGTATCGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
D  100.0% (10/10)   IGHD6-19*01  20   ..------------------------------------------------------------------------  21
J  96.7% (59/61)    IGHJ6*02     2    -------------........A............G.......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_161974

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           321     7e-90
IGHD3-3*01                                                                                            18.0    0.58 
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGAA	TTGGAGTGG	GGGCTGTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGAGGGAATTGGAGTGGGGGCTGTTTACTACGGTATGGACGTC	TREGIGVGAVYYGMDV	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	20	6	0	76.9
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	126	24	20	4	0	83.3
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	248	8	7	1	0	87.5
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  E  A  S  G  F  T  F  G  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_8456   2    CCCTGTCCCTCACCTGCGAAGCCTCTGGATTCACTTTCGGTTCCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  91.5% (226/247)  IGHV3-21*01  50   .....AGA...T....T.C...............C...A..AG...............................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  I  S  S  I  T  S  S  S  S  Y  M  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  
                    Query_8456   92   GGATCTCATCCATTACTAGTAGTAGTTCTTACATGTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGG  181
V  91.5% (226/247)  IGHV3-21*01  140  ..G............G..........AG......A......................................................A  229
                                      W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      D  S  V  H  L  H  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  E  G  I  G  V  G  A  V  
                    Query_8456   182  ACTCAGTACATCTGCATATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTACGAGAGAGGGAATTGGAGTGGGGGCTGTTT  271
V  91.5% (226/247)  IGHV3-21*01  230  .....C.GT.......A..........................................G.......-----------------------  296
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (9/9)     IGHD3-3*01   13   ------------------------------------------------------------------------.........---------  21
J  100.0% (48/48)   IGHJ6*02     12   -----------------------------------------------------------------------------------------.  12

                                      ---------------->                              
                                      Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_8456   272  ACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  318
J  100.0% (48/48)   IGHJ6*02     13   ...............................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_161977

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	GGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARQGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_8457   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.5% (278/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_8457   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  W  D  T  A
                    Query_8457   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTGGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  .......C.....................................C...........G......A...............C.........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  Q  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_8457   271  CATATATTACTGTGCGAGACAGGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_8457   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_161976

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         319     2e-89
IGHD2-2*01                                                                                            35.3    4e-06
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGGGGAG	TATTGTAGTAGTACCAACTGC	ATG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGGGGAGTATTGTAGTAGTACCAACTGCATGTACGGTCTGGACGTC	ARGGEYCSSTNCMYGLDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  D  I  Y  S  W  N  W  I  R  Q  P  P  G  M  G 
                    Query_8458     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCTCCAGTGATATTTACTCCTGGAACTGGATCCGGCAGCCGCCAGGGATGGGC  90
V  91.1% (226/248)  IGHV4-30-2*01  49   .......................................AG.....G.GG...........G...............A.......A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  V  G  H  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  R  S 
                    Query_8458     91   CTGGAGTGGGTTGGCCACATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCCAGAGTCGAGTCACCATCTCAGTTGACAGGTCC  180
V  91.1% (226/248)  IGHV4-30-2*01  139  .........A....GT..................G......................A................A.....A.........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  K  H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  E  Y  C  S  S 
                    Query_8458     181  AAGAAACACTTCTCGTTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGGGGGGGGGAGTATTGTAGTAGT  270
V  91.1% (226/248)  IGHV4-30-2*01  229  .....C..G.....CC...A.....G...........................G..............----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  95.2% (20/21)    IGHD2-2*01     5    ------------------------------------------------------------------------------............  16

                                        -IMGT--------------------->                                 
                                         T  N  C  M  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8458     271  ACCAACTGCATGTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
D  95.2% (20/21)    IGHD2-2*01     17   ....G....---------------------------------------------------  25
J  97.9% (47/48)    IGHJ6*02       15   ------------......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_343915

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            339     2e-95
IGHD4-4*01                                                                                            16.1    2.2  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD4-4*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	N/A	GACTACAG	AAAAGTATT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGACTACAGAAAAGTATTTACGGCATGGGCGTC	AKGLQKSIYGMGV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  F  A  M  H  W  A  R  Q  T  P  G  K  A  L  
                    Query_8459  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTTTGCCATGCACTGGGCCCGGCAAACTCCAGGGAAGGCCCTGG  90
V  93.6% (233/249)  IGHV3-9*01  47   ................................................A..............T.......G............G.....  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  S  I  S  Y  N  S  D  N  I  V  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_8459  91   AGTGGGTCTCAAGTATTAGTTACAATAGTGATAATATAGTCTATGCCGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAGCGCCA  180
V  93.6% (233/249)  IGHV3-9*01  137  ...........G.........GG.......G..GC....G......G.....................................A.....  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                     K  N  S  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  F  Y  Y  C  A  K  G  L  Q  K  S  I  Y  
                    Query_8459  181  AGAACTCCCTGTATTTGCAAATGAGCAGTCTGAGAGCTGAGGACACGGCCTTTTATTACTGTGCAAAAGGACTACAGAAAAGTATTTACG  270
V  93.6% (233/249)  IGHV3-9*01  227  ..............C.........A...........................G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD4-4*01  2    ---------------------------------------------------------------------........-------------  9
J  93.8% (45/48)    IGHJ6*02    15   --------------------------------------------------------------------------------------....  18

                                     ---------->                                 
                                     G  M  G  V  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_8459  271  GCATGGGCGTCTGGGGCCAAGGGACCGCGGTCACCGTCTCCTCA  314
J  93.8% (45/48)    IGHJ6*02    19   .T....A...................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_343914

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           338     5e-95
IGHD1-26*01                                                                                           12.2    32   
IGHJ6*02                                                                                              102     4e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAAA	AAC	AGTGGAAGC	C	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAAACAGTGGAAGCCACTATTATTACTACGGTATGGACGTC	VKNSGSHYYYYGMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8460   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACTTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.5% (232/248)  IGHV3-30*18  47   .........................C...........C.......G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  D  N  K  Y  Y  L  D  S  V  T  G  R  F  T  I  S  R  D  N  S  
                    Query_8460   91   AGTGGGTGGCGGTCATATCATATGATGGAGATAATAAATACTATTTAGACTCCGTGACGGGCCGATTCACCATCTCCCGGGACAATTCCA  180
V  93.5% (232/248)  IGHV3-30*18  137  ..........A..T...............AG.............GC...........A...................A.A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  V  K  N  S  G  S  H  Y  Y  
                    Query_8460   181  AGAACACCCTGTATCTGCAAATGAACAGCCTGAGAGTTGAGGACACGGCTGTTTATTACTGTGTGAAAAACAGTGGAAGCCACTATTATT  270
V  93.5% (232/248)  IGHV3-30*18  227  .......G............................C...............G..........C....----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.9% (8/9)      IGHD1-26*01  6    -----------------------------------------------------------------------.....G...----------  14
J  96.6% (57/59)    IGHJ6*02     4    ---------------------------------------------------------------------------------....C..C.  12

                                      ---------------->                                 
                                      Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8460   271  ACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  96.6% (57/59)    IGHJ6*02     13   ..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_77860

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD6-6*01                                                                                            16.1    2.2  
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-6*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCCGATTCG	GCTCGTCC	GGGGACCTTTATCCCTAT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCCGATTCGGCTCGTCCGGGGACCTTTATCCCTATTTCGACCCC	ARDLRFGSSGDLYPYFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  A  T  Y  F  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_8461   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTGTCCATCGCTACTTACTTCTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   ...............................GC......AG..G.....A...................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  S  I  Y  Y  T  G  I  T  K  Y  N  P  S  L  K  S  R  V  T  I  L  L  D  T  S  K  S 
                    Query_8461   91   TGGATTGCGTCTATCTATTACACTGGGATCACCAAGTATAACCCCTCCCTCAAGAGTCGAGTCACCATATTACTAGACACGTCCAAGAGC  180
V  92.2% (226/245)  IGHV4-59*01  139  .......G..A...........G.....G......C..C...............................C.G...............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  E  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  R  F  G  S  S  G  D 
                    Query_8461   181  CAGTTCTCCCTGGAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATCTCCGATTCGGCTCGTCCGGGGAC  270
V  92.2% (226/245)  IGHV4-59*01  229  ............A......G...........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-6*01   11   ----------------------------------------------------------------------------........------  18

                                      -------------------->                                  
                                       L  Y  P  Y  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_8461   271  CTTTATCCCTATTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  325
J  97.7% (42/43)    IGHJ5*02     9    ------------.........................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_343916

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           410     1e-116
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAGGG	AGTAGTGGTTATT	TTAGCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAGGGAGTAGTGGTTATTTTAGCCTC	ARRGSSGYFSL	292	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	17	7	0	70.8
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	111	3	0	97.4
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	294	278	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  K  G  S  D  F  S  F  A  
                    Query_8462   5    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGATTTCAGTTTTGCCA  94
V  94.6% (278/294)  IGHV5-51*01  2    ..G...........................................G............................GA.A...C...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      R  N  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  H  D  S  D  T  R  Y  
                    Query_8462   95   GGAACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTAGAGTGGATGGGGAACATCTATCCTCATGACTCTGATACCAGATACA  184
V  94.6% (278/294)  IGHV5-51*01  92   .CT........................................G.............T..........GG....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  T  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_8462   185  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  94.6% (278/294)  IGHV5-51*01  182  .......................................A.................A................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------CDR3-IMGT----------->                                  
                                      T  A  M  Y  Y  C  A  R  R  G  S  S  G  Y  F  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8462   275  CCGCCATGTATTATTGTGCGAGACGAGGGAGTAGTGGTTATTTTAGCCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  94.6% (278/294)  IGHV5-51*01  272  .............C..........------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                              
D  100.0% (13/13)   IGHD3-22*01  14   -----------------------------.............------------------------------------------  26
J  100.0% (35/35)   IGHJ4*02     14   -------------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_343911

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD3-16*01                                                                                           10.3    124   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGACGAGGGGCA	GGGGG	CGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGACGAGGGGCAGGGGGCGGTTGACTCT	ARVDEGQGAVDS	261	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	20	4	0	83.3
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	16	5	0	76.2
FR3-IMGT	147	260	114	108	6	0	94.7
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	247	20	0	92.5


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  K  V  S  G  G  S  I  T  T  Y  Y  W  S  W  I  R  
                    Query_8463   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCAAGGTCTCTGGGGGCTCCATCACGACTTACTACTGGAGTTGGATCCGAC  90
V  92.5% (247/267)  IGHV4-59*01  26   ................T.........................CT........T..........GT.G............C........G.  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  T  G  S  V  N  R  N  P  S  L  K  S  R  V  T  
                    Query_8463   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACACTGGCAGTGTCAACCGCAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  92.5% (247/267)  IGHV4-59*01  116  .............................................G...G..CAC....TA.............................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      M  S  V  D  T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  
                    Query_8463   181  TGTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTTG  270
V  92.5% (247/267)  IGHV4-59*01  206  .A....................................C...G...........................G................---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      ----CDR3-IMGT------------>                                  
                                      D  E  G  Q  G  A  V  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8463   271  ACGAGGGGCAGGGGGCGGTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  330
D  100.0% (5/5)     IGHD3-16*01  18   ----------.....---------------------------------------------  22
J  92.9% (39/42)    IGHJ4*02     7    ------------------......AC.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_77867

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           352     3e-99
IGHD6-19*01                                                                                           12.2    33   
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTAAAGACCCCGGAGGGC	GGCTGG	C	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTAAAGACCCCGGAGGGCGGCTGGCACTACTACTACGGCTTGGACGTC	ARVKTPEGGWHYYYGLDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	236	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8464   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTGACTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.5% (236/247)  IGHV3-21*01  47   ....................................C.......AG.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8464   91   AGTGGGTCTCATCCATTAGCAGTGGGAGTAGTTACATATACTACGCAGACTCAGTAAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.5% (236/247)  IGHV3-21*01  137  ...................T...A.T.............................G..................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  I  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  K  T  P  E  G  G  
                    Query_8464   181  AGAACTCACTGTATCTGCAAATTAACAGCCTGAGAGCCGACGACACGGCTGTATATTACTGTGCGAGGGTAAAGACCCCGGAGGGCGGCT  270
V  95.5% (236/247)  IGHV3-21*01  227  ......................G.................G...........G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD6-19*01  13   --------------------------------------------------------------------------------------....  16

                                      IMGT--------------------->                                 
                                      W  H  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8464   271  GGCACTACTACTACGGCTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (6/6)     IGHD6-19*01  17   ..---------------------------------------------------------  18
J  96.4% (54/56)    IGHJ6*02     7    ---.............TA.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_77864

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           297     7e-83
IGHD3-10*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTTTCAGG	TACTATGGTTCGG	CGGATTCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTTCAGGTACTATGGTTCGGCGGATTCT	ARAFRYYGSADS	235	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	120	21	17	1	3	81
FR3-IMGT	121	234	114	102	12	0	89.5
CDR3-IMGT (germline)	235	241	7	7	0	0	100
Total	N/A	N/A	244	219	22	3	89.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  D  S  Y  F  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8465   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCAGTGATTCGTACTTCAGCTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  89.8% (219/244)  IGHV4-59*01  49   ...................C...........G..........AG..AC....GG.......................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y     S  G  S  S  S  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  I  S  K  N 
                    Query_8465   91   TGGATTGGGTATATCTAT---AGTGGGAGCTCCAGCTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCTGACATATCCAAGAAC  177
V  89.8% (219/244)  IGHV4-59*01  139  ..................TAC.........A...A......................................TA....CG.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  T  Y  Y  C  A  R  A  F  R  Y  Y  G  S  A  D 
                    Query_8465   178  CACTTCTCCCTGAGGTTGACCTCTGTGACCGCTGCGGACACGGCCACATATTACTGTGCGAGAGCTTTCAGGTACTATGGTTCGGCGGAT  267
V  89.8% (219/244)  IGHV4-59*01  229  ..G..........A.C...G.........................GTG................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD3-10*01  5    ------------------------------------------------------------------------.............-----  17

                                      -->                                  
                                       S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_8465   268  TCTTGGGGCCAGGGAGCCCTCGTCACCGTCTCCTCAG  304
J  94.1% (32/34)    IGHJ4*02     15   ---............A....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_343912

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_8466   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_8466   91   GAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ...................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_8466   181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8466   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_343919

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHD1-26*01                                                                                           18.0    0.56  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	AGCA	AGTGGGAGC	CTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAAGCAAGTGGGAGCCTTATGACTCC	ARSKWEPYDS	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8467   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGTACCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.4% (239/248)  IGHV3-74*01  47   ....................................C........G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  K  S  D  G  S  S  G  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8467   91   TGTGGGTCTCACGTATTAAAAGTGATGGGAGTAGCGGAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (239/248)  IGHV3-74*01  137  ...................T...............AC..G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  H  M  N  N  L  R  A  E  D  T  A  L  Y  Y  C  A  R  S  K  W  E  P  Y  D  
                    Query_8467   181  AGAACACGCTGTATCTGCACATGAACAATCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCAAGAAGCAAGTGGGAGCCTTATGACT  270
V  96.4% (239/248)  IGHV3-74*01  227  ...................A.......G......................G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD1-26*01  6    ------------------------------------------------------------------------.........---------  14
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8467   271  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_95309

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           349     3e-98
IGHD2-15*01                                                                                           14.1    9.9  
IGHJ4*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGAG	GGCC	GGATATT	CCTCTGATGGACGTGAATATATGACCCCGCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGGGCCGGATATTCCTCTGATGGACGTGAATATATGACCCCGCTCTTTGACCTT	TRAGYSSDGREYMTPLFDL	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	69	6	0	92
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	98	16	0	86
CDR3-IMGT (germline)	291	295	5	4	1	0	80
Total	N/A	N/A	293	258	35	0	88.1


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I 
                    Query_8468   3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGACGATCTCCTGCCAGGCATCCGGTTACAGTTTTATC  92
V  88.1% (258/293)  IGHV1-18*04  1    .....T.................................................A.G........A....T..T.......CC....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  H  K  G  N  T  K  Y 
                    Query_8468   93   AATTACGGTATCAGTTGGGTGCGACAGGCCCCTGGACAGGGCCTCGAGTGGATGGGATGGATCAGCGCGCACAAAGGTAACACAAAATAT  182
V  88.1% (258/293)  IGHV1-18*04  91   .GC...........C.......................A..G..T.......................TT....T...........C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  Y  L  D  V  T  S  L  R  S  D  D 
                    Query_8468   183  GCACAGAGTTTCCAGGGCAGAGTCACCATGACCACAGACACACTCACGGGCACAGCGTACCTGGACGTGACGAGTCTGCGATCTGACGAC  272
V  88.1% (258/293)  IGHV1-18*04  181  .......AGC................................TC....A.......C...A....GC...G...C...A...........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  D  V  Y  Y  C  T  R  A  G  Y  S  S  D  G  R  E  Y  M  T  P  L  F  D  L  W  G  Q  G  T 
                    Query_8468   273  ACGGACGTTTATTACTGTACGAGGGCCGGATATTCCTCTGATGGACGTGAATATATGACCCCGCTCTTTGACCTTTGGGGCCAGGGAACC  362
V  88.1% (258/293)  IGHV1-18*04  271  ....C...G.........G....-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (7/7)     IGHD2-15*01  2    ---------------------------.......--------------------------------------------------------  8
J  86.4% (38/44)    IGHJ4*02     5    -----------------------------------------------------------------.......TAC...............  29

                                                         
                                       P  V  S  F  S  S  
                    Query_8468   363  CCGGTCTCCTTCTCCTCAG  381
J  86.4% (38/44)    IGHJ4*02     30   .T....A..G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_23563

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           280     1e-77
IGHD3-3*01                                                                                            21.8    0.042
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	CCTGTCCCGCGTTATGG	TTTCTGGAATGGTTATT	CCAAAATCTAACTCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCCTGTCCCGCGTTATGGTTTCTGGAATGGTTATTCCAAAATCTAACTCTTTCGACACC	ARGLSRVMVSGMVIPKSNSFDT	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	212	33	0	86.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  L  D  G  H  Y  W  T  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_8469   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGGTCGCTCGATGGTCACTACTGGACCTGGATACGCCAGGCCCCAGGGAAGGGTCTGGAG  90
V  86.5% (212/245)  IGHV4-34*01  49   ..................G......A.........CT..AG....T.........G......C......C.............G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  T  G  D  T  N  Y  N  S  S  L  K  S  R  V  G  L  S  V  D  T  S  R  N 
                    Query_8469   91   TGGATTGGGGAGATTTCTCATACTGGAGACACCAACTACAACTCGTCCCTCAAGAGTCGAGTCGGCTTGTCAGTTGACACGTCCAGGAAC  180
V  86.5% (212/245)  IGHV4-34*01  139  ...........A..CAA.....G....AG.............C....................AC.A.A.....A..........A....  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  T  S  L  T  G  A  D  T  G  V  Y  Y  C  A  R  G  L  S  R  V  M  V  S  G 
                    Query_8469   181  CAGTTCTCCCTGAAGTTGACCTCCCTGACCGGCGCGGACACGGGTGTCTATTACTGTGCGCGAGGCCTGTCCCGCGTTATGGTTTCTGGA  270
V  86.5% (212/245)  IGHV4-34*01  229  ...............C...G...TG......C...........C...G............A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  88.2% (15/17)    IGHD3-3*01   10   ----------------------------------------------------------------------------------...T....  17

                                      -IMGT--------------------------->                                  
                                       M  V  I  P  K  S  N  S  F  D  T  W  G  P  G  V  L  V  T  V  S  S  
                    Query_8469   271  ATGGTTATTCCAAAATCTAACTCTTTCGACACCTGGGGCCCGGGAGTCCTGGTTACCGTCTCCTCAG  337
D  88.2% (15/17)    IGHD3-3*01   18   G........----------------------------------------------------------  26
J  88.4% (38/43)    IGHJ5*02     9    ------------------------......C.........A....AC......C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_307188

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            304     9e-85
IGHD1-7*01                                                                                            14.1    8.2  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAACTTTCGCGACATAT	GAACTAC	A	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAACTTTCGCGACATATGAACTACATATGGACGTC	AKTFATYELHMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	219	25	0	89.8


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  N  N  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_8470  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTAATAATTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  89.8% (219/244)  IGHV4-4*02  49   ..................G.................A....C....G...C.......G...............................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  N  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  M  S  M  A  K  L  K 
                    Query_8470  91   GAGTGGATTGGCGAAATCTATCATAATGGCAACACCAACTACAACCCGTCCCTCCAGAGTCGGGTCACCATGTCAATGGCCAAGTTGAAG  180
V  89.8% (219/244)  IGHV4-4*02  139  ...........G.............G...G.G......................A.......A........A...G.A.A.....CC...  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                      N  Q  F  F  L  K  L  N  D  V  T  A  A  D  T  A  V  Y  Y  C  A  K  T  F  A  T  Y  E  L  H 
                    Query_8470  181  AATCAGTTCTTCCTGAAACTGAACGATGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAAAACTTTCGCGACATATGAACTACAT  270
V  89.8% (219/244)  IGHV4-4*02  229  ..C.......C......G....G.TC........................G.............--------------------------  292
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD1-7*01  11   ---------------------------------------------------------------------------------.......--  17
J  97.7% (42/43)    IGHJ6*02    20   -----------------------------------------------------------------------------------------.  20

                                     -------->                                 
                                      M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_8470  271  ATGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  312
J  97.7% (42/43)    IGHJ6*02    21   ...............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_307189

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           315     5e-88
IGHD3-9*01                                                                                            44.9    5e-09
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	TCTCCGAAGCC	TATTACGATATTATGACTGATTATTATAA	GGGGGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CTCAGAGTCTCCGAAGCCTATTACGATATTATGACTGATTATTATAAGGGGGCTTTTGACTTC	LRVSEAYYDIMTDYYKGAFDF	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	20	4	0	83.3
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	4	3	0	57.1
Total	N/A	N/A	231	216	15	0	93.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  V  P  G  K  G  L  A  W  V  S  R  I  
                    Query_8471   14   GTGCAGCCTCTGGATTCACCTTTAGTACCTACTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGGCTGGCTTGGGTCTCACGTATCA  103
V  93.5% (216/231)  IGHV3-74*01  65   ......................C....G..........................C.................TG..............T.  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  D  G  S  K  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  
                    Query_8471   104  GTAGTGATGGGAGTAAGACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTCTATCTGC  193
V  93.5% (216/231)  IGHV3-74*01  155  A..............GC....G............................................................G.......  244
                                      N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------------------CDR3-IMGT----------
                                      Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  L  R  V  S  E  A  Y  Y  D  I  M  T  D  Y  Y  
                    Query_8471   194  AAATGAACAGTCTGAGAGACGAGGACACGGCTGTGTATTACTGTCTCAGAGTCTCCGAAGCCTATTACGATATTATGACTGATTATTATA  283
V  93.5% (216/231)  IGHV3-74*01  245  ..................C.........................GCA....---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  93.1% (27/29)    IGHD3-9*01   2    --------------------------------------------------------------............T......G........  29

                                      ---------------->                                  
                                      K  G  A  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8471   284  AGGGGGCTTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  93.1% (27/29)    IGHD3-9*01   30   .--------------------------------------------------  30
J  97.7% (42/43)    IGHJ4*02     6    --------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_321451

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           296     2e-82
IGHD3-3*01                                                                                            12.2    31   
IGHJ3*01                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ3*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCT	TTACGA	AGGCCTCTCTTTTCCTT	TCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCTTTACGAAGGCCTCTCTTTTCCTTTC	ARDLYEGLSFPF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	217	28	0	88.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  N  V  S  G  T  S  I  S  P  Y  F  W  S  W  N  R  Q  H  P  G  Q  G  L  E 
                    Query_8472   1    ACCCTGTCCCTCACCTGTAATGTCTCTGGGACCTCCATCAGTCCTTACTTCTGGAGCTGGAACCGGCAGCACCCGGGGCAGGGACTGGAG  90
V  88.6% (217/245)  IGHV4-59*01  49   .................C.C.........TGG..........AG.....A...........T........C...A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  *  V  N  Y  S  G  S  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S  N  S 
                    Query_8472   91   TGGATTGGATAAGTCAATTACAGTGGGAGCACCAATTACAACACCTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAACAGC  180
V  88.6% (217/245)  IGHV4-59*01  139  ........G..TA..T...................C......C.........................A.................G.A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  L  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  Y  E  G  L  S  F  P 
                    Query_8472   181  CAGTTGTCCCTGACGTTGTCTTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGACCTTTACGAAGGCCTCTCTTTTCCT  270
V  88.6% (217/245)  IGHV4-59*01  229  .....C.......A.C..AGC................................C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-3*01   4    --------------------------------------------------------------------......----------------  9

                                      -->                                  
                                       F  W  G  P  G  T  M  V  T  V  S  S  
                    Query_8472   271  TTCTGGGGCCCAGGGACAATGGTCACCGTCTCCTCAG  307
J  94.4% (34/36)    IGHJ3*01     15   -.........A.....................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_307182

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8473   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_8473   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_8473   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8473   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_307183

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           299     2e-83
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	240	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	217	26	0	89.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E  
                    Query_8474   4    CCCTGAGACTCTCCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAGT  93
V  89.3% (217/243)  IGHV4-59*01  50   .....TCC...A................T..........GTAG..A..A......C............C.....GG..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  G  T  S  K  N  
                    Query_8474   94   GGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGGCACGTCCAAGAACC  183
V  89.3% (217/243)  IGHV4-59*01  140  ..A....G...A.....T..........C.....C.....................................T..A..............  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------CDR3-IMGT-------->       
                                      Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G  
                    Query_8474   184  AGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGCC  273
V  89.3% (217/243)  IGHV4-59*01  230  ..T...............G................................A...........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (7/7)     IGHD5-18*01  10   ---------------------------------------------------------------.......--------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------------------------------.....T.........  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_8474   274  AGGGAACCCTGGTCACCGTCTCCTCAG  300
J  97.6% (41/42)    IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_307180

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           353     1e-99
IGHD3-10*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGAGGTCTT	TGGTTCGGGGAG	AAAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATGGGAGGTCTTTGGTTCGGGGAGAAACCTACTTCTACAGTATGGACGTC	VRDGRSLVRGETYFYSMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  N  F  S  T  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8475   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCAATTTCAGTACTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-48*03  47   .....................C..............CC.......G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  G  S  T  I  T  I  Y  Q  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8475   91   AGTGGGTTTCATACATTAGTGGTAGTACTATTACCATATACCAGGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-48*03  137  ....................A.....GG..G..........T.C..............................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  G  R  S  L  V  R  
                    Query_8475   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCTGTTTATTACTGTGTGAGAGATGGGAGGTCTTTGGTTCGGG  270
V  95.2% (238/250)  IGHV3-48*03  227  ........................................G......................C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD3-10*01  10   ---------------------------------------------------------------------------------.........  18

                                      -IMGT----------------------->                                
                                      G  E  T  Y  F  Y  S  M  D  V  W  G  Q  G  T  S  V  T  V  S  S
                    Query_8475   271  GAGAAACCTACTTCTACAGTATGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTC  331
D  100.0% (12/12)   IGHD3-10*01  19   ...----------------------------------------------------------  21
J  94.4% (51/54)    IGHJ6*02     8    -------.....A....G..........................A................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_307181

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD6-25*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTC	ARQSSAGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  S  S  G  Y  D  F  L  D  Y
                    Query_8476   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGAGTTCTGGATACGACTTTCTCGACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ..............................A.....C...........................G...........AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_8476   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G.......................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8476   181  GTCATTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGAACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  ...C.........................................C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  M  V  T  V  S  S
                    Query_8476   271  CAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTC  360
V  95.2% (277/291)  IGHV5-51*01  276  ..T..................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------...............................C...............  61

                                       
                                       
                    Query_8476   361  A  361
J  97.9% (47/48)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_307186

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHJ6*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	N/A	TAGAAATCC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAGAAATCCCTACGGTTTGGACGTC	AKDRNPYGLDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  F  A  M  T  W  V  R  Q  P  P  G  K  G  L  
                    Query_8477   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAGCAACTTTGCCATGACCTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-23*01  47   .....................C.......................G..A........G.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  A  S  G  D  G  T  Y  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  F  
                    Query_8477   91   AGTGGGTCTCGGGAATAAGTGCTTCTGGTGATGGCACATACTACGCAGACTCCGTGAAGGGCCGGCTCACCATCTCCAGAGACAATTTCA  180
V  90.4% (226/250)  IGHV3-23*01  137  ..........A.CT..T....G.AG.....G.A................................T.....................C..  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      N  N  T  L  Y  L  Q  I  N  S  L  R  V  D  D  T  A  I  Y  Y  C  A  K  D  R  N  P  Y  G  L  
                    Query_8477   181  ACAATACACTGTATCTGCAAATCAACAGCCTGAGAGTCGACGACACGGCCATTTATTACTGTGCGAAAGATAGAAATCCCTACGGTTTGG  270
V  90.4% (226/250)  IGHV3-23*01  227  .G..C..G..............G.............C...G.........G.A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
J  95.6% (43/45)    IGHJ6*02     14   -------------------------------------------------------------------------------.......A...  24

                                      ---->                             
                                      D  V  W  G  Q  G  N  T  V  T  V  S
                    Query_8477   271  ACGTCTGGGGCCAAGGGAACACGGTCACCGTCTC  304
J  95.6% (43/45)    IGHJ6*02     25   ..................C...............  58


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_307184

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD5-18*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGT	TGGATACAACTATGGTTAC	CCTCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTTGGATACAACTATGGTTACCCTCCCTTTGACTAC	ARGVGYNYGYPPFDY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_8478   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  95.5% (232/243)  IGHV4-59*01  50   .....TCC...A..............................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  F  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  P  V  D  T  S  K  N  
                    Query_8478   94   GGATTGGCTTTATCTATTACACTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGTGTCACCATACCAGTAGACACGTCCAAGAACC  183
V  95.5% (232/243)  IGHV4-59*01  140  .......G.A...........G......C.............................A.........T.....................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  Y  N  Y  G  Y  P  
                    Query_8478   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGGTTGGATACAACTATGGTTACCCTC  273
V  95.5% (232/243)  IGHV4-59*01  230  ...............................T...............................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  94.7% (18/19)    IGHD5-18*01  2    -------------------------------------------------------------------........G..........----  20

                                      ---------->                                  
                                      P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8478   274  CCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (44/44)   IGHJ4*02     5    -............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_307185

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD6-19*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGCCCCCCGTCCCGCA	TATAGCAGTGCCTG	CCACG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGCCCCCCGTCCCGCATATAGCAGTGCCTGCCACGGACTAC	ARWPPVPHIAVPATDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  R  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8479   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTAGGTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.9% (238/243)  IGHV4-59*01  49   ......................................C.....T.............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  M  N 
                    Query_8479   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCATGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  .....................................................................................A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  M  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  W  P  P  V  P  H  I  A  V 
                    Query_8479   181  CAGTTCTCCCTGAAGATGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGATGGCCCCCCGTCCCGCATATAGCAGTG  270
V  97.9% (238/243)  IGHV4-59*01  229  ...............C.....................................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  4    --------------------------------------------------------------------------------..........  13

                                      -------------->                                  
                                       P  A  T  D  Y  W  G  Q  G  T  L  V  F  V  S  S  
                    Query_8479   271  CCTGCCACGGACTACTGGGGCCAGGGAACCCTGGTCTTCGTCTCCTCAG  319
D  92.9% (13/14)    IGHD6-19*01  14   G...---------------------------------------------  17
J  95.0% (38/40)    IGHJ4*02     9    ---------...........................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_293199

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGGG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRGSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	44	6	0	88
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	241	27	6	88


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_8480   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCCGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.0% (241/274)  IGHV4-34*01  26   ........T.......T............T.............T..C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_8480   91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.0% (241/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_8480   181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.0% (241/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  G  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  G  V  S  V  S  S 
                    Query_8480   271  GAGGCCACCGGGGGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGGGGTCTCCGTCTCCTCA  359
V  88.0% (241/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  89.6% (43/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................AC....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_95303

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            321     6e-90
IGHD4-4*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGCTTCTGGAGA	TGACTACA	ATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGCTTCTGGAGATGACTACAATCTTGACTCC	ARVASGDDYNLDS	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8481  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGTGACTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.2% (227/249)  IGHV3-7*03  47   ....................................C.......AG............C...............................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  Y  I  N  H  D  S  T  E  K  Y  Y  V  E  S  L  R  G  R  L  T  I  S  R  D  N  A  
                    Query_8481  91   AGTGGGTGGCCTACATAAACCATGATTCAACTGAGAAGTACTATGTGGAGTCATTGAGGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  91.2% (227/249)  IGHV3-7*03  137  ...........A.......G..A...GG..G......A...........C..TG...A.......T........................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                     K  N  S  L  F  L  Q  M  E  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  A  S  G  D  D  Y  
                    Query_8481  181  AGAACTCACTGTTTCTCCAAATGGAGAGCCTGAGAGCCGACGACACGGCCGTTTATTACTGTGCGAGAGTCGCTTCTGGAGATGACTACA  270
V  91.2% (227/249)  IGHV3-7*03  227  ............A...G......A.C..............G...........G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD4-4*01  1    ----------------------------------------------------------------------------------........  8

                                     ---------->                                  
                                     N  L  D  S  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_8481  271  ATCTTGACTCCTGGGGCCAGGGTACCCTGGTCTCCGTCTCCTCAG  315
J  92.9% (39/42)    IGHJ4*02    7    ---......A............A.........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_334705

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     7e-98
IGHD1-20*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCAT	TAACTGGAACG	GACACCCATACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGCCATTAACTGGAACGGACACCCATACAACTTTGACTCC	VRAINWNGHPYNFDS	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	233	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8482   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  95.5% (233/244)  IGHV4-59*01  49   ........................................G.AG..........................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  I  S  K  N 
                    Query_8482   91   TGGATTGGATATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGATATCTCCAAGAAC  180
V  95.5% (233/244)  IGHV4-59*01  139  ........G....................................................................C.CG.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  A  I  N  W  N  G  H  P  Y 
                    Query_8482   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGTGAGAGCCATTAACTGGAACGGACACCCATAC  270
V  95.5% (233/244)  IGHV4-59*01  229  ...................G......................................C.....--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (11/11)   IGHD1-20*01  5    --------------------------------------------------------------------...........-----------  15

                                      ----------->                                  
                                       N  F  D  S  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_8482   271  AACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  316
J  95.6% (43/45)    IGHJ4*02     4    -.........A...............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_23560

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD5-18*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGCCATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGCCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	240	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_8483   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAAAGACTGGAG  90
V  98.8% (240/243)  IGHV4-59*01  49   .........................................T......................................GG........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8483   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (240/243)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D 
                    Query_8483   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGCCATGGTTACGGAGGAGTTGAC  270
V  98.8% (240/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD5-18*01  6    ---------------------------------------------------------------......T........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8483   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_159334

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-72*01                                                                                           343     2e-96
IGHD5-18*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-72*01	IGHD5-18*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCTA	CACTGG	GTGGATACATCGATGGTT	CGGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTACACTGGGTGGATACATCGATGGTTCGGGTGCTTTTGATATC	ATLGGYIDGSGAFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	129	30	27	3	0	90
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	247	4	4	0	0	100
Total	N/A	N/A	235	227	8	0	96.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  D  Y  H  M  D  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I 
                    Query_8484   13   TGTGCAGCCTCTGGATTCACATTCAGTGACTACCACATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATT  102
V  96.6% (227/235)  IGHV3-72*01  64   ....................C.........C..T......................................................C.  153
                                       C  A  A  S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  T 

                                      --------CDR2-IMGT---------><----------------------------------------------------FR3-IMGT--
                                       R  N  K  V  S  S  Y  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  S  L 
                    Query_8484   103  AGAAACAAAGTTAGCAGTTACACCACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACAATCTCAAGAGATGATTCAAAGAACTCACTG  192
V  96.6% (227/235)  IGHV3-72*01  154  ..........C..A.............................................C..............................  243
                                       R  N  K  A  N  S  Y  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  S  L 

                                      --------------------------------------------------><-----------------CDR3-IMGT------------
                                       Y  L  Q  M  N  S  L  K  T  E  D  T  A  M  Y  Y  C  A  T  L  G  G  Y  I  D  G  S  G  A  F 
                    Query_8484   193  TATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCATGTATTACTGTGCTACACTGGGTGGATACATCGATGGTTCGGGTGCTTTT  282
V  96.6% (227/235)  IGHV3-72*01  244  .......................................G...............-----------------------------------  298
                                       Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A                                     
D  88.9% (16/18)    IGHD5-18*01  1    -------------------------------------------------------------.........G.T......-----------  18
J  100.0% (47/47)   IGHJ3*02     4    -----------------------------------------------------------------------------------.......  10

                                      ----->                                  
                                       D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8484   283  GATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  100.0% (47/47)   IGHJ3*02     11   ........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_321457

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           335     4e-94
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_8485   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.9% (229/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  N  R  V  T  I  S  V  D  T  S 
                    Query_8485   91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAATCGAGTCACCATTTCCGTAGACACGTCC  180
V  93.9% (229/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C....G............A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_8485   181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  93.9% (229/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_8485   271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  319
J  97.9% (47/48)    IGHJ4*02     1    -....................................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_159336

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           335     4e-94
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GCAATTTTCT	TAGTAGAGGTTAT	CCCGGAGAGGATTCCGAGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGCAATTTTCTTAGTAGAGGTTATCCCGGAGAGGATTCCGAGCTTGACTAT	AKGNFLSRGYPGEDSELDY	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	126	24	23	1	0	95.8
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	246	230	16	0	93.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  S  T  F  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_8486   2    CCCTGTCCCTCACCTGCGCAGCCTCTGGATTCACCTTCAGTACCTTTGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGT  91
V  93.5% (230/246)  IGHV3-30*18  50   .....AGA...T....T.........................G..A..G.........................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  A  L  I  S  Y  D  G  T  N  K  Y  Y  T  D  S  V  K  G  Q  F  T  I  S  G  D  N  S  K  
                    Query_8486   92   GGGTGGCACTTATATCATATGATGGAACTAATAAATACTATACAGACTCCGTGAAGGGCCAATTCACCATCTCCGGAGACAATTCCAAGA  181
V  93.5% (230/246)  IGHV3-30*18  140  ........G..................G.............G..................G.............A...............  229
                                      W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------CDR3-IM
                                      N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  G  N  F  L  S  R  G  Y  
                    Query_8486   182  ACACGCTGTATCTGCAAATGAACAGCCTGAGAGTTGAGGACACGGCTGTCTATTATTGTGCGAAAGGCAATTTTCTTAGTAGAGGTTATC  271
V  93.5% (230/246)  IGHV3-30*18  230  .................................C...............G.....C..........------------------------  295
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                          
D  92.3% (12/13)    IGHD3-22*01  13   ----------------------------------------------------------------------------......T......-  25

                                      GT----------------------->                                  
                                      P  G  E  D  S  E  L  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_8486   272  CCGGAGAGGATTCCGAGCTTGACTATTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  331
J  95.2% (40/42)    IGHJ4*02     7    ------------------.......C............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_70924

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_8487   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_8487   91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_8487   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_8487   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_17860

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           333     1e-93
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	GAGATTGCTCTCTACAA	CAGGGGCTGGT	TTCGTGGGCCCCTCCGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGAGATTGCTCTCTACAACAGGGGCTGGTTTCGTGGGCCCCTCCGCCTAC	ARQRLLSTTGAGFVGPSAY	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	232	19	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  S  T  H  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_8488   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTAGTACTCATTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  92.4% (232/251)  IGHV4-39*01  49   ...............................G.................G.T.C....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  G  V  Y  Y  N  L  S  L  R  S  R  L  T  I  S  V  D  T  S 
                    Query_8488   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGGGAGTCTACTACAACTTGTCCCTCAGGAGTCGACTCACCATATCCGTAGACACGTCC  180
V  92.4% (232/251)  IGHV4-39*01  139  .................................A.CAC..........CC........A.......G.......................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  T  L  N  L  S  S  V  T  A  A  D  A  A  L  Y  A  C  A  R  Q  R  L  L  S  T  T 
                    Query_8488   181  AGGAACCAGTTCACCCTGAACCTGAGCTCTGTGACCGCCGCAGACGCGGCTCTGTATGCCTGTGCGAGACAGAGATTGCTCTCTACAACA  270
V  92.4% (232/251)  IGHV4-39*01  229  .A..........T.......G........................A.....G.....TA............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD6-19*01  9    ----------------------------------------------------------------------------------------..  10

                                      3-IMGT----------------------->                                  
                                       G  A  G  F  V  G  P  S  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8488   271  GGGGCTGGTTTCGTGGGCCCCTCCGCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  90.9% (10/11)    IGHD6-19*01  11   .T.......-------------------------------------------------------  19
J  100.0% (38/38)   IGHJ4*02     11   --------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_293194

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           305     3e-85
IGHD7-27*01                                                                                           18.0    0.59 
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCGACTTGAAC	AACTGGGGA	TGGGCAGGGGAGGGTGTTTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCGACTTGAACAACTGGGGATGGGCAGGGGAGGGTGTTTATGATGTC	ATDLNNWGWAGEGVYDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	218	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  I  S  R  Y  Y  W  N  W  I  R  Q  P  P  G  K  A  M  E 
                    Query_8489   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGCCTCCATCAGTCGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGCAATGGAG  90
V  90.5% (218/241)  IGHV4-59*01  49   ...................C...........G..........A............G..........................G.C.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  T  Y  H  T  G  D  T  D  Y  N  P  S  L  R  N  R  V  A  I  S  M  D  A  S  K  N 
                    Query_8489   91   TGGATCGGATATACCTATCACACTGGGGACACCGACTACAACCCCTCCCTCAGGAATCGAGTCGCCATATCAATGGACGCGTCCAAGAAC  180
V  90.5% (218/241)  IGHV4-59*01  139  .....T..G....T....T...G....AG....A..................A..G.......A........G.A...A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  D  L  N  N  W  G  W  A  G 
                    Query_8489   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACGGCTGCGGACACGGCCGTATACTACTGTGCGACCGACTTGAACAACTGGGGATGGGCAGGG  270
V  90.5% (218/241)  IGHV4-59*01  229  .............................C.................G..T..........-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD7-27*01  3    ------------------------------------------------------------------------.........---------  11

                                      ----------------->                                  
                                       E  G  V  Y  D  V  W  G  Q  G  R  M  V  T  V  S  S  
                    Query_8489   271  GAGGGTGTTTATGATGTCTGGGGCCAAGGGAGAATGGTCACCGTCTCTTCAG  322
J  97.6% (40/41)    IGHJ3*01     10   -----------....................C....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_293193

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           310     1e-86
IGHD5-12*01                                                                                           12.2    30   
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCC	GTGGAT	TAAGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCGTGGATTAAGCTTC	ATRGLSF	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  D  M  N  W  L  R  Q  A  P  G  K  G  P  
                    Query_8490   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACTTTCAGTAATTACGACATGAACTGGCTCCGCCAGGCTCCTGGGAAGGGGCCGG  90
V  90.2% (222/246)  IGHV3-48*03  47   .....................C...............C.......G...T..A.........G.............A..........T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  D  I  T  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_8490   91   AGTGGGTCTCATCCATTAGTAGTCGTGGAGATATCACATACTACGCGGACTCAGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.2% (222/246)  IGHV3-48*03  137  .......T....A..........A....TAG..C..T.........A.....T...A.................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  S  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  T  R  G  L  S  F  W  G  
                    Query_8490   181  AGAACTCACTGTCCCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTCTTTATTACTGTGCGACCCGTGGATTAAGCTTCTGGGGCC  270
V  90.2% (222/246)  IGHV3-48*03  227  ............AT......................C...G.........G...............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD5-12*01  1    ---------------------------------------------------------------------......---------------  6
J  94.3% (33/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  A  Q  V  T  V  S  S  
                    Query_8490   271  AGGGAGCCCAGGTCACCGTCTCCTCAG  297
J  94.3% (33/35)    IGHJ4*02     22   .....A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_340779

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           405     4e-115
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	104	10	0	91.2
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	276	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  
                    Query_8491   5    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCTTGTAAGGGTTCTGGATACACCTTTACCA  94
V  94.2% (276/293)  IGHV5-51*03  2    ..G..........................................................C...................G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  
                    Query_8491   95   GCTACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACA  184
V  94.2% (276/293)  IGHV5-51*03  92   ............G.......................A...................................A....G.....A......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  H  V  T  I  S  A  D  R  S  I  T  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  
                    Query_8491   185  GCCCGTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAGGTCCATCACGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACA  274
V  94.2% (276/293)  IGHV5-51*03  182  ...................G...................A........GC...........G...............A.....T......  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_8491   275  CCGCCGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  364
V  94.2% (276/293)  IGHV5-51*03  272  .....A.G...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD6-19*01  5    --------------------------............----------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_8491   365  CCTCAG  370
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_26978

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_8492   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  V  S  V  D  T  S  K  S 
                    Query_8492   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCGTTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T....A.A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  I  S  L  S  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_8492   181  CAGATCTCCCTGAGCCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ...T.........AG........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_8492   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_293191

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            315     5e-88
IGHD2-15*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCATTGTGGA	AGTGGTGG	CTGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCATTGTGGAAGTGGTGGCTGTTTCTACTTTGACATC	ARVHCGSGGCFYFDI	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	46	5	0	90.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	224	23	0	90.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  S  D  S  I  S  G  S  D  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_8493   1    ACCCTGTCCCTCACCTGCGCTGTCTCTAGTGACTCCATCAGCGGTTCTGACTGGTGGACTTGGATCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.7% (224/247)  IGHV4-4*02   49   ...........................G...G..........A..AG.A.........G....G..........................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  S  A  D  T  H  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  N  S  K 
                    Query_8493   91   GAGTGGATCGGAGAGATCCATCATAGTGCGGACACCCACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAACTCTAAG  180
V  90.7% (224/247)  IGHV4-4*02   139  ........T..G..A...T.........G.AG....A..............................................G..C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  E  L  R  S  V  T  A  A  D  A  A  L  Y  Y  C  A  R  V  H  C  G  S  G  G  C 
                    Query_8493   181  AACCAATTCTCCCTGGAGCTGAGGTCTGTGACCGCCGCGGACGCGGCCCTGTATTACTGTGCGAGAGTTCATTGTGGAAGTGGTGGCTGT  270
V  90.7% (224/247)  IGHV4-4*02   229  .....G.........A.......C..................A.....G..................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD2-15*01  11   ------------------------------------------------------------------------------........----  18

                                      -------------->                                  
                                       F  Y  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8493   271  TTCTACTTTGACATCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  95.7% (45/47)    IGHJ4*02     2    --..........TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_211908

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  R  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_8494   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAGGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    .............................A..A................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_8494   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  P  A
                    Query_8494   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACCCCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .......C.....................................C...........G......A....................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_8494   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_8494   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_24650

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           37.2    1e-06 
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAG	TTACTTTGATAGTAGTGGTTAT	GCTCAGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTACTTTGATAGTAGTGGTTATGCTCAGGACGGTATGGACGTC	ARESYFDSSGYAQDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8495   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  S  I  S  S  S  S  N  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8495   91   ACTGGGTCTCATCCATTAGTAGTAGTAGTAATTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  .G............................G...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  R  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  S  Y  F  D  S  S  
                    Query_8495   181  AGAACTCACTGTATCTGCAAATGAACAGGCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAAAGTTACTTTGATAGTAGTG  270
V  98.4% (246/250)  IGHV3-21*01  227  ............................C.........................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.5% (21/22)    IGHD3-22*01  4    -------------------------------------------------------------------------.....A...........  20

                                      IMGT--------------------->                                 
                                      G  Y  A  Q  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8495   271  GTTATGCTCAGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  95.5% (21/22)    IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_26972

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           300     8e-84
IGHD2-2*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTACATTTGGAAATGA	CAGATGCTAAGCC	TCGTAT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGATTTACATTTGGAAATGACAGATGCTAAGCCTCGTATCTTTGATTTC	TRDLHLEMTDAKPRIFDF	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	25	4	0	86.2
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  S  S  G  F  K  F  N  S  Y  S  M  N  W  V  R  Q  A  P  G  E  G  L  
                    Query_8496   1    GGTCCCTGAGACTCTCCTGTGCCTCCAGTGGATTCAAATTTAATAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGGAGGGACTGG  90
V  88.4% (221/250)  IGHV3-21*01  47   ......................AG..TC........CC..C.G...C.................................A....G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  N  T  F  G  T  Y  L  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  A  N  A  
                    Query_8496   91   AGTGGGTCGCCTCCATTAATACTTTTGGAACTTACCTATATTATGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGGGCCAACGCCA  180
V  88.4% (221/250)  IGHV3-21*01  137  ........T.A.......G..G.AG.A.T.G....A....C..C...................................A.A........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  D  L  H  L  E  M  T  
                    Query_8496   181  AAAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTACGAGAGATTTACATTTGGAAATGACAG  270
V  88.4% (221/250)  IGHV3-21*01  227  .G..........A.......................................G.........G.......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.6% (11/13)    IGHD2-2*01   19   ---------------------------------------------------------------------------------------...  21

                                      IMGT--------------------->                                  
                                      D  A  K  P  R  I  F  D  F  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_8496   271  ATGCTAAGCCTCGTATCTTTGATTTCTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  330
D  84.6% (11/13)    IGHD2-2*01   22   C.....T...--------------------------------------------------  31
J  93.2% (41/44)    IGHJ4*02     5    ----------------......C.A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_211907

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_8497   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T..........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  R  S  E 
                    Query_8497   91   GAGTGGATTGGGGAGATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCAAGTCTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ..............A....A..A..............A...................AG............A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  M  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_8497   181  AACCAGTTCTCCCTGATGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................A.....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8497   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_26970

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43D*01                                                                                          321     7e-90
IGHD2-21*01                                                                                           14.1    8.8  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43D*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCTAA	GTCTCTACGTCGCTTA	GGTGATT	CTCCTCGACGATCAC	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAAGTCTCTACGTCGCTTAGGTGATTCTCCTCGACGATCACACGGTATGGACGTC	AKSLRRLGDSPRRSHGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          P  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  Y  W  V  R  Q  G  P  G  K  G  L  
                    Query_8498    1    GGCCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTACGCCATGTACTGGGTCCGTCAAGGTCCGGGGAAGGGTCTGG  90
V  91.5% (226/247)  IGHV3-43D*01  47   ..T..............................................T......C...............C.................  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  S  L  I  S  W  D  A  T  T  A  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  K  R  
                    Query_8498    91   AGTGGGTCTCTCTTATTAGTTGGGATGCCACTACCGCATACTACGCAGACTCTGTGAAGGGTCGATTCACCATCTCCAGAGACAAGAGAA  180
V  91.5% (226/247)  IGHV3-43D*01  137  ...........................GTGG..G.A.C.....T.........................................C..C.  226
                                       E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                       K  N  S  L  Y  L  Q  M  N  S  L  G  P  D  D  T  A  L  Y  Y  C  A  K  S  L  R  R  L  G  D  
                    Query_8498    181  AAAACTCCCTGTATTTGCAAATGAACAGTCTGGGACCTGACGACACCGCCTTATATTACTGCGCTAAGTCTCTACGTCGCTTAGGTGATT  270
V  91.5% (226/247)  IGHV3-43D*01  227  ..............C.................A..G....G...........G........T..A..-----------------------  293
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-21*01   14   -----------------------------------------------------------------------------------.......  20

                                       -IMGT----------------------->                                 
                                       S  P  R  R  S  H  G  M  D  V  W  G  R  G  T  T  V  I  V  S  S 
                    Query_8498    271  CTCCTCGACGATCACACGGTATGGACGTCTGGGGCCGAGGGACCACGGTCATTGTCTCCTCA  332
J  93.6% (44/47)    IGHJ6*02      16   ---------------.....................A..............CC.........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_211905

Length=317
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           338     4e-95
IGHD3-16*01                                                                                           14.1    7.7  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCC	GTATTAT	CGC	ATCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCCCGTATTATCGCATC	TRGPYYRI	237	260	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	111	3	0	97.4
CDR3-IMGT (germline)	237	243	7	6	1	0	85.7
Total	N/A	N/A	232	224	8	0	96.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 
                    Query_8499   12   TGTGCAGCCTCTGGATTCACCTTCAGTAACTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAATGGGTTTCATACATT  101
V  96.6% (224/232)  IGHV3-48*03  64   ............................GT............................................G...............  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  S  G  S  P  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_8499   102  AGTAGTAGTGGTAGTCCCATATATTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTG  191
V  96.6% (224/232)  IGHV3-48*03  154  ...............A.......C..................................................................  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------CDR3-IMGT------>                     
                                       Q  T  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  G  P  Y  Y  R  I  W  G  Q  G  T  M  V 
                    Query_8499   192  CAAACTAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTACGAGAGGCCCGTATTATCGCATCTGGGGCCAAGGGACAATGGTC  281
V  96.6% (224/232)  IGHV3-48*03  244  ....TG.......................................G......--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (7/7)     IGHD3-16*01  1    --------------------------------------------------------.......---------------------------  7
J  100.0% (36/36)   IGHJ3*02     14   ------------------------------------------------------------------........................  37

                                                  
                                       T  V  S  S 
                    Query_8499   282  ACCGTCTCTTCA  293
J  100.0% (36/36)   IGHJ3*02     38   ............  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30621390


Query= Query_110412

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           291     5e-81
IGHD3-22*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAC	ATAGTACTGG	CCGAATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATAGTACTGGCCGAATCATTGACTAT	ARAHSTGRIIDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G 
                    Query_8500   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  87.2% (218/250)  IGHV4-31*01  49   ...................C................A...G.A....TGG..A...C....G.............CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  Y  I  Y  H  V  E  S  T  S  R  N  P  S  L  K  S  Q  L  T  I  S  L  D  P  S 
                    Query_8500   91   CTGGAGTGGATGGGATACATCTATCACGTTGAGAGCACCTCCCGCAACCCGTCCCTCAAGAGTCAACTTACCATTTCACTCGACCCGTCT  180
V  87.2% (218/250)  IGHV4-31*01  139  ...........T..G.........T..AG..G........A.TA....................T.G.......A...G.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  S  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  S  T  G  R  I 
                    Query_8500   181  AAGAGCCAGTTCTCCCTAAAACTGACCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCACATAGTACTGGCCGAATC  270
V  87.2% (218/250)  IGHV4-31*01  229  ....A............G..G....G....G.......................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-22*01  12   -------------------------------------------------------------------------......G...-------  21

                                      -------->                                  
                                       I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8500   271  ATTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.6% (41/42)    IGHJ4*02     7    -.......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_211903

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           297     7e-83
IGHD3-9*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGACCCA	TACGGTATTTTG	GCTATTGAGAAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGTGACCCATACGGTATTTTGGCTATTGAGAAG	ATGDPYGILAIEK	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	42	9	0	82.4
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  N  Y  W  S  W  I  R  Q  S  P  A  K  G 
                    Query_8501   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGCCAACTACTGGAGTTGGATCCGCCAATCCCCTGCAAAGGGC  90
V  88.0% (220/250)  IGHV4-31*03  49   .................................................GTT..........C...........GCA...A.GG......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  T  T  E  Y  N  P  S  L  K  S  R  L  T  M  S  I  D  P  S 
                    Query_8501   91   CTCGAGTGGATTGGATACATCTATTATGGTGGGACCACCGAGTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCCATTGACCCGTCT  180
V  88.0% (220/250)  IGHV4-31*03  139  ..G...........G...........CA......G....T.C...........C............G.T.....A..AG.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       T  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  D  P  Y  G  I  L 
                    Query_8501   181  ACGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGTGACCCATACGGTATTTTG  270
V  88.0% (220/250)  IGHV4-31*03  229  .A...................C...G...........................G.............G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD3-9*01   5    ------------------------------------------------------------------------------....A.......  16

                                      ----------->                                
                                       A  I  E  K  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8501   271  GCTATTGAGAAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
J  100.0% (32/32)   IGHJ4*02     15   ------------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_26974

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*04                                                                                           383     1e-108
IGHD1-26*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*04	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGGGTCCT	TATAGTGGGAGC	CCGCAAGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACTTC	AKPGPYSGSPQGYFDF	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	16	8	0	66.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  A  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  F
                    Query_8502   1    GCAGCTGGTGCAGTCTGGAGGAGCCTTAGTGCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTT  90
V  92.4% (267/289)  IGHV3-23*04  6    ..........G.......G....G...G..A.......................................................G..A  95
                                        Q  L  V  E  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I  T  E  T  G  R  N  S  Y  Y  A  D
                    Query_8502   91   CGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAACTATTACTGAGACTGGTCGTAATTCATACTACGCAGA  180
V  92.4% (267/289)  IGHV3-23*04  96   T...................................................G......G..GT.G....G...GCA.............  185
                                        A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  I  I  S  R  D  K  S  K  N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A
                    Query_8502   181  CTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCAAGAACACACTGTATCTGCAAATGAACACCCTGAGAGCCGAGGACACGGC  270
V  92.4% (267/289)  IGHV3-23*04  186  ...............G....C...............T...........G...................G.....................  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  K  P  G  P  Y  S  G  S  P  Q  G  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S
                    Query_8502   271  CGTATATTACTGTGCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTC  360
V  92.4% (267/289)  IGHV3-23*04  276  ...................-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  K                                                                        
D  100.0% (12/12)   IGHD1-26*01  3    ----------------------------............--------------------------------------------------  14
J  97.8% (45/46)    IGHJ4*02     3    -------------------------------------------------..........A..............................  43

                                           
                                        S  
                    Query_8502   361  CTCAG  365
J  97.8% (45/46)    IGHJ4*02     44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_26975

Length=411
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            439     2e-125
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CCCCCTTTCTTCTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCCCCCTTTCTTCTTCTACGGTATGGACGTC	ARDRLASYDSTGYPPFFFYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	286	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_8503   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  98.3% (286/291)  IGHV1-2*04   6    ..................G.............AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  R  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_8503   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACGAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.3% (286/291)  IGHV1-2*04   96   ................................A.........................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_8503   181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  98.3% (286/291)  IGHV1-2*04   186  ..........................................................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  P  P  F  F  F  Y  G  M  D  V  L  G  Q
                    Query_8503   271  CGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCCCCCTTTCTTCTTCTACGGTATGGACGTCTTGGGCCA  360
V  98.3% (286/291)  IGHV1-2*04   276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  95.9% (47/49)    IGHJ6*02     14   ------------------------------------------------------------------.................G......  37

                                                               
                                        G  T  T  V  P  V  S  S 
                    Query_8503   361  AGGGACCACGGTCCCCGTCTCCTCA  385
J  95.9% (47/49)    IGHJ6*02     38   .............A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40288536


Query= Query_277779

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*02                                                                                            364     6e-103
IGHD1-1*01                                                                                            12.2    37    
IGHJ6*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*02	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCATCGG	TGGAAC	CGACCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGGTCATCGGTGGAACCGACCTTACTATTACGCTTTGGACTTC	VRGHRWNRPYYYALDF	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	71	4	0	94.7
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	46	5	0	90.2
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	102	12	0	89.5
CDR3-IMGT (germline)	292	298	7	5	2	0	71.4
Total	N/A	N/A	295	264	31	0	89.5


Alignments

                                     <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_8504  4    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  93
V  89.5% (264/295)  IGHV1-2*02  1    .....G.................G.....................G....A...........................TA........C.  90
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                     GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                      S  Y  S  I  I  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  L  N  P  N  N  G  A  T  N  Y 
                    Query_8504  94   AGCTACTCTATCATCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGCCTCAACCCTAACAATGGTGCCACAAACTAT  183
V  89.5% (264/295)  IGHV1-2*02  91   G......A...GCA...........................................T.GA............G.....G..........  180
                                      G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                     -----------------------------------------------FR3-IMGT-----------------------------------
                                      A  Q  K  F  Q  G  R  I  T  L  T  S  D  T  S  I  S  K  A  Y  M  E  L  S  R  L  T  S  D  D 
                    Query_8504  184  GCACAGAAATTTCAGGGCAGGATCACGTTGACCAGTGACACGTCCATCAGTAAAGCCTACATGGAGCTGAGTAGGCTGACATCTGACGAC  273
V  89.5% (264/295)  IGHV1-2*02  181  ........G............G....CA.......G..............C.C..................C.......G..........  270
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                     -----------------><-------------------CDR3-IMGT------------------>                        
                                      T  A  V  F  F  C  V  R  G  H  R  W  N  R  P  Y  Y  Y  A  L  D  F  W  G  R  G  T  T  V  T 
                    Query_8504  274  ACGGCCGTATTTTTCTGTGTGCGAGGTCATCGGTGGAACCGACCTTACTATTACGCTTTGGACTTCTGGGGCCGAGGGACCACGGTCACC  363
V  89.5% (264/295)  IGHV1-2*02  271  ........G.A..A.....C.A...-----------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD1-1*01  9    ---------------------------------......---------------------------------------------------  14
J  90.7% (49/54)    IGHJ6*02    9    ---------------------------------------------.....C....G.A.....G.........A................  53

                                              
                                      V  S  S 
                    Query_8504  364  GTCTCCTCA  372
J  90.7% (49/54)    IGHJ6*02    54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_160945

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     2e-87
IGHD4-4*01                                                                                            21.8    0.042
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-4*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAGGCGGGG	GACTACAGTAA	TTGGGGGGGGCTGGACTACCCAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAGGCGGGGGACTACAGTAATTGGGGGGGGCTGGACTACCCAGACTACGGTATGGACGTC	AKDKAGDYSNWGGLDYPDYGMDV	230	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	46	5	0	90.2
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	114	0	0	100
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	212	12	0	94.6


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  V  T  L  T  T  Y  A  M  S  W  V  R  L  G  P  G  K  R  L  E  W  V  S  G  I  S  G  N 
                    Query_8505   14   TCTGGAGTCACTCTTACCACCTATGCCATGAGCTGGGTCCGCCTGGGTCCAGGGAAGCGGCTGGAATGGGTCTCAGGTATTAGTGGTAAT  103
V  94.6% (212/224)  IGHV3-23*01  73   ......T....CT...G..G.......................A..C..........G.......G..........C...........G.  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  V  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 
                    Query_8505   104  GGTGTTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAAC  193
V  94.6% (212/224)  IGHV3-23*01  163  ....G.....................................................................................  252
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><-----------------------------CDR3-IMGT---------------
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  K  A  G  D  Y  S  N  W  G  G  L  D  Y  P  D 
                    Query_8505   194  AGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATAAGGCGGGGGACTACAGTAATTGGGGGGGGCTGGACTACCCAGAC  283
V  94.6% (212/224)  IGHV3-23*01  253  ............................................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  100.0% (11/11)   IGHD4-4*01   2    ------------------------------------------------------...........-------------------------  12
J  100.0% (50/50)   IGHJ6*02     13   ----------------------------------------------------------------------------------------..  14

                                      -------------->                                 
                                       Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8505   284  TACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  331
J  100.0% (50/50)   IGHJ6*02     15   ................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_160628

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD6-13*01                                                                                           14.1    10    
IGHJ4*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CCGCG	GCAACACCTGGTA	TCGAGATTCTCAGGCCGGCAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACCGCGGCAACACCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGAC	ARHRGNTWYRDSQAGIYFDD	291	350	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	73	1	0	98.6
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	103	11	0	90.4
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	295	280	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  G  
                    Query_8506   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCCCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCG  93
V  94.9% (280/295)  IGHV5-51*01  2    .................................................T....................................AC.A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      G  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_8506   94   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  183
V  94.9% (280/295)  IGHV5-51*01  92   ..........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  Q  G  Q  V  T  I  S  V  D  R  S  L  G  T  A  Y  L  Q  W  P  S  L  K  A  S  D  
                    Query_8506   184  ACCCGTCCTTTCAAGGACAGGTCACCATCTCAGTCGACAGGTCCCTCGGAACCGCCTACCTGCAGTGGCCCAGCCTGAAGGCCTCGGACA  273
V  94.9% (280/295)  IGHV5-51*01  182  G.........C.....C................C.....A....A..A.C..................AG....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------------CDR3-IMGT------------------------>             
                                      T  A  M  Y  Y  C  A  R  H  R  G  N  T  W  Y  R  D  S  Q  A  G  I  Y  F  D  D  W  G  Q  G  
                    Query_8506   274  CCGCCATGTACTACTGTGCGAGACACCGCGGCAACACCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGACTGGGGCCAGGGAA  363
V  94.9% (280/295)  IGHV5-51*01  272  ..........T..............-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  84.6% (11/13)    IGHD6-13*01  8    ------------------------------...G..G......-----------------------------------------------  20
J  95.7% (45/47)    IGHJ4*02     2    ----------------------------------------------------------------......T...T...............  27

                                                           
                                      T  L  V  T  V  S  S  
                    Query_8506   364  CCCTGGTCACCGTCTCCTCAG  384
J  95.7% (45/47)    IGHJ4*02     28   .....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_160629

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           371     6e-105
IGHD3-9*01                                                                                            14.1    8.4   
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-9*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCTACG	TTTTGGCTGG	GAGAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTACGTTTTGGCTGGGAGAATGATGCACTTGATATC	ARHLRFGWENDALDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_8507   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  97.2% (244/251)  IGHV4-39*01  49   .........................................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8507   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACGACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCCGTTGACACGTCC  180
V  97.2% (244/251)  IGHV4-39*01  139  ..........................................T...............................A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  R  F  G  W  E 
                    Query_8507   181  AAGAATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGACATCTACGTTTTGGCTGGGAG  270
V  97.2% (244/251)  IGHV4-39*01  229  .....C.............A.......................................C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-9*01   12   -----------------------------------------------------------------------------.....A....---  21

                                      ----------------->                                  
                                       N  D  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8507   271  AATGATGCACTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  96.0% (48/50)    IGHJ3*02     1    --......TT..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_160623

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           266     2e-73
IGHD2-2*01                                                                                            18.0    0.58 
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	ACG	AGTAGTGCCAGC	CCTTACTCCCACCT	CGGCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAACGAGTAGTGCCAGCCCTTACTCCCACCTCGGCATGGACGTC	VRTSSASPYSHLGMDV	237	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	19	5	0	79.2
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	19	5	0	79.2
FR3-IMGT	123	236	114	98	16	0	86
CDR3-IMGT (germline)	237	242	6	5	1	0	83.3
Total	N/A	N/A	230	200	30	0	87


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  D  S  F  A  M  H  W  V  R  Q  A  P  D  R  G  L  E  W  V  A  V  I  
                    Query_8508   13   GTGCAGCCTCTGGATTCACCTTCGACAGCTTTGCGATGCACTGGGTCCGCCAGGCTCCCGACAGGGGGCTGGAGTGGGTGGCAGTTATTT  102
V  87.0% (200/230)  IGHV3-30*04  65   .......................AGT....A...T.......................A.G..A........................A.  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  Y  D  G  S  P  Q  F  Y  A  D  S  V  K  G  R  F  S  V  S  R  D  N  S  A  N  T  V  S  L  
                    Query_8508   103  CATATGATGGAAGTCCTCAGTTTTACGCAGACTCCGTGAAGGGCCGCTTCAGCGTCTCCAGAGACAATTCCGCGAACACGGTGTCTCTGC  192
V  87.0% (200/230)  IGHV3-30*04  155  ..............AA.A.A.AC.......................A....C.A.................AA.......C...A.....  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  N  D  L  R  R  E  D  S  G  V  Y  Y  C  V  R  T  S  S  A  S  P  Y  S  H  L  G  M  D  
                    Query_8508   193  AAATGAACGACCTGAGACGTGAGGACTCGGGTGTTTATTACTGTGTGAGAACGAGTAGTGCCAGCCCTTACTCCCACCTCGGCATGGACG  282
V  87.0% (200/230)  IGHV3-30*04  245  ........AG.......GC.......A...C...G..........C....----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  91.7% (11/12)    IGHD2-2*01   11   -----------------------------------------------------......A.....-------------------------  22
J  92.9% (39/42)    IGHJ6*02     17   -------------------------------------------------------------------------------...T.......  27

                                      ->                             
                                      V  W  G  Q  G  T  P  V  T  V  S
                    Query_8508   283  TCTGGGGCCAGGGGACCCCGGTCACCGTCTC  313
J  92.9% (39/42)    IGHJ6*02     28   ..........A......A.............  58


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_160621

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           282     4e-78
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GTTCTCC	ATTGTAGTAGTTCCAG	TCCCGGATGAAA	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGTTCTCCATTGTAGTAGTTCCAGTCCCGGATGAAAACTCCTACGGAATGGACGTC	AKEFSIVVVPVPDENSYGMDV	230	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	46	5	0	90.2
CDR2-IMGT	92	115	24	19	5	0	79.2
FR3-IMGT	116	229	114	105	9	0	92.1
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	202	22	0	90.2


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  T  T  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  S  V  T  G  T 
                    Query_8509   14   TCTGGATTCACCTTTACCACCCATGCCATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGGAGTGGGTCGCAAGCGTTACTGGTACT  103
V  90.2% (202/224)  IGHV3-23*01  73   ................G..G.T...............................G..................T..GCTA...G.....G.  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  K  N  I  L  F  L  Q  M  N 
                    Query_8509   104  GGAGGCAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACCCCAAGAACATCCTGTTTCTACAGATGAAC  193
V  90.2% (202/224)  IGHV3-23*01  163  ..T..T.....................................................TT.........CG....A...G..A......  252
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><--------------------------CDR3-IMGT------------------
                                       S  P  R  A  E  D  T  A  V  Y  Y  C  A  K  E  F  S  I  V  V  V  P  V  P  D  E  N  S  Y  G 
                    Query_8509   194  AGCCCGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAAGAGTTCTCCATTGTAGTAGTTCCAGTCCCGGATGAAAACTCCTACGGA  283
V  90.2% (202/224)  IGHV3-23*01  253  ....T.....................A.................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  93.8% (15/16)    IGHD2-2*01   6    ---------------------------------------------------...........A....-----------------------  21
J  92.5% (49/53)    IGHJ6*02     10   -------------------------------------------------------------------------------...A......T  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  A  S 
                    Query_8509   284  ATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCGCCTCA  325
J  92.5% (49/53)    IGHJ6*02     21   .................A..................T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_160626

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            296     2e-82
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCATCTTTCAA	CAGCAGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCATCTTTCAACAGCAGGTACTCGGGGTTTTGACTAC	ASHLSTAGTRGFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	17	4	0	81
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	218	29	0	88.3


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  D  V  S  V  G  S  I  T  S  A  N  W  W  S  W  V  R  Q  P  P  G  R  G  
                    Query_8510   1    GGTCCCTGAGACTCTCCTGCGATGTCTCTGTTGGCTCCATCACCAGTGCTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAGGGGAC  90
V  88.3% (218/247)  IGHV4-4*01   47   ..A.....TCC...A......C........G...........G....AG...................................A...G.  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  G  G  K  S  N  Y  S  P  S  L  R  G  R  V  T  I  S  V  D  K  S  
                    Query_8510   91   TGGAGTGGATTGGGGAAATCTATCATGGTGGGAAGTCCAACTACAGTCCGTCCCTCAGGGGTCGCGTCACCATTTCAGTGGACAAGTCCA  180
V  88.3% (218/247)  IGHV4-4*01   137  ..........................A......GCA.........AC..........A.A....A........A.....A..........  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      M  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  S  H  L  S  T  A  G  T  
                    Query_8510   181  TGAACCAGTTCTCCCTGAAGCTGAATTCTGTGACCGCCGCGGACACGGCCGTATACTTCTGTGCGAGCCATCTTTCAACAGCAGGTACTC  270
V  88.3% (218/247)  IGHV4-4*01   227  A.......................GC..........................G..T.G.........-----------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                          
D  90.0% (9/10)     IGHD6-13*01  12   ------------------------------------------------------------------------------....T.....--  21

                                      ------------->                                  
                                      R  G  F  D  Y  W  G  Q  G  A  L  V  S  V  S  S  
                    Query_8510   271  GGGGTTTTGACTACTGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  318
J  95.3% (41/43)    IGHJ4*02     6    -----.....................A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_160627

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           299     2e-83
IGHD6-13*01                                                                                           27.6    7e-04
IGHJ2*01                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GACGAG	ATAGCAGCAGCTGG	CTTC	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAGATAGCAGCAGCTGGCTTCGGTACTTCGATCTC	ARRDSSSWLRYFDL	239	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	20	4	0	83.3
FR2-IMGT	50	100	51	45	6	0	88.2
CDR2-IMGT	101	124	24	21	3	0	87.5
FR3-IMGT	125	238	114	108	6	0	94.7
CDR3-IMGT (germline)	239	242	4	4	0	0	100
Total	N/A	N/A	229	210	19	0	91.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  N  T  Y  A  M  N  W  V  R  H  T  P  G  K  G  L  D  W  V  S  S  I 
                    Query_8511   14   TGTGCAGCCTCTGGATTCACTTTTAATACCTATGCCATGAACTGGGTCCGCCACACTCCAGGGAAGGGACTGGATTGGGTCTCATCTATT  103
V  91.7% (210/229)  IGHV3-23*01  64   ....................C....GC.G...........G............GG.............G.....G.........G.....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  D  S  G  S  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_8511   104  AGTGATAGTGGTAGTGGCACATACTACGCAGACTCCGTGAAGGGCCGATTTACCATCTCCAGAGACAATTCCAAGAACACCCTGTATCTG  193
V  91.7% (210/229)  IGHV3-23*01  154  ....G.......G..A...............................G..C.............................G.........  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><----------------CDR3-IMGT--------------->   
                                       *  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  R  D  S  S  S  W  L  R  Y  F  D  L  W 
                    Query_8511   194  TAAATGAACAGCCTGAGAGCCGACGACACGGCCGTCTATTACTGTGCGAGACGAGATAGCAGCAGCTGGCTTCGGTACTTCGATCTCTGG  283
V  91.7% (210/229)  IGHV3-23*01  244  C......................G...........A.............-----------------------------------------  292
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  100.0% (14/14)   IGHD6-13*01  5    -------------------------------------------------------..............---------------------  18
J  100.0% (48/48)   IGHJ2*01     6    -------------------------------------------------------------------------.................  22

                                                                     
                                       G  R  G  T  L  V  T  V  S  S  
                    Query_8511   284  GGCCGTGGCACCCTGGTCACTGTCTCCTCAG  314
J  100.0% (48/48)   IGHJ2*01     23   ...............................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_160625

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           335     4e-94
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
Total	N/A	N/A	242	228	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8512   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.2% (228/242)  IGHV3-33*03  47   .....................................C..C.....C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  F  R  D  D  S  
                    Query_8512   91   AGTGGGTGGCAGTTATATGGTATGATGGAATTAAGAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTTCAGAGACGACTCCA  180
V  94.2% (228/242)  IGHV3-33*03  137  ..............................G...T........................................C.......A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_8512   181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCG  270
V  94.2% (228/242)  IGHV3-33*03  227  .......G....A......A..............................G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  90.9% (10/11)    IGHD6-13*01  7    -------------------------------------------------------------------....G......------------  17
J  97.8% (45/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_8512   271  ACCCCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  309
J  97.8% (45/46)    IGHJ5*02     13   .....................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_32973

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            277     8e-77
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GAATGAACCCTGAATT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATGAACCCTGAATTC	ARGMNPEF	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	41	10	0	80.4
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	213	36	0	85.5


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  I  F  R  G  H  W  M  T  W  I  R  H  L  P  D  K  G  L  
                    Query_8513  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTCGTGGCCACTGGATGACCTGGATTCGCCACCTTCCAGATAAGGGGCTGC  90
V  85.5% (213/249)  IGHV3-7*01  47   ....................................C....A..A..T.T.......G....G.C.....GGC.....GG.........G  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     Q  W  V  A  N  I  N  E  D  G  S  E  E  H  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8513  91   AGTGGGTGGCCAATATAAACGAAGATGGAAGTGAAGAGCACTATGGTGACTCTGTGAAGGGCCGATTCACCATCTCCCGAGACAACGCCC  180
V  85.5% (213/249)  IGHV3-7*01  137  .............C.....GC.............GA.AT......TG..............................A...........A  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                     Q  N  S  L  V  L  Q  M  N  N  L  R  V  E  D  T  S  V  Y  Y  C  A  R  G  M  N  P  E  F  W  
                    Query_8513  181  AGAACTCTCTCGTTTTGCAAATGAACAACCTGAGAGTCGAAGACACTTCTGTATATTACTGTGCGAGAGGAATGAACCCTGAATTCTGGG  270
V  85.5% (213/249)  IGHV3-7*01  227  .......A..GTA.C............G........C...G.....GG....G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  94.3% (33/35)    IGHJ4*02    14   -------------------------------------------------------------------------------------.....  18

                                                                   
                                     G  Q  G  T  L  V  I  V  S  S  
                    Query_8513  271  GCCAGGGAACCCTGGTCATCGTCTCGTCAG  300
J  94.3% (33/35)    IGHJ4*02    19   ..................C......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_32971

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           361     4e-102
IGHD2-2*01                                                                                            19.9    0.16  
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTGG	TATTGAAGTAGTA	GAAGGGGGCGAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTGGTATTGAAGTAGTAGAAGGGGGCGATTACTACTACTACGGTATGGACGTC	ARGGIEVVEGGDYYYYGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8514   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-48*03  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  N  T  K  Y  Y  A  G  S  V  E  G  R  F  T  I  S  R  D  S  A  
                    Query_8514   91   AGTGGGTTTCATACATTAGTAGTAGTGGTAATACCAAATACTACGCAGGCTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAGCGCCA  180
V  96.4% (240/249)  IGHV3-48*03  137  ..............................G.....T...........A.......A...........................A.....  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  D  S  L  F  L  H  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  I  E  V  V  E  
                    Query_8514   181  AGGACTCACTGTTTCTGCATATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTACTACTGTGCGAGAGGTGGTATTGAAGTAGTAGAAG  270
V  96.4% (240/249)  IGHV3-48*03  227  ..A.........A......A...................................T.............---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD2-2*01   5    -------------------------------------------------------------------------.....T.......----  17

                                      R3-IMGT------------------------>                                 
                                      G  G  D  Y  Y  Y  Y  G  M  D  V  W  G  L  G  T  T  V  T  V  S  S 
                    Query_8514   271  GGGGCGATTACTACTACTACGGTATGGACGTCTGGGGCCTAGGGACCACGGTCACCGTCTCCTCA  335
J  98.2% (56/57)    IGHJ6*02     6    --------...............................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_37118

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           319     2e-89
IGHD5-12*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	T	TGGTTACGAT	CGATTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTTGGTTACGATCGATTCCTTGACAAC	ARVGYDRFLDN	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  N  D  G  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  R 
                    Query_8515   1    ACCCTGTCCCTCACCTGCACTGTCTCGGGTGGCTCCGTCAACGATGGTAATTATTACTGGAGCTGGATCCGACAGCCCCCAGGGAAGAGA  90
V  90.8% (227/250)  IGHV4-61*01  49   ..........................T.............G.AG.....G...C.................G...............G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  F  I  Y  Y  T  G  S  T  T  D  N  P  S  L  K  S  R  V  T  M  S  V  D  T  P 
                    Query_8515   91   CTGGAGTGGATGGGGTTTATCTATTACACTGGGAGCACCACCGACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGCCC  180
V  90.8% (227/250)  IGHV4-61*01  139  ...........T....A...........G...........A.T...............................A.....A......T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  R  L  W  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  V  G  Y  D  R  F  L 
                    Query_8515   181  AAGAACCAGTTCTCCCTGCGGCTATGGTCTGTGACCTCTGCGGACACGGCCGTGTATTACTGTGCCAGAGTTGGTTACGATCGATTCCTT  270
V  90.8% (227/250)  IGHV4-61*01  229  ..................AA...GA.C.........G............................G....--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD5-12*01  11   -----------------------------------------------------------------------...C......---------  20
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8515   271  GACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  97.6% (41/42)    IGHJ4*02     9    ...T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_32974

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           372     2e-105
IGHD6-19*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAGGGTGGGGCCGA	TATGGCAGTGGCTGG	AACCCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAGGGTGGGGCCGATATGGCAGTGGCTGGAACCCGTTTGATTAC	ARDRGWGRYGSGWNPFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8516   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.6% (244/250)  IGHV3-30*03  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  T  I  I  S  Y  D  G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8516   91   AGTGGGTGACAATTATATCATATGATGGAAGTAATAAATTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  97.6% (244/250)  IGHV3-30*03  137  ........G..G...........................A..................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  G  W  G  R  Y  
                    Query_8516   181  AGAACACGCTATATCTGCAAATGCACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGATAGAGGGTGGGGCCGATATG  270
V  97.6% (244/250)  IGHV3-30*03  227  ..........G............A..............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD6-19*01  4    --------------------------------------------------------------------------------------...A  7

                                      IMGT--------------------->                                  
                                      G  S  G  W  N  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8516   271  GCAGTGGCTGGAACCCGTTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  93.3% (14/15)    IGHD6-19*01  8    ...........-------------------------------------------------  18
J  97.7% (42/43)    IGHJ4*02     6    -----------------.....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_32979

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           347     7e-98
IGHD3-3*01                                                                                            10.3    123  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTCTTC	TTTTT	CTCCAAGAGAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTCTTCTTTTTCTCCAAGAGAGAGTCTACTACTTTGACTAC	ARSLLFLQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  K  S  G  G  Y  Y  W  S  W  V  R  Q  H  P  G  K  G 
                    Query_8517   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAAGAGTGGTGGCTACTACTGGAGCTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (235/248)  IGHV4-31*03  49   ..................................C.....GC........T...............A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  A  T  S 
                    Query_8517   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGCCACGTCT  180
V  94.8% (235/248)  IGHV4-31*03  139  ..................................G.............C......................C........A.A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  S  L  L  F  L  Q  E 
                    Query_8517   181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACTGTCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTCTTCTTTTTCTCCAAGAG  270
V  94.8% (235/248)  IGHV4-31*03  229  .....................C....C..........C..............................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD3-3*01   10   ----------------------------------------------------------------------------.....---------  14

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8517   271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_160940

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            372     2e-105
IGHD3-16*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCAGGGGAGTGGTATACA	TATGATTACGTTTGGGGGAGT	AACCGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACCAGGGGAGTGGTATACATATGATTACGTTTGGGGGAGTAACCGCCTTTGACTAC	AKDQGSGIHMITFGGVTAFDY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8518   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  97.6% (244/250)  IGHV3-9*01   47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  L  N  W  N  S  A  N  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8518   91   AGTGGGTCTCAGGTCTTAATTGGAATAGTGCTAACATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (244/250)  IGHV3-9*01   137  ..............A...G...........G..G........................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  Q  G  S  G  I  H  
                    Query_8518   181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCCTGTATTACTGTGCAAAAGACCAGGGGAGTGGTATACATA  270
V  97.6% (244/250)  IGHV3-9*01   227  ..........G.......................................T...................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (21/21)   IGHD3-16*01  5    ----------------------------------------------------------------------------------------..  6

                                      DR3-IMGT-------------------------->                                  
                                      M  I  T  F  G  G  V  T  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8518   271  TGATTACGTTTGGGGGAGTAACCGCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  100.0% (21/21)   IGHD3-16*01  7    ...................--------------------------------------------------  25
J  100.0% (44/44)   IGHJ4*02     5    -------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_221711

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           363     1e-102
IGHD1-1*01                                                                                            12.2    31    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAACCTTTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCCCTAC	AEEKRRVPRGTFPY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  T  Y  A  M  S  W  G  R  Q  A  P  G  K  G  L  
                    Query_8519   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCATGAGCTGGGGCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-23*01  47   ................................T.........G..G.................T..........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  
                    Query_8519   91   AGTGGGTCTCAGCCATTAGTGGTGGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGA  180
V  96.4% (241/250)  IGHV3-23*01  137  .............T.........A......................................................G.........C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  
                    Query_8519   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGG  270
V  96.4% (241/250)  IGHV3-23*01  227  .................................................................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------------------------......------------  17

                                      ------------->                                  
                                      G  T  F  P  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8519   271  GAACCTTTCCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (38/38)   IGHJ4*02     11   ----------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_221712

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           389     2e-110
IGHD3-10*01                                                                                           19.9    0.18  
IGHJ2*01                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGTT	TTACTATGGCTCG	CCCGTAGT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGTTTTACTATGGCTCGCCCGTAGTCTGGTACTTCGACCTC	ARDRFYYGSPVVWYFDL	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	270	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  T  F  S  D  Y
                    Query_8520   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAGCGACTA  90
V  92.8% (270/291)  IGHV1-69*01  6    ..................G.......................................................G..........AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  Q  I  V  P  V  F  G  T  T  T  Y  A  E
                    Query_8520   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACAGATCGTCCCTGTCTTTGGTACGACAACCTACGCAGA  180
V  92.8% (270/291)  IGHV1-69*01  96   ....................................................GG....A.....A..........AG...A.......C.  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        D  L  Q  G  R  V  K  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_8520   181  GGACTTACAGGGCAGAGTCAAAATCACCGCGGACGAATCCACTAGCACAGCCTACATGGAGCTGAGTAGCCTGAGATCTGAGGACACGGC  270
V  92.8% (270/291)  IGHV1-69*01  186  .A.G..C.............CG..T.................G.......................C.......................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  D  R  F  Y  Y  G  S  P  V  V  W  Y  F  D  L  W  G  R  G  P  L  V  T  V
                    Query_8520   271  CGTCTATTACTGTGCGAGAGATCGGTTTTACTATGGCTCGCCCGTAGTCTGGTACTTCGACCTCTGGGGCCGTGGCCCCCTGGTCACTGT  360
V  92.8% (270/291)  IGHV1-69*01  276  ...G.................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  92.3% (12/13)    IGHD3-10*01  4    ---------------------------.........T...--------------------------------------------------  16
J  96.0% (48/50)    IGHJ2*01     4    ------------------------------------------------............T...............A.............  45

                                              
                                        S  S  
                    Query_8520   361  CTCCTCAG  368
J  96.0% (48/50)    IGHJ2*01     46   ........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_221713

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           327     9e-92
IGHD6-6*01                                                                                            19.9    0.15 
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-6*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCC	AGTATAGAAGATCGTC	GGCTGGT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCAGTATAGAAGATCGTCGGCTGGTTGCTTTTGATATC	ARPSIEDRRLVAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  R  G  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  Q 
                    Query_8521   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGGGGTTACTACTGGAGCTGGGTCCGTCAGCCCCCAGGGAAGGGGCTGCAG  90
V  93.0% (226/243)  IGHV4-34*01  49   .........................................T..................A....C.....................G..  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  I  N  H  R  G  S  S  Y  H  S  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_8521   91   TGGCTTGGCGAAATCAACCATAGAGGAAGTAGCTATCACAGCCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGTCCAAGAAC  180
V  93.0% (226/243)  IGHV4-34*01  139  ...A....G........T.....T.....C.C.A.CT...A...........................A.....A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  S  I  E  D  R  R  L  V 
                    Query_8521   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGACCCAGTATAGAAGATCGTCGGCTGGTT  270
V  93.0% (226/243)  IGHV4-34*01  229  ...............................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (14/16)    IGHD6-6*01   2    ------------------------------------------------------------------.......C..C.....--------  17
J  100.0% (47/47)   IGHJ3*02     4    -----------------------------------------------------------------------------------------.  4

                                      ----------->                                  
                                       A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8521   271  GCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  316
J  100.0% (47/47)   IGHJ3*02     5    ..............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_221714

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           321     7e-90
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTGCCTTCGGTCCGA	ATAGCAGT	TGACAGGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGCCTTCGGTCCGAATAGCAGTTGACAGGGGCTACTCCGGCATGGACGTC	ARLPSVRIAVDRGYSGMDV	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  L  N  S  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8522   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGACTCCTTGAATAGTTACTTCTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.2% (224/243)  IGHV4-59*01  49   .............................T.G....A.C.G........A.....G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  D  S  E  T  T  K  Y  N  P  S  L  R  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_8522   91   TGGATTGGCTATATCTATGACAGTGAGACCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  92.2% (224/243)  IGHV4-59*01  139  ........G.........T......G..G......C................A....................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  T  V  T  S  V  T  P  A  D  T  A  V  Y  F  C  A  R  L  P  S  V  R  I  A  V  D 
                    Query_8522   181  CAGTTCTCCCTGACGGTGACCTCTGTGACCCCTGCGGACACGGCCGTGTATTTCTGTGCGAGATTGCCTTCGGTCCGAATAGCAGTTGAC  270
V  92.2% (224/243)  IGHV4-59*01  229  .............A.C...G..........G.....................A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  5    ------------------------------------------------------------------------------........----  12

                                      ----------------------->                                 
                                       R  G  Y  S  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8522   271  AGGGGCTACTCCGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  327
J  96.2% (50/52)    IGHJ6*02     11   -----.....A...T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_221715

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           377     8e-107
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	242	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8523   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.6% (242/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8523   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  99.6% (242/243)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_8523   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  99.6% (242/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8523   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_221716

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            291     5e-81
IGHD3-10*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGGGACTCAAC	TGGTTCGGGGA	C	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGGGACTCAACTGGTTCGGGGACCTTTGACTAC	ARLRDSTGSGTFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	217	31	0	87.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  E  F  S  L  R  S  Y  W  M  S  W  I  R  Q  T  P  G  K  G  L  
                    Query_8524   1    GGTCCCTGAGACTCTCCTGTGTGGCCTCTGAATTCAGTCTTAGGAGTTACTGGATGTCCTGGATCCGCCAGACTCCAGGGAAGGGACTGG  90
V  87.5% (217/248)  IGHV3-7*03   47   .....................CA.......G.....CCT....T..C..T......AG....G........G.............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  H  S  W  P  G  G  N  E  A  Q  Y  L  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_8524   91   AGTGGGTGGCCCACAGTTGGCCAGGTGGAAATGAGGCACAGTATCTGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  87.5% (217/248)  IGHV3-7*03   137  ...........A...TAAA..A..A.....G....AA.T.C...G............A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  F  C  A  R  L  R  D  S  T  G  S  
                    Query_8524   181  AGAACACACTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCCGTGTATTTCTGTGCGAGACTTCGGGACTCAACTGGTTCGG  270
V  87.5% (217/248)  IGHV3-7*03   227  .....T..........................A........................A..........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-10*01  10   ----------------------------------------------------------------------------------........  17

                                      ------------->                                
                                      G  T  F  D  Y  W  G  Q  G  T  L  V  T  V  T  S
                    Query_8524   271  GGACCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCACCTC  316
D  100.0% (11/11)   IGHD3-10*01  18   ...-------------------------------------------  20
J  97.6% (41/42)    IGHJ4*02     5    ----.....................................T....  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_37117

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           302     3e-84
IGHD2-15*01                                                                                           12.2    31   
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCGACCGT	CTACTC	N/A	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCGACCGTCTACTCCAACTGGTTCAACCCC	ARHPTVYSNWFNP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	219	26	0	89.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8525   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATAATTACTACTGGAGTTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  89.4% (219/245)  IGHV4-59*08  49   ...............................G........G..G............C....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  Y  S  D  G  Y  T  T  Y  N  P  S  L  K  S  R  L  T  I  S  Q  D  T  S  K  S 
                    Query_8525   91   TGGCTTGGCTATATCTACTCCGATGGATACACCACTTACAACCCCTCCCTCAAGAGTCGACTTACCATTTCACAAGACACGTCCAAGAGC  180
V  89.4% (219/245)  IGHV4-59*08  139  ...A....G........T.A.AG...GAG.....AC........................G.C.....A...GT..............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  T  V  Y  S  N  W  F 
                    Query_8525   181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCCGCAGACACGGCCGTCTACTACTGTGCGAGACATCCGACCGTCTACTCCAACTGGTTC  270
V  89.4% (219/245)  IGHV4-59*08  229  ...................GC..........................G..T..............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-15*01  25   --------------------------------------------------------------------------......----------  30
J  93.9% (46/49)    IGHJ5*02     2    --------------------------------------------------------------------------------..........  11

                                      ----->                                 
                                       N  P  W  G  P  G  T  L  V  A  V  S  S 
                    Query_8525   271  AACCCCTGGGGCCCGGGAACCCTGGTCGCCGTCTCCTCA  309
J  93.9% (46/49)    IGHJ5*02     12   G............A.............A...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_221719

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           366     2e-103
IGHD2-15*01                                                                                           14.1    9.2   
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCACGTGG	GGATATT	TAGATAAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGATATTTAGATAAG	ARDLTWGYLDK	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	262	28	0	90.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  P  E  V  K  Q  P  G  A  S  V  K  V  S  C  R  A  S  G  Y  T  F  T  T  F 
                    Query_8526   2    CAGCTGGTGCAGTCTGGACCTGAGGTGAAGCAGCCTGGGGCCTCAGTTAAGGTCTCCTGCAGGGCTTCTGGGTACACCTTTACCACCTTT  91
V  90.3% (262/290)  IGHV1-18*01  7    ..................G...........A................G.............A.........T.............G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  L  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  S  G  D  T  K  Y  A  Q 
                    Query_8526   92   GGCATCAACTGGCTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAGTGGTGACACAAAGTACGCACAG  181
V  90.3% (262/290)  IGHV1-18*01  97   ..T....G....G......................................T......G.G......A....A.......C..T......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  V  Q  G  R  V  T  L  T  T  D  T  A  T  S  T  A  Y  M  D  L  K  S  L  R  S  D  D  T  A 
                    Query_8526   182  AAAGTCCAGGGCAGAGTCACCCTGACCACAGACACAGCCACGAGCACAGCCTACATGGACCTAAAGAGCCTAAGATCTGACGACACGGCC  271
V  90.3% (262/290)  IGHV1-18*01  187  ..GC.................A..............T......................G..G.G......G..................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       M  Y  F  C  A  R  D  L  T  W  G  Y  L  D  K  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_8526   272  ATGTATTTCTGCGCGAGAGATCTCACGTGGGGATATTTAGATAAGTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  350
V  90.3% (262/290)  IGHV1-18*01  277  G......A...T........-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (7/7)     IGHD2-15*01  2    ------------------------------.......------------------------------------------  8
J  97.1% (33/34)    IGHJ4*02     15   ---------------------------------------------............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_97916

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           427     1e-121
IGHD1-1*01                                                                                            10.3    138   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGTTCAG	CAACT	CCCGGGGGGGTCCCCGTCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGTTCAGCAACTCCCGGGGGGGTCCCCGTCTCCCTGACTCC	ARDLFSNSRGGPRLPDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	282	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  Q  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_8527   1    GCAGCTGGTGCAGTCTGGAGCTCAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGTTA  90
V  96.9% (282/291)  IGHV1-46*01  6    ..................G...G................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  H  W  A  R  Q  A  P  R  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  T  Y  A  Q
                    Query_8527   91   CTATATACACTGGGCGCGACAGGCCCCTAGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAACCTACGCACA  180
V  96.9% (282/291)  IGHV1-46*01  96   ......G.......T.............G...................................................G.........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  K  S  E  D  T  A
                    Query_8527   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTGTACATGGAGCTGAGCAGCCTGAAATCTGAGGACACGGC  270
V  96.9% (282/291)  IGHV1-46*01  186  ...................................................C......................G...............  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  D  L  F  S  N  S  R  G  G  P  R  L  P  D  S  W  G  Q  G  T  L  V  T  V
                    Query_8527   271  CGTGTATTACTGTGCGAGAGATCTGTTCAGCAACTCCCGGGGGGGTCCCCGTCTCCCTGACTCCTGGGGCCAGGGAACCCTGGTCACCGT  360
V  96.9% (282/291)  IGHV1-46*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD1-1*01   5    ------------------------------.....-------------------------------------------------------  9
J  97.6% (40/41)    IGHJ4*02     8    ---------------------------------------------------------.....A...........................  40

                                              
                                        S  S  
                    Query_8527   361  CTCCTCAG  368
J  97.6% (40/41)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_32168

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           375     3e-106
IGHD3-3*01                                                                                            23.8    0.011 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACCGCCCCGCGAG	TTTTTGGAGTGG	GGCAGACCCT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACCGCCCCGCGAGTTTTTGGAGTGGGGCAGACCCTTACGGTATGGACGTC	ARYRPASFWSGADPYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	244	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  N  L  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8528   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAACTTGAACTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  98.4% (244/248)  IGHV3-21*01  47   ...................................................G.A...............................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8528   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAGTCACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (244/248)  IGHV3-21*01  137  ................................T.........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Y  R  P  A  S  F  W  
                    Query_8528   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGATACCGCCCCGCGAGTTTTTGGA  270
V  98.4% (244/248)  IGHV3-21*01  227  ....................................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD3-3*01   10   ----------------------------------------------------------------------------------........  17

                                      -IMGT----------------------->                                 
                                      S  G  A  D  P  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8528   271  GTGGGGCAGACCCTTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (12/12)   IGHD3-3*01   18   ....----------------------------------------------------------  21
J  100.0% (48/48)   IGHJ6*02     15   --------------................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_322451

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           329     3e-92
IGHD2-8*01                                                                                            12.2    31   
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TAATGG	CCCGACTGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGGCCCGACTGAACTACGGCATGGACGTC	ARLMARLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  L  T  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_8529   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCCTCACCAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCCGGGAAGGGACTGGAA  90
V  93.0% (227/244)  IGHV4-59*08  49   ..................A............G....A...GT..................A.............A..............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  R  P  N  N  N  P  S  L  R  S  R  V  T  I  S  V  D  A  S  K  N 
                    Query_8529   91   TGGATTGAGTATATCTATTACAGAGGGCGTCCCAACAACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACGCGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*08  139  .......G...............T...A.CA.....T...............A.........................A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  A  R  L  N  Y  G  M 
                    Query_8529   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACTAATGGCCCGACTGAACTACGGCATG  270
V  93.0% (227/244)  IGHV4-59*08  229  ...................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-8*01   13   ----------------------------------------------------------------......--------------------  18
J  94.0% (47/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_8529   271  GACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCGTCA  309
J  94.0% (47/50)    IGHJ6*02     24   .............A.....................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_322450

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           332     4e-93
IGHD3-22*01                                                                                           21.8    0.043
IGHJ4*01                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCGGAGGTGGGATGACGCGGACTACTCCTC	TGATACTAGTGGTT	TTCGACCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCGGAGGTGGGATGACGCGGACTACTCCTCTGATACTAGTGGTTTTCGACCT	ARGRRWDDADYSSDTSGFRP	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  N  S  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8530   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCCGGAACAGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  92.7% (230/248)  IGHV4-31*03  49   .......................................A.C.GTG............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  H  S  G  S  A  Y  Y  N  P  S  L  K  S  R  T  S  I  S  V  D  T  S 
                    Query_8530   91   CTGGAATGGATTGGCTACATCTATCACAGTGGGAGCGCCTACTACAACCCGTCCCTCAAGAGTCGAACTTCCATATCAGTAGACACGTCT  180
V  92.7% (230/248)  IGHV4-31*03  139  .....G........G.........T...........A.............................GT.A....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  W  D  D  A 
                    Query_8530   181  AAGAACCAGTTCTCTCTGATTCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGGGGCCGGAGGTGGGATGACGCG  270
V  92.7% (230/248)  IGHV4-31*03  229  ..............C....AG....GC.............................T...........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      DR3-IMGT------------------------>                                  
                                       D  Y  S  S  D  T  S  G  F  R  P  W  G  H  G  T  L  V  T  V  S  S  
                    Query_8530   271  GACTACTCCTCTGATACTAGTGGTTTTCGACCTTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  337
D  92.9% (13/14)    IGHD3-22*01  10   -----------.....G........------------------------------------------  23
J  97.1% (33/34)    IGHJ4*01     15   ---------------------------------........A.........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_96525

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            363     1e-102
IGHD3-22*01                                                                                           52.6    2e-11 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGACGGGGT	TATTACTATGATAATAGTGGTTATTACTAC	GGTCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACGGGGTTATTACTATGATAATAGTGGTTATTACTACGGTCTC	ARRRGYYYDNSGYYYGL	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  S  H  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_8531   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGTAGTCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  97.2% (239/246)  IGHV4-4*02   49   ...............................G................A.........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  N  S  K 
                    Query_8531   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAACACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAACTCCAAG  180
V  97.2% (239/246)  IGHV4-4*02   139  ...............................G...................................................G......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  R  R  G  Y  Y  Y  D  N 
                    Query_8531   181  AACCAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCCATATATTACTGTGCGAGACGACGGGGTTATTACTATGATAAT  270
V  97.2% (239/246)  IGHV4-4*02   229  .......................C........................G.G...............------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  96.7% (29/30)    IGHD3-22*01  2    ---------------------------------------------------------------------------.............G.  16

                                      -------------------->                                  
                                       S  G  Y  Y  Y  G  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8531   271  AGTGGTTATTACTACGGTCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  96.7% (29/30)    IGHD3-22*01  17   ...............----------------------------------------  31
J  100.0% (35/35)   IGHJ4*02     14   --------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_96522

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            377     1e-106
IGHD3-3*01                                                                                            18.0    0.66  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-3*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	CGGAAAGAGCGGACTCA	ATTTTTGGA	ATCATTGTGCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGCGGAAAGAGCGGACTCAATTTTTGGAATCATTGTGCCTTTTGACTGC	QSGKSGLNFWNHCAF*L	277	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	54	56	52	2	2	92.9
CDR1-IMGT	55	84	30	28	2	0	93.3
FR2-IMGT	85	135	51	51	0	0	100
CDR2-IMGT	136	162	27	25	2	0	92.6
FR3-IMGT	163	276	114	104	10	0	91.2
CDR3-IMGT (germline)	277	283	7	5	2	0	71.4
Total	N/A	N/A	285	265	18	2	93


Alignments

                                     <-----------------------FR1-IMGT-----------------------><----------CDR1-IMGT---------><---
                                        G  A    A  G  A  A  L  A  D  P  L  T  H  L  C  H  L  R  G  Q  C  L  *  R  P  C  C  L  E
                    Query_8532  1    CAGGTGCAG--CTGGTGCAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCGACCGTGCTGCTTGGA  88
V  93.0% (265/285)  IGHV6-1*01  20   .....C...GA......A........................................................A..A............  109
                                        G  P  G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  

                                     -----------------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------
                                       L  D  Q  A  V  P  I  E  R  P  *  V  A  G  K  D  I  L  Q  V  Q  V  V  L  *  L  C  S  I  C
                    Query_8532  89   ACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATATTACAGGTCCAAGTGGTATTATGATTATGCAGTATCTG  178
V  93.0% (265/285)  IGHV6-1*01  110  ....................................................C..................A..................  199
                                     N  W  I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  

                                     -------------------------------------FR3-IMGT---------------------------------------------
                                       K  E  S  N  D  H  Q  S  R  H  I  Q  E  P  I  F  P  A  V  E  V  C  D  S  R  R  H  G  C  L
                    Query_8532  179  TAAAGAGTCGAATGACCATCAATCCAGACACATCCAAGAACCAATTTTCCCTGCAGTTGAAGTCTGTGACTCCCGACGACACGGCTGTCT  268
V  93.0% (265/285)  IGHV6-1*01  200  .G..A........A........C....................G..C.........C....C..............G...........G.  289
                                     V  K  S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  

                                     -------><----------------------CDR3-IMGT--------------------->                            
                                       L  L  C  Q  S  G  K  S  G  L  N  F  W  N  H  C  A  F  *  L  L  G  P  G  N  P  G  H  R  L
                    Query_8532  269  ATTACTGTGTCAGAGCGGAAAGAGCGGACTCAATTTTTGGAATCATTGTGCCTTTTGACTGCTGGGACCAGGGAACCCTGGTCACCGTCT  358
V  93.0% (265/285)  IGHV6-1*01  290  .........CA....---------------------------------------------------------------------------  304
                                     Y  Y  C  A  R                                                                             
D  100.0% (9/9)     IGHD3-3*01  9    --------------------------------.........-------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02    6    -----------------------------------------------------.......A.....G.......................  42

                                           
                                       L   
                    Query_8532  359  CCTCAG  364
J  95.3% (41/43)    IGHJ4*02    43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_322454

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           371     7e-105
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	ARPSSASGWHFDN	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	263	26	0	91


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_8533   1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCAGTTA  90
V  91.0% (263/289)  IGHV5-51*03  6    .........................G.............G.........................G.........C.GC..T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  D  I  R  Y  S  P
                    Query_8533   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGATATTAGATATAGTCC  180
V  91.0% (263/289)  IGHV5-51*03  96   C.......G..................................................AT...GG...........CC.....C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  T  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  R  A  S  D  T  G
                    Query_8533   181  GTCCTTCCAAGGCCAGGTCACCACCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACACCGG  270
V  91.0% (263/289)  IGHV5-51*03  186  .......................T.....C..A.AA........G.............................A..............C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8533   271  CATGTATTACTGTGCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  91.0% (263/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_322457

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           254     9e-70
IGHD1-20*01                                                                                           10.3    114  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	GGGGGGGGGGGGGCCCC	GGTAT	N/A	TACGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGAGAGGGGGGGGGGGGGCCCCGGTATTACGCTATGGACGTC	GGEGGGGPRYYAMDV	223	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	11	12	2	2	0	0	100
CDR1-IMGT	13	36	24	17	7	0	70.8
FR2-IMGT	37	87	51	47	4	0	92.2
CDR2-IMGT	88	108	21	19	2	0	90.5
FR3-IMGT	109	222	114	100	14	0	87.7
CDR3-IMGT (germline)	223	230	8	6	2	0	75
Total	N/A	N/A	220	191	29	0	86.8


Alignments

                                        <-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-----CDR2-IM
                                         G  A  S  M  S  D  F  Y  W  S  W  L  R  Q  P  P  G  K  A  L  E  W  I  G  Y  I  Y  Y  T  
                    Query_8534   11   CTGGTGCTTCCATGAGTGACTTCTACTGGAGTTGGCTCCGGCAGCCCCCAGGGAAGGCACTGGAGTGGATTGGGTACATCTATTACACTG  100
V  86.8% (191/220)  IGHV4-59*01  74   ......GC.....C...AGT.A.........C...A.....................G..................T..........G..  163
                                         G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  

                                      GT-----><----------------------------------------------------FR3-IMGT---------------------
                                      G  S  T  N  H  N  P  S  L  R  N  R  V  T  I  S  V  D  R  S  K  N  E  F  S  L  K  L  T  S  
                    Query_8534   101  GGAGTACCAACCACAATCCCTCCCTCAGGAATCGAGTCACCATTTCAGTAGACAGGTCCAAGAACGAGTTCTCCCTGAAGTTGACTTCTG  190
V  86.8% (191/220)  IGHV4-59*01  164  ....C......T....C..........A..G............A..........C..........C..............C...GC....  253
                                      G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  

                                      -------------------------------><-----------------CDR3-IMGT----------------->             
                                      V  T  A  A  D  T  A  I  Y  F  C  G  G  E  G  G  G  G  P  R  Y  Y  A  M  D  V  W  G  Q  G  
                    Query_8534   191  TGACCGCTGCGGACACGGCCATATATTTTTGTGGGGGAGAGGGGGGGGGGGGGCCCCGGTATTACGCTATGGACGTCTGGGGCCAAGGGA  280
V  86.8% (191/220)  IGHV4-59*01  254  ....................G.G....AC....C.A....--------------------------------------------------  293
                                      V  T  A  A  D  T  A  V  Y  Y  C  A  R                                                     
D  100.0% (5/5)     IGHD1-20*01  1    ---------------------------------------------------------.....----------------------------  5
J  95.8% (46/48)    IGHJ6*02     15   --------------------------------------------------------------....G.......................  42

                                                          
                                      T  T  V  P  V  S  S 
                    Query_8534   281  CCACGGTCCCCGTCTCCTCA  300
J  95.8% (46/48)    IGHJ6*02     43   ........A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_96521

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           346     2e-97
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCG	ACGGTGAC	ACCGAGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACGGTGACACCGAGAATGACTAC	AADGDTENDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  S  F  G  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_8535   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGACTCACCTTCAGTAGCTTTGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGG  90
V  95.1% (233/245)  IGHV3-33*01  47   ................................T...............A......................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  K  K  Y  Y  T  D  S  V  K  G  R  F  I  I  S  R  D  N  S  
                    Query_8535   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAAGAAATACTATACAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCA  180
V  95.1% (233/245)  IGHV3-33*01  137  ..................................T.........G........................C....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  F  C  A  A  D  G  D  T  E  N  D  
                    Query_8535   181  AGAACACGTTGTATCTGCAGATGAACAGCCTGAGAGTCGACGACACGGCTGTCTATTTCTGTGCGGCCGACGGTGACACCGAGAATGACT  270
V  95.1% (233/245)  IGHV3-33*01  227  ........C..........A................C...G...........G....A.......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD4-17*01  6    ---------------------------------------------------------------------........-------------  13
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8535   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_322459

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           445     2e-127
IGHD3-3*01                                                                                            41.1    8e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACGCCT	CGATTTTTGGAGTGGTTATTGTAC	GAGAATCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTAC	ARYASIFGVVIVRESFDY	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	287	2	0	99.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_8536   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  99.3% (287/289)  IGHV5-51*01  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_8536   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACTAGATACAGCCC  180
V  99.3% (287/289)  IGHV5-51*01  96   ............................................................T.................C...........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8536   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  99.3% (287/289)  IGHV5-51*01  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  Y  A  S  I  F  G  V  V  I  V  R  E  S  F  D  Y  W  G  Q  G  T  L  V  T
                    Query_8536   271  CATGTATTACTGTGCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTACTGGGGCCAGGGAACCCTGGTCAC  360
V  99.3% (287/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  95.8% (23/24)    IGHD3-3*01   7    --------------------------....................A...----------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    ----------------------------------------------------------................................  37

                                                 
                                        V  S  S  
                    Query_8536   361  CGTCTCCTCAG  371
J  100.0% (43/43)   IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_97910

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           339     2e-95
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCGGACGAATA	ACTATGGTCCGGGGAGT	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGACATCGGACGAATAACTATGGTCCGGGGAGTCCCTTTGACTAC	SRHRTNNYGPGSPFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	234	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  S  T  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_8537   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTAGCACTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  93.2% (234/251)  IGHV4-39*01  49   ...............................G...............T.G...........G...........................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  P  G  G  S  T  Q  Y  I  P  S  L  K  S  R  L  T  M  S  V  D  S  S 
                    Query_8537   91   CTGGAGTGGATTGGGAGTATCTATCCTGGTGGGAGCACCCAGTACATCCCGTCCCTCAAGAGTCGACTCACCATGTCCGTAGACTCGTCC  180
V  93.2% (234/251)  IGHV4-39*01  139  ........................TA.A...........T.C....A...................G.......A.........A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  R  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  S  R  H  R  T  N  N  Y  G 
                    Query_8537   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGAGCGCCGCAGACACGGCTGTGTATTACTGTTCGAGACATCGGACGAATAACTATGGT  270
V  93.2% (234/251)  IGHV4-39*01  229  ...................A..............C............................G.......-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.1% (16/17)    IGHD3-10*01  6    ----------------------------------------------------------------------------------........  13

                                      GT------------------>                                  
                                       P  G  S  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8537   271  CCGGGGAGTCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  94.1% (16/17)    IGHD3-10*01  14   T........----------------------------------------------  22
J  100.0% (44/44)   IGHJ4*02     5    -----------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_96528

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           360     1e-101
IGHD2-2*01                                                                                            14.1    8.5   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTATCGACTGTACCAT	TACCACCTGC	CGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTATCGACTGTACCATTACCACCTGCCGTTTTGACTTC	ASLIDCTITTCRFDF	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  R  N  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_8538   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAACAGTCGTAATTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.4% (239/248)  IGHV4-39*01  49   ........................................G....A...G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  N  Y  S  G  T  T  Y  Y  T  A  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_8538   91   CTGGAGTGGATTGGGAGTATCAATTATAGTGGGACCACCTACTACACCGCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  96.4% (239/248)  IGHV4-39*01  139  .....................T............G...........A.C.........................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  I  D  C  T  I  T 
                    Query_8538   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGCCTTATCGACTGTACCATTACC  270
V  96.4% (239/248)  IGHV4-39*01  229  ...........................................................C........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.0% (9/10)     IGHD2-2*01   16   --------------------------------------------------------------------------------------....  19

                                      ----------------->                                  
                                       T  C  R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8538   271  ACCTGCCGTTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  90.0% (9/10)     IGHD2-2*01   20   .G....----------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_151102

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           367     5e-104
IGHD2-15*01                                                                                           10.3    116   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTC	GTAGC	GA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCGTAGCGAACAACTGGTTCGACCCC	ARLVANNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8539   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.2% (242/249)  IGHV4-31*03  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  V  G  S  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8539   91   CTGGAGTGGGTTGGGTCCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.2% (242/249)  IGHV4-31*03  139  .........A......A.................G.......................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  V  A  N  N  W  F 
                    Query_8539   181  AAGAACCAGTTCTCCCTGAAACTGAACTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGACTCGTAGCGAACAACTGGTTC  270
V  97.2% (242/249)  IGHV4-31*03  229  ....................G....G...........................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD2-15*01  18   ------------------------------------------------------------------------.....-------------  22
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8539   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_160949

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           330     1e-92
IGHD1-7*01                                                                                            18.0    0.58 
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCAGT	TGGAACTAC	GGCCTTGGTGCAG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCAGTTGGAACTACGGCCTTGGTGCAGTTTTGATATT	ARHQLELRPWCSFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	231	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  N  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_8540   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAATTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  92.0% (231/251)  IGHV4-39*01  49   .............................................A...G.......................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  T  G  L  T  Y  Y  T  P  S  L  G  S  R  L  T  I  S  V  D  T  S 
                    Query_8540   91   CTGGAGTGGATTGGGAGCATCTATTATACTGGGCTCACCTACTACACCCCGTCCCTCGGGAGTCGACTCACCATATCCGTGGACACGTCC  180
V  92.0% (231/251)  IGHV4-39*01  139  .................T..........G....AG...........A..........AA.......G.............A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  T  Q  F  S  L  S  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Q  L  E  L  R  P 
                    Query_8540   181  AGAACCCAGTTCTCCCTGAGCCTCAGCTCTGTGACCGCCGCAGATACGGCTGTATATTACTGTGCGAGACATCAGTTGGAACTACGGCCT  270
V  92.0% (231/251)  IGHV4-39*01  229  .AG.A..............AG..G....................C........G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD1-7*01   9    ----------------------------------------------------------------------------.........-----  17

                                      ----------------->                                  
                                       W  C  S  F  D  I  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_8540   271  TGGTGCAGTTTTGATATTTGGGGCCAAGGGACAAGGGTCACCGTCTCTTCAG  322
J  95.5% (42/44)    IGHJ3*02     7    --------.........C................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_160948

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           344     6e-97
IGHD2-15*01                                                                                           25.7    0.003
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGAGTTC	TTGTACTGGTGGGAGGTGCTAC	ATGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGAGTTCTTGTACTGGTGGGAGGTGCTACATGTTCTACTACTACGCTGTGGACGTC	AGSSCTGGRCYMFYYYAVDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  V  S  I  S  T  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_8541   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGTCTCCATCAGTACTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  94.7% (233/246)  IGHV4-39*01  49   ...................C...........G.........C.G..G..........................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  S  I  Y  H  S  G  S  A  F  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  T  P 
                    Query_8541   91   CTGGAGTGGATGGGGAGTATCTATCATAGTGGGAGCGCCTTCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCCGTAGACACGCCC  180
V  94.7% (233/246)  IGHV4-39*01  139  ...........T............T...........A...A................A................A............T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  C  T  G  G  R 
                    Query_8541   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGGGGAGTTCTTGTACTGGTGGGAGG  270
V  94.7% (233/246)  IGHV4-39*01  229  ..................................................................------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  86.4% (19/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G......T..C  22

                                      DR3-IMGT------------------------>                                 
                                       C  Y  M  F  Y  Y  Y  A  V  D  V  W  G  Q  E  T  T  I  T  V  S  S 
                    Query_8541   271  TGCTACATGTTCTACTACTACGCTGTGGACGTCTGGGGCCAAGAGACCACGATCACCGTCTCCTCA  336
D  86.4% (19/22)    IGHD2-15*01  23   ......------------------------------------------------------------  28
J  92.7% (51/55)    IGHJ6*02     8    -----------...........G.A..................G.......G..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_32169

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAATGGCGTG	GCAGTGGCT	AGAAGATTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAATGGCGTGGCAGTGGCTAGAAGATTTTTTGACTCC	ARDNGVAVARRFFDS	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  I  S  G  G  S  F  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  E  G  L  E 
                    Query_8542   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGGCTCCTTCAGTTCTTATTACTGGAGCTGGATTCGGCAGTCCCCAGGGGAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   .....................G..............A.....AG...C..............C......C........A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8542   91   TGGATTGGCTATGTCTACTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G...A....T..C.....................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  N  G  V  A  V  A  R  R 
                    Query_8542   181  CAGTTCTCCCTGAGGCTGACGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATAATGGCGTGGCAGTGGCTAGAAGA  270
V  93.5% (229/245)  IGHV4-59*01  229  .............A.....GC..........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-19*01  8    ---------------------------------------------------------------------------.........------  16

                                      ----------->                                  
                                       F  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_8542   271  TTTTTTGACTCCTGGGGCCAGGGAATCCTGGTCACCGTTTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.......A..............C............C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_216342

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           399     3e-113
IGHD3-3*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GG	TTACGATTTTTGGAGTGGTT	TCAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTTACGATTTTTGGAGTGGTTTCAGACTTTGACTAC	ARVTIFGVVSDFDY	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	106	8	0	93
CDR3-IMGT (germline)	291	295	5	5	0	0	100
Total	N/A	N/A	293	274	19	0	93.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T 
                    Query_8543   3    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTACC  92
V  93.5% (274/293)  IGHV1-18*04  1    ...G.T............................................................................C.......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       Y  H  G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  T  D  G  N  T  H  Y 
                    Query_8543   93   TACCACGGTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTACCGATGGGAACACACACTAT  182
V  93.5% (274/293)  IGHV1-18*04  91   AG.T.........G.......................................................TA.A....T......A.....  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  H  N  V  Q  G  R  A  T  L  T  T  D  S  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_8543   183  GCACACAACGTCCAGGGCAGAGCCACCTTGACCACAGACTCATCCACGAGCACCGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  272
V  93.5% (274/293)  IGHV1-18*04  181  .....G..GC............T....A...........A.............A....................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  V  T  I  F  G  V  V  S  D  F  D  Y  W  G  R  G  T  L  V  T  V  S 
                    Query_8543   273  ACGGCCGTGTATTACTGTGCGAGGGTTACGATTTTTGGAGTGGTTTCAGACTTTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCC  362
V  93.5% (274/293)  IGHV1-18*04  271  .......................-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (20/20)   IGHD3-3*01   4    -------------------------....................---------------------------------------------  23
J  97.8% (44/45)    IGHJ4*02     4    -------------------------------------------------..................A......................  44

                                          
                                       S  
                    Query_8543   363  TCAG  366
J  97.8% (44/45)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_288917

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           329     3e-92
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_8544   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  S  L  K  P  R  V  T  F  S  L  D  T  S  K  N 
                    Query_8544   91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCTCCCTCAAGCCTCGAGTCACCTTTTCATTAGACACGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*08  139  ...A....G......T.......T..............................AG..........A.A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G 
                    Query_8544   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGT  270
V  93.0% (227/244)  IGHV4-59*08  229  .............A......C..........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_8544   271  TATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  334
J  94.2% (49/52)    IGHJ1*01     1    ------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_288916

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            374     8e-106
IGHD1-26*01                                                                                           14.1    9.5   
IGHJ1*01                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD1-26*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	CAGAAATCGC	TATAGTG	CCAGTCTGGCGCCAGGCGAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCAGAAATCGCTATAGTGCCAGTCTGGCGCCAGGCGAT	ARGRNRYSASLAPGD	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	265	26	0	91.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  P  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  D
                    Query_8545   1    GCAGCTGGTGCAGTCTGGGCCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTTACCAGCGA  90
V  91.1% (265/291)  IGHV1-8*02   6    ...................G.............................................................C......T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  A  G  Q  R  L  E  W  M  G  W  M  N  P  E  S  G  L  T  G  Y  A  Q
                    Query_8545   91   TGATATCAATTGGGTGCGACAGGCCGCTGGACAAAGACTTGAGTGGATGGGATGGATGAACCCTGAAAGCGGACTCACAGGCTATGCACA  180
V  91.1% (265/291)  IGHV1-8*02   96   .........C...............A........G.G...........................A.C..T..TAA...............  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  K  G  R  L  T  L  T  R  D  T  S  I  S  T  A  Y  L  E  L  I  S  L  R  Y  G  D  T  A
                    Query_8545   181  GAACTTCAAGGGCAGACTCACCCTGACCAGGGACACCTCCATAAGCACAGCCTACCTGGAGCTGATCAGCCTGAGATATGGCGACACGGC  270
V  91.1% (265/291)  IGHV1-8*02   186  ...G...C........G.....A........A.......................A.........G...........C..AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  F  C  A  R  G  R  N  R  Y  S  A  S  L  A  P  G  D  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8545   271  CGTCTATTTCTGTGCGCGAGGCAGAAATCGCTATAGTGCCAGTCTGGCGCCAGGCGATTGGGGCCAGGGGACCCTGGTCACCGTCTCCTC  360
V  91.1% (265/291)  IGHV1-8*02   276  ...G....A.......A....---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R  G                                                                     
D  100.0% (7/7)     IGHD1-26*01  3    -------------------------------.......----------------------------------------------------  9
J  97.1% (33/34)    IGHJ1*01     19   ----------------------------------------------------------...........C....................  50

                                        
                                        
                    Query_8545   361  AG  362
J  97.1% (33/34)    IGHJ1*01     51   ..  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_288915

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           329     3e-92
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCGA	TCGGCGCGGA	TCGGGGAG	CCTATTGTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACCGATCGGCGCGGATCGGGGAGCCTATTGTCCTACTACTACGCTATGGACGTC	TTDRRGSGSLLSYYYAMDV	249	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	24	6	0	80
FR3-IMGT	135	248	114	101	13	0	88.6
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	233	23	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8546   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAAGGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.0% (233/256)  IGHV3-15*01  47   .......T......................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  H  I  K  S  R  A  D  G  G  T  T  D  Y  A  A  P  V  R  G  R  Y  T  I  S  R  D  
                    Query_8546   91   AGTGGGTTGGCCATATTAAAAGCAGAGCGGACGGTGGAACCACAGACTACGCTGCACCCGTGAGAGGAAGATACACCATCTCAAGAGATG  180
V  91.0% (233/256)  IGHV3-15*01  137  ............G...........A.A.T..T.....G..A......................A...C....T.................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  R  N  T  L  F  L  Q  M  N  S  L  R  T  E  D  T  G  V  F  Y  C  T  T  D  R  R  G  S  
                    Query_8546   181  ATTCAAGAAACACGTTGTTTCTTCAGATGAACAGCCTGAGGACCGAGGACACAGGCGTCTTTTACTGTACCACCGATCGGCGCGGATCGG  270
V  91.0% (233/256)  IGHV3-15*01  227  ......A.......C...A...G..A.............AA.............C...G.A............A..--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (8/8)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      --CDR3-IMGT----------------------->                                 
                                      G  S  L  L  S  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_8546   271  GGAGCCTATTGTCCTACTACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  338
D  100.0% (8/8)     IGHD3-10*01  18   ....----------------------------------------------------------------  21
J  96.4% (53/55)    IGHJ6*02     8    -------------...........G...............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_288914

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD6-6*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTC	ATTREQLVPIFDF	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	268	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  L  T  S  Y
                    Query_8547   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGCAAGGGCTCTGGATATAGCTTAACCAGTTA  90
V  93.4% (268/287)  IGHV5-51*01  6    ............................................................T.....T........C.....T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  V  P  G  K  G  L  E  W  I  G  I  I  Y  P  A  D  S  E  T  K  Y  S  P
                    Query_8547   91   TTGGATCGCCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATTGGGATCATCTATCCTGCTGACTCTGAAACCAAATACAGCCC  180
V  93.4% (268/287)  IGHV5-51*01  96   C.......G.............A.........................G................G.........T....G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  S  S  S  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8547   181  GTCCTTCCAAGGCCAGGTCACCATCTCGGCCGACAAGTCCAGCAGCTCCGCCTTCTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (268/287)  IGHV5-51*01  186  ...........................A.............T....A......A.C..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        I  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8547   271  CATATATTATTGTGCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTCTGGGGGCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  93.4% (268/287)  IGHV5-51*01  276  ...G.....C.......---------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------.......A......C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_288913

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         357     1e-100
IGHD3-10*01                                                                                           10.3    114   
IGHJ6*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GA	GGGGA	CAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAGGGGACATTATGGACGTC	ARGGDIMDV	244	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_8548     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGT  90
V  95.6% (239/250)  IGHV4-30-2*01  49   .........................................................................................C  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  H  S  G  L  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  R  S 
                    Query_8548     91   CTGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACAGGTCC  180
V  95.6% (239/250)  IGHV4-30-2*01  139  ..............G......T...........AG..C.T...A......................G.......................  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                         K  N  Q  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  D  I  M  D  V 
                    Query_8548     181  AAGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAGGGGACATTATGGACGTC  270
V  95.6% (239/250)  IGHV4-30-2*01  229  ...........C.......A..................................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01    16   ------------------------------------------------------------------------.....-------------  20
J  97.7% (42/43)    IGHJ6*02       20   --------------------------------------------------------------------------------..........  29

                                                                         
                                         W  G  Q  G  T  T  V  S  V  S  S 
                    Query_8548     271  TGGGGCCAAGGGACCACGGTCTCCGTCTCCTCA  303
J  97.7% (42/43)    IGHJ6*02       30   .....................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_288912

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           311     4e-87
IGHD6-13*01                                                                                           12.2    31   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGACACTGCAC	TATAGC	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGACACTGCACTATAGCCCCTTTGACTAC	ARGTLHYSPFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	223	24	0	90.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  D  N  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8549   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGGTTCGACAACTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.3% (223/247)  IGHV3-33*01  47   ....................................CC...AGT.G.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  A  V  I  L  S  D  G  T  S  T  N  Y  I  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8549   91   ACTGGGTGGCAGTTATATTGTCTGATGGAACCAGTACAAATTATATAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  90.3% (223/247)  IGHV3-33*01  137  .G................G..A........GT.A..A.T.C...GC............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  T  L  H  Y  S  P  
                    Query_8549   181  AGAATACGCTTTATCTGCAATTGAACAGCCTCAGAGTCGAGGACACGGCTGTCTATTACTGTGCGAGGGGGACACTGCACTATAGCCCCT  270
V  90.3% (223/247)  IGHV3-33*01  227  ....C.....G.........A..........G....C...............G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD6-13*01  4    --------------------------------------------------------------------------------......----  9
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8549   271  TTGACTACTGGGGCCAGGGAACCCTGGTTACCGTCTCGTCAG  312
J  95.5% (42/44)    IGHJ4*02     7    ............................C........C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_288910

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         339     2e-95
IGHD5-18*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGCGGTA	GATACACCTATGG	GATTTATGTACTTCC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCGGTAGATACACCTATGGGATTTATGTACTTCCTTGATTAC	ARGAVDTPMGFMYFLDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  G  A  S  G  F  S  F  S  T  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8550     1    GGTCCCTGAGACTCTCCTGTGGAGCCTCTGGATTCAGTTTCAGTACTTATTCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-30-3*01  47   .....................C..............CC.......GC...G.......................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  A  Y  D  G  S  N  K  Y  Y  G  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_8550     91   AGTGGGTGGCAGTTATAGCATATGATGGAAGCAATAAATATTATGGAGACTCCGTAAAGGGCCGATTCTCCATCTCCAGAGACAATTCCA  180
V  93.6% (233/249)  IGHV3-30-3*01  137  .................T......................C..C.C.........G............A.....................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                        K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  A  V  D  T  P  M  
                    Query_8550     181  AGAACACATTGTTTCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTCTATTACTGTGCGAGAGGGGCGGTAGATACACCTATGG  270
V  93.6% (233/249)  IGHV3-30-3*01  227  .......GC...A.......................................G................---------------------  295
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD5-18*01    4    -----------------------------------------------------------------------------......G......  16

                                        GT-------------------->                                  
                                        G  F  M  Y  F  L  D  Y  W  G  Q  G  T  L  A  T  V  S  A  
                    Query_8550     271  GATTTATGTACTTCCTTGATTACTGGGGCCAGGGAACCCTGGCCACCGTCTCCGCAG  327
J  92.9% (39/42)    IGHJ4*02       7    ---------------....C......................T..........T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_288918

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           416     2e-118
IGHD3-22*01                                                                                           33.4    2e-05 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TC	ACTATGAAAGTAGTGATTATTAC	ACAGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCACTATGAAAGTAGTGATTATTACACAGATGATGCTTTTAATATC	ASHYESSDYYTDDAFNI	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	277	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  T  S  G  Y  S  F  T  S  Y
                    Query_8551   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGCTTTACCAGCTA  90
V  96.2% (277/288)  IGHV5-51*03  6    ................................................................GG........................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  L  I  S  P  S  D  S  D  T  T  Y  S  P
                    Query_8551   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGCCTCATCTCTCCCAGTGACTCTGATACCACATACAGCCC  180
V  96.2% (277/288)  IGHV5-51*03  96   ........G..........................................GA......A...TG...............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  A
                    Query_8551   181  TTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACCCCGC  270
V  96.2% (277/288)  IGHV5-51*03  186  G....................................................................................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  S  H  Y  E  S  S  D  Y  Y  T  D  D  A  F  N  I  W  G  Q  G  T  M  V  P  L
                    Query_8551   271  CATGTATTACTGTGCGAGTCACTATGAAAGTAGTGATTATTACACAGATGATGCTTTTAATATCTGGGGCCAAGGGACAATGGTCCCCCT  360
V  96.2% (277/288)  IGHV5-51*03  276  ..................------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  91.3% (21/23)    IGHD3-22*01  6    --------------------.......T.......G.......-----------------------------------------------  28
J  94.0% (47/50)    IGHJ3*02     1    ------------------------------------------------..........G..........................A..G.  42

                                              
                                        S  S  
                    Query_8551   361  CTCTTCAG  368
J  94.0% (47/50)    IGHJ3*02     43   ........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_123559

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           388     5e-110
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	291	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	68	6	0	91.9
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	297	7	6	1	0	85.7
Total	N/A	N/A	294	271	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  
                    Query_8552   4    AGATGCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCA  93
V  92.2% (271/294)  IGHV5-51*01  2    ..G.....................C........A.....................G.........A......C.........C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  H  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  
                    Query_8552   94   ATCACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATA  183
V  92.2% (271/294)  IGHV5-51*01  92   GCT....................................................G.......A.....G.......G....C.....C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  
                    Query_8552   184  GCCCGTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACA  273
V  92.2% (271/294)  IGHV5-51*01  182  ...................G........C...................................G.......G.................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------CDR3-IMGT----------->                                  
                                      T  A  L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_8552   274  CCGCCTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  357
V  92.2% (271/294)  IGHV5-51*01  272  .....A.......C.....G....------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   --------------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    ---------------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_123558

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            391     6e-111
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  I  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_8553  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGATCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.1% (270/290)  IGHV1-8*02  6    ..................G.................................G........................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_8553  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.1% (270/290)  IGHV1-8*02  96   ........A.........................................................C.......................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_8553  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.1% (270/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8553  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.1% (270/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_123554

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           355     3e-100
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_8554   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGCC  93
V  96.0% (237/247)  IGHV4-31*03  50   .....TCC...A.....................C......C.............................C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_8554   94   TGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  96.0% (237/247)  IGHV4-31*03  140  ....G.........T.C.........................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  
                    Query_8554   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCG  273
V  96.0% (237/247)  IGHV4-31*03  230  ...................................................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  100.0% (51/51)   IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8554   274  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (51/51)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_123557

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           305     3e-85
IGHD3-3*01                                                                                            35.3    4e-06
IGHJ6*02                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTTAATCTCCCCTC	GTATTACGATTTTTGGAG	CGGAGGCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTTAATCTCCCCTCGTATTACGATTTTTGGAGCGGAGGCAACTACTACTACGGTTTGGACGTC	ARLNLPSYYDFWSGGNYYYGLDV	237	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	123	21	19	0	2	90.5
FR3-IMGT	124	236	114	106	7	1	93
CDR3-IMGT (germline)	237	241	5	5	0	0	100
Total	N/A	N/A	241	220	18	3	91.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  S  I  A  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_8555   4    CCCTGAGACTCTCCTGCACTGTCTCTGGCGCCTCCATCGCAAGTTACTACTGGAGCTGGATCCGGCAGCCCCCTGGAAAGGGACTGGAGT  93
V  91.3% (220/241)  IGHV4-59*08  50   .....TCC...A................T.G.......AGT................................A..G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S     N  Y  N  P  S  L  K  S  R  L  T  M  S  L  D  T  S  K  N  
                    Query_8555   94   GGATTGGGTATATCTATTACAGTGGGAGCA---ACTACAACCCCTCCCTCAAGAGTCGACTCACCATGTCACTAGACACGTCCAAGAACC  180
V  91.3% (220/241)  IGHV4-59*08  140  ..............................CCA..........................G.......A...G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------------CDR3
                                      Q  F  S  L  N  L  T  S  V  T  A  A  D  S  A  M  Y  Y  C  A  R  L  N  L  P  S  Y  Y  D  F  
                    Query_8555   181  AGTTCTCCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCCATGTATTACTGTGCGAGGCTTAATCTCCCCTCGTATTACGATTTTT  270
V  91.3% (220/241)  IGHV4-59*08  230  .............G....G...................A.....G................-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (18/18)   IGHD3-3*01   1    ----------------------------------------------------------------------------..............  14

                                      -IMGT----------------------------->                                 
                                      W  S  G  G  N  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8555   271  GGAGCGGAGGCAACTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  338
D  100.0% (18/18)   IGHD3-3*01   15   ....----------------------------------------------------------------  18
J  98.2% (55/56)    IGHJ6*02     7    ------------..............A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_123551

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           12.2    33   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	44	6	0	88
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	47	4	0	92.2
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	100	14	0	87.7
CDR3-IMGT (germline)	261	268	8	7	1	0	87.5
Total	N/A	N/A	268	236	32	0	88.1


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  
                    Query_8556   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACTTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCC  90
V  88.1% (236/268)  IGHV4-34*01  26   ........T.......T....................C........CTA..G..G......C.................C...A.C....  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  
                    Query_8556   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCA  180
V  88.1% (236/268)  IGHV4-34*01  116  ................G......................A............CA.C.AC......C..T......A..............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      M  S  V  D  T  S  K  K  Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_8556   181  TGTCAGTAGACACGTCCAAGAAACAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGG  270
V  88.1% (236/268)  IGHV4-34*01  206  .A....................C..GT...........C..A......T.....................G.....C......A....--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------------------.  13

                                      -------CDR3-IMGT--------------->                                  
                                      G  W  R  R  Q  R  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8556   271  GCTGGCGAAGACAGCGCAACTGGTTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  336
D  100.0% (6/6)     IGHD6-19*01  14   .....-------------------------------------------------------------  18
J  98.0% (49/50)    IGHJ5*02     2    ----------------..............................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_123550

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           338     5e-95
IGHD2-15*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACGA	CCCTCGGG	GGATACTGTAGGGGGGGT	GGTTGTTCTCCCCAGAACTCCGGAC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGACCCTCGGGGGATACTGTAGGGGGGGTGGTTGTTCTCCCCAGAACTCCGGACTGGACGTC	TTLGGYCRGGGCSPQNSGLDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  S  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8557   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATCCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.9% (231/246)  IGHV3-30*03  47   ............................T....T........................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  S  Y  D  G  V  K  K  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  E  N  S  
                    Query_8557   91   AGTGGGTGGCAATAATATCATATGATGGAGTTAAGAAATATTATGCAGACTCCGTGAAGGGCCGATTCTCCATCTCCAGAGAAAATTCCA  180
V  93.9% (231/246)  IGHV3-30*03  137  ...........G.T...............AG...T.....C...........................A.............C.......  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  H  C  T  T  L  G  G  Y  C  R  G  
                    Query_8557   181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGACCTGAGGACACGGCTCTGTATCACTGTACGACCCTCGGGGGATACTGTAGGGGGG  270
V  93.9% (231/246)  IGHV3-30*03  227  .......G...........................G..............G.....T.....G...------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  83.3% (15/18)    IGHD2-15*01  2    --------------------------------------------------------------------------.....T.....T..T.  17

                                      DR3-IMGT-------------------------->                                 
                                      G  G  C  S  P  Q  N  S  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8557   271  GTGGTTGTTCTCCCCAGAACTCCGGACTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  338
D  83.3% (15/18)    IGHD2-15*01  18   ..------------------------------------------------------------------  19
J  100.0% (41/41)   IGHJ6*02     22   ---------------------------.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_123553

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           271     7e-75
IGHD3-10*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGGGAGCA	ATGGCTGGGGAAGGTATTATAA	TTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTATTATAATTATGGTATGGACGCC	SRGHRGSNGWGRYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	21	3	6	70
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	214	31	6	85.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  S  G  Y  C  W  N  W  S  R  R  P  P  G  K  G 
                    Query_8558   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGAGGGTCCTTCAGTGACAGTGGTTACTGTTGGAATTGGAGCCGCCGGCCACCAGGGAAGGGA  90
V  85.3% (214/251)  IGHV4-34*01  49   .............................T............------.......AC....GC....T.....A...C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  T  N  G  G  N  I  H  L  N  P  S  L  Q  S  R  V  T  M  S  A  D  T  S 
                    Query_8558   91   CTGGAGTGGATTGGCGAAATCACTAATGGTGGAAACATCCACCTCAATCCGTCCCTCCAGAGTCGAGTCACCATGTCAGCAGACACGTCC  180
V  85.3% (214/251)  IGHV4-34*01  133  ..............G.......A.C..A......G..C.A..TA...C.........A................A....T..........  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  R  V  N  S  V  T  A  A  D  T  S  V  Y  Y  C  S  R  G  H  R  G  S  N  G 
                    Query_8558   181  AAGAACCAGTTCTCCCTGAGAGTGAACTCCGTGACCGCCGCGGACACGTCTGTATATTATTGTTCGAGAGGCCACCGGGGGAGCAATGGC  270
V  85.3% (214/251)  IGHV4-34*01  223  ...................AGC...G...T..................G....G.....C...G.......-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  81.8% (18/22)    IGHD3-10*01  9    -------------------------------------------------------------------------------------....T  13

                                      DR3-IMGT------------------------>                                 
                                       W  G  R  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_8558   271  TGGGGAAGGTATTATAATTATGGTATGGACGCCTGGGGCCAGGGGACCACGGTCTCCGTCTCCTCA  336
D  81.8% (18/22)    IGHD3-10*01  14   .C...G..T........-------------------------------------------------  30
J  93.3% (42/45)    IGHJ6*02     18   ---------------------..........T.........A............A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_123552

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATTTGCTGA	TTCGGGGA	TTGAAAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGTC	AKFADSGIETYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	276	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  S  F
                    Query_8559   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTATCAGCTT  90
V  96.2% (276/287)  IGHV5-51*01  6    ...................................................................................C.....A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  C  L  G  I  I  D  P  R  D  S  D  T  T  Y  S  P
                    Query_8559   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGCTTGGGGATCATCGATCCTCGTGACTCTGATACCACATACAGCCC  180
V  96.2% (276/287)  IGHV5-51*01  96   ........G....................................GA...........T.....G...............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  T  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8559   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (276/287)  IGHV5-51*01  186  .............................C...........T................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  K  F  A  D  S  G  I  E  T  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_8559   271  CATGTATTATTGTGCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTC  360
V  96.2% (276/287)  IGHV5-51*01  276  .........C.......-------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                           
D  100.0% (8/8)     IGHD3-10*01  13   ---------------------------........-------------------------------------------------------  20
J  98.0% (48/49)    IGHJ6*02     14   ------------------------------------------.............................................C..  61

                                       
                                       
                    Query_8559   361  A  361
J  98.0% (48/49)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_122688

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     9e-100
IGHD6-13*01                                                                                           21.8    0.041 
IGHJ3*01                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  L  S  G  G  S  I  S  S  G  G  F  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_8560   1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGGCTCCATCAGCAGTGGTGGTTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.2% (238/250)  IGHV4-31*03  49   .....................G..............................A........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_8560   91   CTGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCT  180
V  95.2% (238/250)  IGHV4-31*03  139  .....................T..................A.................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  P  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V 
                    Query_8560   181  AAGAACCAATTCTCCCCGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTA  270
V  95.2% (238/250)  IGHV4-31*03  229  ........G.......T..A.....GC...............................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD6-13*01  11   ------------------------------------------------------------------------...........-------  21

                                      ----------------->                                  
                                       G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8560   271  GGCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  98.0% (48/49)    IGHJ3*01     2    ---.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_122686

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           339     1e-95
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	N/A	AGCGAGGGCCTGCCTGGCACAC	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCGAGGGCCTGCCTGGCACACTGCTTTTGATATC	AKRGPAWHTAFDI	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	229	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8561   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTCGTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.0% (229/241)  IGHV4-59*08  49   ...........................................G..AC.......G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  N  S  G  N  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8561   91   TGGATTGGGTATATCTTTAACAGTGGGAACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.0% (229/241)  IGHV4-59*08  139  ................A.T.........G.......................A.....................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  R  G  P  A  W  H  T  A  F 
                    Query_8561   181  CAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTATATTATTGTGCGAAGCGAGGGCCTGCCTGGCACACTGCTTTT  270
V  95.0% (229/241)  IGHV4-59*08  229  ..............G....G...........................G.....C.......-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
J  100.0% (47/47)   IGHJ3*02     4    -----------------------------------------------------------------------------------.......  10

                                      ----->                                  
                                       D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8561   271  GATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  310
J  100.0% (47/47)   IGHJ3*02     11   ........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_122687

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            378     3e-107
IGHD1-26*01                                                                                           12.2    35    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y
                    Query_8562   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACCACTTA  90
V  91.7% (266/290)  IGHV1-8*01   6    ..................G...............................................T........C..........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F  A  Q
                    Query_8562   91   TGATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTTGCACA  180
V  91.7% (266/290)  IGHV1-8*01   96   .................................A..G..............A..............C.G...T..........A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D  T  A
                    Query_8562   181  GAGATTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGACACGGC  270
V  91.7% (266/290)  IGHV1-8*01   186  ..AG...C............................C.....A.................GC............G..C..AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_8562   271  CATATATTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  352
V  91.7% (266/290)  IGHV1-8*01   276  .G.G................--------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   -----------------------------...G.....--------------------------------------------  18
J  100.0% (40/40)   IGHJ5*02     11   ------------------------------------------........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_122685

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD6-6*01                                                                                            14.1    9.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTC	ATTREQLVPIFDF	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	70	4	0	94.6
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	106	8	0	93
CDR3-IMGT (germline)	289	292	4	4	0	0	100
Total	N/A	N/A	291	270	21	0	92.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  L  T  
                    Query_8563   2    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGCAAGGGCTCTGGATATAGCTTAACCA  91
V  92.8% (270/291)  IGHV5-51*01  2    ....G........G..................................................T.....T........C.....T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  V  P  G  K  G  L  E  W  I  G  I  I  Y  P  A  D  S  E  T  K  Y  
                    Query_8563   92   GTTATTGGATCGCCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATTGGGATCATCTATCCTGCTGACTCTGAAACCAAATACA  181
V  92.8% (270/291)  IGHV5-51*01  92   .C..C.......G.............A.........................G................G.........T....G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  S  S  S  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_8563   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCGGCCGACAAGTCCAGCAGCTCCGCCTTCTTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  92.8% (270/291)  IGHV5-51*01  182  ...............................A.............T....A......A.C..............................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  A  I  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8563   272  CCGCCATATATTATTGTGCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTCTGGGGGCAGGGAACCCTGGTCACCGTCTCCTCAG  361
V  92.8% (270/291)  IGHV5-51*01  272  .......G.....C.......---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -----------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------.......A......C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_122682

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           333     1e-93
IGHD1-7*01                                                                                            14.1    8.4  
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCAGTTT	GAACTAC	GGCCTTGGTGCAG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCAGTTTGAACTACGGCCTTGGTGCAGTTTTGATATT	ARHQFELRPWCSFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	232	19	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  N  Y  Y  W  G  W  V  R  Q  P  P  G  K  G 
                    Query_8564   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAATTACTACTGGGGCTGGGTCCGCCAGCCCCCAGGGAAGGGA  90
V  92.4% (232/251)  IGHV4-39*01  49   .............................................A...G................A......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  T  G  L  T  Y  Y  T  P  S  L  E  S  R  L  T  I  S  V  D  T  S 
                    Query_8564   91   CTGGAGTGGATTGGGAGCATCTATTATACTGGGCTCACCTACTACACCCCGTCCCTCGAGAGTCGACTCACCATATCCGTGGACACGTCC  180
V  92.4% (232/251)  IGHV4-39*01  139  .................T..........G....AG...........A..........A........G.............A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  Q  F  S  L  S  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Q  F  E  L  R  P 
                    Query_8564   181  AGAAACCAGTTCTCCCTGAGCCTCAGCTCTGTGACCGCCGCAGATACGGCTGTATATTACTGTGCGAGACATCAGTTTGAACTACGGCCT  270
V  92.4% (232/251)  IGHV4-39*01  229  .AG................AG..G....................C........G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD1-7*01   11   ------------------------------------------------------------------------------.......-----  17

                                      ----------------->                                  
                                       W  C  S  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8564   271  TGGTGCAGTTTTGATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  97.7% (43/44)    IGHJ3*02     7    --------.........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_122683

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           364     5e-103
IGHD2-15*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGC	ATTGTAATGGT	AACAGGTGTTGGGG	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGCATTGTAATGGTAACAGGTGTTGGGGCGTC	ARDRHCNGNRCWGV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8565   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAACAACTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (240/247)  IGHV3-53*01  47   .............................................G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  I  Y  S  G  G  T  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  
                    Query_8565   91   AGTGGGTCTCACTTATTTATAGCGGTGGTACCACACACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGA  180
V  97.2% (240/247)  IGHV3-53*01  137  ...........G..................G....T...................................................A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  R  H  C  N  G  N  R  
                    Query_8565   181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGATAGGCATTGTAATGGTAACAGGT  270
V  97.2% (240/247)  IGHV3-53*01  227  .................................C.................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  90.9% (10/11)    IGHD2-15*01  6    ------------------------------------------------------------------------......G....-------  16

                                      ---------->                                 
                                      C  W  G  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8565   271  GTTGGGGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (37/37)   IGHJ6*02     26   -------.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_122680

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           335     4e-94
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_8566   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.9% (229/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8566   91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCC  180
V  93.9% (229/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C.................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  R  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_8566   181  AAGAACCAGTTCTCCCTGAACCGGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  93.9% (229/244)  IGHV4-39*01  229  ....................G.T..G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8566   271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_122681

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           288     4e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACTTTGACTTC	ARVSTSAYYFDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	214	30	0	87.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_8567   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGACAACCCCCAGGAAAGGGACTGGAG  90
V  87.7% (214/244)  IGHV4-59*01  49   .................................T........A.....T.C.........A....G..G........G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  S  F  D  T  S  K  R 
                    Query_8567   91   TGGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGTCCTTTGACACGTCCAAGAGG  180
V  87.7% (214/244)  IGHV4-59*01  139  .......GGT....C...........G.G..C...C................A..G............A..AG.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  Y  Y  F  D 
                    Query_8567   181  CAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATACTACTTTGAC  270
V  87.7% (214/244)  IGHV4-59*01  229  .............A....AGC..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-2*01   17   ---------------------------------------------------------------------......---------------  22
J  91.3% (42/46)    IGHJ4*02     1    -------------------------------------------------------------------------------...........  11

                                      -->                                
                                       F  W  G  R  G  T  L  V  V  V  S  S
                    Query_8567   271  TTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  305
J  91.3% (42/46)    IGHJ4*02     12   .A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_351592

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD6-13*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	ARHRYLGPRQQATENDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  L  S  S  Y
                    Query_8568   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATTTCCTGTAAGGGTTCTGGATACAGATTAAGCAGTTA  90
V  95.9% (279/291)  IGHV5-51*01  6    ......................................................C.......................C..T.C...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_8568   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCGTCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   C.......G..........................................G...A....................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8568   181  GTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  ......................A...........................................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_8568   271  CATGTATTACTGTGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  95.9% (279/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-13*01  8    ---------------------------------------.......--------------------------------------------  14
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_8568   361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_351593

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           322     2e-90
IGHD2-8*01                                                                                            21.8    0.041
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-8*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCAA	AGTTAGGCGGACC	ATATTGTACTA	CTATAAATTGTAAT	CCCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGTTAGGCGGACCATATTGTACTACTATAAATTGTAATCCC	AKLGGPYCTTINCNP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	226	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  S  Y  W  M  H  W  V  R  Q  D  P  G  K  G  L  
                    Query_8569   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCGCCTTCAGTTCCTACTGGATGCACTGGGTCCGCCAAGATCCAGGGAAGGGGCTGG  90
V  91.9% (226/246)  IGHV3-74*01  47   ...............................A...A........AG..........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  P  D  G  R  V  Q  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8569   91   TGTGGGTCTCGCGTATTAATCCTGATGGACGTGTCCAAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.9% (226/246)  IGHV3-74*01  137  ..........A.........AG......GA..AG.AC..G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  M  Y  L  Q  M  N  G  L  R  A  E  D  T  S  V  Y  Y  C  A  K  L  G  G  P  Y  C  T  
                    Query_8569   181  AGAACACGATGTATCTGCAAATGAATGGTCTGAGAGCCGAGGACACGTCTGTGTACTACTGTGCAAAGTTAGGCGGACCATATTGTACTA  270
V  91.9% (226/246)  IGHV3-74*01  227  ........C................CA....................G.......T..........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD2-8*01   4    -------------------------------------------------------------------------------...........  14

                                      ---------------->                                  
                                      T  I  N  C  N  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8569   271  CTATAAATTGTAATCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (37/37)   IGHJ5*02     15   --------------.....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_351591

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8570   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8570   91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_8570   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  95.5% (231/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8570   271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_351598

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           433     1e-123
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	73	1	0	98.6
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	285	8	0	97.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  T  S  C  K  G  S  G  Y  S  F  T  
                    Query_8571   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGACCTCCTGTAAGGGTTCTGGATACAGTTTTACCA  93
V  97.3% (285/293)  IGHV5-51*03  2    .........................................................T........................C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_8571   94   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  183
V  97.3% (285/293)  IGHV5-51*03  92   G.........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_8571   184  GTCCGTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  97.3% (285/293)  IGHV5-51*03  182  .C..........................C....C....A..................A................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_8571   274  CCGCCATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  363
V  97.3% (285/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)   IGHD6-19*01  4    --------------------------------------...............-------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   --------------------------------------------------------..................................  45

                                         
                                      S  
                    Query_8571   364  CAG  366
J  100.0% (37/37)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_198736

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           343     2e-96
IGHD3-16*02                                                                                           41.1    6e-08
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	GATTACGTTTGGGGGAATTATCGT	CACCTTCCCGGC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGATTACGTTTGGGGGAATTATCGTCACCTTCCCGGCGACTTC	AREDYVWGNYRHLPGDF	230	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	24	0	0	100
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	112	2	0	98.2
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	222	3	0	98.7


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_8572   13   GTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  98.7% (222/225)  IGHV3-33*01  72   ..........................................................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        V  S  N  K  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_8572   103  TGTAAGTAATAAATACTATACAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTACCTGCAAATGAA  192
V  98.7% (222/225)  IGHV3-33*01  162  ..G................G..........................................................T...........  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------------CDR3-IMGT-------------------->  
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  D  Y  V  W  G  N  Y  R  H  L  P  G  D  F  W
                    Query_8572   193  CAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGGATTACGTTTGGGGGAATTATCGTCACCTTCCCGGCGACTTCTG  282
V  98.7% (222/225)  IGHV3-33*01  252  .............................................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  95.8% (23/24)    IGHD3-16*02  8    ----------------------------------------------................G.......--------------------  31
J  97.5% (39/40)    IGHJ4*02     9    ----------------------------------------------------------------------------------....A...  16

                                                                      
                                        G  Q  G  T  L  V  T  V  S  S  
                    Query_8572   283  GGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  314
J  97.5% (39/40)    IGHJ4*02     17   ................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_198734

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-22*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGAAA	TATGACTATGAT	CTTGGAGACGTGGGTCTCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGAAATATGACTATGATCTTGGAGACGTGGGTCTCCACAACTTTGACTCC	ARAPKYDYDLGDVGLHNFDS	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  N  Y  F  W  S  R  I  R  Q  P  P  G  K  R  L  E 
                    Query_8573   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTAATTACTTCTGGAGCCGGATTCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  91.8% (224/244)  IGHV4-59*01  49   ......................................C....G.....A.......T....C..................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  L  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  I  D  T  P  K  N 
                    Query_8573   91   TGGATTGGGTATATCTATTATAGTGGACTCACCAAGTACAACCCGTCCCTCAAGAGTCGAGTCAGCATATCAATTGACACGCCCAAGAAC  180
V  91.8% (224/244)  IGHV4-59*01  139  ....................C.....GAG......C........C...................C.......G.A......T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       H  F  S  L  K  V  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  A  P  K  Y  D  Y  D  L  G 
                    Query_8573   181  CACTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCATTTATTACTGTGCGAGAGCCCCGAAATATGACTATGATCTTGGA  270
V  91.8% (224/244)  IGHV4-59*01  229  ..G............C.............................G.G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-22*01  2    ------------------------------------------------------------------------...T........------  13

                                      GT------------------------>                                  
                                       D  V  G  L  H  N  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8573   271  GACGTGGGTCTCCACAACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  97.8% (44/45)    IGHJ4*02     4    ----------------.........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_198732

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD5-12*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GACGCGGGA	TGGCTAC	AATACCTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGGACGCGGGATGGCTACAATACCTATTGACTGC	AGGRGMATIPIDC	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  T  Y  Y  W  T  W  I  R  R  P  P  G  K  G  L  E 
                    Query_8574   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTACTTACTACTGGACCTGGATCCGGCGGCCCCCAGGGAAGGGACTGGAA  90
V  93.0% (227/244)  IGHV4-59*01  49   .......................................A...G...........G...........A.....................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  T  H  Y  S  G  D  T  N  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  T  S  K  N 
                    Query_8574   91   TGGATTGGCTATACTCATTACAGTGGGGACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCATCATATCAGTAGACACGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*01  139  ........G....TCT...........AG...................................C.........................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       L  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  G  R  G  M  A  T  I  P  I 
                    Query_8574   181  CTGCTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGGGAGGACGCGGGATGGCTACAATACCTATT  270
V  93.0% (227/244)  IGHV4-59*01  229  .A.T.........A.......................................C......A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-12*01  11   -------------------------------------------------------------------------.......----------  17
J  97.6% (40/41)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                 
                                       D  C  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_8574   271  GACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  309
J  97.6% (40/41)    IGHJ4*02     9    ....A..................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_198731

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           291     6e-81
IGHD6-6*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	14	10	0	58.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	217	31	0	87.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  P  F  D  G  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8575   1    GGTCCCTGAGACTCTCCTGTACAGCCTCAGGCTTTCCCTTCGACGGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.5% (217/248)  IGHV3-21*01  47   ....................G.......T..A..CA.....AGTA.C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  D  
                    Query_8575   91   AGTGGGTCTCATCCATCAGTAGTAGAGGTGCATATATTCAGTATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGACA  180
V  87.5% (217/248)  IGHV3-21*01  137  ................T........TA..AGT..C..AT.C..C..A......G..A..............................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_8575   181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  87.5% (217/248)  IGHV3-21*01  227  ....C..................AA...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8575   271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_198730

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            364     5e-103
IGHD3-3*01                                                                                            27.6    8e-04 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGGGGACTTCGGA	ATTTTTGGAGTGGT	GCATACCTAGGGGC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGGGGACTTCGGAATTTTTGGAGTGGTGCATACCTAGGGGCTATGGACGTC	ARVGGLRNFWSGAYLGAMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  R  L  T  F  S  S  D  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8576  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTCGATTAACGTTTAGTAGTGATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-7*03  47   .............................G....C..C........CT..........................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8576  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAGTACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (241/249)  IGHV3-7*03  137  .....................................A....................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------------CD
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  G  L  R  N  F  
                    Query_8576  181  AGAACTCACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAGAGTAGGGGGACTTCGGAATTTTT  270
V  96.8% (241/249)  IGHV3-7*03  227  ............................C.......................G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD3-3*01  9    ------------------------------------------------------------------------------------......  14

                                     R3-IMGT------------------------>                                 
                                     W  S  G  A  Y  L  G  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8576  271  GGAGTGGTGCATACCTAGGGGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  100.0% (14/14)   IGHD3-3*01  15   ........---------------------------------------------------------  22
J  100.0% (43/43)   IGHJ6*02    20   ----------------------...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_198739

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           302     3e-84
IGHD3-22*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GTCGGGAAGAAC	AGTGGTT	TCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTCGGGAAGAACAGTGGTTTCTTTTGACTTA	AKSGRTVVSFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	220	27	0	89.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  T  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8577   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCAACTTTAGCACGTATGCCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.1% (220/247)  IGHV3-23*01  47   ......................A.............C........GC..........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  N  S  T  K  Y  A  D  S  V  K  G  R  I  T  I  S  R  D  N  S  
                    Query_8577   91   AGTGGGTCTCAGCCATCAGTGGCAGTGGTAATAGCACAAAATATGCAGACTCCGTTAAGGGCCGGATCACCATCTCCAGAGACAATTCCA  180
V  89.1% (220/247)  IGHV3-23*01  137  .............T..T.....T......GG.......T.C..C...........G.........T........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  R  M  I  Y  L  Q  M  N  S  M  R  A  E  D  T  A  V  Y  L  C  A  K  S  G  R  T  V  V  S  
                    Query_8577   181  AGAGAATGATATATCTTCAAATGAACAGTATGAGAGCCGAGGACACGGCCGTATATCTTTGTGCGAAGTCGGGAAGAACAGTGGTTTCTT  270
V  89.1% (220/247)  IGHV3-23*01  227  ...AC.C.C.G.....G...........CC..........................TAC........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-22*01  17   -------------------------------------------------------------------------------.......----  23
J  88.4% (38/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                  
                                      F  D  L  W  G  Q  G  I  Q  V  P  V  S  S  
                    Query_8577   271  TTGACTTATGGGGCCAGGGAATCCAGGTCCCCGTCTCCTCAG  312
J  88.4% (38/43)    IGHJ4*02     7    ......AC.............C..T....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_198738

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            302     3e-84
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCCACGGGCTC	AGCAGTGGC	GATGACTCTGTTTA	TGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCCACGGGCTCAGCAGTGGCGATGACTCTGTTTATGACGAC	VVHGLSSGDDSVYDD	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	241	1	1	0	0	100
Total	N/A	N/A	241	217	24	0	90


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  R  V  S  G  G  S  I  R  D  S  H  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_8578   1    ACCCTGTCCCTCACCTGCCGTGTCTCTGGTGGCTCCATCCGCGACAGTCACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.0% (217/241)  IGHV4-4*02   49   ..................GC...................A..AGT...A.........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  F  H  S  G  S  A  K  Y  N  P  S  L  Q  S  R  L  T  M  S  L  D  K  S  R 
                    Query_8578   91   GAGTGGATTGGGGAAGTTTTTCACAGTGGGAGCGCCAAGTACAACCCGTCCCTTCAGAGTCGACTCACCATGTCACTAGACAAGTCTAGG  180
V  90.0% (217/241)  IGHV4-4*02   139  ...............A.C.A...T.........A....C..............CA........G.......A...G..........C.A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  K  L  Q  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  H  G  L  S  S  G  D  D 
                    Query_8578   181  AACCAGTTCTCCCTGAAGCTGCAGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGTGGTCCACGGGCTCAGCAGTGGCGATGAC  270
V  90.0% (217/241)  IGHV4-4*02   229  .....................AGC.....................................-----------------------------  289
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  100.0% (9/9)     IGHD6-19*01  7    ---------------------------------------------------------------------------.........------  15

                                      -------------->                                  
                                       S  V  Y  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8578   271  TCTGTTTATGACGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  97.6% (40/41)    IGHJ4*02     8    --------....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_45592

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         380     1e-107
IGHD4-4*01                                                                                            14.1    9.5   
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-4*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATAGAGAC	GACTATAGTA	CGTCGTCCTC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAGAGACGACTATAGTACGTCGTCCTCCGACCCC	ARHRDDYSTSSSDP	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	75	72	69	3	0	95.8
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	46	5	0	90.2
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	106	8	0	93
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  A  N 
                    Query_8579     4    GTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCAGGATACAGCTTTGCTAAT  93
V  91.8% (267/291)  IGHV5-10-1*01  4    ..G.....G..............................................................T............A.C.GC  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         H  W  I  T  W  V  R  Q  V  P  G  K  G  L  G  W  M  G  M  L  D  P  S  D  S  Y  S  N  Y  S 
                    Query_8579     94   CACTGGATCACCTGGGTCCGCCAGGTGCCCGGGAAAGGCCTGGGGTGGATGGGGATGCTTGATCCCAGTGACTCTTATAGCAACTACAGT  183
V  91.8% (267/291)  IGHV5-10-1*01  94   T.........G......G......A..................A...........G.A.......T.............C.........C  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  Q  G  H  V  T  F  S  A  D  K  T  I  N  T  A  Y  L  H  W  S  S  R  K  A  S  D  T 
                    Query_8579     184  CCGTCCTTCCAAGGCCACGTCACCTTCTCAGCTGACAAGACCATCAACACTGCCTACCTACATTGGAGCAGCCGGAAGGCCTCGGACACC  273
V  91.8% (267/291)  IGHV5-10-1*01  184  ........................A..............T......G............G..G..........T................  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><----------------CDR3-IMGT--------------->                                 
                                         A  I  Y  Y  C  A  R  H  R  D  D  Y  S  T  S  S  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_8579     274  GCCATATATTACTGTGCGAGACATAGAGACGACTATAGTACGTCGTCCTCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  363
V  91.8% (267/291)  IGHV5-10-1*01  274  .....G...............---------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                      
D  90.0% (9/10)     IGHD4-4*01     2    ------------------------------.....C....--------------------------------------------------  11
J  100.0% (41/41)   IGHJ5*02       11   --------------------------------------------------........................................  50

                                         
                                         
                    Query_8579     364  G  364
J  100.0% (41/41)   IGHJ5*02       51   .  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_45591

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           364     5e-103
IGHD3-10*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTACCGGGGAGGG	ATTACTTTGGTTCGGGGAGT	CGCCCCGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTACCGGGGAGGGATTACTTTGGTTCGGGGAGTCGCCCCGGCTTTGACTAC	ARHVPGRDYFGSGSRPGFDY	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	239	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8580   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  97.6% (239/245)  IGHV4-59*08  49   ..........................................................................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  N  N 
                    Query_8580   91   TGGATTGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAACAAC  180
V  97.6% (239/245)  IGHV4-59*08  139  ........G...............................................................G.............G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  R  P  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  V  P  G  R  D  Y  F  G 
                    Query_8580   181  CAGTTCTCCCTGAGGCCGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATGTACCGGGGAGGGATTACTTTGGT  270
V  97.6% (239/245)  IGHV4-59*08  229  .............A..T................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.0% (19/20)    IGHD3-10*01  3    -------------------------------------------------------------------------------......A....  13

                                      GT------------------------>                                  
                                       S  G  S  R  P  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8580   271  TCGGGGAGTCGCCCCGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  95.0% (19/20)    IGHD3-10*01  14   .........----------------------------------------------------  22
J  100.0% (44/44)   IGHJ4*02     5    -----------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_45590

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           304     1e-84
IGHD2-8*02                                                                                            16.1    2.2  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGCATCGCAGAA	GGTGGTGT	GAAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGCATCGCAGAAGGTGGTGTGAATTGGTTCGACCCC	AKDGIAEGGVNWFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  Q  F  S  F  Y  A  M  N  W  I  R  Q  A  P  G  K  G  L  
                    Query_8581   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCAGTTTAGTTTCTATGCCATGAACTGGATCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  88.8% (222/250)  IGHV3-23*01  47   ...................................ACC.....CAG...........G....G..........................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  G  I  S  G  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  N  I  T  R  D  N  S  
                    Query_8581   91   AGTGGGTCTCAGGCATTAGTGGAAGTGGTGGTACCACTTACTACGCAGACTCCGTGAAGGGCCGCTTCAACATTACCAGAGACAATTCTG  180
V  88.8% (222/250)  IGHV3-23*01  137  ............CT........T..........G...A..........................G....C...CT.............CA  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      G  N  T  V  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  D  G  I  A  E  G  G  
                    Query_8581   181  GGAACACGGTGTTTCTTCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTGTACTATTGTGCGAAAGATGGCATCGCAGAAGGTGGTG  270
V  88.8% (222/250)  IGHV3-23*01  227  A.......C...A...G...................C...............A..T..C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD2-8*02   14   -----------------------------------------------------------------------------------.......  20

                                      ---------------->                                  
                                      V  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8581   271  TGAATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  321
D  100.0% (8/8)     IGHD2-8*02   21   .--------------------------------------------------  21
J  97.8% (45/46)    IGHJ5*02     6    -----.........................................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_256253

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           338     5e-95
IGHD4-17*01                                                                                           21.8    0.041
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTCGGA	TGACTTCGGTGACT	TCCGGGGCAG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATTCGGATGACTTCGGTGACTTCCGGGGCAGCTGGTTCGACCCC	VKDSDDFGDFRGSWFDP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  I  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8582   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAATATCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  93.2% (233/250)  IGHV3-64*05  47   ..........................................G..G......T.....................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  G  I  S  G  N  G  H  R  T  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8582   91   AATATGTTTCAGGTATCAGTGGTAATGGGCATAGAACATACTATGGAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  93.2% (233/250)  IGHV3-64*05  137  ............C...T...A........GG...C........C.C............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  M  F  F  L  Q  M  S  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  D  S  D  D  F  G  D  
                    Query_8582   181  AGAACATGTTCTTTCTTCAAATGAGCAGTCTGAGAGCTGAGGACACGGCTCTGTATTACTGTGTGAAAGATTCGGATGACTTCGGTGACT  270
V  93.2% (233/250)  IGHV3-64*05  227  ......C.C.G.A.G...................................G...................--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  92.9% (13/14)    IGHD4-17*01  1    ----------------------------------------------------------------------------.....A........  14

                                      GT-------------------->                                  
                                      F  R  G  S  W  F  D  P  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_8582   271  TCCGGGGCAGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  327
J  97.9% (46/47)    IGHJ5*02     5    ----------..................................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_256252

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           333     1e-93
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GGAC	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGGACCTACCTTGACTAC	ARGTYLDY	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  N  F  N  F  Y  W  M  Y  W  V  R  Q  S  P  G  K  G  L  
                    Query_8583   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCAACTTCAATTTCTACTGGATGTACTGGGTCCGCCAATCTCCAGGGAAGGGGCTGA  90
V  92.8% (231/249)  IGHV3-74*01  47   .....................C..............C.....G.AG..........C..............G.................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      M  W  V  S  R  I  Y  R  D  G  I  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8583   91   TGTGGGTCTCACGTATTTATAGAGATGGGATTAGCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCC  180
V  92.8% (231/249)  IGHV3-74*01  137  .................A....T.......G........G.................................................A  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      Q  N  I  V  Y  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  R  G  T  Y  L  D  Y  W  
                    Query_8583   181  AGAACATTGTGTATCTGCAAATGAACAGTCTGAGAGACGAGGACACGGCTGTCTATTACTGTGCAAGAGGGACCTACCTTGACTACTGGG  270
V  92.8% (231/249)  IGHV3-74*01  227  ......CGC...........................C...............G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  95.7% (45/47)    IGHJ4*02     2    -------------------------------------------------------------------------....T............  18

                                                                    
                                      G  Q  G  T  P  V  T  V  S  S  
                    Query_8583   271  GCCAGGGAACCCCGGTCACCGTCTCCTCAG  300
J  95.7% (45/47)    IGHJ4*02     19   ............T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_45594

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCAC	GTATCACTATGACAATGGTGGTTATT	GGACCGCGGGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCACGTATCACTATGACAATGGTGGTTATTGGACCGCGGGGGCTTTTGATATC	ARTTYHYDNGGYWTAGAFDI	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8584   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCTTGAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (232/243)  IGHV4-59*01  49   ....................................A.C...................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  F  G  F  I  Y  Y  S  G  S  T  T  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_8584   91   TGGTTTGGTTTTATCTATTACAGTGGGAGCACCACCTACAACCCTTCCCTCAGGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAAG  180
V  95.5% (232/243)  IGHV4-59*01  139  ...A....G.A.......................A.........C.......A.....................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  T  Y  H  Y  D  N  G  G 
                    Query_8584   181  CAGTTCTCCCTGAAGCTGAGATCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAACCACGTATCACTATGACAATGGTGGT  270
V  95.5% (232/243)  IGHV4-59*01  229  ....................C..........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (22/26)    IGHD3-22*01  1    --------------------------------------------------------------------....T.......T.G.A.....  22

                                      GT------------------------>                                  
                                       Y  W  T  A  G  A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_8584   271  TATTGGACCGCGGGGGCTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  331
D  84.6% (22/26)    IGHD3-22*01  23   ....---------------------------------------------------------  26
J  97.8% (45/46)    IGHJ3*02     5    ---------------...........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_178612

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           353     1e-99
IGHD2-15*01                                                                                           14.1    10   
IGHJ5*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACTCCACCTTTAAAATTT	GATATTG	ATGGTTTCCCTGAGGCCCCCGCGAT	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACTCCACCTTTAAAATTTGATATTGATGGTTTCCCTGAGGCCCCCGCGATCTGGCTCGACCCC	ARTPPLKFDIDGFPEAPAIWLDP	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	257	31	0	89.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  S  S  V  K  V  S  C  R  A  S  G  G  T  F  G  T  Y
                    Query_8585   1    GCAGCTGGTGCAGTCTGGAGCTGAGATGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGGCTTCTGGAGGCACCTTCGGTACCTA  90
V  89.2% (257/288)  IGHV1-69*06  6    ..................G......G....................................A...................A.C.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  V  T  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  G  F  I  P  I  F  G  T  A  N  N  T  Q
                    Query_8585   91   TGGAGTGACCTGGGTGCGGCAGGCCCCGGGACAACGACTTGAGTGGATGGGAGGGTTCATCCCCATCTTTGGAACAGCAAACAACACACA  180
V  89.2% (257/288)  IGHV1-69*06  96   ..CTA.C.G.........A........T......G.G..................A.......T........T.........T..G....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  M  D  K  A  T  N  T  A  Y  M  E  L  S  R  L  T  S  D  D  T  A
                    Query_8585   181  GAAGTTCCAGGGCAGAGTCACGATCACCATGGACAAAGCCACGAACACAGCCTACATGGAGCTGAGCAGGCTGACTTCTGACGACACGGC  270
V  89.2% (257/288)  IGHV1-69*06  186  ........................T...GC.......T......G........................C....GA.....G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        I  Y  Y  C  A  R  T  P  P  L  K  F  D  I  D  G  F  P  E  A  P  A  I  W  L  D  P  W  G  Q
                    Query_8585   271  CATCTATTACTGTGCGAGGACTCCACCTTTAAAATTTGATATTGATGGTTTCCCTGAGGCCCCCGCGATCTGGCTCGACCCCTGGGGCCA  360
V  89.2% (257/288)  IGHV1-69*06  276  .G.G..............------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  100.0% (7/7)     IGHD2-15*01  3    -------------------------------------.......----------------------------------------------  9
J  97.9% (46/47)    IGHJ5*02     5    ---------------------------------------------------------------------....T................  25

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_8585   361  GGGAACCCTGGTCACCGTCTCCTCAG  386
J  97.9% (46/47)    IGHJ5*02     26   ..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_45599

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            344     6e-97
IGHD3-10*01                                                                                           10.3    125  
IGHJ3*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GAAT	TTATA	N/A	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGAATTTATAATGGTTTTGATGTC	ARGIYNGFDV	269	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	38	7	0	84.4
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	154	27	21	6	0	77.8
FR3-IMGT	155	268	114	105	9	0	92.1
CDR3-IMGT (germline)	269	275	7	7	0	0	100
Total	N/A	N/A	274	247	27	0	90.1


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  L  I  T  C  D  I  T  R  D  S  V  S  S  N  T  V  A  W  N  W  I  R 
                    Query_8586   2    CTGGTGAAACCCACACAGACCCTCTTAATCACCTGTGACATCACCAGGGACAGTGTCTCTAGTAACACTGTTGCTTGGAATTGGATCAGG  91
V  90.1% (247/274)  IGHV6-1*01   31   ........G...T.G..........C.C.........C....T..G................C....G..C.........C.........  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  R  S  D  Y  A  P  S  V  K  S  R 
                    Query_8586   92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATATTACAGATCCAAGTGGCGTTCTGACTATGCACCATCTGTGAAAAGTCGG  181
V  90.1% (247/274)  IGHV6-1*01   121  .........................................C.....G.........TA.AA...T......GT...............A  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  V  N  P  D  T  S  K  N  Q  F  S  L  H  L  N  S  V  T  P  E  D  T  A  I  Y  Y  C  A 
                    Query_8586   182  ATAACCGTCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTATTTATTATTGTGCA  271
V  90.1% (247/274)  IGHV6-1*01   211  ......A.....................................G..............................G.G.....C......  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------CDR3-IMGT--------->                                  
                                       R  G  I  Y  N  G  F  D  V  W  G  P  G  T  S  V  T  V  S  S  
                    Query_8586   272  AGAGGAATTTATAATGGTTTTGATGTCTGGGGCCCAGGGACATCGGTCACCGTCTCTTCAG  332
V  90.1% (247/274)  IGHV6-1*01   301  ....---------------------------------------------------------  304
                                       R                                                           
D  100.0% (5/5)     IGHD3-10*01  25   --------.....------------------------------------------------  29
J  91.7% (44/48)    IGHJ3*01     3    -------------...C.................A.......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_45598

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     2e-95
IGHD3-10*01                                                                                           10.3    117  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_8587   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-21*01  47   ............................................AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  E  Y  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_8587   91   AGTGGGTCTCATCCATTAGTAGTACTAGTGAATACATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  93.6% (233/249)  IGHV3-21*01  137  ........................G....AGT........C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_8587   181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTT  270
V  93.6% (233/249)  IGHV3-21*01  227  ............A......A..............................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8587   271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_178616

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           346     2e-97
IGHD2-2*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCCAGCACGTTATTTATGTGGTTCCC	GCTGCTAT	TTAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCCCAGCACGTTATTTATGTGGTTCCCGCTGCTATTTATTTTGACTAC	ARAQHVIYVVPAAIYFDY	246	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_8588   4    CCCTGAGACTCTCCTGTACCGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  94.4% (235/249)  IGHV4-31*02  50   .....TCC...A.......T......................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      P  E  W  I  G  Y  I  Y  Y  S  G  S  A  N  Y  N  S  S  L  K  S  R  V  T  I  S  V  D  A  S  
                    Query_8588   94   CGGAGTGGATTGGGTACATCTATTACAGTGGGAGCGCCAACTACAACTCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACGCGTCTA  183
V  94.4% (235/249)  IGHV4-31*02  140  T..................................A..T........C...................................A......  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  Q  F  S  L  Q  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  Q  H  V  I  Y  V  
                    Query_8588   184  AGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGCGAGCCCAGCACGTTATTTATGTGG  273
V  94.4% (235/249)  IGHV4-31*02  230  .................A......G..............................T.........A...---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       

                                      IMGT--------------------->                                 
                                      V  P  A  A  I  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_8588   274  TTCCCGCTGCTATTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  332
D  100.0% (8/8)     IGHD2-2*01   21   -----........----------------------------------------------  28
J  100.0% (42/42)   IGHJ4*02     6    -----------------..........................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_178617

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            39.1    2e-07
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	T	TTACGATTTTTTGAGTGGTTATT	N/A	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATTTACGATTTTTTGAGTGGTTATTACTTC	AIYDFLSGYYF	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	243	4	4	0	0	100
Total	N/A	N/A	240	231	9	0	96.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_8589   4    CCCTGAGACTCTCCTGTGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  96.2% (231/240)  IGHV4-34*01  50   .....TCC...A....C.........................................................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_8589   94   GGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTGAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  96.2% (231/240)  IGHV4-34*01  140  .................................................C........................................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  K  L  S  S  L  T  A  A  D  T  A  V  Y  Y  Y  A  I  Y  D  F  L  S  G  Y  Y  F  
                    Query_8589   184  AGTTCTCCCTGAAACTGAGCTCTCTGACCGCCGCGGACACGGCTGTGTATTACTATGCGATTTACGATTTTTTGAGTGGTTATTACTTCT  273
V  96.2% (231/240)  IGHV4-34*01  230  .............G.........G..............................G.....------------------------------  289
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  95.7% (22/23)    IGHD3-3*01   4    -------------------------------------------------------------...........G...........------  26
J  97.4% (38/39)    IGHJ4*02     10   ------------------------------------------------------------------------------------...A..  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8589   274  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.4% (38/39)    IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_178614

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            290     2e-80
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	21	8	0	72.4
CDR1-IMGT	30	53	27	20	4	3	74.1
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	249	219	27	3	88


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  
                    Query_8590   1    GGTCCCTGAGACTCTCCTGTATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGC  87
V  88.0% (219/249)  IGHV4-4*02   47   ..A.....TCC...A....CGC.........T...TCC......A..AG........GG.......................G.......  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  
                    Query_8590   88   TGGAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCA  177
V  88.0% (219/249)  IGHV4-4*02   137  .........................T......A................................G.......A................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G  
                    Query_8590   178  AGAATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGTGGGTAGCAGTGGCT  267
V  88.0% (219/249)  IGHV4-4*02   227  ....CC.GT..........G....GC..........................G................---------------------  295
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD6-19*01  6    -------------------------------------------------------------------------------...........  16

                                      ---------->                                
                                      W  L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_8590   268  GGCTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  310
D  100.0% (13/13)   IGHD6-19*01  17   ..-----------------------------------------  18
J  95.0% (38/40)    IGHJ4*02     7    ---......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_256258

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-22*01                                                                                           21.8    0.042
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCAC	GTATCACTACGACAATGGTGGTTATT	GGACCGCGGGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCACGTATCACTACGACAATGGTGGTTATTGGACCGCGGGGGCTTTTGATATC	ARTTYHYDNGGYWTAGAFDI	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8591   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCTTGAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (232/243)  IGHV4-59*01  49   ....................................A.C...................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  F  G  F  I  Y  Y  S  G  S  T  T  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_8591   91   TGGTTTGGTTTTATCTATTACAGTGGGAGCACCACCTACAACCCTTCCCTCAGGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAAG  180
V  95.5% (232/243)  IGHV4-59*01  139  ...A....G.A.......................A.........C.......A.....................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  T  Y  H  Y  D  N  G  G 
                    Query_8591   181  CAGTTCTCCCTGAAGCTGAGATCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAACCACGTATCACTACGACAATGGTGGT  270
V  95.5% (232/243)  IGHV4-59*01  229  ....................C..........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  80.8% (21/26)    IGHD3-22*01  1    --------------------------------------------------------------------....T....T..T.G.A.....  22

                                      GT------------------------>                                  
                                       Y  W  T  A  G  A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_8591   271  TATTGGACCGCGGGGGCTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  331
D  80.8% (21/26)    IGHD3-22*01  23   ....---------------------------------------------------------  26
J  97.8% (45/46)    IGHJ3*02     5    ---------------...........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_255780

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-16*01                                                                                           10.3    115  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGACGAGGGGCA	GGGGG	CGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGACGAGGGGCAGGGGGCGGTTGACTCT	ARVDEGQGAVDS	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  K  V  S  G  G  S  I  T  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8592   1    ACCCTGTCCCTCACCTGCAAGGTCTCTGGGGGCTCCATCACGACTTACTACTGGAGTTGGATCCGACAGCCCCCAGGGAAGGGACTGGAG  90
V  91.8% (224/244)  IGHV4-59*01  49   ...................CT........T..........GT.G............C........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  T  G  S  V  N  R  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_8592   91   TGGGTTGGGTATATCTATTACACTGGCAGTGTCAACCGCAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAC  180
V  91.8% (224/244)  IGHV4-59*01  139  ...A..................G...G..CAC....TA..............................A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  D  E  G  Q  G  A  V  D 
                    Query_8592   181  CAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTTGACGAGGGGCAGGGGGCGGTTGAC  270
V  91.8% (224/244)  IGHV4-59*01  229  ...............C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -----------------------------------------------------------------------------.....--------  22
J  92.9% (39/42)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8592   271  TCTTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  307
J  92.9% (39/42)    IGHJ4*02     12   .AC.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_92321

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*01                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_8593   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_8593   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  G  A  S  D  T  A
                    Query_8593   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGGGGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .......C.....................................C...........G......A........AA...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_8593   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGTCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  96.6% (56/58)    IGHJ6*01     6    ----------------------------------------------.......A.....................G..............  49

                                                    
                                        T  V  S  S  
                    Query_8593   361  CACCGTCTCCTCAG  374
J  96.6% (56/58)    IGHJ6*01     50   ..............  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_255782

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     2e-90
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCTCAG	AGTAGTACCAACTGTTATG	GGCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCAGAGTAGTACCAACTGTTATGGGCTTCTACTACTACGGTATGAACGTC	ARGLRVVPTVMGFYYYGMNV	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	240	117	109	5	3	93.2
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	229	16	3	92.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  G  G  S  F  S  T  Y  Y  W  T  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_8594   1    ACCCTGTCCCTCACCTGCACTGTCTATGGTGGGTCCTTCAGCACTTACTACTGGACCTGGATCCGCCAGACCCCAGGGAAGGGGCTGGAG  90
V  92.3% (229/248)  IGHV4-34*01  49   ..................G......................TGG...........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><-----------------------------------------------------FR3
                                       W  I  G  E  I  Y  V  G  G  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_8594   91   TGGATTGGGGAAATCTATGTTGGTGGAGGCACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAG  180
V  92.3% (229/248)  IGHV4-34*01  139  ...............A..CA.A.....A.....---...................................A..................  225
                                       W  I  G  E  I  N  H  S  G  S  T     N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                      -IMGT------------------------------------------------------><-------------------------CDR3
                                       N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  G  L  R  V  V  P  T  V 
                    Query_8594   181  AACCAGTTCTCCCTGAACCTGAGCTCTGTGACCGCCGCGGACACGGCTATGTACTACTGCGCGAGAGGCCTCAGAGTAGTACCAACTGTT  270
V  92.3% (229/248)  IGHV4-34*01  226  .................G..............................G....T.....T........----------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                      
D  89.5% (17/19)    IGHD2-2*01   11   --------------------------------------------------------------------------..........G...C.  26

                                      -IMGT------------------------>                                 
                                       M  G  F  Y  Y  Y  G  M  N  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8594   271  ATGGGCTTCTACTACTACGGTATGAACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
D  89.5% (17/19)    IGHD2-2*01   27   ...------------------------------------------------------------  29
J  98.2% (54/55)    IGHJ6*02     8    --------................G......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_46021

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            336     1e-94
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTTTG	ACTATGATAGTCGTGGCTTTTAC	AGACGTTCTA	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTTTGACTATGATAGTCGTGGCTTTTACAGACGTTCTAACTCCTTTGACTTC	ARGFDYDSRGFYRRSNSFDF	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	104	10	0	91.2
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	230	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_8595   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTACTAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.9% (230/245)  IGHV4-4*01   49   ..................G.....................GC.G......C.......................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  Q  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K 
                    Query_8595   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCCAGTACAACCCGTCACTCAAGAGTCGAGTCACGATATCAGTAGACAGGTCCAAG  180
V  93.9% (230/245)  IGHV4-4*01   139  ....................................A.C...........C.................C.............A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------------CDR3
                                       N  Q  I  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  F  D  Y  D  S  R  G 
                    Query_8595   181  AACCAGATCTCCCTGAGGTTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGGCTTTGACTATGATAGTCGTGGC  270
V  93.9% (230/245)  IGHV4-4*01   229  ......T.........A.C....C...............................G.........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  87.0% (20/23)    IGHD3-22*01  6    -------------------------------------------------------------------------...........A....T  22

                                      -IMGT------------------------>                                  
                                       F  Y  R  R  S  N  S  F  D  F  W  G  R  G  T  L  V  A  V  S  S  
                    Query_8595   271  TTTTACAGACGTTCTAACTCCTTTGACTTCTGGGGCCGGGGAACCCTGGTCGCTGTCTCCTCAG  334
D  87.0% (20/23)    IGHD3-22*01  23   .A....----------------------------------------------------------  28
J  89.6% (43/48)    IGHJ4*02     1    ----------------...A........A........A.............A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_255784

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         329     3e-92
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGG	AGTAGTGGTTATTAC	ATCATCAACTTCTA	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGGAGTAGTGGTTATTACATCATCAACTTCTACGACCCC	ARDGSSGYYIINFYDP	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  S  A  S  G  F  R  F  S  D  Y  A  M  H  W  V  R  L  A  P  G  K  G  L  
                    Query_8596     1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCCGCTTCAGTGACTATGCTATGCACTGGGTCCGCCTGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-30-3*01  47   ....................G..............AC.......AG.......................A.........C..........  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  T  T  I  S  Y  D  G  S  S  K  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8596     91   AGTGGGTGACAACAATATCATATGATGGAAGCAGTAAAAATTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-30-3*01  137  ........G..GTT...................A....T.C...........C.....................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                        K  D  T  V  H  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  D  G  S  S  G  Y  Y  
                    Query_8596     181  AGGACACGGTGCATCTGCAAATGAACAGCCTGAGACCTGAAGACACGGCTGTGTATTACTGTGCGAGAGACGGGAGTAGTGGTTATTACA  270
V  92.0% (230/250)  IGHV3-30-3*01  227  ..A.....C..T.......................G....G.............................--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01    14   --------------------------------------------------------------------------...............-  28

                                        T------------------>                                  
                                        I  I  N  F  Y  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8596     271  TCATCAACTTCTACGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (41/41)   IGHJ5*02       11   -------------.........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_255785

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           327     9e-92
IGHD4-17*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCCCCCTCCTGTG	GGTGACTAC	GTCAGCGGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCCCCCTCCTGTGGGTGACTACGTCAGCGGCCTTGACTAT	AKPPPVGDYVSGLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	228	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  T  T  S  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8597   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCATGTTCACCACCTCTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.3% (228/247)  IGHV3-30*18  47   ......................A.............CC....GT.G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8597   91   AGTGGGTGGCAGTCATCTCATATGATGGAAGTAATACGTACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGGGACAATTCCA  180
V  92.3% (228/247)  IGHV3-30*18  137  .............T..A...................AA.....T...................................A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  S  L  Q  M  S  S  L  R  P  E  D  S  G  V  Y  Y  C  A  K  P  P  P  V  G  D  Y  
                    Query_8597   181  AGAACACCCTGTCTCTGCAAATGAGCAGCCTGAGACCTGAGGACTCGGGTGTGTATTACTGTGCGAAGCCCCCTCCTGTGGGTGACTACG  270
V  92.3% (228/247)  IGHV3-30*18  227  .......G....A...........A..........G........A...C..................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD4-17*01  8    --------------------------------------------------------------------------------.........-  16

                                      ---------------->                                  
                                      V  S  G  L  D  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_8597   271  TCAGCGGCCTTGACTATTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  321
J  95.2% (40/42)    IGHJ4*02     7    ---------.......C................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_255786

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            397     8e-113
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  R  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_8598  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTAGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.8% (272/290)  IGHV1-8*02  6    .....................................G.......................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_8598  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.8% (272/290)  IGHV1-8*02  96   ........A.........................................................C.......................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_8598  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAGGACACGGC  270
V  93.8% (272/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A..................C..........G.GAT.............  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8598  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.8% (272/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_46025

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            383     1e-108
IGHD6-6*01                                                                                            14.1    8.9   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAGGC	GCAGTTCGTC	GCGAATGAGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAGGCGCAGTTCGTCGCGAATGAGCCTTGACTCC	ARDRRSSSRMSLDS	264	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	77	27	23	4	0	85.2
FR2-IMGT	78	128	51	49	2	0	96.1
CDR2-IMGT	129	149	21	21	0	0	100
FR3-IMGT	150	263	114	109	5	0	95.6
CDR3-IMGT (germline)	264	271	8	8	0	0	100
Total	N/A	N/A	271	258	13	0	95.2


Alignments

                                     <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                        G  L  V  K  P  S  G  T  L  S  L  T  C  G  V  S  D  A  S  I  S  S  S  D  W  W  I  W  V  
                    Query_8599  1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCACCTGCGGTGTCTCTGACGCCTCCATCAGCAGTAGTGACTGGTGGATTTGGGTCC  90
V  95.2% (258/271)  IGHV4-4*02  26   ................T.........................C........GT.G................A.........G........  115
                                        G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                     --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                     R  Q  S  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  E  S  R  V  
                    Query_8599  91   GCCAGTCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCGAGAGTCGAGTCA  180
V  95.2% (258/271)  IGHV4-4*02  116  .....C.......................................................................A............  205
                                     R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                     ----------------------FR3-IMGT----------------------------------------------------><------
                                     T  I  S  V  E  K  S  K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  
                    Query_8599  181  CCATATCAGTAGAGAAGTCCAAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCCTGTATTACTGTGCGAGAG  270
V  95.2% (258/271)  IGHV4-4*02  206  .............C.........................A.....G.........................G..................  295
                                     T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  

                                     ----------CDR3-IMGT--------------->                                  
                                     D  R  R  S  S  S  R  M  S  L  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8599  271  ACAGGCGCAGTTCGTCGCGAATGAGCCTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
V  95.2% (258/271)  IGHV4-4*02  296  .--------------------------------------------------------------------  296
                                                                                                          
D  90.0% (9/10)     IGHD6-6*01  8    ------....C.....-----------------------------------------------------  17
J  97.6% (41/42)    IGHJ4*02    7    ---------------------------......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_255788

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACATG	ATTACCATGAT	TCCA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAACATGATTACCATGATTCCAGATGCTTTTGATATC	ARDNMITMIPDAFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  S  S  I  N  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  A 
                    Query_8600   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTAGCTCCATCAACAGTGGAGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGCC  90
V  94.4% (237/251)  IGHV4-31*03  49   ..............................G.........G......T........................................G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  D  S  G  G  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_8600   91   CTGGAGTGGATTGGATACATCTATGACAGTGGGGGCACCTCCTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCACTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ..............G.........T........A......A...........................T.........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  D  N  M  I  T  M  I 
                    Query_8600   181  AGGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACTGTCGCGGACACGGCCGTATATTACTGTGCGAGAGATAACATGATTACCATGATT  270
V  94.4% (237/251)  IGHV4-31*03  229  .A...................C...............C...............G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD3-22*01  3    ------------------------------------------------------------------------------.....T.....-  13

                                      ----------------->                                  
                                       P  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8600   271  CCAGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  100.0% (49/49)   IGHJ3*02     2    ---.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_102320

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           308     4e-86
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGCA	TCGTGGTAC	CAGTGGCTGG	CAAACC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATCGTGGTACCAGTGGCTGGCAAACCGATGCTTTTGAGATC	ARHRGTSGWQTDAFEI	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	221	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  Y  T  V  S  G  G  S  I  S  S  D  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8601   1    ACCCTGTCCCTCACCTACACCGTCTCTGGTGGCTCCATCAGCAGTGACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.2% (221/245)  IGHV4-59*08  49   ................G...T....................T...T............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  S  I  Y  Y  Y  G  G  I  N  Y  N  P  S  F  E  T  R  V  T  I  S  I  H  T  S  R  Q 
                    Query_8601   91   TGGATTGCGTCTATCTATTACTATGGGGGCATAAACTACAACCCCTCCTTCGAGACTCGAGTCACCATATCAATACACACGTCCAGGCAG  180
V  90.2% (221/245)  IGHV4-59*08  139  .......G..A..........AG....A...CC...............C..A...G................G..G.........A.A.C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  Y  V  T  A  T  D  S  A  V  Y  Y  C  A  R  H  R  G  T  S  G  W  Q  T 
                    Query_8601   181  CAGTTCTCTCTGAAGCTGAGCTATGTGACCGCCACAGACTCGGCCGTGTATTACTGTGCGAGGCATCGTGGTACCAGTGGCTGGCAAACC  270
V  90.2% (221/245)  IGHV4-59*08  229  ........C.............C..........G.....A......................A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-19*01  9    --------------------------------------------------------------------------..........------  18

                                      -------------->                                  
                                       D  A  F  E  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8601   271  GATGCTTTTGAGATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  319
J  98.0% (48/49)    IGHJ3*02     2    ...........T.....................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_102327

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           417     6e-119
IGHD3-22*01                                                                                           23.8    0.012 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	GSFARVL*YYWS*SF*Y	285	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	146	52	51	0	1	98.1
CDR2-IMGT	147	170	24	24	0	0	100
FR3-IMGT	171	284	114	110	4	0	96.5
CDR3-IMGT (germline)	285	291	7	6	1	0	85.7
Total	N/A	N/A	291	281	9	1	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F
                    Query_8602   1    GCAGCTGGTGCAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTT  90
V  96.6% (281/291)  IGHV3-33*01  6    ..........G..........................................................................AG..A  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><---------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                        G  M  H  W  V  R  Q  A  P  G  K  G  A  G  V  G  G  S  Y  M  V  *  W  K  *  *  I  L  C  R
                    Query_8602   91   TGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAG  180
V  96.6% (281/291)  IGHV3-33*01  96   .................................-........................................................  184
                                        G  M  H  W  V  R  Q  A  P  G  K   G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                        L  R  E  G  P  I  H  H  L  Q  R  Q  C  Q  E  H  V  V  S  A  N  E  Q  P  G  S  R  G  H  G
                    Query_8602   181  ACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGG  270
V  96.6% (281/291)  IGHV3-33*01  185  ......................................T...........C.......................A...............  274
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  

                                      -------------><----------------------CDR3-IMGT--------------------->                      
                                        C  I  L  L  C  G  S  F  A  R  V  L  *  Y  Y  W  S  *  S  F  *  Y  L  G  P  R  D  N  T  H
                    Query_8602   271  CTGTATATTACTGTGCGGGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCA  360
V  96.6% (281/291)  IGHV3-33*01  275  ....G............A...---------------------------------------------------------------------  295
                                      A  V  Y  Y  C  A  R                                                                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------..........G..G....----------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------------------------------------------------....G............................GG...  38

                                                  
                                        R  L  F   
                    Query_8602   361  CCGTCTCTTCAG  372
J  94.0% (47/50)    IGHJ3*02     39   ............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_102326

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8603   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8603   91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_8603   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  95.5% (231/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8603   271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_102325

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_8604   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.0% (222/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  C  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_8604   91   TGGGTTGGATATATCTATTGTAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.0% (222/244)  IGHV4-59*01  139  ...A....G..........AC..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y 
                    Query_8604   181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTAC  270
V  91.0% (222/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD2-2*01   8    ---------------------------------------------------------------------........T........----  24
J  88.5% (46/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_8604   271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  318
J  88.5% (46/52)    IGHJ6*02     15   ...GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_95875

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           343     2e-96
IGHD1-1*01                                                                                            10.3    113  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTA	AC	GTACA	CGGGGCT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AACGTACACGGGGCTTAC	NVHGAY	249	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	249	1	1	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  Y  G  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8605   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTAGTTTCAGTTATGGCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-15*01  47   .......T..........................C.C.......A.C.C........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  N  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  I  I  A  R  D  
                    Query_8605   91   AGTGGGTTGGCCGTATTAAAAGCAAAAATGATGGTGGGACAACAGACTACGCCGCACCCGTGAAAGGCAGATTCATCATCGCAAGAGATG  180
V  94.0% (234/249)  IGHV3-15*01  137  ...........................C........................T......................C....T.........  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----CDR3-IMGT--->    
                                      D  S  R  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  N  V  H  G  A  Y  W  
                    Query_8605   181  ATTCAAGAAACACTCTCTATCTGCAAATGAACAGCCTGAAAACCGAAGACACAGCCGTGTATTACTGTAACGTACACGGGGCTTACTGGG  270
V  94.0% (234/249)  IGHV3-15*01  227  ......A......G..G.............................G......................---------------------  295
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  100.0% (5/5)     IGHD1-1*01   2    -----------------------------------------------------------------------.....--------------  6
J  100.0% (37/37)   IGHJ4*02     12   -----------------------------------------------------------------------------------.......  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_8605   271  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  300
J  100.0% (37/37)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_95874

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           346     2e-97
IGHD3-10*01                                                                                           12.2    37   
IGHJ4*03                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ4*03	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAACA	TGTCATGTA	TCGGGG	GGGTCGCTTGGA	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATGTCATGTATCGGGGGGGTCGCTTGGACTACTTTGACTCC	AKHVMYRGGRLDYFDS	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	66	8	0	89.2
CDR1-IMGT	78	101	24	17	7	0	70.8
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	18	6	0	75
FR3-IMGT	177	290	114	103	11	0	90.4
CDR3-IMGT (germline)	291	298	8	7	1	0	87.5
Total	N/A	N/A	295	258	37	0	87.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  P  L  R  I  S  C  K  G  S  G  N  T  F  T  
                    Query_8606   4    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGCCTCTGAGGATTTCCTGTAAGGGGTCTGGAAACACTTTCACCA  93
V  87.5% (258/295)  IGHV5-51*01  2    ....G.....G.......................A........G...T......A...C...........T......T...GC..T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  S  W  I  A  W  V  R  Q  L  P  E  K  G  L  E  W  M  G  I  V  F  P  D  D  S  D  T  I  Y  
                    Query_8606   94   CCTCGTGGATCGCCTGGGTGCGCCAGCTGCCCGAGAAAGGCCTGGAGTGGATGGGCATCGTCTTTCCTGATGATTCAGACACCATATACA  183
V  87.5% (258/295)  IGHV5-51*01  92   G..AC.......G.............A......G.....................G...A...A.....G...C..T..T....G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  Q  G  L  I  T  I  S  A  D  K  S  L  K  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_8606   184  ATCCGTCCTTCCAAGGCCTGATCACCATCTCGGCCGACAAGTCCCTCAAGACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACC  273
V  87.5% (258/295)  IGHV5-51*01  182  GC................A.G..........A............A...GC.......................................A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      P  A  I  Y  Y  C  A  K  H  V  M  Y  R  G  G  R  L  D  Y  F  D  S  W  G  Q  G  T  L  V  I  
                    Query_8606   274  CCGCCATATATTACTGTGCGAAACATGTCATGTATCGGGGGGGTCGCTTGGACTACTTTGACTCCTGGGGCCAAGGGACCCTGGTCATCG  363
V  87.5% (258/295)  IGHV5-51*01  272  .......G.............G...-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD3-10*01  14   ----------------------------------......--------------------------------------------------  19
J  91.5% (43/47)    IGHJ4*03     2    ----------------------------------------------------...........A.......................C..  39

                                               
                                      A  S  S  
                    Query_8606   364  CCTCTTCAG  372
J  91.5% (43/47)    IGHJ4*03     40   T...C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_95877

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           355     3e-100
IGHD3-10*01                                                                                           14.1    9.2   
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCCGAATAGGGGGCTCGTGCGACCTACGG	TCGGGGA	CCATTTCGGTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCCGAATAGGGGGCTCGTGCGACCTACGGTCGGGGACCATTTCGGTCACTACTACTACGGTATGGACGAC	AAPNRGLVRPTVGDHFGHYYYGMDD	243	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  T  W  V  R  R  G  P  G  K  G  L  
                    Query_8607   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACCTTTAGCAGCTATGCCATGACCTGGGTCCGCCGGGGTCCAGGGAAGGGGCTGG  90
V  96.3% (236/245)  IGHV3-23*01  47   ...............................A.........................G...........A..C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8607   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTAGTAACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.3% (236/245)  IGHV3-23*01  137  .............................G...G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  A  P  N  R  G  L  V  R  
                    Query_8607   181  AGAACACCCTGTATCTGCAAATGAACAGCCTGAGAGCAGACGACACGGCCGTATATTACTGTGCGGCCCCGAATAGGGGGCTCGTGCGAC  270
V  96.3% (236/245)  IGHV3-23*01  227  .......G.............................C..G........................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      -----CDR3-IMGT-------------------------------->                                 
                                      P  T  V  G  D  H  F  G  H  Y  Y  Y  G  M  D  D  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8607   271  CTACGGTCGGGGACCATTTCGGTCACTACTACTACGGTATGGACGACTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  350
D  100.0% (7/7)     IGHD3-10*01  14   ------.......-------------------------------------------------------------------  20
J  98.2% (55/56)    IGHJ6*02     7    ------------------------.....................T..................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_95876

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           293     2e-81
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	215	28	0	88.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_8608   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAGT  93
V  88.5% (215/243)  IGHV4-59*01  50   .....TCC...A.........................C...A..T.........GC....................G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  P  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N  
                    Query_8608   94   GGATTGGCTATCCCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAATC  183
V  88.5% (215/243)  IGHV4-59*01  140  .......G...AT........G.................A..C.......A.....................TA...A..........C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P  
                    Query_8608   184  AGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCCT  273
V  88.5% (215/243)  IGHV4-59*01  230  ..........G...C....C...........T............G.G....A...........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD7-27*01  4    ----------------------------------------------------------------........------------------  11
J  95.7% (44/46)    IGHJ5*02     6    -----------------------------------------------------------------------------.............  18

                                                                       
                                      W  G  Q  G  A  L  V  S  V  S  S  
                    Query_8608   274  GGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  306
J  95.7% (44/46)    IGHJ5*02     19   ...........A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_95871

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           325     3e-91
IGHD3-9*01                                                                                            25.7    0.003
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTTGCCTGGAAT	TTACGATTCTGTGACTGGTTAT	CAAGTGAATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGCCTGGAATTTACGATTCTGTGACTGGTTATCAAGTGAATGCCTAC	ARLPGIYDSVTGYQVNAY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  T  F  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8609   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATACTTTCTACTGGACCTGGATCCGTCAGCCCCCAGGAAAGGGACTGGAG  90
V  93.0% (225/242)  IGHV4-59*01  49   ........................................G..G..A........G.........G...........G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  H  S  G  R  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  L  N 
                    Query_8609   91   TGGATTGGGTATATCTATCATAGTGGGAGAACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCGTATCAGTAGACACATCTTTGAAC  180
V  93.0% (225/242)  IGHV4-59*01  139  ..................T.C........C....................................A.............G..CAA....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  P  G  I  Y  D  S  V  T 
                    Query_8609   181  CAGTTCTCCCTGAGACTGAGCTCCGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTTGCCTGGAATTTACGATTCTGTGACT  270
V  93.0% (225/242)  IGHV4-59*01  229  .............AG........T......................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  86.4% (19/22)    IGHD3-9*01   4    --------------------------------------------------------------------------.......AT.T.....  19

                                      -------------------->                                 
                                       G  Y  Q  V  N  A  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_8609   271  GGTTATCAAGTGAATGCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  324
D  86.4% (19/22)    IGHD3-9*01   20   ......------------------------------------------------  25
J  100.0% (37/37)   IGHJ4*02     11   -----------------.....................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_95870

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            318     6e-89
IGHD3-10*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTGAC	TATTACGATGGTTC	AGGCAGGTCTTCTGGGGGCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTGACTATTACGATGGTTCAGGCAGGTCTTCTGGGGGCCGACTAC	ASLTITMVQAGLLGADY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	24	3	0	88.9
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	17	4	0	81
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  S  V  S  G  V  S  I  S  T  S  N  W  W  T  W  V  R  Q  P  P  G  K  G  
                    Query_8610   1    GGTCCCTGAGACTCTCCTGCTCTGTCTCTGGTGTCTCCATCAGTACTAGTAACTGGTGGACTTGGGTCCGCCAGCCTCCAGGGAAGGGGC  90
V  91.1% (225/247)  IGHV4-4*02   47   ..A.....TCC...A.....G............G.........C.G..............G...............C.............  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  L  H  S  G  T  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  I  D  K  S  
                    Query_8610   91   TGGAGTGGATTGGGGAAATCCTTCACAGTGGGACCACCAACTACAACCCGTCCCTCAGGAGTCGAGTCACCATCTCAATAGACAAGTCGA  180
V  91.1% (225/247)  IGHV4-4*02   137  ....................TA...T.......G.......................A...............A...G..........C.  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  T  I  T  M  V  Q  
                    Query_8610   181  AGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGCCTGACTATTACGATGGTTCAGG  270
V  91.1% (225/247)  IGHV4-4*02   227  ..................A.....G...........................G..............-----------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD3-10*01  2    -------------------------------------------------------------------------......T.......---  15

                                      GT-------------------->                                  
                                      A  G  L  L  G  A  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_8610   271  CAGGTCTTCTGGGGGCCGACTACTGGGGCCAGGGGTCCCTAGTCACCGTCTCCTCAG  327
J  92.5% (37/40)    IGHJ4*02     9    -----------------.................AA....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_95873

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     1e-109
IGHD6-6*01                                                                                            14.1    9.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTC	ATTREQLVPIFDF	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	70	4	0	94.6
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	293	4	4	0	0	100
Total	N/A	N/A	291	269	22	0	92.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  L  T  
                    Query_8611   3    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGCAAGGGCTCTGGATATAGCTTAACCA  92
V  92.4% (269/291)  IGHV5-51*01  2    ....G.....G.....................................................T.....T........C.....T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  V  P  G  K  G  L  E  W  I  G  I  I  Y  P  A  D  S  E  T  K  Y  
                    Query_8611   93   GTTATTGGATCGCCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATTGGGATCATCTATCCTGCTGACTCTGAAACCAAATACA  182
V  92.4% (269/291)  IGHV5-51*01  92   .C..C.......G.............A.........................G................G.........T....G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  S  S  S  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_8611   183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCGGCCGACAAGTCCAGCAGCTCCGCCTTCTTGCAGTGGAGCAGCCTGAAGGCCTCGGACC  272
V  92.4% (269/291)  IGHV5-51*01  182  ...............................A.............T....A......A.C.............................A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      P  A  I  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8611   273  CCGCCATATATTATTGTGCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTCTGGGGGCAGGGAACCCTGGTCACCGTCTCCTCAG  362
V  92.4% (269/291)  IGHV5-51*01  272  .......G.....C.......---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -----------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------.......A......C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_95872

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGTGAGGAAGGA	TACTATGATACTAGTGGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGTGAGGAAGGATACTATGATACTAGTGGTTATTCGGACTAT	AKDGEEGYYDTSGYSDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  T  P  G  K  G  L  
                    Query_8612   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGATATGCCATGTCCTGGGTCCGCCAGACTCCAGGGAAGGGCCTGG  90
V  93.2% (233/250)  IGHV3-23*01  47   ...........................................C..C.........AG.............G.............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  V  S  G  S  G  G  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8612   91   AGTGGGTCTCAACAGTGAGTGGTAGTGGAGGTGGCACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  ...........G.TA.T...........T...A..........C..............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  T  E  D  T  A  I  Y  Y  C  A  K  D  G  E  E  G  Y  Y  
                    Query_8612   181  AGAACACGCTGTATTTGCAAATGGACAGCCTGAGAACCGAGGACACGGCCATATATTACTGTGCGAAAGATGGTGAGGAAGGATACTATG  270
V  93.2% (233/250)  IGHV3-23*01  227  ..............C........A...........G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.5% (21/22)    IGHD3-22*01  5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                      D  T  S  G  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8612   271  ATACTAGTGGTTATTCGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.5% (21/22)    IGHD3-22*01  12   ...G...........------------------------------------------  26
J  97.5% (39/40)    IGHJ4*02     9    -----------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_321909

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           349     2e-98
IGHD5-18*01                                                                                           18.0    0.60 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAAG	CCAG	GGACACACCTATGGT	CATAGACACGTCA	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGCCAGGGACACACCTATGGTCATAGACACGTCAAACTGGTTCGACCCC	AEARDTPMVIDTSNWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8613   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-23*01  47   .........................................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  V  S  T  Y  Y  V  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_8613   91   AGTGGGTCTCAGGTATAAGTGGTAGTGGTGTAAGCACATACTACGTAGACTCCGTGAAGGGCCGCTTCACCGTCTCCAGAGACAATGCCA  180
V  94.8% (236/249)  IGHV3-23*01  137  ............C...T.............GT.............C..................G......A..............T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  A  A  I  Y  Y  C  A  E  A  R  D  T  P  M  V  
                    Query_8613   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACGCGGCCATATATTACTGTGCGGAAGCCAGGGACACACCTATGGTCA  270
V  94.8% (236/249)  IGHV3-23*01  227  ........C...................................A.....G..............A...---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  86.7% (13/15)    IGHD5-18*01  3    -------------------------------------------------------------------------...T...G.......--  17

                                      IMGT--------------------->                                  
                                      I  D  T  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8613   271  TAGACACGTCAAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
J  100.0% (49/49)   IGHJ5*02     3    -----------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_95878

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           392     2e-111
IGHD3-9*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	CT	CGATCTTATGATTGGTTATTATAAC	CTTGCCCAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGACTCGATCTTATGATTGGTTATTATAACCTTGCCCAG	ARLDLMIGYYNLAQ	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	63	7	0	90
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  R  P  G  E  S  L  T  I  S  C  V  A  S  G  Y  T  F  S  T  Y
                    Query_8614   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAGGCCGGGGGAGTCTCTGACGATCTCCTGTGTGGCTTCTGGATACACTTTTTCCACCTA  90
V  93.4% (270/289)  IGHV5-51*03  6    ....................C........A..A.................A..........AA..G...........GC...A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  S  Y  S  P
                    Query_8614   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGTAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGTTACAGTCC  180
V  93.4% (270/289)  IGHV5-51*03  96   ........G.....................G.............G....................................A.....C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8614   181  GTCCTTCCAAGGCCAGGTCACCATTTCAGCCGACAAGTCCATCAGAACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (270/289)  IGHV5-51*03  186  ........................C....................C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  L  D  L  M  I  G  Y  Y  N  L  A  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8614   271  CATGTATTACTGTGCAAGACTCGATCTTATGATTGGTTATTATAACCTTGCCCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.4% (270/289)  IGHV5-51*03  276  ...............G...----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  88.0% (22/25)    IGHD3-9*01   7    ---------------------....A..T...C.............-------------------------------------------  31
J  100.0% (34/34)   IGHJ4*02     15   -------------------------------------------------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_219599

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_8615   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.8% (277/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_8615   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_8615   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8615   271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.8% (277/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_8615   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_219594

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           339     2e-95
IGHD3-3*01                                                                                            21.8    0.042
IGHJ5*01                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGATGGGGAAGGG	ACGATTTTTGG	GATGGGGTGAAGG	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGATGGGGAAGGGACGATTTTTGGGATGGGGTGAAGGTCGACTCC	ARGRWGRDDFWDGVKVDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  Y  E  M  N  W  V  R  Q  T  P  G  K  G  L  
                    Query_8616   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCACCTTCAATAATTATGAAATGAACTGGGTCCGCCAGACTCCGGGGAAGGGGTTGG  90
V  93.6% (233/249)  IGHV3-48*03  47   ......................A...................G..G.........................G....A.........C...  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  T  R  Y  Y  G  D  S  V  K  G  R  F  T  I  S  K  D  S  A  
                    Query_8616   91   AGTGGGTCTCATACATTAGTAGTAGTGGTAGTACCAGATACTACGGAGACTCTGTGAAGGGCCGATTCACCATCTCCAAAGACAGCGCCA  180
V  93.6% (233/249)  IGHV3-48*03  137  .......T............................T........C................................G.....A.....  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  I  Y  Y  C  A  R  G  R  W  G  R  D  D  
                    Query_8616   181  AGAACTCACTGTATCTACAAATGGATAGCCTGAGAGTCGAGGACACGGCTATTTATTACTGTGCGAGAGGCCGATGGGGAAGGGACGATT  270
V  93.6% (233/249)  IGHV3-48*03  227  ................G......A.C..........C.............G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-3*01   6    ------------------------------------------------------------------------------------......  11

                                      IMGT--------------------->                                  
                                      F  W  D  G  V  K  V  D  S  W  G  Q  G  S  L  V  P  V  S  S  
                    Query_8616   271  TTTGGGATGGGGTGAAGGTCGACTCCTGGGGCCAGGGATCCCTGGTCCCCGTCTCCTCAG  330
D  100.0% (11/11)   IGHD3-3*01   12   .....-------------------------------------------------------  16
J  92.9% (39/42)    IGHJ5*01     10   ------------------................A...A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_219597

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           397     8e-113
IGHD5-12*01                                                                                           18.0    0.65  
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGGGC	AGTGGCTAC	TACGGGGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGCAGTGGCTACTACGGGGGTGCTTTTGATATC	ARMGSGYYGGAFDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	271	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  S  H 
                    Query_8617   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGTCAT  91
V  94.1% (271/288)  IGHV1-18*01  7    .................................................A....................................CT..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  L  A  P  G  Q  G  L  E  W  M  G  Y  I  T  N  Y  N  N  N  T  D  Y  A  Q 
                    Query_8617   92   GGTATCAGCTGGGTGCGACTGGCCCCTGGACAAGGGCTTGAGTGGATGGGATACATCACCAATTACAATAATAACACAGACTATGCACAG  181
V  94.1% (271/288)  IGHV1-18*01  97   ...................A................................GG....G.GC.......GG.......A...........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  N  L  R  S  D  D  T  A 
                    Query_8617   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCTTACATGGAGCTGAGGAATCTGAGATCTGACGACACGGCC  271
V  94.1% (271/288)  IGHV1-18*01  187  ...C..............................................C................GC.....................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  F  Y  C  A  R  M  G  S  G  Y  Y  G  G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8617   272  GTGTTTTACTGTGCGAGAATGGGCAGTGGCTACTACGGGGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  359
V  94.1% (271/288)  IGHV1-18*01  277  ....A.............----------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (9/9)     IGHD5-12*01  9    ------------------------.........-------------------------------------------------------  17
J  100.0% (47/47)   IGHJ3*02     4    -----------------------------------------...............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_219596

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*03                                                                                           321     6e-90
IGHD4-17*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*03	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGAATAC	AG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGAATACAGCAACTGGATCGACCCC	ARDSGEYSNWIDP	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	228	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  V  S  S  A  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_8618   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCGTCAGCAGTGCTAGTTACTACTGGACATGGATCCGGCAGCCCCCAGGAAAGGGG  90
V  90.8% (228/251)  IGHV4-61*03  49   ...................C...........G..............G..............GC....................G.....A  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  N  R  G  R  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  A  D  T  S 
                    Query_8618   91   CTGGAGTGGATCGGTAATATCTATAACAGAGGGCGCACCAATTATAATCCCTCCCTCCAAAGTCGAGTCACCATATCAGCAGACACATCC  180
V  90.8% (228/251)  IGHV4-61*03  139  ...........T..GT........T....T...A.......C..C..C.........A.G...................T......G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  G  E  Y  S  N 
                    Query_8618   181  AAGAACCACTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATTCCGGTGAATACAGCAAC  270
V  90.8% (228/251)  IGHV4-61*03  229  .....................C...G...........................G.................-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD4-17*01  7    --------------------------------------------------------------------------......C...------  16
J  92.0% (46/50)    IGHJ5*02     2    --------------------------------------------------------------------------------------....  5

                                      ----------->                                  
                                       W  I  D  P  W  G  Q  G  A  L  V  I  V  S  S  
                    Query_8618   271  TGGATCGACCCCTGGGGCCAGGGAGCCCTGGTCATTGTCTCCTCAG  316
J  92.0% (46/50)    IGHJ5*02     6    ...T....................A.........CC..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_219591

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           304     9e-85
IGHD2-21*02                                                                                           10.3    118  
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGCC	ARLMSRLNYGMAA	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	220	26	0	89.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  
                    Query_8619   1    AGTCCCTGAGACTCTCCTGTTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGG  90
V  89.4% (220/246)  IGHV4-59*08  47   ..A.....TCC...A....CA............G......C.G..G................A....G......................  136
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  E  S  V  D  T  S  K  
                    Query_8619   91   AATGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGAATCAGTAGACACGTCCAAGA  180
V  89.4% (220/246)  IGHV4-59*08  137  .G.......G.........T.....T.....CA.....T...................T........CAT....................  226
                                      E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                      3-IMGT----------------------------------------------------><--------------CDR3-IMGT-------
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  
                    Query_8619   181  ACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCA  270
V  89.4% (220/246)  IGHV4-59*08  227  .................C...............................G................------------------------  292
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (5/5)     IGHD2-21*02  17   ---------------------------------------------------------------------------.....----------  21
J  90.0% (45/50)    IGHJ6*02     13   ---------------------------------------------------------------------------------.......T.  21

                                      ------->                                 
                                      M  A  A  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_8619   271  TGGCCGCCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  311
J  90.0% (45/50)    IGHJ6*02     22   ...A..T................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_219593

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_8620   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_8620   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_8620   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_8620   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_255077

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           310     1e-86
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAAG	AGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQEWLPGDWYFDL	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	220	22	0	90.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  D  S  I  T  R  N  Y  W  S  W  I  R  Q  P  P  G  E  R  L  E  
                    Query_8621   4    CCCTGAGACTCTCCTGTAGTGTCTCTGGTGACTCCATCACTAGAAACTACTGGAGCTGGATTCGGCAGCCCCCAGGGGAGAGACTGGAGT  93
V  90.9% (220/242)  IGHV4-59*08  50   .....TCC...A....C.C...........G........G...TT................C...............A..G.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N  
                    Query_8621   94   GGATAGCGTATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAACC  183
V  90.9% (220/242)  IGHV4-59*08  140  ....T.G.......T...........AG...........................................G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  F  L  P  A  V  Q  E  W  L  
                    Query_8621   184  AGTTCTCCCTGAAGATGACCTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTGC  273
V  90.9% (220/242)  IGHV4-59*08  230  ..............C...G.........................G.................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD6-19*01  10   ---------------------------------------------------------------------------------........-  17

                                      ---------------------->                                  
                                      P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_8621   274  CAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCGTCAG  330
J  96.1% (49/51)    IGHJ2*01     3    ------......................................A.......C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_253553

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8622   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.2% (241/248)  IGHV4-31*03  49   ...............................G..C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8622   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.2% (241/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_8622   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.2% (241/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8622   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_107660

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAAA	CTTTCGAC	AGTAGTGGTTAT	CGGAC	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAACTTTCGACAGTAGTGGTTATCGGACACAACTGGTTGGACCCC	GKLSTVVVIGHNWLDP	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  H  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_8623   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACATTTAGTCACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.7% (225/248)  IGHV3-23*01  47   ....................G................C.....CAG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  L  S  G  S  G  L  S  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8623   91   AGTGGGTCTCCGCTCTTAGTGGTAGTGGTCTTAGCACTTACTATACAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  90.7% (225/248)  IGHV3-23*01  137  ..........A...A..............GG......A.....CG...................G.....................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  N  T  L  Y  L  Q  M  E  S  L  S  A  D  D  T  A  V  Y  F  C  G  K  L  S  T  V  V  V  I  
                    Query_8623   181  ACAACACGTTGTATCTGCAAATGGAGAGCCTGAGCGCCGACGACACGGCCGTATATTTCTGTGGGAAACTTTCGACAGTAGTGGTTATCG  270
V  90.7% (225/248)  IGHV3-23*01  227  .G......C..............A.C........A.....G................A.....C....----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD3-22*01  14   ----------------------------------------------------------------------------............--  25

                                      T------------------>                                  
                                      G  H  N  W  L  D  P  W  G  P  G  T  L  V  T  V  S  S  
                    Query_8623   271  GACACAACTGGTTGGACCCCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  324
J  96.1% (49/51)    IGHJ5*02     1    ---..........C.............A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_19158

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*03                                                                                           322     2e-90
IGHD4-4*01                                                                                            18.0    0.56 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*03	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	ACTTA	TGACTACAG	GGGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTTATGACTACAGGGGGGGTTTTGACTAC	ATYDYRGGFDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	223	17	0	92.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  H  Y  Y  W  S  W  I  R  Q  T  P  G  E  G  L  E 
                    Query_8624   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTCATTACTACTGGAGCTGGATCCGGCAGACCCCAGGGGAGGGACTGGAG  90
V  92.9% (223/240)  IGHV4-59*03  49   .......................................A..AG.........................C........A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  H  N  G  Y  T  T  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_8624   91   TGGATTGGCTATATCTATCACAACGGGTACACCACCTACAACCCCTCCCTCGAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAGAAG  180
V  92.9% (223/240)  IGHV4-59*03  139  ........G.........T...GT...AG.....A................A................A....................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  Y  D  Y  R  G  G  F  D  Y 
                    Query_8624   181  CAATTCTCCCTGAAGTTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGACTTATGACTACAGGGGGGGTTTTGACTAC  270
V  92.9% (223/240)  IGHV4-59*03  229  ...............C....C.......................................------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD4-4*01   1    -----------------------------------------------------------------.........----------------  9
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------------------------------------------------------.........  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8624   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (43/43)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_253550

Length=260
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           255     2e-70
IGHJ5*02                                                                                              89.1    4e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	N/A	IGHJ5*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCACA	N/A	N/A	N/A	AACTC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	187	11	11	0	0	100
Total	N/A	N/A	185	174	11	0	94.1


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_8625   3    CAGGTGCAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  92
V  94.1% (174/185)  IGHV1-18*04  1    .....T...................C.............................A..................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  A  T  N  Y 
                    Query_8625   93   AGTTACGGTATCAACTGGGTGCGCCAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCCCTTATAATGGTGCCACAAACTAT  182
V  94.1% (174/185)  IGHV1-18*04  91   ..C..........G.........A.................G........................G....C......AA..........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      --------------------FR3-IMGT------------------------->
                                       A  Q  T  R  S  T  P  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_8625   183  GCACAAACTCGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  236
V  94.1% (174/185)  IGHV1-18*04  181  .....-------------------------------------------------  185
                                       A                                                    
J  98.0% (48/49)    IGHJ5*02     3    -----....G............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 24602703


Query= Query_253557

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD3-16*01                                                                                           43.0    2e-08 
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCTAGTCTGGAA	TATGATTACGTTTGGGGGAGTT	CTCACCTCAC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCTAGTCTGGAATATGATTACGTTTGGGGGAGTTCTCACCTCACCTGGTTCGACCCC	AREASLEYDYVWGSSHLTWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  S  I  S  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8626   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCTCCATCAGTAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ...................C.........................T............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  T  G  S  T  K  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8626   91   TGGATTGGGTATATGTATTACACTGGGAGCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAT  180
V  96.3% (236/245)  IGHV4-59*01  139  ..............C.......G............C................A....................................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  E  A  S  L  E  Y  D  Y  V 
                    Query_8626   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGAGCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAAGCTAGTCTGGAATATGATTACGTT  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............C............C....................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (22/22)   IGHD3-16*01  5    ------------------------------------------------------------------------------............  16

                                      -IMGT--------------------------->                                  
                                       W  G  S  S  H  L  T  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8626   271  TGGGGGAGTTCTCACCTCACCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  337
D  100.0% (22/22)   IGHD3-16*01  17   ..........---------------------------------------------------------  26
J  100.0% (47/47)   IGHJ5*02     5    --------------------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_93090

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           310     1e-86
IGHD2-2*01                                                                                            14.1    8.8  
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CCCGGA	TAGTACC	GCGGCGGT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGACACCCGGATAGTACCGCGGCGGTCTACTTTTACTACGGTATGGACGTC	TRHPDSTAAVYFYYGMDV	249	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	100	14	0	87.7
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	227	29	0	88.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  S  F  S  A  S  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8627   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCAGCTTTAGTGCCTCTAGTATGCACTGGGTCCGCCAGGCTCCCGGGAAAGGGCTGG  90
V  88.7% (227/256)  IGHV3-73*01  47   .........A...........C.........G....C...C....G....GC......................T...............  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  L  G  R  I  R  R  E  S  N  S  Y  A  A  E  Y  A  A  S  V  K  G  R  F  I  I  S  R  D  
                    Query_8627   91   AGTGGCTTGGCCGTATTAGAAGGGAGTCTAACAGTTACGCGGCAGAATATGCTGCGTCGGTGAAAGGCAGGTTCATCATCTCCAGAGATG  180
V  88.7% (227/256)  IGHV3-73*01  137  .....G................CA.AG..............A...C.............................C..............  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  G  K  N  A  A  Y  L  Q  M  N  N  L  R  L  E  D  T  A  I  Y  Y  C  T  R  H  P  D  S  T  
                    Query_8627   181  ATGGAAAGAATGCGGCGTACCTGCAAATGAACAACCTGAGGCTCGAGGACACGGCCATATATTACTGTACTAGACACCCGGATAGTACCG  270
V  88.7% (227/256)  IGHV3-73*01  227  ..TC......CA.......T.............G.....AAAC.............G.G.................--------------  302
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (7/7)     IGHD2-2*01   13   ----------------------------------------------------------------------------------.......-  19

                                      -CDR3-IMGT--------------------->                                 
                                      A  A  V  Y  F  Y  Y  G  M  D  V  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_8627   271  CGGCGGTCTACTTTTACTACGGTATGGACGTCTGGGGCCAGGGGACCGCGGTCACCGTCTCCTCA  335
J  93.1% (54/58)    IGHJ6*02     5    -------.....AC..........................A......A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_107667

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           361     4e-102
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              106     3e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGGGG	TATTGTAGTAGTGCCA	ACTCTACACGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGGGGTATTGTAGTAGTGCCAACTCTACACGGCTACTACTACGGTATGGACGTC	ARLRGIVVVPTLHGYYYGMDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8628   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (240/249)  IGHV4-31*03  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  S  T  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_8628   91   CTGGAGTGGATTGGGTACATCTATTATAGTGGGAGCACCTACTACAGTACGTCCCTCAAGAGTCGACTTACCATATCGGTAGACACGTCT  180
V  96.4% (240/249)  IGHV4-31*03  139  ..........................C...................ACC.................G..........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       Q  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  R  G  I  V  V  V 
                    Query_8628   181  CAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGACTTCGGGGTATTGTAGTAGTG  270
V  96.4% (240/249)  IGHV4-31*03  229  A....................................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  93.8% (15/16)    IGHD2-2*01   5    -----------------------------------------------------------------------------............A  17

                                      CDR3-IMGT-------------------------->                                 
                                       P  T  L  H  G  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8628   271  CCAACTCTACACGGCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  339
D  93.8% (15/16)    IGHD2-2*01   18   ...------------------------------------------------------------------  20
J  100.0% (55/55)   IGHJ6*02     8    --------------.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_107666

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         369     2e-104
IGHD3-9*01                                                                                            41.1    7e-08 
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGGAACCTCGGAGACG	ATTACGATATTTTGACTGGTT	CCATTTTAG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGGAACCTCGGAGACGATTACGATATTTTGACTGGTTCCATTTTAGACTTCGGTATGGACGTA	ARDGNLGDDYDILTGSILDFGMDV	241	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	111	3	0	97.4
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_8629     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGCTACTCCATCAGCAGTGGTTACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  97.6% (242/248)  IGHV4-38-2*02  49   ..................A..........T............................................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  N  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_8629     91   GAGTGGATTGGGAATATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAG  180
V  97.6% (242/248)  IGHV4-38-2*02  139  .............G............................................................................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------------------
                                         N  H  F  S  L  T  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  N  L  G  D  D  Y 
                    Query_8629     181  AACCACTTCTCCCTGACGCTGAACTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGACGGGAACCTCGGAGACGATTAC  270
V  97.6% (242/248)  IGHV4-38-2*02  229  .....G..........A.....G.............................................----------------------  296
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (21/21)   IGHD3-9*01     3    -------------------------------------------------------------------------------------.....  7

                                        --CDR3-IMGT------------------------------>                                 
                                         D  I  L  T  G  S  I  L  D  F  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_8629     271  GATATTTTGACTGGTTCCATTTTAGACTTCGGTATGGACGTATGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  345
D  100.0% (21/21)   IGHD3-9*01     8    ................-----------------------------------------------------------  23
J  94.0% (47/50)    IGHJ6*02       13   -------------------------...A............C......................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_39060

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           321     6e-90
IGHD1-1*01                                                                                            12.2    31   
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCCTTCGAGGAAAC	TACAAC	N/A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCTTCGAGGAAACTACAACGATGCTTTTGATGTC	ARLLRGNYNDAFDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  E  V  Y  G  G  S  F  N  N  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8630   1    ACCCTGTCCCTCACCTGCGAAGTCTATGGTGGGTCCTTCAATAATTACTTCTGGAACTGGATCCGCCAGCCCCCAGGAAAGGGTCTGGAG  90
V  92.2% (224/243)  IGHV4-34*01  49   ...................CT...................G.GG.....A.....G.....................G.....G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  V  S  H  S  G  N  T  N  Y  N  L  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_8630   91   TGGATTGGGGAAGTCAGTCATAGTGGCAACACCAACTACAACCTGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAA  180
V  92.2% (224/243)  IGHV4-34*01  139  ............A...A.........A.G..............C.............................................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  L  R  G  N  Y  N  D  A 
                    Query_8630   181  CAATTCTCCCTGAACCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTTCTGTGCGAGACTCCTTCGAGGAAACTACAACGATGCT  270
V  92.2% (224/243)  IGHV4-34*01  229  ..G...........G................................G....A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-1*01   3    ------------------------------------------------------------------------------......------  8
J  98.0% (48/49)    IGHJ3*01     2    ------------------------------------------------------------------------------------......  7

                                      -------->                                  
                                       F  D  V  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8630   271  TTTGATGTCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  313
J  98.0% (48/49)    IGHJ3*01     8    ........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_19153

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           318     6e-89
IGHD2-8*01                                                                                            19.9    0.16 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGAGGGTA	ATATTATACTTCTGATGTATGC	CCCGCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCGGAGGGTAATATTATACTTCTGATGTATGCCCCGCCTGACTTC	ARAEGNIILLMYAPPDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  R  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8631   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCGTTCAGTAGATACACCATGAACTGGGTCCGCCAGGCTCCTGGGAAGGGCCTGG  90
V  90.8% (226/249)  IGHV3-21*01  47   ...................................A.C........C..T.G........................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  D  S  N  T  I  Y  Y  T  D  S  V  K  G  R  F  S  I  S  R  D  N  A  
                    Query_8631   91   AGTGGGTCTCATCTATTAGTGGCGATAGTAATACCATATACTACACAGACTCGGTGAAGGGCCGATTCAGCATCTCCAGAGACAACGCCA  180
V  90.8% (226/249)  IGHV3-21*01  137  .............C......A.TAG.....G.TA..........G.......A................C....................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  F  L  Q  M  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  E  G  N  I  I  L  
                    Query_8631   181  AGAACTCACTGTTTCTTCAAATGCACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGCGAGCGGAGGGTAATATTATACTTC  270
V  90.8% (226/249)  IGHV3-21*01  227  ............A...G......A............................G............A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  81.8% (18/22)    IGHD2-8*01   4    ------------------------------------------------------------------------------.....G....AA  15

                                      GT-------------------->                                  
                                      L  M  Y  A  P  P  D  F  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_8631   271  TGATGTATGCCCCGCCTGACTTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  327
D  81.8% (18/22)    IGHD2-8*01   16   ..G.......-----------------------------------------------  25
J  95.1% (39/41)    IGHJ4*02     8    ----------------.....A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_253559

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         310     1e-86
IGHD3-3*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TCTTAATCTT	TTACGATTTTTCGACTGGCTAT	CGTCGAAA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGGATCTTAATCTTTTACGATTTTTCGACTGGCTATCGTCGAAAGGTATGGACGTC	VRDLNLLRFFDWLSSKGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8632     1    GGTCCCTGAGACTTTCCTGTGTAGCCTCTGGATTCACGTTTAGTAACTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  89.6% (224/250)  IGHV3-30-3*01  47   .............C.......C...............C..C....G......T.....................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  S  V  I  S  Y  D  G  T  T  K  Y  Y  A  S  S  V  K  G  R  F  T  N  S  R  D  N  S  
                    Query_8632     91   AGTGGGTGTCAGTAATTTCATATGATGGAACCACTAAGTACTACGCAAGCTCCGTGAAGGGCCGATTCACCAACTCCAGAGACAATTCCA  180
V  89.6% (224/250)  IGHV3-30-3*01  137  ........G....T..A.............G..A...A.........GA.......................T.................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------------CD
                                        K  N  T  L  Y  L  Q  V  S  S  L  T  P  E  D  T  A  V  Y  F  C  V  R  D  L  N  L  L  R  F  
                    Query_8632     181  AGAATACCCTGTATCTGCAAGTGAGCAGCCTGACACCCGAGGACACGGCTGTGTACTTCTGTGTGAGGGATCTTAATCTTTTACGATTTT  270
V  89.6% (224/250)  IGHV3-30-3*01  227  ....C..G............A...A........G.G.T.................T.A.....C...A..--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.4% (19/22)    IGHD3-3*01     4    --------------------------------------------------------------------------------..........  13

                                        R3-IMGT------------------------>                                 
                                        F  D  W  L  S  S  K  G  M  D  V  W  G  Q  G  T  A  V  I  V  S  S 
                    Query_8632     271  TCGACTGGCTATCGTCGAAAGGTATGGACGTCTGGGGCCAAGGGACCGCAGTCATCGTCTCCTCA  335
D  86.4% (19/22)    IGHD3-3*01     14   .G..G...T...-----------------------------------------------------  25
J  93.3% (42/45)    IGHJ6*02       18   --------------------...........................A.G....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_253558

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGTGAGGAAGGA	TACTATGATACTAGTGGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGTGAGGAAGGATACTATGATACTAGTGGTTATTCGGACTAT	AKDGEEGYYDTSGYSDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  T  P  G  K  G  L  
                    Query_8633   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGATATGCCATGTCCTGGGTCCGCCAGACTCCAGGGAAGGGCCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ...........................................C..C.........AG.............G.............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  V  S  G  S  G  G  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8633   91   AGTGGGTCTCAACAGTGAGTGGTAGTGGAGGTGGCACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  ...........G.TA.T...........T...A..........C..............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  I  Y  Y  C  A  K  D  G  E  E  G  Y  Y  
                    Query_8633   181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAACCGAGGACACGGCCATATATTACTGTGCGAAAGATGGTGAGGAAGGATACTATG  270
V  93.6% (234/250)  IGHV3-23*01  227  ..............C....................G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.5% (21/22)    IGHD3-22*01  5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                      D  T  S  G  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8633   271  ATACTAGTGGTTATTCGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.5% (21/22)    IGHD3-22*01  12   ...G...........------------------------------------------  26
J  97.5% (39/40)    IGHJ4*02     9    -----------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_39064

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           324     7e-91
IGHD1-26*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GAG	GTGGGAG	T	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGAGGTGGGAGTTACTACTACGCCATGGACGTC	ARGGGSYYYAMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	20	4	0	83.3
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	123	24	21	3	0	87.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	231	219	12	0	94.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  R  S  H  W  M  H  W  V  R  Q  A  P  G  R  G  L  V  W  V  S  R  I  
                    Query_8634   14   GTGCAGCCTCTGGATTCACCTTCAGGAGTCATTGGATGCACTGGGTCCGCCAAGCTCCAGGGAGGGGGCTGGTGTGGGTCTCACGTATTC  103
V  94.8% (219/231)  IGHV3-74*01  65   .........................T..CT.C...............................A.........................A  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      H  T  D  G  S  S  T  S  Y  V  D  S  V  K  G  R  F  T  V  S  R  D  N  G  K  N  T  L  Y  L  
                    Query_8634   104  ACACTGATGGGAGTAGCACAAGCTATGTGGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGGCAAGAACACGCTGTATCTGC  193
V  94.8% (219/231)  IGHV3-74*01  155  .T.G.....................C.C.........................A...............C....................  244
                                      N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------CDR3-IMGT-------------->       
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  G  S  Y  Y  Y  A  M  D  V  W  G  
                    Query_8634   194  AAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGGAGGTGGGAGTTACTACTACGCCATGGACGTCTGGGGCC  283
V  94.8% (219/231)  IGHV3-74*01  245  ...................................................---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (7/7)     IGHD1-26*01  7    ------------------------------------------------------.......-----------------------------  13
J  96.3% (52/54)    IGHJ6*02     9    --------------------------------------------------------------..........GT................  36

                                                                
                                      Q  G  T  T  V  T  V  S  S 
                    Query_8634   284  AAGGGACCACGGTCACCGTCTCCTCA  309
J  96.3% (52/54)    IGHJ6*02     37   ..........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_93098

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_8635   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.0% (227/244)  IGHV4-59*01  50   .....TCC...A..........................A...G...........G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  R  S  R  V  T  I  S  V  D  K  S  K  N  
                    Query_8635   94   GGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACC  183
V  93.0% (227/244)  IGHV4-59*01  140  .......G..................A...............C........A..........................C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D  
                    Query_8635   184  AGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGACG  273
V  93.0% (227/244)  IGHV4-59*01  230  ........C....G.....C..........................G...........G.....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  94.8% (55/58)    IGHJ6*02     5    -------------------------------------------------------------------.....AC................  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_8635   274  TCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  308
J  94.8% (55/58)    IGHJ6*02     28   ........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_19154

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           310     1e-86
IGHD2-21*02                                                                                           33.4    1e-05
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTCCCCAAAA	ATTGTGGTGGTGACTGC	CCCTGC	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTCCCCAAAAATTGTGGTGGTGACTGCCCCTGCGACGAC	AKDLPKNCGGDCPCDD	234	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	233	114	98	7	9	86
CDR3-IMGT (germline)	234	241	8	8	0	0	100
Total	N/A	N/A	250	226	15	9	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8636   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAAGGGCTGG  90
V  90.4% (226/250)  IGHV3-30*18  47   ..................................................................................G.......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  A  Y  D  G  G  K  K  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  K  S  
                    Query_8636   91   AGTGGGTGGCATCTATTGCATATGATGGAGGAAAAAAATACTATGCGGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAAATCC-  179
V  90.4% (226/250)  IGHV3-30*18  137  ...........GT...AT...........A.T..T...........A..........A...........................T...A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                               L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  F  C  A  K  D  L  P  K  N  C  G  
                    Query_8636   180  --------CTGTATCTGCAGATGAACAGCCTGAGACCTGAAGACACGGCTGTGTATTTCTGTGCGAAAGATCTCCCCAAAAATTGTGGTG  261
V  90.4% (226/250)  IGHV3-30*18  227  AGAACACG...........A...............G....G................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (17/17)   IGHD2-21*02  6    ---------------------------------------------------------------------------------.........  14

                                      T------------------>                                  
                                      G  D  C  P  C  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8636   262  GTGACTGCCCCTGCGACGACTGGGGTCAGGGAACCCTGGTCACCGTCTCCTCAG  315
D  100.0% (17/17)   IGHD2-21*02  15   ........----------------------------------------------  22
J  95.0% (38/40)    IGHJ4*02     9    --------------...T.......C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_19155

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           299     3e-83
IGHD1-26*01                                                                                           12.2    35   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTCTGGATCTCT	TGGGAG	GCGACAC	TGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCTGGATCTCTTGGGAGGCGACACTGACGAC	ATLDLLGGDTDD	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	43	8	0	84.3
CDR2-IMGT	146	169	24	16	8	0	66.7
FR3-IMGT	170	283	114	94	20	0	82.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	239	48	0	83.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  A  G  S  T  V  K  V  S  C  K  T  S  R  A  T  F  S  S  N
                    Query_8637   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGGCTGGGTCCACGGTGAAGGTCTCCTGCAAGACTTCCAGGGCCACCTTCAGCAGCAA  90
V  83.3% (239/287)  IGHV1-69*06  6    ..................G...............C........T....................G....TG.A.G.............T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        T  F  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  A  I  I  P  T  L  R  T  T  N  Y  A  Q
                    Query_8637   91   CACCTTCACTTGGGTGCGCCAGGCCCCGGGACAAGGGCTTGAGTGGATGGGGGCCATCATCCCCACCCTGCGCACGACAAACTACGCACA  180
V  83.3% (239/287)  IGHV1-69*06  96   TG.TA...GC........A........T.......................A.GG........T.T.T.TG.T..AG.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  R  S  S  S  T  S  Y  M  G  L  S  G  L  T  P  E  D  T  A
                    Query_8637   181  GAGGTTCCAAGGCAGAGTCACCATAACCGCGGACAGGTCTTCGAGTACAAGTTATATGGGACTGAGCGGTCTGACTCCTGAGGACACGGC  270
V  83.3% (239/287)  IGHV1-69*06  186  ..A......G...........G..T..........AA..CA....C...GCC..C....AG......A.C....GAT.............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  T  L  D  L  L  G  G  D  T  D  D  W  G  P  G  T  L  V  T  V  S  S  
                    Query_8637   271  CGTGTATTACTGTGCGACTCTGGATCTCTTGGGAGGCGACACTGACGACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  353
V  83.3% (239/287)  IGHV1-69*06  276  .................------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                    
D  100.0% (6/6)     IGHD1-26*01  8    -----------------------------......------------------------------------------------  13
J  95.1% (39/41)    IGHJ4*02     8    ------------------------------------------....T.........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_18289

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           360     1e-101
IGHD1-1*01                                                                                            10.3    121   
IGHJ6*02                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	T	TACAA	TAACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACAATAACGACTACTACTATTATGGTATGGACGTC	ARDYNNDYYYYGMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8638   1    GGTCCCTGAGACTCTCCTGTGCAGCATCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  96.0% (240/250)  IGHV3-48*03  47   .........................C...........................................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  D  S  G  S  T  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8638   91   AGTGGATTTCATACATTAGTGATAGCGGTAGTACCAAATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-48*03  137  .....G..............AG...T..........T.....................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  D  Y  N  N  D  Y  Y  
                    Query_8638   181  AGAAGTCACTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTTCTGTGCGAGAGATTACAATAACGACTACTACT  270
V  96.0% (240/250)  IGHV3-48*03  227  ....C...........G........................................A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-1*01   3    -----------------------------------------------------------------------.....--------------  7
J  94.9% (56/59)    IGHJ6*02     4    ---------------------------------------------------------------------------------.........  12

                                      ---------------->                                 
                                      Y  Y  G  M  D  V  W  G  H  G  T  T  V  T  V  S  S 
                    Query_8638   271  ATTATGGTATGGACGTCTGGGGCCACGGGACCACGGTCACCGTCTCCTCA  320
J  94.9% (56/59)    IGHJ6*02     13   .C..C....................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_106133

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           389     2e-110
IGHD3-10*01                                                                                           12.2    36    
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TCGGGG	TCTTTGGTCCGGCGAACAGGGA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGGGTCTTTGGTCCGGCGAACAGGGATACTTTGACTTC	ARDRGLWSGEQGYFDF	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	270	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  L  K  V  S  C  K  A  S  G  G  A  F  S  T  Y
                    Query_8639   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGCTGAAGGTCTCCTGCAAGGCTTCTGGAGGCGCCTTCAGCACCTA  90
V  92.8% (270/291)  IGHV1-69*01  6    ..................G...........................G.............................A.........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  S  W  V  R  Q  A  P  G  H  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  N  Y  A  N
                    Query_8639   91   TGCTGTCAGCTGGGTGCGACAGGCCCCTGGACACGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACCACAAACTACGCAAA  180
V  92.8% (270/291)  IGHV1-69*01  96   ....A............................A.........................................AG...........C.  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        D  F  R  G  R  L  T  I  I  A  D  G  S  T  S  T  A  C  M  E  L  T  S  L  R  S  E  D  T  A
                    Query_8639   181  TGACTTCCGGGGCAGACTCACGATTATCGCGGACGGATCCACGAGCACAGCCTGCATGGAGCTGACCAGCCTCAGATCTGAGGACACGGC  270
V  92.8% (270/291)  IGHV1-69*01  186  GA.G....A.......G.........C........A.................A...........G......G.................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  D  R  G  L  W  S  G  E  Q  G  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S
                    Query_8639   271  CGTCTATTATTGTGCGAGAGATCGGGGTCTTTGGTCCGGCGAACAGGGATACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTC  360
V  92.8% (270/291)  IGHV1-69*01  276  ...G.....C...........---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-10*01  14   ---------------------......---------------------------------------------------------------  19
J  97.8% (45/46)    IGHJ4*02     3    -------------------------------------------------..........A..............................  43

                                           
                                        S  
                    Query_8639   361  CTCAG  365
J  97.8% (45/46)    IGHJ4*02     44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_167908

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            377     1e-106
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ3*01                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCA	GTATTATCATGATAGTCGTGGTTA	CCCGATACATGGA	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCAGTATTATCATGATAGTCGTGGTTACCCGATACATGGAGCTTTTGATGTC	ARAQYYHDSRGYPIHGAFDV	292	351	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	70	5	0	93.3
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	46	5	0	90.2
CDR2-IMGT	154	177	24	18	6	0	75
FR3-IMGT	178	291	114	105	9	0	92.1
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	295	268	27	0	90.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  R  R  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_8640   4    CAGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAGGAGGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACT  93
V  90.8% (268/295)  IGHV1-3*01   1    ...........T..G........G..........A..A....................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  A  I  H  W  V  R  Q  A  L  G  Q  R  L  E  W  M  G  G  I  S  A  A  N  G  S  P  Q  Y 
                    Query_8640   94   AATTATGCTATACATTGGGTGCGTCAGGCCCTCGGACAAAGACTTGAGTGGATGGGAGGGATCAGCGCTGCCAATGGAAGTCCACAATAT  183
V  90.8% (268/295)  IGHV1-3*01   91   .GC........G...........C.......C.........G...............T......A.....G......T.ACA..A.....  180
                                       S  Y  A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  Q  R  F  Q  G  R  V  S  I  T  R  D  T  S  A  N  T  D  Y  M  E  L  S  S  L  S  S  E  D 
                    Query_8640   184  TCACAGAGGTTCCAGGGCAGAGTCTCCATTACCAGGGACACATCCGCGAATACAGACTACATGGAACTGAGCAGCCTGAGCTCTGAAGAC  273
V  90.8% (268/295)  IGHV1-3*01   181  .......A................A........................GC....C.........G..............A.........  270
                                       S  Q  K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  V  F  Y  C  A  R  A  Q  Y  Y  H  D  S  R  G  Y  P  I  H  G  A  F  D  V  W  G  Q  G 
                    Query_8640   274  ACGGCTGTGTTTTACTGTGCGAGAGCCCAGTATTATCATGATAGTCGTGGTTACCCGATACATGGAGCTTTTGATGTCTGGGGCCAAGGG  363
V  90.8% (268/295)  IGHV1-3*01   271  ..........A..............-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  87.5% (21/24)    IGHD3-22*01  1    -----------------------------......CT........A.......-------------------------------------  24
J  97.8% (45/46)    IGHJ3*01     5    ------------------------------------------------------------------........................  28

                                                            
                                       T  V  V  T  V  S  S  
                    Query_8640   364  ACAGTGGTCACCGTCTCTTCAG  385
J  97.8% (45/46)    IGHJ3*01     29   ...A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_106131

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           388     5e-110
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	291	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	68	6	0	91.9
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	297	7	6	1	0	85.7
Total	N/A	N/A	294	271	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  
                    Query_8641   4    AGGTTCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCA  93
V  92.2% (271/294)  IGHV5-51*01  2    ....G...................C........A.....................G.........A......C.........C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  H  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  
                    Query_8641   94   ATCACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATA  183
V  92.2% (271/294)  IGHV5-51*01  92   GCT....................................................G.......A.....G.......G....C.....C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  
                    Query_8641   184  GCCCGTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACA  273
V  92.2% (271/294)  IGHV5-51*01  182  ...................G........C...................................G.......G.................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------CDR3-IMGT----------->                                  
                                      T  A  L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_8641   274  CCGCCTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  357
V  92.2% (271/294)  IGHV5-51*01  272  .....A.......C.....G....------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   --------------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    ---------------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_106136

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           336     1e-94
IGHD4-17*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              46.8    3e-09


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGTTTCT	TACGGTGAC	CCCACAAGTTACTCTCGGTG	TTGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGGGTTTCTTACGGTGACCCCACAAGTTACTCTCGGTGTTGTCTTC	VKGFLTVTPQVTLGVVF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  D  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8642   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCGATAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-23*01  47   ....................................C.TT.....G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  I  S  G  S  Y  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_8642   91   AGTGGGTCTCATCTATTAGTATTAGTGGTTCTTACACATACTACGTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAGTTCCA  180
V  93.2% (232/249)  IGHV3-23*01  137  ...........G........GG.......GG.AG...........C......................................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  I  Y  Y  G  V  K  G  F  L  T  V  T  P  
                    Query_8642   181  AGAACACGCTGTATCTGCAAATGAGCAGCCTGAGAGCCGAGGACACGGCCATATATTACGGTGTGAAAGGGTTTCTTACGGTGACCCCAC  270
V  93.2% (232/249)  IGHV3-23*01  227  ........................A.........................G........T...C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD4-17*01  5    ----------------------------------------------------------------------------.........-----  13

                                      GT-------------------->                                  
                                      Q  V  T  L  G  V  V  F  W  G  L  G  S  L  A  T  V  S  S  
                    Query_8642   271  AAGTTACTCTCGGTGTTGTCTTCTGGGGCCTGGGATCCCTGGCCACTGTCTCCTCAG  327
J  85.7% (36/42)    IGHJ4*02     7    ---------------...A..A........A....A......T...C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_237583

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           272     2e-75
IGHD2-8*02                                                                                            12.2    32   
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTTACTTCTATGGCGAACCCGGGA	TACTGG	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTTACTTCTATGGCGAACCCGGGATACTGGGGTATGGACGTC	AKDVTSMANPGYWGMDV	239	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	45	6	0	88.2
CDR2-IMGT	101	124	24	15	9	0	62.5
FR3-IMGT	125	238	114	103	11	0	90.4
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	232	203	29	0	87.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  R  G  L  Q  W  V  A  M  I  
                    Query_8643   15   GTGCAGCCTCTGGATTCACCTTCAGTAGTTACGCCATGCACTGGGTCCGCCAGGCTCCAGGCAGGGGCCTGCAGTGGGTGGCGATGATAT  104
V  87.5% (203/232)  IGHV3-30*18  65   ............................C..T.G.............................A...G...G..........AG.T....  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  Y  N  G  G  S  R  F  Y  A  D  F  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  M  D  L  
                    Query_8643   105  CGTACAATGGAGGCAGTCGCTTTTATGCAGACTTCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGATGGATCTGC  194
V  87.5% (203/232)  IGHV3-30*18  155  .A..TG.....A.T.A.AAA.AC..........C..............................................C..T......  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------------CDR3-IMGT----------------
                                      Q  M  H  S  L  R  G  D  D  T  A  I  Y  Y  C  A  K  D  V  T  S  M  A  N  P  G  Y  W  G  M  
                    Query_8643   195  AAATGCACAGCCTGAGAGGTGACGACACGGCCATATATTACTGTGCGAAAGATGTTACTTCTATGGCGAACCCGGGATACTGGGGTATGG  284
V  87.5% (203/232)  IGHV3-30*18  245  .....A............C...G........TG.G.................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (6/6)     IGHD2-8*02   10   -----------------------------------------------------------------------------......-------  15
J  97.7% (43/44)    IGHJ6*02     18   -----------------------------------------------------------------------------------.......  24

                                      ---->                                
                                      D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_8643   285  ACGTCTGGGGCCAGGGGACCACGGTCACCGTCTCCTC  321
J  97.7% (43/44)    IGHJ6*02     25   .............A.......................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_106135

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            308     4e-86
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCATCTTTCAA	CAGCAGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCATCTTTCAACAGCAGGTACTCGGGGTTTTGACTAC	ASHLSTAGTRGFDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	221	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  V  G  S  I  T  S  A  N  W  W  S  W  V  R  Q  P  P  G  R  G  L 
                    Query_8644   1    ACCCTGTCCCTCACCTGCGATGTCTCTGTTGGCTCCATCACCAGTGCTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAGGGGACTG  90
V  90.2% (221/245)  IGHV4-4*01   49   ...................C........G...........G....AG...................................A...G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  K  S  N  Y  S  P  S  L  R  G  R  V  T  I  S  V  D  K  S  M 
                    Query_8644   91   GAGTGGATTGGGGAAATCTATCATGGTGGGAAGTCCAACTACAGTCCGTCCCTCAGGGGTCGCGTCACCATTTCAGTGGACAAGTCCATG  180
V  90.2% (221/245)  IGHV4-4*01   139  ........................A......GCA.........AC..........A.A....A........A.....A..........A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  S  H  L  S  T  A  G  T  R 
                    Query_8644   181  AACCAGTTCTCCCTGAAGCTGAATTCTGTGACCGCCGCGGACACGGCCGTATACTTCTGTGCGAGCCATCTTTCAACAGCAGGTACTCGG  270
V  90.2% (221/245)  IGHV4-4*01   229  ......................GC..........................G..T.G.........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  90.0% (9/10)     IGHD6-13*01  12   ----------------------------------------------------------------------------....T.....----  21

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_8644   271  GGTTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02     6    ---.....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_167902

Length=303
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            184     1e-48
IGHD2-2*01                                                                                            12.2    28   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	204	245	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR2-IMGT	51	68	18	17	1	0	94.4
CDR2-IMGT	69	89	21	15	6	0	71.4
FR3-IMGT	90	203	114	101	13	0	88.6
CDR3-IMGT (germline)	204	209	6	5	1	0	83.3
Total	N/A	N/A	159	138	21	0	86.8


Alignments

                                     <----FR2-IMGT----><-----CDR2-IMGT-----><--------------------------------------------------
                                      L  E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P 
                    Query_8645  51   CTGGAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCC  140
V  86.8% (138/159)  IGHV4-4*01  136  .................A...T.....A.T..GAG............C.........A.............................T..  225
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 

                                     --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                      R  N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T 
                    Query_8645  141  AGAAATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACT  230
V  86.8% (138/159)  IGHV4-4*01  226  .AG..C.............AG...A.C...G.....G.....................G.......A..---------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                      
D  83.3% (10/12)    IGHD2-2*01  13   -------------------------------------------------------------------------.....C..G...-----  24

                                     -------------->                                  
                                      R  G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_8645  231  CGGGGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  279
J  93.0% (40/43)    IGHJ4*02    6    ------.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 29143116


Query= Query_106138

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           411     5e-117
IGHD1-26*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTGTTTTC	TGGGACCTACTAC	CTTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTAC	ARVFSGTYYLLDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	276	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  T  A  F  G  Y  S  F  T  S  Y
                    Query_8646   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTACGGCTTTTGGATACAGCTTTACCAGTTA  90
V  95.5% (276/289)  IGHV5-51*03  6    ..............................................................A..G..C..................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  R  D  G  E  T  R  Y  S  P
                    Query_8646   91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTCGTGACGGTGAAACCAGATACAGCCC  180
V  95.5% (276/289)  IGHV5-51*03  96   C...............................A...............................G.....TC...T..............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_8646   181  GTCCTTCCAAGGCCAGGTCAGCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  95.5% (276/289)  IGHV5-51*03  186  ....................C....................................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                
                                        M  Y  Y  C  A  R  V  F  S  G  T  Y  Y  L  L  D  Y  W   A  R  E  P  W  S  P  S  P  
                    Query_8646   271  CATGTATTATTGTGCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTACTGGG-CCAGGGAACCCTGGTCACCGTCTCCTC  353
V  95.5% (276/289)  IGHV5-51*03  276  .........C.........-----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                  
D  92.3% (12/13)    IGHD1-26*01  8    ---------------------------.....G.......--------------------------------------------  20
J  97.5% (39/40)    IGHJ4*02     7    --------------------------------------------............G...........................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_18282

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           333     1e-93
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	N/A	N/A	TCGTGCAGAAAGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGTCGTGCAGAAAGGCTTTGACTTC	ATVVQKGFDF	249	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	255	7	6	1	0	85.7
Total	N/A	N/A	255	234	21	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_8647   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAAAGCCTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.8% (234/255)  IGHV3-15*01  47   .......T......................................C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  G  I  D  G  G  T  A  D  Y  A  A  L  V  K  G  R  C  T  I  S  R  D  
                    Query_8647   91   AATGGGTTGGCCGTATTAAAAGCGGAATTGATGGTGGGACCGCAGACTACGCTGCACTCGTGAAAGGCAGATGCACCATCTCAAGAGATG  180
V  91.8% (234/255)  IGHV3-15*01  137  .G.....................AA..C............AA...............C..............T.................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--
                                      D  L  K  N  I  L  Y  L  Q  L  N  S  V  R  S  E  D  T  G  V  Y  Y  C  A  T  V  V  Q  K  G  
                    Query_8647   181  ATTTAAAAAACATACTGTATCTGCAACTGAACAGCGTGAGAAGCGAGGACACAGGCGTCTATTACTGTGCCACAGTCGTGCAGAAAGGCT  270
V  91.8% (234/255)  IGHV3-15*01  227  ...C........CG............A........C...A..C...........C...G.........A......---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8647   271  TTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.7% (43/44)    IGHJ4*02     7    ......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_167907

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8648   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.2% (243/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  A  D  T  T 
                    Query_8648   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGCAGACACGACT  180
V  97.2% (243/250)  IGHV4-31*03  139  ...............T......A...........................................G............T.......T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  V  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_8648   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGTCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  97.2% (243/250)  IGHV4-31*03  229  .................................................C....................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8648   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_167904

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGGG	AGCAATGGCTGG	GGAAGGTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTATGGACGCC	ARGHRGSNGWGRYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	21	3	6	70
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  P  L  S  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_8649   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGCCCCTCAGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T......T..T......------....C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  L  D  T  S 
                    Query_8649   91   CTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAATCCGTCCCTCCAGAGTCGAGTCACCATATCACTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G.............T..A....AG.....G............C.........A....................G...........  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  G  S  N  G 
                    Query_8649   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGGGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  R  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  I  S  S 
                    Query_8649   271  TGGGGAAGGTACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCATCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.............T................A.....A..G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_18286

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           422     2e-120
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	CCGCCTTCCCTAGCGACACCGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGCCTTCCCTAGCGACACCGGGTACTTTGACTAC	ARAAFPSDTGYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  D  T  F  T  R  Y
                    Query_8650   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGAGACACCTTCACCAGGTA  90
V  96.6% (280/290)  IGHV1-46*01  6    .........................................................................T.............C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  S  G  A  T  K  Y  A  Q
                    Query_8650   91   CTTTATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTAGTGGAGCCACAAAATACGCACA  180
V  96.6% (280/290)  IGHV1-46*01  96   ..A................................................................G....TAG.....GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  I  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_8650   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAATCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  96.6% (280/290)  IGHV1-46*01  186  .................................................G........................................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  A  A  F  P  S  D  T  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8650   271  CGTGTATTACTGTGCGAGAGCCGCCTTCCCTAGCGACACCGGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  96.6% (280/290)  IGHV1-46*01  276  ....................---------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                       
J  100.0% (46/46)   IGHJ4*02     3    -------------------------------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_285253

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q 
                    Query_8651   1    ACCCTGTCCCTCACCTGCACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAA  90
V  91.0% (223/245)  IGHV4-59*01  49   ....................T..........................C........C............C.................G.G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_8651   91   TGGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAAC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A....G.....C...T....T....G......C..............C...........C.C.........A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E 
                    Query_8651   181  CAGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAG  270
V  91.0% (223/245)  IGHV4-59*01  229  ...T.........AG..G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  1    -----------------------------------------------------------------------------............-  12

                                      -------------->                                  
                                       D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_8651   271  GATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  319
J  92.5% (37/40)    IGHJ4*02     9    ---------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_1951

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*02                                                                                           35.3    4e-06
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCTAGTTTGGAATG	TGATTGCGTTTGGGGGAGTTCTCG	CCTCAC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCTAGTTTGGAATGTGATTGCGTTTGGGGGAGTTCTCGCCTCACCTGGTTCCCCCCC	AREASLECDCVWGSSRLTWFPP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  S  I  S  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8652   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCTCCATCAGTAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...................C.........................T............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  T  G  S  T  K  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8652   91   TGGATTGGGTATATGTATTACACTGGGAGCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAT  180
V  95.5% (234/245)  IGHV4-59*01  139  ..............C.......G............C................A....................................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  S  S  V  S  A  A  G  T  A  V  Y  Y  C  A  R  E  A  S  L  E  C  D  C  V 
                    Query_8652   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGAGTGCTGCGGGCACGGCCGTGTATTACTGTGCGAGAGAAGCTAGTTTGGAATGTGATTGCGTT  270
V  95.5% (234/245)  IGHV4-59*01  229  ...............C............CC.......A...........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (22/24)    IGHD3-16*02  7    --------------------------------------------------------------------------------.....A....  16

                                      -IMGT--------------------------->                                 
                                       W  G  S  S  R  L  T  W  F  P  P  W  G  Q  G  P  L  V  P  V  S  S 
                    Query_8652   271  TGGGGGAGTTCTCGCCTCACCTGGTTCCCCCCCTGGGGCCAGGGACCCCTGGTCCCCGTCTCCTCA  336
D  91.7% (22/24)    IGHD3-16*02  17   ..........A...----------------------------------------------------  30
J  91.3% (42/46)    IGHJ5*02     5    --------------------.......GA................A........A...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_285251

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGATCGGGGAAATATTAT	GCTCAAA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGATCGGGGAAATATTATGCTCAAAAC	ARGHSYGSGKYYAQN	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8653   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ...............................G.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8653   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGGGTTACCATATCAGTTGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ........................................A........................A..............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  F  L  R  L  S  P  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  S  Y  G  S  G 
                    Query_8653   181  AAGAACCAGTTCTTCTTGAGGCTGAGCCCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTCCTATGGATCGGGG  270
V  96.4% (241/250)  IGHV4-31*03  229  .............C.C...A.......T..........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD3-10*01  7    -----------------------------------------------------------------------------......T......  19

                                      ----------------->                                  
                                       K  Y  Y  A  Q  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8653   271  AAATATTATGCTCAAAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  86.4% (19/22)    IGHD3-10*01  20   .GT......-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_285250

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           355     3e-100
IGHD3-16*02                                                                                           12.2    31    
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTATCG	ACATTGGTTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTATTTGACTAT	ARHYRHWLFDY	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	239	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  L  T  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_8654   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCCTCACCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.2% (239/251)  IGHV4-39*01  49   ...............................G....A...G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8654   91   CTGGAGTGGATTGGGAGTTTGTATTATAGTGGCAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  95.2% (239/251)  IGHV4-39*01  139  ..................A.C...........G...............................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  H  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  H  W  L  F 
                    Query_8654   181  AAGAACCACTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATTATCGACATTGGTTATTT  270
V  95.2% (239/251)  IGHV4-39*01  229  ........G..C........G....G...T.........................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-16*02  25   -----------------------------------------------------------------------......-------------  30
J  97.7% (42/43)    IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8654   271  GACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  97.7% (42/43)    IGHJ4*02     9    .....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_285257

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           399     3e-113
IGHD3-3*01                                                                                            23.8    0.012 
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	ACTCTCC	TTTTGGAGTGGT	GATCCCA	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACTCTCCTTTTGGAGTGGTGATCCCAAACTGGTTCGACCCC	ANSPFGVVIPNWFDP	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	271	16	0	94.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  P  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  Y  G  G  T  F  S  S  Y
                    Query_8655   1    GCAGCTGGTGCAGCCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTATGGAGGCACCTTCAGCAGCTA  90
V  94.4% (271/287)  IGHV1-69*01  6    .............T....G.................................................C.....................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  Y  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  R  A  H  Y  A  Q
                    Query_8655   91   TGCCTACAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATATTTGGTAGAGCACACTACGCACA  180
V  94.4% (271/287)  IGHV1-69*01  96   ...TAT..G.........................................................C.......C....A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  E  S  T  G  T  A  Y  M  D  L  S  G  L  I  S  E  D  T  A
                    Query_8655   181  GAGGTTCCAGGGCAGAGTCACGATAACCGCGGACGAATCCACGGGCACAGCCTACATGGACCTGAGCGGCCTGATATCTGAGGACACGGC  270
V  94.4% (271/287)  IGHV1-69*01  186  ..A.....................T..................A................G......A......G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  N  S  P  F  G  V  V  I  P  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8655   271  CGTGTATTACTGTGCGAACTCTCCTTTTGGAGTGGTGATCCCAAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  94.4% (271/287)  IGHV1-69*01  276  .................-------------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                           
D  100.0% (12/12)   IGHD3-3*01   11   ------------------------............------------------------------------------------------  22
J  100.0% (47/47)   IGHJ5*02     3    -------------------------------------------...............................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_1955

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*02                                                                                            366     2e-103
IGHD1-1*01                                                                                            12.2    36    
IGHJ6*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*02	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCATCGG	TGGAAC	CGACCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGGTCATCGGTGGAACCGACCTTACTATTACGCTTTGGACTTC	VRGHRWNRPYYYALDF	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	5	2	0	71.4
Total	N/A	N/A	290	262	28	0	90.3


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  A  Y
                    Query_8656  1    GCAGCTGGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACTTTTACTGCCTA  90
V  90.3% (262/290)  IGHV1-2*02  6    ..................G.....G.....................................................C..C..C.G...  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       Y  I  H  W  V  R  Q  T  P  G  Q  G  L  E  W  M  G  S  L  N  P  N  N  G  A  T  N  Y  A  Q
                    Query_8656  91   CTACATACACTGGGTGCGACAGACCCCTGGACAAGGGCTTGAGTGGATGGGAAGCCTCAACCCTAACAATGGTGCCACAAACTATGCACA  180
V  90.3% (262/290)  IGHV1-2*02  96   ...T..G...............G.............................T.GA............G.....G...............  185
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  Q  G  R  I  T  L  T  S  D  T  S  I  S  K  A  Y  M  E  L  S  R  L  T  S  D  D  T  A
                    Query_8656  181  GAAATTTCAGGGCAGGATCACGTTGACCAGTGACACGTCCATCAGTAAAGCCTACATGGAGCTGAGTAGGCTGACATCTGACGACACGGC  270
V  90.3% (262/290)  IGHV1-2*02  186  ...G............G....CA.......G..............C.C..................C.......G...............  275
                                       K  F  Q  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                     ------------><-------------------CDR3-IMGT------------------>                             
                                       V  F  F  C  V  R  G  H  R  W  N  R  P  Y  Y  Y  A  L  D  F  W  G  R  G  T  T  V  T  V  S
                    Query_8656  271  CGTATTTTTCTGTGTGCGAGGTCATCGGTGGAACCGACCTTACTATTACGCTTTGGACTTCTGGGGCCGAGGGACCACGGTCACCGTCTC  360
V  90.3% (262/290)  IGHV1-2*02  276  ...G.A..A.....C.A...----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD1-1*01  9    ----------------------------......--------------------------------------------------------  14
J  90.7% (49/54)    IGHJ6*02    9    ----------------------------------------.....C....G.A.....G.........A.....................  58

                                         
                                       S 
                    Query_8656  361  CTCA  364
J  90.7% (49/54)    IGHJ6*02    59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_285255

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           335     4e-94
IGHD3-10*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAAGCCAG	GGTTCGGGGA	ATTTTCCCA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGAAGCCAGGGTTCGGGGAATTTTCCCATACTACTGCGGTATGGACGTC	ARDEARVRGIFPYYCGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8657   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-48*03  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  I  S  Y  I  S  G  S  G  S  D  M  R  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  G  
                    Query_8657   91   AGTATATTTCATACATTAGCGGGAGTGGCAGTGACATGAGGTACGCAGACTCTGTGAAGGGCCGATTCATCATCTCCAGAGACAACGGCA  180
V  92.8% (232/250)  IGHV3-48*03  137  ...GGG.............TA.T.....T...AC...ATAC............................C.................C..  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  W  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  E  A  R  V  R  G  
                    Query_8657   181  AGAACTGGCTGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATGAAGCCAGGGTTCGGGGAA  270
V  92.8% (232/250)  IGHV3-48*03  227  ......CA...........A..................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-10*01  11   -------------------------------------------------------------------------------..........-  20

                                      -IMGT----------------------->                                 
                                      I  F  P  Y  Y  C  G  M  D  V  W  G  Q  G  T  T  V  T  I  S  S 
                    Query_8657   271  TTTTCCCATACTACTGCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCATCTCCTCA  332
J  96.3% (52/54)    IGHJ6*02     9    --------.......A.....................................G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_1958

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_8658   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.9% (229/244)  IGHV4-59*01  49   .......................................AG....T..............A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8658   91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.9% (229/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_8658   181  CAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.9% (229/244)  IGHV4-59*01  229  ...................G...........................G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_8658   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_1959

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           311     4e-87
IGHD4-4*01                                                                                            19.9    0.15 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATCAGC	CAGTAACTAC	TCTCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCAGCCAGTAACTACTCTCGGCTAC	ARNQPVTTLGY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  T  V  S  N  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_8659   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGGTCACCGTCAGTAACAACTATATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.6% (222/245)  IGHV3-53*01  47   ................................T............G......C....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  L  S  V  M  Y  S  R  G  A  T  R  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  S  S  K  
                    Query_8659   91   AGTGGCTCTCAGTCATGTATAGTCGTGGAGCCACAAGGTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  90.6% (222/245)  IGHV3-53*01  137  .....G.......T..T.....CG....TAG....TAC................A..........................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      N  T  V  Y  L  Q  M  K  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  N  Q  P  V  T  T  L  G  
                    Query_8659   181  ACACGGTGTATCTTCAAATGAAAAACCTGAGAGTCGAGGACACGGCCGTCTATTACTGTGCGAGAAATCAGCCAGTAACTACTCTCGGCT  270
V  90.6% (222/245)  IGHV3-53*01  227  .....C................C.G........C...............G...............-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (10/10)   IGHD4-4*01   7    ------------------------------------------------------------------------..........--------  16
J  97.4% (37/38)    IGHJ4*02     11   ----------------------------------------------------------------------------------------..  12

                                      ->                                  
                                      Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_8659   271  ACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.4% (37/38)    IGHJ4*02     13   .........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_285258

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           329     3e-92
IGHD3-9*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCGGTT	GTATTACGATATCTTG	CGGCGGGGAGG	CTACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGTTGTATTACGATATCTTGCGGCGGGGAGGCTACAACGGTTTGGACGTC	ARGRLYYDILRRGGYNGLDV	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  V  G  S  F  S  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_8660   4    CCCTGAGACTCTCCTGTGCTGTCTATGTTGGGTCCTTCAGTGATTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  93.0% (227/244)  IGHV4-34*01  50   .....TCC...A....C..........G..............G...............................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  S  N  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_8660   94   GGATTGGCGAAATCAATCATAGTGGATCCAACAGCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAACC  183
V  93.0% (227/244)  IGHV4-34*01  140  .......G..................AG..C..A.......................................A................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      Q  F  S  L  K  L  D  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  L  Y  Y  D  I  L  R  
                    Query_8660   184  AGTTCTCCCTGAAGCTGGACTCCGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCCGGTTGTATTACGATATCTTGCGGC  273
V  93.0% (227/244)  IGHV4-34*01  230  .................AG...T.......................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  93.8% (15/16)    IGHD3-9*01   1    ----------------------------------------------------------------------............T...----  16

                                      T------------------------>                                 
                                      R  G  G  Y  N  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8660   274  GGGGAGGCTACAACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  96.2% (50/52)    IGHJ6*02     11   -------....T.....A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_32558

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD3-22*01                                                                                           43.0    2e-08
IGHJ3*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TATCACTGC	TTACTATGATAGTAGTGGTTAT	A	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATATCACTGCTTACTATGATAGTAGTGGTTATAATGCTTTTGATATC	VRDITAYYDSSGYNAFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  L  R  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8661   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCCTTAGGAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-23*01  47   ...................................A..T....C..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  D  S  S  L  S  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8661   91   AGTGGGTCTCAGGTATTAGTGATAGCAGTCTTAGTACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATTTCCAGAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-23*01  137  ............C........G...TG..GG...C...T..................................C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  V  Q  M  N  R  V  R  A  A  D  T  A  V  Y  Y  R  V  R  D  I  T  A  Y  Y  D  
                    Query_8661   181  AGAACACGCTGTATGTGCAAATGAACAGAGTGAGAGCCGCGGACACGGCCGTATATTACCGTGTGAGAGATATCACTGCTTACTATGATA  270
V  92.0% (230/250)  IGHV3-23*01  227  ..............C.............CC.........A...................T...C..A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (22/22)   IGHD3-22*01  4    -------------------------------------------------------------------------------...........  14

                                      IMGT--------------------->                                  
                                      S  S  G  Y  N  A  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8661   271  GTAGTGGTTATAATGCTTTTGATATCTGGGGCCAAGGGACATTGGTCACCGTCTCTTCAG  330
D  100.0% (22/22)   IGHD3-22*01  15   ...........-------------------------------------------------  25
J  97.9% (47/48)    IGHJ3*02     3    ------------.............................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_294795

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           353     1e-99
IGHD3-3*01                                                                                            25.7    0.003
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTTTCCGGGAAG	TACGATTTTGGGAGTG	CCTTAGGGGGTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTTTCCGGGAAGTACGATTTTGGGAGTGCCTTAGGGGGTCTTGACTAC	AKDLSGKYDFGSALGGLDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  H  Y  G  V  H  W  V  R  Q  A  P  A  K  G  L  
                    Query_8662   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTCACTATGGGGTGCACTGGGTCCGCCAGGCTCCAGCCAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-30*18  47   ....................G.......................AG......CA........................G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  T  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8662   91   AGTGGGTGGCACTTATAACATACGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (238/250)  IGHV3-30*18  137  ...........G.....T....T...................................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  L  S  G  K  Y  D  
                    Query_8662   181  AGAACACGGTGTATCTGCAAATGAACAGCCTGAGACCTGAGGACACGGCTGTATATTACTGTGCGAAAGATCTTTCCGGGAAGTACGATT  270
V  95.2% (238/250)  IGHV3-30*18  227  ........C..........................G................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD3-3*01   5    -----------------------------------------------------------------------------------.......  11

                                      -IMGT----------------------->                                  
                                      F  G  S  A  L  G  G  L  D  Y  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_8662   271  TTGGGAGTGCCTTAGGGGGTCTTGACTACTGGGGCCAGGGCACCCTGATCACCGTCTCCTCAG  333
D  93.8% (15/16)    IGHD3-3*01   12   ..T......------------------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    ---------------------...................A......G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_294791

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           372     2e-105
IGHD6-19*01                                                                                           12.2    34    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	GCTCCAG	GGCTGG	GATT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCCAGGGCTGGGATTCTTTGACTAT	AAPGLGFFDY	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	262	24	0	91.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  A  S  G  N  T  L  T  N  N
                    Query_8663   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCGTCAGTGAAAGTTGCCTGCAAGGCATCCGGAAACACCCTCACCAACAA  90
V  91.6% (262/286)  IGHV1-46*01  6    ..................G.......................C........G...T.............T...T.....T......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  N  K  T  I  Y  A  Q
                    Query_8663   91   CTTCATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTAATAAGACAATCTATGCACA  180
V  91.6% (262/286)  IGHV1-46*01  96   ..AT..................................................................GG..GC....G...C.....  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  L  T  M  T  R  V  T  S  T  R  T  V  Y  M  E  L  S  N  L  R  S  E  D  T  A
                    Query_8663   181  GAAGTTCCAGGGCAGACTGACCATGACTAGGGTCACGTCCACGAGAACAGTCTACATGGAGCTGAGCAACCTGAGATCTGAGGACACGGC  270
V  91.6% (262/286)  IGHV1-46*01  186  ................G.C........C....A............C......................G.....................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        V  Y  Y  C  A  A  P  G  L  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_8663   271  CGTGTATTACTGCGCGGCTCCAGGGCTGGGATTCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  347
V  91.6% (262/286)  IGHV1-46*01  276  ............T...-------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                              
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------......------------------------------------------------  18
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------.........C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_294792

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8664   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ........................................G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_8664   91   TGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ........G...A..T...............................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y 
                    Query_8664   181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............C....C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8664   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_294793

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           307     1e-85
IGHD1-26*01                                                                                           12.2    31   
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARAKGIAVIVDAFDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	97	17	0	85.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	220	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_8665   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAG  90
V  90.2% (220/244)  IGHV4-59*01  49   ..................A.....................G............................C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  D  P  S  F  K  S  R  V  T  V  S  V  D  M  S  N  N 
                    Query_8665   91   TGGATTGGATATATCTATTACAGAGGGACCACCACCTACGATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAGACATGTCCAACAAC  180
V  90.2% (220/244)  IGHV4-59*01  139  ........G..............T....G.....A....A.C.....CC................CA.A..........C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  K  G  I  A  V  I  V  D 
                    Query_8665   181  CGGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGTGCGAGAGCTAAGGGTATCGCTGTTATAGTAGAT  270
V  90.2% (220/244)  IGHV4-59*01  229  .A...........AG.................T.......CG.....G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------------......----  8
J  91.8% (45/49)    IGHJ3*01     2    ---------------------------------------------------------------------------------------...  4

                                      ----------->                                  
                                       A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_8665   271  GCTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  316
J  91.8% (45/49)    IGHJ3*01     5    .........G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_293225

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*04                                                                                           330     1e-92
IGHD3-10*01                                                                                           19.9    0.17 
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*04	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGGACATGTTAG	GGTTCGGGGA	CTTGGTTCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACATGTTAGGGTTCGGGGACTTGGTTCCCTTTGCCCAC	ARDMLGFGDLVPFAH	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	15	9	0	62.5
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	249	38	0	86.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  D  C  A  A  S  G  F  T  F  S  S  Y
                    Query_8666   1    GCAGCTGGTGCAGTCTGGAGGAGGGTTGGTTCAGCCTGGGGGGTCCCTGAGACTCGACTGTGCAGCCTCTGGATTCACCTTTTCCAGTTA  90
V  86.8% (249/287)  IGHV3-23*04  6    ..........G.......G.....C.....A........................TC.........................AG...C..  95
                                        Q  L  V  E  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  G  D  S  A  A  K  T  Y  Y  A  D
                    Query_8666   91   TGCCATCTCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGGCATCGGTGACAGTGCTGCCAAGACATATTACGCAGA  180
V  86.8% (249/287)  IGHV3-23*04  96   ......GAG............................................CT..TA...GT....G..GT.GC.....C........  185
                                        A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  R  G  R  F  T  I  S  R  D  N  S  R  M  T  V  Y  L  Q  M  N  S  L  R  P  E  D  T  A
                    Query_8666   181  CTCCGTGAGGGGACGATTCACCATCTCCAGAGACAATTCCAGAATGACGGTATATCTGCAAATGAACAGTCTGAGACCCGAGGACACGGC  270
V  86.8% (249/287)  IGHV3-23*04  186  ........A...C..G.........................AG.AC...C.G.................C......G.............  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  F  C  A  R  D  M  L  G  F  G  D  L  V  P  F  A  H  W  G  Q  G  V  L  V  T  V  S  S
                    Query_8666   271  CATGTATTTCTGTGCGAGGGACATGTTAGGGTTCGGGGACTTGGTTCCCTTTGCCCACTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTC  360
V  86.8% (249/287)  IGHV3-23*04  276  .G.A....A........-------------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                           
D  100.0% (10/10)   IGHD3-10*01  11   -----------------------------..........---------------------------------------------------  20
J  90.9% (40/44)    IGHJ4*02     5    ------------------------------------------------.....A.T..............AC..................  46

                                        
                                        
                    Query_8666   361  AG  362
J  90.9% (40/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_293224

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	72	2	0	97.3
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	295	282	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  
                    Query_8667   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCA  93
V  95.6% (282/295)  IGHV5-51*01  2    .................................A...................................G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  T  Y  P  G  D  S  D  I  R  Y  
                    Query_8667   94   ACTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCACGTATCCTGGTGACTCTGATATCAGATACA  183
V  95.6% (282/295)  IGHV5-51*01  92   G...........G...........................C...................TC...................C........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  
                    Query_8667   184  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACA  273
V  95.6% (282/295)  IGHV5-51*01  182  ...........C.....................................C...........G......A.....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  
                    Query_8667   274  CCGCCATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  363
V  95.6% (282/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  92.9% (13/14)    IGHD1-26*01  4    ---------------------------------..........C...-------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    --------------------------------------------------.......A................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_8667   364  CGGTCACCGTCTCCTCA  380
J  98.2% (56/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_293227

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            318     6e-89
IGHD6-13*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCTCGCCACAGAA	AGCAGCAGCT	ATAACTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCTCGCCACAGAAAGCAGCAGCTATAACTTACTACTTTGACTAC	ARVSPQKAAAITYYFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  V  G  S  I  T  S  A  N  W  W  S  W  V  R  Q  P  P  G  R  G  L 
                    Query_8668   1    ACCCTGTCCCTCACCTGCGATGTCTCTGTTGGCTCCATCACCAGTGCTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAGGGGACTG  90
V  91.1% (225/247)  IGHV4-4*02   49   ...................C........G...........G....AG...................................A...G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  K  S  N  Y  S  P  S  L  R  G  R  V  P  I  S  V  D  K  S  M 
                    Query_8668   91   GAGTGGATTGGGGAAATCTATCATGGTGGGAAGTCCAACTACAGTCCGTCCCTCAGGGGTCGCGTCCCCATTTCAGTGGACAAGTCCATG  180
V  91.1% (225/247)  IGHV4-4*02   139  ........................A......GCA.........AC..........A.A....A...A....A.....A..........A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  P  Q  K  A  A  A 
                    Query_8668   181  AACCAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTCTCGCCACAGAAAGCAGCAGCT  270
V  91.1% (225/247)  IGHV4-4*02   229  .......................C...........C...............................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (10/10)   IGHD6-13*01  7    --------------------------------------------------------------------------------..........  16

                                      -------------------->                                  
                                       I  T  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8668   271  ATAACTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_293226

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           400     9e-114
IGHD3-3*01                                                                                            33.4    2e-05 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGGGGGGCCTT	CGATTTTTGGAGTGGTT	TCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGGGGGGCCTTCGATTTTTGGAGTGGTTTCCACTTTGACTCC	ARLGGAFDFWSGFHFDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  T  S  G  Y  S  F  T  T  H
                    Query_8669   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGCTTTACCACCCA  90
V  94.1% (273/290)  IGHV5-51*01  6    .............................A..................................GG....................G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  M  G  I  I  Y  P  G  V  S  D  T  R  Y  R  P
                    Query_8669   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACATGGGGATCATCTATCCTGGTGTCTCTGATACCAGATACAGACC  180
V  94.1% (273/290)  IGHV5-51*01  96   ........G...................................GG......................A..................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_8669   181  GTCCTTCCAAGGCCAAGTCACCATCTCAGCCGACAAGTCCGTCAGTACCGCCTACCTGCAGTGGGGGAGCTTGAAGGCCTCGGACACCGC  270
V  94.1% (273/290)  IGHV5-51*01  186  ...............G........................A....C..................A.C...C...................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  L  G  G  A  F  D  F  W  S  G  F  H  F  D  S  W  G  Q  G  T  L  V  T  V
                    Query_8669   271  CATGTATTATTGTGCGAGACTAGGGGGGGCCTTCGATTTTTGGAGTGGTTTCCACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGT  360
V  94.1% (273/290)  IGHV5-51*01  276  .........C..........----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD3-3*01   7    ---------------------------------.................----------------------------------------  23
J  97.8% (44/45)    IGHJ4*02     4    -----------------------------------------------------.........A...........................  40

                                              
                                        S  S  
                    Query_8669   361  CTCCTCAG  368
J  97.8% (44/45)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_293220

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCCGTTG	ATTACTATGAAAGTACTTGTTATT	CT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGTTGATTACTATGAAAGTACTTGTTATTCTTAC	ARAVDYYESTCYSY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  R  I  S  C  R  V  S  G  D  M  F  G  S  Y
                    Query_8670   1    GCAGCTGGTGCAGTCTGGAGCAGAGCTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGTTTCTGGAGACATGTTCGGCAGTTA  90
V  92.4% (267/289)  IGHV5-51*01  6    .........................G........................A...........A..G.......T...GC..TAC...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_8670   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGCAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  92.4% (267/289)  IGHV5-51*01  96   ........G.....................G...........................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  R  V  T  F  S  V  D  T  S  L  S  T  A  Y  V  Q  W  S  S  L  K  P  S  D  T  A
                    Query_8670   181  GTCATTCCAAGGCCGGGTCACCTTCTCAGTCGACACGTCCCTCAGCACCGCCTACGTGCAGTGGAGCAGCCTGAAGCCCTCGGACACCGC  270
V  92.4% (267/289)  IGHV5-51*01  186  ...C..........A.......A......C.....A....A..............C....................G.............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  A  V  D  Y  Y  E  S  T  C  Y  S  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_8670   271  CATATATTACTGTGCGAGAGCCGTTGATTACTATGAAAGTACTTGTTATTCTTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  359
V  92.4% (267/289)  IGHV5-51*01  276  ...G...............----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  87.5% (21/24)    IGHD3-22*01  3    --------------------------..........T....G.G......---------------------------------------  26
J  97.3% (36/37)    IGHJ4*02     12   ----------------------------------------------------........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_293223

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD4-17*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGACA	AACG	GACTACGGTGA	ATATCCCCTTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCCGACAAACGGACTACGGTGAATATCCCCTTCACTAC	ARQTDYGEYPLHY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	6	2	0	75
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  P  E  V  K  K  S  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  H
                    Query_8671   1    GCAGCTGGTGCAGTCTGGACCAGAGGTGAAAAAGTCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTAGCACCCA  90
V  93.1% (271/291)  IGHV5-51*01  6    ...................G..............C...........................................C....C..G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  L  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  R  Y  S  P
                    Query_8671   91   CTGGATCGGCTGGGTGCGCCAGCTGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGAGACCAGATACAGCCC  180
V  93.1% (271/291)  IGHV5-51*01  96   ......................A....................................................T..............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  E  L  K  P  S  D  T  A
                    Query_8671   181  GTCCTTCCAAGGCCAAGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTATTTACAGTGGAGCGAACTGAAGCCCTCGGACACCGC  270
V  93.1% (271/291)  IGHV5-51*01  186  ...............G............................G.........CC.G.........AGC......G.............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  Q  T  D  Y  G  E  Y  P  L  H  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_8671   271  CATGTATTATTGTGCCCGACAAACGGACTACGGTGAATATCCCCTTCACTACTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  356
V  93.1% (271/291)  IGHV5-51*01  276  .........C.....GA....-----------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (11/11)   IGHD4-17*01  2    -------------------------...........--------------------------------------------------  12
J  97.4% (38/39)    IGHJ4*02     10   -----------------------------------------------.....................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_293229

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           37.2    9e-07
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCTT	CTATGATAGCAGTGGTTATTAC	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCTTCTATGATAGCAGTGGTTATTACCACTTTGACTAT	VVFYDSSGYYHFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	238	1	1	0	0	100
Total	N/A	N/A	238	226	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  A  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8672   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGCCGCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.0% (226/238)  IGHV4-59*01  49   .......................C.......G.T........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8672   91   TGGATTGGTTATATCTATCACAGTGGGACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.0% (226/238)  IGHV4-59*01  139  ........G.........T.........G...............C.............................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  F  Y  D  S  S  G  Y  Y  H 
                    Query_8672   181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGTGGTCTTCTATGATAGCAGTGGTTATTACCAC  270
V  95.0% (226/238)  IGHV4-59*01  229  ...................GC..........................G..T.......--------------------------------  286
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                                  
D  95.5% (21/22)    IGHD3-22*01  7    -----------------------------------------------------------------.........T............---  28
J  95.6% (43/45)    IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_8672   271  TTTGACTATTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  313
J  95.6% (43/45)    IGHJ4*02     6    ........C.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_293228

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           263     2e-72
IGHD2-15*01                                                                                           12.2    34   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTC	ATTGTA	T	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTCATTGTATTACGGTATGGACGTC	ARGVADDGWRGGRRVSLYYGMDV	240	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	125	21	14	7	0	66.7
FR3-IMGT	126	239	114	98	16	0	86
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	206	38	0	84.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  H  C  W  T  W  I  R  Q  T  P  G  K  G  L  E  
                    Query_8673   4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGGTCCTTTAGTGGTCACTGCTGGACCTGGATTCGCCAGACACCAGGGAAGGGACTGGAAT  93
V  84.4% (206/244)  IGHV4-34*01  50   .....TCC...A.........................C......T...A.....G......C......C.C...........G.....G.  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  M  N  H  K  G  R  T  T  Y  N  P  S  L  M  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_8673   94   GGATTGGTGAGATGAATCACAAAGGCAGGACGACCTACAACCCGTCGCTAATGAGTCGAGTCACCATCTCAGTGGACACGTCCAAGAATC  183
V  84.4% (206/244)  IGHV4-34*01  140  .......G..A..C.....T.GT..A..C..C.A............C..C.A...............A.....A..............C.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------------CDR3
                                      Q  L  S  L  R  L  T  S  L  I  A  A  D  T  A  M  Y  Y  C  A  R  G  V  A  D  D  G  W  R  G  
                    Query_8673   184  AGCTCTCCCTGAGATTGACCTCTTTAATCGCCGCGGACACGGCTATGTATTACTGTGCGAGAGGCGTGGCGGATGACGGGTGGCGGGGGG  273
V  84.4% (206/244)  IGHV4-34*01  230  ..T.........AGC...G....G.G.C................G...................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          

                                      -IMGT----------------------------->                                 
                                      G  R  R  V  S  L  Y  Y  G  M  D  V  W  G  Q  G  V  T  V  T  V  S  S 
                    Query_8673   274  GCAGACGCGTGTCATTGTATTACGGTATGGACGTCTGGGGCCAGGGAGTCACGGTCACCGTCTCCTCA  341
D  100.0% (6/6)     IGHD2-15*01  6    -------------......-------------------------------------------------  11
J  91.7% (44/48)    IGHJ6*02     15   --------------------.......................A..GAC...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_101674

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           266     2e-73
IGHD2-15*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	TCTAC	GGATATACTAGTGG	GGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATCTACGGATATACTAGTGGGGGC	AIYGYTSGG	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	12	12	0	50
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	208	38	0	84.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  D  F  S  R  Y  S  V  S  W  I  R  Q  S  P  G  K  G  L  
                    Query_8674   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGTTTAGACTTCAGTAGATATAGTGTGAGCTGGATCCGCCAGTCTCCAGGGAAGGGCCTGG  90
V  84.6% (208/246)  IGHV3-21*01  47   .........................C.....A..CAC.........C.....CA...A....G........G.............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  A  N  G  K  F  D  Y  Y  V  D  S  V  R  G  R  F  T  I  T  R  D  N  A  
                    Query_8674   91   AGTGGGTCTCATCCATCAGTGCTAATGGGAAATTCGACTACTATGTAGACTCAGTGAGGGGCCGATTCACCATCACCAGAGACAACGCCA  180
V  84.6% (208/246)  IGHV3-21*01  137  ................T...AG..G.A.T.GT.A.ATA.....C.C...........A................T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  G  V  F  S  C  A  I  Y  G  Y  T  S  G  G  
                    Query_8674   181  AGAACTCAGTTTATCTGCAGATGAACAGCCTGAGGGCCGAAGACACGGGTGTTTTTTCTTGTGCGATCTACGGATATACTAGTGGGGGCT  270
V  84.6% (208/246)  IGHV3-21*01  227  ........C.G........A..............A.....G.......C...G.A..AC.......------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  85.7% (12/14)    IGHD2-15*01  2    -----------------------------------------------------------------------......TG......-----  15
J  97.1% (34/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------------..  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8674   271  GGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  303
J  97.1% (34/35)    IGHJ4*02     16   .............C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_101675

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8675   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ........................................G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_8675   91   TGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ........G...A..T...............................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y 
                    Query_8675   181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............C....C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8675   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_101676

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           420     7e-120
IGHD5-18*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTTCCCAACCGAAATGTCAAAAC	GTGGATAC	CTGCGCCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTCCCAACCGAAATGTCAAAACGTGGATACCTGCGCCCTCTAC	ARLSQPKCQNVDTCALY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  S  Y
                    Query_8676   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTTCCAGTTA  90
V  96.5% (279/289)  IGHV5-51*03  6    ..................................................................T...............A....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_8676   91   CTGGATCGTCTGGGTGCGCCAGATGCCGGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGGCC  180
V  96.5% (279/289)  IGHV5-51*03  96   ........G..................C...........................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  T  S  L  K  A  S  D  T  A
                    Query_8676   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGACCAGCCTGAAGGCCTCGGACACCGC  270
V  96.5% (279/289)  IGHV5-51*03  186  ............................................................G....G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  A  R  L  S  Q  P  K  C  Q  N  V  D  T  C  A  L  Y  W  G  Q  G  T  L  V  T  V
                    Query_8676   271  CATTTATTATTGTGCGAGACTTTCCCAACCGAAATGTCAAAACGTGGATACCTGCGCCCTCTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  96.5% (279/289)  IGHV5-51*03  276  ...G.....C.........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD5-18*01  1    -------------------------------------------........---------------------------------------  8
J  97.4% (37/38)    IGHJ4*02     11   ------------------------------------------------------------..............................  40

                                              
                                        S  A  
                    Query_8676   361  CTCCGCAG  368
J  97.4% (37/38)    IGHJ4*02     41   ....T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_101677

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           279     3e-77
IGHD2-21*02                                                                                           19.9    0.15 
IGHJ5*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGGCCGGTGTGTCGA	TGGTGACTGC	CACGGATA	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGCCGGTGTGTCGATGGTGACTGCCACGGATACGACCGC	AKGRCVDGDCHGYDR	237	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	11	1	0	91.7
CDR1-IMGT	24	47	24	17	7	0	70.8
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	20	4	0	83.3
FR3-IMGT	123	236	114	103	11	0	90.4
CDR3-IMGT (germline)	237	241	5	5	0	0	100
Total	N/A	N/A	230	204	26	0	88.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  T  G  F  D  F  I  Y  S  V  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 
                    Query_8677   12   TGTGCAGCCACTGGATTCGACTTTATCTACTCTGTCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATATATC  101
V  88.7% (204/230)  IGHV3-23*01  64   .........T........AC.....G.AG..A..C......C..........................................GC...T  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  S  G  R  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  G  N  S  N  D  T  L  Y  L 
                    Query_8677   102  AGTGGTAGTGGTCGTAATACATATTACGCAGACTCCGTGAAGGGCCGGTTCACCATTTCCAGAGGCAATTCGAACGACACGCTGTATCTG  191
V  88.7% (204/230)  IGHV3-23*01  154  ............G...GC.....C................................C.......A......C..GA..............  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------CDR3-IMGT----------------->
                                       Q  M  N  S  L  R  V  V  D  T  A  L  Y  Y  C  A  K  G  R  C  V  D  G  D  C  H  G  Y  D  R 
                    Query_8677   192  CAGATGAACAGCCTGAGAGTCGTTGACACGGCCCTATATTACTGTGCGAAGGGCCGGTGTGTCGATGGTGACTGCCACGGATACGACCGC  281
V  88.7% (204/230)  IGHV3-23*01  244  ..A................C..AG.........G................----------------------------------------  293
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  100.0% (10/10)   IGHD2-21*02  13   -----------------------------------------------------------------..........---------------  22
J  95.1% (39/41)    IGHJ5*02     11   -----------------------------------------------------------------------------------.....C.  17

                                                                        
                                       W  G  Q  G  T  L  V  I  V  S  S  
                    Query_8677   282  TGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  315
J  95.1% (39/41)    IGHJ5*02     18   ......................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_101672

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           321     6e-90
IGHD3-16*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	GGTGGAAATTA	TTTGGGG	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGTGGAAATTATTTGGGGGGTATGGACGTC	AGGNYLGGMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  Y  Y  T  M  Y  W  V  R  Q  V  P  G  R  G  L  
                    Query_8678   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATTATTATACCATGTACTGGGTCCGTCAAGTTCCGGGGAGGGGTCTGG  90
V  91.8% (225/245)  IGHV3-43*01  47   ............................................G...........C...............C........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  I  S  W  D  G  E  T  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  G  
                    Query_8678   91   AGTGGGTCTCTCTTATTAGTTGGGATGGTGAGACTACAGACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACACCGGCA  180
V  91.8% (225/245)  IGHV3-43*01  137  ..............................GT.GC...T.............................................A.A...  226
                                      E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  R  S  L  F  L  Q  M  N  S  L  I  S  E  D  T  A  L  Y  Y  C  A  G  G  N  Y  L  G  G  M  
                    Query_8678   181  AAAGGTCCCTCTTTCTGCAGATGAACAGTCTGATAAGTGAAGACACCGCCTTATATTACTGTGCAGGTGGAAATTATTTGGGGGGTATGG  270
V  91.8% (225/245)  IGHV3-43*01  227  ...AC.....G.A......A.............G..C...G...........G............-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  15   ----------------------------------------------------------------------------.......-------  21
J  97.8% (44/45)    IGHJ6*02     18   -----------------------------------------------------------------------------------.......  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8678   271  ACGTCTGGGGCCAAGGGACAACGGTCACCGTCTCCTCA  308
J  97.8% (44/45)    IGHJ6*02     25   ...................C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_101673

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            378     3e-107
IGHD1-26*01                                                                                           12.2    35    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y
                    Query_8679   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACCACTTA  90
V  91.7% (266/290)  IGHV1-8*01   6    ..................G...............................................T........C..........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F  A  Q
                    Query_8679   91   TGATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTTGCACA  180
V  91.7% (266/290)  IGHV1-8*01   96   .................................A..G..............A..............C.G...T..........A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D  T  A
                    Query_8679   181  GAGATTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGACACGGC  270
V  91.7% (266/290)  IGHV1-8*01   186  ..AG...C............................C.....A.................GC............G..C..AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_8679   271  CATATATTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  352
V  91.7% (266/290)  IGHV1-8*01   276  .G.G................--------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   -----------------------------...G.....--------------------------------------------  18
J  100.0% (40/40)   IGHJ5*02     11   ------------------------------------------........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_28978

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAGTTAT	CAGGGT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGGCTCCACCCC	ARSGSGSYQGWLHP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  P  Y  Y  W  I  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8680   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGTCCTTACTACTGGATCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.1% (223/242)  IGHV4-59*01  49   ..................A............G..........AG...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  H  I  F  Y  T  G  S  T  K  Y  K  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  K 
                    Query_8680   91   TGGCTTGGCCATATCTTTTACACTGGGAGCACCAAATACAAGCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCCAGGAAG  180
V  92.1% (223/242)  IGHV4-59*01  139  ...A....GT......A.....G............C.....C..........................A...G............A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  S  Y  Q  G  W 
                    Query_8680   181  CAGTTCTCCCTGAAACTGCGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGG  270
V  92.1% (223/242)  IGHV4-59*01  229  ..............G...A.C.........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (15/15)   IGHD3-10*01  11   ------------------------------------------------------------------...............---------  25
J  87.0% (40/46)    IGHJ5*02     6    ---------------------------------------------------------------------------------------...  8

                                      -------->                                  
                                       L  H  P  W  G  L  G  R  L  V  I  V  S  S  
                    Query_8680   271  CTCCACCCCTGGGGCCTGGGAAGACTGGTCATCGTCTCCTCAG  313
J  87.0% (40/46)    IGHJ5*02     9    T..G............A.....CC.......C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_28979

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	232	12	0	95.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_8681   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  95.1% (232/244)  IGHV4-59*01  50   .....TCC...A...........................G..................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N  
                    Query_8681   94   GGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAACC  183
V  95.1% (232/244)  IGHV4-59*01  140  .......G...A..T...............................................................C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y  
                    Query_8681   184  AGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTACT  273
V  95.1% (232/244)  IGHV4-59*01  230  ..............C....C.......................................A....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD6-13*01  9    ----------------------------------------------------------------..........----------------  18
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8681   274  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_101679

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            439     2e-125
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	286	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_8682   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  98.3% (286/291)  IGHV1-2*04   6    ..................G.............AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_8682   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.3% (286/291)  IGHV1-2*04   96   ..........................................................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  G  R  L  R  S  D  D  T  A
                    Query_8682   181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGGGCAGGCTGAGATCTGACGACACGGC  270
V  98.3% (286/291)  IGHV1-2*04   186  ................................................................A.........................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W  G  Q
                    Query_8682   271  CGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGGGGCCA  360
V  98.3% (286/291)  IGHV1-2*04   276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------------------....A...........................  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_8682   361  AGGGACCACGGTCACCGTCTCCTCA  385
J  98.2% (56/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_282155

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            321     7e-90
IGHD1-26*01                                                                                           12.2    32   
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGAGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGAGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARAKSIAVIVDAFDF	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  A  G  S  I  D  S  S  T  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_8683   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGCTGGCTCCATCGACAGTAGTACCTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.5% (226/247)  IGHV4-4*02   49   ............................G..........AG........A........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  L  G  E  I  D  H  S  G  S  T  T  Y  N  P  S  L  Q  S  R  V  T  I  A  V  D  K  S  N 
                    Query_8683   91   GAGTGGCTTGGCGAAATCGATCATAGTGGGAGCACCACCTACAACCCGTCCCTCCAGAGTCGAGTCACCATAGCGGTGGACAAATCCAAC  180
V  91.5% (226/247)  IGHV4-4*02   139  ......A....G......T..................A................A.................T.A..A.....G.....G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  L  F  S  V  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  K  S  I  A  V  I  V 
                    Query_8683   181  AATCTGTTCTCCGTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCCGTTTATTATTGTGCGAGAGCTAAGAGTATCGCTGTTATAGTA  270
V  91.5% (226/247)  IGHV4-4*02   229  ..C.A.......C.........G...........................G.....C..........-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD1-26*01  3    -----------------------------------------------------------------------------------......-  8

                                      -------------->                                  
                                       D  A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_8683   271  GATGCTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  319
J  91.8% (45/49)    IGHJ3*01     2    ............G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_311795

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           319     2e-89
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAG	TGGAACGAC	GGG	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGAGTGGAACGACGGGGACGAC	ARHEWNDGDD	246	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  D  S  I  S  N  N  L  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_8684   4    CCCTGAGACTCTCCTGTAGTGTCTCTGGAGACTCCATCAGCAATAATCTTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  90.8% (227/250)  IGHV4-39*01  50   .....TCC...A....C.C.........T.G...........G..G.AG.......................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  A  I  Y  Y  T  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_8684   94   TGGAGTGGATTGGAGCTATCTATTATACTGGAAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCA  183
V  90.8% (227/250)  IGHV4-39*01  140  .............GAG...........G...G.G........................................................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  K  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  E  W  N  D  G  D  
                    Query_8684   184  AGAACAAGTTCTCCCTGAAGCTGACCTCTGTCACCGCCGCAGACACGGCTGTGTACTACTGTGCGAGACATGAGTGGAACGACGGGGACG  273
V  90.8% (227/250)  IGHV4-39*01  230  .....C..................G......G.......................T..............--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD1-1*01   9    --------------------------------------------------------------------------.........-------  17
J  97.5% (39/40)    IGHJ4*02     9    --------------------------------------------------------------------------------------...T  12

                                      ->                                  
                                      D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8684   274  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.5% (39/40)    IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_282157

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           367     6e-104
IGHD5-18*01                                                                                           18.0    0.60  
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-18*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTGGGGGGGGGGT	TGGATACCCCTATGG	CCGGGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTGGGGGGGGGGTTGGATACCCCTATGGCCGGGGCTGGTATTTCGATCTC	ARGGGGVGYPYGRGWYFDL	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  S  Y  D  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8685   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTAGTTATGACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-48*03  47   ...................................A................A.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  G  G  G  T  I  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_8685   91   AGTGGGTTTCATACATTAGTACTGGTGGAGGTACCATATACTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (242/249)  IGHV3-48*03  137  .....................G.A....TA...........................A................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  G  G  V  G  Y  
                    Query_8685   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGTGGGGGGGGGGTTGGATACC  270
V  97.2% (242/249)  IGHV3-48*03  227  .....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD5-18*01  2    ----------------------------------------------------------------------------------.......A  9

                                      -IMGT----------------------->                                  
                                      P  Y  G  R  G  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8685   271  CCTATGGCCGGGGCTGGTATTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  333
D  86.7% (13/15)    IGHD5-18*01  10   G......--------------------------------------------------------  16
J  98.0% (49/50)    IGHJ2*01     4    -------------......C...........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_311797

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           288     5e-80
IGHD2-8*02                                                                                            19.9    0.16 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGATGCGGCGGAGCGAAATCA	GTACTGGTGG	GG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATGCGGCGGAGCGAAATCAGTACTGGTGGGGACTACTTTGACCGC	ARMRRSEISTGGDYFDR	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  V  P  Y  L  W  S  W  V  R  Q  H  P  V  K  G 
                    Query_8686   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATAAGAAGTGTTCCTTACCTCTGGAGCTGGGTCCGCCAGCACCCAGTGAAGGGC  90
V  87.4% (215/246)  IGHV4-31*03  49   ......................................C..C....G.GG....TA..........A...............G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  Y  M  Y  Y  S  G  S  N  R  Y  N  P  S  L  K  S  R  V  S  M  S  L  D  T  S 
                    Query_8686   91   CTGGAGTGGATTGCATACATGTACTACAGTGGGAGTAATCGCTACAACCCGTCCCTCAAGAGTCGAGTTTCCATGTCGCTAGACACGTCT  180
V  87.4% (215/246)  IGHV4-31*03  139  .............GG.....C..T...........C.CCTA............................A....A..AG...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       R  N  Q  F  S  L  R  L  T  S  M  T  A  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  I  S 
                    Query_8686   181  AGGAACCAGTTCTCCCTAAGGCTGACCTCTATGACGGCCGCGGACACGGCCATCTACTACTGTGCGCGGATGCGGCGGAGCGAAATCAGT  270
V  87.4% (215/246)  IGHV4-31*03  229  .A...............G.A.....G....G....T...............G.G..T.........------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (10/10)   IGHD2-8*02   9    ----------------------------------------------------------------------------------------..  10

                                      MGT-------------------->                                  
                                       T  G  G  D  Y  F  D  R  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_8686   271  ACTGGTGGGGACTACTTTGACCGCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  328
D  100.0% (10/10)   IGHD2-8*02   11   ........--------------------------------------------------  18
J  91.7% (44/48)    IGHJ4*02     1    ----------...........TA.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_175909

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           269     2e-74
IGHD1-26*01                                                                                           10.3    119  
IGHJ2*01                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD1-26*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGACAAGGGGTCT	TGGGA	N/A	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAAGGGGTCTTGGGATGGTTCTGCGATCGC	ARRQGVLGWFCDR	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	60	33	26	4	3	78.8
FR2-IMGT	61	111	51	44	7	0	86.3
CDR2-IMGT	112	129	21	12	6	3	57.1
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	252	216	30	6	85.7


Alignments

                                      <--------FR1-IMGT---------><-----------CDR1-IMGT-----------><--------------------FR2-IMGT-
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  S  A  G  H  Y  W  S  W  I  R  Q  T  P  G  K 
                    Query_8687   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGCAGTGCTGGTCACTATTGGAGTTGGATCCGCCAGACCCCCGGAAAG  90
V  85.7% (216/252)  IGHV4-31*03  49   ...............................G............---..G....T....C.....C............CA...A..G...  135
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S     G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K 

                                      --------------------><-----CDR2-IMGT-----><-----------------------------------------------
                                       G  L  E  W  M  G  Y  I  F  Y  T  V     P  Y  Y  N  P  S  L  K  S  R  L  T  M  S  G  D  T 
                    Query_8687   91   GGCCTGGAGTGGATGGGTTACATCTTTTATACTGTGC---CATACTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCAGGAGACACC  177
V  85.7% (216/252)  IGHV4-31*03  136  ..............T..G.......A...C.G..G.AGCA.C..............C............G.T.....A....T......G  225
                                       G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T 

                                      -----FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT
                                       A  K  N  Q  F  S  L  R  R  T  F  V  T  S  A  D  T  A  V  Y  Y  C  A  R  R  Q  G  V  L  G 
                    Query_8687   178  GCTAAGAACCAGTTTTCCCTGAGGCGGACCTTTGTGACTTCCGCGGACACGGCCGTGTATTACTGTGCGAGACGACAAGGGGTCTTGGGA  267
V  85.7% (216/252)  IGHV4-31*03  226  T.............C.......A..T..G..C.......G................................------------------  297
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                   
D  100.0% (5/5)     IGHD1-26*01  8    -------------------------------------------------------------------------------------.....  12

                                      -------------->                                  
                                       W  F  C  D  R  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8687   268  TGGTTCTGCGATCGCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  316
J  93.9% (46/49)    IGHJ2*01     5    ....A..T.....T...................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_175908

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD3-10*01                                                                                           12.2    32   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_8688   1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  87.0% (214/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_8688   91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCACCATCTCAGTAGACAAGTCCAAG  180
V  87.0% (214/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A................A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_8688   181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  87.0% (214/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_8688   271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_311792

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           346     2e-97
IGHD2-15*01                                                                                           33.4    2e-05
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATGAAA	GATATTGTAGTGAAGGTAGTTGCTAC	CCTACA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTACCCTACATACTTTGACTTC	ARYERYCSEGSCYPTYFDF	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	255	34	0	88.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  K  I  S  C  K  T  S  G  Y  S  F  S  N  Y
                    Query_8689   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAAAAGCCCGGGCAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGTTTCAGCAACTA  90
V  88.2% (255/289)  IGHV5-51*01  6    .....................A..................G.......................GG............C..T.C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  S  G  E  G  L  E  W  M  G  I  I  Y  A  G  D  S  D  I  T  Y  S  P
                    Query_8689   91   TTGGATCGGCTGGGTGCGCCAGATGTCCGGTGAAGGCCTGGAGTGGATGGGAATCATCTATGCTGGCGACTCTGACATTACATATAGTCC  180
V  88.2% (255/289)  IGHV5-51*01  96   C........................C....GA...................G.........C....T........T.CC.G...C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  R  V  T  I  S  V  D  K  A  I  D  T  A  Y  V  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8689   181  GTCCTTTGAGGGCCGGGTCACCATCTCAGTCGACAAGGCCATCGACACCGCCTACGTACAGTGGAGCAGTCTGAAGGCCTCGGACACCGC  270
V  88.2% (255/289)  IGHV5-51*01  186  ......CC.A....A..............C.......T.....AG..........C.G...........C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        T  Y  Y  C  A  R  Y  E  R  Y  C  S  E  G  S  C  Y  P  T  Y  F  D  F  W  G  Q  G  T  P  V
                    Query_8689   271  CACATATTACTGTGCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTACCCTACATACTTTGACTTCTGGGGCCAGGGAACCCCGGT  360
V  88.2% (255/289)  IGHV5-51*01  276  ..TG...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  88.5% (23/26)    IGHD2-15*01  3    --------------------------............GT.....C......--------------------------------------  28
J  95.7% (44/46)    IGHJ4*02     3    ----------------------------------------------------------..........A.................T...  34

                                                    
                                        T  V  S  S  
                    Query_8689   361  CACCGTCTCCTCAG  374
J  95.7% (44/46)    IGHJ4*02     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_311793

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           288     5e-80
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCACCGGTGG	AGCAATGGCTGG	GGAACATCCTATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCACCGGTGGAGCAATGGCTGGGGAACATCCTATAACTACGGTATGGACGCC	ARGHRWSNGWGTSYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	21	3	6	70
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	218	24	6	87.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  T  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_8690   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGCCCTTCACTGACAGTGGTTATTATTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  87.9% (218/248)  IGHV4-34*12  49   .......................C..T......T......------.......C..C....G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  I  I  S  I  D  T  S 
                    Query_8690   91   CTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAACCCGTCCCTCCAGAGTCGAGTCATCATATCAATAGACACTTCC  180
V  87.9% (218/248)  IGHV4-34*12  133  .....G.............T.......AG.....G......................A............C.......G.......G...  222
                                       L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  K  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  W  S  N  G 
                    Query_8690   181  AAGAAGCAGTTCTCCCTGAAATTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTATTGTGCGAGGGGCCACCGGTGGAGCAATGGC  270
V  87.9% (218/248)  IGHV4-34*12  223  .....C..............GC...............................G.....C........----------------------  290
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  S  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_8690   271  TGGGGAACATCCTATAACTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  94.0% (47/50)    IGHJ6*02     13   ----------------...............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_175905

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     6e-96
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGATCACACTA	TATTACTATGATAGTAGTG	CCCGATCGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGATCACACTATATTACTATGATAGTAGTGCCCGATCGTACTACTTTGACTAC	ARSITLYYYDSSARSYYFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8691   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (233/248)  IGHV3-21*01  47   ..........................................G..G....A.....A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  E  S  G  T  Y  I  Y  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  A  
                    Query_8691   91   AGTGGGTCTCATCCATTAGTGAGAGTGGGACTTACATATACTACGCTGACTCCGTGAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (233/248)  IGHV3-21*01  137  ....................AGT...A.T.G...............A.....A............T........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  I  T  L  Y  Y  Y  
                    Query_8691   181  AGAACTCACTGTATCTGCAAATGAGCAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGATCGATCACACTATATTACTATG  270
V  94.0% (233/248)  IGHV3-21*01  227  ........................A...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (19/19)   IGHD3-22*01  2    --------------------------------------------------------------------------------..........  11

                                      R3-IMGT------------------------>                                  
                                      D  S  S  A  R  S  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8691   271  ATAGTAGTGCCCGATCGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  100.0% (19/19)   IGHD3-22*01  12   .........---------------------------------------------------------  20
J  100.0% (48/48)   IGHJ4*02     1    ------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_175904

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	232	12	0	95.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_8692   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  95.1% (232/244)  IGHV4-59*01  50   .....TCC...A...........................G..................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N  
                    Query_8692   94   GGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAACC  183
V  95.1% (232/244)  IGHV4-59*01  140  .......G...A..T...............................................................C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y  
                    Query_8692   184  AGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTACT  273
V  95.1% (232/244)  IGHV4-59*01  230  ..............C....C.......................................A....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD6-13*01  9    ----------------------------------------------------------------..........----------------  18
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8692   274  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_175907

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           361     4e-102
IGHD6-13*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-13*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGA	GGGTATAG	GAAGGTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGAGGGTATAGGAAGGTGGACGGTATGGACGTC	ERGRV*EGGRYGR	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	105	52	50	1	1	96.2
CDR2-IMGT	106	129	24	21	3	0	87.5
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	243	7	1	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><---------------------FR2-IMGT-------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  E  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_8693   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAATTATGAAATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (243/251)  IGHV3-48*03  47   .............................................G...........A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      --------------><-------CDR2-IMGT------><--------------------------------------------------
                                      E  W  V  F  I  H  *  *  *  G  *  Y  Q  I  L  R  R  L  C  E  G  P  I  H  R  L  Q  R  Q  R  
                    Query_8693   91   AGTGGGTTTTCATACATTAGTAGTAGGGGTAGTATCAAATACTACGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCC  180
V  96.8% (243/251)  IGHV3-48*03  137  .........-................T.......C..T..................................A.................  225
                                      E  W  V   S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                      Q  E  L  T  V  S  A  N  E  Q  P  E  S  R  G  H  G  C  L  L  L  C  E  R  G  R  V  *  E  G  
                    Query_8693   181  AAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGAGAGGGAGGGTATAGGAAGGTG  270
V  96.8% (243/251)  IGHV3-48*03  226  .....................................C.................................-------------------  296
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD6-13*01  1    ---------------------------------------------------------------------------........-------  8

                                      -------------->                                 
                                      G  R  Y  G  R  L  G  P  R  D  H  G  H  R  L  L  
                    Query_8693   271  GACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  100.0% (47/47)   IGHJ6*02     16   -...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_175906

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            282     3e-78
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	98	16	0	86
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	213	33	0	86.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_8694   1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  86.6% (213/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_8694   91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCACCATCTCAGTAGACAAGTCCAAG  180
V  86.6% (213/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A................A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  R  A  G  H  L  A  T  R  G  T  R 
                    Query_8694   181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCCGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  86.6% (213/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G.T.T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_8694   271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_311798

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           338     5e-95
IGHD2-15*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACGA	CCCTCGGG	GGATACTGTAGGGGGGGT	GGTTGTTCTCCCCAGAACTCCGGAC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGACCCTCGGGGGATACTGTAGGGGGGGTGGTTGTTCTCCCCAGAACTCCGGACTGGACGTC	TTLGGYCRGGGCSPQNSGLDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  S  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8695   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATCCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.9% (231/246)  IGHV3-30*03  47   ............................T....T........................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  S  Y  D  G  V  K  K  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  E  N  S  
                    Query_8695   91   AGTGGGTGGCAATAATATCATATGATGGAGTTAAGAAATATTATGCAGACTCCGTGAAGGGCCGATTCTCCATCTCCAGAGAAAATTCCA  180
V  93.9% (231/246)  IGHV3-30*03  137  ...........G.T...............AG...T.....C...........................A.............C.......  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  H  C  T  T  L  G  G  Y  C  R  G  
                    Query_8695   181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGACCTGAGGACACGGCTCTGTATCACTGTACGACCCTCGGGGGATACTGTAGGGGGG  270
V  93.9% (231/246)  IGHV3-30*03  227  .......G...........................G..............G.....T.....G...------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  83.3% (15/18)    IGHD2-15*01  2    --------------------------------------------------------------------------.....T.....T..T.  17

                                      DR3-IMGT-------------------------->                                 
                                      G  G  C  S  P  Q  N  S  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8695   271  GTGGTTGTTCTCCCCAGAACTCCGGACTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  338
D  83.3% (15/18)    IGHD2-15*01  18   ..------------------------------------------------------------------  19
J  100.0% (41/41)   IGHJ6*02     22   ---------------------------.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_282158

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*03                                                                                           324     8e-91
IGHD3-22*01                                                                                           16.1    2.4  
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGTCTTACGGGAGG	ATTACTCTGGTAGT	GGTCGTCAGTCAACCTCCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGTCTTACGGGAGGATTACTCTGGTAGTGGTCGTCAGTCAACCTCCCCCTACTATTACTATGCTATGGACGTC	ARVLREDYSGSGRQSTSPYYYYAMDV	243	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  R  N  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8696   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTCAGCAGGAACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTAG  90
V  91.9% (227/247)  IGHV3-74*03  47   .....................C.....................T..CT........................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  V  N  T  D  G  T  E  T  T  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_8696   91   TGTGGGTCTCACGTGTTAATACTGATGGGACTGAAACAACGTACGCGGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  91.9% (227/247)  IGHV3-74*03  137  ..............A......G........G.AGC....................................A..................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  L  R  E  D  Y  S  
                    Query_8696   181  AAAACACTCTATATCTACAAATGGACAGTCTGAGAGCCGAGGACACGGCTGTATATTATTGTGCCAGGGTCTTACGGGAGGATTACTCTG  270
V  91.9% (227/247)  IGHV3-74*03  227  .G.....G..G.....G......A............................G.....C.....A..-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  85.7% (12/14)    IGHD3-22*01  3    ---------------------------------------------------------------------------------......A..  11

                                      -------CDR3-IMGT--------------------------------->                                 
                                      G  S  G  R  Q  S  T  S  P  Y  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8696   271  GTAGTGGTCGTCAGTCAACCTCCCCCTACTATTACTATGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  353
D  85.7% (12/14)    IGHD3-22*01  12   A....------------------------------------------------------------------------------  16
J  94.8% (55/58)    IGHJ6*02     5    -------------------------......C.....C.G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_175903

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           307     1e-85
IGHD2-21*02                                                                                           14.1    8.0  
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCAGGA	TGGTGAC	CTCGGATGG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATCAGGATGGTGACCTCGGATGG	GKDQDGDLGW	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  Y  G  V  H  W  I  R  Q  A  P  G  R  G  L  
                    Query_8697   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTCATTATGGCGTACACTGGATCCGCCAGGCTCCAGGCAGGGGACTGG  90
V  89.2% (223/250)  IGHV3-30*18  47   ............................................AGC......A.G......G..................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  S  S  G  S  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_8697   91   AGTGGGTGGCATTCATATCGTCCGGTTCAAGTAATAAATATTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGATTCCA  180
V  89.2% (223/250)  IGHV3-30*18  137  ...........G.T.....A.AT.A.GG............C..T.......................................A......  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      R  N  T  F  Y  L  Q  M  D  S  L  R  V  E  D  T  A  V  Y  F  C  G  K  D  Q  D  G  D  L  G  
                    Query_8697   181  GGAACACGTTTTATCTGCAAATGGACAGCCTGAGAGTTGAGGACACGGCTGTGTATTTTTGTGGGAAAGATCAGGATGGTGACCTCGGAT  270
V  89.2% (223/250)  IGHV3-30*18  227  A.......C.G............A............C....................AC....C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD2-21*02  13   ----------------------------------------------------------------------------.......-------  19

                                      ->                                  
                                      W  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8697   271  GGTGGGGCCGGGGAACCCTGGTCACCGTCTCTTCAG  306
J  94.1% (32/34)    IGHJ4*02     15   --.......A.....................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_175902

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           430     1e-122
IGHD3-22*01                                                                                           23.8    0.013 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGGGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGGGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	291	344	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	70	1	0	98.6
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	110	4	0	96.5
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	291	283	8	0	97.3


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  
                    Query_8698   7    TGCAGCTGGTGCAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACT  96
V  97.3% (283/291)  IGHV3-33*01  5    ...........G..........................................................................AG..  94
                                         Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      F  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  
                    Query_8698   97   TTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAG  186
V  97.3% (283/291)  IGHV3-33*01  95   A.........................................................................................  184
                                      Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  
                    Query_8698   187  ACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGG  276
V  97.3% (283/291)  IGHV3-33*01  185  ......................................T...........C.......................A...............  274
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  

                                      -------------><----------------------CDR3-IMGT--------------------->                      
                                      A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  
                    Query_8698   277  CTGTATATTACTGTGCGAGAGTTTCGCGGGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCA  366
V  97.3% (283/291)  IGHV3-33*01  275  ....G................---------------------------------------------------------------------  295
                                      A  V  Y  Y  C  A  R                                                                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------..........G..G....----------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------------------------------------------------....G............................GG...  38

                                                  
                                      T  V  S  S  
                    Query_8698   367  CCGTCTCTTCAG  378
J  94.0% (47/50)    IGHJ3*02     39   ............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_252208

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           391     5e-111
IGHD2-2*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCACGG	TGTAGTAGTACCAGCTGC	CCTCCT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCACGGTGTAGTAGTACCAGCTGCCCTCCTTATGGACGTC	AKDHGVVVPAALLMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	250	0	0	100


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                     Query_8699   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  100.0% (250/250)  IGHV3-30*18  47   ..........................................................................................  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                     Query_8699   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  100.0% (250/250)  IGHV3-30*18  137  ..........................................................................................  226
                                       E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                       K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  H  G  V  V  V  P  
                     Query_8699   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATCACGGTGTAGTAGTACCAG  270
V  100.0% (250/250)  IGHV3-30*18  227  ......................................................................--------------------  296
                                       K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (18/18)    IGHD2-2*01   8    ----------------------------------------------------------------------------..............  21

                                       T------------------>                                 
                                       A  A  L  L  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                     Query_8699   271  CTGCCCTCCTTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
D  100.0% (18/18)    IGHD2-2*01   22   ....-------------------------------------------------  25
J  100.0% (43/43)    IGHJ6*02     20   ----------...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_252209

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           297     7e-83
IGHD3-9*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGACCCA	TACGGTATTTTG	GCTATTGAGAAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGTGACCCATACGGTATTTTGGCTATTGAGAAG	ATGDPYGILAIEK	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	42	9	0	82.4
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  N  Y  W  S  W  I  R  Q  S  P  A  K  G 
                    Query_8700   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGCCAACTACTGGAGTTGGATCCGCCAATCCCCTGCAAAGGGC  90
V  88.0% (220/250)  IGHV4-31*03  49   .................................................GTT..........C...........GCA...A.GG......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  T  T  E  Y  N  P  S  L  K  S  R  L  T  M  S  I  D  P  S 
                    Query_8700   91   CTCGAGTGGATTGGATACATCTATTATGGTGGGACCACCGAGTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCCATTGACCCGTCT  180
V  88.0% (220/250)  IGHV4-31*03  139  ..G...........G...........CA......G....T.C...........C............G.T.....A..AG.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       T  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  D  P  Y  G  I  L 
                    Query_8700   181  ACGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGTGACCCATACGGTATTTTG  270
V  88.0% (220/250)  IGHV4-31*03  229  .A...................C...G...........................G.............G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD3-9*01   5    ------------------------------------------------------------------------------....A.......  16

                                      ----------->                                
                                       A  I  E  K  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8700   271  GCTATTGAGAAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
J  100.0% (32/32)   IGHJ4*02     15   ------------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_218648

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         346     2e-97
IGHD2-2*02                                                                                            35.3    4e-06
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	GGATATTGTAGTGGTATCAGGTGCTTTACC	GGGGTAG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGGATATTGTAGTGGTATCAGGTGCTTTACCGGGGTAGGGTTCGACCCC	AREGYCSGIRCFTGVGFDP	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	30	25	2	3	83.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	251	238	10	3	94.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  S  V  S  G  D  S  I  S  S  G     Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_8701     1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGCAGTGGG---TACTCCTGGAGCTGGATCCGGCAGCCACCGGGGAAGGGC  87
V  94.8% (238/251)  IGHV4-30-2*01  49   ..................G............G...............TGGT.............................A.........  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  R  S 
                    Query_8701     88   CTGGAGTGGATTGGGTACATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCATTAGACAGGTCC  177
V  94.8% (238/251)  IGHV4-30-2*01  139  ..........................................................................A...G...........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                         T  N  Q  V  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  Y  C  S  G  I 
                    Query_8701     178  ACGAACCAGGTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTACTGTGCCAGAGAGGGATATTGTAGTGGTATC  267
V  94.8% (238/251)  IGHV4-30-2*01  229  .A.......T................C.............................T..............-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.7% (26/30)    IGHD2-2*02     2    ------------------------------------------------------------------------............A...C.  19

                                        3-IMGT----------------------->                                  
                                         R  C  F  T  G  V  G  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8701     268  AGGTGCTTTACCGGGGTAGGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  86.7% (26/30)    IGHD2-2*02     20   ..C....A....----------------------------------------------------  31
J  100.0% (45/45)   IGHJ5*02       7    -------------------.............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_252204

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           346     2e-97
IGHD3-10*01                                                                                           19.9    0.15 
IGHJ1*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAG	ATGGTTGGGGGAG	G	GAATA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGATGGTTGGGGGAGGGAATACTTCCAACAA	ARLDGWGREYFQQ	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	27	24	24	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	126	24	19	5	0	79.2
FR3-IMGT	127	240	114	112	2	0	98.2
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <-------FR1-IMGT-------><-------CDR1-IMGT------><--------------------FR2-IMGT-------------
                                       L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  E  W 
                    Query_8702   4    CTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACGACTTATGCAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGG  93
V  95.5% (232/243)  IGHV3-48*03  52   .....................................GT.G.....A...........................................  141
                                       L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W 

                                      --------><-------CDR2-IMGT------><----------------------------------------------------FR3-
                                       V  S  Y  I  G  D  S  G  R  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N 
                    Query_8702   94   GTTTCATACATTGGTGATAGTGGTAGAACCACATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAAC  183
V  95.5% (232/243)  IGHV3-48*03  142  ............A..AG.........T....T..........................................................  231
                                       V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       S  L  Y  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  R  L  D  G  W  G  R  E  Y  F 
                    Query_8702   184  TCACTGTATCTGCAAATGAACGGCCTGAGAGCCGAGGACACGGCTGTTTATTATTGTGCGAGACTAGATGGTTGGGGGAGGGAATACTTC  273
V  95.5% (232/243)  IGHV3-48*03  232  .....................A...............................C.........---------------------------  294
                                       S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                            
D  92.3% (12/13)    IGHD3-10*01  9    -------------------------------------------------------------------......C......----------  21
J  91.8% (45/49)    IGHJ1*01     4    ---------------------------------------------------------------------------------.........  12

                                      ----->                                  
                                       Q  Q  W  G  Q  G  S  L  V  S  V  S  S  
                    Query_8702   274  CAACAATGGGGCCAGGGCTCCCTGGTCTCCGTCTCCTCAG  313
J  91.8% (45/49)    IGHJ1*01     13   ..G..C............A........A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_218647

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8703   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_8703   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_8703   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8703   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_218644

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            308     4e-86
IGHD3-22*01                                                                                           16.1    2.3  
IGHJ3*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGCCTCCCCGACCGTGGGGC	ATGATGGTAGT	CTTTACTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGCCTCCCCGACCGTGGGGCATGATGGTAGTCTTTACTATGATGCTTTCGATGTC	ARDASPTVGHDGSLYYDAFDV	241	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	22	4	0	84.6
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	126	24	16	8	0	66.7
FR3-IMGT	127	240	114	104	10	0	91.2
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	247	222	25	0	89.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  S  A  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_8704   2    CCCTGTCCCTCACCTGTGCAGCCTCTGGATTCACCTTTAGTGCCTATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  89.9% (222/247)  IGHV3-7*01   50   .....AGA...T.............................AG...........G...................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  A  N  I  N  R  D  E  S  R  I  H  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  
                    Query_8704   92   GGGTGGCCAACATAAATCGCGATGAGAGTCGGATACACTTTGCGGACTCTGTGAAGGGCCGTTTCACCATCTCCAGAGACAACGCCAAGC  181
V  89.9% (222/247)  IGHV3-7*01   140  ................G.AA....GA...GA..A.T...A..T..................A...........................A  229
                                      W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><--------------------------CDR3
                                      H  S  L  Y  L  Q  L  N  R  L  R  A  D  D  T  A  I  Y  Y  C  A  R  D  A  S  P  T  V  G  H  
                    Query_8704   182  ACTCACTGTATCTGCAACTGAACAGACTGAGAGCCGACGACACGGCTATATATTACTGTGCGAGAGACGCCTCCCCGACCGTGGGGCATG  271
V  89.9% (222/247)  IGHV3-7*01   230  .................A.......C...........G.........G.G.................-----------------------  296
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  90.9% (10/11)    IGHD3-22*01  9    ---------------------------------------------------------------------------------------...  11

                                      -IMGT-------------------------->                                  
                                      D  G  S  L  Y  Y  D  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8704   272  ATGGTAGTCTTTACTATGATGCTTTCGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  337
D  90.9% (10/11)    IGHD3-22*01  12   ..A.....----------------------------------------------------------  19
J  98.0% (49/50)    IGHJ3*01     1    ----------------.........T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_218645

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	RETAAGMGWTTLTT	237	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	101	51	49	1	1	96.1
CDR2-IMGT	102	122	21	19	2	0	90.5
FR3-IMGT	123	236	114	111	3	0	97.4
CDR3-IMGT (germline)	237	244	8	7	1	0	87.5
Total	N/A	N/A	245	236	8	1	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K   D  W  S
                    Query_8705   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGG-ACTGGAG  89
V  96.3% (236/245)  IGHV4-59*01  49   ........................................G.........................................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                        G  L  V  M  S  I  T  V  G  A  P  T  T  T  P  P  S  R  V  E  S  P  Y  Q  *  T  G  P  R  T
                    Query_8705   90   TGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  179
V  96.3% (236/245)  IGHV4-59*01  139  ........G...A..T...............................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                        S  S  P  *  R  *  G  L  *  P  L  R  T  R  P  C  I  T  V  R  E  T  A  A  G  M  G  W  T  T
                    Query_8705   180  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTAC  269
V  96.3% (236/245)  IGHV4-59*01  229  ...............C....C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                        L  T  T  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_8705   270  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_218642

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD5-18*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              75.7    5e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATAGTC	ATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATAGTCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8706   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.9% (238/243)  IGHV4-59*01  49   ...............................G.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  N  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8706   91   TGGATTGGGTATATCTACAACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  .................TT.......................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D 
                    Query_8706   181  CAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATATAGTCATGGTTACGGAGGAGTTGAC  270
V  97.9% (238/243)  IGHV4-59*01  229  ...................G...........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD5-18*01  13   ----------------------------------------------------------------------........------------  20
J  97.6% (41/42)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  A  S  S  
                    Query_8706   271  TACTGGGGCCAGGGAACCCTGGTCACCGCCTCCTCAG  307
J  97.6% (41/42)    IGHJ4*02     12   ............................T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_252201

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           339     2e-95
IGHD1-1*01                                                                                            12.2    31   
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTAC	AEEKRRVPRGTFHY	239	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	23	1	0	95.8
FR3-IMGT	125	238	114	112	2	0	98.2
CDR3-IMGT (germline)	239	246	8	7	1	0	87.5
Total	N/A	N/A	233	225	8	0	96.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  I  T  F  T  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 
                    Query_8707   14   TGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCCATT  103
V  96.6% (225/233)  IGHV3-23*01  64   ...............T.........G..G.........................................................T...  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  K  N  T  L  Y  L 
                    Query_8707   104  AGTGGTGGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGAAGAACACGCTGTATCTG  193
V  96.6% (225/233)  IGHV3-23*01  154  ......A......................................................G.........C..................  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><----------------CDR3-IMGT--------------->   
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  G  T  F  H  Y  W 
                    Query_8707   194  CAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTACTGG  283
V  96.6% (225/233)  IGHV3-23*01  244  ................................................A....-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (6/6)     IGHD1-1*01   12   -------------------------------------------------------......-----------------------------  17
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------------------------------------....G........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_8707   284  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  314
J  97.7% (43/44)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_218640

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           380     1e-107
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ6*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGCA	N/A	GTACTACTATGGTTC	TT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCAGTACTACTATGGTTCTTTGGACCTC	ARQYYYGSLDL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  D  S  L  K  I  S  C  R  G  F  G  Y  S  F  T  S  Y
                    Query_8708   1    GCAGCTGGTGCAGTCTGGAGCAGAGCTGAAAAAGCCCGGGGACTCTCTGAAGATCTCTTGTAGGGGTTTTGGATACAGCTTTACCAGCTA  90
V  91.8% (267/291)  IGHV5-51*01  6    .........................G................G..............C....A.....C.....................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  L  I  F  P  N  D  F  D  A  R  Y  S  P
                    Query_8708   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGTAAAGGCTTGGAGTGGATGGGCCTCATCTTTCCTAATGACTTCGATGCCAGATACAGTCC  180
V  91.8% (267/291)  IGHV5-51*01  96   ..............................G......C.............GA......A....GG.....CT...A..........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  L  S  V  D  K  S  T  S  T  A  Y  L  E  W  S  S  L  K  A  S  D  T  A
                    Query_8708   181  GTCCTTCCAAGGCCAGGTCACCCTCTCAGTCGACAAGTCCACCAGTACCGCCTACCTGGAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  91.8% (267/291)  IGHV5-51*01  186  ......................A......C...........T...C............C.......C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                 
                                        I  Y  Y  C  A  R  Q  Y  Y  Y  G  S  L  D  L  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8708   271  CATTTATTACTGTGCGAGGCAGTACTACTATGGTTCTTTGGACCTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  349
V  91.8% (267/291)  IGHV5-51*01  276  ...G..............A..----------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                             
D  93.3% (14/15)    IGHD3-10*01  1    ---------------------...T...........-------------------------------------------  15
J  97.6% (40/41)    IGHJ6*02     22   --------------------------------------.....G...................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_252203

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     9e-100
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATCGTGGTG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATCGTGGTGACTACTTTGACCAC	ARGLHYYDRGDYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  R  V  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8709   1    ACCCTGTCCCTCACCTGCACTGTCTCTCGTGTCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.2% (238/250)  IGHV4-31*03  49   ...........................G...G...................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_8709   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAATAAGTCCCTCAAGAGTCGAATTACCATATCGGTAGACACGTCT  180
V  95.2% (238/250)  IGHV4-31*03  139  ..................................G............CCC................G..........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R 
                    Query_8709   181  AAGAACCAGTTCTCCCTGACGCTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCCATTACTATGATCGT  270
V  95.2% (238/250)  IGHV4-31*03  229  ...................A.....G...........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (16/18)    IGHD3-22*01  3    ----------------------------------------------------------------------------...........A..  16

                                      ----------------->                                  
                                       G  D  Y  F  D  H  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_8709   271  GGTGACTACTTTGACCACTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  322
D  88.9% (16/18)    IGHD3-22*01  17   A...------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    ----...........T....................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_55866

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            410     1e-116
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGTGAGGAACCAGCTCGTATCCGACTTC	ARAVRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  S  Y
                    Query_8710  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCAGCAGTTA  90
V  95.2% (276/290)  IGHV1-8*01  6    ..................G................................................................C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  E
                    Query_8710  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCAGA  180
V  95.2% (276/290)  IGHV1-8*01  96   ........A.........................................................C.....................C.  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  G  D  T  S  I  T  T  A  Y  M  E  M  S  S  L  N  S  E  D  T  A
                    Query_8710  181  GAAGTTCCAGGGCAGAGTCACCATGACCGGGGACACTTCCATAACCACAGCCTACATGGAGATGAGCAGCCTAAACTCTGAAGACACGGC  270
V  95.2% (276/290)  IGHV1-8*01  186  ............................A..A....C.......G................C..........G.GA.....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  V  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8710  271  CGTGTATTACTGTGCGAGAGCGGTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.2% (276/290)  IGHV1-8*01  276  ....................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_125805

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  C  T  L  T  N  Y
                    Query_8711   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATGCACCTTAACCAACTA  90
V  97.6% (282/289)  IGHV5-51*01  6    ..........................................................................A..G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_8711   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  97.6% (282/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8711   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  H  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8711   271  CATGCATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  97.6% (282/289)  IGHV5-51*01  276  ....T..............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_8711   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_55864

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           363     1e-102
IGHD4-17*01                                                                                           21.8    0.040 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCG	TACGGTGACTA	TGTGGGGTATA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCGTACGGTGACTATGTGGGGTATATTGACTCG	ARAYGDYVGYIDS	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  G  A  Y  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_8712   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTGGTGCTTACTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (240/248)  IGHV4-31*01  49   ...............................G.................G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  H  Y  S  G  N  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  I  D  T  S 
                    Query_8712   91   CTGGAGTGGATTGGGTTCATCCATTACAGTGGGAACACCTACTACAACCCGTCCCTCAAGAGTCTAGTAACCATATCAATAGACACGTCT  180
V  96.8% (240/248)  IGHV4-31*01  139  ................A....T............G.................................T.........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  Y  G  D  Y  V  G 
                    Query_8712   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGCGTACGGTGACTATGTGGGG  270
V  96.8% (240/248)  IGHV4-31*01  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (11/11)   IGHD4-17*01  5    ------------------------------------------------------------------------...........-------  15

                                      ----------->                                  
                                       Y  I  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8712   271  TATATTGACTCGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.2% (40/42)    IGHJ4*02     7    ----......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_55865

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           296     2e-82
IGHD3-10*01                                                                                           10.3    123  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAG	TGCTTTC	GGTTC	TGG	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGTGCTTTCGGTTCTGGACTATTACTTCGGCTTGGACGTC	TRVLSVLDYYFGLDV	249	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	134	30	22	8	0	73.3
FR3-IMGT	135	248	114	101	13	0	88.6
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	222	33	0	87.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  T  S  G  F  S  F  R  D  Y  V  M  S  W  V  R  Q  A  P  G  K  G  P  
                    Query_8713   1    GGTCCCTGAGACTCTCCTGTACGACTTCTGGGTTCAGCTTTCGTGATTATGTTATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGACCGG  90
V  87.1% (222/255)  IGHV3-49*04  47   ......................AG.......A....C....G.........C......C..........................G.T..  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  N  I  R  T  R  G  Y  G  A  A  T  D  Y  A  A  S  V  K  G  R  F  S  I  S  R  D  
                    Query_8713   91   AGTGGGTAGGAAACATTAGGACAAGAGGTTATGGTGCGGCCACAGACTACGCCGCGTCTGTGAAAGGCAGATTCTCCATCTCAAGAGATG  180
V  87.1% (222/255)  IGHV3-49*04  137  ..........TTT......A.GC.A..C........G.A.A.....A...........................A...............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------------CDR3
                                      D  S  E  G  M  A  Y  L  E  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  V  L  S  V  L  
                    Query_8713   181  ATTCCGAAGGTATGGCCTACTTGGAAATGAACAGCCTGAAGACCGAGGACACAGCCGTTTACTATTGTACTAGAGTGCTTTCGGTTCTGG  270
V  87.1% (222/255)  IGHV3-49*04  227  .....A..A.C..C.....TC..C................A.................G..T..C..........---------------  301
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (5/5)     IGHD3-10*01  11   ----------------------------------------------------------------------------------.....---  15

                                      -IMGT----------------->                                 
                                      D  Y  Y  F  G  L  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_8713   271  ACTATTACTTCGGCTTGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  326
J  91.1% (51/56)    IGHJ6*02     7    ....C....A...TA..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_55862

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           360     1e-101
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGGTCC	ATTACTATGATAGTA	CTTCTTACTACGGGAGTCGGTTCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGGTCCATTACTATGATAGTACTTCTTACTACGGGAGTCGGTTCCACTTTGACTAC	ARVVHYYDSTSYYGSRFHFDY	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G 
                    Query_8714   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGA  90
V  96.4% (239/248)  IGHV4-61*01  49   .........................................C........................A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_8714   91   CTGGAGTGGATTGGGTACATCTATTACAGAGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTGGACACGTCC  180
V  96.4% (239/248)  IGHV4-61*01  139  .................T...........T....G.......................................A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  V  H  Y  Y  D  S 
                    Query_8714   181  AAGAACCAGTTCTCCCTGCAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGGTGGTCCATTACTATGATAGT  270
V  96.4% (239/248)  IGHV4-61*01  229  ..................A..C..............................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (15/15)   IGHD3-22*01  3    ----------------------------------------------------------------------------..............  16

                                      CDR3-IMGT-------------------------->                                  
                                       T  S  Y  Y  G  S  R  F  H  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_8714   271  ACTTCTTACTACGGGAGTCGGTTCCACTTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  340
D  100.0% (15/15)   IGHD3-22*01  17   .---------------------------------------------------------------------  17
J  97.8% (44/45)    IGHJ4*02     4    -------------------------.......................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_55863

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            325     3e-91
IGHD2-2*01                                                                                            21.8    0.042
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TATGAC	AGTGGTACCAGTTGCTA	ATAC	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATATGACAGTGGTACCAGTTGCTAATACTTACTACTACTACCACGCTATGGACGCC	ARDMTVVPVANTYYYYHAMDA	234	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	44	24	15	0	9	62.5
FR2-IMGT	45	95	51	51	0	0	100
CDR2-IMGT	96	119	24	22	2	0	91.7
FR3-IMGT	120	233	114	107	7	0	93.9
CDR3-IMGT (germline)	234	241	8	8	0	0	100
Total	N/A	N/A	250	231	10	9	92.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  E  A  S  G  F  T           Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8715  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCT---------ATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  81
V  92.4% (231/250)  IGHV3-7*03  47   .....................C.................TTAGTAGCT..........................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  N  K  D  G  S  E  K  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8715  82   AGTGGGTGGCCAACATAAACAAAGATGGAAGTGAGAAACACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCC  171
V  92.4% (231/250)  IGHV3-7*03  137  ...................GC.................T..................................................A  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------------------C
                                     Q  N  S  V  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  M  T  V  V  P  V  
                    Query_8715  172  AGAATTCAGTGTATCTGCAAATGAGTAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAGAGATATGACAGTGGTACCAGTTG  261
V  92.4% (231/250)  IGHV3-7*03  227  ....C...C...............AC..........................G.................--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.2% (15/17)    IGHD2-2*01  11   ----------------------------------------------------------------------------...A.......C..  24

                                     DR3-IMGT-------------------------->                                 
                                     A  N  T  Y  Y  Y  Y  H  A  M  D  A  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8715  262  CTAATACTTACTACTACTACCACGCTATGGACGCCTGGGGCCAAGGGACTACGGTCACCGTCTCCTCA  329
D  88.2% (15/17)    IGHD2-2*01  25   ...-----------------------------------------------------------------  27
J  93.4% (57/61)    IGHJ6*02    2    -------.............T...G........T...............C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_32163

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           408     4e-116
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ2*01                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTGGA	TACTATGACAGTAGTGGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGTGGATACTATGACAGTAGTGGTTATTACTACGACCTC	ARGGYYDSSGYYYDL	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  S  Y  S  F  S  S  H 
                    Query_8716   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTAGTTACAGTTTTAGCAGCCAC  91
V  95.2% (275/289)  IGHV1-18*04  7    .....................................................................G......CC....C....T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  D  Y  A  R 
                    Query_8716   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGGTGGATCAGCGGTTACAATGGTAACACAGACTATGCACGG  181
V  95.2% (275/289)  IGHV1-18*04  97   ................................A.................A..........C................A.........A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  A  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  T  S  D  D  T  A 
                    Query_8716   182  AAGTTCCAGGGCAGAGTCACCATGACCGCAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGACATCTGACGACACGGCC  271
V  95.2% (275/289)  IGHV1-18*04  187  ...C.......................A.............................................G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  G  G  Y  Y  D  S  S  G  Y  Y  Y  D  L  W  G  R  G  T  L  V  T  V  S  S 
                    Query_8716   272  GTGTATTACTGTGCGCGAGGTGGATACTATGACAGTAGTGGTTATTACTACGACCTCTGGGGCCGGGGAACCCTGGTCACTGTCTCCTCA  361
V  95.2% (275/289)  IGHV1-18*04  277  ...............A...-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  95.2% (20/21)    IGHD3-22*01  5    ------------------------........T............---------------------------------------------  25
J  91.3% (42/46)    IGHJ2*01     8    ---------------------------------------------....T...T...........T..C.....................  52

                                       
                                       
                    Query_8716   362  G  362
J  91.3% (42/46)    IGHJ2*01     53   .  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_317826

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           405     3e-115
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	RDV*ELVLGLTT	283	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	144	51	49	1	1	96.1
CDR2-IMGT	145	168	24	24	0	0	100
FR3-IMGT	169	282	114	107	7	0	93.9
CDR3-IMGT (germline)	283	288	6	6	0	0	100
Total	N/A	N/A	289	276	12	1	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_8717   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  95.5% (276/289)  IGHV5-51*03  6    ...............................A..............................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  E   S  S  I  L  V  T  L  I  P  H  T  A  
                    Query_8717   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGA-ATCATCTATCCTGGTGACTCTGATACCACATACGGCCC  179
V  95.5% (276/289)  IGHV5-51*03  96   ..................................................GG............................G....A....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                      R  P  S  K  A  R  S  P  S  Q  P  T  S  P  S  I  P  P  T  C  S  G  V  A  C  R  P  R  T  S  
                    Query_8717   180  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAATACCGCCTACCTGCAGTGGAGTAGCCTGCAGGCCTCGGACATCGC  269
V  95.5% (276/289)  IGHV5-51*03  186  ............................................GC....................C......A............C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                      P  C  I  T  V  R  D  V  *  E  L  V  L  G  L  T  T  G  V  R  E  P  W  S  P  S  P  Q 
                    Query_8717   270  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGTCAGGGAACCCTGGTCACCGTCTCCTCAG  352
V  95.5% (276/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    ------------------------------------------............C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_159568

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           266     2e-73
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	CCTGTCCCGCGTTATGG	TTTTTGGAATGGTTATT	CCAAAATCTAACTCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCCTGTCCCGCGTTATGGTTTTTGGAATGGTTATTCCAAAATCTAACTCTTTCGACACC	ARGLSRVMVFGMVIPKSNSFDT	240	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	207	37	0	84.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  G  S  L  D  G  H  Y  W  T  W  I  R  Q  A  P  G  K  G  L  E  
                    Query_8718   4    CCCTGAGACTCTCCTGCTCTGTCTCTGGTGGGTCGCTCGATGGTCACTACTGGACCTGGATACGCCAGGCCCCAGGGAAGGGTCTGGAGT  93
V  84.8% (207/244)  IGHV4-34*01  50   .....TCC...A.....G......A.........CT..AG....T.........G......C......C.............G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  S  H  T  G  D  T  N  Y  N  S  S  L  K  S  R  V  G  L  S  V  D  T  S  R  N  
                    Query_8718   94   GGATTGGGGAGATTTCTCATACTGGAGACACCAACTACAACTCGTCCCTCAAGAGTCGAGTCGGCTTGTCAGTTGACACGTCCAGGAACC  183
V  84.8% (207/244)  IGHV4-34*01  140  ..........A..CAA.....G....AG.............C....................AC.A.A.....A..........A.....  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------------CDR3-
                                      Q  F  S  L  K  L  T  S  L  T  G  A  D  T  G  V  Y  Y  C  A  R  G  L  S  R  V  M  V  F  G  
                    Query_8718   184  AGTTCTCCCTGAAGTTGACCTCCCTGACCGGCGCGGACACGGGTGTCTATTACTGTGCGCGAGGCCTGTCCCGCGTTATGGTTTTTGGAA  273
V  84.8% (207/244)  IGHV4-34*01  230  ..............C...G...TG......C...........C...G............A....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  94.1% (16/17)    IGHD3-3*01   10   ---------------------------------------------------------------------------------........G  18

                                      IMGT--------------------------->                                  
                                      M  V  I  P  K  S  N  S  F  D  T  W  G  P  G  V  L  V  T  V  S  S  
                    Query_8718   274  TGGTTATTCCAAAATCTAACTCTTTCGACACCTGGGGCCCGGGAGTCCTGGTTACCGTCTCCTCAG  339
D  94.1% (16/17)    IGHD3-3*01   19   ........----------------------------------------------------------  26
J  88.4% (38/43)    IGHJ5*02     9    -----------------------......C.........A....AC......C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_125806

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           392     2e-111
IGHD3-3*01                                                                                            19.9    0.17  
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCA	GAGTGCTTATTAT	TT	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGATCAGAGTGCTTATTATTTCAACTACTTCGACCCC	TRDQSAYYFNYFDP	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	6	2	0	75
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  T  V  S  C  K  A  S  G  Y  T  F  I  N  Y
                    Query_8719   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGACGGTCTCCTGCAAGGCATCTGGATACACGTTCATCAACTA  90
V  93.1% (271/291)  IGHV1-46*01  6    ..................G.............A.................A...T.......................C....C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  H  P  S  A  G  T  T  Y  Y  A  R
                    Query_8719   91   CTATATACACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCCACCCTAGTGCTGGTACCACATACTACGCACG  180
V  93.1% (271/291)  IGHV1-46*01  96   ......G...................................................A.........G.....G....AG........A  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_8719   181  GAAATTCCAGGGCAGAGTCACCATGACCACGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGTAGCCTGAGATCTGAGGACACGGC  270
V  93.1% (271/291)  IGHV1-46*01  186  ...G.........................G....................................C.......................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  T  R  D  Q  S  A  Y  Y  F  N  Y  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8719   271  CGTTTATTACTGTACAAGAGATCAGAGTGCTTATTATTTCAACTACTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.1% (271/291)  IGHV1-46*01  276  ...G.........G.G.....--------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                       
D  92.3% (12/13)    IGHD3-3*01   16   ------------------------.....G.......----------------------------------------------------  28
J  96.0% (48/50)    IGHJ5*02     2    ---------------------------------------.....GG...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_125801

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           327     9e-92
IGHD6-6*01                                                                                            19.9    0.15 
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-6*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCC	AGTATAGAAGATCGTC	GGCTGGT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCAGTATAGAAGATCGTCGGCTGGTTGCTTTTGATATC	ARPSIEDRRLVAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  R  G  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  Q 
                    Query_8720   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGGGGTTACTACTGGAGCTGGGTCCGTCAGCCCCCAGGGAAGGGGCTGCAG  90
V  93.0% (226/243)  IGHV4-34*01  49   .........................................T..................A....C.....................G..  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  I  N  H  R  G  S  S  Y  H  S  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_8720   91   TGGCTTGGCGAAATCAACCATAGAGGAAGTAGCTATCACAGCCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGTCCAAGAAC  180
V  93.0% (226/243)  IGHV4-34*01  139  ...A....G........T.....T.....C.C.A.CT...A...........................A.....A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  S  I  E  D  R  R  L  V 
                    Query_8720   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGACCCAGTATAGAAGATCGTCGGCTGGTT  270
V  93.0% (226/243)  IGHV4-34*01  229  ...............................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (14/16)    IGHD6-6*01   2    ------------------------------------------------------------------.......C..C.....--------  17
J  100.0% (47/47)   IGHJ3*02     4    -----------------------------------------------------------------------------------------.  4

                                      ----------->                                  
                                       A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8720   271  GCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  316
J  100.0% (47/47)   IGHJ3*02     5    ..............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_342305

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         280     1e-77
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	GGAGTCGTAATTAT	CATGGGAATTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGAGTCGTAATTATCATGGGAATTTCTACTTCGACCAC	ARGSRNYHGNFYFDH	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	44	7	0	86.3
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	214	35	0	85.9


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  I  D  S  V  Y  Y  S  L  N  W  I  R  Q  T  P  L  K  G  
                    Query_8721     4    CCCTGAGACTCTCCTGCGCTGTGTCTGGTGGCTCCATCGACAGTGTTTACTACTCCTTAAACTGGATCCGGCAGACACCACTGAAGGGCC  93
V  85.9% (214/249)  IGHV4-30-2*01  50   .....TCC...A..........C...............AG.....G.GGT.......GG.G.............C.....GG........  139
                                           L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Q  H  S  G  A  T  Y  Y  N  P  S  L  E  S  R  V  S  L  S  V  D  R  S  
                    Query_8721     94   TGGAGTGGATTGGCTACATCCAGCATTCTGGGGCCACCTACTACAACCCGTCCCTCGAGAGTCGGGTCTCCCTTTCAGTAGACCGGTCCA  183
V  85.9% (214/249)  IGHV4-30-2*01  140  .............G......T.T...AG....AG......................A.......A...A..A.A.........A......  229
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        K  S  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  H  C  A  R  G  S  R  N  Y  H  G  
                    Query_8721     184  AGAGCCAGTTCTCCCTGAGGCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATCACTGTGCCAGAGGGAGTCGTAATTATCATGGGA  273
V  85.9% (214/249)  IGHV4-30-2*01  230  ...A..............A.....G...........................G...T............---------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  85.7% (12/14)    IGHD3-3*01     15   ---------------------------------------------------------------------.....G..T.....-------  28

                                        ---------------->                                  
                                        N  F  Y  F  D  H  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_8721     274  ATTTCTACTTCGACCACTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTCAG  324
J  91.5% (43/47)    IGHJ4*02       2    ----......T...T...............C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_317821

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_8722   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_8722   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_8722   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_8722   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_325106

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           280     1e-77
IGHD3-3*01                                                                                            18.0    0.62 
IGHJ6*01                                                                                              27.6    0.002


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGCGGCGGTTGCCGGGCGACGGGGGGTCAGGTGCG	GATCTTTGGAGT	C	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCGGCGGTTGCCGGGCGACGGGGGGTCAGGTGCGGATCTTTGGAGTCCGGTAAGGACGGC	ARGAAVAGRRGVRCGSLESGKDG	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	212	33	0	86.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  H  C  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8723   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTTAGTGGTCACTGCTGGACCTGGATTCGCCAGCCACCAGGGAAGGGACTGGAA  90
V  86.5% (212/245)  IGHV4-34*01  49   ......................................C......T...A.....G......C........C...........G.....G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  M  N  H  K  G  R  T  T  Y  N  P  S  L  M  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8723   91   TGGATTGGTGAGATGAATCACAAAGGCAGGACGACCTACAACCCGTCGCTAATGAGTCGAGTCACCATCTCAGTGGACACGTCCAAGAAC  180
V  86.5% (212/245)  IGHV4-34*01  139  ........G..A..C.....T.GT..A..C..C.A............C..C.A...............A.....A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  L  S  L  S  L  S  S  L  I  A  G  D  T  A  R  Y  Y  C  A  R  G  A  A  V  A  G  R  R  G 
                    Query_8723   181  CAGCTCTCCCTGAGCTTGAGCTCTTTAATCGCCGGGGACACGGCTAGGTATTACTGTGCGAGAGGGGCGGCGGTTGCCGGGCGACGGGGG  270
V  86.5% (212/245)  IGHV4-34*01  229  ...T.........AGC........G.G.C.....C..........GT..................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      3-IMGT----------------------------->                         
                                       V  R  C  G  S  L  E  S  G  K  D  G  W  G  Q  G  V  A  V  T  
                    Query_8723   271  GTCAGGTGCGGATCTTTGGAGTCCGGTAAGGACGGCTGGGGTCAGGGCGTCGCGGTCACCG  331
D  91.7% (11/12)    IGHD3-3*01   8    ----------...T........---------------------------------------  19
J  78.9% (30/38)    IGHJ6*01     17   -----------------------.....T.....T......G..A..GAC.A.........  54


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_325107

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATG	GTATTATTCTGATAACAGTGGTTATT	T	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATGGTATTATTCTGATAACAGTGGTTATTTCTTTGACTCC	AREWYYSDNSGYFFDS	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_8724   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGCCAGTCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...........................................G.....................G...C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  V  Y  Y  T  G  F  T  D  Y  N  P  S  L  K  S  R  I  T  I  S  L  D  T  S  K  N 
                    Query_8724   91   TGGCTTGGGTTTGTCTATTACACTGGATTCACCGACTACAACCCCTCCCTCAAGAGTCGAATCACCATATCACTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ...A......A.A.........G...GAG....A..........................G...........G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  W  Y  Y  S  D  N  S  G 
                    Query_8724   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGAATGGTATTATTCTGATAACAGTGGT  270
V  93.5% (229/245)  IGHV4-59*01  229  .............A.................................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (22/26)    IGHD3-22*01  1    --------------------------------------------------------------------......C.A.....GT......  22

                                      -------------->                                  
                                       Y  F  F  D  S  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_8724   271  TATTTCTTTGACTCCTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  319
D  84.6% (22/26)    IGHD3-22*01  23   ....---------------------------------------------  26
J  95.5% (42/44)    IGHJ4*02     5    -----........A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_251575

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            333     1e-93
IGHD1-1*01                                                                                            14.1    8.0  
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-1*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	CGACATGGC	TACAACT	T	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATCGACATGGCTACAACTTTGATGCTTTTGATATT	VKDRHGYNFDAFDI	232	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	10	1	0	90.9
CDR1-IMGT	19	42	24	24	0	0	100
FR2-IMGT	43	93	51	51	0	0	100
CDR2-IMGT	94	117	24	20	4	0	83.3
FR3-IMGT	118	231	114	111	3	0	97.4
CDR3-IMGT (germline)	232	240	9	7	2	0	77.8
Total	N/A	N/A	233	223	10	0	95.7


Alignments

                                     <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                        A  V  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  V  
                    Query_8725  8    GTGCAGTCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTGTTA  97
V  95.7% (223/233)  IGHV3-9*01  65   ......C...............................................................................A...  154
                                        A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  

                                     ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                     S  W  N  S  D  N  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  N  N  S  L  H  L  
                    Query_8725  98   GTTGGAACAGTGATAACATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAACAACTCCCTGCATCTGC  187
V  95.7% (223/233)  IGHV3-9*01  155  .......T....G..G.........................................................G.........T......  244
                                     S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                     -------------------------------------------><----------------CDR3-IMGT--------------->    
                                     Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  D  R  H  G  Y  N  F  D  A  F  D  I  W  
                    Query_8725  188  AAATGAACAGTCTGAGAGCTGAGGACACGGCCTTATATTACTGTGTGAAAGATCGACATGGCTACAACTTTGATGCTTTTGATATTTGGG  277
V  95.7% (223/233)  IGHV3-9*01  245  ..................................G..........CA......-------------------------------------  297
                                     Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                                      
D  100.0% (7/7)     IGHD1-1*01  3    --------------------------------------------------------------.......---------------------  9
J  96.0% (48/50)    IGHJ3*02    1    ----------------------------------------------------------------------...............C....  20

                                                                   
                                     G  Q  G  T  M  V  T  I  S  S  
                    Query_8725  278  GCCAAGGGACAATGGTCACCATCTCTTCAG  307
J  96.0% (48/50)    IGHJ3*02    21   ....................G.........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_325105

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           347     7e-98
IGHD6-19*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGG	AGCAGTGGCTGGTA	TGATAGG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGAGCAGTGGCTGGTATGATAGGTGACTAT	ARDGAVAGMIGDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8726   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGATATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  94.4% (236/250)  IGHV3-21*01  47   ..............................................C..........................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  G  V  S  N  D  Y  K  Y  Y  A  D  S  L  M  G  R  F  T  I  S  R  D  N  A  
                    Query_8726   91   AGTGGGTCTCATCCATTGGTGTTAGTAATGATTACAAATACTACGCAGATTCACTGATGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-21*01  137  .................A..AG.....G.AG.....T............C...G...A................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  G  A  V  A  G  M  
                    Query_8726   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGAGACGGAGCAGTGGCTGGTATGA  270
V  94.4% (236/250)  IGHV3-21*01  227  ............A.......................C.................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD6-19*01  7    -------------------------------------------------------------------------..............---  20

                                      ---------->                                  
                                      I  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8726   271  TAGGTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (40/41)    IGHJ4*02     8    ----......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_325102

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           304     1e-84
IGHD1-26*01                                                                                           14.1    8.6  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCTAGACCAAGAGTATGAA	TGGGAGGTTCTAC	CACA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCTAGACCAAGAGTATGAATGGGAGGTTCTACCACATGACTCC	ARSLDQEYEWEVLPHDS	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	221	27	0	89.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  V  S  G  F  T  F  R  T  Y  V  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8727   1    GGTCCCTGAGACTCTCCTGTGTAGTGTCTGGATTCACATTCAGAACCTATGTCATGAACTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  89.1% (221/248)  IGHV3-21*01  47   .....................C..CC...........C.....T.G....AG........................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  P  S  G  N  Y  V  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8727   91   AGTGGGTCTCATCCATTAGTCCTAGCGGAAATTATGTACACTATGTGGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  89.1% (221/248)  IGHV3-21*01  137  ....................AG...TA.T.G...CA..T....C.CA...........................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  K  S  L  Y  L  E  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  S  L  D  Q  E  Y  E  
                    Query_8727   181  AGAAGTCACTGTATCTGGAAATGGACAGCCTGAGAGTCGAGGACACGGCTGTTTATTATTGTGCGAGAAGCCTAGACCAAGAGTATGAAT  270
V  89.1% (221/248)  IGHV3-21*01  227  ....C............C.....A............C...............G.....C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.6% (11/13)    IGHD1-26*01  8    -----------------------------------------------------------------------------------------.  8

                                      GT-------------------->                                  
                                      W  E  V  L  P  H  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8727   271  GGGAGGTTCTACCACATGACTCCTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  327
D  84.6% (11/13)    IGHD1-26*01  9    .....C.A....---------------------------------------------  20
J  95.1% (39/41)    IGHJ4*02     8    ----------------.....A.....................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_325103

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            319     2e-89
IGHD6-13*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGGAGGGGGTGAG	AGCAGCTGG	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGGAGGGGGTGAGAGCAGCTGGTGACTTC	ARWEGVRAAGDF	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	104	10	0	91.2
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	225	21	0	91.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  R  G  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_8728   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATAAGAGGGAGTAACTGGTGGAGTTGGGTCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  91.5% (225/246)  IGHV4-4*02   49   ......................................C..CA.T.......................C.....................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  F  H  T  G  D  T  N  Y  N  P  S  L  K  S  R  L  T  L  S  V  D  N  S  N 
                    Query_8728   91   GAGTGGATCGGGGAAATCTTTCATACTGGAGACACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCTTATCAGTAGACAACTCCAAC  180
V  91.5% (225/246)  IGHV4-4*02   139  ........T..........A.....G...GAG...............................G.....A.............G.....G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  N  L  R  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  W  E  G  V  R  A  A  G 
                    Query_8728   181  AATCAGTTTTCCCTGAACCTGAGGTCTGTGTCCGCCGCGGACACGGCCGTCTATTACTGTGCGAGATGGGAGGGGGTGAGAGCAGCTGGT  270
V  91.5% (225/246)  IGHV4-4*02   229  ..C.....C........G.....C......A...................G...............------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD6-13*01  10   --------------------------------------------------------------------------------.........-  18
J  95.1% (39/41)    IGHJ4*02     8    -----------------------------------------------------------------------------------------.  8

                                      ----->                                  
                                       D  F  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_8728   271  GACTTCTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  310
J  95.1% (39/41)    IGHJ4*02     9    ....A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_325100

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           333     1e-93
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TCTGTCCCCG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGTCCCCGGACTAC	ARDLSPDY	241	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	126	24	22	2	0	91.7
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  M  F  S  D  Y  F  M  S  W  I  R  Q  A  P  G  K  G  L  E  
                    Query_8729   2    CCCTGTCCCTCACCTGCGCAGCCTCTGGATTCATGTTCAGTGACTACTTCATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  93.1% (230/247)  IGHV3-11*01  50   .....AGA...T....T................CC.............A.........................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  H  I  S  S  S  G  R  S  I  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  S  A  K  
                    Query_8729   92   GGGTTTCACACATTAGTAGTAGTGGTAGAAGCATATACTACGCAGACTCTGTGGAGGGCCGATTCACCATCTCCAGGGACAGCGCCAAGA  181
V  93.1% (230/247)  IGHV3-11*01  140  ........T...................T.C......................A...........................A........  229
                                      W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><-------CDR3-IMGT------>       
                                      N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  L  S  P  D  Y  W  G  
                    Query_8729   182  ACTCACTATTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCTTGTATTATTGTGCGAGAGATCTGTCCCCGGACTACTGGGGCC  271
V  93.1% (230/247)  IGHV3-11*01  230  .......G.A.....................................G.......C...........-----------------------  296
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
J  97.5% (39/40)    IGHJ4*02     9    -----------------------------------------------------------------------------.............  21

                                                                 
                                      Q  G  T  L  V  P  V  S  S  
                    Query_8729   272  AGGGAACCCTGGTCCCCGTCTCCTCAG  298
J  97.5% (39/40)    IGHJ4*02     22   ..............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_325101

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           329     3e-92
IGHD3-22*01                                                                                           21.8    0.041
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCGTAAAGGG	GGTTATTACTA	T	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCGTAAAGGGGGTTATTACTATCTACTGCTACTACAATATGGACGTC	ARTVKGVITIYCYYNMDV	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	226	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_8730   4    CCCTGAGACTCTCCTGCGCCGTCTATGGTGGGTCTTTCAGTGGTTACTACTGGACTTGGATCCGCCAACCCCCAGGGAAGGGGCTGGAGT  93
V  93.4% (226/242)  IGHV4-34*01  50   .....TCC...A.......T..............C...................GC...........G......................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  L  S  G  R  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N  
                    Query_8730   94   GGATTGGCGAAATCAATCTTAGTGGAAGAACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAATC  183
V  93.4% (226/242)  IGHV4-34*01  140  .......G..........A.........C..........................................G................C.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  I  Y  
                    Query_8730   184  AGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAACCGTAAAGGGGGTTATTACTATCTACT  273
V  93.4% (226/242)  IGHV4-34*01  230  ............A.................................G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (11/11)   IGHD3-22*01  20   -------------------------------------------------------------------------...........------  30
J  94.8% (55/58)    IGHJ6*02     5    -------------------------------------------------------------------------------------.....  9

                                      ------------------->                                 
                                      C  Y  Y  N  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8730   274  GCTACTACAATATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  94.8% (55/58)    IGHJ6*02     10   A.......GG...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_125802

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-16*02                                                                                           12.2    32   
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGT	TCGTTA	CCCAATCTTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTTCGTTACCCAATCTTGGCTACTACTACGGTATGGACGTC	ARDRSLPNLGYYYGMDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  M  G  L  E 
                    Query_8731   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGATGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...............................G.........T...........................C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  Y  S  G  T  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_8731   91   TGGATTGGGCATATCTATTACAGTGGGACCACCAGTTACAATCCTTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAT  180
V  93.5% (229/245)  IGHV4-59*01  139  .........T..................G.....AC.....C..C...........................G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  S  L  P  N  L  G  Y 
                    Query_8731   181  CAGTTCTCCCTGAAGCTGAATTCCGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATCGTTCGTTACCCAATCTTGGCTAC  270
V  93.5% (229/245)  IGHV4-59*01  229  ...................GC..T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*02  28   ---------------------------------------------------------------------......---------------  33
J  96.4% (53/55)    IGHJ6*02     8    --------------------------------------------------------------------------------------....  11

                                      ----------------->                                 
                                       Y  Y  G  M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_8731   271  TACTACGGTATGGACGTCTGGGGCCAAGGGGCCACCGTCACCGTCTCCTCA  321
J  96.4% (53/55)    IGHJ6*02     12   ..............................A....G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_251579

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTATTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  N  H  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8732   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTAATCACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (222/245)  IGHV4-59*01  49   .......................................AG..G.T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  S  H  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  T  A  D  K  S  K  N 
                    Query_8732   91   TGGATTGCCTATATCTCTCACAGTGGGGGCACCAATTACAACCGCTCCCTCAAGAGTCGAGTCACCATAACAGCGGACAAGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  .......GG.......A.T........A.......C.......C.........................T...TA....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_8732   181  CAGTTTTCCCTGAAGGTGAGATCTGTGACCGCCGCGGACACGGCCGTATATTATTGTGCCAGAGAGGCCTACTCTTATTACGGTATGGAC  270
V  90.6% (222/245)  IGHV4-59*01  229  .....C.........C....C...........T..............G.....C.....G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  91.4% (53/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC..C............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_8732   271  GTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  306
J  91.4% (53/58)    IGHJ6*02     27   ...........A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_342304

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           350     7e-99
IGHD2-8*01                                                                                            10.3    112  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	CTCACCGGA	GGTGT	T	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CTCACCGGAGGTGTT	LTGGV	249	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	109	5	0	95.6
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  T  S  G  F  N  F  G  D  F  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8733   1    GGTCCCTGAGACTCTCCTGTACAACTTCTGGATTCAATTTTGGTGATTTTGCTTTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-49*04  47   .......................G............CC..........A....A....................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  G  K  A  Y  G  W  T  T  E  Y  A  A  S  V  K  G  R  F  S  I  S  R  D  
                    Query_8733   91   AGTGGGTAGGTTTCATTAGAGGCAAAGCTTATGGTTGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCAGCATCTCTAGAGATG  180
V  95.2% (236/248)  IGHV3-49*04  137  ....................A..............G.......................................C......A.......  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--CDR3-IMGT-->       
                                      D  S  N  G  I  A  Y  L  Q  M  K  S  L  K  T  E  D  T  A  V  Y  Y  C  L  T  G  G  V  W  G  
                    Query_8733   181  ATTCCAACGGCATCGCCTATCTGCAAATGAAGAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTCTCACCGGAGGTGTTTGGGGCC  270
V  95.2% (236/248)  IGHV3-49*04  227  .......AA......................C....................................----------------------  294
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  100.0% (5/5)     IGHD2-8*01   17   -----------------------------------------------------------------------------.....--------  21
J  97.1% (33/34)    IGHJ4*02     15   -----------------------------------------------------------------------------------.......  21

                                                                 
                                      Q  G  T  L  V  S  V  S  S  
                    Query_8733   271  AGGGAACCCTGGTCAGCGTCTCCTCAG  297
J  97.1% (33/34)    IGHJ4*02     22   ...............C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_286705

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_8734   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.5% (278/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_8734   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_8734   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  .......C.....................................C...........G......A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  Y  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_8734   271  CATATATTACTATGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  ...G.......G.........---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_8734   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_286706

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            417     6e-119
IGHD6-6*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGTGAGGAACCAGCTCGTATCCGACTTC	ARAVRNQLVSDF	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	74	1	0	98.7
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	104	10	0	91.2
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	281	14	0	95.3


Alignments

                                     <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S 
                    Query_8735  2    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCAGC  91
V  95.3% (281/295)  IGHV1-8*01  1    .......................G................................................................C.  90
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                     GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                      S  Y  D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 
                    Query_8735  92   AGTTATGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTAT  181
V  95.3% (281/295)  IGHV1-8*01  91   .............A.........................................................C..................  180
                                      S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                     -----------------------------------------------FR3-IMGT-----------------------------------
                                      A  E  K  F  Q  G  R  V  T  M  T  G  D  T  S  I  T  T  A  Y  M  E  M  S  S  L  N  S  E  D 
                    Query_8735  182  GCAGAGAAGTTCCAGGGCAGAGTCACCATGACCGGGGACACTTCCATAACCACAGCCTACATGGAGATGAGCAGCCTAAACTCTGAAGAC  271
V  95.3% (281/295)  IGHV1-8*01  181  ...C.............................A..A....C.......G................C..........G.GA.....G...  270
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                     -----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  V  Y  Y  C  A  R  A  V  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8735  272  ACGGCCGTGTATTACTGTGCGAGAGCGGTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  95.3% (281/295)  IGHV1-8*01  271  .........................---------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    ------------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    ------------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_286707

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           265     5e-73
IGHD2-2*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GACGA	ATACTGTACTACTCCCGGCTGCT	TTAAGTACCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGACGAATACTGTACTACTCCCGGCTGCTTTAAGTACCCTTGACTCC	VKTNTVLLPAALSTLDS	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	125	24	13	8	3	54.2
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	244	5	4	1	0	80
Total	N/A	N/A	247	210	34	3	85


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  V  Y  V  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_8736   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCGTCTATGTCATGGCGTGGGTCCGCCAGGCTCCAGGGAGGGGCCTGG  90
V  85.0% (210/247)  IGHV3-23*01  47   ..........................................G.AG.....C....AGC......................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  T     G  N  G  A  A  A  Y  Y  A  D  S  V  K  G  R  F  N  I  S  R  D  N  S  
                    Query_8736   91   AGTGGGTCGCAGCGACT---GGAAATGGTGCAGCCGCATACTATGCCGACTCCGTGAAGGGCCGGTTCAACATCTCCAGGGACAATTCCG  177
V  85.0% (210/247)  IGHV3-23*01  137  ........T....T.T.AGT..T.G.....GTAG.A.......C..A......................C.........A.........A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      E  N  T  L  F  L  D  M  S  G  L  R  A  D  D  T  A  V  Y  Y  C  V  K  T  N  T  V  L  L  P  
                    Query_8736   178  AGAATACCCTTTTTCTGGATATGAGCGGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGTGAAGACGAATACTGTACTACTCCCGG  267
V  85.0% (210/247)  IGHV3-23*01  227  ....C..G..G.A....C.A....A.A.............G......................C...-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  78.3% (18/23)    IGHD2-2*01   4    ------------------------------------------------------------------------...T....G..G.A..A.  21

                                      GT-------------------->                                  
                                      A  A  L  S  T  L  D  S  W  G  Q  G  A  L  V  T  V  A  S  
                    Query_8736   268  CTGCTTTAAGTACCCTTGACTCCTGGGGCCAGGGAGCCCTGGTCACCGTCGCCTCAG  324
D  78.3% (18/23)    IGHD2-2*01   22   .....----------------------------------------------------  26
J  92.9% (39/42)    IGHJ4*02     7    ---------------......A.............A..............T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_286700

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           305     3e-85
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TCGGGA	TGGCTACAATT	TTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATCGGGATGGCTACAATTTTCTTGACTCC	ARDRDGYNFLDS	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	43	8	0	84.3
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	223	28	0	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  L  I  N  G  G  N  Y  W  S  W  I  R  Q  R  P  G  K  E 
                    Query_8737   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCCTCATCAATGGCGGTAACTACTGGAGTTGGATCCGCCAGCGCCCGGGGAAGGAG  90
V  88.8% (223/251)  IGHV4-31*03  49   ...............................G....A...G..G...T...T..........C.............A...A.......GC  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  T  Y  Y  S  G  K  T  Q  Y  N  P  S  L  K  G  R  L  T  I  S  P  D  T  S 
                    Query_8737   91   TTGGAGTGGATTGGCTATACCTATTACAGTGGGAAGACCCAGTACAACCCGTCCCTCAAGGGTCGACTCACCATATCACCTGACACGTCT  180
V  88.8% (223/251)  IGHV4-31*03  139  C.............G..C.T..............GC...T.C..................A.....G.T.........GTA.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  D  R  D  G  Y  N  F 
                    Query_8737   181  AAGAACCAGTTCTCCCTGAAGCTGAGTTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGATCGGGATGGCTACAATTTT  270
V  88.8% (223/251)  IGHV4-31*03  229  ..........................C...............................A.........A..-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD5-12*01  11   -----------------------------------------------------------------------------.......G...--  21

                                      -------->                                  
                                       L  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_8737   271  CTTGACTCCTGGGGCCAGGGGATCCTGGTCACCGTCTCCTCAG  313
J  92.9% (39/42)    IGHJ4*02     7    -......A............A.C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_286701

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            369     2e-104
IGHD3-3*01                                                                                            14.1    8.3   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	GGAGTGG	ACCATAGCGCCACCTGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGAGTGGACCATAGCGCCACCTGGCTTGACTAT	AREGVDHSATWLDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8738  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (243/250)  IGHV3-7*03  47   ..........................................................................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  L  A  K  I  K  Q  D  G  T  E  K  Y  Y  V  D  S  V  R  G  R  S  T  I  S  R  D  N  A  
                    Query_8738  91   AGTGGTTGGCCAAAATAAAGCAAGATGGAACTGAGAAATACTATGTGGACTCTGTGAGGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  97.2% (243/250)  IGHV3-7*03  137  .....G.......C................G..........................A........T.......................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  S  A  V  Y  Y  C  A  R  E  G  V  D  H  S  A  
                    Query_8738  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACTCGGCCGTGTATTATTGTGCGAGAGAAGGAGTGGACCATAGCGCCA  270
V  97.2% (243/250)  IGHV3-7*03  227  ............................................A.............C...........--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-3*01  15   -----------------------------------------------------------------------.......------------  21

                                     ------------->                                  
                                     T  W  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8738  271  CCTGGCTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.6% (41/42)    IGHJ4*02    7    ------.......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_286702

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD6-19*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	GTAGAGG	GCAGTGGCTGG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTAGAGGGCAGTGGCTGGAACTAC	ARVEGSGWNY	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  G  S  T  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_8739   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCGGCAGTACTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  95.2% (237/249)  IGHV4-39*01  49   ..................A....................A......G..........................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  I  D  T  S 
                    Query_8739   91   CTGGAGTGGATTGGGAGTATCTATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAAGAGTCGACTCACCATATCCATAGACACGTCC  180
V  95.2% (237/249)  IGHV4-39*01  139  ..........................T..............C........................G...........G...........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       E  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  V  E  G  S  G  W  N 
                    Query_8739   181  GAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTATCTATTACTGTGCCAGAGTAGAGGGCAGTGGCTGGAAC  270
V  95.2% (237/249)  IGHV4-39*01  229  A..................................................G.G...........G...---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD6-19*01  8    ----------------------------------------------------------------------------...........---  18
J  97.4% (38/39)    IGHJ4*02     10   ----------------------------------------------------------------------------------------..  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  I  S  S  
                    Query_8739   271  TACTGGGGCCAGGGAACCCTGGTCACCATCTCCTCAG  307
J  97.4% (38/39)    IGHJ4*02     12   ...........................G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_317828

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           280     1e-77
IGHD6-25*01                                                                                           18.0    0.59 
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTG	GCAGCGGCT	GCCACGAACTTCTATCACGACGAAC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCTGGCAGCGGCTGCCACGAACTTCTATCACGACGAACTGGACGTC	VRDLAAAATNFYHDELDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	13	8	0	61.9
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	212	33	0	86.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  P  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8740   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCCCTGGCTTCTACTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  86.5% (212/245)  IGHV4-59*01  49   .............................T.........AG.A.T.A...........................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  F  Y  Y  N  G  E  S  N  Y  N  P  S  L  K  S  R  V  S  I  S  L  D  M  S  K  S 
                    Query_8740   91   TGGATTGGCCACTTCTACTACAATGGCGAGTCCAACTACAATCCCTCCCTCAAGAGTCGAGTCTCCATTTCTCTGGACATGTCCAAGAGT  180
V  86.5% (212/245)  IGHV4-59*01  139  ........GT.TA....T....G...GAGCA..........C.....................A....A..AG.A....C........AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  F  T  S  V  T  A  A  D  T  A  V  Y  F  C  V  R  D  L  A  A  A  A  T  N  F 
                    Query_8740   181  CAGTTCTCCCTGAAGTTCACTTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGTGAGAGATCTGGCAGCGGCTGCCACGAACTTC  270
V  86.5% (212/245)  IGHV4-59*01  229  ...............C.G.GC...............................A.....C......-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-25*01  8    ---------------------------------------------------------------------.........------------  16

                                      -------------------->                                 
                                       Y  H  D  E  L  D  V  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_8740   271  TATCACGACGAACTGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTCA  324
J  97.6% (40/41)    IGHJ6*02     22   -------------........................C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_241152

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           371     7e-105
IGHD1-26*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GTTCCGTAGG	AGTGGGAGCTACTAC	ACTTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGTTCCGTAGGAGTGGGAGCTACTACACTTTGGTACTTTGACTAC	AKGSVGVGATTLWYFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	243	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  M  G  L  
                    Query_8741   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGATGGGGCTGG  90
V  97.6% (243/249)  IGHV3-23*01  47   .................................................................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  R  S  T  Y  Y  A  D  S  V  K  G  R  F  T  F  S  R  D  N  S  
                    Query_8741   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTCGCAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCTTCTCCAGAGACAATTCCA  180
V  97.6% (243/249)  IGHV3-23*01  137  .............................G.T.......................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  A  Y  Y  C  A  K  G  S  V  G  V  G  A  
                    Query_8741   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGCGTATTACTGTGCGAAAGGTTCCGTAGGAGTGGGAGCTA  270
V  97.6% (243/249)  IGHV3-23*01  227  ...................................................TA................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD1-26*01  6    -------------------------------------------------------------------------------...........  16

                                      GT-------------------->                                  
                                      T  T  L  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8741   271  CTACACTTTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (15/15)   IGHD1-26*01  17   ....-----------------------------------------------------  20
J  100.0% (46/46)   IGHJ4*02     3    -----------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_316225

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD1-1*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GGGAGGGGG	CAACTGG	GAACCCTTTAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTAC	ARGGGNWEPFTY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	288	267	21	0	92.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  Y
                    Query_8742   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCTA  90
V  92.7% (267/288)  IGHV5-51*01  6    .................................................................G............C......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  L  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  I  V  F  P  D  D  S  D  T  R  Y  S  P
                    Query_8742   91   CTGGCTCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGATCGTTTTTCCTGATGACTCTGATACCAGATACAGCCC  180
V  92.7% (267/288)  IGHV5-51*01  96   ....A.............C..G.........A..........G............A.C.A.....G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  I  T  I  S  A  D  K  S  I  T  T  A  F  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_8742   181  GTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCACCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACACCGC  270
V  92.7% (267/288)  IGHV5-51*01  186  .......C.......GG...........................G........A...........G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  G  N  W  E  P  F  T  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8742   271  CATCTATTACTGTGCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.7% (267/288)  IGHV5-51*01  276  ...G...........G..-----------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------.......-------------------------------------------------  11
J  100.0% (38/38)   IGHJ4*02     11   ---------------------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_289883

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           325     3e-91
IGHD6-13*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TCCAGGGAGGTGGG	GCACCAGCTGGT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATCCAGGGAGGTGGGGCACCAGCTGGTACTACTTTGACTAC	AKDPGRWGTSWYYFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  T  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8743   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCACTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGG  90
V  91.6% (229/250)  IGHV3-30*18  47   .............................................G.TA....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  E  I  S  Y  D  G  M  N  T  Y  Y  P  D  S  V  K  G  R  F  T  I  S  R  D  K  V  
                    Query_8743   91   AGTGGGTGGCAGAGATATCATATGATGGAATGAATACATACTATCCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAAGGTCA  180
V  91.6% (229/250)  IGHV3-30*18  137  ............TT................GT....A.......G.......C................................TTC..  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  I  L  Y  L  Q  M  I  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  P  G  R  W  G  T  
                    Query_8743   181  AGAACATTCTGTATCTGCAAATGATCAGCCTGAGACCTGAGGACACGGCTGTCTATTATTGTGCGAAGGATCCAGGGAGGTGGGGCACCA  270
V  91.6% (229/250)  IGHV3-30*18  227  ......CG................A..........G................G.....C........A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  91.7% (11/12)    IGHD6-13*01  8    ------------------------------------------------------------------------------------...G..  13

                                      T------------------>                                  
                                      S  W  Y  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_8743   271  GCTGGTACTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  324
D  91.7% (11/12)    IGHD6-13*01  14   ......------------------------------------------------  19
J  97.9% (47/48)    IGHJ4*02     1    ------.....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_289880

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     4e-93
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_8744   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  S  L  K  P  R  V  T  I  S  L  D  T  S  K  N 
                    Query_8744   91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCTCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-59*08  139  ...A....G......T.......T..............................AG............A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G 
                    Query_8744   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGT  270
V  93.4% (228/244)  IGHV4-59*08  229  .............A......C..........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_8744   271  TATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  334
J  94.2% (49/52)    IGHJ1*01     1    ------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_56482

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           321     8e-90
IGHD4-17*01                                                                                           16.1    2.6  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACTATGGGGGGTTTTCATAACGC	CGGTGACT	TCCAGTTTCAGAGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACTATGGGGGGTTTTCATAACGCCGGTGACTTCCAGTTTCAGAGTTTTGACTCC	ARTMGGFHNAGDFQFQSFDS	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	93	21	0	81.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	247	42	0	85.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  I  S  C  K  T  S  G  D  S  F  N  T  R
                    Query_8745   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGATCTCCTGCAAAACTTCTGGAGACAGCTTCAACACCCG  90
V  85.5% (247/289)  IGHV1-69*06  6    ..................G.................................G..........GG.........G..C.....G..G.TA  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  L  S  W  V  R  Q  A  P  R  R  G  L  E  W  L  G  G  L  I  P  I  F  N  T  P  K  Y  S  Q
                    Query_8745   91   TGGTCTCAGCTGGGTGCGACAGGCCCCTAGACGGGGACTTGAGTGGCTGGGAGGGCTCATCCCTATCTTTAATACACCAAAGTACTCACA  180
V  85.5% (247/289)  IGHV1-69*06  96   ..C.A.......................G...AA..G.........A........A..............GG....G....C...G....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  N  V  L  F  M  N  L  T  S  L  R  S  E  D  T  A
                    Query_8745   181  GAAGTTCCAGGGCAGAGTCACTATCACCGCGGACAAATCCACGAATGTTCTCTTCATGAACCTTACCAGCCTGAGGTCTGAGGACACTGC  270
V  85.5% (247/289)  IGHV1-69*06  186  .....................G..T...................GCACAGC..A....G.G..G.G.........A...........G..  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        L  Y  Y  C  A  R  T  M  G  G  F  H  N  A  G  D  F  Q  F  Q  S  F  D  S  W  G  Q  G  T  L
                    Query_8745   271  CCTCTATTATTGTGCGAGAACTATGGGGGGTTTTCATAACGCCGGTGACTTCCAGTTTCAGAGTTTTGACTCCTGGGGCCAGGGAACCCT  360
V  85.5% (247/289)  IGHV1-69*06  276  .G.G.....C.........-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD4-17*01  7    ------------------------------------------........----------------------------------------  14
J  97.7% (42/43)    IGHJ4*02     6    ----------------------------------------------------------------.......A..................  31

                                                       
                                        V  T  V  S  S  
                    Query_8745   361  GGTCACCGTCTCCTCAG  377
J  97.7% (42/43)    IGHJ4*02     32   .................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_316221

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           279     3e-77
IGHD3-16*01                                                                                           18.0    0.60 
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACAACG	TATGCTTAT	GTCAGTGCTTGGGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAACGTATGCTTATGTCAGTGCTTGGGGATGATGCTTTTGATGTC	ARRQRMLMSVLGDDAFDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	96	18	0	84.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	214	36	0	85.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  T  F  S  H  F  W  G  W  L  R  Q  S  P  G  K  G 
                    Query_8746   1    ACCCTGTCCCTCACCTGCACTGTCTCCGGTGGCTCCATCAACACTTTTAGTCACTTTTGGGGCTGGCTCCGCCAGTCCCCAGGGAAGGGG  90
V  85.6% (214/250)  IGHV4-39*01  49   ..........................T.............G..G.AG....T...AC.........A........C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Q  M  F  Y  G  G  S  T  Y  Q  N  P  S  L  N  S  R  V  T  V  S  V  D  P  S 
                    Query_8746   91   CTGGAGTGGATTGGGCAGATGTTCTATGGTGGGAGCACGTACCAGAACCCGTCGCTGAATAGTCGAGTCACCGTGTCCGTTGACCCGTCC  180
V  85.6% (214/250)  IGHV4-39*01  139  ...............AGT..C.AT...A..........C...T.C........C..C..G............A.A.....A...A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  S  Q  F  F  L  N  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  R  Q  R  M  L  M  S 
                    Query_8746   181  AAGAGTCAGTTCTTCCTGAACCTAACCTCTGTGACCGCCGCAGACTCGGCTGTATATTATTGTGCGAGACGACAACGTATGCTTATGTCA  270
V  85.6% (214/250)  IGHV4-39*01  229  ....AC.......C......G..G.G...................A.......G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  26   -----------------------------------------------------------------------------.........----  34

                                      -IMGT--------------------->                                  
                                       V  L  G  D  D  A  F  D  V  W  G  Q  G  T  G  V  T  V  S  S  
                    Query_8746   271  GTGCTTGGGGATGATGCTTTTGATGTCTGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  331
J  96.0% (48/50)    IGHJ3*01     1    -----------...............................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_209528

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           369     2e-104
IGHD3-22*01                                                                                           16.1    2.5   
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCGTGGGGG	CTAAGATAGAAGTG	ACTGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGTGGGGGCTAAGATAGAAGTGACTGATGATGGCTTTGATATC	AGVGAKIEVTDDGFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	261	25	0	91.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  S  E  L  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  R  F  Y  G  H
                    Query_8747   1    GCAGCTGGTGCAGTCTGGATCAGAACTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGGTCTGGATACAGGTTTTACGGCCA  90
V  91.3% (261/286)  IGHV5-51*03  6    ...................G....GG........................A...............T...........C...AC.A..T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  T  I  Y  P  A  D  S  D  T  K  Y  S  P
                    Query_8747   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGACCATCTATCCTGCTGACTCTGATACCAAATACAGCCC  180
V  91.3% (261/286)  IGHV5-51*03  96   .....................................................T...........G..............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  D  G  H  I  T  I  S  A  D  K  S  I  S  T  A  Y  L  H  W  S  S  L  R  A  S  D  T  A
                    Query_8747   181  GTCCTTTGATGGCCACATCACCATCTCAGCCGACAAGTCCATCAGTACCGCTTACCTACACTGGAGCAGCCTGAGGGCCTCGGACACCGC  270
V  91.3% (261/286)  IGHV5-51*03  186  ......CC.A.....GG............................C.....C.....G..G.............A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        T  Y  Y  C  A  G  V  G  A  K  I  E  V  T  D  D  G  F  D  I  W  G  Q  G  T  M  A  T  V  S
                    Query_8747   271  CACATATTACTGTGCGGGCGTGGGGGCTAAGATAGAAGTGACTGATGATGGCTTTGATATCTGGGGCCAAGGGACAATGGCCACCGTCTC  360
V  91.3% (261/286)  IGHV5-51*03  276  ..TG............--------------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                           
D  85.7% (12/14)    IGHD3-22*01  7    --------------------------...T.....T....--------------------------------------------------  20
J  94.0% (47/50)    IGHJ3*02     1    ---------------------------------------------.....CT............................T.........  45

                                           
                                        S  
                    Query_8747   361  TTCAG  365
J  94.0% (47/50)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_316223

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           336     1e-94
IGHD3-16*01                                                                                           14.1    7.8  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCC	GTATTAT	CGC	ATCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCCCGTATTATCGCATC	TRGPYYRI	240	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	50	1	0	98
CDR2-IMGT	102	125	24	23	1	0	95.8
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	231	223	8	0	96.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  
                    Query_8748   16   GTGCAGCCTCTGGATTCACCTTCAGTAACTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAATGGGTTTCATACATTA  105
V  96.5% (223/231)  IGHV3-48*03  65   ...........................GT............................................G................  154
                                         A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  S  G  S  P  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_8748   106  GTAGTAGTGGTAGTCCCATATATTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGC  195
V  96.5% (223/231)  IGHV3-48*03  155  ..............A.......C...................................................................  244
                                      S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-------CDR3-IMGT------>                      
                                      Q  T  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  G  P  Y  Y  R  I  W  G  Q  G  T  M  V  
                    Query_8748   196  AAACTAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTACGAGAGGCCCGTATTATCGCATCTGGGGCCAAGGGACAATGGTCA  285
V  96.5% (223/231)  IGHV3-48*03  245  ...TG.......................................G......---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (7/7)     IGHD3-16*01  1    -------------------------------------------------------.......----------------------------  7
J  100.0% (36/36)   IGHJ3*02     14   -----------------------------------------------------------------.........................  38

                                                 
                                      T  V  S  S 
                    Query_8748   286  CCGTCTCTTCA  296
J  100.0% (36/36)   IGHJ3*02     39   ...........  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_316222

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           344     6e-97
IGHD2-21*01                                                                                           10.3    122  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TGTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTGTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFVQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  I  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  N 
                    Query_8749   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCATCATCAGGAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGAAC  90
V  94.4% (234/248)  IGHV4-31*03  49   ...............................G.TC......C....................C........................GG.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8749   91   CTGGAGTGGATTGGGTACATCTATTATAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCT  180
V  94.4% (234/248)  IGHV4-31*03  139  ..........................C.......G.............C......................C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  V  Q  E 
                    Query_8749   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGGTCTTCTCTATTTGTCCAAGAA  270
V  94.4% (234/248)  IGHV4-31*03  229  ..........................C.............................T...........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD2-21*01  22   ---------------------------------------------------------------------------.....----------  26

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8749   271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_209524

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           288     5e-80
IGHD2-8*02                                                                                            19.9    0.16 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGATGCGGCGGAGCGAAATCA	GTACTGGTGG	GG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATGCGGCGGAGCGAAATCAGTACTGGTGGGGACTACTTTGACCGC	ARMRRSEISTGGDYFDR	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  V  P  Y  L  W  S  W  V  R  Q  H  P  V  K  G 
                    Query_8750   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATAAGAAGTGTTCCTTACCTCTGGAGCTGGGTCCGCCAGCACCCAGTGAAGGGC  90
V  87.4% (215/246)  IGHV4-31*03  49   ......................................C..C....G.GG....TA..........A...............G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  Y  M  Y  Y  S  G  S  N  R  Y  N  P  S  L  K  S  R  V  S  M  S  L  D  T  S 
                    Query_8750   91   CTGGAGTGGATTGCATACATGTACTACAGTGGGAGTAATCGCTACAACCCGTCCCTCAAGAGTCGAGTTTCCATGTCGCTAGACACGTCT  180
V  87.4% (215/246)  IGHV4-31*03  139  .............GG.....C..T...........C.CCTA............................A....A..AG...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       R  N  Q  F  S  L  R  L  T  S  M  T  A  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  I  S 
                    Query_8750   181  AGGAACCAGTTCTCCCTAAGGCTGACCTCTATGACGGCCGCGGACACGGCCATCTACTACTGTGCGCGGATGCGGCGGAGCGAAATCAGT  270
V  87.4% (215/246)  IGHV4-31*03  229  .A...............G.A.....G....G....T...............G.G..T.........------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (10/10)   IGHD2-8*02   9    ----------------------------------------------------------------------------------------..  10

                                      MGT-------------------->                                  
                                       T  G  G  D  Y  F  D  R  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_8750   271  ACTGGTGGGGACTACTTTGACCGCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  328
D  100.0% (10/10)   IGHD2-8*02   11   ........--------------------------------------------------  18
J  91.7% (44/48)    IGHJ4*02     1    ----------...........TA.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_289888

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           397     7e-113
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ2*01                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	TACTATAATCCTAGTGGTTATTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACTATAATCCTAGTGGTTATTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGYYGYWYFDL	261	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	24	0	0	100
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	21	0	0	100
FR3-IMGT	147	260	114	110	4	0	96.5
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	261	7	0	97.4


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  V  R  
                    Query_8751   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGGTCCGGC  90
V  97.4% (261/268)  IGHV4-59*01  26   ................T..................................................................A......  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_8751   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  97.4% (261/268)  IGHV4-59*01  116  ...............................G..........................................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  I  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  
                    Query_8751   181  TATCAGTAGATATCTCCAAGAACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACT  270
V  97.4% (261/268)  IGHV4-59*01  206  ..........C.CG............................G.............................................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     
D  87.5% (21/24)    IGHD3-22*01  5    -----------------------------------------------------------------------------------------.  5

                                      -------------CDR3-IMGT--------------------->                                  
                                      Y  Y  N  P  S  G  Y  Y  G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8751   271  ACTATAATCCTAGTGGTTATTACGGGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  348
D  87.5% (21/24)    IGHD3-22*01  6    .....G..AG.............-------------------------------------------------------  28
J  100.0% (52/52)   IGHJ2*01     2    --------------------------....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_289889

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     3e-98
IGHD5-12*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CATCC	GTGGATATGGTG	CTCCTGGGACGCAAGTTGT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACATCCGTGGATATGGTGCTCCTGGGACGCAAGTTGTCTACGGAATGGACGTC	ARDIRGYGAPGTQVVYGMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  A  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8752   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCACTAGTGCTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   .............................T..........GC....G...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  Q  S  R  I  T  I  S  Q  D  K  S 
                    Query_8752   91   CTGGAGTGGATTGGATACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCCAGAGTCGAATTACCATATCACAAGACAAGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ..............G..........................................A........G...........GT.....C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  I  R  G  Y  G  A 
                    Query_8752   181  AAGAACCAGTTCTCCCTGAACCTGAGCTCTGTGACGGCCGCGGACACGGCCGTATATTACTGTGCGAGGGACATCCGTGGATATGGTGCT  270
V  94.4% (237/251)  IGHV4-31*03  229  ....................G..............T.................G..............A..-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD5-12*01  1    ----------------------------------------------------------------------------........A...--  12

                                      DR3-IMGT------------------------>                                 
                                       P  G  T  Q  V  V  Y  G  M  D  V  W  G  H  G  T  R  V  T  V  S  S 
                    Query_8752   271  CCTGGGACGCAAGTTGTCTACGGAATGGACGTCTGGGGCCACGGGACCAGGGTCACCGTCTCCTCA  336
J  93.9% (46/49)    IGHJ6*02     14   -----------------......T.................A.......C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_316229

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD1-26*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGG	GTGGGAGCTAC	GAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGTGGGAGCTACGAAACTTTGACTAC	ARGGWELRNFDY	292	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	73	1	0	98.6
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	111	3	0	97.4
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	284	9	0	96.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  
                    Query_8753   5    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCA  94
V  96.9% (284/293)  IGHV5-51*03  2    ....G............................................................................G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  M  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  A  G  D  S  D  T  R  Y  
                    Query_8753   95   GCTACTGGATCGGCTGGATGCGCCAGATGCCCGGGAAAGGCCTCGAGTGGATGGGGATCATCTATGCGGGTGACTCTGATACCAGATACA  184
V  96.9% (284/293)  IGHV5-51*03  92   .................G.........................G.....................C.T......................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_8753   185  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACT  274
V  96.9% (284/293)  IGHV5-51*03  182  ................................................G........A...............................A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      S  A  M  Y  Y  C  A  R  G  G  W  E  L  R  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8753   275  CCGCCATGTATTACTGTGCGAGAGGGGGGTGGGAGCTACGAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  361
V  96.9% (284/293)  IGHV5-51*03  272  .......................----------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                 
D  100.0% (11/11)   IGHD1-26*01  7    ----------------------------...........------------------------------------------------  17
J  100.0% (45/45)   IGHJ4*02     4    ------------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_316228

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           324     8e-91
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GTCGAGGGAG	TGACTACGGT	AGACT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGTCGAGGGAGTGACTACGGTAGACTCTACTTTGACTAC	ARGRGSDYGRLYFDY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	101	51	44	4	3	86.3
CDR2-IMGT	102	125	24	19	5	0	79.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	5	2	0	71.4
Total	N/A	N/A	249	230	16	3	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  I  S  W  V  R  R  A  P  G  K  G  L  
                    Query_8754   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATGCCATCAGCTGGGTCCGCCGGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-23*01  47   ...........................................C.G.........G.............A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S     M  I  G  G  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8754   91   AATGGATCTCA---ATGATTGGTGGTGGTGGAACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  177
V  92.4% (230/249)  IGHV3-23*01  137  .G...G.....GCT..T.G....A.......T.G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  G  R  G  S  D  Y  G  
                    Query_8754   178  AGAACACCCTGTATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCCAGAGGTCGAGGGAGTGACTACGGTA  267
V  92.4% (230/249)  IGHV3-23*01  227  .......G...............A..........................G.............G.A..---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD4-17*01  1    -------------------------------------------------------------------------------..........-  10

                                      ---------------->                                  
                                      R  L  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8754   268  GACTCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (47/47)   IGHJ4*02     2    ----...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_209523

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           304     1e-84
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTGCCTTCGGTCCGA	ATAGCAGT	TGACAGGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGCCTTCGGTCCGAATAGCAGTTGACAGGGGCTACTCCGGCATGGACGTC	ARLPSVRIAVDRGYSGMDV	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	218	24	0	90.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  L  N  S  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_8755   4    CCCTGAGACTCTCCTGTACTGTCTCTGGCGACTCCTTGAATAGTTACTTCTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  90.1% (218/242)  IGHV4-59*01  50   .....TCC...A....C...........T.G....A.C.G........A.....G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  D  S  E  T  T  K  Y  N  P  S  L  R  S  R  V  T  I  S  A  D  T  S  K  N  
                    Query_8755   94   GGATTGGCTATATCTATGACAGTGAGACCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAACC  183
V  90.1% (218/242)  IGHV4-59*01  140  .......G.........T......G..G......C................A....................T.................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      Q  F  S  L  T  V  T  S  V  T  P  A  D  T  A  V  Y  F  C  A  R  L  P  S  V  R  I  A  V  D  
                    Query_8755   184  AGTTCTCCCTGACGGTGACCTCTGTGACCCCTGCGGACACGGCCGTGTATTTCTGTGCGAGATTGCCTTCGGTCCGAATAGCAGTTGACA  273
V  90.1% (218/242)  IGHV4-59*01  230  ............A.C...G..........G.....................A..........----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD6-19*01  5    -----------------------------------------------------------------------------........-----  12

                                      ---------------------->                                 
                                      R  G  Y  S  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8755   274  GGGGCTACTCCGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  96.2% (50/52)    IGHJ6*02     11   ----.....A...T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_200760

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              58.4    8e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	ACAGCTGTGG	CTAGGCA	GCCAG	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  S  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  E  G  L  
                    Query_8756   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCAGCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGGAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   ........................C...........C...........................................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  N  P  S  G  K  N  I  Y  N  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8756   91   AGTGGGTCTCAGCTATTAATCCTAGTGGTAAAAACATATACAACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-23*01  137  ..................G.GG.......GGT.G..C....T................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT---------------------------------------------------->                            
                                      K  K  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  E  Q  L  W  L  G  S  
                    Query_8756   181  AGAAGACACTGTATCTACAAATGAACAGCCTAAGAGCCGAGGACACGGCCGTATACTACTGTGCCAAAGAACAGCTGTGGCTAGGCAGCC  270
V  92.8% (232/250)  IGHV3-23*01  227  ....C..G........G..............G.......................T........G.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (9/10)     IGHD5-18*01  7    ----------------------------------------------------------------------......A...----------  16
J  100.0% (30/30)   IGHJ4*02     19   ---------------------------------------------------------------------------------------...  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_8756   271  AGGGAACCCTGGTCACCGTCTCCTCAG  297
J  100.0% (30/30)   IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_311235

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            324     8e-91
IGHD3-3*01                                                                                            14.1    9.3  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GGCG	TGGAGTG	CTCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGGGCGTGGAGTGCTCGCAACTGGCTGGACCCC	GRAWSARNWLDP	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	16	8	0	66.7
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	95	19	0	83.3
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	287	247	40	0	86.1


Alignments

                                     <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                      Q  L  V  Q  S  G  A  E  V  K  M  P  G  A  S  V  K  L  S  C  K  A  S  G  Y  I  F  H  T  Y 
                    Query_8757  2    CAGCTGGTGCAGTCTGGGGCTGAGGTGAAGATGCCTGGTGCCTCAGTGAAGCTTTCCTGCAAGGCTTCTGGGTACATCTTCCATACATAT  91
V  86.1% (247/287)  IGHV1-3*01  7    .....T.........................A......G............G...................A....C....AC..GC...  96
                                      Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                     --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                      G  I  H  W  V  R  Q  G  P  R  Q  R  L  Q  W  M  G  W  I  S  A  G  T  G  N  T  Q  Y  S  E 
                    Query_8757  92   GGCATCCACTGGGTGCGCCAGGGCCCCAGACAACGGCTTCAGTGGATGGGATGGATCAGCGCTGGCACTGGTAACACACAATATTCAGAG  181
V  86.1% (247/287)  IGHV1-3*01  97   .CT..G..T.............C....G.....A.....G..................A........A..........A........C..  186
                                      A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                     -----------------------------------------FR3-IMGT-----------------------------------------
                                      D  F  Q  D  R  L  T  I  T  R  D  T  S  A  D  T  A  F  M  E  L  R  S  L  T  S  E  D  T  G 
                    Query_8757  182  GACTTCCAAGACAGACTCACCATCACCAGAGACACATCCGCGGACACTGCCTTCATGGAACTGCGCAGCCTGACATCTGAAGACACGGGT  271
V  86.1% (247/287)  IGHV1-3*01  187  A.G.....G.G....G.......T.....G............AG...A....A......G...A.........G..............C.  276
                                      K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                     -----------><-------------CDR3-IMGT------------>                                  
                                      V  Y  F  C  G  R  A  W  S  A  R  N  W  L  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_8757  272  GTTTATTTCTGTGGGAGGGCGTGGAGTGCTCGCAACTGGCTGGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  353
V  86.1% (247/287)  IGHV1-3*01  277  ..G....A.....C...-----------------------------------------------------------------  293
                                      V  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD3-3*01  14   ---------------------.......------------------------------------------------------  20
J  94.0% (47/50)    IGHJ5*02    2    --------------------------------.......T.C............................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_202608

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            341     5e-96
IGHD3-16*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TTGGCCCCGGATTCAGATATATGGGG	TTGGGGGAG	N/A	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATATTGGCCCCGGATTCAGATATATGGGGTTGGGGGAGTAC	ARDIGPGFRYMGLGEY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	252	10	9	1	0	90
Total	N/A	N/A	252	235	17	0	93.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  D  Y  A  M  H  W  F  R  Q  V  P  G  K  G  L  
                    Query_8758   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGAAGATTATGCCATGCATTGGTTCCGGCAAGTTCCAGGGAAGGGCCTGG  90
V  93.3% (235/252)  IGHV3-9*01   47   ...........................................T..............C...G.........C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  S  S  T  K  I  G  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8758   91   AGTGGGTCTCAGGTATTAATTGGAGTAGTACTAAAATAGGCTATGCGGACGCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.3% (235/252)  IGHV3-9*01   137  ..................G.....A....GG..GC...............T.......................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  K  S  L  Y  V  Q  M  N  N  L  R  P  E  D  T  A  L  Y  Y  C  A  R  D  I  G  P  G  F  R  
                    Query_8758   181  AGAAGTCCCTGTATGTACAAATGAACAATCTGAGACCTGAGGACACGGCCTTGTATTACTGTGCAAGAGATATTGGCCCCGGATTCAGAT  270
V  93.3% (235/252)  IGHV3-9*01   227  ....C.........C.G..........G.......G..............................A.....------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                      T------------------>                                  
                                      Y  M  G  L  G  E  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_8758   271  ATATGGGGTTGGGGGAGTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  324
D  100.0% (9/9)     IGHD3-16*01  16   --------.........-------------------------------------  24
J  97.3% (36/37)    IGHJ4*02     12   -----------------................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_311234

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD2-2*02                                                                                            18.0    0.64 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCAAGCAGTCGGGATTGTCGAAGTAATGC	CTGCTATAC	GGAATCAGATCTTTACCTCAAT	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCAAGCAGTCGGGATTGTCGAAGTAATGCCTGCTATACGGAATCAGATCTTTACCTCAATTACGATATGGGCGTC	ASSSRDCRSNACYTESDLYLNYDMGV	238	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	227	13	0	94.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  T  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  K 
                    Query_8759   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGGACTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGAAG  90
V  94.6% (227/240)  IGHV4-59*01  49   ...............................G.........T.G.........................C.................G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_8759   91   TGGATTGGGTATATCTATTACAGTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGGCAGACACGTCCAAGAAC  180
V  94.6% (227/240)  IGHV4-59*01  139  ............................G..........................................A.T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       H  F  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  S  S  R  D  C  R  S  N  A 
                    Query_8759   181  CACTTCTCCCTGAAGGTGACCTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGCGTCAAGCAGTCGGGATTGTCGAAGTAATGCC  270
V  94.6% (227/240)  IGHV4-59*01  229  ..G............C...G...........................G..T.........------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD2-2*02   22   -----------------------------------------------------------------------------------------.  22

                                      --CDR3-IMGT--------------------------------->                                 
                                       C  Y  T  E  S  D  L  Y  L  N  Y  D  M  G  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_8759   271  TGCTATACGGAATCAGATCTTTACCTCAATTACGATATGGGCGTCTGGGGCCAAGGGACCACGGTCTCCGTCTCCTCA  348
D  100.0% (9/9)     IGHD2-2*02   23   ........----------------------------------------------------------------------  30
J  93.8% (45/48)    IGHJ6*02     15   ------------------------------....G.....A.........................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_202601

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           283     1e-78
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	230	262	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	20	4	0	83.3
FR3-IMGT	116	229	114	105	9	0	92.1
Total	N/A	N/A	217	199	18	0	91.7


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  R  V  A  V  I  W  Y  N
                    Query_8760   13   GTCTGGATTCACCTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGGAGCGGGTGGCAGTTATCTGGTATAA  102
V  91.7% (199/217)  IGHV3-33*03  72   ...............C.....C.....C................................G......T.............A......G.  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  I  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  F  L  Q  M  N
                    Query_8760   103  TGGAATTAACAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCAAGAACACCCTGTTTCTGCAGATGAA  192
V  91.7% (199/217)  IGHV3-33*03  162  .....G...T................................................A.............G....A......A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------CDR3-IMGT----------->                    
                                        S  L  R  A  D  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  D  P  W  G  Q  G  T  L  V
                    Query_8760   193  CAGCCTGAGAGCCGACGACACCGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCGACCCCTGGGGCCAGGGTACCCTGGT  282
V  91.7% (199/217)  IGHV3-33*03  252  ...............G.....G...G.G.....C...-----------------------------------------------------  288
                                        S  L  R  A  E  D  T  A  V  Y  Y  C                                                      
D  90.9% (10/11)    IGHD6-13*01  7    ------------------------------------------....G......-------------------------------------  17
J  97.8% (45/46)    IGHJ5*02     6    ----------------------------------------------------------.......................A........  37

                                                    
                                        T  V  S  S  
                    Query_8760   283  CACCGTCTCCTCAG  296
J  97.8% (45/46)    IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_233374

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	272	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_8761   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  95.1% (272/286)  IGHV5-51*01  6    ..................................................A...............T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_8761   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCTTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGACACCAGATACAGTCC  180
V  95.1% (272/286)  IGHV5-51*01  96   ......................A.......G......C......G..............................T...........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  N  T  A  Y  L  Q  W  S  T  L  K  A  S  D  P  A
                    Query_8761   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACCCCGC  270
V  95.1% (272/286)  IGHV5-51*01  186  ....................C...................A...G.......................G................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        M  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  P  G  T  L  V  P  V  S  S 
                    Query_8761   271  CATGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCCGGGAACCCTGGTCCCCGTCTCCTCA  352
V  95.1% (272/286)  IGHV5-51*01  276  ................------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                   
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....----------------------------------------------------  12
J  95.0% (38/40)    IGHJ4*02     8    ------------------------------------------..............A.............A...........  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_202603

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD6-19*01                                                                                           14.1    8.5  
IGHJ5*02                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AACGTT	CAGTGGC	CATTAGAGGGCGT	CAACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAACGTTCAGTGGCCATTAGAGGGCGTCAACGGGTTTGACCAC	AKNVQWPLEGVNGFDH	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  A  Y  A  M  S  W  V  R  Q  A  P  G  M  G  L  
                    Query_8762   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTTAGTGCCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGATGGGGCTGG  90
V  94.4% (234/248)  IGHV3-23*01  47   ...................................A.......CAG............C......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  Y  G  D  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8762   91   AGTGGGTCTCAGCTATTAGTGGTTATGGTGATAAAACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (234/248)  IGHV3-23*01  137  .......................AG.....G..GC.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  N  V  Q  W  P  L  E  
                    Query_8762   181  AGAGCACGCTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAAACGTTCAGTGGCCATTAGAGG  270
V  94.4% (234/248)  IGHV3-23*01  227  ...A........A......A................................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD6-19*01  9    --------------------------------------------------------------------------.......---------  15

                                      T------------------>                                  
                                      G  V  N  G  F  D  H  W  G  R  G  S  L  V  T  A  S  S  
                    Query_8762   271  GCGTCAACGGGTTTGACCACTGGGGCCGGGGAAGCCTGGTTACCGCCTCCTCAG  324
J  86.0% (43/50)    IGHJ5*02     2    ----....T....C....C........A.....C......C....T........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_202602

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           341     5e-96
IGHD3-3*01                                                                                            39.1    3e-07
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GA	ATTACGATTTTTGGAGGGGTTAT	AATTCTAATCT	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAATTACGATTTTTGGAGGGGTTATAATTCTAATCTCGGTATGGACGTC	ARNYDFWRGYNSNLGMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	230	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  A  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8763   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTGCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.0% (230/242)  IGHV4-59*01  49   .............................................TA...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  S  S  G  S  T  K  Y  N  P  S  L  G  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8763   91   TGGATTGGCTATGTCTATTCCAGTGGGAGCACCAAGTACAACCCCTCCCTCGGGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.0% (230/242)  IGHV4-59*01  139  ........G...A......A...............C...............AA.....................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  N  Y  D  F  W  R  G  Y  N 
                    Query_8763   181  CAGTTCTCCCTGAAAGTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGAATTACGATTTTTGGAGGGGTTATAAT  270
V  95.0% (230/242)  IGHV4-59*01  229  ..............GC...G..........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.7% (22/23)    IGHD3-3*01   3    ----------------------------------------------------------------................T......---  25

                                      -------------------->                                
                                       S  N  L  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_8763   271  TCTAATCTCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  323
J  100.0% (45/45)   IGHJ6*02     17   --------.............................................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_233371

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            277     8e-77
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GAATGAACCCTGAATT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATGAACCCTGAATTC	ARGMNPEF	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	39	12	0	76.5
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	213	36	0	85.5


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  I  F  R  G  H  W  M  T  W  I  R  H  L  P  D  K  G  L  
                    Query_8764  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTCGTGGCCACTGGATGACTTGGATTCGCCACCTTCCAGATAAGGGGCTGC  90
V  85.5% (213/249)  IGHV3-7*01  47   ....................................C....A..A..T.T.......GC...G.C.....GGC.....GG.........G  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     Q  W  V  A  S  I  K  D  D  G  S  E  E  H  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8764  91   AGTGGGTGGCCAGTATAAAGGACGATGGAAGTGAAGAGCACTATGGTGACTCTGTGAAGGGCCGATTCACCATCTCCCGGGACAACGCCC  180
V  85.5% (213/249)  IGHV3-7*01  137  ............AC......C.A...........GA.AT......TG..............................A.A.........A  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                     Q  N  S  L  F  L  Q  M  N  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  M  N  P  E  F  W  
                    Query_8764  181  AGAACTCTCTGTTTTTGCAGATGAACAACCTGAGAGTCGAAGACACGGCTGTATATTACTGTGCGAGAGGAATGAACCCTGAATTCTGGG  270
V  85.5% (213/249)  IGHV3-7*01  227  .......A....A.C....A.......G........C...G...........G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  94.3% (33/35)    IGHJ4*02    14   -------------------------------------------------------------------------------------.....  18

                                                                   
                                     G  Q  G  T  L  V  I  V  S  S  
                    Query_8764  271  GCCAGGGAACCCTGGTCATCGTCTCGTCAG  300
J  94.3% (33/35)    IGHJ4*02    19   ..................C......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_233370

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           420     7e-120
IGHD2-2*01                                                                                            21.8    0.046 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAGTAGTGAA	TACCAGCTGCT	GTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCC	ARSSSEYQLLFWFDP	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_8765   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCAGCTA  90
V  96.5% (279/289)  IGHV5-51*03  6    .................................................................G............C...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_8765   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATATATCCTGGTGACTCTGATGCCAGATATAGTCC  180
V  96.5% (279/289)  IGHV5-51*03  96   .........................................................C..................A.......C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  K  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8765   181  GTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTCAAGGCCTCGGACACCGC  270
V  96.5% (279/289)  IGHV5-51*03  186  .......C.....................C..........................................G.................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  S  S  E  Y  Q  L  L  F  W  F  D  P  W  G  Q  G  T  L  V  T  V  T  S
                    Query_8765   271  CATGTATTATTGTGCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCACCTC  360
V  96.5% (279/289)  IGHV5-51*03  276  .........C.........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (11/11)   IGHD2-2*01   16   -------------------------------...........------------------------------------------------  26
J  97.9% (46/47)    IGHJ5*02     5    ---------------------------------------------........................................T....  49

                                        
                                        
                    Query_8765   361  AG  362
J  97.9% (46/47)    IGHJ5*02     50   ..  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_233373

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     3e-93
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATGG	GGTTCGAGGA	CACTCGACCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTTCGAGGACACTCGACCGTTTTTGATATC	ARDGVRGHSTVFDI	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	227	15	0	93.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  S  N  S  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_8766   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAATAGTAACTCTTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.8% (227/242)  IGHV4-59*08  50   .....TCC...A...........................G....T...AC........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N  
                    Query_8766   94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTATAATCCCTCCCTTAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAACC  183
V  93.8% (227/242)  IGHV4-59*08  140  .....................................C..C........C.....................G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  V  R  G  H  S  T  V  
                    Query_8766   184  AGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGATGGGGTTCGAGGACACTCGACCGTTT  273
V  93.8% (227/242)  IGHV4-59*08  230  ...................C........C.......................C.........----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  90.0% (9/10)     IGHD3-10*01  11   -------------------------------------------------------------------......G...-------------  20
J  93.2% (41/44)    IGHJ3*02     7    ----------------------------------------------------------------------------------------..  8

                                      ------->                                  
                                      F  D  I  W  G  Q  G  T  T  I  I  V  S  S  
                    Query_8766   274  TTGATATCTGGGGCCAAGGGACAACGATCATCGTCTCTTCAG  315
J  93.2% (41/44)    IGHJ3*02     9    ........................T.G...C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_202606

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	ATTTCTTAGGG	GCTCGTC	AGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACATTTCTTAGGGGCTCGTCAGGCTTTCACTAC	TFLRGSSGFHY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	101	13	0	88.6
CDR3-IMGT (germline)	249	250	2	2	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  D  L  D  W  V  R  Q  A  S  G  K  G  L  
                    Query_8767   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGATTTGGACTGGGTCCGCCAGGCTTCCGGGAAAGGCCTGG  90
V  90.8% (227/250)  IGHV3-73*01  47   .........A.........................................C.A..C............................G....  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  M  R  T  K  D  D  N  Y  A  T  L  Y  A  A  S  V  R  G  R  F  T  I  S  R  D  
                    Query_8767   91   AGTGGGTTGGCCGTATGAGAACCAAAGATGACAATTACGCGACACTATATGCTGCGTCGGTGAGAGGCAGGTTCACCATCTCCAGAGATG  180
V  90.8% (227/250)  IGHV3-73*01  137  ................T....G.....C.A...G..........GC.................A..........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  N  M  A  Y  L  Q  M  S  G  L  D  T  E  D  T  A  L  Y  F  C  T  F  L  R  G  S  S  
                    Query_8767   181  ATTCAAAGAACATGGCTTATCTGCAAATGAGCGGCCTGGACACCGAGGACACGGCCCTTTACTTCTGTACATTTCTTAGGGGCTCGTCAG  270
V  90.8% (227/250)  IGHV3-73*01  227  ............C...G.............A.A.....A.A...............G.G..T.A......--------------------  296
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------.......--  17

                                      ---------->                                  
                                      G  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8767   271  GCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (43/44)    IGHJ4*02     5    -....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_200766

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            360     1e-101
IGHD3-16*01                                                                                           50.7    9e-11 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAAGG	ATTATGATTACGTTTGGGGGAGTTAT	TCCCTCGAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAAGGATTATGATTACGTTTGGGGGAGTTATTCCCTCGAGTAC	ARDKDYDYVWGSYSLEY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  N  M  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8768   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTTAATATGTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-7*01   47   ........................C.................G..GC...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  H  Y  V  D  S  V  K  G  R  F  T  I  P  R  D  N  A  
                    Query_8768   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAACACTATGTGGACTCTGTGAAGGGCCGATTCACCATCCCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-7*01   137  ......................................T...................................T...............  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  K  D  Y  D  Y  V  
                    Query_8768   181  GGAACTCTCTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTGTATTACTGTGCGAGAGACAAGGATTATGATTACGTTT  270
V  96.0% (240/250)  IGHV3-7*01   227  A......A................................G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (26/26)   IGHD3-16*01  3    ---------------------------------------------------------------------------...............  17

                                      GT-------------------->                                  
                                      W  G  S  Y  S  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8768   271  GGGGGAGTTATTCCCTCGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (26/26)   IGHD3-16*01  18   ...........----------------------------------------------  28
J  100.0% (37/37)   IGHJ4*02     12   --------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_111560

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           333     1e-93
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACAAGGGGATAA	CTATAGTTAC	GAATCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACAAGGGGATAACTATAGTTACGAATCT	AQGDNYSYES	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	241	2	2	0	0	100
Total	N/A	N/A	241	227	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  W  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_8769   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTTGGAACTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.2% (227/241)  IGHV3-53*01  47   ............................................A.C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  A  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  K  
                    Query_8769   91   AGTGGGTCTCAGTCATTTATGCCGGTGGTAGCACATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  94.2% (227/241)  IGHV3-53*01  137  .............T......AG...............C..C........................................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------CDR3-IMGT---------> 
                                      K  V  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  Q  G  D  N  Y  S  Y  E  S  
                    Query_8769   181  AAGTGTTGTATCTTCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCACAAGGGGATAACTATAGTTACGAATCTT  270
V  94.2% (227/241)  IGHV3-53*01  227  .CAC.C.............G.........................................-----------------------------  287
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  90.0% (9/10)     IGHD5-18*01  11   -------------------------------------------------------------------------....G.....-------  20
J  97.1% (33/34)    IGHJ4*02     15   -----------------------------------------------------------------------------------------.  15

                                                                       
                                      W  G  R  G  T  L  V  T  V  S  S  
                    Query_8769   271  GGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  303
J  97.1% (33/34)    IGHJ4*02     16   ......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_311230

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           347     7e-98
IGHD6-25*01                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGGTCTCATGG	GCAGCG	N/A	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTCTCATGGGCAGCGGACTAC	ARDGVSWAADY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  D  M  N  W  V  R  Q  A  P  G  K  G  P  
                    Query_8770   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTAACTATGACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  94.4% (236/250)  IGHV3-21*01  47   ....................................C........G....AG...................................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  R  S  S  S  H  I  Y  N  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8770   91   AGTGGGTCTCATACATTAGTAGAAGTAGTAGTCACATATATAACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-21*01  137  ............C.........T.........T.......CT................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  F  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  V  S  W  A  A  
                    Query_8770   181  AGAATTCACTGTTTCTCCAAATGAACAACCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATGGGGTCTCATGGGCAGCGG  270
V  94.4% (236/250)  IGHV3-21*01  227  ....C.......A...G..........G..........................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD6-25*01  8    -----------------------------------------------------------------------------------......-  13
J  100.0% (40/40)   IGHJ4*02     9    -----------------------------------------------------------------------------------------.  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8770   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (40/40)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_324277

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           349     2e-98
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	CAGCTA	TACAATTTTTGGAGTGG	ACACATAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACAGCTATACAATTTTTGGAGTGGACACATATTACTTTGACTGG	ANSYTIFGVDTYYFDW	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  S  S  C  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8771   1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCACCTTTAGCAGCTGTGCCATGAGCTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.1% (235/247)  IGHV3-23*01  47   .......................G........................A..............................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  G  T  T  Y  Y  A  D  P  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8771   91   AGTGGGTCTCAAGTATTAGTGGGAGTGGTGGTACGACATACTACGCAGACCCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAACTCCA  180
V  95.1% (235/247)  IGHV3-23*01  137  ...........GC.........T..........GC...............T.............G....................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  N  S  Y  T  I  F  G  V  
                    Query_8771   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAACAGCTATACAATTTTTGGAGTGG  270
V  95.1% (235/247)  IGHV3-23*01  227  .........................................................A.........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.1% (16/17)    IGHD3-3*01   5    -------------------------------------------------------------------------...G.............  21

                                      T------------------>                                  
                                      D  T  Y  Y  F  D  W  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8771   271  ACACATATTACTTTGACTGGTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  324
J  93.5% (43/46)    IGHJ4*02     3    --------..........AC...........A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_324276

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           311     5e-87
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TCACCGCGCGTTGA	CAGTGGCTGG	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATCACCGCGCGTTGACAGTGGCTGGAAACTACTACGGTATGGACGTC	AKDHRALTVAGNYYGMDV	264	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	149	45	19	5	21	42.2
FR3-IMGT	150	263	114	111	3	0	97.4
CDR3-IMGT (germline)	264	271	8	7	1	0	87.5
Total	N/A	N/A	271	237	13	21	87.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  F  T  F  S  S  Y  A  F  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8772   1    GGTCCCTGAGACTCTCCTGTGAAGGCTCTGGATTCACCTTTAGCAGCTATGCCTTCAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.5% (237/271)  IGHV3-23*01  47   .....................C..C............................A.G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----------------CDR2-IMGT-----------------><------------------------------
                                      E  W  V  S  A  I  G  S  R  V  S  P  I  G  N  G  D  G  R  A  Y  Y  A  D  S  V  K  G  R  F  
                    Query_8772   91   AGTGGGTCTCAGCTATTGGTAGTAGAGTCTCACCTATTGGTAATGGTGATGGTAGAGCATACTATGCAGACTCCGTGAAGGGCCGGTTCA  180
V  87.5% (237/271)  IGHV3-23*01  137  .................A..G....---------------------..G......CA.......C.........................  205
                                      E  W  V  S  A  I  S  G  S                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  R  A  K  
                    Query_8772   181  CCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACCGTGCGAAGG  270
V  87.5% (237/271)  IGHV3-23*01  206  .........................................................................A......T.......A.  295
                                      T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  

                                      ----------------CDR3-IMGT--------------------->                                 
                                      D  H  R  A  L  T  V  A  G  N  Y  Y  G  M  D  V  W  G  P  G  T  T  V  T  V  S  S 
                    Query_8772   271  ATCACCGCGCGTTGACAGTGGCTGGAAACTACTACGGTATGGACGTCTGGGGCCCTGGGACCACGGTCACCGTCTCCTCA  350
V  87.5% (237/271)  IGHV3-23*01  296  .-------------------------------------------------------------------------------  296
                                                                                                                      
D  100.0% (10/10)   IGHD6-19*01  9    ---------------..........-------------------------------------------------------  18
J  96.2% (51/53)    IGHJ6*02     10   ---------------------------...........................AA........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_324275

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     4e-95
IGHD1-1*01                                                                                            10.3    112  
IGHJ1*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TG	ACGAC	CTAA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGACGACCTAAAC	AKDDDLN	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  N  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8773   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATAACTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-23*01  47   .........................................AGC.G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  G  V  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8773   91   AGTGGGTCTCAACCATTAGTGGTAGTGGAGTTACCACATACTATGCAGACTCCGTAAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  ...........G.T..............T.G..G.........C...........G..................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  D  D  L  N  W  G  
                    Query_8773   181  AGAGCACGCTGTACCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTTTATTACTGCGCGAAAGATGACGACCTAAACTGGGGCC  270
V  93.2% (233/250)  IGHV3-23*01  227  ...A.........T..........................G...........A........T........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD1-1*01   13   ------------------------------------------------------------------------.....-------------  17
J  100.0% (36/36)   IGHJ1*01     17   ---------------------------------------------------------------------------------.........  25

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_8773   271  AGGGCACCCTGGTCACCGTCTCCTCAG  297
J  100.0% (36/36)   IGHJ1*01     26   ...........................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_187198

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           350     8e-99
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAA	TACGGTTTTTGGAGTGGTTA	ACCA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCAATACGGTTTTTGGAGTGGTTAACCATGACTAC	ASNTVFGVVNHDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	233	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  Y  S  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8774   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTACAGTGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  96.3% (233/242)  IGHV4-34*01  49   .....................................T.....G..............................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  Y  G  R  T  N  F  N  P  S  L  E  S  R  V  T  I  L  V  D  T  T  K  N 
                    Query_8774   91   TGGATTGGGGAAATCAATCATTATGGAAGAACCAACTTCAACCCGTCCCTCGAGAGTCGAGTCACCATATTAGTAGACACGACCAAGAAC  180
V  96.3% (233/242)  IGHV4-34*01  139  .....................AG......C.......A.............A..................C..........T........  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  N  T  V  F  G  V  V  N  H 
                    Query_8774   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGCAATACGGTTTTTGGAGTGGTTAACCAT  270
V  96.3% (233/242)  IGHV4-34*01  229  ..............................................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.0% (19/20)    IGHD3-3*01   5    -----------------------------------------------------------------....A...............-----  24
J  100.0% (41/41)   IGHJ4*02     8    -----------------------------------------------------------------------------------------.  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8774   271  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (41/41)   IGHJ4*02     9    ........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_324273

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     3e-91
IGHD1-1*01                                                                                            14.1    8.7  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCCTAGGACCGGATAAAGAC	ACAACTG	AGGACGCCCTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCTAGGACCGGATAAAGACACAACTGAGGACGCCCTTTACTTTAACTCC	ATLGPDKDTTEDALYFNS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8775   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAATTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.3% (227/246)  IGHV3-23*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  N  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8775   91   AGTGGGTCTCAGCTATCAGTGGTAGTGGTAATAACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.3% (227/246)  IGHV3-23*01  137  ................T............GG..G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  G  T  L  F  L  Q  I  H  G  L  R  A  D  D  T  A  I  Y  L  C  A  T  L  G  P  D  K  D  T  
                    Query_8775   181  GGGGCACACTGTTTCTGCAGATACACGGCCTGAGAGCCGACGACACGGCCATATATTTATGTGCGACCCTAGGACCGGATAAAGACACAA  270
V  92.3% (227/246)  IGHV3-23*01  227  A.AA...G....A......A..GA..A.............G.........G......AC.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD1-1*01   4    --------------------------------------------------------------------------------------....  7

                                      IMGT--------------------->                                  
                                      T  E  D  A  L  Y  F  N  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8775   271  CTGAGGACGCCCTTTACTTTAACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (7/7)     IGHD1-1*01   8    ...---------------------------------------------------------  10
J  95.7% (44/46)    IGHJ4*02     3    --------------......G...A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_324272

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           280     1e-77
IGHD2-21*01                                                                                           10.3    126  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGGGCGGCA	CATAT	GAAAAAAGAAGCCCTACGTCGGCGGTCCG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGCGGCACATATGAAAAAAGAAGCCCTACGTCGGCGGTCCGCTACTACGGGATGGACGTC	AKGGTYEKRSPTSAVRYYGMDV	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	210	31	0	87.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  G  V  N  G  G  S  L  S  G  S  F  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_8776   1    ACCCTGTCCCTCACCTGCGGTGTCAACGGTGGGTCCCTCAGTGGGTCTTTCTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  87.1% (210/241)  IGHV4-34*01  49   ...................C....T.T.........T.......T.AC.A......C...A......................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  D  G  G  I  T  S  Y  N  P  S  L  K  S  R  V  V  I  S  V  D  T  S  K  N 
                    Query_8776   91   TGGATCGGGGAAATCAGTGATGGTGGAATCACCAGTTACAACCCGTCCCTCAAGAGTCGAGTCGTCATTTCAGTGGACACGTCCAAGAAC  180
V  87.1% (210/241)  IGHV4-34*01  139  .....T..........A.C..A......G.....AC...........................AC...A.....A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  V  S  S  V  R  A  A  D  T  A  L  Y  F  C  A  K  G  G  T  Y  E  K  R  S  P 
                    Query_8776   181  CAGTTCTCCCTGAAGGTGAGTTCTGTGAGGGCCGCGGACACGGCACTTTACTTCTGTGCGAAGGGCGGCACATATGAAAAAAGAAGCCCT  270
V  87.1% (210/241)  IGHV4-34*01  229  ...............C....C.......CC..............TG.G..T.A........-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD2-21*01  3    ----------------------------------------------------------------------.....---------------  7

                                      -IMGT--------------------------->                                 
                                       T  S  A  V  R  Y  Y  G  M  D  V  W  G  Q  G  A  T  V  S  V  S  S 
                    Query_8776   271  ACGTCGGCGGTCCGCTACTACGGGATGGACGTCTGGGGCCAAGGGGCCACGGTCAGCGTCTCCTCA  336
J  94.2% (49/52)    IGHJ6*02     11   --------------.........T.....................A.........C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_324271

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           343     2e-96
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACCGCGAAAGTGG	GGAGTGGT	C	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACCGCGAAAGTGGGGAGTGGTCTTGATATC	ARDTAKVGSGLDI	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  A  V  S  S  S  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_8777   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCGCCGTCAGCAGCAGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  93.6% (235/251)  IGHV4-61*01  49   .................................T..........TG...G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_8777   91   CTGGAATGGATTGGGTATATCTACTACGGTGGAGACACCAAGTACAACCCCTCCCTCAAGAGTCGCGTCACCATATCATTAGACACGTCC  180
V  93.6% (235/251)  IGHV4-61*01  139  .....G.................T...A....GAG......C.......................A............G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  S  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  D  T  A  K  V  G  S 
                    Query_8777   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGGCCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATACCGCGAAAGTGGGGAGT  270
V  93.6% (235/251)  IGHV4-61*01  229  .................................A...................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-3*01   15   -------------------------------------------------------------------------------------.....  19

                                      ----------->                                  
                                       G  L  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_8777   271  GGTCTTGATATCTGGGGCCAAGGGACAATGGTCATCGTCTCTTCAG  316
D  100.0% (8/8)     IGHD3-3*01   20   ...-------------------------------------------  22
J  97.6% (41/42)    IGHJ3*02     9    ----..............................C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_324270

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            286     1e-79
IGHD6-13*01                                                                                           14.1    8.6  
IGHJ5*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAGGAC	TAGCACCACCTGG	AGCGGGAACAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGACTAGCACCACCTGGAGCGGGAACATACAACTGGTTCGACCCC	ARLGLAPPGAGTYNWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	11	1	0	91.7
CDR1-IMGT	27	50	24	17	7	0	70.8
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	125	24	19	5	0	79.2
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	231	207	24	0	89.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  L  R  F  S  S  I  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  H  I 
                    Query_8778   15   TGTGCAGCGTCTGGACTCAGGTTCAGTAGTATTTGGATGAGCTGGGTCCGCCAGGCTCCTGGGAAGGGGCTGGAGTGGGTGGCCCACATA  104
V  89.6% (207/231)  IGHV3-7*01   64   ........C......T...CC..T.....CTA...........................A........................A.....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       N  Q  D  A  S  D  H  Y  Y  L  D  S  V  K  G  R  F  T  V  S  R  D  N  A  K  S  S  V  F  L 
                    Query_8778   105  AATCAAGATGCAAGTGACCACTACTATCTGGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCAAGAGTTCAGTGTTTCTG  194
V  89.6% (207/231)  IGHV3-7*01   154  ..G.......G......GA.A......G..........................A.....................AC...C...A....  243
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------------------CDR3-IMGT-------------
                                       Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  A  R  L  G  L  A  P  P  G  A  G  T  Y  N  W 
                    Query_8778   195  CAAATGAACAGCCTGACAGCCGAAGACACGGCTGTTTATTACTGTGCGAGACTAGGACTAGCACCACCTGGAGCGGGAACATACAACTGG  284
V  89.6% (207/231)  IGHV3-7*01   244  ................G......G...........G...............---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  84.6% (11/13)    IGHD6-13*01  6    ----------------------------------------------------------.....G..G....-------------------  18
J  100.0% (51/51)   IGHJ5*02     1    ----------------------------------------------------------------------------------........  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8778   285  TTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (51/51)   IGHJ5*02     9    ...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_187193

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           364     5e-103
IGHD3-10*01                                                                                           14.1    9.3   
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGCC	ACTATGG	GGATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATC	ARSHYGDAYWYLDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	260	27	0	90.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T  S  Y 
                    Query_8779   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATCTTCACCAGTTAT  91
V  90.6% (260/287)  IGHV1-18*01  7    .................................................................T..........C...T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  F  E  R  M  G  W  I  S  P  Y  N  G  N  T  A  Y  A  E 
                    Query_8779   92   GGAATCACTTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGCGGATGGGATGGATCAGCCCTTACAATGGTAACACAGCCTACGCAGAG  181
V  90.6% (260/287)  IGHV1-18*01  97   ..T....GC...........................C.....T.................G.................AA...T...C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  F  T  V  A  T  E  T  S  T  N  T  A  F  M  E  L  R  S  L  K  A  D  D  T  A 
                    Query_8779   182  AAGTTCCAGGGCAGATTCACCGTGGCCACAGAGACTTCCACGAACACAGCCTTCATGGAGCTGCGGAGTCTGAAAGCTGACGACACGGCC  271
V  90.6% (260/287)  IGHV1-18*01  187  ...C...........G.....A..A.......C..A.......G........A..........A....C....G.T..............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  S  H  Y  G  D  A  Y  W  Y  L  D  I  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8779   272  GTCTATTACTGTGCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  359
V  90.6% (260/287)  IGHV1-18*01  277  ..G..............-----------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                          
D  100.0% (7/7)     IGHD3-10*01  6    ----------------------.......-----------------------------------------------------------  12
J  96.2% (51/53)    IGHJ2*01     1    -----------------------------------..........T.....C....................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_187197

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           302     3e-84
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGCTCCCCCCTCAC	TATATCAATGGCTGG	GACT	TTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGCTCCCCCCTCACTATATCAATGGCTGGGACTTTTGGCTTC	ACSPLTISMAGTFGF	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	242	3	3	0	0	100
Total	N/A	N/A	239	216	23	0	90.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  T  P  G  K  E  L  E  
                    Query_8780   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATAAGTAGTTATTACTGGAACTGGATCCGGCAGACCCCAGGGAAGGAACTGGAGT  93
V  90.4% (216/239)  IGHV4-59*08  50   .....TCC...A.........................C........C.......G.............C............G........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  V  Y  Y  T  G  S  A  N  Y  N  P  S  L  K  S  R  V  S  M  S  V  D  S  S  K  N  
                    Query_8780   94   GGATTGGGTATGTCTATTACACTGGGAGCGCCAACTACAACCCCTCCCTCAAGAGTCGAGTCAGCATGTCGGTGGACTCGTCCAAGAATC  183
V  90.4% (216/239)  IGHV4-59*08  140  ...........A.........G.......A.................................C...A..A..A...A..........C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  S  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  C  S  P  L  T  I  S  M  A  G  
                    Query_8780   184  AGTTCTCCCTGAGTCTGAGTTCTGTGACCGCCGCAGACACGGCCATCTATTACTGTGCGTGCTCCCCCCTCACTATATCAATGGCTGGGA  273
V  90.4% (216/239)  IGHV4-59*08  230  ............AG.....C........................G.G............-------------------------------  288
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  86.7% (13/15)    IGHD6-19*01  4    -------------------------------------------------------------------------....G..G.......--  18

                                      ---------->                                  
                                      T  F  G  F  W  G  Q  G  S  L  V  R  V  S  S  
                    Query_8780   274  CTTTTGGCTTCTGGGGCCAGGGATCCCTGGTCCGCGTCTCCTCAG  318
J  88.4% (38/43)    IGHJ4*02     6    --....A..A.............A........AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_187196

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_8781   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  96.2% (278/289)  IGHV5-51*03  6    ...............................A..............................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  G  P
                    Query_8781   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACGGCCC  180
V  96.2% (278/289)  IGHV5-51*03  96   ...................................................G............................G....A....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_8781   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAATACCGCCTACCTGCAGTGGAGTAGCCTGCAGGCCTCGGACACCGC  270
V  96.2% (278/289)  IGHV5-51*03  186  ............................................GC....................C......A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8781   271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGTCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.2% (278/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    ------------------------------------------............C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_324279

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           363     1e-102
IGHD1-1*01                                                                                            12.2    32    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTAC	AEEKRRVPRGTFHY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8782   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-23*01  47   ................................T.........G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  G  G  G  S  T  Y  Y  A  D  P  V  K  G  R  F  T  I  S  K  D  N  S  
                    Query_8782   91   AGTGGGTCTCAGCCATTAGTGGTGGTGGTGGTAGCACATACTACGCAGACCCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGA  180
V  96.4% (241/250)  IGHV3-23*01  137  .............T.........A..........................T...........................G.........C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  
                    Query_8782   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGG  270
V  96.4% (241/250)  IGHV3-23*01  227  .................................................................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------------------------......------------  17

                                      ------------->                                  
                                      G  T  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8782   271  GAACCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (43/44)    IGHJ4*02     5    ----....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_324278

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           382     3e-108
IGHD3-16*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	261	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	22	2	0	91.7
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	110	4	0	96.5
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	256	12	0	95.5


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  
                    Query_8783   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGC  90
V  95.5% (256/268)  IGHV4-59*01  26   ................T.....................................G........G..........................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_8783   91   AGCCCCCAGGAAAGGGACTGGAGTGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  95.5% (256/268)  IGHV4-59*01  116  ..........G....................GT........T.......G........................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  
                    Query_8783   181  TATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATG  270
V  95.5% (256/268)  IGHV4-59*01  206  ....................................A.....G.....................G.C.....................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     
D  94.7% (18/19)    IGHD3-16*01  7    ----------------------------------------------------------------------------------------..  8

                                      ----CDR3-IMGT------------>                                  
                                      D  D  V  W  G  S  P  G  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8783   271  ATGACGTTTGGGGGAGTCCGGGACACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  330
D  94.7% (18/19)    IGHD3-16*01  9    ..T..............-------------------------------------------  25
J  97.2% (35/36)    IGHJ4*02     13   ------------------------................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_244621

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*04                                                                                           383     1e-108
IGHD1-26*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*04	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGGGTCTT	TATAGTGGGAGC	CCGCAAGGGTC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGGGTCTTTATAGTGGGAGCCCGCAAGGGTCCTTTGACTTC	AKPGLYSGSPQGSFDF	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	68	6	0	91.9
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	16	8	0	66.7
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	269	24	0	91.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  G  A  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  
                    Query_8784   2    AGGTTCAGCTGGTGCAGTCTGGAGGAGCCTTAGTGCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCA  91
V  91.8% (269/293)  IGHV3-23*04  2    ....G.........G.......G....G...G..A.......................................................  91
                                         V  Q  L  V  E  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I  T  E  T  G  R  N  S  Y  Y  
                    Query_8784   92   CCTTCGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAACTATTACTGAGACTGGTCGTAATTCATACTACG  181
V  91.8% (269/293)  IGHV3-23*04  92   G..AT........C..........................................G......G..GT.G....G...GCA.........  181
                                      S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  K  N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  
                    Query_8784   182  CAGACTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCAAGAACACACTGTATCTGCAAATGAACACCCTGAGAGCCGAGGACA  271
V  91.8% (269/293)  IGHV3-23*04  182  ...................G....C...............T...........G...................G.................  271
                                      A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      T  A  V  Y  Y  C  A  K  P  G  L  Y  S  G  S  P  Q  G  S  F  D  F  G  G  Q  G  T  L  V  T  
                    Query_8784   272  CGGCCGTATATTACTGTGCGAAACCGGGTCTTTATAGTGGGAGCCCGCAAGGGTCCTTTGACTTCGGGGGCCAGGGAACCCTGGTCACCG  361
V  91.8% (269/293)  IGHV3-23*04  272  .......................-------------------------------------------------------------------  294
                                      T  A  V  Y  Y  C  A  K                                                                    
D  100.0% (12/12)   IGHD1-26*01  3    --------------------------------............----------------------------------------------  14
J  93.2% (41/44)    IGHJ4*02     5    -------------------------------------------------------........A.T........................  39

                                               
                                      V  P  S  
                    Query_8784   362  TCCCCTCAG  370
J  93.2% (41/44)    IGHJ4*02     40   ..T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_244620

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           369     2e-104
IGHD3-10*01                                                                                           23.8    0.011 
IGHJ1*01                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TAACGGCG	GGTTCGGGGAGT	N/A	CTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAACGGCGGGTTCGGGGAGTCTGAATACTTCCAGCAC	ARHNGGFGESEYFQH	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	112	2	0	98.2
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_8785   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  97.2% (243/250)  IGHV4-39*01  50   .....TCC...A....C.........................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  C  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_8785   94   TGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACTGCCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCA  183
V  97.2% (243/250)  IGHV4-39*01  140  ............................................AA............................................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  N  G  G  F  G  E  
                    Query_8785   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATAACGGCGGGTTCGGGGAGT  273
V  97.2% (243/250)  IGHV4-39*01  230  ......................................................................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD3-10*01  11   ------------------------------------------------------------------------------............  22

                                      ---------------->                                  
                                      S  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8785   274  CTGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (51/51)   IGHJ1*01     2    ...................................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_244622

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            307     1e-85
IGHD2-21*01                                                                                           12.2    31   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	TGGTGA	AGTATTCCTTGGATC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGGTGAAGTATTCCTTGGATCACTTTGACCAC	ARLVKYSLDHFDH	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	100	14	0	87.7
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	221	25	0	89.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  N  D  H  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_8786   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATTACCAATGATCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  89.8% (221/246)  IGHV4-4*02   49   ..................GC...........G......C.G..G.AG.A.........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  R  S  G  S  T  T  Y  N  P  S  L  Q  S  R  V  A  F  S  V  D  K  S  K 
                    Query_8786   91   GAGTGGATTGGAGAAATCTATCGTAGTGGGAGCACCACTTACAACCCGTCCCTTCAGAGTCGAGTCGCCTTCTCAGTAGACAAGTCCAAG  180
V  89.8% (221/246)  IGHV4-4*02   139  ...........G..........A..............AC..............CA...........A..A.A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  F  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  H  C  A  R  L  V  K  Y  S  L  D  H 
                    Query_8786   181  AACCAGTTCTCCCTGAGTCTGAGATCTGTGACCGCCGCCGATACGGCCGTATATCACTGTGCGAGATTGGTGAAGTATTCCTTGGATCAC  270
V  89.8% (221/246)  IGHV4-4*02   229  ................AG.....C..............G..C........G...T...........------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-21*01  13   -------------------------------------------------------------------......-----------------  18
J  95.6% (43/45)    IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                                  
                                       F  D  H  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_8786   271  TTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  313
J  95.6% (43/45)    IGHJ4*02     6    ......T................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_244625

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            327     8e-92
IGHD3-16*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCAGCCTGATCGGGACAG	TGCTTAT	N/A	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCAGCCTGATCGGGACAGTGCTTATTAC	ASQPDRDSAYY	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  I  S  G  V  S  F  S  R  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_8787   1    ACCCTGTCCCTCACCTGCGCTATATCTGGTGTCTCCTTCAGTAGAAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  92.7% (227/245)  IGHV4-4*02   49   .....................G.C.......G....A....C..T.G.......................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  D  S  G  S  T  N  Y  N  E  S  L  K  S  R  V  P  I  S  I  D  K  S  K 
                    Query_8787   91   GAGTGGATTGGGGAAATCTCTGATAGTGGGAGCACCAACTACAACGAGTCTCTCAAGAGTCGAGTCCCCATATCAATAGACAAGTCCAAG  180
V  92.7% (227/245)  IGHV4-4*02   139  ...................A.C.......................CC...C...............A........G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  H  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  Q  P  D  R  D  S  A  Y 
                    Query_8787   181  AACCAATTCTCCCTGCATCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGCCAGCCTGATCGGGACAGTGCTTAT  270
V  92.7% (227/245)  IGHV4-4*02   229  .....G.........A.G...............................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-16*01  28   -----------------------------------------------------------------------------------.......  34

                                      -->                                  
                                       Y  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_8787   271  TACTGGGGCCAGGGAACCCTGGCCACCGTCTCCTCAG  307
J  97.3% (36/37)    IGHJ4*02     12   ......................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_244627

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD1-26*01                                                                                           10.3    117   
IGHJ5*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGG	GTGGG	TA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8788   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8788   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_8788   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGGGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD1-26*01  7    ------------------------------------------------------------------------.....-------------  11
J  98.0% (50/51)    IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_8788   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  310
J  98.0% (50/51)    IGHJ5*02     12   .................................T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_244626

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD5-18*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	114	0	0	100
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	242	233	9	0	96.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_8789   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAAT  93
V  96.3% (233/242)  IGHV4-59*01  50   .....TCC...A....C....................................................................G..G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_8789   94   GGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  96.3% (233/242)  IGHV4-59*01  140  ........T.................................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y  
                    Query_8789   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTACT  273
V  96.3% (233/242)  IGHV4-59*01  230  ..........................................................G...----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  90.0% (18/20)    IGHD5-18*01  1    ---------------------------------------------------------------..........C.....T...-------  20
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8789   274  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_244629

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8790   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_8790   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_8790   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8790   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_244628

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           308     4e-86
IGHD3-10*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	GACCAAGG	GGTTCGGGGACTTA	CTGCAGCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGACCAAGGGGTTCGGGGACTTACTGCAGCCCTTTGACCAC	VRTKGFGDLLQPFDH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	222	25	0	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  T  S  G  F  T  L  S  S  S  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8791   1    GGTCCCTGAGACTCTCCTGTGAAACCTCTGGATTCACCTTGAGTAGTTCCACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.9% (222/247)  IGHV3-21*01  47   .....................C.G................C.....C.AT.G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  T  S  G  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8791   91   AGTGGGTCGCATCTATTACCAGTGGAAGCACTTACATCTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  89.9% (222/247)  IGHV3-21*01  137  ........T....C....GT...A.T..T.G......A....................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  L  S  G  L  R  V  E  D  T  A  V  Y  S  C  V  R  T  K  G  F  G  D  L  
                    Query_8791   181  AGAACTCACTGTTTCTGCAACTGAGTGGCCTGAGAGTCGAGGACACGGCTGTCTATTCCTGTGTGAGGACCAAGGGGTTCGGGGACTTAC  270
V  89.9% (222/247)  IGHV3-21*01  227  ............A.......A...ACA.........C...............G....A.....C...-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD3-10*01  11   ---------------------------------------------------------------------------..........G...-  24

                                      ---------------->                                  
                                      L  Q  P  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8791   271  TGCAGCCCTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.7% (43/44)    IGHJ4*02     5    -------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_50544

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8792   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8792   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_8792   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8792   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_50545

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD6-13*01                                                                                           12.2    32   
IGHJ5*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCGCCGACG	GCAGCA	CCACCTTCTTCTTCCCCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCGCCGACGGCAGCACCACCTTCTTCTTCCCCGACTGGTTCGACCCC	ARTADGSTTFFFPDWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  I  S  G  G  S  I  N  K  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8793   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGGCTCCATCAATAAATACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAG  90
V  94.7% (230/243)  IGHV4-59*01  49   .....................G..................G..GT...........C.............................G...  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  R  S  K  N 
                    Query_8793   91   TGGATAGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACAGGTCCAAGAAC  180
V  94.7% (230/243)  IGHV4-59*01  139  .....T..G...............................................................G......C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  V  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  A  D  G  S  T  T  F  F 
                    Query_8793   181  CAGGTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAACCGCCGACGGCAGCACCACCTTCTTC  270
V  94.7% (230/243)  IGHV4-59*01  229  ...T.........A.................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-13*01  8    -------------------------------------------------------------------------......-----------  13

                                      -------------------->                                  
                                       F  P  D  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8793   271  TTCCCCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ5*02     4    -------................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_50542

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           419     2e-119
IGHD7-27*01                                                                                           14.1    10    
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTCTCTACAGAACCGTCCTATGGGACA	CTAACTG	TGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCC	ARDPFSTEPSYGTLTVRFDP	291	350	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	9	77	69	69	0	0	100
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_8794   9    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAT  98
V  96.2% (279/290)  IGHV1-18*01  7    .....................................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       P  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  D  T  N  Y  A  Q 
                    Query_8794   99   CCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTGACACAAATTATGCACAG  188
V  96.2% (279/290)  IGHV1-18*01  97   GG..........................................................G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  D  L  R  S  L  T  S  D  D  T  A 
                    Query_8794   189  AAGTTCCAGGGCAGAGTCACCTTGACCACAGACACGTCCACGAGCACAGCCTACATGGACCTGAGGAGCCTGACATCTGACGACACGGCC  278
V  96.2% (279/290)  IGHV1-18*01  187  ...C.................A.............A.......................G.............G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------CDR3-IMGT------------------------>                  
                                       V  Y  Y  C  A  R  D  P  F  S  T  E  P  S  Y  G  T  L  T  V  R  F  D  P  W  G  Q  G  T  L 
                    Query_8794   279  GTGTATTACTGTGCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCCTGGGGCCAGGGAACCCTG  368
V  96.2% (279/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (7/7)     IGHD7-27*01  1    ---------------------------------------------------.......--------------------------------  7
J  97.8% (44/45)    IGHJ5*02     7    -------------------------------------------------------------.............................  35

                                                      
                                       V  T  V  S  T  
                    Query_8794   369  GTCACCGTCTCCACAG  384
J  97.8% (44/45)    IGHJ5*02     36   ............T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_50543

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           374     8e-106
IGHD6-25*01                                                                                           12.2    33    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TT	AGCGGC	GAAGGTAACCTTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTAGCGGCGAAGGTAACCTTATTGACTAC	AKLSGEGNLIDY	265	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	51	51	47	4	0	92.2
CDR1-IMGT	52	75	24	23	1	0	95.8
FR2-IMGT	76	126	51	51	0	0	100
CDR2-IMGT	127	150	24	20	4	0	83.3
FR3-IMGT	151	264	114	108	6	0	94.7
CDR3-IMGT (germline)	265	271	7	6	1	0	85.7
Total	N/A	N/A	271	255	16	0	94.1


Alignments

                                      <--------------------FR1-IMGT---------------------><-------CDR1-IMGT------><--------------
                                       A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  R  Y  W  I  G  W  V  R 
                    Query_8795   1    GCTGAGGTGAAGAAGCCTGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCAGGTACTGGATCGGCTGGGTGCGC  90
V  94.1% (255/271)  IGHV5-51*01  25   ..A........A.....C.............................T....................C.....................  114
                                       A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W  I  G  W  V  R 

                                      ------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------------------------
                                       Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  Y  D  V  R  Y  R  P  S  F  Q  G  Q  V 
                    Query_8795   91   CAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTATGATGTGAGATACAGACCGTCCTTCCAAGGCCAGGTC  180
V  94.1% (255/271)  IGHV5-51*01  115  ....................................................C....ACC........C.....................  204
                                       Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S  F  Q  G  Q  V 

                                      -----------------------FR3-IMGT----------------------------------------------------><-----
                                       T  I  S  A  D  R  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A  I  Y  Y  C  A  K 
                    Query_8795   181  ACCATCTCAGCCGACAGGTCCATCAGCACCGCCTTTTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGCCATTTATTACTGTGCGAAA  270
V  94.1% (255/271)  IGHV5-51*01  205  ................A.................ACC.....................................G.............G.  294
                                       T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M  Y  Y  C  A  R 

                                      --------CDR3-IMGT------------>                                  
                                       L  S  G  E  G  N  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8795   271  CTTAGCGGCGAAGGTAACCTTATTGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  334
V  94.1% (255/271)  IGHV5-51*01  295  .---------------------------------------------------------------  295
                                                                                                      
D  100.0% (6/6)     IGHD6-25*01  10   ---......-------------------------------------------------------  15
J  97.6% (41/42)    IGHJ4*02     7    ----------------------...................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_50541

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     8e-121
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ5*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGTGAGGG	GTATAGCATCTCGTCC	CC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTGAGGGGTATAGCATCTCGTCCCCCAACTGGTTCGACCCC	ARGEGYSISSPNWFDP	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	280	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  R  H
                    Query_8796   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGGTACAGTTTTACCAGGCA  90
V  96.9% (280/289)  IGHV5-51*01  6    ........................................................................A.....C........CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  A  T  R  Y  S  P
                    Query_8796   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGCTACCAGATACAGCCC  180
V  96.9% (280/289)  IGHV5-51*01  96   ..........................................................................A...............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  R  S  S  L  K  A  S  D  S  A
                    Query_8796   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGCGGAGCAGCCTGAAGGCCTCGGACTCCGC  270
V  96.9% (280/289)  IGHV5-51*01  186  ............................................G................T.......................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        M  Y  Y  F  A  R  G  E  G  Y  S  I  S  S  P  N  W  F  D  P  W  G  Q  G  T  L  V  I  V  S
                    Query_8796   271  CATGTATTACTTTGCGAGAGGTGAGGGGTATAGCATCTCGTCCCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTC  360
V  96.9% (280/289)  IGHV5-51*01  276  ...........G.......-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  93.8% (15/16)    IGHD6-6*01   3    ---------------------------........G.......-----------------------------------------------  18
J  98.0% (49/50)    IGHJ5*02     2    ---------------------------------------------......................................C......  46

                                           
                                        S  
                    Query_8796   361  CTCAG  365
J  98.0% (49/50)    IGHJ5*02     47   .....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_176669

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8797   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8797   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_8797   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8797   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_298420

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            294     6e-82
IGHD3-10*01                                                                                           12.2    32   
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GGGGAG	GGGGAATG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGAGGGGGAATGTACTACTACCACGGTTTGGACGTG	ARGGGGMYYYHGLDV	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	59	30	24	3	3	80
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	252	222	27	3	88.1


Alignments

                                      <---------FR1-IMGT----------><----------CDR1-IMGT---------><--------------------FR2-IMGT--
                                         S  L  R  L  S  C  V  I  S  G  D  S  V  S  S  T  T  N  W  W  T  W  V  R  Q  P  P  G  K  
                    Query_8798   1    GGTCCCTGAGACTCTCCTGCGTTATCTCTGGTGACTCCGTCAGCAGTACGACTAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGG  90
V  88.1% (222/252)  IGHV4-4*02   47   ..A.....TCC...A......C.G.........G....A.........G---...........G..........................  133
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S     N  W  W  S  W  V  R  Q  P  P  G  K  

                                      -------------------><-----CDR2-IMGT-----><------------------------------------------------
                                      G  P  Q  W  I  G  E  I  L  H  T  G  S  T  N  Y  D  P  S  L  K  S  R  A  T  I  S  I  H  K  
                    Query_8798   91   GGCCGCAATGGATTGGGGAAATCCTTCATACTGGGAGTACCAACTACGACCCGTCCCTCAAGAGTCGAGCCACCATATCAATACACAAGT  180
V  88.1% (222/252)  IGHV4-4*02   134  ...T.G.G...............TA.....G......C.........A.....................T..........G..G......  223
                                      G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  

                                      ----FR3-IMGT----------------------------------------------------><-----------------CDR3-IM
                                      S  E  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  G  M  Y  
                    Query_8798   181  CCGAGAATCAGTTTTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGCGAGGGGGAGGGGGAATGTACT  270
V  88.1% (222/252)  IGHV4-4*02   224  ..A....C.....C.............G........................................A...------------------  295
                                      S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                    
D  100.0% (6/6)     IGHD3-10*01  16   ------------------------------------------------------------------------......------------  21
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------------------------------------------------....  9

                                      GT----------------->                                 
                                      Y  Y  H  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8798   271  ACTACCACGGTTTGGACGTGTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  94.7% (54/57)    IGHJ6*02     10   .....T.....A.......C.................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_166145

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           388     5e-110
IGHD6-19*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATTA	GGGTATAGCACTGGCTGGTAC	GGGGTTGGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATTAGGGTATAGCACTGGCTGGTACGGGGTTGGGTAC	ARGLGYSTGWYGVGY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	249	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8799   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  99.6% (249/250)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8799   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTTGACACGTCT  180
V  99.6% (249/250)  IGHV4-31*03  139  ................................................................................A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  G  Y  S  T  G 
                    Query_8799   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGATTAGGGTATAGCACTGGC  270
V  99.6% (249/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.2% (20/21)    IGHD6-19*01  1    ---------------------------------------------------------------------------..........G....  15

                                      ----------------->                                  
                                       W  Y  G  V  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8799   271  TGGTACGGGGTTGGGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  95.2% (20/21)    IGHD6-19*01  16   ......----------------------------------------------  21
J  100.0% (37/37)   IGHJ4*02     12   ---------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_176665

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         402     3e-114
IGHD4-17*01                                                                                           12.2    37    
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCG	CGGTGA	AATCGACGGAGTA	TACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGCGGTGAAATCGACGGAGTATACCACTACAACAGTATGGACGTC	ARLRGEIDGVYHYNSMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  T  T  Y
                    Query_8800     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCTTCTGGATACAGCTTCACCACCTA  90
V  94.5% (273/289)  IGHV5-10-1*01  6    ..............................A..................................G...............T....G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  L  P  G  K  G  L  E  W  M  G  T  I  D  P  D  D  S  Y  T  N  Y  S  P
                    Query_8800     91   CTGGATCACCTGGGTGCGCCAGCTGCCCGGCAAAGGCCTGGAGTGGATGGGGACGATTGATCCTGATGACTCTTATACCAACTACAGCCC  180
V  94.5% (273/289)  IGHV5-10-1*01  96   ........G.............A.......G......................G..........AG........................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  T  D  K  S  L  T  T  A  H  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8800     181  GTCCTTCCAAGGCCACGTCACCATCTCAACTGACAAGTCCCTCACCACTGCCCACCTCCAATGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (273/289)  IGHV5-10-1*01  186  ............................G...........A...G.......T....G..G.............................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------------CDR3-IMGT--------------------->                       
                                          M  Y  Y  C  A  R  L  R  G  E  I  D  G  V  Y  H  Y  N  S  M  D  V  W  G  Q  G  T  T  V  T
                    Query_8800     271  CATGTATTACTGTGCGAGACTTCGCGGTGAAATCGACGGAGTATACCACTACAACAGTATGGACGTCTGGGGCCAAGGGACCACGGTCAC  360
V  94.5% (273/289)  IGHV5-10-1*01  276  ...................-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD4-17*01    7    ------------------------......------------------------------------------------------------  12
J  94.7% (54/57)    IGHJ6*02       6    -------------------------------------------...T.....T..G..................................  52

                                                  
                                          V  S  S 
                    Query_8800     361  CGTCTCCTCA  370
J  94.7% (54/57)    IGHJ6*02       53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_176661

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           416     2e-118
IGHD7-27*01                                                                                           14.1    9.9   
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTCCTCTACAGAACCGTCCTATGGGACA	CTAACTG	TGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTCCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCC	ARDPSSTEPSYGTLTVRFDP	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_8801   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAT  91
V  95.9% (278/290)  IGHV1-18*01  7    .....................................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       P  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  D  T  N  Y  A  Q 
                    Query_8801   92   CCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTGACACAAATTATGCACAG  181
V  95.9% (278/290)  IGHV1-18*01  97   GG..........................................................G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  L  T  T  D  T  S  T  R  T  A  Y  M  D  L  R  S  L  K  S  D  D  T  A 
                    Query_8801   182  AAGTTCCAGGGCAGAGTCACCTTGACCACAGACACGTCCACGAGGACAGCCTACATGGACCTGAGGAGCCTGAAATCTGACGACACGGCC  271
V  95.9% (278/290)  IGHV1-18*01  187  ...C.................A.............A........C..............G.............G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------CDR3-IMGT------------------------>                  
                                       V  Y  Y  C  A  R  D  P  S  S  T  E  P  S  Y  G  T  L  T  V  R  F  D  P  W  G  Q  G  T  L 
                    Query_8801   272  GTGTATTACTGTGCGAGAGATCCTTCCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCCTGGGGCCAGGGAACCCTG  361
V  95.9% (278/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (7/7)     IGHD7-27*01  1    ---------------------------------------------------.......--------------------------------  7
J  97.8% (44/45)    IGHJ5*02     7    -------------------------------------------------------------.............................  35

                                                      
                                       V  T  V  S  T  
                    Query_8801   362  GTCACCGTCTCCACAG  377
J  97.8% (44/45)    IGHJ5*02     36   ............T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_176660

Length=411
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            372     3e-105
IGHD3-22*01                                                                                           16.1    2.7   
IGHJ6*02                                                                                              69.9    4e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGCGGGGTT	CTATGACAGTTGTG	CTGACGGTTCGCCA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGCGGGGTTCTATGACAGTTGTGCTGACGGTTCGCCATACTGCTTCTTCGGTCTGAACGTC	ARGAGFYDSCADGSPYCFFGLNV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	264	26	0	91


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_8802   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAATGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  91.0% (264/290)  IGHV1-2*04   6    ..................G.............A.............G...........................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  W  I  N  P  N  S  G  N  T  K  F  A  P
                    Query_8802   91   CTTTATACACTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGGTGGGATGGATCAACCCTAACAGTGGAAACACGAAGTTTGCGCC  180
V  91.0% (264/290)  IGHV1-2*04   96   ..A...G.............................G.........A.........................TGG...A..C.A...A.A  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  V  Y  M  E  V  S  R  L  K  S  D  N  T  A
                    Query_8802   181  GAAGTTTCAGGGCTGGGTCACCATGACGAGGGACACGTCCATCAGTACAGTCTACATGGAGGTGAGCAGGCTGAAAAGTGACAACACGGC  270
V  91.0% (264/290)  IGHV1-2*04   186  ...........................C.................C....C..........C............G.TC....G.......  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  G  A  G  F  Y  D  S  C  A  D  G  S  P  Y  C  F  F  G  L  N  V  W  G  Q
                    Query_8802   271  CGTATATTTTTGTGCGAGAGGAGCGGGGTTCTATGACAGTTGTGCTGACGGTTCGCCATACTGCTTCTTCGGTCTGAACGTCTGGGGCCA  360
V  91.0% (264/290)  IGHV1-2*04   276  ...G....AC..........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD3-22*01  7    ------------------------------......T...A...----------------------------------------------  20
J  87.7% (50/57)    IGHJ6*02     6    ----------------------------------------------------------....A..A..A....A..G.............  37

                                                               
                                        G  T  A  V  T  V  S  S 
                    Query_8802   361  AGGGACCGCGGTCACCGTCTCTTCA  385
J  87.7% (50/57)    IGHJ6*02     38   .......A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40288536


Query= Query_176663

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           338     5e-95
IGHD6-13*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTC	TAGCAGCATCTGG	GGTTGGCGCTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCTAGCAGCATCTGGGGTTGGCGCTCACTACTACGGTGCGGACGTC	ATLAASGVGAHYYGADV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  I  Y  G  M  H  W  V  R  Q  A  P  D  R  G  L  
                    Query_8803   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGACTCACCTTCAGTATCTATGGAATGCACTGGGTCCGCCAGGCTCCAGACAGGGGACTGG  90
V  93.9% (231/246)  IGHV3-33*01  47   ................................T............G......C.........................G..A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8803   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATTTTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.9% (231/246)  IGHV3-33*01  137  .......................................AC.................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  D  T  L  Y  L  Q  M  N  S  L  T  V  E  D  T  A  V  Y  Y  C  A  T  L  A  A  S  G  V  G  
                    Query_8803   181  AGGACACGTTGTATCTGCAAATGAACAGTCTGACAGTGGAGGACACGGCTGTGTATTATTGTGCGACTCTAGCAGCATCTGGGGTTGGCG  270
V  93.9% (231/246)  IGHV3-33*01  227  ..A.....C...................C....G..CC....................C.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.3% (12/13)    IGHD6-13*01  6    ---------------------------------------------------------------------........G....--------  18

                                      GT-------------------->                                 
                                      A  H  Y  Y  G  A  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8803   271  CTCACTACTACGGTGCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  96.2% (51/53)    IGHJ6*02     10   ---...........AT........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_176662

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           321     7e-90
IGHD3-3*01                                                                                            12.2    33   
IGHJ4*02                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CGCGGCCTGCCACATATGAGTCTGATGGAAGTGCTA	ATTTCGATT	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCGCGGCCTGCCACATATGAGTCTGATGGAAGTGCTAATTTCGATTCTGACTGC	AKARPATYESDGSANFDSDC	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	25	4	0	86.2
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  F  T  F  R  S  Y  A  L  T  W  V  R  Q  P  P  G  K  G  L  
                    Query_8804   1    GGTCCCTGAGACTCTCCTGTGAAGGCAGTGGATTCACCTTTAGAAGCTATGCCTTGACCTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  91.2% (227/249)  IGHV3-23*01  47   .....................C..C.TC...............C.........A...G.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  G  G  S  G  N  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8804   91   AGTGGGTCTCAAGTATTGGTGGTAGTGGCAATAATACATACTATGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAATTCCA  180
V  91.2% (227/249)  IGHV3-23*01  137  ...........GC....A..........TGG..GC........C....................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  H  L  Q  M  N  N  L  R  V  E  D  T  A  V  Y  Y  C  A  K  A  R  P  A  T  Y  E  
                    Query_8804   181  AGAACACGCTGCATCTCCAAATGAACAACCTGAGAGTCGAGGACACGGCCGTATATTACTGTGCGAAAGCGCGGCCTGCCACATATGAGT  270
V  91.2% (227/249)  IGHV3-23*01  227  ...........T....G..........G........C................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      R3-IMGT------------------------>                                  
                                      S  D  G  S  A  N  F  D  S  D  C  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_8804   271  CTGATGGAAGTGCTAATTTCGATTCTGACTGCTGGGGCCAGGGTTCGCTGGTCACCGTCTCCTCAG  336
D  88.9% (8/9)      IGHD3-3*01   3    ---------------...A.....------------------------------------------  11
J  90.2% (37/41)    IGHJ4*02     8    -------------------------.....A............AA.C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_249088

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         341     6e-96
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GACTGTTAAACCCAAA	CAGTGGCTGG	GGGGACGGTTCTACTCTCG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGACTGTTAAACCCAAACAGTGGCTGGGGGGACGGTTCTACTCTCGCTACGGTATGGACGTC	AKETVKPKQWLGGRFYSRYGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  S  F  S  G  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8805     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTGGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-30-3*01  47   ....................................C.......A.............................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  S  V  I  S  Y  D  G  S  N  K  D  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_8805     91   AGTGGGTGTCAGTTATATCATATGATGGAAGCAATAAAGACTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-30-3*01  137  ........G.............................T..................A................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><---------------------------
                                        M  N  T  V  F  L  H  M  S  S  L  R  P  E  D  T  A  I  Y  Y  C  A  K  E  T  V  K  P  K  Q  
                    Query_8805     181  TGAACACGGTGTTTCTGCACATGAGCAGCCTGAGACCCGAGGACACGGCCATATATTACTGTGCGAAAGAGACTGTTAAACCCAAACAGT  270
V  93.6% (234/250)  IGHV3-30-3*01  227  A.......C...A......A....A..........G.T...........TG.G.............G...--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD6-19*01    9    --------------------------------------------------------------------------------------....  12

                                        --CDR3-IMGT----------------------------->                             
                                        W  L  G  G  R  F  Y  S  R  Y  G  M  D  V  W  G  Q  G  T  T  V  A  V  S
                    Query_8805     271  GGCTGGGGGGACGGTTCTACTCTCGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTC  340
D  100.0% (10/10)   IGHD6-19*01    13   ......----------------------------------------------------------------  18
J  97.8% (44/45)    IGHJ6*02       14   -------------------------.....................................A.......  58


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_336680

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           427     9e-122
IGHD1-26*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCG	AGTGGGAGCTACT	TGGGGCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTAC	ARDLEWELLGAFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	282	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  R  Y
                    Query_8806   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGATA  90
V  96.9% (282/291)  IGHV1-69*06  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  S  F  G  T  A  H  Y  A  Q
                    Query_8806   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTAGCTTTGGAACAGCACACTACGCACA  180
V  96.9% (282/291)  IGHV1-69*06  96   .................................................................T......T......A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  R  S  T  S  T  A  Y  M  E  L  S  S  L  S  S  E  D  T  A
                    Query_8806   181  GAGATTCCAGGGCAGAGTCACGATTACCGCGGACAGATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGCTCTGAGGACACGGC  270
V  96.9% (282/291)  IGHV1-69*06  186  ..AG...............................A.......................................A..............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  D  L  E  W  E  L  L  G  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8806   271  CGTGTATTACTGTGCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  96.9% (282/291)  IGHV1-69*06  276  .....................--------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                       
D  100.0% (13/13)   IGHD1-26*01  6    --------------------------.............--------------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     6    ----------------------------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_95453

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           343     2e-96
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACATG	ATTACCATGAT	TCCA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAACATGATTACCATGATTCCAGATGCTTTTGATATC	ARDNMITMIPDAFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  S  S  I  N  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  A 
                    Query_8807   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTAGCTCCATCAACAGTGGAGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGCC  90
V  93.6% (235/251)  IGHV4-31*03  49   ..............................G.........G......T........................................G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  D  S  G  G  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  E  T  S 
                    Query_8807   91   CTGGAGTGGATTGGATACATCTATGACAGTGGGGGCACCTCCTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCACTAGAAACGTCT  180
V  93.6% (235/251)  IGHV4-31*03  139  ..............G.........T........A......A...........................T.........G....C......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  K  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  D  N  M  I  T  M  I 
                    Query_8807   181  AGGAAACAGTTCTCCCTGAAGTTGAGCTCTGTGACTGTCGCGGACACGGCCGTATATTACTGTGCGAGAGATAACATGATTACCATGATT  270
V  93.6% (235/251)  IGHV4-31*03  229  .A...C...............C...............C...............G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD3-22*01  3    ------------------------------------------------------------------------------.....T.....-  13

                                      ----------------->                                  
                                       P  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8807   271  CCAGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  100.0% (49/49)   IGHJ3*02     2    ---.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_192389

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            364     5e-103
IGHD3-22*01                                                                                           18.0    0.57  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGGAGGG	GGTTATCACTAC	GTCC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGGAGGGGGTTATCACTACGTCCTTGATTAC	ARVGGGYHYVLDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8808   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-7*03   47   ..............................................C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  R  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8808   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAAAGGTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (241/249)  IGHV3-7*03   137  ......................................TAC.................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  G  G  G  Y  H  Y  
                    Query_8808   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTTTATTACTGTGCGAGAGTCGGAGGGGGTTATCACTACG  270
V  96.8% (241/249)  IGHV3-7*03   227  ............A.....................................G.G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD3-22*01  20   -----------------------------------------------------------------------------......T.....-  31

                                      ---------->                                  
                                      V  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8808   271  TCCTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ4*02     7    ---....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_249089

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           297     7e-83
IGHD2-21*01                                                                                           19.9    0.16 
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-21*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTGTTCCAAT	TGGTGGTTATTGGTAT	CCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTGTTCCAATTGGTGGTTATTGGTATCCCTTCGATCCC	ARDRVPIGGYWYPFDP	255	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	123	36	16	8	12	44.4
FR3-IMGT	124	254	114	105	9	0	92.1
CDR3-IMGT (germline)	255	262	8	8	0	0	100
Total	N/A	N/A	262	228	22	12	87


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8809   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTACTTATAGTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  87.0% (228/262)  IGHV3-30*04  47   .....................................C.......GC...GC......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----CDR2-IMGT----><--------------------------------------------------------
                                      E  W  V  A  V  I  A  Y  D  G  N  T  Y  Y  A  D  S  Y  Y  A  D  S  V  K  G  R  F  T  I  S  
                    Query_8809   91   AGTGGGTGGCAGTTATTGCATATGATGGCAATACATACTACGCAGACTCCTACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCA  180
V  87.0% (228/262)  IGHV3-30*04  137  ................AT..........A.G..------------.TAAA..........................A.............  214
                                      E  W  V  A  V  I  S  Y  D  G  S              N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  

                                      ----FR3-IMGT-------------------------------------------------------------><---------------
                                      R  D  N  S  R  D  T  L  Y  L  Q  M  N  R  L  R  P  E  D  T  A  V  Y  Y  C  A  R  D  R  V  
                    Query_8809   181  GAGACAATTCCAGGGACACCCTCTATCTGCAAATGAACCGCCTGAGACCTGAGGACACCGCTGTCTATTACTGTGCGAGAGATCGTGTTC  270
V  87.0% (228/262)  IGHV3-30*04  215  ............A.A....G..G...............A........G..........G.....G.................--------  296
                                      R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R           

                                      ----CDR3-IMGT------------------>                                  
                                      P  I  G  G  Y  W  Y  P  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8809   271  CAATTGGTGGTTATTGGTATCCCTTCGATCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  87.5% (14/16)    IGHD2-21*01  10   ----.......G....C...----------------------------------------------  25
J  97.7% (42/43)    IGHJ5*02     9    -----------------------.....C.....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_109212

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           388     4e-110
IGHD3-10*01                                                                                           12.2    31    
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TCGGGG	GGGGGCCGAGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGGGGGGGGCCGAGTACTACTTTGACTAC	ARDRGGAEYYFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	249	1	0	99.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8810   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGGAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  99.6% (249/250)  IGHV3-33*01  47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8810   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  99.6% (249/250)  IGHV3-33*01  137  ..........................................................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  G  G  A  E  Y  
                    Query_8810   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGGGGGGGGGCCGAGTACT  270
V  99.6% (249/250)  IGHV3-33*01  227  ......................................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01  14   ----------------------------------------------------------------------......--------------  19
J  100.0% (48/48)   IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8810   271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_95005

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           324     8e-91
IGHD1-7*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGACGTGG	ACTGGAACT	CAGGGTCCCTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGACGTGGACTGGAACTCAGGGTCCCTATGACTAC	AKGTWTGTQGPYDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  R  A  T  S  G  F  T  F  S  G  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_8811   1    GGTCCCTGAGACTCTCCCGTGCAACCTCTGGATTCACGTTCAGTGGCTACGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-23*01  47   .................T.....G.............C..T..CA....T.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  T  G  G  G  T  Y  L  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8811   91   AGTGGGTCTCAGCTATCAGTGGCACTGGTGGTGGCACATACCTCGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  91.6% (228/249)  IGHV3-23*01  137  ................T.....T.G.......A........TA..........................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  M  V  Y  L  E  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  G  T  W  T  G  T  Q  
                    Query_8811   181  AGAACATGGTGTATCTCGAAATGAACAGCCTGCGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGGGACGTGGACTGGAACTCAGG  270
V  91.6% (228/249)  IGHV3-23*01  227  ......C.C.......GC..............A.................G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD1-7*01   7    -----------------------------------------------------------------------------.........----  15

                                      ------------->                                  
                                      G  P  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8811   271  GTCCCTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (41/41)   IGHJ4*02     8    -------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_321171

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           419     2e-119
IGHD3-3*01                                                                                            21.8    0.048 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GACGCCGAC	TTTGGAGTGGT	CCGGAGGGA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGACGCCGACTTTGGAGTGGTCCGGAGGGATACTACTACTACGATATGGACGTC	ATGRRLWSGPEGYYYYDMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  C  T  F  S  S  Y
                    Query_8812   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCAGGATGCACCTTCAGCAGCTA  90
V  96.2% (279/290)  IGHV1-69*01  6    ..................G..................................................T...G................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  V  F  G  T  A  N  Y  A  Q
                    Query_8812   91   TGTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTGTCTTTGGAACAGCAAACTACGCACA  180
V  96.2% (279/290)  IGHV1-69*01  96   ..C.............................................................A.......T.................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  L  Q  G  R  V  T  I  S  A  D  E  S  T  S  A  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_8812   181  GAAGTTGCAGGGCAGAGTCACGATTAGCGCGGACGAATCCACGAGCGCAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  96.2% (279/290)  IGHV1-69*01  186  ......C...................C...................A...........................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        V  Y  Y  C  A  T  G  R  R  L  W  S  G  P  E  G  Y  Y  Y  Y  D  M  D  V  W  G  Q  G  T  T
                    Query_8812   271  CGTGTATTATTGTGCGACAGGACGCCGACTTTGGAGTGGTCCGGAGGGATACTACTACTACGATATGGACGTCTGGGGCCAAGGGACCAC  360
V  96.2% (279/290)  IGHV1-69*01  276  .........C.......G..----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (11/11)   IGHD3-3*01   12   -----------------------------...........--------------------------------------------------  22
J  98.1% (53/54)    IGHJ6*02     6    -------------------------------------------------.............G...........................  46

                                                   
                                        V  T  V  S 
                    Query_8812   361  GGTCACCGTCTCC  373
J  98.1% (53/54)    IGHJ6*02     47   .............  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_95007

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           382     3e-108
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTTGTGG	TACTCTGGTTCGGGGAGT	AAAACCCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTTGTGGTACTCTGGTTCGGGGAGTAAAACCCATTTTGACTAC	ARGLWYSGSGSKTHFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_8813   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (247/250)  IGHV4-31*03  49   .............................................................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8813   91   CTGGAGTGGATTGGGTACATTTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (247/250)  IGHV4-31*03  139  ....................C.....................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  W  Y  S  G  S 
                    Query_8813   181  AAGAACCAGTTCTCCCTGAAGCTGCGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGTTTGTGGTACTCTGGTTCG  270
V  98.8% (247/250)  IGHV4-31*03  229  ........................A.............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  5    ------------------------------------------------------------------------------....A.......  16

                                      MGT-------------------->                                  
                                       G  S  K  T  H  F  D  Y  W  G  Q  G  T  L  V  T  V  A  S  
                    Query_8813   271  GGGAGTAAAACCCATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCGCCTCAG  328
D  94.4% (17/18)    IGHD3-10*01  17   ......----------------------------------------------------  22
J  97.7% (42/43)    IGHJ4*02     6    ---------------....................................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_95000

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*03                                                                                           316     2e-88
IGHD2-8*02                                                                                            12.2    30   
IGHJ4*02                                                                                              44.9    1e-08


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGGGGGGGAT	CTGGTG	C	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGACGGGGGGGGATCTGGTGCCTAC	TRDGGGSGAY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  G  S  Y  W  M  H  W  V  R  Q  A  P  R  K  G  L  
                    Query_8814   1    GGTCCCTGAGACTCTCCTGTGTGGCCTCTGGATTCACCTTCGGTAGTTACTGGATGCACTGGGTCCGCCAAGCTCCGAGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-74*03  47   .....................CA..................A....C.............................AG............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  I  N  P  N  G  G  T  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  V  
                    Query_8814   91   AGTGGGTCTCACGAATTAATCCTAATGGGGGCACTACATCTTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGTCA  180
V  90.4% (226/250)  IGHV3-74*03  137  T............T......AG.G.....A.T.GC...A.G..............................................C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  D  G  G  G  S  G  A  
                    Query_8814   181  AGAACACACTGTATTTGCAGATGGACAGTCTGAGAGCCGAGGACACGGCTGTGTATTATTGTACAAGAGACGGGGGGGGATCTGGTGCCT  270
V  90.4% (226/250)  IGHV3-74*03  227  .......G......C....A...A..................................C...G.......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-8*02   12   ---------------------------------------------------------------------------------......---  17
J  86.8% (33/38)    IGHJ4*02     11   ----------------------------------------------------------------------------------------..  12

                                      ->                                  
                                      Y  G  G  Q  G  S  L  V  P  V  P  P  
                    Query_8814   271  ACGGGGGCCAGGGATCCCTGGTCCCCGTCCCCCCAG  306
J  86.8% (33/38)    IGHJ4*02     13   ..T...........A........A.....T..T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_109217

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD1-26*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	GGG	GGTCTAGTGGAAGGTACTAC	CTCCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTAC	ARGGLVEGTTSFFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_8815   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTAGTACCTA  90
V  97.6% (282/289)  IGHV5-51*03  6    ..............................A....................................................CC.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_8815   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  97.6% (282/289)  IGHV5-51*03  96   .................................................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8815   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  A  R  G  G  L  V  E  G  T  T  S  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8815   271  CATTTATTACTGTGCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCGTC  360
V  97.6% (282/289)  IGHV5-51*03  276  ...G............A..-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  85.0% (17/20)    IGHD1-26*01  1    ----------------------...A......G..C......------------------------------------------------  20
J  97.7% (43/44)    IGHJ4*02     5    ------------------------------------------------.......................................C..  46

                                        
                                        
                    Query_8815   361  AG  362
J  97.7% (43/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_321175

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            363     1e-102
IGHD2-15*01                                                                                           14.1    8.4   
IGHJ6*02                                                                                              50.7    2e-10 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGGAGCCTTCTATTTCTT	CTACTCC	ACTT	TGGCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAAGGAGCCTTCTATTTCTTCTACTCCACTTTGGCCGTC	AREGAFYFFYSTLAV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8816   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGGCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.4% (241/250)  IGHV3-9*01   47   ...................................................C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  R  W  N  S  D  T  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8816   91   AGTGGGTCTCAGGTATTAGATGGAACAGTGATACCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (241/250)  IGHV3-9*01   137  ...................T.....T....G..G........................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  R  E  G  A  F  Y  F  F  
                    Query_8816   181  AGAACTCGCTGTATCTGCAAATGAATAGTCTGAGACCTGAGGACACGGCCTTGTATTACTGTGCAAGAGAAGGAGCCTTCTATTTCTTCT  270
V  96.4% (241/250)  IGHV3-9*01   227  .......C.................C.........G..............................A...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD2-15*01  25   ----------------------------------------------------------------------------------------..  26

                                      ---------------->                                 
                                      Y  S  T  L  A  V  W  G  H  V  T  K  V  T  L  S  S 
                    Query_8816   271  ACTCCACTTTGGCCGTCTGGGGCCACGTGACCAAGGTCACCCTCTCCTCA  320
D  100.0% (7/7)     IGHD2-15*01  27   .....---------------------------------------------  31
J  87.8% (36/41)    IGHJ6*02     22   ---------...A............A.G.....C.......G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_109218

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD2-15*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCATTGTGGA	AGTGGTGG	CTGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGTTCATTGTGGAAGTGGTGGCTGTTTCTACTTTGACATC	TRVHCGSGGCFYFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8817   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S 
                    Query_8817   91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGCTACCATATCAGTAGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ................A.................G................................T......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  E  L  R  S  V  T  A  A  D  A  A  L  Y  Y  C  T  R  V  H  C  G  S  G  G 
                    Query_8817   181  AAGAACCAGTTCTCCCTGGAGCTGAGGTCTGTGACCGCCGCGGACGCGGCCCTGTATTACTGTACGAGAGTTCATTGTGGAAGTGGTGGC  270
V  96.0% (240/250)  IGHV4-31*03  229  ..................A.......C........T.........A.....G...........G......--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD2-15*01  11   ---------------------------------------------------------------------------------........-  18

                                      ----------------->                                  
                                       C  F  Y  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8817   271  TGTTTCTACTTTGACATCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  95.7% (45/47)    IGHJ4*02     2    -----..........TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_109219

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           311     4e-87
IGHD3-3*01                                                                                            23.8    0.011
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GAGTTATTCTTA	TTGGAGTGGTTA	CCCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGAGTTATTCTTATTGGAGTGGTTACCCATTTTGACTAT	AKGVILIGVVTHFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	224	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  P  M  S  W  V  R  Q  A  P  G  E  G  L  
                    Query_8818   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCAGCTTTCCCATGAGTTGGGTCCGCCAGGCTCCCGGGGAGGGGCTGG  90
V  90.0% (224/249)  IGHV3-23*01  47   ........................................T.......A.G.......C.................A...A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  V  N  N  N  G  G  S  S  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_8818   91   AGTGGGTCTCAGGTGTCAACAATAATGGTGGAAGTTCATACTACGCAGACTCCGTGAGGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  90.0% (224/249)  IGHV3-23*01  137  ............C.A.T.GTGG..G......T..CA.....................A...........................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  K  M  L  Y  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  A  K  G  V  I  L  I  G  V  
                    Query_8818   181  AAAAAATGCTCTATCTGCAAATGAACAGCCTGACAGCCGAGGACACGGCCGTTTATTACTGTGCGAAAGGAGTTATTCTTATTGGAGTGG  270
V  90.0% (224/249)  IGHV3-23*01  227  .G..C.C...G......................G..................A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD3-3*01   13   ---------------------------------------------------------------------------------.........  21

                                      ---------------->                                  
                                      V  T  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8818   271  TTACCCATTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (12/12)   IGHD3-3*01   22   ...------------------------------------------------  24
J  97.7% (42/43)    IGHJ4*02     6    --------........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_95008

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8819   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_8819   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_8819   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_8819   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_95009

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           329     3e-92
IGHD3-22*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	230	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	24	0	0	100
FR3-IMGT	116	229	114	110	4	0	96.5
CDR3-IMGT (germline)	230	236	7	7	0	0	100
Total	N/A	N/A	224	217	7	0	96.9


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_8820   13   GTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  96.9% (217/224)  IGHV3-33*01  72   ...................AG..A..................................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N
                    Query_8820   103  TGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACGTTGTATCTGCAAATGAA  192
V  96.9% (217/224)  IGHV3-33*01  162  .............................................................T...........C................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------------------CDR3-IMGT---------------------
                                        S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  T  T  G  R  D  P  F  D  I
                    Query_8820   193  CAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATAT  282
V  96.9% (217/224)  IGHV3-33*01  252  .......A...................G................----------------------------------------------  295
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  88.9% (16/18)    IGHD3-22*01  5    -------------------------------------------------------..........G..G....-----------------  22
J  94.0% (47/50)    IGHJ3*02     1    ---------------------------------------------------------------------------....G..........  15

                                      >                                  
                                        W  G  Q  G  T  I  L  T  V  S  S  
                    Query_8820   283  CTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  317
J  94.0% (47/50)    IGHJ3*02     16   ..................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_206173

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           355     3e-100
IGHD6-6*01                                                                                            23.8    0.011 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	TC	ATAGCAGCTCGT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACTCATAGCAGCTCGTACTACTTTGACTAC	TTHSSSYYFDY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	30	0	0	100
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	240	13	0	94.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  T  W  M  S  W  V  R  Q  A  P  G  K  G  P  
                    Query_8821   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAACACCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  94.9% (240/253)  IGHV3-15*01  47   .......T.............................T.........G.......................................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  A  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  N  G  R  F  T  V  S  R  D  
                    Query_8821   91   AGTGGGTCGCCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCCGCACCCGTGAACGGCAGATTCACCGTCTCAAGAGATG  180
V  94.9% (240/253)  IGHV3-15*01  137  .......T.G..........................................T...........A............A............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  L  K  N  T  R  Y  L  Q  M  N  S  L  K  I  E  D  T  A  V  Y  Y  C  T  T  H  S  S  S  Y  
                    Query_8821   181  ATTTAAAAAACACGCGGTATCTGCAAATGAACAGCCTGAAAATCGAGGACACAGCCGTGTATTATTGTACCACTCATAGCAGCTCGTACT  270
V  94.9% (240/253)  IGHV3-15*01  227  ...C...........T..........................C.....................C........-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (12/12)   IGHD6-6*01   5    ---------------------------------------------------------------------------............---  16
J  97.9% (47/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  F  D  Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_8821   271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  315
J  97.9% (47/48)    IGHJ4*02     4    ......................................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_20716

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           316     2e-88
IGHD6-6*01                                                                                            12.2    31   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCCCGC	GTATACCAACTC	TC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCCCGCGTATACCAACTCTCTTGACTCC	AREPAYTNSLDS	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  Y  D  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8822   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAAATATGACATGAACTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-48*03  47   .............................................GT.....A..............C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  G  D  S  G  A  T  I  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_8822   91   AGTGGATTTCATACATTGGTGATAGCGGTGCAACCATATATTACGCTGATTCTGTGAAGGGCCGGTTCACCGTCTCCAGAGACAACGCCA  180
V  90.4% (226/250)  IGHV3-48*03  137  .....G...........A..AG...T...AGT........C.....A..C..............A......A..................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      N  N  S  L  Y  L  H  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  R  E  P  A  Y  T  N  S  
                    Query_8822   181  ACAACTCACTTTATCTACACATGAACAGCCTGAGAGTCGAGGACACCGCTGTTTATTTCTGTGCGAGAGAGCCCGCGTATACCAACTCTC  270
V  90.4% (226/250)  IGHV3-48*03  227  .G........G.....G..A................C.........G..........A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  83.3% (10/12)    IGHD6-6*01   3    ----------------------------------------------------------------------------.....G..G...--  14

                                      ------->                                  
                                      L  D  S  W  G  Q  G  T  P  V  T  V  S  A  
                    Query_8822   271  TTGACTCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCGCAG  312
J  92.9% (39/42)    IGHJ4*02     7    ......A.................T.............T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_20717

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           322     2e-90
IGHD6-19*01                                                                                           27.6    8e-04
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGGGGA	AGCAGTGGCTGGTA	GATATTCAGGAA	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGGGGAAGCAGTGGCTGGTAGATATTCAGGAATACGACTACTATGGTATGGACGTC	ARWGKQWLVDIQEYDYYGMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  A  F  G  D  Y  S  M  N  W  V  R  Q  A  P  G  T  G  L  
                    Query_8823   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCGCCTTCGGTGATTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGACGGGGCTGG  90
V  91.5% (227/248)  IGHV3-21*01  47   .....................C.............A.....A..AGC..................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  L  T  S  Y  Y  T  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8823   91   AGTGGGTCTCATCTATTAGTCTTACTAGTTATTACACATACTACGCGGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.5% (227/248)  IGHV3-21*01  137  .............C......AG..G....AG.....T.........A......G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  W  G  K  Q  W  L  V  
                    Query_8823   181  AGAATACACTGTATCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCGGTTTATTACTGTGCGAGATGGGGGAAGCAGTGGCTGGTAG  270
V  91.5% (227/248)  IGHV3-21*01  227  ....CT...................C.......................T..G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD6-19*01  7    ---------------------------------------------------------------------------..............-  20

                                      DR3-IMGT-------------------------->                                 
                                      D  I  Q  E  Y  D  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8823   271  ATATTCAGGAATACGACTACTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  338
J  94.7% (54/57)    IGHJ6*02     6    -----------...T.......C.........................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_20711

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            436     2e-124
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	70	68	65	3	0	95.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <-----------------------------FR1-IMGT-----------------------------><-------CDR1-IMGT-----
                                         L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y  
                    Query_8824   3    AGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTACT  92
V  98.3% (284/289)  IGHV1-2*04   8    ................G.............AG..........................................................  97
                                         L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y  

                                      -><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------------
                                      Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q  
                    Query_8824   93   ATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACAGA  182
V  98.3% (284/289)  IGHV1-2*04   98   ..........................................................................................  187
                                      Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q  

                                      ----------------------------------------FR3-IMGT------------------------------------------
                                      K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  G  R  L  R  S  D  D  T  A  
                    Query_8824   183  AGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGGGCAGGCTGAGATCTGACGACACGGCCG  272
V  98.3% (284/289)  IGHV1-2*04   188  ..............................................................A...........................  277
                                      K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A  

                                      ----------><-----------------------------CDR3-IMGT----------------------------->          
                                      V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W  G  Q  
                    Query_8824   273  TGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGGGGCCAAG  362
V  98.3% (284/289)  IGHV1-2*04   278  ......A............-----------------------------------------------------------------------  296
                                      V  Y  Y  C  A  R                                                                          
D  94.7% (18/19)    IGHD3-22*01  7    -------------------------------...........G.......----------------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    --------------------------------------------------------....A.............................  39

                                                             
                                      G  T  T  V  T  V  S  S 
                    Query_8824   363  GGACCACGGTCACCGTCTCCTCA  385
J  98.2% (56/57)    IGHJ6*02     40   .......................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_20713

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGTGAGGAAGGA	TACTATGATACTAGTGGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGTGAGGAAGGATACTATGATACTAGTGGTTATTCGGACTAT	AKDGEEGYYDTSGYSDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  T  P  G  K  G  L  
                    Query_8825   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGATATGCCATGTCCTGGGTCCGCCAGACTCCAGGGAAGGGCCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ...........................................C..C.........AG.............G.............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  V  S  G  S  G  G  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8825   91   AGTGGGTCTCAACAGTGAGTGGTAGTGGAGGTGGCACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  ...........G.TA.T...........T...A..........C..............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  I  Y  Y  C  A  K  D  G  E  E  G  Y  Y  
                    Query_8825   181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAACCGAGGACACGGCCATATATTACTGTGCGAAAGATGGTGAGGAAGGATACTATG  270
V  93.6% (234/250)  IGHV3-23*01  227  ..............C....................G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.5% (21/22)    IGHD3-22*01  5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                      D  T  S  G  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8825   271  ATACTAGTGGTTATTCGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.5% (21/22)    IGHD3-22*01  12   ...G...........------------------------------------------  26
J  97.5% (39/40)    IGHJ4*02     9    -----------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_20718

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_8826   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_8826   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_8826   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_8826   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_252564

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTCC	AEEKRRVPRGTFHS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  T  Y  A  V  S  W  V  R  Q  T  P  G  K  G  L  
                    Query_8827   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCGTGAGCTGGGTCCGCCAGACTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-23*01  47   ................................T.........G..G.......A.................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  G  G  A  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  
                    Query_8827   91   AGTGGGTCTCAGCCATTAGTGGTGGTGGTGCTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGA  180
V  94.8% (237/250)  IGHV3-23*01  137  .............T.........A......G...............................................G.........C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  R  L  R  A  D  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  
                    Query_8827   181  AGAACACGCTGTATCTGCAAATGAACAGACTGAGAGCCGACGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGG  270
V  94.8% (237/250)  IGHV3-23*01  227  ............................C...........G........................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------------------------......------------  17

                                      ------------->                                  
                                      G  T  F  H  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8827   271  GAACCTTTCACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  95.5% (42/44)    IGHJ4*02     5    ----....G...A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_206399

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           271     6e-75
IGHD2-2*01                                                                                            12.2    30   
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GGGCCAGAGA	AGTAGGACC	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGAGGGCCAGAGAAGTAGGACCCTTGACTAC	ATEGQRSRTLDY	235	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	19	5	0	79.2
FR2-IMGT	49	99	51	47	4	0	92.2
CDR2-IMGT	100	120	21	17	4	0	81
FR3-IMGT	121	234	114	100	14	0	87.7
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	229	201	28	0	87.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  N  N  Y  M  S  W  V  R  Q  A  P  G  M  G  L  E  W  V  S  L  I  
                    Query_8828   14   GTGCAGCCTCTGGATTCACCTTCAGTAATAACTATATGAGTTGGGTCCGCCAGGCTCCAGGGATGGGGCTGGAGTGGGTCTCTCTTATTT  103
V  87.8% (201/229)  IGHV3-53*01  65   .............G......G......GC.....C.....C......................A..................AG......  154
                                         A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  

                                      --CDR2-IMGT-----><----------------------------------------------------FR3-IMGT------------
                                      Y  S  G  G  G  S  F  Y  T  H  S  V  E  G  R  F  T  I  S  R  D  D  Y  K  N  T  V  Y  L  Q  
                    Query_8828   104  ACAGCGGTGGTGGCTCCTTCTACACACACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACGATTACAAGAACACGGTTTATCTTCAAA  193
V  87.8% (201/229)  IGHV3-53*01  155  .T.........A..A.A.A....G..G........A..........................A...C..........C.G..........  244
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  

                                      ----------------------------------------><-------------CDR3-IMGT------------>             
                                      M  N  N  V  R  A  E  D  T  A  I  Y  Y  C  A  T  E  G  Q  R  S  R  T  L  D  Y  W  G  Q  G  
                    Query_8828   194  TGAACAATGTTAGAGCCGAGGACACGGCCATATATTACTGTGCGACAGAGGGCCAGAGAAGTAGGACCCTTGACTACTGGGGCCAGGGAA  283
V  87.8% (201/229)  IGHV3-53*01  245  ......GCC.G..................G.G.............G...-----------------------------------------  293
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                            
D  88.9% (8/9)      IGHD2-2*01   11   -----------------------------------------------------------.....T...----------------------  19
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------------------------.....................  27

                                                           
                                      T  L  V  I  V  S  S  
                    Query_8828   284  CCCTGGTCATCGTCTCCTCAG  304
J  97.6% (41/42)    IGHJ4*02     28   .........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_220756

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         313     2e-87
IGHD5-12*01                                                                                           21.8    0.042
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GAAGGTTAAGAC	GTGGATATAGCGGC	CAGCCTCCTGGAA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAAGGTTAAGACGTGGATATAGCGGCCAGCCTCCTGGAAGGTTCGACCCC	ARGRLRRGYSGQPPGRFDP	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  V  V  S  G  G  S  I  T  S  G  D  Y  S  W  S  W  I  R  L  P  P  G  K  G 
                    Query_8829     1    ACCCTGTCCCTCACCTGCGTTGTCTCTGGTGGCTCCATCACCAGCGGTGATTACTCCTGGAGCTGGATCCGGCTGCCTCCAGGGAAGGGC  90
V  90.0% (225/250)  IGHV4-30-2*01  49   ...................C....................G...T....G.......................A...A............  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  T  G  S  I  F  D  N  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S 
                    Query_8829     91   CTAGAGTGGACTGGGTCCATCTTTGATAATGGGCGCACCTACTACAATCCGTCCCTCAAGAGTCGAGTCACCATATCGCTGGACAAGTCC  180
V  90.0% (225/250)  IGHV4-30-2*01  139  ..G.......T.....A.....A.C...G....A.............C.............................AG.A....G....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                         R  N  H  F  S  L  E  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  L  R  R  G  Y 
                    Query_8829     181  AGGAACCACTTTTCCCTGGAACTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGCCAGAGGAAGGTTAAGACGTGGATAT  270
V  90.0% (225/250)  IGHV4-30-2*01  229  .A......G..C......A.G.....C................................C..........--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD5-12*01    1    ----------------------------------------------------------------------------------........  8

                                        3-IMGT----------------------->                                 
                                         S  G  Q  P  P  G  R  F  D  P  W  G  Q  G  T  L  V  I  V  S  S 
                    Query_8829     271  AGCGGCCAGCCTCCTGGAAGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCA  333
D  92.9% (13/14)    IGHD5-12*01    9    ..T...---------------------------------------------------------  14
J  97.7% (43/44)    IGHJ5*02       7    -------------------.................................C..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_203558

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           413     2e-117
IGHD3-22*01                                                                                           33.4    2e-05 
IGHJ3*01                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATACTTAGGGATCCC	TATTACTCTGATAGTAGTGG	CTCGCCCC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATACTTAGGGATCCCTATTACTCTGATAGTAGTGGCTCGCCCCATGCTTTTGATTTC	ARILRDPYYSDSSGSPHAFDF	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	276	12	0	95.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  T  S  V  K  V  S  C  K  V  S  G  Y  T  F  T  N  Y 
                    Query_8830   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGACCTCAGTGAAAGTCTCCTGCAAGGTTTCTGGTTACACCTTTACCAACTAC  91
V  95.8% (276/288)  IGHV1-18*04  7    .......................................G..........G.............C....................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  N  T  K  Y  A  Q 
                    Query_8830   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAAAATATGCACAG  181
V  95.8% (276/288)  IGHV1-18*04  97   ............................................................G...................C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  V  T  T  D  T  S  T  G  T  A  Y  M  E  L  R  T  L  K  S  D  D  T  A 
                    Query_8830   182  AAACTCCAGGGCAGAGTCACCGTGACCACAGACACATCCACGGGCACAGCCTACATGGAGCTGAGGACCTTGAAATCTGACGACACGGCC  271
V  95.8% (276/288)  IGHV1-18*04  187  ..G..................A....................A........................G.C...G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------------CDR3-IMGT-------------------------->               
                                       V  Y  Y  C  A  R  I  L  R  D  P  Y  Y  S  D  S  S  G  S  P  H  A  F  D  F  W  G  Q  G  T 
                    Query_8830   272  GTGTATTACTGTGCGAGAATACTTAGGGATCCCTATTACTCTGATAGTAGTGGCTCGCCCCATGCTTTTGATTTCTGGGGCCAAGGGACA  361
V  95.8% (276/288)  IGHV1-18*04  277  ..................------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  95.0% (19/20)    IGHD3-22*01  2    ---------------------------------.......A............-------------------------------------  21
J  95.8% (46/48)    IGHJ3*01     3    -------------------------------------------------------------...........G.................  31

                                                         
                                       T  V  T  V  S  S  
                    Query_8830   362  ACGGTCACCGTCTCTTCAG  380
J  95.8% (46/48)    IGHJ3*01     32   .T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_203559

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           367     6e-104
IGHD2-8*01                                                                                            41.1    7e-08 
IGHJ2*01                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD2-8*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	CGTACG	AGGATTTTGTACTAATGGTGTTTGCTTTAC	GGGG	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACCGTACGAGGATTTTGTACTAATGGTGTTTGCTTTACGGGGTGGTACTTCGATCTC	TTVRGFCTNGVCFTGWYFDL	249	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	112	2	0	98.2
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	244	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  N  N  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_8831   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACTTTCAATAATGCCTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (244/253)  IGHV3-15*01  47   .......T............G.....................G...C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  I  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_8831   91   AGTGGGTTGGTCGTATTAAAAGCAAAATTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  96.4% (244/253)  IGHV3-15*01  137  ..........C................C..............................................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  V  R  G  F  C  
                    Query_8831   181  ATTCAAAAAATACGCTCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACCGTACGAGGATTTTGTA  270
V  96.4% (244/253)  IGHV3-15*01  227  ..........C.....G........................................................-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  90.0% (27/30)    IGHD2-8*01   1    -------------------------------------------------------------------------------.....A.....  11

                                      ----CDR3-IMGT------------------------>                                  
                                      T  N  G  V  C  F  T  G  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8831   271  CTAATGGTGTTTGCTTTACGGGGTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  342
D  90.0% (27/30)    IGHD2-8*01   12   ..........A....A...-----------------------------------------------------  30
J  100.0% (49/49)   IGHJ2*01     5    -----------------------.................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_203552

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           452     3e-129
IGHD6-13*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAC	ATAGCAGCAGCTGGT	CGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTAC	ARSHSSSWSGFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	289	0	0	100


Alignments

                                       <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                     Query_8832   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  100.0% (289/289)  IGHV5-51*03  6    ..........................................................................................  95
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                       ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                         W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                     Query_8832   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  100.0% (289/289)  IGHV5-51*03  96   ..........................................................................................  185
                                         W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                       ------------------------------------------FR3-IMGT----------------------------------------
                                         S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                     Query_8832   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  100.0% (289/289)  IGHV5-51*03  186  ..........................................................................................  275
                                         S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                       ------------><--------------CDR3-IMGT-------------->                                  
                                         M  Y  Y  C  A  R  S  H  S  S  S  W  S  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_8832   271  CATGTATTACTGTGCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  100.0% (289/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                         M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)    IGHD6-13*01  5    -----------------------...............------------------------------------------------  19
J  100.0% (44/44)    IGHJ4*02     5    ------------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_203550

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           333     1e-93
IGHD1-26*01                                                                                           12.2    35   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTCTGGATCTCT	TGGGAG	GCGGCAG	TGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCTGGATCTCTTGGGAGGCGGCAGTGACGAC	ATLDLLGGGSDD	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	43	8	0	84.3
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	250	37	0	87.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  T  S  R  A  T  F  S  S  N
                    Query_8833   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACTTCCAGAGCCACTTTCAGCAGCAA  90
V  87.1% (250/287)  IGHV1-69*06  6    ................................................................G....TG...G...C.........T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        T  F  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  A  I  I  P  T  L  R  T  T  Y  Y  A  Q
                    Query_8833   91   CACCTTCACTTGGGTGCGCCAGGCCCCGGGACAAGGGCTTGAGTGGATGGGGGCCATCATCCCCACCCTGCGAACAACATACTACGCACA  180
V  87.1% (250/287)  IGHV1-69*06  96   TG.TA...GC........A........T.......................A.GG........T.T.T.TG.T...G..A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  H  G  R  V  T  I  T  A  D  R  S  T  S  T  T  Y  M  E  L  S  G  L  T  S  E  D  A  A
                    Query_8833   181  GAAGTTCCATGGCAGAGTCACCATTACCGCGGACAGATCTACGAGCACAACCTATATGGAACTGAGCGGTCTGACCTCTGAGGACGCGGC  270
V  87.1% (250/287)  IGHV1-69*06  186  .........G...........G.............A...C.........G....C.....G......A.C....GA.........A....  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  T  L  D  L  L  G  G  G  S  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8833   271  CGTGTATTACTGTGCGACTCTGGATCTCTTGGGAGGCGGCAGTGACGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  87.1% (250/287)  IGHV1-69*06  276  .................------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                    
D  100.0% (6/6)     IGHD1-26*01  8    -----------------------------......------------------------------------------------  13
J  97.6% (40/41)    IGHJ4*02     8    ------------------------------------------....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_203551

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           360     1e-101
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGGTCC	ATTACTATGATAGTA	CTTCTTACTACGGGAGTCGGTTCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGGTCCATTACTATGATAGTACTTCTTACTACGGGAGTCGGTTCCACTTTGACTAC	ARVVHYYDSTSYYGSRFHFDY	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G 
                    Query_8834   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGA  90
V  96.4% (239/248)  IGHV4-61*01  49   .........................................C........................A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_8834   91   CTGGAGTGGATTGGGTACATCTATTACAGAGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTGGACACGTCC  180
V  96.4% (239/248)  IGHV4-61*01  139  .................T...........T....G.......................................A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  V  H  Y  Y  D  S 
                    Query_8834   181  AAGAACCAGTTCTCCCTGCAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGGTGGTCCATTACTATGATAGT  270
V  96.4% (239/248)  IGHV4-61*01  229  ..................A..C..............................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (15/15)   IGHD3-22*01  3    ----------------------------------------------------------------------------..............  16

                                      CDR3-IMGT-------------------------->                                  
                                       T  S  Y  Y  G  S  R  F  H  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_8834   271  ACTTCTTACTACGGGAGTCGGTTCCACTTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  340
D  100.0% (15/15)   IGHD3-22*01  17   .---------------------------------------------------------------------  17
J  97.8% (44/45)    IGHJ4*02     4    -------------------------.......................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_203556

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           380     1e-107
IGHD2-21*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GAGG	TGTGGTGG	GCGCCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGGAGGTGTGGTGGGCGCCCCCTTTGACTCC	AGGGVVGAPFDS	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	18	6	0	75
FR3-IMGT	175	288	114	102	12	0	89.5
CDR3-IMGT (germline)	289	295	7	6	1	0	85.7
Total	N/A	N/A	295	269	26	0	91.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  T  S  G  G  S  F  T 
                    Query_8835   1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACTTCTGGAGGCAGTTTCACC  90
V  91.2% (269/295)  IGHV1-69*06  1    ...G...................G.............................................G............CC....G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  M  P  L  F  D  I  A  N  Y 
                    Query_8835   91   AGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGAATCATGCCTCTGTTTGACATAGCAAACTAC  180
V  91.2% (269/295)  IGHV1-69*06  91   ...........................................................G.....C...A.C....GT.C..........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       G  Q  K  F  Q  G  R  V  T  I  T  A  D  K  F  T  R  T  A  Y  M  E  L  N  S  L  R  S  G  D 
                    Query_8835   181  GGACAGAAGTTCCAGGGCAGAGTCACCATTACCGCGGACAAGTTCACGAGGACAGCCTACATGGAGTTGAATAGCCTGAGATCTGGGGAC  270
V  91.2% (269/295)  IGHV1-69*06  181  .C........................G..............A.C......C...............C...GC.............A....  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       P  A  I  Y  Y  C  A  G  G  G  V  V  G  A  P  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8835   271  CCGGCCATTTATTACTGTGCGGGAGGAGGTGTGGTGGGCGCCCCCTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  91.2% (269/295)  IGHV1-69*06  271  A.....G.G............A...---------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD2-21*01  8    -----------------------------........---------------------------------------------------  15
J  97.7% (43/44)    IGHJ4*02     5    --------------------------------------------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_203557

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           445     2e-127
IGHD3-3*01                                                                                            41.1    8e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACGCCT	CGATTTTTGGAGTGGTTATTGTAC	GAGAATCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTAC	ARYASIFGVVIVRESFDY	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	287	2	0	99.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_8836   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  99.3% (287/289)  IGHV5-51*01  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_8836   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACTAGATACAGCCC  180
V  99.3% (287/289)  IGHV5-51*01  96   ............................................................T.................C...........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8836   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  99.3% (287/289)  IGHV5-51*01  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  Y  A  S  I  F  G  V  V  I  V  R  E  S  F  D  Y  W  G  Q  G  T  L  V  T
                    Query_8836   271  CATGTATTACTGTGCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTACTGGGGCCAGGGAACCCTGGTCAC  360
V  99.3% (287/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  95.8% (23/24)    IGHD3-3*01   7    --------------------------....................A...----------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    ----------------------------------------------------------................................  37

                                                 
                                        V  S  S  
                    Query_8836   361  CGTCTCCTCAG  371
J  100.0% (43/43)   IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_203555

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           433     1e-123
IGHD3-16*01                                                                                           12.2    35    
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTTGAGG	GATTAC	CAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTAC	ARSLRDYQPFYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_8837   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  97.9% (283/289)  IGHV5-51*03  6    .............................................................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  T  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_8837   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCACCTATCCTGGTGACTCGGATACCAGATACAGCCC  180
V  97.9% (283/289)  IGHV5-51*03  96   ........................................................T...............T.................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8837   181  GTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACTGC  270
V  97.9% (283/289)  IGHV5-51*03  186  ......................A................................................................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  S  L  R  D  Y  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_8837   271  CATGTATTACTGTGCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  359
V  97.9% (283/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  8    ----------------------------......-------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ------------------------------------------....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_206179

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGATGGCCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTC	VRQSSDGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  S  Y
                    Query_8838   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCAGTTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ....................................C.......................................AG.........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  T  G  L  E  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  S  P
                    Query_8838   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGTGGATGGGGATCATCTTTCCGGATGACTCTGATACCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ................................A..........................A...T.G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  G  T  A
                    Query_8838   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGGCACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  ............................................G.....................C................A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                           
                                        K  Y  Y  C  V  R  Q  S  S  D  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_8838   271  CAAGTATTATTGTGTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  355
V  95.2% (277/291)  IGHV5-51*01  276  ..T......C....C......----------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                   
J  100.0% (42/42)   IGHJ6*02     15   -------------------------------------------..........................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_300532

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           392     2e-111
IGHD5-18*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCCTTGTTGGCCTTGCA	GTGGATAC	TATTTTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCCTTGTTGGCCTTGCAGTGGATACTATTTTCTGACTAT	ARAPLLALQWILFSDY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  S  S  I  S  S  Y 
                    Query_8839   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTCTTCCATTAGCAGTTAT  91
V  93.4% (270/289)  IGHV1-18*01  7    .........................................................................ACA..T...C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  A  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  T  A  Y  N  G  K  T  N  Y  A  Q 
                    Query_8839   92   GGAGTCGCCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCACCGCTTATAATGGTAAAACAAACTATGCACAG  181
V  93.4% (270/289)  IGHV1-18*01  97   ..TA..AG...........................G......................G......C........C...............  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_8839   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  93.4% (270/289)  IGHV1-18*01  187  ...C........................................................C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       I  Y  Y  C  A  R  A  P  L  L  A  L  Q  W  I  L  F  S  D  Y  W  G  Q  G  T  P  V  T  V  S 
                    Query_8839   272  ATTTATTATTGTGCGAGAGCCCCCTTGTTGGCCTTGCAGTGGATACTATTTTCTGACTATTGGGGCCAGGGAACCCCGGTCACCGTCTCC  361
V  93.4% (270/289)  IGHV1-18*01  277  G.G.....C..........-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (8/8)     IGHD5-18*01  1    --------------------------------------........--------------------------------------------  8
J  95.1% (39/41)    IGHJ4*02     8    -----------------------------------------------------......C................T.............  44

                                          
                                       S  
                    Query_8839   362  TCAG  365
J  95.1% (39/41)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_320117

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           353     1e-99
IGHD2-8*01                                                                                            29.5    2e-04
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGACA	A	ATATGGAACTAATGGTGTATG	AGGATGAAA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGACAAATATGGAACTAATGGTGTATGAGGATGAAAACTTCTACGGTATGGACGTC	TTNMELMVYEDENFYGMDV	249	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	240	14	0	94.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8840   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAAGGCCTGGATGAGCTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  94.5% (240/254)  IGHV3-15*01  47   .......T......................................C.............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  Q  T  D  G  G  T  T  D  Y  G  T  P  V  K  G  R  F  T  I  S  R  D  
                    Query_8840   91   AGTGGGTTGGCCGTATTAAAAGTCAAACTGATGGTGGGACAACAGACTACGGAACACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  94.5% (240/254)  IGHV3-15*01  137  ......................CA...........................CTG....................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  H  T  V  Y  L  Q  M  S  S  L  K  T  E  D  T  A  L  Y  Y  C  T  T  N  M  E  L  M  
                    Query_8840   181  ATTCAAAACACACGGTGTATCTGCAAATGAGCAGCCTGAAAACCGAGGACACAGCCTTGTATTATTGTACGACAAATATGGAACTAATGG  270
V  94.5% (240/254)  IGHV3-15*01  227  ........A.....C...............A.........................G.......C.....C...----------------  300
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  90.5% (19/21)    IGHD2-8*01   4    ---------------------------------------------------------------------------....T.T........  18

                                      --CDR3-IMGT----------------------->                                 
                                      V  Y  E  D  E  N  F  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8840   271  TGTATGAGGATGAAAACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  338
D  90.5% (19/21)    IGHD2-8*01   19   ......--------------------------------------------------------------  24
J  98.1% (52/53)    IGHJ6*02     10   ---------------...A.................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_300530

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD3-16*01                                                                                           21.8    0.039
IGHJ2*01                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCT	GGGAGTTATGC	CGAT	TTCAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTGGGAGTTATGCCGATTTCAATATC	AAGSYADFNI	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  R  S  Y  D  M  I  W  V  R  Q  A  P  G  K  G  L  
                    Query_8841   1    GGTCCCTGAGACTCTCCTGTGCAGTTTCCGGATTCACCTTTAGAAGCTATGACATGATTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (228/245)  IGHV3-23*01  47   ........................CC..T..............C.......C.....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  A  S  A  I  S  G  N  G  G  S  S  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8841   91   AGTGGGCCTCAGCTATTAGTGGAAATGGTGGTAGTTCATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (228/245)  IGHV3-23*01  137  ......T...............T.G.........CA......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  Y  I  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  A  G  S  Y  A  D  F  N  
                    Query_8841   181  AGTACATTCTGTATTTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTATATTACTGTGCGGCTGGGAGTTATGCCGATTTCAATA  270
V  93.1% (228/245)  IGHV3-23*01  227  ..A...CG......C.....................C............................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD3-16*01  20   --------------------------------------------------------------------...........-----------  30
J  88.4% (38/43)    IGHJ2*01     11   -----------------------------------------------------------------------------------...G..C  17

                                      ->                                  
                                      I  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8841   271  TCTGGGGCCGGGGCACGTTGGTCACTGTCTCCTCAG  306
J  88.4% (38/43)    IGHJ2*01     18   ..........T.....CC..................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_300536

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           385     4e-109
IGHD3-10*01                                                                                           18.0    0.59  
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTAT	CAATTAGACT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATCAATTAGACTACTACTTTGACTAC	ARGLYYYQLDYYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	248	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8842   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  99.2% (248/250)  IGHV4-31*03  49   .........................................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  C  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8842   91   CTGGAGTGGATTGGGTACATCTATTGCAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  99.2% (248/250)  IGHV4-31*03  139  .........................A................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  Q  L 
                    Query_8842   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCTCTATTACTATCAATTA  270
V  99.2% (248/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-10*01  2    ---------------------------------------------------------------------------.........------  10

                                      ----------------->                                  
                                       D  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8842   271  GACTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  100.0% (48/48)   IGHJ4*02     1    ----................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_300537

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8843   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_8843   91   CTCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..G...............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G 
                    Query_8843   181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .........................G................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8843   271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_300534

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           299     2e-83
IGHD5-12*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAGA	TGGCTACAATTAC	AGTCAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGATGGCTACAATTACAGTCAGGACTAC	ARLDGYNYSQDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	217	26	0	89.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  K  G  G  S  F  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_8844   1    ACCCTGTCCCTCACCTGCGCTGTCAAAGGTGGGTCCTTCAATCATTTCTACTGGAGTTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  89.3% (217/243)  IGHV4-34*01  49   ........................T.T.............G.GG..A.........C............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  K  Y  N  P  P  L  E  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_8844   91   TGGATTGGCGAAATCAATCACAGTGGACGCACCAAGTACAACCCGCCCCTCGAGAGTCGAGTCACCATCTCATTGGACACCTCCAAAAAC  180
V  89.3% (217/243)  IGHV4-34*01  139  ........G...........T......A.......C.........T.....A................A...G.A.....G.....G...  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  K  L  K  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  D  G  Y  N  Y  S  Q  D 
                    Query_8844   181  CACTTCTCCCTGAAACTGAAGTCTGTCACCGCCGCGGACACGGCTCTTTATTACTGTGCGAGACTAGATGGCTACAATTACAGTCAGGAC  270
V  89.3% (217/243)  IGHV4-34*01  229  ..G...........G....GC.....G..................G.G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.3% (12/13)    IGHD5-12*01  11   --------------------------------------------------------------------.......G.....---------  23
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       Y  W  G  K  G  T  L  V  T  V  S  S  
                    Query_8844   271  TACTGGGGCAAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   .........C...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_300535

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           285     4e-79
IGHD2-15*01                                                                                           21.8    0.042
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	GGATATTGTAATGG	GACCCTCTGCCACACTGGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGATATTGTAATGGGACCCTCTGCCACACTGGGGCTTTTGATTTC	ARDGYCNGTLCHTGAFDF	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	42	9	0	82.4
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	216	34	0	86.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  D  S  G  F  T  F  S  N  F  S  M  S  W  V  R  L  S  P  G  K  G  L  
                    Query_8845   1    GGTCCCTGAGACTCTCCTGTACAGACTCTGGATTCACCTTTAGCAACTTTTCCATGAGTTGGGTCCGGCTGTCTCCAGGAAAGGGACTGG  90
V  86.4% (216/250)  IGHV3-23*01  47   ....................G...C....................G..A.G.......C........C.A.G.......G.....G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  A  S  G  R  R  P  Y  Y  A  D  S  A  K  G  R  F  S  V  L  R  D  N  S  
                    Query_8845   91   AGTGGGTTTCAAGTATCACTGCTAGCGGTCGTCGTCCATACTACGCAGACTCCGCGAAGGGCCGATTCTCCGTTCTCAGAGACAATTCCA  180
V  86.4% (216/250)  IGHV3-23*01  137  .......C...GC...T.G..G...T...G..A.CA..................T.........G...A..A.CTC..............  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  G  Y  C  N  G  T  
                    Query_8845   181  AGAACACTCTTTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTCTATTACTGTGCGAGAGACGGATATTGTAATGGGACCC  270
V  86.4% (216/250)  IGHV3-23*01  227  .......G..G.........................C...............A.............A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD2-15*01  2    -----------------------------------------------------------------------..........G...-----  15

                                      IMGT--------------------->                                  
                                      L  C  H  T  G  A  F  D  F  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_8845   271  TCTGCCACACTGGGGCTTTTGATTTCTGGGGCCAAGGGACAGTGGTCACCGTCTCCTCAG  330
J  93.5% (43/46)    IGHJ3*01     5    --------------.........G.................A.............T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_300538

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         346     2e-97
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ACACT	CTATGACAGTAGTGGTTATT	CCCTTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACACTCTATGACAGTAGTGGTTATTCCCTTAACTACTTTGACTAC	ARTLYDSSGYSLNYFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  A  I  N  S  G  G  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_8846     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCGCCATCAACAGTGGTGGTCACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  94.4% (235/249)  IGHV4-30-4*01  49   ..................A..............T......G........A.T......................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  D  I  Y  Y  N  G  R  T  Y  Y  H  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8846     91   CTGGAGTGGATTGGGGACATCTATTACAATGGGAGAACCTACTACCACCCGTCCCTCAAGAGTCGAGTAACCATATCAGTAGACACGTCC  180
V  94.4% (235/249)  IGHV4-30-4*01  139  ...............T............G......C.........A......................T.....................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  L  Y  D  S  S  G 
                    Query_8846     181  AAGAACCAGTTCTCCCTGAAGGTGAACTCTGTGACTGCCGCTGACACGGCCGTGTATTATTGTGCCAGAACACTCTATGACAGTAGTGGT  270
V  94.4% (235/249)  IGHV4-30-4*01  229  .....................C...G...............A.................C.........---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-22*01    7    --------------------------------------------------------------------------......T.........  22

                                        MGT-------------------->                                  
                                         Y  S  L  N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8846     271  TATTCCCTTAACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.0% (19/20)    IGHD3-22*01    23   ....------------------------------------------------------  26
J  100.0% (48/48)   IGHJ4*02       1    ----------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_300539

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGTACCA	N/A	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGTACCAACTGCTACTACCAAATGGACGTC	ARVDCSSTNCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_8847   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.0% (222/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_8847   91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.0% (222/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  N  C  Y 
                    Query_8847   181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTATTGTGCGAGAGTGGACTGTAGTAGTACCAACTGCTAC  270
V  91.0% (222/244)  IGHV4-59*01  229  C..............................CT..............G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD2-2*01   8    ---------------------------------------------------------------------.............--------  20
J  89.3% (50/56)    IGHJ6*02     7    ----------------------------------------------------------------------------------...A....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  T  V  I  V  S  S 
                    Query_8847   271  TACCAAATGGACGTCTGGGGCCTAGGGACCACGGTCATCGTCTCCTCA  318
J  89.3% (50/56)    IGHJ6*02     15   ...GGT................A..............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_245970

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           353     9e-100
IGHD6-19*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGGA	AGCAGTGG	N/A	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGGAAGCAGTGGCTATTACCACGGTATGGACGTC	ARSGSSGYYHGMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8848   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGGAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (237/248)  IGHV3-33*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  T  N  E  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  E  N  S  
                    Query_8848   91   AGTGGGTGGCCGTTATATGGTATGATGGAACTAATGAACATTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGAGAATTCCA  180
V  95.6% (237/248)  IGHV3-33*01  137  ..........A...................G....A..T.C....C....................................C.......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  S  G  S  S  G  Y  Y  
                    Query_8848   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGATCGGGAAGCAGTGGCTATTACC  270
V  95.6% (237/248)  IGHV3-33*01  227  ....................................C...............G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  7    --------------------------------------------------------------------------........--------  14
J  96.4% (53/55)    IGHJ6*02     8    ----------------------------------------------------------------------------------...C...T  15

                                      ------------->                                 
                                      H  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8848   271  ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  96.4% (53/55)    IGHJ6*02     16   ...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_245971

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     2e-87
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGCCGG	AGTAGTGGTTATTACT	CTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGCCGGAGTAGTGGTTATTACTCTTACTACTTTGACTAC	ARGRRSSGYYSYYFDY	250	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	135	33	20	1	12	60.6
FR3-IMGT	136	249	114	106	8	0	93
CDR3-IMGT (germline)	250	256	7	7	0	0	100
Total	N/A	N/A	256	230	14	12	89.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  I  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8849   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCATCACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  89.8% (230/256)  IGHV4-59*01  49   ...............................G........GT.G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----------CDR2-IMGT-----------><--------------------------------------------
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  F  N  T  N  Y  N  P  S  L  K  S  R  V  A  I  S  L  D 
                    Query_8849   91   TGGATTGGCTATATTTATTACAGTGGGAGCACCAACTTCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCGCCATTTCACTAGAC  180
V  89.8% (230/256)  IGHV4-59*01  139  ........G.....C..............------------..................................A....A...G.....  216
                                       W  I  G  Y  I  Y  Y  S  G  S              T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-------------------C
                                       T  S  K  S  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  S  S 
                    Query_8849   181  ACGTCCAAGAGCCAGTTCTCCCTGAGACTGAGTTCGGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGTCGCCGGAGTAGT  270
V  89.8% (230/256)  IGHV4-59*01  217  ..........A..............AG.....C..T........................................--------------  292
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  100.0% (16/16)   IGHD3-22*01  14   ------------------------------------------------------------------------------------......  19

                                      DR3-IMGT------------------>                                  
                                       G  Y  Y  S  Y  Y  F  D  Y  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_8849   271  GGTTATTACTCTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  331
D  100.0% (16/16)   IGHD3-22*01  20   ..........---------------------------------------------------  29
J  97.9% (47/48)    IGHJ4*02     1    -------------...................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_245976

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            319     2e-89
IGHD1-7*01                                                                                            16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGCGA	CCGA	GGAACTAC	CAGGATGTTCGAGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGACCGAGGAACTACCAGGATGTTCGAGAATGCTCTTGATATC	AGDRGTTRMFENALDI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	248	8	6	2	0	75
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  G  V  S  G  G  A  I  S  S  S  H  W  W  N  W  V  R  Q  A  P  G  K  G  L 
                    Query_8850  1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGCGGCGCCATCAGCAGCAGTCACTGGTGGAATTGGGTCCGCCAGGCCCCCGGGAAGGGGCTG  90
V  91.1% (226/248)  IGHV4-4*02  49   ...................C.........T...T..........T...A.........G.............C....A............  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  Q  I  Y  H  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S  K 
                    Query_8850  91   GAGTGGATTGGGCAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAGGAGTCGAGTCAGCATCTCAATAGACACGTCCAAG  180
V  91.1% (226/248)  IGHV4-4*02  139  ............G..........................................A...........C...A...G......A.......  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                      H  Q  F  A  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  D  R  G  T  T  R  M  F 
                    Query_8850  181  CACCAGTTCGCCCTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGCGGGCGACCGAGGAACTACCAGGATGTTC  270
V  91.1% (226/248)  IGHV4-4*02  229  A........T........C...G...........................G.....C......A.A..----------------------  296
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD1-7*01  10   ------------------------------------------------------------------------........----------  17

                                     ----------------->                                  
                                      E  N  A  L  D  I  W  G  Q  G  T  T  V  I  V  S  S  
                    Query_8850  271  GAGAATGCTCTTGATATCTGGGGCCAAGGGACAACGGTCATCGTCTCTTCAG  322
J  93.8% (45/48)    IGHJ3*02    3    ----.....T........................T.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_57018

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     3e-93
IGHD2-21*02                                                                                           31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCGT	GCATTTTGTGGTGATGACTGCT	TCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGTGCATTTTGTGGTGATGACTGCTTCCCCTTTGACTAC	ARRAFCGDDCFPFDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	227	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  F  N  I  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8851   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCTTCAACATTTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.8% (227/242)  IGHV4-59*08  49   ....................................A...GT.G............C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  T  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  S  S  K  N 
                    Query_8851   91   TGGATTGGGTATATCTCTTACAGTGGGACCACCAACTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGTAGACTCGTCCAAGAAT  180
V  93.8% (227/242)  IGHV4-59*08  139  ................A...........G......................A..........................A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  V  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  R  A  F  C  G  D  D  C  F 
                    Query_8851   181  CAGGTCTCCCTGAAACTGACCTCTGTGACCGCCGCAGACACGGCCATATATTACTGTGCGAGGCGTGCATTTTGTGGTGATGACTGCTTC  270
V  93.8% (227/242)  IGHV4-59*08  229  ...T..........G....G.........................G.G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (20/22)    IGHD2-21*02  2    ------------------------------------------------------------------....A........G........--  23

                                      ----------->                                  
                                       P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8851   271  CCCTTTGACTACTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  316
J  97.7% (43/44)    IGHJ4*02     5    --..............................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_245975

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_8852   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AGT.A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S 
                    Query_8852   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T.A....A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_8852   181  CAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ..............G.....C..................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8852   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_57015

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           397     8e-113
IGHD1-1*01                                                                                            18.0    0.65  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GTC	TACAACTGG	CGGGAGGGGGCGTTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTCTACAACTGGCGGGAGGGGGCGTTCACTAC	GLQLAGGGVHY	290	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	70	4	0	94.6
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	106	8	0	93
CDR3-IMGT (germline)	290	290	1	1	0	0	100
Total	N/A	N/A	288	271	17	0	94.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  
                    Query_8853   3    AGGTCCAGCTGGTACAGTCTGGAGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGCA  92
V  94.1% (271/288)  IGHV3-33*01  2    ....G........GG.......G.................................................................T.  91
                                         V  Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  I  I  W  Y  D  G  S  N  K  H  Y  
                    Query_8853   93   ATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAATTATATGGTATGATGGAAGTAACAAACACTATG  182
V  94.1% (271/288)  IGHV3-33*01  92   GC......................................................G......................T...T......  181
                                      S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  
                    Query_8853   183  CAGACTCCGTCCAGGGCCGATTCACCATATCCAGAGACAATTCCAAGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACA  272
V  94.1% (271/288)  IGHV3-33*01  182  ..........GA................C........................C...........................C...G....  271
                                      A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  

                                      ----------------><-----------CDR3-IMGT----------->                                  
                                      T  A  V  Y  Y  C  G  L  Q  L  A  G  G  G  V  H  Y  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_8853   273  CGGCTGTATATTACTGTGGTCTACAACTGGCGGGAGGGGGCGTTCACTACAGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  94.1% (271/288)  IGHV3-33*01  272  .......G..........------------------------------------------------------------------  289
                                      T  A  V  Y  Y  C                                                                    
D  100.0% (9/9)     IGHD1-1*01   3    ---------------------.........------------------------------------------------------  11
J  97.4% (38/39)    IGHJ4*02     10   ---------------------------------------------.....T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_57014

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         336     1e-94
IGHD3-10*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGCTCGGC	GGTTCGGGGAGTTA	CC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTCGGCGGTTCGGGGAGTTACCACTAC	ARGLGGSGSYHY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  V  S  G  V  A  F  S  S  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8854     1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGAGTCGCCTTCAGCAGCTATGCTATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-30-3*01  47   ........................C.......T..A.......T...........G..................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  L  I  S  H  D  G  S  S  K  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8854     91   AGTGGGTGGCACTTATATCACATGATGGAAGCAGTAAATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-30-3*01  137  ...........G........T............A........A...............................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                        K  N  T  V  Y  L  Q  M  N  S  L  R  N  E  D  T  A  V  Y  Y  C  A  R  G  L  G  G  S  G  S  
                    Query_8854     181  AGAACACGGTATATCTACAGATGAACAGCCTGAGAAATGAGGACACGGCTGTTTATTACTGTGCGAGGGGGCTCGGCGGTTCGGGGAGTT  270
V  93.5% (231/247)  IGHV3-30-3*01  227  ........C.G.....G..A...............GC...............G..............-----------------------  293
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (14/14)   IGHD3-10*01    11   -----------------------------------------------------------------------------.............  23

                                        ------->                                
                                        Y  H  Y  W  G  Q  G  T  L  V  A  V  S  S
                    Query_8854     271  ACCACTACTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  310
D  100.0% (14/14)   IGHD3-10*01    24   .---------------------------------------  24
J  97.3% (36/37)    IGHJ4*02       10   ---..........................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_57017

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           355     3e-100
IGHD3-10*01                                                                                           19.9    0.16  
IGHJ5*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GAGGAGTCGCGGCGTCACCTTC	TACTTTGGTTTGGGGA	CTTCTGGAGGA	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAGGAGTCGCGGCGTCACCTTCTACTTTGGTTTGGGGACTTCTGGAGGATGGTTCGACCCC	ARGRSRGVTFYFGLGTSGGWFDP	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8855   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGCTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  96.3% (236/245)  IGHV4-34*01  49   ...........................................G............C.................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       R  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8855   91   CGGATTGGCGAAATCAATCATAGTGGCAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCTGTAGACACGTCCAAGAAC  180
V  96.3% (236/245)  IGHV4-34*01  139  T.......G.................A............................................A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  G  R  S  R  G  V  T  F  Y 
                    Query_8855   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACTCGGCTGTGTATTACTGTGCGAGAGGGAGGAGTCGCGGCGTCACCTTCTAC  270
V  96.3% (236/245)  IGHV4-34*01  229  ...................G...............G...A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  87.5% (14/16)    IGHD3-10*01  5    ---------------------------------------------------------------------------------------...  7

                                      3-IMGT----------------------------->                                  
                                       F  G  L  G  T  S  G  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8855   271  TTTGGTTTGGGGACTTCTGGAGGATGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  87.5% (14/16)    IGHD3-10*01  8    .A.....C.....---------------------------------------------------------  20
J  100.0% (46/46)   IGHJ5*02     6    ------------------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_57016

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           307     1e-85
IGHD3-10*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	AGACCAAGG	GGTTCGGGGACTTA	CTGCAGCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGACCAAGGGGTTCGGGGACTTACTGCAGCCCTTTGACCAC	VKTKGFGDLLQPFDH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	221	25	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  T  S  G  F  T  L  T  S  S  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8856   1    GGTCCCTGAGACTCTCCTGTGAAACCTCTGGATTCACCTTGACTAGTTCCACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.8% (221/246)  IGHV3-21*01  47   .....................C.G................C.G...C.AT.G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  T  S  G  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_8856   91   AGTGGGTCGCATCTATTACTAGTGGAAGTACTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  89.8% (221/246)  IGHV3-21*01  137  ........T....C....G....A.T....G........................................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  L  S  G  L  R  V  E  D  T  A  V  Y  S  C  V  K  T  K  G  F  G  D  L  
                    Query_8856   181  AGAACTCACTGTTTCTGCAACTGAGTGGCCTGAGAGTCGAGGACACGGCAGTCTATTCCTGTGTGAAGACCAAGGGGTTCGGGGACTTAC  270
V  89.8% (221/246)  IGHV3-21*01  227  ............A.......A...ACA.........C............T..G....A.....C..------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD3-10*01  11   ---------------------------------------------------------------------------..........G...-  24

                                      ---------------->                                  
                                      L  Q  P  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8856   271  TGCAGCCCTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.7% (43/44)    IGHJ4*02     5    -------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_57011

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         268     6e-74
IGHD5-12*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGACGG	TACGATTA	TTACCG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGACGGTACGATTATTACCGCGGTATGGACGTC	ARERRYDYYRGMDV	258	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	68	39	19	5	15	48.7
FR2-IMGT	69	119	51	47	4	0	92.2
CDR2-IMGT	120	143	24	19	5	0	79.2
FR3-IMGT	144	257	114	101	13	0	88.6
CDR3-IMGT (germline)	258	265	8	8	0	0	100
Total	N/A	N/A	265	220	30	15	83


Alignments

                                        <---------FR1-IMGT----------><--------------CDR1-IMGT--------------><--------------------F
                                           S  L  R  L  S  C  V  G  S  G  F  N  S  S  G  Y  D  F  S  R  Y  D  M  H  W  V  R  Q  A  
                    Query_8857     1    GGTCCCTGAGACTCTCTTGTGTAGGCTCTGGATTCAACTCCAGTGGATATGACTTTAGTAGATATGACATGCACTGGGTCCGACAGGCTC  90
V  83.0% (220/265)  IGHV3-30-3*01  47   ................C....C..C...........C..T....---------------..C....CT..............C.......  121
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S                 S  Y  A  M  H  W  V  R  Q  A  

                                        R2-IMGT---------------------><-------CDR2-IMGT------><------------------------------------
                                        P  G  Q  G  L  E  W  V  A  S  I  S  E  D  G  G  S  K  N  F  A  G  A  V  G  G  R  F  T  V  
                    Query_8857     91   CAGGCCAGGGGCTGGAGTGGGTGGCAAGTATTTCAGAGGATGGAGGCAGTAAAAACTTCGCAGGCGCCGTGGGGGGCCGATTCACCGTCT  180
V  83.0% (220/265)  IGHV3-30-3*01  122  .....A....................GT...A...T.T......A...A....T...A.....A.T.....AA.............A...  211
                                        P  G  K  G  L  E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  

                                        ----------------FR3-IMGT----------------------------------------------------><------------
                                        S  R  D  N  S  K  N  T  H  Y  L  Q  M  N  S  L  R  G  D  D  T  A  V  Y  Y  C  A  R  E  R  
                    Query_8857     181  CCAGAGACAATTCCAAGAACACACATTATCTGCAAATGAACAGCCTGAGAGGTGACGACACCGCTGTGTATTACTGTGCGAGAGAAAGAC  270
V  83.0% (220/265)  IGHV3-30-3*01  212  ......................G.TG.........................C...G.....G.......................-----  296
                                        S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R        

                                        ----CDR3-IMGT--------------->                                 
                                        R  Y  D  Y  Y  R  G  M  D  V  W  G  Q  G  A  T  V  I  V  S  S 
                    Query_8857     271  GGTACGATTATTACCGCGGTATGGACGTCTGGGGCCAAGGGGCCACGGTCATTGTCTCCTCA  332
D  100.0% (8/8)     IGHD5-12*01    15   --........----------------------------------------------------  22
J  93.5% (43/46)    IGHJ6*02       17   ----------------.........................A.........CC.........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_57010

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD2-21*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGGGGG	ATTGTGATGGT	ATTAACTGCTTCCCCTGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGGATTGTGATGGTATTAACTGCTTCCCCTGGTACTACTATTATGGAATGCACGTC	AKGDCDGINCFPWYYYYGMHV	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	221	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  L  Y  G  G  S  F  S  G  H  Y  W  I  W  L  R  Q  S  P  G  K  G  L  E 
                    Query_8858   1    ACCCTGTCCCTCACCTGCGCTCTCTATGGTGGGTCCTTCAGTGGTCACTACTGGATTTGGCTCCGCCAGTCCCCCGGGAAGGGGCTGGAG  90
V  91.7% (221/241)  IGHV4-34*01  49   .....................G.......................T.........GC...A........C....A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  K  Y  N  S  S  L  K  S  R  V  A  M  S  I  D  A  S  K  S 
                    Query_8858   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACGAAGTACAACTCGTCCCTCAAGAGTCGAGTCGCCATGTCAATAGACGCGTCCAAGAGT  180
V  91.7% (221/241)  IGHV4-34*01  139  ................................C..C......C....................A....A...G.....A.........AC  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  Y  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  G  D  C  D  G  I  N  C  F 
                    Query_8858   181  CAATTCTACCTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAAGGGGGATTGTGATGGTATTAACTGCTTC  270
V  91.7% (221/241)  IGHV4-34*01  229  ..G....C...........G...........................G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (10/11)    IGHD2-21*01  6    -------------------------------------------------------------------......G....------------  16

                                      MGT-------------------------->                                 
                                       P  W  Y  Y  Y  Y  G  M  H  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_8858   271  CCCTGGTACTACTATTATGGAATGCACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  333
J  91.2% (52/57)    IGHJ6*02     6    ------........C..C..T...G...........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_57013

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            383     1e-108
IGHD3-10*01                                                                                           14.1    8.7   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TCGGGGA	CTCCTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATCGGGGACTCCTGTTTGACTTC	ARDRGLLFDF	269	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	40	5	0	88.9
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	154	27	26	1	0	96.3
FR3-IMGT	155	268	114	107	7	0	93.9
CDR3-IMGT (germline)	269	276	8	8	0	0	100
Total	N/A	N/A	275	260	15	0	94.5


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  A  K  P  T  Q  T  L  S  L  T  C  G  I  S  G  D  S  V  S  S  D  T  A  A  W  N  W  I  R 
                    Query_8859   2    CTGGCGAAACCCACACAGACCCTCTCACTCACCTGTGGCATCTCCGGGGACAGTGTCTCTAGCGACACTGCTGCTTGGAACTGGATCAGG  91
V  94.5% (260/275)  IGHV6-1*01   31   ....T...G...T.G......................C.........................A...G......................  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  K  S  K  W  Y  N  D  Y  A  V  S  V  K  G  R 
                    Query_8859   92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAAGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAGGGTCGA  181
V  94.5% (260/275)  IGHV6-1*01   121  ..............................................G....................................AA.....  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  I  N  S  D  T  S  K  N  Q  F  S  L  H  L  N  S  M  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_8859   182  ATAACCATCAACTCAGACACATCCAAGAACCAGTTCTCCCTGCACCTGAACTCTATGACTCCCGAGGACACGGCTGTATACTACTGTGCA  271
V  94.5% (260/275)  IGHV6-1*01   211  ............C...............................G.........G......................G..T.........  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------CDR3-IMGT--------->                                  
                                       R  D  R  G  L  L  F  D  F  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_8859   272  AGAGATCGGGGACTCCTGTTTGACTTCTGGGGCCAGGGAATCCTGGTCACCGTCTCGTCAG  332
V  94.5% (260/275)  IGHV6-1*01   301  .....--------------------------------------------------------  305
                                       R                                                           
D  100.0% (7/7)     IGHD3-10*01  14   -----.......-------------------------------------------------  20
J  93.0% (40/43)    IGHJ4*02     6    ------------------.......A..............C...............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_127408

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           308     4e-86
IGHD3-10*02                                                                                           18.0    0.66 
IGHJ4*02                                                                                              58.4    1e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGAC	GCGAGAGTCGAGGACACGGCTATC	TATTACTGTGTT	AGAGGTACACAGCAATGGGCCGGAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTATCTATTACTGTGTTAGAGGTACACAGCAATGGGCCGGAATTGACTAT	AIYYCVRGTQQWAGIDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	63	7	0	90
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	42	9	0	82.4
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	265	96	84	12	0	87.5
Total	N/A	N/A	265	231	34	0	87.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  R  P  G  E  S  L  R  I  S  C  K  T  S  G  Y  S  F  T  N  Y
                    Query_8860   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAGACCCGGGGAGTCTCTGAGAATCTCCTGTAAGACTTCTGGATACAGCTTTACCAATTA  90
V  87.2% (231/265)  IGHV5-51*01  6    .............................A..AG................AG............GG....................GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  H  W  V  R  Q  V  P  G  K  E  L  E  W  M  G  S  I  Y  P  G  N  S  D  T  R  G  S  P
                    Query_8860   91   CTGGATTCATTGGGTGCGCCAGGTGCCCGGGAAAGAACTGGAGTGGATGGGGAGTATATATCCAGGGAACTCTGATACCAGAGGCAGCCC  180
V  87.2% (231/265)  IGHV5-51*01  96   ......CGGC............A............GC................TC..C.....T..TG..............TA......  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  L  S  V  D  T  S  S  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  A  R
                    Query_8860   181  ATCGTTCCAAGGCCACGTCACCCTCTCAGTTGACACCTCCAGCAGCACCGCCTACCTTCAGTGGAGCAGCCTGAAGGCCTCGGACGCGAG  270
V  87.2% (231/265)  IGHV5-51*01  186  G..C...........G......A......CC....AG....T...............G...........................-----  270
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D      

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  E  D  T  A  I  Y  Y  C  V  R  G  T  Q  Q  W  A  G  I  D  Y  W  G  Q  G  T  Q  V  T  V
                    Query_8860   271  AGTCGAGGACACGGCTATCTATTACTGTGTTAGAGGTACACAGCAATGGGCCGGAATTGACTATTGGGGCCAGGGAACGCAGGTCACTGT  360
D  91.7% (11/12)    IGHD3-10*02  2    -------------------.......A....-----------------------------------------------------------  13
J  90.5% (38/42)    IGHJ4*02     7    --------------------------------------------------------.......C..............C.T......C..  40

                                              
                                        S  S  
                    Query_8860   361  CTCCTCAG  368
J  90.5% (38/42)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_90722

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD6-13*01                                                                                           18.0    0.55  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CACG	AGCAGCTGG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACACGAGCAGCTGGATTGACTAC	ARDTSSWIDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8861   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ...............................G...........G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  T  G  S  T  N  Y  N  P  S  L  K  S  Q  F  T  I  S  V  D  T  S  K  N 
                    Query_8861   91   TGGATTGGGTATATCTTTTACACTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCAATTCACCATATCAGTAGACACGTCGAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  ................A.....G...................................G.G......................C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  S  S  W  I  D  Y  W 
                    Query_8861   181  CAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACACGAGCAGCTGGATTGACTACTGG  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-13*01  10   ---------------------------------------------------------------------.........------------  18
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------...........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_8861   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (42/42)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_28127

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           332     3e-93
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACATG	ATTACCATGAT	TCCA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAACATGATTACCATGATTCCAGATGCTTTTGATATC	ARDNMITMIPDAFDI	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  S  S  I  N  S  G  G  Y  Y  W  S  W  T  R  Q  H  P  G  K  A  
                    Query_8862   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTAGCTCCATCAACAGTGGAGGTTACTACTGGAGCTGGACCCGCCAGCACCCAGGGAAGGCCC  93
V  92.4% (231/250)  IGHV4-31*02  50   .....TCC...A.................G.........G......T...................T....................G..  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  D  S  G  G  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  
                    Query_8862   94   TGGAGTGGATTGGATACATCTATGACAGTGGGGGCACCTCCTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCACTAGACACGTCTA  183
V  92.4% (231/250)  IGHV4-31*02  140  .............G.........T........A......A...........................T.........G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  D  N  M  I  T  M  I  
                    Query_8862   184  GGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACTGTCGCGGACACGGCCGTATATTACTGTGCGAGAGATAACATGATTACCATGATTC  273
V  92.4% (231/250)  IGHV4-31*02  230  A...................C...............C...............G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD3-22*01  3    -----------------------------------------------------------------------------.....T.....--  13

                                      ---------------->                                  
                                      P  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8862   274  CAGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
J  100.0% (49/49)   IGHJ3*02     2    --.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_247193

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8863   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8863   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_8863   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8863   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_84967

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           433     1e-123
IGHD3-10*01                                                                                           12.2    36    
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTCAATT	TGGTTC	CGCAAATGG	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTCAATTTGGTTCCGCAAATGGCTACCAGTACGGCATGGACGTC	ARFQFGSANGYQYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  P  H  Y
                    Query_8864   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTAAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTCCCCACTA  90
V  97.9% (283/289)  IGHV5-51*03  6    ................................................G.................................A..AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  S  P
                    Query_8864   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACAGCCC  180
V  97.9% (283/289)  IGHV5-51*03  96   .................................................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8864   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (283/289)  IGHV5-51*03  186  ............................................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  F  Q  F  G  S  A  N  G  Y  Q  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_8864   271  CATGTATTACTGTGCGAGATTTCAATTTGGTTCCGCAAATGGCTACCAGTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  97.9% (283/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-10*01  10   ---------------------------......---------------------------------------------------------  15
J  94.5% (52/55)    IGHJ6*02     8    ------------------------------------------....T.C.....T...................................  55

                                             
                                        S  S 
                    Query_8864   361  CTCCTCA  367
J  94.5% (52/55)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_94358

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           386     1e-109
IGHD1-26*01                                                                                           12.2    31    
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATAT	GTGGGA	AGGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATATGTGGGAAGGTACTACTTTGACTAC	AREYVGRYYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	249	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_8865   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  99.2% (249/251)  IGHV4-61*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  Y  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8865   91   CTGGAGTGGATTGGGTATATCTATTACAGTGGGTACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  99.2% (249/251)  IGHV4-61*01  139  .................................AG.......................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  Y  V  G  R  Y  Y 
                    Query_8865   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAATATGTGGGAAGGTACTAC  270
V  99.2% (249/251)  IGHV4-61*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-26*01  7    ---------------------------------------------------------------------------......---------  12
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8865   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_84961

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           327     9e-92
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAAG	AGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQEWLPGDWYFDL	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  R  N  Y  W  S  W  I  R  Q  P  P  G  E  R  L  E 
                    Query_8866   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCACTAGAAACTACTGGAGCTGGATTCGGCAGCCCCCAGGGGAGAGACTGGAG  90
V  93.0% (226/243)  IGHV4-59*08  49   ...................C...........G........G...TT................C...............A..G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_8866   91   TGGATAGCGTATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  93.0% (226/243)  IGHV4-59*08  139  .....T.G.......T...........AG...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  F  L  P  A  V  Q  E  W  L 
                    Query_8866   181  CAGTTCTCCCTGAAGATGACCTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTG  270
V  93.0% (226/243)  IGHV4-59*08  229  ...............C...G.........................G.................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  10   ----------------------------------------------------------------------------------........  17

                                      ----------------------->                                  
                                       P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_8866   271  CCAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCGTCAG  328
J  96.1% (49/51)    IGHJ2*01     3    -------......................................A.......C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_247197

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD6-19*01                                                                                           31.5    5e-05
IGHJ5*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATCCTC	TAGCAGTGGCTGGTAC	CT	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGATCCTCTAGCAGTGGCTGGTACCTCAACTGGTTCGACCCC	ARGSSSSGWYLNWFDP	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	113	1	0	99.1
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_8867   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAGT  93
V  95.5% (232/243)  IGHV4-59*01  50   .....TCC...A..................G..........................................A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  F  I  Y  Y  T  G  S  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_8867   94   GGATTGGGTTTATCTATTACACTGGGAGCGCCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAACC  183
V  95.5% (232/243)  IGHV4-59*01  140  .........A...........G.......A...........................................A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  S  S  S  G  W  Y  L  
                    Query_8867   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGGATCCTCTAGCAGTGGCTGGTACCTCA  273
V  95.5% (232/243)  IGHV4-59*01  230  ...........................................................A...---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (16/16)   IGHD6-19*01  6    ----------------------------------------------------------------------................----  21
J  100.0% (50/50)   IGHJ5*02     2    ----------------------------------------------------------------------------------------..  3

                                      ------------->                                  
                                      N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8867   274  ACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (50/50)   IGHJ5*02     4    ................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_247194

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           307     1e-85
IGHD2-2*01                                                                                            12.2    30   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GGGGA	TACCAG	GCAGGTGTG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGGGGATACCAGGCAGGTGTGGACTAC	VGGGYQAGVDY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	99	15	0	86.8
CDR3-IMGT (germline)	240	246	7	5	2	0	71.4
Total	N/A	N/A	246	221	25	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  F  M  T  W  V  R  Q  P  P  G  K  G  L  
                    Query_8868   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACAGTCAGTAGCAACTTCATGACCTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  89.8% (221/246)  IGHV3-53*01  47   ...............................G.....C.............A.....G.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  V  Y  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  T  S  K  
                    Query_8868   91   AGTGGGTCTCAGTTGTTTATGGCGGCGGTAGCACATATTACGCAGACTCCGTGAAGGGACGATTCACCGTCTCGAGAGACACCTCCAAGG  180
V  89.8% (221/246)  IGHV3-53*01  137  ..............A.....A....T...........C....................C.........A....C.......AT......A  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      D  T  V  Y  L  Q  L  N  R  L  R  V  E  D  T  A  V  Y  Y  C  V  G  G  G  Y  Q  A  G  V  D  
                    Query_8868   181  ACACGGTTTATCTTCAATTGAATAGACTGAGAGTCGAAGACACGGCCGTATATTACTGTGTGGGAGGGGGATACCAGGCAGGTGTGGACT  270
V  89.8% (221/246)  IGHV3-53*01  227  .....C.G.........A....C..C.......C...G...........G..........C.A...------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (6/6)     IGHD2-2*01   16   -----------------------------------------------------------------------......-------------  21
J  100.0% (38/38)   IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                
                                      Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8868   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  304
J  100.0% (38/38)   IGHJ4*02     13   ..................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_247195

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD3-16*02                                                                                           18.0    0.68  
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATGATAGTGGC	AGTTATCTTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGCAGTTATCTTTATTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_8869   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCTTCTGGATACACCTTTACCAACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ..................................................A..............G...........G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  D  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_8869   91   CTGGATCGACTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G...................................................................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  I  T  I  S  A  D  N  S  I  G  T  A  Y  L  Q  L  H  S  L  K  A  S  D  T  A
                    Query_8869   181  GTCCTTCGAAGGCCAAATCACCATCTCAGCCGACAACTCCATCGGCACCGCCTACCTGCAGTTGCACAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .......C.......GG...................G......A..................G.AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_8869   271  CATGTATTACTGTGCGAGACATGGGGATGATAGTGGCAGTTATCTTTATTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD3-16*02  23   -------------------------------------.......G....-----------------------------------------  34
J  98.1% (53/54)    IGHJ6*02     9    -------------------------------------------------....A....................................  49

                                                   
                                        T  V  S  S 
                    Query_8869   361  CACCGTCTCCTCA  373
J  98.1% (53/54)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_320224

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           305     3e-85
IGHD3-10*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ATTTCT	TATGGTTCGGGG	CGTCCCGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAATTTCTTATGGTTCGGGGCGTCCCGGGTGGTTCGGCCCC	ARISYGSGRPGWFGP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	219	24	0	90.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  K  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8870   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAAATACTTCTGGAGTTGGATCCGTCAGCCCCCCGGGAAGGGCCTGGAG  90
V  90.1% (219/243)  IGHV4-59*01  49   ...............................G.........T.GT....A......C........G........A........A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  I  G  T  T  S  Y  N  P  S  L  E  T  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8870   91   TGGATTGGTTACATCTATTACATTGGGACCACCAGCTACAACCCCTCCCTCGAGACTCGGGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  90.1% (219/243)  IGHV4-59*01  139  ........G..T..........G.....G.....A................A...G...A..............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  D  A  D  R  A  M  Y  Y  C  A  R  I  S  Y  G  S  G  R  P  G 
                    Query_8870   181  CAGTTCTCCCTGAAGCTAACGTCTGTGACCGATGCGGACAGGGCCATGTATTACTGTGCGCGAATTTCTTATGGTTCGGGGCGTCCCGGG  270
V  90.1% (219/243)  IGHV4-59*01  229  .................G.GC..........C........C....G..............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD3-10*01  8    ---------------------------------------------------------------------............---------  19

                                      ----------->                                 
                                       W  F  G  P  W  G  Q  G  T  P  V  P  L  S  S 
                    Query_8870   271  TGGTTCGGCCCCTGGGGCCAGGGGACCCCGGTCCCCCTCTCCTCA  315
J  88.9% (40/45)    IGHJ5*02     6    .......A...............A....T....A..G........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_320225

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           346     2e-97
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CACCC	TATTGTAGTAGTGTCAGTTGTTATG	AGGGATC	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGCACCCTATTGTAGTAGTGTCAGTTGTTATGAGGGATCCTACCATTACGGTATGGACGTC	VRAPYCSSVSCYEGSYHYGMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8871   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCCGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-33*01  47   ............................T................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  T  V  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8871   91   AGTGGGTGGCAATTATATGGTATGATGGAACTGTTAAATACTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-33*01  137  ...........G..................G.AA...........C............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  D  D  T  A  V  Y  F  C  V  R  A  P  Y  C  S  S  V  
                    Query_8871   181  AGAACACGTTGTATTTGCAAATGGATAGCCTGAGAGCCGACGACACGGCTGTGTATTTCTGTGTGAGAGCACCCTATTGTAGTAGTGTCA  270
V  94.4% (235/249)  IGHV3-33*01  227  ........C.....C........A.C..............G................A.....C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.0% (21/25)    IGHD2-2*01   5    --------------------------------------------------------------------------............AC..  20

                                      -CDR3-IMGT--------------------------->                                 
                                      S  C  Y  E  G  S  Y  H  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8871   271  GTTGTTATGAGGGATCCTACCATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  84.0% (21/25)    IGHD2-2*01   21   .C..C....--------------------------------------------------------------  29
J  96.4% (53/55)    IGHJ6*02     8    ----------------....T.C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_247198

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           385     4e-109
IGHD3-16*01                                                                                           12.2    32    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGACGTGCGCACTCAA	GGGGGA	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGACGTGCGCACTCAAGGGGGATTGACTAC	ARDLGRAHSRGIDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	248	2	0	99.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8872   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  99.2% (248/250)  IGHV3-64*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  T  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8872   91   AATATGTTTCAGCTATTAGTACTAATGGGGGTAGCACATATTATGCAAACTCTGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  99.2% (248/250)  IGHV3-64*01  137  .....................G....................................................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  D  D  M  A  V  Y  Y  C  A  R  D  L  G  R  A  H  S  
                    Query_8872   181  AGAACACGCTGTATCTTCAAATGGGCAGCCTGAGAGCTGACGACATGGCTGTGTATTACTGTGCGAGAGATCTTGGACGTGCGCACTCAA  270
V  99.2% (248/250)  IGHV3-64*01  227  ........................................G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       

                                      ------------->                                 
                                      R  G  I  D  Y  W  G  L  G  T  L  V  T  V  S  S 
                    Query_8872   271  GGGGGATTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCA  317
D  100.0% (6/6)     IGHD3-16*01  18   ......-----------------------------------------  23
J  97.6% (40/41)    IGHJ4*02     7    ------...............A.........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_94350

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTC	ARHGDDSGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	283	8	0	97.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_8873   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCACCTA  90
V  97.3% (283/291)  IGHV5-51*01  6    ..............................A...................A...................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  T  R  Y  S  P
                    Query_8873   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  97.3% (283/291)  IGHV5-51*01  96   ........G.................................................T...............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8873   181  GTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.3% (283/291)  IGHV5-51*01  186  .......C...................A.C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  D  S  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_8873   271  CATGTATTACTGTGCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  97.3% (283/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------........A.....-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------.......AC.....T.............................  49

                                                   
                                        T  V  S  S 
                    Query_8873   361  CACCGTCTCCTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_320220

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           336     1e-94
IGHD3-3*01                                                                                            10.3    118  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATC	GAGTG	CCCTTCCAATTTG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCGAGTGCCCTTCCAATTTGACGGTATGGACGTC	ARNRVPFQFDGMDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8874   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTTCTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.2% (229/243)  IGHV4-59*08  49   .......................................A..AG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  N  G  Y  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_8874   91   TGGATTGGCTATATGTATTACAATGGGTACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGTCCAAGAAC  180
V  94.2% (229/243)  IGHV4-59*08  139  ........G.....C.......G....AG.......................................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       L  F  S  L  M  L  T  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  N  R  V  P  F  Q  F  D  G 
                    Query_8874   181  CTGTTCTCCCTGATGCTGACCTCTGTGACCTCCGCAGACACGGCCGTGTATTACTGTGCGAGAAATCGAGTGCCCTTCCAATTTGACGGT  270
V  94.2% (229/243)  IGHV4-59*08  229  .A...........A.....G..........G................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-3*01   16   -------------------------------------------------------------------.....------------------  20
J  95.7% (45/47)    IGHJ6*02     16   -------------------------------------------------------------------------------------.....  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_8874   271  ATGGACGTCTGGGGCCAAGGGACGACGGTCAGCGTCTCCTCA  312
J  95.7% (45/47)    IGHJ6*02     21   .......................C.......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_320221

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           279     3e-77
IGHD3-10*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGGACATGTTAG	GGTTCGGGGA	CTTGGTTCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACATGTTAGGGTTCGGGGACTTGGTTCCCTTTGCCCAC	ARDMLGFGDLVPFAH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	212	34	0	86.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  S  Y  A  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8875   1    GGTCCCTGAGACTCTCCTGTGCGGTCTCTGGATTCACCTTTTCCAGTTATGCCATCTCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  86.2% (212/246)  IGHV3-23*01  47   ......................A.C................AG...C........GAG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  G  D  S  A  A  K  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_8875   91   AGTGGGTCTCAGGCATCGGTGACAGTGCTGCCAAGACATATTACGCAGACTCCGTGAGGGGACGATTCACCATCTCCAGAGACAATTCCA  180
V  86.2% (212/246)  IGHV3-23*01  137  ............CT..TA...GT....G..GT.GC.....C................A...C..G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  M  T  V  Y  L  Q  M  N  S  L  R  P  E  D  T  A  M  Y  F  C  A  R  D  M  L  G  F  G  D  
                    Query_8875   181  GAATGACGGTATATCTGCAAATGAACAGTCTGAGACCCGAGGACACGGCCATGTATTTCTGTGCGAGGGACATGTTAGGGTTCGGGGACT  270
V  86.2% (212/246)  IGHV3-23*01  227  AG.AC...C.G.................C......G..............G.A....A........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD3-10*01  11   ------------------------------------------------------------------------------..........--  20

                                      ---------------->                                  
                                      L  V  P  F  A  H  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_8875   271  TGGTTCCCTTTGCCCACTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  321
J  90.9% (40/44)    IGHJ4*02     5    -------.....A.T..............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_320222

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD2-15*01                                                                                           10.3    132   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CGAGAAG	GGTGG	CGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGACACGAGAAGGGTGGCGGGGCGAACGACTAC	VRHEKGGGANDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	6	2	0	75
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P  N  Y
                    Query_8876   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCCAATTA  90
V  93.8% (273/291)  IGHV5-51*01  6    ....................................C........................................GC...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  A  D  S  D  T  R  Y  S  L
                    Query_8876   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAACATCTATCCTGCTGACTCTGACACCAGATACAGTCT  180
V  93.8% (273/291)  IGHV5-51*01  96   .....................................................T...........G.........T...........C.C  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8876   181  GACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACACCGC  270
V  93.8% (273/291)  IGHV5-51*01  186  .T.....C.............................................................C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8876   271  CGTGTATTATTGTGTCAGACACGAGAAGGGTGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  351
V  93.8% (273/291)  IGHV5-51*01  276  .A.......C....CG.....------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                               
D  100.0% (5/5)     IGHD2-15*01  14   ----------------------------.....------------------------------------------------  18
J  97.4% (37/38)    IGHJ4*02     9    -------------------------------------------....................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_320223

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           343     2e-96
IGHD3-10*01                                                                                           14.1    8.8  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCCAC	CGCGAGGTTTATGA	ATGGTTC	TTCTTTGGTGGACTACTTT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCACCGCGAGGTTTATGAATGGTTCTTCTTTGGTGGACTACTTTTTTCACTAC	STARFMNGSSLVDYFFHY	249	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	253	5	4	1	0	80
Total	N/A	N/A	253	236	17	0	93.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  R  F  S  F  S  N  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8877   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTCGATTCAGTTTCAGTAACGCCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.3% (236/253)  IGHV3-15*01  47   .......T............G........G......C....................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  L  N  S  K  T  D  G  G  T  A  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_8877   91   AGTGGGTTGGCCGTCTTAACAGCAAAACTGATGGTGGGACAGCAGACTATGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  93.3% (236/253)  IGHV3-15*01  137  ..............A....A.....................A.......C........................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  E  N  R  L  Y  L  Q  M  K  S  L  R  T  E  D  T  A  V  Y  Y  C  S  T  A  R  F  M  N  
                    Query_8877   181  ATTCAGAAAACAGGCTGTATCTACAAATGAAGAGCCTGAGGACCGAGGACACAGCCGTTTATTACTGTTCCACCGCGAGGTTTATGAATG  270
V  93.3% (236/253)  IGHV3-15*01  227  .....A......C.........G........C.......AA.................G.........A....-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (7/7)     IGHD3-10*01  9    ---------------------------------------------------------------------------------------...  11

                                      -CDR3-IMGT--------------------->                                  
                                      G  S  S  L  V  D  Y  F  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8877   271  GTTCTTCTTTGGTGGACTACTTTTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  100.0% (7/7)     IGHD3-10*01  12   ....--------------------------------------------------------------  15
J  97.7% (42/43)    IGHJ4*02     6    -----------------------...G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_113286

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           422     2e-120
IGHD2-2*01                                                                                            21.8    0.047 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAGTAGTGAA	TACCAGCTGCT	GTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCC	ARSSSEYQLLFWFDP	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	70	1	0	98.6
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	108	6	0	94.7
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  
                    Query_8878   8    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCAGCT  97
V  96.6% (280/290)  IGHV5-51*03  5    ..................................................................G............C..........  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  
                    Query_8878   98   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATATATCCTGGTGACTCTGATGCCAGATATAGTC  187
V  96.6% (280/290)  IGHV5-51*03  95   ..........................................................C..................A.......C..C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  K  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_8878   188  CGTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTCAAGGCCTCGGACACCG  277
V  96.6% (280/290)  IGHV5-51*03  185  ........C.....................C..........................................G................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------CDR3-IMGT----------------->                               
                                      A  M  Y  Y  C  A  R  S  S  S  E  Y  Q  L  L  F  W  F  D  P  W  G  Q  G  T  L  V  T  V  T  
                    Query_8878   278  CCATGTATTATTGTGCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCACCT  367
V  96.6% (280/290)  IGHV5-51*03  275  ..........C.........----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (11/11)   IGHD2-2*01   16   --------------------------------...........-----------------------------------------------  26
J  97.9% (46/47)    IGHJ5*02     5    ----------------------------------------------........................................T...  48

                                         
                                      S  
                    Query_8878   368  CAG  370
J  97.9% (46/47)    IGHJ5*02     49   ...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_113287

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           427     1e-121
IGHD6-13*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              114     2e-29 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TT	CAGCAGCTGG	CAAACCGGCTAACA	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCAGCAGCTGGCAAACCGGCTAACAATTACTACTACTACTACGGTCTGGACGTC	ARHSAAGKPANNYYYYYGLDV	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	282	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_8879   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGTTA  90
V  96.9% (282/291)  IGHV5-51*01  6    ....................................C..................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  L  P  G  K  G  L  E  W  M  G  F  I  Y  P  G  D  S  H  T  K  Y  S  P
                    Query_8879   91   CTGGATCGGCTGGGTGCGCCAGCTGCCCGGGAAAGGCCTGGAGTGGATGGGATTCATCTATCCTGGTGACTCTCATACCAAATACAGCCC  180
V  96.9% (282/291)  IGHV5-51*01  96   ......................A............................GA....................G......G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_8879   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (282/291)  IGHV5-51*01  186  .......C...........................................................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        M  Y  Y  C  A  R  H  S  A  A  G  K  P  A  N  N  Y  Y  Y  Y  Y  G  L  D  V  W  G  Q  G  T
                    Query_8879   271  CATGTATTACTGTGCGAGACATTCAGCAGCTGGCAAACCGGCTAACAATTACTACTACTACTACGGTCTGGACGTCTGGGGCCAAGGGAC  360
V  96.9% (282/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------..........---------------------------------------------------------  18
J  98.4% (61/62)    IGHJ6*02     1    -----------------------------------------------....................A......................  43

                                                         
                                        T  V  T  V  S  S 
                    Query_8879   361  CACGGTCACCGTCTCCTCA  379
J  98.4% (61/62)    IGHJ6*02     44   ...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_21449

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           12.2    33   
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GCCGCGAAAATCGGTCTTTGGACTACTTATCCC	TGGGGG	GGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCCGCGAAAATCGGTCTTTGGACTACTTATCCCTGGGGGGGGCGACTGGTTCGACCCC	ARGPRKSVFGLLIPGGGDWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  D  Y  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8880   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCGATTACTATTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (233/245)  IGHV4-34*01  49   .......................................AG.GGT..C..........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  G  A  T  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8880   91   TGGATTGGGGAAATCAATCATGGTGCAACGACCAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  .....................A...G..GC............C...............................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  K  S  V  F  G  L 
                    Query_8880   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGCCGCGAAAATCGGTCTTTGGACTA  270
V  95.1% (233/245)  IGHV4-34*01  229  ....................C............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      -IMGT--------------------------->                                  
                                       L  I  P  G  G  G  D  W  F  D  P  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_8880   271  CTTATCCCTGGGGGGGGCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  337
D  100.0% (6/6)     IGHD3-16*01  17   --------......-----------------------------------------------------  22
J  97.9% (47/48)    IGHJ5*02     4    -------------------................................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_21448

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           277     1e-76
IGHD3-16*02                                                                                           27.6    9e-04
IGHJ3*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGGTCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCCCAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGGTCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCCCAATTGCTATACTGTC	ARGLLIEGPNYVWGSFRRNPNCYTV	261	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	40	11	0	78.4
CDR2-IMGT	126	146	21	16	5	0	76.2
FR3-IMGT	147	260	114	92	22	0	80.7
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	222	45	0	83.1


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  
                    Query_8881   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCACTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGC  90
V  83.1% (222/267)  IGHV4-59*01  26   ................T..............C.........A....C.......G.......A...G..........AG....A.C....  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  R  R  L  E  W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  
                    Query_8881   91   AGCCTCCAGGGAGGAGACTGGAGTGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCC  180
V  83.1% (222/267)  IGHV4-59*01  116  ....C.......A.G...........A....G.ATA...AT.A..G..........A..............C...A......A......A  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      L  S  G  D  M  S  R  N  Q  L  S  L  N  L  I  G  V  T  A  A  D  T  A  P  Y  F  C  A  R  G  
                    Query_8881   181  TGTCAGGAGACATGTCTAGGAATCAGTTGTCTCTCAACCTGATCGGAGTGACCGCTGCGGACACGGCCCCGTATTTCTGTGCGAGAGGTC  270
V  83.1% (222/267)  IGHV4-59*01  206  .A....T.....C...C.A...C.....C..C..G..G....G.TCT.....................GT.....A...........---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -----------------------CDR3-IMGT-------------------------------->                         
                                      L  L  I  E  G  P  N  Y  V  W  G  S  F  R  R  N  P  N  C  Y  T  V  W  G  Q  G  T  P  V  T  
                    Query_8881   271  TTCTTATCGAAGGTCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCCCAATTGCTATACTGTCTGGGGCCAAGGGACTCCGGTCACCG  360
D  94.1% (16/17)    IGHD3-16*02  14   -----------------------.............A...--------------------------------------------------  30
J  92.1% (35/38)    IGHJ3*01     13   -------------------------------------------------------------..................AAT........  41

                                               
                                      V  S  S  
                    Query_8881   361  TCTCTTCAG  369
J  92.1% (35/38)    IGHJ3*01     42   .........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_113282

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            325     3e-91
IGHD3-9*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAAGAGCGGTACGCATTGAT	ACTGTTTATT	CCGAGGGGCCTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAAGAGCGGTACGCATTGATACTGTTTATTCCGAGGGGCCTCCTGACTAC	ATRAVRIDTVYSEGPPDY	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  N  S  N  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_8882  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGTCCATCAGTAATAGTAACTGGTGGACTTGGATTCGCCAGCCCCCAGGAAAGGGGCTG  90
V  92.6% (226/244)  IGHV4-4*01  49   ................................C........C.G..............G....G.C..............G.........  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  I  D  S  G  S  T  N  Y  N  P  S  L  M  S  R  V  T  I  S  L  D  K  S  K 
                    Query_8882  91   GAGTGGATTGGGGAAATTATTGATAGTGGGAGCACCAACTACAACCCGTCCCTCATGAGTCGAGTCACCATCTCACTAGACAAGTCCAAG  180
V  92.6% (226/244)  IGHV4-4*01  139  .................CTA.C.................................A...............A...G..............  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                      N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  T  R  A  V  R  I  D  T  V 
                    Query_8882  181  AATCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGACAAGAGCGGTACGCATTGATACTGTT  270
V  92.6% (226/244)  IGHV4-4*01  229  ..C..............G....G................................G........--------------------------  292
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  90.0% (9/10)     IGHD3-9*01  17   ------------------------------------------------------------------------------------....G.  22

                                     GT--------------------->                                  
                                      Y  S  E  G  P  P  D  Y  W  G  Q  G  P  L  V  T  V  S  S  
                    Query_8882  271  TATTCCGAGGGGCCTCCTGACTACTGGGGCCAGGGACCCCTGGTCACCGTCTCCTCAG  328
D  90.0% (9/10)     IGHD3-9*01  23   ....------------------------------------------------------  26
J  97.6% (40/41)    IGHJ4*02    8    -----------------...................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_113283

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           291     5e-81
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	213	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_8883   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  88.8% (213/240)  IGHV4-59*01  49   ..................A......................T.GT.A...C....G.............C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R 
                    Query_8883   91   TGGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGA  180
V  88.8% (213/240)  IGHV4-59*01  139  .......GG.....C.ATT................C..C...........C.....................G.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G 
                    Query_8883   181  CACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGT  270
V  88.8% (213/240)  IGHV4-59*01  229  ..G...........G....G............T..............G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-22*01  7    -----------------------------------------------------------------------------..........A..  19

                                      ----------------------->                                  
                                       G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8883   271  GGCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  328
D  93.3% (14/15)    IGHD3-22*01  20   ..--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    --------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_113280

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD6-6*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTC	ATTREQLVPIFDF	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	268	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  L  S  S  Y
                    Query_8884   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATTTCCTGTAAGGGTTCTGGATACAGATTAAGCAGTTA  90
V  93.4% (268/287)  IGHV5-51*01  6    ......................................................C.......................C..T.C...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  E  T  K  Y  S  P
                    Query_8884   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCGTCTATCCTGGTGACTCTGAGACCAAATACAGCCC  180
V  93.4% (268/287)  IGHV5-51*01  96   C.......G..........................................G...A...................T....G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  A  S  G  T  A  F  L  Q  W  D  S  L  K  A  S  D  T  A
                    Query_8884   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGGCCAGCGGCACCGCCTTCCTACAGTGGGACAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (268/287)  IGHV5-51*01  186  .......C.............................T...T.A.........A...G......AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_8884   271  CATGTATTACTGTGCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  356
V  93.4% (268/287)  IGHV5-51*01  276  .................---------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------.......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_113281

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8885   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_8885   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_8885   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8885   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_21443

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         358     4e-101
IGHD1-26*01                                                                                           10.3    124   
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ACCTCTTGGGCGAAAGGGATAG	GTGGG	TGGGT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACCTCTTGGGCGAAAGGGATAGGTGGGTGGGTCTGGTTCGCCCCC	ARTSWAKGIGGWVWFAP	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  V  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_8886     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  96.0% (239/249)  IGHV4-30-4*01  49   ..................A............G.................A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  C  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8886     91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  96.0% (239/249)  IGHV4-30-4*01  139  ................A........................C................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  K  M  A  S  V  I  A  A  D  T  A  A  Y  Y  C  A  R  T  S  W  A  K  G  I 
                    Query_8886     181  AAGAACCAGTTCTCCCTGAAGATGGCCTCTGTGATTGCCGCAGACACGGCCGCGTATTACTGTGCCAGAACCTCTTGGGCGAAAGGGATA  270
V  96.0% (239/249)  IGHV4-30-4*01  229  .....................C..AG........C.................T................---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                        MGT-------------------->                                  
                                         G  G  W  V  W  F  A  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_8886     271  GGTGGGTGGGTCTGGTTCGCCCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  328
D  100.0% (5/5)     IGHD1-26*01    7    -.....----------------------------------------------------  11
J  95.7% (45/47)    IGHJ5*02       5    -----------........A..........................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_21442

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           360     1e-101
IGHD4-4*01                                                                                            12.2    31    
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-4*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	CTACAG	GTTACGGGG	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTACAGGTTACGGGGGGTATGGACGTC	ARGLQVTGGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	237	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8887   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (237/244)  IGHV4-59*01  49   .......................................................G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  T  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8887   91   TGGATTGGGTATATCCATTACAGTGGGACCACCAGCTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.1% (237/244)  IGHV4-59*01  139  ...............T............G.....A.......................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Q  V  T  G  G  M  D 
                    Query_8887   181  CACTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGGCCTACAGGTTACGGGGGGTATGGAC  270
V  97.1% (237/244)  IGHV4-59*01  229  ..G................G.................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD4-4*01   4    ------------------------------------------------------------------......------------------  9
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------.........  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8887   271  GTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  306
J  100.0% (45/45)   IGHJ6*02     27   ....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_21441

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           361     5e-102
IGHD3-10*01                                                                                           52.6    2e-11 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAATAAGTGGCTCAG	ATTACTATGGTTCGGGGAGTTATTATA	TTCGACCCTCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAATAAGTGGCTCAGATTACTATGGTTCGGGGAGTTATTATATTCGACCCTCATACTACTTTGACTCC	AKISGSDYYGSGSYYIRPSYYFDS	244	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	247	4	4	0	0	100
Total	N/A	N/A	247	239	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_8888   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAATAGTTATTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.8% (239/247)  IGHV4-39*01  49   ..............................................G......C....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  T  S 
                    Query_8888   91   CTGGAGTGGATTGCGAGTATCTATTATAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCTGTAGACACGTCC  180
V  96.8% (239/247)  IGHV4-39*01  139  .............G....................G...................................C......C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  G  V  Y  Y  C  A  K  I  S  G  S  D  Y  Y 
                    Query_8888   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGGTGTCTATTACTGTGCGAAAATAAGTGGCTCAGATTACTAT  270
V  96.8% (239/247)  IGHV4-39*01  229  .................................................C...G.............-----------------------  295
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (27/27)   IGHD3-10*01  3    ----------------------------------------------------------------------------------........  10

                                      -----CDR3-IMGT------------------------------>                                  
                                       G  S  G  S  Y  Y  I  R  P  S  Y  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8888   271  GGTTCGGGGAGTTATTATATTCGACCCTCATACTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  349
D  100.0% (27/27)   IGHD3-10*01  11   ...................------------------------------------------------------------  29
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------............A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_21440

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           375     3e-106
IGHD3-3*01                                                                                            12.2    37    
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAGCGAC	CGATTT	CTCGGGAATACTTA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAGCGACCGATTTCTCGGGAATACTTATACTACGGTATGGATGTC	AKDKRPISREYLYYGMDV	290	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	71	4	0	94.7
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	100	14	0	87.7
CDR3-IMGT (germline)	290	297	8	7	1	0	87.5
Total	N/A	N/A	296	268	28	0	90.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  S  F  T 
                    Query_8889   2    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACGTCTGGTTATAGTTTCACC  91
V  90.5% (268/296)  IGHV1-18*04  1    .....T...............................A...............................G.T........C.CC..T...  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  V  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  K  G  N  T  H  Y 
                    Query_8889   92   AACTACGGTGTCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAAGGGTAACACACACTAT  181
V  90.5% (268/296)  IGHV1-18*04  91   .G.......A....C........................................................C..T.........A.....  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       G  Q  K  F  Q  G  R  V  V  M  T  T  E  T  S  T  S  T  V  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_8889   182  GGTCAGAAGTTCCAGGGCAGAGTCGTCATGACGACAGAGACATCCACGAGCACAGTCTACATGGAGTTGCGGAGTCTGAGATCTGACGAC  271
V  90.5% (268/296)  IGHV1-18*04  181  .CA......C..............AC......C.....C................C..........C..A....C...............  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  K  D  K  R  P  I  S  R  E  Y  L  Y  Y  G  M  D  V  W  G  Q  G  T  T 
                    Query_8889   272  ACGGCCGTCTATTACTGCGCGAAAGATAAGCGACCGATTTCTCGGGAATACTTATACTACGGTATGGATGTCTGGGGCCAGGGGACCACG  361
V  90.5% (268/296)  IGHV1-18*04  271  ........G........T....G...----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD3-3*01   7    ----------------------------------......--------------------------------------------------  12
J  96.0% (48/50)    IGHJ6*02     12   ------------------------------------------------------..............C...........A.........  47

                                                    
                                       V  T  V  S  S
                    Query_8889   362  GTCACCGTCTCCTC  375
J  96.0% (48/50)    IGHJ6*02     48   ..............  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_21447

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	44	7	0	86.3
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	241	27	6	88


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  D  W  
                    Query_8890   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGGACTGGT  90
V  88.0% (241/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C......AG....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_8890   91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.0% (241/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_8890   181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.0% (241/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_8890   271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.0% (241/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_21446

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         300     9e-84
IGHD3-9*01                                                                                            14.1    8.7  
IGHJ2*01                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGACCGATAC	TGACTGG	GGTGGTCACACAGGGCTCTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACCGATACTGACTGGGGTGGTCACACAGGGCTCTTCTGGTACTTCGATCTC	AKTDTDWGGHTGLFWYFDL	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	218	26	0	89.3


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  V  V  S  G  Y  S  I  N  N  G  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  L 
                    Query_8891     1    ACCCTGTCCCTCACCTGCGTTGTGTCTGGTTACTCCATCAACAATGGTTACTACTGGGGCTGGCTCCGGCAGCCCCCAGGAAAGGGGCTG  90
V  89.3% (218/244)  IGHV4-38-2*01  49   ...................C...C................G..G...................A................G.........  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  V  Y  H  R  G  D  A  Y  Y  N  P  S  L  K  S  R  V  T  V  S  M  D  T  S  S 
                    Query_8891     91   GAGTGGATTGGGAGTGTCTATCATCGCGGGGACGCGTACTACAATCCGTCCCTCAAGAGTCGAGTCACCGTCTCAATGGACACGTCCAGT  180
V  89.3% (218/244)  IGHV4-38-2*01  139  ...............A........A.T...AG.A.C........C........................A.A...G.A..........AG  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                         N  Q  V  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  T  D  T  D  W  G  G  H 
                    Query_8891     181  AATCAGGTCTCCCTGAGCCTGAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAAGACCGATACTGACTGGGGTGGTCAC  270
V  89.3% (218/244)  IGHV4-38-2*01  229  ..C...T.........AG.....C...............................A........--------------------------  292
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-9*01     15   --------------------------------------------------------------------------.......---------  21

                                        MGT----------------------->                                  
                                         T  G  L  F  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8891     271  ACAGGGCTCTTCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  331
J  100.0% (50/50)   IGHJ2*01       4    -----------..................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_113288

Length=415
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           402     3e-114
IGHD4-17*01                                                                                           18.0    0.71  
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCCGACCGAAGG	GGTGACTAC	GACGAGGGGGA	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCGACCGAAGGGGTGACTACGACGAGGGGGAATTACAACTATTACTACGGTATGGACGTC	ARGPTEGVTTTRGNYNYYYGMDV	291	359	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	70	1	0	98.6
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	105	9	0	92.1
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	291	274	17	0	94.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  T  F  R  N  
                    Query_8892   7    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAGGAATT  96
V  94.2% (274/291)  IGHV1-69*01  5    ...................G.......................................................G.........C.GC.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  V  V  G  T  P  N  Y  A  
                    Query_8892   97   ATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTGTCGTTGGTACACCAAATTACGCAC  186
V  94.2% (274/291)  IGHV1-69*01  95   .................................................................A..T........G....C.......  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  N  I  D  Y  V  E  L  S  S  L  R  S  E  D  T  
                    Query_8892   187  AGAAATTCCAGGGCAGAGTCACAATTACCGCGGACGAATCCACCAACATAGACTACGTGGAGTTGAGCAGCCTGAGATCTGAGGACACGG  276
V  94.2% (274/291)  IGHV1-69*01  185  ....G.................G....................G.G..C..C....A.....C...........................  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-----------------------------CDR3-IMGT----------------------------->       
                                      A  V  Y  Y  C  A  R  G  P  T  E  G  V  T  T  T  R  G  N  Y  N  Y  Y  Y  G  M  D  V  W  G  
                    Query_8892   277  CCGTGTATTACTGTGCGAGAGGCCCGACCGAAGGGGTGACTACGACGAGGGGGAATTACAACTATTACTACGGTATGGACGTCTGGGGCC  366
V  94.2% (274/291)  IGHV1-69*01  275  .....................---------------------------------------------------------------------  295
                                      A  V  Y  Y  C  A  R                                                                       
D  100.0% (9/9)     IGHD4-17*01  8    ----------------------------------.........-----------------------------------------------  16
J  93.5% (58/62)    IGHJ6*02     1    ------------------------------------------------------.....T....C.........................  36

                                                                
                                      Q  G  T  T  V  I  V  S  S 
                    Query_8892   367  AAGGGACCACGGTCATCGTCTCTTCA  392
J  93.5% (58/62)    IGHJ6*02     37   ...............C......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40709304


Query= Query_113289

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           424     8e-121
IGHD1-26*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCG	AGTGGGAGCTACT	TGGGGCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTAC	ARDLEWELLGAFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	281	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  R  Y
                    Query_8893   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGATA  90
V  96.6% (281/291)  IGHV1-69*06  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  S  F  G  T  A  H  Y  A  Q
                    Query_8893   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTAGCTTTGGAACAGCACACTACGCACA  180
V  96.6% (281/291)  IGHV1-69*06  96   .................................................................T......T......A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  R  S  T  S  T  A  Y  M  E  L  S  G  L  S  S  E  D  T  A
                    Query_8893   181  GAGATTCCAGGGCAGAGTCACGATTACCGCGGACAGATCCACGAGCACAGCCTACATGGAGCTGAGCGGCCTGAGCTCTGAGGACACGGC  270
V  96.6% (281/291)  IGHV1-69*06  186  ..AG...............................A...............................A.......A..............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  D  L  E  W  E  L  L  G  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8893   271  CGTGTATTACTGTGCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  96.6% (281/291)  IGHV1-69*06  276  .....................--------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                       
D  100.0% (13/13)   IGHD1-26*01  6    --------------------------.............--------------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     6    ----------------------------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_182648

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           276     3e-76
IGHD3-10*01                                                                                           10.3    121  
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCAC	GGTTC	C	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCACGGTTCCTGATGCTTTTGATGTC	ARGTVPDAFDV	258	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	143	39	18	6	15	46.2
FR3-IMGT	144	257	114	106	8	0	93
CDR3-IMGT (germline)	258	264	7	7	0	0	100
Total	N/A	N/A	264	222	27	15	84.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8894   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGACGACTATGCCTTGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  84.1% (222/264)  IGHV3-21*01  47   ........................................CAGTAG....AG.A..A..........C..G..............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><--------------CDR2-IMGT--------------><------------------------------------
                                      E  W  V  S  S  M  S  S  S  S  K  R  I  S  T  G  S  R  Y  Y  P  D  S  A  K  G  R  F  T  I  
                    Query_8894   91   AGTGGGTCTCATCCATGAGTAGCTCATCCAAGCGTATCAGTACTGGTTCCAGATACTACCCAGACTCAGCGAAGGGCCGCTTCACCATCT  180
V  84.1% (222/264)  IGHV3-21*01  137  ................T.....T---------------....G.A...A..T.......G.........T.........A..........  211
                                      E  W  V  S  S  I  S  S                 S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  

                                      ----------------FR3-IMGT----------------------------------------------------><-----------C
                                      S  R  D  N  A  K  N  S  L  Y  L  Q  I  N  N  L  R  T  D  D  T  A  V  Y  Y  C  A  R  G  T  
                    Query_8894   181  CCAGAGACAACGCCAAGAACTCACTATATCTGCAAATCAACAACCTGAGAACCGACGACACGGCTGTGTATTACTGTGCGAGAGGCACGG  270
V  84.1% (222/264)  IGHV3-21*01  212  .........................G...........G....G.......G....G............................------  295
                                      S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R        
D  100.0% (5/5)     IGHD3-10*01  11   ----------------------------------------------------------------------------------------..  12

                                      DR3-IMGT----------->                                 
                                      V  P  D  A  F  D  V  W  G  Q  G  T  K  V  T  V  S  S 
                    Query_8894   271  TTCCTGATGCTTTTGATGTCTGGGGCCAAGGGACAAAGGTCACCGTCTCTTCA  323
D  100.0% (5/5)     IGHD3-10*01  13   ...--------------------------------------------------  15
J  98.0% (48/49)    IGHJ3*01     1    ----................................T................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_1593

Length=425
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           371     8e-105
IGHD2-21*02                                                                                           14.1    10    
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGCAC	TGTAGTGCTGACT	AATAGGCGCGGACTTACGGGGCCAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCGCACTGTAGTGCTGACTAATAGGCGCGGACTTACGGGGCCAGACTACCACTACTACGGCATGGACGTC	ARERTVVLTNRRGLTGPDYHYYGMDV	289	366	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	70	4	0	94.6
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	17	7	0	70.8
FR3-IMGT	175	288	114	101	13	0	88.6
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	266	29	0	90.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  T  A  S  G  Y  T  F  S  
                    Query_8895   2    AGGTCCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCACGGCCTCTGGGTACACCTTTAGCA  91
V  90.2% (266/295)  IGHV1-18*01  2    ....T.................................................A...........A...T.....T..........C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  S  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  K  N  G  D  T  K  Y  
                    Query_8895   92   GTTATAGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCCAAGAACGGAGACACCAAATATG  181
V  90.2% (266/295)  IGHV1-18*01  92   .C...G.......C.....................................................TT.C..T..TA....A..C....  181
                                      S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      E  Q  K  F  Q  D  R  I  F  L  T  T  E  T  S  T  S  T  A  Y  M  E  V  T  S  L  R  S  D  D  
                    Query_8895   182  AGCAGAAGTTCCAGGACAGAATCTTCCTGACCACAGAGACATCCACGAGCACAGCCTACATGGAGGTGACGAGCCTGAGATCTGACGACA  271
V  90.2% (266/295)  IGHV1-18*01  182  CA......C......G....G..AC.A..........C...........................C...G....................  271
                                      A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  

                                      ----------------><----------------------------------CDR3-IMGT-----------------------------
                                      T  A  V  Y  Y  C  A  R  E  R  T  V  V  L  T  N  R  R  G  L  T  G  P  D  Y  H  Y  Y  G  M  
                    Query_8895   272  CGGCCGTCTATTACTGTGCGAGAGAGCGCACTGTAGTGCTGACTAATAGGCGCGGACTTACGGGGCCAGACTACCACTACTACGGCATGG  361
V  90.2% (266/295)  IGHV1-18*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  V  Y  Y  C  A  R                                                                    
D  84.6% (11/13)    IGHD2-21*02  8    -------------------------------...G...G.....----------------------------------------------  20
J  94.9% (56/59)    IGHJ6*02     4    ---------------------------------------------------------------------.....T..........T....  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8895   362  ACGTCTGGGGCCAAGGGACCACTGTCACCGTCTCCTCA  399
J  94.9% (56/59)    IGHJ6*02     25   ......................G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41761224


Query= Query_173071

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD6-19*01                                                                                           21.8    0.040
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	C	ATAGAAGTGGCTGG	CCGTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACATAGAAGTGGCTGGCCGTTTGATGCTTTCGAGATC	ARHRSGWPFDAFEI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  Y  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_8896   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATTATCACTACTGGAGCTGGATCCGGCAGTCTCCAGGGAAGGGACTGGAG  90
V  93.8% (228/243)  IGHV4-59*01  49   ........................................G.AG.T.......................C.C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  I  Y  N  P  S  L  E  S  R  V  T  I  S  A  D  T  S  K  K 
                    Query_8896   91   TGGATTGGCTATATCTATTACAGTGGGAGCACCATCTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAG  180
V  93.8% (228/243)  IGHV4-59*01  139  ........G.........................A................A.....................T...............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  A  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  R  S  G  W  P  F  D  A 
                    Query_8896   181  CAGTTCTCCCTGAAGCTGAGCGCTGTAACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGACATAGAAGTGGCTGGCCGTTTGATGCT  270
V  93.8% (228/243)  IGHV4-59*01  229  .....................T....G....................G............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  5    ----------------------------------------------------------------....C.........------------  18
J  88.0% (44/50)    IGHJ3*02     1    -----------------------------------------------------------------------------------.......  7

                                      -------->                                  
                                       F  E  I  W  G  Q  G  I  K  V  S  V  S  S  
                    Query_8896   271  TTCGAGATCTGGGGCCAGGGGATAAAGGTCTCCGTCTCTTCAG  313
J  88.0% (44/50)    IGHJ3*02     8    ..T..T...........A....C..T....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_20276

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           391     6e-111
IGHD3-3*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	GGAGAGTCTG	CGATTTCTGGAGTGGTTAT	CCCCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTAC	AREESLRFLEWLSPDY	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	71	4	0	94.7
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	298	8	7	1	0	87.5
Total	N/A	N/A	296	273	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  L  T 
                    Query_8897   3    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTAAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTGACC  92
V  92.2% (273/296)  IGHV1-18*01  1    .....T.....G.........................................G.................T..............T...  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  S  M  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  S  N  I  N  Y 
                    Query_8897   93   AGATATAGTATGTCTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATAGCAACATAAATTAT  182
V  92.2% (273/296)  IGHV1-18*01  91   ..C...G....CAGC....................................................C.......G.T....C...C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  L  L  G  R  V  T  M  T  I  D  T  S  A  N  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_8897   183  GCACAGAAACTCCTGGGCAGAGTCACCATGACCATAGACACATCCGCGAACACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  272
V  92.2% (273/296)  IGHV1-18*01  181  ........G....A....................C..........A...G........................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  E  E  S  L  R  F  L  E  W  L  S  P  D  Y  W  G  Q  G  T  L  V  I 
                    Query_8897   273  ACGGCCGTGTATTATTGTGCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTACTGGGGCCAGGGAACCCTGGTCATC  362
V  92.2% (273/296)  IGHV1-18*01  271  ..............C........A..----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.7% (18/19)    IGHD3-3*01   7    ------------------------------------......T............-----------------------------------  25
J  97.1% (34/35)    IGHJ4*02     9    ------------------------------------------------------------............................C.  38

                                           
                                       V  S
                    Query_8897   363  GTCTC  367
J  97.1% (34/35)    IGHJ4*02     39   .....  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_182640

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           12.2    31   
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAACGCCGGGTC	GGTTAC	AAATCCG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAACGCCGGGTCGGTTACAAATCCGACGGTATGAATGTC	ARDKRRVGYKSDGMNV	230	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	21	3	0	87.5
FR3-IMGT	116	229	114	108	6	0	94.7
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	214	11	0	95.1


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  S  D
                    Query_8898   13   GTCTGGATTCACTTTCAGAAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATTTGGTCTGA  102
V  95.1% (214/225)  IGHV3-33*01  72   ............C.....T..............................................................A....A...  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  D  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_8898   103  TGGAAGTGATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATAGTAAGAACACGTTGTATCTGCAAATGAA  192
V  95.1% (214/225)  IGHV3-33*01  162  .......A.....................................................TCC.........C................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-------------------CDR3-IMGT------------------>     
                                        S  L  R  T  E  D  T  A  V  Y  F  C  A  R  D  K  R  R  V  G  Y  K  S  D  G  M  N  V  W  G
                    Query_8898   193  CAGCCTGAGAACCGAGGACACGGCTGTGTATTTCTGTGCGAGAGATAAACGCCGGGTCGGTTACAAATCCGACGGTATGAATGTCTGGGG  282
V  95.1% (214/225)  IGHV3-33*01  252  ..........G.....................A............---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (6/6)     IGHD5-18*01  15   ----------------------------------------------------------......--------------------------  20
J  95.7% (45/47)    IGHJ6*02     16   -----------------------------------------------------------------------........G.C........  34

                                                                  
                                        Q  G  T  T  V  T  V  S  S 
                    Query_8898   283  CCAAGGGACCACGGTCACCGTCTCCTCA  310
J  95.7% (45/47)    IGHJ6*02     35   ............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_182641

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            277     8e-77
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GAATGAACCCTGAATT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATGAACCCTGAATTC	ARGMNPEF	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	39	12	0	76.5
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	213	36	0	85.5


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  I  F  R  G  H  W  M  T  W  I  R  H  L  P  D  K  G  L  
                    Query_8899  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTCGTGGCCACTGGATGACTTGGATTCGTCACCTTCCAGATAAGGGGCTGC  90
V  85.5% (213/249)  IGHV3-7*01  47   ....................................C....A..A..T.T.......GC...G.C..C..GGC.....GG.........G  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     Q  W  V  A  N  I  K  D  D  G  S  E  E  H  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8899  91   AGTGGGTGGCCAATATAAAGGACGATGGAAGTGAAGAGCACTATGGTGACTCTGTGAAGGGCCGATTCACCATCTCCCGAGACAACGCCC  180
V  85.5% (213/249)  IGHV3-7*01  137  .............C......C.A...........GA.AT......TG..............................A...........A  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                     Q  N  S  L  F  L  Q  M  N  N  L  R  V  E  G  T  A  V  Y  Y  C  A  R  G  M  N  P  E  F  W  
                    Query_8899  181  AGAACTCTCTGTTTTTGCAGATGAACAACCTGAGAGTCGAAGGCACGGCTGTATATTACTGTGCGAGAGGAATGAACCCTGAATTCTGGG  270
V  85.5% (213/249)  IGHV3-7*01  227  .......A....A.C....A.......G........C...G.A.........G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  94.3% (33/35)    IGHJ4*02    14   -------------------------------------------------------------------------------------.....  18

                                                                   
                                     G  Q  G  T  L  V  I  V  S  S  
                    Query_8899  271  GCCAGGGAACCCTGGTCATCGTCTCGTCAG  300
J  94.3% (33/35)    IGHJ4*02    19   ..................C......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_173070

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_8900   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.9% (229/244)  IGHV4-59*01  49   .......................................AG....T..............A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8900   91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.9% (229/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_8900   181  CAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.9% (229/244)  IGHV4-59*01  229  ...................G...........................G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_8900   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_182646

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8901   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (239/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  P  S  K  N 
                    Query_8901   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACCCGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  ....................................................................A.........A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_8901   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  .............A.............................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8901   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_182647

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-3*01                                                                                            35.3    3e-06
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACGATTTTTGGAGTGGTT	GAGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACGATTTTTGGAGTGGTTGAGCATGGACGTG	ARGRFLEWLSMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	23	4	0	85.2
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  N  G  G  S  I  N  T  Y  F  W  S  *  I  R  Q  S  P  G  K  G  L  E 
                    Query_8902   1    ACCCTGTCCCTCACCTGCAGTGTCAACGGTGGCTCCATCAATACTTACTTCTGGAGCTGAATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.8% (224/244)  IGHV4-59*01  49   ...................C....TCT.............G..G.....A.........G.........C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  S  Y  N  P  S  L  T  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8902   91   TGGATTGGCTATATCTACTACAGTGGGACCACCAGTTACAATCCCTCCCTCACGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  91.8% (224/244)  IGHV4-59*01  139  ........G........T..........G.....AC.....C..........A.....................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  F  L  E  W  L  S  M 
                    Query_8902   181  CAGTTTTCCCTGAAGCTGACCTCTGCGACCGCTGCGGACACGGCCGTGTATTACTGCGCGAGAGGACGATTTTTGGAGTGGTTGAGCATG  270
V  91.8% (224/244)  IGHV4-59*01  229  .....C.............G.....T..............................T.......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (18/18)   IGHD3-3*01   6    -----------------------------------------------------------------..................-------  23
J  92.9% (39/42)    IGHJ6*02     21   ---------------------------------------------------------------------------------------...  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_8902   271  GACGTGTGGGGCCAAGGGACCACAGTCATCGTCTCCTCA  309
J  92.9% (39/42)    IGHJ6*02     24   .....C.................G....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_257647

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           382     4e-108
IGHD3-10*01                                                                                           12.2    35    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCCAGC	GGGAGT	GAAAAGTTAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGCAGATCCAGCGGGAGTGAAAAGTTAATTGACTCT	GRSSGSEKLIDS	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	4	2	0	66.7
Total	N/A	N/A	288	266	22	0	92.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  E  A  S  G  Y  T  F  S  N  Y 
                    Query_8903   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAAGTCTCCTGCGAGGCTTCTGGTTACACCTTTAGCAACTAC  91
V  92.4% (266/288)  IGHV1-18*04  7    ..................................................G.........A.....................C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       E  I  S  W  V  R  Q  A  R  G  Q  G  L  E  W  M  G  C  I  S  G  Y  S  G  D  T  E  Y  A  Y 
                    Query_8903   92   GAAATCAGCTGGGTGCGACAGGCCCGTGGACAAGGGCTTGAGTGGATGGGATGCATCAGCGGTTACAGTGGTGACACAGAGTATGCATAC  181
V  92.4% (266/288)  IGHV1-18*04  97   .GT......................C...........................G.......C.....A....A.....A.C......C.G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       Q  F  R  G  R  V  T  M  T  T  D  T  S  A  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_8903   182  CAATTCCGGGGCAGAGTCACCATGACCACAGACACATCCGCGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.4% (266/288)  IGHV1-18*04  187  A.GC...A...............................A..................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  G  R  S  S  G  S  E  K  L  I  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8903   272  GTGTATTACTGTGGCAGATCCAGCGGGAGTGAAAAGTTAATTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.4% (266/288)  IGHV1-18*04  277  .............CG...----------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD3-10*01  17   ------------------------......----------------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    ----------------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_40166

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD2-8*02                                                                                            14.1    9.5   
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGT	TACTGGT	ACCAACGCCAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTC	ARLVTGTNATYGLDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_8904   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAGCTA  90
V  98.3% (284/289)  IGHV5-51*03  6    .................................................................G........................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  R  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_8904   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGAGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ........G..................................T..............................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8904   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ...................................A.........C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  L  V  T  G  T  N  A  T  Y  G  L  D  V  W  G  Q  G  S  K  V  T  V  S  S
                    Query_8904   271  CATGTATTACTGTGCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTCTGGGGCCAAGGGAGCAAGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-8*02   10   ------------------------.......-----------------------------------------------------------  16
J  93.9% (46/49)    IGHJ6*02     14   ------------------------------------------.......A.....................C..C...............  61

                                       
                                       
                    Query_8904   361  A  361
J  93.9% (46/49)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_20273

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           266     2e-73
IGHD2-21*01                                                                                           19.9    0.16 
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-21*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTGTTCCAAT	TGGTGGTTATTGGTAT	CCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTGTTCCAATTGGTGGTTATTGGTATCCCTTCGATCCC	ARDRVPIGGYWYPFDP	252	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	19	5	0	79.2
FR2-IMGT	51	101	51	51	0	0	100
CDR2-IMGT	102	125	24	16	8	0	66.7
FR3-IMGT	126	251	126	104	10	12	82.5
CDR3-IMGT (germline)	252	259	8	8	0	0	100
Total	N/A	N/A	244	209	23	12	85.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  T  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_8905   16   GTGCAGCCTCTGGATTCACTTTCAGTACTTATAGTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATTG  105
V  85.7% (209/244)  IGHV3-30*04  65   ...................C.......GC...GC......................................................AT  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------------FR3-IMGT---
                                      A  Y  D  G  N  T  Y  Y  A  D  S  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  D  
                    Query_8905   106  CATATGATGGCAATACATACTACGCAGACTCCTACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAATTCCAGGGACA  195
V  85.7% (209/244)  IGHV3-30*04  155  ..........A.G..ATA.A...------------.......................A.........................A.A...  232
                                      S  Y  D  G  S  N  K  Y              Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  

                                      -------------------------------------------------------><-------------------CDR3-IMGT-----
                                      T  L  Y  L  Q  V  N  R  L  R  P  E  D  T  A  V  Y  Y  C  A  R  D  R  V  P  I  G  G  Y  W  
                    Query_8905   196  CCCTCTATCTGCAAGTGAACCGCCTGAGACCTGAGGACACCGCTGTCTATTACTGTGCGAGAGATCGTGTTCCAATTGGTGGTTATTGGT  285
V  85.7% (209/244)  IGHV3-30*04  233  .G..G.........A.....A........G..........G.....G.................--------------------------  296
                                      T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                             
D  87.5% (14/16)    IGHD2-21*01  10   ----------------------------------------------------------------------------.......G....C.  23

                                      ------------->                                  
                                      Y  P  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8905   286  ATCCCTTCGATCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  87.5% (14/16)    IGHD2-21*01  24   ..----------------------------------------------  25
J  97.7% (42/43)    IGHJ5*02     9    -----.....C.....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_281341

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           325     3e-91
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         P  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8906   1    GGCCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-21*01  47   ..T.........................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8906   91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCCACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.6% (229/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A.T................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_8906   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  91.6% (229/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8906   271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_237217

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_8907   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_8907   91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_8907   181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_8907   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_40163

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           349     2e-98
IGHD4-17*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GCCA	TGACTACGGTGAC	AACGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGCCATGACTACGGTGACAACGCCTTTGCTTAC	AKGHDYGDNAFAY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8908   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-23*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  N  I  G  G  T  G  G  N  R  V  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_8908   91   AGTGGGTCTCAAATATTGGAGGTACTGGTGGTAACAGAGTCTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  94.8% (236/249)  IGHV3-23*01  137  ...........GC....A.T....G........G..C.TA...............................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  H  D  Y  G  D  N  
                    Query_8908   181  AGAACACGCTCTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAAGGCCATGACTACGGTGACAACG  270
V  94.8% (236/249)  IGHV3-23*01  227  ..........G.........................................A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (13/13)   IGHD4-17*01  1    -------------------------------------------------------------------------.............----  13

                                      ---------->                                  
                                      A  F  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8908   271  CCTTTGCTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  95.5% (42/44)    IGHJ4*02     5    -.....AC.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_320113

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           369     2e-104
IGHD5-18*01                                                                                           14.1    7.8   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGCG	TGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCGTGACCAC	ARGYGPRDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	240	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8909   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (240/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8909   91   TGGATTGGGTATATCTATTACACTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCAGTAGACACGTCCAAGAAC  180
V  98.4% (240/244)  IGHV4-59*01  139  ......................G.............................................A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  R  D  H  W  G 
                    Query_8909   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCGTGACCACTGGGGC  270
V  98.4% (240/244)  IGHV4-59*01  229  ...................G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (40/41)    IGHJ4*02     8    -----------------------------------------------------------------------------....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_8909   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (40/41)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_20270

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            300     8e-84
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTTCTTCCCGGGGTCGC	TTGGGG	N/A	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTTCTTCCCGGGGTCGCTTGGGGCTAT	ARDVLPGVAWGY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  S  Y  W  M  N  W  V  R  Q  G  P  G  R  G  L  
                    Query_8910   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACTTCCTATTGGATGAACTGGGTCCGCCAGGGTCCAGGGAGGGGGCTGG  90
V  88.4% (221/250)  IGHV3-7*01   47   ..........................................G.AG...........G..............C........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  S  E  H  G  G  E  E  R  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_8910   91   AGTGGGTGGCCGCCATAAGCGAACATGGAGGTGAAGAGAGGTATGTGGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  88.4% (221/250)  IGHV3-7*01   137  ...........AA.....AGC..G.....A....GA.ATAC...........T....A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  H  M  N  N  L  R  A  E  D  T  A  T  Y  Y  C  A  R  D  V  L  P  G  V  A  
                    Query_8910   181  AGAATTCATTGTATCTGCACATGAACAACTTGAGAGCCGAGGACACGGCTACATATTACTGTGCGAGAGATGTTCTTCCCGGGGTCGCTT  270
V  88.4% (221/250)  IGHV3-7*01   227  ....C...C..........A.......G.C....................GTG.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  16   ----------------------------------------------------------------------------------------..  17

                                      ------->                                  
                                      W  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8910   271  GGGGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
D  100.0% (6/6)     IGHD3-16*01  18   ....--------------------------------------  21
J  97.4% (37/38)    IGHJ4*02     11   ----...C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_148808

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           305     3e-85
IGHD3-10*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	CCCCTGACGTT	TTACTATACTTCGGGGAG	CCTATCCTAGGTCG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGCCCCTGACGTTTTACTATACTTCGGGGAGCCTATCCTAGGTCGTGCTCTTGATATC	AKAPDVLLYFGEPILGRALDI	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	222	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  D  S  E  V  T  F  T  T  C  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_8911   1    GGTCCCTGAGACTCTCCTGTACAGACTCTGAAGTCACCTTTACCACCTGTGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.2% (222/249)  IGHV3-23*01  47   ....................G...C.....G.T.........G..G..A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  A  S  G  A  N  T  Y  Y  A  D  S  A  K  G  R  F  T  L  S  R  D  N  S  
                    Query_8911   91   AGTGGGTCGCGTCTATTTCTGCGAGTGGTGCTAACACATACTACGCAGACTCCGCGAAGGGCCGGTTCACCCTCTCCAGAGACAATTCCC  180
V  89.2% (222/249)  IGHV3-23*01  137  ........T.AG.....AG..GT.......G..G....................T................A.................A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      Q  N  T  L  L  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  P  D  V  L  L  Y  
                    Query_8911   181  AGAACACACTACTTCTGCAGATGGACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCAAAAGCCCCTGACGTTTTACTATACT  270
V  89.2% (222/249)  IGHV3-23*01  227  .......G..GTA......A...A........................................G....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.9% (16/18)    IGHD3-10*01  4    --------------------------------------------------------------------------------.......GG.  13

                                      DR3-IMGT-------------------------->                                  
                                      F  G  E  P  I  L  G  R  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8911   271  TCGGGGAGCCTATCCTAGGTCGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  339
D  88.9% (16/18)    IGHD3-10*01  14   ........-------------------------------------------------------------  21
J  97.9% (46/47)    IGHJ3*02     4    ----------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_148809

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           408     4e-116
IGHD3-3*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCTCC	TACGAGTTTTGGAGTGGTTCTTAT	GTA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCTCCTACGAGTTTTGGAGTGGTTCTTATGTATACTACGATATGGACGTC	ARASYEFWSGSYVYYDMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	71	4	0	94.7
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	111	3	0	97.4
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	278	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  T  F  I 
                    Query_8912   3    CAGGTTCAGCTGGTGCAGTCTGGAGCCGAAGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCATC  92
V  94.2% (278/295)  IGHV1-69*01  1    .....G.................G..T..G.................................................G........G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  V  S  W  V  R  L  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  L  G  A  P  N  Y 
                    Query_8912   93   AGTTATGGTGTCAGCTGGGTGCGACTGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGAATCATCCCTATCTTAGGTGCACCAAACTAC  182
V  94.2% (278/295)  IGHV1-69*01  91   ..C....C.A...............A.................................G..............T...A..G........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_8912   183  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTCAGATCTGAGGAC  272
V  94.2% (278/295)  IGHV1-69*01  181  .............................................................................G............  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  F  Y  Y  C  A  R  A  S  Y  E  F  W  S  G  S  Y  V  Y  Y  D  M  D  V  W  G  Q  G  T 
                    Query_8912   273  ACGGCCTTTTATTACTGTGCGAGAGCCTCCTACGAGTTTTGGAGTGGTTCTTATGTATACTACGATATGGACGTCTGGGGCCAAGGGACC  362
V  94.2% (278/295)  IGHV1-69*01  271  ......G.G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  91.7% (22/24)    IGHD3-3*01   5    ------------------------------.....T.............A....------------------------------------  28
J  96.1% (49/51)    IGHJ6*02     12   ---------------------------------------------------------.......G.........................  44

                                                        
                                       S  V  T  V  S  S 
                    Query_8912   363  TCGGTCACCGTCTCCTCA  380
J  96.1% (49/51)    IGHJ6*02     45   A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_148800

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           374     8e-106
IGHD5-18*01                                                                                           21.8    0.042 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD5-18*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCTCA	CCGA	ATACAGTTATGGTT	TACCGGTCCCAAAATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCTCACCGAATACAGTTATGGTTTACCGGTCCCAAAATCTTGACTAC	LTEYSYGLPVPKS*L	250	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	30	0	0	100
FR3-IMGT	135	249	115	111	3	1	96.5
CDR3-IMGT (germline)	250	255	6	5	1	0	83.3
Total	N/A	N/A	255	249	5	1	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8913   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.6% (249/255)  IGHV3-15*01  47   .......T..................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  N  Y  G  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_8913   91   AGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAAACTACGGCGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  97.6% (249/255)  IGHV3-15*01  137  ............................................G......CT.....................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT-----------------------------------------------------><-------------------C
                                      D  S  K  K  H  A  V  S  A  N  E  Q  P  E  N  R  G  H  S  R  V  L  L  Y  L  T  E  Y  S  Y  
                    Query_8913   181  ATTCAAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCTCACCGAATACAGTTATG  270
V  97.6% (249/255)  IGHV3-15*01  227  ....-...................................................................A..---------------  300
                                      D  S   K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                
D  92.9% (13/14)    IGHD5-18*01  5    -------------------------------------------------------------------------------......C....  15

                                      DR3-IMGT------------------>                                  
                                      G  L  P  V  P  K  S  *  L  L  G  P  G  N  P  G  H  R  L  L   
                    Query_8913   271  GTTTACCGGTCCCAAAATCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  92.9% (13/14)    IGHD5-18*01  16   ...----------------------------------------------------------  18
J  100.0% (42/42)   IGHJ4*02     7    -------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_148801

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           288     5e-80
IGHD2-8*02                                                                                            19.9    0.16 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGATGCGGCGGAGCGAAATCA	GTACTGGTGG	GG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATGCGGCGGAGCGAAATCAGTACTGGTGGGGACTACTTTGACCGC	ARMRRSEISTGGDYFDR	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  V  P  Y  L  W  S  W  V  R  Q  H  P  V  K  G 
                    Query_8914   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATAAGAAGTGTTCCTTACCTCTGGAGCTGGGTCCGCCAGCACCCAGTGAAGGGC  90
V  87.4% (215/246)  IGHV4-31*03  49   ......................................C..C....G.GG....TA..........A...............G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  Y  M  Y  Y  S  G  S  N  R  Y  N  P  S  L  K  S  R  V  S  M  S  L  D  T  S 
                    Query_8914   91   CTGGAGTGGATTGCATACATGTACTACAGTGGGAGTAATCGCTACAACCCGTCCCTCAAGAGTCGAGTTTCCATGTCGCTAGACACGTCT  180
V  87.4% (215/246)  IGHV4-31*03  139  .............GG.....C..T...........C.CCTA............................A....A..AG...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       R  N  Q  F  S  L  R  L  T  S  M  T  A  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  I  S 
                    Query_8914   181  AGGAACCAGTTCTCCCTAAGGCTGACCTCTATGACGGCCGCGGACACGGCCATCTACTACTGTGCGCGGATGCGGCGGAGCGAAATCAGT  270
V  87.4% (215/246)  IGHV4-31*03  229  .A...............G.A.....G....G....T...............G.G..T.........------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (10/10)   IGHD2-8*02   9    ----------------------------------------------------------------------------------------..  10

                                      MGT-------------------->                                  
                                       T  G  G  D  Y  F  D  R  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_8914   271  ACTGGTGGGGACTACTTTGACCGCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  328
D  100.0% (10/10)   IGHD2-8*02   11   ........--------------------------------------------------  18
J  91.7% (44/48)    IGHJ4*02     1    ----------...........TA.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_148802

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*14                                                                                           332     3e-93
IGHD4-17*01                                                                                           14.1    8.5  
IGHJ5*02                                                                                              37.2    2e-06


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*14	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CGCCTTG	GACTACCATGACT	N/A	ACAGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACGCCTTGGACTACCATGACTACAGCTGTTTCTTCCCC	ARDALDYHDYSCFFP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  T  S  Y  A  M  H  W  V  R  Q  A  P  A  K  G  L  
                    Query_8915   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGCTCACTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGCCAAGGGACTGG  90
V  92.4% (231/250)  IGHV3-30*14  47   .....................................CT...G...................................G......G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  V  A  V  I  T  Y  D  G  T  D  T  Y  Y  T  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_8915   91   AGTGTGTTGCAGTTATCACATATGATGGGACTGATACATACTATACAGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAGACAATTCCA  180
V  92.4% (231/250)  IGHV3-30*14  137  ....G..G........AT..........A.G.A...A......CG........................C....................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  D  A  L  D  Y  H  D  
                    Query_8915   181  AGAACACGCTGTATCTTCAAATGAGCAGCCTGAGACCTGAGGACACGGCTGTGTATTACTGTGCGAGGGACGCCTTGGACTACCATGACT  270
V  92.4% (231/250)  IGHV3-30*14  227  ........................A..........G...............................A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.6% (11/13)    IGHD4-17*01  2    -----------------------------------------------------------------------------......GG.....  14

                                      ---------------->                             
                                      Y  S  C  F  F  P  W  G  R  G  A  L  L  A  V  S
                    Query_8915   271  ACAGCTGTTTCTTCCCCTGGGGCCGGGGAGCCCTCCTCGCCGTCTC  316
J  80.4% (37/46)    IGHJ5*02     1    ...A...G...GA...........A....A....GG..A.......  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_148804

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD1-26*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCATACGCC	GTGGGAG	GAAGGGATACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATACGCCGTGGGAGGAAGGGATACCCCTTGACTAC	AKDHTPWEEGIPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  L  S  R  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8916   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCATGCTTAGCAGATTTGCCATGAGTTGGGTCCGCCAGGCCCCTGGGAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-23*01  47   ............................T.......CCT.......C.A.........C..............T..A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  D  N  T  Y  Y  A  D  S  L  K  G  Q  Y  S  I  S  R  D  S  S  
                    Query_8916   91   AGTGGGTCTCAGGTATCAGCGGAAGTGGTGATAACACATATTATGCAGACTCCTTGAAGGGCCAGTACTCCATCTCCAGAGACAGTTCCA  180
V  90.8% (227/250)  IGHV3-23*01  137  ............C...T..T..T.......G..G......C..C.........G.........G..T.A...............A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  H  T  P  W  E  E  
                    Query_8916   181  AGAACACGCTGTATCTGCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCATACGCCGTGGGAGGAAG  270
V  90.8% (227/250)  IGHV3-23*01  227  ......................G...............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD1-26*01  7    -------------------------------------------------------------------------------.......----  13

                                      ---------------->                                  
                                      G  I  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8916   271  GGATACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_148805

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           343     2e-96
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATGG	GGTTCGAGGA	CACTCGACCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTTCGAGGACACTCGACCGTTTTTGATATC	ARDGVRGHSTVFDI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	231	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  N  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8917   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTAACTCTTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (231/243)  IGHV4-59*08  49   ........................................G....T...AC.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  E  N 
                    Query_8917   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTATAATCCCTCCCTTAAGAGTCGAGTCACCATATCAATAGACACGTCCGAGAAC  180
V  95.1% (231/243)  IGHV4-59*08  139  ......................................C..C........C.....................G...........A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  V  R  G  H  S  T  V 
                    Query_8917   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGATGGGGTTCGAGGACACTCGACCGTT  270
V  95.1% (231/243)  IGHV4-59*08  229  ....................C........C.......................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD3-10*01  11   --------------------------------------------------------------------......G...------------  20
J  93.2% (41/44)    IGHJ3*02     7    -----------------------------------------------------------------------------------------.  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  T  I  I  V  S  S  
                    Query_8917   271  TTTGATATCTGGGGCCAAGGGACAACGATCATCGTCTCTTCAG  313
J  93.2% (41/44)    IGHJ3*02     8    .........................T.G...C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_148806

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARQIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_8918   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.5% (278/291)  IGHV5-51*01  6    ....................................C........................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_8918   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_8918   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  Q  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8918   271  CGTCTATTACTGTGCGAGACAAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.5% (278/291)  IGHV5-51*01  276  .A.G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_8918   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_148807

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           374     8e-106
IGHD1-26*01                                                                                           18.0    0.65  
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGTATGCCGTCC	TGGGAGCTTCTA	GT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTATGCCGTCCTGGGAGCTTCTAGTTGGTTCGACCCC	AKYAVLGASSWFDP	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	263	24	0	91.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  E  P  G  E  S  L  R  I  S  C  R  G  S  G  Y  T  F  I  S  Y
                    Query_8919   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAGAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGCTCTGGGTACACCTTTATTAGTTA  90
V  91.6% (263/287)  IGHV5-51*01  6    ....................C..........A..................A...........A...T.....A....G.....CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  G  M  G  V  I  N  P  G  D  P  E  T  R  Y  N  P
                    Query_8919   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGGGGATGGGGGTCATCAATCCTGGCGACCCTGAGACCAGATACAACCC  180
V  91.6% (263/287)  IGHV5-51*01  96   C.......G..................................T........A.....T.......T...T....T..........G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  L  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  S  L  K  A  S  G  T  A
                    Query_8919   181  GTCCTTCCAAGGCCACGTCACCCTCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCACTGGAGCAGCCTGAAGGCCTCGGGCACCGC  270
V  91.6% (263/287)  IGHV5-51*01  186  ...............G......A.....................G...............G......................A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  K  Y  A  V  L  G  A  S  S  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_8919   271  CATGTATTACTGTGCGAAGTATGCCGTCCTGGGAGCTTCTAGTTGGTTCGACCCCTGGGGCCAGGGAACCCTAGTCATCGTCTCCTCAG  359
V  91.6% (263/287)  IGHV5-51*01  276  .................------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                          
D  91.7% (11/12)    IGHD1-26*01  8    -----------------------------........A...------------------------------------------------  19
J  95.7% (44/46)    IGHJ5*02     6    -------------------------------------------.............................G....C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_194434

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           403     1e-114
IGHD3-22*01                                                                                           27.6    9e-04 
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCGGATC	ACTATGATAGTGGTGGT	C	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCGGATCACTATGATAGTGGTGGTCACTACTACTATAATATGGACGTC	ARVPDHYDSGGHYYYNMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  A  T  N  Y
                    Query_8920   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCGCCACCAACTA  90
V  94.5% (274/290)  IGHV1-69*01  6    ..................G............................................................TT..G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  L  L  I  L  M  F  D  T  P  N  Y  A  Q
                    Query_8920   91   TGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACTGCTCATCCTTATGTTTGATACACCAAACTACGCACA  180
V  94.5% (274/290)  IGHV1-69*01  96   ..C.................................................GG.A......C...C....G....G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  V  S  N  L  R  S  E  D  T  A
                    Query_8920   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGGTGAGCAACCTGAGATCTGAGGACACGGC  270
V  94.5% (274/290)  IGHV1-69*01  186  .............................................................C......G.....................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        V  Y  Y  C  A  R  V  P  D  H  Y  D  S  G  G  H  Y  Y  Y  N  M  D  V  W  G  Q  G  T  T  V
                    Query_8920   271  CGTTTATTACTGTGCGAGAGTTCCGGATCACTATGATAGTGGTGGTCACTACTACTATAATATGGACGTCTGGGGCCAAGGGACCACAGT  360
V  94.5% (274/290)  IGHV1-69*01  276  ...G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  94.1% (16/17)    IGHD3-22*01  6    -----------------------------...........A.....--------------------------------------------  22
J  92.9% (52/56)    IGHJ6*02     7    -----------------------------------------------..........CGG...........................G..  49

                                                   
                                        T  V  S  S 
                    Query_8920   361  CACCGTCTCCTCA  373
J  92.9% (52/56)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_194435

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           360     1e-101
IGHD2-2*01                                                                                            14.1    8.2   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	GACTAA	CAGCTGC	CA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGACAGACTAACAGCTGCCATGACTAC	ARQTNSCHDY	249	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	243	13	0	94.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  D  P  A  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_8921   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCATCTTCAGTGACCCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  94.9% (243/256)  IGHV3-73*01  47   .........A..........................C........G.T..........................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  H  I  R  S  E  A  R  S  Y  E  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_8921   91   AGTGGGTTGGCCATATTAGAAGCGAAGCTAGAAGTTACGAGACAGCATATGCTGCGTCGGTGAAGGGCAGGTTCACCATCTCCAGAGATG  180
V  94.9% (243/256)  IGHV3-73*01  137  ............G..........A......AC.......C........................A.........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--
                                      D  S  K  N  T  V  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  Q  T  N  S  C  
                    Query_8921   181  ATTCAAAGAACACGGTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTATTGTGCTAGACAGACTAACAGCTGCC  270
V  94.9% (243/256)  IGHV3-73*01  227  ...............C................................................C...A.......--------------  302
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (7/7)     IGHD2-2*01   19   ----------------------------------------------------------------------------------.......-  25

                                      ------->                                  
                                      H  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_8921   271  ATGACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  312
J  97.6% (40/41)    IGHJ4*02     8    -.......................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_138478

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           244     7e-67
IGHD3-16*01                                                                                           14.1    8.8  
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGGAGGGGGCTTCGGGACAGA	ATTATGA	CGGACGACGGGGGACTCTGTC	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGGAGGGGGCTTCGGGACAGAATTATGACGGACGACGGGGGACTCTGTCCGTC	ARLEGASGQNYDGRRGTLSV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	87	27	0	76.3
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	199	43	0	82.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  S  F  Y  W  G  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_8922   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCAATCAGTAGTTTTTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGCCTGGAG  90
V  82.2% (199/242)  IGHV4-59*08  49   ...............................G...C..........AC......A..........G...C.............A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  A  V  S  Y  R  G  S  T  S  S  N  P  S  L  R  G  R  V  T  L  F  V  G  P  S  N  N 
                    Query_8922   91   TGGGTTGGGGCCGTCTCTTATAGAGGGAGCACCTCCTCCAATCCGTCCCTCAGGGGTCGAGTCACCTTATTTGTGGGCCCGTCCAATAAT  180
V  82.2% (199/242)  IGHV4-59*08  139  ...A.....TATA...A...C..T.........AA..A...C..C.......A.A...........A...CA..A.A.A.......G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  V  S  L  E  V  R  S  V  T  A  A  D  S  A  I  Y  Y  C  A  R  L  E  G  A  S  G  Q  N  Y 
                    Query_8922   181  CAAGTTTCCCTGGAAGTGAGGTCTGTGACCGCCGCAGACAGCGCCATTTACTACTGTGCGAGGCTGGAGGGGGCTTCGGGACAGAATTAT  270
V  82.2% (199/242)  IGHV4-59*08  229  ..GT.C......A.GC....C...................CG...G.G..T...........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------------------------.....  7

                                      GT------------------------>                                 
                                       D  G  R  R  G  T  L  S  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8922   271  GACGGACGACGGGGGACTCTGTCCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
D  100.0% (7/7)     IGHD3-16*01  8    ..----------------------------------------------------------  9
J  100.0% (37/37)   IGHJ6*02     26   -----------------------.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_194437

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           325     3e-91
IGHD3-22*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGGGGGG	TTACTAC	GCATC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGGGGTTACTACGCATCCTACTTTGACTAC	ARMGGYYASYFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8923   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (228/248)  IGHV3-48*03  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  I  S  Y  I  S  G  S  G  S  D  M  R  Y  A  D  S  V  E  G  R  F  I  I  S  R  D  N  G  
                    Query_8923   91   AGTATATTTCATACATTAGCGGGAGTGGCAGTGACATGAGGTACGCAGACTCTGTGGAGGGCCGATTCATCATCTCCAGAGACAACGGCA  180
V  91.9% (228/248)  IGHV3-48*03  137  ...GGG.............TA.T.....T...AC...ATAC...............A............C.................C..  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  W  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  M  G  G  Y  Y  A  S  
                    Query_8923   181  AGAACTGGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCTGTGTATTACTGTGCGAGAATGGGGGGTTACTACGCATCCT  270
V  91.9% (228/248)  IGHV3-48*03  227  ......CA................................G...........T...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-22*01  25   ----------------------------------------------------------------------------.......-------  31
J  100.0% (45/45)   IGHJ4*02     2    ----------------------------------------------------------------------------------------..  3

                                      ---------->                                
                                      Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8923   271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  313
J  100.0% (45/45)   IGHJ4*02     4    ...........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_194431

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           297     8e-83
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCACCGGTGG	AGCAATGGCTGG	GGAACATACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCACCGGTGGAGCAATGGCTGGGGAACATACTATAATTACGGTATGGACGCC	ARGHRWSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	21	3	6	70
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	221	21	6	89.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  T  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_8924   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGCCCTTCACTGACAGTGGTTATTATTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  89.1% (221/248)  IGHV4-34*12  49   .......................C..T......T......------.......C..C....G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  I  D  T  S 
                    Query_8924   91   CTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAACCCGTCCCTCCAGAGTCGAGTCACCATATCAATAGACACGTCC  180
V  89.1% (221/248)  IGHV4-34*12  133  .....G.............T.......AG.....G......................A....................G...........  222
                                       L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  W  S  N  G 
                    Query_8924   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGGGGCCACCGGTGGAGCAATGGC  270
V  89.1% (221/248)  IGHV4-34*12  223  ....................GC............C........................C........----------------------  290
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_8924   271  TGGGGAACATACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  93.8% (45/48)    IGHJ6*02     15   ------------------.............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_194432

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           347     7e-98
IGHD3-16*02                                                                                           19.9    0.16 
IGHJ6*02                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACGACCCAT	GTTTGGGTGAATTATC	N/A	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACGACCCATGTTTGGGTGAATTATCACTTCTACTACGGTATGGACGTC	ARTTHVWVNYHFYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  F  S  S  F  D  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8925   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCTTCAGTAGTTTTGATATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-48*03  47   ...................................A............A...A.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  S  I  R  S  S  S  D  T  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8925   91   AGTGGATTTCATCCATTCGTAGTAGTAGTGATACCACATTCTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (235/248)  IGHV3-48*03  137  .....G......A....A........G..AG.....T..A..................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  T  T  H  V  W  V  N  
                    Query_8925   181  AGAACTCACTGTATCTGCAATTAAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAACGACCCATGTTTGGGTGAATT  270
V  94.8% (235/248)  IGHV3-48*03  227  ....................A.G.............................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD3-16*02  14   -----------------------------------------------------------------------------.......G..G..  26

                                      IMGT--------------------->                                 
                                      Y  H  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8925   271  ATCACTTCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  87.5% (14/16)    IGHD3-16*02  27   ...--------------------------------------------------------  29
J  98.2% (55/56)    IGHJ6*02     7    ---...A....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_194433

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           319     2e-89
IGHD1-7*01                                                                                            14.1    8.5  
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCAGTTT	GAACTAC	GGCCTTGGTGCAG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCAGTTTGAACTACGGCCTTGGTGCAGTTTTGATATT	ARHQFELRPWCSFDI	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	102	12	0	89.5
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  N  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_8926   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAATTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  90.8% (227/250)  IGHV4-39*01  50   .....TCC...A................................A...G.......................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  Y  T  G  L  T  Y  Y  T  P  S  H  E  S  R  L  T  I  S  V  D  T  S  
                    Query_8926   94   TGGAGTGGATTGGGAGCATCTATTATACTGGGCTCACCTACTACACCCCGTCCCACGAGAGTCGACTCACCATATCCGTGGACACGTCCA  183
V  90.8% (227/250)  IGHV4-39*01  140  ................T..........G....AG...........A........T.A........G.............A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  Q  F  S  L  S  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Q  F  E  L  R  P  
                    Query_8926   184  GAAACCAGTTCTCCCTGAGCCTCAGCTCTGTGACCGCCGCAGATACGGCTGTATATTACTGTGCGAGACATCAGTTTGAACTACGGCCTT  273
V  90.8% (227/250)  IGHV4-39*01  230  AG................AG..G....................C........G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-7*01   11   -----------------------------------------------------------------------------.......------  17

                                      ---------------->                                  
                                      W  C  S  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8926   274  GGTGCAGTTTTGATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
J  97.7% (43/44)    IGHJ3*02     7    -------.........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_138472

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           343     2e-96
IGHD4-17*01                                                                                           14.1    8.6  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTGTC	CGGCGACTAC	CTTCCGTACATAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTGTCCGGCGACTACCTTCCGTACATACACTGGTTCGACCCC	ARHVSGDYLPYIHWFDP	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  A  N  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_8927   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACCAGTGCTAATTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGC  90
V  93.6% (235/251)  IGHV4-39*01  49   ........................................G....AG..G.........................C.............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  Y  R  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8927   91   CTGGAGTGGATTGGGACTATCTATTATCGTGGGAGTACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCCGTAGACACGTCC  180
V  93.6% (235/251)  IGHV4-39*01  139  ................G..........A.......C......................................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       N  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  V  S  G  D  Y  L 
                    Query_8927   181  AACAACCAATTTTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTCTACTATTGTGCGAGACATGTGTCCGGCGACTACCTT  270
V  93.6% (235/251)  IGHV4-39*01  229  ..G.....G..C.........................................G..T..C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD4-17*01  7    -----------------------------------------------------------------------------...T......---  16

                                      MGT-------------------->                                  
                                       P  Y  I  H  W  F  D  P  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_8927   271  CCGTACATACACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  328
J  97.9% (47/48)    IGHJ5*02     4    ----------...................................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_138470

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_8928   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTA  90
V  97.6% (282/289)  IGHV5-51*03  6    ..............................................................................C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_8928   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  97.6% (282/289)  IGHV5-51*03  96   .......................................................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8928   181  GTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  ........................C....C....A..................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8928   271  CATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  97.6% (282/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (15/15)   IGHD6-19*01  4    ----------------------------------...............----------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   ----------------------------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_138471

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            341     5e-96
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCCACCCGAAAA	TATGACAGTAGTGATTATT	CCTCCCACCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCACCCGAAAATATGACAGTAGTGATTATTCCTCCCACCTCTTTGACTAC	STRKYDSSDYSSHLFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	108	6	0	94.7
Total	N/A	N/A	240	229	11	0	95.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  T  N  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_8929   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTACTAACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.4% (229/240)  IGHV4-4*02   49   ..............................................G...........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  R  G  G  S  P  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  K 
                    Query_8929   91   GAGTGGATTGGGGAAATCTATCGTGGTGGGAGCCCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCACTAGACAAGTCCAAA  180
V  95.4% (229/240)  IGHV4-4*02   139  ......................A.A........A.....................................A...G.............G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  S  T  R  K  Y  D  S  S  D  Y 
                    Query_8929   181  AACCAGTTCTCCCTGCGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTTCCACCCGAAAATATGACAGTAGTGATTAT  270
V  95.4% (229/240)  IGHV4-4*02   229  ...............AA.....G.....................................------------------------------  288
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  89.5% (17/19)    IGHD3-22*01  8    ------------------------------------------------------------------------.....T.......G....  25

                                      -------------------->                                  
                                       S  S  H  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8929   271  TCCTCCCACCTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  89.5% (17/19)    IGHD3-22*01  26   .------------------------------------------------------  26
J  100.0% (44/44)   IGHJ4*02     5    -----------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_138476

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     2e-90
IGHD3-10*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCGGAGGTTCC	ACTATGG	CCACCTGACACCAC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCGGAGGTTCCACTATGGCCACCTGACACCACTTGAGTAC	ASRRFHYGHLTPLEY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	224	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  N  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_8930   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAACTGGGTCCGCCAGACCCCAGGGAGGGGGCTGGAG  90
V  92.6% (224/242)  IGHV4-34*01  49   .......................................................G....A........C.........A..........  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  V  N  H  S  G  N  S  N  S  N  P  S  L  K  S  R  V  T  I  L  V  D  T  S  K  N 
                    Query_8930   91   TGGCTTGGGGAAGTCAATCATAGTGGCAACAGCAACTCCAACCCGTCCCTCAAGAGTCGAGTCACCATATTAGTCGACACGTCCAAGAAC  180
V  92.6% (224/242)  IGHV4-34*01  139  ...A........A.............A.G..C.....A................................C...A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  S  R  R  F  H  Y  G  H  L  T 
                    Query_8930   181  CAGTTCTCCCTGAAACTGACTTCTGTGACCGCCGCGGACACGGCTCTTTATTATTGTGCGAGTCGGAGGTTCCACTATGGCCACCTGACA  270
V  92.6% (224/242)  IGHV4-34*01  229  ..............G....GC........................G.G.....C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD3-10*01  6    -------------------------------------------------------------------------.......----------  12

                                      ----------->                                  
                                       P  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8930   271  CCACTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.6% (41/42)    IGHJ4*02     7    ----....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_25522

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTTTGTGG	TACTCTGGTTCGGGGAGT	AATACCCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTTGTGGTACTCTGGTTCGGGGAGTAATACCCGTTTTGACTAC	ARALWYSGSGSNTRFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_8931   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.2% (243/250)  IGHV4-31*03  49   ...............................G.............................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  T  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8931   91   CTGGAGTGGATTGGATACATCTATTACAGTGGGAGCACCTACTACACCCCGTCCCTCAAGAGTCGAGTTACCATTTCAGTCGACACGTCT  180
V  97.2% (243/250)  IGHV4-31*03  139  ..............G...............................A...........................A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  P  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  L  W  Y  S  G  S 
                    Query_8931   181  AAGAACCAGTTCTCCCCGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTTTGTGGTACTCTGGTTCG  270
V  97.2% (243/250)  IGHV4-31*03  229  ................T.....................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  5    ------------------------------------------------------------------------------....A.......  16

                                      MGT-------------------->                                  
                                       G  S  N  T  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8931   271  GGGAGTAATACCCGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  94.4% (17/18)    IGHD3-10*01  17   ......----------------------------------------------------  22
J  100.0% (43/43)   IGHJ4*02     6    ---------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_138474

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           305     3e-85
IGHD3-10*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	CCCCTGACGTT	TTACTATACTTCGGGGAG	CCTATCCTAGGTCG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGCCCCTGACGTTTTACTATACTTCGGGGAGCCTATCCTAGGTCGTGCTCTTGATATC	AKAPDVLLYFGEPILGRALDI	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	222	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  D  S  E  V  T  F  T  T  C  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_8932   1    GGTCCCTGAGACTCTCCTGTACAGACTCTGAAGTCACCTTTACCACCTGTGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.2% (222/249)  IGHV3-23*01  47   ....................G...C.....G.T.........G..G..A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  A  S  G  A  N  T  Y  Y  A  D  S  A  K  G  R  F  T  L  S  R  D  N  S  
                    Query_8932   91   AGTGGGTCGCGTCTATTTCTGCGAGTGGTGCTAACACATACTACGCAGACTCCGCGAAGGGCCGGTTCACCCTCTCCAGAGACAATTCCC  180
V  89.2% (222/249)  IGHV3-23*01  137  ........T.AG.....AG..GT.......G..G....................T................A.................A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      Q  N  T  L  L  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  P  D  V  L  L  Y  
                    Query_8932   181  AGAACACACTACTTCTGCAGATGGACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCAAAAGCCCCTGACGTTTTACTATACT  270
V  89.2% (222/249)  IGHV3-23*01  227  .......G..GTA......A...A........................................G....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.9% (16/18)    IGHD3-10*01  4    --------------------------------------------------------------------------------.......GG.  13

                                      DR3-IMGT-------------------------->                                  
                                      F  G  E  P  I  L  G  R  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_8932   271  TCGGGGAGCCTATCCTAGGTCGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  339
D  88.9% (16/18)    IGHD3-10*01  14   ........-------------------------------------------------------------  21
J  97.9% (46/47)    IGHJ3*02     4    ----------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_138475

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           386     2e-109
IGHD7-27*01                                                                                           12.2    36    
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD7-27*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	CTGGGG	CCTCGGATTCCAATTTCCT	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGGGGCCTCGGATTCCAATTTCCTCTATTACTATGGAATGGACGTC	ATGASDSNFLYYYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	267	20	0	93


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  R  Y
                    Query_8933   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGGTA  90
V  93.0% (267/287)  IGHV1-69*01  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  G  I  I  T  A  F  G  T  T  E  Y  G  Q
                    Query_8933   91   TGCCATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCAGGGATCATCACTGCCTTTGGAACAACAGAGTACGGACA  180
V  93.0% (267/287)  IGHV1-69*01  96   ...T..............................................G..........C..AT......T...G..A.C....C...  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  A  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  E  D  T  A
                    Query_8933   181  GAAGTTCCAGGGCAGAGCGACGATTACCGCGGACGAATCAACGAGCACAGCCTATATGGAGCTGCGCAGTCTGAGATCTGAAGACACGGC  270
V  93.0% (267/287)  IGHV1-69*01  186  .................TC....................C..............C.........A....C...........G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        A  Y  Y  C  A  T  G  A  S  D  S  N  F  L  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_8933   271  CGCGTATTACTGTGCGACTGGGGCCTCGGATTCCAATTTCCTCTATTACTATGGAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  93.0% (267/287)  IGHV1-69*01  276  ..T..............-------------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                           
D  100.0% (6/6)     IGHD7-27*01  5    -----------------......-------------------------------------------------------------------  10
J  94.5% (52/55)    IGHJ6*02     8    ------------------------------------------...C.....C..T...................................  55

                                             
                                        S  S 
                    Query_8933   361  CTCCTCA  367
J  94.5% (52/55)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_318363

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACAGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACAGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8934   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.6% (225/243)  IGHV4-34*01  49   ................................G...T..................G...........................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  L  S  L  D  M  S  K  K 
                    Query_8934   91   TGGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGCGTCTCCTTATCATTAGACATGTCCAAGAAG  180
V  92.6% (225/243)  IGHV4-34*01  139  .............................C..................C..A.......A...A..A.....G......C.........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  V  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y 
                    Query_8934   181  CAGTTCTCCGTGAAGGTGACGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAACAGTAAAGGGGGTTATTACTGTCTAC  270
V  92.6% (225/243)  IGHV4-34*01  229  .........C.....C...GC..........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  20   --------------------------------------------------------------------------..........------  29

                                      -------------------->                                 
                                       Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8934   271  CAGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  100.0% (40/40)   IGHJ6*02     23   --------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_318360

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD5-12*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCTGCTATCGGATACTTT	GTGGCTTCGATT	CGGGTGAGGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTGCTATCGGATACTTTGTGGCTTCGATTCGGGTGAGGGCATGGACGTC	ARLCYRILCGFDSGEGMDV	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  S  T  N  F  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_8935   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGGAGTACTAATTTCTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.4% (236/250)  IGHV4-39*01  49   ...............................G.........C....G..G..A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  I  R  V  T  I  S  I  N  T  T 
                    Query_8935   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGACCACCTACTACAACCCGTCCCTCAAGATTCGAGTCACCATATCCATAAACACGACC  180
V  94.4% (236/250)  IGHV4-39*01  139  ..................................G..........................G................G..G.....T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  D  H  F  S  R  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  C  Y  R  I  L  C 
                    Query_8935   181  AAGGACCATTTCTCCCGGAAGCTGACCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACTCTGCTATCGGATACTTTGT  270
V  94.4% (236/250)  IGHV4-39*01  229  ...A....G.......T........G............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD5-12*01  10   ----------------------------------------------------------------------------------------..  11

                                      3-IMGT----------------------->                                 
                                       G  F  D  S  G  E  G  M  D  V  W  G  L  G  T  T  V  T  V  S  S 
                    Query_8935   271  GGCTTCGATTCGGGTGAGGGCATGGACGTCTGGGGCCTAGGGACCACCGTCACCGTCTCCTCA  333
D  91.7% (11/12)    IGHD5-12*01  12   ....A.....-----------------------------------------------------  21
J  95.2% (40/42)    IGHJ6*02     21   ---------------------................A.........G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_318361

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           346     2e-97
IGHD2-15*01                                                                                           39.1    3e-07
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	T	GGATATTGTCGTGGTGGTGCCTGCTACTC	AACGGGTCGGGGGACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGATATTGTCGTGGTGGTGCCTGCTACTCAACGGGTCGGGGGACTTTTGACTAC	ARHGYCRGGACYSTGRGTFDY	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  S  T  H  H  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_8936   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGACTCCATCAGTAGCAGTACTCACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.0% (236/251)  IGHV4-39*01  49   .............................T.G.........C..T....G.T..T...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  V  Y  Y  S  G  R  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8936   91   CTGGAGTGGATTGGGAGTGTCTATTATAGTGGGAGAACCTACGACAACCCGTCTCTCAAGAGTCGAGTCACCATATCTGTCGACACGTCC  180
V  94.0% (236/251)  IGHV4-39*01  139  ..................A................C......T..........C.......................C..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  H  G  Y  C  R  G  G 
                    Query_8936   181  AAGAATCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTTTTACTGTGCGAGACATGGATATTGTCGTGGTGGT  270
V  94.0% (236/251)  IGHV4-39*01  229  .....C.................................................A...............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.7% (26/29)    IGHD2-15*01  2    ------------------------------------------------------------------------.........A........  19

                                      CDR3-IMGT-------------------------->                                  
                                       A  C  Y  S  T  G  R  G  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8936   271  GCCTGCTACTCAACGGGTCGGGGGACTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  89.7% (26/29)    IGHD2-15*01  20   AG.........-----------------------------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_318366

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           330     1e-92
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  A  L  E 
                    Query_8937   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGCACTGGAG  90
V  93.1% (228/245)  IGHV4-59*08  49   ...........................................G......................................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  F  Y  T  G  T  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8937   91   TGGATCGGGTCTATCTTTTACACTGGGACCACCAACTACGACCCCTCTCTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGAAC  180
V  93.1% (228/245)  IGHV4-59*08  139  .....T....A.....A.....G.....G..........A.......C....................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  V  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  H  R  A  A  A  G  P 
                    Query_8937   181  CAGTTCTCCCTGAGAGTGACCTCTCTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATCCCCATAGAGCAGCAGCTGGCCCC  270
V  93.1% (228/245)  IGHV4-59*08  229  .............AGC...G....G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD6-13*01  7    --------------------------------------------------------------------------............----  18
J  93.2% (41/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_8937   271  TTTGACAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  313
J  93.2% (41/44)    IGHJ4*02     6    ......T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_318364

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         346     2e-97
IGHD5-12*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGAGGAT	TGGCTACGA	GACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGACCCCCTTTGACCTC	ARAGRIGYETPFDL	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_8938     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTACTCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  94.7% (234/247)  IGHV4-38-2*02  49   ................................................T.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  C  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K 
                    Query_8938     91   GAGTGGATTGGGAGTATCTGTCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAG  180
V  94.7% (234/247)  IGHV4-38-2*02  139  ...................A..A.........C.........A..............A........................C.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  Q  F  S  L  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  T 
                    Query_8938     181  AACCAGTTCTCGTTGAATCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGAGCGGGGAGGATTGGCTACGAGACC  270
V  94.7% (234/247)  IGHV4-38-2*02  229  ...........CC....G....G...........C...............G................-----------------------  295
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD5-12*01    11   -----------------------------------------------------------------------------.........----  19

                                        ----------->                                  
                                         P  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8938     271  CCCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.5% (42/44)    IGHJ4*02       5    --.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_318365

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGTCCCGACTGAACTACGGCATGGACGTC	ARLMSRLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  S  N  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_8939   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATCAGCAATTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G.........T.G................A............................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8939   91   TGGATTGAGTACATCTATTACAGGGGGAGTCCCAATAACGACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G...T...........T.....CA....CT..A..................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_8939   181  CAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTAATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  .............A.C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  96.0% (48/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8939   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  309
J  96.0% (48/50)    IGHJ6*02     24   ...................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_137024

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         319     2e-89
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	CC	TACTATGA	CAGAAGGGGGTTTC	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGCCTACTATGACAGAAGGGGGTTTCATGGTTTTGATATC	ARAYYDRRGFHGFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	26	25	24	1	0	96
CDR1-IMGT	27	56	30	28	2	0	93.3
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	18	3	0	85.7
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                        <-------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT------
                                          L  S  L  T  C  A  V  S  S  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  H  P  P  G  K  G  L
                    Query_8940     2    CCTGTCCCTCACCTGCGCTGTCTCTAGTGGCTCCATTAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCACCCCCCAGGGAAGGGCCT  91
V  91.1% (226/248)  IGHV4-30-4*01  51   ................A........G..........C...................................G.................  140
                                          L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L

                                        ---------------><-----CDR2-IMGT-----><----------------------------------------------------
                                          E  W  I  G  Y  I  D  N  S  G  R  T  Y  Y  S  P  A  L  K  S  R  A  F  M  S  I  D  T  S  K
                    Query_8940     92   GGAGTGGATTGGTTACATCGATAACAGTGGGAGGACCTACTACAGCCCGGCCCTCAAGAGTCGAGCTTTCATGTCGATAGACACGTCCAA  181
V  91.1% (226/248)  IGHV4-30-4*01  141  ............G......T..T..........C..........A....T...............T.AC...A..AG.............  230
                                          E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K

                                        FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT--
                                          N  Q  F  P  L  T  L  R  S  V  T  A  A  D  T  A  K  Y  Y  C  A  R  A  Y  Y  D  R  R  G  F
                    Query_8940     182  GAACCAGTTCCCCCTGACCCTGAGGTCTGTGACTGCCGCAGACACGGCCAAGTATTACTGTGCCAGAGCCTACTATGACAGAAGGGGGTT  271
V  91.1% (226/248)  IGHV4-30-4*01  231  ..........T......AG.....C........................GT.................----------------------  298
                                          N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                        
D  100.0% (8/8)     IGHD3-22*01    5    ----------------------------------------------------------------------........------------  12

                                        --------------->                                  
                                          H  G  F  D  I  W  G  P  G  T  V  V  T  V  S  S  
                    Query_8940     272  TCATGGTTTTGATATCTGGGGCCCAGGGACAGTGGTCACCGTCTCTTCAG  321
J  93.8% (45/48)    IGHJ3*02       3    --...C.................A.......A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_318369

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD3-16*02                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTATCG	ACATTGGTTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTATTTGACTAT	ARHYRHWLFDY	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	238	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  L  T  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_8941   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCCTCACCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (238/251)  IGHV4-39*01  49   ...............................G....A...G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_8941   91   CTGGAGTGGATTGGGAGTTTGTATTATAGCGGCAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  94.8% (238/251)  IGHV4-39*01  139  ..................A.C........T..G...............................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  H  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  H  W  L  F 
                    Query_8941   181  AAGAACCACTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATTATCGACATTGGTTATTT  270
V  94.8% (238/251)  IGHV4-39*01  229  ........G..C........G....G...T.........................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-16*02  25   -----------------------------------------------------------------------......-------------  30
J  97.7% (42/43)    IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8941   271  GACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  97.7% (42/43)    IGHJ4*02     9    .....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_253051

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         329     3e-92
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	CGACCCCAAGGCCAAAGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACCCCAAGGCCAAAGCCTTGACTAC	ARRPQGQSLDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  A  F  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8942     1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTCAGTAATTATGCTTTCCACTGGGTCCGCCAGGCCCCAGGCAAGGGGCTGG  90
V  92.3% (229/248)  IGHV3-30-3*01  47   .....................C.......................GC......A.G.................T................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  V  G  G  N  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8942     91   AGTGGGTGGCGGTTATATCATATGTTGGAGGCAATAAAAATTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.3% (229/248)  IGHV3-30-3*01  137  ..........A.............A....A........T.C..C.C............................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                        K  N  T  L  F  L  E  M  N  S  L  R  P  D  D  T  A  V  Y  Y  C  A  R  R  P  Q  G  Q  S  L  
                    Query_8942     181  AGAACACGCTGTTTCTGGAAATGAACAGCCTGAGACCTGACGACACGGCTGTCTACTACTGTGCGAGACGACCCCAAGGCCAAAGCCTTG  270
V  92.3% (229/248)  IGHV3-30-3*01  227  ............A....C.................G....G...........G..T............----------------------  294
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  97.6% (41/42)    IGHJ4*02       7    ---------------------------------------------------------------------------------------...  9

                                        ---->                                  
                                        D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_8942     271  ACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  309
J  97.6% (41/42)    IGHJ4*02       10   ...........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_145986

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           367     6e-104
IGHD2-8*01                                                                                            41.1    7e-08 
IGHJ2*01                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD2-8*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	CGTACG	AGGATTTTGTACTAATGGTGTTTGCTTTAC	GGGG	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACCGTACGAGGATTTTGTACTAATGGTGTTTGCTTTACGGGGTGGTACTTCGATCTC	TTVRGFCTNGVCFTGWYFDL	249	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	112	2	0	98.2
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	244	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  N  N  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_8943   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACTTTCAATAATGCCTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (244/253)  IGHV3-15*01  47   .......T............G.....................G...C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  I  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_8943   91   AGTGGGTTGGTCGTATTAAAAGCAAAATTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  96.4% (244/253)  IGHV3-15*01  137  ..........C................C..............................................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  V  R  G  F  C  
                    Query_8943   181  ATTCAAAAAATACGCTCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACCGTACGAGGATTTTGTA  270
V  96.4% (244/253)  IGHV3-15*01  227  ..........C.....G........................................................-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  90.0% (27/30)    IGHD2-8*01   1    -------------------------------------------------------------------------------.....A.....  11

                                      ----CDR3-IMGT------------------------>                                  
                                      T  N  G  V  C  F  T  G  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_8943   271  CTAATGGTGTTTGCTTTACGGGGTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  342
D  90.0% (27/30)    IGHD2-8*01   12   ..........A....A...-----------------------------------------------------  30
J  100.0% (49/49)   IGHJ2*01     5    -----------------------.................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_145984

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           288     5e-80
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ5*02                                                                                              46.8    3e-09


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCGACGCGAGAGG	ACTATGATAGGAGTGGTTATT	CCTCCG	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATTCGACGCGAGAGGACTATGATAGGAGTGGTTATTCCTCCGCC	VRDSTREDYDRSGYSSA	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  R  D  Y  F  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_8944   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGGGACTACTTCATGACTTGGATCCGGCAGGCTCCAGGGAAGGGACTGG  90
V  86.8% (217/250)  IGHV3-11*06  47   ....................................C......T.......A.....GC........C.................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  L  R  G  S  Y  S  N  T  A  D  S  V  R  G  R  F  I  T  S  R  D  N  D  
                    Query_8944   91   AGTGGGTTTCATCCATAAGTCTTAGGGGCTCTTACTCAAACACCGCAGACTCTGTGAGGGGCCGATTCATCACCTCCAGAGACAACGACA  180
V  86.8% (217/250)  IGHV3-11*06  137  ............A...T...AG...TA.TAG....A.....TA..............A...........C..T..............C..  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  R  S  M  Y  L  Q  M  N  N  V  R  A  E  D  T  A  V  Y  Y  C  V  R  D  S  T  R  E  D  Y  
                    Query_8944   181  AGAGGTCAATGTACCTGCAAATGAACAATGTGAGAGCCGAAGACACGGCTGTATATTACTGTGTGAGAGATTCGACGCGAGAGGACTATG  270
V  86.8% (217/250)  IGHV3-11*06  227  ...AC...C....T.............GCC..........G...........G..........C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.2% (20/21)    IGHD3-22*01  6    ------------------------------------------------------------------------------------......  11

                                      GT-------------------->                                  
                                      D  R  S  G  Y  S  S  A  W  G  Q  G  A  L  V  P  V  S  S  
                    Query_8944   271  ATAGGAGTGGTTATTCCTCCGCCTGGGGCCAGGGGGCCCTGGTCCCCGTCTCTTCAG  327
D  95.2% (20/21)    IGHD3-22*01  12   ....T..........------------------------------------------  26
J  88.9% (32/36)    IGHJ5*02     16   ---------------------.............AA........A.......C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_145985

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            18.0    0.58 
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGC	TACGATTTT	GGGTCATTGTGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGCTACGATTTTGGGTCATTGTGGTGGTTCGACCCC	ARGRYDFGSLWWFDP	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	24	15	6	3	62.5
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	249	232	14	3	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8945   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCATATTCAGTAACTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-21*01  47   ............................T.......CC.......G......C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  M  S  G  S  S  S     S  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8945   91   AGTGGGTCTCATCCATGAGTGGAAGCAGTAGT---AGTTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  177
V  93.2% (232/249)  IGHV3-21*01  137  ................T...A.T..T......TAC.TA....................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  V  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  R  Y  D  F  G  S  
                    Query_8945   178  AGAACTCACTGGTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGGTCGCTACGATTTTGGGTCAT  267
V  93.2% (232/249)  IGHV3-21*01  227  ...........TA.......................................G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD3-3*01   5    --------------------------------------------------------------------------.........-------  13

                                      ---------------->                                  
                                      L  W  W  F  D  P  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_8945   268  TGTGGTGGTTCGACCCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  97.8% (45/46)    IGHJ5*02     6    -----.........................C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_145983

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8946   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8946   91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........GT........T.......G...............................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_8946   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.1% (233/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8946   271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_145980

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           357     1e-100
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	VRGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_8947   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.6% (239/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_8947   91   CTCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  95.6% (239/250)  IGHV4-31*03  139  ..G...............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  V  R  G  H  S  Y  G  S  G 
                    Query_8947   181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGTGAGAGGCCACTCCTATGGTTCGGGG  270
V  95.6% (239/250)  IGHV4-31*03  229  .........................G................................A.....C.....--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8947   271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_145981

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD2-2*01                                                                                            14.1    8.6   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCCCCA	CTATGCC	TATTCCAGCGGGGGATATG	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCCCCACTATGCCTATTCCAGCGGGGGATATGTTGAGTCC	ARGPHYAYSSGGYVES	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  T  W  I  R  Q  H  P  G  K  A 
                    Query_8948   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGCC  90
V  96.8% (242/250)  IGHV4-31*03  49   .............................................................G..........................G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       P  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  T  S 
                    Query_8948   91   CCGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCAGTAGACACGTCT  180
V  96.8% (242/250)  IGHV4-31*03  139  .T..................................................................T.C...................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  H  Y  A  Y  S 
                    Query_8948   181  AAGAATCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGGTCCCCACTATGCCTATTCC  270
V  96.8% (242/250)  IGHV4-31*03  229  .....C....................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD2-2*01   25   -----------------------------------------------------------------------------.......------  31

                                      GT------------------>                                  
                                       S  G  G  Y  V  E  S  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_8948   271  AGCGGGGGATATGTTGAGTCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  325
J  92.9% (39/42)    IGHJ4*02     7    -------------....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_296940

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_8949   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_8949   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCGGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A..A................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  L  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_8949   181  CAGTTCTCCCTGAAGCTGAGCTCTCTGACCGCTGCGGACGCGGCCGTGTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  ........................G..............A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8949   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_322910

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            396     2e-112
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCG	GCAGTGGCTGGT	TCGGGGACC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCGGCAGTGGCTGGTTCGGGGACCTTGACTAC	ARDLGSGWFGDLDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  A  F  T  A  Y
                    Query_8950   1    GCAGCTGGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACGCCTTCACCGCCTA  90
V  93.5% (272/291)  IGHV1-2*04   6    ..................G.....G...................................................A.........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  Y  T  G  A  T  N  Y  A  Q
                    Query_8950   91   CTATATCCACTGGGTGCGACAGGCCCCCGGACAAGGGCTTGAGTGGATGGGTTGGATCAACCCTTACACTGGTGCCACAAACTATGCACA  180
V  93.5% (272/291)  IGHV1-2*04   96   ......G....................T.......................A............A...G.....G...............  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  Q  D  W  V  T  L  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  K  S  D  D  S  A
                    Query_8950   181  GAACTTTCAAGACTGGGTCACCTTGACCAGGGACACGTCAATCAGCACTGCCTACATGGAACTGAGCAGGCTGAAATCTGACGACTCGGC  270
V  93.5% (272/291)  IGHV1-2*04   186  ...G.....G.G..........A................C........A...........G.............G..........A....  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  D  L  G  S  G  W  F  G  D  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8950   271  CGTGTATTACTGTGCGAGAGATCTCGGCAGTGGCTGGTTCGGGGACCTTGACTACTGGGGCCAGGGAACACTAGTCACCGTCTCCTCAG  359
V  93.5% (272/291)  IGHV1-2*04   276  .....................--------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                       
D  100.0% (12/12)   IGHD6-19*01  8    --------------------------............---------------------------------------------------  19
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------------------......................C..G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_25527

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           374     8e-106
IGHD3-9*01                                                                                            27.6    8e-04 
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCGGTCTTA	TGATTGGTTATTATAAC	CTTGGCCAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCGGTCTTATGATTGGTTATTATAACCTTGGCCAG	ARLGLMIGYYNLGQ	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	61	9	0	87.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	264	25	0	91.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  G  R  R  P  G  E  T  L  T  I  S  C  V  A  S  G  Y  T  F  S  T  Y
                    Query_8951   1    GCAGCTGGTGCAGTCTGGAGTAGAGGGGAGAAGGCCGGGGGAGACTCTGACGATCTCCTGTGTGGCTTCTGGATACACGTTTTCCACCTA  90
V  91.3% (264/289)  IGHV5-51*03  6    ....................C.....T..A..A..........T......A..........AA..G...........GC...A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  G  Y  S  P
                    Query_8951   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGTAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCGGTTACAGCCC  180
V  91.3% (264/289)  IGHV5-51*03  96   ........G.....................G.............G..................................A.A........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  R  W  S  S  L  R  A  S  G  T  A
                    Query_8951   181  GCCCTTCCAAGGCCAGGTCACCATTTCAGCCGACAAGTCCATCAGAACCGCCTACCTGCGGTGGAGCAGCCTGAGGGCCTCGGGCACCGC  270
V  91.3% (264/289)  IGHV5-51*03  186  .T......................C....................C.............A..............A........A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                 
                                        M  Y  F  C  A  R  L  G  L  M  I  G  Y  Y  N  L  G  Q  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_8951   271  CATGTATTTCTGTGCGAGACTCGGTCTTATGATTGGTTATTATAACCTTGGCCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  358
V  91.3% (264/289)  IGHV5-51*03  276  ........A..........---------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                      
D  94.1% (16/17)    IGHD3-9*01   15   -----------------------------...C.............------------------------------------------  31
J  100.0% (33/33)   IGHJ4*02     15   -------------------------------------------------------.................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_145988

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           297     7e-83
IGHD1-26*01                                                                                           12.2    32   
IGHJ6*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGCTCCCGGAGACCA	GTATAATGG	C	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAGGCTCCCGGAGACCAGTATAATGGCATGGACGTC	VREAPGDQYNGMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  R  F  R  S  Y  G  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_8952   1    GGTCCCTGAGACTCTCCTGTGTAGGTTCTGGATTCAGGTTCAGAAGTTATGGCATGTACTGGGTCCGTCAGGCTCCAGGCAAGGGGCTGG  90
V  88.0% (220/250)  IGHV3-30*03  47   .....................C..CC..........CC.....T..C.........C..........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  L  Y  D  G  S  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8952   91   AGTGGGTGTCAGTCATATTATATGATGGAAGTAAAAAATATTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  88.0% (220/250)  IGHV3-30*03  137  ........G....T....C...............T.....C...........C................................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  D  M  N  T  L  G  P  E  D  T  A  T  Y  Y  C  V  R  E  A  P  G  D  Q  Y  
                    Query_8952   181  AGAATACACTATATCTAGACATGAACACCCTAGGACCTGAGGACACGGCTACATATTACTGTGTGAGAGAGGCTCCCGGAGACCAGTATA  270
V  88.0% (220/250)  IGHV3-30*03  227  ....C..G..G.....GC.A.......G...GA..G..............GTG..........C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD1-26*01  2    -------------------------------------------------------------------------------------.....  6

                                      ------------->                                 
                                      N  G  M  D  V  W  G  Q  G  T  A  V  I  V  S  S 
                    Query_8952   271  ATGGCATGGACGTCTGGGGCCAGGGGACCGCGGTCATCGTCTCGTCA  317
D  88.9% (8/9)      IGHD1-26*01  7    G...-------------------------------------------  10
J  90.5% (38/42)    IGHJ6*02     21   -----.................A......A......C......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_273339

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           366     2e-103
IGHD2-15*01                                                                                           14.1    10.0  
IGHJ6*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGGGCTGCATC	TTGTAGCGGT	TCCAATTGCTACGACTTAGG	CGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGCTGCATCTTGTAGCGGTTCCAATTGCTACGACTTAGGCGGAATGGACGTC	ARRAASCSGSNCYDLGGMDV	290	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	70	5	0	93.3
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	46	5	0	90.2
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	102	12	0	89.5
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	294	264	30	0	89.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  L  G  S  G  Y  S  F  V 
                    Query_8953   2    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCTGGGTTCTGGATACAGCTTTGTC  91
V  89.8% (264/294)  IGHV5-51*03  1    .....G........G....................A..............................AA...................AC.  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       K  Y  W  I  A  W  V  R  Q  T  P  G  K  G  L  E  W  M  G  T  I  Y  P  S  D  S  D  T  R  Y 
                    Query_8953   92   AAATATTGGATTGCTTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGGACCATCTATCCGTCTGACTCTGATACCCGATAC  181
V  89.8% (264/294)  IGHV5-51*03  91   .GC..C.....C.GC.............T.............................T.........TGG.............A.....  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  L  S  T  A  F  L  Q  W  S  S  L  G  V  S  D 
                    Query_8953   182  AGCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTCTCTCCACCGCCTTCCTGCAGTGGAGCAGCCTGGGGGTCTCGGAC  271
V  89.8% (264/294)  IGHV5-51*03  181  ..................................C.........CA..AG........A...................AA..C.......  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       S  A  I  Y  Y  C  A  R  R  A  A  S  C  S  G  S  N  C  Y  D  L  G  G  M  D  V  W  G  R  G 
                    Query_8953   272  AGCGCCATTTATTACTGTGCGAGACGGGCTGCATCTTGTAGCGGTTCCAATTGCTACGACTTAGGCGGAATGGACGTCTGGGGCCGAGGG  361
V  89.8% (264/294)  IGHV5-51*03  271  .C......G...............------------------------------------------------------------------  294
                                       T  A  M  Y  Y  C  A  R                                                                   
D  90.0% (9/10)     IGHD2-15*01  7    -----------------------------------......T...---------------------------------------------  16
J  93.5% (43/46)    IGHJ6*02     17   -----------------------------------------------------------------...T................A....  41

                                                           
                                       T  T  V  I  V  S  S 
                    Query_8953   362  ACCACGGTCATCGTCTCCTCA  382
J  93.5% (43/46)    IGHJ6*02     42   ..........C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_273338

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           336     1e-94
IGHD6-19*01                                                                                           21.8    0.039
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCAGG	GCAGTGGCTGG	CACG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTC	ARVPGQWLARGMDV	234	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	119	21	18	3	0	85.7
FR3-IMGT	120	233	114	112	2	0	98.2
CDR3-IMGT (germline)	234	240	7	7	0	0	100
Total	N/A	N/A	229	222	7	0	96.9


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  V  S  S  S  Y  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  M 
                    Query_8954   12   TGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATG  101
V  96.9% (222/229)  IGHV3-53*01  64   ...............................A........G................................................T  153
                                       C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I 

                                      ---CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-----------
                                       Y  S  G  G  T  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 
                    Query_8954   102  TATAGCGGTGGGACCACATACTACGCAGAGTCCGTGAAGGGCCGATTCACCATCTCAAGAGACAATTCCAAGAACACGCTGTATCTTCAA  191
V  96.9% (222/229)  IGHV3-53*01  154  ...........T.G...............C..........................C.................................  243
                                       Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 

                                      -----------------------------------------><----------------CDR3-IMGT--------------->      
                                       M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  G  Q  W  L  A  R  G  M  D  V  W  G 
                    Query_8954   192  ATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTCTGGGGC  281
V  96.9% (222/229)  IGHV3-53*01  244  .................................................-----------------------------------------  292
                                       M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                           
D  100.0% (11/11)   IGHD6-19*01  8    --------------------------------------------------------...........-----------------------  18
J  100.0% (46/46)   IGHJ6*02     17   -----------------------------------------------------------------------...................  35

                                                                 
                                       Q  G  T  T  V  T  V  S  S 
                    Query_8954   282  CAAGGGACCACGGTCACCGTCTCCTCA  308
J  100.0% (46/46)   IGHJ6*02     36   ...........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_273335

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           285     4e-79
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCATTCTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATTCTGCTTTGACTTC	ARVSTSAFCFDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	213	31	0	87.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_8955   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGACAACCCCCAGGAAAGGGACTGGAG  90
V  87.3% (213/244)  IGHV4-59*01  49   .................................T........A.....T.C.........A....G..G........G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  S  F  A  T  S  K  R 
                    Query_8955   91   TGGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGTCCTTTGCCACGTCCAAGAGG  180
V  87.3% (213/244)  IGHV4-59*01  139  .......GGT....C...........G.G..C...C................A..G............A..AG.A.A...........AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  F  C  F  D 
                    Query_8955   181  CAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATTCTGCTTTGAC  270
V  87.3% (213/244)  IGHV4-59*01  229  .............A....AGC..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-2*01   17   ---------------------------------------------------------------------......---------------  22
J  90.5% (38/42)    IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                
                                       F  W  G  R  G  T  L  V  V  V  S  S
                    Query_8955   271  TTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  305
J  90.5% (38/42)    IGHJ4*02     12   .A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_332495

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           363     2e-102
IGHD3-16*01                                                                                           41.1    8e-08 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CCAGGCCACACTGCA	TATGATTACGTTTCGGGGAGTTAT	TTCGTAAGGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCCAGGCCACACTGCATATGATTACGTTTCGGGGAGTTATTTCGTAAGGGGCTACTTAGACAAG	APGHTAYDYVSGSYFVRGYLDK	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	259	27	0	90.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  V  S  G  D  T  F  S  G  Y
                    Query_8956   1    GCAGCTGGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGTCTCTGGAGACACCTTCAGCGGCTA  90
V  90.6% (259/286)  IGHV1-69*01  6    ..................G.....G........................................CT.......G..........A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  G  I  I  P  I  F  G  T  A  D  Y  T  Q
                    Query_8956   91   TGCTATCAACTGGGTACGCCAGGCCCCTGGACAAGGACTTGAGTGGGTGGGGGGAATCATCCCTATTTTTGGTACTGCAGACTACACACA  180
V  90.6% (259/286)  IGHV1-69*01  96   ........G......G..A.................G.........A....A..G...........C........A...A.....G....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  Y  L  G  R  V  T  I  T  A  D  Q  S  T  S  T  S  Y  M  E  L  N  S  L  R  S  E  D  T  A
                    Query_8956   181  GAAGTACCTGGGCAGGGTCACTATTACCGCGGACCAATCCACGAGCACAAGCTACATGGAACTGAACAGCCTGAGGTCTGAGGACACGGC  270
V  90.6% (259/286)  IGHV1-69*01  186  .....T..A......A.....G............G..............GC.........G....G.........A..............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------------CDR3-IMGT--------------------------->           
                                        V  Y  Y  C  A  P  G  H  T  A  Y  D  Y  V  S  G  S  Y  F  V  R  G  Y  L  D  K  W  G  Q  G
                    Query_8956   271  CGTGTATTACTGTGCGCCAGGCCACACTGCATATGATTACGTTTCGGGGAGTTATTTCGTAAGGGGCTACTTAGACAAGTGGGGCCAGGG  360
V  90.6% (259/286)  IGHV1-69*01  276  ................--------------------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                           
D  95.8% (23/24)    IGHD3-16*01  5    -------------------------------.............G..........-----------------------------------  28
J  93.6% (44/47)    IGHJ4*02     2    ------------------------------------------------------------------......T...T.C...........  25

                                                             
                                        T  L  V  T  V  S  S  
                    Query_8956   361  AACCCTGGTCACCGTCTCCTCAG  383
J  93.6% (44/47)    IGHJ4*02     26   .......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_273337

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-13*01                                                                                           302     3e-84
IGHD3-3*01                                                                                            14.1    8.9  
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-13*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	CAGCCGAAGTCAGGGGGCCGCCGGCGAATGGGATTT	TATTACCATT	C	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGACAGCCGAAGTCAGGGGGCCGCCGGCGAATGGGATTTTATTACCATTCCGGTATGGACGTC	ARQPKSGGRRRMGFYYHSGMDV	240	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	245	219	26	0	89.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  F  G  F  P  F  S  G  Y  D  M  H  W  V  R  Q  A  A  G  S  G  L  
                    Query_8957   1    GGTCCCTGAGACTCTCCTGTACAGCCTTTGGATTCCCCTTCAGTGGCTACGACATGCACTGGGTCCGCCAAGCTGCAGGAAGTGGGCTGG  90
V  89.4% (219/245)  IGHV3-13*01  47   ....................G......C.......A........A.............................A......AA..T....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  D  M  H  W  V  R  Q  A  T  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  G  I  D  T  T  G  E  T  F  Y  L  G  S  V  K  G  R  F  T  I  S  R  D  D  A  K  
                    Query_8957   91   AGTGGGTCTCAGGGATTGATACTACTGGTGAGACGTTCTATTTAGGCTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACGATGCCAAGA  180
V  89.4% (219/245)  IGHV3-13*01  137  ............CT....G....G.......C..A.A....CC..................A.................AA.........  226
                                      E  W  V  S  A  I  G  T  A  G  D  T  Y  Y  P  G  S  V  K  G  R  F  T  I  S  R  E  N  A  K  

                                      3-IMGT----------------------------------------------------><----------------------------CD
                                      N  S  M  Y  L  Q  M  N  S  L  T  A  G  D  T  A  V  Y  F  C  A  R  Q  P  K  S  G  G  R  R  
                    Query_8957   181  ACTCCATGTATCTGCAAATGAACTCCCTGACAGCCGGGGACACGGCTGTGTATTTCTGTGCAAGACAGCCGAAGTCAGGGGGCCGCCGGC  270
V  89.4% (219/245)  IGHV3-13*01  227  .....T.......T.........AG.....G.......................A..........-------------------------  291
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R                          

                                      R3-IMGT--------------------------->                                 
                                      R  M  G  F  Y  Y  H  S  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8957   271  GAATGGGATTTTATTACCATTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  338
D  90.0% (9/10)     IGHD3-3*01   2    -----------......G...-----------------------------------------------  11
J  100.0% (46/46)   IGHJ6*02     17   ----------------------..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_273336

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           382     3e-108
IGHD3-16*02                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	GATTACGTTTGGGGGAATTATCGT	CACCTTCCCGGC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGATTACGTTTGGGGGAATTATCGTCACCTTCCCGGCGACTTC	AREDYVWGNYRHLPGDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8958   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-33*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  V  S  N  K  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8958   91   AGTGGGTGGCAGTTATATGGTATGATGTAAGTAATAAATACTATACAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  98.8% (247/250)  IGHV3-33*01  137  ...........................G................G.............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  D  Y  V  W  G  N  
                    Query_8958   181  AGAACACGCTGTACCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGGATTACGTTTGGGGGAATT  270
V  98.8% (247/250)  IGHV3-33*01  227  .............T........................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.8% (23/24)    IGHD3-16*02  8    -----------------------------------------------------------------------................G..  26

                                      GT-------------------->                                  
                                      Y  R  H  L  P  G  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8958   271  ATCGTCACCTTCCCGGCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.8% (23/24)    IGHD3-16*02  27   .....----------------------------------------------------  31
J  97.5% (39/40)    IGHJ4*02     9    -----------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_332490

Length=306
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           288     4e-80
IGHD2-2*02                                                                                            12.2    28   
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCA	CTGGTATAC	TTACGTCAGCGGGGGATATG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTGGTATACTTACGTCAGCGGGGGATATGTTGACTAC	ARGHWYTYVSGGYVDY	202	249	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
CDR1-IMGT	15	15	1	1	0	0	100
FR2-IMGT	16	66	51	50	1	0	98
CDR2-IMGT	67	87	21	20	1	0	95.2
FR3-IMGT	88	201	114	111	3	0	97.4
CDR3-IMGT (germline)	202	208	7	7	0	0	100
Total	N/A	N/A	194	189	5	0	97.4


Alignments

                                       <--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><----------------
                                        W  S  W  I  R  Q  H  P  G  K  G  L  E  W  I  G  C  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L
                    Query_8959   15   CTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTGCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCT  104
V  97.4% (189/194)  IGHV4-31*02  105  ..................................................A.................G.....................  194
                                        W  S  W  I  R  Q  H  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L

                                      ------------------------------------FR3-IMGT----------------------------------------------
                                        K  S  R  A  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y
                    Query_8959   105  CAAGAGTCGAGCTACCATATCAGTAGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTA  194
V  97.4% (189/194)  IGHV4-31*02  195  ...........T................................................C..........................G..  284
                                        K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y

                                      ------><-------------------CDR3-IMGT------------------>                                  
                                        Y  C  A  R  G  H  W  Y  T  Y  V  S  G  G  Y  V  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_8959   195  TTACTGTGCGAGAGGTCACTGGTATACTTACGTCAGCGGGGGATATGTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  283
V  97.4% (189/194)  IGHV4-31*02  285  ..............---------------------------------------------------------------------------  298
                                        Y  C  A  R                                                                             
D  88.9% (8/9)      IGHD2-2*02   22   ------------------...C.....--------------------------------------------------------------  30
J  97.6% (41/42)    IGHJ4*02     7    -----------------------------------------------.............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 29459889


Query= Query_332491

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           325     3e-91
IGHD2-15*01                                                                                           25.7    0.003
IGHJ6*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACTGGC	ATATTGTAGTGGT	ATGAGTTGCACCTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACTGGCATATTGTAGTGGTATGAGTTGCACCTCTTACTACTACGCTATGGACGTC	ARVLAYCSGMSCTSYYYAMDV	237	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	20	23	4	4	0	0	100
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	224	216	8	0	96.4


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_8960   20   GTCTGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCTGTTATATGGTATGA  109
V  96.4% (216/224)  IGHV3-33*01  72   ....................G......................................................A..............  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  N  N  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_8960   110  TGGAAATAATAAATACTATGGAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAACTCCAAGAACACGCTGTATTTGCAAATGAA  199
V  96.4% (216/224)  IGHV3-33*01  162  .....G..............C..................A....................T..................C..........  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------------------CDR3-IMGT-----------------
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  L  A  Y  C  S  G  M  S  C  T  S  Y  Y  Y  A
                    Query_8960   200  CAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGTACTGGCATATTGTAGTGGTATGAGTTGCACCTCTTACTACTACGC  289
V  96.4% (216/224)  IGHV3-33*01  252  ...........................G................----------------------------------------------  295
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (13/13)   IGHD2-15*01  4    ---------------------------------------------------.............--------------------------  16
J  98.1% (53/54)    IGHJ6*02     9    -------------------------------------------------------------------------------..........G  19

                                      --------->                                 
                                        M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8960   290  TATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  98.1% (53/54)    IGHJ6*02     20   ...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_332492

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           353     9e-100
IGHD5-18*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGCCATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGCCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	114	0	0	100
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	234	8	0	96.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  P  G  G  S  I  R  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E  
                    Query_8961   4    CCCTGAGACTCTCCTGCACTGTCCCTGGTGGCTCCATCAGGAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAAAGACTGGAGT  93
V  96.7% (234/242)  IGHV4-59*01  50   .....TCC...A...........T................T......................................GG.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_8961   94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  96.7% (234/242)  IGHV4-59*01  140  ..........................................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D  
                    Query_8961   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGCCATGGTTACGGAGGAGTTGACT  273
V  96.7% (234/242)  IGHV4-59*01  230  ..............................................................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  93.3% (14/15)    IGHD5-18*01  6    --------------------------------------------------------------......T........-------------  20
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------------------------------------------......  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8961   274  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (42/42)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_332493

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           346     2e-97
IGHD6-19*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCG	GTGGCTGGTAC	GG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCGGTGGCTGGTACGGCTAC	ARGGGWYGY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_8962   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-48*03  47   ............................................AGT...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  G  G  A  N  I  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  G  
                    Query_8962   91   AGTGGGTTTCATACATTAGTAGTGGTGGTGCTAACATATACTACGCAGATTCTGTGAGGGGCCGTTTCACCATCTCCAGAGACAACGGCA  180
V  94.4% (235/249)  IGHV3-48*03  137  .......................A.....AG..C...............C.......A......A......................C..  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  G  W  Y  G  Y  
                    Query_8962   181  GGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTATTGTGCGCGAGGCGGTGGCTGGTACGGCTACT  270
V  94.4% (235/249)  IGHV3-48*03  227  A.........................................................C......A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-19*01  11   ------------------------------------------------------------------------...........-------  21
J  100.0% (38/38)   IGHJ4*02     11   -------------------------------------------------------------------------------------.....  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8962   271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (38/38)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_241909

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           335     4e-94
IGHD2-2*01                                                                                            29.5    2e-04
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCT	TTGTACTAGTACCAGTTGCTA	CTCCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCTTTGTACTAGTACCAGTTGCTACTCCTTCTACTCGTACGGTCTGGACGTC	ARELCTSTSCYSFYSYGLDV	239	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	21	3	0	87.5
FR3-IMGT	125	238	114	112	2	0	98.2
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	232	223	9	0	96.1


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  I  Y  S  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  
                    Query_8963   15   GTGCAGCCTCTGGATTCACCTTCAGTATATATAGTATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTA  104
V  96.1% (223/232)  IGHV3-21*01  65   ...........................GC.....C....A..................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  S  S  T  Y  T  Y  Y  A  D  S  M  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_8963   105  GTAGTAGTAGTACTTATACATACTACGCAGACTCAATGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGC  194
V  96.1% (223/232)  IGHV3-21*01  155  ............G...C.T................G.........................A............................  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-------------------------CDR3-IMGT-----------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  L  C  T  S  T  S  C  Y  S  F  Y  S  
                    Query_8963   195  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGCTTTGTACTAGTACCAGTTGCTACTCCTTCTACTCGT  284
V  96.1% (223/232)  IGHV3-21*01  245  ....................................................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  90.5% (19/21)    IGHD2-2*01   7    -------------------------------------------------------.....G.........C.....--------------  27
J  94.5% (52/55)    IGHJ6*02     8    ----------------------------------------------------------------------------------.....AC.  15

                                      ------------->                                 
                                      Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8963   285  ACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  331
J  94.5% (52/55)    IGHJ6*02     16   .....A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_241908

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           262     4e-72
IGHD1-26*01                                                                                           10.3    114  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TATTG	CACA	GGAGC	ATCAGGTGAGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGGTGAGGGGTGGTTCGACCCC	TGASGEGWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	17	7	0	70.8
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	18	6	0	75
FR3-IMGT	124	236	113	101	12	0	89.4
Total	N/A	N/A	223	195	28	0	87.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  E  V  T  F  R  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_8964   14   GTGCAGCGTCTGAAGTTACCTTCAGAAATTATGGGATGCACTGGGTCCGCCAGGCCCCAGGCAAGGGACTGGAATGGGTGGCAGTTATTT  103
V  87.4% (195/223)  IGHV3-33*03  65   ............G.T.C........T.GC.....C....................T...........G.....G..............A.  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      W  Y  D  S  I  K  T  F  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  D  S  R  N  T  L  F  L  
                    Query_8964   104  GGTATGATTCAATTAAGACATTCTATGCGGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACGACTCCAGGAACACCCTGTTTCTGC  193
V  87.4% (195/223)  IGHV3-33*03  155  ........GG..G...T.A..A......A..........A.........................A......A......G....A.....  244
                                      W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------CDR3-IMGT----------->             
                                      Q  M  N  S  L  R  A  D  D  T  A  L  Y  Y  C  T  G  A  S  G  E  G  W  F  D  P  W  G  Q  G  
                    Query_8964   194  AGATGAACAGCCTGAGAGCCGACGACACGGCTCTTTATTATTGCACAGGAGCATCAGGTGAGGGGTGGTTCGACCCCTGGGGCCAGGGAA  283
V  87.4% (195/223)  IGHV3-33*03  245  .A....................G.........G.G.....C..-----------------------------------------------  287
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                                  
D  100.0% (5/5)     IGHD1-26*01  10   -----------------------------------------------.....--------------------------------------  14
J  97.8% (45/46)    IGHJ5*02     6    -----------------------------------------------------------------.........................  30

                                                           
                                      T  Q  V  T  V  S  S  
                    Query_8964   284  CCCAGGTCACCGTCTCCTCAG  304
J  97.8% (45/46)    IGHJ5*02     31   ...T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_241907

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            16.1    2.3  
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGGGAGGCGG	TTACGATT	CTATCCTCGGT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGGAGGCGGTTACGATTCTATCCTCGGTCTACGACTACGCTATGGACGTC	ASGEAVTILSSVYDYAMDV	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	232	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  F  Y  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_8965   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  95.9% (232/242)  IGHV4-59*01  49   ...........................................G..A................................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  Y  Y  S  G  R  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_8965   91   TGGATTGGGTCTATTTATTACAGTGGGAGGACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCGTATCAGTTGACACGTCCAAGAAC  180
V  95.9% (232/242)  IGHV4-59*01  139  ..........A...C..............C....................................A.......A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  G  E  A  V  T  I  L  S  S 
                    Query_8965   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGCGGGGAGGCGGTTACGATTCTATCCTCG  270
V  95.9% (232/242)  IGHV4-59*01  229  ...................G.................................C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (8/8)     IGHD3-3*01   4    -------------------------------------------------------------------------........---------  11

                                      ----------------------->                                 
                                       V  Y  D  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8965   271  GTCTACGACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  327
J  96.4% (53/55)    IGHJ6*02     8    --....T......G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_241906

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            357     1e-100
IGHD3-3*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CGCATTTCGATGAA	GATTTTTGGAGTGGTCATTAT	TC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGCATTTCGATGAAGATTTTTGGAGTGGTCATTATTCCTACTACGGTATGGACGTC	ATHFDEDFWSGHYSYYGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	237	9	0	96.3


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8966  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.3% (237/246)  IGHV3-7*03  47   .............................................G............C...............................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  K  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8966  91   AGTGGGTGGCCAACATAAAAAAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.3% (237/246)  IGHV3-7*03  137  ...................GC.................T...................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------------CD
                                     M  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  H  F  D  E  D  F  W  
                    Query_8966  181  TGAACTCACTATATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCCGTGTATTACTGCGCGACGCATTTCGATGAAGATTTTTGGA  270
V  96.3% (237/246)  IGHV3-7*03  227  A.........G.............................G....................T....------------------------  292
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  95.2% (20/21)    IGHD3-3*01  8    --------------------------------------------------------------------------------..........  17

                                     R3-IMGT------------------------>                                 
                                     S  G  H  Y  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8966  271  GTGGTCATTATTCCTACTACGGTATGGACGTCTGGGGCCAAGGGACAACGGTCACCGTCTCCTCA  335
D  95.2% (20/21)    IGHD3-3*01  18   .....T.....------------------------------------------------------  28
J  98.1% (51/52)    IGHJ6*02    11   -------------.................................C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_241905

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           293     2e-81
IGHD6-19*01                                                                                           21.8    0.042
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGAGCCTCTACGCTAAT	AGTGGCTGGTA	TCGGGGTCCCAG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGAGCCTCTACGCTAATAGTGGCTGGTATCGGGGTCCCAGCTGGTTCGACCCC	AKSLYANSGWYRGPSWFDP	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	214	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  P  N  Y  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_8967   1    ACCCTGTCCCTCACCTGCAGTGTCTCCGGTGGCTCCATAAGTCCCAACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  88.8% (214/241)  IGHV4-59*08  49   ...................C......T...........C...AGTT.................................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  F  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  R  D 
                    Query_8967   91   TGGATTGGATTCATTCATTACAGTGGAGCCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACTATGTCAGTGGACACGTCCAGGGAC  180
V  88.8% (214/241)  IGHV4-59*08  139  ........G.AT..CT..........GAG......C.............................C..A.....A..........A.A..  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  S  L  Y  A  N  S  G  W  Y 
                    Query_8967   181  CAGTTCTCCCTGAGGCTGAGCTCGGTGACCGCCGCAGACACGGCCGTTTACTATTGTGCGAAGAGCCTCTACGCTAATAGTGGCTGGTAT  270
V  88.8% (214/241)  IGHV4-59*08  229  .............A.........T.......................G..T..C.......-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (11/11)   IGHD6-19*01  10   ------------------------------------------------------------------------------...........-  20

                                      ----------------------->                                  
                                       R  G  P  S  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8967   271  CGGGGTCCCAGCTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  328
J  95.7% (45/47)    IGHJ5*02     5    -----------........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_241904

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           367     5e-104
IGHD3-10*01                                                                                           10.3    116   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACGAGCGGTC	TCGGG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACGAGCGGTCTCGGGATTGACTAC	ARDTSGLGIDY	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	243	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_8968   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTTCTTACTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (243/251)  IGHV4-31*03  49   ................................................GG...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  R  S  G  S  T  Y  Y  N  P  S  L  K  S  R  I  T  I  S  I  D  T  S 
                    Query_8968   91   CTGGAGTGGATTGGGTACATCTATCGCAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAATTACCATATCAATAGACACGTCT  180
V  96.8% (243/251)  IGHV4-31*03  139  ........................TA........................................G...........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  S  G  L  G  I 
                    Query_8968   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGATACGAGCGGTCTCGGGATT  270
V  96.8% (243/251)  IGHV4-31*03  229  .....................................................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  14   ----------------------------------------------------------------------------------.....---  18
J  100.0% (42/42)   IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8968   271  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (42/42)   IGHJ4*02     9    ........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_241902

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_8969   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG..G.T..................................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_8969   91   TGGATTGGATATATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  93.4% (228/244)  IGHV4-59*01  139  ........G...................G.....A............................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W 
                    Query_8969   181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------------------------------------------....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_8969   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (35/35)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_241901

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            394     7e-112
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              56.4    4e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGG	GAC	TGGTACGGGGA	CTTTCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGGGACTGGTACGGGGACTTTCCCCTTTGATTAC	AGGTGTGTFPFDY	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	100	14	0	87.7
CDR3-IMGT (germline)	291	298	8	7	1	0	87.5
Total	N/A	N/A	296	274	22	0	92.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  G 
                    Query_8970   3    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCGGC  92
V  92.6% (274/296)  IGHV1-8*02   1    .....G.................G...............................................................AC.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  D  Y 
                    Query_8970   93   AGCTATGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATGAATCCTAACAGTGGGAACACAGACTAT  182
V  92.6% (274/296)  IGHV1-8*02   91   ..............................A..................................C...........T.......G....  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  Y  M  E  L  K  S  R  G  F  A  D 
                    Query_8970   183  GCACAGAAGTTCCGGGGCAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCTACATGGAGCTGAAAAGCCGGGGATTTGCCGAC  272
V  92.6% (274/296)  IGHV1-8*02   181  .............A.......................A...C..C.T.......................GC....T.A...C..AG...  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  Y  C  A  G  G  T  G  T  G  T  F  P  F  D  Y  W  G  L  G  T  L  V  A  T  S  S 
                    Query_8970   273  ACGGCCGTTTATTACTGTGCGGGAGGGACTGGTACGGGGACTTTCCCCTTTGATTACTGGGGCCTGGGAACCCTGGTCGCCACCTCCTCA  362
V  92.6% (274/296)  IGHV1-8*02   271  ........G............A....----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R  G                                                                
D  90.9% (10/11)    IGHD3-10*01  10   -----------------------------....T......--------------------------------------------------  20
J  88.6% (39/44)    IGHJ4*02     5    -----------------------------------------------......C..........A.............A..GT.......  47

                                       
                                       
                    Query_8970   363  G  363
J  88.6% (39/44)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_219613

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD2-8*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TAATGGTGT	GGCAGTGGCTAGAAGATTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAATGGTGTGGCAGTGGCTAGAAGATTTTTTGACTCC	ARDNGVAVARRFFDS	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  I  S  G  G  S  F  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  E  G  L  E 
                    Query_8971   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGGCTCCTTCAGTTCTTATTACTGGAGCTGGATTCGGCAGTCCCCAGGGGAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   .....................G..............A.....AG...C..............C......C........A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8971   91   TGGATTGGCTATGTCTACTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G...A....T..C.....................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  N  G  V  A  V  A  R  R 
                    Query_8971   181  CAGTTCTCCCTGAGGCTGACGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATAATGGTGTGGCAGTGGCTAGAAGA  270
V  93.5% (229/245)  IGHV4-59*01  229  .............A.....GC..........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD2-8*01   13   -----------------------------------------------------------------.........----------------  21

                                      ----------->                                  
                                       F  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_8971   271  TTTTTTGACTCCTGGGGCCAGGGAATCCTGGTCACCGTTTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.......A..............C............C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_36240

Length=411
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            442     2e-126
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	287	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_8972   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  98.6% (287/291)  IGHV1-2*04   6    ..................G.............AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_8972   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.6% (287/291)  IGHV1-2*04   96   ..........................................................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_8972   181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  98.6% (287/291)  IGHV1-2*04   186  ..........................................................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W  G  Q
                    Query_8972   271  CGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGGGGCCA  360
V  98.6% (287/291)  IGHV1-2*04   276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  96.5% (55/57)    IGHJ6*02     6    ----------------------------------------------------------....A...........................  37

                                                               
                                        G  A  T  V  T  V  S  S 
                    Query_8972   361  AGGGGCCACGGTCACCGTCTCCTCA  385
J  96.5% (55/57)    IGHJ6*02     38   ....A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40288536


Query= Query_56487

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           349     3e-98
IGHD3-16*01                                                                                           14.1    8.9  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GAGGGCTCGCGGCGTCCCTTTTTATTTTAA	TTTGGGG	TCTTCTGGAGGA	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAGGGCTCGCGGCGTCCCTTTTTATTTTAATTTGGGGTCTTCTGGAGGATGGTTCGACCCC	ARGRARGVPFYFNLGSSGGWFDP	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8973   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGCTCCTTCAGTGGTTACTACTGGAACTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.5% (234/245)  IGHV4-34*01  49   ................................G......................G..................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  T  T  N  S  N  P  S  L  T  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8973   91   TGGATTGGCGAAATCAATCATAGTGGAACCACCAACTCCAACCCGTCGCTCACGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-34*01  139  ........G...................G........A.........C....A.....................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  V  S  L  N  L  R  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  G  R  A  R  G  V  P  F  Y 
                    Query_8973   181  CAGGTCTCCCTGAATCTGCGCTCTGTGACCGCCGCGGACACGGCTATGTATTACTGTGCGAGAGGGAGGGCTCGCGGCGTCCCTTTTTAT  270
V  95.5% (234/245)  IGHV4-34*01  229  ...T..........G...A..........................G...................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      3-IMGT----------------------------->                                  
                                       F  N  L  G  S  S  G  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8973   271  TTTAATTTGGGGTCTTCTGGAGGATGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  100.0% (7/7)     IGHD3-16*01  15   -----.......----------------------------------------------------------  21
J  100.0% (46/46)   IGHJ5*02     6    ------------------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_135019

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD2-15*01                                                                                           10.3    132   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CGAGAAG	GGTGG	CGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGACACGAGAAGGGTGGCGGGGCGAACGACTAC	VRHEKGGGANDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	6	2	0	75
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P  N  Y
                    Query_8974   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCCAATTA  90
V  93.8% (273/291)  IGHV5-51*01  6    ....................................C........................................GC...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  A  D  S  D  T  R  Y  S  L
                    Query_8974   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAACATCTATCCTGCTGACTCTGACACCAGATACAGTCT  180
V  93.8% (273/291)  IGHV5-51*01  96   .....................................................T...........G.........T...........C.C  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8974   181  GACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACACCGC  270
V  93.8% (273/291)  IGHV5-51*01  186  .T.....C.............................................................C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_8974   271  CGTGTATTATTGTGTCAGACACGAGAAGGGTGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  351
V  93.8% (273/291)  IGHV5-51*01  276  .A.......C....CG.....------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                               
D  100.0% (5/5)     IGHD2-15*01  14   ----------------------------.....------------------------------------------------  18
J  97.4% (37/38)    IGHJ4*02     9    -------------------------------------------....................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_37805

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           280     1e-77
IGHD6-19*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTGGTCGTC	AGCAGTGGCTGG	CCCTGGACGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGGTCGTCAGCAGTGGCTGGCCCTGGACGGC	ATGRQQWLALDG	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	13	8	0	61.9
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	210	31	0	87.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  F  G  E  S  F  T  S  H  F  W  I  W  V  R  Q  T  P  G  K  G  L  E 
                    Query_8975   1    ACCCTGTCCCTCACCTGCGCTGTCTTTGGTGAGTCCTTCACTAGTCACTTCTGGATCTGGGTCCGCCAGACCCCCGGGAAGGGGCTGGAG  90
V  87.1% (210/241)  IGHV4-34*01  49   .........................A.....G........G.G..T...A.....G....A........C....A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  S  N  Q  R  Q  R  S  K  Y  N  P  S  L  K  S  R  V  T  I  L  G  D  T  S  K  N 
                    Query_8975   91   TGGATTGGGGAAAGTAATCAGCGTCAAAGAAGCAAATACAATCCGTCCCTAAAGAGTCGAGTCACCATCTTAGGAGACACGTCCAAGAAT  180
V  87.1% (210/241)  IGHV4-34*01  139  .............TC.....TA..GG...C.C...C.....C........C.................A.C..T...............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  R  Q  Q  W  L  A  L  D 
                    Query_8975   181  CAGTTCTCTCTGAGGCTCAATTCTGTGACCGCCGCGGACACGGCTGTGTATTATTGTGCGACTGGTCGTCAGCAGTGGCTGGCCCTGGAC  270
V  87.1% (210/241)  IGHV4-34*01  229  ........C....A...G.GC................................C.......-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (12/12)   IGHD6-19*01  7    ----------------------------------------------------------------------............--------  18

                                      -->                                  
                                       G  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8975   271  GGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (35/35)   IGHJ4*02     14   --...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_215229

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           263     2e-72
IGHD3-3*01                                                                                            16.1    2.3  
IGHJ2*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGCATCGCGACA	TTTGGCGTGGT	CAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGCATCGCGACATTTGGCGTGGTCACCTACTGGTACTTCGATCTC	AREGIATFGVVTYWYFDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	93	21	0	81.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	209	41	0	83.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  Q  F  T  F  S  K  Y  R  M  N  W  A  R  Q  A  P  G  K  G  L  
                    Query_8976   1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTCAATTCACATTTAGTAAATATAGAATGAACTGGGCCCGCCAGGCTCCTGGGAAGGGGCTGG  90
V  83.6% (209/250)  IGHV3-21*01  47   .....................C..C....GG......C..C....GC.....C..........T............A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  L  S  S  S  G  A  H  I  F  Y  S  D  S  M  R  G  R  V  T  I  S  R  D  N  A  
                    Query_8976   91   AGTGGGTCTCCTCTCTTAGTAGTAGTGGAGCTCACATTTTCTACTCAGACTCAATGAGGGGCCGAGTCACAATCTCCAGAGACAACGCCA  180
V  83.6% (209/250)  IGHV3-21*01  137  ..........A..CA...........A.TAG.T....A.A....G........G...A.......T....C...................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  N  I  L  F  L  Q  M  D  N  L  R  V  E  D  T  A  I  Y  Y  C  A  R  E  G  I  A  T  F  G  
                    Query_8976   181  GGAATATTTTGTTTTTGCAAATGGACAACCTGAGAGTCGAAGACACGGCTATTTACTACTGTGCGAGAGAGGGCATCGCGACATTTGGCG  270
V  83.6% (209/250)  IGHV3-21*01  227  A...CTCAC...A.C........A...G........C...G.........G.G..T..............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD3-3*01   12   -----------------------------------------------------------------------------------.....A.  18

                                      IMGT--------------------->                                  
                                      V  V  T  Y  W  Y  F  D  L  W  G  R  G  T  V  V  S  V  S  S  
                    Query_8976   271  TGGTCACCTACTGGTACTTCGATCTCTGGGGCCGTGGCACCGTGGTCAGTGTCTCCTCAG  330
D  90.9% (10/11)    IGHD3-3*01   19   ....--------------------------------------------------------  22
J  96.2% (51/53)    IGHJ2*01     1    -------..................................C......C...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_215228

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*04                                                                                           392     2e-111
IGHD6-25*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*04	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAA	AGCAGCG	CTGGCAGGACCAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTC	ARQSSAGRTKYGMDV	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	69	5	0	93.2
CDR1-IMGT	76	99	24	17	7	0	70.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	272	21	0	92.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  R  S  S  G  Y  D  F  L  
                    Query_8977   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGCTAAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGAGTTCTGGGTACGACTTTCTCG  91
V  92.8% (272/293)  IGHV5-51*04  2    .............................G.G..A...............................A.G.......A...AG....AC.A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_8977   92   ACTACTGGATCGTCTGGGTGCGCCAAATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACA  181
V  92.8% (272/293)  IGHV5-51*04  92   G...........G............G..........................................................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  P  I  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  
                    Query_8977   182  GTCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGCCCATCAGTACCGCCTACCTGCAGTGGCGCAGTCTGAAGGCCTCGGACA  271
V  92.8% (272/293)  IGHV5-51*04  182  .C...............................C...............C..................A....C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  P  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  P  V  
                    Query_8977   272  CCGCCAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCCCCGTCT  361
V  92.8% (272/293)  IGHV5-51*04  272  ......T................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD6-25*01  7    --------------------------.......---------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -----------------------------------------------....................................A......  57

                                           
                                      S  S 
                    Query_8977   362  CCTCA  366
J  97.9% (47/48)    IGHJ6*02     58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_302399

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTATCGTTCGGGGACTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATCGTTCGGGGACTTATTTTGACTAC	ARGLYYYRSGTYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_8978   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ...................................................T.........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  T  R  I  T  I  S  V  D  T  S 
                    Query_8978   91   CTGGAGTGGATTGGGCACATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGACTCGAATTACCATATCAGTAGACACCTCC  180
V  96.0% (240/250)  IGHV4-31*03  139  ...............T..........C..................................G....G...................G..T  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  R  S 
                    Query_8978   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCTATTACTATCGTTCG  270
V  96.0% (240/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (22/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------.........G.....  16

                                      ----------------->                                  
                                       G  T  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8978   271  GGGACTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  91.7% (22/24)    IGHD3-10*01  17   ....G....-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    ---------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_215223

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           341     5e-96
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCACCGATCC	TATAACGATGATAGTAGTGGTTA	CC	ACTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCACCGATCCTATAACGATGATAGTAGTGGTTACCACTTGGACTAT	ARVHRSYNDDSSGYHLDY	239	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	22	2	0	91.7
FR3-IMGT	125	238	114	112	2	0	98.2
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	232	225	7	0	97


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  R  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 
                    Query_8979   14   TGTGCAGCCTCTGGATTCACCTTCAGAAGTTATGAGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGTTGGAGTGGGTTTCATACATT  103
V  97.0% (225/232)  IGHV3-48*03  64   ..........................T........A.................................C....................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  S  G  S  G  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_8979   104  AGTAGTAGTGGTAGTGGCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTG  193
V  97.0% (225/232)  IGHV3-48*03  154  ...............AC.........................................................................  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------------------CDR3-IMGT-------------
                                       Q  M  N  S  L  R  A  D  D  T  A  V  Y  F  C  A  R  V  H  R  S  Y  N  D  D  S  S  G  Y  H 
                    Query_8979   194  CAAATGAACAGCCTGAGAGCCGACGACACGGCTGTTTATTTCTGTGCGAGAGTCCACCGATCCTATAACGATGATAGTAGTGGTTACCAC  283
V  97.0% (225/232)  IGHV3-48*03  244  .......................G................A...........--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  91.3% (21/23)    IGHD3-22*01  2    ---------------------------------------------------------------...T..T................----  24
J  93.3% (42/45)    IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                                  
                                       L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8979   284  TTGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  326
J  93.3% (42/45)    IGHJ4*02     6    ..T.....C.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_215222

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           263     2e-72
IGHD2-8*02                                                                                            16.1    2.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGATGCGGCGGAGTGAATTCGGC	ACTGGTGG	GG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATGCGGCGGAGTGAATTCGGCACTGGTGGGGACTTCTTTGACCAC	ARMRRSEFGTGGDFFDH	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	20	10	0	66.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	94	20	0	82.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	207	39	0	84.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  R  S  V  S  F  L  W  S  W  V  R  Q  D  P  G  K  G 
                    Query_8980   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTGAGGAGTGTGTCTTTCCTCTGGAGCTGGGTCCGCCAGGACCCAGGGAAGGGC  90
V  84.1% (207/246)  IGHV4-31*03  49   ....................................A.C..C....GTGG..A.TA..........A........C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  R  Y  Y  S  G  S  S  R  Y  N  P  S  L  G  S  R  V  S  M  S  L  D  T  S 
                    Query_8980   91   CTGGAGTGGATTGGTTACAGGTATTACAGTGGAAGTAGTCGGTATAATCCGTCCCTCGGGAGTCGAGTTTCCATGTCACTAGACACGTCT  180
V  84.1% (207/246)  IGHV4-31*03  139  ..............G....TC...........G..C.CCTAC..C..C.........AA..........A....A...G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       R  N  Q  F  S  L  K  L  T  S  V  T  T  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  F  G 
                    Query_8980   181  AGGAACCAATTTTCCCTGAAGTTGACCTCAGTGACGACCGCGGACACGGCCATCTATTACTGTGCGCGGATGCGGCGGAGTGAATTCGGC  270
V  84.1% (207/246)  IGHV4-31*03  229  .A......G..C.........C...G...T.....TG..............G.G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      MGT-------------------->                                  
                                       T  G  G  D  F  F  D  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_8980   271  ACTGGTGGGGACTTCTTTGACCACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  328
D  100.0% (8/8)     IGHD2-8*02   11   ........--------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*02     1    ----------...A.......T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_302396

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           355     3e-100
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_8981   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGCC  93
V  96.0% (237/247)  IGHV4-31*03  50   .....TCC...A.....................C......C.............................C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_8981   94   TGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  96.0% (237/247)  IGHV4-31*03  140  ....G.........T.C.........................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  
                    Query_8981   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCG  273
V  96.0% (237/247)  IGHV4-31*03  230  ...................................................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  100.0% (51/51)   IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8981   274  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (51/51)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_215220

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD6-6*01                                                                                            14.1    9.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTC	ATTREQLVPIFDF	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	72	3	0	96
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	106	8	0	93
CDR3-IMGT (germline)	292	295	4	4	0	0	100
Total	N/A	N/A	292	272	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  L  S 
                    Query_8982   4    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATTTCCTGTAAGGGTTCTGGATACAGATTAAGC  93
V  93.2% (272/292)  IGHV5-51*01  1    .....G........G............................................C.......................C..T.C.  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  E  T  K  Y 
                    Query_8982   94   AGTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCGTCTATCCTGGTGACTCTGAGACCAAATAC  183
V  93.2% (272/292)  IGHV5-51*01  91   ..C..C.......G..........................................G...A...................T....G....  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  S  F  E  G  Q  V  T  I  S  A  D  K  A  S  G  T  A  F  L  Q  W  D  S  L  K  A  S  D 
                    Query_8982   184  AGCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGGCCAGCGGCACCGCCTTCCTGCAGTGGGACAGCCTGAAGGCCTCGGAC  273
V  93.2% (272/292)  IGHV5-51*01  181  ............C.............................T...T.A.........A..........AG...................  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  M  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  A  V  S  S 
                    Query_8982   274  ACCGCCATGTATTACTGTGCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCA  363
V  93.2% (272/292)  IGHV5-51*01  271  ......................--------------------------------------------------------------------  292
                                       T  A  M  Y  Y  C  A                                                                      
D  100.0% (7/7)     IGHD6-6*01   12   ------------------------------------.......-----------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    ------------------------------------------------.......A......................A...........  47

                                       
                                       
                    Query_8982   364  G  364
J  95.3% (41/43)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_302390

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           405     4e-115
IGHD4-17*01                                                                                           12.2    37    
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCG	CGGTGA	AATCGACGGAGTA	TACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGCGGTGAAATCGACGGAGTATACCACTACAACAGTATGGACGTC	ARLRGEIDGVYHYNSMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  S  Y
                    Query_8983   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCCGGATACAGCTTTATTAGTTA  90
V  94.8% (274/289)  IGHV5-51*03  6    .....................................................................T.............CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_8983   91   TTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCCGGTGACTCGGATACCAGATACAACCC  180
V  94.8% (274/289)  IGHV5-51*03  96   C........C.....................................................T........T.............G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  M  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_8983   181  ATCCTTCGAAGGCCAGGTCACCATCTCCGTCGACATGTCCATCAGCACCGCCTACCTCCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (274/289)  IGHV5-51*03  186  G......C...................A.C.....A.....................G................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  L  R  G  E  I  D  G  V  Y  H  Y  N  S  M  D  V  W  G  Q  G  T  T  V  T
                    Query_8983   271  CATGTATTACTGTGCGAGACTTCGCGGTGAAATCGACGGAGTATACCACTACAACAGTATGGACGTCTGGGGCCAAGGGACCACGGTCAC  360
V  94.8% (274/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD4-17*01  7    ------------------------......------------------------------------------------------------  12
J  94.7% (54/57)    IGHJ6*02     6    -------------------------------------------...T.....T..G..................................  52

                                                
                                        V  S  S 
                    Query_8983   361  CGTCTCCTCA  370
J  94.7% (54/57)    IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_215225

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           322     2e-90
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCT	GTGGCTGG	AAAAGCAGTCCG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTGTGGCTGGAAAAGCAGTCCGTGATGCTTCTGATATC	ARSVAGKAVRDASDI	237	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	105	9	0	92.1
CDR3-IMGT (germline)	237	242	6	6	0	0	100
Total	N/A	N/A	230	218	12	0	94.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_8984   13   GTGCAGCCTCTGGATTCACCTTCAGTGACTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATAT  102
V  94.8% (218/230)  IGHV3-30*04  65   ..........................AG..............................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  Y  D  G  S  H  K  Y  Y  A  D  S  V  K  G  R  L  T  V  S  R  D  N  S  E  N  T  L  Y  V  
                    Query_8984   103  CATATGATGGAAGTCATAAATACTATGCAGACTCCGTGAAGGGCCGACTCACCGTCTCCAGAGACAATTCCGAGAACACGCTCTATGTGC  192
V  94.8% (218/230)  IGHV3-30*04  155  ..............A..........C.....................T.....A.................A..........G...C...  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      Q  V  N  S  L  R  P  E  D  T  A  M  Y  Y  C  A  R  S  V  A  G  K  A  V  R  D  A  S  D  I  
                    Query_8984   193  AAGTGAACAGCCTGAGACCTGAGGACACGGCTATGTATTACTGTGCGAGATCTGTGGCTGGAAAAGCAGTCCGTGATGCTTCTGATATCT  282
V  94.8% (218/230)  IGHV3-30*04  245  ..A..............G..............G.................----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------........-----------------------------  18
J  89.6% (43/48)    IGHJ3*02     1    -------------------------------------------------------------------------........T........  17

                                                                     
                                      W  G  R  G  T  V  V  I  V  S  S
                    Query_8984   283  GGGGCCGAGGGACAGTGGTCATCGTGTCTTC  313
J  89.6% (43/48)    IGHJ3*02     18   ......A.......A......C...C.....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_215224

Length=317
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         366     2e-103
IGHD5-12*01                                                                                           10.3    111   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	GTGGC	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGCGGCCTAC	ARVAAY	241	258	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	111	3	0	97.4
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	240	6	0	97.6


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  V  R  Q  P  P  G  K  G  L 
                    Query_8985     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCATCAGCAGTGGTTACTACTGGGGCTGGGTCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  97.6% (240/246)  IGHV4-38-2*01  49   ...............................................................A..........................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  I  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S  K 
                    Query_8985     91   GAGTGGATTGGGATTATCTACCATAGTGGGAGCACCTACTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTAGACACGTCCAAG  180
V  97.6% (240/246)  IGHV4-38-2*01  139  .............G......T...................................G.................................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----CDR3-IMGT--->            
                                         N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  A  A  Y  W  G  Q  G 
                    Query_8985     181  AACCAGTTCTCCCTGAAGCTGAACTCTGTTACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGTGGCGGCCTACTGGGGCCAGGGA  270
V  97.6% (240/246)  IGHV4-38-2*01  229  ......................G......G....................................------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (5/5)     IGHD5-12*01    10   ------------------------------------------------------------------.....-------------------  14
J  97.4% (37/38)    IGHJ4*02       11   --------------------------------------------------------------------------................  26

                                                              
                                         I  L  V  T  V  S  S  
                    Query_8985     271  ATCCTGGTCACCGTCTCCTCAG  292
J  97.4% (37/38)    IGHJ4*02       27   .C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30621390


Query= Query_165676

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGTCCCGACTGAACTACGGCATGGACGTC	ARLMSRLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  S  N  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_8986   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATCAGCAATTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G.........T.G................A............................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_8986   91   TGGATTGAGTACATCTATTACAGGGGGAGTCCCAATAACGACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G...T...........T.....CA....CT..A..................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_8986   181  CAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTAATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  .............A.C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  96.0% (48/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8986   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  309
J  96.0% (48/50)    IGHJ6*02     24   ...................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_165677

Length=489
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           286     2e-79
IGHD3-16*01                                                                                           14.1    12   
IGHJ3*01                                                                                              14.1    26   


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCC	CTTATAC	ATCCTCCCCCCAAAGGGCGGGCTCCCCCTTCCCCGGGGCCCCGCCCAGGACCCGTTCCCCCCTGAC	CCAAG	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	101	13	0	88.6
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	215	32	0	87


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  R  R  N  T  D  F  W  V  W  I  R  Q  P  P  G  K  G  
                    Query_8987   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGGAGGAATACTGACTTCTGGGTCTGGATCCGGCAGCCCCCCGGGAAGGGGC  93
V  87.0% (215/247)  IGHV4-39*01  50   .....TCC...A....C.......................C..T.G..G.T...A.....G.........C........A..........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  A  I  H  Y  T  G  S  T  Y  Y  N  S  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_8987   94   TGGAGTGGATTGGGGCGATCCATTATACTGGGAGCACCTATTACAACTCGTCCCTCAAGAGTCGAGTCACCATCTCCGTGGACACGTCCA  183
V  87.0% (215/247)  IGHV4-39*01  140  ..............AGT...T......G............C......C.........................A.....A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT---------------------------------------------------->                            
                                      R  N  Q  F  S  L  N  L  R  S  V  T  A  T  D  T  S  V  F  Y  C  A  R  A  P  Y  T  S  S  P  
                    Query_8987   184  GGAACCAGTTCTCCCTGAACCTAAGGTCTGTGACCGCCACAGACACGTCTGTTTTCTACTGTGCGAGGGCCCCTTATACATCCTCCCCCC  273
V  87.0% (215/247)  IGHV4-39*01  230  A..................G..G..C............G........G....G.AT...........-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  30   ------------------------------------------------------------------------.......-----------  36

                                                                                                    
                                      Q  R  A  G  S  P  F  P  G  A  P  P  R  T  R  S  P  L  T  Q  G 
                    Query_8987   274  AAAGGGCGGGCTCCCCCTTCCCCGGGGCCCCGCCCAGGACCCGTTCCCCCCTGACCCAAGGG  335
J  100.0% (7/7)     IGHJ3*01     22   -------------------------------------------------------.......  28


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 48493512


Query= Query_165674

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD2-21*01                                                                                           18.0    0.60 
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CAGTTTCTGTCTTAGTTTGGACCGGGGAGT	TTGTGGTGG	N/A	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGGGGAGTTTGTGGTGGTTTTGATATG	ARGSFCLSLDRGVCGGFDM	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  N  G  G  S  L  N  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8988   1    ACCCTGTCCCTCACCTGCGCCGTCAATGGTGGGTCCCTCAATGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAG  90
V  92.2% (226/245)  IGHV4-34*01  49   ....................T...T...........T...G..G.......................................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  Q  S  G  T  T  N  Y  K  P  S  L  K  S  R  V  I  T  S  V  D  T  S  K  N 
                    Query_8988   91   TGGATTGGGGAAATCAATCAAAGTGGCACCACCAACTACAAGCCGTCCCTCAAGAGTCGAGTAATCACATCGGTGGACACGTCCAAGAAT  180
V  92.2% (226/245)  IGHV4-34*01  139  ....................T.....A.G............C....................C.C..T...A..A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  F  C  L  S  L  D  R 
                    Query_8988   181  CAGTTCTCCTTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGG  270
V  92.2% (226/245)  IGHV4-34*01  229  .........C.....C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      ----------------------->                               
                                       G  V  C  G  G  F  D  M  W  G  Q  G  T  M  V  T  V  S  
                    Query_8988   271  GGAGTTTGTGGTGGTTTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTT  325
D  100.0% (9/9)     IGHD2-21*01  7    -----.........-----------------------------------------  15
J  97.6% (40/41)    IGHJ3*02     7    --------------.........C...............................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_165675

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            414     5e-118
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CACA	TACTATCCTTCGGGGAGTT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATACTATCCTTCGGGGAGTTTACTACGGTATGGACGTC	ARAHTILRGVYYGMDV	273	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	30	0	0	100
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	24	3	0	88.9
FR3-IMGT	159	272	114	112	2	0	98.2
CDR3-IMGT (germline)	273	279	7	6	1	0	85.7
Total	N/A	N/A	279	272	7	0	97.5


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  M  S  G  D  S  V  S  S  N  S  A  A  W  N  W  
                    Query_8989   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATGTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGA  90
V  97.5% (272/279)  IGHV6-1*01   26   ..............................................C...........................................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  R  W  Y  T  D  Y  A  V  S  V  K  
                    Query_8989   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCGAGGTGGTATACTGATTATGCAGTCTCTGTGAAAA  180
V  97.5% (272/279)  IGHV6-1*01   116  .......................................................C.A........A............A..........  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_8989   181  GTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTCTATTACT  270
V  97.5% (272/279)  IGHV6-1*01   206  ..................................................................................G.......  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-------------------CDR3-IMGT------------------>                                 
                                      C  A  R  A  H  T  I  L  R  G  V  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_8989   271  GTGCGAGAGCACATACTATCCTTCGGGGAGTTTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  353
V  97.5% (272/279)  IGHV6-1*01   296  ....A....--------------------------------------------------------------------------  304
                                      C  A  R                                                                            
D  89.5% (17/19)    IGHD3-10*01  5    -------------......GG...........---------------------------------------------------  23
J  100.0% (51/51)   IGHJ6*02     12   --------------------------------...................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_165672

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-10*01                                                                                           44.9    5e-09 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTT	GTATTACTTTGGTTCGGGGAGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTGTATTACTTTGGTTCGGGGAGTTATTCGGACTAC	ARSLYYFGSGSYSDY	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  N  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_8990   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTAACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  97.6% (242/248)  IGHV4-31*03  50   .....TCC...A......................................T.......................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_8990   94   TGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  97.6% (242/248)  IGHV4-31*03  140  ..............T...........................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  F  G  S  
                    Query_8990   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGATCCTTGTATTACTTTGGTTCGG  273
V  97.6% (242/248)  IGHV4-31*03  230  ....................................................................----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  96.2% (25/26)    IGHD3-10*01  1    -------------------------------------------------------------------------........A........  17

                                      ---------------->                                  
                                      G  S  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8990   274  GGAGTTATTCGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  96.2% (25/26)    IGHD3-10*01  18   .........------------------------------------------  26
J  100.0% (40/40)   IGHJ4*02     9    -----------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_133582

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           346     2e-97
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGTCGTCGAGGGCACACGACATT	TATAGCAGTGGCTGG	GGGAGGCCGGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGTCGTCGAGGGCACACGACATTTATAGCAGTGGCTGGGGGAGGCCGGCTGACTAC	ARASSRAHDIYSSGWGRPADY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  D  S  G  F  T  F  S  S  H  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_8991   1    GGTCCCTGAGACTCTCCTGTGCAGACTCTGGATTCACCTTCAGTAGCCACGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-30*03  47   ........................C......................T.T........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  S  Y  E  G  S  T  K  Y  Y  V  D  S  V  K  G  R  F  T  A  S  R  D  N  S  
                    Query_8991   91   AGTGGGTGGCTTTTATATCATATGAAGGAAGTACTAAATACTATGTAGACTCCGTGAAGGGCCGGTTCACCGCCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-30*03  137  ..........AG.............T.......A...........C..................A......AT.................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  A  S  S  R  A  H  D  
                    Query_8991   181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGAGCTGATGACACGGCTGTCTATTACTGTGCGAGAGCGTCGTCGAGGGCACACGACA  270
V  94.4% (235/249)  IGHV3-30*03  227  .......G................................G...........G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      DR3-IMGT-------------------------->                                  
                                      I  Y  S  S  G  W  G  R  P  A  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_8991   271  TTTATAGCAGTGGCTGGGGGAGGCCGGCTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  339
D  100.0% (15/15)   IGHD6-19*01  4    --...............----------------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    ----------------------------..............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_165671

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           371     6e-105
IGHD3-9*01                                                                                            12.2    31    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCGGACCCACG	GACTGG	GACCGG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCGGACCCACGGACTGGGACCGGACTTTGACGAC	AKRTHGLGPDFDD	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	242	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_8992   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (242/247)  IGHV3-23*01  47   .....................................C.......G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  A  T  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_8992   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGCTACCACATACTACACAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  98.0% (242/247)  IGHV3-23*01  137  ..............................G..G..........G.............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  R  T  H  G  L  G  P  
                    Query_8992   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGCGGACCCACGGACTGGGACCGG  270
V  98.0% (242/247)  IGHV3-23*01  227  ...................................................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-9*01   16   ------------------------------------------------------------------------------......------  21

                                      ---------->                                  
                                      D  F  D  D  W  G  Q  G  S  R  V  T  V  S  S  
                    Query_8992   271  ACTTTGACGACTGGGGCCAGGGAAGCCGGGTCACCGTCTCCTCAG  315
J  93.3% (42/45)    IGHJ4*02     4    ........T...............C..T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_179099

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           338     5e-95
IGHD3-10*02                                                                                           10.3    134  
IGHJ4*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	CAGGAGATGGCCTCA	ATGTT	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAGGAGATGGCCTCAATGTTCTTTGACTAC	VRQEMASMFFDY	287	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	69	5	0	93.2
CDR1-IMGT	77	100	24	16	8	0	66.7
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	172	21	17	4	0	81
FR3-IMGT	173	286	114	98	16	0	86
CDR3-IMGT (germline)	287	292	6	5	1	0	83.3
Total	N/A	N/A	290	253	37	0	87.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  T  A  S  G  L  K  V  S  
                    Query_8993   3    AGGTTCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCGGGGGGGTCTCTGAGACTCTCCTGTACAGCCTCTGGATTAAAAGTCAGTA  92
V  87.2% (253/290)  IGHV3-53*01  2    ....G.........G.........................T........C...............G..........G..C.CC.......  91
                                         V  Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  

                                      T------><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------
                                      I  N  D  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  Y  S  D  G  R  T  H  Y  A  
                    Query_8993   93   TAAATGACATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCGCACTTATCTATAGCGATGGCAGAACACACTACGCAG  182
V  87.2% (253/290)  IGHV3-53*01  92   GC..CT.......C.......................................T..G....T.......G...T..C...T.........  181
                                      S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      D  S  V  K  G  R  I  T  L  S  R  D  T  S  K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  
                    Query_8993   183  ACTCCGTCAAGGGCCGAATCACCCTCTCCAGAGACACGTCCAAGAACACCTTATATCTTCAAATGAACAGCCTGCGAGTCGACGACACTG  272
V  87.2% (253/290)  IGHV3-53*01  182  .......G.........T.....A............AT...........GC.G.....................A...C...G.....G.  271
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  

                                      -------------><-------------CDR3-IMGT------------>                                  
                                      A  L  Y  Y  C  V  R  Q  E  M  A  S  M  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8993   273  CCCTATATTATTGTGTGAGACAGGAGATGGCCTCAATGTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  87.2% (253/290)  IGHV3-53*01  272  ..G.G.....C....C....----------------------------------------------------------------  291
                                      A  V  Y  Y  C  A  R                                                                 
D  100.0% (5/5)     IGHD3-10*02  9    -----------------------------------.....--------------------------------------------  13
J  100.0% (44/44)   IGHJ4*02     5    ----------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_195388

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           318     6e-89
IGHD4-17*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCGGGGAGAGATT	CTACGGTGACT	CGGTTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCGGGGAGAGATTCTACGGTGACTCGGTTTACTAC	AKVGERFYGDSVYY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  T  S  G  F  I  F  S  D  Y  D  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_8994   1    GGTCCCTGAGACTCTCCTGTACAACCTCAGGATTCATCTTTAGCGATTATGACCTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-23*01  47   ....................G..G....T.......C.......AGC....C.A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  T  D  V  G  D  R  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  H  T  S  
                    Query_8994   91   AGTGGGTCTCAACTATTACTGATGTTGGTGATAGGACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGACACACTTCCA  180
V  90.8% (226/249)  IGHV3-23*01  137  ...........G......G..G.AG.....G...C.............................................G...A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  N  T  L  Y  L  Q  M  N  S  L  K  A  E  D  T  A  V  Y  Y  C  A  K  V  G  E  R  F  Y  G  
                    Query_8994   181  GGAACACACTGTATCTGCAAATGAACAGCCTGAAAGCCGAGGACACGGCCGTATATTATTGTGCGAAAGTCGGGGAGAGATTCTACGGTG  270
V  90.8% (226/249)  IGHV3-23*01  227  A......G.........................G........................C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD4-17*01  4    ----------------------------------------------------------------------------------........  11

                                      ------------->                                  
                                      D  S  V  Y  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_8994   271  ACTCGGTTTACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  318
D  100.0% (11/11)   IGHD4-17*01  12   ...---------------------------------------------  14
J  97.4% (38/39)    IGHJ4*02     10   ---------...........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_165678

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD1-26*01                                                                                           23.8    0.012 
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGTATGCCGTCC	TGGGAGCTACTA	GT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTATGCCGTCCTGGGAGCTACTAGTTGGTTCGACCCC	AKYAVLGATSWFDP	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	268	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  E  P  G  E  S  L  R  I  S  C  R  G  S  G  Y  T  F  I  S  Y
                    Query_8995   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAGAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGCTCTGGGTACACCTTTATTAGTTA  90
V  93.4% (268/287)  IGHV5-51*01  6    ....................C..........A..................A...........A...T.....A....G.....CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  N  P
                    Query_8995   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGAGACCAGATACAACCC  180
V  93.4% (268/287)  IGHV5-51*01  96   C.......G...........................................A......................T..........G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  L  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  S  L  K  A  S  D  T  A
                    Query_8995   181  GTCCTTCCAAGGCCACGTCACCCTCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCACTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (268/287)  IGHV5-51*01  186  ...............G......A.....................G...............G.............................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  K  Y  A  V  L  G  A  T  S  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_8995   271  CATGTATTACTGTGCGAAGTATGCCGTCCTGGGAGCTACTAGTTGGTTCGACCCCTGGGGCCAGGGAACCCTAGTCATCGTCTCCTCAG  359
V  93.4% (268/287)  IGHV5-51*01  276  .................------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                          
D  100.0% (12/12)   IGHD1-26*01  8    -----------------------------............------------------------------------------------  19
J  95.7% (44/46)    IGHJ5*02     6    -------------------------------------------.............................G....C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_165679

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGCGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGCGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_8996   1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  87.0% (214/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_8996   91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCACCATCTCAGTAGACAAGTCCAAG  180
V  87.0% (214/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A................A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_8996   181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGCGGCACTCGG  270
V  87.0% (214/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_8996   271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_319093

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_8997   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ......................................C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_8997   91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P 
                    Query_8997   181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC  270
V  90.6% (221/244)  IGHV4-59*01  229  ...........G...C....C...........T............G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  95.7% (44/46)    IGHJ5*02     6    ------------------------------------------------------------------------------............  17

                                                                        
                                       W  G  Q  G  A  L  V  S  V  S  S  
                    Query_8997   271  TGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  304
J  95.7% (44/46)    IGHJ5*02     18   ............A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_319092

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           360     1e-101
IGHD3-22*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAC	TTACTATGATAG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAACTTACTATGATAGACTACTTTGACTAC	ARQLTMIDYFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_8998   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (239/248)  IGHV3-11*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  R  W  V  D  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_8998   91   AGTGGGTTTCATACATTAGCCGTTGGGTTGATACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  96.4% (239/248)  IGHV3-11*01  137  ...................TA..A.T.G.AG...........................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  L  T  M  I  D  Y  
                    Query_8998   181  AGAACTCACTGTATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAGACAACTTACTATGATAGACTACT  270
V  96.4% (239/248)  IGHV3-11*01  227  .......................A............................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD3-22*01  4    ------------------------------------------------------------------------............------  15
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8998   271  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (48/48)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_319091

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           367     6e-104
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AACCGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	AKPSSASGWHFDN	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	261	26	0	90.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_8999   1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCAGTTA  90
V  90.9% (261/287)  IGHV5-51*03  6    .........................G.............G.........................G.........C.GC..T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  D  I  R  Y  S  P
                    Query_8999   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGATATTAGATATAGTCC  180
V  90.9% (261/287)  IGHV5-51*03  96   C.......G..................................................AT...GG...........CC.....C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  *  L  Q  W  S  S  L  K  A  A  D  T  G
                    Query_8999   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTAACTGCAGTGGAGCAGCCTGAAGGCCGCGGACACCGG  270
V  90.9% (261/287)  IGHV5-51*03  186  .............................C..A.AA........G.........C........................T.........C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  K  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_8999   271  CATGTATTACTGTGCGAAACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  90.9% (261/287)  IGHV5-51*03  276  .................---------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                       
D  100.0% (10/10)   IGHD6-19*01  9    ------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_101884

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           213     2e-57
IGHD3-16*01                                                                                           25.7    0.003
IGHJ3*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACCTAT	GTTTGGGGGAGTT	TACGCCGCAATCACGATTGCCTTAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACCTATGTTTGGGGGAGTTTACGCCGCAATCACGATTGCCTTACTGTC	ARGLLIEDPTYVWGSLRRNHDCLTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	35	16	0	68.6
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	87	27	0	76.3
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	190	54	0	77.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  V  R  Q  P  P  G  G  G  L  Q 
                    Query_9000   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGAACTTACTACTGGCACTGGGTGCGGCAACCTCCAGGGGGGGGTCTGCAG  90
V  77.9% (190/244)  IGHV4-59*01  49   .......................C.......G.......A.T.G..........AG....A.C.....G..C......AA...A...G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  A  M  F  L  S  T  G  T  T  L  Y  N  P  S  V  R  G  R  V  T  V  S  G  D  M  S  R  N 
                    Query_9000   91   TGGCTTGCCATGTTCTTATCCACTGGGACCACCCTCTACAACCCCTCCGTCAGGGGTCGTGTCACCGTGTCGGGCGACATGTCTCGGAAT  180
V  77.9% (190/244)  IGHV4-59*01  139  ...A...GGTATA...AT.A..G.....G....AA.............C...A.A....A......A.A..A.TA....C...CAA...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_9000   181  CAGTTGTCCCTCAACCTCATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACCTAT  270
V  77.9% (190/244)  IGHV4-59*01  229  .....C.....G..G..G.G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  L  R  R  N  H  D  C  L  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_9000   271  GTTTGGGGGAGTTTACGCCGCAATCACGATTGCCTTACTGTCTGGGGCCAGGGGACACCGGTCACCGTCTCTTCAG  346
D  100.0% (13/13)   IGHD3-16*01  14   .............---------------------------------------------------------------  26
J  92.1% (35/38)    IGHJ3*01     13   --------------------------------------............A......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_319097

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            414     5e-118
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CACA	TACTATCCTTCGGGGAGTT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATACTATCCTTCGGGGAGTTTACTACGGTATGGACGTC	ARAHTILRGVYYGMDV	273	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	30	0	0	100
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	24	3	0	88.9
FR3-IMGT	159	272	114	112	2	0	98.2
CDR3-IMGT (germline)	273	279	7	6	1	0	85.7
Total	N/A	N/A	279	272	7	0	97.5


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  M  S  G  D  S  V  S  S  N  S  A  A  W  N  W  
                    Query_9001   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATGTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGA  90
V  97.5% (272/279)  IGHV6-1*01   26   ..............................................C...........................................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  R  W  Y  T  D  Y  A  V  S  V  K  
                    Query_9001   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCGAGGTGGTATACTGATTATGCAGTCTCTGTGAAAA  180
V  97.5% (272/279)  IGHV6-1*01   116  .......................................................C.A........A............A..........  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_9001   181  GTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTCTATTACT  270
V  97.5% (272/279)  IGHV6-1*01   206  ..................................................................................G.......  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-------------------CDR3-IMGT------------------>                                 
                                      C  A  R  A  H  T  I  L  R  G  V  Y  Y  G  M  D  V  W  X  Q  G  T  T  V  T  V  S  S 
                    Query_9001   271  GTGCGAGAGCACATACTATCCTTCGGGGAGTTTACTACGGTATGGACGTCTGGNNCCAAGGGACCACGGTCACCGTCTCCTCA  353
V  97.5% (272/279)  IGHV6-1*01   296  ....A....--------------------------------------------------------------------------  304
                                      C  A  R                                                                            
D  89.5% (17/19)    IGHD3-10*01  5    -------------......GG...........---------------------------------------------------  23
J  96.1% (49/51)    IGHJ6*02     12   --------------------------------.....................GG............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_319096

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD6-25*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAGG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTC	ARQSSAGRTRYGMDV	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	277	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  
                    Query_9002   3    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATTCGACTTTACCG  92
V  93.9% (277/295)  IGHV5-51*01  2    ..G.....................................C.............................T.......A.AG.......A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  V  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  P  D  T  R  Y  
                    Query_9002   93   ACTACTGGATCGTCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACCCTGATACGAGATACA  182
V  93.9% (277/295)  IGHV5-51*01  92   G...........G..............T..............................................T.......C.......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  G  L  K  A  S  D  
                    Query_9002   183  GTCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACA  272
V  93.9% (277/295)  IGHV5-51*01  182  .C...............................C.............A.......................A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  F  C  A  R  Q  S  S  A  G  R  T  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_9002   273  CCGCCATGTATTTTTGTGCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCT  362
V  93.9% (277/295)  IGHV5-51*01  272  ............AC...........-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD6-25*01  7    --------------------------.......---------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -----------------------------------------------...........................................  57

                                           
                                      S  S 
                    Query_9002   363  CGTCA  367
J  97.9% (47/48)    IGHJ6*02     58   .C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_319095

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           343     2e-96
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATGG	GGTTCGAGGA	CACTCGACCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTTCGAGGACACTCGACCGTTTTTGATATC	ARDGVRGHSTVFDI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	231	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  N  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9003   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTAACTCTTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (231/243)  IGHV4-59*08  49   ........................................G....T...AC.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_9003   91   TGGATTGGGTATATCTATTACAGTGGGGGCACCAACTATAATCCCTCCCTTAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  95.1% (231/243)  IGHV4-59*08  139  ...........................A..........C..C........C.....................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  V  R  G  H  S  T  V 
                    Query_9003   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGATGGGGTTCGAGGACACTCGACCGTT  270
V  95.1% (231/243)  IGHV4-59*08  229  ....................C........C.......................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD3-10*01  11   --------------------------------------------------------------------......G...------------  20
J  93.2% (41/44)    IGHJ3*02     7    -----------------------------------------------------------------------------------------.  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  T  I  I  V  S  S  
                    Query_9003   271  TTTGATATCTGGGGCCAAGGGACAACGATCATCGTCTCTTCAG  313
J  93.2% (41/44)    IGHJ3*02     8    .........................T.G...C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_101880

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           279     3e-77
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	216	28	6	86.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_9004   4    CCCTGAGACTCTCCTGTGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.4% (216/250)  IGHV4-34*01  50   .....TCC...A....C.....C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_9004   94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.4% (216/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_9004   184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.4% (216/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_9004   274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_101889

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            332     3e-93
IGHD1-26*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAAGGCG	GCTACTAC	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAAGGCGGCTACTACCCCTTTGACTAC	ARDKGGYYPFDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	10	1	0	90.9
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	51	0	0	100
CDR2-IMGT	102	125	24	23	1	0	95.8
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	232	222	10	0	95.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  G  T  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  
                    Query_9005   16   GTACAGCCTCTGGATTCACCTTTGGTACCTTTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAA  105
V  95.7% (222/232)  IGHV3-7*03   65   ..G....................A...G..A...........................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  V  Y  L  
                    Query_9005   106  ACCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAAAACTCAGTGTATCTGC  195
V  95.7% (222/232)  IGHV3-7*03   155  .G.......................................................................G......C.........  244
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-------------CDR3-IMGT------------>          
                                      Q  M  N  G  L  R  G  E  D  T  A  L  Y  Y  C  A  R  D  K  G  G  Y  Y  P  F  D  Y  W  G  Q  
                    Query_9005   196  AAATGAACGGCCTGAGAGGCGAGGACACGGCCCTGTATTACTGTGCGAGAGATAAAGGCGGCTACTACCCCTTTGACTACTGGGGCCAGG  285
V  95.7% (222/232)  IGHV3-7*03   245  ........A.........C.............G...................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (8/8)     IGHD1-26*01  13   ------------------------------------------------------------........----------------------  20
J  97.4% (38/39)    IGHJ4*02     5    ----------------------------------------------------------------------....................  24

                                                         
                                      G  T  P  V  T  V  S
                    Query_9005   286  GAACCCCGGTCACCGTCTC  304
J  97.4% (38/39)    IGHJ4*02     25   ......T............  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_34457

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            353     9e-100
IGHD6-13*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCGAGGG	GCAGCAGTTGGTAC	CATT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCGAGGGGCAGCAGTTGGTACCATTCTACGTTGACTCC	ARFEGQQLVPFYVDS	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	236	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9006   1    ACTCTGTCCCTCACCTGCGCTGTCTCTGGTGGATCCATTAGTAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.9% (236/246)  IGHV4-4*02   49   ..C.............................C.....C..C................................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_9006   91   GAGTGGATTGGTGAAATCCATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCTAAG  180
V  95.9% (236/246)  IGHV4-4*02   139  ...........G......T...................................................................C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  E  G  Q  Q  L  V  P 
                    Query_9006   181  AACCACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGATTCGAGGGGCAGCAGTTGGTACCA  270
V  95.9% (236/246)  IGHV4-4*02   229  .....G...........G....G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  92.9% (13/14)    IGHD6-13*01  8    --------------------------------------------------------------------------.......C......--  21

                                      -------------->                                  
                                       F  Y  V  D  S  W  G  Q  G  T  L  V  T  A  S  S  
                    Query_9006   271  TTCTACGTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGCCTCCTCAG  319
J  93.6% (44/47)    IGHJ4*02     2    --....T......A..........................T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_161685

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           374     9e-106
IGHD5-12*01                                                                                           14.1    9.9   
IGHJ3*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTCCGTTTCGTAGAGACGC	CTACAATTAC	CGGACCACC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTCCGTTTCGTAGAGACGCCTACAATTACCGGACCACCGATGCTTTTGATATC	ARDRPFRRDAYNYRTTDAFDI	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	265	26	0	91.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  P  E  V  K  K  P  G  S  S  V  T  V  S  C  K  A  S  G  G  T  L  T  T  S
                    Query_9007   1    GCAGCTGGTGCAGTCTGGGCCTGAGGTGAAGAAGCCTGGGTCCTCGGTGACGGTCTCCTGCAAGGCTTCTGGAGGCACCCTCACCACCTC  90
V  91.1% (265/291)  IGHV1-69*01  6    ...................G..............................A............................T...G..G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  G  F  I  P  A  F  H  T  T  N  S  A  Q
                    Query_9007   91   TGTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGAGGCTTCATCCCTGCCTTTCATACAACAAACTCCGCACA  180
V  91.1% (265/291)  IGHV1-69*01  96   ..C...........................................A.......GA........AT....GG....G......A......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  S  A  D  V  S  T  S  T  A  Y  M  V  L  S  S  L  T  S  A  D  T  A
                    Query_9007   181  GAAGTTCCAGGGCAGGGTCACAATGAGTGCGGACGTTTCCACGAGCACAGCCTACATGGTGCTGAGCAGCCTGACATCTGCGGACACGGC  270
V  91.1% (265/291)  IGHV1-69*01  186  ...............A.....G..T.CC.......AA......................A..............G.....A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        V  Y  Y  C  A  R  D  R  P  F  R  R  D  A  Y  N  Y  R  T  T  D  A  F  D  I  W  G  Q  G  T
                    Query_9007   271  CGTGTATTACTGTGCGAGAGATCGTCCGTTTCGTAGAGACGCCTACAATTACCGGACCACCGATGCTTTTGATATCTGGGGCCAAGGGAC  360
V  91.1% (265/291)  IGHV1-69*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  90.0% (9/10)     IGHD5-12*01  14   ------------------------------------------....G.....--------------------------------------  23
J  98.0% (48/49)    IGHJ3*02     2    -------------------------------------------------------------.............................  30

                                                          
                                        L  V  T  V  S  S  
                    Query_9007   361  ACTGGTCACCGTCTCTTCAG  380
J  98.0% (48/49)    IGHJ3*02     31   .A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_34455

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           333     1e-93
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACAAGGGGATAA	CTATAGTTAC	GAATCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACAAGGGGATAACTATAGTTACGAATCT	AQGDNYSYES	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	241	2	2	0	0	100
Total	N/A	N/A	241	227	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  W  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9008   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTTGGAACTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.2% (227/241)  IGHV3-53*01  47   ............................................A.C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  A  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  K  
                    Query_9008   91   AGTGGGTCTCAGTCATTTATGCCGGTGGTAGCACATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  94.2% (227/241)  IGHV3-53*01  137  .............T......AG...............C..C........................................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------CDR3-IMGT---------> 
                                      K  V  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  Q  G  D  N  Y  S  Y  E  S  
                    Query_9008   181  AAGTGTTGTATCTTCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCACAAGGGGATAACTATAGTTACGAATCTT  270
V  94.2% (227/241)  IGHV3-53*01  227  .CAC.C.............G.........................................-----------------------------  287
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  90.0% (9/10)     IGHD5-18*01  11   -------------------------------------------------------------------------....G.....-------  20
J  97.1% (33/34)    IGHJ4*02     15   -----------------------------------------------------------------------------------------.  15

                                                                       
                                      W  G  R  G  T  L  V  T  V  S  S  
                    Query_9008   271  GGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  303
J  97.1% (33/34)    IGHJ4*02     16   ......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_122194

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           341     5e-96
IGHD3-3*01                                                                                            35.3    4e-06
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATGGTAAAAGA	GATTTTTGGAGTGGTTTTTAT	TTAGGGTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATGGTAAAAGAGATTTTTGGAGTGGTTTTTATTTAGGGTAT	ARNGKRDFWSGFYLGY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_9009   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGCAGTTATGGCATGTACTGGGTCCGGCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (233/248)  IGHV3-33*01  47   ...........................................T..C.........C..........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  M  A  V  I  W  N  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  N  
                    Query_9009   91   AGTGGATGGCAGTTATATGGAATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATAACA  180
V  94.0% (233/248)  IGHV3-33*01  137  .....G..............T..................................................A..............TC..  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  N  G  K  R  D  F  W  
                    Query_9009   181  AGAGCACGCTCTATCTGCAAATGGACAGTCTGAGGGCCGAGGACACGGCTGTGTATTATTGTGCGAGAAATGGTAAAAGAGATTTTTGGA  270
V  94.0% (233/248)  IGHV3-33*01  227  ...A......G............A....C.....A.......................C.........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.2% (20/21)    IGHD3-3*01   8    --------------------------------------------------------------------------------..........  17

                                      T------------------>                                  
                                      S  G  F  Y  L  G  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9009   271  GTGGTTTTTATTTAGGGTATTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  324
D  95.2% (20/21)    IGHD3-3*01   18   ......A....-------------------------------------------  28
J  97.1% (33/34)    IGHJ4*02     15   --------------------............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_7238

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           12.2    30   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTGGC	GGCTGG	CTTAC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTGGCGGCTGGCTTACGGACGTC	TRGGGWLTDV	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	215	28	0	88.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  Y  T  V  S  G  G  S  I  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_9010   4    CCCTGAGACTCTCCTACACTGTCTCTGGAGGCTCCATCAGTGGTTTCTACTGGAGCTGGATTCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  88.5% (215/243)  IGHV4-59*01  50   .....TCC...A...G............T............A...A...............C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  N  I  H  Y  S  G  H  T  N  Y  N  P  S  L  R  S  R  V  I  I  S  L  D  T  S  N  N  
                    Query_9010   94   GGATTGGGAATATCCACTACAGTGGGCACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCATCATATCGCTGGACACGTCCAACAACC  183
V  88.5% (215/243)  IGHV4-59*01  140  ........T.....T.T.........AG.......................A...........C......AG.A...........G....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------CDR3-IMGT--------->    
                                      Q  I  S  L  K  V  N  S  G  T  A  A  D  T  A  L  Y  Y  C  T  R  G  G  G  W  L  T  D  V  W  
                    Query_9010   184  AGATCTCCCTGAAGGTGAACTCTGGGACCGCTGCGGACACGGCCCTCTATTATTGTACGAGAGGTGGCGGCTGGCTTACGGACGTCTGGG  273
V  88.5% (215/243)  IGHV4-59*01  230  ..T...........C...G.....T...................G.G.....C...G......---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD6-19*01  13   --------------------------------------------------------------------......----------------  18
J  100.0% (40/40)   IGHJ6*02     23   -------------------------------------------------------------------------------...........  33

                                                                   
                                      G  Q  G  T  T  V  T  V  S  S 
                    Query_9010   274  GCCAAGGGACCACGGTCACCGTCTCCTCA  302
J  100.0% (40/40)   IGHJ6*02     34   .............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_264084

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           251     9e-69
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	GCCCACCGGGTG	AGCAATGGCTGG	GGAAGGTACTATAATAAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCCCACCGGGTGAGCAATGGCTGGGGAAGGTACTATAATAATGGTATGGACGCC	ARAHRVSNGWGRYYNNGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	20	4	6	66.7
FR2-IMGT	60	110	51	44	7	0	86.3
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	100	14	0	87.7
CDR3-IMGT (germline)	246	251	6	5	1	0	83.3
Total	N/A	N/A	248	206	36	6	83.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  T  A  N  D  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_9011   4    CCCTGAGACTCTCCTGCGCTGTGTACGGTGGGTCTTTCACTGCCAATGATTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  83.1% (206/248)  IGHV4-34*12  50   .....TCC...A..........C..T........C....G..G------...C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G        Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  H  L  G  G  A  K  Y  N  P  S  L  Q  S  R  V  T  I  S  L  D  T  S  
                    Query_9011   94   TGGAATGGATAGGGGAAATCATTCATCTTGGAGGCGCCAAGTACAACCCGTCCCTCCAGAGTCGAGTTACCATTTCACTAGACACGTCCA  183
V  83.1% (206/248)  IGHV4-34*12  134  ....G.....T...............AG....A..A....C...............A..........C.....A...G............  223
                                      L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  N  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  A  H  R  V  S  N  G  
                    Query_9011   184  AGAATCAATTCTCCCTGAAATTGAATTCTGTTAGCGCCGCGGACACGGCTGTGTATTATTGTGCAAGAGCCCACCGGGTGAGCAATGGCT  273
V  83.1% (206/248)  IGHV4-34*12  224  ....C..G...........GC...GC.....G.C........................C.....G...----------------------  291
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  R  Y  Y  N  N  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_9011   274  GGGGAAGGTACTATAATAATGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  93.3% (42/45)    IGHJ6*02     18   --------------------..........T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_161689

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*04                                                                                           293     2e-81
IGHD2-21*01                                                                                           10.3    124  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*04	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATAAAGACCCCGGAGGGCGC	CTATT	TCTCG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATAAAGACCCCGGAGGGCGCCTATTTCTCGTACTACGGTATGGACGTC	ARIKTPEGAYFSYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	217	30	0	87.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  I  A  S  G  F  T  F  S  D  F  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9012   1    GGTCCCTGAGACTCTCCTGTATAGCCTCTGGATTCACCTTCAGTGATTTTACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGC  90
V  87.9% (217/247)  IGHV3-21*04  47   ....................GC......................AGC.A..G.................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  S  S  G  T  Y  T  Y  Y  A  D  S  L  Q  G  R  F  T  I  A  R  G  N  A  
                    Query_9012   91   AGTGGGTGTCATCCATTAGTAGTAGTGGGACTTACACATACTACGCAGACTCACTTCAGGGCCGATTCACCATCGCCAGAGGCAACGCCA  180
V  87.9% (217/247)  IGHV3-21*04  137  .......C..................A.T.G.....T................G.GA.................T......A........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  R  S  L  Y  L  Q  V  N  S  L  R  T  E  D  T  G  I  Y  Y  C  A  R  I  K  T  P  E  G  A  
                    Query_9012   181  AGAGGTCTCTGTATCTCCAAGTGAACAGCCTGAGAACCGAGGACACCGGCATATATTATTGTGCGAGGATAAAGACCCCGGAGGGCGCCT  270
V  87.9% (217/247)  IGHV3-21*04  227  ...AC..A........G...A..............G..........G.C.G.G.....C........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  22   ----------------------------------------------------------------------------------------..  23

                                      IMGT--------------------->                              
                                      Y  F  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_9012   271  ATTTCTCGTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  326
D  100.0% (5/5)     IGHD2-21*01  24   ...-----------------------------------------------------  26
J  100.0% (48/48)   IGHJ6*02     12   --------................................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_143113

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           285     4e-79
IGHD5-12*01                                                                                           18.0    0.59 
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTGGGGAA	TGGCTACGA	GGGCA	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGATGTGGGGAATGGCTACGAGGGCAACGGTATGGACGTC	TRDVGNGYEGNGMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	216	34	0	86.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  S  H  G  L  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9013   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCAGGATTTACTTTCAGTAGTCATGGCCTGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  86.4% (216/250)  IGHV3-21*01  47   ........................C...T.....C..C........CT..A..A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  P  R  S  D  Y  K  F  Y  T  P  S  V  R  G  R  F  T  I  S  R  D  N  P  
                    Query_9013   91   AGTGGGTCTCGTCCATTACTCCTCGAAGCGATTACAAATTCTACACACCCTCAGTGAGGGGCCGGTTCACCATCTCCAGAGACAACCCCA  180
V  86.4% (216/250)  IGHV3-21*01  137  ..........A.......G.AG.A.T..TAG.....T..A....G..GA........A......A.....................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  E  M  H  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  D  V  G  N  G  Y  E  
                    Query_9013   181  AGAACTCCTTGTATTTGGAAATGCACAGTCTAAGAGCCGAGGACACGGCTGTCTATTACTGTACGAGAGATGTGGGGAATGGCTACGAGG  270
V  86.4% (216/250)  IGHV3-21*01  227  .......AC.....C..C.....A....C..G....................G.........G.......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD5-12*01  11   -------------------------------------------------------------------------------.........--  19

                                      ---------------->                                 
                                      G  N  G  M  D  V  W  G  Q  G  T  T  V  P  V  S  S 
                    Query_9013   271  GCAACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCCCCGTCTCCTCA  320
J  97.9% (46/47)    IGHJ6*02     16   ---...................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_143112

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_9014   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_9014   91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_9014   181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_9014   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_143110

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9015  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01  49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_9015  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01  139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_9015  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01  229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01  13   ----------------------------------------------------------------------.....C..G...--------  24

                                     ----------->                                  
                                      G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_9015  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02    6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_143116

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           399     3e-113
IGHD3-16*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGTCG	ATGACTACGTT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGTCGATGACTACGTTTTTGACTAT	AREVDDYVFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  T  V  S  C  K  A  S  G  D  T  F  R  N  N
                    Query_9016   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGACGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAGAAACAA  90
V  93.8% (273/291)  IGHV1-69*01  6    ..................G...............................A.......................G.........C.G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  F  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  M  F  G  T  V  N  Y  A  Q
                    Query_9016   91   TGCTTTCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATGTTTGGAACAGTCAACTACGCACA  180
V  93.8% (273/291)  IGHV1-69*01  96   ....A...G.........................................................C.....T....CA...........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  Q  D  R  V  T  I  S  A  D  E  S  T  S  T  A  Y  M  E  L  T  S  L  R  S  D  D  T  A
                    Query_9016   181  GAACTTCCAGGACAGAGTCACGATTTCCGCGGACGAATCTACGAGCACAGCCTACATGGAGCTGACCAGCCTGAGATCTGATGACACGGC  270
V  93.8% (273/291)  IGHV1-69*01  186  ...G.......G.............A.............C.........................G...............G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        V  Y  Y  C  A  R  E  V  D  D  Y  V  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9016   271  CGTGTATTACTGTGCGAGAGAGGTCGATGACTACGTTTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  93.8% (273/291)  IGHV1-69*01  276  .....................-----------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                              
D  90.9% (10/11)    IGHD3-16*01  6    --------------------------....T......-------------------------------------------  16
J  97.7% (42/43)    IGHJ4*02     6    -------------------------------------........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_143115

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9017   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9017   91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_9017   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  95.5% (231/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9017   271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_143114

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            417     6e-119
IGHD6-6*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGTGAGGAACCAGCTCGTATCCGACTTC	ARAVRNQLVSDF	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	74	1	0	98.7
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	104	10	0	91.2
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	281	14	0	95.3


Alignments

                                     <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                      Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S 
                    Query_9018  1    CAGATGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCAGC  90
V  95.3% (281/295)  IGHV1-8*01  1    ...G....................................................................................C.  90
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                     GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                      S  Y  D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 
                    Query_9018  91   AGTTATGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTAT  180
V  95.3% (281/295)  IGHV1-8*01  91   .............A.........................................................C..................  180
                                      S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                     -----------------------------------------------FR3-IMGT-----------------------------------
                                      A  E  K  F  Q  G  R  V  T  M  T  G  D  T  S  I  T  T  A  Y  M  E  M  S  S  L  N  S  E  D 
                    Query_9018  181  GCAGAGAAGTTCCAGGGCAGAGTCACCATGACCGGGGACACTTCCATAACCACAGCCTACATGGAGATGAGCAGCCTAAACTCTGAAGAC  270
V  95.3% (281/295)  IGHV1-8*01  181  ...C.............................A..A....C.......G................C..........G.GA.....G...  270
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                     -----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  V  Y  Y  C  A  R  A  V  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9018  271  ACGGCCGTGTATTACTGTGCGAGAGCGGTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  95.3% (281/295)  IGHV1-8*01  271  .........................---------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    ------------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    ------------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_143119

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           380     1e-107
IGHD2-15*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAA	ATATTGTTGTAATGGAAGCTGC	CCCCTCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAAATATTGTTGTAATGGAAGCTGCCCCCTCTCCCTAC	ARGNIVVMEAAPSPY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	70	5	0	93.3
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	19	5	0	79.2
FR3-IMGT	175	288	114	104	10	0	91.2
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	269	26	0	91.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  N  I  S  C  K  A  S  G  Y  T  F  T 
                    Query_9019   1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAATATTTCCTGCAAGGCGTCTGGATACACCTTCACC  90
V  91.2% (269/295)  IGHV1-46*01  1    ...G...................G................................GG.............A..................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  I  I  N  P  S  R  D  S  A  T  Y 
                    Query_9019   91   AGTTATTATGTCCACTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGCAATAATCAACCCGAGTCGTGACAGCGCAACCTAC  180
V  91.2% (269/295)  IGHV1-46*01  91   ..C..C...A.G..........................A................G............T...G...GT...A...G....  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  L  S  M  T  R  D  T  S  T  N  T  V  H  M  E  L  N  S  L  R  P  E  D 
                    Query_9019   181  GCACAGAAGTTCCAGGGCAGACTCAGCATGACCAGGGACACGTCCACTAACACAGTCCACATGGAGCTGAACAGCCTGAGACCTGAGGAC  270
V  91.2% (269/295)  IGHV1-46*01  181  .....................G...C.....................G.G.......T............G..........T........  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  R  G  N  I  V  V  M  E  A  A  P  S  P  Y  W  G  L  G  T  L  V  T  V 
                    Query_9019   271  ACGGCCGTCTATTATTGTGCGAGAGGAAATATTGTTGTAATGGAAGCTGCCCCCTCTCCCTACTGGGGCCTGGGAACACTGGTCACCGTC  360
V  91.2% (269/295)  IGHV1-46*01  271  ........G.....C..........-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  81.8% (18/22)    IGHD2-15*01  4    ----------------------------.......A..GG...T......----------------------------------------  25
J  94.7% (36/38)    IGHJ4*02     11   -----------------------------------------------------------...........A......C............  41

                                             
                                       S  S  
                    Query_9019   361  TCCTCAG  367
J  94.7% (36/38)    IGHJ4*02     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_143118

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            305     3e-85
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCATCTTTCAA	CAGCAGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCATCTTTCAACAGCAGGTACTCGGGGTTTTGACTAC	ASHLSTAGTRGFDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	100	14	0	87.7
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	220	25	0	89.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  V  G  S  I  T  S  A  N  W  W  S  W  V  R  Q  P  P  G  R  G  L 
                    Query_9020   1    ACCCTGTCCCTCACCTGCGATGTCTCTGTTGGCTCCATCACCAGTGCTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAGGGGACTG  90
V  89.8% (220/245)  IGHV4-4*01   49   ...................C........G...........G....AG...................................A...G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  K  S  N  Y  S  P  S  L  R  G  R  V  T  I  S  V  D  K  S  M 
                    Query_9020   91   GAGTGGATTGGGGAAATCTATCATGGTGGGAAGTCCAACTACAGTCCGTCCCTCAGGGGTCGCGTCACCATTTCAGTGGACAAGTCCATG  180
V  89.8% (220/245)  IGHV4-4*01   139  ........................A......GCA.........AC..........A.A....A........A.....A..........A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  A  Y  F  C  A  S  H  L  S  T  A  G  T  R 
                    Query_9020   181  AACCAGTTCTCCCTGAAGCTGAATTCTGTGACCGCCGCGGACACGGCCGCATACTTCTGTGCGAGCCATCTTTCAACAGCAGGTACTCGG  270
V  89.8% (220/245)  IGHV4-4*01   229  ......................GC.........................TG..T.G.........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  90.0% (9/10)     IGHD6-13*01  12   ----------------------------------------------------------------------------....T.....----  21

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9020   271  GGTTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02     6    ---.....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_64415

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           364     5e-103
IGHD3-10*01                                                                                           12.2    32    
IGHJ2*01                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCCGACCCTAGTGAATCTTA	ATTATA	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCCGACCCTAGTGAATCTTAATTATAACTGGTACTTCGATCTC	AKPTLVNLNYNWYFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9021   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (240/247)  IGHV3-23*01  47   ............................T.............................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  D  R  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9021   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGATAGAACATTTTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  97.2% (240/247)  IGHV3-23*01  137  ..............................G...C....AC.................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  T  L  V  N  L  N  
                    Query_9021   181  AGAACACGCTGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAAGCCGACCCTAGTGAATCTTAATT  270
V  97.2% (240/247)  IGHV3-23*01  227  ...................A................................A..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-10*01  24   ---------------------------------------------------------------------------------------...  26

                                      T------------------>                                  
                                      Y  N  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9021   271  ATAACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  100.0% (6/6)     IGHD3-10*01  27   ...---------------------------------------------------  29
J  100.0% (51/51)   IGHJ2*01     3    ---...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_307612

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGCTTGGCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGGCCAC	ARGYGPLGH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	16	8	0	66.7
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_9022   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCCCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.0% (222/244)  IGHV4-59*01  49   .............................T...T......GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_9022   91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.0% (222/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  G  H  W  G 
                    Query_9022   181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGGCCACTGGGGC  270
V  91.0% (222/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  100.0% (36/36)   IGHJ4*02     13   ----------------------------------------------------------------------------------........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_9022   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  100.0% (36/36)   IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_307610

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         315     5e-88
IGHD4-17*01                                                                                           21.8    0.042
IGHJ3*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGGGGA	ACTTCGGTGACTAC	GGGAGG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATTTGGGGAACTTCGGTGACTACGGGAGGGATGCTTTTGATATA	ARDLGNFGDYGRDAFDI	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	226	25	0	90


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  V  T  S  G  A  Y  C  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_9023     1    ACCCTGTCCCTCACCTGCGCCGTCTCTGGTGGCTCCGTCACGAGTGGTGCTTACTGCTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  90.0% (226/251)  IGHV4-30-4*01  49   ..................A.T...............A...GC.......A.....A..................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  C  S  I  G  G  T  Y  Y  N  S  S  L  K  S  R  I  I  I  S  F  D  T  S 
                    Query_9023     91   CTGGAGTGGATTGGGTACATCTGTTCCATTGGGGGCACCTACTACAATTCGTCCCTCAAGAGTCGAATTATCATTTCATTTGACACGTCC  180
V  90.0% (226/251)  IGHV4-30-4*01  139  ......................A..A..G....A.............CC.................G...C...A...G.A.........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  Q  L  S  S  V  T  A  S  D  T  A  V  Y  Y  C  A  R  D  L  G  N  F  G  D 
                    Query_9023     181  AAGAACCAGTTTTCCCTGCAGTTGAGTTCTGTGACGGCCTCAGACACGGCCGTATATTACTGTGCCAGAGATTTGGGGAACTTCGGTGAC  270
V  90.0% (226/251)  IGHV4-30-4*01  229  ...........C......A..C....C........T...G.............G.................-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD4-17*01    3    -------------------------------------------------------------------------------...A.......  13

                                        MGT-------------------->                                  
                                         Y  G  R  D  A  F  D  I  W  G  Q  G  T  R  I  T  V  S  S  
                    Query_9023     271  TACGGGAGGGATGCTTTTGATATATGGGGCCAAGGGACAAGGATCACCGTCTCTTCAG  328
D  92.9% (13/14)    IGHD4-17*01    14   ...-------------------------------------------------------  16
J  93.9% (46/49)    IGHJ3*02       2    ---------..............C................T.G...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_307611

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           325     3e-91
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGGGAA	AACGAC	TGGGATCGTAGGTGGTCCGGT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGGGAAAACGACTGGGATCGTAGGTGGTCCGGTTTTCACTTC	ASRENDWDRRWSGFHF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9024   1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.0% (225/242)  IGHV4-59*08  49   ....................T......................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       L  I  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S  R  N 
                    Query_9024   91   TTGATTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGTCGACTCACCATCTCAGTAGACACGTCGAGGAAC  180
V  93.0% (225/242)  IGHV4-59*08  139  .G......G...A........A........A.....................A.......G.......A..............C.A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  S  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  N  D  W  D  R  R  W 
                    Query_9024   181  CAGTTCTCCCTGAGCGTGAACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCGAGCCGGGAAAACGACTGGGATCGTAGGTGG  270
V  93.0% (225/242)  IGHV4-59*08  229  .............AGC...G.........C................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD1-1*01   12   ---------------------------------------------------------------------......---------------  17

                                      -------------->                                  
                                       S  G  F  H  F  W  G  P  G  T  L  V  T  V  S  S  
                    Query_9024   271  TCCGGTTTTCACTTCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  319
J  93.0% (40/43)    IGHJ4*02     6    ------...G...A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_307616

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           313     1e-87
IGHD1-26*01                                                                                           12.2    32   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTAGACCA	AGTGGG	GCTGCGGGGGAACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTAGACCAAGTGGGGCTGCGGGGGAACAACTTTGACTAC	ARHVDQVGLRGNNFDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	22	8	0	73.3
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  I  T  L  G  R  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  
                    Query_9025   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCATCACCCTTGGAAGATACTATTGGGGCTGGCTCCGCCAGCCCCCCGGGAAGGGGC  93
V  90.0% (225/250)  IGHV4-39*01  50   .....TCC...A..................G........G.AG.A.T..T.....C.........A.............A..........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  A  S  I  H  Y  S  G  S  P  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_9025   94   TGGAGTGGATTGCGAGTATTCATTACAGTGGGAGCCCCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCCGTAGACACGTCCA  183
V  90.0% (225/250)  IGHV4-39*01  140  ............G......CT....T.........A.....................................A................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  H  F  S  L  R  L  R  S  V  T  A  S  D  T  A  V  Y  Y  C  A  R  H  V  D  Q  V  G  L  
                    Query_9025   184  AGAACCACTTCTCCCTGAGGCTGAGGTCTGTGACCGCCTCAGACACGGCTGTATATTACTGTGCGAGACATGTAGACCAAGTGGGGCTGC  273
V  90.0% (225/250)  IGHV4-39*01  230  .......G..........A......C............G.............G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-26*01  6    -------------------------------------------------------------------------------......-----  11

                                      T------------------>                                  
                                      R  G  N  N  F  D  Y  W  G  Q  G  S  L  A  T  V  S  S  
                    Query_9025   274  GGGGGAACAACTTTGACTACTGGGGCCAGGGAAGTCTGGCCACCGTCTCCTCAG  327
J  93.3% (42/45)    IGHJ4*02     4    ---------........................CC....T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_307617

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           335     4e-94
IGHD2-15*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	ACCCGTTTTGTCT	TGGCGGTAGATGC	ATCTCGGGCTTGAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACCCGTTTTGTCTTGGCGGTAGATGCATCTCGGGCTTGAGTGACTTC	ARDPFCLGGRCISGLSDF	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  P  F  S  G  H  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_9026   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGCCCTTCAGTGGTCACTACTGGAACTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  93.9% (229/244)  IGHV4-34*01  49   .........................A.......T...........T.........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  R  G  G  S  T  T  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_9026   91   TGGATTGGGGAAATCAATCGTGGTGGAAGCACCACCTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCTGTAGACACGTCCAAGAAC  180
V  93.9% (229/244)  IGHV4-34*01  139  ...................A.A............A.................................A..A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  F  C  L  G  G  R  C 
                    Query_9026   181  CAATTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGCGAGACCCGTTTTGTCTTGGCGGTAGATGC  270
V  93.9% (229/244)  IGHV4-34*01  229  ..G...........G....G...........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (11/13)    IGHD2-15*01  13   -----------------------------------------------------------------------------...T.....C...  25

                                      -------------------->                                  
                                       I  S  G  L  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9026   271  ATCTCGGGCTTGAGTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.6% (40/41)    IGHJ4*02     8    --------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_307614

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           335     4e-94
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9027   1    ACCCTATCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.9% (229/244)  IGHV4-39*01  49   .....G.........................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9027   91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCC  180
V  93.9% (229/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C.................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_9027   181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  93.9% (229/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9027   271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_307615

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           277     1e-76
IGHD2-15*01                                                                                           12.2    34   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTC	ATTGTA	T	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTCATTGTATTACGGTATGGACGTC	ARGVADDGWRGGRRVSLYYGMDV	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	211	34	0	86.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  H  C  W  T  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_9028   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTTAGTGGTCACTGCTGGACCTGGATTCGCCAGACACCAGGGAAGGGACTGGAA  90
V  86.1% (211/245)  IGHV4-34*01  49   ......................................C......T...A.....G......C......C.C...........G.....G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  M  N  H  K  G  R  T  T  Y  N  P  S  L  M  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9028   91   TGGATTGGTGAGATGAATCACAAAGGCAGGACGACCTACAACCCGTCGCTAATGAGTCGAGTCACCATCTCAGTGGACACGTCCAAGAAT  180
V  86.1% (211/245)  IGHV4-34*01  139  ........G..A..C.....T.GT..A..C..C.A............C..C.A...............A.....A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  L  S  L  R  L  T  S  L  I  A  A  D  T  A  M  Y  Y  C  A  R  G  V  A  D  D  G  W  R  G 
                    Query_9028   181  CAGCTCTCCCTGAGATTGACCTCTTTAATCGCCGCGGACACGGCTATGTATTACTGTGCGAGAGGCGTGGCGGATGACGGGTGGCGGGGG  270
V  86.1% (211/245)  IGHV4-34*01  229  ...T.........AGC...G....G.G.C................G...................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      3-IMGT----------------------------->                                 
                                       G  R  R  V  S  L  Y  Y  G  M  D  V  W  G  Q  G  V  T  V  T  V  S  S 
                    Query_9028   271  GGCAGACGCGTGTCATTGTATTACGGTATGGACGTCTGGGGCCAGGGAGTCACGGTCACCGTCTCCTCA  339
D  100.0% (6/6)     IGHD2-15*01  6    --------------......-------------------------------------------------  11
J  91.7% (44/48)    IGHJ6*02     15   ---------------------.......................A..GAC...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_64413

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           311     4e-87
IGHD2-21*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGGGGG	ATTGTGATGGT	ATTAACTGCTTCCCCTGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGGATTGTGATGGTATTAACTGCTTCCCCTGGTACTACTATTATGGAATGCACGTC	AKGDCDGINCFPWYYYYGMHV	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	220	21	0	91.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  L  Y  G  G  S  F  S  G  H  Y  W  I  W  L  R  Q  S  P  G  K  G  L  E 
                    Query_9029   1    ACCCTGTCCCTCACCTGCGCTCTCTATGGTGGGTCCTTCAGTGGTCACTACTGGATTTGGCTCCGCCAGTCCCCCGGGAAGGGGCTGGAG  90
V  91.3% (220/241)  IGHV4-34*01  49   .....................G.......................T.........GC...A........C....A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  K  Y  N  S  S  L  K  S  R  V  A  M  S  I  D  E  S  K  S 
                    Query_9029   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACGAAGTACAACTCGTCCCTCAAGAGTCGAGTCGCCATGTCAATAGACGAGTCCAAGAGT  180
V  91.3% (220/241)  IGHV4-34*01  139  ................................C..C......C....................A....A...G.....AC........AC  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  Y  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  G  D  C  D  G  I  N  C  F 
                    Query_9029   181  CAATTCTACCTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAAGGGGGATTGTGATGGTATTAACTGCTTC  270
V  91.3% (220/241)  IGHV4-34*01  229  ..G....C...........G...........................G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (10/11)    IGHD2-21*01  6    -------------------------------------------------------------------......G....------------  16

                                      MGT-------------------------->                                 
                                       P  W  Y  Y  Y  Y  G  M  H  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_9029   271  CCCTGGTACTACTATTATGGAATGCACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  333
J  91.2% (52/57)    IGHJ6*02     6    ------........C..C..T...G...........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_307618

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         283     1e-78
IGHD3-3*01                                                                                            19.9    0.16 
IGHJ4*02                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	CGCGCCAACA	TATTACGATT	ATTTTGTCGCCTCCTTCGTTGACTC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGCGCGCCAACATATTACGATTATTTTGTCGCCTCCTTCGTTGACTCCTATTTTGACTCA	ASAPTYYDYFVASFVDSYFDS	246	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	100	14	0	87.7
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	214	33	0	86.6


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  I  D  S  A  N  Y  F  W  N  W  I  R  Q  P  P  G  K  G  
                    Query_9030     4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATCGACAGTGCTAATTACTTCTGGAATTGGATCCGCCAGCCCCCAGGAAAGGGCC  93
V  86.6% (214/247)  IGHV4-30-4*01  50   .....TCC...A....CA....................AG.....G.G......A.....G.....................G.......  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  Y  I  G  Y  I  Y  R  G  G  R  T  Y  Y  N  P  S  L  K  G  R  V  A  M  S  L  D  T  S  
                    Query_9030     94   TGGAGTATATTGGGTACATCTATCGCGGTGGGCGCACCTACTATAACCCGTCCCTGAAGGGTCGAGTTGCCATGTCATTAGACACGTCCA  183
V  86.6% (214/247)  IGHV4-30-4*01  140  ......GG...............TA.A.....A..........C...........C...A........A....A...G............  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><--------------------------C
                                        K  N  D  F  S  L  T  L  H  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  A  P  T  Y  Y  D  Y  
                    Query_9030     184  AGAACGACTTCTCCCTGACGCTACACTCTGTGACTGCCGCAGACACGGCCGTATATTATTGTGCCAGCGCGCCAACATATTACGATTATT  273
V  86.6% (214/247)  IGHV4-30-4*01  230  .....C.G..........A...GAG...........................G.....C........-----------------------  296
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD3-3*01     2    -----------------------------------------------------------------------------..........---  11

                                        DR3-IMGT-------------------------->                                  
                                        F  V  A  S  F  V  D  S  Y  F  D  S  W  G  R  G  I  L  V  T  V  S  S  
                    Query_9030     274  TTGTCGCCTCCTTCGTTGACTCCTATTTTGACTCATGGGGCCGGGGAATACTGGTCACCGTCTCCTCAG  342
J  87.2% (41/47)    IGHJ4*02       2    ----------------------...C.......AC.......A.....CC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_307619

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           346     2e-97
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTATCGTTCGGGGACTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATCGTTCGGGGACTTATTTTGACTAC	ARGLYYYRSGTYFDY	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  N  W  I  R  Q  H  P  G  K  G  
                    Query_9031   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  94.4% (235/249)  IGHV4-31*03  50   .....TCC...A......................................T.........G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  T  R  I  T  I  S  V  D  T  S  
                    Query_9031   94   TGGAGTGGATTGGGCACATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGACTCGAATTACCATATCAGTAGACACCTCCA  183
V  94.4% (235/249)  IGHV4-31*03  140  ..............T..........C..................................G....G...................G..T.  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  R  S  
                    Query_9031   184  AGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCTATTACTATCGTTCGG  273
V  94.4% (235/249)  IGHV4-31*03  230  .........................C..........................G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (22/24)    IGHD3-10*01  2    --------------------------------------------------------------------------.........G......  17

                                      ---------------->                                  
                                      G  T  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9031   274  GGACTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  91.7% (22/24)    IGHD3-10*01  18   ...G....-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    --------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_28614

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD7-27*01                                                                                           14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCA	AACTGGG	AACTCAATAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGACGTCAAACTGGGAACTCAATATACAACTGGTTCGACCCC	SRRQTGNSIYNWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9032   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (239/243)  IGHV4-59*01  49   .......................................................G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9032   91   TGGATTGGATATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  ........G.................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  R  R  Q  T  G  N  S  I  Y  N 
                    Query_9032   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTTCGAGACGTCAAACTGGGAACTCAATATACAAC  270
V  98.4% (239/243)  IGHV4-59*01  229  .............A...........................................G.....---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD7-27*01  3    --------------------------------------------------------------------.......---------------  9
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------------.....  5

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9032   271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (51/51)   IGHJ5*02     6    ..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_64410

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           260     1e-71
IGHD3-16*01                                                                                           12.2    33   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GATCTCCCATTG	TTATGA	GCGGGGCACGGTTTTCGAGTCGGGCTCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTCCCATTGTTATGAGCGGGGCACGGTTTTCGAGTCGGGCTCCCCTTGACCAC	ARSPIVMSGARFSSRAPLDH	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	93	21	0	81.6
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	206	40	0	83.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  K  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9033   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACCTTCACCAAACATGCCCTGAGTTGGGTCCGACAGGCTCCAGGGAAGGGACTAC  90
V  83.7% (206/246)  IGHV3-23*01  47   ...............................A........T.G..GCT.....A....C........C.................G..GG  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  T  I  S  G  D  G  R  A  T  S  T  L  D  S  V  N  G  R  F  T  I  S  R  D  N  S  
                    Query_9033   91   AGTGGGTCTCAACTATTAGTGGTGATGGTCGTGCCACGTCCACCTTAGACTCCGTGAACGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  83.7% (206/246)  IGHV3-23*01  137  ...........G...........AG....G..AG...A.A.TA.GC............G...............................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      I  N  T  L  F  L  Q  L  T  S  L  R  V  D  D  S  A  L  Y  Y  C  A  R  S  P  I  V  M  S  G  
                    Query_9033   181  TCAACACTTTATTTCTGCAACTGACCAGCCTGAGAGTCGACGACTCGGCCCTCTACTATTGTGCGAGATCTCCCATTGTTATGAGCGGGG  270
V  83.7% (206/246)  IGHV3-23*01  227  AG.....GC.G.A.......A...A...........C...G...A.....G.A..T..C.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-16*01  4    ------------------------------------------------------------------------------......------  9

                                      R3-IMGT------------------------>                                  
                                      A  R  F  S  S  R  A  P  L  D  H  W  G  Q  G  T  L  V  T  V  T  S  
                    Query_9033   271  CACGGTTTTCGAGTCGGGCTCCCCTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCACTTCAG  336
J  92.9% (39/42)    IGHJ4*02     7    ------------------------.....T.............................T.C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_266094

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            311     4e-87
IGHD6-6*01                                                                                            21.8    0.042
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGTCGA	ATACCAGCTCGTCC	ACGAGGAAAGTCGG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGTCGAATACCAGCTCGTCCACGAGGAAAGTCGGACTTTGACTAC	ARSRIPARPRGKSDFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	21	8	0	72.4
CDR1-IMGT	30	56	27	25	2	0	92.6
FR2-IMGT	57	107	51	48	3	0	94.1
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	223	24	0	90.3


Alignments

                                     <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                        S  L  R  L  S  C  G  V  S  G  G  S  I  S  S  D  N  W  W  G  R  V  R  Q  P  P  G  K  G  
                    Query_9034  1    GGTCCCTGAGACTCTCCTGTGGGGTCTCTGGTGGCTCCATCAGCAGTGATAACTGGTGGGGTCGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  90.3% (223/247)  IGHV4-4*02  47   ..A.....TCC...A....C.CT........................AG..........A..T...........................  136
                                        T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                     ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                     L  E  W  I  G  E  I  Y  H  T  G  S  T  S  Y  N  P  S  L  K  S  R  V  P  I  S  V  D  K  A  
                    Query_9034  91   TGGAGTGGATTGGGGAGATCTATCATACTGGGAGCACCAGCTACAACCCGTCCCTCAAGAGTCGGGTCCCCATATCAGTCGACAAGGCCA  180
V  90.3% (223/247)  IGHV4-4*02  137  ................A..........G...........A........................A...A..........A......T...  226
                                     L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                     -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                     K  N  Q  F  S  L  N  L  T  S  V  T  A  A  G  T  A  M  Y  Y  C  A  R  S  R  I  P  A  R  P  
                    Query_9034  181  AGAACCAGTTCTCCCTGAACCTGACGTCTGTGACCGCCGCGGGCACGGCCATGTATTACTGTGCGAGGAGTCGAATACCAGCTCGTCCAC  270
V  90.3% (223/247)  IGHV4-4*02  227  ...................G....GC................A.......G................-----------------------  293
                                     K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD6-6*01  5    --------------------------------------------------------------------------...G..........--  18

                                     GT-------------------->                                  
                                     R  G  K  S  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9034  271  GAGGAAAGTCGGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (45/45)   IGHJ4*02    4    ------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_55106

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           352     3e-99
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCG	TACGGTGGCTAC	ATGAGAC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCGTACGGTGGCTACATGAGACACTTTGACTAC	ARVPYGGYMRHFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9035   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATAACTATGAGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-48*03  47   ..........................................G..GT.....A.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  I  S  Y  I  S  S  S  G  R  T  I  D  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_9035   91   AGTATATTTCATACATTAGTAGTAGTGGTAGAACCATAGACTACGCAGACTCTGTGAGGGGCCGCTTCACCATCTCCAGAGACAACGCCG  180
V  95.2% (237/249)  IGHV3-48*03  137  ...GGG.........................T......T..................A......A........................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  Y  G  G  Y  M  
                    Query_9035   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGTCCCGTACGGTGGCTACATGA  270
V  95.2% (237/249)  IGHV3-48*03  227  .....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD4-17*01  5    --------------------------------------------------------------------------.......A....----  16

                                      ------------->                                  
                                      R  H  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_9035   271  GACACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  97.8% (44/45)    IGHJ4*02     4    ---........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_86330

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           400     9e-114
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TTTCCAAGGCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTCCAAGGCGACTACTCGGACTTC	ARDFQGDYSDF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  T  C  K  A  S  G  Y  P  F  S  T  Y 
                    Query_9036   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCACCTGCAAGGCTTCTGGTTACCCCTTTAGCACCTAC  91
V  94.1% (273/290)  IGHV1-18*04  7    ......................................................T....................A......C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  H  G  L  E  W  L  G  W  I  S  G  H  N  G  N  T  K  N  A  Q 
                    Query_9036   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACACGGGCTTGAGTGGCTGGGATGGATCAGCGGTCACAATGGCAACACAAAAAATGCACAG  181
V  94.1% (273/290)  IGHV1-18*04  97   ................................A............A...............C.T.......T........CT........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  D  R  V  T  M  T  T  D  T  S  T  T  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_9036   182  AAGTTCCAGGACAGAGTCACCATGACCACAGACACATCCACGACCACAGCGTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.1% (273/290)  IGHV1-18*04  187  ...C......G................................G......C.......................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  D  F  Q  G  D  Y  S  D  F  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_9036   272  GTATATTATTGTGCGAGAGATTTCCAAGGCGACTACTCGGACTTCTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  350
V  94.1% (273/290)  IGHV1-18*04  277  ..G.....C...........-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
J  91.7% (44/48)    IGHJ4*02     1    -------------------------------......TT....A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_214174

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            378     3e-107
IGHD1-26*01                                                                                           12.2    35    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y
                    Query_9037   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACCACTTA  90
V  91.7% (266/290)  IGHV1-8*01   6    ..................G...............................................T........C..........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F  A  Q
                    Query_9037   91   TGATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTTGCACA  180
V  91.7% (266/290)  IGHV1-8*01   96   .................................A..G..............A..............C.G...T..........A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D  T  A
                    Query_9037   181  GAGATTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGACACGGC  270
V  91.7% (266/290)  IGHV1-8*01   186  ..AG...C............................C.....A.................GC............G..C..AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_9037   271  CATATATTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  352
V  91.7% (266/290)  IGHV1-8*01   276  .G.G................--------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   -----------------------------...G.....--------------------------------------------  18
J  100.0% (40/40)   IGHJ5*02     11   ------------------------------------------........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_214175

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           380     1e-107
IGHD3-16*01                                                                                           14.1    9.5   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACAAGCGGGCGGCACC	TTTGGGG	CGAGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTAC	ARGQAGGTFGASDY	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	46	5	0	90.2
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	103	11	0	90.4
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	269	26	0	91.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  S  F  N 
                    Query_9038   1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAATGAAGGTCTCCTGCAAGGCTTCCGGTTACAGCTTTAAC  90
V  91.2% (269/295)  IGHV1-18*01  1    ...G.T.............................................G......................T.......C.....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  G  I  T  W  M  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  A  Y  N  G  N  T  K  Y 
                    Query_9038   91   GACTATGGTATCACTTGGATGCGACAGGCCCCTGGACAGGGGCCTGAGTGGATGGGATGGATCAGCGCATATAATGGTAACACAAAGTAT  180
V  91.2% (269/295)  IGHV1-18*01  91   AG...........GC...G...................A....T........................T..C..............C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  E  R  I  Q  G  R  L  I  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_9038   181  TCAGAGAGGATCCAGGGCAGACTCATCATGACCACAGACACATCCACGAGCACAGCCTACATGGAATTGAGGAGCCTGAGATCTGACGAC  270
V  91.2% (269/295)  IGHV1-18*01  181  G..C...A.C...........G...C.......................................GC.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  G  Q  A  G  G  T  F  G  A  S  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_9038   271  ACGGCCGTCTATTATTGTGCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  360
V  91.2% (269/295)  IGHV1-18*01  271  ........G.....C..........-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD3-16*01  15   ------------------------------------------.......-----------------------------------------  21
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------------------....................................  44

                                          
                                       S  
                    Query_9038   361  TCAG  364
J  100.0% (40/40)   IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_214176

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           405     4e-115
IGHD3-3*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GG	TTACGATTTTTGGAGTGGTT	TCAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTTACGATTTTTGGAGTGGTTTCAGACTTTGACTAC	ARVTIFGVVSDFDY	290	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	74	1	0	98.7
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	294	5	5	0	0	100
Total	N/A	N/A	293	276	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T 
                    Query_9039   2    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTACC  91
V  94.2% (276/293)  IGHV1-18*04  1    .....T............................................................................C.......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       Y  H  G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  T  D  G  N  T  H  Y 
                    Query_9039   92   TACCACGGTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTACCGATGGGAACACACACTAT  181
V  94.2% (276/293)  IGHV1-18*04  91   AG.T.........G.......................................................TA.A....T......A.....  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  H  N  V  Q  G  R  V  T  L  T  T  D  S  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_9039   182  GCACACAACGTCCAGGGCAGAGTCACCTTGACCACAGACTCATCCACGAGCACCGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  271
V  94.2% (276/293)  IGHV1-18*04  181  .....G..GC.................A...........A.............A....................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  V  T  I  F  G  V  V  S  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_9039   272  ACGGCCGTGTATTACTGTGCGAGGGTTACGATTTTTGGAGTGGTTTCAGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  361
V  94.2% (276/293)  IGHV1-18*04  271  .......................-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (20/20)   IGHD3-3*01   4    -------------------------....................---------------------------------------------  23
J  100.0% (45/45)   IGHJ4*02     4    -------------------------------------------------.........................................  44

                                          
                                       S  
                    Query_9039   362  TCAG  365
J  100.0% (45/45)   IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_214177

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           353     9e-100
IGHD6-13*01                                                                                           14.1    8.1   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACTGG	GCAGCAG	GTGAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACTGGGCAGCAGGTGACTGACTAC	ARDTGQQVTDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  Y  S  M  N  *  V  R  Q  A  P  G  K  G  L  
                    Query_9040   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTTCCTATAGCATGAACTGAGTCCGCCAGGCTCCAGGGAAGGGTCTGG  90
V  95.2% (238/250)  IGHV3-21*01  47   ....................................C.......AG...............G.......................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  N  S  S  S  F  I  F  H  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_9040   91   AGTGGGTCTCATCCATTAGTAATAGTAGTAGTTTCATATTCCACGCAGACTCAGTGAAGGGCCGATTCACCATATCCAGAGACGACGCCA  180
V  95.2% (238/250)  IGHV3-21*01  137  .....................G...........A.....A.T...............................C.........A......  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      T  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  T  G  Q  Q  V  T  
                    Query_9040   181  CGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATACTGGGCAGCAGGTGACTG  270
V  95.2% (238/250)  IGHV3-21*01  227  A.....................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-13*01  8    ----------------------------------------------------------------------------.......-------  14
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9040   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (41/41)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_214171

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           350     8e-99
IGHD3-10*01                                                                                           23.8    0.011
IGHJ1*01                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TAACGGCG	GGTTCGGGGAGT	N/A	CTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAACGGCGGGTTCGGGGAGTCTGAATACTTCCAGCAC	ARHNGGFGESEYFQH	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	112	2	0	98.2
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_9041   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTTCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  94.8% (237/250)  IGHV4-39*01  50   .....TCC...A....C.............G..C......C...A..A...........G..............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  C  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_9041   94   TGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACTGCCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCA  183
V  94.8% (237/250)  IGHV4-39*01  140  ............................................AA............................................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  N  G  G  F  G  E  
                    Query_9041   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATAACGGCGGGTTCGGGGAGT  273
V  94.8% (237/250)  IGHV4-39*01  230  ......................................................................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD3-10*01  11   ------------------------------------------------------------------------------............  22

                                      ---------------->                                  
                                      S  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9041   274  CTGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (51/51)   IGHJ1*01     2    ...................................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_214172

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD2-21*02                                                                                           10.3    114  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GG	GACTG	ACCCACTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGACTGACCCACTCCTACTTTGAGTCC	ARGLTHSYFES	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  N  N  Y  Y  W  N  W  I  R  H  P  P  G  K  G  L  E 
                    Query_9042   1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAATAATTACTACTGGAACTGGATCCGGCACCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ...........................G............G..G...........G............G.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  R  N 
                    Query_9042   91   TGGATTGGGTACGTCTATTACAGCGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAGGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ...........TA..........T....G........................................................A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  G  L  T  H  S  Y  F  E  S 
                    Query_9042   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCTCTGCGGACACGGCCGTGTATTACTGTGCGAGGGGACTGACCCACTCCTACTTTGAGTCC  270
V  95.5% (231/242)  IGHV4-59*01  229  ..............................G...............................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD2-21*02  17   ----------------------------------------------------------------.....---------------------  21
J  95.7% (45/47)    IGHJ4*02     2    -----------------------------------------------------------------------------.........C.A.  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9042   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  95.7% (45/47)    IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_214173

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           310     1e-86
IGHD5-12*01                                                                                           12.2    30   
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCC	GTGGAT	TAAGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCGTGGATTAAGCTTC	ATRGLSF	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  D  M  N  W  L  R  Q  A  P  G  K  G  P  
                    Query_9043   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACTTTCAGTAATTACGACATGAACTGGCTCCGCCAGGCTCCTGGGAAGGGGCCGG  90
V  90.2% (222/246)  IGHV3-48*03  47   .....................C...............C.......G...T..A.........G.............A..........T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  D  I  T  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_9043   91   AGTGGGTCTCATCCATTAGTAGTCGTGGAGATATCACATACTACGCGGACTCAGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.2% (222/246)  IGHV3-48*03  137  .......T....A..........A....TAG..C..T.........A.....T...A.................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  S  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  T  R  G  L  S  F  W  G  
                    Query_9043   181  AGAACTCACTGTCCCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTCTTTATTACTGTGCGACCCGTGGATTAAGCTTCTGGGGCC  270
V  90.2% (222/246)  IGHV3-48*03  227  ............AT......................C...G.........G...............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD5-12*01  1    ---------------------------------------------------------------------......---------------  6
J  94.3% (33/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  A  Q  V  T  V  S  S  
                    Query_9043   271  AGGGAGCCCAGGTCACCGTCTCCTCAG  297
J  94.3% (33/35)    IGHJ4*02     22   .....A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_243028

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           369     2e-104
IGHD1-1*01                                                                                            18.0    0.64  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCTT	TACAACTGG	GTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCTTTACAACTGGGTTTTTGACTTC	ARGLYNWVFDF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	263	27	0	90.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  D  T  F  T  S  Y
                    Query_9044   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCGGGGTCCTCGGTGAGGGTCTCCTGCAAGGCTTCTGGAGACACCTTCACTAGTTA  90
V  90.7% (263/290)  IGHV1-69*01  6    ..................G.................T.............A.......................G........GC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        S  I  S  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  G  I  I  P  R  F  G  T  K  N  Y  A  Q
                    Query_9044   91   CAGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGAGGCATCATCCCCAGGTTTGGTACAAAGAATTACGCACA  180
V  90.7% (263/290)  IGHV1-69*01  96   TGC...................................T...............G........T.TC.........GCA..C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  G  P  T  S  T  V  Y  M  D  L  S  S  L  T  S  E  D  T  A
                    Query_9044   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGGACCCACGAGCACAGTCTACATGGACCTGAGCAGCCTGACATCTGAGGACACGGC  270
V  90.7% (263/290)  IGHV1-69*01  186  ...................................A.T............C.........G.............G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                 
                                        T  Y  Y  C  A  R  G  L  Y  N  W  V  F  D  F  W  G  Q  G  S  L  V  T  V  S  S 
                    Query_9044   271  CACATATTACTGTGCGAGAGGGCTTTACAACTGGGTTTTTGACTTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCA  349
V  90.7% (263/290)  IGHV1-69*01  276  .GTG................-----------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                             
D  100.0% (9/9)     IGHD1-1*01   3    -------------------------.........---------------------------------------------  11
J  95.2% (40/42)    IGHJ4*02     6    -------------------------------------.......A.............A....................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_174390

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            327     9e-92
IGHD2-21*01                                                                                           10.3    119  
IGHJ6*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	GGTGA	AAAC	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTAGAGAGGGTGAAAACTACTATTTCTATTACGTTATGGACGTC	VREGENYYFYYVMDV	239	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	22	2	0	91.7
FR3-IMGT	125	238	114	111	3	0	97.4
CDR3-IMGT (germline)	239	246	8	5	3	0	62.5
Total	N/A	N/A	233	221	12	0	94.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  P  F  D  D  F  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 
                    Query_9045   14   TGTGCAGCCTCTGGGTTCCCCTTTGATGATTTTGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGAATT  103
V  94.8% (221/233)  IGHV3-9*01   64   ..............A...A............A......................................................T...  153
                                       C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  W  N  S  D  T  I  G  Y  A  D  S  V  K  G  R  V  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_9045   104  AGTTGGAATAGTGATACCATAGGCTATGCGGACTCTGTGAAGGGCCGAGTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTG  193
V  94.8% (221/233)  IGHV3-9*01   154  .............G..G...............................T.........................................  243
                                       S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-----------------CDR3-IMGT----------------->
                                       Q  M  N  N  L  R  P  E  D  T  A  L  Y  Y  C  V  R  E  G  E  N  Y  Y  F  Y  Y  V  M  D  V 
                    Query_9045   194  CAAATGAACAATCTGAGACCTGAGGACACGGCCTTGTATTACTGTGTTAGAGAGGGTGAAAACTACTATTTCTATTACGTTATGGACGTC  283
V  94.8% (221/233)  IGHV3-9*01   244  ..........G.......G...........................CA.A...-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                                        
D  100.0% (5/5)     IGHD2-21*01  14   ------------------------------------------------------.....-------------------------------  18
J  93.3% (56/60)    IGHJ6*02     3    ---------------------------------------------------------------.....C.A...C....G..........  29

                                                                       
                                       W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9045   284  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  316
J  93.3% (56/60)    IGHJ6*02     30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_214178

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           425     3e-121
IGHD2-2*01                                                                                            21.8    0.046 
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCCG	GTAGTACCAGC	GACCTGGAGTT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCCGGTAGTACCAGCGACCTGGAGTTTGGACGTC	ARFPVVPATWSLDV	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	19	5	0	79.2
FR3-IMGT	175	288	114	113	1	0	99.1
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	294	283	11	0	96.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_9046   1    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  90
V  96.3% (283/294)  IGHV1-69*12  1    ...........G...........G..................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  T  I  S  W  V  R  Q  G  P  G  Q  G  L  E  W  M  G  G  I  K  P  S  F  G  T  T  N  Y 
                    Query_9046   91   AGCTATACTATCAGCTGGGTGCGACAGGGCCCTGGACAAGGTCTTGAGTGGATGGGAGGGATCAAGCCTAGCTTTGGAACAACAAACTAC  180
V  96.3% (283/294)  IGHV1-69*12  91   ......G.....................C............G......................TC....T......T...G........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_9046   181  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGTAGCCTGAGATCTGAGGAC  270
V  96.3% (283/294)  IGHV1-69*12  181  .......................................................................C..................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  F  P  V  V  P  A  T  W  S  L  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_9046   271  ACGGCCGTGTATTACTGTGCGAGATTCCCGGTAGTACCAGCGACCTGGAGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  360
V  96.3% (283/294)  IGHV1-69*12  271  ........................------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (11/11)   IGHD2-2*01   12   ------------------------------...........-------------------------------------------------  22
J  100.0% (41/41)   IGHJ6*02     22   ----------------------------------------------------......................................  59

                                         
                                       S 
                    Query_9046   361  TCA  363
J  100.0% (41/41)   IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_164107

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            358     3e-101
IGHD6-19*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGGGAG	GCAGTGGC	CCCGGGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGGGAGGCAGTGGCCCCGGGGAC	ARAPGGSGPGD	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	111	3	0	97.4
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  T  S  N  L  W  T  W  V  R  Q  P  P  E  K  G  L 
                    Query_9047   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGTACTAGTAACTTGTGGACTTGGGTCCGCCAGCCCCCAGAAAAGGGGCTG  90
V  96.4% (238/247)  IGHV4-4*02   49   .........................................C.G........G.....G....................GG.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  K  S  K 
                    Query_9047   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAATAGACAAGTCCAAG  180
V  96.4% (238/247)  IGHV4-4*02   139  ...........................................................................G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  A  P  G  G  S  G  P  G 
                    Query_9047   181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCATCTATTACTGTGCGAGAGCCCCGGGAGGCAGTGGCCCCGGG  270
V  96.4% (238/247)  IGHV4-4*02   229  ................................................G.G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD6-19*01  8    ----------------------------------------------------------------------------........------  15

                                      -->                                  
                                       D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9047   271  GACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (36/36)   IGHJ4*02     13   -....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_130051

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           349     2e-98
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGGAGAAG	ACGATTTTTGGAGTGG	N/A	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGGAGAAGACGATTTTTGGAGTGGTTACTTCTACCTCCACGGGATGCACGTC	ARVGEDDFWSGYFYLHGMHV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  A  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9048   1    GGTCCCTGAGACTCTCCTGTTCAGCGTCTGGATTCACCTTCGCTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-33*01  47   ....................G....................AG...C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  T  T  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9048   91   AGTGGGTGGCAGTTATTTGGTATGATGGAACTACTAAGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCC  180
V  94.8% (236/249)  IGHV3-33*01  137  ................A.............G..A...A...................................................A  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      Q  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  E  D  D  F  W  
                    Query_9048   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGCGAGCCGAAGACACGGCTGTCTATTACTGTGCGAGAGTCGGAGAAGACGATTTTTGGA  270
V  94.8% (236/249)  IGHV3-33*01  227  ........C.......................A.......G...........G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (16/16)   IGHD3-3*01   6    ------------------------------------------------------------------------------............  17

                                      R3-IMGT------------------------>                                 
                                      S  G  Y  F  Y  L  H  G  M  H  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9048   271  GTGGTTACTTCTACCTCCACGGGATGCACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  100.0% (16/16)   IGHD3-3*01   18   ....-------------------------------------------------------------  21
J  90.2% (55/61)    IGHJ6*02     2    ----.....A....TA.T....T...G......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_110164

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     1e-87
IGHD4-17*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TCGCTG	GGTGACTAC	GCAACAACCACCAACCCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATCGCTGGGTGACTACGCAACAACCACCAACCCTCTTTGACCAC	AKDRWVTTQQPPTLFDH	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  L  F  E  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9049   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCCTGTTTGAAAGCTACGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-23*01  47   .....................C.............ACC...AGC.....T.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  F  G  H  S  T  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9049   91   AGTGGGTCTCCGGTATCAGTGGTTTTGGTCATAGCACATACTACGGAGACTCCGTCAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  90.0% (225/250)  IGHV3-23*01  137  ..........A.C...T......AG....GG..............C.........G..................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  G  G  D  T  A  I  Y  Y  C  A  K  D  R  W  V  T  T  Q  
                    Query_9049   181  AGAACACGGTGTATCTGCAAATGAACAGCCTGAGAGGCGGCGACACGGCCATATATTATTGTGCGAAGGATCGCTGGGTGACTACGCAAC  270
V  90.0% (225/250)  IGHV3-23*01  227  ........C...........................C..AG.........G.......C........A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD4-17*01  8    ----------------------------------------------------------------------------.........-----  16

                                      GT-------------------->                                  
                                      Q  P  P  T  L  F  D  H  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_9049   271  AACCACCAACCCTCTTTGACCACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  327
J  95.5% (42/44)    IGHJ4*02     5    -------------.......T..................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_130053

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           316     2e-88
IGHD2-2*01                                                                                            14.1    8.7  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGCTCGTTGTGATAA	TACCATCTGC	CCGAAAAACTTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTCGTTGTGATAATACCATCTGCCCGAAAAACTTGCTGGTTCGACCCC	ARGLVVIIPSARKTCWFDP	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  D  I  S  I  N  T  G  D  Y  Y  W  S  W  F  R  Q  S  P  Q  K  G 
                    Query_9050   1    ACCCTGTCCCTCACCTGCACTGTCTCTGATATCTCCATCAACACCGGTGATTACTATTGGAGCTGGTTCCGCCAGTCCCCACAGAAGGGC  90
V  90.7% (225/248)  IGHV4-31*03  49   ............................G.GG........G..GT....G......C.........A........CA....GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  F  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S 
                    Query_9050   91   CTGGAATGGATTGGGTACATCTATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAGGAGTCGAGTTAGCATTTCCATAGACACGTCT  180
V  90.7% (225/248)  IGHV4-31*03  139  .....G..................................A.................A...........C...A..AG...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  V  V  I  I  P 
                    Query_9050   181  AAGAACCAGTTCTCCCTGAAGGTGAACTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGGGGGCTCGTTGTGATAATACCA  270
V  90.7% (225/248)  IGHV4-31*03  229  .....................C...G...........................G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.0% (9/10)     IGHD2-2*01   16   -------------------------------------------------------------------------------------.....  20

                                      3-IMGT----------------------->                                  
                                       S  A  R  K  T  C  W  F  D  P  W  G  P  G  T  L  V  S  V  S  S  
                    Query_9050   271  TCTGCCCGAAAAACTTGCTGGTTCGACCCCTGGGGCCCGGGAACCCTGGTCAGCGTCTCCTCAG  334
D  90.0% (9/10)     IGHD2-2*01   21   G....-----------------------------------------------------------  25
J  95.7% (45/47)    IGHJ5*02     5    -----------------....................A..............C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_130054

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD7-27*01                                                                                           18.0    0.67  
IGHJ3*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCCGCCGCGGCA	AACTGGGGA	T	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCGCCGCGGCAAACTGGGGATTGATGCTTTTCATATC	ARPRRGKLGIDAFHI	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	280	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_9051   4    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTCAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  93
V  95.6% (280/293)  IGHV5-51*03  2    ....G.....G....................G..........................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  F  I  G  W  V  R  Q  T  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  
                    Query_9051   94   GTTACTTCATCGGCTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACA  183
V  95.6% (280/293)  IGHV5-51*03  92   .C....GG...................T.........................................G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_9051   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  95.6% (280/293)  IGHV5-51*03  182  ................................................G.........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      S  G  I  Y  Y  C  A  R  P  R  R  G  K  L  G  I  D  A  F  H  I  W  G  Q  G  T  M  V  T  V  
                    Query_9051   274  GCGGCATATATTATTGTGCGAGACCCCGCCGCGGCAAACTGGGGATTGATGCTTTTCATATCTGGGGCCAAGGGACAATGGTCACCGTCT  363
V  95.6% (280/293)  IGHV5-51*03  272  C..C...G.....C.........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (9/9)     IGHD7-27*01  3    ------------------------------------.........---------------------------------------------  11
J  98.0% (49/50)    IGHJ3*02     1    ----------------------------------------------..........G.................................  44

                                            
                                      S  S  
                    Query_9051   364  CTTCAG  369
J  98.0% (49/50)    IGHJ3*02     45   ......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_110163

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            21.8    0.041
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGACACCTCGAGA	TTTGGAGTGGT	CAA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACACCTCGAGATTTGGAGTGGTCAAGATGCTTTTGTTACC	ARHLEIWSGQDAFVT	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9052   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCATCTTTAGCAACTACGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (228/245)  IGHV3-23*01  47   ....................G...............C........G...T.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  F  G  V  R  G  V  A  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9052   91   AGTGGGTCTCAACTTTTGGTGTTAGAGGTGTTGCCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (228/245)  IGHV3-23*01  137  ...........G..A..A...G...T....G.AG........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  H  L  E  I  W  S  G  
                    Query_9052   181  AGAACACCCTTTATCTGCAAATGCACAGCCTGAGAGCCGAGGACACGGCCGTATATTATTGTGCGCGACACCTCGAGATTTGGAGTGGTC  270
V  93.1% (228/245)  IGHV3-23*01  227  .......G..G............A..................................C......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD3-3*01   12   ------------------------------------------------------------------------------...........-  22

                                      ---------------->                                  
                                      Q  D  A  F  V  T  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9052   271  AAGATGCTTTTGTTACCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  95.9% (47/49)    IGHJ3*02     2    --..........A..T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_130056

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           316     2e-88
IGHD2-15*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CC	GATATTGTGGTGGCGGTGACTGCTACTC	GGGACCGGAG	GACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCGATATTGTGGTGGCGGTGACTGCTACTCGGGACCGGAGGACCAC	ARDRYCGGGDCYSGPEDH	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9053   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGCATATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-21*01  47   ............................................AGC...AG......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  N  T  Y  D  E  F  Y  A  D  S  V  K  G  R  F  T  V  Y  R  D  N  A  
                    Query_9053   91   AGTGGGTCTCCTCCATTAGTAGTAATACTTATGACGAATTCTATGCAGACTCAGTGAAGGGCCGGTTCACCGTCTACAGAGACAACGCCA  180
V  90.4% (226/250)  IGHV3-21*01  137  ..........A.............G..G.AG.T..AT..A...C....................A......A...C..............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  N  S  L  Y  L  Q  M  Y  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  R  Y  C  G  G  G  
                    Query_9053   181  GGAACTCACTGTATCTCCAAATGTACAACCTGAGAGTCGAAGACACGGCTGTGTATTACTGTGCGAGAGACCGATATTGTGGTGGCGGTG  270
V  90.4% (226/250)  IGHV3-21*01  227  A...............G......A...G........C...G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  85.7% (24/28)    IGHD2-15*01  3    ------------------------------------------------------------------------........A....T...A  20

                                      IMGT--------------------->                                  
                                      D  C  Y  S  G  P  E  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9053   271  ACTGCTACTCGGGACCGGAGGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  85.7% (24/28)    IGHD2-15*01  21   G.........--------------------------------------------------  30
J  97.5% (39/40)    IGHJ4*02     9    --------------------...T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_164100

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_9054   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTA  90
V  97.6% (282/289)  IGHV5-51*03  6    ..............................................................................C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_9054   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  97.6% (282/289)  IGHV5-51*03  96   .......................................................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9054   181  GTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  ........................C....C....A..................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_9054   271  CATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  359
V  97.6% (282/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (15/15)   IGHD6-19*01  4    ----------------------------------...............----------------------------------------  18
J  97.3% (36/37)    IGHJ4*02     12   ----------------------------------------------------........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_130058

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           396     2e-112
IGHD1-26*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	GGG	GGTCTAGTGGAAGGTACTAC	CTCCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTAC	ARGGLVEGTTSFFDY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	70	4	0	94.6
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	294	6	5	1	0	83.3
Total	N/A	N/A	293	273	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  K  F  T  
                    Query_9055   2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAAGTTTACCA  91
V  93.2% (273/293)  IGHV5-51*01  2    ....G.....G.......................A........G.....................................GC.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  F  P  R  D  S  D  T  R  Y  
                    Query_9055   92   GCTATTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTCGTGACTCCGATACCAGATATA  181
V  93.2% (273/293)  IGHV5-51*01  92   ....C......................T...........................G.......A....G.......T...........C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  Q  D  Q  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  D  S  L  K  A  S  D  
                    Query_9055   182  ACCCGTCCTTCCAAGACCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTACCTGCAGTGGGACAGCCTGAAGGCCTCGGACA  271
V  93.2% (273/293)  IGHV5-51*01  182  G..............G.......................A............................AG....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  I  Y  Y  C  A  R  G  G  L  V  E  G  T  T  S  F  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_9055   272  CCGCCATTTATTACTGTGCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  361
V  93.2% (273/293)  IGHV5-51*01  272  .......G............A..-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  85.0% (17/20)    IGHD1-26*01  1    --------------------------...A......G..C......--------------------------------------------  20
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------------------......................................  42

                                            
                                      S  S  
                    Query_9055   362  CGTCAG  367
J  97.7% (43/44)    IGHJ4*02     43   .C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_130059

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     5e-96
IGHD6-13*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCTGG	GCAGCAG	GTGAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGCTGGGCAGCAGGTGACTGACTAT	ARDAGQQVTDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  N  Y  G  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_9056   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTCAGTAACTATGGCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  93.6% (234/250)  IGHV3-21*01  47   ....................................CC.......G....A..............................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  G  S  D  Y  I  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9056   91   AGTGGGTCTCATCCATTAGTAGTGGTAGTGATTACATATACTACGTAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.6% (234/250)  IGHV3-21*01  137  .......................A.....AG..............C............................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      R  N  S  V  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  A  G  Q  Q  V  T  
                    Query_9056   181  GGAACTCGGTGTTTCTACAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTATATTACTGTGCGAGAGATGCTGGGCAGCAGGTGACTG  270
V  93.6% (234/250)  IGHV3-21*01  227  A......AC...A...G...................C...............G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-13*01  8    ----------------------------------------------------------------------------.......-------  14
J  92.7% (38/41)    IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  P  G  T  Q  V  T  V  S  S  
                    Query_9056   271  ACTATTGGGGCCCGGGAACCCAGGTCACCGTCTCCTCAG  309
J  92.7% (38/41)    IGHJ4*02     10   ....C.......A........T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_245109

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            16.1    2.3  
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGGGAGGCGG	TTACGATT	CTATCCTCGGT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGGAGGCGGTTACGATTCTATCCTCGGTCTACGACTACGCTATGGACGTC	ASGEAVTILSSVYDYAMDV	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	232	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  F  Y  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_9057   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  95.9% (232/242)  IGHV4-59*01  49   ...........................................G..A................................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  Y  Y  S  G  R  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_9057   91   TGGATTGGGTCTATTTATTACAGTGGGAGGACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCGTATCAGTTGACACGTCCAAGAAC  180
V  95.9% (232/242)  IGHV4-59*01  139  ..........A...C..............C....................................A.......A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  G  E  A  V  T  I  L  S  S 
                    Query_9057   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGCGGGGAGGCGGTTACGATTCTATCCTCG  270
V  95.9% (232/242)  IGHV4-59*01  229  ...................G.................................C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (8/8)     IGHD3-3*01   4    -------------------------------------------------------------------------........---------  11

                                      ----------------------->                                 
                                       V  Y  D  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9057   271  GTCTACGACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  327
J  96.4% (53/55)    IGHJ6*02     8    --....T......G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_245108

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9058  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01  49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_9058  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01  139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_9058  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01  229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01  13   ----------------------------------------------------------------------.....C..G...--------  24

                                     ----------->                                  
                                      G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_9058  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02    6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_110168

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            318     5e-89
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GGG	GTGGCTGG	ACATCT	GACCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGGGAGGGGGTGGCTGGACATCTGACCCC	TGGGGWTSDP	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  D  N  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9059   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCATCTTTGATAACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-7*01   47   ...............................A....C....AG..G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  E  H  Y  V  D  S  L  K  G  R  F  T  I  S  R  D  D  A  
                    Query_9059   91   AGTGGGTGGCCAACATAAAGCAGGATGGAAGTGAAGAACACTATGTGGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACGACGCCA  180
V  90.8% (226/249)  IGHV3-7*01   137  ......................A...........GA..T.............TG.............................A......  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  N  G  L  R  I  E  D  T  A  V  Y  Y  C  T  G  G  G  G  W  T  S  D  
                    Query_9059   181  AGAACACACTGTATCTACAAATGAATGGCCTGAGAATCGAGGACACGGCTGTATATTATTGTACGGGAGGGGGTGGCTGGACATCTGACC  270
V  90.8% (226/249)  IGHV3-7*01   227  .....T..........G........CA........GC...............G.....C...G..A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  11   ------------------------------------------------------------------------........----------  18
J  100.0% (36/36)   IGHJ5*02     12   --------------------------------------------------------------------------------------....  15

                                      ->                              
                                      P  W  G  Q  G  T  L  V  T  V  S 
                    Query_9059   271  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCC  302
J  100.0% (36/36)   IGHJ5*02     16   ................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_110169

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD1-26*01                                                                                           18.0    0.70  
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCGAGACGTCCCCTTAC	AGTGGGAACTAC	AACAAAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCGAGACGTCCCCTTACAGTGGGAACTACAACAAAGTACTACCACTACGGTATAGACGTC	ARHPRRPLTVGTTTKYYHYGIDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  S  Y
                    Query_9060   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCCGGATACAGCTTTATTAGTTA  90
V  94.5% (275/291)  IGHV5-51*01  6    ....................................C................................T.............CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_9060   91   TTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCCGGTGACTCGGATACCAGATACAACCC  180
V  94.5% (275/291)  IGHV5-51*01  96   C........C.....................................................T........T.............G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  M  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  S  A
                    Query_9060   181  GTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACATGTCCATCAGCACCGCCTACCTCCAGTGGAGCAGCCTGAAGGCCTCGGACAGCGC  270
V  94.5% (275/291)  IGHV5-51*01  186  .......C...................A.C.....A.....................G............................C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        M  Y  Y  C  A  R  H  P  R  R  P  L  T  V  G  T  T  T  K  Y  Y  H  Y  G  I  D  V  W  G  L
                    Query_9060   271  CATGTATTACTGTGCGAGACATCCGAGACGTCCCCTTACAGTGGGAACTACAACAAAGTACTACCACTACGGTATAGACGTCTGGGGCCT  360
V  94.5% (275/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD1-26*01  6    ---------------------------------------.......G....---------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------------------......T..........G.............A  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_9060   361  AGGGACCACGGTCACCGTCTCCTCA  385
J  94.7% (54/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_17403

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD3-16*01                                                                                           12.2    35    
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTTGAGG	GATTAC	CAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTAC	ARSLRDYQPFYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_9061   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  98.3% (284/289)  IGHV5-51*03  6    .............................................................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_9061   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  V  S  A  D  K  A  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9061   181  GTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAAGGCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACTGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ......................A..............T.................................................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  S  L  R  D  Y  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_9061   271  CATGTATTACTGTGCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  359
V  98.3% (284/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  8    ----------------------------......-------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ------------------------------------------....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_59217

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            332     3e-93
IGHD1-26*01                                                                                           10.3    121  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTGCCAT	GGAGC	AATGGACCCAATC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTGCCATGGAGCAATGGACCCAATCCTACTTTGACGCC	ARSAMEQWTQSYFDA	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9062   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAGTAGTTATTGGATGACCTGGGTCCGCCAGGCTCCAGGTAAGGGGCTGG  90
V  92.7% (230/248)  IGHV3-7*01   47   .....................C........................C..........G.....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  V  E  Y  Y  V  D  S  V  R  G  R  F  T  M  S  R  D  N  A  
                    Query_9062   91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGTGGAATACTACGTGGACTCTGTGAGGGGCCGATTCACCATGTCCAGAGACAACGCCA  180
V  92.7% (230/248)  IGHV3-7*01   137  ....................C............A.A.......T.............A...............C................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  S  V  S  L  Q  M  S  S  L  T  A  E  D  T  A  V  Y  Y  C  A  R  S  A  M  E  Q  W  T  
                    Query_9062   181  GGAACTCAGTCTCTCTGCAAATGAGCAGCCTGACAGCCGAGGACACGGCTGTATACTACTGTGCGAGATCTGCCATGGAGCAATGGACCC  270
V  92.7% (230/248)  IGHV3-7*01   227  A.......C.G.A...........A........G..................G..T............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  10   ----------------------------------------------------------------------------.....---------  14

                                      ---------------->                                
                                      Q  S  Y  F  D  A  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9062   271  AATCCTACTTTGACGCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
J  95.6% (43/45)    IGHJ4*02     2    ----..........TA.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_225385

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           291     5e-81
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ5*01                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GATGTCTTATCGAGATGATTA	TGGTTATTATTAC	ATG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGATGTCTTATCGAGATGATTATGGTTATTATTACATGGACTCT	AKEMSYRDDYGYYYMDS	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  G  M  Y  W  V  R  Q  G  P  G  K  G  L  
                    Query_9063   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAATTATGGCATGTACTGGGTCCGCCAGGGTCCAGGCAAGGGGCTGG  90
V  87.2% (218/250)  IGHV3-30*18  47   ........................................C..T.GC.........C...............C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  L  A  H  D  G  F  G  E  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9063   91   AGTGGGTGGCAGTTCTCGCACATGATGGATTTGGTGAGCACTATGCAGACTCCGTGAAGGGCCGATTCACCATTTCCAGAGACAATTCGA  180
V  87.2% (218/250)  IGHV3-30*18  137  ..............A.AT..T........AG.AA.A.AT..................................C..............C.  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  S  T  L  Y  L  Q  L  N  N  L  R  P  E  D  S  G  L  Y  Y  C  A  K  E  M  S  Y  R  D  D  
                    Query_9063   181  GGAGCACTCTGTATTTGCAATTGAACAACTTGAGACCTGAGGACTCGGGTCTCTATTATTGTGCGAAAGAGATGTCTTATCGAGATGATT  270
V  87.2% (218/250)  IGHV3-30*18  227  A..A...G......C.....A......G.C.....G........A...C.G.G.....C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      GT-------------------->                                  
                                      Y  G  Y  Y  Y  M  D  S  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_9063   271  ATGGTTATTATTACATGGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  327
D  92.3% (12/13)    IGHD3-22*01  19   -.........C...-------------------------------------------  31
J  92.5% (37/40)    IGHJ5*01     12   -----------------.....C........A.....................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_92620

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           339     2e-95
IGHD6-13*01                                                                                           19.9    0.17 
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGGGTTGG	AGCAGCTGGT	GCCCTAAGGGGGCCGGGAAT	ATTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGTTGGAGCAGCTGGTGCCCTAAGGGGGCCGGGAATATTGCTACTACTATTTTAGTATGGACGCC	AKGLEQLVP*GGREYCYYYFSMDA	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  R  N  Y  G  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_9064   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACCTTTAGAAATTATGGCATGTACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-23*01  47   ................................T..........C.GC....C....AG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  V  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  I  T  I  S  R  D  N  S  
                    Query_9064   91   AGTGGGTCTCAGGTGTTAGTGGTAGTGGTGGTAGTACATACTACGCAGACTCCGTGAAGGGCCGGATCACCATTTCCAGAGACAACTCCA  180
V  93.9% (232/247)  IGHV3-23*01  137  ............C.A...................C..............................T.......C...........T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  S  A  E  D  T  A  V  Y  Y  R  A  K  G  L  E  Q  L  V  P  
                    Query_9064   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGCGCCGAGGACACGGCCGTATATTACCGTGCGAAGGGGTTGGAGCAGCTGGTGCCCT  270
V  93.9% (232/247)  IGHV3-23*01  227  ..................................A........................T.......-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD6-13*01  10   ---------------------------------------------------------------------------..........-----  19

                                      ----CDR3-IMGT------------------------------>                                 
                                      *  G  G  R  E  Y  C  Y  Y  Y  F  S  M  D  A  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9064   271  AAGGGGGCCGGGAATATTGCTACTACTATTTTAGTATGGACGCCTGGGGCCAAGGGACCACGGTTACCGTCTCCTCA  347
J  88.7% (55/62)    IGHJ6*02     1    ---------------...A.........C.ACG.........T.....................C............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_264080

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           335     4e-94
IGHD3-16*02                                                                                           21.8    0.045
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGC	TTTGGGGGATTTGTCGT	CATTAGTAGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCTTTGGGGGATTTGTCGTCATTAGTAGGCTTTGACTTC	ARALGDLSSLVGFDF	281	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	67	56	50	6	0	89.3
CDR1-IMGT	68	91	24	18	6	0	75
FR2-IMGT	92	142	51	47	4	0	92.2
CDR2-IMGT	143	166	24	21	3	0	87.5
FR3-IMGT	167	280	114	103	11	0	90.4
CDR3-IMGT (germline)	281	285	5	5	0	0	100
Total	N/A	N/A	274	244	30	0	89.1


Alignments

                                      <-----------------------FR1-IMGT-----------------------><-------CDR1-IMGT------><---------
                                         C  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  D  F  S  N  Y  W  I  G  W  
                    Query_9065   12   CTTGTGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAAATCTCCTGTAAGGTGTCGGGATACGACTTTAGTAATTACTGGATTGGCTGGG  101
V  89.1% (244/274)  IGHV5-51*03  20   ..G.A................................G.............GT..T......AG.....CC.GC........C.......  109
                                         G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W  I  G  W  

                                      -----------FR2-IMGT---------------------><-------CDR2-IMGT------><------------------------
                                      V  R  Q  M  P  G  K  G  L  A  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  S  P  S  F  Q  G  
                    Query_9065   102  TGCGCCAGATGCCCGGGAAAGGCCTGGCTTGGATGGGGATTATCTTTCCTGATGACTCTGACACCAGATACAGTCCGTCATTCCAAGGCC  191
V  89.1% (244/274)  IGHV5-51*03  110  ...........................AG...........C....A.....G.........T...........C.....C..........  199
                                      V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S  F  Q  G  

                                      ----------------------------FR3-IMGT----------------------------------------------------><
                                      P  V  T  M  S  V  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  I  Y  F  C  
                    Query_9065   192  CGGTCACCATGTCAGTCGACAAGTCCATTAATACCGCCTACCTCCAGTGGAGCAGCCTGAAGGCCTCGGACACCGCCATATATTTCTGTG  281
V  89.1% (244/274)  IGHV5-51*03  200  A.........C....C............C.GC...........G...................................G....A.....  289
                                      Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M  Y  Y  C  

                                      -----------------CDR3-IMGT----------------->                                  
                                      A  R  A  L  G  D  L  S  S  L  V  G  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9065   282  CGAGGGCTTTGGGGGATTTGTCGTCATTAGTAGGCTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  89.1% (244/274)  IGHV5-51*03  290  ....--------------------------------------------------------------------------  293
                                      A                                                                             
D  88.2% (15/17)    IGHD3-16*02  15   -------.........G..A....------------------------------------------------------  31
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_174399

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATTTGCTGA	TTCGGGGA	TTGAAAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGTC	AKFADSGIETYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	276	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  S  F
                    Query_9066   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTATCAGCTT  90
V  96.2% (276/287)  IGHV5-51*01  6    ...................................................................................C.....A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  C  L  G  I  I  D  P  R  D  S  D  T  T  Y  S  P
                    Query_9066   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGCTTGGGGATCATCGATCCTCGTGACTCTGATACCACATACAGCCC  180
V  96.2% (276/287)  IGHV5-51*01  96   ........G....................................GA...........T.....G...............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  T  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9066   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (276/287)  IGHV5-51*01  186  .............................C...........T................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  K  F  A  D  S  G  I  E  T  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_9066   271  CATGTATTATTGTGCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTC  360
V  96.2% (276/287)  IGHV5-51*01  276  .........C.......-------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                           
D  100.0% (8/8)     IGHD3-10*01  13   ---------------------------........-------------------------------------------------------  20
J  98.0% (48/49)    IGHJ6*02     14   ------------------------------------------.............................................C..  61

                                       
                                       
                    Query_9066   361  A  361
J  98.0% (48/49)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_337941

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            311     4e-87
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCTCTCCTAGAAGTGACTGGGCGAGGG	GGGGGAGT	N/A	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCTCTCCTAGAAGTGACTGGGCGAGGGGGGGGAGTTGGTTCGACCCC	AASPRSDWARGGSWFDP	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	100	14	0	87.7
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  G  I  T  Y  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9067   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCGGCATTACTTACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.9% (221/243)  IGHV4-4*02   49   .......................................A...G..G.A.........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  A  Y  Y  S  G  S  N  N  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  K  S  K 
                    Query_9067   91   GAGTGGATTGGGGAAGCCTATTATAGTGGGAGCAACAACTACAACCCGTCCCTCAAAAGTCGAGTCGCCATATCAGTGGACAAGTCCAAG  180
V  90.9% (221/243)  IGHV4-4*02   139  ...............AT....C............C.....................G.........A..........A............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  E  F  S  L  G  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  A  S  P  R  S  D  W  A  R 
                    Query_9067   181  AACGAGTTTTCCCTGGGGTTAACGTCTATGACCGCCGCGGACACGGCCGTATATTATTGTGCGGCCTCTCCTAGAAGTGACTGGGCGAGG  270
V  90.9% (221/243)  IGHV4-4*02   229  ...C....C......AA.C.G.GC...G......................G.....C......---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            

                                      -------------------->                                  
                                       G  G  S  W  F  D  P  W  G  Q  G  I  L  V  I  V  S  S  
                    Query_9067   271  GGGGGGAGTTGGTTCGACCCCTGGGGCCAGGGAATCCTGGTCATCGTCTCCTCAG  325
D  100.0% (8/8)     IGHD3-16*01  18   -........----------------------------------------------  25
J  95.7% (44/46)    IGHJ5*02     6    ---------.........................C........C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_114399

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           333     1e-93
IGHD3-22*01                                                                                           23.8    0.011
IGHJ2*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CC	ATGATAGTAGTG	ACGACCACAATGGGTAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCATGATAGTAGTGACGACCACAATGGGTATTACTTCGAGATC	ARDHDSSDDHNGYYFEI	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	232	19	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  G  G  Y  F  W  N  W  I  R  Q  R  P  G  K  G 
                    Query_9068   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCGGTGGTGGTTACTTCTGGAACTGGATCCGCCAGCGCCCAGGGAAGGGC  90
V  92.4% (232/251)  IGHV4-31*03  49   ..........................................A............A.....G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  A  S  T  Q  Y  N  P  S  P  K  G  R  V  T  I  S  A  D  T  S 
                    Query_9068   91   CTAGAGTGGATTGGGAACATCTTTTACAGTGCGAGCACCCAGTACAACCCGTCCCCCAAGGGTCGAGTTACCATATCAGCAGACACGTCT  180
V  92.4% (232/251)  IGHV4-31*03  139  ..G............T......A........G.......T.C.............T....A..................T..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  N  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  D  H  D  S  S  D  D 
                    Query_9068   181  AAGAATCAGTTCTCCCTGAAACTGAACTCCATGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGACCATGATAGTAGTGACGAC  270
V  92.4% (232/251)  IGHV4-31*03  229  .....C..............G....G...TG......................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD3-22*01  9    -------------------------------------------------------------------------............-----  20

                                      MGT-------------------->                                  
                                       H  N  G  Y  Y  F  E  I  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9068   271  CACAATGGGTATTACTTCGAGATCTGGGGCCGTGGCACCCTGGTCACCGTCTCCTCAG  328
J  93.5% (43/46)    IGHJ2*01     8    ------------........TC.........................T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_114398

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     3e-93
IGHD3-10*01                                                                                           14.1    8.3  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATGG	GGTTCGAGGA	CACTCGACCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTTCGAGGACACTCGACCGTTTTTGATATC	ARDGVRGHSTVFDI	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	227	15	0	93.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  S  N  S  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_9069   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAATAGTAACTCTTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.8% (227/242)  IGHV4-59*08  50   .....TCC...A...........................G....T...AC........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N  
                    Query_9069   94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTATAATCCCTCCCTTAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAACC  183
V  93.8% (227/242)  IGHV4-59*08  140  .....................................C..C........C.....................G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  V  R  G  H  S  T  V  
                    Query_9069   184  AGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGATGGGGTTCGAGGACACTCGACCGTTT  273
V  93.8% (227/242)  IGHV4-59*08  230  ...................C........C.......................C.........----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  90.0% (9/10)     IGHD3-10*01  11   -------------------------------------------------------------------......G...-------------  20
J  93.2% (41/44)    IGHJ3*02     7    ----------------------------------------------------------------------------------------..  8

                                      ------->                                  
                                      F  D  I  W  G  Q  G  T  T  I  I  V  S  S  
                    Query_9069   274  TTGATATCTGGGGCCAAGGGACAACGATCATCGTCTCTTCAG  315
J  93.2% (41/44)    IGHJ3*02     9    ........................T.G...C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_114395

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           422     2e-120
IGHD3-16*01                                                                                           12.2    37    
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGA	AATTGGTAACACCTAATTGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTC	ARRGKLVTPNWDYGMDV	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	72	3	0	96
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	294	282	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_9070   2    CAGGTCCAGCTTGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  91
V  95.9% (282/294)  IGHV1-18*04  1    .....T.....G.............C................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  C  Y  N  G  N  T  K  Y 
                    Query_9070   92   AACTACGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGTTGTTACAATGGTAACACAAAGTAT  181
V  95.9% (282/294)  IGHV1-18*04  91   .G...............................................................CGC..................C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  L  K  H  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_9070   182  GCACTGAAGCACCAGGGCAGAGTCACCATGACCACAGACACATCGACGAGCACAGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGAC  271
V  95.9% (282/294)  IGHV1-18*04  181  ....A.....T.................................C..............C..............................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><--------------------CDR3-IMGT-------------------->                     
                                       T  A  V  Y  Y  C  A  R  R  G  K  L  V  T  P  N  W  D  Y  G  M  D  V  W  G  Q  G  T  T  V 
                    Query_9070   272  ACGGCCGTGTATTACTGTGCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTC  361
V  95.9% (282/294)  IGHV1-18*04  271  ........................------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD3-16*01  18   -------------------------......-----------------------------------------------------------  23
J  100.0% (50/50)   IGHJ6*02     13   ----------------------------------------------------......................................  50

                                                  
                                       T  V  S  S 
                    Query_9070   362  ACCGTCTCCTCA  373
J  100.0% (50/50)   IGHJ6*02     51   ............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_142645

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           436     1e-124
IGHD3-22*01                                                                                           23.8    0.012 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACCCCCCCGGG	GTAGTGGTTATT	GACGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAACCCCCCCGGGGTAGTGGTTATTGACGGCTGGTTCGACCCC	ARDNPPGVVVIDGWFDP	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	285	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_9071   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  97.9% (285/291)  IGHV1-69*01  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  K  Y  A  Q
                    Query_9071   91   TGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGAACAGCAAAGTACGCACA  180
V  97.9% (285/291)  IGHV1-69*01  96   ..C.....................................................................T........C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  T  A  D  E  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_9071   181  GAAGTTCCAGGACAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  97.9% (285/291)  IGHV1-69*01  186  ...........G......................................C.......................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  D  N  P  P  G  V  V  V  I  D  G  W  F  D  P  W  G  Q  G  T  L  V  T  V
                    Query_9071   271  CGTTTATTACTGTGCGAGAGATAACCCCCCCGGGGTAGTGGTTATTGACGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGT  360
V  97.9% (285/291)  IGHV1-69*01  276  ...G.................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD3-22*01  15   ----------------------------------............--------------------------------------------  26
J  97.9% (46/47)    IGHJ5*02     5    ---------------------------------------------------.......................................  43

                                              
                                        S  A  
                    Query_9071   361  CTCCGCAG  368
J  97.9% (46/47)    IGHJ5*02     44   ....T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_114397

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.043
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9072   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9072   91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_9072   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9072   271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGTACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  95.3% (41/43)    IGHJ4*02     6    -----------------------....................A.....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_114396

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     2e-90
IGHD3-3*01                                                                                            29.5    2e-04
IGHJ2*01                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGTGGGGTTCAGAGCGA	ATTACGATTTTTGGA	ATCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGTGGGGTTCAGAGCGAATTACGATTTTTGGAATCCCTACTGGTACTTCGATTTC	ARGVGFRANYDFWNPYWYFDF	240	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_9073   4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTATTACTGGAGCTGGATTCGTCAGCCCCCAGGGAAGGGACTGGAGT  93
V  92.2% (225/244)  IGHV4-34*01  50   .....TCC...A..................................C..............C..C.................G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  A  I  K  Y  S  G  N  T  N  H  N  P  S  L  K  S  R  V  T  L  S  V  D  T  S  K  N  
                    Query_9073   94   GGATTGGGGCAATTAAGTACAGCGGAAACACCAACCACAATCCGTCCCTCAAGAGTCGAGTCACCCTATCAGTGGACACGTCCAAGAACC  183
V  92.2% (225/244)  IGHV4-34*01  140  .........A...C..TC.T..T....G.......T....C........................A.......A................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------------CDR3-IM
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  F  R  A  N  Y  D  
                    Query_9073   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCGTGGGGTTCAGAGCGAATTACGATT  273
V  92.2% (225/244)  IGHV4-34*01  230  ................................................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  100.0% (15/15)   IGHD3-3*01   3    ---------------------------------------------------------------------------------.........  11

                                      GT-------------------------->                                  
                                      F  W  N  P  Y  W  Y  F  D  F  W  G  R  G  T  L  V  I  V  S  S  
                    Query_9073   274  TTTGGAATCCCTACTGGTACTTCGATTTCTGGGGCCGTGGTACCCTGGTCATTGTCTCCTCAG  336
D  100.0% (15/15)   IGHD3-3*01   12   ......---------------------------------------------------------  17
J  94.3% (50/53)    IGHJ2*01     1    ----------................C.............C..........C...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_114391

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           367     6e-104
IGHD6-13*01                                                                                           16.1    2.3   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGA	GGGTATAG	GAAGGTTG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGAGGGTATAGGAAGGTTGACGGTATGGACGTC	AREGGYRKVDGMDV	263	304	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	49	44	42	2	0	95.5
CDR1-IMGT	50	73	24	22	2	0	91.7
FR2-IMGT	74	124	51	49	2	0	96.1
CDR2-IMGT	125	148	24	21	3	0	87.5
FR3-IMGT	149	262	114	108	6	0	94.7
CDR3-IMGT (germline)	263	270	8	8	0	0	100
Total	N/A	N/A	265	250	15	0	94.3


Alignments

                                      <-----------------FR1-IMGT-----------------><-------CDR1-IMGT------><--------------------F
                                         V  Q  S  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  F  E  M  T  W  V  R  Q  A  
                    Query_9074   6    TGGTGCAGTCTGGAGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGATTTGAAATGACCTGGGTCCGCCAGGCTC  95
V  94.3% (250/265)  IGHV3-48*03  32   ....A...C....................................................T.A........A.................  121
                                         V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  

                                      R2-IMGT---------------------><-------CDR2-IMGT------><------------------------------------
                                      P  G  K  G  L  E  W  V  S  Y  I  S  S  S  G  R  T  R  H  Y  A  D  S  V  K  G  R  F  T  I  
                    Query_9074   96   CAGGGAAGGGCCTGGAGTGGGTTTCATACATTAGTAGTAGTGGCAGAACCAGACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCT  185
V  94.3% (250/265)  IGHV3-48*03  122  ..........G................................T..T....T.T....................................  211
                                      P  G  K  G  L  E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  

                                      ----------------FR3-IMGT----------------------------------------------------><------------
                                      S  R  D  N  A  K  N  S  L  D  L  Q  M  S  S  L  R  V  E  D  T  G  V  Y  Y  C  A  R  E  G  
                    Query_9074   186  CCAGAGACAACGCCAAGAACTCACTGGATCTGCAAATGAGCAGCCTGAGAGTCGAGGACACGGGTGTTTATTACTGCGCGAGAGAGGGAG  275
V  94.3% (250/265)  IGHV3-48*03  212  ..........................T............A...........C...........C............T........-----  296
                                      S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R        
D  100.0% (8/8)     IGHD6-13*01  1    -----------------------------------------------------------------------------------------.  1

                                      ----CDR3-IMGT--------------->                                 
                                      G  Y  R  K  V  D  G  M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_9074   276  GGTATAGGAAGGTTGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  337
D  100.0% (8/8)     IGHD6-13*01  2    .......-------------------------------------------------------  8
J  97.9% (46/47)    IGHJ6*02     16   ---------------....................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_114390

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           360     1e-101
IGHD3-3*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	237	7	0	97.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_9075   4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  97.1% (237/244)  IGHV4-34*01  50   .....TCC...A....................................A.........................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N  
                    Query_9075   94   GGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAACC  183
V  97.1% (237/244)  IGHV4-34*01  140  ........................................................................T.................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V  
                    Query_9075   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCG  273
V  97.1% (237/244)  IGHV4-34*01  230  ..............................................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  100.0% (7/7)     IGHD3-3*01   9    --------------------------------------------------------------------------------.......---  15

                                      ------------->                                  
                                      A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9075   274  CCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (43/43)   IGHJ4*02     6    -----...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_230641

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           311     4e-87
IGHD3-10*01                                                                                           16.1    2.1  
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	TCGGAGA	TCGGGGAG	N/A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCATCGGAGATCGGGGAGGATGCTTTTGATATC	ASEIGEDAFDI	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	22	24	3	3	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	123	24	21	3	0	87.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	219	209	10	0	95.4


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  V  T  L  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  N  S  D 
                    Query_9076   22   TCTGGAGTCACCCTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGCATTAACAGTGAT  111
V  95.4% (209/219)  IGHV3-74*01  73   ......T.....T................................................................T.....T......  162
                                       S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  N  S  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  S  R  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N 
                    Query_9076   112  GGGAGTAGAATAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTGTATCTTCAAATGAAC  201
V  95.4% (209/219)  IGHV3-74*01  163  ........C.C..G..................................................................G.........  252
                                       G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><-----------CDR3-IMGT----------->                     
                                       S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  E  I  G  E  D  A  F  D  I  W  G  Q  G  T  M  V 
                    Query_9076   202  AGTCTGAGAGTCGAAGACACGGCTGTGTATTACTGTGCATCGGAGATCGGGGAGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTC  291
V  95.4% (209/219)  IGHV3-74*01  253  ..........C...G........................---------------------------------------------------  291
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                    
D  100.0% (8/8)     IGHD3-10*01  14   ----------------------------------------------........------------------------------------  21
J  98.0% (48/49)    IGHJ3*02     2    ------------------------------------------------------....................................  37

                                                   
                                       T  V  S  S  
                    Query_9076   292  ACCGTCTCATCAG  304
J  98.0% (48/49)    IGHJ3*02     38   ........T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_142643

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           392     2e-111
IGHD4-17*01                                                                                           14.1    8.3   
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCACA	GACTACG	AGGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCACAGACTACGAGGGGTACTTTGACTAC	ARHGTDYEGYFDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	251	0	0	100


Alignments

                                       <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                        T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                     Query_9077   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  100.0% (251/251)  IGHV4-39*01  49   ..........................................................................................  138
                                        T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                       -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                        L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                     Query_9077   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  100.0% (251/251)  IGHV4-39*01  139  ..........................................................................................  228
                                        L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                       --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  G  T  D  Y  E  G 
                     Query_9077   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATGGCACAGACTACGAGGGG  270
V  100.0% (251/251)  IGHV4-39*01  229  .......................................................................-------------------  299
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)      IGHD4-17*01  2    ------------------------------------------------------------------------------.......-----  8

                                       ----------->                                  
                                        Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_9077   271  TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (46/46)    IGHJ4*02     3    ..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_448

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           399     3e-113
IGHD7-27*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGTCCTTTTA	CTAACTGGGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGTCCTTTTACTAACTGGGGTTGACTTT	AVLLLTGVDF	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	270	15	0	94.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  N  Y
                    Query_9078   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACAGCTTTACCAACTA  90
V  94.7% (270/285)  IGHV5-51*03  6    .............................................................A........................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  G  W  V  R  Q  R  P  G  E  G  L  E  W  M  G  L  I  Y  P  G  D  S  D  T  R  Y  N  S
                    Query_9078   91   CTTCATCGGCTGGGTGCGCCAGAGGCCCGGGGAAGGCCTGGAGTGGATGGGGCTCATTTATCCTGGTGACTCTGATACCAGGTACAACTC  180
V  94.7% (270/285)  IGHV5-51*03  96   ..GG...................T.......A....................A....C.......................A....G.C.  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9078   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.7% (270/285)  IGHV5-51*03  186  ...............G............................G..........C..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        I  Y  Y  C  A  V  L  L  L  T  G  V  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9078   271  CATTTATTACTGTGCAGTCCTTTTACTAACTGGGGTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  347
V  94.7% (270/285)  IGHV5-51*03  276  ...G...........--------------------------------------------------------------  290
                                        M  Y  Y  C  A                                                              
D  100.0% (10/10)   IGHD7-27*01  1    -------------------------..........------------------------------------------  10
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_449

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     1e-124
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	112	2	0	98.2
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	286	7	0	97.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  
                    Query_9079   2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCA  91
V  97.6% (286/293)  IGHV5-51*01  2    ....G.....G......................................................................G...T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_9079   92   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACA  181
V  97.6% (286/293)  IGHV5-51*01  92   G...................................................................................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_9079   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  97.6% (286/293)  IGHV5-51*01  182  .................................C........................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_9079   272  CCGCCATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  361
V  97.6% (286/293)  IGHV5-51*01  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (17/17)   IGHD5-18*01  2    -------------------------------.................------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_9079   362  CCTCAG  367
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_229498

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD1-26*01                                                                                           18.0    0.60 
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAACAGTTTGTTGGCACCTG	AGTGGGAGC	CTGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACAGTTTGTTGGCACCTGAGTGGGAGCCTGATGATGCTTTTGATATC	ARVNSLLAPEWEPDDAFDI	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  R  S  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9080   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGCAGAAGCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.5% (231/247)  IGHV4-4*02   49   ...............................G............T..T.A........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  R  G  G  N  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  K  S  K 
                    Query_9080   91   GAGTGGATTGGGGAGATCTATCGTGGTGGGAATACCAACTACAACCCGTCCCTCAAGAGTCGACTTACTATATCAGTAGACAAGTCCAAG  180
V  93.5% (231/247)  IGHV4-4*02   139  ..............A.......A.A......GC..............................G.C..C.....................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       N  Q  F  S  L  Q  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  S  L  L  A  P  E 
                    Query_9080   181  AACCAATTCTCCCTGCAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGAGAGTTAACAGTTTGTTGGCACCTGAG  270
V  93.5% (231/247)  IGHV4-4*02   229  .....G.........A.......C..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD1-26*01  6    ----------------------------------------------------------------------------------------..  7

                                      MGT----------------------->                                  
                                       W  E  P  D  D  A  F  D  I  W  G  Q  G  T  L  A  I  V  S  S  
                    Query_9080   271  TGGGAGCCTGATGATGCTTTTGATATCTGGGGCCAAGGGACATTGGCCATCGTCTCTTCAG  331
D  100.0% (9/9)     IGHD1-26*01  8    .......------------------------------------------------------  14
J  94.0% (47/50)    IGHJ3*02     1    -----------...............................A...T..C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_246296

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     6e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_9081   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_9081   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_9081   181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_9081   271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_229493

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           272     2e-75
IGHD2-21*02                                                                                           23.8    0.010
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGGAACTGGA	GGTGGTGACTGC	CTT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGGAACTGGAGGTGGTGACTGCCTTGACCTC	ARAGTGGGDCLDL	230	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	47	4	0	92.2
CDR2-IMGT	92	115	24	20	4	0	83.3
FR3-IMGT	116	229	114	100	14	0	87.7
CDR3-IMGT (germline)	230	236	7	7	0	0	100
Total	N/A	N/A	224	199	25	0	88.8


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  S  F  S  G  F  G  M  H  W  V  R  Q  A  P  G  R  G  L  E  W  V  A  L  I  R  F  D
                    Query_9082   13   GTCTGGATTCAGCTTCAGTGGCTTTGGCATGCATTGGGTCCGCCAGGCTCCAGGCAGGGGCCTGGAGTGGGTGGCACTTATACGGTTTGA  102
V  88.8% (199/224)  IGHV3-33*01  72   ...........C.......A...A.........C......................A...G...............G.....T...A...  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  T  N  Y  A  A  F  A  K  S  R  F  I  I  S  R  D  N  S  K  N  T  M  D  L  Q  M  N
                    Query_9082   103  TGGGAGTAATACAAATTATGCAGCCTTCGCGAAGAGTCGATTCATCATCTCCAGAGACAATTCCAAGAACACGATGGATCTGCAGATGAA  192
V  88.8% (199/224)  IGHV3-33*01  162  ...A.......A.T.C.......A..C..T....G.C.......C............................C..T.......A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------CDR3-IMGT-------------->              
                                        S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  A  G  T  G  G  G  D  C  L  D  L  W  G  Q  G  T
                    Query_9082   193  CAGTCTGAGAGTCGAGGATACGGCTGTGTATTACTGTGCGAGAGCCGGAACTGGAGGTGGTGACTGCCTTGACCTCTGGGGCCAGGGAAC  282
V  88.8% (199/224)  IGHV3-33*01  252  ...C.......C......C.........................----------------------------------------------  295
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (12/12)   IGHD2-21*02  11   -------------------------------------------------------............-----------------------  22
J  95.0% (38/40)    IGHJ5*02     12   ----------------------------------------------------------------------....C...............  31

                                                          
                                        R  V  T  V  S  S  
                    Query_9082   283  CCGGGTCACCGTCTCCTCAG  302
J  95.0% (38/40)    IGHJ5*02     32   ..T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_229492

Length=418
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-24*01                                                                                           425     3e-121
IGHD2-2*02                                                                                            27.6    0.001 
IGHJ6*02                                                                                              85.3    9e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-24*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAACA	TCTACCCCGGACACTGG	AGTACTACCAGGTGCTATAC	ACGACC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACATCTACCCCGGACACTGGAGTACTACCAGGTGCTATACACGACCACTACTACCACAGTATGGACGTC	ATSTPDTGVLPGAIHDHYYHSMDV	290	361	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	72	3	0	96
CDR1-IMGT	77	100	24	24	0	0	100
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	294	283	11	0	96.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  E  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T 
                    Query_9083   2    CAGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGGAGAAGCCTGGGGCCTCGGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACT  91
V  96.3% (283/294)  IGHV1-24*01  1    .......................G.........A................A.......................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       E  L  S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  V  Y 
                    Query_9083   92   GAATTATCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAGGATGGTGAAACAGTTTAT  181
V  96.3% (283/294)  IGHV1-24*01  91   .......................................................................A............A.C..C  180
                                       E  L  S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  I  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  E  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  G  D 
                    Query_9083   182  GCCCAGAAGTTCCAGGGCAGAGTCACCATGACCGAGGACACATCTACAGACACAGCCTATATGGAGCTGAGCAGCCTGAGATCTGGGGAC  271
V  96.3% (283/294)  IGHV1-24*01  181  ..A........................................................C.........................A....  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  E  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------------------CDR3-IMGT------------------------------>
                                       T  A  V  Y  Y  C  A  T  S  T  P  D  T  G  V  L  P  G  A  I  H  D  H  Y  Y  H  S  M  D  V 
                    Query_9083   272  ACGGCCGTCTATTACTGTGCAACATCTACCCCGGACACTGGAGTACTACCAGGTGCTATACACGACCACTACTACCACAGTATGGACGTC  361
V  96.3% (283/294)  IGHV1-24*01  271  ........G...............------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  T                                                                   
D  90.0% (18/20)    IGHD2-2*02   11   -----------------------------------------....G......C........-----------------------------  30
J  92.9% (52/56)    IGHJ6*02     7    -------------------------------------------------------------------........T..G...........  29

                                                                       
                                       W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9083   362  TGGGGCCAGGGAACCACGGTCACCGTCTCCTCA  394
J  92.9% (52/56)    IGHJ6*02     30   ........A..G.....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41024880


Query= Query_442

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            419     2e-119
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	N/A	AGTACCAGCTGCT	CCCGGCACT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGAGTACCAGCTGCTCCCGGCACTTACTACTACTATGGTATGGACGTC	ARGVPAAPGTYYYYGMDV	291	344	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	298	8	7	1	0	87.5
Total	N/A	N/A	296	282	14	0	95.3


Alignments

                                     <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S 
                    Query_9084  3    CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATACACCTTCAGC  92
V  95.3% (282/296)  IGHV1-8*01  1    .....G.....G...........................................................T................C.  90
                                      Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                     GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                      N  Y  D  I  N  W  V  R  Q  T  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 
                    Query_9084  93   AATTATGATATCAACTGGGTGCGGCAGACCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTAT  182
V  95.3% (282/296)  IGHV1-8*01  91   .G.....................A...G..............................................................  180
                                      S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                     -----------------------------------------------FR3-IMGT-----------------------------------
                                      A  Q  K  F  K  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  D  L  S  S  L  R  S  E  D 
                    Query_9084  183  GCACAAAAGTTTAAGGGCAGAGTCACCATGACCAGGGACACCTCCATAAGCACAGCCTACATGGACCTGAGCAGCCTGAGATCTGAGGAC  272
V  95.3% (282/296)  IGHV1-8*01  181  .....G.....CC.......................A............................G........................  270
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                     -----------------><----------------------CDR3-IMGT--------------------->                  
                                      T  A  V  Y  Y  C  A  R  G  V  P  A  A  P  G  T  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T 
                    Query_9084  273  ACGGCCGTCTATTACTGTGCGCGAGGAGTACCAGCTGCTCCCGGCACTTACTACTACTATGGTATGGACGTCTGGGGCCAAGGGACCACG  362
V  95.3% (282/296)  IGHV1-8*01  271  ........G............A....----------------------------------------------------------------  296
                                      T  A  V  Y  Y  C  A  R  G                                                                
D  100.0% (13/13)   IGHD2-2*01  14   --------------------------.............---------------------------------------------------  26
J  96.5% (55/57)    IGHJ6*02    6    ------------------------------------------------...........C..............................  47

                                                    
                                      V  A  V  S  S 
                    Query_9084  363  GTCGCCGTCTCCTCA  377
J  96.5% (55/57)    IGHJ6*02    48   ...A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_443

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     2e-95
IGHD3-10*01                                                                                           10.3    118  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_9085   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-21*01  47   ............................................AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  E  Y  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_9085   91   AGTGGGTCTCATCCATTAGTAGTACTAGTGAATACATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  93.6% (233/249)  IGHV3-21*01  137  ........................G....AGT........C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_9085   181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTT  270
V  93.6% (233/249)  IGHV3-21*01  227  ............A......A..............................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9085   271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_444

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           355     3e-100
IGHD3-10*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTATCGTTCGGGGACTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATCGTTCGGGGACTTATTTTGACTAC	ARGLYYYRSGTYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	26	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  N  W  I  R  Q  H  P  G  K  G  
                    Query_9086   2    CCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGCC  91
V  95.6% (238/249)  IGHV4-31*03  50   ..................................................T.........G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  T  R  I  T  I  S  V  D  T  S  
                    Query_9086   92   TGGAGTGGATTGGGCACATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGACTCGAATTACCATATCAGTAGACACCTCCA  181
V  95.6% (238/249)  IGHV4-31*03  140  ..............T..........C..................................G....G...................G..T.  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  R  S  
                    Query_9086   182  AGAACCAGTTCTCCCTGAAGCTGAGGTCTGTAACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCTATTACTATCGTTCGG  271
V  95.6% (238/249)  IGHV4-31*03  230  .........................C.....G....................G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (22/24)    IGHD3-10*01  2    --------------------------------------------------------------------------.........G......  17

                                      ---------------->                                  
                                      G  T  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9086   272  GGACTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  91.7% (22/24)    IGHD3-10*01  18   ...G....-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    --------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_445

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            346     2e-97
IGHD1-26*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	G	AGTGGGA	TGGCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGAGTGGGATGGCTCCCTGACTAC	VGGVGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  I  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9087   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCATTAGTGACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-7*01   47   ....................................C.T.....AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  E  K  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9087   91   AGTGGGTGGCCAACATAGAGAAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-7*01   137  .................A..C.................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  L  Y  Y  C  V  G  G  V  G  W  L  P  D  
                    Query_9087   181  AGAACTCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTCTGTATTACTGTGTGGGAGGAGTGGGATGGCTCCCTGACT  270
V  94.4% (235/249)  IGHV3-7*01   227  ...................A...A............C.............G............C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  6    ----------------------------------------------------------------------.......-------------  12
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9087   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_229494

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD1-26*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCATACGCC	GTGGGAG	GAAGGGATACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATACGCCGTGGGAGGAAGGGATACCCCTTGACTAC	AKDHTPWEEGIPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  L  S  R  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9088   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCATGCTTAGCAGATTTGCCATGAGTTGGGTCCGCCAGGCCCCTGGGAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-23*01  47   ............................T.......CCT.......C.A.........C..............T..A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  D  N  T  Y  Y  A  D  S  L  K  G  Q  F  S  I  S  R  D  S  S  
                    Query_9088   91   AGTGGGTCTCAGGTATCAGCGGAAGTGGTGATAACACATATTATGCAGACTCCTTGAAGGGCCAGTTCTCCATCTCCAGAGACAGTTCCA  180
V  91.2% (228/250)  IGHV3-23*01  137  ............C...T..T..T.......G..G......C..C.........G.........G....A...............A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  H  T  P  W  E  E  
                    Query_9088   181  AGAACACGCTGTATCTGCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCATACGCCGTGGGAGGAAG  270
V  91.2% (228/250)  IGHV3-23*01  227  ......................G...............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD1-26*01  7    -------------------------------------------------------------------------------.......----  13

                                      ---------------->                                  
                                      G  I  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9088   271  GGATACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_81056

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            367     6e-104
IGHD1-1*01                                                                                            10.3    121   
IGHJ6*02                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	CGGGCGGACGA	GGTAC	TCA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATCGGGCGGACGAGGTACTCAACTTCTACGGTATGGACGTC	AKDRADEVLNFYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	251	9	9	0	0	100
Total	N/A	N/A	251	243	8	0	96.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9089  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.8% (243/251)  IGHV3-9*01  47   ..........................................................................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  I  K  W  N  S  G  S  V  R  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9089  91   AGTGGGTCTCAGGTATTAAGTGGAATAGTGGTAGCGTACGCTATGCGGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (243/251)  IGHV3-9*01  137  ..................GT...............A..G.........................A.........................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  C  Y  C  A  K  D  R  A  D  E  V  L  
                    Query_9089  181  AGAACTCCCTGTATCTACAAATGAATAGTCTGAGAGCTGAGGACACGGCCTTGTGTTACTGTGCAAAAGATCGGGCGGACGAGGTACTCA  270
V  96.8% (243/251)  IGHV3-9*01  227  ................G........C............................A................-------------------  297
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (5/5)     IGHD1-1*01  1    ----------------------------------------------------------------------------------.....---  5

                                     T------------------>                                 
                                     N  F  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9089  271  ACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  98.1% (52/53)    IGHJ6*02    10   ...A.................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_335380

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGGGCGGTAT	CTATGATAGTAATTTTTATTAC	GACTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGGGCGGTATCTATGATAGTAATTTTTATTACGACTTT	ARGGGIYDSNFYYDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	220	22	0	90.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  P  G  S  S  I  S  P  Y  Y  W  S  W  I  R  Q  T  P  G  K  E  L  D 
                    Query_9090   1    ACCCTGTCCCTCACCTGCAGTGTCCCTGGTAGTTCCATCAGTCCTTATTACTGGAGCTGGATCCGGCAGACCCCAGGGAAGGAACTGGAT  90
V  90.9% (220/242)  IGHV4-59*01  49   ...................C....T.....G.C.........AG...C.....................C............G......G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  A  L  K  S  R  V  S  L  S  V  D  T  S  K  H 
                    Query_9090   91   TGGATTGGATACATCTACTACACTGGGAGCACCAACTACAATCCCGCCCTCAAGAGTCGAGTCAGCCTATCAGTAGACACGTCCAAGCAC  180
V  90.9% (220/242)  IGHV4-59*01  139  ........G..T.....T....G..................C...T..................C.A....................A..  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  I  Y  D  S  N  F 
                    Query_9090   181  CAGTTCTCCCTGAAGCTGACCTCTATGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGGGGGGGCGGTATCTATGATAGTAATTTT  270
V  90.9% (220/242)  IGHV4-59*01  229  ...................G....G......................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  86.4% (19/22)    IGHD3-22*01  7    --------------------------------------------------------------------------...........G.GG.  22

                                      ----------->                                  
                                       Y  Y  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9090   271  TATTACGACTTTTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  316
D  86.4% (19/22)    IGHD3-22*01  23   ......----------------------------------------  28
J  97.1% (33/34)    IGHJ4*02     15   ------------............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_81054

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           283     1e-78
IGHD4-17*01                                                                                           14.1    8.5  
IGHJ2*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATCTGGAAACAAA	TGACTGCGGT	CCGGGCAGTCAATGC	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATCTGGAAACAAATGACTGCGGTCCGGGCAGTCAATGCCTTCGATCCC	ARIWKQMTAVRAVNAFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	212	31	0	87.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  G  V  S  G  G  S  V  S  N  N  H  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9091   1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGTGGGTCCGTCAGTAACAATCACTGGAGCTGGATCCGCCAGCCCCCCGGGAAGGGGCTGGAG  90
V  87.2% (212/243)  IGHV4-34*01  49   ...................C.....A..........T.....GGTT.CT.........................A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  V  S  D  S  G  T  T  N  F  N  P  S  L  K  D  R  L  T  L  S  V  D  T  S  N  N 
                    Query_9091   91   TGGCTTGGGGAAGTCAGTGATAGTGGAACCACCAACTTCAACCCGTCTCTCAAGGATCGCCTGACTCTATCAGTAGACACGTCCAACAAC  180
V  87.2% (212/243)  IGHV4-34*01  139  ...A........A...A.C.........G........A.........C......AG...AG.C..CA...................G...  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  A  A  A  D  T  A  V  Y  F  C  A  R  I  W  K  Q  M  T  A  V  R 
                    Query_9091   181  CAGTTCTCCCTGAAGTTAAGTTCTGTGGCCGCCGCGGACACGGCTGTATATTTCTGTGCGAGAATCTGGAAACAAATGACTGCGGTCCGG  270
V  87.2% (212/243)  IGHV4-34*01  229  ...............C.G..C......A...................G....A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD4-17*01  1    ----------------------------------------------------------------------------.....A....----  10

                                      -------------------->                                  
                                       A  V  N  A  F  D  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9091   271  GCAGTCAATGCCTTCGATCCCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  325
J  97.7% (43/44)    IGHJ2*01     10   -----------........T...................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_81055

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           335     4e-94
IGHD1-26*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	AC	AGTGGGAGC	ATT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTACAGAACAGTGGGAGCATTACTAC	TTEQWEHYY	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	24	6	0	80
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	235	21	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  N  D  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9092   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACTTTCAGTAACGACTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.8% (235/256)  IGHV3-15*01  47   .......T................C.......................C.........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  I  G  R  I  K  R  T  S  E  G  G  T  V  D  Y  A  A  P  V  T  G  R  F  T  I  S  R  D  
                    Query_9092   91   AGTGGATCGGCCGTATTAAAAGGACAAGTGAAGGTGGGACAGTAGACTACGCTGCACCCGTGACAGGCAGATTCACCATCTCAAGAGATG  180
V  91.8% (235/256)  IGHV3-15*01  137  .....G.T..............C.A..C...T.........AC....................A..........................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  N  S  I  L  Y  L  Q  M  N  S  L  K  I  E  D  T  A  E  Y  Y  C  T  T  E  Q  W  E  H  
                    Query_9092   181  ATTCAAATAGCATTCTGTACCTGCAAATGAACAGCCTGAAAATCGAGGACACAGCCGAGTATTACTGTACTACAGAACAGTGGGAGCATT  270
V  91.8% (235/256)  IGHV3-15*01  227  .......A.A..CG.....T......................C..............T............C.....--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (9/9)     IGHD1-26*01  6    ------------------------------------------------------------------------------.........---  14

                                      ---->                                  
                                      Y  Y  W  G  Q  G  P  R  V  T  V  S  S  
                    Query_9092   271  ACTACTGGGGCCAGGGACCCCGGGTCACCGTCTCCTCAG  309
J  94.9% (37/39)    IGHJ4*02     10   .................A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_81052

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ5*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	CCCCCT	TAGGAGCACCTGGTAC	CTCCCCCGGGAGGGTCT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGACCCCCTTAGGAGCACCTGGTACCTCCCCCGGGAGGGTCTCC	VTPLGAPGTSPGRVS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	235	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9093   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.5% (235/246)  IGHV3-23*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  F  S  G  S  G  G  D  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_9093   91   AGTGGGTCTCACTTTTTAGTGGTAGTGGTGGTGACACATACTATGCAGACTCCGTGAGGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.5% (235/246)  IGHV3-23*01  137  ...........GC.A.................AG.........C.............A................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  C  Y  C  V  T  P  L  G  A  P  G  T  
                    Query_9093   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTGTTACTGTGTGACCCCCTTAGGAGCACCTGGTACCT  270
V  95.5% (235/246)  IGHV3-23*01  227  ....................................................A.A........C..------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  87.5% (14/16)    IGHD6-13*01  6    ------------------------------------------------------------------------...C....G.......--  21

                                      ---------------->                                  
                                      S  P  G  R  V  S  W  G  Q  G  A  L  V  P  V  S  S  
                    Query_9093   271  CCCCCGGGAGGGTCTCCTGGGGCCAGGGGGCCCTGGTCCCCGTCTCCTCAG  321
J  91.7% (33/36)    IGHJ5*02     16   ---------------.............AA........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_81053

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           388     5e-110
IGHD1-26*01                                                                                           23.8    0.012 
IGHJ5*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGTATGCCGTCC	TGGGAGCTACTA	GTC	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTATGCCGTCCTGGGAGCTACTAGTCGGTTCGACCCC	AKYAVLGATSRFDP	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	66	5	0	93
CDR1-IMGT	76	99	24	18	6	0	75
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	292	4	4	0	0	100
Total	N/A	N/A	288	268	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  V  E  V  K  E  P  G  E  S  L  R  I  S  C  R  G  S  G  Y  T  F  I  S  
                    Query_9094   5    TGCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAGAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGCTCTGGGTACACCTTTATTAGTT  94
V  93.1% (268/288)  IGHV5-51*01  5    .....................C..........A..................A...........A...T.....A....G.....CC..C.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  V  L  E  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  N  
                    Query_9094   95   ATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGTCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGAGACCAGATACAACC  184
V  93.1% (268/288)  IGHV5-51*01  95   .C.......G..........................G................A......................T..........G..  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  H  V  T  L  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  S  L  K  A  S  D  T  
                    Query_9094   185  CGTCCTTCCAAGGCCACGTCACCCTCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCACTGGAGCAGCCTGAAGGCCTCGGACACCG  274
V  93.1% (268/288)  IGHV5-51*01  185  ................G......A.....................G...............G............................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                  
                                      A  M  Y  Y  C  A  K  Y  A  V  L  G  A  T  S  R  F  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_9094   275  CCATGTATTACTGTGCGAAGTATGCCGTCCTGGGAGCTACTAGTCGGTTCGACCCCTGGGGCCAGGGAACCCTAGTCATCGTCTCCTCAG  364
V  93.1% (268/288)  IGHV5-51*01  275  ..................------------------------------------------------------------------------  292
                                      A  M  Y  Y  C  A                                                                          
D  100.0% (12/12)   IGHD1-26*01  8    ------------------------------............------------------------------------------------  19
J  95.6% (43/45)    IGHJ5*02     7    ---------------------------------------------............................G....C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_81050

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           358     4e-101
IGHD3-16*01                                                                                           14.1    9.2   
IGHJ5*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	GGGGGA	TTTGGGG	ACTAC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGATTTGGGGACTACTTCGACCCC	ARGGFGDYFDP	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	259	30	0	89.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  V  T  G  H  N  L  S  S  V
                    Query_9095   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGTGAGTCTCTGAAGATCTCCTGTAAGGTCACTGGACACAACTTAAGCAGTGT  90
V  89.6% (259/289)  IGHV5-51*01  6    .......................................G.........................GTT.....T...G...T.C...CTA  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  F  I  Y  L  G  D  S  D  T  K  Y  S  P
                    Query_9095   91   CTGGATCACCTGGGTGCGCCAGATGCCCGGAAAAGGCCTGGAGTGGATTGGATTCATCTATCTTGGAGACTCTGATACCAAATACAGCCC  180
V  89.6% (259/289)  IGHV5-51*01  96   .......GG.....................G.................G..GA.........C...T.............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  N  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9095   181  TTCCTTTCAAGGCCAGGTCACCATGTCAGCCGACAACTCCATCAACACCGCCTACTTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  89.6% (259/289)  IGHV5-51*01  186  G.....C.................C...........G.......G..........C..........C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        M  Y  F  C  A  R  G  G  F  G  D  Y  F  D  P  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_9095   271  CATGTATTTTTGTGCGCGAGGGGGATTTGGGGACTACTTCGACCCCTGGGGCCAGGGAACGCTGGTCTCCGTCTCCTCAG  350
V  89.6% (259/289)  IGHV5-51*01  276  ........AC......A..-------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                              
D  100.0% (7/7)     IGHD3-16*01  15   -------------------------.......------------------------------------------------  21
J  95.3% (41/43)    IGHJ5*02     9    -------------------------------------.......................C......A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_322304

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD1-26*01                                                                                           19.9    0.15 
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCAA	AGTGGGAGCT	CGATAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCAAAGTGGGAGCTCGATATACAACTGGTTCGACCCC	ARRQSGSSIYNWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  S  I  G  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9096   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGGGGCTCCATCGGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  93.0% (226/243)  IGHV4-59*01  49   ...................C.........T.........A...............G.................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  Y  G  G  S  T  E  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  K 
                    Query_9096   91   TGGATTGGCCATATTTATTACGGTGGGAGCACCGAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAACAAG  180
V  93.0% (226/243)  IGHV4-59*01  139  ........GT....C......A...........A.C................................A.................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  Q  S  G  S  S  I  Y  N 
                    Query_9096   181  CAGTTCTCCCTGAACCTGAACTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGACGTCAAAGTGGGAGCTCGATATACAAC  270
V  93.0% (226/243)  IGHV4-59*01  229  ..............G....G...........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD1-26*01  6    ---------------------------------------------------------------------..........-----------  15
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------------.....  5

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9096   271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (51/51)   IGHJ5*02     6    ..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_335389

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           360     1e-101
IGHD3-16*01                                                                                           12.2    32    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAA	GGGGGGGTT	GGCGGGAGCCTTAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAGGGGGGGTTGGCGGGAGCCTTATACTACTTTGACAAC	ARDKGGLAGALYYFDN	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9097   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-33*01  47   ....................................C.....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  Y  G  G  D  N  K  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_9097   91   AGTGGGTGGCACTTATATGGTATGGTGGAGATAATAAATACTATGCAGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (240/250)  IGHV3-33*01  137  ...........G............A....AG.........................A.................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  K  T  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  K  G  G  L  A  G  
                    Query_9097   181  AGAAAACGCTGTATCTGCAAATGGACAGCCTGAGAGTCGAGGACACGGCTGTATATTACTGTGCGAGAGATAAGGGGGGGTTGGCGGGAG  270
V  96.0% (240/250)  IGHV3-33*01  227  ....C..................A............C...............G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD3-16*01  18   -------------------------------------------------------------------------.....A...--------  26

                                      T------------------>                                  
                                      A  L  Y  Y  F  D  N  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_9097   271  CCTTATACTACTTTGACAACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  324
J  95.8% (46/48)    IGHJ4*02     1    ------...........T..................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_335388

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            349     2e-98
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAA	G	AGCAATGGCTGGT	TGTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGAGCAATGGCTGGTTGTATGATGCTTTTTATATC	AKSNGWLYDAFYI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9098   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGACGACTATGCCTTGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  95.1% (235/247)  IGHV3-9*01   47   ...........................................T..T......A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  D  T  I  G  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9098   91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGACACCATAGGCTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.1% (235/247)  IGHV3-9*01   137  ..............................GT.G...........C............................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  S  L  Q  M  N  S  L  I  P  E  D  T  A  L  Y  Y  C  A  K  S  N  G  W  L  Y  D  
                    Query_9098   181  AGAATTCCCTGTCTCTGCAAATGAACAGCCTGATACCTGAGGACACGGCCTTGTATTACTGTGCAAAGAGCAATGGCTGGTTGTATGATG  270
V  95.1% (235/247)  IGHV3-9*01   227  ....C.......A...............T....G.G...............................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  92.3% (12/13)    IGHD6-19*01  7    --------------------------------------------------------------------....G........---------  19
J  98.0% (48/49)    IGHJ3*02     1    -------------------------------------------------------------------------------------.....  5

                                      ---------->                                 
                                      A  F  Y  I  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_9098   271  CTTTTTATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCA  314
J  98.0% (48/49)    IGHJ3*02     6    .....G......................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_81058

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           371     8e-105
IGHD4-17*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GGTCATC	GACTACGGTGACTAC	GTCG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGAGGTCATCGACTACGGTGACTACGTCGACTTCTACTATTACGGAATGGACGTC	ATEVIDYGDYVDFYYYGMDV	290	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	63	7	0	90
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	175	30	25	5	0	83.3
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	297	8	7	1	0	87.5
Total	N/A	N/A	297	267	30	0	89.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  K  P  G  E  S  L  R  V  S  C  A  A  S  G  L  S  F  K  N  A
                    Query_9099   1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGGTTAAGCCTGGAGAGTCCCTCAGAGTCTCCTGTGCAGCCTCTGGACTCAGCTTCAAAAACGC  90
V  89.9% (267/297)  IGHV3-15*01  6    ..........G.......G...........A........G.G......T...C....................T...CT....GT.....  95
                                        Q  L  V  E  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A

                                      ---><--------------------FR2-IMGT---------------------><----------CDR2-IMGT---------><----
                                        W  M  T  W  V  R  Q  S  P  G  K  G  L  E  W  V  G  R  I  R  S  R  T  D  G  G  T  A  D  Y
                    Query_9099   91   CTGGATGACCTGGGTCCGCCAGTCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGCATTAGAAGCAGAACCGATGGTGGGACGGCAGACTA  180
V  89.9% (267/297)  IGHV3-15*01  96   ........G.............G...............................T....A.....A...T...........AA.......  185
                                        W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y

                                      ------------------------------------------------FR3-IMGT----------------------------------
                                        A  A  P  V  K  G  R  F  I  I  S  R  D  E  S  K  T  T  L  Y  L  Q  M  N  S  L  K  T  E  D
                    Query_9099   181  CGCTGCACCCGTGAAAGGCAGATTCATCATCTCAAGAGATGAATCGAAGACCACCCTTTATCTTCAAATGAACAGCCTGAAAACCGAGGA  270
V  89.9% (267/297)  IGHV3-15*01  186  ..........................C...............T..A..A.A...G..G.....G..........................  275
                                        A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D

                                      ------------------><-------------------------CDR3-IMGT------------------------>           
                                        T  A  V  Y  Y  C  A  T  E  V  I  D  Y  G  D  Y  V  D  F  Y  Y  Y  G  M  D  V  W  G  Q  G
                    Query_9099   271  CACAGCCGTCTATTACTGTGCCACAGAGGTCATCGACTACGGTGACTACGTCGACTTCTACTATTACGGAATGGACGTCTGGGGCCAAGG  360
V  89.9% (267/297)  IGHV3-15*01  276  .........G.........A.......---------------------------------------------------------------  302
                                        T  A  V  Y  Y  C  T  T                                                                  
D  100.0% (15/15)   IGHD4-17*01  2    ----------------------------------...............-----------------------------------------  16
J  89.8% (53/59)    IGHJ6*02     4    -----------------------------------------------------...A......C.....T....................  40

                                                            
                                        S  S  V  T  V  S  S 
                    Query_9099   361  GAGTTCGGTCACCGTCTCCTCA  382
J  89.8% (53/59)    IGHJ6*02     41   ..CCA.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_81059

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           308     4e-86
IGHD5-12*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGAACGTAGAAT	TGGCTAC	AATCCTAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGAACGTAGAATTGGCTACAATCCTAATTGACTAC	ARANVELATILIDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	10	1	0	90.9
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	20	4	0	83.3
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	231	214	17	0	92.6


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  Y  Y  G  M  V  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  
                    Query_9100   14   GTGCAGCCTCCGGATTCACCTTCAGTTACTATGGCATGGTCTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCACTTATAT  103
V  92.6% (214/231)  IGHV3-30*03  65   ..........T...............AG..........CA...........................................G......  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  Y  D  G  T  K  I  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_9100   104  CATATGATGGAACCAAAATATTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCAAGAACACGCTGTATCTGG  193
V  92.6% (214/231)  IGHV3-30*03  155  ............GT..T.A..A.............................................T.....................C  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      E  M  N  S  L  R  I  E  D  T  A  V  H  Y  C  A  R  A  N  V  E  L  A  T  I  L  I  D  Y  W  
                    Query_9100   194  AAATGAACAGCCTGAGAATTGAGGACACGGCTGTTCATTACTGTGCGAGAGCGAACGTAGAATTGGCTACAATCCTAATTGACTACTGGG  283
V  92.6% (214/231)  IGHV3-30*03  245  .................GC...............GT...............---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (7/7)     IGHD5-12*01  11   ---------------------------------------------------------------.......--------------------  17
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------------------------------------............  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_9100   284  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (42/42)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_322300

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCATGTCCCC	ATTACT	TCCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCATGTCCCCATTACTTCCATTGACTTC	ARAHVPITSIDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  A  I  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9101   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCGCCATCAGTGGTTATTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   ...................C.............T........A....C.......G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  N  G  N  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  K 
                    Query_9101   91   TGGATTGGCTACATCTATTACAATGGAAACACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCGAAGAAA  180
V  91.4% (223/244)  IGHV4-59*01  139  ........G..T..........G...G.G....A..................................A...G..........C.....C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  K  M  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  V  P  I  T  S  I  D 
                    Query_9101   181  CACTTCTCCCTGAAGATGACCTCCATGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCATGTCCCCATTACTTCCATTGAC  270
V  91.4% (223/244)  IGHV4-59*01  229  ..G............C...G...TG......................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-10*01  3    ---------------------------------------------------------------------------......---------  8
J  92.7% (38/41)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                 
                                       F  W  G  L  G  T  L  V  T  V  S  S 
                    Query_9101   271  TTCTGGGGCCTGGGAACCCTGGTCACCGTCTCGTCA  306
J  92.7% (38/41)    IGHJ4*02     12   .A........A.....................C...  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_254254

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           449     3e-128
IGHD3-3*01                                                                                            41.1    8e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACGCCT	CGATTTTTGGAGTGGTTATTGTAC	GAGAATCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTAC	ARYASIFGVVIVRESFDY	289	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	74	0	0	100
CDR1-IMGT	76	99	24	24	0	0	100
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	114	0	0	100
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	290	3	0	99


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_9102   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  91
V  99.0% (290/293)  IGHV5-51*01  2    ..........................................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_9102   92   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACTAGATACA  181
V  99.0% (290/293)  IGHV5-51*01  92   ........................................C.......................T.................C.......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_9102   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  99.0% (290/293)  IGHV5-51*01  182  ..........................................................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------------CDR3-IMGT--------------------->                   
                                      T  A  M  Y  Y  C  A  R  Y  A  S  I  F  G  V  V  I  V  R  E  S  F  D  Y  W  G  Q  G  T  L  
                    Query_9102   272  CCGCCATGTATTACTGTGCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTACTGGGGCCAGGGAACCCTGG  361
V  99.0% (290/293)  IGHV5-51*01  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  95.8% (23/24)    IGHD3-3*01   7    ------------------------------....................A...------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    --------------------------------------------------------------............................  33

                                                     
                                      V  T  V  S  S  
                    Query_9102   362  TCACCGTCTCCTCAG  376
J  100.0% (43/43)   IGHJ4*02     34   ...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_246458

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43D*01                                                                                          382     4e-108
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43D*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TAAAGAGGGCCGAATTCTCGGA	TATTAGTATGGTTCGAGGAGT	CCCCACTATATCTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATATAAAGAGGGCCGAATTCTCGGATATTAGTATGGTTCGAGGAGTCCCCACTATATCTCACTACTACTATGGTATGGACGTC	AKDIKRAEFSDISMVRGVPTISHYYYGMDV	243	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	252	10	10	0	0	100
Total	N/A	N/A	252	248	4	0	98.4


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9103    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATACACTGGGTCCGTCAAGCTCCGGGGAAGGGTCTGG  90
V  98.4% (248/252)  IGHV3-43D*01  47   .......................................................G..................................  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  S  L  I  S  W  D  G  G  N  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9103    91   AGTGGGTCTCTCTTATTAGTTGGGATGGTGGTAACACACACTATGCAGACTCTGTGAAGGGTCGATTCACCATCTCCAGAGACAACAGCA  180
V  98.4% (248/252)  IGHV3-43D*01  137  .................................G...CT...................................................  226
                                       E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><---------------------------
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  I  K  R  A  E  F  
                    Query_9103    181  AAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACCGCCTTGTATTACTGTGCAAAAGATATAAAGAGGGCCGAATTCT  270
V  98.4% (248/252)  IGHV3-43D*01  227  ........................................................................------------------  298
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                       -------------CDR3-IMGT--------------------------------------->                            
                                       S  D  I  S  M  V  R  G  V  P  T  I  S  H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_9103    271  CGGATATTAGTATGGTTCGAGGAGTCCCCACTATATCTCACTACTACTATGGTATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCT  360
D  90.5% (19/21)    IGHD3-10*01   2    ----.....C.........G.....-----------------------------------------------------------------  22
J  96.4% (54/56)    IGHJ6*02      7    ---------------------------------------..........C....................A...................  57

                                            
                                       S  S 
                    Query_9103    361  CCTCA  365
J  96.4% (54/56)    IGHJ6*02      58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_246459

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           263     1e-72
IGHD2-15*01                                                                                           12.2    32   
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TGGTGG	CGGACGGGGGCTCGATTGGGGTGCGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTGGCGGACGGGGGCTCGATTGGGGTGCGGTGGTTCGACACC	ARLVADGGSIGVRWFDT	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	96	18	0	84.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	206	38	0	84.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  I  R  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  T  L  E 
                    Query_9104   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGCCTCCATTAGAAGTTATTACTGGAGTTGGGTTCGCCAGCCCCCCGGCAAGACACTGGAG  90
V  84.4% (206/244)  IGHV4-59*08  49   ...................C...........G......C..T.....C........C...A.C..G........A..G...GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  F  H  T  G  T  T  N  Y  H  P  S  L  K  S  R  V  T  I  S  S  D  T  S  K  N 
                    Query_9104   91   TGGATTGGCTATTTCTTTCACACCGGGACCACCAATTACCATCCCTCCCTCAAGAGTCGAGTCACCATTTCATCAGACACGTCCAAGAAC  180
V  84.4% (206/244)  IGHV4-59*08  139  ........G...A...A.T...GT....G......C...A.C..........................A...GT................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       I  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  V  A  D  G  G  S  I  G 
                    Query_9104   181  ATCTTCTCATTGACTCTGACGTCTGTGACCGCCGCAGACACGGCCGTCTATTTTTGTGCGAGACTGGTGGCGGACGGGGGCTCGATTGGG  270
V  84.4% (206/244)  IGHV4-59*08  229  CAG.....CC...AG....GC..........................G....AC..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-15*01  13   ----------------------------------------------------------------......--------------------  18

                                      ----------------->                                  
                                       V  R  W  F  D  T  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_9104   271  GTGCGGTGGTTCGACACCTGGGGCCAGGGAACGCTGGTCAGCGTCTCATCAG  322
J  91.3% (42/46)    IGHJ5*02     6    ------.........C................C.......C......C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_246454

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD1-26*01                                                                                           12.2    31   
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARAKGIAVIVDAFDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_9105   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ..................A.....................G............................C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  V  S  V  D  M  S  N  N 
                    Query_9105   91   TGGATTGGATATATCTATTACAGAGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAGACATGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G..............T....G.....A......C.....CC................CA.A..........C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  K  G  I  A  V  I  V  D 
                    Query_9105   181  CGGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGTGCGAGAGCTAAGGGTATCGCTGTTATAGTAGAT  270
V  90.6% (221/244)  IGHV4-59*01  229  .A...........AG.................T.......CG.....G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------------......----  8
J  91.8% (45/49)    IGHJ3*01     2    ---------------------------------------------------------------------------------------...  4

                                      ----------->                                  
                                       A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_9105   271  GCTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  316
J  91.8% (45/49)    IGHJ3*01     5    .........G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_11232

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_9106   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTTCCACTTA  90
V  96.2% (280/291)  IGHV5-51*01  6    ..............................................................................C...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  P
                    Query_9106   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  96.2% (280/291)  IGHV5-51*01  96   C.......G.................................................T.................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9106   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (280/291)  IGHV5-51*01  186  .......C.....................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_9106   271  CATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  96.2% (280/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD1-26*01  4    -----------------------------...G....A.....-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------......TA....................................  49

                                                   
                                        T  V  S  S 
                    Query_9106   361  CACCGTCTCGTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_246456

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9107   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9107   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_9107   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9107   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_246457

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACAGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACAGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9108   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.6% (225/243)  IGHV4-34*01  49   ................................G...T..................G...........................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  L  S  L  D  M  S  K  K 
                    Query_9108   91   TGGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGCGTCTCCTTATCATTAGACATGTCCAAGAAG  180
V  92.6% (225/243)  IGHV4-34*01  139  .............................C..................C..A.......A...A..A.....G......C.........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  V  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y 
                    Query_9108   181  CAGTTCTCCGTGAAGGTGACGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAACAGTAAAGGGGGTTATTACTGTCTAC  270
V  92.6% (225/243)  IGHV4-34*01  229  .........C.....C...GC..........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  20   --------------------------------------------------------------------------..........------  29

                                      -------------------->                                 
                                       Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9108   271  CAGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  100.0% (40/40)   IGHJ6*02     23   --------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_246451

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           388     5e-110
IGHD3-3*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	GGAGAGTCTG	CGATTTCTGGAGTGGTTAT	CCCCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTAC	AREESLRFLEWLSPDY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  L  T  R  Y 
                    Query_9109   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTAAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTGACCAGATAT  91
V  92.8% (269/290)  IGHV1-18*01  7    ...............................................G.................T..............T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  M  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  S  N  I  N  Y  A  Q 
                    Query_9109   92   AGTATGTCTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATAGCAACATAAATTATGCACAG  181
V  92.8% (269/290)  IGHV1-18*01  97   G....CAGC....................................................C.......G.T....C...C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  L  G  R  V  T  M  T  I  D  T  S  A  N  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_9109   182  AAACTCCTGGGCAGAGTCACCATGACCATAGACACATCCGCGAACACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.8% (269/290)  IGHV1-18*01  187  ..G....A....................C..........A...G..............................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                             
                                       V  Y  Y  C  A  R  E  E  S  L  R  F  L  E  W  L  S  P  D  Y  W  G  Q  G  T  L  V  I  V  S
                    Query_9109   272  GTGTATTATTGTGCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTC  360
V  92.8% (269/290)  IGHV1-18*01  277  ........C........A..---------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-3*01   7    ------------------------------......T............----------------------------------------  25
J  97.1% (34/35)    IGHJ4*02     9    ------------------------------------------------------............................C......  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_246452

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  H
                    Query_9110   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATCA  90
V  92.4% (268/290)  IGHV5-51*01  6    ....................C........A.....................G.........A......C.........C.......GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  P
                    Query_9110   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCCC  180
V  92.4% (268/290)  IGHV5-51*01  96   ...................................................G.......A.....G.......G....C.....C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  A
                    Query_9110   181  GTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCGC  270
V  92.4% (268/290)  IGHV5-51*01  186  ...............G........C...................................G.......G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_9110   271  CTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  350
V  92.4% (268/290)  IGHV5-51*01  276  .A.......C.....G....------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    -----------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_246453

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           344     6e-97
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGTCGTC	ATTACGATTTTTGGAGTGGTT	TTGACGCCACGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGTCGTCATTACGATTTTTGGAGTGGTTTTGACGCCACGTACTACTTTGACTTC	ARGRHYDFWSGFDATYYFDF	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  H  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9111   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTCACTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*08  49   .............................................T...A........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  D  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_9111   91   TGGATTGGGTATATCGACTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAGAGC  180
V  95.5% (231/242)  IGHV4-59*08  139  ...............T.T...............A..................................A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       H  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  H  Y  D  F  W  S  G 
                    Query_9111   181  CACTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTTTATTACTGTGCGAGGGGTCGTCATTACGATTTTTGGAGTGGT  270
V  95.5% (231/242)  IGHV4-59*08  229  ..G...........G....G...........................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (21/21)   IGHD3-3*01   3    ----------------------------------------------------------------------....................  22

                                      GT------------------------>                                  
                                       F  D  A  T  Y  Y  F  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9111   271  TTTGACGCCACGTACTACTTTGACTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  331
D  100.0% (21/21)   IGHD3-3*01   23   .------------------------------------------------------------  23
J  95.8% (46/48)    IGHJ4*02     1    -------------............A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_122916

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_9112   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.9% (279/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_9112   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_9112   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  .......C.....................................C...........G......A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W   A  K  G  P  R  
                    Query_9112   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGG-CCAAGGGACCACGGT  359
V  95.9% (279/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  96.5% (55/57)    IGHJ6*02     6    ----------------------------------------------.......A....................G...............  49

                                                   
                                      S  P  S  P   
                    Query_9112   360  CACCGTCTCCTCA  372
J  96.5% (55/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_122917

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           318     6e-89
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD5-12*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TGAACGTGGCTGAG	GTGGCTAC	AACCTTAGGCGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTGAACGTGGCTGAGGTGGCTACAACCTTAGGCGGC	AKVNVAEVATTLGG	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  F  S  I  Y  S  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9113   1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTGGATTCACCTTCAGTATCTACAGTCTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-21*01  47   .....................C..C....................G...T..CA...A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  *  V  S  S  I  N  S  K  S  V  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  D  
                    Query_9113   91   AGTGAGTCTCATCCATTAATAGTAAGAGTGTTCACATATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGACA  180
V  90.8% (226/249)  IGHV3-21*01  137  ....G.............G.....GT...AG.T..........C........A..................................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  F  L  H  M  S  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  V  N  V  A  E  V  A  
                    Query_9113   181  AGAACTCACTGTTTCTGCACATGAGCAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGAAAGTGAACGTGGCTGAGGTGGCTA  270
V  90.8% (226/249)  IGHV3-21*01  227  ............A......A....A.........................G.G.............G..---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD5-12*01  10   -----------------------------------------------------------------------------------.......  16

                                      ------------->                                  
                                      T  T  L  G  G  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_9113   271  CAACCTTAGGCGGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  318
D  100.0% (8/8)     IGHD5-12*01  17   .-----------------------------------------------  17
J  97.1% (34/35)    IGHJ4*02     14   -------------...............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_122914

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           319     2e-89
IGHD3-3*01                                                                                            14.1    8.1  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TGC	GGAGTGG	ACTTATG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGCGGAGTGGACTTATGGACTCC	ARLRSGLMDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	14	7	0	66.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  I  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  N  G 
                    Query_9114   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAACATTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCGGGGAACGGA  90
V  90.8% (227/250)  IGHV4-39*01  49   ...............................G........G..G..G.................................A.....G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  V  S  N  S  G  N  T  Y  Y  N  P  S  L  K  R  R  V  T  V  S  V  D  T  S 
                    Query_9114   91   CTGGAGTGGCTTGGGAGTGTCTCGAACAGTGGTAACACCTACTACAACCCGTCCCTCAAGCGTCGGGTCACCGTATCCGTAGACACGTCC  180
V  90.8% (227/250)  IGHV4-39*01  139  .........A........A...ATT.T.....G.G.........................A....A......A.................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       N  H  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  R  S  G  L  M  D 
                    Query_9114   181  AATCATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTTCTGTGCGAGACTGCGGAGTGGACTTATGGAC  270
V  90.8% (227/250)  IGHV4-39*01  229  ..GA.C.............A......................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   15   -------------------------------------------------------------------------.......----------  21
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9114   271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_122915

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*03                                                                                           299     3e-83
IGHD3-22*01                                                                                           23.8    0.012
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TAGTCCGAAAACCGCTGGGA	TATGACTATGAGAGTAGCGGT	GA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTAGTCCGAAAACCGCTGGGATATGACTATGAGAGTAGCGGTGATGACTAC	AKVVRKPLGYDYESSGDDY	261	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	102	54	50	1	3	92.6
CDR2-IMGT	103	146	39	20	4	15	51.3
FR3-IMGT	147	260	114	106	8	0	93
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	233	16	18	87.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><-------------------FR2-IMGT---------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9115   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTTAGTAACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.3% (233/267)  IGHV3-23*03  47   ....................G......................C.G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -----------><-----------------CDR2-IMGT----------------><---------------------------------
                                      E  W  V  S  G  I  T  S  R  G  G  S  S  G  G  G  G  G  T  Y  Y  A  D  S  V  K  G  R  F  T  
                    Query_9115   91   AGTGGGTCTCAGGCATTACTAGTAGGGGTGGTAGTAGTGGAGGGGGTGGCGGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCA  180
V  87.3% (233/267)  IGHV3-23*03  137  ............---...T.TA...C...........---------------.........T............................  208
                                      E  W  V  S     V  I  Y  S  G  G  S  S                 T  Y  Y  A  D  S  V  K  G  R  F  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  R  D  N  S  K  N  T  L  F  L  L  M  K  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  V  
                    Query_9115   181  TCTCCAGAGACAATTCCAAGAACACACTGTTTCTGCTAATGAAGAGCCTGAGAGTCGAGGACACGGCCGTCTATTACTGTGCGAAAGTAG  270
V  87.3% (233/267)  IGHV3-23*03  209  ..........T..............G....A.....A......C..........C...............A................---  295
                                      I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K     

                                      --------------CDR3-IMGT----------------------->                                
                                      V  R  K  P  L  G  Y  D  Y  E  S  S  G  D  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9115   271  TCCGAAAACCGCTGGGATATGACTATGAGAGTAGCGGTGATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  349
D  85.7% (18/21)    IGHD3-22*01  2    -----------------...T.......T.....T...-----------------------------------------  22
J  100.0% (39/39)   IGHJ4*02     8    ----------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_122912

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	AGTGGC	TACTATGACACTAGTGGT	GACATTCC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGTGGCTACTATGACACTAGTGGTGACATTCCCAACTGGTTCGACCCC	SGYYDTSGDIPNWFDP	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
Total	N/A	N/A	237	225	12	0	94.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  A  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9116   1    ACCCTGTCCCTCACCTGCACTGCCTCTGGTGACTCCATCAGTAGTTATTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.9% (225/237)  IGHV4-59*01  49   ......................T........G...............C..C.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  T  S  I  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_9116   91   TGGATTGGGTATATCTTTTACAGTGGGACCTCCATCTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCCAAGAAC  180
V  94.9% (225/237)  IGHV4-59*01  139  ................A...........G.A...A.....................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  T  Y  Y  C  S  G  Y  Y  D  T  S  G  D  I  P 
                    Query_9116   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCACTTATTACTGTAGTGGCTACTATGACACTAGTGGTGACATTCCC  270
V  94.9% (225/237)  IGHV4-59*01  229  .............................................GTG.........---------------------------------  285
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                                  
D  88.9% (16/18)    IGHD3-22*01  5    ---------------------------------------------------------------........T.G.......---------  22
J  100.0% (50/50)   IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9116   271  AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (50/50)   IGHJ5*02     3    .................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_122913

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCTACGAGGCGAGTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATATCTACGAGGCGAGTCATCAATATAGTGGCTACATGATTAATGACTAT	GKDIYEASHQYSGYMINDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9117   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGATATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-23*01  47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  G  I  S  E  S  G  G  S  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9117   91   ATTGGGTCTCAGGCATTAGTGAAAGTGGTGGTAGCACAAACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  94.8% (237/250)  IGHV3-23*01  137  .G..........CT.......GT...............T...............................................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  I  S  L  R  A  E  D  T  A  V  Y  Y  C  G  K  D  I  Y  E  A  S  H  
                    Query_9117   181  AGAACACCCTGTATCTACAAATGATCAGCCTCAGAGCCGAGGACACGGCCGTATATTACTGTGGGAAAGATATCTACGAGGCGAGTCATC  270
V  94.8% (237/250)  IGHV3-23*01  227  .......G........G.......A......G...............................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_9117   271  AATATAGTGGCTACATGATTAATGACTATTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  95.1% (39/41)    IGHJ4*02     8    ----------------------......C......................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_122911

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           382     3e-108
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTTGTGG	TACTCTGGTTCGGGGAGT	AAAACCCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTTGTGGTACTCTGGTTCGGGGAGTAAAACCCATTTTGACTAC	ARGLWYSGSGSKTHFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_9118   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (247/250)  IGHV4-31*03  49   .............................................................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9118   91   CTGGAGTGGATTGGGTACATTTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (247/250)  IGHV4-31*03  139  ....................C.....................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  W  Y  S  G  S 
                    Query_9118   181  AAGAACCAGTTCTCCCTGAAGCTGCGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGTTTGTGGTACTCTGGTTCG  270
V  98.8% (247/250)  IGHV4-31*03  229  ........................A.............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  5    ------------------------------------------------------------------------------....A.......  16

                                      MGT-------------------->                                  
                                       G  S  K  T  H  F  D  Y  W  G  Q  G  T  L  V  T  V  A  S  
                    Query_9118   271  GGGAGTAAAACCCATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCGCCTCAG  328
D  94.4% (17/18)    IGHD3-10*01  17   ......----------------------------------------------------  22
J  97.7% (42/43)    IGHJ4*02     6    ---------------....................................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_4171

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           283     1e-78
IGHD6-19*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGGGCAAG	ATAGTAGTGGCTGG	GGCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGAAGGGCAAGATAGTAGTGGCTGGGGCTACTACTTTGACACC	VREGQDSSGWGYYFDT	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	216	35	0	86.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  V  N  S  G  F  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_9119   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGGTCCGTCAATAGTGGTTTTTATTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  86.1% (216/251)  IGHV4-61*01  49   ...................C............C.......GC......AG...C..C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  D  W  I  D  N  V  Y  A  T  G  R  T  K  L  K  S  S  L  T  S  R  V  S  M  S  V  D  K  A 
                    Query_9119   91   CTGGACTGGATTGACAATGTCTATGCCACTGGGAGAACCAAATTGAAGTCCTCCCTCACGAGTCGAGTCAGCATGTCCGTAGACAAGGCC  180
V  86.1% (216/251)  IGHV4-61*01  139  .....G.......GGT..A.....TA..G......C.....C.AC..CC.........A...........C...A..A.......C.T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  L  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  V  R  E  G  Q  D  S  S  G 
                    Query_9119   181  AAGAACCTGTTCTCCCTGAAACTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTTTTGTGTGCGAGAAGGGCAAGATAGTAGTGGC  270
V  86.1% (216/251)  IGHV4-61*01  229  .......A............G....G................................AC....C.A....-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD6-19*01  5    -------------------------------------------------------------------------------....C......  15

                                      GT------------------>                                  
                                       W  G  Y  Y  F  D  T  W  G  P  G  T  L  V  T  V  S  S  
                    Query_9119   271  TGGGGCTACTACTTTGACACCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  325
D  92.9% (13/14)    IGHD6-19*01  16   ...----------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*02     1    -------...........TA........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_122918

Length=315
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           346     2e-97
IGHD2-21*02                                                                                           10.3    110  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TC	ACTGC	GTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCACTGCGTTCTAC	VTAFY	243	257	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  F  W  M  H  W  V  R  Q  A  P  G  Q  G  L  
                    Query_9120   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGGCTTCTGGATGCACTGGGTCCGCCAAGCTCCAGGGCAGGGGCTGG  90
V  95.5% (232/243)  IGHV3-74*01  47   ............................................A...A...............................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  G  D  G  S  S  T  A  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  A  
                    Query_9120   91   TCTGGGTCTCACGTATTAATGGTGATGGGAGTAGCACAGCCTACGCGGACTCCGTTAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  95.5% (232/243)  IGHV3-74*01  137  .G..................A.................AG...............G.........T........................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--CDR3-IMGT-->             
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  V  T  A  F  Y  W  G  Q  G  
                    Query_9120   181  AGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGTCGAGGACACGGCTGTCTATTACTGTGTCACTGCGTTCTACTGGGGCCAGGGAA  270
V  95.5% (232/243)  IGHV3-74*01  227  ....................................C...............G..........---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (5/5)     IGHD2-21*02  18   -----------------------------------------------------------------.....--------------------  22
J  97.4% (37/38)    IGHJ4*02     11   -------------------------------------------------------------------------.................  27

                                                           
                                      T  L  V  T  V  S  S  
                    Query_9120   271  CCCTGGTCACCGTCTCTTCAG  291
J  97.4% (37/38)    IGHJ4*02     28   ................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30410208


Query= Query_122919

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           349     2e-98
IGHD5-12*01                                                                                           18.0    0.60 
IGHJ2*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGAAATGTATGAT	TATAGTGGC	ACAATATAT	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGAAATGTATGATTATAGTGGCACAATATATTGGTACTTCGATCTC	ARQEMYDYSGTIYWYFDL	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  S  R  S  Y  P  W  G  W  V  R  Q  P  P  R  K  G 
                    Query_9121   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGCAGTAGGAGCTACCCCTGGGGCTGGGTCCGCCAGCCCCCACGGAAGGGG  90
V  94.4% (237/251)  IGHV4-39*01  49   ......................................C........T..T...TA..........A..............G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  N  S  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  H  T  S 
                    Query_9121   91   CTGGAGTGGATTGGGACTATCTATAATAGTGGGAGGACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTACACACGTCG  180
V  94.4% (237/251)  IGHV4-39*01  139  ................G.......T..........C.............................................G.......C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       N  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  E  M  Y  D  Y  S 
                    Query_9121   181  AACAACCAGTTCTCCCTGCAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACAAGAAATGTATGATTATAGT  270
V  94.4% (237/251)  IGHV4-39*01  229  ..G...............A....................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD5-12*01  6    ------------------------------------------------------------------------------------......  11

                                      -IMGT--------------------->                                  
                                       G  T  I  Y  W  Y  F  D  L  W  G  R  G  S  L  V  T  V  S  S  
                    Query_9121   271  GGCACAATATATTGGTACTTCGATCTCTGGGGCCGTGGCTCCCTGGTCACTGTCTCCTCAG  331
D  100.0% (9/9)     IGHD5-12*01  12   ...----------------------------------------------------------  14
J  98.0% (48/49)    IGHJ2*01     5    ------------...........................A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_279935

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           400     9e-114
IGHD3-3*01                                                                                            33.4    2e-05 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGGGGGGCCTT	CGATTTTTGGAGTGGTT	TCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGGGGGGCCTTCGATTTTTGGAGTGGTTTCCACTTTGACTCC	ARLGGAFDFWSGFHFDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  T  S  G  C  S  F  T  T  H
                    Query_9122   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATGCAGCTTTACCACCCA  90
V  94.1% (273/290)  IGHV5-51*01  6    .............................A..................................GG........A...........G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  M  G  I  I  Y  P  G  V  S  D  T  R  Y  R  P
                    Query_9122   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACATGGGGATCATCTATCCTGGTGTCTCTGATACCAGATACAGACC  180
V  94.1% (273/290)  IGHV5-51*01  96   ........G...................................GG......................A..................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  A
                    Query_9122   181  GTCCTTCCAAGGCCAAGTCACCATCTCAGCCGACAAGTCCGTCAGTACCGCCTACCTGCAGTGGAGGAGCTTGAAGGCCTCGGACACCGC  270
V  94.1% (273/290)  IGHV5-51*01  186  ...............G........................A....C....................C...C...................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  L  G  G  A  F  D  F  W  S  G  F  H  F  D  S  W  G  Q  G  T  L  V  T  V
                    Query_9122   271  CATGTATTATTGTGCGAGACTAGGGGGGGCCTTCGATTTTTGGAGTGGTTTCCACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGT  360
V  94.1% (273/290)  IGHV5-51*01  276  .........C..........----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD3-3*01   7    ---------------------------------.................----------------------------------------  23
J  97.8% (44/45)    IGHJ4*02     4    -----------------------------------------------------.........A...........................  40

                                              
                                        S  S  
                    Query_9122   361  CTCCTCAG  368
J  97.8% (44/45)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_40323

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           329     3e-92
IGHD2-8*01                                                                                            12.2    31   
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TAATGG	CCCGACTGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGGCCCGACTGAACTACGGCATGGACGTC	ARLMARLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  L  T  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_9123   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCCTCACCAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCCGGGAAGGGACTGGAA  90
V  93.0% (227/244)  IGHV4-59*08  49   ..................A............G....A...GT..................A.............A..............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  R  P  N  N  N  P  S  L  R  S  R  V  T  I  S  V  D  A  S  K  N 
                    Query_9123   91   TGGATTGAGTATATCTATTACAGAGGGCGTCCCAACAACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACGCGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*08  139  .......G...............T...A.CA.....T...............A.........................A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  A  R  L  N  Y  G  M 
                    Query_9123   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACTAATGGCCCGACTGAACTACGGCATG  270
V  93.0% (227/244)  IGHV4-59*08  229  ...................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-8*01   13   ----------------------------------------------------------------......--------------------  18
J  94.0% (47/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_9123   271  GACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCGTCA  309
J  94.0% (47/50)    IGHJ6*02     24   .............A.....................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_4173

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           425     3e-121
IGHD3-16*01                                                                                           12.2    37    
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGA	AATTGGTAACACCTAATTGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTC	ARRGKLVTPNWDYGMDV	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	73	2	0	97.3
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	294	283	11	0	96.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_9124   2    CAGGTGCAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  91
V  96.3% (283/294)  IGHV1-18*04  1    .....T...................C................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  C  Y  N  G  N  T  K  Y 
                    Query_9124   92   AACTACGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGTTGTTACAATGGTAACACAAAGTAT  181
V  96.3% (283/294)  IGHV1-18*04  91   .G...............................................................CGC..................C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  L  K  H  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_9124   182  GCACTGAAGCACCAGGGCAGAGTCACCATGACCACAGACACATCGACGAGCACAGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGAC  271
V  96.3% (283/294)  IGHV1-18*04  181  ....A.....T.................................C..............C..............................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><--------------------CDR3-IMGT-------------------->                     
                                       T  A  V  Y  Y  C  A  R  R  G  K  L  V  T  P  N  W  D  Y  G  M  D  V  W  G  Q  G  T  T  V 
                    Query_9124   272  ACGGCCGTGTATTACTGTGCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTC  361
V  96.3% (283/294)  IGHV1-18*04  271  ........................------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD3-16*01  18   -------------------------......-----------------------------------------------------------  23
J  100.0% (50/50)   IGHJ6*02     13   ----------------------------------------------------......................................  50

                                                  
                                       T  V  S  S 
                    Query_9124   362  ACCGTCTCCTCA  373
J  100.0% (50/50)   IGHJ6*02     51   ............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_212214

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           389     1e-110
IGHD4-17*01                                                                                           14.1    8.3   
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCACA	GACTACG	AGGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCACAGACTACGAGGGGTACTTTGACTAC	ARHGTDYEGYFDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	250	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9125   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  99.6% (250/251)  IGHV4-39*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S 
                    Query_9125   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGGGTCGAGTCACCATATCCGTAGACACGTCC  180
V  99.6% (250/251)  IGHV4-39*01  139  ............................................................A.............................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  G  T  D  Y  E  G 
                    Query_9125   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATGGCACAGACTACGAGGGG  270
V  99.6% (250/251)  IGHV4-39*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD4-17*01  2    ------------------------------------------------------------------------------.......-----  8

                                      ----------->                                  
                                       Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9125   271  TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (46/46)   IGHJ4*02     3    ..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_25318

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	AGTGGC	TACTATGACCCTAGTGGT	GACATTCC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGTGGCTACTATGACCCTAGTGGTGACATTCCCAACTGGTTCGACCCC	SGYYDPSGDIPNWFDP	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  R  R  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_9126   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCCGTCGTAATTACTATTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  94.7% (230/243)  IGHV4-61*01  49   ..........................................A..G...G......C.....C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_9126   91   CTGGAGTGGATTGGATATATCTATTACCGTGGGACCACCAACTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCC  180
V  94.7% (230/243)  IGHV4-61*01  139  ..............G............A......G............C..............................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  T  Y  Y  C  S  G  Y  Y  D  P  S  G  D 
                    Query_9126   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCACTTATTACTGTAGTGGCTACTATGACCCTAGTGGTGAC  270
V  94.7% (230/243)  IGHV4-61*01  229  ...................................................GTG.........---------------------------  291
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  83.3% (15/18)    IGHD3-22*01  5    ---------------------------------------------------------------------........TAG.......---  22

                                      GT------------------>                                  
                                       I  P  N  W  F  D  P  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_9126   271  ATTCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  325
J  98.0% (49/50)    IGHJ5*02     2    -----.....................................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_346661

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           420     7e-120
IGHD3-10*01                                                                                           23.8    0.013 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTAGAA	GGTTCGGGGAGT	CACGACTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTAGAAGGTTCGGGGAGTCACGACTCTTACTACTACGCTATGGACGTC	ARDPLEGSGSHDSYYYAMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  R  Y
                    Query_9127   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGGTA  90
V  96.2% (280/291)  IGHV1-46*01  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  I  I  N  P  S  G  G  T  T  K  Y  A  Q
                    Query_9127   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCAATAATCAATCCTAGTGGTGGTACCACAAAATACGCACA  180
V  96.2% (280/291)  IGHV1-46*01  96   ..................................................G.........C.............G.....GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  D  L  T  S  L  R  S  E  D  T  A
                    Query_9127   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGACCTGACCAGCCTGAGATCTGAGGACACGGC  270
V  96.2% (280/291)  IGHV1-46*01  186  ............................................................G....G........................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        I  Y  Y  C  A  R  D  P  L  E  G  S  G  S  H  D  S  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T
                    Query_9127   271  CATCTATTACTGTGCGAGAGATCCTTTAGAAGGTTCGGGGAGTCACGACTCTTACTACTACGCTATGGACGTCTGGGGCCAAGGGACCAC  360
V  96.2% (280/291)  IGHV1-46*01  276  .G.G.................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD3-10*01  11   -------------------------------............-----------------------------------------------  22
J  98.1% (53/54)    IGHJ6*02     9    ----------------------------------------------------..........G...........................  46

                                                      
                                        V  T  V  S  S 
                    Query_9127   361  GGTCACCGTCTCCTCA  376
J  98.1% (53/54)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_115915

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           294     6e-82
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACG	TACGGTGAC	CCTACACTCCCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACGTACGGTGACCCTACACTCCCATACTTTGACTCT	ARTYGDPTLPYFDS	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  M  S  S  G  G  Y  L  W  S  W  I  R  Q  N  P  G  K  G 
                    Query_9128   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCTATGAGCAGTGGCGGCTATCTCTGGAGCTGGATCCGCCAAAACCCAGGGAAGGGC  90
V  87.9% (218/248)  IGHV4-31*03  49   ...............................G...C..C........T..T..CTA..................GC..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  T  S  Y  Y  S  P  S  L  K  R  R  L  T  I  S  V  G  T  S 
                    Query_9128   91   CTGGAGTGGATTGGGAGCATCTATTACAGTGGAACCTCCTACTACAGCCCGTCCCTCAAGAGGCGACTTACAATATCAGTAGGCACTTCT  180
V  87.9% (218/248)  IGHV4-31*03  139  ...............TA...............G.G.A.........A...............T...G....C..........A...G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       E  K  H  F  S  L  K  L  T  S  M  T  A  A  D  T  A  I  Y  F  C  A  R  T  Y  G  D  P  T  L 
                    Query_9128   181  GAGAAGCACTTCTCCCTGAAGCTGACCTCTATGACTGCCGCGGACACGGCCATATATTTTTGTGCGAGGACGTACGGTGACCCTACACTC  270
V  87.9% (218/248)  IGHV4-31*03  229  A....C..G................G....G....................G.G....AC........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (9/9)     IGHD4-17*01  5    ------------------------------------------------------------------------.........---------  13

                                      -------------->                                  
                                       P  Y  F  D  S  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_9128   271  CCATACTTTGACTCTTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  319
J  93.5% (43/46)    IGHJ4*02     3    ---..........AC.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_302191

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           300     8e-84
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGTACCA	N/A	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGTACCAACTGCTACTACCAAATGGACGTC	REWTVVVPTATTKWTS	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	24	25	24	0	1	96
CDR1-IMGT	25	48	24	19	5	0	79.2
FR2-IMGT	49	99	51	47	4	0	92.2
CDR2-IMGT	100	120	21	17	4	0	81
FR3-IMGT	121	234	114	105	9	0	92.1
CDR3-IMGT (germline)	235	241	7	7	0	0	100
Total	N/A	N/A	242	219	22	1	90.5


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        L  S  L  T   A  L  S  L  G  A  P  S  M  M  T  T  G  A  G  S  G  S  P  P  G  R  D  W  S  
                    Query_9129   1    CCTGTCCCTCAC-TGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAGTG  89
V  90.5% (219/242)  IGHV4-59*01  51   ............C..............T..........G.AG.T............................A...A.............  140
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W

                                      ---------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IM
                                      G  L  D  I  S  I  I  E  G  V  L  N  T  T  P  P  S  R  V  G  S  P  Y  Q  *  T  R  P  T  M  
                    Query_9129   90   GGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAATGA  179
V  90.5% (219/242)  IGHV4-59*01  141  .A....G...........C..T.....C..C..C.......................A..........................G..CC.  230
                                        I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q

                                      GT----------------------------------------------------><-------------------CDR3-IMGT------
                                      S  S  P  *  S  *  A  L  *  P  S  R  T  R  P  S  I  I  V  R  E  W  T  V  V  V  P  T  A  T  
                    Query_9129   180  GTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTATTGTGCGAGAGTGGACTGTAGTAGTACCAACTGCTACTA  269
V  90.5% (219/242)  IGHV4-59*01  231  .............................CT..............G.....C..........----------------------------  292
                                        F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                              
D  100.0% (13/13)   IGHD2-2*01   8    -------------------------------------------------------------------.............----------  20
J  89.3% (50/56)    IGHJ6*02     7    --------------------------------------------------------------------------------...A......  16

                                      ------------>                                 
                                      T  K  W  T  S  G  A  *  G  P  R  S  S  S  P   
                    Query_9129   270  CCAAATGGACGTCTGGGGCCTAGGGACCACGGTCATCGTCTCCTCA  315
J  89.3% (50/56)    IGHJ6*02     17   .GGT................A..............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_345829

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           408     4e-116
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGCGGC	GCTACTAC	ACTCCCCCCCACAAAAGG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGCGGCGCTACTACACTCCCCCCCACAAAAGGCGGTATGGACGTC	ARLRGATTLPPTKGGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  R  F  T  N  Y
                    Query_9130   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGGTTCACCAATTA  90
V  95.2% (275/289)  IGHV5-51*03  6    .................................................................G............C..T....GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  F  Y  S  P
                    Query_9130   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCAGATACCTTTTACAGTCC  180
V  95.2% (275/289)  IGHV5-51*03  96   ........................................................................T......AGA.....C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  R  V  T  M  S  V  D  R  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9130   181  GTCCTTCCAAGGCCGGGTCACCATGTCAGTCGACAGGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (275/289)  IGHV5-51*03  186  ..............A.........C....C.....A......................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  L  R  G  A  T  T  L  P  P  T  K  G  G  M  D  V  W  G  Q  G  T  P  V  S
                    Query_9130   271  CATGTATTACTGTGCGAGACTTCGCGGCGCTACTACACTCCCCCCCACAAAAGGCGGTATGGACGTCTGGGGCCAAGGGACCCCGGTCTC  360
V  95.2% (275/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD1-26*01  13   ----------------------------........------------------------------------------------------  20
J  95.7% (44/46)    IGHJ6*02     17   ------------------------------------------------------............................A.....A.  52

                                                
                                        V  S  S 
                    Query_9130   361  CGTCTCCTCA  370
J  95.7% (44/46)    IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_345828

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD7-27*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TAC	ACTGGGG	CCCCATCTGAGGAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATACACTGGGGCCCCATCTGAGGAATTTGACTGC	AKYTGAPSEEFDC	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  Y  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9131   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCTACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-23*01  47   ..........................................G.AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  V  S  R  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_9131   91   AGTGGGTCTCAACTATTAGTGGTAGTGTTAGTAGAACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  95.2% (236/248)  IGHV3-23*01  137  ...........G...............G.G....C....................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  M  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  Y  T  G  A  P  S  E  
                    Query_9131   181  AGAATACGATGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAAATACACTGGGGCCCCATCTGAGG  270
V  95.2% (236/248)  IGHV3-23*01  227  ....C...C.........................................G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD7-27*01  4    -----------------------------------------------------------------------.......------------  10

                                      ---------->                                  
                                      E  F  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9131   271  AATTTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (42/43)    IGHJ4*02     6    --.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_345826

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           307     1e-85
IGHD1-26*01                                                                                           12.2    31   
IGHJ3*01                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCGGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCGGTTATAGTAGATGCTTTTGATTGC	ARAKGIAVIVDAFDC	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	97	17	0	85.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	220	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_9132   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAG  90
V  90.2% (220/244)  IGHV4-59*01  49   ..................A.....................G............................C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  V  S  V  D  M  S  N  N 
                    Query_9132   91   TGGATTGGATATATCTATTACAGCGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAGACATGTCCAACAAC  180
V  90.2% (220/244)  IGHV4-59*01  139  ........G..............T....G.....A......C.....CC................CA.A..........C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  K  G  I  A  V  I  V  D 
                    Query_9132   181  CGGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGCGCGAGAGCTAAGGGTATCGCGGTTATAGTAGAT  270
V  90.2% (220/244)  IGHV4-59*01  229  .A...........AG.................T.......CG.....G........T.......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------------......----  8
J  89.8% (44/49)    IGHJ3*01     2    ---------------------------------------------------------------------------------------...  4

                                      ----------->                                  
                                       A  F  D  C  W  G  P  G  R  M  V  T  V  S  T  
                    Query_9132   271  GCTTTTGATTGCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  316
J  89.8% (44/49)    IGHJ3*01     5    .........GT........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_345825

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	247	223	21	3	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9133   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  87
V  90.3% (223/247)  IGHV4-4*02   49   ..................GC.........T...TCC......A..AG........GG.......................G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  K 
                    Query_9133   88   GAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCAAG  177
V  90.3% (223/247)  IGHV4-4*02   139  .......................T......A................................G.......A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G  W 
                    Query_9133   178  AATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGTGGGTAGCAGTGGCTGG  267
V  90.3% (223/247)  IGHV4-4*02   229  ..CC.GT..........G....GC..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-19*01  6    -----------------------------------------------------------------------------.............  18

                                      -------->                                
                                       L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_9133   268  CTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  308
J  95.0% (38/40)    IGHJ4*02     7    -......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_345824

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            367     6e-104
IGHD6-6*01                                                                                            19.9    0.16  
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-6*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	GGCTATTT	TAGGAGCTCGTCC	TGGGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATGGCTATTTTAGGAGCTCGTCCTGGGGCTGGTTCGACCCC	AKDGYFRSSSWGWFDP	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	251	9	9	0	0	100
Total	N/A	N/A	251	243	8	0	96.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9134  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.8% (243/251)  IGHV3-9*01  47   ..........................................................................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  Y  I  S  W  N  S  G  S  I  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_9134  91   AGTGGGTCTCTTATATTAGTTGGAATAGTGGTAGTATAGACTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  96.8% (243/251)  IGHV3-9*01  137  ..........AGG.....................C....G..............................................G...  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  F  C  A  K  D  G  Y  F  R  S  S  
                    Query_9134  181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGACCTGAGGACACGGCCTTGTATTTCTGTGCAAAAGATGGCTATTTTAGGAGCTCGT  270
V  96.8% (243/251)  IGHV3-9*01  227  ...................................G.....................A.............-------------------  297
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  92.3% (12/13)    IGHD6-6*01  6    -------------------------------------------------------------------------------...C.......  16

                                     T------------------>                                  
                                     S  W  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9134  271  CCTGGGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  92.3% (12/13)    IGHD6-6*01  17   ..----------------------------------------------------  18
J  100.0% (47/47)   IGHJ5*02    5    -------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_345823

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           316     2e-88
IGHD2-15*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	ACCCGTTTTGTCT	TGGCGGTAGATGC	ATCTCGGGCTTGAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACCCGTTTTGTCTTGGCGGTAGATGCATCTCGGGCTTGAGTGACTTC	ARDPFCLGGRCISGLSDF	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  N  G  G  S  L  N  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9135   1    ACCCTGTCCCTCACCTGCGCCGTCAATGGTGGGTCCCTCAATGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAG  90
V  91.4% (223/244)  IGHV4-34*01  49   ....................T...T...........T...G..G.......................................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  Q  S  G  T  T  N  Y  K  P  S  L  K  S  R  V  I  T  S  V  D  T  S  K  N 
                    Query_9135   91   TGGATTGGGGAAATCAATCAAAGTGGCACCACCAACTACAAGCCGTCCCTCAAGAGTCGAGTAATCACATCGGTGGACACGTCCAAGAAT  180
V  91.4% (223/244)  IGHV4-34*01  139  ....................T.....A.G............C....................C.C..T...A..A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  F  C  L  G  G  R  C 
                    Query_9135   181  CAGTTCTCCTTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGCGAGACCCGTTTTGTCTTGGCGGTAGATGC  270
V  91.4% (223/244)  IGHV4-34*01  229  .........C.....C...G...........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (11/13)    IGHD2-15*01  13   -----------------------------------------------------------------------------...T.....C...  25

                                      -------------------->                                  
                                       I  S  G  L  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9135   271  ATCTCGGGCTTGAGTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.6% (40/41)    IGHJ4*02     8    --------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_345821

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGACC	TACGATTTTTGGAG	GGACC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGACCTACGATTTTTGGAGGGACCACTACTACGCTATGGACGTC	ARVTYDFWRDHYYAMDV	246	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	229	18	0	92.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  I  T  T  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_9136   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTCCATCACCACTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  92.7% (229/247)  IGHV4-39*01  50   .....TCC...A....C.............G........G..G...............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  T  V  Y  Y  I  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  
                    Query_9136   94   TGGAATGGATTGGGACTGTCTATTATATTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCCGTGGACACGTCCA  183
V  92.7% (229/247)  IGHV4-39*01  140  ....G..........G.A.........G.............................A.....................A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  Q  F  S  L  R  L  S  S  L  T  A  A  D  T  A  V  Y  H  C  A  R  V  T  Y  D  F  W  R  
                    Query_9136   184  AGAACCAGTTCTCCCTGAGGCTGAGCTCTTTGACCGCCGCAGACACGGCTGTCTATCACTGTGCGAGGGTGACCTACGATTTTTGGAGGG  273
V  92.7% (229/247)  IGHV4-39*01  230  ..................A..........G......................G...T..........-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (14/14)   IGHD3-3*01   5    --------------------------------------------------------------------------..............--  18

                                      GT-------------------->                                 
                                      D  H  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_9136   274  ACCACTACTACGCTATGGACGTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  329
J  94.3% (50/53)    IGHJ6*02     10   ---.........G..................A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_345820

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           369     2e-104
IGHD1-26*01                                                                                           16.1    2.4   
IGHJ1*01                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGAC	GGGAGCTA	TCCCTGGCGACTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGATCGACGGGAGCTATCCCTGGCGACTTC	SRSTGAIPGDF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	288	262	26	0	91


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  F 
                    Query_9137   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCGACTTT  91
V  91.0% (262/288)  IGHV1-18*01  7    ....................................................................................AG..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  T  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  R  A  A  Y  N  A  D  T  K  Y  T  P 
                    Query_9137   92   GGTGTCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGTTGGGATGGAGAGCCGCTTACAATGCTGACACAAAGTATACACCG  181
V  91.0% (262/288)  IGHV1-18*01  97   ...A...G.....................................A.........TCAG...........G.A.......C...G...A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  L  T  L  T  T  D  S  S  T  S  T  A  Y  L  D  L  R  S  L  R  S  D  D  T  A 
                    Query_9137   182  AAACTCCAGGGCAGACTCACCTTGACCACCGACTCATCCACGAGCACAGCCTACTTGGACTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  91.0% (262/288)  IGHV1-18*01  187  ..G............G.....A.......A...A....................A....GC.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       L  Y  Y  C  S  R  S  T  G  A  I  P  G  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9137   272  CTTTATTACTGTTCGAGATCGACGGGAGCTATCCCTGGCGACTTCTGGGGCCAGGGCACCCTCGTCACCGTCTCCTCAG  350
V  91.0% (262/288)  IGHV1-18*01  277  G.G.........G.....-------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                              
D  100.0% (8/8)     IGHD1-26*01  9    -----------------------........------------------------------------------------  16
J  97.1% (34/35)    IGHJ1*01     18   --------------------------------------------..................G................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_85560

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD2-21*01                                                                                           18.0    0.59 
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CAGTTTCTGTCTTAGTTTGGACCGGGGAGT	TTGTGGTGG	N/A	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGGGGAGTTTGTGGTGGTTTTGATATG	ARGSFCLSLDRGVCGGFDM	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  N  G  G  S  L  N  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9138   1    ACCCTGTCCCTCACCTGCGCCGTCAATGGTGGGTCCCTCAATGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAG  90
V  92.2% (226/245)  IGHV4-34*01  49   ....................T...T...........T...G..G.......................................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  Q  S  G  T  T  N  Y  K  P  S  L  K  S  R  V  I  T  S  V  D  T  S  K  N 
                    Query_9138   91   TGGATTGGGGAAATCAATCAAAGTGGCACCACCAACTACAAGCCGTCCCTCAAGAGTCGAGTAATCACATCGGTGGACACGTCCAAGAAT  180
V  92.2% (226/245)  IGHV4-34*01  139  ....................T.....A.G............C....................C.C..T...A..A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  F  C  L  S  L  D  R 
                    Query_9138   181  CAGTTCTCCTTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGG  270
V  92.2% (226/245)  IGHV4-34*01  229  .........C.....C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      ----------------------->                               
                                       G  V  C  G  G  F  D  M  W  G  Q  G  T  M  V  T  V  S  
                    Query_9138   271  GGAGTTTGTGGTGGTTTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTT  325
D  100.0% (9/9)     IGHD2-21*01  7    -----.........-----------------------------------------  15
J  97.6% (40/41)    IGHJ3*02     7    --------------.........C...............................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_56308

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGATGGCAG	TTATTATGATAGTAG	GGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGGCAGTTATTATGATAGTAGGGGCATGGACGTC	ARDDGSYYDSRGMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  R  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9139   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTCAGTAGATATAGCATGAACTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-21*01  47   .....................C........................C..........................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  T  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9139   91   AGTGGGTCTCATCCATAACAACTAGCAGTAGTTACATCTACTATGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.8% (232/250)  IGHV3-21*01  137  ................T.GT.G...T...........A.....C..............................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  R  S  V  F  L  Q  M  D  S  L  S  A  E  D  T  A  V  Y  Y  C  A  R  D  D  G  S  Y  Y  D  
                    Query_9139   181  AGAGGTCAGTCTTTCTGCAAATGGACAGCCTGAGTGCCGAGGACACGGCTGTGTATTATTGTGCGAGAGATGATGGCAGTTATTATGATA  270
V  92.8% (232/250)  IGHV3-21*01  227  ...AC...C.G.A..........A..........A.......................C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD3-22*01  4    -------------------------------------------------------------------------------...C.......  14

                                      ---------------->                                 
                                      S  R  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9139   271  GTAGGGGCATGGACGTCTGGGGCCAAGGGACTACGGTCACCGTCTCCTCA  320
D  93.3% (14/15)    IGHD3-22*01  15   ....----------------------------------------------  18
J  97.6% (41/42)    IGHJ6*02     21   --------.......................C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_11230

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           341     6e-96
IGHD6-25*01                                                                                           12.2    35   
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-25*01	IGHJ3*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACT	CGGCTA	AGGTATCGC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTCGGCTAAGGTATCGCTTTGACGTA	DDSAKVSL*R	282	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	167	24	19	3	2	79.2
FR3-IMGT	168	281	114	100	14	0	87.7
CDR3-IMGT (germline)	282	285	4	4	0	0	100
Total	N/A	N/A	286	254	30	2	88.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  P  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T  S  Y 
                    Query_9140   2    CAGCTGGTGCAGTCTGGACCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCATGTAAGGCTTCTGGATATATCTTCACCAGTTAT  91
V  88.8% (254/286)  IGHV1-18*01  7    ..................G.....................................C..C...........T..C.C...T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  T  P  G  E  G  L  E  W  M  G  W  I    S  L  P  *  K  H  R  V  F  T  
                    Query_9140   92   GGCATTAGTTGGGTGCGACAGACCCCTGGAGAAGGGCTTGAGTGGATGGGATGGATCA--GCTTACCATGAAAACACAGAGTATTCACAG  179
V  88.8% (254/286)  IGHV1-18*01  97   ..T..C..C............G........C...........................GC......A...GT......A.C...G.....  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                      E  V  A  G  Q  S  H  H  Y  R  R  H  I  H  E  Y  S  L  H  G  V  G  G  P  Q  I  *  R  H  G  
                    Query_9140   180  AAGTTGCAGGGCAGAGTCACCATTACCGCAGACACATCCACGAGTACAGCCTACATGGAGTTGGGGGGCCTCAGATCTGACGACACGGCC  269
V  88.8% (254/286)  IGHV1-18*01  187  ...C.C.................G...A................C...............C..A..A....G..................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                      P  V  F  L  C  D  D  S  A  K  V  S  L  *  R  M  G  P  R  D  N  G  H  R  L  L   
                    Query_9140   270  CTGTATTTCTGTGCGACGACTCGGCTAAGGTATCGCTTTGACGTATGGGGCCAAGGGACAATGGTCACCGTCTCCTCAG  348
V  88.8% (254/286)  IGHV1-18*01  277  G......A........---------------------------------------------------------------  292
                                       V  Y  Y  C  A                                                                 
D  100.0% (6/6)     IGHD6-25*01  12   ---------------------......----------------------------------------------------  17
J  93.0% (40/43)    IGHJ3*01     8    ------------------------------------.....T..C.............................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_115448

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           339     1e-95
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GTC	TACAACTGG	CGGGAGGGGGCGTTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTCTACAACTGGCGGGAGGGGGCGTTCACTAC	GLQLAGGGVHY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9141   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGCAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.7% (230/243)  IGHV3-33*01  47   ...........................................T.GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  S  N  K  H  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_9141   91   AGTGGGTGGCAATTATATGGTATGATGGAAGTAACAAACACTATGCAGACTCCGTCCAGGGCCGATTCACCATATCCAGAGACAATTCCA  180
V  94.7% (230/243)  IGHV3-33*01  137  ...........G......................T...T................GA................C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  G  L  Q  L  A  G  G  G  V  
                    Query_9141   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCTGTATATTACTGTGGTCTACAACTGGCGGGAGGGGGCGTTC  270
V  94.7% (230/243)  IGHV3-33*01  227  ........C...........................C...G...........G..........---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (9/9)     IGHD1-1*01   3    ------------------------------------------------------------------.........---------------  11

                                      ---->                                  
                                      H  Y  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_9141   271  ACTACAGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.4% (38/39)    IGHJ4*02     10   .....T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_115449

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ2*01                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	TACTATAATCCTAGTGGTTATTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACTATAATCCTAGTGGTTATTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGYYGYWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	239	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_9142   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.6% (239/245)  IGHV4-59*01  49   ............................................................A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  I  S  K  N 
                    Query_9142   91   TGGATTGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGATATCTCCAAGAAC  180
V  97.6% (239/245)  IGHV4-59*01  139  ........G....................................................................C.CG.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  Y  Y 
                    Query_9142   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACTACTATAATCCTAGTGGTTATTAC  270
V  97.6% (239/245)  IGHV4-59*01  229  ...................G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (21/24)    IGHD3-22*01  5    ------------------------------------------------------------------......G..AG.............  28

                                      -------------------->                                  
                                       G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9142   271  GGGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  325
J  100.0% (52/52)   IGHJ2*01     2    ---....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_115444

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           329     3e-92
IGHD4-17*01                                                                                           21.8    0.041
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCC	CTACGGTGACT	GCGTGGGGT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCCTACGGTGACTGCGTGGGGTAACTGGTTCGACCCC	ARGPTVTAWGNWFDP	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  N  F  Y  W  S  W  I  R  Q  F  P  G  K  G 
                    Query_9143   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAATTTCTACTGGAGCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  92.3% (229/248)  IGHV4-31*03  49   ................................................GG..A......................CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  Y  S  G  S  A  Y  S  K  P  F  L  E  S  R  V  T  I  S  L  D  T  S 
                    Query_9143   91   CTGGAGTGGATTGGGTACATCTCTTACAGTGGGAGCGCCTACTCTAAGCCGTTCCTCGAGAGTCGAGTGACCATTTCACTGGACACGTCT  180
V  92.3% (229/248)  IGHV4-31*03  139  ......................A.............A......AC..C....C....A..........T.....A...G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  M  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  T  V  T  A  W 
                    Query_9143   181  AAGAACCAGTTCTCCCTGAAGATGAACTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGGGGCCCTACGGTGACTGCGTGG  270
V  92.3% (229/248)  IGHV4-31*03  229  .....................C...G...........................G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (11/11)   IGHD4-17*01  4    -------------------------------------------------------------------------...........------  14

                                      ----------------->                                  
                                       G  N  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_9143   271  GGTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  322
J  98.0% (48/49)    IGHJ5*02     3    ---.....................................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_115443

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           307     1e-85
IGHD3-3*01                                                                                            23.8    0.011
IGHJ5*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TATGGGGTCCAC	TTTTTGGAGTGG	AATTCTCCCGGCG	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATATGGGGTCCACTTTTTGGAGTGGAATTCTCCCGGCGGACCTC	ARDMGSTFWSGILPADL	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  R  S  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9144   1    GGTCCCTGAGACTCTCCTGTGTGGCCTCTGGATTCACCTTCAGAAGCCACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTCG  90
V  89.2% (223/250)  IGHV3-74*01  47   .....................CA....................T...T........................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  A  R  I  N  K  E  G  G  N  T  V  Y  A  D  S  V  N  G  R  F  T  L  S  R  D  N  A  
                    Query_9144   91   AGTGGATCGCACGTATTAATAAAGAGGGGGGCAACACAGTCTACGCGGACTCTGTGAATGGCCGATTCACCCTCTCCAGAGACAACGCCA  180
V  89.2% (223/250)  IGHV3-74*01  137  T....G..T............GT..T...A.T.G....AG............C.....G............A..................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  M  V  Y  L  Q  M  S  S  L  R  P  D  D  T  A  V  C  F  C  A  R  D  M  G  S  T  F  W  
                    Query_9144   181  AGAACATGGTGTATCTGCAAATGAGCAGTCTGAGACCCGACGACACGGCTGTCTGTTTCTGTGCAAGAGATATGGGGTCCACTTTTTGGA  270
V  89.2% (223/250)  IGHV3-74*01  227  ......C.C...............A..........G....G...........G.A..A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD3-3*01   10   ----------------------------------------------------------------------------------........  17

                                      GT-------------------->                                  
                                      S  G  I  L  P  A  D  L  W  G  P  G  T  L  V  T  V  S  S  
                    Query_9144   271  GTGGAATTCTCCCGGCGGACCTCTGGGGCCCGGGAACCCTGGTCACCGTCTCTTCAG  327
D  100.0% (12/12)   IGHD3-3*01   18   ....-----------------------------------------------------  21
J  92.5% (37/40)    IGHJ5*02     12   -----------------....C........A.....................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_302196

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           382     4e-108
IGHD5-12*01                                                                                           14.1    9.5   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGAGA	TGGCTAC	AATGACCGAGGGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTAGAGATGGCTACAATGACCGAGGGGCCTTTGGCTCC	ARGRDGYNDRGAFGS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	267	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  T  S  G  Y  S  F  D  S  Y
                    Query_9145   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACTTCTGGATACTCCTTCGACAGTTA  90
V  92.1% (267/290)  IGHV1-69*01  6    ................................................................G........GG.A.....AG...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  R  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  V  F  G  T  P  N  Y  A  Q
                    Query_9145   91   TGATATTAGATGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGATCATCCCTGTCTTTGGAACACCAAACTACGCACA  180
V  92.1% (267/290)  IGHV1-69*01  96   ..C...C..C..........................G...........................A.......T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  A  R  T  V  Y  M  E  L  S  S  L  R  S  D  D  T  A
                    Query_9145   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCGCGCGCACAGTTTATATGGAGCTGAGTAGCCTGAGATCTGACGACACGGC  270
V  92.1% (267/290)  IGHV1-69*01  186  ........................................A..A......CC..C...........C..............G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  F  C  A  R  G  R  D  G  Y  N  D  R  G  A  F  G  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9145   271  CGTCTATTTCTGTGCGAGAGGTAGAGATGGCTACAATGACCGAGGGGCCTTTGGCTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  92.1% (267/290)  IGHV1-69*01  276  ...G....A...........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD5-12*01  11   ---------------------------.......--------------------------------------------------------  17
J  95.5% (42/44)    IGHJ4*02     5    ------------------------------------------------.....A..A.................................  46

                                        
                                        
                    Query_9145   361  AG  362
J  95.5% (42/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_265569

Length=414
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           378     4e-107
IGHD3-3*01                                                                                            16.1    2.7   
IGHJ5*01                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAAACAGTCGGCACACTGAGA	ATTATACC	CCCACGTCGGACGTTCTAG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAAACAGTCGGCACACTGAGAATTATACCCCCACGTCGGACGTTCTAGGGTTCGACTCC	ARRNSRHTENYTPTSDVLGFDS	290	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	44	7	0	86.3
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	100	14	0	87.7
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	294	268	26	0	91.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  P  C  K  G  S  G  Y  S  F  T  
                    Query_9146   3    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCCCCTGTAAGGGTTCTGGATACAGCTTTACCA  92
V  91.2% (268/294)  IGHV5-51*01  2    ....G......................................................T..............................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  W  R  Q  M  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_9146   93   GTTACTGGATCGCTTGGTGGCGCCAGATGCCCGGGAAAGGCCTGGAATTAATGGGGATCATCTACCCTGGTGACTCTGATACTAGATACG  182
V  91.2% (268/294)  IGHV5-51*01  92   .C..........GC...GT...........................G.GG..............T.................C......A  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      D  P  S  F  Q  G  Q  A  T  I  Y  A  D  K  S  I  S  T  A  Y  L  Q  M  S  S  L  K  A  S  D  
                    Query_9146   183  ATCCGTCCTTCCAAGGTCAGGCCACCATTTATGCCGACAAGTCCATCAGCACCGCCTACCTGCAGATGAGCAGCCTGAAGGCCTCGGACA  272
V  91.2% (268/294)  IGHV5-51*01  182  GC..............C....T......C.CA.................................TG.......................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------------------CDR3-IMGT--------------------------->       
                                      T  A  K  Y  F  C  A  R  R  N  S  R  H  T  E  N  Y  T  P  T  S  D  V  L  G  F  D  S  W  G  
                    Query_9146   273  CCGCCAAATACTTCTGTGCGAGACGAAACAGTCGGCACACTGAGAATTATACCCCCACGTCGGACGTTCTAGGGTTCGACTCCTGGGGCC  362
V  91.2% (268/294)  IGHV5-51*01  272  ......TG..T.A...........------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD3-3*01   24   ---------------------------------------------........-------------------------------------  31
J  97.8% (44/45)    IGHJ5*01     7    ------------------------------------------------------------------------..................  24

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_9146   363  AGGGAACCCTGGTCACCGTCTCCTCAG  389
J  97.8% (44/45)    IGHJ5*01     25   .A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40604112


Query= Query_265566

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           315     5e-88
IGHD5-12*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATTACATCGAGA	TGGCTAC	AATAGAGGAGTT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATTACATCGAGATGGCTACAATAGAGGAGTTTTTGCCTTC	ARELHRDGYNRGVFAF	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	224	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  R  T  N  C  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9147   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGGACCAATTGCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  90.7% (224/247)  IGHV3-53*01  47   ...........................................T.G...C.A......C..............................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      Q  W  V  S  L  I  H  S  G  G  T  T  S  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  K  S  T  
                    Query_9147   91   AGTGGGTCTCACTTATTCATAGTGGTGGGACCACGTCCTATTCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAAGTCCACTA  180
V  90.7% (224/247)  IGHV3-53*01  137  ...........G.....T....C.....T.G...A.A...CG........................................T....AG.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  V  Y  L  Q  M  V  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  L  H  R  D  G  Y  N  
                    Query_9147   181  ACACGGTATATCTTCAAATGGTCAACCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGAATTACATCGAGATGGCTACAATA  270
V  90.7% (224/247)  IGHV3-53*01  227  .....C.G............AA..G..........................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD5-12*01  11   -------------------------------------------------------------------------------.......----  17

                                      ---------------->                                  
                                      R  G  V  F  A  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9147   271  GAGGAGTTTTTGCCTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  321
J  93.0% (40/43)    IGHJ4*02     6    --------....A..A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_82505

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43D*01                                                                                          352     3e-99
IGHD2-21*02                                                                                           16.1    2.3  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43D*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAA	GGGTCTACGTCGGTT	TGGTGACT	CTCCTCGACGATCAC	ACGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGGGTCTACGTCGGTTTGGTGACTCTCCTCGACGATCACACGGGATGGACGTC	AKGLRRFGDSPRRSHGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	236	11	0	95.5


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  P  G  F  T  F  H  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9148    1    GGTCCCTGAGACTCTCCTGTGCGGCCCCTGGATTCACCTTTCATGATTATGCCATGCACTGGGTCCGTCAAGCTCCGGGGAAGGGTCTGG  90
V  95.5% (236/247)  IGHV3-43D*01  47   ......................A...T..............G................................................  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  S  L  I  S  W  D  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  K  R  
                    Query_9148    91   AGTGGGTCTCTCTTATTAGTTGGGATGGTGGCACCACATACTATGCAGACTCTGTGAAGGGTCGATTCACCATCTCCAGAGACAAGAGGA  180
V  95.5% (236/247)  IGHV3-43D*01  137  ...............................T.G...C...............................................C..C.  226
                                       E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                       K  N  S  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  L  Y  F  C  A  K  G  L  R  R  F  G  D  
                    Query_9148    181  AAAACTCCCTGTATCTGCAAATGAACAGTCTGGGAGCTGAGGACACCGCCTTGTATTTCTGCGCAAAGGGTCTACGTCGGTTTGGTGACT  270
V  95.5% (236/247)  IGHV3-43D*01  227  ................................A........................A...T.....-----------------------  293
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (8/8)     IGHD2-21*02   13   ----------------------------------------------------------------------------------........  20

                                       -IMGT----------------------->                                 
                                       S  P  R  R  S  H  G  M  D  V  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_9148    271  CTCCTCGACGATCACACGGGATGGACGTCTGGGGCCAAGGGACCGCGGTCACCGTCTCCTCA  332
J  95.7% (45/47)    IGHJ6*02      16   ---------------....T........................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_82504

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           330     1e-92
IGHD1-26*01                                                                                           12.2    33   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	AGTGGG	TTGTGGGACGGACAACAT	TACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGTGGGTTGTGGGACGGACAACATTACTCCTATTCCGGTATGGACGTC	ARSGLWDGQHYSYSGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	229	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  L  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_9149   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGTTTAACATTTAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (229/247)  IGHV3-11*06  47   .....................C.........A..C..C..C.................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  S  I  H  T  H  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9149   91   AGTGGGTTTCATATATTAGCAGCAGTAGTATTCACACACACTCTGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  92.7% (229/247)  IGHV3-11*06  137  .............C.....T..T.......G.T.....A...AC....................A.........................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  S  G  L  W  D  G  Q  
                    Query_9149   181  AGAACTCAGTGTATCTGCAAATGAACAGCCTGAGAGCCGACGATACGGCTGTCTATTACTGTGCGAGGAGTGGGTTGTGGGACGGACAAC  270
V  92.7% (229/247)  IGHV3-11*06  227  ........C...............................G..C........G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD1-26*01  6    --------------------------------------------------------------------......----------------  11

                                      IMGT--------------------->                                 
                                      H  Y  S  Y  S  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9149   271  ATTACTCCTATTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTGTCCTCA  329
J  93.0% (53/57)    IGHJ6*02     6    --....A...C.A.......................................C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_82507

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           321     6e-90
IGHD4-17*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGAACA	ACTACGGTGAC	CCAC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGAACAACTACGGTGACCCACACTTTGACTCC	ARWNNYGDPHFDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  I  N  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9150   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCATTAATTACTCCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.2% (224/243)  IGHV4-59*01  49   ........................................G..G.....A........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  H  H  S  G  S  T  D  Y  D  P  S  L  K  G  R  V  I  I  S  T  Y  T  P  K  N 
                    Query_9150   91   TGGATTGGGTATTTCCACCACAGTGGGAGCACCGACTACGACCCCTCCCTCAAGGGTCGAGTCATCATATCAACATACACGCCCAAGAAC  180
V  92.2% (224/243)  IGHV4-59*01  139  ............A..T.TT..............A.....A..............A.........C.......GT.G.....T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  H  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  W  N  N  Y  G  D  P  H  F 
                    Query_9150   181  CAGTTTTCCCTGAAGCTGCACTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGATGGAACAACTACGGTGACCCACACTTT  270
V  92.2% (224/243)  IGHV4-59*01  229  .....C............AG.................................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (11/11)   IGHD4-17*01  3    ----------------------------------------------------------------------...........---------  13
J  91.1% (41/45)    IGHJ4*02     4    -------------------------------------------------------------------------------------.....  8

                                      ----->                                  
                                       D  S  W  G  Q  G  A  L  V  V  V  S  S  
                    Query_9150   271  GACTCCTGGGGCCAGGGAGCCCTGGTCGTCGTCTCCTCAG  310
J  91.1% (41/45)    IGHJ4*02     9    ....A.............A........AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_82506

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           300     8e-84
IGHD6-19*01                                                                                           12.2    30   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTGGC	GGCTGG	CTTAC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTGGCGGCTGGCTTACGGACGTC	TRGGGWLTDV	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	218	26	0	89.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  A  S  G  G  S  I  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9151   1    ACCCTGTCCCTCACCTGCACTGCCTCTGGAGGCTCCATCAGTGGTTTCTACTGGAGCTGGATTCGGCAGCCCCCAGGGAAGGGGCTGGAG  90
V  89.3% (218/244)  IGHV4-59*01  49   ......................T......T............A...A...............C....................A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  H  Y  S  G  H  T  N  Y  N  P  S  L  R  S  R  V  I  I  S  L  D  T  S  N  N 
                    Query_9151   91   TGGATTGGGAATATCCACTACAGTGGGCACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCATCATATCGCTGGACACGTCCAACAAC  180
V  89.3% (218/244)  IGHV4-59*01  139  .........T.....T.T.........AG.......................A...........C......AG.A...........G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  I  S  L  K  V  N  S  G  T  A  A  D  T  A  L  Y  Y  C  T  R  G  G  G  W  L  T  D  V  W 
                    Query_9151   181  CAGATCTCCCTGAAGGTGAACTCTGGAACCGCTGCGGACACGGCCCTCTATTATTGTACGAGAGGTGGCGGCTGGCTTACGGACGTCTGG  270
V  89.3% (218/244)  IGHV4-59*01  229  ...T...........C...G.....TG..................G.G.....C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  13   ---------------------------------------------------------------------......---------------  18
J  100.0% (40/40)   IGHJ6*02     23   --------------------------------------------------------------------------------..........  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_9151   271  GGCCAAGGGACCACGGTCACCGTCTCCTCA  300
J  100.0% (40/40)   IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_82501

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*08                                                                                            291     5e-81
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*08	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTATTACGGTATGGACGTC	AREAYSYYGMDV	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	215	29	0	88.1


Alignments

                                     <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                        L  R  L  S  C  T  V  S  G  G  S  I  A  N  H  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_9152  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCGCTAATCACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  88.1% (215/244)  IGHV4-4*08  50   .....TCC...A..........................AG..G.T.........G...................................  139
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                     ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                     W  I  A  Y  I  S  P  S  G  A  T  N  Y  N  R  S  L  K  S  R  V  T  I  T  A  D  K  S  K  N  
                    Query_9152  94   GGATTGCCTATATCTCTCCCAGTGGGGCCACCAATTACAACCGCTCCCTCAAGAGTCGAGTCACCATAACAGCGGACAAGTCCAAGAACC  183
V  88.1% (215/244)  IGHV4-4*08  140  ......GG.......A.A........AG......C.......C.........................T.C.TA....C...........  229
                                     W  I  G  Y  I  Y  T  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                     MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                     Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D  
                    Query_9152  184  AGTTTTCCCTGAAGGTGAGATCTGTGACCGCCGCGGACACGGCCGTATATTATTGTGCCAGAGAGGCCTACTCTTATTACGGTATGGACG  273
V  88.1% (215/244)  IGHV4-4*08  230  ....C.........C....C..............A...........G.....C.....G.....--------------------------  293
                                     Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  91.4% (53/58)    IGHJ6*02    5    -------------------------------------------------------------------.....AC..C.............  27

                                     ->                                 
                                     V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_9152  274  TCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  308
J  91.4% (53/58)    IGHJ6*02    28   ..........A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_82503

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           265     5e-73
IGHD3-16*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAGGCCCCGG	TTACCTTTGGGGGAGT	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGAGGCCCCGGTTACCTTTGGGGGAGTCTAC	ARDEAPVTFGGVY	230	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	47	4	0	92.2
CDR2-IMGT	92	115	24	18	6	0	75
FR3-IMGT	116	229	114	101	13	0	88.6
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	197	28	0	87.6


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  V  S  D  S  G  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  L  A  A  I  W  Y  D
                    Query_9153   13   GTCTGGATTCACCGTCAGTGATTCTGGCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGCTGGCTGCTATTTGGTATGA  102
V  87.6% (197/225)  IGHV3-33*01  72   .............T.....AGC.A......G.......................................G....A.T...A........  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  D  K  K  F  Y  T  D  S  V  K  D  R  F  T  I  S  R  D  N  Y  R  N  T  V  Y  L  Q  M  D
                    Query_9153   103  CGGGGATAAAAAATTCTATACAGACTCCGTGAAGGACCGATTCACCATCTCCAGAGACAATTACAGGAATACGGTGTACCTGCAAATGGA  192
V  87.6% (197/225)  IGHV3-33*01  162  T..AAG...T....A....G...............G..........................C..A...C...C....T.........A.  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------CDR3-IMGT-------------->              
                                        G  L  R  A  D  D  T  G  V  Y  Y  C  A  R  D  E  A  P  V  T  F  G  G  V  Y  W  G  Q  G  T
                    Query_9153   193  CGGCCTGAGAGCCGACGACACGGGTGTCTATTACTGTGCGAGAGATGAGGCCCCGGTTACCTTTGGGGGAGTCTACTGGGGCCAGGGAAC  282
V  87.6% (197/225)  IGHV3-33*01  252  .A.............G.......C...G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  93.8% (15/16)    IGHD3-16*01  10   --------------------------------------------------------....G...........------------------  25
J  100.0% (38/38)   IGHJ4*02     11   ------------------------------------------------------------------------..................  28

                                                          
                                        L  V  T  V  S  S  
                    Query_9153   283  CCTGGTCACCGTCTCCTCAG  302
J  100.0% (38/38)   IGHJ4*02     29   ....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_82502

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD2-15*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACTTAGGGCGAGGGGTC	GTGGTGGTAGC	CCTACCTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAACTTAGGGCGAGGGGTCGTGGTGGTAGCCCTACCTGGTACTTTGACTAC	ARELRARGRGGSPTWYFDY	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9154   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9154   91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  93.1% (228/245)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  Q  L  N  F  V  T  P  E  D  T  A  V  Y  Y  C  A  R  E  L  R  A  R  G  R  G  G 
                    Query_9154   181  CAGTTCTCCCTGCAGCTGAACTTTGTGACTCCCGAGGACACGGCTGTGTATTACTGCGCAAGAGAACTTAGGGCGAGGGGTCGTGGTGGT  270
V  93.1% (228/245)  IGHV4-59*01  229  ............A......G..C......CG.T.C.........C...........T..G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (11/11)   IGHD2-15*01  12   ----------------------------------------------------------------------------------........  19

                                      ----------------------->                                  
                                       S  P  T  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9154   271  AGCCCTACCTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  100.0% (11/11)   IGHD2-15*01  20   ...-------------------------------------------------------  22
J  100.0% (46/46)   IGHJ4*02     3    ------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_255494

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           419     2e-119
IGHD1-1*01                                                                                            14.1    9.0   
IGHJ3*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-1*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCATATATAGT	CTGGAAC	C	TATCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCATATATAGTCTGGAACCTATC	ATIYSLEPI	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	286	277	9	0	96.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  L 
                    Query_9155   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGGTACACCTTTACCAGCCTT  91
V  96.9% (277/286)  IGHV1-18*01  7    .......................................................................T...............TA.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_9155   92   GGTTTCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAG  181
V  96.9% (277/286)  IGHV1-18*01  97   ...A...G..................................................................................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  D  R  V  S  V  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_9155   182  AAGCTCCAGGACAGAGTCTCCGTGACCACAGACACATCCACGAGCACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.9% (277/286)  IGHV1-18*01  187  ..........G.......A..A......................................C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------CDR3-IMGT-------->                                  
                                       V  Y  Y  C  A  T  I  Y  S  L  E  P  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_9155   272  GTGTATTACTGTGCGACCATATATAGTCTGGAACCTATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  344
V  96.9% (277/286)  IGHV1-18*01  277  ................---------------------------------------------------------  292
                                       V  Y  Y  C  A                                                           
D  100.0% (7/7)     IGHD1-1*01   8    ---------------------------.......---------------------------------------  14
J  97.4% (37/38)    IGHJ3*02     13   -----------------------------------...................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_169693

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAA	ACGAAT	TATGAAAGTA	CTGCGGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAACGAATTATGAAAGTACTGCGGGGCTTGACTTC	AKTNYESTAGLDF	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9156   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGCAGCTATGGCATGAGCTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  93.1% (231/248)  IGHV3-23*01  47   ....................................C..............C.....................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  T  N  G  I  G  S  S  T  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_9156   91   AGTGGGTCTCACTTACTAATGGTATCGGAAGTAGCACGCACTACGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCA  180
V  93.1% (231/248)  IGHV3-23*01  137  ...........GC..T..G.....GT..TG.......AT.........................G......A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  T  N  Y  E  S  T  A  
                    Query_9156   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTATATTACTGTGCAAAAACGAATTATGAAAGTACTGCGG  270
V  93.1% (231/248)  IGHV3-23*01  227  ....................................C...........................G...----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (9/10)     IGHD3-22*01  8    --------------------------------------------------------------------------.....T....------  17

                                      ---------->                                  
                                      G  L  D  F  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_9156   271  GGCTTGACTTCTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  315
J  95.2% (40/42)    IGHJ4*02     7    ---......A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_82508

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD6-19*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAGGGAGT	AGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCC	ARAGSSGWLDS	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  T  S  D  Y  W  S  W  I  R  K  P  P  G  K  G  L  E  
                    Query_9157   4    CCCTGAGACTCTCCTGTACTGTCTCTGGGGGCTCCATAACTAGTGACTACTGGAGCTGGATCCGGAAGCCCCCTGGGAAGGGACTGGAGT  93
V  90.9% (221/243)  IGHV4-59*01  50   .....TCC...A....C...........T........C.G....T....................C.......A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  D  Y  N  S  S  L  K  S  R  V  T  I  S  F  D  R  S  K  N  
                    Query_9157   94   GGATTGGATATATCTATTACAGTGGGAGCACCGACTACAATTCCTCCCTCAAGAGTCGAGTCACCATATCATTTGACAGGTCCAAGAACC  183
V  90.9% (221/243)  IGHV4-59*01  140  .......G........................A.......CC.............................G.A....C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  S  S  G  W  L  D  S  
                    Query_9157   184  AGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCCT  273
V  90.9% (221/243)  IGHV4-59*01  230  ..............C....C..........................G............A...---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (9/9)     IGHD6-19*01  10   -----------------------------------------------------------------------.........----------  18
J  97.5% (39/40)    IGHJ4*02     7    ---------------------------------------------------------------------------------......A..  15

                                                                     
                                      W  G  Q  G  T  L  V  T  V  S  S
                    Query_9157   274  GGGGCCAGGGAACCCTGGTCACCGTCTCCTC  304
J  97.5% (39/40)    IGHJ4*02     16   ...............................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_39510

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_9158   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  98.3% (284/289)  IGHV5-51*03  6    ..............................................................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_9158   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ...................................................G............................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9158   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9158   271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  98.3% (284/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_39511

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTCC	AALIAASHFTDS	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	276	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_9159   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  96.5% (276/286)  IGHV5-51*01  6    ..................................................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_9159   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  96.5% (276/286)  IGHV5-51*01  96   ......................A.......G.............G..........................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_9159   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAGCACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  96.5% (276/286)  IGHV5-51*01  186  ....................C...................A...........................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9159   271  CGTGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.5% (276/286)  IGHV5-51*01  276  .A..............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  97.6% (40/41)    IGHJ4*02     8    ------------------------------------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_39513

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            339     1e-95
IGHJ2*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	N/A	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	GCACGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCACGGATCCTGGTGCTTCGATTTC	ARHGSWCFDF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  E  A  S  G  F  T  F  N  T  Y  W  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_9160  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAATACCTACTGGATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-7*03  47   .....................C....................G..G...T......A.................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  T  D  G  S  T  Q  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_9160  91   AGTGGGTGGCCAACATAAAGACAGATGGAAGTACTCAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACCCCA  180
V  93.9% (232/247)  IGHV3-7*03  137  ....................CA..........GAGA..................................................G...  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                     T  N  S  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  H  G  S  W  C  F  D  
                    Query_9160  181  CGAACTCACTGTATTTGCAACTGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGGCACGGATCCTGGTGCTTCGATT  270
V  93.9% (232/247)  IGHV3-7*03  227  A.............C.....A..............................................-----------------------  293
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  94.0% (47/50)    IGHJ2*01    4    ----------------------------------------------------------------------------.....A.......C  17

                                     ->                                  
                                     F  W  G  R  G  T  L  V  S  V  S  S  
                    Query_9160  271  TCTGGGGCCGTGGCACCCTGGTCAGTGTCTCCTCAG  306
J  94.0% (47/50)    IGHJ2*01    18   ........................C...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_39514

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            380     1e-107
IGHD3-9*01                                                                                            35.3    4e-06 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	ATTACGATATCTTGACTGGTAATT	GGGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCATTACGATATCTTGACTGGTAATTGGGCGTTTGATTAC	ARDHYDILTGNWAFDY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  D  Y
                    Query_9161  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACTTTCAGCGACTA  90
V  91.8% (267/291)  IGHV1-2*04  6    ..................G...........................................................C....C..G...  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       Y  I  H  W  V  R  Q  G  P  G  Q  G  L  E  W  M  G  W  I  N  P  R  T  G  D  T  N  Y  A  Q
                    Query_9161  91   CTATATCCACTGGGTGCGACAGGGCCCTGGGCAAGGGCTTGAGTGGATGGGATGGATCAACCCTCGGACTGGAGACACAAATTATGCACA  180
V  91.8% (267/291)  IGHV1-2*04  96   ......G................C......A.................................AAC.G...T.G......C........  185
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       R  F  Q  G  W  V  T  M  S  R  D  T  S  T  T  T  V  Y  M  D  L  S  R  L  K  S  D  D  T  A
                    Query_9161  181  GAGGTTTCAGGGCTGGGTCACCATGTCTAGGGACACGTCCACCACCACAGTTTACATGGACCTGAGCAGGCTGAAATCTGACGACACGGC  270
V  91.8% (267/291)  IGHV1-2*04  186  ..A......................A.C.............T..G.....CC........G.............G...............  275
                                       K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                     ------------><-------------------CDR3-IMGT------------------>                             
                                       V  Y  Y  C  A  R  D  H  Y  D  I  L  T  G  N  W  A  F  D  Y  W  G  Q  G  T  L  L  T  V  S
                    Query_9161  271  CGTTTATTACTGTGCGAGAGATCATTACGATATCTTGACTGGTAATTGGGCGTTTGATTACTGGGGCCAGGGAACCCTGCTCACCGTCTC  360
V  91.8% (267/291)  IGHV1-2*04  276  ...G.................---------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                        
D  91.7% (22/24)    IGHD3-9*01  3    -----------------------..........T.........T...-------------------------------------------  26
J  95.3% (41/43)    IGHJ4*02    6    ----------------------------------------------------.....C.....................G..........  43

                                          
                                       S  
                    Query_9161  361  CTCAG  365
J  95.3% (41/43)    IGHJ4*02    44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_265561

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           213     2e-57
IGHD3-16*01                                                                                           25.7    0.003
IGHJ3*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACCTAT	GTTTGGGGGAGTT	TACGCCGCAATCACGATTGCCTTAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACCTATGTTTGGGGGAGTTTACGCCGCAATCACGATTGCCTTACTGTC	ARGLLIEDPTYVWGSLRRNHDCLTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	35	16	0	68.6
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	87	27	0	76.3
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	190	54	0	77.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  V  R  Q  P  P  G  G  G  L  Q 
                    Query_9162   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGAACTTACTACTGGCACTGGGTGCGGCAACCTCCAGGGGGGGGTCTGCAG  90
V  77.9% (190/244)  IGHV4-59*01  49   .......................C.......G.......A.T.G..........AG....A.C.....G..C......AA...A...G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  A  M  F  L  S  T  G  T  T  L  Y  N  P  S  V  R  G  R  V  T  V  S  G  D  M  S  R  N 
                    Query_9162   91   TGGCTTGCCATGTTCTTATCCACTGGGACCACCCTCTACAACCCCTCCGTCAGGGGTCGTGTCACCGTGTCGGGCGACATGTCTCGGAAT  180
V  77.9% (190/244)  IGHV4-59*01  139  ...A...GGTATA...AT.A..G.....G....AA.............C...A.A....A......A.A..A.TA....C...CAA...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_9162   181  CAGTTGTCCCTCAACCTCATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACCTAT  270
V  77.9% (190/244)  IGHV4-59*01  229  .....C.....G..G..G.G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  L  R  R  N  H  D  C  L  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_9162   271  GTTTGGGGGAGTTTACGCCGCAATCACGATTGCCTTACTGTCTGGGGCCAGGGGACACCGGTCACCGTCTCTTCAG  346
D  100.0% (13/13)   IGHD3-16*01  14   .............---------------------------------------------------------------  26
J  92.1% (35/38)    IGHJ3*01     13   --------------------------------------............A......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_39516

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           265     5e-73
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ3*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTCGCCAA	ATTACGATTTCTGGAATGGTTTTTA	CATTACCAAAAAAGGA	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCGCCAAATTACGATTTCTGGAATGGTTTTTACATTACCAAAAAAGGAGCTTTTGATATC	ARESPNYDFWNGFYITKKGAFDI	225	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	98	51	43	2	6	84.3
CDR2-IMGT	99	110	21	10	2	9	47.6
FR3-IMGT	111	224	114	101	13	0	88.6
CDR3-IMGT (germline)	225	232	8	8	0	0	100
Total	N/A	N/A	247	210	22	15	85


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  N  F  N  H  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9163   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAATTTTAACCACATTAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  85.0% (210/247)  IGHV3-53*01  47   ..........................................G.AGC...T....G.G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V                 G  D  N  T  A  Y  A  E  S  V  R  G  R  F  T  I  S  R  D  N  S  M  
                    Query_9163   91   AGTGGGTC---------------GGTGATAACACAGCCTATGCAGAGTCCGTGAGGGGCCGATTCACTATCTCCAGAGACAATTCCATGA  165
V  85.0% (210/247)  IGHV3-53*01  137  ........TCAGTTATTTATAGC....G..G....TA...C.....C.......A............C...................A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------------C
                                      N  T  V  F  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R  E  S  P  N  Y  D  F  W  
                    Query_9163   166  ACACGGTGTTTCTTCAAATGAACAGCCTGAGAGCCGGGGACACGGCCGTTTACTATTGTGCGAGAGAGTCGCCAAATTACGATTTCTGGA  255
V  85.0% (210/247)  IGHV3-53*01  227  .....C...A..........................A............G..T..C...........-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  88.0% (22/25)    IGHD3-3*01   3    ---------------------------------------------------------------------------..........T....  17

                                      DR3-IMGT----------------------------->                                  
                                      N  G  F  Y  I  T  K  K  G  A  F  D  I  W  G  Q  G  T  V  V  I  V  P  S  
                    Query_9163   256  ATGGTTTTTACATTACCAAAAAAGGAGCTTTTGATATCTGGGGCCAGGGGACAGTGGTCATCGTCCCTTCAG  327
D  88.0% (22/25)    IGHD3-3*01   18   G.....A...--------------------------------------------------------------  27
J  91.3% (42/46)    IGHJ3*02     5    --------------------------....................A......A......C....T......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_39517

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           363     1e-102
IGHD5-12*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGGGAAGG	GGATCTAGTGCCGACGATT	T	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGGGAAGGGGATCTAGTGCCGACGATTTCTTTGACCTC	AREGGRGSSADDFFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9164   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-21*01  47   ...................................................G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  L  S  S  S  G  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  F  
                    Query_9164   91   AGTGGGTCTCATCGCTTAGTAGTAGTGGTAGTTACATTTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACTTCA  180
V  96.4% (241/250)  IGHV3-21*01  137  .............CA...........A..........A................................................GC..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  G  G  R  G  S  S  
                    Query_9164   181  AGAATTCACTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGGGGGGAAGGGGATCTAGTG  270
V  96.4% (241/250)  IGHV3-21*01  227  ....C.......A.........................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.2% (16/19)    IGHD5-12*01  3    --------------------------------------------------------------------------------....A.....  12

                                      T------------------>                                  
                                      A  D  D  F  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9164   271  CCGACGATTTCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  84.2% (16/19)    IGHD5-12*01  13   G.T......---------------------------------------------  21
J  95.5% (42/44)    IGHJ4*02     5    ----------.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_39518

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           383     1e-108
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	ARPSSASGWHFDN	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	18	6	0	75
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	18	6	0	75
FR3-IMGT	175	288	114	106	8	0	93
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	269	24	0	91.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  
                    Query_9165   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCA  91
V  91.8% (269/293)  IGHV5-51*03  2    .............................G.............G.........................G.........C.GC..T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  D  I  R  Y  
                    Query_9165   92   GTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGATATTAGATATA  181
V  91.8% (269/293)  IGHV5-51*03  92   .C..C.......G..................................................AT...GG...........CC.....C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_9165   182  GTCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  91.8% (269/293)  IGHV5-51*03  182  .C...............................C..A.AA........G.........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  G  M  Y  Y  C  A  R  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9165   272  CCGGCATGTATTACTGTGCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  361
V  91.8% (269/293)  IGHV5-51*03  272  ...C...................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ----------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    ---------------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_265560

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            344     6e-97
IGHD3-16*02                                                                                           39.1    3e-07
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCAA	GAATTGGGCGTTC	TGATTACCTTTGGGGGAGTTATC	CCA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAATTGGGCGTTCTGATTACCTTTGGGGGAGTTATCCCAAC	ARIGRSDYLWGSYPN	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_9166   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACATTTGATGATTATGCCATGCACTGGGTCCGGCAAGTTCCAGGGAAGGGCCTAG  90
V  94.7% (233/246)  IGHV3-9*01   47   .....................................C..................................C...............G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  W  D  S  G  K  K  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9166   91   AATGGGTCTCAAGTATTAGTTGGGATAGTGGTAAGAAACACTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.7% (233/246)  IGHV3-9*01   137  .G.........G...........A.........GC.T.GG..................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  I  G  R  S  D  Y  L  
                    Query_9166   181  AGAACTCCCTCTTTCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAGAATTGGGCGTTCTGATTACCTTT  270
V  94.7% (233/246)  IGHV3-9*01   227  ..........G.A.....................................................------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  95.7% (22/23)    IGHD3-16*02  7    -------------------------------------------------------------------------------.......G...  17

                                      ---------------->                                  
                                      W  G  S  Y  P  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9166   271  GGGGGAGTTATCCCAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  95.7% (22/23)    IGHD3-16*02  18   ............---------------------------------------  29
J  100.0% (36/36)   IGHJ4*02     13   ---------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_302194

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           325     3e-91
IGHD6-19*01                                                                                           21.8    0.043
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCTTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCTTAGTGGTACAGTGGGTGGCTGGTACAGGACCCCCTTTTGACTAC	ARDPALVVQWVAGTGPPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  A  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9167   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTGCCTATAGTATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  91.6% (229/250)  IGHV3-21*01  47   ............................TG.....AC.......AG......C.....C..........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  R  S  G  T  Y  T  F  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9167   91   AGTGGGTCTCGTCCATTAGTCGGAGTGGCACTTACACATTCTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.6% (229/250)  IGHV3-21*01  137  ..........A.........A.T...A.T.G.....T..A.............G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  L  V  V  Q  
                    Query_9167   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATATATTACTGTGCGAGAGATCCAGCCTTAGTGGTACAGT  270
V  91.6% (229/250)  IGHV3-21*01  227  ....C.............................................G.G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  P  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9167   271  GGGTGGCTGGTACAGGACCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  100.0% (43/43)   IGHJ4*02     6    -----------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_56307

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9168   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  98.4% (239/243)  IGHV4-59*01  49   ......................................................................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9168   91   TGGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  .........T................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_9168   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (18/20)    IGHD5-18*01  1    ----------------------------------------------------------------..........C.....T...------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9168   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_222149

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9169   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_9169   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_9169   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9169   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_222140

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           310     1e-86
IGHD3-3*01                                                                                            23.8    0.011
IGHJ4*02                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TATGGGGTCCAC	TTTTTGGAGTGG	AATTCTCCCGGCGGCCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATATGGGGTCCACTTTTTGGAGTGGAATTCTCCCGGCGGCCCTC	ARDMGSTFWSGILPAAL	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  R  S  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9170   1    GGTCCCTGAGACTCTCCTGTGTGGCCTCTGGATTCACCTTCAGAAGCCACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTCG  90
V  89.6% (224/250)  IGHV3-74*01  47   .....................CA....................T...T........................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  A  R  I  N  K  E  G  G  N  T  V  Y  A  D  S  V  N  G  R  F  T  L  S  R  D  N  A  
                    Query_9170   91   AGTGGATCGCACGTATTAATAAAGAGGGGGGCAACACAGTCTACGCGGACTCTGTGAATGGCCGATTCACCCTCTCCAGAGACAACGCCA  180
V  89.6% (224/250)  IGHV3-74*01  137  T....G..T............GT..T...A.T.G....AG............C.....G............A..................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  M  V  Y  L  Q  M  S  S  L  R  P  D  D  T  A  V  Y  F  C  A  R  D  M  G  S  T  F  W  
                    Query_9170   181  AGAACATGGTGTATCTGCAAATGAGCAGTCTGAGACCCGACGACACGGCTGTCTATTTCTGTGCAAGAGATATGGGGTCCACTTTTTGGA  270
V  89.6% (224/250)  IGHV3-74*01  227  ......C.C...............A..........G....G...........G....A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD3-3*01   10   ----------------------------------------------------------------------------------........  17

                                      GT-------------------->                                  
                                      S  G  I  L  P  A  A  L  W  G  P  G  T  L  V  T  V  S  S  
                    Query_9170   271  GTGGAATTCTCCCGGCGGCCCTCTGGGGCCCGGGAACCCTGGTCACCGTCTCTTCAG  327
D  100.0% (12/12)   IGHD3-3*01   18   ....-----------------------------------------------------  21
J  94.3% (33/35)    IGHJ4*02     14   ----------------------........A.....................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_222141

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     7e-91
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  N  Y  F  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_9171   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTAATTACTTCTGGAGCTGGATTCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   ......................................C....G.....A............C..................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  L  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  I  D  T  P  K  N 
                    Query_9171   91   TGGATTGGGTATATCTATTATAGTGGACTCACCAAGTACAACCCGTCCCTCAAGAGTCGAGTCAGCATATCAATTGACACGCCCAAGAAC  180
V  92.2% (226/245)  IGHV4-59*01  139  ....................C.....GAG......C........C...................C.......G.A......T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_9171   181  CACTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  92.2% (226/245)  IGHV4-59*01  229  ..G............C...............................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_9171   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_222143

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     2e-91
IGHD3-16*01                                                                                           10.3    114  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GCAGAG	ATGAT	N/A	TACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCAGAGATGATTACCTTGACTCC	ASRDDYLDS	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  S  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9172   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTCTGCCATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.3% (227/246)  IGHV3-23*01  47   ................................................A........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  N  G  R  G  S  R  T  D  Y  A  Y  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9172   91   AGTGGGTCTCCAGTGTTAATGGTAGGGGTTCTAGGACGGACTACGCATACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.3% (227/246)  IGHV3-23*01  137  ..........AGC.A...G......T...GG...C..AT........G..........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  T  L  Y  L  E  M  S  S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  R  D  D  Y  L  D  S  
                    Query_9172   181  AGAACACGCTGTATCTGGAAATGAGCAGCCTGAGAGTCGAGGACACGGCCGTATATTATTGTGCGAGCAGAGATGATTACCTTGACTCCT  270
V  92.3% (227/246)  IGHV3-23*01  227  .................C......A...........C.....................C.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD3-16*01  6    ------------------------------------------------------------------------.....-------------  10
J  93.5% (43/46)    IGHJ4*02     3    -----------------------------------------------------------------------------...T......A..  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9172   271  GGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  303
J  93.5% (43/46)    IGHJ4*02     16   ............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_302195

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	279	14	0	95.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  
                    Query_9173   2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCA  91
V  95.2% (279/293)  IGHV5-51*03  2    ....G.....G......................................................................G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  
                    Query_9173   92   GCTACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACA  181
V  95.2% (279/293)  IGHV5-51*03  92   ............G.......................A...................................A....G.....A......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  
                    Query_9173   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACA  271
V  95.2% (279/293)  IGHV5-51*03  182  .................................................C...........G...............A.....T......  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_9173   272  CCGCCGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  361
V  95.2% (279/293)  IGHV5-51*03  272  .....A.G...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD6-19*01  5    --------------------------............----------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_9173   362  CCTCAG  367
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_222145

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           339     2e-95
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCGGACGAATA	ACTATGGTCCGGGGAGT	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGACATCGGACGAATAACTATGGTCCGGGGAGTCCCTTTGACTAC	SRHRTNNYGPGSPFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	234	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  S  T  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_9174   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTAGCACTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  93.2% (234/251)  IGHV4-39*01  49   ...............................G...............T.G...........G...........................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  P  G  G  S  T  Q  Y  I  P  S  L  K  S  R  L  T  M  S  V  D  S  S 
                    Query_9174   91   CTGGAGTGGATTGGGAGTATCTATCCTGGTGGGAGCACCCAGTACATCCCGTCCCTCAAGAGTCGACTCACCATGTCCGTAGACTCGTCC  180
V  93.2% (234/251)  IGHV4-39*01  139  ........................TA.A...........T.C....A...................G.......A.........A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  R  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  S  R  H  R  T  N  N  Y  G 
                    Query_9174   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGAGCGCCGCAGACACGGCTGTGTATTACTGTTCGAGACATCGGACGAATAACTATGGT  270
V  93.2% (234/251)  IGHV4-39*01  229  ...................A..............C............................G.......-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.1% (16/17)    IGHD3-10*01  6    ----------------------------------------------------------------------------------........  13

                                      GT------------------>                                  
                                       P  G  S  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9174   271  CCGGGGAGTCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  94.1% (16/17)    IGHD3-10*01  14   T........----------------------------------------------  22
J  100.0% (44/44)   IGHJ4*02     5    -----------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_222146

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            371     6e-105
IGHD6-19*01                                                                                           18.0    0.57  
IGHJ4*02                                                                                              54.5    1e-11 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	CAAGG	AGTGCCTGGTAC	GGTGGG	GACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGCAAGGAGTGCCTGGTACGGTGGGGACCAC	AGARSAWYGGDH	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	243	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  D  Y  W  M  I  W  V  R  Q  A  P  G  K  G  L  
                    Query_9175   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACTGACTATTGGATGATCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.6% (243/249)  IGHV3-7*03   47   ..........................................G.AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9175   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (243/249)  IGHV3-7*03   137  ..........................................................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  G  A  R  S  A  W  Y  G  
                    Query_9175   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCCGTGTATTACTGTGCGGGAGCAAGGAGTGCCTGGTACGGTG  270
V  97.6% (243/249)  IGHV3-7*03   227  ........................................G........................A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD6-19*01  10   --------------------------------------------------------------------------....G.......----  21

                                      ------->                                  
                                      G  D  H  W  G  Q  G  A  L  I  T  V  S  S  
                    Query_9175   271  GGGACCACTGGGGCCAGGGAGCCCTAATCACCGTCTCCTCAG  312
J  90.0% (36/40)    IGHJ4*02     9    --...T..............A....GG...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_222147

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           319     2e-89
IGHD2-2*01                                                                                            16.1    2.3  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCTTCCAAGAGA	GTAGTACTCCCAGC	CGGCAAG	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCTTCCAAGAGAGTAGTACTCCCAGCCGGCAAGATTACTACTCCTACTACCCTATGGACGTC	AAFQESSTPSRQDYYSYYPMDV	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	222	18	0	92.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  S  G  K  T  L  E 
                    Query_9176   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCTCAGGGAAAACACTGGAG  90
V  92.5% (222/240)  IGHV4-59*08  49   ...........................................G............................C.......GGG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  H  N  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  S  S  K  S 
                    Query_9176   91   TGGATTGGTCATATCCACAACAGTGGGAGCACCAACTACAACCCCTCCCTCCGGAGTCGAGTCACCATATCAGTGGACTCGTCCAAGAGC  180
V  92.5% (222/240)  IGHV4-59*08  139  ........GT.....T.TT................................AA.....................A...A.........A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  A  F  Q  E  S  S  T  P  S  R 
                    Query_9176   181  CAGTTCTCCCTGAGGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGGCCTTCCAAGAGAGTAGTACTCCCAGCCGG  270
V  92.5% (222/240)  IGHV4-59*08  229  .............A.C...............................G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  85.7% (12/14)    IGHD2-2*01   9    -------------------------------------------------------------------------......G.A.....---  22

                                      -IMGT--------------------------->                              
                                       Q  D  Y  Y  S  Y  Y  P  M  D  V  W  G  Q  G  T  S  V  T  V  S 
                    Query_9176   271  CAAGATTACTACTCCTACTACCCTATGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCC  333
J  93.2% (55/59)    IGHJ6*02     1    ----.........A.......GG.........................A..............  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_56304

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9177   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9177   91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_9177   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9177   271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_272819

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-16*02                                                                                           39.1    3e-07
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	CCAGGCCGG	TTACGTTTGGGGGCGTTATCGTT	TTTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCCAGGCCGGTTACGTTTGGGGGCGTTATCGTTTTTCCTACTTTGACTCC	ARGQAGYVWGRYRFSYFDS	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9178   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCATTCAGTGATTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGTCTGGAA  90
V  95.1% (233/245)  IGHV4-34*01  49   ...................................C.......G...........G...........................G.....G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  K  H  S  G  S  T  Y  S  N  P  S  L  K  S  R  V  T  T  S  V  D  T  S  K  N 
                    Query_9178   91   TGGATTGGGGAAATCAAGCATAGTGGAAGCACCTACTCCAACCCGTCCCTCAAGAGTCGAGTCACCACATCAGTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  .................T...............A...A.............................T......................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  Q  A  G  Y  V  W  G  R 
                    Query_9178   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGCGAGGCCAGGCCGGTTACGTTTGGGGGCGT  270
V  95.1% (233/245)  IGHV4-34*01  229  .............A......C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  95.7% (22/23)    IGHD3-16*02  10   --------------------------------------------------------------------------.............A..  25

                                      ----------------------->                                  
                                       Y  R  F  S  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9178   271  TATCGTTTTTCCTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.7% (22/23)    IGHD3-16*02  26   .......---------------------------------------------------  32
J  97.9% (46/47)    IGHJ4*02     2    -----------...........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_272818

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           308     4e-86
IGHD6-19*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              48.8    7e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGTGGC	CAGTGGC	CGGCGGAATATTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTGGCCAGTGGCCGGCGGAATATTGCTTTGACTTC	ARDGGQWPAEYCFDF	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	224	27	0	89.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  G  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9179   1    ACCCTGTCCCTCACCTGCAGTGTTTCTGGTGGCTCCATCAGCGGTAGCAGTTACTACTGGGGCTGGATCCGCCAGCCCCCCGGGAAGGGC  90
V  89.2% (224/251)  IGHV4-39*02  49   ...................C...C..................A....T................................A........G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  V  Y  Y  S  G  T  T  H  D  N  P  S  L  K  S  R  V  T  L  S  V  D  T  S 
                    Query_9179   91   CTAGAGTGGATTGGGAGTGTCTACTATAGTGGGACCACTCACGACAACCCGTCCCTCAAGAGTCGCGTCACCCTGTCCGTTGACACGTCC  180
V  89.2% (224/251)  IGHV4-39*02  139  ..G...............A....T..........G...CT..T......................A......A.A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  G  L  Y  F  C  A  R  D  G  G  Q  W  P  A 
                    Query_9179   181  AAGAACCAGTTCTCCCTGAGGCTGAACTCTGTCACCGCCGCAGACACGGGTCTATACTTTTGTGCGAGAGATGGTGGCCAGTGGCCGGCG  270
V  89.2% (224/251)  IGHV4-39*02  229  ........C..........A.....G......G................C.G.G..T.AC...........-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD6-19*01  9    ------------------------------------------------------------------------------.......-----  15

                                      ----------------->                              
                                       E  Y  C  F  D  F  W  G  Q  G  K  L  V  V  V  S 
                    Query_9179   271  GAATATTGCTTTGACTTCTGGGGCCAGGGAAAGCTGGTCGTCGTCTCC  318
J  87.5% (35/40)    IGHJ4*02     5    --------........A..............CC......AC.......  44


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_272817

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*02                                                                                            388     5e-110
IGHD3-9*01                                                                                            27.6    8e-04 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*02	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TTTTC	TTACGATATTTTGTCTG	CCAACACA	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTTTTCTTACGATATTTTGTCTGCCAACACAATGGACGTC	AFSYDILSANTMDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	267	19	0	93.4


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  L  T  G  Y
                    Query_9180  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTAAGGCTTCTGGATACAGCCTCACCGGCTA  90
V  93.4% (267/286)  IGHV1-2*02  6    ..................G.........................................C................C.T..........  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       S  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  V  N  S  G  A  T  N  Y  A  Q
                    Query_9180  91   CTCTGTGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATTAATGTTAACAGTGGCGCCACAAATTATGCGCA  180
V  93.4% (267/286)  IGHV1-2*02  96   ..A.A....................................................C..CCC.........T.G......C.....A..  185
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  R  G  G  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  T  S  D  D  T  A
                    Query_9180  181  GAAGTTTCGGGGCGGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCGTACATGGAGCTGAGCAGGCTGACATCTGACGACACGGC  270
V  93.4% (267/286)  IGHV1-2*02  186  ........A....A.....................................C......................G...............  275
                                       K  F  Q  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                     ------------><----------------CDR3-IMGT--------------->                                 
                                       V  Y  Y  C  A  F  S  Y  D  I  L  S  A  N  T  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9180  271  CGTCTATTACTGTGCGTTTTCTTACGATATTTTGTCTGCCAACACAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  358
V  93.4% (267/286)  IGHV1-2*02  276  ...G............------------------------------------------------------------------------  291
                                       V  Y  Y  C  A                                                                         
D  94.1% (16/17)    IGHD3-9*01  4    ---------------------.............A...--------------------------------------------------  20
J  100.0% (42/42)   IGHJ6*02    21   ----------------------------------------------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_272815

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            338     5e-95
IGHD6-6*01                                                                                            12.2    32   
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CAAG	TCGTCC	GAAATCGACA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACAAGTCGTCCGAAATCGACAACTTCTACGGTTTGGACGTC	AKDKSSEIDNFYGLDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  F  G  F  T  F  E  D  Y  A  M  H  W  V  R  Q  G  P  G  K  G  L  
                    Query_9181  1    GGTCCCTGAGACTCTCCTGTGCAGCCTTTGGATTCACGTTTGAAGATTATGCCATGCACTGGGTCCGGCAAGGTCCAGGGAAGGGCCTGG  90
V  93.2% (233/250)  IGHV3-9*01  47   ...........................C.........C.....T............................C.................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  G  I  S  W  N  G  Y  T  I  A  Y  A  D  S  V  K  G  R  F  T  L  S  R  D  N  A  
                    Query_9181  91   AATGGGTCTCAGGAATTAGTTGGAATGGTTATACCATAGCCTATGCGGACTCTGTGAAGGGCCGATTCACCCTCTCCAGAGACAACGCCA  180
V  93.2% (233/250)  IGHV3-9*01  137  .G...........T............A..GG..G.....G...............................A..................  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                     R  N  S  L  Y  L  Q  M  N  S  L  G  A  D  D  T  A  F  Y  Y  C  A  K  D  K  S  S  E  I  D  
                    Query_9181  181  GGAACTCCCTGTATCTGCAAATGAACAGTCTGGGAGCTGACGACACGGCCTTCTATTATTGTGCAAAAGACAAGTCGTCCGAAATCGACA  270
V  93.2% (233/250)  IGHV3-9*01  227  A...............................A.......G...........G.....C...........--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD6-6*01  13   --------------------------------------------------------------------------......----------  18

                                     T------------------>                                 
                                     N  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9181  271  ACTTCTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.2% (51/53)    IGHJ6*02    10   ...A.......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_272814

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         343     2e-96
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATCGTGGTG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATCGTGGTGACTACTTTGACCAC	ARGLHYYDRGDYFDH	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	249	234	15	0	94


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  V  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_9182     4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  94.0% (234/249)  IGHV4-30-4*01  50   .....TCC...A....CA............G.................A.........................................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  C  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_9182     94   TGGAGTGGATTGGGTGCATCTATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCA  183
V  94.0% (234/249)  IGHV4-30-4*01  140  ...............A........................C.................................................  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        K  N  Q  F  S  L  K  M  T  S  V  I  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R  
                    Query_9182     184  AGAACCAGTTCTCCCTGAAGATGACCTCTGTGATTGCCGCAGACACGGCCGTCTATTACTGTGCGAGAGGCCTCCATTACTATGATCGTG  273
V  94.0% (234/249)  IGHV4-30-4*01  230  ....................C...G........C..................G...........C....---------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01    3    ---------------------------------------------------------------------------...........A..A  17

                                        ---------------->                                  
                                        G  D  Y  F  D  H  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_9182     274  GTGACTACTTTGACCACTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  324
D  88.9% (16/18)    IGHD3-22*01    18   ...------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02       1    ---...........T....................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_272813

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           357     1e-100
IGHD5-12*01                                                                                           12.2    32    
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTATCGACTG	TACCATTAC	CCCCTGCCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTATCGACTGTACCATTACCCCCTGCCGTTTTGACTTC	ASLIDCTITPCRFDF	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  N  S  R  N  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9183   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAACAGTCGTAATTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.0% (238/248)  IGHV4-39*01  49   ..................A.....................G....A...G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  N  Y  S  G  T  T  Y  Y  T  A  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_9183   91   CTGGAGTGGATTGGGAGTATCAATTATAGTGGGACCACCTACTACACCGCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  96.0% (238/248)  IGHV4-39*01  139  .....................T............G...........A.C.........................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  I  D  C  T  I  T 
                    Query_9183   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGCCTTATCGACTGTACCATTACC  270
V  96.0% (238/248)  IGHV4-39*01  229  ...........................................................C........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  88.9% (8/9)      IGHD5-12*01  15   --------------------------------------------------------------------------------...G.....-  23

                                      ----------------->                                  
                                       P  C  R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9183   271  CCCTGCCGTTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  97.7% (42/43)    IGHJ4*02     6    ---------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_272812

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_9184   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_9184   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_9184   181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_9184   271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_272811

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           346     2e-97
IGHD3-9*01                                                                                            29.5    2e-04
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATCCAC	GTATAACGATGTTTTGACTGG	CCAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATCCACGTATAACGATGTTTTGACTGGCCATAACTGGTTCGACCCC	ARGSTYNDVLTGHNWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  L  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9185   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCATTCTCAGTAGTTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-48*03  47   ....................G...............CCT...................C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  V  R  G  T  T  I  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  H  A  
                    Query_9185   91   AGTGGGTTTCATACATTAGTGTTAGAGGTACTACCATATACTACGCAGACTCTGTGCAGGGCCGATTTACCATCTCTAGAGACCACGCCA  180
V  94.4% (235/249)  IGHV3-48*03  137  ....................AG...T....G.........................A..........C........C......A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      T  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  S  T  Y  N  D  V  
                    Query_9185   181  CGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGATCCACGTATAACGATGTTT  270
V  94.4% (235/249)  IGHV3-48*03  227  A....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD3-9*01   1    ----------------------------------------------------------------------------....T.....A...  14

                                      IMGT--------------------->                                  
                                      L  T  G  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9185   271  TGACTGGCCATAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  90.5% (19/21)    IGHD3-9*01   15   .......-----------------------------------------------------  21
J  100.0% (49/49)   IGHJ5*02     3    -----------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_272810

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           336     1e-94
IGHD1-20*01                                                                                           10.3    123  
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-20*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGCCCGAAAGAGAAGCC	TATAA	TAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGCCCGAAAGAGAAGCCTATAATAATGATGGTTTTGATATT	ARLPEREAYNNDGFDI	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  A  G  F  T  F  S  Y  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9186   1    GGTCCCTGAGACTCTCCTGTGCAGCCGCTGGATTCACCTTCAGTTACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-21*01  47   ..........................T.................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  S  R  T  D  F  I  Y  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  A  
                    Query_9186   91   AGTGGGTCGCATCCATTAGTTCTAGGACTGATTTCATATACTACGCAGACTCAGTGACGGGCCGATTCACCATCTCCAGAGACAACGCTA  180
V  93.5% (231/247)  IGHV3-21*01  137  ........T...........AG...T.G.AG..A.......................A..............................C.  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  F  L  Q  M  H  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  L  P  E  R  E  A  Y  
                    Query_9186   181  AGAACTCACTGTTTCTGCAAATGCACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGGCTGCCCGAAAGAGAAGCCTATA  270
V  93.5% (231/247)  IGHV3-21*01  227  ............A..........A............C..............................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD1-20*01  3    --------------------------------------------------------------------------------------....  6

                                      T------------------>                                  
                                      N  N  D  G  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9186   271  ATAATGATGGTTTTGATATTTGGGGCCAAGGGACAATGGTCACCGTCTCCTCAG  324
D  100.0% (5/5)     IGHD1-20*01  7    .-----------------------------------------------------  7
J  94.0% (47/50)    IGHJ3*02     1    ----.....C.........C.............................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_156111

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           364     5e-103
IGHD2-15*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGC	ATTGTAATGGT	AACAGGTGTTGGGG	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGCATTGTAATGGTAACAGGTGTTGGGGCGTC	ARDRHCNGNRCWGV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9187   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAACAACTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (240/247)  IGHV3-53*01  47   .............................................G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  I  Y  S  G  G  T  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  
                    Query_9187   91   AGTGGGTCTCACTTATTTATAGCGGTGGTACCACACACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGA  180
V  97.2% (240/247)  IGHV3-53*01  137  ...........G..................G....T...................................................A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  R  H  C  N  G  N  R  
                    Query_9187   181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGATAGGCATTGTAATGGTAACAGGT  270
V  97.2% (240/247)  IGHV3-53*01  227  .................................C.................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  90.9% (10/11)    IGHD2-15*01  6    ------------------------------------------------------------------------......G....-------  16

                                      ---------->                                 
                                      C  W  G  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9187   271  GTTGGGGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (37/37)   IGHJ6*02     26   -------.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_56305

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           10.3    116  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAGGTTTCGATA	GGGGG	G	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAGGTTTCGATAGGGGGGGGTTCGACCCC	ARDRGFDRGGFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9188   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A......A..............................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  Y  Y  S  G  S  I  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  M  P  K  N 
                    Query_9188   91   TGGATTGCGTATATCTATTACAGTGGGAGCATCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACATGCCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  .......G.......................C...C.....................................T.....C.T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  I  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  G  F  D  R  G  G  F 
                    Query_9188   181  CAGATCTCCCTGAAGTTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATAGAGGTTTCGATAGGGGGGGGTTC  270
V  95.1% (233/245)  IGHV4-59*01  229  ...T...........C................T................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -------------------------------------------------------------------------------.....------  22
J  100.0% (45/45)   IGHJ5*02     7    -------------------------------------------------------------------------------------.....  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9188   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (45/45)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_159551

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           277     9e-77
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ3*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AAACGAA	ACGTTTGG	AAGGGGGGCGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAAACGAAACGTTTGGAAGGGGGGCGCGTTTGATATC	ARKRNVWKGGAFDI	250	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	63	36	25	5	6	69.4
FR2-IMGT	64	114	51	47	4	0	92.2
CDR2-IMGT	115	135	21	16	5	0	76.2
FR3-IMGT	136	249	114	97	17	0	85.1
CDR3-IMGT (germline)	250	255	6	6	0	0	100
Total	N/A	N/A	255	218	31	6	85.5


Alignments

                                      <--------FR1-IMGT---------><-------------CDR1-IMGT------------><--------------------FR2-IM
                                       T  L  S  L  T  C  T  V  S  G  A  S  M  S  I  D  S  S  S  Y  C  W  A  W  I  R  Q  P  P  G 
                    Query_9189   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGCCTCCATGAGTATCGATAGTAGTAGTTACTGCTGGGCCTGGATCCGCCAGCCCCCAGGG  90
V  85.5% (218/255)  IGHV4-39*01  49   .............................T.G......C..C.------............A.....G......................  132
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S        S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  G  L  E  W  V  G  N  I  Y  H  T  G  V  T  Y  S  N  P  S  L  S  S  R  V  S  T  Y  I  D 
                    Query_9189   91   AAGGGGCTGGAGTGGGTTGGCAATATCTATCACACTGGGGTCACCTACTCCAATCCGTCCCTCAGCAGTCGAGTCAGCACATACATAGAT  180
V  85.5% (218/255)  IGHV4-39*01  133  ...............A....G.G.......T.T.G....AG........A...C..........AG..........C..T..C.G....C  222
                                       K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><----------------CDR3
                                       M  S  M  N  Q  F  S  L  G  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  K  R  N  V  W 
                    Query_9189   181  ATGTCCATGAACCAGTTTTCCCTGGGGCTGACCTCCGTGACCGCGGCAGACACGGCTGTGTATTACTGTGCGAGAAAACGAAACGTTTGG  270
V  85.5% (218/255)  IGHV4-39*01  223  .C.....A.........C......AA.....G...T........C..............................---------------  297
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  100.0% (8/8)     IGHD3-16*01  12   ----------------------------------------------------------------------------------........  19

                                      -IMGT--------------->                                  
                                       K  G  G  A  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9189   271  AAGGGGGGCGCGTTTGATATCTGGGGCCAAGGGACATTGGTCACCGTCTCTTCAG  325
J  97.7% (42/43)    IGHJ3*02     8    ------------........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_129009

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD2-2*02                                                                                            12.2    32    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCA	CTGGTATAC	TTACGTCAGCGGGGGATATG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTGGTATACTTACGTCAGCGGGGGATATGTTGACTAC	ARGHWYTYVSGGYVDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9190   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.2% (243/250)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  C  S  G  T  T  Y  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S 
                    Query_9190   91   CTGGAGTGGATTGGGTGCATCTATTGCAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGCTACCATATCAGTAGACACGTCT  180
V  97.2% (243/250)  IGHV4-31*03  139  ................A........A........G................................T......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  W  Y  T  Y  V 
                    Query_9190   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCACTGGTATACTTACGTC  270
V  97.2% (243/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (8/9)      IGHD2-2*02   22   --------------------------------------------------------------------------...C.....-------  30

                                      GT------------------>                                  
                                       S  G  G  Y  V  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_9190   271  AGCGGGGGATATGTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  325
J  97.6% (41/42)    IGHJ4*02     7    -------------.............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_129008

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	276	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_9191   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  96.5% (276/286)  IGHV5-51*01  6    ..................................................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_9191   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  96.5% (276/286)  IGHV5-51*01  96   ......................A.......G.............G..........................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_9191   181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAGCACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  96.5% (276/286)  IGHV5-51*01  186  ....................C...................A...........................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9191   271  CGTGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.5% (276/286)  IGHV5-51*01  276  .A..............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_129003

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            335     4e-94
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTAGTGACCC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTAGTGACCCCTGGTACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	230	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  V  G  S  I  T  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9192   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGTTGGCTCCATCACCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  93.5% (230/246)  IGHV4-4*01   49   ............................G...........G....................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  S  N 
                    Query_9192   91   GAGTGGATTGGGGAAATCTATCATGGTGGAGCCACCAACTACAACCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAC  180
V  93.5% (230/246)  IGHV4-4*01   139  ........................A....GAG......................A..................................G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  S  L  R  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_9192   181  AACCAGTTCTCCCTGAGTCTGAGGTCTCTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATCTAGTGACCCCTGGTACTCGG  270
V  93.5% (230/246)  IGHV4-4*01   229  ................AG.....C...G...........................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  E  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9192   271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.3% (41/43)    IGHJ4*02     6    ---.....C.A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_129002

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            391     6e-111
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_9193  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.1% (270/290)  IGHV1-8*02  6    ..................G..........................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_9193  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACGGGCTATGCACA  180
V  93.1% (270/290)  IGHV1-8*02  96   ........A.........................................................C...........A...........  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_9193  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.1% (270/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9193  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.1% (270/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_129005

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           330     1e-92
IGHD1-26*01                                                                                           12.2    35   
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TA	GAGCTA	ATCGGGGGCAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAGAGCTAATCGGGGGCAGTTTGACTAC	ASRANRGQFDY	290	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	289	120	99	15	6	82.5
CDR3-IMGT (germline)	290	294	5	5	0	0	100
Total	N/A	N/A	293	254	33	6	86.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  V  K  V  S  C  K  A  V  G  K  N  F  F  S  Y 
                    Query_9194   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGACTCAGTGAAGGTCTCCTGCAAGGCTGTTGGTAAAAACTTTTTCAGTTAT  91
V  86.7% (254/293)  IGHV1-18*01  7    ........................................C.........................TC....T.C.C....AC...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  I  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  S  I  N  A  Y  D  S  K  T  H  Y  A  Q 
                    Query_9194   92   GGTATCATCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCGTCGATCAACGCGTACGATAGTAAGACACACTATGCACAG  181
V  86.7% (254/293)  IGHV1-18*01  97   .......G.........................................GA.G.....G...T...A..G....C...A...........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      --------------------------------------------FR3-IMGT--------------------------------------
                                       K  F  L  G  R  V  S  L  S  T  D  T  D  L  S  T  S  T  P  Y  M  E  V  R  G  L  T  Y  D  D 
                    Query_9194   182  AAGTTCCTGGGCAGAGTCTCCTTGAGCACAGATACAGATCTCTCCACGAGCACGCCCTATATGGAGGTGAGGGGCCTGACATATGACGAC  271
V  86.7% (254/293)  IGHV1-18*01  187  ...C...A..........A..A...C......C...------...........AG....C......C.....A......G..C.......  270
                                       K  L  Q  G  R  V  T  M  T  T  D  T        S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------CDR3-IMGT----------->                                  
                                       T  A  V  Y  Y  C  A  S  R  A  N  R  G  Q  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_9194   272  ACGGCCGTCTATTACTGTGCGAGTAGAGCTAATCGGGGGCAGTTTGACTACTGGGGCCAGGGAACCCTGGTCAGCGTCTCCTCAG  356
V  86.7% (254/293)  IGHV1-18*01  271  ........G..............--------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                 
D  100.0% (6/6)     IGHD1-26*01  11   -------------------------......------------------------------------------------------  16
J  97.7% (42/43)    IGHJ4*02     6    ------------------------------------------...............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_129004

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         344     6e-97
IGHD3-9*01                                                                                            43.0    2e-08
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	CCCCGC	ATTACGATATTTTGACTGGTTA	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGCCCCGCATTACGATATTTTGACTGGTTATGACTAC	ARAPHYDILTGYDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  I  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_9195     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTATTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  94.0% (235/250)  IGHV4-30-4*01  49   ..................A..........................G..GA........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  N  N  E  N  T  Y  Y  N  P  S  L  E  S  R  L  I  I  S  V  D  T  S 
                    Query_9195     91   CTGGAGTGGATTGGATACATCTATAACAATGAGAACACCTACTACAACCCGTCCCTCGAGAGTCGACTTATCATATCAGTGGACACGTCC  180
V  94.0% (235/250)  IGHV4-30-4*01  139  ..............G.........T...G..G..G......................A........G...C.........A.........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  H  Y  D  I  L 
                    Query_9195     181  AAGAACCAGTTCTCCCTTAACCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGCCCCGCATTACGATATTTTG  270
V  94.0% (235/250)  IGHV4-30-4*01  229  .................G..G.................................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-9*01     3    ----------------------------------------------------------------------------..............  16

                                        -------------->                                  
                                         T  G  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9195     271  ACTGGTTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
D  100.0% (22/22)   IGHD3-9*01     17   ........-----------------------------------------  24
J  100.0% (41/41)   IGHJ4*02       8    --------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_129007

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           347     7e-98
IGHD7-27*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TAC	ACTGGGG	CCCCATCTGAGGAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATACACTGGGGCCCCATCTGAGGAATTTGACTGC	AKYTGAPSEEFDC	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  Y  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9196   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCTACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-23*01  47   ..........................................G.AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  V  S  R  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_9196   91   AGTGGGTCTCAACTATTAGTGGTAGTGTTAGTAGAACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  94.8% (235/248)  IGHV3-23*01  137  ...........G...............G.G....C....................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  M  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  Y  T  G  A  P  S  E  
                    Query_9196   181  AGAATACGATGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATACTACTGTGCGAAATACACTGGGGCCCCATCTGAGG  270
V  94.8% (235/248)  IGHV3-23*01  227  ....C...C.........................................G....T............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD7-27*01  4    -----------------------------------------------------------------------.......------------  10

                                      ---------->                                  
                                      E  F  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9196   271  AATTTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (42/43)    IGHJ4*02     6    --.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_129006

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           413     2e-117
IGHD6-25*01                                                                                           12.2    35    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TT	AGCGGC	GAAGGTAACCTTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTAGCGGCGAAGGTAACCTTATTGACTAC	AKLSGEGNLIDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  R  Y
                    Query_9197   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCAGGTA  90
V  95.5% (277/290)  IGHV5-51*01  6    ..................................................................T....................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  Y  D  V  R  Y  R  P
                    Query_9197   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTATGATGTGAGATACAGACC  180
V  95.5% (277/290)  IGHV5-51*01  96   .......................................................................C....ACC........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9197   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGCACCGCCTTTTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (277/290)  IGHV5-51*01  186  ...................................A.................ACC..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  K  L  S  G  E  G  N  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9197   271  CATTTATTACTGTGCGAAACTTAGCGGCGAAGGTAACCTTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.5% (277/290)  IGHV5-51*01  276  ...G.............G..---------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD6-25*01  10   ----------------------......-------------------------------------------------------  15
J  100.0% (42/42)   IGHJ4*02     7    -----------------------------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_326025

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           268     6e-74
IGHD2-2*01                                                                                            12.2    30   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GGGCCAGAGA	AGTAGGACC	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGAGGGCCAGAGAAGTAGGACCCTTGACTAC	ATEGQRSRTLDY	235	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	10	1	0	90.9
CDR1-IMGT	25	48	24	19	5	0	79.2
FR2-IMGT	49	99	51	47	4	0	92.2
CDR2-IMGT	100	120	21	17	4	0	81
FR3-IMGT	121	234	114	100	14	0	87.7
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	229	200	29	0	87.3


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  S  N  N  Y  M  S  W  V  R  Q  A  P  G  M  G  L  E  W  V  S  L  I  
                    Query_9198   14   GTGCAGTCTCTGGATTCACCTTCAGTAATAACTATATGAGTTGGGTCCGCCAGGCTCCAGGGATGGGGCTGGAGTGGGTCTCTCTTATTT  103
V  87.3% (200/229)  IGHV3-53*01  65   ......C......G......G......GC.....C.....C......................A..................AG......  154
                                         A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  

                                      --CDR2-IMGT-----><----------------------------------------------------FR3-IMGT------------
                                      Y  S  G  G  G  S  F  Y  T  H  S  V  E  G  R  F  T  I  S  R  D  D  Y  K  N  T  V  Y  L  Q  
                    Query_9198   104  ACAGCGGTGGTGGCTCCTTCTACACACACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACGATTACAAGAACACGGTTTATCTTCAAA  193
V  87.3% (200/229)  IGHV3-53*01  155  .T.........A..A.A.A....G..G........A..........................A...C..........C.G..........  244
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  

                                      ----------------------------------------><-------------CDR3-IMGT------------>             
                                      M  N  N  V  R  A  E  D  T  A  I  Y  Y  C  A  T  E  G  Q  R  S  R  T  L  D  Y  W  G  Q  G  
                    Query_9198   194  TGAACAATGTTAGAGCCGAGGACACGGCCATATATTACTGTGCGACAGAGGGCCAGAGAAGTAGGACCCTTGACTACTGGGGCCAGGGAG  283
V  87.3% (200/229)  IGHV3-53*01  245  ......GCC.G..................G.G.............G...-----------------------------------------  293
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                            
D  88.9% (8/9)      IGHD2-2*01   11   -----------------------------------------------------------.....T...----------------------  19
J  95.2% (40/42)    IGHJ4*02     7    ---------------------------------------------------------------------....................A  27

                                                           
                                      A  L  V  I  V  S  S  
                    Query_9198   284  CCCTGGTCATCGTCTCCTCAG  304
J  95.2% (40/42)    IGHJ4*02     28   .........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_126757

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           382     3e-108
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTA	ACGATTT	ACATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACGATTTACATTATGGTATGGACGTC	ARVNDLHYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9199   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATTCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (247/250)  IGHV4-31*01  49   ...................C................................................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 
                    Query_9199   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (247/250)  IGHV4-31*01  139  ..........................................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  D  L  H  Y  G 
                    Query_9199   181  AAGAACCAGCTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTTAACGATTTACATTATGGT  270
V  98.8% (247/250)  IGHV4-31*01  229  .........T............................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   6    -------------------------------------------------------------------------.......----------  12
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9199   271  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  312
J  100.0% (45/45)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_192732

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           310     1e-86
IGHD1-1*01                                                                                            12.2    34   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCAGGAT	GTACAA	GTGCCAGGTGATCTGCGGATA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAGATCAGGATGTACAAGTGCCAGGTGATCTGCGGATATACTTCTACGGTTTGGACGTC	AADQDVQVPGDLRIYFYGLDV	246	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	6	2	0	75
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  A  T  D  L  Y  Y  W  S  W  T  R  Q  P  P  G  K  G  
                    Query_9200   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCGTCGCCACTGATCTTTACTACTGGAGCTGGACCCGGCAGCCCCCAGGGAAGGGAC  93
V  89.6% (224/250)  IGHV4-61*01  50   .....TCC...A..........................AG..G..G.AG.................T.......................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  L  Y  Y  N  G  V  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  R  D  S  S  
                    Query_9200   94   TGGAGTGGATTGGATATCTCTATTACAATGGGGTCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAAGAGACTCGTCCA  183
V  89.6% (224/250)  IGHV4-61*01  140  .............G...A.........G....AG...........................................GT....A......  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  Q  F  S  L  K  M  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  A  D  Q  D  V  Q  V  P  
                    Query_9200   184  AGAACCAGTTCTCCCTGAAGATGAACTCTGTGACCGCTGCGGACTCGGCCGTATATTATTGTGCGGCAGATCAGGATGTACAAGTGCCAG  273
V  89.6% (224/250)  IGHV4-61*01  230  ....................C...G...................A.......G.....C......AG...--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-1*01   2    -----------------------------------------------------------------------------......-------  7

                                      DR3-IMGT-------------------------->                                 
                                      G  D  L  R  I  Y  F  Y  G  L  D  V  W  G  L  G  T  T  V  T  V  S  S 
                    Query_9200   274  GTGATCTGCGGATATACTTCTACGGTTTGGACGTCTGGGGCCTAGGGACCACGGTCACCGTCTCCTCA  341
J  94.4% (51/54)    IGHJ6*02     9    --------------....A.......A...............A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_267357

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            346     2e-97
IGHD1-26*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	G	AGTGGGA	TGGCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGAGTGGGATGGCTCCCTGACTAC	VGGVGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  I  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9201   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCATTAGTGACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-7*01   47   ....................................C.T.....AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  E  K  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9201   91   AGTGGGTGGCCAACATAGAGAAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-7*01   137  .................A..C.................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  L  Y  Y  C  V  G  G  V  G  W  L  P  D  
                    Query_9201   181  AGAACTCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTCTGTATTACTGTGTGGGAGGAGTGGGATGGCTCCCTGACT  270
V  94.4% (235/249)  IGHV3-7*01   227  ...................A...A............C.............G............C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  6    ----------------------------------------------------------------------.......-------------  12
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9201   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_116137

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           286     1e-79
IGHD6-19*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGGGCAAG	ATAGTAGTGGCTGG	GGCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGAAGGGCAAGATAGTAGTGGCTGGGGCTACTACTTTGACACC	VREGQDSSGWGYYFDT	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	217	34	0	86.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  V  N  S  G  F  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_9202   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGGTCCGTCAATAGTGGTTTTTATTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  86.5% (217/251)  IGHV4-61*01  49   ...................C............C.......GC......AG...C..C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  D  W  I  G  N  V  Y  A  T  G  R  T  K  L  K  S  S  L  T  S  R  V  S  M  S  V  D  K  A 
                    Query_9202   91   CTGGACTGGATTGGCAATGTCTATGCCACTGGGAGAACCAAATTGAAGTCCTCCCTCACGAGTCGAGTCAGCATGTCCGTAGACAAGGCC  180
V  86.5% (217/251)  IGHV4-61*01  139  .....G........GT..A.....TA..G......C.....C.AC..CC.........A...........C...A..A.......C.T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  L  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  V  R  E  G  Q  D  S  S  G 
                    Query_9202   181  AAGAACCTGTTCTCCCTGAAACTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTTTTGTGTGCGAGAAGGGCAAGATAGTAGTGGC  270
V  86.5% (217/251)  IGHV4-61*01  229  .......A............G....G................................AC....C.A....-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD6-19*01  5    -------------------------------------------------------------------------------....C......  15

                                      GT------------------>                                  
                                       W  G  Y  Y  F  D  T  W  G  P  G  T  L  V  T  V  S  S  
                    Query_9202   271  TGGGGCTACTACTTTGACACCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  325
D  92.9% (13/14)    IGHD6-19*01  16   ...----------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*02     1    -------...........TA........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_337522

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           257     1e-70
IGHD3-22*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGAATCCTCGATCT	CTATGATCATAGTG	CTCTAGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGACATGGAATCCTCGATCTCTATGATCATAGTGCTCTAGCCTACTTTGACTAC	ARHGILDLYDHSALAYFDY	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	18	6	0	75
FR2-IMGT	49	99	51	47	4	0	92.2
CDR2-IMGT	100	129	30	26	4	0	86.7
FR3-IMGT	130	243	114	92	22	0	80.7
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	238	201	37	0	84.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  R  I  S  G  S  T  M  H  W  V  R  L  A  S  G  K  G  L  E  W  V  G  R  I  
                    Query_9203   14   GTGCAGCCTCTGGGTTCAGGATCAGCGGCTCTACCATGCACTGGGTCCGCCTGGCTTCCGGAAAGGGGCTGGAGTGGGTTGGCCGGATCA  103
V  84.5% (201/238)  IGHV3-73*01  65   ..................CCT....T......G.T................A.........G..A....................T..T.  154
                                         A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  E  W  V  G  R  I  

                                      -------CDR2-IMGT---------><----------------------------------------------------FR3-IMGT---
                                      R  T  K  A  N  S  Y  A  T  Y  Y  A  V  S  V  K  D  R  F  T  I  S  R  D  D  S  K  N  T  V  
                    Query_9203   104  GAACGAAAGCCAACAGTTACGCGACATATTACGCTGTGTCGGTGAAGGACAGATTCACCATCTCCAGAGACGACTCCAAGAACACGGTTT  193
V  84.5% (201/238)  IGHV3-73*01  155  ...GC.....T...............GCA..T....C.........A.G...G.................T..T..A..........CG.  244
                                      R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  A  

                                      -------------------------------------------------><-----------------------CDR3-IMGT-------
                                      Y  L  H  M  N  S  L  G  A  D  D  T  A  I  Y  Y  C  A  R  H  G  I  L  D  L  Y  D  H  S  A  
                    Query_9203   194  ACCTGCACATGAACAGTCTGGGAGCCGACGACACGGCCATCTATTACTGTGCTAGACATGGAATCCTCGATCTCTATGATCATAGTGCTC  283
V  84.5% (201/238)  IGHV3-73*01  245  .T.....A........C...AA.A....G.........G.G.........A.......--------------------------------  302
                                      Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                                   
D  85.7% (12/14)    IGHD3-22*01  7    -------------------------------------------------------------------------.......AG.....---  20

                                      ---------------->                                  
                                      L  A  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9203   284  TAGCCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
J  100.0% (47/47)   IGHJ4*02     2    ----...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_337521

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD2-15*01                                                                                           16.1    2.3  
IGHJ5*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TCAGCAGGTTGGCTGCGTGACTCC	GCTACTCC	CCGTGTT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATCAGCAGGTTGGCTGCGTGACTCCGCTACTCCCCGTGTTAACTGGTTCGACCCC	AKSAGWLRDSATPRVNWFDP	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  A  G  F  A  F  G  T  Y  A  M  N  W  V  R  Q  A  P  G  T  G  L  
                    Query_9204   1    GGTCCCTGAGACTCTCCTGTGCAGCCGCTGGATTCGCCTTTGGCACCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGACGGGGCTGG  90
V  93.1% (231/248)  IGHV3-23*01  47   ..........................T........A.....A...G...........G.......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  D  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9204   91   AGTGGGTCTCAAGTATCAGTGGTAGTGGTGATGGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (231/248)  IGHV3-23*01  137  ...........GC...T.............G.A.........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  L  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  S  A  G  W  L  R  D  
                    Query_9204   181  AGAACACGCTACTCCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATTTATTACTGTGCGAAATCAGCAGGTTGGCTGCGTGACT  270
V  93.1% (231/248)  IGHV3-23*01  227  ..........GTAT....................................G.A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      R3-IMGT------------------------>                                  
                                      S  A  T  P  R  V  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9204   271  CCGCTACTCCCCGTGTTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  100.0% (8/8)     IGHD2-15*01  24   --........--------------------------------------------------------  31
J  100.0% (49/49)   IGHJ5*02     3    -----------------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_116134

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            420     7e-120
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	274	5	0	98.2


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_9205  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  98.2% (274/279)  IGHV6-1*01  26   ...........................................................G......G....AG.................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_9205  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.2% (274/279)  IGHV6-1*01  116  ..........................................................................................  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_9205  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.2% (274/279)  IGHV6-1*01  206  ..............A...........................................................................  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------CDR3-IMGT--------->                                  
                                     C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9205  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  98.2% (274/279)  IGHV6-1*01  296  .........---------------------------------------------------------  304
                                     C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02    4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_116133

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            403     9e-115
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	269	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	154	27	27	0	0	100
FR3-IMGT	155	268	114	113	1	0	99.1
CDR3-IMGT (germline)	269	275	7	7	0	0	100
Total	N/A	N/A	274	266	8	0	97.1


Alignments

                                     <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                      L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  I  R 
                    Query_9206  2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGATCAGG  91
V  97.1% (266/274)  IGHV6-1*01  31   ........G...T.G.......................................G......G....AG......................  120
                                      L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                     ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                      Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 
                    Query_9206  92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGA  181
V  97.1% (266/274)  IGHV6-1*01  121  ..........................................................................................  210
                                      Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                     --------------------------FR3-IMGT----------------------------------------------------><--
                                      I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_9206  182  ATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCA  271
V  97.1% (266/274)  IGHV6-1*01  211  .........A................................................................................  300
                                      I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                     --------CDR3-IMGT--------->                                  
                                      R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9206  272  AGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  332
V  97.1% (266/274)  IGHV6-1*01  301  ....---------------------------------------------------------  304
                                      R                                                           
J  97.9% (46/47)    IGHJ3*02    4    --------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_337526

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           361     4e-102
IGHD6-13*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTAG	CGCCATAG	TAGCAGCAGCTGGTAC	ACTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGCGCCATAGTAGCAGCAGCTGGTACACTATTTGACTAC	TSAIVAAAGTLFDY	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	242	11	0	95.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  T  F  S  G  S  V  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_9207   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGGTCACCTTCAGTGGCTCTGTTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  95.7% (242/253)  IGHV3-73*01  47   .........A......................T..................C......................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  S  K  A  N  N  Y  A  T  A  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_9207   91   AGTGGGTTGGCCGTATTAGAAGCAAAGCTAACAATTACGCGACGGCGTATGCTGCGCCGGTGAAGGGCAGGTTCACCATCTCCAGAGATG  180
V  95.7% (242/253)  IGHV3-73*01  137  .................................G.........A..A.........T.......A.........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  E  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  M  Y  Y  C  T  S  A  I  V  A  A  
                    Query_9207   181  ATTCAGAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAAGACACGGCCATGTATTACTGTACTAGCGCCATAGTAGCAGCAG  270
V  95.7% (242/253)  IGHV3-73*01  227  .....A........................................G.........G................-----------------  299
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (16/16)   IGHD6-13*01  6    ---------------------------------------------------------------------------------.........  14

                                      IMGT--------------->                                  
                                      A  G  T  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9207   271  CTGGTACACTATTTGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (16/16)   IGHD6-13*01  15   .......-----------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------....................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_116131

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           361     4e-102
IGHD3-22*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GTTAGCGGG	GATAGTAG	CATCTAGTGCAGTTAGAGCGGACTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTTAGCGGGGATAGTAGCATCTAGTGCAGTTAGAGCGGACTTT	AKLAGIVASSAVRADF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	239	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9208   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (239/247)  IGHV3-23*01  47   ...........................................C.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  V  S  G  S  G  G  A  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9208   91   AGTGGGTCTCAGCTGTCAGTGGTAGTGGTGGTGCCACATTCTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.8% (239/247)  IGHV3-23*01  137  ..............A.T...............AG.....A..................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  L  A  G  I  V  A  S  
                    Query_9208   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAAGTTAGCGGGGATAGTAGCATCTA  270
V  96.8% (239/247)  IGHV3-23*01  227  .........................................................A.........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD3-22*01  11   ----------------------------------------------------------------------------........------  18

                                      T------------------>                                  
                                      S  A  V  R  A  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9208   271  GTGCAGTTAGAGCGGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (34/34)   IGHJ4*02     15   --------------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_116130

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD3-16*01                                                                                           12.2    33   
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GCCGCGAAAATCGGTCTTTGGACTACTTATCCC	TGGGGG	GGGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCCGCGAAAATCGGTCTTTGGACTACTTATCCCTGGGGGGGGGCGACTGGTTCGACCCC	ARGPRKSVFGLLIPGGGRLVRP	238	304	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9209   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCGATTACCATTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  94.7% (232/245)  IGHV4-34*01  49   .......................................AG.GGTT.C..........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  G  A  T  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9209   91   TGGATTGGGGAAATCAATCATGGTGCAACGACCAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-34*01  139  .....................A...G..GC............C...............................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  K  S  V  F  G  L 
                    Query_9209   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGCCGCGAAAATCGGTCTTTGGACTA  270
V  94.7% (232/245)  IGHV4-34*01  229  ....................C............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      -IMGT---------------------------->                                  
                                       L  I  P  G  G  G  R  L  V  R  P  L  G  P  G  N  P  D  H  R  L  L   
                    Query_9209   271  CTTATCCCTGGGGGGGGGCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  338
D  100.0% (6/6)     IGHD3-16*01  17   --------......------------------------------------------------------  22
J  97.9% (47/48)    IGHJ5*02     4    --------------------................................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_28917

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           332     3e-93
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGCCTG	ATGGTTCGGGGAGCTATT	TGGAGGGGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGCCTGATGGTTCGGGGAGCTATTTGGAGGGGTTACTTTGACTAC	ARLMVRGAIWRGYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	229	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  F  S  S  S  N  F  Y  W  G  W  I  R  Q  A  P  G  K  G 
                    Query_9210   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCTTCAGCAGTAGTAACTTCTACTGGGGCTGGATCCGCCAGGCCCCAGGGAAGGGA  90
V  93.1% (229/246)  IGHV4-39*01  49   ...................C................A............GT.A......................C.............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  W  Y  S  G  R  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9210   91   CTAGAGTGGATTGGGAATATCTGGTATAGTGGGAGGACTAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  93.1% (229/246)  IGHV4-39*01  139  ..G.............G.....AT...........C..CT........C.........................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  V  R  G  A  I 
                    Query_9210   181  AAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGCGCCTGATGGTTCGGGGAGCTATT  270
V  93.1% (229/246)  IGHV4-39*01  229  .....................C...............................G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  94.4% (17/18)    IGHD3-10*01  9    ------------------------------------------------------------------------.............T....  26

                                      GT------------------>                                  
                                       W  R  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9210   271  TGGAGGGGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (46/46)   IGHJ4*02     3    ---------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_337529

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           357     1e-100
IGHD2-15*01                                                                                           12.2    31    
IGHJ1*01                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAACAGGGG	GGTGGT	N/A	TTCCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAACAGGGGGGTGGTTTCCACCAC	AKDKQGGGFHH	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  P  P  G  K  G  P  
                    Query_9211   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCCGG  90
V  95.6% (239/250)  IGHV3-30*18  47   .......................................................................G...............T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  L  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9211   91   AGTCGCTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.6% (239/250)  IGHV3-30*18  137  ...G.G....................................................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  S  G  L  R  S  D  D  T  A  V  Y  Y  C  A  K  D  K  Q  G  G  G  F  
                    Query_9211   181  AGAACACGCTGTTTCTGCAAATGAGCGGCCTGAGAAGTGACGACACGGCTGTTTATTACTGTGCGAAAGATAAACAGGGGGGTGGTTTCC  270
V  95.6% (239/250)  IGHV3-30*18  227  ............A...........A.A........GC...G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-15*01  14   --------------------------------------------------------------------------------......----  19
J  95.3% (41/43)    IGHJ1*01     10   --------------------------------------------------------------------------------------....  13

                                      ---->                                  
                                      H  H  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_9211   271  ACCACTGGGGCCAGGGCACCCTGGTCATCGTCTCCTCAG  309
J  95.3% (41/43)    IGHJ1*01     14   .G.........................C...........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_337528

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         346     2e-97
IGHD3-10*01                                                                                           10.3    116  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GA	GGGGA	CAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAGGGGACATTATGGACGTC	ARGGDIMDV	246	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_9212     4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGCC  93
V  94.4% (235/249)  IGHV4-30-2*01  50   .....TCC...A..............................................................................  139
                                           L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  H  H  S  G  L  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  R  S  
                    Query_9212     94   TGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACAGGTCCA  183
V  94.4% (235/249)  IGHV4-30-2*01  140  .............G......T...........AG..C.T...A......................G........................  229
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  

                                        -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                        K  N  Q  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  D  I  M  D  V  
                    Query_9212     184  AGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAGGGGACATTATGGACGTCT  273
V  94.4% (235/249)  IGHV4-30-2*01  230  ..........C.......A..................................................---------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01    16   -----------------------------------------------------------------------.....--------------  20
J  100.0% (43/43)   IGHJ6*02       20   -------------------------------------------------------------------------------...........  30

                                                                        
                                        W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9212     274  GGGGCCAAGGGACCACGGTCACCGTCTCCTCA  305
J  100.0% (43/43)   IGHJ6*02       31   ................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_17233

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*06                                                                                           282     4e-78
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*06	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	TTCCACCCGAAAA	TATGACAGTAGTGATTATT	CCTCCCACCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCACCCGAAAATATGACAGTAGTGATTATTCCTCCCACCTCTTTGACTAC	STRKYDSSDYSSHLFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	242	113	99	14	0	87.6
Total	N/A	N/A	242	211	31	0	87.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G 
                    Query_9213   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  87.2% (211/242)  IGHV4-31*06  49   ...................C................A...G.A....T.G..A...C....G.............CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  Y  I  Y  H  V  E  S  T  S  R  N  P  S  L  K  S  Q  L  T  I  S  L  D  P  S 
                    Query_9213   91   CTGGAGTGGATGGGATACATCTATCACGTTGAGAGCACCTCCCGCAACCCGTCCCTCAAGAGTCAACTTACCATTTCACTCGACCCGTCT  180
V  87.2% (211/242)  IGHV4-31*06  139  ...........T..G.........T..AG..G........A.TA....................G.G.......A...G.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  S  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  S  T  R  K  Y  D  S  S  D 
                    Query_9213   181  AAGAGCCAGTTCTCCCTAAAACTGACCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGTTCCACCCGAAAATATGACAGTAGTGAT  270
V  87.2% (211/242)  IGHV4-31*06  229  ....A............G..G....G....G...............................----------------------------  290
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y                               
D  89.5% (17/19)    IGHD3-22*01  8    ---------------------------------------------------------------------------.....T.......G.  22

                                      MGT-------------------->                                  
                                       Y  S  S  H  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9213   271  TATTCCTCCCACCTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  89.5% (17/19)    IGHD3-22*01  23   ....------------------------------------------------------  26
J  100.0% (44/44)   IGHJ4*02     5    --------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_116138

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           339     2e-95
IGHD1-26*01                                                                                           12.2    32   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGTCAGGGACGACATG	GTGGGA	CCTTAGGTCGCAT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGTCAGGGACGACATGGTGGGACCTTAGGTCGCATTTTGCCTAC	VSGTTWWDLRSHFAY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9214   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGCCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.7% (230/243)  IGHV3-30*03  47   ..............................................C....G...G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  P  E  G  R  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9214   91   AGTGGGTGGCAGTCATATCACCTGAGGGAAGAAATAAGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.7% (230/243)  IGHV3-30*03  137  .............T......TA...T.....T.....A....................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  V  Q  M  N  S  L  K  P  E  D  T  A  V  Y  Y  C  V  S  G  T  T  W  W  D  L  
                    Query_9214   181  AGAACACGCTGTACGTGCAAATGAACAGCCTGAAACCTGAGGACACGGCTGTGTATTACTGTGTGTCAGGGACGACATGGTGGGACCTTA  270
V  94.7% (230/243)  IGHV3-30*03  227  .............TC..................G.G...........................---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (6/6)     IGHD1-26*01  7    -------------------------------------------------------------------------------......-----  12

                                      ---------------->                                
                                      R  S  H  F  A  Y  W  G  Q  G  S  L  V  T  V  S  S
                    Query_9214   271  GGTCGCATTTTGCCTACTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTC  319
J  95.1% (39/41)    IGHJ4*02     6    --------....A.................C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_17232

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           330     9e-93
IGHD3-16*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TTTGGGTTT	GTTTGGG	ACTAAATTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTTTGGGTTTGTTTGGGACTAAATTCGAC	ASLGLFGTKFD	232	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	10	1	0	90.9
CDR1-IMGT	19	42	24	21	3	0	87.5
FR2-IMGT	43	93	51	51	0	0	100
CDR2-IMGT	94	117	24	21	3	0	87.5
FR3-IMGT	118	231	114	112	2	0	98.2
CDR3-IMGT (germline)	232	236	5	5	0	0	100
Total	N/A	N/A	229	220	9	0	96.1


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  L  S  G  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  
                    Query_9215   8    GTGCAGTCTCTGGATTCACCCTCAGTGGTTATGAGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTA  97
V  96.1% (220/229)  IGHV3-48*03  65   ......C.............T.....A.......A.......................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  N  G  V  T  I  Y  Y  A  H  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_9215   98   GTAGTAATGGTGTTACCATATATTACGCACACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGC  187
V  96.1% (220/229)  IGHV3-48*03  155  ......G....AG.........C......G............................................................  244
                                      S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-----------CDR3-IMGT----------->             
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  L  G  L  F  G  T  K  F  D  W  G  Q  G  
                    Query_9215   188  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGTTTGGGTTTGTTTGGGACTAAATTCGACTGGGGCCAGGGAA  277
V  96.1% (220/229)  IGHV3-48*03  245  .................................................-----------------------------------------  293
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (7/7)     IGHD3-16*01  14   ----------------------------------------------------------.......-------------------------  20
J  100.0% (36/36)   IGHJ4*02     13   ---------------------------------------------------------------------------...............  27

                                                           
                                      T  L  V  T  V  S  S  
                    Query_9215   278  CCCTGGTCACCGTCTCCTCAG  298
J  100.0% (36/36)   IGHJ4*02     28   .....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_200386

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD5-18*01                                                                                           14.1    8.1   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGTCATGGTT	CCGGAGGAA	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGTCATGGTTCCGGAGGAATTGGCTAC	ARYSHGSGGIGY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	235	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_9216   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (235/243)  IGHV4-59*01  49   ...............................G........G...................A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  S  T  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  K  N 
                    Query_9216   91   TGGATTGGGTATATCTACTACCGTGGGAGCACCAACTCCAACCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAAGAAC  180
V  96.7% (235/243)  IGHV4-59*01  139  .................T...A...............A......................G.............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  S  G  G  I  G 
                    Query_9216   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGTCATGGTTCCGGAGGAATTGGC  270
V  96.7% (235/243)  IGHV4-59*01  229  .............A.................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (11/13)    IGHD5-18*01  6    ---------------------------------------------------------------.....CT......--------------  18
J  95.2% (40/42)    IGHJ4*02     7    -------------------------------------------------------------------------------------...A.  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_9216   271  TACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  307
J  95.2% (40/42)    IGHJ4*02     12   ........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_200387

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  H
                    Query_9217   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATCA  90
V  92.4% (268/290)  IGHV5-51*01  6    ....................C........A.....................G.........A......C.........C.......GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  P
                    Query_9217   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCCC  180
V  92.4% (268/290)  IGHV5-51*01  96   ...................................................G.......A.....G.......G....C.....C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  A
                    Query_9217   181  GTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCGC  270
V  92.4% (268/290)  IGHV5-51*01  186  ...............G........C...................................G.......G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_9217   271  CTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  350
V  92.4% (268/290)  IGHV5-51*01  276  .A.......C.....G....------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    -----------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_200384

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           394     7e-112
IGHD1-26*01                                                                                           10.3    133   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AGAGGAGGGC	CTACT	GCGA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGAAGAGGAGGGCCTACTGCGAGGTATGGACGTC	AKEEEGLLRGMDV	283	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	69	69	67	2	0	97.1
CDR1-IMGT	70	93	24	20	4	0	83.3
FR2-IMGT	94	144	51	49	2	0	96.1
CDR2-IMGT	145	168	24	22	2	0	91.7
FR3-IMGT	169	282	114	107	7	0	93.9
CDR3-IMGT (germline)	283	290	8	6	2	0	75
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  D  N 
                    Query_9218   1    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGGCACCTTCAGCGACAAT  90
V  93.4% (271/290)  IGHV1-69*06  7    .................G...............................................T..................AG.T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       T  L  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  Y  G  T  A  N  Y  A  Q 
                    Query_9218   91   ACTCTCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTATGGAACAGCAAATTACGCACAG  180
V  93.4% (271/290)  IGHV1-69*06  97   G..A...G...........................................................T...T........C.........  186
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  F  T  A  D  K  S  T  S  T  A  Y  M  E  M  S  S  L  R  S  E  D  T  A 
                    Query_9218   181  AAGTTCCAGGGCAGAGTCACCTTTACCGCGGACAAGTCCACGAGCACAGCCTACATGGAGATGAGCAGCCTGAGATCTGAAGACACGGCC  270
V  93.4% (271/290)  IGHV1-69*06  187  ....................GA.............A........................C...................G.........  276
                                       K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><--------------CDR3-IMGT-------------->                                 
                                       V  Y  Y  C  A  K  E  E  E  G  L  L  R  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9218   271  GTATATTACTGTGCCAAAGAAGAGGAGGGCCTACTGCGAGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTTTCCTCA  354
V  93.4% (271/290)  IGHV1-69*06  277  ..G...........G.G...----------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD1-26*01  14   ------------------------------.....-------------------------------------------------  18
J  97.8% (44/45)    IGHJ6*02     18   ---------------------------------------......................................C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_200385

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           433     1e-123
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_9219   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  97.9% (283/289)  IGHV5-51*01  6    .............................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_9219   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  97.9% (283/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  S  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9219   181  GTCCTTCCAAAGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (283/289)  IGHV5-51*01  186  ..........G..................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9219   271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  97.9% (283/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_9219   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_200382

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHD1-26*01                                                                                           18.0    0.56  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	AGCA	AGTGGGAGC	CTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAAGCAAGTGGGAGCCTTATGACTCC	ARSKWEPYDS	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9220   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGTACCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.4% (239/248)  IGHV3-74*01  47   ....................................C........G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  K  S  D  G  S  S  G  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9220   91   TGTGGGTCTCACGTATTAAAAGTGATGGGAGTAGCGGAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (239/248)  IGHV3-74*01  137  ...................T...............AC..G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  H  M  N  N  L  R  A  E  D  T  A  L  Y  Y  C  A  R  S  K  W  E  P  Y  D  
                    Query_9220   181  AGAACACGCTGTATCTGCACATGAACAATCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCAAGAAGCAAGTGGGAGCCTTATGACT  270
V  96.4% (239/248)  IGHV3-74*01  227  ...................A.......G......................G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD1-26*01  6    ------------------------------------------------------------------------.........---------  14
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9220   271  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_200383

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         333     1e-93
IGHD3-10*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-10*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGCTCGGC	GGTTCGGGGAGTTA	CC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTCGGCGGTTCGGGGAGTTACCACTAC	ARGLGGSGSYHY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  V  S  G  V  A  F  S  S  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9221     1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGAGTCGCCTTCAGCAGCTATGCTATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.1% (230/247)  IGHV3-30-3*01  47   ........................C.......T..A.......T...........G..................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  L  I  S  H  D  G  S  S  K  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9221     91   AGTGGGTGGCACTTATATCACATGATGGAAGCAGTAAATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (230/247)  IGHV3-30-3*01  137  ...........G........T............A........A...............................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                        K  N  T  V  Y  L  *  M  N  S  L  R  N  E  D  T  A  V  Y  Y  C  A  R  G  L  G  G  S  G  S  
                    Query_9221     181  AGAACACGGTATATCTATAGATGAACAGCCTGAGAAATGAGGACACGGCTGTTTATTACTGTGCGAGGGGGCTCGGCGGTTCGGGGAGTT  270
V  93.1% (230/247)  IGHV3-30-3*01  227  ........C.G.....GC.A...............GC...............G..............-----------------------  293
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (14/14)   IGHD3-10*01    11   -----------------------------------------------------------------------------.............  23

                                        ------->                                
                                        Y  H  Y  W  G  Q  G  T  L  V  A  V  S  S
                    Query_9221     271  ACCACTACTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  310
D  100.0% (14/14)   IGHD3-10*01    24   .---------------------------------------  24
J  97.3% (36/37)    IGHJ4*02       10   ---..........................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_17067

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           343     2e-96
IGHD3-10*01                                                                                           12.2    32   
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GAGCCGACCCTAGTGAATCTTA	ATTATA	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAGCCGACCCTAGTGAATCTTAATTATAACTGGTGCTTCGATCTC	AEPTLVNLNYNWCFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9222   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.7% (232/245)  IGHV3-23*01  47   ............................T.............................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  R  G  D  R  T  F  Y  A  D  S  G  K  G  R  F  T  I  S  R  D  N  Y  
                    Query_9222   91   AGTGGGTCTCAGCTATTAGCGGTCGTGGTGATAGAACATTTTACGCAGACTCCGGGAAGGGCCGGTTCACCATCTCCAGAGACAATTACA  180
V  94.7% (232/245)  IGHV3-23*01  137  ...................T...A......G...C....AC.............T................................C..  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  Q  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  P  T  L  V  N  L  N  
                    Query_9222   181  AGAACACGCTGTATCAGCAGATGAACAGCCTGAGAGCCGAGGACACGGCGGTCTATTACTGTGCGGAGCCGACCCTAGTGAATCTTAATT  270
V  94.7% (232/245)  IGHV3-23*01  227  ...............T...A.............................C..A............-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-10*01  24   ---------------------------------------------------------------------------------------...  26

                                      T------------------>                                  
                                      Y  N  W  C  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9222   271  ATAACTGGTGCTTCGATCTCTGGGGCCGTGGGACCCTGGTCACTGTCTCCTCAG  324
D  100.0% (6/6)     IGHD3-10*01  27   ...---------------------------------------------------  29
J  96.1% (49/51)    IGHJ2*01     3    ---......A.....................C......................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_200388

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           330     1e-92
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGCCGG	TGGTTCGGGGAGTTATTA	CAGAGGA	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGCCGGTGGTTCGGGGAGTTATTACAGAGGATTCGACCCC	ARDAGGSGSYYRGFDP	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	231	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9223   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGTTCCATCAGCAGCGGTTCTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  92.0% (231/251)  IGHV4-31*03  49   ................................C...........T...GG............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  P  S  Y  Y  N  P  S  L  R  S  R  L  A  I  S  V  D  T  S 
                    Query_9223   91   CTGGAGTGGATTGGGTACATCCATCACAGTGGGCCCAGCTACTACAACCCGTCCCTCAGGAGTCGACTTGCGATATCAGTAGACACGTCT  180
V  92.0% (231/251)  IGHV4-31*03  139  .....................T..T........AG..C....................A.......G..A.C..................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  E  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  A  G  G  S  G  S 
                    Query_9223   181  AAGAATGAACTCTCCCTGAAGCTGACCTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGAGACGCCGGTGGTTCGGGGAGT  270
V  92.0% (231/251)  IGHV4-31*03  229  .....CC.GT...............G..............................T..............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (18/18)   IGHD3-10*01  10   -----------------------------------------------------------------------------.............  22

                                      GT------------------>                                  
                                       Y  Y  R  G  F  D  P  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_9223   271  TATTACAGAGGATTCGACCCCTGGGGTCAGGGAGTCCTGGTCACCGTCTCCTCAG  325
D  100.0% (18/18)   IGHD3-10*01  23   .....--------------------------------------------------  27
J  93.0% (40/43)    IGHJ5*02     9    ------------..............C......AC....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_117804

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAAG	GGGATAA	CTATAGTTAC	GAATCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACAAGGGGATAACTATAGTTACGAATCT	AQGDNYSYES	239	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	48	3	0	94.1
CDR2-IMGT	101	124	24	20	4	0	83.3
FR3-IMGT	125	238	114	110	4	0	96.5
CDR3-IMGT (germline)	239	245	7	5	2	0	71.4
Total	N/A	N/A	232	217	15	0	93.5


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  T  Y  A  M  N  W  V  R  Q  A  P  G  R  G  L  E  W  V  S  T  I 
                    Query_9224   14   TGTGCAGCCTCTGGCTTCACCTTTAGCACCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGGAGTGGGTCTCAACTATT  103
V  93.5% (217/232)  IGHV3-23*01  64   ..............A.............G...........G.......................A...................G.....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  S  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  Y  K  N  T  L  Y  L 
                    Query_9224   104  AGTGGGAGTGGTAGTAATACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTACAAGAACACGCTGTATCTG  193
V  93.5% (217/232)  IGHV3-23*01  154  .....T......G...GC....................................................C...................  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><----------CDR3-IMGT--------->               
                                       Q  M  N  S  L  R  A  G  D  T  A  L  Y  Y  C  A  Q  G  D  N  Y  S  Y  E  S  W  G  R  G  T 
                    Query_9224   194  CAGATGAACAGCCTGAGAGCCGGGGACACGGCCCTATATTACTGTGCACAAGGGGATAACTATAGTTACGAATCTTGGGGCCGGGGAACC  283
V  93.5% (217/232)  IGHV3-23*01  244  ..A...................A..........G.............GA...--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  90.0% (9/10)     IGHD5-18*01  11   -----------------------------------------------------------....G.....---------------------  20
J  97.1% (33/34)    IGHJ4*02     15   ---------------------------------------------------------------------------.......A.......  29

                                                         
                                       L  V  T  V  S  S  
                    Query_9224   284  CTGGTCACCGTCTCCTCAG  302
J  97.1% (33/34)    IGHJ4*02     30   ...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_40329

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           339     2e-95
IGHD6-13*01                                                                                           21.8    0.041
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  L  S  G  G  S  I  S  S  G  G  F  Y  W  N  W  I  R  Q  H  P  G  K  G  
                    Query_9225   4    CCCTGAGACTCTCCTGTACTCTCTCTGGTGGCTCCATCAGCAGTGGTGGTTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  93.6% (233/249)  IGHV4-31*02  50   .....TCC...A........G..............................A........G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  H  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  
                    Query_9225   94   TGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCTA  183
V  93.6% (233/249)  IGHV4-31*02  140  ....................T..................A.................................A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  R  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V  
                    Query_9225   184  AGAACCGATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTAG  273
V  93.6% (233/249)  IGHV4-31*02  230  ......AG..........A.....GC...............................A...........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  11   -----------------------------------------------------------------------...........--------  21

                                      ---------------->                                  
                                      G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9225   274  GCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
J  98.0% (48/49)    IGHJ3*01     2    --.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_56301

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           375     3e-106
IGHD4-4*01                                                                                            19.9    0.17  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATCAGC	CAGTAACTAC	TCTCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCAGCCAGTAACTACTCTCGGCTAC	ARNQPVTTLGY	287	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	172	21	15	6	0	71.4
FR3-IMGT	173	286	114	104	10	0	91.2
CDR3-IMGT (germline)	287	292	6	6	0	0	100
Total	N/A	N/A	290	265	25	0	91.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  V  T  V  S  
                    Query_9226   3    AGATGCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGGTCACCGTCAGTA  92
V  91.4% (265/290)  IGHV3-53*01  2    ..G...........G..............................................................T............  91
                                         V  Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  

                                      T------><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------
                                      N  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  L  S  V  M  Y  S  R  G  A  T  R  Y  A  
                    Query_9226   93   ACAACTATATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGCTCTCAGTCATGTATAGTCGTGGAGCCACAAGGTACGCAG  182
V  91.4% (265/290)  IGHV3-53*01  92   G......C....GC....................................G.......T..T.....CG....TAG....TAC.......  181
                                      S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      D  S  V  R  G  R  F  T  I  S  R  D  S  S  K  N  T  V  Y  L  Q  M  K  N  L  R  V  E  D  T  
                    Query_9226   183  ACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGAACACGGTGTATCTTCAAATGAAAAACCTGAGAGTCGAGGACACGG  272
V  91.4% (265/290)  IGHV3-53*01  182  .........A..........................A.............C................C.G........C...........  271
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  

                                      -------------><-----------CDR3-IMGT----------->                                  
                                      A  V  Y  Y  C  A  R  N  Q  P  V  T  T  L  G  Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_9226   273  CCGTCTATTACTGTGCGAGAAATCAGCCAGTAACTACTCTCGGCTACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  353
V  91.4% (265/290)  IGHV3-53*01  272  ....G...............-------------------------------------------------------------  291
                                      A  V  Y  Y  C  A  R                                                              
D  100.0% (10/10)   IGHD4-4*01   7    ---------------------------..........--------------------------------------------  16
J  97.4% (37/38)    IGHJ4*02     11   -------------------------------------------...........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_315158

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           263     2e-72
IGHD3-10*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTTAGCATGGAC	TGGTACGGGGAGT	CGAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTTAGCATGGACTGGTACGGGGAGTCGACCTACTACTACTACGGGATAGATGTC	ARLSMDWYGESTYYYYGIDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	205	37	0	84.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  M  N  R  H  Y  W  S  W  I  R  Q  P  P  G  G  G  L  E 
                    Query_9227   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGCGGCTCCATGAATAGGCACTATTGGAGTTGGATTCGACAGCCCCCGGGAGGGGGACTGGAG  90
V  84.7% (205/242)  IGHV4-59*08  49   ...................C.........T........C.G...TT....C.....C.....C..G........A..GAA..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  S  F  I  Y  Y  S  G  T  T  K  S  N  P  S  L  E  R  R  V  S  I  S  V  D  T  T  R  N 
                    Query_9227   91   TGGATTTCGTTCATCTACTACAGTGGGACTACCAAGTCCAACCCCTCCCTCGAGAGGCGCGTCTCCATATCAGTGGACACGACCAGGAAC  180
V  84.7% (205/242)  IGHV4-59*08  139  ......GG..AT.....T..........GC.....C.A.............A....T..A...A..........A......T...A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  L  S  M  D  W  Y  G  E  S 
                    Query_9227   181  CAATTCTCCCTGAAATTGAGGTCTGTGACCGCCGCAGACACGGCCATGTATTATTGCGCGAGGCTTAGCATGGACTGGTACGGGGAGTCG  270
V  84.7% (205/242)  IGHV4-59*08  229  ..G...........GC....C........................G.......C..T.....----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  92.3% (12/13)    IGHD3-10*01  10   ---------------------------------------------------------------------------....T........--  22

                                      GT------------------------>                                 
                                       T  Y  Y  Y  Y  G  I  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_9227   271  ACCTACTACTACTACGGGATAGATGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  330
J  93.1% (54/58)    IGHJ6*02     5    --...............T..G..C..........A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_292048

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           304     1e-84
IGHD3-10*01                                                                                           41.1    7e-08
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAC	TATTATTATGGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTATTATTATGGTTCGGGGAGTTATTTTGACTTC	ARGHYYYGSGSYFDF	252	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	35	33	21	12	0	63.6
CDR1-IMGT	36	65	30	26	4	0	86.7
FR2-IMGT	66	116	51	47	4	0	92.2
CDR2-IMGT	117	137	21	21	0	0	100
FR3-IMGT	138	251	114	103	11	0	90.4
CDR3-IMGT (germline)	252	258	7	7	0	0	100
Total	N/A	N/A	256	225	31	0	87.9


Alignments

                                      <-----------FR1-IMGT------------><----------CDR1-IMGT---------><--------------------FR2-IM
                                       S  L  R  L  S  C  T  V  T  F  S  R  G  S  I  S  S  G  G  F  Y  W  D  W  I  R  Q  H  P  G 
                    Query_9228   3    TCCCTGAGACTCTCCTGTACTGTCACTTTCTCTCGTGGCTCCATTAGCAGTGGCGGTTTCTACTGGGACTGGATCCGCCAGCACCCCGGG  92
V  87.9% (225/256)  IGHV4-31*03  43   ..A.A..CC..G...CTC..CTG....G.....G..........C........T....A.......AG..................A...  132
                                       S  Q  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  G  L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  V  D 
                    Query_9228   93   AAGGGCCTGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCCGGAGTCGACTTACCATATCAGTGGAC  182
V  87.9% (225/256)  IGHV4-31*03  133  .....................T.........................................AA.......G.............A...  222
                                       K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-----------------CDR
                                       T  S  K  N  Q  L  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  Y  Y  Y 
                    Query_9228   183  ACGTCTAAGAATCAATTGTCCCTGAGGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTATTGTGCGAGAGGCCACTATTATTAT  272
V  87.9% (225/256)  IGHV4-31*03  223  ...........C..G..C.......A......C..........................G.....C..........--------------  298
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  95.8% (23/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------------.....C...  10

                                      3-IMGT----------------->                                  
                                       G  S  G  S  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9228   273  GGTTCGGGGAGTTATTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  95.8% (23/24)    IGHD3-10*01  11   ...............-------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_292049

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD3-22*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTTTG	ACTATGATAGTAGTGGT	ACTTACCACGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTTGACTATGATAGTAGTGGTACTTACCACGTTTTTGACTAC	ARFDYDSSGTYHVFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	235	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9229   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (235/242)  IGHV4-59*01  49   ..............................................A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  N 
                    Query_9229   91   TGGATTGGATATATCTATTACAGTGGCAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCCAGGAAC  180
V  97.1% (235/242)  IGHV4-59*01  139  ........G.................G..C..........................................G............A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  D  Y  D  S  S  G  T  Y 
                    Query_9229   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTTTGACTATGATAGTAGTGGTACTTAC  270
V  97.1% (235/242)  IGHV4-59*01  229  ....................C.........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (17/17)   IGHD3-22*01  6    -------------------------------------------------------------------.................------  22

                                      -------------->                                  
                                       H  V  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9229   271  CACGTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_292046

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD4-17*01                                                                                           14.1    8.7  
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TGGGCCTCAGGGCACTC	ACTACGG	GATGTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGGGCCTCAGGGCACTCACTACGGGATGTCCTACTTCTACGGATTGGACGTC	ASGPQGTHYGMSYFYGLDV	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	229	12	0	95


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  T  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_9230   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAACTGGATCCGGCAACCCCCAGGGAAGGGACTGGAGT  93
V  95.0% (229/241)  IGHV4-59*01  50   .....TCC...A..............................G...........G............G......................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  T  G  S  T  D  Y  N  P  S  L  Q  S  R  L  T  I  S  V  D  T  S  K  N  
                    Query_9230   94   GGATTGGGTATATCTATTACACTGGGAGCACCGACTACAACCCCTCCCTCCAGAGTCGACTCACCATATCAGTAGACACGTCCAAGAACC  183
V  95.0% (229/241)  IGHV4-59*01  140  .....................G..........A.................A........G..............................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  G  P  Q  G  T  H  Y  G  M  
                    Query_9230   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCAGCGGACACGGCCGTGTATTACTGTGCGAGTGGGCCTCAGGGCACTCACTACGGGATGT  273
V  95.0% (229/241)  IGHV4-59*01  230  ...............................T.............................-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (7/7)     IGHD4-17*01  3    ------------------------------------------------------------------------------.......-----  9

                                      ---------------------->                                 
                                      S  Y  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9230   274  CCTACTTCTACGGATTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  94.5% (52/55)    IGHJ6*02     8    -.....A......TA.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_292047

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           410     1e-116
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ2*01                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGA	TACTATGACAGTAGTGGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTC	ARDGYYDSSGYYYDL	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  S  Y  S  F  S  S  H 
                    Query_9231   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTAGTTACAGTTTTAGCAGCCAC  91
V  95.2% (276/290)  IGHV1-18*04  7    .....................................................................G......CC....C....T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  D  Y  A  R 
                    Query_9231   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGGTGGATCAGCGGTTACAATGGTAACACAGACTATGCACGG  181
V  95.2% (276/290)  IGHV1-18*04  97   ................................A.................A..........C................A.........A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  A  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  T  S  D  D  T  A 
                    Query_9231   182  AAGTTCCAGGGCAGAGTCACCATGACCGCAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGACATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*04  187  ...C.......................A.............................................G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  D  G  Y  Y  D  S  S  G  Y  Y  Y  D  L  W  G  R  G  T  L  V  T  V  S  S 
                    Query_9231   272  GTGTATTACTGTGCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTCTGGGGCCGGGGAACCCTGGTCACTGTCTCCTCA  361
V  95.2% (276/290)  IGHV1-18*04  277  ...............A....----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  95.2% (20/21)    IGHD3-22*01  5    ------------------------........T............---------------------------------------------  25
J  91.3% (42/46)    IGHJ2*01     8    ---------------------------------------------....T...T...........T..C.....................  52

                                       
                                       
                    Query_9231   362  G  362
J  91.3% (42/46)    IGHJ2*01     53   .  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_292044

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     8e-121
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGGACAC	TGTAGTAGTGCCATCTGCGATG	GACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTAC	ARHMGHCSSAICDGPDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	281	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  Q  K  P  G  E  A  L  K  I  S  C  K  G  S  G  Y  S  F  G  S  Y
                    Query_9232   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGCAAAAGCCGGGGGAGGCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCAGTTA  90
V  96.6% (281/291)  IGHV5-51*01  6    ............................A.......C......T......................................AC...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_9232   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.6% (281/291)  IGHV5-51*01  96   ........G.................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_9232   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  96.6% (281/291)  IGHV5-51*01  186  .............................C.........C.................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  M  G  H  C  S  S  A  I  C  D  G  P  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_9232   271  CATGTATTACTGTGCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  96.6% (281/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  86.4% (19/22)    IGHD2-2*01   8    -------------------------------.........A...G....T...-------------------------------------  29
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_9232   361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_292042

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           274     8e-76
IGHD4-17*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGCGGCAC	TGACTACATTGACTAC	GGGGAGGCCGCTCCACGGGAGGTG	GGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGACGGCGGCACTGACTACATTGACTACGGGGAGGCCGCTCCACGGGAGGTGGGTCTGGACGTC	VRDGGTDYIDYGEAAPREVGLDV	235	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	18	21	4	4	0	0	100
CDR1-IMGT	22	45	24	21	3	0	87.5
FR2-IMGT	46	96	51	47	4	0	92.2
CDR2-IMGT	97	120	24	18	6	0	75
FR3-IMGT	121	234	114	103	11	0	90.4
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	225	200	25	0	88.9


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  N  G  Y  A  I  H  W  V  R  R  A  P  G  K  G  L  E  W  V  A  I  I  W  V  D
                    Query_9233   18   GTCTGGATTCACCTTCAATGGCTATGCCATACACTGGGTCCGCCGGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCCATTATTTGGGTTGA  107
V  88.9% (200/225)  IGHV3-33*01  72   .................G.A......G...G.............A..............................AG....A...TA...  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  V  N  Q  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  K  N  T  V  Y  L  Q  M  N
                    Query_9233   108  TGGAGTTAATCAAAACTATGCTGACTCCGTGAAGGGCCGATTCACCGTTTCCAGAGACAATTCCAAGAACACAGTGTATTTGCAAATGAA  197
V  88.9% (200/225)  IGHV3-33*01  162  ....AG....A..T.......A........................A.C.......................GC.....C..........  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------------------CDR3-IMGT--------------
                                        S  L  T  A  E  D  T  A  V  Y  Y  C  V  R  D  G  G  T  D  Y  I  D  Y  G  E  A  A  P  R  E
                    Query_9233   198  CAGCCTGACGGCCGAAGACACGGCTGTCTATTACTGTGTGAGAGACGGCGGCACTGACTACATTGACTACGGGGAGGCCGCTCCACGGGA  287
V  88.9% (200/225)  IGHV3-33*01  252  ........GA.....G...........G..........C......---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  87.5% (14/16)    IGHD4-17*01  1    ------------------------------------------------------.......GG.......--------------------  16

                                      --------------->                                 
                                        V  G  L  D  V  W  G  Q  G  A  T  V  S  V  S  S 
                    Query_9233   288  GGTGGGTCTGGACGTCTGGGGCCAAGGGGCCACGGTCAGCGTCTCCTCA  336
J  93.3% (42/45)    IGHJ6*02     18   ----...A....................A.........C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_292040

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           322     2e-90
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_9234   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_9234   91   CTAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-61*08  139  ..G..................T..T................C.................G.......TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N 
                    Query_9234   181  AGGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTTTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAAC  270
V  91.2% (228/250)  IGHV4-61*08  229  .A.................A.....GC..........................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G..G.....G.  22

                                      3-IMGT----------------------->                                  
                                       C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9234   271  TGCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  86.4% (19/22)    IGHD2-15*01  23   ......----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_292041

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           322     2e-90
IGHD2-21*01                                                                                           25.7    0.003
IGHJ2*01                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCCAGCTATTTTGTA	GTGGTGGTGCTTGCTA	CGGGGACAAAAGGAG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCCAGCTATTTTGTAGTGGTGGTGCTTGCTACGGGGACAAAAGGAGCTGGTACTTCGATCTC	ARAQLFCSGGACYGDKRSWYFDL	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	30	23	1	6	76.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	248	229	13	6	92.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N        Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9235   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAAT------TACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  84
V  92.3% (229/248)  IGHV4-39*01  49   ..............................................G.AGTTAC....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  Q  W  I  G  S  I  Y  Y  S  G  D  T  F  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9235   85   CTGCAATGGATTGGGAGTATCTATTATAGTGGTGACACCTTCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  174
V  92.3% (229/248)  IGHV4-39*01  139  ...G.G..........................GAG.....A.................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  K  Q  F  S  L  K  L  S  S  A  T  V  T  D  T  A  V  Y  F  C  A  R  A  Q  L  F  C  S  G 
                    Query_9235   175  AAGAAGCAGTTCTCCCTGAAGCTGAGCTCTGCGACCGTCACAGACACGGCTGTTTATTTCTGTGCGAGGGCCCAGCTATTTTGTAGTGGT  264
V  92.3% (229/248)  IGHV4-39*01  229  .....C.........................T.....C.G.............G....A.........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  93.8% (15/16)    IGHD2-21*01  9    -------------------------------------------------------------------------------------.....  13

                                      ---CDR3-IMGT----------------------------->                                  
                                       G  A  C  Y  G  D  K  R  S  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9235   265  GGTGCTTGCTACGGGGACAAAAGGAGCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  340
D  93.8% (15/16)    IGHD2-21*01  14   ....A......-----------------------------------------------------------------  24
J  100.0% (50/50)   IGHJ2*01     4    --------------------------..................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_120189

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           338     4e-95
IGHD3-3*01                                                                                            21.8    0.040
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGTATGAC	TTTTTGGAGTG	ATTTTCGAATGGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGTATGACTTTTTGGAGTGATTTTCGAATGGGC	AGMTFWSDFRMG	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9236   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGCAGTAGCAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  93.9% (231/246)  IGHV4-39*01  49   ..................A............................T.........................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  I  I  Y  H  S  G  S  T  Y  Y  K  P  S  L  K  S  R  L  T  M  S  V  D  T  S 
                    Query_9236   91   CTGGAATGGATTGGAATTATTTATCATAGTGGGAGCACCTACTATAAGCCGTCCCTCAAGAGTCGACTCACCATGTCCGTGGACACGTCC  180
V  93.9% (231/246)  IGHV4-39*01  139  .....G........G.G...C...T...................C..C..................G.......A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  T  D  T  A  V  Y  Y  C  A  G  M  T  F  W  S  D  F 
                    Query_9236   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCACAGACACGGCTGTGTATTACTGTGCGGGTATGACTTTTTGGAGTGATTTT  270
V  93.9% (231/246)  IGHV4-39*01  229  ...................A...................G..........................------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (11/11)   IGHD3-3*01   10   --------------------------------------------------------------------------...........-----  20

                                      -------->                                  
                                       R  M  G  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9236   271  CGAATGGGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (35/35)   IGHJ4*02     14   --------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_120187

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           343     2e-96
IGHD4-17*01                                                                                           12.2    33   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD4-17*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCGAGCGGATCGGCTAGAACACAC	CTAGGGTGA	AACGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCGAGCGGATCGGCTAGAACACACCTAGGGTGAAACGTACTACTTTGACTCC	ARHRADRLEHT*GETYYFDS	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9237   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (232/245)  IGHV4-59*08  49   ........................................G....T............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  S  G  S  T  T  Y  N  P  S  L  E  G  R  A  T  I  P  A  D  T  S  K  N 
                    Query_9237   91   TGGATTGGCTATCTCTATTACAGTGGGAGCACCACCTACAACCCCTCCCTCGAGGGTCGAGCCACCATACCAGCAGACACGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-59*08  139  ........G...A.....................A................A..A......T.......T...T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  R  A  D  R  L  E  H  T 
                    Query_9237   181  CAGTTCTCCCTGAGGCTGAACTCTGTGACCGCCGCAGACACGGCCGTTTATTACTGTGCGAGACATCGAGCGGATCGGCTAGAACACACC  270
V  94.7% (232/245)  IGHV4-59*08  229  .............A.....G...........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (8/9)      IGHD4-17*01  4    -----------------------------------------------------------------------------------------.  4

                                      GT------------------------>                                  
                                       *  G  E  T  Y  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9237   271  TAGGGTGAAACGTACTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  88.9% (8/9)      IGHD4-17*01  5    ..C.....-----------------------------------------------------  12
J  97.9% (47/48)    IGHJ4*02     1    -------------............A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_48331

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           321     6e-90
IGHD7-27*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAAG	GAAC	AACTGGGGA	ATC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGGAACAACTGGGGAATCGACTTC	TRNNWGIDF	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  W  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_9238   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAACTACTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGGCTAA  90
V  91.5% (226/247)  IGHV3-74*01  47   .............................................G..........................C...............GG  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      M  W  V  S  R  I  T  S  D  A  S  A  A  G  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  A  
                    Query_9238   91   TGTGGGTCTCACGTATTACTAGTGATGCGAGTGCCGCAGGCTACGCGGACTCCGTGAAGGGCCGATTCTCCATCTCCAGAGACAACGCCA  180
V  91.5% (226/247)  IGHV3-74*01  137  ..................A........G....AG.A..A.............................A.....................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      N  N  M  L  Y  L  Q  M  N  S  L  R  A  E  D  S  A  I  Y  Y  C  T  R  N  N  W  G  I  D  F  
                    Query_9238   181  ACAATATGCTATATCTGCAGATGAACAGCCTGAGAGCCGAGGACTCGGCTATATATTACTGTACAAGGAACAACTGGGGAATCGACTTCT  270
V  91.5% (226/247)  IGHV3-74*01  227  .G..C.C...G........A........T...............A.....G.G.........G....-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD7-27*01  3    -----------------------------------------------------------------------.........----------  11
J  92.5% (37/40)    IGHJ4*02     9    -----------------------------------------------------------------------------------....A..  15

                                                                       
                                      W  G  Q  G  T  L  V  I  V  S  S  
                    Query_9238   271  GGGGCCAGGGAACCCTGGTCATCGTCTCTTCAG  303
J  92.5% (37/40)    IGHJ4*02     16   .....................C......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_120185

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           277     9e-77
IGHD2-8*02                                                                                            21.8    0.042
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAGCTGGGA	ATTGTACTGGT	AATAGGTGCCAGTCCTATGGCTTCAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAGCTGGGAATTGTACTGGTAATAGGTGCCAGTCCTATGGCTTCAGTGACTCC	ARAAGNCTGNRCQSYGFSDS	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	19	5	0	79.2
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	16	8	0	66.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	231	204	27	0	88.3


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  S  F  R  H  F  A  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  
                    Query_9239   14   GTGCAGCCTCTGGATTCAGCTTTAGACACTTTGCCATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCGGCTATTG  103
V  88.3% (204/231)  IGHV3-23*01  65   ..................C......CAG..A........GC.........................................A......A  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      G  S  S  R  Q  S  P  F  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_9239   104  GTAGTAGTCGTCAGAGTCCATTTTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCAAGAACACACTATATCTGC  193
V  88.3% (204/231)  IGHV3-23*01  155  ..G.....G..GGT..CA...AC..............................A.........................G..G.......  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------------CDR3-IMGT-----------
                                      Q  M  N  S  L  R  A  E  D  T  A  M  Y  Y  C  A  R  A  A  G  N  C  T  G  N  R  C  Q  S  Y  
                    Query_9239   194  AGATGAATAGCCTGCGAGCCGAGGACACGGCCATGTATTACTGTGCGAGAGCAGCTGGGAATTGTACTGGTAATAGGTGCCAGTCCTATG  283
V  88.3% (204/231)  IGHV3-23*01  245  .A.....C......A.................G.A.............A..---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (11/11)   IGHD2-8*02   6    ------------------------------------------------------------...........-------------------  16

                                      ------------->                                  
                                      G  F  S  D  S  W  G  Q  G  G  L  V  T  V  S  S  
                    Query_9239   284  GCTTCAGTGACTCCTGGGGCCAGGGAGGCCTGGTCACCGTCTCCTCAG  331
J  92.7% (38/41)    IGHJ4*02     8    -------.....A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_48333

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           338     5e-95
IGHD2-15*01                                                                                           14.1    8.3  
IGHJ4*01                                                                                              48.8    7e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGCCCGCTGCCC	GTGGTGGCTG	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGATCAGCCCGCTGCCCGTGGTGGCTGCTTTGACTAC	TRDQPAARGGCFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  N  Y  W  M  N  W  V  R  Q  V  P  G  K  G  L  
                    Query_9240   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTAACTACTGGATGAACTGGGTCCGCCAAGTTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-74*01  47   ....................G........................G..........C...............C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  P  G  G  S  S  T  S  Y  A  A  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_9240   91   TGTGGGTCTCACGAATTAACCCTGGTGGGAGTAGCACAAGCTACGCGGCCTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATGCCA  180
V  93.2% (233/250)  IGHV3-74*01  137  .............T.....TAG..A.......................A......................A.............C....  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  G  D  T  A  L  Y  Y  C  T  R  D  Q  P  A  A  R  G  
                    Query_9240   181  AGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGTCGGGGACACGGCTCTTTATTACTGTACAAGAGATCAGCCCGCTGCCCGTGGTG  270
V  93.2% (233/250)  IGHV3-74*01  227  ....................................C..A..........G.G.........G.......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD2-15*01  15   ------------------------------------------------------------------------------------.....A  20

                                      ------------->                                 
                                      G  C  F  D  Y  W  G  R  A  A  L  V  P  V  S  S 
                    Query_9240   271  GCTGCTTTGACTACTGGGGCCGCGCAGCCCTCGTCCCCGTCTCCTCA  317
D  90.0% (9/10)     IGHD2-15*01  21   ....-------------------------------------------  24
J  86.0% (37/43)    IGHJ4*01     5    ----.................AA.G.A....G...A...........  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_120183

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            382     4e-108
IGHD1-26*01                                                                                           12.2    35    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	267	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y
                    Query_9241   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACCACTTA  90
V  92.1% (267/290)  IGHV1-8*01   6    ..................................................................T........C..........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F  A  Q
                    Query_9241   91   TGATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTTGCACA  180
V  92.1% (267/290)  IGHV1-8*01   96   .................................A..G..............A..............C.G...T..........A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D  T  A
                    Query_9241   181  GAGATTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGACACGGC  270
V  92.1% (267/290)  IGHV1-8*01   186  ..AG...C............................C.....A.................GC............G..C..AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_9241   271  CATATATTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  352
V  92.1% (267/290)  IGHV1-8*01   276  .G.G................--------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   -----------------------------...G.....--------------------------------------------  18
J  100.0% (40/40)   IGHJ5*02     11   ------------------------------------------........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_120182

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           396     2e-112
IGHD3-3*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GG	TTACGATTTTTGGAGTGGTT	TCAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTTACGATTTTTGGAGTGGTTTCAGACTTTGACTAC	ARVTIFGVVSDFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	270	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T  Y  H 
                    Query_9242   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTACCTACCAC  91
V  94.1% (270/287)  IGHV1-18*04  7    ............................................................................C.......AG.T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  T  D  G  N  T  H  Y  A  H 
                    Query_9242   92   GGTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTACCGATGGGAACACACACTATGCACAC  181
V  94.1% (270/287)  IGHV1-18*04  97   .......G.......................................................TA.A....T......A..........G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  V  Q  G  R  V  T  L  T  T  D  S  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_9242   182  AACGTCCAGGGCAGAGTCACCTTGACCACAGACTCATCCACGAGCACCGCCTACATGGAGCTGAGGAGCCTGAGGTCTGACGACACGGCC  271
V  94.1% (270/287)  IGHV1-18*04  187  ..GC.................A...........A.............A..........................A...............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  V  T  I  F  G  V  V  S  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9242   272  GTGTATTACTGTGCGAGGGTTACGATTTTTGGAGTGGTTTCAGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  94.1% (270/287)  IGHV1-18*04  277  .................-----------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                          
D  100.0% (20/20)   IGHD3-3*01   4    -------------------....................-------------------------------------------------  23
J  100.0% (45/45)   IGHJ4*02     4    -------------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_48336

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           363     2e-102
IGHD1-26*01                                                                                           16.1    2.4   
IGHJ1*01                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGC	GGGAGCTA	TCCCTGGCGACTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGATCGGCGGGAGCTATCCCTGGCGACTTC	SRSAGAIPGDF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	288	260	28	0	90.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  F 
                    Query_9243   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCGACTTT  91
V  90.3% (260/288)  IGHV1-18*01  7    ....................................................................................AG..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  T  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  R  A  A  Y  N  A  D  T  K  D  T  P 
                    Query_9243   92   GGTGTCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGTTGGGATGGAGAGCCGCTTACAATGCTGACACAAAGGATACACCG  181
V  90.3% (260/288)  IGHV1-18*01  97   ...A...G.....................................A.........TCAG...........G.A.......CT..G...A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  L  T  L  T  T  D  S  S  T  S  T  A  Y  L  D  L  R  S  L  R  S  D  D  T  A 
                    Query_9243   182  AAACTCCAGGGCAGACTCACCTTGACCACCGACTCATCCACGAGCACAGCCTACTTGGACTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  90.3% (260/288)  IGHV1-18*01  187  ..G............G.....A.......A...A....................A....GC.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       L  C  Y  C  S  R  S  A  G  A  I  P  G  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9243   272  CTGTGCTACTGTTCGAGATCGGCGGGAGCTATCCCTGGCGACTTCTGGGGCCAGGGCACCCTCGTCACCGTCTCCTCAG  350
V  90.3% (260/288)  IGHV1-18*01  277  G...AT......G.....-------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                              
D  100.0% (8/8)     IGHD1-26*01  9    -----------------------........------------------------------------------------  16
J  97.1% (34/35)    IGHJ1*01     18   --------------------------------------------..................G................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_128758

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           410     1e-116
IGHD1-1*01                                                                                            10.3    132   
IGHJ5*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGCAC	CCAACCCCGATGGCA	ACAAC	CTA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGCACCCAACCCCGATGGCAACAACCTACC	STQPRWQQPT	290	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	175	30	28	2	0	93.3
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	294	5	4	1	0	80
Total	N/A	N/A	294	278	16	0	94.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  T  S  G  F  I  F  S  T  T
                    Query_9244   1    GCAGCTGGTGCAGTCTGGGGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAACCTCTGGATTCATTTTCAGTACCAC  90
V  94.6% (278/294)  IGHV3-15*01  6    ..........G.....................................................G............C........A.G.  95
                                        Q  L  V  E  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A

                                      ---><--------------------FR2-IMGT---------------------><----------CDR2-IMGT---------><----
                                        W  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  I  D  G  E  T  T  D  Y
                    Query_9244   91   CTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAATTGATGGTGAGACAACAGACTA  180
V  94.6% (278/294)  IGHV3-15*01  96   ........G...........................................................C........G............  185
                                        W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y

                                      ------------------------------------------------FR3-IMGT----------------------------------
                                        A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  E  T  E  D
                    Query_9244   181  CGCTGCACCCGTGAAGGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATTTGCAAATGAACAGCCTGGAAACCGAGGA  270
V  94.6% (278/294)  IGHV3-15*01  186  ...............A.............................................C.................A..........  275
                                        A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D

                                      ------------------><----------CDR3-IMGT--------->                                  
                                        T  A  L  F  Y  C  S  T  Q  P  R  W  Q  Q  P  T  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9244   271  CACAGCCCTTTTCTACTGTAGCACCCAACCCCGATGGCAACAACCTACCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  94.6% (278/294)  IGHV3-15*01  276  .......G.G.AT.......C...-----------------------------------------------------------  299
                                        T  A  V  Y  Y  C  T  T                                                           
D  100.0% (5/5)     IGHD1-1*01   4    ---------------------------------------.....---------------------------------------  8
J  100.0% (36/36)   IGHJ5*02     16   -----------------------------------------------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_128759

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           333     1e-93
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCATCA	TATAGCAGTGGCTGG	GT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATCATATAGCAGTGGCTGGGTACTACTTTGACTAC	ARHHIAVAGYYFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  N  S  Y  S  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9245   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACCTTCAATTCCTATAGTATAAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (230/247)  IGHV3-21*01  47   ................................T.........G.AG......C..G.AC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  S  S  S  S  L  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9245   91   AGTGGGTCTCATTTATCAGTAGTAGTAGTCTTTATATATATTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.1% (230/247)  IGHV3-21*01  137  ............CC..T............AG...C.....C.................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  H  H  I  A  V  A  G  
                    Query_9245   181  AGAACTCACTGTCTCTGCAAATGAACAGCCTAAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGCATCATATAGCAGTGGCTGGGT  270
V  93.1% (230/247)  IGHV3-21*01  227  ............A..................G...................................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (15/15)   IGHD6-19*01  4    -------------------------------------------------------------------------...............--  18

                                      ------------->                                  
                                      Y  Y  F  D  Y  W  G  Q  V  T  Q  V  T  V  S  S  
                    Query_9245   271  ACTACTTTGACTACTGGGGCCAGGTAACCCAGGTCACCGTCTCCTCAG  318
J  95.8% (46/48)    IGHJ4*02     1    ........................G.....T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_128752

Length=414
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           316     2e-88
IGHD3-3*02                                                                                            14.1    10   
IGHJ3*02                                                                                              91.1    2e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGAC	CATATTTGGA	AATATGTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGACCATATTTGGAAATATGTTTGATGCTTTTGATATT	ARPTIFGNMFDAFDI	311	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	97	97	68	2	27	70.1
CDR1-IMGT	98	121	24	19	5	0	79.2
FR2-IMGT	122	172	51	46	5	0	90.2
CDR2-IMGT	173	196	24	19	5	0	79.2
FR3-IMGT	197	310	114	103	11	0	90.4
CDR3-IMGT (germline)	311	316	6	6	0	0	100
Total	N/A	N/A	316	261	28	27	82.6


Alignments

                                      <-------------------------------------------FR1-IMGT--------------------------------------
                                        Q  L  V  Q  S  G  A  E  V  K  M  P  G  S  S  V  K  V  S  C  K  A  S  G  G  C  F  N  K  F
                    Query_9246   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGATGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCTGCTTTAACAAGTT  90
V  82.6% (261/316)  IGHV1-69*01  6    ..................G.............A...................................----------------------  73
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A                        

                                      ------><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------
                                        A  S  G  G  C  F  H  N  Y  A  M  S  W  V  R  Q  A  P  G  Q  G  L  Q  W  V  G  G  I  L  P
                    Query_9246   91   TGCTTCTGGAGGCTGCTTCCACAACTATGCTATGAGCTGGGTGCGCCAGGCCCCTGGACAAGGGCTTCAATGGGTGGGAGGGATCCTCCC  180
V  82.6% (261/316)  IGHV1-69*01  74   -----........AC....AG..G.........C...........A.....................G.G...A...........A....  158
                                           S  G  G  T  F  S  S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P

                                      CDR2-IMGT------><----------------------------------------------------FR3-IMGT-------------
                                        V  F  G  K  T  D  Y  A  Q  R  F  H  G  R  V  T  I  T  A  D  D  S  T  S  T  S  Y  L  E  L
                    Query_9246   181  TGTCTTTGGAAAAACAGACTACGCACAGAGGTTCCACGGCAGAGTCACGATTACCGCGGACGATTCCACGAGCACATCCTACCTGGAGTT  270
V  82.6% (261/316)  IGHV1-69*01  159  .A.......T.C.G..A............A......G..........................A............G.....A.....C.  248
                                        I  F  G  T  A  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L

                                      ---------------------------------------><-----------------CDR3-IMGT----------------->     
                                        S  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  P  T  I  F  G  N  M  F  D  A  F  D  I  W  G
                    Query_9246   271  GAGTAGCCTGAGACCTGAGGACACGGCCGTCTATTATTGTGCGAGACCGACCATATTTGGAAATATGTTTGATGCTTTTGATATTTGGGG  360
V  82.6% (261/316)  IGHV1-69*01  249  ...C.........T................G.....C.........--------------------------------------------  294
                                        S  S  L  R  S  E  D  T  A  V  Y  Y  C  A  R                                             
D  90.0% (9/10)     IGHD3-3*02   8    ---------------------------------------------------...T......-----------------------------  17
J  98.0% (49/50)    IGHJ3*02     1    ---------------------------------------------------------------------...............C.....  21

                                                                   
                                        Q  G  T  M  V  T  V  S  S  
                    Query_9246   361  CCAAGGGACAATGGTCACCGTCTCTTCAG  389
J  98.0% (49/50)    IGHJ3*02     22   .............................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40604112


Query= Query_128753

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           321     7e-90
IGHD2-2*02                                                                                            14.1    8.3  
IGHJ3*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGGGCCCTAGAAG	GCTATAC	AGAG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGCCCTAGAAGGCTATACAGAGGCTTTTGATATC	ARGGALEGYTEAFDI	239	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	28	22	22	0	0	100
CDR1-IMGT	29	52	24	22	2	0	91.7
FR2-IMGT	53	103	51	49	2	0	96.1
CDR2-IMGT	104	124	21	17	4	0	81
FR3-IMGT	125	238	114	105	9	0	92.1
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	239	222	17	0	92.9


Alignments

                                      <------FR1-IMGT------><-------CDR1-IMGT------><--------------------FR2-IMGT---------------
                                        S  L  T  C  T  V  S  G  G  S  I  N  N  Y  Y  W  S  W  M  R  Q  P  P  G  K  G  L  E  W  I
                    Query_9247   7    GTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAATTACTACTGGAGCTGGATGCGGCAGCCCCCAGGGAAGGGACTGGAGTGGAT  96
V  92.9% (222/239)  IGHV4-59*01  54   ...................................G..G..................C................................  143
                                        S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I

                                      ------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-
                                        G  C  F  Y  Y  G  G  N  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  G  T  S  K  N  Q  F
                    Query_9247   97   TGGGTGTTTCTATTACGGTGGAAACACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTGGGCACGTCCAAGAACCAGTT  186
V  92.9% (222/239)  IGHV4-59*01  144  .....A.A........A....G.G....A..................................A.....A.A..................  233
                                        G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F

                                      ---------------------------------------------------><-----------------CDR3-IMGT-----------
                                        S  L  K  L  N  S  L  T  S  A  D  T  A  V  Y  Y  C  A  R  G  G  A  L  E  G  Y  T  E  A  F
                    Query_9247   187  CTCCCTGAAGCTGAACTCTCTGACGTCTGCGGACACGGCCGTATATTACTGTGCGAGAGGGGGGGCCCTAGAAGGCTATACAGAGGCTTT  276
V  92.9% (222/239)  IGHV4-59*01  234  ..............G....G....CG................G................-------------------------------  292
                                        S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                                 
D  100.0% (7/7)     IGHD2-2*02   24   --------------------------------------------------------------------------.......---------  30
J  95.7% (44/46)    IGHJ3*02     5    -------------------------------------------------------------------------------------.....  9

                                      ------>                                  
                                        D  I  W  G  Q  G  T  A  V  T  V  S  S  
                    Query_9247   277  TGATATCTGGGGCCAAGGGACAGCGGTCACCGTCTCTTCAG  317
J  95.7% (44/46)    IGHJ3*02     10   ......................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_128750

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           375     3e-106
IGHD3-3*01                                                                                            12.2    37    
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAGCGAC	CGATTT	CTCGGGAATACTTA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAGCGACCGATTTCTCGGGAATACTTATACTACGGTATGGATGTC	AKDKRPISREYLYYGMDV	289	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	100	14	0	87.7
CDR3-IMGT (germline)	289	296	8	7	1	0	87.5
Total	N/A	N/A	296	268	28	0	90.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  S  F  T 
                    Query_9248   1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACGTCTGGTTATAGTTTCACC  90
V  90.5% (268/296)  IGHV1-18*04  1    .....T...............................A...............................G.T........C.CC..T...  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  V  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  K  G  N  T  H  Y 
                    Query_9248   91   AACTACGGTGTCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAAGGGTAACACACACTAT  180
V  90.5% (268/296)  IGHV1-18*04  91   .G.......A....C........................................................C..T.........A.....  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       G  Q  K  F  Q  G  R  V  V  M  T  T  E  T  S  T  S  T  V  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_9248   181  GGTCAGAAGTTCCAGGGCAGAGTCGTCATGACGACAGAGACATCCACGAGCACAGTCTACATGGAGTTGCGGAGTCTGAGATCTGACGAC  270
V  90.5% (268/296)  IGHV1-18*04  181  .CA......C..............AC......C.....C................C..........C..A....C...............  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  K  D  K  R  P  I  S  R  E  Y  L  Y  Y  G  M  D  V  W  G  Q  G  T  T 
                    Query_9248   271  ACGGCCGTCTATTACTGCGCGAAAGATAAGCGACCGATTTCTCGGGAATACTTATACTACGGTATGGATGTCTGGGGCCAGGGGACCACG  360
V  90.5% (268/296)  IGHV1-18*04  271  ........G........T....G...----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD3-3*01   7    ----------------------------------......--------------------------------------------------  12
J  96.0% (48/50)    IGHJ6*02     12   ------------------------------------------------------..............C...........A.........  47

                                                    
                                       V  T  V  S  S
                    Query_9248   361  GTCACCGTCTCCTC  374
J  96.0% (48/50)    IGHJ6*02     48   ..............  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_128751

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     3e-93
IGHD2-21*02                                                                                           31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCGT	GCATTTTGTGGTGATGACTGCT	TCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGTGCATTTTGTGGTGATGACTGCTTCCCCTTTGACTAC	ARRAFCGDDCFPFDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	227	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  F  N  I  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9249   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCTTCAACATTTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.8% (227/242)  IGHV4-59*08  49   ....................................A...GT.G............C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  T  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  S  S  K  N 
                    Query_9249   91   TGGATTGGGTATATCTCTTACAGTGGGACCACCAACTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGTAGACTCGTCCAAGAAT  180
V  93.8% (227/242)  IGHV4-59*08  139  ................A...........G......................A..........................A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  V  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  R  A  F  C  G  D  D  C  F 
                    Query_9249   181  CAGGTCTCCCTGAAACTGACCTCTGTGACCGCCGCAGACACGGCCATATATTACTGTGCGAGGCGTGCATTTTGTGGTGATGACTGCTTC  270
V  93.8% (227/242)  IGHV4-59*08  229  ...T..........G....G.........................G.G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (20/22)    IGHD2-21*02  2    ------------------------------------------------------------------....A........G........--  23

                                      ----------->                                  
                                       P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9249   271  CCCTTTGACTACTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  316
J  97.7% (43/44)    IGHJ4*02     5    --..............................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_128756

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         357     1e-100
IGHD3-10*01                                                                                           10.3    115   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GA	GGGGA	CAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAGGGGACATTATGGACGTC	ARGGDIMDV	244	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  E  G 
                    Query_9250     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGGAGGGC  90
V  95.6% (239/250)  IGHV4-30-2*01  49   ....................................................................................A.....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  H  S  G  L  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  R  S 
                    Query_9250     91   CTGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACAGGTCC  180
V  95.6% (239/250)  IGHV4-30-2*01  139  ..............G......T...........AG..C.T...A......................G.......................  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                         K  N  Q  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  D  I  M  D  V 
                    Query_9250     181  AAGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAGGGGACATTATGGACGTC  270
V  95.6% (239/250)  IGHV4-30-2*01  229  ...........C.......A..................................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01    16   ------------------------------------------------------------------------.....-------------  20
J  100.0% (43/43)   IGHJ6*02       20   --------------------------------------------------------------------------------..........  29

                                                                         
                                         W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9250     271  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  303
J  100.0% (43/43)   IGHJ6*02       30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_128757

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           322     2e-90
IGHD3-3*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGGCGACTT	CGATTTTTGGA	ATAGC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGGCGACTTCGATTTTTGGAATAGCCTACGTTGATTAC	AREGATSIFGIAYVDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  D  Y  F  M  S  W  I  R  Q  V  P  G  K  G  L  
                    Query_9251   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATGACTACTTCATGAGCTGGATCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-11*01  47   ..........................................G........A....................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  G  P  S  A  S  T  L  F  Y  A  D  S  V  R  G  R  F  T  V  S  R  D  N  A  
                    Query_9251   91   AATGGGTTTCATACATTGGTCCTAGTGCTTCCACCTTATTCTACGCTGACTCTGTGAGGGGCCGATTCACCGTCTCAAGGGACAACGCCA  180
V  91.2% (228/250)  IGHV3-11*01  137  .G...............A..AG.....G.AGT...A...A......A..........A.............A....C.............  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  H  L  Q  M  D  S  L  T  A  E  D  S  A  V  Y  Y  C  A  R  E  G  A  T  S  I  F  
                    Query_9251   181  AGAACTCACTGCATCTGCAAATGGACAGCCTGACAGCCGAGGACTCGGCCGTCTATTACTGTGCGAGAGAGGGGGCGACTTCGATTTTTG  270
V  91.2% (228/250)  IGHV3-11*01  227  ...........T...........A.........G..........A.......G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-3*01   7    ---------------------------------------------------------------------------------.........  15

                                      T------------------>                                  
                                      G  I  A  Y  V  D  Y  W  G  Q  G  S  L  V  S  V  S  S  
                    Query_9251   271  GAATAGCCTACGTTGATTACTGGGGCCAGGGATCCCTGGTCTCCGTCTCCTCAG  324
D  100.0% (11/11)   IGHD3-3*01   16   ..----------------------------------------------------  17
J  91.5% (43/47)    IGHJ4*02     2    -------....T....C...............A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_128754

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           424     8e-121
IGHD6-19*01                                                                                           21.8    0.045 
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCAGG	GCAGTGGCTGG	CACG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTC	ARVPGQWLARGMDV	281	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	166	21	18	3	0	85.7
FR3-IMGT	167	280	114	112	2	0	98.2
CDR3-IMGT (germline)	281	287	7	7	0	0	100
Total	N/A	N/A	287	279	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S
                    Query_9252   1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAG  90
V  97.2% (279/287)  IGHV3-53*01  6    ..........G..............................................................................A  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  M  Y  S  G  G  T  T  Y  Y  A  E  S
                    Query_9252   91   CTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATGTATAGCGGTGGGACCACATACTACGCAGAGTC  180
V  97.2% (279/287)  IGHV3-53*01  96   ........G................................................T...........T.G...............C..  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V
                    Query_9252   181  CGTGAAGGGCCGATTCACCATCTCAAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGT  270
V  97.2% (279/287)  IGHV3-53*01  186  ........................C.................................................................  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><----------------CDR3-IMGT--------------->                                 
                                        Y  Y  C  A  R  V  P  G  Q  W  L  A  R  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9252   271  GTATTACTGTGCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  355
V  97.2% (279/287)  IGHV3-53*01  276  .................--------------------------------------------------------------------  292
                                        Y  Y  C  A  R                                                                      
D  100.0% (11/11)   IGHD6-19*01  8    ------------------------...........--------------------------------------------------  18
J  100.0% (46/46)   IGHJ6*02     17   ---------------------------------------..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_338878

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_9253   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.8% (277/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_9253   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_9253   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9253   271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.8% (277/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_9253   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_338879

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           319     2e-89
IGHD3-9*01                                                                                            12.2    31   
IGHJ4*01                                                                                              29.5    4e-04


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TG	GACTGG	GTGGCATCGGGCCCGGCCCCCA	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	40	11	0	78.4
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  C  W  I  Q  Q  P  P  G  K  V 
                    Query_9254   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGCGGTGGTTACTACTGGTGCTGGATCCAGCAGCCACCAGGGAAGGTG  90
V  91.1% (226/248)  IGHV4-31*03  49   ..................................C......C..T...............A.........GC....AC..........GC  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  V  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  R  R  V  T  I  S  V  Y  T  S 
                    Query_9254   91   CTGGAATGGGTTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGACGAGTTACCATATCAGTATACACGTCT  180
V  91.1% (226/248)  IGHV4-31*03  139  .....G...A.....T.C............................................T..................G........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT---------------------------------------------------->                           
                                       K  N  *  F  S  L  E  L  G  S  V  T  A  A  D  S  A  G  Y  Y  C  A  S  G  L  G  G  I  G  P 
                    Query_9254   181  AAGAACTAGTTCTCGCTGGAGCTGGGCTCTGTGACTGCCGCGGACTCGGCCGGGTATTACTGTGCGAGTGGACTGGGTGGCATCGGGCCC  270
V  91.1% (226/248)  IGHV4-31*03  229  ......C.......C...A.....A....................A......T...............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (6/6)     IGHD3-9*01   16   ----------------------------------------------------------------------......--------------  21

                                                                            
                                       G  P  Q  G  H  V  T  L  V  S  F  A  S
                    Query_9254   271  GGCCCCCAGGGCCACGTAACCCTGGTCTCCTTCGCCTC  308
J  83.3% (25/30)    IGHJ4*01     17   --------......A.G..........A..G..T....  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_338874

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            322     2e-90
IGHD3-9*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAAGAGCGGTACGCATTGAT	ACTGTTTATTA	CGAGGGGCCTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAAGAGCGGTACGCATTGATACTGTTTATTACGAGGGGCCTCCTGACTAC	ATRAVRIDTVYYEGPPDY	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  N  S  N  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_9255  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGTCCATCAGTAATAGTAACTGGTGGACTTGGATTCGCCAGCCCCCAGGAAAGGGGCTG  90
V  92.2% (225/244)  IGHV4-4*01  49   ................................C........C.G..............G....G.C..............G.........  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  I  D  S  G  S  T  N  Y  N  P  S  L  M  S  R  V  I  I  S  L  D  K  S  K 
                    Query_9255  91   GAGTGGATTGGGGAAATTATTGATAGTGGGAGCACCAACTACAACCCGTCCCTCATGAGTCGAGTCATCATCTCACTAGACAAGTCCAAG  180
V  92.2% (225/244)  IGHV4-4*01  139  .................CTA.C.................................A...........C...A...G..............  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                      N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  T  R  A  V  R  I  D  T  V 
                    Query_9255  181  AATCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGACAAGAGCGGTACGCATTGATACTGTT  270
V  92.2% (225/244)  IGHV4-4*01  229  ..C..............G....G................................G........--------------------------  292
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  90.9% (10/11)    IGHD3-9*01  17   ------------------------------------------------------------------------------------....G.  22

                                     GT--------------------->                                  
                                      Y  Y  E  G  P  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9255  271  TATTACGAGGGGCCTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  90.9% (10/11)    IGHD3-9*01  23   .....-----------------------------------------------------  27
J  100.0% (41/41)   IGHJ4*02    8    -----------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_338877

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9256   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9256   91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_9256   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9256   271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_338870

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           355     3e-100
IGHD1-26*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTCCGGAG	GTGGGAGCTACT	CGTGGTCCTTTTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCGGAGGTGGGAGCTACTCGTGGTCCTTTTCCTAC	ARGSGGGSYSWSFSY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9257   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGCTTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-21*01  47   .............................................G.......A...A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  S  S  S  S  Y  M  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9257   91   AGTGGGTCTCATCCATTACTAGTAGTAGTAGTTACATGAACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (238/249)  IGHV3-21*01  137  ..................G..................AT...................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  S  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  G  S  G  G  G  S  Y  
                    Query_9257   181  AGAGCTCCCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTTCTGTGCGAGAGGGTCCGGAGGTGGGAGCTACT  270
V  95.6% (238/249)  IGHV3-21*01  227  ...A...A....A.......................................G....A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD1-26*01  7    ------------------------------------------------------------------------------............  18

                                      ---------------->                                  
                                      S  W  S  F  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9257   271  CGTGGTCCTTTTCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (38/38)   IGHJ4*02     11   -------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_338871

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9258   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_9258   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_9258   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9258   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_338873

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           346     2e-97
IGHD3-10*01                                                                                           21.8    0.045
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TCAGCCCCGGAGATGGG	ACTCTGGTTCGGGG	CCCCGGAGATGGGACTATGGTTCGAAGAAGGGGCAG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGCCCCGGAGATGGGACTCTGGTTCGGGGCCCCGGAGATGGGACTATGGTTCGAAGAAGGGGCAGCTACGATCTGGACGTC	VSPGDGTLVRGPGDGTMVRRRGSYDLDV	243	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  C  Y  M  N  W  I  R  Q  A  P  G  K  G  L  
                    Query_9259   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTGCTACATGAACTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.5% (232/243)  IGHV3-11*01  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  G  R  S  G  R  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9259   91   AGTGGATTTCGTACATTGGTCGCAGTGGTAGAACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  95.5% (232/243)  IGHV3-11*01  137  .....G....A......A..A.T........T..........................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  S  P  G  D  G  T  L  V  
                    Query_9259   181  AGAACTCACTTTATCTGCAAATGAACAGCCTGAGAGCCGATGACACGGCCGTCTATTACTGTGTCAGCCCCGGAGATGGGACTCTGGTTC  270
V  95.5% (232/243)  IGHV3-11*01  227  ..........G.............................G...........G..........---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  92.9% (13/14)    IGHD3-10*01  6    --------------------------------------------------------------------------------...A......  15

                                      ----------CDR3-IMGT------------------------------------>                                 
                                      R  G  P  G  D  G  T  M  V  R  R  R  G  S  Y  D  L  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_9259   271  GGGGCCCCGGAGATGGGACTATGGTTCGAAGAAGGGGCAGCTACGATCTGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  359
D  92.9% (13/14)    IGHD3-10*01  16   ....-------------------------------------------------------------------------------------  19
J  93.9% (46/49)    IGHJ6*02     14   ----------------------------------------.....G.A.......................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_63981

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              44.9    1e-08


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAGTTAT	CAGGGTTGGCTCCC	CCCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGGCTCCCCCCC	ARSGSGSYQGWLPP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  P  Y  Y  W  I  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9260   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGTCCTTACTACTGGATCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.1% (223/242)  IGHV4-59*01  49   ..................A............G..........AG...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  H  I  F  Y  T  G  S  T  K  Y  K  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  K 
                    Query_9260   91   TGGCTTGGCCATATCTTTTACACTGGGAGCACCAAATACAAGCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCCAGGAAG  180
V  92.1% (223/242)  IGHV4-59*01  139  ...A....GT......A.....G............C.....C..........................A...G............A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  S  Y  Q  G  W 
                    Query_9260   181  CAGTTCTCCCTGAAACTGCGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGG  270
V  92.1% (223/242)  IGHV4-59*01  229  ..............G...A.C.........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (15/15)   IGHD3-10*01  11   ------------------------------------------------------------------...............---------  25

                                      -------->                                  
                                       L  P  P  W  G  L  G  R  L  V  I  V  P  S  
                    Query_9260   271  CTCCCCCCCTGGGGCCTGGGAAGACTGGTCATCGTCCCCTCAG  313
J  86.8% (33/38)    IGHJ5*02     14   -----...........A.....CC.......C....T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_63982

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-22*01                                                                                           25.7    0.003
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	AGGC	AGTAGTGGTTATT	GG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTCGACCCC	ARGGSSGYWWFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  V  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_9261   1    ACCCTGTCCCTCACCTGCGTTGTTTATGGTGGGTCTTTCAGTGGCTACTATTGGAGCTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (233/245)  IGHV4-34*01  49   ...................C...C...........C........T.....C..................C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  Q  S  G  G  T  N  Y  N  P  S  L  K  S  R  V  I  I  S  L  D  T  S  K  N 
                    Query_9261   91   TGGATTGGGGAAATCAATCAAAGTGGAGGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCACTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  ....................T......A....................................C.......G.................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  S  S  G  Y  W  W  F 
                    Query_9261   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTATATTATTGTGCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTC  270
V  95.1% (233/245)  IGHV4-34*01  229  ...............................................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (13/13)   IGHD3-22*01  14   ---------------------------------------------------------------------.............--------  26
J  93.5% (43/46)    IGHJ5*02     6    ------------------------------------------------------------------------------------......  11

                                      ----->                                  
                                       D  P  W  G  Q  A  I  P  V  T  V  S  S  
                    Query_9261   271  GACCCCTGGGGCCAGGCAATCCCGGTCACCGTCTCCTCAG  310
J  93.5% (43/46)    IGHJ5*02     12   ................G..C..T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_279938

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            322     2e-90
IGHD6-13*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACCTGGTACTCGGGGTTTTGACTAC	ARHLGTPGTRGFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	27	22	2	3	81.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	246	228	15	3	92.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_9262   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  87
V  92.7% (228/246)  IGHV4-4*02   49   ..................G............G.....T........GTA.......................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  S  Y  H  S  G  R  T  N  Y  N  A  S  F  Q  S  R  V  T  I  S  V  D  T  S  K 
                    Query_9262   88   GAGTGGATTGGGGAATCCTATCATAGTGGGCGCACCAACTACAACGCGTCCTTCCAGAGTCGAGTCACCATATCAGTAGACACGTCCAAG  177
V  92.7% (228/246)  IGHV4-4*02   139  ...............AT.............A..............C.....C..A...........................A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  P  G  T  R 
                    Query_9262   178  AATCAATTCTCCCTGAATCTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACCTGGTACTCGG  267
V  92.7% (228/246)  IGHV4-4*02   229  ..C..G...........G....G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9262   268  GGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (43/43)   IGHJ4*02     6    ---...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_57506

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	T	AGTGGCTGG	GACCACGTCTCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAGTGGCTGGGACCACGTCTCT	AKDSGWDHVS	249	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	21	3	6	70
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	235	15	6	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9263   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACATTTAACACCTATGGCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.8% (235/256)  IGHV3-23*01  47   ............................T........C....G..G.....C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  S  G  I  S  S  S  D  G  G  G  R  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  
                    Query_9263   91   AGTGGGTCTCAGGTATCAGTAGTAGTGATGGTGGTGGTCGCACAGACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACA  180
V  91.8% (235/256)  IGHV3-23*01  137  ............C...T...G......------.....A.....T.............................................  220
                                      E  W  V  S  A  I  S  G  S        G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--
                                      I  A  K  N  T  L  Y  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  K  D  S  G  W  D  
                    Query_9263   181  TTGCCAAGAACACACTGTATCTGCAAATGAACAGCCTGAGAGCCGGCGACACGGCCGTATATTACTGTGCGAAAGATAGTGGCTGGGACC  270
V  91.8% (235/256)  IGHV3-23*01  221  A.T..........G...............................AG.............................--------------  296
                                      N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                 
D  100.0% (9/9)     IGHD6-19*01  10   -----------------------------------------------------------------------------.........----  18

                                      ------->                                  
                                      H  V  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9263   271  ACGTCTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (34/34)   IGHJ4*02     15   --------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_161834

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           288     5e-80
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCCGC	TTTTTGAGTGG	ATACGAGGGGGGCTGTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCGCTTTTTGAGTGGATACGAGGGGGGCTGTCTTGATTCC	ARLRFLSGYEGGCLDS	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	216	32	0	87.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  G  A  S  G  G  T  F  G  P  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9264   1    GGTCCCTGAGACTCTCCTGTGGAGCCTCTGGAGGCACCTTCGGTCCCTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.1% (216/248)  IGHV3-21*01  47   .....................C..........TT.......A..AG......C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  T  S  G  D  H  T  F  Y  A  D  S  V  K  G  R  F  T  T  S  R  D  N  A  
                    Query_9264   91   AGTGGGTCTCATCAGTGAGTACCAGTGGCGATCACACATTCTATGCGGACTCAGTGAAGGGCCGATTCACCACCTCGAGAGACAACGCCA  180
V  87.1% (216/248)  IGHV3-21*01  137  .............CA.T....GT...A.TAG.T...T..A...C..A.........................T...C.............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  V  L  Y  L  Q  M  N  R  L  T  V  E  D  T  A  V  Y  Y  C  A  R  L  R  F  L  S  G  Y  
                    Query_9264   181  AGAATGTCCTGTATCTGCAAATGAACCGCCTTACAGTCGAGGACACGGCTGTATATTACTGTGCGAGACTCCGCTTTTTGAGTGGATACG  270
V  87.1% (216/248)  IGHV3-21*01  227  ....CTCA..................A....G.G..C...............G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD3-3*01   11   --------------------------------------------------------------------------....G......-----  21

                                      T------------------>                                  
                                      E  G  G  C  L  D  S  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_9264   271  AGGGGGGCTGTCTTGATTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  324
J  92.9% (39/42)    IGHJ4*02     7    ------------....C.A...............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_161835

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           248     7e-68
IGHD3-16*01                                                                                           12.2    30   
IGHJ6*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	TTGGGG	CACCGCCCCAGTATGGG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGGGGCACCGCCCCAGTATGGGATGGACGTC	ARVGAPPQYGMDV	230	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	16	8	0	66.7
FR2-IMGT	41	91	51	47	4	0	92.2
CDR2-IMGT	92	115	24	20	4	0	83.3
FR3-IMGT	116	229	114	97	17	0	85.1
CDR3-IMGT (germline)	230	236	7	7	0	0	100
Total	N/A	N/A	224	191	33	0	85.3


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  Y  T  F  S  D  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  I  I  W  F  D
                    Query_9265   13   GTCTGGGTACACATTTAGCGACTACGGCATGAACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCTATCATCTGGTTTGA  102
V  85.3% (191/224)  IGHV3-33*01  72   ......A.T...C..C..TAG...T......C...........................................AG.T..A....A...  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  K  Q  F  Y  G  D  S  V  R  G  R  F  T  I  S  K  D  N  S  K  N  T  V  S  L  Q  M  N
                    Query_9265   103  TGGAAGTAAGCAATTTTATGGGGACTCCGTGAGGGGCCGATTCACCATCTCCAAAGACAATTCCAAGAACACGGTGTCTCTACAAATGAA  192
V  85.3% (191/224)  IGHV3-33*01  162  .........TA...AC....CA..........A....................G...................C...A...G........  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------CDR3-IMGT-------------->              
                                        S  L  R  S  D  D  S  A  V  Y  Y  C  A  R  V  G  A  P  P  Q  Y  G  M  D  V  W  G  Q  G  T
                    Query_9265   193  CAGCCTGAGAAGTGACGATTCGGCTGTCTACTACTGTGCGAGAGTTGGGGCACCGCCCCAGTATGGGATGGACGTCTGGGGCCAAGGGAC  282
V  85.3% (191/224)  IGHV3-33*01  252  ..........GCC..G..CA.......G..T.............----------------------------------------------  295
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (6/6)     IGHD3-16*01  16   --------------------------------------------......----------------------------------------  21
J  100.0% (39/39)   IGHJ6*02     21   -------------------------------------------------------------------.......................  43

                                                      
                                        T  V  T  V  S 
                    Query_9265   283  CACGGTCACCGTCTCC  298
J  100.0% (39/39)   IGHJ6*02     44   ................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_161836

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           357     1e-100
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9266   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.6% (239/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  K  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_9266   91   CTCAAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  95.6% (239/250)  IGHV4-31*03  139  ..GG..............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G 
                    Query_9266   181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  95.6% (239/250)  IGHV4-31*03  229  .........................G................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9266   271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_161837

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            299     2e-83
IGHD6-19*01                                                                                           21.8    0.039
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGTG	GCAGTGGCTGG	ATA	ATGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGTGGCAGTGGCTGGATAATGGCCGTC	AGGSGWIMAV	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	218	27	0	89


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  S  T  F  R  N  L  W  M  S  W  V  R  Q  I  P  G  K  G  L  
                    Query_9267   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATCCACATTTAGAAACCTTTGGATGAGTTGGGTCCGCCAGATCCCAGGGAAGGGTCTGG  90
V  89.0% (218/245)  IGHV3-7*03   47   ............................T....T...C.....T.G.TA.........C............GCT...........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  M  A  D  I  N  E  D  G  S  E  I  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9267   91   AGTGGATGGCCGACATAAACGAAGATGGAAGTGAGATAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  89.0% (218/245)  IGHV3-7*03   137  .....G.....A.......GC...............A.T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  V  D  L  Q  M  N  S  L  G  V  E  D  S  A  V  Y  Y  C  A  G  G  S  G  W  I  M  A  
                    Query_9267   181  AAAATTCAGTGGATCTGCAGATGAACAGCCTGGGAGTCGAGGACTCGGCCGTGTATTATTGTGCGGGTGGCAGTGGCTGGATAATGGCCG  270
V  89.0% (218/245)  IGHV3-7*03   227  .G..C...C..T.......A............A...C.......A.............C......-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD6-19*01  8    ---------------------------------------------------------------------...........----------  18
J  95.2% (40/42)    IGHJ6*02     21   -----------------------------------------------------------------------------------....A..  27

                                      ->                                 
                                      V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_9267   271  TCTGGGGCCAAGGGGCCACGGTCACCGTCTCCTCA  305
J  95.2% (40/42)    IGHJ6*02     28   ..............A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_161830

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	CGTGCAGGGGTCGTTA	TACGATTTTTGGAGTGG	GTTCCTGGGA	CCCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACGTGCAGGGGTCGTTATACGATTTTTGGAGTGGGTTCCTGGGACCC	ANVQGSLYDFWSGFLGP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  Y  T  F  R  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9268   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATACACCTTTAGAAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (230/247)  IGHV3-23*01  47   .................................T.........C..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  S  G  S  N  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9268   91   AGTGGGTCTCAGTTATTAGTGGTAGTGGAAGTAACATATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  93.1% (230/247)  IGHV3-23*01  137  ............C...............TG...G..C................................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  S  A  I  Y  Y  C  A  N  V  Q  G  S  L  Y  D  
                    Query_9268   181  GGAATACCCTGTATCTTCAAATGAATACCCTGAGAGCCGAGGACTCGGCCATATATTACTGTGCGAACGTGCAGGGGTCGTTATACGATT  270
V  93.1% (230/247)  IGHV3-23*01  227  A...C..G........G........C.G................A.....G................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (17/17)   IGHD3-3*01   5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                      F  W  S  G  F  L  G  P  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_9268   271  TTTGGAGTGGGTTCCTGGGACCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  327
D  100.0% (17/17)   IGHD3-3*01   12   ..........-----------------------------------------------  21
J  97.3% (36/37)    IGHJ5*02     15   --------------------................C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_161831

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           313     2e-87
IGHD3-3*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCCA	GGAGTGG	GCGGACGGACG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCAGGAGTGGGCGGACGGACGCTACTTTGACTAC	ARLQEWADGRYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  E  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_9269   1    ACCCTGTCCCTCACCTGCGAAGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  91.0% (222/244)  IGHV4-59*08  49   ..................ACT...................G........................................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  S  Y  S  G  R  T  D  C  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_9269   91   TGGCTTGGGTATGTCTCTTATAGTGGGAGAACCGACTGCAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCGAAGAAC  180
V  91.0% (222/244)  IGHV4-59*08  139  ...A........A...A...C........C...A...A..............................A..............C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  Y  L  K  L  S  S  V  I  A  E  D  T  A  L  Y  Y  C  A  R  L  Q  E  W  A  D  G  R  Y 
                    Query_9269   181  CAATTCTACCTGAAACTGAGCTCTGTGATCGCCGAAGACACGGCCCTCTATTATTGTGCGAGACTCCAGGAGTGGGCGGACGGACGCTAC  270
V  91.0% (222/244)  IGHV4-59*08  229  ..G....C......G.............C.....C..........G.G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------------------------------------------------------------....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9269   271  TTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ4*02     6    .....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_161832

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-3*01                                                                                            10.3    118   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GCTTG	ACGAT	CGCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGCTTGACGATCGCATACTACTTTGACTAC	ATGLTIAYYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  P  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9270   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACCCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ...............................G.T........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  D  T  S 
                    Query_9270   91   CTAGAGTGGATTGGGTACATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTTACCATATCACTAGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..G.......................C...............................A...................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  D  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  L  T  I  A  Y  Y 
                    Query_9270   181  AAGGACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGCTTGACGATCGCATACTAC  270
V  96.0% (240/250)  IGHV4-31*03  229  ...A...............A.................................G.............G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-3*01   6    ---------------------------------------------------------------------------.....----------  10
J  95.8% (46/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_9270   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCTTCAG  313
J  95.8% (46/48)    IGHJ4*02     6    ..............................A.......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_161833

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            344     6e-97
IGHD3-10*01                                                                                           10.3    125  
IGHJ3*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GAAT	TTATA	N/A	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGAATTTATAATGGTTTTGATGTC	ARGIYNGFDV	269	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	38	7	0	84.4
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	154	27	21	6	0	77.8
FR3-IMGT	155	268	114	105	9	0	92.1
CDR3-IMGT (germline)	269	275	7	7	0	0	100
Total	N/A	N/A	274	247	27	0	90.1


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  L  I  T  C  D  I  T  R  D  S  V  S  S  N  T  V  A  W  N  W  I  R 
                    Query_9271   2    CTGGTGAAACCCACACAGACCCTCTTAATCACCTGTGACATCACCAGGGACAGTGTCTCTAGTAACACTGTTGCTTGGAATTGGATCAGG  91
V  90.1% (247/274)  IGHV6-1*01   31   ........G...T.G..........C.C.........C....T..G................C....G..C.........C.........  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  R  S  D  Y  A  P  S  V  K  S  R 
                    Query_9271   92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATATTACAGATCCAAGTGGCGTTCTGACTATGCACCATCTGTGAAAAGTCGG  181
V  90.1% (247/274)  IGHV6-1*01   121  .........................................C.....G.........TA.AA...T......GT...............A  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  V  N  P  D  T  S  K  N  Q  F  S  L  H  L  N  S  V  T  P  E  D  T  A  I  Y  Y  C  A 
                    Query_9271   182  ATAACCGTCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTATTTATTATTGTGCA  271
V  90.1% (247/274)  IGHV6-1*01   211  ......A.....................................G..............................G.G.....C......  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------CDR3-IMGT--------->                                  
                                       R  G  I  Y  N  G  F  D  V  W  G  P  G  T  S  V  T  V  S  S  
                    Query_9271   272  AGAGGAATTTATAATGGTTTTGATGTCTGGGGCCCAGGGACATCGGTCACCGTCTCTTCAG  332
V  90.1% (247/274)  IGHV6-1*01   301  ....---------------------------------------------------------  304
                                       R                                                           
D  100.0% (5/5)     IGHD3-10*01  25   --------.....------------------------------------------------  29
J  91.7% (44/48)    IGHJ3*01     3    -------------...C.................A.......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_250938

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9272   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  98.4% (239/243)  IGHV4-59*01  49   ......................................................................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9272   91   TGGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  .........T................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_9272   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (18/20)    IGHD5-18*01  1    ----------------------------------------------------------------..........C.....T...------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9272   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_250939

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           349     3e-98
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAG	GACCCCCCC	ATTACTATGATA	CTGATGGTCCCTATGCGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAAAGGACCCCCCCATTACTATGATACTGATGGTCCCTATGCGAACTAC	VKGPPHYYDTDGPYANY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  L  R  F  S  I  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9273   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTACGCTTCAGTATCTATACTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  94.8% (236/249)  IGHV3-64*05  47   ..................................CAC........G....G.......................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  S  N  G  G  R  T  Y  Y  P  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9273   91   AATATGTTTCAGCTATTAGCAGTAATGGGGGTAGAACATACTACCCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (236/249)  IGHV3-64*05  137  ...................T..............C.........G.............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K  G  P  P  H  Y  Y  D  
                    Query_9273   181  AGAACACGCTGTATCTTCAAATGAACAGTCTGAGAGCTGAGGACACGGCTGTATATTATTGTGTCAAAGGACCCCCCCATTACTATGATA  270
V  94.8% (236/249)  IGHV3-64*05  227  ..............G.........G...........................G.....C.....G....---------------------  295
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (12/12)   IGHD3-22*01  3    ------------------------------------------------------------------------------............  14

                                      GT-------------------->                                 
                                      T  D  G  P  Y  A  N  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_9273   271  CTGATGGTCCCTATGCGAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  326
J  100.0% (38/38)   IGHJ4*02     10   ------------------......................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_185800

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           408     4e-116
IGHD1-26*01                                                                                           10.3    131   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTCAC	GTGGG	GCTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTCACGTGGGGCTGCTTTGGCTAC	ARGLTWGCFGY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_9274   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  95.2% (275/289)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  F  A  Q 
                    Query_9274   92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTTTGCACAG  181
V  95.2% (275/289)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_9274   182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.2% (275/289)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  G  L  T  W  G  C  F  G  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_9274   272  ATATATTACTGTGCGAGAGGTCTCACGTGGGGCTGCTTTGGCTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  95.2% (275/289)  IGHV1-18*01  277  G.G................------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  95.5% (42/44)    IGHJ4*02     5    -----------------------------------.....A.................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_63986

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           305     3e-85
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAAC	TATTACTATGGTTCGGGG	GCCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAACTATTACTATGGTTCGGGGGCCCACTTTGACTAC	ARGNYYYGSGAHFDY	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	40	11	0	78.4
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	222	27	0	89.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  K  S  G  G  F  Y  L  S  W  V  R  P  P  P  R  E  G  
                    Query_9275   4    CCCTGAGACTCTCCTGCACTGTTTCTGGTGGCTCCATTAAGAGTGGCGGTTTCTACTTGAGCTGGGTCCGCCCGCCCCCCCGGGAGGGGC  93
V  89.2% (222/249)  IGHV4-31*01  50   .....TCC...A..........C..............C.GC.....T....A.....G.......A......A..A...AG..A....C.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      P  G  W  I  G  F  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  P  S  
                    Query_9275   94   CGGGGTGGATTGGGTTCATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACCCCTCTA  183
V  89.2% (222/249)  IGHV4-31*01  140  T..A...........A...................................................................A.G....  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  R  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  N  Y  Y  Y  G  S  
                    Query_9275   184  AGAACCGGTTCTCCCTGAAGTTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGAACTATTACTATGGTTCGG  273
V  89.2% (222/249)  IGHV4-31*01  230  ......A.............C...GC...........................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-10*01  2    --------------------------------------------------------------------------................  17

                                      ---------------->                                  
                                      G  A  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9275   274  GGGCCCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (18/18)   IGHD3-10*01  18   ..-------------------------------------------------  19
J  100.0% (45/45)   IGHJ4*02     4    ------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_250930

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           349     3e-98
IGHD3-10*01                                                                                           12.2    37   
IGHJ4*03                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ4*03	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAACA	TGTCATGTA	TCGGGG	GGGTCGCTTGGA	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATGTCATGTATCGGGGGGGTCGCTTGGACTACTTTGACTCC	AKHVMYRGGRLDYFDS	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	67	7	0	90.5
CDR1-IMGT	76	99	24	17	7	0	70.8
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	18	6	0	75
FR3-IMGT	175	288	114	103	11	0	90.4
CDR3-IMGT (germline)	289	296	8	7	1	0	87.5
Total	N/A	N/A	295	259	36	0	87.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  P  L  R  I  S  C  K  G  S  G  N  T  F  T  
                    Query_9276   2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGCCTCTGAGGATTTCCTGTAAGGGGTCTGGAAACACTTTCACCA  91
V  87.8% (259/295)  IGHV5-51*01  2    ..G...............................A........G...T......A...C...........T......T...GC..T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  S  W  I  A  W  V  R  Q  L  P  E  K  G  L  E  W  M  G  I  V  F  P  D  D  S  D  T  I  Y  
                    Query_9276   92   CCTCGTGGATCGCCTGGGTGCGCCAGCTGCCCGAGAAAGGCCTGGAGTGGATGGGCATCGTCTTTCCTGATGATTCAGACACCATATACA  181
V  87.8% (259/295)  IGHV5-51*01  92   G..AC.......G.............A......G.....................G...A...A.....G...C..T..T....G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  Q  G  L  I  T  I  S  A  D  K  S  L  K  T  A  Y  L  Q  W  S  S  L  K  P  S  D  
                    Query_9276   182  ATCCGTCCTTCCAAGGCCTGATCACCATCTCGGCCGACAAGTCCCTCAAGACCGCCTACCTGCAGTGGAGCAGCCTGAAGCCCTCGGACA  271
V  87.8% (259/295)  IGHV5-51*01  182  GC................A.G..........A............A...GC..............................G.........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      T  A  I  Y  Y  C  A  K  H  V  M  Y  R  G  G  R  L  D  Y  F  D  S  W  G  Q  G  T  L  V  I  
                    Query_9276   272  CCGCCATATATTACTGTGCGAAACATGTCATGTATCGGGGGGGTCGCTTGGACTACTTTGACTCCTGGGGCCAAGGGACCCTGGTCATCG  361
V  87.8% (259/295)  IGHV5-51*01  272  .......G.............G...-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD3-10*01  14   ----------------------------------......--------------------------------------------------  19
J  91.5% (43/47)    IGHJ4*03     2    ----------------------------------------------------...........A.......................C..  39

                                               
                                      A  S  S  
                    Query_9276   362  CCTCTTCAG  370
J  91.5% (43/47)    IGHJ4*03     40   T...C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_250932

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           330     9e-93
IGHD3-10*01                                                                                           12.2    30   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGATCGGG	ATC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGATCGGGATCCTAC	SSGSGSY	246	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	250	5	3	2	0	60
Total	N/A	N/A	247	229	18	0	92.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G  
                    Query_9277   4    CCCTGAGACTCTCCTGTACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  92.7% (229/247)  IGHV4-39*01  50   .....TCC...A....C.....C.....................AG..............G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S  
                    Query_9277   94   TGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCCA  183
V  92.7% (229/247)  IGHV4-39*01  140  ....................T..........................C.........A..................C.............  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  S  G  S  Y  W  G  
                    Query_9277   184  AGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGATCGGGATCCTACTGGGGCC  273
V  92.7% (229/247)  IGHV4-39*01  230  .................A.......C................................C...G.G..-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  88.9% (8/9)      IGHD3-10*01  10   -------------------------------------------------------------------...T.....--------------  18
J  97.3% (36/37)    IGHJ4*02     11   -------------------------------------------------------------------------------...........  21

                                                                
                                      Q  G  T  L  V  S  V  S  S 
                    Query_9277   274  AGGGAACCCTGGTCTCCGTCTCCTCA  299
J  97.3% (36/37)    IGHJ4*02     22   ..............A...........  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_250933

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           324     7e-91
IGHD1-1*01                                                                                            10.3    113  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATAAG	GACGGCGGGCGT	TGGAA	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ATAAGGACGGCGGGCGTTGGAAAC	IRTAGVGN	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	247	5	3	2	0	60
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  S  F  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9278   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGTAGTTTCTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  91.9% (227/247)  IGHV3-74*01  47   ....................................C.........C.A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  S  S  D  G  S  S  R  N  Y  A  D  S  V  K  G  R  V  T  I  S  R  D  N  A  
                    Query_9278   91   TGTGGGTCTCACGTATTAGTAGTGATGGGAGTAGTAGAAACTACGCGGACTCCGTGAAGGGCCGAGTCACCATCTCCAGAGACAACGCCA  180
V  91.9% (227/247)  IGHV3-74*01  137  ..................A...............C.C..G.........................T........................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      K  N  T  V  Y  L  Q  M  N  N  L  R  G  E  D  T  G  V  Y  Y  C  I  R  T  A  G  V  G  N  W  
                    Query_9278   181  AGAACACGGTCTATTTGCAAATGAATAACTTGAGAGGCGAGGACACGGGTGTGTATTATTGTATAAGGACGGCGGGCGTTGGAAACTGGG  270
V  91.9% (227/247)  IGHV3-74*01  227  ........C.G...C..........C.GTC......C...........C.........C...GC...-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD1-1*01   9    -------------------------------------------------------------------------------.....------  13
J  97.2% (35/36)    IGHJ4*02     13   ------------------------------------------------------------------------------------......  18

                                                                    
                                      G  Q  G  T  L  V  T  V  P  S  
                    Query_9278   271  GCCAGGGAACCCTGGTCACCGTCCCCTCAG  300
J  97.2% (35/36)    IGHJ4*02     19   .......................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_250934

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           304     1e-84
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGGGGCCT	TATAGTGGGAGC	CCTCAATGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGGGGCCTTATAGTGGGAGCCCTCAATGGTACTTTTACTTC	AKPGPYSGSPQWYFYF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	221	27	0	89.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  T  L  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9279   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTAACCTTTAGCACCTTGGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.1% (221/248)  IGHV3-23*01  47   ..................................C..........G..AT........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  I  I  T  V  T  G  R  N  Y  Y  Y  A  D  S  V  K  V  P  F  I  I  S  R  Y  K  S  
                    Query_9279   91   AGTGGGTCTCAATTATTACTGTGACTGGTCGTAATTATTACTACGCAGACTCCGTGAAGGTCCCCTTCATCATCTCCAGATACAAGTCCA  180
V  89.1% (221/248)  IGHV3-23*01  137  ...........GC.....G..GT.G....G...GCACA......................G..GG....C..........G....T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  L  Y  Y  C  A  K  P  G  P  Y  S  G  S  
                    Query_9279   181  AGAACACTCTGTATCTGCAAATGAACACCCTGAGGGCCGAGGACACGGCCTTATATTACTGTGCGAAACCGGGGCCTTATAGTGGGAGCC  270
V  89.1% (221/248)  IGHV3-23*01  227  .......G...................G......A...............G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD1-26*01  3    -----------------------------------------------------------------------------............-  14

                                      T------------------>                                 
                                      P  Q  W  Y  F  Y  F  W  G  Q  G  T  L  V  T  F  S  S 
                    Query_9279   271  CTCAATGGTACTTTTACTTCTGGGGCCAGGGAACCCTGGTCACCTTCTCCTCA  323
J  93.3% (42/45)    IGHJ4*02     3    --------......G...A.........................G........  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_250937

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD2-2*01                                                                                            10.3    117  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GA	ATGCC	CTTAAACCTTCATCCCTTT	GACCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGCCCTTAAACCTTCATCCCTTTGACCCC	ARMPLNLHPFDP	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9280   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCACCTTTACCACCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.7% (233/246)  IGHV3-23*01  47   ......................A...................G..G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  A  G  S  G  S  G  P  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9280   91   AGTGGGTCTCAGCTATTGCTGGTAGTGGTAGTGGCCCATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.7% (233/246)  IGHV3-23*01  137  .................AG..........G..A..A......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  N  R  L  R  A  E  D  T  A  V  Y  F  C  A  R  M  P  L  N  L  H  P  
                    Query_9280   181  AGAACACGCTGTATCTGCAGATGAACCGCCTGAGAGCCGAGGACACGGCCGTATATTTTTGTGCGAGAATGCCCTTAAACCTTCATCCCT  270
V  94.7% (233/246)  IGHV3-23*01  227  ...................A......A..............................AC.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-2*01   27   --------------------------------------------------------------------.....-----------------  31

                                      ------->                                  
                                      F  D  P  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_9280   271  TTGACCCCTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  312
J  97.5% (39/40)    IGHJ5*02     12   --...........................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_63988

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           353     9e-100
IGHD5-18*01                                                                                           14.1    7.9   
IGHJ4*02                                                                                              75.7    5e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	235	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  T  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9281   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCACCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (235/244)  IGHV4-59*01  49   .................................T........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  A  K  N 
                    Query_9281   91   TGGGTTGGGTATATCTATTACAGAGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGGCCAAGAAT  180
V  96.3% (235/244)  IGHV4-59*01  139  ...A...................T....G....................................................T.......C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_9281   181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  96.3% (235/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_9281   271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_57501

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           353     9e-100
IGHD2-15*01                                                                                           12.2    32    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAT	TAGCTG	TATCCGCGCCCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTAGCTGTATCCGCGCCCTACTACTTTGACTAC	ARRLAVSAPYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  T  N  S  N  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_9282   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCACCAATAGTAATTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.2% (238/250)  IGHV4-39*01  49   ...............................G........G..G.....G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9282   91   CTGGAGTGGATTGCGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  95.2% (238/250)  IGHV4-39*01  139  .............G..................................................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  V  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  R  L  A  V  S  A  P 
                    Query_9282   181  AAGAACCAGTTCTCCCTGAGGGTGACCTCTGTGACCGCCGCAGACACGGCTCTATATTACTGTGCGAGACGATTAGCTGTATCCGCGCCC  270
V  95.2% (238/250)  IGHV4-39*01  229  ...................A.C...G.........................G.G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-15*01  19   -------------------------------------------------------------------------......-----------  24

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  S  L  V  A  V  S  S  
                    Query_9282   271  TACTACTTTGACTACTGGGGCCAGGGATCCCTGGTCGCCGTCTCCTCAG  319
J  95.8% (46/48)    IGHJ4*02     1    -..........................A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_34869

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            364     5e-103
IGHD3-3*01                                                                                            16.1    2.2   
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	GGCT	ATTTTAGGAGT	TCGTCCTGGGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATGGCTATTTTAGGAGTTCGTCCTGGGGCTGGTTCGACCCC	AKDGYFRSSSWGWFDP	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	251	9	9	0	0	100
Total	N/A	N/A	251	242	9	0	96.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  R  A  P  G  K  G  L  
                    Query_9283  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCGAGCTCCAGGGAAGGGCCTGG  90
V  96.4% (242/251)  IGHV3-9*01  47   .....................................................................A....................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  Y  I  S  W  N  S  G  S  I  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_9283  91   AGTGGGTCTCTTATATTAGTTGGAATAGTGGTAGTATAGACTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  96.4% (242/251)  IGHV3-9*01  137  ..........AGG.....................C....G..............................................G...  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  F  C  A  K  D  G  Y  F  R  S  S  
                    Query_9283  181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGACCTGAGGACACGGCCTTGTATTTCTGTGCAAAAGATGGCTATTTTAGGAGTTCGT  270
V  96.4% (242/251)  IGHV3-9*01  227  ...................................G.....................A.............-------------------  297
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  90.9% (10/11)    IGHD3-3*01  9    ---------------------------------------------------------------------------.....T.....----  19

                                     T------------------>                                  
                                     S  W  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9283  271  CCTGGGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (47/47)   IGHJ5*02    5    -------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_34867

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           344     6e-97
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGTCGTC	ATTACGATTTTTGGAGTGGTT	TTGACGCCACGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGTCGTCATTACGATTTTTGGAGTGGTTTTGACGCCACGTACTACTTTGACTTC	ARGRHYDFWSGFDATYYFDF	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  H  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9284   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTCACTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*08  49   .............................................T...A........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  D  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_9284   91   TGGATTGGGTATATCGACTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAGAGC  180
V  95.5% (231/242)  IGHV4-59*08  139  ...............T.T...............A..................................A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       H  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  H  Y  D  F  W  S  G 
                    Query_9284   181  CACTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTTTATTACTGTGCGAGGGGTCGTCATTACGATTTTTGGAGTGGT  270
V  95.5% (231/242)  IGHV4-59*08  229  ..G...........G....G...........................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (21/21)   IGHD3-3*01   3    ----------------------------------------------------------------------....................  22

                                      GT------------------------>                                  
                                       F  D  A  T  Y  Y  F  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9284   271  TTTGACGCCACGTACTACTTTGACTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  331
D  100.0% (21/21)   IGHD3-3*01   23   .------------------------------------------------------------  23
J  95.8% (46/48)    IGHJ4*02     1    -------------............A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_34866

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           313     2e-87
IGHD2-2*01                                                                                            18.0    0.62 
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGGGGGGGGGG	ATTGCAGTAGTA	AAACCTGCC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGGGGGGGGGGATTGCAGTAGTAAAACCTGCCACTTCTCCTACGGTCTGGACGTC	TRSGGGDCSSKTCHFSYGLDV	246	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	251	6	5	1	0	83.3
Total	N/A	N/A	248	224	24	0	90.3


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  R  V  G  Y  Y  W  N  W  V  R  Q  H  P  G  K  G  
                    Query_9285   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAATCGTGTCGGTTACTACTGGAACTGGGTCCGCCAGCACCCCGGGAAGGGCC  93
V  90.3% (224/248)  IGHV4-31*01  50   .....TCC...A....C......................GCA...GT.............G....A.............A..........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  G  G  R  I  Y  Y  N  P  S  L  K  S  L  V  T  M  S  V  D  T  S  
                    Query_9285   94   TGGAGTGGATTGGGTACATCTATTACGGTGGGAGGATCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATGTCAGTAGACACGTCTA  183
V  90.3% (224/248)  IGHV4-31*01  140  ..........................A.......C.C....................................A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  Q  F  S  L  K  V  N  S  V  S  P  A  D  T  A  V  Y  Y  C  T  R  S  G  G  G  D  C  S  
                    Query_9285   184  AGAACCAGTTCTCCCTGAAGGTGAATTCTGTGAGTCCCGCGGACACGGCCGTCTATTACTGTACGAGATCAGGGGGGGGGGATTGCAGTA  273
V  90.3% (224/248)  IGHV4-31*01  230  ....................C...GC.......C.G................G.........G.....----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD2-2*01   6    ---------------------------------------------------------------------------------....T....  14

                                      DR3-IMGT-------------------------->                                 
                                      S  K  T  C  H  F  S  Y  G  L  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_9285   274  GTAAAACCTGCCACTTCTCCTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  341
D  91.7% (11/12)    IGHD2-2*01   15   ...-----------------------------------------------------------------  17
J  92.9% (52/56)    IGHJ6*02     7    ------------...A..A.......A.............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_34865

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            419     2e-119
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	TCGG	TACTATGGTTCGGGGAGTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGTCGGTACTATGGTTCGGGGAGTTATTACTTTGACTAC	AHSRYYGSGSYYFDY	263	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	30	0	0	100
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	113	1	0	99.1
CDR3-IMGT (germline)	263	270	8	8	0	0	100
Total	N/A	N/A	270	269	1	0	99.6


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R
                    Query_9286   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCG  90
V  99.6% (269/270)  IGHV2-5*01   30   ..........................................................................................  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T
                    Query_9286   91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCAC  180
V  99.6% (269/270)  IGHV2-5*01   120  ..........................................................................................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  V  P  V  D  T  A  T  Y  Y  C  A  H  S
                    Query_9286   181  CATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGTCCCTGTGGACACAGCCACATATTACTGTGCACACAG  270
V  99.6% (269/270)  IGHV2-5*01   210  .....................................................A....................................  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                      ----------CDR3-IMGT----------------->                                  
                                        R  Y  Y  G  S  G  S  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9286   271  TCGGTACTATGGTTCGGGGAGTTATTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  341
D  100.0% (21/21)   IGHD3-10*01  5    ----.....................----------------------------------------------  25
J  100.0% (46/46)   IGHJ4*02     3    -------------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_34864

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD3-3*01                                                                                            16.1    2.3  
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGGGAGGCGG	TTACGATT	CTATCCTCGGT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGGAGGCGGTTACGATTCTATCCTCGGTCTACGACTACGCTATGGACGTC	ASGEAVTILSSVYDYAMDV	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	225	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  N  F  Y  W  S  W  I  R  Q  P  P  G  R  G  L  E  
                    Query_9287   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAATTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAGT  93
V  93.4% (225/241)  IGHV4-59*01  50   .....TCC...A....C.........................G..A................................A...........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  S  I  Y  Y  S  G  R  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N  
                    Query_9287   94   GGATTGGGTCTATTTATTACAGTGGGAGGACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCGTATCAGTTGACACGTCCAAGAACC  183
V  93.4% (225/241)  IGHV4-59*01  140  .........A...C..............C....................................A.......A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  S  G  E  A  V  T  I  L  S  S  
                    Query_9287   184  AGTTCTCCCTGAAGCTGACCTCTATGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGCGGGGAGGCGGTTACGATTCTATCCTCGG  273
V  93.4% (225/241)  IGHV4-59*01  230  ..................G....G............................C........-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (8/8)     IGHD3-3*01   4    ------------------------------------------------------------------------........----------  11

                                      ---------------------->                                 
                                      V  Y  D  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9287   274  TCTACGACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  96.4% (53/55)    IGHJ6*02     8    -....T......G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_34862

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         414     5e-118
IGHD1-26*01                                                                                           10.3    137   
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATGCCTCCACCCGTAC	GTGGG	GTTTTC	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGCCTCCACCCGTACGTGGGGTTTTCACAACTGGTTCGACCCC	ARHASTRTWGFHNWFDP	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  N  T  F  T  S  Y
                    Query_9288     1    GCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGAAACACCTTTACCAGCTA  90
V  95.8% (277/289)  IGHV5-10-1*01  6    ........................G................................................T...G............  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  T  D  S  Y  P  D  Y  S  P
                    Query_9288     91   CTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTACTGACTCTTATCCCGACTACAGTCC  180
V  95.8% (277/289)  IGHV5-10-1*01  96   .................................................................G..........A..A.......C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  P  I  S  P  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  A
                    Query_9288     181  GTCCTTCCAAGGCCACGTCCCCATCTCCCCTGACAAGTCCATCAGCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACCCCGC  270
V  95.8% (277/289)  IGHV5-10-1*01  186  ...................A.......AG........................................................A....  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------------CDR3-IMGT-------------------->                          
                                          I  Y  Y  C  A  R  H  A  S  T  R  T  W  G  F  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V
                    Query_9288     271  CATATATTACTGTGCGAGACATGCCTCCACCCGTACGTGGGGTTTTCACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGT  360
V  95.8% (277/289)  IGHV5-10-1*01  276  ...G...............-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD1-26*01    7    ------------------------------------.....-------------------------------------------------  11
J  100.0% (51/51)   IGHJ5*02       1    -----------------------------------------------...........................................  43

                                                
                                          S  S  
                    Query_9288     361  CTCCTCAG  368
J  100.0% (51/51)   IGHJ5*02       44   ........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_34861

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           347     7e-98
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	C	GGGACTTATGC	CAACTCGCCA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGACTTATGCCAACTCGCCATACTGGTACTTCGATCTC	ASGTYANSPYWYFDL	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9289   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCGGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*02  49   ...................C...........G.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  T  G  S  A  Y  H  N  P  S  L  E  S  R  V  T  M  S  V  D  T  S 
                    Query_9289   91   CTGGAGTGGATTGCGAGTATCTATTATACTGGGAGCGCCTACCACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*02  139  .............G..............G.......A.....T..............A................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       N  N  H  F  S  L  Q  L  S  S  V  T  D  A  D  T  A  V  Y  Y  C  A  S  G  T  Y  A  N  S  P 
                    Query_9289   181  AACAACCACTTCTCCCTGCAGCTGAGCTCTGTGACCGACGCAGACACGGCTGTCTATTACTGTGCGAGCGGGACTTATGCCAACTCGCCA  270
V  94.8% (235/248)  IGHV4-39*02  229  ..G...............A..................C...............G..............----------------------  296
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.9% (10/11)    IGHD3-16*01  20   ---------------------------------------------------------------------....G......----------  30

                                      ----------------->                                  
                                       Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9289   271  TACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  322
J  100.0% (52/52)   IGHJ2*01     2    ....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_34860

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           330     1e-92
IGHD3-22*01                                                                                           16.1    2.5  
IGHJ3*01                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGATCCCTT	CTATGATA	CTACAGGAAGTTATTCCTTTGACCTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACATATGGATCCCTTCTATGATACTACAGGAAGTTATTCCTTTGACCTT	VRHMDPFYDTTGSYSFDL	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	43	8	0	84.3
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	93	21	0	81.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	251	40	0	86.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  V  S  G  Y  R  F  T  S  K
                    Query_9290   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGAGTCTCTGGATACAGGTTTACCAGCAA  90
V  86.3% (251/291)  IGHV5-51*01  6    ....................................C.........................AG.GT...........C.........T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  T  W  V  R  H  M  P  G  Q  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_9290   91   ATGGATCACCTGGGTGCGCCACATGCCCGGACAGGGCCTGGAGTGGATGGGCGTCATCTATCCCGGAGACTCTGATACCAGATACAACCC  180
V  86.3% (251/291)  IGHV5-51*01  96   C......GG............G........GA.A.................GA..........T..T...................G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  R  I  S  I  S  A  D  E  S  T  N  T  A  S  L  H  W  G  F  L  R  A  S  D  T  A
                    Query_9290   181  GTCCTTCCAAGGCCGGATCAGCATTTCAGCCGACGAGTCCACCAACACTGCCTCTCTGCACTGGGGCTTCCTGCGGGCCTCGGACACTGC  270
V  86.3% (251/291)  IGHV5-51*01  186  ..............A.G...C...C.........A......T..G...C....AC.....G...A..AG....AA............C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        I  Y  Y  C  V  R  H  M  D  P  F  Y  D  T  T  G  S  Y  S  F  D  L  W  G  Q  G  T  M  V  T
                    Query_9290   271  CATATACTATTGTGTGAGACATATGGATCCCTTCTATGATACTACAGGAAGTTATTCCTTTGACCTTTGGGGCCAAGGGACAATGGTCAC  360
V  86.3% (251/291)  IGHV5-51*01  276  ...G..T..C....C......---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-22*01  7    ---------------------------------........-------------------------------------------------  14
J  97.1% (33/34)    IGHJ3*01     17   -------------------------------------------------------------------.......................  39

                                                 
                                        V  S  S  
                    Query_9290   361  CGTCTCCTCAG  371
J  97.1% (33/34)    IGHJ3*01     40   ......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_293754

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           367     5e-104
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	GGGTTG	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTTGGGTATGGACGTC	ARGLGMDV	244	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  S  S  G  S  H  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9291   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTCAGCAGTGGTAGTCACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  97.2% (242/249)  IGHV4-39*01  49   ....................................A........A.....T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  F  G  S  I  H  Y  R  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9291   91   CTGGAGTGGTTTGGGAGTATCCATTATAGGGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  97.2% (242/249)  IGHV4-39*01  139  .........A...........T.......T............................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>   
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  R  A  V  Y  Y  C  A  R  G  L  G  M  D  V  W 
                    Query_9291   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACAGGGCTGTGTATTACTGTGCGAGAGGGTTGGGTATGGACGTCTGG  270
V  97.2% (242/249)  IGHV4-39*01  229  ..............................................C......................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------...............  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_9291   271  GGCCAAGGGACCACGGTCACCGTCTCCTCA  300
J  100.0% (45/45)   IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_323209

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            380     1e-107
IGHD1-26*01                                                                                           12.2    36    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	71	4	0	94.7
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	100	14	0	87.7
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	269	26	0	91.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_9292   2    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACC  91
V  91.2% (269/295)  IGHV1-8*01   1    .....G.....G...........G...............................................T........C.........  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F 
                    Query_9292   92   ACTTATGATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTT  181
V  91.2% (269/295)  IGHV1-8*01   91   .G....................................A..G..............A..............C.G...T..........A.  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D 
                    Query_9292   182  GCACAGAGATTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGAC  271
V  91.2% (269/295)  IGHV1-8*01   181  .......AG...C............................C.....A.................GC............G..C..AG...  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                 
                                       T  A  I  Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_9292   272  ACGGCCATATATTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  358
V  91.2% (269/295)  IGHV1-8*01   271  ......G.G................--------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   ----------------------------------...G.....--------------------------------------------  18
J  100.0% (40/40)   IGHJ5*02     11   -----------------------------------------------........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_323208

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           420     7e-120
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ3*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AGGGG	AGTGGGAGC	CCCTTCTTAGAGGCA	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAAGGGGAGTGGGAGCCCCTTCTTAGAGGCACTTTTGATATC	AKEGEWEPLLRGTFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  S  A  V  K  V  A  C  K  A  S  G  G  T  F  S  N  Y
                    Query_9293   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGTCCGCGGTGAAAGTCGCCTGCAAGGCTTCTGGAGGCACCTTCAGCAACTA  90
V  96.2% (280/291)  IGHV1-69*01  6    ..................G..........A.............T.......G...T..............................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  F  F  G  T  A  N  Y  A  Q
                    Query_9293   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTTTCTTTGGTACAGCAAACTACGCACA  180
V  96.2% (280/291)  IGHV1-69*01  96   ....................................................G...........A.........................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  L  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_9293   181  GAGGTTGCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  96.2% (280/291)  IGHV1-69*01  186  ..A...C...................................................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  K  E  G  E  W  E  P  L  L  R  G  T  F  D  I  W  G  Q  G  T  M  V  I  V  S
                    Query_9293   271  CGTGTATTACTGTGCGAAAGAAGGGGAGTGGGAGCCCCTTCTTAGAGGCACTTTTGATATCTGGGGCCAAGGGACAATGGTCATCGTCTC  360
V  96.2% (280/291)  IGHV1-69*01  276  .................G...---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (9/9)     IGHD1-26*01  6    --------------------------.........-------------------------------------------------------  14
J  97.8% (44/45)    IGHJ3*02     6    --------------------------------------------------.................................C......  45

                                           
                                        S  
                    Query_9293   361  TTCAG  365
J  97.8% (44/45)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_99745

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           283     1e-78
IGHD3-10*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGGAGGGGGCTTCGGGACAG	TATTATAAC	GGACGACGGGGGACTC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGGAGGGGGCTTCGGGACAGTATTATAACGGACGACGGGGGACTCTGGACGTC	ARLEGASGQYYNGRRGTLDV	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	100	14	0	87.7
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	214	33	0	86.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  R  D  S  S  H  Y  W  V  W  I  R  Q  P  P  G  K  G  
                    Query_9294   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGAGACAGTAGTCACTACTGGGTCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  86.6% (214/247)  IGHV4-39*01  50   .....TCC...A....C.......................CAGT......T.........G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  T  I  R  Y  F  G  T  T  F  Y  R  P  S  L  K  S  R  V  T  M  S  M  D  T  S  
                    Query_9294   94   TGGAGTGGATTGGGACCATCCGTTACTTTGGGACCACCTTCTACAGGCCGTCACTCAAGAGTCGAGTCACCATGTCCATGGACACGTCGA  183
V  86.6% (214/247)  IGHV4-39*01  140  ...............GT...TA...TAG.....G.....A.....AC.....C....................A...G.A........C.  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  N  L  G  S  V  T  A  A  D  T  S  V  Y  Y  C  A  R  L  E  G  A  S  G  Q  
                    Query_9294   184  AGAACCAGTTCTCCCTGAACCTGGGGTCTGTGACCGCCGCAGACACGTCTGTGTACTATTGTGCGAGGCTGGAGGGGGCTTCGGGACAGT  273
V  86.6% (214/247)  IGHV4-39*01  230  ...................G...A.C.....................G.......T..C........-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD3-10*01  23   -----------------------------------------------------------------------------------------.  23

                                      R3-IMGT------------------------>                                 
                                      Y  Y  N  G  R  R  G  T  L  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_9294   274  ATTATAACGGACGACGGGGGACTCTGGACGTCTGGGGCCAAGGGGCCACGGTCACCGTCTCCTCA  338
D  100.0% (9/9)     IGHD3-10*01  24   ........---------------------------------------------------------  31
J  97.6% (40/41)    IGHJ6*02     22   ------------------------....................A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_323203

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           346     2e-97
IGHD3-9*01                                                                                            29.5    2e-04
IGHJ5*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATCCAC	GTATAACGATGTTTTGACTGG	CCAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATCCACGTATAACGATGTTTTGACTGGCCATAACTGGTTCGACCCC	ARGSTYNDVLTGHNWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  L  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9295   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCATTCTCAGTAGTTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-48*03  47   ....................G...............CCT...................C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  V  R  G  T  T  I  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  H  A  
                    Query_9295   91   AGTGGGTTTCATACATTAGTGTTAGAGGTACTACCATATACTACGCAGACTCTGTGCAGGGCCGATTTACCATCTCTAGAGACCACGCCA  180
V  94.4% (235/249)  IGHV3-48*03  137  ....................AG...T....G.........................A..........C........C......A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      T  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  S  T  Y  N  D  V  
                    Query_9295   181  CGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGATCCACGTATAACGATGTTT  270
V  94.4% (235/249)  IGHV3-48*03  227  A....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD3-9*01   1    ----------------------------------------------------------------------------....T.....A...  14

                                      IMGT--------------------->                                  
                                      L  T  G  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9295   271  TGACTGGCCATAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  90.5% (19/21)    IGHD3-9*01   15   .......-----------------------------------------------------  21
J  100.0% (49/49)   IGHJ5*02     3    -----------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_323200

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           210     1e-56
IGHD1-1*01                                                                                            12.2    34   
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTAGAGGGGGCTTCGGGACACAGT	TACAAC	GGACGGCGGGGGATTC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTAGAGGGGGCTTCGGGACACAGTTACAACGGACGGCGGGGGATTCTGGACGTC	ARVEGASGHSYNGRRGILDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	21	9	0	70
FR2-IMGT	58	108	51	43	8	0	84.3
CDR2-IMGT	109	129	21	11	10	0	52.4
FR3-IMGT	130	243	114	84	30	0	73.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	191	57	0	77


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  Y  S  Y  N  D  Y  W  A  W  V  R  Q  S  P  G  K  G 
                    Query_9296   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCTACAGTTATAATGATTATTGGGCCTGGGTCCGTCAGTCCCCGGGGAAGGGC  90
V  77.0% (191/248)  IGHV4-39*01  49   ...............................G.......AG....AG..G.T.C..C....G....A....C...C....A........G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  Y  H  S  R  G  S  S  S  Y  N  P  S  F  G  G  R  V  S  I  S  L  G  P  S 
                    Query_9296   91   CTGGAGTGGATTGGGACCTATCACTCTCGTGGCAGTTCCTCCTACAACCCATCTTTCGGGGGTCGAGTCTCTATTTCTCTAGGCCCGTCC  180
V  77.0% (191/248)  IGHV4-39*01  139  ................GTATCT.T.A.A....G..CA...A.........G..CC..AA.A........A.C..A..CG...A.A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       S  N  Q  I  S  L  Q  L  S  S  V  T  A  T  D  T  S  V  Y  F  G  A  R  V  E  G  A  S  G  H 
                    Query_9296   181  AGCAATCAAATCTCCCTGCAACTAAGTTCAGTGACCGCCACAGACACTTCTGTTTATTTCGGTGCGAGGGTAGAGGGGGCTTCGGGACAC  270
V  77.0% (191/248)  IGHV4-39*01  229  .AG..C..GT........A.G..G..C..T.........G.......GG....G....A.T.......----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      DR3-IMGT------------------------>                                 
                                       S  Y  N  G  R  R  G  I  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9296   271  AGTTACAACGGACGGCGGGGGATTCTGGACGTCTGGGGCCAGGGGACCACTGTCACCGTCTCCTCA  336
D  100.0% (6/6)     IGHD1-1*01   3    ---......---------------------------------------------------------  8
J  95.1% (39/41)    IGHJ6*02     22   -------------------------................A........G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_323207

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           333     1e-93
IGHD1-1*01                                                                                            14.1    8.4  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGGCCTT	TGGAACG	GGGGACTACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGGCCTTTGGAACGGGGGACTACCACTTTGACTAC	ARAPAFGTGDYHFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  I  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_9297   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCATCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-11*01  47   .....................C..............C.....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  G  S  G  S  R  I  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  G  N  A  
                    Query_9297   91   AGTGGCTTTCATACATTAGTGGTAGTGGTTCTAGGATCCACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGGCAACGCCG  180
V  92.8% (231/249)  IGHV3-11*01  137  .....G..............A........AG..CC..AT..........................................A.......A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  F  C  A  R  A  P  A  F  G  T  G  
                    Query_9297   181  AGAACTCCCTATATCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCCATTTATTTCTGTGCGAGAGCCCCGGCCTTTGGAACGGGGG  270
V  92.8% (231/249)  IGHV3-11*01  227  .......A..G..............C........................G.G....A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-1*01   9    -------------------------------------------------------------------------------.......----  15

                                      ---------------->                                  
                                      D  Y  H  F  D  Y  G  G  Q  G  A  P  V  T  V  S  S  
                    Query_9297   271  ACTACCACTTTGACTACGGGGGCCAGGGAGCCCCGGTCACCGTCTCCTCAG  321
J  93.3% (42/45)    IGHJ4*02     4    ------...........T...........A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_323206

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           360     1e-101
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ESFARVL*YYWS*SF*Y	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	30	30	29	0	1	96.7
CDR1-IMGT	31	54	24	21	3	0	87.5
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	129	24	24	0	0	100
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	242	7	1	96.8


Alignments

                                      <----------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT-------
                                         S  L  K  T  L  L  C  S  V  W  I  H  L  Q  S  L  W  H  A  L  G  P  P  G  S  R  Q  G  A  
                    Query_9298   1    GGTCCCTGAAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTG  90
V  96.8% (242/250)  IGHV3-33*01  47   .........-...................................AG..A........................................  135
                                         S  L   R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L 

                                      --------------><-------CDR2-IMGT------><--------------------------------------------------
                                      G  V  G  G  S  Y  M  V  *  W  K  *  *  I  L  C  R  L  R  E  G  P  I  H  H  L  Q  R  Q  C  
                    Query_9298   91   GAGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCC  180
V  96.8% (242/250)  IGHV3-33*01  136  .......................................................................................T..  225
                                       E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                      Q  E  H  V  V  S  A  N  E  Q  P  G  S  R  G  H  G  C  I  L  L  C  E  S  F  A  R  V  L  *  
                    Query_9298   181  AAGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGAT  270
V  96.8% (242/250)  IGHV3-33*01  226  .........C.......................A...................G................--------------------  295
                                       K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (16/18)    IGHD3-22*01  5    ---------------------------------------------------------------------------------.........  13

                                      -IMGT--------------------->                                  
                                      Y  Y  W  S  *  S  F  *  Y  L  G  P  R  D  N  T  H  R  L  F   
                    Query_9298   271  ACTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  331
D  88.9% (16/18)    IGHD3-22*01  14   .G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    -----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_323205

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           363     2e-102
IGHD1-26*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              106     3e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTTAAGATGCCAGACC	AGTGGGAGCTACT	CCGCGG	TTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTTAAGATGCCAGACCAGTGGGAGCTACTCCGCGGTTATTACTACTACTACGATATGGACGTC	AKDLKMPDQWELLRGYYYYYDMDV	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  F  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9299   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACATTTAGAAGCTTTGCCATGACCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-23*01  47   .....................................C.....C....A........G.....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9299   91   AGTGGGTCTCAGGTATTAGTGGTGGTGGGGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.4% (241/250)  IGHV3-23*01  137  ............C..........A....T.............................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  D  L  K  M  P  D  Q  
                    Query_9299   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAAAGATCTTAAGATGCCAGACCAGT  270
V  96.4% (241/250)  IGHV3-23*01  227  .........................................................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (13/13)   IGHD1-26*01  6    ---------------------------------------------------------------------------------------...  8

                                      ----CDR3-IMGT------------------------------>                                 
                                      W  E  L  L  R  G  Y  Y  Y  Y  Y  D  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9299   271  GGGAGCTACTCCGCGGTTATTACTACTACTACGATATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  347
D  100.0% (13/13)   IGHD1-26*01  9    ..........-------------------------------------------------------------------  18
J  96.7% (59/61)    IGHJ6*02     2    ----------------...C.............G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_323204

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           286     1e-79
IGHD3-16*01                                                                                           12.2    32   
IGHJ2*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGGCG	TGGGGG	GATCAAGGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGGCGTGGGGGGATCAAGGGATCCTGGTACTCCGATCTC	ARVRRGGIKGSWYSDL	239	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	10	1	0	90.9
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	48	3	0	94.1
CDR2-IMGT	101	124	24	16	8	0	66.7
FR3-IMGT	125	238	114	104	10	0	91.2
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	231	207	24	0	89.6


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  S  R  H  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  H  I  
                    Query_9300   15   GTACAGCCTCTGGATTCACCTTCAGTAGACATGAAATGAATTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGGAGTGGGTTTCACACATCA  104
V  89.6% (207/231)  IGHV3-48*03  65   ..G.........................TT..........C....................G.....................T....T.  154
                                         A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  T  G  S  T  L  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  A  N  S  L  Y  L  
                    Query_9300   105  GTACTGGTAGTACTCTAATAAATTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCGCGAATTCACTCTATCTGC  194
V  89.6% (207/231)  IGHV3-48*03  155  ...G.A..G...G.ACC...T.C................................................AA...C.....G.......  244
                                      S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  N  S  L  R  A  E  D  T  A  F  Y  Y  C  A  R  V  R  R  G  G  I  K  G  S  W  Y  S  D  
                    Query_9300   195  AAATGAACAGTCTGAGAGCCGAGGACACGGCTTTCTATTACTGCGCGAGAGTCCGGCGTGGGGGGATCAAGGGATCCTGGTACTCCGATC  284
V  89.6% (207/231)  IGHV3-48*03  245  ..........C.....................G.T........T.......---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------......--------------------------  22
J  94.0% (47/50)    IGHJ2*01     4    ----------------------------------------------------------------------------........T.....  17

                                      ->                                  
                                      L  W  G  R  G  T  L  V  V  V  S  S  
                    Query_9300   285  TCTGGGGCCGTGGCACCCTGGTCGTTGTCTCCTCAG  320
J  94.0% (47/50)    IGHJ2*01     18   .......................AC...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_291538

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           325     2e-91
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_9301   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  92.6% (226/244)  IGHV4-59*01  50   .....TCC...A....C.....................A...G...........G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N  
                    Query_9301   94   GGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACC  183
V  92.6% (226/244)  IGHV4-59*01  140  .......G..................A...............C...................................C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  V  N  L  R  S  V  T  A  V  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D  
                    Query_9301   184  AGTTCTCCGTGAACCTGAGATCTGTGACCGCTGTGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGACG  273
V  92.6% (226/244)  IGHV4-59*01  230  ........C....G.....C.............C............G...........G.....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  94.8% (55/58)    IGHJ6*02     5    -------------------------------------------------------------------.....AC................  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_9301   274  TCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  308
J  94.8% (55/58)    IGHJ6*02     28   ........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_291537

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           339     2e-95
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GTC	TACAACTGG	CGGGAGGGGGCGTTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTCTACAACTGGCGGGAGGGGGCGTTCACTAC	GLQLAGGGVHY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9302   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGCAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.7% (230/243)  IGHV3-33*01  47   ...........................................T.GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  S  N  K  H  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_9302   91   AGTGGGTGGCAATTATATGGTATGATGGAAGTAACAAACACTATGCAGACTCCGTCCAGGGCCGATTCACCATATCCAGAGACAATTCCA  180
V  94.7% (230/243)  IGHV3-33*01  137  ...........G......................T...T................GA................C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  G  L  Q  L  A  G  G  G  V  
                    Query_9302   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCTGTATATTACTGTGGTCTACAACTGGCGGGAGGGGGCGTTC  270
V  94.7% (230/243)  IGHV3-33*01  227  ........C...........................C...G...........G..........---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (9/9)     IGHD1-1*01   3    ------------------------------------------------------------------.........---------------  11

                                      ---->                                  
                                      H  Y  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_9302   271  ACTACAGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.4% (38/39)    IGHJ4*02     10   .....T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_291536

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD1-26*01                                                                                           12.2    33   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTGGACCC	GGGAGC	ACAGTAGGTCGTCAGCATTAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGGACCCGGGAGCACAGTAGGTCGTCAGCATTATTACTACAATATGGACGTC	ATGPGSTVGRQHYYYNMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	230	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9303   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  93.5% (230/246)  IGHV3-23*01  47   ..........................................................C..........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  S  G  D  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  F  R  D  N  S  
                    Query_9303   91   AGTGGGTCTCAGTTATTAGTGGCAGTGGTGACAACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTTCAGAGACAACTCCA  180
V  93.5% (230/246)  IGHV3-23*01  137  ............C.........T.......GT.G.........................................C.........T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  I  L  Y  L  Q  V  N  S  L  R  V  A  D  T  A  V  Y  Y  C  A  T  G  P  G  S  T  V  G  
                    Query_9303   181  AGAACATACTGTATCTGCAAGTAAACAGCCTCAGAGTCGCGGACACGGCCGTATATTACTGTGCGACTGGACCCGGGAGCACAGTAGGTC  270
V  93.5% (230/246)  IGHV3-23*01  227  ......CG............A.G........G....C..A..........................------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD1-26*01  9    --------------------------------------------------------------------------......----------  14

                                      -IMGT----------------------->                                 
                                      R  Q  H  Y  Y  Y  N  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9303   271  GTCAGCATTATTACTACAATATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  96.1% (49/51)    IGHJ6*02     12   -----------......GG...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_291535

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD4-4*01                                                                                            18.0    0.56 
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AATAAGAGATTC	GACTACAGT	TAT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAAAAATAAGAGATTCGACTACAGTTATTAC	TKNKRFDYSYY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  L  R  S  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9304   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCCTTAGGAGCTTTGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (226/248)  IGHV3-23*01  47   .....................C................T....C....A.........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  N  T  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  S  
                    Query_9304   91   AATGGGTCTCAGCTATTACTGGTAATACTGGTACCACATACTACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACACCTCCA  180
V  91.1% (226/248)  IGHV3-23*01  137  .G................G.....G.GG.....G..................C...............................AT....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  T  K  N  K  R  F  D  Y  S  
                    Query_9304   181  AGTCCACGCTGTACCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTTTACTACTGCACGAAAAATAAGAGATTCGACTACAGTT  270
V  91.1% (226/248)  IGHV3-23*01  227  ..AA.........T..........................G...........A..T.....TG.....----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD4-4*01   2    --------------------------------------------------------------------------------.........-  10

                                      ---->                                  
                                      Y  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_9304   271  ATTACTGGGGCCAGGGAACCCTGGTCTCGGTCTCCTCAG  309
J  94.6% (35/37)    IGHJ4*02     12   --........................A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_291534

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            439     2e-125
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	286	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  K  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_9305   1    GCAGCTGGTGCAGTCTGGGGCTAAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  98.3% (286/291)  IGHV1-2*04   6    ......................G.........AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_9305   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.3% (286/291)  IGHV1-2*04   96   ..........................................................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  L  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_9305   181  GAAGCTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  98.3% (286/291)  IGHV1-2*04   186  ....T.....................................................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W  G  Q
                    Query_9305   271  CGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGGGGCCA  360
V  98.3% (286/291)  IGHV1-2*04   276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  96.5% (55/57)    IGHJ6*02     6    ----------------------------------------------------------....A...........................  37

                                                               
                                        G  T  S  V  T  V  S  S 
                    Query_9305   361  AGGGACCTCGGTCACCGTCTCCTCA  385
J  96.5% (55/57)    IGHJ6*02     38   .......A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_291533

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ3*01                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATA	CTACAGGTCG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACAGGTCGTGATCCTTTTGATTTC	ARVSREYYDTTGRDPFDF	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9306   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9306   91   AGTGGGTGGCAGTTATTTGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  96.8% (241/249)  IGHV3-33*01  137  ................A.....................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_9306   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  96.8% (241/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  F  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_9306   271  CTACAGGTCGTGATCCTTTTGATTTCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
J  92.0% (46/50)    IGHJ3*01     1    ----------....G........G...................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_291532

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           336     1e-94
IGHD3-3*02                                                                                            35.3    4e-06
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGATGAAG	GTATTAACTTTTTTGGAGTGCTTATTA	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGATGAAGGTATTAACTTTTTTGGAGTGCTTATTAACTACTTTGACTTC	ARGDEGINFFGVLINYFDF	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  D  Y  A  M  T  W  V  R  Q  T  P  G  K  G  L  
                    Query_9307   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTCACTGACTATGCCATGACCTGGGTCCGCCAGACTCCAGGGAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-21*01  47   ................................T.........G.AG....AG.....A.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9307   91   AGTGGGTCTCCTCCATTAGTAGTAGTAGTACTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.2% (232/249)  IGHV3-21*01  137  ..........A...................G...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      R  N  L  V  F  L  Q  M  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  D  E  G  I  N  F  
                    Query_9307   181  GGAACTTAGTGTTTCTGCAGATGCACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGGGGATGAAGGTATTAACTTTT  270
V  93.2% (232/249)  IGHV3-21*01  227  A.....C.C...A......A...A............................G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (24/27)    IGHD3-3*02   1    ------------------------------------------------------------------------------......G.A...  12

                                      -IMGT----------------------->                                  
                                      F  G  V  L  I  N  Y  F  D  F  W  G  P  G  A  L  V  T  V  S  S  
                    Query_9307   271  TTGGAGTGCTTATTAACTACTTTGACTTCTGGGGCCCGGGAGCCCTGGTCACCGTCTCCTCAG  333
D  88.9% (24/27)    IGHD3-3*02   13   ........G......------------------------------------------------  27
J  93.8% (45/48)    IGHJ4*02     1    ---------------............A........A....A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_291531

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            363     1e-102
IGHD3-22*01                                                                                           52.6    2e-11 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGACGGGGT	TATTACTATGATAATAGTGGTTATTACTAC	GGTCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACGGGGTTATTACTATGATAATAGTGGTTATTACTACGGTCTC	ARRRGYYYDNSGYYYGL	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  S  H  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9308   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGTAGTCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  97.2% (239/246)  IGHV4-4*02   49   ...............................G................A.........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  N  S  K 
                    Query_9308   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAACACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAACTCCAAG  180
V  97.2% (239/246)  IGHV4-4*02   139  ...............................G...................................................G......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  R  R  G  Y  Y  Y  D  N 
                    Query_9308   181  AACCAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCCATATATTACTGTGCGAGACGACGGGGTTATTACTATGATAAT  270
V  97.2% (239/246)  IGHV4-4*02   229  .......................C........................G.G...............------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  96.7% (29/30)    IGHD3-22*01  2    ---------------------------------------------------------------------------.............G.  16

                                      -------------------->                                  
                                       S  G  Y  Y  Y  G  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9308   271  AGTGGTTATTACTACGGTCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  96.7% (29/30)    IGHD3-22*01  17   ...............----------------------------------------  31
J  100.0% (35/35)   IGHJ4*02     14   --------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_268801

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTGA	TATGGTTCGCGGAGTT	CTTGAGAGGGAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTGATATGGTTCGCGGAGTTCTTGAGAGGGAGGACTAC	ARLDMVRGVLEREDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_9309   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGCAAGGGTTCTGGGTACAGCTTTTCCACCTA  90
V  97.6% (282/289)  IGHV5-51*03  6    ............................................................T...........A.........A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  S  P
                    Query_9309   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACAGCCC  180
V  97.6% (282/289)  IGHV5-51*03  96   ........G........................................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9309   181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  ........A.................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  L  D  M  V  R  G  V  L  E  R  E  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9309   271  CATGTATTACTGTGCGAGACTTGATATGGTTCGCGGAGTTCTTGAGAGGGAGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  97.6% (282/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  93.8% (15/16)    IGHD3-10*01  8    ------------------------.........G......--------------------------------------------------  23
J  100.0% (40/40)   IGHJ4*02     9    ----------------------------------------------------......................................  46

                                        
                                        
                    Query_9309   361  AG  362
J  100.0% (40/40)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_33570

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           311     5e-87
IGHD6-13*01                                                                                           18.0    0.62 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTGGT	CAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTGGTCAGCAGCTGACTGACTAC	ARDSGQQLTDY	276	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	275	147	111	3	33	75.5
CDR3-IMGT (germline)	276	283	8	8	0	0	100
Total	N/A	N/A	283	243	7	33	85.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  R  A  P  G  R  G  L  
                    Query_9310   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCGGGCTCCAGGGAGGGGGCTGG  90
V  85.9% (243/283)  IGHV3-21*01  47   ..............................................C......................A...........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  H  I  Y  Y  G  D  S  V  K  G  R  F  T  Y  Y  A  D  S  V  
                    Query_9310   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAGTCACATATATTATGGAGACTCAGTGAAGGGCCGATTCACCTATTACGCAGACTCAGTGA  180
V  85.9% (243/283)  IGHV3-21*01  137  ................................T.....---------------------------------..C................  193
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I                                   Y  Y  A  D  S  V  

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                      K  G  R  F  T  I  S  R  D  D  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  
                    Query_9310   181  AGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATT  270
V  85.9% (243/283)  IGHV3-21*01  194  ..........................A..........................................................G....  283
                                      K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-----------CDR3-IMGT----------->                                  
                                      Y  C  A  R  D  S  G  Q  Q  L  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9310   271  ACTGTGCGAGAGATTCTGGTCAGCAGCTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
V  85.9% (243/283)  IGHV3-21*01  284  .............-----------------------------------------------------------  296
                                      Y  C  A  R                                                              
D  100.0% (9/9)     IGHD6-13*01  9    --------------------.........-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_317048

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           324     8e-91
IGHD3-3*01                                                                                            21.8    0.042
IGHJ5*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGATGGGGAAGGG	ACGATTTTTGG	GATGGGGTGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGATGGGGAAGGGACGATTTTTGGGATGGGGTGAGGTTCGACTCT	ARGRWGRDDFWDGVRFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  S  L  T  G  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9311   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCAGCCTCACAGGCTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-48*03  47   ........................C...........C.T...GTA.T...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  S  G  S  T  R  H  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  A  
                    Query_9311   91   AATGGATCTCATACATCAGTAGTAGTGGCAGTACCAGACATTACGCAGACTCTGTGAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  91.6% (228/249)  IGHV3-48*03  137  .G...G.T........T...........T.......T.T.C........................T........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  R  W  G  R  D  D  
                    Query_9311   181  AGAACTCACTATATTTGGAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGAGGCCGATGGGGAAGGGACGATT  270
V  91.6% (228/249)  IGHV3-48*03  227  ..........G...C..C..................C................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-3*01   6    ------------------------------------------------------------------------------------......  11

                                      IMGT--------------------->                                  
                                      F  W  D  G  V  R  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_9311   271  TTTGGGATGGGGTGAGGTTCGACTCTTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  330
D  100.0% (11/11)   IGHD3-3*01   12   .....-------------------------------------------------------  16
J  93.3% (42/45)    IGHJ5*01     7    ---------------..........C........A....C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_317049

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            325     3e-91
IGHD3-9*01                                                                                            19.9    0.16 
IGHJ3*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-9*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTTTCGCACCCCAG	ATTACGGTATTTT	CATTTGGAGTC	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCGTTTCGCACCCCAGATTACGGTATTTTCATTTGGAGTCGATGGTTTTGATATC	VRDRFAPQITVFSFGVDGFDI	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  V  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9312  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGTCTTTAGTACCTACTGGATGTCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-7*03  47   ...................................AC........G...T......AG................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  N  Q  H  G  N  E  K  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9312  91   AGTGGGTGGCCAACATAAATCAACATGGAAATGAGAAACATTACGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.6% (229/250)  IGHV3-7*03  137  ...................G...G......G.......T.C..T..............................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------------------C
                                     K  N  S  L  S  V  Q  M  N  N  L  R  V  E  D  T  A  V  Y  Y  C  V  R  D  R  F  A  P  Q  I  
                    Query_9312  181  AGAACTCATTGTCTGTACAAATGAACAACCTGAGAGTCGAGGACACGGCCGTGTACTATTGTGTGAGAGATCGTTTCGCACCCCAGATTA  270
V  91.6% (229/250)  IGHV3-7*03  227  ........C...A.C.G..........G........C..................T..C....C......--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD3-9*01  3    --------------------------------------------------------------------------------------....  6

                                     DR3-IMGT-------------------------->                                  
                                     T  V  F  S  F  G  V  D  G  F  D  I  W  G  Q  G  T  V  V  I  V  S  S  
                    Query_9312  271  CGGTATTTTCATTTGGAGTCGATGGTTTTGATATCTGGGGCCAAGGGACAGTGGTCATCGTCTCCTCAG  339
D  92.3% (12/13)    IGHD3-9*01  7    ..A......------------------------------------------------------------  15
J  91.8% (45/49)    IGHJ3*02    2    --------------------....C.........................A......C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_317046

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           294     6e-82
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGTACAGACAGATT	TGGTTCG	CGGGGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGTACAGACAGATTTGGTTCGCGGGGGGACTAC	AKSTDRFGSRGDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  G  I  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9313   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGAGTCGGCATTAGCACCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.9% (218/248)  IGHV3-23*01  47   ............................T...T..AC.T......G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  L  S  G  S  S  D  K  T  Y  Y  L  G  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_9313   91   AGTGGGTGTCAGGTCTAAGTGGGAGCAGTGATAAGACATATTATTTAGGCTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAGTTCCA  180
V  87.9% (218/248)  IGHV3-23*01  137  .......C....C.A.T.....T..TG...G..GC.....C..CGC..A...................................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  R  M  R  I  E  D  T  A  V  Y  Y  C  A  K  S  T  D  R  F  G  S  
                    Query_9313   181  AGAACACGCTGTATCTGCAAATGAATAGAATGAGAATCGAGGACACGGCCGTATATTATTGCGCGAAAAGTACAGACAGATTTGGTTCGC  270
V  87.9% (218/248)  IGHV3-23*01  227  .........................C..CC.....GC.....................C..T......----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-10*01  10   ----------------------------------------------------------------------------------.......-  16

                                      ---------->                                  
                                      R  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9313   271  GGGGGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (40/40)   IGHJ4*02     9    -----........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_317047

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           452     3e-129
IGHD6-13*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAC	ATAGCAGCAGCTGGT	CGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTGC	ARSHSSSWSGFDC	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	73	1	0	98.6
CDR1-IMGT	77	100	24	24	0	0	100
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	113	1	0	99.1
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	291	2	0	99.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_9314   3    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  92
V  99.3% (291/293)  IGHV5-51*03  2    ..G.......................................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_9314   93   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  182
V  99.3% (291/293)  IGHV5-51*03  92   ..........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_9314   183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACC  272
V  99.3% (291/293)  IGHV5-51*03  182  .........................................................................................A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      P  A  M  Y  Y  C  A  R  S  H  S  S  S  W  S  G  F  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9314   273  CCGCCATGTATTACTGTGCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  362
V  99.3% (291/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)   IGHD6-13*01  5    ---------------------------...............------------------------------------------------  19
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_317044

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           343     2e-96
IGHD1-26*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GG	GTGGGACCTAC	GGGTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGGGGTGGGACCTACGGGTCTTGACTAC	TTGVGPTGLDY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	104	10	0	91.2
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	237	18	0	92.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9315   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.9% (237/255)  IGHV3-15*01  47   .......T....................................A.............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  F  G  Q  I  K  S  K  T  Y  G  E  T  T  D  Y  T  A  P  V  K  G  R  F  I  V  S  R  D  
                    Query_9315   91   AGTGGTTTGGCCAAATCAAAAGCAAAACTTATGGTGAGACAACAGACTACACTGCACCCGTGAAAGGCAGATTCATCGTCTCAAGAGATG  180
V  92.9% (237/255)  IGHV3-15*01  137  .....G......GT..T............G......G.............G........................C.A............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  Q  N  M  V  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  G  V  G  P  T  
                    Query_9315   181  ATTCACAAAACATGGTGTATCTGCAGATGAACAGCCTGAAAACCGAGGACACGGCCGTCTATTATTGTACCACAGGGGTGGGACCTACGG  270
V  92.9% (237/255)  IGHV3-15*01  227  .....A......C.C..........A..........................A.....G.....C..........---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  90.9% (10/11)    IGHD1-26*01  7    -----------------------------------------------------------------------------......G....--  17

                                      ---------->                                  
                                      G  L  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9315   271  GTCTTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ4*02     7    ---...............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_317045

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*02                                                                                           325     2e-91
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCCGGTGT	GGGGAG	ATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCCGGTGTGGGGAGATCTTGACTAC	AREPVWGDLDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  R  M  H  W  V  R  Q  A  P  E  K  G  L  
                    Query_9316   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTCCTATAGGATGCACTGGGTCCGCCAGGCTCCAGAGAAGGGACTGG  90
V  91.6% (229/250)  IGHV3-64*02  47   ............................................AG....GCT.........................G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  A  A  I  T  E  N  G  G  T  T  F  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9316   91   AATATGTTGCAGCTATTACTGAAAATGGGGGAACCACATTTTATACAGACTCTGTGAAGGGCAGATTCACTATCTCCAGAGACAATTCCA  180
V  91.6% (229/250)  IGHV3-64*02  137  ........T.........G.AGT........T.G.....A....G.........................C...................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  E  M  G  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  E  P  V  W  G  D  L  
                    Query_9316   181  AGAACACGCTGTTCCTTGAAATGGGCAGCCTGAGAGTTGAGGACACGGCTGTGTATTACTGTGCGAGAGAGCCGGTGTGGGGAGATCTTG  270
V  91.6% (229/250)  IGHV3-64*02  227  ............AT...C..................C........T........................--------------------  296
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01  16   ------------------------------------------------------------------------------......------  21
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9316   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCATCAG  309
J  97.6% (41/42)    IGHJ4*02     10   ..................................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_317043

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           353     9e-100
IGHD3-10*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAATGGGGAGTT	TTACTTTGGTTCGGG	AAAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAATGGGGAGTTTTACTTTGGTTCGGGAAATTTTGACTAC	ARANGEFYFGSGNFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  E  S  Y  Y  W  S  W  L  R  Q  P  P  G  K  G 
                    Query_9317   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGAAAGTTACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGA  90
V  95.2% (238/250)  IGHV4-61*01  49   .........................................C....GT..................A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  Y  S  G  R  S  N  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S 
                    Query_9317   91   CTGGAGTGGATTGGGTATATCTTTTACAGTGGGAGATCCAACTACAACCCCTCCCTCAACAGTCGTGTCACCATATCGGTAGACACGTCC  180
V  95.2% (238/250)  IGHV4-61*01  139  ......................A............CA......................G.....A...........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  N  G  E  F  Y  F 
                    Query_9317   181  AAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCTGACACGGCCGTGTATTACTGTGCGAGAGCTAATGGGGAGTTTTACTTT  270
V  95.2% (238/250)  IGHV4-61*01  229  .....................C...................G............................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  93.3% (14/15)    IGHD3-10*01  4    -----------------------------------------------------------------------------------.....A.  10

                                      GT------------------>                                  
                                       G  S  G  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9317   271  GGTTCGGGAAATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  93.3% (14/15)    IGHD3-10*01  11   ........-----------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     6    ------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_317040

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           369     2e-104
IGHD1-1*01                                                                                            12.2    33    
IGHJ5*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	CCCGACATATGTCCTCGAG	GGAACG	GAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGACCCGACATATGTCCTCGAGGGAACGGATTGGTTCGACCCC	TTDPTYVLEGTDWFDP	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	246	10	0	96.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  G  P  G  K  G  L  
                    Query_9318   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGGTCCAGGGAAGGGGCTGG  90
V  96.1% (246/256)  IGHV3-15*01  47   .......T................................................................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  T  D  G  E  T  K  E  Y  A  A  P  V  K  G  R  F  A  I  S  R  D  
                    Query_9318   91   AGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGAGACAAAAGAGTACGCTGCACCCGTGAAAGGCAGATTCGCCATCTCAAGAGATG  180
V  96.1% (246/256)  IGHV3-15*01  137  ....................................G.....C...C...........................A...............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  K  S  T  L  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  F  C  T  T  D  P  T  Y  V  
                    Query_9318   181  ATTCAAAAAGCACGCTGTATCTGCAAATGAACAGCCTCAAATCCGAGGACACAGCCGTGTATTTCTGTACCACAGACCCGACATATGTCC  270
V  96.1% (246/256)  IGHV3-15*01  227  .........A...........................G...A.....................A............--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 

                                      R3-IMGT------------------>                                  
                                      L  E  G  T  D  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9318   271  TCGAGGGAACGGATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (6/6)     IGHD1-1*01   10   -----......-------------------------------------------------  15
J  100.0% (46/46)   IGHJ5*02     6    --------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_51319

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            346     2e-97
IGHD1-26*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	G	AGTGGGA	TGGCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGAGTGGGATGGCTCCCTGACTAC	VGGVGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  I  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9319   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCATTAGTGACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-7*01   47   ....................................C.T.....AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  E  K  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9319   91   AGTGGGTGGCCAACATAGAGAAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-7*01   137  .................A..C.................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  L  Y  Y  C  V  G  G  V  G  W  L  P  D  
                    Query_9319   181  AGAACTCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTCTGTATTACTGTGTGGGAGGAGTGGGATGGCTCCCTGACT  270
V  94.4% (235/249)  IGHV3-7*01   227  ...................A...A............C.............G............C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  6    ----------------------------------------------------------------------.......-------------  12
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  E  T  L  V  T  V  S  S  
                    Query_9319   271  ACTGGGGCCAGGAAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   ............G.......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_136764

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHD3-16*01                                                                                           10.3    116  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGACGAGGGGCA	GGGGG	CGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGACGAGGGGCAGGGGGCGGTTGACTCT	ARVDEGQGAVDS	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  K  V  S  G  G  S  I  T  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9320   1    ACCCTGTCCCTCACCTGCAAGGTCTCTGGGGGCTCCATCACGACTTACTACTGGAGTTGGATCCGACAGCCCCCAGGGAAGGGACTGGAG  90
V  92.2% (225/244)  IGHV4-59*01  49   ...................CT........T..........GT.G............C........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  V  N  R  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_9320   91   TGGATTGGGTATATCTATTACACTGGCAGTGTCAACCGCAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*01  139  ......................G...G..CAC....TA..............................A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  D  E  G  Q  G  A  V  D 
                    Query_9320   181  CAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTTGACGAGGGGCAGGGGGCGGTTGAC  270
V  92.2% (225/244)  IGHV4-59*01  229  ...............C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -----------------------------------------------------------------------------.....--------  22
J  92.9% (39/42)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9320   271  TCTTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  307
J  92.9% (39/42)    IGHJ4*02     12   .AC.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_269369

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           325     2e-91
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGAG	GGGTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGGGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	4	1	0	80
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_9321   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  93.0% (225/242)  IGHV4-59*01  49   .......................................AG....T..............A.............A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_9321   91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCGTATCAGTGGACACGTCCAAGAAT  180
V  93.0% (225/242)  IGHV4-59*01  139  ..........AT...T...................................A..............A.......A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_9321   181  CAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGGGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.0% (225/242)  IGHV4-59*01  229  ...................G...........................G..T..C...G....----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  95.1% (39/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       S  Q  G  T  L  V  T  V  S  S  
                    Query_9321   271  AGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  95.1% (39/41)    IGHJ4*02     18   G..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_269368

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           310     1e-86
IGHD3-3*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCACGACTCC	TTACGAT	GACCCACGGAAGGCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCACGACTCCTTACGATGACCCACGGAAGGCATACTTTGACTAC	ARVTTPYDDPRKAYFDY	237	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	21	3	0	87.5
FR3-IMGT	123	236	114	104	10	0	91.2
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	232	215	17	0	92.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  A  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  F  I 
                    Query_9322   12   TGTGCAGCCTCTGGATTCACCTTCAGTGCCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCCTTTATC  101
V  92.7% (215/232)  IGHV3-30*03  64   ...........................AG......................................................AG....A  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       P  Y  D  G  S  N  E  Y  Y  A  D  S  V  R  G  R  V  S  I  S  R  D  N  S  G  K  T  L  Y  L 
                    Query_9322   102  CCATATGATGGAAGTAATGAATACTATGCAGACTCCGTGAGGGGCCGAGTCTCCATCTCCAGAGACAATTCCGGGAAAACACTGTATCTG  191
V  92.7% (215/232)  IGHV3-30*03  154  T.................A.....................A.......T..A....................AA...C..G.........  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------------CDR3-IMGT---------------
                                       H  M  H  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  T  T  P  Y  D  D  P  R  K  A  Y  F 
                    Query_9322   192  CATATGCACAGCCTGAGAGCTGAGGACACGGCTTTGTATTACTGTGCGAGAGTCACGACTCCTTACGATGACCCACGGAAGGCATACTTT  281
V  92.7% (215/232)  IGHV3-30*03  244  ..A...A..........................G..................--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (7/7)     IGHD3-3*01   4    --------------------------------------------------------------.......---------------------  10
J  97.8% (45/46)    IGHJ4*02     3    ------------------------------------------------------------------------------------......  8

                                      ----->                                  
                                       D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_9322   282  GACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.8% (45/46)    IGHJ4*02     9    .............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_314539

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           319     2e-89
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_9323   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  91.8% (224/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_9323   91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (224/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_9323   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTACTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  91.8% (224/244)  IGHV4-59*08  229  ...............C...............................G..T.............--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_9323   271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_314538

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           335     4e-94
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGCTGTGGTATTC	TGATAGTGGTGGTTATT	CGGGAGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATGGGCTGTGGTATTCTGATAGTGGTGGTTATTCGGGAGGCTACTTTGACTAC	VRDGLWYSDSGGYSGGYFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  L  F  S  T  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9324   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTTGTTCAGTACTTATGAGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-48*03  47   ...................................ACC.......G......A.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  A  S  F  I  S  R  T  D  N  T  I  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9324   91   AGTGGGCTTCATTCATTAGTAGGACTGATAATACCATATACTACACAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.8% (232/250)  IGHV3-48*03  137  ......T.....A.........T.G..G..G.............G.............................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  R  S  L  Y  L  Q  M  D  N  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  G  L  W  Y  S  D  
                    Query_9324   181  AGAGATCACTGTATCTGCAAATGGACAACTTGAGAGCCGAGGACACGGCTGTTTATTACTGTGTGAGAGATGGGCTGTGGTATTCTGATA  270
V  92.8% (232/250)  IGHV3-48*03  227  ...AC..................A...G.C.................................C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  94.1% (16/17)    IGHD3-22*01  10   -------------------------------------------------------------------------------------.....  14

                                      R3-IMGT------------------------>                                  
                                      S  G  G  Y  S  G  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9324   271  GTGGTGGTTATTCGGGAGGCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  94.1% (16/17)    IGHD3-22*01  15   ..A.........------------------------------------------------------  26
J  100.0% (47/47)   IGHJ4*02     2    -------------------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_269365

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGATGGCCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTC	VRQSSDGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  S  Y
                    Query_9325   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCAGTTA  90
V  95.5% (278/291)  IGHV5-51*01  6    ....................................C.......................................AG.........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  T  G  L  E  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  S  P
                    Query_9325   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGTGGATGGGGATCATCTTTCCGGATGACTCTGATACCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ................................A..........................A...T.G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9325   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  ............................................G.....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                           
                                        K  Y  Y  C  V  R  Q  S  S  D  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_9325   271  CAAGTATTATTGTGTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  355
V  95.5% (278/291)  IGHV5-51*01  276  ..T......C....C......----------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                   
J  100.0% (42/42)   IGHJ6*02     15   -------------------------------------------..........................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_269364

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           322     2e-90
IGHD2-15*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCCTCCC	GGTGGTA	ACCGACC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAGATCCTCCCGGTGGTAACCGACCCTTTCACTAC	AADPPGGNRPFHY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  I  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9326   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACTATCTATACCATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-21*01  47   ..........................................G..G.....G....A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  G  A  S  G  A  Y  A  F  Y  A  D  S  L  K  G  Q  F  T  V  S  R  D  N  A  
                    Query_9326   91   AGTGGGTCTCAGCCATTGGTGCTAGTGGTGCTTACGCGTTCTACGCAGACTCACTGAAGGGCCAATTCACCGTCTCCAGAGACAACGCCA  180
V  91.2% (228/250)  IGHV3-21*01  137  ...........T.....A..AG....A..AG....ATA.A.............G.........G.......A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  A  D  P  P  G  G  N  R  
                    Query_9326   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCTGTCTATTACTGTGCGGCAGATCCTCCCGGTGGTAACCGAC  270
V  91.2% (228/250)  IGHV3-21*01  227  ....................................C...............G............AG...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-15*01  14   -----------------------------------------------------------------------------.......------  20

                                      ---------->                                  
                                      P  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9326   271  CCTTTCACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  315
J  95.5% (42/44)    IGHJ4*02     5    -....G................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_269367

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           367     5e-104
IGHD3-10*01                                                                                           10.3    116   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACGAGCGGTC	TCGGG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACGAGCGGTCTCGGGATTGACTAC	ARDTSGLGIDY	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	243	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_9327   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTTCTTACTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (243/251)  IGHV4-31*03  49   ................................................GG...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  R  S  G  S  T  Y  Y  N  P  S  L  K  S  R  I  T  I  S  I  D  T  S 
                    Query_9327   91   CTGGAGTGGATTGGGTACATCTATCGCAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAATTACCATATCAATAGACACGTCT  180
V  96.8% (243/251)  IGHV4-31*03  139  ........................TA........................................G...........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  S  G  L  G  I 
                    Query_9327   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGATACGAGCGGTCTCGGGATT  270
V  96.8% (243/251)  IGHV4-31*03  229  .....................................................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  14   ----------------------------------------------------------------------------------.....---  18
J  100.0% (42/42)   IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9327   271  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (42/42)   IGHJ4*02     9    ........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_269366

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            352     3e-99
IGHD5-18*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD5-18*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	N/A	TGGATACAACTATGG	GAGTGTCCCGGCGGGCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTGGATACAACTATGGGAGTGTCCCGGCGGGCATTGACTAC	AGYNYGSVPAGIDY	264	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	77	27	25	2	0	92.6
FR2-IMGT	78	128	51	50	1	0	98
CDR2-IMGT	129	149	21	17	4	0	81
FR3-IMGT	150	263	114	103	11	0	90.4
CDR3-IMGT (germline)	264	265	2	2	0	0	100
Total	N/A	N/A	265	245	20	0	92.5


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  V  S  I  S  S  S  N  W  W  S  *  V  
                    Query_9328   1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCACCTGCGCTGTTTCTGGTGTCTCCATCAGTAGTAGTAACTGGTGGAGTTGAGTCC  90
V  92.5% (245/265)  IGHV4-4*02   26   ................T.............................C.......G.........C....................G....  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  M  Y  H  G  G  T  T  N  Y  K  P  S  L  K  S  R  V  
                    Query_9328   91   GCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATGTACCATGGTGGGACCACCAACTACAAGCCGTCCCTCAAGAGTCGGGTCT  180
V  92.5% (245/265)  IGHV4-4*02   116  ........................................C..T...A......G............C.................A...A  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      S  I  S  V  D  T  S  K  N  Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  G  
                    Query_9328   181  CCATATCCGTGGACACGTCCAAGAACCAGTTCTCCCTGACGCTGACCTCTGTGACCGCCGCGGACACGGCCATTTATTATTGTGCTGGAT  270
V  92.5% (245/265)  IGHV4-4*02   206  .......A..A....A.......................A.....G.........................G.G.....C.....-----  290
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A     
D  93.3% (14/15)    IGHD5-18*01  2    -------------------------------------------------------------------------------------.....  6

                                      ----------CDR3-IMGT--------------->                                  
                                      Y  N  Y  G  S  V  P  A  G  I  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9328   271  ACAACTATGGGAGTGTCCCGGCGGGCATTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  339
D  93.3% (14/15)    IGHD5-18*01  7    ...G......-----------------------------------------------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_269361

Length=302
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           193     2e-51
IGHD6-19*01                                                                                           12.2    28   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	204	245	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR2-IMGT	51	68	18	18	0	0	100
CDR2-IMGT	69	89	21	17	4	0	81
FR3-IMGT	90	203	114	100	14	0	87.7
CDR3-IMGT (germline)	204	211	8	7	1	0	87.5
Total	N/A	N/A	161	142	19	0	88.2


Alignments

                                      <----FR2-IMGT----><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  M  S  V  D  T  S 
                    Query_9329   51   CTGGAGTGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCC  140
V  88.2% (142/161)  IGHV4-34*01  133  ......................A............CA.C.AC......C..T......A...............A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  K  Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R 
                    Query_9329   141  AAGAAACAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCTGGCGAAGACAGCGC  230
V  88.2% (142/161)  IGHV4-34*01  223  .....C..GT...........C..A......T.....................G.....C......A....-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------------......------------  18
J  98.0% (49/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9329   231  AACTGGTTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  279
J  98.0% (49/50)    IGHJ5*02     3    .............................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 29037525


Query= Query_269360

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           396     2e-112
IGHD3-3*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GG	TTACGATTTTTGGAGTGGTT	TCAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTTACGATTTTTGGAGTGGTTTCAGACTTTGACTAC	ARVTIFGVVSDFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	270	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T  Y  H 
                    Query_9330   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTACCTACCAC  91
V  94.1% (270/287)  IGHV1-18*04  7    ............................................................................C.......AG.T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  T  D  G  N  T  R  Y  A  H 
                    Query_9330   92   GGTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTACCGATGGGAACACACGCTATGCACAC  181
V  94.1% (270/287)  IGHV1-18*04  97   .......G.......................................................TA.A....T......AA.........G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  V  Q  G  R  V  T  L  T  T  D  S  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_9330   182  AACGTCCAGGGCAGAGTCACCTTGACCACAGACTCATCCACGAGCACCGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.1% (270/287)  IGHV1-18*04  187  ..GC.................A...........A.............A..........................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  V  T  I  F  G  V  V  S  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9330   272  GTGTATTACTGTGCGAGGGTTACGATTTTTGGAGTGGTTTCAGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  94.1% (270/287)  IGHV1-18*04  277  .................-----------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                          
D  100.0% (20/20)   IGHD3-3*01   4    -------------------....................-------------------------------------------------  23
J  100.0% (45/45)   IGHJ4*02     4    -------------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_269363

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           327     9e-92
IGHD2-15*01                                                                                           41.1    7e-08
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGG	TATTGTAGTGGTGATAGCTGCTCCTCC	GGGG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGTATTGTAGTGGTGATAGCTGCTCCTCCGGGGACAACTGGTTCGACCCC	ARWYCSGDSCSSGDNWFDP	237	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	107	7	0	93.9
CDR3-IMGT (germline)	237	242	6	6	0	0	100
Total	N/A	N/A	231	220	11	0	95.2


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  S  F  S  I  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 
                    Query_9331   12   TGTGCAGCCTCTGGATTCAGCTTCAGTATCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATT  101
V  95.2% (220/231)  IGHV3-21*01  64   ...................C........G.............................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  S  S  S  H  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  Q  N  S  L  Y  L 
                    Query_9331   102  AGTAGTAGTAGTAGTCACAAATATTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCCAGAACTCTCTGTATCTG  191
V  95.2% (220/231)  IGHV3-21*01  154  ...............T...T...C................................................A.......A.........  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-----------------------CDR3-IMGT------------
                                       Q  M  N  S  L  R  V  E  D  T  A  I  Y  Y  C  A  R  W  Y  C  S  G  D  S  C  S  S  G  D  N 
                    Query_9331   192  CAAATGAATAGCCTGAGAGTCGAGGACACGGCTATTTATTACTGTGCGAGATGGTATTGTAGTGGTGATAGCTGCTCCTCCGGGGACAAC  281
V  95.2% (220/231)  IGHV3-21*01  244  ........C..........C.............G.G...............---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  92.6% (25/27)    IGHD2-15*01  5    ------------------------------------------------------.............G........A....---------  31
J  96.1% (49/51)    IGHJ5*02     1    -------------------------------------------------------------------------------------.....  5

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_9331   282  TGGTTCGACCCCTGGGGCCAGGGAACCCTTGTCATCGTCTCCTCAG  327
J  96.1% (49/51)    IGHJ5*02     6    .............................G....C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_350568

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD3-16*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_9332   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (227/249)  IGHV4-61*01  49   .......................C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S 
                    Query_9332   91   CTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  91.2% (227/249)  IGHV4-61*01  139  ....A.........GT............G......CAC..A.........................G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y 
                    Query_9332   181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTAT  270
V  91.2% (227/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------------.....  28

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_9332   271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
D  100.0% (7/7)     IGHD3-16*02  29   ..--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_350569

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           357     1e-100
IGHD3-3*01                                                                                            21.8    0.041 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGCCTCGTGCCTG	GGAGTGGTTAT	GAAGCCATACCA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGCCTCGTGCCTGGGAGTGGTTATGAAGCCATACCAGACTAC	AKSLVPGSGYEAIPDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9333   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTTAGCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-23*01  47   ......................................T..................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  D  T  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9333   91   AATGGGTCTCAGGTATTAGTGGTAGTGGTGGTGACACATACTACGCAGACGCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (238/248)  IGHV3-23*01  137  .G..........C...................AG................T.......................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  F  C  A  K  S  L  V  P  G  S  G  
                    Query_9333   181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTATATTTCTGTGCGAAAAGCCTCGTGCCTGGGAGTGGTT  270
V  96.0% (238/248)  IGHV3-23*01  227  ...A................................C....................A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD3-3*01   15   ---------------------------------------------------------------------------------.........  23

                                      T------------------>                                
                                      Y  E  A  I  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9333   271  ATGAAGCCATACCAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  322
D  100.0% (11/11)   IGHD3-3*01   24   ..--------------------------------------------------  25
J  100.0% (38/38)   IGHJ4*02     9    --------------......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_136767

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_9334   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.9% (279/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_9334   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_9334   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  .......C.....................................C...........G......A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_9334   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.9% (279/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_9334   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_350560

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            358     4e-101
IGHD6-19*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              58.4    9e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGTCCAC	TATAGTATTAGCTGGTAC	CACC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGTCCACTATAGTATTAGCTGGTACCACCTTGACTTC	ARGVHYSISWYHLDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  F  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9335   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTGACTATTTCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-7*01   47   ............................................AG.....GG.....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  N  E  Q  Y  Y  L  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9335   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAATGAGCAATATTATTTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (239/249)  IGHV3-7*01   137  ..............................G....A....C...G.............................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  V  H  Y  S  I  S  
                    Query_9335   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGAGTCCACTATAGTATTAGCT  270
V  96.0% (239/249)  IGHV3-7*01   227  ....C................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  83.3% (15/18)    IGHD6-19*01  4    -----------------------------------------------------------------------------.....C.G.G...  16

                                      ---------------->                                  
                                      W  Y  H  L  D  F  W  G  Q  G  T  L  V  S  A  S  S  
                    Query_9335   271  GGTACCACCTTGACTTCTGGGGCCAGGGAACCCTGGTCAGTGCCTCCTCAG  321
D  83.3% (15/18)    IGHD6-19*01  17   .....----------------------------------------------  21
J  90.5% (38/42)    IGHJ4*02     7    ---------......A.......................CC.T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_350561

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           378     3e-107
IGHD1-26*01                                                                                           16.1    2.5   
IGHJ1*01                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGAC	GGGAGCTA	TCCCTGGCGACTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGATCGACGGGAGCTATCCCTGGCGACTTC	SRSTGAIPGDF	289	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	75	0	0	100
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	18	6	0	75
FR3-IMGT	175	288	114	101	13	0	88.6
CDR3-IMGT (germline)	289	294	6	5	1	0	83.3
Total	N/A	N/A	294	268	26	0	91.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_9336   1    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  90
V  91.2% (268/294)  IGHV1-18*01  1    ..........................................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  F  G  V  T  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  R  A  A  Y  N  A  D  T  K  Y 
                    Query_9336   91   GACTTTGGTGTCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGTTGGGATGGAGAGCCGCTTACAATGCTGACACAAAGTAT  180
V  91.2% (268/294)  IGHV1-18*01  91   AG..A....A...G.....................................A.........TCAG...........G.A.......C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       T  P  K  L  Q  G  R  L  T  L  T  T  D  S  S  T  S  T  A  Y  L  D  L  R  S  L  R  S  D  D 
                    Query_9336   181  ACACCGAAACTCCAGGGCAGACTCACCTTGACCACCGACTCATCCACGAGCACAGCCTACTTGGACTTGAGGAGCCTGAGATCTGACGAC  270
V  91.2% (268/294)  IGHV1-18*01  181  G...A...G............G.....A.......A...A....................A....GC.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------CDR3-IMGT----------->                                  
                                       T  A  L  Y  Y  C  S  R  S  T  G  A  I  P  G  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9336   271  ACGGCCCTTTATTACTGTTCGAGATCGACGGGAGCTATCCCTGGCGACTTCTGGGGCCAGGGCACCCTCGTCACCGTCTCCTCAG  355
V  91.2% (268/294)  IGHV1-18*01  271  ......G.G.........G.....-------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                              
D  100.0% (8/8)     IGHD1-26*01  9    -----------------------------........------------------------------------------------  16
J  97.1% (34/35)    IGHJ1*01     18   --------------------------------------------------..................G................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_350563

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           341     5e-96
IGHD4-17*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCACTACAACGTT	TACGGTGACTAC	GGCGT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCACTACAACGTTTACGGTGACTACGGCGTTGATGCTTTTGATATC	ARDHYNVYGDYGVDAFDI	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  T  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  *  L  E  
                    Query_9337   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCACCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGTGACTGGAGT  93
V  94.7% (231/244)  IGHV4-59*01  50   .....TCC...A....C...............T...............................................G.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  V  G  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  A  K  N  
                    Query_9337   94   GGGTTGGGTATATCTATTACAGAGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGGCCAAGAATC  183
V  94.7% (231/244)  IGHV4-59*01  140  ..A...................T....G....................................................T.......C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  H  Y  N  V  Y  G  D  Y  
                    Query_9337   184  AGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCACTACAACGTTTACGGTGACTACG  273
V  94.7% (231/244)  IGHV4-59*01  230  ..................G.............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (12/12)   IGHD4-17*01  5    -----------------------------------------------------------------------------............-  16

                                      ------------------->                                  
                                      G  V  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9337   274  GCGTTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACTGTCTCTTCAG  327
J  98.0% (49/50)    IGHJ3*02     1    ----.......................................C..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_350564

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGTCCCGACTGAACTACGGCATGGACGTC	ARLMSRLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  S  N  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_9338   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATCAGCAATTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G.........T.G................A............................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9338   91   TGGATTGAGTACATCTATTACAGGGGGAGTCCCAATAACGACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G...T...........T.....CA....CT..A..................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_9338   181  CAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTAATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  .............A.C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  96.0% (48/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9338   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  309
J  96.0% (48/50)    IGHJ6*02     24   ...................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_350565

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            319     2e-89
IGHD3-3*01                                                                                            12.2    31   
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGGACCTGGCAGGGGATTCTT	GATTTT	N/A	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATGGGACCTGGCAGGGGATTCTTGATTTT	ARDGTWQGILDF	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  L  V  S  G  F  S  L  S  D  Y  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9339  1    GGTCCCTGAGACTCTCCTGTCTAGTCTCTGGATTCAGTTTGAGTGATTATTATATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-7*03  47   ....................GC..C...........CC..T...AGC....GG....G................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  N  R  D  G  S  G  R  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9339  91   AGTGGGTGGCCAACATAAACCGAGATGGAAGTGGGAGATACTATGTGGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  90.8% (227/250)  IGHV3-7*03  137  ...................G.A...........A..A...........................A.........................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                     K  N  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  G  T  W  Q  G  I  
                    Query_9339  181  AGAACTCACTGTTTCTGCAAATGAACAGCCTCAGAGTCGAAGATACGGCCGTGTATTACTGTGCGCGAGATGGGACCTGGCAGGGGATTC  270
V  90.8% (227/250)  IGHV3-7*03  227  ............A..................G....C...G..C.....................A....--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                     ------->                                  
                                     L  D  F  W  G  Q  G  A  L  V  S  V  S  S  
                    Query_9339  271  TTGATTTTTGGGGCCAGGGAGCCCTGGTCAGCGTCTCCTCAG  312
D  100.0% (6/6)     IGHD3-3*01  8    --......----------------------------------  13
J  94.1% (32/34)    IGHJ4*02    15   --------............A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_350567

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         385     4e-109
IGHD6-19*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCTTAAGGTCAATCGCGTC	CAGTGGCTGG	GCGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCA	ARHPLRSIASSGWAS	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	66	5	0	93
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	101	13	0	88.6
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                        <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                           Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  T  F  T  N  
                    Query_9340     7    TGCAGCTGGTGCAGTCTGGAGGAGAGGTGAAGAAGCCCGGGGAGTCTTTGAGGATTTCCTGTAAGGCTTCTGGATACACCTTTACCAACT  96
V  92.4% (268/290)  IGHV5-10-1*01  5    .....................C.........A...............C.......C..........G...........G........G..  94
                                           Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  

                                        ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                        Y  W  I  S  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  R  Y  S  
                    Query_9340     97   ACTGGATCAGCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGACCCTAGTGACTCTTATACCCGCTACAGTC  186
V  92.4% (268/290)  IGHV5-10-1*01  95   .......................A.....................................T..................AA......C.  184
                                        Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  

                                        -------------------------------------------FR3-IMGT---------------------------------------
                                        P  S  F  D  G  N  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  M  A  S  D  A  
                    Query_9340     187  CGTCCTTCGACGGCAACGTCACCATCTCAGTTGACAAGTCCATCAGTACTGCCTATTTGCAGTGGAGCAGCCTGATGGCCTCGGACGCCG  276
V  92.4% (268/290)  IGHV5-10-1*01  185  ........C.A...C...............C...............C........CC..................A..........A...  274
                                        P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                        -------------><-----------------CDR3-IMGT----------------->                               
                                        A  M  Y  Y  C  A  R  H  P  L  R  S  I  A  S  S  G  W  A  S  W  G  Q  G  T  L  V  T  V  S  
                    Query_9340     277  CCATGTATTATTGTGCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCATGGGGCCAGGGAACCCTGGTCACCGTCTCCT  366
V  92.4% (268/290)  IGHV5-10-1*01  275  ..........C.........----------------------------------------------------------------------  294
                                        A  M  Y  Y  C  A  R                                                                       
D  100.0% (10/10)   IGHD6-19*01    9    -------------------------------------------..........-------------------------------------  18
J  100.0% (34/34)   IGHJ4*02       15   -----------------------------------------------------------...............................  45

                                           
                                        S  
                    Query_9340     367  CAG  369
J  100.0% (34/34)   IGHJ4*02       46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_249820

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           349     2e-98
IGHD7-27*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GG	AACTGGG	ACAACGTAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAACTGGGACAACGTAGACTACTTTGACTAC	ARGNWDNVDYFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  N  T  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9341   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCATCTTCAATACCTATGGCATTCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-30*03  47   ......................A.............C.....G..G.........G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  D  G  T  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9341   91   AGTGGGTGGCTCTTATATCATATGATGGAACTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (236/249)  IGHV3-30*03  137  ..........AG..................G...........................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  V  Y  L  Q  M  N  S  L  K  P  E  D  T  A  V  Y  Y  C  A  R  G  N  W  D  N  V  D  
                    Query_9341   181  AGAATACGGTGTATCTGCAAATGAACAGCCTGAAACCTGAGGACACGGCTGTATATTACTGTGCGAGAGGGAACTGGGACAACGTAGACT  270
V  94.8% (236/249)  IGHV3-30*03  227  ....C...C........................G.G................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD7-27*01  3    -----------------------------------------------------------------------.......------------  9
J  100.0% (48/48)   IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9341   271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_249823

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           311     4e-87
IGHD5-12*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TCAAGGATTGA	ATATAGTGACTAC	AACCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATCAAGGATTGAATATAGTGACTACAACCCCCTTGACTTC	AKSRIEYSDYNPLDF	237	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	20	4	0	83.3
FR3-IMGT	123	236	114	105	9	0	92.1
CDR3-IMGT (germline)	237	242	6	6	0	0	100
Total	N/A	N/A	231	215	16	0	93.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  I  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 
                    Query_9342   12   TGTGCAGCCTCTGGATTCATCTTCAGTAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATT  101
V  93.1% (215/231)  IGHV3-30*18  64   ...................C........GC...........................................................A  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  Y  D  G  G  N  R  N  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  K  N  T  L  F  L 
                    Query_9342   102  TCATATGATGGGGGTAATAGAAACTATGCAGACTCCGTGAAGGGCCGATTCTCCATCTCCAGAGACAATTCCAAGAACACACTGTTTCTG  191
V  93.1% (215/231)  IGHV3-30*18  154  ...........AA......A.T.............................A............................G....A....  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------CDR3-IMGT----------------->
                                       Q  M  S  T  V  R  A  E  D  T  A  V  Y  Y  C  A  K  S  R  I  E  Y  S  D  Y  N  P  L  D  F 
                    Query_9342   192  CAAATGAGCACCGTGAGAGCTGAGGACACGGCTGTTTATTATTGTGCGAAATCAAGGATTGAATATAGTGACTACAACCCCCTTGACTTC  281
V  93.1% (215/231)  IGHV3-30*18  244  .......A..G.C......................G.....C.........---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  92.3% (12/13)    IGHD5-12*01  5    --------------------------------------------------------------........G....---------------  17
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------......A.  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9342   282  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_249824

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           338     5e-95
IGHD6-13*01                                                                                           14.1    8.6  
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGCGTTCACACTGT	CTGGTAC	GG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCGCGTTCACACTGTCTGGTACGGCTACTACGCTATGGACGTC	AKDRVHTVWYGYYAMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  D  Y  G  M  H  W  A  R  Q  A  P  G  K  G  L  
                    Query_9343   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTGACTATGGCATGCACTGGGCCCGCCAGGCTCCGGGCAAGGGGCTGC  90
V  93.2% (233/250)  IGHV3-30*18  47   ...................................A........AG.................T............A............G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  F  I  S  Y  D  E  T  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9343   91   AGTGGGTGTCATTTATATCATATGATGAAACTACTACATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCGA  180
V  93.2% (233/250)  IGHV3-30*18  137  ........G..G...............G..G..A..A...................................................C.  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  F  L  Q  L  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  R  V  H  T  V  W  
                    Query_9343   181  AGAACACGCTGTTTCTGCAACTGAACAGCCTGAGACCTGAGGACACGGCTGTCTATTACTGTGCGAAAGACCGCGTTCACACTGTCTGGT  270
V  93.2% (233/250)  IGHV3-30*18  227  ............A.......A..............G................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------------.....  19

                                      GT-------------------->                                 
                                      Y  G  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9343   271  ACGGCTACTACGCTATGGACGTCTGGGGCCAAGGCACCACGGTCACCGTCTCCTCA  326
D  100.0% (7/7)     IGHD6-13*01  20   ..------------------------------------------------------  21
J  96.2% (50/52)    IGHJ6*02     11   ----........G.....................G.....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_249825

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           308     4e-86
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	AGESFLDSSGYPLDGMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	16	8	0	66.7
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	233	215	18	0	92.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 
                    Query_9344   13   TGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATT  102
V  92.3% (215/233)  IGHV3-21*01  64   ...........................AG.............................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  K  K  S  V  F  L 
                    Query_9344   103  AGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCAAGAAGTCAGTGTTTCTG  192
V  92.3% (215/233)  IGHV3-21*01  154  ...AG.AG..G..G.T....A........A.......................................G.......C...C...A....  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------------------CDR3-IMGT-------------
                                       Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  G  E  S  F  L  D  S  S  G  Y  P  L  D  G 
                    Query_9344   193  CAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGGGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGT  282
V  92.3% (215/233)  IGHV3-21*01  244  .......................G...........G............A....-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (15/15)   IGHD3-22*01  11   ---------------------------------------------------------------...............------------  25
J  100.0% (47/47)   IGHJ6*02     16   -------------------------------------------------------------------------------------.....  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9344   283  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  100.0% (47/47)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_249826

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	N/A	TCGACTCTGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCGACTCTGCTTGACAAA	ASTLLDK	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9345   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGCACCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (229/245)  IGHV3-23*01  47   ....................................C........G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  T  G  I  S  G  S  G  E  N  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_9345   91   AGTGGGTCACAGGTATCAGTGGTAGTGGTGAAAACACATACTACGCAGACTCCGTGAAGGGCCGTTTCACCGTCTCCAGAGACAATTCCA  180
V  93.5% (229/245)  IGHV3-23*01  137  ........T...C...T.............GT.G..............................G......A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  T  V  S  V  Q  M  D  S  L  S  A  E  D  T  A  V  Y  Y  C  A  S  T  L  L  D  K  W  G  
                    Query_9345   181  AGAACACGGTGTCTGTGCAAATGGACAGCCTGAGCGCCGAGGACACGGCCGTATATTACTGTGCGTCGACTCTGCTTGACAAATGGGGCC  270
V  93.5% (229/245)  IGHV3-23*01  227  ........C...A.C........A..........A..............................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  92.9% (39/42)    IGHJ4*02     7    ---------------------------------------------------------------------------.....T.C.......  21

                                                                 
                                      Q  G  T  L  V  T  V  S  P  
                    Query_9345   271  AGGGAACCCTGGTCACCGTCTCCCCAG  297
J  92.9% (39/42)    IGHJ4*02     22   .......................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_20283

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	22	2	6	73.3
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	241	27	6	88


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  R  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_9346   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTAGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.0% (241/274)  IGHV4-34*01  26   ........T.......T............T................C..T...G........------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_9346   91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.0% (241/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_9346   181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.0% (241/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_9346   271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.0% (241/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_249828

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD1-26*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCACTGC	GAGCTACT	CT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGCACTGCGAGCTACTCTTTTGACTAC	ARDRTASYSFDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  Y  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9347   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATTATTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ........................................G.AG............C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  F  Y  N  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  T  N  N 
                    Query_9347   91   TGGATTGGATATGTCTTTTACAATGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGTTAGACACGACCAACAAC  180
V  93.1% (228/245)  IGHV4-59*01  139  ........G...A...A.....G.....G..........................................AG........T....G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  N  S  V  T  T  A  D  T  A  V  Y  Y  C  A  R  D  R  T  A  S  Y  S  F  D 
                    Query_9347   181  CAGTTCTCCCTAAAACTGAACTCTGTGACCACTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGCACTGCGAGCTACTCTTTTGAC  270
V  93.1% (228/245)  IGHV4-59*01  229  ...........G..G....G..........G..................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD1-26*01  11   --------------------------------------------------------------------------........--------  18
J  100.0% (43/43)   IGHJ4*02     6    ------------------------------------------------------------------------------------......  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9347   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (43/43)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_249829

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           300     9e-84
IGHD2-15*01                                                                                           12.2    36   
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTC	ATTGTA	T	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTCATTGTATTACGGTATGGACGTC	ARGVADDGWRGGRRVSLYYGMDV	261	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	43	8	0	84.3
CDR2-IMGT	126	146	21	14	7	0	66.7
FR3-IMGT	147	260	114	98	16	0	86
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	230	38	0	85.8


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  V  S  L  T  C  A  V  Y  G  G  S  F  S  G  H  C  W  T  W  I  R  
                    Query_9348   1    CAGGACTGGTGAAGCCCTCGGAAACCGTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTTAGTGGTCACTGCTGGACCTGGATTCGCC  90
V  85.8% (230/268)  IGHV4-34*01  26   ........T.......T.....G...C..................................C......T...A.....G......C....  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  T  P  G  K  G  L  E  W  I  G  E  M  N  H  K  G  R  T  T  Y  N  P  S  L  M  S  R  V  T  
                    Query_9348   91   AGACACCAGGGAAGGGACTGGAATGGATTGGTGAGATGAATCACAAAGGCAGGACGACCTACAACCCGTCGCTAATGAGTCGAGTCACCA  180
V  85.8% (230/268)  IGHV4-34*01  116  ..C.C...........G.....G........G..A..C.....T.GT..A..C..C.A............C..C.A..............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  L  S  L  R  L  T  S  L  I  A  A  D  T  A  M  Y  Y  C  A  R  G  
                    Query_9348   181  TCTCAGTGGACACGTCCAAGAATCAGCTCTCCCTGAGATTGACCTCTTTAATCGCCGCGGACACGGCTATGTATTACTGTGCGAGAGGCG  270
V  85.8% (230/268)  IGHV4-34*01  206  .A.....A..............C...T.........AGC...G....G.G.C................G...................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  

                                      --------------------CDR3-IMGT----------------------------->                               
                                      V  A  D  D  G  W  R  G  G  R  R  V  S  L  Y  Y  G  M  D  V  W  G  Q  G  V  P  V  T  V  S  
                    Query_9348   271  TGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTCATTGTATTACGGTATGGACGTCTGGGGCCAGGGAGTCCCGGTCACCGTCTCCT  360
D  100.0% (6/6)     IGHD2-15*01  6    -------------------------------------......-----------------------------------------------  11
J  89.6% (43/48)    IGHJ6*02     15   --------------------------------------------.......................A..GAC.A...............  60

                                        
                                      S 
                    Query_9348   361  CA  362
J  89.6% (43/48)    IGHJ6*02     61   ..  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_18596

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD3-16*02                                                                                           12.2    31   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTATCG	ACATTGGTTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTATTTGACTAT	ARHYRHWLFDY	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	238	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  L  T  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9349   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCCTCACCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (238/251)  IGHV4-39*01  49   ...............................G....A...G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9349   91   CTGGAGTGGATTGGGAGTTTGTATTATAGTGGCAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  94.8% (238/251)  IGHV4-39*01  139  ..................A.C...........G...............................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  H  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  H  W  L  F 
                    Query_9349   181  AAGAACCACTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACATTATCGACATTGGTTATTT  270
V  94.8% (238/251)  IGHV4-39*01  229  ........G..C........G....G...T.......................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-16*02  25   -----------------------------------------------------------------------......-------------  30
J  95.3% (41/43)    IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_9349   271  GACTATTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  310
J  95.3% (41/43)    IGHJ4*02     9    .....C...........................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_20280

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           350     8e-99
IGHD3-10*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCACTC	CTATGGATCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTCCTATGGATCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9350   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_9350   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTGGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*03  139  ..................................G.................................T.....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  G  H  S  Y  G  S  G 
                    Query_9350   181  AAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTTTTACTGCGCGAGAGGTCACTCCTATGGATCGGGG  270
V  94.8% (237/250)  IGHV4-31*03  229  .....................C...G...........................G.A......T.......--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.5% (21/22)    IGHD3-10*01  7    -----------------------------------------------------------------------------......T......  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9350   271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  95.5% (21/22)    IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_51313

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            315     5e-88
IGHD2-15*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCATTGTGGA	AGTGGTGG	CTGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCATTGTGGAAGTGGTGGCTGTTTCTACTTTGACATC	ARVHCGSGGCFYFDI	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	46	5	0	90.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	224	23	0	90.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  S  D  S  I  S  G  S  D  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_9351   1    ACCCTGTCCCTCACCTGCGCTGTCTCTAGTGACTCCATCAGCGGTTCTGACTGGTGGACTTGGATCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.7% (224/247)  IGHV4-4*02   49   ...........................G...G..........A..AG.A.........G....G..........................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  S  A  D  T  H  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  N  S  K 
                    Query_9351   91   GAGTGGATCGGAGAGATCCATCATAGTGCGGACACCCACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAACTCTAAG  180
V  90.7% (224/247)  IGHV4-4*02   139  ........T..G..A...T.........G.AG....A..............................................G..C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  E  L  R  S  V  T  A  A  D  A  A  L  Y  Y  C  A  R  V  H  C  G  S  G  G  C 
                    Query_9351   181  AACCAATTCTCCCTGGAGCTGAGGTCTGTGACCGCCGCGGACGCGGCCCTGTATTACTGTGCGAGAGTTCATTGTGGAAGTGGTGGCTGT  270
V  90.7% (224/247)  IGHV4-4*02   229  .....G.........A.......C..................A.....G..................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD2-15*01  11   ------------------------------------------------------------------------------........----  18

                                      -------------->                                  
                                       F  Y  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9351   271  TTCTACTTTGACATCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  95.7% (45/47)    IGHJ4*02     2    --..........TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_264069

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           442     2e-126
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	74	0	0	100
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	112	2	0	98.2
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	288	5	0	98.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  
                    Query_9352   3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCA  92
V  98.3% (288/293)  IGHV5-51*01  2    .................................................................................G...T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_9352   93   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACA  182
V  98.3% (288/293)  IGHV5-51*01  92   G...................................................................................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_9352   183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  98.3% (288/293)  IGHV5-51*01  182  .................................C........................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_9352   273  CCGCCATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  362
V  98.3% (288/293)  IGHV5-51*01  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (17/17)   IGHD5-18*01  2    -------------------------------.................------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_9352   363  CCTCAG  368
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_264068

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           297     7e-83
IGHD3-10*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTTTCAGG	TACTATGGTTCGG	CGGATTCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTTCAGGTACTATGGTTCGGCGGATTCT	ARAFRYYGSADS	235	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	120	21	17	1	3	81
FR3-IMGT	121	234	114	102	12	0	89.5
CDR3-IMGT (germline)	235	241	7	7	0	0	100
Total	N/A	N/A	244	219	22	3	89.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  D  S  Y  F  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9353   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCAGTGATTCGTACTTCAGCTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  89.8% (219/244)  IGHV4-59*01  49   ...................C...........G..........AG..AC....GG.......................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y     S  G  S  S  S  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  I  S  K  N 
                    Query_9353   91   TGGATTGGGTATATCTAT---AGTGGGAGCTCCAGCTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCTGACATATCCAAGAAC  177
V  89.8% (219/244)  IGHV4-59*01  139  ..................TAC.........A...A......................................TA....CG.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  T  Y  Y  C  A  R  A  F  R  Y  Y  G  S  A  D 
                    Query_9353   178  CACTTCTCCCTGAGGTTGACCTCTGTGACCGCTGCGGACACGGCCACATATTACTGTGCGAGAGCTTTCAGGTACTATGGTTCGGCGGAT  267
V  89.8% (219/244)  IGHV4-59*01  229  ..G..........A.C...G.........................GTG................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD3-10*01  5    ------------------------------------------------------------------------.............-----  17

                                      -->                                  
                                       S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9353   268  TCTTGGGGCCAGGGAGCCCTCGTCACCGTCTCCTCAG  304
J  94.1% (32/34)    IGHJ4*02     15   ---............A....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_321334

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           360     1e-101
IGHD6-19*01                                                                                           21.8    0.040 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCAGG	GCAGTGGCTGG	CACG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTC	ARVPGQWLARGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	238	8	0	96.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9354   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.7% (238/246)  IGHV3-53*01  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  M  Y  S  G  G  T  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  G  N  S  K  
                    Query_9354   91   AGTGGGTCTCAGTTATGTATAGCGGTGGGACCACATACTACGCAGAGTCCGTGAAGGGCCGATTCACCATCTCAAGAGGCAATTCCAAGA  180
V  96.7% (238/246)  IGHV3-53*01  137  ................T...........T.G...............C..........................C....A...........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  G  Q  W  L  A  R  
                    Query_9354   181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGTCCCAGGGCAGTGGCTGGCACGCG  270
V  96.7% (238/246)  IGHV3-53*01  227  ..................................................................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD6-19*01  8    -------------------------------------------------------------------------...........------  18
J  100.0% (46/46)   IGHJ6*02     17   ----------------------------------------------------------------------------------------..  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9354   271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (46/46)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_233578

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           346     2e-97
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	TGACCC	GTTATTAC	CTGGGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCACAGTGACCCGTTATTACCTGGGATACTACTTTGACTAC	STVTRYYLGYYFDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	50	1	0	98
CDR2-IMGT	102	131	30	27	3	0	90
FR3-IMGT	132	245	114	113	1	0	99.1
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	237	229	8	0	96.6


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  N  T  L  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  
                    Query_9355   16   GTGCAGCCTCTGGATTCACTTTCAGTAACACCTTGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTA  105
V  96.6% (229/237)  IGHV3-15*01  65   .............................G...G.....G..................................................  154
                                         A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  

                                      -------CDR2-IMGT---------><----------------------------------------------------FR3-IMGT---
                                      K  T  K  T  D  S  G  T  A  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  
                    Query_9355   106  AAACCAAAACTGATAGTGGGACAGCAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGT  195
V  96.6% (229/237)  IGHV3-15*01  155  ...G..........G........A..................................................................  244
                                      K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  

                                      -------------------------------------------------><----------------CDR3-IMGT--------------
                                      Y  L  Q  L  N  S  L  K  T  E  D  T  A  V  Y  Y  C  S  T  V  T  R  Y  Y  L  G  Y  Y  F  D  
                    Query_9355   196  ATCTGCAATTGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTTCCACAGTGACCCGTTATTACCTGGGATACTACTTTGACT  285
V  96.6% (229/237)  IGHV3-15*01  245  ........A.........................................A......---------------------------------  301
                                      Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                                   
D  100.0% (8/8)     IGHD3-22*01  21   ---------------------------------------------------------------........-------------------  28
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------------------------------------............  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9355   286  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (48/48)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_264061

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGAA	GTGGATACA	AGTTTGGTCAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGAAGTGGATACAAGTTTGGTCATAACTGGTTCGACCCC	ARDPTGSGYKFGHNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  H  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9356   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATAAGTCATTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  93.5% (229/245)  IGHV4-59*01  49   ...............................G......C...AG............C................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  T  S  V  D  T  T  K  N 
                    Query_9356   91   TGGATTGGATATATCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCACGTCAGTAGACACGACCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G......T...................................................TA............T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  S  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  K  F 
                    Query_9356   181  CAGTTCTCCCTGAGCCTCAGTTCTGTGACCGTTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCCTACCGGAAGTGGATACAAGTTT  270
V  93.5% (229/245)  IGHV4-59*01  229  .............AG..G..C..........C.................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD5-18*01  1    ----------------------------------------------------------------------------.........-----  9

                                      -------------------->                                  
                                       G  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9356   271  GGTCATAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTAACCGTCTCCTCAG  325
J  98.0% (48/49)    IGHJ5*02     3    ------...................................C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_264063

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           396     2e-112
IGHD3-16*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGTCG	ATGACTACGTT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGTCGATGACTACGTTTTTGACTAT	AREVDDYVFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  P  S  V  T  V  S  C  K  A  S  G  D  T  F  R  N  N
                    Query_9357   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGCCCTCGGTGACGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAGAAACAA  90
V  93.5% (272/291)  IGHV1-69*01  6    ..................G.....................T.........A.......................G.........C.G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  F  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  M  F  G  T  V  N  Y  A  Q
                    Query_9357   91   TGCTTTCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATGTTTGGAACAGTCAACTACGCACA  180
V  93.5% (272/291)  IGHV1-69*01  96   ....A...G.........................................................C.....T....CA...........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  Q  D  R  V  T  I  S  A  D  E  S  T  S  T  A  Y  M  E  L  T  S  L  R  S  D  D  T  A
                    Query_9357   181  GAACTTCCAGGACAGAGTCACGATTTCCGCGGACGAATCTACGAGCACAGCCTACATGGAGCTGACCAGCCTGAGATCTGATGACACGGC  270
V  93.5% (272/291)  IGHV1-69*01  186  ...G.......G.............A.............C.........................G...............G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        V  Y  Y  C  A  R  E  V  D  D  Y  V  F  D  Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_9357   271  CGTGTATTACTGTGCGAGAGAGGTCGATGACTACGTTTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  350
V  93.5% (272/291)  IGHV1-69*01  276  .....................-----------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                              
D  90.9% (10/11)    IGHD3-16*01  6    --------------------------....T......-------------------------------------------  16
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------........C...........................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_45253

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD2-2*02                                                                                            14.1    8.2  
IGHJ3*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGGGCCCTAGAAG	GCTATAC	AGAG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGCCCTAGAAGGCTATACAGAGGCTTTTGATATC	ARGGALEGYTEAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  N  Y  Y  W  S  W  M  R  Q  P  P  G  K  G  L  E 
                    Query_9358   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAATTACTACTGGAGCTGGATGCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*01  49   ........................................G..G..................C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  C  F  Y  Y  G  G  N  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  G  T  S  K  N 
                    Query_9358   91   TGGATTGGGTGTTTCTATTACGGTGGAAACACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTGGGCACGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*01  139  ..........A.A........A....G.G....A..................................A.....A.A.............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  N  S  L  T  S  A  D  T  A  V  Y  Y  C  A  R  G  G  A  L  E  G  Y  T  E 
                    Query_9358   181  CAGTTCTCCCTGAAGCTGAACTCTCTGACGTCTGCGGACACGGCCGTATATTACTGTGCGAGAGGGGGGGCCCTAGAAGGCTATACAGAG  270
V  93.0% (227/244)  IGHV4-59*01  229  ...................G....G....CG................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD2-2*02   24   -------------------------------------------------------------------------------.......----  30

                                      ----------->                                  
                                       A  F  D  I  W  G  Q  G  T  A  V  T  V  S  S  
                    Query_9358   271  GCTTTTGATATCTGGGGCCAAGGGACAGCGGTCACCGTCTCTTCAG  316
J  95.7% (44/46)    IGHJ3*02     5    ...........................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_264065

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           344     6e-97
IGHD6-13*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCTGG	GCAGCAG	GTGAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGCTGGGCAGCAGGTGACTGACTAT	ARDAGQQVTDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  N  Y  G  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_9359   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTCAGTAACTATGGCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  94.0% (235/250)  IGHV3-21*01  47   ....................................CC.......G....A..............................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  G  S  D  Y  I  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9359   91   AGTGGGTCTCATCCATTAGTAGTGGTAGTGATTACATATACTACGTAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-21*01  137  .......................A.....AG..............C............................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      R  N  S  V  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  A  G  Q  Q  V  T  
                    Query_9359   181  GGAACTCAGTGTTTCTACAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTATATTACTGTGCGAGAGATGCTGGGCAGCAGGTGACTG  270
V  94.0% (235/250)  IGHV3-21*01  227  A.......C...A...G...................C...............G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-13*01  8    ----------------------------------------------------------------------------.......-------  14
J  92.7% (38/41)    IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  P  G  T  Q  V  T  V  S  S  
                    Query_9359   271  ACTATTGGGGCCCGGGAACCCAGGTCACCGTCTCCTCAG  309
J  92.7% (38/41)    IGHJ4*02     10   ....C.......A........T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_264064

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TGGGCCTC	CTATGATAATAGTGGTCATTAC	GGCCCGCGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATGGGCCTCCTATGATAATAGTGGTCATTACGGCCCGCGATTTGACTCC	AKWASYDNSGHYGPRFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  D  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9360   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGGGATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.5% (227/248)  IGHV3-23*01  47   ..............................................CT..........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  H  S  V  D  H  T  F  Y  A  D  S  V  K  G  R  F  I  V  S  R  D  N  S  
                    Query_9360   91   AGTGGGTCTCAAGTATTAGTCATAGTGTTGATCACACATTCTACGCAGACTCCGTGAAGGGCCGATTCATCGTCTCCAGAGACAATTCCA  180
V  91.5% (227/248)  IGHV3-23*01  137  ...........GC.......GG.....G..G.AG.....A........................G....C.A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  L  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  W  A  S  Y  D  N  S  
                    Query_9360   181  AGAACACTCTCTATCTGCTAATGAGTAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAATGGGCCTCCTATGATAATAGTG  270
V  91.5% (227/248)  IGHV3-23*01  227  .......G..G.......A.....AC..........................A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.9% (20/22)    IGHD3-22*01  7    ----------------------------------------------------------------------------........G.....  20

                                      IMGT--------------------->                                
                                      G  H  Y  G  P  R  F  D  S  W  G  Q  G  A  L  V  T  V  S  S
                    Query_9360   271  GTCATTACGGCCCGCGATTTGACTCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTC  328
D  90.9% (20/22)    IGHD3-22*01  21   ..T.....--------------------------------------------------  28
J  95.1% (39/41)    IGHJ4*02     6    -----------------.......A.............A...................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_45256

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD6-25*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTC	ARQSSAGRTKYGMDV	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	68	6	0	91.9
CDR1-IMGT	77	100	24	17	7	0	70.8
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	273	22	0	92.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  R  S  S  G  Y  D  F  L  
                    Query_9361   3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGCTAAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGAGTTCTGGGTACGACTTTCTCG  92
V  92.5% (273/295)  IGHV5-51*01  2    .............................G.G..A.....C.........................A.G.......A...AG....AC.A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_9361   93   ACTACTGGATCGTCTGGGTGCGCCAAATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACA  182
V  92.5% (273/295)  IGHV5-51*01  92   G...........G............G..........................................................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  
                    Query_9361   183  GTCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGCGCAGTCTGAAGGCCTCGGACA  272
V  92.5% (273/295)  IGHV5-51*01  182  .C...............................C...............C..................A....C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_9361   273  CCGCCAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCT  362
V  92.5% (273/295)  IGHV5-51*01  272  ......T..................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD6-25*01  7    --------------------------.......---------------------------------------------------------  13
J  100.0% (48/48)   IGHJ6*02     15   -----------------------------------------------...........................................  57

                                           
                                      S  S 
                    Query_9361   363  CCTCA  367
J  100.0% (48/48)   IGHJ6*02     58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_45257

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	263	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	36	9	0	80
CDR1-IMGT	47	76	30	23	1	6	76.7
FR2-IMGT	77	127	51	45	6	0	88.2
CDR2-IMGT	128	148	21	14	7	0	66.7
FR3-IMGT	149	262	114	105	9	0	92.1
CDR3-IMGT (germline)	263	270	8	8	0	0	100
Total	N/A	N/A	269	231	32	6	85.9


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R 
                    Query_9362   2    CTGGTGAAACCCACACAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGC  91
V  85.9% (231/269)  IGHV4-34*01  31   ...T....G..TT.GG........T................C..T............------........C.......G....AT....  114
                                       L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R 

                                      ------FR2-IMGT---------------------><-----CDR2-IMGT-----><--------------------------------
                                       Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T 
                    Query_9362   92   CAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCCTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACC  181
V  85.9% (231/269)  IGHV4-34*01  115  .....C...........G.....G................A..ATAG.....G..C.........C.C.......A..............  204
                                       Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T 

                                      --------------------FR3-IMGT----------------------------------------------------><--------
                                       I  S  V  D  T  S  K  N  Q  F  S  P  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G 
                    Query_9362   182  ATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCCGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGC  271
V  85.9% (231/269)  IGHV4-34*01  205  ..A...............................T...GC............C........................C...........-  293
                                       I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G 

                                      -----------------CDR3-IMGT------------------------>                                 
                                       H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_9362   272  CACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  355
D  91.7% (11/12)    IGHD6-19*01  7    ---------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_322554

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           367     6e-104
IGHD3-16*01                                                                                           12.2    36    
IGHJ6*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCC	TTGGGG	CGGC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCTTGGGGCGGCCTACGGTTTGGACGTC	ARPLGAAYGLDV	292	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	68	6	0	91.9
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	45	6	0	88.2
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	105	9	0	92.1
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	264	29	0	90.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  E  P  G  D  S  L  T  I  S  C  Q  V  S  G  Y  I  F  T  
                    Query_9363   5    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCGGGGGACTCTCTGACGATCTCCTGTCAGGTTTCTGGATACATCTTCACCC  94
V  90.1% (264/293)  IGHV5-51*03  2    ....G..............................A..........G.......A..........A...G...........G...T...A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      H  Y  W  I  A  W  V  R  Q  V  A  G  K  G  L  E  W  M  G  V  I  Y  P  D  D  S  D  A  R  Y  
                    Query_9363   95   ACTATTGGATCGCCTGGGTGCGCCAGGTGGCCGGCAAAGGCCTAGAGTGGATGGGGGTCATCTATCCTGACGACTCTGATGCCAGATACA  184
V  90.1% (264/293)  IGHV5-51*03  92   G...C.......G.............A..C....G........G............A............GT.........A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  L  V  T  I  S  V  D  K  S  L  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_9363   185  GCCCGTCCTTTCAAGGCCTGGTCACCATCTCAGTCGACAAGTCCCTCAGTACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACA  274
V  90.1% (264/293)  IGHV5-51*03  182  ..........C.......A..............C..........A....C....................C...................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                 
                                      T  A  I  Y  F  C  A  R  P  L  G  A  A  Y  G  L  D  V  W  G  Q  G  T  A  V  V  V  S  S 
                    Query_9363   275  CCGCCATTTACTTCTGTGCGAGACCCCTTGGGGCGGCCTACGGTTTGGACGTCTGGGGCCAAGGGACCGCGGTCGTCGTCTCGTCA  360
V  90.1% (264/293)  IGHV5-51*03  272  .......G..T.A..........---------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                
D  100.0% (6/6)     IGHD3-16*01  16   ---------------------------......-----------------------------------------------------  21
J  89.8% (44/49)    IGHJ6*02     14   -------------------------------------.......A.......................A.....AC......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_322555

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           349     2e-98
IGHD3-16*02                                                                                           52.6    2e-11
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AG	ATTATGATTACGTTTGGGGGAGTTATC	TCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGATTATGATTACGTTTGGGGGAGTTATCTCCACTAC	AREDYDYVWGSYLHY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  F  D  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9364   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCGACAGTACTTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*02  49   ..................................C..T.....G...C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N  Y  S  G  S  T  N  Y  S  P  S  L  K  S  R  V  T  I  S  E  D  T  S  K  N 
                    Query_9364   91   TGGATTGGATATATTAATTACAGTGGGAGCACCAACTACAGCCCCTCCCTCAAGAGTCGAGTCACCATATCAGAAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*02  139  ........G.....CT........................A................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  E  D  Y  D  Y  V  W  G  S 
                    Query_9364   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGGCCGCTGCGGACACGGCCGTGTACTACTGTGCGAGAGAAGATTATGATTACGTTTGGGGGAGT  270
V  95.5% (234/245)  IGHV4-59*02  229  ...........................A......................T..............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (27/27)   IGHD3-16*02  3    -------------------------------------------------------------------.......................  25

                                      ----------->                                  
                                       Y  L  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9364   271  TATCTCCACTACTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  316
D  100.0% (27/27)   IGHD3-16*02  26   ....------------------------------------------  29
J  97.4% (38/39)    IGHJ4*02     10   -------............................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_322556

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD2-8*02                                                                                            12.2    31   
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGA	GTACTG	CCACCGAGTCTAGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGAGTACTGCCACCGAGTCTAGGTGGTTCGACCCC	ARDQSTATESRWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9365   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   .......................................................G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  H  S  G  T  T  Q  Y  N  P  S  L  K  S  R  V  T  I  S  M  D  T  S  K  K 
                    Query_9365   91   TGGATTGGTTACATCCATCACAGTGGGACCACCCAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATGGACACGTCCAAGAAG  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G..T...T..T.........G....A.C....................................G.A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  S  T  A  T  E  S  R 
                    Query_9365   181  CAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTTTATTATTGTGCGAGAGATCAGAGTACTGCCACCGAGTCTAGG  270
V  93.5% (229/245)  IGHV4-59*01  229  .............A......C...........T..............G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-8*02   9    ----------------------------------------------------------------------......--------------  14

                                      ----------->                                  
                                       W  F  D  P  W  G  H  G  T  L  V  T  V  S  S  
                    Query_9365   271  TGGTTCGACCCCTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.8% (45/46)    IGHJ5*02     6    ....................G.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_186544

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           311     4e-87
IGHD5-12*01                                                                                           18.0    0.60 
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGCGATGTATGAT	TATAGTGGC	ACAATATAT	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGCGATGTATGATTATAGTGGCACAATATATTGGTACTTCGATCTC	ARQAMYDYSGTIYWYFDL	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	225	26	0	89.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  M  S  S  R  T  Y  P  W  A  W  V  R  Q  P  P  R  K  G 
                    Query_9366   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATGAGTAGTAGGACCTACCCCTGGGCCTGGGTCCGCCAGCCCCCACGGAAGGGC  90
V  89.6% (225/251)  IGHV4-39*01  49   ...............................G......C..C.....T.GT...TA.....G....A..............G.......G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  N  T  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S 
                    Query_9366   91   CTGGAGTGGATTGGGACCATCTATAACACTGGGAGGACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCGTATCCGTGGACACGTCG  180
V  89.6% (225/251)  IGHV4-39*01  139  ................GT......T.T.G......C....................................A.......A........C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       N  N  Q  F  S  L  H  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  A  M  Y  D  Y  S 
                    Query_9366   181  AACAACCAGTTCTCCCTGCACCTGAACTCTGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACAAGCGATGTATGATTATAGT  270
V  89.6% (225/251)  IGHV4-39*01  229  ..G...............A.G....G...........................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD5-12*01  6    ------------------------------------------------------------------------------------......  11

                                      -IMGT--------------------->                                  
                                       G  T  I  Y  W  Y  F  D  L  W  G  R  G  S  L  V  A  V  S  S  
                    Query_9366   271  GGCACAATATATTGGTACTTCGATCTCTGGGGCCGTGGCTCCCTGGTCGCTGTCTCCTCAG  331
D  100.0% (9/9)     IGHD5-12*01  12   ...----------------------------------------------------------  14
J  95.9% (47/49)    IGHJ2*01     5    ------------...........................A........A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_322551

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           357     1e-100
IGHD3-22*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGCCCACCGATTAATCTTC	GATAGAAGTGGTTATTACT	TGCGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGCCCACCGATTAATCTTCGATAGAAGTGGTTATTACTTGCGCGAC	ASAHRLIFDRSGYYLRD	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9367   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGCAAGGGC  90
V  96.0% (238/248)  IGHV4-31*03  49   ...................................................................................G......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  L  I  S  G  D  T  S 
                    Query_9367   91   CTGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCGACTACAACCCGTCCCTCAAGAGTCGAGTTCTCATATCAGGAGACACGTCT  180
V  96.0% (238/248)  IGHV4-31*03  139  ...............T.......................T.............................AC........T..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  S  A  H  R  L  I  F  D 
                    Query_9367   181  AAGAACCAGTTCTCCCTCAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCATTTATTACTGTGCGAGCGCCCACCGATTAATCTTCGAT  270
V  96.0% (238/248)  IGHV4-31*03  229  .................G.A...............................G.G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  94.7% (18/19)    IGHD3-22*01  11   ---------------------------------------------------------------------------------------...  13

                                      MGT-------------------->                                  
                                       R  S  G  Y  Y  L  R  D  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9367   271  AGAAGTGGTTATTACTTGCGCGACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  328
D  94.7% (18/19)    IGHD3-22*01  14   ..T.............------------------------------------------  29
J  97.2% (35/36)    IGHJ4*02     13   ----------------------..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_65578

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            408     4e-116
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGTTAGTACTGGTTAT	CGCACT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGATCGGCTAGCCTCCTATGTTAGTACTGGTTATCGCACTTACTTCTACTACGGTATAGACGTC	TRDRLASYVSTGYRTYFYYGIDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  L  T  G  Y
                    Query_9368   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTGACCGGCTA  90
V  94.8% (276/291)  IGHV1-2*04   6    ................................AG...............................................C........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  P  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  R  G  G  T  N  Y  A  Q
                    Query_9368   91   CTATATGCACTGGGTGCGACAGCCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGGGGTGGCACAAACTATGCACA  180
V  94.8% (276/291)  IGHV1-2*04   96   ......................G..............................................T....................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  N  T  S  V  S  T  D  Y  M  E  L  S  R  R  R  A  D  N  P  A
                    Query_9368   181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGAACACGTCCGTCAGCACAGACTACATGGAGCTGAGCAGGCGGAGGGCTGACAACCCGGC  270
V  94.8% (276/291)  IGHV1-2*04   186  ...............................G........A.........C....................T...AT.....G..A....  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  T  R  D  R  L  A  S  Y  V  S  T  G  Y  R  T  Y  F  Y  Y  G  I  D  V  W  G  Q
                    Query_9368   271  CGTGTATTTCTGTACGAGAGATCGGCTAGCCTCCTATGTTAGTACTGGTTATCGCACTTACTTCTACTACGGTATAGACGTCTGGGGCCA  360
V  94.8% (276/291)  IGHV1-2*04   276  ........A....G.......---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  89.5% (17/19)    IGHD3-22*01  7    ---------------------------------.....A.....G.......--------------------------------------  25
J  93.0% (53/57)    IGHJ6*02     6    ----------------------------------------------------------....A............G..............  37

                                                               
                                        G  T  T  V  S  V  P  S 
                    Query_9368   361  AGGGACCACGGTCTCCGTCCCCTCA  385
J  93.0% (53/57)    IGHJ6*02     38   .............A.....T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_255185

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           414     6e-118
IGHD6-19*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              106     4e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTAGTAGTATTGGG	GCAGTGGCTG	ACCG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTAGTAGTATTGGGGCAGTGGCTGACCGCTACTATTACTACGGTATGGACGTC	ARSSSIGAVADRYYYYGMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_9369   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  95.8% (277/289)  IGHV1-69*06  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  M  F  G  T  T  N  Y  A  Q
                    Query_9369   91   TGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGGGAATCATTCCTATGTTTGGTACAACAAACTACGCACA  180
V  95.8% (277/289)  IGHV1-69*06  96   ..C................................................A..G.....C.....C.........G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  N  T  A  Y  M  E  L  S  S  L  R  S  E  G  P  A
                    Query_9369   181  GAAATTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGGGCCGGC  270
V  95.8% (277/289)  IGHV1-69*06  186  ...G........................................G......................................ACA....  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        V  Y  Y  C  A  R  S  S  S  I  G  A  V  A  D  R  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T
                    Query_9369   271  CGTGTATTACTGTGCGAGATCTAGTAGTATTGGGGCAGTGGCTGACCGCTACTATTACTACGGTATGGACGTCTGGGGCCAAGGGACCAC  360
V  95.8% (277/289)  IGHV1-69*06  276  ...................-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD6-19*01  8    ----------------------------------..........----------------------------------------------  17
J  98.3% (57/58)    IGHJ6*02     5    ------------------------------------------------......C...................................  46

                                                      
                                        V  T  V  S  S 
                    Query_9369   361  GGTCACCGTCTCCTCA  376
J  98.3% (57/58)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_322559

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           333     1e-93
IGHD1-1*01                                                                                            18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAG	TGGAACGAC	GGG	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGAGTGGAACGACGGGGACGAC	ARHEWNDGDD	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	232	19	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  N  N  L  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9370   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGAGACTCCATCAGCAATAATCTTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  92.4% (232/251)  IGHV4-39*01  49   ...................C.........T.G...........G..G.AG.......................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  A  I  Y  Y  T  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9370   91   CTGGGGTGGATTGGAGCTATCTATTATACTGGAAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  92.4% (232/251)  IGHV4-39*01  139  ....A.........GAG...........G...G.G.......................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       K  N  K  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  E  W  N  D  G  D 
                    Query_9370   181  AAGAACAAGTTCTCCCTGAAGCTGACCTCTGTCACCGCCGCAGACACGGCTGTGTACTACTGTGCGAGACATGAGTGGAACGACGGGGAC  270
V  92.4% (232/251)  IGHV4-39*01  229  ......C..................G......G.......................T..............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD1-1*01   9    ---------------------------------------------------------------------------.........------  17
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9370   271  GACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_186542

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           341     5e-96
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAG	GGGGGGGTT	GGCGGGAGCCTCTTAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGGGGGGGTTGGCGGGAGCCTCTTATTACTTTGACCAC	ARDRGGLAGASYYFDH	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9371   1    GGTCCCTGAGACTCTCCTGTGTAGCGTCTGGATTCACCTTCAGCAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-33*01  47   .....................C.....................T..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  L  I  W  Y  D  G  D  N  K  D  Y  R  D  T  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_9371   91   AGTGGTTGGCACTTATATGGTATGATGGAGATAATAAGGACTATAGAGACACCGTGCAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-33*01  137  .....G.....G.................AG......AT.....GC....T.....A.................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  M  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  G  G  L  A  G  
                    Query_9371   181  AGAACACGATGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTACTACTGTGCGAGAGATAGGGGGGGGTTGGCGGGAG  270
V  93.6% (234/250)  IGHV3-33*01  227  ........C.......G......................................T..............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD3-16*01  18   -------------------------------------------------------------------------.....A...--------  26

                                      T------------------>                                  
                                      A  S  Y  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9371   271  CCTCTTATTACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  324
J  95.7% (44/46)    IGHJ4*02     3    --------.........T...............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_186541

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     9e-121
IGHD5-18*01                                                                                           16.1    2.6   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTTCCCAACCGAAATGTCAAAAC	GTGGATAC	CTGCGCCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTCCCAACCGAAATGTCAAAACGTGGATACCTGCGCCCTCTAC	ARLSQPKCQNVDTCALY	291	341	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	73	1	0	98.6
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	282	11	0	96.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  
                    Query_9372   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTTCCA  93
V  96.2% (282/293)  IGHV5-51*03  2    ......................................................................T...............A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_9372   94   GTTACTGGATCGCCTGGGTGCGCCAGATGCCGGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  183
V  96.2% (282/293)  IGHV5-51*03  92   .C..........G..................C..........................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  H  L  Q  W  T  S  L  K  A  S  D  
                    Query_9372   184  GGCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCCACCTGCAATGGACCAGCCTGAAGGCCTCGGACA  273
V  96.2% (282/293)  IGHV5-51*03  182  .C......................................................T.......G....G....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  I  Y  Y  C  A  R  L  S  Q  P  K  C  Q  N  V  D  T  C  A  L  Y  W  G  Q  G  T  L  V  
                    Query_9372   274  CCGCCATTTATTATTGTGCGAGACTTTCCCAACCGAAATGTCAAAACGTGGATACCTGCGCCCTCTACTGGGGCCAGGGAACCCTGGTCA  363
V  96.2% (282/293)  IGHV5-51*03  272  .......G.....C.........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD5-18*01  1    -----------------------------------------------........-----------------------------------  8
J  97.4% (37/38)    IGHJ4*02     11   ----------------------------------------------------------------..........................  36

                                                  
                                      T  V  S  A  
                    Query_9372   364  CCGTCTCCGCAG  375
J  97.4% (37/38)    IGHJ4*02     37   ........T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_195257

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           341     5e-96
IGHD3-22*01                                                                                           48.8    3e-10
IGHJ2*01                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGAC	GTATTACTATGATAGTAGTGGTTAT	GCCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGACGTATTACTATGATAGTAGTGGTTATGCCCACTGGCACTTCGATCTC	ARATYYYDSSGYAHWHFDL	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	126	24	23	1	0	95.8
FR3-IMGT	127	240	114	112	2	0	98.2
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  S  V  T  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_9373   2    CCCTGTCCCTCACCTGCGCAGCCTCTGGATTCAGCGTCACTAGTTATGAAATGAACTGGGTCCGGCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  94.3% (232/246)  IGHV3-48*03  50   .....AGA...T....T................C.T...G........................C.........................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  H  I  S  S  S  G  S  T  T  Y  Y  G  D  S  V  K  G  R  V  T  I  S  R  D  N  A  K  
                    Query_9373   92   GGGTGTCACACATTAGTAGTAGTGGTAGTACCACATACTACGGAGACTCTGTGAAGGGCCGAGTCACCATCTCCAGAGACAACGCCAAGA  181
V  94.3% (232/246)  IGHV3-48*03  140  ....T...T........................T........C...................T...........................  229
                                      W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><-----------------------CDR3-IM
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  T  Y  Y  Y  D  S  S  
                    Query_9373   182  ACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGCGACGTATTACTATGATAGTAGTG  271
V  94.3% (232/246)  IGHV3-48*03  230  ..................................................................------------------------  295
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (25/25)   IGHD3-22*01  1    ----------------------------------------------------------------------....................  20

                                      GT----------------------->                                  
                                      G  Y  A  H  W  H  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9373   272  GTTATGCCCACTGGCACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  331
D  100.0% (25/25)   IGHD3-22*01  21   .....-------------------------------------------------------  25
J  98.0% (50/51)    IGHJ2*01     3    ---------.....T.............................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_6768

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-10*01                                                                                           37.2    9e-07 
IGHJ3*02                                                                                              62.2    6e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCATCG	CTATGGTTCGGGGAGTTAT	GC	TGATA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCATCGCTATGGTTCGGGGAGTTATGCTGATATG	ARGHRYGSGSYADM	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  I  V  S  G  V  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9374   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ...................C...........G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  G  R  V  S  I  S  V  D  T  S 
                    Query_9374   91   CTGGAGTGGATTGGGTACATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGGGTCGAGTTTCCATATCTGTAGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ..........................C.................................A........A.......A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  R  Y  G  S  G 
                    Query_9374   181  AAGAATCAGTTCTCCCTGAAGCTGAGTTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCATCGCTATGGTTCGGGG  270
V  96.4% (241/250)  IGHV4-31*03  229  .....C....................C...............................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (19/19)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      -------------->                                  
                                       S  Y  A  D  M  W  G  R  G  T  M  V  T  V  S  S  
                    Query_9374   271  AGTTATGCTGATATGTGGGGCCGCGGGACAATGGTCACCGTCTCTTCAG  319
D  100.0% (19/19)   IGHD3-10*01  20   ......-------------------------------------------  25
J  92.7% (38/41)    IGHJ3*02     10   --------......C.......AA.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_288898

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     7e-91
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TCTAGATGGCCCCAAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTAGATGGCCCCAATTACTACTACGGGATGCACGTC	ARDLDGPNYYYGMHV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  S  L  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9375   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCTCCCTCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTGGAA  90
V  92.2% (226/245)  IGHV4-59*01  49   ...................C................A..............................................A.....G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  F  S  G  N  T  N  Y  N  P  S  L  K  G  R  V  N  I  S  G  D  T  S  Q  N 
                    Query_9375   91   TGGATTGGCTATATTCATTTCAGTGGAAACACCAACTACAACCCCTCCCTCAAGGGTCGGGTCAACATATCAGGAGACACGTCCCAGAAC  180
V  92.2% (226/245)  IGHV4-59*01  139  ........G.....CT...A......G.G.........................A....A....C........T..........A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  D  G  P  N  Y  Y  Y 
                    Query_9375   181  CAGTTCTCCCTGAAGGTGAACTCTGTTACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGATCTAGATGGCCCCAATTACTACTAC  270
V  92.2% (226/245)  IGHV4-59*01  229  ...............C...G......G..........................C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.6% (48/53)    IGHJ6*02     9    ---------------------------------------------------------------------------------.........  17

                                      ----------->                                
                                       G  M  H  V  W  G  P  G  T  A  V  I  V  S  S
                    Query_9375   271  GGGATGCACGTCTGGGGCCCAGGGACCGCGGTCATCGTCTCCTC  314
J  90.6% (48/53)    IGHJ6*02     18   ..T...G............A.......A......C.........  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_288892

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           324     8e-91
IGHD3-22*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-22*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGACA	GGGGGC	GGTTATGACT	T	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACAGGGGGCGGTTATGACTTACAACTGGTTCGACCCC	RDRGRL*LTTGSTP	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	26	27	25	1	1	92.6
CDR1-IMGT	27	56	30	28	2	0	93.3
FR2-IMGT	57	107	51	46	5	0	90.2
CDR2-IMGT	108	128	21	17	4	0	81
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	251	231	19	1	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T   A  V  S  L  V  A  P  S  A  V  V  F  T  T  G  P  G  S  A  S  P  Q  G  G  G
                    Query_9376   1    ACCCTGTCCCTCAC-TGCAGTGTCTCTGGTGGCTCCATCAGCAGTAGTCTTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAGGGGG  89
V  92.0% (231/251)  IGHV4-39*01  49   ..............C....C............................AG...........G.......................A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                        W  S  G  L  A  Q  S  F  L  V  G  P  P  T  T  T  R  P  S  R  V  E  S  P  Y  P  W  T  R  P
                    Query_9376   90   CTGGAGTGGATTGGCACAATCTTTTCTGGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCCTATCCGTGGACACGCCC  179
V  92.0% (231/251)  IGHV4-39*01  139  ..............G.GT....A..A.A......G.....................................A.......A......T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                        R  A  S  S  P  *  N  *  A  L  *  P  P  Q  T  R  L  C  I  I  V  R  D  R  G  R  L  *  L  T
                    Query_9376   180  AAGAGCCAGTTCTCCCTGAAACTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGCGACAGGGGGCGGTTATGACTTAC  269
V  92.0% (231/251)  IGHV4-39*01  229  ....A...............G......................................C......A....-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-22*01  20   -----------------------------------------------------------------------------......T...---  29
J  100.0% (51/51)   IGHJ5*02     1    ----------------------------------------------------------------------------------------..  2

                                      -------------->                                  
                                        T  G  S  T  P  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_9376   270  AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (51/51)   IGHJ5*02     3    .................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_288893

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_9377   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.8% (277/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_9377   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_9377   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9377   271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.8% (277/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_9377   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_37801

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD6-19*01                                                                                           21.8    0.046
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCGGGGCCAACGGGCGGTAAGGCATGC	CAGTGGCTGGT	TCGCGGTTGGGAATCCCAACGACGATTATTATC	ACGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGGGCCAACGGGCGGTAAGGCATGCCAGTGGCTGGTTCGCGGTTGGGAATCCCAACGACGATTATTATCACGGGATGGACGTC	ARGRGQRAVRHASGWFAVGNPNDDYYHGMDV	238	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  E  S  F  S  G  Y  F  W  T  W  I  R  Q  P  P  G  T  G  L  E 
                    Query_9378   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGAGTCCTTCAGTGGTTACTTCTGGACTTGGATCCGCCAGCCCCCAGGGACGGGGCTGGAG  90
V  94.7% (232/245)  IGHV4-34*01  49   ...............................G.................A.....GC......................A..........  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  T  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9378   91   TGGATTGGGGAAATAAATCATAGTGGAAGCACCACCTACAGCCCGTCCCTCAAGAGTCGAGTCACCATCTCCGTAGACACGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-34*01  139  ..............C...................A.....A...........................A..A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  G  R  G  Q  R  A  V  R  H 
                    Query_9378   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCGGACACGGCTCTGTATTATTGTGCGAGAGGCCGGGGCCAACGGGCGGTAAGGCAT  270
V  94.7% (232/245)  IGHV4-34*01  229  ...............C.............................G.......C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      ---------CDR3-IMGT----------------------------------------->                              
                                       A  S  G  W  F  A  V  G  N  P  N  D  D  Y  Y  H  G  M  D  V  W  G  Q  G  T  T  V  R  V  S 
                    Query_9378   271  GCCAGTGGCTGGTTCGCGGTTGGGAATCCCAACGACGATTATTATCACGGGATGGACGTCTGGGGCCAAGGGACCACGGTCCGCGTCTCG  360
D  100.0% (11/11)   IGHD6-19*01  9    --...........-----------------------------------------------------------------------------  19
J  91.5% (43/47)    IGHJ6*02     16   ----------------------------------------------....T..............................AC......C  59

                                         
                                       S 
                    Query_9378   361  TCA  363
J  91.5% (43/47)    IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_288891

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         350     8e-99
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGCACTAT	TATGCTAGCAGTGGTTATT	T	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGCACTATTATGCTAGCAGTGGTTATTTCTACTTTGACTAC	ARGHYYASSGYFYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_9379     1    ACCCTGTCCCTCACCTGCGCCGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  95.2% (236/248)  IGHV4-30-4*01  49   ..................A.T............................A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  R  I  Y  Y  N  G  R  T  Y  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9379     91   CTGGAGTGGATTGGGCGCATCTATTACAATGGGAGGACCTATTACAGCCCGTCCCTCAAGAGTCGAGTTACCATATCAGTGGACACGTCC  180
V  95.2% (236/248)  IGHV4-30-4*01  139  ...............TA...........G......C.....C....A.................................A.........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                         K  N  Q  F  S  L  M  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  Y  Y  A  S  S 
                    Query_9379     181  AAGAACCAGTTCTCCCTGATGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTTCTGTGCCAGGGGGCACTATTATGCTAGCAGT  270
V  95.2% (236/248)  IGHV4-30-4*01  229  ...................A......................................A.........----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  89.5% (17/19)    IGHD3-22*01    8    ------------------------------------------------------------------------------....A...T...  19

                                        GT------------------>                                  
                                         G  Y  F  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9379     271  GGTTATTTCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  89.5% (17/19)    IGHD3-22*01    20   .......------------------------------------------------  26
J  100.0% (47/47)   IGHJ4*02       2    --------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_288896

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           291     6e-81
IGHD2-15*01                                                                                           14.1    8.6  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGGGGATTTCGAGAA	GGTGGTA	AATCGGTCAGT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGGGGATTTCGAGAAGGTGGTAAATCGGTCAGTTTTGCCTAC	ARDGGFREGGKSVSFAY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  S  T  Y  T  M  N  W  L  R  Q  A  P  G  K  E  P  
                    Query_9380   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGGTTCAGTACTTATACTATGAACTGGCTTCGCCAGGCTCCAGGGAAGGAGCCGC  90
V  87.2% (218/250)  IGHV3-21*01  47   ....................................CC.......GC....GC.........G.C...................G..T.G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  S  V  S  G  D  G  T  Y  I  Y  Y  A  E  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9380   91   AATGGGTCGCATCTGTGAGTGGAGATGGAACCTACATATACTACGCAGAATCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  87.2% (218/250)  IGHV3-21*01  137  .G......T....CA.T...A.TAG.A.T.GT.................C...G...................................A  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      E  N  S  V  F  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  G  G  F  R  E  G  
                    Query_9380   181  AGAACTCAGTGTTTCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCTGTCTATTATTGTGCGAGAGACGGGGGATTTCGAGAAGGTG  270
V  87.2% (218/250)  IGHV3-21*01  227  ........C...A.......................C...............G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-15*01  14   --------------------------------------------------------------------------------------....  17

                                      GT-------------------->                                  
                                      G  K  S  V  S  F  A  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_9380   271  GTAAATCGGTCAGTTTTGCCTACTGGGGCCAGGGAACCCTTGTCATCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD2-15*01  18   ...------------------------------------------------------  20
J  93.0% (40/43)    IGHJ4*02     6    --------------....A.....................G....C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_288897

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     1e-109
IGHD1-1*01                                                                                            10.3    137   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGA	ACAAC	CCGTCCCGATA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACCCGTCCCGATATTTGACTTC	ATTREQPVPIFDF	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	69	5	0	93.2
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	106	8	0	93
CDR3-IMGT (germline)	291	294	4	4	0	0	100
Total	N/A	N/A	291	269	22	0	92.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  E  I  S  C  K  G  S  G  Y  S  L  T  
                    Query_9381   4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGGAGATCTCCTGCAAGGGCTCTGGATATAGCTTAACCA  93
V  92.4% (269/291)  IGHV5-51*01  2    ..G...............................A..................A..........T.....T........C.....T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  V  P  G  K  G  L  E  W  I  G  I  I  Y  P  A  D  S  E  T  K  Y  
                    Query_9381   94   GTTATTGGATCGCCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATTGGGATCATCTATCCTGCTGACTCTGAAACCAAATACA  183
V  92.4% (269/291)  IGHV5-51*01  92   .C..C.......G.............A.........................G................G.........T....G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  S  S  S  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_9381   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCGGCCGACAAGTCCAGCAGCTCCGCCTTCTTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  92.4% (269/291)  IGHV5-51*01  182  ...............................A.............T....A......A.C..............................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  A  I  Y  Y  C  A  T  T  R  E  Q  P  V  P  I  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9381   274  CCGCCATATATTATTGTGCGACGACTAGAGAACAACCCGTCCCGATATTTGACTTCTGGGGGCAGGGAACCCTGGTCACCGTCTCCTCAG  363
V  92.4% (269/291)  IGHV5-51*01  272  .......G.....C.......---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (5/5)     IGHD1-1*01   4    -------------------------------.....------------------------------------------------------  8
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------.......A......C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_288894

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           352     3e-99
IGHD4-17*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCA	ACGGTGACT	CGGAGGGATTTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAACGGTGACTCGGAGGGATTTGGCTACTACTACGGTATGGACGTC	ARGNGDSEGFGYYYGMDV	246	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  D  S  I  N  S  G  S  H  Y  W  S  W  I  R  Q  Y  P  G  K  G  
                    Query_9382   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCAACAGTGGTAGTCACTACTGGAGCTGGATCCGCCAGTACCCAGGGAAGGGCC  93
V  95.2% (237/249)  IGHV4-31*01  50   .....TCC...A..................G........G.......G..T.......................C...............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  R  L  V  T  I  S  V  D  T  S  
                    Query_9382   94   TGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGACTAGTTACCATATCAGTAGACACGTCTA  183
V  95.2% (237/249)  IGHV4-31*01  140  .............................................................T............................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  N  G  D  S  E  G  
                    Query_9382   184  AGAACCAGTTCTCCCTGAAGGTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCAACGGTGACTCGGAGGGAT  273
V  95.2% (237/249)  IGHV4-31*01  230  ....................C...G............................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD4-17*01  6    ------------------------------------------------------------------------.........---------  14

                                      IMGT--------------------->                                 
                                      F  G  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9382   274  TTGGCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  100.0% (55/55)   IGHJ6*02     8    ----.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_93352

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           291     6e-81
IGHD2-15*01                                                                                           12.2    33   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGCCCACGGTTTTCTACGACAGTGAC	GGTGGAAGC	CGATTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATGGGCCCACGGTTTTCTACGACAGTGACGGTGGAAGCCGATTCCTTGACTCC	VRDGPTVFYDSDGGSRFLDS	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  H  F  T  F  S  S  Y  V  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9383   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCCATTTCACCTTCAGTAGCTATGTTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  87.2% (218/250)  IGHV3-30*04  47   ............................TGGA...................C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  S  I  S  Y  D  G  N  D  I  D  S  T  D  S  V  R  G  R  F  T  I  S  R  D  N  Y  
                    Query_9383   91   AGTGGCTGGCTTCCATATCATATGATGGAAATGACATCGACTCCACAGACTCCGTGCGGGGCCGATTCACCATCTCCAGAGACAATTACA  180
V  87.2% (218/250)  IGHV3-30*04  137  .....G....AGTT................G.A.T.AAT...A.G...........AA.............................C..  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  D  I  L  Y  L  Q  M  D  S  L  R  G  D  D  T  A  V  Y  Y  C  V  R  D  G  P  T  V  F  Y  
                    Query_9383   181  AGGACATACTATATCTGCAAATGGACAGCCTGAGAGGTGACGACACGGCTGTCTATTATTGTGTAAGAGATGGGCCCACGGTTTTCTACG  270
V  87.2% (218/250)  IGHV3-30*04  227  ..A...CG..G............A............C...G...........G.....C....CG.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      D  S  D  G  G  S  R  F  L  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9383   271  ACAGTGACGGTGGAAGCCGATTCCTTGACTCCTGGGGCCAGGGAACCCTCGTCACCGTCTCCTCAG  336
D  88.9% (8/9)      IGHD2-15*01  14   --------.....T...-------------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    ------------------------......A..................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_107145

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         285     4e-79
IGHD3-22*01                                                                                           14.1    8.5  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCATATGCCTACGAAGACAGAAA	TTATTAC	N/A	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATTCATATGCCTACGAAGACAGAAATTATTACTTCGACCCC	ARDSYAYEDRNYYFDP	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	12	9	0	57.1
FR3-IMGT	127	240	114	98	16	0	86
CDR3-IMGT (germline)	241	248	8	7	1	0	87.5
Total	N/A	N/A	248	215	33	0	86.7


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  S  V  S  G  Y  S  V  N  S  G  Y  Y  W  A  W  I  R  Q  S  P  G  K  G  L 
                    Query_9384     1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTTACTCCGTAAACAGTGGTTACTACTGGGCCTGGATCCGCCAGTCCCCAGGGAAGGGGCTG  90
V  86.7% (215/248)  IGHV4-38-2*02  49   ..................A.................A.C.G.................G.........G...C.................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  V  Y  R  T  G  N  M  Y  Y  S  P  S  F  E  S  R  V  T  L  L  V  D  K  A  K 
                    Query_9384     91   GAGTGGATTGGGAGTGTCTATCGTACCGGTAATATGTACTACAGTCCGTCCTTCGAGAGTCGAGTCACTCTATTAGTAGACAAGGCGAAG  180
V  86.7% (215/248)  IGHV4-38-2*02  139  ...............A......A..GT..G.GC.CC.......AC......C..A.............CA...C........C.T.C...  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                         N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  Y  A  Y  E  D  R 
                    Query_9384     181  AACCAGTTCTCGTTGAGGTTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGCGAGATTCATATGCCTACGAAGACAGA  270
V  86.7% (215/248)  IGHV4-38-2*02  229  ...........CC...A.C...G.................................C......A....----------------------  296
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         

                                        ----------------->                                  
                                         N  Y  Y  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9384     271  AATTATTACTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (7/7)     IGHD3-22*01    22   --.......-------------------------------------------  28
J  100.0% (43/43)   IGHJ5*02       9    ---------...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_107146

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           405     3e-115
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGCA	TATTACTATGATAGTAGT	ATTTATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGCATATTACTATGATAGTAGTATTTATCTTGACTAC	ARAAYYYDSSIYLDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  R  T  S  R  D  S  F  T  N  H 
                    Query_9385   2    CAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCTGGGGCCTCGGTGAAGGTCTCCTGCAGGACTTCTCGTGACTCCTTTACCAACCAT  91
V  94.8% (274/289)  IGHV1-18*01  7    ....................T.......................A................A.G.....G..T..A.........G.T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  N  T  N  Y  A  Q 
                    Query_9385   92   GGATTTAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAAACTATGCACAG  181
V  94.8% (274/289)  IGHV1-18*01  97   ..TA.C......................................................G.............................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_9385   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (274/289)  IGHV1-18*01  187  ...C......................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  A  A  Y  Y  Y  D  S  S  I  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_9385   272  GTTTATTACTGTGCGAGAGCCGCATATTACTATGATAGTAGTATTTATCTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCA  361
V  94.8% (274/289)  IGHV1-18*01  277  ..G................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (18/18)   IGHD3-22*01  2    ------------------------..................------------------------------------------------  19
J  97.6% (41/42)    IGHJ4*02     7    -------------------------------------------------.........................G...............  47

                                       
                                       
                    Query_9385   362  G  362
J  97.6% (41/42)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_219413

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           310     1e-86
IGHD5-12*01                                                                                           12.2    30   
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCC	GTGGAT	TAAGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCGTGGATTAAGCTTC	ATRGLSF	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  D  M  N  W  L  R  Q  A  P  G  K  G  P  
                    Query_9386   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACTTTCAGTAATTACGACATGAACTGGCTCCGCCAGGCTCCTGGGAAGGGGCCGG  90
V  90.2% (222/246)  IGHV3-48*03  47   .....................C...............C.......G...T..A.........G.............A..........T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  D  I  T  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_9386   91   AGTGGGTCTCATCCATTAGTAGTCGTGGAGATATCACATACTACGCGGACTCAGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.2% (222/246)  IGHV3-48*03  137  .......T....A..........A....TAG..C..T.........A.....T...A.................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  S  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  T  R  G  L  S  F  W  G  
                    Query_9386   181  AGAACTCACTGTCCCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTCTTTATTACTGTGCGACCCGTGGATTAAGCTTCTGGGGCC  270
V  90.2% (222/246)  IGHV3-48*03  227  ............AT......................C...G.........G...............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD5-12*01  1    ---------------------------------------------------------------------......---------------  6
J  94.3% (33/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  A  Q  V  T  V  S  S  
                    Query_9386   271  AGGGAGCCCAGGTCACCGTCTCCTCAG  297
J  94.3% (33/35)    IGHJ4*02     22   .....A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_107140

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCGGAGGTTCC	ACTATGG	CCACCTGACACCAC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCGGAGGTTCCACTATGGCCACCTGACACCACTTGAGTAC	ASRRFHYGHLTPLEY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  N  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_9387   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAACTGGGTCCGCCAGACCCCAGGGAGGGGGCTGGAG  90
V  92.1% (223/242)  IGHV4-34*01  49   .......................................................G....A........C.........A..........  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  V  N  H  S  G  N  S  N  S  N  P  S  L  K  S  R  V  T  I  L  V  D  T  S  K  N 
                    Query_9387   91   TGGCTTGGGGAAGTCAATCATAGTGGCAACAGCAACTCCAACCCGTCCCTCAAGAGTCGAGTCACCATATTAGTCGACACGTCCAAGAAC  180
V  92.1% (223/242)  IGHV4-34*01  139  ...A........A.............A.G..C.....A................................C...A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       R  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  S  R  R  F  H  Y  G  H  L  T 
                    Query_9387   181  CGGTTCTCCCTGAAACTGACTTCTGTGACCGCCGCGGACACGGCTCTTTATTATTGTGCGAGTCGGAGGTTCCACTATGGCCACCTGACA  270
V  92.1% (223/242)  IGHV4-34*01  229  .A............G....GC........................G.G.....C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD3-10*01  6    -------------------------------------------------------------------------.......----------  12

                                      ----------->                                  
                                       P  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9387   271  CCACTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.6% (41/42)    IGHJ4*02     7    ----....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_219415

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGTGAGGAAGGA	TACTATGATACTAGTGGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGTGAGGAAGGATACTATGATACTAGTGGTTATTCGGACTAT	AKDGEEGYYDTSGYSDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  T  P  G  K  G  L  
                    Query_9388   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGATATGCCATGTCCTGGGTCCGCCAGACTCCAGGGAAGGGCCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ...........................................C..C.........AG.............G.............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  V  S  G  S  G  G  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9388   91   AGTGGGTCTCAACAGTGAGTGGTAGTGGAGGTGGCACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  ...........G.TA.T...........T...A..........C..............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  I  Y  Y  C  A  K  D  G  E  E  G  Y  Y  
                    Query_9388   181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAACCGAGGACACGGCCATATATTACTGTGCGAAAGATGGTGAGGAAGGATACTATG  270
V  93.6% (234/250)  IGHV3-23*01  227  ..............C....................G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.5% (21/22)    IGHD3-22*01  5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                      D  T  S  G  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9388   271  ATACTAGTGGTTATTCGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.5% (21/22)    IGHD3-22*01  12   ...G...........------------------------------------------  26
J  97.5% (39/40)    IGHJ4*02     9    -----------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_93354

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           349     2e-98
IGHD1-1*01                                                                                            10.3    117  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGCAC	CCAACCCCGATGGCA	ACAAC	CTA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGCACCCAACCCCGATGGCAACAACCTACC	STQPRWQQPT	249	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	253	5	4	1	0	80
Total	N/A	N/A	253	238	15	0	94.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  I  F  S  T  T  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9389   1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCATTTTCAGTACCACCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.1% (238/253)  IGHV3-15*01  47   .......T...............G............C........A.G.........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  I  D  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_9389   91   AGTGGGTTGGCCGTATTAAAAGCAAAATTGATGGTGAGACAACAGACTACGCTGCACCCGTGAAGGGCAGATTCACCATCTCAAGAGATG  180
V  94.1% (238/253)  IGHV3-15*01  137  ...........................C........G...........................A.........................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  E  T  E  D  T  A  L  Y  Y  C  S  T  Q  P  R  W  Q  
                    Query_9389   181  ATTCAAAAAACACGCTGTATTTGCAAATGAACAGCCTGGAAACCGAGGACACAGCCCTTTACTACTGTAGCACCCAACCCCGATGGCAAC  270
V  94.1% (238/253)  IGHV3-15*01  227  ....................C.................A.................G.G..T.......C...-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (5/5)     IGHD1-1*01   4    ----------------------------------------------------------------------------------------..  5

                                      ------->                                  
                                      Q  P  T  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9389   271  AACCTACCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
D  100.0% (5/5)     IGHD1-1*01   6    ...---------------------------------------  8
J  100.0% (36/36)   IGHJ5*02     16   ------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_219417

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            341     5e-96
IGHD3-3*01                                                                                            12.2    32   
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ACCCGTGTGATGCC	TACCATCTTTGG	TG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACCCGTGTGATGCCTACCATCTTTGGTGACTACGGTATGGACGTC	ARTRVMPTIFGDYGMDV	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  D  S  I  T  S  S  H  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9390  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCATCACCAGTAGTCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  94.3% (232/246)  IGHV4-4*01  49   ...............................G........G.......A.........................................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  R  T  R  V  T  I  S  I  D  K  S  K 
                    Query_9390  91   GAGTGGATTGGGGAAATCTATTATAGTGGGACCACGAACTACAATCCGTCCCTCAGGACTCGAGTCACCATATCAATAGACAAGTCCAAG  180
V  94.3% (232/246)  IGHV4-4*01  139  .....................C.........G...C........C..........A..G................G..............  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  T  R  V  M  P  T  I  F 
                    Query_9390  181  AATCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTTCTGTGCCAGAACCCGTGTGATGCCTACCATCTTT  270
V  94.3% (232/246)  IGHV4-4*01  229  ..C...............................................G....G......G...------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD3-3*01  5    --------------------------------------------------------------------------------...G..T...  14

                                     -------------------->                                 
                                      G  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9390  271  GGTGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
D  83.3% (10/12)    IGHD3-3*01  15   ..----------------------------------------------------  16
J  100.0% (50/50)   IGHJ6*02    13   ----..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_219418

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           350     7e-99
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_9391   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.2% (236/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9391   91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCAAGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  95.2% (236/248)  IGHV4-39*01  139  .....................T..........................C............................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_9391   181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  95.2% (236/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_9391   271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_219419

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            308     4e-86
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCATCTTTCAA	CAGCAGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCATCTTTCAACAGCAGGTACTCGGGGTTTTGACTAC	ASHLSTAGTRGFDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	221	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  V  G  S  I  T  S  A  N  W  W  S  W  V  R  Q  P  P  G  R  G  L 
                    Query_9392   1    ACCCTGTCCCTCACCTGCGATGTCTCTGTTGGCTCCATCACCAGTGCTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAGGGGACTG  90
V  90.2% (221/245)  IGHV4-4*01   49   ...................C........G...........G....AG...................................A...G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  K  S  N  Y  S  P  S  L  R  G  R  V  T  I  S  V  D  K  S  M 
                    Query_9392   91   GAGTGGATTGGGGAAATCTATCATGGTGGGAAGTCCAACTACAGTCCGTCCCTCAGGGGTCGCGTCACCATTTCAGTGGACAAGTCCATG  180
V  90.2% (221/245)  IGHV4-4*01   139  ........................A......GCA.........AC..........A.A....A........A.....A..........A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  S  H  L  S  T  A  G  T  R 
                    Query_9392   181  AACCAGTTCTCCCTGAAGCTGAATTCTGTGACCGCCGCGGACACGGCCGTATACTTCTGTGCGAGCCATCTTTCAACAGCAGGTACTCGG  270
V  90.2% (221/245)  IGHV4-4*01   229  ......................GC..........................G..T.G.........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  90.0% (9/10)     IGHD6-13*01  12   ----------------------------------------------------------------------------....T.....----  21

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9392   271  GGTTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02     6    ---.....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_107148

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           294     6e-82
IGHD2-8*01                                                                                            14.1    8.1  
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-8*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCGGAC	AATGGTG	G	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCGCGGACAATGGTGGTTTGATATG	VRDRGQWWFDM	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  V  F  N  V  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9393   1    GGTCCCTGAGACTCTCCTGTGCAGGCAGTGGATTCGTCTTCAATGTTTATGGCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  87.6% (219/250)  IGHV3-21*01  47   ........................C.TC.......AC.....G.AGC...A.......C..........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  V  D  S  N  F  K  Y  Y  G  D  S  M  K  G  R  F  T  I  S  R  D  N  P  
                    Query_9393   91   AGTGGGTCTCATCCATTAGTGTTGACAGTAATTTCAAGTACTACGGAGACTCAATGAAGGGCCGATTCACCATCTCCAGAGACAACCCCA  180
V  87.6% (219/250)  IGHV3-21*01  137  ....................AG.AGT....G..A..TA.......C.......G................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  I  D  S  L  R  A  E  D  T  A  V  Y  F  C  V  R  D  R  G  Q  W  W  F  
                    Query_9393   181  AGAACTCACTGTATCTGCAAATCGATAGCCTGAGAGCCGAGGACACGGCTGTCTATTTTTGTGTGAGAGATCGCGGACAATGGTGGTTTG  270
V  87.6% (219/250)  IGHV3-21*01  227  ......................GA.C..........................G....AC....C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-8*01   14   ------------------------------------------------------------------------------.......-----  20
J  95.3% (41/43)    IGHJ3*02     8    --------------------------------------------------------------------------------------....  11

                                      ---->                                  
                                      D  M  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9393   271  ATATGTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  309
J  95.3% (41/43)    IGHJ3*02     12   ....C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_327008

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           385     4e-109
IGHD3-3*01                                                                                            14.1    9.0   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	261	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	20	4	0	83.3
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	21	0	0	100
FR3-IMGT	147	260	114	111	3	0	97.4
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	257	11	0	95.9


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  S  W  S  W  I  G  
                    Query_9394   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGCGGGTCCCTCAGTGGGTACTCCTGGAGCTGGATCGGCC  90
V  95.9% (257/268)  IGHV4-34*01  26   ........T.......T...................................T......T.......T....A.............C...  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  E  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_9394   91   AGCCCCCAGGGGAGGGGCTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCA  180
V  95.9% (257/268)  IGHV4-34*01  116  ...........A..............................................................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  A  D  T  S  K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_9394   181  TATCAGCAGACACGTCCAAGAACCATTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCG  270
V  95.9% (257/268)  IGHV4-34*01  206  ......T..................G............................................G.................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  

                                      ----------CDR3-IMGT------------------>                                  
                                      A  G  G  L  F  I  F  V  A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9394   271  CAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
D  100.0% (7/7)     IGHD3-3*01   9    --------------.......---------------------------------------------------  15
J  100.0% (43/43)   IGHJ4*02     6    -----------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_284405

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            325     3e-91
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTTCAAGGACAC	ATTACAATGGTTCGGGGAG	CCCCCCC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGAGTTCAAGGACACATTACAATGGTTCGGGGAGCCCCCCCACTTCGGTTTGGACGTC	VREFKDTLQWFGEPPHFGLDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  F  A  V  S  W  V  R  Q  A  P  G  M  G  L  
                    Query_9395   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTTAGTAATTTTGCCGTGAGCTGGGTCCGCCAGGCTCCAGGGATGGGGCTGG  90
V  91.6% (229/250)  IGHV3-9*01   47   ...............................A.........GA.G...A....A..CA.........G..A..........A...C....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  K  N  S  T  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9395   91   AGTGGGTCTCAGGTATTAGCTGGAAAAATTCTACCATAGGATATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.6% (229/250)  IGHV3-9*01   137  ...................T.....T.G.GG..G......C.................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  V  R  E  F  K  D  T  L  Q  
                    Query_9395   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGTAAGAGAGTTCAAGGACACATTACAAT  270
V  91.6% (229/250)  IGHV3-9*01   227  ...............................................................C..A...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  94.7% (18/19)    IGHD3-10*01  3    ----------------------------------------------------------------------------------.....T..  10

                                      DR3-IMGT-------------------------->                                 
                                      W  F  G  E  P  P  H  F  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9395   271  GGTTCGGGGAGCCCCCCCACTTCGGTTTGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTCCTCA  338
D  94.7% (18/19)    IGHD3-10*01  11   ...........---------------------------------------------------------  21
J  94.0% (47/50)    IGHJ6*02     13   ------------------...A....A................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_284404

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACGGTAAAGGG	GGTTATTACT	GT	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACGGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTACGGACGTC	ARTVKGVITVYQYFATDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  R  P  G  K  G  L  E 
                    Query_9396   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCGCCCAGGGAAGGGACTGGAG  90
V  91.4% (222/243)  IGHV4-34*01  49   ................................G...T..................G..............C............G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  I  S  L  D  M  S  K  N 
                    Query_9396   91   TGGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGAGTCTCCATATCATTAGACATGTCCAAGAAT  180
V  91.4% (222/243)  IGHV4-34*01  139  .............................C..................C..A...........A........G......C.........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  I  S  V  R  V  T  S  V  T  A  A  D  T  A  T  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y 
                    Query_9396   181  CAGATCTCCGTGAGGGTGACGTCTGTGACCGCCGCGGACACGGCTACTTATTACTGTGCGAGAACGGTAAAGGGGGTTATTACTGTCTAC  270
V  91.4% (222/243)  IGHV4-34*01  229  ...T.....C...A.C...GC........................GTG...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  20   --------------------------------------------------------------------------..........------  29
J  91.4% (53/58)    IGHJ6*02     5    --------------------------------------------------------------------------------------....  8

                                      -------------------->                                 
                                       Q  Y  F  A  T  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9396   271  CAGTACTTCGCTACGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  91.4% (53/58)    IGHJ6*02     9    T.C....A..G..T........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_284407

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           346     2e-97
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCG	ACGGTGAC	ACCGAGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACGGTGACACCGAGAATGACTAC	AADGDTENDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  S  F  G  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_9397   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGACTCACCTTCAGTAGCTTTGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGG  90
V  95.1% (233/245)  IGHV3-33*01  47   ................................T...............A......................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  K  K  Y  Y  T  D  S  V  K  G  R  F  I  I  S  R  D  N  S  
                    Query_9397   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAAGAAATACTATACAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCA  180
V  95.1% (233/245)  IGHV3-33*01  137  ..................................T.........G........................C....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  F  C  A  A  D  G  D  T  E  N  D  
                    Query_9397   181  AGAACACGTTGTATCTGCAGATGAACAGCCTGAGAGTCGACGACACGGCTGTCTATTTCTGTGCGGCCGACGGTGACACCGAGAATGACT  270
V  95.1% (233/245)  IGHV3-33*01  227  ........C..........A................C...G...........G....A.......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD4-17*01  6    ---------------------------------------------------------------------........-------------  13
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9397   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_284401

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           382     4e-108
IGHD3-3*01                                                                                            16.1    2.6   
IGHJ5*01                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAAACAGTCGGCACACTGAGA	ATTATACC	CCCACGTCGGACGTTCTAG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAAACAGTCGGCACACTGAGAATTATACCCCCACGTCGGACGTTCTAGGGTTCGACTCC	ARRNSRHTENYTPTSDVLGFDS	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	267	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_9398   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGTTA  90
V  92.1% (267/290)  IGHV5-51*01  6    .......................................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  W  R  Q  M  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_9398   91   CTGGATCGCTTGGTGGCGCCAGATGCCCGGGAAAGGCCTGGAATTAATGGGGATCATCTACCCTGGTGACTCTGATACTAGATACAATCC  180
V  92.1% (267/290)  IGHV5-51*01  96   ........GC...GT...........................G.GG..............T.................C.......GC..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  A  T  I  Y  A  D  K  S  I  S  T  A  Y  L  Q  M  S  S  L  K  A  S  D  T  A
                    Query_9398   181  GTCCTTCCAAGGTCAGGCCACCATTTATGCCGACAAGTCCATCAGCACCGCCTACCTGCAGATGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  92.1% (267/290)  IGHV5-51*01  186  ............C....T......C.CA.................................TG...........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------------CDR3-IMGT--------------------------->           
                                        K  Y  F  C  A  R  R  N  S  R  H  T  E  N  Y  T  P  T  S  D  V  L  G  F  D  S  W  G  Q  G
                    Query_9398   271  CAAATACTTCTGTGCGAGACGAAACAGTCGGCACACTGAGAATTATACCCCCACGTCGGACGTTCTAGGGTTCGACTCCTGGGGCCAGGG  360
V  92.1% (267/290)  IGHV5-51*01  276  ..TG..T.A...........----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-3*01   24   -----------------------------------------........-----------------------------------------  31
J  97.8% (44/45)    IGHJ5*01     7    --------------------------------------------------------------------...................A..  28

                                                             
                                        T  L  V  T  V  S  S  
                    Query_9398   361  AACCCTGGTCACCGTCTCCTCAG  383
J  97.8% (44/45)    IGHJ5*01     29   .......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_284400

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           382     3e-108
IGHD2-2*01                                                                                            43.0    2e-08 
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAACTTAGTC	TATTGTAGTAGGACCAGCTGCTATG	TCCCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAACTTAGTCTATTGTAGTAGGACCAGCTGCTATGTCCCATACTTTGACTAC	ARNLVYCSRTSCYVPYFDY	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	246	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9399   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  99.2% (246/248)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9399   91   CTGGAGTGGATTGGCTACATCTATTACAGTGGGAGCACCTACTACAATCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  99.2% (246/248)  IGHV4-31*03  139  ..............G................................C..........................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  N  L  V  Y  C  S  R 
                    Query_9399   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGAACTTAGTCTATTGTAGTAGG  270
V  99.2% (246/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  96.0% (24/25)    IGHD2-2*01   5    ------------------------------------------------------------------------------...........T  16

                                      3-IMGT----------------------->                                  
                                       T  S  C  Y  V  P  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9399   271  ACCAGCTGCTATGTCCCATACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  96.0% (24/25)    IGHD2-2*01   17   .............---------------------------------------------------  29
J  100.0% (46/46)   IGHJ4*02     3    ------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_284403

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            332     3e-93
IGHD3-16*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGG	GTTTTGGGGAGTTAT	TGGCCTTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGGGTTTTGGGGAGTTATTGGCCTTCA	ARRVLGSYWPS	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  S  F  F  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9400   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCTCCTTCTTTAGTTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (230/248)  IGHV3-7*03   47   .....................C.............A....TAG...C...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  T  E  K  Y  Y  L  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9400   91   AGTGGGTGGCCAACATAAAGCAAGATGGAACTGAGAAATACTATCTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.7% (230/248)  IGHV3-7*03   137  ..............................G.............G.............................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      R  R  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  R  V  L  G  S  Y  W  
                    Query_9400   181  GGAGGTCCCTGTACCTGCAAATGAACAGCCTAAGAGCCGAGGACACGGCCGTTTACTTCTGTGCGAGAAGGGTTTTGGGGAGTTATTGGC  270
V  92.7% (230/248)  IGHV3-7*03   227  A..AC..A.....T.................G....................G..T.A..........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD3-16*01  14   -----------------------------------------------------------------------....G..........----  28

                                      ---->                                  
                                      P  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9400   271  CTTCATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (34/34)   IGHJ4*02     15   -----..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_284409

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD1-7*01                                                                                            12.2    32   
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TCCGCGAGGA	TGGAAGTAC	GACGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATCCGCGAGGATGGAAGTACGACGGCTACTTCTACGGTATGGACGTC	ARDPRGWKYDGYFYGMDV	232	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	117	21	14	1	6	66.7
FR3-IMGT	118	231	114	109	5	0	95.6
CDR3-IMGT (germline)	232	239	8	7	1	0	87.5
Total	N/A	N/A	245	231	8	6	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9401   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCAATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   ...................................C......................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S        W  S  T  N  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_9401   91   TGGATTGGGTATATCTCTT------GGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCAGCATTTCAGTAGACACGTCCAAGAAT  174
V  94.3% (231/245)  IGHV4-59*01  139  ................A..ACAGTG.......................................C...A....................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  R  G  W  K  Y  D  G 
                    Query_9401   175  CAGTTCTCCCTGAAGCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGGATCCGCGAGGATGGAAGTACGACGGC  264
V  94.3% (231/245)  IGHV4-59*01  229  .................G.G..........................................A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (8/9)      IGHD1-7*01   9    ---------------------------------------------------------------------------.....C...------  17
J  98.2% (54/55)    IGHJ6*02     8    -----------------------------------------------------------------------------------------.  8

                                      -------------------->                                 
                                       Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9401   265  TACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  98.2% (54/55)    IGHJ6*02     9    ....A.................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_284408

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         346     2e-97
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAC	TACTATGATAGTAGTGGTT	CGTACTCCGAATC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACTACTATGATAGTAGTGGTTCGTACTCCGAATCTGATGCTTTTGATATC	ARHYYDSSGSYSESDAFDI	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	255	34	0	88.2


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  G  G  V  V  Q  P  G  K  S  L  R  L  S  C  E  V  S  G  F  T  F  S  S  F
                    Query_9402     1    GCAGCTGGTGCAGTCTGGAGGAGGCGTGGTCCAGCCTGGGAAATCCCTGAGACTCTCCTGTGAAGTCTCTGGATTCACCTTCAGTTCTTT  90
V  88.2% (255/289)  IGHV3-30-3*01  6    ..........G.......G......................GG...................C..C...................AGC.A  95
                                          Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          G  F  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  S  F  D  G  D  N  R  L  Y  A  D
                    Query_9402     91   TGGTTTCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCTCTTATTTCTTTTGATGGAGACAACAGATTATACGCAGA  180
V  88.2% (255/289)  IGHV3-30-3*01  96   ..C.A.G............................................AG....A..A.A.......AG...T.A..AC........  185
                                          A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  V  K  G  R  F  T  V  S  R  D  N  S  K  N  S  L  Y  L  Q  L  N  S  L  T  A  D  D  T  A
                    Query_9402     181  CTCCGTGAAGGGGCGATTCACCGTCTCGAGAGACAATTCCAAGAACTCGCTCTATCTACAACTGAACAGCCTGACAGCTGACGACACGGC  270
V  88.2% (255/289)  IGHV3-30-3*01  186  ............C.........A....C..................A....G.....G...A............G......G........  275
                                          S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                        ------------><-----------------------CDR3-IMGT----------------------->                    
                                          V  Y  Y  C  A  R  H  Y  Y  D  S  S  G  S  Y  S  E  S  D  A  F  D  I  W  G  Q  G  T  L  V
                    Query_9402     271  TGTCTATTACTGTGCGAGACACTACTATGATAGTAGTGGTTCGTACTCCGAATCTGATGCTTTTGATATCTGGGGCCAGGGGACACTAGT  360
V  88.2% (255/289)  IGHV3-30-3*01  276  ...G...............-----------------------------------------------------------------------  294
                                          V  Y  Y  C  A  R                                                                        
D  100.0% (19/19)   IGHD3-22*01    5    ----------------------...................-------------------------------------------------  23
J  91.7% (44/48)    IGHJ3*02       1    ------------------------------------------------------........................A......A.G..  36

                                                    
                                          T  V  P  S
                    Query_9402     361  CACCGTCCCTTC  372
J  91.7% (44/48)    IGHJ3*02       37   .......T....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_172382

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD3-22*01                                                                                           44.9    5e-09
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGG	ATTACTTTGATAGTAGTGGTTATTAC	CGGTCGAACTATCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGATTACTTTGATAGTAGTGGTTATTACCGGTCGAACTATCCTTTTGAGTAC	ARGDYFDSSGYYRSNYPFEY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  A  F  S  S  Y  D  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9403   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCGCCTTTAGCAGCTATGACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-23*01  47   ........................C..........A...............C.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  R  G  G  S  T  Y  H  A  D  S  V  R  G  R  F  S  I  S  R  D  N  S  
                    Query_9403   91   AGTGGGTCTCCGTTATCAGTGGTAGAGGTGGTAGCACATACCACGCAGACTCCGTGAGGGGCCGGTTCTCCATCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-23*01  137  ..........A.C...T........T...............T...............A..........A.....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  G  D  Y  F  D  S  S  
                    Query_9403   181  AGAACACGCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAGAGGGGATTACTTTGATAGTAGTG  270
V  94.4% (235/249)  IGHV3-23*01  227  ............A.....................................G...............A..---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  96.2% (25/26)    IGHD3-22*01  3    ------------------------------------------------------------------------......A...........  20

                                      R3-IMGT------------------------>                                  
                                      G  Y  Y  R  S  N  Y  P  F  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9403   271  GTTATTACCGGTCGAACTATCCTTTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  96.2% (25/26)    IGHD3-22*01  21   ........----------------------------------------------------------  28
J  97.7% (42/43)    IGHJ4*02     6    -----------------------.....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_205600

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           350     8e-99
IGHD6-13*01                                                                                           18.0    0.60 
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	GGTATAGCA	ATGCCTATTACCCCGTGGATTT	GTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGTATAGCAATGCCTATTACCCCGTGGATTTGTTCGACCCC	ARDRYSNAYYPVDLFDP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  P  F  S  S  Y  G  M  H  W  V  R  Q  S  P  G  K  G  L  
                    Query_9404   1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCCCTTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGTCTCCAGGCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-33*01  47   ....................G..............A.C.................................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  D  D  G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9404   91   AGTGGGTGGCAGTGATATGGGATGATGGAAGTAATAAGTTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (237/250)  IGHV3-33*01  137  .............T......T................A.A..................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  N  D  T  A  V  Y  Y  C  A  R  D  R  Y  S  N  A  Y  
                    Query_9404   181  AGAACACTCTGTATCTACAAATGAACAGCCTGAGAGCCAATGACACGGCTGTCTATTACTGTGCGAGAGATCGGTATAGCAATGCCTATT  270
V  94.8% (237/250)  IGHV3-33*01  227  .......G........G.....................G.G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-13*01  2    ------------------------------------------------------------------------.........---------  10

                                      GT-------------------->                                  
                                      Y  P  V  D  L  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9404   271  ACCCCGTGGATTTGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (44/44)   IGHJ5*02     8    -------------............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_172380

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           327     9e-92
IGHD2-15*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CCTCTGGTT	TTGTAGTGGTGCTAACTGCTACTC	GGACG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCCTCTGGTTTTGTAGTGGTGCTAACTGCTACTCGGACGACTTTGACTAC	ALWFCSGANCYSDDFDY	239	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	25	10	9	1	0	90
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	49	2	0	96.1
CDR2-IMGT	101	124	24	20	4	0	83.3
FR3-IMGT	125	238	114	114	0	0	100
CDR3-IMGT (germline)	239	240	2	2	0	0	100
Total	N/A	N/A	225	217	8	0	96.4


Alignments

                                      <FR1-IMGT><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><----
                                        G  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  R  G  L  E  W  V  S  Y  S  S
                    Query_9405   16   TGGAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGGAGTGGGTCTCATACAGTAG  105
V  96.4% (217/225)  IGHV3-21*01  66   ..C........................C..................................A....................C..T...  155
                                        A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S

                                      ---CDR2-IMGT------><----------------------------------------------------FR3-IMGT----------
                                        S  S  S  R  S  V  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q
                    Query_9405   106  TAGTAGTAGTCGTTCCGTATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCA  195
V  96.4% (217/225)  IGHV3-21*01  156  ..........A...A.A.........................................................................  245
                                        S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q

                                      ------------------------------------------><--------------------CDR3-IMGT-----------------
                                        M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  L  W  F  C  S  G  A  N  C  Y  S  D  D  F  D
                    Query_9405   196  AATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCCCTCTGGTTTTGTAGTGGTGCTAACTGCTACTCGGACGACTTTGA  285
V  96.4% (217/225)  IGHV3-21*01  246  .............................................---------------------------------------------  290
                                        M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                             
D  91.7% (22/24)    IGHD2-15*01  7    ------------------------------------------------------...........G..G.........------------  30
J  100.0% (45/45)   IGHJ4*02     4    -----------------------------------------------------------------------------------.......  10

                                      --->                                  
                                        Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9405   286  CTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  323
J  100.0% (45/45)   IGHJ4*02     11   ......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_172381

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           364     5e-103
IGHD1-26*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GTGGGAGCTACT	GGTCGGCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGTGGGAGCTACTGGTCGGCCTTTTGACTAC	ARGVGATGRPFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9406   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-48*03  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  H  T  I  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9406   91   AATGGGTTTCATACATTAGTAGTAGTGGTCATACCATAGACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (241/249)  IGHV3-48*03  137  .G...........................AG.......T...................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  H  C  A  R  G  V  G  A  T  G  R  
                    Query_9406   181  AGAACTCACTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATCACTGTGCGAGAGGCGTGGGAGCTACTGGTCGGC  270
V  96.8% (241/249)  IGHV3-48*03  227  ............A...........................................T............---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD1-26*01  7    -----------------------------------------------------------------------............-------  18

                                      ---------->                                  
                                      P  F  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_9406   271  CTTTTGACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  315
J  97.7% (42/43)    IGHJ4*02     6    --.........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_172386

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            339     2e-95
IGHD4-17*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAC	CTACGGTGACTAC	CTGGCAGGCCCCTGTAAGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACCTACGGTGACTACCTGGCAGGCCCCTGTAAGCTTGACTAC	ARTYGDYLAGPCKLDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  F  R  N  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9407   1    GGTCCCTGAGACTCTCCTGTGTAGGTTCTGGATTCACCTTTAGAAATTTTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  93.9% (232/247)  IGHV3-7*03   47   .....................C..CC.................T.GC.A....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  D  K  D  G  S  E  I  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9407   91   AGTGGGTGGCCAACATAGACAAAGATGGAAGTGAGATATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.9% (232/247)  IGHV3-7*03   137  .................A.GC...............A.....................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  S  L  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  T  Y  G  D  Y  L  A  
                    Query_9407   181  GGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTGTATTACTGTGCGAGGACCTACGGTGACTACCTGGCAG  270
V  93.9% (232/247)  IGHV3-7*03   227  A...........A...........................G..........................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (13/13)   IGHD4-17*01  4    ----------------------------------------------------------------------.............-------  16

                                      T------------------>                                  
                                      G  P  C  K  L  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9407   271  GCCCCTGTAAGCTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  324
J  97.6% (41/42)    IGHJ4*02     7    ------------....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_172387

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            414     5e-118
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	N/A	AGTACCAGCTGCT	CCCGGCACT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGAGTACCAGCTGCTCCCGGCACTTACTACTACTATGGTATGGACGTC	ARGVPAAPGTYYYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  N  Y
                    Query_9408  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATACACCTTCAGCAATTA  90
V  95.5% (278/291)  IGHV1-8*01  6    ..................G...............................................T................C..G...  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  N  W  V  R  Q  T  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_9408  91   TGATATCAACTGGGTGCGGCAGACCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACA  180
V  95.5% (278/291)  IGHV1-8*01  96   ..................A...G...................................................................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  D  L  S  S  L  R  S  E  D  T  A
                    Query_9408  181  AAAGTTTAAGGGCAGAGTCACCATGACCAGGGACACCTCCATAAGCACAGCCTACATGGACCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.5% (278/291)  IGHV1-8*01  186  G.....CC.......................A............................G.............................  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><----------------------CDR3-IMGT--------------------->                       
                                       V  Y  Y  C  A  R  G  V  P  A  A  P  G  T  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  A
                    Query_9408  271  CGTCTATTACTGTGCGCGAGGAGTACCAGCTGCTCCCGGCACTTACTACTACTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGC  360
V  95.5% (278/291)  IGHV1-8*01  276  ...G............A....---------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R  G                                                                     
D  100.0% (13/13)   IGHD2-2*01  14   ---------------------.............--------------------------------------------------------  26
J  96.5% (55/57)    IGHJ6*02    6    -------------------------------------------...........C.................................A.  52

                                               
                                       V  S  S 
                    Query_9408  361  CGTCTCCTCA  370
J  96.5% (55/57)    IGHJ6*02    53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_172384

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            378     3e-107
IGHD6-6*01                                                                                            21.8    0.044 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGTCGA	ATACCAGCTCGTCC	CCGAGGAAAGTCGG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGTCGAATACCAGCTCGTCCCCGAGGAAAGTCGGACTTTGACTAC	ARSRIPARPRGKSDFDY	264	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	77	27	25	2	0	92.6
FR2-IMGT	78	128	51	49	2	0	96.1
CDR2-IMGT	129	149	21	20	1	0	95.2
FR3-IMGT	150	263	114	108	6	0	94.7
CDR3-IMGT (germline)	264	268	5	5	0	0	100
Total	N/A	N/A	268	255	13	0	95.1


Alignments

                                     <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                        G  L  V  K  P  S  G  T  L  S  L  T  C  G  V  S  G  G  S  I  S  S  D  N  W  W  G  W  V  
                    Query_9409  1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCACCTGCGGTGTCTCTGGTGGCTCCATCAGCAGTGATAACTGGTGGGGTTGGGTCC  90
V  95.1% (255/268)  IGHV4-4*02  26   ................T.........................C.........................AG..........A.........  115
                                        G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                     --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                     R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  T  G  S  T  S  Y  N  P  S  L  K  S  R  V  
                    Query_9409  91   GCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAGATCTATCATACTGGGAGCACCAGCTACAACCCGTCCCTCAAGAGTCGAGTCA  180
V  95.1% (255/268)  IGHV4-4*02  116  .....................................A..........G...........A.............................  205
                                     R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                     ----------------------FR3-IMGT----------------------------------------------------><------
                                     T  I  S  V  D  K  S  K  N  Q  F  S  L  N  L  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  
                    Query_9409  181  CCATATCAGTCGACAAGTCCAAGAACCAGTTCTCCCTGAACCTGACGTCTGTGACCGCCGCGGACACGGCCATGTATTACTGTGCGAGGA  270
V  95.1% (255/268)  IGHV4-4*02  206  ..........A.............................G....GC........................G................--  293
                                     T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A     

                                     --------------CDR3-IMGT-------------------->                                  
                                     S  R  I  P  A  R  P  R  G  K  S  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9409  271  GTCGAATACCAGCTCGTCCCCGAGGAAAGTCGGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  348
D  92.9% (13/14)    IGHD6-6*01  5    -----...G..........-----------------------------------------------------------  18
J  100.0% (45/45)   IGHJ4*02    4    ---------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_172385

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     7e-97
IGHD3-9*01                                                                                            43.0    2e-08
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACCTC	GTATTACGATATTTTGACTGATTAT	AAAAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACCTCGTATTACGATATTTTGACTGATTATAAAACCTACTACTATTACGGAATGGACGTC	ARDTSYYDILTDYKTYYYYGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9410   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ..........................................................C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  G  G  G  S  K  T  Y  Y  A  E  S  A  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9410   91   AGTGGGTCTCAGGTATAAATGGTGGTGGTAGTAAGACATATTACGCAGAGTCCGCGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  ............C...T.G....A.....G...GC.....C........C....T...................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  R  D  T  S  Y  Y  D  I  
                    Query_9410   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCCTATATTATTGTGCGAGAGATACCTCGTATTACGATATTT  270
V  94.0% (235/250)  IGHV3-23*01  227  ....................................C.............G.......C.......A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  96.0% (24/25)    IGHD3-9*01   1    ----------------------------------------------------------------------------..............  14

                                      --CDR3-IMGT----------------------------->                                 
                                      L  T  D  Y  K  T  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_9410   271  TGACTGATTATAAAACCTACTACTATTACGGAATGGACGTCTGGGGCCAAGGGGCCACGGTCACCGTCTCCTCA  344
D  96.0% (24/25)    IGHD3-9*01   15   ......G....---------------------------------------------------------------  25
J  94.8% (55/58)    IGHJ6*02     5    ----------------.........C.....T.....................A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_172388

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           425     3e-121
IGHD2-2*02                                                                                            16.1    2.6   
IGHJ3*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-2*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAAGGAGT	TTGTAGTGATATGAGTTGCTATA	TTTGGGA	TGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAAGGAGTTTGTAGTGATATGAGTTGCTATATTTGGGATGACGCCTTTGATATT	ARDKGVCSDMSCYIWDDAFDI	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	281	9	0	96.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  I  Y 
                    Query_9411   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTAGCATCTAC  91
V  96.9% (281/290)  IGHV1-18*04  7    ..................................................................................C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_9411   92   GGTATCTCCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAACTATGCGCAG  181
V  96.9% (281/290)  IGHV1-18*04  97   ......AG.....................................................C........................A...  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_9411   182  AACCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.9% (281/290)  IGHV1-18*04  187  ..G.........................................................C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------------CDR3-IMGT-------------------------->               
                                       V  Y  Y  C  A  R  D  K  G  V  C  S  D  M  S  C  Y  I  W  D  D  A  F  D  I  W  G  Q  G  T 
                    Query_9411   272  GTGTACTACTGTGCGAGAGATAAAGGAGTTTGTAGTGATATGAGTTGCTATATTTGGGATGACGCCTTTGATATTTGGGGCCAAGGGACA  361
V  96.9% (281/290)  IGHV1-18*04  277  .....T..............----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  78.3% (18/23)    IGHD2-2*02   7    -----------------------------.......AG..CC..C.......--------------------------------------  29
J  94.0% (47/50)    IGHJ3*02     1    -----------------------------------------------------------...T..T........C...............  31

                                                         
                                       M  V  T  V  S  S  
                    Query_9411   362  ATGGTCACCGTCTCTTCAG  380
J  94.0% (47/50)    IGHJ3*02     32   ...................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_172389

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTATTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  N  H  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9412   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTAATCACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (222/245)  IGHV4-59*01  49   .......................................AG..G.T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  S  H  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  T  A  D  K  S  K  N 
                    Query_9412   91   TGGATTGCCTATATCTCTCACAGTGGGGGCACCAATTACAACCGCTCCCTCAAGAGTCGAGTCACCATAACAGCGGACAAGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  .......GG.......A.T........A.......C.......C.........................T...TA....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_9412   181  CAGTTTTCCCTGAAGGTGAGATCTGTGACCGCCGCGGACACGGCCGTATATTATTGTGCCAGAGAGGCCTACTCTTATTACGGTATGGAC  270
V  90.6% (222/245)  IGHV4-59*01  229  .....C.........C....C...........T..............G.....C.....G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  91.4% (53/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC..C............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_9412   271  GTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  306
J  91.4% (53/58)    IGHJ6*02     27   ...........A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_205602

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	239	265	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	28	28	0	0	100
CDR1-IMGT	29	52	24	17	7	0	70.8
FR2-IMGT	53	103	51	45	6	0	88.2
CDR2-IMGT	104	124	21	18	3	0	85.7
FR3-IMGT	125	238	114	108	6	0	94.7
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E
                    Query_9413   1    GACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGA  90
V  91.0% (223/245)  IGHV4-59*01  48   ..............................T..........GTAG..A..A......C............C.....GG............  137
                                        T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E

                                      ------------><-----CDR2-IMGT-----><----------------------------------------------------FR3
                                        W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N
                    Query_9413   91   GTGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAA  180
V  91.0% (223/245)  IGHV4-59*01  138  ....A....G...A.....T..........C.....C.....................................T...............  227
                                        W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N

                                      -IMGT----------------------------------------------------><--------CDR3-IMGT-------->     
                                        Q  L  S  L  K  L  T  S  V  T  A  A  D  A  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G
                    Query_9413   181  CCAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACGCGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGG  270
V  91.0% (223/245)  IGHV4-59*01  228  ....T...............G...................A............A...........-------------------------  292
                                        Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                           
D  100.0% (7/7)     IGHD5-18*01  10   -----------------------------------------------------------------.......------------------  16
J  97.6% (41/42)    IGHJ4*02     7    -----------------------------------------------------------------------------.....T.......  19

                                                                   
                                        Q  G  T  L  V  T  V  S  S  
                    Query_9413   271  CCAGGGAACCCTGGTCACCGTCTCCTCAG  299
J  97.6% (41/42)    IGHJ4*02     20   .............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_306244

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           361     4e-102
IGHD2-2*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCACGG	TGTAGTAGTACCAGCTGC	CCTCCT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCACGGTGTAGTAGTACCAGCTGCCCTCCTTATGGACGTC	AKDHGVVVPAALLMDV	237	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	24	0	0	100
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	24	0	0	100
FR3-IMGT	123	236	114	114	0	0	100
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	233	232	1	0	99.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  G  V  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 
                    Query_9414   12   TGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCGTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATA  101
V  99.6% (232/233)  IGHV3-30*18  64   ....................................A.....................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_9414   102  TCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTG  191
V  99.6% (232/233)  IGHV3-30*18  154  ..........................................................................................  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  H  G  V  V  V  P  A  A  L  L  M  D 
                    Query_9414   192  CAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATCACGGTGTAGTAGTACCAGCTGCCCTCCTTATGGAC  281
V  99.6% (232/233)  IGHV3-30*18  244  .....................................................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (18/18)   IGHD2-2*01   8    -----------------------------------------------------------..................-------------  25
J  100.0% (43/43)   IGHJ6*02     20   -----------------------------------------------------------------------------------.......  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9414   282  GTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  100.0% (43/43)   IGHJ6*02     27   ....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_175043

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD3-10*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCGGGCGA	TTCGGGGAGCTAT	CCGGACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCGGGCGATTCGGGGAGCTATCCGGACATTTTGACTAC	ATGRFGELSGHFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	228	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  I  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9415   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTACCTTTAACATCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (228/246)  IGHV3-23*01  47   ..................................C.......G..G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  A  S  G  D  S  T  Y  Y  G  D  S  V  K  G  R  F  I  I  S  R  D  N  S  
                    Query_9415   91   AGTGGGTCTCGGGTATTAGTGCCAGTGGTGATAGCACATACTACGGGGACTCCGTGAAGGGCCGGTTCATCATCTCCAGAGACAATTCCA  180
V  92.7% (228/246)  IGHV3-23*01  137  ..........A.C........GT.......G..............CA......................C....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  I  Y  S  C  A  T  G  R  F  G  E  L  S  
                    Query_9415   181  AGAACACTCTGTATCTGCAAATGAGTAGCCTGAGAGCCGAGGACACGGCCATATATTCATGTGCGACCGGGCGATTCGGGGAGCTATCCG  270
V  92.7% (228/246)  IGHV3-23*01  227  .......G................AC........................G......AC.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.3% (12/13)    IGHD3-10*01  13   --------------------------------------------------------------------------.........T...---  25

                                      ------------->                                  
                                      G  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9415   271  GACATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (43/43)   IGHJ4*02     6    -----...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_295328

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           431     4e-123
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ACCCTCGG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTCGGTGCTCTTGATATC	ARTLGALDI	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	282	6	0	97.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_9416   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACCAGCTAT  91
V  97.9% (282/288)  IGHV1-18*01  7    .............................................................................C............  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_9416   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAATTATGCACAG  181
V  97.9% (282/288)  IGHV1-18*01  97   ...................................G.........................C..................C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_9416   182  AAGTTCCAGGGCAGAGTCACCATGACCACGGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  97.9% (282/288)  IGHV1-18*01  187  ...C.........................A............................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------CDR3-IMGT-------->                                  
                                       V  Y  Y  C  A  R  T  L  G  A  L  D  I  W  G  Q  G  A  M  V  T  V  S  S  
                    Query_9416   272  GTGTATTACTGTGCGAGAACCCTCGGTGCTCTTGATATCTGGGGCCAAGGGGCAATGGTCACCGTCTCTTCAG  344
V  97.9% (282/288)  IGHV1-18*01  277  ..................-------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                        
J  95.7% (45/47)    IGHJ3*02     4    --------------------------....T....................A.....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_295326

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           369     2e-104
IGHD6-6*01                                                                                            23.8    0.011 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAT	GAGTTTAGCAGCTCG	GCCGAAAACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGTAGAGATATGAGTTTAGCAGCTCGGCCGAAAACTTTTGACTAC	SRDMSLAARPKTFDY	249	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	246	10	0	96.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9417   1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.1% (246/256)  IGHV3-49*04  47   ..................................................G......G................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  R  S  Y  D  G  A  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_9417   91   AGTGGGTAGGTTTCATTAGAAGCAGATCTTATGATGGGGCAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  96.1% (246/256)  IGHV3-49*04  137  ........................A.G......G....A...................................................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------------CDR3
                                      D  S  K  R  I  A  Y  L  Q  M  N  S  L  K  I  E  D  T  A  V  Y  Y  C  S  R  D  M  S  L  A  
                    Query_9417   181  ATTCCAAGCGCATCGCCTATCTGCAAATGAACAGCCTGAAAATCGAGGACACAGCCGTGTATTACTGTAGTAGAGATATGAGTTTAGCAG  270
V  96.1% (246/256)  IGHV3-49*04  227  .......AA.................................C..........................C......--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  93.3% (14/15)    IGHD6-6*01   1    -------------------------------------------------------------------------------....A......  11

                                      -IMGT----------------->                                  
                                      A  R  P  K  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9417   271  CTCGGCCGAAAACTTTTGACTACTGGGGCCAGGGAACCTTGGTCACCGTCTCCTCAG  327
D  93.3% (14/15)    IGHD6-6*01   12   ....-----------------------------------------------------  15
J  97.7% (42/43)    IGHJ4*02     6    --------------........................C..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_205604

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           338     5e-95
IGHD3-3*01                                                                                            35.3    4e-06
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGTCGTC	ATTACGATTTTTGGGGTGGTT	TTGGCGCCCCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGTCGTCATTACGATTTTTGGGGTGGTTTTGGCGCCCCGTTCTACTTTGACGTC	ARGRHYDFWGGFGAPFYFDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	229	13	0	94.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  H  F  W  C  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9418   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTCACTTCTGGTGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.6% (229/242)  IGHV4-59*08  49   .............................................T...A....A...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  D  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  T  T 
                    Query_9418   91   TGGATTGGGTATATCGACTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCACGACC  180
V  94.6% (229/242)  IGHV4-59*08  139  ...............T.T...............A..................................A................A..A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       H  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  H  Y  D  F  W  G  G 
                    Query_9418   181  CACTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTTTATTACTGTGCGAGGGGTCGTCATTACGATTTTTGGGGTGGT  270
V  94.6% (229/242)  IGHV4-59*08  229  ..G...........G....G...........................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.2% (20/21)    IGHD3-3*01   3    ----------------------------------------------------------------------..............A.....  22

                                      GT------------------------>                                  
                                       F  G  A  P  F  Y  F  D  V  W  G  Q  G  A  L  V  T  S  S  S  
                    Query_9418   271  TTTGGCGCCCCGTTCTACTTTGACGTCTGGGGCCAGGGAGCCCTGGTCACCTCCTCCTCAG  331
D  95.2% (20/21)    IGHD3-3*01   23   .------------------------------------------------------------  23
J  89.4% (42/47)    IGHJ4*02     2    --------------..........TA.............A...........GT........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_295324

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            442     2e-126
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	287	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_9419   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  98.6% (287/291)  IGHV1-2*04   6    ..................G.............AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_9419   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.6% (287/291)  IGHV1-2*04   96   ..........................................................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_9419   181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  98.6% (287/291)  IGHV1-2*04   186  ..........................................................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W  G  Q
                    Query_9419   271  CGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGGGGCCA  360
V  98.6% (287/291)  IGHV1-2*04   276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------------------....A...........................  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_9419   361  AGGGACCACGGTCACCGTCTCCTCA  385
J  98.2% (56/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_295325

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           350     8e-99
IGHD3-10*01                                                                                           33.4    1e-05
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGGTCACCG	CTATGGTTCGGGGAGTT	GGGG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGGTCACCGCTATGGTTCGGGGAGTTGGGGCTACGGTATGGACGTC	ARSGHRYGSGSWGYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9420   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-33*01  47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  H  D  G  S  N  E  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  E  N  S  
                    Query_9420   91   AGTGGGTGGCAGTTATATGGCATGATGGAAGTAATGAACACTATGCAGACTCCGTGAAGGGTCGATTCACCATCTCCAGAGAGAATTCGA  180
V  95.2% (236/248)  IGHV3-33*01  137  ....................T..............A..T......................C....................C.....C.  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  V  Y  V  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  G  H  R  Y  G  S  
                    Query_9420   181  AGAACACGGTATATGTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGATCGGGTCACCGCTATGGTTCGG  270
V  95.2% (236/248)  IGHV3-33*01  227  ........C.G...C....A................................G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (17/17)   IGHD3-10*01  7    -------------------------------------------------------------------------------...........  17

                                      IMGT--------------------->                                 
                                      G  S  W  G  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9420   271  GGAGTTGGGGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (17/17)   IGHD3-10*01  18   ......-----------------------------------------------------  23
J  100.0% (49/49)   IGHJ6*02     14   ----------.................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_295322

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           343     2e-96
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9421   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (232/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  D  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_9421   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCGACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-59*01  139  ........G..................A.....A.........C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_9421   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  94.7% (232/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_9421   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_295323

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     9e-121
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	283	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  
                    Query_9422   3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCA  92
V  95.9% (283/295)  IGHV5-51*01  2    .................................A...................................G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  
                    Query_9422   93   ACTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACA  182
V  95.9% (283/295)  IGHV5-51*01  92   G...........G...........................C....................C...................C........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  
                    Query_9422   183  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACA  272
V  95.9% (283/295)  IGHV5-51*01  182  ...........C.....................................C...........G......A.....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  
                    Query_9422   273  CCGCCATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  362
V  95.9% (283/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  92.9% (13/14)    IGHD1-26*01  4    ---------------------------------..........C...-------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    --------------------------------------------------.......A................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_9422   363  CGGTCACCGTCTCCTCA  379
J  98.2% (56/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_205606

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           353     9e-100
IGHD1-26*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	AGAGAGAGG	GTGGGGGCTACTAC	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATAAGAGAGAGGGTGGGGGCTACTACAACTACTTTGACTAC	AKDKREGGGYYNYFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	252	10	10	0	0	100
Total	N/A	N/A	252	239	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  D  Y  S  M  H  W  V  R  Q  G  P  G  K  G  L  
                    Query_9423   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACCTTTGAAGATTATAGTATGCACTGGGTCCGTCAAGGTCCGGGGAAGGGTCTGG  90
V  94.8% (239/252)  IGHV3-43*01  47   ...............................A...........T.......CC...................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  I  T  W  D  G  S  S  T  Q  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9423   91   AGTGGGTCTCTCTTATCACTTGGGATGGTAGTAGTACACAGTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCA  180
V  94.8% (239/252)  IGHV3-43*01  137  ................T.G..........G....C...T.C.................................................  226
                                      E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  F  Y  Y  C  A  K  D  K  R  E  G  G  G  
                    Query_9423   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAACTGAGGACACCGCCTTTTATTACTGTGCAAAAGATAAGAGAGAGGGTGGGGGCT  270
V  94.8% (239/252)  IGHV3-43*01  227  .A..................................................G...................------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A  K  D                    
D  92.9% (13/14)    IGHD1-26*01  7    ---------------------------------------------------------------------------------.....A...  15

                                      T------------------>                                  
                                      Y  Y  N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9423   271  ACTACAACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  92.9% (13/14)    IGHD1-26*01  16   .....-------------------------------------------------  20
J  100.0% (48/48)   IGHJ4*02     1    ------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_294059

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            316     2e-88
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGTGA	GAGACTGAGT	GTAGTACCACCTG	GCACGAAACGAGGTG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGAGAGACTGAGTGTAGTACCACCTGGCACGAAACGAGGTGACTGGTTCGACCCC	ASERLSVVPPGTKRGDWFDP	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  L  T  F  S  D  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9424  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACCTTTAGTGACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-7*03  47   ................................T...........AG............................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  L  A  M  I  N  E  D  G  R  A  R  F  H  V  D  S  V  K  G  R  F  I  I  S  R  D  N  A  
                    Query_9424  91   AGTGGTTGGCCATGATAAATGAAGATGGACGTGCGAGATTCCATGTGGACTCTGTGAAGGGCCGATTCATCATTTCCAGAGACAACGCCA  180
V  90.4% (226/250)  IGHV3-7*03  137  .....G......AC.....GC........A...A..A..A.T...........................C...C................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------------CD
                                     K  N  S  L  F  L  Q  M  Y  S  L  R  V  D  D  T  A  V  Y  Y  C  A  S  E  R  L  S  V  V  P  
                    Query_9424  181  AGAACTCGCTCTTTCTGCAAATGTACAGCCTGAGAGTCGACGACACGGCCGTCTATTATTGTGCGAGTGAGAGACTGAGTGTAGTACCAC  270
V  90.4% (226/250)  IGHV3-7*03  227  .......A..G.A..........A............C...G...........G.....C........A..--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD2-2*01  12   --------------------------------------------------------------------------------.........G  21

                                     R3-IMGT------------------------>                                  
                                     P  G  T  K  R  G  D  W  F  D  P  R  G  Q  G  T  L  V  I  V  S  S  
                    Query_9424  271  CTGGCACGAAACGAGGTGACTGGTTCGACCCCAGGGGCCAGGGAACCCTGGTCATCGTCTCTTCAG  336
D  92.3% (12/13)    IGHD2-2*01  22   ...---------------------------------------------------------------  24
J  93.8% (45/48)    IGHJ5*02    4    ------------------..............T.....................C......C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_294058

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           357     1e-100
IGHD2-8*02                                                                                            14.1    8.7   
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCGAG	TATTGTCCTG	ATAGTTACTG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCGAGTATTGTCCTGATAGTTACTGCTACTACTACAACGGTATGGACGTC	ARFEYCPDSYCYYYNGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9425   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-33*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  H  D  G  S  N  R  Y  C  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9425   91   AGTGGGTGGCACTTATATGGCATGATGGAAGTAATAGATATTGCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (238/248)  IGHV3-33*01  137  ...........G........T...............A...C.AT..............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  H  C  A  R  F  E  Y  C  P  D  S  
                    Query_9425   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGCGAGCCGAGGACACGGCTGTGTATCATTGTGCGAGATTCGAGTATTGTCCTGATAGTT  270
V  96.0% (238/248)  IGHV3-33*01  227  ................................A.......................T.C.........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD2-8*02   5    --------------------------------------------------------------------------......A...------  14

                                      -IMGT----------------------->                                
                                      Y  C  Y  Y  Y  N  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_9425   271  ACTGCTACTACTACAACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  331
J  98.2% (56/57)    IGHJ6*02     5    ----..........T..............................................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_294057

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           388     5e-110
IGHD2-8*02                                                                                            18.0    0.70  
IGHJ4*02                                                                                              54.5    2e-11 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTTCCCTCAATTACGTTGAC	ACTGGTGGT	TACGAACTGGAATAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTTCCCTCAATTACGTTGACACTGGTGGTTACGAACTGGAATAT	ARPSLNYVDTGGYELEY	300	350	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	70	4	0	94.6
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	185	33	23	1	9	69.7
FR3-IMGT	186	299	114	105	9	0	92.1
CDR3-IMGT (germline)	300	305	6	6	0	0	100
Total	N/A	N/A	302	277	16	9	91.7


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  Q  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_9426   4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCGGGGCAGTCTCTGAAGATCTCCTGTAAGGCCTCTGGATACAGCTTTACCA  93
V  91.7% (277/302)  IGHV5-51*03  2    .................................A..........G........................GT...................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-----------CDR2-IMGT----------
                                      N  F  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  Y  G  D  S  D  
                    Query_9426   94   ACTTCTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTATGGTGACTCTGACA  183
V  91.7% (277/302)  IGHV5-51*03  92   G..A...............................................................---------............T.  172
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P           G  D  S  D  

                                      -><----------------------------------------------------FR3-IMGT---------------------------
                                      T  R  I  S  P  S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  N  T  A  Y  L  E  W  S  S  L  K  
                    Query_9426   184  CCAGAATCAGTCCGTCCTTCCAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCAATACCGCCTACCTGGAGTGGAGCAGCCTGAAGG  273
V  91.7% (277/302)  IGHV5-51*03  173  .....TA...C..........................C...................GC............C..................  262
                                      T  R  Y  S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  

                                      -------------------------><--------------------CDR3-IMGT-------------------->             
                                      A  S  D  A  A  I  Y  Y  C  A  R  P  S  L  N  Y  V  D  T  G  G  Y  E  L  E  Y  W  G  Q  G  
                    Query_9426   274  CCTCGGACGCCGCCATATATTACTGTGCGAGACCTTCCCTCAATTACGTTGACACTGGTGGTTACGAACTGGAATATTGGGGCCAGGGAA  363
V  91.7% (277/302)  IGHV5-51*03  263  ........A.......G...............----------------------------------------------------------  294
                                      A  S  D  T  A  M  Y  Y  C  A  R                                                           
D  100.0% (9/9)     IGHD2-8*02   11   -----------------------------------------------------.........----------------------------  19
J  94.1% (32/34)    IGHJ4*02     15   -----------------------------------------------------------------------------.............  27

                                                           
                                      T  R  V  T  V  S  S  
                    Query_9426   364  CCCGTGTCACCGTCTCCTCAG  384
J  94.1% (32/34)    IGHJ4*02     28   ...TG................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_294055

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            353     9e-100
IGHD5-18*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAA	TCCTCGGGA	GATACACCTATGG	CCGGATCAAC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAATCCTCGGGAGATACACCTATGGCCGGATCAACCTTTGACCAC	AKSSGDTPMAGSTFDH	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  F  A  M  Y  W  V  R  Q  G  P  G  K  G  L  
                    Query_9427   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTTTGCCATGTATTGGGTCCGGCAAGGTCCAGGGAAGGGCCTGG  90
V  95.6% (237/248)  IGHV3-9*01   47   ................................................A.......C.C.............C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  D  I  S  W  N  S  G  F  I  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9427   91   AGTGGGTCTCAGATATTAGTTGGAATAGTGGTTTCATAGACTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (237/248)  IGHV3-9*01   137  ............G...................AG.....G..................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  K  S  S  G  D  T  P  M  
                    Query_9427   181  GGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGTTGAGGACACGGCCTTATATTACTGTGCAAAATCCTCGGGAGATACACCTATGG  270
V  95.6% (237/248)  IGHV3-9*01   227  A...................................C...............G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  92.3% (12/13)    IGHD5-18*01  4    -----------------------------------------------------------------------------......G......  16

                                      T------------------>                                  
                                      A  G  S  T  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9427   271  CCGGATCAACCTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.7% (43/44)    IGHJ4*02     5    ----------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_294054

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD3-9*01                                                                                            25.7    0.003
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTTACCTGGAAT	TTACGATTCTGTGACTGGTTAT	CAAGTGAATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTACCTGGAATTTACGATTCTGTGACTGGTTATCAAGTGAATGCCTAC	ARLPGIYDSVTGYQVNAY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	226	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  T  F  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9428   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATACTTTCTACTGGACCTGGATCCGTCAGCCCCCAGGAAAGGGACTGGAG  90
V  93.4% (226/242)  IGHV4-59*01  49   ........................................G..G..A........G.........G...........G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  H  S  G  R  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  L  N 
                    Query_9428   91   TGGATTGGGTATATCTATCATAGTGGGAGAACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACATCTTTGAAC  180
V  93.4% (226/242)  IGHV4-59*01  139  ..................T.C........C..................................................G..CAA....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  P  G  I  Y  D  S  V  T 
                    Query_9428   181  CAGTTCTCCCTGAGACTGAGCTCCGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTTACCTGGAATTTACGATTCTGTGACT  270
V  93.4% (226/242)  IGHV4-59*01  229  .............AG........T......................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  86.4% (19/22)    IGHD3-9*01   4    --------------------------------------------------------------------------.......AT.T.....  19

                                      -------------------->                                 
                                       G  Y  Q  V  N  A  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_9428   271  GGTTATCAAGTGAATGCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  324
D  86.4% (19/22)    IGHD3-9*01   20   ......------------------------------------------------  25
J  100.0% (37/37)   IGHJ4*02     11   -----------------.....................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_294053

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           355     3e-100
IGHD3-10*01                                                                                           14.1    9.2   
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCCGAATAGGGGGCTCGTGCGACCTACGG	TCGGGGA	CCATTTCGGTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCCGAATAGGGGGCTCGTGCGACCTACGGTCGGGGACCATTTCGGTCACTACTACTACGGTATGGACGAC	AAPNRGLVRPTVGDHFGHYYYGMDD	243	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  T  W  V  R  R  G  P  G  K  G  L  
                    Query_9429   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACCTTTAGCAGCTATGCCATGACCTGGGTCCGCCGGGGTCCAGGGAAGGGGCTGG  90
V  96.3% (236/245)  IGHV3-23*01  47   ...............................A.........................G...........A..C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9429   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTAGTAACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.3% (236/245)  IGHV3-23*01  137  .............................G...G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  A  P  N  R  G  L  V  R  
                    Query_9429   181  AGAACACCCTGTATCTGCAAATGAACAGCCTGAGAGCAGACGACACGGCCGTATATTACTGTGCGGCCCCGAATAGGGGGCTCGTGCGAC  270
V  96.3% (236/245)  IGHV3-23*01  227  .......G.............................C..G........................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      -----CDR3-IMGT-------------------------------->                                 
                                      P  T  V  G  D  H  F  G  H  Y  Y  Y  G  M  D  D  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9429   271  CTACGGTCGGGGACCATTTCGGTCACTACTACTACGGTATGGACGACTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  350
D  100.0% (7/7)     IGHD3-10*01  14   ------.......-------------------------------------------------------------------  20
J  98.2% (55/56)    IGHJ6*02     7    ------------------------.....................T..................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_294052

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           372     2e-105
IGHD1-20*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGAATACAA	GTATAAC	GGAATAGGG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGAATACAAGTATAACGGAATAGGGATGGACGTC	TRSEYKYNGIGMDV	286	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	69	5	0	93.2
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	171	21	19	2	0	90.5
FR3-IMGT	172	285	114	102	12	0	89.5
CDR3-IMGT (germline)	286	291	6	5	1	0	83.3
Total	N/A	N/A	290	264	26	0	91


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  E  S  
                    Query_9430   2    AGATGCAGCTGGTGCAGTCTGGAGGAGGCCTGATCCAGCCGGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCGGGGTTCACCGAAAGTA  91
V  91.0% (264/290)  IGHV3-53*01  2    ..G...........G..............T..........T................................T..........TC....  91
                                         V  Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  

                                      T------><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------
                                      R  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  T  T  H  Y  A  
                    Query_9430   92   GGAATTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGGAGTGGGTCTCAGTTATTTATAGTGGTGGTACCACACACTACGCAG  181
V  91.0% (264/290)  IGHV3-53*01  92   .C..C.......G...........................G..........................C.......G....T.........  181
                                      S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  M  T  T  L  F  L  Q  M  N  S  L  R  A  E  D  S  
                    Query_9430   182  ATTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCATGACCACATTGTTTCTTCAAATGAACAGTTTGAGAGCCGAGGACTCGG  271
V  91.0% (264/290)  IGHV3-53*01  182  .C..C...........A.........................A..A...GC...A...............CC..............A...  271
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                 
                                      A  V  Y  Y  C  T  R  S  E  Y  K  Y  N  G  I  G  M  D  V  W  G  Q  G  T  T  V  P  V  S  S 
                    Query_9430   272  CCGTGTATTACTGTACGAGATCAGAATACAAGTATAACGGAATAGGGATGGACGTCTGGGGCCAAGGGACCACGGTCCCCGTCTCCTCA  360
V  91.0% (264/290)  IGHV3-53*01  272  ..............G.....---------------------------------------------------------------------  291
                                      A  V  Y  Y  C  A  R                                                                      
D  100.0% (7/7)     IGHD1-20*01  2    -------------------------------.......---------------------------------------------------  8
J  97.6% (41/42)    IGHJ6*02     21   -----------------------------------------------..............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_294051

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            316     2e-88
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGTGA	GAGACTGAGT	GTAGTACCACCTG	GCACGAAACGAGGTG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGAGAGACTGAGTGTAGTACCACCTGGCACGAAACGAGGTGACTGGTTCGACCCC	ASERLSVVPPGTKRGDWFDP	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  L  T  F  S  D  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9431  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACCTTTAGTGACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-7*03  47   ................................T...........AG............................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  L  A  M  I  N  E  D  G  R  A  R  F  H  V  D  S  V  K  G  R  F  I  I  S  R  D  N  A  
                    Query_9431  91   AGTGGTTGGCCATGATAAATGAAGATGGACGTGCGAGATTCCATGTGGACTCTGTGAAGGGCCGATTCATCATTTCCAGAGACAACGCCA  180
V  90.4% (226/250)  IGHV3-7*03  137  .....G......AC.....GC........A...A..A..A.T...........................C...C................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------------CD
                                     K  N  S  L  F  L  Q  M  Y  S  L  R  V  D  D  T  A  V  Y  Y  C  A  S  E  R  L  S  V  V  P  
                    Query_9431  181  AGAACTCGCTCTTTCTGCAAATGTACAGCCTGAGAGTCGACGACACGGCCGTCTATTATTGTGCGAGTGAGAGACTGAGTGTAGTACCAC  270
V  90.4% (226/250)  IGHV3-7*03  227  .......A..G.A..........A............C...G...........G.....C........A..--------------------  296
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD2-2*01  12   --------------------------------------------------------------------------------.........G  21

                                     R3-IMGT------------------------>                                  
                                     P  G  T  K  R  G  D  W  F  D  P  R  G  Q  G  T  L  V  I  V  S  S  
                    Query_9431  271  CTGGCACGAAACGAGGTGACTGGTTCGACCCCAGGGGCCAGGGAACCCTGGTCATCGTCTCTTCAG  336
D  92.3% (12/13)    IGHD2-2*01  22   ...---------------------------------------------------------------  24
J  93.8% (45/48)    IGHJ5*02    4    ------------------..............T.....................C......C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_294050

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           335     4e-94
IGHD3-10*01                                                                                           21.8    0.041
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGGTTCGAGCAGTTATT	CCTTCGCGCG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTTCGAGCAGTTATTCCTTCGCGCGCTACGGTATGGACGTC	ARDGSSSYSFARYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9432   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACTTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-48*03  47   ....................G................C....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  G  G  G  R  T  I  F  Y  A  D  S  V  K  G  R  F  T  L  S  R  D  N  T  
                    Query_9432   91   AGTGGGTTTCATACATTAGTGGCGGTGGAAGAACCATTTTCTACGCAGACTCTGTGAAGGGCCGATTCACCTTGTCCAGAGACAACACCA  180
V  92.8% (232/250)  IGHV3-48*03  137  ....................A.TA....T..T.....A.A...............................A.C............G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  T  A  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  S  S  Y  S  
                    Query_9432   181  AGACCGCTCTGCATCTACAAATGAACAGCCTGAGAGCCGAAGACACGGCTGTTTATTACTGTGCGAGAGATGGTTCGAGCAGTTATTCCT  270
V  92.8% (232/250)  IGHV3-48*03  227  ...A.T.A...T....G.......................G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.2% (15/17)    IGHD3-10*01  10   ----------------------------------------------------------------------.......G.G.......---  26

                                      GT-------------------->                                 
                                      F  A  R  Y  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_9432   271  TCGCGCGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  326
J  98.0% (48/49)    IGHJ6*02     14   -------......................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_205608

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD5-18*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGT	TGGATACAACTATGGTTAC	CCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTTGGATACAACTATGGTTACCCTCACTTTGACTAC	ARGVGYNYGYPHFDY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	233	10	0	95.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_9433   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  95.9% (233/243)  IGHV4-59*01  50   .....TCC...A..............................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  F  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_9433   94   GGATTGGCTTTATCTATTACACTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGTGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  95.9% (233/243)  IGHV4-59*01  140  .......G.A...........G......C.............................A...............................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  Y  N  Y  G  Y  P  
                    Query_9433   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGGTTGGATACAACTATGGTTACCCTC  273
V  95.9% (233/243)  IGHV4-59*01  230  ...............................T...............................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  94.7% (18/19)    IGHD5-18*01  2    -------------------------------------------------------------------........G..........----  20

                                      ---------->                                  
                                      H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9433   274  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (45/45)   IGHJ4*02     4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_265339

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           346     2e-97
IGHD3-9*01                                                                                            14.1    8.5  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGTGCTCCCGTATTGCAGTCTGACT	ACTTGTTATT	N/A	TGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGTGCTCCCGTATTGCAGTCTGACTACTTGTTATTTGGAAGTC	ASVLPYCSLTTCYLEV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         P  L  R  L  S  C  A  A  S  G  F  I  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9434   1    GGCCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCATCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.7% (234/247)  IGHV3-33*01  47   ..T.................................C.....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  T  K  R  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9434   91   AGTGGGTGGCAGTTATATGGTATGATGGAACTAAAAGATATTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.7% (234/247)  IGHV3-33*01  137  ..............................G...T.A...C....C............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  T  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  V  L  P  Y  C  S  L  
                    Query_9434   181  GGAACACGCTGTATCTAGAAATGAATAGCCTGAGAGCCGAGGACACGGCTGTCTACTACTGTGCGAGCGTGCTCCCGTATTGCAGTCTGA  270
V  94.7% (234/247)  IGHV3-33*01  227  A...............GC.......C..........................G..T...........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      T------------------>                                 
                                      T  T  C  Y  L  E  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9434   271  CTACTTGTTATTTGGAAGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
D  90.0% (9/10)     IGHD3-9*01   17   --...G......-----------------------------------------  26
J  97.6% (40/41)    IGHJ6*02     22   ------------....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_184338

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           355     3e-100
IGHD6-6*01                                                                                            19.9    0.15  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCACTGGCGC	ATAGCAGCCCGTC	GGGAGGGGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCACTGGCGCATAGCAGCCCGTCGGGAGGGGGGCTTGACCAC	ASLAHSSPSGGGLDH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9435   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.3% (236/245)  IGHV3-30*03  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  V  K  W  Y  A  D  S  L  K  G  R  I  T  I  S  R  D  N  S  
                    Query_9435   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTGTTAAATGGTATGCAGACTCCCTGAAGGGCCGAATCACCATCTCCAGAGACAATTCCA  180
V  96.3% (236/245)  IGHV3-30*03  137  ................................AA.....AC............G...........T........................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  L  A  H  S  S  P  S  
                    Query_9435   181  AGAACACGCTGTATCTAGAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTCTATTACTGTGCGTCACTGGCGCATAGCAGCCCGTCGG  270
V  96.3% (236/245)  IGHV3-30*03  227  ................GC..................................G............-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.3% (12/13)    IGHD6-6*01   5    ---------------------------------------------------------------------------........T....--  17

                                      ---------------->                                  
                                      G  G  G  L  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9435   271  GAGGGGGGCTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.6% (41/42)    IGHJ4*02     7    ---------.....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_205609

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           360     1e-101
IGHD1-26*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTACAAAC	TGGGAGCCACT	CGAGGTCCGTG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATTACAAACTGGGAGCCACTCGAGGTCCGTGTGACTCC	AKDYKLGATRGPCDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9436   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-30*18  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  N  N  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9436   91   AGTGGGTGGCAGTTATTTCATATGATGGAAATAATAAATACTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCG  180
V  96.0% (240/250)  IGHV3-30*18  137  ................A.............G..............C...........................................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  S  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  Y  K  L  G  A  T  
                    Query_9436   181  AGAGTACCCTGTATCTGCAAATGAACAGCCTGAGAGCTGACGACACGGCTGTGTATTACTGTGCGAAAGATTACAAACTGGGAGCCACTC  270
V  96.0% (240/250)  IGHV3-30*18  227  ...AC..G................................G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.9% (10/11)    IGHD1-26*01  8    ------------------------------------------------------------------------------.......T...-  18

                                      ---------------->                                  
                                      R  G  P  C  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9436   271  GAGGTCCGTGTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.6% (40/41)    IGHJ4*02     8    ----------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_184336

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           371     6e-105
IGHD3-9*01                                                                                            14.1    8.5   
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-9*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCTACG	TTTTGGCTGG	GAGAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTACGTTTTGGCTGGGAGAATGATGCACTTGATATC	ARHLRFGWENDALDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9437   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  97.2% (244/251)  IGHV4-39*01  49   .........................................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9437   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACGACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCCGTTGACACGTCC  180
V  97.2% (244/251)  IGHV4-39*01  139  ..........................................T...............................A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  R  F  G  W  E 
                    Query_9437   181  AAGAATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGACATCTACGTTTTGGCTGGGAG  270
V  97.2% (244/251)  IGHV4-39*01  229  .....C.............A.......................................C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-9*01   12   -----------------------------------------------------------------------------.....A....---  21

                                      ----------------->                                  
                                       N  D  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9437   271  AATGATGCACTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  96.0% (48/50)    IGHJ3*02     1    --......TT..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_184337

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         322     2e-90
IGHD2-2*01                                                                                            35.3    4e-06
IGHJ6*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGGGGAG	TATTGTAGTAGTACCAACTGC	ATG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGGGGAGTATTGTAGTAGTACCAACTGCATGTACGGTCTGGACGTC	ARGGEYCSSTNCMYGLDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  D  I  Y  S  W  N  W  I  R  Q  P  P  G  M  G 
                    Query_9438     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCTCCAGTGATATTTACTCCTGGAACTGGATCCGGCAGCCACCAGGGATGGGC  90
V  91.5% (227/248)  IGHV4-30-2*01  49   .......................................AG.....G.GG...........G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  V  G  H  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  R  S 
                    Query_9438     91   CTGGAGTGGGTTGGCCACATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCCAGAGTCGAGTCACCATCTCAGTTGACAGGTCC  180
V  91.5% (227/248)  IGHV4-30-2*01  139  .........A....GT..................G......................A................A.....A.........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  K  H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  E  Y  C  S  S 
                    Query_9438     181  AAGAAACACTTCTCGTTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGGGGGGGGGAGTATTGTAGTAGT  270
V  91.5% (227/248)  IGHV4-30-2*01  229  .....C..G.....CC...A.....G...........................G..............----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  95.2% (20/21)    IGHD2-2*01     5    ------------------------------------------------------------------------------............  16

                                        -IMGT--------------------->                                 
                                         T  N  C  M  Y  G  L  D  V  W  G  Q  E   T  R  S  P  S  P   
                    Query_9438     271  ACCAACTGCATGTACGGTCTGGACGTCTGGGGCCAAGAGA-CACGGTCACCGTCTCCTCA  329
D  95.2% (20/21)    IGHD2-2*01     17   ....G....---------------------------------------------------  25
J  93.8% (45/48)    IGHJ6*02       15   ------------......A..................G..C...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_184334

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           397     8e-113
IGHD2-21*02                                                                                           16.1    2.5   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TTTG	GGTGATGACTG	GGATCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTTTGGGTGATGACTGGGATCAATACTACTTTGACTAC	ASLGDDWDQYYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	271	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  T  G  E  S  L  K  I  S  C  R  C  S  G  Y  R  F  T  N  Y
                    Query_9439   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGACCGGGGAGTCTCTGAAGATCTCCTGTAGGTGTTCTGGATACAGGTTTACCAATTA  90
V  94.1% (271/288)  IGHV5-51*01  6    ..................................C...........................A.G.............C.......GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  M  G  M  M  N  P  G  D  S  D  T  R  Y  S  P
                    Query_9439   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACATGGGAATGATGAATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  94.1% (271/288)  IGHV5-51*01  96   ........G...................................GG.....G..C..CT...............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  G  Q  V  T  I  S  A  D  E  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_9439   181  GCCCTTCCAAGGCCAGGTCACCATCTCAGCCGACGAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  94.1% (271/288)  IGHV5-51*01  186  .T................................A..........C...........................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  S  L  G  D  D  W  D  Q  Y  Y  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_9439   271  CATGTATTACTGTGCGAGTTTGGGTGATGACTGGGATCAATACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  359
V  94.1% (271/288)  IGHV5-51*01  276  ..................-----------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                          
D  90.9% (10/11)    IGHD2-21*02  11   ----------------------....G......--------------------------------------------------------  21
J  97.9% (47/48)    IGHJ4*02     1    -----------------------------------------...................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_184335

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            324     8e-91
IGHD1-26*01                                                                                           18.0    0.61 
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAACAGTTTGTTGGCACCTG	AGTGGGAGC	CTGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACAGTTTGTTGGCACCTGAGTGGGAGCCTGATGATGCTTTTGATATC	ARVNSLLAPEWEPDDAFDI	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	18	3	0	85.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  A  S  I  S  S  R  S  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_9440   1    GGTCCCTGAGACTCTCCTGTGCTGTCTCTGGTGCCTCCATCAGCAGCAGAAGCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  91.6% (228/249)  IGHV4-4*02   47   ..A.....TCC...A....C.............G............T..T.A......................................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  G  G  N  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  K  S  
                    Query_9440   91   TGGAGTGGATTGGGGAGATCTATCATGGTGGGAATACCAACTACAACCCGTCCCTCAAGAGTCGACTTACTATATCAGTAGACAAGTCCA  180
V  91.6% (228/249)  IGHV4-4*02   137  ................A.........A......GC..............................G.C..C...................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  Q  F  S  L  Q  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  S  L  L  A  P  
                    Query_9440   181  AGAACCAATTCTCCCTGCAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGAGAGTTAACAGTTTGTTGGCACCTG  270
V  91.6% (228/249)  IGHV4-4*02   227  .......G.........A.......C..........................G................---------------------  295
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       

                                      -IMGT----------------------->                                  
                                      E  W  E  P  D  D  A  F  D  I  W  G  Q  G  T  L  A  I  V  S  S  
                    Query_9440   271  AGTGGGAGCCTGATGATGCTTTTGATATCTGGGGCCAAGGGACATTGGCCATCGTCTCTTCAG  333
D  100.0% (9/9)     IGHD1-26*01  6    .........------------------------------------------------------  14
J  94.0% (47/50)    IGHJ3*02     1    -------------...............................A...T..C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_265336

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           294     6e-82
IGHD6-19*01                                                                                           12.2    31   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GGCTGG	AGGCAGCGC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCTGGAGGCAGCGCCTATTATTATGGTTTGGACGTC	ARAGGSAYYYGLDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	215	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  R  S  G  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_9441   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGAAGTGGCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  88.8% (215/242)  IGHV4-59*01  49   ..................A......................T...TA......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  Y  N  G  G  S  T  D  Y  N  P  S  L  R  S  R  V  T  I  S  A  D  T  S  K  K 
                    Query_9441   91   TGGATTGGATACTTCTATAATGGGGGGAGCACCGATTACAATCCCTCCCTCAGGAGTCGAGTCACCATCTCAGCAGACACGTCCAAGAAG  180
V  88.8% (215/242)  IGHV4-59*01  139  ........G..TA.....T.CA.T.........A.C.....C..........A...............A....T...............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  L  S  L  T  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  G  S  A  Y  Y  Y  G 
                    Query_9441   181  CAACTCTCCCTGACGGTGACCTCTGTGACCGCCGCGGACACGGCCGTTTACTACTGTGCGAGGGCTGGAGGCAGCGCCTATTATTATGGT  270
V  88.8% (215/242)  IGHV4-59*01  229  ..GT.........A.C...G............T..............G..T...........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD6-19*01  13   --------------------------------------------------------------......----------------------  18
J  90.9% (50/55)    IGHJ6*02     8    -----------------------------------------------------------------------------...C..C..C...  20

                                      -------->                                 
                                       L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9441   271  TTGGACGTCTGGGGCCAAGGGACCACGGTCACTGTCTCCTCA  312
J  90.9% (50/55)    IGHJ6*02     21   A...............................C.........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_265337

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     4e-95
IGHD3-10*02                                                                                           14.1    8.2  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTGGGTGGAATTA	ACTATGT	CTAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTGGGTGGAATTAACTATGTCTACGACTAC	AKDVGGINYVYDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  A  Y  A  M  S  W  V  R  Q  A  P  G  R  G  P  
                    Query_9442   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTTAACGCCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAGGGGGCCGG  90
V  93.2% (233/250)  IGHV3-23*01  47   ...............................A..........G.AG............C......................A.....T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  T  G  G  R  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  S  D  N  S  
                    Query_9442   91   AGTGGGTCTCAACTATCAGTGGTACTGGTGGTAGAACATACTACGCAGACTCCGTGAAAGGCCGGTTCACCATCTCCAGCGACAACTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  ...........G....T.......G.........C.......................G....................A.....T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  V  G  G  I  N  Y  
                    Query_9442   181  AGAACACACTGTTTCTGCAAATGAACAGCCTCAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATGTGGGTGGAATTAACTATG  270
V  93.2% (233/250)  IGHV3-23*01  227  .......G....A..................G......................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-10*02  6    ------------------------------------------------------------------------------------......  11

                                      ---------->                                  
                                      V  Y  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_9442   271  TCTACGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  315
D  100.0% (7/7)     IGHD3-10*02  12   .--------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -----..................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_184330

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           325     3e-91
IGHD2-2*02                                                                                            14.1    8.3  
IGHJ3*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GGGGGGCCCTAGAAG	GCTATAC	AGAG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGGGGGGGCCCTAGAAGGCTATACAGAGGCTTTTGATATC	AGGGALEGYTEAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  N  Y  Y  W  S  W  M  R  Q  P  P  G  K  G  L  E 
                    Query_9443   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAATTACTACTGGAGCTGGATGCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.6% (226/244)  IGHV4-59*01  49   ........................................G..G..................C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  C  F  Y  Y  G  G  N  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  G  T  S  K  N 
                    Query_9443   91   TGGATTGGGTGTTTCTATTACGGTGGAAACACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTGGGCACGTCCAAGAAC  180
V  92.6% (226/244)  IGHV4-59*01  139  ..........A.A........A....G.G....A..................................A.....A.A.............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  N  S  L  T  S  A  D  T  A  V  Y  Y  C  A  G  G  G  A  L  E  G  Y  T  E 
                    Query_9443   181  CAGTTCTCCCTGAAGCTGAACTCTCTGACGTCTGCGGACACGGCCGTATATTACTGTGCGGGAGGGGGGGCCCTAGAAGGCTATACAGAG  270
V  92.6% (226/244)  IGHV4-59*01  229  ...................G....G....CG................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD2-2*02   24   -------------------------------------------------------------------------------.......----  30

                                      ----------->                                  
                                       A  F  D  I  W  G  Q  G  T  A  V  T  V  S  S  
                    Query_9443   271  GCTTTTGATATCTGGGGCCAAGGGACAGCGGTCACCGTCTCTTCAG  316
J  95.7% (44/46)    IGHJ3*02     5    ...........................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_265335

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD1-26*01                                                                                           10.3    116  
IGHJ2*01                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGAG	GTGGG	CTT	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGGTGGGCTTTGGTACTTCGATCTC	ARDRGGLWYFDL	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  D  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_9444   4    CCCTGAGACTCTCCTGCACTGTCTCTGATGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.4% (228/244)  IGHV4-59*01  50   .....TCC...A...............G..............G...............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  N  I  Y  H  S  G  S  T  M  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  P  K  N  
                    Query_9444   94   GGATTGCGAATATCTATCACAGTGGCAGCACAATGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGCCCAAGAATC  183
V  93.4% (228/244)  IGHV4-59*01  140  ......G.T........T.......G.....C.AC.............................................T.......C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  G  G  L  W  Y  F  D  
                    Query_9444   184  AGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGAGGTGGGCTTTGGTACTTCGATC  273
V  93.4% (228/244)  IGHV4-59*01  230  ..................G.............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (5/5)     IGHD1-26*01  7    ---------------------------------------------------------------------.....----------------  11
J  100.0% (49/49)   IGHJ2*01     5    -----------------------------------------------------------------------------.............  17

                                      ->                                  
                                      L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9444   274  TCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  309
J  100.0% (49/49)   IGHJ2*01     18   ....................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_310328

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           299     3e-83
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              58.4    1e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGGG	AGCAATGGCTGG	GGAAGGTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTAGGGACGCC	ARGHRGSNGWGRYYNYGRDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	22	2	6	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	223	22	6	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  S  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_9445   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGCCCTTCAGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.8% (223/251)  IGHV4-34*01  49   .......................C..T......T.........------....C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  L  D  T  S 
                    Query_9445   91   CTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAATCCGTCCCTCCAGAGTCGAGTCACCATATCACTAGACACGTCC  180
V  88.8% (223/251)  IGHV4-34*01  133  .....G.............T..A....AG.....G............C.........A....................G...........  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  G  S  N  G 
                    Query_9445   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGGGAGCAATGGC  270
V  88.8% (223/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  R  Y  Y  N  Y  G  R  D  A  W  G  Q  G  T  A  F  S  I  S  S 
                    Query_9445   271  TGGGGAAGGTACTATAATTACGGTAGGGACGCCTGGGGCCAAGGGACCGCGTTCTCCATCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  87.5% (42/48)    IGHJ6*02     15   ------------------.......T.....T................A..G..A..G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_281588

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTGTACGAGGCGACTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATGTGTACGAGGCGACTCATCAATATAGTGGCTACATGATTAATGACTAC	GKDVYEATHQYSGYMINDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9446   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAAGTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  E  S  G  A  S  T  N  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9446   91   AATGGGTCTCAGGTATCAGTGAGAGCGGTGCTAGCACAAATCACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-23*01  137  .G..........C...T....GT..T....G.......T.CT................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  I  S  L  T  V  E  D  T  A  V  Y  Y  C  G  K  D  V  Y  E  A  T  H  
                    Query_9446   181  AGAACACACTGTATCTGCAAATGATCAGCCTGACAGTCGAGGACACGGCCGTATATTATTGTGGGAAAGATGTGTACGAGGCGACTCATC  270
V  92.8% (232/250)  IGHV3-23*01  227  .......G................A........G..C.....................C....C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9446   271  AATATAGTGGCTACATGATTAATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_281587

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTCG	TATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCGTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9447   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_9447   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTTCCATATCAGTGGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ..................................G..................................A..........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  K  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  S  Y  G  S  G 
                    Query_9447   181  AAGAACAAGTTCTCCCTGAAGCTGACCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTCGTATGGTTCGGGG  270
V  96.4% (241/250)  IGHV4-31*03  229  ......C..................G............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (21/21)   IGHD3-10*01  8    ------------------------------------------------------------------------------............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9447   271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (21/21)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_310327

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           346     2e-97
IGHD6-13*01                                                                                           12.2    30   
IGHJ3*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	A	TGGTAC	N/A	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGTACATGCTTTTGATATC	ARMVHAFDI	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9448   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (232/243)  IGHV4-59*08  49   ..........................................AG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       C  I  G  Y  I  Y  Y  M  G  S  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_9448   91   TGCATTGGATATATCTATTACATGGGGAGCACCAACTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCATTAGACACATCCAAGAAC  180
V  95.5% (232/243)  IGHV4-59*08  139  ..G.....G.............GT...........................A....................G.......G.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  M  V  H  A  F  D  I  W  G 
                    Query_9448   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTTTATTACTGTGCGAGAATGGTACATGCTTTTGATATCTGGGGC  270
V  95.5% (232/243)  IGHV4-59*08  229  ...................G...........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-13*01  16   ----------------------------------------------------------------......--------------------  21
J  97.9% (47/48)    IGHJ3*02     3    ----------------------------------------------------------------------....................  22

                                                                  
                                       Q  G  T  M  V  T  V  S  S  
                    Query_9448   271  CAGGGGACAATGGTCACCGTCTCTTCAG  298
J  97.9% (47/48)    IGHJ3*02     23   ..A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_310324

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         338     5e-95
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	N/A	TTCGCCACACTTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTTCGCCACACTTCTTACTACTTCTACGCTTTGGACGTC	ARVRHTSYYFYALDV	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  H  P  P  G  K  G 
                    Query_9449     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCATCCCCCCGGGAAGGGC  90
V  93.2% (233/250)  IGHV4-30-4*01  49   ..................A..............................A........................G.....A.........  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  Y  I  G  Y  V  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  V  S  I  L  V  D  T  S 
                    Query_9449     91   CTGGAGTACATTGGGTACGTCTATTACAGTGGGACTACCTACTATAATAAGTCTCTCAAGAGTCGAGTTAGCATATTAGTAGACACGTCC  180
V  93.2% (233/250)  IGHV4-30-4*01  139  .......GG.........A...............GC........C..CCC...C................C.....C.............  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  H  T  S  Y  Y 
                    Query_9449     181  AAGAACCAGTTCTCCCTGAAGCTGAGATCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGTTCGCCACACTTCTTACTAC  270
V  93.2% (233/250)  IGHV4-30-4*01  229  ..........................C...........................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  93.0% (53/57)    IGHJ6*02       6    ------------------------------------------------------------------------------------......  11

                                        ----------------->                                 
                                         F  Y  A  L  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_9449     271  TTCTACGCTTTGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  321
J  93.0% (53/57)    IGHJ6*02       12   .A.....G.A..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_310325

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            307     1e-85
IGHD3-9*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAAGAGCGGTACGCTTTGTT	ACTGTTTATTA	CGAGGGGCCTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAAGAGCGGTACGCTTTGTTACTGTTTATTACGAGGGGCCTCCTGACTAC	ATRAVRFVTVYYEGPPDY	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	220	24	0	90.2


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  N  S  N  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_9450  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGTCCATCAGTAATAGTAACTGGTGGACTTGGATTCGCCAGCCCCCAGGAAAGGGGCTG  90
V  90.2% (220/244)  IGHV4-4*01  49   ................................C........C.G..............G....G.C..............G.........  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  I  D  S  G  S  T  N  Y  N  P  S  I  M  S  R  A  I  I  P  L  D  K  T  K 
                    Query_9450  91   GAGTGGATTGGGGAAATTATTGATAGTGGGAGCACCAACTACAACCCGTCCATCATGAGTCGAGCCATCATCCCACTAGACAAGACCAAG  180
V  90.2% (220/244)  IGHV4-4*01  139  .................CTA.C.............................C...A........T..C...AT..G........T.....  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                      H  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  T  R  A  V  R  F  V  T  V 
                    Query_9450  181  CATCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGACAAGAGCGGTACGCTTTGTTACTGTT  270
V  90.2% (220/244)  IGHV4-4*01  229  A.C..............G....G................................G........--------------------------  292
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  90.9% (10/11)    IGHD3-9*01  17   ------------------------------------------------------------------------------------....G.  22

                                     GT--------------------->                                  
                                      Y  Y  E  G  P  P  D  Y  W  G  Q  G  T  L  V  T  I  S  S  
                    Query_9450  271  TATTACGAGGGGCCTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCATCTCCTCAG  328
D  90.9% (10/11)    IGHD3-9*01  23   .....-----------------------------------------------------  27
J  97.6% (40/41)    IGHJ4*02    8    -----------------...............................G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_281583

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD3-16*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_9451   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (227/249)  IGHV4-61*01  49   .......................C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S 
                    Query_9451   91   CTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  91.2% (227/249)  IGHV4-61*01  139  ....A.........GT............G......CAC..A.........................G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y 
                    Query_9451   181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTAT  270
V  91.2% (227/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------------.....  28

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_9451   271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
D  100.0% (7/7)     IGHD3-16*02  29   ..--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_281582

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD1-1*01                                                                                            12.2    30   
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTT	TACAAC	GGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTTACAACGGGACTACTTTGACTAC	ARVLQRDYFDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  N  S  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9452   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAATAGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ......................................C.G........A...............G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       Y  I  G  F  I  Y  Y  T  G  S  A  Y  Y  S  S  S  L  K  S  R  V  T  I  L  I  D  A  S  K  K 
                    Query_9452   91   TACATTGGATTTATCTATTACACTGGGAGCGCCTACTACAGTTCCTCCCTCAAGAGTCGAGTCACCATATTAATAGACGCGTCCAAAAAG  180
V  90.6% (221/244)  IGHV4-59*01  139  .GG.....G.A...........G.......A..A......ACC...........................C.G.....A.......G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       E  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  L  Q  R  D  Y  F  D  Y 
                    Query_9452   181  GAATTCTCCCTGAAACTGAGCTCAGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTTTTACAACGGGACTACTTTGACTAC  270
V  90.6% (221/244)  IGHV4-59*01  229  C.G...........G........T........................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-1*01   3    -------------------------------------------------------------------......-----------------  8
J  100.0% (48/48)   IGHJ4*02     1    ----------------------------------------------------------------------------..............  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9452   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (48/48)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_281581

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD1-26*01                                                                                           10.3    120  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TGCCCCATATACGCAAAAAACTA	GAGCT	TTTCGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGCCCCATATACGCAAAAAACTAGAGCTTTTCGCCTTGACTAC	ASAPYTQKTRAFRLDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	228	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  F  S  G  D  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9453   1    ACCCTGTCCCTCACCTGCACTTTCTCTGGTGACTCCATCAGTAACTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.2% (228/242)  IGHV4-59*01  49   .....................G.........G...........GT.............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_9453   91   TGGATTGGCTATATCTATTACAGTGGGAACACCAACTACAACCCCTCCCTCAAAAGTCGAGTCACCATTTCAGTAGACACGTCGAAGAAG  180
V  94.2% (228/242)  IGHV4-59*01  139  ........G...................G........................G..............A..............C.....C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  R  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  S  A  P  Y  T  Q  K  T  R  A 
                    Query_9453   181  CAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGTGCCCCATATACGCAAAAAACTAGAGCT  270
V  94.2% (228/242)  IGHV4-59*01  229  .............A......C..................A.......G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  11   -------------------------------------------------------------------------------------.....  15

                                      -------------->                                  
                                       F  R  L  D  Y  W  G  Q  G  S  L  V  T  V  S  A  
                    Query_9453   271  TTTCGCCTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCGCAG  319
J  95.2% (40/42)    IGHJ4*02     7    -------....................A.................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_310321

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           420     7e-120
IGHD1-20*01                                                                                           29.5    2e-04 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD1-20*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGAAAA	TATAACTGGAACGAC	GGAAT	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATC	ARVGKYNWNDGIAFDI	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	282	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N 
                    Query_9454   1    CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAAC  90
V  95.6% (282/295)  IGHV1-69*12  1    ..............G................................C........................................G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  F  A  V  N  W  V  R  Q  A  P  G  H  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  K  Y 
                    Query_9454   91   AGCTTTGCTGTCAACTGGGTGCGACAGGCCCCTGGACATGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAACAAAATAC  180
V  95.6% (282/295)  IGHV1-69*12  91   ....A....A...G........................A..........................................G....C...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  V  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_9454   181  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGGACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGAC  270
V  95.6% (282/295)  IGHV1-69*12  181  ..................................................C....C..................................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  V  G  K  Y  N  W  N  D  G  I  A  F  D  I  W  G  Q  G  T  I  V  T 
                    Query_9454   271  ACGGCCGTTTATTATTGTGCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATCTGGGGCCAAGGGACAATAGTCACC  360
V  95.6% (282/295)  IGHV1-69*12  271  ........G.....C..........-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (15/15)   IGHD1-20*01  3    ---------------------------------...............------------------------------------------  17
J  95.7% (45/47)    IGHJ3*02     4    -----------------------------------------------------...T..........................G......  40

                                                
                                       V  S  S  
                    Query_9454   361  GTCTCTTCAG  370
J  95.7% (45/47)    IGHJ3*02     41   ..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_174977

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           350     8e-99
IGHD2-15*01                                                                                           12.2    32   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAT	TAGCTG	TATCCGCGCCCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTAGCTGTATCCGCGCCCTACTACTTTGACTAC	ARRLAVSAPYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  T  N  S  N  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_9455   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCACCAATAGTAATTACTACTGGGCCTGGATCCGCCAACCCCCAGGGAAGGGG  90
V  94.8% (237/250)  IGHV4-39*01  49   ...............................G........G..G.....G...........G............G...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9455   91   CTGGAGTGGATTGCGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  94.8% (237/250)  IGHV4-39*01  139  .............G..................................................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  V  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  R  L  A  V  S  A  P 
                    Query_9455   181  AAGAACCAGTTCTCCCTGAGGGTGACCTCTGTGACCGCCGCAGACACGGCTCTATATTACTGTGCGAGACGATTAGCTGTATCCGCGCCC  270
V  94.8% (237/250)  IGHV4-39*01  229  ...................A.C...G.........................G.G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-15*01  19   -------------------------------------------------------------------------......-----------  24

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  S  L  V  A  V  S  S  
                    Query_9455   271  TACTACTTTGACTACTGGGGCCAGGGATCCCTGGTCGCCGTCTCCTCAG  319
J  95.8% (46/48)    IGHJ4*02     1    -..........................A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_174976

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     8e-121
IGHD1-26*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	GGG	GGTCTAGTGGAAGGTACTAC	CTCCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTAC	ARGGLVEGTTSFFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	280	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_9456   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCAACCTA  90
V  96.9% (280/289)  IGHV5-51*03  6    ..................................................................................A.C.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  F  G  W  V  R  Q  I  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_9456   91   CTGGTTCGGCTGGGTGCGCCAGATACCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.9% (280/289)  IGHV5-51*03  96   ....A...................G..........................G......................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9456   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (280/289)  IGHV5-51*03  186  ............................................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  A  R  G  G  L  V  E  G  T  T  S  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9456   271  CATTTATTACTGTGCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCGTC  360
V  96.9% (280/289)  IGHV5-51*03  276  ...G............A..-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  85.0% (17/20)    IGHD1-26*01  1    ----------------------...A......G..C......------------------------------------------------  20
J  97.7% (43/44)    IGHJ4*02     5    ------------------------------------------------.......................................C..  46

                                        
                                        
                    Query_9456   361  AG  362
J  97.7% (43/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_174975

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           311     4e-87
IGHD3-10*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGG	CCGAAGGTACCT	TGGGTCGGGGAG	ATTTATACCGTTTTCG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCGAAGGTACCTTGGGTCGGGGAGATTTATACCGTTTTCGGACTAT	ARGRRYLGSGRFIPFSDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  E  V  Y  G  G  S  F  N  N  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9457   1    ACCCTGTCCCTCACCTGCGAAGTCTATGGTGGGTCCTTCAATAATTACTTCTGGAACTGGATCCGCCAGCCCCCAGGAAAGGGTCTGGAG  90
V  90.6% (222/245)  IGHV4-34*01  49   ...................CT...................G.GG.....A.....G.....................G.....G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  V  S  H  S  G  N  T  N  Y  N  L  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_9457   91   TGGATTGGGGAAGTCAGTCATAGTGGCAACACCAACTACAACCTGTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-34*01  139  ............A...A.........A.G..............C............................G.................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  Y  S  L  N  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  Y  L  G  S  G  R 
                    Query_9457   181  CAGTACTCCCTGAACCTGGCTTCTGTGACCGCCGCGGACACGGCTGTCTACTACTGTGCGAGGGGCCGAAGGTACCTTGGGTCGGGGAGA  270
V  90.6% (222/245)  IGHV4-34*01  229  ....T.........G...AGC..........................G..T...........A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  91.7% (11/12)    IGHD3-10*01  10   -----------------------------------------------------------------------------...T........-  21

                                      -------------------->                                  
                                       F  I  P  F  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9457   271  TTTATACCGTTTTCGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.5% (39/40)    IGHJ4*02     9    ---------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_174974

Length=410
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     9e-121
IGHD3-16*01                                                                                           35.3    4e-06 
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCTA	GTATTATGTTTACATTTGGGGGAG	AAACACACCGTCTGAC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAGTATTATGTTTACATTTGGGGGAGAAACACACCGTCTGACTGATGCTTTTGAGATC	ARASIMFTFGGETHRLTDAFEI	289	354	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	73	1	0	98.6
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	282	11	0	96.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  R  Y  T  F  S  
                    Query_9458   2    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTAGATACACCTTTAGCA  91
V  96.2% (282/293)  IGHV5-51*03  2    ....G.....................................................................G......G.....C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  E  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  
                    Query_9458   92   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGGAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATACCAGATACG  181
V  96.2% (282/293)  IGHV5-51*03  92   ...................................A....................A................................A  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      G  P  S  F  E  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_9458   182  GGCCGTCCTTCGAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  96.2% (282/293)  IGHV5-51*03  182  .C.........C................C.............................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------------------CDR3-IMGT--------------------------->       
                                      T  A  M  Y  Y  C  A  R  A  S  I  M  F  T  F  G  G  E  T  H  R  L  T  D  A  F  E  I  W  G  
                    Query_9458   272  CCGCCATGTATTACTGCGCGAGAGCTAGTATTATGTTTACATTTGGGGGAGAAACACACCGTCTGACTGATGCTTTTGAGATCTGGGGCC  361
V  96.2% (282/293)  IGHV5-51*03  272  ................T......-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  91.7% (22/24)    IGHD3-16*01  1    ---------------------------........A....G..........---------------------------------------  24
J  96.0% (48/50)    IGHJ3*02     1    -------------------------------------------------------------------............T..........  23

                                                                 
                                      Q  G  T  V  V  T  V  S  S  
                    Query_9458   362  AAGGGACAGTGGTCACCGTCTCTTCAG  388
J  96.0% (48/50)    IGHJ3*02     24   ........A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40183344


Query= Query_174973

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         294     7e-82
IGHD2-2*02                                                                                            21.8    0.043
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGGGGGG	TTGTAGTACTTCCAGTTGCCATA	N/A	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGGGGGGTTGTAGTACTTCCAGTTGCCATAACTTCTACGACTACGCTATGGACGTC	ARAGGGCSTSSCHNFYDYAMDV	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	45	6	0	88.2
CDR2-IMGT	100	123	24	18	6	0	75
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	232	210	22	0	90.5


Alignments

                                        <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                         C  A  A  S  G  F  T  F  S  Y  Y  A  L  H  W  V  R  Q  S  P  G  K  G  L  E  W  V  A  L  I 
                    Query_9459     13   TGTGCAGCCTCTGGATTCACCTTCAGTTACTATGCTCTTCACTGGGTCCGCCAGTCTCCAGGCAAGGGACTGGAGTGGGTGGCACTCATT  102
V  90.5% (210/232)  IGHV3-30-3*01  64   ...........................AG.......A.G...............G.............G...............G.T..A  153
                                         C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                        -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                         S  F  D  G  G  V  E  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  K  K  T  L  Y  L 
                    Query_9459     103  TCATTTGATGGAGGCGTTGAATACTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAACTCCAAGAAGACACTGTATCTC  192
V  90.5% (210/232)  IGHV3-30-3*01  154  ....A.......A..AA.A.....................A...........................T........C..G........G  243
                                         S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                        --------------------------------------------><----------------------------CDR3-IMGT-------
                                         Q  M  N  S  L  T  S  E  D  T  A  V  Y  Y  C  A  R  A  G  G  G  C  S  T  S  S  C  H  N  F 
                    Query_9459     193  CAAATGAACAGCCTGACATCTGAGGACACGGCTGTCTATTACTGTGCGAGAGCGGGGGGGGGTTGTAGTACTTCCAGTTGCCATAACTTC  282
V  90.5% (210/232)  IGHV3-30-3*01  244  ................G.G................G................--------------------------------------  295
                                         Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  82.6% (19/23)    IGHD2-2*02     7    --------------------------------------------------------------........G.A....C...T...-----  29
J  94.9% (56/59)    IGHJ6*02       4    -------------------------------------------------------------------------------------...A.  8

                                        -------------------->                                 
                                         Y  D  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9459     283  TACGACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  336
J  94.9% (56/59)    IGHJ6*02       9    ...T......G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_321670

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           369     2e-104
IGHD2-8*02                                                                                            10.3    138   
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGGGCATTCGAGCCT	CTGGT	CC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGGGCATTCGAGCCTCTGGTCCCAACTGGTTCGACCCC	AKGGIRASGPNWFDP	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	70	4	0	94.6
CDR1-IMGT	77	100	24	17	7	0	70.8
FR2-IMGT	101	151	51	46	5	0	90.2
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	104	10	0	91.2
CDR3-IMGT (germline)	290	296	7	6	1	0	85.7
Total	N/A	N/A	294	265	29	0	90.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  T  S  G  G  I  L  N  
                    Query_9460   3    AGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACCTCTGGAGGCATTTTGAACA  92
V  90.1% (265/294)  IGHV1-69*12  2    .............G........G.............................................G.T..........CC..C.G..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  G  I  N  W  L  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  M  P  I  F  G  P  A  N  Y  
                    Query_9460   93   ACTATGGGATCAATTGGCTCCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCATCATGCCTATCTTTGGTCCAGCAAACTACG  182
V  90.1% (265/294)  IGHV1-69*12  92   G.....CT....GC...G.G......................................G.....C............A............  181
                                      S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  N  T  A  Y  M  E  L  S  S  L  R  S  E  D  
                    Query_9460   183  CACAGAAGTTCCAGGGCAGAGTCACCATTACCGCGGACGAGTCCACAAACACAGCCTACATGGAATTGAGCAGCCTGAGATCTGAGGACA  272
V  90.1% (265/294)  IGHV1-69*12  182  .........................G..............A.....G.G...............GC........................  271
                                      A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  F  C  A  K  G  G  I  R  A  S  G  P  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  
                    Query_9460   273  CAGCCATGTACTTCTGTGCGAAAGGGGGCATTCGAGCCTCTGGTCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCT  362
V  90.1% (265/294)  IGHV1-69*12  272  .G...G....T.A........G..------------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                    
D  100.0% (5/5)     IGHD2-8*02   12   ---------------------------------------.....----------------------------------------------  16
J  100.0% (50/50)   IGHJ5*02     2    ----------------------------------------------............................................  45

                                            
                                      S  S  
                    Query_9460   363  CCTCAG  368
J  100.0% (50/50)   IGHJ5*02     46   ......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_174970

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           371     8e-105
IGHD6-6*01                                                                                            16.1    2.6   
IGHJ6*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-6*01	IGHJ6*02	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGGGGCCACGGAA	ATAGCACCTCG	GGTCCGCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGGGGCCACGGAAATAGCACCTCGGGTCCGCCACTACTACGCCATGGACGTC	ARGGPRK*HLGSATTTPWTS	289	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	17	7	0	70.8
FR3-IMGT	175	288	114	103	11	0	90.4
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	293	265	28	0	90.4


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  T  C  K  S  S  G  G  T  F  S 
                    Query_9461   1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAGGGTCACCTGCAAGTCTTCTGGCGGCACCTTCAGC  90
V  90.4% (265/293)  IGHV1-69*01  1    .......................G...............................A....T........G.......A............  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  D  A  L  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  M  V  E  E  A  D  Y 
                    Query_9461   91   AGCGATGCTCTCAACTGGGTGCGACAGGCCCCTGGTCAGGGGCTTGAGTGGATGGGAGGGATCATCCCTATGGTCGAAGAAGCAGACTAC  180
V  90.4% (265/293)  IGHV1-69*01  91   ...T.....A...G.....................A..A................................CT.T.GTAC....A.....  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       G  P  K  F  R  G  R  V  S  I  T  A  D  E  S  T  S  T  T  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_9461   181  GGACCGAAGTTCCGGGGCAGAGTCTCGATTACCGCGGACGAATCGACGAGTACAACCTATATGGAGCTGAGCAGCCTGAGATCTGAAGAC  270
V  90.4% (265/293)  IGHV1-69*01  181  .C..A........A..........A...................C.....C...G....C..........................G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><------------------------CDR3-IMGT------------------------>             
                                       T  A  V  Y  Y  C  A  R  G  G  P  R  K  *  H  L  G  S  A  T  T  T  P  W  T  S  G  A  K  G 
                    Query_9461   271  ACGGCCGTCTATTACTGTGCGAGGGGGGGGCCACGGAAATAGCACCTCGGGTCCGCCACTACTACGCCATGGACGTCTGGGGCCAAGGGA  360
V  90.4% (265/293)  IGHV1-69*01  271  ........G..............-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  90.9% (10/11)    IGHD6-6*01   5    --------------------------------------......G....-----------------------------------------  15
J  90.6% (48/53)    IGHJ6*02     10   ---------------------------------------------------------.........GT......................  42

                                                          
                                       L  Q  S  S  S  P   
                    Query_9461   361  CTACAGTCATCGTCTCCTCA  380
J  90.6% (48/53)    IGHJ6*02     43   .C..G....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_324989

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9462   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_9462   91   CTCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..G...............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G 
                    Query_9462   181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .........................G................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9462   271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  320
D  100.0% (22/22)   IGHD3-10*01  20   .........-----------------------------------------  28
J  100.0% (34/34)   IGHJ4*02     13   ----------------..................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_174978

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           316     2e-88
IGHD2-21*02                                                                                           16.1    2.3  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACCCTACGATCTTGCAATCGACTACGA	TGGTGACT	CCGAAACGACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGAACCCTACGATCTTGCAATCGACTACGATGGTGACTCCGAAACGACTTTTGACTAC	TREPYDLAIDYDGDSETTFDY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  D  F  S  R  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9463   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCGACTTCAGTCGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGC  90
V  90.4% (226/250)  IGHV3-48*03  47   ....................G..............AC.......A........................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  Y  I  S  S  R  G  S  V  V  K  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9463   91   AGTGGGTCTCGTACATCAGTAGTAGGGGAAGTGTCGTAAAGCACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  90.4% (226/250)  IGHV3-48*03  137  .......T..A.....T........T..T...AC.A..T.CT......................A.........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  S  I  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  E  P  Y  D  L  A  I  
                    Query_9463   181  AGAACTCAATTTATCTGCAAATGAACAGCCTGCGAGCCGAGGACACGGCTGTATATTATTGTACGAGAGAACCCTACGATCTTGCAATCG  270
V  90.4% (226/250)  IGHV3-48*03  227  ........C.G.....................A...................T.....C...G.......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      DR3-IMGT-------------------------->                                  
                                      D  Y  D  G  D  S  E  T  T  F  D  Y  W  G  Q  G  T  L  V  T  V  A  S  
                    Query_9463   271  ACTACGATGGTGACTCCGAAACGACTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCGCCTCAG  339
D  100.0% (8/8)     IGHD2-21*02  13   -------........------------------------------------------------------  20
J  97.7% (42/43)    IGHJ4*02     6    --------------------------....................................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_273810

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         344     6e-97
IGHD1-20*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCTGGGTTATTG	GGTATAA	GGGATT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCTGGGTTATTGGGTATAAGGGATTCTTTGACTCC	ARDPWVIGYKGFFDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9464     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-30-3*01  47   ..............................................C...........................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  T  S  Y  D  G  N  Y  K  Y  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_9464     91   AGTGGGTGGCAGTTACATCATATGATGGAAACTACAAATATTACGCGGACTCCGTGAAGGGCCGTCTCACCATCTCCAGAGACAATTCCG  180
V  94.0% (235/250)  IGHV3-30-3*01  137  ...............T..............G.A.T.....C.....A.................AT.......................A  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        E  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  P  W  V  I  G  Y  
                    Query_9464     181  AGAACACTCTCTATCTGCAAATGAACAGCCTCAGAGTTGAGGACACGGCTGTGTACTACTGTGCGAGAGATCCCTGGGTTATTGGGTATA  270
V  94.0% (235/250)  IGHV3-30-3*01  227  .......G..G....................G....C..................T..............--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-20*01    1    ------------------------------------------------------------------------------------......  6

                                        ---------------->                                  
                                        K  G  F  F  D  S  W  G  L  G  T  L  V  T  V  S  S  
                    Query_9464     271  AGGGATTCTTTGACTCCTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (7/7)     IGHD1-20*01    7    .--------------------------------------------------  7
J  95.5% (42/44)    IGHJ4*02       5    -------........A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_231817

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           321     6e-90
IGHD6-6*01                                                                                            19.9    0.15 
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-6*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCC	AGTATAGAAGATCGTC	GGCTGGT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCAGTATAGAAGATCGTCGGCTGGTTGCTTTTGATATC	ARPSIEDRRLVAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  R  G  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  Q 
                    Query_9465   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGGGGTTACTACTGGAGCTGGGTCCGTCAGCCCCCAGGGAAGGGGCTGCAG  90
V  92.2% (224/243)  IGHV4-34*01  49   .........................................T..................A....C.....................G..  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  I  N  H  R  G  S  S  Y  H  S  P  S  P  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_9465   91   TGGCTTGGCGAAATCAACCATAGAGGAAGTAGCTATCACAGCCCGTCCCCCAAGAGTCGAGTCACCATGTCAGTTGACACGTCCAAGAAC  180
V  92.2% (224/243)  IGHV4-34*01  139  ...A....G........T.....T.....C.C.A.CT...A........T..................A.....A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  S  I  E  D  R  R  L  V 
                    Query_9465   181  CATTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGACCCAGTATAGAAGATCGTCGGCTGGTT  270
V  92.2% (224/243)  IGHV4-34*01  229  ..G............................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (14/16)    IGHD6-6*01   2    ------------------------------------------------------------------.......C..C.....--------  17
J  100.0% (47/47)   IGHJ3*02     4    -----------------------------------------------------------------------------------------.  4

                                      ----------->                                  
                                       A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9465   271  GCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  316
J  100.0% (47/47)   IGHJ3*02     5    ..............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_231815

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           248     8e-68
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	ARGLLIEDPNYVWGSFRRNHNCYTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	92	22	0	80.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	201	43	0	82.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  R  L  E 
                    Query_9466   1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGAGACTGGAG  90
V  82.4% (201/244)  IGHV4-59*01  49   ..................A....C.......G.......A...G..........AG....A.C........C.......A.G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_9466   91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  82.4% (201/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  N  Y 
                    Query_9466   181  CAGTTGTCTCTCAACCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCAACTAT  270
V  82.4% (201/244)  IGHV4-59*01  229  .....C..C..G..G....G.TCT.....................GT.....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_9466   271  GTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  94.7% (36/38)    IGHJ3*01     13   --------------------------------------...................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_231812

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           361     4e-102
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TGGACTTCAGTC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGACTTCAGTCCTTTGACTAC	ARDGLQSFDY	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	241	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  L  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9467   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGTAGTGGTGGTTATCTCTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (241/251)  IGHV4-31*03  49   ..................A......................C...........CTA..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  E  T  S 
                    Query_9467   91   CTGGAGTGGATTGGTTACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTTACCATATCACTAGAGACGTCT  180
V  96.0% (241/251)  IGHV4-31*03  139  ..............G.......A...................................A...................G....C......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  L  Q  S  F  D 
                    Query_9467   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGGACTTCAGTCCTTTGAC  270
V  96.0% (241/251)  IGHV4-31*03  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  100.0% (44/44)   IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9467   271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (44/44)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_231813

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           344     6e-97
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGACC	TACGATTTTTGGAG	GGACC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGACCTACGATTTTTGGAGGGACCACTACTACGCTATGGACGTC	ARVTYDFWRDHYYAMDV	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  T  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9468   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACCACTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.4% (234/248)  IGHV4-39*01  49   ...............................G........G..G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  V  Y  Y  I  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S 
                    Query_9468   91   CTGGAATGGATTGGGACCGTCTATTATATTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  94.4% (234/248)  IGHV4-39*01  139  .....G..........GTA.........G.............................A.....................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  R  L  S  S  L  T  A  A  D  T  A  V  Y  H  C  A  R  V  T  Y  D  F  W  R 
                    Query_9468   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTTTGACCGCCGCAGACACGGCTGTCTATCACTGTGCGAGGGTGACCTACGATTTTTGGAGG  270
V  94.4% (234/248)  IGHV4-39*01  229  ...................A..........G......................G...T..........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (14/14)   IGHD3-3*01   5    ---------------------------------------------------------------------------..............-  18

                                      MGT-------------------->                                 
                                       D  H  Y  Y  A  M  D  V  W  D  Q  G  T  T  V  I  V  S  S 
                    Query_9468   271  GACCACTACTACGCTATGGACGTCTGGGACCAGGGGACCACGGTCATCGTCTCCTCA  327
J  92.5% (49/53)    IGHJ6*02     10   ----.........G..............G...A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_324984

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           399     3e-113
IGHD6-19*01                                                                                           21.8    0.046 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAAAG	ATAGTAGTGGCTGG	CACAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAAAGATAGTAGTGGCTGGCACAATTACGGTATGGACGTC	AREKDSSGWHNYGMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  R  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  L  S  S  Y
                    Query_9469   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTGAGTAGCTA  90
V  93.8% (273/291)  IGHV1-69*01  6    ..................G.............A................................................C..C.....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  T  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  G  I  I  P  I  F  R  K  T  D  Y  A  Q
                    Query_9469   91   TGTCACCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCAGGGATCATCCCTATTTTTAGAAAAACAGACTACGCACA  180
V  93.8% (273/291)  IGHV1-69*01  96   ..CT.T............................................G...............C...G.T.C.G..A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  V  D  E  S  T  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  G
                    Query_9469   181  GAAGTTCCAGGGCAGAGTCACGATTACCGTGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGG  270
V  93.8% (273/291)  IGHV1-69*01  186  .............................C.......................................C...........G.......C  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  E  K  D  S  S  G  W  H  N  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_9469   271  CGTGTATTACTGTGCGAGAGAAAAAGATAGTAGTGGCTGGCACAATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  93.8% (273/291)  IGHV1-69*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD6-19*01  5    --------------------------....C.........--------------------------------------------------  18
J  100.0% (48/48)   IGHJ6*02     15   ----------------------------------------------............................................  58

                                          
                                        S 
                    Query_9469   361  CTCA  364
J  100.0% (48/48)   IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_8973

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           355     3e-100
IGHD6-19*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CTCTGTGAC	CAGTGCCTGGT	CGTTTGGTCCCCCCCCACGACTCT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACTCTGTGACCAGTGCCTGGTCGTTTGGTCCCCCCCCACGACTCTACTTCTTTGACTCC	ARHSVTSAWSFGPPPRLYFFDS	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	239	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  T  T  Y  H  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9470   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTACTACTTACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  95.2% (239/251)  IGHV4-39*01  49   ..............................................G..G....T..................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  S  Y  S  G  S  T  D  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S 
                    Query_9470   91   CTGGAGTGGATTGGGAGTATCTCTTATAGTGGGAGCACCGACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  95.2% (239/251)  IGHV4-39*01  139  ......................A................T..................A.....................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  P  D  T  A  V  Y  Y  C  A  R  H  S  V  T  S  A  W 
                    Query_9470   181  AAGAATCAATTCTCCCTGAAGCTGAGCTCTGTGACCGCCCCAGACACGGCTGTATATTACTGTGCGAGACACTCTGTGACCAGTGCCTGG  270
V  95.2% (239/251)  IGHV4-39*01  229  .....C..G..............................G.............G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD6-19*01  9    --------------------------------------------------------------------------------.....G....  18

                                      --CDR3-IMGT--------------------------->                                  
                                       S  F  G  P  P  P  R  L  Y  F  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9470   271  TCGTTTGGTCCCCCCCCACGACTCTACTTCTTTGACTCCTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  343
D  90.9% (10/11)    IGHD6-19*01  19   .------------------------------------------------------------------------  19
J  93.8% (45/48)    IGHJ4*02     1    -------------------------...A........A..................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_231818

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           406     1e-115
IGHD3-3*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCTCC	TACGAGTTTTGGAGTGGTTCTTAT	GTA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCTCCTACGAGTTTTGGAGTGGTTCTTATGTATACTACGATATGGACGTC	ARASYEFWSGSYVYYDMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  T  F  I  S  Y
                    Query_9471   1    GCAGCTGGTGCAGTCTGGGGCCGAAGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCATCAGTTA  90
V  94.8% (275/290)  IGHV1-69*01  6    .....................T..G.................................................G........G...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  V  S  W  V  R  L  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  L  G  A  P  N  Y  A  Q
                    Query_9471   91   TGGTGTCAGCTGGGTGCGACTGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGAATCATCCCTATCTTAGGTGCACCAAACTACGCACA  180
V  94.8% (275/290)  IGHV1-69*01  96   ..C.A...............A.................................G..............T...A..G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_9471   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTCAGATCTGAGGACACGGC  270
V  94.8% (275/290)  IGHV1-69*01  186  ........................................................................G.................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        F  Y  Y  C  A  R  A  S  Y  E  F  W  S  G  S  Y  V  Y  Y  D  M  D  V  W  G  Q  G  T  S  V
                    Query_9471   271  CTTTTATTACTGTGCGAGAGCCTCCTACGAGTTTTGGAGTGGTTCTTATGTATACTACGATATGGACGTCTGGGGCCAAGGGACCTCGGT  360
V  94.8% (275/290)  IGHV1-69*01  276  .G.G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  91.7% (22/24)    IGHD3-3*01   5    -------------------------.....T.............A....-----------------------------------------  28
J  96.1% (49/51)    IGHJ6*02     12   ----------------------------------------------------.......G.........................A....  49

                                                   
                                        T  V  S  S 
                    Query_9471   361  CACCGTCTCCTCA  373
J  96.1% (49/51)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_231819

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD1-1*01                                                                                            14.1    8.3  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTACCCTA	AACTGGGACG	GACCTTCTGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTACCCTAAACTGGGACGGACCTTCTGCTTTTGACCAC	ARLTLNWDGPSAFDH	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  D  P  M  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_9472   1    ACCCTGTCCCTCACCTGCGCTGTCTCCGGTGACCCCATGACTAGTTATTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  91.8% (223/243)  IGHV4-59*01  49   ..................A.......T....G.T....C.G......C........C........................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  L  S  I  D  T  S  K  N 
                    Query_9472   91   TGGATTGGATATATCTACTACAGTGGGAGCACCAACTACAACCCTTCCCTCAGGAGTCGAGTCACCTTATCGATAGACACGTCCAAGAAC  180
V  91.8% (223/243)  IGHV4-59*01  139  ........G........T..........................C.......A.............A....AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       H  F  S  L  S  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  T  L  N  W  D  G  P  S 
                    Query_9472   181  CACTTCTCCCTGAGCCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGACTTACCCTAAACTGGGACGGACCTTCT  270
V  91.8% (223/243)  IGHV4-59*01  229  ..G..........AG................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD1-1*01   6    ------------------------------------------------------------------------......A...--------  15

                                      ----------->                                  
                                       A  F  D  H  W  G  R  G  T  L  V  A  V  S  S  
                    Query_9472   271  GCTTTTGACCACTGGGGCCGGGGAACCCTGGTCGCCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---......T.........A.............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_181861

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            321     6e-90
IGHD4-4*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGCTTCTGGAGA	TGACTACA	ATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGCTTCTGGAGATGACTACAATCTTGACTCC	ARVASGDDYNLDS	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9473  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGTGACTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.2% (227/249)  IGHV3-7*03  47   ....................................C.......AG............C...............................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  Y  I  N  H  D  S  T  E  K  Y  Y  V  E  S  L  R  G  R  L  T  I  S  R  D  N  A  
                    Query_9473  91   AGTGGGTGGCCTACATAAACCATGATTCAACTGAGAAGTACTATGTGGAGTCATTGAGGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  91.2% (227/249)  IGHV3-7*03  137  ...........A.......G..A...GG..G......A...........C..TG...A.......T........................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                     K  N  S  L  F  L  Q  M  E  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  A  S  G  D  D  Y  
                    Query_9473  181  AGAACTCACTGTTTCTCCAAATGGAGAGCCTGAGAGCCGACGACACGGCCGTTTATTACTGTGCGAGAGTCGCTTCTGGAGATGACTACA  270
V  91.2% (227/249)  IGHV3-7*03  227  ............A...G......A.C..............G...........G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD4-4*01  1    ----------------------------------------------------------------------------------........  8

                                     ---------->                                  
                                     N  L  D  S  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_9473  271  ATCTTGACTCCTGGGGCCAGGGTACCCTGGTCTCCGTCTCCTCAG  315
J  92.9% (39/42)    IGHJ4*02    7    ---......A............A.........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_177653

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           338     5e-95
IGHD1-26*01                                                                                           14.1    8.6  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GGAC	TGGGAGTTTCTAC	TTCGGGGGGGTGGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGAGGACTGGGAGTTTCTACTTCGGGGGGGTGGGGACTAC	ATEDWEFLLRGGGDY	249	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	236	20	0	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  N  V  W  M  R  W  V  R  Q  A  P  G  R  G  L  
                    Query_9474   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACTTTCAATAATGTCTGGATGAGGTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  92.2% (236/256)  IGHV3-15*01  47   .......T............G.....................G...C.C.........C......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  D  G  R  I  K  S  M  T  A  G  G  T  T  D  Y  A  A  S  V  K  D  R  F  T  I  S  R  D  
                    Query_9474   91   AGTGGGATGGCCGTATTAAAAGCATGACTGCTGGTGGGACAACAGACTACGCTGCATCCGTGAAAGACAGATTCACCATCTCAAGAGATG  180
V  92.2% (236/256)  IGHV3-15*01  137  ......T.................AA....A.........................C.........G.......................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------------CDR3
                                      D  S  Q  S  T  L  Y  L  E  M  K  S  L  K  T  E  D  T  A  V  Y  F  C  A  T  E  D  W  E  F  
                    Query_9474   181  ATTCACAGAGCACGCTGTATCTGGAAATGAAGAGCCTGAAAACCGAGGACACAGCCGTGTATTTCTGTGCCACAGAGGACTGGGAGTTTC  270
V  92.2% (236/256)  IGHV3-15*01  227  .....A.A.A.............C.......C...............................A....A.......--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  84.6% (11/13)    IGHD1-26*01  8    --------------------------------------------------------------------------------......C.A.  17

                                      -IMGT----------------->                                  
                                      L  L  R  G  G  G  D  Y  W  G  R  G  I  L  V  T  V  S  S  
                    Query_9474   271  TACTTCGGGGGGGTGGGGACTACTGGGGCCGGGGAATCCTGGTCACCGTCTCCTCAG  327
D  84.6% (11/13)    IGHD1-26*01  18   ...------------------------------------------------------  20
J  95.0% (38/40)    IGHJ4*02     9    -----------------.............A.....C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_181863

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           350     8e-99
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	C	GGGACTTATGC	CAACTCGCCA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGACTTATGCCAACTCGCCATACTGGTACTTCGATCTC	ASGTYANSPYWYFDL	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9475   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCGGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.2% (236/248)  IGHV4-39*02  49   ...................C...........G.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  T  G  S  A  Y  H  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_9475   91   CTGGAGTGGATTGCGAGTATCTATTATACTGGGAGCGCCTACCACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  95.2% (236/248)  IGHV4-39*02  139  .............G..............G.......A.....T...............................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       N  N  H  F  S  L  Q  L  S  S  V  T  D  A  D  T  A  V  Y  Y  C  A  S  G  T  Y  A  N  S  P 
                    Query_9475   181  AACAACCACTTCTCCCTGCAGCTGAGCTCTGTGACCGACGCAGACACGGCTGTCTATTACTGTGCGAGCGGGACTTATGCCAACTCGCCA  270
V  95.2% (236/248)  IGHV4-39*02  229  ..G...............A..................C...............G..............----------------------  296
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.9% (10/11)    IGHD3-16*01  20   ---------------------------------------------------------------------....G......----------  30

                                      ----------------->                                  
                                       Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  A  S  S  
                    Query_9475   271  TACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGCCTCCTCAG  322
J  98.1% (51/52)    IGHJ2*01     2    ...........................................T........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_181862

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           355     3e-100
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_9476   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGCC  93
V  96.0% (237/247)  IGHV4-31*02  50   .....TCC...A.....................C......C.............................C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_9476   94   TGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  96.0% (237/247)  IGHV4-31*02  140  ....G.........T.C.........................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  
                    Query_9476   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCG  273
V  96.0% (237/247)  IGHV4-31*02  230  ...................................................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  100.0% (51/51)   IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9476   274  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (51/51)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_181865

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           405     3e-115
IGHD3-3*01                                                                                            23.8    0.012 
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	ACTCTCA	TTTTGGAGTGGT	GATCCCA	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACTCTCATTTTGGAGTGGTGATCCCAAACTGGTTCGACCCC	ANSHFGVVIPNWFDP	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	273	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  Y  G  G  T  F  S  S  Y
                    Query_9477   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTATGGAGGCACCTTCAGCAGCTA  90
V  95.1% (273/287)  IGHV1-69*01  6    ....................................................................C.....................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  Y  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  R  A  H  Y  A  Q
                    Query_9477   91   TGCCTACAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATATTTGGTAGAGCACACTACGCACA  180
V  95.1% (273/287)  IGHV1-69*01  96   ...TAT..G.........................................................C.......C....A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  E  S  T  G  T  A  Y  M  D  L  S  G  L  I  S  E  D  T  A
                    Query_9477   181  GAGGTTCCAGGGCAGAGTCACGATAACCGCGGACGAATCCACGGGCACAGCCTACATGGACCTGAGCGGCCTGATATCTGAGGACACGGC  270
V  95.1% (273/287)  IGHV1-69*01  186  ..A.....................T..................A................G......A......G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  N  S  H  F  G  V  V  I  P  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9477   271  CGTGTATTACTGTGCGAACTCTCATTTTGGAGTGGTGATCCCAAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.1% (273/287)  IGHV1-69*01  276  .................-------------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                           
D  100.0% (12/12)   IGHD3-3*01   11   ------------------------............------------------------------------------------------  22
J  100.0% (47/47)   IGHJ5*02     3    -------------------------------------------...............................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_181864

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           358     4e-101
IGHD3-16*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGCTCAGGGGGGGAACTGC	GGGGGAGT	CC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCTCAGGGGGGGAACTGCGGGGGAGTCCTGACTAC	ARGGSGGELRGSPDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  F  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9478   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATTTCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-21*01  47   ..............................................C...AG......C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  N  S  R  S  S  N  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9478   91   AGTGGGTCTCATCCATTAATAGTCGTAGTAGTAACATATATTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  96.0% (239/249)  IGHV3-21*01  137  ..................G....A........T.......C......................................A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  S  G  G  E  L  
                    Query_9478   181  AGAACTCACTGTATCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGGGCTCAGGGGGGGAACTGC  270
V  96.0% (239/249)  IGHV3-21*01  227  .........................C...........................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ---------------->                                  
                                      R  G  S  P  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_9478   271  GGGGGAGTCCTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  321
D  100.0% (8/8)     IGHD3-16*01  18   ........-------------------------------------------  25
J  97.6% (40/41)    IGHJ4*02     8    ----------...................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_181867

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           344     6e-97
IGHD2-21*01                                                                                           10.3    123  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TGTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTGTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFVQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  I  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  N 
                    Query_9479   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCATCATCAGGAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGAAC  90
V  94.4% (234/248)  IGHV4-31*03  49   ...............................G.TC......C....................C........................GG.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9479   91   CTGGAGTGGATTGGGTACATCTATTATAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCT  180
V  94.4% (234/248)  IGHV4-31*03  139  ..........................C.......G.............C......................C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  V  Q  E 
                    Query_9479   181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGGTCTTCTCTATTTGTCCAAGAA  270
V  94.4% (234/248)  IGHV4-31*03  229  ..........................C.............................T...........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD2-21*01  22   ---------------------------------------------------------------------------.....----------  26

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9479   271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_181866

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           291     6e-81
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	242	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	25	24	22	2	0	91.7
CDR1-IMGT	26	55	30	23	1	6	76.7
FR2-IMGT	56	106	51	45	6	0	88.2
CDR2-IMGT	107	127	21	15	6	0	71.4
FR3-IMGT	128	241	114	106	8	0	93
CDR3-IMGT (germline)	242	249	8	8	0	0	100
Total	N/A	N/A	248	219	23	6	88.3


Alignments

                                      <-------FR1-IMGT-------><----------CDR1-IMGT---------><--------------------FR2-IMGT-------
                                       L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  L 
                    Query_9480   2    CTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCCTG  91
V  88.3% (219/248)  IGHV4-34*01  52   ....................C..T............------........C.......G....AT.........C...........G...  135
                                       L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  K 
                    Query_9480   92   GAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCAAG  181
V  88.3% (219/248)  IGHV4-34*01  136  ..G................A..A.AG.....G..C.........C.C.......A................A..................  225
                                       E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------------CDR3
                                       N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  W 
                    Query_9480   182  AACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCTGG  271
V  88.3% (219/248)  IGHV4-34*01  226  .................GC............C........................C...........----------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                      
D  91.7% (11/12)    IGHD6-19*01  7    ------------------------------------------------------------------------------....G.......  18

                                      -IMGT------------------------>                                 
                                       G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_9480   272  GGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  334
J  91.7% (44/48)    IGHJ6*02     15   ---------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_181869

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           329     3e-92
IGHD3-22*01                                                                                           21.8    0.040
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGAA	AGTGGTTATTA	N/A	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGAAAGTGGTTATTATGAAGCTTTTGATATG	ARSESGYYEAFDM	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  L  S  N  Y  D  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9481   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCCTCAGCAACTATGATATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.3% (229/248)  IGHV3-30*04  47   ...................................A..T....T.G.....C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  I  I  S  Y  D  G  G  N  K  N  Y  A  D  S  V  R  G  R  F  T  L  S  R  D  N  S  
                    Query_9481   91   AGTGGGTATCAATTATATCATATGATGGAGGAAATAAAAATTACGCAGACTCCGTGAGGGGCCGATTCACCTTGTCCAGAGACAATTCCA  180
V  92.3% (229/248)  IGHV3-30*04  137  .......GG..G.................A.T......T.C................A.............A.C................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  F  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  E  S  G  Y  Y  E  
                    Query_9481   181  AGAACACGCTGTTTCTGCAAATGAACAACCTGCGCGCTGAGGACACGGCTGTGTATTACTGTGCGAGATCGGAAAGTGGTTATTATGAAG  270
V  92.3% (229/248)  IGHV3-30*04  227  ............A..............G....A.A.................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-22*01  17   --------------------------------------------------------------------------...........-----  27
J  88.0% (44/50)    IGHJ3*02     1    -------------------------------------------------------------------------------------...T.  5

                                      ---------->                                  
                                      A  F  D  M  W  G  P  G  T  V  V  T  V  A  S  
                    Query_9481   271  CTTTTGATATGTGGGGCCCAGGGACAGTGGTCACCGTCGCCTCAG  315
J  88.0% (44/50)    IGHJ3*02     6    ..........C.......A.......A...........T.T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_181868

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           300     9e-84
IGHD2-15*01                                                                                           18.0    0.61 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCCGGTAACTGCTA	GGGGCGGGGCCCCCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCCGGTAACTGCTAGGGGCGGGGCCCCCATTTTGACCAG	ARAICIAGNC*GRGPHFDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_9482   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAACCCCCAGGGAAGGGA  90
V  88.4% (221/250)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................G...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  D  G  V  G  N  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_9482   91   CTAGATGGGGTTGGGAATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGGGGTACCATATCACTTGACACGTCC  180
V  88.4% (221/250)  IGHV4-61*08  139  ..G..GT..A.....T.....T..T................C.................G.....A.TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  T  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N 
                    Query_9482   181  AGGACCCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGCAATTTGTATTGCCGGTAAC  270
V  88.4% (221/250)  IGHV4-61*08  229  .A..A..............A.....GC..........................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  81.0% (17/21)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G..GT....G.  22

                                      3-IMGT----------------------->                                  
                                       C  *  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9482   271  TGCTAGGGGCGGGGCCCCCATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  81.0% (17/21)    IGHD2-15*01  23   .....-----------------------------------------------------------  27
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_306240

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         369     2e-104
IGHD3-16*01                                                                                           12.2    31    
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCCGGGGTCC	TACCTTTGG	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGGGGTCCTACCTTTGGACTGGTTTAACCCC	ARAGVLPLDWFNP	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	111	3	0	97.4
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	241	5	0	98


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_9483     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGCTACTCCATCAGCAGTGGTTACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  98.0% (241/246)  IGHV4-38-2*01  49   .............................T............................................................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  N  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_9483     91   GAGTGGATTGGGAATATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAG  180
V  98.0% (241/246)  IGHV4-38-2*01  139  .............G............................................................................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                         N  H  F  S  L  T  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  V  L  P  L  D  W 
                    Query_9483     181  AACCACTTCTCCCTGACGCTGAACTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGCCGGGGTCCTACCTTTGGACTGG  270
V  98.0% (241/246)  IGHV4-38-2*01  229  .....G..........A.....G...........................................------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  88.9% (8/9)      IGHD3-16*01    11   ----------------------------------------------------------------------------...G.....-----  19
J  95.8% (46/48)    IGHJ5*02       4    -------------------------------------------------------------------------------------.....  8

                                        -------->                                  
                                         F  N  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9483     271  TTTAACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  95.8% (46/48)    IGHJ5*02       9    ..CG.......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_246798

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD3-16*02                                                                                           18.0    0.68  
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATGATAGTGGC	AGTTATCTTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGCAGTTATCTTTATTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_9484   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTACCAACTA  90
V  95.5% (278/291)  IGHV5-51*01  6    .................................................................G...........G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  D  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_9484   91   CTGGATCGACTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ........G...................................................................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  I  T  I  S  A  D  N  S  I  G  T  A  Y  L  Q  L  H  S  L  K  A  S  D  T  A
                    Query_9484   181  GTCCTTCGAAGGCCAAATCACCATCTCAGCCGACAACTCCATCGGCACCGCCTACCTGCAGTTGCACAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  .......C.......GG...................G......A..................G.AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_9484   271  CATGTATTACTGTGCGAGACATGGGGATGATAGTGGCAGTTATCTTTATTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD3-16*02  23   -------------------------------------.......G....-----------------------------------------  34
J  98.1% (53/54)    IGHJ6*02     9    -------------------------------------------------....A....................................  49

                                                   
                                        T  V  S  S 
                    Query_9484   361  CACCGTCTCCTCA  373
J  98.1% (53/54)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_177651

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           321     6e-90
IGHD2-21*02                                                                                           18.0    0.58 
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAGTCTGGGCCA	GGTGGTGAC	A	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGAGTCTGGGCCAGGTGGTGACATCGACGTC	ARHESGPGGDIDV	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	228	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  I  V  S  G  G  S  I  S  S  S  S  H  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9485   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGTTCCATCAGCAGTAGTTCTCACTACTGGGGCTGGATCCGCCAGCCCCCCGGGAAGGGG  90
V  90.8% (228/251)  IGHV4-39*01  49   ...................C............C...............AG.T............................A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  I  T  Y  H  N  T  S  L  K  S  R  V  A  M  S  V  D  T  S 
                    Query_9485   91   CTGGAGTGGATTGGCAGTATATATTATAGTGGGATCACCTACCACAACACGTCCCTCAAGAGTCGAGTCGCCATGTCTGTTGACACGTCC  180
V  90.8% (228/251)  IGHV4-39*01  139  ..............G.....C.............G.......T.....C....................A....A..C..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  L  L  S  L  N  L  D  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  E  S  G  P  G  G 
                    Query_9485   181  AAGAACTTGCTCTCCCTGAACCTGGACTCTGTGACCGCCGCAGACACGGCTGTATATTATTGTGCGAGACATGAGTCTGGGCCAGGTGGT  270
V  90.8% (228/251)  IGHV4-39*01  229  ......CA.T..........G...AG...........................G.....C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD2-21*02  11   ------------------------------------------------------------------------------------......  16

                                      ----------->                                  
                                       D  I  D  V  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9485   271  GACATCGACGTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (9/9)     IGHD2-21*02  17   ...-------------------------------------------  19
J  95.2% (40/42)    IGHJ5*02     10   ----.....CC...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_8974

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            335     4e-94
IGHD2-21*01                                                                                           10.3    114  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAA	ATTGC	CTTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATTGCCTTTTTTGACTTT	ARQIAFFDF	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9486   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACAACCTATTGGATGACGTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  93.1% (231/248)  IGHV3-7*01   47   ..........................................GT.G...........GC..............T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  K  E  D  G  S  E  K  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9486   91   AGTGGGTGGCCAGCATAAAGGAAGATGGAAGTGAGAAGCACTATGTAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.1% (231/248)  IGHV3-7*01   137  ............A.......C................AT.......G...........................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  V  F  L  Q  M  K  T  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  A  F  F  D  F  
                    Query_9486   181  AGAACTCTGTGTTTCTGCAAATGAAGACCCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGACAAATTGCCTTTTTTGACTTTT  270
V  93.1% (231/248)  IGHV3-7*01   227  .......AC...A............C.G..............................C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-21*01  18   -----------------------------------------------------------------------.....--------------  22
J  93.0% (40/43)    IGHJ4*02     6    --------------------------------------------------------------------------------.......AC.  15

                                                                       
                                      W  G  Q  G  T  L  V  A  V  S  S  
                    Query_9486   271  GGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  303
J  93.0% (40/43)    IGHJ4*02     16   ....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_173473

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           399     3e-113
IGHD3-22*01                                                                                           12.2    37    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACATTTCCTAAT	CTATGA	CAACAGAAATTACCGCCCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACATTTCCTAATCTATGACAACAGAAATTACCGCCCTCTTGACTAC	ARGHFLIYDNRNYRPLDY	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  R  Y 
                    Query_9487   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACAGCTTTTCCCGTTAT  91
V  94.1% (272/289)  IGHV1-18*01  7    .................................................................T..........C....A..A.C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  H 
                    Query_9487   92   GGTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCAGCGCTTACAATGGTAACACAAACTATGCACAT  181
V  94.1% (272/289)  IGHV1-18*01  97   ...A..............................................A......................................G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  E  D  R  V  T  M  T  T  D  T  S  T  T  T  A  Y  M  E  L  R  S  L  T  S  D  D  T  A 
                    Query_9487   182  AAATTCGAGGACAGAGTCACCATGACCACAGACACTTCCACGACCACAGCCTACATGGAACTGAGGAGCCTGACATCTGACGACACGGCC  271
V  94.1% (272/289)  IGHV1-18*01  187  ..GC..C...G........................A.......G...............G.............G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  G  H  F  L  I  Y  D  N  R  N  Y  R  P  L  D  Y  W  G  Q  G  T  L  L  T 
                    Query_9487   272  GTCTATTACTGTGCGAGAGGACATTTCCTAATCTATGACAACAGAAATTACCGCCCTCTTGACTACTGGGGCCAGGGAACCCTGCTCACC  361
V  94.1% (272/289)  IGHV1-18*01  277  ..G................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD3-22*01  7    --------------------------------......----------------------------------------------------  12
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------..........................G.....  38

                                                
                                       V  S  S  
                    Query_9487   362  GTCTCCTCAG  371
J  97.6% (41/42)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_173472

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           311     4e-87
IGHD5-12*01                                                                                           18.0    0.61 
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGCGATGTATGAT	TATAGTGGC	ACAATATAT	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGCGATGTATGATTATAGTGGCACAATATATTGGTACTTCGATCTC	ARQAMYDYSGTIYWYFDL	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	225	26	0	89.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  M  S  S  R  T  Y  P  W  A  W  V  R  Q  P  P  R  K  G 
                    Query_9488   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATGAGTAGTAGGACCTACCCCTGGGCCTGGGTCCGCCAGCCCCCACGGAAGGGC  90
V  89.6% (225/251)  IGHV4-39*01  49   ...............................G......C..C.....T.GT...TA.....G....A..............G.......G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  E  T  I  Y  N  T  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9488   91   CTGGAGTGGATTGAGACCATCTATAACACTGGGAGGACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCG  180
V  89.6% (225/251)  IGHV4-39*01  139  .............G..GT......T.T.G......C............................................A........C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       N  N  Q  F  S  L  H  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  A  M  Y  D  Y  S 
                    Query_9488   181  AACAACCAGTTCTCCCTGCACCTGAACTCTGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACAAGCGATGTATGATTATAGT  270
V  89.6% (225/251)  IGHV4-39*01  229  ..G...............A.G....G...........................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD5-12*01  6    ------------------------------------------------------------------------------------......  11

                                      -IMGT--------------------->                                  
                                       G  T  I  Y  W  Y  F  D  L  W  G  R  G  S  L  V  A  V  S  S  
                    Query_9488   271  GGCACAATATATTGGTACTTCGATCTCTGGGGCCGTGGCTCCCTGGTCGCTGTCTCCTCAG  331
D  100.0% (9/9)     IGHD5-12*01  12   ...----------------------------------------------------------  14
J  95.9% (47/49)    IGHJ2*01     5    ------------...........................A........A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_173471

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           357     1e-100
IGHD3-10*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAA	ATGGTTCGGG	ACTGGTGGGATAGTGAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAAATGGTTCGGGACTGGTGGGATAGTGAATTTGACTAC	AKDKMVRDWWDSEFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  I  W  V  R  Q  A  P  G  K  G  L  
                    Query_9489   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTTAGCAACTATGCCATGATCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-23*01  47   ............................T................G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  S  A  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9489   91   AGTGGGTCTCAGGTATTAGTGGTAGTGGTGGGAGCGCATATTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  95.6% (239/250)  IGHV3-23*01  137  ............C..................T...A....C............................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  A  D  T  A  V  Y  Y  C  A  K  D  K  M  V  R  D  W  
                    Query_9489   181  AAAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGCGGACACGGCCGTCTATTACTGTGCGAAAGATAAAATGGTTCGGGACTGGT  270
V  95.6% (239/250)  IGHV3-23*01  227  .G.....................................A............A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-10*01  9    --------------------------------------------------------------------------..........------  18

                                      T------------------>                                  
                                      W  D  S  E  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9489   271  GGGATAGTGAATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (43/43)   IGHJ4*02     6    -----------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_173470

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9490   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.9% (238/243)  IGHV4-59*01  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  P  S  K  N 
                    Query_9490   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACCCGTCCAAGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  ....................................................................A.........A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_9490   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  97.9% (238/243)  IGHV4-59*01  229  .............A.............................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_9490   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    ..............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_173477

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            339     2e-95
IGHD4-17*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAC	CTACGGTGACTAC	CTGGCAGGCCCCTGTAAGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACCTACGGTGACTACCTGGCAGGCCCCTGTAAGCTTGACTAC	ARTYGDYLAGPCKLDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  F  R  N  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9491   1    GGTCCCTGAGACTCTCCTGTGTAGGTTCTGGATTCACCTTTAGAAATTTTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  93.9% (232/247)  IGHV3-7*03   47   .....................C..CC.................T.GC.A....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  D  K  D  G  S  E  I  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9491   91   AGTGGGTGGCCAACATAGACAAAGATGGAAGTGAGATATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.9% (232/247)  IGHV3-7*03   137  .................A.GC...............A.....................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  S  L  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  T  Y  G  D  Y  L  A  
                    Query_9491   181  GGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTGTATTACTGTGCGAGGACCTACGGTGACTACCTGGCAG  270
V  93.9% (232/247)  IGHV3-7*03   227  A...........A...........................G..........................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (13/13)   IGHD4-17*01  4    ----------------------------------------------------------------------.............-------  16

                                      T------------------>                                  
                                      G  P  C  K  L  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9491   271  GCCCCTGTAAGCTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  324
J  97.6% (41/42)    IGHJ4*02     7    ------------....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_173476

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD2-21*01                                                                                           18.0    0.68  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	G	ATTGCGGTGGTG	TAGTGATGGAACTTGTTACTCTGGTTCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTAT	ARRLRWCSDGTCYSGSFEY	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  K  F  T  S  Y
                    Query_9492   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAAGTTTACCAGCTA  90
V  94.5% (274/290)  IGHV5-51*01  6    ..............................A........G.....................................GC...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  F  P  R  D  S  D  T  R  Y  N  P
                    Query_9492   91   TTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTCGTGACTCCGATACCAGATATAACCC  180
V  94.5% (274/290)  IGHV5-51*01  96   C......................T...........................G.......A....G.......T...........C.G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  D  Q  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  D  S  L  K  A  S  D  T  A
                    Query_9492   181  GTCCTTCCAAGACCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTACCTGCAGTGGGACAGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (274/290)  IGHV5-51*01  186  ...........G.......................A............................AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  R  L  R  W  C  S  D  G  T  C  Y  S  G  S  F  E  Y  W  G  Q  G  T  L  V
                    Query_9492   271  CATGTATTACTGTGCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTATTGGGGCCAGGGAACCCTGGT  360
V  94.5% (274/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD2-21*01  6    ---------------------....T.......---------------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------------------------.....C..C....................  34

                                                    
                                        T  V  S  S  
                    Query_9492   361  CACCGTCTCCTCAG  374
J  95.3% (41/43)    IGHJ4*02     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_173475

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           361     4e-102
IGHD4-17*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	GACTACGGTGACTAC	GGGGCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGACTACGGTGACTACGGGGCCCCTTGACTAC	ARGTTVTTGPLDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_9493   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCGTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-11*06  47   ......................................T...................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  S  S  T  G  D  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_9493   91   AGTGGGTTTCATTCATTAGTAGTACTGGTGATTACACAAACTACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAGCGCCA  180
V  96.4% (240/249)  IGHV3-11*06  137  ............A...........G.A..AG.................................A...................A.....  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  T  T  V  T  T  G  
                    Query_9493   181  AGAACTCACTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGACTACGGTGACTACGGGGC  270
V  96.4% (240/249)  IGHV3-11*06  227  ............A........................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD4-17*01  2    ----------------------------------------------------------------------...............-----  16

                                      ---------->                                
                                      P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9493   271  CCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  313
J  100.0% (40/40)   IGHJ4*02     7    ---........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_173474

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            382     4e-108
IGHD1-26*01                                                                                           14.1    9.0   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCG	GTGGGAG	TCACCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATGCGGTGGGAGTCACCCCCTACTTTGACTAC	ARDAVGVTPYFDY	273	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	158	27	26	1	0	96.3
FR3-IMGT	159	272	114	103	11	0	90.4
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	280	262	18	0	93.6


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  L  V  S  R  N  G  A  A  W  N  W  
                    Query_9494   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACATGTGCCATCTCCGGGGACCTTGTCTCTAGGAACGGTGCTGCTTGGAATTGGA  90
V  93.6% (262/280)  IGHV6-1*01   26   .....................................C..................AG.........C...A.............C....  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  L  R  
                    Query_9494   91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATATTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTCTGAGAG  180
V  93.6% (262/280)  IGHV6-1*01   116  ..............................................C....................................G...A.A  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      G  R  I  I  I  S  P  D  T  S  N  N  L  F  S  L  H  L  N  S  V  T  P  E  D  T  A  M  Y  Y  
                    Query_9494   181  GTCGAATAATCATCAGCCCAGACACTTCCAACAACCTCTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTATGTATTACT  270
V  93.6% (262/280)  IGHV6-1*01   206  .........C.....A.........A.....G....AG...........G..............................G.........  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><--------------CDR3-IMGT-------------->                                  
                                      C  A  R  D  A  V  G  V  T  P  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9494   271  GTGCAAGAGATGCGGTGGGAGTCACCCCCTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  345
V  93.6% (262/280)  IGHV6-1*01   296  ..........-----------------------------------------------------------------  305
                                      C  A  R                                                                    
D  100.0% (7/7)     IGHD1-26*01  7    --------------.......------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ----------------------------.........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_5226

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9495   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_9495   91   CTCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..G...............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G 
                    Query_9495   181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .........................G................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9495   271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_173479

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            310     1e-86
IGHD2-21*01                                                                                           12.2    31   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	TGGTGA	AGTATTCCTTGGATC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGGTGAAGTATTCCTTGGATCACTTTGACCAC	ARLVKYSLDHFDH	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  N  D  H  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9496   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATTACCAATGATCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.2% (222/246)  IGHV4-4*02   49   ..................GC...........G......C.G..G.AG.A.........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  R  S  G  S  T  T  Y  N  P  S  L  Q  S  R  V  A  F  S  V  D  K  S  K 
                    Query_9496   91   GAGTGGATTGGAGAAATCTATCGTAGTGGGAGCACCACTTACAACCCGTCCCTTCAGAGTCGAGTCGCCTTCTCAGTAGACAAGTCCAAG  180
V  90.2% (222/246)  IGHV4-4*02   139  ...........G..........A..............AC..............CA...........A..A.A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  F  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  V  K  Y  S  L  D  H 
                    Query_9496   181  AACCAGTTCTCCCTGAGTCTGAGATCTGTGACCGCCGCCGATACGGCCGTATATTACTGTGCGAGATTGGTGAAGTATTCCTTGGATCAC  270
V  90.2% (222/246)  IGHV4-4*02   229  ................AG.....C..............G..C........G...............------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-21*01  13   -------------------------------------------------------------------......-----------------  18
J  95.6% (43/45)    IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                                  
                                       F  D  H  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_9496   271  TTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  313
J  95.6% (43/45)    IGHJ4*02     6    ......T................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_173478

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD1-26*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTGTTTTC	TGGGACCTACTAC	CTTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTAC	ARVFSGTYYLLDY	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	70	4	0	94.6
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	110	4	0	96.5
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	279	14	0	95.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  T  A  F  G  Y  S  F  T  
                    Query_9497   3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTACGGCCTTTGGATACAGCTTTACCA  92
V  95.2% (279/293)  IGHV5-51*03  2    ..................................................................A..GT.C.................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  R  D  G  E  T  R  Y  
                    Query_9497   93   GTTATTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTCGTGACGGTGAAACCAGATACA  182
V  95.2% (279/293)  IGHV5-51*03  92   .C..C...............................................................G.....TC...T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  
                    Query_9497   183  GCCCGTCCTTCCAAGGCCAGGTCAGCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACC  272
V  95.2% (279/293)  IGHV5-51*03  182  ........................C....................................................A...........A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                
                                      P  A  M  Y  Y  C  A  R  V  F  S  G  T  Y  Y  L  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9497   273  CCGCCATGTATTATTGTGCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.2% (279/293)  IGHV5-51*03  272  .............C.........-----------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                  
D  92.3% (12/13)    IGHD1-26*01  8    -------------------------------.....G.......--------------------------------------------  20
J  100.0% (40/40)   IGHJ4*02     7    ------------------------------------------------........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_203853

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           350     8e-99
IGHD6-13*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGCAC	CAGCAGCTGGTAC	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCACCAGCAGCTGGTACTTTTGACTAC	ARGAPAAGTFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  A  N  Y  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_9498   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGCTAATTATTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*03  49   ..............................................G.GG...C.......G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  T  G  S  T  Y  Y  D  P  S  L  K  S  R  I  S  M  S  V  D  T  S 
                    Query_9498   91   CTGGAGTGGATTGGGTACATCTATTACACTGGGAGCACCTACTACGACCCTTCCCTCAAGAGTCGAATTTCCATGTCAGTAGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*03  139  ............................G................A....G...............G..A....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  P  A  A  G  T 
                    Query_9498   181  AAGAACCAGTTCTCCCTGAAGCTGACCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGGGGCACCAGCAGCTGGTACT  270
V  94.8% (237/250)  IGHV4-31*03  229  .........................G...........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD6-13*01  9    ----------------------------------------------------------------------------.............-  21

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9498   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (43/43)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_203852

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           394     7e-112
IGHD6-13*01                                                                                           21.8    0.045 
IGHJ4*01                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAGTG	GCAGCAGCTGG	CT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGCAGCAGCTGGCTACTACTTTGACTCC	ARGVAAAGYYFDS	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	270	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  I  K  K  P  G  E  S  L  K  I  S  C  R  G  S  G  Y  R  F  T  N  F
                    Query_9499   1    GCAGCTGGTGCAGTCTGGAGCAGAAATAAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGGGTTCTGGATACAGGTTTACCAACTT  90
V  93.8% (270/288)  IGHV5-51*03  6    ........................GG.G..................................A...............C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  M  I  Y  P  R  D  S  E  T  R  Y  S  P
                    Query_9499   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATGATCTATCCTCGTGACTCTGAGACCAGATACAGCCC  180
V  93.8% (270/288)  IGHV5-51*03  96   ...................................................G..C.........G..........T..............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  N  S  M  N  T  A  H  L  Q  W  S  S  L  R  A  S  D  T  A
                    Query_9499   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAACTCCATGAACACCGCCCACCTGCAGTGGAGCAGTCTGAGGGCCTCGGACACCGC  270
V  93.8% (270/288)  IGHV5-51*03  186  ....................................G.....C.G.......T................C....A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        I  Y  Y  C  A  R  G  V  A  A  A  G  Y  Y  F  D  S  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_9499   271  CATTTATTACTGTGCGAGGGGAGTGGCAGCAGCTGGCTACTACTTTGACTCCTGGGGCCAAGGTACCCTGGTCTCCGTCTCCTCAG  356
V  93.8% (270/288)  IGHV5-51*03  276  ...G..............--------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                       
D  100.0% (11/11)   IGHD6-13*01  8    -------------------------...........--------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*01     1    --------------------------------------............A............A.........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_203851

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           293     2e-81
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	215	28	0	88.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_9500   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAGT  93
V  88.5% (215/243)  IGHV4-59*01  50   .....TCC...A....C....................C...A..T.........GC....................G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N  
                    Query_9500   94   GGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAATC  183
V  88.5% (215/243)  IGHV4-59*01  140  .......G...A.........G.................A..C.......A.....................TA...A..........C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P  
                    Query_9500   184  AGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCCT  273
V  88.5% (215/243)  IGHV4-59*01  230  ..........G...C....C...........T............G.G....A...........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD7-27*01  4    ----------------------------------------------------------------........------------------  11
J  95.7% (44/46)    IGHJ5*02     6    -----------------------------------------------------------------------------.............  18

                                                                       
                                      W  G  Q  G  A  L  V  S  V  S  S  
                    Query_9500   274  GGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  306
J  95.7% (44/46)    IGHJ5*02     19   ...........A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_203850

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           408     4e-116
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_9501   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCCCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.2% (275/289)  IGHV5-51*03  6    .............................................T...............................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  T  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_9501   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCACCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.2% (275/289)  IGHV5-51*03  96   ........G.......................A.......................T...........A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_9501   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.2% (275/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9501   271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.2% (275/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_9501   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_5224

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           371     7e-105
IGHD3-10*01                                                                                           10.3    132   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCACACAGGG	CGGGG	GCGTCCAGTTCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCACACAGGGCGGGGGCGTCCAGTTCT	AAHRAGASSS	289	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	19	5	0	79.2
FR3-IMGT	175	288	114	99	15	0	86.8
CDR3-IMGT (germline)	289	291	3	3	0	0	100
Total	N/A	N/A	291	264	27	0	90.7


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_9502   1    CAGGTGCAGCTGGTGCAGTCTGGGGCTGAAGTGAAGAAACCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGGCACCTTCAGC  90
V  90.7% (264/291)  IGHV1-69*01  1    .............................G........G................................T..................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  V  M  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  L  S  G  R  A  H  Y 
                    Query_9502   91   AGCTATGTTATGAGTTGGGTTCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTCTCTCTGGAAGAGCGCACTAC  180
V  90.7% (264/291)  IGHV1-69*01  91   .......C...C..C.....G................................................A...T...T.C...AA.....  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  F  Q  G  R  G  T  I  S  T  D  E  S  T  S  T  V  H  M  E  L  S  G  L  T  S  E  D 
                    Query_9502   181  GCACAGAACTTCCAGGGCAGAGGCACGATTAGCACGGACGAATCCACGAGTACAGTCCACATGGAACTGAGCGGCCTGACTTCTGAGGAC  270
V  90.7% (264/291)  IGHV1-69*01  181  ........G.............T........C.G................C....C.T.......G......A......GA.........  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------CDR3-IMGT--------->                                  
                                       T  A  V  Y  F  C  A  A  H  R  A  G  A  S  S  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9502   271  ACAGCCGTCTATTTCTGTGCGGCACACAGGGCGGGGGCGTCCAGTTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  352
V  90.7% (264/291)  IGHV1-69*01  271  ..G.....G....A.......-------------------------------------------------------------  291
                                       T  A  V  Y  Y  C  A                                                              
D  100.0% (5/5)     IGHD3-10*01  15   -------------------------------.....----------------------------------------------  19
J  100.0% (34/34)   IGHJ4*02     15   ------------------------------------------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_203854

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           428     3e-122
IGHD2-2*02                                                                                            16.1    2.6   
IGHJ3*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-2*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAAGGAGT	TTGTAGTGATATGAGTTGCTATA	TTTGGGA	TGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAAGGAGTTTGTAGTGATATGAGTTGCTATATTTGGGATGACGCCTTTGATATT	ARDKGVCSDMSCYIWDDAFDI	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	282	8	0	97.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  I  Y 
                    Query_9503   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTAGCATCTAC  91
V  97.2% (282/290)  IGHV1-18*04  7    ..................................................................................C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_9503   92   GGTATCTCCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAACTATGCACAG  181
V  97.2% (282/290)  IGHV1-18*04  97   ......AG.....................................................C............................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_9503   182  AACCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  97.2% (282/290)  IGHV1-18*04  187  ..G.........................................................C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------------CDR3-IMGT-------------------------->               
                                       V  Y  Y  C  A  R  D  K  G  V  C  S  D  M  S  C  Y  I  W  D  D  A  F  D  I  W  G  Q  G  T 
                    Query_9503   272  GTGTACTACTGTGCGAGAGATAAAGGAGTTTGTAGTGATATGAGTTGCTATATTTGGGATGACGCCTTTGATATTTGGGGCCAAGGGACA  361
V  97.2% (282/290)  IGHV1-18*04  277  .....T..............----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  78.3% (18/23)    IGHD2-2*02   7    -----------------------------.......AG..CC..C.......--------------------------------------  29
J  94.0% (47/50)    IGHJ3*02     1    -----------------------------------------------------------...T..T........C...............  31

                                                         
                                       M  V  T  V  S  S  
                    Query_9503   362  ATGGTCACCGTCTCTTCAG  380
J  94.0% (47/50)    IGHJ3*02     32   ...................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_203859

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           408     4e-116
IGHD4-4*01                                                                                            14.1    9.8   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD4-4*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGACTC	GACTACA	CTATTTAGGAGAGATGTTAGAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGACTCGACTACACTATTTAGGAGAGATGTTAGATTTTGACTAC	ARGTRLHYLGEMLDFDY	292	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	106	8	0	93
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	277	16	0	94.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  V  S  L  Q  I  S  C  K  G  S  G  Y  S  F  A  
                    Query_9504   5    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGTGTCTCTGCAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGCCA  94
V  94.5% (277/293)  IGHV5-51*03  2    .............................................A.......A................................A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  E  I  R  Y  
                    Query_9504   95   ACTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGAAATCAGATACA  184
V  94.5% (277/293)  IGHV5-51*03  92   G...........G................................................C.................T.C........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  R  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  *  W  S  S  L  K  A  S  D  
                    Query_9504   185  GCCCGTCGTTCCAGGGCCGGGTCTCCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTGTAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  94.5% (277/293)  IGHV5-51*03  182  .......C.....A....A....A.........................C............C...........................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  V  Y  Y  C  A  R  G  T  R  L  H  Y  L  G  E  M  L  D  F  D  Y  W  G  Q  G  T  L  V  
                    Query_9504   275  CCGCCGTTTATTACTGTGCGAGAGGGACTCGACTACACTATTTAGGAGAGATGTTAGATTTTGACTACTGGGGCCAGGGAACCCTGGTCA  364
V  94.5% (277/293)  IGHV5-51*03  272  .....A.G...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD4-4*01   2    ------------------------------.......-----------------------------------------------------  8
J  100.0% (43/43)   IGHJ4*02     6    -----------------------------------------------------------...............................  36

                                                  
                                      T  V  S  S  
                    Query_9504   365  CCGTCTCCTCAG  376
J  100.0% (43/43)   IGHJ4*02     37   ............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_203858

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     2e-87
IGHD4-4*01                                                                                            18.0    0.62 
IGHJ3*01                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-4*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGAATGCGGGTGGATG	ACAGTAACT	CTTATTACTCCTGGAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGAATGCGGGTGGATGACAGTAACTCTTATTACTCCTGGAATGATGCTTTTGATGTC	AKDRMRVDDSNSYYSWNDAFDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  I  F  S  N  F  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9505   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCATCTTTAGCAACTTTGGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-23*01  47   ................................T...C........G..A..C.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  S  D  S  R  E  R  T  E  F  A  D  S  V  K  G  R  F  T  M  S  R  D  N  S  
                    Query_9505   91   AGTGGGTCGCGTTTATTAGTGATAGTCGTGAGCGCACAGAGTTCGCGGACTCCGTGAAGGGCCGGTTCACCATGTCCAGAGACAATTCCA  180
V  90.0% (225/250)  IGHV3-23*01  137  ........T.AGC........G....G...GTA.....T.C.A...A..........................C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      R  N  T  L  Y  L  Q  M  N  R  R  R  V  D  D  T  A  V  Y  Y  C  A  K  D  R  M  R  V  D  D  
                    Query_9505   181  GGAACACGCTGTATCTGCAAATGAACAGGCGGAGAGTCGACGACACGGCCGTATATTACTGTGCGAAAGATCGAATGCGGGTGGATGACA  270
V  90.0% (225/250)  IGHV3-23*01  227  A...........................C.T.....C...G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD4-4*01   6    ---------------------------------------------------------------------------------------...  8

                                      -CDR3-IMGT--------------------------->                                  
                                      S  N  S  Y  Y  S  W  N  D  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9505   271  GTAACTCTTATTACTCCTGGAATGATGCTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  342
D  100.0% (9/9)     IGHD4-4*01   9    ......------------------------------------------------------------------  14
J  100.0% (50/50)   IGHJ3*01     1    ----------------------..................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_24058

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            357     1e-100
IGHD1-1*01                                                                                            12.2    33    
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCAC	TACACAGACAACCTTTGGCA	ACAACT	TCTTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACTACACAGACAACCTTTGGCAACAACTTCTTTC	ALHRQPLATTSF	263	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	46	5	0	90.2
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	106	8	0	93
CDR3-IMGT (germline)	263	266	4	4	0	0	100
Total	N/A	N/A	266	247	19	0	92.9


Alignments

                                     <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  R  S  T  G  V  G  V  E  W  I  R
                    Query_9506  1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGCTTCTCACTCAGAAGTACTGGAGTGGGTGTAGAGTGGATCCG  90
V  92.9% (247/266)  IGHV2-5*01  30   ................................................G...........C.C..G............G.GC........  119
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                     -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  E  D  E  R  Y  S  P  S  L  K  N  R  L  T
                    Query_9506  91   TCAGCCCCCCGGAAAGGCCCTAGAGTGGCTTGCACTCATTTATTGGAATGAAGATGAGCGCTACAGCCCTTCTCTGAAGAACAGACTCAC  180
V  92.9% (247/266)  IGHV2-5*01  120  .........A...........G.............................T...A.............A..........G...G.....  209
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                     ---------------------FR3-IMGT----------------------------------------------------><-------
                                       I  T  K  D  T  S  R  N  Q  V  V  L  T  M  T  D  M  D  P  V  D  T  A  T  Y  F  C  A  L  H
                    Query_9506  181  CATCACCAAGGACACCTCCAGAAACCAGGTGGTCCTAACAATGACCGACATGGACCCTGTGGACACGGCCACATATTTCTGTGCACTACA  270
V  92.9% (247/266)  IGHV2-5*01  210  ....................A...............T.........A...................A..........A........----  295
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A      

                                     ------CDR3-IMGT------------>                                  
                                       R  Q  P  L  A  T  T  S  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9506  271  CAGACAACCTTTGGCAACAACTTCTTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  332
D  100.0% (6/6)     IGHD1-1*01  4    ----------------......----------------------------------------  9
J  100.0% (35/35)   IGHJ4*02    14   ---------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_97503

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            319     2e-89
IGHD6-13*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACCTGGTACTCGGGGTTTTGACTAC	ARHLGTPGTRGFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	21	3	3	77.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	246	227	16	3	92.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  C  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_9507   1    ACCCTGTCCCTCACCTGCGCTGTCTCTTGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  87
V  92.3% (227/246)  IGHV4-4*02   49   ...........................G...G.....T........GTA.......................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  S  Y  H  S  G  R  T  N  Y  N  A  S  F  Q  S  R  V  T  I  S  V  D  T  S  K 
                    Query_9507   88   GAGTGGATTGGGGAATCCTATCATAGTGGGCGCACCAACTACAACGCGTCCTTCCAGAGTCGAGTCACCATATCGGTAGACACGTCCAAG  177
V  92.3% (227/246)  IGHV4-4*02   139  ...............AT.............A..............C.....C..A...................A.......A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  P  G  T  R 
                    Query_9507   178  AATCAATTCTCCCTGAATCTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACCTGGTACTCGG  267
V  92.3% (227/246)  IGHV4-4*02   229  ..C..G...........G....G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9507   268  GGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (43/43)   IGHJ4*02     6    ---...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_139232

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           425     3e-121
IGHD1-26*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	GGG	GGTCTAGTGGAAGGTACTAC	CTCCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTAC	ARGGLVEGTTSFFDY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	71	0	0	100
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	112	2	0	98.2
CDR3-IMGT (germline)	289	294	6	5	1	0	83.3
Total	N/A	N/A	290	281	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  
                    Query_9508   5    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCAACCT  94
V  96.9% (281/290)  IGHV5-51*03  5    ...................................................................................A.C.G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  F  G  W  V  R  Q  I  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  
                    Query_9508   95   ACTGGTTCGGCTGGGTGCGCCAGATACCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCAGATACAGCC  184
V  96.9% (281/290)  IGHV5-51*03  95   .....A...................G..........................G.....................................  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_9508   185  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCG  274
V  96.9% (281/290)  IGHV5-51*03  185  .............................................G............................................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------CDR3-IMGT----------------->                               
                                      A  I  Y  Y  C  A  R  G  G  L  V  E  G  T  T  S  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_9508   275  CCATTTATTACTGTGCGCGAGGGGGTCTAGTGGAAGGTACTACCTCCTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCGT  364
V  96.9% (281/290)  IGHV5-51*03  275  ....G............A..----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  85.0% (17/20)    IGHD1-26*01  1    -----------------------...A......G..C......-----------------------------------------------  20
J  97.7% (43/44)    IGHJ4*02     5    -------------------------------------------------.......................................C.  45

                                         
                                      S  
                    Query_9508   365  CAG  367
J  97.7% (43/44)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_139231

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     2e-109
IGHD6-13*01                                                                                           19.9    0.18  
IGHJ1*01                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGAGTGGCCAC	AGCCGCAGCTGGT	GGACAT	CTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGAGTGGCCACAGCCGCAGCTGGTGGACATCTGAGTACTTCCAGGAG	ARMSGHSRSWWTSEYFQE	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  I  F  R  T  Y
                    Query_9509   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACATCTTTAGAACCTA  90
V  92.7% (268/289)  IGHV5-51*01  6    ....................C.............................A..........................G.....CC.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_9509   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  92.7% (268/289)  IGHV5-51*01  96   ........G.................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  K  G  Q  V  T  I  S  V  D  K  S  I  N  T  A  F  L  R  W  A  S  L  K  A  P  A  G  G
                    Query_9509   181  GTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAACACCGCCTTCCTGCGCTGGGCCAGCCTGAAGGCCCCGGCCGGCGG  270
V  92.7% (268/289)  IGHV5-51*01  186  .......C.....................C..............G........A.....AG...AG.............T...A.AC..C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  W  A  R  M  S  G  H  S  R  S  W  W  T  S  E  Y  F  Q  E  W  G  Q  G  T  L  V  S
                    Query_9509   271  CATGTATTACTGGGCGAGAATGAGTGGCCACAGCCGCAGCTGGTGGACATCTGAGTACTTCCAGGAGTGGGGCCAGGGCACCCTGGTCTC  360
V  92.7% (268/289)  IGHV5-51*01  276  ............T......-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  92.3% (12/13)    IGHD6-13*01  7    -------------------------------...A.........----------------------------------------------  19
J  90.2% (46/51)    IGHJ1*01     2    --------------------------------------------------....A.........C.C.....................A.  41

                                                 
                                        V  S  P  
                    Query_9509   361  CGTCTCCCCAG  371
J  90.2% (46/51)    IGHJ1*01     42   .......T...  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_97500

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGGCTAGC	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTAGCTCGACCCC	ARSGSGNYEG*LDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9510   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9510   91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  * 
                    Query_9510   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTAG  270
V  95.5% (231/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9510   271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (42/42)   IGHJ5*02     10   -..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_97507

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           360     1e-101
IGHD3-10*01                                                                                           10.3    123   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGACGGTTTAGCGATGGCCGTCCGA	CGGGG	N/A	CTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGACGGTTTAGCGATGGCCGTCCGACGGGGCTTTAATTAC	AKDDGLAMAVRRGFNY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9511   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGGTATGGCATGCATTGGGTCCGCCAGGCGCCAGGCAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-30*18  47   ..............................................C...........C..............T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  H  D  G  I  N  K  Y  Y  P  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9511   91   AGTGGGTGGCAGTTATATCACACGATGGAATTAATAAATACTATCCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (240/250)  IGHV3-30*18  137  ....................T.T.......G.............G.............................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  S  V  Y  Y  C  A  K  D  D  G  L  A  M  A  
                    Query_9511   181  AGAACACCCTGTATCTGCAAATGGACAGCCTGAGAGCTGAGGACACGTCTGTGTATTACTGTGCGAAAGATGACGGTTTAGCGATGGCCG  270
V  96.0% (240/250)  IGHV3-30*18  227  .......G...............A.......................G......................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      T------------------>                                  
                                      V  R  R  G  F  N  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9511   271  TCCGACGGGGCTTTAATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (5/5)     IGHD3-10*01  15   -----.....--------------------------------------------  19
J  95.5% (42/44)    IGHJ4*02     5    ----------....G.C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_147448

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           305     3e-85
IGHD1-26*01                                                                                           16.1    2.2  
IGHJ5*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	TTTCGGAACG	GTGGGAGC	CCTAGTAGAT	TGGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATTTCGGAACGGTGGGAGCCCTAGTAGATTGGATCGACTCC	ANFGTVGALVDWIDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	221	26	0	89.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  T  N  F  A  M  T  W  V  R  Q  P  P  G  K  G  L  
                    Query_9512   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTAACCTTTACCAACTTTGCCATGACCTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  89.5% (221/247)  IGHV3-23*01  47   ..................................C.......G..G..A........G.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  R  D  F  T  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9512   91   AGTGGGTCTCCTCTATTAGTGGCCGTGATTTTACGACACATTACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  89.5% (221/247)  IGHV3-23*01  137  ..........AG..........TA...G.GG..GC...T.C...........C.................................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  P  L  R  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  N  F  G  T  V  G  A  L  
                    Query_9512   181  AGAACACCCTACCTCTGCGAATGAACAGTCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAATTTCGGAACGGTGGGAGCCCTAG  270
V  89.5% (221/247)  IGHV3-23*01  227  .......G..GTA.....A.........C.......................A..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD1-26*01  7    -----------------------------------------------------------------------------........-----  14

                                      ---------------->                                  
                                      V  D  W  I  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9512   271  TAGATTGGATCGACTCCTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  321
J  93.5% (43/46)    IGHJ5*01     6    -----...T................A..A......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_183649

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           357     1e-100
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ2*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCC	TAGCAGCGGCTGGTAC	TTTAGCG	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCTAGCAGCGGCTGGTACTTTAGCGGGTACTTCGATCTC	ARDPSSGWYFSGYFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  S  M  N  W  V  R  Q  A  P  E  K  G  L  
                    Query_9513   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGGAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGAGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-21*01  47   .....................................C.....T..C...............................G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  G  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  A  
                    Query_9513   91   AGTGGGTCTCATCCATTAGTAGTAGTGGTTCTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAAAGACAACGCCA  180
V  95.6% (239/250)  IGHV3-21*01  137  ..........................A..AG...............................................G...........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  K  S  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  S  S  G  W  Y  
                    Query_9513   181  AGAAGTCACTGTATCTACAAATGGACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGACCCTAGCAGCGGCTGGTACT  270
V  95.6% (239/250)  IGHV3-21*01  227  ....C...........G......A..............................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.8% (15/16)    IGHD6-13*01  6    -------------------------------------------------------------------------.......A........-  21

                                      T------------------>                                  
                                      F  S  G  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9513   271  TTAGCGGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
J  100.0% (48/48)   IGHJ2*01     6    ------................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_97504

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           333     1e-93
IGHD3-3*01                                                                                            10.3    119  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATC	GAGTG	CCCTTCCAATTTG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCGAGTGCCCTTCCAATTTGACGGTATGGACGTC	ARNRVPFQFDGMDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  P  G  G  S  I  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9514   1    ACCCTGTCCCTCACCTGCACTGTCCCTGGTGGCTCCATCGGTTCTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.8% (228/243)  IGHV4-59*08  49   ........................T..............A..AG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  N  G  Y  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_9514   91   TGGATTGGCTATATGTATTACAATGGGTACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGTCCAAGAAC  180
V  93.8% (228/243)  IGHV4-59*08  139  ........G.....C.......G....AG.......................................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       L  F  S  L  M  L  T  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  N  R  V  P  F  Q  F  D  G 
                    Query_9514   181  CTGTTCTCCCTGATGCTGACCTCTGTGACCTCCGCAGACACGGCCGTGTATTACTGTGCGAGAAATCGAGTGCCCTTCCAATTTGACGGT  270
V  93.8% (228/243)  IGHV4-59*08  229  .A...........A.....G..........G................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-3*01   16   -------------------------------------------------------------------.....------------------  20
J  95.7% (45/47)    IGHJ6*02     16   -------------------------------------------------------------------------------------.....  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_9514   271  ATGGACGTCTGGGGCCAAGGGACGACGGTCAGCGTCTCCTCA  312
J  95.7% (45/47)    IGHJ6*02     21   .......................C.......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_147445

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD5-18*01                                                                                           21.8    0.042
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGAA	GTGGATACAACTTTGGT	CAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGAAGTGGATACAACTTTGGTCATAACTGGTTCGACCCC	ARDPTGSGYNFGHNWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  V  S  I  S  H  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_9515   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGTCTCCATAAGTCATTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAAT  93
V  91.8% (224/244)  IGHV4-59*01  50   .....TCC...A..................G......C...AG............C................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  T  S  V  D  T  T  K  N  
                    Query_9515   94   GGATTGGATATATCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCACGTCAGTAGACACGACCAAGAACC  183
V  91.8% (224/244)  IGHV4-59*01  140  .......G......T...................................................TA............T.........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  S  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F  
                    Query_9515   184  AGTTCTCCCTGAGCCTCAGTTCTGTGACCGTTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCCTACCGGAAGTGGATACAACTTTG  273
V  91.8% (224/244)  IGHV4-59*01  230  ............AG..G..C..........C.................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  88.2% (15/17)    IGHD5-18*01  1    ---------------------------------------------------------------------------.........G..A..  15

                                      ------------------->                                  
                                      G  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9515   274  GTCATAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTAACCGTCTCCTCAG  327
D  88.2% (15/17)    IGHD5-18*01  16   ..----------------------------------------------------  17
J  98.0% (48/49)    IGHJ5*02     3    -----...................................C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_147447

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           321     7e-90
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTCGGACCTC	TGATAGTAGTGGTTATT	TCAAGTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTCGGACCTCTGATAGTAGTGGTTATTTCAAGTGCTTTGACTAC	ARARTSDSSGYFKCFDY	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  L  S  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_9516   4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGATCCCTTAGTGGTTCCTACTGGAGCTGGATCCGCCAGCCCCCCGGGAAGGGGCTGGAGT  93
V  92.2% (224/243)  IGHV4-34*01  50   .....TCC...A...................G...T.C.......A...........................A................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  Q  S  V  G  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_9516   94   GGATTGGGGAAATCAATCAAAGTGTAGGCACCAAGTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  92.2% (224/243)  IGHV4-34*01  140  ...................T....G.A.......C.......................................................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  F  C  A  R  A  R  T  S  D  S  S  G  Y  
                    Query_9516   184  AGTTCTCCCTGAAGCTAACCTCTGTGACCGCCGCGGACACGGCTCTCTATTTTTGTGCGAGAGCTCGGACCTCTGATAGTAGTGGTTATT  273
V  92.2% (224/243)  IGHV4-34*01  230  ................G.G.........................G.G....AC..........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (17/17)   IGHD3-22*01  10   -------------------------------------------------------------------------.................  26

                                      ---------------->                                  
                                      F  K  C  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9516   274  TCAAGTGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (44/44)   IGHJ4*02     5    -------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_147446

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           344     6e-97
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTCC	TATGCTTA	CTGTTGAGGGAC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTCCTATGCTTACTGTTGAGGGACACTTTGACTAC	AREGPMLTVEGHFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9517   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTGACGTTCAGTAATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-48*03  47   ..................................C..C.......G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  K  I  S  S  S  G  G  T  V  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_9517   91   AGTGGGTTTCAAAGATTAGTAGTAGTGGCGGAACCGTGTACTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-48*03  137  ...........T.C..............TA.T...A.A...................A................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  G  P  M  L  T  V  
                    Query_9517   181  AGAACTCACTTTTTCTGCAAATGAACAACCTGCGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGAGGGTCCTATGCTTACTGTTG  270
V  94.0% (235/250)  IGHV3-48*03  227  ..........G.A..............G....A.....................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-16*01  26   ----------------------------------------------------------------------------........------  33

                                      ---------------->                                  
                                      E  G  H  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_9517   271  AGGGACACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.8% (44/45)    IGHJ4*02     4    ------..................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_183643

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           367     6e-104
IGHD3-3*01                                                                                            44.9    5e-09 
IGHJ5*02                                                                                              58.4    9e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCCA	TATTACGATTTTTGGAGTGGTTA	CCCAGGCCTCA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGATCCATATTACGATTTTTGGAGTGGTTACCCAGGCCTCACC	TTDPYYDFWSGYPGLT	248	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	28	27	1	0	96.4
CDR1-IMGT	29	52	24	23	1	0	95.8
FR2-IMGT	53	103	51	51	0	0	100
CDR2-IMGT	104	133	30	28	2	0	93.3
FR3-IMGT	134	247	114	108	6	0	94.7
CDR3-IMGT (germline)	248	255	8	8	0	0	100
Total	N/A	N/A	255	245	10	0	96.1


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E
                    Query_9518   1    GTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAATGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGA  90
V  96.1% (245/255)  IGHV3-15*01  48   ......T......................................C............................................  137
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E

                                      ------------><----------CDR2-IMGT---------><----------------------------------------------
                                        W  V  G  R  I  K  N  K  T  D  G  G  T  A  A  Y  A  A  P  V  K  G  R  F  T  I  S  K  D  D
                    Query_9518   91   GTGGGTTGGCCGTATTAAAAACAAAACTGATGGTGGGACAGCAGCCTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAAAGATGA  180
V  96.1% (245/255)  IGHV3-15*01  138  ....................G...................A...A......................................G......  227
                                        W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D

                                      ------FR3-IMGT----------------------------------------------------><-------------------CDR
                                        S  R  N  T  V  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  D  P  Y  Y  D  F
                    Query_9518   181  TTCAAGAAACACGGTCTATTTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATCCATATTACGATTT  270
V  96.1% (245/255)  IGHV3-15*01  228  .....A.......C.G...C.......................................................---------------  302
                                        S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                  
D  100.0% (23/23)   IGHD3-3*01   2    -------------------------------------------------------------------------------...........  12

                                      3-IMGT------------------>                                  
                                        W  S  G  Y  P  G  L  T  W  G  Q  G  I  L  V  T  V  S  A  
                    Query_9518   271  TTGGAGTGGTTACCCAGGCCTCACCTGGGGCCAGGGAATCCTGGTCACCGTCTCCGCAG  329
D  100.0% (23/23)   IGHD3-3*01   13   ............-----------------------------------------------  24
J  94.4% (34/36)    IGHJ5*02     16   -----------------------...............C................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_147440

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           37.2    1e-06 
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAG	TTACTTTGATAGTAGTGGTTAT	GCTCAGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTACTTTGATAGTAGTGGTTATGCTCAGGACGGTATGGACGTC	ARESYFDSSGYAQDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9519   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  S  I  S  S  S  S  N  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9519   91   ACTGGGTCTCATCCATTAGTAGTAGTAGTAATTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  .G............................G...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  R  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  S  Y  F  D  S  S  
                    Query_9519   181  AGAACTCACTGTATCTGCAAATGAACAGGCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAAAGTTACTTTGATAGTAGTG  270
V  98.4% (246/250)  IGHV3-21*01  227  ............................C.........................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.5% (21/22)    IGHD3-22*01  4    -------------------------------------------------------------------------.....A...........  20

                                      IMGT--------------------->                                 
                                      G  Y  A  Q  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9519   271  GTTATGCTCAGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  95.5% (21/22)    IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_183641

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9520   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_9520   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_9520   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_9520   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_147442

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           322     2e-90
IGHD5-12*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGGAGA	AGTGGCTAC	AAGACTTAGGGGGCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGAGAAGTGGCTACAAGACTTAGGGGGCCCTTTTGACTAC	ARREKWLQDLGGPFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  L  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9521   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCCTCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCCGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-39*01  49   ...............................G....A...........................................A........G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  L  I  G  N  F  Y  Y  G  G  S  T  Y  Y  N  P  S  L  K  G  R  A  A  I  S  V  D  T  S 
                    Query_9521   91   CTGGAGTTGATTGGAAATTTCTATTATGGTGGGAGCACCTACTATAACCCGTCCCTCAAGGGTCGAGCCGCCATTTCCGTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-39*01  139  .......G......G.G.A........A................C...............A......T.A....A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  V  T  S  V  T  A  A  D  R  A  V  Y  R  C  A  R  R  E  K  W  L  Q  D 
                    Query_9521   181  AAGAACCAATTCTCCCTGAAGGTGACCTCTGTGACCGCCGCAGACAGGGCTGTATATCGCTGTGCGAGACGGGAGAAGTGGCTACAAGAC  270
V  91.2% (228/250)  IGHV4-39*01  229  ........G............C...G....................C......G...TA...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD5-12*01  9    ----------------------------------------------------------------------------.........-----  17

                                      GT------------------>                                  
                                       L  G  G  P  F  D  Y  W  G  Q  G  I  L  V  T  I  S  S  
                    Query_9521   271  TTAGGGGGCCCTTTTGACTACTGGGGCCAGGGAATCCTGGTCACCATCTCCTCAG  325
J  95.3% (41/43)    IGHJ4*02     6    ------------......................C..........G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_12930

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_9522   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AGT.A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S 
                    Query_9522   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T.A....A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_9522   181  CAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ..............G.....C..................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9522   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_12933

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            382     4e-108
IGHD2-8*01                                                                                            25.7    0.003 
IGHJ3*02                                                                                              56.4    4e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD2-8*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAC	CGGCTTTCCACCACGTC	TTGTAGTCATGGTGTATGC	AACACTACGGACTCTGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACCGGCTTTCCACCACGTCTTGTAGTCATGGTGTATGCAACACTACGGACTCTGGTTTTGATATT	AHRLSTTSCSHGVCNTTDSGFDI	263	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	27	3	0	90
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	107	7	0	93.9
CDR3-IMGT (germline)	263	268	6	6	0	0	100
Total	N/A	N/A	268	256	12	0	95.5


Alignments

                                     <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  S  S  G  V  S  V  G  W  I  R
                    Query_9523  1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGTAGTAGTGGAGTGAGTGTGGGCTGGATCCG  90
V  95.5% (256/268)  IGHV2-5*01  30   ............................................................C.C..........G................  119
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                     -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                       Q  P  P  G  K  A  L  E  W  L  A  L  V  Y  W  Y  D  D  K  R  Y  S  P  S  L  K  S  R  L  T
                    Query_9523  91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCGTTTATTGGTATGATGATAAGCGCTACAGTCCATCTCTGAAGAGCAGGCTCAC  180
V  95.5% (256/268)  IGHV2-5*01  120  .....................................A........A...................C.......................  209
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                     ---------------------FR3-IMGT----------------------------------------------------><-------
                                       I  T  K  D  T  S  R  N  Q  V  V  L  K  M  T  S  M  D  P  V  D  T  A  T  Y  Y  C  A  H  R
                    Query_9523  181  CATCACCAAGGACACTTCCAGAAATCAGGTGGTCCTTAAAATGACCAGCATGGACCCTGTGGACACAGCCACTTATTACTGTGCACACCG  270
V  95.5% (256/268)  IGHV2-5*01  210  ...............C....A...C.............C........A........................A...............--  297
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                     ----------------------CDR3-IMGT----------------------------->                             
                                       L  S  T  T  S  C  S  H  G  V  C  N  T  T  D  S  G  F  D  I  W  G  Q  G  A  A  V  T  V  S
                    Query_9523  271  GCTTTCCACCACGTCTTGTAGTCATGGTGTATGCAACACTACGGACTCTGGTTTTGATATTTGGGGCCAAGGGGCAGCAGTCACCGTCTC  360
D  89.5% (17/19)    IGHD2-8*01  7    ---------------.....C.A...........--------------------------------------------------------  25
J  88.6% (39/44)    IGHJ3*02    7    ---------------------------------------------------.........C............A..ATG...........  45

                                          
                                       S  
                    Query_9523  361  TTCAG  365
J  88.6% (39/44)    IGHJ3*02    46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_12932

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           324     8e-91
IGHD2-2*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCGGAGGGTTT	TTGTAGCGGTACAAGCTGCT	CCG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCGGAGGGTTTTTGTAGCGGTACAAGCTGCTCCGACTTTGACTTC	ARSEGFCSGTSCSDFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9524   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGATTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (227/247)  IGHV3-48*03  47   ............................................AG............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  S  S  S  T  G  N  F  R  F  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_9524   91   AGTGGGTTTCATACAGTAGTAGTACTGGTAATTTTAGATTTTATGCCGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCG  180
V  91.9% (227/247)  IGHV3-48*03  137  ...............T........G.....G.ACC.T..AC..C..A........................A.................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  S  E  G  F  C  S  G  
                    Query_9524   181  AGAACTCTCTTTATCTACAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGGTCGGAGGGTTTTTGTAGCGGTA  270
V  91.9% (227/247)  IGHV3-48*03  227  .......A..G.....G...................C..............................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  85.0% (17/20)    IGHD2-2*01   7    -------------------------------------------------------------------------------......TA...  17

                                      GT-------------------->                                  
                                      T  S  C  S  D  F  D  F  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_9524   271  CAAGCTGCTCCGACTTTGACTTCTGGGGCCAGGGAACCCTGGTCAGCGTCTCCTCAG  327
D  85.0% (17/20)    IGHD2-2*01   18   .C.......------------------------------------------------  26
J  95.6% (43/45)    IGHJ4*02     4    ------------.........A.......................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_12935

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           300     8e-84
IGHD3-3*01                                                                                            29.5    2e-04
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTGATACAGTCTTT	CGATTTTTGGAGTGG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTGATACAGTCTTTCGATTTTTGGAGTGGCTACTTCGACTAC	AKDLIQSFDFWSGYFDY	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	123	24	19	5	0	79.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	232	212	20	0	91.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  Y  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_9525   14   GTGCAGCCTCTGGATTCACGTTCAGTTACTATGGCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATTT  103
V  91.4% (212/232)  IGHV3-30*18  65   ...................C......AG.........G..................................................A.  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  Y  D  G  V  N  D  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  D  K  N  K  V  F  L  
                    Query_9525   104  CATATGATGGAGTTAATGACCACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGACAAGAACAAGGTGTTTCTGC  193
V  91.4% (212/232)  IGHV3-30*18  155  ...........AG....A.AT...............................................TC........C.C...A.....  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------------CDR3-IMGT----------------
                                      Q  M  N  S  L  R  V  E  D  T  A  T  Y  Y  C  A  K  D  L  I  Q  S  F  D  F  W  S  G  Y  F  
                    Query_9525   194  AAATGAACAGCCTGAGAGTTGAGGACACAGCTACTTATTACTGTGCGAAAGATCTGATACAGTCTTTCGATTTTTGGAGTGGCTACTTCG  283
V  91.4% (212/232)  IGHV3-30*18  245  ..................C.........G...GTG.................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (15/15)   IGHD3-3*01   7    -------------------------------------------------------------------...............--------  21
J  95.7% (45/47)    IGHJ4*02     2    ----------------------------------------------------------------------------------......T.  9

                                      ---->                                  
                                      D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9525   284  ACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  322
J  95.7% (45/47)    IGHJ4*02     10   ............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_311059

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           336     1e-94
IGHD3-10*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCCGCCGC	TTCGGGGAGTT	GACGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCCGCCGCTTCGGGGAGTTGACGCTTGACTAC	ARDGRRFGELTLDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  S  V  S  T  N  Y  M  S  W  F  R  Q  A  P  G  K  G  L  
                    Query_9526   1    GGTCCCTGAGACTCTCCTGTGCAGTTTCTGGGTTCAGCGTCAGTACCAATTACATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-53*01  47   ........................CC..........C........G...C............G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  L  Y  S  G  G  V  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_9526   91   AGTGGGTCTCAGTTCTTTATAGTGGTGGTGTCACATTCTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.5% (231/247)  IGHV3-53*01  137  ..............A.......C......AG.....A.....................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  I  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  R  R  F  G  E  L  
                    Query_9526   181  ACACATTGTATCTTCAAATGAATATCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGAGATGGCCGCCGCTTCGGGGAGTTGA  270
V  93.5% (231/247)  IGHV3-53*01  227  ....GC................C.G..............................C...........-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD3-10*01  13   -----------------------------------------------------------------------------...........--  23

                                      ---------->                                  
                                      T  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9526   271  CGCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (42/42)   IGHJ4*02     7    ---..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_311058

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           360     1e-101
IGHD1-26*01                                                                                           21.8    0.044 
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GA	GGTGTAGTGGGAGC	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTAT	ARGGVVGAPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	260	30	0	89.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  Q  P  G  S  S  V  K  V  S  C  K  S  S  G  G  S  F  S  S  Y
                    Query_9527   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGCAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGAGTTCTGGAGGTAGTTTCAGCAGCTA  90
V  89.7% (260/290)  IGHV1-69*01  6    ..................G............A................................GC.........C.CC...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  M  P  L  F  G  I  P  T  Y  A  G
                    Query_9527   91   TGCTGTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGTATCATGCCTCTGTTTGGCATACCAACGTACGCAGG  180
V  89.7% (260/290)  IGHV1-69*01  96   ....A...............................................G.G.....C...A.C.....T.C.G...AC......CA  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  L  Q  R  R  V  T  I  T  A  D  A  S  T  R  T  A  Y  M  E  L  S  S  L  R  S  G  D  T  A
                    Query_9527   181  GAAGTTGCAGCGCAGAGTCACAATAACCGCGGACGCATCCACGAGGACAGCCTACATGGAGTTGAGCAGCCTGAGATCTGGGGACACGGC  270
V  89.7% (260/290)  IGHV1-69*01  186  ......C...G..........G..T..........A.........C...............C..................A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  V  V  G  A  P  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_9527   271  CATTTATTACTGTGCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTATTGGGGCCAGGGATCCCTGGTCACTGTTTCCTCAG  353
V  89.7% (260/290)  IGHV1-69*01  276  .G.G................---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  92.9% (13/14)    IGHD1-26*01  1    ----------------------...A..........-----------------------------------------------  14
J  90.9% (40/44)    IGHJ4*02     5    ---------------------------------------.........C............A..........C..C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_12939

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            343     2e-96
IGHD1-26*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	G	AGTGGGA	TGGCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGAGTGGGATGGCTCCCTGACTAC	VGGVGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  I  S  D  Y  W  M  N  W  V  P  Q  A  P  G  K  G  L  
                    Query_9528   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCATTAGTGACTATTGGATGAACTGGGTCCCCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-7*01   47   ....................................C.T.....AG...........G........G.......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  E  K  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9528   91   AGTGGGTGGCCAACATAGAGAAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (234/249)  IGHV3-7*01   137  .................A..C.................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  L  Y  Y  C  V  G  G  V  G  W  L  P  D  
                    Query_9528   181  AGAACTCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTCTGTATTACTGTGTGGGAGGAGTGGGATGGCTCCCTGACT  270
V  94.0% (234/249)  IGHV3-7*01   227  ...................A...A............C.............G............C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  6    ----------------------------------------------------------------------.......-------------  12
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9528   271  ACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   ..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_311056

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           402     3e-114
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              69.9    4e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTTGGAC	TACCAGCTGCTAT	TTCCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTTGGACTACCAGCTGCTATTTCCTCTTGACTCC	ARVLDYQLLFPLDS	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	71	4	0	94.7
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	276	19	0	93.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  P  S  Y  T  F  S 
                    Query_9529   3    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCCCTAGTTACACCTTTAGC  92
V  93.6% (276/295)  IGHV1-18*01  1    .....T.....G...........................................................TT..G............C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  A  F  Y  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  R  Y 
                    Query_9529   93   AGATATGCTTTCTACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAGGTAT  182
V  93.6% (276/295)  IGHV1-18*01  91   ..C....G.A..AG.....................................................C.................AC...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  Y  D  D 
                    Query_9529   183  GCACAGAATCTCCAGGGCAGAGTCACCATGACCACAGACACGTCCACGAGCACCGCCTACATGGAGCTGAGGAGCCTGAGATATGACGAC  272
V  93.6% (276/295)  IGHV1-18*01  181  ........G................................A...........A............................C.......  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  F  C  A  R  V  L  D  Y  Q  L  L  F  P  L  D  S  W  G  Q  G  T  L  V  T  V  S 
                    Query_9529   273  ACGGCCGTGTATTTCTGTGCGAGAGTTTTGGACTACCAGCTGCTATTTCCTCTTGACTCCTGGGGCCAGGGCACCCTGGTCACCGTCTCC  362
V  93.6% (276/295)  IGHV1-18*01  271  .............A...........-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (13/13)   IGHD2-2*01   16   ---------------------------------.............--------------------------------------------  28
J  95.2% (40/42)    IGHJ4*02     7    ----------------------------------------------------......A............A..................  44

                                          
                                       S  
                    Query_9529   363  TCAG  366
J  95.2% (40/42)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_311053

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           355     3e-100
IGHD2-15*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GGGAGGCTCG	TTGTAGTGGTGGTAGCTGCTAC	GGAGTTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGGGGAGGCTCGTTGTAGTGGTGGTAGCTGCTACGGAGTTTATGACTAC	TTGEARCSGGSCYGVYDY	245	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	10	1	0	90.9
CDR1-IMGT	26	49	24	24	0	0	100
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	130	30	30	0	0	100
FR3-IMGT	131	244	114	110	4	0	96.5
CDR3-IMGT (germline)	245	251	7	7	0	0	100
Total	N/A	N/A	237	232	5	0	97.9


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  
                    Query_9530   15   GTACAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTA  104
V  97.9% (232/237)  IGHV3-15*01  65   ..G.......................................................................................  154
                                         A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  

                                      -------CDR2-IMGT---------><----------------------------------------------------FR3-IMGT---
                                      K  S  K  T  D  G  G  T  T  N  Y  A  A  P  V  K  G  R  F  S  I  S  R  D  D  S  K  N  T  L  
                    Query_9530   105  AAAGCAAAACTGATGGTGGGACAACAAACTACGCTGCACCCGTGAAAGGCAGATTCAGCATCTCAAGAGATGATTCAAAGAACACGCTGT  194
V  97.9% (232/237)  IGHV3-15*01  155  ..........................G..............................C.....................A..........  244
                                      K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  

                                      -------------------------------------------------><----------------------CDR3-IMGT--------
                                      Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  G  E  A  R  C  S  G  G  S  C  Y  
                    Query_9530   195  ATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTTTATTACTGTACCACAGGGGAGGCTCGTTGTAGTGGTGGTAGCTGCTACG  284
V  97.9% (232/237)  IGHV3-15*01  245  ........................................G................---------------------------------  301
                                      Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                                   
D  100.0% (22/22)   IGHD2-15*01  7    -------------------------------------------------------------------......................-  28

                                      ------------->                                 
                                      G  V  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_9530   285  GAGTTTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  331
J  100.0% (40/40)   IGHJ4*02     8    -------........................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_24051

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           310     1e-86
IGHD3-9*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GCCATATTATAAAGATGATG	CTGGTTATTAT	TATGTC	GACAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGCCATATTATAAAGATGATGCTGGTTATTATTATGTCGACAAC	AKEPYYKDDAGYYYVDN	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  K  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9531   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAAGACTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  89.6% (224/250)  IGHV3-30*18  47   ........................................C.GT.GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  D  G  I  V  E  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_9531   91   AGTGGGTGGCGCTTATATCATATGATGGAATTGTTGAACATTATGCAGACTCCGTGAAGGGCCGATTCACCGTTTCCAGAGACAATTCGA  180
V  89.6% (224/250)  IGHV3-30*18  137  ..........AG..................G.AA.A..T.C..............................A.C..............C.  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  L  N  S  L  R  P  D  D  T  G  L  Y  F  C  A  K  E  P  Y  Y  K  D  D  
                    Query_9531   181  GGAACACGCTTTATCTTCAACTGAACAGCCTGAGACCTGACGACACGGGTCTATATTTCTGTGCGAAAGAGCCATATTATAAAGATGATG  270
V  89.6% (224/250)  IGHV3-30*18  227  A.........G.....G...A..............G....G.......C.G.G....A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      GT-------------------->                                  
                                      A  G  Y  Y  Y  V  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9531   271  CTGGTTATTATTATGTCGACAACTGGGGCCAGGGAACCCTGGTCACCGTGTCCTCAG  327
D  100.0% (11/11)   IGHD3-9*01   18   ...........----------------------------------------------  28
J  95.0% (38/40)    IGHJ4*02     9    -----------------...T............................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_311050

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           367     6e-104
IGHD2-8*01                                                                                            23.8    0.011 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GGGGC	TATTGTAATGATGGTATGTGCTACACC	CCCGT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGGGGCTATTGTAATGATGGTATGTGCTACACCCCCGTCTACTACTACTCCGGTATGGACGTC	AKGGYCNDGMCYTPVYYYSGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  P  
                    Query_9532   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTACTGGATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  97.2% (242/249)  IGHV3-74*01  47   .............................................G........................A................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9532   91   TGTGGGTCTCACGTATCAATAGTGATGGGAGTAGCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (242/249)  IGHV3-74*01  137  ................T......................G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  G  Y  C  N  D  G  
                    Query_9532   181  AGAACACCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAAAGGGGGCTATTGTAATGATGGTA  270
V  97.2% (242/249)  IGHV3-74*01  227  .......G..........................................................G..---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  81.5% (22/27)    IGHD2-8*01   5    --------------------------------------------------------------------------.......C.A.....G  20

                                      --CDR3-IMGT----------------------------->                                 
                                      M  C  Y  T  P  V  Y  Y  Y  S  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_9532   271  TGTGCTACACCCCCGTCTACTACTACTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  344
D  81.5% (22/27)    IGHD2-8*01   21   .A.....T...---------------------------------------------------------------  31
J  96.6% (56/58)    IGHJ6*02     5    ----------------...........A...................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_289964

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           338     5e-95
IGHD7-27*01                                                                                           19.9    0.17 
IGHJ3*01                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD7-27*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GG	CTAACTGGGG	TGGAAGGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCTAACTGGGGTGGAAGGGGCTTTTGATCTC	ARGLTGVEGAFDL	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	95	19	0	83.3
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	253	37	0	87.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  H  V  S  C  S  P  S  G  G  P  F  S  S  Y
                    Query_9533   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGCACGTCTCCTGCTCGCCTTCTGGAGGCCCCTTCAGCAGCTA  90
V  87.2% (253/290)  IGHV1-69*01  6    ..................G..............................A.G.........AA.G...........A.............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  F  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  M  P  N  L  Q  T  A  I  Y  A  Q
                    Query_9533   91   TGTTTTCACTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCATCATGCCTAACTTGCAAACAGCAATCTACGCCCA  180
V  87.2% (253/290)  IGHV1-69*01  96   ..C.A...GC............................................G.....C....T...TGGT.......A......A..  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  L  T  I  T  A  D  E  S  T  P  T  A  Y  M  K  L  T  S  L  K  S  D  D  T  A
                    Query_9533   181  GAAGTTCCAAGACAGACTTACCATTACCGCGGACGAATCTACGCCTACAGCCTACATGAAACTGACCAGCCTGAAATCTGACGACACGGC  270
V  87.2% (253/290)  IGHV1-69*01  186  .........G.G....G.C..G.................C...AGC............G.G....G........G......G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  F  C  A  R  G  L  T  G  V  E  G  A  F  D  L  W  G  Q  G  T  L  A  I  V  S  S  
                    Query_9533   271  CGTCTATTTTTGTGCGAGAGGGCTAACTGGGGTGGAAGGGGCTTTTGATCTCTGGGGCCAAGGAACGTTGGCCATCGTCTCTTCAG  356
V  87.2% (253/290)  IGHV1-69*01  276  ...G....AC..........------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD7-27*01  1    ----------------------..........------------------------------------------------------  10
J  87.0% (40/46)    IGHJ3*01     5    ----------------------------------------.........G.............G..AA...T..C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_289967

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD7-27*01                                                                                           12.2    36    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGGCCAACCGCCTGGGCGTTAAC	ACTGGG	AC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGCCAACCGCCTGGGCGTTAACACTGGGACCTACTTTGACTCC	ARRANRLGVNTGTYFDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  G  S  G  D  T  F  P  G  Y
                    Query_9534   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGAGACACCTTTCCCGGCTA  90
V  94.8% (275/290)  IGHV5-51*01  6    .............................A...........................................T...G....A..A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  F  P  G  D  S  D  T  K  Y  S  P
                    Query_9534   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAGGGCCTGGAGTGGATGGGGTTCATCTTTCCTGGTGACTCTGATACCAAATACAGCCC  180
V  94.8% (275/290)  IGHV5-51*01  96   .................................A..................A......A....................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  Q  G  Q  V  T  F  S  A  D  K  S  I  G  T  A  Y  L  Q  W  S  R  L  K  A  S  D  T  A
                    Query_9534   181  GGCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCGGCACCGCCTACCTGCAGTGGAGTAGGTTGAAGGCCTCGGACACCGC  270
V  94.8% (275/290)  IGHV5-51*01  186  .T....................A....................A......................C..CC...................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  R  A  N  R  L  G  V  N  T  G  T  Y  F  D  S  W  G  Q  G  T  L  V  S  V
                    Query_9534   271  CATGTATTACTGTGCGAGACGGGCCAACCGCCTGGGCGTTAACACTGGGACCTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCTCCGT  360
V  94.8% (275/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD7-27*01  4    -------------------------------------------......-----------------------------------------  9
J  95.7% (45/47)    IGHJ4*02     2    ---------------------------------------------------...........A......................A....  40

                                              
                                        S  S  
                    Query_9534   361  CTCCTCAG  368
J  95.7% (45/47)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_255183

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            310     1e-86
IGHD1-26*01                                                                                           10.3    117  
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACTTTCGCTTCGC	ACTAC	CTACATT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACTTTCGCTTCGCACTACCTACATTTGGACGTC	ARTFASHYLHLDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	102	12	0	89.5
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T  T  N  Q  W  W  T  W  V  R  Q  P  P  G  R  G  L 
                    Query_9535   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCACTAATCAGTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAGGGGGCTG  90
V  90.2% (222/246)  IGHV4-4*01   49   ........................................G..G..G.A.C.......G.......................A.......  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  F  P  N  G  N  T  N  Y  S  P  S  L  K  S  R  L  T  I  S  M  A  K  S  K 
                    Query_9535   91   GAGTGGATTGGGGAAATTTTTCCTAATGGGAACACCAACTACAGCCCGTCCCTCAAGAGTCGACTCACCATTTCAATGGCTAAGTCCAAG  180
V  90.2% (222/246)  IGHV4-4*01   139  .................C.A..A..G.....G...........A...................G.......A...G.A.AC.........  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  V  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  T  F  A  S  H  Y  L  H 
                    Query_9535   181  AACCAGGTCTCCCTGAAACTTAACTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAACTTTCGCTTCGCACTACCTACAT  270
V  90.2% (222/246)  IGHV4-4*01   229  ......T..........G..G.G................................G..........------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (5/5)     IGHD1-26*01  16   -------------------------------------------------------------------------------.....------  20

                                      -------->                              
                                       L  D  V  W  G  Q  G  T  T  V  S  V  S 
                    Query_9535   271  TTGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCC  309
J  97.4% (37/38)    IGHJ6*02     22   -..............................C.......  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_289961

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            346     2e-97
IGHD1-26*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	G	AGTGGGA	TGGCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGAGTGGGATGGCTCCCTGACTAC	VGGVGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  I  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9536   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCATTAGTGACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-7*01   47   ....................................C.T.....AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  E  K  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9536   91   AGTGGGTGGCCAACATAGAGAAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-7*01   137  .................A..C.................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  L  Y  Y  C  V  G  G  V  G  W  L  P  D  
                    Query_9536   181  AGAACTCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTCTGTATTACTGTGTGGGAGGAGTGGGATGGCTCCCTGACT  270
V  94.4% (235/249)  IGHV3-7*01   227  ...................A...A............C.............G............C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  6    ----------------------------------------------------------------------.......-------------  12
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9536   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_289960

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            364     5e-103
IGHD6-6*01                                                                                            19.9    0.16  
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-6*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	GGCTATTT	TAGGAGCTCGTCC	TGGGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATGGCTATTTTAGGAGCTCGTCCTGGGGCTGGTTCGACCCC	AKDGYFRSSSWGWFDP	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	251	9	9	0	0	100
Total	N/A	N/A	251	242	9	0	96.4


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9537  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.4% (242/251)  IGHV3-9*01  47   ..........................................................................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  S  Y  I  S  W  N  S  G  S  I  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  T  
                    Query_9537  91   AGTGGGTCTCTTATATTAGTTGGAATAGTGGTAGTATAGACTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACGACACCA  180
V  96.4% (242/251)  IGHV3-9*01  137  ..........AGG.....................C....G...........................................A..G...  226
                                     E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  F  C  A  K  D  G  Y  F  R  S  S  
                    Query_9537  181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGACCTGAGGACACGGCCTTGTATTTCTGTGCAAAAGATGGCTATTTTAGGAGCTCGT  270
V  96.4% (242/251)  IGHV3-9*01  227  ...................................G.....................A.............-------------------  297
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  92.3% (12/13)    IGHD6-6*01  6    -------------------------------------------------------------------------------...C.......  16

                                     T------------------>                                  
                                     S  W  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9537  271  CCTGGGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  92.3% (12/13)    IGHD6-6*01  17   ..----------------------------------------------------  18
J  100.0% (47/47)   IGHJ5*02    5    -------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_289963

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           294     6e-82
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTATTACGGTATGGACGTC	AREAYSYYGMDV	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	216	28	0	88.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  A  N  H  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_9538   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCGCTAATCACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  88.5% (216/244)  IGHV4-59*01  50   .....TCC...A....C.....................AG..G.T.........G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  I  S  H  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  T  A  D  K  S  K  N  
                    Query_9538   94   GGATTGCCTATATCTCTCACAGTGGGGGCACCAATTACAACCGCTCCCTCAAGAGTCGAGTCACCATAACAGCGGACAAGTCCAAGAACC  183
V  88.5% (216/244)  IGHV4-59*01  140  ......GG.......A.T........A.......C.......C.........................T...TA....C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D  
                    Query_9538   184  AGTTTTCCCTGAAGGTGAGATCTGTGACCGCCGCGGACACGGCCGTATATTATTGTGCCAGAGAGGCCTACTCTTATTACGGTATGGACG  273
V  88.5% (216/244)  IGHV4-59*01  230  ....C.........C....C...........T..............G.....C.....G.....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  91.4% (53/58)    IGHJ6*02     5    -------------------------------------------------------------------.....AC..C.............  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_9538   274  TCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  308
J  91.4% (53/58)    IGHJ6*02     28   ..........A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_139481

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     1e-124
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_9539   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  98.3% (284/289)  IGHV5-51*01  6    .............................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_9539   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9539   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9539   271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_9539   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_289969

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           339     2e-95
IGHD1-1*01                                                                                            10.3    123  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTTGTCCGGCGACTCCCTTCC	GTACA	TAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTGTCCGGCGACTCCCTTCCGTACATACACTGGTTCGACCCC	ARHLSGDSLPYIHWFDP	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	234	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  A  N  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_9540   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACCAGTGCTAATTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGC  90
V  93.2% (234/251)  IGHV4-39*01  49   ........................................G....AG..G.........................C.............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  Y  R  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9540   91   CTGGAGTGGATTGGGACTATCTATTATCGTGGGAGTACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCCGTAGACACGTCC  180
V  93.2% (234/251)  IGHV4-39*01  139  ................G..........A.......C......................................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       N  N  Q  F  S  L  K  L  S  P  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  S  G  D  S  L 
                    Query_9540   181  AACAACCAATTTTCCCTGAAGCTGAGCCCTGTGACCGCCGCAGACACGGCTGTCTACTATTGTGCGAGACATTTGTCCGGCGACTCCCTT  270
V  93.2% (234/251)  IGHV4-39*01  229  ..G.....G..C...............T.........................G..T..C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      MGT-------------------->                                  
                                       P  Y  I  H  W  F  D  P  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_9540   271  CCGTACATACACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  328
D  100.0% (5/5)     IGHD1-1*01   2    --.....---------------------------------------------------  6
J  97.9% (47/48)    IGHJ5*02     4    ----------...................................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_289968

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           349     2e-98
IGHD2-21*01                                                                                           14.1    8.4  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGGCGATTTTGGGTC	CTATTCC	CC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGGCGATTTTGGGTCCTATTCCCCTATGGACGTC	ARVGDFGSYSPMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  I  N  Y  N  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9541   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCATTAACTATAACATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-21*01  47   ..........................................G..G.....G......C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  S  G  T  Y  I  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9541   91   AGTGGGTCTCATCCATTAGTGATAGTGGTACTTACATATATTACTCAGACTCGGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (236/249)  IGHV3-21*01  137  ....................AG....A...G.........C...G.......A.....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  V  G  D  F  G  S  Y  
                    Query_9541   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCTGTATATTACTGTGCGAGAGTGGGCGATTTTGGGTCCTATT  270
V  94.8% (236/249)  IGHV3-21*01  227  ....................................C...............G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-21*01  22   -------------------------------------------------------------------------------------.....  26

                                      ------------->                                 
                                      S  P  M  D  V  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_9541   271  CCCCTATGGACGTCTGGGGCCAAGGGACCGCGGTCACCGTCTCCTCA  317
D  100.0% (7/7)     IGHD2-21*01  27   ..---------------------------------------------  28
J  97.7% (42/43)    IGHJ6*02     20   ----.........................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_209280

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           311     4e-87
IGHD3-10*02                                                                                           14.1    8.1  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTGGGTGGAATTA	ACTATGT	CTAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTGGGTGGAATTAACTATGTCTACGACTAC	AKDVGGINYVYDY	239	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	19	5	0	79.2
FR2-IMGT	50	100	51	48	3	0	94.1
CDR2-IMGT	101	124	24	21	3	0	87.5
FR3-IMGT	125	238	114	108	6	0	94.7
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	233	216	17	0	92.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  R  G  P  E  W  V  S  T  I 
                    Query_9542   14   TGTGCAGCCTCTGGATTCACCTTCAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAGGGGGCCGGAGTGGGTCTCAACTATC  103
V  92.7% (216/233)  IGHV3-23*01  64   .......................T..C......GCC............................A.....T.............G....T  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  T  G  G  R  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  S  D  N  S  K  N  T  L  F  L 
                    Query_9542   104  AGTGGTACTGGTGGTAGAACATACTACGCAGACTCCGTGAAAGGCCGGTTCACCATCTCCAGCGACAACTCCAAGAACACACTGTTTCTG  193
V  92.7% (216/233)  IGHV3-23*01  154  .......G.........C.......................G....................A.....T...........G....A....  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------CDR3-IMGT-------------->      
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  V  G  G  I  N  Y  V  Y  D  Y  W  G 
                    Query_9542   194  CAAATGAACAGCCTCAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATGTGGGTGGAATTAACTATGTCTACGACTACTGGGGC  283
V  92.7% (216/233)  IGHV3-23*01  244  ..............G......................................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (7/7)     IGHD3-10*02  6    -------------------------------------------------------------------.......----------------  12
J  97.5% (39/40)    IGHJ4*02     9    ------------------------------------------------------------------------------............  20

                                                                  
                                       Q  G  S  L  V  T  V  S  S  
                    Query_9542   284  CAGGGATCCCTGGTCACCGTCTCCTCAG  311
J  97.5% (39/40)    IGHJ4*02     21   ......A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_209281

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           349     3e-98
IGHD3-16*01                                                                                           18.0    0.65 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	283	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	69	5	0	93.2
CDR1-IMGT	76	99	24	17	7	0	70.8
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	282	114	95	13	6	83.3
CDR3-IMGT (germline)	283	288	6	6	0	0	100
Total	N/A	N/A	293	260	27	6	88.7


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P  
                    Query_9543   2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCC  91
V  88.7% (260/293)  IGHV5-51*03  2    ....G.....G................................................T.....A....T..........GC..TA..A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      R  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  
                    Query_9543   92   GTTATTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACA  181
V  88.7% (260/293)  IGHV5-51*03  92   .C..C........C.......................................................G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D  
                    Query_9543   182  GTCCGGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACA  265
V  88.7% (260/293)  IGHV5-51*03  182  .C...T.....C.A...................C...C........CAGCACC.C...............C..C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S  
                    Query_9543   266  CTGCCATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCTT  355
V  88.7% (260/293)  IGHV5-51*03  272  .C.....G........T......-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  91.7% (11/12)    IGHD3-16*01  18   ------------------------........T...------------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    -------------------------------------------......T......G.................A...............  47

                                         
                                      S  
                    Query_9543   356  CAG  358
J  94.0% (47/50)    IGHJ3*01     48   ...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_209282

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     2e-91
IGHD3-16*01                                                                                           10.3    114  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GCAGAG	ATGAT	N/A	TACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCAGAGATGATTACCTTGACTCC	ASRDDYLDS	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  S  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9544   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTCTGCCATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.3% (227/246)  IGHV3-23*01  47   ................................................A........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  N  G  R  G  S  R  T  D  Y  A  Y  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9544   91   AGTGGGTCTCCAGTGTTAATGGTAGGGGTTCTAGGACGGACTACGCATACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.3% (227/246)  IGHV3-23*01  137  ..........AGC.A...G......T...GG...C..AT........G..........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  T  L  Y  L  E  M  S  S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  R  D  D  Y  L  D  S  
                    Query_9544   181  AGAACACGCTGTATCTGGAAATGAGCAGCCTGAGAGTCGAGGACACGGCCGTATATTATTGTGCGAGCAGAGATGATTACCTTGACTCCT  270
V  92.3% (227/246)  IGHV3-23*01  227  .................C......A...........C.....................C.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD3-16*01  6    ------------------------------------------------------------------------.....-------------  10
J  93.5% (43/46)    IGHJ4*02     3    -----------------------------------------------------------------------------...T......A..  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9544   271  GGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  303
J  93.5% (43/46)    IGHJ4*02     16   ............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_209283

Length=316
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           321     6e-90
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	N/A	N/A	GGCAGGTCCTTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGCAGGTCCTTTT	ARAGPF	243	260	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  I  L  S  C  A  V  S  G  F  S  F  S  S  T  L  M  H  W  F  R  Q  A  P  G  K  G  L  
                    Query_9545   1    GGTCCCTGATACTCTCCTGTGCAGTCTCAGGATTCAGCTTCAGTAGCACTTTGATGCACTGGTTCCGCCAAGCTCCAGGGAAGGGACTGG  90
V  91.5% (226/247)  IGHV3-74*01  47   .........G..............C...T.......C..........TAC.G..........G......................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  A  R  I  E  S  D  G  S  T  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9545   91   TGTGGGTCGCACGCATAGAAAGTGATGGCAGTACCACAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.5% (226/247)  IGHV3-74*01  137  ........T....T..TA.T........G....G.....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----CDR3-IMGT--->          
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  A  G  P  F  W  G  Q  
                    Query_9545   181  AGAACACGCTGTATCTGCAGATGAACAGTCTGAGAGGCGAGGACACGGCTGTATATTACTGTGCAAGGGCAGGTCCTTTTTGGGGCCAGG  270
V  91.5% (226/247)  IGHV3-74*01  227  ...................A................C...............G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  100.0% (32/32)   IGHJ4*02     15   --------------------------------------------------------------------------------..........  24

                                                            
                                      G  T  L  V  T  V  S  S
                    Query_9545   271  GAACCCTGGTCACCGTCTCCTC  292
J  100.0% (32/32)   IGHJ4*02     25   ......................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30515799


Query= Query_209284

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           283     1e-78
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCAGC	ATACATCTCTGGT	CACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAGCATACATCTCTGGTCACCCCTAC	SAYISGHPY	240	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	102	12	0	89.5
Total	N/A	N/A	239	210	29	0	87.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  V  S  V  H  Y  M  S  W  V  R  Q  A  P  G  R  G  L  
                    Query_9546   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCGTCAGTGTACACTACATGAGCTGGGTCCGCCAGGCTCCGGGGAGGGGACTGG  90
V  87.9% (210/239)  IGHV3-53*01  47   ...............................G...A........AGCA............................A....A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  L  T  S  G  K  T  Y  Y  T  D  S  A  M  G  R  F  T  I  S  R  D  S  S  K  
                    Query_9546   91   AGTGGGTCTCAGCGATTCTTACCAGTGGTAAGACATACTACACAGACTCCGCGATGGGCCGATTCACCATCTCCAGAGACTCTTCCAAGA  180
V  87.9% (210/239)  IGHV3-53*01  137  ............TT...TA..G.G......GC.........G.........T..A.........................AA........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->    
                                      N  T  V  N  L  Q  M  N  S  L  S  A  G  D  T  A  F  Y  Y  C  S  A  Y  I  S  G  H  P  Y  W  
                    Query_9546   181  ACACAGTGAATCTTCAAATGAACAGCCTGAGCGCCGGGGACACGGCCTTCTATTACTGTTCAGCATACATCTCTGGTCACCCCTACTGGG  270
V  87.9% (210/239)  IGHV3-53*01  227  ....GC..T......................A....A..........G.G.........-------------------------------  285
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                                
D  84.6% (11/13)    IGHD5-18*01  5    ----------------------------------------------------------------.....G..A....-------------  17
J  100.0% (38/38)   IGHJ4*02     11   ----------------------------------------------------------------------------------........  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_9546   271  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  300
J  100.0% (38/38)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_209286

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           294     6e-82
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACG	TACGGTGAC	CCTACACTCCCATC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACGTACGGTGACCCTACACTCCCATCCTTTGACTCT	ARTYGDPTLPSFDS	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  M  S  S  G  G  Y  L  W  S  W  I  R  Q  N  P  G  K  G 
                    Query_9547   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCTATGAGCAGTGGCGGCTATCTCTGGAGCTGGATCCGCCAAAACCCAGGGAAGGGC  90
V  87.9% (218/248)  IGHV4-31*03  49   ...............................G...C..C........T..T..CTA..................GC..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  T  S  Y  Y  S  P  S  L  K  R  R  L  T  I  S  V  G  T  S 
                    Query_9547   91   CTGGAGTGGATTGGGAGCATCTATTACAGTGGAACCTCCTACTACAGCCCGTCCCTCAAGAGGCGACTTACAATATCAGTAGGCACTTCT  180
V  87.9% (218/248)  IGHV4-31*03  139  ...............TA...............G.G.A.........A...............T...G....C..........A...G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       E  K  H  F  S  L  K  L  T  S  M  T  A  A  D  T  A  I  Y  F  C  A  R  T  Y  G  D  P  T  L 
                    Query_9547   181  GAGAAGCACTTCTCCCTGAAGCTGACCTCTATGACTGCCGCGGACACGGCCATATATTTTTGTGCGAGGACGTACGGTGACCCTACACTC  270
V  87.9% (218/248)  IGHV4-31*03  229  A....C..G................G....G....................G.G....AC........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (9/9)     IGHD4-17*01  5    ------------------------------------------------------------------------.........---------  13

                                      -------------->                                  
                                       P  S  F  D  S  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_9547   271  CCATCCTTTGACTCTTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  319
J  93.2% (41/44)    IGHJ4*02     5    -----........AC.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_209288

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           341     5e-96
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGTCGTC	ATTACGATTTTTGGAGTGGTT	TTGACGCCACGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGTCGTCATTACGATTTTTGGAGTGGTTTTGACGCCACGTACTACTTTGACTTC	ARGRHYDFWSGFDATYYFDF	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	27	25	25	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	240	229	11	0	95.4


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  H  F  W  S  W  I  R  Q  P  P  G  K  G  L  E  W
                    Query_9548   3    CCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTCACTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTG  92
V  95.4% (229/240)  IGHV4-59*08  51   ...........................................T...A..........................................  140
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W

                                      ---------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IM
                                        I  G  Y  I  D  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S  H
                    Query_9548   93   GATTGGGTATATCGACTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAGAGCCA  182
V  95.4% (229/240)  IGHV4-59*08  141  .............T.T...............A..................................A...................A...  230
                                        I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q

                                      GT----------------------------------------------------><-------------------------CDR3-IMGT
                                        F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  H  Y  D  F  W  S  G  F
                    Query_9548   183  CTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTTTATTACTGTGCGAGGGGTCGTCATTACGATTTTTGGAGTGGTTT  272
V  95.4% (229/240)  IGHV4-59*08  231  G...........G....G...........................G..............------------------------------  290
                                        F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                 
D  100.0% (21/21)   IGHD3-3*01   3    --------------------------------------------------------------------.....................-  23

                                      ------------------------>                                  
                                        D  A  T  Y  Y  F  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9548   273  TGACGCCACGTACTACTTTGACTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  331
J  95.8% (46/48)    IGHJ4*02     1    -----------............A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_209289

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            385     4e-109
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	248	2	0	99.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9549   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.2% (248/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_9549   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  99.2% (248/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_9549   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  99.2% (248/250)  IGHV3-7*01   227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9549   271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_86234

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           339     2e-95
IGHD2-21*02                                                                                           16.1    2.3  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCACAAGTTGACGG	TGTGGCAGTGACTG	GCGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCACAAGTTGACGGTGTGGCAGTGACTGGCGGGTGGTTCGACCCC	ARSQVDGVAVTGGWFDP	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_9550   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  93.6% (233/249)  IGHV4-61*08  49   ..................A.................G.........................C........G.................A  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  R  I  Y  Y  N  G  R  T  Y  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S 
                    Query_9550   91   CTGGAGTGGATTGGGCGCATCTATTACAATGGGAGGACCTATTACAACCCCTCCCTCAAGGGTCGAGTCACCATATCAGTGGACACGTCC  180
V  93.6% (233/249)  IGHV4-61*08  139  ...............TAT..........G......C...A.C..................A...................A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  S  Q  V  D  G  V  A 
                    Query_9550   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCATCTATTACTGTGCGAGATCACAAGTTGACGGTGTGGCA  270
V  93.6% (233/249)  IGHV4-61*08  229  ...................................................G.G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  85.7% (12/14)    IGHD2-21*02  8    -----------------------------------------------------------------------------------.....TG  14

                                      MGT-------------------->                                  
                                       V  T  G  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9550   271  GTGACTGGCGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  85.7% (12/14)    IGHD2-21*02  15   .......---------------------------------------------------  21
J  100.0% (46/46)   IGHJ5*02     6    ------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_139485

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD5-12*01                                                                                           14.1    8.6  
IGHJ1*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	CTTAGACTCCCGTGT	TGGCTAC	CATCGC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGACTTAGACTCCCGTGTTGGCTACCATCGCGCTGATTACCTCCACCAC	AKDLDSRVGYHRADYLHH	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  M  F  D  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9551   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCATGTTTGACAACTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-23*01  47   .....................C..............CC...AG..G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  V  S  G  G  G  F  S  S  Y  Y  A  D  S  V  R  G  R  F  T  A  S  R  D  S  S  
                    Query_9551   91   AGTGGGTCTCAGGTGTTAGTGGGGGTGGTTTTAGTTCATACTACGCAGACTCCGTGAGGGGCCGGTTCACCGCCTCAAGAGACAGTTCCA  180
V  90.4% (226/250)  IGHV3-23*01  137  ............C.A.......TA.....GG...CA.....................A.............AT...C.......A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  L  D  S  R  V  G  
                    Query_9551   181  AGAACACACTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAGGACTTAGACTCCCGTGTTGGCT  270
V  90.4% (226/250)  IGHV3-23*01  227  .......G........G...................................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD5-12*01  11   -------------------------------------------------------------------------------------.....  15

                                      IMGT--------------------->                                  
                                      Y  H  R  A  D  Y  L  H  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9551   271  ACCATCGCGCTGATTACCTCCACCACTGGGGCCAGGGCACCCTGGTCACTGTCTCCTCAG  330
D  100.0% (7/7)     IGHD5-12*01  16   ..----------------------------------------------------------  17
J  92.3% (48/52)    IGHJ1*01     1    --------.....A...T....G..........................C..........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_323669

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           21.8    0.043
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACCCCCTTTTGACTAC	ARDPAVVVQWVAGTGPPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  C  Q  A  P  G  K  G  L  
                    Query_9552   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCTGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C............C........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9552   91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.0% (230/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_9552   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.0% (230/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  P  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9552   271  GGGTGGCTGGTACAGGACCCCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_163824

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           410     1e-116
IGHD6-13*01                                                                                           14.1    10    
IGHJ4*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGCG	GCAACACCTGGTA	TCGAGATTCTCAGGCCGGCAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGCGGCAACACCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGAC	ARHSGNTWYRDSQAGIYFDD	291	350	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	70	1	0	98.6
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	103	11	0	90.4
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	292	277	15	0	94.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  G  G  
                    Query_9553   7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCCCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCGGCT  96
V  94.9% (277/292)  IGHV5-51*01  5    ..............................................T....................................AC.A...  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  N  
                    Query_9553   97   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAACC  186
V  94.9% (277/292)  IGHV5-51*01  95   .......................................................................................G..  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  V  D  R  S  L  G  T  A  Y  L  Q  W  P  S  L  K  A  S  D  T  
                    Query_9553   187  CGTCCTTTCAAGGACAGGTCACCATCTCAGTCGACAGGTCCCTCGGAACCGCCTACCTGCAGTGGCCCAGCCTGAAGGCCTCGGACACCG  276
V  94.9% (277/292)  IGHV5-51*01  185  .......C.....C................C.....A....A..A.C..................AG.......................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-------------------------CDR3-IMGT------------------------>                
                                      A  M  Y  Y  C  A  R  H  S  G  N  T  W  Y  R  D  S  Q  A  G  I  Y  F  D  D  W  G  Q  G  T  
                    Query_9553   277  CCATGTACTACTGTGCGAGACACAGCGGCAACACCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGACTGGGGCCAGGGAACCC  366
V  94.9% (277/292)  IGHV5-51*01  275  .......T..............--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  84.6% (11/13)    IGHD6-13*01  8    ---------------------------...G..G......--------------------------------------------------  20
J  95.7% (45/47)    IGHJ4*02     2    -------------------------------------------------------------......T...T..................  30

                                                        
                                      L  V  T  V  S  S  
                    Query_9553   367  TGGTCACCGTCTCCTCAG  384
J  95.7% (45/47)    IGHJ4*02     31   ..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_139486

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            341     5e-96
IGHD3-16*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TTGGCCCCGGATTCAGATATATGGGG	TTGGGGGAG	N/A	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATATTGGCCCCGGATTCAGATATATGGGGTTGGGGGAGTAC	ARDIGPGFRYMGLGEY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	252	10	9	1	0	90
Total	N/A	N/A	252	235	17	0	93.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  D  Y  A  M  H  W  F  R  Q  V  P  G  K  G  L  
                    Query_9554   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGAAGATTATGCCATGCATTGGTTCCGGCAAGTTCCAGGGAAGGGCCTGG  90
V  93.3% (235/252)  IGHV3-9*01   47   ...........................................T..............C...G.........C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  S  S  T  K  I  G  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9554   91   AGTGGGTCTCAGGTATTAATTGGAGTAGTACTAAAATAGGCTATGCGGACGCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.3% (235/252)  IGHV3-9*01   137  ..................G.....A....GG..GC...............T.......................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  K  S  L  Y  V  Q  M  N  N  L  R  P  E  D  T  A  L  Y  Y  C  A  R  D  I  G  P  G  F  R  
                    Query_9554   181  AGAAGTCCCTGTATGTACAAATGAACAATCTGAGACCTGAGGACACGGCCTTGTATTACTGTGCAAGAGATATTGGCCCCGGATTCAGAT  270
V  93.3% (235/252)  IGHV3-9*01   227  ....C.........C.G..........G.......G..............................A.....------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                      T------------------>                                  
                                      Y  M  G  L  G  E  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_9554   271  ATATGGGGTTGGGGGAGTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  324
D  100.0% (9/9)     IGHD3-16*01  16   --------.........-------------------------------------  24
J  97.3% (36/37)    IGHJ4*02     12   -----------------................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_254721

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-10*01                                                                                           39.1    3e-07
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ACGGAGAA	TACTATGGTTCGGGGAGTTA	GGCGTCTT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAACGGAGAATACTATGGTTCGGGGAGTTAGGCGTCTTGGTATGGACGTC	ARTENTMVRGVRRLGMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	233	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  R  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9555   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGCAGATTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (233/243)  IGHV4-59*01  49   .......................................A.T..T.A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9555   91   TGGATTGGATATATTTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  95.9% (233/243)  IGHV4-59*01  139  ........G.....C...........................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  E  N  T  M  V  R  G  V 
                    Query_9555   181  CACTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAACGGAGAATACTATGGTTCGGGGAGTT  270
V  95.9% (233/243)  IGHV4-59*01  229  ..G............C............................................A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD3-10*01  5    -----------------------------------------------------------------------...................  23

                                      -------------------->                                 
                                       R  R  L  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9555   271  AGGCGTCTTGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
D  100.0% (20/20)   IGHD3-10*01  24   .-----------------------------------------------------  24
J  100.0% (45/45)   IGHJ6*02     18   ---------.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_342554

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           355     3e-100
IGHD6-19*01                                                                                           14.1    8.3   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGTTTCACC	GTGGCTG	ATCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGTTTCACCGTGGCTGATCCTTTTGACTAC	ARGRFTVADPFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  S  T  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9556   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTCAGCACGTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  95.6% (238/249)  IGHV3-64*01  47   ................................T..........T.GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  T  I  S  S  N  G  E  S  T  H  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9556   91   AATATGTTTCAACTATTAGTAGTAATGGGGAGAGCACACATTATGCAAACTCTGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  95.6% (238/249)  IGHV3-64*01  137  ...........G..................GT......T...................................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  G  R  F  T  V  A  D  
                    Query_9556   181  AGAACACGCTGTATCTTCAAATGGGCAGCCTGAGAGGTGAGGACACGGCTGTATATTACTGTGCGAGAGGCCGTTTCACCGTGGCTGATC  270
V  95.6% (238/249)  IGHV3-64*01  227  ....................................C........T......G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-19*01  11   --------------------------------------------------------------------------------.......---  17

                                      ---------->                                  
                                      P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9556   271  CTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (43/43)   IGHJ4*02     6    --...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_254720

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           357     1e-100
IGHD1-26*01                                                                                           14.1    8.2   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGCCCTTTTA	TGGGGGCTAC	ATGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGCCCTTTTATGGGGGCTACATGGATTGACTAC	ARCPFMGATWIDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  G  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9557   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTTTGGCCTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGA  90
V  96.0% (238/248)  IGHV3-33*01  47   ................................................A....A...................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      K  W  V  A  N  I  Y  Y  D  G  N  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9557   91   AGTGGGTGGCAAATATCTACTATGATGGAAATAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (238/248)  IGHV3-33*01  137  ...........GT...A.GG..........G...........................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  C  P  F  M  G  A  T  
                    Query_9557   181  AGAACACGCTGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGATGCCCTTTTATGGGGGCTACAT  270
V  96.0% (238/248)  IGHV3-33*01  227  ...................A................................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD1-26*01  8    ------------------------------------------------------------------------------....A.....--  17

                                      ---------->                                  
                                      W  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9557   271  GGATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (42/42)   IGHJ4*02     7    ---..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_132757

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           297     8e-83
IGHD6-19*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGGGA	AGGCTCTTGCCGGCTC	TGGCTGGTAC	AAGGAGGGCAT	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAGGCTCTTGCCGGCTCTGGCTGGTACAAGGAGGGCATTTACTACTCCGACTACGGTATCGACGTC	GKALAGSGWYKEGIYYSDYGIDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	218	28	0	88.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9558   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCACCTATGCCCTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  88.6% (218/246)  IGHV3-30*04  47   ...........................................T.G......TA....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  V  S  F  N  G  N  G  Q  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  D  S  
                    Query_9558   91   AGTGGGTGGCACTTGTTTCGTTTAATGGAAATGGTCAATACTACGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACGATTCCA  180
V  88.6% (218/246)  IGHV3-30*04  137  ...........G..A.A..A.A.G......G.AA.A...................................A...........A......  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  T  T  I  Y  L  E  M  N  D  L  R  D  N  D  T  A  V  Y  F  C  G  K  A  L  A  G  S  G  W  
                    Query_9558   181  AGACCACAATTTATCTGGAAATGAACGACCTGAGAGATAACGACACGGCTGTGTATTTCTGTGGGAAGGCTCTTGCCGGCTCTGGCTGGT  270
V  88.6% (218/246)  IGHV3-30*04  227  ...A...GC.G......C........AG........C.G.G................A.....C..------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD6-19*01  12   ----------------------------------------------------------------------------------........  19

                                      --CDR3-IMGT----------------------------->                                 
                                      Y  K  E  G  I  Y  Y  S  D  Y  G  I  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9558   271  ACAAGGAGGGCATTTACTACTCCGACTACGGTATCGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
D  100.0% (10/10)   IGHD6-19*01  20   ..------------------------------------------------------------------------  21
J  95.1% (58/61)    IGHJ6*02     2    -------------........A.T..........G.......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_63053

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD3-10*01                                                                                           31.5    6e-05 
IGHJ5*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GTG	TTACTATGATTCGGGGAGT	GACTCGGT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACGTGTTACTATGATTCGGGGAGTGACTCGGTACAACTGGCTCGACCCC	VRRVTMIRGVTRYNWLDP	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  S  Y
                    Query_9559   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGGTACAGTTTTACCAGTTA  90
V  93.1% (270/290)  IGHV5-51*01  6    .............................................................A..........A.....C........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  V  D  S  D  T  T  Y  S  P
                    Query_9559   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGTAAAGGCCTGGAATGGATGGGGATCATCTATCCTGTTGACTCTGACACCACTTACAGCCC  180
V  93.1% (270/290)  IGHV5-51*01  96   ........G.....................G...........G......................G.........T....GA........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  A  I  S  T  A  Y  L  Q  W  S  S  L  S  A  S  D  S  G
                    Query_9559   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGGCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAGCGCCTCGGACAGCGG  270
V  93.1% (270/290)  IGHV5-51*01  186  .............................C.......T....................................AG..........C..C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        I  Y  Y  C  V  R  R  V  T  M  I  R  G  V  T  R  Y  N  W  L  D  P  W  G  Q  G  T  L  V  T
                    Query_9559   271  CATTTACTACTGTGTGAGACGTGTTACTATGATTCGGGGAGTGACTCGGTACAACTGGCTCGACCCCTGGGGCCAGGGAACCCTGGTCAC  360
V  93.1% (270/290)  IGHV5-51*01  276  ...G..T.......C.....----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-10*01  4    -----------------------........G..........------------------------------------------------  22
J  98.0% (50/51)    IGHJ5*02     1    --------------------------------------------------........T...............................  40

                                                 
                                        V  S  S  
                    Query_9559   361  CGTCTCCTCAG  371
J  98.0% (50/51)    IGHJ5*02     41   ...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_93223

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            388     5e-110
IGHD6-19*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	N/A	CAGTGGCTGGT	TAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGCAGTGGCTGGTTAATTGACTAC	AHSSGWLIDY	263	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	110	4	0	96.5
CDR3-IMGT (germline)	263	270	8	8	0	0	100
Total	N/A	N/A	270	259	11	0	95.9


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  T  A  V  G  V  H  W  I  R
                    Query_9560   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTACTGCAGTGGGTGTACACTGGATCCG  90
V  95.9% (259/270)  IGHV2-5*01   30   .................................................................G..G.........GGG.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  L  Y  W  N  D  D  N  H  Y  S  P  S  L  K  S  R  L  T
                    Query_9560   91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCCTTTATTGGAATGATGATAACCACTACAGCCCATCTCTGAAGAGCAGGCTTAC  180
V  95.9% (259/270)  IGHV2-5*01   120  .....................................A...................G.G...........................C..  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        V  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  V  D  P  V  D  T  A  T  Y  Y  C  A  H  S
                    Query_9560   181  CGTCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACGTGGACCCTGTGGACACAGCCACATATTACTGTGCACACAG  270
V  95.9% (259/270)  IGHV2-5*01   210  .A...............................................A........................................  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                      ---CDR3-IMGT--------->                                  
                                        S  G  W  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9560   271  CAGTGGCTGGTTAATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  326
D  100.0% (11/11)   IGHD6-19*01  9    ...........---------------------------------------------  19
J  100.0% (42/42)   IGHJ4*02     7    --------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_16945

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           434     4e-124
IGHD6-13*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTATCGT	TATGGCAGCAGGTGGT	TACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTATCGTTATGGCAGCAGGTGGTTACCACTTTGACTTC	ARLIVMAAGGYHFDF	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	284	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  T  Y
                    Query_9561   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCACCTA  90
V  97.9% (284/290)  IGHV5-51*01  6    .............................................................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  F  D  T  R  Y  S  P
                    Query_9561   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTTTGATACCAGATATAGCCC  180
V  97.9% (284/290)  IGHV5-51*01  96   .......................................................................C............C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9561   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (284/290)  IGHV5-51*01  186  .....................................................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  A  R  L  I  V  M  A  A  G  G  Y  H  F  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9561   271  CATCTATTACTGTGCGAGACTTATCGTTATGGCAGCAGGTGGTTACCACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  97.9% (284/290)  IGHV5-51*01  276  ...G................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  87.5% (14/16)    IGHD6-13*01  4    ---------------------------...A.......C....-----------------------------------------------  19
J  97.8% (44/45)    IGHJ4*02     4    -----------------------------------------------.........A.................................  46

                                        
                                        
                    Query_9561   361  AG  362
J  97.8% (44/45)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_16946

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           367     6e-104
IGHD3-3*01                                                                                            37.2    1e-06 
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	TACGATTTTTGGAGTGGTT	CAAA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTACGATTTTTGGAGTGGTTCAAAACTACTACTACTACGCTATGGACGTC	ARGGTIFGVVQNYYYYAMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_9562   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-11*01  47   ....................................C.....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  R  S  G  S  I  I  Y  N  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9562   91   AGTGGGTTTCATACATTAGTCGTAGTGGTAGTATCATATACAACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  97.2% (242/249)  IGHV3-11*01  137  ....................A............C.......T................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  S  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  T  I  F  G  V  
                    Query_9562   181  AGAGTTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGGGGGTACGATTTTTGGAGTGG  270
V  97.2% (242/249)  IGHV3-11*01  227  ...AC.......A........................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (19/19)   IGHD3-3*01   5    -------------------------------------------------------------------------.................  21

                                      R3-IMGT------------------------>                                 
                                      V  Q  N  Y  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  P  V  S  S 
                    Query_9562   271  TTCAAAACTACTACTACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCCCCGTCTCCTCA  335
D  100.0% (19/19)   IGHD3-3*01   22   ..---------------------------------------------------------------  23
J  96.6% (57/59)    IGHJ6*02     4    ------...............G...............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_127818

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           308     4e-86
IGHD3-10*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	GACCAAGG	GGTTCGGGGACTTA	CTGCAGCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGACCAAGGGGTTCGGGGACTTACTGCAGCCCTTTGACCAC	VRTKGFGDLLQPFDH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	222	25	0	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  T  S  G  F  T  L  S  S  S  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9563   1    GGTCCCTGAGACTCTCCTGTGAAACCTCTGGATTCACCTTGAGTAGTTCCACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.9% (222/247)  IGHV3-21*01  47   .....................C.G................C.....C.AT.G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  T  S  G  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9563   91   AGTGGGTCGCATCTATTACCAGTGGAAGCACTTACATCTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  89.9% (222/247)  IGHV3-21*01  137  ........T....C....GT...A.T..T.G......A....................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  L  S  G  L  R  V  E  D  T  A  V  Y  S  C  V  R  T  K  G  F  G  D  L  
                    Query_9563   181  AGAACTCACTGTTTCTGCAACTGAGTGGCCTGAGAGTCGAGGACACGGCTGTCTATTCCTGTGTGAGGACCAAGGGGTTCGGGGACTTAC  270
V  89.9% (222/247)  IGHV3-21*01  227  ............A.......A...ACA.........C...............G....A.....C...-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD3-10*01  11   ---------------------------------------------------------------------------..........G...-  24

                                      ---------------->                                  
                                      L  Q  P  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9563   271  TGCAGCCCTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.7% (43/44)    IGHJ4*02     5    -------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_127819

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     5e-95
IGHD1-1*01                                                                                            12.2    31   
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTAC	AEEKRRVPRGTFHY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	50	1	0	98
CDR2-IMGT	102	125	24	23	1	0	95.8
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	232	224	8	0	96.6


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  I  T  F  I  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  
                    Query_9564   16   GTGCAGCCTCTGGAATCACCTTTATCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCCATTA  105
V  96.6% (224/232)  IGHV3-23*01  65   ..............T.........G..G.........................................................T....  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  K  N  T  L  Y  L  
                    Query_9564   106  GTGGTGGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGAAGAACACGCTGTATCTGC  195
V  96.6% (224/232)  IGHV3-23*01  155  .....A......................................................G.........C...................  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  G  T  F  H  Y  W  
                    Query_9564   196  AAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTACTGGG  285
V  96.6% (224/232)  IGHV3-23*01  245  ...............................................A....--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------......------------------------------  17
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------------------------------------------....G.........  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_9564   286  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (43/44)    IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_187018

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           321     7e-90
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_9565   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  L  D  A  S  K  S 
                    Query_9565   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCGTTAGACGCGTCCAAGAGC  180
V  91.8% (225/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A..AG.....A.........A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  L  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_9565   181  CAGTTCTCCCTGAAGCTGAGCTCTCTGACCGCTGCGGACGCGGCCGTGTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  91.8% (225/245)  IGHV4-59*01  229  ........................G..............A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9565   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_16943

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           369     2e-104
IGHD2-15*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATCGCGCTT	TATTGTAGTGGTGGTCCCTGCTAC	CCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATCGCGCTTTATTGTAGTGGTGGTCCCTGCTACCCCGACTAC	ARIALYCSGGPCYPDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9566   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACATTTAGTACTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.6% (242/248)  IGHV3-48*03  47   .....................................C..C....G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  S  G  S  T  M  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9566   91   AGTGGATTTCATACATTAGTAGTAGTGGTAGTACCATGTACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (242/248)  IGHV3-48*03  137  .....G...............................A....................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  I  A  L  Y  C  S  G  
                    Query_9566   181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAATCGCGCTTTATTGTAGTGGTG  270
V  97.6% (242/248)  IGHV3-48*03  227  ............A.......................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (22/24)    IGHD2-15*01  5    -----------------------------------------------------------------------------.............  17

                                      T------------------>                                  
                                      G  P  C  Y  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9566   271  GTCCCTGCTACCCCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  91.7% (22/24)    IGHD2-15*01  18   ..AG.......-------------------------------------------  28
J  100.0% (40/40)   IGHJ4*02     9    --------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_127814

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            385     4e-109
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	248	2	0	99.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9567   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.2% (248/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_9567   91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  99.2% (248/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_9567   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  99.2% (248/250)  IGHV3-7*01   227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9567   271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_127815

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           321     7e-90
IGHD3-3*01                                                                                            23.8    0.011
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTCTTTAATG	ACGATTATTGGAGTG	ATGATTTTCGTCGACACCTAGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCTTTAATGACGATTATTGGAGTGATGATTTTCGTCGACACCTAGGGCTTGACAAC	ARHVFNDDYWSDDFRRHLGLDN	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	228	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  V  T  A  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9568   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCTGTCACTGCCAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  90.8% (228/251)  IGHV4-39*01  49   ...............................G...CA...GCAGT............................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  H  T  S 
                    Query_9568   91   CTGGAGTGGATTGGAAATATCTATTATAGTGGGACCACCTACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCCGTGCACACGTCC  180
V  90.8% (228/251)  IGHV4-39*01  139  ..............G.G.................G...............G.......................A.....AG........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  P  R  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  H  V  F  N  D  D  Y 
                    Query_9568   181  AAGAATCAGTTCTCCCCGAGGCTGAATTCTGTGACCGCCGCAGACTCGGCTGTATATTACTGTGCGAGACATGTCTTTAATGACGATTAT  270
V  90.8% (228/251)  IGHV4-39*01  229  .....C..........T..A.....GC..................A.......G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  93.3% (14/15)    IGHD3-3*01   6    ----------------------------------------------------------------------------------......T.  13

                                      --CDR3-IMGT--------------------------->                                  
                                       W  S  D  D  F  R  R  H  L  G  L  D  N  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_9568   271  TGGAGTGATGATTTTCGTCGACACCTAGGGCTTGACAACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  343
D  93.3% (14/15)    IGHD3-3*01   14   .......------------------------------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    -------------------------------.....T........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_187014

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           291     5e-81
IGHD2-15*01                                                                                           14.1    8.6  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGGGGATTTCGAGAA	GGTGGTA	AATCGGTCAGT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGGGGATTTCGAGAAGGTGGTAAATCGGTCAGTTTTGCCTGC	ARDGGFREGGKSVSFAC	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  S  T  Y  T  M  N  W  L  R  Q  A  P  G  K  E  P  
                    Query_9569   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGGTTCAGTACTTATACTATGAACTGGCTTCGCCAGGCTCCAGGGAAGGAGCCGC  90
V  87.2% (218/250)  IGHV3-21*01  47   ....................................CC.......GC....GC.........G.C...................G..T.G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  S  V  S  G  D  G  T  Y  I  Y  Y  A  E  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9569   91   AATGGGTCGCATCTGTGAGTGGAGATGGAACCTACATATACTACGCAGAATCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  87.2% (218/250)  IGHV3-21*01  137  .G......T....CA.T...A.TAG.A.T.GT.................C...G...................................A  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      E  N  S  V  F  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  G  G  F  R  E  G  
                    Query_9569   181  AGAACTCAGTGTTTCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCTGTCTATTATTGTGCGAGAGACGGGGGATTTCGAGAAGGTG  270
V  87.2% (218/250)  IGHV3-21*01  227  ........C...A.......................C...............G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-15*01  14   --------------------------------------------------------------------------------------....  17

                                      GT-------------------->                                  
                                      G  K  S  V  S  F  A  C  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_9569   271  GTAAATCGGTCAGTTTTGCCTGCTGGGGCCAGGGAACCCTTGTCATCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD2-15*01  18   ...------------------------------------------------------  20
J  90.7% (39/43)    IGHJ4*02     6    --------------....A..A..................G....C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_187015

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGTGAGGAAGGA	TACTATGATACTAGTGGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGTGAGGAAGGATACTATGATACTAGTGGTTATTCGGACTAT	AKDGEEGYYDTSGYSDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  T  P  G  K  G  L  
                    Query_9570   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGATATGCCATGTCCTGGGTCCGCCAGACTCCAGGGAAGGGCCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ...........................................C..C.........AG.............G.............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  V  S  G  S  G  G  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9570   91   AGTGGGTCTCAACAGTGAGTGGTAGTGGAGGTGGCACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  ...........G.TA.T...........T...A..........C..............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  I  Y  Y  C  A  K  D  G  E  E  G  Y  Y  
                    Query_9570   181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAACCGAGGACACGGCCATATATTACTGTGCGAAAGATGGTGAGGAAGGATACTATG  270
V  93.6% (234/250)  IGHV3-23*01  227  ..............C....................G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.5% (21/22)    IGHD3-22*01  5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                      D  T  S  G  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9570   271  ATACTAGTGGTTATTCGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.5% (21/22)    IGHD3-22*01  12   ...G...........------------------------------------------  26
J  97.5% (39/40)    IGHJ4*02     9    -----------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_16948

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9571   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9571   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_9571   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9571   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_16949

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           272     2e-75
IGHD2-21*01                                                                                           10.3    119  
IGHJ2*01                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGACAAGGGGAC	TGTGG	A	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAAGGGGACTGTGGATGGTACTTCGATCTC	ARRQGDCGWYFDL	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	60	33	26	4	3	78.8
FR2-IMGT	61	111	51	44	7	0	86.3
CDR2-IMGT	112	129	21	12	6	3	57.1
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	252	217	29	6	86.1


Alignments

                                      <--------FR1-IMGT---------><-----------CDR1-IMGT-----------><--------------------FR2-IMGT-
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  S  A  G  H  Y  W  S  W  I  R  Q  T  P  G  K 
                    Query_9572   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGCAGTGCTGGTCACTATTGGAGTTGGATCCGCCAGACCCCCGGAAAG  90
V  86.1% (217/252)  IGHV4-31*03  49   ...............................G............---..G....T....C.....C............CA...A..G...  135
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S     G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K 

                                      --------------------><-----CDR2-IMGT-----><-----------------------------------------------
                                       G  L  E  W  M  G  Y  I  F  Y  T  V     P  Y  Y  D  P  S  L  K  S  R  L  T  M  S  G  D  T 
                    Query_9572   91   GGCCTGGAGTGGATGGGTTACATCTTTTATACTGTGC---CATACTACGACCCGTCGCTCAAGAGTCGACTCACCATGTCAGGAGACACC  177
V  86.1% (217/252)  IGHV4-31*03  136  ..............T..G.......A...C.G..G.AGCA.C......A.......C............G.T.....A....T......G  225
                                       G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T 

                                      -----FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT
                                       A  K  N  Q  F  S  L  R  L  T  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  R  Q  G  D  C  G 
                    Query_9572   178  GCTAAGAACCAGTTTTCCCTGAGGCTGACCTCTGTGACTTCCGCGGACACGGCCGTGTATTACTGTGCGAGACGACAAGGGGACTGTGGA  267
V  86.1% (217/252)  IGHV4-31*03  226  T.............C.......A.....G..........G................................------------------  297
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                   
D  100.0% (5/5)     IGHD2-21*01  8    ------------------------------------------------------------------------------------.....-  12

                                      -------------->                                  
                                       W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9572   268  TGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  316
J  100.0% (49/49)   IGHJ2*01     5    .................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_127812

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	274	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_9573   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  95.1% (274/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_9573   91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  95.1% (274/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_9573   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  95.1% (274/288)  IGHV5-51*01  186  ...............G.........................T.........................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9573   271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  95.1% (274/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_127813

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           378     3e-107
IGHD3-10*01                                                                                           12.2    35    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCCAGC	GGGAGT	GAAAAGTTAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGCAGATCCAGCGGGAGTGAAAAGTTAATTGACTCT	GRSSGSEKLIDS	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	4	2	0	66.7
Total	N/A	N/A	288	265	23	0	92


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  E  A  S  G  Y  T  F  S  N  Y 
                    Query_9574   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAAGTCTCCTGCGAGGCTTCTGGTTACACCTTTAGCAACTAC  91
V  92.0% (265/288)  IGHV1-18*04  7    ..................................................G.........A.....................C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       E  I  S  W  V  R  Q  A  R  G  Q  G  L  E  W  M  G  C  I  S  G  Y  S  G  D  T  E  Y  A  Y 
                    Query_9574   92   GAAATCAGCTGGGTGCGACAGGCCCGTGGACAAGGGCTTGAGTGGATGGGATGCATCAGCGGTTACAGTGGTGACACAGAGTATGCATAC  181
V  92.0% (265/288)  IGHV1-18*04  97   .GT......................C...........................G.......C.....A....A.....A.C......C.G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       Q  F  R  G  R  V  T  M  T  T  D  A  S  A  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_9574   182  CAATTCCGGGGCAGAGTCACCATGACCACAGACGCATCCGCGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.0% (265/288)  IGHV1-18*04  187  A.GC...A.........................A.....A..................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  G  R  S  S  G  S  E  K  L  I  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9574   272  GTGTATTACTGTGGCAGATCCAGCGGGAGTGAAAAGTTAATTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.0% (265/288)  IGHV1-18*04  277  .............CG...----------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD3-10*01  17   ------------------------......----------------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    ----------------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_51534

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGGG	AGCAATGGCTGG	GGAAGGTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTATGGACGCC	ARGHRGSNGWGRYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	228	17	6	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_9575   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCAGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  90.8% (228/251)  IGHV4-34*01  49   .......................C..T................------....C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  H  R  G  G  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_9575   91   CTGGAATGGATTGGGGAAATCATTCATCGTGGAGGCACCAACTACAACCCGTCCCTCCAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  90.8% (228/251)  IGHV4-34*01  133  .....G................A....A.....A.......................A................................  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  G  S  N  G 
                    Query_9575   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGGGAGCAATGGC  270
V  90.8% (228/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  R  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_9575   271  TGGGGAAGGTACTATAATTACGGTATGGACGCCTGGGGCCAGGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.............T.........A......A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_323661

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           366     2e-103
IGHD6-19*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAGGGTGGGGCCCA	TATAGTAGTGGCTGGT	TCCCGTG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAGGGTGGGGCCCATATAGTAGTGGCTGGTTCCCGTGTGACTAC	ARDRGWGPYSSGWFPCDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9576   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-30*03  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9576   91   AGTGGGTGGCAGTTATATCATATGATGGAAGTAAGAAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.8% (242/250)  IGHV3-30*03  137  ..................................T.....C.................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  D  T  L  F  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  G  W  G  P  Y  
                    Query_9576   181  AAGACACGCTGTTTCTGCAAATCAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGATAGAGGGTGGGGCCCATATA  270
V  96.8% (242/250)  IGHV3-30*03  227  .GA.........A.........G...............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.8% (15/16)    IGHD6-19*01  4    --------------------------------------------------------------------------------------....  7

                                      IMGT--------------------->                                  
                                      S  S  G  W  F  P  C  D  Y  W  G  Q  G  N  L  V  T  V  S  S  
                    Query_9576   271  GTAGTGGCTGGTTCCCGTGTGACTACTGGGGCCAGGGAAACTTGGTCACCGTCTCCTCAG  330
D  93.8% (15/16)    IGHD6-19*01  8    .C..........------------------------------------------------  19
J  95.1% (39/41)    IGHJ4*02     8    -------------------....................C.C..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_51536

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           375     3e-106
IGHD2-15*01                                                                                           10.3    137   
IGHJ5*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-15*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	GTAGC	CCATCAATTCCTCGGACGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCGTAGCCCATCAATTCCTCGGACGGACTGGTGCGACACC	VRDRSPSIPRTDWCDT	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	265	25	0	91.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  K  S  G  A  E  V  K  K  H  G  A  *  V  K  V  S  C  K  A  S  G  Y  T  L  T  S  Y 
                    Query_9577   2    CAGCTGGTGAAGTCTGGAGCTGAGGTGAAGAAGCATGGGGCCTAAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACGTTAACCAGTTAT  91
V  91.4% (265/290)  IGHV1-18*01  7    .........C........................C........C.................................C..T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  T  Y  N  V  D  T  N  Y  A  Q 
                    Query_9577   92   GGTATCAGCTGGGTGCGCCAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATAAGCACTTACAATGTTGACACAAACTATGCACAG  181
V  91.4% (265/290)  IGHV1-18*01  97   .................A................................A.....C...G.........G.A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  L  T  S  D  T  S  T  S  T  A  Y  M  E  V  R  S  L  I  S  Y  F  P  A 
                    Query_9577   182  AAGTTCCAGGGCAGAGTCACCCTGACCTCAGACACATCCACGAGCACAGCCTACATGGAGGTGAGGAGCCTGATATCTTACTTCCCGGCC  271
V  91.4% (265/290)  IGHV1-18*01  187  ...C.................A.....A................................C............G....G..GA.A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  F  V  R  D  R  S  P  S  I  P  R  T  D  W  C  D  T  W  G  E  V  T  L  V  T  V  S 
                    Query_9577   272  GTTTATTATTTTGTGAGAGATCGTAGCCCATCAATTCCTCGGACGGACTGGTGCGACACCTGGGGCGAGGTAACCCTGGTCACCGTCTCC  361
V  91.4% (265/290)  IGHV1-18*01  277  ..G.....C.G..C......----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (5/5)     IGHD2-15*01  18   ----------------------.....---------------------------------------------------------------  22
J  91.5% (43/47)    IGHJ5*02     4    ----------------------------------------------......T....C........C...G...................  47

                                         
                                       S 
                    Query_9577   362  TCA  364
J  91.5% (43/47)    IGHJ5*02     48   ...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_51537

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           388     5e-110
IGHD7-27*01                                                                                           14.1    8.8   
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGTATCGCCT	CTGGGGA	N/A	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGTATCGCCTCTGGGGAACAACTGGTTCTACCCC	ARQVSPLGNNWFYP	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	23	1	0	95.8
FR2-IMGT	75	125	51	50	1	0	98
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	110	4	0	96.5
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	258	10	0	96.3


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  I  V  S  G  G  S  I  S  S  H  Y  W  S  W  I  R  
                    Query_9578   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCTCCATCAGTAGTCACTACTGGAGCTGGATCCGGC  90
V  96.3% (258/268)  IGHV4-59*08  26   ................T.........................C.........................T.....................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  M  Y  Y  T  G  S  T  K  Y  N  P  S  L  R  S  R  V  T  
                    Query_9578   91   AGCCACCAGGGAAGGGACTGGAGTGGATTGGGTATATGTATTACACTGGGAGCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCACCA  180
V  96.3% (258/268)  IGHV4-59*08  116  ....C................................C.......G............C................A..............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  
                    Query_9578   181  TATCAGTAGACACGTCCAAGAATCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACAAG  270
V  96.3% (258/268)  IGHV4-59*08  206  ......................C...............C.................................................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -------CDR3-IMGT--------------->                                  
                                      V  S  P  L  G  N  N  W  F  Y  P  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_9578   271  TATCGCCTCTGGGGAACAACTGGTTCTACCCCTGGGGCCAGGGAACCCTGGTTACCGTCTCCGCAG  336
D  100.0% (7/7)     IGHD7-27*01  5    --------.......---------------------------------------------------  11
J  94.1% (48/51)    IGHJ5*02     1    ---------------...........G.........................C.........T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_51531

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     8e-92
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCTAGGAGATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCTAGGAGATCTTGACTAC	ASLGDLDY	240	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	225	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  R  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  Q  
                    Query_9579   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTCGTTACTTCTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGCAGT  93
V  93.4% (225/241)  IGHV4-59*01  50   .....TCC...A....C........................A......A.....G...............................G...  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  P  S  Q  N  
                    Query_9579   94   GGATTGGATATATCTCTTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTGGACCCGTCCCAGAACC  183
V  93.4% (225/241)  IGHV4-59*01  140  .......G.......A...C..........................................A..........A...A.....A......  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------CDR3-IMGT------>          
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  G  D  L  D  Y  W  G  Q  
                    Query_9579   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGTCTAGGAGATCTTGACTACTGGGGCCAGG  273
V  93.4% (225/241)  IGHV4-59*01  230  .............................................................-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------------------------------..................  24

                                                              
                                      G  T  L  V  T  V  S  S  
                    Query_9579   274  GAACCCTGGTCACCGTCTCCTCAG  297
J  100.0% (42/42)   IGHJ4*02     25   ........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_51532

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            332     3e-93
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTAGTGACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTAGTGACACCTGGTACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	229	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  V  G  S  I  T  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9580   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGTTGGCTCCATCACCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  93.1% (229/246)  IGHV4-4*01   49   ............................G...........G....................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  S  N 
                    Query_9580   91   GAGTGGATTGGGGAAATCTATCATGGTGGAGCCACCAACTACAACCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAC  180
V  93.1% (229/246)  IGHV4-4*01   139  ........................A....GAG......................A..................................G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  S  L  R  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_9580   181  AACCAGTTCTCCCTGAGTCTGAGGTCTCTGACCGCCGCGGACACGGCCGTGTATTTCTGCGCGGGACATCTAGTGACACCTGGTACTCGG  270
V  93.1% (229/246)  IGHV4-4*01   229  ................AG.....C...G...........................G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  E  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9580   271  GGTTTTGAGTCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.....C.A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_97137

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           420     7e-120
IGHD3-16*01                                                                                           12.2    37    
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGA	AATTGGTAACACCTAATTGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTC	ARRGKLVTPNWDYGMDV	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	281	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  
                    Query_9581   3    AGGTCCAGCTGGTACAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCA  92
V  95.9% (281/293)  IGHV1-18*04  2    ....T........G..........C.................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  C  Y  N  G  N  T  K  Y  
                    Query_9581   93   ACTACGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGTTGTTACAATGGTAACACAAAGTATG  182
V  95.9% (281/293)  IGHV1-18*04  92   G...............................................................CGC..................C....  181
                                      S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  L  K  H  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  
                    Query_9581   183  CACTGAAGCACCAGGGCAGAGTCACCATGACCACAGACACATCGACGAGCACAGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGACA  272
V  95.9% (281/293)  IGHV1-18*04  182  ...A.....T.................................C..............C...............................  271
                                      A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  V  Y  Y  C  A  R  R  G  K  L  V  T  P  N  W  D  Y  G  M  D  V  W  G  Q  G  T  T  V  
                    Query_9581   273  CGGCCGTGTATTACTGTGCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCA  362
V  95.9% (281/293)  IGHV1-18*04  272  .......................-------------------------------------------------------------------  294
                                      T  A  V  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------......------------------------------------------------------------  23
J  98.0% (49/50)    IGHJ6*02     13   ---------------------------------------------------.......................................  51

                                                 
                                      T  I  S  S 
                    Query_9581   363  CCATCTCCTCA  373
J  98.0% (49/50)    IGHJ6*02     52   ..G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_51539

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           346     2e-97
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCG	ACGGTGAC	ACCGAGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACGGTGACACCGAGAATGACTAC	AADGDTENDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  S  F  G  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_9582   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGACTCACCTTCAGTAGCTTTGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGG  90
V  95.1% (233/245)  IGHV3-33*01  47   ................................T...............A......................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  K  K  Y  Y  T  D  S  V  K  G  R  F  I  I  S  R  D  N  S  
                    Query_9582   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAAGAAATACTATACAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCA  180
V  95.1% (233/245)  IGHV3-33*01  137  ..................................T.........G........................C....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  F  C  A  A  D  G  D  T  E  N  D  
                    Query_9582   181  AGAACACGTTGTATCTGCAGATGAACAGCCTGAGAGTCGACGACACGGCTGTCTATTTCTGTGCGGCCGACGGTGACACCGAGAATGACT  270
V  95.1% (233/245)  IGHV3-33*01  227  ........C..........A................C...G...........G....A.......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD4-17*01  6    ---------------------------------------------------------------------........-------------  13
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9582   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_2506

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           269     2e-74
IGHD3-10*02                                                                                           21.8    0.039
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GTATCACTATGTTC	ACGGCGTAC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGTATCACTATGTTCACGGCGTACTTCGACCCC	ARGITMFTAYFDP	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	13	8	0	61.9
FR3-IMGT	126	239	114	95	19	0	83.3
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	209	37	0	85


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  V  S  G  F  T  V  S  R  T  Y  M  S  W  V  R  Q  T  P  E  K  G  L  
                    Query_9583   1    GGTCCCTGAGACTCTCCTGTGTAGTCTCTGGGTTCACCGTCAGTCGCACCTACATGAGCTGGGTCCGCCAGACTCCAGAAAAGGGGCTGG  90
V  85.0% (209/246)  IGHV3-53*01  47   .....................C..C...................A...A......................G......GG..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  H  Y  V  G  G  Q  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  M  D  D  S  K  
                    Query_9583   91   AGTGGGTCTCACTCCATTACGTCGGTGGTCAGACATATTACGCAGAGTCAGTGAAGGGCCGATTCACCATCTCCATGGACGACTCCAAGA  180
V  85.0% (209/246)  IGHV3-53*01  137  ...........G.TAT...TAG.......AGC.....C........C..C.........................GA...A.T.......  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------CDR3-IMGT-------
                                      N  T  L  Y  L  Q  L  N  S  V  T  V  D  D  T  A  V  Y  Y  C  A  R  G  I  T  M  F  T  A  Y  
                    Query_9583   181  ACACTCTGTACCTTCAACTCAATAGTGTGACAGTCGACGACACGGCCGTCTATTATTGTGCGCGAGGTATCACTATGTTCACGGCGTACT  270
V  85.0% (209/246)  IGHV3-53*01  227  ....G.....T......A.G..C..CC...G..C...G...........G.....C......A...------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  92.9% (13/14)    IGHD3-10*02  1    ------------------------------------------------------------------....T.........----------  14
J  97.7% (42/43)    IGHJ5*02     9    -----------------------------------------------------------------------------------------.  9

                                      ------->                                  
                                      F  D  P  W  G  P  G  T  L  V  T  V  S  S  
                    Query_9583   271  TCGACCCCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.7% (42/43)    IGHJ5*02     10   ...............A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_2504

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_9584   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_9584   91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCGGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A..A................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  L  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_9584   181  CAGTTCTCCCTGAAGCTGAGCTCTCTGACCGCTGCGGACGCGGCCGTGTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  ........................G..............A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9584   271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_202343

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD2-15*01                                                                                           14.1    8.6  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	ACCCGTTTTGTCT	TGGCGGTAGATGC	ATCTCGGGCTTGAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACCCGTTTTGTCTTGGCGGTAGATGCATCTCGGGCTTGAGTGACTTC	ARDPFCLGGRCISGLSDF	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  S  G  G  P  F  S  G  H  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_9585   4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTGGGCCCTTCAGTGGTCACTACTGGAACTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAGT  93
V  91.4% (222/243)  IGHV4-34*01  50   .....TCC...A....C.......A.......T...........T.........G.............C.....................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  R  G  G  S  T  T  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N  
                    Query_9585   94   GGATTGGGGAAATCAATCGTGGTGGAAGCACCACCTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCTGTAGACACGTCCAAGAACC  183
V  91.4% (222/243)  IGHV4-34*01  140  ..................A.A............A.................................A..A...................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  L  T  S  V  T  A  T  D  T  A  V  Y  Y  C  A  R  D  P  F  C  L  G  G  R  C  
                    Query_9585   184  AATTCTCCCTGAAACTGACCTCTGTGACCGCCACGGACACGGCTGTTTATTACTGTGCGCGAGACCCGTTTTGTCTTGGCGGTAGATGCA  273
V  91.4% (222/243)  IGHV4-34*01  230  .G...........G....G.............G.............G............A...---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  84.6% (11/13)    IGHD2-15*01  13   ----------------------------------------------------------------------------...T.....C...-  25

                                      ------------------->                                  
                                      I  S  G  L  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9585   274  TCTCGGGCTTGAGTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  97.6% (40/41)    IGHJ4*02     8    -------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_2502

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9586   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9586   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_9586   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9586   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_2503

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           318     5e-89
IGHD3-10*01                                                                                           23.8    0.010
IGHJ4*01                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-10*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	TGG	TCGGGGAGTTAT	C	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGTGGTCGGGGAGTTATCGACTAC	ASGRGVIDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  K  T  H  G  M  V  W  V  R  Q  A  P  G  K  G  L  
                    Query_9587   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAAAACCCATGGCATGGTCTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.1% (225/247)  IGHV3-30*03  47   ..........................................GT.G.T........CA................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  L  Y  D  G  S  N  Q  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9587   91   AGTGGGTGGCAGCAATTTTATATGATGGAAGTAATCAACACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  91.1% (225/247)  IGHV3-30*03  137  ............TT..A.C................A..T...................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      N  N  T  L  F  L  Q  M  N  S  L  R  T  D  D  T  G  L  Y  Y  C  A  S  G  R  G  V  I  D  Y  
                    Query_9587   181  ACAACACCCTGTTTCTGCAAATGAACAGCCTGAGAACTGACGACACGGGATTATATTACTGTGCAAGTGGTCGGGGAGTTATCGACTACT  270
V  91.1% (225/247)  IGHV3-30*03  227  .G.....G....A......................G....G.......CTG.G...........G..-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (12/12)   IGHD3-10*01  14   ----------------------------------------------------------------------............--------  25
J  100.0% (40/40)   IGHJ4*01     9    -----------------------------------------------------------------------------------.......  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9587   271  GGGGCCAAGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (40/40)   IGHJ4*01     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_2500

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           402     3e-114
IGHD3-9*01                                                                                            23.8    0.012 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTTTAAG	CGATATTTTGAC	CGGGGAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTAAGCGATATTTTGACCGGGGAGACTTTGACTTG	ARHFKRYFDRGDFDL	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	274	17	0	94.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  R  Y
                    Query_9588   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACAGCTTTACTAGATA  90
V  94.2% (274/291)  IGHV5-51*01  6    .............................................................A......................C..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  A  R  Q  M  S  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  V  K  Y  N  P
                    Query_9588   91   TTGGATCGGCTGGGCGCGCCAGATGTCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATGTTAAATACAACCC  180
V  94.2% (274/291)  IGHV5-51*01  96   C.............T..........C.......................................G..........ACC.G.....G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  L  S  A  D  K  S  I  S  T  A  Y  L  Q  W  N  R  L  K  A  S  D  T  A
                    Query_9588   181  GTCCTTCCAAGGCCAGGTCACCCTTTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAACAGGCTGAAGGCCTCGGACACCGC  270
V  94.2% (274/291)  IGHV5-51*01  186  ......................A.C........................................G...C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  A  R  H  F  K  R  Y  F  D  R  G  D  F  D  L  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9588   271  CATATATTACTGTGCGAGACATTTTAAGCGATATTTTGACCGGGGAGACTTTGACTTGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  94.2% (274/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD3-9*01   7    ----------------------------............--------------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------------.........AC................................  46

                                        
                                        
                    Query_9588   361  AG  362
J  95.6% (43/45)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_3683

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         288     5e-80
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	13	8	0	61.9
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  G  S  L  S  S  G  S  H  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_9589     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTCAGCAGTGGTAGTCACTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  86.8% (217/250)  IGHV4-30-2*01  49   ..................G.................A...........G..T...C.....G....AT...G..................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_9589     91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  86.8% (217/250)  IGHV4-30-2*01  139  .....G.........T.C...TA..A.AG...G.G..C.T.......C.C.......A................A..........G....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-------------------------C
                                         K  N  Q  F  S  L  K  L  S  S  V  G  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_9589     181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGGGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  86.8% (217/250)  IGHV4-30-2*01  229  ....................GC...........AC...............C........C.....C....--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD6-19*01    7    ---------------------------------------------------------------------------------....G....  15

                                        DR3-IMGT------------------------>                              
                                         W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S 
                    Query_9589     271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCC  333
D  91.7% (11/12)    IGHD6-19*01    16   ...------------------------------------------------------------  18
J  91.1% (41/45)    IGHJ6*02       15   ------------------.....T.......T................A.....A........  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_26687

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         374     8e-106
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTGG	CTATGGTTCGGGGAGTTATTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATCGTGGCTATGGTTCGGGGAGTTATTATTTTGACAAC	ARDRGYGSGSYYFDN	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	245	6	0	97.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  N  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_9590     1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCATCAGCAGTGGTGGTAACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  97.6% (245/251)  IGHV4-30-4*01  49   ..................A....C.........................A.T......................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9590     91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  97.6% (245/251)  IGHV4-30-4*01  139  ..................................G.......................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  G  Y  G  S  G 
                    Query_9590     181  AAGAACCAGTTCTCCCTGAAACTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGATCGTGGCTATGGTTCGGGG  270
V  97.6% (245/251)  IGHV4-30-4*01  229  ....................G..................................................-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01    7    -----------------------------------------------------------------------------.............  19

                                        ----------------->                                  
                                         S  Y  Y  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9590     271  AGTTATTATTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01    20   .........-------------------------------------------  28
J  97.7% (42/43)    IGHJ4*02       6    ---------......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_97132

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           316     2e-88
IGHD3-10*01                                                                                           10.3    116  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGA	CTTCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGACTTCAGGCCTTTGACTCC	ARGGLQAFDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  G  G  F  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_9591   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAACAGTGGTGGATTCTACTGGACTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  90.4% (226/250)  IGHV4-31*03  49   .......................C................G.........T.A........GC...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  Y  T  G  H  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  L  D  T  S 
                    Query_9591   91   CTAGAGTGGATTGGTTACATCTTTTACACTGGACACACCTACTACAATCCGTCCCTCAGGAGTCGACTTACCATTTCACTGGACACATCT  180
V  90.4% (226/250)  IGHV4-31*03  139  ..G...........G.......A.....G...GAG............C..........A.......G.......A...G.A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       E  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  L  Q  A  F  D 
                    Query_9591   181  GAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGGGGACTTCAGGCCTTTGAC  270
V  90.4% (226/250)  IGHV4-31*03  229  A...................G.....C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------.....---------------  20
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9591   271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.7% (43/44)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_91919

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD3-16*01                                                                                           10.3    114   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGAAAGA	GGGGG	CTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC	ARDQKEGAPDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	240	5	0	98


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9592   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.0% (240/245)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9592   91   TGGATTGGGTATATCTTTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.0% (240/245)  IGHV4-59*01  139  ................A.........................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  P  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  K  E  G  A  P  D  Y 
                    Query_9592   181  CAATTCTCCCTGAAACCGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC  270
V  98.0% (240/245)  IGHV4-59*01  229  ..G...........G.T................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   --------------------------------------------------------------------------.....-----------  22
J  100.0% (41/41)   IGHJ4*02     8    -----------------------------------------------------------------------------------.......  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9592   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (41/41)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_2509

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     6e-96
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAATCACACTA	TATTACTATGATAGTAGTG	CCCGATCGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCAATCACACTATATTACTATGATAGTAGTGCCCGATCGTACTACTTTGACTAC	ARSITLYYYDSSARSYYFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9593   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (233/248)  IGHV3-21*01  47   ..........................................G..G....A.....A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  E  S  G  T  Y  I  Y  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  A  
                    Query_9593   91   AGTGGGTCTCATCCATTAGTGAGAGTGGGACTTACATATACTACGCTGACTCCGTGAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (233/248)  IGHV3-21*01  137  ....................AGT...A.T.G...............A.....A............T........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  I  T  L  Y  Y  Y  
                    Query_9593   181  AGAACTCACTGTATCTGCAAATGAGCAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGATCAATCACACTATATTACTATG  270
V  94.0% (233/248)  IGHV3-21*01  227  ........................A...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (19/19)   IGHD3-22*01  2    --------------------------------------------------------------------------------..........  11

                                      R3-IMGT------------------------>                                  
                                      D  S  S  A  R  S  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9593   271  ATAGTAGTGCCCGATCGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  100.0% (19/19)   IGHD3-22*01  12   .........---------------------------------------------------------  20
J  100.0% (48/48)   IGHJ4*02     1    ------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_3681

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           413     2e-117
IGHD1-26*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCTTCT	TGGGAGCT	TTGTGTCGCCCCGGGGGCACGCCAATA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CTTCTTGGGAGCTTTGTGTCGCCCCGGGGGCACGCCAATAAC	LLGSFVSPRGHANN	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	282	113	109	4	0	96.5
Total	N/A	N/A	282	273	9	0	96.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  H
                    Query_9594   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCACCCA  90
V  96.8% (273/282)  IGHV5-51*03  6    ......................................................................................G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_9594   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGTTGGGAATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.8% (273/282)  IGHV5-51*03  96   ........G.....................................A....G......................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  G  H  V  T  I  S  A  D  T  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9594   181  GCCCTTCCAAGGCCACGTCACCATCTCAGCCGACACGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.8% (273/282)  IGHV5-51*03  186  .T.............G...................A........G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  L  L  G  S  F  V  S  P  R  G  H  A  N  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9594   271  CATGTATTACTGCCTTCTTGGGAGCTTTGTGTCGCCCCGGGGGCACGCCAATAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  96.8% (273/282)  IGHV5-51*03  276  ............-----------------------------------------------------------------------------  287
                                        M  Y  Y                                                                                
D  100.0% (8/8)     IGHD1-26*01  8    ------------------........---------------------------------------------------------------  15
J  100.0% (36/36)   IGHJ4*02     13   -----------------------------------------------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_202346

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            302     3e-84
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCCACGGGCTC	AGCAGTGGC	GATGACTCTGTTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCCACGGGCTCAGCAGTGGCGATGACTCTGTTTATGACTAC	VVHGLSSGDDSVYDY	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	102	12	0	89.5
CDR3-IMGT (germline)	241	241	1	1	0	0	100
Total	N/A	N/A	241	217	24	0	90


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  R  V  S  G  G  S  I  S  D  S  H  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_9595   1    ACCCTGTCCCTCACCTGCCGTGTCTCTGGTGGCTCCATCAGCGACAGTCACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.0% (217/241)  IGHV4-4*02   49   ..................GC......................AGT...A.........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  F  H  S  G  S  A  K  Y  N  P  S  L  Q  S  R  L  T  M  S  L  D  K  S  R 
                    Query_9595   91   GAGTGGATTGGGGAAGTTTTTCACAGTGGGAGCGCCAAGTACAACCCGTCCCTTCAGAGTCGACTCACCATGTCACTAGACAAGTCTAGG  180
V  90.0% (217/241)  IGHV4-4*02   139  ...............A.C.A...T.........A....C..............CA........G.......A...G..........C.A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  K  L  Q  S  V  T  A  A  Y  T  A  V  Y  Y  C  V  V  H  G  L  S  S  G  D  D 
                    Query_9595   181  AACCAGTTCTCCCTGAAGCTGCAGTCTGTGACCGCCGCGTACACGGCCGTGTATTACTGTGTGGTCCACGGGCTCAGCAGTGGCGATGAC  270
V  90.0% (217/241)  IGHV4-4*02   229  .....................AGC...............G.....................-----------------------------  289
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  100.0% (9/9)     IGHD6-19*01  7    ---------------------------------------------------------------------------.........------  15

                                      -------------->                                  
                                       S  V  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9595   271  TCTGTTTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (41/41)   IGHJ4*02     8    --------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_3686

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     1e-124
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_9596   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  98.3% (284/289)  IGHV5-51*01  6    .............................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_9596   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9596   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9596   271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_9596   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_202347

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         397     8e-113
IGHD6-19*01                                                                                           18.0    0.66  
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTG	ATAGTACTGGCTGGT	TTCTGGTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGATAGTACTGGCTGGTTTCTGGTT	ARRDSTGWFLV	299	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	76	72	72	0	0	100
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	298	123	106	8	9	86.2
CDR3-IMGT (germline)	299	304	6	6	0	0	100
Total	N/A	N/A	300	279	12	9	93


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  N 
                    Query_9597     5    GTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAAC  94
V  93.0% (279/300)  IGHV5-10-1*01  4    ........................................................................................G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  D  T  N  Y  S 
                    Query_9597     95   TACTGGATCAGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTGACACCAACTACAGC  184
V  93.0% (279/300)  IGHV5-10-1*01  94   ...........C...............................................................T.T......------  177
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N       

                                        ------------------------------------------------FR3-IMGT----------------------------------
                                         P  Y  S  P  S  L  Q  G  H  V  S  F  S  V  D  K  T  I  S  T  A  Y  L  Q  W  S  S  L  K  A 
                    Query_9597     185  CCGTACAGCCCGTCCCTCCAGGGCCACGTCAGCTTCTCAGTCGACAAGACCATCAGCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCC  274
V  93.0% (279/300)  IGHV5-10-1*01  178  ---............T....A..........C.A......CT......T.........................................  264
                                            Y  S  P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A 

                                        -----------------------><-----------CDR3-IMGT----------->                                 
                                         S  D  T  A  I  Y  Y  C  A  R  R  D  S  T  G  W  F  L  V  W  G  Q  G  T  L  V  T  V  S  P 
                    Query_9597     275  TCGGACACCGCCATTTATTACTGTGCGAGACGTGATAGTACTGGCTGGTTTCTGGTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCA  364
V  93.0% (279/300)  IGHV5-10-1*01  265  ..............G...............------------------------------------------------------------  294
                                         S  D  T  A  M  Y  Y  C  A  R                                                             
D  86.7% (13/15)    IGHD6-19*01    5    ----------------------------------....C.G........-----------------------------------------  19
J  97.1% (33/34)    IGHJ4*02       15   ---------------------------------------------------------..............................T..  47

                                         
                                         
                    Query_9597     365  G  365
J  97.1% (33/34)    IGHJ4*02       48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_23342

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TG	ACGATTTTTGGAGTGG	CCCCGTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACGATTTTTGGAGTGGCCCCGTCCTACTTTGACTCC	ARVTIFGVAPSYFDS	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	29	18	16	2	0	88.9
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	235	223	12	0	94.9


Alignments

                                      <----FR1-IMGT----><-------CDR1-IMGT------><--------------------FR2-IMGT-------------------
                                       L  S  C  T  V  S  G  G  S  H  T  R  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  W  I  G 
                    Query_9598   12   CTCTCCTGTACTGTCTCTGGTGGCTCCCACACTCGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGTGGATTGGG  101
V  94.9% (223/235)  IGHV4-59*01  58   ...A....C..................AT..G.A..........................C.............................  147
                                       L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G 

                                      --><-----CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-----
                                       Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S 
                    Query_9598   102  TATATCCATTACAGTGGGAGCACCAATTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAATCAGTTCTCC  191
V  94.9% (223/235)  IGHV4-59*01  148  ......T...................C.....C...............................................C.........  237
                                       Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S 

                                      -----------------------------------------------><-----------------CDR3-IMGT---------------
                                       L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  T  I  F  G  V  A  P  S  Y  F  D 
                    Query_9598   192  CTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTGACGATTTTTGGAGTGGCCCCGTCCTACTTTGAC  281
V  94.9% (223/235)  IGHV4-59*01  238  ......C................................................-----------------------------------  292
                                       L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                                     
D  100.0% (16/16)   IGHD3-3*01   6    ---------------------------------------------------------................-----------------  21
J  95.7% (45/47)    IGHJ4*02     2    --------------------------------------------------------------------------------..........  11

                                      -->                                  
                                       S  W  A  Q  G  T  L  V  T  V  S  S  
                    Query_9598   282  TCCTGGGCCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  95.7% (45/47)    IGHJ4*02     12   .A.....G.............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_23343

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            363     1e-102
IGHD3-22*01                                                                                           52.6    2e-11 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGACGGGGT	TATTACTATGATAATAGTGGTTATTACTAC	GGTCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACGGGGTTATTACTATGATAATAGTGGTTATTACTACGGTCTC	ARRRGYYYDNSGYYYGL	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  S  H  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9599   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGTAGTCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  97.2% (239/246)  IGHV4-4*02   49   ...............................G................A.........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  N  S  K 
                    Query_9599   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAACACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAACTCCAAG  180
V  97.2% (239/246)  IGHV4-4*02   139  ...............................G...................................................G......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  R  R  G  Y  Y  Y  D  N 
                    Query_9599   181  AACCAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCCATATATTACTGTGCGAGACGACGGGGTTATTACTATGATAAT  270
V  97.2% (239/246)  IGHV4-4*02   229  .......................C........................G.G...............------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  96.7% (29/30)    IGHD3-22*01  2    ---------------------------------------------------------------------------.............G.  16

                                      -------------------->                                  
                                       S  G  Y  Y  Y  G  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9599   271  AGTGGTTATTACTACGGTCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  96.7% (29/30)    IGHD3-22*01  17   ...............----------------------------------------  31
J  100.0% (35/35)   IGHJ4*02     14   --------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_23340

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           300     8e-84
IGHD4-17*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACGATGC	CTACGGT	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATGACGATGCCTACGGTCTTGACTAC	VRDDDAYGLDY	239	271	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	48	3	0	94.1
CDR2-IMGT	101	124	24	19	5	0	79.2
FR3-IMGT	125	238	114	105	9	0	92.1
CDR3-IMGT (germline)	239	246	8	7	1	0	87.5
Total	N/A	N/A	232	212	20	0	91.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  R  H  W  M  H  W  V  R  Q  A  P  G  K  G  P  V  C  V  A  R  I  
                    Query_9600   15   GTGCAGCCTCTGGATTCACCTTCAGTAGACACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCCGGTGTGCGTCGCACGTATCA  104
V  91.4% (212/232)  IGHV3-74*01  65   ............................CT.......................................T......G...T.......T.  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      K  S  D  G  S  Y  R  D  Y  A  D  F  V  K  G  R  F  T  I  S  R  D  N  A  K  N  I  L  Y  L  
                    Query_9600   105  AGAGTGATGGGAGTTACAGAGACTACGCGGACTTCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACATTCTGTATTTGC  194
V  91.4% (212/232)  IGHV3-74*01  155  .T............AG..C.AG...........C............................................CG......C...  244
                                      N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------CDR3-IMGT----------->             
                                      Q  M  N  S  L  S  A  D  D  T  A  V  Y  Y  C  V  R  D  D  D  A  Y  G  L  D  Y  W  G  Q  G  
                    Query_9600   195  AAATGAACAGTCTGAGTGCCGACGACACGGCTGTCTATTACTGTGTAAGAGATGACGATGCCTACGGTCTTGACTACTGGGGCCAGGGGA  284
V  91.4% (212/232)  IGHV3-74*01  245  ................A.....G...........G..........C......--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (7/7)     IGHD4-17*01  4    -------------------------------------------------------------.......----------------------  10
J  95.2% (40/42)    IGHJ4*02     7    ---------------------------------------------------------------------...................A.  27

                                                           
                                      T  L  V  T  L  S  S  
                    Query_9600   285  CCCTGGTCACCCTCTCCTCAG  305
J  95.2% (40/42)    IGHJ4*02     28   ...........G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_23341

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         319     2e-89
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	GGAGTCGTAATTAT	CATGGGAATT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGAGTCGTAATTATCATGGGAATTACTACTTTGACCAG	ARGSRNYHGNYYFDQ	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  A  Y  Y  S  L  N  W  I  R  R  T  P  L  K  G 
                    Query_9601     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGACAGTGCTTATTACTCCTTGAACTGGATCCGGCGGACACCACTGAAGGGC  90
V  90.8% (227/250)  IGHV4-30-2*01  49   ..................G....................AG.....G.GG........G..G...........A.C.....GG.......  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  G  G  A  T  Y  Y  N  P  S  L  E  S  R  V  T  L  S  V  D  R  S 
                    Query_9601     91   CTGGAGTGGATTGGCTACATCTATCATGGTGGGGCCACCTACTACAACCCGTCCCTCGAGAGTCGAGTCACCCTCTCAGTAGACCGGTCC  180
V  90.8% (227/250)  IGHV4-30-2*01  139  ..............G............A.....AG......................A..............A.A.........A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  R  N  Y  H  G 
                    Query_9601     181  AAGAACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGAGGGAGTCGTAATTATCATGGG  270
V  90.8% (227/250)  IGHV4-30-2*01  229  ...................A......C..........................G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  85.7% (12/14)    IGHD3-3*01     15   ----------------------------------------------------------------------.....G..T.....------  28

                                        ----------------->                                  
                                         N  Y  Y  F  D  Q  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_9601     271  AATTACTACTTTGACCAGTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTCAG  322
J  91.7% (44/48)    IGHJ4*02       1    ----...........T.C.............C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_23346

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*05                                                                                           322     2e-90
IGHD3-16*02                                                                                           12.2    30   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*05	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	AGACA	TTATCG	ACATTGGTTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTATTTGACTAT	ARHYRHWLFDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	223	17	0	92.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9602   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTGGTTTCTACTGGAGCTGGATTCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.9% (223/240)  IGHV4-59*05  49   .............................T............A...A...............C........G..G...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9602   91   TGGATTGGGAGTTTGTATTATAGTGGCAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCCAAGAAC  180
V  92.9% (223/240)  IGHV4-59*05  139  .........C..A.C...........G...............................................A...............  228
                                       W  I  G  R  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       H  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  H  W  L  F  D  Y 
                    Query_9602   181  CACTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACATTATCGACATTGGTTATTTGACTAT  270
V  92.9% (223/240)  IGHV4-59*05  229  ..G..C........G....G...T.......................G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD3-16*02  25   -----------------------------------------------------------------......-------------------  30
J  97.7% (42/43)    IGHJ4*02     6    ---------------------------------------------------------------------------------........C  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9602   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  97.7% (42/43)    IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_23347

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           333     1e-93
IGHD3-16*01                                                                                           12.2    31   
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	G	GGGGGA	TCGCCGCTCCTTTT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGGGGGGATCGCCGCTCCTTTTTGCTTTTGATATC	VKGGSPLLFAFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  M  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9603   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAATATGTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTAG  90
V  93.1% (230/247)  IGHV3-64*05  47   ..........................................G..GC.........................................G.  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  V  S  S  I  T  S  N  A  E  S  T  Y  Y  T  D  S  V  K  D  R  F  T  I  S  R  D  N  S  
                    Query_9603   91   AATCTGTCTCCTCTATTACTAGCAATGCGGAGAGCACATACTACACAGACTCAGTGAAGGACAGATTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (230/247)  IGHV3-64*05  137  ...A...T..AG......G...T....G..GT............G...............G.............................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  G  G  S  P  L  L  F  
                    Query_9603   181  AGAACACGCTGTATCTTCAAATGAGCAGTCTGAGACCTGAGGACACGGCTGTGTATTACTGTGTGAAGGGGGGATCGCCGCTCCTTTTTG  270
V  93.1% (230/247)  IGHV3-64*05  227  ..............G....................G...............................-----------------------  293
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V                          
D  100.0% (6/6)     IGHD3-16*01  18   --------------------------------------------------------------------......----------------  23
J  93.6% (44/47)    IGHJ3*02     4    ----------------------------------------------------------------------------------------..  5

                                      ---------->                                  
                                      A  F  D  I  G  G  Q  G  T  G  V  T  V  S  S  
                    Query_9603   271  CTTTTGATATCGGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  315
J  93.6% (44/47)    IGHJ3*02     6    ...........T..............AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_23344

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           308     4e-86
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ATTTCT	TATGGTTCGGGGAGT	CACGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAATTTCTTATGGTTCGGGGAGTCACGGGTGGTTCGACCCC	ARISYGSGSHGWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	220	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  K  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9604   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAAATACTTCTGGAGTTGGATCCGTCAGCCCCCCGGGAAGGGCCTGGAG  90
V  90.5% (220/243)  IGHV4-59*01  49   ...............................G.........T.GT....A......C........G........A........A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  I  G  T  T  S  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9604   91   TGGATTGGTTACATCTATTACATTGGGACCACCAGCTACAACCCCTCCCTCGAGAGTCGCGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  90.5% (220/243)  IGHV4-59*01  139  ........G..T..........G.....G.....A................A.......A..............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  A  S  V  T  A  A  D  R  A  M  Y  Y  C  A  R  I  S  Y  G  S  G  S  H  G 
                    Query_9604   181  CAGTTCTCCCTGAAGCTAGCGTCTGTGACCGCTGCGGACAGGGCCATGTATTACTGTGCGCGAATTTCTTATGGTTCGGGGAGTCACGGG  270
V  90.5% (220/243)  IGHV4-59*01  229  .................GAGC...................C....G..............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (15/15)   IGHD3-10*01  8    ---------------------------------------------------------------------...............------  22

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9604   271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (46/46)   IGHJ5*02     6    ..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_23345

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         383     1e-108
IGHD3-16*01                                                                                           12.2    34    
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	ATTATG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATGACTACTTTGACTAC	ARHYDYFDY	289	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	75	72	67	5	0	93.1
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	104	10	0	91.2
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	291	268	23	0	92.1


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  R  G  F  G  Y  S  F  T  S 
                    Query_9605     4    GTCCAGCTTGTGCAGTCTGGAGTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGTTTTGGATACAGCTTTACCAGC  93
V  92.1% (268/291)  IGHV5-10-1*01  4    ..G.....G.............C.........................................A.....C...................  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         F  W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  F  D  S  S  T  D  Y  T 
                    Query_9605     94   TTCTGGATCACTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAGAATTGATCCTTTTGACTCTTCTACCGACTATACG  183
V  92.1% (268/291)  IGHV5-10-1*01  94   .A........GC.........................................G..G.........AG........A....A....C.GC  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  Q  G  H  V  T  I  S  A  D  N  S  I  S  T  A  Y  L  H  L  S  S  L  K  A  S  D  T 
                    Query_9605     184  CCGTCATTCCAAGGCCACGTCACCATCTCAGCTGACAACTCCATCAGTACTGCCTACCTGCACTTGAGCAGCCTGAAGGCCTCGGACACC  273
V  92.1% (268/291)  IGHV5-10-1*01  184  .....C................................G........C..............G.G.........................  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><--------CDR3-IMGT-------->                                  
                                         G  M  Y  Y  C  A  R  H  Y  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9605     274  GGCATGTATTACTGTGCGAGACATTATGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  349
V  92.1% (268/291)  IGHV5-10-1*01  274  .C...................-------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                        
D  100.0% (6/6)     IGHD3-16*01    3    ----------------------......------------------------------------------------  8
J  100.0% (48/48)   IGHJ4*02       1    ----------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_23349

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           347     7e-98
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	C	GGGACTTATGC	CAACTCGCCA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGACTTATGCCAACTCGCCATACTGGTACTTCGATCTC	ASGTYANSPYWYFDL	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  S  S  S  Y  Y  W  G  W  I  R  R  P  P  G  K  G 
                    Query_9606   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCGGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCGGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*02  49   ...................C...........G.......A.................................A................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  T  G  S  A  Y  H  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_9606   91   CTGGAGTGGATTGCGAGTATCTATTATACTGGGAGCGCCTACCACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*02  139  .............G..............G.......A.....T...............................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       N  N  H  F  S  L  Q  L  S  S  V  T  D  A  D  T  A  V  Y  Y  C  A  S  G  T  Y  A  N  S  P 
                    Query_9606   181  AACAACCACTTCTCCCTGCAGCTGAGCTCTGTGACCGACGCAGACACGGCTGTCTATTACTGTGCGAGCGGGACTTATGCCAACTCGCCA  270
V  94.8% (235/248)  IGHV4-39*02  229  ..G...............A..................C...............G..............----------------------  296
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.9% (10/11)    IGHD3-16*01  20   ---------------------------------------------------------------------....G......----------  30

                                      ----------------->                                  
                                       Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9606   271  TACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  322
J  100.0% (52/52)   IGHJ2*01     2    ....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_295019

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     4e-93
IGHD1-26*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGTGAGA	GGGAGCTA	TTGTGGGGAGCAGTCAACGAGGATTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGTGAGAGGGAGCTATTGTGGGGAGCAGTCAACGAGGATTGCTTTGACTCC	ARDSERELLWGAVNEDCFDS	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  I  N  R  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9607   1    GGTCCCTGAGACTCTCCTGTGCAGCATCTGGATTCACCTTTATCAACCGTGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-23*01  47   .........................C................G..G.TA........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  
                    Query_9607   91   AGTGGGTCTCGAGTATAAGTGGTAGTGGTGGTAGCACATACTACGCAGATTCCGTCAAGGGCCGGTTCACCATCTCCAGAGACATTTCCA  180
V  92.4% (231/250)  IGHV3-23*01  137  ..........AGC...T................................C.....G............................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  R  T  M  Y  L  Q  M  N  S  L  R  D  D  D  T  A  V  Y  Y  C  A  R  D  S  E  R  E  L  L  
                    Query_9607   181  AGAGGACGATGTATCTGCAAATGAACAGCCTGAGAGACGACGACACGGCCGTATATTACTGTGCGAGAGATAGTGAGAGGGAGCTATTGT  270
V  92.4% (231/250)  IGHV3-23*01  227  ...AC...C...........................C...G.........................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD1-26*01  9    ------------------------------------------------------------------------------........----  16

                                      R3-IMGT------------------------>                                
                                      W  G  A  V  N  E  D  C  F  D  S  W  G  Q  G  S  L  V  T  V  S  S
                    Query_9607   271  GGGGAGCAGTCAACGAGGATTGCTTTGACTCCTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTC  334
J  95.2% (40/42)    IGHJ4*02     5    ----------------------........A..............C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_328395

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-16*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCT	TTACGTTTGGGGGAGCTATG	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTTTACGTTTGGGGGAGCTATGGACTACTTTGACTAC	ARGLFTFGGAMDYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  A  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_9608   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCGCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ...............................G.T..........................................A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  S  T  Y  S  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9608   91   CTGGAGTGGATTGGGTACATCTATTACCGTGGGAGCACGTACTCCAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ...........................A..........C....A..............................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  L  S  V  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  F  T  F  G  G 
                    Query_9608   181  AAGAACCAGTTGTCCGTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTATTGTGCGAGAGGCCTCTTTACGTTTGGGGGA  270
V  96.4% (241/250)  IGHV4-31*03  229  ...........C...C...........................................C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-16*01  10   ----------------------------------------------------------------------------..............  23

                                      GT------------------>                                  
                                       A  M  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9608   271  GCTATGGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  95.0% (19/20)    IGHD3-16*01  24   .T....-------------------------------------------------  29
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_278159

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           377     1e-106
IGHD1-1*01                                                                                            10.3    136   
IGHJ4*02                                                                                              31.5    1e-04 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	A	GAACG	GGTCCCCCCCTATCGCGACCTGGCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAAGAACGGGTCCCCCCCTATCGCGACCTGGCCTC	ARRTGPPLSRPGL	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	99	15	0	86.8
CDR3-IMGT (germline)	289	294	6	5	1	0	83.3
Total	N/A	N/A	293	267	26	0	91.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  A  
                    Query_9609   2    AGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCGCCA  91
V  91.1% (267/293)  IGHV1-46*01  2    ....G........G........G...............................................................A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  N  S  G  S  A  N  Y  
                    Query_9609   92   CCTATTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGCCTTGAGTGGATGGGAATAATCAACCCTAATAGTGGTAGCGCAAATTACG  181
V  91.1% (267/293)  IGHV1-46*01  92   G...C...................................G............................G.G........A...GC....  181
                                      S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  T  T  V  Y  L  D  L  S  R  L  G  S  N  G  
                    Query_9609   182  CACAGAAATTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGACCACAGTCTACTTGGACCTGAGCCGCCTGGGATCTAACGGCC  271
V  91.1% (267/293)  IGHV1-46*01  182  .......G........................................G..........A....G......A.....A.....G.G.A.A  271
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><--------------CDR3-IMGT-------------->                        
                                      P  A  I  Y  Y  W  A  R  R  T  G  P  P  L  S  R  P  G  L  W  G  P  G  I  L  V  T 
                    Query_9609   272  CGGCCATTTATTACTGGGCCAGAAGAACGGGTCCCCCCCTATCGCGACCTGGCCTCTGGGGCCCGGGAATCCTTGTCACC  351
V  91.1% (267/293)  IGHV1-46*01  272  .....G.G........T..G...---------------------------------------------------------  294
                                      T  A  V  Y  Y  C  A  R                                                          
D  100.0% (5/5)     IGHD1-1*01   11   ------------------------.....---------------------------------------------------  15
J  88.0% (22/25)    IGHJ4*02     14   -------------------------------------------------------........A.....C...G......  38


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_26644

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           324     7e-91
IGHD6-19*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	AATCC	ATATCAGTGGCTGGT	GTGGAG	GACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GAATCCATATCAGTGGCTGGTGTGGAGGACCAC	ESISVAGVEDH	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9610   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTCAGTTCCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGC  90
V  92.6% (225/243)  IGHV3-30*03  47   ........................C...................AG.....G.....................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  L  I  S  Y  N  G  S  N  M  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9610   91   AATGGGTGGCACTTATATCATATAATGGAAGTAATATGCACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.6% (225/243)  IGHV3-30*03  137  .G.........G...........G............AAT...................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  S  T  V  Y  L  Q  M  N  S  L  R  S  E  D  T  A  V  Y  Y  C  E  S  I  S  V  A  G  V  E  
                    Query_9610   181  AGAGCACAGTTTATCTCCAAATGAACAGCCTGAGAAGTGAGGACACGGCTGTGTATTACTGTGAATCCATATCAGTGGCTGGTGTGGAGG  270
V  92.6% (225/243)  IGHV3-30*03  227  ...A...GC.G.....G..................GC..........................---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  93.3% (14/15)    IGHD6-19*01  5    --------------------------------------------------------------------...G...........-------  19
J  95.0% (38/40)    IGHJ4*02     9    -----------------------------------------------------------------------------------------.  9

                                      ---->                                  
                                      D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9610   271  ACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCATCAG  309
J  95.0% (38/40)    IGHJ4*02     10   ..T...............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_26645

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            338     4e-95
IGHJ4*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	N/A	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	N/A	N/A	AGGCAATTGAACCCCAAAAT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAAGGCAATTGAACCCCAAAATCTTTGACTAC	VRRQLNPKIFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  E  N  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9611  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGAGAACTTTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (232/248)  IGHV3-7*03  47   .........................................AGT.G..A.........................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  M  R  Q  D  G  R  E  I  Y  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_9611  91   AGTGGGTGGCCAACATGCGACAAGATGGGCGTGAGATATACTATGTGGACTCTGTGAGGGGCCGATTCACTATCTCCAGAGACAACGCCA  180
V  93.5% (232/248)  IGHV3-7*03  137  ................AAAG........AA......A....................A............C...................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  R  Q  L  N  P  K  I  
                    Query_9611  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGTGAGAAGGCAATTGAACCCCAAAATCT  270
V  93.5% (232/248)  IGHV3-7*03  227  ....................................................G..........C....----------------------  294
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (44/44)   IGHJ4*01    5    ----------------------------------------------------------------------------------------..  6

                                     ------->                                  
                                     F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9611  271  TTGACTACTGGGGCCAAGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (44/44)   IGHJ4*01    7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_306819

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           339     2e-95
IGHD5-12*01                                                                                           16.1    2.3  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GTCCCCAGCGGCCCAATCGGGA	TGGCTACAATT	GTCTC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTCCCCAGCGGCCCAATCGGGATGGCTACAATTGTCTCCTTTTGATATC	AKSPAAQSGWLQLSPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  N  W  V  R  Q  S  P  G  K  G  L  
                    Query_9612   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGTCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-23*01  47   .........................................................G.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  R  G  G  T  I  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_9612   91   AGTGGGTCTCAGGAATTAGTGGTAGGGGTGGTACCATAAAGTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATCCCA  180
V  93.9% (232/247)  IGHV3-23*01  137  ............CT...........T.......G..C.T.C..C..........................................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      M  D  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  S  P  A  A  Q  S  G  
                    Query_9612   181  TGGACACACTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGTCCCCAGCGGCCCAATCGGGAT  270
V  93.9% (232/247)  IGHV3-23*01  227  A.A....G......C....................................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.9% (10/11)    IGHD5-12*01  11   -----------------------------------------------------------------------------------------.  11

                                      IMGT--------------------->                                  
                                      W  L  Q  L  S  P  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9612   271  GGCTACAATTGTCTCCTTTTGATATCTGGGGCCAGGGGACCCTGGTCACCGTCTCTTCAG  330
D  90.9% (10/11)    IGHD5-12*01  12   ......G...--------------------------------------------------  21
J  93.3% (42/45)    IGHJ3*02     6    ---------------...................A.....AA..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_306818

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           371     7e-105
IGHD6-19*01                                                                                           12.2    35    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	GCTCCAG	GGCTGG	GATT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCCAGGGCTGGGATTCTTTGACTAT	AAPGLGFFDY	292	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	66	5	0	93
CDR1-IMGT	79	102	24	18	6	0	75
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	104	10	0	91.2
CDR3-IMGT (germline)	292	294	3	3	0	0	100
Total	N/A	N/A	287	262	25	0	91.3


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  A  S  G  N  T  L  T  N  
                    Query_9613   8    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCGTCAGTGAAAGTTGCCTGCAAGGCATCCGGAAACACCCTCACCAACA  97
V  91.3% (262/287)  IGHV1-46*01  5    ...................G.......................C........G...T.............T...T.....T......G.T  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      N  F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  N  K  T  T  Y  A  
                    Query_9613   98   ACTTCATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTAATAAGACAACCTATGCAC  187
V  91.3% (262/287)  IGHV1-46*01  95   ...AT..................................................................GG..GC....G...C....  184
                                      Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  R  L  T  M  T  R  V  T  S  T  R  T  V  Y  M  E  L  S  N  L  R  S  E  D  T  
                    Query_9613   188  AGAAGTTCCAGGGCAGACTGACCATGACTAGGGTCACGTCCACGAGAACAGTCTACATGGAGCTGAGCAACCTGAGATCTGAGGACACGG  277
V  91.3% (262/287)  IGHV1-46*01  185  .................G.C........C....A............C......................G....................  274
                                      Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><----------CDR3-IMGT--------->                                  
                                      A  V  Y  C  C  A  A  P  G  L  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_9613   278  CCGTGTATTGCTGCGCGGCTCCAGGGCTGGGATTCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  355
V  91.3% (262/287)  IGHV1-46*01  275  .........A...T...-------------------------------------------------------------  291
                                      A  V  Y  Y  C  A                                                              
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------......------------------------------------------------  18
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------.........C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_155518

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           388     5e-110
IGHD4-17*01                                                                                           18.0    0.67  
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGG	CTACGGTGA	GTCCGAGTAGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTCTGGACGTC	ARDLATVSPSSFYYGLDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  T  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_9614   2    CAGCTGGTGCAGTCTGGAACTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAT  91
V  92.8% (269/290)  IGHV1-18*01  7    ..................G....G.............................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  K  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_9614   92   GGTATTACCTGGGTGCGGCAGGCCCCTGGACAGGGACTTAAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  181
V  92.8% (269/290)  IGHV1-18*01  97   .....C.G.........A..............A..G...G.........................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  L  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  V  D  D  T  A 
                    Query_9614   182  ATGGTCCGGGACAGAGTCACCTTGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGAGTTGACGACACGGCC  271
V  92.8% (269/290)  IGHV1-18*01  187  .A.C...A..G..........A......C....................C..........C..............TC.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  S  F  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T 
                    Query_9614   272  GTGTATTACTGTGCGAGAGATCTGGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACC  361
V  92.8% (269/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------.........--------------------------------------------------------  12
J  98.1% (51/52)    IGHJ6*02     11   -----------------------------------------------..........A................................  53

                                               
                                       V  S  S 
                    Query_9614   362  GTCTCCTCA  370
J  98.1% (51/52)    IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_26641

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           343     2e-96
IGHD3-3*01                                                                                            21.8    0.047
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGGA	TTTTGGAGTGG	AGGACTCTGGAGTGGTCCGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGGATTTTGGAGTGGAGGACTCTGGAGTGGTCCGCCTTGACTAC	ARVDFGVEDSGVVRLDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	96	18	0	84.2
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	253	34	0	88.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  T  S  G  Y  P  F  R  N  Y 
                    Query_9615   2    CAGCTGGTGCAGTCTGGAGCTGAGGTTAAGAAGCCTGGCGCCTCAGTGAAGGTCGCCTGCAAGACTTCTGGTTACCCCTTTAGGAATTAC  91
V  88.2% (253/287)  IGHV1-18*04  7    ..........................G...........G...............T........G...........A......CC.GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  G  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  V  S  G  Y  N  G  N  T  N  Y  A  E 
                    Query_9615   92   GGTGTCGGTTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGGTCAGCGGTTACAATGGGAACACAAACTATGCAGAG  181
V  88.2% (253/287)  IGHV1-18*04  97   ...A..A.C..........................G..................A......C.........T...............C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  F  E  D  R  V  T  M  I  T  H  T  S  T  T  T  V  F  M  E  L  R  G  L  R  Y  D  D  T  A 
                    Query_9615   182  AATTTCGAGGACAGAGTCACAATGATCACACACACCTCCACGACCACAGTGTTCATGGAACTGAGGGGGCTGAGATATGACGACACGGCC  271
V  88.2% (253/287)  IGHV1-18*04  187  ..GC..C...G.........C....C....G....A.......G.....CC.A......G......A.C.......C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------CDR3-IMGT-------------------->                           
                                       V  Y  Y  C  A  R  V  D  F  G  V  E  D  S  G  V  V  R  L  D  Y  W  G  Q  G  A  L  V  S  V 
                    Query_9615   272  GTCTATTACTGTGCGAGGGTGGATTTTGGAGTGGAGGACTCTGGAGTGGTCCGCCTTGACTACTGGGGCCAGGGAGCCCTGGTCAGCGTC  361
V  88.2% (253/287)  IGHV1-18*04  277  ..G..............-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  100.0% (11/11)   IGHD3-3*01   11   -----------------------...........--------------------------------------------------------  21
J  92.9% (39/42)    IGHJ4*02     7    -------------------------------------------------------....................A.........C....  41

                                             
                                       S  S  
                    Query_9615   362  TCGTCAG  368
J  92.9% (39/42)    IGHJ4*02     42   ..C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_26642

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9616   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (226/248)  IGHV3-21*01  47   ............................T............AG...C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  G  
                    Query_9616   91   AGTGGGTCTCATCCATCAGTAGTAGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  91.1% (226/248)  IGHV3-21*01  137  ................T........T...AGT......T.C..C..A......G..A..............................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_9616   181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  91.1% (226/248)  IGHV3-21*01  227  ....C..................AA...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9616   271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_26643

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           316     2e-88
IGHD3-3*01                                                                                            21.8    0.044
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-3*01	IGHJ4*02	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGGGTCCCTTTCGCATG	TTGGAGTGGTT	GTAGGTGGTCAGCGCGGGGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGGGTCCCTTTCGCATGTTGGAGTGGTTGTAGGTGGTCAGCGCGGGGTTTTTGACTGC	ARDPGPFRMLEWL*VVSAGFLTA	249	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	256	8	6	2	0	75
Total	N/A	N/A	256	229	27	0	89.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  D  Y  Y  M  I  W  V  R  Q  A  P  G  K  G  L  
                    Query_9617   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTGACTACTATATGATCTGGGTCCGCCAGGCTCCCGGGAAGGGGCTGG  90
V  89.5% (229/256)  IGHV3-49*04  47   ....................A....T..........C...TG....T..TGC.....G..................A.............  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  L  G  F  I  R  N  K  A  N  G  G  T  T  E  *  T  T  S  V  K  G  G  F  T  I  S  R  D  
                    Query_9617   91   AGTGGCTAGGTTTCATTAGAAACAAAGCTAATGGTGGGACAACAGAATAGACCACGTCTGTGAAAGGCGGATTCACAATCTCAAGAGATG  180
V  89.5% (229/256)  IGHV3-49*04  137  .....G...............G.......T...................CG..G..............A.......C.............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  N  S  I  T  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  G  P  F  
                    Query_9617   181  ATTCCAACAGCATCACCTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCCGTGTATTACTGTGCGAGAGATCCGGGTCCCTTTC  270
V  89.5% (229/256)  IGHV3-49*04  227  .......A......G........................A.A....G.....A...............A.T.....--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 

                                      --------CDR3-IMGT---------------------------->                                  
                                      R  M  L  E  W  L  *  V  V  S  A  G  F  L  T  A  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_9617   271  GCATGTTGGAGTGGTTGTAGGTGGTCAGCGCGGGGTTTTTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  350
D  100.0% (11/11)   IGHD3-3*01   13   -----...........----------------------------------------------------------------  23
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------.......A...............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_155514

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     9e-100
IGHD3-22*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGCCCACCGATTAATCTTC	GATAGAAGTGGTTATTACT	TGCGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGCCCACCGATTAATCTTCGATAGAAGTGGTTATTACTTGCGCGAC	ASAHRLIFDRSGYYLRD	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9618   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGCAAGGGC  90
V  95.6% (237/248)  IGHV4-31*03  49   ...................................................................................G......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  F  I  S  G  G  T  S 
                    Query_9618   91   CTGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCGACTACAACCCGTCCCTCAAGAGTCGAGTTTTCATATCAGGAGGCACGTCT  180
V  95.6% (237/248)  IGHV4-31*03  139  ...............T.......................T.............................AC........T..A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  S  A  H  R  L  I  F  D 
                    Query_9618   181  AAGAACCAGTTCTCCCTCAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCATTTATTACTGTGCGAGCGCCCACCGATTAATCTTCGAT  270
V  95.6% (237/248)  IGHV4-31*03  229  .................G.A...............................G.G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  94.7% (18/19)    IGHD3-22*01  11   ---------------------------------------------------------------------------------------...  13

                                      MGT-------------------->                                  
                                       R  S  G  Y  Y  L  R  D  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9618   271  AGAAGTGGTTATTACTTGCGCGACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  328
D  94.7% (18/19)    IGHD3-22*01  14   ..T.............------------------------------------------  29
J  97.2% (35/36)    IGHJ4*02     13   ----------------------..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_155515

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           341     5e-96
IGHD1-20*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTTCGGAT	TATAACTGGAA	ACGTGGGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTTCGGATTATAACTGGAAACGTGGGGGCTTTGACTAC	ATSDYNWKRGGFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9619   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAATTACGAGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTAG  90
V  94.3% (232/246)  IGHV3-48*03  47   .............................................G...T..A................................G..G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  Y  I  G  G  S  G  S  P  I  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_9619   91   ATTGGGTTTCATACATTGGCGGTAGTGGTAGTCCCATACACTACGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  94.3% (232/246)  IGHV3-48*03  137  .G...............A.TA...........A.....T................................A..................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  S  D  Y  N  W  K  R  
                    Query_9619   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTACTATTGTGCGACTTCGGATTATAACTGGAAACGTG  270
V  94.3% (232/246)  IGHV3-48*03  227  .......................................................T..C.......------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD1-20*01  3    --------------------------------------------------------------------------...........-----  13

                                      ------------->                                  
                                      G  G  F  D  Y  W  G  Q  G  T  L  V  T  V  A  P  
                    Query_9619   271  GGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCGCCCCAG  318
J  95.5% (42/44)    IGHJ4*02     5    ----.....................................T..T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_306811

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           263     2e-72
IGHD3-16*01                                                                                           12.2    33   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GATCTCCCATTG	TTATGA	GCGGGGCACGGTTTTCGAGTCGGGCTCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTCCCATTGTTATGAGCGGGGCACGGTTTTCGAGTCGGGCTCCCCTTGACCAC	ARSPIVMSGARFSSRAPLDH	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	94	20	0	82.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	207	39	0	84.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  K  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9620   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACCTTCACCAAACATGCCCTGAGTTGGGTCCGACAGGCTCCAGGGAAGGGACTAC  90
V  84.1% (207/246)  IGHV3-23*01  47   ...............................A........T.G..GCT.....A....C........C.................G..GG  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  T  I  S  G  D  G  R  A  T  S  T  L  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9620   91   AGTGGGTCTCAACTATTAGTGGTGATGGTCGTGCCACGTCCACCTTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  84.1% (207/246)  IGHV3-23*01  137  ...........G...........AG....G..AG...A.A.TA.GC............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      I  N  T  L  F  L  Q  L  T  S  L  R  V  D  D  S  A  L  Y  Y  C  A  R  S  P  I  V  M  S  G  
                    Query_9620   181  TCAACACTTTATTTCTGCAACTGACCAGCCTGAGAGTCGACGACTCGGCCCTCTACTATTGTGCGAGATCTCCCATTGTTATGAGCGGGG  270
V  84.1% (207/246)  IGHV3-23*01  227  AG.....GC.G.A.......A...A...........C...G...A.....G.A..T..C.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-16*01  4    ------------------------------------------------------------------------------......------  9

                                      R3-IMGT------------------------>                                  
                                      A  R  F  S  S  R  A  P  L  D  H  W  G  Q  G  T  L  V  T  V  T  S  
                    Query_9620   271  CACGGTTTTCGAGTCGGGCTCCCCTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCACTTCAG  336
J  92.9% (39/42)    IGHJ4*02     7    ------------------------.....T.............................T.C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_306810

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD6-25*01                                                                                           14.1    9.4   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTC	ARQSSAGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  S  S  G  Y  D  F  L  D  Y
                    Query_9621   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGAGTTCTGGATACGACTTTCTCGACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ..............................A.....C...........................G...........AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_9621   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G.......................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9621   181  GTCATTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGAACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  ...C.........................................C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  M  V  T  V  S  S
                    Query_9621   271  CAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTC  360
V  95.2% (277/291)  IGHV5-51*01  276  ..T..................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------...............................C...............  61

                                       
                                       
                    Query_9621   361  A  361
J  97.9% (47/48)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_155510

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           338     5e-95
IGHD1-26*01                                                                                           10.3    123  
IGHJ6*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAAGCTCTTCGGTTA	ATAGT	N/A	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCAAGCTCTTCGGTTAATAGTTACGACTACTACGGTATGGACGTC	ARSSSSVNSYDYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9622   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAGTAATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGACTGG  90
V  93.5% (232/248)  IGHV3-48*03  47   ....................................C...C....G.................................G.....G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  A  V  F  I  S  V  S  G  R  N  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9622   91   AGTGGGCTGTATTCATTAGTGTTAGTGGTAGGAACATATACTACGCGGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  93.5% (232/248)  IGHV3-48*03  137  ......T.TC..A.......AG.........T.C............A.................A.........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  S  S  S  V  N  S  
                    Query_9622   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCTGTTTATTACTGTGCGAGATCAAGCTCTTCGGTTAATAGTT  270
V  93.5% (232/248)  IGHV3-48*03  227  ........................................G...........................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  4    ------------------------------------------------------------------------------------.....-  8
J  96.5% (55/57)    IGHJ6*02     6    -----------------------------------------------------------------------------------------.  6

                                      GT-------------------->                                 
                                      Y  D  Y  Y  G  M  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_9622   271  ACGACTACTACGGTATGGACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  326
J  96.5% (55/57)    IGHJ6*02     7    ..T...........................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_155511

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           371     6e-105
IGHD3-10*01                                                                                           19.9    0.15  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	TTCG	CTATGTTTCGGGG	TTCAGGG	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCATTCGCTATGTTTCGGGGTTCAGGGGGTATGGACGTC	AFAMFRGSGGMDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	241	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9623   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  98.4% (241/245)  IGHV3-74*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  K  S  D  G  S  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9623   91   TGTGGGTCTCACGTATTAAGAGTGATGGGAGTAGCACATACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (241/245)  IGHV3-74*01  137  ...................T..................AG..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  F  A  M  F  R  G  S  G  
                    Query_9623   181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCATTCGCTATGTTTCGGGGTTCAGGGG  270
V  98.4% (241/245)  IGHV3-74*01  227  .......G.........................................................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.3% (12/13)    IGHD3-10*01  7    ---------------------------------------------------------------------.....G.......--------  19
J  100.0% (45/45)   IGHJ6*02     18   -----------------------------------------------------------------------------------------.  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9623   271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (45/45)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_155512

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*02                                                                                            391     6e-111
IGHD3-9*01                                                                                            27.6    8e-04 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*02	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TTTTC	TTACGATATTTTGTCTG	CCAACACA	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTTTTCTTACGATATTTTGTCTGCCAACACAATGGACGTC	AFSYDILSANTMDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	268	18	0	93.7


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  L  T  G  Y
                    Query_9624  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTAAGGCTTCTGGATACAGCCTCACCGGCTA  90
V  93.7% (268/286)  IGHV1-2*02  6    ..................G.........................................C................C.T..........  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       S  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  V  N  S  G  A  T  N  Y  A  Q
                    Query_9624  91   CTCTGTGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATTAATGTTAACAGTGGCGCCACAAATTATGCGCA  180
V  93.7% (268/286)  IGHV1-2*02  96   ..A.A....................................................C..CCC.........T.G......C.....A..  185
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  Q  G  G  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  T  S  D  D  T  A
                    Query_9624  181  GAAGTTTCAGGGCGGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCGTACATGGAGCTGAGCAGGCTGACATCTGACGACACGGC  270
V  93.7% (268/286)  IGHV1-2*02  186  .............A.....................................C......................G...............  275
                                       K  F  Q  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                     ------------><----------------CDR3-IMGT--------------->                                 
                                       V  Y  Y  C  A  F  S  Y  D  I  L  S  A  N  T  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9624  271  CGTCTATTACTGTGCGTTTTCTTACGATATTTTGTCTGCCAACACAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  358
V  93.7% (268/286)  IGHV1-2*02  276  ...G............------------------------------------------------------------------------  291
                                       V  Y  Y  C  A                                                                         
D  94.1% (16/17)    IGHD3-9*01  4    ---------------------.............A...--------------------------------------------------  20
J  100.0% (42/42)   IGHJ6*02    21   ----------------------------------------------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_155513

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            350     8e-99
IGHD6-25*01                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGGTCTCATGG	GCAGCG	N/A	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTCTCATGGGCAGCGGACTAC	ARDGVSWAADY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  I  Y  Y  M  R  W  V  R  Q  A  P  G  K  G  L  
                    Query_9625   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCATCTATTACATGAGATGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-7*01   47   ...........................................T.G.....GG.....C....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  K  G  D  G  S  E  K  Y  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_9625   91   AGTGGGTGGCCAGCATAAAGGGAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (237/250)  IGHV3-7*01   137  ............A.......CA...................................A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  V  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  V  S  W  A  A  
                    Query_9625   181  AGAATTCACTGTATCTGCAAGTGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGATGGGGTCTCATGGGCAGCGG  270
V  94.8% (237/250)  IGHV3-7*01   227  ....C...............A...............................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD6-25*01  8    -----------------------------------------------------------------------------------......-  13
J  100.0% (40/40)   IGHJ4*02     9    -----------------------------------------------------------------------------------------.  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9625   271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (40/40)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_159426

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9626   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   .........................................C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9626   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  P  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_9626   181  AAGAACCAGTTCTCCCTGAAGCTGAGCCCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ...........................T........................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9626   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_50668

Length=411
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           402     3e-114
IGHD3-22*01                                                                                           33.4    2e-05 
IGHJ4*01                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	ACGT	TATTACTACGATAGTAGTGCTTA	CCGCGAGGAGTATCCTTTCATTTTTCTGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAACGTTATTACTACGATAGTAGTGCTTACCGCGAGGAGTATCCTTTCATTTTTCTGAACGACTAC	ARERYYYDSSAYREEYPFIFLNDY	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	274	17	0	94.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  Q  P  G  E  S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y
                    Query_9627   1    GCAGCTGGTGCAGTCTGGGGGAGGCTTGGTACAGCCTGGAGAGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGATTA  90
V  94.2% (274/291)  IGHV3-48*03  6    ..........G..............................G...........................................AG...  95
                                        Q  L  V  E  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  I  S  L  I  S  S  D  G  D  D  I  Y  Y  A  D
                    Query_9627   91   TGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGATTTCACTCATTAGTAGTGATGGTGATGACATTTACTACGCAGA  180
V  94.2% (274/291)  IGHV3-48*03  96   ..............................................G.....TA..........AG....AG.AC...A...........  185
                                        E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  V  N  S  L  R  A  E  D  T  A
                    Query_9627   181  CTCTGTGAAGGGCCGATTCACAATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAGTGAACAGCCTGAGAGCCGAGGACACGGC  270
V  94.2% (274/291)  IGHV3-48*03  186  .....................C.......................................A............................  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><-------------------------------CDR3-IMGT------------------------------>     
                                        V  Y  Y  C  A  R  E  R  Y  Y  Y  D  S  S  A  Y  R  E  E  Y  P  F  I  F  L  N  D  Y  W  G
                    Query_9627   271  TGTTTATTACTGTGCGAGGGAACGTTATTACTACGATAGTAGTGCTTACCGCGAGGAGTATCCTTTCATTTTTCTGAACGACTACTGGGG  360
V  94.2% (274/291)  IGHV3-48*03  276  ..................A..---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  91.3% (21/23)    IGHD3-22*01  2    -------------------------........T..........G...------------------------------------------  24
J  97.5% (39/40)    IGHJ4*01     9    -------------------------------------------------------------------------------...........  19

                                                                   
                                        H  G  T  L  V  T  V  S  S  
                    Query_9627   361  CCACGGAACCCTGGTCACCGTCTCCTCAG  389
J  97.5% (39/40)    IGHJ4*01     20   ...A.........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40288536


Query= Query_186769

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           341     5e-96
IGHD3-3*01                                                                                            10.3    122  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTCTTC	TTTTT	CTCCAAGAGAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTCTTCTTTTTCTCCAAGAGAGAGTCTACTACTTTGACTAC	ARSLLFLQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  K  S  G  G  Y  Y  W  S  W  V  R  Q  H  P  G  K  G 
                    Query_9628   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAAGAGTGGTGGCTACTACTGGAGCTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  94.0% (233/248)  IGHV4-31*03  49   ..................................C.....GC........T...............A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  A  Y  Y  N  A  S  L  K  S  *  V  T  I  S  V  A  T  S 
                    Query_9628   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCGCCTACTACAACGCGTCCCTCAAGAGTTGAGTTACAATATCAGTGGCCACGTCT  180
V  94.0% (233/248)  IGHV4-31*03  139  ..................................G.A...........C..............C.......C........A.A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  S  L  L  F  L  Q  E 
                    Query_9628   181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACTGTCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTCTTCTTTTTCTCCAAGAG  270
V  94.0% (233/248)  IGHV4-31*03  229  .....................C....C..........C..............................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD3-3*01   10   ----------------------------------------------------------------------------.....---------  14

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9628   271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_186768

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           12.2    37    
IGHJ3*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ATAGCGGAAACTACT	TATGTTAGAGACTC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGATAGCGGAAACTACTTATGTTAGAGACTCTGATGCTTTTGATATC	ARDRIAETTYVRDSDAFDI	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	106	8	0	93
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	279	17	0	94.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  N 
                    Query_9629   1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTCAAT  90
V  94.3% (279/296)  IGHV1-18*01  1    ...G.T.................................................................T..............T.CC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  F  I  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 
                    Query_9629   91   AACTATGGTTTCATCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTAT  180
V  94.3% (279/296)  IGHV1-18*01  91   .G.......A...G............................................................................  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  K  G  R  F  T  M  T  T  D  T  S  T  S  T  A  S  V  E  L  R  S  L  R  S  D  D 
                    Query_9629   181  GCACAGAAATTCAAGGGCAGATTCACCATGACCACGGACACATCCACGAGCACAGCCTCCGTGGAGCTGAGGAGCCTGAGATCTGACGAC  270
V  94.3% (279/296)  IGHV1-18*01  181  ........GC..C........G.............A......................A.A.............................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  V  Y  Y  C  A  R  D  R  I  A  E  T  T  Y  V  R  D  S  D  A  F  D  I  W  G  Q  G  T 
                    Query_9629   271  ACGGCCGTGTATTACTGCGCGAGAGATCGGATAGCGGAAACTACTTATGTTAGAGACTCTGATGCTTTTGATATCTGGGGCCAAGGGACA  360
V  94.3% (279/296)  IGHV1-18*01  271  .................T........----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  80.0% (12/15)    IGHD1-26*01  4    ------------------------------....T..G.G.....---------------------------------------------  18
J  100.0% (50/50)   IGHJ3*02     1    -----------------------------------------------------------...............................  31

                                                         
                                       M  V  T  V  S  S  
                    Query_9629   361  ATGGTCACCGTCTCTTCAG  379
J  100.0% (50/50)   IGHJ3*02     32   ...................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_50662

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           339     2e-95
IGHD6-13*01                                                                                           21.8    0.041
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  L  S  G  G  S  I  S  S  G  G  F  Y  W  N  W  I  R  Q  H  P  G  K  G  
                    Query_9630   4    CCCTGAGACTCTCCTGCACTCTCTCTGGTGGCTCCATCAGCAGTGGTGGTTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  93.6% (233/249)  IGHV4-31*03  50   .....TCC...A........G..............................A........G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  H  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  
                    Query_9630   94   TGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCTA  183
V  93.6% (233/249)  IGHV4-31*03  140  ....................T..................A.................................A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V  
                    Query_9630   184  AGAACCAATTCTCCCTGAGGCTGACTTCAGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTAG  273
V  93.6% (233/249)  IGHV4-31*03  230  .......G..........A.....GC..T............................A...........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  11   -----------------------------------------------------------------------...........--------  21

                                      ---------------->                                  
                                      G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9630   274  GCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
J  98.0% (48/49)    IGHJ3*01     2    --.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_186764

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9631   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9631   91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_9631   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  95.5% (231/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9631   271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_50667

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           318     6e-89
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCCGCCGC	TTCGGGGA	CTTGACCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCCGCCGCTTCGGGGACTTGACCCTTGACTAC	ARDGRRFGDLTLDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	14	7	0	66.7
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  L  S  V  S  S  N  Y  M  S  W  F  R  Q  P  P  G  K  G  L  
                    Query_9632   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGGCTCAGCGTCAGTAGCAACTACATGAGCTGGTTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  91.1% (225/247)  IGHV3-53*01  47   ........................C.......T...C.........................G........G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  L  Y  S  G  G  V  T  F  F  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  R  
                    Query_9632   91   AGTGGGTCTCAGTTCTTTATAGTGGAGGAGTCACGTTCTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGATTCCAGGA  180
V  91.1% (225/247)  IGHV3-53*01  137  ..............A.......C..T..TAG...A.A..A........................................A......A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  F  C  A  R  D  G  R  R  F  G  D  L  
                    Query_9632   181  ACACATTGTATCTTCAAATGAACAACCTCAGAGCCGAGGACACGGCCGTCTATTTCTGTGCGAGAGATGGCCGCCGCTTCGGGGACTTGA  270
V  91.1% (225/247)  IGHV3-53*01  227  ....GC..................G...G....................G....A............-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  13   -----------------------------------------------------------------------------........-----  20

                                      ---------->                                  
                                      T  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9632   271  CCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (42/42)   IGHJ4*02     7    ---..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_50666

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           313     2e-87
IGHD6-19*01                                                                                           33.4    1e-05
IGHJ3*01                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-19*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTGGGAAACCC	GGTATAGCACTGGCTGGTAC	GACCG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTGGGAAACCCGGTATAGCACTGGCTGGTACGACCGTTTTGATCTT	ARDWETRYSTGWYDRFDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  G  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9633   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTCAGCGGATATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-48*03  47   ......................................T....TA.T...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  N  S  A  A  V  T  R  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9633   91   AATGGATTTCATACATCAATAGTGCCGCTGTCACCAGGCACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  90.0% (225/250)  IGHV3-48*03  137  .G...G..........T.G....AGT.G.AGT....TAT...............................................G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      N  N  A  L  Y  L  Q  M  H  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  D  W  E  T  R  Y  S  
                    Query_9633   181  ACAACGCACTGTATCTGCAAATGCACAGCCTGCGACCCGAGGACACGGCTGTTTATTATTGTGCGAGAGATTGGGAAACCCGGTATAGCA  270
V  90.0% (225/250)  IGHV3-48*03  227  .G...T.................A........A..G......................C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.0% (19/20)    IGHD6-19*01  2    ---------------------------------------------------------------------------------.........  10

                                      IMGT--------------------->                              
                                      T  G  W  Y  D  R  F  D  L  W  G  Q  G  T  T  V  T  V  S 
                    Query_9633   271  CTGGCTGGTACGACCGTTTTGATCTTTGGGGCCAGGGGACAACGGTCACCGTCTCT  326
D  95.0% (19/20)    IGHD6-19*01  11   G..........---------------------------------------------  21
J  90.0% (36/40)    IGHJ3*01     7    ----------------.......G.C........A.......T.............  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_50665

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ2*01                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTACTATAATCCTAGTGGTTTTTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACTATAATCCTAGTGGTTTTTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGFYGYWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  N  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9634   1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAATAATTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ...........................G............G..G...C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  D  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9634   91   TGGATTGGGGACATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  .........T.T..............................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  A  Y  Y  C  A  R  D  Y  Y  N  P  S  G  F  Y 
                    Query_9634   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGCTTATTACTGTGCGAGAGATTACTATAATCCTAGTGGTTTTTAC  270
V  96.3% (236/245)  IGHV4-59*01  229  ..............................................TG.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.0% (21/25)    IGHD3-22*01  4    -----------------------------------------------------------------.......G..AG........A....  28

                                      -------------------->                                  
                                       G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9634   271  GGGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  325
J  100.0% (52/52)   IGHJ2*01     2    ---....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_50664

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           330     1e-92
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCGCCGGGACG	GTGGTAATTAC	CCTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCGCCGGGACGGTGGTAATTACCCTATTGACTAC	ARPRRDGGNYPIDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  T  D  G  Y  Y  W  S  W  I  R  Q  F  P  G  K  G 
                    Query_9635   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGAACTGATGGTTACTACTGGAGCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  92.4% (230/249)  IGHV4-31*03  49   .........................................C.G..G............................CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  Y  H  T  G  S  T  Y  Y  T  P  S  V  R  G  R  V  T  M  S  V  D  T  S 
                    Query_9635   91   CTGGAGTGGATTGGGTTCATCTATCACACTGGGAGCACCTACTACACCCCGTCCGTCCGGGGTCGAGTCACCATGTCAGTGGACACGTCT  180
V  92.4% (230/249)  IGHV4-31*03  139  ................A.......T...G.................A.......C..AA.A.......T.....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  R  R  D  G  G  N 
                    Query_9635   181  AAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGACCTCGCCGGGACGGTGGTAAT  270
V  92.4% (230/249)  IGHV4-31*03  229  ...................A.....G...........................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD3-22*01  18   ----------------------------------------------------------------------------------.....T..  25

                                      -------------->                                  
                                       Y  P  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9635   271  TACCCTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
D  90.9% (10/11)    IGHD3-22*01  26   ...----------------------------------------------  28
J  100.0% (42/42)   IGHJ4*02     7    -------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_192061

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           297     8e-83
IGHD2-21*01                                                                                           19.9    0.16 
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-21*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTGTTCCAAT	TGGTGGTTATTGGTAT	CCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTGTTCCAATTGGTGGTTATTGGTATCCCTTCGATCCC	ARDRVPIGGYWYPFDP	255	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	123	36	16	8	12	44.4
FR3-IMGT	124	254	114	105	9	0	92.1
CDR3-IMGT (germline)	255	262	8	8	0	0	100
Total	N/A	N/A	262	228	22	12	87


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9636   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTACTTATAGTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  87.0% (228/262)  IGHV3-30*04  47   .....................................C.......GC...GC......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----CDR2-IMGT----><--------------------------------------------------------
                                      E  W  V  A  V  I  A  Y  D  G  N  T  Y  Y  A  D  S  Y  Y  A  D  S  V  K  G  R  F  T  I  S  
                    Query_9636   91   AGTGGGTGGCAGTTATTGCATATGATGGCAATACATACTACGCAGACTCCTACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCA  180
V  87.0% (228/262)  IGHV3-30*04  137  ................AT..........A.G..------------.TAAA..........................A.............  214
                                      E  W  V  A  V  I  S  Y  D  G  S              N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  

                                      ----FR3-IMGT-------------------------------------------------------------><---------------
                                      R  D  N  S  R  D  T  L  Y  L  Q  M  N  R  L  R  P  E  D  T  A  V  Y  Y  C  A  R  D  R  V  
                    Query_9636   181  GAGACAATTCCAGGGACACCCTCTATCTGCAAATGAACCGCCTGAGACCTGAGGACACCGCTGTCTATTACTGTGCGAGAGATCGTGTTC  270
V  87.0% (228/262)  IGHV3-30*04  215  ............A.A....G..G...............A........G..........G.....G.................--------  296
                                      R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R           

                                      ----CDR3-IMGT------------------>                                  
                                      P  I  G  G  Y  W  Y  P  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9636   271  CAATTGGTGGTTATTGGTATCCCTTCGATCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  87.5% (14/16)    IGHD2-21*01  10   ----.......G....C...----------------------------------------------  25
J  97.7% (42/43)    IGHJ5*02     9    -----------------------.....C.....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_253453

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD1-1*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAGGGGG	CAACTGG	GACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTAC	ARGGGNWDPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	269	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  Y
                    Query_9637   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCTA  90
V  93.4% (269/288)  IGHV5-51*01  6    .................................................................G............C......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  V  V  Y  P  D  D  S  D  A  R  Y  S  P
                    Query_9637   91   CTGGATCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGGTCGTCTATCCTGATGACTCTGATGCCAGATACAGCCC  180
V  93.4% (269/288)  IGHV5-51*01  96   ..................C..G.........A..........G.........A..A.........G..........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  I  T  I  S  A  D  K  S  I  S  T  A  F  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_9637   181  GTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCAGCACTGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (269/288)  IGHV5-51*01  186  .......C.......GG...............................C....A...........G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  G  N  W  D  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9637   271  CATCTATTACTGTGCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.4% (269/288)  IGHV5-51*01  276  ...G..............-----------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------.......-------------------------------------------------  11
J  100.0% (44/44)   IGHJ4*02     5    ---------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_112058

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*02                                                                                            391     6e-111
IGHD3-9*01                                                                                            27.6    8e-04 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*02	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TTTTC	TTACGATATTTTGTCTG	CCAACACA	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTTTTCTTACGATATTTTGTCTGCCAACACAATGGACGTC	AFSYDILSANTMDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	268	18	0	93.7


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  L  T  G  Y
                    Query_9638  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTAAGGCTTCTGGATACAGCCTCACCGGCTA  90
V  93.7% (268/286)  IGHV1-2*02  6    ..................G.........................................C................C.T..........  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       S  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  V  N  S  G  A  T  N  C  A  Q
                    Query_9638  91   CTCTGTGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATTAATGTTAACAGTGGCGCCACAAATTGTGCACA  180
V  93.7% (268/286)  IGHV1-2*02  96   ..A.A....................................................C..CCC.........T.G......C.A......  185
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  Q  G  G  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  T  S  D  D  T  A
                    Query_9638  181  GAAGTTTCAGGGCGGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCGTACATGGAGCTGAGCAGGCTGACATCTGACGACACGGC  270
V  93.7% (268/286)  IGHV1-2*02  186  .............A.....................................C......................G...............  275
                                       K  F  Q  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                     ------------><----------------CDR3-IMGT--------------->                                 
                                       V  Y  Y  C  A  F  S  Y  D  I  L  S  A  N  T  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9638  271  CGTCTATTACTGTGCGTTTTCTTACGATATTTTGTCTGCCAACACAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  358
V  93.7% (268/286)  IGHV1-2*02  276  ...G............------------------------------------------------------------------------  291
                                       V  Y  Y  C  A                                                                         
D  94.1% (16/17)    IGHD3-9*01  4    ---------------------.............A...--------------------------------------------------  20
J  100.0% (42/42)   IGHJ6*02    21   ----------------------------------------------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_112059

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           263     2e-72
IGHD2-8*02                                                                                            16.1    2.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGATGCGGCGGAGTGAATTCGGC	ACTGGTGG	GG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATGCGGCGGAGTGAATTCGGCACTGGTGGGGACTTCTTTGACCAC	ARMRRSEFGTGGDFFDH	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	20	10	0	66.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	94	20	0	82.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	207	39	0	84.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  R  S  V  S  F  L  W  S  W  V  R  Q  D  P  G  K  G 
                    Query_9639   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTGAGGAGTGTGTCTTTCCTCTGGAGCTGGGTCCGCCAGGACCCAGGGAAGGGC  90
V  84.1% (207/246)  IGHV4-31*03  49   ....................................A.C..C....GTGG..A.TA..........A........C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  R  Y  Y  S  G  S  S  R  Y  N  P  S  L  G  S  R  V  S  M  S  L  D  T  S 
                    Query_9639   91   CTGGAGTGGATTGGTTACAGGTATTACAGTGGAAGTAGTCGGTATAATCCGTCCCTCGGGAGTCGAGTTTCCATGTCACTAGACACGTCT  180
V  84.1% (207/246)  IGHV4-31*03  139  ..............G....TC...........G..C.CCTAC..C..C.........AA..........A....A...G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       R  N  Q  F  S  L  K  L  T  S  V  T  T  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  F  G 
                    Query_9639   181  AGGAACCAATTTTCCCTGAAGTTGACCTCAGTGACGACCGCGGACACGGCCATCTATTACTGTGCGCGGATGCGGCGGAGTGAATTCGGC  270
V  84.1% (207/246)  IGHV4-31*03  229  .A......G..C.........C...G...T.....TG..............G.G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      MGT-------------------->                                  
                                       T  G  G  D  F  F  D  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9639   271  ACTGGTGGGGACTTCTTTGACCACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  328
D  100.0% (8/8)     IGHD2-8*02   11   ........--------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*02     1    ----------...A.......T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_247257

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           343     2e-96
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9640   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (232/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_9640   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  D  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_9640   181  CAGTTCTCCGTGGACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  94.7% (232/245)  IGHV4-59*01  229  .........C..A.G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  93.1% (54/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  A  T  V  I  V  S  S 
                    Query_9640   271  GTCTGGGGCCAAGGGGCCACGGTCATCGTCTCCTCA  306
J  93.1% (54/58)    IGHJ6*02     27   ...............A.........C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_247256

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         329     3e-92
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGG	AGTAGTGGTTATTAC	ATCATCAACTTCTA	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGGAGTAGTGGTTATTACATCATCAACTTCTACGACCCC	ARDGSSGYYIINFYDP	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  S  A  S  G  F  R  F  S  D  Y  A  M  H  W  V  R  L  A  P  G  K  G  L  
                    Query_9641     1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCCGCTTCAGTGACTATGCTATGCACTGGGTCCGCCTGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-30-3*01  47   ....................G..............AC.......AG.......................A.........C..........  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  T  T  I  S  Y  D  G  S  S  K  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9641     91   AGTGGGTGACAACAATATCATATGATGGAAGCAGTAAAAATTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-30-3*01  137  ........G..GTT...................A....T.C...........C.....................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                        K  D  T  V  H  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  D  G  S  S  G  Y  Y  
                    Query_9641     181  AGGACACGGTGCATCTGCAAATGAACAGCCTGAGACCTGAAGACACGGCTGTGTATTACTGTGCGAGAGACGGGAGTAGTGGTTATTACA  270
V  92.0% (230/250)  IGHV3-30-3*01  227  ..A.....C..T.......................G....G.............................--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01    14   --------------------------------------------------------------------------...............-  28

                                        T------------------>                                  
                                        I  I  N  F  Y  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9641     271  TCATCAACTTCTACGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (41/41)   IGHJ5*02       11   -------------.........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_247251

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           329     3e-92
IGHD3-22*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	237	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	20	23	4	4	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	24	0	0	100
FR3-IMGT	123	236	114	110	4	0	96.5
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	224	217	7	0	96.9


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_9642   20   GTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  109
V  96.9% (217/224)  IGHV3-33*01  72   ...................AG..A..................................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  Q  M  N
                    Query_9642   110  TGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCAAGAACACGTTGTATCTGCAAATGAA  199
V  96.9% (217/224)  IGHV3-33*01  162  .............................................................T...........C................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------------------CDR3-IMGT---------------------
                                        S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  T  T  G  R  D  P  F  D  I
                    Query_9642   200  CAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATAT  289
V  96.9% (217/224)  IGHV3-33*01  252  .......A...................G................----------------------------------------------  295
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  88.9% (16/18)    IGHD3-22*01  5    -------------------------------------------------------..........G..G....-----------------  22
J  94.0% (47/50)    IGHJ3*02     1    ---------------------------------------------------------------------------....G..........  15

                                      >                                  
                                        W  G  Q  G  T  I  L  T  V  S  S  
                    Query_9642   290  CTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  324
J  94.0% (47/50)    IGHJ3*02     16   ..................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_247250

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD3-10*01                                                                                           14.1    8.5  
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	N/A	TTCGGGG	CTGCCTCATGAGG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAGATTCGGGGCTGCCTCATGAGGACTTCCAGCAC	AQDSGLPHEDFQH	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  Y  S  M  S  W  V  R  Q  A  P  G  K  R  L  
                    Query_9643   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCTACTATTCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGCGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   ............................................AG....G................................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  M  S  G  T  G  G  N  T  Y  Y  A  D  S  V  K  D  R  F  T  I  Y  R  D  N  S  
                    Query_9643   91   AGTGGGTCTCAGGTATGAGTGGTACTGGTGGTAACACATACTACGCAGACTCCGTGAAGGACCGGTTCACCATCTACAGAGACAACTCCA  180
V  92.8% (232/250)  IGHV3-23*01  137  ............C...T.......G........G..........................G..............C.........T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  S  T  V  Y  L  Q  M  N  S  L  R  V  D  D  T  A  I  Y  Y  C  A  Q  D  S  G  L  P  H  E  
                    Query_9643   181  AGAGCACGGTATATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCCATATATTACTGTGCGCAAGATTCGGGGCTGCCTCATGAGG  270
V  92.8% (232/250)  IGHV3-23*01  227  ...A....C.G.........................C...G.........G..............A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-10*01  13   ----------------------------------------------------------------------.......-------------  19

                                      ---------->                                
                                      D  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9643   271  ACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTC  313
J  100.0% (43/43)   IGHJ1*01     8    ...........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_247252

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           343     2e-96
IGHD3-9*01                                                                                            44.9    5e-09
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	TCTCCGAAGCC	TATTACGATATTATGACTGATTATTATAA	GGGGGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CTCAGAGTCTCCGAAGCCTATTACGATATTATGACTGATTATTATAAGGGGGCTTTTGACTTC	LRVSEAYYDIMTDYYKGAFDF	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	4	3	0	57.1
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_9644   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTACTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-74*01  47   ........................................C....G..........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  S  R  I  S  S  D  G  S  K  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9644   91   CTTGGGTCTCACGTATCAGTAGTGATGGGAGTAAGACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (234/249)  IGHV3-74*01  137  TG..............T.A..............GC....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  L  R  V  S  E  A  Y  Y  D  
                    Query_9644   181  AGAACACGCTCTATCTGCAAATGAACAGTCTGAGAGACGAGGACACGGCTGTGTATTACTGTCTCAGAGTCTCCGAAGCCTATTACGATA  270
V  94.0% (234/249)  IGHV3-74*01  227  ..........G.........................C.........................GCA....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.1% (27/29)    IGHD3-9*01   2    --------------------------------------------------------------------------------..........  11

                                      DR3-IMGT-------------------------->                                  
                                      I  M  T  D  Y  Y  K  G  A  F  D  F  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_9644   271  TTATGACTGATTATTATAAGGGGGCTTTTGACTTCTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  339
D  93.1% (27/29)    IGHD3-9*01   12   ..T......G.........--------------------------------------------------  30
J  95.3% (41/43)    IGHJ4*02     6    --------------------------.......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_112050

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_9645   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_9645   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_9645   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_9645   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_112051

Length=407
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     7e-119
IGHD2-21*01                                                                                           18.0    0.69  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CG	ATTGCGGTGGTG	TAGTGATGGAACTTGTTACTCTGGTTCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTAT	ARRLRWCSDGTCYSGSFEY	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	108	6	0	94.7
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	280	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  T  A  S  G  Y  S  F  T  
                    Query_9646   5    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTACGGCTTCTGGATACAGCTTTACCA  94
V  95.6% (280/293)  IGHV5-51*03  2    ..................................................................A..G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  H  R  I  G  W  V  R  Q  M  P  G  K  G  L  E  C  M  A  I  I  F  P  G  D  S  D  T  R  Y  
                    Query_9646   95   GCCACCGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGCATGGCGATCATCTTTCCTGGTGACTCTGATACCAGATATA  184
V  95.6% (280/293)  IGHV5-51*03  92   ..T..T...........................................G....G........A........................C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  M  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_9646   185  GTCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATGAACACCGCCTACCTGCAATGGAGCAGCCTGAAGGCCTCGGACA  274
V  95.6% (280/293)  IGHV5-51*03  182  .C...............................C............C.G...............G.........................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  M  Y  Y  C  A  R  R  L  R  W  C  S  D  G  T  C  Y  S  G  S  F  E  Y  W  G  Q  G  T  
                    Query_9646   275  CCGCCATGTATTACTGTGCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTATTGGGGCCAGGGAACCC  364
V  95.6% (280/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  91.7% (11/12)    IGHD2-21*01  6    -------------------------....T.......-----------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------------------------.....C..C................  30

                                                        
                                      L  V  T  V  S  S  
                    Query_9646   365  TGGTCACCGTCTCCTCAG  382
J  95.3% (41/43)    IGHJ4*02     31   ..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39867768


Query= Query_112052

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           330     1e-92
IGHD3-9*01                                                                                            14.1    7.9  
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTTTGAC	CACGGCTTAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTGACCACGGCTTATACTACTTTGACTAC	ARDFDHGLYYFDY	230	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	23	1	0	95.8
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	109	5	0	95.6
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	218	7	0	96.9


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  S  N  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_9647   13   GTCTGGATTCACCTTCAGTAGCAATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  96.9% (218/225)  IGHV3-33*01  72   ......................T...................................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  D  K  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  G  N  S  K  N  A  L  F  L  Q  M  N
                    Query_9647   103  TGGAAGTGATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGGCAATTCCAAGAACGCGCTGTTTCTGCAAATGAA  192
V  96.9% (218/225)  IGHV3-33*01  162  .......A......................................A.........A.............A......A............  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------CDR3-IMGT-------------->              
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  D  H  G  L  Y  Y  F  D  Y  W  G  Q  G  T
                    Query_9647   193  CAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGATTTTGACCACGGCTTATACTACTTTGACTACTGGGGCCAGGGAAC  282
V  96.9% (218/225)  IGHV3-33*01  252  ...........................G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (7/7)     IGHD3-9*01   12   ---------------------------------------------.......--------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------------------------............................  28

                                                          
                                        L  V  T  V  S  S  
                    Query_9647   283  CCTGGTCACCGTCTCCTCAG  302
J  100.0% (48/48)   IGHJ4*02     29   ....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_112054

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9648   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9648   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_9648   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9648   271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_112055

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD3-3*01                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTCCTG	TACGATTTTTGGAATGGT	CAGCAGTACTTTTTCAAGGGTTTA	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCTGTACGATTTTTGGAATGGTCAGCAGTACTTTTTCAAGGGTTTAGACGTC	ARVLYDFWNGQQYFFKGLDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  R  F  A  N  S
                    Query_9649   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGGTTTGCCAACTC  90
V  93.1% (269/289)  IGHV5-51*01  6    ..................................................A...........................C...A...G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  R  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  G  P
                    Query_9649   91   CTGGATCGCCTGGGTGCGCCGGATGCCCGGAAAAGGCCTGGAGTGGATGGGCGTCATCTACCCTGGTGACTCTGATACCAGATACGGCCC  180
V  93.1% (269/289)  IGHV5-51*01  96   ........G...........A.........G....................GA.......T........................A....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  G  L  R  A  S  D  T  A
                    Query_9649   181  GTCCTTCCAGGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTATCTTCACTGGAGCGGCCTGAGGGCCTCGGACACCGC  270
V  93.1% (269/289)  IGHV5-51*01  186  .........A..................................G.........C..G..G......A......A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  F  C  A  R  V  L  Y  D  F  W  N  G  Q  Q  Y  F  F  K  G  L  D  V  W  G  Q  G  T  S
                    Query_9649   271  CATGTATTTCTGTGCGAGAGTCCTGTACGATTTTTGGAATGGTCAGCAGTACTTTTTCAAGGGTTTAGACGTCTGGGGCCAAGGGACTTC  360
V  93.1% (269/289)  IGHV5-51*01  276  ........A..........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  94.4% (17/18)    IGHD3-3*01   5    -------------------------.............G....-----------------------------------------------  22
J  94.9% (37/39)    IGHJ6*02     24   -------------------------------------------------------------------....................CA.  46

                                                      
                                        V  T  V  S  S 
                    Query_9649   361  GGTCACCGTCTCCTCA  376
J  94.9% (37/39)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_112056

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           445     2e-127
IGHD2-2*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	CG	GGACATTGTAGTAGTAGCAGCTGC	CAGGCGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGCGGGACATTGTAGTAGTAGCAGCTGCCAGGCGCACTACTACGGTATGGACGTC	AGAGHCSSSSCQAHYYGMDV	290	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	73	2	0	97.3
CDR1-IMGT	77	100	24	24	0	0	100
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	113	1	0	99.1
CDR3-IMGT (germline)	290	296	7	6	1	0	85.7
Total	N/A	N/A	295	290	5	0	98.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_9650   2    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  91
V  98.3% (290/295)  IGHV1-69*06  1    ...G...................G..................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 
                    Query_9650   92   AGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGCACAGCAAACTAC  181
V  98.3% (290/295)  IGHV1-69*06  91   .............................................................................T............  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  G  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_9650   182  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGGCAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGAC  271
V  98.3% (290/295)  IGHV1-69*06  181  .....................................A....................................................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  V  Y  Y  C  A  G  A  G  H  C  S  S  S  S  C  Q  A  H  Y  Y  G  M  D  V  W  G  Q  G 
                    Query_9650   272  ACGGCCGTGTATTACTGTGCGGGAGCGGGACATTGTAGTAGTAGCAGCTGCCAGGCGCACTACTACGGTATGGACGTCTGGGGCCAAGGA  361
V  98.3% (290/295)  IGHV1-69*06  271  .....................A...-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  91.7% (22/24)    IGHD2-2*01   2    ---------------------------...T............C.......---------------------------------------  25
J  98.1% (52/53)    IGHJ6*02     10   ----------------------------------------------------------...............................G  41

                                                           
                                       T  T  V  T  V  S  S 
                    Query_9650   362  ACCACGGTCACCGTCTCCTCA  382
J  98.1% (52/53)    IGHJ6*02     42   .....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_112057

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           318     6e-89
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	AGCT	CGATTTTTGGACTGGTTATT	TTAGGTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAAGCTCGATTTTTGGACTGGTTATTTTAGGTAACTTTGACTAC	REARFLDWLF*VTLTT	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	26	27	26	0	1	96.3
CDR1-IMGT	27	56	30	25	5	0	83.3
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	249	228	20	1	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T   A  L  S  L  E  A  P  S  V  A  V  L  T  T  G  A  G  S  A  S  P  Q  G  R  G
                    Query_9651   1    ACCCTGTCCCTCAC-TGCACTGTCTCTGGAGGCTCCATCAGTAGCAGTGCTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGG  89
V  91.6% (228/249)  IGHV4-39*01  49   ..............C..............T...........C..T...AG.........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                        W  S  G  L  G  V  S  I  I  V  G  T  P  T  I  I  R  P  S  G  V  D  S  T  C  P  *  T  L  L
                    Query_9651   90   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAACACCTACTATAATCCGTCCCTCAGGAGTCGACTCCACATGTCCGTAGACACTTCT  179
V  91.6% (228/249)  IGHV4-39*01  139  ..................................G.........C..C..........A.......G..AC...A...........G..C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                        R  T  S  S  P  *  G  *  P  L  *  P  P  Q  T  R  L  F  I  T  V  R  E  A  R  F  L  D  W  L
                    Query_9651   180  AAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCAGACACGGCTGTTTATTACTGTGCGGGAAGCTCGATTTTTGGACTGGTT  269
V  91.6% (228/249)  IGHV4-39*01  229  ...................A.....G...........................G............A..---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-3*01   7    -------------------------------------------------------------------------...........G.....  23

                                      GT------------------>                                  
                                        F  *  V  T  L  T  T  G  A  R  E  P  W  S  L  S  P  Q 
                    Query_9651   270  ATTTTAGGTAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  324
D  95.0% (19/20)    IGHD3-3*01   24   ...----------------------------------------------------  26
J  97.8% (44/45)    IGHJ4*02     4    ----------..................................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_138920

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           285     5e-79
IGHD3-22*01                                                                                           16.1    2.6  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGCGGCCCGGAACCGAC	AGTAGTGG	CCTCCC	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCGGCCCGGAACCGACAGTAGTGGCCTCCCCAATTGGTTCGACCCC	ARGRPGTDSSGLPNWFDP	287	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	59	11	0	84.3
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	172	27	19	5	3	70.4
FR3-IMGT	173	286	114	92	22	0	80.7
CDR3-IMGT (germline)	287	292	6	6	0	0	100
Total	N/A	N/A	292	239	50	3	81.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  A  V  R  R  P  G  D  S  L  K  I  S  C  K  T  S  G  Y  K  F  S  T  Y
                    Query_9652   1    GCAGCTGGTGCAGTCTGGAGCAGCGGTGAGGAGGCCCGGAGACTCTCTGAAGATCTCTTGTAAGACCTCGGGATACAAGTTCTCCACATA  90
V  81.8% (239/292)  IGHV5-51*01  6    .......................A.....AA.A......G..G..............C......GGT..T.......GC..TA...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><--------CDR2-IMGT--------><-------
                                        G  I  A  W  V  R  Q  M  P  G  R  G  L  E  W  A  G  I  I  Y  P  S  D  S  K  N  V  R  Y  N
                    Query_9652   91   CGGGATCGCCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGGCGGGAATCATCTATCCTAGTGACTCAAAGAATGTCAGATATAA  180
V  81.8% (239/292)  IGHV5-51*01  96   .T......G.......................A.............AT...G............G.......---TG..AC......C.G  182
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S     D  T  R  Y  S

                                      ---------------------------------------------FR3-IMGT-------------------------------------
                                        P  S  F  R  G  H  V  T  I  S  G  E  K  A  I  T  T  A  Y  L  E  W  D  S  R  G  A  S  G  S
                    Query_9652   181  TCCGTCCTTCAGAGGCCACGTCACCATTTCCGGCGAGAAGGCCATCACCACCGCCTACCTGGAGTGGGACAGCCGGGGGGCCTCGGGCAG  270
V  81.8% (239/292)  IGHV5-51*01  183  C.........CA......G........C..A.C...C...T......G.............C.....AG.....T.AA........A..C  272
                                        P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T

                                      ---------------><----------------------CDR3-IMGT--------------------->                    
                                        G  I  Y  Y  C  A  R  G  R  P  G  T  D  S  S  G  L  P  N  W  F  D  P  W  G  Q  G  T  L  V
                    Query_9652   271  CGGCATCTATTACTGTGCGAGAGGGCGGCCCGGAACCGACAGTAGTGGCCTCCCCAATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  360
V  81.8% (239/292)  IGHV5-51*01  273  ..C...G...............--------------------------------------------------------------------  294
                                        A  M  Y  Y  C  A  R                                                                     
D  100.0% (8/8)     IGHD3-22*01  14   ----------------------------------------........------------------------------------------  21
J  94.0% (47/50)    IGHJ5*02     2    ------------------------------------------------------...C................................  37

                                                    
                                        T  V  A  P  
                    Query_9652   361  CACCGTCGCCCCAG  374
J  94.0% (47/50)    IGHJ5*02     38   .......T..T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_187499

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           280     1e-77
IGHD3-10*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTTTCAGG	TACTATGGTTCGG	CGGATTCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTTCAGGTACTATGGTTCGGCGGATTCT	ARAFRYYGSADS	237	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	122	21	16	2	3	76.2
FR3-IMGT	123	236	114	102	12	0	89.5
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	243	213	27	3	87.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  D  S  I  S  D  S  Y  F  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_9653   4    CCCTGAGACTCTCCTGCAGTGTCTCTGGTGACTCCATCAGTGATTCGTACTTCAGCTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAGT  93
V  87.7% (213/243)  IGHV4-59*01  50   .....TCC...A......C...........G..........AG..AC....GG.......................G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y     S  G  S  S  S  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  I  S  K  N  
                    Query_9653   94   GGATTGGGTATATCTAT---AGCGGGAGCTCCAGCTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCTGACATATCCAAGAACC  180
V  87.7% (213/243)  IGHV4-59*01  140  .................TAC..T......A...A......................................TA....CG..........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  T  Y  Y  C  A  R  A  F  R  Y  Y  G  S  A  D  
                    Query_9653   181  ACTTCTCCCTGAGGTTGACCTCTGTGACCGCTGCGGACACGGCCACATATTACTGTGCGAGAGCTTTCAGGTACTATGGTTCGGCGGATT  270
V  87.7% (213/243)  IGHV4-59*01  230  .G..........A.C...G.........................GTG................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (13/13)   IGHD3-10*01  5    -----------------------------------------------------------------------.............------  17

                                      ->                                  
                                      S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9653   271  CTTGGGGCCAGGGAGCCCTCGTCACCGTCTCCTCAG  306
J  94.1% (32/34)    IGHJ4*02     15   --............A....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_50051

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            357     1e-100
IGHD4-17*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	N/A	CTACGGTGACTAC	AGT	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACTACGGTGACTACAGTTACGACTATTACGGTATGGACGTC	ARDYGDYSYDYYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  N  N  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9654   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAATAACTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-7*01   47   ....................................C.....G..G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  T  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_9654   91   AGTGGGTGGCCACCATAAAGCAAGATGGAAGTGAGAAGTACTATGTGGACTCTGTGGAGGGCCGCTTCACCATCTCCAGGGACAACGCCA  180
V  95.6% (239/250)  IGHV3-7*01   137  ............A........................A..................A.......A..............A..........  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  G  D  Y  S  Y  
                    Query_9654   181  AGAACTCACTGTATCTCCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGGACTACGGTGACTACAGTTACG  270
V  95.6% (239/250)  IGHV3-7*01   227  ................G..................................................A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD4-17*01  4    ----------------------------------------------------------------------.............-------  16
J  96.5% (55/57)    IGHJ6*02     6    --------------------------------------------------------------------------------------...T  9

                                      T------------------>                                 
                                      D  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9654   271  ACTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.5% (55/57)    IGHJ6*02     10   ....C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_253450

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           336     1e-94
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	N/A	AGCGAGGGCCTGCCTGGCACAC	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCGAGGGCCTGCCTGGCACACTGCTTTTGATATC	AKRGPAWHTAFDI	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	228	13	0	94.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9655   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTCGTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.6% (228/241)  IGHV4-59*08  49   ...........................................G..AC.......G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  R  Y  I  F  N  S  G  N  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9655   91   TGGATTAGGTATATCTTTAACAGTGGGAACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  94.6% (228/241)  IGHV4-59*08  139  ......G.........A.T.........G.......................A.....................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  R  G  P  A  W  H  T  A  F 
                    Query_9655   181  CAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTATATTATTGTGCGAAGCGAGGGCCTGCCTGGCACACTGCTTTT  270
V  94.6% (228/241)  IGHV4-59*08  229  ..............G....G...........................G.....C.......-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
J  100.0% (47/47)   IGHJ3*02     4    -----------------------------------------------------------------------------------.......  10

                                      ----->                                  
                                       D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9655   271  GATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  310
J  100.0% (47/47)   IGHJ3*02     11   ........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_309711

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           330     1e-92
IGHD2-15*01                                                                                           31.5    5e-05
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGAGTTC	TTGTACTGGTGGTAGGTGCTAC	ATGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGAGTTCTTGTACTGGTGGTAGGTGCTACATGTTCTACTACTACGCTGTGGACGTC	AGSSCTGGRCYMFYYYAVDV	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	248	3	3	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  N  V  S  G  V  S  I  S  T  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_9656   4    CCCTGAGACTCTCCTGTAATGTCTCTGGTGTCTCCATCAGTACTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  93.1% (228/245)  IGHV4-39*01  50   .....TCC...A....C.C...........G.........C.G..G..........................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  M  G  S  I  Y  H  S  G  S  A  F  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  T  S  
                    Query_9656   94   TGGAGTGGATGGGGAGTATCTATCATAGTGGGAGCGCCTTCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCCGTAGACACGTCCA  183
V  93.1% (228/245)  IGHV4-39*01  140  ..........T............T...........A...A................A................A................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  C  T  G  G  R  
                    Query_9656   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGGGGAGTTCTTGTACTGGTGGTAGGT  273
V  93.1% (228/245)  IGHV4-39*01  230  .................................................................-------------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  90.9% (20/22)    IGHD2-15*01  7    -------------------------------------------------------------------------.....G.........C.  23

                                      R3-IMGT------------------------>                                 
                                      C  Y  M  F  Y  Y  Y  A  V  D  V  W  G  Q  G  T  T  I  T  V  S  S 
                    Query_9656   274  GCTACATGTTCTACTACTACGCTGTGGACGTCTGGGGCCAAGGGACCACGATCACCGTCTCCTCA  338
D  90.9% (20/22)    IGHD2-15*01  24   .....------------------------------------------------------------  28
J  94.5% (52/55)    IGHJ6*02     8    ----------...........G.A..........................G..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_309710

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           291     5e-81
IGHD3-22*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAC	ATAGTACTGG	CCGAATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATAGTACTGGCCGAATCATTGACTAT	ARAHSTGRIIDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G 
                    Query_9657   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  87.2% (218/250)  IGHV4-31*01  49   ...................C................A...G.A....TGG..A...C....G.............CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  Y  I  Y  H  V  E  S  T  S  R  N  P  S  L  K  S  Q  L  T  I  S  L  D  P  S 
                    Query_9657   91   CTGGAGTGGATGGGATACATCTATCACGTTGAGAGCACCTCCCGCAACCCGTCCCTCAAGAGTCAACTTACCATTTCACTCGACCCGTCT  180
V  87.2% (218/250)  IGHV4-31*01  139  ...........T..G.........T..AG..G........A.TA....................T.G.......A...G.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  S  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  S  T  G  R  I 
                    Query_9657   181  AAGAGCCAGTTCTCCCTAAAACTGACCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCACATAGTACTGGCCGAATC  270
V  87.2% (218/250)  IGHV4-31*01  229  ....A............G..G....G....G.......................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-22*01  12   -------------------------------------------------------------------------......G...-------  21

                                      -------->                                  
                                       I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9657   271  ATTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.6% (41/42)    IGHJ4*02     7    -.......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_326586

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	11	1	0	91.7
CDR1-IMGT	25	48	24	18	6	0	75
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	123	24	17	7	0	70.8
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	233	213	20	0	91.4


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  *  V  S  S  I 
                    Query_9658   13   TGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTAGGTCTCATCCATT  102
V  91.4% (213/233)  IGHV3-21*01  64   ...........TG.....AC........G.T....C........................................G.............  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_9658   103  AGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAATTCACTGTATCTG  192
V  91.4% (213/233)  IGHV3-21*01  154  ...A.T...A.TAG.....T..A......................................................C............  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------------------CDR3-IMGT----------
                                       Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  W  V  A  G  T  G 
                    Query_9658   193  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGA  282
V  91.4% (213/233)  IGHV3-21*01  244  .................................G.G.....C...........-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (11/11)   IGHD6-19*01  11   ---------------------------------------------------------------------------...........----  21

                                      -------------->                                  
                                       H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9658   283  CACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  331
J  97.7% (42/43)    IGHJ4*02     6    ------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_138925

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            411     4e-117
IGHD6-19*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	CG	GGGTATAGCAGTGGCTGGTAC	GCGTTTCGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGACCGGGGTATAGCAGTGGCTGGTACGCGTTTCGGTTTGACTAC	AHRPGYSSGWYAFRFDY	267	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	50	45	42	3	0	93.3
CDR1-IMGT	51	80	30	30	0	0	100
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	152	21	21	0	0	100
FR3-IMGT	153	266	114	113	1	0	99.1
CDR3-IMGT (germline)	267	276	10	10	0	0	100
Total	N/A	N/A	271	267	4	0	98.5


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  S  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R 
                    Query_9659   6    CTGGTGAAGCCCTCGCAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGT  95
V  98.5% (267/271)  IGHV2-5*01   31   ........A...A.A...........................................................................  120
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R 

                                      ------FR2-IMGT---------------------><-----CDR2-IMGT-----><--------------------------------
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T 
                    Query_9659   96   CAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACC  185
V  98.5% (267/271)  IGHV2-5*01   121  ..........................................................................................  210
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T 

                                      --------------------FR3-IMGT----------------------------------------------------><--------
                                       V  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  R 
                    Query_9659   186  GTCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAGA  275
V  98.5% (267/271)  IGHV2-5*01   211  A.........................................................................................  300
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  R 

                                      ------------CDR3-IMGT-------------------->                                  
                                       P  G  Y  S  S  G  W  Y  A  F  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9659   276  CCGGGGTATAGCAGTGGCTGGTACGCGTTTCGGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  351
V  98.5% (267/271)  IGHV2-5*01   301  .---------------------------------------------------------------------------  301
                                                                                                                  
D  100.0% (21/21)   IGHD6-19*01  1    ---.....................----------------------------------------------------  21
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_275640

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           330     1e-92
IGHD6-13*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  A  L  E 
                    Query_9660   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGCACTGGAG  90
V  93.1% (228/245)  IGHV4-59*08  49   ...........................................G......................................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  F  Y  T  G  T  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9660   91   TGGATCGGGTCTATCTTTTACACTGGGACCACCAACTACGACCCCTCTCTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGAAC  180
V  93.1% (228/245)  IGHV4-59*08  139  .....T....A.....A.....G.....G..........A.......C....................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  V  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  H  R  A  A  A  G  P 
                    Query_9660   181  CAGTTCTCCCTGAGAGTGACCTCTCTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATCCCCATAGAGCAGCAGCTGGCCCC  270
V  93.1% (228/245)  IGHV4-59*08  229  .............AGC...G....G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD6-13*01  7    --------------------------------------------------------------------------............----  18
J  93.2% (41/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_9660   271  TTTGACAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  313
J  93.2% (41/44)    IGHJ4*02     6    ......T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_27118

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           347     7e-98
IGHD4-17*01                                                                                           12.2    33   
IGHJ6*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCTCGCGAAGGG	GACTAC	CCTAGG	TACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGCTCGCGAAGGGGACTACCCTAGGTACCACTACCACGGTATGGACGTC	ARDAREGDYPRYHYHGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9661   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTCGCTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-21*01  47   ............................................A......G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  T  F  I  Y  Y  S  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9661   91   AGTGGGTCTCATCCATTAGTAGCACTAGCACTTTCATATACTACTCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  94.4% (236/250)  IGHV3-21*01  137  ......................T.G...T.G..A..........G........G...................................A  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      E  N  S  L  H  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  R  D  A  R  E  G  D  Y  
                    Query_9661   181  AGAACTCTCTGCATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTTCTGTGCGAGAGATGCTCGCGAAGGGGACTACC  270
V  94.4% (236/250)  IGHV3-21*01  227  .......A...T........................C....................A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD4-17*01  2    -----------------------------------------------------------------------------------......-  7

                                      -IMGT----------------------->                                 
                                      P  R  Y  H  Y  H  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9661   271  CTAGGTACCACTACCACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  96.5% (55/57)    IGHJ6*02     6    -----...T.....T...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_138926

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           316     2e-88
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTGGTTTG	CGGAGAGCTATTAT	TC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTGGTTTGCGGAGAGCTATTATTCTGACTAC	ARDWFAESYYSDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  P  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9662   1    GGTCCCTGAGACTCTCCTGTGTTGCCTCTGGATTTCCCTTCAGTGACTACAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-21*01  47   .....................CA...........CA........AG...T........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  G  T  S  S  F  K  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9662   91   AGTGGGTCTCATATATTAGTGGCACTAGTAGTTTCAAATCTTACGCAGACTCTGTTAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.4% (226/250)  IGHV3-21*01  137  ............CC......A.T.G........A..T..AC...........A..G..................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  Y  T  V  Y  L  Q  M  N  S  L  R  A  A  D  T  A  V  Y  Y  C  A  R  D  W  F  A  E  S  Y  
                    Query_9662   181  AGTACACGGTGTATCTGCAGATGAACAGCCTGAGAGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGATTGGTTTGCGGAGAGCTATT  270
V  90.4% (226/250)  IGHV3-21*01  227  ..A..T.AC..........A...................A..............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  85.7% (12/14)    IGHD3-10*01  15   ------------------------------------------------------------------------------...G...T....  26

                                      ---------->                                  
                                      Y  S  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_9662   271  ATTCTGACTACTGGGGCCAGGGAATCTTGGTCACTGTCTCCTCAG  315
D  85.7% (12/14)    IGHD3-10*01  27   ..-------------------------------------------  28
J  92.7% (38/41)    IGHJ4*02     8    ----....................C.C.......C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_187493

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            386     2e-109
IGHD2-15*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCACCCCAGTATCGT	GTGGTGGCTGCTAC	GGGAC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCACCCCAGTATCGTGTGGTGGCTGCTACGGGACACTACTATTACGGTATGGACGCC	AAPQYRVVAATGHYYYGMDA	290	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	72	3	0	96
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	101	13	0	88.6
CDR3-IMGT (germline)	290	292	3	3	0	0	100
Total	N/A	N/A	291	269	22	0	92.4


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_9663   2    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGCTACACCTTCACT  91
V  92.4% (269/291)  IGHV1-8*01   1    ...G...................G...............................A.....................A...........C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  S  S  G  N  T  G  F 
                    Query_9663   92   AGTTATGACATCAACTGGGTGCGGCAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCAAGCAGTGGTAACACAGGCTTT  181
V  92.4% (269/291)  IGHV1-8*01   91   ........T..............A............................................T.A.................A.  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  S  L  T  R  D  I  S  T  S  T  G  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_9663   182  GCACAGAAGTTCCAGGGCAGAGTCAGTTTGACCAGGGATATTTCCACAAGCACAGGCTACATGGAACTGAGTAGCCTGAGATCTGAGGAC  271
V  92.4% (269/291)  IGHV1-8*01   181  .........................CCA........A.C.CC....T........C.........G.....C..................  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  V  Y  F  C  A  A  P  Q  Y  R  V  V  A  A  T  G  H  Y  Y  Y  G  M  D  A  W  G  Q  G 
                    Query_9663   272  ACGGCCGTGTATTTCTGTGCGGCACCCCAGTATCGTGTGGTGGCTGCTACGGGACACTACTATTACGGTATGGACGCCTGGGGCCAAGGG  361
V  92.4% (269/291)  IGHV1-8*01   271  .............A.......---------------------------------------------------------------------  291
                                       T  A  V  Y  Y  C  A                                                                      
D  92.9% (13/14)    IGHD2-15*01  15   ------------------------------------.....A........----------------------------------------  28
J  96.4% (54/56)    IGHJ6*02     7    -------------------------------------------------------.......C.............T.............  41

                                                           
                                       T  T  V  T  V  S  S 
                    Query_9663   362  ACCACGGTCACCGTCTCCTCA  382
J  96.4% (54/56)    IGHJ6*02     42   .....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_27111

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD6-19*01                                                                                           12.2    30   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTGGC	GGCTGG	CTTAC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTGGCGGCTGGCTTACGGACGTC	TRGGGWLTDV	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9664   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTGGTTTCTACTGGAGCTGGATTCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   .............................T............A...A...............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  H  Y  S  G  H  T  N  Y  N  P  S  L  R  S  R  V  I  I  S  L  D  T  S  N  N 
                    Query_9664   91   TGGATTGGGAATATCCACTACAGTGGGCACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCATCATATCGCTGGACACGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  .........T.....T.T.........AG.......................A...........C......AG.A...........G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  I  S  L  K  V  N  S  G  T  A  A  D  T  A  L  Y  Y  C  T  R  G  G  G  W  L  T  D  V  W 
                    Query_9664   181  CAGATCTCCCTGAAGGTGAACTCTGGGACCGCTGCGGACACGGCCCTCTATTATTGTACGAGAGGTGGCGGCTGGCTTACGGACGTCTGG  270
V  90.6% (221/244)  IGHV4-59*01  229  ...T...........C...G.....T...................G.G.....C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  13   ---------------------------------------------------------------------......---------------  18
J  100.0% (40/40)   IGHJ6*02     23   --------------------------------------------------------------------------------..........  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_9664   271  GGCCAAGGGACCACGGTCACCGTCTCCTCA  300
J  100.0% (40/40)   IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_27110

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            349     3e-98
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ4*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-19*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGGG	AGCAGTGGC	CGCTTCATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGGAGCAGTGGCCGCTTCATCATTGACTAC	ARGGSSGRFIIDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	93	21	0	81.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	257	34	0	88.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  T  F  S  N  Y
                    Query_9665   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTCAGGCTTCTGGATACACCTTCAGCAATTA  90
V  88.3% (257/291)  IGHV1-8*01   6    ..................G.........................................CA.....................C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        E  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  I  N  P  K  G  G  H  T  G  Y  A  Q
                    Query_9665   91   TGAAATCAATTGGGTGCGACAAGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATAAACCCTAAAGGTGGTCACACTGGCTATGCACA  180
V  88.3% (257/291)  IGHV1-8*01   96   ...T.....C...........G...................................G........CA.....A....A...........  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  S  T  I  G  S  N  G  T  A  Y  M  E  L  N  R  L  R  S  E  G  T  A
                    Query_9665   181  GAAATTCCAGGGCAGAGTCACCATGAGCACTATTGGTTCAAACGGCACAGCCTACATGGAACTCAACAGGTTGCGATCTGAGGGCACGGC  270
V  88.3% (257/291)  IGHV1-8*01   186  ...G......................C..GG.ACACC..C.TAA................G..G.G...CC..A.........A......  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                 
                                        V  Y  Y  C  A  R  G  G  S  S  G  R  F  I  I  D  Y  W  G  H  G  S  L  V  T  V  S  S 
                    Query_9665   271  CGTCTATTACTGTGCGAGAGGCGGGAGCAGTGGCCGCTTCATCATTGACTACTGGGGCCACGGAAGCCTGGTCACCGTCTCCTCA  355
V  88.3% (257/291)  IGHV1-8*01   276  ...G.................----------------------------------------------------------------  296
                                        V  Y  Y  C  A  R  G                                                                
D  100.0% (9/9)     IGHD6-19*01  7    -------------------------.........---------------------------------------------------  15
J  95.1% (39/41)    IGHJ4*01     7    --------------------------------------------................A....C...................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_27117

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           316     2e-88
IGHD6-19*01                                                                                           21.8    0.044
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGGGCAAG	ATAGTAGTGGCTGG	GGCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGAAGGGCAAGATAGTAGTGGCTGGGGCTACTACTTTGACACC	VREGQDSSGWGYYFDT	267	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	80	30	23	7	0	76.7
FR2-IMGT	81	131	51	48	3	0	94.1
CDR2-IMGT	132	152	21	16	5	0	76.2
FR3-IMGT	153	266	114	97	17	0	85.1
CDR3-IMGT (germline)	267	274	8	6	2	0	75
Total	N/A	N/A	274	238	36	0	86.9


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  S  V  S  G  G  S  V  N  S  G  F  Y  Y  W  S  W  
                    Query_9666   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGGTCCGTCAATAGTGGTTTTTATTATTGGAGCTGGA  90
V  86.9% (238/274)  IGHV4-61*01  26   ................T.........................C............C.......GC......AG...C..C..........  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  P  P  G  K  G  L  D  W  I  G  N  V  Y  A  T  G  R  T  K  L  K  S  S  L  T  S  R  
                    Query_9666   91   TCCGGCAGCCCCCAGGGAAGGGACTGGACTGGATTGGCAATGTCTATGCCACTGGGAGAACCAAATTGAAGTCCTCCCTCACGAGTCGAG  180
V  86.9% (238/274)  IGHV4-61*01  116  ............................G........GT..A.....TA..G......C.....C.AC..CC.........A........  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  S  M  S  V  D  K  A  K  N  L  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  V  
                    Query_9666   181  TCAGCATGTCCGTAGACAAGGCCAAGAACCTGTTCTCCCTGAAACTGAACTCTGTGACCGCTGCGGACACGGCCGTTTATTTTTGTGTGC  270
V  86.9% (238/274)  IGHV4-61*01  206  ...C...A..A.......C.T.........A............G....G...........................G....AC....C.A  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------CDR3-IMGT------------------>                                  
                                      R  E  G  Q  D  S  S  G  W  G  Y  Y  F  D  T  W  G  P  G  T  L  V  T  V  S  S  
                    Query_9666   271  GAGAAGGGCAAGATAGTAGTGGCTGGGGCTACTACTTTGACACCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  348
V  86.9% (238/274)  IGHV4-61*01  296  ....--------------------------------------------------------------------------  299
                                      R                                                                             
D  92.9% (13/14)    IGHD6-19*01  5    ------------....C.........----------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*02     1    ------------------------------...........TA........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_27116

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           372     2e-105
IGHD2-21*01                                                                                           10.3    119   
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGGGACCTAC	ATTCC	CGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGGACCTACATTCCCGCCTACTTTGACTAC	ARDQGTYIPAYFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  N  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9667   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.6% (244/250)  IGHV3-21*01  47   ...................................................G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  N  S  N  Y  I  F  Y  A  D  S  V  Q  G  R  F  T  L  S  R  D  N  A  
                    Query_9667   91   AGTGGGTCTCATCCATTAGTAGTAATAGTAATTACATATTCTACGCAGACTCAGTGCAGGGCCGATTCACCCTCTCCAGAGACAACGCCA  180
V  97.6% (244/250)  IGHV3-21*01  137  ........................G.....G........A................A..............A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Q  G  T  Y  I  P  
                    Query_9667   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCAGGGGACCTACATTCCCG  270
V  97.6% (244/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-21*01  24   -----------------------------------------------------------------------------------.....--  28

                                      ------------->                                  
                                      A  Y  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_9667   271  CCTACTTTGACTACTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTCAG  318
J  97.9% (46/47)    IGHJ4*02     2    -..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_27115

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD5-18*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	235	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	24	19	19	0	0	100
CDR1-IMGT	25	48	24	24	0	0	100
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	120	21	21	0	0	100
FR3-IMGT	121	234	114	114	0	0	100
CDR3-IMGT (germline)	235	240	6	5	1	0	83.3
Total	N/A	N/A	235	231	4	0	98.3


Alignments

                                      <----FR1-IMGT-----><-------CDR1-IMGT------><--------------------FR2-IMGT------------------
                                        L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G
                    Query_9668   6    CCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAATGGATTGG  95
V  98.3% (231/235)  IGHV4-59*01  57   ..............................................................................G..G........  146
                                        L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G

                                      ---><-----CDR2-IMGT-----><----------------------------------------------------FR3-IMGT----
                                        N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S
                    Query_9668   96   GAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACCAGTTCTC  185
V  98.3% (231/235)  IGHV4-59*01  147  .T........................................................................................  236
                                        Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S

                                      ------------------------------------------------><----------------CDR3-IMGT---------------
                                        L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y  F  D  Y
                    Query_9668   186  CCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTA  275
V  98.3% (231/235)  IGHV4-59*01  237  ...................................................G...-----------------------------------  291
                                        L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                                    
D  90.0% (18/20)    IGHD5-18*01  1    --------------------------------------------------------..........C.....T...--------------  20
J  100.0% (48/48)   IGHJ4*02     1    -----------------------------------------------------------------------------.............  13

                                      >                                  
                                        W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9668   276  CTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (48/48)   IGHJ4*02     14   ...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_27114

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           403     1e-114
IGHD3-3*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCTCC	TACGAGTTTTGGAGTGGTTCTTAT	GTA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCTCCTACGAGTTTTGGAGTGGTTCTTATGTATACTACGATATGGACGTC	ARASYEFWSGSYVYYDMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  T  F  I  S  Y
                    Query_9669   1    GCAGCTGGTGCAGTCTGGAGCCGAAGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCATCAGTTA  90
V  94.5% (274/290)  IGHV1-69*01  6    ..................G..T..G.................................................G........G...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  V  S  W  V  R  L  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  L  G  A  P  N  Y  A  Q
                    Query_9669   91   TGGTGTCAGCTGGGTGCGACTGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGAATCATCCCTATCTTAGGTGCACCAAACTACGCACA  180
V  94.5% (274/290)  IGHV1-69*01  96   ..C.A...............A.................................G..............T...A..G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_9669   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTCAGATCTGAGGACACGGC  270
V  94.5% (274/290)  IGHV1-69*01  186  ........................................................................G.................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        F  Y  Y  C  A  R  A  S  Y  E  F  W  S  G  S  Y  V  Y  Y  D  M  D  V  W  G  Q  G  T  S  V
                    Query_9669   271  CTTTTATTACTGTGCGAGAGCCTCCTACGAGTTTTGGAGTGGTTCTTATGTATACTACGATATGGACGTCTGGGGCCAAGGGACCTCGGT  360
V  94.5% (274/290)  IGHV1-69*01  276  .G.G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  91.7% (22/24)    IGHD3-3*01   5    -------------------------.....T.............A....-----------------------------------------  28
J  96.1% (49/51)    IGHJ6*02     12   ----------------------------------------------------.......G.........................A....  49

                                                   
                                        T  V  S  S 
                    Query_9669   361  CACCGTCTCCTCA  373
J  96.1% (49/51)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_108879

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD6-19*01                                                                                           14.1    8.5  
IGHJ5*02                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AACGTT	CAGTGGC	CATTAGAGGGCGT	CAACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAACGTTCAGTGGCCATTAGAGGGCGTCAACGGGTTTGACCAC	AKNVQWPLEGVNGFDH	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  A  F  S  A  Y  A  M  S  W  V  R  Q  A  P  G  M  G  L  
                    Query_9670   1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCGCCTTTAGTGCCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGATGGGGCTGG  90
V  94.0% (233/248)  IGHV3-23*01  47   ........................C..........A.......CAG............C......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  Y  G  D  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9670   91   AGTGGGTCTCAGCTATTAGTGGTTATGGTGATAAAACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (233/248)  IGHV3-23*01  137  .......................AG.....G..GC.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  N  V  Q  W  P  L  E  
                    Query_9670   181  AGAGCACGCTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAAACGTTCAGTGGCCATTAGAGG  270
V  94.0% (233/248)  IGHV3-23*01  227  ...A........A......A................................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD6-19*01  9    --------------------------------------------------------------------------.......---------  15

                                      T------------------>                                  
                                      G  V  N  G  F  D  H  W  G  R  G  S  L  V  T  A  S  S  
                    Query_9670   271  GCGTCAACGGGTTTGACCACTGGGGCCGGGGAAGCCTGGTTACCGCCTCCTCAG  324
J  86.0% (43/50)    IGHJ5*02     2    ----....T....C....C........A.....C......C....T........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_108878

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           389     2e-110
IGHD3-16*01                                                                                           14.1    9.5   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACAAGCGGGCGGCACC	TTTGGGG	CGAGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTAC	ARGQAGGTFGASDY	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	46	5	0	90.2
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	104	10	0	91.2
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	295	272	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  S  F  N 
                    Query_9671   4    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAATGAAGGTCTCCTGCAAGGCTTCCGGTTACAGCTTTAAC  93
V  92.2% (272/295)  IGHV1-18*01  1    ...................................................G......................T.......C.....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  G  I  T  W  M  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  A  Y  N  G  N  T  K  Y 
                    Query_9671   94   GACTATGGTATCACTTGGATGCGACAGGCCCCTGGACAGGGGCCTGAGTGGATGGGATGGATCAGCGCATATAATGGTAACACAAAGTAT  183
V  92.2% (272/295)  IGHV1-18*01  91   AG...........GC...G...................A....T........................T..C..............C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  E  R  L  Q  G  R  L  I  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_9671   184  TCAGAGAGGCTCCAGGGCAGACTCATCATGACCACAGACACATCCACGAGCACAGCCTACATGGAATTGAGGAGCCTGAGATCTGACGAC  273
V  92.2% (272/295)  IGHV1-18*01  181  G..C...A.............G...C.......................................GC.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  G  Q  A  G  G  T  F  G  A  S  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_9671   274  ACGGCCGTCTATTATTGTGCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  363
V  92.2% (272/295)  IGHV1-18*01  271  ........G.....C..........-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD3-16*01  15   ------------------------------------------.......-----------------------------------------  21
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------------------....................................  44

                                          
                                       S  
                    Query_9671   364  TCAG  367
J  100.0% (40/40)   IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_79420

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            343     2e-96
IGHD3-3*01                                                                                            14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	GGAGTGG	ACCATAGCGCCACCTGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGAGTGGACCATAGCGCCACCTGGCTTGACTAT	AREGVDHSATWLDY	237	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	24	0	0	100
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	110	4	0	96.5
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	233	226	7	0	97


Alignments

                                     <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                      C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  L  A  K  I 
                    Query_9672  12   TGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGTTGGCCAAAATA  101
V  97.0% (226/233)  IGHV3-7*03  64   ..............................................................................G.......C...  153
                                      C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                     -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                      K  Q  D  G  T  E  K  Y  Y  V  D  S  V  R  G  R  S  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_9672  102  AAGCAAGATGGAACTGAGAAATACTATGTGGACTCTGTGAGGGGCCGATCCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTG  191
V  97.0% (226/233)  IGHV3-7*03  154  .............G..........................A........T........................................  243
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                     --------------------------------------------><----------------CDR3-IMGT--------------->   
                                      Q  M  N  S  L  R  A  E  D  S  A  V  Y  Y  C  A  R  E  G  V  D  H  S  A  T  W  L  D  Y  W 
                    Query_9672  192  CAAATGAACAGCCTGAGAGCCGAGGACTCGGCCGTGTATTATTGTGCGAGAGAAGGAGTGGACCATAGCGCCACCTGGCTTGACTATTGG  281
V  97.0% (226/233)  IGHV3-7*03  244  ...........................A.............C...........-------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (7/7)     IGHD3-3*01  15   ------------------------------------------------------.......-----------------------------  21
J  97.6% (41/42)    IGHJ4*02    7    -------------------------------------------------------------------------------.......C...  17

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_9672  282  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.6% (41/42)    IGHJ4*02    18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_323126

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           374     7e-106
IGHD3-10*01                                                                                           18.0    0.59  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTAT	CAATTAGACT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATCAATTAGACTACTCCTTTGACTAC	ARGLYYYQLDYSFDY	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	244	5	0	98


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_9673   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  98.0% (244/249)  IGHV4-31*02  50   .....TCC...A............................C.................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_9673   94   TGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  98.0% (244/249)  IGHV4-31*02  140  ..........................................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  Q  L  
                    Query_9673   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCTCTATTACTATCAATTAG  273
V  98.0% (244/249)  IGHV4-31*02  230  .....................................................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD3-10*01  2    --------------------------------------------------------------------------.........-------  10

                                      ---------------->                                  
                                      D  Y  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9673   274  ACTACTCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.9% (47/48)    IGHJ4*02     1    ---...A............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_116865

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           383     1e-108
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*01                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGC	TAGTAGTGTTTATTAC	AGAGATGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGCTAGTAGTGTTTATTACAGAGATGGCTTTGACTAC	ARGASSVYYRDGFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	287	266	21	0	92.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  T  S  V  K  V  S  C  K  A  S  G  Y  T  F  D  A  Y 
                    Query_9674   2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGACCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTGATGCCTAT  91
V  92.7% (266/287)  IGHV1-18*01  7    ...................C...................G.........................................ACCAG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  R  Q  G  L  E  W  V  G  W  I  N  T  Y  T  G  D  T  N  Y  A  Q 
                    Query_9674   92   GGTATCAACTGGGTGCGACAGGCCCCTCGACAAGGACTTGAGTGGGTGGGTTGGATCAACACTTACACTGGTGACACAAACTATGCACAG  181
V  92.7% (266/287)  IGHV1-18*01  97   .......G...................G.......G.........A....A.......G.G......A....A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  R  L  R  Y  D  D  T  A 
                    Query_9674   182  AATCTCCAGGGCAGAGTCACCATGACCACTGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGACTGAGATATGACGACACGGCC  271
V  92.7% (266/287)  IGHV1-18*01  187  ..G..........................A......................................C.......C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  G  A  S  S  V  Y  Y  R  D  G  F  D  Y  W  G  H  G  T  L  V  T  V  S  S 
                    Query_9674   272  GTGTATTACTGTGCCAGGGGGGCTAGTAGTGTTTATTACAGAGATGGCTTTGACTACTGGGGCCACGGAACCCTGGTCACCGTCTCCTCA  361
V  92.7% (266/287)  IGHV1-18*01  277  ..............G..-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  93.8% (15/16)    IGHD3-22*01  13   -----------------------........G.......---------------------------------------------------  28
J  97.7% (43/44)    IGHJ4*01     5    -----------------------------------------------..................A........................  47

                                       
                                       
                    Query_9674   362  G  362
J  97.7% (43/44)    IGHJ4*01     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_242759

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD6-13*01                                                                                           18.0    0.55  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CACG	AGCAGCTGG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACACGAGCAGCTGGATTGACTAC	ARDTSSWIDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9675   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ...............................G...........G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  T  G  S  T  N  Y  N  P  S  L  K  S  Q  F  T  I  S  V  D  T  S  K  N 
                    Query_9675   91   TGGATTGGGTATATCTTTTACACTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCAATTCACCATATCAGTAGACACGTCGAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  ................A.....G...................................G.G......................C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  S  S  W  I  D  Y  W 
                    Query_9675   181  CAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACACGAGCAGCTGGATTGACTACTGG  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-13*01  10   ---------------------------------------------------------------------.........------------  18
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------...........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_9675   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (42/42)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_242758

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           427     9e-122
IGHD1-26*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCG	AGTGGGAGCTACT	TGGGGCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTAC	ARDLEWELLGAFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	282	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  R  Y
                    Query_9676   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGATA  90
V  96.9% (282/291)  IGHV1-69*06  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  S  F  G  T  A  H  Y  A  Q
                    Query_9676   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTAGCTTTGGAACAGCACACTACGCACA  180
V  96.9% (282/291)  IGHV1-69*06  96   .................................................................T......T......A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  R  S  T  S  T  A  Y  M  E  L  S  S  L  S  S  E  D  T  A
                    Query_9676   181  GAGATTCCAGGGCAGAGTCACGATTACCGCGGACAGATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGCTCTGAGGACACGGC  270
V  96.9% (282/291)  IGHV1-69*06  186  ..AG...............................A.......................................A..............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  D  L  E  W  E  L  L  G  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9676   271  CGTGTATTACTGTGCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  96.9% (282/291)  IGHV1-69*06  276  .....................--------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                       
D  100.0% (13/13)   IGHD1-26*01  6    --------------------------.............--------------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     6    ----------------------------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_242752

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         300     8e-84
IGHD2-21*01                                                                                           12.2    32   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTTCTTTGGCGATTTCGA	CTATTC	GGGCCCCCTATCCACCCCACA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTCTTTGGCGATTTCGACTATTCGGGCCCCCTATCCACCCCACAAC	ARLSLAISTIRAPYPPHN	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	100	14	0	87.7
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	219	27	0	89


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  V  V  S  G  Y  S  I  N  N  G  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  L 
                    Query_9677     1    ACCCTGTCCCTCACCTGCGTTGTGTCTGGTTACTCCATCAACAATGGTTACTACTGGGGCTGGCTCCGGCAGCCCCCAGGAAAGGGGCTG  90
V  89.0% (219/246)  IGHV4-38-2*01  49   ...................C...C................G..G...................A................G.........  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  V  Y  H  R  G  D  A  Y  Y  N  P  S  L  K  S  R  V  T  V  S  M  D  T  S  S 
                    Query_9677     91   GAGTGGATTGGGAGTGTCTATCATCGCGGGGACGCGTACTACAATCCGTCCCTCAAGAGTCGAGTCACCGTCTCAATGGACACGTCCAGT  180
V  89.0% (219/246)  IGHV4-38-2*01  139  ...............A........A.T...AG.A.C........C........................A.A...G.A..........AG  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                         N  Q  V  S  L  S  L  R  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  S  L  A  I  S  T  I 
                    Query_9677     181  AATCAGGTCTCCCTGAGCCTGAGGTCTGTGACCGCCGCAGACACGGCTCTGTATTACTGTGCGAGACTTTCTTTGGCGATTTCGACTATT  270
V  89.0% (219/246)  IGHV4-38-2*01  229  ..C...T.........AG.....C.......................CG.................------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-21*01    22   -------------------------------------------------------------------------------------.....  26

                                        GT--------------------->                                  
                                         R  A  P  Y  P  P  H  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9677     271  CGGGCCCCCTATCCACCCCACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  100.0% (6/6)     IGHD2-21*01    27   .---------------------------------------------------------  27
J  100.0% (36/36)   IGHJ4*02       13   ----------------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_242751

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD2-21*01                                                                                           12.2    33   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	T	GCATACTGT	AATATCATCAACTGCTCCCCGCGGGAAGGTG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATGCATACTGTAATATCATCAACTGCTCCCCGCGGGAAGGTGTTGACTTC	AKDAYCNIINCSPREGVDF	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  Y  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9678   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTTAGCTACTATGCCATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-23*01  47   ....................................CC......AG...........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  D  G  N  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_9678   91   AGTGGGTCTCAAGTATTAGTGGCAGTGATGGTAACACATATTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-23*01  137  ...........GC.........T....G.....G......C..............................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  M  Y  H  C  A  K  D  A  Y  C  N  I  I  
                    Query_9678   181  AGAACACGCTGTATCTGCAGATGAATAGCCTGAGAGTCGAGGACACGGCCATGTATCACTGTGCGAAGGATGCATACTGTAATATCATCA  270
V  92.0% (230/250)  IGHV3-23*01  227  ...................A.....C..........C.............G.A...T..........A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.9% (8/9)      IGHD2-21*01  2    -----------------------------------------------------------------------.....T...----------  10

                                      -IMGT----------------------->                                  
                                      N  C  S  P  R  E  G  V  D  F  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_9678   271  ACTGCTCCCCGCGGGAAGGTGTTGACTTCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  333
J  95.2% (40/42)    IGHJ4*02     7    ---------------------......A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_242757

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD3-9*01                                                                                            44.9    5e-09
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GAC	ATTATGATATTTTGACTGGTTATTAT	TCGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATGATATTTTGACTGGTTATTATTCGGGCTTTGACTAC	ARHYDILTGYYSGFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	23	1	0	95.8
FR2-IMGT	49	99	51	49	2	0	96.1
CDR2-IMGT	100	123	24	24	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	228	221	7	0	96.9


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  R  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I  
                    Query_9679   14   GTGCAGCCTCTAGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCTACTATTA  103
V  96.9% (221/228)  IGHV3-23*01  65   ...........G......................................................................AG......  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  G  S  T  Y  Y  S  N  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_9679   104  GTGGTAGTGGTGGTAGCACATACTACTCAAACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGC  193
V  96.9% (221/228)  IGHV3-23*01  155  ..........................G..G............................................................  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  H  F  C  A  R  H  Y  D  I  L  T  G  Y  Y  S  G  F  D  
                    Query_9679   194  AAATGAACAGCCTGAGAGCCGAGGACACGGCCGTACATTTCTGTGCGAGACATTATGATATTTTGACTGGTTATTATTCGGGCTTTGACT  283
V  96.9% (221/228)  IGHV3-23*01  245  ...................................T...A........------------------------------------------  292
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  96.2% (25/26)    IGHD3-9*01   3    ---------------------------------------------------....C.....................-------------  28
J  100.0% (44/44)   IGHJ4*02     5    ----------------------------------------------------------------------------------........  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9679   284  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (44/44)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_242756

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           375     3e-106
IGHD6-25*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACAGTCACCGGCTTCACTGGT	CGGCTAC	CAA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACAGTCACCGGCTTCACTGGTCGGCTACCAAGACTAC	ARVQSPASLVGYQDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	265	25	0	91.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  N  Y
                    Query_9680   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCGGGAGGCACCTTCAGCAACTA  90
V  91.4% (265/290)  IGHV1-69*01  6    ..................G..........A.......................................T................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  F  M  P  I  F  G  A  A  D  Y  A  Q
                    Query_9680   91   TGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGTTCATGCCTATCTTTGGTGCAGCGGACTACGCCCA  180
V  91.4% (265/290)  IGHV1-69*01  96   ..C.................................G..................A....C............A....AA.......A..  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  A  T  I  T  A  D  E  S  T  G  T  S  Y  M  E  L  R  N  L  K  S  E  D  T  A
                    Query_9680   181  GAAGTTCCAAGACAGAGCCACCATTACCGCGGACGAATCCACGGGCACATCCTATATGGAACTGAGGAACCTGAAATCTGAAGACACGGC  270
V  91.4% (265/290)  IGHV1-69*01  186  .........G.G.....T...G.....................A.....G....C.....G.....C.G.....G......G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  V  Q  S  P  A  S  L  V  G  Y  Q  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9680   271  CGTATATTACTGTGCGAGAGTACAGTCACCGGCTTCACTGGTCGGCTACCAAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  91.4% (265/290)  IGHV1-69*01  276  ...G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  12   ------------------------------------------.......-----------------------------------------  18
J  100.0% (40/40)   IGHJ4*02     9    ----------------------------------------------------......................................  46

                                        
                                        
                    Query_9680   361  AG  362
J  100.0% (40/40)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_242755

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           341     5e-96
IGHD1-1*01                                                                                            16.1    2.1  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	AAACA	ACAACTGG	CGC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCAGAAAACAACAACTGGCGCAC	TRKQQLAH	249	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	236	18	0	92.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  C  S  G  F  A  F  A  D  D  A  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_9681   1    GGTCCCTGAGACTCTCCTGTACATGTTCTGGATTCGCCTTTGCTGATGATGCTATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.9% (236/254)  IGHV3-49*04  47   .......................GC..........A......G....T........A.................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  A  V  I  R  S  K  N  Y  D  G  T  T  E  F  A  A  S  V  K  G  R  F  A  I  S  R  D  
                    Query_9681   91   AGTGGGTAGCCGTCATTAGAAGCAAAAATTATGATGGGACAACAGAATTTGCCGCGTCTGTGAAAGGCAGATTCGCCATCTCAAGAGATG  180
V  92.9% (236/254)  IGHV3-49*04  137  .........GTT..............GC.....G..............AC........................A...............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------CDR3-IMGT-----
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  K  Q  Q  L  A  
                    Query_9681   181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAAGACACAGCCGTGTATTATTGTACCAGAAAACAACAACTGGCGC  270
V  92.9% (236/254)  IGHV3-49*04  227  ..............................................G.................C.....T...----------------  300
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (8/8)     IGHD1-1*01   4    -------------------------------------------------------------------------------........---  11

                                      ->                                  
                                      H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9681   271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (36/36)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_242754

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            358     4e-101
IGHD1-26*01                                                                                           14.1    8.9   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCG	GTGGGAG	TCCCCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATGCGGTGGGAGTCCCCCCCTACTTTGACTAC	ARDAVGVPPYFDY	269	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	41	4	0	91.1
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	154	27	25	2	0	92.6
FR3-IMGT	155	268	114	102	12	0	89.5
CDR3-IMGT (germline)	269	276	8	8	0	0	100
Total	N/A	N/A	275	252	23	0	91.6


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  L  V  S  R  N  G  A  A  W  N  W  I  R 
                    Query_9682   2    CTGGTGAAACCCACACAGACCCTCTCACTCACATGTGCCATCTCCGGGGACCTTGTCTCTAGGAACGGTGCTGCTTGGAATTGGATCAGG  91
V  91.6% (252/275)  IGHV6-1*01   31   ........G...T.G.................C..................AG.........C...A.............C.........  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  G  S  K  W  Y  N  D  Y  A  V  S  L  R  G  R 
                    Query_9682   92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATATTACGGGTCCAAGTGGTATAATGATTATGCAGTATCTCTGAGAGGTCGA  181
V  91.6% (252/275)  IGHV6-1*01   121  .........................................C...A................................G...A.A.....  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  I  I  S  P  D  T  S  N  N  L  F  S  L  H  L  N  S  V  T  P  E  D  T  A  M  Y  Y  C  A 
                    Query_9682   182  ATAATCATCAGCCCAGACACTTCCAACAACCTCTTCTCCCTGCACCTGAACTCGGTGACTCCCGAGGACACGGCTATGTATTACTGTGCA  271
V  91.6% (252/275)  IGHV6-1*01   211  ....C.....A.........A.....G....AG...........G........T.....................G..............  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      ------------CDR3-IMGT-------------->                                  
                                       R  D  A  V  G  V  P  P  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9682   272  AGAGATGCGGTGGGAGTCCCCCCCTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  341
V  91.6% (252/275)  IGHV6-1*01   301  .....-----------------------------------------------------------------  305
                                       R                                                                    
D  100.0% (7/7)     IGHD1-26*01  7    ---------.......------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    -----------------------.........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_103588

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           339     2e-95
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GTC	TACAACTGG	CGGGAGGGGGCGTTCC	CTACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTCTACAACTGGCGGGAGGGGGCGTTCCCTAC	GLQLAGGGVPY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9683   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGCAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.7% (230/243)  IGHV3-33*01  47   ...........................................T.GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  S  N  K  H  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_9683   91   AGTGGGTGGCAATTATATGGTATGATGGAAGTAACAAACACTATGCAGACTCCGTCCAGGGCCGATTCACCATATCCAGAGACAATTCCA  180
V  94.7% (230/243)  IGHV3-33*01  137  ...........G......................T...T................GA................C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  G  L  Q  L  A  G  G  G  V  
                    Query_9683   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCTGTATATTACTGTGGTCTACAACTGGCGGGAGGGGGCGTTC  270
V  94.7% (230/243)  IGHV3-33*01  227  ........C...........................C...G...........G..........---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (9/9)     IGHD1-1*01   3    ------------------------------------------------------------------.........---------------  11

                                      ---->                                  
                                      P  Y  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_9683   271  CCTACAGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.4% (37/38)    IGHJ4*02     11   -....T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_103580

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           416     2e-118
IGHD2-2*01                                                                                            10.3    134   
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCAAGGC	ACCAG	TTCCCTCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCAAGGCACCAGTTCCCTCTTACTTTGACTAC	ARDPKAPVPSYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  F  T  Y 
                    Query_9684   2    CAGCTGGTGCAGTCTGGAGCCGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCCGGTTACACCTTTTTCACCTAC  91
V  95.9% (278/290)  IGHV1-18*04  7    ....................T...............................................T............AC..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  S  N  Y  A  Q 
                    Query_9684   92   GGCATCCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACTCAAACTATGCACAG  181
V  95.9% (278/290)  IGHV1-18*04  97   ..T...AG...................................................................A..............  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  Y  D  D  T  A 
                    Query_9684   182  AAACTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTCAGATATGACGACACGGCC  271
V  95.9% (278/290)  IGHV1-18*04  187  ..G....................................................................G....C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  D  P  K  A  P  V  P  S  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9684   272  GTGTATTACTGTGCGAGAGATCCCAAGGCACCAGTTCCCTCTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  95.9% (278/290)  IGHV1-18*04  277  ....................--------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (5/5)     IGHD2-2*01   17   -----------------------------.....------------------------------------------------------  21
J  100.0% (46/46)   IGHJ4*02     3    ------------------------------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_103582

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           382     4e-108
IGHD1-1*01                                                                                            14.1    9.2   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GGGAGGGGG	CAACTGG	GAACCCTTTAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTAC	ARGGGNWEPFTY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	288	266	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  Y
                    Query_9685   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCTA  90
V  92.4% (266/288)  IGHV5-51*01  6    .................................................................G............C......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  L  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  I  V  F  P  D  D  S  D  T  R  Y  S  P
                    Query_9685   91   CTGGCTCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGATCGTTTTTCCTGATGACTCTGATACCAGATACAGCCC  180
V  92.4% (266/288)  IGHV5-51*01  96   ....A.............C..G.........A..........G............A.C.A.....G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  I  T  I  S  A  D  K  S  I  T  T  A  F  L  Q  W  N  S  L  K  A  S  D  S  A
                    Query_9685   181  GTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCACCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACTCCGC  270
V  92.4% (266/288)  IGHV5-51*01  186  .......C.......GG...........................G........A...........G...................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  G  N  W  E  P  F  T  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9685   271  CATCTATTACTGTGCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.4% (266/288)  IGHV5-51*01  276  ...G...........G..-----------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------.......-------------------------------------------------  11
J  100.0% (38/38)   IGHJ4*02     11   ---------------------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_103583

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           333     1e-93
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	C	GGGACTTATGC	CAACTCGCCA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGACTTATGCCAACTCGCCATACTGGTACTTCGATCTC	ASGTYANSPYWYFDL	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  D  S  I  G  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_9686   4    CCCTGAGACTCTCCTGTAGTGTCTCTGGTGACTCCATCGGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  93.1% (230/247)  IGHV4-39*02  50   .....TCC...A....C.C...........G.......A...................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  A  S  I  Y  Y  T  G  S  A  Y  H  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  
                    Query_9686   94   TGGAGTGGATTGCGAGTATCTATTATACTGGGAGCGCCTACCACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCCA  183
V  93.1% (230/247)  IGHV4-39*02  140  ............G..............G.......A.....T...............................A................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      N  N  H  F  S  L  Q  L  S  S  V  T  D  A  D  T  A  V  Y  Y  C  A  S  G  T  Y  A  N  S  P  
                    Query_9686   184  ACAACCACTTCTCCCTGCAGCTGAGCTCTGTGACCGACGCAGACACGGCTGTCTATTACTGTGCGAGCGGGACTTATGCCAACTCGCCAT  273
V  93.1% (230/247)  IGHV4-39*02  230  .G...............A..................C...............G..............-----------------------  296
                                      K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  90.9% (10/11)    IGHD3-16*01  20   --------------------------------------------------------------------....G......-----------  30
J  100.0% (52/52)   IGHJ2*01     2    -----------------------------------------------------------------------------------------.  2

                                      ---------------->                                  
                                      Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9686   274  ACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
J  100.0% (52/52)   IGHJ2*01     3    ...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_103584

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            18.0    0.59 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGCCTCGTGCCTG	GGAGTGGTT	TTGAGGCTATTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGCCTCGTGCCTGGGAGTGGTTTTGAGGCTATTCCTGACTAC	AKSLVPGSGFEAIPDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9687   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTTAGTAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-23*01  47   ............................T..............C.............G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  G  I  T  G  S  G  D  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9687   91   AGTGGCTCTCAGGTATTACTGGCAGTGGCGATAACACCTACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (235/248)  IGHV3-23*01  137  .....G......C.....G...T.....T.G..G...A....................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  S  L  V  P  G  S  G  
                    Query_9687   181  AGAACACGCTGTATCTGCAAATAAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAAAAGCCTCGTGCCTGGGAGTGGTT  270
V  94.8% (235/248)  IGHV3-23*01  227  ......................G.............................A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD3-3*01   15   ---------------------------------------------------------------------------------.........  23

                                      T------------------>                                  
                                      F  E  A  I  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9687   271  TTGAGGCTATTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (41/41)   IGHJ4*02     8    -------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_103585

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           339     2e-95
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CATGCTTTCCTCGACTGATATGT	CGTTCGGGGGA	TTTTTGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACATGCTTTCCTCGACTGATATGTCGTTCGGGGGATTTTTGATTGACCAG	ARDMLSSTDMSFGGFLIDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	234	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  S  S  R  S  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_9688   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGACTCCATCAGCAGTAGAAGTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGG  90
V  93.2% (234/251)  IGHV4-39*02  49   ...................C...........G...............T...........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  E  S  R  V  A  I  S  K  D  T  S 
                    Query_9688   91   CTGGAATGGATTGGGAATATCTATTATAGTGGGAGCACCGACTACAACCCGTCCCTCGAGAGTCGAGTCGCCATATCGAAAGACACGTCC  180
V  93.2% (234/251)  IGHV4-39*02  139  .....G..........G......................T.................A...........A.......CGT..........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  M  L  S  S  T  D 
                    Query_9688   181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACCGCCGCAGACACGGCTATTTATTACTGTGCGAGAGACATGCTTTCCTCGACTGAT  270
V  93.2% (234/251)  IGHV4-39*02  229  ........C............C....C........................G.G.................-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       M  S  F  G  G  F  L  I  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9688   271  ATGTCGTTCGGGGGATTTTTGATTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  90.9% (10/11)    IGHD3-16*01  13   ----....T......-------------------------------------------------  23
J  95.2% (40/42)    IGHJ4*02     7    ----------------------.....T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_103586

Length=413
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            364     6e-103
IGHD3-16*02                                                                                           14.1    10    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD3-16*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGGAGAGGTCCCCCC	TTATCGT	CCGAAATGGGTACAGTCATACAGA	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGGAGAGGTCCCCCCTTATCGTCCGAAATGGGTACAGTCATACAGATGGCTCGACCCC	ARVGEVPPYRPKWVQSYRWLDP	292	357	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	66	9	0	88
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	46	5	0	90.2
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	101	13	0	88.6
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	295	264	31	0	89.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  R  E  P  G  A  S  V  T  V  S  C  K  A  S  G  Y  T  F  S 
                    Query_9689   4    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAGGGAGCCTGGGGCCTCAGTGACAGTCTCCTGTAAGGCTTCCGGATACACCTTCAGC  93
V  89.5% (264/295)  IGHV1-8*01   1    .....G.....G...........G..........A.A..................AG........C........T.............C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  D  I  N  W  V  R  Q  A  S  G  Q  R  P  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 
                    Query_9689   94   AATTATGATATCAACTGGGTGAGACAGGCCAGTGGACAAAGACCTGAGTGGATGGGATGGATGAATCCTAACAGTGGTAACACTGGCTAC  183
V  89.5% (264/295)  IGHV1-8*01   91   .G...................C.........C.......G.G.T.....................C.................A.....T  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  F  Q  D  R  V  T  M  T  R  D  T  S  I  G  T  A  Y  M  Q  L  I  S  L  R  P  E  D 
                    Query_9689   184  GCACAGAACTTTCAGGACAGAGTCACCATGACCAGGGACACCTCCATAGGCACAGCCTACATGCAGTTGATAAGCCTGCGACCTGAGGAC  273
V  89.5% (264/295)  IGHV1-8*01   181  ........G..C....G...................A...........A..............G..C...GC......A..T........  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------------------CDR3-IMGT--------------------------->      
                                       T  A  V  Y  Y  C  A  R  V  G  E  V  P  P  Y  R  P  K  W  V  Q  S  Y  R  W  L  D  P  W  G 
                    Query_9689   274  ACGGCCGTTTATTACTGTGCGAGAGTGGGAGAGGTCCCCCCTTATCGTCCGAAATGGGTACAGTCATACAGATGGCTCGACCCCTGGGGC  363
V  89.5% (264/295)  IGHV1-8*01   271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD3-16*02  25   -----------------------------------------.......------------------------------------------  31
J  95.7% (44/46)    IGHJ5*02     6    ------------------------------------------------------------------------...T..............  23

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_9689   364  CAGGGAACCCTGGTCACCGTCTCGTCAG  391
J  95.7% (44/46)    IGHJ5*02     24   .......................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40498920


Query= Query_103587

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            382     4e-108
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGATC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGATCCAGCTCGTATCCGACTTC	ARALRIQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	267	23	0	92.1


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_9690  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  92.1% (267/290)  IGHV1-8*02  6    ..................G..........................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_9690  91   TGATATCACCTGGGTGCGACAAGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  92.1% (267/290)  IGHV1-8*02  96   ........A............G............................................C.......................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  A  M  S  R  L  N  A  E  G  T  A
                    Query_9690  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGCGATGAGCCGCCTCAACGCTGAAGGCACGGC  270
V  92.1% (267/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A................A.C.....A....G.GAT....G.A......  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  I  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9690  271  CGTATATTACTGTGCGAGAGCGCTGAGGATCCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.1% (267/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_334702

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            341     5e-96
IGHD3-16*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TTGGCCCCGGATTCAGATATATGGGG	TTGGGGGAG	N/A	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATATTGGCCCCGGATTCAGATATATGGGGTTGGGGGAGTAC	ARDIGPGFRYMGLGEY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	252	10	9	1	0	90
Total	N/A	N/A	252	235	17	0	93.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  D  Y  A  M  H  W  F  R  Q  V  P  G  K  G  L  
                    Query_9691   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGAAGATTATGCCATGCATTGGTTCCGGCAAGTTCCAGGGAAGGGCCTGG  90
V  93.3% (235/252)  IGHV3-9*01   47   ...........................................T..............C...G.........C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  S  S  T  K  I  G  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9691   91   AGTGGGTCTCAGGTATTAATTGGAGTAGTACTAAAATAGGCTATGCGGACGCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.3% (235/252)  IGHV3-9*01   137  ..................G.....A....GG..GC...............T.......................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  K  S  L  Y  V  Q  M  N  N  L  R  P  E  D  T  A  L  Y  Y  C  A  R  D  I  G  P  G  F  R  
                    Query_9691   181  AGAAGTCCCTGTATGTACAAATGAACAATCTGAGACCTGAGGACACGGCCTTGTATTACTGTGCAAGAGATATTGGCCCCGGATTCAGAT  270
V  93.3% (235/252)  IGHV3-9*01   227  ....C.........C.G..........G.......G..............................A.....------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                      T------------------>                                  
                                      Y  M  G  L  G  E  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_9691   271  ATATGGGGTTGGGGGAGTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  324
D  100.0% (9/9)     IGHD3-16*01  16   --------.........-------------------------------------  24
J  97.3% (36/37)    IGHJ4*02     12   -----------------................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_92676

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_9692   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  98.3% (284/289)  IGHV5-51*03  6    ..............................................................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_9692   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ...................................................G............................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9692   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9692   271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  98.3% (284/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_1685

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           433     1e-123
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_9693   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  97.9% (283/289)  IGHV5-51*01  6    .............................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_9693   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  97.9% (283/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  G  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9693   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCGGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (283/289)  IGHV5-51*01  186  .............................C.............A..............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9693   271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  97.9% (283/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_9693   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_156642

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            394     6e-112
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	AATGGCG	ATAGCACTGGCTGGT	GT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAAATGGCGATAGCACTGGCTGGTGTTACTTTGACTAC	ARNGDSTGWCYFDY	273	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	49	2	0	96.1
CDR2-IMGT	132	158	27	24	3	0	88.9
FR3-IMGT	159	272	114	109	5	0	95.6
CDR3-IMGT (germline)	273	278	6	6	0	0	100
Total	N/A	N/A	278	265	13	0	95.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  T  I  S  G  D  S  I  S  S  N  N  A  A  W  N  W  
                    Query_9694   1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTACCATCTCCGGGGACAGTATCTCTAGCAACAATGCTGCTTGGAACTGGA  90
V  95.3% (265/278)  IGHV6-1*01   26   .........................................G.................G............G.................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  G  Q  S  P  S  R  G  L  E  W  L  G  R  A  Y  Y  R  S  K  W  Y  D  D  Y  S  V  S  V  K  
                    Query_9694   91   TCGGGCAGTCCCCATCGCGAGGCCTTGAGTGGCTGGGAAGGGCATATTACAGGTCCAAGTGGTATGATGATTATTCAGTCTCTGTGAAGA  180
V  95.3% (265/278)  IGHV6-1*01   116  ..A..............A.......................A....C..................A........G....A........A.  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_9694   181  GTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCTCTGCAACTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  95.3% (265/278)  IGHV6-1*01   206  ...........................................C.....G........................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------------CDR3-IMGT--------------->                                  
                                      C  A  R  N  G  D  S  T  G  W  C  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9694   271  GTGCAAGAAATGGCGATAGCACTGGCTGGTGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  348
V  95.3% (265/278)  IGHV6-1*01   296  ........----------------------------------------------------------------------  303
                                      C  A  R                                                                       
D  93.3% (14/15)    IGHD6-19*01  5    ---------------......G........------------------------------------------------  19
J  100.0% (46/46)   IGHJ4*02     3    --------------------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_159950

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  H
                    Query_9695   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATCA  90
V  92.4% (268/290)  IGHV5-51*01  6    ....................C........A.....................G.........A......C.........C.......GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  P
                    Query_9695   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCCC  180
V  92.4% (268/290)  IGHV5-51*01  96   ...................................................G.......A.....G.......G....C.....C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  A
                    Query_9695   181  GTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCGC  270
V  92.4% (268/290)  IGHV5-51*01  186  ...............G........C...................................G.......G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_9695   271  CTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  350
V  92.4% (268/290)  IGHV5-51*01  276  .A.......C.....G....------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    -----------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_270727

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           297     8e-83
IGHD3-10*01                                                                                           12.2    33   
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCACCGGTGGAGCAATGGCCGGGGAACA	TACTAT	AAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCACCGGTGGAGCAATGGCCGGGGAACATACTATAATTACGGTATGGACGCC	ARGHRWSNGRGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	21	3	6	70
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	221	21	6	89.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  T  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_9696   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGCCCTTCACTGACAGTGGTTATTATTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  89.1% (221/248)  IGHV4-34*12  49   .......................C..T......T......------.......C..C....G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  I  D  T  S 
                    Query_9696   91   CTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAACCCGTCCCTCCAGAGTCGAGTCACCATATCAATAGACACGTCC  180
V  89.1% (221/248)  IGHV4-34*12  133  .....G.............T.......AG.....G......................A....................G...........  222
                                       L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  W  S  N  G 
                    Query_9696   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGGGGCCACCGGTGGAGCAATGGC  270
V  89.1% (221/248)  IGHV4-34*12  223  ....................GC............C........................C........----------------------  290
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      DR3-IMGT------------------------>                                 
                                       R  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_9696   271  CGGGGAACATACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  100.0% (6/6)     IGHD3-10*01  5    ---------......---------------------------------------------------  10
J  93.8% (45/48)    IGHJ6*02     15   ------------------.............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_270726

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           350     8e-99
IGHD3-3*01                                                                                            25.7    0.003
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTTTCCGGGAAG	TACGATTTTGGGAGTG	CCTTAGGGGGTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTTTCCGGGAAGTACGATTTTGGGAGTGCCTTAGGGGGTCTTGACTAC	AKDLSGKYDFGSALGGLDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  H  Y  G  V  H  W  V  R  Q  A  P  A  K  G  L  
                    Query_9697   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTCACTATGGGGTGCACTGGGTCCGCCAGGCTCCAGCCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-30*18  47   ....................G.......................AG......CA........................G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  A  A  L  I  T  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9697   91   AGTGGGCGGCACTTATAACATACGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (237/250)  IGHV3-30*18  137  ......T....G.....T....T...................................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  L  S  G  K  Y  D  
                    Query_9697   181  AGAACACGGTGTATCTGCAAATGAACAGCCTGAGACCTGAGGACACGGCTGTATATTACTGTGCGAAAGATCTTTCCGGGAAGTACGATT  270
V  94.8% (237/250)  IGHV3-30*18  227  ........C..........................G................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD3-3*01   5    -----------------------------------------------------------------------------------.......  11

                                      -IMGT----------------------->                                  
                                      F  G  S  A  L  G  G  L  D  Y  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_9697   271  TTGGGAGTGCCTTAGGGGGTCTTGACTACTGGGGCCAGGGCACCCTGATCACCGTCTCCTCAG  333
D  93.8% (15/16)    IGHD3-3*01   12   ..T......------------------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    ---------------------...................A......G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_270725

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           452     3e-129
IGHD6-13*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAC	ATAGCAGCAGCTGGT	CGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTAC	ARSHSSSWSGFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	289	0	0	100


Alignments

                                       <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                     Query_9698   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  100.0% (289/289)  IGHV5-51*03  6    ..........................................................................................  95
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                       ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                         W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                     Query_9698   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  100.0% (289/289)  IGHV5-51*03  96   ..........................................................................................  185
                                         W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                       ------------------------------------------FR3-IMGT----------------------------------------
                                         S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                     Query_9698   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  100.0% (289/289)  IGHV5-51*03  186  ..........................................................................................  275
                                         S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                       ------------><--------------CDR3-IMGT-------------->                                  
                                         M  Y  Y  C  A  R  S  H  S  S  S  W  S  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_9698   271  CATGTATTACTGTGCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  100.0% (289/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                         M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)    IGHD6-13*01  5    -----------------------...............------------------------------------------------  19
J  100.0% (44/44)    IGHJ4*02     5    ------------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_92675

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           386     1e-109
IGHD3-10*01                                                                                           23.8    0.011 
IGHJ1*01                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TAACGGCG	GGTTCGGGGAGT	N/A	CTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAACGGCGGGTTCGGGGAGTCTGAATACTTCCAGCAC	ARHNGGFGESEYFQH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	249	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9699   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  99.2% (249/251)  IGHV4-39*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  C  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9699   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACTGCCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  99.2% (249/251)  IGHV4-39*01  139  .............................................AA...........................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  N  G  G  F  G  E 
                    Query_9699   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATAACGGCGGGTTCGGGGAG  270
V  99.2% (249/251)  IGHV4-39*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD3-10*01  11   -------------------------------------------------------------------------------...........  21

                                      ----------------->                                  
                                       S  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9699   271  TCTGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (12/12)   IGHD3-10*01  22   .---------------------------------------------------  22
J  100.0% (51/51)   IGHJ1*01     2    -...................................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_270722

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9700   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9700   91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*01  139  ........GT........T.......G...............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_9700   181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.5% (234/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9700   271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_270720

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     3e-93
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAACT	CAGTGGCTGG	ATTCGGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACTCAGTGGCTGGATTCGGGGTACTTTGACTCC	ARGTQWLDSGYFDS	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	49	2	0	96.1
CDR2-IMGT	100	123	24	23	1	0	95.8
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	232	222	10	0	95.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  A  F  R  S  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 
                    Query_9701   13   TGTGCAGCCTCTGGATTCGCCTTCAGGAGCTATGGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATATATT  102
V  95.7% (222/232)  IGHV3-21*01  64   ..................A.......T......A...................................................CC...  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  T  S  S  Y  I  Y  Y  A  D  S  L  E  G  R  F  T  I  S  R  D  N  A  K  N  S  L  D  L 
                    Query_9701   103  AGTAGTACTAGTAGTTACATATACTACGCAGACTCACTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGGATCTG  192
V  95.7% (222/232)  IGHV3-21*01  154  .......G............................G..A............................................T.....  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------------CDR3-IMGT--------------->   
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  T  Q  W  L  D  S  G  Y  F  D  S  W 
                    Query_9701   193  CAAATGAACAGCCTGCGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGAACTCAGTGGCTGGATTCGGGGTACTTTGACTCCTGG  282
V  95.7% (222/232)  IGHV3-21*01  244  ...............A....................................--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (10/10)   IGHD6-19*01  9    ---------------------------------------------------------..........-----------------------  18
J  95.7% (44/46)    IGHJ4*02     3    ---------------------------------------------------------------------------..........A....  17

                                                                     
                                       G  Q  G  T  P  V  T  V  S  S  
                    Query_9701   283  GGCCAGGGAACCCCGGTCACCGTCTCCTCAG  313
J  95.7% (44/46)    IGHJ4*02     18   .............T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_1680

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           360     1e-101
IGHD3-16*01                                                                                           12.2    31    
IGHJ2*01                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TGCTTA	CAATACTA	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTGCTTACAATACTAGGTACTTCGATCTC	ARAAYNTRYFDL	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	238	8	0	96.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  A  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9702   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGCCAGTAGCAACTACATGTCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.7% (238/246)  IGHV3-53*01  47   .......................................T................AG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_9702   91   AGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCCTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  96.7% (238/246)  IGHV3-53*01  137  ..................................................G.......................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  T  V  F  L  H  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  A  Y  N  T  R  Y  F  
                    Query_9702   181  ACACGGTGTTTCTTCACATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAGAGCTGCTTACAATACTAGGTACTTCG  270
V  96.7% (238/246)  IGHV3-53*01  227  .....C...A......A................................G................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (6/6)     IGHD3-16*01  28   -------------------------------------------------------------------......-----------------  33
J  100.0% (48/48)   IGHJ2*01     6    ---------------------------------------------------------------------------------.........  14

                                      ---->                                  
                                      D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9702   271  ATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  309
J  100.0% (48/48)   IGHJ2*01     15   .......................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_330857

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           363     1e-102
IGHD2-21*01                                                                                           12.2    31    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGAACCCCG	TATTCC	CGTCGCCA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGATGAACCCCGTATTCCCGTCGCCAAC	VRDEPRIPVAN	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  V  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9703   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACTGTTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-48*03  47   ..........................................G.AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  G  G  S  T  I  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_9703   91   AGTGGGTTTCATACATTAGTAGTGGTGGTTCTACCATATACTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (241/250)  IGHV3-48*03  137  .......................A.....AG..........................A................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  E  P  R  I  P  V  
                    Query_9703   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGTGCGAGATGAACCCCGTATTCCCGTCG  270
V  96.4% (241/250)  IGHV3-48*03  227  ...............................................................C.A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*01  23   -------------------------------------------------------------------------------......-----  28

                                      ---->                                  
                                      A  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9703   271  CCAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (36/36)   IGHJ4*02     13   ---....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_270729

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           364     5e-103
IGHD3-16*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CACTCAATCGAGGACTCCG	TGCTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACTCAATCGAGGACTCCGTGCTTATTACTTTGATCAT	ATLNRGLRAYYFDH	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	260	27	0	90.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  R  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  A  T  H
                    Query_9704   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGAGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACAGTTTTGCCACACA  90
V  90.6% (260/287)  IGHV5-51*03  6    ..............................A......G............................T...........C...A...GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  T  D  S  E  T  H  Y  S  P
                    Query_9704   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTACTGACTCTGAAACCCACTACAGCCC  180
V  90.6% (260/287)  IGHV5-51*03  96   ............................................................T...GG.........T...AGA........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  R  S  I  T  T  A  Y  L  Q  W  N  T  L  R  A  S  D  T  A
                    Query_9704   181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACAGATCCATCACTACCGCCTACCTGCAGTGGAACACATTGAGGGCCTCGGACACCGC  270
V  90.6% (260/287)  IGHV5-51*03  186  ........A..........................AG.......GC...................G..GCC...A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  T  L  N  R  G  L  R  A  Y  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9704   271  CATATATTACTGCGCGACACTCAATCGAGGACTCCGTGCTTATTACTTTGATCATTGGGGCCAGGGAACCCTGGTCACAGTCTCCTCAG  359
V  90.6% (260/287)  IGHV5-51*03  276  ...G........T....------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                          
D  100.0% (7/7)     IGHD3-16*01  28   ------------------------------------.......----------------------------------------------  34
J  91.3% (42/46)    IGHJ4*02     3    -------------------------------------------........CT.C.......................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_270728

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           321     7e-90
IGHD3-10*01                                                                                           12.2    33   
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCCGATCA	ACTTTGGTT	TCTTGGGACCACAGTCGGGATTG	TACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCCGATCAACTTTGGTTTCTTGGGACCACAGTCGGGATTGTACTCTGACTAC	ARSPINFGFLGPQSGLYSDY	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  K 
                    Query_9705   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCCTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGAAG  90
V  92.2% (224/243)  IGHV4-34*01  49   ....................................T..............................................G...G..  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  L  R  G  G  T  N  Y  H  P  S  L  K  S  R  A  S  I  S  T  D  A  S  K  N 
                    Query_9705   91   TGGATTGGGGAAATCAATCTTCGTGGAGGCACCAACTACCACCCGTCCCTCAAGAGTCGGGCCTCCATATCAACGGACGCGTCGAAGAAT  180
V  92.2% (224/243)  IGHV4-34*01  139  ...................A.A.....A...........A...................A.T.A........GTA...A....C.....C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  I  N  F  G  F  L  G 
                    Query_9705   181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCCGCGGACACGGCTGTATATTACTGTGCGAGAAGCCCGATCAACTTTGGTTTCTTGGGA  270
V  92.2% (224/243)  IGHV4-34*01  229  ...................GC..........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (8/9)      IGHD3-10*01  6    -------------------------------------------------------------------------...A.....--------  14

                                      GT------------------------>                                  
                                       P  Q  S  G  L  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9705   271  CCACAGTCGGGATTGTACTCTGACTACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  331
J  95.7% (44/46)    IGHJ4*02     3    ---------------....T..................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_349522

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           375     3e-106
IGHD4-17*01                                                                                           18.0    0.60  
IGHJ6*02                                                                                              106     3e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCA	ACGGTGACT	CGGAGGGATTTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAACGGTGACTCGGAGGGATTTGGCTACTACTACGGTATGGACGTC	ARGNGDSEGFGYYYGMDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9706   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAACAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.0% (245/250)  IGHV4-31*01  49   ...............................G........G..........T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 
                    Query_9706   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACGTCT  180
V  98.0% (245/250)  IGHV4-31*01  139  ..........................................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  N  Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  N  G  D  S  E  G 
                    Query_9706   181  AAGAACCAGTTCTCCCTGAAGGTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCAACGGTGACTCGGAGGGA  270
V  98.0% (245/250)  IGHV4-31*01  229  .....................C...G............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD4-17*01  6    -------------------------------------------------------------------------.........--------  14

                                      -IMGT--------------------->                                 
                                       F  G  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9706   271  TTTGGCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
J  100.0% (55/55)   IGHJ6*02     8    -----.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_349523

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           299     3e-83
IGHD1-26*01                                                                                           12.2    35   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTCTGGATCTCT	TGGGAG	GCGACACTAACG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCTGGATCTCTTGGGAGGCGACACTAACGAC	ATLDLLGGDTND	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	43	8	0	84.3
CDR2-IMGT	146	169	24	16	8	0	66.7
FR3-IMGT	170	283	114	94	20	0	82.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	239	48	0	83.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  A  G  S  T  V  K  V  S  C  K  T  S  R  A  T  F  S  S  N
                    Query_9707   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGGCTGGGTCCACGGTGAAGGTCTCCTGCAAGACTTCCAGGGCCACCTTCAGCAGCAA  90
V  83.3% (239/287)  IGHV1-69*06  6    ..................G...............C........T....................G....TG.A.G.............T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        T  F  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  A  I  I  P  T  L  R  T  T  N  Y  A  Q
                    Query_9707   91   CACCTTCACTTGGGTGCGCCAGGCCCCGGGACAAGGGCTTGAGTGGATGGGGGCCATCATCCCCACCCTGCGCACGACAAACTACGCACA  180
V  83.3% (239/287)  IGHV1-69*06  96   TG.TA...GC........A........T.......................A.GG........T.T.T.TG.T..AG.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  R  S  S  S  T  S  Y  M  G  L  S  G  L  T  P  E  D  T  A
                    Query_9707   181  GAGGTTCCAAGGCAGAGTCACCATAACCGCGGACAGGTCTTCGAGTACAAGTTATATGGGACTGAGCGGTCTGACTCCTGAGGACACGGC  270
V  83.3% (239/287)  IGHV1-69*06  186  ..A......G...........G..T..........AA..CA....C...GCC..C....AG......A.C....GAT.............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  T  L  D  L  L  G  G  D  T  N  D  W  G  P  G  T  L  V  T  V  S  S  
                    Query_9707   271  CGTGTATTACTGTGCGACTCTGGATCTCTTGGGAGGCGACACTAACGACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  353
V  83.3% (239/287)  IGHV1-69*06  276  .................------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                    
D  100.0% (6/6)     IGHD1-26*01  8    -----------------------------......------------------------------------------------  13
J  97.2% (35/36)    IGHJ4*02     13   -----------------------------------------------.........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_349520

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            414     6e-118
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	N/A	AGTACCAGCTGCT	CCCGGCACT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGAGTACCAGCTGCTCCCGGCACTTACTACTACTATGGTATGGACGTC	ARGVPAAPGTYYYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  N  Y
                    Query_9708  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATACACCTTCAGCAATTA  90
V  95.5% (278/291)  IGHV1-8*01  6    ..................G...............................................T................C..G...  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  N  W  V  R  Q  T  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_9708  91   TGATATCAACTGGGTGCGGCAGACCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACA  180
V  95.5% (278/291)  IGHV1-8*01  96   ..................A...G...................................................................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  D  L  S  S  L  R  S  E  D  T  A
                    Query_9708  181  AAAGTTTAAGGGCAGAGTCACCATGACCAGGGACACCTCCATAAGCACAGCCTACATGGACCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.5% (278/291)  IGHV1-8*01  186  G.....CC.......................A............................G.............................  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><----------------------CDR3-IMGT--------------------->                       
                                       V  Y  Y  C  A  R  G  V  P  A  A  P  G  T  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  A
                    Query_9708  271  CGTCTATTACTGTGCGCGAGGAGTACCAGCTGCTCCCGGCACTTACTACTACTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGC  360
V  95.5% (278/291)  IGHV1-8*01  276  ...G............A....---------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R  G                                                                     
D  100.0% (13/13)   IGHD2-2*01  14   ---------------------.............--------------------------------------------------------  26
J  96.5% (55/57)    IGHJ6*02    6    -------------------------------------------...........C.................................A.  52

                                               
                                       V  S  S 
                    Query_9708  361  CGTCTCCTCA  370
J  96.5% (55/57)    IGHJ6*02    53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_349521

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           321     7e-90
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CGTACTGG	ATTACGATGTTTTGAGTGGTTAT	CC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCGTACTGGATTACGATGTTTTGAGTGGTTATCCCTACTTTGACTAC	AVLDYDVLSGYPYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	245	2	2	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  T  S  S  T  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_9709   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCACCAGCAGTACTTACTACTGGGCCTGGATCCGCCAGCCCCCCGGGAAGGGC  90
V  91.8% (225/245)  IGHV4-39*01  49   ...............................G........G...T....G...........G..................A........G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  S  G  G  S  T  Y  Y  N  P  S  L  E  S  R  I  T  V  S  I  A  T  S 
                    Query_9709   91   CTGGAGTGGATTGGGAGTATCTATTCTGGTGGGAGCACCTACTACAACCCGTCCCTCGAGAGTCGCATCACCGTTTCCATAGCCACGTCG  180
V  91.8% (225/245)  IGHV4-39*01  139  .........................A.A.............................A.......AG.....A.A...G...A......C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       R  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  V  L  D  Y  D  V  L  S 
                    Query_9709   181  AGGAACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGCCGTACTGGATTACGATGTTTTGAGT  270
V  91.8% (225/245)  IGHV4-39*01  229  .A.......................G...........................G...........-------------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  91.3% (21/23)    IGHD3-3*01   3    -------------------------------------------------------------------------........T...G....  19

                                      GT------------------>                                  
                                       G  Y  P  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9709   271  GGTTATCCCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  91.3% (21/23)    IGHD3-3*01   20   ......-------------------------------------------------  25
J  100.0% (47/47)   IGHJ4*02     2    --------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_349526

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           408     4e-116
IGHD7-27*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	TCCGGGA	AACTGGGG	TAGGA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATCCGGGAAACTGGGGTAGGAGACTAC	AIRETGVGDY	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	274	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  R  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  R  S  Y
                    Query_9710   1    GCAGCTGGTGCAGTCTGGAGCCGAGGTGAAGAGGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGGAGCTA  90
V  95.5% (274/287)  IGHV1-69*01  6    ..................G..T..........A...................................................C.....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  G  I  I  P  L  F  R  T  P  N  Y  A  Q
                    Query_9710   91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGAGGGATCATCCCTCTCTTTCGGACACCAAACTACGCACA  180
V  95.5% (274/287)  IGHV1-69*01  96   ..............................................A.................A.....G.T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  Q  L  S  S  L  R  S  E  D  T  A
                    Query_9710   181  GAAGTTCCAGGACAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGCAACTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.5% (274/287)  IGHV1-69*01  186  ...........G..............................................G.G.............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        V  Y  Y  C  A  I  R  E  T  G  V  G  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_9710   271  CGTATATTACTGTGCGATCCGGGAAACTGGGGTAGGAGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  347
V  95.5% (274/287)  IGHV1-69*01  276  ...G.............------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                              
D  100.0% (8/8)     IGHD7-27*01  3    ------------------------........---------------------------------------------  10
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------...........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_349527

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           367     6e-104
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9711   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9711   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.2% (242/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_9711   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  97.2% (242/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_9711   271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_349524

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            330     1e-92
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTTTGG	CTATGATAGTCGTGGCTTTTAC	AGACGTTCTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTTTGGCTATGATAGTCGTGGCTTTTACAGACGTTCTAACTACTTTGACTTC	ARGFGYDSRGFYRRSNYFDF	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9712   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCACTACTAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.1% (228/245)  IGHV4-4*01   49   ..................G..........T..........GC.G......C.......................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  Q  Y  N  P  P  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_9712   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCCAGTACAACCCGCCACTCAAGAGTCGAGTCACGATATCAGTAGACAAGTCCAAA  180
V  93.1% (228/245)  IGHV4-4*01   139  ....................................A.C.........T.C.................C....................G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------------CDR3
                                       N  Q  I  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  F  G  Y  D  S  R  G 
                    Query_9712   181  AACCAGATCTCCCTGAGGTTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGGCTTTGGCTATGATAGTCGTGGC  270
V  93.1% (228/245)  IGHV4-4*01   229  ......T.........A.C....C...............................G.........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  86.4% (19/22)    IGHD3-22*01  7    --------------------------------------------------------------------------..........A....T  22

                                      -IMGT------------------------>                                  
                                       F  Y  R  R  S  N  Y  F  D  F  W  G  R  G  T  L  V  A  V  S  S  
                    Query_9712   271  TTTTACAGACGTTCTAACTACTTTGACTTCTGGGGCCGGGGAACCCTGGTCGCTGTCTCCTCAG  334
D  86.4% (19/22)    IGHD3-22*01  23   .A....----------------------------------------------------------  28
J  91.7% (44/48)    IGHJ4*02     1    ----------------............A........A.............A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_349525

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           272     2e-75
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CGTACTGG	ATTACGATGTTTTGAGTGGTTAT	CC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCGTACTGGATTACGATGTTTTGAGTGGTTATCCCTACTTTGACTAC	AVLDYDVLSGYPYFDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	97	17	0	85.1
CDR3-IMGT (germline)	246	247	2	2	0	0	100
Total	N/A	N/A	244	209	35	0	85.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  D  S  I  T  S  R  T  Y  Y  W  A  W  I  R  Q  P  P  G  K  G  
                    Query_9713   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCACCAGCAGAACTTACTACTGGGCCTGGATCCGCCAGCCCCCCGGGAAGGGCC  93
V  85.7% (209/244)  IGHV4-39*01  50   .....TCC...A..................G........G...T..T.G...........G..................A........G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  F  G  S  I  Y  S  G  G  P  T  Y  Y  T  P  S  L  G  S  P  I  P  V  S  I  A  T  S  
                    Query_9713   94   TGGAGTGGTTTGGGAGTATCTATTCTGGGGGGCCCACCTACTACACCCCGTCCCTCGGGAGTCCCATCCCCGTTTCCATAGCCACGTCGG  183
V  85.7% (209/244)  IGHV4-39*01  140  ........A...............A.A.T...AG...........A..........AA.....GAG..A..A.A...G...A......CA  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      G  N  L  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  V  L  D  Y  D  V  L  S  
                    Query_9713   184  GGAACCTGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGCCGTACTGGATTACGATGTTTTGAGTG  273
V  85.7% (209/244)  IGHV4-39*01  230  A.....A.................G...........................G...........--------------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  91.3% (21/23)    IGHD3-3*01   3    ------------------------------------------------------------------------........T...G.....  20

                                      T------------------>                                  
                                      G  Y  P  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9713   274  GTTATCCCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  91.3% (21/23)    IGHD3-3*01   21   .....-------------------------------------------------  25
J  100.0% (47/47)   IGHJ4*02     2    -------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_143080

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           12.2    33   
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GCCGCGAAAATCGGTCTTTGGACTACTTATCCC	TGGGGG	GGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCCGCGAAAATCGGTCTTTGGACTACTTATCCCTGGGGGGGGCGACTGGTTCGACCCC	ARGPRKSVFGLLIPGGGDWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  D  Y  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9714   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCGATTACTATTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (233/245)  IGHV4-34*01  49   .......................................AG.GGT..C..........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  G  A  T  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9714   91   TGGATTGGGGAAATCAATCATGGTGCAACGACCAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  .....................A...G..GC............C...............................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  K  S  V  F  G  L 
                    Query_9714   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGCCGCGAAAATCGGTCTTTGGACTA  270
V  95.1% (233/245)  IGHV4-34*01  229  ....................C............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      -IMGT--------------------------->                                  
                                       L  I  P  G  G  G  D  W  F  D  P  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_9714   271  CTTATCCCTGGGGGGGGCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  337
D  100.0% (6/6)     IGHD3-16*01  17   --------......-----------------------------------------------------  22
J  97.9% (47/48)    IGHJ5*02     4    -------------------................................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_349529

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           360     1e-101
IGHD6-19*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCA	AGTGGCTGG	CAAAGAGACTTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAAGTGGCTGGCAAAGAGACTTTCTTTGACTAC	REIKWLAKRLSLTT	242	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	29	28	0	1	96.6
CDR1-IMGT	29	52	24	24	0	0	100
FR2-IMGT	53	103	51	49	2	0	96.1
CDR2-IMGT	104	127	24	20	4	0	83.3
FR3-IMGT	128	241	114	113	1	0	99.1
CDR3-IMGT (germline)	242	249	8	8	0	0	100
Total	N/A	N/A	250	242	7	1	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L   D  S  P  V  Q  P  L  D  S  P  S  V  A  I  A  W  T  G  S  A  R  L  Q  G  R  G  W 
                    Query_9715   1    GGTCCCT-AGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  89
V  96.8% (242/250)  IGHV3-21*01  47   .......G................................................A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       S  G  S  Q  P  L  V  V  I  V  L  T  Y  T  T  Q  T  Q  *  R  A  D  S  P  S  P  E  T  T  P 
                    Query_9715   90   AGTGGGTCTCAGCCATTAGTAGTGATAGTGCTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  179
V  96.8% (242/250)  IGHV3-21*01  137  ...........T...........AG....AG...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                       R  T  H  C  I  C  K  *  T  A  *  E  P  R  T  R  L  C  I  S  V  R  E  I  K  W  L  A  K  R 
                    Query_9715   180  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGCGAGAGATCAAGTGGCTGGCAAAGAGA  269
V  96.8% (242/250)  IGHV3-21*01  227  .........................................................A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-19*01  10   -------------------------------------------------------------------------.........--------  18

                                      ------------->                                  
                                       L  S  L  T  T  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_9715   270  CTTTCTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCATCTCCTCAG  317
J  95.5% (42/44)    IGHJ4*02     5    ----......................A...........G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_3099

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           452     3e-129
IGHD3-10*01                                                                                           12.2    37    
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTCAATT	TGGTTC	CGCAAATGG	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTCAATTTGGTTCCGCAAATGGCTACCAGTACGGCATGGACGTC	ARFQFGSANGYQYGMDV	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	73	1	0	98.6
CDR1-IMGT	76	99	24	24	0	0	100
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	113	1	0	99.1
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	291	2	0	99.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_9716   2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  91
V  99.3% (291/293)  IGHV5-51*03  2    ..G.......................................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_9716   92   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  181
V  99.3% (291/293)  IGHV5-51*03  92   ..........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_9716   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  99.3% (291/293)  IGHV5-51*03  182  ................................................G.........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  M  Y  Y  C  A  R  F  Q  F  G  S  A  N  G  Y  Q  Y  G  M  D  V  W  G  Q  G  T  T  V  
                    Query_9716   272  CCGCCATGTATTACTGTGCGAGATTTCAATTTGGTTCCGCAAATGGCTACCAGTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCA  361
V  99.3% (291/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD3-10*01  10   -------------------------------......-----------------------------------------------------  15
J  94.5% (52/55)    IGHJ6*02     8    ----------------------------------------------....T.C.....T...............................  51

                                                 
                                      T  V  S  S 
                    Query_9716   362  CCGTCTCCTCA  372
J  94.5% (52/55)    IGHJ6*02     52   ...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_334700

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           299     2e-83
IGHD3-10*01                                                                                           10.3    119  
IGHJ3*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGG	CGGGG	GCTCGGCCGGGGCC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGCGGGGGCTCGGCCGGGGCCTTTGATATC	AREGGGSAGAFDI	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	221	30	0	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  G  Y  Y  F  R  S  W  V  R  Q  H  P  G  K  G 
                    Query_9717   1    ACCCTGTCCCTCACCTGCACTGTCTCAGGTGACTCCATCAGCAGTGGTTATTACTTTCGGAGTTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  88.0% (221/251)  IGHV4-31*03  49   ..........................T....G................GG.....ACT....C...A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  Y  M  H  H  R  G  S  S  F  Y  S  A  S  L  K  S  R  I  A  M  S  V  D  T  S 
                    Query_9717   91   CTGGGGTGGATTGGGTACATGCATCACAGGGGAAGCAGCTTCTACAGCGCGTCCCTCAAGAGTCGAATTGCCATGTCAGTGGACACCTCT  180
V  88.0% (221/251)  IGHV4-31*03  139  ....A...............CT..T....T..G....C..A.....A.C.................G..A....A.....A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  T  G  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  G  S  A  G 
                    Query_9717   181  AAGAACCAGTTCTCCCTGAAGCTGACTGGTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGAGAGAGGGCGGGGGCTCGGCCGGG  270
V  88.0% (221/251)  IGHV4-31*03  229  .........................GCTC......T.................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  15   --------------------------------------------------------------------------.....-----------  19

                                      ----------->                                  
                                       A  F  D  I  W  G  Q  G  T  M  F  T  V  S  S  
                    Query_9717   271  GCCTTTGATATCTGGGGCCAAGGGACAATGTTCACCGTCTCTTCAG  316
J  97.7% (42/43)    IGHJ3*02     8    ---...........................G...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_26043

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD6-6*01                                                                                            19.9    0.18  
IGHJ5*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CGGA	AGTATAGGTGCTCGTC	T	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACGGAAGTATAGGTGCTCGTCTCAACTGGTTCGACCCC	ARHGSIGARLNWFDP	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	112	2	0	98.2
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	285	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  P  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  
                    Query_9718   3    AGGTGCAGCCGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACAGCTTTAGCA  92
V  96.6% (285/295)  IGHV5-51*01  2    .........T............................................................T................C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  L  I  F  P  A  D  A  D  T  R  Y  
                    Query_9718   93   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAGGGCCTGGAGTGGATGGGGCTCATCTTTCCTGCTGACGCTGATACCAGATACA  182
V  96.6% (285/295)  IGHV5-51*01  92   .....................................A..................A......A.....G....T...............  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_9718   183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  96.6% (285/295)  IGHV5-51*01  182  ................................................G.........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      S  A  M  Y  Y  C  A  R  H  G  S  I  G  A  R  L  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  
                    Query_9718   273  GCGCCATGTATTACTGTGCGAGACACGGAAGTATAGGTGCTCGTCTCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCT  362
V  96.6% (285/295)  IGHV5-51*01  272  C........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  87.5% (14/16)    IGHD6-6*01   2    -----------------------------.......CA.......---------------------------------------------  17
J  100.0% (49/49)   IGHJ5*02     2    ----------------------------------------------............................................  45

                                           
                                      S  S 
                    Query_9718   363  CCTCA  367
J  100.0% (49/49)   IGHJ5*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_201829

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           438     5e-125
IGHJ3*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ACCCTCGG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTCGGTGCTCTTGATATC	ARTLGALDI	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	284	4	0	98.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_9719   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTAT  91
V  98.6% (284/288)  IGHV1-18*01  7    ..........................................................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_9719   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAATTATGCACAG  181
V  98.6% (284/288)  IGHV1-18*01  97   ...................................G.........................C..................C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_9719   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  98.6% (284/288)  IGHV1-18*01  187  ...C......................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------CDR3-IMGT-------->                                  
                                       V  Y  Y  C  A  R  T  L  G  A  L  D  I  W  G  Q  G  A  M  V  P  V  S  S  
                    Query_9719   272  GTGTATTACTGTGCGAGAACCCTCGGTGCTCTTGATATCTGGGGCCAAGGGGCAATGGTCCCCGTCTCTTCAG  344
V  98.6% (284/288)  IGHV1-18*01  277  ..................-------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                        
J  93.6% (44/47)    IGHJ3*02     4    --------------------------....T....................A........A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_201825

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           16.1    2.5  
IGHJ3*01                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGATCCCTT	CTATGATA	CTACAGGAAGTTATTCCTTTGACCTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACATATGGATCCCTTCTATGATACTACAGGAAGTTATTCCTTTGACCTT	VRHMDPFYDTTGSYSFDL	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	93	21	0	81.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	252	39	0	86.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  V  S  G  Y  R  F  T  S  K
                    Query_9720   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGAGTCTCTGGATACAGGTTTACCAGCAA  90
V  86.6% (252/291)  IGHV5-51*01  6    ....................................C.........................AG.GT...........C.........T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  H  M  P  G  Q  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_9720   91   ATGGATCGCCTGGGTGCGCCACATGCCCGGACAGGGCCTGGAGTGGATGGGCGTCATCTATCCCGGAGACTCTGATACCAGATACAACCC  180
V  86.6% (252/291)  IGHV5-51*01  96   C.......G............G........GA.A.................GA..........T..T...................G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  R  I  S  I  S  A  D  E  S  T  N  T  A  S  L  H  W  G  F  L  R  A  S  D  T  A
                    Query_9720   181  GTCCTTCCAAGGCCGGATCAGCATTTCAGCCGACGAGTCCACCAACACTGCCTCTCTGCACTGGGGCTTCCTGCGGGCCTCGGACACTGC  270
V  86.6% (252/291)  IGHV5-51*01  186  ..............A.G...C...C.........A......T..G...C....AC.....G...A..AG....AA............C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        I  Y  Y  C  V  R  H  M  D  P  F  Y  D  T  T  G  S  Y  S  F  D  L  W  G  Q  G  T  M  V  T
                    Query_9720   271  CATATACTATTGTGTGAGACATATGGATCCCTTCTATGATACTACAGGAAGTTATTCCTTTGACCTTTGGGGCCAAGGGACAATGGTCAC  360
V  86.6% (252/291)  IGHV5-51*01  276  ...G..T..C....C......---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-22*01  7    ---------------------------------........-------------------------------------------------  14
J  97.1% (33/34)    IGHJ3*01     17   -------------------------------------------------------------------.......................  39

                                                 
                                        V  S  S  
                    Query_9720   361  CGTCTCCTCAG  371
J  97.1% (33/34)    IGHJ3*01     40   ......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_201827

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           347     7e-98
IGHD1-26*01                                                                                           10.3    117  
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TAGTG	CGTCCGCTCGAGTTTTA	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATAGTGCGTCCGCTCGAGTTTTAGACGTC	ARDSASARVLDV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  D  A  S  G  F  T  F  S  S  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9721   1    GGTCCCTGAGACTCTCCTGTGACGCCTCTGGATTCACCTTTAGTAGCCACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-74*01  47   .....................CA.................C......T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  S  T  D  G  S  R  T  T  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  T  
                    Query_9721   91   TGTGGGTCTCACGTATTAGTACTGATGGGAGTCGCACAACCTACGTGGACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  94.4% (236/250)  IGHV3-74*01  137  ..................A..G..........A......G.....C..........A.............................G...  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  A  S  A  R  V  
                    Query_9721   181  AGAACACACTGTATCTGCAATTGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGAGATAGTGCGTCCGCTCGAGTTT  270
V  94.4% (236/250)  IGHV3-74*01  227  .......G............A...............................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  5    ----------------------------------------------------------------------.....---------------  9

                                      ------->                                 
                                      L  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_9721   271  TAGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  311
J  97.4% (38/39)    IGHJ6*02     24   --............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_201821

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           327     9e-92
IGHD2-2*01                                                                                            23.8    0.011
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TATT	TAGTACCAGCTG	GAACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTATTTAGTACCAGCTGGAACGACTACGGTTTGGACGTC	ARVFSTSWNDYGLDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  T  D  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9722   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCCTTCACTGATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-48*03  47   ...................................A......G.AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  R  G  G  H  S  T  H  Y  A  T  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_9722   91   AGTGGGTTTCATACATTAGTCGCGGTGGTCATTCCACACACTACGCGACCTCTGTTAAGGGCCGATTCACCATCTCCAGAGACAGCGCCA  180
V  92.0% (229/249)  IGHV3-48*03  137  ....................A.TA.....AG.A...T.T.......AGA......G............................A.....  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  R  V  F  S  T  S  W  N  
                    Query_9722   181  AGAACTCACTCTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTCTTTATTACTGTGCGAGAGTATTTAGTACCAGCTGGAACG  270
V  92.0% (229/249)  IGHV3-48*03  227  ..........G.........................C.............G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD2-2*01   13   -------------------------------------------------------------------------............-----  24

                                      ---------------->                                 
                                      D  Y  G  L  D  V  W  G  L  G  T  T  V  T  V  S  S 
                    Query_9722   271  ACTACGGTTTGGACGTCTGGGGCCTAGGAACCACGGTCACCGTCTCCTCA  320
J  94.0% (47/50)    IGHJ6*02     13   ........A...............A...G.....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_201822

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            353     9e-100
IGHD3-10*01                                                                                           10.3    121   
IGHJ6*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TATATATCCTCTCTACCG	CGGGG	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATATATATATCCTCTCTACCGCGGGGGGTATGGACCTT	AKDIYILSTAGGMDL	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	252	10	10	0	0	100
Total	N/A	N/A	252	239	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  K  A  S  G  F  T  F  N  D  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9723   1    GGTCCCTGAGACTCTCCTGTAAAGCCTCTGGATTCACCTTTAATGATTATGCCATACACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  94.8% (239/252)  IGHV3-9*01   47   ....................GC...................G.............G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  T  W  N  S  G  S  M  G  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_9723   91   AGTGGGTCTCAGGTATTACTTGGAATAGTGGTAGTATGGGGTATGCGGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  94.8% (239/252)  IGHV3-9*01   137  ..................G...............C..A..C..............................A..................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  G  V  E  D  T  A  L  Y  Y  C  A  K  D  I  Y  I  L  S  T  
                    Query_9723   181  AGAACTCCCTGTATCTCCAAATGAACAGTCTGGGAGTTGAGGACACGGCCTTATATTACTGTGCAAAAGATATATATATCCTCTCTACCG  270
V  94.8% (239/252)  IGHV3-9*01   227  ................G...............A...C...............G...................------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                      ---------------->                                 
                                      A  G  G  M  D  L  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_9723   271  CGGGGGGTATGGACCTTTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  320
D  100.0% (5/5)     IGHD3-10*01  15   .....---------------------------------------------  19
J  93.3% (42/45)    IGHJ6*02     18   -----.........G.C......................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_323122

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            310     1e-86
IGHD2-21*01                                                                                           12.2    31   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	TGGTGA	AGTATTCCTTGGATCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGGTGAAGTATTCCTTGGATCCCTTTGACCAC	ARLVKYSLDPFDH	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  N  D  H  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9724   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATTACCAATGATCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.2% (222/246)  IGHV4-4*02   49   ..................GC...........G......C.G..G.AG.A.........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  R  S  G  S  T  T  Y  N  P  S  L  Q  S  R  V  A  F  S  V  D  K  S  K 
                    Query_9724   91   GAGTGGATTGGAGAAATCTATCGTAGTGGGAGCACCACTTACAACCCGTCCCTTCAGAGTCGAGTCGCCTTCTCAGTAGACAAGTCCAAG  180
V  90.2% (222/246)  IGHV4-4*02   139  ...........G..........A..............AC..............CA...........A..A.A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  F  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  V  K  Y  S  L  D  P 
                    Query_9724   181  AACCAGTTCTCCCTGAGTCTGAGATCTGTGACCGCCGCCGATACGGCCGTATATTACTGTGCGAGATTGGTGAAGTATTCCTTGGATCCC  270
V  90.2% (222/246)  IGHV4-4*02   229  ................AG.....C..............G..C........G...............------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-21*01  13   -------------------------------------------------------------------......-----------------  18
J  93.2% (41/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  H  W  G  Q  G  P  L  V  T  V  S  P  
                    Query_9724   271  TTTGACCACTGGGGCCAGGGACCCCTGGTCACCGTCTCCCCAG  313
J  93.2% (41/44)    IGHJ4*02     6    ......T..............A.................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_53588

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           364     5e-103
IGHD2-15*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGC	ATTGTAATGGT	AACAGGTGTTGGGG	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGCATTGTAATGGTAACAGGTGTTGGGGCGTC	ARDRHCNGNRCWGV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9725   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAACAACTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (240/247)  IGHV3-53*01  47   .............................................G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  I  Y  S  G  G  T  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  
                    Query_9725   91   AGTGGGTCTCACTTATTTATAGCGGTGGTACCACACACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGA  180
V  97.2% (240/247)  IGHV3-53*01  137  ...........G..................G....T...................................................A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  R  H  C  N  G  N  R  
                    Query_9725   181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGATAGGCATTGTAATGGTAACAGGT  270
V  97.2% (240/247)  IGHV3-53*01  227  .................................C.................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  90.9% (10/11)    IGHD2-15*01  6    ------------------------------------------------------------------------......G....-------  16

                                      ---------->                                 
                                      C  W  G  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9725   271  GTTGGGGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (37/37)   IGHJ6*02     26   -------.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_147797

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_9726   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_9726   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_9726   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_9726   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_53583

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD3-16*02                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTATCG	ACATTGGTTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTATTTGACTAT	ARHYRHWLFDY	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	238	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  L  T  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9727   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCCTCACCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (238/251)  IGHV4-39*01  49   ...............................G....A...G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9727   91   CTGGAGTGGATTGGGAGTTTGTATTATAGTGGCAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  94.8% (238/251)  IGHV4-39*01  139  ..................A.C...........G...............................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  H  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  H  W  L  F 
                    Query_9727   181  AAGAACCACTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACATTATCGACATTGGTTATTT  270
V  94.8% (238/251)  IGHV4-39*01  229  ........G..C........G....G...T.......................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-16*02  25   -----------------------------------------------------------------------......-------------  30
J  97.7% (42/43)    IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9727   271  GACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  97.7% (42/43)    IGHJ4*02     9    .....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_53581

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           433     1e-123
IGHD3-22*01                                                                                           23.8    0.012 
IGHJ3*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGCCA	A	TATGATAGTAGT	ACTTATAAGGGGGGGTTC	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCAATATGATAGTAGTACTTATAAGGGGGGGTTCGCTTTTGATATC	ASQYDSSTYKGGFAFDI	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	284	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  F  T  T  Y
                    Query_9728   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGGTTTACCACCTA  90
V  97.6% (284/291)  IGHV5-51*01  6    ..............................................................................C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  S  P
                    Query_9728   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACAGCCC  180
V  97.6% (284/291)  IGHV5-51*01  96   ........G........................................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  L  W  S  S  L  K  A  S  D  P  A
                    Query_9728   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCTGTGGAGCAGCCTGAAGGCCTCGGACCCCGC  270
V  97.6% (284/291)  IGHV5-51*01  186  ...........................................................A.........................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  S  Q  Y  D  S  S  T  Y  K  G  G  F  A  F  D  I  W  G  Q  G  T  M  V  T  V
                    Query_9728   271  CATGTATTACTGTGCGAGCCAATATGATAGTAGTACTTATAAGGGGGGGTTCGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGT  360
V  97.6% (284/291)  IGHV5-51*01  276  ..................A..---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD3-22*01  8    ----------------------............--------------------------------------------------------  19
J  100.0% (46/46)   IGHJ3*02     5    ----------------------------------------------------......................................  42

                                              
                                        S  S  
                    Query_9728   361  CTCTTCAG  368
J  100.0% (46/46)   IGHJ3*02     43   ........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_53580

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            339     2e-95
IGHD2-8*02                                                                                            14.1    8.8  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGTAGGCAGGAGCGTT	CTGGTGG	GAACTTCGCGAAGGGCATGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGTAGGCAGGAGCGTTCTGGTGGGAACTTCGCGAAGGGCATGGTACTTTGACAAC	ARGVGRSVLVGTSRRAWYFDN	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                     <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                        S  L  R  L  S  C  A  V  S  G  G  S  I  T  N  H  N  W  W  S  W  V  R  Q  S  P  G  K  G  
                    Query_9729  1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCACCAATCATAACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGC  90
V  93.6% (233/249)  IGHV4-4*02  47   ..A.....TCC...A...........................G..G.AG.........................C...............  136
                                        T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                     ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                     L  E  W  I  G  E  I  Y  H  S  G  S  S  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  K  S  
                    Query_9729  91   TGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCAGCAACTACAACCCGTCCCTCAAGAGTCGACTCACAATATCAGTGGACAAGTCCA  180
V  93.6% (233/249)  IGHV4-4*02  137  ....................................C............................G....C........A..........  226
                                     L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                     -FR3-IMGT----------------------------------------------------><--------------------------C
                                     K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  R  S  V  L  
                    Query_9729  181  AGAACCAGTTCTCCCTGAAACTGAGCTCCGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGAGTAGGCAGGAGCGTTCTGG  270
V  93.6% (233/249)  IGHV4-4*02  227  ...................G........T........................................---------------------  295
                                     K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-8*02  12   --------------------------------------------------------------------------------------....  15

                                     DR3-IMGT-------------------------->                                  
                                     V  G  T  S  R  R  A  W  Y  F  D  N  W  G  Q  G  A  Q  V  I  V  S  S  
                    Query_9729  271  TGGGAACTTCGCGAAGGGCATGGTACTTTGACAACTGGGGCCAGGGAGCCCAGGTCATCGTCTCCTCAG  339
D  100.0% (7/7)     IGHD2-8*02  16   ...------------------------------------------------------------------  18
J  91.3% (42/46)    IGHJ4*02    3    -----------------------.........T..............A...T.....C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_53587

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           324     8e-91
IGHD4-4*01                                                                                            18.0    0.59 
IGHJ5*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-4*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGGCA	TGACTACAG	AAAAGGGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGGCATGACTACAGAAAAGGGGACTGGTTCGACTCC	ARGGHDYRKGDWFDS	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	104	10	0	91.2
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  G  W  I  R  Q  H  P  G  K  S  
                    Query_9730   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGGGCTGGATCCGCCAGCACCCAGGGAAGAGCC  93
V  91.6% (228/249)  IGHV4-31*03  50   .....TCC...A...............................................A..........................G...  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  F  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  M  S  R  V  S  L  S  V  D  T  S  
                    Query_9730   94   TGGAGTGGATTGGCTTCATCTACTATAGTGGGACCACCTACTACAACCCGTCCCTCATGAGTCGAGTTAGTTTATCAGTGGACACGTCTA  183
V  91.6% (228/249)  IGHV4-31*03  140  .............G.A......T..C.......G.......................A...........CCA.......A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  H  D  Y  R  K  
                    Query_9730   184  AGAACCAGTTCTCCCTGAGGCTGACCTCCGTGACTGCCGCGGACACGGCCGTTTATTATTGTGCGAGAGGAGGGCATGACTACAGAAAAG  273
V  91.6% (228/249)  IGHV4-31*03  230  ..................A.....G...T.......................G.....C..........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD4-4*01   1    ----------------------------------------------------------------------------.........-----  9

                                      ---------------->                                  
                                      G  D  W  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9730   274  GGGACTGGTTCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  324
J  95.8% (46/48)    IGHJ5*01     4    ---......................A....................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_53586

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           294     6e-82
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACG	TACGGTGAC	CCTACACTCCCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACGTACGGTGACCCTACACTCCCATACTTTGACTCT	ARTYGDPTLPYFDS	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  M  S  S  G  G  Y  L  W  S  W  I  R  Q  N  P  G  K  G 
                    Query_9731   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCTATGAGCAGTGGCGGCTATCTCTGGAGCTGGATCCGCCAAAACCCAGGGAAGGGC  90
V  87.9% (218/248)  IGHV4-31*03  49   ...............................G...C..C........T..T..CTA..................GC..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  T  S  Y  Y  S  P  S  L  K  R  R  L  T  I  S  V  G  T  S 
                    Query_9731   91   CTGGAGTGGATTGGGAGCATCTATTACAGTGGAACCTCCTACTACAGCCCGTCCCTCAAGAGGCGACTTACAATATCAGTAGGCACTTCT  180
V  87.9% (218/248)  IGHV4-31*03  139  ...............TA...............G.G.A.........A...............T...G....C..........A...G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       E  K  H  F  S  L  K  L  T  S  M  T  A  A  D  T  A  I  Y  F  C  A  R  T  Y  G  D  P  T  L 
                    Query_9731   181  GAGAAGCACTTCTCCCTGAAGCTGACCTCTATGACTGCCGCGGACACGGCCATATATTTTTGTGCGAGGACGTACGGTGACCCTACACTC  270
V  87.9% (218/248)  IGHV4-31*03  229  A....C..G................G....G....................G.G....AC........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (9/9)     IGHD4-17*01  5    ------------------------------------------------------------------------.........---------  13

                                      -------------->                                  
                                       P  Y  F  D  S  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_9731   271  CCATACTTTGACTCTTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  319
J  93.5% (43/46)    IGHJ4*02     3    ---..........AC.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_297993

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           315     5e-88
IGHD6-13*01                                                                                           18.0    0.62 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTGGT	CAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTGGTCAGCAGCTGACTGACTAC	ARDSGQQLTDY	276	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	275	147	111	3	33	75.5
CDR3-IMGT (germline)	276	283	8	8	0	0	100
Total	N/A	N/A	283	244	6	33	86.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_9732   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  86.2% (244/283)  IGHV3-21*01  47   ..............................................C..................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  H  I  Y  Y  G  D  S  V  K  G  R  F  T  Y  Y  A  D  S  V  
                    Query_9732   91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAGTCACATATATTATGGAGACTCAGTGAAGGGCCGATTCACCTATTACGCAGACTCAGTGA  180
V  86.2% (244/283)  IGHV3-21*01  137  ................................T.....---------------------------------..C................  193
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I                                   Y  Y  A  D  S  V  

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                      K  G  R  F  T  I  S  R  D  D  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  
                    Query_9732   181  AGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATT  270
V  86.2% (244/283)  IGHV3-21*01  194  ..........................A..........................................................G....  283
                                      K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-----------CDR3-IMGT----------->                                  
                                      Y  C  A  R  D  S  G  Q  Q  L  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9732   271  ACTGTGCGAGAGATTCTGGTCAGCAGCTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
V  86.2% (244/283)  IGHV3-21*01  284  .............-----------------------------------------------------------  296
                                      Y  C  A  R                                                              
D  100.0% (9/9)     IGHD6-13*01  9    --------------------.........-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_53584

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           54.5    6e-12 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GGCGCAAC	GTATTACTATGATAGTAGTGGTTATTAC	GGGCTCCTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGGCGCAACGTATTACTATGATAGTAGTGGTTATTACGGGCTCCTATGACTAC	AKEAQRITMIVVVITGSYDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9733   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-23*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  G  N  T  Y  Y  P  D  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_9733   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAACACATACTACCCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAGTTCCA  180
V  98.4% (246/250)  IGHV3-23*01  137  .................................G..........G.......................................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  E  A  Q  R  I  T  M  
                    Query_9733   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATATTACTGTGCGAAAGAGGCGCAACGTATTACTATGA  270
V  98.4% (246/250)  IGHV3-23*01  227  ..................................................G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (28/28)   IGHD3-22*01  1    ------------------------------------------------------------------------------............  12

                                      R3-IMGT------------------------>                                  
                                      I  V  V  V  I  T  G  S  Y  D  Y  L  G  Q  G  T  L  V  T  V  S  S  
                    Query_9733   271  TAGTAGTGGTTATTACGGGCTCCTATGACTACTTGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  100.0% (28/28)   IGHD3-22*01  13   ................--------------------------------------------------  28
J  97.6% (40/41)    IGHJ4*02     8    -------------------------........G................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_290567

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           330     1e-92
IGHD2-15*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CCTCTGGTT	TTGTAGTGGTGCTAACTGCTACTC	GGACG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCCTCTGGTTTTGTAGTGGTGCTAACTGCTACTCGGACGACTTTGACTAC	ALWFCSGANCYSDDFDY	239	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	25	10	9	1	0	90
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	20	4	0	83.3
FR3-IMGT	125	238	114	114	0	0	100
CDR3-IMGT (germline)	239	240	2	2	0	0	100
Total	N/A	N/A	225	218	7	0	96.9


Alignments

                                      <FR1-IMGT><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><----
                                        G  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  S  S
                    Query_9734   16   TGGAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATACAGTAG  105
V  96.9% (218/225)  IGHV3-21*01  66   ..C........................C.......................................................C..T...  155
                                        A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S

                                      ---CDR2-IMGT------><----------------------------------------------------FR3-IMGT----------
                                        S  S  S  R  S  V  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q
                    Query_9734   106  TAGTAGTAGTCGTTCCGTATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCA  195
V  96.9% (218/225)  IGHV3-21*01  156  ..........A...A.A.........................................................................  245
                                        S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q

                                      ------------------------------------------><--------------------CDR3-IMGT-----------------
                                        M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  L  W  F  C  S  G  A  N  C  Y  S  D  D  F  D
                    Query_9734   196  AATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCCCTCTGGTTTTGTAGTGGTGCTAACTGCTACTCGGACGACTTTGA  285
V  96.9% (218/225)  IGHV3-21*01  246  .............................................---------------------------------------------  290
                                        M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                             
D  91.7% (22/24)    IGHD2-15*01  7    ------------------------------------------------------...........G..G.........------------  30
J  97.8% (44/45)    IGHJ4*02     4    -----------------------------------------------------------------------------------.......  10

                                      --->                                  
                                        Y  W  D  Q  G  T  L  V  T  V  S  S  
                    Query_9734   286  CTACTGGGACCAGGGAACCCTGGTCACCGTCTCCTCAG  323
J  97.8% (44/45)    IGHJ4*02     11   ........G.............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_243404

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           339     2e-95
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CATGCTCTCCTCGACTGATATGT	CGTTCGGGGGA	TTTTTGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACATGCTCTCCTCGACTGATATGTCGTTCGGGGGATTTTTGATTGACCAG	ARDMLSSTDMSFGGFLIDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	234	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  S  S  R  S  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_9735   1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGACTCCATCAGCAGTAGAAGTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGG  90
V  93.2% (234/251)  IGHV4-39*02  49   ...................C...........G...............T...........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  E  S  R  V  A  I  S  M  D  T  S 
                    Query_9735   91   CTGGAATGGATTGGGAATATCTATTATAGTGGGAGCACCGACTACAACCCGTCCCTCGAGAGTCGAGTCGCCATATCGATGGACACGTCC  180
V  93.2% (234/251)  IGHV4-39*02  139  .....G..........G......................T.................A...........A.......CG.A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  M  L  S  S  T  D 
                    Query_9735   181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACCGCCGCAGACACGGCTATTTATTACTGTGCGAGAGACATGCTCTCCTCGACTGAT  270
V  93.2% (234/251)  IGHV4-39*02  229  ........C............C....C........................G.G.................-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       M  S  F  G  G  F  L  I  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9735   271  ATGTCGTTCGGGGGATTTTTGATTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  90.9% (10/11)    IGHD3-16*01  13   ----....T......-------------------------------------------------  23
J  95.2% (40/42)    IGHJ4*02     7    ----------------------.....T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_243405

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         346     2e-97
IGHD4-17*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCCCAA	TACGCTGACTAC	GAAGACAACCTGGCTTTG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCCAATACGCTGACTACGAAGACAACCTGGCTTTGTACGGTATGGACGTC	ARDSQYADYEDNLALYGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	56	27	27	0	0	100
FR2-IMGT	57	107	51	51	0	0	100
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  R  L  S  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  
                    Query_9736     4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTTACTCCATCAGCAGTGGTTACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTGG  93
V  94.7% (234/247)  IGHV4-38-2*02  50   .....TCC...A....CA........................................................................  139
                                           L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  G  S  I  Y  H  S  G  S  T  H  Y  T  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  
                    Query_9736     94   AGTGGATTGGGAGTATCTATCATAGTGGGAGCACACACTACACCCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGA  183
V  94.7% (234/247)  IGHV4-38-2*02  140  ..................................CT......A...............................................  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><-------------------------CDR3-
                                        N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  Q  Y  A  D  Y  E  
                    Query_9736     184  ACCAGTTCTCCCTGAACCTGAATTCTGTGACCGCTGCAGACACGGCCGTGTATTACTGTGCGAGAGATTCCCAATACGCTGACTACGAAG  273
V  94.7% (234/247)  IGHV4-38-2*02  230  ................G....GC...........C................................-----------------------  296
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                          
D  91.7% (11/12)    IGHD4-17*01    5    --------------------------------------------------------------------------....G.......----  16

                                        IMGT------------------------>                                 
                                        D  N  L  A  L  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9736     274  ACAACCTGGCTTTGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
J  100.0% (48/48)   IGHJ6*02       15   --------------................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_243406

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           283     1e-78
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCAGC	ATACATCTCTGGT	CACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAGCATACATCTCTGGTCACCCCTAC	SAYISGHPY	240	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	102	12	0	89.5
Total	N/A	N/A	239	210	29	0	87.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  V  S  V  H  Y  M  S  W  V  R  Q  A  P  G  R  G  L  
                    Query_9737   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCGTCAGTGTACATTACATGAGCTGGGTCCGCCAGGCTCCAGGGAGGGGACTGG  90
V  87.9% (210/239)  IGHV3-53*01  47   ...............................G...A........AGCA.C...............................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  L  T  S  G  K  T  Y  Y  T  D  S  A  M  G  R  F  T  I  S  R  D  S  S  K  
                    Query_9737   91   AGTGGGTCTCAGCGATTCTTACCAGTGGTAAGACATACTACACAGACTCCGCGATGGGCCGATTCACCATCTCCAGAGACTCTTCCAAGA  180
V  87.9% (210/239)  IGHV3-53*01  137  ............TT...TA..G.G......GC.........G.........T..A.........................AA........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->    
                                      N  T  V  N  L  Q  M  N  S  L  S  A  G  D  T  A  F  Y  Y  C  S  A  Y  I  S  G  H  P  Y  W  
                    Query_9737   181  ACACAGTGAATCTTCAAATGAACAGCCTGAGCGCCGGGGACACGGCCTTCTATTACTGTTCAGCATACATCTCTGGTCACCCCTACTGGG  270
V  87.9% (210/239)  IGHV3-53*01  227  ....GC..T......................A....A..........G.G.........-------------------------------  285
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                                
D  84.6% (11/13)    IGHD5-18*01  5    ----------------------------------------------------------------.....G..A....-------------  17
J  97.4% (37/38)    IGHJ4*02     11   ----------------------------------------------------------------------------------........  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_9737   271  GCCAGGGGACCCTGGTCACCGTCTCCTCAG  300
J  97.4% (37/38)    IGHJ4*02     19   .......A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_337058

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            397     8e-113
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_9738  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.8% (272/290)  IGHV1-8*02  6    .............................................................................C.....C......  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_9738  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.8% (272/290)  IGHV1-8*02  96   ........A.........................................................C.......................  185
                                       D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_9738  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.8% (272/290)  IGHV1-8*02  186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                       K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                     ------------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9738  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.8% (272/290)  IGHV1-8*02  276  ...G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01  9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02    9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_243400

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           336     1e-94
IGHD3-16*01                                                                                           10.3    114  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TATGA	CGGG	GGTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATATGACGGGGGTAAGGACGTC	RDMTGVRTS	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	107	51	50	0	1	98
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	249	234	14	1	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  I  V  S  G  D  S  I  S  T  T  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9739   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGACTCCATCAGCACTACTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.0% (234/249)  IGHV4-39*01  49   ...................C...........G...........G..G...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G   V  S  I  I  L  G  T  P  T  T  T  R  P  S  R  V  E  S  P  Y  Q  *  T  R  P
                    Query_9739   91   CTGGAGTGGATTGGG-GTATCTATTATACTGGGAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  179
V  94.0% (234/249)  IGHV4-39*01  139  ...............A............G.....G..........................................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                        R  T  S  F  T  W  S  *  A  L  *  P  P  Q  T  R  L  R  I  F  V  R  D  M  T  G  V  R  T  S
                    Query_9739   180  AAGAACCAGTTTTACCTGGAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGCGTATTTTTGTACGAGATATGACGGGGGTAAGGACGTC  269
V  94.0% (234/249)  IGHV4-39*01  229  ...........C.C....A.................................T.....AC...G.....---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-16*01  5    ---------------------------------------------------------------------.....----------------  9
J  97.8% (44/45)    IGHJ6*02     18   ------------------------------------------------------------------------------....T.......  29

                                                                       
                                        G  A  K  G  P  R  S  P  S  P   
                    Query_9739   270  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  302
J  97.8% (44/45)    IGHJ6*02     30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_83169

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           318     6e-89
IGHD2-15*01                                                                                           10.3    118  
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	CCCGCGTTGC	GGTAG	A	TGATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGCCCGCGTTGCGGTAGATGATTCTTTTGATCTC	ARARVAVDDSFDL	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  S  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9740   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACTAGTCACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-74*01  47   ..........................................G...CT..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  N  D  G  S  L  T  H  Y  A  D  S  V  R  G  R  V  T  F  S  R  D  N  T  
                    Query_9740   91   TGTGGGTCTCACGTATTAATAATGATGGGAGTCTCACACACTATGCGGACTCCGTCAGGGGCCGAGTCACCTTCTCCAGAGACAACACCA  180
V  90.8% (226/249)  IGHV3-74*01  137  .....................G..........AG....AG...C...........G.A.......T.....A..............G...  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  R  T  L  Y  L  Q  M  T  S  L  R  A  D  D  T  A  V  Y  F  C  A  R  A  R  V  A  V  D  D  
                    Query_9740   181  AGAGAACACTGTATCTGCAGATGACCAGTCTGAGAGCCGACGACACGGCTGTCTATTTCTGTGCCAGAGCCCGCGTTGCGGTAGATGATT  270
V  90.8% (226/249)  IGHV3-74*01  227  ...AC..G...........A....A...............G...........G....A......A....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-15*01  17   -------------------------------------------------------------------------------.....------  21
J  92.0% (46/50)    IGHJ3*01     1    -------------------------------------------------------------------------------------....G  5

                                      ---------->                                  
                                      S  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9740   271  CTTTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCCTCAG  315
J  92.0% (46/50)    IGHJ3*01     6    ........G.................A.............T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_243402

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           396     2e-112
IGHD3-22*01                                                                                           18.0    0.66  
IGHJ4*02                                                                                              69.9    4e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCGTCG	TGATAGTTATGGTTA	CC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGCGTCGTGATAGTTATGGTTACCACTTTGACCGC	ARGRRDSYGYHFDR	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	70	5	0	93.3
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	19	5	0	79.2
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	297	7	6	1	0	85.7
Total	N/A	N/A	295	274	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  G  T  F  R 
                    Query_9741   3    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAGGGTCTCCTGCAAGGCCTCTGGAGGCACCTTCAGA  92
V  92.9% (274/295)  IGHV1-69*12  1    ...........G...........G.......................C.......A...............T.................C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  V  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  T  G  G  I  T  P  L  F  G  T  P  N  Y 
                    Query_9741   93   AGCTATGTCATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGACGGGAGGGATCACCCCTCTGTTTGGCACACCAAACTAC  182
V  92.9% (274/295)  IGHV1-69*12  91   .......CT....G......................................T...........T....A.C.....T...G........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  M  S  T  T  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_9741   183  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCTATGAGCACAACTTACATGGAGCTGAGCAGCCTGAGATCTGAGGAC  272
V  92.9% (274/295)  IGHV1-69*12  181  ............................................C.C.......G.C.................................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  G  R  R  D  S  Y  G  Y  H  F  D  R  W  G  Q  G  A  L  V  T  V  S 
                    Query_9741   273  ACGGCCGTGTATTATTGTGCGCGAGGGCGTCGTGATAGTTATGGTTACCACTTTGACCGCTGGGGCCAGGGAGCCCTGGTCACCGTCTCC  362
V  92.9% (274/295)  IGHV1-69*12  271  ..............C......A...-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  86.7% (13/15)    IGHD3-22*01  10   --------------------------------.......AG......-------------------------------------------  24
J  93.3% (42/45)    IGHJ4*02     4    -------------------------------------------------........TA.............A.................  44

                                          
                                       S  
                    Query_9741   363  TCAG  366
J  93.3% (42/45)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_243403

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           313     1e-87
IGHD3-3*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCCA	GGAGTGG	GCGGACGGACG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCAGGAGTGGGCGGACGGACGCTACTTTGACTAC	ARLQEWADGRYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  S  N  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_9742   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATCAGCAATTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.0% (222/244)  IGHV4-59*08  49   ..................A............G.........T.G................A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  S  Y  S  G  R  T  D  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_9742   91   TGGCTTGGGTATGTCTCTTATAGTGGGAGAACCGACTACAACCCCTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACACGTCGAAGAAC  180
V  91.0% (222/244)  IGHV4-59*08  139  ...A........A...A...C........C...A.................A................A..............C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  Y  L  K  L  S  S  V  I  A  E  D  T  A  L  Y  Y  C  A  R  L  Q  E  W  A  D  G  R  Y 
                    Query_9742   181  CAATTCTACCTGAAACTGAGCTCTGTGATCGCCGAAGACACGGCCCTCTATTATTGTGCGAGACTCCAGGAGTGGGCGGACGGACGCTAC  270
V  91.0% (222/244)  IGHV4-59*08  229  ..G....C......G.............C.....C..........G.G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------------------------------------------------------------....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9742   271  TTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ4*02     6    .....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_83164

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     4e-95
IGHD3-10*02                                                                                           14.1    8.2  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTGGGTGGAATTA	ACTATGT	CTAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTGGGTGGAATTAACTATGTCTACGACTAC	AKDVGGINYVYDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  A  Y  A  M  S  W  V  R  Q  A  P  G  R  G  P  
                    Query_9743   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTTAACGCCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAGGGGGCCGG  90
V  93.2% (233/250)  IGHV3-23*01  47   ...............................A..........G.AG............C......................A.....T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  T  G  G  R  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  S  D  N  S  
                    Query_9743   91   AGTGGGTCTCAACTATCAGTGGTACTGGTGGTAGAACATACTACGCAGACTCCGTGAAAGGCCGGTTCACCATCTCCAGCGACAACTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  ...........G....T.......G.........C.......................G....................A.....T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  V  G  G  I  N  Y  
                    Query_9743   181  AGAACACACTGTTTCTGCAAATGAACAGCCTCAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATGTGGGTGGAATTAACTATG  270
V  93.2% (233/250)  IGHV3-23*01  227  .......G....A..................G......................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-10*02  6    ------------------------------------------------------------------------------------......  11

                                      ---------->                                  
                                      V  Y  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_9743   271  TCTACGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  315
D  100.0% (7/7)     IGHD3-10*02  12   .--------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -----..................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_83165

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           344     6e-97
IGHD2-2*01                                                                                            12.2    31   
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGCAATCAA	CAGCTG	N/A	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGCAATCAACAGCTGGATGGTTTTGATATG	AREGNQQLDGFDM	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_9744   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCCCCAGGGAGGGGGCTGG  90
V  94.0% (235/250)  IGHV3-48*03  47   .........................................................................T.......A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  G  N  G  G  R  N  I  Y  Y  R  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9744   91   AGTGGGTTTCATACATTGGAAATGGTGGTCGTAACATATACTACAGAGACTCTGTGAAGGGCCGGTTCACCATCTCCCGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-48*03  137  .................A.T.G.A.....A...C..........GC..................A............A............  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  G  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  G  N  Q  Q  L  D  
                    Query_9744   181  AGAACTCACTGTATCTGCAAATGAATGGCCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGCGAGAGAGGGCAATCAACAGCTGGATG  270
V  94.0% (235/250)  IGHV3-48*03  227  .........................CA.......................G...................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-2*01   19   --------------------------------------------------------------------------------......----  24
J  91.8% (45/49)    IGHJ3*02     2    --------------------------------------------------------------------------------------....  5

                                      ---------->                                  
                                      G  F  D  M  W  G  R  G  T  M  V  T  V  S  S  
                    Query_9744   271  GTTTTGATATGTGGGGCCGAGGGACGATGGTCACCGTCTCTTCAG  315
J  91.8% (45/49)    IGHJ3*02     6    C.........C.......A......A...................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_83166

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           290     2e-80
IGHD3-10*01                                                                                           10.3    118  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GACTC	TTCGG	AGGGTTGGGTTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTCTTCGGAGGGTTGGGTTATTGACTCC	ARDSSEGWVIDS	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	219	24	6	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_9745   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.0% (219/249)  IGHV4-34*12  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_9745   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.0% (219/249)  IGHV4-34*12  133  .....G...................A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  F  C  A  R  D  S  S  E  G  W  V 
                    Query_9745   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCCGTTTATTTCTGTGCGAGAGACTCTTCGGAGGGTTGGGTT  270
V  88.0% (219/249)  IGHV4-34*12  223  ....................GC............C...............T..G....A..........---------------------  291
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  13   --------------------------------------------------------------------------.....-----------  17

                                      -------->                                
                                       I  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_9745   271  ATTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  311
J  95.0% (38/40)    IGHJ4*02     7    -......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_337050

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           419     2e-119
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCGTCCTGTAAAATATGGC	ACTATGAAAGTATTGGTTA	CTGTGGGTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCGTCCTGTAAAATATGGCACTATGAAAGTATTGGTTACTGTGGGTTCTTTGACTAC	ARDPSCKIWHYESIGYCGFFDY	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  S  F  T  S  N 
                    Query_9746   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTACCAGCAAC  91
V  96.2% (279/290)  IGHV1-18*04  7    .................................................A..........................C..........T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  T  Y  N  G  N  T  K  Y  V  P 
                    Query_9746   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGATGGATCAGCACTTACAATGGTAACACAAAATATGTACCG  181
V  96.2% (279/290)  IGHV1-18*04  97   .....................................T......................G...................C....C..A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  S  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_9746   182  AAGCTCCAGGGCAGAGTCACCATGACCTCAGACACATCCACGAGCACAGCCTACATGGAACTGAGGAGCCTGAGATCTGACGATACGGCC  271
V  96.2% (279/290)  IGHV1-18*04  187  ...........................A...............................G.......................C......  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------------CDR3-IMGT--------------------------->            
                                       V  Y  Y  C  A  R  D  P  S  C  K  I  W  H  Y  E  S  I  G  Y  C  G  F  F  D  Y  W  G  Q  G 
                    Query_9746   272  GTGTATTACTGTGCGAGAGACCCGTCCTGTAAAATATGGCACTATGAAAGTATTGGTTACTGTGGGTTCTTTGACTACTGGGGCCAGGGA  361
V  96.2% (279/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  89.5% (17/19)    IGHD3-22*01  6    ----------------------------------------.......T....G......-------------------------------  24
J  100.0% (44/44)   IGHJ4*02     5    --------------------------------------------------------------------......................  26

                                                            
                                       T  L  V  T  V  S  S  
                    Query_9746   362  ACCCTGGTCACCGTCTCCTCAG  383
J  100.0% (44/44)   IGHJ4*02     27   ......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_83160

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           361     5e-102
IGHD3-16*01                                                                                           14.1    9.3   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CACTCAATCGAGGACTCCG	TGCTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACTCAATCGAGGACTCCGTGCTTATTACTTTGATCAT	ATLNRGLRAYYFDH	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	259	28	0	90.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  R  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  A  T  H
                    Query_9747   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGAGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACAGTTTTGCCACACA  90
V  90.2% (259/287)  IGHV5-51*03  6    ..............................A......G............................T...........C...A...GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  T  D  S  E  T  H  Y  S  P
                    Query_9747   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTACTGACTCTGAAACCCACTACAGCCC  180
V  90.2% (259/287)  IGHV5-51*03  96   ............................................................T...GG.........T...AGA........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  R  S  I  T  T  A  Y  L  Q  W  N  T  W  R  A  S  D  T  A
                    Query_9747   181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACAGATCCATCACTACCGCCTACCTGCAGTGGAACACATGGAGGGCCTCGGACACCGC  270
V  90.2% (259/287)  IGHV5-51*03  186  ........A..........................AG.......GC...................G..GCCT..A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  T  L  N  R  G  L  R  A  Y  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9747   271  CATATATTACTGCGCGACACTCAATCGAGGACTCCGTGCTTATTACTTTGATCATTGGGGCCAGGGAACCCTGGTCACAGTCTCCTCAG  359
V  90.2% (259/287)  IGHV5-51*03  276  ...G........T....------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                          
D  100.0% (7/7)     IGHD3-16*01  28   ------------------------------------.......----------------------------------------------  34
J  91.3% (42/46)    IGHJ4*02     3    -------------------------------------------........CT.C.......................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_337056

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     3e-98
IGHD5-12*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CATCC	GTGGATATGGTG	CTCCTGGGACGCAAGTTGT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACATCCGTGGATATGGTGCTCCTGGGACGCAAGTTGTCTACGGAATGGACGTC	ARDIRGYGAPGTQVVYGMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  A  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9748   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCACTAGTGCTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   .............................T..........GC....G...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  Q  S  R  I  T  I  S  Q  D  K  S 
                    Query_9748   91   CTGGAGTGGATTGGATACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCCAGAGTCGAATTACCATATCACAAGACAAGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ..............G..........................................A........G...........GT.....C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  I  R  G  Y  G  A 
                    Query_9748   181  AAGAACCAGTTCTCCCTGAACCTGAGCTCTGTGACGGCCGCGGACACGGCCGTATATTACTGTGCGAGGGACATCCGTGGATATGGTGCT  270
V  94.4% (237/251)  IGHV4-31*03  229  ....................G..............T.................G..............A..-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD5-12*01  1    ----------------------------------------------------------------------------........A...--  12

                                      DR3-IMGT------------------------>                                 
                                       P  G  T  Q  V  V  Y  G  M  D  V  W  G  H  G  T  R  V  T  V  S  S 
                    Query_9748   271  CCTGGGACGCAAGTTGTCTACGGAATGGACGTCTGGGGCCACGGGACCAGGGTCACCGTCTCCTCA  336
J  93.9% (46/49)    IGHJ6*02     14   -----------------......T.................A.......C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_83162

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           399     3e-113
IGHD3-3*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GG	TTACGATTTTTGGAGTGGTT	TCAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTTACGATTTTTGGAGTGGTTTCAGACTTTGACTAC	ARVTIFGVVSDFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	271	16	0	94.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T  Y  H 
                    Query_9749   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTACCTACCAC  91
V  94.4% (271/287)  IGHV1-18*04  7    ............................................................................C.......AG.T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  T  D  G  N  T  H  Y  A  H 
                    Query_9749   92   GGTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTACCGATGGGAACACACACTATGCACAC  181
V  94.4% (271/287)  IGHV1-18*04  97   .......G.......................................................TA.A....T......A..........G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  V  Q  G  R  V  T  L  T  T  D  S  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_9749   182  AACGTCCAGGGCAGAGTCACCTTGACCACAGACTCATCCACGAGCACCGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.4% (271/287)  IGHV1-18*04  187  ..GC.................A...........A.............A..........................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  V  T  I  F  G  V  V  S  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9749   272  GTGTATTACTGTGCGAGGGTTACGATTTTTGGAGTGGTTTCAGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  94.4% (271/287)  IGHV1-18*04  277  .................-----------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                          
D  100.0% (20/20)   IGHD3-3*01   4    -------------------....................-------------------------------------------------  23
J  100.0% (45/45)   IGHJ4*02     4    -------------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_337054

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD3-22*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	ATG	GTATTATTCTGATAACAGTGGTTATT	T	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGAATGGTATTATTCTGATAACAGTGGTTATTTCTTTGACTCC	AGEWYYSDNSGYFFDS	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_9750   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGCCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...........................................G.....................G...C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  V  Y  Y  T  G  F  T  D  Y  N  P  S  L  K  S  R  I  T  I  S  L  D  T  S  K  N 
                    Query_9750   91   TGGCTTGGGTTTGTCTATTACACTGGATTCACCGACTACAACCCCTCCCTCAAGAGTCGAATCACCATATCACTAGACACGTCCAAGAAC  180
V  92.7% (227/245)  IGHV4-59*01  139  ...A......A.A.........G...GAG....A..........................G...........G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  G  E  W  Y  Y  S  D  N  S  G 
                    Query_9750   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCATCTATTATTGTGCGGGAGAATGGTATTATTCTGATAACAGTGGT  270
V  92.7% (227/245)  IGHV4-59*01  229  .............A...............................G.G.....C......A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (22/26)    IGHD3-22*01  1    --------------------------------------------------------------------......C.A.....GT......  22

                                      -------------->                                  
                                       Y  F  F  D  S  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_9750   271  TATTTCTTTGACTCCTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  319
D  84.6% (22/26)    IGHD3-22*01  23   ....---------------------------------------------  26
J  95.5% (42/44)    IGHJ4*02     5    -----........A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_337870

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           269     2e-74
IGHD2-21*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CGCTAT	TATTTTGGTGG	CTTTGGGCC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACGCTATTATTTTGGTGGCTTTGGGCCCTACGGGATGGACGTC	AKRYYFGGFGPYGMDV	234	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	44	24	14	1	9	58.3
FR2-IMGT	45	95	51	47	4	0	92.2
CDR2-IMGT	96	119	24	15	9	0	62.5
FR3-IMGT	120	233	114	101	13	0	88.6
CDR3-IMGT (germline)	234	239	6	6	0	0	100
Total	N/A	N/A	248	212	27	9	85.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F           S  D  A  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9751   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCA---------GCGATGCCATCAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  81
V  85.5% (212/248)  IGHV3-23*01  47   ....................................CCTTTAGCA..T.......G..C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  A  S  G  S  A  R  Y  Y  S  D  S  V  K  G  R  F  T  I  A  R  D  N  S  
                    Query_9751   82   AATGGGTCTCAGCGATTAGTGCAAGTGGAAGTGCTAGGTACTATTCAGACTCCGTGAAGGGCCGGTTCACCATCGCCAGAGACAATTCCA  171
V  85.5% (212/248)  IGHV3-23*01  137  .G...........T.......GT.....TG..AGC.CA.....CG.............................T...............  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  V  Y  L  Q  I  L  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  R  Y  Y  F  G  G  F  
                    Query_9751   172  AGAATACGGTCTATCTGCAGATATTGAGTTTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAACGCTATTATTTTGGTGGCTTTG  261
V  85.5% (212/248)  IGHV3-23*01  227  ....C...C.G........A..GAAC..CC......................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.9% (10/11)    IGHD2-21*01  5    --------------------------------------------------------------------------....G......-----  15

                                      T------------------>                                 
                                      G  P  Y  G  M  D  V  W  G  H  G  V  T  V  I  V  S  S 
                    Query_9751   262  GGCCCTACGGGATGGACGTCTGGGGCCACGGGGTCACAGTCATCGTATCCTCA  314
J  85.7% (42/49)    IGHJ6*02     14   ----......T.................A...AC...G....C...C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_38959

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           336     1e-94
IGHD1-7*01                                                                                            12.2    32   
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGCGAGGA	TGGAAGTAC	GACGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGCGAGGATGGAAGTACGACGGCTACTTCTACGGTATGGACGTC	ARDPRGWKYDGYFYGMDV	232	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	117	21	14	1	6	66.7
FR3-IMGT	118	231	114	109	5	0	95.6
CDR3-IMGT (germline)	232	239	8	8	0	0	100
Total	N/A	N/A	245	232	7	6	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9752   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCAATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (232/245)  IGHV4-59*01  49   ...................................C......................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S        W  S  T  N  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_9752   91   TGGATTGGGTATATCTCTT------GGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCAGCATTTCAGTAGACACGTCCAAGAAT  174
V  94.7% (232/245)  IGHV4-59*01  139  ................A..ACAGTG.......................................C...A....................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  R  G  W  K  Y  D  G 
                    Query_9752   175  CAGTTCTCCCTGAAGCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCCGCGAGGATGGAAGTACGACGGC  264
V  94.7% (232/245)  IGHV4-59*01  229  .................G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (8/9)      IGHD1-7*01   9    ---------------------------------------------------------------------------.....C...------  17
J  98.2% (54/55)    IGHJ6*02     8    -----------------------------------------------------------------------------------------.  8

                                      -------------------->                                 
                                       Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9752   265  TACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  98.2% (54/55)    IGHJ6*02     9    ....A.................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_38958

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*06                                                                                           293     2e-81
IGHD3-9*01                                                                                            14.1    8.1  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*06	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGTTTCCCATGGCT	ACTGGTCATT	GACTCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGTTTCCCATGGCTACTGGTCATTGACTCTTTTGACTCC	AKDRFPWLLVIDSFDS	230	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	48	3	0	94.1
CDR2-IMGT	92	115	24	18	6	0	75
FR3-IMGT	116	229	114	107	7	0	93.9
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	206	19	0	91.6


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  G  S  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  W  A  D
                    Query_9753   13   GTCTGGATTCACCTTCGGCAGTTATGGCATGAACTGGGTCCGCCAGGCTCCAGGCAAGGGGTTGGAGTGGGTGGCACTTATTTGGGCTGA  102
V  91.6% (206/225)  IGHV3-33*06  72   ................A.T..C.........C.............................C..............G....A...TA...  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  T  K  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  I  V  Y  L  Q  M  D
                    Query_9753   103  TGGAACTAAGACATACTATGCAGAGTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACATTGTGTATCTGCAAATGGA  192
V  91.6% (206/225)  IGHV3-33*06  162  .....G...T.A............C..............................................CGC..............A.  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-------------------CDR3-IMGT------------------>     
                                        S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  R  F  P  W  L  L  V  I  D  S  F  D  S  W  G
                    Query_9753   193  CAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAAAGATCGTTTCCCATGGCTACTGGTCATTGACTCTTTTGACTCCTGGGG  282
V  91.6% (206/225)  IGHV3-33*06  252  ...............G...........G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                
D  90.0% (9/10)     IGHD3-9*01   17   ------------------------------------------------------------......T...--------------------  26
J  95.3% (41/43)    IGHJ4*02     6    ----------------------------------------------------------------------------.......A......  19

                                                                   
                                        Q  G  A  L  V  T  V  S  S  
                    Query_9753   283  CCAGGGAGCCCTGGTCACCGTCTCCTCAG  311
J  95.3% (41/43)    IGHJ4*02     20   .......A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_38957

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            341     5e-96
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCCACCCGAAAA	TATGACAGTAGTGATTATT	CCTCCCCCCT	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCACCCGAAAATATGACAGTAGTGATTATTCCTCCCCCCTCTTCGACTAC	STRKYDSSDYSSPLFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	108	6	0	94.7
Total	N/A	N/A	240	229	11	0	95.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  T  N  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_9754   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTACTAACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.4% (229/240)  IGHV4-4*02   49   ..............................................G...........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  R  G  G  S  P  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  K 
                    Query_9754   91   GAGTGGATTGGGGAAATCTATCGTGGTGGGAGCCCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCACTAGACAAGTCCAAA  180
V  95.4% (229/240)  IGHV4-4*02   139  ......................A.A........A.....................................A...G.............G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  S  T  R  K  Y  D  S  S  D  Y 
                    Query_9754   181  AACCAGTTCTCCCTGCGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTTCCACCCGAAAATATGACAGTAGTGATTAT  270
V  95.4% (229/240)  IGHV4-4*02   229  ...............AA.....G.....................................------------------------------  288
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  89.5% (17/19)    IGHD3-22*01  8    ------------------------------------------------------------------------.....T.......G....  25

                                      -------------------->                                  
                                       S  S  P  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9754   271  TCCTCCCCCCTCTTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  89.5% (17/19)    IGHD3-22*01  26   .------------------------------------------------------  26
J  97.7% (43/44)    IGHJ4*02     5    -----------...T........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_38956

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         332     4e-93
IGHD3-9*01                                                                                            16.1    2.3  
IGHJ2*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ACTCTTATTTTTCGATCTTCC	GACTGGTT	TGAGCACGGA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACTCTTATTTTTCGATCTTCCGACTGGTTTGAGCACGGATACTTCGATCTC	ARTLIFRSSDWFEHGYFDL	246	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  R  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  S  P  G  K  G  
                    Query_9755     4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTCGCTCCATCAGCAGTGGTGGTCACTACTGGAGTTGGATCCGCCAGTCCCCAGGGAAGGGCC  93
V  92.7% (230/248)  IGHV4-30-4*01  50   .....TCC...A.....A...........G..................A.T.......................C...............  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  Y  S  G  T  V  Y  H  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_9755     94   TGGAGTGGATTGGGTACATCTACTACAGTGGGACCGTCTACCACAATCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCA  183
V  92.7% (230/248)  IGHV4-30-4*01  140  ......................T..........G.AC....T....C...........................................  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                        K  N  Q  V  S  L  K  L  I  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  L  I  F  R  S  S  
                    Query_9755     184  AGAACCAGGTCTCCCTGAAGCTAATCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAACTCTTATTTTTCGATCTTCCG  273
V  92.7% (230/248)  IGHV4-30-4*01  230  ........T.............G.G...........................................----------------------  297
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-9*01     16   -----------------------------------------------------------------------------------------.  16

                                        -IMGT----------------------->                                  
                                        D  W  F  E  H  G  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9755     274  ACTGGTTTGAGCACGGATACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  336
D  100.0% (8/8)     IGHD3-9*01     17   .......--------------------------------------------------------  23
J  100.0% (46/46)   IGHJ2*01       8    -----------------..............................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_38955

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           327     9e-92
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAAG	AGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQEWLPGDWYFDL	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  R  N  Y  W  S  W  I  R  Q  P  P  G  E  R  L  E 
                    Query_9756   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCACTAGAAACTACTGGAGCTGGATTCGGCAGCCCCCAGGGGAGAGACTGGAG  90
V  93.0% (226/243)  IGHV4-59*08  49   ...................C...........G........G...TT................C...............A..G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_9756   91   TGGATAGCGTATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  93.0% (226/243)  IGHV4-59*08  139  .....T.G.......T...........AG...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  F  L  P  A  V  Q  E  W  L 
                    Query_9756   181  CAGTTCTCCCTGAAGATGACCTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTG  270
V  93.0% (226/243)  IGHV4-59*08  229  ...............C...G.........................G.................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  10   ----------------------------------------------------------------------------------........  17

                                      ----------------------->                                  
                                       P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_9756   271  CCAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCGTCAG  328
J  96.1% (49/51)    IGHJ2*01     3    -------......................................A.......C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_38953

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD3-10*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGCGA	CCGCGGTACGACCAGG	ATGTTCG	AGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGACCGCGGTACGACCAGGATGTTCGAGAATGCTCTTGAGATC	AGDRGTTRMFENALEI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	45	6	0	88.2
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	248	8	6	2	0	75
Total	N/A	N/A	248	216	32	0	87.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  G  V  S  G  G  A  I  S  S  S  H  W  W  N  W  V  R  Q  A  P  G  K  G  L 
                    Query_9757   1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGCGGCGCCATTAGCAGCAGTCACTGGTGGAATTGGGTCCGCCAGGCCCCCGGAAAGGGACTG  90
V  87.1% (216/248)  IGHV4-4*01   49   ...................C.........T...T....C.....T...A.........G.............C....A..G.....G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  Q  I  Y  P  G  G  S  A  N  Y  N  P  S  L  R  S  R  V  A  I  S  L  D  A  S  K 
                    Query_9757   91   GAGTGGATTGGGCAAATCTATCCTGGTGGGAGCGCCAACTACAATCCGTCCCTCAGGAGTCGAGTCGCCATTTCGTTAGACGCGTCCAAG  180
V  87.1% (216/248)  IGHV4-4*01   139  ............G.........A.A........A..........C..........A..........A....A..AG.....AA.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       S  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  G  D  R  G  T  T  R  M  F 
                    Query_9757   181  AGCCAGTTCTCCCTGAAGTTGACCTCTGTGACCGCCGCTGACACGGCCGTCTATTTTTGTGCGGGCGACCGCGGTACGACCAGGATGTTC  270
V  87.1% (216/248)  IGHV4-4*01   229  .A................C...G...............G...........G....GC......A.A..----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (7/7)     IGHD3-10*02  9    ------------------------------------------------------------------------------------......  14

                                      ----------------->                                  
                                       E  N  A  L  E  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9757   271  GAGAATGCTCTTGAGATCTGGGGTCAAGGGACAATGGTCACCGTTTCCTCAG  322
D  100.0% (7/7)     IGHD3-10*02  15   .---------------------------------------------------  15
J  89.6% (43/48)    IGHJ3*02     3    ----.....T....T........C....................C..T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_38952

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           313     1e-87
IGHD1-26*01                                                                                           12.2    31   
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCCGT	GCGTT	GGAGCT	CCCCCC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTTGGAGCTCCCCCCCTACGGTATGGACGTC	ALELPPYGMDV	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	21	9	0	70
FR3-IMGT	135	248	114	102	12	0	89.5
Total	N/A	N/A	248	224	24	0	90.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  A  V  H  W  V  R  Q  A  S  G  R  G  L  
                    Query_9758   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTGTGCACTGGGTCCGCCAGGCTTCCGGGAGAGGGCTGG  90
V  90.3% (224/248)  IGHV3-73*01  47   .........A...........................................A...........................A........  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  S  T  E  T  N  R  Y  A  T  A  Y  A  A  S  L  I  G  R  F  T  V  S  R  L  
                    Query_9758   91   AGTGGGTTGGCCGTATTTCCACCGAGACTAATAGATACGCGACAGCATATGCTGCCTCGCTGATAGGCAGGTTCACCGTCTCCAGACTTG  180
V  90.3% (224/248)  IGHV3-73*01  137  .................AGA.G.A.AG....C..T....................G...G...A.............A........GA..  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  E  K  T  A  Y  L  Q  M  N  S  L  Q  T  E  D  T  A  V  Y  F  R  A  L  E  L  P  P  Y  
                    Query_9758   181  ATTCAGAGAAGACGGCGTATCTGCAAATGAACAGCCTGCAAACCGAAGACACGGCCGTGTATTTCCGTGCGTTGGAGCTCCCCCCCTACG  270
V  90.3% (224/248)  IGHV3-73*01  227  .....A....C...........................A.......G................A.T..----------------------  294
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  100.0% (6/6)     IGHD1-26*01  10   -------------------------------------------------------------------------......-----------  15
J  100.0% (49/49)   IGHJ6*02     14   -------------------------------------------------------------------------------------.....  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9758   271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (49/49)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_38951

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           339     2e-95
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCGGACGAATA	ACTATGGTCCGGGGAGT	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGACATCGGACGAATAACTATGGTCCGGGGAGTCCCTTTGACTAC	SRHRTNNYGPGSPFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	234	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  S  T  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_9759   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTAGCACTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  93.2% (234/251)  IGHV4-39*01  49   ...............................G...............T.G...........G...........................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  P  G  G  S  T  Q  Y  I  P  S  L  K  S  R  L  T  M  S  V  D  S  S 
                    Query_9759   91   CTGGAGTGGATTGGGAGTATCTATCCTGGTGGGAGCACCCAGTACATCCCGTCCCTCAAGAGTCGACTCACCATGTCCGTAGACTCGTCC  180
V  93.2% (234/251)  IGHV4-39*01  139  ........................TA.A...........T.C....A...................G.......A.........A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  R  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  S  R  H  R  T  N  N  Y  G 
                    Query_9759   181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGAGCGCCGCAGACACGGCTGTGTATTACTGTTCGAGACATCGGACGAATAACTATGGT  270
V  93.2% (234/251)  IGHV4-39*01  229  ...................A..............C............................G.......-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.1% (16/17)    IGHD3-10*01  6    ----------------------------------------------------------------------------------........  13

                                      GT------------------>                                  
                                       P  G  S  P  F  D  Y  W  G  Q  G  T  L  V  T  A  S  S  
                    Query_9759   271  CCGGGGAGTCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGCCTCCTCAG  325
D  94.1% (16/17)    IGHD3-10*01  14   T........----------------------------------------------  22
J  97.7% (43/44)    IGHJ4*02     5    -----------...................................T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_38950

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           353     9e-100
IGHD4-17*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGTGG	TACGGTGACTAC	TC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGTGGTACGGTGACTACTCTGATGGTTTTGATATC	AKPWYGDYSDGFDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  N  Y  A  M  A  W  V  R  Q  A  P  G  K  G  L  
                    Query_9760   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTTAGCAACTATGCCATGGCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (237/248)  IGHV3-23*01  47   ...................................A.........G..........AG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  G  S  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9760   91   AGTGGGTCTCATCTATTAGAGGTAGTGGTAGTAATACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.6% (237/248)  IGHV3-23*01  137  ...........G.......T.........G...GC.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  P  W  Y  G  D  Y  S  
                    Query_9760   181  AGAACACGCTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATATTACTGTGCGAAACCGTGGTACGGTGACTACTCTG  270
V  95.6% (237/248)  IGHV3-23*01  227  .................C................................G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD4-17*01  5    --------------------------------------------------------------------------............----  16
J  98.0% (49/50)    IGHJ3*02     1    ----------------------------------------------------------------------------------------..  2

                                      ------------->                                  
                                      D  G  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9760   271  ATGGTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  318
J  98.0% (49/50)    IGHJ3*02     3    ...C............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_137675

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           18.0    0.60 
IGHJ3*01                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	TTTCGCTCGTG	TACTATGAT	GCAACAGGGCGG	GATCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGTTTCGCTCGTGTACTATGATGCAACAGGGCGGGATCCTTTTGAGGGT	AGVSLVYYDATGRDPFEG	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9761   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-33*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  R  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9761   91   AGTGGGTGGCAGTTATTTGGTATGATGGAAGAAACAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  92.8% (231/249)  IGHV3-33*01  137  ................A..............T..T...................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  K  L  Y  K  Q  M  N  S  M  A  A  E  A  T  S  V  Y  Y  C  A  G  V  S  L  V  Y  Y  D  
                    Query_9761   181  AGAACAAGTTGTATAAGCAAATGAACAGCATGGCGGCCGAGGCCACGTCTGTATATTACTGTGCGGGAGTTTCGCTCGTGTACTATGATG  270
V  92.8% (231/249)  IGHV3-33*01  227  ......C.C.....CT.............C..AGA.......A....G....G............A...---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD3-22*01  5    --------------------------------------------------------------------------------.........-  13

                                      IMGT--------------------->                                  
                                      A  T  G  R  D  P  F  E  G  W  G  Q  G  T  V  R  T  V  S  S  
                    Query_9761   271  CAACAGGGCGGGATCCTTTTGAGGGTTGGGGCCAAGGGACAGTGCGCACCGTCTCTTCAG  330
J  85.7% (42/49)    IGHJ3*01     2    -----------...G.......T.TC...............A..GT..............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_147791

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           405     4e-115
IGHD1-26*01                                                                                           18.0    0.67  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAGCCAACGGTC	GTGGGAGCCACT	CTCCCCTTTCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCCAACGGTCGTGGGAGCCACTCTCCCCTTTCTCTTGACTTT	AKANGRGSHSPLSLDF	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	69	5	0	93.2
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	292	4	4	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  S  G  E  S  L  K  I  S  C  E  A  S  G  Y  S  F  T  
                    Query_9762   2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGTCGGGGGAGTCTCTGAAGATCTCCTGTGAGGCTTCTGGGTACAGCTTTACCA  91
V  94.5% (275/291)  IGHV5-51*03  2    ..G...............................A...C..........................A...G......A.............  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  Y  P  G  D  S  D  T  R  Y  
                    Query_9762   92   ATTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGATTCATCTATCCTGGTGACTCTGATACCAGATACA  181
V  94.5% (275/291)  IGHV5-51*03  92   GC.....................................................GA.................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  P  F  Q  G  H  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  R  S  L  K  A  S  D  
                    Query_9762   182  GCCCGCCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGCGCAGCCTGAAGGCCTCGGACC  271
V  94.5% (275/291)  IGHV5-51*03  182  .....T.............G............................G...................A....................A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      P  A  M  Y  F  C  A  K  A  N  G  R  G  S  H  S  P  L  S  L  D  F  W  G  Q  G  T  L  V  T  
                    Query_9762   272  CCGCCATGTATTTCTGTGCGAAAGCCAACGGTCGTGGGAGCCACTCTCCCCTTTCTCTTGACTTTTGGGGCCAGGGAACCCTGGTCACCG  361
V  94.5% (275/291)  IGHV5-51*03  272  ............A........---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  91.7% (11/12)    IGHD1-26*01  7    ---------------------------------........T...---------------------------------------------  18
J  95.2% (40/42)    IGHJ4*02     7    ---------------------------------------------------------......AC.........................  39

                                               
                                      V  S  S  
                    Query_9762   362  TCTCCTCAG  370
J  95.2% (40/42)    IGHJ4*02     40   .........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_349930

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           350     8e-99
IGHD2-2*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTATCGACTGTACCAT	TACCACCTGC	CGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTATCGACTGTACCATTACCACCTGCCGTTTTGACTTC	ASLIDCTITTCRFDF	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  N  S  R  N  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9763   1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAACAGTCGTAATTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.2% (236/248)  IGHV4-39*01  49   ..................A.....................G....A...G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  F  G  S  I  N  Y  S  G  T  T  Y  Y  T  A  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_9763   91   CTGGAGTGGTTTGGGAGTATCAATTATAGTGGGACCACCTACTACACCGCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  95.2% (236/248)  IGHV4-39*01  139  .........A...........T............G...........A.C.........................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  I  D  C  T  I  T 
                    Query_9763   181  AAGAACCATTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGCCTTATCGACTGTACCATTACC  270
V  95.2% (236/248)  IGHV4-39*01  229  ........G..................................................C........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.0% (9/10)     IGHD2-2*01   16   --------------------------------------------------------------------------------------....  19

                                      ----------------->                                  
                                       T  C  R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9763   271  ACCTGCCGTTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  90.0% (9/10)     IGHD2-2*01   20   .G....----------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_137677

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           325     2e-91
IGHD6-19*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	AAATCC	ATATCAGTGGCTGGT	GTGGAG	GACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AAATCCATATCAGTGGCTGGTGTGGAGGACCAC	KSISVAGVEDH	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9764   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTCAGTTCCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGC  90
V  93.0% (225/242)  IGHV3-30*03  47   ........................C...................AG.....G.....................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  L  I  S  Y  D  G  S  N  M  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9764   91   AATGGGTGGCACTTATATCATATGATGGAAGTAATATGCACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.0% (225/242)  IGHV3-30*03  137  .G.........G........................AAT...................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  S  T  V  Y  L  Q  M  N  S  L  R  S  E  D  T  A  V  Y  Y  C  K  S  I  S  V  A  G  V  E  
                    Query_9764   181  AGAGCACAGTTTATCTCCAAATGAACAGCCTGAGAAGTGAGGACACGGCTGTGTATTACTGTAAATCCATATCAGTGGCTGGTGTGGAGG  270
V  93.0% (225/242)  IGHV3-30*03  227  ...A...GC.G.....G..................GC.........................----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  93.3% (14/15)    IGHD6-19*01  5    --------------------------------------------------------------------...G...........-------  19
J  95.0% (38/40)    IGHJ4*02     9    -----------------------------------------------------------------------------------------.  9

                                      ---->                                  
                                      D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9764   271  ACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCATCAG  309
J  95.0% (38/40)    IGHJ4*02     10   ..T...............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_349932

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            367     5e-104
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	CTTTTAAGGGGCACGGAAGCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTTTAAGGGGCACGGAAGCAACTAC	ARAFKGHGSNY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                     <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9765  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-7*03  47   .............................................G............................................  136
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                     -------------><-------CDR2-IMGT------><---------------------------------------------------
                                     E  W  V  A  N  I  K  Q  D  G  G  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9765  91   AGTGGGTGGCCAACATAAAGCAAGATGGAGGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (242/249)  IGHV3-7*03  137  .............................A............................................................  226
                                     E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                     -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                     K  S  S  L  H  L  Q  M  S  G  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  F  K  G  H  G  S  
                    Query_9765  181  AGAGCTCACTGCATCTGCAAATGAGCGGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAGAGCTTTTAAGGGGCACGGAAGCA  270
V  97.2% (242/249)  IGHV3-7*03  227  ...A.......T............A.A.........................G................---------------------  295
                                     K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                     ---->                                  
                                     N  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9765  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (39/39)   IGHJ4*02    10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_11004

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           341     5e-96
IGHD3-16*02                                                                                           12.2    32   
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGT	TCGTTA	CCCAATCTTGGCCG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGTTCGTTACCCAATCTTGGCCGCTACTACGGTTTGGACGTC	ARGRSLPNLGRYYGLDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_9766   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  94.7% (231/244)  IGHV4-59*01  49   ...................C...........G........G............................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  Y  T  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_9766   91   TGGATTGGGCATATCTATTACACTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  94.7% (231/244)  IGHV4-59*01  139  .........T............G..........A......................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  S  L  P  N  L  G  R 
                    Query_9766   181  CAGTTCTCCCTGAAGTTAAATTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGGTCGTTCGTTACCCAATCTTGGCCGC  270
V  94.7% (231/244)  IGHV4-59*01  229  ...............C.G.GC................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*02  28   ---------------------------------------------------------------------......---------------  33
J  98.1% (51/52)    IGHJ6*02     11   -----------------------------------------------------------------------------------------.  11

                                      ----------------->                                 
                                       Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9766   271  TACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  321
J  98.1% (51/52)    IGHJ6*02     12   .........A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_137670

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TGGGCCTC	CTATGATAATAGTGGTCATTAC	GGCCCGCGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATGGGCCTCCTATGATAATAGTGGTCATTACGGCCCGCGATTTGACTCC	AKWASYDNSGHYGPRFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  D  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9767   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGGGATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.5% (227/248)  IGHV3-23*01  47   ..............................................CT..........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  H  S  V  D  H  T  F  Y  A  D  S  V  K  G  R  F  I  V  S  R  D  N  S  
                    Query_9767   91   AGTGGGTCTCAAGTATTAGTCATAGTGTTGATCACACATTCTACGCAGACTCCGTGAAGGGCCGATTCATCGTCTCCAGAGACAATTCCA  180
V  91.5% (227/248)  IGHV3-23*01  137  ...........GC.......GG.....G..G.AG.....A........................G....C.A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  L  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  W  A  S  Y  D  N  S  
                    Query_9767   181  AGAACACTCTCTATCTGCTAATGAGTAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAATGGGCCTCCTATGATAATAGTG  270
V  91.5% (227/248)  IGHV3-23*01  227  .......G..G.......A.....AC..........................A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.9% (20/22)    IGHD3-22*01  7    ----------------------------------------------------------------------------........G.....  20

                                      IMGT--------------------->                                
                                      G  H  Y  G  P  R  F  D  S  W  G  Q  G  A  L  V  T  V  S  S
                    Query_9767   271  GTCATTACGGCCCGCGATTTGACTCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTC  328
D  90.9% (20/22)    IGHD3-22*01  21   ..T.....--------------------------------------------------  28
J  95.1% (39/41)    IGHJ4*02     6    -----------------.......A.............A...................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_223563

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           344     6e-97
IGHD3-3*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATCGGGCCCCGGGG	TTTGGAGTGGT	CAGCCCCGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCGGGCCCCGGGGTTTGGAGTGGTCAGCCCCGCTGACTAC	ARNRAPGFGVVSPADY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  S  F  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9768   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTAGTTTTGAAATGAACTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  94.4% (234/248)  IGHV3-48*03  47   ...................................A............A........................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  S  G  F  T  I  Y  Y  A  D  S  V  K  R  R  F  T  V  S  R  D  N  G  
                    Query_9768   91   AGTGGATTTCATACATTAGTAGTAGTGGTTTTACCATATACTACGCAGACTCTGTGAAGCGCCGATTCACCGTCTCCAGAGACAACGGCA  180
V  94.4% (234/248)  IGHV3-48*03  137  .....G.......................AG............................G...........A...............C..  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  I  N  S  L  T  V  E  D  T  A  V  Y  Y  C  A  R  N  R  A  P  G  F  G  
                    Query_9768   181  AGAACTCACTGTATCTGCAGATAAACAGCCTGACAGTCGAGGACACGGCTGTATATTACTGTGCGAGAAATCGGGCCCCGGGGTTTGGAG  270
V  94.4% (234/248)  IGHV3-48*03  227  ...................A..G..........G..C...............T...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-3*01   12   -----------------------------------------------------------------------------------.......  18

                                      T------------------>                                  
                                      V  V  S  P  A  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_9768   271  TGGTCAGCCCCGCTGACTACTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTCAG  324
D  100.0% (11/11)   IGHD3-3*01   19   ....--------------------------------------------------  22
J  97.6% (40/41)    IGHJ4*02     8    -------------....................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_223562

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           285     4e-79
IGHD1-26*01                                                                                           12.2    32   
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAC	GGGGGCTAC	CCCTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACGGGGGCTACCCCTATGATGCTCTTGACATC	ARDDGGYPYDALDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	216	34	0	86.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  P  G  F  S  I  R  D  Y  A  V  H  W  V  R  Q  A  P  G  T  G  L  
                    Query_9769   1    GGTCCCTGAGACTCTCCTGTGCAGCCCCAGGATTCAGTATCAGAGACTATGCTGTGCACTGGGTCCGCCAGGCTCCAGGCACGGGGCTGG  90
V  86.4% (216/250)  IGHV3-30*04  47   ..........................T.T.......CCT....TAG.......A...........................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  C  V  A  L  I  S  Y  D  D  T  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  G  N  S  
                    Query_9769   91   ACTGTGTAGCTCTTATATCATATGATGACACGAAGAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGGCAACTCCA  180
V  86.4% (216/250)  IGHV3-30*04  137  .G..G..G..AG...............GA.GT..T..............................................A...T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  E  T  V  Y  L  E  M  S  N  L  G  A  D  D  T  A  V  Y  F  C  A  R  D  D  G  G  Y  P  Y  
                    Query_9769   181  GGGAGACGGTGTATCTGGAAATGAGCAACCTGGGGGCTGACGACACGGCTGTCTATTTCTGTGCGAGAGATGACGGGGGCTACCCCTATG  270
V  86.4% (216/250)  IGHV3-30*04  227  A.A.C...C........C......A..G....A.A.....G...........G....A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD1-26*01  9    --------------------------------------------------------------------------...A.....-------  17
J  96.0% (48/50)    IGHJ3*02     1    ----------------------------------------------------------------------------------------..  2

                                      ------------->                                  
                                      D  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9769   271  ATGCTCTTGACATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  318
J  96.0% (48/50)    IGHJ3*02     3    .....T....T.....................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_349937

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	AATCAC	GTATCACTATGATAATAATGGTTAT	AAG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATCACGTATCACTATGATAATAATGGTTATAAGTACTTTGACTAC	ARGITYHYDNNGYKYFDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_9770   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGTTGGGTCCGCCAGCCCCCGGGGAAGGGGCTGGAA  90
V  95.1% (233/245)  IGHV4-34*01  49   ........................................................C...A.............A..............G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  I  N  H  G  G  D  S  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9770   91   TGGCTTGGGGAAATCAATCATGGTGGAGACTCTAAGTACAACCCATCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  ...A.................A.....AG.A.C..C........G.............................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  I  T  Y  H  Y  D  N  N 
                    Query_9770   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGAATCACGTATCACTATGATAATAAT  270
V  95.1% (233/245)  IGHV4-34*01  229  .................................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  88.0% (22/25)    IGHD3-22*01  1    -----------------------------------------------------------------------....T.........G..G.  19

                                      -------------------->                                  
                                       G  Y  K  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9770   271  GGTTATAAGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  88.0% (22/25)    IGHD3-22*01  20   ......-------------------------------------------------  25
J  100.0% (46/46)   IGHJ4*02     3    ---------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_223567

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           369     2e-104
IGHD5-12*01                                                                                           23.8    0.011 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCTGCTATCGGATACTTT	GTGGCTACGATT	CGGGTGAGGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTGCTATCGGATACTTTGTGGCTACGATTCGGGTGAGGGCATGGACGTC	ARLCYRILCGYDSGEGMDV	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  S  T  N  F  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9771   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGGAGTACTAATTTCTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  97.2% (243/250)  IGHV4-39*01  49   ...............................G.........C....G..G..A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9771   91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  97.2% (243/250)  IGHV4-39*01  139  ..........................................................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  D  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  C  Y  R  I  L  C 
                    Query_9771   181  AAGGACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACTCTGCTATCGGATACTTTGT  270
V  97.2% (243/250)  IGHV4-39*01  229  ...A.....................G............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD5-12*01  10   ----------------------------------------------------------------------------------------..  11

                                      3-IMGT----------------------->                                 
                                       G  Y  D  S  G  E  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9771   271  GGCTACGATTCGGGTGAGGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
D  100.0% (12/12)   IGHD5-12*01  12   ..........-----------------------------------------------------  21
J  100.0% (42/42)   IGHJ6*02     21   ---------------------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_223566

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           335     4e-94
IGHD3-22*01                                                                                           25.7    0.003
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCCCA	ATTACTTTGATGGTAGTGG	CG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCCCAATTACTTTGATGGTAGTGGCGACTGGAACCTCGATCTC	AKDPNYFDGSGDWNLDL	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  T  S  Y  G  M  H  W  V  R  R  A  P  G  K  G  L  
                    Query_9772   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCACTAGTTATGGCATGCACTGGGTCCGCCGGGCTCCAGGCAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-30*18  47   ....................................C.....G...C......................A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  Y  D  G  S  N  K  Y  S  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9772   91   AATGGGTGGCCAGTATCTCATATGATGGAAGCAATAAATACTCTGCAGCCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-30*18  137  .G........AGT...A..............T..........A.....A.........................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  V  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  P  N  Y  F  D  G  
                    Query_9772   181  GGAACACGGTCTATTTGCAAATGAACAGCCTGAGACCTGAAGACACGGCTGTGTATTACTGTGCGAAAGACCCCAATTACTTTGATGGTA  270
V  92.8% (232/250)  IGHV3-30*18  227  A.......C.G...C....................G....G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  89.5% (17/19)    IGHD3-22*01  3    ---------------------------------------------------------------------------......A....A...  17

                                      GT-------------------->                                  
                                      S  G  D  W  N  L  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9772   271  GTGGCGACTGGAACCTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  327
D  89.5% (17/19)    IGHD3-22*01  18   ....-----------------------------------------------------  21
J  96.1% (49/51)    IGHJ2*01     3    ------.....T..T..........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_223569

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD1-1*01                                                                                            12.2    31   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTCC	AEEKRRVPRGTFHS	239	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	48	3	0	94.1
CDR2-IMGT	101	124	24	22	2	0	91.7
FR3-IMGT	125	238	114	110	4	0	96.5
CDR3-IMGT (germline)	239	246	8	7	1	0	87.5
Total	N/A	N/A	232	219	13	0	94.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  I  T  F  T  T  Y  A  V  S  W  V  R  Q  T  P  G  K  G  L  E  W  V  S  A  I  
                    Query_9773   15   GTGCAGCCTCTGGAATCACCTTTACCACCTATGCCGTGAGCTGGGTCCGCCAGACTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCCATTA  104
V  94.4% (219/232)  IGHV3-23*01  65   ..............T.........G..G.......A.................G...............................T....  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  G  G  A  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  K  N  T  L  Y  L  
                    Query_9773   105  GTGGTGGTGGTGCTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGAAGAACACGCTGTATCTGC  194
V  94.4% (219/232)  IGHV3-23*01  155  .....A......G...............................................G.........C...................  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      Q  M  N  R  L  R  A  D  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  G  T  F  H  S  W  
                    Query_9773   195  AAATGAACAGACTGAGAGCCGACGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTCCTGGG  284
V  94.4% (219/232)  IGHV3-23*01  245  ..........C...........G........................A....--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------......------------------------------  17
J  93.2% (41/44)    IGHJ4*02     5    ----------------------------------------------------------------------------....G...A.....  18

                                                                    
                                      G  Q  G  T  L  V  S  V  S  S  
                    Query_9773   285  GCCAGGGAACCCTGGTCTCCGTCTCCTCAG  314
J  93.2% (41/44)    IGHJ4*02     19   .................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_223568

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            322     2e-90
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ6*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAGG	ATTACTATGATAGAAGT	CGTCACGACGAATT	CGGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCAGGATTACTATGATAGAAGTCGTCACGACGAATTCGGTCTGGACGTC	ARDQDYYDRSRHDEFGLDV	247	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	132	27	17	4	6	63
FR3-IMGT	133	246	114	110	4	0	96.5
CDR3-IMGT (germline)	247	254	8	8	0	0	100
Total	N/A	N/A	254	232	16	6	91.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  D  S  F  S  S  D  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9774   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCATTCAGCAGCGATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  91.3% (232/254)  IGHV4-4*02   49   ..................G............G...CA.......TAG.......................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><--------CDR2-IMGT--------><-----------------------------------------------
                                       E  W  I  G  E  V  F  D  S  D  S  G  S  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K 
                    Query_9774   91   GAGTGGATTGGGGAAGTCTTTGATAGTGATAGTGGGAGCGCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAG  180
V  91.3% (232/254)  IGHV4-4*02   139  ...............A...A.C....------.......A..................................................  222
                                       E  W  I  G  E  I  Y  H  S        G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K 

                                      -----FR3-IMGT----------------------------------------------------><-----------------------
                                       S  N  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  D  Y  Y  D 
                    Query_9774   181  TCCAACAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGAGAGACCAGGATTACTATGAT  270
V  91.3% (232/254)  IGHV4-4*02   223  .....G................A.....G...........................G.................----------------  296
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                   
D  94.1% (16/17)    IGHD3-22*01  3    -------------------------------------------------------------------------------...........  13

                                      CDR3-IMGT----------------------->                                 
                                       R  S  R  H  D  E  F  G  L  D  V  W  G  P  G  T  T  V  A  V  S  S 
                    Query_9774   271  AGAAGTCGTCACGACGAATTCGGTCTGGACGTCTGGGGCCCAGGGACCACGGTTGCCGTCTCCTCA  336
D  94.1% (16/17)    IGHD3-22*01  14   ..T...------------------------------------------------------------  19
J  91.3% (42/46)    IGHJ6*02     17   --------------------....A...............A............CA...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_223435

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     4e-93
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_9775   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  S  L  K  P  R  V  T  I  S  L  D  T  S  K  N 
                    Query_9775   91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCTCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-59*08  139  ...A....G......T.......T..............................AG............A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G 
                    Query_9775   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGT  270
V  93.4% (228/244)  IGHV4-59*08  229  .............A......C..........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_9775   271  TATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  334
J  94.2% (49/52)    IGHJ1*01     1    ------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_193618

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	ATTTAGAATATCAGTTTTCACGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATTTAGAATATCAGTTTTCACGTACTACTTTGACTAC	AREFRISVFTYYFDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  R  S  F  Y  W  S  W  I  R  *  P  P  G  K  G  L  E 
                    Query_9776   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGAAGTTTCTACTGGAGCTGGATCCGGTAGCCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...................C.....................T....A...................C.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  M  Y  Y  S  G  T  P  N  Y  N  P  S  L  E  S  R  L  T  I  S  L  D  T  S  K  N 
                    Query_9776   91   TGGGTTGGGTACATGTACTACAGTGGGACCCCCAACTATAACCCCTCCCTCGAGAGTCGACTCACCATATCACTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ...A.......T..C..T..........G.A.......C............A........G...........G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  F  R  I  S  V  F  T  Y 
                    Query_9776   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGAATTTAGAATATCAGTTTTCACGTAC  270
V  93.5% (229/245)  IGHV4-59*01  229  ...............................................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  100.0% (46/46)   IGHJ4*02     1    ----------------------------------------------------------------------------------------..  2

                                      ----------->                                
                                       Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9776   271  TACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
J  100.0% (46/46)   IGHJ4*02     3    ............................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_193617

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           276     3e-76
IGHD3-10*01                                                                                           14.1    8.9  
IGHJ6*02                                                                                              58.4    1e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTGATCA	ATGGCTGGGGAACTTACTATAA	T	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGATCAATGGCTGGGGAACTTACTATAATTACGGGATGGCCGCC	ARGHRVINGWGTYYNYGMAA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	104	10	0	91.2
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	215	29	6	86


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_9777   4    CCCTGAGACTCTCCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.0% (215/250)  IGHV4-34*01  50   .....TCC...A..........C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_9777   94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.0% (215/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  F  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  I  N  G  
                    Query_9777   184  AGAACCAGTTCTTCCTGAAATTGAGCTCCGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGATCAATGGCT  273
V  86.0% (215/250)  IGHV4-34*01  224  ............C......GC.......T....C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  77.3% (17/22)    IGHD3-10*01  9    ------------------------------------------------------------------------------------....T.  14

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  A  A  W  G  Q  G  S  A  V  S  V  S  S 
                    Query_9777   274  GGGGAACTTACTATAATTACGGGATGGCCGCCTGGGGCCAAGGGTCCGCGGTCTCCGTCTCCTCA  338
D  77.3% (17/22)    IGHD3-10*01  15   C...G.G...T.....-------------------------------------------------  30
J  87.5% (42/48)    IGHJ6*02     15   -----------------.....T....A..T.............A..A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_193616

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_9778   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_9778   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_9778   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_9778   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_193611

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_9779   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_9779   91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_9779   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_9779   271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_193610

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            332     3e-93
IGHD1-26*01                                                                                           10.3    121  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTGCCAT	GGAGC	AATGGACCCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTGCCATGGAGCAATGGACCCAATACTACTTTGACGCC	ARSAMEQWTQYYFDA	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9780   1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAGTAGTTATTGGATGACCTGGGTCCGCCAGGCTCCAGGTAAGGGGCTGG  90
V  92.7% (230/248)  IGHV3-7*01   47   .....................C........................C..........G.....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  V  E  Y  Y  V  D  S  V  R  G  R  F  T  M  S  R  D  N  A  
                    Query_9780   91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGTGGAATACTACGTGGACTCTGTGAGGGGCCGATTCACCATGTCCAGAGACAACGCCA  180
V  92.7% (230/248)  IGHV3-7*01   137  ....................C............A.A.......T.............A...............C................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  S  V  S  L  Q  M  S  S  L  T  A  E  D  T  A  V  Y  Y  C  A  R  S  A  M  E  Q  W  T  
                    Query_9780   181  GGAACTCAGTCTCTCTGCAAATGAGCAGCCTGACAGCCGAGGACACGGCTGTATACTACTGTGCGAGATCTGCCATGGAGCAATGGACCC  270
V  92.7% (230/248)  IGHV3-7*01   227  A.......C.G.A...........A........G..................G..T............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  10   ----------------------------------------------------------------------------.....---------  14

                                      ---------------->                                
                                      Q  Y  Y  F  D  A  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9780   271  AATACTACTTTGACGCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
J  95.7% (44/46)    IGHJ4*02     1    ---...........TA.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_193613

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            299     2e-83
IGHD2-21*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCGACCGAGGA	ACTGCTA	ACCTCTTCGAGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACCGAGGAACTGCTAACCTCTTCGAGAATGCTCTTAGTATC	AADRGTANLFENALSI	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	56	27	22	5	0	81.5
FR2-IMGT	57	107	51	47	4	0	92.2
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	218	27	0	89


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  R  G  H  I  T  S  S  H  W  W  N  W  V  R  Q  P  P  G  K  G  
                    Query_9781   1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTCGTGGCCACATCACCAGTAGTCACTGGTGGAACTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  89.0% (218/245)  IGHV4-4*02   47   ..A.....TCC...A..............G.....TC.....G.......A.........GT............................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Q  I  Y  Q  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  K  S  
                    Query_9781   91   TGGAGTGGATTGGACAAATTTATCAGAGTGGGAGCACCAATTATAACCCGTCCCTCAGGAGTCGAGTCACCATTTCAGTGGACAAGTCCA  180
V  89.0% (218/245)  IGHV4-4*02   137  .............GG....C.....T..............C..C.............A...............A.....A..........  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  L  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  A  D  R  G  T  A  N  L  
                    Query_9781   181  GGAACCTCTTCTCCCTGACGCTGACCTCTGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGGCCGACCGAGGAACTGCTAACCTCT  270
V  89.0% (218/245)  IGHV4-4*02   227  A.....AG..........A.....G...........................G............-------------------------  291
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-21*02  18   -----------------------------------------------------------------------------.......------  24

                                      T------------------>                                  
                                      F  E  N  A  L  S  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9781   271  TCGAGAATGCTCTTAGTATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
J  93.8% (45/48)    IGHJ3*02     3    ------.....T..GA......................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_193612

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           352     3e-99
IGHD6-13*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTA	ATAGCAGC	CCAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTAATAGCAGCCCAGACTACGGTATTGACGTC	ARGNSSPDYGIDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_9782   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-11*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  T  A  S  G  N  S  I  F  Y  T  D  S  V  K  G  R  F  T  I  P  R  D  N  A  
                    Query_9782   91   AGTGGGTTTCATACATTACTGCTAGTGGAAATAGTATATTTTACACAGACTCTGTGAAGGGCCGATTCACCATCCCCAGGGACAACGCCA  180
V  95.2% (237/249)  IGHV3-11*01  137  ..................G.AG......T.G..CC....AC...G.............................T...............  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  N  S  S  P  D  Y  
                    Query_9782   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAGAGGTAATAGCAGCCCAGACTACG  270
V  95.2% (237/249)  IGHV3-11*01  227  ....................................................G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-13*01  5    ------------------------------------------------------------------------........----------  12
J  98.0% (49/50)    IGHJ6*02     13   ------------------------------------------------------------------------------------......  18

                                      ---------->                                 
                                      G  I  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9782   271  GTATTGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  98.0% (49/50)    IGHJ6*02     19   ....G.......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_236378

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           382     4e-108
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	267	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  H
                    Query_9783   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATCA  90
V  92.1% (267/290)  IGHV5-51*01  6    ....................C........A.....................G.........A......C.........C.......GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  P
                    Query_9783   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCCC  180
V  92.1% (267/290)  IGHV5-51*01  96   ...................................................G.......A.....G.......G....C.....C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  I  A
                    Query_9783   181  GTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACATCGC  270
V  92.1% (267/290)  IGHV5-51*01  186  ...............G........C...................................G.......G.................C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_9783   271  CTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  350
V  92.1% (267/290)  IGHV5-51*01  276  .A.......C.....G....------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    -----------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_236379

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           339     1e-95
IGHD3-3*01                                                                                            27.6    7e-04
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	TTGGAGTGGTTATT	TATA	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATTGGAGTGGTTATTTATAGACTTC	ARELEWLFIDF	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	234	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  N  G  S  Y  Y  W  T  W  I  R  Q  A  P  G  K  G 
                    Query_9784   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAATGGGAGTTACTACTGGACCTGGATCCGGCAGGCCCCAGGGAAGGGA  90
V  93.2% (234/251)  IGHV4-61*01  49   ...........................................G...T.............G.............C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  F  T  S  G  T  T  N  Y  H  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_9784   91   CTGGAGTGGATTGGGTGTATCTTTACTAGTGGGACCACCAACTACCATCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCC  180
V  93.2% (234/251)  IGHV4-61*01  139  ................A.....A.TAC.......G..........A.C..............................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  L  E  W  L  F  I 
                    Query_9784   181  AAGAATCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTATTGTGCGAGAGAATTGGAGTGGTTATTTATA  270
V  93.2% (234/251)  IGHV4-61*01  229  .....C...............C...............................G.....C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (14/14)   IGHD3-3*01   13   ------------------------------------------------------------------------..............----  26

                                      ----->                                  
                                       D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_9784   271  GACTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  310
J  95.0% (38/40)    IGHJ4*02     9    ....A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_236374

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           315     5e-88
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	240	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E  
                    Query_9785   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAGT  93
V  91.4% (222/243)  IGHV4-59*08  50   .....TCC...A....C........................A.................A........C.........A...........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  S  L  K  P  R  V  T  I  S  L  D  T  S  K  N  
                    Query_9785   94   GGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCTCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGTCCAAGAACC  183
V  91.4% (222/243)  IGHV4-59*08  140  ..A....G......T.......T..............................AG............A...G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------------CDR3-IM
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G  
                    Query_9785   184  AGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGTT  273
V  91.4% (222/243)  IGHV4-59*08  230  ............A......C..........................G.....C..........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  91.7% (11/12)    IGHD3-10*01  4    ----------------------------------------------------------------------........G...--------  15

                                      GT-------------------------->                                  
                                      Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_9785   274  ATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  336
J  94.2% (49/52)    IGHJ1*01     1    -----------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_236372

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           318     6e-89
IGHD2-21*01                                                                                           14.1    9.1  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCT	CTATTCC	ACATGAATCCGGGGGTTCCCCCGACAGACGGCGATTTCGGTCCCATTAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCTCTATTCCACATGAATCCGGGGGTTCCCCCGACAGACGGCGATTTCGGTCCCATTATTTTGACTAT	AKVSIPHESGGSPDRRRFRSHYFDY	243	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  A  L  T  W  V  R  Q  A  P  G  T  G  L  
                    Query_9786   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACGTTTAGCAGCTATGCCCTGACCTGGGTCCGCCAGGCTCCAGGGACGGGGTTGG  90
V  90.8% (226/249)  IGHV3-23*01  47   .....................C...............C...............A...G.......................A....C...  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  E  I  S  S  S  S  G  R  K  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9786   91   AATGGGTCTCAGAGATTAGTAGTAGTAGTGGTAGGAAACACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCTA  180
V  90.8% (226/249)  IGHV3-23*01  137  .G..........CT......G.....G.......C.C.T....C............................................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  V  Y  L  Q  M  E  S  L  R  G  E  D  T  A  V  Y  Y  C  A  K  V  S  I  P  H  E  S  
                    Query_9786   181  AGAACACGGTGTATCTGCAAATGGAAAGCCTGAGAGGCGAGGACACAGCCGTGTACTACTGTGCGAAAGTCTCTATTCCACATGAATCCG  270
V  90.8% (226/249)  IGHV3-23*01  227  ........C..............A.C..........C.........G.....A..T.............---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD2-21*01  22   ------------------------------------------------------------------------.......-----------  28

                                      -----CDR3-IMGT-------------------------------->                                  
                                      G  G  S  P  D  R  R  R  F  R  S  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9786   271  GGGGTTCCCCCGACAGACGGCGATTTCGGTCCCATTATTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  351
J  97.7% (42/43)    IGHJ4*02     6    --------------------------------------........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_236370

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           339     2e-95
IGHD2-8*02                                                                                            19.9    0.16 
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-8*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCGGGAC	TTGTACTGGT	TACACCTGCTACGACGCTC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCGGGACTTGTACTGGTTACACCTGCTACGACGCTCCTTTTGATATC	ARDPGTCTGYTCYDAPFDI	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  V  S  Y  N  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9787   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCTCCGTCAGTTACAACTCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTG  90
V  93.9% (232/247)  IGHV3-53*01  47   ...................................A........AG.....A.....G..............................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  I  L  Y  S  G  G  Y  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  K  
                    Query_9787   91   AGTGGGTCTCAATTCTTTATAGTGGTGGTTATACATACTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.9% (232/247)  IGHV3-53*01  137  ...........G..A.......C......AGC......................A...................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------CDR3-IM
                                      N  T  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  V  Y  Y  C  A  R  D  P  G  T  C  T  G  Y  
                    Query_9787   181  ACACCCTGTATCTTCAAATGAACAGCCTGAGAACCGAGGACACGGCCGTGTATTACTGTGCGAGAGATCCCGGGACTTGTACTGGTTACA  270
V  93.9% (232/247)  IGHV3-53*01  227  ....G...........................G..................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (10/10)   IGHD2-8*02   7    ----------------------------------------------------------------------------..........----  16

                                      GT----------------------->                                  
                                      T  C  Y  D  A  P  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9787   271  CCTGCTACGACGCTCCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCGTCAG  330
J  97.8% (44/45)    IGHJ3*02     6    ---------------........................................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_26045

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           283     1e-78
IGHD6-6*01                                                                                            21.8    0.041
IGHJ6*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTCTG	CTTAGTGGTTGGCCGTG	ATAGCAGCTCTTCC	GGCCTGAGCT	TCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TTAGTGGTTGGCCGTGATAGCAGCTCTTCCGGCCTGAGCTTC	LVVGRDSSSSGLSF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	241	113	100	13	0	88.5
Total	N/A	N/A	241	211	30	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  G  S  G  F  I  F  S  D  Y  G  V  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_9788   1    GGTCCCTGAGACTCTCCTGTTCAGGCTCTGGATTCATCTTCAGTGACTATGGTGTACAGTGGGTCCGCCAGGCTCCAGGAAAGGGACTGG  90
V  87.6% (211/241)  IGHV3-64*05  47   ........................C...........C.......AG.....C.A.G..C....................G..........  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  A  I  G  G  H  G  T  T  T  Y  Y  T  D  P  L  N  G  R  F  I  V  S  R  D  N  S  
                    Query_9788   91   AATTTGTTTCGGCTATTGGTGGTCATGGGACTACCACATACTACACAGACCCACTGAATGGCAGATTCATCGTCTCCAGAGACAATTCCA  180
V  87.6% (211/241)  IGHV3-64*05  137  ...A......A......A..A..A.....GG..G..........G.....T..G....G..........C.A..................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  V  Y  L  Q  M  S  N  L  R  I  E  D  T  S  V  Y  F  C  L  V  V  G  R  D  S  S  S  
                    Query_9788   181  AGAACACGGTGTATCTTCAAATGAGCAATCTGAGAATTGAGGACACGTCTGTGTATTTCTGCTTAGTGGTTGGCCGTGATAGCAGCTCTT  270
V  87.6% (211/241)  IGHV3-64*05  227  ........C.....G............G.......GC..........G.........A...-----------------------------  287
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y                                
D  92.9% (13/14)    IGHD6-6*01   5    ------------------------------------------------------------------------------..........G.  16

                                      ------------->                                 
                                      S  G  L  S  F  W  G  Q  G  T  T  F  T  V  S  S 
                    Query_9788   271  CCGGCCTGAGCTTCTGGGGCCAAGGGACCACGTTCACCGTCTCCTCA  317
D  92.9% (13/14)    IGHD6-6*01   17   ..---------------------------------------------  18
J  97.1% (34/35)    IGHJ6*02     28   ------------....................G..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_254116

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           350     8e-99
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATCGTGGTG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATCGTGGTGACTACTTTGACCAC	ARGLHYYDRGDYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  R  V  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9789   1    ACTCTGTCCCTCACCTGCACTGTCTCTCGTGTCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*03  49   ..C........................G...G...................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_9789   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAATAAGTCCCTCAAGAGTCGAATTACCATATCGGTAGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*03  139  ..................................G............CCC................G..........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R 
                    Query_9789   181  AAGAACCAGTTCTCCCTGACGCTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCCATTACTATGATCGT  270
V  94.8% (237/250)  IGHV4-31*03  229  ...................A.....G...........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (16/18)    IGHD3-22*01  3    ----------------------------------------------------------------------------...........A..  16

                                      ----------------->                                  
                                       G  D  Y  F  D  H  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_9789   271  GGTGACTACTTTGACCACTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  322
D  88.9% (16/18)    IGHD3-22*01  17   A...------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    ----...........T....................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_99958

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           344     6e-97
IGHD3-3*01                                                                                            43.0    2e-08
IGHJ5*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGGCGAGGCC	GTATTACGACTTTTGGAGTGGTTGTTAT	CGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGCGAGGCCGTATTACGACTTTTGGAGTGGTTGTTATCGGCTGGTTCGACCCC	ARGGRGRITTFGVVVIGWFDP	240	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	232	12	0	95.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_9790   4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTATTATTGGAGCTGGATCCGCCAGTCTCCAGGGAAGGGGCTGGAAT  93
V  95.1% (232/244)  IGHV4-34*01  50   .....TCC...A..................................C..C..................C.C.................G.  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  K  K  
                    Query_9790   94   GGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAAGAAAC  183
V  95.1% (232/244)  IGHV4-34*01  140  ...........................................................G............................C.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------------CDR3-IM
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  R  G  R  I  T  T  F  
                    Query_9790   184  AGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGGGGCGAGGCCGTATTACGACTTTTG  273
V  95.1% (232/244)  IGHV4-34*01  230  ...................C............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  92.9% (26/28)    IGHD3-3*01   1    ---------------------------------------------------------------------------.........T.....  15

                                      GT-------------------------->                                  
                                      G  V  V  V  I  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9790   274  GAGTGGTTGTTATCGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  336
D  92.9% (26/28)    IGHD3-3*01   16   ........A....--------------------------------------------------  28
J  97.9% (46/47)    IGHJ5*02     5    ----------------..........................................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_117578

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           355     3e-100
IGHD3-3*01                                                                                            43.0    2e-08 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGGCGAGGCC	GTATTACGACTTTTGGAGTGGTTGTTAT	CGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGCGAGGCCGTATTACGACTTTTGGAGTGGTTGTTATCGGCTGGTTCGACCCC	ARGGRGRITTFGVVVIGWFDP	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  R  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_9791   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTATTATCGGAGCTGGATCCGCCAGTCTCCAGGGAAGGGGCTGGAA  90
V  96.3% (236/245)  IGHV4-34*01  49   ...............................................C..CT.................C.C.................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  K  K 
                    Query_9791   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAAGAAA  180
V  96.3% (236/245)  IGHV4-34*01  139  ............................................................G............................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  R  G  R  I  T  T  F 
                    Query_9791   181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGGGGCGAGGCCGTATTACGACTTTT  270
V  96.3% (236/245)  IGHV4-34*01  229  ....................C............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  92.9% (26/28)    IGHD3-3*01   1    ----------------------------------------------------------------------------.........T....  14

                                      MGT-------------------------->                                  
                                       G  V  V  V  I  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9791   271  GGAGTGGTTGTTATCGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  334
D  92.9% (26/28)    IGHD3-3*01   15   .........A....--------------------------------------------------  28
J  97.9% (46/47)    IGHJ5*02     5    -----------------..........................................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_117579

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           333     1e-93
IGHD3-3*01                                                                                            10.3    118  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATC	GAGTG	CCCTTCCAATTTG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCGAGTGCCCTTCCAATTTGACGGTATGGGCGTC	ARNRVPFQFDGMGV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9792   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTTCTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.8% (228/243)  IGHV4-59*08  49   .......................................A..AG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  N  G  Y  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_9792   91   TGGATTGGCTATATGTATTACAATGGGTACACCTACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGTCCAAGAAC  180
V  93.8% (228/243)  IGHV4-59*08  139  ........G.....C.......G....AG....A..................................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       L  F  S  L  M  L  T  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  N  R  V  P  F  Q  F  D  G 
                    Query_9792   181  CTGTTCTCCCTGATGCTGACCTCTGTGACCTCCGCAGACACGGCCGTGTATTACTGTGCGAGAAATCGAGTGCCCTTCCAATTTGACGGT  270
V  93.8% (228/243)  IGHV4-59*08  229  .A...........A.....G..........G................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-3*01   16   -------------------------------------------------------------------.....------------------  20
J  93.6% (44/47)    IGHJ6*02     16   -------------------------------------------------------------------------------------.....  20

                                      -------->                                 
                                       M  G  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_9792   271  ATGGGCGTCTGGGGCCAAGGGACGACGGTCAGCGTCTCCTCA  312
J  93.6% (44/47)    IGHJ6*02     21   ....A..................C.......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_133268

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            346     2e-97
IGHD6-6*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGTCGA	ATACCAGCTCGTCC	ACGAGGAAAGTCGG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGTCGAATACCAGCTCGTCCACGAGGAAAGTCGGACTTTGACTAC	ARSRIPARPRGKSDFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  G  V  S  G  G  S  I  S  S  D  N  W  W  G  W  V  R  Q  P  P  G  K  G  L 
                    Query_9793  1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGTGGCTCCATCAGCAGTGATAACTGGTGGGGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.1% (233/245)  IGHV4-4*02  49   ...................C.........................AG..........A................................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  T  G  S  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_9793  91   GAGTGGATTGGGGAGATCTATCATACTGGGAGCACCAGCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTCGACAAGTCCAAG  180
V  95.1% (233/245)  IGHV4-4*02  139  ..............A..........G...........A.......................................A............  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                      N  Q  F  S  L  N  L  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  S  R  I  P  A  R  P  R 
                    Query_9793  181  AACCAGTTCTCCCTGAACCTGACGTCTGTGACCGCCGCGGACACGGCCATGTATTACTGTGCGAGGAGTCGAATACCAGCTCGTCCACGA  270
V  95.1% (233/245)  IGHV4-4*02  229  .................G....GC........................G................-------------------------  293
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  92.9% (13/14)    IGHD6-6*01  5    ------------------------------------------------------------------------...G..........----  18

                                     -------------------->                                  
                                      G  K  S  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9793  271  GGAAAGTCGGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (45/45)   IGHJ4*02    4    ----------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_99959

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           369     2e-104
IGHD2-21*02                                                                                           18.0    0.66  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACTG	GGTGGGGACTACTAT	GGTCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTC	VRRLGGDYYGPFEF	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	69	5	0	93.2
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	46	5	0	90.2
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	105	9	0	92.1
CDR3-IMGT (germline)	292	298	7	6	1	0	85.7
Total	N/A	N/A	294	265	29	0	90.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  E  I  S  C  K  A  Y  G  Y  A  F  N  
                    Query_9794   5    AGATGCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCCGGGGAGTCTCTGGAGATCTCCTGTAAGGCTTATGGATACGCCTTTAACG  94
V  90.1% (265/294)  IGHV5-51*01  2    ..G.........................G........................A...............G..C.......AG.....C.A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  G  W  V  R  Q  K  P  E  K  G  L  D  W  M  W  V  I  Y  P  D  D  L  D  T  T  Y  
                    Query_9794   95   ACTACTGGATCGGCTGGGTGCGCCAGAAGCCCGAGAAAGGCCTGGATTGGATGTGGGTCATCTATCCTGATGACCTTGATACGACATACA  184
V  90.1% (265/294)  IGHV5-51*01  92   G..........................T.....G............G......G..A............G....TC......C.G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  N  T  I  Y  L  R  W  S  S  L  K  A  S  D  
                    Query_9794   185  GTCCGTCCTTCCAAGGCCAGGTCACAATCTCAGTCGACAAGTCCATCAACACCATCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  90.1% (265/294)  IGHV5-51*01  182  .C.......................C.......C..............G....GC........A..........................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  V  R  R  L  G  G  D  Y  Y  G  P  F  E  F  W  G  Q  G  T  Q  V  T  V  S  
                    Query_9794   275  CCGCCATGTATTATTGTGTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTCTGGGGCCAGGGAACCCAGGTCACCGTCTCCT  364
V  90.1% (265/294)  IGHV5-51*01  272  .............C....C.....------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  86.7% (13/15)    IGHD2-21*02  11   -----------------------------.....T....G....----------------------------------------------  25
J  93.0% (40/43)    IGHJ4*02     6    --------------------------------------------------.....C.A.................T..............  45

                                         
                                      S  
                    Query_9794   365  CAG  367
J  93.0% (40/43)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_58279

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD6-19*01                                                                                           12.2    30   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGACGGGT	TGGCTG	CCC	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGACGGGTTGGCTGCCCGACGAC	ARGTGWLPDD	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  Y  C  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9795   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTACTACTGCAACTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   ...............................G..........A..........G.G..................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  N  T  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9795   91   TGGATTGGACATATCTACAACACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.4% (228/244)  IGHV4-59*01  139  ........GT.......TT...G.....G.............................................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  T  G  W  L  P  D  D  W 
                    Query_9795   181  CAGTTCTCCTTGAACCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGACGGGTTGGCTGCCCGACGACTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  .........C....G....G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  12   ------------------------------------------------------------------------......------------  17
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------...T.....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_9795   271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.5% (39/40)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_133262

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           372     3e-105
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCAGTTGGCCCATTC	TGGTTCGGGGAGT	CCCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGTTGGCCCATTCTGGTTCGGGGAGTCCCTCTTGACTAC	ARGSWPILVRGVPLDY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	264	26	0	91


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  N  V  S  C  K  A  S  G  D  T  F  T  N  Y
                    Query_9796   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAACGTTTCCTGCAAGGCGTCTGGCGACACTTTCACCAACTA  90
V  91.0% (264/290)  IGHV1-46*01  6    ..................G................................G..............A.....AT....C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  H  W  V  R  Q  A  P  G  L  G  L  E  W  M  A  M  I  N  P  T  G  G  R  T  T  Y  T  Q
                    Query_9796   91   CTATATACACTGGGTGCGACAGGCCCCTGGACTTGGGCTTGAGTGGATGGCAATGATCAACCCTACTGGTGGTAGGACAACGTACACACA  180
V  91.0% (264/290)  IGHV1-46*01  96   ......G.........................AA................G...A..........G.........C....GC...G....  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  L  Q  G  R  V  T  L  T  R  E  T  S  T  S  T  V  Y  M  E  L  R  S  L  T  S  E  D  T  A
                    Query_9796   181  GAAGTTACAGGGCAGAGTCACCTTGACTAGGGAGACGTCCACGAGCACAGTGTACATGGAACTGAGAAGCCTGACATCTGAGGACACGGC  270
V  91.0% (264/290)  IGHV1-46*01  186  ......C...............A....C.....C.................C........G.....C.......G...............  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  G  S  W  P  I  L  V  R  G  V  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S
                    Query_9796   271  CGTCTATTACTGTGCGAGAGGCAGTTGGCCCATTCTGGTTCGGGGAGTCCCTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTC  360
V  91.0% (264/290)  IGHV1-46*01  276  ...G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (13/13)   IGHD3-10*01  10   -----------------------------------.............------------------------------------------  22
J  100.0% (42/42)   IGHJ4*02     7    -----------------------------------------------------.....................................  43

                                           
                                        S  
                    Query_9796   361  CTCAG  365
J  100.0% (42/42)   IGHJ4*02     44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_117571

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-20*01                                                                                           357     1e-100
IGHD3-22*01                                                                                           12.2    31    
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-20*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGGGCACTG	GGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGATGGGGCACTGGGTTATTACTATGGTATCGACGTC	VRDGALGYYYGIDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9797   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGGCATGAGCTGGGTCCGCCAAGCTCCGGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-20*01  47   ............................................................................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  H  W  N  G  A  S  T  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  A  
                    Query_9797   91   AGTGGGTCTCTGGTATTCATTGGAATGGTGCAAGTACAGCTTATGCAGACTCTGTGAAGGGCCGATTCACCATTTCCAGAGACATTGCCA  180
V  95.6% (239/250)  IGHV3-20*01  137  .................A............GT..C....G.................................C..........AC....  226
                                      E  W  V  S  G  I  N  W  N  G  G  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  V  R  D  G  A  L  G  Y  Y  
                    Query_9797   181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCCTTGTATCACTGTGTGCGAGATGGGGCACTGGGTTATTACT  270
V  95.6% (239/250)  IGHV3-20*01  227  ...............................................................C.A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R                       
D  100.0% (6/6)     IGHD3-22*01  20   --------------------------------------------------------------------------------......----  25
J  94.1% (48/51)    IGHJ6*02     12   --------------------------------------------------------------------------------------....  15

                                      ------------->                                 
                                      Y  G  I  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_9797   271  ATGGTATCGACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  317
J  94.1% (48/51)    IGHJ6*02     16   .C.....G.............A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_133261

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9798   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9798   91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.0% (230/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_9798   181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.0% (230/250)  IGHV3-21*01  227  ....C...................................G.........G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_9798   271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTATCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  95.3% (41/43)    IGHJ4*02     6    -----------------------..........................GG...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_133266

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           350     8e-99
IGHD3-3*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CAAA	ATTGCGGTTTTTGGAACGGTTATTA	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAATTGCGGTTTTTGGAACGGTTATTAACTACTACGGTATGGACGTC	AKIAVFGTVINYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  D  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9799   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCACCTTCAGTAGTCATGATATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.9% (234/244)  IGHV3-48*03  47   ......................A........................T....A.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  T  
                    Query_9799   91   AGTGGGTTTCATTCATTAGTAGTAGTGGCAGCACCATATACTACGCAGACTCTGTGAAGGGCCGATTCAGCATCTCCAGAGACAACACCA  180
V  95.9% (234/244)  IGHV3-48*03  137  ............A...............T..T.....................................C................G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  K  S  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  I  A  V  F  G  T  V  
                    Query_9799   181  AGAAGTCACTGTATCTGCAAATGAGCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCCAAAATTGCGGTTTTTGGAACGGTTA  270
V  95.9% (234/244)  IGHV3-48*03  227  ....C...................A.......................................--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  84.0% (21/25)    IGHD3-3*01   3    --------------------------------------------------------------------...A..A........GT.....  24

                                      GT-------------------->                                 
                                      I  N  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9799   271  TTAACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
D  84.0% (21/25)    IGHD3-3*01   25   ...-----------------------------------------------------  27
J  100.0% (53/53)   IGHJ6*02     10   ---.....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_133267

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9800   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ......................................C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_9800   91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P 
                    Query_9800   181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC  270
V  90.6% (221/244)  IGHV4-59*01  229  ...........G...C....C...........T............G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  95.7% (44/46)    IGHJ5*02     6    ------------------------------------------------------------------------------............  17

                                                                        
                                       W  G  Q  G  A  L  V  S  V  S  S  
                    Query_9800   271  TGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  304
J  95.7% (44/46)    IGHJ5*02     18   ............A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_58272

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGCCCCC	ARGVGNNWFAP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9801   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9801   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_9801   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  98.0% (50/51)    IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       A  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9801   271  GCCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  98.0% (50/51)    IGHJ5*02     12   .A......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_133265

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           378     3e-107
IGHD3-10*01                                                                                           14.1    8.8   
IGHJ3*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATGG	GGTTCGAGGA	CACTCGACCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTTCGAGGACACTCGACCGTTTTTGATATC	ARDGVRGHSTVFDI	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	20	4	0	83.3
FR2-IMGT	75	125	51	51	0	0	100
CDR2-IMGT	126	146	21	21	0	0	100
FR3-IMGT	147	260	114	107	7	0	93.9
CDR3-IMGT (germline)	261	266	6	6	0	0	100
Total	N/A	N/A	266	254	12	0	95.5


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  N  S  W  S  W  I  R  
                    Query_9802   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTAACTCTTGGAGCTGGATCCGGC  90
V  95.5% (254/266)  IGHV4-59*08  26   ................T..............................................G....T...AC................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_9802   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTATAATCCCTCCCTTAAGAGTCGAGTCACCA  180
V  95.5% (254/266)  IGHV4-59*08  116  .............................................................C..C........C................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  I  D  T  S  K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  
                    Query_9802   181  TATCAATAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGATG  270
V  95.5% (254/266)  IGHV4-59*08  206  .....G.....................................C........C.......................C.........----  291
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -------CDR3-IMGT--------------->                                  
                                      G  V  R  G  H  S  T  V  F  D  I  W  G  Q  G  T  T  I  I  V  S  S  
                    Query_9802   271  GGGTTCGAGGACACTCGACCGTTTTTGATATCTGGGGCCAAGGGACAACGATCATCGTCTCTTCAG  336
D  90.0% (9/10)     IGHD3-10*01  11   -......G...-------------------------------------------------------  20
J  93.2% (41/44)    IGHJ3*02     7    ----------------------..........................T.G...C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_75886

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           343     2e-96
IGHD4-17*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGTATCT	TACGGTGAC	CCCACAAGTTACTCACGGTG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGGGTATCTTACGGTGACCCCACAAGTTACTCACGGTGTTGACTTC	VKGYLTVTPQVTHGVDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  V  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9803   1    GGTCCCTGAGGCTCTCCTGTGCAGCCTCTGGATTCAGCGTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-23*01  47   ..........A.........................C.T......G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  I  S  G  A  Y  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_9803   91   AGTGGGTCTCATCTATTAGTATTAGTGGTGCTTACACATACTACGTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAGTTCCA  180
V  94.0% (234/249)  IGHV3-23*01  137  ...........G........GG........G.AG...........C......................................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  I  Y  Y  C  V  K  G  Y  L  T  V  T  P  
                    Query_9803   181  AGAACACGCTGTATCTGCAAATGAGCAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGTGAAAGGGTATCTTACGGTGACCCCAC  270
V  94.0% (234/249)  IGHV3-23*01  227  ........................A.........................G............C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD4-17*01  5    ----------------------------------------------------------------------------.........-----  13

                                      GT-------------------->                                  
                                      Q  V  T  H  G  V  D  F  W  G  L  G  T  L  A  T  V  S  S  
                    Query_9803   271  AAGTTACTCACGGTGTTGACTTCTGGGGCCTGGGAACCCTGGCCACCGTCTCCTCAG  327
J  92.9% (39/42)    IGHJ4*02     7    ---------------......A........A...........T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_258478

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           321     7e-90
IGHD3-3*01                                                                                            18.0    0.58 
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGC	TACGATTTT	GGGTCATTGTGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGCTACGATTTTGGGTCATTGTGGTGGTTCGACCCC	ARGRYDFGSLWWFDP	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	24	15	6	3	62.5
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	249	229	17	3	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9804   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-21*01  47   ...............................A......T........T.TAG.....A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  M  S  G  S  S  S     S  Y  Y  A  D  S  V  K  G  R  F  T  I  P  R  D  N  A  
                    Query_9804   91   AGTGGGTCTCATCCATGAGTGGAAGCAGTAGT---AGTTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCCCCAGAGACAACGCCA  177
V  92.0% (229/249)  IGHV3-21*01  137  ................T...A.T..T......TAC.TA....................................T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  V  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  R  Y  D  F  G  S  
                    Query_9804   178  AGAACTCACTGGTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGGTCGCTACGATTTTGGGTCAT  267
V  92.0% (229/249)  IGHV3-21*01  227  ...........TA.......................................G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD3-3*01   5    --------------------------------------------------------------------------.........-------  13

                                      ---------------->                                  
                                      L  W  W  F  D  P  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_9804   268  TGTGGTGGTTCGACCCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  97.8% (45/46)    IGHJ5*02     6    -----.........................C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_75884

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           452     3e-129
IGHD6-13*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAC	ATAGCAGCAGCTGGT	CGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTAC	ARSHSSSWSGFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	289	0	0	100


Alignments

                                       <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                     Query_9805   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  100.0% (289/289)  IGHV5-51*03  6    ..........................................................................................  95
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                       ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                         W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                     Query_9805   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  100.0% (289/289)  IGHV5-51*03  96   ..........................................................................................  185
                                         W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                       ------------------------------------------FR3-IMGT----------------------------------------
                                         S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                     Query_9805   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  100.0% (289/289)  IGHV5-51*03  186  ..........................................................................................  275
                                         S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                       ------------><--------------CDR3-IMGT-------------->                                  
                                         M  Y  Y  C  A  R  S  H  S  S  S  W  S  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_9805   271  CATGTATTACTGTGCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  100.0% (289/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                         M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)    IGHD6-13*01  5    -----------------------...............------------------------------------------------  19
J  100.0% (44/44)    IGHJ4*02     5    ------------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_75885

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            304     1e-84
IGHD3-9*01                                                                                            12.2    33   
IGHJ1*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-9*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AAAGGAGACGGGAAATGAAATGACCACATCCAA	ATATTT	CTTA	CACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAAAAGGAGACGGGAAATGAAATGACCACATCCAAATATTTCTTACAC	AKEKETGNEMTTSKYFLH	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	248	8	7	1	0	87.5
Total	N/A	N/A	248	221	27	0	89.1


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  G  V  S  I  S  S  S  R  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_9806  1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGTCTCCATCAGTAGTAGTAGGTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  89.1% (221/248)  IGHV4-4*02  49   .......................C.......G.........C.......AC.......G...............................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  L  G  E  I  Y  H  G  G  A  T  N  Y  N  P  S  F  K  S  R  V  T  M  S  E  D  R  S  K 
                    Query_9806  91   GAGTGGCTTGGTGAGATCTATCATGGTGGGGCAACCAATTACAACCCGTCCTTCAAGAGTCGGGTCACCATGTCAGAAGACAGGTCCAAG  180
V  89.1% (221/248)  IGHV4-4*02  139  ......A....G..A.........A.....AGC.....C............C..........A........A....T.....A.......  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                      N  Q  F  T  L  N  L  R  S  V  T  A  A  D  T  A  I  Y  Y  C  A  K  E  K  E  T  G  N  E  M 
                    Query_9806  181  AATCAGTTCACCCTTAACCTGAGGTCTGTGACCGCCGCGGACACGGCCATCTATTACTGTGCGAAAGAAAAGGAGACGGGAAATGAAATG  270
V  89.1% (221/248)  IGHV4-4*02  229  ..C......T....G..G.....C........................G.G.............G...----------------------  296
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         

                                     GT--------------------->                                  
                                      T  T  S  K  Y  F  L  H  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_9806  271  ACCACATCCAAATATTTCTTACACTGGGGCCAGGGCACCCTGGTCATCGTCTCCTCAG  328
D  100.0% (6/6)     IGHD3-9*01  9    -----------......-----------------------------------------  14
J  97.3% (36/37)    IGHJ1*01    16   ---------------------.........................C...........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_75880

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           300     9e-84
IGHD1-7*01                                                                                            19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTGCTGGCCTTAA	AACTGGAACT	TCCGCCTACCTCTT	CTACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTGCTGGCCTTAAAACTGGAACTTCCGCCTACCTCTTCTACAGTTTGGACGTC	ARSAGLKTGTSAYLFYSLDV	247	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	246	123	106	8	9	86.2
CDR3-IMGT (germline)	247	252	6	6	0	0	100
Total	N/A	N/A	252	224	19	9	88.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  F  T  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9807   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCTTTACTTCTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  88.9% (224/252)  IGHV4-59*01  49   ...............................G....A.C.G.AG...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><--------------------------------------------------------
                                       W  I  G  Y  I  Y  D  S  E  T  T  N  Y  T  N  Y  N  P  S  L  K  S  R  V  T  F  S  V  D  T 
                    Query_9807   91   TGGATTGGCTATATCTATGACAGTGAGACCACCAACTACACCAACTATAATCCCTCCCTCAAGAGTCGAGTCACCTTTTCAGTAGACACG  180
V  88.9% (224/252)  IGHV4-59*01  139  ........G.........T......G..G..........---------..C........................A.A............  219
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y           N  P  S  L  K  S  R  V  T  I  S  V  D  T 

                                      FR3-IMGT---------------------------------------------------------><-----------------------
                                       S  M  N  H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  A  G  L  K  T 
                    Query_9807   181  TCCATGAATCACTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATCTGCTGGCCTTAAAACT  270
V  88.9% (224/252)  IGHV4-59*01  220  ....A...C..G................GC..........................................------------------  291
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                   
D  100.0% (10/10)   IGHD1-7*01   6    --------------------------------------------------------------------------------------....  9

                                      --CDR3-IMGT------------------------>                                 
                                       G  T  S  A  Y  L  F  Y  S  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9807   271  GGAACTTCCGCCTACCTCTTCTACAGTTTGGACGTCTGGGGCCAAGGGACCACCGTCACCGTCTCCTCA  339
D  100.0% (10/10)   IGHD1-7*01   10   ......---------------------------------------------------------------  15
J  93.9% (46/49)    IGHJ6*02     14   --------------------....G..A.........................G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_75881

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           322     2e-90
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	AGTGGC	TACTATGACACTAGTGGT	GACATTCC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGTGGCTACTATGACACTAGTGGTGACATTCCCAACTGGTTCGACCCC	SGYYDTSGDIPNWFDP	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	109	5	0	95.6
Total	N/A	N/A	242	224	18	0	92.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  R  R  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_9808   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCGTCAGCCGTCGTAATTACTATTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  92.6% (224/242)  IGHV4-61*01  50   .....TCC...A....C........................A..G...G......C.....C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  R  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  
                    Query_9808   94   TGGAGTGGATTGGATATATCTATTACCGTGGGACCACCAACTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCCA  183
V  92.6% (224/242)  IGHV4-61*01  140  .............G............A......G............C..............................G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  T  Y  Y  C  S  G  Y  Y  D  T  S  G  D  
                    Query_9808   184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCACTTATTACTGTAGTGGCTACTATGACACTAGTGGTGACA  273
V  92.6% (224/242)  IGHV4-61*01  230  ..................................................GTG.........----------------------------  291
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                             
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------........T.G.......----  22

                                      T------------------>                                  
                                      I  P  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9808   274  TTCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (50/50)   IGHJ5*02     2    ----..................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_258471

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           425     3e-121
IGHD5-12*01                                                                                           10.3    137   
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	GTGGC	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGGCAACTACAACTACTACACTATGGACGTC	ARRGNYNYYTMDV	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	73	1	0	98.6
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	108	6	0	94.7
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	294	283	11	0	96.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  E  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_9809   5    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  94
V  96.3% (283/294)  IGHV5-51*01  2    ...................................A......................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  H  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  
                    Query_9809   95   GCCATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACA  184
V  96.3% (283/294)  IGHV5-51*01  92   ..T.C.......G........................................................G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  P  F  Q  G  Q  V  T  M  S  V  D  K  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_9809   185  GCCCGCCCTTCCAAGGCCAGGTCACCATGTCAGTCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  96.3% (283/294)  IGHV5-51*01  182  .....T......................C....C.......................A................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                 
                                      T  A  S  Y  Y  C  A  R  R  G  N  Y  N  Y  Y  T  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9809   275  CCGCCAGCTATTACTGTGCGAGACGTGGCAACTACAACTACTACACTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  363
V  96.3% (283/294)  IGHV5-51*01  272  ......TG................-----------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD5-12*01  10   ------------------------.....------------------------------------------------------------  14
J  94.9% (56/59)    IGHJ6*02     4    ------------------------------.....T........GG...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_258470

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            367     5e-104
IGHD3-22*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTG	ATTACTATGATAGTAGTGGTTA	CCCA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTGATTACTATGATAGTAGTGGTTACCCAGACTAC	EP*LL***WLPRL	239	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	238	114	112	0	2	98.2
CDR3-IMGT (germline)	239	243	5	5	0	0	100
Total	N/A	N/A	245	242	1	2	98.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9810   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  98.8% (242/245)  IGHV4-4*02   49   ..............................................G...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_9810   91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  98.8% (242/245)  IGHV4-4*02   139  ..........................................................................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A    D  G  R  V  L  L  C  E  P  *  L  L  *  *  *  W  
                    Query_9810   181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGG--ACGGCCGTGTATTACTGTGCGAGCCTTGATTACTATGATAGTAGTGGT  268
V  98.8% (242/245)  IGHV4-4*02   229  ........................................AC.......................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (22/22)   IGHD3-22*01  3    ----------------------------------------------------------------------....................  22

                                      ----------->                                  
                                      L  P  R  L  L  G  P  G  N  P  G  H  R  L  L   
                    Query_9810   269  TACCCAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  314
D  100.0% (22/22)   IGHD3-22*01  23   ..--------------------------------------------  24
J  100.0% (40/40)   IGHJ4*02     9    ------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_258473

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-16*01                                                                                           10.3    115  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGACGAGGGGCA	GGGGG	CGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGACGAGGGGCAGGGGGCGGTTGACTCT	ARVDEGQGAVDS	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  K  V  S  G  G  S  I  T  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9811   1    ACCCTGTCCCTCACCTGCAAGGTCTCTGGGGGCTCCATCACGACTTACTACTGGAGTTGGATCCGACAGCCCCCAGGGAAGGGACTGGAG  90
V  91.8% (224/244)  IGHV4-59*01  49   ...................CT........T..........GT.G............C........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  V  N  R  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_9811   91   TGGATTGGGTATATCTATTACACTGGCAGTGTCAACCGCAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAC  180
V  91.8% (224/244)  IGHV4-59*01  139  ......................G...G..CAC....TA..............................A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  G  T  A  V  Y  Y  C  A  R  V  D  E  G  Q  G  A  V  D 
                    Query_9811   181  CAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGGCACGGCCGTCTATTACTGTGCGAGAGTTGACGAGGGGCAGGGGGCGGTTGAC  270
V  91.8% (224/244)  IGHV4-59*01  229  ...............C...G.................A.........G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -----------------------------------------------------------------------------.....--------  22
J  92.9% (39/42)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9811   271  TCTTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  307
J  92.9% (39/42)    IGHJ4*02     12   .AC.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_258472

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           391     6e-111
IGHD2-2*01                                                                                            19.9    0.18  
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GGGACT	AGGATATTGGCGTGGTACC	GACTGCAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGGACTAGGATATTGGCGTGGTACCGACTGCACCTACTCCGGTTTGGACGTC	ARGLGYWRGTDCTYSGLDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	288	269	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  S  F  S  D  D
                    Query_9812   1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCAGTTTCAGCGACGA  90
V  93.4% (269/288)  IGHV1-69*01  6    .............................................................................CC......AG.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  L  I  P  I  F  G  I  L  N  Y  A  Q
                    Query_9812   91   TGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCCTCATCCCTATCTTTGGTATATTAAACTACGCACA  180
V  93.4% (269/288)  IGHV1-69*01  96   ........G.............................................GA..................C.GC............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  S  V  D  E  S  T  S  T  T  Y  M  E  L  S  S  L  R  S  D  D  T  A
                    Query_9812   181  GAAATTCCAGGGCAGAGTCACGATTTCCGTGGACGAGTCCACGAGCACAACCTACATGGAGCTGAGCAGCCTGAGATCTGACGACACGGC  270
V  93.4% (269/288)  IGHV1-69*01  186  ...G.....................A...C......A............G...............................G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        V  Y  F  C  A  R  G  L  G  Y  W  R  G  T  D  C  T  Y  S  G  L  D  V  W  G  Q  G  T  T  V
                    Query_9812   271  CGTGTATTTCTGTGCAAGGGGACTAGGATATTGGCGTGGTACCGACTGCACCTACTCCGGTTTGGACGTCTGGGGCCAGGGGACCACGGT  360
V  93.4% (269/288)  IGHV1-69*01  276  ........A......G..------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  84.2% (16/19)    IGHD2-2*01   1    ------------------------.........TA..A.....-----------------------------------------------  19
J  92.3% (48/52)    IGHJ6*02     11   ---------------------------------------------------.....A....A................A...........  49

                                                   
                                        I  V  S  S 
                    Query_9812   361  CATCGTCTCCTCA  373
J  92.3% (48/52)    IGHJ6*02     50   ..C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_258475

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           333     1e-93
IGHD3-3*01                                                                                            21.8    0.042
IGHJ5*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGATGGGGAAGGG	ACGATTTTTGG	GATGGGGTGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGATGGGGAAGGGACGATTTTTGGGATGGGGTGAGGTTCGACTCT	ARGRWGRDDFWDGVRFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  S  L  T  G  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9813   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCAGCCTCACAGGCTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-48*03  47   ........................C...........C.T...GTA.T...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  S  G  S  T  R  H  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  A  
                    Query_9813   91   AATGGATTTCATACATCAGTAGTAGTGGCAGTACCAGACATTACGCAGACTCTGTGAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  92.8% (231/249)  IGHV3-48*03  137  .G...G..........T...........T.......T.T.C........................T........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  R  W  G  R  D  D  
                    Query_9813   181  AGAACTCACTATATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGAGGCCGATGGGGAAGGGACGATT  270
V  92.8% (231/249)  IGHV3-48*03  227  ..........G.........................C................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-3*01   6    ------------------------------------------------------------------------------------......  11

                                      IMGT--------------------->                                  
                                      F  W  D  G  V  R  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_9813   271  TTTGGGATGGGGTGAGGTTCGACTCTTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  330
D  100.0% (11/11)   IGHD3-3*01   12   .....-------------------------------------------------------  16
J  93.3% (42/45)    IGHJ5*01     7    ---------------..........C........A....C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_258474

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           397     8e-113
IGHD3-16*01                                                                                           27.6    9e-04 
IGHJ4*01                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCGGTGCCCCTGCTTTGGAG	TATGATAATGTTTGGGGGAG	AGTTCAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCGGTGCCCCTGCTTTGGAGTATGATAATGTTTGGGGGAGAGTTCAGTAC	ARLGAPALEYDNVWGRVQY	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_9814   1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTA  90
V  93.8% (272/290)  IGHV5-51*01  6    .........................G............................................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  L  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  Q
                    Query_9814   91   CTGGATCGGCTGGGTGCGCCAACTGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACAAGATACAGACA  180
V  93.8% (272/290)  IGHV5-51*01  96   .....................GA.......................................................C........C.C  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  S  S  I  R  T  T  F  L  Q  W  N  S  L  Q  S  S  D  T  A
                    Query_9814   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGCTCCATCAGAACCACCTTCCTGCAGTGGAATAGTCTGCAGTCCTCGGACACCGC  270
V  93.8% (272/290)  IGHV5-51*01  186  ...................................AG........C...G...A...........GC..C...A..G.............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  L  G  A  P  A  L  E  Y  D  N  V  W  G  R  V  Q  Y  W  G  Q  G  T  L  V
                    Query_9814   271  CATGTATTATTGTGCGAGACTCGGTGCCCCTGCTTTGGAGTATGATAATGTTTGGGGGAGAGTTCAGTACTGGGGCCAAGGAACCCTGGT  360
V  93.8% (272/290)  IGHV5-51*01  276  .........C..........----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  90.0% (18/20)    IGHD3-16*01  5    ----------------------------------------......T.C...........------------------------------  24
J  97.3% (36/37)    IGHJ4*01     12   -------------------------------------------------------------------.......................  34

                                                    
                                        A  V  S  S  
                    Query_9814   361  CGCCGTCTCCTCAG  374
J  97.3% (36/37)    IGHJ4*01     35   .A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_258476

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           402     3e-114
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_9815   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCTTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  94.5% (273/289)  IGHV5-51*03  6    .........................................................C...................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_9815   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  94.5% (273/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  R  S  I  T  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_9815   181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAGGTCCATCACGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  94.5% (273/289)  IGHV5-51*03  186  ...............G...................A........GC...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9815   271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  94.5% (273/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_9815   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_62782

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           313     1e-87
IGHD5-18*01                                                                                           16.1    2.3  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TA	GATACAGTTAT	ATGCCAATTATTCCCGAGAAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATAGATACAGTTATATGCCAATTATTCCCGAGAATTGGTTCGACCTC	ARDRYSYMPIIPENWFDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  W  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_9816   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACATTCAGTAGACACTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGCCTGG  90
V  90.0% (225/250)  IGHV3-74*01  47   .....................................C........CT........................C............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  S  R  I  N  I  D  G  S  K  T  V  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9816   91   CGTGGGTCTCACGCATAAATATAGATGGGAGTAAGACAGTCTACGCGGACTCCGTGAAGGGCCGCTTCACCATCTCAAGAGACAACGCCA  180
V  90.0% (225/250)  IGHV3-74*01  137  T............T..T....GT..........GC...AG........................A...........C.............  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  D  L  Q  M  T  K  V  T  A  E  D  T  A  V  Y  Y  C  A  R  D  R  Y  S  Y  M  P  
                    Query_9816   181  AGAACACGCTGGATCTACAAATGACCAAGGTGACAGCCGAGGACACGGCTGTCTACTACTGTGCAAGAGATAGATACAGTTATATGCCAA  270
V  90.0% (225/250)  IGHV3-74*01  227  ...........T....G.......A..GTC...G..................G..T..............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD5-18*01  4    ------------------------------------------------------------------------.......C...-------  14

                                      IMGT--------------------->                                  
                                      I  I  P  E  N  W  F  D  L  W  G  Q  G  A  L  V  I  V  S  S  
                    Query_9816   271  TTATTCCCGAGAATTGGTTCGACCTCTGGGGCCAGGGAGCCCTGGTCATCGTCTCCTCAG  330
J  93.5% (43/46)    IGHJ5*02     6    --------------..........C.............A.........C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_290560

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            389     2e-110
IGHD6-19*01                                                                                           21.8    0.045 
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACC	GGGTGTAGCAATGGCTG	ATTTATC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAACCGGGTGTAGCAATGGCTGATTTATCCTATTACTACGGTCTGGACGTC	AREPGVAMADLSYYYGLDV	269	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	154	27	25	2	0	92.6
FR3-IMGT	155	268	114	110	4	0	96.5
CDR3-IMGT (germline)	269	276	8	8	0	0	100
Total	N/A	N/A	275	262	13	0	95.3


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  I  S  R  N  T  D  A  W  N  W  I  R 
                    Query_9817   2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTATCTCTCGCAACACTGATGCTTGGAACTGGATCAGG  91
V  95.3% (262/275)  IGHV6-1*01   31   ........G...T.G.......................................G.....A......G..C...................  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  K  S  K  W  Y  Y  D  Y  A  V  S  V  K  S  R 
                    Query_9817   92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAAGTCCAAGTGGTATTATGATTATGCAGTATCTGTGAAAAGTCGA  181
V  95.3% (262/275)  IGHV6-1*01   121  ..............................................G.............A.............................  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  H  L  S  S  V  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_9817   182  ATTACCATCAACCCCGACACATCCAAGAACCAGTTCTCCCTGCATCTGAGCTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCA  271
V  95.3% (262/275)  IGHV6-1*01   211  ..A...........A.............................G....A........................................  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      ---------------------CDR3-IMGT----------------------->                                 
                                       R  E  P  G  V  A  M  A  D  L  S  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9817   272  AGAGAACCGGGTGTAGCAATGGCTGATTTATCCTATTACTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  358
V  95.3% (262/275)  IGHV6-1*01   301  .....----------------------------------------------------------------------------------  305
                                       R                                                                                     
D  88.2% (15/17)    IGHD6-19*01  1    --------....A.....G......--------------------------------------------------------------  17
J  96.4% (53/55)    IGHJ6*02     8    --------------------------------...C.........A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_51385

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           357     1e-100
IGHD3-3*01                                                                                            21.8    0.041 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGCCTCGTGCCTG	GGAGTGGTTAT	GAAGCCATACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGCCTCGTGCCTGGGAGTGGTTATGAAGCCATACCTGACTAC	AKSLVPGSGYEAIPDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9818   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTTAGCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-23*01  47   ......................................T..................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  D  T  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9818   91   AATGGGTCTCAGGTATTAGTGGTAGTGGTGGTGACACATACTACGCAGACGCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (238/248)  IGHV3-23*01  137  .G..........C...................AG................T.......................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  F  C  A  K  S  L  V  P  G  S  G  
                    Query_9818   181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTATATTTCTGTGCGAAAAGCCTCGTGCCTGGGAGTGGTT  270
V  96.0% (238/248)  IGHV3-23*01  227  ...A................................C....................A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD3-3*01   15   ---------------------------------------------------------------------------------.........  23

                                      T------------------>                                
                                      Y  E  A  I  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9818   271  ATGAAGCCATACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  322
D  100.0% (11/11)   IGHD3-3*01   24   ..--------------------------------------------------  25
J  100.0% (39/39)   IGHJ4*02     8    -------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_99957

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           366     2e-103
IGHD4-17*01                                                                                           18.0    0.58  
IGHJ3*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-17*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AAA	GACTACATTGACTAC	GAATT	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGAAAAGACTACATTGACTACGAATTATGCTTTTGATGTC	AKEKTTLTTNYAFDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9819   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-30*18  47   .......................................................G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  E  N  Y  K  Y  Y  A  D  S  V  K  G  R  I  T  I  S  R  D  N  S  
                    Query_9819   91   AGTGGGTGGCAGTTATATCATATGATGAAAATTATAAGTACTATGCAGACTCCGTGAAGGGCCGAATCACCATCTCCAGAGACAATTCCA  180
V  96.8% (242/250)  IGHV3-30*18  137  ...........................G..G.A....A...........................T........................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  E  K  T  T  L  T  T  
                    Query_9819   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTATATTACTGTGCCAAAGAAAAGACTACATTGACTACGA  270
V  96.8% (242/250)  IGHV3-30*18  227  ....................................................G...........G.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  86.7% (13/15)    IGHD4-17*01  2    -------------------------------------------------------------------------......GG.......--  16

                                      ---------------->                                  
                                      N  Y  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9819   271  ATTATGCTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  100.0% (48/48)   IGHJ3*01     3    ---................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_220032

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           336     1e-94
IGHD2-15*01                                                                                           35.3    4e-06
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GGGGC	TATTGTAGTGGTGGTATGTGCTAC	ACCCCCGT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGGGGCTATTGTAGTGGTGGTATGTGCTACACCCCCGTCTACTACTACTCCGGTATGGACGTC	AKGGYCSGGMCYTPVYYYSGMDV	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	49	2	0	96.1
CDR2-IMGT	100	123	24	23	1	0	95.8
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	231	223	8	0	96.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  P  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  P  V  W  V  S  R  I  
                    Query_9820   14   GTGCAGCCTCTGGATTCCCCTTCAGTACCTACTGGATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGGTGTGGGTCTCACGTATCA  103
V  96.5% (223/231)  IGHV3-74*01  65   .................A.........G........................A................T..................T.  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  
                    Query_9820   104  ATAGTGATGGGAGTAGCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACCCTGTATCTGC  193
V  96.5% (223/231)  IGHV3-74*01  155  .....................G.........................................................G..........  244
                                      N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------------------CDR3-IMGT-------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  G  Y  C  S  G  G  M  C  Y  T  P  V  
                    Query_9820   194  AAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAAAGGGGGCTATTGTAGTGGTGGTATGTGCTACACCCCCGTCT  283
V  96.5% (223/231)  IGHV3-74*01  245  ................................................G..---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  91.7% (22/24)    IGHD2-15*01  5    --------------------------------------------------------................GC......----------  28
J  96.6% (56/58)    IGHJ6*02     5    ----------------------------------------------------------------------------------------..  6

                                      ---------------------->                                 
                                      Y  Y  Y  S  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_9820   284  ACTACTACTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  339
J  96.6% (56/58)    IGHJ6*02     7    .........A...................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_220033

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           313     1e-87
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGACTAG	TGGAACGAC	TCTTGTGT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGACTAGTGGAACGACTCTTGTGTACTGGTTCGACCCC	ARTSGTTLVYWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	220	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  N  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  Q  L  E 
                    Query_9821   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAATACCTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAACAACTGGAG  90
V  91.7% (220/240)  IGHV4-59*08  49   ..................A.....................G..GT...................................GGG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  T  T  Y  S  P  S  L  K  S  R  V  T  M  S  I  D  T  S  K  N 
                    Query_9821   91   TGGATTGGTTATATCTCTTACAGTGGGAGCACCACTTATAGCCCCTCCCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCCAAGAAC  180
V  91.7% (220/240)  IGHV4-59*08  139  ........G.......A.................AC..C.A...........................A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  T  S  G  T  T  L  V  Y  W 
                    Query_9821   181  CAGTTCTCCCTGAGGCTGACGTCTGTGACCGCCGCAGACACGGCCATTTATTACTGTGCGCGGACTAGTGGAACGACTCTTGTGTACTGG  270
V  91.7% (220/240)  IGHV4-59*08  229  .............A.....GC........................G.G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD1-1*01   9    --------------------------------------------------------------------.........-------------  17
J  95.8% (46/48)    IGHJ5*02     4    -------------------------------------------------------------------------------------.....  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  I  L  V  A  V  S  S  
                    Query_9821   271  TTCGACCCCTGGGGCCAGGGAATCCTGGTCGCCGTCTCCTCAG  313
J  95.8% (46/48)    IGHJ5*02     9    ......................C.......A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_220034

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           313     1e-87
IGHD3-3*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCCA	GGAGTGG	GCGGACGGACG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCAGGAGTGGGCGGACGGACGCTACTTTGACTAC	ARLQEWADGRYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  E  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_9822   1    ACCCTGTCCCTCACCTGCGAAGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  91.0% (222/244)  IGHV4-59*08  49   ..................ACT...................G........................................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  N  V  S  Y  S  G  R  T  D  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_9822   91   TGGCTTGGGAATGTCTCTTATAGTGGGAGAACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCGAAGAAC  180
V  91.0% (222/244)  IGHV4-59*08  139  ...A.....T..A...A...C........C...A..................................A..............C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  Y  L  K  L  S  S  V  I  A  E  D  T  A  L  Y  Y  C  A  R  L  Q  E  W  A  D  G  R  Y 
                    Query_9822   181  CAATTCTACCTGAAACTGAGCTCTGTGATCGCCGAAGACACGGCCCTCTATTATTGTGCGAGACTCCAGGAGTGGGCGGACGGACGCTAC  270
V  91.0% (222/244)  IGHV4-59*08  229  ..G....C......G.............C.....C..........G.G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------------------------------------------------------------....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9822   271  TTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ4*02     6    .....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_220035

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         349     2e-98
IGHD5-12*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGAGGAT	TGGCTACGA	GACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGACCCCCTTTGACCTC	ARAGRIGYETPFDL	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_9823     1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTACTCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  95.1% (235/247)  IGHV4-38-2*02  49   ................................................T.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K 
                    Query_9823     91   GAGTGGATTGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAG  180
V  95.1% (235/247)  IGHV4-38-2*02  139  ......................A.........C.........A..............A........................C.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  Q  F  S  L  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  T 
                    Query_9823     181  AACCAGTTCTCGTTGAATCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGAGCGGGGAGGATTGGCTACGAGACC  270
V  95.1% (235/247)  IGHV4-38-2*02  229  ...........CC....G....G...........C...............G................-----------------------  295
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD5-12*01    11   -----------------------------------------------------------------------------.........----  19

                                        ----------->                                  
                                         P  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9823     271  CCCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.5% (42/44)    IGHJ4*02       5    --.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_204148

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           329     3e-92
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCG	ACGGTGAC	ACCGAGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACGGTGACACCGAGAATGACTAC	AADGDTENDY	241	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	22	4	0	84.6
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	126	24	23	1	0	95.8
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	242	226	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  L  T  F  S  S  F  G  M  H  W  V  R  Q  P  P  G  K  G  L  E  
                    Query_9824   2    CCCTGTCCCTCACCTGTGCAGCGTCTGGACTCACCTTCAGTAGCTTTGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGGAGT  91
V  93.4% (226/242)  IGHV3-33*01  50   .....AGA...T.................T...............A......................G.....................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  A  V  I  W  Y  D  G  S  K  K  Y  Y  T  D  S  V  K  G  R  F  I  I  S  R  D  N  S  K  
                    Query_9824   92   GGGTGGCAGTTATATGGTATGATGGAAGTAAGAAATACTATACAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCAAGA  181
V  93.4% (226/242)  IGHV3-33*01  140  ...............................T.........G........................C.......................  229
                                      W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------CDR3-IMGT---------> 
                                      N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  F  C  A  A  D  G  D  T  E  N  D  Y  
                    Query_9824   182  ACACGTTGTATCTGCAGATGAACAGCCTGAGAGTCGACGACACGGCTGTCTATTTCTGTGCGGCCGACGGTGACACCGAGAATGACTACT  271
V  93.4% (226/242)  IGHV3-33*01  230  .....C..........A................C...G...........G....A.......----------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  100.0% (8/8)     IGHD4-17*01  6    ------------------------------------------------------------------........----------------  13
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9824   272  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (41/41)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_220038

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           363     1e-102
IGHD5-18*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGT	TGGATACAACTATGGTTAC	CCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTTGGATACAACTATGGTTACCCTCACTTTGACTAC	ARGVGYNYGYPHFDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	238	6	0	97.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9825   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.5% (238/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  F  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9825   91   TGGATTGGCTTTATCTATTACACTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGTGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.5% (238/244)  IGHV4-59*01  139  ........G.A...........G......C.............................A..............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  Y  N  Y  G  Y  P 
                    Query_9825   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGGTTGGATACAACTATGGTTACCCT  270
V  97.5% (238/244)  IGHV4-59*01  229  ................................T...............................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD5-18*01  2    --------------------------------------------------------------------........G..........---  20

                                      ----------->                                  
                                       H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9825   271  CACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (45/45)   IGHJ4*02     4    -.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_220039

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           333     1e-93
IGHD3-3*01                                                                                            14.1    8.5  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	CTG	TTTTTGG	CGCAGCGAATGATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCTGTTTTTGGCGCAGCGAATGATAATTACGGTGTGGACGTC	ARAVFGAANDNYGVDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9826   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCAGGTATTGGATACACTGGGTCCGTCAAGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-74*01  47   ...........................................T..C..C.....G...........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  H  I  N  M  D  G  S  S  T  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9826   91   ATTGGGTCTCACATATTAACATGGATGGGAGTAGCACAGCCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.8% (231/249)  IGHV3-74*01  137  TG..........G......T.GT...............AG..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  V  F  G  A  A  N  
                    Query_9826   181  AGAATACCCTGTATCTACAATTGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGAGCTGTTTTTGGCGCAGCGAATG  270
V  92.8% (231/249)  IGHV3-74*01  227  ....C..G........G...A...............................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-3*01   10   ------------------------------------------------------------------------.......-----------  16

                                      T------------------>                                 
                                      D  N  Y  G  V  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9826   271  ATAATTACGGTGTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  97.9% (47/48)    IGHJ6*02     15   -----......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_51382

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           339     1e-95
IGHD1-1*01                                                                                            18.0    0.56 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GTC	TACAACTGG	CGGGAGGGGGCGTTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTCTACAACTGGCGGGAGGGGGCGTTCACTAC	GLQLAGGGVHY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9827   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGCAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.7% (230/243)  IGHV3-33*01  47   ...........................................T.GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  S  N  K  H  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_9827   91   AGTGGGTGGCAATTATATGGTATGATGGAAGTAACAAACACTATGCAGACTCCGTCCAGGGCCGATTCACCATATCCAGAGACAATTCCA  180
V  94.7% (230/243)  IGHV3-33*01  137  ...........G......................T...T................GA................C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  G  L  Q  L  A  G  G  G  V  
                    Query_9827   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCTGTATATTACTGTGGTCTACAACTGGCGGGAGGGGGCGTTC  270
V  94.7% (230/243)  IGHV3-33*01  227  ........C...........................C...G...........G..........---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (9/9)     IGHD1-1*01   3    ------------------------------------------------------------------.........---------------  11

                                      ---->                                  
                                      H  Y  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_9827   271  ACTACAGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.4% (38/39)    IGHJ4*02     10   .....T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_114210

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           392     2e-111
IGHD5-18*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CTGACTCCGC	ACAGCTATGG	CCGCTCTT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACTGACTCCGCACAGCTATGGCCGCTCTTACTTCTTTGAATAC	ARLTPHSYGRSYFFEY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  F  T  N  Y
                    Query_9828   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGGTTTACCAACTA  90
V  93.4% (270/289)  IGHV5-51*03  6    ..............................A...............................................C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  F  P  R  D  S  D  T  T  Y  S  P
                    Query_9828   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTTTCCTCGTGACTCTGACACCACATATAGCCC  180
V  93.4% (270/289)  IGHV5-51*03  96   ................................A..........................A....G..........T....G...C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  K  G  H  V  T  I  S  A  D  D  S  M  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9828   181  GTCCTTCAAAGGCCACGTCACCATCTCAGCCGACGACTCCATGTCCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (270/289)  IGHV5-51*03  186  .......C.......G..................A.G.....CAG.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  L  T  P  H  S  Y  G  R  S  Y  F  F  E  Y  W  G  Q  G  T  L  V  T  V  S
                    Query_9828   271  CGTATATTACTGTGCGCGACTGACTCCGCACAGCTATGGCCGCTCTTACTTCTTTGAATACTGGGGCCAGGGAACCCTGGTCACCGTCTC  360
V  93.4% (270/289)  IGHV5-51*03  276  .A.G............A..-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD5-18*01  7    -----------------------------..........---------------------------------------------------  16
J  95.8% (46/48)    IGHJ4*02     1    -----------------------------------------------...A......C................................  43

                                           
                                        S  
                    Query_9828   361  CTCAG  365
J  95.8% (46/48)    IGHJ4*02     44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_114211

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            352     3e-99
IGHD3-16*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	GGGT	CGTTTGGGG	CG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGGGGTCGTTTGGGGCGC	SRGRLGR	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	236	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9829   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.5% (236/247)  IGHV3-7*03   47   .........................................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  N  Q  D  G  S  E  A  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9829   91   AGTGGGTGGCCATCATAAACCAAGATGGAAGTGAGGCATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  95.5% (236/247)  IGHV3-7*03   137  ............A......G...............AA..........................................A..........  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  S  R  G  R  L  G  R  W  G  
                    Query_9829   181  AGAACTCTCTGTATCTGGAAATGAACAGCCTGAGGGCCGAGGACACGGCCCTGTATTACTGTTCGAGGGGTCGTTTGGGGCGCTGGGGCC  270
V  95.5% (236/247)  IGHV3-7*03   227  .......A.........C................A...............G...........G....-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD3-16*01  13   -----------------------------------------------------------------------.........----------  21
J  94.3% (33/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  T  L  V  P  V  S  T  
                    Query_9829   271  AGGGAACCCTGGTCCCCGTCTCCACAG  297
J  94.3% (33/35)    IGHJ4*02     22   ..............A........T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_114212

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           442     2e-126
IGHD3-22*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              108     9e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCCGT	TGGTTAT	AATTCCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTC	ARAVGYNSDYYYGMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	286	3	0	99


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_9830   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  99.0% (286/289)  IGHV5-51*01  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_9830   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGACC  180
V  99.0% (286/289)  IGHV5-51*01  96   .......................................................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  K  A  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9830   181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACAAGGCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  99.0% (286/289)  IGHV5-51*01  186  ........A............................T....................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        M  Y  Y  C  A  R  A  V  G  Y  N  S  D  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_9830   271  CATGTATTACTGTGCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  99.0% (286/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-22*01  19   ------------------------.......-----------------------------------------------------------  25
J  100.0% (56/56)   IGHJ6*02     7    --------------------------------------....................................................  58

                                          
                                        S 
                    Query_9830   361  CTCA  364
J  100.0% (56/56)   IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_114213

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         397     8e-113
IGHD6-19*01                                                                                           18.0    0.66  
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTG	ATAGTACTGGCTGGT	TTCTGGTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGATAGTACTGGCTGGTTTCTGGTT	ARRDSTGWFLV	299	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	76	72	72	0	0	100
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	298	123	106	8	9	86.2
CDR3-IMGT (germline)	299	304	6	6	0	0	100
Total	N/A	N/A	300	279	12	9	93


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  N 
                    Query_9831     5    GTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAAC  94
V  93.0% (279/300)  IGHV5-10-1*01  4    ........................................................................................G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  D  T  N  Y  S 
                    Query_9831     95   TACTGGATCAGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTGACACCAACTACAGC  184
V  93.0% (279/300)  IGHV5-10-1*01  94   ...........C...............................................................T.T......------  177
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N       

                                        ------------------------------------------------FR3-IMGT----------------------------------
                                         P  Y  S  P  S  L  Q  G  H  V  S  F  S  V  D  K  T  I  S  T  A  Y  L  Q  W  S  S  L  K  A 
                    Query_9831     185  CCGTACAGCCCGTCCCTCCAGGGCCACGTCAGCTTCTCAGTCGACAAGACCATCAGCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCC  274
V  93.0% (279/300)  IGHV5-10-1*01  178  ---............T....A..........C.A......CT......T.........................................  264
                                            Y  S  P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A 

                                        -----------------------><-----------CDR3-IMGT----------->                                 
                                         S  D  T  A  I  Y  Y  C  A  R  R  D  S  T  G  W  F  L  V  W  G  Q  G  T  L  V  T  V  S  P 
                    Query_9831     275  TCGGACACCGCCATTTATTACTGTGCGAGACGTGATAGTACTGGCTGGTTTCTGGTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCA  364
V  93.0% (279/300)  IGHV5-10-1*01  265  ..............G...............------------------------------------------------------------  294
                                         S  D  T  A  M  Y  Y  C  A  R                                                             
D  86.7% (13/15)    IGHD6-19*01    5    ----------------------------------....C.G........-----------------------------------------  19
J  97.1% (33/34)    IGHJ4*02       15   ---------------------------------------------------------..............................T..  47

                                         
                                         
                    Query_9831     365  G  365
J  97.1% (33/34)    IGHJ4*02       48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_114214

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           341     5e-96
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	C	TATAGCAGTGGCTGG	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGACTATAGCAGTGGCTGGTACTTTGACTAC	ARDYSSGWYFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  I  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_9832   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTACTTTCAGTAGCTACTGGATACACTGGGTCCGCCAAGCTCCAGGAAGGGGGCTGG  90
V  93.6% (234/250)  IGHV3-74*01  47   ..................................C..C.................G.......................G.A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  I  T  R  D  E  I  G  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9832   91   AGTGGGTCTCACGTATTACTAGAGATGAGATTGGCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.6% (234/250)  IGHV3-74*01  137  T.................A...T....G..G.A......G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  S  S  G  W  Y  
                    Query_9832   181  AGAATACGGTGTATCTGCAAATGAACAGTCTCAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGGGACTATAGCAGTGGCTGGTACT  270
V  93.6% (234/250)  IGHV3-74*01  227  ....C...C......................G...................................A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD6-19*01  4    -----------------------------------------------------------------------...............----  18
J  97.8% (45/46)    IGHJ4*02     3    --------------------------------------------------------------------------------------....  6

                                      ------->                                  
                                      F  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9832   271  TTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.8% (45/46)    IGHJ4*02     7    ...............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_229518

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           371     7e-105
IGHD3-3*01                                                                                            19.9    0.17  
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CACACATTCATTTGAAAGTGC	TGGTTATTACACC	TTTTGGTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACACATTCATTTGAAAGTGCTGGTTATTACACCTTTTGGTTC	ATHSFESAGYYTFWF	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	16	8	0	66.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	261	24	0	91.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  L  N  S  H
                    Query_9833   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCCTCAACAGCCA  90
V  91.6% (261/285)  IGHV1-69*06  6    ..................G............................................................T...G....T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  V  S  N  T  G  D  Y  A  Q
                    Query_9833   91   TGGCATCAGTTGGGTGCGACAGGCCCCCGGGCAAGGGCTTGAGTGGATGGGAGGGATCATTCCTGTTTCGAATACAGGAGACTACGCACA  180
V  91.6% (261/285)  IGHV1-69*06  96   ..CT.....C.................T..A.............................C...A.C.TTGG.....C.A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  K  P  D  D  T  A
                    Query_9833   181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAAACCTGACGACACGGC  270
V  91.6% (261/285)  IGHV1-69*06  186  ..........................................................................G.T....G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  F  C  A  T  H  S  F  E  S  A  G  Y  Y  T  F  W  F  W  G  Q  G  T  R  V  T  V  S  S
                    Query_9833   271  CGTATATTTTTGTGCCACACATTCATTTGAAAGTGCTGGTTATTACACCTTTTGGTTCTGGGGCCAGGGAACCCGGGTCACCGTCTCCTC  360
V  91.6% (261/285)  IGHV1-69*06  276  ...G....AC.....---------------------------------------------------------------------------  290
                                        V  Y  Y  C  A                                                                           
D  92.3% (12/13)    IGHD3-3*01   19   ------------------------------------.........T...-----------------------------------------  31
J  97.1% (34/35)    IGHJ4*02     14   ---------------------------------------------------------.................T...............  46

                                        
                                        
                    Query_9833   361  AG  362
J  97.1% (34/35)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_114217

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           339     2e-95
IGHD1-1*01                                                                                            10.3    123  
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGGGAAACGTAGGGATGCC	TACAA	TCGTC	GATGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGAAACGTAGGGATGCCTACAATCGTCGATGTTTTTGATGTC	ARMGNVGMPTIVDVFDV	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9834   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  93.6% (233/249)  IGHV4-31*03  49   ...................C.....................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Q  I  Y  H  T  G  S  S  D  Y  S  P  S  L  K  S  R  L  T  I  A  V  D  T  S 
                    Query_9834   91   CTGGAGTGGATCGGGCAAATCTATCACACTGGGAGCAGCGACTACAGCCCGTCCCTCAAGAGTCGACTTACCATAGCTGTAGACACGTCT  180
V  93.6% (233/249)  IGHV4-31*03  139  ...........T...T.C......T...G........C.T......A...................G........T.A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  M  G  N  V  G  M  P 
                    Query_9834   181  AAGAACCAGTTCTCCCTGAACCTGAGTTCTGTGACGGCCGCGGACACGGCCGTGTATTACTGTGCGAGAATGGGAAACGTAGGGATGCCT  270
V  93.6% (233/249)  IGHV4-31*03  229  ....................G.....C........T.................................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD1-1*01   3    -----------------------------------------------------------------------------------------.  3

                                      MGT-------------------->                                  
                                       T  I  V  D  V  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9834   271  ACAATCGTCGATGTTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  328
D  100.0% (5/5)     IGHD1-1*01   4    ....------------------------------------------------------  7
J  98.0% (48/49)    IGHJ3*01     2    ---------....C............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_229516

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGGA	N/A	N/A	TCCCC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGATCCCCCTATTACGGTATGGACGTC	AGSPYYGMDV	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9835   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTACTGGATGCACTGGGTCCGCCAAGCTCCCGGGAAGGGGCTGG  90
V  96.4% (239/248)  IGHV3-74*01  47   ..............................................C.............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  F  S  D  V  T  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9835   91   TGTGGGTCTCACGTATTTTTAGTGATGTGACTAGCACAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (239/248)  IGHV3-74*01  137  .................AA........G..G...........................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  G  S  P  Y  Y  G  M  D  
                    Query_9835   181  GGAACACCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAGGATCCCCCTATTACGGTATGGACG  270
V  96.4% (239/248)  IGHV3-74*01  227  A......G.........................................................A..----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  96.2% (50/52)    IGHJ6*02     11   -------------------------------------------------------------------------...C.............  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_9835   271  TCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  305
J  96.2% (50/52)    IGHJ6*02     28   ........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_114219

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     3e-91
IGHD2-15*01                                                                                           10.3    121  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	ATGGCAAGTGAGCCACTGCCT	TATTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAATGGCAAGTGAGCCACTGCCTTATTGCTACTTTGACTCC	AKMASEPLPYCYFDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  I  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9836   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTATCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (228/248)  IGHV3-23*01  47   ....................................C...T..C.G....GC.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  I  S  D  S  G  R  N  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_9836   91   AGTGGGTCTCACTTATTAGTGATAGTGGTAGGAATATATATTATCCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  91.9% (228/248)  IGHV3-23*01  137  ...........GC........G.......G.T.GC.C...C..CG..........................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  M  A  S  E  P  L  P  
                    Query_9836   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAAAATGGCAAGTGAGCCACTGCCTT  270
V  91.9% (228/248)  IGHV3-23*01  227  ........................................G...........................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD2-15*01  5    -----------------------------------------------------------------------------------------.  5

                                      ---------------->                                  
                                      Y  C  Y  F  D  S  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_9836   271  ATTGCTACTTTGACTCCTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTCAG  321
D  100.0% (5/5)     IGHD2-15*01  6    ....-----------------------------------------------  9
J  95.7% (45/47)    IGHJ4*02     2    ----...........A..............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_229515

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           358     4e-101
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCGTGCTGTTA	ACTATGATAGTGGTG	ATTCCGGTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CGTGCTGTTAACTATGATAGTGGTGATTCCGGTTGGTACTTTGACTAC	RAVNYDSGDSGWYFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	241	113	110	3	0	97.3
Total	N/A	N/A	241	235	6	0	97.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9837   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.5% (235/241)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9837   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.5% (235/241)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  R  A  V  N  Y  D  S  G  D  
                    Query_9837   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTGTATTACTGCCGTGCTGTTAACTATGATAGTGGTGATT  270
V  97.5% (235/241)  IGHV3-33*01  227  ........C.......................A............................-----------------------------  287
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                
D  93.3% (14/15)    IGHD3-22*01  6    ------------------------------------------------------------------------...........A...---  20

                                      T------------------>                                  
                                      S  G  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9837   271  CCGGTTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (46/46)   IGHJ4*02     3    --------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_229512

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           210     1e-56
IGHD3-16*01                                                                                           25.7    0.003
IGHJ3*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACCTAT	GTTTGGGGGAGTT	TACGCCGCAATCACGATTGCCTTAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACCTATGTTTGGGGGAGTTTACGCCGCAATCACGATTGCCTTACTGTC	ARGLLIEDPTYVWGSLRRNHDCLTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	35	16	0	68.6
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	87	27	0	76.3
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	189	55	0	77.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  V  R  Q  P  P  G  G  G  L  Q 
                    Query_9838   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGAACTTACTACTGGCACTGGGTGCGGCAACCTCCAGGGGGGGGTCTGCAG  90
V  77.5% (189/244)  IGHV4-59*01  49   .......................C.......G.......A.T.G..........AG....A.C.....G..C......AA...A...G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  A  M  F  L  S  A  G  T  T  L  Y  N  P  S  V  R  G  R  V  T  V  S  G  D  M  S  R  N 
                    Query_9838   91   TGGCTTGCCATGTTCTTATCCGCTGGGACCACCCTCTACAACCCCTCCGTCAGGGGTCGTGTCACCGTGTCGGGCGACATGTCTCGGAAT  180
V  77.5% (189/244)  IGHV4-59*01  139  ...A...GGTATA...AT.A.AG.....G....AA.............C...A.A....A......A.A..A.TA....C...CAA...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_9838   181  CAGTTGTCCCTCAACCTCATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACCTAT  270
V  77.5% (189/244)  IGHV4-59*01  229  .....C.....G..G..G.G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  L  R  R  N  H  D  C  L  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_9838   271  GTTTGGGGGAGTTTACGCCGCAATCACGATTGCCTTACTGTCTGGGGCCAGGGGACACCGGTCACCGTCTCTTCAG  346
D  100.0% (13/13)   IGHD3-16*01  14   .............---------------------------------------------------------------  26
J  92.1% (35/38)    IGHJ3*01     13   --------------------------------------............A......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_229513

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           416     2e-118
IGHD7-27*01                                                                                           14.1    10    
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTCTCTACAGAACCGTCCTATGGGACA	CTAACTG	TGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCC	ARDPFSTEPSYGTLTVRFDP	291	350	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	281	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_9839   3    CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGCTACACCTTTACC  92
V  94.9% (281/296)  IGHV1-18*01  1    .....T.....G...........A.....................................................T............  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  P  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  D  T  N  Y 
                    Query_9839   93   AACTATCCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTGACACAAATTAT  182
V  94.9% (281/296)  IGHV1-18*01  91   .G....GG..........................................................G...........A.......C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  D  L  R  S  L  T  S  D  D 
                    Query_9839   183  GCACAGAAGTTCCAGGGCAGAGTCACCTTGACCACAGACACGTCCACGAGCACAGCCTACATGGACCTGAGGAGCCTGACATCTGACGAC  272
V  94.9% (281/296)  IGHV1-18*01  181  .........C.................A.............A.......................G.............G..........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  V  Y  Y  C  A  R  D  P  F  S  T  E  P  S  Y  G  T  L  T  V  R  F  D  P  W  G  Q  G 
                    Query_9839   273  ACGGCCGTGTATTACTGTGCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCCTGGGGCCAGGGA  362
V  94.9% (281/296)  IGHV1-18*01  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD7-27*01  1    ---------------------------------------------------------.......--------------------------  7
J  97.8% (44/45)    IGHJ5*02     7    -------------------------------------------------------------------.......................  29

                                                            
                                       T  L  V  T  V  S  T  
                    Query_9839   363  ACCCTGGTCACCGTCTCCACAG  384
J  97.8% (44/45)    IGHJ5*02     30   ..................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_229511

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           319     2e-89
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGTCCCGACTGAACTACGGCATGGACGTC	ARLMSRLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  A  S  G  V  S  I  S  N  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_9840   1    ACCCTGTCCCTCACCTGCTCTGCCTCTGGTGTCTCCATCAGCAATTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  91.8% (224/244)  IGHV4-59*08  49   ..................A...T........G.........T.G................A............................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9840   91   TGGATTGAGTACATCTATTACAGGGGGAGTCCCAATAACGACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  91.8% (224/244)  IGHV4-59*08  139  .......G...T...........T.....CA....CT..A..................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_9840   181  CAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTAATGTCCCGACTGAACTACGGCATG  270
V  91.8% (224/244)  IGHV4-59*08  229  .............A.C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  96.0% (48/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9840   271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  309
J  96.0% (48/50)    IGHJ6*02     24   ...................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_174304

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     2e-90
IGHD6-19*01                                                                                           19.9    0.16 
IGHJ1*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	TTCCTCGGCGA	GTATTGCACTGGCTGG	AACATTTGGGGT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTCCTCGGCGAGTATTGCACTGGCTGGAACATTTGGGGTC	ARGSSASIALAGTFGV	261	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	43	7	0	86
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	47	4	0	92.2
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	99	15	0	86.8
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	237	31	0	88.4


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  S  C  G  V  R  G  G  S  F  S  G  S  Y  W  A  W  I  R  
                    Query_9841   1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCTCTTGCGGTGTCCGTGGTGGGTCCTTCAGTGGCTCTTACTGGGCCTGGATCCGCC  90
V  88.4% (237/268)  IGHV4-34*01  26   ........T.......T..................A.C....C....TA..................T.AC......AG...........  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  P  Q  Y  N  P  S  L  K  S  R  V  S  
                    Query_9841   91   AGCCCCCAGGCAAGGGGCTGGAGTGGATTGGCGAAATCAATCATAGTGGAAGTCCCCAATACAACCCGTCCCTCAAGAGTCGAGTCAGTA  180
V  88.4% (237/268)  IGHV4-34*01  116  ..........G....................G....................CA..A.C............................CC.  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  A  V  D  T  S  N  N  H  L  S  L  R  M  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_9841   181  TCGCAGTGGACACGTCGAACAACCACCTCTCCCTGAGGATGACCTCTGTTACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGTT  270
V  88.4% (237/268)  IGHV4-34*01  206  .AT....A........C..G.....GT.........A.C...G......G......................................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  

                                      ----------CDR3-IMGT------------------>                                  
                                      S  S  A  S  I  A  L  A  G  T  F  G  V  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_9841   271  CCTCGGCGAGTATTGCACTGGCTGGAACATTTGGGGTCTGGGGCCAGGGCACCCTAGTCACCGTCTCCGCAG  342
D  87.5% (14/16)    IGHD6-19*01  3    ---------....A...G.......-----------------------------------------------  18
J  94.3% (33/35)    IGHJ1*01     18   -------------------------------------..................G............T...  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_204146

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD2-21*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGGGGG	ATTGTGATGGT	ATTAACTGCTTCCCCTGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGGATTGTGATGGTATTAACTGCTTCCCCTGGTACTACTATTATGGAATGCACGTC	AKGDCDGINCFPWYYYYGMHV	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	221	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  L  Y  G  G  S  F  S  G  H  Y  W  I  W  L  R  Q  S  P  G  K  G  L  E 
                    Query_9842   1    ACCCTGTCCCTCACCTGCGCTCTCTATGGTGGGTCCTTCAGTGGTCACTACTGGATTTGGCTCCGCCAGTCCCCCGGGAAGGGGCTGGAG  90
V  91.7% (221/241)  IGHV4-34*01  49   .....................G.......................T.........GC...A........C....A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  K  Y  N  S  S  L  K  S  R  V  A  M  S  I  D  A  S  K  S 
                    Query_9842   91   TGGATTGGGGAAATCAATCATAGTGGAAGCACGAAGTACAACTCGTCCCTCAAGAGTCGAGTCGCCATGTCAATAGACGCGTCCAAGAGT  180
V  91.7% (221/241)  IGHV4-34*01  139  ................................C..C......C....................A....A...G.....A.........AC  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  Y  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  G  D  C  D  G  I  N  C  F 
                    Query_9842   181  CAATTCTACCTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAAGGGGGATTGTGATGGTATTAACTGCTTC  270
V  91.7% (221/241)  IGHV4-34*01  229  ..G....C...........G...........................G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (10/11)    IGHD2-21*01  6    -------------------------------------------------------------------......G....------------  16

                                      MGT-------------------------->                                 
                                       P  W  Y  Y  Y  Y  G  M  H  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_9842   271  CCCTGGTACTACTATTATGGAATGCACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  333
J  91.2% (52/57)    IGHJ6*02     6    ------........C..C..T...G...........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_202969

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           358     4e-101
IGHD3-22*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCACCGATCC	TATAACGATGATAGTAGTGGTTA	CC	ACTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCACCGATCCTATAACGATGATAGTAGTGGTTACCACTTGGACTAT	ARAHRSYNDDSSGYHLDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9843   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAGTTATGAGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGTTGG  90
V  96.0% (239/249)  IGHV3-48*03  47   ...........................................T........A.................................C...  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  G  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9843   91   AGTGGGTTTCATACATTAGTAGTAGTGGTAGTGGCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (239/249)  IGHV3-48*03  137  ................................AC........................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  T  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  I  Y  F  C  A  R  A  H  R  S  Y  N  D  
                    Query_9843   181  AGACGTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTATTTATTTCTGTGCGAGAGCCCACCGATCCTATAACGATG  270
V  96.0% (239/249)  IGHV3-48*03  227  ...AC...................................G.........G......A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.3% (21/23)    IGHD3-22*01  2    --------------------------------------------------------------------------------...T..T...  11

                                      IMGT--------------------->                                  
                                      D  S  S  G  Y  H  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9843   271  ATAGTAGTGGTTACCACTTGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  330
D  91.3% (21/23)    IGHD3-22*01  12   .............-----------------------------------------------  24
J  93.3% (42/45)    IGHJ4*02     4    ---------------....T.....C.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_49376

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           308     4e-86
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              48.8    7e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	ACTATGGCAGTAGT	TGGTTCGGTTTG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCACTATGGCAGTAGTTGGTTCGGTTTGGACTCC	ARDHYGSSWFGLDS	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	224	27	0	89.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  R  G  S  G  Q  Y  W  T  W  V  R  Q  P  P  G  K  G 
                    Query_9844   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGGGGTAGTGGTCAGTACTGGACCTGGGTCCGCCAGCCCCCAGGGAAGGGC  90
V  89.2% (224/251)  IGHV4-31*03  49   ....................................A....CA..G.....T.C.......G....A.........A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  T  G  I  T  Y  Y  N  P  S  L  K  S  R  L  V  I  S  V  D  T  S 
                    Query_9844   91   CTGGAATGGATTGGTTACATCTATTACACTGGGATCACCTACTACAACCCGTCCCTCAAGAGTCGACTTGTCATCTCAGTCGACACTTCT  180
V  89.2% (224/251)  IGHV4-31*03  139  .....G........G.............G.....G...............................G..AC...A.....A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       N  N  Q  F  F  V  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  H  Y  G  S  S  W 
                    Query_9844   181  AACAACCAGTTTTTTGTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCATTTATTACTGTGCGAGAGATCACTATGGCAGTAGTTGG  270
V  89.2% (224/251)  IGHV4-31*03  229  ..G........C.CCC...A...............................G.G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  85.7% (12/14)    IGHD3-22*01  6    -------------------------------------------------------------------------......AT......---  19

                                      -------------->                                  
                                       F  G  L  D  S  W  G  Q  G  K  L  V  T  V  S  S  
                    Query_9844   271  TTCGGTTTGGACTCCTGGGGCCAGGGAAAGCTGGTAACCGTCTCGTCAG  319
J  87.5% (35/40)    IGHJ4*02     9    ---------....A..............CC.....C........C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_344879

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           10.3    132   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_9845   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  95.2% (276/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  F  A  Q 
                    Query_9845   92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTTTGCACAG  181
V  95.2% (276/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_9845   182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  R  G  I  L  V  T  V  S  S  
                    Query_9845   272  ATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCGGGGAATCCTGGTCACCGTCTCCTCAG  350
V  95.2% (276/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  95.7% (45/47)    IGHJ4*02     2    --------------------------------....................A.....C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_344878

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           419     2e-119
IGHD1-26*01                                                                                           10.3    137   
IGHJ5*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	GGAGC	ACATCAATGCCTCGGACGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGATCGGAGCACATCAATGCCTCGGACGGACTGGTGCGACACC	GRDRSTSMPRTDWCDT	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_9846   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACGTTTACCAGTTAT  91
V  96.2% (279/290)  IGHV1-18*01  7    .............................................................................C........C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  T  Y  N  G  D  T  N  Y  A  Q 
                    Query_9846   92   GGTATCAGCTGGGTGCGCCAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCACTTACAATGGTGACACAAACTATGCACAG  181
V  96.2% (279/290)  IGHV1-18*01  97   .................A................................A.........G...........A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  E  V  R  S  L  R  S  D  D  T  A 
                    Query_9846   182  AAGTTCCAGGGCAGAGTCACCCTGACCACAGACACATCCACGAGCACAGCCTACATGGAGGTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.2% (279/290)  IGHV1-18*01  187  ...C.................A......................................C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  G  R  D  R  S  T  S  M  P  R  T  D  W  C  D  T  W  G  E  G  T  L  V  T  V  S 
                    Query_9846   272  GTGTATTATTGTGGGAGAGATCGGAGCACATCAATGCCTCGGACGGACTGGTGCGACACCTGGGGCGAGGGAACCCTGGTCACCGTCTCC  361
V  96.2% (279/290)  IGHV1-18*01  277  ........C....C......----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (5/5)     IGHD1-26*01  10   ----------------------.....---------------------------------------------------------------  14
J  93.6% (44/47)    IGHJ5*02     4    ----------------------------------------------......T....C........C.......................  47

                                         
                                       S 
                    Query_9846   362  TCA  364
J  93.6% (44/47)    IGHJ5*02     48   ...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_49373

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_9847   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTA  90
V  97.6% (282/289)  IGHV5-51*03  6    ..............................................................................C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_9847   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  97.6% (282/289)  IGHV5-51*03  96   .......................................................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9847   181  GTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  ........................C....C....A..................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9847   271  CATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  97.6% (282/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (15/15)   IGHD6-19*01  4    ----------------------------------...............----------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   ----------------------------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_49372

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           433     1e-123
IGHD3-10*01                                                                                           12.2    36    
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTCAATT	TGGTTC	CGCAAACGG	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTCAATTTGGTTCCGCAAACGGCTACCAGTACGGCATGGACGTC	ARFQFGSANGYQYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  P  H  Y
                    Query_9848   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTAAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTCCCCACTA  90
V  97.9% (283/289)  IGHV5-51*03  6    ................................................G.................................A..AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  S  P
                    Query_9848   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACAGCCC  180
V  97.9% (283/289)  IGHV5-51*03  96   .................................................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9848   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (283/289)  IGHV5-51*03  186  ............................................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  F  Q  F  G  S  A  N  G  Y  Q  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_9848   271  CATGTATTACTGTGCGAGATTTCAATTTGGTTCCGCAAACGGCTACCAGTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  97.9% (283/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-10*01  10   ---------------------------......---------------------------------------------------------  15
J  94.5% (52/55)    IGHJ6*02     8    ------------------------------------------....T.C.....T...................................  55

                                             
                                        S  S 
                    Query_9848   361  CTCCTCA  367
J  94.5% (52/55)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_49371

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	100	14	0	87.7
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9849  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.0% (214/246)  IGHV4-4*01  49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  A  T  I  S  V  D  K  P  R 
                    Query_9849  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGCCACCATATCAGTAGACAAGCCCAGA  180
V  87.0% (214/246)  IGHV4-4*01  139  ..............A...T.....A.T..GAG............C.........A.........T...................T...AG  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                      N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_9849  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.0% (214/246)  IGHV4-4*01  229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01  13   ----------------------------------------------------------------------.....C..G...--------  24

                                     ----------->                                  
                                      G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_9849  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02    6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_49370

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           349     3e-98
IGHD2-15*01                                                                                           39.1    3e-07
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	T	GGATATTGTCGTGGTGGTGCCTGCTACTC	AACGGGTCGGGGGACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGATATTGTCGTGGTGGTGCCTGCTACTCAACGGGTCGGGGGACTTTTGACTAC	ARHGYCRGGACYSTGRGTFDY	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  S  T  H  H  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9850   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGACTCCATCAGCAGCAGTACTCACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.4% (237/251)  IGHV4-39*01  49   .............................T.G............T....G.T..T...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  V  Y  Y  S  G  R  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9850   91   CTGGAGTGGATTGGGAGTGTCTATTATAGTGGGAGAACCTACGACAACCCGTCTCTCAAGAGTCGAGTCACCATATCTGTCGACACGTCC  180
V  94.4% (237/251)  IGHV4-39*01  139  ..................A................C......T..........C.......................C..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  H  G  Y  C  R  G  G 
                    Query_9850   181  AAGAATCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTTTTACTGTGCGAGACATGGATATTGTCGTGGTGGT  270
V  94.4% (237/251)  IGHV4-39*01  229  .....C.................................................A...............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.7% (26/29)    IGHD2-15*01  2    ------------------------------------------------------------------------.........A........  19

                                      CDR3-IMGT-------------------------->                                  
                                       A  C  Y  S  T  G  R  G  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9850   271  GCCTGCTACTCAACGGGTCGGGGGACTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  89.7% (26/29)    IGHD2-15*01  20   AG.........-----------------------------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_70904

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           324     8e-91
IGHD6-19*01                                                                                           18.0    0.60 
IGHJ2*01                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAA	CAGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAACAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQQWLPGDWYFDL	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  R  N  Y  W  S  W  I  R  Q  P  P  G  E  R  L  E 
                    Query_9851   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCACTAGAAACTACTGGAGCTGGATCCGGCAGCCCCCAGGTGAGAGACTGGAG  90
V  92.6% (225/243)  IGHV4-59*08  49   ...................C...........G........G...TT...............................GA..G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_9851   91   TGGATTGCATATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  92.6% (225/243)  IGHV4-59*08  139  .......GG......T...........AG...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  F  L  P  A  V  Q  Q  W  L 
                    Query_9851   181  CAGTTCTCCCTGAAGATGACTTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGATTCCTCCCCGCGGTGCAACAGTGGCTG  270
V  92.6% (225/243)  IGHV4-59*08  229  ...............C...GC........................G.................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-19*01  9    ---------------------------------------------------------------------------------.........  17

                                      ----------------------->                                  
                                       P  G  D  W  Y  F  D  L  W  G  R  G  S  L  V  T  V  S  S  
                    Query_9851   271  CCAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCTCCCTGGTCACTGTCTCCTCAG  328
J  98.0% (50/51)    IGHJ2*01     3    -------.............................A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_70905

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            353     1e-99
IGHD4-17*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AC	ACGGTGACTAC	CGATTC	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAACACGGTGACTACCGATTCTACTACTATTACTACGGACTGGACGTC	VREHGDYRFYYYYYGLDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  A  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9852   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTTAGTGCCTATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-7*03   47   ....................G.......................AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  N  E  K  H  Y  V  G  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9852   91   AATGGGTGGCCAACATAAAACAAGATGGAAATGAGAAACACTATGTGGGCTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-7*03   137  .G.................G..........G.......T.........A...............A.........................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  E  H  G  D  Y  R  F  
                    Query_9852   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGTGAGAGAACACGGTGACTACCGATTCT  270
V  95.2% (238/250)  IGHV3-7*03   227  ....................................................G..........C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD4-17*01  6    ------------------------------------------------------------------------...........-------  16
J  95.0% (57/60)    IGHJ6*02     3    -----------------------------------------------------------------------------------------.  3

                                      IMGT--------------------->                                 
                                      Y  Y  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9852   271  ACTACTATTACTACGGACTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  95.0% (57/60)    IGHJ6*02     4    .......C........TA.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_70906

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-9*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCGGTT	GTATTACGATATCTTG	CGGCGGGGAGG	CTACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGTTGTATTACGATATCTTGCGGCGGGGAGGCTACAACGGTTTGGACGTC	ARGRLYYDILRRGGYNGLDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  V  G  S  F  S  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9853   1    ACCCTGTCCCTCACCTGCGCTGTCTATGTTGGGTCCTTCAGTGATTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (233/245)  IGHV4-34*01  49   ............................G..............G..............................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  N  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9853   91   TGGATTGGCGAAATCAATCATAGTGGATCCAACAGCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  ........G..................AG..C..A.......................................A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  D  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  L  Y  Y  D  I  L  R 
                    Query_9853   181  CAGTTCTCCCTGAAGCTGGACTCCGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCCGGTTGTATTACGATATCTTGCGG  270
V  95.1% (233/245)  IGHV4-34*01  229  ..................AG...T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  93.8% (15/16)    IGHD3-9*01   1    -----------------------------------------------------------------------............T...---  16

                                      GT------------------------>                                 
                                       R  G  G  Y  N  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9853   271  CGGGGAGGCTACAACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
J  96.2% (50/52)    IGHJ6*02     11   --------....T.....A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_70907

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	CTGCGCGG	GATAGTCGTGGTTATCACTAC	GGCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGCGCGGGATAGTCGTGGTTATCACTACGGCCTCTACTTTGACTAC	ARPARDSRGYHYGLYFDY	296	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	106	36	22	2	12	61.1
FR2-IMGT	107	157	51	48	3	0	94.1
CDR2-IMGT	158	181	24	24	0	0	100
FR3-IMGT	182	295	114	114	0	0	100
CDR3-IMGT (germline)	296	302	7	7	0	0	100
Total	N/A	N/A	302	283	7	12	93.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------------CDR1-I
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  F  L  R  I  S  C  K  G  S  G  Y  G  S  G  Y  S
                    Query_9854   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTTTCTGAGGATCTCCTGTAAGGGTTCTGGATACGGTTCTGGGTACAG  90
V  93.7% (283/302)  IGHV5-51*01  6    ............................................C.....A.........................------------..  83
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y              S

                                      MGT------------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------
                                        F  T  S  Y  W  I  G  W  A  R  Q  M  P  G  K  G  L  E  W  I  G  V  I  Y  P  G  D  S  D  T
                    Query_9854   91   CTTTACCAGTTATTGGATCGGCTGGGCGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATAGGGGTCATCTATCCTGGTGACTCTGATAC  180
V  93.7% (283/302)  IGHV5-51*01  84   .........C..C.............T.................................G...A.........................  173
                                        F  T  S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T

                                      ><----------------------------------------------------FR3-IMGT----------------------------
                                        R  Y  S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A
                    Query_9854   181  CAGATACAGCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGC  270
V  93.7% (283/302)  IGHV5-51*01  174  ..........................................................................................  263
                                        R  Y  S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A

                                      ------------------------><----------------------CDR3-IMGT--------------------->           
                                        S  D  T  A  M  Y  Y  C  A  R  P  A  R  D  S  R  G  Y  H  Y  G  L  Y  F  D  Y  W  G  Q  G
                    Query_9854   271  CTCGGACACCGCCATGTATTACTGTGCGAGACCTGCGCGGGATAGTCGTGGTTATCACTACGGCCTCTACTTTGACTACTGGGGCCAGGG  360
V  93.7% (283/302)  IGHV5-51*01  264  ................................----------------------------------------------------------  295
                                        S  D  T  A  M  Y  Y  C  A  R                                                            
D  90.5% (19/21)    IGHD3-22*01  11   ----------------------------------------......A........T.....-----------------------------  31
J  100.0% (47/47)   IGHJ4*02     2    ------------------------------------------------------------------........................  25

                                                             
                                        T  L  V  T  V  S  S  
                    Query_9854   361  AACCCTGGTCACCGTCTCCTCAG  383
J  100.0% (47/47)   IGHJ4*02     26   .......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_70900

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*11                                                                                           383     1e-108
IGHD2-2*01                                                                                            18.0    0.70  
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*11	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCCTCCCGCTTTTGTACTTC	TACCAACTGCTA	CATGGGGGA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCCTCCCGCTTTTGTACTTCTACCAACTGCTACATGGGGGAACAACTGGTTCGACCCC	ARGPPAFVLLPTATWGNNWFDP	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  D  T  F  S  S  Y 
                    Query_9855   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGTAAGGCTTCTGGAGACACCTTCAGCAGCTAT  91
V  92.4% (267/289)  IGHV1-69*11  7    .................G...............................A.........C.............G................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  L  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  T  I  I  P  V  L  G  T  A  N  Y  A  Q 
                    Query_9855   92   GGTCTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTGGAGTGGATGGGAACCATCATCCCTGTCCTTGGTACAGCGAACTACGCACAG  181
V  92.4% (267/289)  IGHV1-69*11  97   .C.A..................................T.............GG.........A.............A............  186
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  T  A  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  F  Q  G  R  L  T  M  T  A  D  L  S  T  S  T  A  Y  M  E  L  R  R  L  R  S  D  D  P  A 
                    Query_9855   182  AGGTTCCAGGGCAGACTCACGATGACCGCGGACCTTTCCACGAGCACAGCCTACATGGAGCTGAGACGCCTAAGATCTGACGACCCGGCC  271
V  92.4% (267/289)  IGHV1-69*11  187  .A.............G.......T.........GAA.............................CA....G........G...A.....  276
                                       K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><----------------------------CDR3-IMGT--------------------------->            
                                       V  Y  Y  C  A  R  G  P  P  A  F  V  L  L  P  T  A  T  W  G  N  N  W  F  D  P  W  G  Q  G 
                    Query_9855   272  GTGTATTACTGTGCGAGAGGTCCTCCCGCTTTTGTACTTCTACCAACTGCTACATGGGGGAACAACTGGTTCGACCCCTGGGGCCAGGGA  361
V  92.4% (267/289)  IGHV1-69*11  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  91.7% (11/12)    IGHD2-2*01   16   ----------------------------------------.....G......--------------------------------------  27
J  94.1% (48/51)    IGHJ5*02     1    -------------------------------------------------------------.............................  29

                                                            
                                       T  L  F  P  F  S  S  
                    Query_9855   362  ACCCTGTTCCCCTTCTCCTCAG  383
J  94.1% (48/51)    IGHJ5*02     30   ......G..A..G.........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_344876

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     3e-91
IGHD2-15*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCG	AGGATATTGTCGCAGTGGTAGCTGC	GTTCCCATTGCGACGGCGTGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAAAGATCGAGGATATTGTCGCAGTGGTAGCTGCGTTCCCATTGCGACGGCGTGGGACTAC	TKDRGYCRSGSCVPIATAWDY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  N  Y  A  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_9856   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACCTTTAGCAACTATGCCCTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-23*01  47   ................................T............G.......A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  A  S  S  G  E  D  T  D  Y  A  A  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_9856   91   AGTGGGTCTCATCTATTGCTAGTAGTGGTGAAGACACAGACTACGCAGCCTCCGTGAGGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.6% (229/250)  IGHV3-23*01  137  ...........G.....AG.G.........GTAG....T.........A........A................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  S  L  Q  M  S  S  L  R  A  E  D  T  A  I  Y  Y  C  T  K  D  R  G  Y  C  R  S  
                    Query_9856   181  AGAATACGCTGTCTCTGCAAATGAGCAGCCTGCGAGCCGAGGACACGGCCATATATTACTGTACGAAAGATCGAGGATATTGTCGCAGTG  270
V  91.6% (229/250)  IGHV3-23*01  227  ....C.......A...........A.......A.................G...........G.......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.0% (22/25)    IGHD2-15*01  1    -------------------------------------------------------------------------..........A.TG...  17

                                      DR3-IMGT-------------------------->                                  
                                      G  S  C  V  P  I  A  T  A  W  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9856   271  GTAGCTGCGTTCCCATTGCGACGGCGTGGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  88.0% (22/25)    IGHD2-15*01  18   ........-------------------------------------------------------------  25
J  100.0% (40/40)   IGHJ4*02     9    -----------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_70902

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           282     3e-78
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGC	GGTATAGTAGTGG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGCGGTATAGTAGTGGCTACTACTACGCTATGGTCGTC	ARPRYSSGYYYAMVV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	214	34	0	86.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  G  D  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9857   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCGGCGACTTTGGCATGCACTGGGTCCGCCAGGCCCCTGGCAAGGGGCTGG  90
V  86.3% (214/248)  IGHV3-30*03  47   ....................................C....A.TAG..A........................T..A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  G  A  I  S  Y  D  G  K  Y  K  F  Y  R  D  S  L  K  G  R  F  T  I  S  R  D  N  F  
                    Query_9857   91   AGTGGGTAGGAGCTATCTCATATGACGGCAAATATAAATTCTATAGAGACTCTCTGAAGGGCCGCTTCACCATCTCCAGAGACAACTTCG  180
V  86.3% (214/248)  IGHV3-30*03  137  .......G.C..T...A........T..A.GTA......A....GC......CG..........A....................T.C.A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  K  T  V  F  L  E  M  K  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  P  R  Y  S  S  G  Y  
                    Query_9857   181  AGAAGACGGTGTTTCTGGAAATGAAGAGTCTGAGACCTGAGGACACGGCTGTCTATTACTGTGCGAGACCGCGGTATAGTAGTGGCTACT  270
V  86.3% (214/248)  IGHV3-30*03  227  ....C...C...A....C.......C..C......G................G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD6-19*01  2    ------------------------------------------------------------------------.......C.....-----  14
J  96.4% (53/55)    IGHJ6*02     8    -------------------------------------------------------------------------------------.....  12

                                      ---------------->                                 
                                      Y  Y  A  M  V  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9857   271  ACTACGCTATGGTCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  96.4% (53/55)    IGHJ6*02     13   ......G.....A.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_70903

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           321     6e-90
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_9858   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_9858   91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_9858   181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.8% (225/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_9858   271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_174302

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD3-16*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_9859   1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (227/249)  IGHV4-61*01  49   .......................C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S 
                    Query_9859   91   CTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  91.2% (227/249)  IGHV4-61*01  139  ....A.........GT............G......CAC..A.........................G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y 
                    Query_9859   181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTAT  270
V  91.2% (227/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------------.....  28

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  I  V  S  T  
                    Query_9859   271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCATCGTCTCTACAG  322
D  100.0% (7/7)     IGHD3-16*02  29   ..--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_202965

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           344     6e-97
IGHD3-10*01                                                                                           46.8    1e-09
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTATGGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATGGTTCGGGGAGTTATTTTGACTTC	ARGLYYYGSGSYFDF	250	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	63	36	29	1	6	80.6
FR2-IMGT	64	114	51	47	4	0	92.2
CDR2-IMGT	115	135	21	21	0	0	100
FR3-IMGT	136	249	114	110	4	0	96.5
CDR3-IMGT (germline)	250	256	7	7	0	0	100
Total	N/A	N/A	256	240	10	6	93.8


Alignments

                                      <--------FR1-IMGT---------><-------------CDR1-IMGT------------><--------------------FR2-IM
                                       T  L  S  L  T  C  T  V  T  V  S  R  G  S  I  S  S  G  G  H  Y  W  N  W  I  R  Q  L  P  G 
                    Query_9860   1    ACCCTGTCCCTCACCTGCACTGTCACTGTCTCTCGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAACTGGATCCGCCAGCTCCCAGGG  90
V  93.8% (240/256)  IGHV4-31*03  49   ........................T...------.......................T.........G..............A.......  132
                                       T  L  S  L  T  C  T  V  S        G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  G  L  Q  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D 
                    Query_9860   91   AAGGGCCTGCAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGAC  180
V  93.8% (240/256)  IGHV4-31*03  133  .........G...........T..........................................................A.........  222
                                       K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-----------------CDR
                                       T  S  K  N  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y 
                    Query_9860   181  ACGTCTAAGAACCAGCTGTCCCTGAAGTTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCTCTATTACTAT  270
V  93.8% (240/256)  IGHV4-31*03  223  ...............T.C.........C................................................--------------  298
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  100.0% (24/24)   IGHD3-10*01  2    ---------------------------------------------------------------------------------.........  10

                                      3-IMGT----------------->                                  
                                       G  S  G  S  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9860   271  GGTTCGGGGAGTTATTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  100.0% (24/24)   IGHD3-10*01  11   ...............-------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_85168

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           428     3e-122
IGHD1-20*01                                                                                           21.8    0.047 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTAAGACAGGGGTCACA	ATAACTGGAAC	AACTTGGGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAAGACAGGGGTCACAATAACTGGAACAACTTGGGGGTACTTTGACTAC	ARLKTGVTITGTTWGYFDY	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	282	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  N  Y
                    Query_9861   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATATAGTTTTAGCAACTA  90
V  97.2% (282/290)  IGHV5-51*01  6    ...........................................................................C..C....C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_9861   91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  97.2% (282/290)  IGHV5-51*01  96   ...................................................G............................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9861   181  GTCCTTCCAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.2% (282/290)  IGHV5-51*01  186  ........................C...................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  L  K  T  G  V  T  I  T  G  T  T  W  G  Y  F  D  Y  W  G  Q  G  T  L  V
                    Query_9861   271  CATGTATTACTGTGCGAGACTTAAGACAGGGGTCACAATAACTGGAACAACTTGGGGGTACTTTGACTACTGGGGCCAGGGAACCCTGGT  360
V  97.2% (282/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (11/11)   IGHD1-20*01  4    -------------------------------------...........------------------------------------------  14
J  97.8% (45/46)    IGHJ4*02     3    ----------------------------------------------------------................................  34

                                                    
                                        T  V  S  S  
                    Query_9861   361  CACCGTTTCCTCAG  374
J  97.8% (45/46)    IGHJ4*02     35   ......C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_204143

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           258     4e-71
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	GCCCACCGGGTG	AGCAATGGCTGG	GGAAGGTACTATAATAAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCCCACCGGGTGAGCAATGGCTGGGGAAGGTACTATAATAATGGTATGGACGCC	ARAHRVSNGWGRYYNNGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	57	30	20	4	6	66.7
FR2-IMGT	58	108	51	43	8	0	84.3
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	209	34	6	83.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  T  A  N  D  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_9862   1    ACCCTGTCCCTCACCTGCGCCGTGTACGGTGGGTCTTTCACTGCCAATGATTATTACTGGAATTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  83.9% (209/249)  IGHV4-34*12  49   ....................T..C..T........C....G..G------...C.......GC...AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G        Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  H  L  G  G  A  K  Y  N  P  S  L  Q  S  R  V  T  I  S  L  D  T  S 
                    Query_9862   91   CTGGAATGGATAGGGGAAATCATTCATCTTGGAGGCGCCAAGTACAACCCGTCCCTCCAGAGTCGAGTTACCATTTCACTAGACACGTCC  180
V  83.9% (209/249)  IGHV4-34*12  133  .....G.....T...............AG....A..A....C...............A..........C.....A...G...........  222
                                       L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  N  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  A  H  R  V  S  N  G 
                    Query_9862   181  AAGAATCAATTCTCCCTGAAATTGAATTCTGTTAGCGCCGCGGACACGGCTGTGTATTATTGTGCAAGAGCCCACCGGGTGAGCAATGGC  270
V  83.9% (209/249)  IGHV4-34*12  223  .....C..G...........GC...GC.....G.C........................C.....G...---------------------  291
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  R  Y  Y  N  N  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_9862   271  TGGGGAAGGTACTATAATAATGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  93.3% (42/45)    IGHJ6*02     18   ---------------------..........T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_2793

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           396     2e-112
IGHD2-21*01                                                                                           12.2    35    
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TT	TTGCTA	ATGCGGGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATTTTGCTAATGCGGGGTTTGACTCC	AKDFANAGFDS	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y
                    Query_9863   1    GCAGCTGGTGCAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGGTA  90
V  93.5% (272/291)  IGHV3-30*18  6    ..........G............................................................................C..  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  D  Y  A  G  V  I  S  H  D  G  S  H  K  Y  Y  A  D
                    Query_9863   91   TGGCATGCATTGGGTCCGCCAGGCGCCAGGCAAGGGGCTGGACTACGCGGGAGTTATATCACACGATGGCAGTCATAAATACTATGCAGA  180
V  93.5% (272/291)  IGHV3-30*18  96   .........C..............T.................G.GG.T..C..........T.T.....A...A................  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A
                    Query_9863   181  CTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTCCAAATGAACAGCCTGAGACCTGAGGACACGGC  270
V  93.5% (272/291)  IGHV3-30*18  186  .........................................................G..................G.............  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  K  D  F  A  N  A  G  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9863   271  TCTATATTATTGTGCAAAAGATTTTGCTAATGCGGGGTTTGACTCCTGGGGCCAGGGAGCCCTTGTCACCGTCTCCTCAG  350
V  93.5% (272/291)  IGHV3-30*18  276  .G.G.....C.....G.....-----------------------------------------------------------  296
                                        V  Y  Y  C  A  K                                                              
D  100.0% (6/6)     IGHD2-21*01  19   -----------------------......---------------------------------------------------  24
J  93.0% (40/43)    IGHJ4*02     6    -------------------------------------.......A.............A....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_125477

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           428     3e-122
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	294	284	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  R  E  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  A  
                    Query_9864   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAGAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTGCCA  91
V  96.6% (284/294)  IGHV5-51*01  2    .................................A.A.............................................G....A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  F  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  H  T  R  Y  
                    Query_9864   92   GCTTCTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTCATACCAGATACA  181
V  96.6% (284/294)  IGHV5-51*01  92   ...A.........................................................................G............  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  
                    Query_9864   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCGCGGACA  271
V  96.6% (284/294)  IGHV5-51*01  182  .............................................................................A.....T......  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_9864   272  CCGCCGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  361
V  96.6% (284/294)  IGHV5-51*01  272  .....A.G................------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD6-19*01  5    --------------------------............----------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_9864   362  CCTCAG  367
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_28405

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     8e-121
IGHD7-27*01                                                                                           18.0    0.66  
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCCGCCGCGGCA	AACTGGGGA	T	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCGCCGCGGCAAACTGGGGATTGATGCTTTTCATATC	ARPRRGKLGIDAFHI	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	73	1	0	98.6
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	282	11	0	96.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_9865   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTCAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  91
V  96.2% (282/293)  IGHV5-51*03  2    ...............................G..........................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  F  I  G  W  V  R  Q  T  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  
                    Query_9865   92   GTTACTTCATCGGCTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACA  181
V  96.2% (282/293)  IGHV5-51*03  92   .C....GG...................T.........................................G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_9865   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  96.2% (282/293)  IGHV5-51*03  182  ................................................G.........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      S  G  I  Y  Y  C  A  R  P  R  R  G  K  L  G  I  D  A  F  H  I  W  G  Q  G  A  M  V  T  V  
                    Query_9865   272  GCGGCATATATTATTGTGCGAGACCCCGCCGCGGCAAACTGGGGATTGATGCTTTTCATATCTGGGGCCAAGGGGCAATGGTCACCGTCT  361
V  96.2% (282/293)  IGHV5-51*03  272  C..C...G.....C.........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (9/9)     IGHD7-27*01  3    ------------------------------------.........---------------------------------------------  11
J  96.0% (48/50)    IGHJ3*02     1    ----------------------------------------------..........G.................A...............  44

                                            
                                      S  S  
                    Query_9865   362  CTTCAG  367
J  96.0% (48/50)    IGHJ3*02     45   ......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_202960

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           416     2e-118
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCGTGTGAA	GGTTCGGGGAATTAT	CCCTTGGCAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCGTGTGAAGGTTCGGGGAATTATCCCTTGGCAGAC	AACEGSGNYPLAD	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	276	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  I  S  C  K  A  S  G  G  T  F  S  S  S
                    Query_9866   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGATCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTC  90
V  96.5% (276/286)  IGHV1-69*06  6    ..................G.................................G....................................A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  D  T  A  N  Y  A  Q
                    Query_9866   91   TGCTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGATACAGCAAATTACGCACA  180
V  96.5% (276/286)  IGHV1-69*06  96   ........G..............................................................G.........C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  D  Y  M  E  L  R  S  L  S  S  E  D  T  A
                    Query_9866   181  GAGGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGACTACATGGAGCTGCGCAGCCTGAGCTCTGAGGACACGGC  270
V  96.5% (276/286)  IGHV1-69*06  186  ..A...............................................C.............A..........A..............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  A  C  E  G  S  G  N  Y  P  L  A  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9866   271  CGTGTATTACTGTGCGGCGTGTGAAGGTTCGGGGAATTATCCCTTGGCAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  96.5% (276/286)  IGHV1-69*06  276  ................----------------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                       
D  93.3% (14/15)    IGHD3-10*01  11   -------------------------..........G....----------------------------------------------  25
J  100.0% (36/36)   IGHJ4*02     13   --------------------------------------------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_202961

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            403     1e-114
IGHD4-17*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGGACACATTCCGTGGGGGGGGGGAGC	CGGTGACTAC	GGCAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGACACATTCCGTGGGGGGGGGGAGCCGGTGACTACGGCAATGACTAC	ARGGHIPWGGGAGDYGNDY	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	70	5	0	93.3
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	277	19	0	93.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  E  Y  T  F  T 
                    Query_9867   1    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACTTCCGAATACACCTTCACC  90
V  93.6% (277/296)  IGHV1-8*01   1    .....G.....G...........G.............................................G....T.G.............  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  F  D  I  H  W  V  R  Q  A  S  G  Q  G  L  Q  W  M  G  R  M  N  P  N  S  G  H  T  A  Y 
                    Query_9867   91   AGTTTTGATATCCACTGGGTGCGACAGGCCTCTGGACAAGGGCTTCAGTGGATGGGACGGATGAACCCTAACAGTGGTCACACAGCCTAT  180
V  93.6% (277/296)  IGHV1-8*01   91   ....A.......A.................A..............G...........T....................A......G....  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  S  M  T  R  N  T  S  I  N  T  A  Y  M  E  L  S  S  L  K  S  E  D 
                    Query_9867   181  GCACAGAAGTTCCAGGGCAGAGTCAGCATGACCAGGAACACCTCCATAAACACAGCCTACATGGAGCTGAGTAGCCTGAAATCTGAGGAC  270
V  93.6% (277/296)  IGHV1-8*01   181  .........................C.......................G.....................C.......G..........  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  V  Y  Y  C  A  R  G  G  H  I  P  W  G  G  G  A  G  D  Y  G  N  D  Y  W  G  Q  G  T 
                    Query_9867   271  ACGGCCGTCTATTATTGTGCGAGAGGCGGACACATTCCGTGGGGGGGGGGAGCCGGTGACTACGGCAATGACTACTGGGGCCAGGGAACC  360
V  93.6% (277/296)  IGHV1-8*01   271  ........G.....C...........----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R  G                                                                
D  100.0% (10/10)   IGHD4-17*01  7    -----------------------------------------------------..........---------------------------  16
J  100.0% (41/41)   IGHJ4*02     8    --------------------------------------------------------------------......................  29

                                                         
                                       L  V  T  V  S  S  
                    Query_9867   361  CTGGTCACCGTCTCCTCAG  379
J  100.0% (41/41)   IGHJ4*02     30   ...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_224641

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           347     7e-98
IGHD6-13*01                                                                                           21.8    0.042
IGHJ2*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-13*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAGGTCGGA	ATAGCAGCAGTTGG	AACCCC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAGGTCGGAATAGCAGCAGTTGGAACCCCCTGGTACTTCGATCTC	AKDKVGIAAVGTPWYFDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  F  A  F  S  F  S  S  Y  A  M  H  R  V  R  Q  A  P  G  K  G  L  
                    Query_9868   1    GGTCCCTGAGACTCTCCTGTGAAGCCTTTGCATTCAGTTTCAGTAGCTATGCCATGCACCGGGTCCGCCAGGCACCAGGCAAGGGGCTAG  90
V  94.4% (236/250)  IGHV3-30*18  47   .....................C.....C..G.....CC.............G.......T.............T..............G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  T  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9868   91   AGTGGGTGGCAGTTATCTCATATGATGGAACTAAGAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (236/250)  IGHV3-30*18  137  ................A.............G...T.......................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  K  V  G  I  A  A  
                    Query_9868   181  AGAACACGGTGTATCTGCAAATGAACAGCCTGAGACCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATAAGGTCGGAATAGCAGCAG  270
V  94.4% (236/250)  IGHV3-30*18  227  ........C..........................G..................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD6-13*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      V  G  T  P  W  Y  F  D  L  W  G  R  G  T  L  V  S  V  S  S  
                    Query_9868   271  TTGGAACCCCCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCTCTGTCTCCTCAG  330
D  92.9% (13/14)    IGHD6-13*01  15   C...--------------------------------------------------------  18
J  98.0% (49/50)    IGHJ2*01     4    ----------.....................................A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_224640

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         386     2e-109
IGHD2-21*02                                                                                           19.9    0.18  
IGHJ4*02                                                                                              50.7    2e-10 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ATCGAGTCGAC	TGTGGCGGTGGCTGCT	CTCCCCGACGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAATCGAGTCGACTGTGGCGGTGGCTGCTCTCCCCGACGGC	ARIESTVAVAALPDG	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	70	4	0	94.6
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	46	5	0	90.2
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	295	6	5	1	0	83.3
Total	N/A	N/A	293	270	23	0	92.2


Alignments

                                        <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                           M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  V  S  L  R  I  S  C  L  G  S  G  Y  N  F  T  
                    Query_9869     3    AAATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGTGTCTCTGAGGATCTCCTGTTTGGGTTCTGGATACAACTTTACCA  92
V  92.2% (270/293)  IGHV5-10-1*01  2    ..G..........................................A...................AA..............G........  91
                                           V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  

                                        T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                        N  Y  W  I  N  W  V  R  Q  L  P  G  K  G  L  E  W  R  G  R  I  D  P  S  D  F  Y  T  N  Y  
                    Query_9869     93   ACTACTGGATCAATTGGGTGCGCCAGCTTCCCGGGAAAGGCCTGGAGTGGAGGGGGAGGATTGATCCTAGTGACTTTTACACCAACTACA  182
V  92.2% (270/293)  IGHV5-10-1*01  92   G...........GC............A.G......................T.......................C...T..........  181
                                        S  Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  

                                        ----------------------------------------------FR3-IMGT------------------------------------
                                        S  P  S  F  Q  G  H  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  R  T  L  R  A  S  D  
                    Query_9869     183  GTCCGTCCTTCCAAGGCCACGTCACCATTTCAGCTGACACGTCCATCAGCACTGCCTACCTCCAGTGGAGGACCTTGAGGGCCTCGGACA  272
V  92.2% (270/293)  IGHV5-10-1*01  182  .C..........................C..........A.....................G........C.G.C...A...........  271
                                        S  P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                        ----------------><-----------------CDR3-IMGT----------------->                            
                                        T  A  I  Y  Y  C  A  R  I  E  S  T  V  A  V  A  A  L  P  D  G  W  G  Q  G  P  M  V  I  V  
                    Query_9869     273  CCGCCATATATTACTGTGCGCGAATCGAGTCGACTGTGGCGGTGGCTGCTCTCCCCGACGGCTGGGGCCAGGGACCCATGGTCATCGTCT  362
V  92.2% (270/293)  IGHV5-10-1*01  272  .......G............A..-------------------------------------------------------------------  294
                                        T  A  M  Y  Y  C  A  R                                                                    
D  87.5% (14/16)    IGHD2-21*02    8    ----------------------------------.....T....A.....----------------------------------------  23
J  91.4% (32/35)    IGHJ4*02       14   -------------------------------------------------------------.............A..C......C.....  42

                                              
                                        S  S  
                    Query_9869     363  CCTCAG  368
J  91.4% (32/35)    IGHJ4*02       43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_224642

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ2*01                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	TACTATAATCCTAGTGGTTATTAC	GGTTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACTATAATCCTAGTGGTTATTACGGTTTCTGGTACTTCTATCTC	ARDYYNPSGYYGFWYFYL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	239	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_9870   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.6% (239/245)  IGHV4-59*01  49   ............................................................A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  I  S  K  N 
                    Query_9870   91   TGGATTGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGATATCTCCAAGAAC  180
V  97.6% (239/245)  IGHV4-59*01  139  ........G....................................................................C.CG.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  Y  Y 
                    Query_9870   181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACTACTATAATCCTAGTGGTTATTAC  270
V  97.6% (239/245)  IGHV4-59*01  229  ...................G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (21/24)    IGHD3-22*01  5    ------------------------------------------------------------------......G..AG.............  28

                                      -------------------->                                 
                                       G  F  W  Y  F  Y  L  W  G  R  G  T  L  V  T  V  S  S 
                    Query_9870   271  GGTTTCTGGTACTTCTATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCA  324
J  98.0% (48/49)    IGHJ2*01     4    -----..........G......................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_224647

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	N/A	TCGACCCTGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCGACCCTGCTTGACAAA	ASTLLDK	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9871   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGCACCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (229/245)  IGHV3-23*01  47   ....................................C........G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  T  G  I  S  G  S  G  E  N  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_9871   91   AGTGGGTCACAGGTATCAGTGGTAGTGGTGAAAACACATACTACGCAGACTCCGTGAAGGGCCGTTTCACCGTCTCCAGAGACAATTCCA  180
V  93.5% (229/245)  IGHV3-23*01  137  ........T...C...T.............GT.G..............................G......A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  T  V  S  V  Q  M  D  S  L  S  A  E  D  T  A  V  Y  Y  C  A  S  T  L  L  D  K  W  G  
                    Query_9871   181  AGAACACGGTGTCTGTGCAAATGGACAGCCTGAGCGCCGAGGACACGGCCGTATATTACTGTGCGTCGACCCTGCTTGACAAATGGGGCC  270
V  93.5% (229/245)  IGHV3-23*01  227  ........C...A.C........A..........A..............................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  92.9% (39/42)    IGHJ4*02     7    ---------------------------------------------------------------------------.....T.C.......  21

                                                                 
                                      Q  G  T  L  V  T  V  S  P  
                    Query_9871   271  AGGGAACCCTGGTCACCGTCTCCCCAG  297
J  92.9% (39/42)    IGHJ4*02     22   .......................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_224649

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            316     2e-88
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ6*01                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CGG	CTACGGTAACTAC	TTCGCT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCGGCTACGGTAACTACTTCGCTGGTATGGACGTC	AGYGNYFAGMDV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  E  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9872   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACGTTTGAGGATTATGCCATGCACTGGGTCCGCCAAGCCCCAGGGAAGGGCCTGG  90
V  91.4% (223/244)  IGHV3-9*01   47   ................................T....C.....T.......................G.....T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  R  I  S  W  T  S  G  T  I  D  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  D  A  
                    Query_9872   91   AGTGGGTCGCAAGGATTAGTTGGACGAGTGGAACTATAGACTATGCGGACTCTGTGAAGGGCCGATTCATCATCTCCAGAGACGACGCCA  180
V  91.4% (223/244)  IGHV3-9*01   137  ........T..G.T..........AT.....T.GC....G.............................C.............A......  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  G  Y  G  N  Y  F  A  G  
                    Query_9872   181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGAGAGTTGAAGACACGGCCCTGTATTATTGTGCCGGCTACGGTAACTACTTCGCTGGTA  270
V  91.4% (223/244)  IGHV3-9*01   227  ..........G.........................C...G.........T.......C.....--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  92.3% (12/13)    IGHD4-17*01  4    -------------------------------------------------------------------.......G.....----------  16
J  91.3% (42/46)    IGHJ6*01     18   --------------------------------------------------------------------------------------....  21

                                      ------->                                  
                                      M  D  V  W  G  Q  G  T  T  V  I  V  S  S  
                    Query_9872   271  TGGACGTCTGGGGACAAGGGACGACGGTCATCGTCTCATCAG  312
J  91.3% (42/46)    IGHJ6*01     22   .............G........C.......C......C....  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_224648

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD6-19*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGCCCCCCGTACCGCA	TATAGCAGTGCCTG	CCACG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGCCCCCCGTACCGCATATAGCAGTGCCTGCCACGGACTAC	ARWPPVPHIAVPATDY	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  T  S  R  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_9873   4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCACGAGTAGGTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  95.5% (231/242)  IGHV4-59*01  50   .....TCC...A........................TC.....T..............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  M  N  
                    Query_9873   94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCATGAACC  183
V  95.5% (231/242)  IGHV4-59*01  140  ....................................................................................A.....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  K  M  S  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  W  P  P  V  P  H  I  A  V  
                    Query_9873   184  AGTTCTCCCTGAAGATGAGCTCTGTGGCCGCTGCGGACACGGCCGTGTATTATTGTGCGAGATGGCCCCCCGTACCGCATATAGCAGTGC  273
V  95.5% (231/242)  IGHV4-59*01  230  ..............C...........A.........................C.........----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  92.9% (13/14)    IGHD6-19*01  4    -------------------------------------------------------------------------------..........G  14

                                      ------------->                                  
                                      P  A  T  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_9873   274  CTGCCACGGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  321
D  92.9% (13/14)    IGHD6-19*01  15   ...---------------------------------------------  17
J  97.5% (39/40)    IGHJ4*02     9    --------............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_28401

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            304     9e-85
IGHD6-13*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGGAGGGGGTGAG	AGCAGCTGG	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGGAGGGGGTGAGAGCAGCTGGTGACTTC	ARWEGVRAAGDF	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	16	5	0	76.2
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	221	27	0	89.1


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  G  S  I  R  G  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_9874   1    GGTCCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATAAGAGGGAGTAACTGGTGGAGTTGGGTCCGGCAGCCCCCAGGGAAGGGGC  90
V  89.1% (221/248)  IGHV4-4*02   47   ..A.....TCC...A....C....................C..CA.T.......................C...................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  F  H  T  G  D  T  N  Y  N  P  S  L  K  S  R  L  T  L  S  V  D  N  S  
                    Query_9874   91   TGGAGTGGATCGGGGAAATCTTTCATACTGGAGACACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCTTATCAGTAGACAACTCCA  180
V  89.1% (221/248)  IGHV4-4*02   137  ..........T..........A.....G...GAG...............................G.....A.............G....  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      N  N  Q  F  S  L  N  L  R  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  W  E  G  V  R  A  A  
                    Query_9874   181  ACAATCAGTTTTCCCTGAACCTGAGGTCTGTGTCCGCCGCGGACACGGCCGTCTATTACTGTGCGAGATGGGAGGGGGTGAGAGCAGCTG  270
V  89.1% (221/248)  IGHV4-4*02   227  .G..C.....C........G.....C......A...................G...............----------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-13*01  10   ----------------------------------------------------------------------------------........  17

                                      ------->                                  
                                      G  D  F  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_9874   271  GTGACTTCTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  312
D  100.0% (9/9)     IGHD6-13*01  18   .-----------------------------------------  18
J  95.1% (39/41)    IGHJ4*02     8    -.....A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_260946

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           343     2e-96
IGHD2-15*01                                                                                           33.4    2e-05
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATGAAA	GATATTGTAGTGAAGGTAGTTGCTAC	CCTCCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTACCCTCCATACTTTGACTTC	ARYERYCSEGSCYPPYFDF	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	254	35	0	87.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  K  I  S  C  K  T  S  G  Y  S  F  S  N  Y
                    Query_9875   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAAAAGCCCGGGCAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGTTTCAGCAACTA  90
V  87.9% (254/289)  IGHV5-51*01  6    .....................A..................G.......................GG............C..T.C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  S  G  E  G  L  E  W  M  G  I  I  Y  A  G  D  S  D  I  T  Y  S  P
                    Query_9875   91   TTGGATCGGCTGGGTGCGCCAGATGTCCGGTGAAGGCCTGGAGTGGATGGGAATCATCTATGCTGGCGACTCTGACATTACATATAGTCC  180
V  87.9% (254/289)  IGHV5-51*01  96   C........................C....GA...................G.........C....T........T.CC.G...C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  R  V  T  I  S  V  D  K  A  I  D  T  A  Y  V  Q  W  S  S  L  K  A  W  D  T  A
                    Query_9875   181  GTCCTTTGAGGGCCGGGTCACCATCTCAGTCGACAAGGCCATCGACACCGCCTACGTACAGTGGAGCAGTCTGAAGGCCTGGGACACCGC  270
V  87.9% (254/289)  IGHV5-51*01  186  ......CC.A....A..............C.......T.....AG..........C.G...........C..........C.........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        T  Y  Y  C  A  R  Y  E  R  Y  C  S  E  G  S  C  Y  P  P  Y  F  D  F  W  G  Q  G  T  P  V
                    Query_9875   271  CACATATTACTGTGCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTACCCTCCATACTTTGACTTCTGGGGCCAGGGAACCCCGGT  360
V  87.9% (254/289)  IGHV5-51*01  276  ..TG...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  88.5% (23/26)    IGHD2-15*01  3    --------------------------............GT.....C......--------------------------------------  28
J  93.5% (43/46)    IGHJ4*02     3    ----------------------------------------------------------..........A.................T...  34

                                                    
                                        S  V  S  S  
                    Query_9875   361  CTCCGTCTCCTCAG  374
J  93.5% (43/46)    IGHJ4*02     35   .A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_260942

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD2-21*01                                                                                           18.0    0.59 
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CAGTTTCTGTCTTAGTTTGGACCGGGGAGT	TTGTGGTGG	N/A	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGGGGAGTTTGTGGTGGTTTTGATATG	ARGSFCLSLDRGVCGGFDM	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  N  G  G  S  L  N  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9876   1    ACCCTGTCCCTCACCTGCGCCGTCAATGGTGGGTCCCTCAATGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAG  90
V  92.2% (226/245)  IGHV4-34*01  49   ....................T...T...........T...G..G.......................................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  Q  S  G  T  T  N  Y  K  P  S  L  K  S  R  V  I  T  S  V  D  T  S  K  N 
                    Query_9876   91   TGGATTGGGGAAATCAATCAAAGTGGCACCACCAACTACAAGCCGTCCCTCAAGAGTCGAGTAATCACATCGGTGGACACGTCCAAGAAT  180
V  92.2% (226/245)  IGHV4-34*01  139  ....................T.....A.G............C....................C.C..T...A..A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  F  C  L  S  L  D  R 
                    Query_9876   181  CAGTTCTCCTTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGG  270
V  92.2% (226/245)  IGHV4-34*01  229  .........C.....C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      ----------------------->                               
                                       G  V  C  G  G  F  D  M  W  G  Q  G  T  M  V  T  V  S  
                    Query_9876   271  GGAGTTTGTGGTGGTTTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTT  325
D  100.0% (9/9)     IGHD2-21*01  7    -----.........-----------------------------------------  15
J  97.6% (40/41)    IGHJ3*02     7    --------------.........C...............................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_260943

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           338     5e-95
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	CTCC	ATAGTGCTTACGAGTAC	GGGAAAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGCTCCATAGTGCTTACGAGTACGGGAAATTGGTTCGTCCCC	SSSIVLTSTGNWFVP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	4	1	0	80
Total	N/A	N/A	242	229	13	0	94.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  S  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9877   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTCAGTAGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.6% (229/242)  IGHV4-59*01  49   ....................................A..................G.........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  L  D  T  S  K  T 
                    Query_9877   91   TGGATTGGGTATATCTATTACAGTGGAACCACCAACTACAATCCCTCCCTCGAGAGTCGAGTCACCATATCTTTAGACACGTCCAAGACC  180
V  94.6% (229/242)  IGHV4-59*01  139  ..........................G.G............C.........A...................AG...............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  A  Y  Y  C  S  S  S  I  V  L  T  S  T  G  N 
                    Query_9877   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGCGTATTACTGTTCGAGCTCCATAGTGCTTACGAGTACGGGAAAT  270
V  94.6% (229/242)  IGHV4-59*01  229  ...............C..............................T..........G....----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  82.4% (14/17)    IGHD5-12*01  7    ------------------------------------------------------------------......GC.....T...-------  23

                                      ----------->                                  
                                       W  F  V  P  W  G  Q  G  T  L  V  F  V  S  S  
                    Query_9877   271  TGGTTCGTCCCCTGGGGCCAGGGAACCCTGGTCTTCGTCTCCTCAG  316
J  93.5% (43/46)    IGHJ5*02     6    .......A.........................AC...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_260940

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           410     1e-116
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	274	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_9878   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  95.8% (274/286)  IGHV5-51*01  6    ..................................................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_9878   91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  95.8% (274/286)  IGHV5-51*01  96   ......................A.......G.............G..........................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  R  V  I  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  S  T  L  R  A  S  D  T  A
                    Query_9878   181  GTCCTTCCAAGGCCGGGTCATCATCTCAGCCGACAAGTCCGTCAGCACCGCCTACCTGCAGTGGAGCACCCTGAGGGCCTCGGACACCGC  270
V  95.8% (274/286)  IGHV5-51*01  186  ..............A.....C...................A...........................G.....A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9878   271  CGTGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.8% (274/286)  IGHV5-51*01  276  .A..............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_28403

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           363     1e-102
IGHD3-9*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GAC	ATTATGAGATTTTGACTGGTTATTAT	TCGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATGAGATTTTGACTGGTTATTATTCGGGCTTTGACTAC	ARHYEILTGYYSGFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9879   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTAGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (239/246)  IGHV3-23*01  47   .............................G............................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  G  G  S  T  Y  Y  S  N  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9879   91   AGTGGGTCTCTACTATTAGTGGTAGTGGTGGTAGCACATACTACTCAAACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  97.2% (239/246)  IGHV3-23*01  137  ..........AG................................G..G..........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  H  F  C  A  R  H  Y  E  I  L  T  G  
                    Query_9879   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTACATTTCTGTGCGAGACATTATGAGATTTTGACTGGTT  270
V  97.2% (239/246)  IGHV3-23*01  227  .....................................................T...A........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.3% (24/26)    IGHD3-9*01   3    ---------------------------------------------------------------------....C..T.............  23

                                      T------------------>                                  
                                      Y  Y  S  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9879   271  ATTATTCGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  92.3% (24/26)    IGHD3-9*01   24   .....-------------------------------------------------  28
J  100.0% (44/44)   IGHJ4*02     5    ----------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_175288

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           321     7e-90
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACAGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACAGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9880   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.2% (224/243)  IGHV4-34*01  49   ................................G...T..................G...........................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  D  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  L  S  L  D  M  S  K  K 
                    Query_9880   91   TGGATTGGGGAAATCGATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGCGTCTCCTTATCATTAGACATGTCCAAGAAG  180
V  92.2% (224/243)  IGHV4-34*01  139  ...............A.............C..................C..A.......A...A..A.....G......C.........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  V  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y 
                    Query_9880   181  CAGTTCTCCGTGAAGGTGACGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAACAGTAAAGGGGGTTATTACTGTCTAC  270
V  92.2% (224/243)  IGHV4-34*01  229  .........C.....C...GC..........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  20   --------------------------------------------------------------------------..........------  29

                                      -------------------->                                 
                                       Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9880   271  CAGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  100.0% (40/40)   IGHJ6*02     23   --------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_96488

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           372     2e-105
IGHD1-1*01                                                                                            12.2    33    
IGHJ5*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	CCCGACATATGTCCTCGAG	GGAACG	GAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGACCCGACATATGTCCTCGAGGGAACGGATTGGTTCGACCCC	TTDPTYVLEGTDWFDP	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	247	9	0	96.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  G  P  G  K  G  L  
                    Query_9881   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGGTCCAGGGAAGGGGCTGG  90
V  96.5% (247/256)  IGHV3-15*01  47   .......T................................................................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  T  D  G  E  T  K  E  Y  A  A  P  V  K  G  R  F  A  I  S  R  D  
                    Query_9881   91   AGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGAGACAAAAGAGTACGCTGCACCCGTGAAAGGCAGATTCGCCATCTCAAGAGATG  180
V  96.5% (247/256)  IGHV3-15*01  137  ....................................G.....C...C...........................A...............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  F  C  T  T  D  P  T  Y  V  
                    Query_9881   181  ATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTCAAATCCGAGGACACAGCCGTGTATTTCTGTACCACAGACCCGACATATGTCC  270
V  96.5% (247/256)  IGHV3-15*01  227  .....................................G...A.....................A............--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 

                                      R3-IMGT------------------>                                  
                                      L  E  G  T  D  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9881   271  TCGAGGGAACGGATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (6/6)     IGHD1-1*01   10   -----......-------------------------------------------------  15
J  100.0% (46/46)   IGHJ5*02     6    --------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_260948

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            324     8e-91
IGHD3-16*02                                                                                           14.1    8.9  
IGHJ4*02                                                                                              58.4    1e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCCA	AACCGCGGC	GGGTAGTAATCGT	GGATGGTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCCAAACCGCGGCGGGTAGTAATCGTGGATGGTATGACTTT	AQTAAGSNRGWYDF	263	304	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	45	1	0	97.8
CDR1-IMGT	47	76	30	24	6	0	80
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	148	21	16	5	0	76.2
FR3-IMGT	149	262	114	100	14	0	87.7
CDR3-IMGT (germline)	263	267	5	4	1	0	80
Total	N/A	N/A	267	237	30	0	88.8


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  S  F  S  G  F  S  L  S  S  V  G  L  G  V  A  W  I  R
                    Query_9882   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCAGCTTCTCTGGCTTCTCACTCAGCAGTGTGGGACTGGGTGTGGCCTGGATCCG  90
V  88.8% (237/267)  IGHV2-5*01   30   ......................................C.........G.............C.AGT...G.........G.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  D  I  Y  W  S  D  D  T  L  Y  R  P  S  L  K  T  R  L  T
                    Query_9882   91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCAGACATTTACTGGAGCGATGATACATTATACAGGCCATCTCTGAAGACCAGACTCAC  180
V  88.8% (237/267)  IGHV2-5*01   120  ..................................CT......T....AT.......AGCGC.....C.............G...G.....  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        V  T  K  D  T  S  K  N  Q  V  S  L  R  M  T  N  T  G  P  A  D  T  A  T  Y  Y  C  A  Q  T
                    Query_9882   181  CGTCACCAAGGACACCTCCAAAAACCAGGTGTCCCTTAGAATGACCAACACGGGCCCTGCGGACACAGCCACGTATTACTGTGCCCAAAC  270
V  88.8% (237/267)  IGHV2-5*01   210  .A.............................GT.....C...........T..A.....T............A...........A..---  296
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A      

                                      ---------CDR3-IMGT--------------->                                
                                        A  A  G  S  N  R  G  W  Y  D  F  W  G  L  G  T  L  V  T  V  S  S
                    Query_9882   271  CGCGGCGGGTAGTAATCGTGGATGGTATGACTTTTGGGGCCTGGGAACCCTGGTCACCGTCTCCTC  336
D  84.6% (11/13)    IGHD3-16*02  19   ------...G...T.....-----------------------------------------------  31
J  92.3% (36/39)    IGHJ4*02     8    ---------------------------.....AC.......A........................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_260949

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           367     6e-104
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9883   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9883   91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.2% (242/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_9883   181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  97.2% (242/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_9883   271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_245200

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         315     5e-88
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGTCAA	TACTATGCTATTAGTGCTTATT	C	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGTCAATACTATGCTATTAGTGCTTATTCCTACTTTGACCAC	ARGQYYAISAYSYFDH	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	224	23	0	90.7


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  D  V  S  G  G  S  I  S  S  G  G  Y  Y  W  N  W  I  R  Q  T  P  G  K  G  
                    Query_9884     4    CCCTGAGACTCTCCTGCGATGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAATTGGATTCGACAGACCCCAGGGAAGGGCC  93
V  90.7% (224/247)  IGHV4-30-4*01  50   .....TCC...A.....AC.............................A...........G......C..C...C...............  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  S  V  Y  Y  S  G  R  T  H  D  S  P  S  L  K  S  R  V  T  L  S  V  D  T  S  
                    Query_9884     94   TGGAGTGGATTGGGTCCGTCTATTACAGTGGGCGCACCCATGACAGCCCGTCCCTCAAGAGTCGAGTTACCTTATCAGTCGACACGTCCA  183
V  90.7% (224/247)  IGHV4-30-4*01  140  ...............A.A..............A.....T.CT...A.........................A.......A..........  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                        K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  Q  Y  Y  A  I  S  
                    Query_9884     184  AGAACCAGTTCTCCCTGAGGTTGAGCTCTGTGACTGCCGCAGACACGGCCGTCTATTACTGTGCCAGGGGTCAATACTATGCTATTAGTG  273
V  90.7% (224/247)  IGHV4-30-4*01  230  ..................A.C...............................G..............-----------------------  296
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  86.4% (19/22)    IGHD3-22*01    5    --------------------------------------------------------------------------.......A..G.....  20

                                        T------------------>                                  
                                        A  Y  S  Y  F  D  H  W  G  R  G  I  L  V  T  V  T  S  
                    Query_9884     274  CTTATTCCTACTTTGACCACTGGGGCCGGGGAATCCTGGTCACCGTCACGTCAG  327
D  86.4% (19/22)    IGHD3-22*01    21   G.....------------------------------------------------  26
J  89.4% (42/47)    IGHJ4*02       2    -------..........T.........A.....C.............T.C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_97746

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           405     4e-115
IGHD2-21*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	ATTTTGGTGG	ATAGAGATAGAGTTCC	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTC	ARGGFWWIEIEFRMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  Y 
                    Query_9885   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACCGACTAT  91
V  94.8% (274/289)  IGHV1-18*01  7    .............................................................................C......AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  W  I  S  A  Y  T  G  N  T  K  N  A  Q 
                    Query_9885   92   GGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGATGGATCAGCGCTTACACTGGTAATACAAAAAATGCACAA  181
V  94.8% (274/289)  IGHV1-18*01  97   .......G.....................................A.....................A......C.....CT.......G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  V  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_9885   182  AAAGTCCAGGGCAGAGTGACCATGACCACAGACACATCCACGAGAACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (274/289)  IGHV1-18*01  187  ..GC.............C..........................C...............C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  G  G  F  W  W  I  E  I  E  F  R  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_9885   272  GTGTATTACTGTGCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  361
V  94.8% (274/289)  IGHV1-18*01  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD2-21*01  6    -----------------------...G......---------------------------------------------------------  15
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------.........................................  59

                                         
                                       S 
                    Query_9885   362  TCA  364
J  100.0% (44/44)   IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_245201

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           299     2e-83
IGHD2-15*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GTCGGGAAGAAC	AGTGGTG	TCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTCGGGAAGAACAGTGGTGTCTTTTGACTTA	AKSGRTVVSFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	219	28	0	88.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  T  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9886   1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCAACTTTAGCACGTATGCCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  88.7% (219/247)  IGHV3-23*01  47   ......................A.............C........GC..........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  N  S  T  K  Y  A  D  S  V  K  G  R  I  T  I  S  R  D  N  S  
                    Query_9886   91   AGTGGGTCTCAGCCATCAGTGGCAGTGGTAATAGCACAAAATATGCAGACTCCGTTAAGGGCCGGATCACCATCTCCAGAGACAATTCCA  180
V  88.7% (219/247)  IGHV3-23*01  137  .............T..T.....T......GG.......T.C..C...........G.........T........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  R  M  I  Y  L  Q  M  N  S  M  G  A  E  D  T  A  V  Y  L  C  A  K  S  G  R  T  V  V  S  
                    Query_9886   181  AGAGAATGATATATCTTCAAATGAACAGTATGGGAGCCGAGGACACGGCCGTATATCTTTGTGCGAAGTCGGGAAGAACAGTGGTGTCTT  270
V  88.7% (219/247)  IGHV3-23*01  227  ...AC.C.C.G.....G...........CC..A.......................TAC........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-15*01  11   -------------------------------------------------------------------------------.......----  17
J  90.7% (39/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                  
                                      F  D  L  W  G  Q  G  I  Q  V  T  V  S  S  
                    Query_9886   271  TTGACTTATGGGGCCAGGGAATCCAGGTCACCGTCTCCTCAG  312
J  90.7% (39/43)    IGHJ4*02     7    ......AC.............C..T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_53992

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           371     7e-105
IGHD3-22*01                                                                                           50.7    9e-11 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCGCAATG	GTATTACTATGATAGTAGTGGTTATT	TA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCGCAATGGTATTACTATGATAGTAGTGGTTATTTAGACTAC	ARAQWYYYDSSGYLDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	242	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9887   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTAACTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  98.0% (242/247)  IGHV3-64*01  47   .....................................C.......G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  P  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_9887   91   AATATGTTTCAGCTATTAGTCCTAATGGGGGTAGCACATATTATGCAAACTCTGTGAAGGGCAGATTGACCATCTCCAGAGACAATTCCA  180
V  98.0% (242/247)  IGHV3-64*01  137  ....................AG.............................................C......................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R  A  Q  W  Y  Y  Y  D  
                    Query_9887   181  AGAACACGCTGTATCTTCAAATGGGCAGCCTGAGAGCTGAGGACATGGCTGTGTATTACTGTGCGAGGGCGCAATGGTATTACTATGATA  270
V  98.0% (242/247)  IGHV3-64*01  227  ...................................................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A                          
D  100.0% (26/26)   IGHD3-22*01  1    ----------------------------------------------------------------------------..............  14

                                      T------------------>                                  
                                      S  S  G  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9887   271  GTAGTGGTTATTTAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (26/26)   IGHD3-22*01  15   ............------------------------------------------  26
J  100.0% (40/40)   IGHJ4*02     9    --------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_245204

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         431     4e-123
IGHD3-16*01                                                                                           16.1    2.5   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTTT	TTTGGGGG	G	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTTTTTGGGGGGCGGTTTGGACGTC	ARLFLGGGLDV	290	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	71	4	0	94.7
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	111	3	0	97.4
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	294	285	9	0	96.9


Alignments

                                        <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                         E  V  Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  G  F  T 
                    Query_9888     2    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGCTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACGGCTTTACC  91
V  96.9% (285/294)  IGHV5-10-1*01  1    ..A..G........G...............G..................................................A........  90
                                         E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T 

                                        GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                         S  Y  W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y 
                    Query_9888     92   AGCTACTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAACTAC  181
V  96.9% (285/294)  IGHV5-10-1*01  91   .............G............................................................................  180
                                         S  Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y 

                                        -----------------------------------------------FR3-IMGT-----------------------------------
                                         S  P  S  F  Q  G  H  V  T  I  P  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 
                    Query_9888     182  AGCCCGTCCTTCCAAGGCCACGTCACCATCCCAGCTGACAAGTCCATCAGCACTGCCTACCTGCAATGGAGCAGTCTGAAGGCCTCGGAC  271
V  96.9% (285/294)  IGHV5-10-1*01  181  ..............................T..................................G........C...............  270
                                         S  P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                        -----------------><-----------CDR3-IMGT----------->                                 
                                         T  A  M  Y  Y  C  A  R  L  F  L  G  G  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9888     272  ACCGCCATGTATTACTGTGCGAGACTTTTTTTGGGGGGCGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  355
V  96.9% (285/294)  IGHV5-10-1*01  271  ........................------------------------------------------------------------  294
                                         T  A  M  Y  Y  C  A  R                                                             
D  100.0% (8/8)     IGHD3-16*01    15   -----------------------------........-----------------------------------------------  22
J  97.8% (45/46)    IGHJ6*02       17   --------------------------------------....A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_245205

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            318     6e-89
IGHD6-19*01                                                                                           27.6    7e-04
IGHJ5*01                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAGGGGGG	GCAGTGGCTGGTAC	ACGGGCCCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGGGGGGGCAGTGGCTGGTACACGGGCCCCTTCGACTCC	ARVRGGSGWYTGPFDS	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  A  G  S  I  T  S  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9889   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGCTGGCTCCATCACTAGTAATAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.1% (225/247)  IGHV4-4*02   49   ............................G...........GC....G...C.......................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  A  N  Y  Q  P  S  L  W  S  R  V  T  I  S  L  D  R  S  K 
                    Query_9889   91   GAGTGGATTGGAGAAATCTATCATAGTGGGAGCGCCAACTATCAGCCGTCCCTCTGGAGCCGAGTCACCATATCACTAGACAGGTCCAAG  180
V  91.1% (225/247)  IGHV4-4*02   139  ...........G.....................A.......CA.C.........AA...T...............G......A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  Q  F  S  M  D  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  G  G  S  G  W  Y 
                    Query_9889   181  AACCAGTTCTCCATGGACTTGAACTCAGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGAGAGTAAGGGGGGGCAGTGGCTGGTAC  270
V  91.1% (225/247)  IGHV4-4*02   229  ............C..A.GC...G...T.......................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (14/14)   IGHD6-19*01  8    ----------------------------------------------------------------------------..............  21

                                      ----------------->                                  
                                       T  G  P  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_9889   271  ACGGGCCCCTTCGACTCCTGGGGCCAGGGAATCCTGGTCACCGTCTCGTCAG  322
J  93.0% (40/43)    IGHJ5*01     9    ---------.................A....C...............C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_36915

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            353     1e-99
IGHD2-2*01                                                                                            14.1    9.8  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGAGCCCCAA	TAGTCCCAGC	GCTGATATACAGACC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGAGCCCCAATAGTCCCAGCGCTGATATACAGACCCAACTGGTTCGCCCCC	ARERAPIVPALIYRPNWFAP	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	15	9	0	62.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	258	32	0	89


Alignments

                                     <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                      Q  L  V  Q  S  G  A  E  V  K  K  S  G  A  S  V  K  V  S  C  K  A  S  G  Y  R  F  D  S  H 
                    Query_9890  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGTCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGCTACAGGTTCGATAGTCAT  91
V  89.0% (258/290)  IGHV1-3*01  7    .....T...........G...............C.....................................A....CC...AC...CT..  96
                                      Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                     --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                      G  I  H  W  L  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  V  A  D  G  Y  T  R  Y  S  Q 
                    Query_9890  92   GGCATCCATTGGCTGCGCCAGGCCCCCGGACAAGGGCTTGAGTGGATGGGCTGGATCAACGTTGCCGATGGTTACACGAGATATTCACAG  181
V  89.0% (258/290)  IGHV1-3*01  97   .CT..G......G....................A................A..........C..G.A.....A....A.A..........  186
                                      A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                     -----------------------------------------FR3-IMGT-----------------------------------------
                                      R  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  F  V  E  L  R  S  L  R  S  E  D  T  A 
                    Query_9890  182  AGGTTCCAAGGGAGAGTCACCATTACCAGAGACACATCCGCGAGCACAGCTTTCGTGGAACTGAGGAGCCTGAGATCTGAAGACACGGCT  271
V  89.0% (258/290)  IGHV1-3*01  187  .A......G..C.................G....................C.A.A....G.....C........................  276
                                      K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                     -----------><-------------------------CDR3-IMGT------------------------>                  
                                      V  Y  Y  C  A  R  E  R  A  P  I  V  P  A  L  I  Y  R  P  N  W  F  A  P  W  G  Q  G  T  L 
                    Query_9890  272  GTCTATTACTGTGCGAGAGAAAGAGCCCCAATAGTCCCAGCGCTGATATACAGACCCAACTGGTTCGCCCCCTGGGGCCAGGGAACCCTG  361
V  89.0% (258/290)  IGHV1-3*01  277  ..G.................----------------------------------------------------------------------  296
                                      V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD2-2*01  13   -------------------------------....A.....-------------------------------------------------  22
J  97.9% (47/48)    IGHJ5*02    2    --------------------------------------------------------...........A......................  35

                                                   
                                      V  T  V  S  S
                    Query_9890  362  GTCACCGTCTCCTC  375
J  97.9% (47/48)    IGHJ5*02    36   ..............  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_36914

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9891   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9891   91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_9891   181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  95.5% (231/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9891   271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_36916

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9892   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_9892   91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_9892   181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9892   271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_36911

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           386     1e-109
IGHD3-3*01                                                                                            10.3    132   
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCG	TGGAG	AGCCAATA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTGGAGAGCCAATATTTGAGTCC	ARDRGEPIFES	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	269	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  S  S  V  K  V  S  C  K  T  S  G  G  P  F  S  T  Y
                    Query_9893   1    GCAGCTGGTGCAGTCTGGAGCTGAGCTGAAGAAGCCTGGGTCCTCTGTGAAGGTCTCCTGCAAGACTTCTGGAGGCCCCTTCAGCACCTA  90
V  92.4% (269/291)  IGHV1-69*01  6    ..................G......G...................G..................G...........A.........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        T  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  D  A  A  K  Y  A  H
                    Query_9893   91   TACTATCAGCTGGGTTCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCGGCATCATCCCTATCTTTGATGCCGCGAAGTACGCACA  180
V  92.4% (269/291)  IGHV1-69*01  96   .G.............G...................................A..G................G.A.A..A..C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  F  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  T  S  E  D  T  A
                    Query_9893   181  TAAGTTCCAGGGCAGAGTCACTTTTACCGCGGACGAATCTACGAGCACAGCCTACATGGAGCTGAGCAGCCTGACATCTGAGGACACGGC  270
V  92.4% (269/291)  IGHV1-69*01  186  G....................GA................C..................................G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        V  Y  Y  C  A  R  D  R  G  E  P  I  F  E  S  W  G  Q  G  T  L  L  S  V  S  S  
                    Query_9893   271  CGTCTATTACTGCGCGAGAGATCGTGGAGAGCCAATATTTGAGTCCTGGGGCCAGGGAACCCTGCTCAGCGTCTCCTCAG  350
V  92.4% (269/291)  IGHV1-69*01  276  ...G........T........-----------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD3-3*01   14   ------------------------.....---------------------------------------------------  18
J  90.7% (39/43)    IGHJ4*02     6    -------------------------------------.....C.A...................G...C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_36910

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           369     2e-104
IGHD1-26*01                                                                                           16.1    2.4   
IGHJ1*01                                                                                              56.4    4e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGAC	GGGAGCTA	TCCCTGGCGACTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGATCGACGGGAGCTATCCCTGGCGACTTC	SRSTGAIPGDF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	288	262	26	0	91


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  F 
                    Query_9894   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCGACTTT  91
V  91.0% (262/288)  IGHV1-18*01  7    ....................................................................................AG..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  T  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  R  A  A  Y  N  A  D  T  K  Y  T  P 
                    Query_9894   92   GGTGTCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGTTGGGATGGAGAGCCGCTTACAATGCTGACACAAAGTATACACCG  181
V  91.0% (262/288)  IGHV1-18*01  97   ...A...G.....................................A.........TCAG...........G.A.......C...G...A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  L  T  L  T  T  D  S  S  T  S  T  A  Y  L  D  L  R  S  L  R  S  D  D  T  A 
                    Query_9894   182  AAACTCCAGGGCAGACTCACCTTGACCACCGACTCATCCACGAGCACAGCCTACTTGGACTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  91.0% (262/288)  IGHV1-18*01  187  ..G............G.....A.......A...A....................A....GC.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       L  Y  Y  C  S  R  S  T  G  A  I  P  G  D  F  W  G  Q  G  P  L  V  T  V  S  S  
                    Query_9894   272  CTTTATTACTGTTCGAGATCGACGGGAGCTATCCCTGGCGACTTCTGGGGCCAGGGCCCCCTCGTCACCGTCTCCTCAG  350
V  91.0% (262/288)  IGHV1-18*01  277  G.G.........G.....-------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                              
D  100.0% (8/8)     IGHD1-26*01  9    -----------------------........------------------------------------------------  16
J  94.3% (33/35)    IGHJ1*01     18   --------------------------------------------.............A....G................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_226869

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           316     2e-88
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGG	AGCAGCAGCT	CTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGGAGCAGCAGCTCTATGACTAC	ARDREQQLYDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9895   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAATTCTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-21*01  47   .....................................C....G.AGC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  D  R  S  T  Y  M  S  H  A  D  S  V  K  G  R  F  T  I  S  R  D  D  G  
                    Query_9895   91   AGTGGGTCGCGTCCATTAGTGACAGAAGTACTTACATGTCCCACGCAGACTCAGTGAAGGGCCGATTCACCATTTCCAGAGACGACGGCA  180
V  90.4% (226/250)  IGHV3-21*01  137  ........T.A.........AGT..T....G......A.A.T...............................C.........A...C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  R  S  V  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  R  E  Q  Q  L  Y  
                    Query_9895   181  AGAGGTCAGTGTATCTGCAAATGAATAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGATAGGGAGCAGCAGCTCTATG  270
V  90.4% (226/250)  IGHV3-21*01  227  ...AC...C................C..............G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD6-13*01  7    ---------------------------------------------------------------------------..........-----  16
J  97.6% (40/41)    IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_9895   271  ACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.6% (40/41)    IGHJ4*02     10   ............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_226868

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           413     2e-117
IGHD5-18*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	GTGGACACACCTATGG	AGCCCGAACCGACCCCCATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGGACACACCTATGGAGCCCGAACCGACCCCCATCTTGACTAC	ARRGHTYGARTDPHLDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  I  F  R  T  Y
                    Query_9896   1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACATCTTTAGAACCTA  90
V  95.5% (277/290)  IGHV5-51*01  6    ....................C.............................A..........................G.....CC.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_9896   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  95.5% (277/290)  IGHV5-51*01  96   ........G.................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  T  S  A  D  H  S  I  S  T  A  Y  L  Q  W  S  S  R  K  A  S  D  T  A
                    Query_9896   181  GTCCTTCCAAGGCCAGGTCACCACCTCAGCCGACCACTCCATTAGCACCGCCTACCTGCAGTGGAGCAGCCGGAAGGCCTCGGACACCGC  270
V  95.5% (277/290)  IGHV5-51*01  186  .......................T..........A.G.....C............................T..................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  A  R  R  G  H  T  Y  G  A  R  T  D  P  H  L  D  Y  W  G  Q  G  T  L  V  S  V
                    Query_9896   271  CATATATTACTGTGCGAGACGTGGACACACCTATGGAGCCCGAACCGACCCCCATCTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGT  360
V  95.5% (277/290)  IGHV5-51*01  276  ...G................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  87.5% (14/16)    IGHD5-18*01  1    --------------------.....T...G......------------------------------------------------------  16
J  97.6% (41/42)    IGHJ4*02     7    --------------------------------------------------------.............................A....  40

                                              
                                        S  S  
                    Query_9896   361  CTCCTCAG  368
J  97.6% (41/42)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_226867

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           344     6e-97
IGHD2-21*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCCTACCG	ATACTGTGGTGGTGATTG	ATACTTCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCCTACCGATACTGTGGTGGTGATTGATACTTCCGACTAT	ARLPTDTVVVIDTSDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9897   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCAGCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  94.4% (234/248)  IGHV3-48*03  47   .....................C..............C................................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  N  T  G  T  T  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9897   91   AGTGGCTTTCATACATTAGTAATACTGGTACTACTACATACTACGCAGAGTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  94.4% (234/248)  IGHV3-48*03  137  .....G...............G..G.....G...C.T............C...................................C....  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  L  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  L  P  T  D  T  V  V  
                    Query_9897   181  AGAACTCACTGTATCTTCAATTGAACAGCCTGAGAGCCGACGACACGGCTGTTTATTACTGTGCGAGACTTCCTACCGATACTGTGGTGG  270
V  94.4% (234/248)  IGHV3-48*03  227  ................G...A...................G...........................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD2-21*01  4    ------------------------------------------------------------------------------...T........  15

                                      T------------------>                                
                                      V  I  D  T  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9897   271  TGATTGATACTTCCGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  322
D  94.4% (17/18)    IGHD2-21*01  16   ......----------------------------------------------  21
J  97.4% (37/38)    IGHJ4*02     9    --------------.....C................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_226866

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           411     5e-117
IGHD2-21*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	ATTTTGGTGG	ATAGAGATAGAGTTCC	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGCCGTC	ARGGFWWIEIEFRMAV	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	74	1	0	98.7
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	106	8	0	93
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	279	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_9898   3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACC  92
V  94.6% (279/295)  IGHV1-18*01  1    .....T.............................................................................C......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  W  I  S  A  Y  T  G  N  T  K  N 
                    Query_9898   93   GACTATGGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGATGGATCAGCGCTTACACTGGTAATACAAAAAAT  182
V  94.6% (279/295)  IGHV1-18*01  91   AG...........G.....................................A.....................A......C.....CT..  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  V  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_9898   183  GCACAAAAAGTCCAGGGCAGAGTGACCATGACCACAGACACATCCACGAGAACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGAC  272
V  94.6% (279/295)  IGHV1-18*01  181  .....G..GC.............C..........................C...............C.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  G  G  F  W  W  I  E  I  E  F  R  M  A  V  W  G  Q  G  T  T  V  T 
                    Query_9898   273  ACGGCCGTGTATTACTGTGCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGCCGTCTGGGGCCAAGGGACCACGGTCACC  362
V  94.6% (279/295)  IGHV1-18*01  271  .........................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  90.0% (9/10)     IGHD2-21*01  6    -----------------------------...G......---------------------------------------------------  15
J  97.7% (43/44)    IGHJ6*02     19   -------------------------------------------------------......A............................  53

                                               
                                       V  S  S 
                    Query_9898   363  GTCTCCTCA  371
J  97.7% (43/44)    IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_226865

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCGACC	GGGTACATCAGTGGC	GGCA	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCGACCGGGTACATCAGTGGCGGCATCGACCTC	AKATGYISGGIDL	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	24	16	5	3	66.7
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	247	222	22	3	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  D  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9899   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCAGTTTTGACACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  89.9% (222/247)  IGHV3-23*01  47   .....................C..............CC...AG..G.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  S  S  G     G  D  N  T  Y  Y  A  D  S  V  K  G  R  F  A  L  S  R  D  N  S  
                    Query_9899   91   AATGGGTCTCAGGTTCTAGTGGT---GGTGATAATACATACTACGCAGACTCCGTGAAGGGCCGGTTCGCCCTCTCCAGAGACAATTCCA  177
V  89.9% (222/247)  IGHV3-23*01  137  .G..........C.AT.......AGT....G..GC.................................A..A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  S  T  L  Y  L  H  M  N  G  L  R  V  E  D  T  A  I  Y  Y  C  A  K  A  T  G  Y  I  S  G  
                    Query_9899   178  AGAGCACACTGTATCTGCACATGAACGGCCTGAGAGTCGAGGACACGGCCATATATTACTGTGCGAAGGCGACCGGGTACATCAGTGGCG  267
V  89.9% (222/247)  IGHV3-23*01  227  ...A...G...........A......A.........C.............G................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  86.7% (13/15)    IGHD6-19*01  1    --------------------------------------------------------------------------.....T.G.......-  15

                                      ---------->                                  
                                      G  I  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9899   268  GCATCGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.6% (41/42)    IGHJ5*02     10   ---......C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_36919

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           352     3e-99
IGHD5-18*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGTCATGGTTAC	GGAGGAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGTCATGGTTACGGAGGAATTGACTAC	ARYSHGYGGIDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	234	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9900   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (234/243)  IGHV4-59*01  49   ...............................G........G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  S  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  K  N 
                    Query_9900   91   TGGATTGGTTATATCTACTACCGTGGGAGCTCCAACTCCAACCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAAGAAC  180
V  96.3% (234/243)  IGHV4-59*01  139  ........G........T...A........A......A......................G.............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  I  D 
                    Query_9900   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGTCATGGTTACGGAGGAATTGAC  270
V  96.3% (234/243)  IGHV4-59*01  229  .............A.................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  86.7% (13/15)    IGHD5-18*01  6    ---------------------------------------------------------------.....CT........------------  20
J  97.6% (41/42)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_9900   271  TACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  307
J  97.6% (41/42)    IGHJ4*02     12   ................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_226862

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           410     1e-116
IGHD1-1*01                                                                                            10.3    134   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAACG	GGTAACCCCATATCGCGGC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTAT	ARGTGNPISRLGY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_9901   1    GCAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTA  90
V  95.2% (276/290)  IGHV1-46*01  6    ..................G.C.....................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  I  I  N  P  S  A  G  S  T  N  Y  A  Q
                    Query_9901   91   CTATGTGCACTGGGTACGACAGGCCCCTGGACAAGGGCTTGAGTGGTTGGGAATAATCAACCCTAGTGCTGGTAGCACAAATTACGCACA  180
V  95.2% (276/290)  IGHV1-46*01  96   ....A..........G..............................A.....................G...........GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  L  D  L  S  S  L  K  S  D  D  T  A
                    Query_9901   181  GAAATTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACTTGGACCTGAGCAGCCTTAAATCTGACGACACGGC  270
V  95.2% (276/290)  IGHV1-46*01  186  ...G...................................................A....G...........G.G......G........  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  G  T  G  N  P  I  S  R  L  G  Y  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_9901   271  CGTGTATTACTGTGCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  356
V  95.2% (276/290)  IGHV1-46*01  276  ....................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (5/5)     IGHD1-1*01   11   --------------------.....-------------------------------------------------------------  15
J  92.9% (39/42)    IGHJ4*02     7    --------------------------------------------...A...C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_226860

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           304     9e-85
IGHD3-3*01                                                                                            37.2    9e-07
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTACTCGGC	TACGATTTTTGGAGTGGTT	CTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTACTCGGCTACGATTTTTGGAGTGGTTCTCGACTAC	ARGYSATIFGVVLDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	218	24	0	90.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  F  S  G  D  S  T  S  G  H  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9902   1    ACCCTGTCCCTCACCTGCACTTTCTCTGGAGACTCCACCAGTGGTCACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.1% (218/242)  IGHV4-59*01  49   .....................G.......T.G.....T....A..T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  T  G  S  T  T  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  A  S  R  N 
                    Query_9902   91   TGGATTGGCTATGTCTATTATACTGGGAGCACCACGTACAACCCCTCCCTCGAGAGTCGAGTCACCATGTCAGTGGACGCGTCCAGGAAC  180
V  90.1% (218/242)  IGHV4-59*01  139  ........G...A.......C.G...........AC...............A................A.....A...A......A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  Y  S  A  T  I  F  G  V 
                    Query_9902   181  CAGTTCTCCCTGAAGTTAAAGTCTGTGACCGCTGCGGACACGGCCGTTTATTATTGTGCGAGGGGCTACTCGGCTACGATTTTTGGAGTG  270
V  90.1% (218/242)  IGHV4-59*01  229  ...............C.G.GC..........................G.....C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (19/19)   IGHD3-3*01   5    --------------------------------------------------------------------------................  20

                                      ----------->                                  
                                       V  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9902   271  GTTCTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (19/19)   IGHD3-3*01   21   ...-------------------------------------------  23
J  100.0% (40/40)   IGHJ4*02     9    ------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_168499

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           353     9e-100
IGHD3-16*01                                                                                           10.3    115   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGAAAGA	GGGGG	CTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC	ARDQKEGAPDY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	235	9	0	96.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_9903   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  96.3% (235/244)  IGHV4-59*01  50   .....TCC...A....C.........................G...............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  F  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_9903   94   GGATTGGGTATATCTTTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  96.3% (235/244)  IGHV4-59*01  140  ...............A..........................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  K  E  G  A  P  D  Y  
                    Query_9903   184  AATTCTCCCTGAAACTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCAGAAAGAGGGGGCTCCTGACTACT  273
V  96.3% (235/244)  IGHV4-59*01  230  .G...........G..................................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (5/5)     IGHD3-16*01  18   -------------------------------------------------------------------------.....------------  22
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9903   274  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_168498

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           422     2e-120
IGHD2-2*02                                                                                            19.9    0.18  
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAAAGTGGCGGGGA	ACCAGCTGTTATA	AAGAGCGCTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCC	ARGKWRGTSCYKERCWFDP	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	279	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  S  N  Y
                    Query_9904   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTAGCAACTA  90
V  96.9% (279/288)  IGHV5-51*03  6    .................................................................G...........G.....C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  R  Y  R  P
                    Query_9904   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATAATCTATCCTGGTGACTCTGAGACCAGATACAGACC  180
V  96.9% (279/288)  IGHV5-51*03  96   ........G.............................................C....................T...........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_9904   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (279/288)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  G  K  W  R  G  T  S  C  Y  K  E  R  C  W  F  D  P  W  G  Q  G  T  L  V
                    Query_9904   271  CATGTATTATTGTGCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  360
V  96.9% (279/288)  IGHV5-51*03  276  .........C........------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  92.3% (12/13)    IGHD2-2*02   17   ----------------------------------........C....-------------------------------------------  29
J  100.0% (47/47)   IGHJ5*02     5    ---------------------------------------------------------.................................  37

                                                    
                                        T  V  S  S  
                    Query_9904   361  CACCGTCTCCTCAG  374
J  100.0% (47/47)   IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_335026

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           297     8e-83
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCACCGGTGG	AGCAATGGCTGG	GGAACATACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCACCGGTGGAGCAATGGCTGGGGAACATACTATAATTACGGTATGGACGCC	ARGHRWSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	21	3	6	70
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	221	21	6	89.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  T  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_9905   1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGCCCTTCACTGACAGTGGTTATTATTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  89.1% (221/248)  IGHV4-34*12  49   .......................C..T......T......------.......C..C....G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  I  D  T  S 
                    Query_9905   91   CTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAACCCGTCCCTCCAGAGTCGAGTCACCATATCAATAGACACGTCC  180
V  89.1% (221/248)  IGHV4-34*12  133  .....G.............T.......AG.....G......................A....................G...........  222
                                       L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  W  S  N  G 
                    Query_9905   181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGGGGCCACCGGTGGAGCAATGGC  270
V  89.1% (221/248)  IGHV4-34*12  223  ....................GC............C........................C........----------------------  290
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_9905   271  TGGGGAACATACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  93.8% (45/48)    IGHJ6*02     15   ------------------.............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_335027

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9906   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_9906   91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_9906   181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9906   271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_335020

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            420     7e-120
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	274	5	0	98.2


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_9907  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  98.2% (274/279)  IGHV6-1*01  26   ...........................................................G......G....AG.................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_9907  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.2% (274/279)  IGHV6-1*01  116  ..........................................................................................  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_9907  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.2% (274/279)  IGHV6-1*01  206  ..............A...........................................................................  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------CDR3-IMGT--------->                                  
                                     C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9907  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  98.2% (274/279)  IGHV6-1*01  296  .........---------------------------------------------------------  304
                                     C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02    4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_335021

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            422     2e-120
IGHD3-9*01                                                                                            18.0    0.66  
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGTCAT	TTACGATAT	ACGGGCCGGGT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTCATTTACGATATACGGGCCGGGTCTGGTTCGACCCC	ARGGHLRYTGRVWFDP	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                     <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  P  G  Y  T  F  T  D  Y
                    Query_9908  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTCCTGGATACACCTTCACCGACTA  90
V  96.6% (280/290)  IGHV1-2*04  6    ..................G................................................T..................G...  95
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                     ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  K  Y  A  Q
                    Query_9908  91   CTATGTGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAACCCTAACAGTGGTGGCACAAAGTATGCACA  180
V  96.6% (280/290)  IGHV1-2*04  96   ....A..............................................A.............................C........  185
                                       Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                     ------------------------------------------FR3-IMGT----------------------------------------
                                       K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  N  R  L  R  S  D  D  T  A
                    Query_9908  181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAACTGAACAGACTGAGATCTGACGACACGGC  270
V  96.6% (280/290)  IGHV1-2*04  186  ............................................................G....G...G....................  275
                                       K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                     ------------><-------------------CDR3-IMGT------------------>                             
                                       V  Y  Y  C  A  R  G  G  H  L  R  Y  T  G  R  V  W  F  D  P  W  G  Q  G  D  L  V  T  V  S
                    Query_9908  271  CGTATATTACTGTGCGAGAGGGGGTCATTTACGATATACGGGCCGGGTCTGGTTCGACCCCTGGGGCCAGGGAGACCTGGTCACCGTCTC  360
V  96.6% (280/290)  IGHV1-2*04  276  ...G................----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                        
D  100.0% (9/9)     IGHD3-9*01  4    ----------------------------.........-----------------------------------------------------  12
J  95.7% (45/47)    IGHJ5*02    5    ------------------------------------------------.........................AC...............  46

                                          
                                       S  
                    Query_9908  361  CTCAG  365
J  95.7% (45/47)    IGHJ5*02    47   .....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_335022

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           339     2e-95
IGHD5-18*01                                                                                           27.6    8e-04
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCTACCGGAA	GTGGATACAACTATGGT	AAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCTACCGGAAGTGGATACAACTATGGTAATAACTGGTTCGACCCG	ARDPTGSGYNYGNNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  A  S  V  S  H  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_9909   1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGCCTCCGTCAGTCATTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  94.3% (231/245)  IGHV4-59*02  49   ...................C...........G..........AG.........................C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  G  G  I  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_9909   91   TGGATTGGATATATCTATTACGGGGGGATCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*02  139  ........G............A.T....G...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  Y 
                    Query_9909   181  CAGTTCTCCCTGAGGCTGAGCTCTCTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGACCCTACCGGAAGTGGATACAACTAT  270
V  94.3% (231/245)  IGHV4-59*02  229  .............A..........G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD5-18*01  1    ----------------------------------------------------------------------------.........G....  14

                                      -------------------->                                  
                                       G  N  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9909   271  GGTAATAACTGGTTCGACCCGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  94.1% (16/17)    IGHD5-18*01  15   ...----------------------------------------------------  17
J  98.0% (48/49)    IGHJ5*02     3    ------..............C..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_81154

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            420     7e-120
IGHJ3*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	274	5	0	98.2


Alignments

                                     <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_9910  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  98.2% (274/279)  IGHV6-1*01  26   ...........................................................G......G....AG.................  115
                                        G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                     -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_9910  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.2% (274/279)  IGHV6-1*01  116  ..........................................................................................  205
                                     I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                     -------------------------------FR3-IMGT---------------------------------------------------
                                     S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_9910  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.2% (274/279)  IGHV6-1*01  206  ..............A...........................................................................  295
                                     S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                     -><----------CDR3-IMGT--------->                             
                                     C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S
                    Query_9910  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTC  331
V  98.2% (274/279)  IGHV6-1*01  296  .........----------------------------------------------------  304
                                     C  A  R                                                      
J  97.6% (41/42)    IGHJ3*02    4    -------------------....T.....................................  45


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_290178

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           307     1e-85
IGHD3-3*01                                                                                            10.3    119  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGACACAG	TTTTT	AGTTTCCAC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACACAGTTTTTAGTTTCCACTTCGACCCC	ARVDTVFSFHFDP	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  F  F  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_9911   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGCGGTAGTTTCTTTTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  89.2% (223/250)  IGHV4-61*01  49   .........................................C..T.......A..AC....G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  A  Y  I  S  Y  S  G  R  T  K  S  N  P  S  L  K  S  R  V  T  M  S  I  D  T  S 
                    Query_9911   91   CTGGAATGGCTTGCCTATATCTCTTACAGTGGGAGAACCAAGTCTAATCCCTCTCTCAAGAGTCGAGTCACTATGTCAATAGACACGTCC  180
V  89.2% (223/250)  IGHV4-61*01  139  .....G...A...GG.......A............C.....C.AC..C.....C.................C..A...G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  V  D  T  V  F  S  F 
                    Query_9911   181  AAGAACCAATTCTCCCTGAGGCTGACTTCCGTGACCGCTGCGGACACGGCCGTTTATTTCTGTGCGAGAGTGGACACAGTTTTTAGTTTC  270
V  89.2% (223/250)  IGHV4-61*01  229  ........G..........A.....GC..T.......................G....A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-3*01   10   -------------------------------------------------------------------------------.....------  14

                                      ----------->                                  
                                       H  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9911   271  CACTTCGACCCCTGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ5*02     9    ---.......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_290179

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            41.1    7e-08 
IGHJ2*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATTGGC	GTATTACGATTTTCGGAGTGGTTA	CCCCTCGG	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATTGGCGTATTACGATTTTCGGAGTGGTTACCCCTCGGGGTACTTCGATCTC	ARGLAYYDFRSGYPSGYFDL	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  S  W  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9912   1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTTGGTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.2% (243/250)  IGHV4-31*03  49   ...........................G..G.C..................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  T 
                    Query_9912   91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGACT  180
V  97.2% (243/250)  IGHV4-31*03  139  .......................................................................................T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  H  C  A  R  G  L  A  Y  Y  D  F 
                    Query_9912   181  AAGAACCAGTTCTCCCTGAAGCTGAGTTCTGTGACTGCCGCGGACACGGCCGTGTATCACTGTGCGAGAGGATTGGCGTATTACGATTTT  270
V  97.2% (243/250)  IGHV4-31*03  229  ..........................C..............................T............--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.8% (23/24)    IGHD3-3*01   1    -----------------------------------------------------------------------------.............  13

                                      DR3-IMGT------------------------>                                  
                                       R  S  G  Y  P  S  G  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_9912   271  CGGAGTGGTTACCCCTCGGGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  337
D  95.8% (23/24)    IGHD3-3*01   14   T..........--------------------------------------------------------  24
J  100.0% (48/48)   IGHJ2*01     6    -------------------................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_168493

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           308     4e-86
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGGGAA	AACGAC	TGGGATCGTAGGTGGTCCGGT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGGGAAAACGACTGGGATCGTAGGTGGTCCGGTTTTCACTCC	ASRENDWDRRWSGFHS	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	219	22	0	90.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_9913   4    CCCTGAGACTCTCCTGTACCGTCTCTGGTGGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  90.9% (219/241)  IGHV4-59*08  50   .....TCC...A....C..T......................G...............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      L  I  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S  R  N  
                    Query_9913   94   TGATTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGTCGACTCACCATCTCAGTAGACACGTCGAGGAACC  183
V  90.9% (219/241)  IGHV4-59*08  140  G......G...A........A........A.....................A.......G.......A..............C.A.....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  S  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  N  D  W  D  R  R  W  
                    Query_9913   184  AGTTCTCCCTGAGCGTGAACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCGAGCCGGGAAAACGACTGGGATCGTAGGTGGT  273
V  90.9% (219/241)  IGHV4-59*08  230  ............AGC...G.........C................................-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (6/6)     IGHD1-1*01   12   --------------------------------------------------------------------......----------------  17

                                      ------------->                                  
                                      S  G  F  H  S  W  G  P  G  T  L  V  T  V  S  S  
                    Query_9913   274  CCGGTTTTCACTCCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  321
J  93.0% (40/43)    IGHJ4*02     6    -----...G...A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_81158

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	N/A	CGTTGGGGGG	GCTGTCTTTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCGTTGGGGGGGCTGTCTTTGGACGGTATGGACGTC	AKALGGLSLDGMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  E  F  T  F  S  N  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9914   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGAATTCACCTTTAGCAACTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-23*01  47   ..............................G..............G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  F  S  G  P  L  T  S  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9914   91   AGTGGGTCTCAGGATTTAGTGGTCCTCTTACTAGCACATACTTCGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-23*01  137  ............CTA........AG.GG.GG...........A...............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  L  G  G  L  S  L  
                    Query_9914   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTATTGTGCGAAAGCGTTGGGGGGGCTGTCTTTGG  270
V  94.4% (235/249)  IGHV3-23*01  227  ..........................................................C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (9/10)     IGHD3-16*01  13   ---------------------------------------------------------------------....T.....-----------  22

                                      ------------->                                 
                                      D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9914   271  ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  100.0% (47/47)   IGHJ6*02     16   ...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_168495

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            355     3e-100
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	23	1	0	95.8
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	24	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	233	230	3	0	98.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 
                    Query_9915   13   TGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATA  102
V  98.7% (230/233)  IGHV3-7*01   64   ..........................T...............................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  G  N  A  K  N  S  L  Y  L 
                    Query_9915   103  AAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGGCAACGCCAAGAACTCACTGTATCTG  192
V  98.7% (230/233)  IGHV3-7*01   154  .................................................T..............A.........................  243
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-----------------------CDR3-IMGT------------
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  I  D  Y  Y  Y  Y 
                    Query_9915   193  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTAC  282
V  98.7% (230/233)  IGHV3-7*01   244  .....................................................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------..........---------------  26
J  94.9% (56/59)    IGHJ6*02     4    ----------------------------------------------------------------------------.......C..C...  17

                                      ----------->                                 
                                       G  M  D  V  W  G  Q  G  T  T  V  P  V  S  S 
                    Query_9915   283  GGTATGGACGTCTGGGGCCAAGGGACCACGGTCCCCGTCTCCTCA  327
J  94.9% (56/59)    IGHJ6*02     18   .................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_335029

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            322     2e-90
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ6*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAGG	ATTACTATGATAGAAGT	CGTCACGACGAATT	CGGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCAGGATTACTATGATAGAAGTCGTCACGACGAATTCGGTCTGGACGTC	ARDQDYYDRSRHDEFGLDV	247	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	132	27	17	4	6	63
FR3-IMGT	133	246	114	110	4	0	96.5
CDR3-IMGT (germline)	247	254	8	8	0	0	100
Total	N/A	N/A	254	232	16	6	91.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  D  S  F  S  S  D  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9916   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCATTCAGCAGCGATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  91.3% (232/254)  IGHV4-4*02   49   ..................G............G...CA.......TAG.......................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><--------CDR2-IMGT--------><-----------------------------------------------
                                       E  W  I  G  E  V  F  D  S  D  S  G  S  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K 
                    Query_9916   91   GAGTGGATTGGGGAAGTCTTTGATAGTGATAGTGGGAGCGCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAG  180
V  91.3% (232/254)  IGHV4-4*02   139  ...............A...A.C....------.......A..................................................  222
                                       E  W  I  G  E  I  Y  H  S        G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K 

                                      -----FR3-IMGT----------------------------------------------------><-----------------------
                                       S  N  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  D  Y  Y  D 
                    Query_9916   181  TCCAACAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGAGAGACCAGGATTACTATGAT  270
V  91.3% (232/254)  IGHV4-4*02   223  .....G................A.....G...........................G.................----------------  296
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                   
D  94.1% (16/17)    IGHD3-22*01  3    -------------------------------------------------------------------------------...........  13

                                      CDR3-IMGT----------------------->                                 
                                       R  S  R  H  D  E  F  G  L  D  V  W  G  P  G  T  T  V  A  V  S  S 
                    Query_9916   271  AGAAGTCGTCACGACGAATTCGGTCTGGACGTCTGGGGCCCAGGGACCACGGTTGCCGTCTCCTCA  336
D  94.1% (16/17)    IGHD3-22*01  14   ..T...------------------------------------------------------------  19
J  91.3% (42/46)    IGHJ6*02     17   --------------------....A...............A............CA...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_168497

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD6-19*01                                                                                           12.2    30   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTGGC	GGCTGG	CTTAC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTGGCGGCTGGCTTACGGACGTC	TRGGGWLTDV	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9917   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAGTGGTTTCTACTGGAGCTGGATTCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   .............................T............A...A...............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  H  Y  S  G  H  T  N  Y  N  P  S  L  R  S  R  V  I  I  S  L  D  T  S  N  N 
                    Query_9917   91   TGGATTGGGAATATCCACTACAGTGGGCACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCATCATATCGCTGGACACGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  .........T.....T.T.........AG.......................A...........C......AG.A...........G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  I  S  L  K  V  N  S  G  T  A  A  D  T  A  L  Y  Y  C  T  R  G  G  G  W  L  T  D  V  W 
                    Query_9917   181  CAGATCTCCCTGAAGGTGAACTCTGGGACCGCTGCGGACACGGCCCTCTATTATTGTACGAGAGGTGGCGGCTGGCTTACGGACGTCTGG  270
V  90.6% (221/244)  IGHV4-59*01  229  ...T...........C...G.....T...................G.G.....C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  13   ---------------------------------------------------------------------......---------------  18
J  100.0% (40/40)   IGHJ6*02     23   --------------------------------------------------------------------------------..........  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_9917   271  GGCCAAGGGACCACGGTCACCGTCTCCTCA  300
J  100.0% (40/40)   IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_168496

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-10*01                                                                                           10.3    114  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGCCGTCA	GGGGA	CC	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGCCGTCAGGGGACCGGTTCGACCCC	ARWPSGDRFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  P  Y  Y  W  G  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_9918   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGACCTTACTACTGGGGCTGGATCCGGCAGACCCCGGGGAAGGGACTGGAG  90
V  93.8% (228/243)  IGHV4-59*01  49   .........................................TAG..........A..............C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  P  K  N 
                    Query_9918   91   TGGATTGGGTATATCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGCCCAAGAAC  180
V  93.8% (228/243)  IGHV4-59*01  139  ...............T.................................................................T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  R  V  T  S  M  N  A  A  D  T  A  V  Y  Y  C  A  R  W  P  S  G  D  R  F  D  P 
                    Query_9918   181  CAGTTCTCCCTCAGGGTGACCTCTATGAACGCTGCGGACACGGCCGTTTATTACTGTGCGAGATGGCCGTCAGGGGACCGGTTCGACCCC  270
V  93.8% (228/243)  IGHV4-59*01  229  ...........G.A.C...G....G...C..................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-10*01  16   ------------------------------------------------------------------------.....-------------  20
J  100.0% (45/45)   IGHJ5*02     7    -------------------------------------------------------------------------------...........  17

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9918   271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (45/45)   IGHJ5*02     18   ..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_288562

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           377     1e-106
IGHD6-25*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGACA	A	AGCAGCG	CTGGCAGGCCCAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACAAAGCAGCGCTGGCAGGCCCAAATACGGTATGGACGTC	AGQSSAGRPKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	266	25	0	91.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  R  S  S  G  Y  D  F  L  D  Y
                    Query_9919   1    GCAGCTGGTGCAGTCTGGAGCAGAGCTAAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGAGTTCTGGGTACGACTTTCTCGACTA  90
V  91.4% (266/291)  IGHV5-51*01  6    .........................G.G..A.....C.........................A.G.......A...AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_9919   91   CTGGATCGTCTGGGTGCGCCAAATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGTCC  180
V  91.4% (266/291)  IGHV5-51*01  96   ........G............G..........................................................G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  R  G  L  K  A  S  D  P  A
                    Query_9919   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGCGCGGTCTGAAGGCCTCGGACCCCGC  270
V  91.4% (266/291)  IGHV5-51*01  186  .............................C...............C..................A..A.C...............A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  Y  C  A  G  Q  S  S  A  G  R  P  K  Y  G  M  D  V  W  G  Q  G  T  T  V  S  V  S  S
                    Query_9919   271  CAAGTATTACTGTGCGGGACAAAGCAGCGCTGGCAGGCCCAAATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCTCCGTCTCCTC  360
V  91.4% (266/291)  IGHV5-51*01  276  ..T.............A....---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------....................................A..........  61

                                       
                                       
                    Query_9919   361  A  361
J  97.9% (47/48)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_288561

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           318     6e-89
IGHD6-6*01                                                                                            10.3    122  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCGGCCGCAATGT	GCTCG	CCCAAGACAGGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAAAGTCGGCCGCAATGTGCTCGCCCAAGACAGGTACTACTTTGACTAC	TKVGRNVLAQDRYYFDY	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	24	18	3	3	75
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	249	228	18	3	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  L  G  T  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9920   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCCGGATTCACACTTGGCACCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-23*01  47   .....................C......T........CT..A...G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  G  G  S  G  T     T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9920   91   AGTGGGTCTCAACCATTGGTGGTAGTGGTACTA---CATACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAATTCCA  177
V  91.6% (228/249)  IGHV3-23*01  137  ...........G.T...A...........GG..GCA............................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  T  K  V  G  R  N  V  L  A  
                    Query_9920   178  GGAACACCCTGTATCTGCAAATGAACAGCCTGACAGCCGAGGACACGGCCGTATATTATTGTACGAAAGTCGGCCGCAATGTGCTCGCCC  267
V  91.6% (228/249)  IGHV3-23*01  227  A......G.........................G........................C...G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD6-6*01   11   ----------------------------------------------------------------------------------.....---  15

                                      GT-------------------->                                  
                                      Q  D  R  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9920   268  AAGACAGGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (48/48)   IGHJ4*02     1    ---------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_288566

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           299     2e-83
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAGTTAT	CAGGGT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGGCTCCACCCC	ARSGSGSYQGWLHP	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	216	25	0	89.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  D  S  I  S  P  Y  Y  W  I  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_9921   4    CCCTGAGACTCTCCTGTTCTGTCTCTGGTGACTCCATCAGTCCTTACTACTGGATCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  89.6% (216/241)  IGHV4-59*01  50   .....TCC...A....CA............G..........AG...........G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  H  I  F  Y  T  G  S  T  K  Y  K  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  K  
                    Query_9921   94   GGCTTGGCCATATCTTTTACACTGGGAGCACCAAATACAAGCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCCAGGAAGC  183
V  89.6% (216/241)  IGHV4-59*01  140  ..A....GT......A.....G............C.....C..........................A...G............A...C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  H  C  A  R  S  G  S  G  S  Y  Q  G  W  
                    Query_9921   184  AGTTCTCCCTGAAACTGCGTTCTGTGACCGCTGCGGACACGGCCGTGTATCACTGTGCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGGC  273
V  89.6% (216/241)  IGHV4-59*01  230  .............G...A.C..............................T..........-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (15/15)   IGHD3-10*01  11   -----------------------------------------------------------------...............----------  25
J  87.0% (40/46)    IGHJ5*02     6    --------------------------------------------------------------------------------------...T  9

                                      ------->                                  
                                      L  H  P  W  G  L  G  R  L  V  I  V  S  S  
                    Query_9921   274  TCCACCCCTGGGGCCTGGGAAGACTGGTCATCGTCTCCTCAG  315
J  87.0% (40/46)    IGHJ5*02     10   ..G............A.....CC.......C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_288567

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD6-19*01                                                                                           21.8    0.046
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCGGGGCCAACGGGCGGTAAGGCATGC	CAGTGGCTGGT	TCGCGGTTGGGAATCCCAACGGCGATTATTATC	ACGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGGGCCAACGGGCGGTAAGGCATGCCAGTGGCTGGTTCGCGGTTGGGAATCCCAACGGCGATTATTATCACGGGATGGACGTC	ARGRGQRAVRHASGWFAVGNPNGDYYHGMDV	238	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  E  S  F  S  G  Y  F  W  T  W  I  R  Q  P  P  G  T  G  L  E 
                    Query_9922   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGAGTCCTTCAGTGGTTACTTCTGGACTTGGATCCGCCAGCCCCCAGGGACGGGGCTGGAG  90
V  94.7% (232/245)  IGHV4-34*01  49   ...............................G.................A.....GC......................A..........  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  T  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9922   91   TGGATTGGGGAAATAAATCATAGTGGAAGCACCACCTACAGCCCGTCCCTCAAGAGTCGAGTCACCATCTCCGTAGACACGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-34*01  139  ..............C...................A.....A...........................A..A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  G  R  G  Q  R  A  V  R  H 
                    Query_9922   181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCGGACACGGCTCTGTATTATTGTGCGAGAGGCCGGGGCCAACGGGCGGTAAGGCAT  270
V  94.7% (232/245)  IGHV4-34*01  229  ...............C.............................G.......C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      ---------CDR3-IMGT----------------------------------------->                              
                                       A  S  G  W  F  A  V  G  N  P  N  G  D  Y  Y  H  G  M  D  V  W  G  Q  G  T  T  V  R  V  S 
                    Query_9922   271  GCCAGTGGCTGGTTCGCGGTTGGGAATCCCAACGGCGATTATTATCACGGGATGGACGTCTGGGGCCAAGGGACCACGGTCCGCGTCTCG  360
D  100.0% (11/11)   IGHD6-19*01  9    --...........-----------------------------------------------------------------------------  19
J  91.5% (43/47)    IGHJ6*02     16   ----------------------------------------------....T..............................AC......C  59

                                         
                                       S 
                    Query_9922   361  TCA  363
J  91.5% (43/47)    IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_288564

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           14.1    8.4   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGTTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGTTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	240	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  S  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_9923   1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  95.6% (240/251)  IGHV4-61*01  49   ...................C................G........G......A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 
                    Query_9923   91   CTGGAGTGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCC  180
V  95.6% (240/251)  IGHV4-61*01  139  ..............G...A..T...............................................................C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V 
                    Query_9923   181  AAGAACCAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGTTGGAATGGGGTG  270
V  95.6% (240/251)  IGHV4-61*01  229  .....................C....C.......................................A....-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD6-13*01  9    -----------------------------------------------------------------------......C...---------  18

                                      -------------->                                  
                                       D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9923   271  GACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_288565

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-19*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCG	GCAGTGGCTGGTAC	GGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCGGCAGTGGCTGGTACGGGATTGACTAC	AKDRGSGWYGIDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_9924   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGCTGGATCCGGCAGACCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   .............................................T.......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_9924   91   TGGATTGGGTATATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ....................C...................................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  D  R  G  S  G  W  Y  G  I 
                    Query_9924   181  CAGTTCTCCCTGAGGCTGAACTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAAAGATCGCGGCAGTGGCTGGTACGGGATT  270
V  96.7% (237/245)  IGHV4-59*01  229  .............A.....G...........................G.............G...-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (14/14)   IGHD6-19*01  8    ----------------------------------------------------------------------..............------  21
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_9924   271  GACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  310
J  97.6% (41/42)    IGHJ4*02     9    ...................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_290569

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           408     4e-116
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGCA	TATTACTATGATAGTAGT	ATTTATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGCATATTACTATGATAGTAGTATTTATCTTGACTAC	ARAAYYYDSSIYLDY	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	69	6	0	92
CDR1-IMGT	79	102	24	18	6	0	75
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	112	2	0	98.2
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	295	278	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  R  T  S  R  D  S  F  T 
                    Query_9925   4    CAGATGCAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCTGGGGCCTCGGTGAAGGTCTCCTGCAGGACTTCTCGTGACTCCTTTACC  93
V  94.2% (278/295)  IGHV1-18*01  1    ...G.T....................T.......................A................A.G.....G..T..A........  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  H  G  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  N  T  N  Y 
                    Query_9925   94   AACCATGGATTTAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAAACTAT  183
V  94.2% (278/295)  IGHV1-18*01  91   .G.T....TA.C......................................................G.......................  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_9925   184  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  273
V  94.2% (278/295)  IGHV1-18*01  181  .........C................................................................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  R  A  A  Y  Y  Y  D  S  S  I  Y  L  D  Y  W  G  Q  G  T  L  V  T  V 
                    Query_9925   274  ACGGCCGTTTATTACTGTGCGAGAGCCGCATATTACTATGATAGTAGTATTTATCTTGACTACTGGGGCCAGGGAACCCTCGTCACCGTC  363
V  94.2% (278/295)  IGHV1-18*01  271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (18/18)   IGHD3-22*01  2    ------------------------------..................------------------------------------------  19
J  97.6% (41/42)    IGHJ4*02     7    -------------------------------------------------------.........................G.........  41

                                             
                                       S  S  
                    Query_9925   364  TCCTCAG  370
J  97.6% (41/42)    IGHJ4*02     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_288568

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9926   1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T..........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  R  S  E 
                    Query_9926   91   GAGTGGATTGGGGAGATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCAAGTCTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ..............A....A..A..............A...................AG............A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  M  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_9926   181  AACCAGTTCTCCCTGATGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................A.....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  95.7% (44/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9926   271  GACGTCTGGGGCCAAGGGACCACAGTCACCGTCTCCTCA  309
J  95.7% (44/46)    IGHJ6*02     24   .......................G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_288569

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           416     2e-118
IGHD6-19*01                                                                                           12.2    36    
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	TCGGCCTTACG	AGCAGAGGC	CTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATCGGCCTTACGAGCAGAGGCCTTTTTGACTTC	AIGLTSRGLFDF	292	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	70	1	0	98.6
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	111	3	0	97.4
CDR3-IMGT (germline)	292	295	4	4	0	0	100
Total	N/A	N/A	288	277	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  V  S  C  K  G  S  G  F  S  F  S  S  
                    Query_9927   8    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGGTCTCCTGTAAGGGTTCTGGATTCAGCTTTAGCAGCT  97
V  96.2% (277/288)  IGHV5-51*03  5    .....................................................A.....................A........C.....  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  G  V  D  S  E  T  R  Y  S  
                    Query_9927   98   ATTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATGGTGTTGACTCTGAGACCAGATACAGCC  187
V  96.2% (277/288)  IGHV5-51*03  95   .C............................................................CC..G.........T.............  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  L  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  
                    Query_9927   188  CGTCCCTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCAGACCCCG  277
V  96.2% (277/288)  IGHV5-51*03  185  .....T............................................................................G...A...  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-------------CDR3-IMGT------------>                                  
                                      A  M  Y  Y  C  A  I  G  L  T  S  R  G  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9927   278  CCATGTATTACTGTGCGATCGGCCTTACGAGCAGAGGCCTTTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  361
V  96.2% (277/288)  IGHV5-51*03  275  ..................------------------------------------------------------------------  292
                                      A  M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-19*01  7    -----------------------------.....T...----------------------------------------------  15
J  97.7% (42/43)    IGHJ4*02     6    -----------------------------------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_33491

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     5e-96
IGHD6-19*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAGATATCTCC	TAGCAGTGGCTGGT	CAACACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGATATCTCCTAGCAGTGGCTGGTCAACACCTCTATTTGACTAC	ARQISPSSGWSTPLFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  T  Y  T  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_9928   1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTACCTATACCATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (233/248)  IGHV3-21*01  47   ....................G........................G.....G....A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  S  F  I  N  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9928   91   AGTGGGTCTCATCCATCAGTAGTAGAGGTAGTTTCATAAATTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (233/248)  IGHV3-21*01  137  ................T........TA......A....T.C............G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  I  S  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  S  S  G  
                    Query_9928   181  AGAACTCACTGTATCTGCAAATAAGCAGCCTGAGAGGCGAGGACACGGCTGTTTATTACTGTGCGAGACAGATATCTCCTAGCAGTGGCT  270
V  94.0% (233/248)  IGHV3-21*01  227  ......................G.A...........C...............G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD6-19*01  6    -------------------------------------------------------------------------------...........  16

                                      GT-------------------->                                  
                                      W  S  T  P  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9928   271  GGTCAACACCTCTATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (14/14)   IGHD6-19*01  17   ...------------------------------------------------------  19
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_211798

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           329     3e-92
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GGGGCCTTCAA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCTTCAAGATGCTTTGGATATC	ARGGLQDALDI	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	228	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  A  Y  F  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9929   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGCGCCTACTTCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTAG  90
V  92.7% (228/246)  IGHV3-53*01  47   ...........................................TAG.A...A.....G...........................G..G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  I  M  Y  T  G  G  F  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  N  
                    Query_9929   91   AGTGGGTCTCAATTATGTATACCGGTGGATTCACATACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAACA  180
V  92.7% (228/246)  IGHV3-53*01  137  ...........G....T....G......TAG............A............................................G.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  L  Q  D  A  L  D  
                    Query_9929   181  ACACCCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAGAGGGGGCCTTCAAGATGCTTTGGATA  270
V  92.7% (228/246)  IGHV3-53*01  227  ....G............................................G................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
J  91.8% (45/49)    IGHJ3*02     2    -----------------------------------------------------------------------------........T....  14

                                      ->                                  
                                      I  W  G  Q  G  T  R  F  T  V  S  S  
                    Query_9929   271  TCTGGGGCCAAGGCACAAGGTTCACCGTCTCTTCAG  306
J  91.8% (45/49)    IGHJ3*02     15   .............G....T.G...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_39498

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           316     2e-88
IGHD3-10*01                                                                                           16.1    2.4  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTAGA	TCGTCGGCTTTCCTCCCCCCGGGCGC	GTTCGGGG	GGGTCTATTATTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCTAGATCGTCGGCTTTCCTCCCCCCGGGCGCGTTCGGGGGGGTCTATTATTTCTACGGTCTGGACGTC	SRSSAFLPPGAFGGVYYFYGLDV	249	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	101	13	0	88.6
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	228	26	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  S  G  S  D  M  N  W  V  R  Q  A  S  G  K  G  L  
                    Query_9930   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGGTTCAGTGGCTCTGATATGAACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  89.8% (228/254)  IGHV3-73*01  47   .........A.....................G....CC.............C....C.................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  H  I  R  S  K  A  N  N  Y  A  T  A  Y  A  E  S  M  K  G  R  F  I  I  S  R  D  
                    Query_9930   91   AGTGGGTTGGCCATATCAGAAGCAAAGCCAACAATTATGCGACTGCCTACGCTGAGTCCATGAAAGGCAGGTTCATCATCTCCAGAGATG  180
V  89.8% (228/254)  IGHV3-73*01  137  ............G...T...........T....G...C.....A..A..T....C...GG...............C..............  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  E  N  T  A  Y  L  Q  M  D  S  L  Q  T  E  D  T  A  V  Y  Y  C  S  R  S  S  A  F  L  
                    Query_9930   181  ACTCAGAGAACACGGCGTATCTACAAATGGACAGCCTACAAACCGAGGACACGGCCGTCTATTACTGTTCTAGATCGTCGGCTTTCCTCC  270
V  89.8% (228/254)  IGHV3-73*01  227  .T...A................G......A.......GA...................G.........A.....----------------  300
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 

                                      --------CDR3-IMGT----------------------------->                                
                                      P  P  G  A  F  G  G  V  Y  Y  F  Y  G  L  D  V  G  G  Q  G  T  T  V  T  V  S  S
                    Query_9930   271  CCCCGGGCGCGTTCGGGGGGGTCTATTATTTCTACGGTCTGGACGTCGGGGGCCAAGGGACCACGGTCACCGTCTCCTC  349
D  100.0% (8/8)     IGHD3-10*01  12   ----------........-------------------------------------------------------------  19
J  95.8% (46/48)    IGHJ6*02     14   -------------------------------.......A........T...............................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_211793

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            441     6e-126
IGHD2-15*01                                                                                           25.7    0.003 
IGHJ5*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTATCGATATA	TAGTGATGGTAGCTGC	GACACGGCAGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTATCGATATATAGTGATGGTAGCTGCGACACGGCAGGACTGGTTCGACCCC	ARGYRYIVMVAATRQDWFDP	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	286	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  Y
                    Query_9931   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGAGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGACTA  90
V  98.6% (286/290)  IGHV1-2*04   6    ..................G....................G..............................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_9931   91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.6% (286/290)  IGHV1-2*04   96   ..........................................................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_9931   181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  98.6% (286/290)  IGHV1-2*04   186  ..........................................................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        V  Y  Y  C  A  R  G  Y  R  Y  I  V  M  V  A  A  T  R  Q  D  W  F  D  P  W  G  Q  G  T  L
                    Query_9931   271  CGTGTATTATTGTGCGAGAGGTTATCGATATATAGTGATGGTAGCTGCGACACGGCAGGACTGGTTCGACCCCTGGGGCCAGGGAACCCT  360
V  98.6% (286/290)  IGHV1-2*04   276  .........C..........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  93.8% (15/16)    IGHD2-15*01  10   --------------------------------.....G..........------------------------------------------  25
J  100.0% (48/48)   IGHJ5*02     4    -----------------------------------------------------------...............................  34

                                                       
                                        V  T  V  S  S  
                    Query_9931   361  GGTCACCGTCTCCTCAG  377
J  100.0% (48/48)   IGHJ5*02     35   .................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_211792

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD5-18*01                                                                                           18.0    0.58 
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCAT	GTGGATACA	ATTCCGT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCATGTGGATACAATTCCGTTACTACGGAATGGACGTC	ARGMWIQFRYYGMDV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	233	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9932   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTATTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (233/242)  IGHV4-59*01  49   ...............................G...............C..C.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  T  S  I  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_9932   91   TGGATTGGGTATATCTTTTACAGTGGGACCTCCATCTACAACCCCTCACTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  96.3% (233/242)  IGHV4-59*01  139  ................A...........G.A...A............C........................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  M  W  I  Q  F  R  Y  Y 
                    Query_9932   181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGGGCATGTGGATACAATTCCGTTACTAC  270
V  96.3% (233/242)  IGHV4-59*01  229  ..............................................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD5-18*01  1    --------------------------------------------------------------------.........-------------  9
J  96.1% (49/51)    IGHJ6*02     12   ------------------------------------------------------------------------------------......  17

                                      ----------->                                 
                                       G  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_9932   271  GGAATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  315
J  96.1% (49/51)    IGHJ6*02     18   ..T..............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_211791

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           293     2e-81
IGHD3-10*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCAT	TGGTTCG	TCAAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGTTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	239	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	11	1	0	91.7
CDR1-IMGT	26	49	24	19	5	0	79.2
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	19	5	0	79.2
FR3-IMGT	125	238	114	103	11	0	90.4
CDR3-IMGT (germline)	239	244	6	6	0	0	100
Total	N/A	N/A	231	209	22	0	90.5


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 
                    Query_9933   14   TGTGCAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATC  103
V  90.5% (209/231)  IGHV3-21*01  64   ...........T............AG...C....GC.....................................................T  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  R  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  G  K  N  S  L  Y  L 
                    Query_9933   104  AGTAGTAGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGGCAAGAATTCACTGTATCTG  193
V  90.5% (209/231)  IGHV3-21*01  154  ........T...AGT......T.C..C..A......G..A..............................C......C............  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><--------------------CDR3-IMGT---------------
                                       Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  S  S  R  P  L  F 
                    Query_9933   194  CAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGTTCGTCAAGACCTCTATTT  283
V  90.5% (209/231)  IGHV3-21*01  244  ......AA...........................G...............---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (7/7)     IGHD3-10*01  10   --------------------------------------------------------------------.......---------------  16
J  97.7% (42/43)    IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9933   284  GACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  323
J  97.7% (42/43)    IGHJ4*02     9    ....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_211790

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-9*01                                                                                            12.2    31   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAG	GACTGG	CTGATTCCTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGACTGGCTGATTCCTTACTACTTTGACTTC	ARAKDWLIPYYFDF	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9934   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*01  49   ........................................................C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  H  S  G  G  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9934   91   TGGATTGGCAATATCTATCACAGTGGGGGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.9% (234/244)  IGHV4-59*01  139  ........GT........T........A..............................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  E  V  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  A  K  D  W  L  I  P  Y  Y 
                    Query_9934   181  CAGTTCTCCCTGGAGGTGAGCTCTGTGACCGCTGCGGACACGGCCATTTATTACTGTGCGAGAGCTAAGGACTGGCTGATTCCTTACTAC  270
V  95.9% (234/244)  IGHV4-59*01  229  ............A..C.............................G.G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-9*01   16   ---------------------------------------------------------------------......---------------  21
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9934   271  TTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    .......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_211797

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           367     6e-104
IGHD1-26*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GTTCCGTAGG	AGTGGGAGCTACTAC	ACTTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGTTCCGTAGGAGTGGGAGCTACTACACTTTGGTACTTTGACTAC	AKGSVGVGATTLWYFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  S  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  E  G  L  
                    Query_9935   1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCAGCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGGAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-23*01  47   ........................C...........C...........................................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  R  S  T  Y  Y  A  D  S  V  K  G  R  F  T  F  S  R  D  N  S  
                    Query_9935   91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTCGCAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCTTCTCCAGAGACAATTCCA  180
V  97.2% (242/249)  IGHV3-23*01  137  .............................G.T.......................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  S  V  G  V  G  A  
                    Query_9935   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAAGGTTCCGTAGGAGTGGGAGCTA  270
V  97.2% (242/249)  IGHV3-23*01  227  ....................................................A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD1-26*01  6    -------------------------------------------------------------------------------...........  16

                                      GT-------------------->                                  
                                      T  T  L  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9935   271  CTACACTTTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (15/15)   IGHD1-26*01  17   ....-----------------------------------------------------  20
J  100.0% (46/46)   IGHJ4*02     3    -----------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_211796

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-3*01                                                                                            10.3    118   
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GCTTG	ACGAT	CGCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGCTTGACGATCGCATACTACTTTGACTAC	ATGLTIAYYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9936   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  T  S  L  D  T  S 
                    Query_9936   91   CTAGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTTACCACATCACTAGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ..G.......................................................A..............T....G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  D  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  L  T  I  A  Y  Y 
                    Query_9936   181  AAGGACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGCTTGACGATCGCATACTAC  270
V  96.4% (241/250)  IGHV4-31*03  229  ...A...............A.................................G.............G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-3*01   6    ---------------------------------------------------------------------------.....----------  10
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9936   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_39493

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            319     2e-89
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTAGTAACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTAGTAACACCTGGTACTCGGGGTTTTGATTCC	AGHLVTPGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	225	21	0	91.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9937   1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  91.5% (225/246)  IGHV4-4*01   49   ........................................G..GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  A  E  I  H  H  G  G  P  T  N  Y  N  P  A  L  E  S  R  V  T  I  S  V  D  K  S  N 
                    Query_9937   91   GAGTGGATAGCGGAAATCCATCATGGTGGACCCACCAACTACAACCCGGCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAC  180
V  91.5% (225/246)  IGHV4-4*01   139  ........T.G.......T.....A....GAG................T.....A..................................G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  S  L  S  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_9937   181  AACCAATTCTCCCTGAGCCTGAGCTCTCTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATCTAGTAACACCTGGTACTCGG  270
V  91.5% (225/246)  IGHV4-4*01   229  .....G..........AG.........G...........................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9937   271  GGTTTTGATTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.3% (41/43)    IGHJ4*02     6    ---.....C.A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_211794

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           274     9e-76
IGHD2-15*01                                                                                           21.8    0.044
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATAGGC	AGTGGTGGTGGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATAGGCAGTGGTGGTGGCTGCTACTTTGACAAC	ARRLGSGVPCTPFRIGSGGGCYFDN	244	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	212	37	0	85.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  P  G  D  S  I  S  S  D  S  F  Y  W  A  W  I  R  Q  S  P  V  K  G 
                    Query_9938   1    ACCCTGTCCCTCACCTGCACTGTTCCCGGTGATTCCATCAGCAGTGACAGTTTCTACTGGGCCTGGATCCGCCAGTCCCCAGTGAAGGGA  90
V  85.1% (212/249)  IGHV4-39*02  49   .......................CT.T....GC............AGT....A........G.............C......G......G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  M  F  N  G  G  R  T  Y  S  N  P  S  L  K  N  R  V  T  I  S  A  D  T  S 
                    Query_9938   91   CTGGAGTGGATAGGGACTATGTTTAATGGTGGACGCACCTATTCCAACCCGTCCCTCAAGAATCGAGTCACCATATCTGCGGACACGTCC  180
V  85.1% (212/249)  IGHV4-39*02  139  ...........T....G...C.A.T..A....GA.......C.A.................G...............C.TA.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       R  N  H  F  S  L  R  L  T  Y  V  T  S  A  D  S  G  V  Y  Y  C  A  R  R  L  G  S  G  V  P 
                    Query_9938   181  AGGAACCACTTCTCCCTGAGGCTGACCTACGTGACCTCCGCAGACAGCGGTGTCTATTACTGTGCGAGACGTCTTGGGTCCGGTGTCCCC  270
V  85.1% (212/249)  IGHV4-39*02  229  .A.................A.....G..CT......G.........CG.C...G...............---------------------  297
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      ------CDR3-IMGT-------------------------------->                                 
                                       C  T  P  F  R  I  G  S  G  G  G  C  Y  F  D  N  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_9938   271  TGTACTCCCTTCCGCATAGGCAGTGGTGGTGGCTGCTACTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  351
D  92.9% (13/14)    IGHD2-15*01  11   ---------------------.........A....----------------------------------------------  24
J  97.8% (45/46)    IGHJ4*02     2    -----------------------------------..........T...................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_315170

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD2-2*01                                                                                            10.3    137   
IGHJ3*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTGAAGTCTTT	TACCA	CCGAG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATATC	ASLKSFTTEDAFDI	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	74	0	0	100
CDR1-IMGT	76	99	24	18	6	0	75
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	292	279	13	0	95.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  
                    Query_9939   2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATTCGACTTTACCA  91
V  95.5% (279/292)  IGHV5-51*01  2    ..............................................................................A.AG........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  S  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  D  D  S  D  T  R  Y  
                    Query_9939   92   CCTCTTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAATGGATGGGGGTCATCTATCCTGATGACTCTGATACCAGATACA  181
V  95.5% (279/292)  IGHV5-51*01  92   G..AC.........................................G.........A............G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  S  A  Y  L  Q  W  G  S  L  K  A  S  D  
                    Query_9939   182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACAGTGCCTACCTGCAGTGGGGCAGCCTGAAGGCCTCGGACA  271
V  95.5% (279/292)  IGHV5-51*01  182  ................................................G..CC...............A.....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  A  S  L  K  S  F  T  T  E  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  
                    Query_9939   272  CCGCCATGTATTACTGTGCGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTT  361
V  95.5% (279/292)  IGHV5-51*01  272  ......................--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (5/5)     IGHD2-2*01   16   ----------------------------------.....---------------------------------------------------  20
J  100.0% (49/49)   IGHJ3*02     2    --------------------------------------------..............................................  47

                                         
                                      S  
                    Query_9939   362  CAG  364
J  100.0% (49/49)   IGHJ3*02     48   ...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_315171

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           419     2e-119
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	CCGCCTCCCCTAGCGACACCGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGCCTCCCCTAGCGACACCGGGTACTTTGACTAC	ARAASPSDTGYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  D  T  F  T  R  Y
                    Query_9940   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGAGACACCTTCACCAGGTA  90
V  96.2% (279/290)  IGHV1-46*01  6    ..................G......................................................T.............C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  S  G  A  T  K  Y  A  Q
                    Query_9940   91   CTTTATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTAGTGGAGCCACAAAATACGCACA  180
V  96.2% (279/290)  IGHV1-46*01  96   ..A................................................................G....TAG.....GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  I  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_9940   181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAATCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  96.2% (279/290)  IGHV1-46*01  186  .................................................G........................................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  A  A  S  P  S  D  T  G  Y  F  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_9940   271  CGTGTATTACTGTGCGAGAGCCGCCTCCCCTAGCGACACCGGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  359
V  96.2% (279/290)  IGHV1-46*01  276  ....................---------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                       
J  97.8% (45/46)    IGHJ4*02     3    -------------------------------------------.................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_315172

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           357     1e-100
IGHD6-13*01                                                                                           21.8    0.041 
IGHJ3*01                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  L  S  G  G  S  I  S  S  G  G  F  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_9941   1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGGCTCCATCAGCAGTGGTGGTTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.6% (239/250)  IGHV4-31*03  49   .....................G..............................A........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_9941   91   CTGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCT  180
V  95.6% (239/250)  IGHV4-31*03  139  .....................T..................A.................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V 
                    Query_9941   181  AAGAACCAATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTA  270
V  95.6% (239/250)  IGHV4-31*03  229  ........G..........A.....GC...............................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD6-13*01  11   ------------------------------------------------------------------------...........-------  21

                                      ----------------->                                  
                                       G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_9941   271  GGCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  98.0% (48/49)    IGHJ3*01     2    ---.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_290568

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           358     4e-101
IGHD2-21*01                                                                                           10.3    125   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GGTGA	AGACCCCGGAGGGCGCC	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGAAGACCCCGGAGGGCGCCTACTTCTCCTATTACGGGATGGACGTC	ARVKTPEGAYFSYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  T  L  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9942   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATACTCTGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (238/247)  IGHV3-21*01  47   ..............................................C....GCA....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  G  S  Y  I  Y  Y  A  D  S  V  N  G  R  F  T  I  S  R  D  N  A  
                    Query_9942   91   AGTGGGTCTCATCCATTAGTAGTAGTGGGAGTTACATATACTACGCAGACTCAGTGAACGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (238/247)  IGHV3-21*01  137  ..........................A.T.............................G...............................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  K  T  P  E  G  A  
                    Query_9942   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTTTATTACTGTGCGAGGGTGAAGACCCCGGAGGGCGCCT  270
V  96.4% (238/247)  IGHV3-21*01  227  ........................................G...........G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  14   -------------------------------------------------------------------.....------------------  18
J  91.7% (55/60)    IGHJ6*02     3    -----------------------------------------------------------------------------------------.  3

                                      IMGT--------------------->                                 
                                      Y  F  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9942   271  ACTTCTCCTATTACGGGATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTCCTCA  329
J  91.7% (55/60)    IGHJ6*02     4    ...A..A...C.....T.................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_315177

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           397     8e-113
IGHD3-10*01                                                                                           12.2    37    
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TCGGGG	TCTTTGGTCCGGCGAACAGGGA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGGGTCTTTGGTCCGGCGAACAGGGATACTTTGACTTC	ARDRGLWSGEQGYFDF	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	102	12	0	89.5
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	275	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  T  E  V  K  K  P  G  S  S  L  K  V  S  C  K  A  S  G  G  A  F  S 
                    Query_9943   3    CAGGTGCAGCTGGTGCAGTCTGGAACTGAGGTGAAGAAGCCTGGGTCCTCGCTGAAGGTCTCCTGCAAGGCTTCTGGAGGCGCCTTCAGC  92
V  92.9% (275/296)  IGHV1-69*01  1    .......................GG..........................G.............................A........  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  A  V  S  W  V  R  Q  A  P  G  H  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  N  Y 
                    Query_9943   93   ACCTATGCTGTCAGCTGGGTGCGACAGGCCCCTGGACACGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACCACAAACTAC  182
V  92.9% (275/296)  IGHV1-69*01  91   .G.......A............................A.........................................AG........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  N  D  F  R  G  R  L  T  I  I  A  D  G  S  T  S  T  A  Y  M  E  L  T  S  L  R  S  E  D 
                    Query_9943   183  GCAAATGACTTCCGGGGCAGACTCACGATTATCGCGGACGGATCCACGAGCACAGCCTACATGGAGCTGACCAGCCTCAGATCTGAGGAC  272
V  92.9% (275/296)  IGHV1-69*01  181  ...C.GA.G....A.......G.........C........A.............................G......G............  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  D  R  G  L  W  S  G  E  Q  G  Y  F  D  F  W  G  Q  G  T  L  V  T 
                    Query_9943   273  ACGGCCGTCTATTATTGTGCGAGAGATCGGGGTCTTTGGTCCGGCGAACAGGGATACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACC  362
V  92.9% (275/296)  IGHV1-69*01  271  ........G.....C...........----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------......----------------------------------------------------------  19
J  97.8% (45/46)    IGHJ4*02     3    ------------------------------------------------------..........A.........................  38

                                                
                                       V  S  S  
                    Query_9943   363  GTCTCCTCAG  372
J  97.8% (45/46)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_315178

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            422     2e-120
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	TCGG	TACTATGGTTCGGGGAGTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGTCGGTACTATGGTTCGGGGAGTTATTACTTTGACTAC	AHSRYYGSGSYYFDY	263	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	30	0	0	100
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	114	0	0	100
CDR3-IMGT (germline)	263	270	8	8	0	0	100
Total	N/A	N/A	270	270	0	0	100


Alignments

                                       <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                         L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R
                     Query_9944   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCG  90
V  100.0% (270/270)  IGHV2-5*01   30   ..........................................................................................  119
                                         L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                       -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                         Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T
                     Query_9944   91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCAC  180
V  100.0% (270/270)  IGHV2-5*01   120  ..........................................................................................  209
                                         Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                       ---------------------FR3-IMGT----------------------------------------------------><-------
                                         I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  S
                     Query_9944   181  CATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAG  270
V  100.0% (270/270)  IGHV2-5*01   210  ..........................................................................................  299
                                         I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                       ----------CDR3-IMGT----------------->                                  
                                         R  Y  Y  G  S  G  S  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_9944   271  TCGGTACTATGGTTCGGGGAGTTATTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  341
D  100.0% (21/21)    IGHD3-10*01  5    ----.....................----------------------------------------------  25
J  100.0% (46/46)    IGHJ4*02     3    -------------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_315179

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD5-18*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGT	TGGATACAACTATGGTTAC	CCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTTGGATACAACTATGGTTACCCTCACTTTGACTAC	ARGVGYNYGYPHFDY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_9945   4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  95.5% (232/243)  IGHV4-59*01  50   .....TCC...A....C.........................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  F  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_9945   94   GGATTGGCTTTATCTATTACACTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGTGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  95.5% (232/243)  IGHV4-59*01  140  .......G.A...........G......C.............................A...............................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  Y  N  Y  G  Y  P  
                    Query_9945   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGGTTGGATACAACTATGGTTACCCTC  273
V  95.5% (232/243)  IGHV4-59*01  230  ...............................T...............................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  94.7% (18/19)    IGHD5-18*01  2    -------------------------------------------------------------------........G..........----  20

                                      ---------->                                  
                                      H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9945   274  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (45/45)   IGHJ4*02     4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_100837

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           402     3e-114
IGHD1-26*01                                                                                           12.2    36    
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCCCTGCGTTCCC	AGTGGG	CCTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGACCCCTGCGTTCCCAGTGGGCCTTTGATGCTATTGATATC	VRPLRSQWAFDAIDI	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	4	2	0	66.7
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  E  N  S  F  T  N  Y
                    Query_9946   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGAAAACAGCTTTACCAACTA  90
V  94.5% (273/289)  IGHV5-51*03  6    .......................................................................G.T............G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  I  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  S  P  G  D  S  D  T  R  Y  S  P
                    Query_9946   91   CTGGATCGGCTGGATACGCCAGATGCCCGGGAAAGGCCTCGAGTGGATGGGGTTCATCTCTCCTGGTGACTCTGATACCAGATACAGCCC  180
V  94.5% (273/289)  IGHV5-51*03  96   .............G.G.......................G............A......A..............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  V  S  A  D  R  S  I  T  T  A  Y  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_9946   181  GTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAGGTCCATCACCACCGCCTACCTGCAGTGGAACAGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (273/289)  IGHV5-51*03  186  ......................A............A........G....................G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  V  R  P  L  R  S  Q  W  A  F  D  A  I  D  I  W  G  Q  G  T  M  V  T  V  S  S
                    Query_9946   271  TGTGTATTACTGTGTGCGACCCCTGCGTTCCCAGTGGGCCTTTGATGCTATTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  360
V  94.5% (273/289)  IGHV5-51*03  276  CA............C.A..-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD1-26*01  6    --------------------------------......----------------------------------------------------  11
J  98.0% (49/50)    IGHJ3*02     1    ------------------------------------------.......T........................................  48

                                        
                                        
                    Query_9946   361  AG  362
J  98.0% (49/50)    IGHJ3*02     49   ..  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_225513

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           438     5e-125
IGHD6-13*01                                                                                           12.2    36    
IGHJ3*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGGAAGCGGGCCGCACA	TGGTAC	GC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGGAAGCGGGCCGCACATGGTACGCCTTTTGATATC	AWKRAAHGTPFDI	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	73	1	0	98.6
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	111	3	0	97.4
CDR3-IMGT (germline)	291	293	3	3	0	0	100
Total	N/A	N/A	290	285	5	0	98.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_9947   4    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  93
V  98.3% (285/290)  IGHV5-51*01  2    ....G.....................................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_9947   94   CCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  183
V  98.3% (285/290)  IGHV5-51*01  92   G.........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_9947   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCGGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  98.3% (285/290)  IGHV5-51*01  182  ...............................A................G.........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  A  I  Y  Y  C  A  W  K  R  A  A  H  G  T  P  F  D  I  W  G  Q  G  T  M  V  S  V  S  S  
                    Query_9947   274  CCGCCATTTATTACTGTGCGTGGAAGCGGGCCGCACATGGTACGCCTTTTGATATCTGGGGCCAGGGGACTATGGTCAGCGTCTCTTCAG  363
V  98.3% (285/290)  IGHV5-51*01  272  .......G............----------------------------------------------------------------------  291
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (6/6)     IGHD6-13*01  16   -------------------------------------......-----------------------------------------------  21
J  93.3% (42/45)    IGHJ3*02     6    ---------------------------------------------...................A.....A.......C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_351143

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTGTACGAGGCGACTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATGTGTACGAGGCGACTCATCAATATAGTGGCTACATGATTAATGACTAC	GKDVYEATHQYSGYMINDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9948   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAAGTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  E  S  G  A  S  T  N  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9948   91   AATGGGTCTCAGGTATCAGTGAGAGCGGTGCTAGCACAAATCACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  .G..........C...T....GT..T....G.......T.CT................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  I  S  L  R  V  E  D  T  A  V  Y  Y  C  G  K  D  V  Y  E  A  T  H  
                    Query_9948   181  AGAACACGCTGTATCTGCAAATGATCAGCCTGAGAGTCGAGGACACGGCCGTATATTACTGTGGGAAAGATGTGTACGAGGCGACTCATC  270
V  94.0% (235/250)  IGHV3-23*01  227  ........................A...........C..........................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9948   271  AATATAGTGGCTACATGATTAATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_351142

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           274     8e-76
IGHD2-15*01                                                                                           12.2    34   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGTGGCGGATGACGGTTGGCGGGGTGGCAGACGCGTGTC	ATTGTA	T	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGTGGCGGATGACGGTTGGCGGGGTGGCAGACGCGTGTCATTGTATTACGGTATGGACGTC	ARGVADDGWRGGRRVSLYYGMDV	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	97	17	0	85.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	210	35	0	85.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  H  C  W  T  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_9949   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTTAGTGGTCACTGCTGGACCTGGATTCGCCAGACACCAGGGAAGGGACTGGAA  90
V  85.7% (210/245)  IGHV4-34*01  49   ......................................C......T...A.....G......C......C.C...........G.....G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  M  N  H  K  G  R  T  T  Y  N  P  S  L  M  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9949   91   TGGATTGGTGAGATGAATCACAAAGGCAGGACGACCTACAACCCGTCGCTAATGAGTCGAGTCACCATCTCAGTGGACACGTCCAAGAAT  180
V  85.7% (210/245)  IGHV4-34*01  139  ........G..A..C.....T.GT..A..C..C.A............C..C.A...............A.....A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  L  S  L  R  L  T  S  L  I  A  A  G  T  A  M  Y  Y  C  A  R  G  V  A  D  D  G  W  R  G 
                    Query_9949   181  CAGCTCTCCCTGAGATTGACCTCTTTAATCGCCGCGGGCACGGCTATGTATTACTGTGCGAGAGGCGTGGCGGATGACGGTTGGCGGGGT  270
V  85.7% (210/245)  IGHV4-34*01  229  ...T.........AGC...G....G.G.C........A.......G...................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      3-IMGT----------------------------->                                 
                                       G  R  R  V  S  L  Y  Y  G  M  D  V  W  G  Q  G  V  T  V  T  V  S  S 
                    Query_9949   271  GGCAGACGCGTGTCATTGTATTACGGTATGGACGTCTGGGGCCAGGGAGTCACGGTCACCGTCTCCTCA  339
D  100.0% (6/6)     IGHD2-15*01  6    --------------......-------------------------------------------------  11
J  91.7% (44/48)    IGHJ6*02     15   ---------------------.......................A..GAC...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_225516

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            332     3e-93
IGHD3-3*01                                                                                            29.5    2e-04
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTC	GTATTACGGTTTCTGGAGTGG	CTACTCGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCGTATTACGGTTTCTGGAGTGGCTACTCGGTTTGACTTC	ATRITVSGVATRFDF	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                     <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                      T  L  S  L  T  C  A  V  S  N  A  S  I  T  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_9950  1    ACCCTGTCCCTCACCTGCGCTGTCTCTAATGCCTCCATCACCAGTTCTAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.4% (228/244)  IGHV4-4*02  49   ...........................GG..G........G....AG...C.......................................  138
                                      T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                     --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                      E  W  I  G  E  I  Y  H  S  G  G  T  N  Y  N  P  S  L  K  T  R  V  T  I  S  L  D  K  S  T 
                    Query_9950  91   GAGTGGATTGGGGAAATCTATCATAGTGGGGGCACCAACTACAACCCGTCCCTCAAGACTCGAGTCACCATATCACTAGACAAGTCTACG  180
V  93.4% (228/244)  IGHV4-4*02  139  ..............................A...........................G................G..........C.A.  228
                                      E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                     R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                      K  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  T  R  I  T  V  S  G  V  A 
                    Query_9950  181  AAGCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCTTATATTACTGTGCGACTCGTATTACGGTTTCTGGAGTGGCT  270
V  93.4% (228/244)  IGHV4-4*02  229  ..C.............A...............................G.G.............--------------------------  292
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  90.5% (19/21)    IGHD3-3*01  1    -------------------------------------------------------------------........A...T........--  21

                                     -------------->                                  
                                      T  R  F  D  F  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_9950  271  ACTCGGTTTGACTTCTGGGGCCAGGGCATCCTGGTCACCGTCTCCTCAG  319
J  93.0% (40/43)    IGHJ4*02    6    ------.......A............A.C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_225517

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           396     2e-112
IGHD6-6*01                                                                                            14.1    9.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTC	ATTREQLVPIFDF	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	294	4	4	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  L  T  
                    Query_9951   4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGCAAGGGCTCTGGATATAGCTTAACCA  93
V  93.5% (272/291)  IGHV5-51*01  2    ..G.............................................................T.....T........C.....T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  V  P  G  K  G  L  E  W  I  G  I  I  Y  P  A  D  S  E  T  K  Y  
                    Query_9951   94   GTTATTGGATCGCCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATTGGGATCATCTATCCTGCTGACTCTGAAACCAAATACA  183
V  93.5% (272/291)  IGHV5-51*01  92   .C..C.......G.............A.........................G................G.........T....G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  S  S  S  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_9951   184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCGGCCGACAAGTCCAGCAGCTCCGCCTTCTTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  93.5% (272/291)  IGHV5-51*01  182  ...............................A.............T....A......A.C..............................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  A  M  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9951   274  CCGCCATGTATTATTGTGCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTCTGGGGGCAGGGAACCCTGGTCACCGTCTCCTCAG  363
V  93.5% (272/291)  IGHV5-51*01  272  .............C.......---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -----------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------.......A......C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_225514

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9952   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (239/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  P  S  K  N 
                    Query_9952   91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACCCGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  ....................................................................A.........A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_9952   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  .............A.............................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9952   271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_351146

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           325     3e-91
IGHD3-10*01                                                                                           46.8    1e-09
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTATGGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATGGTTCGGGGAGTTATTTTGACTTC	ARGLYYYGSGSYFDF	250	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	33	33	26	1	6	78.8
CDR1-IMGT	34	63	30	27	3	0	90
FR2-IMGT	64	114	51	47	4	0	92.2
CDR2-IMGT	115	135	21	21	0	0	100
FR3-IMGT	136	249	114	106	8	0	93
CDR3-IMGT (germline)	250	256	7	7	0	0	100
Total	N/A	N/A	256	234	16	6	91.4


Alignments

                                      <-----------FR1-IMGT------------><----------CDR1-IMGT---------><--------------------FR2-IM
                                       T  L  S  L  T  C  S  V  T  F  S  R  G  S  I  N  S  G  G  H  Y  W  N  W  I  R  Q  P  P  G 
                    Query_9953   1    ACCCTGTCCCTCACCTGCAGTGTCACTTTCTCTCGTGGCTCCATCAACAGTGGTGGTCACTACTGGAACTGGATCCGCCAGCCCCCAGGG  90
V  91.4% (234/256)  IGHV4-31*03  49   ...................C....------...G............G..........T.........G..............A.......  132
                                       T  L  S  L  T  C  T  V        S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  G  L  Q  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D 
                    Query_9953   91   AAGGGCCTGCAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCTTCCCTGAAGAGTCGAGTTACCATGTCAGTAGAC  180
V  91.4% (234/256)  IGHV4-31*03  133  .........G...........T..................................G.....C.................A.........  222
                                       K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-----------------CDR
                                       T  S  R  N  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  G  L  Y  Y  Y 
                    Query_9953   181  ACGTCTAGGAACCAGCTGTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCATTTATTACTGTGCGAGAGGCCTCTATTACTAT  270
V  91.4% (234/256)  IGHV4-31*03  223  .......A.......T.C.......................................G.G................--------------  298
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  100.0% (24/24)   IGHD3-10*01  2    ---------------------------------------------------------------------------------.........  10

                                      3-IMGT----------------->                                  
                                       G  S  G  S  Y  F  D  F  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_9953   271  GGTTCGGGGAGTTATTTTGACTTCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  328
D  100.0% (24/24)   IGHD3-10*01  11   ...............-------------------------------------------  25
J  95.3% (41/43)    IGHJ4*02     6    ---------------.......A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_351149

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           438     5e-125
IGHJ3*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ACCCTCGG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTCGGTGCTCTTGATATC	ARTLGALDI	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	284	4	0	98.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_9954   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTAT  91
V  98.6% (284/288)  IGHV1-18*01  7    ..........................................................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_9954   92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAATTATGCACAG  181
V  98.6% (284/288)  IGHV1-18*01  97   ...................................G.........................C..................C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_9954   182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  98.6% (284/288)  IGHV1-18*01  187  ...C......................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------CDR3-IMGT-------->                                  
                                       V  Y  Y  C  A  R  T  L  G  A  L  D  I  W  G  Q  G  A  M  V  T  V  S  P  
                    Query_9954   272  GTGTATTACTGTGCGAGAACCCTCGGTGCTCTTGATATCTGGGGCCAAGGGGCAATGGTCACCGTCTCTCCAG  344
V  98.6% (284/288)  IGHV1-18*01  277  ..................-------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                        
J  93.6% (44/47)    IGHJ3*02     4    --------------------------....T....................A.................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_351148

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_9955   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.8% (277/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_9955   91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_9955   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9955   271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.8% (277/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_9955   361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_225518

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           324     7e-91
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AACCA	GTACTACTATGATATTAGTGGT	AACCTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAACCAGTACTACTATGATATTAGTGGTAACCTTTTTGACTAC	ARNQYYYDISGNLFDY	233	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	46	30	26	4	0	86.7
FR2-IMGT	47	97	51	50	1	0	98
CDR2-IMGT	98	118	21	20	1	0	95.2
FR3-IMGT	119	232	114	111	3	0	97.4
CDR3-IMGT (germline)	233	238	6	6	0	0	100
Total	N/A	N/A	225	216	9	0	96


Alignments

                                      <F><----------CDR1-IMGT---------><--------------------FR2-IMGT---------------------><-----
                                       S  G  G  S  I  S  N  T  N  Y  Y  W  G  W  V  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y 
                    Query_9956   14   TCTGGAGGCTCCATCAGCAATACTAATTACTACTGGGGCTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTATCTAT  103
V  96.0% (216/225)  IGHV4-39*01  73   .....T.............G..G..G................A...............................................  162
                                       S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y 

                                      CDR2-IMGT-----><----------------------------------------------------FR3-IMGT--------------
                                       Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L 
                    Query_9956   104  TATAGTGGGACCACCACCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTG  193
V  96.0% (216/225)  IGHV4-39*01  163  ..........G....TA.........................................................................  252
                                       Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L 

                                      --------------------------------------><-------------------CDR3-IMGT------------------>   
                                       S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  N  Q  Y  Y  Y  D  I  S  G  N  L  F  D  Y  W 
                    Query_9956   194  AGCTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGCGAGAAACCAGTACTACTATGATATTAGTGGTAACCTTTTTGACTACTGG  283
V  96.0% (216/225)  IGHV4-39*01  253  .............................G...............---------------------------------------------  297
                                       S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                                              
D  90.9% (20/22)    IGHD3-22*01  1    --------------------------------------------------...T..........G.......------------------  22
J  100.0% (43/43)   IGHJ4*02     6    ------------------------------------------------------------------------------............  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_9956   284  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  314
J  100.0% (43/43)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_225519

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           305     3e-85
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGT	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGTGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQCVAGTGHPFDY	239	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	11	1	0	91.7
CDR1-IMGT	26	49	24	18	6	0	75
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	17	7	0	70.8
FR3-IMGT	125	238	114	109	5	0	95.6
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	233	214	19	0	91.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 
                    Query_9957   14   TGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATT  103
V  91.8% (214/233)  IGHV3-21*01  64   ...........TG.....AC........G.T....C......................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_9957   104  AGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAATTCACTGTATCTG  193
V  91.8% (214/233)  IGHV3-21*01  154  ...A.T...A.TAG.....T..A......................................................C............  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------------------CDR3-IMGT----------
                                       Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  C  V  A  G  T  G 
                    Query_9957   194  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGTGTGTGGCTGGTACAGGA  283
V  91.8% (214/233)  IGHV3-21*01  244  .................................G.G.....C...........-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (11/11)   IGHD6-19*01  11   ---------------------------------------------------------------------------...........----  21

                                      -------------->                                  
                                       H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9957   284  CACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  332
J  97.7% (42/43)    IGHJ4*02     6    ------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_138893

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         389     1e-110
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CA	GAGGGGTTAT	CGGTCCACCCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAGAGGGGTTATCGGTCCACCCGTTTGACTAC	ARAEGLSVHPFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	249	0	0	100


Alignments

                                         <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                            S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                     Query_9958     1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  100.0% (249/249)  IGHV3-30-3*01  47   ..........................................................................................  136
                                            S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                         -------------><-------CDR2-IMGT------><---------------------------------------------------
                                         E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                     Query_9958     91   AGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  100.0% (249/249)  IGHV3-30-3*01  137  ..........................................................................................  226
                                         E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                         -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                         K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  E  G  L  S  V  H  
                     Query_9958     181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGCAGAGGGGTTATCGGTCCACC  270
V  100.0% (249/249)  IGHV3-30-3*01  227  .....................................................................---------------------  295
                                         K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)      IGHD3-3*01     16   -----------------------------------------------------------------------...T......---------  25

                                         ---------->                                  
                                         P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_9958     271  CGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (43/43)    IGHJ4*02       6    --...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_322397

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           322     2e-90
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_9959   1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_9959   91   CTAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-61*08  139  ..G..................T..T................C.................G.......TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N 
                    Query_9959   181  AGGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAAC  270
V  91.2% (228/250)  IGHV4-61*08  229  .A.................A.....GC..........................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G..G.....G.  22

                                      3-IMGT----------------------->                                  
                                       C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9959   271  TGCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  86.4% (19/22)    IGHD2-15*01  23   ......----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_198343

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         411     5e-117
IGHD4-17*01                                                                                           18.0    0.65  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTGGG	GGTGACTAC	GACGGGCCTGGTG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTGGGGGTGACTACGACGGGCCTGGTGTTGACCAC	ARLGGDYDGPGVDH	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	276	13	0	95.5


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  A  F  A  N  Y
                    Query_9960     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCTTCTGGATACGCCTTTGCCAACTA  90
V  95.5% (276/289)  IGHV5-10-1*01  6    .................................................................G..........AG....A...G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  D  D  S  Y  T  N  Y  S  P
                    Query_9960     91   CTGGATCAGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTGATGACTCTTACACCAACTACAGCCC  180
V  95.5% (276/289)  IGHV5-10-1*01  96   .........C......................................................AG.........T..............  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  V  S  T  V  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_9960     181  GTCCTTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCGTCAGCACTGTCTACCTCCAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (276/289)  IGHV5-10-1*01  186  ........................................A.........C......G......A.........................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------CDR3-IMGT--------------->                                  
                                          M  Y  Y  C  A  R  L  G  G  D  Y  D  G  P  G  V  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9960     271  CATGTATTACTGTGCGAGACTTGGGGGTGACTACGACGGGCCTGGTGTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  95.5% (276/289)  IGHV5-10-1*01  276  ...................----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                       
D  100.0% (9/9)     IGHD4-17*01    8    -------------------------.........-------------------------------------------------------  16
J  97.6% (41/42)    IGHJ4*02       7    -----------------------------------------------.....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_198340

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           417     6e-119
IGHD6-19*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCCTTAGGGTC	TATAGCAGTGGCTGGTAC	TC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCCTTAGGGTCTATAGCAGTGGCTGGTACTCTTGGCTAC	ARVPLGSIAVAGTLGY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_9961   2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAATTAT  91
V  96.2% (278/289)  IGHV1-18*01  7    .....................................................................................GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  V  F  N  G  N  T  R  H  A  L 
                    Query_9961   92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCAGCGTTTTCAATGGTAACACAAGACATGCACTG  181
V  96.2% (278/289)  IGHV1-18*01  97   ........C.........................................A..........C..A..............ACT......A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  N  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_9961   182  AAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAACACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.2% (278/289)  IGHV1-18*01  187  ...........................................G..............................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  V  P  L  G  S  I  A  V  A  G  T  L  G  Y  W  G  Q  G  T  L  V  I  V  S 
                    Query_9961   272  GTGTATTACTGTGCGAGAGTTCCCTTAGGGTCTATAGCAGTGGCTGGTACTCTTGGCTACTGGGGCCAGGGAACCCTGGTCATTGTCTCC  361
V  96.2% (278/289)  IGHV1-18*01  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (18/18)   IGHD6-19*01  4    --------------------------------..................----------------------------------------  21
J  92.9% (39/42)    IGHJ4*02     7    ----------------------------------------------------...A..........................CC......  44

                                          
                                       S  
                    Query_9961   362  TCAG  365
J  92.9% (39/42)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_198341

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           332     4e-93
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGGACGATAA	GATAATAGTGGTT	GATTCCTCTTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGGACGATAAGATAATAGTGGTTGATTCCTCTTTCTTTGACTTC	ARDPDDKIIVVDSSFFDF	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9962   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACATTCAGTAGTCATGGCATGCACTGGGTCCGACAGGCTCCAGGTAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-30*03  47   .....................................C........CT...................C...........C..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  T  V  I  S  F  D  G  S  Y  K  H  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_9962   91   AATGGGTGACAGTTATATCATTTGACGGAAGTTATAAACACTATGCAGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAGACAATTCCA  180
V  92.4% (231/250)  IGHV3-30*03  137  .G......G............A...T......A.....T..............................C....................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  V  Y  L  Q  M  N  S  L  K  P  E  D  T  A  V  Y  Y  C  A  R  D  P  D  D  K  I  I  
                    Query_9962   181  AGAATACAGTCTATCTGCAAATGAACAGCCTGAAACCTGAGGACACGGCTGTATATTACTGTGCGAGAGATCCGGACGATAAGATAATAG  270
V  92.4% (231/250)  IGHV3-30*03  227  ....C..GC.G......................G.G................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD3-22*01  11   ----------------------------------------------------------------------------------....G...  18

                                      IMGT--------------------->                                  
                                      V  V  D  S  S  F  F  D  F  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_9962   271  TGGTTGATTCCTCTTTCTTTGACTTCTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  330
D  92.3% (12/13)    IGHD3-22*01  19   .....-------------------------------------------------------  23
J  95.5% (42/44)    IGHJ4*02     5    ----------------........A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_198346

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     3e-93
IGHD4-17*01                                                                                           14.1    8.4  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	GAGGGATGACAACCA	TGACTAC	CGGCTTC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGAGGGATGACAACCATGACTACCGGCTTCACTGGTTCTACCCC	VRRDDNHDYRLHWFYP	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	22	2	0	91.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	242	5	4	1	0	80
Total	N/A	N/A	230	221	9	0	96.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  S  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 
                    Query_9963   13   TGTGCAGCCTCTGGATTCAGTTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATT  102
V  96.1% (221/230)  IGHV3-21*01  64   ...................CC........C............................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  S  T  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_9963   103  AGTAGTAGTACTACTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTG  192
V  96.1% (221/230)  IGHV3-21*01  154  ..........G..G............................................................................  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  V  R  R  D  D  N  H  D  Y  R  L  H  W  F  Y 
                    Query_9963   193  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTATATATTATTGTGTGAGGAGGGATGACAACCATGACTACCGGCTTCACTGGTTCTAC  282
V  96.1% (221/230)  IGHV3-21*01  244  .................................G.G.....C....C...----------------------------------------  293
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  100.0% (7/7)     IGHD4-17*01  1    -----------------------------------------------------------------.......------------------  7
J  97.9% (47/48)    IGHJ5*02     4    -------------------------------------------------------------------------------........G..  14

                                      -->                                  
                                       P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9963   283  CCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  97.9% (47/48)    IGHJ5*02     15   .....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_198347

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GAATGAACACTGC	CTGGTAC	TTGCTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGAACACTGCCTGGTACTTGCTTTACTTTGAAGAC	ARMNTAWYLLYFED	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	228	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  E  Y  A  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_9964   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTGAATATGCCATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (228/246)  IGHV3-23*01  47   ...........................................CAGC.........A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  L  S  G  T  G  G  S  T  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_9964   91   AGTGGGTCTCAAGTCTTAGTGGGACTGGTGGTAGCACATACTACCCAGACTCCGTGAAGGGCCGGTTCACCGTGTCCAGAGACAATTCCA  180
V  92.7% (228/246)  IGHV3-23*01  137  ...........GC.A.......T.G...................G..........................A.C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  M  N  T  A  W  Y  L  
                    Query_9964   181  AGAACACTCTGTATCTACAAATGAGCAGCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGAATGAACACTGCCTGGTACTTGC  270
V  92.7% (228/246)  IGHV3-23*01  227  .......G........G.......A...........................A.....C.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ------------->                                  
                                      L  Y  F  E  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9964   271  TTTACTTTGAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  95.7% (44/46)    IGHJ4*02     3    --........CT....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_198344

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	CAGCTA	TACAATTTTTGGAGTGG	ACACATATTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACAGCTATACAATTTTTGGAGTGGACACATATTTCTTTGACTGG	ANSYTIFGVDTYFFDW	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  S  S  C  A  M  S  R  V  R  Q  A  P  G  K  G  L  
                    Query_9965   1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCACCTTTAGCAGCTGTGCCATGAGCAGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.7% (234/247)  IGHV3-23*01  47   .......................G........................A..........T...................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  G  T  T  Y  Y  A  D  P  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9965   91   AGTGGGTCTCAAGTATTAGTGGGAGTGGTGGTACGACATACTACGCAGACCCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAACTCCA  180
V  94.7% (234/247)  IGHV3-23*01  137  ...........GC.........T..........GC...............T.............G....................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  N  S  Y  T  I  F  G  V  
                    Query_9965   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAACAGCTATACAATTTTTGGAGTGG  270
V  94.7% (234/247)  IGHV3-23*01  227  .........................................................A.........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.1% (16/17)    IGHD3-3*01   5    -------------------------------------------------------------------------...G.............  21

                                      T------------------>                                  
                                      D  T  Y  F  F  D  W  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9965   271  ACACATATTTCTTTGACTGGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  95.5% (42/44)    IGHJ4*02     5    ----------........AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_198345

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9966   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_9966   91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_9966   181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_9966   271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_198348

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q 
                    Query_9967   1    ACCCTGTCCCTCACCTGCACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAA  90
V  91.0% (223/245)  IGHV4-59*01  49   ....................T..........................C........C............C.................G.G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_9967   91   TGGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAAC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A....G.....C...T....T....G......C..............C...........C.C.........A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E 
                    Query_9967   181  CAGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAG  270
V  91.0% (223/245)  IGHV4-59*01  229  ...T.........AG..G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  1    -----------------------------------------------------------------------------............-  12

                                      -------------->                                  
                                       D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_9967   271  GATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  319
J  92.5% (37/40)    IGHJ4*02     9    ---------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_198349

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD3-3*01                                                                                            12.2    30   
IGHJ3*01                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCT	TTACGA	GGGGCTAACTTTTCCTT	TCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCTTTACGAGGGGCTAACTTTTCCTTTC	ARDLYEGLTFPF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9968   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTTCTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  91.0% (223/245)  IGHV4-59*01  49   ..........................................AG.....A........................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  N  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  N  S 
                    Query_9968   91   TGGCTAGGATATATCAATTACACTGGGAGTACCAACTACAATCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAACAGC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A.T..G......T......G......C...........C..................G.........................G.A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  E  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  Y  E  G  L  T  F  P 
                    Query_9968   181  CAATTCTCCCTGGAGTTGTCTTCTGTGACCGCTGCGGACACGGCCGTGTACTATTGTGCGAGAGACCTTTACGAGGGGCTAACTTTTCCT  270
V  91.0% (223/245)  IGHV4-59*01  229  ..G.........A..C..AGC.............................T..C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-3*01   4    --------------------------------------------------------------------......----------------  9

                                      -->                                  
                                       F  W  G  P  G  T  M  V  T  V  S  S  
                    Query_9968   271  TTCTGGGGCCCAGGGACAATGGTCACCGTCTCCTCAG  307
J  94.4% (34/36)    IGHJ3*01     15   -.........A.....................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_158585

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            280     1e-77
IGHD4-17*01                                                                                           14.1    8.7  
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TGGGCCTCAGGGCACTC	ACTACGG	GATGTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGGGCCTCAGGGCACTCACTACGGGATGTCCTACTTCTACGGATTGGACGTC	ASGPQGTHYGMSYFYGLDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	18	9	0	66.7
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	18	3	0	85.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	213	34	0	86.2


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  V  V  S  G  G  S  I  S  S  D  R  W  W  N  W  V  R  Q  P  P  G  K  G  
                    Query_9969   1    GGTCCCTGAGACTCTCCTGCGTTGTGTCTGGTGGCTCCATCAGTTCCGACAGGTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  86.2% (213/247)  IGHV4-4*02   47   ..A.....TCC...A......C...C.................CAGTAGT.AC.......G.............................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  V  G  E  V  Y  H  T  G  S  A  N  S  K  P  S  L  E  S  R  V  T  L  S  V  D  K  S  
                    Query_9969   91   TGGAGTGGGTTGGGGAAGTCTATCATACTGGGAGCGCCAACTCCAAGCCGTCCCTCGAGAGTCGAGTCACCTTGTCAGTAGACAAGTCCA  180
V  86.2% (213/247)  IGHV4-4*02   137  ........A........A.........G.......A......A...C.........A..............A.A................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      R  N  T  F  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  G  P  Q  G  T  H  Y  
                    Query_9969   181  GGAACACCTTTTCCCTGAGCCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGTGGGCCTCAGGGCACTCACTACG  270
V  86.2% (213/247)  IGHV4-4*02   227  A....CAG..C.......AG.....C.........................................-----------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD4-17*01  3    ------------------------------------------------------------------------------------......  8

                                      -IMGT----------------------->                                 
                                      G  M  S  Y  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9969   271  GGATGTCCTACTTCTACGGATTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (7/7)     IGHD4-17*01  9    .-------------------------------------------------------------  9
J  94.5% (52/55)    IGHJ6*02     8    -------.....A......TA.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_158586

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           316     2e-88
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTGGTTTG	CGGAGAGCTATTAT	TC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTGGTTTGCGGAGAGCTATTATTCTGACTAC	ARDWFAESYYSDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  P  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9970   1    GGTCCCTGAGACTCTCCTGTGTTGCCTCTGGATTTCCCTTCAGTGACTACAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-21*01  47   .....................CA...........CA........AG...T........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  G  T  S  S  F  K  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9970   91   AGTGGGTCTCATATATTAGTGGCACTAGTAGTTTCAAATCTTACGCAGACTCTGTTAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.4% (226/250)  IGHV3-21*01  137  ............CC......A.T.G........A..T..AC...........A..G..................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  Y  T  V  Y  L  Q  M  N  S  L  R  A  A  D  T  A  V  Y  Y  C  A  R  D  W  F  A  E  S  Y  
                    Query_9970   181  AGTACACGGTGTATCTGCAGATGAACAGCCTGAGAGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGATTGGTTTGCGGAGAGCTATT  270
V  90.4% (226/250)  IGHV3-21*01  227  ..A..T.AC..........A...................A..............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  85.7% (12/14)    IGHD3-10*01  15   ------------------------------------------------------------------------------...G...T....  26

                                      ---------->                                  
                                      Y  S  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_9970   271  ATTCTGACTACTGGGGCCAGGGAATCTTGGTCACTGTCTCCTCAG  315
D  85.7% (12/14)    IGHD3-10*01  27   ..-------------------------------------------  28
J  92.7% (38/41)    IGHJ4*02     8    ----....................C.C.......C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_158587

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     4e-95
IGHD1-1*01                                                                                            12.2    31   
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTAC	AEEKRRVPRGTFHY	237	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	112	2	0	98.2
CDR3-IMGT (germline)	237	244	8	7	1	0	87.5
Total	N/A	N/A	232	224	8	0	96.6


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  I  T  F  T  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  
                    Query_9971   13   GTGCAGCCTCTGGAATCACCTTTACCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCCATTA  102
V  96.6% (224/232)  IGHV3-23*01  65   ..............T.........G..G.........................................................T....  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  K  N  T  L  Y  L  
                    Query_9971   103  GTGGTGGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGAAGAACACGCTGTATCTGC  192
V  96.6% (224/232)  IGHV3-23*01  155  .....A......................................................G.........C...................  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  G  T  F  H  Y  W  
                    Query_9971   193  AAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTACTGGG  282
V  96.6% (224/232)  IGHV3-23*01  245  ...............................................A....--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------......------------------------------  17
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------------------------------------------....G.........  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_9971   283  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.7% (43/44)    IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_158581

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           367     6e-104
IGHD3-3*01                                                                                            39.1    3e-07 
IGHJ6*02                                                                                              114     2e-29 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCA	TATTACGATTTTTGGAGTGG	CGACC	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCATATTACGATTTTTGGAGTGGCGACCATTACTACTACTACTACGCTATGGACGTC	AGPYYDFWSGDHYYYYYAMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	240	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  P  
                    Query_9972   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  98.0% (240/245)  IGHV3-23*01  47   ..............................................C........................................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      G  W  V  S  V  M  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9972   91   GGTGGGTCTCAGTTATGAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  98.0% (240/245)  IGHV3-23*01  137  A...........C...T.........................................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  G  P  Y  Y  D  F  W  S  
                    Query_9972   181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGGGCCATATTACGATTTTTGGAGTG  270
V  98.0% (240/245)  IGHV3-23*01  227  .................................................................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (20/20)   IGHD3-3*01   2    -----------------------------------------------------------------------...................  20

                                      DR3-IMGT-------------------------->                                 
                                      G  D  H  Y  Y  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9972   271  GCGACCATTACTACTACTACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  338
D  100.0% (20/20)   IGHD3-3*01   21   .-------------------------------------------------------------------  21
J  98.4% (61/62)    IGHJ6*02     1    ------..................G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_158582

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           318     6e-89
IGHD3-10*01                                                                                           25.7    0.003
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTTGGGACA	ATGGTTCGGGGAG	CAA	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTGGGACAATGGTTCGGGGAGCAAAACTGGTTCGACCCC	ARHLGQWFGEQNWFDP	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	234	114	95	10	9	83.3
CDR3-IMGT (germline)	235	242	8	8	0	0	100
Total	N/A	N/A	251	229	13	9	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_9973   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  91.2% (229/251)  IGHV4-39*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  F  S  G  S  T  Y  Y  N  P  S  L  E  S  R  V  P  I  S  V          
                    Query_9973   91   CTGGAGTGGATTGGGAGCATCTACTTTAGTGGGAGCACCTACTACAACCCGTCCCTAGAGAGTCGAGTCCCCATATCCGT---------G  171
V  91.2% (229/251)  IGHV4-39*01  139  .................T.....T.A..............................CA...........A..........AGACACGTCC  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  L  Y  P  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  Q  W  F  G 
                    Query_9973   172  AAGAACCTGTACCCCCTGAGGTTGAGGTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATTTGGGACAATGGTTCGGG  261
V  91.2% (229/251)  IGHV4-39*01  229  .......A..T.T......A.C....C............................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD3-10*01  9    --------------------------------------------------------------------------------..........  18

                                      GT------------------>                                  
                                       E  Q  N  W  F  D  P  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_9973   262  GAGCAAAACTGGTTCGACCCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  316
D  100.0% (13/13)   IGHD3-10*01  19   ...----------------------------------------------------  21
J  98.0% (48/49)    IGHJ5*02     3    ------............................C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_96661

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           12.2    32    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	GTCAAGAGAC	CTATGG	CCTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGTCAAGAGACCTATGGCCTCACTACTTTGACCAC	ARESRDLWPHYFDH	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_9974   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTACGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-48*03  47   ........................................C........T........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  S  S  G  S  I  I  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_9974   91   AGTGGGTTTCACATATTAGTAGTAGTGGTAGTATCATACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  96.0% (240/250)  IGHV3-48*03  137  ...........T.C...................C....T...............................................G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  E  S  R  D  L  W  P  
                    Query_9974   181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTTCTGTGCGAGGGAGTCAAGAGACCTATGGCCTC  270
V  96.0% (240/250)  IGHV3-48*03  227  .........................................................A.........A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01  7    --------------------------------------------------------------------------------......----  12

                                      ------------->                                  
                                      H  Y  F  D  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9974   271  ACTACTTTGACCACTGGGGCCAGGGAGCCTTGGTCACCGTCTCCTCAG  318
J  93.8% (45/48)    IGHJ4*02     1    ...........T..............A..C..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_158588

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           333     1e-93
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAA	TACGGTTTTTGGAGTGGTTA	ACCA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCAATACGGTTTTTGGAGTGGTTAACCATGACTAC	ASNTVFGVVNHDY	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	227	14	0	94.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  Y  S  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_9975   4    CCCTGAGACTCTCCTGTGCTGTCTATGGTGGGTCCTACAGTGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  94.2% (227/241)  IGHV4-34*01  50   .....TCC...A....C...................T.....G...............................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  Y  G  R  T  N  F  N  P  S  L  E  S  R  V  T  I  L  V  D  T  T  K  N  
                    Query_9975   94   GGATTGGGGAAATCAATCATTATGGAAGAACCAACTTCAACCCGTCCCTCGAGAGTCGAGTCACCATATTAGTAGACACGACCAAGAACC  183
V  94.2% (227/241)  IGHV4-34*01  140  ....................AG......C.......A.............A..................C..........T.........  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  N  T  V  F  G  V  V  N  H  
                    Query_9975   184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGCAATACGGTTTTTGGAGTGGTTAACCATG  273
V  94.2% (227/241)  IGHV4-34*01  230  .............................................................-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  95.0% (19/20)    IGHD3-3*01   5    ----------------------------------------------------------------....A...............------  24
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9975   274  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (41/41)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_322137

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           316     2e-88
IGHD3-16*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTACA	ATTATGA	CCCTAGCGCTTTTCAACTCTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTACAATTATGACCCTAGCGCTTTTCAACTCTGCTTTGACTAC	ARYNYDPSAFQLCFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	222	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  I  S  D  G  S  I  S  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9976   1    ACCCTGTCCCTCACCTGCACTATCTCTGATGGCTCCATCAGTGACTACTATTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGGCTGGAG  90
V  91.7% (222/242)  IGHV4-59*08  49   .....................G......G.............AGT.....C.....C..........................A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  F  Y  S  G  S  A  T  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_9976   91   TGGATTGGGTATGTCTTTTACAGTGGGAGCGCCACCTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  91.7% (222/242)  IGHV4-59*08  139  ............A...A.............A...A................A......................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       L  Y  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  N  Y  D  P  S  A  F  Q 
                    Query_9976   181  CTGTACTCCCTGAGGCTGACCTCAGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGGTACAATTATGACCCTAGCGCTTTTCAA  270
V  91.7% (222/242)  IGHV4-59*08  229  .A..T........A.....G...T.......................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9

                                      -------------->                                  
                                       L  C  F  D  Y  W  G  Q  G  K  V  V  T  V  S  S  
                    Query_9976   271  CTCTGCTTTGACTACTGGGGCCAGGGAAAGGTGGTCACCGTCTCTTCAG  319
J  90.9% (40/44)    IGHJ4*02     5    -----.......................CCC.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_135487

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           352     3e-99
IGHD2-21*01                                                                                           18.0    0.60 
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CAGTTTCTGTCTTAGTTTGGACCGGGGAGT	TTGTGGTGG	N/A	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGGGGAGTTTGTGGTGGTTTTGATATG	ARGSFCLSLDRGVCGGFDM	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	235	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9977   1    ACCCTGTCCCTCACCTGCGCCGTCTATGGTGGGTCTTTCAGTGGTTACTACTGGACTTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.9% (235/245)  IGHV4-34*01  49   ....................T..............C...................GC.................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  L  S  G  R  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_9977   91   TGGATTGGAGAAATCAATCTTAGTGGAAGAACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAT  180
V  95.9% (235/245)  IGHV4-34*01  139  ........G..........A.........C..........................................G................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  F  C  L  S  L  D  R 
                    Query_9977   181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGG  270
V  95.9% (235/245)  IGHV4-34*01  229  .............A...................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      ----------------------->                               
                                       G  V  C  G  G  F  D  M  W  G  Q  G  A  M  V  T  V  S  
                    Query_9977   271  GGAGTTTGTGGTGGTTTTGATATGTGGGGCCAAGGGGCAATGGTCACCGTCTCTT  325
D  100.0% (9/9)     IGHD2-21*01  7    -----.........-----------------------------------------  15
J  95.1% (39/41)    IGHJ3*02     7    --------------.........C............A..................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_96663

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           300     8e-84
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AGCCTTTCACA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGAAGCCTTTCACATTGACTAC	GREAFHIDY	237	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	20	4	0	83.3
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	19	5	0	79.2
FR3-IMGT	123	236	114	107	7	0	93.9
CDR3-IMGT (germline)	237	244	8	7	1	0	87.5
Total	N/A	N/A	232	212	20	0	91.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  N  F  R  S  S  S  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  
                    Query_9978   13   GTGCAGCCTCTGGATTCAACTTCAGGAGTTCTAGCATGACCTGGGTCCGCCAGGCTCCGGGGAAGGGACTGGAGTGGGTCTCATCCATTA  102
V  91.4% (212/232)  IGHV3-21*01  65   ..................C......T..C.A........A..................A........G......................  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  S  A  S  N  F  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  K  N  S  V  F  L  
                    Query_9978   103  ATAGTGCTAGTAATTTCATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCAAGAACTCAGTCTTTCTGC  192
V  91.4% (212/232)  IGHV3-21*01  155  G....AG.....G..A....................................................G...........C.G.A.....  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><--------CDR3-IMGT-------->                   
                                      Q  M  S  S  L  R  A  E  D  T  A  V  Y  F  C  G  R  E  A  F  H  I  D  Y  W  G  Q  G  T  L  
                    Query_9978   193  AGATGAGCAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGGGAGAGAAGCCTTTCACATTGACTACTGGGGCCAGGGAACCCTGG  282
V  91.4% (212/232)  IGHV3-21*01  245  .A....A................................A.....C......--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------...........................  33

                                                     
                                      V  T  V  S  S  
                    Query_9978   283  TCACCGTCTCCTCAG  297
J  100.0% (42/42)   IGHJ4*02     34   ...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_324913

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           338     5e-95
IGHD1-1*01                                                                                            12.2    33   
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGACGGACCCCTTTAGAGATGGCTTCAATG	GGAACG	TCGGACCG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGACGGACCCCTTTAGAGATGGCTTCAATGGGAACGTCGGACCGTACTTTGACTCC	AGTDPFRDGFNGNVGPYFDS	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  N  Y  C  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9979   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAATTACTGCTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  93.9% (231/246)  IGHV4-31*01  49   ................................................GG.....A......C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  M  S  V  D  T  S 
                    Query_9979   91   CTGGAGTGGATTGGATACATCTATTATAGTGGGAGTACGTACTACAACCCGTCCCTCAAGAGTCTAGTCACCATGTCAGTTGACACGTCT  180
V  93.9% (231/246)  IGHV4-31*01  139  ..............G...........C........C..C.............................T.....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  T  D  P  F  R  D  G 
                    Query_9979   181  AAGAACCAGTTCTCCCTGAAGGTGACCTCTGTGACGGCCGCGGACACGGCCGTGTATTATTGTGCGGGGACGGACCCCTTTAGAGATGGC  270
V  93.9% (231/246)  IGHV4-31*01  229  .....................C...G.........T.......................C......------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      DR3-IMGT------------------------>                                  
                                       F  N  G  N  V  G  P  Y  F  D  S  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_9979   271  TTCAATGGGAACGTCGGACCGTACTTTGACTCCTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTCAG  337
D  100.0% (6/6)     IGHD1-1*01   10   -------......------------------------------------------------------  15
J  93.5% (43/46)    IGHJ4*02     3    ---------------------..........A..............C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_68193

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            339     2e-95
IGHD2-15*01                                                                                           14.1    9.0  
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	TTATGCCCAGAGTCATTTAC	GGTGGTGGCT	CCAGCTTGCTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATTTATGCCCAGAGTCATTTACGGTGGTGGCTCCAGCTTGCTCCTACGGTTTGGACGTC	AKDLCPESFTVVAPACSYGLDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	251	9	9	0	0	100
Total	N/A	N/A	251	234	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  A  G  F  S  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9980   1    GGTCCCTGAGACTCTCCTGTGCAGCCGCTGGATTCAGTTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  93.2% (234/251)  IGHV3-9*01   47   ..........................T.........CC....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  N  S  H  S  I  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_9980   91   AGTGGGTCTCAGGTATTAATTGGAATAGTCATAGTATCGCCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAGCGCCA  180
V  93.2% (234/251)  IGHV3-9*01   137  ..................G..........GG...C..A.G............................................A.....  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  Y  L  Y  L  Q  M  N  S  L  T  P  D  D  T  A  L  Y  F  C  A  K  D  L  C  P  E  S  F  
                    Query_9980   181  AGAACTACCTATATCTGCAAATGAACAGTCTGACACCTGACGACACGGCCTTGTATTTCTGCGCAAAAGATTTATGCCCAGAGTCATTTA  270
V  93.2% (234/251)  IGHV3-9*01   227  ......C...G......................G.G....G................A...T.........-------------------  297
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                      -CDR3-IMGT--------------------------->                              
                                      T  V  V  A  P  A  C  S  Y  G  L  D  V  W  G  Q  G  T  R  V  T  V  S 
                    Query_9980   271  CGGTGGTGGCTCCAGCTTGCTCCTACGGTTTGGACGTCTGGGGCCAAGGGACCAGGGTCACCGTCTCC  338
D  90.0% (9/10)     IGHD2-15*01  14   -......A...---------------------------------------------------------  23
J  95.7% (44/46)    IGHJ6*02     14   ----------------------.......A........................C.............  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_68190

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         350     8e-99
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGCACTAT	TATGCTAGCAGTGGTTATT	T	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGCACTATTATGCTAGCAGTGGTTATTTCTACTTTGACTAC	ARGHYYASSGYFYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_9981     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  95.2% (236/248)  IGHV4-30-4*01  49   ..................A..............................A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  R  I  Y  Y  N  G  R  T  Y  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9981     91   CTGGAGTGGATTGGGCGCATCTATTACAATGGGAGGACCTATTACAGCCCGTCCCTCAAGAGTCGAGTTACCATATCAGTGGACACGTCC  180
V  95.2% (236/248)  IGHV4-30-4*01  139  ...............TA...........G......C.....C....A.................................A.........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                         K  N  Q  F  S  L  M  L  S  S  V  T  A  A  G  T  A  V  Y  F  C  A  R  G  H  Y  Y  A  S  S 
                    Query_9981     181  AAGAACCAGTTCTCCCTGATGCTGAGCTCTGTGACTGCCGCAGGCACGGCCGTGTATTTCTGTGCCAGGGGGCACTATTATGCTAGCAGT  270
V  95.2% (236/248)  IGHV4-30-4*01  229  ...................A.......................A..............A.........----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  89.5% (17/19)    IGHD3-22*01    8    ------------------------------------------------------------------------------....A...T...  19

                                        GT------------------>                                  
                                         G  Y  F  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9981     271  GGTTATTTCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  89.5% (17/19)    IGHD3-22*01    20   .......------------------------------------------------  26
J  100.0% (47/47)   IGHJ4*02       2    --------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_68191

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           364     6e-103
IGHD2-15*01                                                                                           14.1    9.8   
IGHJ6*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGGGCTGCATC	TTGTAGCGGT	TCCAATTGCCACGACTTAGG	CGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGCTGCATCTTGTAGCGGTTCCAATTGCCACGACTTAGGCGGAATGGACGTC	ARRAASCSGSNCHDLGGMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	261	28	0	90.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  L  G  S  G  Y  S  F  V  K  Y
                    Query_9982   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCTGGGTTCTGGATACAGCTTTGTCAAATA  90
V  90.3% (261/289)  IGHV5-51*03  6    ..............................A..............................AA...................AC..GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  T  P  G  K  G  L  E  W  M  G  T  I  Y  P  S  D  S  D  T  R  Y  S  P
                    Query_9982   91   TTGGATTGCTTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGGACCATCTATCCGTCTGACTCTGATACCCGATACAGCCC  180
V  90.3% (261/289)  IGHV5-51*03  96   C.....C.GC.............T.............................T.........TGG.............A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  L  S  T  A  F  L  Q  W  S  S  L  G  V  S  D  S  A
                    Query_9982   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTCTCTCCACCGCCTTCCTGCAGTGGAGCAGCCTGGGGGTCTCGGACAGCGC  270
V  90.3% (261/289)  IGHV5-51*03  186  .............................C.........CA..AG........A...................AA..C........C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        I  Y  Y  C  A  R  R  A  A  S  C  S  G  S  N  C  H  D  L  G  G  M  D  V  W  G  R  G  T  T
                    Query_9982   271  CATTTATTACTGTGCGAGACGGGCTGCATCTTGTAGCGGTTCCAATTGCCACGACTTAGGCGGAATGGACGTCTGGGGCCGAGGGACCAC  360
V  90.3% (261/289)  IGHV5-51*03  276  ...G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  90.0% (9/10)     IGHD2-15*01  7    ------------------------------......T...--------------------------------------------------  16
J  93.5% (43/46)    IGHJ6*02     17   ------------------------------------------------------------...T................A.........  46

                                                      
                                        V  I  V  S  S 
                    Query_9982   361  GGTCATCGTCTCCTCA  376
J  93.5% (43/46)    IGHJ6*02     47   .....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_68196

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         338     5e-95
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	N/A	TTCGCCACACTTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTTCGCCACACTTCTTACTACTTCTACGCTTTGGACGTC	ARVRHTSYYFYALDV	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  H  P  P  G  K  G 
                    Query_9983     1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCATCCCCCCGGGAAGGGC  90
V  93.2% (233/250)  IGHV4-30-4*01  49   ..................A..............................A........................G.....A.........  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  Y  I  G  Y  V  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  V  S  I  L  V  D  T  S 
                    Query_9983     91   CTGGAGTACATTGGGTACGTCTATTACAGTGGGACTACCTACTATAATAAGTCTCTCAAGAGTCGAGTTAGCATATTAGTAGACACGTCC  180
V  93.2% (233/250)  IGHV4-30-4*01  139  .......GG.........A...............GC........C..CCC...C................C.....C.............  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  H  T  S  Y  Y 
                    Query_9983     181  AAGAACCAGTTCTCCCTGAAGCTGAGATCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGTTCGCCACACTTCTTACTAC  270
V  93.2% (233/250)  IGHV4-30-4*01  229  ..........................C...........................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  93.0% (53/57)    IGHJ6*02       6    ------------------------------------------------------------------------------------......  11

                                        ----------------->                                 
                                         F  Y  A  L  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_9983     271  TTCTACGCTTTGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  321
J  93.0% (53/57)    IGHJ6*02       12   .A.....G.A..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_68197

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCCCGGCAGG	GTGGGATCTACT	TG	ACGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTC	ARHGPAGWDLLDAMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  N  F  N  S  N
                    Query_9984   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGTTCTGGATACAACTTTAACAGTAA  90
V  93.8% (273/291)  IGHV5-51*01  6    ....................................C.............A..........................G.....C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_9984   91   CTGGATCGGATGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACCAGATATAGGCC  180
V  93.8% (273/291)  IGHV5-51*01  96   .........C..................................................T.......................C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  T  A  D  K  S  T  T  T  A  Y  L  R  W  S  S  L  K  A  S  D  T  A
                    Query_9984   181  GTCCTTCCAAGGCCACGTCACCATTACAGCCGACAAGTCCACCACCACCGCCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.8% (273/291)  IGHV5-51*01  186  ...............G........CT...............T..G..............A..............................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        T  Y  Y  C  A  R  H  G  P  A  G  W  D  L  L  D  A  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_9984   271  CACTTATTACTGTGCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  93.8% (273/291)  IGHV5-51*01  276  ..TG.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD1-26*01  7    ---------------------------------......G.....---------------------------------------------  18
J  97.9% (46/47)    IGHJ6*02     16   -----------------------------------------------...G.......................................  58

                                          
                                        S 
                    Query_9984   361  CTCA  364
J  97.9% (46/47)    IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_68194

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           377     1e-106
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	ARPSSASGWHFDN	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	265	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_9985   1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCAGTTA  90
V  91.7% (265/289)  IGHV5-51*03  6    .........................G.............G.........................G.........C.GC..T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  D  I  R  Y  S  P
                    Query_9985   91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGATATTAGATATAGTCC  180
V  91.7% (265/289)  IGHV5-51*03  96   C.......G..................................................AT...GG...........CC.....C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  G
                    Query_9985   181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGG  270
V  91.7% (265/289)  IGHV5-51*03  186  .............................C..A.AA........G............................................C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9985   271  CATGTATTACTGTGCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  91.7% (265/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_43019

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  N  N  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_9986   1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-23*01  47   .....................C....................G..G.T.....A....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  L  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_9986   91   AGTGGGTCTCAGCGATTCTTGGGAGCGGTAGTAGCACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  .............T...AG...T..T...G..............G......................................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_9986   181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  93.2% (233/250)  IGHV3-23*01  227  ...............................G....................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9986   271  ATTCACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_232586

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           377     9e-107
IGHD3-10*01                                                                                           50.7    9e-11 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTT	GTATTACTATGGTTCGGGGAGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTGTATTACTATGGTTCGGGGAGTTATTCGGACTAC	ARSLYYYGSGSYSDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	245	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9987   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (245/249)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9987   91   CTGGAGTGGATTGGGCACATCTACTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTAACCATATCAGTAGACACGTCT  180
V  98.4% (245/249)  IGHV4-31*03  139  ...............T.......T............................................T.....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  Y  G  S 
                    Query_9987   181  AAGAACCAGTTCTCCCTGAAGCTGAGATCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGATCCTTGTATTACTATGGTTCG  270
V  98.4% (245/249)  IGHV4-31*03  229  ..........................C..........................................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (26/26)   IGHD3-10*01  1    --------------------------------------------------------------------------................  16

                                      ----------------->                                  
                                       G  S  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9987   271  GGGAGTTATTCGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (26/26)   IGHD3-10*01  17   ..........------------------------------------------  26
J  100.0% (40/40)   IGHJ4*02     9    ------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_220624

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           276     3e-76
IGHD2-8*01                                                                                            12.2    33   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	C	GTATGC	GACGGAGTGAAATCGGCTTAGGTGGGG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGTATGCGACGGAGTGAAATCGGCTTAGGTGGGGACTTCTTTGACCAC	ARMRRSEIGLGGDFFDH	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	21	9	0	70
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	14	7	0	66.7
FR3-IMGT	130	243	114	95	19	0	83.3
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	211	35	0	85.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  V  N  Y  L  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9988   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAATAGTGTCAATTACCTCTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  85.8% (211/246)  IGHV4-31*03  49   .............................T..........GC....GTGG....TA..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  A  Y  Y  S  G  S  D  R  Y  N  P  S  L  K  N  R  V  S  M  S  L  D  T  S 
                    Query_9988   91   CTGGAGTGGATTGGGTACGCCTACTACAGTGGGAGTGATCGGTACAACCCATCCCTCAAGAATCGAGTTTCCATGTCACTAGATACGTCG  180
V  85.8% (211/246)  IGHV4-31*03  139  ..................AT...T...........CACCTAC........G..........G.......A....A...G....C.....T  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       R  N  Q  F  S  L  K  V  A  S  M  T  A  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  I  G 
                    Query_9988   181  AGGAATCAGTTCTCCCTGAAGGTGGCCTCTATGACGGCCGCGGACACGGCCATCTATTACTGTGCGCGTATGCGACGGAGTGAAATCGGC  270
V  85.8% (211/246)  IGHV4-31*03  229  .A...C...............C..AG....G....T...............G.G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (6/6)     IGHD2-8*01   20   -------------------------------------------------------------------......-----------------  25

                                      MGT-------------------->                                  
                                       L  G  G  D  F  F  D  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_9988   271  TTAGGTGGGGACTTCTTTGACCACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  328
J  93.8% (45/48)    IGHJ4*02     1    ----------...A.......T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_336595

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           363     2e-102
IGHD2-8*02                                                                                            10.3    136   
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGGGCATTCGAGCCT	CTGGT	CC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGGGCATTCGAGCCTCTGGTCCCAACTGGTTCGACCCC	AKGGIRASGPNWFDP	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	261	29	0	90


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  T  S  G  G  I  L  N  N  Y
                    Query_9989   1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACCTCTGGAGGCATTTTGAACAACTA  90
V  90.0% (261/290)  IGHV1-69*01  6    ..................G.............................................G.T..........CC..C.G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  N  W  L  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  M  P  I  F  G  P  A  N  Y  A  Q
                    Query_9989   91   TGGGATCAATTGGCTCCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCATCATGCCTATCTTTGGTCCAGCAAACTACGCACA  180
V  90.0% (261/290)  IGHV1-69*01  96   ..CT....GC...G.G......................................G.....C............A................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  N  T  A  Y  M  E  L  S  S  L  R  S  E  D  P  A
                    Query_9989   181  GAAGTTCCAGGGCAGAGTCACCATTACCGCGGACGAGTCCACAAACACAGCCTACATGGAATTGAGCAGCCTGAGATCTGAGGACCCAGC  270
V  90.0% (261/290)  IGHV1-69*01  186  .....................G..............A.....G.G...............GC.......................A.G..  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  F  C  A  K  G  G  I  R  A  S  G  P  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9989   271  CATGTACTTCTGTGCGAAAGGGGGCATTCGAGCCTCTGGTCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  90.0% (261/290)  IGHV1-69*01  276  .G....T.A........G..----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD2-8*02   12   -----------------------------------.....--------------------------------------------------  16
J  100.0% (50/50)   IGHJ5*02     2    ------------------------------------------................................................  49

                                        
                                        
                    Query_9989   361  AG  362
J  100.0% (50/50)   IGHJ5*02     50   ..  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_336594

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           329     3e-92
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCCTTTCA	TGGGGG	CCTCATGGC	TTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCCTTTCATGGGGGCCTCATGGCTTGAATAC	ARSPFMGASWLEY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9990   1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGTTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.3% (229/248)  IGHV3-33*01  47   ..............................................C.A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  G  I  I  Y  Y  D  *  N  N  K  Y  Y  A  Y  S  V  K  G  P  F  T  I  S  R  D  N  S  
                    Query_9990   91   AGTGGGTCGGAATTATATATTATGATTGAAATAACAAATATTATGCATACTCCGTGAAGGGCCCATTCACCATCTCCAGAGACAATTCCA  180
V  92.3% (229/248)  IGHV3-33*01  137  .......G.C.G......GG......G...G...T.....C......G...............G..........................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  S  T  L  Y  L  Q  L  I  S  Q  K  A  E  D  T  A  V  Y  Y  C  A  R  S  P  F  M  G  A  S  
                    Query_9990   181  AGAGCACGCTGTATCTGCAACTGATCAGCCAGAAAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAAGCCCTTTCATGGGGGCCTCAT  270
V  92.3% (229/248)  IGHV3-33*01  227  ...A................A...A.....T..G..................G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  17   ------------------------------------------------------------------------------......------  22

                                      ---------->                                  
                                      W  L  E  Y  G  G  P  G  T  L  V  T  V  S  S  
                    Query_9990   271  GGCTTGAATACGGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  315
J  92.9% (39/42)    IGHJ4*02     7    ---....C...T......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_336597

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_9991   1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_9991   91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  R  K  A  S  D  P  A
                    Query_9991   181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCGGAAGGCCTCGGACCCCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .......C.....................................C...........G......A......T.............A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_9991   271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_9991   361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_336596

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           335     4e-94
IGHD3-10*01                                                                                           14.1    8.1  
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AATGCCC	TTCGGGG	G	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGAAATGCCCTTCGGGGGTGCTTTTGATATC	VKEMPFGGAFDI	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  L  I  F  N  S  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9992   1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGACTCATCTTCAATAGCTATTCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  92.8% (232/250)  IGHV3-64*05  47   ................................T...C.....G.......G.......................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  V  I  S  S  N  G  D  R  T  Y  Y  A  D  S  V  K  G  R  F  T  M  S  R  D  N  S  
                    Query_9992   91   AATTTGTATCAGTTATTAGTAGTAATGGGGATAGGACATATTACGCAGACTCAGTGAAGGGCAGATTCACCATGTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-64*05  137  ...A...T....C.................G...C.....C................................C................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  M  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  E  M  P  F  G  G  A  
                    Query_9992   181  AGAATATGCTGTATCTTCAAATGAACAGTCTGAGACCTGAGGACACGGCTGTCTATTATTGTGTGAAAGAAATGCCCTTCGGGGGTGCTT  270
V  92.8% (232/250)  IGHV3-64*05  227  ....C.C.......G.........G..........G................G.....C...........--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (7/7)     IGHD3-10*01  13   -----------------------------------------------------------------------------.......------  19
J  97.9% (46/47)    IGHJ3*02     4    -------------------------------------------------------------------------------------.....  8

                                      ------->                                  
                                      F  D  I  W  G  R  G  T  M  V  T  V  S  S  
                    Query_9992   271  TTGATATCTGGGGCCGAGGGACAATGGTCACCGTCTCTTCAG  312
J  97.9% (46/47)    IGHJ3*02     9    ...............A..........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_336590

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHD3-9*01                                                                                            12.2    31    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGA	ATATTT	CCCACGAGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGACGAATATTTCCCACGAGGCTTTCAGTAC	VRDEYFPRGFQY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_9993   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGGCTACTGGATGCACTGGGTCCGCCAAGCACCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-74*01  47   ............................................A............................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  I  I  D  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_9993   91   TGTGGGTCTCACGTATTAATAGTGATGGGAGTATCATAGACTCCGCGGATTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-74*01  137  .................................G..C.AG..A......C........................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  E  Y  F  P  R  G  
                    Query_9993   181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGTAAGAGACGAATATTTCCCACGAGGCT  270
V  96.0% (240/250)  IGHV3-74*01  227  .......G.......................................................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-9*01   9    -------------------------------------------------------------------------......-----------  14
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  Q  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9993   271  TTCAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  95.5% (42/44)    IGHJ4*02     7    ..G.C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_336593

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-9*01                                                                                            23.8    0.010
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCGG	TTACGATTTTTTGTCTGG	G	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGCGGTTACGATTTTTTGTCTGGG	ARDRGYDFLSG	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  F  R  D  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9994   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATATTCAGAGATGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   ......................................CAG...T.G...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_9994   91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGAGAACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATTTCAATTGACACCTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ................A..................C......................................A...G.A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  D  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  G  Y  D  F  L 
                    Query_9994   181  AAGGACCAGTTCTCCCTGAACCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGCGCGAGAGATCGCGGTTACGATTTTTTG  270
V  94.4% (237/251)  IGHV4-31*03  229  ...A................G.........................................T........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (16/18)    IGHD3-9*01   4    -----------------------------------------------------------------------------.......A.....  16

                                      ----->                                
                                       S  G  W  G  Q  G  T  L  V  T  V  S  S
                    Query_9994   271  TCTGGGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  308
D  88.9% (16/18)    IGHD3-9*01   17   A....---------------------------------  21
J  100.0% (32/32)   IGHJ4*02     15   ------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_336592

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           350     8e-99
IGHD3-3*01                                                                                            14.1    8.2  
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_9995   1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCGGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  95.2% (236/248)  IGHV4-31*03  49   ..................................C....A.C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_9995   91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  95.2% (236/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  T  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  G  A  R  G  V  G  N  N  W  F 
                    Query_9995   181  AAGACCCAGTTCTCCCTGAGGCTCAGCTCTGTGACTGCCGCGGACACGGCCGTGTACTACGGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  95.2% (236/248)  IGHV4-31*03  229  ....A..............A...G................................T...T.......----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  98.0% (49/50)    IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                 
                                       D  P  W  G  Q  G  T  L  V  P  V  S  S 
                    Query_9995   271  GACCCCTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCA  309
J  98.0% (49/50)    IGHJ5*02     12   ...........................A...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_336599

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         392     2e-111
IGHD4-4*01                                                                                            12.2    35    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTC	ACAGTA	TTGGCCACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCACAGTATTGGCCACGACTACTTTGACTAC	ARLHSIGHDYFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  R  I  S  C  E  G  S  G  Y  T  F  A  T  Y
                    Query_9996     1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGCAGTCTCTGAGGATCTCCTGTGAGGGTTCTGGATACACCTTCGCCACCTA  90
V  93.4% (270/289)  IGHV5-10-1*01  6    ........................................G....................A...............G...TA...G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  K  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_9996     91   TTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAAGATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  93.4% (270/289)  IGHV5-10-1*01  96   C..................................................G.G....................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  A  I  S  T  D  N  S  I  T  T  A  Y  L  Q  W  N  S  L  R  A  S  D  T  A
                    Query_9996     181  GTCCTTCCAAGGCCACGTCGCCATCTCAACTGACAATTCCATCACCACTGCCTACCTGCAGTGGAACAGTCTGAGGGCCTCGGACACAGC  270
V  93.4% (270/289)  IGHV5-10-1*01  186  ...................A........G.......G.......G....................G...C....A............C..  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          M  Y  Y  C  A  R  L  H  S  I  G  H  D  Y  F  D  Y  W  G  Q  G  A  L  V  P  V  S  S  
                    Query_9996     271  CATGTATTATTGCGCGAGACTTCACAGTATTGGCCACGACTACTTTGACTACTGGGGCCAGGGAGCCCTGGTTCCCGTCTCCTCAG  356
V  93.4% (270/289)  IGHV5-10-1*01  276  .........C..T......-------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD4-4*01     6    -----------------------......---------------------------------------------------------  11
J  93.8% (45/48)    IGHJ4*02       1    --------------------------------------..........................A.......CA............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_336598

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         313     2e-87
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCG	TGTAGTTGTTCCAGCT	AATATCAAAATTTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATCGTGTAGTTGTTCCAGCTAATATCAAAATTTCCTACGGAATGGACGTC	ARDRVVVPANIKISYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	225	25	0	90


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  E  A  S  G  F  I  F  S  T  Y  H  M  H  W  V  R  Q  T  P  G  K  G  L  
                    Query_9997     1    GGTCCCTGAGACTCTCCTGTGAAGCGTCTGGATTCATCTTCAGTACCTATCATATGCACTGGGTCCGCCAGACTCCAGGCAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-30-3*01  47   .....................C...C..........C........G....GC...................G..................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  L  I  S  Y  D  G  S  N  T  Y  F  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_9997     91   AGTGGGTGGCACTTATCTCCTATGATGGAAGCAACACATACTTCACAGACTCCGTAAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  90.0% (225/250)  IGHV3-30-3*01  137  ...........G....A..A..............T.A.....A.G..........G..................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                        K  N  T  L  Y  L  H  M  D  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  D  R  V  V  V  P  A  
                    Query_9997     181  AGAATACACTTTATCTACATATGGACAGCCTGAGACCTGAAGACACGGCTGTCTATTACTGTGCCAGAGATCGTGTAGTTGTTCCAGCTA  270
V  90.0% (225/250)  IGHV3-30-3*01  227  ....C..G..G.....G..A...A...........G....G...........G...........G.....--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD2-2*01     8    -------------------------------------------------------------------------......A..A......-  23

                                        -IMGT----------------------->                                 
                                        N  I  K  I  S  Y  G  M  D  V  W  G  P  G  T  T  V  A  V  S  S 
                    Query_9997     271  ATATCAAAATTTCCTACGGAATGGACGTCTGGGGCCCAGGGACCACGGTCGCCGTCTCCTCA  332
J  93.9% (46/49)    IGHJ6*02       14   -------------......T................A.............A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_218219

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           385     4e-109
IGHD6-13*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGGC	AGCAGCAGCTGG	ATAGGGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGCAGCAGCAGCTGGATAGGGGTTGACTCC	ARDQGSSSWIGVDS	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	74	24	22	2	0	91.7
FR2-IMGT	75	125	51	50	1	0	98
CDR2-IMGT	126	146	21	21	0	0	100
FR3-IMGT	147	260	114	110	4	0	96.5
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	257	11	0	95.9


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         V  L  V  K  P  S  E  T  L  S  L  T  C  S  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  
                    Query_9998   1    CAGTACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGTAGTGTCTCTGGTGGCTCCATAAGTAATTACTACTGGAGCTGGATCCGGC  90
V  95.9% (257/268)  IGHV4-59*01  26   ...G............T.......................C.C..................C....G.......................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_9998   91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGATATATCTATTACAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  95.9% (257/268)  IGHV4-59*01  116  ...............................G..........................C...............................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  R  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  
                    Query_9998   181  TATCAGTAGACACGTCCAGGAACCAGTTCTCCCTGAAGCTGAGTTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGATC  270
V  95.9% (257/268)  IGHV4-59*01  206  ..................A........................C................................C...........--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -------CDR3-IMGT--------------->                                  
                                      Q  G  S  S  S  W  I  G  V  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_9998   271  AGGGCAGCAGCAGCTGGATAGGGGTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  100.0% (12/12)   IGHD6-13*01  7    -----............-------------------------------------------------  18
J  97.6% (41/42)    IGHJ4*02     7    ------------------------......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_218218

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACAGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACAGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_9999   1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.6% (225/243)  IGHV4-34*01  49   ................................G...T..................G...........................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  P  L  S  L  D  M  S  K  K 
                    Query_9999   91   TGGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGCGTCCCCTTATCATTAGACATGTCCAAGAAG  180
V  92.6% (225/243)  IGHV4-34*01  139  .............................C..................C..A.......A...A..A.....G......C.........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  V  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y 
                    Query_9999   181  CAGTTCTCCGTGAAGGTGACGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAACAGTAAAGGGGGTTATTACTGTCTAC  270
V  92.6% (225/243)  IGHV4-34*01  229  .........C.....C...GC..........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  20   --------------------------------------------------------------------------..........------  29

                                      -------------------->                                 
                                       Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_9999   271  CAGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  100.0% (40/40)   IGHJ6*02     23   --------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_58654

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            322     2e-90
IGHD3-3*01                                                                                            12.2    32   
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ACCCGTGTGATGCC	TACCATCTTTGG	TG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACCCGTGTGATGCCTACCATCTTTGGTGACTACGGTATGGACGTC	ARTRVMPTIFGDYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	24	3	0	88.9
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	18	3	0	85.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  D  S  I  T  S  S  H  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_10000  1    GGTCCCTGAGACTCTCCTGTGCTGTCTCTGGTGACTCCATCACCAGTAGTCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  91.5% (227/248)  IGHV4-4*01   47   ..A.....TCC...A....C.............G........G.......A.......................................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  K  W  I  G  E  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  R  T  R  V  T  I  S  I  D  K  S  
                    Query_10000  91   TGAAGTGGATTGGGGAAATCTATTATAGTGGGACCACGAACTACAATCCGTCCCTCAGGACTCGAGTCACCATATCAATAGACAAGTCCA  180
V  91.5% (227/248)  IGHV4-4*01   137  ..G....................C.........G...C........C..........A..G................G............  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  T  R  V  M  P  T  I  
                    Query_10000  181  AGAATCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTTCTGTGCCAGAACCCGTGTGATGCCTACCATCT  270
V  91.5% (227/248)  IGHV4-4*01   227  ....C...............................................G....G......G...----------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                       
D  83.3% (10/12)    IGHD3-3*01   5    ----------------------------------------------------------------------------------...G..T.  12

                                      GT-------------------->                                 
                                      F  G  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10000  271  TTGGTGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
D  83.3% (10/12)    IGHD3-3*01   13   ....----------------------------------------------------  16
J  100.0% (50/50)   IGHJ6*02     13   ------..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_218210

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            411     5e-117
IGHD6-19*01                                                                                           27.6    8e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GAAGAG	ATAGCAGTGGCTGG	CTCGTCA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGAAGAGATAGCAGTGGCTGGCTCGTCAACTTTAACTAC	ARGRDSSGWLVNFNY	273	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	29	1	0	96.7
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	158	27	26	1	0	96.3
FR3-IMGT	159	272	114	109	5	0	95.6
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	271	8	0	97.1


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  T  S  A  A  W  N  W  
                    Query_10001  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCACCAGTGCTGCTTGGAACTGGA  90
V  97.1% (271/279)  IGHV6-1*01   26   .....................................................................A....................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  C  L  E  W  L  G  R  T  Y  Y  R  S  K  W  H  N  D  Y  A  I  S  V  K  
                    Query_10001  91   TCAGGCAGTCCCCATCGAGATGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGCATAATGATTATGCAATATCTGTCAAAA  180
V  97.1% (271/279)  IGHV6-1*01   116  ....................G.........................................T..............G.......G....  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  N  I  N  P  D  T  P  K  N  Q  F  S  L  H  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_10001  181  GTCGAATAAACATCAACCCAGACACACCCAAGAACCAGTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  97.1% (271/279)  IGHV6-1*01   206  .........C................T......................G........................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-----------------CDR3-IMGT----------------->                                
                                      C  A  R  G  R  D  S  S  G  W  L  V  N  F  N  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_10001  271  GTGCAAGAGGAAGAGATAGCAGTGGCTGGCTCGTCAACTTTAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  349
V  97.1% (271/279)  IGHV6-1*01   296  .........----------------------------------------------------------------------  304
                                      C  A  R                                                                        
D  100.0% (14/14)   IGHD6-19*01  5    ---------------..............--------------------------------------------------  18
J  97.7% (42/43)    IGHJ4*02     4    ------------------------------------.....G.....................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_218213

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           389     2e-110
IGHD3-22*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAC	AGTAGTAGTTATT	CTTCCGTAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGTAGTAGTTATTCTTCCGTAAACTTTGACTAC	ARHSSSYSSVNFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	63	7	0	90
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  T  E  V  K  K  P  G  S  S  V  K  V  S  C  R  A  T  G  D  T  L  S  N  H
                    Query_10002  1    GCAGCTGGTGCAGTCTGGAACTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAAGTCTCCTGTAGGGCTACCGGAGACACCCTCAGCAACCA  90
V  93.1% (269/289)  IGHV1-69*01  6    ..................GG...............................G........C.A....T.T....G....T......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  V  L  H  I  T  N  Y  A  Q
                    Query_10002  91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGAATCATCCCTGTCCTTCATATAACAAACTATGCACA  180
V  93.1% (269/289)  IGHV1-69*01  96   ......................................................G.........A..T..GG..C.G.......C.....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_10002  181  GAAGTTCCAGGGCAGAGTCACAATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  93.1% (269/289)  IGHV1-69*01  186  .....................G....................................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  H  S  S  S  Y  S  S  V  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10002  271  CGTGTATTACTGTGCGAGACACAGTAGTAGTTATTCTTCCGTAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.1% (269/289)  IGHV1-69*01  276  ...................----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                       
D  92.3% (12/13)    IGHD3-22*01  14   ----------------------......G......------------------------------------------------------  26
J  100.0% (45/45)   IGHJ4*02     4    --------------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_218212

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           346     2e-97
IGHD2-21*02                                                                                           18.0    0.61 
IGHJ1*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTCACAGTATTGTGGCGC	TGGCGACTGCTA	CGCCTCC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCACAGTATTGTGGCGCTGGCGACTGCTACGCCTCCGCTGAGTACTTCCAGCAC	ARHSQYCGAGDCYASAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10003  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*08  49   .............................................T..........C.................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_10003  91   TGGATTGGGTATATCCATTCCAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGTTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*08  139  ...............T...A...............C...................................AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       H  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  S  Q  Y  C  G  A  G  D 
                    Query_10003  181  CACTTCTCCCTGACCCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATTCACAGTATTGTGGCGCTGGCGAC  270
V  95.1% (233/245)  IGHV4-59*08  229  ..G..........AG....G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD2-21*02  13   -----------------------------------------------------------------------------------...T...  19

                                      MGT-------------------------->                                  
                                       C  Y  A  S  A  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10003  271  TGCTACGCCTCCGCTGAGTACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  334
D  91.7% (11/12)    IGHD2-21*02  20   .....-----------------------------------------------------------  24
J  96.2% (50/52)    IGHJ1*01     1    ------------.....A.........................................C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_218215

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD1-7*01                                                                                            12.2    32   
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGCGAGGA	TGGAAGTAC	GACGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGCGAGGATGGAAGTACGACGGCTACTTCTACGGTATGGACGTC	ARDPRGWKYDGYFYGMDV	232	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	117	21	14	1	6	66.7
FR3-IMGT	118	231	114	108	6	0	94.7
CDR3-IMGT (germline)	232	239	8	8	0	0	100
Total	N/A	N/A	245	231	8	6	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10004  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCAATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   ...................................C......................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S        W  S  T  N  Y  N  P  S  P  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_10004  91   TGGATTGGGTATATCTCTT------GGAGCACCAACTACAACCCCTCCCCCAAGAGTCGAGTCAGCATTTCAGTAGACACGTCCAAGAAT  174
V  94.3% (231/245)  IGHV4-59*01  139  ................A..ACAGTG........................T..............C...A....................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  R  G  W  K  Y  D  G 
                    Query_10004  175  CAGTTCTCCCTGAAGCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCCGCGAGGATGGAAGTACGACGGC  264
V  94.3% (231/245)  IGHV4-59*01  229  .................G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (8/9)      IGHD1-7*01   9    ---------------------------------------------------------------------------.....C...------  17
J  98.2% (54/55)    IGHJ6*02     8    -----------------------------------------------------------------------------------------.  8

                                      -------------------->                                 
                                       Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10004  265  TACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  98.2% (54/55)    IGHJ6*02     9    ....A.................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_218214

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           447     8e-128
IGHD3-22*01                                                                                           14.1    9.8   
IGHJ6*02                                                                                              108     9e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCCGT	TGGTTAT	AATTCCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTC	ARAVGYNSDYYYGMDV	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	71	0	0	100
CDR1-IMGT	79	102	24	24	0	0	100
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	112	2	0	98.2
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	290	288	2	0	99.3


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  
                    Query_10005  8    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCT  97
V  99.3% (288/290)  IGHV5-51*01  5    ..........................................................................................  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  
                    Query_10005  98   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGAC  187
V  99.3% (288/290)  IGHV5-51*01  95   ........................................................................................C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  A  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_10005  188  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGGCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCG  277
V  99.3% (288/290)  IGHV5-51*01  185  ......................................T...................................................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-------------------CDR3-IMGT------------------>                            
                                      A  M  Y  Y  C  A  R  A  V  G  Y  N  S  D  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_10005  278  CCATGTATTACTGTGCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCT  367
V  99.3% (288/290)  IGHV5-51*01  275  ....................----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD3-22*01  19   -------------------------.......----------------------------------------------------------  25
J  100.0% (56/56)   IGHJ6*02     7    ---------------------------------------...................................................  57

                                           
                                      S  S 
                    Query_10005  368  CCTCA  372
J  100.0% (56/56)   IGHJ6*02     58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_218217

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            310     1e-86
IGHD1-7*01                                                                                            14.1    8.2  
IGHJ6*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAACTTTCGCGACATAT	GAACTAC	A	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAACTTTCGCGACATATGAACTACATATGGACGTC	AKTFATYELHMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  R  N  N  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_10006  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGAAATAATTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.6% (221/244)  IGHV4-4*02   49   ..................G.................A.......T.G...C.......G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  N  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  M  S  M  A  K  L  K 
                    Query_10006  91   GAGTGGATTGGCGAAATCTATCATAATGGCAACACCAACTACAACCCGTCCCTCCAGAGTCGGGTCACCATGTCAATGGCCAAGTTGAAG  180
V  90.6% (221/244)  IGHV4-4*02   139  ...........G.............G...G.G......................A.......A........A...G.A.A.....CC...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  F  F  L  K  L  S  D  V  T  A  A  D  T  A  V  Y  Y  C  A  K  T  F  A  T  Y  E  L  H 
                    Query_10006  181  AATCAGTTCTTCCTGAAGCTGAGCGATGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAAAACTTTCGCGACATATGAACTACAT  270
V  90.6% (221/244)  IGHV4-4*02   229  ..C.......C.............TC........................G.............--------------------------  292
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD1-7*01   11   ---------------------------------------------------------------------------------.......--  17
J  95.3% (41/43)    IGHJ6*02     20   -----------------------------------------------------------------------------------------.  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  P  V  S  V  S  S 
                    Query_10006  271  ATGGACGTCTGGGGCCAAGGGACCCCGGTCAGCGTCTCCTCA  312
J  95.3% (41/43)    IGHJ6*02     21   ........................A......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_328539

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           308     4e-86
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTGG	AGCAGTGGCTGGT	CGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTGGAGCAGTGGCTGGTCGGTTTGACTTC	AREGGAVAGRFDF	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	224	27	0	89.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  R  G  S  V  S  S  G  G  Y  H  W  S  W  I  R  Q  T  P  G  R  G 
                    Query_10007  1    ACCCTGTCCCTCACCTGCTCTGTCTCTCGTGGCTCCGTCAGCAGTGGGGGTTATCACTGGTCCTGGATCCGGCAGACCCCAGGCAGGGGA  90
V  89.2% (224/251)  IGHV4-61*08  49   ..................A........G...................T.....CT.....AG.............C.......G.A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  F  T  G  T  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  A  D  M  S 
                    Query_10007  91   CTGGAGTGGATTGGCTATATCCACTTCACTGGGACCACCAAGTACAACCCCTCCCTTAAGAGTCGAGTCAGCATATCAGCAGACATGTCC  180
V  89.2% (224/251)  IGHV4-61*08  139  ..............G......T.T.A..G.....G......C..............C.............C........T.....C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  A  V  A  G 
                    Query_10007  181  AAGAACCAATTCTCCCTGAACCTGAGGTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTGCGAGAGAGGGTGGAGCAGTGGCTGGT  270
V  89.2% (224/251)  IGHV4-61*08  229  ........G...........G.....C..........................G..T..C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD6-19*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------->                                  
                                       R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10007  271  CGGTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02     6    ---.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_207758

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           336     1e-94
IGHD6-13*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGT	GGTATAGCAGCA	CCCTTAAA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGTGGTATAGCAGCACCCTTAAATACTTTGACTAC	ARVWYSSTLKYFDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  I  S  G  S  H  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_10008  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCATCAGTGGTAGTCACTATTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  93.2% (232/249)  IGHV4-31*02  50   .....TCC...A...........................G.......G..T....C..................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  V  G  Y  I  Y  Y  S  G  I  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_10008  94   TGGAGTGGGTTGGATACATTTATTATAGTGGGATCACCTACTACAATCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  93.2% (232/249)  IGHV4-31*02  140  ........A....G.....C.....C.......G............C...........................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  K  L  S  S  L  T  A  A  D  T  A  V  Y  F  C  A  R  V  W  Y  S  S  T  L  
                    Query_10008  184  AGAACCAGTTCTCCCTGAAGCTGAGCTCCCTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGTGTGGTATAGCAGCACCCTTA  273
V  93.2% (232/249)  IGHV4-31*02  230  ............................TG...........................A...........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD6-13*01  2    ------------------------------------------------------------------------............------  13

                                      ------------->                                
                                      K  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_10008  274  AATACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
J  100.0% (44/44)   IGHJ4*02     3    --............................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_332975

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10009  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10009  91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*01  139  ........GT........T.......G...............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_10009  181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.5% (234/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10009  271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_207750

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	22	2	6	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	221	24	6	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  S  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_10010  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTCCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.0% (221/251)  IGHV4-34*01  49   .......................C..T..........T.------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_10010  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.0% (221/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_10010  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.0% (221/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_10010  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_207751

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           310     1e-86
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGGGTATGA	ATTACTAC	CGGCTGCCAGTAATATA	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGGGTATGAATTACTACCGGCTGCCAGTAATATAATGGACGCC	ARVGYELLPAASNIMDA	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  F  R  G  Y  L  W  S  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_10011  1    ACCCTGTCCCTCACCTGCGCTGTATCTGGTGGGTCCTTCAGAGGTTACCTCTGGAGTTGGATCCGCCAGGCCCCAGGGAAGGGGCTGGAG  90
V  90.6% (221/244)  IGHV4-34*01  49   .......................C.A...............T......TA......C............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  T  N  H  R  G  S  T  N  Y  N  P  S  L  K  S  R  V  V  I  S  V  G  T  S  K  N 
                    Query_10011  91   TGGATTGGGGAAACCAATCATAGAGGATCCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCGTCATCTCAGTTGGCACGTCCAAAAAC  180
V  90.6% (221/244)  IGHV4-34*01  139  .............T.........T...AG..................................AC...A.....A.A.........G...  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  G  Y  E  L  L  P  A  A 
                    Query_10011  181  CAGTTCTCCTTGAGGCTGACCTCAGTGACCGCCGCGGACACGGCTGTCTATTATTGTGCGAGAGTGGGGTATGAATTACTACCGGCTGCC  270
V  90.6% (221/244)  IGHV4-34*01  229  .........C...A.....G...T.......................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-22*01  24   --------------------------------------------------------------------------........--------  31

                                      ----------------->                                 
                                       S  N  I  M  D  A  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10011  271  AGTAATATAATGGACGCCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  321
J  97.6% (41/42)    IGHJ6*02     21   ---------.......T..................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_207752

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     2e-95
IGHD3-10*01                                                                                           10.3    117  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_10012  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-21*01  47   ............................................AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  E  Y  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_10012  91   AGTGGGTCTCATCCATTAGTAGTACTAGTGAATACATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  93.6% (233/249)  IGHV3-21*01  137  ........................G....AGT........C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_10012  181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTT  270
V  93.6% (233/249)  IGHV3-21*01  227  ............A......A..............................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10012  271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_332974

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           433     1e-123
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTC	ARHGDDSGGYLYYLYGMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	111	3	0	97.4
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	286	9	0	96.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_10013  2    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  91
V  96.9% (286/295)  IGHV5-51*01  2    ....G.............................A...................A...................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  T  R  Y  
                    Query_10013  92   CCTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATACCAGATACA  181
V  96.9% (286/295)  IGHV5-51*01  92   G...........G.................................................T...........................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_10013  182  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  96.9% (286/295)  IGHV5-51*01  182  ...........C...................A.C........................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  M  Y  Y  C  A  R  H  G  D  D  S  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  
                    Query_10013  272  CCGCCATGTATTACTGTGCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTCTGGGGCCAAGGGACCA  361
V  96.9% (286/295)  IGHV5-51*01  272  .........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  92.9% (13/14)    IGHD1-26*01  4    ---------------------------------........A.....-------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------------.......AC.....T.........................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_10013  362  CGGTCACCGTCTCCTCA  378
J  94.7% (54/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_207754

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         386     1e-109
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCTTAAGGTCAATCGCGTC	CAGTGGCTGG	GCGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCA	ARHPLRSIASSGWAS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_10014    1    GCAGCTGGTGCAGTCTGGAGGAGAGGTGAAGAAGCCCGGGGAGTCTTTGAGGATTTCCTGTAAGGCTTCTGGATACACCTTTACCAACTA  90
V  92.7% (268/289)  IGHV5-10-1*01  6    ....................C.........A...............C.......C..........G...........G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  S  Y  S  P
                    Query_10014    91   CTGGATCAGCTGGGTGCGTCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGACCCTAGTGACTCTTATACCAGCTACAGTCC  180
V  92.7% (268/289)  IGHV5-10-1*01  96   ..................C...A.....................................T...................A......C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  D  G  N  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  M  A  S  D  T  A
                    Query_10014    181  GTCCTTCGACGGCAACGTCACCATCTCAGTTGACAAGTCCATCAGTACTGCCTATTTGCAGTGGAGCAGCCTGATGGCCTCGGACACCGC  270
V  92.7% (268/289)  IGHV5-10-1*01  186  .......C.A...C...............C...............C........CC..................A...............  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          M  Y  Y  C  A  R  H  P  L  R  S  I  A  S  S  G  W  A  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_10014    271  CATGTATTATTGTGCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCATGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  92.7% (268/289)  IGHV5-10-1*01  276  .........C.........-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD6-19*01    9    ------------------------------------------..........--------------------------------------  18
J  100.0% (34/34)   IGHJ4*02       15   ----------------------------------------------------------................................  46

                                          
                                          
                    Query_10014    361  AG  362
J  100.0% (34/34)   IGHJ4*02       47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_207755

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            344     6e-97
IGHD6-19*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	AATGGCG	ATAGCACTGGCTGGT	GT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAAATGGCGATAGCACTGGCTGGTGTTACTTTGACTAC	ARNGDSTGWCYFDY	252	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	137	27	24	3	0	88.9
FR3-IMGT	138	251	114	108	6	0	94.7
CDR3-IMGT (germline)	252	257	6	6	0	0	100
Total	N/A	N/A	254	237	17	0	93.3


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  I  S  G  D  S  I  S  S  N  N  A  A  W  N  W  I  R  Q  S  P  S  R  G  
                    Query_10015  4    CCCTGAGACTCTCCTGTACCATCTCCGGGGACAGTATCTCTAGCAACAATGCTGCTTGGAACTGGATCAGGCAGTCCCCATCGCGAGGCC  93
V  93.3% (237/254)  IGHV6-1*01   50   ....CTC....A.....G.................G............G..................................A......  139
                                         L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R  Q  S  P  S  R  G  

                                      ----------------><--------CDR2-IMGT--------><---------------------------------------------
                                      L  E  W  L  G  R  A  Y  Y  R  S  K  W  Y  D  D  Y  S  V  S  V  K  S  R  I  T  I  N  P  D  
                    Query_10015  94   TTGAGTGGCTGGGAAGGGCATATTACAGGTCCAAGTGGTATGATGATTATTCAGTCTCTGTGAAGAGTCGAATAACCATCAACCCAGACA  183
V  93.3% (237/254)  IGHV6-1*01   140  .................A....C..................A........G....A........A.........................  229
                                      L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R  I  T  I  N  P  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A  R  N  G  D  S  T  
                    Query_10015  184  CATCCAAGAACCAGTTCTCTCTGCAACTGAACTCTGTGACTCCCGAGGACACGGCCGTGTATTACTGTGCAAGAAATGGCGATAGCACTG  273
V  93.3% (237/254)  IGHV6-1*01   230  ...................C.....G.............................T..................----------------  303
                                      T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A  R                 
D  93.3% (14/15)    IGHD6-19*01  5    ---------------------------------------------------------------------------------......G..  13

                                      IMGT--------------->                                  
                                      G  W  C  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10015  274  GCTGGTGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  93.3% (14/15)    IGHD6-19*01  14   ......------------------------------------------------  19
J  100.0% (46/46)   IGHJ4*02     3    --------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_207756

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            322     2e-90
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ6*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAGG	ATTACTATGATAGAAGT	CGTCACGACGAATT	CGGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCAGGATTACTATGATAGAAGTCGTCACGACGAATTCGGTCTGGACGTC	ARDQDYYDRSRHDEFGLDV	247	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	132	27	17	4	6	63
FR3-IMGT	133	246	114	110	4	0	96.5
CDR3-IMGT (germline)	247	254	8	8	0	0	100
Total	N/A	N/A	254	232	16	6	91.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  D  S  F  S  S  D  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10016  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCATTCAGCAGCGATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  91.3% (232/254)  IGHV4-4*02   49   ..................G............G...CA.......TAG.......................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><--------CDR2-IMGT--------><-----------------------------------------------
                                       E  W  I  G  E  V  F  D  S  D  S  G  S  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K 
                    Query_10016  91   GAGTGGATTGGGGAAGTCTTTGATAGTGATAGTGGGAGCGCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAG  180
V  91.3% (232/254)  IGHV4-4*02   139  ...............A...A.C....------.......A..................................................  222
                                       E  W  I  G  E  I  Y  H  S        G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K 

                                      -----FR3-IMGT----------------------------------------------------><-----------------------
                                       S  N  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  D  Y  Y  D 
                    Query_10016  181  TCCAACAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGAGAGACCAGGATTACTATGAT  270
V  91.3% (232/254)  IGHV4-4*02   223  .....G................A.....G...........................G.................----------------  296
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                   
D  94.1% (16/17)    IGHD3-22*01  3    -------------------------------------------------------------------------------...........  13

                                      CDR3-IMGT----------------------->                                 
                                       R  S  R  H  D  E  F  G  L  D  V  W  G  P  G  T  T  V  A  V  S  S 
                    Query_10016  271  AGAAGTCGTCACGACGAATTCGGTCTGGACGTCTGGGGCCCAGGGACCACGGTTGCCGTCTCCTCA  336
D  94.1% (16/17)    IGHD3-22*01  14   ..T...------------------------------------------------------------  19
J  91.3% (42/46)    IGHJ6*02     17   --------------------....A...............A............CA...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_1507

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           346     2e-97
IGHD3-9*01                                                                                            29.5    2e-04
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATCCAC	GTATAACGATGTTTTGACTGG	CCAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATCCACGTATAACGATGTTTTGACTGGCCATAACTGGTTCGACCCC	ARGSTYNDVLTGHNWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  L  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10017  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCATTCTCAGTAGTTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-48*03  47   ....................G...............CCT...................C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  V  R  G  T  T  I  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  H  A  
                    Query_10017  91   AGTGGGTTTCATACATTAGTGTTAGAGGTACTACCATATACTACGCAGACTCTGTGCAGGGCCGATTTACCATCTCTAGAGACCACGCCA  180
V  94.4% (235/249)  IGHV3-48*03  137  ....................AG...T....G.........................A..........C........C......A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      T  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  S  T  Y  N  D  V  
                    Query_10017  181  CGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGATCCACGTATAACGATGTTT  270
V  94.4% (235/249)  IGHV3-48*03  227  A....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD3-9*01   1    ----------------------------------------------------------------------------....T.....A...  14

                                      IMGT--------------------->                                  
                                      L  T  G  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10017  271  TGACTGGCCATAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  90.5% (19/21)    IGHD3-9*01   15   .......-----------------------------------------------------  21
J  100.0% (49/49)   IGHJ5*02     3    -----------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_1506

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           246     2e-67
IGHD2-8*02                                                                                            16.1    2.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*02	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGATGCGGCGGAGTGAATTCGGC	ACTGGTGG	GG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATGCGGCGGAGTGAATTCGGCACTGGTGGGGACTTCTTTGACCAC	ARMRRSEFGTGGDFFDH	246	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	20	10	0	66.7
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	94	20	0	82.5
CDR3-IMGT (germline)	246	248	3	3	0	0	100
Total	N/A	N/A	245	201	44	0	82


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  L  R  S  V  S  F  L  W  S  W  V  R  *  D  P  G  K  G  
                    Query_10018  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCCTGAGGAGTGTGTCTTTCCTCTGGAGCTGGGTCCGCTAGGACCCAGGGAAGGGCC  93
V  82.0% (201/245)  IGHV4-31*03  50   .....TCC...A.......................A.C..C....GTGG..A.TA..........A.....C..C...............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  R  Y  Y  S  G  S  S  R  Y  N  P  S  L  G  S  R  V  S  M  S  L  D  T  S  
                    Query_10018  94   TGGAGTGGATTGGTTACAGGTATTACAGTGGAAGTAGTCGGTATAATCCGTCCCTCGGGAGTCGAGTTTCCATGTCACTAGACACGTCTA  183
V  82.0% (201/245)  IGHV4-31*03  140  .............G....TC...........G..C.CCTAC..C..C.........AA..........A....A...G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  Q  F  S  L  K  L  T  S  V  T  T  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  F  G  
                    Query_10018  184  GGAACCAATTTTCCCTGAAGTTGACCTCAGTGACGACCGCGGACACGGCCATCTATTACTGTGCGCGGATGCGGCGGAGTGAATTCGGCA  273
V  82.0% (201/245)  IGHV4-31*03  230  A......G..C.........C...G...T.....TG..............G.G............-------------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD2-8*02   11   -----------------------------------------------------------------------------------------.  11

                                      GT-------------------->                                  
                                      T  G  G  D  F  F  D  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10018  274  CTGGTGGGGACTTCTTTGACCACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  330
D  100.0% (8/8)     IGHD2-8*02   12   .......--------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*02     1    ---------...A.......T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_1505

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCGACC	GGGTACATCAGTGGC	GGCA	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCGACCGGGTACATCAGTGGCGGCATCGACCTC	AKATGYISGGIDL	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	24	16	5	3	66.7
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	247	222	22	3	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  D  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10019  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCAGTTTTGACACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  89.9% (222/247)  IGHV3-23*01  47   .....................C..............CC...AG..G.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  S  S  G     G  D  N  T  Y  Y  A  D  S  V  K  G  R  F  A  L  S  R  D  N  S  
                    Query_10019  91   AATGGGTCTCAGGTTCTAGTGGT---GGTGATAATACATACTACGCAGACTCCGTGAAGGGCCGGTTCGCCCTCTCCAGAGACAATTCCA  177
V  89.9% (222/247)  IGHV3-23*01  137  .G..........C.AT.......AGT....G..GC.................................A..A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  S  T  L  Y  L  H  M  N  G  L  R  V  E  D  T  A  I  Y  Y  C  A  K  A  T  G  Y  I  S  G  
                    Query_10019  178  AGAGCACACTGTATCTGCACATGAACGGCCTGAGAGTCGAGGACACGGCCATATATTACTGTGCGAAGGCGACCGGGTACATCAGTGGCG  267
V  89.9% (222/247)  IGHV3-23*01  227  ...A...G...........A......A.........C.............G................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  86.7% (13/15)    IGHD6-19*01  1    --------------------------------------------------------------------------.....T.G.......-  15

                                      ---------->                                  
                                      G  I  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10019  268  GCATCGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.6% (41/42)    IGHJ5*02     10   ---......C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_1504

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         360     1e-101
IGHD2-2*02                                                                                            37.2    1e-06 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	TCACCTCGGC	TGTAGTAGTACCAGCTTCTATA	GC	CTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTCACCTCGGCTGTAGTAGTACCAGCTTCTATAGCCTTTAACTCC	ARVTSAVVVPASIAFNS	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  A  I  S  S  G  G  Y  C  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10020    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCGCCATCAGCAGTGGTGGTTACTGCTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-4*01  49   ..................A..............T...............A.....A..................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  H  I  Y  Y  N  G  R  T  Y  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_10020    91   CTGGAGTGGATTGGGCACATCTATTACAATGGGAGGACCTACTACAACCCGTCCCTCAAGAGTCGAGTTTCCATATCAGTAGACACGTCC  180
V  96.0% (240/250)  IGHV4-30-4*01  139  ...............T............G......C.................................A....................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  T  S  A  V  V  V 
                    Query_10020    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCTGACACGGCCGTCTATTACTGTGCCAGAGTCACCTCGGCTGTAGTAGTA  270
V  96.0% (240/250)  IGHV4-30-4*01  229  .........................................A...........G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.5% (21/22)    IGHD2-2*02     8    --------------------------------------------------------------------------------..........  17

                                        MGT-------------------->                                  
                                         P  A  S  I  A  F  N  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10020    271  CCAGCTTCTATAGCCTTTAACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.5% (21/22)    IGHD2-2*02     18   ......G.....----------------------------------------------  29
J  95.5% (42/44)    IGHJ4*02       5    --------------....G...A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_1503

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           346     2e-97
IGHD6-13*01                                                                                           12.2    30   
IGHJ3*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	A	TGGTAC	N/A	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGTACATGCTTTTGATATC	ARMVHAFDI	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10021  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (232/243)  IGHV4-59*08  49   ..........................................AG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       C  I  G  Y  I  Y  Y  M  G  S  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_10021  91   TGCATTGGATATATCTATTACATGGGGAGCACCAACTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCATTAGACACATCCAAGAAC  180
V  95.5% (232/243)  IGHV4-59*08  139  ..G.....G.............GT...........................A....................G.......G.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  M  V  H  A  F  D  I  W  G 
                    Query_10021  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTTTATTACTGTGCGAGAATGGTACATGCTTTTGATATCTGGGGC  270
V  95.5% (232/243)  IGHV4-59*08  229  ...................G...........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-13*01  16   ----------------------------------------------------------------......--------------------  21
J  97.9% (47/48)    IGHJ3*02     3    ----------------------------------------------------------------------....................  22

                                                                  
                                       Q  G  T  M  V  T  V  S  S  
                    Query_10021  271  CAGGGGACAATGGTCACCGTCTCTTCAG  298
J  97.9% (47/48)    IGHJ3*02     23   ..A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_1502

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           363     2e-102
IGHD3-22*01                                                                                           21.8    0.043 
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCAATTTCCCGT	TAGTGGTTATT	CCG	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCAATTTCCCGTTAGTGGTTATTCCGATTACTACTACAAGTACGCTATGGACGTC	AKDQFPVSGYSDYYYKYAMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10022  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATACACTGGGTCCGCCAGGCGCCAGGCAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-30*18  47   .......................................................G.................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  S  Y  D  G  S  N  K  D  Y  G  D  P  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_10022  91   AGTGGGTGGCAGGTATATCATATGATGGAAGTAATAAAGACTATGGAGACCCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  96.4% (241/250)  IGHV3-30*18  137  ............T.........................T......C....T..................................TT...  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  Q  F  P  V  S  G  
                    Query_10022  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTTTATTACTGTGCGAAAGATCAATTTCCCGTTAGTGGTT  270
V  96.4% (241/250)  IGHV3-30*18  227  ....................................................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD3-22*01  16   ----------------------------------------------------------------------------------........  23

                                      DR3-IMGT-------------------------->                                 
                                      Y  S  D  Y  Y  Y  K  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10022  271  ATTCCGATTACTACTACAAGTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  338
D  100.0% (11/11)   IGHD3-22*01  24   ...-----------------------------------------------------------------  26
J  95.2% (59/62)    IGHJ6*02     1    ------...........T.C....G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_1501

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  N  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  Q  L  E 
                    Query_10023  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAATACCTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAACAACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ..................A.....................G..GT...................................GGG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_10023  91   TGGATTGGTTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_10023  181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  93.5% (229/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_10023  271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_1500

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10024  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_10024  91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_10024  181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_10024  271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_1509

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           305     3e-85
IGHD1-26*01                                                                                           10.3    114  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	CCCCA	TGGGA	CT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACCCCATGGGACTCTTTGACTAC	ANPMGLFDY	240	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	24	17	4	3	70.8
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	247	223	21	3	90.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  A  M  S  W  V  R  Q  T  P  G  R  G  L  
                    Query_10025  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGCTTCACCTTTAGCGACTATGCCATGAGCTGGGTCCGCCAGACTCCGGGGAGGGGGCTGG  90
V  90.3% (223/247)  IGHV3-23*01  47   ...............................A............AG.........................G....A....A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  S  G  A     T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10025  91   AGTGGGTCTCATCTATCAGTGACAGTGGTGCTA---CATTCTACGCGGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCGA  177
V  90.3% (223/247)  IGHV3-23*01  137  ...........G....T....GT.......G..GCA...A......A.........................................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  T  L  Y  L  Q  M  N  N  L  R  L  E  D  T  A  I  Y  Y  C  A  N  P  M  G  L  F  D  Y  
                    Query_10025  178  AGAATACACTGTATCTGCAAATGAACAACCTGAGACTCGAGGACACGGCCATCTATTACTGTGCGAACCCCATGGGACTCTTTGACTACT  267
V  90.3% (223/247)  IGHV3-23*01  227  ....C..G...................G.......GC.............G.A..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD1-26*01  8    ------------------------------------------------------------------------.....-------------  12
J  97.7% (43/44)    IGHJ4*02     5    -------------------------------------------------------------------------------...........  15

                                                                       
                                      W  G  Q  G  T  L  V  A  V  S  S  
                    Query_10025  268  GGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  300
J  97.7% (43/44)    IGHJ4*02     16   ....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_1508

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTTGTGG	TACTCTGGTTCGGGGAGT	AAAACCCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTTGTGGTACTCTGGTTCGGGGAGTAAAACCCATTTTGACTAC	ARGLWYSGSGSKTHFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_10026  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .............................T...............................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10026  91   CTGGAGTGGATTGGGTACATTTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ....................C.....................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  W  Y  S  G  S 
                    Query_10026  181  AAGAACCAGTTCTCCCTGAAGCTGCGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGTTTGTGGTACTCTGGTTCG  270
V  98.4% (246/250)  IGHV4-31*03  229  ........................A.............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  5    ------------------------------------------------------------------------------....A.......  16

                                      MGT-------------------->                                  
                                       G  S  K  T  H  F  D  Y  W  G  Q  G  T  L  V  T  V  A  S  
                    Query_10026  271  GGGAGTAAAACCCATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCGCCTCAG  328
D  94.4% (17/18)    IGHD3-10*01  17   ......----------------------------------------------------  22
J  97.7% (42/43)    IGHJ4*02     6    ---------------....................................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_119330

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         397     8e-113
IGHD2-21*02                                                                                           19.9    0.18  
IGHJ4*02                                                                                              56.4    4e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ATCGAGTCGAC	TGTGGCGGTGACT	ACTCTCCCCGACGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAATCGAGTCGACTGTGGCGGTGACTACTCTCCCCGACGGC	ARIESTVAVTTLPDG	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	69	2	0	97.2
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	106	8	0	93
CDR3-IMGT (germline)	290	295	6	5	1	0	83.3
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                        <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                           Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  L  G  S  G  Y  N  F  T  N  
                    Query_10027    6    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTTTGGGTTCTGGATACAACTTTACCAACT  95
V  93.8% (272/290)  IGHV5-10-1*01  5    ..............................................................AA..............G........G..  94
                                           Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  

                                        ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                        Y  W  I  N  W  V  R  Q  I  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  F  Y  T  N  Y  S  
                    Query_10027    96   ACTGGATCAATTGGGTGCGCCAGATTCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTTTTACACCAACTACAGTC  185
V  93.8% (272/290)  IGHV5-10-1*01  95   .........GC..............G..............................................C...T...........C.  184
                                        Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  

                                        -------------------------------------------FR3-IMGT---------------------------------------
                                        P  S  F  Q  G  H  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  S  G  L  R  A  S  A  T  
                    Query_10027    186  CGTCCTTCCAAGGCCACGTCACCATTTCAGCTGACACGTCCATCAGCACTGCCTACCTCCAGTGGAGCGGCCTGAGGGCCTCGGCCACCG  275
V  93.8% (272/290)  IGHV5-10-1*01  185  .........................C..........A.....................G.........A......A........A.....  274
                                        P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                        -------------><-----------------CDR3-IMGT----------------->                               
                                        A  I  Y  Y  C  A  R  I  E  S  T  V  A  V  T  T  L  P  D  G  W  G  Q  G  T  M  V  I  V  S  
                    Query_10027    276  CCATATATTACTGTGCGCGAATCGAGTCGACTGTGGCGGTGACTACTCTCCCCGACGGCTGGGGCCAGGGAACCATGGTCATCGTCTCCT  365
V  93.8% (272/290)  IGHV5-10-1*01  275  ....G............A..----------------------------------------------------------------------  294
                                        A  M  Y  Y  C  A  R                                                                       
D  92.3% (12/13)    IGHD2-21*02    8    -------------------------------.....T.......----------------------------------------------  20
J  94.3% (33/35)    IGHJ4*02       14   ----------------------------------------------------------................C......C........  45

                                           
                                        S  
                    Query_10027    366  CAG  368
J  94.3% (33/35)    IGHJ4*02       46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_60465

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           394     7e-112
IGHD3-22*01                                                                                           18.0    0.65  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCGTCG	TGATAGTTATGGTTA	CC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGCGTCGTGATAGTTATGGTTACCACTTTGACCGC	ARGRRDSYGYHFDR	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  G  T  F  R  S  Y
                    Query_10028  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAGGGTCTCCTGCAAGGCCTCTGGAGGCACCTTCAGAAGCTA  90
V  93.4% (271/290)  IGHV1-69*01  6    ..................G.......................C.......A...............T.................C.....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  T  G  G  I  I  P  L  F  G  T  P  N  C  A  Q
                    Query_10028  91   TGTCATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGACGGGAGGGATCATCCCTCTGTTTGGCACACCAAACTGCGCACA  180
V  93.4% (271/290)  IGHV1-69*01  96   ..CT....G......................................T................A.C.....T...G......A......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  M  S  T  T  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_10028  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCTATGAGCACAACTTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  93.4% (271/290)  IGHV1-69*01  186  .......................................C.C.......G.C......................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  G  R  R  D  S  Y  G  Y  H  F  D  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10028  271  CGTGTATTACTGTGCGCGAGGGCGTCGTGATAGTTATGGTTACCACTTTGACCGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.4% (271/290)  IGHV1-69*01  276  ................A...---------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                       
D  86.7% (13/15)    IGHD3-22*01  10   ---------------------------.......AG......-----------------------------------------------  24
J  95.6% (43/45)    IGHJ4*02     4    --------------------------------------------........TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_32324

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10029  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  98.4% (239/243)  IGHV4-59*01  49   ......................................................................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10029  91   TGGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  .........T................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_10029  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (18/20)    IGHD5-18*01  1    ----------------------------------------------------------------..........C.....T...------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10029  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_119333

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           420     7e-120
IGHD2-21*02                                                                                           14.1    9.3   
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGGGGGGATG	GGTGGTAACT	CCGGCGTCT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGGGGGGATGGGTGGTAACTCCGGCGTCTTAC	ARVGGWVVTPASY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	278	9	0	96.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  H  Y 
                    Query_10030  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCCACTAT  91
V  96.9% (278/287)  IGHV1-18*01  7    .................................................A..................................AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  R  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_10030  92   GGTATCAGCTGGGTGCGACGGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAG  181
V  96.9% (278/287)  IGHV1-18*01  97   ...................A......................................................................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  K  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10030  182  AACCTCCAGGGCAAAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGATGACACGGCC  271
V  96.9% (278/287)  IGHV1-18*01  187  ..G..........G..................................................................C.........  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------CDR3-IMGT-------------->                                  
                                       I  Y  Y  C  A  R  V  G  G  W  V  V  T  P  A  S  Y  W  G  Q  G  T  L  V  S  F  S  S  
                    Query_10030  272  ATCTATTACTGTGCGAGGGTGGGGGGATGGGTGGTAACTCCGGCGTCTTACTGGGGCCAGGGAACCCTGGTCTCCTTCTCCTCAG  356
V  96.9% (278/287)  IGHV1-18*01  277  G.G..............--------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                       
D  90.0% (9/10)     IGHD2-21*02  11   -----------------------------......G...----------------------------------------------  20
J  94.6% (35/37)    IGHJ4*02     12   ------------------------------------------------........................A..G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_119334

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           308     4e-86
IGHD2-15*01                                                                                           29.5    2e-04
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCGGGACG	TGTAGTGGTGGAAACTGCTAC	GTCCATACTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCGGGACGTGTAGTGGTGGAAACTGCTACGTCCATACTCTTGATATC	ARDPGTCSGGNCYVHTLDI	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	222	25	0	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  S  V  T  S  N  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10031  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGGTTCAGCGTCACCAGCAACTCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.9% (222/247)  IGHV3-53*01  47   ....................G...............C.....GT.......A.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  A  V  I  Y  G  G  G  T  T  R  Y  T  D  S  V  K  G  R  F  T  V  S  R  D  N  F  N  
                    Query_10031  91   AGTGGGTAGCTGTTATTTATGGCGGCGGCACAACACGCTACACAGACTCCGTGAAGGGCCGATTCACCGTTTCCAGAGACAATTTCAACA  180
V  89.9% (222/247)  IGHV3-53*01  137  .......CT.A.........A....T..T.GC...TA....G..........................A.C.............C...G.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------CDR3-IM
                                      N  T  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  P  G  T  C  S  G  G  
                    Query_10031  181  ACACGCTGCATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTCTATTATTGTGCGAGAGATCCCGGGACGTGTAGTGGTGGAA  270
V  89.9% (222/247)  IGHV3-53*01  227  ........T......................................G.G.....C...........-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  90.5% (19/21)    IGHD2-15*01  8    -----------------------------------------------------------------------------...........T.  20

                                      GT----------------------->                                  
                                      N  C  Y  V  H  T  L  D  I  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_10031  271  ACTGCTACGTCCATACTCTTGATATCTGGGGCCAAGGGACAAGGGTCACCGTCTCTTCAG  330
D  90.5% (19/21)    IGHD2-15*01  21   G.......----------------------------------------------------  28
J  97.6% (41/42)    IGHJ3*02     9    ------------------........................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_119335

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         353     9e-100
IGHD6-13*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              60.3    2e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGTGGGGTCCGTTATCCCG	GCAGCTGG	GACGGCTGCC	GGGGC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	236	10	0	95.9


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  L 
                    Query_10032    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCATCAGCAGTGGTTACTACTGGGGCTGGCTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.9% (236/246)  IGHV4-38-2*01  49   ...............................................................A....G.....................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  T  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 
                    Query_10032    91   GAGTGGATTGGGACTATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACTATGTCAGTAGACACGTCCAAG  180
V  95.9% (236/246)  IGHV4-38-2*01  139  .............G.................G....................................C..A..................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT---------------------------------------------------->                              
                                         N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  G  G  V  R  Y  P  G  S 
                    Query_10032    181  AACCACTTCTCCCTGAAGCTGAGCTCTGTGACGGCCGCTGACACGGCCGTGTTTTACTGTGCGAGAGGTGGGGTCCGTTATCCCGGCAGC  270
V  95.9% (236/246)  IGHV4-38-2*01  229  .....G..........................C.....A.............A.............------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD6-13*01    11   -------------------------------------------------------------------------------------.....  15

                                                                                    
                                         W  D  G  C  R  G  Q  G  T  L  V  T  V  S  S
                    Query_10032    271  TGGGACGGCTGCCGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
D  100.0% (8/8)     IGHD6-13*01    16   ...-----------------------------------------  18
J  100.0% (31/31)   IGHJ4*02       16   -------------...............................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_119337

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           300     8e-84
IGHD1-1*01                                                                                            14.1    8.3  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTACCCTA	AACTGGGACG	GACCTTCTGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTACCCTAAACTGGGACGGACCTTCTGCTTTTGACCAC	ARLTLNWDGPSAFDH	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	217	25	0	89.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  S  G  D  P  M  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E  
                    Query_10033  4    CCCTGAGACTCTCCTGTGCTGTCTCCGGTGACCCCATGACTAGTTATTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGAGACTGGAGT  93
V  89.7% (217/242)  IGHV4-59*01  50   .....TCC...A....CA.......T....G.T....C.G......C........C........................G.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  L  S  I  D  T  S  K  N  
                    Query_10033  94   GGATTGGATATATCTACTACAGTGGGAGCACCAACTACAACCCTTCCCTCAGGAGTCGAGTCACCTTATCGATAGACACGTCCAAGAACC  183
V  89.7% (217/242)  IGHV4-59*01  140  .......G........T..........................C.......A.............A....AG..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      H  F  S  L  S  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  T  L  N  W  D  G  P  S  
                    Query_10033  184  ACTTCTCCCTGAGCCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGACTTACCCTAAACTGGGACGGACCTTCTG  273
V  89.7% (217/242)  IGHV4-59*01  230  .G..........AG................................G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  90.0% (9/10)     IGHD1-1*01   6    -----------------------------------------------------------------------......A...---------  15

                                      ---------->                                  
                                      A  F  D  H  W  G  R  G  T  L  V  A  V  S  S  
                    Query_10033  274  CTTTTGACCACTGGGGCCGGGGAACCCTGGTCGCCGTCTCCTCAG  318
J  93.0% (40/43)    IGHJ4*02     6    --......T.........A.............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_119339

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            344     6e-97
IGHD3-16*01                                                                                           12.2    30   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAA	ATTACCTTT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATTACCTTTTTTGACTTT	ARQITFFDF	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10034  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACAACCTATTGGATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (234/248)  IGHV3-7*01   47   ..........................................GT.G...........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  K  E  D  G  S  E  K  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10034  91   AGTGGGTGGCCAGCATAAAGGAAGATGGAAGTGAGAAGCACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (234/248)  IGHV3-7*01   137  ............A.......C................AT...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  V  F  L  Q  M  K  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  T  F  F  D  F  
                    Query_10034  181  AGAACTCTGTGTTTCTGCAAATGAAGAGCCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGACAAATTACCTTTTTTGACTTTT  270
V  94.4% (234/248)  IGHV3-7*01   227  .......AC...A............C................................C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD3-16*01  9    -----------------------------------------------------------------------.....G...----------  17
J  93.0% (40/43)    IGHJ4*02     6    --------------------------------------------------------------------------------.......AC.  15

                                                                       
                                      W  G  Q  G  T  L  V  A  V  S  S  
                    Query_10034  271  GGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  303
J  93.0% (40/43)    IGHJ4*02     16   ....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_32328

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           333     1e-93
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACAAGGGGATAA	CTATAGTTAC	GAATCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACAAGGGGATAACTATAGTTACGAATCT	AQGDNYSYES	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	241	2	2	0	0	100
Total	N/A	N/A	241	227	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  W  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10035  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTTGGAACTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.2% (227/241)  IGHV3-53*01  47   ............................................A.C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  A  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  K  
                    Query_10035  91   AGTGGGTCTCAGTCATTTATGCCGGTGGTAGCACATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  94.2% (227/241)  IGHV3-53*01  137  .............T......AG...............C..C........................................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------CDR3-IMGT---------> 
                                      K  V  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  Q  G  D  N  Y  S  Y  E  S  
                    Query_10035  181  AAGTGTTGTATCTTCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCACAAGGGGATAACTATAGTTACGAATCTT  270
V  94.2% (227/241)  IGHV3-53*01  227  .CAC.C.............G.........................................-----------------------------  287
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  90.0% (9/10)     IGHD5-18*01  11   -------------------------------------------------------------------------....G.....-------  20
J  97.1% (33/34)    IGHJ4*02     15   -----------------------------------------------------------------------------------------.  15

                                                                       
                                      W  G  R  G  T  L  V  T  V  S  S  
                    Query_10035  271  GGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  303
J  97.1% (33/34)    IGHJ4*02     16   ......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_32329

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           310     1e-86
IGHD5-12*01                                                                                           12.2    29   
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCC	GTGGAT	TAAGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCGTGGATTAAGCTTC	ATRGLSF	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  D  M  N  W  L  R  Q  A  P  G  K  G  P  
                    Query_10036  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACTTTCAGTAATTACGACATGAACTGGCTCCGCCAGGCTCCTGGGAAGGGGCCGG  90
V  90.2% (222/246)  IGHV3-48*03  47   .....................C...............C.......G...T..A.........G.............A..........T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  D  I  T  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_10036  91   AGTGGGTCTCATCCATTAGTAGTCGTGGAGATATCACATACTACGCGGACTCAGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.2% (222/246)  IGHV3-48*03  137  .......T....A..........A....TAG..C..T.........A.....T...A.................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  S  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  T  R  G  L  S  F  W  G  
                    Query_10036  181  AGAACTCACTGTCCCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTCTTTATTACTGTGCGACCCGTGGATTAAGCTTCTGGGGCC  270
V  90.2% (222/246)  IGHV3-48*03  227  ............AT......................C...G.........G...............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD5-12*01  1    ---------------------------------------------------------------------......---------------  6
J  94.3% (33/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  A  Q  V  T  V  S  S  
                    Query_10036  271  AGGGAGCCCAGGTCACCGTCTCCTCAG  297
J  94.3% (33/35)    IGHJ4*02     22   .....A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_35675

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            311     4e-87
IGHD3-10*01                                                                                           12.2    31   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TTAAGGGAAGTA	GTTCGTCGACTTATT	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTAAGGGAAGTAGTTCGTCGACTTATTACTGGTTCGACCCC	VKGSSSSTYYWFDP	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	21	8	0	72.4
CDR1-IMGT	30	56	27	24	3	0	88.9
FR2-IMGT	57	107	51	47	4	0	92.2
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  L  V  S  G  G  S  I  T  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_10037  1    GGTCCCTGAGACTCTCCTGTCTTGTCTCTGGTGGGTCCATTACCAGTAGTAACTGGTGGTCTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  90.9% (221/243)  IGHV4-4*02   47   ..A.....TCC...A....CGC............C.....C.G................AG.............................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  A  D  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  
                    Query_10037  91   TGGAGTGGATTGCGGATATCTATTATAGTGGGAGCACCAATTACAACCCGTCCCTGAAGAGTCGAGTCACCATCTCATTAGACAAGTCCA  180
V  90.9% (221/243)  IGHV4-4*02   137  ............G...A......C................C..............C.................A...G............  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  K  G  S  S  S  S  T  Y  
                    Query_10037  181  AGAACCAGTTCTCCCTGAAACTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGTTAAGGGAAGTAGTTCGTCGACTTATT  270
V  90.9% (221/243)  IGHV4-4*02   227  ...................G......................................C....---------------------------  289
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                             
D  80.0% (12/15)    IGHD3-10*01  12   ---------------------------------------------------------------------------.....GG..G.....  26

                                      ------------->                                  
                                      Y  W  F  D  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10037  271  ACTGGTTCGACCCCTGGGGCCGGGGAACCCTGGTCACTGTCTCCTCAG  318
J  95.8% (46/48)    IGHJ5*02     4    .....................A...............C..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_22182

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGCCCCC	ARDPTGSGYNFGSNWFAP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_10038  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_10038  91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCGGTAGACACGTCCAAGAGC  180
V  92.2% (226/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A..A................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  P  K  L  S  S  L  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_10038  181  CAGTTCTCCCCGAAGCTGAGCTCTCTGACCGCTGCGGACGCGGCCGTGTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.2% (226/245)  IGHV4-59*01  229  ..........T.............G..............A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  A  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10038  271  GGTTCTAACTGGTTCGCCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------..........A......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_22181

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            392     2e-111
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	KRSAECS*Y	277	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	54	56	51	3	2	91.1
CDR1-IMGT	55	84	30	27	3	0	90
FR2-IMGT	85	135	51	51	0	0	100
CDR2-IMGT	136	162	27	25	2	0	92.6
FR3-IMGT	163	276	114	109	5	0	95.6
CDR3-IMGT (germline)	277	283	7	7	0	0	100
Total	N/A	N/A	285	270	13	2	94.7


Alignments

                                      <-----------------------FR1-IMGT-----------------------><----------CDR1-IMGT---------><---
                                         G  A    A  G  A  V  L  A  D  P  L  T  H  L  C  H  L  R  R  Q  C  L  *  R  Q  C  Y  L  E
                    Query_10039  1    CAGGTGCAG--CTGGTGCAGTCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGCGACAGTGTCTCTAGCGACAGTGCTACTTGGA  88
V  94.7% (270/285)  IGHV6-1*01   20   .....C...GA......A..C.....................................G...............A........G......  109
                                         G  P  G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  

                                      -----------------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------
                                        L  D  Q  A  V  P  I  E  R  P  *  V  A  G  K  D  I  L  Q  V  *  V  V  *  *  F  C  N  V  C
                    Query_10039  89   ACTGGATCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCTGAGTGGTATAATGATTCTGCAATGTCTG  178
V  94.7% (270/285)  IGHV6-1*01   110  .............................................................CA...............A....G.A....  199
                                      N  W  I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  

                                      -------------------------------------FR3-IMGT---------------------------------------------
                                        E  R  S  S  N  H  Q  P  R  H  I  Q  E  P  V  L  P  A  A  E  L  C  D  S  R  G  H  G  C  V
                    Query_10039  179  TGAAAGGTCGAGTAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGT  268
V  94.7% (270/285)  IGHV6-1*01   200  .....A.....A..............................................................................  289
                                      V  K  S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  

                                      -------><----------CDR3-IMGT--------->                                  
                                        L  L  C  K  R  S  A  E  C  S  *  Y  L  G  P  R  D  N  G  H  R  L  F   
                    Query_10039  269  ATTACTGTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  340
V  94.7% (270/285)  IGHV6-1*01   290  ...............---------------------------------------------------------  304
                                      Y  Y  C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02     4    -------------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_35676

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           332     3e-93
IGHD3-10*01                                                                                           14.1    8.1  
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AATGCCC	TTCGGGG	G	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGAAATGCCCTTCGGGGGTGCTTTTGATATC	VKEMPFGGAFDI	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  L  I  F  N  S  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10040  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGACTCATCTTCAATAGCTATTCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  92.4% (231/250)  IGHV3-64*05  47   ................................T...C.....G.......G.......................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  V  I  S  S  N  G  D  R  T  Y  Y  A  D  S  V  K  G  R  F  T  M  S  R  D  N  S  
                    Query_10040  91   AATTTGTATCAGTTATTAGTAGTAATGGGGATAGGACATATTACGCAGACTCAGTGAAGGGCAGGTTCACCATGTCCAGAGACAATTCCA  180
V  92.4% (231/250)  IGHV3-64*05  137  ...A...T....C.................G...C.....C.......................A........C................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  M  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  E  M  P  F  G  G  A  
                    Query_10040  181  AGAATATGCTGTATCTTCAAATGAACAGTCTGAGACCTGAGGACACGGCTGTCTATTATTGTGTGAAAGAAATGCCCTTCGGGGGTGCTT  270
V  92.4% (231/250)  IGHV3-64*05  227  ....C.C.......G.........G..........G................G.....C...........--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (7/7)     IGHD3-10*01  13   -----------------------------------------------------------------------------.......------  19
J  97.9% (46/47)    IGHJ3*02     4    -------------------------------------------------------------------------------------.....  8

                                      ------->                                  
                                      F  D  I  W  G  R  G  T  M  V  T  V  S  S  
                    Query_10040  271  TTGATATCTGGGGCCGAGGGACAATGGTCACCGTCTCTTCAG  312
J  97.9% (46/47)    IGHJ3*02     9    ...............A..........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_22187

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            335     4e-94
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAAGGGAGA	TGACTACGGT	CAGGGTCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAAAAGGGAGATGACTACGGTCAGGGTCCTTTTGACTTC	AREKGDDYGQGPFDF	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	27	21	21	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	126	24	18	6	0	75
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	248	8	7	1	0	87.5
Total	N/A	N/A	242	228	14	0	94.2


Alignments

                                      <-----FR1-IMGT------><-------CDR1-IMGT------><--------------------FR2-IMGT----------------
                                       R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V 
                    Query_10041  7    AGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTC  96
V  94.2% (228/242)  IGHV3-9*01   55   ..........................................................................................  144
                                       R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V 

                                      -----><-------CDR2-IMGT------><----------------------------------------------------FR3-IMG
                                       S  S  I  S  W  N  S  N  G  V  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S 
                    Query_10041  97   TCAAGTATTAGTTGGAATAGTAATGGTGTTGACTATGCGGACTCTGTGAAGGGCCGATTTACCATCTCCAGAGACAATGCCAAGAACTCC  186
V  94.2% (228/242)  IGHV3-9*01   145  ...G.................GG.A.CA.A.G...........................C.................C............  234
                                       S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S 

                                      T----------------------------------------------------><-----------------CDR3-IMGT---------
                                       L  F  L  Q  M  N  S  L  R  A  E  D  T  A  F  Y  Y  C  A  R  E  K  G  D  D  Y  G  Q  G  P 
                    Query_10041  187  CTGTTTTTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTCTATTACTGTGCAAGAGAAAAGGGAGATGACTACGGTCAGGGTCCT  276
V  94.2% (228/242)  IGHV3-9*01   235  ....A.C.....................................G.............A...----------------------------  296
                                       L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                               
D  100.0% (10/10)   IGHD4-17*01  1    -----------------------------------------------------------------------..........---------  10

                                      -------->                                  
                                       F  D  F  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_10041  277  TTTGACTTCTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  319
J  95.3% (41/43)    IGHJ4*02     6    .......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_22186

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           10.3    132   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_10042  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  95.2% (276/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  Y  A  Q 
                    Query_10042  92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTATGCACAG  181
V  95.2% (276/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10042  182  GGGCTCCAAGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*01  187  AA......G.................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10042  272  ATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  95.2% (276/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_35673

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            307     1e-85
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ3*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGCAC	CAGCAGCTGG	CACCCCAAACCTCG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCGCACCAGCAGCTGGCACCCCAAACCTCGTGATGCTTTTGATGTC	ARDRTSSWHPKPRDAFDV	230	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	43	27	25	2	0	92.6
FR2-IMGT	44	94	51	50	1	0	98
CDR2-IMGT	95	115	21	18	3	0	85.7
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	210	14	0	93.8


Alignments

                                      <F><--------CDR1-IMGT--------><--------------------FR2-IMGT---------------------><-----CDR
                                       S  G  G  S  I  S  S  T  N  W  W  T  W  V  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  F  P 
                    Query_10043  14   TCTGGAGGCTCCATCAGCAGTACTAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTTTCCT  103
V  93.8% (210/224)  IGHV4-4*01   73   .....T................G...........G..................................................A..A.  162
                                       S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H 

                                      2-IMGT-----><----------------------------------------------------FR3-IMGT-----------------
                                       R  G  S  T  S  Y  N  P  S  L  K  G  R  V  T  I  S  L  D  K  S  K  N  Q  F  S  L  R  L  T 
                    Query_10043  104  AGAGGGAGCACCAGCTACAACCCGTCCCTCAAGGGTCGAGTCACCATATCACTAGACAAGTCCAAGAACCAGTTCTCCCTGAGGTTGACC  193
V  93.8% (210/224)  IGHV4-4*01   163  ..T..........A...................A.................G..............................A.C...G.  252
                                       S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S 

                                      -----------------------------------><----------------------CDR3-IMGT--------------------->
                                       S  V  T  A  A  D  T  A  V  Y  F  C  A  R  D  R  T  S  S  W  H  P  K  P  R  D  A  F  D  V 
                    Query_10043  194  TCTGTGACCGCCGCGGACACGGCCGTATATTTCTGTGCGAGAGACCGCACCAGCAGCTGGCACCCCAAACCTCGTGATGCTTTTGATGTC  283
V  93.8% (210/224)  IGHV4-4*01   253  ..........................G....G............----------------------------------------------  296
                                       S  V  T  A  A  D  T  A  V  Y  C  C  A  R                                                 
D  100.0% (10/10)   IGHD6-13*01  9    --------------------------------------------------..........------------------------------  18
J  98.0% (49/50)    IGHJ3*01     1    --------------------------------------------------------------------------................  16

                                                                        
                                       W  G  Q  G  T  M  V  S  V  S  S  
                    Query_10043  284  TGGGGCCAAGGGACAATGGTCTCCGTCTCTTCAG  317
J  98.0% (49/50)    IGHJ3*01     17   .....................A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_22184

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           339     2e-95
IGHD5-12*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGAGTGCCCGGACA	TGGATATAGCGGCTACG	GGTT	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGAGTGCCCGGACATGGATATAGCGGCTACGGGTTCTATTTAGACTAT	ARRVPGHGYSGYGFYLDY	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  S  G  D  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_10044  1    ACCCTGTCCCTCACCTGCACTGTCTCCGGTGCCTCCATCAGCAGTGGTGACTACTACTGGATCTGGATCCGCCAGCACCCCGGGAAGGGC  90
V  93.6% (233/249)  IGHV4-31*03  49   ..........................T....G.................GT..........G..................A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  D  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_10044  91   CTGGACTGGATTGGGTCCATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGCGTTACAATGTCGGTAGACACGTCT  180
V  93.6% (233/249)  IGHV4-31*03  139  .....G..........A................................................A.....C..A..A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  N  Q  F  S  L  T  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  V  P  G  H  G  Y 
                    Query_10044  181  AAGAACCAGTTCTCCCTGACCCTGAACTCTGTGACGGCCGCGGACACGGCCGTGTATTACTGTGCGAGAAGAGTGCCCGGACATGGATAT  270
V  93.6% (233/249)  IGHV4-31*03  229  ...................AG....G.........T.................................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.1% (16/17)    IGHD5-12*01  2    -----------------------------------------------------------------------------------.......  8

                                      -IMGT--------------------->                                  
                                       S  G  Y  G  F  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10044  271  AGCGGCTACGGGTTCTATTTAGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  94.1% (16/17)    IGHD5-12*01  9    ..T.......---------------------------------------------------  18
J  93.6% (44/47)    IGHJ4*02     2    --------------...C..T.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_22189

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         396     2e-112
IGHD3-22*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCCC	AGTAGTGG	CCCCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCCCAGTAGTGGCCCCGACTACTTTGACTAC	ARLPSSGPDYFDY	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	75	72	68	4	0	94.4
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	106	8	0	93
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  R  I  S  C  E  G  S  G  Y  T  F  A  T 
                    Query_10045    4    GTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGCAGTCTCTGAGGATCTCCTGTGAGGGTTCTGGATACACCTTCGCCACC  93
V  93.5% (272/291)  IGHV5-10-1*01  4    ..G.....G.................................G....................A...............G...TA...G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  K  I  D  P  S  D  S  Y  T  N  Y  S 
                    Query_10045    94   TATTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAAGATTGATCCTAGTGACTCTTATACCAACTACAGC  183
V  93.5% (272/291)  IGHV5-10-1*01  94   ..C..................................................G.G..................................  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  Q  G  H  V  T  I  S  T  D  N  S  I  T  T  A  Y  L  Q  W  N  S  L  K  A  S  D  T 
                    Query_10045    184  CCGTCCTTCCAAGGCCACGTCACCATCTCAACTGACAATTCCATCACCACTGCCTACCTGCAGTGGAACAGTCTGAAGGCCTCGGACACA  273
V  93.5% (272/291)  IGHV5-10-1*01  184  ..............................G.......G.......G....................G...C.................C  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><--------------CDR3-IMGT-------------->                                  
                                         A  M  Y  Y  C  A  R  L  P  S  S  G  P  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10045    274  GCCATGTATTATTGCGCGAGACTTCCCAGTAGTGGCCCCGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  361
V  93.5% (272/291)  IGHV5-10-1*01  274  ...........C..T......-------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD3-22*01    14   ---------------------------........-----------------------------------------------------  21
J  100.0% (48/48)   IGHJ4*02       1    ----------------------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_22188

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           402     3e-114
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	TCCTCC	GGGTATATCAGTGGCTGG	GACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGATCCTCCGGGTATATCAGTGGCTGGGACGACTACAACGCTATGGACGTC	AGSSGYISGWDDYNAMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  F
                    Query_10046  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGTAGTTT  90
V  94.5% (273/289)  IGHV1-69*01  6    ....................................................................................C..C.A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  A  L  F  G  I  P  N  Y  A  Q
                    Query_10046  91   TGCTATCAGCTGGGTGCGACAGGCCCCAGGACAAGGGCTTGAGTGGATGGGAGGGATCATCGCTCTCTTTGGAATACCAAACTACGCACA  180
V  94.5% (273/289)  IGHV1-69*01  96   ...........................T.................................C..A.......T.C.G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        G  F  Q  G  R  V  M  I  T  A  D  E  S  T  S  T  A  C  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_10046  181  GGGGTTCCAGGGCAGAGTCATGATTACCGCGGACGAATCCACGAGCACAGCCTGCATGGAGCTGAGCAGCCTAAGATCTGAGGACACGGC  270
V  94.5% (273/289)  IGHV1-69*01  186  .AA.................C................................A..................G.................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  G  S  S  G  Y  I  S  G  W  D  D  Y  N  A  M  D  V  W  G  Q  G  T  T  V  T
                    Query_10046  271  CGTCTATTACTGTGCGGGATCCTCCGGGTATATCAGTGGCTGGGACGACTACAACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCAC  360
V  94.5% (273/289)  IGHV1-69*01  276  ...G............A..-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  94.4% (17/18)    IGHD6-19*01  1    -------------------------.......G..........-----------------------------------------------  18
J  96.2% (51/53)    IGHJ6*02     10   -----------------------------------------------.....T...G.................................  52

                                                
                                        V  S  S 
                    Query_10046  361  CGTCTCCTCA  370
J  96.2% (51/53)    IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_35679

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         367     6e-104
IGHD4-17*01                                                                                           21.8    0.040 
IGHJ5*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGACTACGGTG	GTGACTC	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATGACTACGGTGGTGACTCCAATTGGTTCGACCCC	VRDDYGGDSNWFDP	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	243	8	0	96.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  R  G 
                    Query_10047    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  96.8% (243/251)  IGHV4-30-2*01  49   .....................................................................................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  S  Y  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_10047    91   CTGGAGTGGATTGGGTACATCTATCATAGTGGGAGCTCCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCAATAGACACGTCC  180
V  96.8% (243/251)  IGHV4-30-2*01  139  ....................................A.....................................A...G......G....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  D  D  Y  G  G  D  S 
                    Query_10047    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGTCAGAGATGACTACGGTGGTGACTCC  270
V  96.8% (243/251)  IGHV4-30-2*01  229  .....................................................G.....C....C......-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD4-17*01    1    -----------------------------------------------------------------------...........--------  11
J  97.9% (47/48)    IGHJ5*02       2    -----------------------------------------------------------------------------------------.  2

                                        -------------->                                
                                         N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_10047    271  AATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  317
J  97.9% (47/48)    IGHJ5*02       3    ..C............................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_35678

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           372     3e-105
IGHD2-21*02                                                                                           18.0    0.66  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACTG	GGTGGGGACTACTAT	GGTCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTC	VRRLGGDYYGPFEF	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	69	5	0	93.2
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	105	9	0	92.1
CDR3-IMGT (germline)	292	298	7	6	1	0	85.7
Total	N/A	N/A	294	266	28	0	90.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  E  I  S  C  K  A  Y  G  Y  A  F  N  
                    Query_10048  5    AGATGCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCCGGGGAGTCTCTGGAGATCTCCTGTAAGGCTTATGGATACGCCTTTAACG  94
V  90.5% (266/294)  IGHV5-51*01  2    ..G.........................G........................A...............G..C.......AG.....C.A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  G  W  V  R  Q  K  P  E  K  G  L  D  W  M  G  V  I  Y  P  D  D  L  D  T  T  Y  
                    Query_10048  95   ACTACTGGATCGGCTGGGTGCGCCAGAAGCCCGAGAAAGGCCTGGATTGGATGGGGGTCATCTATCCTGATGACCTTGATACGACATACA  184
V  90.5% (266/294)  IGHV5-51*01  92   G..........................T.....G............G.........A............G....TC......C.G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  N  T  I  Y  L  R  W  S  S  L  K  A  S  D  
                    Query_10048  185  GTCCGTCCTTCCAAGGCCAGGTCACAATCTCAGTCGACAAGTCCATCAACACCATCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  90.5% (266/294)  IGHV5-51*01  182  .C.......................C.......C..............G....GC........A..........................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  V  R  R  L  G  G  D  Y  Y  G  P  F  E  F  W  G  Q  G  T  Q  V  T  V  S  
                    Query_10048  275  CCGCCATGTATTATTGTGTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTCTGGGGCCAGGGAACCCAGGTCACCGTCTCCT  364
V  90.5% (266/294)  IGHV5-51*01  272  .............C....C.....------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  86.7% (13/15)    IGHD2-21*02  11   -----------------------------.....T....G....----------------------------------------------  25
J  93.0% (40/43)    IGHJ4*02     6    --------------------------------------------------.....C.A.................T..............  45

                                         
                                      S  
                    Query_10048  365  CAG  367
J  93.0% (40/43)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_159234

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           336     1e-94
IGHD5-12*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGAGTGCCCGGACA	TGGATATAGCGGCTACG	GGTT	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGAGTGCCCGGACATGGATATAGCGGCTACGGGTTCTATTTAGACTAT	ARRVPGHGYSGYGFYLDY	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  S  G  D  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_10049  1    ACCCTGTCCCTCACCTGCACTGTCTCCGGTGCCTCCATCAGCAGTGGTGACTACTACTGGATCTGGATCCGCCAGCACCCCGGGAAGGGC  90
V  93.2% (232/249)  IGHV4-31*03  49   ..........................T....G.................GT..........G..................A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  D  W  I  G  S  I  Y  Y  S  G  S  T  H  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_10049  91   CTGGACTGGATTGGGTCCATCTATTACAGTGGGAGCACCCACTACAACCCGTCCCTCAAGAGTCGCGTTACAATGTCGGTAGACACGTCT  180
V  93.2% (232/249)  IGHV4-31*03  139  .....G..........A......................T.........................A.....C..A..A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  N  Q  F  S  L  T  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  V  P  G  H  G  Y 
                    Query_10049  181  AAGAACCAGTTCTCCCTGACCCTGAACTCTGTGACGGCCGCGGACACGGCCGTGTATTACTGTGCGAGAAGAGTGCCCGGACATGGATAT  270
V  93.2% (232/249)  IGHV4-31*03  229  ...................AG....G.........T.................................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.1% (16/17)    IGHD5-12*01  2    -----------------------------------------------------------------------------------.......  8

                                      -IMGT--------------------->                                  
                                       S  G  Y  G  F  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10049  271  AGCGGCTACGGGTTCTATTTAGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  94.1% (16/17)    IGHD5-12*01  9    ..T.......---------------------------------------------------  18
J  93.6% (44/47)    IGHJ4*02     2    --------------...C..T.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_159236

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            385     4e-109
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	248	2	0	99.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10050  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.2% (248/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_10050  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  99.2% (248/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_10050  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  99.2% (248/250)  IGHV3-7*01   227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10050  271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_159230

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           315     5e-88
IGHD6-13*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GTCC	ATAGCAGCAGCTGGT	N/A	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTCCATAGCAGCAGCTGGTACTTCTTTGACTAC	AVHSSSWYFFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  N  H  V  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10051  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGACTCACCTTTAGTAACCATGTCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTAG  90
V  91.0% (223/245)  IGHV3-23*01  47   ............................T...T..........C.G.T...C....................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  A  G  S  T  Y  H  A  D  F  V  K  D  R  F  T  I  S  R  D  N  S  
                    Query_10051  91   AGTGGGTCTCTGCAATTAGTGGAAGTGCTGGTAGCACATATCATGCAGACTTCGTGAAGGACCGGTTCACCATTTCCAGAGACAATTCCA  180
V  91.0% (223/245)  IGHV3-23*01  137  ..........A..T........T....G............CT.C.......C........G............C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  K  T  L  S  L  Q  M  N  S  L  T  D  E  D  T  A  V  Y  Y  C  A  V  H  S  S  S  W  Y  F  
                    Query_10051  181  AGAAAACGCTGTCTCTGCAAATGAACAGTCTGACAGACGAGGACACGGCCGTATATTACTGTGCGGTCCATAGCAGCAGCTGGTACTTCT  270
V  91.0% (223/245)  IGHV3-23*01  227  ....C.......A...............C....G..C............................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (15/15)   IGHD6-13*01  5    ---------------------------------------------------------------------...............------  19
J  97.9% (47/48)    IGHJ4*02     1    ------------------------------------------------------------------------------------...A..  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10051  271  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.9% (47/48)    IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_159233

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           364     5e-103
IGHD1-26*01                                                                                           12.2    32    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-26*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GGGGA	AGTGGG	CGCCTCGAGGGCG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGGGGGAAGTGGGCGCCTCGAGGGCGTTGACTAC	PQGEVGASRALTT	248	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	247	114	111	2	1	97.4
CDR3-IMGT (germline)	248	254	7	6	1	0	85.7
Total	N/A	N/A	255	246	8	1	96.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  F  I  Y  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10052  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCTTTCATTTACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.5% (246/255)  IGHV3-15*01  47   .......T...........................A......G.A.............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  T  N  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_10052  91   AGTGGGTTGGCCGTATTAAAAGCAAAACTAATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  96.5% (246/255)  IGHV3-15*01  137  .............................G............................................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      D  S   K  T  R  C  I  C  K  *  I  A  *  K  P  R  T  H  P  C  I  T  V  P  Q  G  E  V  G  A 
                    Query_10052  181  ATTC-AAAAACACGCTGTATCTGCAAATGAATAGCCTGAAAACCGAGGACACATCCGTGTATTACTGTGCCACAGGGGGAAGTGGGCGCC  269
V  96.5% (246/255)  IGHV3-15*01  227  ....A..........................C.....................G..............A......---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (6/6)     IGHD1-26*01  6    --------------------------------------------------------------------------------......----  11

                                      GT-------------->                                  
                                       S  R  A  L  T  T  G  G  R  D  P  W  S  P  S  P  Q 
                    Query_10052  270  TCGAGGGCGTTGACTACTGGGGGCAGGGACCCCTGGTCACCGTCTCCTCAG  320
J  95.2% (40/42)    IGHJ4*02     7    ---------.............C......A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_159232

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           201     9e-54
IGHD2-15*01                                                                                           14.1    8.7  
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-15*01	IGHJ5*02	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	GGGAGAATGTGGGACCTGCATATATTTCGTCTGT	ATATTGT	N/A	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGGGAGAATGTGGGACCTGCATATATTTCGTCTGTATATTGTTTCGACCTC	*GENVGPAYISSVYCFDL	246	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	11	0	0	100
CDR1-IMGT	19	42	24	21	3	0	87.5
FR2-IMGT	43	84	51	39	3	9	76.5
CDR2-IMGT	85	131	47	17	7	23	36.2
FR3-IMGT	132	245	114	102	12	0	89.5
CDR3-IMGT (germline)	246	250	5	4	1	0	80
Total	N/A	N/A	252	194	26	32	77


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  D  Y  A  I  N  W  V  R           R  K  G  L  L  W  V  S  Y  S  
                    Query_10053  8    GTGCAGCCTCTGGATTCACCTTCAGTGATTATGCAATCAACTGGGTCCGCC---------GGAAGGGGCTGCTGTGGGTTTCATACAGTA  88
V  77.0% (194/252)  IGHV3-48*03  65   ..........................AG.....A...G.............AGGCTCCAG...........GA..............T..  154
                                         A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ---------------CDR2-IMGT------------------><----------------------------------------------
                                      S  A  C  E  T  T  I  F  S  A  V  I  Q  P  Y  S  M  L  T  L  *  G  A  D  S  A  S  P  D  T  
                    Query_10053  89   GTGCCTGTGAGACAACAATATTCTCTGCTGTGATACAACCATATTCTATGCTGACTTTGTGAGGGGCCGATTCAGCATCTCCAGACACAA  178
V  77.0% (194/252)  IGHV3-48*03  155  ..A-----------------------.TA...G..GT.......A...C..A....C.....A...........C..........G....  221
                                      S                         S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N

                                      ------FR3-IMGT----------------------------------------------------><----------------------
                                      T  P  R  T  H  C  L  C  K  *  T  A  C  Q  A  R  T  R  L  F  I  T  V  *  G  E  N  V  G  P  
                    Query_10053  179  CGCCAAGAACTCATTGTCTCTGCAAATGAACAGCCTGTCAGGCGAGGACACGGCTGTTTATTACTGTGTGAGGGGAGAATGTGGGACCTG  268
V  77.0% (194/252)  IGHV3-48*03  222  .............C...A...................AG..C..........................C...------------------  293
                                        A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                     

                                      CDR3-IMGT---------------------->                                  
                                      A  Y  I  S  S  V  Y  C  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10053  269  CATATATTTCGTCTGTATATTGTTTCGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  100.0% (7/7)     IGHD2-15*01  4    ----------------.......-------------------------------------------  10
J  97.7% (42/43)    IGHJ5*02     9    -----------------------.......C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_160860

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           338     4e-95
IGHD1-1*01                                                                                            16.1    2.1  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	AAACA	ACAACTGG	CGC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCAGAAAACAACAACTGGCGCAC	TRKQQLAH	249	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	235	19	0	92.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  C  S  G  F  A  F  A  D  D  A  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_10054  1    GGTCCCTGAGACTCTCCTGTACATGTTCTGGATTCGCCTTTGCTGATGATGCTATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.5% (235/254)  IGHV3-49*04  47   .......................GC..........A......G....T........A.................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  A  V  I  R  S  K  N  Y  D  G  T  T  E  F  A  A  S  V  K  G  R  F  A  I  S  R  D  
                    Query_10054  91   AGTGGGTAGCCGTCATCAGAAGCAAAAATTATGATGGGACAACAGAATTTGCCGCGTCTGTGAAAGGCAGATTCGCCATCTCAAGAGATG  180
V  92.5% (235/254)  IGHV3-49*04  137  .........GTT....T.........GC.....G..............AC........................A...............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------CDR3-IMGT-----
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  K  Q  Q  L  A  
                    Query_10054  181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAAGACACAGCCGTGTATTATTGTACCAGAAAACAACAACTGGCGC  270
V  92.5% (235/254)  IGHV3-49*04  227  ..............................................G.................C.....T...----------------  300
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (8/8)     IGHD1-1*01   4    -------------------------------------------------------------------------------........---  11

                                      ->                                  
                                      H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10054  271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (36/36)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_160861

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           290     2e-80
IGHD6-19*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGGGCAAG	ATAGTAGTGGCTGG	GGCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGAAGGGCAAGATAGTAGTGGCTGGGGCTACTACTTTGACACC	VREGQDSSGWGYYFDT	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	218	33	0	86.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  V  S  S  G  F  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10055  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGGTCCGTCAGTAGTGGTTTTTATTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  86.9% (218/251)  IGHV4-61*01  49   ...................C............C........C......AG...C..C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  D  W  I  G  N  V  Y  A  T  G  R  T  K  L  K  S  S  L  T  S  R  V  S  M  S  V  D  K  A 
                    Query_10055  91   CTGGACTGGATTGGCAATGTCTATGCCACTGGGAGAACCAAATTGAAGTCCTCCCTCACGAGTCGAGTCAGCATGTCCGTAGACAAGGCC  180
V  86.9% (218/251)  IGHV4-61*01  139  .....G........GT..A.....TA..G......C.....C.AC..CC.........A...........C...A..A.......C.T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  L  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  V  R  E  G  Q  D  S  S  G 
                    Query_10055  181  AAGAACCTGTTCTCCCTGAAACTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTTTTGTGTGCGAGAAGGGCAAGATAGTAGTGGC  270
V  86.9% (218/251)  IGHV4-61*01  229  .......A............G....G................................AC....C.A....-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD6-19*01  5    -------------------------------------------------------------------------------....C......  15

                                      GT------------------>                                  
                                       W  G  Y  Y  F  D  T  W  G  P  G  T  L  V  T  V  S  S  
                    Query_10055  271  TGGGGCTACTACTTTGACACCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  325
D  92.9% (13/14)    IGHD6-19*01  16   ...----------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*02     1    -------...........TA........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_160862

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            325     3e-91
IGHD1-26*01                                                                                           14.1    8.5  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGATA	TTA	GGGAGCT	TG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGGATATTAGGGAGCTTGACTTCTTCTACTACGGTATGGACGTC	AKDIRELDFFYYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	252	10	9	1	0	90
Total	N/A	N/A	252	230	22	0	91.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  T  G  F  N  F  E  N  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10056  1    GGTCCCTGAGACTCTCCTGTGCAGGCACTGGATTCAACTTTGAAAATTATGCCATACACTGGGTCCGGCAAGCTCCCGGGAAGGGCCTGG  90
V  91.3% (230/252)  IGHV3-9*01   47   ........................C.T.........C......TG..........G....................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  T  W  N  S  D  N  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10056  91   AGTGGGTCGCAGGTATTACTTGGAACAGTGATAACATCGGTTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  91.3% (230/252)  IGHV3-9*01   137  ........T.........G......T....G..G...A..C................................................A  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      E  N  S  V  Y  L  Q  M  D  S  L  R  P  E  D  T  A  L  Y  F  C  A  K  D  I  R  E  L  D  F  
                    Query_10056  181  AGAACTCCGTCTATCTGCAGATGGACAGTCTGAGACCTGAGGACACGGCCTTGTATTTCTGTGCAAAGGATATTAGGGAGCTTGACTTCT  270
V  91.3% (230/252)  IGHV3-9*01   227  ........C.G........A...A...........G.....................A.........A....------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (7/7)     IGHD1-26*01  9    ---------------------------------------------------------------------------.......--------  15
J  94.6% (53/56)    IGHJ6*02     4    ------------------------------------------------------------------------------------...A..  9

                                      T------------------>                              
                                      F  Y  Y  G  M  D  V  W  G  Q  G  T  P  V  T  V  S 
                    Query_10056  271  TCTACTACGGTATGGACGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCC  320
J  94.6% (53/56)    IGHJ6*02     10   A..................................A..............  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_160864

Length=413
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           405     4e-115
IGHD3-22*01                                                                                           33.4    2e-05 
IGHJ4*01                                                                                              71.8    1e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	ACGT	TATTACTACGATAGTAGTGCTTA	CCGCGAGGAGTATCCTTTCATTTTTCTGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAACGTTATTACTACGATAGTAGTGCTTACCGCGAGGAGTATCCTTTCATTTTTCTGAACGACTAC	ARERYYYDSSAYREEYPFIFLNDY	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  Q  P  G  E  S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y
                    Query_10057  1    GCAGCTGGTGCAGTCTGGGGGAGGCTTGGTACAGCCTGGAGAGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGATTA  90
V  94.5% (275/291)  IGHV3-48*03  6    ..........G..............................G...........................................AG...  95
                                        Q  L  V  E  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  I  S  H  I  S  S  D  G  D  D  I  Y  Y  A  D
                    Query_10057  91   TGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGATTTCACACATTAGTAGTGATGGTGATGACATTTACTACGCAGA  180
V  94.5% (275/291)  IGHV3-48*03  96   ..............................................G.....T...........AG....AG.AC...A...........  185
                                        E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  V  N  S  L  R  A  E  D  T  A
                    Query_10057  181  CTCTGTGAAGGGCCGATTCACAATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAGTGAACAGCCTGAGAGCCGAGGACACGGC  270
V  94.5% (275/291)  IGHV3-48*03  186  .....................C.......................................A............................  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><-------------------------------CDR3-IMGT------------------------------>     
                                        V  Y  Y  C  A  R  E  R  Y  Y  Y  D  S  S  A  Y  R  E  E  Y  P  F  I  F  L  N  D  Y  W  G
                    Query_10057  271  TGTTTATTACTGTGCGAGGGAACGTTATTACTACGATAGTAGTGCTTACCGCGAGGAGTATCCTTTCATTTTTCTGAACGACTACTGGGG  360
V  94.5% (275/291)  IGHV3-48*03  276  ..................A..---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  91.3% (21/23)    IGHD3-22*01  2    -------------------------........T..........G...------------------------------------------  24
J  97.5% (39/40)    IGHJ4*01     9    -------------------------------------------------------------------------------...........  19

                                                                   
                                        H  G  T  L  V  T  V  S  S  
                    Query_10057  361  CCACGGAACCCTGGTCACCGTCTCCTCAG  389
J  97.5% (39/40)    IGHJ4*01     20   ...A.........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40498920


Query= Query_160865

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10058  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_10058  91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_10058  181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10058  271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_160866

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         427     1e-121
IGHD3-22*01                                                                                           19.9    0.18  
IGHJ3*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CCCCCC	TACTCTCATAGCAGTGGTT	CCTACCCTTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACCCCCCTACTCTCATAGCAGTGGTTCCTACCCTTATGATGCTTTTCATATC	AGPPYSHSSGSYPYDAFHI	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	113	1	0	99.1
CDR3-IMGT (germline)	292	297	6	5	1	0	83.3
Total	N/A	N/A	293	283	10	0	96.6


Alignments

                                        <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                           M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  R  I  S  C  K  G  S  G  F  S  F  A  
                    Query_10059    5    AAATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGACTCTCTGAGGATCTCCTGTAAGGGTTCTGGATTCAGCTTTGCCA  94
V  96.6% (283/293)  IGHV5-10-1*01  2    ..G...........................................G...............................A.......A...  91
                                           V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  

                                        T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                        S  Y  W  V  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  T  Y  S  Y  T  N  Y  
                    Query_10059    95   GCTACTGGGTCAGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTACTTACTCTTATACCAACTACA  184
V  96.6% (283/293)  IGHV5-10-1*01  92   ........A....C.......................................................G.G..................  181
                                        S  Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  

                                        ----------------------------------------------FR3-IMGT------------------------------------
                                        S  P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_10059    185  GCCCGTCCTTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCATCACCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  96.6% (283/293)  IGHV5-10-1*01  182  ................................................G.........................................  271
                                        S  P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                        ----------------><-----------------------CDR3-IMGT----------------------->                
                                        T  A  M  Y  Y  C  A  G  P  P  Y  S  H  S  S  G  S  Y  P  Y  D  A  F  H  I  W  G  Q  G  T  
                    Query_10059    275  CCGCCATGTATTACTGTGCGGGACCCCCCTACTCTCATAGCAGTGGTTCCTACCCTTATGATGCTTTTCATATCTGGGGCCAAGGGACAA  364
V  96.6% (283/293)  IGHV5-10-1*01  272  ....................A..-------------------------------------------------------------------  294
                                        T  A  M  Y  Y  C  A  R                                                                    
D  84.2% (16/19)    IGHD3-22*01    5    -----------------------------....A.G....T.......------------------------------------------  23
J  98.0% (49/50)    IGHJ3*02       1    ----------------------------------------------------------..........G.....................  32

                                                          
                                        M  V  T  V  S  S  
                    Query_10059    365  TGGTCACCGTCTCTTCAG  382
J  98.0% (49/50)    IGHJ3*02       33   ..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_160867

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           367     6e-104
IGHD6-6*01                                                                                            19.9    0.17  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTAG	GAACCTGGTCTTC	GAGTATAGAGGCTCGT	GGGACCAGATAAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGGAACCTGGTCTTCGAGTATAGAGGCTCGTGGGACCAGATAAAATACGGAATGGACGTC	TRNLVFEYRGSWDQIKYGMDV	249	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	244	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  D  D  Y  T  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10060  1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGATGATTATACTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (244/253)  IGHV3-49*04  47   ..........................................G.......G.......................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  L  I  E  S  K  A  Y  G  G  T  T  K  Y  A  A  S  V  K  A  R  F  T  I  S  R  D  
                    Query_10060  91   AGTGGGTAGGTCTCATTGAAAGCAAAGCTTATGGTGGGACCACAAAATACGCCGCGTCTGTGAAAGCCAGATTCACCATCTCAAGAGATG  180
V  96.4% (244/253)  IGHV3-49*04  137  ...........T.....AG.....................A...G.....................G.......................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  R  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  N  L  V  F  E  
                    Query_10060  181  ATTCCAGAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGGAACCTGGTCTTCGAGT  270
V  96.4% (244/253)  IGHV3-49*04  227  ......A..................................................................-----------------  299
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  87.5% (14/16)    IGHD6-6*01   1    --------------------------------------------------------------------------------------....  4

                                      -----CDR3-IMGT-------------------------->                                 
                                      Y  R  G  S  W  D  Q  I  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10060  271  ATAGAGGCTCGTGGGACCAGATAAAATACGGAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
D  87.5% (14/16)    IGHD6-6*01   5    ....CA......--------------------------------------------------------------  16
J  97.9% (47/48)    IGHJ6*02     15   --------------------------.....T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_37295

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD3-16*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10061  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (227/249)  IGHV4-61*01  49   .......................C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S 
                    Query_10061  91   CTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  91.2% (227/249)  IGHV4-61*01  139  ....A.........GT............G......CAC..A.........................G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y 
                    Query_10061  181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTAT  270
V  91.2% (227/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------------.....  28

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_10061  271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
D  100.0% (7/7)     IGHD3-16*02  29   ..--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_37294

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         343     2e-96
IGHD2-2*02                                                                                            23.8    0.011
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	GGATTTTGTAGTGGTATCCGGTGCTTTACC	GGGGTAG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGGATTTTGTAGTGGTATCCGGTGCTTTACCGGGGTAGGGTTCGTCCCC	AREGFCSGIRCFTGVGFVP	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	30	25	2	3	83.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	251	237	11	3	94.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  P  V  S  G  D  S  I  S  S  G     Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10062    1    ACCCTGTCCCTCACCTGCCCTGTCTCTGGTGACTCCATCAGCAGTGGG---TACTCCTGGAGCTGGATCCGGCAGCCACCGGGGAAGGGC  87
V  94.4% (237/251)  IGHV4-30-2*01  49   ..................G............G...............TGGT.............................A.........  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  R  S 
                    Query_10062    88   CTGGAGTGGATTGGGTACATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGGGTCACCATTTCATTAGACAGGTCC  177
V  94.4% (237/251)  IGHV4-30-2*01  139  .................................................................A........A...G...........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                         T  N  Q  V  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  F  C  S  G  I 
                    Query_10062    178  ACGAACCAGGTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTACTGTGCCAGAGAGGGATTTTGTAGTGGTATC  267
V  94.4% (237/251)  IGHV4-30-2*01  229  .A.......T................C.............................T..............-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  80.0% (24/30)    IGHD2-2*02     2    ------------------------------------------------------------------------....A.......A...C.  19

                                        3-IMGT----------------------->                                  
                                         R  C  F  T  G  V  G  F  V  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10062    268  CGGTGCTTTACCGGGGTAGGGTTCGTCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  80.0% (24/30)    IGHD2-2*02     20   A.C....A....----------------------------------------------------  31
J  97.8% (44/45)    IGHJ5*02       7    -------------------......A......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_37297

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-3*02                                                                                            14.1    8.9  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AC	GCAATTTTGTTGTGGT	ACTTTCTGCCACTCTCTGGGCGCGGGGGGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAACGCAATTTTGTTGTGGTACTTTCTGCCACTCTCTGGGCGCGGGGGGGTCTGACTAC	AKTQFCCGTFCHSLGAGGSDY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  N  N  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10063  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAACAACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (234/248)  IGHV3-23*01  47   ....................................C.....G..G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  A  S  G  G  A  T  T  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  S  
                    Query_10063  91   AGTGGGTCTCAGGTATTAGTGCTAGTGGTGGTGCCACAACCTACGCAGACTCCGTGAAGGGCCGGTTCATCATCTCCAGAGACAATTCCA  180
V  94.4% (234/248)  IGHV3-23*01  137  ............C........G..........AG....TA.............................C....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  T  Q  F  C  C  G  T  
                    Query_10063  181  AGAACACACTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATATTACTGTGCGAAAACGCAATTTTGTTGTGGTACTT  270
V  94.4% (234/248)  IGHV3-23*01  227  .......G....A.....................................G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  81.2% (13/16)    IGHD3-3*02   7    ----------------------------------------------------------------------...T.....GA.....----  22

                                      DR3-IMGT-------------------------->                                  
                                      F  C  H  S  L  G  A  G  G  S  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_10063  271  TCTGCCACTCTCTGGGCGCGGGGGGGTCTGACTACTGGGGCCAGGGAACCCTGGTCAGCGTCTCCTCAG  339
J  97.6% (40/41)    IGHJ4*02     8    ----------------------------.............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_37296

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            321     6e-90
IGHD3-3*02                                                                                            12.2    31   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTT	GCATTT	CGATCTCCCACGAGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGCATTTCGATCTCCCACGAGGCATGGACGTC	ARLHFDLPRGMDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  T  V  S  G  G  S  I  T  S  T  Y  W  W  N  W  V  R  Q  P  P  G  K  G  
                    Query_10064  1    GGTCCCTGAGACTCTCCTGCACTGTGTCTGGGGGCTCCATCACCAGTACTTACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGAC  90
V  91.5% (226/247)  IGHV4-4*01   47   ..A.....TCC...A.....G....C.....T..........G.....G.A.........G...........................G.  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  S  G  S  P  H  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  K  S  
                    Query_10064  91   TGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCCCCCACTACAGTCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCA  180
V  91.5% (226/247)  IGHV4-4*01   137  ...................................A..A......AC...........................................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  W  C  A  R  L  H  F  D  L  P  R  
                    Query_10064  181  AGAACCAGTTCTCCCTGAAGTTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTGGTGTGCGAGGTTGCATTTCGATCTCCCACGAG  270
V  91.5% (226/247)  IGHV4-4*01   227  ....................C....C.............................T..C........-----------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                          
D  100.0% (6/6)     IGHD3-3*02   7    ----------------------------------------------------------------------......--------------  12

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  A  I  V  S  S 
                    Query_10064  271  GCATGGACGTCTGGGGCCAAGGGACCACGGCCATCGTCTCCTCA  314
J  95.2% (40/42)    IGHJ6*02     21   --............................T..C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_37291

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         297     7e-83
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	GGAGTCGTAATTAT	CATGGGAATTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGAGTCGTAATTATCATGGGAATTTCTACTTCGACCAC	ARGSRNYHGNFYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	220	30	0	88


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  D  S  V  Y  Y  S  L  N  W  I  R  Q  T  P  L  K  G 
                    Query_10065    1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCATCGACAGTGTTTACTACTCCTTAAACTGGATCCGGCAGACACCACTGAAGGGC  90
V  88.0% (220/250)  IGHV4-30-2*01  49   .......................C...............AG.....G.GGT.......GG.G.............C.....GG.......  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Q  H  S  G  A  T  Y  Y  N  P  S  L  E  S  R  V  S  L  S  V  D  R  S 
                    Query_10065    91   CTGGAGTGGATTGGCTACATCCAGCATTCTGGGGCCACCTACTACAACCCGTCCCTCGAGAGTCGGGTCTCCCTTTCAGTAGACCGGTCC  180
V  88.0% (220/250)  IGHV4-30-2*01  139  ..............G......T.T...AG....AG......................A.......A...A..A.A.........A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  S  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  R  N  Y  H  G 
                    Query_10065    181  AAGAGCCAGTTCTCCCTGAGGCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGAGGGAGTCGTAATTATCATGGG  270
V  88.0% (220/250)  IGHV4-30-2*01  229  ....A..............A.....G...........................G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  85.7% (12/14)    IGHD3-3*01     15   ----------------------------------------------------------------------.....G..T.....------  28

                                        ----------------->                                  
                                         N  F  Y  F  D  H  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_10065    271  AATTTCTACTTCGACCACTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTCAG  322
J  91.5% (43/47)    IGHJ4*02       2    -----......T...T...............C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_37290

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           308     4e-86
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGCG	GGCTGG	G	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCTGGGAACTGGTTCGACCCC	ARGRRAGNWFDP	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	223	26	0	89.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  V  P  G  K  G  
                    Query_10066  4    CCCTGAGACTCTCCTGTAGTGTCTCAGGTGGCTCCATCAGTAGTGGGGCTTACTACTGGAGTTGGATCCGCCAGGTCCCAGGGAAGGGCC  93
V  89.6% (223/249)  IGHV4-31*01  50   .....TCC...A....C.C......T..............C.....T.G............C............CA..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  G  E  N  T  Q  Y  N  P  S  L  K  S  L  V  T  I  S  G  D  T  S  
                    Query_10066  94   TGGAGTGGATTGGATACATCTATTACGGTGAGAATACCCAGTACAACCCGTCCCTCAAGAGTCTGGTTACCATATCAGGAGACACCTCTA  183
V  89.6% (223/249)  IGHV4-31*01  140  .............G............A...G..GC...T.C.......................A.............T......G....  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      T  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  W  
                    Query_10066  184  CGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCTGGGAACTGGT  273
V  89.6% (223/249)  IGHV4-31*01  230  A.................A.................................G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD6-19*01  13   ----------------------------------------------------------------------------......--------  18
J  93.9% (46/49)    IGHJ5*02     3    -----------------------------------------------------------------------------------.......  9

                                      ------->                                  
                                      F  D  P  W  G  H  G  I  L  V  T  V  T  S  
                    Query_10066  274  TCGACCCCTGGGGCCACGGAATCCTGGTCACCGTCACCTCAG  315
J  93.9% (46/49)    IGHJ5*02     10   ................G....C.............T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_37293

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           294     6e-82
IGHD3-3*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTCAA	GGAGTTCC	AGTAGTTATTAT	GTCGGGTTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGGAGTTCCAGTAGTTATTATGTCGGGTTGGACTACTTTGAAAAC	SRSSSSYYVGLDYFEN	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	24	17	4	3	70.8
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	243	4	3	1	0	75
Total	N/A	N/A	246	219	24	3	89


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  S  F  H  W  F  R  Q  A  P  G  K  G  L  
                    Query_10067  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCGATGACTATAGTTTCCACTGGTTCCGTCAAGCTCCGGGGAAGGGTCTGG  90
V  89.0% (219/246)  IGHV3-43*01  47   .....................................C..T.....T....CCA.G......G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  V  G  W  D  G     T  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10067  91   AGTGGGTCTCTTTCGTTGGTTGGGATGGG---ACCACAGACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCG  177
V  89.0% (219/246)  IGHV3-43*01  137  ...........C.TA..A..........TGGT.G....T..................................................A  226
                                      E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      D  N  S  L  F  L  Q  M  T  G  L  R  I  E  D  T  A  L  Y  Y  C  S  R  S  S  S  S  Y  Y  V  
                    Query_10067  178  ACAACTCCCTCTTTCTGCAAATGACTGGTCTGAGAATTGAGGACACCGCCTTGTATTACTGTTCAAGGAGTTCCAGTAGTTATTATGTCG  267
V  89.0% (219/246)  IGHV3-43*01  227  .A........G.A...........ACA.........C.........................G...------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A                          
D  91.7% (11/12)    IGHD3-3*01   17   --------------------------------------------------------------------------...G........----  28

                                      T------------------>                                 
                                      G  L  D  Y  F  E  N  W  G  Q  G  T  L  V  T  V  P  S 
                    Query_10067  268  GGTTGGACTACTTTGAAAACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCA  320
J  93.6% (44/47)    IGHJ4*02     1    ------..........CT.............................T.....  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_37292

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	ATGCGT	TATATCAGTGGC	CGTGTCGATCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAATGCGTTATATCAGTGGCCGTGTCGATCCATTTGACTAC	AKMRYISGRVDPFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10068  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-23*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  V  S  G  G  G  A  S  R  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10068  91   AGTGGGTCTCAGCTGTTAGTGGTGGTGGTGCTAGCAGATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  95.2% (236/248)  IGHV3-23*01  137  ..............A........A......G.....C................................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  A  L  R  A  G  D  T  A  V  Y  F  C  A  K  M  R  Y  I  S  G  R  
                    Query_10068  181  AGAACACGCTGTATCTCCAAATGAACGCCTTGAGAGCCGGGGACACGGCCGTATATTTCTGTGCGAAAATGCGTTATATCAGTGGCCGTG  270
V  95.2% (236/248)  IGHV3-23*01  227  ................G.........AG.C.........A.................A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  91.7% (11/12)    IGHD6-19*01  4    --------------------------------------------------------------------------....G.......----  15

                                      ---------------->                                  
                                      V  D  P  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10068  271  TCGATCCATTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  321
J  97.7% (42/43)    IGHJ4*02     6    --------.....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_69241

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            346     2e-97
IGHJ2*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	N/A	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	GCACGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCACGGATCCTGGTGCTTCGATTTC	ARHGSWCFDF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10069  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTGACTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.7% (234/247)  IGHV3-7*03   47   ............................................AG............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  T  D  G  S  T  Q  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_10069  91   AGTGGGTGGCCAACATAAAGACAGATGGAAGTACTCAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACCCCA  180
V  94.7% (234/247)  IGHV3-7*03   137  ....................CA..........GAGA..................................................G...  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      T  N  S  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  H  G  S  W  C  F  D  
                    Query_10069  181  CGAACTCACTGTATTTGCAACTGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGGCACGGATCCTGGTGCTTCGATT  270
V  94.7% (234/247)  IGHV3-7*03   227  A.............C.....A..............................................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  94.0% (47/50)    IGHJ2*01     4    ----------------------------------------------------------------------------.....A.......C  17

                                      ->                                  
                                      F  W  G  R  G  T  L  V  S  V  S  S  
                    Query_10069  271  TCTGGGGCCGTGGCACCCTGGTCAGTGTCTCCTCAG  306
J  94.0% (47/50)    IGHJ2*01     18   ........................C...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_69243

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACAGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACAGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10070  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.6% (225/243)  IGHV4-34*01  49   ................................G...T..................G...........................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  P  L  S  L  D  M  S  K  K 
                    Query_10070  91   TGGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGCGTCCCCTTATCATTAGACATGTCCAAGAAG  180
V  92.6% (225/243)  IGHV4-34*01  139  .............................C..................C..A.......A...A..A.....G......C.........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  V  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y 
                    Query_10070  181  CAGTTCTCCGTGAAGGTGACGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAACAGTAAAGGGGGTTATTACTGTCTAC  270
V  92.6% (225/243)  IGHV4-34*01  229  .........C.....C...GC..........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  20   --------------------------------------------------------------------------..........------  29

                                      -------------------->                                 
                                       Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10070  271  CAGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  100.0% (40/40)   IGHJ6*02     23   --------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_84236

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           346     2e-97
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AC	ATTACGATTTTTCGAGTGGT	CTCATTATCGGAAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACATTACGATTTTTCGAGTGGTCTCATTATCGGAACTGACTAC	AREHYDFSSGLIIGTDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  R  G  S  Y  Y  W  S  W  N  R  Q  S  P  G  K  G 
                    Query_10071  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGAGGTTCTTACTACTGGAGTTGGAACCGGCAGTCCCCAGGGAAGGGA  90
V  94.0% (236/251)  IGHV4-61*01  49   .........................................C..T...AG............C....T.......C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  H  S  G  S  T  N  Y  H  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_10071  91   CTGGAGTGGATTGGGTATATTTATCACAGTGGGAGCACCAACTATCACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCC  180
V  94.0% (236/251)  IGHV4-61*01  139  ....................C...T...................CA................................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  H  Y  D  F  S  S 
                    Query_10071  181  AAGAACCAGTTCTCCCTGAAGCTGAATTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGAACATTACGATTTTTCGAGT  270
V  94.0% (236/251)  IGHV4-61*01  229  .........................GC..........................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-3*01   3    -------------------------------------------------------------------------............G....  19

                                      MGT-------------------->                                  
                                       G  L  I  I  G  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10071  271  GGTCTCATTATCGGAACTGACTACTGGGGCCAGGGTACCCTGGTCACCGTCTCCTCAG  328
D  95.0% (19/20)    IGHD3-3*01   20   ...-------------------------------------------------------  22
J  97.6% (40/41)    IGHJ4*02     8    -----------------..................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_37299

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            357     1e-100
IGHD6-13*01                                                                                           21.8    0.040 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCGAGGG	GCAGCAGTTGGTAC	CATT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCGAGGGGCAGCAGTTGGTACCATTCTACGTTGACTCC	ARFEGQQLVPFYVDS	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	237	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10072  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGATCCATTAGTAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  96.3% (237/246)  IGHV4-4*02   49   ................................C.....C..C................................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_10072  91   GAGTGGATTGGTGAAATCCATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCTAAG  180
V  96.3% (237/246)  IGHV4-4*02   139  ...........G......T...................................................................C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  E  G  Q  Q  L  V  P 
                    Query_10072  181  AACCACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGATTCGAGGGGCAGCAGTTGGTACCA  270
V  96.3% (237/246)  IGHV4-4*02   229  .....G...........G....G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  92.9% (13/14)    IGHD6-13*01  8    --------------------------------------------------------------------------.......C......--  21

                                      -------------->                                  
                                       F  Y  V  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10072  271  TTCTACGTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  95.7% (45/47)    IGHJ4*02     2    --....T......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_69247

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           341     6e-96
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCT	TTACTATGATAGTAGTGCTTA	CTATGCCTCTTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCTTTACTATGATAGTAGTGCTTACTATGCCTCTTTCTACGTTCTGGACGTC	ARELYYDSSAYYASFYVLDV	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  T  V  S  L  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_10073  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCACCGTCAGTCTTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  93.6% (234/250)  IGHV4-61*01  50   .....TCC...A....................T.......CAG...............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  V  Y  F  N  G  N  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  
                    Query_10073  94   TGGAGTGGATTGGGTATGTCTATTTCAATGGGAACACCAATTACAACCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCA  183
V  93.6% (234/250)  IGHV4-61*01  140  .................A......A..G.....G......C........................G........................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  L  Y  Y  D  S  S  
                    Query_10073  184  AGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGAGCTTTACTATGATAGTAGTG  273
V  93.6% (234/250)  IGHV4-61*01  230  ....................C...............................G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  95.2% (20/21)    IGHD3-22*01  4    -------------------------------------------------------------------------.................  20

                                      R3-IMGT------------------------>                                 
                                      A  Y  Y  A  S  F  Y  V  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10073  274  CTTACTATGCCTCTTTCTACGTTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  338
D  95.2% (20/21)    IGHD3-22*01  21   G...-------------------------------------------------------------  24
J  95.9% (47/49)    IGHJ6*02     14   ----------------.....G.A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_69246

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD2-21*02                                                                                           10.3    115  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GG	GACTG	ACCCACTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGACTGACCCACTCCTACTTTGAGTCC	ARGLTHSYFES	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  N  N  Y  Y  W  N  W  I  R  H  P  P  G  K  G  L  E 
                    Query_10074  1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAATAATTACTACTGGAACTGGATCCGGCACCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ...........................G............G..G...........G............G.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  R  N 
                    Query_10074  91   TGGATTGGGTACGTCTATTACAGCGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAGGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ...........TA..........T....G........................................................A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  G  L  T  H  S  Y  F  E  S 
                    Query_10074  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCTCTGCGGACACGGCCGTGTATTACTGTGCGAGGGGACTGACCCACTCCTACTTTGAGTCC  270
V  95.5% (231/242)  IGHV4-59*01  229  ..............................G...............................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD2-21*02  17   ----------------------------------------------------------------.....---------------------  21
J  95.7% (45/47)    IGHJ4*02     2    -----------------------------------------------------------------------------.........C.A.  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10074  271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  95.7% (45/47)    IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_219075

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           277     9e-77
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	242	3	3	0	0	100
Total	N/A	N/A	239	208	31	0	87


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  G  S  I  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_10075  4    CCCTGAGACTCTCCTGCTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAAT  93
V  87.0% (208/239)  IGHV4-59*01  50   .....TCC...A.....A......................T.GT.A...C....G.............C...................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R  
                    Query_10075  94   GGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGAC  183
V  87.0% (208/239)  IGHV4-59*01  140  ......GG.....C.ATT................C..C...........C.....................G.A.............AC.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G  
                    Query_10075  184  ACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGTG  273
V  87.0% (208/239)  IGHV4-59*01  230  .G...........G....G............T..............G............-------------------------------  288
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  93.3% (14/15)    IGHD3-22*01  7    ----------------------------------------------------------------------------..........A...  20

                                      ---------------------->                                  
                                      G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10075  274  GCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  330
D  93.3% (14/15)    IGHD3-22*01  21   .--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    -------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_219577

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ1*01                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CTGGA	TACTCTGATAGTAGTGGTTAT	GCAAAATGCC	TCCAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCTGGATACTCTGATAGTAGTGGTTATGCAAAATGCCTCCAGCGC	AKAGYSDSSGYAKCLQR	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10076  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGTTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-23*01  47   ..............................................C...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10076  91   AGTGGGTCTCAGGTATTAGTGGTAGTGGTGGTACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.8% (241/249)  IGHV3-23*01  137  ............C....................G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      N  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  G  Y  S  D  S  S  
                    Query_10076  181  ACAACACGCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTACTACTGTGCGAAAGCTGGATACTCTGATAGTAGTG  270
V  96.8% (241/249)  IGHV3-23*01  227  .G..........A.......................................A..T.............---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.2% (20/21)    IGHD3-22*01  5    --------------------------------------------------------------------------....A...........  20

                                      GT-------------------->                                  
                                      G  Y  A  K  C  L  Q  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10076  271  GTTATGCAAAATGCCTCCAGCGCTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  327
D  95.2% (20/21)    IGHD3-22*01  21   .....----------------------------------------------------  25
J  97.6% (41/42)    IGHJ1*01     11   ---------------......A...................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_148779

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           357     1e-100
IGHD1-26*01                                                                                           14.1    8.3   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGCCCTTTTA	TGGGGGCTAC	ATGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGCCCTTTTATGGGGGCTACATGGATTGACTAC	ARCPFMGATWIDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  G  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10077  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTTTGGCCTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-33*01  47   ................................................A....A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  A  A  N  I  Y  Y  D  G  N  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10077  91   AGTGGGCGGCAAATATCTACTATGATGGAAATAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (238/248)  IGHV3-33*01  137  ......T....GT...A.GG..........G...........................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  C  P  F  M  G  A  T  
                    Query_10077  181  AGAACACGCTGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGATGCCCTTTTATGGGGGCTACAT  270
V  96.0% (238/248)  IGHV3-33*01  227  ...................A................................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD1-26*01  8    ------------------------------------------------------------------------------....A.....--  17

                                      ---------->                                  
                                      W  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10077  271  GGATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (42/42)   IGHJ4*02     7    ---..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_175530

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           400     9e-114
IGHD3-3*01                                                                                            33.4    2e-05 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGGGGGGCCTT	CGATTTTTGGAGTGGTT	TCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGGGGGGCCTTCGATTTTTGGAGTGGTTTCCACTTTGACTCC	ARLGGAFDFWSGFHFDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  T  S  G  Y  S  F  T  T  H
                    Query_10078  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGCTTTACCACCCA  90
V  94.1% (273/290)  IGHV5-51*01  6    .............................A..................................GG....................G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  M  G  I  I  Y  P  G  V  S  D  T  R  Y  R  P
                    Query_10078  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACATGGGGATCATCTATCCTGGTGTCTCTGATACCAGATACAGACC  180
V  94.1% (273/290)  IGHV5-51*01  96   ........G...................................GG......................A..................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  R  S  L  K  A  W  D  T  A
                    Query_10078  181  GTCCTTCCAAGGCCAAGTCACCATCTCAGCCGACAAGTCCGTCAGTACCGCCTACCTGCAGTGGAGGAGCTTGAAGGCCTGGGACACCGC  270
V  94.1% (273/290)  IGHV5-51*01  186  ...............G........................A....C....................C...C.........C.........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  L  G  G  A  F  D  F  W  S  G  F  H  F  D  S  W  G  Q  G  T  L  V  T  V
                    Query_10078  271  CATGTATTATTGTGCGAGACTAGGGGGGGCCTTCGATTTTTGGAGTGGTTTCCACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGT  360
V  94.1% (273/290)  IGHV5-51*01  276  .........C..........----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD3-3*01   7    ---------------------------------.................----------------------------------------  23
J  97.8% (44/45)    IGHJ4*02     4    -----------------------------------------------------.........A...........................  40

                                              
                                        S  S  
                    Query_10078  361  CTCCTCAG  368
J  97.8% (44/45)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_148777

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           355     3e-100
IGHD3-16*02                                                                                           52.6    2e-11 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AG	ATTATGATTACGTTTGGGGGAGTTATC	TCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGATTATGATTACGTTTGGGGGAGTTATCTCCACTAC	AREDYDYVWGSYLHY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  F  D  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10079  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCGACAGTACTTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*02  49   ..................................C..T.....G...C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  E  D  T  S  K  N 
                    Query_10079  91   TGGATTGGATATATTAATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGAAGACACGTCCAAGAAC  180
V  96.3% (236/245)  IGHV4-59*02  139  ........G.....CT.........................................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  D  Y  D  Y  V  W  G  S 
                    Query_10079  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTACTACTGTGCGAGAGAAGATTATGATTACGTTTGGGGGAGT  270
V  96.3% (236/245)  IGHV4-59*02  229  ..................................................T..............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (27/27)   IGHD3-16*02  3    -------------------------------------------------------------------.......................  25

                                      ----------->                                  
                                       Y  L  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10079  271  TATCTCCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (27/27)   IGHD3-16*02  26   ....------------------------------------------  29
J  100.0% (39/39)   IGHJ4*02     10   -------.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_175532

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACAGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACAGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10080  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.6% (225/243)  IGHV4-34*01  49   ................................G...T..................G...........................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  L  S  L  D  M  S  K  K 
                    Query_10080  91   TGGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGCGTCTCCTTATCATTAGACATGTCCAAGAAG  180
V  92.6% (225/243)  IGHV4-34*01  139  .............................C..................C..A.......A...A..A.....G......C.........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  V  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y 
                    Query_10080  181  CAGTTCTCCGTGAAGGTGACGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAACAGTAAAGGGGGTTATTACTGTCTAC  270
V  92.6% (225/243)  IGHV4-34*01  229  .........C.....C...GC..........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  20   --------------------------------------------------------------------------..........------  29

                                      -------------------->                                 
                                       Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10080  271  CAGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  100.0% (40/40)   IGHJ6*02     23   --------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_148775

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            382     4e-108
IGHD1-26*01                                                                                           14.1    9.0   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCG	GTGGGAG	TCACCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATGCGGTGGGAGTCACCCCCTACTTTGACTAC	ARDAVGVTPYFDY	273	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	158	27	26	1	0	96.3
FR3-IMGT	159	272	114	103	11	0	90.4
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	280	262	18	0	93.6


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  L  V  S  R  N  G  A  A  W  N  W  
                    Query_10081  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACATGTGCCATCTCCGGGGACCTTGTCTCTAGGAACGGTGCTGCTTGGAATTGGA  90
V  93.6% (262/280)  IGHV6-1*01   26   .....................................C..................AG.........C...A.............C....  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  L  R  
                    Query_10081  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATATTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTCTGAGAG  180
V  93.6% (262/280)  IGHV6-1*01   116  ..............................................C....................................G...A.A  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      G  R  I  I  I  S  P  D  T  S  N  N  L  F  S  L  H  L  N  S  V  T  P  E  D  T  A  M  Y  Y  
                    Query_10081  181  GTCGAATAATCATCAGCCCAGACACTTCCAACAACCTCTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTATGTATTACT  270
V  93.6% (262/280)  IGHV6-1*01   206  .........C.....A.........A.....G....AG...........G..............................G.........  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><--------------CDR3-IMGT-------------->                                  
                                      C  A  R  D  A  V  G  V  T  P  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10081  271  GTGCAAGAGATGCGGTGGGAGTCACCCCCTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  345
V  93.6% (262/280)  IGHV6-1*01   296  ..........-----------------------------------------------------------------  305
                                      C  A  R                                                                    
D  100.0% (7/7)     IGHD1-26*01  7    --------------.......------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ----------------------------.........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_148772

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            382     4e-108
IGHD3-22*01                                                                                           14.1    9.9   
IGHJ3*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATATGAGATATCACCG	TGATACTACTGGTCTCTACTAC	GTGGGCACC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATATGAGATATCACCGTGATACTACTGGTCTCTACTACGTGGGCACCTTTGATATC	ARYMRYHRDTTGLYYVGTFDI	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	266	22	0	92.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y 
                    Query_10082  2    CAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATACACCTTCACCACCTAT  91
V  92.4% (266/288)  IGHV1-3*01   7    .....T.............................................................................T.G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  H  W  V  R  Q  A  P  G  Q  R  P  E  W  L  G  W  I  N  A  V  N  A  N  T  K  Y  S  Q 
                    Query_10082  92   GCTATACATTGGGTGCGCCAGGCACCCGGACAAAGACCTGAGTGGCTGGGATGGATCAACGCTGTCAACGCTAACACAAAATATTCGCAG  181
V  92.4% (266/288)  IGHV1-3*01   97   .....G.................C...........G.T.......A..................G...T.G...............A...  186
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  F  Q  G  R  F  T  I  T  M  N  S  S  A  S  T  V  F  M  E  L  S  S  L  R  S  E  D  T  A 
                    Query_10082  182  AACTTCCAGGGCAGATTCACCATTACCATGAACTCATCCGCGAGCACAGTCTTCATGGAGCTGAGCAGCCTTAGATCTGAGGACACGGCT  271
V  92.4% (266/288)  IGHV1-3*01   187  ..G............G............G.G..A...............C..A..................G........A.........  276
                                       K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><--------------------------CDR3-IMGT-------------------------->               
                                       V  Y  Y  C  A  R  Y  M  R  Y  H  R  D  T  T  G  L  Y  Y  V  G  T  F  D  I  W  G  Q  G  T 
                    Query_10082  272  GTCTATTACTGTGCGAGATATATGAGATATCACCGTGATACTACTGGTCTCTACTACGTGGGCACCTTTGATATCTGGGGCCAAGGGACA  361
V  92.4% (266/288)  IGHV1-3*01   277  ..G...............------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  77.3% (17/22)    IGHD3-22*01  10   -----------------------------------.....G..G....TAT......---------------------------------  31
J  97.7% (42/43)    IGHJ3*02     8    ------------------------------------------------------------------........................  31

                                                         
                                       T  V  T  V  S  S  
                    Query_10082  362  ACGGTCACCGTCTCTTCAG  380
J  97.7% (42/43)    IGHJ3*02     32   .T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_175535

Length=417
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            441     6e-126
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	292	360	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	70	5	0	93.3
CDR1-IMGT	79	102	24	24	0	0	100
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	112	2	0	98.2
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	289	7	0	97.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_10083  4    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACC  93
V  97.6% (289/296)  IGHV1-2*04   1    .....G.....G...........G.............AG...................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 
                    Query_10083  94   GGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTAT  183
V  97.6% (289/296)  IGHV1-2*04   91   ..........................................................................................  180
                                       G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  C  M  E  L  S  R  L  R  S  D  D 
                    Query_10083  184  GCACAGAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTGCATGGAGCTGAGCAGGCTGAGATCTGACGAC  273
V  97.6% (289/296)  IGHV1-2*04   181  ..........................................................A...............................  270
                                       A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                      -----------------><-----------------------------CDR3-IMGT----------------------------->   
                                       T  A  V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W 
                    Query_10083  274  ACGGCCGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGG  363
V  97.6% (289/296)  IGHV1-2*04   271  .............A............----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.7% (18/19)    IGHD3-22*01  7    --------------------------------------...........G.......---------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ---------------------------------------------------------------....A......................  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_10083  364  GGCCAAGGGACCACGGTCACCGTCTCCTCA  393
J  98.2% (56/57)    IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40919688


Query= Query_148770

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           310     1e-86
IGHD3-10*01                                                                                           21.8    0.045
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TCAGCCCCGGAGATGGG	ACTCTGGTTCGGGG	CCCCGGAGATGGGACTATGGTTCGAAGAAGGGGCAG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGCCCCGGAGATGGGACTCTGGTTCGGGGCCCCGGAGATGGGACTATGGTTCGAAGAAGGGGCAGCTACGATCTGGACGTC	VSPGDGTLVRGPGDGTMVRRRGSYDLDV	238	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	20	4	0	83.3
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	20	4	0	83.3
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	238	1	1	0	0	100
Total	N/A	N/A	226	212	14	0	93.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  V  S  N  N  Y  M  N  W  I  R  Q  A  P  G  K  G  L  E  W  I  S  Y  I 
                    Query_10084  13   TGTGCAGCCTCTGGGTTCACCGTCAGTAACAACTACATGAACTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGATTTCGTACATT  102
V  93.8% (212/226)  IGHV3-11*01  64   ..............A......T.....G..T.........G.....................................G....A......  153
                                       C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       G  R  S  G  R  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_10084  103  GGTCGCAGTGGTAGAACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTTTATCTG  192
V  93.8% (212/226)  IGHV3-11*01  154  A..A.T........T....................................................................G......  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------------------------------CDR3-IM
                                       Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  S  P  G  D  G  T  L  V  R  G  P  G  D  G 
                    Query_10084  193  CAAATGAACAGCCTGAGAGCCGATGACACGGCCGTCTATTACTGTGTCAGCCCCGGAGATGGGACTCTGGTTCGGGGCCCCGGAGATGGG  282
V  93.8% (212/226)  IGHV3-11*01  244  .......................G...........G..........--------------------------------------------  289
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                                              
D  92.9% (13/14)    IGHD3-10*01  6    ---------------------------------------------------------------...A..........-------------  19

                                      GT------------------------------------>                                 
                                       T  M  V  R  R  R  G  S  Y  D  L  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_10084  283  ACTATGGTTCGAAGAAGGGGCAGCTACGATCTGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  354
J  93.9% (46/49)    IGHJ6*02     14   -----------------------.....G.A.......................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_175537

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*10                                                                                           391     6e-111
IGHD2-15*01                                                                                           10.3    133   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*10	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCTCCTGC	GTAGC	CGAGTCGGTGTG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGATCTCCTGCGTAGCCGAGTCGGTGTGGACTCC	ATDLLRSRVGVDS	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  A  C  K  A  S  G  G  T  F  S  S  S 
                    Query_10085  2    CAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCAGTGAAGGTCGCCTGCAAGGCCTCTGGAGGCACCTTCAGCAGCTCT  91
V  93.1% (270/290)  IGHV1-69*10  7    ......................................................T..........T......................A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  V  P  I  L  E  A  A  K  Y  A  Q 
                    Query_10085  92   TCTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCGTCCCTATACTTGAAGCAGCTAAGTACGCACAG  181
V  93.1% (270/290)  IGHV1-69*10  97   G......G.................................................A.......C....GTAT...A..C.........  186
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  L  G  I  A  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  A  A  D  K  S  T  T  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 
                    Query_10085  182  AAGTTCCAGGGCAGAGTCACGATGGCCGCGGACAAATCCACGACCACAGCCTACATGGAGCTGAGTAGCCTGAGATCTGAAGACACGGCC  271
V  93.1% (270/290)  IGHV1-69*10  187  .......................TA..................G.....................C..............G.........  276
                                       K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><--------------CDR3-IMGT-------------->                                
                                       V  Y  Y  C  A  T  D  L  L  R  S  R  V  G  V  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_10085  272  GTCTATTACTGTGCGACAGATCTCCTGCGTAGCCGAGTCGGTGTGGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  354
V  93.1% (270/290)  IGHV1-69*10  277  ..G.............G...---------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                  
D  100.0% (5/5)     IGHD2-15*01  18   ----------------------------.....--------------------------------------------------  22
J  97.4% (37/38)    IGHJ4*02     9    ---------------------------------------------....A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_69748

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           304     1e-84
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GACTGTTAAACCCAAA	CAGTGGCTGG	GGGGACGGTTCTACTCTCG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGACTGTTAAACCCAAACAGTGGCTGGGGGGACGGTTCTACTCTCGCTACGGTATGGACGTC	RKRLLNPNSGWGDGSTLATVWTS	242	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	52	24	19	4	1	79.2
FR2-IMGT	53	103	51	48	3	0	94.1
CDR2-IMGT	104	127	24	17	7	0	70.8
FR3-IMGT	128	241	114	105	9	0	92.1
CDR3-IMGT (germline)	242	249	8	8	0	0	100
Total	N/A	N/A	250	224	25	1	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  E  A  T  F  S  S  Y  A   *  R  G  S  A  R  L  Q  G  R  G  W 
                    Query_10086  1    GGTCCCTGAGACTCTCCTGTGAAGGCTCTGAAGCCACCTTTAGTAGCTATGC-ATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  89
V  89.6% (224/250)  IGHV3-23*01  47   .....................C..C.....G.TT.........C........C....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       S  G  S  R  L  L  V  A  M  V  A  L  H  T  T  Q  T  P  *  R  A  D  S  P  F  P  E  T  I  P 
                    Query_10086  90   AGTGGGTCTCGGCTATTAGTCGCAATGGTGGCACTGCATACTACGCAGACTCCGTGAAGGGCCGATTCACCATTTCCAGAGACAATTCCA  179
V  89.6% (224/250)  IGHV3-23*01  137  ..........A.........G.T.G......T.GCA............................G........C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                       *  T  R  C  F  C  T  *  A  A  *  D  P  R  T  R  P  Y  I  T  V  R  K  R  L  L  N  P  N  S 
                    Query_10086  180  TGAACACGGTGTTTCTGCACATGAGCAGCCTGAGACCCGAGGACACGGCCATATATTACTGTGCGAAAGAGACTGTTAAACCCAAACAGT  269
V  89.6% (224/250)  IGHV3-23*01  227  A.......C...A......A....A..........G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD6-19*01  9    --------------------------------------------------------------------------------------....  12

                                      --CDR3-IMGT----------------------------->                             
                                       G  W  G  D  G  S  T  L  A  T  V  W  T  S  G  A  K  G  P  R  S  P  S  
                    Query_10086  270  GGCTGGGGGGACGGTTCTACTCTCGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTC  339
D  100.0% (10/10)   IGHD6-19*01  13   ......----------------------------------------------------------------  18
J  97.8% (44/45)    IGHJ6*02     14   -------------------------.....................................A.......  58


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_240587

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            350     9e-99
IGHD2-8*02                                                                                            21.8    0.044
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAA	AGTCACGGGGGGG	AGGATATGGTACTG	ATAATAAGTACTAGTC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAAGTCACGGGGGGGAGGATATGGTACTGATAATAAGTACTAGTCACTTCTACTACGGTCTGGACGTC	AKSHGGEDMVLIISTSHFYYGLDV	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  D  F  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10087  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAGTGATTTTGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  95.2% (236/248)  IGHV3-9*01   47   .....................C...................GA.....A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10087  91   AGTGGGTCTCAAGTATTAGTTGGAATAGTGGCAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (236/248)  IGHV3-9*01   137  ...........G...................T..........................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  L  Y  Y  C  A  K  S  H  G  G  E  D  M  
                    Query_10087  181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGCGAGTTGACGACACGGCCTTGTACTATTGTGCAAAAAGTCACGGGGGGGAGGATATGG  270
V  95.2% (236/248)  IGHV3-9*01   227  ..........G.....................A...C...G..............T..C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD2-8*02   1    ---------------------------------------------------------------------------------.......T.  9

                                      ----CDR3-IMGT------------------------------>                              
                                      V  L  I  I  S  T  S  H  F  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_10087  271  TACTGATAATAAGTACTAGTCACTTCTACTACGGTCTGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTCC  344
D  92.9% (13/14)    IGHD2-8*02   10   .....---------------------------------------------------------------------  14
J  94.3% (50/53)    IGHJ6*02     7    ---------------------...A..........A................A.....................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_142940

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           377     9e-107
IGHD3-3*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTAAA	ACGATTTTTGGAGTGGTTAT	CCATTTGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTAAAACGATTTTTGGAGTGGTTATCCATTTGGGCTACTTTGACTAC	AKVKTIFGVVIHLGYFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	245	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10088  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (245/249)  IGHV3-23*01  47   .....................C....................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  D  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10088  91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGATAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  98.4% (245/249)  IGHV3-23*01  137  ..............................G...........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  V  K  T  I  F  G  V  
                    Query_10088  181  AGAACACCCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTTAAAACGATTTTTGGAGTGG  270
V  98.4% (245/249)  IGHV3-23*01  227  .......G....A........................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (20/20)   IGHD3-3*01   6    --------------------------------------------------------------------------................  21

                                      IMGT--------------------->                                  
                                      V  I  H  L  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10088  271  TTATCCATTTGGGCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (20/20)   IGHD3-3*01   22   ....--------------------------------------------------------  25
J  100.0% (47/47)   IGHJ4*02     2    -------------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_240583

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	276	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_10089  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  96.5% (276/286)  IGHV5-51*01  6    ..................................................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_10089  91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  96.5% (276/286)  IGHV5-51*01  96   ......................A.......G.............G..........................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_10089  181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAGCACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  96.5% (276/286)  IGHV5-51*01  186  ....................C...................A...........................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10089  271  CGTGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.5% (276/286)  IGHV5-51*01  276  .A..............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_130544

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           297     7e-83
IGHD3-9*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGACCCA	TACGGTATTTTG	GCTATTGAGAAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGTGACCCATACGGTATTTTGGCTATTGAGAAG	ATGDPYGILAIEK	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	42	9	0	82.4
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  N  Y  W  S  W  I  R  Q  S  P  A  K  G 
                    Query_10090  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGCCAACTACTGGAGTTGGATCCGCCAATCCCCTGCAAAGGGC  90
V  88.0% (220/250)  IGHV4-31*03  49   .................................................GTT..........C...........GCA...A.GG......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  T  T  E  Y  N  P  S  L  K  S  R  L  T  M  S  I  D  P  S 
                    Query_10090  91   CTCGAGTGGATTGGATACATCTATTATGGTGGGACCACCGAGTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCCATTGACCCGTCT  180
V  88.0% (220/250)  IGHV4-31*03  139  ..G...........G...........CA......G....T.C...........C............G.T.....A..AG.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       T  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  D  P  Y  G  I  L 
                    Query_10090  181  ACGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGTGACCCATACGGTATTTTG  270
V  88.0% (220/250)  IGHV4-31*03  229  .A...................C...G...........................G.............G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD3-9*01   5    ------------------------------------------------------------------------------....A.......  16

                                      ----------->                                
                                       A  I  E  K  W  G  Q  G  T  L  V  T  V  S  S
                    Query_10090  271  GCTATTGAGAAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
J  100.0% (32/32)   IGHJ4*02     15   ------------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_219575

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           396     2e-112
IGHD6-6*01                                                                                            14.1    9.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTC	ATTREQLVPIFDF	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	72	2	0	97.3
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	106	8	0	93
CDR3-IMGT (germline)	291	294	4	4	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  L  T  
                    Query_10091  4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGCAAGGGCTCTGGATATAGCTTAACCA  93
V  93.5% (272/291)  IGHV5-51*01  2    ................................................................T.....T........C.....T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  V  P  G  K  G  L  E  W  I  G  I  I  Y  P  A  D  S  E  T  K  Y  
                    Query_10091  94   GTTATTGGATCGCCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATTGGGATCATCTATCCTGCTGACTCTGAAACCAAATACA  183
V  93.5% (272/291)  IGHV5-51*01  92   .C..C.......G.............A.........................G................G.........T....G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  S  S  S  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_10091  184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCGGCCGACAAGTCCAGCAGCTCCGCCTTCTTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  93.5% (272/291)  IGHV5-51*01  182  ...............................A.............T....A......A.C..............................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  A  I  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10091  274  CCGCCATATATTATTGTGCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTCTGGGGGCAGGGAACCCTGGTCACCGTCTCCTCAG  363
V  93.5% (272/291)  IGHV5-51*01  272  .......G.....C.......---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -----------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------.......A......C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_322810

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           357     1e-100
IGHD6-13*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TA	ATAGCAGC	CCAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAATAGCAGCCCAGACTACGGTATGGACGTC	ARDNSSPDYGMDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_10092  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-11*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  T  A  S  G  N  S  I  F  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10092  91   AGTGGGTTTCATACATTACTGCTAGTGGAAATAGTATATTTTACACAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  95.6% (239/250)  IGHV3-11*01  137  ..................G.AG......T.G..CC....AC...G.............................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  N  S  S  P  D  Y  
                    Query_10092  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAGAGATAATAGCAGCCCAGACTACG  270
V  95.6% (239/250)  IGHV3-11*01  227  ....................................................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-13*01  5    ------------------------------------------------------------------------........----------  12
J  100.0% (50/50)   IGHJ6*02     13   ------------------------------------------------------------------------------------......  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10092  271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (50/50)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_187566

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           329     3e-92
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCTCGTTTATG	ATGGTTCGGGGAGT	CCTCCCGAAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTCGTTTATGATGGTTCGGGGAGTCCTCCCGAAGGACTAC	ARLSFMMVRGVLPKDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  S  G  G  S  V  N  S  G  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_10093  4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCGTCAACAGTGGTGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  92.3% (229/248)  IGHV4-61*08  50   .....TCC...A.....A.....................G...........A......................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  T  G  G  A  N  Y  N  P  S  L  K  S  R  V  S  I  S  I  D  T  S  
                    Query_10093  94   TCGAGTGGATTGGATATATCTATTACACTGGGGGCGCCAACTACAATCCCTCCCTCAAGAGTCGAGTCAGCATATCAATAGACACGTCCG  183
V  92.3% (229/248)  IGHV4-61*08  140  .G...........G.............G....A..A..........C......................C.......G...........A  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      E  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  S  F  M  M  V  R  
                    Query_10093  184  AGAACCAGTTCTCCCTGAAGCTGAGTTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGCGAGACTCTCGTTTATGATGGTTCGGG  273
V  92.3% (229/248)  IGHV4-61*08  230  .........................C..........................G..T............----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD3-10*01  9    --------------------------------------------------------------------------------..........  18

                                      T------------------>                                  
                                      G  V  L  P  K  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10093  274  GAGTCCTCCCGAAGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (14/14)   IGHD3-10*01  19   ....--------------------------------------------------  22
J  100.0% (40/40)   IGHJ4*02     9    --------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_346426

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     4e-95
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGCCCT	TATAGCAGCA	CCGGGGGGAGAGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCGCCCTTATAGCAGCACCGGGGGGAGAGGGTGGTTCGACCCC	ARDRPYSSTGGRGWFDP	232	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	11	0	0	100
CDR1-IMGT	19	42	24	24	0	0	100
FR2-IMGT	43	93	51	49	2	0	96.1
CDR2-IMGT	94	117	24	21	3	0	87.5
FR3-IMGT	118	231	114	111	3	0	97.4
CDR3-IMGT (germline)	232	239	8	8	0	0	100
Total	N/A	N/A	232	224	8	0	96.6


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  F  M  
                    Query_10094  8    GTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATTCATGA  97
V  96.6% (224/232)  IGHV3-21*01  65   ........................................C...........................................C...T.  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      T  S  S  S  N  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  R  N  S  L  F  L  
                    Query_10094  98   CTAGTAGTAGTAATTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAGGAACTCACTGTTTCTGC  187
V  96.6% (224/232)  IGHV3-21*01  155  G...........G...........................................................A...........A.....  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><--------------------CDR3-IMGT----------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  P  Y  S  S  T  G  G  R  G  W  F  
                    Query_10094  188  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGACCGCCCTTATAGCAGCACCGGGGGGAGAGGGTGGTTCG  277
V  96.6% (224/232)  IGHV3-21*01  245  ..................................G.................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (10/10)   IGHD6-13*01  4    -----------------------------------------------------------..........---------------------  13
J  100.0% (46/46)   IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10094  278  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (46/46)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_187562

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           300     9e-84
IGHD5-12*01                                                                                           14.1    8.7  
IGHJ1*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	CTTAGACTCCCGGGT	TGGCTAC	CATCGC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAAGGACTTAGACTCCCGGGTTGGCTACCATCGCGCTGATTACTTCCACCAC	SKDLDSRVGYHRADYFHH	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  M  F  D  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10095  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCATGTTTGACAACTATGCCATGAGTTGGGTCCGACAGGCTCCAGGGAAGGGGCTGG  90
V  88.4% (221/250)  IGHV3-23*01  47   .....................C..............CC...AG..G............C........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  D  R  G  G  G  F  S  S  Y  Y  A  D  S  V  R  G  R  F  T  A  S  R  D  S  S  
                    Query_10095  91   AGTGGGTCTCAGGTGATAGGGGGGGTGGTTTTAGTTCATACTACGCAGACTCCGTGAGGGGCCGGTTCACCGCCTCAAGAGACAGTTCCA  180
V  88.4% (221/250)  IGHV3-23*01  137  ............C.AT...T..TA.....GG...CA.....................A.............AT...C.......A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  E  T  A  V  Y  Y  C  S  K  D  L  D  S  R  V  G  
                    Query_10095  181  AGAACACACTGTATCTACAAATGAACAGCCTGAGAGCCGAGGAAACGGCCGTTTATTACTGTTCGAAGGACTTAGACTCCCGGGTTGGCT  270
V  88.4% (221/250)  IGHV3-23*01  227  .......G........G..........................C........A.........G....A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD5-12*01  11   -------------------------------------------------------------------------------------.....  15

                                      IMGT--------------------->                                  
                                      Y  H  R  A  D  Y  F  H  H  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_10095  271  ACCATCGCGCTGATTACTTCCACCACTGGGGCCAGGGCACCCTTGTCTCTGTCTCCTCAG  330
D  100.0% (7/7)     IGHD5-12*01  16   ..----------------------------------------------------------  17
J  90.4% (47/52)    IGHJ1*01     1    --------.....A........G....................G...A.C..........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_187563

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           394     7e-112
IGHD2-21*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	ATTTTGGTGG	ATAGAGATAGAGTTCC	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTC	ERGILVDRDRVPYGR	285	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	146	52	48	3	1	92.3
CDR2-IMGT	147	170	24	22	2	0	91.7
FR3-IMGT	171	284	114	106	8	0	93
CDR3-IMGT (germline)	285	291	7	7	0	0	100
Total	N/A	N/A	290	273	16	1	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  Y 
                    Query_10096  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACCGACTAT  91
V  94.1% (273/290)  IGHV1-18*01  7    .............................................................................C......AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><---------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                       G  I  I  W  V  R  Q  A  P  W  T  R  A  *  V  G  G  M  D  Q  R  L  H  W  *  Y  K  K  C  T 
                    Query_10096  92   GGTATCATCTGGGTGCGACAAGCCCCCTGGACAAGGGCTTGAGTGGGTGGGATGGATCAGCGCTTACACTGGTAATACAAAAAATGCACA  181
V  94.1% (273/290)  IGHV1-18*01  97   .......G............G.....-...................A.....................A......C.....CT.......  185
                                       G  I  S  W  V  R  Q  A  P   G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                       K  S  P  G  Q  S  D  H  D  H  R  H  I  H  E  N  S  L  H  G  V  E  E  P  E  I  *  R  H  G 
                    Query_10096  182  AAAAGTCCAGGGCAGAGTGACCATGACCACAGACACATCCACGAGAACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGC  271
V  94.1% (273/290)  IGHV1-18*01  186  G..GC.............C..........................C...............C............................  275
                                        K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                       R  V  L  L  C  E  R  G  I  L  V  D  R  D  R  V  P  Y  G  R  L  G  P  R  D  H  G  H  R  L 
                    Query_10096  272  CGTGTATTACTGTGCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  361
V  94.1% (273/290)  IGHV1-18*01  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  90.0% (9/10)     IGHD2-21*01  6    ------------------------...G......--------------------------------------------------------  15
J  100.0% (44/44)   IGHJ6*02     19   --------------------------------------------------........................................  58

                                          
                                       L  
                    Query_10096  362  CTCA  365
J  100.0% (44/44)   IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_187560

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           23.8    0.011
IGHJ2*01                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAT	TATTTCCATGATAGTCGTGGT	G	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCATTATTTCCATGATAGTCGTGGTGACTGGTACTTCGATCTC	ARDHYFHDSRGDWYFDL	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  H  D  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10097  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTCACGACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-53*01  47   ............................................AG.A..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  H  R  D  G  K  T  D  Y  A  V  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_10097  91   AGTGGGTCTCAGTTATTCATAGGGATGGAAAAACAGACTATGCAGTCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.9% (232/247)  IGHV3-53*01  137  .................T....C.G...T.GC...T....C....A............................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------------CDR3-IMGT-
                                      N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  H  Y  F  H  D  S  R  
                    Query_10097  181  ACACTGTGTATCTTCAAATGAACAGCCTGCGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGACCATTATTTCCATGATAGTCGTG  270
V  93.9% (232/247)  IGHV3-53*01  227  ....GC.......................A.....................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  85.7% (18/21)    IGHD3-22*01  2    -----------------------------------------------------------------------....A.T........A...  20

                                      ------------------->                                  
                                      G  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10097  271  GTGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  85.7% (18/21)    IGHD3-22*01  21   ..----------------------------------------------------  22
J  100.0% (51/51)   IGHJ2*01     3    ---...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_187561

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           311     4e-87
IGHD3-10*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GATATATGGGG	TCGGGAAGTTATTAT	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGATATATGGGGTCGGGAAGTTATTATCTTGACTTC	ARGYMGSGSYYLDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	42	9	0	82.4
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	224	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  R  R  Y  W  I  H  W  V  R  Q  T  P  E  N  G  L  
                    Query_10098  1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTCAGAAGGTACTGGATTCACTGGGTCCGCCAAACTCCAGAGAATGGCCTGG  90
V  90.0% (224/249)  IGHV3-74*01  47   ........................C..................T..C........G...............G......G...G..G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  P  Y  I  I  S  D  G  S  K  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  G  
                    Query_10098  91   CGTGGGTCCCATATATTATTAGTGACGGGAGTAAGACAACCTATGCGGACTCCGTTAAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  90.0% (224/249)  IGHV3-74*01  137  T.......T..CG.....A......T.......GC....G...C...........G...............................C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  V  Y  L  Q  M  N  N  L  R  A  E  D  T  A  I  Y  Y  C  A  R  G  Y  M  G  S  G  S  
                    Query_10098  181  AGAACACGGTGTATCTGCAAATGAACAATCTGAGAGCCGAGGACACGGCTATATATTATTGTGCAAGAGGATATATGGGGTCGGGAAGTT  270
V  90.0% (224/249)  IGHV3-74*01  227  ........C..................G......................G.G.....C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD3-10*01  14   --------------------------------------------------------------------------------.....G....  23

                                      ------------->                                  
                                      Y  Y  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10098  271  ATTATCTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  93.3% (14/15)    IGHD3-10*01  24   .....-------------------------------------------  28
J  97.6% (41/42)    IGHJ4*02     7    ------......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_103106

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           288     4e-80
IGHD6-13*01                                                                                           21.8    0.039
IGHJ3*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTCGATGCC	ARGAAGTDVGDAFDA	226	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	39	30	11	1	18	36.7
FR2-IMGT	40	90	51	48	3	0	94.1
CDR2-IMGT	91	111	21	20	1	0	95.2
FR3-IMGT	112	225	114	107	7	0	93.9
CDR3-IMGT (germline)	226	232	7	7	0	0	100
Total	N/A	N/A	250	219	13	18	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  L  S  G  G                    F  Y  W  N  W  I  R  Q  H  P  G  Q  G 
                    Query_10099  1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGG------------------TTTCTACTGGAACTGGATCCGCCAGCACCCAGGGCAGGGC  72
V  87.6% (219/250)  IGHV4-31*03  49   .....................G..........CTCCATCAGCAGTGGTGG..A........G......................A.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  R  Y  I  H  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_10099  73   CTGGAGTGGATTCGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCT  162
V  87.6% (219/250)  IGHV4-31*03  139  ............G........T..................A.................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V 
                    Query_10099  163  AAGAACCAATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTA  252
V  87.6% (219/250)  IGHV4-31*03  229  ........G..........A.....GC...............................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD6-13*01  11   ------------------------------------------------------------------------...........-------  21

                                      ----------------->                                  
                                       G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10099  253  GGCGATGCTTTCGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  304
J  95.9% (47/49)    IGHJ3*01     2    ---........T....T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_187568

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           349     2e-98
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCG	TACGGTGGCTAC	ATGAGAC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCGTACGGTGGCTACATGAGACACTTTGACTAC	ARVPYGGYMRHFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  N  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10100  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACCTTCAATAACTATGAGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-48*03  47   ................................T.........G..GT.....A.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  I  S  Y  I  S  S  S  G  R  T  I  D  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_10100  91   AGTATATTTCATACATTAGTAGTAGTGGTAGAACCATAGACTACGCAGACTCTGTGAGGGGCCGCTTCACCATCTCCAGAGACAACGCCG  180
V  94.8% (236/249)  IGHV3-48*03  137  ...GGG.........................T......T..................A......A........................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  Y  G  G  Y  M  
                    Query_10100  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGTCCCGTACGGTGGCTACATGA  270
V  94.8% (236/249)  IGHV3-48*03  227  .....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD4-17*01  5    --------------------------------------------------------------------------.......A....----  16

                                      ------------->                                  
                                      R  H  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10100  271  GACACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  97.8% (44/45)    IGHJ4*02     4    ---........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_34984

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           355     3e-100
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTT	TTACTATGATAGTAGTGCTTA	CTATGCCTCTTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTTTTACTATGATAGTAGTGCTTACTATGCCTCTTTCTACGTTCTGGACGTC	AREFYYDSSAYYASFYVLDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	239	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  T  V  S  L  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10101  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCACCGTCAGTCTTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  95.2% (239/251)  IGHV4-61*01  49   .................................T.......CAG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  V  Y  F  N  G  N  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_10101  91   CTGGAGTGGATTGGGTATGTCTATTTCAATGGGAACACCAATTACAACCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCC  180
V  95.2% (239/251)  IGHV4-61*01  139  ..................A......A..G.....G......C........................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  F  Y  Y  D  S  S 
                    Query_10101  181  AAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGAGTTTTACTATGATAGTAGT  270
V  95.2% (239/251)  IGHV4-61*01  229  .....................C...............................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.2% (20/21)    IGHD3-22*01  4    --------------------------------------------------------------------------................  19

                                      DR3-IMGT------------------------>                                 
                                       A  Y  Y  A  S  F  Y  V  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10101  271  GCTTACTATGCCTCTTTCTACGTTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  336
D  95.2% (20/21)    IGHD3-22*01  20   .G...-------------------------------------------------------------  24
J  95.9% (47/49)    IGHJ6*02     14   -----------------.....G.A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_34985

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-9*01                                                                                            14.1    8.8  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCGAGGCGGACTTACTC	TATTTTG	CGCAGTTTGTGTCGTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATATCGAGGCGGACTTACTCTATTTTGCGCAGTTTGTGTCGTGCTTTGACTAC	AKDIEADLLYFAQFVSCFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  N  G  L  
                    Query_10102  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTATGCCATGAGCTGGGTCCGCCAGGCGCCAGGGAATGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ...........................................C..C..........................T........G.......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  H  S  G  A  N  T  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  S  
                    Query_10102  91   AGTGGGTCTCAGCTATTAGTCATAGTGGTGCTAACACATATTACGCAGACTCCGTGAAGGGCCGGTTCATCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  ....................GG........G..G......C............................C....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  D  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  I  E  A  D  L  L  
                    Query_10102  181  AGGACACAGTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCCGTCTATTACTGTGCGAAAGATATCGAGGCGGACTTACTCT  270
V  94.0% (235/250)  IGHV3-23*01  227  ..A....GC...............................G...........A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-9*01   10   -----------------------------------------------------------------------------------------.  10

                                      R3-IMGT------------------------>                                  
                                      Y  F  A  Q  F  V  S  C  F  D  Y  W  G  P  G  I  L  V  T  V  S  S  
                    Query_10102  271  ATTTTGCGCAGTTTGTGTCGTGCTTTGACTACTGGGGCCCGGGAATTCTGGTCACCGTCTCCTCAG  336
D  100.0% (7/7)     IGHD3-9*01   11   ......------------------------------------------------------------  16
J  93.2% (41/44)    IGHJ4*02     5    ----------------------.................A.....CC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_34987

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           353     9e-100
IGHD3-10*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	CTAATGGGGAGTT	TTACTTTGGTTCGGG	AAAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGCTAATGGGGAGTTTTACTTTGGTTCGGGAAATTTTGACTAC	AGANGEFYFGSGNFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  E  S  Y  Y  W  S  W  L  R  Q  P  P  G  K  G 
                    Query_10103  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGAAAGTTACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGA  90
V  95.2% (238/250)  IGHV4-61*01  49   .........................................C....GT..................A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  Y  S  G  R  S  N  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S 
                    Query_10103  91   CTGGAGTGGATTGGGTATATCTTTTACAGTGGGAGATCCAACTACAACCCCTCCCTCAACAGTCGTGTCACCATATCAGTAGACACGTCC  180
V  95.2% (238/250)  IGHV4-61*01  139  ......................A............CA......................G.....A........................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  A  N  G  E  F  Y  F 
                    Query_10103  181  AAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCTGACACGGCCGTGTATTACTGTGCGGGAGCTAATGGGGAGTTTTACTTT  270
V  95.2% (238/250)  IGHV4-61*01  229  .....................C...................G........................A...--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  93.3% (14/15)    IGHD3-10*01  4    -----------------------------------------------------------------------------------.....A.  10

                                      GT------------------>                                  
                                       G  S  G  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10103  271  GGTTCGGGAAATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  93.3% (14/15)    IGHD3-10*01  11   ........-----------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     6    ------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_34980

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           358     4e-101
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ2*01                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCAAAGCAGG	TTACTATGATAATAGTGG	CCCAGGTCAAGAG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGCCAAAGCAGGTTACTATGATAATAGTGGCCCAGGTCAAGAGTTCGATCCC	TRAKAGYYDNSGPGQEFDP	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  E  F  T  F  S  H  Y  G  M  H  W  V  R  K  A  P  G  K  G  L  
                    Query_10104  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGAATTCACCTTCAGTCACTATGGCATGCACTGGGTCCGCAAGGCTCCAGGCAAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-33*01  47   ..............................G.............AG......................C.....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10104  91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAAAAGTATGCAGACTCCGTGAAGGGGCGATTCACCATCTCCAGAGACAACTCCG  180
V  96.0% (239/249)  IGHV3-33*01  137  ......................................T.C....................C.......................T...A  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      E  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  A  K  A  G  Y  Y  D  
                    Query_10104  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTACGAGAGCCAAAGCAGGTTACTATGATA  270
V  96.0% (239/249)  IGHV3-33*01  227  ..............................................................G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD3-22*01  4    -------------------------------------------------------------------------------...........  14

                                      -IMGT----------------------->                                  
                                      N  S  G  P  G  Q  E  F  D  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10104  271  ATAGTGGCCCAGGTCAAGAGTTCGATCCCTGGGGCCGTGGCACCCTGGTCACTGTCTCTTCAG  333
D  94.4% (17/18)    IGHD3-22*01  15   G......--------------------------------------------------------  21
J  95.3% (41/43)    IGHJ2*01     11   --------------------.......T..............................C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_34983

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TACAATCGCGGCCGACCA	GGCTGGTA	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATACAATCGCGGCCGACCAGGCTGGTAACTACTTCTACGCCATGGACGTC	AKDTIAADQAGNYFYAMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  G  M  S  W  V  R  Q  A  P  G  Q  G  L  
                    Query_10105  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGGAACTATGGCATGAGCTGGGTCCGCCAGGCTCCAGGGCAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   ...........................................C.G.....C............................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  T  G  S  G  T  Y  S  Y  Y  A  D  S  V  M  G  R  F  T  I  S  R  D  N  S  
                    Query_10105  91   AGTGGGTCTCAGGTATTACTGGTAGTGGTACTTATAGTTACTACGCAGACTCCGTGATGGGTCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-23*01  137  ............C.....G..........GG.AGC.CA...................A...C............................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  K  D  T  I  A  A  D  Q  
                    Query_10105  181  AGAACACGTTGTATCTGCAAATGAACAGCCTGAGACCCGAGGACACGGCCTTATATTACTGTGCGAAAGATACAATCGCGGCCGACCAGG  270
V  92.8% (232/250)  IGHV3-23*01  227  ........C..........................G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD6-19*01  13   ----------------------------------------------------------------------------------------..  14

                                      -IMGT----------------------->                                 
                                      A  G  N  Y  F  Y  A  M  D  V  W  G  Q  G  T  T  V  T  A  S  S 
                    Query_10105  271  CTGGTAACTACTTCTACGCCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGCCTCCTCA  332
D  100.0% (8/8)     IGHD6-19*01  15   ......--------------------------------------------------------  20
J  92.9% (52/56)    IGHJ6*02     7    ------......A.....GT..................................T.......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_34988

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           23.8    0.011
IGHJ2*01                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAT	TATTTCCATGATAGTCGTGGT	G	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCATTATTTCCATGATAGTCGTGGTGACTGGTACTTCGATCTC	ARDHYFHDSRGDWYFDL	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  H  D  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10106  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTCACGACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-53*01  47   ............................................AG.A..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  H  R  D  G  K  T  D  Y  A  V  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_10106  91   AGTGGGTCTCAGTTATTCATAGGGATGGAAAAACAGACTATGCAGTCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.9% (232/247)  IGHV3-53*01  137  .................T....C.G...T.GC...T....C....A............................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------------CDR3-IMGT-
                                      N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  H  Y  F  H  D  S  R  
                    Query_10106  181  ACACTGTGTATCTTCAAATGAACAGCCTGCGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGACCATTATTTCCATGATAGTCGTG  270
V  93.9% (232/247)  IGHV3-53*01  227  ....GC.......................A.....................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  85.7% (18/21)    IGHD3-22*01  2    -----------------------------------------------------------------------....A.T........A...  20

                                      ------------------->                                  
                                      G  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10106  271  GTGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  85.7% (18/21)    IGHD3-22*01  21   ..----------------------------------------------------  22
J  100.0% (51/51)   IGHJ2*01     3    ---...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_34989

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD1-26*01                                                                                           14.1    9.5   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGG	TAGTGGG	CAATACAGTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCT	ARGGSGQYSAYFGS	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	67	4	0	94.4
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	106	8	0	93
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  I  S  
                    Query_10107  7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCATCTGGATACAGCTTTATCAGTG  96
V  93.1% (270/290)  IGHV5-51*01  5    ..............................A....................A..............GT................C...CT  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      D  W  I  G  W  V  R  Q  K  P  G  K  G  L  D  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  S  
                    Query_10107  97   ACTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGACTGGATGGGGGTCATTTATCCTGGTGACTCTGAAACCAGATATAGTC  186
V  93.1% (270/290)  IGHV5-51*01  95   ........................T..................G.........A....C.................T........C..C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  T  S  L  K  A  S  D  T  
                    Query_10107  187  CGTCCTTCCAAGGCCAGGTCACCATTTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGACCAGCCTGAAGGCCTCGGACACCG  276
V  93.1% (270/290)  IGHV5-51*01  185  .........................C...................G....................G.......................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                  
                                      A  I  Y  F  C  A  R  G  G  S  G  Q  Y  S  A  Y  F  G  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10107  277  CCATATACTTCTGTGCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  366
V  93.1% (270/290)  IGHV5-51*01  275  ....G..T.A..........----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD1-26*01  5    -------------------------.......----------------------------------------------------------  11
J  93.6% (44/47)    IGHJ4*02     2    -------------------------------------------........A..AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_346423

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           321     7e-90
IGHD2-21*02                                                                                           18.0    0.58 
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAGTCTGGGCCA	GGTGGTGAC	A	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGAGTCTGGGCCAGGTGGTGACATCGACCTC	ARHESGPGGDIDL	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	228	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  A  H  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_10108  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTGCTCACTACTGGGGCTGGATCCGCCAGCCCCCCGGGAAGGGG  90
V  90.8% (228/251)  IGHV4-39*01  49   ................................................AG.T............................A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  I  I  Y  H  N  T  S  L  K  S  R  V  A  M  S  V  D  T  S 
                    Query_10108  91   CTGGAGTGGATTGGCAGTATATATTATAGTGGGATCATCTACCACAACACGTCCCTCAAGAGTCGAGTCGCCATGTCTGTTGACACGTCC  180
V  90.8% (228/251)  IGHV4-39*01  139  ..............G.....C.............G..C....T.....C....................A....A..C..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  L  L  S  L  N  L  D  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  H  E  S  G  P  G  G 
                    Query_10108  181  AAGAACTTGCTCTCCCTGAACCTGGACTCTGTGACCGCCGCAGACACGGCTCTATATTATTGTGCGAGACATGAGTCTGGGCCAGGTGGT  270
V  90.8% (228/251)  IGHV4-39*01  229  ......CA.T..........G...AG.........................G.G.....C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD2-21*02  11   ------------------------------------------------------------------------------------......  16

                                      ----------->                                  
                                       D  I  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10108  271  GACATCGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (9/9)     IGHD2-21*02  17   ...-------------------------------------------  19
J  97.6% (41/42)    IGHJ5*02     10   ----......C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_66955

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           288     5e-80
IGHD2-2*01                                                                                            18.0    0.60 
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGACAG	ATTGTCGTAGTCCCCGGTGCT	TCCA	ACGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGACAGATTGTCGTAGTCCCCGGTGCTTCCAACGGCATGGACGTC	ARDRQIVVVPGASNGMDV	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	214	30	0	87.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  N  V  S  G  G  S  S  S  S  Y  F  W  T  W  I  R  Q  P  P  G  Q  G  L  E  
                    Query_10109  4    CCCTGAGACTCTCCTGTAATGTCTCTGGTGGCTCCAGCAGTAGTTACTTCTGGACTTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAGT  93
V  87.7% (214/244)  IGHV4-59*01  50   .....TCC...A....C.C.................T...........A.....GC.................A...A............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      *  I  G  Y  V  D  G  S  G  S  P  R  Y  N  P  S  L  K  S  R  V  T  M  S  L  D  T  S  K  N  
                    Query_10109  94   AGATTGGCTATGTCGATGGCAGTGGGAGTCCCAGGTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCGCTAGACACGTCCAAGAACC  183
V  87.7% (214/244)  IGHV4-59*01  140  G......G...A..T..TA.........CA...AC................................A..AG..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      R  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  Q  I  V  V  V  P  G  
                    Query_10109  184  GATTCTCCCTGAGGCTGAATTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGACAGATTGTCGTAGTCCCCGGTG  273
V  87.7% (214/244)  IGHV4-59*01  230  AG..........A.....GC............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  81.0% (17/21)    IGHD2-2*01   6    -----------------------------------------------------------------------.....A.....A..A.C..  24

                                      ------------------->                                 
                                      A  S  N  G  M  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_10109  274  CTTCCAACGGCATGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  326
D  81.0% (17/21)    IGHD2-2*01   25   ..---------------------------------------------------  26
J  95.7% (45/47)    IGHJ6*02     16   ------....T........................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_96928

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           329     3e-92
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_10110  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  N  Y  T  P  S  L  K  P  R  V  T  I  S  L  D  T  S  K  N 
                    Query_10110  91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACACCCCCTCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*08  139  ...A....G......T.......T................A.............AG............A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G 
                    Query_10110  181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGT  270
V  93.0% (227/244)  IGHV4-59*08  229  .............A......C..........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_10110  271  TATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  334
J  94.2% (49/52)    IGHJ1*01     1    ------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_96929

Length=317
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           316     2e-88
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	N/A	TCCTTGCCCCCGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCCTTGCCCCCGAACTAC	ASLPPNY	238	258	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	19	5	0	79.2
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	20	4	0	83.3
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	228	215	13	0	94.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  S  F  T  T  H  T  M  K  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  S  I 
                    Query_10111  13   TGTGCAGCCTCTGGATTCAGCTTCACTACCCATACCATGAAGTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGGAGTGGGTCGCATCCATT  102
V  94.3% (215/228)  IGHV3-21*01  64   ...................C.....G..G.T...G......C.................A.....................T........  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       T  S  S  S  T  Y  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_10111  103  ACTAGTAGTAGTACCTACACATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTG  192
V  94.3% (215/228)  IGHV3-21*01  154  .G...........GT....T......................................................................  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-----CDR3-IMGT----->                        
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  L  P  P  N  Y  W  G  Q  G  T  L  V  T 
                    Query_10111  193  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGTCCTTGCCCCCGAACTACTGGGGCCAGGGAACCCTGGTCACC  282
V  94.3% (215/228)  IGHV3-21*01  244  ...................................G............------------------------------------------  291
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
J  100.0% (39/39)   IGHJ4*02     10   -------------------------------------------------------------.............................  38

                                                
                                       V  S  S  
                    Query_10111  283  GTCTCCTCAG  292
J  100.0% (39/39)   IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30621390


Query= Query_66951

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           330     1e-92
IGHD1-26*01                                                                                           12.2    35   
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TA	GAGCTA	ATCGGGGGCAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAGAGCTAATCGGGGGCAGTTTGACTAC	ASRANRGQFDY	290	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	289	120	99	15	6	82.5
CDR3-IMGT (germline)	290	294	5	5	0	0	100
Total	N/A	N/A	293	254	33	6	86.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  V  K  V  S  C  K  A  V  G  K  N  F  F  S  Y 
                    Query_10112  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGACTCAGTGAAGGTCTCCTGCAAGGCTGTTGGTAAAAACTTTTTCAGTTAT  91
V  86.7% (254/293)  IGHV1-18*01  7    ........................................C.........................TC....T.C.C....AC...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  I  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  S  I  N  A  Y  D  S  K  T  H  Y  A  Q 
                    Query_10112  92   GGTATCATCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCGTCGATCAACGCGTACGATAGTAAGACACACTATGCACAG  181
V  86.7% (254/293)  IGHV1-18*01  97   .......G.........................................GA.G.....G...T...A..G....C...A...........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      --------------------------------------------FR3-IMGT--------------------------------------
                                       K  F  L  G  R  V  S  L  S  T  D  T  D  L  S  T  S  T  P  Y  M  E  V  R  G  L  T  Y  D  D 
                    Query_10112  182  AAGTTCCTGGGCAGAGTCTCCTTGAGCACAGATACAGATCTCTCCACGAGCACGCCCTATATGGAGGTGAGGGGCCTGACATATGACGAC  271
V  86.7% (254/293)  IGHV1-18*01  187  ...C...A..........A..A...C......C...------...........AG....C......C.....A......G..C.......  270
                                       K  L  Q  G  R  V  T  M  T  T  D  T        S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------CDR3-IMGT----------->                                  
                                       T  A  V  Y  Y  C  A  S  R  A  N  R  G  Q  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_10112  272  ACGGCCGTCTATTACTGTGCGAGTAGAGCTAATCGGGGGCAGTTTGACTACTGGGGCCAGGGAACCCTGGTCAGCGTCTCCTCAG  356
V  86.7% (254/293)  IGHV1-18*01  271  ........G..............--------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                 
D  100.0% (6/6)     IGHD1-26*01  11   -------------------------......------------------------------------------------------  16
J  97.7% (42/43)    IGHJ4*02     6    ------------------------------------------...............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_66952

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           363     2e-102
IGHD6-13*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	23	1	0	95.8
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	18	3	0	85.7
FR3-IMGT	147	260	114	104	10	0	91.2
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	250	18	0	93.3


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  
                    Query_10113  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGC  90
V  93.3% (250/268)  IGHV4-59*08  26   ................T.................................................G.......................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  A  L  E  W  I  G  S  I  F  Y  T  G  T  T  N  Y  D  P  S  L  K  S  R  V  T  
                    Query_10113  91   AGCCCCCAGGGAAGGCACTGGAGTGGATCGGGTCTATCTTTTACACTGGGACCACCAACTACGACCCCTCTCTCAAGAGTCGAGTCACCA  180
V  93.3% (250/268)  IGHV4-59*08  116  ...............G............T....A.....A.....G.....G..........A.......C...................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  R  V  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  
                    Query_10113  181  TTTCAGTGGACACGTCCAAGAACCAGTTCTCCCTGAGAGTGACCTCTCTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATC  270
V  93.3% (250/268)  IGHV4-59*08  206  .A.....A............................AGC...G....G......................G.................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -------CDR3-IMGT--------------->                                  
                                      P  H  R  A  A  A  G  P  F  D  N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_10113  271  CCCATAGAGCAGCAGCTGGCCCCTTTGACAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  336
D  100.0% (12/12)   IGHD6-13*01  7    -------............-----------------------------------------------  18
J  93.2% (41/44)    IGHJ4*02     5    ----------------------.......T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_251802

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD3-22*01                                                                                           16.1    2.3   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACAACA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACATTGACCAC	ARAPPFDYDLDVRGIHNIDH	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	236	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10114  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (236/244)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_10114  91   TGGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAGC  180
V  96.7% (236/244)  IGHV4-59*01  139  ..........A.................G.............................................A.............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D 
                    Query_10114  181  CAGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGAC  270
V  96.7% (236/244)  IGHV4-59*01  229  ..................AG...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-22*01  6    ----------------------------------------------------------------------------........------  13

                                      GT------------------------>                                  
                                       V  R  G  I  H  N  I  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10114  271  GTAAGGGGAATCCACAACATTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  97.6% (41/42)    IGHJ4*02     7    -------------------.....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_96922

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           350     8e-99
IGHD6-13*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGA	GGGTATAG	GAAGGTTG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGAGGGTATAGGAAGGTTGACGGTATGGACGTC	AREGGYRKVDGMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  F  E  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10115  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGATTTGAAATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  94.8% (237/250)  IGHV3-48*03  47   ..............................................T.A........A...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  R  T  R  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10115  91   AGTGGGTTTCATACATTAGTAGTAGTGGCAGAACCAGACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (237/250)  IGHV3-48*03  137  ............................T..T....T.T...................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  D  L  Q  M  S  S  L  R  V  E  D  T  G  V  Y  Y  C  A  R  E  G  G  Y  R  K  V  
                    Query_10115  181  AGAACTCACTGGATCTGCAAATGAGCAGCCTGAGAGTCGAGGACACGGGTGTTTATTACTGCGCGAGAGAGGGAGGGTATAGGAAGGTTG  270
V  94.8% (237/250)  IGHV3-48*03  227  ...........T............A...........C...........C............T........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-13*01  1    --------------------------------------------------------------------------........--------  8

                                      ------------->                                 
                                      D  G  M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_10115  271  ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  317
J  97.9% (46/47)    IGHJ6*02     16   ....................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_96923

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           343     2e-96
IGHD5-18*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD5-18*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGGCCTTCCCG	GGATACAGCTCTGGT	CTAGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGGCCTTCCCGGGATACAGCTCTGGTCTAGGTGCTTTTGATATC	AKGAFPGYSSGLGAFDI	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10116  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCAACTATGCCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-30*18  47   ...........................................T.G.....G...G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  S  F  D  G  S  D  K  Y  F  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_10116  91   AGTGGGTGGCATTTATATCATTTGATGGAAGTGATAAATACTTTGCGGACTCCGTGAAGGGCAGATTCAGCATCTCCAGAGACAATTCCA  180
V  94.0% (234/249)  IGHV3-30*18  137  ...........G.........A..........A.........A...A...............C......C....................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  V  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  A  F  P  G  Y  S  
                    Query_10116  181  AGAATACGGTGTTTCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTTTATTACTGTGCGAAAGGGGCCTTCCCGGGATACAGCT  270
V  94.0% (234/249)  IGHV3-30*18  227  ....C...C...A.......................................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (14/15)    IGHD5-18*01  3    --------------------------------------------------------------------------------..........  12

                                      GT-------------------->                                  
                                      S  G  L  G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10116  271  CTGGTCTAGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  327
D  93.3% (14/15)    IGHD5-18*01  13   A....----------------------------------------------------  17
J  100.0% (47/47)   IGHJ3*02     4    ----------...............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_96920

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCGCCGGGGG	AGCAATGGCTGG	GGAAGGTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCCGCCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTATGGACGCC	VRGRRGSNGWGRYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	22	2	6	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	221	24	6	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  S  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_10117  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGCCCTTCAGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.0% (221/251)  IGHV4-34*01  49   .......................C..T......T.........------....C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  L  D  T  S 
                    Query_10117  91   CTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAATCCGTCCCTCCAGAGTCGAGTCACCATATCACTAGACACGTCC  180
V  88.0% (221/251)  IGHV4-34*01  133  .....G.............T..A....AG.....G............C.........A....................G...........  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  V  A  D  T  A  V  Y  Y  C  V  R  G  R  R  G  S  N  G 
                    Query_10117  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGTCGCGGACACGGCTGTGTATTATTGTGTGAGAGGCCGCCGGGGGAGCAATGGC  270
V  88.0% (221/251)  IGHV4-34*01  223  ....................GC............C..C.....................C....C......-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  R  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  A  S  I  S  S 
                    Query_10117  271  TGGGGAAGGTACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGCCTCCATCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  89.6% (43/48)    IGHJ6*02     15   ------------------.............T................A...T.A..G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_96921

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           341     5e-96
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGTCGTC	ATTACGATTTTTGGAGTGGTT	TTGACGCCACGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGTCGTCATTACGATTTTTGGAGTGGTTTTGACGCCACGTACTACTTTGACTTC	ARGRHYDFWSGFDATYYFDF	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	230	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  A  S  G  G  S  I  S  S  H  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10118  1    ACCCTGTCCCTCACCTGCACTGCCTCTGGTGGCTCCATCAGTAGTCACTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.0% (230/242)  IGHV4-59*08  49   ......................T......................T...A........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  D  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_10118  91   TGGATTGGGTATATCGACTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAGAGC  180
V  95.0% (230/242)  IGHV4-59*08  139  ...............T.T...............A..................................A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       H  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  H  Y  D  F  W  S  G 
                    Query_10118  181  CACTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTTTATTACTGTGCGAGGGGTCGTCATTACGATTTTTGGAGTGGT  270
V  95.0% (230/242)  IGHV4-59*08  229  ..G...........G....G...........................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (21/21)   IGHD3-3*01   3    ----------------------------------------------------------------------....................  22

                                      GT------------------------>                                  
                                       F  D  A  T  Y  Y  F  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10118  271  TTTGACGCCACGTACTACTTTGACTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  331
D  100.0% (21/21)   IGHD3-3*01   23   .------------------------------------------------------------  23
J  95.8% (46/48)    IGHJ4*02     1    -------------............A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_96926

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           327     9e-92
IGHD6-6*01                                                                                            23.8    0.011
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	TC	ATAGCAGCTCGT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACTCATAGCAGCTCGTACTACTATGAGTAC	TTHSSSYYYEY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	102	12	0	89.5
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	231	22	0	91.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  T  W  L  S  W  V  R  Q  D  P  E  K  G  L  
                    Query_10119  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACACCTGGCTGAGCTGGGTCCGCCAGGATCCAGAGAAGGGTCTGG  90
V  91.3% (231/253)  IGHV3-15*01  47   .......T.......................................G.....A..................C.....G......G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      A  W  V  G  R  I  K  S  E  T  H  G  G  T  T  D  Y  P  A  P  V  K  G  R  F  T  V  S  R  D  
                    Query_10119  91   CGTGGGTTGGCCGTATTAAAAGCGAGACTCATGGTGGGACAACAGACTACCCTGCACCCGTGAAAGGCAGATTCACCGTCTCTAGAGATG  180
V  91.3% (231/253)  IGHV3-15*01  137  A......................A.A...G....................G..........................A....A.......  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  D  T  L  Y  L  H  M  N  D  L  K  S  E  D  T  A  V  Y  Y  C  T  T  H  S  S  S  Y  
                    Query_10119  181  ATTCAAAAGACACACTATATCTGCACATGAATGACCTGAAAAGCGAGGACACAGCCGTGTATTACTGCACCACTCATAGCAGCTCGTACT  270
V  91.3% (231/253)  IGHV3-15*01  227  ........A....G..G........A.....CAG........C........................T.....-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (12/12)   IGHD6-6*01   5    ---------------------------------------------------------------------------............---  16
J  91.7% (44/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  Y  E  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_10119  271  ACTATGAGTACTGGGGTCAGGGAACCCGGGTCACCGTCTCCTCAG  315
J  91.7% (44/48)    IGHJ4*02     4    ...T...C........C..........T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_96927

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTGA	TATGGTTCGCGGAGTT	CTTGAGAGGGAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTGATATGGTTCGCGGAGTTCTTGAGAGGGAGGACTAC	ARLDMVRGVLEREDY	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	113	1	0	99.1
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	284	9	0	96.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  
                    Query_10120  3    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGCAAGGGTTCTGGGTACAGCTTTTCCA  92
V  96.9% (284/293)  IGHV5-51*03  2    ....G.....G.....................................................T...........A.........A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  
                    Query_10120  93   CCTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACA  182
V  96.9% (284/293)  IGHV5-51*03  92   G...........G........................................................G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  R  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_10120  183  GCCCGTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  96.9% (284/293)  IGHV5-51*03  182  ............A.............................................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  Y  C  A  R  L  D  M  V  R  G  V  L  E  R  E  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_10120  273  CCGCCATGTATTACTGTGCGAGACTTGATATGGTTCGCGGAGTTCTTGAGAGGGAGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  362
V  96.9% (284/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  93.8% (15/16)    IGHD3-10*01  8    ----------------------------.........G......----------------------------------------------  23
J  100.0% (40/40)   IGHJ4*02     9    --------------------------------------------------------..................................  42

                                            
                                      S  S  
                    Query_10120  363  CCTCAG  368
J  100.0% (40/40)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_96924

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD6-13*01                                                                                           12.2    32   
IGHJ5*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCGCCGACG	GCAGCA	CCACCTTCTTCTTCCCCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCGCCGACGGCAGCACCACCTTCTTCTTCCCCGACTGGTTCGACCCC	ARTADGSTTFFFPDWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  I  S  G  G  S  I  N  K  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10121  1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGGCTCCATCAATAAATACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAG  90
V  94.7% (230/243)  IGHV4-59*01  49   .....................G..................G..GT...........C.............................G...  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  R  S  K  N 
                    Query_10121  91   TGGATAGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACAGGTCCAAGAAC  180
V  94.7% (230/243)  IGHV4-59*01  139  .....T..G...............................................................G......C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  V  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  A  D  G  S  T  T  F  F 
                    Query_10121  181  CAGGTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAACCGCCGACGGCAGCACCACCTTCTTC  270
V  94.7% (230/243)  IGHV4-59*01  229  ...T.........A.................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-13*01  8    -------------------------------------------------------------------------......-----------  13

                                      -------------------->                                  
                                       F  P  D  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10121  271  TTCCCCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ5*02     4    -------................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_96925

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            372     2e-105
IGHJ6*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AGGAGACTTCTAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAAGGAGACTTCTATTACTACTACTACACTTTGGACGTC	AREGDFYYYYYTLDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10122  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  97.6% (244/250)  IGHV3-9*01   47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  D  T  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10122  91   AGTGGGTCTCAGGTATTAGTTGGAACAGTGATACCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (244/250)  IGHV3-9*01   137  .........................T....G..G........................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  R  E  G  D  F  Y  Y  Y  
                    Query_10122  181  AGAACTCCCTGTATCTGCAAATGAATAGTCTGAGACCTGAGGACACGGCCTTGTATTACTGTGCAAGAGAAGGAGACTTCTATTACTACT  270
V  97.6% (244/250)  IGHV3-9*01   227  .........................C.........G..............................A...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
J  94.7% (54/57)    IGHJ6*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---------------->                                 
                                      Y  Y  T  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10122  271  ACTACACTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  94.7% (54/57)    IGHJ6*02     13   .....GG.A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_36166

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           346     2e-97
IGHD2-21*01                                                                                           16.1    2.6  
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TATTTGGGAAGATGGTTA	TGGTGGTAATT	CCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATATTTGGGAAGATGGTTATGGTGGTAATTCCCACTACTTTGACCAC	VRDIWEDGYGGNSHYFDH	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	256	35	0	88


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  S  T  N  Y
                    Query_10123  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGGCACCTCGACAAACTA  90
V  88.0% (256/291)  IGHV1-69*06  6    ..................G...............................................T.............TC.GC.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  T  F  Q  T  G  N  T  A  Q
                    Query_10123  91   CGCCATAAGTTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAATGGATGGGAGGAATCATCCCTACTTTTCAAACAGGAAATACCGCACA  180
V  88.0% (256/291)  IGHV1-69*06  96   T..T..C..C.......................A........G...........G..........TC...GGT....C...CTA......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  M  T  A  D  T  S  T  S  T  A  F  M  E  L  S  S  L  T  S  D  D  T  A
                    Query_10123  181  GAGATTCCAGGGCAGAGTCACGATGACCGCGGACACATCCACGAGTACAGCTTTCATGGAGTTGAGCAGCCTGACATCTGACGACACGGC  270
V  88.0% (256/291)  IGHV1-69*06  186  ..AG....................T..........A.........C.....C.A.......C............G......G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  V  R  D  I  W  E  D  G  Y  G  G  N  S  H  Y  F  D  H  W  G  P  G  T  L  V  T
                    Query_10123  271  CGTGTATTATTGTGTGAGAGATATTTGGGAAGATGGTTATGGTGGTAATTCCCACTACTTTGACCACTGGGGCCCGGGAACCCTAGTCAC  360
V  88.0% (256/291)  IGHV1-69*06  276  .........C....C......---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  90.9% (10/11)    IGHD2-21*01  10   ---------------------------------------.......G...----------------------------------------  20
J  93.5% (43/46)    IGHJ4*02     1    -----------------------------------------------------...........T.........A.........G.....  37

                                               
                                        V  S  S
                    Query_10123  361  CGTCTCCTC  369
J  93.5% (43/46)    IGHJ4*02     38   .........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_36167

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           366     2e-103
IGHD1-20*01                                                                                           14.1    9.3   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGAATACAA	GTATAAC	GGAATAGGG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGAATACAAGTATAACGGAATAGGGATGGACGTC	TRSEYKYNGIGMDV	281	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	166	21	19	2	0	90.5
FR3-IMGT	167	280	114	102	12	0	89.5
CDR3-IMGT (germline)	281	286	6	5	1	0	83.3
Total	N/A	N/A	286	260	26	0	90.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  E  S  R  N
                    Query_10124  1    GCAGCTGGTGCAGTCTGGGGGAGGCCTGATCCAGCCGGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCGGGGTTCACCGAAAGTAGGAA  90
V  90.9% (260/286)  IGHV3-53*01  6    ..........G.......A......T..........T................................T..........TC.....C..  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  T  T  H  Y  A  D  S
                    Query_10124  91   TTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGGAGTGGGTCTCAGTTATTTATAGTGGTGGTACCACACACTACGCAGATTC  180
V  90.9% (260/286)  IGHV3-53*01  96   C.......G...........................G..........................C.......G....T..........C..  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  N  S  M  T  T  L  F  L  Q  M  N  S  L  R  A  E  D  S  A  V
                    Query_10124  181  TGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCATGACCACATTGTTTCTTCAAATGAACAGTTTGAGAGCCGAGGACTCGGCCGT  270
V  90.9% (260/286)  IGHV3-53*01  186  C...........A.........................A..A...GC...A...............CC..............A.......  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><----------------CDR3-IMGT--------------->                                 
                                        Y  Y  C  T  R  S  E  Y  K  Y  N  G  I  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10124  271  GTATTACTGTACGAGATCAGAATACAAGTATAACGGAATAGGGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  355
V  90.9% (260/286)  IGHV3-53*01  276  ..........G.....---------------------------------------------------------------------  291
                                        Y  Y  C  A  R                                                                      
D  100.0% (7/7)     IGHD1-20*01  2    ---------------------------.......---------------------------------------------------  8
J  100.0% (42/42)   IGHJ6*02     21   -------------------------------------------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_130548

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD3-9*01                                                                                            16.1    2.6   
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGAAGGATTCCT	ATATTTTG	GGGAATCGTCATCTC	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGAAGGATTCCTATATTTTGGGGAATCGTCATCTCACGGTATGGACGTC	ARQEGFLYFGESSSHGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  T  F  T  K  Y
                    Query_10125  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGGTCTGGATACACCTTTACCAAATA  90
V  95.5% (278/291)  IGHV5-51*01  6    ....................................C........................A....T..........G........GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  S  P  G  D  S  N  T  R  Y  S  P
                    Query_10125  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGCAAAGGCCTGGAGTGGATGGGAATCATCTCTCCTGGTGACTCTAATACCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ..............................G....................G.......A.............G................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  V  K  A  S  D  S  A
                    Query_10125  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCGTGAAGGCCTCGGACAGCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  ............................................G.........................C...............C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  Q  E  G  F  L  Y  F  G  E  S  S  S  H  G  M  D  V  W  G  Q  G  T  T  V
                    Query_10125  271  CATGTATTACTGTGCGAGACAAGAAGGATTCCTATATTTTGGGGAATCGTCATCTCACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-9*01   9    ---------------------------------........-------------------------------------------------  16
J  100.0% (47/47)   IGHJ6*02     16   --------------------------------------------------------..................................  49

                                                   
                                        T  V  S  S 
                    Query_10125  361  CACCGTCTCCTCA  373
J  100.0% (47/47)   IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_114621

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTTC	GATAGTAGTGGTTATTAC	CAATCCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTTCGATAGTAGTGGTTATTACCAATCCAACTACTACTTTGGCATGGACGTC	ARVFDSSGYYQSNYYFGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  F  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10126  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGCAATTATTTCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-21*01  47   ....................................C......T.GC...AG.....A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  S  G  S  R  F  I  F  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10126  91   AGTGGGTCGCATCCATTAGTAGTGGTAGTCGTTTCATCTTCTACGGAGACTCAGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  92.8% (231/249)  IGHV3-21*01  137  ........T..............A.....A...A...A.A.....C.................................A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  S  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  F  D  S  S  G  Y  
                    Query_10126  181  AGAACTCACTGTCTCTGCAAATGAGTAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGTTTTCGATAGTAGTGGTTATT  270
V  92.8% (231/249)  IGHV3-21*01  227  ............A...........AC...........................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-22*01  11   --------------------------------------------------------------------------................  26

                                      R3-IMGT------------------------>                                 
                                      Y  Q  S  N  Y  Y  F  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10126  271  ACCAATCCAACTACTACTTTGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  100.0% (18/18)   IGHD3-22*01  27   ..---------------------------------------------------------------  28
J  94.6% (53/56)    IGHJ6*02     7    ---------.........AC..T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_36168

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD1-26*01                                                                                           18.0    0.67  
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCCCGGCAGG	GTGGGATCTACT	TG	ACGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTC	ARHGPAGWDLLDAMDV	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	68	3	0	95.8
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	103	11	0	90.4
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	292	272	20	0	93.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  N  F  N  S  
                    Query_10127  6    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGACGATCTCTTGTAAGGGTTCTGGATACAACTTTAACAGTA  95
V  93.2% (272/292)  IGHV5-51*01  5    .....................................C.............A......C...................G.....C...CT  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      N  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  
                    Query_10127  96   ACTGGATCGGATGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACCAGATATAGGC  185
V  93.2% (272/292)  IGHV5-51*01  95   ..........C..................................................T.......................C..C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  H  V  T  I  T  A  D  K  S  T  T  T  A  Y  L  R  W  S  S  R  K  A  S  D  T  
                    Query_10127  186  CGTCCTTCCAAGGCCACGTCACCATTACAGCCGACAAGTCCACCACCACCGCCTACCTGCGGTGGAGCAGCCGGAAGGCCTCGGACACCG  275
V  93.2% (272/292)  IGHV5-51*01  185  ................G........CT...............T..G..............A...........T.................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-------------------CDR3-IMGT------------------>                            
                                      A  T  Y  Y  C  A  R  H  G  P  A  G  W  D  L  L  D  A  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_10127  276  CCACTTATTACTGTGCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCT  365
V  93.2% (272/292)  IGHV5-51*01  275  ...TG.................--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD1-26*01  7    ----------------------------------......G.....--------------------------------------------  18
J  97.9% (46/47)    IGHJ6*02     16   ------------------------------------------------...G......................................  57

                                           
                                      S  S 
                    Query_10127  366  CCTCA  370
J  97.9% (46/47)    IGHJ6*02     58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_91320

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           385     4e-109
IGHD6-13*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGGC	AGCAGCAGCTGG	ATAGGGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGCAGCAGCAGCTGGATAGGGGTTGACTCC	ARDQGSSSWIGVDS	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	22	2	0	91.7
FR2-IMGT	75	125	51	50	1	0	98
CDR2-IMGT	126	146	21	21	0	0	100
FR3-IMGT	147	260	114	109	5	0	95.6
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	257	11	0	95.9


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  S  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  
                    Query_10128  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGTAGTGTCTCTGGTGGCTCCATAAGTAATTACTACTGGAGCTGGATCCGGC  90
V  95.9% (257/268)  IGHV4-59*01  26   ................T.......................C.C..................C....G.......................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  S  S  L  K  S  R  V  T  
                    Query_10128  91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGATATATCTATTACAGTGGGAGCACCAATTACAACTCCTCCCTCAAGAGTCGAGTCACCA  180
V  95.9% (257/268)  IGHV4-59*01  116  ...............................G..........................C......C........................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  R  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  
                    Query_10128  181  TATCAGTAGACACGTCCAGGAACCAGTTCTCCCTGAAGCTGAGTTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGATC  270
V  95.9% (257/268)  IGHV4-59*01  206  ..................A........................C................................C...........--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -------CDR3-IMGT--------------->                                  
                                      Q  G  S  S  S  W  I  G  V  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10128  271  AGGGCAGCAGCAGCTGGATAGGGGTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  100.0% (12/12)   IGHD6-13*01  7    -----............-------------------------------------------------  18
J  97.6% (41/42)    IGHJ4*02     7    ------------------------......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_50574

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           297     7e-83
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	217	27	0	88.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q  
                    Query_10129  4    CCCTGAGACTCTCCTGTACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAAT  93
V  88.9% (217/244)  IGHV4-59*01  50   .....TCC...A....C..T..........................C........C............C.................G.G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N  
                    Query_10129  94   GGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAACC  183
V  88.9% (217/244)  IGHV4-59*01  140  ..A....G.....C...T....T....G......C..............C...........C.C.........A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E  
                    Query_10129  184  AGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAGG  273
V  88.9% (217/244)  IGHV4-59*01  230  ..T.........AG..G.G.............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (12/12)   IGHD4-17*01  1    ----------------------------------------------------------------------------............--  12

                                      ------------->                                  
                                      D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10129  274  ATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  321
J  92.5% (37/40)    IGHJ4*02     9    --------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_322815

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           391     6e-111
IGHD3-3*01                                                                                            23.8    0.012 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCCCTCTTCCCCTATA	TTTTGGAGCGGTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCCCTCTTCCCCTATATTTTGGAGCGGTTATTACTTTGACTAC	ARGPSSPIFWSGYYFDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  G  K  K  P  R  A  S  V  K  V  S  C  K  A  S  G  G  T  F  D  S  Y
                    Query_10130  1    GCAGCTGGTGCAGTCTGGAGCTGAGGGGAAGAAGCCTAGGGCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGCGGCACCTTCGACAGTTA  90
V  93.1% (270/290)  IGHV1-69*01  6    ..................G.......T..........G..T...............................A.........AG...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  F  S  W  E  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  T  P  V  F  G  T  T  N  Y  A  Q
                    Query_10130  91   TGCTTTCAGCTGGGAGCGACAGGCCCCAGGACAAGGGCTTGAGTGGATGGGAGGGATCACCCCTGTCTTTGGAACAACAAACTACGCACA  180
V  93.1% (270/290)  IGHV1-69*01  96   ....A.........T............T...............................T....A.......T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  T  T  D  D  R  A
                    Query_10130  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCAGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGACAACTGACGACAGGGC  270
V  93.1% (270/290)  IGHV1-69*01  186  ..............................G...........................................G.T....G....C...  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  G  P  S  S  P  I  F  W  S  G  Y  Y  F  D  Y  W  G  Q  G  Y  L  V  T  V
                    Query_10130  271  CGTGTATTACTGTGCGAGAGGTCCCTCTTCCCCTATATTTTGGAGCGGTTATTACTTTGACTACTGGGGCCAGGGATACCTGGTCACAGT  360
V  93.1% (270/290)  IGHV1-69*01  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  93.3% (14/15)    IGHD3-3*01   11   -------------------------------------........T......--------------------------------------  25
J  93.5% (43/46)    IGHJ4*02     3    ----------------------------------------------------........................AC.........C..  40

                                              
                                        S  S  
                    Query_10130  361  CTCCTCAG  368
J  93.5% (43/46)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_76553

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           388     5e-110
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACAGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	267	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_10131  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  93.4% (267/286)  IGHV5-51*01  6    ..............................A...................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  Q  G  L  E  L  M  G  L  I  Y  P  G  D  S  D  T  W  Y  S  P
                    Query_10131  91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCAAGGCCTGGAGTTGATGGGGCTCATCTATCCTGGTGACTCTGATACCTGGTACAGTCC  180
V  93.4% (267/286)  IGHV5-51*01  96   ......................A........A............G.......A..........................A.A.....C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  T  S  A  Y  L  Q  W  T  T  L  K  A  S  D  P  A
                    Query_10131  181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCACCTCCGCCTACCTGCAGTGGACCACCCTGAAGGCCTCGGACCCCGC  270
V  93.4% (267/286)  IGHV5-51*01  186  ....................C...................A...G.A..................G..G................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10131  271  CATTTACTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACAGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  353
V  93.4% (267/286)  IGHV5-51*01  276  ...G..T.........-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------.................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_251809

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           402     3e-114
IGHD5-12*01                                                                                           14.1    9.9   
IGHJ3*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTCCGTTTCGTAGAGATGC	CTACAATTAC	CGGACCACC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTCCGTTTCGTAGAGATGCCTACAATTACCGGACCACCGATGCTTTTGATATC	ARDRPFRRDAYNYRTTDAFDI	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	274	17	0	94.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  T  V  S  C  K  A  S  G  G  T  L  S  S  F
                    Query_10132  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGACGGTCTCCTGCAAGGCTTCTGGAGGCACCCTCAGCAGCTT  90
V  94.2% (274/291)  IGHV1-69*01  6    ..................G...............................A............................T.........A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  F  I  P  T  F  G  T  T  N  S  A  Q
                    Query_10132  91   TGTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGTTCATCCCTACCTTTGGCACAACAAACTCCGCACA  180
V  94.2% (274/291)  IGHV1-69*01  96   ..C....................................................A.........T......T...G......A......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  S  A  D  V  S  T  S  T  A  Y  M  V  L  S  S  L  T  S  A  D  T  A
                    Query_10132  181  GAAGTTCCAGGGCAGAGTCACGATTAGTGCGGACGTTTCCACGAGCACAGCCTACATGGTGCTGAGCAGCCTGACATCTGCGGACACGGC  270
V  94.2% (274/291)  IGHV1-69*01  186  ..........................CC.......AA......................A..............G.....A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        V  Y  Y  C  A  R  D  R  P  F  R  R  D  A  Y  N  Y  R  T  T  D  A  F  D  I  W  G  Q  G  T
                    Query_10132  271  CGTGTATTACTGTGCGAGAGATCGTCCGTTTCGTAGAGATGCCTACAATTACCGGACCACCGATGCTTTTGATATCTGGGGCCAAGGGAC  360
V  94.2% (274/291)  IGHV1-69*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  90.0% (9/10)     IGHD5-12*01  14   ------------------------------------------....G.....--------------------------------------  23
J  100.0% (49/49)   IGHJ3*02     2    -------------------------------------------------------------.............................  30

                                                          
                                        M  V  T  V  S  S  
                    Query_10132  361  AATGGTCACCGTCTCTTCAG  380
J  100.0% (49/49)   IGHJ3*02     31   ....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_91329

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            315     5e-88
IGHD6-13*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCATCTACCAACCC	CTGGTAC	TCGGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCATCTACCAACCCCTGGTACTCGGGGCTTTGACTAC	ASHLPTPGTRGFDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  I  S  F  G  S  I  T  S  A  N  W  W  S  W  V  R  Q  P  P  G  R  G  L 
                    Query_10133  1    ACCCTGTCCCTCACCTGCGCTATTTCTTTTGGCTCCATCACCAGTGCTAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAGGGGGCTG  90
V  91.0% (223/245)  IGHV4-4*02   49   .....................G.C...GG...........G....AG...C...............................A.......  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  Y  H  G  G  N  T  H  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  K  S  S 
                    Query_10133  91   GAGTGGATTGGGGAAGTATATCATGGTGGGAACACGCACTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTGGACAAGTCCAGT  180
V  91.0% (223/245)  IGHV4-4*02   139  ...............A.C......A......G...CA...................G....................A..........AG  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  H  L  P  T  P  G  T  R 
                    Query_10133  181  AATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGCCATCTACCAACCCCTGGTACTCGG  270
V  91.0% (223/245)  IGHV4-4*02   229  ..C.............A.................................G..............-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  A  L  V  S  V  S  S  
                    Query_10133  271  GGCTTTGACTACTGGGGCCAGGGAGCCCTGGTCAGCGTCTCCTCAG  316
J  95.5% (42/44)    IGHJ4*02     5    --......................A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_105716

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           341     5e-96
IGHD3-16*01                                                                                           12.2    31   
IGHJ2*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTC	TGCTTA	CCATACTA	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTGCTTACCATACTAGGTACTTCGATCTC	ARSAYHTRYFDL	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  T  V  S  S  N  Y  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_10134  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGGTCACCGTCAGTAGCAACTACATGTACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.7% (231/244)  IGHV3-53*01  47   ................................T.......................AG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  L  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_10134  91   AGTTGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCCTGAAGGGCCGTTTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.7% (231/244)  IGHV3-53*01  137  ...G..............................................G..........A............................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  T  V  S  L  H  M  N  S  L  R  V  G  D  T  A  V  Y  Y  C  A  R  S  A  Y  H  T  R  Y  F  
                    Query_10134  181  ACACGGTGTCTCTTCACATGAACAGCCTGAGAGTCGGGGACACTGCCGTCTATTACTGTGCGAGGTCTGCTTACCATACTAGGTACTTCG  270
V  94.7% (231/244)  IGHV3-53*01  227  .....C...A......A................C..A......G.....G..............--------------------------  290
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  100.0% (6/6)     IGHD3-16*01  28   -------------------------------------------------------------------......-----------------  33
J  95.8% (46/48)    IGHJ2*01     6    ---------------------------------------------------------------------------------.........  14

                                      ---->                                  
                                      D  L  W  G  R  G  P  L  V  T  V  S  S  
                    Query_10134  271  ATCTCTGGGGCCGTGGCCCCCTTGTCACTGTCTCCTCAG  309
J  95.8% (46/48)    IGHJ2*01     15   .................A....G................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_70304

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            367     5e-104
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	CTTTTAAGGGGCACGGAAGCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTTTAAGGGGCACGGAAGCAACTAC	ARAFKGHGSNY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10135  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-7*03   47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  G  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10135  91   AGTGGGTGGCCAACATAAAGCAAGATGGAGGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (242/249)  IGHV3-7*03   137  .............................A............................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  S  S  L  H  L  Q  M  S  G  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  F  K  G  H  G  S  
                    Query_10135  181  AGAGCTCACTGCATCTGCAAATGAGCGGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAGAGCTTTTAAGGGGCACGGAAGCA  270
V  97.2% (242/249)  IGHV3-7*03   227  ...A.......T............A.A.........................G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ---->                                  
                                      N  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10135  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (39/39)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_126615

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            357     1e-100
IGHD4-17*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	N/A	CTACGGTGACTAC	AGT	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACTACGGTGACTACAGTTACGACTATTACGGTATGGACGTC	ARDYGDYSYDYYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  N  N  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10136  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAATAACTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-7*01   47   ....................................C.....G..G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  T  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_10136  91   AGTGGGTGGCCACCATAAAGCAAGATGGAAGTGAGAAGTACTATGTGGACTCTGTGGAGGGCCGCTTCACCATCTCCAGGGACAACGCCA  180
V  95.6% (239/250)  IGHV3-7*01   137  ............A........................A..................A.......A..............A..........  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  G  D  Y  S  Y  
                    Query_10136  181  AGAACTCACTGTATCTCCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGGACTACGGTGACTACAGTTACG  270
V  95.6% (239/250)  IGHV3-7*01   227  ................G..................................................A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD4-17*01  4    ----------------------------------------------------------------------.............-------  16
J  96.5% (55/57)    IGHJ6*02     6    --------------------------------------------------------------------------------------...T  9

                                      T------------------>                                 
                                      D  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10136  271  ACTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.5% (55/57)    IGHJ6*02     10   ....C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_186216

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         319     2e-89
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	CGACCCCAAGGCCAAAGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACCCCAAGGCCAAAGCCTTGACTAC	ARRPQGQSLDY	242	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	28	25	23	2	0	92
CDR1-IMGT	29	52	24	22	2	0	91.7
FR2-IMGT	53	103	51	47	4	0	92.2
CDR2-IMGT	104	127	24	22	2	0	91.7
FR3-IMGT	128	241	114	104	10	0	91.2
CDR3-IMGT (germline)	242	247	6	6	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                        <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                          P  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  A  F  H  W  V  R  Q  A  P  G  K  G  L  E  W
                    Query_10137    4    CCCGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTCAGTAATTATGCTTTCCACTGGGTCCGCCAGGCCCCAGGCAAGGGGCTGGAGTG  93
V  91.8% (224/244)  IGHV3-30-3*01  51   ..T..............C.......................GC......A.G.................T....................  140
                                          L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W

                                        ---------><-------CDR2-IMGT------><----------------------------------------------------FR3
                                          V  A  V  I  S  Y  V  G  G  N  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N
                    Query_10137    94   GGTGGCGGTTATATCATATGTTGGAGGCAATAAAAATTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAA  183
V  91.8% (224/244)  IGHV3-30-3*01  141  ......A.............A....A........T.C..C.C................................................  230
                                          V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N

                                        -IMGT----------------------------------------------------><-----------CDR3-IMGT-----------
                                          T  L  F  L  E  M  N  S  L  R  P  D  D  T  A  V  Y  Y  C  A  R  R  P  Q  G  Q  S  L  D  Y
                    Query_10137    184  CACGCTGTTTCTGGAAATGAACAGCCTGAGACCTGACGACACGGCTGTCTACTACTGTGCGAGACGACCCCAAGGCCAAAGCCTTGACTA  273
V  91.8% (224/244)  IGHV3-30-3*01  231  ........A....C.................G....G...........G..T............--------------------------  294
                                          T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                           
J  97.6% (41/42)    IGHJ4*02       7    -----------------------------------------------------------------------------------.......  13

                                        >                                  
                                          W  G  Q  G  T  L  V  I  V  S  S  
                    Query_10137    274  CTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  308
J  97.6% (41/42)    IGHJ4*02       14   .......................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_126617

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           294     6e-82
IGHD3-10*02                                                                                           21.8    0.039
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	N/A	GTATTAATATGTTC	AAGGCGTAT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGGTATTAATATGTTCAAGGCGTATTTCGACCCC	AGGINMFKAYFDP	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	217	29	0	88.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  V  S  R  N  Y  M  S  W  V  R  L  A  P  G  Q  G  L  
                    Query_10138  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCAGTGTCAGCCGCAACTACATGAGTTGGGTCCGCCTGGCTCCAGGACAGGGGCTGG  90
V  88.2% (217/246)  IGHV3-53*01  47   ....................................CC.....TA.............C..........A.........GA.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  I  Y  V  G  G  W  T  Y  Y  S  E  S  V  K  G  R  F  T  I  S  T  D  D  S  K  
                    Query_10138  91   AGTGGGTCTCGCTCATTTATGTCGGTGGTTGGACATATTACTCAGAGTCCGTGAAGGGCCGATTCACCATCTCCACAGACGATTCCAAGA  180
V  88.2% (217/246)  IGHV3-53*01  137  ..........AG.T......AG.......A.C.....C...G....C............................G....A.........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------CDR3-IMGT-------
                                      N  T  L  Y  L  Q  M  T  G  L  R  D  E  D  T  A  M  Y  Y  C  A  G  G  I  N  M  F  K  A  Y  
                    Query_10138  181  ACACCTTGTATCTTCAAATGACTGGCCTGAGAGACGAGGACACGGCCATGTATTATTGTGCGGGAGGTATTAATATGTTCAAGGCGTATT  270
V  88.2% (217/246)  IGHV3-53*01  227  ....GC...............ACA.........C.............G.......C......A...------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  92.9% (13/14)    IGHD3-10*02  1    ------------------------------------------------------------------......C.......----------  14
J  100.0% (43/43)   IGHJ5*02     9    -----------------------------------------------------------------------------------------.  9

                                      ------->                                  
                                      F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10138  271  TCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (43/43)   IGHJ5*02     10   ..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_267210

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           341     5e-96
IGHD2-2*01                                                                                            18.0    0.59 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCACA	ATTCGCCC	AGTACCGGCTGC	CCCTTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAATTCGCCCAGTACCGGCTGCCCCTTGCTTTGACTAC	ATIRPVPAAPCFDY	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	236	18	0	92.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  F  K  N  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10139  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCTTTCAAAAACGCCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTG  90
V  92.9% (236/254)  IGHV3-15*01  47   .......T...........................A......GT.............G..............................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  E  T  D  E  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_10139  91   AGTGGGTTGGCCGTATTAAAAGTGAAACTGATGAGGGGACAACAGACTATGCAGCACCCGTGAAAGGCAGATTCACCATCTCCAGAGATG  180
V  92.9% (236/254)  IGHV3-15*01  137  ......................CA.........GT..............C..T.............................A.......  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  S  E  D  T  G  V  Y  Y  C  A  T  I  R  P  V  P  
                    Query_10139  181  ATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAAGTGAGGACACAGGCGTGTATTATTGTGCCACAATTCGCCCAGTACCGG  270
V  92.9% (236/254)  IGHV3-15*01  227  ..........................................CC..........C.........C...A.....----------------  300
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  91.7% (11/12)    IGHD2-2*01   14   ----------------------------------------------------------------------------------......A.  21

                                      IMGT--------------->                                  
                                      A  A  P  C  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_10139  271  CTGCCCCTTGCTTTGACTACTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTCAG  324
D  91.7% (11/12)    IGHD2-2*01   22   ....--------------------------------------------------  25
J  97.7% (43/44)    IGHJ4*02     5    ----------.......................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_267217

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           420     7e-120
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	74	0	0	100
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	281	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  
                    Query_10140  3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCA  92
V  95.9% (281/293)  IGHV5-51*03  2    .................................................................................G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  
                    Query_10140  93   GCTACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACA  182
V  95.9% (281/293)  IGHV5-51*03  92   ............G.......................A...................................A....G.....A......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  
                    Query_10140  183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACA  272
V  95.9% (281/293)  IGHV5-51*03  182  .................................................C...........G...............A.....T......  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_10140  273  CCGCCGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  362
V  95.9% (281/293)  IGHV5-51*03  272  .....A.G...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD6-19*01  5    --------------------------............----------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_10140  363  CCTCAG  368
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_126610

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGGG	AGCAATGGCTGG	GGAAGGTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTATGGACGCC	ARGHRGSNGWGRYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	228	17	6	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_10141  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCAGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  90.8% (228/251)  IGHV4-34*01  49   .......................C..T................------....C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  H  R  G  G  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_10141  91   CTGGAATGGATTGGGGAAATCATTCATCGTGGAGGCACCAACTACAACCCGTCCCTCCAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  90.8% (228/251)  IGHV4-34*01  133  .....G................A....A.....A.......................A................................  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  G  S  N  G 
                    Query_10141  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGGGAGCAATGGC  270
V  90.8% (228/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  R  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_10141  271  TGGGGAAGGTACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  93.8% (45/48)    IGHJ6*02     15   ------------------.............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_267215

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           411     5e-117
IGHD2-2*01                                                                                            19.9    0.17  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGGGA	AGTACCAGCT	CCTCAACCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGGAAGTACCAGCTCCTCAACCCTGACTAC	ARGGKYQLLNPDY	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	74	1	0	98.7
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	279	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N 
                    Query_10142  3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACGTTCAAC  92
V  94.6% (279/295)  IGHV1-69*01  1    .......................G...........................................................C....G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  T  V  F  G  T  T  N  Y 
                    Query_10142  93   AACTATGCTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCATCATCACTGTCTTTGGAACAACAAACTAC  182
V  94.6% (279/295)  IGHV1-69*01  91   .G............C............................................G......C..A.......T...G........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  A  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_10142  183  GCACAGAAGTTCCAGGGCAGAGTCACCATTACCGCGGACGAATCGACGAGGACAGCCTACATGGAGCTGAGTAGCCTAAGATCTGAGGAC  272
V  94.6% (279/295)  IGHV1-69*01  181  ..........................G.................C.....C....................C.....G............  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  Y  C  A  R  G  G  K  Y  Q  L  L  N  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_10142  273  ACGGCCGTTTATTACTGTGCGAGAGGCGGGAAGTACCAGCTCCTCAACCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  362
V  94.6% (279/295)  IGHV1-69*01  271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (10/10)   IGHD2-2*01   14   -------------------------------..........-------------------------------------------------  23
J  100.0% (41/41)   IGHJ4*02     8    --------------------------------------------------........................................  47

                                       
                                       
                    Query_10142  363  G  363
J  100.0% (41/41)   IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_267214

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           422     2e-120
IGHD5-12*01                                                                                           16.1    2.6   
IGHJ2*01                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAC	GGATGAGAGA	TGGCTACAATT	TTGTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACGGATGAGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTC	ATRMRDGYNFVDWYFDL	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	295	7	6	1	0	85.7
Total	N/A	N/A	294	282	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  N  F  A  
                    Query_10143  2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAACTTTGCCA  91
V  95.9% (282/294)  IGHV5-51*01  2    ....G.....G..........................................................G...........G....A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_10143  92   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACA  181
V  95.9% (282/294)  IGHV5-51*01  92   G...................................................................................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  H  W  S  S  L  Q  A  S  D  
                    Query_10143  182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCACTGGAGTAGCCTCCAGGCCTCGGACA  271
V  95.9% (282/294)  IGHV5-51*01  182  ................................................................G.....C.....GA............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  M  Y  Y  C  A  T  R  M  R  D  G  Y  N  F  V  D  W  Y  F  D  L  W  G  R  G  T  L  V  
                    Query_10143  272  CCGCCATGTATTACTGTGCGACACGGATGAGAGATGGCTACAATTTTGTCGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCA  361
V  95.9% (282/294)  IGHV5-51*01  272  .....................G..------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  90.9% (10/11)    IGHD5-12*01  11   ----------------------------------.......G...---------------------------------------------  21
J  100.0% (51/51)   IGHJ2*01     3    ---------------------------------------------------.......................................  41

                                                  
                                      T  V  S  S  
                    Query_10143  362  CTGTCTCCTCAG  373
J  100.0% (51/51)   IGHJ2*01     42   ............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_70302

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           353     9e-100
IGHD6-13*01                                                                                           21.8    0.039 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGAG	AGCAGCAGCTG	AA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGAGCAGCAGCTGAATGACTAC	ARDREQQLNDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10144  1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCACCTTCAGTACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-21*01  47   ......................A......................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  V  S  S  I  S  T  S  N  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_10144  91   AGTGCGTCTCGTCCATTAGTACTAGCAATACTTACATTTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACGACGCCA  180
V  95.2% (238/250)  IGHV3-21*01  137  ....G.....A..........G...T.G..G......A.............................................A......  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  E  Q  Q  L  N  
                    Query_10144  181  AGAACTCACTATATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGAGAGCAGCAGCTGAATG  270
V  95.2% (238/250)  IGHV3-21*01  227  ..........G...C.......................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  7    ---------------------------------------------------------------------------...........----  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10144  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (41/41)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_267219

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           343     2e-96
IGHD2-15*01                                                                                           14.1    9.7  
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGAG	GGCG	GGATATT	CCTCTGATGGACGTGAATATATGACCCCGCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGGGCGGGATATTCCTCTGATGGACGTGAATATATGACCCCGCTCTTTGACTTT	TRAGYSSDGREYMTPLFDF	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	64	5	0	92.8
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	287	253	34	0	88.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I  N  Y 
                    Query_10145  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGACGATCTCCTGCCAGGCATCCGGTTACAGTTTTATCAATTAC  91
V  88.2% (253/287)  IGHV1-18*04  7    .................................................A.G........A....T..T.......CC....C..GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  H  K  G  N  T  K  Y  A  Q 
                    Query_10145  92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAGGGCCTCGAGTGGATGGGATGGATCAGCGCGCACAAAGGTAACACAAAATATGCACAG  181
V  88.2% (253/287)  IGHV1-18*04  97   ........C.......................A..G..T.......................TT....T...........C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  Y  L  D  V  T  S  Q  R  S  D  D  T  A 
                    Query_10145  182  AGTTTCCAGGGCAGAGTCACCATGACCACAGACACACTCACGGGCACAGCGTACCTGGACGTGACGAGTCAGCGATCTGACGACACGGCC  271
V  88.2% (253/287)  IGHV1-18*04  187  .AGC................................TC....A.......C...A....GC...G...C.T.A.................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  T  R  A  G  Y  S  S  D  G  R  E  Y  M  T  P  L  F  D  F  W  G  Q  G  T  P  V 
                    Query_10145  272  GTTTATTACTGTACGAGGGCGGGATATTCCTCTGATGGACGTGAATATATGACCCCGCTCTTTGACTTTTGGGGCCAGGGAACCCCGGTC  361
V  88.2% (253/287)  IGHV1-18*04  277  ..G.........G....-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  100.0% (7/7)     IGHD2-15*01  2    ---------------------.......--------------------------------------------------------------  8
J  90.9% (40/44)    IGHJ4*02     5    -----------------------------------------------------------........AC................T....  35

                                                   
                                       S  V  S  S  
                    Query_10145  362  TCCGTCTCCTCAG  374
J  90.9% (40/44)    IGHJ4*02     36   A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_126619

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*03                                                                                           327     8e-92
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GGACG	ATATCAGCACCTGGTA	AG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGGGACGATATCAGCACCTGGTAAGGACTAC	VRGTISAPGKDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10146  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACCTTCAGTACCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-74*03  47   ............................T................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  S  R  V  D  G  D  G  R  I  T  Q  Y  A  D  S  V  K  G  R  F  T  M  S  R  D  N  A  
                    Query_10146  91   CTTGGGTCTCACGTGTGGATGGTGATGGACGTATCACACAGTACGCGGACTCCGTGAAGGGCCGATTCACCATGTCCAGAGACAACGCCA  180
V  92.0% (229/249)  IGHV3-74*03  137  TG............A.TA..A.......GA...G....AC.................................C................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  D  L  N  S  L  R  T  E  D  T  A  V  Y  Y  C  V  R  G  T  I  S  A  P  G  
                    Query_10146  181  AGAACACACTGTATCTGGATTTGAACAGTCTGAGAACCGAGGACACGGCTGTGTATTACTGTGTAAGAGGGACGATATCAGCACCTGGTA  270
V  92.0% (229/249)  IGHV3-74*03  227  .......G.........C.AA..............G...........................C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD6-13*01  5    --------------------------------------------------------------------------...G.....G......  20

                                      ------->                                  
                                      K  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10146  271  AGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (40/40)   IGHJ4*02     9    --........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_126618

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           367     6e-104
IGHD3-10*01                                                                                           14.1    9.4   
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGCC	ACTATGG	GGATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATC	ARSHYGDAYWYLDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	261	26	0	90.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T  S  Y 
                    Query_10147  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATCTTCACCAGTTAT  91
V  90.9% (261/287)  IGHV1-18*01  7    .................................................................T..........C...T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  F  E  W  M  G  W  I  S  P  Y  N  G  N  T  A  Y  A  E 
                    Query_10147  92   GGAATCACTTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAGCCTACGCAGAG  181
V  90.9% (261/287)  IGHV1-18*01  97   ..T....GC...........................C.......................G.................AA...T...C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  F  T  V  A  T  E  T  S  T  N  T  A  F  M  E  L  R  S  L  K  A  D  D  T  A 
                    Query_10147  182  AAGTTCCAGGGCAGATTCACCGTGGCCACAGAGACTTCCACGAACACAGCCTTCATGGAGCTGCGGAGTCTGAAAGCTGACGACACGGCC  271
V  90.9% (261/287)  IGHV1-18*01  187  ...C...........G.....A..A.......C..A.......G........A..........A....C....G.T..............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  S  H  Y  G  D  A  Y  W  Y  L  D  I  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10147  272  GTCTATTACTGTGCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  359
V  90.9% (261/287)  IGHV1-18*01  277  ..G..............-----------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                          
D  100.0% (7/7)     IGHD3-10*01  6    ----------------------.......-----------------------------------------------------------  12
J  96.2% (51/53)    IGHJ2*01     1    -----------------------------------..........T.....C....................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_186219

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           260     1e-71
IGHD3-10*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	GTATTAC	AGTAGCCTTGAGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTATTACAGTAGCCTTGAGGAC	AREYYSSLED	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	20	4	0	83.3
FR2-IMGT	51	101	51	43	8	0	84.3
CDR2-IMGT	102	125	24	16	8	0	66.7
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	232	199	33	0	85.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  I  F  G  D  H  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  T  I  S  F  I  
                    Query_10148  16   GTGCAGCCTCTGGATTCATTTTCGGTGACCACTACATGAGTTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGGAGACAATTTCATTCATCA  105
V  85.8% (199/232)  IGHV3-11*06  65   ..................CC...A.....T..........C...A.............A...............TGGG......A...T.  154
                                         A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  H  T  G  D  Y  T  R  Y  R  D  P  V  R  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_10148  106  GTCACACTGGTGATTACACAAGGTATAGAGACCCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAATTCACTGTATCTGC  195
V  85.8% (199/232)  IGHV3-11*06  155  ..AGT.G.A..AG........AC..CGC....T......A....................................C.............  244
                                      S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------CDR3-IMGT--------->                
                                      Q  M  S  S  L  K  V  E  D  T  A  V  Y  Y  C  A  R  E  Y  Y  S  S  L  E  D  W  G  Q  G  T  
                    Query_10148  196  AAATGAGCAGCCTGAAAGTCGAGGACACGGCTGTCTACTACTGTGCGAGAGAGTATTACAGTAGCCTTGAGGACTGGGGCCAGGGAACCC  285
V  85.8% (199/232)  IGHV3-11*06  245  ......A........G..C...............G..T..............--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (7/7)     IGHD3-10*01  1    ----------------------------------------------------.......-------------------------------  7
J  94.4% (34/36)    IGHJ4*02     13   ------------------------------------------------------------------------..................  30

                                                        
                                      L  V  I  V  S  A  
                    Query_10148  286  TGGTCATCGTCTCCGCAG  303
J  94.4% (34/36)    IGHJ4*02     31   ......C.......T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_186218

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           294     7e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCACCGGTGG	AGCAATGGCTGG	GGAACATACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCACCGGTGGAGCAATGGCTGGGGAACATACTATAATTACGGTATGGACGCC	ARGHRWSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	21	3	6	70
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	220	22	6	88.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  T  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_10149  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGCCCTTCACTGACAGTGGTTATTATTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.7% (220/248)  IGHV4-34*12  49   .......................C..T......T......------.......C..C....G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  I  D  T  S 
                    Query_10149  91   CTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAACCCGTCCCTCCAGAGTCGAGTCACCATATCAATAGACACGTCC  180
V  88.7% (220/248)  IGHV4-34*12  133  .....G.............T.......AG.....G......................A....................G...........  222
                                       L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  G  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  W  S  N  G 
                    Query_10149  181  AAGAACCAGTTCTCCCTGAAATTGGGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGGGGCCACCGGTGGAGCAATGGC  270
V  88.7% (220/248)  IGHV4-34*12  223  ....................GC..A.........C........................C........----------------------  290
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_10149  271  TGGGGAACATACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  93.8% (45/48)    IGHJ6*02     15   ------------------.............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_287880

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           374     8e-106
IGHD7-27*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGTCCTTTTA	CTAACTGGGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGTCCTTTTACTAACTGGGGTTGACTTT	AVLLLTGVDF	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	262	23	0	91.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  L  K  I  S  C  Q  G  S  G  Y  T  L  T  N  Y
                    Query_10150  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGCCTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCCTTACCAACTA  90
V  91.9% (262/285)  IGHV5-51*03  6    .........................................AG..................A...............G.T......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  G  W  V  R  Q  R  P  G  E  G  L  E  W  M  G  L  I  Y  P  G  D  S  D  T  K  Y  N  S
                    Query_10150  91   CTTCATCGGCTGGGTGCGCCAGAGGCCCGGGGAAGGCCTGGAGTGGATGGGGCTCATTTATCCTGGTGACTCTGATACCAAGTACAACTC  180
V  91.9% (262/285)  IGHV5-51*03  96   ..GG...................T.......A....................A....C......................GA....G.C.  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  L  S  S  L  K  A  S  D  T  A
                    Query_10150  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCAGACACGTCCATCAGCACCGCCTACTTGCAGTTGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  91.9% (262/285)  IGHV5-51*03  186  ...............G..............C....A...................C......G...........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        I  F  Y  C  A  V  L  L  L  T  G  V  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10150  271  CATCTTTTACTGTGCAGTCCTTTTACTAACTGGGGTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  347
V  91.9% (262/285)  IGHV5-51*03  276  ...G.A.........--------------------------------------------------------------  290
                                        M  Y  Y  C  A                                                              
D  100.0% (10/10)   IGHD7-27*01  1    -------------------------..........------------------------------------------  10
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_132826

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TG	ACGATTTTTGGAGTGG	CCCCGTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACGATTTTTGGAGTGGCCCCGTCCTACTTTGACTCC	ARVTIFGVAPSYFDS	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  H  T  R  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_10151  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCACACTCGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*01  49   ....................................AT..G.A..........................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10151  91   TGGATTGGGTATATCCATTACAGTGGGAGCACCAATTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAT  180
V  95.9% (234/244)  IGHV4-59*01  139  ...............T...................C.....C...............................................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  T  I  F  G  V  A  P  S 
                    Query_10151  181  CAGTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTGACGATTTTTGGAGTGGCCCCGTCC  270
V  95.9% (234/244)  IGHV4-59*01  229  ...............C................................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (16/16)   IGHD3-3*01   6    ------------------------------------------------------------------................--------  21
J  95.7% (45/47)    IGHJ4*02     2    -----------------------------------------------------------------------------------------.  2

                                      ----------->                                  
                                       Y  F  D  S  W  A  Q  G  T  L  V  T  V  S  S  
                    Query_10151  271  TACTTTGACTCCTGGGCCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.7% (45/47)    IGHJ4*02     3    ..........A.....G.............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_132825

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	274	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_10152  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  95.1% (274/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_10152  91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  95.1% (274/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_10152  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  95.1% (274/288)  IGHV5-51*01  186  ...............G.........................T.........................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10152  271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  95.1% (274/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_67608

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           378     3e-107
IGHD6-13*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	GGGTATAGCAGCAGC	GGAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTATAGCAGCAGCGGATTTTGACTAC	ARGGIAAADFDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	243	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10153  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.6% (243/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_10153  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  99.6% (243/244)  IGHV4-59*01  139  ........................................................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  I  A  A  A  D  F  D 
                    Query_10153  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGGGTATAGCAGCAGCGGATTTTGAC  270
V  99.6% (243/244)  IGHV4-59*01  229  ................................................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (15/15)   IGHD6-13*01  1    -----------------------------------------------------------------...............----------  15
J  100.0% (43/43)   IGHJ4*02     6    ------------------------------------------------------------------------------------......  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10153  271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (43/43)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_132823

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           336     1e-94
IGHD1-26*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GGG	GGGAGCTACT	CTCCTTTT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGGGGGGAGCTACTCTCCTTTTTGCTTTTGATATC	VKGGATLLFAFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  M  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10154  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAATATGTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTAG  90
V  93.5% (231/247)  IGHV3-64*05  47   ..........................................G..GC.........................................G.  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  V  S  S  I  T  S  N  A  E  S  T  Y  Y  T  D  S  V  K  D  R  F  T  I  S  R  D  N  S  
                    Query_10154  91   AATCTGTCTCCTCTATTACTAGTAATGCGGAGAGCACATACTACACAGACTCAGTGAAGGACAGATTCACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-64*05  137  ...A...T..AG......G........G..GT............G...............G.............................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  G  G  A  T  L  L  F  
                    Query_10154  181  AGAACACGCTGTATCTTCAAATGAGCAGTCTGAGACCTGAGGACACGGCTGTGTATTACTGTGTGAAGGGGGGAGCTACTCTCCTTTTTG  270
V  93.5% (231/247)  IGHV3-64*05  227  ..............G....................G...............................-----------------------  293
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V                          
D  100.0% (10/10)   IGHD1-26*01  9    ----------------------------------------------------------------------..........----------  18
J  97.9% (46/47)    IGHJ3*02     4    ----------------------------------------------------------------------------------------..  5

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_10154  271  CTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  315
J  97.9% (46/47)    IGHJ3*02     6    ..........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_287885

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           288     4e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACTTTGACTTC	ARVSTSAYYFDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	214	30	0	87.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_10155  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGACAACCCCCAGGAAAGGGACTGGAG  90
V  87.7% (214/244)  IGHV4-59*01  49   .................................T........A.....T.C.........A....G..G........G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  S  F  D  T  S  K  R 
                    Query_10155  91   TGGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGTCCTTTGACACGTCCAAGAGG  180
V  87.7% (214/244)  IGHV4-59*01  139  .......GGT....C...........G.G..C...C................A..G............A..AG.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  Y  Y  F  D 
                    Query_10155  181  CAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATACTACTTTGAC  270
V  87.7% (214/244)  IGHV4-59*01  229  .............A....AGC..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-2*01   17   ---------------------------------------------------------------------......---------------  22
J  91.3% (42/46)    IGHJ4*02     1    -------------------------------------------------------------------------------...........  11

                                      -->                                
                                       F  W  G  R  G  T  L  V  V  V  S  S
                    Query_10155  271  TTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  305
J  91.3% (42/46)    IGHJ4*02     12   .A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_132821

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    116  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_10156  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_10156  91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_10156  181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_10156  271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_132820

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           347     7e-98
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGAGG	TGGGGG	GGGGGATCGGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATGGAGGTGGGGGGGGGGATCGGAATGACTAC	VRDGGGGGDRNDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10157  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-33*01  47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  W  Y  D  G  S  N  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10157  91   AGTGGGTGGCAGCTATATGGTATGATGGAAGTAATAAAAACTATGTAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (236/250)  IGHV3-33*01  137  ............T.........................T......C......C.....................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  K  I  L  Y  L  Q  M  N  S  L  T  D  E  D  T  A  V  Y  Y  C  V  R  D  G  G  G  G  G  D  
                    Query_10157  181  AGAAAATTTTGTATCTGCAAATGAATAGCCTGACAGACGAGGACACGGCTGTGTATTATTGTGTGAGAGATGGAGGTGGGGGGGGGGATC  270
V  94.4% (236/250)  IGHV3-33*01  227  ....C.CGC................C.......G..C.....................C....C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------------......--------  22

                                      ---------->                                  
                                      R  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10157  271  GGAATGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (40/41)    IGHJ4*02     8    ----..................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_67603

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           400     9e-114
IGHD4-17*01                                                                                           18.0    0.67  
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAG	CTACGGTGA	GTCCGAGTAGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTATGGACGTC	ARDLATVSPSSFYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  S  S  Y 
                    Query_10158  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCCTCTGGTTACACCTTTAGTAGTTAT  91
V  94.1% (273/290)  IGHV1-18*01  7    ...............................................................G.T................CC..C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_10158  92   GGTATCACCTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  181
V  94.1% (273/290)  IGHV1-18*01  97   .......G.........A..............A................................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10158  182  ATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.1% (273/290)  IGHV1-18*01  187  .A.C...A..G.................C....................C..........C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  S  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_10158  272  GTGTATTACTGTGCGAGAGATTTAGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACC  361
V  94.1% (273/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------.........--------------------------------------------------------  12
J  100.0% (52/52)   IGHJ6*02     11   -----------------------------------------------...........................................  53

                                               
                                       V  S  S 
                    Query_10158  362  GTCTCCTCA  370
J  100.0% (52/52)   IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_67602

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           346     2e-97
IGHD2-15*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGGCGATTTTGGGTC	CTACTCC	CC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGGCGATTTTGGGTCCTACTCCCCTATGGACGTC	ARVGDFGSYSPMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  I  N  Y  N  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10159  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCATTAACTATAACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-21*01  47   ....................................C.....G..G.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  S  D  S  G  T  Y  I  Y  Y  P  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10159  91   AGTGGGTCTCATTTATTAGTGATAGTGGTACTTACATATACTACCCAGACTCGGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-21*01  137  ............CC......AG....A...G.............G.......A.....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  V  G  D  F  G  S  Y  
                    Query_10159  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCTGTATATTACTGTGCGAGAGTGGGCGATTTTGGGTCCTACT  270
V  94.4% (235/249)  IGHV3-21*01  227  ....................................C...............G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-15*01  25   -------------------------------------------------------------------------------------.....  29

                                      ------------->                                 
                                      S  P  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10159  271  CCCCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
D  100.0% (7/7)     IGHD2-15*01  30   ..---------------------------------------------  31
J  100.0% (43/43)   IGHJ6*02     20   ----...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_67600

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           378     3e-107
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTA	ACGATTT	ACATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACGATTTACATTATGGTATGGACGTC	ARVNDLHYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10160  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATTCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*01  49   ...................C................................................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  L  V  T  I  S  V  D  T  S 
                    Query_10160  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCTAGTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*01  139  ..........................................................A...............................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  D  L  H  Y  G 
                    Query_10160  181  AAGAACCAGCTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTTAACGATTTACATTATGGT  270
V  98.4% (246/250)  IGHV4-31*01  229  .........T............................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   6    -------------------------------------------------------------------------.......----------  12
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10160  271  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  312
J  100.0% (45/45)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_67606

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           297     7e-83
IGHD6-6*01                                                                                            18.0    0.58 
IGHJ5*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD6-6*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGGGTCGGG	GCAGCTCGT	T	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGGGTCGGGGCAGCTCGTTCAACTGGTTCGATTTC	ARGRGSSFNWFDF	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	218	28	0	88.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  K  T  D  Y  Y  W  N  W  I  R  H  H  P  Q  Q  G 
                    Query_10161  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAAGACTGATTACTACTGGAATTGGATCCGCCATCACCCACAGCAGGGC  90
V  88.6% (218/246)  IGHV4-31*01  49   ...............................G...........GTGG..G...........GC...........G......GG.A.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  Y  I  Y  A  T  G  S  T  S  Y  N  P  S  L  K  S  L  I  T  I  S  V  D  T  S 
                    Query_10161  91   CTGGAGTGGCTTGGGTACATCTACGCCACTGGGAGCACCTCCTACAACCCGTCCCTCAAAAGTCTAATTACCATTTCAGTCGACACTTCT  180
V  88.6% (218/246)  IGHV4-31*01  139  .........A.............TTA..G...........A..................G......G.......A.....A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  T  M  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  G  R  G  S  S  F  N 
                    Query_10161  181  AAGAACCAGTTCTCCCTGACGATGACCTCTGTGACTGCCGCGGACACGGCCATCTATTACTGTGCGCGGGGTCGGGGCAGCTCGTTCAAC  270
V  88.6% (218/246)  IGHV4-31*01  229  ...................A.C...G.........................G.G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (9/9)     IGHD6-6*01   8    ----------------------------------------------------------------------------.........-----  16
J  94.0% (47/50)    IGHJ5*01     2    --------------------------------------------------------------------------------------....  5

                                      ----------->                                  
                                       W  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10161  271  TGGTTCGATTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  94.0% (47/50)    IGHJ5*01     6    ........C.C.........A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_67605

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           380     1e-107
IGHD3-22*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCCGTTG	ATTACTATGAAAGTA	CTTGTTCTTCT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGTTGATTACTATGAAAGTACTTGTTCTTCTTAC	ARAVDYYESTCSSY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  R  I  S  C  R  V  S  G  D  M  F  G  S  Y
                    Query_10162  1    GCAGCTGGTGCAGTCTGGAGCAGAGCTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGTTTCTGGAGACATGTTCGGCAGTTA  90
V  92.0% (266/289)  IGHV5-51*01  6    .........................G........................A...........A..G.......T...GC..TAC...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  C  P  G  D  S  D  T  R  Y  S  P
                    Query_10162  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGCAAAGGCCTGGAGTGGATGGGGATCATCTGTCCTGGTGACTCTGATACCAGATACAGCCC  180
V  92.0% (266/289)  IGHV5-51*01  96   ........G.....................G............................A..............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  R  V  T  F  S  V  D  T  S  L  S  T  A  Y  V  Q  W  S  S  L  K  P  S  D  T  A
                    Query_10162  181  GTCATTCCAAGGCCGGGTCACCTTCTCAGTCGACACGTCCCTCAGCACCGCCTACGTGCAGTGGAGCAGCCTGAAGCCCTCGGACACCGC  270
V  92.0% (266/289)  IGHV5-51*01  186  ...C..........A.......A......C.....A....A..............C....................G.............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  A  V  D  Y  Y  E  S  T  C  S  S  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_10162  271  CATATATTACTGTGCGAGAGCCGTTGATTACTATGAAAGTACTTGTTCTTCTTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  359
V  92.0% (266/289)  IGHV5-51*01  276  ...G...............----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  93.3% (14/15)    IGHD3-22*01  3    --------------------------..........T....------------------------------------------------  17
J  97.3% (36/37)    IGHJ4*02     12   ----------------------------------------------------........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_132828

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            339     2e-95
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGGC	GGGGGA	CCTACCGTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGCGGGGGACCTACCGTGTTTGACTAC	ARGGGGPTVFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	25	2	0	92.6
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  A  S  I  S  S  S  K  W  W  T  W  V  R  Q  P  P  G  K  G  
                    Query_10163  1    GGTCCCTGAGACTCTCCTGTGCTGTCTCTGGTGCCTCCATCAGCAGTAGTAAATGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  93.6% (233/249)  IGHV4-4*02   47   ..A.....TCC...A....C.............G..................C.......G.............................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  D  I  Y  H  S  G  S  S  N  Y  S  P  S  L  E  S  R  V  T  I  S  V  D  K  S  
                    Query_10163  91   TGGAGTGGATTGGGGATATCTATCATAGTGGGAGCTCCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCA  180
V  93.6% (233/249)  IGHV4-4*02   137  ................A..................A.........A..........A.................................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  G  P  T  V  
                    Query_10163  181  AGAATCAGTTCTCCCTGAAGCTGACATCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCGGCGGGGGACCTACCGTGT  270
V  93.6% (233/249)  IGHV4-4*02   227  ....C...................GC...........................................---------------------  295
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  18   --------------------------------------------------------------------------......----------  23
J  100.0% (43/43)   IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10163  271  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (43/43)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_23638

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           383     1e-108
IGHD5-18*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	GGATACACCTATGGT	CA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGATACACCTATGGTCATGACTAC	AREGYTYGHDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	268	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  F  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  G  P  F  S  S  Y
                    Query_10164  1    GCAGCTGGTGCAGTCTGGGGCCGAGTTTAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGCAAGGCCTCTGGCGGCCCCTTCAGCAGTTA  90
V  92.1% (268/291)  IGHV1-69*01  6    .....................T...G.G......................A...............T.....A...A..........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  I  R  Q  A  P  G  L  G  L  E  W  M  G  G  I  I  P  I  L  G  P  A  N  Y  A  V
                    Query_10164  91   CGCTATTAGCTGGATTCGACAGGCCCCTGGACTAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCCTTGGTCCAGCAAACTACGCAGT  180
V  92.1% (268/291)  IGHV1-69*01  96   T.....C......G.G................A..................................T.....A..............CA  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  L  E  V  K  S  L  R  S  E  D  T  A
                    Query_10164  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACTTGGAGGTGAAAAGCCTGCGATCTGAGGACACGGC  270
V  92.1% (268/291)  IGHV1-69*01  186  .......................................................A.....C...GC......A................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                
                                        V  Y  Y  C  A  R  E  G  Y  T  Y  G  H  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_10164  271  CGTGTATTATTGTGCGAGAGAAGGATACACCTATGGTCATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  348
V  92.1% (268/291)  IGHV1-69*01  276  .........C...........---------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                            
D  93.3% (14/15)    IGHD5-18*01  3    ----------------------.......G.......-----------------------------------------  17
J  100.0% (39/39)   IGHJ4*02     8    ---------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_23639

Length=414
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            441     6e-126
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	290	358	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	70	5	0	93.3
CDR1-IMGT	77	100	24	24	0	0	100
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	112	2	0	98.2
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	296	289	7	0	97.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_10165  2    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATACACCTTCACC  91
V  97.6% (289/296)  IGHV1-2*04   1    ...G...................G.............AG................................T..................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 
                    Query_10165  92   GGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTAT  181
V  97.6% (289/296)  IGHV1-2*04   91   ..........................................................................................  180
                                       G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  G  S  D  D 
                    Query_10165  182  GCACAGAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGGGATCTGACGAC  271
V  97.6% (289/296)  IGHV1-2*04   181  ..............................................................................A...........  270
                                       A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                      -----------------><-----------------------------CDR3-IMGT----------------------------->   
                                       T  A  V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W 
                    Query_10165  272  ACGGCCGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGG  361
V  97.6% (289/296)  IGHV1-2*04   271  .............A............----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.7% (18/19)    IGHD3-22*01  7    --------------------------------------...........G.......---------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ---------------------------------------------------------------....A......................  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_10165  362  GGCCAAGGGACCACGGTCACCGTCTCCTCA  391
J  98.2% (56/57)    IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40604112


Query= Query_321508

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         338     5e-95
IGHD3-10*01                                                                                           37.2    9e-07
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAA	GTATTACTATGGTTCGGGG	CCCCCGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAGTATTACTATGGTTCGGGGCCCCCGATTGACTCC	ARDKYYYGSGPPIDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10166    1    GGTCCCTGAGACTCTCCTGTGCCGCCTCTGGATTCACCTTCAGTGACTATTCTATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-30-3*01  47   ......................A.....................AG....G....G..................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  E  D  G  N  K  K  Y  Y  A  G  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10166    91   AATGGGTGGCTGTTATATCAGAGGATGGAAACAAAAAATACTACGCAGGCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.2% (233/250)  IGHV3-30-3*01  137  .G........A.........T.T.......G...T.............A.........................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  K  Y  Y  Y  G  S  
                    Query_10166    181  AGAACACCCTGTTTCTCCAAATGAACAGCCTGAGAGCTGAGGACACGGCTATTTATTACTGTGCGAGAGATAAGTATTACTATGGTTCGG  270
V  93.2% (233/250)  IGHV3-30-3*01  227  .......G....A...G.................................G.G.................--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (19/19)   IGHD3-10*01    1    -------------------------------------------------------------------------.................  17

                                        ---------------->                                  
                                        G  P  P  I  D  S  W  G  R  G  T  L  V  I  V  S  S  
                    Query_10166    271  GGCCCCCGATTGACTCCTGGGGCCGGGGAACGCTGGTCATCGTCTCCTCAG  321
D  100.0% (19/19)   IGHD3-10*01    18   ..-------------------------------------------------  19
J  90.5% (38/42)    IGHJ4*02       7    ---------......A........A......C.......C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_321509

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD6-19*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TTCCTCT	TGGCTGG	GACC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATTCCTCTTGGCTGGGACCTGATGCTTTTCAAATC	ARDSSWLGPDAFQI	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  S  I  R  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_10167  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTCCATCAGAAGTTACTACTGGAATTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  91.0% (222/244)  IGHV4-59*01  50   .....TCC...A....C.............G.........T.............GC..................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  M  Y  Y  S  G  T  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  G  D  T  S  K  N  
                    Query_10167  94   GGATTGGGTATATGTATTACAGTGGGACTACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGGAGACACGTCTAAGAACC  183
V  91.0% (222/244)  IGHV4-59*01  140  .............C.............GC.....................A.....................T.........C.......  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  F  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  L  G  P  D  A  
                    Query_10167  184  AATTTTTCCTGACGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGGGATTCCTCTTGGCTGGGACCTGATGCTT  273
V  91.0% (222/244)  IGHV4-59*01  230  .G..C.C.....A.C.....................................C........A..--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (7/7)     IGHD6-19*01  12   -----------------------------------------------------------------------.......------------  18
J  90.0% (45/50)    IGHJ3*02     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  Q  I  W  G  Q  G  T  I  V  T  V  S  S  
                    Query_10167  274  TTCAAATCTGGGGCCAGGGGACAATTGTCACCGTGTCTTCAG  315
J  90.0% (45/50)    IGHJ3*02     9    ..G.T...........A........G........C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_321506

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10168  1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T..........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  R  S  E 
                    Query_10168  91   GAGTGGATTGGGGAGATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCAAGTCTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ..............A....A..A..............A...................AG............A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  M  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_10168  181  AACCAGTTCTCCCTGATGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................A.....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  95.7% (44/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_10168  271  GACGTCTGGGGCCAAGGGGCCACGGTCACCGTCTCCTCA  309
J  95.7% (44/46)    IGHJ6*02     24   ..................A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_321507

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            327     8e-92
IGHD3-16*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCAGCCTGATCGGGACAG	TGCTTAT	N/A	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCAGCCTGATCGGGACAGTGCTTATTAC	ASQPDRDSAYY	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  I  S  G  V  S  F  S  R  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10169  1    ACCCTGTCCCTCACCTGCGCTATATCTGGTGTCTCCTTCAGTAGAAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  92.7% (227/245)  IGHV4-4*02   49   .....................G.C.......G....A....C..T.G.......................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  D  S  G  S  T  N  Y  N  E  S  L  K  S  R  V  I  I  S  I  D  K  S  K 
                    Query_10169  91   GAGTGGATTGGGGAAATCTCTGATAGTGGGAGCACCAACTACAACGAGTCTCTCAAGAGTCGAGTCATCATATCAATAGACAAGTCCAAG  180
V  92.7% (227/245)  IGHV4-4*02   139  ...................A.C.......................CC...C................C.......G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  H  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  Q  P  D  R  D  S  A  Y 
                    Query_10169  181  AACCAATTCTCCCTGCATCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGCCAGCCTGATCGGGACAGTGCTTAT  270
V  92.7% (227/245)  IGHV4-4*02   229  .....G.........A.G...............................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-16*01  28   -----------------------------------------------------------------------------------.......  34

                                      -->                                  
                                       Y  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_10169  271  TACTGGGGCCAGGGAACCCTGGCCACCGTCTCCTCAG  307
J  97.3% (36/37)    IGHJ4*02     12   ......................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_321504

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD4-17*01                                                                                           16.1    2.5   
IGHJ1*01                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD4-17*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGG	ACGGTGAC	GCTCTTTTGCGAGA	TGAAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGACGGTGACGCTCTTTTGCGAGATGAATACTTCCAACAC	ARRDGDALLRDEYFQH	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	70	4	0	94.6
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	102	12	0	89.5
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	294	272	22	0	92.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  A  Y  S  F  T  
                    Query_10170  2    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCTTGTAAAGGTTCTGCATACAGCTTTACCA  91
V  92.5% (272/294)  IGHV5-51*01  2    ....G........G...............................................C.....G.......G..............  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  G  D  S  D  A  R  Y  
                    Query_10170  92   ACTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGCATCATCTTTCCTGGTGACTCTGATGCCAGATACA  181
V  92.5% (272/294)  IGHV5-51*01  92   G...........G..........................................G.......A................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  H  I  T  L  S  A  D  K  S  V  S  T  V  Y  L  Q  W  R  G  L  R  A  P  D  
                    Query_10170  182  GCCCGTCCTTCCAAGGCCACATCACCCTCTCAGCCGACAAGTCCGTCAGCACCGTCTACCTGCAGTGGAGGGGCCTGAGGGCCCCCGACC  271
V  92.5% (272/294)  IGHV5-51*01  182  ...................GG.....A.................A.........C...............CA......A....T.G...A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      P  A  I  Y  Y  C  A  R  R  D  G  D  A  L  L  R  D  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  
                    Query_10170  272  CCGCCATATATTACTGTGCGAGACGGGACGGTGACGCTCTTTTGCGAGATGAATACTTCCAACACTGGGGCCAGGGAACCCTGGTCACCG  361
V  92.5% (272/294)  IGHV5-51*01  272  .......G................------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD4-17*01  6    ---------------------------........-------------------------------------------------------  13
J  96.0% (48/50)    IGHJ1*01     3    -------------------------------------------------............G..............C.............  43

                                               
                                      V  S  S  
                    Query_10170  362  TCTCCTCAG  370
J  96.0% (48/50)    IGHJ1*01     44   .........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_321505

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  H  G  S  I  S  G  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_10171  4    CCCTGAGACTCTCCTGTACTGTCTCTCATGGCTCCATCAGTGGTTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  91.0% (222/244)  IGHV4-59*01  50   .....TCC...A....C.........GG.............A...A......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S  
                    Query_10171  94   GGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCGGTAGACACGTCCAAGAGCC  183
V  91.0% (222/244)  IGHV4-59*01  140  .......G......T..........G.GC.............................A.T......A..A................A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  L  S  S  L  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F  
                    Query_10171  184  AGTTCTCCCTGAAGCTGAGCTCTCTGACCGCTGCGGACGCGGCCGTGTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTTG  273
V  91.0% (222/244)  IGHV4-59*01  230  .......................G..............A.........................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------------------------.......C.G..A..  15

                                      ------------------->                                  
                                      G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10171  274  GTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  83.3% (15/18)    IGHD5-18*01  16   ...---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    -----.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_321503

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           377     1e-106
IGHD3-16*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACAAGCGGGCGGCACC	TTTGGGG	CGAGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTAC	ARGQAGGTFGASDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	265	24	0	91.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  E  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  S  F  N  D  Y 
                    Query_10172  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGGAGCCTGGGGCCTCAATGAAGGTCTCCTGCAAGGCTTCCGGTTACAGCTTTAACGACTAT  91
V  91.7% (265/289)  IGHV1-18*01  7    ..............................A..............G......................T.......C.....C.AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  M  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  A  Y  N  G  N  T  K  Y  S  E 
                    Query_10172  92   GGTATCACTTGGATGCGACAGGCCCCTGGACAGGGGCCTGAGTGGATGGGATGGATCAGCGCATATAATGGTAACACAAAGTATTCAGAG  181
V  91.7% (265/289)  IGHV1-18*01  97   .......GC...G...................A....T........................T..C..............C...G..C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  L  Q  G  R  L  I  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10172  182  AGGCTCCAGGGCAGACTCATCATGACCACAGACACATCCACGAGCACAGCCTACATGGAATTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  91.7% (265/289)  IGHV1-18*01  187  .A.............G...C.......................................GC.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  G  Q  A  G  G  T  F  G  A  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10172  272  GTCTATTATTGTGCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  91.7% (265/289)  IGHV1-18*01  277  ..G.....C..........---------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD3-16*01  15   ------------------------------------.......---------------------------------------------  21
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_321500

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           316     2e-88
IGHD1-7*01                                                                                            16.1    2.2  
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAGGGGCG	GGAACTAC	CGCTA	TGATA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAGAGGGGCGGGAACTACCGCTATGATACTTTTGATATC	VRERGGNYRYDTFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  T  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10173  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTGCCTATACAATTCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.4% (226/250)  IGHV3-64*01  47   .....................................C......AG....G.T..G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  S  I  S  S  N  G  G  S  A  S  Y  G  H  S  V  K  D  R  F  T  I  S  R  D  N  L  
                    Query_10173  91   AATTTGTTTCAAGCATTAGTAGTAATGGGGGTAGTGCATCTTATGGACACTCTGTGAAGGACAGATTCACCATCTCCAGAGACAATTTAA  180
V  90.4% (226/250)  IGHV3-64*01  137  ...A.......GCT....................CA...A.....C.A............G..........................CC.  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  I  F  L  Q  M  G  S  L  R  T  E  D  M  A  V  Y  Y  C  V  R  E  R  G  G  N  Y  R  
                    Query_10173  181  AGAACACGATATTTCTTCAAATGGGCAGCCTGAGAACTGAAGACATGGCTGTGTATTACTGTGTGAGAGAGAGGGGCGGGAACTACCGCT  270
V  90.4% (226/250)  IGHV3-64*01  227  ........C.G.A......................G....G......................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-7*01   10   ------------------------------------------------------------------------------........----  17

                                      ---------------->                                  
                                      Y  D  T  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10173  271  ATGATACTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  98.0% (49/50)    IGHJ3*02     1    -....G.............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_23635

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           327     9e-92
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	AGCT	CGATTTTTGGACTGGTTATT	TTAGGTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAAGCTCGATTTTTGGACTGGTTATTTTAGGTAACTTTGACTAC	AGSSIFGLVILGNFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  A  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_10174  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTAGCAGTGCTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGG  90
V  92.0% (229/249)  IGHV4-39*01  49   .............................T...........C..T...AG.........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  N  T  Y  Y  N  P  S  L  R  S  R  L  H  M  S  V  D  T  S 
                    Query_10174  91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAACACCTACTATAATCCGTCCCTCAGGAGTCGACTCCACATGTCCGTAGACACTTCT  180
V  92.0% (229/249)  IGHV4-39*01  139  ..................................G.........C..C..........A.......G..AC...A...........G..C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  I  F  G  L  V 
                    Query_10174  181  AAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCAGACACGGCTGTTTATTACTGTGCGGGAAGCTCGATTTTTGGACTGGTT  270
V  92.0% (229/249)  IGHV4-39*01  229  ...................A.....G...........................G............A..---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-3*01   7    -------------------------------------------------------------------------...........G.....  23

                                      GT------------------>                                  
                                       I  L  G  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10174  271  ATTTTAGGTAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  325
D  95.0% (19/20)    IGHD3-3*01   24   ...----------------------------------------------------  26
J  97.8% (44/45)    IGHJ4*02     4    ----------..................................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_94789

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           420     7e-120
IGHD1-26*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGACGTCTTTCC	TATAGTG	AAAACTATA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGACGTCTTTCCTATAGTGAAAACTATAACTTTGACTAC	ASRRLSYSENYNFDY	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	73	2	0	97.3
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	294	5	5	0	0	100
Total	N/A	N/A	293	281	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_10175  2    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  91
V  95.9% (281/293)  IGHV1-69*01  1    ...G...................G..................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  V  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  T  F  D  T  A  N  Y 
                    Query_10175  92   GACTATGTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTACCTTTGATACAGCAAACTAC  181
V  95.9% (281/293)  IGHV1-69*01  91   AG.....C..............................................................T.....G.............  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  T  T  A  Y  M  E  R  S  S  L  R  S  V  D 
                    Query_10175  182  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGACCACAGCCTACATGGAGCGGAGCAGCCTGAGATCTGTAGAC  271
V  95.9% (281/293)  IGHV1-69*01  181  .................................................G.................T.................AG...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  S  R  R  L  S  Y  S  E  N  Y  N  F  D  Y  W  G  Q  G  T  L  V  T  V 
                    Query_10175  272  ACGGCCGTATATTACTGTGCGAGCCGACGTCTTTCCTATAGTGAAAACTATAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTC  361
V  95.9% (281/293)  IGHV1-69*01  271  ........G..............-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (7/7)     IGHD1-26*01  3    ------------------------------------.......-----------------------------------------------  9
J  100.0% (45/45)   IGHJ4*02     4    ----------------------------------------------------......................................  41

                                             
                                       S  S  
                    Query_10175  362  TCCTCAG  368
J  100.0% (45/45)   IGHJ4*02     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_320679

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD2-8*02                                                                                            14.1    9.4   
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGT	TACTGGT	ACCAACGCCAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTC	ARLVTGTNATYGLDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_10176  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAGCTA  90
V  98.3% (284/289)  IGHV5-51*03  6    .................................................................G........................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  R  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_10176  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGAGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ........G..................................T..............................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_10176  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ...................................A.........C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  L  V  T  G  T  N  A  T  Y  G  L  D  V  W  G  Q  G  S  K  V  T  V  S  S
                    Query_10176  271  CATGTATTACTGTGCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTCTGGGGCCAAGGGAGCAAGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-8*02   10   ------------------------.......-----------------------------------------------------------  16
J  93.9% (46/49)    IGHJ6*02     14   ------------------------------------------.......A.....................C..C...............  61

                                       
                                       
                    Query_10176  361  A  361
J  93.9% (46/49)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_320678

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           300     8e-84
IGHD2-15*01                                                                                           12.2    31   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CCTAAGGATTG	GGTGGT	TCCTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACCTAAGGATTGGGTGGTTCCTTACTACTTTGACCAC	ARPKDWVVPYYFDH	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	242	217	25	0	89.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  L  N  T  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_10177  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCCTCAATACTTACTACTGGACCTGGATCCGACAGCCCCCAGGGAAGGGACTGGAGT  93
V  89.7% (217/242)  IGHV4-59*01  50   .....TCC...A....C..................A...G..G...........G.........G.........................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  V  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  A  S  K  N  
                    Query_10177  94   GGATTGGCTATGTCTATTCCAGTGGGAGCACTAACTACAACCCCTCCCTCAAGAGCCGAGTCACCATATCACTGGACGCGTCCAAGAACC  183
V  89.7% (217/242)  IGHV4-59*01  140  .......G...A......A............C.......................T...............G.A...A............  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  F  C  A  R  P  K  D  W  V  V  P  Y  Y  
                    Query_10177  184  AGTTCTCCCTGAAACTGACCTCTGTGACCGCTGCCGACACGGCCCTCTATTTCTGTGCGCGACCTAAGGATTGGGTGGTTCCTTACTACT  273
V  89.7% (217/242)  IGHV4-59*01  230  .............G....G...............G.........G.G....A.......A..----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD2-15*01  14   -------------------------------------------------------------------------......-----------  19
J  97.9% (47/48)    IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10177  274  TTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.9% (47/48)    IGHJ4*02     7    .....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_94781

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         322     2e-90
IGHD3-9*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTGCAGATCACC	ATATTTTGACTGGTTA	CTTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCTGCAGATCACCATATTTTGACTGGTTACTTTACTAC	ASCRSPYFDWLLYY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	26	26	26	0	0	100
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	125	24	18	6	0	75
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                        <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                           L  R  L  S  C  A  A  S  G  F  S  F  S  S  S  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_10178    1    CCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCCTTCAGCAGCTCTGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGGAGT  90
V  92.2% (225/244)  IGHV3-30-3*01  50   ................................A.......T....A....................................G.......  139
                                           L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  

                                        ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                        W  V  A  I  I  S  H  D  G  N  E  K  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  N  
                    Query_10178    91   GGGTGGCAATCATTTCACATGATGGAAACGAAAAGTACTACGCAGATTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCAACA  180
V  92.2% (225/244)  IGHV3-30-3*01  140  ........G.T..A...T.........G.A.T..A...........C.......A.................................G.  229
                                        W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                        3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                        N  T  L  Y  V  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  S  C  R  S  P  Y  F  D  W  
                    Query_10178    181  ATACGCTGTATGTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTACTTCTGTGCGAGCTGCAGATCACCATATTTTGACTGGT  270
V  92.2% (225/244)  IGHV3-30-3*01  230  .C.........C........................................T.A.........--------------------------  293
                                        N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  100.0% (16/16)   IGHD3-9*01     9    ----------------------------------------------------------------------------..............  22

                                        ---------->                                  
                                        L  L  Y  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10178    271  TACTTTACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  315
D  100.0% (16/16)   IGHD3-9*01     23   ..-------------------------------------------  24
J  97.4% (38/39)    IGHJ4*02       10   ------..................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_94782

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-16*02                                                                                           39.1    3e-07
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	CCAGGCCGG	TTACGTTTGGGGGCGTTATCGTT	TTTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCCAGGCCGGTTACGTTTGGGGGCGTTATCGTTTTTCCTACTTTGACTCC	ARGQAGYVWGRYRFSYFDS	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10179  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCATTCAGTGATTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGTCTGGAA  90
V  95.1% (233/245)  IGHV4-34*01  49   ...................................C.......G...........G...........................G.....G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  K  H  S  G  S  T  Y  S  N  P  S  L  K  S  R  V  T  T  S  V  D  T  S  K  N 
                    Query_10179  91   TGGATTGGGGAAATCAAGCATAGTGGAAGCACCTACTCCAACCCGTCCCTCAAGAGTCGAGTCACCACATCAGTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  .................T...............A...A.............................T......................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  Q  A  G  Y  V  W  G  R 
                    Query_10179  181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGCGAGGCCAGGCCGGTTACGTTTGGGGGCGT  270
V  95.1% (233/245)  IGHV4-34*01  229  .............A......C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  95.7% (22/23)    IGHD3-16*02  10   --------------------------------------------------------------------------.............A..  25

                                      ----------------------->                                  
                                       Y  R  F  S  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10179  271  TATCGTTTTTCCTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  95.7% (22/23)    IGHD3-16*02  26   .......---------------------------------------------------  32
J  97.9% (46/47)    IGHJ4*02     2    -----------...........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_94783

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           335     4e-94
IGHD6-19*01                                                                                           12.2    32   
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-19*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCTTG	GCACTGGCT	CCTCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATCGCTTGGCACTGGCTCCTCGTGCTTTCGATGTC	TRDRLALAPRAFDV	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	235	21	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  G  D  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10180  1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCAATTTTGGTGATTATGCTATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  91.8% (235/256)  IGHV3-49*04  47   ....................................CC...................G.....................G..........  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  L  G  F  I  R  T  T  A  Y  G  A  T  T  E  Y  A  A  S  V  E  D  R  L  T  I  S  R  D  
                    Query_10180  91   AGTGGTTAGGTTTCATAAGAACAACAGCTTATGGTGCGACAACAGAGTACGCCGCGTCTGTGGAGGACAGACTAACCATCTCAAGAGATG  180
V  91.8% (235/256)  IGHV3-49*04  137  .....G..........T....GC.A...........G.........A...............A.A.G....T.C................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  T  R  D  R  L  A  L  
                    Query_10180  181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAGAGTGAAGACACAGCCGTGTATTATTGTACTAGAGATCGCTTGGCACTGG  270
V  91.8% (235/256)  IGHV3-49*04  227  ........................................A.CC..G.................C...........--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  88.9% (8/9)      IGHD6-19*01  8    -----------------------------------------------------------------------------------...G...  14

                                      IMGT--------------->                                  
                                      A  P  R  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10180  271  CTCCTCGTGCTTTCGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
D  88.9% (8/9)      IGHD6-19*01  15   ..----------------------------------------------------  16
J  97.9% (46/47)    IGHJ3*01     4    -------......T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_94784

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     3e-91
IGHD2-8*02                                                                                            12.2    33   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AGACCCCCCAAAAGGTTTCGTT	TATAGTTCTGGT	TTTCGGGCCGCTGCCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAAGACCCCCCAAAAGGTTTCGTTTATAGTTCTGGTTTTCGGGCCGCTGCCCAC	AKEDPPKGFVYSSGFRAAAH	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  V  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  G  P  G  K  G  L  
                    Query_10181  1    GGTCCCTGAGACTCTCCTGTGAAGTCTCTGGATTTACCTTCAGTACCTATGCCATGAGCTGGGTCCGCCAGGGTCCAGGGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-23*01  47   .....................C..C.........C.....T..C.G..........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  A  S  M  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10181  91   AGTGGGTCTCAGGTATAAGTGGTAGCGGTGCTAGTATGTACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.6% (229/250)  IGHV3-23*01  137  ............C...T........T....G...C.CA....................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  Q  I  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  K  E  D  P  P  K  G  F  
                    Query_10181  181  AGAACACGCTGTATCTGCAGATCAACAGCCTGAGAGTCGAAGACACGGCCCTATATTATTGCGCGAAAGAAGACCCCCCAAAAGGTTTCG  270
V  91.6% (229/250)  IGHV3-23*01  227  ...................A..G.............C...G.........G.......C..T........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      R3-IMGT------------------------>                                  
                                      V  Y  S  S  G  F  R  A  A  A  H  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10181  271  TTTATAGTTCTGGTTTTCGGGCCGCTGCCCACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  336
D  83.3% (10/12)    IGHD2-8*02   5    --...T..A.....----------------------------------------------------  16
J  97.2% (35/36)    IGHJ4*02     13   ------------------------------.........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_320672

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           363     2e-102
IGHD2-2*01                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCT	TTGTACTAGTACCAGTTGCTA	CTCCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCTTTGTACTAGTACCAGTTGCTACTCCTTCTACTCGTACGGTCTGGACGTC	ARELCTSTSCYSFYSYGLDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  I  Y  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10182  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTATATATAGTATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-21*01  47   .............................................GC.....C....A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  T  Y  T  Y  Y  A  D  S  M  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10182  91   AGTGGGTCTCATCCATTAGTAGTAGTAGTACTTATACATACTACGCAGACTCAATGAAGGGCCGATTCACCATCTCTAGAGACAACGCCA  180
V  96.4% (241/250)  IGHV3-21*01  137  ..............................G...C.T................G......................C.............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  L  C  T  S  T  S  
                    Query_10182  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGCTTTGTACTAGTACCAGTT  270
V  96.4% (241/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD2-2*01   7    -------------------------------------------------------------------------.....G.........C.  23

                                      R3-IMGT------------------------>                                 
                                      C  Y  S  F  Y  S  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10182  271  GCTACTCCTTCTACTCGTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  90.5% (19/21)    IGHD2-2*01   24   ....-------------------------------------------------------------  27
J  94.5% (52/55)    IGHJ6*02     8    ----------.....AC......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_320670

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD6-25*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTC	ARQSSAGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	268	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  R  S  S  G  Y  D  F  L  D  Y
                    Query_10183  1    GCAGCTGGTGCAGTCTGGAGCAGAGCTAAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGAGTTCTGGGTACGACTTTCTCGACTA  90
V  92.1% (268/291)  IGHV5-51*01  6    .........................G.G..A.....C.........................A.G.......A...AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_10183  91   CTGGATCGTCTGGGTGCGCCAAATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGTCC  180
V  92.1% (268/291)  IGHV5-51*01  96   ........G............G..........................................................G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  K  A  S  G  T  A
                    Query_10183  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGCGCAGTCTGAAGGCCTCGGGCACCGC  270
V  92.1% (268/291)  IGHV5-51*01  186  .............................C...............C..................A....C.............A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        R  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_10183  271  CAGGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  360
V  92.1% (268/291)  IGHV5-51*01  276  ..T..................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  100.0% (48/48)   IGHJ6*02     15   -------------------------------------------...............................................  61

                                       
                                       
                    Query_10183  361  A  361
J  100.0% (48/48)   IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_105718

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            382     3e-108
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10184  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_10184  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  98.8% (247/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_10184  181  AGAACTCACTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  98.8% (247/250)  IGHV3-7*01   227  ..............C.......................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10184  271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_123399

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         338     4e-95
IGHD3-16*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	GGGGGAGT	GCGGGTATTCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGGGGAGTGCGGGTATTCCTCTAC	AREGGVRVFLY	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	104	10	0	91.2
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  V  R  Q  P  P  G  K  G  L 
                    Query_10185    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCTATTAGCAGTGGTTATTACTGGGGCTGGGTCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  93.5% (232/248)  IGHV4-38-2*02  49   ..................A................C..C...........C............A..........................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  V  Y  H  S  G  S  T  F  Y  S  P  S  L  R  S  R  V  S  I  S  V  D  T  S  K 
                    Query_10185    91   GAGTGGATTGGGAGTGTCTATCATAGTGGGAGCACCTTCTACAGCCCGTCCCTCAGGAGCCGAGTCAGCATTTCAGTAGACACGTCCAAG  180
V  93.5% (232/248)  IGHV4-38-2*02  139  ...............A.....................A.....A...........A...T.......C...A..................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                         N  Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  V  R  V  F  L 
                    Query_10185    181  AACCAGTTCTCCCTGAAGGTTAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGAAGGGGGAGTGCGGGTATTCCTC  270
V  93.5% (232/248)  IGHV4-38-2*02  229  ..................C.G..C................................C...........----------------------  296
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD3-16*01    18   ---------------------------------------------------------------------........-------------  25
J  100.0% (38/38)   IGHJ4*02       11   -----------------------------------------------------------------------------------------.  11

                                        -->                                  
                                         Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10185    271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (38/38)   IGHJ4*02       12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_123398

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           302     3e-84
IGHD2-15*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GTCGGGAAGAAC	AGTGGTG	TCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTCGGGAAGAACAGTGGTGTCTTTTGACTTA	AKSGRTVVSFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	220	27	0	89.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  T  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10186  1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCAACTTTAGCACGTATGCCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.1% (220/247)  IGHV3-23*01  47   ......................A.............C........GC..........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  N  S  T  K  Y  A  D  S  V  K  G  R  I  T  I  S  R  D  N  S  
                    Query_10186  91   AGTGGGTCTCAGCCATCAGTGGCAGTGGTAATAGCACAAAATATGCAGACTCCGTTAAGGGCCGGATCACCATCTCCAGAGACAATTCCA  180
V  89.1% (220/247)  IGHV3-23*01  137  .............T..T.....T......GG.......T.C..C...........G.........T........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  R  M  I  Y  L  Q  M  N  S  M  R  A  E  D  T  A  V  Y  L  C  A  K  S  G  R  T  V  V  S  
                    Query_10186  181  AGAGAATGATATATCTTCAAATGAACAGTATGAGAGCCGAGGACACGGCCGTATATCTTTGTGCGAAGTCGGGAAGAACAGTGGTGTCTT  270
V  89.1% (220/247)  IGHV3-23*01  227  ...AC.C.C.G.....G...........CC..........................TAC........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-15*01  11   -------------------------------------------------------------------------------.......----  17
J  90.7% (39/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                  
                                      F  D  L  W  G  Q  G  I  Q  V  T  V  S  S  
                    Query_10186  271  TTGACTTATGGGGCCAGGGAATCCAGGTCACCGTCTCCTCAG  312
J  90.7% (39/43)    IGHJ4*02     7    ......AC.............C..T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_102857

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           339     2e-95
IGHD3-3*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	245	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	28	26	22	4	0	84.6
CDR1-IMGT	29	58	30	29	1	0	96.7
FR2-IMGT	59	109	51	49	2	0	96.1
CDR2-IMGT	110	130	21	20	1	0	95.2
FR3-IMGT	131	244	114	106	8	0	93
CDR3-IMGT (germline)	245	251	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  N  W  I  R  Q  H  P  G  K  G  
                    Query_10187  3    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGCC  92
V  93.6% (233/249)  IGHV4-31*02  50   .....TCC...A......................................T.........G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  T  R  I  T  I  S  V  D  T  P  
                    Query_10187  93   TGGAGTGGATTGGGCACATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGACTCGAATTACCATATCAGTAGACACCCCCA  182
V  93.6% (233/249)  IGHV4-31*02  140  ..............T..........C..................................G....G...................GT.T.  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  
                    Query_10187  183  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTT  272
V  93.6% (233/249)  IGHV4-31*02  230  ..................................T..............C..G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-3*01   9    --------------------------------------------------------------------------------------....  12

                                      T------------------>                                  
                                      F  V  A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10187  273  TTGTCGCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  326
D  100.0% (7/7)     IGHD3-3*01   13   ...---------------------------------------------------  15
J  100.0% (43/43)   IGHJ4*02     6    -----------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_123393

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           411     4e-117
IGHD7-27*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	TCTGGGA	AACTGGGG	TAGGA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATCTGGGAAACTGGGGTAGGAGACTAC	AIWETGVGDY	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	275	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  R  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  R  S  Y
                    Query_10188  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGGAGCTA  90
V  95.8% (275/287)  IGHV1-69*01  6    ..................G.............A...................................................C.....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  G  I  I  P  L  F  R  T  P  N  Y  A  Q
                    Query_10188  91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGAGGGATCATCCCTCTCTTTCGGACACCAAACTACGCACA  180
V  95.8% (275/287)  IGHV1-69*01  96   ..............................................A.................A.....G.T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  Q  L  S  S  L  R  S  E  D  T  A
                    Query_10188  181  GAAGTTCCAGGACAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGCAACTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.8% (275/287)  IGHV1-69*01  186  ...........G..............................................G.G.............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        V  Y  Y  C  A  I  W  E  T  G  V  G  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_10188  271  CGTATATTACTGTGCGATCTGGGAAACTGGGGTAGGAGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  347
V  95.8% (275/287)  IGHV1-69*01  276  ...G.............------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                              
D  100.0% (8/8)     IGHD7-27*01  3    ------------------------........---------------------------------------------  10
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------...........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_123392

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           291     5e-81
IGHD2-15*01                                                                                           14.1    8.6  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGGGGATTTCGAGAA	GGTGGTA	AATCGGTCAGT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGGGGATTTCGAGAAGGTGGTAAATCGGTCAGTTTTGCCTAC	ARDGGFREGGKSVSFAY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  S  T  Y  T  M  N  W  L  R  Q  A  P  G  K  E  P  
                    Query_10189  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGGTTCAGTACTTATACTATGAACTGGCTTCGCCAGGCTCCAGGGAAGGAGCCGC  90
V  87.2% (218/250)  IGHV3-21*01  47   ....................................CC.......GC....GC.........G.C...................G..T.G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  S  V  S  G  D  G  T  Y  I  Y  Y  A  E  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10189  91   AATGGGTCGCATCTGTGAGTGGAGATGGAACCTACATATACTACGCAGAATCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  87.2% (218/250)  IGHV3-21*01  137  .G......T....CA.T...A.TAG.A.T.GT.................C...G...................................A  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      E  N  S  V  F  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  G  G  F  R  E  G  
                    Query_10189  181  AGAACTCAGTGTTTCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCTGTCTATTATTGTGCGAGAGACGGGGGATTTCGAGAAGGTG  270
V  87.2% (218/250)  IGHV3-21*01  227  ........C...A.......................C...............G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-15*01  14   --------------------------------------------------------------------------------------....  17

                                      GT-------------------->                                  
                                      G  K  S  V  S  F  A  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_10189  271  GTAAATCGGTCAGTTTTGCCTACTGGGGCCAGGGAACCCTTGTCATCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD2-15*01  18   ...------------------------------------------------------  20
J  93.0% (40/43)    IGHJ4*02     6    --------------....A.....................G....C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_123391

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         346     2e-97
IGHD5-12*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCGGGGAGGAT	TGGCTACGA	GACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCGGGGAGGATTGGCTACGAGACCCCCTTTGACCTC	ARAGRIGYETPFDL	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_10190    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTACTCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  95.1% (233/245)  IGHV4-38-2*02  49   ................................................T.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K 
                    Query_10190    91   GAGTGGATTGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAG  180
V  95.1% (233/245)  IGHV4-38-2*02  139  ......................A.........C.........A..............A........................C.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  Q  F  S  L  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  T 
                    Query_10190    181  AACCAGTTCTCGTTGAATCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGGGCGGGGAGGATTGGCTACGAGACC  270
V  95.1% (233/245)  IGHV4-38-2*02  229  ...........CC....G....G...........C...............G..............-------------------------  293
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (9/9)     IGHD5-12*01    11   -----------------------------------------------------------------------------.........----  19

                                        ----------->                                  
                                         P  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10190    271  CCCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.5% (42/44)    IGHJ4*02       5    --.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_123390

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           394     7e-112
IGHD3-9*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACGCCATACGCCGGGT	TTACGATCTTTTGACTGG	N/A	TACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACGCCATACGCCGGGTTTACGATCTTTTGACTGGTACCTTGACTCC	ARGRHTPGLRSFDWYLDS	291	344	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	77	72	68	4	0	94.4
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	104	10	0	91.2
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	292	272	20	0	93.2


Alignments

                                      <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                       V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  R 
                    Query_10191  6    GTCCAGCTTGTGCAGTCTGGAGGTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACGTTTAGCAGA  95
V  93.2% (272/292)  IGHV1-18*01  4    ..T.....G.............C...G.....................................................C....C...C  93
                                       V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S 

                                      -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                       Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  K  N  G  N  T  N  Y  A 
                    Query_10191  96   TATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTAAAAATGGTAACACAAATTACGCA  185
V  93.2% (272/292)  IGHV1-18*01  94   ................................................................C.T.C..............C..T...  183
                                       Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A 

                                      --------------------------------------------FR3-IMGT--------------------------------------
                                       Q  R  V  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  F  D  D  T 
                    Query_10191  186  CAGAGGGTCCAGGGAAGAGTCACCATGACGACAGACACATCCACGAGTACAGCCTACATGGAGCTGCGGAGCCTGAGATTTGACGACACG  275
V  93.2% (272/292)  IGHV1-18*01  184  ....A.C.......C..............C.................C..................A............C..........  273
                                       Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T 

                                      --------------><----------------------CDR3-IMGT--------------------->                     
                                       A  V  Y  F  C  A  R  G  R  H  T  P  G  L  R  S  F  D  W  Y  L  D  S  W  G  Q  G  T  L  V 
                    Query_10191  276  GCCGTGTATTTCTGTGCGAGAGGACGCCATACGCCGGGTTTACGATCTTTTGACTGGTACCTTGACTCCTGGGGCCAGGGAACCCTGGTC  365
V  93.2% (272/292)  IGHV1-18*01  274  ..........A...........--------------------------------------------------------------------  295
                                       A  V  Y  Y  C  A  R                                                                      
D  94.4% (17/18)    IGHD3-9*01   4    ---------------------------------------.......A..........---------------------------------  21
J  95.7% (44/46)    IGHJ4*02     3    ---------------------------------------------------------...T......A......................  35

                                                   
                                       T  V  S  S  
                    Query_10191  366  ACCGTCTCCTCAG  378
J  95.7% (44/46)    IGHJ4*02     36   .............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_123397

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           307     1e-85
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGGGCGGTAT	CTATGATAGTAATTTTTATTAC	GACTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGGGCGGTATCTATGATAGTAATTTTTATTACGACTTT	ARGGGIYDSNFYYDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	219	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  P  G  S  S  I  S  P  Y  Y  W  S  W  I  R  Q  T  P  G  K  E  L  D 
                    Query_10192  1    ACCCTGTCCCTCACCTGCAGTGTCCCTGGTAGTTCCATCAGTCCTTATTACTGGAGCTGGATCCGGCAGACCCCAGGGAAGGAACTGGAT  90
V  90.5% (219/242)  IGHV4-59*01  49   ...................C....T.....G.C.........AG...C.....................C............G......G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  T  G  S  T  N  Y  N  P  A  L  K  S  R  V  S  L  S  I  D  T  S  K  H 
                    Query_10192  91   TGGATTGGATACATCCACTACACTGGGAGCACCAACTACAATCCCGCCCTCAAGAGTCGAGTCAGCCTATCAATAGACACGTCCAAGCAC  180
V  90.5% (219/242)  IGHV4-59*01  139  ........G..T...T.T....G..................C...T..................C.A.....G..............A..  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  I  Y  D  S  N  F 
                    Query_10192  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGGGGGGGCGGTATCTATGATAGTAATTTT  270
V  90.5% (219/242)  IGHV4-59*01  229  ...................G...........................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  86.4% (19/22)    IGHD3-22*01  7    --------------------------------------------------------------------------...........G.GG.  22

                                      ----------->                                  
                                       Y  Y  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10192  271  TATTACGACTTTTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  316
D  86.4% (19/22)    IGHD3-22*01  23   ......----------------------------------------  28
J  97.1% (33/34)    IGHJ4*02     15   ------------............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_123395

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            364     5e-103
IGHD5-12*01                                                                                           27.6    8e-04 
IGHJ6*02                                                                                              106     3e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCAAAG	GTGGATATAGTGGC	CGCAAGTC	TTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCAAAGGTGGATATAGTGGCCGCAAGTCTTATTATTACTACTACGGTATGGACGTC	ARVKGGYSGRKSYYYYYGMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10193  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-7*01   47   ..............................................C...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  F  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10193  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATTCTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (241/249)  IGHV3-7*01   137  .......................................A..................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  M  S  L  Y  M  E  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  V  K  G  G  Y  S  G  
                    Query_10193  181  AGATGTCACTGTATATGGAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGAGTCAAAGGTGGATATAGTGGCC  270
V  96.8% (241/249)  IGHV3-7*01   227  ...AC.........C..C..................C................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD5-12*01  1    ---------------------------------------------------------------------------..............-  14

                                      DR3-IMGT-------------------------->                                 
                                      R  K  S  Y  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10193  271  GCAAGTCTTATTATTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  338
J  96.7% (59/61)    IGHJ6*02     2    -------...C..C......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_350483

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           321     7e-90
IGHD3-10*01                                                                                           12.2    32   
IGHJ2*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATAGTCATAATTAGG	TCGGGG	GATAAAAGC	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGAGATAGTCATAATTAGGTCGGGGGATAAAAGCTACTTCGATCTC	AREIVIIRSGDKSYFDL	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  Q  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10194  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCAGTATTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*01  49   ..........................................AGT..C..C.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  H  Y  T  G  R  T  N  Y  N  P  S  L  K  S  Q  G  T  M  A  V  D  T  S  K  N 
                    Query_10194  91   TGGATTGGGAACATCCATTACACTGGGAGGACCAACTACAACCCCTCCCTCAAGAGTCAAGGCACCATGGCCGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*01  139  .........T.T...T......G......C............................G..T......AT.A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  D  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  I  V  I  I  R  S  G  D 
                    Query_10194  181  CAATTCTCCCTGAAGCTGGACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGCGAGAGATAGTCATAATTAGGTCGGGGGAT  270
V  91.8% (225/245)  IGHV4-59*01  229  ..G...............AG............T...........................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-10*01  14   ---------------------------------------------------------------------------------......---  19

                                      ----------------->                                  
                                       K  S  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10194  271  AAAAGCTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  322
J  100.0% (46/46)   IGHJ2*01     8    ------..............................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_268407

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTCC	AKDNTYSSGYSPLDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  L  R  Q  A  P  G  K  G  P  
                    Query_10195  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGCTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  92.0% (230/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...G........................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  S  G  S  S  T  H  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_10195  91   AGTGGGTCTCAGCGATTACTGGGAGTGGTAGTAGTACACACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  92.0% (230/250)  IGHV3-23*01  137  .............T....G...T......G....C...T.....G......................................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  M  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_10195  181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGTCGAGGACACGGCCATGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  92.0% (230/250)  IGHV3-23*01  227  ...............................G....C.............G.A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10195  271  ATTCACCCCTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  97.6% (41/42)    IGHJ4*02     7    ---------......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_350481

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           310     1e-86
IGHD5-18*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTG	TACAGTTATGGTT	TCCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGTACAGTTATGGTTTCCAATACTACTTTGACTCC	ARLYSYGFQYYFDS	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	22	8	0	73.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	223	25	0	89.9


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  M  S  I  Y  D  Y  F  W  A  W  I  R  Q  P  P  G  K  G  
                    Query_10196  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATGAGTATTTATGATTACTTCTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  89.9% (223/248)  IGHV4-39*01  50   .....TCC...A....C....................C..C.G.AG.AG.....A.....G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  V  Y  Y  A  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_10196  94   TGGAGTGGATTGGGAGTGTCTATTATGCTGGGAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCCGTAGACACGTCCG  183
V  89.9% (223/248)  IGHV4-39*01  140  .................A........AG.....G.................................C.....................A  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      E  N  Q  F  S  L  K  M  R  S  A  T  A  A  D  T  A  V  Y  F  C  A  R  L  Y  S  Y  G  F  Q  
                    Query_10196  184  AGAACCAGTTCTCCCTGAAAATGAGGTCTGCGACCGCCGCAGACACGGCTGTGTATTTCTGTGCGAGATTGTACAGTTATGGTTTCCAAT  273
V  89.9% (223/248)  IGHV4-39*01  230  ...................GC....C....T..........................A..........----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD5-18*01  6    -----------------------------------------------------------------------.....C.......------  18

                                      ------------->                                  
                                      Y  Y  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10196  274  ACTACTTTGACTCCTGGGGCCAGGGAGCCCTAGTCACCGTCTCCTCAG  321
J  93.8% (45/48)    IGHJ4*02     1    ............A.............A....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_350480

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         360     1e-101
IGHD3-10*01                                                                                           12.2    32    
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ATGTACGTACATAAA	GGGGAG	GC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAATGTACGTACATAAAGGGGAGGCTATGGACGTC	ARMYVHKGEAMDV	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_10197    4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATCAGTAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  96.4% (239/248)  IGHV4-30-4*01  50   .....TCC...A....CA......................C.......A.........................................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_10197    94   TGGAGTGGATTGGGTACATCTACTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCA  183
V  96.4% (239/248)  IGHV4-30-4*01  140  ......................T...................................................................  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  M  Y  V  H  K  G  E  
                    Query_10197    184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAATGTACGTACATAAAGGGGAGG  273
V  96.4% (239/248)  IGHV4-30-4*01  230  ....................................................................----------------------  297
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01    16   -----------------------------------------------------------------------------------......-  21

                                        ---------->                                 
                                        A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10197    274  CTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  100.0% (43/43)   IGHJ6*02       20   -...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_350486

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           380     1e-107
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*01                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGC	TAGTAGTGTTTATTAC	AGAGATGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGCTAGTAGTGTTTATTACAGAGATGGCTTTGACTAC	ARGASSVYYRDGFDY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	75	69	66	3	0	95.7
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	46	5	0	90.2
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	293	5	4	1	0	80
Total	N/A	N/A	287	265	22	0	92.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  T  S  A  K  V  S  C  K  A  S  G  Y  T  F  D  A  Y 
                    Query_10198  7    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGACCTCAGCGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTGATGCCTAT  96
V  92.3% (265/287)  IGHV1-18*01  7    ...................C...................G......T..................................ACCAG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  R  Q  G  L  E  W  V  G  W  I  N  T  Y  T  G  D  T  N  Y  A  Q 
                    Query_10198  97   GGTATCAACTGGGTGCGACAGGCCCCTCGACAAGGACTTGAGTGGGTGGGTTGGATCAACACTTACACTGGTGACACAAACTATGCACAG  186
V  92.3% (265/287)  IGHV1-18*01  97   .......G...................G.......G.........A....A.......G.G......A....A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  R  L  R  Y  D  D  T  A 
                    Query_10198  187  AATCTCCAGGGCAGAGTCACCATGACCACTGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGACTGAGATATGACGACACGGCC  276
V  92.3% (265/287)  IGHV1-18*01  187  ..G..........................A......................................C.......C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  G  A  S  S  V  Y  Y  R  D  G  F  D  Y  W  G  H  G  T  L  V  T  V  S  S 
                    Query_10198  277  GTGTATTACTGTGCCAGGGGGGCTAGTAGTGTTTATTACAGAGATGGCTTTGACTACTGGGGCCACGGAACCCTGGTCACCGTCTCCTCA  366
V  92.3% (265/287)  IGHV1-18*01  277  ..............G..-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  93.8% (15/16)    IGHD3-22*01  13   -----------------------........G.......---------------------------------------------------  28
J  97.7% (43/44)    IGHJ4*01     5    -----------------------------------------------..................A........................  47

                                       
                                       
                    Query_10198  367  G  367
J  97.7% (43/44)    IGHJ4*01     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_350485

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-72*01                                                                                           339     2e-95
IGHD2-2*02                                                                                            19.9    0.16 
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-72*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTAGA	CAGTCGG	AGTACCAGGTGATATA	TTCCCT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGACAGTCGGAGTACCAGGTGATATATTCCCTCTACGGAATGGACGTC	ARQSEYQVIYSLYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	128	30	26	4	0	86.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	237	227	10	0	95.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  I  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  S 
                    Query_10199  12   TGTGCAGCCTCTGGATTCATCTTCAGTGACCACTACATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTAGT  101
V  95.8% (227/237)  IGHV3-72*01  64   ...................C....................................................................C.  153
                                       C  A  A  S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  T 

                                      --------CDR2-IMGT---------><----------------------------------------------------FR3-IMGT--
                                       R  N  K  V  N  R  Y  T  T  E  F  A  A  S  V  K  G  R  F  S  I  S  R  D  H  S  K  N  S  L 
                    Query_10199  102  AGAAATAAAGTTAACAGGTACACCACAGAATTCGCCGCGTCTGTGAAAGGCAGATTCAGCATCTCAAGAGATCATTCAAAGAACTCACTG  191
V  95.8% (227/237)  IGHV3-72*01  154  .....C....C......T.............A..........................C.............G.................  243
                                       R  N  K  A  N  S  Y  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  S  L 

                                      --------------------------------------------------><--------------------CDR3-IMGT---------
                                       V  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  Q  S  E  Y  Q  V  I  Y  S  L  Y 
                    Query_10199  192  GTTCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTACTGTGCTAGACAGTCGGAGTACCAGGTGATATATTCCCTCTAC  281
V  95.8% (227/237)  IGHV3-72*01  244  TA.......................................................---------------------------------  300
                                       Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R                                  
D  87.5% (14/16)    IGHD2-2*02   14   ----------------------------------------------------------------........C..C....----------  29
J  95.9% (47/49)    IGHJ6*02     14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                 
                                       G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10199  282  GGAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTGTCCTCA  326
J  95.9% (47/49)    IGHJ6*02     18   ..T...................................C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_268406

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            363     1e-102
IGHD4-17*01                                                                                           14.1    8.1   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAAGG	CGGTTACTAC	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAAGGCGGTTACTACCCCTTTGACTAC	ARDKGGYYPFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  T  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10200  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGGTACCTTTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-7*03   47   .........................................A...G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10200  91   AGTGGGTGGCCAACATAAACCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (241/250)  IGHV3-7*03   137  ...................G......................................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  V  Y  L  Q  M  N  G  L  R  G  E  D  T  A  L  Y  Y  C  A  R  D  K  G  G  Y  Y  P  
                    Query_10200  181  AAAACTCAGTGTATCTGCAAATGAACGGCCTGAGAGGCGAGGACACGGCCCTGTATTACTGTGCGAGAGATAAAGGCGGTTACTACCCCT  270
V  96.4% (241/250)  IGHV3-7*03   227  .G......C.................A.........C.............G...................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD4-17*01  7    ----------------------------------------------------------------------------....G.....----  16
J  97.4% (38/39)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                             
                                      F  D  Y  W  G  Q  G  T  P  V  T  V  S
                    Query_10200  271  TTGACTACTGGGGCCAGGGAACCCCGGTCACCGTCTC  307
J  97.4% (38/39)    IGHJ4*02     7    ........................T............  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_350489

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           369     2e-104
IGHD3-3*01                                                                                            44.9    5e-09 
IGHJ5*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCCA	TATTACGATTTTTGGAGTGGTTA	CCCAGGCCTCA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGATCCATATTACGATTTTTGGAGTGGTTACCCAGGCCTCACC	TTDPYYDFWSGYPGLT	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	246	10	0	96.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  F  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10201  1    GGTCCCTGAGATTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAATGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.1% (246/256)  IGHV3-15*01  47   .......T...C..................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  N  K  T  D  G  G  T  A  A  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_10201  91   AGTGGGTTGGCCGTATTAAAAACAAAACTGATGGTGGGACAGCAGCCTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  96.1% (246/256)  IGHV3-15*01  137  .....................G...................A...A............................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  R  N  T  V  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  D  P  Y  Y  D  
                    Query_10201  181  ATTCAAGAAACACGGTCTATTTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATCCATATTACGATT  270
V  96.1% (246/256)  IGHV3-15*01  227  ......A.......C.G...C.......................................................--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (23/23)   IGHD3-3*01   2    --------------------------------------------------------------------------------..........  11

                                      R3-IMGT------------------>                                  
                                      F  W  S  G  Y  P  G  L  T  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10201  271  TTTGGAGTGGTTACCCAGGCCTCACCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  330
D  100.0% (23/23)   IGHD3-3*01   12   .............-----------------------------------------------  24
J  97.2% (35/36)    IGHJ5*02     16   ------------------------...............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_350488

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           363     1e-102
IGHD3-3*01                                                                                            33.4    1e-05 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCCATCTTGGCGG	TTACGCTTTTTGGCGTGGTTATT	CCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCCATCTTGGCGGTTACGCTTTTTGGCGTGGTTATTCCCTTGACTAC	ARDPHLGGYAFWRGYSLDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10202  1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCCCCAGGCAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-33*01  47   ....................G........................G...........................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  H  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_10202  91   AGTGGGTGGCTGTTATATGGTATGATGGAAGTAATAAATACCATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCA  180
V  96.4% (241/250)  IGHV3-33*01  137  ..........A..............................T.............................A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  K  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  H  L  G  G  Y  
                    Query_10202  181  AGAAGACGTTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGAGATCCCCATCTTGGCGGTTACG  270
V  96.4% (241/250)  IGHV3-33*01  227  ....C...C.................................................C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.3% (21/23)    IGHD3-3*01   4    -------------------------------------------------------------------------------------.....  8

                                      -IMGT----------------------->                                  
                                      A  F  W  R  G  Y  S  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10202  271  CTTTTTGGCGTGGTTATTCCCTTGACTACTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  333
D  91.3% (21/23)    IGHD3-3*01   9    A.......A.........---------------------------------------------  26
J  97.6% (41/42)    IGHJ4*02     7    ---------------------............................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_247070

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           288     5e-80
IGHD3-10*01                                                                                           10.3    117  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCTCGGTCCCCT	TATGG	CATTGAGACGGACTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGTCCCTCGGTCCCCTTATGGCATTGAGACGGACTTT	VRVPRSPYGIETDF	235	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	20	4	0	83.3
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	120	21	18	3	0	85.7
FR3-IMGT	121	234	114	101	13	0	88.6
CDR3-IMGT (germline)	235	241	7	6	1	0	85.7
Total	N/A	N/A	228	206	22	0	90.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  I  V  S  S  F  Y  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  
                    Query_10203  14   GTGCAGCCTCTGGGTTCATCGTCAGTAGTTTCTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTT  103
V  90.4% (206/228)  IGHV3-53*01  65   ..................C.........CAA........G..................................................  154
                                         A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  

                                      --CDR2-IMGT-----><----------------------------------------------------FR3-IMGT------------
                                      Y  R  G  G  S  A  Q  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  E  S  R  N  T  V  Y  L  Q  
                    Query_10203  104  ATCGCGGTGGCAGCGCACAGTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCTAGAGACGAATCCAGGAACACGGTGTATCTTCAAA  193
V  90.4% (206/228)  IGHV3-53*01  155  ..A.......T...A..T.C..C................................C......A.T....A.......C............  244
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  

                                      ----------------------------------------><----------------CDR3-IMGT--------------->       
                                      M  N  R  L  R  V  E  D  T  A  T  Y  Y  C  V  R  V  P  R  S  P  Y  G  I  E  T  D  F  W  G  
                    Query_10203  194  TGAACCGCCTGAGAGTCGAGGACACGGCCACATATTACTGTGTGAGAGTCCCTCGGTCCCCTTATGGCATTGAGACGGACTTTTGGGGCC  283
V  90.4% (206/228)  IGHV3-53*01  245  .....A.........C.............GTG..........C.....------------------------------------------  292
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                            
D  100.0% (5/5)     IGHD3-10*01  8    --------------------------------------------------------------.....-----------------------  12
J  97.1% (33/34)    IGHJ4*02     15   -----------------------------------------------------------------------------------.......  21

                                                                 
                                      Q  G  T  L  V  I  V  S  S  
                    Query_10203  284  AGGGAACCCTGGTCATCGTCTCCTCAG  310
J  97.1% (33/34)    IGHJ4*02     22   ...............C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_24112

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            372     2e-105
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AGGAGACTTCTAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAAGGAGACTTCTATTACTACTACTACACTTTGGACGTC	AREGDFYYYYYTLDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10204  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  97.6% (244/250)  IGHV3-9*01   47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  D  T  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10204  91   AGTGGGTCTCAGGTATTAGTTGGAACAGTGATACCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (244/250)  IGHV3-9*01   137  .........................T....G..G........................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  R  E  G  D  F  Y  Y  Y  
                    Query_10204  181  AGAACTCCCTGTATCTGCAAATGAATAGTCTGAGACCTGAGGACACGGCCTTGTATTACTGTGCAAGAGAAGGAGACTTCTATTACTACT  270
V  97.6% (244/250)  IGHV3-9*01   227  .........................C.........G..............................A...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
J  94.7% (54/57)    IGHJ6*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---------------->                                 
                                      Y  Y  T  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10204  271  ACTACACTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  94.7% (54/57)    IGHJ6*02     13   .....GG.A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_24113

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_10205  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.5% (278/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_10205  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_10205  181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  .......C.....................................C...........G......A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  W  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_10205  271  CATATATTACTGGGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  ...G........T........---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_10205  361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_24110

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           329     3e-92
IGHD3-22*01                                                                                           14.1    8.7  
IGHJ3*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCATTCAAGAGTGACGACAGAG	GTGGTTA	AG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGATCATTCAAGAGTGACGACAGAGGTGGTTAAGGCTTTTGATATC	TTDHSRVTTEVVKAFDI	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	23	7	0	76.7
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	233	23	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  F  G  I  T  L  N  N  A  W  M  A  W  V  R  Q  A  P  G  K  G  L  
                    Query_10206  1    GGTCCCTGAGACTCTCCTGTGCAGCCTTTGGGATCACTTTAAATAATGCCTGGATGGCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.0% (233/256)  IGHV3-15*01  47   .......T...................C...AT.......C.G...C.........AG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  S  K  D  A  G  E  T  A  D  Y  A  A  P  A  E  G  R  F  T  I  S  R  D  
                    Query_10206  91   AGTGGGTTGGCCGTATTAGAAGCAAAGATGCTGGTGAAACAGCAGACTACGCCGCGCCCGCGGAAGGCAGATTCACCATCTCAAGAGATG  180
V  91.0% (233/256)  IGHV3-15*01  137  ..................A.......AC..A.....GG...A..........T..A....T.A...........................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  K  N  T  M  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  D  H  S  R  V  
                    Query_10206  181  ACTCAAAAAACACGATGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTATTGTACCACAGATCATTCAAGAGTGA  270
V  91.0% (233/256)  IGHV3-15*01  227  .T............C.................................................C...........--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 

                                      DR3-IMGT-------------------->                                  
                                      T  T  E  V  V  K  A  F  D  I  W  G  Q  G  T  T  V  T  V  S  S  
                    Query_10206  271  CGACAGAGGTGGTTAAGGCTTTTGATATCTGGGGCCAAGGGACAACGGTCACCGTCTCCTCAG  333
D  100.0% (7/7)     IGHD3-22*01  18   --------.......------------------------------------------------  24
J  95.7% (44/46)    IGHJ3*02     5    -----------------............................T............T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_24116

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           355     3e-100
IGHD2-2*01                                                                                            14.1    8.2   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGTG	TGCTATG	AGGGCTGCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGTGTGCTATGAGGGCTGCCACTTTGACTAC	ARVVCYEGCHFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  H  S  Y  E  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10207  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCCATAGTTATGAAATACACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-48*03  47   .........................................AG............GA.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  G  S  T  T  I  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  A  
                    Query_10207  91   AGTGGGTTTCATATATTAGTACTGGTAGTACTACAATATACTACGCAGACTCTGTGAAGGGCCGATTCATCATCTCCAGAGACAACGCCA  180
V  95.6% (238/249)  IGHV3-48*03  137  .............C.......G.A..G...G...C..................................C....................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  V  C  Y  E  G  C  
                    Query_10207  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGTAGTGTGCTATGAGGGCTGCC  270
V  95.6% (238/249)  IGHV3-48*03  227  .....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-2*01   23   --------------------------------------------------------------------------.......---------  29

                                      ---------->                                  
                                      H  F  D  Y  W  G  Q  G  T  L  V  T  V  A  S  
                    Query_10207  271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCGCCTCAG  315
J  97.8% (44/45)    IGHJ4*02     4    ......................................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_142946

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           416     2e-118
IGHD1-26*01                                                                                           10.3    137   
IGHJ5*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	GGAGC	ACATCAATGCCTCGGACGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGATCGGAGCACATCAATGCCTCGGACGGACTGGTGCGACACC	GRDRSTSMPRTDWCDT	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_10208  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACGTTTACCAGTTAT  91
V  95.9% (278/290)  IGHV1-18*01  7    .............................................................................C........C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  T  Y  N  G  D  T  N  Y  A  Q 
                    Query_10208  92   GGTATCAGCTGGGTGCGCCAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCACTTACAATGGTGACACAAACTATGCACAG  181
V  95.9% (278/290)  IGHV1-18*01  97   .................A................................A.........G...........A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  L  T  T  D  T  S  M  S  T  A  Y  M  E  V  R  S  L  R  S  D  D  T  A 
                    Query_10208  182  AAGTTCCAGGGCAGAGTCACCCTGACCACAGACACATCCATGAGCACAGCCTACATGGAGGTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.9% (278/290)  IGHV1-18*01  187  ...C.................A..................C...................C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  G  R  D  R  S  T  S  M  P  R  T  D  W  C  D  T  W  G  E  G  T  L  V  T  V  S 
                    Query_10208  272  GTGTATTATTGTGGGAGAGATCGGAGCACATCAATGCCTCGGACGGACTGGTGCGACACCTGGGGCGAGGGAACCCTGGTCACCGTCTCC  361
V  95.9% (278/290)  IGHV1-18*01  277  ........C....C......----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (5/5)     IGHD1-26*01  10   ----------------------.....---------------------------------------------------------------  14
J  93.6% (44/47)    IGHJ5*02     4    ----------------------------------------------......T....C........C.......................  47

                                         
                                       S 
                    Query_10208  362  TCA  364
J  93.6% (44/47)    IGHJ5*02     48   ...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_24118

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           349     3e-98
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAG	GACCCCCCC	ATTACTATGATA	CTGATGGTCCCTATGCGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAAAGGACCCCCCCATTACTATGATACTGATGGTCCCTATGCGAACTAC	VKGPPHYYDTDGPYANY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  L  R  F  S  I  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10209  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTACGCTTCAGTATCTATACTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  94.8% (236/249)  IGHV3-64*05  47   ..................................CAC........G....G.......................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  S  N  G  G  R  T  Y  Y  P  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10209  91   AATATGTTTCAGCTATTAGCAGTAATGGGGGTAGAACATACTACCCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (236/249)  IGHV3-64*05  137  ...................T..............C.........G.............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K  G  P  P  H  Y  Y  D  
                    Query_10209  181  AGAACACGCTGTATCTTCAAATGAACAGTCTGAGAGCTGAGGACACGGCTGTATATTATTGTGTCAAAGGACCCCCCCATTACTATGATA  270
V  94.8% (236/249)  IGHV3-64*05  227  ..............G.........G...........................G.....C.....G....---------------------  295
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (12/12)   IGHD3-22*01  3    ------------------------------------------------------------------------------............  14

                                      GT-------------------->                                 
                                      T  D  G  P  Y  A  N  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_10209  271  CTGATGGTCCCTATGCGAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  326
J  100.0% (38/38)   IGHJ4*02     10   ------------------......................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_24119

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATATA	CTACGATT	GTTCAAGGC	TCGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATATATACTACGATTGTTCAAGGCTCGAGCCC	AKDIYYDCSRLEP	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  F  C  A  T  S  G  F  T  F  S  N  Y  A  M  T  W  V  R  Q  A  P  G  R  G  L  
                    Query_10210  1    GGTCCCTGAGACTCTTCTGTGCAACGTCTGGATTCACCTTTAGCAACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGC  90
V  90.8% (227/250)  IGHV3-23*01  47   ...............C.......G.C...................G...........G.......................A.......G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  C  V  S  G  G  G  E  T  T  H  Y  R  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10210  91   AGTGGGTCTCATGTGTTAGTGGTGGTGGTGAAACAACACACTACAGAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  90.8% (227/250)  IGHV3-23*01  137  ...........GC.A........A......GT.GC...T.....GC............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      M  D  T  L  Y  L  Q  M  H  G  L  R  A  E  D  T  A  I  Y  Y  C  A  K  D  I  Y  Y  D  C  S  
                    Query_10210  181  TGGACACGCTGTATCTGCAAATGCACGGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGATATATACTACGATTGTTCAA  270
V  90.8% (227/250)  IGHV3-23*01  227  A.A....................A..A.......................G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD5-12*01  14   ----------------------------------------------------------------------------........------  21

                                      ---------->                                  
                                      R  L  E  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10210  271  GGCTCGAGCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ5*02     10   ---....C.....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_256099

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           325     2e-91
IGHD1-7*01                                                                                            10.3    115  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTCGCGGGAAT	GAACT	C	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATGTCGCGGGAATGAACTCCTAC	ARDVAGMNSY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  F  W  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_10211  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAATTTTTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-74*01  47   .............................................GC.AC......................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  A  R  I  D  T  Y  G  S  I  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10211  91   TGTGGGTCGCACGCATTGATACTTATGGGAGTATCACAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.6% (229/250)  IGHV3-74*01  137  ........T....T...A...G.G.........G.....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  V  F  L  Q  M  N  S  L  R  G  D  D  T  A  V  Y  F  C  A  R  D  V  A  G  M  N  S  
                    Query_10211  181  AGAACACAGTGTTTCTGCAAATGAACAGTCTGCGAGGCGACGACACGGCTGTGTATTTTTGTGCCAGAGATGTCGCGGGAATGAACTCCT  270
V  91.6% (229/250)  IGHV3-74*01  227  .......GC...A...................A...C...G................AC.....A.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-7*01   11   ----------------------------------------------------------------------------------.....---  15
J  100.0% (38/38)   IGHJ4*02     11   ----------------------------------------------------------------------------------------..  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10211  271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (38/38)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_264749

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD4-4*01                                                                                            16.1    2.2   
IGHJ3*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-4*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGGAAGACA	GACTACAG	C	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGGAAGACAGACTACAGCGATGCTTTTGATATG	AWKTDYSDAFDM	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	238	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10212  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.7% (238/246)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  Y  T  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  M  S 
                    Query_10212  91   CTGGAGTGGATTGGCTACATCTCTTACACTGGGAGAACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACATGTCT  180
V  96.7% (238/246)  IGHV4-31*03  139  ..............G.......A.....G......C.................................................C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  W  K  T  D  Y  S  D  A 
                    Query_10212  181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACGGCCGCGGACACGGCCGTCTATTACTGTGCGTGGAAGACAGACTACAGCGATGCT  270
V  96.7% (238/246)  IGHV4-31*03  229  ...................A...............T.................G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (8/8)     IGHD4-4*01   2    ---------------------------------------------------------------------------........-------  9
J  98.0% (48/49)    IGHJ3*02     2    ------------------------------------------------------------------------------------......  7

                                      -------->                                  
                                       F  D  M  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10212  271  TTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  313
J  98.0% (48/49)    IGHJ3*02     8    ........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_256095

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           290     2e-80
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCCCCGGGTG	AGCAATGGCTGG	GGAACTTCCTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCCCGGGTGAGCAATGGCTGGGGAACTTCCTATAATTACGGGATGGCTGCC	ARGPRVSNGWGTSYNYGMAA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	220	25	6	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  W  R  Q  P  P  G  K  G 
                    Query_10213  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGGCGCCAGCCACCAGGGAAGGGC  90
V  87.6% (220/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....ATC........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_10213  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  87.6% (220/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  A  T  A  V  Y  Y  C  A  R  G  P  R  V  S  N  G 
                    Query_10213  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGCCACGGCTGTGTATTATTGTGCGAGAGGCCCCCGGGTGAGCAATGGC  270
V  87.6% (220/251)  IGHV4-34*01  223  ....................GC............C........A...............C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  S  Y  N  Y  G  M  A  A  W  G  Q  G  T  A  V  S  F  S  S 
                    Query_10213  271  TGGGGAACTTCCTATAATTACGGGATGGCTGCCTGGGGCCAAGGGACCGCGGTCTCCTTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  85.4% (41/48)    IGHJ6*02     15   ------------------.....T....AC.T................A.....A..G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_264745

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           318     6e-89
IGHD3-10*01                                                                                           14.1    8.6  
IGHJ6*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACAGTAAA	GGGGGTTATT	GCGTGCCACCAGTACTTCGCTTG	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACAGTAAAGGGGGTTATTGCGTGCCACCAGTACTTCGCTTGGGACGTC	ARTVKGVIACHQYFAWDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10214  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCTTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.8% (223/243)  IGHV4-34*01  49   ................................G......................G...........................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  I  S  L  S  L  D  M  S  K  K 
                    Query_10214  91   TGGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGCATCTCCTTATCATTAGACATGTCCAAGAAG  180
V  91.8% (223/243)  IGHV4-34*01  139  .............................C..................C..A.......AG..A..A.....G......C.........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       K  F  S  V  K  V  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  A  C  H 
                    Query_10214  181  AAGTTCTCCGTGAAGGTGGCGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAACAGTAAAGGGGGTTATTGCGTGCCAC  270
V  91.8% (223/243)  IGHV4-34*01  229  C........C.....C..AGC..........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD3-10*01  17   -----------------------------------------------------------------------...A......---------  26

                                      -------------------->                                 
                                       Q  Y  F  A  W  D  V  G  G  Q  G  T  A  V  T  F  S  S 
                    Query_10214  271  CAGTACTTCGCTTGGGACGTCGGGGGCCAAGGGACCGCGGTCACCTTCTCCTCA  324
J  92.5% (37/40)    IGHJ6*02     23   --------------.......T..............A........G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_264746

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            353     9e-100
IGHD2-8*02                                                                                            19.9    0.15  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AAAGCGGGCTC	TACTGGTGGT	A	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAAAGCGGGCTCTACTGGTGGTAACTTTGACTAC	ARKAGSTGGNFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  T  H  Y  W  M  S  W  V  R  Q  A  P  G  K  W  L  
                    Query_10215  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTTACTCACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGTGGCTGG  90
V  95.6% (237/248)  IGHV3-7*03   47   ....................................CC....G.AG.....................................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  D  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10215  91   AGTGGGTTGCCGACATAAAGCAGGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (237/248)  IGHV3-7*03   137  .......G...A..........A...................................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  K  A  G  S  T  G  G  
                    Query_10215  181  AGAACTCAGTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAAAAGCGGGCTCTACTGGTGGTA  270
V  95.6% (237/248)  IGHV3-7*03   227  ........C.G.........................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD2-8*02   10   -------------------------------------------------------------------------------..........-  19

                                      ---------->                                  
                                      N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10215  271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (45/45)   IGHJ4*02     4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_264740

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD1-26*01                                                                                           10.3    120  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TGCCCCATATACGCAAAAAACTA	GAGCT	TTTCGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGCCCCATATACGCAAAAAACTAGAGCTTTTCGCCTTGACTAC	ASAPYTQKTRAFRLDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	228	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  F  S  G  D  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10216  1    ACCCTGTCCCTCACCTGCACTTTCTCTGGTGACTCCATCAGTAACTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.2% (228/242)  IGHV4-59*01  49   .....................G.........G...........GT.............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_10216  91   TGGATTGGCTATATCTATTACAGTGGGAACACCAACTACAACCCCTCCCTCAAAAGTCGAGTCACCATTTCAGTAGACACGTCGAAGAAG  180
V  94.2% (228/242)  IGHV4-59*01  139  ........G...................G........................G..............A..............C.....C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  R  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  S  A  P  Y  T  Q  K  T  R  A 
                    Query_10216  181  CAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGTGCCCCATATACGCAAAAAACTAGAGCT  270
V  94.2% (228/242)  IGHV4-59*01  229  .............A......C..................A.......G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  11   -------------------------------------------------------------------------------------.....  15

                                      -------------->                                  
                                       F  R  L  D  Y  W  G  Q  G  S  L  V  T  V  S  A  
                    Query_10216  271  TTTCGCCTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCGCAG  319
J  95.2% (40/42)    IGHJ4*02     7    -------....................A.................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_256090

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           369     2e-104
IGHD3-22*01                                                                                           16.1    2.5   
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCGTGGGGG	CTAAGATAGAAGTG	ACTGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGTGGGGGCTAAGATAGAAGTGACTGATGATGGCTTTGATATC	AGVGAKIEVTDDGFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	261	25	0	91.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  S  E  L  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  R  F  Y  G  H
                    Query_10217  1    GCAGCTGGTGCAGTCTGGATCAGAACTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGGTCTGGATACAGGTTTTACGGCCA  90
V  91.3% (261/286)  IGHV5-51*03  6    ...................G....GG........................A...............T...........C...AC.A..T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  T  I  Y  P  A  D  S  D  T  K  Y  S  P
                    Query_10217  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGACCATCTATCCTGCTGACTCTGATACCAAATACAGCCC  180
V  91.3% (261/286)  IGHV5-51*03  96   .....................................................T...........G..............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  D  G  H  I  T  I  S  A  D  K  S  I  S  T  A  Y  L  H  W  S  S  L  R  A  S  D  T  A
                    Query_10217  181  GTCCTTTGATGGCCACATCACCATCTCAGCCGACAAGTCCATCAGTACCGCTTACCTACACTGGAGCAGCCTGAGGGCCTCGGACACCGC  270
V  91.3% (261/286)  IGHV5-51*03  186  ......CC.A.....GG............................C.....C.....G..G.............A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        T  Y  Y  C  A  G  V  G  A  K  I  E  V  T  D  D  G  F  D  I  W  G  Q  G  T  M  V  T  V  S
                    Query_10217  271  CACATATTACTGTGCGGGCGTGGGGGCTAAGATAGAAGTGACTGATGATGGCTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTC  360
V  91.3% (261/286)  IGHV5-51*03  276  ..TG............--------------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                           
D  85.7% (12/14)    IGHD3-22*01  7    --------------------------...T.....T....--------------------------------------------------  20
J  96.0% (48/50)    IGHJ3*02     1    ---------------------------------------------.....CT......................................  45

                                           
                                        S  
                    Query_10217  361  TTCAG  365
J  96.0% (48/50)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_256093

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           438     5e-125
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	71	0	0	100
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	112	2	0	98.2
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	290	285	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  
                    Query_10218  7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACT  96
V  98.3% (285/290)  IGHV5-51*01  5    ..............................................................................G...T....G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  
                    Query_10218  97   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCC  186
V  98.3% (285/290)  IGHV5-51*01  95   .................................................................................G........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_10218  187  CGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCG  276
V  98.3% (285/290)  IGHV5-51*01  185  ..............................C...........................................................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------CDR3-IMGT----------------->                               
                                      A  M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_10218  277  CCATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  366
V  98.3% (285/290)  IGHV5-51*01  275  ....................----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (17/17)   IGHD5-18*01  2    ----------------------------.................---------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    ---------------------------------------------.............................................  45

                                         
                                      S  
                    Query_10218  367  CAG  369
J  100.0% (48/48)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_256092

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           318     6e-89
IGHD3-22*01                                                                                           39.1    3e-07
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	N/A	TTACTATGATAGTAGTGGTT	CCTACCTTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGTTACTATGATAGTAGTGGTTCCTACCTTAACTACTTTGACTAC	ARGYYDSSGSYLNYFDY	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  L  Y  G  G  S  F  S  G  H  Y  W  I  W  L  R  Q  S  P  G  K  G  L  E 
                    Query_10219  1    ACCCTGTCCCTCACCTGCGCTCTCTATGGTGGGTCCTTCAGTGGTCACTACTGGATTTGGCTCCGCCAGTCCCCCGGGAAGGGGCTGGAG  90
V  91.4% (224/245)  IGHV4-34*01  49   .....................G.......................T.........GC...A........C....A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  K  Y  N  S  S  L  K  S  R  V  A  M  S  I  D  A  S  K  S 
                    Query_10219  91   TGGATTGGGGAAATCAATCATAGTGGAAGCACGAAGTACAACTCGTCCCTCAAGAGTCGAGTCGCCATGTCAATAGACGCGTCCAAGAGT  180
V  91.4% (224/245)  IGHV4-34*01  139  ................................C..C......C....................A....A...G.....A.........AC  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  Y  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  Y  Y  D  S  S  G  S  Y 
                    Query_10219  181  CAATTCTACCTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCCAGAGGTTACTATGATAGTAGTGGTTCCTAC  270
V  91.4% (224/245)  IGHV4-34*01  229  ..G....C...........G...........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (20/20)   IGHD3-22*01  4    -----------------------------------------------------------------....................-----  23

                                      ----------------->                                  
                                       L  N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10219  271  CTTAACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  100.0% (48/48)   IGHJ4*02     1    ----................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_237240

Length=412
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           392     2e-111
IGHD1-26*01                                                                                           23.8    0.013 
IGHJ6*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGTCTTATGTCCCG	GTGGGAGCTACT	CCCTTAGAAGGGGCCGAGGACA	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGTCTTATGTCCCGGTGGGAGCTACTCCCTTAGAAGGGGCCGAGGACAACGGTATGGACGTC	ARDGSYVPVGATPLEGAEDNGMDV	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  N  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  S  F  T  N  H
                    Query_10220  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAACCCTGGGGCCTCAGTGAGGGTTTCCTGCAAGGCGTCTGGATACAGCTTCACCAATCA  90
V  93.1% (271/291)  IGHV1-46*01  6    ..................G..............G................A...............A..........C........GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  H  A  Q
                    Query_10220  91   CTATGTGCACTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGTCACGCACA  180
V  93.1% (271/291)  IGHV1-46*01  96   ....A...............................G............................................CT.......  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  T  T  V  Y  M  E  L  R  S  L  R  S  E  D  T  A
                    Query_10220  181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACAACCACAGTGTACATGGAACTACGTAGCCTGAGATCTGAGGACACGGC  270
V  93.1% (271/291)  IGHV1-46*01  186  ..........................................G.G......C........G..GA.C.......................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------------CDR3-IMGT------------------------------>     
                                        V  Y  Y  C  A  R  D  G  S  Y  V  P  V  G  A  T  P  L  E  G  A  E  D  N  G  M  D  V  W  G
                    Query_10220  271  CGTGTACTACTGTGCGAGAGATGGGTCTTATGTCCCGGTGGGAGCTACTCCCTTAGAAGGGGCCGAGGACAACGGTATGGACGTCTGGGG  360
V  93.1% (271/291)  IGHV1-46*01  276  ......T..............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD1-26*01  7    -------------------------------------............-----------------------------------------  18
J  100.0% (47/47)   IGHJ6*02     16   -----------------------------------------------------------------------...................  34

                                                                  
                                        Q  G  T  T  V  T  V  S  S 
                    Query_10220  361  CCAAGGGACCACGGTCACCGTCTCCTCA  388
J  100.0% (47/47)   IGHJ6*02     35   ............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40393728


Query= Query_188329

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           223     2e-60
IGHD3-3*01                                                                                            12.2    32   
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACATTTGACAG	TTTTGG	CCGACTTCATTCAAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACATTTGACAGTTTTGGCCGACTTCATTCAACCTACTTCTACGGCATGGACGCC	ARTFDSFGRLHSTYFYGMDA	231	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	20	5	4	1	0	80
CDR1-IMGT	21	44	24	20	4	0	83.3
FR2-IMGT	45	95	51	44	7	0	86.3
CDR2-IMGT	96	116	24	13	8	3	54.2
FR3-IMGT	117	230	114	98	16	0	86
CDR3-IMGT (germline)	231	236	6	6	0	0	100
Total	N/A	N/A	224	185	36	3	82.6


Alignments

                                      <FR1><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CD
                                         S  G  F  I  F  N  N  Y  E  M  S  W  V  R  Q  T  P  G  R  G  L  E  W  L  S  S  I  S  G  
                    Query_10221  16   CCTCGGGATTCATCTTCAATAATTATGAGATGAGTTGGGTCCGCCAGACTCCAGGGAGGGGACTGGAGTGGCTTTCATCCATCAGCGGTC  105
V  82.6% (185/224)  IGHV3-48*03  71   ....T.......C.....G..G......A....AC............G.........A...G.........G......A...T..TA..A  160
                                         S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  S  S  

                                      R2-IMGT------><----------------------------------------------------FR3-IMGT---------------
                                      R  G  H     S  S  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  D  K  S  A  L  Y  L  H  M  
                    Query_10221  106  GTGGTCA---CAGTTCGTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGACAAGAGTGCACTTTATCTGCACATGA  192
V  82.6% (185/224)  IGHV3-48*03  161  .....AGTAC..TA.AC................A.............................C.....ACT....G........A....  250
                                      S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  

                                      -------------------------------------><-------------------------CDR3-IMGT-----------------
                                      N  S  L  R  P  D  D  T  A  V  Y  Y  C  A  R  T  F  D  S  F  G  R  L  H  S  T  Y  F  Y  G  
                    Query_10221  193  ATAGCCTGAGACCCGACGACACGGCTGTCTACTATTGCGCGAGAACATTTGACAGTTTTGGCCGACTTCATTCAACCTACTTCTACGGCA  282
V  82.6% (185/224)  IGHV3-48*03  251  .C.........G....G...........T..T..C..T......----------------------------------------------  294
                                      N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                               
D  100.0% (6/6)     IGHD3-3*01   11   -------------------------------------------------------......-----------------------------  16
J  94.5% (52/55)    IGHJ6*02     8    ----------------------------------------------------------------------------.....A......T.  21

                                      ------->                                 
                                      M  D  A  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10221  283  TGGACGCCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  94.5% (52/55)    IGHJ6*02     22   ......T..................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_127626

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           272     2e-75
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	44	7	0	86.3
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	214	30	6	85.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_10222  4    CCCTGAGACTCTCCTGTGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  85.6% (214/250)  IGHV4-34*01  50   .....TCC...A....C.....C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      P  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_10222  94   CGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  85.6% (214/250)  IGHV4-34*01  134  T...G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  P  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_10222  184  AGAACCAGTTCCCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  85.6% (214/250)  IGHV4-34*01  224  ...........T.......GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_10222  274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_238757

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD1-26*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGA	AGTGGGAGC	ACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAAGTGGGAGCACAGACTAC	ARDRSGSTDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  F  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10223  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCTTCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   ....................................A........................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  V  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  I  D  T  S  K  N 
                    Query_10223  91   TGGATTGGCTATATATATTACACTGGGGTCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCTTATCAATAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G.....C.......G....AG......C..............................A.....G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  S  G  S  T  D  Y  W 
                    Query_10223  181  CAGTTCTCCCTGAAGCTGAGTTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGATCGAAGTGGGAGCACAGACTACTGG  270
V  95.1% (233/245)  IGHV4-59*01  229  ....................C................................C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD1-26*01  6    ---------------------------------------------------------------------.........------------  14
J  100.0% (40/40)   IGHJ4*02     9    ---------------------------------------------------------------------------------.........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_10223  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (40/40)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_240229

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           372     2e-105
IGHD2-2*01                                                                                            23.8    0.011 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAG	TTGTAGTAGTAACACCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGTTGTAGTAGTAACACCTGCTACTACGAAATGGACGTC	ARVSCSSNTCYYEMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	241	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10224  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.8% (241/244)  IGHV4-59*01  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10224  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGGTAGACACGTCCAAGAAC  180
V  98.8% (241/244)  IGHV4-59*01  139  .......................................................................A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  C  S  S  N  T  C  Y 
                    Query_10224  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTAAGTTGTAGTAGTAACACCTGCTAC  270
V  98.8% (241/244)  IGHV4-59*01  229  ...............................................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (16/18)    IGHD2-2*01   7    --------------------------------------------------------------------...........C..G...----  24
J  96.2% (50/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10224  271  TACGAAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  96.2% (50/52)    IGHJ6*02     15   ....GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_240228

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           346     2e-97
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TAAGATATCG	AGTAGTGG	CGTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAAGATATCGAGTAGTGGCGTCGACTAC	ASKISSSGVDY	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  V  G  Y  Y  W  T  W  I  R  Q  H  P  G  K  G  
                    Query_10225  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGTTGGTTACTACTGGACCTGGATCCGCCAGCACCCAGGCAAGGGCC  93
V  94.7% (234/247)  IGHV4-31*03  50   .....TCC...A.................................G..............G.....................G.......  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  
                    Query_10225  94   TGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCACTAGACAAGTCTA  183
V  94.7% (234/247)  IGHV4-31*03  140  .............................................................................G......C.....  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  R  F  S  L  K  L  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  S  K  I  S  S  S  G  V  
                    Query_10225  184  AGAACCGGTTCTCCCTGAAGCTGAGCTCTATGACTGCTGCGGACACGGCCGTGTACTACTGTGCGAGTAAGATATCGAGTAGTGGCGTCG  273
V  94.7% (234/247)  IGHV4-31*03  230  ......A......................G.......C.................T...........-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD3-22*01  14   -----------------------------------------------------------------------------........-----  21
J  100.0% (40/40)   IGHJ4*02     9    -----------------------------------------------------------------------------------------.  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10225  274  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (40/40)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_137178

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10226  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01   49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_10226  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01   139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_10226  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01   229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01   13   ----------------------------------------------------------------------.....C..G...--------  24

                                      ----------->                                  
                                       G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_10226  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_188324

Length=318
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     6e-98
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCTAGGAGATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCTAGGAGATCTTGACTAC	ASLGDLDY	238	261	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	232	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  R  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  Q 
                    Query_10227  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCGTTACTTCTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGCAG  90
V  95.9% (232/242)  IGHV4-59*01  49   ..........................................A......A.....G...............................G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  T  S  Q  N 
                    Query_10227  91   TGGATTGGATATATCTCTTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTGGACACGTCCCAGAAC  180
V  95.9% (232/242)  IGHV4-59*01  139  ........G.......A...C..........................................A..........A.........A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------CDR3-IMGT------>         
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  G  D  L  D  Y  W  G  Q 
                    Query_10227  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGTCTAGGAGATCTTGACTACTGGGGCCAG  270
V  95.9% (232/242)  IGHV4-59*01  229  ..............................................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------.................  23

                                                               
                                       G  T  L  V  T  V  S  S  
                    Query_10227  271  GGAACCCTGGTCACCGTCTCCTCAG  295
J  100.0% (42/42)   IGHJ4*02     24   .........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30726981


Query= Query_240221

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           402     3e-114
IGHD1-26*01                                                                                           18.0    0.68  
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCCCGGCAGG	GTGGGATCTACT	TG	ACGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTC	ARHGPAGWDLLDAMDV	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	104	10	0	91.2
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	276	19	0	93.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  N  F  N  
                    Query_10228  3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGTTCTGGATACAACTTTAACA  92
V  93.6% (276/295)  IGHV5-51*01  2    ........................................C.............A..........................G.....C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  N  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  P  D  T  R  Y  
                    Query_10228  93   GTAACTGGATCGGATGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACCCTGATACCAGATATA  182
V  93.6% (276/295)  IGHV5-51*01  92   .CT..........C..................................................T.........T.............C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  P  S  F  Q  G  H  V  T  I  T  A  D  K  S  T  T  T  A  Y  L  R  W  S  S  L  K  A  S  D  
                    Query_10228  183  GGCCGTCCTTCCAAGGCCACGTCACCATTACAGCCGACAAGTCCACCACCACCGCCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  93.6% (276/295)  IGHV5-51*01  182  .C.................G........CT...............T..G..............A..........................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      T  A  T  Y  Y  C  A  R  H  G  P  A  G  W  D  L  L  D  A  M  D  V  W  G  Q  G  T  T  V  T  
                    Query_10228  273  CCGCCACTTATTACTGTGCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCG  362
V  93.6% (276/295)  IGHV5-51*01  272  ......TG.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  91.7% (11/12)    IGHD1-26*01  7    -------------------------------------......G.....-----------------------------------------  18
J  97.9% (46/47)    IGHJ6*02     16   ---------------------------------------------------...G...................................  54

                                              
                                      V  S  S 
                    Query_10228  363  TCTCCTCA  370
J  97.9% (46/47)    IGHJ6*02     55   ........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_21091

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           330     1e-92
IGHD6-6*01                                                                                            10.3    121  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACCCCC	GCTCG	CTTTGCA	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACCCCCGCTCGCTTTGCAGACTTC	ATTPARFADF	258	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	44	44	29	0	15	65.9
CDR1-IMGT	45	68	24	23	1	0	95.8
FR2-IMGT	69	119	51	50	1	0	98
CDR2-IMGT	120	143	24	20	4	0	83.3
FR3-IMGT	144	257	114	112	2	0	98.2
CDR3-IMGT (germline)	258	261	4	4	0	0	100
Total	N/A	N/A	261	238	8	15	91.2


Alignments

                                      <-----------------FR1-IMGT-----------------><-------CDR1-IMGT------><--------------------F
                                         S  L  R  L  S  C  A  V  S  G  S  T  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  
                    Query_10229  1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATCCACAGCCTCTGGATTCACCTTCAGTGACTATTACATGAGCTGGATCCGCCAGGCTC  90
V  91.2% (238/261)  IGHV3-11*01  47   ........................---------------.........................C.........................  121
                                         S  L  R  L  S  C  A                 A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  

                                      R2-IMGT---------------------><-------CDR2-IMGT------><------------------------------------
                                      P  G  K  G  L  E  W  I  S  Y  I  S  L  S  G  R  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  
                    Query_10229  91   CAGGGAAGGGGCTGGAGTGGATTTCATACATCAGTCTTAGTGGTAGGACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCT  180
V  91.2% (238/261)  IGHV3-11*01  122  ....................G..........T...AG.........T...........................................  211
                                      P  G  K  G  L  E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  

                                      ----------------FR3-IMGT----------------------------------------------------><----------CD
                                      S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  T  P  
                    Query_10229  181  CCAGGGACAACGCCAAGAACTCACTGTATCTGCAGATGAACAGCCTGAGAGCCGAAGACACGGCCGTGTATTACTGTGCGACGACCCCCG  270
V  91.2% (238/261)  IGHV3-11*01  212  ..................................A....................G.........................---------  292
                                      S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A           
D  100.0% (5/5)     IGHD6-6*01   11   -----------------------------------------------------------------------------------------.  11

                                      R3-IMGT--------->                                  
                                      A  R  F  A  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10229  271  CTCGCTTTGCAGACTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  321
D  100.0% (5/5)     IGHD6-6*01   12   ....-----------------------------------------------  15
J  95.0% (38/40)    IGHJ4*02     9    -----------....A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_240223

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD6-19*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCG	GCAGTGGCTGGTAC	GGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCGGCAGTGGCTGGTACGGGATTGACTAC	AKDRGSGWYGIDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  I  P  G  K  G  L  E 
                    Query_10230  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGCTGGATCCGGCAGATCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   .............................................T.......................CC...................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_10230  91   TGGATTGGGTATATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  ....................C...................................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  D  R  G  S  G  W  Y  G  I 
                    Query_10230  181  CAGTTCTCCCTGAGGCTGAACTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAAAGATCGCGGCAGTGGCTGGTACGGGATT  270
V  96.3% (236/245)  IGHV4-59*01  229  .............A.....G...........................G.............G...-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (14/14)   IGHD6-19*01  8    ----------------------------------------------------------------------..............------  21
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10230  271  GACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  310
J  97.6% (41/42)    IGHJ4*02     9    ...................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_21093

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           431     4e-123
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCCTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	73	1	0	98.6
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	109	5	0	95.6
CDR3-IMGT (germline)	292	296	5	5	0	0	100
Total	N/A	N/A	292	284	8	0	97.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_10231  5    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCA  94
V  97.3% (284/292)  IGHV5-51*03  2    ....G.............................................................................C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_10231  95   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  184
V  97.3% (284/292)  IGHV5-51*03  92   G.........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_10231  185  GTCCGTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  97.3% (284/292)  IGHV5-51*03  182  .C..........................C....C....A..................A................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_10231  275  CCGCCATGTATTACTGTGCGAGGCCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  364
V  97.3% (284/292)  IGHV5-51*03  272  ......................--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (15/15)   IGHD6-19*01  4    --------------------------------------...............-------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   --------------------------------------------------------..................................  45

                                         
                                      S  
                    Query_10231  365  CAG  367
J  100.0% (37/37)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_137172

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHD6-13*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	ARHRYLGPRQQATENDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  Q  G  S  G  Y  T  F  S  T  Y
                    Query_10232  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTTCCACCTA  90
V  95.5% (278/291)  IGHV5-51*01  6    ..........................................G..................A...............G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  V  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_10232  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGTTGGGAGTCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ........G.....................................A....GA.......................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  A
                    Query_10232  181  GTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACCCCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  ......................A...........................................C..................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  Y  W  G  Q  G  T  L  V  T  A
                    Query_10232  271  CATGTATTACTGTGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCACCGC  360
V  95.5% (278/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-13*01  8    ---------------------------------------.......--------------------------------------------  14
J  97.6% (40/41)    IGHJ4*02     8    ---------------------------------------------------------................................T  40

                                              
                                        S  S  
                    Query_10232  361  CTCCTCAG  368
J  97.6% (40/41)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_240224

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10233  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_10233  91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_10233  181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_10233  271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_21097

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCCACGGGCTC	AGCAGTGGC	GATGACTCTGTTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCCACGGGCTCAGCAGTGGCGATGACTCTGTTTATGACTAC	VVHGLSSGDDSVYDY	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	241	1	1	0	0	100
Total	N/A	N/A	241	218	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  R  V  S  G  G  S  I  S  D  S  H  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_10234  1    ACCCTGTCCCTCACCTGCCGTGTCTCTGGTGGCTCCATCAGCGACAGTCACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.5% (218/241)  IGHV4-4*02   49   ..................GC......................AGT...A.........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  F  H  S  G  S  A  K  Y  N  P  S  L  Q  S  R  L  T  M  S  L  D  K  S  R 
                    Query_10234  91   GAGTGGATTGGGGAAGTTTTTCACAGTGGGAGCGCCAAGTACAACCCGTCCCTTCAGAGTCGACTCACCATGTCACTAGACAAGTCTAGG  180
V  90.5% (218/241)  IGHV4-4*02   139  ...............A.C.A...T.........A....C..............CA........G.......A...G..........C.A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  K  L  Q  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  H  G  L  S  S  G  D  D 
                    Query_10234  181  AACCAGTTCTCCCTGAAGCTGCAGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGTGGTCCACGGGCTCAGCAGTGGCGATGAC  270
V  90.5% (218/241)  IGHV4-4*02   229  .....................AGC.....................................-----------------------------  289
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  100.0% (9/9)     IGHD6-19*01  7    ---------------------------------------------------------------------------.........------  15

                                      -------------->                                  
                                       S  V  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10234  271  TCTGTTTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (41/41)   IGHJ4*02     8    --------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_169391

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           427     9e-122
IGHD2-21*01                                                                                           14.1    9.2   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGCATACA	ATTGTGG	ACCGGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCATACAATTGTGGACCGGGGACTAC	ARGGIQLWTGDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_10235  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTAT  91
V  97.2% (281/289)  IGHV1-18*01  7    ..........................................................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  L  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  V  S  T  Y  I  G  N  T  N  Y  A  Q 
                    Query_10235  92   GGTCTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGGTCAGCACTTACATTGGTAACACAAACTATGCACAG  181
V  97.2% (281/289)  IGHV1-18*01  97   ...A..................................................A.....G......A......................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  L  E  L  K  S  L  R  S  D  D  T  A 
                    Query_10235  182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACTTGGAGCTGAAGAGCCTGAGATCTGACGACACGGCC  271
V  97.2% (281/289)  IGHV1-18*01  187  ...C..................................................A.........G.........................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  G  G  I  Q  L  W  T  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10235  272  GTCTATTACTGTGCGAGAGGGGGCATACAATTGTGGACCGGGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  97.2% (281/289)  IGHV1-18*01  277  ..G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (7/7)     IGHD2-21*01  6    -----------------------------.......----------------------------------------------  12
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_129926

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           299     2e-83
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GGGCCAGAGA	AGTAGGACC	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGAGGGCCAGAGAAGTAGGACCCTTGACTAC	ATEGQRSRTLDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	247	219	28	0	88.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  N  Y  M  S  W  V  R  Q  A  P  G  M  G  L  
                    Query_10236  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAATAACTATATGAGTTGGGTCCGCCAGGCTCCAGGGATGGGGCTGG  90
V  88.7% (219/247)  IGHV3-53*01  47   ...............................G......G......GC.....C.....C......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  I  Y  S  G  G  G  S  F  Y  T  H  S  V  E  G  R  F  T  I  S  R  D  D  Y  K  
                    Query_10236  91   AGTGGGTCTCTCTTATTTACAGCGGTGGTGGCTCCTTCTACACACACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACGATTACAAGA  180
V  88.7% (219/247)  IGHV3-53*01  137  ..........AG.......T.........A..A.A.A....G..G........A..........................A...C.....  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  T  V  Y  L  Q  M  N  N  V  R  A  E  D  T  A  I  Y  Y  C  A  T  E  G  Q  R  S  R  T  L  
                    Query_10236  181  ACACGGTTTATCTTCAAATGAACAATGTTAGAGCCGAGGACACGGCCATATATTACTGTGCGACAGAGGGCCAGAGAAGTAGGACCCTTG  270
V  88.7% (219/247)  IGHV3-53*01  227  .....C.G................GCC.G..................G.G.............G...-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  88.9% (8/9)      IGHD2-2*01   11   -----------------------------------------------------------------------------.....T...----  19
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_10236  271  ACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  309
J  97.6% (41/42)    IGHJ4*02     10   ...........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_19798

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         386     1e-109
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCTTAAGGTCAATCCCGTC	CAGTGGCTGG	GCGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCTTAAGGTCAATCCCGTCCAGTGGCTGGGCGTCA	ARHPLRSIPSSGWAS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_10237    1    GCAGCTGGTGCAGTCTGGAGGAGAGGTGAAGAAGCCCGGGGAGTCTTTGAGGATTTCCTGTAAGGCTTCTGGATACACCTTTACCAACTA  90
V  92.7% (268/289)  IGHV5-10-1*01  6    ....................C.........A...............C.......C..........G...........G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  R  Y  S  P
                    Query_10237    91   CTGGATCAGCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGACCCTAGTGACTCTTATACCCGCTACAGTCC  180
V  92.7% (268/289)  IGHV5-10-1*01  96   ......................A.....................................T..................AA......C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  D  G  N  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  M  A  S  D  T  A
                    Query_10237    181  GTCCTTCGACGGCAACGTCACCATCTCAGTTGACAAGTCCATCAGTACTGCCTATTTGCAGTGGAGCAGCCTGATGGCCTCGGACACCGC  270
V  92.7% (268/289)  IGHV5-10-1*01  186  .......C.A...C...............C...............C........CC..................A...............  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          M  Y  Y  C  A  R  H  P  L  R  S  I  P  S  S  G  W  A  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_10237    271  CATGTATTATTGTGCGAGACATCCCTTAAGGTCAATCCCGTCCAGTGGCTGGGCGTCATGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  92.7% (268/289)  IGHV5-10-1*01  276  .........C.........-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD6-19*01    9    ------------------------------------------..........--------------------------------------  18
J  100.0% (34/34)   IGHJ4*02       15   ----------------------------------------------------------................................  46

                                          
                                          
                    Query_10237    361  AG  362
J  100.0% (34/34)   IGHJ4*02       47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_19799

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            315     5e-88
IGHD3-3*01                                                                                            25.7    0.003
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCGTCTCGG	GTATTCCGATGCTTGGACTGGTTAT	CCTTAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCGTCTCGGGTATTCCGATGCTTGGACTGGTTATCCTTATTACTTTGACTAC	ARVRLGYSDAWTGYPYYFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	225	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  M  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10238  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTTATGAGTTATTGGATGAGTTGGGTCCGTCAGGCTCCGGGGAAGGGGCTGG  90
V  90.4% (225/249)  IGHV3-7*01   47   .....................................C....GT..C...........C........C........A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  K  R  D  G  S  E  I  Y  Y  V  E  S  V  R  G  R  V  T  I  T  R  D  N  A  
                    Query_10238  91   AGTGGGTGGCCAGCATAAAACGAGATGGAAGTGAGATATACTATGTGGAGTCTGTGAGGGGCCGCGTCACCATCACCAGAGACAACGCCA  180
V  90.4% (225/249)  IGHV3-7*01   137  ............A......G.A..............A............C.......A......AT........T...............  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  S  S  V  F  L  Q  M  Y  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  R  L  G  Y  S  D  
                    Query_10238  181  AGAGCTCAGTGTTTCTGCAAATGTACAGCCTGAGAGCCGAAGACACAGCTGTATACTACTGTGCGAGAGTTCGTCTCGGGTATTCCGATG  270
V  90.4% (225/249)  IGHV3-7*01   227  ...A....C...A..........A................G.....G.....G..T.............---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.0% (21/25)    IGHD3-3*01   1    -------------------------------------------------------------------------------.....A....T  11

                                      R3-IMGT------------------------>                                  
                                      A  W  T  G  Y  P  Y  Y  F  D  Y  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_10238  271  CTTGGACTGGTTATCCTTATTACTTTGACTACTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  336
D  84.0% (21/25)    IGHD3-3*01   12   T.....G.......----------------------------------------------------  25
J  97.8% (45/46)    IGHJ4*02     3    --------------------.................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_169390

Length=414
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           414     6e-118
IGHD6-13*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              73.7    3e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCCCCCCCCCGCCCTGGGTGT	GTATAGCAGCAGCTGGT	CCCTAACTCCGTTGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGTACAGATCCCCCCCCCGCCCTGGGTGTGTATAGCAGCAGCTGGTCCCTAACTCCGTTGTCTGACTCC	STDPPPALGVYSSSWSLTPLSDS	290	358	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	175	30	25	5	0	83.3
FR3-IMGT	176	289	114	111	3	0	97.4
CDR3-IMGT (germline)	290	297	8	6	2	0	75
Total	N/A	N/A	297	281	16	0	94.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  A
                    Query_10239  1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGGTGAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAGCCTCTGGGTTCACTTTCAGAAACGC  90
V  94.6% (281/297)  IGHV3-15*01  6    ..........G.......G...........A.........................................A...........T.....  95
                                        Q  L  V  E  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A

                                      ---><--------------------FR2-IMGT---------------------><----------CDR2-IMGT---------><----
                                        W  M  R  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  Q  S  K  G  D  G  G  T  T  D  Y
                    Query_10239  91   CTGGATGAGGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTCAAAGTAAAGGTGACGGTGGGACAACAGACTA  180
V  94.6% (281/297)  IGHV3-15*01  96   .........C................................................A....C...AC...T.................  185
                                        W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y

                                      ------------------------------------------------FR3-IMGT----------------------------------
                                        A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  I  L  H  L  Q  M  N  S  L  K  T  E  D
                    Query_10239  181  CGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACATTCTGCATCTGCAAATGAACAGCCTGAAAACCGAGGA  270
V  94.6% (281/297)  IGHV3-15*01  186  .....................................................CG...T...............................  275
                                        A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D

                                      ------------------><-----------------------------CDR3-IMGT----------------------------->  
                                        T  A  V  Y  Y  C  S  T  D  P  P  P  A  L  G  V  Y  S  S  S  W  S  L  T  P  L  S  D  S  W
                    Query_10239  271  CACAGCCGTGTATTACTGTAGTACAGATCCCCCCCCCGCCCTGGGTGTGTATAGCAGCAGCTGGTCCCTAACTCCGTTGTCTGACTCCTG  360
V  94.6% (281/297)  IGHV3-15*01  276  ....................CC.....---------------------------------------------------------------  302
                                        T  A  V  Y  Y  C  T  T                                                                  
D  100.0% (17/17)   IGHD6-13*01  3    ------------------------------------------------.................-------------------------  19
J  97.6% (40/41)    IGHJ4*02     8    ---------------------------------------------------------------------------------.....A...  16

                                                                      
                                        G  Q  G  T  L  V  T  V  S  S  
                    Query_10239  361  GGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  392
J  97.6% (40/41)    IGHJ4*02     17   ................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40604112


Query= Query_19794

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           377     1e-106
IGHD3-10*01                                                                                           14.1    9.4   
IGHJ5*01                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CCCAA	ATTACTTGGGTTC	CCAGCCATTTGC	CTCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACACCCAAATTACTTGGGTTCCCAGCCATTTGCCTCC	ARHPNYLGSQPFAS	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	266	25	0	91.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  H  S  F  I  G  H
                    Query_10240  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCCGGACACAGTTTTATCGGCCA  90
V  91.4% (266/291)  IGHV5-51*01  6    ....................................C................................T...T....C....C.A..T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  M  I  Y  F  D  D  S  D  T  R  Y  S  P
                    Query_10240  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGAAAAGGCCTGGAGTGGATGGGGATGATATATTTTGACGACTCTGATACAAGATACAGTCC  180
V  91.4% (266/291)  IGHV5-51*01  96   ..............................G.......................C..C...CC..GT...........C........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  V  Y  L  Q  W  S  S  L  R  A  S  D  T  A
                    Query_10240  181  GTCCTTCGAGGGCCAGGTCACCATCTCCGCCGACAAGTCCATCAGTACCGTCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACACTGC  270
V  91.4% (266/291)  IGHV5-51*01  186  .......C.A.................A.................C....C.......................A............C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  F  C  A  R  H  P  N  Y  L  G  S  Q  P  F  A  S  W  G  H  G  T  L  V  T  V  S  S  
                    Query_10240  271  CATGTATTTCTGTGCCAGACACCCAAATTACTTGGGTTCCCAGCCATTTGCCTCCTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  359
V  91.4% (266/291)  IGHV5-51*01  276  ........A......G.....--------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                       
D  84.6% (11/13)    IGHD3-10*01  3    --------------------------......AT.....--------------------------------------------------  15
J  97.4% (37/38)    IGHJ5*01     14   ---------------------------------------------------............A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_19795

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           402     3e-114
IGHD3-9*01                                                                                            23.8    0.012 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTTTAAG	CGATATTTTGAC	CGGGGAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTAAGCGATATTTTGACCGGGGAGACTTTGACTTG	ARHFKRYFDRGDFDL	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	274	17	0	94.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  R  Y
                    Query_10241  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACAGCTTTACTAGATA  90
V  94.2% (274/291)  IGHV5-51*01  6    .............................................................A......................C..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  A  R  Q  M  S  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  V  K  Y  N  P
                    Query_10241  91   TTGGATCGGCTGGGCGCGCCAGATGTCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATGTTAAATACAACCC  180
V  94.2% (274/291)  IGHV5-51*01  96   C.............T..........C.......................................G..........ACC.G.....G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  L  S  A  D  K  S  I  S  T  A  Y  L  Q  W  N  R  L  K  A  S  D  T  A
                    Query_10241  181  GTCCTTCCAAGGCCAGGTCACCCTTTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAACAGGCTGAAGGCCTCGGACACCGC  270
V  94.2% (274/291)  IGHV5-51*01  186  ......................A.C........................................G...C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  A  R  H  F  K  R  Y  F  D  R  G  D  F  D  L  W  G  Q  G  T  L  V  T  V  S  S
                    Query_10241  271  CATATATTACTGTGCGAGACATTTTAAGCGATATTTTGACCGGGGAGACTTTGACTTGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  94.2% (274/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD3-9*01   7    ----------------------------............--------------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------------.........AC................................  46

                                        
                                        
                    Query_10241  361  AG  362
J  95.6% (43/45)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_19796

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         385     4e-109
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ATGGGCGCAGATGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGCGCAGATGGTGCTTTTGATATC	ARMGADGAFDI	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	247	1	0	99.6


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10242    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  99.6% (247/248)  IGHV3-30-3*01  47   ..........................................................................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  S  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10242    91   AGTGGGTGTCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  99.6% (247/248)  IGHV3-30-3*01  137  ........G.................................................................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  M  G  A  D  G  A  F  
                    Query_10242    181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAATGGGCGCAGATGGTGCTTTTG  270
V  99.6% (247/248)  IGHV3-30-3*01  227  ....................................................................----------------------  294
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  97.9% (46/47)    IGHJ3*02       4    ----------------------------------------------------------------------------------........  11

                                        ---->                                  
                                        D  I  W  G  Q  G  P  M  V  T  V  S  S  
                    Query_10242    271  ATATCTGGGGCCAAGGGCCAATGGTCACCGTCTCTTCAG  309
J  97.9% (46/47)    IGHJ3*02       12   .................A.....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_19791

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           321     6e-90
IGHD6-25*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD6-25*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GG	GCGGCTA	TTGCATTATGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCGGCTATTGCATTATGGTGGTTCGACCCC	ARGAAIALWWFDP	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  V  S  G  F  T  F  S  D  F  Y  M  S  W  V  R  Q  T  P  G  K  G  L  
                    Query_10243  1    GGTCCCTGAGACTCTCCTGTGAAGTCTCTGGATTCACCTTCAGTGACTTCTACATGAGTTGGGTCCGCCAGACTCCAGGGAAGGGGCTAG  90
V  91.2% (227/249)  IGHV3-11*01  47   .....................C..C.......................A.........C...A........G................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  F  I  S  A  S  G  H  D  I  S  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10243  91   AGTGGCTTTCATTCATTAGTGCTAGTGGACATGACATCTCCTACGCAGAGTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  91.2% (227/249)  IGHV3-11*01  137  .....G......A.......AG......TAG.AC...A.A.........C........................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  R  G  A  A  I  A  L  W  
                    Query_10243  181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCCGTGTATTATTGTGCGAGAGGGGCGGCTATTGCATTATGGT  270
V  91.2% (227/249)  IGHV3-11*01  227  ....C...............................C.....................C..........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-25*01  11   -----------------------------------------------------------------------.......------------  17
J  93.5% (43/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------------.  6

                                      ---------->                                  
                                      W  F  D  P  W  S  Q  G  T  Q  V  T  V  S  S  
                    Query_10243  271  GGTTCGACCCCTGGAGCCAGGGAACGCAGGTCACCGTCTCCTCAG  315
J  93.5% (43/46)    IGHJ5*02     7    ..............G..........C.T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_19793

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           329     3e-92
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTAGGATCCCGAAAAATCT	CTATGATAATAGTGGTTACTACT	TTTTCGCCTTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAGGATCCCGAAAAATCTCTATGATAATAGTGGTTACTACTTTTTCGCCTTTTTTGAATCC	ARLRIPKNLYDNSGYYFFAFFES	244	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  V  S  S  N  N  F  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_10244  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCGTCTCCAGTAATAATTTCTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  92.0% (230/250)  IGHV4-39*01  49   ...................C................A..AG.....G..G..A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  A  D  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  L  V  D  T  S 
                    Query_10244  91   CTGGAGTGGATTGGGAGTGCCGATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTTGGTGGACACGTCC  180
V  92.0% (230/250)  IGHV4-39*01  139  ..................AT.T....T...............................................A.CC..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       R  D  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  R  I  P  K  N  L 
                    Query_10244  181  AGGGACCAGTTCTCCCTAAAGTTGAGCTCTGTGACCGCCGCAGACACGGCTCTGTATTACTGTGCGAGACTTAGGATCCCGAAAAATCTC  270
V  92.0% (230/250)  IGHV4-39*01  229  .A.A.............G...C.............................G..................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.3% (21/23)    IGHD3-22*01  7    -----------------------------------------------------------------------------------------.  7

                                      ---CDR3-IMGT----------------------------->                                  
                                       Y  D  N  S  G  Y  Y  F  F  A  F  F  E  S  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_10244  271  TATGATAATAGTGGTTACTACTTTTTCGCCTTTTTTGAATCCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  346
D  91.3% (21/23)    IGHD3-22*01  8    .......G.........T....------------------------------------------------------  29
J  93.0% (40/43)    IGHJ4*02     6    ---------------------------------.....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_172265

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10245  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ........................................G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_10245  91   TGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ........G...A..T...............................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y 
                    Query_10245  181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............C....C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10245  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_172264

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     2e-91
IGHD3-16*01                                                                                           10.3    115  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GCAGAG	ATGAT	N/A	TACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCAGAGATGATTACCTTGACTCC	ASRDDYLDS	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  S  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10246  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTCTGCCATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.3% (227/246)  IGHV3-23*01  47   ................................................A........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  N  G  R  G  S  R  T  D  Y  A  Y  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10246  91   AGTGGGTCTCCAGTGTTAATGGTAGGGGTTCTAGGACGGACTACGCATACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.3% (227/246)  IGHV3-23*01  137  ..........AGC.A...G......T...GG...C..AT........G..........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  T  L  Y  L  E  M  S  S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  R  D  D  Y  L  D  S  
                    Query_10246  181  AGAACACGCTGTATCTGGAAATGAGCAGCCTGAGAGTCGAGGACACGGCCGTATATTATTGTGCGAGCAGAGATGATTACCTTGACTCCT  270
V  92.3% (227/246)  IGHV3-23*01  227  .................C......A...........C.....................C.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD3-16*01  6    ------------------------------------------------------------------------.....-------------  10
J  93.5% (43/46)    IGHJ4*02     3    -----------------------------------------------------------------------------...T......A..  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10246  271  GGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  303
J  93.5% (43/46)    IGHJ4*02     16   ............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_169392

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_10247  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_10247  91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_10247  181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  90.0% (45/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  I  P  V  T  V  S  S 
                    Query_10247  271  GCCGTCTGGGGCCAAGGGATCCCGGTCACCGTCTCGTCA  309
J  90.0% (45/50)    IGHJ6*02     24   .A.................C.A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_172261

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	ATTTAGAATATCAGTTTTCACTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATTTAGAATATCAGTTTTCACTTACTACTTTGACTAC	AREFRISVFTYYFDY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  A  S  I  K  N  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_10248  4    CCCTGAGACTCTCCTGTAGCGTCTCTGGTGCCTCCATCAAAAATTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  91.4% (223/244)  IGHV4-59*01  50   .....TCC...A....C.CT..........G........GT.G..A............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  E  D  T  S  K  N  
                    Query_10248  94   GGATTGGGTATATCTACTACAGTGGGAGCACCAACTATAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGAAGACACGTCCAAGAACC  183
V  91.4% (223/244)  IGHV4-59*01  140  ................T....................C..................................T.................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  E  F  R  I  S  V  F  T  Y  
                    Query_10248  184  AGTTCTCCCTGAAACTGACTTCTGTGACCGCTGCGGACACGGCCATTTATTATTGTGCGAGAGAATTTAGAATATCAGTTTTCACTTACT  273
V  91.4% (223/244)  IGHV4-59*01  230  .............G....GC........................G.G.....C...........--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  97.9% (47/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  F  D  Y  W  S  Q  G  T  L  V  T  V  S  S  
                    Query_10248  274  ACTTTGACTACTGGAGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.9% (47/48)    IGHJ4*02     4    ..............G..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_188323

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD6-13*01                                                                                           14.1    8.4  
IGHJ5*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	CCCCCTTAGGAGCCC	CTGGTAC	CTTCCCCGGGATGGT	CCCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGACCCCCTTAGGAGCCCCTGGTACCTTCCCCGGGATGGTCCCC	VTPLGAPGTFPGMVP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	235	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10249  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.5% (235/246)  IGHV3-23*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  F  S  G  S  G  G  D  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_10249  91   AGTGGGTCTCACTTTTTAGTGGTAGTGGTGGTGACACATACTACGCAGACTCCGTGAGGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.5% (235/246)  IGHV3-23*01  137  ...........GC.A.................AG.......................A................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  F  Y  C  V  T  P  L  G  A  P  G  T  
                    Query_10249  181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTTTTACTGTGTGACCCCCTTAGGAGCCCCTGGTACCT  270
V  95.5% (235/246)  IGHV3-23*01  227  ..............C.....................................A.A........C..------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD6-13*01  15   ---------------------------------------------------------------------------------.......--  21

                                      ---------------->                                  
                                      F  P  G  M  V  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10249  271  TCCCCGGGATGGTCCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  321
J  97.4% (37/38)    IGHJ5*02     14   -------------................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_172263

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           349     3e-98
IGHD2-15*01                                                                                           39.1    3e-07
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	T	GGATATTGTCGTGGTGGTGCCTGCTACTC	AACGGGTCGGGGGACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGATATTGTCGTGGTGGTGCCTGCTACTCAACGGGTCGGGGGACTTTTGACTAC	ARHGYCRGGACYSTGRGTFDY	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  S  T  H  H  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_10250  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGACTCCATCAGCAGCAGTACTCACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.4% (237/251)  IGHV4-39*01  49   .............................T.G............T....G.T..T...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  V  Y  Y  S  G  R  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10250  91   CTGGAGTGGATTGGGAGTGTCTATTATAGTGGGAGAACCTACGACAACCCGTCTCTCAAGAGTCGAGTCACCATATCTGTCGACACGTCC  180
V  94.4% (237/251)  IGHV4-39*01  139  ..................A................C......T..........C.......................C..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  H  G  Y  C  R  G  G 
                    Query_10250  181  AAGAATCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTTTTACTGTGCGAGACATGGATATTGTCGTGGTGGT  270
V  94.4% (237/251)  IGHV4-39*01  229  .....C.................................................A...............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.7% (26/29)    IGHD2-15*01  2    ------------------------------------------------------------------------.........A........  19

                                      CDR3-IMGT-------------------------->                                  
                                       A  C  Y  S  T  G  R  G  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10250  271  GCCTGCTACTCAACGGGTCGGGGGACTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  89.7% (26/29)    IGHD2-15*01  20   AG.........-----------------------------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_172262

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           338     4e-95
IGHD2-21*01                                                                                           10.3    117  
IGHJ2*01                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-21*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	TA	GGTGA	AGCCCAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGTAGGTGAAGCCCAGTACTGGTACTTCGATCTC	AGVGEAQYWYFDL	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	230	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10251  1    ACCCTGTCCCTCACCTGCAGTGTTTCTGGTGACTCAATCAGTGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.3% (230/244)  IGHV4-59*01  49   ...................C...C.......G...C......A...A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  T  S  E  N 
                    Query_10251  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTCGACACGTCCGAGAAC  180
V  94.3% (230/244)  IGHV4-59*01  139  .................................A.............................A..........A.........A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       K  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  V  G  E  A  Q  Y  W  Y  F 
                    Query_10251  181  AAGTTTTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGGGAGTAGGTGAAGCCCAGTACTGGTACTTC  270
V  94.3% (230/244)  IGHV4-59*01  229  C....C.............G........................................A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*01  14   ------------------------------------------------------------------.....-------------------  18
J  98.1% (51/52)    IGHJ2*01     2    ------------------------------------------------------------------------------............  13

                                      ----->                                  
                                       D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10251  271  GATCTCTGGGGCCGTGGCACCCTTGTCACTGTCTCCTCAG  310
J  98.1% (51/52)    IGHJ2*01     14   .......................G................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_169395

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            330     1e-92
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAG	C	TTATGACTACG	AAGACAGCGCCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGCTTATGACTACGAAGACAGCGCCCCTGACTAC	AKAYDYEDSAPDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10252  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAGTAGTTATTGGATGACCTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-7*03   47   .....................C........................C..........G...............T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  G  V  A  N  I  K  Q  D  G  S  G  T  H  Y  L  D  S  L  G  G  R  F  T  I  S  R  D  N  A  
                    Query_10252  91   AGGGGGTGGCCAACATAAAACAAGATGGAAGTGGGACACACTATCTGGACTCTCTGGGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (230/249)  IGHV3-7*03   137  ..T................G.............A..A.T.....G........G..AA................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  S  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  A  Y  D  Y  E  D  S  
                    Query_10252  181  AGAGCTCAGTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCCAAAGCTTATGACTACGAAGACAGCG  270
V  92.4% (230/249)  IGHV3-7*03   227  ...A....C.........................................G.G...........G.G..---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD3-16*01  4    ----------------------------------------------------------------------......T....---------  14

                                      ---------->                                  
                                      A  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10252  271  CCCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (41/41)   IGHJ4*02     8    ----.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_188322

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10253  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10253  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_10253  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10253  271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_172269

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           10.3    131   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_10254  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  95.2% (276/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  F  A  Q 
                    Query_10254  92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTTTGCACAG  181
V  95.2% (276/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10254  182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10254  272  ATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  95.2% (276/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_172268

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           316     2e-88
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	222	20	0	91.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_10255  4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAGT  93
V  91.7% (222/242)  IGHV4-34*01  50   .....TCC...A...................G...T..................G...........................G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  I  S  L  D  M  S  K  N  
                    Query_10255  94   GGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGAGTCTCCATTTCATTAGACATGTCCAAGAACC  183
V  91.7% (222/242)  IGHV4-34*01  140  ............................C..................C..A...........A....A...G......C...........  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  V  K  M  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y  
                    Query_10255  184  AGTTCTCCGTGAAGATGACGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAACCGTAAAGGGGGTTATTACTGTCTACC  273
V  91.7% (222/242)  IGHV4-34*01  230  ........C.....C...GC..........................G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD3-22*01  20   -------------------------------------------------------------------------..........-------  29

                                      ------------------->                                 
                                      Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10255  274  AGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (40/40)   IGHJ6*02     23   -------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_169394

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_10256  1    GCAGCTGGTGCAGTCTGGAGCGGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    .....................A.......A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_10256  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  R  A  S  D  T  A
                    Query_10256  181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAGGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .......C.....................................C...........G......A.........A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_10256  271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_10256  361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_98920

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           291     5e-81
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTGG	AGCAGTGGCTGGT	CGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTGGAGCAGTGGCTGGTCGGTTTGACTTC	AREGGAVAGRFDF	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	16	5	0	76.2
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  R  G  S  V  S  S  G  G  Y  H  W  S  W  I  R  Q  T  P  G  R  G  
                    Query_10257  4    CCCTGAGACTCTCCTGTTCTGTCTCTCGTGGCTCCGTCAGCAGTGGGGGTTATCACTGGTCCTGGATCCGGCAGACCCCAGGCAGGGGAC  93
V  87.2% (218/250)  IGHV4-61*08  50   .....TCC...A....CA........G...................T.....CT.....AG.............C.......G.A.....  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  H  F  T  G  T  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  A  D  M  S  
                    Query_10257  94   TGGAGTGGATTGGCTATATCCACTTCACTGGGACCACCAAGTACAACCCCTCCCTTAAGAGTCGAGTCAGCATATCAGCAGACATGTCCA  183
V  87.2% (218/250)  IGHV4-61*08  140  .............G......T.T.A..G.....G......C..............C.............C........T.....C.....  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  A  V  A  G  
                    Query_10257  184  AGAACCAATTCTCCCTGAACCTGAGGTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTGCGAGAGAGGGTGGAGCAGTGGCTGGTC  273
V  87.2% (218/250)  IGHV4-61*08  230  .......G...........G.....C..........................G..T..C...........--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD6-19*01  7    ----------------------------------------------------------------------------.............-  19

                                      ---------->                                  
                                      R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10257  274  GGTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (42/43)    IGHJ4*02     6    --.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_129927

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ3*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCGTCCGGGT	TTACTATGATAGTAG	GGGG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCGTCCGGGTTTACTATGATAGTAGGGGGGATGCTTTTGATATC	AKVVRVYYDSRGDAFDI	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  P  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10258  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTATCCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-23*01  47   .............................................G....G......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  S  I  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10258  91   AGTGGGTCTCATCTATTAGTGGTAGTGGTGCCAGTATATCTTACGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (231/249)  IGHV3-23*01  137  ...........G..................GT..C.C..AC.......................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  I  L  Y  L  Q  M  A  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  V  V  R  V  Y  Y  D  
                    Query_10258  181  AGAATATACTGTATCTGCAAATGGCCAGCCTGAGAGCCGAAGACACGGCCCTATATTACTGTGCGAAAGTCGTCCGGGTTTACTATGATA  270
V  92.8% (231/249)  IGHV3-23*01  227  ....C.CG...............AA...............G.........G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD3-22*01  4    -------------------------------------------------------------------------------...........  14

                                      GT-------------------->                                  
                                      S  R  G  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10258  271  GTAGGGGGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  327
D  100.0% (15/15)   IGHD3-22*01  15   ....-----------------------------------------------------  18
J  100.0% (49/49)   IGHJ3*02     2    --------.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_98922

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           389     2e-110
IGHD4-17*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCTAGAGGG	GACTACGGTG	GTAACTCCCTGGGGGTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCTAGAGGGGACTACGGTGGTAACTCCCTGGGGGTATGACTAC	ARALEGTTVVTPWGYDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	249	0	0	100


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                     Query_10259  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  100.0% (249/249)  IGHV3-48*03  47   ..........................................................................................  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                     Query_10259  91   AGTGGGTTTCATACATTAGTAGTAGTGGTAGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  100.0% (249/249)  IGHV3-48*03  137  ..........................................................................................  226
                                       E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                       -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  L  E  G  T  T  V  
                     Query_10259  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGCCCTAGAGGGGACTACGGTGG  270
V  100.0% (249/249)  IGHV3-48*03  227  .....................................................................---------------------  295
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)    IGHD4-17*01  2    -------------------------------------------------------------------------------..........-  11

                                       GT-------------------->                                  
                                       V  T  P  W  G  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_10259  271  TAACTCCCTGGGGGTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (41/41)    IGHJ4*02     8    ----------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_98923

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           318     5e-89
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_10260  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_10260  91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.4% (224/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_10260  181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCAAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.4% (224/245)  IGHV4-59*02  229  ...........G.A.................................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_10260  271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_98924

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD2-15*01                                                                                           21.8    0.041
IGHJ3*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGG	GGATATAGTAGTGG	CTGCTGCCACCGTTC	TTGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGGGATATAGTAGTGGCTGCTGCCACCGTTCTTGCTGTC	ARDQGDIVVAAATVLAV	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  M  S  G  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_10261  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATGAGTGGTTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  91.4% (223/244)  IGHV4-59*01  50   .....TCC...A....C....................C...A...A......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  H  I  F  Y  S  E  S  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  A  S  K  K  
                    Query_10261  94   GGATTGGGCATATCTTTTACAGTGAGAGTACCAGCTATAACCCCTCCCTCAAGAGTCGAGTCACTATATCAGTAGACGCGTCCAAGAAGC  183
V  91.4% (223/244)  IGHV4-59*01  140  ........T......A........G...C....A...C..........................C............A..........C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  G  D  I  V  V  A  A  
                    Query_10261  184  AGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATCAGGGGGATATAGTAGTGGCTGCTG  273
V  91.4% (223/244)  IGHV4-59*01  230  ..................GC..........................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  92.9% (13/14)    IGHD2-15*01  2    ----------------------------------------------------------------------......T.......------  15

                                      ---------------->                                  
                                      A  T  V  L  A  V  W  G  Q  G  T  K  V  T  V  S  S  
                    Query_10261  274  CCACCGTTCTTGCTGTCTGGGGCCAAGGGACAAAGGTCACCGTCTCTTCAG  324
J  95.2% (40/42)    IGHJ3*01     9    ---------...A....................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_125570

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           290     2e-80
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	22	2	6	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	220	25	6	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_10262  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGCCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  87.6% (220/251)  IGHV4-34*01  49   .......................C..T......T.....------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  R  S  R  V  T  I  S  V  D  T  S 
                    Query_10262  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCGGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  87.6% (220/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......AA...............A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_10262  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  87.6% (220/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_10262  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_98927

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           310     1e-86
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGGGTATGA	ATTACTAC	CGGCTGCCAGTAATATA	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGGGTATGAATTACTACCGGCTGCCAGTAATATAATGGACGCC	ARVGYELLPAASNIMDA	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  F  R  G  Y  L  W  S  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_10263  1    ACCCTGTCCCTCACCTGCGCTGTATCTGGTGGGTCCTTCAGAGGTTACCTCTGGAGTTGGATCCGCCAGGCCCCAGGGAAGGGGCTGGAG  90
V  90.6% (221/244)  IGHV4-34*01  49   .......................C.A...............T......TA......C............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  T  N  H  R  G  S  T  N  Y  N  P  S  L  K  S  R  V  V  I  S  V  G  T  S  K  N 
                    Query_10263  91   TGGATTGGGGAAACCAATCATAGAGGATCCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCGTCATCTCAGTTGGCACGTCCAAAAAC  180
V  90.6% (221/244)  IGHV4-34*01  139  .............T.........T...AG..................................AC...A.....A.A.........G...  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  G  Y  E  L  L  P  A  A 
                    Query_10263  181  CAGTTCTCCTTGAGGCTGACCTCAGTGACCGCCGCGGACACGGCTGTCTATTATTGTGCGAGAGTGGGGTATGAATTACTACCGGCTGCC  270
V  90.6% (221/244)  IGHV4-34*01  229  .........C...A.....G...T.......................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-22*01  24   --------------------------------------------------------------------------........--------  31

                                      ----------------->                                 
                                       S  N  I  M  D  A  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10263  271  AGTAATATAATGGACGCCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  321
J  97.6% (41/42)    IGHJ6*02     21   ---------.......T..................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_98928

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD6-19*01                                                                                           21.8    0.041
IGHJ5*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTCCCGC	GTATAGTAGTGGCT	ACGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTCCCGCGTATAGTAGTGGCTACGGCTGGTTCGGCTCC	ARDSPAYSSGYGWFGS	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  N  T  Y  Y  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_10264  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAATACTTACTACTGGAGTTGGATCCGGCAGACCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   ......................................C.G..G............C............C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_10264  91   TGGATTGGTTATATCTATTACACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G.............G.....G...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  T  L  R  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  D  S  P  A  Y  S  S  G  Y 
                    Query_10264  181  CAGTTCTCCCTGACGCTGAGGTCTGTGAGCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGATTCTCCCGCGTATAGTAGTGGCTAC  270
V  94.3% (231/245)  IGHV4-59*01  229  .............A......C.......C..................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  3    --------------------------------------------------------------------------......C.......--  16

                                      -------------->                                  
                                       G  W  F  G  S  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_10264  271  GGCTGGTTCGGCTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  319
J  93.6% (44/47)    IGHJ5*01     5    --........A............A.....................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_98929

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    116  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_10265  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_10265  91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_10265  181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_10265  271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_169396

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10266  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01   49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_10266  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01   139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_10266  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01   229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01   13   ----------------------------------------------------------------------.....C..G...--------  24

                                      ----------->                                  
                                       G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_10266  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_125579

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           336     1e-94
IGHD1-26*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GGG	GGGAGCTACT	CTCCTTTT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGGGGGGAGCTACTCTCCTTTTTGCTTTTGATATC	VKGGATLLFAFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  M  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10267  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAATATGTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTAG  90
V  93.5% (231/247)  IGHV3-64*05  47   ..........................................G..GC.........................................G.  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  V  S  S  I  T  S  N  A  E  S  T  Y  Y  T  D  S  V  K  D  R  F  T  I  S  R  D  N  S  
                    Query_10267  91   AATCTGTCTCCTCTATTACTAGTAATGCGGAGAGCACATACTACACAGACTCAGTGAAGGACAGATTCACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-64*05  137  ...A...T..AG......G........G..GT............G...............G.............................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  G  G  A  T  L  L  F  
                    Query_10267  181  AGAACACGCTGTATCTTCAAATGAGCAGTCTGAGACCTGAGGACACGGCTGTGTATTACTGTGTGAAGGGGGGAGCTACTCTCCTTTTTG  270
V  93.5% (231/247)  IGHV3-64*05  227  ..............G....................G...............................-----------------------  293
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V                          
D  100.0% (10/10)   IGHD1-26*01  9    ----------------------------------------------------------------------..........----------  18
J  97.9% (46/47)    IGHJ3*02     4    ----------------------------------------------------------------------------------------..  5

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_10267  271  CTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  315
J  97.9% (46/47)    IGHJ3*02     6    ..........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_125578

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           402     3e-114
IGHD1-26*01                                                                                           18.0    0.70  
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCGAGACGTCCCCTTAC	AGTGGGAACTAC	AACAAAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCGAGACGTCCCCTTACAGTGGGAACTACAACAAAGTACTACCACTACGGTATAGACGTC	ARHPRRPLTVGTTTKYYHYGIDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	274	17	0	94.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  S  Y
                    Query_10268  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCCGGATACAGCTTTATTAGTTA  90
V  94.2% (274/291)  IGHV5-51*01  6    ....................................C................................T.............CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_10268  91   TTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCCGGTGACTCGGATACCAGATACAACCC  180
V  94.2% (274/291)  IGHV5-51*01  96   C........C.....................................................T........T.............G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  M  S  L  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  S  A
                    Query_10268  181  GTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACATGTCCCTCAGCACCGCCTACCTCCAGTGGAGCAGCCTGAAGGCCTCGGACAGCGC  270
V  94.2% (274/291)  IGHV5-51*01  186  .......C...................A.C.....A....A................G............................C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        M  Y  Y  C  A  R  H  P  R  R  P  L  T  V  G  T  T  T  K  Y  Y  H  Y  G  I  D  V  W  G  L
                    Query_10268  271  CATGTATTACTGTGCGAGACATCCGAGACGTCCCCTTACAGTGGGAACTACAACAAAGTACTACCACTACGGTATAGACGTCTGGGGCCT  360
V  94.2% (274/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD1-26*01  6    ---------------------------------------.......G....---------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------------------......T..........G.............A  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_10268  361  AGGGACCACGGTCACCGTCTCCTCA  385
J  94.7% (54/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_60928

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           413     2e-117
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCGTGTGAA	GGTTCGGGGAATTAT	CCCTTGGCAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCGTGTGAAGGTTCGGGGAATTATCCCTTGGCAGAC	AACEGSGNYPLAD	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	275	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  I  S  C  K  A  S  G  G  T  F  S  S  S
                    Query_10269  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAGGATCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTC  90
V  96.2% (275/286)  IGHV1-69*06  6    ..................G...............................A.G....................................A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  D  T  A  N  Y  A  Q
                    Query_10269  91   TGCTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGATACAGCAAATTACGCACA  180
V  96.2% (275/286)  IGHV1-69*06  96   ........G..............................................................G.........C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  D  Y  M  E  L  R  S  L  S  S  E  D  T  A
                    Query_10269  181  GAGGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGACTACATGGAGCTGCGCAGCCTGAGCTCTGAGGACACGGC  270
V  96.2% (275/286)  IGHV1-69*06  186  ..A...............................................C.............A..........A..............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  A  C  E  G  S  G  N  Y  P  L  A  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10269  271  CGTGTATTACTGTGCGGCGTGTGAAGGTTCGGGGAATTATCCCTTGGCAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  96.2% (275/286)  IGHV1-69*06  276  ................----------------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                       
D  93.3% (14/15)    IGHD3-10*01  11   -------------------------..........G....----------------------------------------------  25
J  100.0% (36/36)   IGHJ4*02     13   --------------------------------------------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_4209

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           383     1e-108
IGHD3-16*01                                                                                           14.1    9.5   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACAAGCGGGCGGCACC	TTTGGGG	CGAGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTAC	ARGQAGGTFGASDY	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	71	4	0	94.7
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	46	5	0	90.2
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	104	10	0	91.2
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	295	270	25	0	91.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  S  F  N 
                    Query_10270  4    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAATGAAGGTCTCCTGCAAGGCTTCCGGTTACAGCTTTAAC  93
V  91.5% (270/295)  IGHV1-18*01  1    ...G.T.............................................G......................T.......C.....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  G  I  T  W  M  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  A  Y  N  G  N  T  K  Y 
                    Query_10270  94   GACTATGGTATCACTTGGATGCGACAGGCCCCTGGACAGGGGCCTGAGTGGATGGGATGGATCAGCGCATATAATGGTAACACAAAGTAT  183
V  91.5% (270/295)  IGHV1-18*01  91   AG...........GC...G...................A....T........................T..C..............C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  E  R  L  Q  G  R  L  I  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_10270  184  TCAGAGAGGCTCCAGGGCAGACTCATCATGACCACAGACACATCCACGAGCACAGCCTACATGGAATTGAGGAGCCTGAGATCTGACGAC  273
V  91.5% (270/295)  IGHV1-18*01  181  G..C...A.............G...C.......................................GC.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  G  Q  A  G  G  T  F  G  A  S  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_10270  274  ACGGCCGTCTATTATTGTGCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  363
V  91.5% (270/295)  IGHV1-18*01  271  ........G.....C..........-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD3-16*01  15   ------------------------------------------.......-----------------------------------------  21
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------------------....................................  44

                                          
                                       S  
                    Query_10270  364  TCAG  367
J  100.0% (40/40)   IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_4207

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           363     1e-102
IGHD3-10*01                                                                                           10.3    119   
IGHJ3*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	ACGAGGACG	CGGGG	CTTCTCGAG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACGAGGACGCGGGGCTTCTCGAGGCTTTTGATATC	ANEDAGLLEAFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10271  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (239/246)  IGHV3-48*03  47   ....................................C.....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  A  G  S  P  I  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10271  91   AGTGGGTTTCATACATTAGTAGTGCTGGTAGTCCCATACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (239/246)  IGHV3-48*03  137  .......................AG.......A.....T...................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  N  E  D  A  G  L  L  E  
                    Query_10271  181  AGAACTCACTGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAACGAGGACGCGGGGCTTCTCGAGG  270
V  97.2% (239/246)  IGHV3-48*03  227  ...................A.............................T................------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD3-10*01  15   ---------------------------------------------------------------------------.....----------  19
J  100.0% (46/46)   IGHJ3*02     5    -----------------------------------------------------------------------------------------.  5

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10271  271  CTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  315
J  100.0% (46/46)   IGHJ3*02     6    .............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_167951

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            260     1e-71
IGHD3-10*01                                                                                           12.2    32   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCCGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCCGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHPATRGTRGFDS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	22	5	0	81.5
FR2-IMGT	57	107	51	48	3	0	94.1
CDR2-IMGT	108	128	21	14	7	0	66.7
FR3-IMGT	129	242	114	96	18	0	84.2
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	207	41	0	83.5


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_10272  1    GGTCCCTGAGACTCTCCTGTACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGC  90
V  83.5% (207/248)  IGHV4-4*01   47   ..A.....TCC...A....CG.........G...........G..GT.....C..........................A..........  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  S  M  S  V  D  K  S  
                    Query_10272  91   TGGAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCAGCATGTCAGTAGACAAGTCCA  180
V  83.5% (207/248)  IGHV4-4*01   137  ....G...........A.........A.T..GAG.AC.......AAC...T.....A............C...A................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  T  L  T  S  L  N  A  A  D  T  A  V  Y  F  C  A  G  H  P  A  T  R  G  T  
                    Query_10272  181  AGAATCAATTCTCCCTCACGCTGACGTCTCTGAACGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCCGGCGACACGTGGCACTC  270
V  83.5% (207/248)  IGHV4-4*01   227  ....C..G........G.A.....GC...G...C..................G....G...T...A..----------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01  14   ----------------------------------------------------------------------------------------..  15

                                      ------------->                                  
                                      R  G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_10272  271  GGGGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  318
D  100.0% (6/6)     IGHD3-10*01  16   ....--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    -----.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_60920

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHD5-12*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGCGGGA	TGGCTAC	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGACAGGTGCGGGATGGCTACCTGACTAC	VTGAGWLPDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	5	2	0	71.4
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  G  Y  Y  L  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10273  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTGGTTATTATTTGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*01  49   ......................................C...A....C..C.G..G.................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  L  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_10273  91   TGGCTTGGTTTGATCTCTTACAGCGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAACAAC  180
V  92.2% (225/244)  IGHV4-59*01  139  ...A....G.AT....A......T.....C........................................................G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  V  T  G  A  G  W  L  P  D  Y  W 
                    Query_10273  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCCTGTATTATTGTGTGACAGGTGCGGGATGGCTACCTGACTACTGG  270
V  92.2% (225/244)  IGHV4-59*01  229  .............................................G.......C....C..G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-12*01  11   ------------------------------------------------------------------------.......-----------  17
J  100.0% (41/41)   IGHJ4*02     8    --------------------------------------------------------------------------------..........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_10273  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (41/41)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_60927

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           324     8e-91
IGHD4-17*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCCCCCTCCTGTG	GGTGACTAC	GTCAGCGGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCCCCCTCCTGTGGGTGACTACGTCAGCGGCCTTGACTAT	AKPPPVGDYVSGLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  T  T  S  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10274  1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCATGTTCACCACCTCTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.9% (227/247)  IGHV3-30*18  47   ......................A.............CC....GT.G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10274  91   AGTGGGTGGCAGTCATCTCATATGATGGAAGTAATACGTACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGGGACAATTCCA  180
V  91.9% (227/247)  IGHV3-30*18  137  .............T..A...................AA.....T...................................A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  S  L  Q  M  S  S  L  R  P  E  D  S  G  V  Y  Y  C  A  K  P  P  P  V  G  D  Y  
                    Query_10274  181  AGAACACCCTGTCTCTGCAAATGAGCAGCCTGAGGCCTGAGGACTCGGGTGTGTATTACTGTGCGAAGCCCCCTCCTGTGGGTGACTACG  270
V  91.9% (227/247)  IGHV3-30*18  227  .......G....A...........A.........AG........A...C..................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD4-17*01  8    --------------------------------------------------------------------------------.........-  16

                                      ---------------->                                  
                                      V  S  G  L  D  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_10274  271  TCAGCGGCCTTGACTATTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  321
J  95.2% (40/42)    IGHJ4*02     7    ---------.......C................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_60926

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_10275  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAGT  93
V  93.9% (229/244)  IGHV4-59*01  50   .....TCC...A..................G........G....................................G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_10275  94   GGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  93.9% (229/244)  IGHV4-59*01  140  .......GT........T.......G................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G  
                    Query_10275  184  AGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGAC  273
V  93.9% (229/244)  IGHV4-59*01  230  ............A.....G.....................G.C.....................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  94.7% (18/19)    IGHD3-16*01  7    ----------------------------------------------------------------....T..............-------  25

                                      ->                                  
                                      H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10275  274  ACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  309
J  97.2% (35/36)    IGHJ4*02     13   ................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_4201

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         383     1e-108
IGHD3-16*01                                                                                           12.2    34    
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	ATTATG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATGACTACTTTGACTAC	ARHYDYFDY	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  R  G  F  G  Y  S  F  T  S  F
                    Query_10276    1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGTTTTGGATACAGCTTTACCAGCTT  90
V  92.4% (267/289)  IGHV5-10-1*01  6    ....................C.........................................A.....C....................A  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  V  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  F  D  S  S  T  D  Y  T  P
                    Query_10276    91   CTGGGTCACTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAGAATTGATCCTTTTGACTCTTCTACCGACTATACGCC  180
V  92.4% (267/289)  IGHV5-10-1*01  96   ....A...GC.........................................G..G.........AG........A....A....C.GC..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  N  S  I  S  T  A  Y  L  H  L  S  S  L  K  A  S  D  T  G
                    Query_10276    181  GTCATTCCAAGGCCACGTCACCATCTCAGCTGACAACTCCATCAGTACTGCCTACCTGCACTTGAGCAGCCTGAAGGCCTCGGACACCGG  270
V  92.4% (267/289)  IGHV5-10-1*01  186  ...C................................G........C..............G.G..........................C  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------CDR3-IMGT-------->                                  
                                          M  Y  Y  C  A  R  H  Y  D  Y  F  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10276    271  CATGTATTACTGTGCGAGACATTATGACTACTTTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  344
V  92.4% (267/289)  IGHV5-10-1*01  276  ...................-------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                        
D  100.0% (6/6)     IGHD3-16*01    3    --------------------......------------------------------------------------  8
J  97.9% (47/48)    IGHJ4*02       1    --------------------------.....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_255548

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           235     4e-64
IGHD3-10*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	CGCCTCAGCATGGAC	TGGTACGGGGAGT	CGAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGCCTCAGCATGGACTGGTACGGGGAGTCGACCTACTACTACTACGGCGTGGACGTC	ARLSMDWYGESTYYYYGVDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	39	12	0	76.5
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	91	23	0	79.8
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	195	45	0	81.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  M  N  R  H  Y  W  S  W  I  R  Q  S  P  G  G  G  L  E 
                    Query_10277  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGCGGCTCCATGAATAGGCACTATTGGAGTTGGATTCGACAGTCCCCGGGAGGGGGACTGGAG  90
V  81.2% (195/240)  IGHV4-59*08  49   ...................C.........T........C.G...TT....C.....C.....C..G...C....A..GAA..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  F  I  Y  Y  S  G  T  T  K  S  N  P  A  L  E  R  R  V  S  V  S  I  D  T  T  R  S 
                    Query_10277  91   TGGATTGCCTTCATCTACTACAGTGGGACTACCAAGTCCAATCCCGCCCTCGAGAGGCGCGTCTCCGTGTCAATAGACACGACCAGAAGT  180
V  81.2% (195/240)  IGHV4-59*08  139  .......GG.AT.....T..........GC.....C.A...C...T.....A....T..A...A..A.A...G........T...AG.AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  R  S  V  T  A  T  D  T  A  I  Y  Y  C  A  R  L  S  M  D  W  Y  G  E  S 
                    Query_10277  181  CAGTTCTCCCTGAAATTGAGGTCTGTGACCGCCACAGACACGGCCATCTATTACTGCGCGCGCCTCAGCATGGACTGGTACGGGGAGTCG  270
V  81.2% (195/240)  IGHV4-59*08  229  ..............GC....C............G...........G.G........T...------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  92.3% (12/13)    IGHD3-10*01  10   ---------------------------------------------------------------------------....T........--  22

                                      GT------------------------>                                 
                                       T  Y  Y  Y  Y  G  V  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_10277  271  ACCTACTACTACTACGGCGTGGACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  330
J  94.8% (55/58)    IGHJ6*02     5    --...............TA...............A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_255547

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*05                                                                                         294     6e-82
IGHD3-10*01                                                                                           12.2    31   
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*05	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	TGGTTC	TACGTGGCG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGTGGTTCTACGTGGCGACAACTGGTTCGACCTC	VRVVLRGDNWFDL	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  D  S  I  T  R  G  G  Y  S  W  S  W  I  R  Q  S  P  G  K  G 
                    Query_10278    1    ACCCTGTCCCTCACCTGCGCTGTGTCCGGTGACTCCATCACCAGGGGTGGTTACTCCTGGAGTTGGATCCGCCAGTCCCCAGGGAAGGGC  90
V  87.6% (219/250)  IGHV4-30-2*05  49   .......................C..T....G........G...T.................C........G...C.A............  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  A  N  I  Y  Y  S  G  K  T  N  F  N  P  S  L  K  S  R  L  T  I  S  L  D  A  S 
                    Query_10278    91   CTGGAGTGGATTGCGAACATCTATTATAGTGGGAAGACCAACTTCAATCCGTCCCTCAAGAGTCGACTTACCATATCACTAGACGCGTCC  180
V  87.6% (219/250)  IGHV4-30-2*05  139  .............G.T........C.........GC...T...A...C..................G...........G.....A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         E  N  Q  F  S  L  K  L  M  S  M  T  A  A  D  T  A  V  Y  Y  C  V  R  V  V  L  R  G  D  N 
                    Query_10278    181  GAGAACCAATTCTCTCTGAAACTTATGTCGATGACTGCCGCAGACACGGCCGTTTATTACTGTGTCAGAGTGGTTCTACGTGGCGACAAC  270
V  87.6% (219/250)  IGHV4-30-2*05  229  A.......G.....C.....G..G.GC..TG......................G..........C.....--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01    10   ----------------------------------------------------------------------......--------------  15
J  96.1% (49/51)    IGHJ5*02       1    -------------------------------------------------------------------------------------.....  5

                                        ----------->                                  
                                         W  F  D  L  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_10278    271  TGGTTCGACCTCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  316
J  96.1% (49/51)    IGHJ5*02       6    ..........C.................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_255544

Length=317
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         363     1e-102
IGHD5-12*01                                                                                           10.3    111   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	GTGGC	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGCGGCCTAC	ARVAAY	241	258	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	111	3	0	97.4
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  V  R  Q  S  P  G  K  G  L 
                    Query_10279    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCATCAGCAGTGGTTACTACTGGGGCTGGGTCCGGCAGTCCCCAGGGAAGGGGCTG  90
V  97.2% (239/246)  IGHV4-38-2*01  49   ...............................................................A........C.................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  I  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S  K 
                    Query_10279    91   GAGTGGATTGGGATTATCTACCATAGTGGGAGCACCTACTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTAGACACGTCCAAG  180
V  97.2% (239/246)  IGHV4-38-2*01  139  .............G......T...................................G.................................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----CDR3-IMGT--->            
                                         N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  A  A  Y  W  G  Q  G 
                    Query_10279    181  AACCAGTTCTCCCTGAAGCTGAACTCTGTTACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGTGGCGGCCTACTGGGGCCAGGGA  270
V  97.2% (239/246)  IGHV4-38-2*01  229  ......................G......G....................................------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (5/5)     IGHD5-12*01    10   ------------------------------------------------------------------.....-------------------  14
J  97.4% (37/38)    IGHJ4*02       11   --------------------------------------------------------------------------................  26

                                                              
                                         I  L  V  T  V  S  S  
                    Query_10279    271  ATCCTGGTCACCGTCTCCTCAG  292
J  97.4% (37/38)    IGHJ4*02       27   .C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30621390


Query= Query_255545

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            274     8e-76
IGHD1-26*01                                                                                           10.3    117  
IGHJ6*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACTTTCGCTTCGC	ACTAC	CTACATT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACTTTCGCTTCGCACTACCTACATTTGGACGTC	ARTFASHYLHLDV	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	53	27	20	4	3	74.1
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	247	213	31	3	86.2


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  G  S  I  T     N  Q  W  W  T  W  V  R  Q  P  P  G  R  G  
                    Query_10280  1    GGTCCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATCAC---TAATCAGTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAGGGGGC  87
V  86.2% (213/247)  IGHV4-4*01   47   ..A.....TCC...A....C......................GCAG..G.A.C.......G.......................A.....  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  F  P  N  G  N  T  N  Y  S  P  S  L  K  S  R  L  T  I  S  M  A  K  S  
                    Query_10280  88   TGGAGTGGATTGGGGAAATTTTTCCTAATGGAAACACCAACTACAGCCCGTCCCTCAAGAGTCGACTCACCATTTCAATGGCTAAGTCCA  177
V  86.2% (213/247)  IGHV4-4*01   137  ...................C.A..A..G...G.G...........A...................G.......A...G.A.AC.......  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  Q  V  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  T  F  A  S  H  Y  L  
                    Query_10280  178  AGAACCAGGTCTCCCTGAAACTTAACTCTGTGACGGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGACTTTCGCTTCGCACTACCTAC  267
V  86.2% (213/247)  IGHV4-4*01   227  ........T..........G..G.G.........C......................G.........-----------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                          
D  100.0% (5/5)     IGHD1-26*01  16   ---------------------------------------------------------------------------------.....----  20

                                      ---------->                              
                                      H  L  D  V  W  G  Q  G  A  T  V  S  V  S 
                    Query_10280  268  ATTTGGACGTCTGGGGCCAAGGGGCCACGGTCAGCGTCTCC  308
J  94.7% (36/38)    IGHJ6*02     22   ---....................A.........C.......  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_255542

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     9e-100
IGHD6-13*01                                                                                           19.9    0.16  
IGHJ3*01                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCC	CAGCTGGTAC	TGATGTAGGCGT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCAGCTGGTACTGATGTAGGCGTTGCTTTTGATGCC	ARGPAGTDVGVAFDA	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  L  S  G  G  S  I  S  S  G  G  F  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_10281  1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGGCTCCATCAGCAGTGGTGGTTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.2% (238/250)  IGHV4-31*03  49   .....................G..............................A........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  Y  S  G  S  T  F  Y  N  P  S  H  K  S  R  V  T  M  S  V  D  T  S 
                    Query_10281  91   CTGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCACAAGAGTCGAGTTACCATGTCAGTAGACACGTCT  180
V  95.2% (238/250)  IGHV4-31*03  139  .....................T..................A..............T..................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  P  A  G  T  D  V 
                    Query_10281  181  AAGAACCAATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCCCAGCTGGTACTGATGTA  270
V  95.2% (238/250)  IGHV4-31*03  229  ........G..........A.....GC...............................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (10/10)   IGHD6-13*01  12   -------------------------------------------------------------------------..........-------  21

                                      ----------------->                                 
                                       G  V  A  F  D  A  W  G  Q  G  T  M  V  P  L  S  S 
                    Query_10281  271  GGCGTTGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCCCCCTCTCTTCA  321
J  93.5% (43/46)    IGHJ3*01     4    -----...........T......................A..G........  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_255543

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            341     5e-96
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCCACCCGAAAA	TATGACAGTAGTGATTATT	CCTCCCCCCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCACCCGAAAATATGACAGTAGTGATTATTCCTCCCCCCTCTTTGACTAC	STRKYDSSDYSSPLFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	108	6	0	94.7
Total	N/A	N/A	240	229	11	0	95.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  T  N  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_10282  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTACTAACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.4% (229/240)  IGHV4-4*02   49   ..............................................G...........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  R  G  G  S  P  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  K 
                    Query_10282  91   GAGTGGATTGGGGAAATCTATCGTGGTGGGAGCCCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCACTAGACAAGTCCAAA  180
V  95.4% (229/240)  IGHV4-4*02   139  ......................A.A........A.....................................A...G.............G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  S  T  R  K  Y  D  S  S  D  Y 
                    Query_10282  181  AACCAGTTCTCCCTGCGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTTCCACCCGAAAATATGACAGTAGTGATTAT  270
V  95.4% (229/240)  IGHV4-4*02   229  ...............AA.....G.....................................------------------------------  288
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  89.5% (17/19)    IGHD3-22*01  8    ------------------------------------------------------------------------.....T.......G....  25

                                      -------------------->                                  
                                       S  S  P  L  F  D  Y  W  G  Q  E  T  L  V  T  V  S  S  
                    Query_10282  271  TCCTCCCCCCTCTTTGACTACTGGGGCCAGGAAACCCTGGTCACCGTCTCCTCAG  325
D  89.5% (17/19)    IGHD3-22*01  26   .------------------------------------------------------  26
J  97.7% (43/44)    IGHJ4*02     5    -----------....................G.......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_255540

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD1-26*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCACTGC	GAGCTACT	CT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGCACTGCGAGCTACTCTTTTGACTAC	ARDRTASYSFDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  Y  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10283  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATTATTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ........................................G.AG............C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  F  Y  N  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  T  N  N 
                    Query_10283  91   TGGATTGGATATGTCTTTTACAATGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGTTAGACACGACCAACAAC  180
V  93.1% (228/245)  IGHV4-59*01  139  ........G...A...A.....G.....G..........................................AG........T....G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  N  S  V  T  T  A  D  T  A  V  Y  Y  C  A  R  D  R  T  A  S  Y  S  F  D 
                    Query_10283  181  CAGTTCTCCCTAAAACTGAACTCTGTGACCACTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGCACTGCGAGCTACTCTTTTGAC  270
V  93.1% (228/245)  IGHV4-59*01  229  ...........G..G....G..........G..................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD1-26*01  11   --------------------------------------------------------------------------........--------  18
J  100.0% (43/43)   IGHJ4*02     6    ------------------------------------------------------------------------------------......  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10283  271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (43/43)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_255541

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           302     3e-84
IGHD3-16*01                                                                                           10.3    116  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGACGAGGGGCA	GGGGG	CGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGACGAGGGGCAGGGGGCGGTTGACTCT	ARVDEGQGAVDS	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	218	25	0	89.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  K  V  S  G  G  S  I  T  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_10284  4    CCCTGAGACTCTCCTGTAAGGTCTCTGGGGGCTCCATCACGACTTACTACTGGAGTTGGATCCGACAGCCCCCAGGGAAGGGACTGGAGT  93
V  89.7% (218/243)  IGHV4-59*01  50   .....TCC...A....C.CT........T..........GT.G............C........G.........................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  T  G  S  V  N  R  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N  
                    Query_10284  94   GGATTGGGTATATCTATTATACTGGCAGTGTCAACCGCAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAACC  183
V  89.7% (218/243)  IGHV4-59*01  140  ...................C.G...G..CAC....TA..............................A......................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  D  E  G  Q  G  A  V  D  
                    Query_10284  184  AGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTTGACGAGGGGCAGGGGGCGGTTGACT  273
V  89.7% (218/243)  IGHV4-59*01  230  ..............C...G...........................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (5/5)     IGHD3-16*01  18   ----------------------------------------------------------------------------.....---------  22
J  92.9% (39/42)    IGHJ4*02     7    ------------------------------------------------------------------------------------......  12

                                      ->                                  
                                      S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10284  274  CTTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  309
J  92.9% (39/42)    IGHJ4*02     13   AC.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_19660

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           238     5e-65
IGHD3-10*01                                                                                           12.2    33   
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGGAGGGGGC	TTCGGG	ACAGAATTATGGCGGACGACGGGGGACTCTGTC	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGGAGGGGGCTTCGGGACAGAATTATGGCGGACGACGGGGGACTCTGTCCGTC	ARLEGASGQNYGGRRGTLSV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	85	29	0	74.6
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	197	45	0	81.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  S  F  Y  W  G  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_10285  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCAATCAGTAGTTTTTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGCCTGGAG  90
V  81.4% (197/242)  IGHV4-59*08  49   ...............................G...C..........AC......A..........G...C.............A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  A  V  S  Y  R  G  S  T  S  S  N  P  S  L  R  G  R  I  T  L  F  V  C  P  S  N  N 
                    Query_10285  91   TGGGTTGGGGCCGTCTCTTATAGAGGGAGCACCTCCTCCAATCCGTCCCTCAGGGGTCGAATCACCTTATTTGTGTGCCCGTCCAATAAT  180
V  81.4% (197/242)  IGHV4-59*08  139  ...A.....TATA...A...C..T.........AA..A...C..C.......A.A.....G.....A...CA..AGA.A.......G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  V  S  L  E  V  R  S  V  T  A  A  D  S  A  I  Y  Y  C  A  R  L  E  G  A  S  G  Q  N  Y 
                    Query_10285  181  CAAGTTTCCCTGGAAGTGAGGTCTGTGACCGCCGCAGACAGCGCCATTTACTACTGTGCGAGGCTGGAGGGGGCTTCGGGACAGAATTAT  270
V  81.4% (197/242)  IGHV4-59*08  229  ..GT.C......A.GC....C...................CG...G.G..T...........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD3-10*01  13   --------------------------------------------------------------------------......----------  18

                                      GT------------------------>                                 
                                       G  G  R  R  G  T  L  S  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10285  271  GGCGGACGACGGGGGACTCTGTCCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
J  100.0% (37/37)   IGHJ6*02     26   -----------------------.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_19661

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            322     2e-90
IGHD1-20*01                                                                                           12.2    32   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTAAACCGGGATCGTC	GTATAA	AGGGTACG	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAAACCGGGATCGTCGTATAAAGGGTACGACTGCTTTGACCAC	ARLKPGSSYKGYDCFDH	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  I  F  S  T  S  A  M  H  W  I  R  Q  A  P  G  K  G  L  
                    Query_10286  1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCATCTTCAGCACCTCTGCCATGCACTGGATCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.5% (227/248)  IGHV3-7*01   47   ........................C...........C...T..T.G..A.TGG...AG....G................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  T  F  Y  V  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10286  91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGAGACATTCTATGTGGACTCTTTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.5% (227/248)  IGHV3-7*01   137  ....................C...............A..A.............G....................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  L  K  P  G  S  S  Y  
                    Query_10286  181  AGAATTCACTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTATATTACTGTGCGAGACTTAAACCGGGATCGTCGTATA  270
V  91.5% (227/248)  IGHV3-7*01   227  ....C.....G.......................................G.G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-20*01  2    -------------------------------------------------------------------------------------.....  6

                                      GT-------------------->                                
                                      K  G  Y  D  C  F  D  H  W  G  P  G  T  L  V  T  V  S  S
                    Query_10286  271  AAGGGTACGACTGCTTTGACCACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTC  325
D  100.0% (6/6)     IGHD1-20*01  7    .------------------------------------------------------  7
J  93.5% (43/46)    IGHJ4*02     1    ---------...A.......T.........A........................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_282849

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            349     3e-98
IGHD1-7*01                                                                                            16.1    2.4  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGCGA	CCGA	GGAACTAC	CAGGATGTTCGAGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGACCGAGGAACTACCAGGATGTTCGAGAATGCTCTTGATATC	AGDRGTTRMFENALDI	264	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	77	27	23	4	0	85.2
FR2-IMGT	78	128	51	47	4	0	92.2
CDR2-IMGT	129	149	21	21	0	0	100
FR3-IMGT	150	263	114	103	11	0	90.4
CDR3-IMGT (germline)	264	271	8	6	2	0	75
Total	N/A	N/A	271	247	24	0	91.1


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  G  V  S  G  G  A  I  S  S  S  H  W  W  N  W  V  
                    Query_10287  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCGGTGTCTCTGGCGGCGCCATCAGCAGCAGTCACTGGTGGAATTGGGTCC  90
V  91.1% (247/271)  IGHV4-4*02   26   ................T....G....................C.........T...T..........T...A.........G........  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  A  P  G  K  G  L  E  W  I  G  Q  I  Y  H  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  
                    Query_10287  91   GCCAGGCCCCCGGGAAGGGGCTGGAGTGGATTGGGCAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAGGAGTCGAGTCA  180
V  91.1% (247/271)  IGHV4-4*02   116  .....C....A........................G..........................................A...........  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      S  I  S  I  D  T  S  K  H  Q  F  A  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  
                    Query_10287  181  GCATCTCAATAGACACGTCCAAGCACCAGTTCGCCCTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGCGGGCG  270
V  91.1% (247/271)  IGHV4-4*02   206  C...A...G......A.......A........T........C...G...........................G.....C......A.A.  295
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  

                                      -------------CDR3-IMGT------------------>                                  
                                      D  R  G  T  T  R  M  F  E  N  A  L  D  I  W  G  Q  G  T  T  V  I  V  S  S  
                    Query_10287  271  ACCGAGGAACTACCAGGATGTTCGAGAATGCTCTTGATATCTGGGGCCAAGGGACAACGGTCATCGTCTCTTCAG  345
V  91.1% (247/271)  IGHV4-4*02   296  .--------------------------------------------------------------------------  296
                                                                                                                 
D  100.0% (8/8)     IGHD1-7*01   10   -----........--------------------------------------------------------------  17
J  93.8% (45/48)    IGHJ3*02     3    ---------------------------.....T........................T.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_241578

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD2-21*01                                                                                           18.0    0.68  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	G	ATTGCGGTGGTG	TAGTGATGGAACTTGTTACTCTGGTTCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTAT	ARRLRWCSDGTCYSGSFEY	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  K  F  T  S  Y
                    Query_10288  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAAGTTTACCAGCTA  90
V  94.5% (274/290)  IGHV5-51*01  6    ..............................A........G.....................................GC...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  F  P  R  D  S  D  T  R  Y  N  P
                    Query_10288  91   TTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTCGTGACTCCGATACCAGATATAACCC  180
V  94.5% (274/290)  IGHV5-51*01  96   C......................T...........................G.......A....G.......T...........C.G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  D  Q  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  D  S  L  K  A  S  D  T  A
                    Query_10288  181  GTCCTTCCAAGACCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTACCTGCAGTGGGACAGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (274/290)  IGHV5-51*01  186  ...........G.......................A............................AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  R  L  R  W  C  S  D  G  T  C  Y  S  G  S  F  E  Y  W  G  Q  G  T  L  V
                    Query_10288  271  CATGTATTACTGTGCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTATTGGGGCCAGGGAACCCTGGT  360
V  94.5% (274/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD2-21*01  6    ---------------------....T.......---------------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------------------------.....C..C....................  34

                                                    
                                        T  V  S  S  
                    Query_10288  361  CACCGTCTCCTCAG  374
J  95.3% (41/43)    IGHJ4*02     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_241579

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10289  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  98.4% (239/243)  IGHV4-59*01  49   ......................................................................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10289  91   TGGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  .........T................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_10289  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (18/20)    IGHD5-18*01  1    ----------------------------------------------------------------..........C.....T...------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10289  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_10218

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           307     1e-85
IGHD2-2*01                                                                                            12.2    34   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	GGACGAGG	GGACATTGCGGTAGT	GTTACCTGTTTTAATGGGAAATATGACA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGACGAGGGGACATTGCGGTAGTGTTACCTGTTTTAATGGGAAATATGACATTGACTAC	VRTRGHCGSVTCFNGKYDIDY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	221	25	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  D  F  T  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_10290  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAGTGACTTTACTATGCACTGGGTCCGCCAGGTTCCAGGGAAGGGACTGG  90
V  89.8% (221/246)  IGHV3-64*05  47   ............................................AG..A.G.....................C.................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  A  I  S  S  D  G  G  A  T  T  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10290  91   AATTTGTTTCAGCTATCAGTAGTGATGGGGGTGCCACAACCTACGGAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  89.8% (221/246)  IGHV3-64*05  137  ...A............T......A........AG....TA.....C............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  D  T  L  F  L  H  L  S  S  L  R  P  E  D  T  S  I  Y  F  C  V  R  T  R  G  H  C  G  S  
                    Query_10290  181  AGGACACACTGTTTCTTCATTTGAGCAGTCTGAGACCTGAGGACACATCTATTTATTTCTGTGTGAGGACGAGGGGACATTGCGGTAGTG  270
V  89.8% (221/246)  IGHV3-64*05  227  ..A....G....A.G....AA..............G..........GG..G.G....A........------------------------  292
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V                          
D  80.0% (12/15)    IGHD2-2*01   2    --------------------------------------------------------------------------...T....TA.....-  16

                                      DR3-IMGT-------------------------->                                  
                                      V  T  C  F  N  G  K  Y  D  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10290  271  TTACCTGTTTTAATGGGAAATATGACATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_10219

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           350     8e-99
IGHD2-15*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGCCCGCTGCCC	GTGGTGG	GTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATCAGCCCGCTGCCCGTGGTGGGTGCTTTGACTAC	ARDQPAARGGCFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  H  W  M  H  W  V  R  Q  G  P  G  K  G  L  
                    Query_10291  1    GGTCCCTGAGACTCTCCTGCGCAGCCTCTGGATTCACCTTCAGTGGTCACTGGATGCACTGGGTCCGCCAAGGTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-74*01  47   ...................T........................A.CT........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  T  V  G  S  G  I  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  G  
                    Query_10291  91   TGTGGGTCTCACGCATTAATACTGTTGGGAGTGGCATAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  94.8% (237/250)  IGHV3-74*01  137  .............T.......G..A.......A...C..................................................C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Q  P  A  A  R  G  
                    Query_10291  181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCAAGAGATCAGCCCGCTGCCCGTGGTG  270
V  94.8% (237/250)  IGHV3-74*01  227  .......G..................................................C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-15*01  12   ------------------------------------------------------------------------------------......  17

                                      ------------->                                  
                                      G  C  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10291  271  GGTGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (7/7)     IGHD2-15*01  18   .-----------------------------------------------  18
J  100.0% (44/44)   IGHJ4*02     5    ----............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_10216

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           327     8e-92
IGHD3-10*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	N/A	CGGGGAG	GAGGGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGCGGGGAGGAGGGCTTC	ASGEEGF	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	228	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  Y  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10292  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTGACTACTATATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.3% (228/247)  IGHV3-11*06  47   ....................................C...............C....G....A...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  R  S  S  T  H  T  N  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  A  
                    Query_10292  91   AGTGGGTTTCACATATTAGTAGAAGTAGTACTCACACAAACTATGCAGACTCTGTGCAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.3% (228/247)  IGHV3-11*06  137  ...........T.C........T.......G.T..........C............A.................................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  Y  L  Q  M  N  S  L  V  T  D  D  T  A  I  Y  Y  C  A  S  G  E  E  G  F  W  G  
                    Query_10292  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGGTAACCGACGACACGGCTATATATTACTGCGCCAGCGGGGAGGAGGGCTTCTGGGGCC  270
V  92.3% (228/247)  IGHV3-11*06  227  ................................AG.G....G.........G.G........T..G..-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-10*01  15   -------------------------------------------------------------------.......----------------  21
J  97.1% (34/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_10292  271  AGGGAACCCTGGTCACCGTGTCCTCAG  297
J  97.1% (34/35)    IGHJ4*02     22   ...................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_10217

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           330     1e-92
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ5*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGATGGGGAAGGG	ACGATTTTTGGAGTGG	GGTGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGATGGGGAAGGGACGATTTTTGGAGTGGGGTGAGGTTCGACTCT	ARGRWGRDDFWSGVRFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  D  S  G  F  S  L  R  G  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10293  1    GGTCCCTGAGACTCTCCTGTGCAGACTCTGGATTCAGCCTCAGAGGCTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-48*03  47   ........................C...........C.T....TA.T...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  S  G  S  T  R  H  Y  A  D  S  M  K  G  Q  L  T  I  S  R  D  N  A  
                    Query_10293  91   AGTGGATTTCATACATCAGTAGTAGTGGCAGTACCAGACATTACGCAGACTCTATGAAGGGCCAACTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (230/249)  IGHV3-48*03  137  .....G..........T...........T.......T.T.C............G.........G.T........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  R  W  G  R  D  D  
                    Query_10293  181  AGAACTCAGTATATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGAGGTCGATGGGGAAGGGACGATT  270
V  92.4% (230/249)  IGHV3-48*03  227  ........C.G.........................C................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (16/16)   IGHD3-3*01   6    ------------------------------------------------------------------------------------......  11

                                      IMGT--------------------->                                  
                                      F  W  S  G  V  R  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10293  271  TTTGGAGTGGGGTGAGGTTCGACTCTTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  330
D  100.0% (16/16)   IGHD3-3*01   12   ..........--------------------------------------------------  21
J  93.3% (42/45)    IGHJ5*01     7    ---------------..........C........A....C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_241570

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD6-6*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTC	ATTREQLVPIFDF	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	268	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  L  T  S  Y
                    Query_10294  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGCAAGGGCTCTGGATATAGCTTAACCAGTTA  90
V  93.4% (268/287)  IGHV5-51*01  6    ............................................................T.....T........C.....T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  V  P  G  K  G  L  E  W  I  G  I  I  Y  P  A  D  S  E  T  K  Y  S  P
                    Query_10294  91   TTGGATCGCCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATTGGGATCATCTATCCTGCTGACTCTGAAACCAAATACAGCCC  180
V  93.4% (268/287)  IGHV5-51*01  96   C.......G.............A.........................G................G.........T....G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  S  S  S  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_10294  181  GTCCTTCCAAGGCCAGGTCACCATCTCGGCCGACAAGTCCAGCAGCTCCGCCTTCTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (268/287)  IGHV5-51*01  186  ...........................A.............T....A......A.C..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        I  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10294  271  CATATATTATTGTGCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTCTGGGGGCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  93.4% (268/287)  IGHV5-51*01  276  ...G.....C.......---------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------.......A......C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_10215

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           325     3e-91
IGHD2-15*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	ACCCAGT	TTGCAGTGGTGGGAGGTGC	GTCTCGGGCTGGAG	TGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCAGTTTGCAGTGGTGGGAGGTGCGTCTCGGGCTGGAGTGACCAC	ARDPVCSGGRCVSGWSDH	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  P  F  S  G  Y  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_10295  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGCCCTTCAGTGGCTACTACTGGAACTGGATCCGCCAGTCCCCCGGGAAGGGGCTGGAG  90
V  92.6% (226/244)  IGHV4-34*01  49   .........................A.......T..........T..........G.............C....A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  R  G  G  S  T  T  Y  N  P  S  L  K  S  R  V  S  M  S  V  D  T  S  K  N 
                    Query_10295  91   TGGATTGGGGAAATCAATCGCGGTGGAAGCACCACCTACAACCCGTCCCTCAAGAGTCGAGTCAGCATGTCGGTAGACACGTCCAAGAAC  180
V  92.6% (226/244)  IGHV4-34*01  139  ...................ATA............A.............................C...A..A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  V  C  S  G  G  R  C 
                    Query_10295  181  CAGTTCTCCTTGACCCTGACCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGACCCAGTTTGCAGTGGTGGGAGGTGC  270
V  92.6% (226/244)  IGHV4-34*01  229  .........C...AG....G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.2% (16/19)    IGHD2-15*01  7    -----------------------------------------------------------------------...T........T..C...  25

                                      -------------------->                                  
                                       V  S  G  W  S  D  H  G  G  Q  G  T  L  V  T  V  S  S  
                    Query_10295  271  GTCTCGGGCTGGAGTGACCACGGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  95.1% (39/41)    IGHJ4*02     8    --------------....T..T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_10212

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHD1-26*01                                                                                           18.0    0.56  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	AGCA	AGTGGGAGC	CTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAAGCAAGTGGGAGCCTTATGACTCC	ARSKWEPYDS	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10296  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGTACCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.4% (239/248)  IGHV3-74*01  47   ....................................C........G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  K  S  D  G  S  S  G  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10296  91   TGTGGGTCTCACGTATTAAAAGTGATGGGAGTAGCGGAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (239/248)  IGHV3-74*01  137  ...................T...............AC..G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  H  M  N  N  L  R  A  E  D  T  A  L  Y  Y  C  A  R  S  K  W  E  P  Y  D  
                    Query_10296  181  AGAACACGCTGTATCTGCACATGAACAATCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCAAGAAGCAAGTGGGAGCCTTATGACT  270
V  96.4% (239/248)  IGHV3-74*01  227  ...................A.......G......................G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD1-26*01  6    ------------------------------------------------------------------------.........---------  14
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10296  271  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_10213

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           321     7e-90
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	ATGCGTC	ATATCAGTGGC	CGTGTCGATCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAATGCGTCATATCAGTGGCCGTGTCGATCCATTTGACTAC	AKMRHISGRVDPFDY	239	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	20	4	0	83.3
FR3-IMGT	125	238	114	107	7	0	93.9
CDR3-IMGT (germline)	239	244	6	6	0	0	100
Total	N/A	N/A	231	218	13	0	94.4


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  N  G  L  E  W  V  S  A  V 
                    Query_10297  14   TGTGCAGCCTCTGGATTCACCTTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAATGGGCTGGAGTGGGTCTCAGCTGTT  103
V  94.4% (218/231)  IGHV3-23*01  64   ............................G....................................G.....................A..  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  G  G  A  S  R  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_10297  104  AGTGGTGGTGGTGCTAGCAGATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCAAGAACACGCTGTATCTC  193
V  94.4% (218/231)  IGHV3-23*01  154  ......A......G.....C................................................T....................G  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------CDR3-IMGT----------------->
                                       Q  M  N  A  L  R  A  G  D  T  A  V  Y  F  C  A  K  M  R  H  I  S  G  R  V  D  P  F  D  Y 
                    Query_10297  194  CAAATGAACGCCTTGAGAGCCGGGGACACGGCCGTATATTTCTGTGCGAAAATGCGTCATATCAGTGGCCGTGTCGATCCATTTGACTAC  283
V  94.4% (218/231)  IGHV3-23*01  244  .........AG.C.........A.................A..........---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  90.9% (10/11)    IGHD6-19*01  5    ----------------------------------------------------------...G.......---------------------  15
J  97.7% (42/43)    IGHJ4*02     6    ---------------------------------------------------------------------------------.........  14

                                                                        
                                       W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10297  284  TGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  317
J  97.7% (42/43)    IGHJ4*02     15   ............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_10210

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           336     1e-94
IGHD1-7*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGGG	TGGAACT	TACTACCCCCTAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGGGTGGAACTTACTACCCCCTATACTACCTTGACTAC	ARDRGGTYYPLYYLDY	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	126	24	21	3	0	87.5
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  S  R  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_10298  2    CCCTGTCCCTCACCTGCGCAGCCTCTGGATTCACCTTCAGTCGTTATGAAATGAACTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGGAGT  91
V  93.5% (231/247)  IGHV3-48*03  50   .....AGA...T....T........................A...............................A................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  L  S  Y  I  S  S  S  G  G  I  V  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  K  
                    Query_10298  92   GGCTTTCATACATTAGTAGTAGTGGTGGTATCGTATATTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCAAGA  181
V  93.5% (231/247)  IGHV3-48*03  140  ..G.......................A...C.A....C................A...................................  229
                                      W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  S  L  N  L  Q  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  R  G  G  T  Y  Y  P  
                    Query_10298  182  ACTCACTGAATCTGCAAATGGACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGAGATCGGGGTGGAACTTACTACCCCC  271
V  93.5% (231/247)  IGHV3-48*03  230  ........T...........A............C.................................-----------------------  296
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD1-7*01   9    -------------------------------------------------------------------------.......----------  15

                                      ---------------->                                  
                                      L  Y  Y  L  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_10298  272  TATACTACCTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  322
J  95.8% (46/48)    IGHJ4*02     1    ---.....T...............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_10211

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            319     2e-89
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ6*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAGG	ATTACTATGATAGAAGT	CGTCACGACGAATT	CGGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCAGGATTACTATGATAGAAGTCGTCACGACGAATTCGGTCTGGACGTC	ARDQDYYDRSRHDEFGLDV	247	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	132	27	17	4	6	63
FR3-IMGT	133	246	114	109	5	0	95.6
CDR3-IMGT (germline)	247	254	8	8	0	0	100
Total	N/A	N/A	254	231	17	6	90.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  D  S  F  S  S  D  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10299  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCATTCAGCAGCGATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  90.9% (231/254)  IGHV4-4*02   49   ..................G............G...CA.......TAG.......................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><--------CDR2-IMGT--------><-----------------------------------------------
                                       E  W  I  G  E  V  F  D  S  D  S  G  S  A  N  Y  N  P  S  P  K  S  R  V  T  I  S  V  D  K 
                    Query_10299  91   GAGTGGATTGGGGAAGTCTTTGATAGCGATAGTGGGAGCGCCAACTACAACCCGTCCCCCAAGAGTCGAGTCACCATATCAGTAGACAAG  180
V  90.9% (231/254)  IGHV4-4*02   139  ...............A...A.C....------.......A..................T...............................  222
                                       E  W  I  G  E  I  Y  H  S        G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K 

                                      -----FR3-IMGT----------------------------------------------------><-----------------------
                                       S  N  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  D  Y  Y  D 
                    Query_10299  181  TCCAACAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGAGAGACCAGGATTACTATGAT  270
V  90.9% (231/254)  IGHV4-4*02   223  .....G................A.....G...........................G.................----------------  296
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                   
D  94.1% (16/17)    IGHD3-22*01  3    -------------------------------------------------------------------------------...........  13

                                      CDR3-IMGT----------------------->                                 
                                       R  S  R  H  D  E  F  G  L  D  V  W  G  P  G  T  S  V  A  V  S  S 
                    Query_10299  271  AGAAGTCGTCACGACGAATTCGGTCTGGACGTCTGGGGCCCAGGGACCTCGGTTGCCGTCTCCTCA  336
D  94.1% (16/17)    IGHD3-22*01  14   ..T...------------------------------------------------------------  19
J  89.1% (41/46)    IGHJ6*02     17   --------------------....A...............A.......A....CA...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_138511

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     3e-93
IGHD6-13*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATGGG	AGCAGCAGCTG	ATAAGGA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATGGGAGCAGCAGCTGATAAGGAAC	AREWEQQLIRN	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10300  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTGACTATAGCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   .....................................C......AG............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  S  G  S  R  Y  F  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  A  
                    Query_10300  91   AGTGGGTCTCGGGCATTAGTAGCGGTAGTCGCTACTTTTACTACGCAGACTCAGTGAAGGGCCGATTCTCCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ..........ATC.........TA.....A.T...A.A..............................A.....................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  E  W  E  Q  Q  L  I  
                    Query_10300  181  AGAACTCATTGTATTTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTGTATATTACTGTGCGAGAGAATGGGAGCAGCAGCTGATAA  270
V  92.4% (231/250)  IGHV3-21*01  227  ........C.....C.....................C...G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  7    ---------------------------------------------------------------------------...........----  17

                                      ---->                                  
                                      R  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10300  271  GGAACTGGGGCCAGGGAACCCTGGTCACCGTGTCCTCAG  309
J  97.2% (35/36)    IGHJ4*02     13   ---............................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_17972

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           357     1e-100
IGHD3-3*01                                                                                            14.1    8.5   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	236	8	0	96.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_10301  4    CCCTGAGACTCTCCTGTGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  96.7% (236/244)  IGHV4-34*01  50   .....TCC...A....C...............................A.........................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N  
                    Query_10301  94   GGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAACC  183
V  96.7% (236/244)  IGHV4-34*01  140  ........................................................................T.................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V  
                    Query_10301  184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCG  273
V  96.7% (236/244)  IGHV4-34*01  230  ..............................................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  100.0% (7/7)     IGHD3-3*01   9    --------------------------------------------------------------------------------.......---  15

                                      ------------->                                  
                                      A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10301  274  CCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (43/43)   IGHJ4*02     6    -----...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_17971

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         297     8e-83
IGHD3-22*01                                                                                           46.8    1e-09
IGHJ3*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTCCGGACCCCGGGA	TACTATGATAGTAGTGGTTATTATTAC	GGTCGGA	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGGACCCCGGGATACTATGATAGTAGTGGTTATTATTACGGTCGGACTTTTGATGTC	ARVRTPGYYDSSGYYYGRTFDV	241	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	218	28	0	88.6


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  F  S  I  N  T  I  H  F  W  G  W  V  R  Q  P  P  G  K  G  L 
                    Query_10302    1    ACCCTGTCCCTCACCTGCGCTGTTTCTGGTTTCTCCATCAACACTATTCACTTCTGGGGCTGGGTCCGGCAGCCCCCAGGGAAGGGTCTG  90
V  88.6% (218/246)  IGHV4-38-2*01  49   .......................C.......A........G..G.GG.T...A..........A......................G...  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  T  G  S  A  V  Y  N  P  A  L  K  S  R  V  T  I  S  I  D  L  S  K 
                    Query_10302    91   GAGTGGATTGGGTCTATCTATCGTACTGGGAGCGCCGTCTATAACCCGGCCCTCAAGAGTCGAGTCACCATATCAATAGACTTGTCCAAG  180
V  88.6% (218/246)  IGHV4-38-2*01  139  ............AG........A..G.......A..TA...C......T..........................G.....AC.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------------------C
                                         N  H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  T  P  G  Y  Y  D 
                    Query_10302    181  AACCACTTCTCCCTGAAACTAACCTCTGTGACCGCCGCAGACACGGCCGTATATTATTGTGCGAGAGTCCGGACCCCGGGATACTATGAT  270
V  88.6% (218/246)  IGHV4-38-2*01  229  .....G...........G..G.G...........................G.....C.........------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  96.3% (26/27)    IGHD3-22*01    5    ---------------------------------------------------------------------------------.........  13

                                        DR3-IMGT--------------------------->                                  
                                         S  S  G  Y  Y  Y  G  R  T  F  D  V  W  G  Q  G  R  M  V  T  V  S  S  
                    Query_10302    271  AGTAGTGGTTATTATTACGGTCGGACTTTTGATGTCTGGGGCCAAGGGAGAATGGTCACCGTCTCTTCAG  340
D  96.3% (26/27)    IGHD3-22*01    14   ..............C...----------------------------------------------------  31
J  97.8% (44/45)    IGHJ3*01       6    -------------------------........................C....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_17976

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           321     7e-90
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAG	GGGGATC	GTATTACTATGATAGT	CTTGAAGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGGGGGATCGTATTACTATGATAGTCTTGAAGGTTTTGATGTC	TRGGSYYYDSLEGFDV	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	134	30	23	7	0	76.7
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	230	25	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  T  S  G  F  T  F  R  D  F  A  L  S  W  V  R  Q  A  P  G  R  G  L  
                    Query_10303  1    GGTCCCTGAGACTCTCCTGTACAACCTCTGGATTCACATTTCGAGATTTTGCTCTGAGCTGGGTCCGCCAGGCTCCAGGGAGGGGCCTGG  90
V  90.2% (230/255)  IGHV3-49*04  47   .......................G.T...........C...G.T....A....A...........................A...G....  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  A  S  M  R  S  N  N  Y  G  G  V  T  Q  Y  A  A  S  V  K  G  R  S  T  I  S  R  D  
                    Query_10303  91   AGTGGGTTGCTTCCATGAGAAGCAATAATTATGGTGGGGTGACACAATACGCCGCGTCTGTGAAAGGCAGATCCACCATCTCAAGAGATG  180
V  90.2% (230/255)  IGHV3-49*04  137  .......A.G..T...T........AGC..........ACA...G...........................T.................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  K  S  I  A  Y  L  Q  V  N  S  L  I  T  E  D  T  A  M  Y  Y  C  T  R  G  G  S  Y  Y  
                    Query_10303  181  ATTCCAAAAGCATCGCCTATCTGCAAGTGAACAGTCTGATAACCGAGGACACAGCCATGTATTACTGTACTAGAGGGGGATCGTATTACT  270
V  90.2% (230/255)  IGHV3-49*04  227  ..........................A.......C....A................G..................---------------  301
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (16/16)   IGHD3-22*01  1    ----------------------------------------------------------------------------------........  8

                                      R3-IMGT------------------>                                  
                                      Y  D  S  L  E  G  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10303  271  ATGATAGTCTTGAAGGTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  330
D  100.0% (16/16)   IGHD3-22*01  9    ........----------------------------------------------------  16
J  100.0% (44/44)   IGHJ3*01     7    ----------------............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_17975

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           363     2e-102
IGHD1-7*01                                                                                            16.1    2.5   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ACTGGAAATAC	ATAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTC	ARDRTGNTYYGLDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	16	8	0	66.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	261	29	0	90


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  N  D 
                    Query_10304  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTATACTTTCAGTAATGAT  91
V  90.0% (261/290)  IGHV1-18*01  7    ...............................A.................................T........C..C..T.CC.GCT..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  S  F  N  G  N  T  I  Y  A  Q 
                    Query_10304  92   GGTATTAGCTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGGTGGATCAGCTCTTTCAATGGAAACACAATCTACGCACAG  181
V  90.0% (261/290)  IGHV1-18*01  97   .....C...............................T............A.........G...A......T.......A...T......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  M  T  T  E  T  S  T  T  T  A  Y  M  E  L  R  S  L  T  Y  D  D  T  A 
                    Query_10304  182  AATTTACAGGGCAGAGTTACCATGACCACAGAAACTTCTACGACCACAGCCTACATGGAGCTGAGGAGCCTGACATATGACGACACGGCC  271
V  90.0% (261/290)  IGHV1-18*01  187  ..GC.C...........C..............C..A..C....G.............................G..C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                 
                                       V  Y  F  C  A  R  D  R  T  G  N  T  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10304  272  GTGTATTTCTGTGCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  358
V  90.0% (261/290)  IGHV1-18*01  277  .......A............-------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                      
D  90.9% (10/11)    IGHD1-7*01   7    ------------------------.......C...----------------------------------------------------  17
J  95.8% (46/48)    IGHJ6*02     15   ---------------------------------------......A....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_17978

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           329     3e-92
IGHD4-4*01                                                                                            12.2    31   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TACCCCTGGGCATG	GTAACT	CCTGGGG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATACCCCTGGGCATGGTAACTCCTGGGGTGACTTC	ARDTPGHGNSWGDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  N  Y  E  M  N  W  V  R  Q  V  P  G  K  G  L  
                    Query_10305  1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTCAGTAATTATGAAATGAACTGGGTCCGCCAGGTTCCAGGGAAGGGCCTGG  90
V  92.0% (230/250)  IGHV3-48*03  47   ........................C....................G..........................C............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  T  D  G  S  T  T  I  Y  A  D  S  V  R  G  R  F  T  M  S  R  D  N  A  
                    Query_10305  91   AGTGGCTCTCATACATTAGTACTGATGGTAGTACTACAATTTATGCAGACTCTGTGAGGGGCCGATTCACCATGTCCAGAGACAACGCCA  180
V  92.0% (230/250)  IGHV3-48*03  137  .....G.T.............G.AG.........C.T.TAC..C.............A...............C................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  F  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  T  P  G  H  G  N  
                    Query_10305  181  AGAACTCACTGTTTCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGGGATACCCCTGGGCATGGTAACT  270
V  92.0% (230/250)  IGHV3-48*03  227  ............A..........A...........................................A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD4-4*01   9    ------------------------------------------------------------------------------------......  14

                                      ------------->                                
                                      S  W  G  D  F  W  G  Q  G  T  L  A  T  V  S  S
                    Query_10305  271  CCTGGGGTGACTTCTGGGGCCAGGGAACCCTGGCCACCGTCTCCTC  316
J  94.9% (37/39)    IGHJ4*02     8    -------.....A....................T............  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_17979

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           391     6e-111
IGHD4-17*01                                                                                           18.0    0.67  
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGG	CTACGGTGA	GTCCGAGTAGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTCTGGACGTC	ARDLATVSPSSFYYGLDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_10306  2    CAGCTGGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAT  91
V  93.1% (270/290)  IGHV1-18*01  7    .......................G.............................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  K  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_10306  92   GGTATTACCTGGGTGCGGCAGGCCCCTGGACAGGGACTTAAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  181
V  93.1% (270/290)  IGHV1-18*01  97   .....C.G.........A..............A..G...G.........................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  L  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  V  D  D  T  A 
                    Query_10306  182  ATGGTCCGGGACAGAGTCACCTTGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGAGTTGACGACACGGCC  271
V  93.1% (270/290)  IGHV1-18*01  187  .A.C...A..G..........A......C....................C..........C..............TC.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  S  F  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T 
                    Query_10306  272  GTGTATTACTGTGCGAGAGATCTGGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACC  361
V  93.1% (270/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------.........--------------------------------------------------------  12
J  98.1% (51/52)    IGHJ6*02     11   -----------------------------------------------..........A................................  53

                                               
                                       V  S  S 
                    Query_10306  362  GTCTCCTCA  370
J  98.1% (51/52)    IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_78287

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           403     1e-114
IGHD3-3*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCTCC	TACGAGTTTTGGAGTGGTTCTTAT	GTA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCTCCTACGAGTTTTGGAGTGGTTCTTATGTATACTACGATATGGACGTC	ARASYEFWSGSYVYYDMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  T  F  I  S  Y
                    Query_10307  1    GCAGCTGGTGCAGTCTGGAGCCGAAGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCATCAGTTA  90
V  94.5% (274/290)  IGHV1-69*01  6    ..................G..T..G.................................................G........G...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  V  S  W  V  R  L  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  L  G  A  P  N  Y  A  Q
                    Query_10307  91   TGGTGTCAGCTGGGTGCGACTGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGAATCATCCCTATCTTAGGTGCACCAAACTACGCACA  180
V  94.5% (274/290)  IGHV1-69*01  96   ..C.A...............A.................................G..............T...A..G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_10307  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTCAGATCTGAGGACACGGC  270
V  94.5% (274/290)  IGHV1-69*01  186  ........................................................................G.................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        F  Y  Y  C  A  R  A  S  Y  E  F  W  S  G  S  Y  V  Y  Y  D  M  D  V  W  G  Q  G  T  S  V
                    Query_10307  271  CTTTTATTACTGTGCGAGAGCCTCCTACGAGTTTTGGAGTGGTTCTTATGTATACTACGATATGGACGTCTGGGGCCAAGGGACCTCGGT  360
V  94.5% (274/290)  IGHV1-69*01  276  .G.G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  91.7% (22/24)    IGHD3-3*01   5    -------------------------.....T.............A....-----------------------------------------  28
J  96.1% (49/51)    IGHJ6*02     12   ----------------------------------------------------.......G.........................A....  49

                                                   
                                        T  V  S  S 
                    Query_10307  361  CACCGTCTCCTCA  373
J  96.1% (49/51)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_190798

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            332     3e-93
IGHD2-15*01                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	GTGGTA	CTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACGTGGTACTCGGGGTTTTGACTAC	ARHLGTRGTRGFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	22	2	3	81.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	246	231	12	3	93.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_10308  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  87
V  93.9% (231/246)  IGHV4-4*02   49   ...............................G.....T........GTA.......................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  T  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  I  I  S  L  D  T  S  K 
                    Query_10308  88   GAGTGGATTGGGGAAACCTATCACAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCACTAGACACGTCCAAG  177
V  93.9% (231/246)  IGHV4-4*02   139  ................T......T...........................................C.......G......A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  R  G  T  R 
                    Query_10308  178  AATCAGTTCTCCCTGAATCTCAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACGTGGTACTCGG  267
V  93.9% (231/246)  IGHV4-4*02   229  ..C..............G..G.G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-15*01  15   -------------------------------------------------------------------------------......-----  20

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_10308  268  GGTTTTGACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  313
J  97.7% (42/43)    IGHJ4*02     6    ---.........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_5158

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           305     3e-85
IGHD1-26*01                                                                                           10.3    114  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	CCCCA	TGGGA	CT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACCCCATGGGACTCTTTGACTAC	ANPMGLFDY	240	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	24	17	4	3	70.8
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	247	223	21	3	90.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  A  M  S  W  V  R  Q  T  P  G  R  G  L  
                    Query_10309  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGCTTCACCTTTAGCGACTATGCCATGAGCTGGGTCCGCCAGACTCCGGGGAGGGGGCTGG  90
V  90.3% (223/247)  IGHV3-23*01  47   ...............................A............AG.........................G....A....A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  S  G  A     T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10309  91   AGTGGGTCTCATCTATCAGTGACAGTGGTGCTA---CATTCTACGCGGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCGA  177
V  90.3% (223/247)  IGHV3-23*01  137  ...........G....T....GT.......G..GCA...A......A.........................................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  T  L  Y  L  Q  M  N  N  L  R  L  E  D  T  A  I  Y  Y  C  A  N  P  M  G  L  F  D  Y  
                    Query_10309  178  AGAATACACTGTATCTGCAAATGAACAACCTGAGACTCGAGGACACGGCCATCTATTACTGTGCGAACCCCATGGGACTCTTTGACTACT  267
V  90.3% (223/247)  IGHV3-23*01  227  ....C..G...................G.......GC.............G.A..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD1-26*01  8    ------------------------------------------------------------------------.....-------------  12
J  97.7% (43/44)    IGHJ4*02     5    -------------------------------------------------------------------------------...........  15

                                                                       
                                      W  G  Q  G  T  L  V  A  V  S  S  
                    Query_10309  268  GGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  300
J  97.7% (43/44)    IGHJ4*02     16   ....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_5159

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           322     2e-90
IGHD2-8*01                                                                                            21.8    0.041
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-8*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCAA	AGTTAGGCGGACC	ATATTGTACTA	CTATAAATTGTAAT	CCCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGTTAGGCGGACCATATTGTACTACTATAAATTGTAATCCC	AKLGGPYCTTINCNP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	226	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  S  Y  W  M  H  W  V  R  Q  D  P  G  K  G  L  
                    Query_10310  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCGCCTTCAGTTCCTACTGGATGCACTGGGTCCGCCAAGATCCAGGGAAGGGGCTGG  90
V  91.9% (226/246)  IGHV3-74*01  47   ...............................A...A........AG..........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  P  D  G  R  V  Q  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10310  91   TGTGGGTCTCGCGTATTAATCCTGATGGACGTGTCCAAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.9% (226/246)  IGHV3-74*01  137  ..........A.........AG......GA..AG.AC..G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  M  Y  L  Q  M  N  G  L  R  A  E  D  T  S  V  Y  Y  C  A  K  L  G  G  P  Y  C  T  
                    Query_10310  181  AGAACACGATGTATCTGCAAATGAATGGTCTGAGAGCCGAGGACACGTCTGTGTACTACTGTGCAAAGTTAGGCGGACCATATTGTACTA  270
V  91.9% (226/246)  IGHV3-74*01  227  ........C................CA....................G.......T..........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD2-8*01   4    -------------------------------------------------------------------------------...........  14

                                      ---------------->                                  
                                      T  I  N  C  N  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10310  271  CTATAAATTGTAATCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (37/37)   IGHJ5*02     15   --------------.....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_113528

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD2-21*01                                                                                           18.0    0.68  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	G	ATTGCGGTGGTG	TAGTGATGGAACTTGTTACTCTGGTTCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTAT	ARRLRWCSDGTCYSGSFEY	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  K  F  T  S  Y
                    Query_10311  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAAGTTTACCAGCTA  90
V  94.5% (274/290)  IGHV5-51*01  6    ..............................A........G.....................................GC...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  F  P  R  D  S  D  T  R  Y  N  P
                    Query_10311  91   TTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTCGTGACTCCGATACCAGATATAACCC  180
V  94.5% (274/290)  IGHV5-51*01  96   C......................T...........................G.......A....G.......T...........C.G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  D  Q  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  D  S  L  K  A  S  D  T  A
                    Query_10311  181  GTCCTTCCAAGACCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTACCTGCAGTGGGACAGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (274/290)  IGHV5-51*01  186  ...........G.......................A............................AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  R  L  R  W  C  S  D  G  T  C  Y  S  G  S  F  E  Y  W  G  Q  G  T  L  V
                    Query_10311  271  CATGTATTACTGTGCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTATTGGGGCCAGGGAACCCTGGT  360
V  94.5% (274/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD2-21*01  6    ---------------------....T.......---------------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------------------------.....C..C....................  34

                                                    
                                        T  V  S  S  
                    Query_10311  361  CACCGTCTCCTCAG  374
J  95.3% (41/43)    IGHJ4*02     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_277099

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           296     2e-82
IGHD5-18*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTATG	TTGTC	GGATACA	CCTCTCTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTGTCGGATACACCTCTCTCGACTGGTTCGACCCC	VVGYTSLDWFDP	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	102	12	0	89.5
CDR3-IMGT (germline)	246	246	1	1	0	0	100
Total	N/A	N/A	243	216	27	0	88.9


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  I  S  S  S  R  Y  Y  W  G  W  I  R  Q  P  P  G  E  G  
                    Query_10312  4    CCCTGAGACTCTCCTGTACTGTCTCTGGCGCCTCCATCAGCAGTAGTCGTTACTACTGGGGTTGGATCCGCCAGCCCCCAGGGGAGGGGC  93
V  88.9% (216/243)  IGHV4-39*01  50   .....TCC...A....C...........T.G................A.............C.....................A......  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  L  G  S  I  Y  Y  P  E  S  P  Y  Y  N  P  S  L  N  Y  R  V  T  M  S  V  D  T  P  
                    Query_10312  94   TGGAGTGGCTTGGGAGTATCTATTATCCTGAGAGCCCCTACTACAACCCGTCCCTCAATTATCGAGTCACCATGTCCGTAGACACGCCCA  183
V  88.9% (216/243)  IGHV4-39*01  140  ........A.................AG..G....A......................GAG............A............T...  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  Q  F  S  L  R  L  D  S  V  T  A  A  D  T  A  V  Y  Y  Y  V  V  G  Y  T  S  L  D  W  
                    Query_10312  184  AGAACCAGTTCTCCCTGAGACTTGACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTATGTTGTCGGATACACCTCTCTCGACTGGT  273
V  88.9% (216/243)  IGHV4-39*01  230  ..................AG..GAG...........................G.......G..---------------------------  292
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                             
D  100.0% (7/7)     IGHD5-18*01  3    --------------------------------------------------------------------.......---------------  9
J  100.0% (48/48)   IGHJ5*02     4    ------------------------------------------------------------------------------------......  9

                                      ------->                                  
                                      F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10312  274  TCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ5*02     10   ..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_5154

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  L  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10313  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCCTCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.2% (241/248)  IGHV4-31*03  49   ..................................C.A....C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10313  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.2% (241/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_10313  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.2% (241/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10313  271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_5157

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           321     6e-90
IGHD2-21*02                                                                                           18.0    0.58 
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAGTCTGGGCCA	GGTGGTGAC	A	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGAGTCTGGGCCAGGTGGTGACATCGACCTC	ARHESGPGGDIDL	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	228	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  A  H  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_10314  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTGCTCACTACTGGGGCTGGATCCGCCAGCCCCCCGGGAAGGGG  90
V  90.8% (228/251)  IGHV4-39*01  49   ................................................AG.T............................A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  I  I  Y  H  N  T  S  L  K  S  R  V  A  M  S  V  D  T  S 
                    Query_10314  91   CTGGAGTGGATTGGCAGTATATATTATAGTGGGATCATCTACCACAACACGTCCCTCAAGAGTCGAGTCGCCATGTCTGTTGACACGTCC  180
V  90.8% (228/251)  IGHV4-39*01  139  ..............G.....C.............G..C....T.....C....................A....A..C..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  L  L  S  L  N  L  D  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  H  E  S  G  P  G  G 
                    Query_10314  181  AAGAACTTGCTCTCCCTGAACCTGGACTCTGTGACCGCCGCAGACACGGCTCTATATTATTGTGCGAGACATGAGTCTGGGCCAGGTGGT  270
V  90.8% (228/251)  IGHV4-39*01  229  ......CA.T..........G...AG.........................G.G.....C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD2-21*02  11   ------------------------------------------------------------------------------------......  16

                                      ----------->                                  
                                       D  I  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10314  271  GACATCGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (9/9)     IGHD2-21*02  17   ...-------------------------------------------  19
J  97.6% (41/42)    IGHJ5*02     10   ----......C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_5150

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           396     2e-112
IGHD4-17*01                                                                                           21.8    0.043 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGGA	GCC	ACGGTGACTAC	GTCTGGAAACTTCATAAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGAGCCACGGTGACTACGTCTGGAAACTTCATAATTTTGACTAC	ARSHGDYVWKLHNFDY	263	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	30	0	0	100
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	18	3	0	85.7
FR3-IMGT	149	262	114	109	5	0	95.6
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	269	261	8	0	97


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R
                    Query_10315  1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAATGTGTGTGAGCTGGATCCG  90
V  97.0% (261/269)  IGHV2-70*01  30   ..........................................................................................  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  G  V  K  F  Y  N  T  S  L  K  T  R  L  T
                    Query_10315  91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACTCATTGATTGGGATGGTGTTAAGTTCTACAATACATCTCTGAAGACCAGGCTCAC  180
V  97.0% (261/269)  IGHV2-70*01  120  ..................................................A..A...A.A.....GC.......................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  K  D  T  S  K  N  Q  V  A  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  S
                    Query_10315  181  CATCTCCAAGGACACCTCCAAAAACCAAGTGGCCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACGTATTACTGTGCACGGAG  270
V  97.0% (261/269)  IGHV2-70*01  210  ...........................G....T........................................................-  298
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                      ------------CDR3-IMGT------------------>                                 
                                        H  G  D  Y  V  W  K  L  H  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_10315  271  CCACGGTGACTACGTCTGGAAACTTCATAATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  343
D  100.0% (11/11)   IGHD4-17*01  6    --...........------------------------------------------------------------  16
J  100.0% (42/42)   IGHJ4*02     6    -------------------------------..........................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_5152

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            396     2e-112
IGHD6-6*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	292	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	70	1	0	98.6
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	100	14	0	87.7
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  
                    Query_10316  8    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCT  97
V  93.5% (272/291)  IGHV1-8*02   5    ...................G..........................................................C.....C.....  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  
                    Query_10316  98   ATGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCAC  187
V  93.5% (272/291)  IGHV1-8*02   95   .........A.........................................................C......................  184
                                      Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  
                    Query_10316  188  AGAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGG  277
V  93.5% (272/291)  IGHV1-8*02   185  ........C............C.......A..A...C.T....A..................C..........G.GAT....G.......  274
                                      Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-------------CDR3-IMGT------------>                                  
                                      A  V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10316  278  CCGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  361
V  93.5% (272/291)  IGHV1-8*02   275  ....G................---------------------------------------------------------------  295
                                      A  V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01   9    --------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02     9    --------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_5153

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           352     3e-99
IGHD3-10*01                                                                                           14.1    9.2  
IGHJ6*02                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCCGAATAGGGGGCTCGTGCGACCTACGG	TCGGGGA	CCATTTCGGTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCCGAATAGGGGGCTCGTGCGACCTACGGTCGGGGACCATTTCGGTCACTACTACTACGGTATGGACGAC	AAPNRGLVRPTVGDHFGHYYYGMDD	243	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	235	10	0	95.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  S  S  S  Y  A  M  T  W  V  R  R  G  P  G  K  G  L  
                    Query_10317  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACCTCTAGCAGCTATGCCATGACCTGGGTCCGCCGGGGTCCAGGGAAGGGGCTGG  90
V  95.9% (235/245)  IGHV3-23*01  47   ...............................A.......T.................G...........A..C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10317  91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTAGTAACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.9% (235/245)  IGHV3-23*01  137  .............................G...G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  A  P  N  R  G  L  V  R  
                    Query_10317  181  AGAACACCCTGTATCTGCAAATGAACAGCCTGAGAGCAGACGACACGGCCGTATATTACTGTGCGGCCCCGAATAGGGGGCTCGTGCGAC  270
V  95.9% (235/245)  IGHV3-23*01  227  .......G.............................C..G........................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      -----CDR3-IMGT-------------------------------->                                 
                                      P  T  V  G  D  H  F  G  H  Y  Y  Y  G  M  D  D  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10317  271  CTACGGTCGGGGACCATTTCGGTCACTACTACTACGGTATGGACGACTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  350
D  100.0% (7/7)     IGHD3-10*01  14   ------.......-------------------------------------------------------------------  20
J  98.2% (55/56)    IGHJ6*02     7    ------------------------.....................T..................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_112645

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           296     2e-82
IGHD3-3*01                                                                                            21.8    0.042
IGHJ5*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGATGGGGAAGAG	ACGATTTTTGG	GATGGGGTGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGATGGGGAAGAGACGATTTTTGGGATGGGGTGAGGTTCGACTCT	ARARWGRDDFWDGVRFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	219	30	0	88


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  G  S  G  L  S  L  R  G  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10318  1    GGTCCCTGAGACTCTCCTGTACAGGCTCTGGACTCAGTCTCAGAGGCTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTG  90
V  88.0% (219/249)  IGHV3-48*03  47   ....................G...C.......T...CCT....TA.T...........C.............................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  S  G  S  T  R  H  Y  A  D  S  L  K  G  R  L  T  I  S  R  D  N  A  
                    Query_10318  91   AATGGATTTCATACATCAGTAGTAGCGGCAGTACCAGGCATTACGCAGACTCTTTGAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  88.0% (219/249)  IGHV3-48*03  137  .G...G..........T........T..T.......TAT.C............G...........T........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      N  N  S  V  Y  L  Q  M  N  S  L  R  V  A  D  T  A  V  Y  H  C  A  R  A  R  W  G  R  D  D  
                    Query_10318  181  ACAATTCAGTATATCTGCAGATGAACAGCCTGAGAGTCGCGGACACGGCTGTTTATCACTGTGCGAGAGCCCGATGGGGAAGAGACGATT  270
V  88.0% (219/249)  IGHV3-48*03  227  .G..C...C.G........A................C..A................T............---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-3*01   6    ------------------------------------------------------------------------------------......  11

                                      IMGT--------------------->                                  
                                      F  W  D  G  V  R  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10318  271  TTTGGGATGGGGTGAGGTTCGACTCTTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  330
D  100.0% (11/11)   IGHD3-3*01   12   .....-------------------------------------------------------  16
J  93.3% (42/45)    IGHJ5*01     7    ---------------..........C........A....C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_254639

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD3-3*01                                                                                            33.4    2e-05 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGGGGGGCCTT	CGATTTTTGGAGTGGTT	TCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGGGGGGCCTTCGATTTTTGGAGTGGTTTCCACTTTGACTCC	ARLGGAFDFWSGFHFDS	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	68	3	0	95.8
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  T  S  G  Y  S  F  T  T  
                    Query_10319  6    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGCTTTACCACCC  95
V  94.5% (275/291)  IGHV5-51*01  5    ..............................A..................................GG....................G.T  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      H  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  M  G  I  I  Y  P  G  V  S  D  T  R  Y  R  
                    Query_10319  96   ACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACATGGGGATCATCTATCCTGGTGTCTCTGATACCAGATACAGAC  185
V  94.5% (275/291)  IGHV5-51*01  95   .........G...................................GG......................A..................C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  
                    Query_10319  186  CGTCCTTCCAAGGCCAAGTCACCATCTCAGCCGACAAGTCCGTCAGTACCGCCTACCTGCAGTGGAGGAGCTTGAAGGCCTCGGACACCG  275
V  94.5% (275/291)  IGHV5-51*01  185  ................G........................A....C....................C...C..................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><--------------------CDR3-IMGT-------------------->                         
                                      A  M  Y  Y  C  A  R  L  G  G  A  F  D  F  W  S  G  F  H  F  D  S  W  G  Q  G  T  L  V  T  
                    Query_10319  276  CCATGTATTATTGTGCGAGACTAGGGGGGGCCTTCGATTTTTGGAGTGGTTTCCACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCG  365
V  94.5% (275/291)  IGHV5-51*01  275  ..........C..........---------------------------------------------------------------------  295
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (17/17)   IGHD3-3*01   7    ----------------------------------.................---------------------------------------  23
J  97.8% (44/45)    IGHJ4*02     4    ------------------------------------------------------.........A..........................  39

                                               
                                      V  S  S  
                    Query_10319  366  TCTCCTCAG  374
J  97.8% (44/45)    IGHJ4*02     40   .........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_254638

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           305     3e-85
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	239	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	11	1	0	91.7
CDR1-IMGT	26	49	24	18	6	0	75
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	17	7	0	70.8
FR3-IMGT	125	238	114	109	5	0	95.6
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	233	214	19	0	91.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 
                    Query_10320  14   TGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATT  103
V  91.8% (214/233)  IGHV3-21*01  64   ...........TG.....AC........G.T....C......................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_10320  104  AGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAATTCACTGTATCTG  193
V  91.8% (214/233)  IGHV3-21*01  154  ...A.T...A.TAG.....T..A......................................................C............  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------------------CDR3-IMGT----------
                                       Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  W  V  A  G  T  G 
                    Query_10320  194  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGA  283
V  91.8% (214/233)  IGHV3-21*01  244  .................................G.G.....C...........-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (11/11)   IGHD6-19*01  11   ---------------------------------------------------------------------------...........----  21

                                      -------------->                                  
                                       H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10320  284  CACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  332
J  97.7% (42/43)    IGHJ4*02     6    ------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_323597

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	276	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_10321  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  96.5% (276/286)  IGHV5-51*01  6    ..................................................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_10321  91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  96.5% (276/286)  IGHV5-51*01  96   ......................A.......G.............G..........................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_10321  181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAGCACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  96.5% (276/286)  IGHV5-51*01  186  ....................C...................A...........................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10321  271  CGTGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.5% (276/286)  IGHV5-51*01  276  .A..............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_254636

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         396     2e-112
IGHD1-26*01                                                                                           12.2    36    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CACGACCAAGACGATGCAAC	AGTGGG	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACGACCAAGACGATGCAACAGTGGGTGACTAC	ARHDQDDATVGDY	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	75	72	69	3	0	95.8
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	106	8	0	93
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  R  I  S  C  Q  G  S  G  Y  S  F  A  M 
                    Query_10322    4    GTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAGAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTCAGGGTTCTGGATACAGCTTTGCCATG  93
V  93.5% (272/291)  IGHV5-10-1*01  4    .......................A.......A...............................A....................A...GC  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         H  W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  R  D  S  Y  T  T  Y  S 
                    Query_10322    94   CACTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGCGGATTGATCCTCGTGACTCTTATACGACCTACAGC  183
V  93.5% (272/291)  IGHV5-10-1*01  94   T.........G...........................................A...........A.............C.A.......  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  Q  G  R  V  T  I  S  V  D  K  S  I  T  T  A  H  L  Q  W  S  S  L  K  A  S  D  T 
                    Query_10322    184  CCGTCCTTCCAAGGCCGCGTCACCATCTCAGTTGACAAGTCCATCACCACTGCCCATCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACC  273
V  93.5% (272/291)  IGHV5-10-1*01  184  ................A..............C..............G.......T.C...........C.....................  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><--------------CDR3-IMGT-------------->                                  
                                         A  I  Y  Y  C  A  R  H  D  Q  D  D  A  T  V  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10322    274  GCCATCTATTACTGTGCGAGACACGACCAAGACGATGCAACAGTGGGTGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  361
V  93.5% (272/291)  IGHV5-10-1*01  274  .....G...............-------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD1-26*01    6    -----------------------------------------......-----------------------------------------  11
J  97.6% (40/41)    IGHJ4*02       8    -----------------------------------------------..................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_323595

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           388     4e-110
IGHD3-10*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTAT	CAATTAGACT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATCAATTAGACTACTACTTTGACTAC	ARGLYYYQLDYYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	249	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10323  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  99.6% (249/250)  IGHV4-31*03  49   .........................................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10323  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  99.6% (249/250)  IGHV4-31*03  139  ..........................................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  Q  L 
                    Query_10323  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCTCTATTACTATCAATTA  270
V  99.6% (249/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-10*01  2    ---------------------------------------------------------------------------.........------  10

                                      ----------------->                                  
                                       D  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10323  271  GACTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  100.0% (48/48)   IGHJ4*02     1    ----................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_323594

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           399     3e-113
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	TCCTCC	GGGTATATCAGTGGCTGG	GACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGATCCTCCGGGTATATCAGTGGCTGGGACGACTACAACGCTATGGACGTC	AGSSGYISGWDDYNAMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  R  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  F
                    Query_10324  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGTAGTTT  90
V  94.1% (272/289)  IGHV1-69*01  6    ..................G.............A...................................................C..C.A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  A  L  F  G  I  P  N  Y  A  Q
                    Query_10324  91   TGCTATCAGCTGGGTGCGACAGGCCCCAGGACAAGGGCTTGAGTGGATGGGAGGGATCATCGCTCTCTTTGGAATACCAAACTACGCACA  180
V  94.1% (272/289)  IGHV1-69*01  96   ...........................T.................................C..A.......T.C.G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        G  F  Q  G  R  V  M  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_10324  181  GGGGTTCCAGGGCAGAGTCATGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTAAGATCTGAGGACACGGC  270
V  94.1% (272/289)  IGHV1-69*01  186  .AA.................C...................................................G.................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  G  S  S  G  Y  I  S  G  W  D  D  Y  N  A  M  D  V  W  G  Q  G  T  T  V  T
                    Query_10324  271  CGTCTATTACTGTGCGGGATCCTCCGGGTATATCAGTGGCTGGGACGACTACAACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCAC  360
V  94.1% (272/289)  IGHV1-69*01  276  ...G............A..-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  94.4% (17/18)    IGHD6-19*01  1    -------------------------.......G..........-----------------------------------------------  18
J  96.2% (51/53)    IGHJ6*02     10   -----------------------------------------------.....T...G.................................  52

                                                
                                        V  S  S 
                    Query_10324  361  CGTCTCCTCA  370
J  96.2% (51/53)    IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_323593

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           364     5e-103
IGHD6-13*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	GCAGCAGATGG	ACTTCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCAGCAGATGGACTTCGACTACTACTACGGTTTTGACGTC	ARGQQMDFDYYYGFDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10325  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAATACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-33*01  47   ..........................................G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  N  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10325  91   AGTGGGTGGCAGTCATATGGTATGATGGAAGTAATAAATACAATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.8% (241/249)  IGHV3-33*01  137  .............T...........................T...C............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  K  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  Q  Q  M  D  F  D  
                    Query_10325  181  AGAACACACTGTATCTGCAAATGAAGAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGCAGCAGATGGACTTCGACT  270
V  96.8% (241/249)  IGHV3-33*01  227  .......G.................C..........C................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD6-13*01  8    ----------------------------------------------------------------------.......C...---------  18
J  96.4% (54/56)    IGHJ6*02     7    ---------------------------------------------------------------------------------------...  9

                                      T------------------>                                 
                                      Y  Y  Y  G  F  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10325  271  ACTACTACGGTTTTGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.4% (54/56)    IGHJ6*02     10   ...........A.G.......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_323592

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           388     5e-110
IGHD3-3*01                                                                                            18.0    0.69  
IGHJ5*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATCACGGCCCGCTAGTGGTACG	GGTTATTAT	GGACCG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATCACGGCCCGCTAGTGGTACGGGTTATTATGGACCGAACTGCTTCGACCCC	ARGSRPASGTGYYGPNCFDP	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	16	8	0	66.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  A  S  G  D  S  F  S  G  Y
                    Query_10326  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGGCTTCAGGGGACTCCTTCAGTGGGTA  90
V  92.8% (269/290)  IGHV1-69*01  6    ..................G...........................................A......T..A.G.A.......CA.C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  I  P  I  L  G  S  A  N  H  A  Q
                    Query_10326  91   TGGAATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGTGATCATCCCTATCCTTGGTTCAGCAAACCACGCACA  180
V  92.8% (269/290)  IGHV1-69*01  96   ..CT....G............................................G.............T.....A........T.......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  K  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  A  E  D  T  A
                    Query_10326  181  GAAGTTCAAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGTTGAGCAGCCTGAGAGCTGAAGACACGGC  270
V  92.8% (269/290)  IGHV1-69*01  186  .......C.....................................................C..............T....G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  Y  C  A  R  G  S  R  P  A  S  G  T  G  Y  Y  G  P  N  C  F  D  P  W  G  Q  G  T  L
                    Query_10326  271  CATGTATTACTGTGCGAGAGGATCACGGCCCGCTAGTGGTACGGGTTATTATGGACCGAACTGCTTCGACCCCTGGGGCCAGGGAACCCT  360
V  92.8% (269/290)  IGHV1-69*01  276  .G..................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (9/9)     IGHD3-3*01   20   -------------------------------------------.........--------------------------------------  28
J  98.0% (48/49)    IGHJ5*02     3    ----------------------------------------------------------.....G..........................  34

                                                       
                                        V  T  V  S  S  
                    Query_10326  361  GGTCACCGTCTCCTCAG  377
J  98.0% (48/49)    IGHJ5*02     35   .................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_323591

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD7-27*01                                                                                           12.2    37    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGGCCAACCGCCTGGGCGTTAAC	ACTGGG	AC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGCCAACCGCCTGGGCGTTAACACTGGGACCTACTTTGACTCC	ARRANRLGVNTGTYFDS	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	70	1	0	98.6
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  G  S  G  D  T  F  P  G  
                    Query_10327  5    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGAGACACCTTTCCCGGCT  94
V  94.8% (276/291)  IGHV5-51*01  5    ..............................A...........................................T...G....A..A...  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  F  P  G  D  S  D  T  K  Y  S  
                    Query_10327  95   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAGGGCCTGGAGTGGATGGGGTTCATCTTTCCTGGTGACTCTGATACCAAATACAGCC  184
V  94.8% (276/291)  IGHV5-51*01  95   ..................................A..................A......A....................G........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  A  F  Q  G  Q  V  T  F  S  A  D  K  S  I  G  T  A  Y  L  Q  W  S  R  L  K  A  S  D  T  
                    Query_10327  185  CGGCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCGGCACCGCCTACCTGCAGTGGAGTAGGTTGAAGGCCTCGGACACCG  274
V  94.8% (276/291)  IGHV5-51*01  185  ..T....................A....................A......................C..CC..................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><--------------------CDR3-IMGT-------------------->                         
                                      A  M  Y  Y  C  A  R  R  A  N  R  L  G  V  N  T  G  T  Y  F  D  S  W  G  Q  G  T  L  V  S  
                    Query_10327  275  CCATGTATTACTGTGCGAGACGGGCCAACCGCCTGGGCGTTAACACTGGGACCTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCTCCG  364
V  94.8% (276/291)  IGHV5-51*01  275  .....................---------------------------------------------------------------------  295
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD7-27*01  4    --------------------------------------------......----------------------------------------  9
J  95.7% (45/47)    IGHJ4*02     2    ----------------------------------------------------...........A......................A...  39

                                               
                                      V  S  S  
                    Query_10327  365  TCTCCTCAG  373
J  95.7% (45/47)    IGHJ4*02     40   .........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_323590

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_10328  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGAGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCCACTTA  90
V  95.5% (278/291)  IGHV5-51*01  6    .......................................G..........................................A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  N  P
                    Query_10328  91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAACCC  180
V  95.5% (278/291)  IGHV5-51*01  96   C.......G.................................................T.................A.........G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_10328  181  GTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  .......C.....................C...........................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_10328  271  CATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD1-26*01  4    -----------------------------...G....A.....-----------------------------------------------  17
J  96.5% (55/57)    IGHJ6*02     6    ----------------------------------------------......TA....................................  49

                                                   
                                        T  V  S  S 
                    Query_10328  361  CACCGTCTCCTCA  373
J  96.5% (55/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_85469

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            341     6e-96
IGHD2-21*02                                                                                           12.2    35   
IGHJ4*02                                                                                              43.0    4e-08


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD2-21*02	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GGTGAC	CGGGTCGGGGGCTTACCCCCTTTAA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGACCGGGTCGGGGGCTTACCCCCTTTAATAC	ARVTGSGAYPL*Y	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	94	20	0	82.5
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	253	35	0	87.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  P  C  K  A  S  G  S  T  F  G  S  Y
                    Query_10329  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCTTCAGTGAAGGTCCCCTGCAAGGCTTCTGGATCCACCTTCGGCAGCTA  90
V  87.8% (253/288)  IGHV1-8*02   6    ..................G.......................C............T..................A.......AC......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  R  E  R  *  A  P  G  Q  G  L  E  G  R  G  W  M  N  P  N  S  G  N  T  N  N  A  Q
                    Query_10329  91   TGATATCAACCGGGAGCGATAGGCCCCTGGACAAGGGCTTGAGGGGAGGGGGTGGATGAATCCTAACAGTGGGAACACAAACAATGCACA  180
V  87.8% (253/288)  IGHV1-8*02   96   ..........T...T....C.....A.................T...T...A........C...........T......GG.T.......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  Y  M  G  P  R  S  P  G  C  A  D  P  A
                    Query_10329  181  GAAGTTCCGGGGCAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCTACATGGGGCCGAGGAGTCCGGGGTGTGCCGACCCGGC  270
V  87.8% (253/288)  IGHV1-8*02   186  ........A.......................A...C..C.T.................A..T...C..C.T.A.A.C..AG...A....  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  V  T  G  S  G  A  Y  P  L  *  Y  W  G  P  G  T  L  V  P  V  P  S  
                    Query_10329  271  CGTCTATTACTGTGCGAGGGTGACCGGGTCGGGGGCTTACCCCCTTTAATACTGGGGCCCGGGGACCCTGGTCCCCGTACCCTCAG  356
V  87.8% (253/288)  IGHV1-8*02   276  ...G..............--------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                       
D  100.0% (6/6)     IGHD2-21*02  14   ------------------......--------------------------------------------------------------  19
J  86.5% (32/37)    IGHJ4*02     12   -------------------------------------------------..........A...A.........A....CT......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_85468

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         360     1e-101
IGHD3-10*01                                                                                           10.3    115   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GA	GGGGA	CAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAGGGGACATTATGGACGTC	ARGGDIMDV	244	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10330    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  H  S  G  L  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  R  S 
                    Query_10330    91   CTGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACAGGTCC  180
V  96.0% (240/250)  IGHV4-30-2*01  139  ..............G......T...........AG..C.T...A......................G.......................  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                         K  N  Q  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  D  I  M  D  V 
                    Query_10330    181  AAGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAGGGGACATTATGGACGTC  270
V  96.0% (240/250)  IGHV4-30-2*01  229  ...........C.......A..................................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01    16   ------------------------------------------------------------------------.....-------------  20
J  100.0% (43/43)   IGHJ6*02       20   --------------------------------------------------------------------------------..........  29

                                                                         
                                         W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10330    271  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  303
J  100.0% (43/43)   IGHJ6*02       30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_85467

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           347     7e-98
IGHD3-3*01                                                                                            10.3    123  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTCTTC	TTTTT	CTCCAAGAGAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTCTTCTTTTTCTCCAAGAGAGAGTCTACTACTTTGACTAC	ARSLLFLQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  K  S  G  G  Y  Y  W  S  W  V  R  Q  H  P  G  K  G 
                    Query_10331  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAAGAGTGGTGGCTACTACTGGAGCTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (235/248)  IGHV4-31*03  49   ..................................C.....GC........T...............A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  A  T  S 
                    Query_10331  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGCCACGTCT  180
V  94.8% (235/248)  IGHV4-31*03  139  ..................................G.............C......................C........A.A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  S  L  L  F  L  Q  E 
                    Query_10331  181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACTGTCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTCTTCTTTTTCTCCAAGAG  270
V  94.8% (235/248)  IGHV4-31*03  229  .....................C....C..........C..............................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD3-3*01   10   ----------------------------------------------------------------------------.....---------  14

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10331  271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_85466

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           322     2e-90
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	TCTACAGTGCGGGGCGC	TGGCTGGT	GGCCGGTTGGGTACAT	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10332  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTACCTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGG  90
V  91.5% (227/248)  IGHV3-33*01  47   .............................................G..A....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  H  I  Y  Y  D  G  T  N  K  Y  Y  A  D  S  M  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10332  91   AGTGGGTGGCACATATTTACTATGATGGAACTAATAAGTATTATGCAGACTCCATGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  91.5% (227/248)  IGHV3-33*01  137  ...........GT...A.GG..........G......A..C............G....................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT---------------------------------------------------->                            
                                      R  D  T  P  Y  L  Q  M  N  S  L  R  V  E  D  T  A  M  Y  Y  R  V  R  S  T  V  R  G  A  G  
                    Query_10332  181  GGGATACCCCGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTATGTATTACCGTGTGAGATCTACAGTGCGGGGCGCTGGCT  270
V  91.5% (227/248)  IGHV3-33*01  227  A.A.C..G.T..........................C.............G........T...C....----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  12   -------------------------------------------------------------------------------------.....  16

                                                                                    
                                      W  W  P  V  G  Y  M  G  Q  G  T  L  V  T  V  S
                    Query_10332  271  GGTGGCCGGTTGGGTACATGGGCCAGGGAACCCTGGTCACCGTCTC  316
D  100.0% (8/8)     IGHD6-19*01  17   ...-------------------------------------------  19
J  100.0% (27/27)   IGHJ4*02     17   -------------------...........................  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_85465

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           389     2e-110
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGAGCG	GCACTGGCTGGTA	TTTGGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGAGCGGCACTGGCTGGTATTTGGCCTAC	ARGSGTGWYLAY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  M  F  T  T  Y 
                    Query_10333  2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCCAGGCTTCTGGTTACATGTTTACCACTTAC  91
V  93.1% (269/289)  IGHV1-18*04  7    ...................C........................................A...............CC.......GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  G  Y  N  G  N  T  K  Y  A  Q 
                    Query_10333  92   GGCATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGCTGGGATGGATCAGCGGCTACAATGGTAACACAAAGTATGCACAG  181
V  93.1% (269/289)  IGHV1-18*04  97   ..T..........................................A...............CT.................C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  D  R  V  T  L  T  I  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10333  182  AACCTCCAGGACAGAGTCACCCTGACCATAGACACATCTACGAGCACTGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  93.1% (269/289)  IGHV1-18*04  187  ..G.......G..........A......C.........C........A.....C....................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  G  S  G  T  G  W  Y  L  A  Y  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_10333  272  GTCTATTACTGTGCGCGAGGGAGCGGCACTGGCTGGTATTTGGCCTACTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  353
V  93.1% (269/289)  IGHV1-18*04  277  ..G............A...---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  92.3% (12/13)    IGHD6-19*01  8    -------------------------...G.........--------------------------------------------  20
J  97.4% (37/38)    IGHJ4*02     11   --------------------------------------------......................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_85463

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD3-10*01                                                                                           12.2    32   
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTG	ATGGTT	GTCG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTGTCGTGATGCTTTCGAAATC	ARTRHIDGCRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10334  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (227/249)  IGHV4-61*01  49   .......................C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S 
                    Query_10334  91   CTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  91.2% (227/249)  IGHV4-61*01  139  ....A.........GT............G......CAC..A.........................G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  C 
                    Query_10334  181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTGT  270
V  91.2% (227/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01  9    ----------------------------------------------------------------------------------......--  14

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_10334  271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_85462

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            335     4e-94
IGHD3-22*01                                                                                           16.1    2.3  
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCCTCCCCGACCGTGGGGC	ATGATGGTAGT	CTTTACTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCCTCCCCGACCGTGGGGCATGATGGTAGTCTTTACTATGATGCTTTCGATGTC	ARDPSPTVGHDGSLYYDAFDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10335  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTGCCTATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-7*01   47   ............................................AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  R  D  E  S  R  I  H  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10335  91   AGTGGGTGGCCAACATAAATCGCGATGAGAGTCGGATACACTTTGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.8% (232/250)  IGHV3-7*01   137  ...................G.AA....GA...GA..A.T...A..T............................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  S  L  Y  L  Q  L  N  S  L  R  A  D  D  T  A  I  Y  Y  C  A  R  D  P  S  P  T  V  G  
                    Query_10335  181  AGAACTCACTGTATCTGCAACTGAACAGCCTGAGAGCCGACGACACGGCTATATATTACTGTGCGAGAGACCCCTCCCCGACCGTGGGGC  270
V  92.8% (232/250)  IGHV3-7*01   227  ....................A...................G.........G.G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      DR3-IMGT-------------------------->                                  
                                      H  D  G  S  L  Y  Y  D  A  F  D  V  W  G  Q  G  T  M  V  T  I  A  S  
                    Query_10335  271  ATGATGGTAGTCTTTACTATGATGCTTTCGATGTCTGGGGCCAAGGGACAATGGTCACCATCGCTTCAG  339
D  90.9% (10/11)    IGHD3-22*01  9    .....A.....----------------------------------------------------------  19
J  94.0% (47/50)    IGHJ3*01     1    -------------------.........T..............................G..T......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_85461

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_10336  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_10336  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_10336  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_10336  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_85460

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           291     5e-81
IGHD3-22*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAC	ATAGTACTGG	CCGAATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATAGTACTGGCCGAATCATTGACTAT	ARAHSTGRIIDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G 
                    Query_10337  1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  87.2% (218/250)  IGHV4-31*01  49   ...................C................A...G.A....TGG..A...C....G.............CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  Y  I  Y  H  V  E  S  T  S  R  N  P  S  L  K  S  Q  L  T  I  S  L  D  P  S 
                    Query_10337  91   CTGGAGTGGATGGGATACATCTATCACGTTGAGAGCACCTCCCGCAACCCGTCCCTCAAGAGTCAACTTACCATTTCACTCGACCCGTCT  180
V  87.2% (218/250)  IGHV4-31*01  139  ...........T..G.........T..AG..G........A.TA....................T.G.......A...G.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  S  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  S  T  G  R  I 
                    Query_10337  181  AAGAGCCAGTTCTCCCTAAAACTGACCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCACATAGTACTGGCCGAATC  270
V  87.2% (218/250)  IGHV4-31*01  229  ....A............G..G....G....G.......................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-22*01  12   -------------------------------------------------------------------------......G...-------  21

                                      -------->                                  
                                       I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10337  271  ATTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.6% (41/42)    IGHJ4*02     7    -.......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_100702

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           336     1e-94
IGHD7-27*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GAC	AACTGGGGA	ATTACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGACAACTGGGGAATTACCACTTTGAGGAC	AKGQLGNYHFED	237	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	122	24	18	0	6	75
FR3-IMGT	123	236	114	108	6	0	94.7
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	249	234	9	6	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10338  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCGTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-23*01  47   ......................................T...................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S        G  G  S  T  Y  Y  A  D  S  V  K  D  R  F  S  I  S  R  D  Y  S  
                    Query_10338  91   AGTGGGTCTCAAGTATTAGT------GGTGGTAGCACATACTACGCGGACTCCGTGAAGGACCGGTTCTCCATCTCCAGGGACTATTCCA  174
V  94.0% (234/249)  IGHV3-23*01  137  ...........GC.......GGTAGT....................A.............G.......A..........A...A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  G  Q  L  G  N  Y  H  
                    Query_10338  175  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGGACAACTGGGGAATTACCACT  264
V  94.0% (234/249)  IGHV3-23*01  227  ..................................................G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD7-27*01  3    ------------------------------------------------------------------------.........---------  11
J  93.3% (42/45)    IGHJ4*02     4    ---------------------------------------------------------------------------------------...  6

                                      ------->                                  
                                      F  E  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10338  265  TTGAGGACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  306
J  93.3% (42/45)    IGHJ4*02     7    ....CT.............A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_100701

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           307     1e-85
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGAC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAGGACGATGCTTTTGATATT	VREDDAFDI	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  S  S  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10339  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTTCCTCCAGTATGAACTGGGTCCGGCAGGCTCCAGGGAAGGGGCTGG  90
V  89.2% (223/250)  IGHV3-21*01  47   ...................................A........AG..AT..C..............C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  V  S  S  S  F  E  Y  Y  S  D  A  V  K  G  R  F  T  I  A  R  D  N  A  
                    Query_10339  91   AGTGGGTCTCATCCATTACTGTCAGTAGCAGTTTCGAGTACTATTCAGACGCAGTGAAGGGCCGATTCACCATCGCCAGAGACAATGCCA  180
V  89.2% (223/250)  IGHV3-21*01  137  ..................G.AGT.....T....A.ATA.....CG.....T.......................T..........C....  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  V  R  E  D  D  A  F  D  I  
                    Query_10339  181  AAAAGTCCCTGTATCTGCAAATGAACAGCCTAAGACCCGAGGACACGGCTGTGTATTACTGTGTGAGAGAGGACGATGCTTTTGATATTT  270
V  89.2% (223/250)  IGHV3-21*01  227  .G..C..A.......................G...G...........................C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  98.0% (48/49)    IGHJ3*02     2    --------------------------------------------------------------------------..............C.  17

                                                                       
                                      W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10339  271  GGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  303
J  98.0% (48/49)    IGHJ3*02     18   .................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_100700

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           330     1e-92
IGHD4-4*01                                                                                            14.1    8.2  
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-4*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAAACT	TAACTAC	GCGGGTGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAAACTTAACTACGCGGGTGGTTTTGATGTC	ARDKLNYAGGFDV	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	231	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  N  S  G  V  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10340  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAATAGCGGTGTTCATTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  92.0% (231/251)  IGHV4-31*03  49   ...................C....................GC..T....G.T.C........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  Y  S  G  S  T  Y  Y  S  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_10340  91   CTGGAGTGGATTGGGTACATCTCTTACAGTGGGAGTACCTACTACAGCCCGTCCCTCAAGAGTCGACTTACTATATCAGTAGACACGTCT  180
V  92.0% (231/251)  IGHV4-31*03  139  ......................A............C..........A...................G....C..................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  R  L  G  S  V  T  A  A  D  T  A  M  Y  F  C  A  R  D  K  L  N  Y  A  G 
                    Query_10340  181  AAGAATCAGTTCTCCCTGAGGTTGGGCTCTGTGACTGCCGCAGACACGGCCATGTATTTCTGTGCGAGAGACAAACTTAACTACGCGGGT  270
V  92.0% (231/251)  IGHV4-31*03  229  .....C.............A.C..A................G.........G......A............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD4-4*01   10   -----------------------------------------------------------------------------.......------  16

                                      ----------->                                  
                                       G  F  D  V  W  G  Q  G  I  M  V  T  V  S  S  
                    Query_10340  271  GGTTTTGATGTCTGGGGCCAAGGGATAATGGTCACCGTCTCTTCAG  316
J  97.7% (43/44)    IGHJ3*01     7    --.......................C....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_100705

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           396     2e-112
IGHD5-12*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGAACGTAGAAT	TGGCTAC	AATCCTAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGAACGTAGAATTGGCTACAATCCTAATTGACTAC	ARANVELATILIDY	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	68	3	0	95.8
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  
                    Query_10341  7    TGCAGCTGGTGCAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTAAGACTCTCCTGTGCAGCCTCCGGATTCACCTTCAGTTACT  96
V  93.5% (272/291)  IGHV3-30*03  5    ...........G.....................................G....................T...............AG..  94
                                         Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  G  M  V  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  S  Y  D  G  T  K  I  F  Y  A  
                    Query_10341  97   ATGGCATGGTCTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCACTTATATCATATGATGGAACCAAAATATTCTATGCAG  186
V  93.5% (272/291)  IGHV3-30*03  95   ........CA...........................................G..................GT..T.A..A........  184
                                      Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  E  M  N  S  L  R  I  E  D  T  
                    Query_10341  187  ACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCAAGAACACGCTGTATCTGGAAATGAACAGCCTGAGAATTGAGGACACGG  276
V  93.5% (272/291)  IGHV3-30*03  185  .....................................T.....................C.................GC...........  274
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                  
                                      A  V  H  Y  C  A  R  A  N  V  E  L  A  T  I  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10341  277  CTGTTCATTACTGTGCGAGAGCGAACGTAGAATTGGCTACAATCCTAATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  366
V  93.5% (272/291)  IGHV3-30*03  275  ....GT...............---------------------------------------------------------------------  295
                                      A  V  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD5-12*01  11   ---------------------------------.......--------------------------------------------------  17
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_100704

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           353     9e-100
IGHD3-10*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAA	ATGGTTCGGG	ACTGGTGGGATAGTGAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAAATGGTTCGGGACTGGTGGGATAGTGAATTTGACTAC	AKDKMVRDWWDSEFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  I  W  V  R  Q  A  P  G  K  G  L  
                    Query_10342  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTTAGCAACTATGCCATGATCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-23*01  47   ............................T................G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  *  V  S  G  I  S  G  S  G  G  S  A  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10342  91   AGTAGGTCTCAGGTATTAGTGGTAGTGGTGGGAGCGCATATTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  95.2% (238/250)  IGHV3-23*01  137  ...G........C..................T...A....C............................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  A  D  T  A  V  Y  Y  C  A  K  D  K  M  V  R  D  W  
                    Query_10342  181  AAAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGCGGACACGGCCGTCTATTACTGTGCGAAAGATAAAATGGTTCGGGACTGGT  270
V  95.2% (238/250)  IGHV3-23*01  227  .G.....................................A............A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-10*01  9    --------------------------------------------------------------------------..........------  18

                                      T------------------>                                  
                                      W  D  S  E  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10342  271  GGGATAGTGAATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (43/43)   IGHJ4*02     6    -----------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_100709

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_10343  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AGT.A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S 
                    Query_10343  91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T.A....A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_10343  181  CAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ..............G.....C..................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10343  271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_100708

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            316     2e-88
IGHD3-10*01                                                                                           10.3    123  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCAAATGCGACTA	GGGGA	T	TACAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACCAAATGCGACTAGGGGATTACAACTTCGGTATGGACGTC	AKDQMRLGDYNFGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  G  S  G  F  T  F  S  D  H  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10344  1    GGTCCCTGAGACTCTCCTGTACAGGCTCTGGATTCACTTTCAGCGATCATGGCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  90.4% (226/250)  IGHV3-9*01   47   ....................G...C............C..TGAT...T...C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  N  S  G  S  I  D  Y  A  D  F  L  E  G  R  F  S  I  F  R  D  N  A  
                    Query_10344  91   AGTGGGTCTCAGGTATTAATTGGAATAGTGGTAGTATTGACTATGCGGACTTTCTGGAGGGCCGATTCTCCATCTTCAGAGACAACGCCA  180
V  90.4% (226/250)  IGHV3-9*01   137  ..................G...............C..A.G...........C.G..A...........A......C..............  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  E  M  N  N  L  R  P  D  D  T  A  L  Y  Y  C  A  K  D  Q  M  R  L  G  D  
                    Query_10344  181  AGAACACCCTCTATCTGGAAATGAACAATCTGAGACCTGACGACACGGCCTTGTATTACTGTGCAAAAGACCAAATGCGACTAGGGGATT  270
V  90.4% (226/250)  IGHV3-9*01   227  .....T....G......C.........G.......G....G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD3-10*01  16   -----------------------------------------------------------------------------------.....--  20
J  90.7% (49/54)    IGHJ6*02     9    -----------------------------------------------------------------------------------------.  9

                                      T------------------>                                 
                                      Y  N  F  G  M  D  V  W  G  R  G  T  A  V  T  V  S  S 
                    Query_10344  271  ACAACTTCGGTATGGACGTCTGGGGCCGAGGGACCGCGGTCACCGTCTCGTCA  323
J  90.7% (49/54)    IGHJ6*02     10   ..T...A....................A.......A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_328246

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*04                                                                                         402     3e-114
IGHD3-10*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*04	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCCACGAGAGATAT	GGGGAGTT	CTC	TGATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCACGAGAGATATGGGGAGTTCTCTGATTAC	ARLHERYGEFSDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  Q  A  S  G  F  T  F  T  T  Y
                    Query_10345    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTCAGGCCTCTGGATTCACCTTTACCACCTA  90
V  94.5% (273/289)  IGHV5-10-1*04  6    .............................................................A...GT.......A..G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          F  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_10345    91   CTTCATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  94.5% (273/289)  IGHV5-10-1*04  96   ..GG......................................................................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  Q  V  T  L  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  R  L  K  A  S  D  S  A
                    Query_10345    181  GTCCTTCCAAGGACAGGTCACCCTCTCTGTTGACAAGTCCATCAGTACTGCCTACCTGCAGTGGAGCAGGCTGAAGGCCTCGGACTCCGC  270
V  94.5% (273/289)  IGHV5-10-1*04  186  ............C.........A....A.C...............C.......................C...............A....  275
                                          S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          M  Y  Y  C  A  R  L  H  E  R  Y  G  E  F  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10345    271  CATGTACTACTGTGCGAGACTCCACGAGAGATATGGGGAGTTCTCTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  94.5% (273/289)  IGHV5-10-1*04  276  ......T............-------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD3-10*01    16   ----------------------------------........--------------------------------------------  23
J  97.6% (40/41)    IGHJ4*02       8    ---------------------------------------------...C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_328247

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD1-1*01                                                                                            10.3    116  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	G	ACGAC	CCCAAGGCCAAAGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACCCCAAGGCCAAAGCCTTGACTAC	ARRPQGQSLDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	226	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10346  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGGCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (226/246)  IGHV3-23*01  47   ...............................................T...C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  G  S  G  S  I  R  E  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10346  91   AGTGGGTCTCAAGTGTTAGTGGAAGTGGTAGTATCAGAGAATACGCAGAATCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.9% (226/246)  IGHV3-23*01  137  ...........GC.A.......T......G...G..C.T.C........C........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  E  M  N  S  L  R  P  D  D  T  A  V  Y  Y  C  A  R  R  P  Q  G  Q  S  L  
                    Query_10346  181  AGAACACGCTGTTTCTGGAAATGAACAGCCTGAGACCTGACGACACGGCTGTCTACTACTGTGCGAGACGACCCCAAGGCCAAAGCCTTG  270
V  91.9% (226/246)  IGHV3-23*01  227  ............A....C.................G.C..G........C..A..T..........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD1-1*01   13   -------------------------------------------------------------------.....------------------  17
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_10346  271  ACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  309
J  97.6% (41/42)    IGHJ4*02     10   ...........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_328244

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     2e-124
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGCCTACTTTCTTAGTTGGGGTTACTCTGGTA	GTATAACAGCAGCTGG	CGAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTAC	ARHAYFLSWGYSGSITAAGEIDY	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	285	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  A  T  Y
                    Query_10347  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTGCCACCTA  90
V  97.9% (285/291)  IGHV5-51*01  6    ....................................C........................................G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_10347  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  97.9% (285/291)  IGHV5-51*01  96   ............................................................................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_10347  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  97.9% (285/291)  IGHV5-51*01  186  .........................................................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        M  Y  Y  C  A  R  H  A  Y  F  L  S  W  G  Y  S  G  S  I  T  A  A  G  E  I  D  Y  W  G  Q
                    Query_10347  271  CATGTATTACTGTGCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTACTGGGGCCA  360
V  97.9% (285/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  93.8% (15/16)    IGHD6-13*01  3    -----------------------------------------------------.....G..........---------------------  18
J  100.0% (42/42)   IGHJ4*02     7    --------------------------------------------------------------------------................  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_10347  361  GGGAACCCTGGTCACCGTCTCCTCAG  386
J  100.0% (42/42)   IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_328242

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            339     1e-95
IGHD2-21*01                                                                                           12.2    30   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	TGTGGT	CTGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGTGTGGTCTGCCTTTGACTAC	VRVWSAFDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  V  S  G  F  T  F  S  D  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10348  1    GGTCCCTGAGACTCTCCTGTGTAGTCTCTGGATTCACGTTTAGTGACTATTGGATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-7*03   47   .....................C..C............C......AG..........AG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  H  I  K  P  D  G  S  E  S  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10348  91   AGTGGGTGGCCCACATAAAGCCAGATGGAAGTGAGAGCAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.6% (233/249)  IGHV3-7*03   137  ...........A.........A..............AAT...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  R  V  W  S  A  F  D  Y  
                    Query_10348  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTCTATTATTGTGTGAGAGTGTGGTCTGCCTTTGACTACT  270
V  93.6% (233/249)  IGHV3-7*03   227  ........................................G...........G.....C....C.....---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*01  8    ---------------------------------------------------------------------......---------------  13
J  93.2% (41/44)    IGHJ4*02     5    -------------------------------------------------------------------------------...........  15

                                                                       
                                      W  G  Q  G  A  L  V  S  V  P  S  
                    Query_10348  271  GGGGCCAGGGAGCCCTGGTCTCCGTCCCCTCAG  303
J  93.2% (41/44)    IGHJ4*02     16   ...........A........A.....T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_328240

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           364     5e-103
IGHD3-22*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGCAGGG	TTACTATGATAATAGTG	CGTACGGTTG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGCAGGGTTACTATGATAATAGTGCGTACGGTTGC	ARVQGYYDNSAYGC	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10349  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGGAATCAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-48*03  47   ...................................................A...G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  V  S  Y  I  S  S  S  G  N  S  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10349  91   AGTGCGTTTCATACATTAGTAGTAGTGGTAATAGCATTTACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (241/249)  IGHV3-48*03  137  ....G.........................G..C...A..............T.....................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  Q  G  Y  Y  D  N  
                    Query_10349  181  AGAACTCACTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGTGCAGGGTTACTATGATAATA  270
V  96.8% (241/249)  IGHV3-48*03  227  ................G....................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  94.1% (16/17)    IGHD3-22*01  4    ----------------------------------------------------------------------------...........G..  17

                                      ------------->                                  
                                      S  A  Y  G  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10349  271  GTGCGTACGGTTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  94.1% (16/17)    IGHD3-22*01  18   ...---------------------------------------------  20
J  100.0% (35/35)   IGHJ4*02     14   -------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_328241

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           248     8e-68
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAGGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAGGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	ARGLLIEDPNYVWGSFRRNHNCYTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	92	22	0	80.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	201	43	0	82.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  R  L  E 
                    Query_10350  1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGAGACTGGAG  90
V  82.4% (201/244)  IGHV4-59*01  49   ..................A....C.......G.......A...G..........AG....A.C........C.......A.G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_10350  91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  82.4% (201/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  N  Y 
                    Query_10350  181  CAGTTGTCTCTCAACCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTCTTCTTATCGAGGATCCCAACTAT  270
V  82.4% (201/244)  IGHV4-59*01  229  .....C..C..G..G....G.TCT.....................GT.....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_10350  271  GTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  94.7% (36/38)    IGHJ3*01     13   --------------------------------------...................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_328248

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           335     4e-94
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
Total	N/A	N/A	242	228	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10351  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.2% (228/242)  IGHV3-33*03  47   .....................................C..C.....C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  F  R  D  D  S  
                    Query_10351  91   AGTGGGTGGCAGTTATATGGTATGATGGAATTAAGAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTTCAGAGACGACTCCA  180
V  94.2% (228/242)  IGHV3-33*03  137  ..............................G...T........................................C.......A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_10351  181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCG  270
V  94.2% (228/242)  IGHV3-33*03  227  .......G....A......A..............................G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  90.9% (10/11)    IGHD6-13*01  7    -------------------------------------------------------------------....G......------------  17
J  97.8% (45/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_10351  271  ACCCCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  309
J  97.8% (45/46)    IGHJ5*02     13   .....................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_333732

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           319     2e-89
IGHD2-8*01                                                                                            12.2    32   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCAGTTTGCGCA	TGTATG	GCTATCTTGCCAG	TGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCAGTTTGCGCATGTATGGCTATCTTGCCAGTGACCAG	AKDRSLRMYGYLASDQ	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10352  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATACCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-30*18  47   ..........................................G..G.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  S  D  G  V  H  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10352  91   AGTGGGTGTCAGTTATATCAAGTGATGGAGTTCACAAGTACTATGTCGACTCCGTAAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  90.8% (227/250)  IGHV3-30*18  137  ........G...........TA.......AG.A.T..A.......CA........G..................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  K  S  L  R  V  E  D  T  G  V  Y  F  C  A  K  D  R  S  L  R  M  Y  
                    Query_10352  181  AGAACACTCTCTATCTGCAAATGAAAAGCCTGAGAGTTGAAGACACGGGTGTTTATTTTTGTGCGAAAGATCGCAGTTTGCGCATGTATG  270
V  90.8% (227/250)  IGHV3-30*18  227  .......G..G..............C..........C...G.......C...G....AC...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-8*01   19   ------------------------------------------------------------------------------------......  24

                                      T------------------>                                  
                                      G  Y  L  A  S  D  Q  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_10352  271  GCTATCTTGCCAGTGACCAGTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  324
J  92.7% (38/41)    IGHJ4*02     8    -------------....T.C............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_229066

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            299     2e-83
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCTT	TTCGGGGA	A	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCTTTTCGGGGAAAACTGGTTCGGCCCC	ARRLFGENWFGP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	243	117	103	11	3	88
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	222	24	3	89.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Q  I  W  W  S  W  V  R  Q  A  P  G  K  R  L 
                    Query_10353  1    ACCCTGTCCCTCACCTGCACTGTTTCTGGTGGCTCCATCAGCAGTCAGATCTGGTGGAGTTGGGTCCGCCAGGCCCCAGGGAAGCGGCTT  90
V  89.2% (222/249)  IGHV4-4*02   49   ..................G....C.....................AGT.A......................C...........G....G  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><-----------------------------------------------------
                                       E  W  V  G  E  I  L  H  S  G  S  T  T  T  Y  I  P  S  L  E  S  R  V  T  I  S  I  D  K  S 
                    Query_10353  91   GAGTGGGTTGGGGAAATCCTTCATAGCGGGAGCACCACCACTTACATCCCGTCCCTCGAGAGTCGAGTCACCATCTCAATCGACAAGTCC  180
V  89.2% (222/249)  IGHV4-4*02   139  ......A...........TA......T..........A.---....A..........A................A...G.A.........  225
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N     Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 

                                      FR3-IMGT------------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  R  L  F  G  E  N  W 
                    Query_10353  181  AAGAACCAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCGGACACGGCCATATATTATTGTGCGAGACGTCTTTTCGGGGAAAACTGG  270
V  89.2% (222/249)  IGHV4-4*02   226  ...................A......C........................G.G.....C.........---------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-10*01  13   ---------------------------------------------------------------------------........-------  20
J  93.6% (44/47)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                
                                       F  G  P  W  G  R  G  T  L  V  T  L  S  S
                    Query_10353  271  TTCGGCCCCTGGGGCCGGGGAACCCTGGTCACCCTCTCCTC  311
J  93.6% (44/47)    IGHJ5*02     9    ....A...........A................G.......  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_276329

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD2-21*02                                                                                           14.1    8.2   
IGHJ3*02                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAGAC	GGTGGTAACT	CCTGG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGACGGTGGTAACTCCTGGGATGCTTTTGATATC	ARQDGGNSWDAFDI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10354  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (239/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10354  91   TGGATTGGGTATATCTATTACACTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  ......................G.............................................A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  A  Y  Y  C  A  R  Q  D  G  G  N  S  W  D  A 
                    Query_10354  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGCGTATTACTGTGCGAGACAAGACGGTGGTAACTCCTGGGATGCT  270
V  98.4% (239/243)  IGHV4-59*01  229  ...................G..........................T................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD2-21*02  11   ---------------------------------------------------------------------......G...-----------  20
J  100.0% (49/49)   IGHJ3*02     2    ------------------------------------------------------------------------------------......  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10354  271  TTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  313
J  100.0% (49/49)   IGHJ3*02     8    ...........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_229064

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           325     3e-91
IGHD6-19*01                                                                                           18.0    0.66 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGGG	AGCAATGGCTGG	GGAAGGTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTATGGACGCC	ARGHRGSNGWGRYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	22	2	6	73.3
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	16	5	0	76.2
FR3-IMGT	153	266	114	107	7	0	93.9
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	243	25	6	88.7


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  P  F  S  D  S  G  Y  Y  W  N  W  
                    Query_10355  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGCCCTTCAGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.7% (243/274)  IGHV4-34*01  26   ........T.......T............T................C..T......T.........------....C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  
                    Query_10355  91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAATCCGTCCCTCCAGAGTCGAG  180
V  88.7% (243/274)  IGHV4-34*01  110  T.........C...........G.....G.............T..A....AG.....G............C.........A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  L  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_10355  181  TCACCATATCACTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.7% (243/274)  IGHV4-34*01  200  ...........G...............................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  G  S  N  G  W  G  R  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  I  S  S 
                    Query_10355  271  GAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCATCTCCTCA  359
V  88.7% (243/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.............T................A.....A..G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_229065

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           364     5e-103
IGHD2-15*01                                                                                           21.8    0.043 
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGGGTATTCTGTTGC	GGTGGTAGGTGCTA	GTG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGGGTATTCTGTTGCGGTGGTAGGTGCTAGTGACAACTGGTTCGACCCC	ARHGGYSVAVVGASDNWFDP	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	242	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  I  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_10356  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATAGTATTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.4% (242/251)  IGHV4-39*01  49   .........................................C.G.....G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  P  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10356  91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGCCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  96.4% (242/251)  IGHV4-39*01  139  ...................................................T......................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  V  S  L  K  L  S  S  M  T  A  T  D  T  A  V  Y  Y  C  A  R  H  G  G  Y  S  V  A 
                    Query_10356  181  AAGAATCAGGTCTCCCTGAAGCTGAGCTCTATGACCGCCACAGACACGGCTGTGTATTACTGTGCGAGACATGGCGGGTATTCTGTTGCG  270
V  96.4% (242/251)  IGHV4-39*01  229  .....C...T....................G........G...............................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD2-15*01  14   -----------------------------------------------------------------------------------------.  14

                                      DR3-IMGT------------------------>                                  
                                       V  V  G  A  S  D  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10356  271  GTGGTAGGTGCTAGTGACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  337
D  92.9% (13/14)    IGHD2-15*01  15   .......C.....------------------------------------------------------  27
J  100.0% (51/51)   IGHJ5*02     1    ----------------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_229062

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD5-18*01                                                                                           14.1    9.5   
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGAG	TACATCTATG	CCTCGGGCGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGAGTACATCTATGCCTCGGGCGGACTGGGTCGACCAC	ARDRSTSMPRADWVDH	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  R  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  I  S  Y 
                    Query_10357  2    CAGCTGGTGCAGTCTAGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTTATCAGTTAT  91
V  95.2% (276/290)  IGHV1-18*01  7    ...............G............A....................................T................C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  T  Y  N  A  N  T  N  S  A  Q 
                    Query_10357  92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCTACAATGCCAACACAAACTCTGCACAG  181
V  95.2% (276/290)  IGHV1-18*01  97   ..........................................................G.G.T.......GT..........A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  I  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10357  182  AACCTCCAGGGCAGAATCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAACTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*01  187  ..G............G...........................................G..............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  D  R  S  T  S  M  P  R  A  D  W  V  D  H  W  G  Q  G  T  L  V  T  V  S 
                    Query_10357  272  GTGTATTACTGTGCGAGAGATCGGAGTACATCTATGCCTCGGGCGGACTGGGTCGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  361
V  95.2% (276/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD5-18*01  6    --------------------------....G.....------------------------------------------------------  15
J  95.8% (46/48)    IGHJ5*02     4    ----------------------------------------------.....T......C...............................  47

                                          
                                       S  
                    Query_10357  362  TCAG  365
J  95.8% (46/48)    IGHJ5*02     48   ....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_229063

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD1-7*01                                                                                            12.2    32   
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGCGAGGA	TGGAAGTAC	GAAGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGCGAGGATGGAAGTACGAAGGCTACTTGTACGGTATGGGCGTC	ARDPRGWKYEGYLYGMGV	232	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	117	21	14	1	6	66.7
FR3-IMGT	118	231	114	107	7	0	93.9
CDR3-IMGT (germline)	232	239	8	8	0	0	100
Total	N/A	N/A	245	230	9	6	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10358  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCAATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.9% (230/245)  IGHV4-59*01  49   ...................................C......................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S        W  S  T  N  Y  N  P  S  L  K  S  R  V  S  T  S  V  D  T  S  K  N 
                    Query_10358  91   TGGATTGGGTATATCTCTT------GGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCAGCACTTCAGTAGACACATCCAAGAAC  174
V  93.9% (230/245)  IGHV4-59*01  139  ................A..ACAGTG.......................................C..TA...........G.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  R  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  R  G  W  K  Y  E  G 
                    Query_10358  175  CAGTTCTCCCGGAAGCTAAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCCGCGAGGATGGAAGTACGAAGGC  264
V  93.9% (230/245)  IGHV4-59*01  229  ..........T......G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (8/9)      IGHD1-7*01   9    ---------------------------------------------------------------------------.....C...------  17
J  92.7% (51/55)    IGHJ6*02     8    -----------------------------------------------------------------------------------------.  8

                                      -------------------->                                 
                                       Y  L  Y  G  M  G  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_10358  265  TACTTGTACGGTATGGGCGTCTGGGGCCAAGGGACCACGGTCTCCGTCTCCTCA  318
J  92.7% (51/55)    IGHJ6*02     9    ....AC..........A.........................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_306998

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           333     1e-93
IGHD3-10*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCACTC	CTATGGATCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTCCTATGGATCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_10359  4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  92.8% (231/249)  IGHV4-31*03  50   .....TCC...A.....A...........GG.......A...................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  A  S  
                    Query_10359  94   TGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTGGACGCGTCTA  183
V  92.8% (231/249)  IGHV4-31*03  140  .................................G.................................T.....A.....A...A......  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  G  H  S  Y  G  S  G  
                    Query_10359  184  AGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTTTTACTGCGCGAGAGGTCACTCCTATGGATCGGGGA  273
V  92.8% (231/249)  IGHV4-31*03  230  ....................C...G...........................G.A......T.......---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  95.5% (21/22)    IGHD3-10*01  7    ----------------------------------------------------------------------------......T.......  20

                                      ---------------->                                  
                                      S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10359  274  GTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  95.5% (21/22)    IGHD3-10*01  21   ........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ---------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_306999

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           325     2e-91
IGHD3-10*01                                                                                           10.3    116  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGA	CTTCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGACTTCAGGCCTTTGACTCC	ARGGLQAFDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  G  G  F  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_10360  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAACAGTGGTGGATTCTACTGGACTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  91.6% (229/250)  IGHV4-31*03  49   ........................................G.........T.A........GC...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  Y  T  G  H  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  L  D  T  S 
                    Query_10360  91   CTAGAGTGGATTGGTTACATCTTTTACACTGGACACACCTACTACAATCCGTCCCTCAGGAGTCGACTTACCATATCACTAGACACATCT  180
V  91.6% (229/250)  IGHV4-31*03  139  ..G...........G.......A.....G...GAG............C..........A.......G...........G.......G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       E  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  L  Q  A  F  D 
                    Query_10360  181  GAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGGGGACTTCAGGCCTTTGAC  270
V  91.6% (229/250)  IGHV4-31*03  229  A...................G.....C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------.....---------------  20
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10360  271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.7% (43/44)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_306997

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           316     2e-88
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGG	AGCAGCAGCT	CTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGGAGCAGCAGCTCTATGACTAC	ARDREQQLYDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10361  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAATTCTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-21*01  47   .....................................C....G.AGC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  D  R  S  T  Y  M  S  H  A  D  S  V  K  G  R  F  T  I  S  R  D  D  G  
                    Query_10361  91   AGTGGGTCGCGTCCATTAGTGACAGAAGTACTTACATGTCCCACGCAGACTCAGTGAAGGGCCGATTCACCATTTCCAGAGACGACGGCA  180
V  90.4% (226/250)  IGHV3-21*01  137  ........T.A.........AGT..T....G......A.A.T...............................C.........A...C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  R  S  V  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  R  E  Q  Q  L  Y  
                    Query_10361  181  AGAGGTCAGTGTATCTGCAAATGAATAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGATAGGGAGCAGCAGCTCTATG  270
V  90.4% (226/250)  IGHV3-21*01  227  ...AC...C................C..............G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD6-13*01  7    ---------------------------------------------------------------------------..........-----  16
J  97.6% (40/41)    IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_10361  271  ACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.6% (40/41)    IGHJ4*02     10   ............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_306994

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            339     2e-95
IGHD4-17*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAC	CTACGGTGACTAC	CTGGCAGGCCCCTGTAAGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACCTACGGTGACTACCTGGCAGGCCCCTGTAAGCTTGACTAC	ARTYGDYLAGPCKLDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  F  R  N  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10362  1    GGTCCCTGAGACTCTCCTGTGTAGGTTCTGGATTCACCTTTAGAAATTTTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  93.9% (232/247)  IGHV3-7*03   47   .....................C..CC.................T.GC.A....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  D  K  D  G  S  E  I  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10362  91   AGTGGGTGGCCAACATAGACAAAGATGGAAGTGAGATATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.9% (232/247)  IGHV3-7*03   137  .................A.GC...............A.....................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  S  L  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  T  Y  G  D  Y  L  A  
                    Query_10362  181  GGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTGTATTACTGTGCGAGGACCTACGGTGACTACCTGGCAG  270
V  93.9% (232/247)  IGHV3-7*03   227  A...........A...........................G..........................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (13/13)   IGHD4-17*01  4    ----------------------------------------------------------------------.............-------  16

                                      T------------------>                                  
                                      G  P  C  K  L  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10362  271  GCCCCTGTAAGCTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  324
J  97.6% (41/42)    IGHJ4*02     7    ------------....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_306995

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           335     4e-94
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_10363  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.9% (229/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  N  R  V  T  I  S  V  D  T  S 
                    Query_10363  91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAATCGAGTCACCATTTCCGTAGACACGTCC  180
V  93.9% (229/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C....G............A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_10363  181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  93.9% (229/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_10363  271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  319
J  97.9% (47/48)    IGHJ4*02     1    -....................................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_306992

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           399     3e-113
IGHD3-3*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GG	TTACGATTTTTGGAGTGGTT	TCAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTTACGATTTTTGGAGTGGTTTCAGACTTTGACTAC	ARVTIFGVVSDFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	271	16	0	94.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T  Y  H 
                    Query_10364  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTACCTACCAC  91
V  94.4% (271/287)  IGHV1-18*04  7    ............................................................................C.......AG.T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  T  D  G  N  T  H  Y  A  H 
                    Query_10364  92   GGTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTACCGATGGGAACACACACTATGCACAC  181
V  94.4% (271/287)  IGHV1-18*04  97   .......G.......................................................TA.A....T......A..........G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  V  Q  G  R  V  T  L  T  T  D  S  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10364  182  AACGTCCAGGGCAGAGTCACCTTGACCACAGACTCATCCACGAGCACCGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.4% (271/287)  IGHV1-18*04  187  ..GC.................A...........A.............A..........................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  V  T  I  F  G  V  V  S  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10364  272  GTGTATTACTGTGCGAGGGTTACGATTTTTGGAGTGGTTTCAGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  94.4% (271/287)  IGHV1-18*04  277  .................-----------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                          
D  100.0% (20/20)   IGHD3-3*01   4    -------------------....................-------------------------------------------------  23
J  100.0% (45/45)   IGHJ4*02     4    -------------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_306993

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD2-21*01                                                                                           18.0    0.60 
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CAGTTTCTGTCTTAGTTTGGACCGGGGAGT	TTGTGGTGG	N/A	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGGGGAGTTTGTGGTGGTTTTGATATG	ARGSFCLSLDRGVCGGFDM	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  N  G  G  S  L  N  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10365  1    ACCCTGTCCCTCACCTGCGCCGTCAATGGTGGGTCCCTCAATGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAG  90
V  92.2% (226/245)  IGHV4-34*01  49   ....................T...T...........T...G..G.......................................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  Q  S  G  T  T  N  Y  K  P  S  L  K  S  R  V  I  T  S  V  D  T  S  K  N 
                    Query_10365  91   TGGATTGGGGAAATCAATCAAAGTGGCACCACCAACTACAAGCCGTCCCTCAAGAGTCGAGTAATCACATCGGTGGACACGTCCAAGAAT  180
V  92.2% (226/245)  IGHV4-34*01  139  ....................T.....A.G............C....................C.C..T...A..A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  F  C  L  S  L  D  R 
                    Query_10365  181  CAGTTCTCCTTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGG  270
V  92.2% (226/245)  IGHV4-34*01  229  .........C.....C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      ----------------------->                               
                                       G  V  C  G  G  F  D  M  W  G  Q  G  T  M  V  T  V  S  
                    Query_10365  271  GGAGTTTGTGGTGGTTTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTT  325
D  100.0% (9/9)     IGHD2-21*01  7    -----.........-----------------------------------------  15
J  97.6% (40/41)    IGHJ3*02     7    --------------.........C...............................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_306990

Length=421
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           419     2e-119
IGHD3-3*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              75.7    7e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AACCCCCCTCCCAAT	GATTTTTGGAGTG	ATGACACAAATAAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAACCCCCCTCCCAATGATTTTTGGAGTGATGACACAAATAAGTACTACTATAATGGAATGGACGTC	ARNPPPNDFWSDDTNKYYYNGMDV	292	363	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	109	5	0	95.6
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	294	281	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_10366  4    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  93
V  95.6% (281/294)  IGHV1-69*12  1    ...........G...........G..................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  S  I  I  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  V  I  P  L  F  G  A  A  K  Y 
                    Query_10366  94   AGCTACTCTATCATCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGGTCATCCCTCTCTTTGGTGCAGCAAAATAT  183
V  95.6% (281/294)  IGHV1-69*12  91   .....TG......G..............................................A........A........A.......C..C  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  S  A  D  E  P  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_10366  184  GCACAGAAGTTCCAGGGCAGAGTCACGATTAGCGCGGACGAACCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGAC  273
V  95.6% (281/294)  IGHV1-69*12  181  ...............................C..........T...............................................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------------------CDR3-IMGT------------------------------>
                                       T  A  V  Y  Y  C  A  R  N  P  P  P  N  D  F  W  S  D  D  T  N  K  Y  Y  Y  N  G  M  D  V 
                    Query_10366  274  ACGGCCGTCTATTACTGTGCGAGAAACCCCCCTCCCAATGATTTTTGGAGTGATGACACAAATAAGTACTACTATAATGGAATGGACGTC  363
V  95.6% (281/294)  IGHV1-69*12  271  ........G...............------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (13/13)   IGHD3-3*01   8    ---------------------------------------.............--------------------------------------  20
J  89.5% (51/57)    IGHJ6*02     6    ------------------------------------------------------------------........CT.C..T.........  29

                                                                       
                                       W  G  Q  G  A  T  V  T  V  S  S 
                    Query_10366  364  TGGGGCCAAGGGGCAACGGTCACCGTCTCCTCA  396
J  89.5% (51/57)    IGHJ6*02     30   ............A.C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41340456


Query= Query_227735

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           318     6e-89
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	240	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E  
                    Query_10367  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAGT  93
V  91.8% (223/243)  IGHV4-59*08  50   .....TCC...A.............................A.................A........C.........A...........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  S  L  K  P  R  V  T  I  S  L  D  T  S  K  N  
                    Query_10367  94   GGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCTCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGTCCAAGAACC  183
V  91.8% (223/243)  IGHV4-59*08  140  ..A....G......T.......T..............................AG............A...G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------------CDR3-IM
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G  
                    Query_10367  184  AGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGTT  273
V  91.8% (223/243)  IGHV4-59*08  230  ............A......C..........................G.....C..........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  91.7% (11/12)    IGHD3-10*01  4    ----------------------------------------------------------------------........G...--------  15

                                      GT-------------------------->                                  
                                      Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_10367  274  ATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  336
J  94.2% (49/52)    IGHJ1*01     1    -----------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_54861

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           360     1e-101
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	T	GAGTTTAGCACCTC	CGCGGAGTATGCGCGCCG	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTGAGTTTAGCACCTCCGCGGAGTATGCGCGCCGATTACTACAATAACTACGCTATGGACGTC	ARVSLAPPRSMRADYYNNYAMDV	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	237	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10368  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (237/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_10368  91   TGGATTGGGTATATTAATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAGC  180
V  97.1% (237/244)  IGHV4-59*01  139  ..............CT........................................................................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  V  S  L  A  P  P  R  S  M 
                    Query_10368  181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTTCTGTGCGCGAGTGAGTTTAGCACCTCCGCGGAGTATG  270
V  97.1% (237/244)  IGHV4-59*01  229  ...............C...............................G....A.......A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  85.7% (12/14)    IGHD6-6*01   1    -----------------------------------------------------------------....A.....G...-----------  14

                                      3-IMGT----------------------------->                                 
                                       R  A  D  Y  Y  N  N  Y  A  M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_10368  271  CGCGCCGATTACTACAATAACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  339
J  91.9% (57/62)    IGHJ6*02     1    -------........T.CT......G................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_54860

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           338     4e-95
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	107	7	0	93.9
Total	N/A	N/A	242	229	13	0	94.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  G  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10369  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACGTTGAGTGGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.6% (229/242)  IGHV3-33*03  47   .....................................C..C...A.C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_10369  91   AGTGGGTGGCAGTTATATGGTATGATGGAATTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCA  180
V  94.6% (229/242)  IGHV3-33*03  137  ..............................G....................................................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_10369  181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCG  270
V  94.6% (229/242)  IGHV3-33*03  227  .......G....A......A..............................G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  90.9% (10/11)    IGHD6-13*01  7    -------------------------------------------------------------------....G......------------  17
J  100.0% (46/46)   IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10369  271  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (46/46)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_196302

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           330     1e-92
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCAAGTT	TGATAGTCGTGGTTA	CCGCCTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCAAGTTTGATAGTCGTGGTTACCGCCTTTTTGACTAC	ARAKFDSRGYRLFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	229	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  S  S  G  F  S  L  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10370  1    GGTCCCTGAGACTCTCCTGTGCATCCTCTGGATTCAGTCTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (229/247)  IGHV3-48*03  47   .......................G............CCT...................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  H  I  S  D  N  D  S  T  K  Y  Y  A  D  S  V  K  G  R  F  S  I  S  S  D  N  A  
                    Query_10370  91   AATGGGTTGCACACATCAGTGATAATGATAGTACCAAATACTACGCAGACTCTGTGAAGGGCCGGTTCTCCATCTCCAGCGACAACGCCA  180
V  92.7% (229/247)  IGHV3-48*03  137  .G......T..T....T...AG..G..G........T...........................A...A..........A..........  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  M  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  K  F  D  S  R  G  
                    Query_10370  181  AGAACTCAATGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAGGGCCAAGTTTGATAGTCGTGGTT  270
V  92.7% (229/247)  IGHV3-48*03  227  ........C........................................T.................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.3% (14/15)    IGHD3-22*01  10   ----------------------------------------------------------------------------.......A......  23

                                      ---------------->                                  
                                      Y  R  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10370  271  ACCGCCTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  93.3% (14/15)    IGHD3-22*01  24   .--------------------------------------------------  24
J  100.0% (43/43)   IGHJ4*02     6    --------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_105281

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           338     5e-95
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCATAGGGGTG	ATTACGATTTTTGGAGGGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCATAGGGGTGATTACGATTTTTGGAGGGGTTATTGACTACTTCGACTAC	ARSIGVITIFGGVIDYFDY	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	229	13	0	94.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_10371  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  94.6% (229/242)  IGHV4-59*08  50   .....TCC...A..............................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  V  Y  Y  S  G  S  T  K  Y  N  P  S  L  Q  S  R  V  T  I  S  L  D  T  S  K  N  
                    Query_10371  94   GGATTGGTTATGTGTATTACAGTGGGAGCACCAAGTATAACCCCTCGCTCCAGAGTCGAGTCACCATATCACTAGACACCTCCAAGAACC  183
V  94.6% (229/242)  IGHV4-59*08  140  .......G...A.C....................C..C........C...A....................G.......G..........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  I  G  V  I  T  I  F  G  
                    Query_10371  184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGATCCATAGGGGTGATTACGATTTTTGGAG  273
V  94.6% (229/242)  IGHV4-59*08  230  ..............................................................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  95.8% (23/24)    IGHD3-3*01   3    --------------------------------------------------------------------------................  18

                                      ---------------------->                                  
                                      G  V  I  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10371  274  GGGTTATTGACTACTTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  95.8% (23/24)    IGHD3-3*01   19   T.......-------------------------------------------------  26
J  97.9% (47/48)    IGHJ4*02     1    ---------.......T........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_277734

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           308     4e-86
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGTCGTCGAGGGCACACGACATT	TATAGCAGTGGCTGG	GGGAGGCCGGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGTCGTCGAGGGCACACGACATTTATAGCAGTGGCTGGGGGAGGCCGGCTGACTAC	ARASSRAHDIYSSGWGRPADY	230	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	107	7	0	93.9
CDR3-IMGT (germline)	230	236	7	7	0	0	100
Total	N/A	N/A	223	210	13	0	94.2


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  S  H  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  F  I  S  Y  E 
                    Query_10372  14   TCTGGATTCACCTTCAGTAGCCACGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCTTTTATATCATATGAA  103
V  94.2% (210/223)  IGHV3-30*03  73   .....................T.T..................................................AG.............T  162
                                       S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  S  T  K  Y  Y  V  D  S  V  K  G  R  F  T  A  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 
                    Query_10372  104  GGAAGTACTAAATACTATGTAGACTCCGTGAAGGGCCGGTTCACCGCCTCCAGAGACAATTCCAAGAACACACTGTATCTGCAAATGAAC  193
V  94.2% (210/223)  IGHV3-30*03  163  .......A...........C..................A......AT........................G..................  252
                                       G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><--------------------------CDR3-IMGT------------------
                                       S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  A  S  S  R  A  H  D  I  Y  S  S  G  W  G  R  P 
                    Query_10372  194  AGCCTGAGAGCTGATGACACGGCTGTCTATTACTGTGCGAGAGCGTCGTCGAGGGCACACGACATTTATAGCAGTGGCTGGGGGAGGCCG  283
V  94.2% (210/223)  IGHV3-30*03  253  ..............G...........G................-----------------------------------------------  295
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  100.0% (15/15)   IGHD6-19*01  4    ------------------------------------------------------------------...............---------  18

                                      -------->                                  
                                       A  D  Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_10372  284  GCTGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  326
J  97.6% (40/41)    IGHJ4*02     8    --..............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_277736

Length=414
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           399     3e-113
IGHD1-26*01                                                                                           23.8    0.013 
IGHJ6*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGTCTTATGTCCCG	GTGGGAGCTACT	CCCTTAGAAGGGGCCGAGGACA	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGTCTTATGTCCCGGTGGGAGCTACTCCCTTAGAAGGGGCCGAGGACAACGGTATGGACGTC	ARDGSYVPVGATPLEGAEDNGMDV	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  S  F  T  N  H
                    Query_10373  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTTTCCTGCAAGGCGTCTGGATACAGCTTCACCAATCA  90
V  93.8% (273/291)  IGHV1-46*01  6    ..................................................A...............A..........C........GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  H  A  Q
                    Query_10373  91   CTATGTGCACTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAATAATCAACCCTAGTGGTGGTAGCACAAGTCACGCACA  180
V  93.8% (273/291)  IGHV1-46*01  96   ....A...............................G............................................CT.......  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  T  T  V  Y  M  E  L  R  S  L  R  S  E  D  T  A
                    Query_10373  181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACAACCACAGTGTACATGGAACTACGTAGCCTGAGATCTGAGGACACGGC  270
V  93.8% (273/291)  IGHV1-46*01  186  ..........................................G.G......C........G..GA.C.......................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------------CDR3-IMGT------------------------------>     
                                        V  Y  Y  C  A  R  D  G  S  Y  V  P  V  G  A  T  P  L  E  G  A  E  D  N  G  M  D  V  W  G
                    Query_10373  271  CGTGTACTACTGTGCGAGAGATGGGTCTTATGTCCCGGTGGGAGCTACTCCCTTAGAAGGGGCCGAGGACAACGGTATGGACGTCTGGGG  360
V  93.8% (273/291)  IGHV1-46*01  276  ......T..............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD1-26*01  7    -------------------------------------............-----------------------------------------  18
J  100.0% (47/47)   IGHJ6*02     16   -----------------------------------------------------------------------...................  34

                                                                  
                                        Q  G  T  T  V  T  V  S  S 
                    Query_10373  361  CCAAGGGACCACGGTCACCGTCTCCTCA  388
J  100.0% (47/47)   IGHJ6*02     35   ............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40604112


Query= Query_277731

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           391     5e-111
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGCTTCAGAC	TACTGTGGTTCGGGGAGTTATTAT	N/A	TACAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGCTTCAGACTACTGTGGTTCGGGGAGTTATTATTACATTGACTAC	ARVASDYCGSGSYYYIDY	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	250	0	0	100


Alignments

                                       <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                        T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                     Query_10374  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  100.0% (250/250)  IGHV4-61*01  49   ..........................................................................................  138
                                        T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                       -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                     Query_10374  91   CTGGAGTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  100.0% (250/250)  IGHV4-61*01  139  ..........................................................................................  228
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                       --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  A  S  D  Y  C  G 
                     Query_10374  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTTGCTTCAGACTACTGTGGT  270
V  100.0% (250/250)  IGHV4-61*01  229  ......................................................................--------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.8% (23/24)     IGHD3-10*01  5    ---------------------------------------------------------------------------------....A....  13

                                       -IMGT--------------------->                                  
                                        S  G  S  Y  Y  Y  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_10374  271  TCGGGGAGTTATTATTACATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  95.8% (23/24)     IGHD3-10*01  14   ...............----------------------------------------------  28
J  97.8% (45/46)     IGHJ4*02     3    ---------------...T..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_277730

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD6-13*01                                                                                           18.0    0.55  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CACG	AGCAGCTGG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACACGAGCAGCTGGATTGACTAC	ARDTSSWIDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10375  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ...............................G...........G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  T  G  S  T  N  Y  N  P  S  L  K  S  Q  F  T  I  S  V  D  T  S  K  N 
                    Query_10375  91   TGGATTGGGTATATCTTTTACACTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCAATTCACCATATCAGTAGACACGTCGAAGAAC  180
V  96.3% (236/245)  IGHV4-59*01  139  ................A.....G...................................G.G......................C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  S  S  W  I  D  Y  W 
                    Query_10375  181  CAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACACGAGCAGCTGGATTGACTACTGG  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-13*01  10   ---------------------------------------------------------------------.........------------  18
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------...........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_10375  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (42/42)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_277732

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            414     5e-118
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CACA	TACTATCCTTCGGGGAGTT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATACTATCCTTCGGGGAGTTTACTACGGTATGGACGTC	ARAHTILRGVYYGMDV	273	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	30	0	0	100
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	24	3	0	88.9
FR3-IMGT	159	272	114	112	2	0	98.2
CDR3-IMGT (germline)	273	279	7	6	1	0	85.7
Total	N/A	N/A	279	272	7	0	97.5


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  M  S  G  D  S  V  S  S  N  S  A  A  W  N  W  
                    Query_10376  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATGTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGA  90
V  97.5% (272/279)  IGHV6-1*01   26   ..............................................C...........................................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  R  W  Y  T  D  Y  A  V  S  V  K  
                    Query_10376  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCGAGGTGGTATACTGATTATGCAGTCTCTGTGAAAA  180
V  97.5% (272/279)  IGHV6-1*01   116  .......................................................C.A........A............A..........  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_10376  181  GTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTCTATTACT  270
V  97.5% (272/279)  IGHV6-1*01   206  ..................................................................................G.......  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-------------------CDR3-IMGT------------------>                                 
                                      C  A  R  A  H  T  I  L  R  G  V  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10376  271  GTGCGAGAGCACATACTATCCTTCGGGGAGTTTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  353
V  97.5% (272/279)  IGHV6-1*01   296  ....A....--------------------------------------------------------------------------  304
                                      C  A  R                                                                            
D  89.5% (17/19)    IGHD3-10*01  5    -------------......GG...........---------------------------------------------------  23
J  100.0% (51/51)   IGHJ6*02     12   --------------------------------...................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_196304

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            382     3e-108
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10377  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_10377  91   AGTGGGTGGCCAACATAAAGCAGGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  98.8% (247/250)  IGHV3-7*01   137  ......................A...........................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_10377  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  98.8% (247/250)  IGHV3-7*01   227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10377  271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_277739

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*03                                                                                           332     3e-93
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*03	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AATGCCA	TTCGGGG	G	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGAAATGCCATTCGGGGGTGCCTTTGATATA	VKEMPFGGAFDI	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  I  F  S  S  Y  S  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10378  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCATCTTCAGTAGCTATTCTATACATTGGGTCCGCCAGGCTCCAGGGAAGGGACTGA  90
V  92.4% (231/250)  IGHV3-64*03  47   ....................................C.............G....G..C..............................G  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      K  H  V  S  V  I  S  S  D  G  D  S  T  Y  Y  A  D  S  V  Q  G  R  F  T  L  S  R  D  N  S  
                    Query_10378  91   AACATGTATCAGTTATTAGTAGTGATGGGGATAGCACATATTACGCAGACTCAGTGCAGGGCAGATTCACCTTGTCCAGAGACAATTCCA  180
V  92.4% (231/250)  IGHV3-64*03  137  ..T....T....C..........A......G.........C...............A..............A.C................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  K  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  E  M  P  F  G  G  A  
                    Query_10378  181  AGAACAAGTTGTATCTCCAAATGAGCAGTCTGAGACCTGAGGACACGGCTGTTTATTACTGTGTGAAAGAAATGCCATTCGGGGGTGCCT  270
V  92.4% (231/250)  IGHV3-64*03  227  ......C.C.....G....................G................G.................--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (7/7)     IGHD3-10*01  13   -----------------------------------------------------------------------------.......------  19
J  93.6% (44/47)    IGHJ3*02     4    -------------------------------------------------------------------------------------...T.  8

                                      ------->                                  
                                      F  D  I  W  G  Q  G  T  T  V  T  V  S  S  
                    Query_10378  271  TTGATATATGGGGCCAAGGGACAACGGTCACCGTCTCTTCAG  312
J  93.6% (44/47)    IGHJ3*02     9    .......C................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_277738

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           364     5e-103
IGHD3-10*01                                                                                           14.1    9.4   
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGCC	ACTATGG	GGATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATC	ARSHYGDAYWYLDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	260	27	0	90.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  G  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T  S  Y 
                    Query_10379  2    CAGCTGGTGCAGTCTGGAGCTGGGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATCTTCACCAGTTAT  91
V  90.6% (260/287)  IGHV1-18*01  7    ......................A..........................................T..........C...T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  F  E  W  M  G  W  I  S  P  Y  N  G  N  T  A  Y  A  E 
                    Query_10379  92   GGAATCACTTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAGCCTACGCAGAG  181
V  90.6% (260/287)  IGHV1-18*01  97   ..T....GC...........................C.......................G.................AA...T...C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  F  T  V  A  T  E  T  S  T  N  T  A  F  M  E  L  R  S  L  K  A  D  D  T  A 
                    Query_10379  182  AAGTTCCAGGGCAGATTCACCGTGGCCACAGAGACTTCCACGAACACAGCCTTCATGGAGCTGCGGAGTCTGAAAGCTGACGACACGGCC  271
V  90.6% (260/287)  IGHV1-18*01  187  ...C...........G.....A..A.......C..A.......G........A..........A....C....G.T..............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  S  H  Y  G  D  A  Y  W  Y  L  D  I  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10379  272  GTCTATTACTGTGCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  359
V  90.6% (260/287)  IGHV1-18*01  277  ..G..............-----------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                          
D  100.0% (7/7)     IGHD3-10*01  6    ----------------------.......-----------------------------------------------------------  12
J  96.2% (51/53)    IGHJ2*01     1    -----------------------------------..........T.....C....................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_54864

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         349     3e-98
IGHD2-2*01                                                                                            31.5    6e-05
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGGGG	TATTGTAGTAGTGCCAACTGATATG	GGGGCAGGGGGCCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGGGGTATTGTAGTAGTGCCAACTGATATGGGGGCAGGGGGCCCATTTGACCAC	ARLRGIVVVPTDMGAGGPFDH	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10380    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  94.8% (236/249)  IGHV4-30-4*01  49   ..................A.......................................................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  Y  S  G  T  T  Y  Y  S  T  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_10380    91   CTGGAGTGGATTGGGTACATCCATTACAGTGGGACCACCTACTACAGTACGTCCCTCAAGAGTCGACTTACCATATCGGTAGACACGTCT  180
V  94.8% (236/249)  IGHV4-30-4*01  139  .....................T............G...........ACC.................G..........A...........C  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------------
                                         Q  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  R  G  I  V  V  V 
                    Query_10380    181  CAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGACTTCGGGGTATTGTAGTAGTG  270
V  94.8% (236/249)  IGHV4-30-4*01  229  A........................................A...........G...........C...---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.0% (22/25)    IGHD2-2*01     5    -----------------------------------------------------------------------------............A  17

                                        CDR3-IMGT-------------------------->                                  
                                         P  T  D  M  G  A  G  G  P  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10380    271  CCAACTGATATGGGGGCAGGGGGCCCATTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  88.0% (22/25)    IGHD2-2*01     18   ...G...C....----------------------------------------------------------  29
J  97.7% (42/43)    IGHJ4*02       6    ---------------------------......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_339129

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-10*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GCCTC	TATTACTTTCGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGCCTCTATTACTTTCGTTCGGGGAGTTATTTTGACTTC	ARGLYYFRSGSYFDF	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  N  W  V  R  Q  H  P  G  K  G 
                    Query_10381  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAACTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ...............................G.............................G....A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  F  S  I  S  V  D  T  S 
                    Query_10381  91   CTGGAGTGGATTGGGCACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGATTTAGCATTTCAGTAGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ...............T..................G...............................G...C...A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  F  R  S 
                    Query_10381  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGCCTCTATTACTTTCGTTCG  270
V  96.4% (241/250)  IGHV4-31*03  229  .................................................................G....--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (22/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------.......A.G.....  16

                                      ----------------->                                  
                                       G  S  Y  F  D  F  W  G  P  G  T  L  V  P  V  S  S  
                    Query_10381  271  GGGAGTTATTTTGACTTCTGGGGCCCGGGAACCCTGGTCCCCGTCTCCTCAG  322
D  91.7% (22/24)    IGHD3-10*01  17   .........-------------------------------------------  25
J  93.0% (40/43)    IGHJ4*02     6    ---------.......A........A.............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_43480

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           366     2e-103
IGHD2-2*01                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCC	TTGTACTAGTACCAGTTGCTA	CTCCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCCTTGTACTAGTACCAGTTGCTACTCCTTCTACTCGTACGGTCTGGACGTC	AREPCTSTSCYSFYSYGLDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  I  Y  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10382  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTATATATAGTATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-21*01  47   .............................................GC.....C....A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  T  Y  T  Y  Y  A  D  S  M  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10382  91   AGTGGGTCTCATCCATTAGTAGTAGTAGTACTTATACATACTACGCAGACTCAATGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (242/250)  IGHV3-21*01  137  ..............................G...C.T................G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  P  C  T  S  T  S  
                    Query_10382  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGCCTTGTACTAGTACCAGTT  270
V  96.8% (242/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD2-2*01   7    -------------------------------------------------------------------------.....G.........C.  23

                                      R3-IMGT------------------------>                                 
                                      C  Y  S  F  Y  S  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10382  271  GCTACTCCTTCTACTCGTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  90.5% (19/21)    IGHD2-2*01   24   ....-------------------------------------------------------------  27
J  94.5% (52/55)    IGHJ6*02     8    ----------.....AC......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_339127

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           318     6e-89
IGHD3-16*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10383  1    ACCCTGTCCCTCACTTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  90.8% (226/249)  IGHV4-61*01  49   ..............C........C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S 
                    Query_10383  91   CTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  90.8% (226/249)  IGHV4-61*01  139  ....A.........GT............G......CAC..A.........................G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y 
                    Query_10383  181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTAT  270
V  90.8% (226/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------------.....  28

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_10383  271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
D  100.0% (7/7)     IGHD3-16*02  29   ..--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_339126

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     2e-95
IGHD1-26*01                                                                                           12.2    31   
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGATC	GAGCTA	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGAGCTATGATGCTTTTGATCTC	ARVRSSYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_10384  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-21*01  47   ............................................AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  E  Y  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_10384  91   AGTGGGTCTCATCCATTAGTAGTACTAGTGAATACATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  93.6% (233/249)  IGHV3-21*01  137  ........................G....AGT........C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  S  Y  D  A  
                    Query_10384  181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAGTCCGATCGAGCTATGATGCTT  270
V  93.6% (233/249)  IGHV3-21*01  227  ............A......A..............................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-26*01  11   ----------------------------------------------------------------------------......--------  16
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10384  271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_339121

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           277     9e-77
IGHD3-22*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAC	ATAGTACTGG	CCGAATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATAGTACTGGCCGAATCATTGACTAT	ARAHSTGRIIDY	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	22	8	0	73.3
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	100	14	0	87.7
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	213	36	0	85.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G  
                    Query_10385  4    CCCTGAGACTCTCCTGCAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCAGGGAAGGGCC  93
V  85.5% (213/249)  IGHV4-31*01  50   .....TCC...A......C................A...G.A....TGG..A...C....G.............CA..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  M  G  Y  I  Y  H  V  E  S  T  S  R  N  P  S  L  K  S  Q  L  T  I  S  L  D  P  S  
                    Query_10385  94   TGGAGTGGATGGGATACATCTATCACGTTGAGAGCACCTCCCGCAACCCGTCCCTCAAGAGTCAACTTACCATTTCACTCGACCCGTCTA  183
V  85.5% (213/249)  IGHV4-31*01  140  ..........T..G.........T..AG..G........A.TA....................T.G.......A...G.A...A......  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  S  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  S  T  G  R  I  
                    Query_10385  184  AGAGCCAGTTCTCCCTAAAACTGACCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCACATAGTACTGGCCGAATCA  273
V  85.5% (213/249)  IGHV4-31*01  230  ...A............G..G....G....G.......................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-22*01  12   ------------------------------------------------------------------------......G...--------  21

                                      ------->                                  
                                      I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10385  274  TTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ4*02     7    .......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_147069

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           338     4e-95
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	N/A	GAGCGAGGGCCTGCCTGGCACAC	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAGCGAGGGCCTGCCTGGCACACTGCTTTTGATATC	AERGPAWHTAFDI	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	228	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10386  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTCGTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.0% (228/240)  IGHV4-59*08  49   ...........................................G..AC.......G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  N  S  G  N  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10386  91   TGGATTGGGTATATCTTTAACAGTGGGAACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.0% (228/240)  IGHV4-59*08  139  ................A.T.........G.......................A.....................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  E  R  G  P  A  W  H  T  A  F 
                    Query_10386  181  CAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTATATTATTGTGCGGAGCGAGGGCCTGCCTGGCACACTGCTTTT  270
V  95.0% (228/240)  IGHV4-59*08  229  ..............G....G...........................G.....C......------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
J  100.0% (47/47)   IGHJ3*02     4    -----------------------------------------------------------------------------------.......  10

                                      ----->                                  
                                       D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10386  271  GATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  310
J  100.0% (47/47)   IGHJ3*02     11   ........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_339123

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           360     1e-101
IGHD2-21*02                                                                                           12.2    31    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	A	GGTGAC	GGGATGCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAAGGTGACGGGATGCATTTTGACTCC	AKEGDGMHFDS	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  G  S  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10387  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGCTTCAGTGGTTCTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-33*03  47   ....................................C.......A.C.A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  M  W  S  D  G  S  N  K  F  Y  A  D  S  V  K  G  R  F  N  I  S  R  D  N  S  
                    Query_10387  91   AGTGGGTGGCAGTTATGTGGTCTGATGGAAGTAATAAATTCTATGCAGACTCTGTGAAGGGCCGATTCAACATCTCCAGAGACAACTCCA  180
V  96.0% (240/250)  IGHV3-33*03  137  ................A....A.................A............C................C....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  E  G  D  G  M  H  F  
                    Query_10387  181  AGAACACGCTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAAAGAAGGTGACGGGATGCATTTTG  270
V  96.0% (240/250)  IGHV3-33*03  227  ..........G...........................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-21*02  14   -----------------------------------------------------------------------......-------------  19
J  97.4% (38/39)    IGHJ4*02     6    --------------------------------------------------------------------------------------....  9

                                      ---->                              
                                      D  S  W  G  Q  G  T  L  V  T  V  S 
                    Query_10387  271  ACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCC  305
J  97.4% (38/39)    IGHJ4*02     10   ...A...............................  44


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_339122

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           396     2e-112
IGHD3-3*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GG	TTACGATTTTTGGAGTGGTT	TCAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTTACGATTTTTGGAGTGGTTTCAGACTTTGACTAC	ARVTIFGVVSDFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	270	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T  C  H 
                    Query_10388  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTACCTGCCAC  91
V  94.1% (270/287)  IGHV1-18*04  7    ............................................................................C.......A..T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  T  D  G  N  T  H  Y  A  H 
                    Query_10388  92   GGTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTACCGATGGGAACACACACTATGCACAC  181
V  94.1% (270/287)  IGHV1-18*04  97   .......G.......................................................TA.A....T......A..........G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  V  R  G  R  V  T  L  T  T  D  S  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10388  182  AACGTCCGGGGCAGAGTCACCTTGACCACAGACTCATCCACGAGCACCGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.1% (270/287)  IGHV1-18*04  187  ..GC...A.............A...........A.............A..........................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       G  Y  Y  C  A  R  V  T  I  F  G  V  V  S  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10388  272  GGGTATTACTGTGCGAGGGTTACGATTTTTGGAGTGGTTTCAGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  94.1% (270/287)  IGHV1-18*04  277  .T...............-----------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                          
D  100.0% (20/20)   IGHD3-3*01   4    -------------------....................-------------------------------------------------  23
J  100.0% (45/45)   IGHJ4*02     4    -------------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_246089

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD6-25*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAGG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTC	ARQSSAGRTRYGMDV	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	71	3	0	95.9
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	108	6	0	94.7
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	295	278	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  
                    Query_10389  5    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATTCGACTTTACCG  94
V  94.2% (278/295)  IGHV5-51*01  2    ..G.....................................C.............................T.......A.AG.......A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  V  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_10389  95   ACTACTGGATCGTCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACGAGATACA  184
V  94.2% (278/295)  IGHV5-51*01  92   G...........G..............T......................................................C.......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  G  L  K  A  S  D  
                    Query_10389  185  GTCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACA  274
V  94.2% (278/295)  IGHV5-51*01  182  .C...............................C.............A.......................A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  F  C  A  R  Q  S  S  A  G  R  T  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_10389  275  CCGCCATGTATTTTTGTGCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCT  364
V  94.2% (278/295)  IGHV5-51*01  272  ............AC...........-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD6-25*01  7    --------------------------.......---------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -----------------------------------------------...........................................  57

                                           
                                      S  S 
                    Query_10389  365  CGTCA  369
J  97.9% (47/48)    IGHJ6*02     58   .C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_246088

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           372     2e-105
IGHD3-10*01                                                                                           21.8    0.040 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTATCGA	TTCGGGGAGTT	CCCCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTATCGATTCGGGGAGTTCCCCTCTTGACTAC	ARDLIDSGSSPLDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10390  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.6% (244/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  S  Y  I  Y  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  A  
                    Query_10390  91   AGTGGGTCTCATCCATTAGTAGTACCAGTAGCTACATTTACTACGCAGACTCAGTGACGGGCCGCTTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (244/250)  IGHV3-21*01  137  ........................GT.....T.....A...................A......A.........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  I  D  S  G  S  
                    Query_10390  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCTTATCGATTCGGGGAGTT  270
V  97.6% (244/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-10*01  13   -------------------------------------------------------------------------------...........  23

                                      ------------->                                  
                                      S  P  L  D  Y  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_10390  271  CCCCTCTTGACTACTGGGGCCAGGGAACCCTGGCCACCGTCTCCTCAG  318
J  97.6% (41/42)    IGHJ4*02     7    ------...........................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_246087

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           380     1e-107
IGHD1-26*01                                                                                           23.8    0.012 
IGHJ5*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGTATGCCGGCC	TGGGAGCTACTA	GT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTATGCCGGCCTGGGAGCTACTAGTTGGTTCGACCCC	AKYAGLGATSWFDP	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	265	22	0	92.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  N  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  S
                    Query_10391  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGAATCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTC  90
V  92.3% (265/287)  IGHV5-51*01  6    .............................A.............TC....................G....................G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  E  R  Q  M  P  G  K  G  L  E  W  M  G  F  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_10391  91   CTGGATCGCCTGGGAGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGTTCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  92.3% (265/287)  IGHV5-51*01  96   ........G.....T.....................C...............A....C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  A  T  I  S  A  G  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  W  A  T  A
                    Query_10391  181  TTCCTTCGAAGGCCAGGCCACCATCTCAGCCGGCAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTGGGCCACCGC  270
V  92.3% (265/287)  IGHV5-51*01  186  G......C.........T..............A............C...........G......A...............C..A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  K  Y  A  G  L  G  A  T  S  W  F  D  P  G  G  Q  G  T  L  V  I  V  S  S  
                    Query_10391  271  CATATATTACTGTGCGAAGTATGCCGGCCTGGGAGCTACTAGTTGGTTCGACCCCGGGGGCCAGGGAACCCTAGTCATCGTCTCCTCAG  359
V  92.3% (265/287)  IGHV5-51*01  276  ...G.............------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                          
D  100.0% (12/12)   IGHD1-26*01  8    -----------------------------............------------------------------------------------  19
J  93.5% (43/46)    IGHJ5*02     6    -------------------------------------------............T................G....C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_246086

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TAGAGAGGTCCGCATTGA	TAGTGCTTATTAC	GAGGGACCTCC	TGACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAGAGAGGTCCGCATTGATAGTGCTTATTACGAGGGACCTCCTGACAAC	ASREVRIDSAYYEGPPDN	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	230	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  D  H  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_10392  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTGATCACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.9% (230/245)  IGHV4-4*02   49   ..................G............G.............AG.A.........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  T  G  S  T  N  Y  N  P  S  L  G  G  R  V  S  I  S  V  D  K  S  K 
                    Query_10392  91   GAGTGGATAGGGGAAATCTATCATACTGGGAGCACCAACTACAACCCGTCCCTCGGGGGTCGAGTCTCCATATCAGTAGACAAGTCCAAG  180
V  93.9% (230/245)  IGHV4-4*02   139  ........T................G............................AA.A........A.......................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                       N  Q  F  S  L  I  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  V  R  I  D  S  A 
                    Query_10392  181  AACCAGTTCTCCCTGATACTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGTAGAGAGGTCCGCATTGATAGTGCT  270
V  93.9% (230/245)  IGHV4-4*02   229  ................AG.....C.........................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  92.3% (12/13)    IGHD3-22*01  16   -----------------------------------------------------------------------------------.....G.  22

                                      GT--------------------->                                  
                                       Y  Y  E  G  P  P  D  N  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10392  271  TATTACGAGGGACCTCCTGACAACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  328
D  92.3% (12/13)    IGHD3-22*01  23   ......----------------------------------------------------  28
J  95.1% (39/41)    IGHJ4*02     8    -----------------....T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_246085

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           353     9e-100
IGHD1-26*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAGA	TCGGTTT	TATAGTGGGACCTACT	CT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCTCAGATCGGTTTTATAGTGGGACCTACTCTTTTGCCTTC	TSDRFYSGTYSFAF	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	241	15	0	94.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  P  S  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10393  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGACCCAGTTTCAGCAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.1% (241/256)  IGHV3-15*01  47   .......T.............C..........TT..C......T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  I  D  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_10393  91   AGTGGGTTGGCCGTATTAAAAGCAAAATTGATGGTGAGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  94.1% (241/256)  IGHV3-15*01  137  ...........................C........G.....................................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  K  T  L  Y  L  H  M  N  G  L  K  T  E  D  T  A  V  Y  Y  C  T  S  D  R  F  Y  S  
                    Query_10393  181  ATTCAAAAAAAACGCTATATCTGCACATGAACGGCCTGAAAACCGAGGACACAGCCGTTTACTACTGTACCTCAGATCGGTTTTATAGTG  270
V  94.1% (241/256)  IGHV3-15*01  227  ..........C.....G........A......A.........................G..T.........A....--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  93.8% (15/16)    IGHD1-26*01  3    -----------------------------------------------------------------------------------.......  9

                                      IMGT--------------->                                  
                                      G  T  Y  S  F  A  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10393  271  GGACCTACTCTTTTGCCTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  93.8% (15/16)    IGHD1-26*01  10   ...G.....---------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -----------....A..A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_246083

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*02                                                                                           327     9e-92
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCATAAAGAGTGGTC	TGATAATAGTG	AAGGTCCCCCAC	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATAAAGAGTGGTCTGATAATAGTGAAGGTCCCCCACACTAT	AKDHKEWSDNSEGPPHY	230	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	112	2	0	98.2
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	217	8	0	96.4


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  N  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  W  Y  D
                    Query_10394  13   GTCTGGATTCACCTTCAATTCCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCGCTTATATGGTATGA  102
V  96.4% (217/225)  IGHV3-30*02  72   .................G.AG......................................................AT.....C.......  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  F  I  R  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  E  N  T  L  Y  L  Q  M  N
                    Query_10394  103  TGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCGAGAACACGCTGTATCTGCAAATGAA  192
V  96.4% (217/225)  IGHV3-30*02  162  ................................................................A.........................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------------CDR3-IMGT-------------------->  
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  H  K  E  W  S  D  N  S  E  G  P  P  H  Y  W
                    Query_10394  193  CAGCCTGAGAGCTGAGGACACGGCTGTTTATTACTGTGCGAAAGATCATAAAGAGTGGTCTGATAATAGTGAAGGTCCCCCACACTATTG  282
V  96.4% (217/225)  IGHV3-30*02  252  ...........................G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                
D  90.9% (10/11)    IGHD3-22*01  10   ------------------------------------------------------------.....G.....-------------------  20
J  97.4% (38/39)    IGHJ4*02     10   -----------------------------------------------------------------------------------....C..  16

                                                                      
                                        G  Q  G  T  L  V  T  V  S  S  
                    Query_10394  283  GGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  314
J  97.4% (38/39)    IGHJ4*02     17   ................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_246082

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           18.0    0.69  
IGHJ3*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ATAGCGGGAACTACT	TATGTTAGAGACTC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGATCGGATAGCGGGAACTACTTATGTTAGAGACTCTGATGCTTTTGCTATC	GRDRIAGTTYVRDSDAFAI	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	106	8	0	93
CDR3-IMGT (germline)	291	298	8	7	1	0	87.5
Total	N/A	N/A	296	279	17	0	94.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  N 
                    Query_10395  3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTCAAT  92
V  94.3% (279/296)  IGHV1-18*01  1    .....T.................................................................T..............T.CC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  F  I  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 
                    Query_10395  93   AACTATGGTTTCATCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTAT  182
V  94.3% (279/296)  IGHV1-18*01  91   .G.......A...G............................................................................  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  K  G  R  F  T  M  T  T  D  T  S  T  S  T  A  S  V  E  L  R  S  L  R  S  D  D 
                    Query_10395  183  GCACAGAAATTCAAGGGCAGATTCACCATGACCACGGACACATCCACGAGCACAGCCTCCGTGGAGCTGAGGAGCCTGAGATCTGACGAC  272
V  94.3% (279/296)  IGHV1-18*01  181  ........GC..C........G.............A......................A.A.............................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  V  Y  Y  C  G  R  D  R  I  A  G  T  T  Y  V  R  D  S  D  A  F  A  I  W  G  Q  G  S 
                    Query_10395  273  ACGGCCGTGTATTACTGCGGGAGAGATCGGATAGCGGGAACTACTTATGTTAGAGACTCTGATGCTTTTGCTATCTGGGGCCAAGGGTCA  362
V  94.3% (279/296)  IGHV1-18*01  271  .................T.C......----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  86.7% (13/15)    IGHD1-26*01  4    ------------------------------....T....G.....---------------------------------------------  18
J  94.0% (47/50)    IGHJ3*02     1    -----------------------------------------------------------...........A................A..  31

                                                         
                                       M  V  T  A  S  S  
                    Query_10395  363  ATGGTCACCGCCTCTTCAG  381
J  94.0% (47/50)    IGHJ3*02     32   ..........T........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_246081

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           364     6e-103
IGHD2-15*01                                                                                           14.1    9.8   
IGHJ6*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGGGCTGCATC	TTGTAGCGGT	TCCAATTGCTACGACTTAGG	CGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGCTGCATCTTGTAGCGGTTCCAATTGCTACGACTTAGGCGGAATGGACGTC	ARRAASCSGSNCYDLGGMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	261	28	0	90.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  L  G  S  G  Y  S  F  V  K  Y
                    Query_10396  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCTGGGTTCTGGATACAGCTTTGTCAAATA  90
V  90.3% (261/289)  IGHV5-51*03  6    ..............................A..............................AA...................AC..GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  R  T  P  G  K  G  L  E  W  M  G  T  I  Y  P  S  D  S  D  T  R  Y  S  P
                    Query_10396  91   TTGGATTGCTTGGGTGCGCCGGACGCCCGGGAAAGGCCTGGAGTGGATGGGGACCATCTATCCGTCTGACTCTGATACCCGATACAGCCC  180
V  90.3% (261/289)  IGHV5-51*03  96   C.....C.GC..........A..T.............................T.........TGG.............A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  L  S  T  A  F  L  Q  W  S  S  L  G  A  S  D  S  A
                    Query_10396  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTCTCTCCACCGCCTTCCTGCAGTGGAGCAGCCTGGGGGCCTCGGACAGCGC  270
V  90.3% (261/289)  IGHV5-51*03  186  .............................C.........CA..AG........A...................AA...........C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        I  Y  Y  C  A  R  R  A  A  S  C  S  G  S  N  C  Y  D  L  G  G  M  D  V  W  G  R  G  T  T
                    Query_10396  271  CATTTATTACTGTGCGAGACGGGCTGCATCTTGTAGCGGTTCCAATTGCTACGACTTAGGCGGAATGGACGTCTGGGGCCGAGGGACCAC  360
V  90.3% (261/289)  IGHV5-51*03  276  ...G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  90.0% (9/10)     IGHD2-15*01  7    ------------------------------......T...--------------------------------------------------  16
J  91.3% (42/46)    IGHJ6*02     17   ------------------------------------------------------------...T................A.........  46

                                                      
                                        V  I  A  S  S 
                    Query_10396  361  GGTCATCGCCTCCTCA  376
J  91.3% (42/46)    IGHJ6*02     47   .....C..T.......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_246080

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           280     1e-77
IGHD3-10*01                                                                                           19.9    0.17 
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	CGCCTCAGCATGGAC	TGGTACGGGGAGT	CGAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGCCTCAGCATGGACTGGTACGGGGAGTCGACCTACTACTACTACGGGATGGACGTC	ARLSMDWYGESTYYYYGMDV	261	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	18	6	0	75
FR2-IMGT	75	125	51	40	11	0	78.4
CDR2-IMGT	126	146	21	18	3	0	85.7
FR3-IMGT	147	260	114	95	19	0	83.3
CDR3-IMGT (germline)	261	263	3	3	0	0	100
Total	N/A	N/A	263	221	42	0	84


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  V  S  L  T  C  S  V  S  G  D  S  M  S  R  H  Y  W  S  W  V  R  
                    Query_10397  1    CAGGACTGGTGAAGCCCTCGGAGACCGTGTCCCTCACCTGCAGTGTCTCTGGCGACTCCATGAGTAGGCACTATTGGAGTTGGGTTCGAC  90
V  84.0% (221/263)  IGHV4-59*08  26   ................T.........C...............C.........T.G......C.....TT....C.....C...A.C..G.  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  G  G  L  E  W  I  A  F  I  Y  Y  S  G  T  T  K  S  N  P  S  L  E  R  R  V  S  
                    Query_10397  91   AGCCCCCGGGAGGGGGACTGGAGTGGATTGCGTTCATCTACTACAGTGGGACTACCAAGTCCAATCCCTCCCTCGAGAGGCGCGTCTCCA  180
V  84.0% (221/263)  IGHV4-59*08  116  .......A..GAA.................G..AT.....T..........GC.....C.A...C.........A....T..A...A...  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  I  D  T  T  R  Y  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  L  
                    Query_10397  181  TATCAATAGACACGACCAGATATCAGTTCTCCCTGAAATTGAGGTCTGTGACCGCCGCAGACACGGCCATCTATTACTGCGCGCGCCTCA  270
V  84.0% (221/263)  IGHV4-59*08  206  .....G........T...AGA.C..............GC....C........................G.G........T...-------  288
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A        

                                      ----------------CDR3-IMGT------------------------>                                 
                                      S  M  D  W  Y  G  E  S  T  Y  Y  Y  Y  G  M  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_10397  271  GCATGGACTGGTACGGGGAGTCGACCTACTACTACTACGGGATGGACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  353
D  92.3% (12/13)    IGHD3-10*01  10   --------....T........--------------------------------------------------------------  22
J  96.6% (56/58)    IGHJ6*02     5    -------------------------...............T................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_111262

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           377     9e-107
IGHD3-10*01                                                                                           50.7    9e-11 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTT	GTATTACTATGGTTCGGGGAGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTGTATTACTATGGTTCGGGGAGTTATTCGGACTAC	ARSLYYYGSGSYSDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	245	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10398  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (245/249)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10398  91   CTGGAGTGGATTGGGCACATCTACTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTAACCATATCAGTAGACACGTCT  180
V  98.4% (245/249)  IGHV4-31*03  139  ...............T.......T............................................T.....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  Y  G  S 
                    Query_10398  181  AAGAACCAGTTCTCCCTGAAGCTGAGATCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGATCCTTGTATTACTATGGTTCG  270
V  98.4% (245/249)  IGHV4-31*03  229  ..........................C..........................................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (26/26)   IGHD3-10*01  1    --------------------------------------------------------------------------................  16

                                      ----------------->                                  
                                       G  S  Y  S  D  Y  W  G  Q  G  T  L  V  T  I  S  S  
                    Query_10398  271  GGGAGTTATTCGGACTACTGGGGCCAGGGAACCCTGGTCACCATCTCCTCAG  322
D  100.0% (26/26)   IGHD3-10*01  17   ..........------------------------------------------  26
J  97.5% (39/40)    IGHJ4*02     9    ------------..............................G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_111260

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           367     6e-104
IGHD3-16*01                                                                                           14.1    8.4   
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TC	TACGTTT	TGGCTGAGAGAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTACGTTTTGGCTGAGAGAATGATGCACTTGATATC	ARHLRFG*ENDALDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	243	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_10399  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.8% (243/251)  IGHV4-39*01  49   .........................................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10399  91   CTGGAGTGGATTGGGAGCATCTATTATAGTGGGAGCACCTACGACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCCGTTGACACGTCC  180
V  96.8% (243/251)  IGHV4-39*01  139  .................T........................T...............................A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  R  F  G  *  E 
                    Query_10399  181  AAGAATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGACATCTACGTTTTGGCTGAGAG  270
V  96.8% (243/251)  IGHV4-39*01  229  .....C.............A.......................................C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*01  11   -------------------------------------------------------------------------.......----------  17

                                      ----------------->                                  
                                       N  D  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10399  271  AATGATGCACTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  96.0% (48/50)    IGHJ3*02     1    --......TT..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_111266

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           316     2e-88
IGHD6-6*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10400  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.7% (225/248)  IGHV3-21*01  47   ............................T............AG...C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  G  
                    Query_10400  91   AGTGGGTCTCATCCATCAGTAGTAGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGGGACAACGGCA  180
V  90.7% (225/248)  IGHV3-21*01  137  ................T........T...AGT......T.C..C..A......G..A......................A.......C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_10400  181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  90.7% (225/248)  IGHV3-21*01  227  ....C..................AA...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10400  271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_111267

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           406     1e-115
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGGCA	AGTACCAGCTGCT	CAACCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGGCAAGTACCAGCTGCTCAACCCTGACTAC	ARAGKYQLLNPDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N  N  Y
                    Query_10401  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAACAACTA  90
V  94.8% (275/290)  IGHV1-69*01  6    ..................G................................................................G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  C  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  S  V  F  G  T  T  N  Y  A  Q
                    Query_10401  91   TGCTATCTGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCAGTGTCTTTGGTACAACAAACTACGCACA  180
V  94.8% (275/290)  IGHV1-69*01  96   .......A.....................................................CC.A...........G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  A  Y  M  E  L  S  S  R  T  S  E  D  T  A
                    Query_10401  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGCGCACAGCCTACATGGAGCTGAGTAGTCGGACATCTGAGGACACGGC  270
V  94.8% (275/290)  IGHV1-69*01  186  ...........................................A......................C..C.T..G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        L  Y  Y  C  A  R  A  G  K  Y  Q  L  L  N  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10401  271  CCTTTATTACTGTGCGAGAGCCGGCAAGTACCAGCTGCTCAACCCTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  356
V  94.8% (275/290)  IGHV1-69*01  276  .G.G................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (13/13)   IGHD2-2*01   14   --------------------------.............-----------------------------------------------  26
J  97.6% (40/41)    IGHJ4*02     8    ---------------------------------------------........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_111264

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            344     6e-97
IGHD6-13*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTGTAGA	AGCTGGT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTGTAGAAGCTGGTTTTGACGAC	ARLVEAGFDD	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10402  1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTGGATTCACCTTTAGTAGATACTGGATGAGTTGGGTCCGCCAGGCTCCAGGTAAGGGGCTGG  90
V  94.4% (234/248)  IGHV3-7*01   47   .....................C..C.....................C..T........C....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  H  D  G  S  E  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_10402  91   AGTGGGTGGCCAACATAAAACATGATGGAAGTGAGACATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  94.4% (234/248)  IGHV3-7*01   137  ...................G..A.............A.................................................G...  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  V  Q  M  N  S  L  R  V  D  D  T  G  V  Y  Y  C  A  R  L  V  E  A  G  F  D  
                    Query_10402  181  AGAACTCACTGTATGTGCAAATGAACAGCCTGAGAGTCGACGACACGGGTGTGTATTACTGTGCGAGACTTGTAGAAGCTGGTTTTGACG  270
V  94.4% (234/248)  IGHV3-7*01   227  ..............C.....................C...G.......C...................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-13*01  13   ----------------------------------------------------------------------------.......-------  19
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------......T  12

                                      ->                                  
                                      D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10402  271  ACTGGGGCCAGGGAACCCTGGTCACCGTGTCCTCAG  306
J  95.3% (41/43)    IGHJ4*02     13   ............................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_111265

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           392     2e-111
IGHD3-9*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACACCATACGCCGGGT	TTACGATCTTTTGACTGGT	CCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACACCATACGCCGGGTTTACGATCTTTTGACTGGTCCCTTGACTCC	ARGHHTPGLRSFDWSLDS	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  R  Y 
                    Query_10403  2    CAGCTGGTGCAGTCTGGAGGTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACGTTTAGCAGATAT  91
V  93.4% (270/289)  IGHV1-18*01  7    ...................C...G.....................................................C....C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  K  N  G  N  T  N  Y  A  Q 
                    Query_10403  92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTAAAAATGGTAACACAAATTACGCACAG  181
V  93.4% (270/289)  IGHV1-18*01  97   ........C....................................................C.T.C..............C..T......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  V  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  F  D  D  T  A 
                    Query_10403  182  AGGGTCCAGGGAAGAGTCACCATGACGACAGACACATCCACGAGTACAGCCTACATGGAGCTGCGGAGCCTGAGATTTGACGACACGGCC  271
V  93.4% (270/289)  IGHV1-18*01  187  .A.C.......C..............C.................C..................A............C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  F  C  A  R  G  H  H  T  P  G  L  R  S  F  D  W  S  L  D  S  W  G  Q  G  T  L  V  T 
                    Query_10403  272  GTGTATTTCTGTGCGAGAGGACACCATACGCCGGGTTTACGATCTTTTGACTGGTCCCTTGACTCCTGGGGCCAGGGAACCCTGGTCACC  361
V  93.4% (270/289)  IGHV1-18*01  277  .......A...........-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  94.7% (18/19)    IGHD3-9*01   4    ------------------------------------.......A...........-----------------------------------  22
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------......A.........................  38

                                                
                                       V  S  S  
                    Query_10403  362  GTCTCCTCAG  371
J  97.6% (41/42)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_111268

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           414     6e-118
IGHD3-16*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATTGCGGGGC	TTTGGGGGAGTTATCCTTA	AAGGAATG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATTGCGGGGCTTTGGGGGAGTTATCCTTAAAGGAATGGACTAC	ARGLRGFGGVILKGMDY	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	73	2	0	97.3
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	280	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  T  A  S  G  G  S  F  S 
                    Query_10404  2    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCACGGCTTCTGGAGGCAGCTTCAGC  91
V  94.9% (280/295)  IGHV1-69*06  1    .......................G...........................................A..............C.......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  V  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  S  P  I  F  G  T  T  N  Y 
                    Query_10404  92   GACTATGTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCAGCCCTATCTTTGGGACAACAAACTAC  181
V  94.9% (280/295)  IGHV1-69*06  91   AG.....C........................................................T............T...G........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  N  T  A  Y  M  E  L  S  S  L  T  S  D  D 
                    Query_10404  182  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACAAATACAGCCTACATGGAGTTGAGCAGCCTGACATCTGATGAC  271
V  94.9% (280/295)  IGHV1-69*06  181  ...............................................G.GC...............C............G......G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------------CDR3-IMGT-------------------->                     
                                       T  A  V  Y  Y  C  A  R  G  L  R  G  F  G  G  V  I  L  K  G  M  D  Y  W  G  Q  G  T  L  V 
                    Query_10404  272  ACGGCCGTGTATTACTGTGCGAGAGGATTGCGGGGCTTTGGGGGAGTTATCCTTAAAGGAATGGACTACTGGGGCCAGGGAACCCTGGTC  361
V  94.9% (280/295)  IGHV1-69*06  271  .........................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.7% (18/19)    IGHD3-16*01  15   ------------------------------------..............G....-----------------------------------  33
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------...........................  35

                                                   
                                       T  A  S  S  
                    Query_10404  362  ACCGCCTCCTCAG  374
J  97.5% (39/40)    IGHJ4*02     36   ....T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_41726

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           352     3e-99
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCGTGCTGTTA	ACTATGATAGTGGTG	ATTCCGGTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CGTGCTGTTAACTATGATAGTGGTGATTCCGGTTGGTACTTTGACTAC	RAVNYDSGDSGWYFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	241	113	109	4	0	96.5
Total	N/A	N/A	241	233	8	0	96.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10405  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACTTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.7% (233/241)  IGHV3-33*01  47   .....................................C.......G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  E  K  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10405  91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTGAAAAATACTATGCAGACTCCTTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.7% (233/241)  IGHV3-33*01  137  ................................A.T..................G....................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  R  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  R  A  V  N  Y  D  S  G  D  
                    Query_10405  181  AGCGCACACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGCCGTGCTGTTAACTATGATAGTGGTGATT  270
V  96.7% (233/241)  IGHV3-33*01  227  ..AA...G.....................................................-----------------------------  287
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                
D  93.3% (14/15)    IGHD3-22*01  6    ------------------------------------------------------------------------...........A...---  20

                                      T------------------>                                  
                                      S  G  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10405  271  CCGGTTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (46/46)   IGHJ4*02     3    --------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_331437

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            336     1e-94
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTTTG	ACTATGATAGTCGTGGCTTTTAC	AGACGTTCTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTTTGACTATGATAGTCGTGGCTTTTACAGACGTTCTAACTACTTTGACTTC	ARGFDYDSRGFYRRSNYFDF	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	104	10	0	91.2
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	230	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10406  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTACTAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.9% (230/245)  IGHV4-4*01   49   ..................G.....................GC.G......C.......................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  Q  Y  N  P  S  L  K  S  R  V  T  I  P  V  D  K  S  K 
                    Query_10406  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCCAGTACAACCCGTCACTCAAGAGTCGAGTCACGATACCAGTAGACAAGTCCAAG  180
V  93.9% (230/245)  IGHV4-4*01   139  ....................................A.C...........C.................C...T.................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------------CDR3
                                       N  Q  I  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  F  D  Y  D  S  R  G 
                    Query_10406  181  AACCAGATCTCCCTGAGGTTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGGCTTTGACTATGATAGTCGTGGC  270
V  93.9% (230/245)  IGHV4-4*01   229  ......T.........A.C....C...............................G.........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  87.0% (20/23)    IGHD3-22*01  6    -------------------------------------------------------------------------...........A....T  22

                                      -IMGT------------------------>                                  
                                       F  Y  R  R  S  N  Y  F  D  F  W  G  R  G  T  L  V  A  V  S  S  
                    Query_10406  271  TTTTACAGACGTTCTAACTACTTTGACTTCTGGGGCCGGGGAACCCTGGTCGCTGTCTCCTCAG  334
D  87.0% (20/23)    IGHD3-22*01  23   .A....----------------------------------------------------------  28
J  91.7% (44/48)    IGHJ4*02     1    ----------------............A........A.............A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_194919

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           311     4e-87
IGHD5-12*01                                                                                           18.0    0.61 
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGCGATGTATGAT	TATAGTGGC	ACAATATAT	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGCGATGTATGATTATAGTGGCACAATATATTGGTACTTCGATCTC	ARQAMYDYSGTIYWYFDL	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	225	26	0	89.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  M  S  S  R  T  Y  P  W  A  W  V  R  Q  P  P  R  K  G 
                    Query_10407  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATGAGTAGTAGGACCTACCCCTGGGCCTGGGTCCGCCAGCCCCCACGGAAGGGC  90
V  89.6% (225/251)  IGHV4-39*01  49   ...............................G......C..C.....T.GT...TA.....G....A..............G.......G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  N  T  G  R  T  Y  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10407  91   CTGGAGTGGATTGGGACCATCTATAACACTGGGAGGACCTACTACAGCCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCG  180
V  89.6% (225/251)  IGHV4-39*01  139  ................GT......T.T.G......C..........A.................................A........C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       N  N  Q  F  S  L  H  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  A  M  Y  D  Y  S 
                    Query_10407  181  AACAACCAGTTCTCCCTGCACCTGAACTCTGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACAAGCGATGTATGATTATAGT  270
V  89.6% (225/251)  IGHV4-39*01  229  ..G...............A.G....G...........................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD5-12*01  6    ------------------------------------------------------------------------------------......  11

                                      -IMGT--------------------->                                  
                                       G  T  I  Y  W  Y  F  D  L  W  G  R  G  S  L  V  A  V  S  S  
                    Query_10407  271  GGCACAATATATTGGTACTTCGATCTCTGGGGCCGTGGCTCCCTGGTCGCTGTCTCCTCAG  331
D  100.0% (9/9)     IGHD5-12*01  12   ...----------------------------------------------------------  14
J  95.9% (47/49)    IGHJ2*01     5    ------------...........................A........A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_85543

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           389     2e-110
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGAGCG	GCACTGGCTGGTA	TTTGGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGAGCGGCACTGGCTGGTATTTGGCCTAC	ARGSGTGWYLAY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	75	69	67	2	0	97.1
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	105	9	0	92.1
CDR3-IMGT (germline)	289	295	7	6	1	0	85.7
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  M  F  T  T  Y 
                    Query_10408  7    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCCAGGCTTCTGGTTACATGTTTACCACTTAC  96
V  93.1% (269/289)  IGHV1-18*04  7    ...................C........................................A...............CC.......GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  G  Y  N  G  N  T  K  Y  A  Q 
                    Query_10408  97   GGCATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGCTGGGATGGATCAGCGGCTACAATGGTAACACAAAGTATGCACAG  186
V  93.1% (269/289)  IGHV1-18*04  97   ..T..........................................A...............CT.................C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  D  R  V  T  L  T  I  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10408  187  AACCTCCAGGACAGAGTCACCCTGACCATAGACACATCTACGAGCACTGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  276
V  93.1% (269/289)  IGHV1-18*04  187  ..G.......G..........A......C.........C........A.....C....................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  G  S  G  T  G  W  Y  L  A  Y  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_10408  277  GTCTATTACTGTGCGCGAGGGAGCGGCACTGGCTGGTATTTGGCCTACTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  358
V  93.1% (269/289)  IGHV1-18*04  277  ..G............A...---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  92.3% (12/13)    IGHD6-19*01  8    -------------------------...G.........--------------------------------------------  20
J  97.4% (37/38)    IGHJ4*02     11   --------------------------------------------......................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_80179

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           322     2e-90
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10409  1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_10409  91   CTAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-61*08  139  ..G..................T..T................C.................G.......TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N 
                    Query_10409  181  AGGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAAC  270
V  91.2% (228/250)  IGHV4-61*08  229  .A.................A.....GC..........................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G..G.....G.  22

                                      3-IMGT----------------------->                                  
                                       C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10409  271  TGCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  86.4% (19/22)    IGHD2-15*01  23   ......----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_80176

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-10*01                                                                                           10.3    119  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCA	GGGGA	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCAGGGGATACTACGGTATGGACGTC	ARDGRGYYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_10410  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTATTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   .....................................................C.A.....G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  H  Y  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S 
                    Query_10410  91   CTGGAGTGGATTGGGAACATCCATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ...............T.....T...................C.................G........T.....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  E  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  R  G  Y  Y  G 
                    Query_10410  181  AAGAACCAGTTCTCCCTGGAGCTGACCTCTATGACAGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGATGGCAGGGGATACTACGGT  270
V  94.4% (237/251)  IGHV4-31*03  229  ..................A......G....G....T.................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------------.....---------  20
J  96.0% (48/50)    IGHJ6*02     12   ---------------------------------------------------------------------------------.........  20

                                      -------->                                
                                       M  D  V  W  G  Q  G  I  T  V  T  V  S  S
                    Query_10410  271  ATGGACGTCTGGGGCCAAGGGATTACGGTCACCGTCTCCTC  311
J  96.0% (48/50)    IGHJ6*02     21   ......................CC.................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_80177

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           389     2e-110
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGAGCG	GCACTGGCTGGTA	TTTGGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGAGCGGCACTGGCTGGTATTTGGCCTAC	ARGSGTGWYLAY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  M  F  T  T  Y 
                    Query_10411  2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCCAGGCTTCTGGTTACATGTTTACCACTTAC  91
V  93.1% (269/289)  IGHV1-18*04  7    ...................C........................................A...............CC.......GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  G  Y  N  G  N  T  K  Y  A  Q 
                    Query_10411  92   GGCATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGCTGGGATGGATCAGCGGCTACAATGGTAACACAAAGTATGCACAG  181
V  93.1% (269/289)  IGHV1-18*04  97   ..T..........................................A...............CT.................C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  D  R  V  T  L  T  I  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10411  182  AACCTCCAGGACAGAGTCACCCTGACCATAGACACATCTACGAGCACTGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  93.1% (269/289)  IGHV1-18*04  187  ..G.......G..........A......C.........C........A.....C....................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  G  S  G  T  G  W  Y  L  A  Y  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_10411  272  GTCTATTACTGTGCGCGAGGGAGCGGCACTGGCTGGTATTTGGCCTACTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  353
V  93.1% (269/289)  IGHV1-18*04  277  ..G............A...---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  92.3% (12/13)    IGHD6-19*01  8    -------------------------...G.........--------------------------------------------  20
J  97.4% (37/38)    IGHJ4*02     11   --------------------------------------------......................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_80174

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD1-26*01                                                                                           18.0    0.60 
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAACAGTTTGTTGGCACCTG	AGTGGGAGC	CTGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACAGTTTGTTGGCACCTGAGTGGGAGCCTGATGATGCTTTTGATATC	ARVNSLLAPEWEPDDAFDI	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  R  S  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10412  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGCAGAAGCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.5% (231/247)  IGHV4-4*02   49   ...............................G............T..T.A........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       K  W  I  G  E  I  Y  H  G  G  N  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  K  S  K 
                    Query_10412  91   AAGTGGATTGGGGAGATCTATCATGGTGGGAATACCAACTACAACCCGTCCCTCAAGAGTCGACTTACTATATCAGTAGACAAGTCCAAG  180
V  93.5% (231/247)  IGHV4-4*02   139  G.............A.........A......GC..............................G.C..C.....................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       N  Q  F  S  L  Q  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  S  L  L  A  P  E 
                    Query_10412  181  AACCAATTCTCCCTGCAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGAGAGTTAACAGTTTGTTGGCACCTGAG  270
V  93.5% (231/247)  IGHV4-4*02   229  .....G.........A.......C..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD1-26*01  6    ----------------------------------------------------------------------------------------..  7

                                      MGT----------------------->                                  
                                       W  E  P  D  D  A  F  D  I  W  G  Q  G  T  L  A  I  V  S  S  
                    Query_10412  271  TGGGAGCCTGATGATGCTTTTGATATCTGGGGCCAAGGGACATTGGCCATCGTCTCTTCAG  331
D  100.0% (9/9)     IGHD1-26*01  8    .......------------------------------------------------------  14
J  94.0% (47/50)    IGHJ3*02     1    -----------...............................A...T..C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_80175

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            16.1    2.3  
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGGGAGGCGG	TTACGATT	CTATCCTCGGT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGGAGGCGGTTACGATTCTATCCTCGGTCTACGACTACGCTATGGACGTC	ASGEAVTILSSVYDYAMDV	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	232	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  F  Y  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_10413  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  95.9% (232/242)  IGHV4-59*01  49   ...........................................G..A................................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  Y  Y  S  G  R  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_10413  91   TGGATTGGGTCTATTTATTACAGTGGGAGGACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCGTATCAGTTGACACGTCCAAGAAC  180
V  95.9% (232/242)  IGHV4-59*01  139  ..........A...C..............C....................................A.......A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  G  E  A  V  T  I  L  S  S 
                    Query_10413  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGCGGGGAGGCGGTTACGATTCTATCCTCG  270
V  95.9% (232/242)  IGHV4-59*01  229  ...................G.................................C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (8/8)     IGHD3-3*01   4    -------------------------------------------------------------------------........---------  11

                                      ----------------------->                                 
                                       V  Y  D  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10413  271  GTCTACGACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  327
J  96.4% (53/55)    IGHJ6*02     8    --....T......G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_80172

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           346     2e-97
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATGG	GGTTCGAGGA	CCCGCGACCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTTCGAGGACCCGCGACCGTTTTTGATATC	ARDGVRGPATVFDI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  N  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10414  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTAACTCTTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (232/243)  IGHV4-59*08  49   ........................................G....T...AC.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_10414  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTATAATCCCTCCCTTAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  95.5% (232/243)  IGHV4-59*08  139  ......................................C..C........C.....................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  V  R  G  P  A  T  V 
                    Query_10414  181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGATGGGGTTCGAGGACCCGCGACCGTT  270
V  95.5% (232/243)  IGHV4-59*08  229  ....................C........C.......................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD3-10*01  11   --------------------------------------------------------------------......G...------------  20
J  90.9% (40/44)    IGHJ3*02     7    -----------------------------------------------------------------------------------------.  7

                                      -------->                                  
                                       F  D  I  W   A  K  G  Q  R  S  S  S  L  Q 
                    Query_10414  271  TTTGATATCTGGG-CCAAGGGACAACGATCATCGTCTCTTCAG  312
J  90.9% (40/44)    IGHJ3*02     8    .............G...........T.G...C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_80173

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           406     1e-115
IGHD1-26*01                                                                                           10.3    132   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTTC	ARDLTWGYFDF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_10415  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  94.8% (275/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  F  A  Q 
                    Query_10415  92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTTTGCACAG  181
V  94.8% (275/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10415  182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (275/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  F  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10415  272  ATATACTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTTCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  94.8% (275/290)  IGHV1-18*01  277  G.G..T..............-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  95.7% (45/47)    IGHJ4*02     2    --------------------------------...........A..............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_80170

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           325     3e-91
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*01                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	ACGTAC	TTACTATGACAGTAGT	TCTTACCGCGAGGAGTATCCTTTTATCTTTATGATC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGGAACGTACTTACTATGACAGTAGTTCTTACCGCGAGGAGTATCCTTTTATCTTTATGATCGACTAC	VRERTYYDSSSYREEYPFIFMIDY	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10416  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTGATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-48*03  47   .....................................C......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  H  I  S  R  D  G  G  D  I  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_10416  91   AGTGGATTTCACACATTAGTAGGGATGGTGGTGACATTTACTACGCAGACTCTGTGAGGGGCCGCTTCACCATCTCCAGAGACAACGCCA  180
V  91.6% (229/250)  IGHV3-48*03  137  .....G.....T..........TAG....A..AC...A...................A......A.........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      N  N  S  L  L  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  V  R  E  R  T  Y  Y  D  S  
                    Query_10416  181  ACAACTCACTGCTTCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCTGTTTATTTCTGTGTGAGGGAACGTACTTACTATGACAGTA  270
V  91.6% (229/250)  IGHV3-48*03  227  .G.........TA............C...............................A.....C...A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.8% (15/16)    IGHD3-22*01  4    ----------------------------------------------------------------------------.........T....  17

                                      ----CDR3-IMGT------------------------------>                                  
                                      S  S  Y  R  E  E  Y  P  F  I  F  M  I  D  Y  W  G  H  G  T  L  V  T  V  S  S  
                    Query_10416  271  GTTCTTACCGCGAGGAGTATCCTTTTATCTTTATGATCGACTACTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  348
D  93.8% (15/16)    IGHD3-22*01  18   ..----------------------------------------------------------------------------  19
J  97.5% (39/40)    IGHJ4*01     9    --------------------------------------..............A.........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_80171

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAC	TATTACTATCGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTATTACTATCGTTCGGGGAGTTATTTTGACTAC	ARGHYYYRSGSYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_10417  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ...............................G.............................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10417  91   CTGGAGTGGATTGGACACATCTATTACAGCGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATTTCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ..............GT.............T............................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  Y  Y  Y  R  S 
                    Query_10417  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTATTACTATCGTTCG  270
V  97.6% (244/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.8% (23/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------.........G.....  16

                                      ----------------->                                  
                                       G  S  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10417  271  GGGAGTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  95.8% (23/24)    IGHD3-10*01  17   .........-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    ---------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_115019

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD5-18*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATAGTC	ATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATAGTCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	240	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10418  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.8% (240/243)  IGHV4-59*01  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  N  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10418  91   TGGATTGGGTATATCTACAACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (240/243)  IGHV4-59*01  139  .................TT.......................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D 
                    Query_10418  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATATAGTCATGGTTACGGAGGAGTTGAC  270
V  98.8% (240/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD5-18*01  13   ----------------------------------------------------------------------........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10418  271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_236596

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           318     6e-89
IGHD2-8*02                                                                                            18.0    0.60 
IGHJ5*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATTGTCGGTGTTGGC	TATTGCACTGGT	AGCAGTTGTTCCCCTCCGTCT	GACGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGTCGGTGTTGGCTATTGCACTGGTAGCAGTTGTTCCCCTCCGTCTGACGCC	ARIVGVGYCTGSSCSPPSDA	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  F  S  Y  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_10419  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGGTCCTTCAGTTATTACTACTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTGGAG  90
V  91.8% (223/243)  IGHV4-34*01  49   ..................G......A................GG............C...A.............A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  D  I  N  Q  S  G  S  T  N  Y  S  P  S  L  E  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_10419  91   TGGATTGGTGACATCAATCAAAGTGGAAGCACCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCATATCAATAGACACGTCGAAGAAC  180
V  91.8% (223/243)  IGHV4-34*01  139  ........G..A........T...................A..........A....................G..........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  K  S  L  A  A  A  D  T  A  V  Y  F  C  A  R  I  V  G  V  G  Y  C  T  G 
                    Query_10419  181  CAGTTCTCCCTGAAGCTGAAGTCTTTGGCCGCCGCGGACACGGCTGTCTATTTCTGTGCGAGAATTGTCGGTGTTGGCTATTGCACTGGT  270
V  91.8% (223/243)  IGHV4-34*01  229  ...................GC...G..A...................G....A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD2-8*02   5    ------------------------------------------------------------------------------.....T......  16

                                      GT------------------------>                                
                                       S  S  C  S  P  P  S  D  A  W  G  Q  G  T  L  V  T  V  S  S
                    Query_10419  271  AGCAGTTGTTCCCCTCCGTCTGACGCCTGGGGCCAGGGAACTCTGGTCACCGTCTCCTC  329
J  94.7% (36/38)    IGHJ5*02     12   ---------------------...C................C.................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_331431

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     8e-121
IGHD6-19*01                                                                                           16.1    2.5   
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGTGGGGAAACAGA	AGTGGCTG	CCA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCC	ARLRGETEVAANNWFDP	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	280	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  M  G  S  G  Y  T  F  V  G  Y
                    Query_10420  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTATGGGATCTGGATACACCTTTGTCGGCTA  90
V  96.9% (280/289)  IGHV5-51*03  6    ..............................................................A...T..........G....AC.A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_10420  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.9% (280/289)  IGHV5-51*03  96   ........G..............................................A..................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_10420  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (280/289)  IGHV5-51*03  186  .......................................C..................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  L  R  G  E  T  E  V  A  A  N  N  W  F  D  P  W  G  Q  G  T  L  V  T  V
                    Query_10420  271  CATGTATTACTGTGCGAGACTTCGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGT  360
V  96.9% (280/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD6-19*01  10   ------------------------------------........----------------------------------------------  17
J  100.0% (50/50)   IGHJ5*02     1    -----------------------------------------------...........................................  43

                                             
                                        S  S 
                    Query_10420  361  CTCCTCA  367
J  100.0% (50/50)   IGHJ5*02     44   .......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_115011

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10421  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_10421  91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_10421  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10421  271  AACTACTTTGACTACTGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  319
J  97.9% (47/48)    IGHJ4*02     1    -............................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_115010

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           360     1e-101
IGHD5-12*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGGGAAGG	GGATCTAGTGCCGACGATT	T	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGGGAAGGGGATCTAGTGCCGACGATTTCTTTGACCTC	AREGGRGSSADDFFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10422  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-21*01  47   ...................................................G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  L  S  S  S  G  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  S  D  N  F  
                    Query_10422  91   AGTGGGTCTCATCGCTTAGTAGTAGTGGTAGTTACATTTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGCGACAACTTCA  180
V  96.0% (240/250)  IGHV3-21*01  137  .............CA...........A..........A.........................................A......GC..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  G  G  R  G  S  S  
                    Query_10422  181  AGAATTCACTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGGGGGGAAGGGGATCTAGTG  270
V  96.0% (240/250)  IGHV3-21*01  227  ....C.......A.........................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.2% (16/19)    IGHD5-12*01  3    --------------------------------------------------------------------------------....A.....  12

                                      T------------------>                                  
                                      A  D  D  F  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10422  271  CCGACGATTTCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  84.2% (16/19)    IGHD5-12*01  13   G.T......---------------------------------------------  21
J  95.5% (42/44)    IGHJ4*02     5    ----------.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_115013

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*03                                                                                           341     5e-96
IGHD2-8*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*03	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCCTGG	ATTGCACTGATGGTGTCTGTTAT	GCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATCGCCTGGATTGCACTGATGGTGTCTGTTATGCTTTTGACCAA	VKDRLDCTDGVCYAFDQ	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         F  L  R  L  S  C  S  A  S  G  F  T  F  S  N  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10423  1    GGTTCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACATTCAGTAACTATGCTATGCACTGGGTCCGCCAGGCTCCTGGGAAGGGACTGG  90
V  93.6% (234/250)  IGHV3-64*03  47   ...C.................................C.......G..............................A.............  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  P  N  G  G  S  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10423  91   AATATGTTTCAGCGATTAGTCCTAATGGAGGTAGTACATACTTCGCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-64*03  137  .............T......AG......G.....C.......A...............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  D  R  L  D  C  T  D  
                    Query_10423  181  GGAACACTCTATATCTCCAAATGAGCAGTCTGAGAGCTGAGGACACGGCTCTCTATTACTGTGTGAAAGATCGCCTGGATTGCACTGATG  270
V  93.6% (234/250)  IGHV3-64*03  227  A......G..G...G...................................G.G.................--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  82.6% (19/23)    IGHD2-8*01   6    ------------------------------------------------------------------------------....T...A...  17

                                      GT-------------------->                                  
                                      G  V  C  Y  A  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10423  271  GTGTCTGTTATGCTTTTGACCAATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  82.6% (19/23)    IGHD2-8*01   18   ....A..C...----------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    --------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_115012

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     5e-96
IGHD6-13*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTGG	GCAGCAG	GTGAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTGGGCAGCAGGTGACTGACTAT	ARDSGQQVTDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  N  Y  G  M  K  W  V  R  Q  A  P  G  R  G  L  
                    Query_10424  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTCAGTAACTATGGCATGAAATGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  93.6% (234/250)  IGHV3-21*01  47   ....................................CC.......G....A.......C......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  G  S  D  Y  I  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10424  91   AGTGGGTCTCATCCATTAGTAGTGGTAGTGATTACATATACTACGTAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.6% (234/250)  IGHV3-21*01  137  .......................A.....AG..............C............................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      R  N  S  V  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  S  G  Q  Q  V  T  
                    Query_10424  181  GGAACTCAGTGTTTCTACAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTATATTACTGTGCGAGAGATTCTGGGCAGCAGGTGACTG  270
V  93.6% (234/250)  IGHV3-21*01  227  A.......C...A...G...................C...............G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-13*01  8    ----------------------------------------------------------------------------.......-------  14
J  87.8% (36/41)    IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  P  *  T  Q  V  S  V  S  S  
                    Query_10424  271  ACTATTGGGGCCCGTGAACCCAGGTCTCCGTCTCCTCAG  309
J  87.8% (36/41)    IGHJ4*02     10   ....C.......A.G......T....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_236594

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           336     1e-94
IGHD3-9*01                                                                                            18.0    0.58 
IGHJ3*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCCCGG	GACGGGTTATTA	C	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCCCGGGACGGGTTATTACGATGGTTTTGAAATC	AREPGTGYYDGFEI	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	126	24	19	5	0	79.2
FR3-IMGT	127	240	114	111	3	0	97.4
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  P  E  
                    Query_10425  2    CCCTGTCCCTCACCTGCGCAGCCTCTGGATTCACCTTCAGCAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGCAAGGGGCCGGAGT  91
V  93.5% (231/247)  IGHV3-48*03  50   .....AGA...T....T.......................T...................................G.......T.....  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  Y  I  S  T  G  G  T  I  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  R  
                    Query_10425  92   GGGTTTCATACATTAGTACTGGTGGTACTATCAAATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAGGA  181
V  93.5% (231/247)  IGHV3-48*03  140  ..................G.A......G..C..T.....................................................A..  229
                                      W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  S  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  P  G  T  G  Y  Y  D  
                    Query_10425  182  ACTCACTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGCGAGAGAGCCCGGGACGGGTTATTACGATG  271
V  93.5% (231/247)  IGHV3-48*03  230  .........A.....................................G...................-----------------------  296
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  91.7% (11/12)    IGHD3-9*01   16   -------------------------------------------------------------------------...T........-----  27
J  93.9% (46/49)    IGHJ3*02     2    --------------------------------------------------------------------------------------....  5

                                      ---------->                                  
                                      G  F  E  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10425  272  GTTTTGAAATCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  316
J  93.9% (46/49)    IGHJ3*02     6    C......T..................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_236595

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            352     3e-99
IGHD4-17*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGCAGCCTTA	GACTACGGTG	CTAAGAGGCTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCGCAGCCTTAGACTACGGTGCTAAGAGGCTTTTTGACTAC	VRGAALDYGAKRLFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10426  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTTTTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-7*03   47   ..............................................C.A.........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  A  G  S  E  E  S  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_10426  91   AGTGGGTGGCCAACATAAAGCAAGCTGGAAGTGAGGAGTCCTATGTGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (237/249)  IGHV3-7*03   137  ........................A..........A.A.A.................A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  V  R  G  A  A  L  D  Y  G  
                    Query_10426  181  AGAACTCACTGTATCTCCAAATGAACACCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGTGAGAGGCGCAGCCTTAGACTACGGTG  270
V  95.2% (237/249)  IGHV3-7*03   227  ................G..........G........................G..........C.....---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD4-17*01  2    --------------------------------------------------------------------------------..........  11

                                      T------------------>                                  
                                      A  K  R  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10426  271  CTAAGAGGCTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (43/43)   IGHJ4*02     6    -----------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_90905

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           449     3e-128
IGHD6-6*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	GTATAGCAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTATAGCAGCTCGTCCTTGGTCTGACTAC	ARGIAARPWSDY	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	73	1	0	98.6
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	114	0	0	100
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	290	3	0	99


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_10427  4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  93
V  99.0% (290/293)  IGHV5-51*03  2    ..G.......................................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  F  W  L  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_10427  94   GCTTCTGGCTCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  183
V  99.0% (290/293)  IGHV5-51*03  92   ...A....A.................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_10427  184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  99.0% (290/293)  IGHV5-51*03  182  ..........................................................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  M  Y  Y  C  A  R  G  I  A  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10427  274  CCGCCATGTATTACTGTGCGAGAGGTATAGCAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  99.0% (290/293)  IGHV5-51*03  272  .......................----------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                 
D  100.0% (16/16)   IGHD6-6*01   3    ------------------------................-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_113520

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           300     8e-84
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	TCTACAGTGCGGGGCGC	TGGCTGGT	GGCCGGTTGGGTACAT	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	19	5	0	79.2
FR3-IMGT	123	236	114	106	8	0	93
CDR3-IMGT (germline)	237	242	6	5	1	0	83.3
Total	N/A	N/A	230	211	19	0	91.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  T  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  H  I  
                    Query_10428  13   GTGCAGCGTCTGGATTCACCTTCAGTACCTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGGAGTGGGTGGCACATATTT  102
V  91.7% (211/230)  IGHV3-33*01  65   ...........................G..A....................................G...............GT...A.  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      Y  Y  D  G  T  N  K  Y  Y  A  D  S  M  K  G  R  F  T  I  S  R  D  N  S  R  D  T  L  Y  L  
                    Query_10428  103  ACTATGATGGAACTAATAAGTATTATGCAGACTCCATGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGGATACCCTGTATCTGC  192
V  91.7% (211/230)  IGHV3-33*01  155  GG..........G......A..C............G....................................A.A.C..G..........  244
                                      W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      ------------------------------------------->                                              
                                      Q  M  N  S  L  R  V  E  D  T  A  M  Y  Y  C  V  R  S  T  V  R  G  A  G  W  W  P  V  G  Y  
                    Query_10428  193  AAATGAACAGCCTGAGAGTCGAGGACACGGCTATGTATTACTGTGTGAGATCTACAGTGCGGGGCGCTGGCTGGTGGCCGGTTGGGTACA  282
V  91.7% (211/230)  IGHV3-33*01  245  ..................C.............G............C....----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (8/8)     IGHD6-19*01  12   -------------------------------------------------------------------........---------------  19

                                                                  
                                      M  G  Q  G  T  L  V  T  V  S
                    Query_10428  283  TGGGCCAGGGAACCCTGGTCACCGTCTC  310
J  100.0% (27/27)   IGHJ4*02     17   -...........................  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_41720

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           316     2e-88
IGHD2-21*02                                                                                           14.1    8.4  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACGTA	TGGTGAC	CCTACACTCCCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACGTATGGTGACCCTACACTCCCATACTTTGACTCC	ARTYGDPTLPYFDS	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  M  S  S  G  G  Y  L  W  S  W  V  R  Q  Y  P  G  K  G 
                    Query_10429  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATGAGCAGTGGCGGTTATCTCTGGAGCTGGGTACGCCAGTACCCAGGGAAGGGC  90
V  90.7% (225/248)  IGHV4-31*03  49   ...............................G......C........T.....CTA..........A.C......C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  G  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S 
                    Query_10429  91   CTGGAGTGGATTGGGGGAATCTATTACAGTGGAACCACGTACTACAACCCGTCCCTCAGGAGTCGACTTACAATATCAGTAGACACTTCT  180
V  90.7% (225/248)  IGHV4-31*03  139  ...............TAC..............G.G...C...................A.......G....C..............G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       E  K  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  Y  G  D  P  T  L 
                    Query_10429  181  GAGAAACACTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTATTGTGCGAGGACGTATGGTGACCCTACACTC  270
V  90.7% (225/248)  IGHV4-31*03  229  A....C..G..................................................C........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD2-21*02  13   --------------------------------------------------------------------------.......---------  19

                                      -------------->                                  
                                       P  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10429  271  CCATACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  97.8% (45/46)    IGHJ4*02     3    ---..........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_243885

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD2-2*01                                                                                            39.1    3e-07
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACG	TTGTAGTAGTACCAGCTGCT	TTTACGAG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACGTTGTAGTAGTACCAGCTGCTTTTACGAGATGGACGTC	ARVRCSSTSCFYEMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  Q 
                    Query_10430  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGACTCCATCAATAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGCAG  90
V  95.9% (234/244)  IGHV4-59*01  49   .............................T.G........G....T.........................................G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  K  N  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10430  91   TGGATTGGCTATATCTATTACAGTGGGAGCACCAAGAACAACCCTTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.9% (234/244)  IGHV4-59*01  139  ........G..........................CT.......C.............................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  C  S  S  T  S  C  F 
                    Query_10430  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGTACGTTGTAGTAGTACCAGCTGCTTT  270
V  95.9% (234/244)  IGHV4-59*01  229  ...............................................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD2-2*01   7    --------------------------------------------------------------------....................--  26

                                      -------------->                                 
                                       Y  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10430  271  TACGAGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  100.0% (42/42)   IGHJ6*02     21   ------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_236590

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           10.3    131   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_10431  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  95.2% (276/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  F  A  Q 
                    Query_10431  92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTTTGCACAG  181
V  95.2% (276/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10431  182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10431  272  ATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  95.2% (276/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_91443

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            313     1e-87
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ6*01                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CGG	CTACGGTAACTAC	TTCGCT	GGTAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCGGCTACGGTAACTACTTCGCTGGTAGGGACGTC	AGYGNYFAGRDV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  E  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10432  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACGTTTGAGGATTATGCCATGCACTGGGTCCGCCAAGCCCCAGGGAAGGGCCTGG  90
V  91.0% (222/244)  IGHV3-9*01   47   ................................T....C.....T.......................G.....T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  R  I  S  W  T  S  G  T  I  D  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  D  T  
                    Query_10432  91   AGTGGGTCGCAAGGATTAGTTGGACGAGTGGAACTATAGACTATGCGGACTCTGTGAAGGGCCGATTCATCATCTCCAGAGACGACACCA  180
V  91.0% (222/244)  IGHV3-9*01   137  ........T..G.T..........AT.....T.GC....G.............................C.............A..G...  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  G  Y  G  N  Y  F  A  G  
                    Query_10432  181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGAGAGTTGAAGACACGGCCCTGTATTATTGTGCCGGCTACGGTAACTACTTCGCTGGTA  270
V  91.0% (222/244)  IGHV3-9*01   227  ..........G.........................C...G.........T.......C.....--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  92.3% (12/13)    IGHD4-17*01  4    -------------------------------------------------------------------.......G.....----------  16
J  87.0% (40/46)    IGHJ6*01     18   --------------------------------------------------------------------------------------....  21

                                      ------->                                  
                                      R  D  V  W  G  Q  G  T  T  A  I  V  S  S  
                    Query_10432  271  GGGACGTCTGGGGACAAGGGACGACGGCCATCGTCTCATCAG  312
J  87.0% (40/46)    IGHJ6*01     22   T............G........C....T..C......C....  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_194917

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           369     2e-104
IGHD2-15*01                                                                                           19.9    0.15  
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAG	TTGTAGTGGT	AACACCTG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGTTGTAGTGGTAACACCTGCTACTACGAAATGGACGTC	ARVSCSGNTCYYEMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	240	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10433  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (240/244)  IGHV4-59*01  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10433  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGGTAGACACGTCCAAGAAC  180
V  98.4% (240/244)  IGHV4-59*01  139  .......................................................................A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  S  C  S  G  N  T  C  Y 
                    Query_10433  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTTGCGGACACGGCCGTCTATTACTGTGCGAGAGTAAGTTGTAGTGGTAACACCTGCTAC  270
V  98.4% (240/244)  IGHV4-59*01  229  ...............................C...............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD2-15*01  7    --------------------------------------------------------------------..........------------  16
J  96.2% (50/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10433  271  TACGAAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  96.2% (50/52)    IGHJ6*02     15   ....GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_236591

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           371     6e-105
IGHD3-3*01                                                                                            14.1    8.3   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	241	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10434  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.4% (241/245)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_10434  91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.4% (241/245)  IGHV4-34*01  139  .........................................................................T................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  G  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_10434  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGGCACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  98.4% (241/245)  IGHV4-34*01  229  .....................................A.........G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10434  271  GCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_194916

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10435  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_10435  91   CTCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..G...............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G 
                    Query_10435  181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .........................G................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10435  271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_243888

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           308     4e-86
IGHD2-2*03                                                                                            14.1    8.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-2*03	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TGGGGAATA	TGGAAATTGT	TA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGTGGGGAATATGGAAATTGTTAACTACTTTGACGCC	VRVGNMEIVNYFDA	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	223	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10436  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACATTCAGTAGTTATTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  89.6% (223/249)  IGHV3-74*01  47   ............................T........C........C..C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  S  T  D  G  T  S  F  S  H  A  D  A  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_10436  91   TGTGGGTCTCACGTATTAGCACTGATGGGACTAGTTTCAGCCACGCGGACGCCGTGAGGGGCCGATTCACCATTTCCAGAGACAATGCCA  180
V  89.6% (223/249)  IGHV3-74*01  137  ..................AT.G........G...CACA...T........T......A...............C...........C....  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  F  L  Q  M  D  N  L  R  A  E  D  T  A  V  Y  Y  C  V  R  V  G  N  M  E  I  V  
                    Query_10436  181  AGAACACCCTCTTTTTGCAAATGGACAATTTGAGAGCCGAGGACACGGCTGTGTATTACTGCGTAAGAGTGGGGAATATGGAAATTGTTA  270
V  89.6% (223/249)  IGHV3-74*01  227  .......G..G.A.C........A...G.C...............................T.C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD2-2*03   1    ------------------------------------------------------------------------------....T.....--  10

                                      ------------->                                  
                                      N  Y  F  D  A  W  G  Q  G  N  L  V  T  V  S  S  
                    Query_10436  271  ACTACTTTGACGCCTGGGGCCAGGGAAACCTGGTCACCGTCTCCTCAG  318
J  93.8% (45/48)    IGHJ4*02     1    ...........TA..............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_115148

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            414     5e-118
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CACA	TACTATCCTTCGGGGAGTT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATACTATCCTTCGGGGAGTTTACTACGGTATGGACGTC	ARAHTILRGVYYGMDV	273	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	30	0	0	100
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	24	3	0	88.9
FR3-IMGT	159	272	114	112	2	0	98.2
CDR3-IMGT (germline)	273	279	7	6	1	0	85.7
Total	N/A	N/A	279	272	7	0	97.5


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  M  S  G  D  S  V  S  S  N  S  A  A  W  N  W  
                    Query_10437  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATGTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGA  90
V  97.5% (272/279)  IGHV6-1*01   26   ..............................................C...........................................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  R  W  Y  T  D  Y  A  V  S  V  K  
                    Query_10437  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCGAGGTGGTATACTGATTATGCAGTCTCTGTGAAAA  180
V  97.5% (272/279)  IGHV6-1*01   116  .......................................................C.A........A............A..........  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_10437  181  GTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTCTATTACT  270
V  97.5% (272/279)  IGHV6-1*01   206  ..................................................................................G.......  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-------------------CDR3-IMGT------------------>                                 
                                      C  A  R  A  H  T  I  L  R  G  V  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10437  271  GTGCGAGAGCACATACTATCCTTCGGGGAGTTTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  353
V  97.5% (272/279)  IGHV6-1*01   296  ....A....--------------------------------------------------------------------------  304
                                      C  A  R                                                                            
D  89.5% (17/19)    IGHD3-10*01  5    -------------......GG...........---------------------------------------------------  23
J  100.0% (51/51)   IGHJ6*02     12   --------------------------------...................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_243889

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           308     4e-86
IGHD6-19*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGTGGC	CAGTGGC	CGGCGGAATAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTGGCCAGTGGCCGGCGGAATATTACTTTGACTTC	ARDGGQWPAEYYFDF	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	224	27	0	89.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  G  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_10438  1    ACCCTGTCCCTCACCTGCAGTGTTTCTGGTGGCTCCATCAGCGGTAGCAGTTACTACTGGGGCTGGATCCGCCAGCCCCCCGGGAAGGGC  90
V  89.2% (224/251)  IGHV4-39*02  49   ...................C...C..................A....T................................A........G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  V  Y  Y  S  G  T  T  H  D  N  P  S  L  K  S  R  V  T  L  S  V  D  T  S 
                    Query_10438  91   CTAGAGTGGATTGGGAGTGTCTACTATAGTGGGACCACTCACGACAACCCGTCCCTCAAGAGTCGCGTCACCCTGTCCGTTGACACGTCC  180
V  89.2% (224/251)  IGHV4-39*02  139  ..G...............A....T..........G...CT..T......................A......A.A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  G  L  Y  F  C  A  R  D  G  G  Q  W  P  A 
                    Query_10438  181  AAGAACCAGTTCTCCCTGAGGCTGAACTCTGTCACCGCCGCAGACACGGGTCTATACTTTTGTGCGAGAGATGGTGGCCAGTGGCCGGCG  270
V  89.2% (224/251)  IGHV4-39*02  229  ........C..........A.....G......G................C.G.G..T.AC...........-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD6-19*01  9    ------------------------------------------------------------------------------.......-----  15

                                      ----------------->                              
                                       E  Y  Y  F  D  F  W  G  Q  G  K  L  V  V  V  S 
                    Query_10438  271  GAATATTACTTTGACTTCTGGGGCCAGGGAAAGCTGGTCGTCGTCTCC  318
J  88.1% (37/42)    IGHJ4*02     3    ------..........A..............CC......AC.......  44


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_63985

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           294     6e-82
IGHD6-25*01                                                                                           12.2    31   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-25*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGTA	GGTTTCCTGG	GCATCGGCT	GAGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCTGGGCATCGGCTGAGGGGTGGTTCGACCCC	SWASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	238	110	95	15	0	86.4
Total	N/A	N/A	238	213	25	0	89.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  S  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10439  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACGTTGAGTAGTTCTGGGATGCACTGGGTCCGCCAGGCTCCCGGCAAGGGGCTGG  90
V  89.5% (213/238)  IGHV3-33*03  47   .....................................C..C.....C.A...C.......................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  K  N  Y  Y  V  D  S  V  K  G  R  T  T  I  S  R  N  D  S  
                    Query_10439  91   AGTGGGTGGCCGTTATATGGTATGATGGAATTAAAAACTACTATGTAGACTCCGTGAAGGGCCGAACCACCATCTCCAGAAACGACTCCA  180
V  89.5% (213/238)  IGHV3-33*03  137  ..........A...................G...T..A.......C...................TT.............G..A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  L  H  S  L  S  A  E  G  T  A  L  *  *  V  S  W  A  S  A  E  G  W  F  
                    Query_10439  181  AGAACACCCTGTTTCTGCAGCTGCACAGCCTGAGCGCCGAGGGCACGGCTCTTTAGTAGGTTTCCTGGGCATCGGCTGAGGGGTGGTTCG  270
V  89.5% (213/238)  IGHV3-33*03  227  .......G....A......AA..A..........A.......A.......G.G..T..--------------------------------  284
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y                                   
D  88.9% (8/9)      IGHD6-25*01  8    --------------------------------------------------------------------...G.....-------------  16
J  100.0% (46/46)   IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10439  271  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (46/46)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_39965

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           347     7e-98
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTAC	AEEKRRVPRGTFHY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  G  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10440  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAATGGCTATGCCATACACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-23*01  47   .........................C..............T.GCA..........GAG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  T  S  G  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  
                    Query_10440  91   AGTGGGTCTCAGCCACTAGTGGTGGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGA  180
V  94.4% (236/250)  IGHV3-23*01  137  .............T.T.......A......................................................G.........C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  
                    Query_10440  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGG  270
V  94.4% (236/250)  IGHV3-23*01  227  .................................................................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------------------------......------------  17

                                      ------------->                                  
                                      G  T  F  H  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_10440  271  GAACCTTTCACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  318
J  95.5% (42/44)    IGHJ4*02     5    ----....G.................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_39964

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           371     7e-105
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	ARPSSASGWHFDN	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	263	26	0	91


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_10441  1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCAGTTA  90
V  91.0% (263/289)  IGHV5-51*03  6    .........................G.............G.........................G.........C.GC..T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  D  I  R  Y  S  P
                    Query_10441  91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGATATTAGATATAGTCC  180
V  91.0% (263/289)  IGHV5-51*03  96   C.......G..................................................AT...GG...........CC.....C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  G
                    Query_10441  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACCCCGG  270
V  91.0% (263/289)  IGHV5-51*03  186  .............................C..A.AA........G........................................A...C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        L  Y  Y  C  A  R  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10441  271  CTTGTATTACTGTGCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  91.0% (263/289)  IGHV5-51*03  276  .A.................-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_103421

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            389     2e-110
IGHD6-19*01                                                                                           21.8    0.045 
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACC	GGGTGTAGCAATGGCTG	ATTTATC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAACCGGGTGTAGCAATGGCTGATTTATCCTATTACTACGGTCTGGACGTC	AREPGVAMADLSYYYGLDV	269	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	154	27	25	2	0	92.6
FR3-IMGT	155	268	114	110	4	0	96.5
CDR3-IMGT (germline)	269	276	8	8	0	0	100
Total	N/A	N/A	275	262	13	0	95.3


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  I  S  R  N  T  D  A  W  N  W  I  R 
                    Query_10442  2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTATCTCTCGCAACACTGATGCTTGGAACTGGATCAGG  91
V  95.3% (262/275)  IGHV6-1*01   31   ........G...T.G.......................................G.....A......G..C...................  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  K  S  K  W  Y  Y  D  Y  A  V  S  V  K  S  R 
                    Query_10442  92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAAGTCCAAGTGGTATTATGATTATGCAGTATCTGTGAAAAGTCGA  181
V  95.3% (262/275)  IGHV6-1*01   121  ..............................................G.............A.............................  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  H  L  S  S  V  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_10442  182  ATTACCATCAACCCCGACACATCCAAGAACCAGTTCTCCCTGCATCTGAGCTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCA  271
V  95.3% (262/275)  IGHV6-1*01   211  ..A...........A.............................G....A........................................  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      ---------------------CDR3-IMGT----------------------->                                 
                                       R  E  P  G  V  A  M  A  D  L  S  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10442  272  AGAGAACCGGGTGTAGCAATGGCTGATTTATCCTATTACTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  358
V  95.3% (262/275)  IGHV6-1*01   301  .....----------------------------------------------------------------------------------  305
                                       R                                                                                     
D  88.2% (15/17)    IGHD6-19*01  1    --------....A.....G......--------------------------------------------------------------  17
J  96.4% (53/55)    IGHJ6*02     8    --------------------------------...C.........A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_39966

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           347     7e-98
IGHD2-8*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CGACAGAGTGTTA	TATGCT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCAAAGACGACAGAGTGTTATATGCTTTTGACAAG	TKDDRVLYAFDK	249	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	239	17	0	93.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  R  N  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10443  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAGAAACTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.4% (239/256)  IGHV3-15*01  47   .......T............................CT..C..T...GCC........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  Q  G  R  F  T  I  S  R  D  
                    Query_10443  91   AGTGGGTTGGCCGTATTAAAAGTAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGCAAGGCAGATTCACCATCTCAAGAGATG  180
V  93.4% (239/256)  IGHV3-15*01  137  ......................C.......................................A...........................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------CDR3-IMG
                                      D  S  K  N  M  V  Y  L  Q  M  N  S  L  Q  T  E  D  T  A  V  Y  Y  C  T  K  D  D  R  V  L  
                    Query_10443  181  ATTCAAAAAATATGGTGTATCTGCAAATGAACAGCCTGCAAACCGAGGACACAGCCGTATATTACTGTACCAAAGACGACAGAGTGTTAT  270
V  93.4% (239/256)  IGHV3-15*01  227  ..........C.C.C.......................A...................G.............C...--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (6/6)     IGHD2-8*01   21   -----------------------------------------------------------------------------------------.  21

                                      T------------>                                  
                                      Y  A  F  D  K  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_10443  271  ATGCTTTTGACAAGTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  318
D  100.0% (6/6)     IGHD2-8*01   22   .....-------------------------------------------  26
J  93.0% (40/43)    IGHJ4*02     6    -----......T.C......................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_103426

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           343     2e-96
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	N/A	TCCTTGCCCCCGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCCTTGCCCCCGAACTAC	ASLPPNY	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  T  T  H  T  M  K  W  V  R  Q  A  P  G  K  G  L  
                    Query_10444  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCACTACCCATACCATGAAGTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  94.7% (232/245)  IGHV3-21*01  47   ....................................C.....G..G.T...G......C.................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  T  S  S  S  T  Y  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10444  91   AGTGGGTCGCATCCATTACTAGTAGTAGTACCTACACATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.7% (232/245)  IGHV3-21*01  137  ........T.........G...........GT....T.....................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  L  P  P  N  Y  W  G  
                    Query_10444  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGTCCTTGCCCCCGAACTACTGGGGCC  270
V  94.7% (232/245)  IGHV3-21*01  227  ....................................................G............-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  100.0% (39/39)   IGHJ4*02     10   ------------------------------------------------------------------------------............  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_10444  271  AGGGAACCCTGGTCACCGTCTCCTCAG  297
J  100.0% (39/39)   IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_39963

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           366     2e-103
IGHD1-7*01                                                                                            14.1    8.5   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGGG	TGGAACT	TACTACCCCCTAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGGGTGGAACTTACTACCCCCTATACTACCTTGACTAC	ARDRGGTYYPLYYLDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10445  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTCGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-48*03  47   ............................................A.............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  S  S  G  S  I  I  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_10445  91   AGTGGCTTTCATACATTAGTAGTAGTGGTAGTATCATATATTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (242/250)  IGHV3-48*03  137  .....G...........................C......C................A................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  N  L  Q  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  R  G  G  T  Y  Y  
                    Query_10445  181  AGAACTCACTGAATCTGCAAATGGACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGAGATCGGGGTGGAACTTACTACC  270
V  96.8% (242/250)  IGHV3-48*03  227  ...........T...........A............C.................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-7*01   9    ----------------------------------------------------------------------------.......-------  15

                                      T------------------>                                  
                                      P  L  Y  Y  L  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10445  271  CCCTATACTACCTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  324
J  95.8% (46/48)    IGHJ4*02     1    ------.....T....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_39962

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           269     2e-74
IGHD3-10*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGGACATGTTAG	GGTTCGGGGA	CTTGGTTCCCCTTGCCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACATGTTAGGGTTCGGGGACTTGGTTCCCCTTGCCCAC	ARDMLGFGDLVPLAH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	209	37	0	85


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  F  S  C  A  V  S  G  F  T  F  S  S  Y  A  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10446  1    GGTCCCTGAGATTCTCCTGTGCGGTCTCTGGATTCACCTTTTCCAGTTATGCCATCTCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  85.0% (209/246)  IGHV3-23*01  47   ...........C..........A.C................AG...C........GAG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  G  D  S  A  A  K  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_10446  91   AGTGGGTCTCTGGCATCGGTGACAGTGCTGCCAAGACATATTACGCAGACTCCGTGAGGGGCCGCTTCACCATCTCCAGAGACAATTCCA  180
V  85.0% (209/246)  IGHV3-23*01  137  ..........A.CT..TA...GT....G..GT.GC.....C................A......G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  M  T  V  Y  L  Q  M  N  S  L  R  P  E  D  T  G  M  Y  F  C  A  R  D  M  L  G  F  G  D  
                    Query_10446  181  GAATGACAGTATATCTGCAAATGAACAGTCTGAGACCCGAGGACACGGGCATGTATTTCTGTGCGAGGGACATGTTAGGGTTCGGGGACT  270
V  85.0% (209/246)  IGHV3-23*01  227  AG.AC..GC.G.................C......G............C.G.A....A........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD3-10*01  11   ------------------------------------------------------------------------------..........--  20

                                      ---------------->                                  
                                      L  V  P  L  A  H  W  G  Q  G  V  L  V  S  V  S  S  
                    Query_10446  271  TGGTTCCCCTTGCCCACTGGGGCCAGGGAGTCCTGGTCAGCGTCTCCTCAG  321
J  91.7% (33/36)    IGHJ4*02     13   ---------------..............AC........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_103429

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           346     2e-97
IGHD3-3*01                                                                                            14.1    8.2  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	112	2	0	98.2
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_10447  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGCC  93
V  94.7% (234/247)  IGHV4-31*02  50   .....TCC...A.....................C......C.............................C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_10447  94   TGGAATGGATTGGGAATATCTATCACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  94.7% (234/247)  IGHV4-31*02  140  ....G.........T.C......T..................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  G  T  A  E  Y  Y  C  A  R  G  V  G  N  N  W  F  
                    Query_10447  184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGGCACGGCCGAGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCG  273
V  94.7% (234/247)  IGHV4-31*02  230  ..........................................A........T...............-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  100.0% (51/51)   IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10447  274  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (51/51)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_39968

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           310     1e-86
IGHD5-12*01                                                                                           12.2    32   
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGATGCGTAGAGA	TGGCTTCGA	AAACCAATATGGGAGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATGCGTAGAGATGGCTTCGAAAACCAATATGGGAGATTTGACTAC	ARMRRDGFENQYGRFDY	237	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	236	114	97	11	6	85.1
CDR3-IMGT (germline)	237	240	4	4	0	0	100
Total	N/A	N/A	246	224	16	6	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10448  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  91.1% (224/246)  IGHV3-23*01  47   .........................................................................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  G  I  S  G  T  G  G  T  I  F  Y  A  G  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10448  91   AGTGGGTCTCAGGTATTAGTGGTACTGGTGGTACCATATTTTATGCGGGCTCCGTGAAGGGACGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.1% (224/246)  IGHV3-23*01  137  ............C...........G........G..C..AC..C..A.A............C............................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      N        L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  M  R  R  D  G  F  E  
                    Query_10448  181  A------CTTGTATCTGCAAATGAATAGCCTGAGAGCCGACGACACGGCCGTCTATTACTGTGCGAGGATGCGTAGAGATGGCTTCGAAA  264
V  91.1% (224/246)  IGHV3-23*01  227  .GAACACGC................C..............G...........A.............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  88.9% (8/9)      IGHD5-12*01  11   -------------------------------------------------------------------------------.....A...--  19

                                      GT-------------------->                                  
                                      N  Q  Y  G  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10448  265  ACCAATATGGGAGATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_41722

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           308     4e-86
IGHD2-21*02                                                                                           10.3    118  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	220	23	0	90.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E  
                    Query_10449  4    CCCTGAGACTCTCCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAAT  93
V  90.5% (220/243)  IGHV4-59*08  50   .....TCC...A.....A............G......C.G..G................A....G.......................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N  
                    Query_10449  94   GGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAACC  183
V  90.5% (220/243)  IGHV4-59*08  140  ......G.........T.....T.....CA.....T...................T........CA........................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M  
                    Query_10449  184  AGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATGG  273
V  90.5% (220/243)  IGHV4-59*08  230  ..............C...............................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (5/5)     IGHD2-21*02  17   ------------------------------------------------------------------------.....-------------  21
J  92.0% (46/50)    IGHJ6*02     13   ------------------------------------------------------------------------------.......T....  24

                                      ---->                                 
                                      A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_10449  274  CCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  311
J  92.0% (46/50)    IGHJ6*02     25   A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_131633

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD6-13*01                                                                                           14.1    9.8   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGCG	GCAACACCTGGTA	TCGAGATTCTCAGGCCGGCAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGCGGCAACACCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGAC	RDTAATPGIEILRPASTSTT	283	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	69	70	68	1	1	97.1
CDR1-IMGT	70	93	24	21	3	0	87.5
FR2-IMGT	94	144	51	51	0	0	100
CDR2-IMGT	145	168	24	24	0	0	100
FR3-IMGT	169	282	114	103	11	0	90.4
CDR3-IMGT (germline)	283	290	8	8	0	0	100
Total	N/A	N/A	291	275	15	1	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L   G  S  L  E  Q  R  *  K  S  P  G  S  P  *  R  S  P  V  R  V  L  D  T  A  L  A  A  
                    Query_10450  1    GCAGCTGG-GCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCCCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCGGCTA  89
V  94.5% (275/291)  IGHV5-51*01  6    ........T....................................T....................................AC.A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                      T  G  S  A  G  C  A  R  C  P  G  K  A  W  S  G  W  G  S  S  I  L  V  T  L  I  P  D  T  T  
                    Query_10450  90   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAACCC  179
V  94.5% (275/291)  IGHV5-51*01  96   ......................................................................................G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                      R  P  F  K  D  R  S  P  S  Q  S  T  G  P  S  E  P  P  T  C  S  G  P  A  *  R  P  R  T  P  
                    Query_10450  180  GTCCTTTCAAGGACAGGTCACCATCTCAGTCGACAGGTCCCTCGGAACCGCCTACCTGCAGTGGCCCAGCCTGAAGGCCTCGGACACCGC  269
V  94.5% (275/291)  IGHV5-51*01  186  ......C.....C................C.....A....A..A.C..................AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                      P  C  T  T  V  R  D  T  A  A  T  P  G  I  E  I  L  R  P  A  S  T  S  T  T  G  A  R  E  P  
                    Query_10450  270  CATGTACTACTGTGCGAGACACAGCGGCAACACCTGGTATCGAGATTCTCAGGCCGGCATCTACTTCGACGACTGGGGCCAGGGAACCCT  359
V  94.5% (275/291)  IGHV5-51*01  276  ......T..............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  84.6% (11/13)    IGHD6-13*01  8    --------------------------...G..G......---------------------------------------------------  20
J  95.7% (45/47)    IGHJ4*02     2    ------------------------------------------------------------......T...T...................  31

                                                       
                                      W  S  P  S  P  Q 
                    Query_10450  360  GGTCACCGTCTCCTCAG  376
J  95.7% (45/47)    IGHJ4*02     32   .................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_47561

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            369     2e-104
IGHD3-22*01                                                                                           27.6    8e-04 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTTTG	ACTATGATAGTCGTGGCTTTTAC	AGACGTTCTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTTTGACTATGATAGTCGTGGCTTTTACAGACGTTCTAACTACTTTGACTTC	ARGFDYDSRGFYRRSNYFDF	264	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	77	27	23	4	0	85.2
FR2-IMGT	78	128	51	51	0	0	100
CDR2-IMGT	129	149	21	21	0	0	100
FR3-IMGT	150	263	114	105	9	0	92.1
CDR3-IMGT (germline)	264	268	5	5	0	0	100
Total	N/A	N/A	268	252	16	0	94


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  I  T  C  T  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  
                    Query_10451  1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCATCACCTGCACTGTCTCTGGTGGCTCCATCACTACTAGTAATTGGTGGAGTTGGGTCC  90
V  94.0% (252/268)  IGHV4-4*02   26   ................T...............C........G.....................GC.G......C................  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  Q  Y  N  P  S  L  K  S  R  V  
                    Query_10451  91   GCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCCAGTACAACCCGTCACTCAAGAGTCGAGTCA  180
V  94.0% (252/268)  IGHV4-4*02   116  ...........................................................A.C...........C................  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  I  S  V  D  K  S  K  N  Q  I  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  
                    Query_10451  181  CGATATCAGTAGACAAGTCCAAGAACCAGATCTCCCTGAGGTTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGG  270
V  94.0% (252/268)  IGHV4-4*02   206  .C...........................T.........A.C....C...............................A.........--  293
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A     

                                      -------------------CDR3-IMGT------------------------>                                  
                                      G  F  D  Y  D  S  R  G  F  Y  R  R  S  N  Y  F  D  F  W  G  R  G  T  L  V  A  V  S  S  
                    Query_10451  271  GCTTTGACTATGATAGTCGTGGCTTTTACAGACGTTCTAACTACTTTGACTTCTGGGGCCGGGGAACCCTGGTCGCTGTCTCCTCAG  357
D  87.0% (20/23)    IGHD3-22*01  6    ------...........A....T.A....----------------------------------------------------------  28
J  91.7% (44/48)    IGHJ4*02     1    ---------------------------------------............A........A.............A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_108369

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     1e-87
IGHD4-17*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TGTCTCCA	GACTACGGTGAC	GCT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTGTCTCCAGACTACGGTGACGCTTTTCACGAC	AKVSPDYGDAFHD	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	125	24	18	6	0	75
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	232	216	16	0	93.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  H  L 
                    Query_10452  15   TGTGCAGCCTCTGGATTTACCTTTAGCAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGGAGTGGGTCTCACATTTG  104
V  93.1% (216/232)  IGHV3-23*01  64   .................C...........C......................................G...............GC.A.T  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  R  G  G  S  S  Y  Y  A  D  S  V  K  G  R  C  T  I  S  R  D  N  S  K  K  T  L  Y  L 
                    Query_10452  105  AGTGGTCGTGGTGGCAGTTCATACTACGCAGATTCCGTGAAGGGCCGGTGCACCATCTCCAGAGACAATTCCAAGAAGACGCTGTATCTG  194
V  93.1% (216/232)  IGHV3-23*01  154  ......A.......T..CA.............C................T...........................C............  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------CDR3-IMGT-------------->      
                                       Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  V  S  P  D  Y  G  D  A  F  H  D  W  G 
                    Query_10452  195  CAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTTTATTACTGTGCGAAAGTGTCTCCAGACTACGGTGACGCTTTTCACGACTGGGGC  284
V  93.1% (216/232)  IGHV3-23*01  244  .................................G.A................--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (12/12)   IGHD4-17*01  2    ------------------------------------------------------------............------------------  13
J  95.3% (41/43)    IGHJ4*02     6    ---------------------------------------------------------------------------...G..T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_10452  285  CAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  95.3% (41/43)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_108368

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           322     2e-90
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAG	TGGAACGAC	GGG	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGAGTGGAACGACGGGGACGAC	ARHEWNDGDD	246	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  D  S  I  S  N  N  L  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_10453  4    CCCTGAGACTCTCCTGCAGTGTCTCTGGAGACTCCATCAGCAATAATCTTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  91.2% (228/250)  IGHV4-39*01  50   .....TCC...A......C.........T.G...........G..G.AG.......................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  A  I  Y  Y  T  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_10453  94   TGGAGTGGATTGGAGCTATCTATTATACTGGAAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCA  183
V  91.2% (228/250)  IGHV4-39*01  140  .............GAG...........G...G.G........................................................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  K  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  E  W  N  D  G  D  
                    Query_10453  184  AGAACAAGTTCTCCCTGAAGCTGACCTCTGTCACCGCCGCAGACACGGCTGTGTACTACTGTGCGAGACATGAGTGGAACGACGGGGACG  273
V  91.2% (228/250)  IGHV4-39*01  230  .....C..................G......G.......................T..............--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD1-1*01   9    --------------------------------------------------------------------------.........-------  17
J  97.5% (39/40)    IGHJ4*02     9    --------------------------------------------------------------------------------------...T  12

                                      ->                                  
                                      D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10453  274  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.5% (39/40)    IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_333958

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           364     5e-103
IGHD6-6*01                                                                                            19.9    0.16  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTAG	GAACCTGGTCTTC	GAGTATAGAGGCTCGT	GGGACCAGATAAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGGAACCTGGTCTTCGAGTATAGAGGCTCGTGGGACCAGATAAAATACGGAATGGACGTC	TRNLVFEYRGSWDQIKYGMDV	249	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	110	4	0	96.5
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	243	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  D  D  Y  T  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10454  1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGATGATTATACTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (243/253)  IGHV3-49*04  47   ..........................................G.......G.......................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  L  I  E  S  K  A  Y  G  G  T  T  K  Y  A  A  S  V  K  A  R  F  T  I  S  R  D  
                    Query_10454  91   AGTGGGTAGGTCTCATTGAAAGCAAAGCTTATGGTGGGACCACAAAATACGCCGCGTCTGTGAAAGCCAGATTCACCATCTCAAGAGATG  180
V  96.0% (243/253)  IGHV3-49*04  137  ...........T.....AG.....................A...G.....................G.......................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  R  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  N  L  V  F  E  
                    Query_10454  181  ATTCCAGAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTACTACTGTACTAGGAACCTGGTCTTCGAGT  270
V  96.0% (243/253)  IGHV3-49*04  227  ......A......................................................T...........-----------------  299
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  87.5% (14/16)    IGHD6-6*01   1    --------------------------------------------------------------------------------------....  4

                                      -----CDR3-IMGT-------------------------->                                 
                                      Y  R  G  S  W  D  Q  I  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10454  271  ATAGAGGCTCGTGGGACCAGATAAAATACGGAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
D  87.5% (14/16)    IGHD6-6*01   5    ....CA......--------------------------------------------------------------  16
J  97.9% (47/48)    IGHJ6*02     15   --------------------------.....T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_154262

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           349     2e-98
IGHD2-21*02                                                                                           18.0    0.61 
IGHJ1*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTCACAGTATTGTGGCGC	TGGCGACTGCTA	CGCCTCC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCACAGTATTGTGGCGCTGGCGACTGCTACGCCTCCGCTGAGTACTTCCAGCAC	ARHSQYCGAGDCYASAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10455  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*08  49   .............................................T..........C.................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_10455  91   TGGATTGGGTATATCTATTCCAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGTTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*08  139  ...................A...............C...................................AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       H  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  S  Q  Y  C  G  A  G  D 
                    Query_10455  181  CACTTCTCCCTGACCCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATTCACAGTATTGTGGCGCTGGCGAC  270
V  95.5% (234/245)  IGHV4-59*08  229  ..G..........AG....G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD2-21*02  13   -----------------------------------------------------------------------------------...T...  19

                                      MGT-------------------------->                                  
                                       C  Y  A  S  A  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10455  271  TGCTACGCCTCCGCTGAGTACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  334
D  91.7% (11/12)    IGHD2-21*02  20   .....-----------------------------------------------------------  24
J  96.2% (50/52)    IGHJ1*01     1    ------------.....A.........................................C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_112797

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           318     6e-89
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ3*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GTCTTCAGAGGCACTT	CTATGACACTGGTGGTTAT	GGGGTC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGTCTTCAGAGGCACTTCTATGACACTGGTGGTTATGGGGTCGATGCTTTTGATGCC	AKGLQRHFYDTGGYGVDAFDA	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10456  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.8% (226/249)  IGHV3-23*01  47   ..........................................G..............G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  L  D  G  S  G  H  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10456  91   AGTGGGTCTCAGCACTTGATGGCAGTGGTCATAAGACATACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAATTCCA  180
V  90.8% (226/249)  IGHV3-23*01  137  .............TA..AG...T......GG..GC.............................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  V  Y  L  Q  L  D  S  L  G  V  E  D  T  A  L  Y  Y  C  A  K  G  L  Q  R  H  F  Y  
                    Query_10456  181  AGAACACAGTGTACCTGCAATTAGATAGCCTGGGAGTCGAGGACACGGCCTTATATTACTGTGCGAAAGGTCTTCAGAGGCACTTCTATG  270
V  90.8% (226/249)  IGHV3-23*01  227  .......GC....T......A.GA.C......A...C.............G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  84.2% (16/19)    IGHD3-22*01  7    -------------------------------------------------------------------------------------.....  11

                                      DR3-IMGT-------------------------->                                  
                                      D  T  G  G  Y  G  V  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10456  271  ACACTGGTGGTTATGGGGTCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTGACAGTCTCTTCAG  339
D  84.2% (16/19)    IGHD3-22*01  12   .T.G.A........-------------------------------------------------------  25
J  93.9% (46/49)    IGHJ3*01     2    --------------------.............T.....................C..C..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_154264

Length=439
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           366     2e-103
IGHD3-16*01                                                                                           18.0    0.75  
IGHJ6*02                                                                                              73.7    3e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCCACCCTCAGGCCCGAGGAGG	ATGATCGCGTTTGGG	CCCCCTGGGACGCCCATACCCCCCCTCCGATTACCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCACCCTCAGGCCCGAGGAGGATGATCGCGTTTGGGCCCCCTGGGACGCCCATACCCCCCCTCCGATTACCCACTACTCGGCTATGGAGGTC	STLRPEEDDRVWAPWDAHTPPPITHYSAMEV	291	383	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	69	6	0	92
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	103	11	0	90.4
Total	N/A	N/A	288	261	27	0	90.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  G  G  V  K  R  P  G  A  S  V  R  V  S  C  K  A  S  A  Y  T  F  T 
                    Query_10457  3    CAGGTCCAGCTTGTGCAGTCTGGAGGTGGGGTGAAGAGGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGCTTACACTTTTACC  92
V  90.6% (261/288)  IGHV1-18*04  1    .....T.....G.............C..A........A.................A....................G......C......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  V  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  V  K  N  G  N  T  N  Y 
                    Query_10457  93   ACCTACGTGATCAGCTGGGTGCGACAGGCCCCAGGACAAGGACTTGAGTGGATGGGATGGATCAGCGTTAAGAATGGTAACACAAACTAT  182
V  90.6% (261/288)  IGHV1-18*04  91   .G.....GT.......................T........G.........................C.T.C..................  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  P  E  F  Q  G  R  L  T  M  T  T  D  A  F  T  T  T  A  Y  L  D  L  T  S  L  R  S  D  D 
                    Query_10457  183  GCACCGGAGTTCCAGGGCAGACTCACCATGACCACAGACGCATTCACGACCACAGCCTATCTGGACCTGACGAGCCTGAGATCTGACGAC  272
V  90.6% (261/288)  IGHV1-18*04  181  ....A.A..C...........G.................A...C.....G.........CA....G....G...................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------------------------------------CDR3-IMGT---------------------
                                       T  A  V  Y  Y  C  S  T  L  R  P  E  E  D  D  R  V  W  A  P  W  D  A  H  T  P  P  P  I  T 
                    Query_10457  273  ACGGCCGTGTATTACTGTTCCACCCTCAGGCCCGAGGAGGATGATCGCGTTTGGGCCCCCTGGGACGCCCATACCCCCCCTCCGATTACC  362
V  90.6% (261/288)  IGHV1-18*04  271  ..................------------------------------------------------------------------------  288
                                       T  A  V  Y  Y  C                                                                         
D  86.7% (13/15)    IGHD3-16*01  6    ----------------------------------------.....TA........-----------------------------------  20

                                      -------------------->                                 
                                       H  Y  S  A  M  E  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_10457  363  CACTACTCGGCTATGGAGGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  416
J  90.6% (48/53)    IGHJ6*02     10   -......AC.G......C.........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 43233912


Query= Query_154267

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           291     5e-81
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CACA	TAGTAC	TTGCCGAATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATAGTACTTGCCGAATCATTGACTAT	ARAHSTCRIIDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G 
                    Query_10458  1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  87.2% (218/250)  IGHV4-31*01  49   ...................C................A...G.A....TGG..A...C....G.............CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  Y  I  Y  H  V  E  S  T  S  R  N  P  S  L  K  S  Q  L  T  I  S  L  D  P  S 
                    Query_10458  91   CTGGAGTGGATGGGATACATCTATCACGTTGAGAGCACCTCCCGCAACCCGTCCCTCAAGAGTCAACTTACCATTTCACTCGACCCGTCT  180
V  87.2% (218/250)  IGHV4-31*01  139  ...........T..G.........T..AG..G........A.TA....................T.G.......A...G.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  S  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  S  T  C  R  I 
                    Query_10458  181  AAGAGCCAGTTCTCCCTAAAACTGACCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCACATAGTACTTGCCGAATC  270
V  87.2% (218/250)  IGHV4-31*01  229  ....A............G..G....G....G.......................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-2*01   13   --------------------------------------------------------------------------......----------  18

                                      -------->                                  
                                       I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10458  271  ATTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.6% (41/42)    IGHJ4*02     7    -.......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_112794

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         330     1e-92
IGHD3-9*01                                                                                            18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	AGCAGAGGAA	TGACTGGTT	TGGGATCG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAAGCAGAGGAATGACTGGTTTGGGATCGTGGTTCGACCCC	ARSRGMTGLGSWFDP	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  E  G  Y  W  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10459    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGAGGGTTACTGGTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  92.4% (230/249)  IGHV4-30-4*01  49   ..................A...........................GT.A.....AC.................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  N  S  G  S  T  Y  Y  N  P  S  L  E  R  R  A  S  L  S  V  D  T  S 
                    Query_10459    91   CTGGAGTGGATTGGGTACATCTATAACAGTGGGAGCACCTACTACAACCCGTCCCTCGAGAGGCGAGCTTCCCTATCAGTCGACACGTCC  180
V  92.4% (230/249)  IGHV4-30-4*01  139  ........................T................................A....T....T.A..A.......A.........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         N  N  H  F  S  L  S  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  R  G  M  T  G  L 
                    Query_10459    181  AATAATCACTTCTCCCTGAGCCTGAGTTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAAGCAGAGGAATGACTGGTTTG  270
V  92.4% (230/249)  IGHV4-30-4*01  229  ..G..C..G..........AG.....C..........................................---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-9*01     15   -------------------------------------------------------------------------------.........--  23

                                        ----------------->                                  
                                         G  S  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10459    271  GGATCGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  100.0% (46/46)   IGHJ5*02       6    ------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_238891

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           425     3e-121
IGHD2-8*02                                                                                            14.1    9.7   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GTGAGGATTTCTTTGATG	CTGGTGG	GTCCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGAGGATTTCTTTGATGCTGGTGGGTCCCACTACTACGGCTTGGACGTC	ARREDFFDAGGSHYYGLDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	281	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  N  F  A  A  F
                    Query_10460  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAACTTTGCCGCCTT  90
V  96.9% (281/290)  IGHV5-51*01  6    .............................................................................G....A..AG..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_10460  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCCGGTGACTCTGATACCAGATACAGCCC  180
V  96.9% (281/290)  IGHV5-51*01  96   ...............................................................T..........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  A  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  R  A  S  D  T  A
                    Query_10460  181  GTCCTTCCAAGGCCAGGTCGCCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACACCGC  270
V  96.9% (281/290)  IGHV5-51*01  186  ...................A....C.................................................A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  R  E  D  F  F  D  A  G  G  S  H  Y  Y  G  L  D  V  W  G  Q  G  T  T  V
                    Query_10460  271  CATGTATTACTGTGCGAGACGTGAGGATTTCTTTGATGCTGGTGGGTCCCACTACTACGGCTTGGACGTCTGGGGCCAAGGGACCACGGT  360
V  96.9% (281/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-8*02   12   --------------------------------------.......---------------------------------------------  18
J  94.3% (50/53)    IGHJ6*02     10   --------------------------------------------------..........TA............................  49

                                                   
                                        T  V  S  S 
                    Query_10460  361  CACCGTCTCTTCA  373
J  94.3% (50/53)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_238890

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            378     3e-107
IGHD1-26*01                                                                                           14.1    9.0   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCG	GTGGGAG	TCACCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATGCGGTGGGAGTCACCCCCTACTTTGACTAC	ARDAVGVTPYFDY	273	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	49	2	0	96.1
CDR2-IMGT	132	158	27	26	1	0	96.3
FR3-IMGT	159	272	114	103	11	0	90.4
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	280	261	19	0	93.2


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  L  V  S  R  N  G  A  A  W  N  W  
                    Query_10461  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACATGTGCCATCTCCGGGGACCTTGTCTCTAGGAACGGTGCTGCTTGGAATTGGA  90
V  93.2% (261/280)  IGHV6-1*01   26   .....................................C..................AG.........C...A.............C....  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  P  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  L  R  
                    Query_10461  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCCGGGAAGGACATATTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTCTGAGAG  180
V  93.2% (261/280)  IGHV6-1*01   116  .................................T............C....................................G...A.A  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      G  R  I  I  I  S  P  D  T  S  N  N  L  F  S  L  H  L  N  S  V  T  P  E  D  T  A  M  Y  Y  
                    Query_10461  181  GTCGAATAATCATCAGCCCAGACACTTCCAACAACCTCTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTATGTATTACT  270
V  93.2% (261/280)  IGHV6-1*01   206  .........C.....A.........A.....G....AG...........G..............................G.........  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><--------------CDR3-IMGT-------------->                                  
                                      C  A  R  D  A  V  G  V  T  P  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10461  271  GTGCAAGAGATGCGGTGGGAGTCACCCCCTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  345
V  93.2% (261/280)  IGHV6-1*01   296  ..........-----------------------------------------------------------------  305
                                      C  A  R                                                                    
D  100.0% (7/7)     IGHD1-26*01  7    --------------.......------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ----------------------------.........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_108363

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGTCGTATTCTTT	TGATAGTAGTGGT	CAGAGTCCCGCG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGTCGTATTCTTTTGATAGTAGTGGTCAGAGTCCCGCGTACTTTGACTAC	ARDLSYSFDSSGQSPAYFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10462  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  C  I  S  G  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10462  91   AGTGGGTCTCATGCATCAGTGGTGGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  ............C...T...A..A..................................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  S  Y  S  F  D  
                    Query_10462  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGTCGTATTCTTTTGATA  270
V  98.4% (246/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD3-22*01  10   -------------------------------------------------------------------------------------.....  14

                                      R3-IMGT------------------------>                                  
                                      S  S  G  Q  S  P  A  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10462  271  GTAGTGGTCAGAGTCCCGCGTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  336
D  100.0% (13/13)   IGHD3-22*01  15   ........----------------------------------------------------------  22
J  97.8% (45/46)    IGHJ4*02     3    --------------------........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_112798

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     3e-90
IGHD6-19*01                                                                                           18.0    0.66 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	242	26	6	88.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_10463  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.3% (242/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_10463  91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.3% (242/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_10463  181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.3% (242/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_10463  271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.3% (242/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_333956

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*03                                                                                           291     5e-81
IGHD3-22*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TC	ATGACAGTAGTGGCTAT	CCCAC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATGACAGTAGTGGCTATCCCACCTTTGACCGC	AKDHDSSGYPTFDR	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  K  S  A  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_10464  1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCACGTTTAGGAAGTCTGCCATGGGCTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  87.2% (218/250)  IGHV3-23*03  47   ......................A..............C.....C.GC.A.......A...................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  E  S  P  G  Y  D  I  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10464  91   AATGGGTCGCACTTATTGAGAGCCCTGGTTATGACATATTCTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  87.2% (218/250)  IGHV3-23*03  137  .G......T..G.....T.T...GG....AG.AG..C..A...T......................................T.......  226
                                      E  W  V  S  V  I  Y  S  G  G  S  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  N  T  L  Y  L  Q  L  T  S  L  R  A  A  D  T  G  I  Y  Y  C  A  K  D  H  D  S  S  G  Y  
                    Query_10464  181  GGAACACCCTCTATCTGCAGTTGACCAGCCTGAGAGCCGCGGACACGGGCATATATTACTGTGCGAAAGATCATGACAGTAGTGGCTATC  270
V  87.2% (218/250)  IGHV3-23*03  227  A......G..G........AA...A..............A........C.G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.2% (15/17)    IGHD3-22*01  9    ------------------------------------------------------------------------....T........T...-  25

                                      ------------->                                  
                                      P  T  F  D  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10464  271  CCACCTTTGACCGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  95.5% (42/44)    IGHJ4*02     5    ----.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_238894

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           333     1e-93
IGHD3-16*01                                                                                           12.2    32   
IGHJ2*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGCCG	TGGGGG	CATCAAGGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGCCGTGGGGGCATCAAGGGATCCTGGTACTCCGATCTC	ARVRRGGIKGSWYSDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10465  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGACATGAGATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-48*03  47   ..............................................TT....A.....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  T  G  S  T  L  I  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10465  91   AGTGGGTTTCACACATTAGTACTGGTAGTACTCTTATACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  92.8% (231/249)  IGHV3-48*03  137  ...........T.........G.A..G...G.ACC...T..................................................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  V  R  R  G  G  I  K  
                    Query_10465  181  AGAATTCTCTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGAGAGTCCGCCGTGGGGGCATCAAGG  270
V  92.8% (231/249)  IGHV3-48*03  227  ....C..A........G.................................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------------......--------  22

                                      T------------------>                                  
                                      G  S  W  Y  S  D  L  W  S  R  G  T  L  V  T  V  S  P  
                    Query_10465  271  GATCCTGGTACTCCGATCTCTGGAGTCGTGGCACCCTGGTCACTGTCTCCCCAG  324
J  92.0% (46/50)    IGHJ2*01     4    ----........T..........G.C........................T...  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_238897

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           385     4e-109
IGHD4-4*01                                                                                            14.1    9.4   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACGC	TGACGACAGT	GTTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACGCTGACGACAGTGTTAACTTTGATTAC	ARYADDSVNFDY	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	71	4	0	94.7
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	46	5	0	90.2
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	104	10	0	91.2
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	294	270	24	0	91.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  N  F  M 
                    Query_10466  3    CAGATGCAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACTTCTGGTTACAACTTTATG  92
V  91.8% (270/294)  IGHV1-18*01  1    ...G.T...................C...........................................G............C.....CC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  G  G  L  E  W  M  G  W  S  S  A  Y  N  G  N  T  N  Y 
                    Query_10466  93   AGCTATGGCATCAGTTGGGTGCGACAGGCCCCTGGAGGAGGACTTGAGTGGATGGGCTGGAGCAGCGCTTACAATGGTAACACAAACTAT  182
V  91.8% (270/294)  IGHV1-18*01  91   ........T.....C.....................CA...G..............A....T............................  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  D  F  Q  G  R  V  T  M  T  T  D  R  S  T  S  T  A  Y  L  V  L  R  S  L  S  S  D  D 
                    Query_10466  183  GCGCAGGACTTCCAGGGCAGAGTCACCATGACCACAGACAGATCCACGAGCACAGCCTACTTGGTGTTGAGGAGCCTGAGCTCTGACGAC  272
V  91.8% (270/294)  IGHV1-18*01  181  ..A...A.GC..............................C...................A...A.C.............A.........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  V  Y  Y  C  A  R  Y  A  D  D  S  V  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10466  273  ACGGCCGTGTATTATTGTGCGAGATACGCTGACGACAGTGTTAACTTTGATTACTGGGGACAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  91.8% (270/294)  IGHV1-18*01  271  ..............C.........----------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                 
D  90.0% (9/10)     IGHD4-4*01   1    -----------------------------....T.....-------------------------------------------------  10
J  95.6% (43/45)    IGHJ4*02     4    -------------------------------------------.......C........C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_238896

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           399     2e-113
IGHD2-8*02                                                                                            12.2    34    
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	A	GTACTG	ACCCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTACTGACCCCGACTAT	ARSTDPDY	284	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  D  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_10467  1    GCAGCTGGTGCAGTCTGGGGCAGAGGTGAGAAAGCCGGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  94.1% (272/289)  IGHV5-51*03  6    ..................A..........A............G..................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  A  T  T  R  Y  S  P
                    Query_10467  91   CTGGATCGGCTGGGTGCGCCAGAGGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACGCTACTACCAGATACAGCCC  180
V  94.1% (272/289)  IGHV5-51*03  96   .......................T...............................A..............T..GA...............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  R  A  S  D  S  A
                    Query_10467  181  GTCGTTCGAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTTGCAGTGGAGCAGCCTGAGGGCCTCGGACAGCGC  270
V  94.1% (272/289)  IGHV5-51*03  186  ...C...C..............A................................C..................A...........C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------CDR3-IMGT------>                                  
                                        M  Y  Y  C  A  R  S  T  D  P  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_10467  271  CATGTATTATTGTGCGAGAAGTACTGACCCCGACTATTGGGGCCAGGGCACCCTGGTCATCGTCTCCTCAG  341
V  94.1% (272/289)  IGHV5-51*03  276  .........C.........----------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                     
D  100.0% (6/6)     IGHD2-8*02   9    --------------------......---------------------------------------------  14
J  92.5% (37/40)    IGHJ4*02     9    -------------------------------.....C...........A..........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_188804

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_10468  1    ACCCTGTCCCTCACCTGCACTGTCTCAGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.0% (223/245)  IGHV4-59*01  49   ..........................T....G........G.AGT.A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S 
                    Query_10468  91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGC  180
V  91.0% (223/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T.A....A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_10468  181  CAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTT  270
V  91.0% (223/245)  IGHV4-59*01  229  ..............G.....C..................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10468  271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_188805

Length=297
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           305     3e-85
IGHD2-8*01                                                                                            12.2    27   
IGHJ1*01                                                                                              64.1    1e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD2-8*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	ATGG	GGTGTA	N/A	TTCCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGAATGGGGTGTATTCCAGTAT	TTEWGVFQY	214	240	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
CDR1-IMGT	15	18	4	4	0	0	100
FR2-IMGT	19	69	51	50	1	0	98
CDR2-IMGT	70	99	30	29	1	0	96.7
FR3-IMGT	100	213	114	110	4	0	96.5
CDR3-IMGT (germline)	214	221	8	8	0	0	100
Total	N/A	N/A	207	201	6	0	97.1


Alignments

                                      <CD><--------------------FR2-IMGT---------------------><----------CDR2-IMGT---------><----
                                        W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  T  D  G  G  T  P  D  Y
                    Query_10469  15   CTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGGAGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACACCAGACTA  104
V  97.1% (201/207)  IGHV3-15*01  96   ....................................G.............................................A.......  185
                                        W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y

                                      ------------------------------------------------FR3-IMGT----------------------------------
                                        A  A  P  V  K  G  R  F  T  F  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D
                    Query_10469  105  CGCTGCACCCGTGAAAGGCAGATTCACCTTCTCAAGGGATGATTCAAAAAACACACTGTATCTGCAAATGAACAGCCTGAAAACCGAGGA  194
V  97.1% (201/207)  IGHV3-15*01  186  ............................A.......A.................G...................................  275
                                        A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D

                                      ------------------><--------CDR3-IMGT-------->                                 
                                        T  A  V  Y  Y  C  T  T  E  W  G  V  F  Q  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_10469  195  CACAGCCGTGTATTATTGTACCACAGAATGGGGTGTATTCCAGTATTGGGGCCAGGGCACTCTGGTCACCGTCTCCTCA  273
V  97.1% (201/207)  IGHV3-15*01  276  ...............C...........----------------------------------------------------  302
                                        T  A  V  Y  Y  C  T  T                                                       
D  100.0% (6/6)     IGHD2-8*01   17   -------------------------------......------------------------------------------  22
J  92.9% (39/42)    IGHJ1*01     10   -------------------------------------......C.C..............C..................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 28509570


Query= Query_188806

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           346     2e-97
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCGTGCTGTTA	ACTATGATAGTGGTG	ATTCCGGTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CGTGCTGTTAACTATGATAGTGGTGATTCCGGTTGGTACTTTGACTAC	RAVNYDSGDSGWYFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	241	113	107	6	0	94.7
Total	N/A	N/A	241	231	10	0	95.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10470  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACTTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.9% (231/241)  IGHV3-33*01  47   .....................................C.......G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  E  K  Y  Y  A  G  S  L  R  G  R  F  T  I  S  R  D  N  S  
                    Query_10470  91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTGAAAAATACTATGCAGGCTCCTTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.9% (231/241)  IGHV3-33*01  137  ................................A.T.............A....G...A................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  R  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  R  A  V  N  Y  D  S  G  D  
                    Query_10470  181  AGCGCACACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGCCGTGCTGTTAACTATGATAGTGGTGATT  270
V  95.9% (231/241)  IGHV3-33*01  227  ..AA...G.....................................................-----------------------------  287
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                
D  93.3% (14/15)    IGHD3-22*01  6    ------------------------------------------------------------------------...........A...---  20

                                      T------------------>                                  
                                      S  G  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10470  271  CCGGTTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (46/46)   IGHJ4*02     3    --------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_115469

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD3-22*01                                                                                           44.9    5e-09
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGG	ATTACTTTGATAGTAGTGGTTATTAC	CGGTCGAACTATCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGATTACTTTGATAGTAGTGGTTATTACCGGTCGAACTATCCTTTTGAGTAC	ARGDYFDSSGYYRSNYPFEY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  A  F  S  S  Y  D  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10471  1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCGCCTTTAGCAGCTATGACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-23*01  47   ........................C..........A...............C.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  R  G  G  S  T  Y  H  A  D  S  V  R  G  R  F  S  I  S  R  D  N  S  
                    Query_10471  91   AGTGGGTCTCCGTTATCAGTGGTAGAGGTGGTAGCACATACCACGCAGACTCCGTGAGGGGCCGGTTCTCCATCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-23*01  137  ..........A.C...T........T...............T...............A..........A.....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  G  D  Y  F  D  S  S  
                    Query_10471  181  AGAACACGCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAGAGGGGATTACTTTGATAGTAGTG  270
V  94.4% (235/249)  IGHV3-23*01  227  ............A.....................................G...............A..---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  96.2% (25/26)    IGHD3-22*01  3    ------------------------------------------------------------------------......A...........  20

                                      R3-IMGT------------------------>                                  
                                      G  Y  Y  R  S  N  Y  P  F  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10471  271  GTTATTACCGGTCGAACTATCCTTTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  96.2% (25/26)    IGHD3-22*01  21   ........----------------------------------------------------------  28
J  97.7% (42/43)    IGHJ4*02     6    -----------------------.....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_192076

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           321     7e-90
IGHD3-3*01                                                                                            23.8    0.011
IGHJ5*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCTGTCCCGC	ATTATGGTTTTTGGAATGATTATT	CCAAAATCTAACTCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTGTCCCGCATTATGGTTTTTGGAATGATTATTCCAAAATCTAACTCTTTCGACACC	ARGLSRIMVFGMIIPKSNSFDT	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  Y  G  G  S  F  N  G  H  Y  W  C  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10472  1    ACCCTGTCCCTCACCTGCTCTGTCTATGGTGGGTCGTTCAATGGTCACTACTGGTGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  91.8% (225/245)  IGHV4-34*01  49   ..................G................C....G....T........A...................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  D  T  N  Y  N  S  S  L  K  S  R  V  T  L  S  V  D  T  S  R  N 
                    Query_10472  91   TGGATTGGGGAAATTTCTCATAGTGGAGACACCAACTACAACTCGTCCCTCAAGAGTCGAGTCACCTTGTCAGTTGACACGTCCAGGAAC  180
V  91.8% (225/245)  IGHV4-34*01  139  ..............CAA..........AG.............C.......................A.A.....A..........A....  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  T  S  L  T  V  A  D  T  A  V  Y  Y  C  A  R  G  L  S  R  I  M  V  F  G 
                    Query_10472  181  CAGTTCTCCCTGAAGCTGACCTCCCTGACCGTCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCCTGTCCCGCATTATGGTTTTTGGA  270
V  91.8% (225/245)  IGHV4-34*01  229  ...................G...TG......C...............G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  83.3% (20/24)    IGHD3-3*01   3    ---------------------------------------------------------------------------....C.A........  17

                                      -IMGT--------------------------->                                  
                                       M  I  I  P  K  S  N  S  F  D  T  W  G  P  G  T  L  V  T  V  S  S  
                    Query_10472  271  ATGATTATTCCAAAATCTAACTCTTTCGACACCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  337
D  83.3% (20/24)    IGHD3-3*01   18   G..G.....----------------------------------------------------------  26
J  95.3% (41/43)    IGHJ5*02     9    ------------------------......C.........A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_188808

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*05                                                                                           344     6e-97
IGHD5-12*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*05	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTGGAC	GTGGCTACGATT	TTCCTCCGGGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATCGTGGACGTGGCTACGATTTTCCTCCGGGTTACTTTCACTAT	ARDRGRGYDFPPGYFHY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  F  Y  M  S  W  M  R  Q  A  P  G  K  G  L  
                    Query_10473  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCCTTCAGTGACTTCTACATGAGCTGGATGCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-11*05  47   ...................................A............A...............C..C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  R  S  T  S  T  Y  T  N  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_10473  91   AGTGGGTTTCATTCATTAGGAGCACTAGTACTTACACAAACTACGCAGACTCTGTGCGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-11*05  137  ............A......T..T.G.....G.........................AA................................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  S  L  Q  M  N  S  L  R  A  E  D  T  G  V  Y  F  C  A  R  D  R  G  R  G  Y  D  
                    Query_10473  181  AGAACTCACTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGGCGTGTATTTCTGTGCCAGAGATCGTGGACGTGGCTACGATT  270
V  94.0% (235/250)  IGHV3-11*05  227  ............A...................................C........A......G.....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD5-12*01  10   ------------------------------------------------------------------------------............  21

                                      GT-------------------->                                  
                                      F  P  P  G  Y  F  H  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10473  271  TTCCTCCGGGTTACTTTCACTATTGGGGCCAGGGAATCCTTGTCACCGTCTCCTCAG  327
J  91.3% (42/46)    IGHJ4*02     3    -----------......G....C.............C...G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_188809

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           297     8e-83
IGHD2-21*01                                                                                           19.9    0.16 
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-21*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTGTTCCAAT	TGGTGGTTATTGGTAT	CTC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTGTTCCAATTGGTGGTTATTGGTATCTCTTCGATCCC	ARDRVPIGGYWYLFDP	255	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	123	36	16	8	12	44.4
FR3-IMGT	124	254	114	105	9	0	92.1
CDR3-IMGT (germline)	255	262	8	8	0	0	100
Total	N/A	N/A	262	228	22	12	87


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10474  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTACTTATAGTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  87.0% (228/262)  IGHV3-30*04  47   .....................................C.......GC...GC......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----CDR2-IMGT----><--------------------------------------------------------
                                      E  W  V  A  V  I  A  Y  D  G  N  T  Y  Y  A  D  S  Y  Y  A  D  S  V  K  G  R  F  T  I  S  
                    Query_10474  91   AGTGGGTGGCAGTTATTGCATATGATGGCAATACATACTACGCAGACTCCTACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCA  180
V  87.0% (228/262)  IGHV3-30*04  137  ................AT..........A.G..------------.TAAA..........................A.............  214
                                      E  W  V  A  V  I  S  Y  D  G  S              N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  

                                      ----FR3-IMGT-------------------------------------------------------------><---------------
                                      R  D  N  S  R  D  T  L  Y  L  Q  M  N  R  L  R  P  E  D  T  A  V  Y  Y  C  A  R  D  R  V  
                    Query_10474  181  GAGACAATTCCAGGGACACCCTCTATCTGCAAATGAACCGCCTGAGACCTGAGGACACCGCTGTCTATTACTGTGCGAGAGATCGTGTTC  270
V  87.0% (228/262)  IGHV3-30*04  215  ............A.A....G..G...............A........G..........G.....G.................--------  296
                                      R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R           

                                      ----CDR3-IMGT------------------>                                  
                                      P  I  G  G  Y  W  Y  L  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10474  271  CAATTGGTGGTTATTGGTATCTCTTCGATCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  87.5% (14/16)    IGHD2-21*01  10   ----.......G....C...----------------------------------------------  25
J  97.7% (42/43)    IGHJ5*02     9    -----------------------.....C.....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_191137

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           411     5e-117
IGHD2-21*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	ATTTTGGTGG	ATAGAGATAGAGTTCC	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTC	ARGGFWWIEIEFRMDV	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	106	8	0	93
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	279	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_10475  3    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACC  92
V  94.6% (279/295)  IGHV1-18*01  1    .....T.....G.......................................................................C......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       G  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  W  I  S  A  Y  T  G  N  T  K  N 
                    Query_10475  93   GGCTATGGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGATGGATCAGCGCTTACACTGGTAATACAAAAAAT  182
V  94.6% (279/295)  IGHV1-18*01  91   A............G.....................................A.....................A......C.....CT..  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  V  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_10475  183  GCACAAAAAGTCCAGGGCAGAGTGACCATGACCACAGACACATCCACGAGAACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGAC  272
V  94.6% (279/295)  IGHV1-18*01  181  .....G..GC.............C..........................C...............C.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  G  G  F  W  W  I  E  I  E  F  R  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_10475  273  ACGGCCGTGTATTACTGTGCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTCTGGGGCCAAGGGACCACGGTCACC  362
V  94.6% (279/295)  IGHV1-18*01  271  .........................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  90.0% (9/10)     IGHD2-21*01  6    -----------------------------...G......---------------------------------------------------  15
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------------...................................  53

                                               
                                       V  S  S 
                    Query_10475  363  GTCTCCTCA  371
J  100.0% (44/44)   IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_191134

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTGCCTTCGGTCCGA	ATAGCAGT	TGACAGGGGCTTCTC	CGGCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGCCTTCGGTCCGAATAGCAGTTGACAGGGGCTTCTCCGGCATGGACGTC	ARLPSVRIAVDRGFSGMDV	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  L  N  S  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10476  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGACTCCTTGAATAGTTACTTCTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.8% (223/243)  IGHV4-59*01  49   .............................T.G....A.C.G........A.....G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  D  S  E  T  T  K  Y  N  P  S  L  R  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_10476  91   TGGATTGGCTATATCTATGACAGTGAGACCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.8% (223/243)  IGHV4-59*01  139  ........G.........T......G..G......C................A....................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  T  V  S  S  V  T  P  A  D  T  A  V  Y  F  C  A  R  L  P  S  V  R  I  A  V  D 
                    Query_10476  181  CAGTTCTCCCTGACGGTGTCCTCTGTGACCCCTGCGGACACGGCCGTGTATTTCTGTGCGAGATTGCCTTCGGTCCGAATAGCAGTTGAC  270
V  91.8% (223/243)  IGHV4-59*01  229  .............A.C..AG..........G.....................A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  5    ------------------------------------------------------------------------------........----  12

                                      ----------------------->                                 
                                       R  G  F  S  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10476  271  AGGGGCTTCTCCGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  327
J  97.8% (45/46)    IGHJ6*02     17   -----------...T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_191135

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GGGCATCAGTGC	CTATGGTTCGGGGAG	CGC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGGGCATCAGTGCCTATGGTTCGGGGAGCGCTATGGACGTC	VKGISAYGSGSAMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10477  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCCATGCCATGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (230/247)  IGHV3-23*01  47   ...........................................C...T...................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  N  G  G  T  T  H  Y  A  D  S  V  Q  G  R  S  I  I  S  R  D  N  S  
                    Query_10477  91   AGTGGGTCTCAGTTATTAGTGGCAATGGTGGTACCACACATTACGCAGACTCCGTGCAGGGCCGGTCCATCATCTCCAGAGACAATTCCA  180
V  93.1% (230/247)  IGHV3-23*01  137  ............C.........T.G........G....T.C...............A.........T..C....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  T  L  R  A  G  D  T  A  V  Y  Y  C  V  K  G  I  S  A  Y  G  S  
                    Query_10477  181  AGAACACCTTGTATCTGCAAATGAACACCCTGAGAGCCGGGGACACGGCCGTATATTACTGTGTGAAGGGCATCAGTGCCTATGGTTCGG  270
V  93.1% (230/247)  IGHV3-23*01  227  .......GC..................G...........A.......................C...-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (15/15)   IGHD3-10*01  7    -------------------------------------------------------------------------------...........  17

                                      ---------------->                                 
                                      G  S  A  M  D  V  W  G  Q  G  T  T  V  T  V  P  S 
                    Query_10477  271  GGAGCGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCCCCTCA  320
D  100.0% (15/15)   IGHD3-10*01  18   ....----------------------------------------------  21
J  97.7% (42/43)    IGHJ6*02     20   -------.....................................T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_191132

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           338     4e-95
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGAA	AGTGGTTA	CTA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGAAAGTGGTTACTATGAAGCTTTTGATATC	ARSESGYYEAFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  L  S  S  Y  D  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10478  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCCTCAGCAGCTATGATATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.5% (232/248)  IGHV3-30*04  47   ...................................A..T....T.......C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  I  I  S  Y  D  G  G  N  K  N  Y  A  D  S  V  R  G  R  F  T  L  S  R  D  N  S  
                    Query_10478  91   AGTGGGTGTCAATTATATCATATGATGGAGGAAATAAAAATTACGCAGACTCCGTGAGGGGCCGATTCACCTTGTCCAGGGACAATTCCA  180
V  93.5% (232/248)  IGHV3-30*04  137  ........G..G.................A.T......T.C................A.............A.C.....A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  F  L  Q  M  N  S  L  S  A  E  D  T  A  V  Y  Y  C  A  R  S  E  S  G  Y  Y  E  
                    Query_10478  181  AGAACACGCTGTTTCTGCAAATGAACAGCCTGAGCGCTGAGGACACGGCTGTGTATTACTGTGCGAGATCGGAAAGTGGTTACTATGAAG  270
V  93.5% (232/248)  IGHV3-30*04  227  ............A.....................A.................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-22*01  17   --------------------------------------------------------------------------........--------  24
J  94.0% (47/50)    IGHJ3*02     1    -------------------------------------------------------------------------------------...T.  5

                                      ---------->                                  
                                      A  F  D  I  W  G  P  G  T  M  V  T  V  S  S  
                    Query_10478  271  CTTTTGATATCTGGGGCCCAGGGACAATGGTCACCGTCTCCTCAG  315
J  94.0% (47/50)    IGHJ3*02     6    ..................A.....................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_191133

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_10479  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_10479  91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_10479  181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_10479  271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_191130

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            372     2e-105
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AGGAGACTTCTAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAAGGAGACTTCTATTACTACTACTACACTTTGGACGTC	AREGDFYYYYYTLDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10480  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  97.6% (244/250)  IGHV3-9*01   47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  D  T  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10480  91   AGTGGGTCTCAGGTATTAGTTGGAACAGTGATACCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (244/250)  IGHV3-9*01   137  .........................T....G..G........................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  R  E  G  D  F  Y  Y  Y  
                    Query_10480  181  AGAACTCCCTGTATCTGCAAATGAATAGTCTGAGACCTGAGGACACGGCCTTGTATTACTGTGCAAGAGAAGGAGACTTCTATTACTACT  270
V  97.6% (244/250)  IGHV3-9*01   227  .........................C.........G..............................A...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
J  94.7% (54/57)    IGHJ6*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---------------->                                 
                                      Y  Y  T  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10480  271  ACTACACTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  94.7% (54/57)    IGHJ6*02     13   .....GG.A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_227294

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           313     1e-87
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGACTAG	TGGAACGAC	CCTTGTGT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGACTAGTGGAACGACCCTTGTGTACTGGTTCGACCCC	ARTSGTTLVYWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	220	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  N  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  Q  L  E 
                    Query_10481  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAATACCTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAACAACTGGAG  90
V  91.7% (220/240)  IGHV4-59*08  49   ..................A.....................G..GT...................................GGG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  T  T  Y  S  P  S  L  K  S  R  V  T  M  S  I  D  T  S  K  N 
                    Query_10481  91   TGGATTGGTTATATCTCTTACAGTGGGAGCACCACTTATAGCCCCTCCCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCCAAGAAC  180
V  91.7% (220/240)  IGHV4-59*08  139  ........G.......A.................AC..C.A...........................A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  T  S  G  T  T  L  V  Y  W 
                    Query_10481  181  CAGTTCTCCCTGAGGCTGACGTCTGTGACCGCCGCAGACACGGCCATTTATTACTGTGCGCGGACTAGTGGAACGACCCTTGTGTACTGG  270
V  91.7% (220/240)  IGHV4-59*08  229  .............A.....GC........................G.G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD1-1*01   9    --------------------------------------------------------------------.........-------------  17
J  95.8% (46/48)    IGHJ5*02     4    -------------------------------------------------------------------------------------.....  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  I  L  V  A  V  S  S  
                    Query_10481  271  TTCGACCCCTGGGGCCAGGGAATCCTGGTCGCCGTCTCCTCAG  313
J  95.8% (46/48)    IGHJ5*02     9    ......................C.......A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_191138

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           405     3e-115
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCT	CAGTGGCTGGTA	TCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCTCAGTGGCTGGTATCCCTAC	ARPLSGWYPY	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_10482  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGAACCTTCAGCAGTTA  90
V  94.8% (274/289)  IGHV1-69*01  6    ...........................................................................C...........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  I  P  M  F  G  T  A  N  Y  A  Q
                    Query_10482  91   TGCTATCACGTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGCATCATCCCTATGTTTGGAACAGCCAACTACGCACA  180
V  94.8% (274/289)  IGHV1-69*01  96   ........GC..........................................G.G...........C.....T.....A...........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  R  D  R  V  T  V  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  K  F  E  D  T  A
                    Query_10482  181  GAAGTTCCGGGACAGAGTCACGGTTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAAATTTGAGGACACGGC  270
V  94.8% (274/289)  IGHV1-69*01  186  ........A..G..........A...................................................G..C............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        V  Y  Y  C  A  R  P  L  S  G  W  Y  P  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10482  271  CGTCTATTACTGTGCGAGACCTCTCAGTGGCTGGTATCCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  347
V  94.8% (274/289)  IGHV1-69*01  276  ...G...............----------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                           
D  100.0% (12/12)   IGHD6-19*01  9    ------------------------............-----------------------------------------  20
J  100.0% (38/38)   IGHJ4*02     11   ---------------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_191139

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           341     5e-96
IGHD2-21*01                                                                                           10.3    117  
IGHJ2*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-21*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TA	GGTGA	AGCCCAGTC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGTGAAGCCCAGTCCTGGTTCTTCGATCTC	ARVGEAQSWFFDL	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10483  1    ACCCTGTCCCTCACCTGCAGTGTTTCTGGTGACTCAATTAGTGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (231/244)  IGHV4-59*01  49   ...................C...C.......G...C..C...A...A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  T  S  E  N 
                    Query_10483  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTCGACACGTCCGAGAAC  180
V  94.7% (231/244)  IGHV4-59*01  139  .................................A.............................A..........A.........A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       K  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  G  E  A  Q  S  W  F  F 
                    Query_10483  181  AAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTAGGTGAAGCCCAGTCCTGGTTCTTC  270
V  94.7% (231/244)  IGHV4-59*01  229  C..................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*01  14   ------------------------------------------------------------------.....-------------------  18
J  94.0% (47/50)    IGHJ2*01     4    --------------------------------------------------------------------------------.....A....  13

                                      ----->                                  
                                       D  L  W  G  P  G  A  L  V  T  V  S  S  
                    Query_10483  271  GATCTCTGGGGCCCTGGCGCCCTGGTCACTGTCTCCTCAG  310
J  94.0% (47/50)    IGHJ2*01     14   .............G....A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_93713

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            355     3e-100
IGHD2-21*02                                                                                           21.8    0.042 
IGHJ6*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGCATTGGTTAT	TGACTGCTATT	TT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCATTGGTTATTGACTGCTATTTTTACGGTATGGACGTC	AREKTAALVIDCYFYGMDV	239	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	24	0	0	100
FR3-IMGT	125	238	114	112	2	0	98.2
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	233	230	3	0	98.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 
                    Query_10484  14   TGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATA  103
V  98.7% (230/233)  IGHV3-7*01   64   ..........................T...............................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_10484  104  AAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTT  193
V  98.7% (230/233)  IGHV3-7*01   154  .................................................T.......................................G  243
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-----------------------CDR3-IMGT------------
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  L  V  I  D  C  Y  F  Y 
                    Query_10484  194  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCATTGGTTATTGACTGCTATTTTTAC  283
V  98.7% (230/233)  IGHV3-7*01   244  .....................................................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (11/11)   IGHD2-21*02  16   --------------------------------------------------------------------------...........-----  26
J  91.7% (44/48)    IGHJ6*02     15   ---------------------------------------------------------------------------------------...  17

                                      ----------->                                 
                                       G  M  D  V  W  G  Q  G  T  V  V  T  F  S  S 
                    Query_10484  284  GGTATGGACGTCTGGGGCCAAGGGACCGTTGTCACCTTCTCCTCA  328
J  91.7% (44/48)    IGHJ6*02     18   ...........................ACG......G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_242866

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         341     5e-96
IGHD1-1*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCA	GTACAAC	AGTGGGAACTTCTTCCT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGCAGTACAACAGTGGGAACTTCTTCCTACTCCTTTGACTTC	ARDRSTTVGTSSYSFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  T  A  S  G  F  T  F  S  G  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10485    1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTGGATATGCAATGCACTGGGTCCGCCAGGCGCCAGGCAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-30-3*01  47   ....................G.......................A.C.....T....................T................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  F  D  G  N  N  K  Y  Y  S  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_10485    91   AGTGGGTGGCAGTTATATCATTTGATGGAAACAATAAATACTACTCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-30-3*01  137  .....................A........G.............G............A................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                        K  N  T  L  Y  L  Q  M  T  S  L  R  P  E  D  T  A  M  F  F  C  A  R  D  R  S  T  T  V  G  
                    Query_10485    181  AGAACACACTCTATCTGCAAATGACCAGCCTGAGACCTGAGGACACGGCTATGTTTTTCTGTGCGAGAGATCGCAGTACAACAGTGGGAA  270
V  93.6% (234/250)  IGHV3-30-3*01  227  .......G..G.............A..........G..............G...A..A............--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-1*01     2    ---------------------------------------------------------------------------.......--------  8

                                        GT-------------------->                                  
                                        T  S  S  Y  S  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10485    271  CTTCTTCCTACTCCTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  95.8% (46/48)    IGHJ4*02       1    ---------...A........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_82159

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD2-21*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGGGGG	ATTGTGATGGT	ATTAACTGCTTCCCCTGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGGATTGTGATGGTATTAACTGCTTCCCCTGGTACTACTATTATGGAATGCACGTC	AKGDCDGINCFPWYYYYGMHV	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	221	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  L  Y  G  G  S  F  S  G  H  Y  W  I  W  L  R  Q  S  P  G  K  G  L  E 
                    Query_10486  1    ACCCTGTCCCTCACCTGCGCTCTCTATGGTGGGTCCTTCAGTGGTCACTACTGGATTTGGCTCCGCCAGTCCCCCGGGAAGGGGCTGGAG  90
V  91.7% (221/241)  IGHV4-34*01  49   .....................G.......................T.........GC...A........C....A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  K  Y  N  S  S  L  K  S  R  V  A  M  S  I  D  A  S  K  S 
                    Query_10486  91   TGGATTGGGGAAATCAATCATAGTGGAAGCACGAAGTACAACTCGTCCCTCAAGAGTCGAGTCGCCATGTCAATAGACGCGTCCAAGAGT  180
V  91.7% (221/241)  IGHV4-34*01  139  ................................C..C......C....................A....A...G.....A.........AC  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  Y  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  G  D  C  D  G  I  N  C  F 
                    Query_10486  181  CAATTCTACCTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAAGGGGGATTGTGATGGTATTAACTGCTTC  270
V  91.7% (221/241)  IGHV4-34*01  229  ..G....C...........G...........................G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (10/11)    IGHD2-21*01  6    -------------------------------------------------------------------......G....------------  16

                                      MGT-------------------------->                                 
                                       P  W  Y  Y  Y  Y  G  M  H  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_10486  271  CCCTGGTACTACTATTATGGAATGCACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  333
J  91.2% (52/57)    IGHJ6*02     6    ------........C..C..T...G...........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_336209

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_10487  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG....T..............A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10487  91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.4% (228/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_10487  181  CAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  ...............C...G...........................G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_10487  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_336208

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           425     3e-121
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAAGCCGGC	TACTGTGGTTCGGGG	GAGTT	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAAGCCGGCTACTGTGGTTCGGGGGAGTTGTATGGACGTC	AREKPATVVRGSCMDV	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	111	3	0	97.4
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	284	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  F  T  F  T 
                    Query_10488  4    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTTCACCTTTACC  93
V  95.9% (284/296)  IGHV1-18*01  1    .....T.....G...................................................................A..........  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  K  T  N  Y 
                    Query_10488  94   ACCTATGGCATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCCCTTACAATGGTAAAACAAACTAT  183
V  95.9% (284/296)  IGHV1-18*01  91   .G......T....G..........................................A.........G.............C.........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       G  Q  K  V  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  T  S  L  R  S  D  D 
                    Query_10488  184  GGACAGAAGGTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGACGAGCCTGAGATCTGACGAC  273
V  95.9% (284/296)  IGHV1-18*01  181  .C.......C............................................................G...................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  E  K  P  A  T  V  V  R  G  S  C  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_10488  274  ACGGCCGTGTATTACTGTGCGAGAGAAAAGCCGGCTACTGTGGTTCGGGGGAGTTGTATGGACGTCTGGGGCCAAGGGACCACGGTCACC  363
V  95.9% (284/296)  IGHV1-18*01  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  93.3% (14/15)    IGHD3-10*01  5    -----------------------------------....A..........----------------------------------------  19
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------------...................................  53

                                               
                                       V  S  S 
                    Query_10488  364  GTCTCCTCA  372
J  100.0% (44/44)   IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_82152

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD4-17*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCGGGGAGAGATT	CTACGGTGACT	CGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCGGGGAGAGATTCTACGGTGACTCGGTTGACTGC	AKVGERFYGDSVDC	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  F  S  D  Y  D  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10489  1    GGTCCCTGAGACTCTCCTGTACAGCCTCAGGATTCATCTTTAGCGATTATGACCTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-23*01  47   ....................G.......T.......C.......AGC....C.A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  N  D  V  G  D  R  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  S  
                    Query_10489  91   AGTGGGTCTCAACTATTAATGATGTTGGTGATAGGACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACACTTCCA  180
V  92.4% (230/249)  IGHV3-23*01  137  ...........G......G..G.AG.....G...C.................................................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  K  A  E  D  T  A  V  Y  Y  C  A  K  V  G  E  R  F  Y  G  
                    Query_10489  181  AGAACACACTGTATCTGCAAATGAACAGCCTGAAAGCCGAGGACACGGCCGTATATTATTGTGCGAAAGTCGGGGAGAGATTCTACGGTG  270
V  92.4% (230/249)  IGHV3-23*01  227  .......G.........................G........................C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD4-17*01  4    ----------------------------------------------------------------------------------........  11

                                      ------------->                                  
                                      D  S  V  D  C  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_10489  271  ACTCGGTTGACTGCTGGGGCCAGGGGACCCTGGTCATCGTCTCCTCAG  318
D  100.0% (11/11)   IGHD4-17*01  12   ...---------------------------------------------  14
J  92.9% (39/42)    IGHJ4*02     7    ------......A............A..........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_82153

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           276     3e-76
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ3*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGCCCCATT	TTACTATGATAGTCGTGGTT	TTCACCA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGCCCCATTTTACTATGATAGTCGTGGTTTTCACCATGATGTCTTTGATCTG	ARRAPFYYDSRGFHHDVFDL	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	210	34	0	86.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  L  S  G  G  P  I  T  G  S  Y  W  N  W  F  R  Q  S  P  G  M  G  L  E 
                    Query_10490  1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGGCCCCATTACTGGCTCCTACTGGAACTGGTTCCGGCAGTCCCCAGGTATGGGACTGGAG  90
V  86.1% (210/244)  IGHV4-59*08  49   .....................G...........T....C.G.A.T.A........G....A........C.......G.A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  T  G  A  T  Y  Y  N  P  S  F  K  S  R  V  T  I  S  V  D  T  S  K  T 
                    Query_10490  91   TGGATTGGCTATGTCTACTACACTGGGGCCACCTACTACAACCCCTCGTTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGACG  180
V  86.1% (210/244)  IGHV4-59*08  139  ........G...A....T....G....AG....A.............CC...................A.....A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  T  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  R  A  P  F  Y  Y  D  S  R 
                    Query_10490  181  CAGTTTACCCTGAACTTGAGTTCTGTCACCGCCGCAGACACGGCCGTCTATTTCTGTGCCAGACGGGCCCCATTTTACTATGATAGTCGT  270
V  86.1% (210/244)  IGHV4-59*08  229  .....CT.......GC....C.....G....................G....A......G....--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.0% (19/20)    IGHD3-22*01  4    --------------------------------------------------------------------------.............A..  19

                                      GT------------------------>                                  
                                       G  F  H  H  D  V  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10490  271  GGTTTTCACCATGATGTCTTTGATCTGTGGGGCCAAGGGACATTGGTCACCGTCTCTTCAG  331
D  95.0% (19/20)    IGHD3-22*01  20   ....---------------------------------------------------------  23
J  90.0% (45/50)    IGHJ3*01     1    -----------.....CT......G.C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_336207

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_10491  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCGCCGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C....AGG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_10491  91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  M  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_10491  181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCATGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  90.6% (221/244)  IGHV4-59*01  229  ...T...............G.........................G......A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_10491  271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_336206

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            311     4e-87
IGHD2-21*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCGACCGAGGA	ACTGCTA	ACCTCTTCGAGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACCGAGGAACTGCTAACCTCTTCGAGAATGCTCTTAGTATC	AADRGTANLFENALSI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  R  G  H  I  T  S  S  H  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_10492  1    ACCCTGTCCCTCACCTGCGCTGTCTCTCGTGGCCACATCACCAGTAGTCACTGGTGGAACTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.9% (221/243)  IGHV4-4*02   49   ...........................G.....TC.....G.......A.........GT..............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  Q  I  Y  Q  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  K  S  R 
                    Query_10492  91   GAGTGGATTGGACAAATTTATCAGAGTGGGAGCACCAATTATAACCCGTCCCTCAGGAGTCGAGTCACCATTTCAGTGGACAAGTCCAGG  180
V  90.9% (221/243)  IGHV4-4*02   139  ...........GG....C.....T..............C..C.............A...............A.....A..........A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  L  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  A  D  R  G  T  A  N  L  F 
                    Query_10492  181  AACCTCTTCTCCCTGACGCTGACCTCTGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGGCCGACCGAGGAACTGCTAACCTCTTC  270
V  90.9% (221/243)  IGHV4-4*02   229  ....AG..........A.....G...........................G............---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD2-21*02  18   ---------------------------------------------------------------------------.......--------  24

                                      ----------------->                                  
                                       E  N  A  L  S  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10492  271  GAGAATGCTCTTAGTATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  93.8% (45/48)    IGHJ3*02     3    ----.....T..GA......................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_82156

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10493  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (239/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  P  S  K  N 
                    Query_10493  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACCCGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  ....................................................................A.........A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_10493  181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  .............A.............................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10493  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_82157

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            338     5e-95
IGHD3-3*01                                                                                            12.2    32   
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ACCCGTGTGATGCC	TACCATCTTTGG	TG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACCCGTGTGATGCCTACCATCTTTGGTGACTACGGTATGGACGTC	ARTRVMPTIFGDYGMDV	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  D  S  I  T  S  S  H  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10494  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCATCACCAGTAGTCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.9% (231/246)  IGHV4-4*01   49   ...............................G........G.......A.........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  R  T  R  V  T  I  S  I  D  K  S  K 
                    Query_10494  91   GAGTGGATTGGGGAAATCTATTATAGTGGGACCACGAACTACAACCCGTCCCTCAGGACTCGAGTTACCATATCAATAGACAAGTCCAAG  180
V  93.9% (231/246)  IGHV4-4*01   139  .....................C.........G...C...................A..G......C.........G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  L  C  A  R  T  R  V  M  P  T  I  F 
                    Query_10494  181  AATCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATCTCTGTGCCAGAACCCGTGTGATGCCTACCATCTTT  270
V  93.9% (231/246)  IGHV4-4*01   229  ..C...............................................G...TG......G...------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD3-3*01   5    --------------------------------------------------------------------------------...G..T...  14

                                      -------------------->                                 
                                       G  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10494  271  GGTGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
D  83.3% (10/12)    IGHD3-3*01   15   ..----------------------------------------------------  16
J  100.0% (50/50)   IGHJ6*02     13   ----..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_82154

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           339     2e-95
IGHD1-1*01                                                                                            12.2    31   
IGHJ3*01                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCCTTCGAGGAAAC	TACAAC	N/A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCTTCGAGGAAACTACAACGATGCTTTTGATGTC	ARLLRGNYNDAFDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  H  G  E  S  F  S  G  Y  Y  W  K  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10495  1    ACCCTGTCCCTCACCTGCACTGTCCATGGTGAGTCCTTCAGTGGTTACTACTGGAAATGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAA  90
V  94.7% (230/243)  IGHV4-34*01  49   ..................G.....T......G.......................GC................................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_10495  91   TGGATTGGGGAAATCAATCATACTGGAAGCACCAACTACAACCCGTCCCTGAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAA  180
V  94.7% (230/243)  IGHV4-34*01  139  ......................G...........................C......................................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  L  R  G  N  Y  N  D  A 
                    Query_10495  181  CAATTCTCCCTGAACCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTTCTGTGCGAGACTCCTTCGAGGAAACTACAACGATGCT  270
V  94.7% (230/243)  IGHV4-34*01  229  ..G...........G................................G....A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-1*01   3    ------------------------------------------------------------------------------......------  8
J  89.8% (44/49)    IGHJ3*01     2    ------------------------------------------------------------------------------------......  7

                                      -------->                                  
                                       F  D  V  W  G  Q  G  P  R  V  T  V  S  S  
                    Query_10495  271  TTTGATGTCTGGGGCCAAGGGCCTCGGGTTACCGTCTCTTCAG  313
J  89.8% (44/49)    IGHJ3*01     8    .....................A.AAT...C.............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_336202

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           346     2e-97
IGHD1-1*01                                                                                            10.3    117  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTA	GCCCCCAACCCCGATGGCA	ACAAC	CTA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGCCCCCAACCCCGATGGCAACAACCTACC	SPQPRWQQPT	249	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	249	1	1	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  I  F  S  T  T  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10496  1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCATTTTCAGTACCACCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-15*01  47   .......T...............G............C........A.G.........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  I  D  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_10496  91   AGTGGGTTGGCCGTATTAAAAGCAAAATTGATGGTGAGACAACAGACTACGCTGCACCCGTGAAGGGCAGATTCACCATCTCAAGAGATG  180
V  94.4% (235/249)  IGHV3-15*01  137  ...........................C........G...........................A.........................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  E  T  E  D  T  A  L  Y  Y  C  S  P  Q  P  R  W  Q  
                    Query_10496  181  ATTCAAAAAACACGCTGTATTTGCAAATGAACAGCCTGGAAACCGAGGACACAGCCCTTTACTACTGTAGCCCCCAACCCCGATGGCAAC  270
V  94.4% (235/249)  IGHV3-15*01  227  ....................C.................A.................G.G..T.......---------------------  295
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  100.0% (5/5)     IGHD1-1*01   4    ----------------------------------------------------------------------------------------..  5

                                      ------->                                  
                                      Q  P  T  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10496  271  AACCTACCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
D  100.0% (5/5)     IGHD1-1*01   6    ...---------------------------------------  8
J  100.0% (36/36)   IGHJ5*02     16   ------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_209081

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD6-13*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAC	CTTACGGGACGGG	GCAGTAGCTGG	CCTAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACCTTACGGGACGGGGCAGTAGCTGGCCTACGACTAT	ARPYGTGQ*LAYDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  M  S  Y
                    Query_10497  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTATGAGTTA  90
V  93.4% (271/290)  IGHV5-51*01  6    .............................................................................G.....CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  E  T  T  Y  S  P
                    Query_10497  91   TTGGATCGCCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACTCTGAAACCACATACAGCCC  180
V  93.4% (271/290)  IGHV5-51*01  96   C.......G..............T...............................A...................T....G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  T  S  L  K  A  S  D  T  A
                    Query_10497  181  GTCGTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAATACCGCATACCTACAGTGGACAAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (271/290)  IGHV5-51*01  186  ...C...C....................................GC.....C.....G.......GC.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  P  Y  G  T  G  Q  *  L  A  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10497  271  CATGTATTACTGTGCGCGACCTTACGGGACGGGGCAGTAGCTGGCCTACGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.4% (271/290)  IGHV5-51*01  276  ................A...---------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                       
D  90.9% (10/11)    IGHD6-13*01  8    ---------------------------------....C......---------------------------------------------  18
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_346908

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           434     4e-124
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	111	3	0	97.4
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	294	286	8	0	97.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 
                    Query_10498  1    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACC  90
V  97.3% (286/294)  IGHV5-51*03  1    .....G........G....................................................................C......  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  F  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y 
                    Query_10498  91   AGCTTCTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATAC  180
V  97.3% (286/294)  IGHV5-51*03  91   ....A...................................................G............................G....  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D 
                    Query_10498  181  AGCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGAC  270
V  97.3% (286/294)  IGHV5-51*03  181  ..................................C...........................................A...........  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-------------CDR3-IMGT------------>                                
                                       T  A  M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_10498  271  ACCGCCATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  356
V  97.3% (286/294)  IGHV5-51*03  271  ........................--------------------------------------------------------------  294
                                       T  A  M  Y  Y  C  A  R                                                               
D  93.8% (15/16)    IGHD6-6*01   3    -------------------------......C.........---------------------------------------------  18
J  100.0% (39/39)   IGHJ4*02     8    -----------------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_346905

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           397     8e-113
IGHD2-2*01                                                                                            21.8    0.047 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	GGATTTTGTCATAGTACCAACTG	TCCGGGTGCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGGATTTTGTCATAGTACCAACTGTCCGGGTGCGTGCTTTTGATATC	ARQDFVIVPTVRVRAFDI	289	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	68	3	0	95.8
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	46	5	0	90.2
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	292	273	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  I  F  T  N  
                    Query_10499  5    TGCAGCTGGTGCAGTCTGGAGCAGAACTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACATCTTCACCAACT  94
V  93.5% (273/292)  IGHV5-51*01  5    .........................GG.......................................G...........G...T....G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  L  G  W  V  R  Q  M  P  G  G  G  L  E  W  M  G  I  I  Y  P  R  D  S  D  T  R  Y  S  
                    Query_10499  95   ACTGGCTTGGCTGGGTGCGCCAGATGCCCGGGGGAGGCCTGGAATGGATGGGGATCATCTATCCTCGTGACTCTGATACCAGATACAGTC  184
V  93.5% (273/292)  IGHV5-51*01  95   .....A.C........................AA.........G.....................G......................C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  I  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  D  S  L  K  A  S  D  S  
                    Query_10499  185  CGTCATTCCAAGGCCAGATCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGGACAGCCTGAAGGCCTCGGACAGCG  274
V  93.5% (273/292)  IGHV5-51*01  185  ....C............G...........................G...................AG....................C..  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><----------------------CDR3-IMGT--------------------->                      
                                      A  M  Y  Y  C  A  R  Q  D  F  V  I  V  P  T  V  R  V  R  A  F  D  I  W  G  Q  G  T  V  V  
                    Query_10499  275  CCATGTATTACTGTGCGAGACAGGATTTTGTCATAGTACCAACTGTCCGGGTGCGTGCTTTTGATATCTGGGGCCAAGGGACAGTGGTGA  364
V  93.5% (273/292)  IGHV5-51*01  275  ......................--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  82.6% (19/23)    IGHD2-2*01   2    ----------------------....A....AG........G...---------------------------------------------  24
J  95.7% (45/47)    IGHJ3*02     4    -------------------------------------------------------............................A....C.  38

                                                  
                                      T  V  S  S  
                    Query_10499  365  CCGTCTCTTCAG  376
J  95.7% (45/47)    IGHJ3*02     39   ............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_346907

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD1-1*01                                                                                            14.1    8.7  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCCTAGGACCGGATAAAGAC	ACAACTG	AGGACGCCCTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCTAGGACCGGATAAAGACACAACTGAGGACGCCCTTTACTTTGACTCC	ATLGPDKDTTEDALYFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	228	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10500  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAATTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (228/246)  IGHV3-23*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  N  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10500  91   AGTGGGTCTCAGCTATCAGTGGTAGTGGTAATAACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.7% (228/246)  IGHV3-23*01  137  ................T............GG..G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  S  T  L  F  L  Q  I  H  G  L  R  A  D  D  T  A  I  Y  L  C  A  T  L  G  P  D  K  D  T  
                    Query_10500  181  GGAGCACACTGTTTCTGCAGATACACGGCCTGAGAGCCGACGACACGGCCATATATTTATGTGCGACCCTAGGACCGGATAAAGACACAA  270
V  92.7% (228/246)  IGHV3-23*01  227  A..A...G....A......A..GA..A.............G.........G......AC.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD1-1*01   4    --------------------------------------------------------------------------------------....  7

                                      IMGT--------------------->                                  
                                      T  E  D  A  L  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10500  271  CTGAGGACGCCCTTTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (7/7)     IGHD1-1*01   8    ...---------------------------------------------------------  10
J  97.8% (45/46)    IGHJ4*02     3    --------------..........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_346906

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         360     1e-101
IGHD3-10*01                                                                                           10.3    115   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GA	GGGGA	CAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAGGGGACATTATGGACGTC	ARGGDIMDV	244	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10501    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  H  S  G  L  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  R  S 
                    Query_10501    91   CTGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACAGGTCC  180
V  96.0% (240/250)  IGHV4-30-2*01  139  ..............G......T...........AG..C.T...A......................G.......................  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                         K  N  Q  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  D  I  M  D  V 
                    Query_10501    181  AAGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAGGGGACATTATGGACGTC  270
V  96.0% (240/250)  IGHV4-30-2*01  229  ...........C.......A..................................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01    16   ------------------------------------------------------------------------.....-------------  20
J  100.0% (43/43)   IGHJ6*02       20   --------------------------------------------------------------------------------..........  29

                                                                         
                                         W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10501    271  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  303
J  100.0% (43/43)   IGHJ6*02       30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_346901

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD3-3*01                                                                                            35.3    4e-06
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCG	ATTACGACTTTTGGAGTGGATATT	CCTTG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCGATTACGACTTTTGGAGTGGATATTCCTTG	AKDRDYDFWSGYSL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  P  F  D  N  Y  V  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10502  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCCGGATTCCCCTTTGACAACTATGTCTTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-23*01  47   .....................C......T......A.....AG..G.....C.A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  I  G  N  G  G  T  T  Y  Y  E  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_10502  91   AGTGGGTCTCGAGTATTATTGGTAATGGTGGTACCACATACTACGAAGACTCCGTGAAGGGCCGGTTCAGCATCTCCAGAGACAATTCCA  180
V  91.2% (228/250)  IGHV3-23*01  137  ..........AGC.....G.....G........G...........C.......................C....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  R  R  L  R  A  E  D  T  A  V  Y  F  C  A  K  D  R  D  Y  D  F  W  
                    Query_10502  181  AGAATACCCTGTATCTGCAAATGAGGAGACTGAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAAAGATCGCGATTACGACTTTTGGA  270
V  91.2% (228/250)  IGHV3-23*01  227  ....C..G................AC..C............................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  91.7% (22/24)    IGHD3-3*01   3    ---------------------------------------------------------------------------.......T.......  17

                                      ------------->                                  
                                      S  G  Y  S  L  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_10502  271  GTGGATATTCCTTGTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  318
D  91.7% (22/24)    IGHD3-3*01   18   ....T....---------------------------------------  26
J  94.1% (32/34)    IGHJ4*02     15   --------------............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_346900

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           386     2e-109
IGHD3-16*01                                                                                           14.1    9.5   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACAAGCGGGCGGCACC	TTTGGGG	CGAGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTAC	ARGQAGGTFGASDY	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	46	5	0	90.2
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	104	10	0	91.2
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	271	24	0	91.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  S  F  N 
                    Query_10503  1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAATGAAGGTCTCCTGCAAGGCTTCCGGTTACAGCTTTAAC  90
V  91.9% (271/295)  IGHV1-18*01  1    .....T.............................................G......................T.......C.....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  G  I  T  W  M  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  A  Y  N  G  N  T  K  Y 
                    Query_10503  91   GACTATGGTATCACTTGGATGCGACAGGCCCCTGGACAGGGGCCTGAGTGGATGGGATGGATCAGCGCATATAATGGTAACACAAAGTAT  180
V  91.9% (271/295)  IGHV1-18*01  91   AG...........GC...G...................A....T........................T..C..............C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  E  R  L  Q  G  R  L  I  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_10503  181  TCAGAGAGGCTCCAGGGCAGACTCATCATGACCACAGACACATCCACGAGCACAGCCTACATGGAATTGAGGAGCCTGAGATCTGACGAC  270
V  91.9% (271/295)  IGHV1-18*01  181  G..C...A.............G...C.......................................GC.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  G  Q  A  G  G  T  F  G  A  S  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_10503  271  ACGGCCGTCTATTATTGTGCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  360
V  91.9% (271/295)  IGHV1-18*01  271  ........G.....C..........-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD3-16*01  15   ------------------------------------------.......-----------------------------------------  21
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------------------....................................  44

                                          
                                       S  
                    Query_10503  361  TCAG  364
J  100.0% (40/40)   IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_346903

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           316     2e-88
IGHD3-10*01                                                                                           10.3    118  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCTCGGTCCCCT	TATGG	CATTGAGACGGACTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGTCCCTCGGTCCCCTTATGGCATTGAGACGGACTTT	VRVPRSPYGIETDF	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	224	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  V  S  S  F  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10504  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCATCGTCAGTAGTTTCTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (224/246)  IGHV3-53*01  47   ....................................C.........CAA........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  R  G  G  S  A  Q  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  E  S  R  
                    Query_10504  91   AGTGGGTCTCAGTTATTTATCGCGGTGGCAGCGCACAGTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCTAGAGACGAATCCAGGA  180
V  91.1% (224/246)  IGHV3-53*01  137  ....................A.......T...A..T.C..C................................C......A.T....A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  V  Y  L  Q  M  N  R  L  R  V  E  D  T  A  T  Y  Y  C  V  R  V  P  R  S  P  Y  G  I  
                    Query_10504  181  ACACGGTGTATCTTCAAATGAACCGCCTGAGAGTCGAGGACACGGCCACATATTACTGTGTGAGAGTCCCTCGGTCCCCTTATGGCATTG  270
V  91.1% (224/246)  IGHV3-53*01  227  .....C.................A.........C.............GTG..........C.....------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (5/5)     IGHD3-10*01  8    --------------------------------------------------------------------------------.....-----  12

                                      ---------->                                  
                                      E  T  D  F  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_10504  271  AGACGGACTTTTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  315
J  97.1% (33/34)    IGHJ4*02     15   -----------......................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_209087

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD3-3*01                                                                                            33.4    2e-05 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGGGGGGCCTT	CGATTTTTGGAGTGGTT	TCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGGGGGGCCTTCGATTTTTGGAGTGGTTTCCACTTTGACTCC	ARLGGAFDFWSGFHFDS	292	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	71	3	0	95.9
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	106	8	0	93
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	294	277	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  T  S  G  Y  S  F  T  
                    Query_10505  5    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGCTTTACCA  94
V  94.2% (277/294)  IGHV5-51*01  2    .................................A..................................GG....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  H  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  M  G  I  I  Y  P  G  V  S  D  T  R  Y  
                    Query_10505  95   CCCACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACATGGGGATCATCTATCCTGGTGTCTCTGATACCAGATACA  184
V  94.2% (277/294)  IGHV5-51*01  92   G.T.........G...................................GG......................A.................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  V  S  A  A  Y  L  Q  W  R  S  L  K  A  S  D  
                    Query_10505  185  GACCGTCCTTCCAAGGCCAAGTCACCATCTCAGCCGACAAGTCCGTCAGTGCCGCCTACCTGCAGTGGAGGAGCTTGAAGGCCTCGGACA  274
V  94.2% (277/294)  IGHV5-51*01  182  .C.................G........................A....CA...................C...C...............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  M  Y  Y  C  A  R  L  G  G  A  F  D  F  W  S  G  F  H  F  D  S  W  G  Q  G  T  L  V  
                    Query_10505  275  CCGCCATGTATTATTGTGCGAGACTAGGGGGGGCCTTCGATTTTTGGAGTGGTTTCCACTTTGACTCCTGGGGCCAGGGAACCCTGGTCA  364
V  94.2% (277/294)  IGHV5-51*01  272  .............C..........------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (17/17)   IGHD3-3*01   7    -------------------------------------.................------------------------------------  23
J  97.8% (44/45)    IGHJ4*02     4    ---------------------------------------------------------.........A.......................  36

                                                  
                                      T  V  S  S  
                    Query_10505  365  CCGTCTCCTCAG  376
J  97.8% (44/45)    IGHJ4*02     37   ............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_42790

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           297     8e-83
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCACCGGTGG	AGCAATGGCTGG	GGAACATACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCACCGGTGGAGCAATGGCTGGGGAACATACTATAATTACGGTATGGACGCC	ARGHRWSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	21	3	6	70
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	221	21	6	89.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  T  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_10506  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGCCCTTCACTGACAGTGGTTATTATTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  89.1% (221/248)  IGHV4-34*12  49   .......................C..T......T......------.......C..C....G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  I  D  T  S 
                    Query_10506  91   CTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAACCCGTCCCTCCAGAGTCGAGTCACCATATCAATAGACACGTCC  180
V  89.1% (221/248)  IGHV4-34*12  133  .....G.............T.......AG.....G......................A....................G...........  222
                                       L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  W  S  N  G 
                    Query_10506  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGGGGCCACCGGTGGAGCAATGGC  270
V  89.1% (221/248)  IGHV4-34*12  223  ....................GC............C........................C........----------------------  290
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_10506  271  TGGGGAACATACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  93.8% (45/48)    IGHJ6*02     15   ------------------.............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_116543

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           346     2e-97
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGGAGAAG	ACGATTTTTGGAGTGG	N/A	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGGAGAAGACGATTTTTGGAGTGGTTACTTCTACCTCCACGGGATGCACGTC	ARVGEDDFWSGYFYLHGMHV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  A  S  Y  G  M  H  W  A  R  Q  A  P  G  K  G  L  
                    Query_10507  1    GGTCCCTGAGACTCTCCTGTTCAGCGTCTGGATTCACCTTCGCTAGTTATGGCATGCACTGGGCCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-33*01  47   ....................G....................AG...C................T..........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  T  T  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10507  91   AGTGGGTGGCAGTTATTTGGTATGATGGAACTACTAAGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCC  180
V  94.4% (235/249)  IGHV3-33*01  137  ................A.............G..A...A...................................................A  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      Q  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  E  D  D  F  W  
                    Query_10507  181  AGAACACGTTGTATCTGCAAATGAACAGCCTGCGAGCCGAAGACACGGCTGTCTATTACTGTGCGAGAGTCGGAGAAGACGATTTTTGGA  270
V  94.4% (235/249)  IGHV3-33*01  227  ........C.......................A.......G...........G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (16/16)   IGHD3-3*01   6    ------------------------------------------------------------------------------............  17

                                      R3-IMGT------------------------>                                 
                                      S  G  Y  F  Y  L  H  G  M  H  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10507  271  GTGGTTACTTCTACCTCCACGGGATGCACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  100.0% (16/16)   IGHD3-3*01   18   ....-------------------------------------------------------------  21
J  90.2% (55/61)    IGHJ6*02     2    ----.....A....TA.T....T...G......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_42792

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           330     1e-92
IGHD2-15*01                                                                                           12.2    31   
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	TTGTAG	CCA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGTAGCCAACAACTGGTTCGACCCC	ARVVANNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  Y  I  R  S  G  G  Y  Y  W  T  W  I  R  Q  Y  P  G  K  G  
                    Query_10508  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTACATCAGAAGTGGTGGTTACTACTGGACCTGGATCCGCCAGTACCCAGGGAAGGGCC  93
V  92.4% (230/249)  IGHV4-31*03  50   .....TCC...A..................G..C......C...................G.............C...............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  P  T  I  S  V  D  T  S  
                    Query_10508  94   TGGAGTGGATTGGGAACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACCTACCATATCAGTGGACACGTCTA  183
V  92.4% (230/249)  IGHV4-31*03  140  ..............T..................................................GT............A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  N  S  V  T  A  A  E  T  A  V  Y  Y  C  A  R  V  V  A  N  N  W  F  
                    Query_10508  184  AAAACCAGTTCTCCCTGAAATTGAACTCTGTGACTGCCGCGGAAACGGCCGTCTATTACTGTGCGAGAGTTGTAGCCAACAACTGGTTCG  273
V  92.4% (230/249)  IGHV4-31*03  230  .G.................GC...G..................C........G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-15*01  7    ---------------------------------------------------------------------......---------------  12
J  100.0% (51/51)   IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10508  274  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (51/51)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_116541

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           338     5e-95
IGHD6-19*01                                                                                           31.5    5e-05
IGHJ6*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	TAGCAGTGGCTGGTAC	GATGGGGAGTTT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAGCAGTGGCTGGTACGATGGGGAGTTTTACGGTATGGACGTC	ASSSGWYDGEFYGMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	229	13	0	94.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  I  N  Y  Y  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_10509  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATTATTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  94.6% (229/242)  IGHV4-59*08  49   ...............................G......C.G..G...................................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10509  91   TGGATTGGGTATATCCATTACAGTGGGATCACCAAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  94.6% (229/242)  IGHV4-59*08  139  ...............T............G......C......................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  L  S  L  R  L  R  S  V  T  A  A  D  T  A  M  Y  Y  C  A  S  S  S  G  W  Y  D  G  E  F 
                    Query_10509  181  CAGTTGTCCCTGAGGCTGAGGTCTGTGACCGCCGCAGACACGGCCATGTACTACTGTGCGAGTAGCAGTGGCTGGTACGATGGGGAGTTT  270
V  94.6% (229/242)  IGHV4-59*08  229  .....C.......A......C........................G....T...........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (16/16)   IGHD6-19*01  6    --------------------------------------------------------------................------------  21

                                      -------------->                                 
                                       Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10509  271  TACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  100.0% (48/48)   IGHJ6*02     15   ................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_116546

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         414     5e-118
IGHD1-26*01                                                                                           10.3    138   
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATGCCTCCACCCGTAC	GTGGG	GTTTTC	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGCCTCCACCCGTACGTGGGGTTTTCACAACTGGTTCGACCCC	ARHASTRTWGFHNWFDP	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  N  T  F  T  S  Y
                    Query_10510    1    GCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGAAACACCTTTACCAGCTA  90
V  95.8% (277/289)  IGHV5-10-1*01  6    ........................G................................................T...G............  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  T  D  S  Y  P  D  Y  S  P
                    Query_10510    91   CTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTACTGACTCTTATCCCGACTACAGTCC  180
V  95.8% (277/289)  IGHV5-10-1*01  96   .................................................................G..........A..A.......C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  P  I  S  S  D  K  S  I  S  T  A  Y  L  Q  G  S  S  L  K  A  S  D  T  A
                    Query_10510    181  GTCCTTCCAAGGCCACGTCCCCATCTCCTCTGACAAGTCCATCAGCACTGCCTACCTGCAGGGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.8% (277/289)  IGHV5-10-1*01  186  ...................A.......AG................................T............................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------------CDR3-IMGT-------------------->                          
                                          I  Y  Y  C  A  R  H  A  S  T  R  T  W  G  F  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V
                    Query_10510    271  CATATATTACTGTGCGAGACATGCCTCCACCCGTACGTGGGGTTTTCACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGT  360
V  95.8% (277/289)  IGHV5-10-1*01  276  ...G...............-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD1-26*01    7    ------------------------------------.....-------------------------------------------------  11
J  100.0% (51/51)   IGHJ5*02       1    -----------------------------------------------...........................................  43

                                                
                                          S  S  
                    Query_10510    361  CTCCTCAG  368
J  100.0% (51/51)   IGHJ5*02       44   ........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_116547

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            397     8e-113
IGHD3-10*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGAC	TGGTTCGGGGA	CTT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTAC	ARVTGSGTYSFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  G  S  Y
                    Query_10511  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCGGCAGCTA  90
V  93.8% (272/290)  IGHV1-8*02   6    ..................G...............................................................AC......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  D  Y  A  Q
                    Query_10511  91   TGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATGAATCCTAACAGTGGGAACACAGACTATGCACA  180
V  93.8% (272/290)  IGHV1-8*02   96   .........................A..................................C...........T.......G.........  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  Y  M  E  L  S  S  L  G  S  A  D  T  A
                    Query_10511  181  GAAGTTCCGGGGCAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCTACATGGAGCTGAGTAGTCTGGGATCTGCCGACACGGC  270
V  93.8% (272/290)  IGHV1-8*02   186  ........A.......................A...C..C.T........................C..C...A......AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  V  T  G  S  G  T  Y  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10511  271  CGTCTATTACTGTGCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  93.8% (272/290)  IGHV1-8*02   276  ...G................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (11/11)   IGHD3-10*01  10   ------------------------...........---------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    --------------------------------------...A......C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_116544

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           371     7e-105
IGHD2-15*01                                                                                           37.2    1e-06 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGACTCCC	GGATATTGTCGTGGTGGTAGGTGCT	CCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGACTCCCGGATATTGTCGTGGTGGTAGGTGCTCCGGCTACTACTACGGTTTGGACGTC	ARDRTPGYCRGGRCSGYYYGLDV	244	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10512  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGGTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.2% (244/251)  IGHV4-31*03  49   ..................................................T.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S 
                    Query_10512  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  97.2% (244/251)  IGHV4-31*03  139  ..........................................................A.......G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       E  N  Q  F  S  L  K  L  G  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  R  T  P  G  Y  C 
                    Query_10512  181  GAGAACCAGTTCTCCCTGAAGCTGGGCTCTGTGACTGCCGCGGACACGGCCATATATTACTGTGCGAGAGATCGGACTCCCGGATATTGT  270
V  97.2% (244/251)  IGHV4-31*03  229  A.......................A..........................G.G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.0% (23/25)    IGHD2-15*01  2    ---------------------------------------------------------------------------------.........  10

                                      ---CDR3-IMGT----------------------------->                                 
                                       R  G  G  R  C  S  G  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10512  271  CGTGGTGGTAGGTGCTCCGGCTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  345
D  92.0% (23/25)    IGHD2-15*01  11   A..........C....-----------------------------------------------------------  26
J  98.2% (54/55)    IGHJ6*02     8    --------------------.............A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_42797

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         389     2e-110
IGHD4-4*01                                                                                            14.1    9.6   
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-4*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATAGAGAC	GACTATAGTA	CGTCGTCCTC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAGAGACGACTATAGTACGTCGTCCTCCGACCCC	ARHRDDYSTSSSDP	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	77	72	71	1	0	98.6
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	106	8	0	93
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	291	270	21	0	92.8


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  A  N 
                    Query_10513    6    GTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCAGGATACAGCTTTGCTAAT  95
V  92.8% (270/291)  IGHV5-10-1*01  4    .......................................................................T............A.C.GC  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         H  W  I  T  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  M  L  D  P  S  D  S  Y  S  N  Y  S 
                    Query_10513    96   CACTGGATCACCTGGGTCCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGATGCTTGATCCCAGTGACTCTTATAGCAACTACAGT  185
V  92.8% (270/291)  IGHV5-10-1*01  94   T.........G......G......A..............................G.A.......T.............C.........C  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  Q  G  H  V  T  F  S  A  D  K  T  I  N  T  A  Y  L  H  W  S  S  L  K  A  S  D  P 
                    Query_10513    186  CCGTCCTTCCAAGGCCACGTCACCTTCTCAGCTGACAAGACCATCAACACTGCCTACCTACATTGGAGCAGCCTGAAGGCCTCGGACCCC  275
V  92.8% (270/291)  IGHV5-10-1*01  184  ........................A..............T......G............G..G........................A..  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><----------------CDR3-IMGT--------------->                                 
                                         A  I  Y  Y  C  A  R  H  R  D  D  Y  S  T  S  S  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_10513    276  GCCATATATTACTGTGCGAGACATAGAGACGACTATAGTACGTCGTCCTCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  365
V  92.8% (270/291)  IGHV5-10-1*01  274  .....G...............---------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                      
D  90.0% (9/10)     IGHD4-4*01     2    ------------------------------.....C....--------------------------------------------------  11
J  100.0% (41/41)   IGHJ5*02       11   --------------------------------------------------........................................  50

                                         
                                         
                    Query_10513    366  G  366
J  100.0% (41/41)   IGHJ5*02       51   .  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_42799

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           324     8e-91
IGHD3-3*01                                                                                            12.2    32   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCG	CGATTT	GCCCAAGAAAGGGGCTCCTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCGCGATTTGCCCAAGAAAGGGGCTCCTGCTTTGACTGC	ARSSRFAQERGSCFDC	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  V  I  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  Q  N  
                    Query_10514  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGTCATCATCAGGAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGCAGAACC  93
V  91.9% (227/247)  IGHV4-31*02  50   .....TCC...A..................G.TC......C....................C.....................A..GG..  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  R  S  V  D  T  S  
                    Query_10514  94   TGGAGTGGATTGGGTACATCTATTATAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAAGATCAGTGGACACGTCTA  183
V  91.9% (227/247)  IGHV4-31*02  140  .........................C.......G.............C......................C.T......A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  R  F  A  Q  E  
                    Query_10514  184  AGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGGTCTTCGCGATTTGCCCAAGAAA  273
V  91.9% (227/247)  IGHV4-31*02  230  .........................C.............................T...........-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-3*01   7    --------------------------------------------------------------------------......----------  12

                                      T------------------>                                  
                                      R  G  S  C  F  D  C  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_10514  274  GGGGCTCCTGCTTTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  327
J  95.5% (42/44)    IGHJ4*02     5    ----------........A............................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_229445

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           339     2e-95
IGHD3-9*01                                                                                            18.0    0.59 
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCAG	CGAGATTC	ACTGGTTCTTAT	TCTGCAGTG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCGCAGCGAGATTCACTGGTTCTTATTCTGCAGTGGACTAC	TAARFTGSYSAVDY	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	255	7	6	1	0	85.7
Total	N/A	N/A	255	236	19	0	92.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  Q  F  S  F  I  D  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10515  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTCAATTCAGTTTCATTGACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.5% (236/255)  IGHV3-15*01  47   .......T............G........GG.....C.....G.A.............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  L  K  S  K  A  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  I  I  S  R  D  
                    Query_10515  91   AGTGGGTTGGCCGTCTGAAAAGCAAAGCTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCATCATCTCAAGAGATG  180
V  92.5% (236/255)  IGHV3-15*01  137  ..............A.T.........A................................................C..............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  L  N  T  L  Y  L  Q  M  M  S  L  K  T  E  D  T  A  I  Y  Y  C  T  A  A  R  F  T  G  
                    Query_10515  181  ATTCACTAAACACGCTGTATCTGCAAATGATGAGCCTGAAAACCGAGGACACAGCCATATATTACTGCACCGCAGCGAGATTCACTGGTT  270
V  92.5% (236/255)  IGHV3-15*01  227  .....AA.......................AC........................G.G........T...A...---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  91.7% (11/12)    IGHD3-9*01   17   -----------------------------------------------------------------------------------.......  23

                                      IMGT--------------->                                  
                                      S  Y  S  A  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10515  271  CTTATTCTGCAGTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  91.7% (11/12)    IGHD3-9*01   24   A....-------------------------------------------------  28
J  100.0% (40/40)   IGHJ4*02     9    --------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_116549

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           420     7e-120
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	74	0	0	100
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	281	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  
                    Query_10516  4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCA  93
V  95.9% (281/293)  IGHV5-51*03  2    .................................................................................G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  
                    Query_10516  94   GCTACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACA  183
V  95.9% (281/293)  IGHV5-51*03  92   ............G.......................A...................................A....G.....A......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  
                    Query_10516  184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACA  273
V  95.9% (281/293)  IGHV5-51*03  182  .................................................C...........G...............A.....T......  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_10516  274  CCGCCGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  363
V  95.9% (281/293)  IGHV5-51*03  272  .....A.G...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD6-19*01  5    --------------------------............----------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_10516  364  CCTCAG  369
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_47565

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           304     9e-85
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	219	25	0	89.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E  
                    Query_10517  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAGT  93
V  89.8% (219/244)  IGHV4-59*02  50   .....TCC...A....C.............G..........AG...C.......G.............C...........G.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N  
                    Query_10517  94   GGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAACC  183
V  89.8% (219/244)  IGHV4-59*02  140  ......G....A...A.T.......G.G............C..C....................CA........................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------CDR3-IMGT--------->    
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W  
                    Query_10517  184  AGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGGG  273
V  89.8% (219/244)  IGHV4-59*02  230  ..........G.A.................................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  90.0% (45/50)    IGHJ3*02     1    ----------------------------------------------------------------------...T..T..T..........  20

                                                                    
                                      G  P  G  T  M  V  T  V  S  S  
                    Query_10517  274  GCCCAGGGACAATGGTCACCGTGTCTTCAG  303
J  90.0% (45/50)    IGHJ3*02     21   ...A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_1630

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	269	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_10518  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTCAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  94.1% (269/286)  IGHV5-51*01  6    ................................................G.................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  P  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_10518  91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCCGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  94.1% (269/286)  IGHV5-51*01  96   ......................A.......G.......T.....G..........................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  T  S  V  N  T  A  Y  L  Q  W  S  T  L  G  A  S  D  T  A
                    Query_10518  181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACACGTCCGTCAACACCGCCTACCTGCAGTGGAGCACCCTGGGGGCCTCCGACACCGC  270
V  94.1% (269/286)  IGHV5-51*01  186  ....................C..............A....A...G.......................G....AA......G........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10518  271  CATATATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  94.1% (269/286)  IGHV5-51*01  276  ...G............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_326934

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         322     2e-90
IGHD2-2*01                                                                                            35.3    4e-06
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGGGGAG	TATTGTAGTAGTACCAACTGC	ATG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGGGGAGTATTGTAGTAGTACCAACTGCATGTACGGTCTGGACGTC	ARGGEYCSSTNCMYGLDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  D  I  Y  S  W  N  W  I  R  Q  P  P  G  M  G 
                    Query_10519    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCTCCAGTGATATTTACTCCTGGAACTGGATCCGGCAGCCACCAGGGATGGGC  90
V  91.5% (227/248)  IGHV4-30-2*01  49   .......................................AG.....G.GG...........G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  V  G  H  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  R  S 
                    Query_10519    91   CTGGAGTGGGTTGGCCACATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCCAGAGTCGAGTCACCATCTCAGTTGACAGGTCC  180
V  91.5% (227/248)  IGHV4-30-2*01  139  .........A....GT..................G......................A................A.....A.........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  K  H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  E  Y  C  S  S 
                    Query_10519    181  AAGAAACACTTCTCGTTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGGGGGGGGGAGTATTGTAGTAGT  270
V  91.5% (227/248)  IGHV4-30-2*01  229  .....C..G.....CC...A.....G...........................G..............----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  95.2% (20/21)    IGHD2-2*01     5    ------------------------------------------------------------------------------............  16

                                        -IMGT--------------------->                                 
                                         T  N  C  M  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10519    271  ACCAACTGCATGTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
D  95.2% (20/21)    IGHD2-2*01     17   ....G....---------------------------------------------------  25
J  97.9% (47/48)    IGHJ6*02       15   ------------......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_119649

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10520  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_10520  91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_10520  181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_10520  271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_119641

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD3-16*01                                                                                           12.2    33   
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GCCGCGAAAATCGGTCTTTGGACTACTTATCCC	TGGGGG	GGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCCGCGAAAATCGGTCTTTGGACTACTTATCCCTGGGGGGGGCGACTGGTTCGACCCC	ARGPRKSVFGLLIPGGGDWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  D  Y  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10521  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCGATTACTATTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  94.7% (232/245)  IGHV4-34*01  49   .......................................AG.GGT..C..........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  G  A  T  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10521  91   TGGATTGGGGAAATTAATCATGGTGCAACGACCAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-34*01  139  ..............C......A...G..GC............C...............................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  K  S  V  F  G  L 
                    Query_10521  181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGCCGCGAAAATCGGTCTTTGGACTA  270
V  94.7% (232/245)  IGHV4-34*01  229  ....................C............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      -IMGT--------------------------->                                  
                                       L  I  P  G  G  G  D  W  F  D  P  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_10521  271  CTTATCCCTGGGGGGGGCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  337
D  100.0% (6/6)     IGHD3-16*01  17   --------......-----------------------------------------------------  22
J  97.9% (47/48)    IGHJ5*02     4    -------------------................................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_119643

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           316     2e-88
IGHD3-3*01                                                                                            14.1    8.0  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TGC	GGAGTGG	ACTTATG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGCGGAGTGGACTTATGGACTCC	ARLRSGLMDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	14	7	0	66.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  I  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  N  G 
                    Query_10522  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGACTCCATCAACATTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCGGGGAACGGA  90
V  90.4% (226/250)  IGHV4-39*01  49   .............................T.G........G..G..G.................................A.....G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  V  S  N  S  G  N  T  Y  Y  N  P  S  L  K  R  R  V  T  V  S  V  D  T  S 
                    Query_10522  91   CTGGAGTGGCTTGGGAGTGTCTCGAACAGTGGTAACACCTACTACAACCCGTCCCTCAAGCGTCGGGTCACCGTATCCGTAGACACGTCC  180
V  90.4% (226/250)  IGHV4-39*01  139  .........A........A...ATT.T.....G.G.........................A....A......A.................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       N  H  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  R  S  G  L  M  D 
                    Query_10522  181  AATCATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTTCTGTGCGAGACTGCGGAGTGGACTTATGGAC  270
V  90.4% (226/250)  IGHV4-39*01  229  ..GA.C.............A......................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   15   -------------------------------------------------------------------------.......----------  21
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10522  271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_119644

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           347     7e-98
IGHD3-16*01                                                                                           12.2    30   
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTTTCC	TGGGGG	N/A	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTCCTGGGGGTGCTTATGATATC	ARHFPGGAYDI	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	233	11	0	95.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  S  Y  F  C  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_10523  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTTCTGCAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  95.5% (233/244)  IGHV4-59*08  50   .....TCC...A..................G.................A...G.....................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_10523  94   GGATTGGGTATATCTCTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAACC  183
V  95.5% (233/244)  IGHV4-59*08  140  ...............A.........................................................A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  K  L  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  H  F  P  G  G  A  Y  D  I  
                    Query_10523  184  AGTTCTCCCTGAAGCTGACCTCTGTGTCCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATTTTCCTGGGGGTGCTTATGATATCT  273
V  95.5% (233/244)  IGHV4-59*08  230  ..................G.......A.....................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------......--------------  22
J  97.9% (46/47)    IGHJ3*02     4    ----------------------------------------------------------------------------.....T........  17

                                                                       
                                      W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10523  274  GGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  306
J  97.9% (46/47)    IGHJ3*02     18   .................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_119645

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD3-10*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	226	15	0	93.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_10524  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAGT  93
V  93.8% (226/241)  IGHV4-59*01  50   .....TCC...A.............................AG..............................A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_10524  94   GGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  93.8% (226/241)  IGHV4-59*01  140  ...............AT........G.G..............................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W  
                    Query_10524  184  AGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGC  273
V  93.8% (226/241)  IGHV4-59*01  230  ............A......C.........G................G..............-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  93.3% (14/15)    IGHD3-10*01  11   -----------------------------------------------------------------..........G....----------  25
J  97.9% (46/47)    IGHJ5*02     5    -------------------------------------------------------------------------------------....T  9

                                      ------->                                  
                                      L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10524  274  TCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.9% (46/47)    IGHJ5*02     10   ..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_119646

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         338     5e-95
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	N/A	TTCGCCACACTTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTTCGCCACACTTCTTACTACTTCTACGCTTTGGACGTC	ARVRHTSYYFYALDV	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  H  P  P  G  K  G 
                    Query_10525    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCATCCCCCCGGGAAGGGC  90
V  93.2% (233/250)  IGHV4-30-4*01  49   ..................A..............................A........................G.....A.........  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  Y  I  G  Y  V  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  V  S  I  L  V  D  T  S 
                    Query_10525    91   CTGGAGTACATTGGGTACGTCTATTACAGTGGGACTACCTACTATAATAAGTCTCTCAAGAGTCGAGTTAGCATATTAGTAGACACGTCC  180
V  93.2% (233/250)  IGHV4-30-4*01  139  .......GG.........A...............GC........C..CCC...C................C.....C.............  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  H  T  S  Y  Y 
                    Query_10525    181  AAGAACCAGTTCTCCCTGAAGCTGAGATCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGTTCGCCACACTTCTTACTAC  270
V  93.2% (233/250)  IGHV4-30-4*01  229  ..........................C...........................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  93.0% (53/57)    IGHJ6*02       6    ------------------------------------------------------------------------------------......  11

                                        ----------------->                                 
                                         F  Y  A  L  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_10525    271  TTCTACGCTTTGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  321
J  93.0% (53/57)    IGHJ6*02       12   .A.....G.A..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_1634

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*09                                                                                           347     8e-98
IGHD6-19*01                                                                                           10.3    132  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*09	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGTCTTCCCGAGCGGGCT	CAGTG	AAT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTCTTCCCGAGCGGGCTCAGTGAATCC	ARGVFPSGLSES	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	256	34	0	88.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  S  S  S  I  Y
                    Query_10526  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGGCAGTTCCAGCATCTA  90
V  88.3% (256/290)  IGHV1-69*09  6    ..................G..........A....................................T..........CC.T.....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  T  W  F  R  Q  A  P  G  Q  G  L  E  W  M  G  N  V  V  P  L  F  S  I  P  T  Y  A  Q
                    Query_10526  91   TGTTATCACCTGGTTCCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGAACGTCGTCCCTTTGTTTAGTATACCAACCTACGCACA  180
V  88.3% (256/290)  IGHV1-69*09  96   ..C.....G....G.G...................................A.GGA..A.....A.CC..G.....G...A.........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  I  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  V  Q  G  R  I  T  I  T  A  D  T  S  T  S  T  A  Y  M  E  L  S  S  L  T  S  D  A  T  A
                    Query_10526  181  GAAGGTCCAAGGCAGAATCACGATTACCGCGGACACATCCACGAGCACGGCGTACATGGAACTGAGCAGCCTGACATCTGACGCCACGGC  270
V  88.3% (256/290)  IGHV1-69*09  186  ....T....G......G..................A............A..C........G.............G......G.A......  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  R  G  V  F  P  S  G  L  S  E  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10526  271  CGTCTATTATTGTGCGAGAGGGGTCTTCCCGAGCGGGCTCAGTGAATCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  88.3% (256/290)  IGHV1-69*09  276  ...G.....C..........---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  100.0% (5/5)     IGHD6-19*01  9    ---------------------------------------.....---------------------------------------  13
J  100.0% (36/36)   IGHJ5*02     16   -----------------------------------------------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_266878

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_10527  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.0% (223/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  V  S  V  D  T  S  K  S 
                    Query_10527  91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCGTTTCAGTAGACACGTCCAAGAGC  180
V  91.0% (223/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T....A.A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  I  S  L  S  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_10527  181  CAGATCTCCCTGAGCCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTACTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  91.0% (223/245)  IGHV4-59*01  229  ...T.........AG........................A.......G..T..............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10527  271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_266879

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           367     6e-104
IGHJ3*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TCTTCATCCGAGGGGTCCGGCCCCC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTCATCCGAGGGGTCCGGCCCCCGATGCTTTTGACATT	ARDLHPRGPAPDAFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	263	28	0	90.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  I  S  C  K  A  S  G  Y  T  F  T  K  Y
                    Query_10528  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCATCTGGATACACCTTCACCAAATA  90
V  90.4% (263/291)  IGHV1-46*01  6    ..................G.................................G.................................GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  L  H  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  L  I  N  P  S  G  G  I  T  A  Y  A  Q
                    Query_10528  91   CTATCTTCACTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGTTGGGATTAATAAACCCTAGTGGTGGTATCACAGCGTACGCACA  180
V  90.4% (263/291)  IGHV1-46*01  96   ....A.G.............................G.........A.....A....C................G....AGC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  L  T  M  S  R  D  T  S  T  S  T  V  Y  I  D  L  S  S  L  T  S  A  D  T  A
                    Query_10528  181  GAAGTTCCAGGGAAGACTCACCATGAGCAGGGACACGTCCACTTCTACAGTCTACATCGACCTGAGCAGCCTGACCTCTGCGGACACGGC  270
V  90.4% (263/291)  IGHV1-46*01  186  ............C...G.........C...............GAGC...........G..G.............GA....A.........  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  D  L  H  P  R  G  P  A  P  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S
                    Query_10528  271  CGTATACTACTGTGCGAGAGATCTTCATCCGAGGGGTCCGGCCCCCGATGCTTTTGACATTTGGGGCCAAGGGACAATGGTCACCGTCTC  360
V  90.4% (263/291)  IGHV1-46*01  276  ...G..T..............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
J  95.9% (47/49)    IGHJ3*02     2    ----------------------------------------------...........T..C.............................  45

                                           
                                        S  
                    Query_10528  361  TTCAG  365
J  95.9% (47/49)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_199329

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           282     4e-78
IGHD4-17*01                                                                                           12.2    32   
IGHJ2*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACAGTTTTTATCCCCCGTCG	GACTAC	TT	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAACAGTTTTTATCCCCCGTCGGACTACTTCTTCGATCTC	ARDNSFYPPSDYFFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	93	21	0	81.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  K  N  Y  N  M  N  W  V  R  Q  V  P  G  K  G  L  
                    Query_10529  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAAGAACTACAACATGAACTGGGTCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  86.0% (215/250)  IGHV3-21*01  47   ....................G.....................GT.G...T.G....................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  S  R  N  N  D  I  Q  Y  A  D  S  M  R  G  R  V  I  I  S  R  D  N  V  
                    Query_10529  91   AGTGGGTCTCATCGATTAGGAGTAGGAACAATGACATACAATACGCAGACTCAATGAGGGGCCGAGTCATCATCTCCAGGGACAATGTCA  180
V  86.0% (215/250)  IGHV3-21*01  137  .............C.....T.....T.GT.G.T.....T.C............G...A.......T...C.........A.....C.C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  S  S  L  Y  L  H  M  S  S  L  R  T  E  D  T  A  I  Y  F  C  A  R  D  N  S  F  Y  P  P  
                    Query_10529  181  ACAGTTCTCTGTATCTCCACATGAGCAGCCTGCGAACCGAGGACACGGCTATCTATTTCTGTGCGAGAGATAACAGTTTTTATCCCCCGT  270
V  86.0% (215/250)  IGHV3-21*01  227  .G.AC..A........G..A....A.......A..G..............G.G....A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      T------------------>                                  
                                      S  D  Y  F  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10529  271  CGGACTACTTCTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCTTCAG  324
D  100.0% (6/6)     IGHD4-17*01  2    --......----------------------------------------------  7
J  97.7% (43/44)    IGHJ2*01     10   ----------.......................................C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_199328

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           307     1e-85
IGHD1-26*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AACTTCCCGTCATC	AGTGGGAGC	CGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTCCCGTCATCAGTGGGAGCCGCGACTAC	AKLPVISGSRDY	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	249	4	4	0	0	100
Total	N/A	N/A	246	221	25	0	89.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_10530  4    CCCTGAGACTCTCCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  89.8% (221/246)  IGHV4-61*08  50   .....TCC...A........G.........G.......AG..G..G.....A......................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S  
                    Query_10530  94   TAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCCA  183
V  89.8% (221/246)  IGHV4-61*08  140  .G..................T..T................C.................G.......TC.........G.A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  L  P  V  I  S  G  S  
                    Query_10530  184  GGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAAACTTCCCGTCATCAGTGGGAGCC  273
V  89.8% (221/246)  IGHV4-61*08  230  A.................A.....GC..........................G.............------------------------  295
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD1-26*01  6    --------------------------------------------------------------------------------.........-  14

                                      ------->                                  
                                      R  D  Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_10530  274  GCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  315
J  97.5% (39/40)    IGHJ4*02     9    --.................................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_349480

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           291     5e-81
IGHD6-6*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	14	10	0	58.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	217	31	0	87.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  P  F  D  G  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10531  1    GGTCCCTGAGACTCTCCTGTACAGCCTCAGGCTTTCCCTTCGACGGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.5% (217/248)  IGHV3-21*01  47   ....................G.......T..A..CA.....AGTA.C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  D  
                    Query_10531  91   AGTGGGTCTCATCCATCAGTAGTAGAGGTGCATATATTCAGTATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGACA  180
V  87.5% (217/248)  IGHV3-21*01  137  ................T........TA..AGT..C..AT.C..C..A......G..A..............................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_10531  181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  87.5% (217/248)  IGHV3-21*01  227  ....C..................AA...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10531  271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_349483

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD1-7*01                                                                                            19.9    0.17 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTGCTGGCCTTAA	AACTGGAACT	TCCGCCTACCTCTT	CTACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTGCTGGCCTTAAAACTGGAACTTCCGCCTACCTCTTCTACAGTTTGGACGTC	ARSAGLKTGTSAYLFYSLDV	270	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	18	6	0	75
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	18	3	0	85.7
FR3-IMGT	147	269	123	107	7	9	87
CDR3-IMGT (germline)	270	275	6	6	0	0	100
Total	N/A	N/A	275	246	20	9	89.5


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  D  S  F  T  S  Y  Y  W  T  W  I  R  
                    Query_10532  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCTCTCACCTGCACTGTCTCTGGTGACTCCTTTACTTCTTACTACTGGACCTGGATCCGGC  90
V  89.5% (246/275)  IGHV4-59*01  26   ................T..............C......................G....A.C.G.AG...........G...........  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  D  S  E  T  T  N  Y  T  N  Y  N  P  S  L  K  S  
                    Query_10532  91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGCTATATCTATGACAGTGAGACCACCAACTACACCAACTATAACCCCTCCCTCAAGAGTC  180
V  89.5% (246/275)  IGHV4-59*01  116  ...............................G.........T......G..G..........---------...................  196
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y           N  P  S  L  K  S  

                                      -----------------------FR3-IMGT---------------------------------------------------------><
                                      R  V  T  F  S  V  D  T  S  M  N  H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  
                    Query_10532  181  GAGTCACCTTTTCAGTAGACACGTCCATGAATCACTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTG  270
V  89.5% (246/275)  IGHV4-59*01  197  ........A.A................A...C..G................GC.....................................  286
                                      R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  

                                      -------------------------CDR3-IMGT------------------------>                               
                                      A  R  S  A  G  L  K  T  G  T  S  A  Y  L  F  Y  S  L  D  V  W  G  Q  G  T  T  V  T  V  S  
                    Query_10532  271  CGAGATCTGCTGGCCTTAAAACTGGAACTTCCGCCTACCTCTTCTACAGTTTGGACGTCTGGGGCCAAGGGACCACCGTCACCGTCTCCT  360
V  89.5% (246/275)  IGHV4-59*01  287  .....-------------------------------------------------------------------------------------  291
                                      A  R                                                                                      
D  100.0% (10/10)   IGHD1-7*01   6    -------------------..........-------------------------------------------------------------  15
J  93.9% (46/49)    IGHJ6*02     14   -------------------------------------------....G..A.........................G.............  60

                                        
                                      S 
                    Query_10532  361  CA  362
J  93.9% (46/49)    IGHJ6*02     61   ..  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_349482

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           341     5e-96
IGHD2-21*01                                                                                           10.3    117  
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-21*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TA	GGTGA	AGCCCAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGTGAAGCCCAGTACTGGTACTTCGATCTC	ARVGEAQYWYFDL	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10533  1    ACCCTGTCCCTCACCTGCAGTGTTTCTGGTGACTCAATCAGTGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (231/244)  IGHV4-59*01  49   ...................C...C.......G...C......A...A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  T  S  E  N 
                    Query_10533  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTCGATACGTCCGAGAAC  180
V  94.7% (231/244)  IGHV4-59*01  139  .................................A.............................A..........A..C......A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       K  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  G  E  A  Q  Y  W  Y  F 
                    Query_10533  181  AAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTAGGTGAAGCCCAGTACTGGTACTTC  270
V  94.7% (231/244)  IGHV4-59*01  229  C..................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*01  14   ------------------------------------------------------------------.....-------------------  18
J  100.0% (52/52)   IGHJ2*01     2    ------------------------------------------------------------------------------............  13

                                      ----->                                  
                                       D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10533  271  GATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  310
J  100.0% (52/52)   IGHJ2*01     14   ........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_199322

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10534  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10534  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_10534  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10534  271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_199321

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAGGG	AGTAGTGGTTATT	TTAGCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAGGGAGTAGTGGTTATTTTAGCCTC	ARRGSSGYFSL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  K  G  S  D  F  S  F  A  R  N
                    Query_10535  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGATTTCAGTTTTGCCAGGAA  90
V  94.8% (275/290)  IGHV5-51*01  6    ..........................................G............................GA.A...C...A....CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  H  D  S  D  T  R  Y  S  P
                    Query_10535  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTAGAGTGGATGGGGAACATCTATCCTCATGACTCTGATACCAGATACAGCCC  180
V  94.8% (275/290)  IGHV5-51*01  96   .......................................G.............T..........GG........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  T  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_10535  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (275/290)  IGHV5-51*01  186  ...................................A.................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        M  Y  Y  C  A  R  R  G  S  S  G  Y  F  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10535  271  CATGTATTATTGTGCGAGACGAGGGAGTAGTGGTTATTTTAGCCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  94.8% (275/290)  IGHV5-51*01  276  .........C..........------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (13/13)   IGHD3-22*01  14   -------------------------.............------------------------------------------  26
J  100.0% (35/35)   IGHJ4*02     14   ---------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_266873

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           333     1e-93
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCCCCCTCCTGTG	GGTGACTAC	GTCAGCGGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCCCCCTCCTGTGGGTGACTACGTCAGCGGCCTTGACTAT	AKPPPVGDYVSGLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  S  T  S  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10536  1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCATGTTCAGCACCTCTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.1% (230/247)  IGHV3-30*18  47   ......................A.............CC.....T.G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10536  91   AGTGGGTGGCAGTCATTTCATATGATGGAAGTAATACGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGGGACAATTCCA  180
V  93.1% (230/247)  IGHV3-30*18  137  .............T..A...................AA.........................................A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  S  L  Q  M  S  S  L  R  P  E  D  S  G  V  Y  Y  C  A  K  P  P  P  V  G  D  Y  
                    Query_10536  181  AGAACACCCTGTCTCTGCAAATGAGCAGCCTGAGACCTGAGGACTCGGGTGTGTATTACTGTGCGAAGCCCCCTCCTGTGGGTGACTACG  270
V  93.1% (230/247)  IGHV3-30*18  227  .......G....A...........A..........G........A...C..................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD4-17*01  8    --------------------------------------------------------------------------------.........-  16

                                      ---------------->                                  
                                      V  S  G  L  D  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_10536  271  TCAGCGGCCTTGACTATTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  321
J  95.2% (40/42)    IGHJ4*02     7    ---------.......C................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_199327

Length=430
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     7e-119
IGHD3-9*01                                                                                            12.2    40    
IGHJ6*02                                                                                              108     1e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	ACGGGCCCCA	ATTTCGATA	GCACTTCGGAACGCTGGGGCCGACGAAAGAAAATATC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAACGGGCCCCAATTTCGATAGCACTTCGGAACGCTGGGGCCGACGAAAGAAAATATCACTACTACTACAACGGTATGGACGTC	ARQRAPISIALRNAGADERKYHYYYNGMDV	284	373	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  E  S  L  K  I  S  C  K  G  S  G  S  G  F  N  T  Y
                    Query_10537  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATCCGGCTTTAACACGTA  90
V  95.9% (279/291)  IGHV5-51*01  6    ...............................A..........................................A.A......C..GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  D  W  M  G  I  I  Y  V  D  D  S  D  T  T  Y  S  P
                    Query_10537  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGACTGGATGGGGATCATCTATGTTGATGACTCTGATACCACATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G.................................G..................CC..G..............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_10537  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------------------------CDR3-IMGT---------------------------
                                        M  Y  Y  C  A  R  Q  R  A  P  I  S  I  A  L  R  N  A  G  A  D  E  R  K  Y  H  Y  Y  Y  N
                    Query_10537  271  CATGTATTACTGTGCGAGACAACGGGCCCCAATTTCGATAGCACTTCGGAACGCTGGGGCCGACGAAAGAAAATATCACTACTACTACAA  360
V  95.9% (279/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  88.9% (8/9)      IGHD3-9*01   3    -------------------------------...A.....--------------------------------------------------  11
J  98.3% (58/59)    IGHJ6*02     4    -----------------------------------------------------------------------------...........T.  16

                                      ------------>                                 
                                        G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10537  361  CGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  406
J  98.3% (58/59)    IGHJ6*02     17   ..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 42287184


Query= Query_349488

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           319     2e-89
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GTCCTGGGTACTCT	GGAGTT	GC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCCTGGGTACTCTGGAGTTGCCTTTGACCAC	ARRPGYSGVAFDH	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  D  F  I  S  T  Y  Y  W  N  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_10538  1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGACTTCATCAGTACTTATTATTGGAATTGGATCCGGCAGGCCCCAGGGAAGGGACTGGAG  90
V  91.8% (224/244)  IGHV4-59*08  49   ...................C...........G..C........G...C..C....GC............C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  D  T  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_10538  91   TGGATTGGGTATATCTACTACAGTGGGAGCACCGACACCAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACCTCCAAGAAC  180
V  91.8% (224/244)  IGHV4-59*08  139  .................T...............A..TA..............................A...........G.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       H  F  S  L  K  L  S  S  V  T  A  A  G  T  A  V  Y  Y  C  A  R  R  P  G  Y  S  G  V  A  F 
                    Query_10538  181  CATTTCTCCCTGAAGTTGAGTTCTGTGACCGCCGCAGGCACGGCCGTCTATTACTGTGCGAGACGTCCTGGGTACTCTGGAGTTGCCTTT  270
V  91.8% (224/244)  IGHV4-59*08  229  ..G............C....C................A.........G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-10*01  18   ------------------------------------------------------------------------------......------  23
J  93.2% (41/44)    IGHJ4*02     5    --------------------------------------------------------------------------------------....  8

                                      ----->                                  
                                       D  H  W  G  Q  G  K  L  V  T  V  S  S  
                    Query_10538  271  GACCACTGGGGCCAGGGAAAACTGGTCACCGTCTCCTCAG  310
J  93.2% (41/44)    IGHJ4*02     9    ...T...............CC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_199325

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            294     6e-82
IGHD3-10*01                                                                                           12.2    32   
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GGGGAG	GGGGAATG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGAGGGGGAATGTACTACTACCACGGTTTGGACGTG	ARGGGGMYYYHGLDV	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	21	8	0	72.4
CDR1-IMGT	30	59	30	24	3	3	80
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	252	222	27	3	88.1


Alignments

                                      <---------FR1-IMGT----------><----------CDR1-IMGT---------><--------------------FR2-IMGT--
                                         S  L  R  L  S  C  V  I  S  G  D  S  V  S  S  T  T  N  W  W  T  W  V  R  Q  P  P  G  K  
                    Query_10539  1    GGTCCCTGAGACTCTCCTGTGTTATCTCTGGTGACTCCGTCAGCAGTACGACTAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGG  90
V  88.1% (222/252)  IGHV4-4*02   47   ..A.....TCC...A....C.C.G.........G....A.........G---...........G..........................  133
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S     N  W  W  S  W  V  R  Q  P  P  G  K  

                                      -------------------><-----CDR2-IMGT-----><------------------------------------------------
                                      G  P  Q  W  I  G  E  I  L  H  T  G  S  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  I  H  K  
                    Query_10539  91   GGCCGCAATGGATTGGGGAAATCCTTCATACTGGGAGTACCAACTACGACCCGTCCCTCAAGAGTCGAGTCACCATATCAATACACAAGT  180
V  88.1% (222/252)  IGHV4-4*02   134  ...T.G.G...............TA.....G......C.........A................................G..G......  223
                                      G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  

                                      ----FR3-IMGT----------------------------------------------------><-----------------CDR3-IM
                                      S  E  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  G  M  Y  
                    Query_10539  181  CCGAGAATCAGTTTTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGCGAGGGGGAGGGGGAATGTACT  270
V  88.1% (222/252)  IGHV4-4*02   224  ..A....C.....C.............G........................................A...------------------  295
                                      S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                    
D  100.0% (6/6)     IGHD3-10*01  16   ------------------------------------------------------------------------......------------  21
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------------------------------------------------....  9

                                      GT----------------->                                 
                                      Y  Y  H  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10539  271  ACTACCACGGTTTGGACGTGTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  94.7% (54/57)    IGHJ6*02     10   .....T.....A.......C.................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_73650

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           422     3e-120
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	111	3	0	97.4
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	283	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S 
                    Query_10540  1    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTTCC  90
V  95.6% (283/296)  IGHV5-51*01  1    .....G........G....................................................................C...A..  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y 
                    Query_10540  91   ACTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATAC  180
V  95.6% (283/296)  IGHV5-51*01  91   .GC..C.......G.................................................T.................A........  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 
                    Query_10540  181  AGCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGAC  270
V  95.6% (283/296)  IGHV5-51*01  181  ............C.....................C.......................................................  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T 
                    Query_10540  271  ACCGCCATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACC  360
V  95.6% (283/296)  IGHV5-51*01  271  ........G.................----------------------------------------------------------------  296
                                       T  A  M  Y  Y  C  A  R                                                                   
D  85.7% (12/14)    IGHD1-26*01  4    ----------------------------------...G....A.....------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ---------------------------------------------------......TA...............................  44

                                                        
                                       T  V  T  V  S  S 
                    Query_10540  361  ACGGTCACCGTCTCGTCA  378
J  94.7% (54/57)    IGHJ6*02     45   ..............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_114607

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTAG	CGCCATAG	TAGCAGCAGCTGGTAC	ACTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGCGCCATAGTAGCAGCAGCTGGTACACTATTTGACTAC	TSAIVAAAGTLFDY	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	241	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  T  F  S  G  S  V  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_10541  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGGTCACCTTCAGTGGCTCTGTTATGCACTGGGTCCGCCAGGCTTCCGGGAAGGGGCTGG  90
V  95.3% (241/253)  IGHV3-73*01  47   .........A......................T..................C..............................A.......  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  S  K  A  N  N  Y  A  T  A  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_10541  91   AGTGGGTTGGCCGTATTAGAAGCAAAGCTAACAATTACGCGACGGCGTATGCTGCGCCGGTGAAGGGCAGGTTCACCATCTCCAGAGATG  180
V  95.3% (241/253)  IGHV3-73*01  137  .................................G.........A..A.........T.......A.........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  E  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  M  Y  Y  C  T  S  A  I  V  A  A  
                    Query_10541  181  ATTCAGAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAAGACACGGCCATGTATTACTGTACTAGCGCCATAGTAGCAGCAG  270
V  95.3% (241/253)  IGHV3-73*01  227  .....A........................................G.........G................-----------------  299
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (16/16)   IGHD6-13*01  6    ---------------------------------------------------------------------------------.........  14

                                      IMGT--------------->                                  
                                      A  G  T  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10541  271  CTGGTACACTATTTGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (16/16)   IGHD6-13*01  15   .......-----------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------....................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_347764

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           353     1e-99
IGHD3-16*01                                                                                           12.2    37   
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CCGGGGGGGGGG	GGGGGA	AGACAATAGGTCTTATCGAAGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGGGACCGGGGGGGGGGGGGGGAAGACAATAGGTCTTATCGAAGGTAC	GRDRGGGGEDNRSYRRY	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	74	1	0	98.7
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	95	19	0	83.3
CDR3-IMGT (germline)	290	297	8	6	2	0	75
Total	N/A	N/A	296	261	35	0	88.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  I 
                    Query_10542  2    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCATC  91
V  88.2% (261/296)  IGHV1-46*01  1    .......................G................................................................C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       K  Y  F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  I  I  D  P  S  G  G  G  T  T  Y 
                    Query_10542  92   AAGTATTTTATGCATTGGGTGCGCCAGGCCCCTGGACAAGGACTTGAGTGGGTGGGAATAATCGACCCCAGTGGTGGCGGCACAACCTAC  181
V  88.2% (261/296)  IGHV1-46*01  91   .GC..C.A......C........A.................G.........A...........A....T........TA......G....  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  Q  F  K  G  K  V  T  M  T  R  D  T  S  T  T  T  V  Y  M  E  L  N  T  R  K  L  E  D 
                    Query_10542  182  GCACAGCAGTTCAAGGGCAAAGTCACCATGACCAGGGACACGTCCACGACCACTGTCTACATGGAATTGAACACCCGGAAGTTGGAGGAC  271
V  88.2% (261/296)  IGHV1-46*01  181  ......A.....C......G.............................G...A...........GC...G..G..T..GA.CT......  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------------CDR3-IMGT-------------------->                     
                                       P  A  V  F  Y  W  G  R  D  R  G  G  G  G  E  D  N  R  S  Y  R  R  Y  W  G  Q  G  T  L  V 
                    Query_10542  272  CCGGCCGTTTTTTACTGGGGGAGGGACCGGGGGGGGGGGGGGGAAGACAATAGGTCTTATCGAAGGTACTGGGGTCAGGGAACCCTGGTC  361
V  88.2% (261/296)  IGHV1-46*01  271  A.......G.A......T.C...A..----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD3-16*01  18   --------------------------------------......----------------------------------------------  23
J  97.3% (36/37)    IGHJ4*02     12   ------------------------------------------------------------------........C...............  35

                                                   
                                       T  V  S  S  
                    Query_10542  362  ACCGTCTCCTCAG  374
J  97.3% (36/37)    IGHJ4*02     36   .............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_80076

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           367     6e-104
IGHD3-16*01                                                                                           12.2    35    
IGHJ6*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCC	TTGGGG	CGGC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCTTGGGGCGGCCTACGGTTTGGACGTC	ARPLGAAYGLDV	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	262	27	0	90.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  D  S  L  T  I  S  C  Q  V  S  G  Y  I  F  T  H  Y
                    Query_10543  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCGGGGGACTCTCTGACGATCTCCTGTCAGGTTTCTGGATACATCTTCACCCACTA  90
V  90.7% (262/289)  IGHV5-51*03  6    ...............................A..........G.......A..........A...G...........G...T...AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  V  A  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_10543  91   TTGGATCGCCTGGGTGCGCCAGGTGGCCGGCAAAGGCCTAGAGTGGATGGGGGTCATCTATCCTGGCGACTCTGATGCCAGATACAGCCC  180
V  90.7% (262/289)  IGHV5-51*03  96   C.......G.............A..C....G........G............A.............T.........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  L  V  T  I  S  V  D  K  S  L  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_10543  181  GTCCTTTCAAGGCCTGGTCACCATCTCAGTCGACAAGTCCCTCAGTACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  90.7% (262/289)  IGHV5-51*03  186  ......C.......A..............C..........A....C....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  F  C  A  R  P  L  G  A  A  Y  G  L  D  V  W  G  Q  G  T  A  V  V  V  S  S 
                    Query_10543  271  CATTTACTTCTGTGCGAGACCCCTTGGGGCGGCCTACGGTTTGGACGTCTGGGGCCAAGGGACCGCGGTCGTCGTCTCGTCA  352
V  90.7% (262/289)  IGHV5-51*03  276  ...G..T.A..........---------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                
D  100.0% (6/6)     IGHD3-16*01  16   -----------------------......-----------------------------------------------------  21
J  89.8% (44/49)    IGHJ6*02     14   ---------------------------------.......A.......................A.....AC......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_73652

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           321     6e-90
IGHD2-8*02                                                                                            16.1    2.1  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD2-8*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAC	TACTGGCGGTG	AA	GATAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTACTACTGGCGGTGAAGATATC	ARSTTGGEDI	237	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	20	4	0	83.3
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	242	6	6	0	0	100
Total	N/A	N/A	231	218	13	0	94.4


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  D  F  Y  M  T  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  F  I 
                    Query_10544  12   TGTGCAGCCTCTGGATTCACCTTCAGTGACTTCTACATGACCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAATGGGTTTCATTCATT  101
V  94.4% (218/231)  IGHV3-11*06  64   ...............................A........G.................................G..........A....  153
                                       C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  R  S  G  H  S  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  R  N  S  L  F  L 
                    Query_10544  102  AGTAGTAGAAGTGGTCACTCAAACTACGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCAGGAACTCACTGTTTTTG  191
V  94.4% (218/231)  IGHV3-11*06  154  ........T...A..T..A...................................A..................A...........A.C..  243
                                       S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------CDR3-IMGT--------->               
                                       Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  S  T  T  G  G  E  D  I  W  G  Q  G  T 
                    Query_10544  192  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAAGTACTACTGGCGGTGAAGATATCTGGGGCCAAGGGACA  281
V  94.4% (218/231)  IGHV3-11*06  244  .................................G.................---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  90.9% (10/11)    IGHD2-8*02   10   --------------------------------------------------------......T....-----------------------  20
J  100.0% (38/38)   IGHJ3*02     11   ---------------------------------------------------------------------.....................  31

                                                       
                                       M  V  T  V  S  S
                    Query_10544  282  ATGGTCACCGTCTCTTC  298
J  100.0% (38/38)   IGHJ3*02     32   .................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_334142

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           282     4e-78
IGHD3-16*01                                                                                           18.0    0.61 
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACAACG	TATGCTTAT	GTCAGTGCTTGGGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAACGTATGCTTATGTCAGTGCTTGGGGATGATGCTTTTGATGTC	ARRQRMLMSVLGDDAFDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  V  T  T  T  R  Y  S  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_10545  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCGTCACCACTACTAGATACTCCTGGGGTTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  86.0% (215/250)  IGHV4-39*01  49   ...............................G....A...G..G..G...T....A......C..........................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Q  M  F  Y  G  G  S  T  Y  Q  N  P  S  L  N  S  R  V  T  V  S  V  D  P  S 
                    Query_10545  91   CTGGAATGGATTGGGCAGATGTTCTATGGTGGGAGCACGTACCAGAACCCGTCGCTGAATAGTCGAGTCACCGTGTCCGTTGACCCGTCC  180
V  86.0% (215/250)  IGHV4-39*01  139  .....G.........AGT..C.AT...A..........C...T.C........C..C..G............A.A.....A...A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  S  Q  F  F  L  N  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  R  Q  R  M  L  M  S 
                    Query_10545  181  AAGAGTCAGTTCTTCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCTGTATATTATTGTGCGAGACGACAACGTATGCTTATGTCA  270
V  86.0% (215/250)  IGHV4-39*01  229  ....AC.......C......G....G...................A.......G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  26   -----------------------------------------------------------------------------.........----  34

                                      -IMGT--------------------->                                  
                                       V  L  G  D  D  A  F  D  V  W  G  Q  G  T  G  V  T  V  S  S  
                    Query_10545  271  GTGCTTGGGGATGATGCTTTTGATGTCTGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  331
J  96.0% (48/50)    IGHJ3*01     1    -----------...............................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_192446

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_10546  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_10546  91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y 
                    Query_10546  181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTAC  270
V  91.4% (223/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD2-2*01   8    ---------------------------------------------------------------------........T........----  24
J  86.5% (45/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  G  I  V  S  S 
                    Query_10546  271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGGCATCGTCTCCTCA  318
J  86.5% (45/52)    IGHJ6*02     15   ...GGT................A........C..T..C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_192445

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           335     4e-94
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
Total	N/A	N/A	242	228	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10547  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.2% (228/242)  IGHV3-33*03  47   .....................................C..C.....C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  F  R  D  D  S  
                    Query_10547  91   AGTGGGTGGCAGTTATATGGTATGATGGAATTAAGAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTTCAGAGACGACTCCA  180
V  94.2% (228/242)  IGHV3-33*03  137  ..............................G...T........................................C.......A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_10547  181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCG  270
V  94.2% (228/242)  IGHV3-33*03  227  .......G....A......A..............................G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  90.9% (10/11)    IGHD6-13*01  7    -------------------------------------------------------------------....G......------------  17
J  97.8% (45/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_10547  271  ACCCCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  309
J  97.8% (45/46)    IGHJ5*02     13   .....................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_192444

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           336     1e-94
IGHD1-7*01                                                                                            12.2    32   
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGCGAGGA	TGGAAGTAC	GACGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGCGAGGATGGAAGTACGACGGCTACTTCTACGGTATGGACGTC	ARDPRGWKYDGYFYGMDV	232	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	117	21	14	1	6	66.7
FR3-IMGT	118	231	114	109	5	0	95.6
CDR3-IMGT (germline)	232	239	8	8	0	0	100
Total	N/A	N/A	245	232	7	6	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10548  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCAATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (232/245)  IGHV4-59*01  49   ...................................C......................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S        W  S  T  N  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_10548  91   TGGATTGGGTATATCTCTT------GGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCAGCATTTCAGTAGACACGTCCAAGAAT  174
V  94.7% (232/245)  IGHV4-59*01  139  ................A..ACAGTG.......................................C...A....................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  R  G  W  K  Y  D  G 
                    Query_10548  175  CAGTTCTCCCTGAAGCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCCGCGAGGATGGAAGTACGACGGC  264
V  94.7% (232/245)  IGHV4-59*01  229  .................G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (8/9)      IGHD1-7*01   9    ---------------------------------------------------------------------------.....C...------  17
J  98.2% (54/55)    IGHJ6*02     8    -----------------------------------------------------------------------------------------.  8

                                      -------------------->                                 
                                       Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10548  265  TACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  98.2% (54/55)    IGHJ6*02     9    ....A.................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_192443

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            333     1e-93
IGHD3-3*01                                                                                            14.1    8.0  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  V  G  S  I  T  S  A  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10549  1    ACCCTGTCCCTCACCTGCGATGTCTCTGTTGGCTCCATCACCAGTGCTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGCCTG  90
V  93.5% (229/245)  IGHV4-4*02   49   ...................C........G...........G....AG.......................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_10549  91   GAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAG  180
V  93.5% (229/245)  IGHV4-4*02   139  ..G.........G.A......C.T............A............................C................A...C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  D 
                    Query_10549  181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCGAC  270
V  93.5% (229/245)  IGHV4-4*02   229  ................................C................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-3*01   15   ------------------------------------------------------------------.......-----------------  21
J  100.0% (51/51)   IGHJ5*02     1    ----------------------------------------------------------------------------..............  14

                                      -->                                  
                                       P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10549  271  CCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (51/51)   IGHJ5*02     15   .....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_192441

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           402     3e-114
IGHD2-21*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	ATTTTGGTGG	ATAGAGATAGAGTTCC	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGCCGTC	ARGGFWWIEIEFRMAV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  Y 
                    Query_10550  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACCGACTAT  91
V  94.5% (273/289)  IGHV1-18*01  7    .............................................................................C......AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  W  I  S  A  Y  T  G  N  T  K  N  A  Q 
                    Query_10550  92   GGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGATGGATCAGCGCTTACACTGGTAATACAAAAAATGCACAA  181
V  94.5% (273/289)  IGHV1-18*01  97   .......G.....................................A.....................A......C.....CT.......G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  V  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10550  182  AGAGTCCAGGGCAGAGTGACCATGACCACAGACACATCCACGAGAACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.5% (273/289)  IGHV1-18*01  187  .AGC.............C..........................C...............C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  G  G  F  W  W  I  E  I  E  F  R  M  A  V  W  G  Q  G  T  T  V  S  V  S 
                    Query_10550  272  GTGTATTACTGTGCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGCCGTCTGGGGCCAAGGGACCACGGTCTCCGTCTCC  361
V  94.5% (273/289)  IGHV1-18*01  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD2-21*01  6    -----------------------...G......---------------------------------------------------------  15
J  95.5% (42/44)    IGHJ6*02     19   -------------------------------------------------......A.........................A........  59

                                         
                                       S 
                    Query_10550  362  TCA  364
J  95.5% (42/44)    IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_192440

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           313     1e-87
IGHD3-10*01                                                                                           10.3    116  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGA	CTTCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGACTTCAGGCCTTTGACTCC	ARGGLQAFDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  G  G  F  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_10551  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAACAGTGGTGGATTCTACTGGACTTGGATCCGCCAACACCCAGGGAAGGGC  90
V  90.0% (225/250)  IGHV4-31*03  49   .......................C................G.........T.A........GC...........G...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  Y  T  G  H  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  L  D  T  S 
                    Query_10551  91   CTAGAGTGGATTGGTTACATCTTTTACACTGGACACACCTACTACAATCCGTCCCTCAGGAGTCGACTTACCATTTCACTGGACACATCT  180
V  90.0% (225/250)  IGHV4-31*03  139  ..G...........G.......A.....G...GAG............C..........A.......G.......A...G.A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       E  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  L  Q  A  F  D 
                    Query_10551  181  GAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGGGGACTTCAGGCCTTTGAC  270
V  90.0% (225/250)  IGHV4-31*03  229  A...................G.....C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------.....---------------  20
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10551  271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.7% (43/44)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_80073

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           321     7e-90
IGHD3-16*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCTGCGGACTGG	GATTACG	GTT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCTGCGGACTGGGATTACGGTTACTGGTTTGACCAC	AKAADWDYGYWFDH	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10552  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCGCCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.5% (226/247)  IGHV3-23*01  47   ............................................AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  G  S  H  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10552  91   AGTGGGTCTCAGGTATTAGTGGTGGTTCTCATAATACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.5% (226/247)  IGHV3-23*01  137  ............C..........A..GG.GG..GC.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  L  R  M  N  N  L  R  A  E  D  A  A  L  Y  Y  C  A  K  A  A  D  W  D  Y  G  
                    Query_10552  181  AGAACACGCTCTCTCTGCGCATGAACAATCTCAGAGCCGAGGACGCGGCCCTATACTACTGTGCGAAGGCTGCGGACTGGGATTACGGTT  270
V  91.5% (226/247)  IGHV3-23*01  227  ..........G.A.....AA.......GC..G............A.....G....T...........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  8    --------------------------------------------------------------------------------.......---  14

                                      ------------->                                  
                                      Y  W  F  D  H  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10552  271  ACTGGTTTGACCACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  93.8% (45/48)    IGHJ5*02     4    .......C....C..............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_192449

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-24*01                                                                                           403     1e-114
IGHD6-19*01                                                                                           18.0    0.64  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-24*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCAA	AAATG	GGCTGGTAC	GCTAGAC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAATGGGCTGGTACGCTAGACACTTTGACAAC	AKMGWYARHFDN	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	286	272	14	0	95.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  V  S  G  Y  T  L  S  E  L 
                    Query_10553  2    CAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGTTTCCGGATACACCCTCAGTGAATTA  91
V  95.1% (272/286)  IGHV1-24*01  7    ........A........................................A................................C.......  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T  E  L 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  I  Y  A  Q 
                    Query_10553  92   TCCATACACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCCTGAAGACGGTGAAACAATCTACGCTCAG  181
V  95.1% (272/286)  IGHV1-24*01  97   .....G..............................................................T.................A...  186
                                       S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  I  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  K  G  R  V  T  M  T  D  D  T  S  T  D  A  A  Y  M  E  L  S  S  L  R  S  D  D  T  A 
                    Query_10553  182  AAGTTCAAGGGCAGAGTCACCATGACCGACGACACGTCTACAGACGCAGCCTACATGGAACTGAGCAGCCTGAGATCTGACGACACGGCC  271
V  95.1% (272/286)  IGHV1-24*01  187  ......C......................G.....A.........A.............G....................G.........  276
                                       K  F  Q  G  R  V  T  M  T  E  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  F  C  A  K  M  G  W  Y  A  R  H  F  D  N  W  S  Q  G  T  L  V  T  V  S  S  
                    Query_10553  272  GTTTATTTCTGTGCAAAAATGGGCTGGTACGCTAGACACTTTGACAACTGGAGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.1% (272/286)  IGHV1-24*01  277  ..G....A........------------------------------------------------------------------  292
                                       V  Y  Y  C  A                                                                    
D  100.0% (9/9)     IGHD6-19*01  13   ---------------------.........----------------------------------------------------  21
J  95.6% (43/45)    IGHJ4*02     4    -------------------------------------........T.....G..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_192448

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	280	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  
                    Query_10554  2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGAGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCCA  91
V  94.9% (280/295)  IGHV5-51*01  2    ....G.....G................................G..........................................A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  
                    Query_10554  92   CTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACA  181
V  94.9% (280/295)  IGHV5-51*01  92   GC..C.......G.................................................T.................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  
                    Query_10554  182  ACCCGTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACA  271
V  94.9% (280/295)  IGHV5-51*01  182  G..........C.....................C...........................................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  
                    Query_10554  272  CCGCCATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  361
V  94.9% (280/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  85.7% (12/14)    IGHD1-26*01  4    ---------------------------------...G....A.....-------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------------......TA................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_10554  362  CGGTCACCGTCTCGTCA  378
J  94.7% (54/57)    IGHJ6*02     46   .............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_229896

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHD6-13*01                                                                                           12.2    32   
IGHJ5*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCGCCGACG	GCAGCA	CCACCTTCTTCTTCCCCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCGCCGACGGCAGCACCACCTTCTTCTTCCCCGACTGGTTCGACCCC	ARTADGSTTFFFPDWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	224	18	0	92.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  I  S  G  G  S  I  N  K  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_10555  4    CCCTGAGACTCTCCTGTACTATCTCTGGTGGCTCCATCAATAAATACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAGT  93
V  92.6% (224/242)  IGHV4-59*01  50   .....TCC...A....C...G..................G..GT...........C.............................G....  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  R  S  K  N  
                    Query_10555  94   GGATAGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACAGGTCCAAGAACC  183
V  92.6% (224/242)  IGHV4-59*01  140  ....T..G...............................................................G......C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  V  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  A  D  G  S  T  T  F  F  
                    Query_10555  184  AGGTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAACCGCCGACGGCAGCACCACCTTCTTCT  273
V  92.6% (224/242)  IGHV4-59*01  230  ..T.........A.................................G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD6-13*01  8    ------------------------------------------------------------------------......------------  13

                                      ------------------->                                  
                                      F  P  D  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10555  274  TCCCCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (48/48)   IGHJ5*02     4    ------................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_237703

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            363     1e-102
IGHD1-26*01                                                                                           18.0    0.56  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	AGCA	AGTGGGAGC	CTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAAGCAAGTGGGAGCCTTATGACTCC	ARSKWEPYDS	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10556  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (240/248)  IGHV3-7*01   47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  Y  E  K  Y  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_10556  91   AGTGGGTGGCCAACATAAAGGAAGATGGATATGAGAAATACTATGTGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (240/248)  IGHV3-7*01   137  ....................C........AG..........................A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  I  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  S  K  W  E  P  Y  D  
                    Query_10556  181  AGAACTCACTGTATCTGCAAATCAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCAAGAAGCAAGTGGGAGCCTTATGACT  270
V  96.8% (240/248)  IGHV3-7*01   227  ......................G.............C...........................G...----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD1-26*01  6    ------------------------------------------------------------------------.........---------  14
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10556  271  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_80071

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           380     1e-107
IGHD1-1*01                                                                                            18.0    0.65  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCTT	TACAACTGG	GTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCTTTACAACTGGGTTTTTGACTTC	ARGLYNWVFDF	291	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	17	7	0	70.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	18	6	0	75
FR3-IMGT	177	290	114	105	9	0	92.1
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	269	26	0	91.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  D  T  F  T 
                    Query_10557  3    CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCGGGGTCCTCGGTGAGGGTCTCCTGCAAGGCTTCTGGAGACACCTTCACT  92
V  91.2% (269/295)  IGHV1-69*01  1    .........................................T.............A.......................G........GC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  S  I  S  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  G  I  I  P  R  F  G  T  K  N  Y 
                    Query_10557  93   AGTTACAGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGAGGCATCATCCCCAGGTTTGGTACAAAGAATTAC  182
V  91.2% (269/295)  IGHV1-69*01  91   ..C..TGC...................................T...............G........T.TC.........GCA..C...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  G  P  T  S  T  V  Y  M  D  L  S  S  L  T  S  E  D 
                    Query_10557  183  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGGACCCACGAGCACAGTCTACATGGACCTGAGCAGCCTGACATCTGAGGAC  272
V  91.2% (269/295)  IGHV1-69*01  181  ........................................A.T............C.........G.............G..........  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------CDR3-IMGT----------->                                 
                                       T  A  T  Y  Y  C  A  R  G  L  Y  N  W  V  F  D  F  W  G  Q  G  S  L  V  T  V  S  S 
                    Query_10557  273  ACGGCCACATATTACTGTGCGAGAGGGCTTTACAACTGGGTTTTTGACTTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCA  356
V  91.2% (269/295)  IGHV1-69*01  271  ......GTG................-----------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                             
D  100.0% (9/9)     IGHD1-1*01   3    ------------------------------.........---------------------------------------------  11
J  95.2% (40/42)    IGHJ4*02     6    ------------------------------------------.......A.............A....................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_229891

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           333     1e-93
IGHD3-9*01                                                                                            39.1    3e-07
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGACCTAC	TACGTTATTTTGACTGGTTATTA	ACAGGTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGACCTACTACGTTATTTTGACTGGTTATTAACAGGTTATGACTTC	ARGDLLRYFDWLLTGYDF	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  T  F  T  G  Y  F  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10558  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGACCTTTACTGGTTATTTCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAG  90
V  93.5% (229/245)  IGHV4-34*01  49   .................................T....C.G......C.A.....G...........................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  T  N  Y  S  P  S  L  K  S  R  V  T  L  S  V  D  T  S  K  N 
                    Query_10558  91   TGGATTGGGGAAATCAGTCATAGTGGATCCACCAACTACAGCCCGTCCCTCAAGAGTCGAGTCACCCTGTCAGTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-34*01  139  ................A..........AG...........A.........................A.A.....................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  I  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  L  L  R  Y  F  D  W 
                    Query_10558  181  CAAATCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCGACCTACTACGTTATTTTGACTGG  270
V  93.5% (229/245)  IGHV4-34*01  229  ..GT...............G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  95.7% (22/23)    IGHD3-9*01   5    -------------------------------------------------------------------------....A............  21

                                      -------------------->                                  
                                       L  L  T  G  Y  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_10558  271  TTATTAACAGGTTATGACTTCTGGGGCCAGGGAACTCTGGTCGCCGTCTCCTCAG  325
D  95.7% (22/23)    IGHD3-9*01   22   ......-------------------------------------------------  27
J  92.7% (38/41)    IGHJ4*02     8    --------------.....A...............C......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_237707

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           300     9e-84
IGHD2-8*02                                                                                            18.0    0.61 
IGHJ5*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATTGTCGGTGTTGGC	TATTGCACTGGT	AGCAGTTGTTCCCCTCCGTCTGCCG	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGTCGGTGTTGGCTATTGCACTGGTAGCAGTTGTTCCCCTCCGTCTGCCGCC	ARIVGVGYCTGSSCSPPSAA	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	217	25	0	89.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  G  S  F  S  Y  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E  
                    Query_10559  4    CCCTGAGACTCTCCTGCTCTGTCTCTGGTGGGTCCTTCAGTTATTACTACTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTGGAGT  93
V  89.7% (217/242)  IGHV4-34*01  50   .....TCC...A.....G......A................GG............C...A.............A................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  D  I  N  Q  S  G  G  T  N  Y  S  P  S  L  E  S  R  V  T  I  S  I  D  T  S  K  N  
                    Query_10559  94   GGATTGGTGACATCAATCAAAGTGGAGGCACCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCATATCAATAGACACGTCGAAGAACC  183
V  89.7% (217/242)  IGHV4-34*01  140  .......G..A........T......A............A..........A....................G..........C.......  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      Q  F  S  L  K  L  K  S  L  A  A  A  D  T  A  V  Y  F  C  A  R  I  V  G  V  G  Y  C  T  G  
                    Query_10559  184  AGTTCTCCCTGAAGCTGAAGTCTTTGGCCGCCGCGGACACGGCTGTCTATTTCTGTGCGAGAATTGTCGGTGTTGGCTATTGCACTGGTA  273
V  89.7% (217/242)  IGHV4-34*01  230  ..................GC...G..A...................G....A..........----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  91.7% (11/12)    IGHD2-8*02   5    -----------------------------------------------------------------------------.....T......-  16

                                      T------------------------>                                
                                      S  S  C  S  P  P  S  A  A  W  G  Q  G  T  L  V  T  V  S  S
                    Query_10559  274  GCAGTTGTTCCCCTCCGTCTGCCGCCTGGGGCCAGGGAACTCTGGTCACCGTCTCCTC  331
J  97.1% (33/34)    IGHJ5*02     16   ------------------------................C.................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_237708

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           336     1e-94
IGHD6-13*01                                                                                           12.2    32   
IGHJ5*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCGCCGACG	GCAGCA	CCACCTTCTTCTTCCCCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCGCCGACGGCAGCACCACCTTCTTCTTCCCCGACTGGTTCGACCCC	ARTADGSTTFFFPDWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  I  S  G  G  S  I  N  K  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10560  1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGGCTCCATCAATAAATACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAG  90
V  94.2% (229/243)  IGHV4-59*01  49   .....................G..................G..GT...........C.............................G...  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  R  S  K  N 
                    Query_10560  91   TGGATAGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACAGGTCCAAGAAC  180
V  94.2% (229/243)  IGHV4-59*01  139  .....T..G...............................................................G......C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       *  V  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  A  D  G  S  T  T  F  F 
                    Query_10560  181  TAGGTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAACCGCCGACGGCAGCACCACCTTCTTC  270
V  94.2% (229/243)  IGHV4-59*01  229  C..T.........A.................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-13*01  8    -------------------------------------------------------------------------......-----------  13

                                      -------------------->                                  
                                       F  P  D  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10560  271  TTCCCCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ5*02     4    -------................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_114600

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD3-3*01                                                                                            18.0    0.59 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGCCTCGTGCCTG	GGAGTGGTT	TTGAGGCTATTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGCCTCGTGCCTGGGAGTGGTTTTGAGGCTATTCCTGACTAC	AKSLVPGSGFEAIPDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10561  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTTAGTAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-23*01  47   ............................T..............C.............G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  G  I  T  G  S  G  D  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10561  91   AGTGGCTCTCAGGTATTACTGGCAGTGGTGATAACACCTACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (236/248)  IGHV3-23*01  137  .....G......C.....G...T.......G..G...A....................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  S  L  V  P  G  S  G  
                    Query_10561  181  AGAACACGCTGTATCTGCAAATAAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAAAAGCCTCGTGCCTGGGAGTGGTT  270
V  95.2% (236/248)  IGHV3-23*01  227  ......................G.............................A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD3-3*01   15   ---------------------------------------------------------------------------------.........  23

                                      T------------------>                                  
                                      F  E  A  I  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10561  271  TTGAGGCTATTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (41/41)   IGHJ4*02     8    -------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_229898

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD1-26*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTGTTTTC	TGGGACCTACTAC	CTTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTAC	ARVFSGTYYLLDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  T  A  F  G  Y  S  F  T  S  Y
                    Query_10562  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTACGGCTTTTGGATACAGCTTTACCAGTTA  90
V  95.8% (277/289)  IGHV5-51*03  6    ..............................................................A..G..C..................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  R  D  G  E  T  R  Y  S  P
                    Query_10562  91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTCGTGACGGTGAAACCAGATACAGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   C...............................................................G.....TC...T..............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_10562  181  GTCCTTCCAAGGCCAGGTCAGCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  ....................C....................................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                
                                        M  Y  Y  C  A  R  V  F  S  G  T  Y  Y  L  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_10562  271  CATGTATTATTGTGCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  354
V  95.8% (277/289)  IGHV5-51*03  276  .........C.........-----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                  
D  92.3% (12/13)    IGHD1-26*01  8    ---------------------------.....G.......--------------------------------------------  20
J  100.0% (40/40)   IGHJ4*02     7    --------------------------------------------........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_83289

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           360     1e-101
IGHD5-12*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGGGAAGG	GGATCTAGTGCCGACGATT	T	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGGGAAGGGGATCTAGTGCCGACGATTTCTTTGACCTC	AREGGRGSSADDFFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10563  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-21*01  47   ...................................................G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  L  S  S  S  G  S  Y  I  Y  C  A  D  S  V  K  G  R  F  T  I  S  R  D  N  F  
                    Query_10563  91   AGTGGGTCTCATCGCTTAGTAGTAGTGGTAGTTACATTTACTGCGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACTTCA  180
V  96.0% (240/250)  IGHV3-21*01  137  .............CA...........A..........A....A...........................................GC..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  G  G  R  G  S  S  
                    Query_10563  181  AGAATTCACTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGGGGGGAAGGGGATCTAGTG  270
V  96.0% (240/250)  IGHV3-21*01  227  ....C.......A.........................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.2% (16/19)    IGHD5-12*01  3    --------------------------------------------------------------------------------....A.....  12

                                      T------------------>                                  
                                      A  D  D  F  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10563  271  CCGACGATTTCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  84.2% (16/19)    IGHD5-12*01  13   G.T......---------------------------------------------  21
J  95.5% (42/44)    IGHJ4*02     5    ----------.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_83288

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*04                                                                                           386     2e-109
IGHD1-26*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*04	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGGGTCCT	TATAGTGGGAGC	CCGCAAGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACTTC	AKPGPYSGSPQGYFDF	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	69	5	0	93.2
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	16	8	0	66.7
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	270	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  G  A  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  
                    Query_10564  3    AGGTGCAGCTGGTGCAGTCTGGAGGAGCCTTAGTGCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCA  92
V  92.2% (270/293)  IGHV3-23*04  2    ..............G.......G....G...G..A.......................................................  91
                                         V  Q  L  V  E  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I  T  E  T  G  R  N  S  Y  Y  
                    Query_10564  93   CCTTCGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAACTATTACTGAGACTGGTCGTAATTCATACTACG  182
V  92.2% (270/293)  IGHV3-23*04  92   G..AT........C..........................................G......G..GT.G....G...GCA.........  181
                                      S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  K  N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  
                    Query_10564  183  CAGACTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCAAGAACACACTGTATCTGCAAATGAACACCCTGAGAGCCGAGGACA  272
V  92.2% (270/293)  IGHV3-23*04  182  ...................G....C...............T...........G...................G.................  271
                                      A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      T  A  V  Y  Y  C  A  K  P  G  P  Y  S  G  S  P  Q  G  Y  F  D  F  W  G  Q  G  T  L  V  T  
                    Query_10564  273  CGGCCGTATATTACTGTGCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCG  362
V  92.2% (270/293)  IGHV3-23*04  272  .......................-------------------------------------------------------------------  294
                                      T  A  V  Y  Y  C  A  K                                                                    
D  100.0% (12/12)   IGHD1-26*01  3    --------------------------------............----------------------------------------------  14
J  97.8% (45/46)    IGHJ4*02     3    -----------------------------------------------------..........A..........................  39

                                               
                                      V  S  S  
                    Query_10564  363  TCTCCTCAG  371
J  97.8% (45/46)    IGHJ4*02     40   .........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_59069

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           327     9e-92
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAG	GTCGAGGGAG	TGACTACGGT	AGACT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGGTCGAGGGAGTGACTACGGTAGACTCTACTTTGACTAC	AKGRGSDYGRLYFDY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	101	51	44	4	3	86.3
CDR2-IMGT	102	125	24	19	5	0	79.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	249	231	15	3	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  I  S  W  V  R  R  A  P  G  K  G  L  
                    Query_10565  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATGCCATCAGCTGGGTCCGCCGGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-23*01  47   ...........................................C.G.........G.............A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S     M  I  G  G  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10565  91   AATGGATCTCA---ATGATTGGTGGTGGTGGAACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  177
V  92.8% (231/249)  IGHV3-23*01  137  .G...G.....GCT..T.G....A.......T.G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  G  R  G  S  D  Y  G  
                    Query_10565  178  AGAACACCCTGTATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCCAAAGGTCGAGGGAGTGACTACGGTA  267
V  92.8% (231/249)  IGHV3-23*01  227  .......G...............A..........................G.............G....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD4-17*01  1    -------------------------------------------------------------------------------..........-  10

                                      ---------------->                                  
                                      R  L  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10565  268  GACTCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (47/47)   IGHJ4*02     2    ----...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_91391

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           388     5e-110
IGHD6-13*01                                                                                           21.8    0.045 
IGHJ4*01                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAGTG	GCAGCAGCTGG	CT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGCAGCAGCTGGCTACTACTTTGACTCC	ARGVAAAGYYFDS	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	268	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  I  K  K  P  G  E  S  L  K  I  S  C  R  G  S  G  Y  R  F  T  N  F
                    Query_10566  1    GCAGCTGGTGCAGTCTGGAGCAGAAATAAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGGGTTCTGGATACAGGTTTACCAACTT  90
V  93.1% (268/288)  IGHV5-51*03  6    ........................GG.G..................................A...............C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  M  I  Y  P  R  D  S  E  T  R  Y  S  P
                    Query_10566  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATGATCTATCCTCGTGACTCTGAGACCAGATACAGCCC  180
V  93.1% (268/288)  IGHV5-51*03  96   ...................................................G..C.........G..........T..............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  N  S  M  N  T  A  H  L  Q  W  S  S  L  G  A  S  D  T  A
                    Query_10566  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAACTCCATGAACACCGCCCACCTGCAGTGGAGCAGTCTGGGGGCCTCGGACACCGC  270
V  93.1% (268/288)  IGHV5-51*03  186  ....................................G.....C.G.......T................C...AA...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        I  Y  H  C  A  R  G  V  A  A  A  G  Y  Y  F  D  S  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_10566  271  CATTTATCACTGTGCGAGGGGAGTGGCAGCAGCTGGCTACTACTTTGACTCCTGGGGCCAAGGTACCCTGGTCTCCGTCTCCTCAG  356
V  93.1% (268/288)  IGHV5-51*03  276  ...G...T..........--------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                       
D  100.0% (11/11)   IGHD6-13*01  8    -------------------------...........--------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*01     1    --------------------------------------............A............A.........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_83281

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           302     3e-84
IGHD3-10*02                                                                                           14.1    8.3  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	CTATGTT	AAGGGGCTCTGATAG	TTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTATGTTAAGGGGCTCTGATAGTTTTAATACT	ATMLRGSDSFNT	250	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	63	36	26	4	6	72.2
FR2-IMGT	64	114	51	49	2	0	96.1
CDR2-IMGT	115	135	21	18	3	0	85.7
FR3-IMGT	136	249	114	102	12	0	89.5
CDR3-IMGT (germline)	250	253	4	4	0	0	100
Total	N/A	N/A	253	225	22	6	88.9


Alignments

                                      <--------FR1-IMGT---------><-------------CDR1-IMGT------------><--------------------FR2-IM
                                       T  L  S  L  T  C  N  V  S  G  G  T  I  I  I  S  T  N  G  Y  Y  W  G  W  I  R  Q  P  P  G 
                    Query_10567  1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCACCATCATCATCAGTACAAATGGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGG  90
V  88.9% (225/253)  IGHV4-39*01  49   ...................C.............T......G..GT....------...................................  132
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S        S  Y  Y  W  G  W  I  R  Q  P  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  G  L  E  W  I  G  T  I  S  H  S  G  T  T  Y  Y  K  A  S  L  K  S  R  V  T  I  S  V  D 
                    Query_10567  91   AAGGGACTGGAGTGGATTGGGACTATCTCTCATAGTGGGACCACCTACTACAAGGCGTCCCTCAAGAGTCGAGTCACCATATCCGTCGAC  180
V  88.9% (225/253)  IGHV4-39*01  133  .....G................G.....A.T.........G............CC...............................A...  222
                                       K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-------------CDR3-IM
                                       T  S  K  N  Q  F  S  L  R  V  T  S  V  T  A  A  D  T  A  M  F  Y  C  A  T  M  L  R  G  S 
                    Query_10567  181  ACGTCGAAAAATCAGTTCTCCCTGAGGGTGACCTCTGTGACCGCCGCAGACACGGCTATGTTTTATTGTGCGACTATGTTAAGGGGCTCT  270
V  88.9% (225/253)  IGHV4-39*01  223  .....C..G..C.............A.C...G.........................G...A...C.......-----------------  295
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                   
D  100.0% (7/7)     IGHD3-10*02  7    -------------------------------------------------------------------------.......----------  13

                                      GT------------>                                  
                                       D  S  F  N  T  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10567  271  GATAGTTTTAATACTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  319
J  93.2% (41/44)    IGHJ3*02     7    -----....G...TC..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_83280

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           339     2e-95
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CATGCTTTCCTCGACTGATATGT	CGTTCGGGGGA	TTTTTGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACATGCTTTCCTCGACTGATATGTCGTTCGGGGGATTTTTGATTGACCAG	ARDMLSSTDMSFGGFLIDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	234	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  S  S  R  S  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_10568  1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGACTCCATCAGCAGTAGAAGTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGG  90
V  93.2% (234/251)  IGHV4-39*02  49   ...................C...........G...............T...........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  E  S  Q  V  A  I  S  I  D  T  S 
                    Query_10568  91   CTGGAATGGATTGGGAATATCTATTATAGTGGGAGCACCGACTACAACCCGTCCCTCGAGAGTCAAGTCGCCATATCGATAGACACGTCC  180
V  93.2% (234/251)  IGHV4-39*02  139  .....G..........G......................T.................A......G....A.......CG...........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  M  L  S  S  T  D 
                    Query_10568  181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACCGCCGCAGACACGGCTATTTATTACTGTGCGAGAGACATGCTTTCCTCGACTGAT  270
V  93.2% (234/251)  IGHV4-39*02  229  ........C............C....C........................G.G.................-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       M  S  F  G  G  F  L  I  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10568  271  ATGTCGTTCGGGGGATTTTTGATTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  90.9% (10/11)    IGHD3-16*01  13   ----....T......-------------------------------------------------  23
J  95.2% (40/42)    IGHJ4*02     7    ----------------------.....T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_59060

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           350     8e-99
IGHD4-17*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	ACGTAGGG	ACGGTGACTAC	GGGGCGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGAACGTAGGGACGGTGACTACGGGGCGGGCTTTGAGTAC	AGERRDGDYGAGFEY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10569  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTAAGTAGATATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-33*01  47   ........................................C.....C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  F  D  G  N  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  E  S  
                    Query_10569  91   AATGGGTGGCAGTTATCTGGTTTGATGGAAATAATAAATACTATGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACGAGTCCA  180
V  94.8% (237/250)  IGHV3-33*01  137  .G..............A....A........G.................................A..................A.T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  H  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  G  E  R  R  D  G  D  Y  
                    Query_10569  181  AGAACACGCTGCATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTCTATTACTGTGCGGGAGAACGTAGGGACGGTGACTACG  270
V  94.8% (237/250)  IGHV3-33*01  227  ...........T....................A...................G............A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD4-17*01  6    ------------------------------------------------------------------------------...........-  16

                                      ---------------->                                  
                                      G  A  G  F  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10569  271  GGGCGGGCTTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.7% (43/44)    IGHJ4*02     5    -------......C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_83282

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           353     1e-99
IGHD6-25*01                                                                                           12.2    35   
IGHJ3*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-25*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACT	CGGCTA	AGGTATCGC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTCGGCTAAGGTATCGCTTTGACATA	ATTRLRYRFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	286	256	30	0	89.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  P  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T  S  Y 
                    Query_10570  2    CAGCTGGTGCAGTCTGGACCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCATGTAAGGCTTCTGGATATATCTTCACCAGTTAT  91
V  89.5% (256/286)  IGHV1-18*01  7    ..................G.....................................C..C...........T..C.C...T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  T  P  G  E  G  L  E  W  M  G  W  I  S  T  Y  H  E  N  T  E  Y  S  Q 
                    Query_10570  92   GGCATTAGTTGGGTGCGACAGACCCCTGGAGAAGGGCTTGAGTGGATGGGATGGATCAGCACTTACCATGAAAACACAGAGTATTCACAG  181
V  89.5% (256/286)  IGHV1-18*01  97   ..T..C..C............G........C.............................G.....A...GT......A.C...G.....  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  I  T  A  D  T  S  T  S  T  A  Y  M  E  L  R  G  L  R  S  D  D  T  A 
                    Query_10570  182  AAGTTGCAGGGCAGAGTCACCATTACCGCAGACACATCCACGAGTACAGCCTACATGGAGTTGAGGGGCCTCAGATCTGACGACACGGCC  271
V  89.5% (256/286)  IGHV1-18*01  187  ...C.C.................G...A................C...............C.....A....G..................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       L  Y  F  C  A  T  T  R  L  R  Y  R  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10570  272  CTGTATTTCTGTGCGACGACTCGGCTAAGGTATCGCTTTGACATATGGGGCCAAGGGACAATGGTCACCGTCTCCTCAG  350
V  89.5% (256/286)  IGHV1-18*01  277  G......A........---------------------------------------------------------------  292
                                       V  Y  Y  C  A                                                                 
D  100.0% (6/6)     IGHD6-25*01  12   ---------------------......----------------------------------------------------  17
J  93.0% (40/43)    IGHJ3*02     8    ------------------------------------.....T..C.............................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_59066

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           410     1e-116
IGHD3-22*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATCGTGGTG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATCGTGGTGACTACTTTGACCAC	ARGLHYYDRGDYFDH	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_10571  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCAGGAGGCACCTTCAGCAGCTA  90
V  95.2% (276/290)  IGHV1-69*06  6    ..................G..................................................T....................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  V  P  V  L  R  T  A  N  Y  A  Q
                    Query_10571  91   TGTTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGGGGATCGTCCCTGTCCTTCGTACAGCGAACTACGCACA  180
V  95.2% (276/290)  IGHV1-69*06  96   ..C.....G..........................................A......A.....A..T..G.......A...........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  T  A  D  K  S  R  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_10571  181  GAAGTTCCAGGACAGAGTCACGATTACCGCGGACAAATCCAGGAGTACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.2% (276/290)  IGHV1-69*06  186  ...........G.............................C...C....C.......................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  G  L  H  Y  Y  D  R  G  D  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S
                    Query_10571  271  CGTGTATTACTGTGCGAGAGGCCTCCATTACTATGATCGTGGTGACTACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.2% (276/290)  IGHV1-69*06  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  88.9% (16/18)    IGHD3-22*01  3    --------------------------...........A..A...----------------------------------------------  20
J  97.9% (47/48)    IGHJ4*02     1    --------------------------------------------...........T..................................  46

                                        
                                        
                    Query_10571  361  AG  362
J  97.9% (47/48)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_83284

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           338     5e-95
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	230	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_10572  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.3% (230/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10572  91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCC  180
V  94.3% (230/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C.................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_10572  181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  94.3% (230/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10572  271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_59064

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD5-12*01                                                                                           14.1    8.7  
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGAGTCG	GTGGCTA	TT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGAGTCGGTGGCTATTACAACTGGTTCGACCCC	ARRVGGYYNWFDP	261	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	42	9	0	82.4
CDR2-IMGT	126	146	21	16	5	0	76.2
FR3-IMGT	147	260	114	100	14	0	87.7
CDR3-IMGT (germline)	261	266	6	6	0	0	100
Total	N/A	N/A	266	232	34	0	87.2


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  F  R  N  Y  Y  Y  N  W  I  R  
                    Query_10573  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACGTGCACGGTCTCTGGTGGCTCCTTCAGAAATTACTACTACAATTGGATTCGGC  90
V  87.2% (232/266)  IGHV4-59*01  26   ................T....................C.....T...............A....T.G........GG.GC.....C....  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  S  P  G  R  G  L  E  W  I  G  H  I  Y  F  T  G  G  T  K  Y  N  P  S  F  K  S  R  V  S  
                    Query_10573  91   AGTCCCCAGGGAGGGGACTGGAGTGGATTGGACATATTTATTTTACTGGGGGCACCAAGTATAACCCCTCCTTCAAAAGTCGAGTCTCCA  180
V  87.2% (232/266)  IGHV4-59*01  116  ..C.........A..................GT....C....AC.G....A.......C..C.........C....G.........A...  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  A  S  K  N  Q  F  S  L  T  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  
                    Query_10573  181  TCTCAGTGGACGCGTCGAAGAACCAGTTCTCCCTGACTCTAAACTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAAGAG  270
V  87.2% (232/266)  IGHV4-59*01  206  .A.....A...A....C...................AG..G.G...........................G...............----  291
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -----CDR3-IMGT-------------->                                  
                                      V  G  G  Y  Y  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  A  
                    Query_10573  271  TCGGTGGCTATTACAACTGGTTCGACCCCTGGGGCCAGGGAGCGCTGGTCACCGTCTCCGCAG  333
D  100.0% (7/7)     IGHD5-12*01  10   ---.......-----------------------------------------------------  16
J  94.1% (48/51)    IGHJ5*02     1    ------------.............................A.C...............T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_83286

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            333     1e-93
IGHD6-19*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	CCCGGC	GGTCTAGCAGTGGCTGGTAC	CCCCAATAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGCCCGGCGGTCTAGCAGTGGCTGGTACCCCCAATATTTTGACTTC	ATARRSSSGWYPQYFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  T  F  S  S  S  W  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10574  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTAGATTCACCTTCAGTTCTTCTTGGTTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-7*01   47   .............................G..........T...AGC.A....A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  V  N  V  K  H  D  G  T  E  K  F  Y  V  D  S  V  K  G  R  F  A  I  S  R  D  N  A  
                    Query_10574  91   AGTGGGTGGTCAACGTAAAGCATGATGGAACTGAGAAATTCTATGTGGACTCTGTGAAGGGCCGATTCGCCATCTCCAGAGACAACGCCA  180
V  92.8% (231/249)  IGHV3-7*01   137  .........C....A.......A.......G........A............................A.....................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  T  A  R  R  S  S  S  G  
                    Query_10574  181  AGAACTCACTCTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTTCTGTGCGACAGCCCGGCGGTCTAGCAGTGGCT  270
V  92.8% (231/249)  IGHV3-7*01   227  ..........G.........................C....................A........G..---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.0% (19/20)    IGHD6-19*01  2    ---------------------------------------------------------------------------...A...........  16

                                      GT-------------------->                                  
                                      W  Y  P  Q  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10574  271  GGTACCCCCAATATTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.0% (19/20)    IGHD6-19*01  17   .....----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_297597

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            341     5e-96
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCCACCCGAAAA	TATGACAGTAGTGATTATT	CCTCCCACCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCACCCGAAAATATGACAGTAGTGATTATTCCTCCCACCTCTTTGACTAC	STRKYDSSDYSSHLFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	108	6	0	94.7
Total	N/A	N/A	240	229	11	0	95.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  T  N  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_10575  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTACTAACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.4% (229/240)  IGHV4-4*02   49   ..............................................G...........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  R  G  G  S  P  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  K 
                    Query_10575  91   GAGTGGATTGGGGAAATCTATCGTGGTGGGAGCCCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCACTAGACAAGTCCAAA  180
V  95.4% (229/240)  IGHV4-4*02   139  ......................A.A........A.....................................A...G.............G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  S  T  R  K  Y  D  S  S  D  Y 
                    Query_10575  181  AACCAGTTCTCCCTGCGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTTCCACCCGAAAATATGACAGTAGTGATTAT  270
V  95.4% (229/240)  IGHV4-4*02   229  ...............AA.....G.....................................------------------------------  288
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  89.5% (17/19)    IGHD3-22*01  8    ------------------------------------------------------------------------.....T.......G....  25

                                      -------------------->                                  
                                       S  S  H  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10575  271  TCCTCCCACCTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  89.5% (17/19)    IGHD3-22*01  26   .------------------------------------------------------  26
J  100.0% (44/44)   IGHJ4*02     5    -----------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_297596

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           394     7e-112
IGHD3-10*01                                                                                           19.9    0.18  
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGTT	TTACTATGGCTCG	CCCGTAGT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGTTTTACTATGGCTCGCCCGTAGTCTGGTACTTCGACCTC	ARDRFYYGSPVVWYFDL	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	103	11	0	90.4
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	274	22	0	92.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  T  F  S 
                    Query_10576  1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAGC  90
V  92.6% (274/296)  IGHV1-69*01  1    ...G...................G.......................................................G..........  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  Q  I  V  P  V  F  G  T  T  T  Y 
                    Query_10576  91   GACTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACAGATCGTCCCTGTCTTTGGTACGACAACCTAC  180
V  92.6% (274/296)  IGHV1-69*01  91   AG.......................................................GG....A.....A..........AG...A....  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  E  D  L  Q  G  R  V  K  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_10576  181  GCAGAGGACTTACAGGGCAGAGTCAAAATCACCGCGGACGAATCCACTAGCACAGCCTACATGGAGCTGAGTAGCCTGAGATCTGAGGAC  270
V  92.6% (274/296)  IGHV1-69*01  181  ...C..A.G..C.............CG..T.................G.......................C..................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------------CDR3-IMGT-------------------->                     
                                       T  A  V  Y  Y  C  A  R  D  R  F  Y  Y  G  S  P  V  V  W  Y  F  D  L  W  G  R  G  T  L  V 
                    Query_10576  271  ACGGCCGTCTATTACTGTGCGAGAGATCGGTTTTACTATGGCTCGCCCGTAGTCTGGTACTTCGACCTCTGGGGCCGTGGCACCCTGGTC  360
V  92.6% (274/296)  IGHV1-69*01  271  ........G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  92.3% (12/13)    IGHD3-10*01  4    --------------------------------.........T...---------------------------------------------  16
J  98.0% (49/50)    IGHJ2*01     4    -----------------------------------------------------............T........................  40

                                                   
                                       T  V  S  S  
                    Query_10576  361  ACTGTCTCCTCAG  373
J  98.0% (49/50)    IGHJ2*01     41   .............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_297594

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           363     1e-102
IGHD3-3*01                                                                                            33.4    1e-05 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCCATCTTGGCGG	TTACGCTTTTTGGCGTGGTTATT	CCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCCATCTTGGCGGTTACGCTTTTTGGCGTGGTTATTCCCTTGACTAC	ARDPHLGGYAFWRGYSLDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10577  1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCCCCAGGCAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-33*01  47   ....................G........................G...........................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  H  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_10577  91   AGTGGGTGGCTGTTATATGGTATGATGGAAGTAATAAATACCATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCA  180
V  96.4% (241/250)  IGHV3-33*01  137  ..........A..............................T.............................A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  K  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  H  L  G  G  Y  
                    Query_10577  181  AGAAGACGTTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGAGATCCCCATCTTGGCGGTTACG  270
V  96.4% (241/250)  IGHV3-33*01  227  ....C...C.................................................C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.3% (21/23)    IGHD3-3*01   4    -------------------------------------------------------------------------------------.....  8

                                      -IMGT----------------------->                                  
                                      A  F  W  R  G  Y  S  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10577  271  CTTTTTGGCGTGGTTATTCCCTTGACTACTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  333
D  91.3% (21/23)    IGHD3-3*01   9    A.......A.........---------------------------------------------  26
J  97.6% (41/42)    IGHJ4*02     7    ---------------------............................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_297593

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           332     3e-93
IGHD1-26*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTCACCCT	TAGCGGGAACTACT	GCACTTCGCACGGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACTCACCCTTAGCGGGAACTACTGCACTTCGCACGGGGTACTTTGACTCC	AKDSPLAGTTALRTGYFDS	237	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	21	3	0	87.5
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	232	222	10	0	95.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  A  F  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_10578  13   GTGCAGCCTCTGGATTCGCCTTCAGTCGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATTT  102
V  95.7% (222/232)  IGHV3-30*18  65   .................A........A.............................................................A.  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  F  L  
                    Query_10578  103  GGTATGATGGAAGTAATAAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTTTCTGC  192
V  95.7% (222/232)  IGHV3-30*18  155  CA....................C.............................................................A.....  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------------CDR3-IMGT-------------
                                      Q  M  N  S  L  R  V  D  D  T  A  V  Y  H  C  A  K  D  S  P  L  A  G  T  T  A  L  R  T  G  
                    Query_10578  193  AAATGAACAGCCTGAGAGTTGATGACACGGCTGTGTATCACTGTGCGAAAGACTCACCCTTAGCGGGAACTACTGCACTTCGCACGGGGT  282
V  95.7% (222/232)  IGHV3-30*18  245  ..................C...G...............T.............--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  85.7% (12/14)    IGHD1-26*01  5    ------------------------------------------------------------...T....G.....----------------  18
J  97.8% (45/46)    IGHJ4*02     3    -----------------------------------------------------------------------------------------.  3

                                      ---------->                                  
                                      Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10578  283  ACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  97.8% (45/46)    IGHJ4*02     4    .........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_297591

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           285     4e-79
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GAAGTCCGGATC	TAGCAGTGG	TTGATG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTCCGGATCTAGCAGTGGTTGATGACTTTGACCTC	ARSPDLAVVDDFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  T  T  F  Q  S  N  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10579  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGAACCACCTTTCAAAGCAATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGTCTGG  90
V  87.0% (214/246)  IGHV3-23*01  47   ............................T...TT.......AGC...T.....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  S  A  S  G  A  N  I  Y  Y  A  A  S  L  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10579  91   AGTGGGTCGCTGGAATCAGCGCGAGTGGTGCAAACATATACTACGCAGCCTCCCTGAAGGGCCGCTTCACCATCTCCAGAGACAACTCGA  180
V  87.0% (214/246)  IGHV3-23*01  137  ........T.A.CT..T..T.GT.......GT.G..C...........A....G..........G....................T..C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      M  S  T  V  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  S  P  D  L  A  V  V  
                    Query_10579  181  TGAGCACGGTGTATCTGCAAATGAGCAGCCTGAGAGCCGAAGACACGGCCGTATATTTTTGTGCGAGAAGTCCGGATCTAGCAGTGGTTG  270
V  87.0% (214/246)  IGHV3-23*01  227  A..A....C...............A...............G................AC.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD6-19*01  6    ------------------------------------------------------------------------------.........---  14

                                      ------------->                                  
                                      D  D  F  D  L  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10579  271  ATGACTTTGACCTCTGGGGCCAGGGCGCCCTGGTCACCGTTTCCTCAG  318
J  88.9% (40/45)    IGHJ4*02     4    ---........TA............AA.............C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_297590

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_10580  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_10580  91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.2% (226/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_10580  181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.2% (226/245)  IGHV4-59*01  229  .............A......C..................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10580  271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_279760

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           307     1e-85
IGHD6-19*01                                                                                           18.0    0.60 
IGHJ2*01                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAA	CAGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAACAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQQWLPGDWYFDL	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	219	23	0	90.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  D  S  I  T  R  N  Y  W  S  W  I  R  Q  P  P  G  E  R  L  E  
                    Query_10581  4    CCCTGAGACTCTCCTGTAGTGTCTCTGGTGACTCCATCACTAGAAACTACTGGAGCTGGATCCGGCAGCCCCCAGGTGAGAGACTGGAGT  93
V  90.5% (219/242)  IGHV4-59*08  50   .....TCC...A....C.C...........G........G...TT...............................GA..G.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N  
                    Query_10581  94   GGATTGCATATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAACC  183
V  90.5% (219/242)  IGHV4-59*08  140  ......GG......T...........AG...........................................G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  F  L  P  A  V  Q  Q  W  L  
                    Query_10581  184  AGTTCTCCCTGAAGATGACTTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGATTCCTCCCCGCGGTGCAACAGTGGCTGC  273
V  90.5% (219/242)  IGHV4-59*08  230  ..............C...GC........................G.................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (9/9)     IGHD6-19*01  9    --------------------------------------------------------------------------------.........-  17

                                      ---------------------->                                  
                                      P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10581  274  CAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  330
J  100.0% (51/51)   IGHJ2*01     3    ------...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_279761

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           350     9e-99
IGHD2-2*01                                                                                            18.0    0.68 
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CC	ATTGTAGTA	AGACCGATTGTCATTTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCATTGTAGTAAGACCGATTGTCATTTTTACTTCTACTATAGTATGGACGTC	ASHCSKTDCHFYFYYSMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	95	19	0	83.3
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	256	32	0	88.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  G  T  F  S  N  F
                    Query_10582  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAACTT  90
V  88.9% (256/288)  IGHV1-69*01  6    ..................................................A...................................G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  L  F  G  T  T  N  Y  A  Q
                    Query_10582  91   TGGTATCAGTTGGGTGCGCCAGGCCCCGGGACAAGGACTTGAGTGGATGGGAGGGATCATCCCTCTGTTCGGAACAACAAACTACGCACA  180
V  88.9% (256/288)  IGHV1-69*01  96   ..C......C........A........T........G...........................A.C..T..T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  S  I  T  A  D  E  S  R  D  A  A  Y  L  E  L  S  R  R  K  P  E  D  T  A
                    Query_10582  181  GAAGTTCCAGGGCAGAGTCTCGATTACCGCGGACGAATCCAGGGACGCGGCCTATTTGGAGCTGAGTAGGCGAAAACCGGAAGACACGGC  270
V  88.9% (256/288)  IGHV1-69*01  186  ...................A.....................C.AG.A.A.....CA..........C..C.TG.G.T.T..G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        V  F  F  C  A  S  H  C  S  K  T  D  C  H  F  Y  F  Y  Y  S  M  D  V  W  G  Q  G  T  T  V
                    Query_10582  271  CGTGTTTTTTTGTGCGAGCCATTGTAGTAAGACCGATTGTCATTTTTACTTCTACTATAGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  88.9% (256/288)  IGHV1-69*01  276  .....A..AC........------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  100.0% (9/9)     IGHD2-2*01   6    --------------------.........-------------------------------------------------------------  14
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------....A......CG...............................  49

                                                   
                                        T  V  S  S 
                    Query_10582  361  CACCGTCTCCTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_279763

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     1e-124
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_10583  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  98.3% (284/289)  IGHV5-51*01  6    .............................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_10583  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_10583  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_10583  271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_10583  361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_279765

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           322     2e-90
IGHD2-15*01                                                                                           12.2    31   
IGHJ1*01                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCAGGTCGGG	GGTGGT	N/A	TTCCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCAGGTCGGGGGTGGTTTCCACCAC	AKDQVGGGFHH	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10584  1    GGTCCCTGAGACTCTCCTGTGAAGGCTCTGGATTCACCTTCCGAAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGC  90
V  91.2% (228/250)  IGHV3-30*18  47   .....................C..C................A.T.........................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  S  L  A  V  I  S  Y  D  G  S  N  K  F  Y  A  E  A  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10584  91   AGTCGCTGGCAGTTATTTCATATGATGGAAGTAACAAATTCTATGCAGAGGCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCGA  180
V  91.2% (228/250)  IGHV3-30*18  137  ...G.G..........A.................T....A.........CT.....................................C.  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      R  N  T  L  F  L  Q  I  N  S  V  R  P  E  D  T  A  V  Y  Y  C  A  K  D  Q  V  G  G  G  F  
                    Query_10584  181  GGAACACACTGTTTCTGCAAATCAACAGCGTGAGACCTGAAGACACGGCTGTCTATTACTGTGCGAAAGATCAGGTCGGGGGTGGTTTCC  270
V  91.2% (228/250)  IGHV3-30*18  227  A......G....A.........G......C.....G....G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-15*01  14   --------------------------------------------------------------------------------......----  19
J  93.0% (40/43)    IGHJ1*01     10   --------------------------------------------------------------------------------------....  13

                                      ---->                                  
                                      H  H  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_10584  271  ACCACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  309
J  93.0% (40/43)    IGHJ1*01     14   .G..............C..........C...........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_297599

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            417     6e-119
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	112	2	0	98.2
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	273	6	0	97.8


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_10585  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  97.8% (273/279)  IGHV6-1*01   26   ...........................................................G......G....AG.................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_10585  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  97.8% (273/279)  IGHV6-1*01   116  ..........................................................................................  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  *  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_10585  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGTAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  97.8% (273/279)  IGHV6-1*01   206  ..............A................................C..........................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------CDR3-IMGT--------->                                  
                                      C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10585  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  97.8% (273/279)  IGHV6-1*01   296  .........---------------------------------------------------------  304
                                      C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02     4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_297598

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           372     2e-105
IGHD1-20*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGAATACAA	GTATAAC	GGAATAGGG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGAATACAAGTATAACGGAATAGGGATGGACGTC	TRSEYKYNGIGMDV	287	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	69	5	0	93.2
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	172	21	19	2	0	90.5
FR3-IMGT	173	286	114	102	12	0	89.5
CDR3-IMGT (germline)	287	292	6	5	1	0	83.3
Total	N/A	N/A	290	264	26	0	91


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  E  S  
                    Query_10586  3    AGATGCAGCTGGTGCAGTCTGGAGGAGGCCTGATCCAGCCGGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCGGGGTTCACCGAAAGTA  92
V  91.0% (264/290)  IGHV3-53*01  2    ..G...........G..............T..........T................................T..........TC....  91
                                         V  Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  

                                      T------><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------
                                      R  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  T  T  H  Y  A  
                    Query_10586  93   GGAATTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGGAGTGGGTCTCAGTTATTTATAGTGGTGGTACCACACACTACGCAG  182
V  91.0% (264/290)  IGHV3-53*01  92   .C..C.......G...........................G..........................C.......G....T.........  181
                                      S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  M  T  T  L  F  L  Q  M  N  S  L  R  A  E  D  S  
                    Query_10586  183  ATTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCATGACCACATTGTTTCTTCAAATGAACAGTTTGAGAGCCGAGGACTCGG  272
V  91.0% (264/290)  IGHV3-53*01  182  .C..C...........A.........................A..A...GC...A...............CC..............A...  271
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                 
                                      A  V  Y  Y  C  T  R  S  E  Y  K  Y  N  G  I  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10586  273  CCGTGTATTACTGTACGAGATCAGAATACAAGTATAACGGAATAGGGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  361
V  91.0% (264/290)  IGHV3-53*01  272  ..............G.....---------------------------------------------------------------------  291
                                      A  V  Y  Y  C  A  R                                                                      
D  100.0% (7/7)     IGHD1-20*01  2    -------------------------------.......---------------------------------------------------  8
J  100.0% (42/42)   IGHJ6*02     21   -----------------------------------------------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_151341

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            353     1e-99
IGHD4-17*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AC	ACGGTGACTAC	CGATTC	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAACACGGTGACTACCGATTCTACTACTATTACTACGGACTGGACGTC	VREHGDYRFYYYYYGLDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  A  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10587  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTTAGTGCCTATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-7*03   47   ....................G.......................AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  N  E  K  H  Y  V  G  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10587  91   AATGGGTGGCCAACATAAAACAAGATGGAAATGAGAAACACTATGTGGGCTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-7*03   137  .G.................G..........G.......T.........A...............A.........................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  E  H  G  D  Y  R  F  
                    Query_10587  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGTGAGAGAACACGGTGACTACCGATTCT  270
V  95.2% (238/250)  IGHV3-7*03   227  ....................................................G..........C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD4-17*01  6    ------------------------------------------------------------------------...........-------  16
J  95.0% (57/60)    IGHJ6*02     3    -----------------------------------------------------------------------------------------.  3

                                      IMGT--------------------->                                 
                                      Y  Y  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10587  271  ACTACTATTACTACGGACTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  95.0% (57/60)    IGHJ6*02     4    .......C........TA.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_151340

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           313     2e-87
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAC	TGGAGGGGGCTTCGGGACAG	TATTATAAC	GGACGGCGGGGGAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACTGGAGGGGGCTTCGGGACAGTATTATAACGGACGGCGGGGGATTATGGACGTC	ATLEGASGQYYNGRRGIMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  S  N  T  Y  Y  W  A  W  V  R  Q  S  P  G  K  G 
                    Query_10588  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGAAGCAACACTTACTACTGGGCCTGGGTCCGCCAGTCCCCAGGGAAGGGG  90
V  90.0% (225/250)  IGHV4-39*01  49   ...............................G.........C..T.GT.G...........G....A........C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  A  I  H  Y  R  G  N  T  Y  Y  K  S  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_10588  91   CTGGAGTGGATTGGGGCTATCCATTATAGAGGGAACACCTACTACAAGTCGTCCCTCAAGAGTCGAGTCACCATGTCCGTGGACACGTCC  180
V  90.0% (225/250)  IGHV4-39*01  139  ...............AG....T.......T....G............CC.........................A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  N  L  G  S  V  T  V  A  D  T  S  V  Y  Y  C  A  T  L  E  G  A  S  G  Q 
                    Query_10588  181  AAGAACCAGTTCTCCCTGAACCTGGGGTCTGTGACCGTCGCAGACACGTCTGTGTATTATTGTGCGACACTGGAGGGGGCTTCGGGACAG  270
V  90.0% (225/250)  IGHV4-39*01  229  ....................G...A.C..........C..........G..........C.......G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      DR3-IMGT------------------------>                                 
                                       Y  Y  N  G  R  R  G  I  M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_10588  271  TATTATAACGGACGGCGGGGGATTATGGACGTCTGGGGCCAAGGGGCCACGGTCACCGTCTCCTCA  336
D  100.0% (9/9)     IGHD3-10*01  23   .........---------------------------------------------------------  31
J  97.7% (42/43)    IGHJ6*02     20   -----------------------......................A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_43445

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           330     1e-92
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACAAGGGGATAA	CTATAGTTAC	GAATCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACAAGGGGATAACTATAGTTACGAATCT	AQGDNYSYES	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	241	2	2	0	0	100
Total	N/A	N/A	241	226	15	0	93.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  I  S  W  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10589  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCATCAGTTGGAACTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.8% (226/241)  IGHV3-53*01  47   ......................................G.....A.C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  A  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  K  
                    Query_10589  91   AGTGGGTCTCAGTCATTTATGCCGGTGGTAGCACATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  93.8% (226/241)  IGHV3-53*01  137  .............T......AG...............C..C........................................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------CDR3-IMGT---------> 
                                      K  V  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  Q  G  D  N  Y  S  Y  E  S  
                    Query_10589  181  AAGTGTTGTATCTTCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCACAAGGGGATAACTATAGTTACGAATCTT  270
V  93.8% (226/241)  IGHV3-53*01  227  .CAC.C.............G.........................................-----------------------------  287
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  90.0% (9/10)     IGHD5-18*01  11   -------------------------------------------------------------------------....G.....-------  20
J  97.1% (33/34)    IGHJ4*02     15   -----------------------------------------------------------------------------------------.  15

                                                                       
                                      W  G  R  G  T  L  V  T  V  S  S  
                    Query_10589  271  GGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  303
J  97.1% (33/34)    IGHJ4*02     16   ......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_151342

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           296     2e-82
IGHD6-25*01                                                                                           12.2    30   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-25*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGGG	GCATCGGCT	GAGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGGGCATCGGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	230	262	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	20	4	0	83.3
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	106	8	0	93
Total	N/A	N/A	217	203	14	0	93.5


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_10590  13   GTCTGGATTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  93.5% (203/217)  IGHV3-33*03  72   ............C..C.....C.....C..............................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  I  K  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  F  L  Q  M  N
                    Query_10590  103  TGGAATTAAAAAATACTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCAAGAACACCCTGTTTCTGCAGATGAA  192
V  93.5% (203/217)  IGHV3-33*03  162  .....G...T..........C.....................................A.............G....A......A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------CDR3-IMGT----------->                    
                                        S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  D  P  W  G  Q  G  T  L  V
                    Query_10590  193  CAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGGGCATCGGCTGAGGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  282
V  93.5% (203/217)  IGHV3-33*03  252  .........................G.G.....C...-----------------------------------------------------  288
                                        S  L  R  A  E  D  T  A  V  Y  Y  C                                                      
D  88.9% (8/9)      IGHD6-25*01  8    -------------------------------------------...G.....--------------------------------------  16
J  100.0% (46/46)   IGHJ5*02     6    ----------------------------------------------------------................................  37

                                                    
                                        T  V  S  S  
                    Query_10590  283  CACCGTCTCCTCAG  296
J  100.0% (46/46)   IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_43443

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            352     3e-99
IGHD4-17*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGCAGCCTTA	GACTACGGTG	CTAAGAGGCTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCGCAGCCTTAGACTACGGTGCTAAGAGGCTTTTTGACTAC	VRGAALDYGAKRLFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10591  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTTTTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-7*03   47   ..............................................C.A.........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  A  G  S  E  E  S  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_10591  91   AGTGGGTGGCCAACATAAAGCAAGCTGGAAGTGAGGAGTCCTATGTGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (237/249)  IGHV3-7*03   137  ........................A..........A.A.A.................A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  V  R  G  A  A  L  D  Y  G  
                    Query_10591  181  AGAACTCACTGTATCTCCAAATGAACACCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGTGAGAGGCGCAGCCTTAGACTACGGTG  270
V  95.2% (237/249)  IGHV3-7*03   227  ................G..........G........................G..........C.....---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD4-17*01  2    --------------------------------------------------------------------------------..........  11

                                      T------------------>                                  
                                      A  K  R  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10591  271  CTAAGAGGCTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (43/43)   IGHJ4*02     6    -----------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_43442

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            361     4e-102
IGHD5-12*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTCTACTG	GTGCATATACTGGCTACGA	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGGTTCTACTGGTGCATATACTGGCTACGATGACTTC	GRGSTGAYTGYDDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10592  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  96.4% (240/249)  IGHV3-7*03   47   .............................................G...........................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  N  I  N  Q  D  G  S  K  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10592  91   AGTGGGTGGCCAACATAAACCAAGATGGAAGTAAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (240/249)  IGHV3-7*03   137  ...................G............G.........................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  L  Y  Y  C  G  R  G  S  T  G  A  Y  T  
                    Query_10592  181  AGAACTCACTATATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCCTTTATTACTGTGGGAGAGGTTCTACTGGTGCATATACTG  270
V  96.4% (240/249)  IGHV3-7*03   227  ..........G............A..........................G.G..........C.....---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  89.5% (17/19)    IGHD5-12*01  1    ------------------------------------------------------------------------------...G.....G..  12

                                      ------------->                                  
                                      G  Y  D  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10592  271  GCTACGATGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  89.5% (17/19)    IGHD5-12*01  13   .......-----------------------------------------  19
J  97.6% (40/41)    IGHJ4*02     8    -------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_151347

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           402     3e-114
IGHD3-22*01                                                                                           12.2    37    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACATTTCCTAAT	CTATGA	CAACAGAAATTACCGCCCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACATTTCCTAATCTATGACAACAGAAATTACCGCCCTCTTGACTAC	ARGHFLIYDNRNYRPLDY	291	344	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	103	11	0	90.4
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	276	19	0	93.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S 
                    Query_10593  3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACAGCTTTTCC  92
V  93.6% (276/295)  IGHV1-18*01  1    .....T.................................................................T..........C....A..  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  G  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 
                    Query_10593  93   CGTTATGGTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCAGCGCTTACAATGGTAACACAAACTAT  182
V  93.6% (276/295)  IGHV1-18*01  91   A.C......A..............................................A.................................  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  H  K  F  E  D  R  V  T  M  T  T  D  T  S  T  T  T  A  Y  M  E  L  R  S  L  T  S  D  D 
                    Query_10593  183  GCGCATAAATTCGAGGACAGAGTCACCATGACCACAGACACTTCCACGACCACAGCCTACATGGAACTGAGGAGCCTGACATCTGACGAC  272
V  93.6% (276/295)  IGHV1-18*01  181  ..A..G..GC..C...G........................A.......G...............G.............G..........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  R  G  H  F  L  I  Y  D  N  R  N  Y  R  P  L  D  Y  W  G  Q  G  T  L 
                    Query_10593  273  ACGGCCGTCTATTACTGTGCGAGAGGACATTTCCTAATCTATGACAACAGAAATTACCGCCCTCTTGACTACTGGGGCCAGGGAACCCTG  362
V  93.6% (276/295)  IGHV1-18*01  271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD3-22*01  7    --------------------------------------......----------------------------------------------  12
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------..........................  32

                                                      
                                       L  T  V  S  S  
                    Query_10593  363  CTCACCGTCTCCTCAG  378
J  97.6% (41/42)    IGHJ4*02     33   G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_43440

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10594  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_10594  91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_10594  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10594  271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_151349

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_10595  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_10595  91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  93.1% (228/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_10595  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACGCGGCCGTGTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  93.1% (228/245)  IGHV4-59*01  229  ...................G...................A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10595  271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_195149

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            315     5e-88
IGHD3-10*02                                                                                           14.1    9.0  
IGHJ3*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGCGA	CCGCGGTACGACCAGG	ATGTTCG	AGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGACCGCGGTACGACCAGGATGTTCGAGAATGCTCTTGAGATC	AGDRGTTRMFENALEI	264	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	77	27	22	5	0	81.5
FR2-IMGT	78	128	51	45	6	0	88.2
CDR2-IMGT	129	149	21	18	3	0	85.7
FR3-IMGT	150	263	114	98	16	0	86
CDR3-IMGT (germline)	264	271	8	6	2	0	75
Total	N/A	N/A	271	236	35	0	87.1


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  G  V  S  G  G  A  I  S  S  S  H  W  W  N  W  V  
                    Query_10596  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCGGTGTCTCTGGCGGCGCCATTAGCAGCAGTCACTGGTGGAATTGGGTCC  90
V  87.1% (236/271)  IGHV4-4*02   26   ................T....G....................C.........T...T....C.....T...A.........G........  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  A  P  G  K  G  L  E  W  I  G  Q  I  Y  P  G  G  S  A  N  Y  N  P  S  L  R  S  R  V  
                    Query_10596  91   GCCAGGCCCCCGGAAAGGGACTGGAGTGGATTGGGCAAATCTATCCTGGTGGGAGCGCCAACTACAATCCGTCCCTCAGGAGTCGAGTCG  180
V  87.1% (236/271)  IGHV4-4*02   116  .....C....A..G.....G...............G.........A.A........A..........C..........A..........A  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      A  I  S  L  D  A  S  K  S  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  G  
                    Query_10596  181  CCATTTCGTTAGACGCGTCCAAGAGCCAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCTGACACGGCCGTCTATTTTTGTGCGGGCG  270
V  87.1% (236/271)  IGHV4-4*02   206  ....A..AG.....AA........A..............A.C...G...............G...........G....AC......A.A.  295
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  

                                      -------------CDR3-IMGT------------------>                                  
                                      D  R  G  T  T  R  M  F  E  N  A  L  E  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10596  271  ACCGCGGTACGACCAGGATGTTCGAGAATGCTCTTGAGATCTGGGGTCAAGGGACAATGGTCACCGTTTCCTCAG  345
V  87.1% (236/271)  IGHV4-4*02   296  .--------------------------------------------------------------------------  296
                                                                                                                 
D  100.0% (7/7)     IGHD3-10*02  9    -----------------.......---------------------------------------------------  15
J  89.6% (43/48)    IGHJ3*02     3    ---------------------------.....T....T........C....................C..T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_195148

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           316     2e-88
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGG	AGCAGCAGCT	CTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGGAGCAGCAGCTCTATGACTAC	ARDREQQLYDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10597  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAATTCTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-21*01  47   .....................................C....G.AGC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  D  R  S  T  Y  M  S  H  A  D  S  V  K  G  R  F  T  I  S  R  D  D  G  
                    Query_10597  91   AGTGGGTCGCGTCCATTAGTGACAGAAGTACTTACATGTCCCACGCAGACTCAGTGAAGGGCCGATTCACCATTTCCAGAGACGACGGCA  180
V  90.4% (226/250)  IGHV3-21*01  137  ........T.A.........AGT..T....G......A.A.T...............................C.........A...C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  R  S  V  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  R  E  Q  Q  L  Y  
                    Query_10597  181  AGAGGTCAGTGTATCTGCAAATGAATAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGATAGGGAGCAGCAGCTCTATG  270
V  90.4% (226/250)  IGHV3-21*01  227  ...AC...C................C..............G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD6-13*01  7    ---------------------------------------------------------------------------..........-----  16
J  95.1% (39/41)    IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  L  G  T  L  V  I  V  S  S  
                    Query_10597  271  ACTACTGGGGCCTGGGAACCCTGGTCATCGTCTCCTCAG  309
J  95.1% (39/41)    IGHJ4*02     10   ............A..............C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_43449

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           439     2e-125
IGHD2-2*01                                                                                            14.1    9.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTCAATTTGGTTCCGCAAATGG	GTACCAG	N/A	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTCAATTTGGTTCCGCAAATGGGTACCAGTACGGCATGGACGTC	ARFQFGSANGYQYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	285	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_10598  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  98.6% (285/289)  IGHV5-51*03  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_10598  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATTGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.6% (285/289)  IGHV5-51*03  96   ................................................G.........................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  R  A  S  D  S  A
                    Query_10598  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACAGCGC  270
V  98.6% (285/289)  IGHV5-51*03  186  ............................................G.............................A...........C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  F  Q  F  G  S  A  N  G  Y  Q  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_10598  271  CATGTATTACTGTGCGAGATTTCAATTTGGTTCCGCAAATGGGTACCAGTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  98.6% (285/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-2*01   15   ------------------------------------------.......-----------------------------------------  21
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------------.....T...................................  55

                                             
                                        S  S 
                    Query_10598  361  CTCCTCA  367
J  97.9% (47/48)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_43448

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           304     1e-84
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-15*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCAGGGAGAG	TGTATTGGTGGTAGGTGCT	TCCCTGCCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGAGCAGGGAGAGTGTATTGGTGGTAGGTGCTTCCCTGCCTTCTTTGACTTC	AREQGECIGGRCFPAFFDF	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  N  T  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10599  1    GGTCCCTGAGACTCTCCTGTGTCGCGTCTGGATTCACCTTCAATACGTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  88.8% (222/250)  IGHV3-33*01  47   .....................CA...................G..GC.A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  S  G  R  G  N  K  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_10599  91   AGTGGGTGGCGCTTATTTGGTCTGGCAGAGGTAATAAATACTATTCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCA  180
V  88.8% (222/250)  IGHV3-33*01  137  ..........AG....A....A..ATG..A..............G.......................................A.....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      N  N  S  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  E  Q  G  E  C  I  G  
                    Query_10599  181  ACAATAGCCTCTCTCTCCAAATGAACAGCCTGCGAGCCGAGGACACGGCTATTTACTACTGTGCGCGAGAGCAGGGAGAGTGTATTGGTG  270
V  88.8% (222/250)  IGHV3-33*01  227  .G..C.CG..G.A...G...............A.................G.G..T.........A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  89.5% (17/19)    IGHD2-15*01  8    --------------------------------------------------------------------------------....G.....  17

                                      -IMGT----------------------->                                  
                                      G  R  C  F  P  A  F  F  D  F  W  G  H  G  S  L  V  S  V  S  S  
                    Query_10599  271  GTAGGTGCTTCCCTGCCTTCTTTGACTTCTGGGGCCACGGATCCCTGGTCTCCGTCTCCTCAG  333
D  89.5% (17/19)    IGHD2-15*01  18   ....C....------------------------------------------------------  26
J  90.9% (40/44)    IGHJ4*01     5    -------------------........A.........A...A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_259662

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           23.8    0.011
IGHJ2*01                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAT	TATTTCCATGATAGTCGTGGT	G	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCATTATTTCCATGATAGTCGTGGTGACTGGTACTTCGATCTC	ARDHYFHDSRGDWYFDL	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  H  D  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10600  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTCACGACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-53*01  47   ............................................AG.A..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  H  R  D  G  K  T  D  Y  A  V  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_10600  91   AGTGGGTCTCAGTTATTCATAGGGATGGAAAAACAGACTATGCAGTCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.9% (232/247)  IGHV3-53*01  137  .................T....C.G...T.GC...T....C....A............................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------------CDR3-IMGT-
                                      N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  H  Y  F  H  D  S  R  
                    Query_10600  181  ACACTGTGTATCTTCAAATGAACAGCCTGCGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGACCATTATTTCCATGATAGTCGTG  270
V  93.9% (232/247)  IGHV3-53*01  227  ....GC.......................A.....................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  85.7% (18/21)    IGHD3-22*01  2    -----------------------------------------------------------------------....A.T........A...  20

                                      ------------------->                                  
                                      G  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10600  271  GTGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  85.7% (18/21)    IGHD3-22*01  21   ..----------------------------------------------------  22
J  100.0% (51/51)   IGHJ2*01     3    ---...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_259661

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           327     9e-92
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	AGCT	CGATTTTTGGACTGGTTATT	TTAGGTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAAGCTCGATTTTTGGACTGGTTATTTTAGGTAACTTTGACTAC	AGSSIFGLVILGNFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  A  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_10601  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTAGCAGTGCTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGG  90
V  92.0% (229/249)  IGHV4-39*01  49   .............................T...........C..T...AG.........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  N  T  Y  Y  N  P  S  L  R  S  R  L  H  M  S  V  D  T  S 
                    Query_10601  91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAACACCTACTATAATCCGTCCCTCAGGAGTCGACTCCACATGTCCGTAGACACTTCT  180
V  92.0% (229/249)  IGHV4-39*01  139  ..................................G.........C..C..........A.......G..AC...A...........G..C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  I  F  G  L  V 
                    Query_10601  181  AAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCAGACACGGCTGTTTATTACTGTGCGGGAAGCTCGATTTTTGGACTGGTT  270
V  92.0% (229/249)  IGHV4-39*01  229  ...................A.....G...........................G............A..---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-3*01   7    -------------------------------------------------------------------------...........G.....  23

                                      GT------------------>                                  
                                       I  L  G  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10601  271  ATTTTAGGTAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  325
D  95.0% (19/20)    IGHD3-3*01   24   ...----------------------------------------------------  26
J  97.8% (44/45)    IGHJ4*02     4    ----------..................................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_259660

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD6-19*01                                                                                           21.8    0.040
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	C	ATAGAAGTGGCTGG	CCGTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACATAGAAGTGGCTGGCCGTTTGATGCTTTCGAGATC	ARHRSGWPFDAFEI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  Y  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_10602  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATTATCACTACTGGAGCTGGATCCGGCAGTCTCCAGGGAAGGGACTGGAG  90
V  93.8% (228/243)  IGHV4-59*01  49   ........................................G.AG.T.......................C.C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  I  Y  N  P  S  L  E  S  R  V  T  I  S  A  D  T  S  K  K 
                    Query_10602  91   TGGATTGGCTATATCTATTACAGTGGGAGCACCATCTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAG  180
V  93.8% (228/243)  IGHV4-59*01  139  ........G.........................A................A.....................T...............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  A  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  R  S  G  W  P  F  D  A 
                    Query_10602  181  CAGTTCTCCCTGAAGCTGAGCGCTGTAACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGACATAGAAGTGGCTGGCCGTTTGATGCT  270
V  93.8% (228/243)  IGHV4-59*01  229  .....................T....G....................G............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  5    ----------------------------------------------------------------....C.........------------  18
J  88.0% (44/50)    IGHJ3*02     1    -----------------------------------------------------------------------------------.......  7

                                      -------->                                  
                                       F  E  I  W  G  Q  G  I  K  V  S  V  S  S  
                    Query_10602  271  TTCGAGATCTGGGGCCAGGGGATAAAGGTCTCCGTCTCTTCAG  313
J  88.0% (44/50)    IGHJ3*02     8    ..T..T...........A....C..T....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_259666

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     4e-93
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_10603  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  S  L  K  P  R  V  T  I  S  L  D  T  S  K  N 
                    Query_10603  91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCTCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-59*08  139  ...A....G......T.......T..............................AG............A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G 
                    Query_10603  181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGT  270
V  93.4% (228/244)  IGHV4-59*08  229  .............A......C..........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_10603  271  TATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  334
J  94.2% (49/52)    IGHJ1*01     1    ------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_259668

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           285     4e-79
IGHD2-2*01                                                                                            12.2    30   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACTTTGACTTC	ARVSTSAYYFDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	213	31	0	87.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_10604  1    ACGCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGACAACCCCCAGGAAAGGGACTGGAG  90
V  87.3% (213/244)  IGHV4-59*01  49   ..C..............................T........A.....T.C.........A....G..G........G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  S  F  D  T  S  K  R 
                    Query_10604  91   TGGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGTCCTTTGACACGTCCAAGAGG  180
V  87.3% (213/244)  IGHV4-59*01  139  .......GGT....C...........G.G..C...C................A..G............A..AG.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  Y  Y  F  D 
                    Query_10604  181  CAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATACTACTTTGAC  270
V  87.3% (213/244)  IGHV4-59*01  229  .............A....AGC..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-2*01   17   ---------------------------------------------------------------------......---------------  22
J  91.3% (42/46)    IGHJ4*02     1    -------------------------------------------------------------------------------...........  11

                                      -->                                
                                       F  W  G  R  G  T  L  V  V  V  S  S
                    Query_10604  271  TTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  305
J  91.3% (42/46)    IGHJ4*02     12   .A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_158314

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         313     2e-87
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCG	TGTAGTTGTTCCAGCT	AATATCAAAATTTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATCGTGTAGTTGTTCCAGCTAATATCAAAATTTCCTACGGAATGGACGTC	ARDRVVVPANIKISYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	225	25	0	90


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  E  A  S  G  F  I  F  S  T  Y  H  M  H  W  V  R  Q  T  P  G  K  G  L  
                    Query_10605    1    GGTCCCTGAGACTCTCCTGTGAAGCGTCTGGATTCATCTTCAGTACCTATCATATGCACTGGGTCCGCCAGACTCCAGGCAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-30-3*01  47   .....................C...C..........C........G....GC...................G..................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  L  I  S  Y  D  G  S  N  T  Y  F  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10605    91   AGTGGGTGGCACTTATCTCCTATGATGGAAGCAACACATACTTCACAGACTCCGTAAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  90.0% (225/250)  IGHV3-30-3*01  137  ...........G....A..A..............T.A.....A.G..........G..................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                        K  N  T  L  Y  L  H  M  D  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  D  R  V  V  V  P  A  
                    Query_10605    181  AGAATACACTTTATCTACATATGGACAGCCTGAGACCTGAAGACACGGCTGTCTATTACTGTGCCAGAGATCGTGTAGTTGTTCCAGCTA  270
V  90.0% (225/250)  IGHV3-30-3*01  227  ....C..G..G.....G..A...A...........G....G...........G...........G.....--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD2-2*01     8    -------------------------------------------------------------------------......A..A......-  23

                                        -IMGT----------------------->                                 
                                        N  I  K  I  S  Y  G  M  D  V  W  G  P  G  T  T  V  A  V  S  S 
                    Query_10605    271  ATATCAAAATTTCCTACGGAATGGACGTCTGGGGCCCAGGGACCACGGTCGCCGTCTCCTCA  332
J  93.9% (46/49)    IGHJ6*02       14   -------------......T................A.............A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_181330

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           349     3e-98
IGHD2-15*01                                                                                           39.1    3e-07
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	T	GGATATTGTCGTGGTGGTGCCTGCTACTC	AACGGGTCGGGGGACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGATATTGTCGTGGTGGTGCCTGCTACTCAACGGGTCGGGGGACTTTTGACTAC	ARHGYCRGGACYSTGRGTFDY	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  S  T  H  H  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_10606  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGACTCCATCAGCAGCAGTACTCACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.4% (237/251)  IGHV4-39*01  49   .............................T.G............T....G.T..T...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  V  Y  Y  S  G  R  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10606  91   CTGGAGTGGATTGGGAGTGTCTATTATAGTGGGAGAACCTACGACAACCCGTCTCTCAAGAGTCGAGTCACCATATCTGTCGACACGTCC  180
V  94.4% (237/251)  IGHV4-39*01  139  ..................A................C......T..........C.......................C..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  H  G  Y  C  R  G  G 
                    Query_10606  181  AAGAATCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTTTTACTGTGCGAGACATGGATATTGTCGTGGTGGT  270
V  94.4% (237/251)  IGHV4-39*01  229  .....C.................................................A...............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.7% (26/29)    IGHD2-15*01  2    ------------------------------------------------------------------------.........A........  19

                                      CDR3-IMGT-------------------------->                                  
                                       A  C  Y  S  T  G  R  G  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10606  271  GCCTGCTACTCAACGGGTCGGGGGACTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  89.7% (26/29)    IGHD2-15*01  20   AG.........-----------------------------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_218444

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10607  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ......................................C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_10607  91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P 
                    Query_10607  181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC  270
V  90.6% (221/244)  IGHV4-59*01  229  ...........G...C....C...........T............G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  95.7% (44/46)    IGHJ5*02     6    ------------------------------------------------------------------------------............  17

                                                                        
                                       W  G  Q  G  A  L  V  S  V  S  S  
                    Query_10607  271  TGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  304
J  95.7% (44/46)    IGHJ5*02     18   ............A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_223244

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10608  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (226/248)  IGHV3-21*01  47   ............................T............AG...C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  G  
                    Query_10608  91   AGTGGGTCTCATCCATCAGTAGTAGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  91.1% (226/248)  IGHV3-21*01  137  ................T........T...AGT......T.C..C..A......G..A..............................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_10608  181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  91.1% (226/248)  IGHV3-21*01  227  ....C..................AA...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10608  271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_223245

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            321     7e-90
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TAGAGAGGTCCGCATTGA	TAGTGCTTATTAC	GAGGGACCTCC	TGACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAGAGAGGTCCGCATTGATAGTGCTTATTACGAGGGACCTCCTGACAAC	ASREVRIDSAYYEGPPDN	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  T  V  S  G  D  S  I  S  S  D  H  W  W  T  W  V  R  Q  P  P  G  K  G  
                    Query_10609  1    GGTCCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCATCAGCAGTGATCACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  91.5% (226/247)  IGHV4-4*02   47   ..A.....TCC...A....CG............G.............AG.A.........G.............................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  T  G  S  T  N  Y  N  P  S  L  G  G  R  V  S  I  S  V  D  K  S  
                    Query_10609  91   TGGAGTGGATAGGGGAAATCTATCATACTGGGAGCACCAACTACAACCCGTCCCTCGGGGGTCGAGTCTCCATATCAGTAGACAAGTCCA  180
V  91.5% (226/247)  IGHV4-4*02   137  ..........T................G............................AA.A........A.....................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  Q  F  S  L  I  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  V  R  I  D  S  
                    Query_10609  181  AGAACCAGTTCTCCCTGATACTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGTAGAGAGGTCCGCATTGATAGTG  270
V  91.5% (226/247)  IGHV4-4*02   227  ..................AG.....C.........................................-----------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  92.3% (12/13)    IGHD3-22*01  16   -------------------------------------------------------------------------------------.....  20

                                      IMGT--------------------->                                  
                                      A  Y  Y  E  G  P  P  D  N  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10609  271  CTTATTACGAGGGACCTCCTGACAACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  330
D  92.3% (12/13)    IGHD3-22*01  21   G.......----------------------------------------------------  28
J  95.1% (39/41)    IGHJ4*02     8    -------------------....T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_223246

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_10610  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_10610  91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  93.1% (228/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_10610  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACGCGGCCGTGTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  93.1% (228/245)  IGHV4-59*01  229  ...................G...................A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10610  271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_223247

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            339     2e-95
IGHD4-17*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAC	CTACGGTGACTAC	CTGGCAGGCCCCTGTAAGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACCTACGGTGACTACCTGGCAGGCCCCTGTAAGCTTGACTAC	ARTYGDYLAGPCKLDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  F  R  N  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10611  1    GGTCCCTGAGACTCTCCTGTGTAGGTTCTGGATTCACCTTTAGAAATTTTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  93.9% (232/247)  IGHV3-7*03   47   .....................C..CC.................T.GC.A....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  D  K  D  G  S  E  I  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10611  91   AGTGGGTGGCCAACATAGACAAAGATGGAAGTGAGATATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.9% (232/247)  IGHV3-7*03   137  .................A.GC...............A.....................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  S  L  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  T  Y  G  D  Y  L  A  
                    Query_10611  181  GGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTGTATTACTGTGCGAGGACCTACGGTGACTACCTGGCAG  270
V  93.9% (232/247)  IGHV3-7*03   227  A...........A...........................G..........................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (13/13)   IGHD4-17*01  4    ----------------------------------------------------------------------.............-------  16

                                      T------------------>                                  
                                      G  P  C  K  L  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10611  271  GCCCCTGTAAGCTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  324
J  97.6% (41/42)    IGHJ4*02     7    ------------....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_86109

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           230     1e-62
IGHD3-22*01                                                                                           21.8    0.044
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GCGTCACACCCCGA	TATTTCTATGACAATAGTGG	ATTTTATAATGAGGGTGGC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGCGTCACACCCCGATATTTCTATGACAATAGTGGATTTTATAATGAGGGTGGCTTTGATTTC	AKGVTPRYFYDNSGFYNEGGFDF	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	25	4	0	86.2
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	93	21	0	81.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	198	51	0	79.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  T  S  G  F  T  F  S  G  Y  S  M  T  W  V  R  Q  A  P  G  K  P  L  
                    Query_10612  1    GGTCCCTGAGACTCTCCTGTGAGACCTCGGGATTCACATTCAGTGGATACTCTATGACGTGGGTCCGCCAGGCCCCAGGGAAGCCTCTGG  90
V  79.5% (198/249)  IGHV3-23*01  47   .....................CAG....T........C..T..CA.C..TG.C....GC..............T.........GGG....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  F  S  G  S  A  N  R  R  F  Y  T  D  S  V  R  G  R  F  S  I  S  R  D  N  S  
                    Query_10612  91   AGTGGGTCTCAACTTTCAGTGGAAGTGCAAATAGACGCTTCTACACAGACTCCGTGAGGGGCCGATTTTCCATCTCCAGAGACAATTCCA  180
V  79.5% (198/249)  IGHV3-23*01  137  ...........G..A.T.....T....GTGG...CACA.A....G............A......G..CA.....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      R  D  T  V  F  L  Q  T  G  R  L  R  P  E  D  T  A  M  Y  Y  C  A  K  G  V  T  P  R  Y  F  
                    Query_10612  181  GGGACACGGTGTTTCTCCAGACGGGCAGACTGAGACCCGAAGACACGGCCATGTATTATTGTGCGAAAGGCGTCACACCCCGATATTTCT  270
V  79.5% (198/249)  IGHV3-23*01  227  A.A.....C...A...G..A.T.AA...C......G....G.........G.A.....C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  85.0% (17/20)    IGHD3-22*01  2    -----------------------------------------------------------------------------------....A..  8

                                      --CDR3-IMGT----------------------------->                                  
                                      Y  D  N  S  G  F  Y  N  E  G  G  F  D  F  W  G  Q  G  T  M  V  P  I  S  S  
                    Query_10612  271  ATGACAATAGTGGATTTTATAATGAGGGTGGCTTTGATTTCTGGGGCCAAGGGACAATGGTCCCCATCTCTTCAG  345
D  85.0% (17/20)    IGHD3-22*01  9    ....T.G......--------------------------------------------------------------  21
J  93.0% (40/43)    IGHJ3*01     8    --------------------------------......G.......................A..G.........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_223241

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-19*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCG	GCAGTGGCTGGTAC	GGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCGGCAGTGGCTGGTACGGGATTGACTAC	AKDRGSGWYGIDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_10613  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGCTGGATCCGGCAGACCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   .............................................T.......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_10613  91   TGGATTGGGTATATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ....................C...................................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  D  R  G  S  G  W  Y  G  I 
                    Query_10613  181  CAGTTCTCCCTGAGGCTGAACTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAAAGATCGCGGCAGTGGCTGGTACGGGATT  270
V  96.7% (237/245)  IGHV4-59*01  229  .............A.....G...........................G.............G...-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (14/14)   IGHD6-19*01  8    ----------------------------------------------------------------------..............------  21
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10613  271  GACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  310
J  97.6% (41/42)    IGHJ4*02     9    ...................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_56568

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           400     9e-114
IGHD4-17*01                                                                                           16.1    2.5   
IGHJ1*01                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD4-17*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGG	ACGGTGAC	GCTCTTTTGCGAGA	TGAAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGACGGTGACGCTCTTTTGCGAGATGAATACTTCCAACAC	ARRDGDALLRDEYFQH	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  A  Y  S  F  T  N  Y
                    Query_10614  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCTTGTAAAGGTTCTGCATACAGCTTTACCAACTA  90
V  94.1% (273/290)  IGHV5-51*01  6    .........................................................C.....G.......G..............G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  G  D  S  D  A  R  Y  S  P
                    Query_10614  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGCATCATCTTTCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  94.1% (273/290)  IGHV5-51*01  96   ........G..........................................G.......A................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  I  T  L  S  A  D  K  S  V  S  T  V  Y  L  Q  W  R  S  L  K  A  P  D  T  A
                    Query_10614  181  GTCCTTCCAAGGCCACATCACCCTCTCAGCCGACAAGTCCGTCAGCACCGTCTACCTGCAGTGGAGGAGCCTGAAGGCCCCCGACACCGC  270
V  94.1% (273/290)  IGHV5-51*01  186  ...............GG.....A.................A.........C...............C............T.G........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        I  Y  Y  C  A  R  R  D  G  D  A  L  L  R  D  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S
                    Query_10614  271  CATATATTACTGTGCGAGACGGGACGGTGACGCTCTTTTGCGAGATGAATACTTCCAACACTGGGGCCAGGGAACCCTGGTCACCGTCTC  360
V  94.1% (273/290)  IGHV5-51*01  276  ...G................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD4-17*01  6    -----------------------........-----------------------------------------------------------  13
J  96.0% (48/50)    IGHJ1*01     3    ---------------------------------------------............G..............C.................  47

                                           
                                        S  
                    Query_10614  361  CTCAG  365
J  96.0% (48/50)    IGHJ1*01     48   .....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_223243

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            311     4e-87
IGHD2-21*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCGACCGAGGA	ACTGCTA	ACCTCTTCGAGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACCGAGGAACTGCTAACCTCTTCGAGAATGCTCTTAGTATC	AADRGTANLFENALSI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  R  G  H  I  T  S  S  H  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_10615  1    ACCCTGTCCCTCACCTGCGCTGTCTCTCGTGGCCACATCACCAGTAGTCACTGGTGGAACTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.9% (221/243)  IGHV4-4*02   49   ...........................G.....TC.....G.......A.........GT..............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  Q  I  Y  Q  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  K  S  R 
                    Query_10615  91   GAGTGGATTGGACAAATTTATCAGAGTGGGAGCACCAATTATAACCCGTCCCTCAGGAGTCGAGTCACCATTTCAGTGGACAAGTCCAGG  180
V  90.9% (221/243)  IGHV4-4*02   139  ...........GG....C.....T..............C..C.............A...............A.....A..........A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  L  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  A  D  R  G  T  A  N  L  F 
                    Query_10615  181  AACCTCTTCTCCCTGACGCTGACCTCTGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGGCCGACCGAGGAACTGCTAACCTCTTC  270
V  90.9% (221/243)  IGHV4-4*02   229  ....AG..........A.....G...........................G............---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD2-21*02  18   ---------------------------------------------------------------------------.......--------  24

                                      ----------------->                                  
                                       E  N  A  L  S  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10615  271  GAGAATGCTCTTAGTATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  93.8% (45/48)    IGHJ3*02     3    ----.....T..GA......................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_56566

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           251     9e-69
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	91	23	0	79.8
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	202	42	0	82.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_10616  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  82.8% (202/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  N  L  S  G  D  T  T  R  N 
                    Query_10616  91   TGGCTTGGCTTCTTCTTATCCACCGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTTAACCTGTCAGGAGACACGACTAGGAAT  180
V  82.8% (202/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..GT.........A..............C...A......A..C.C.A.A....T.......T.C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_10616  181  CAGTTGTCCCTCAATCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACGTAT  270
V  82.8% (202/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_10616  271  GTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    ---------------------------------...G....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_56567

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           286     1e-79
IGHD2-8*01                                                                                            14.1    8.8  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGGAGGGGGCTGCGGGAA	TGTACTA	TAACGGACGGCGGGGAATC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGGAGGGGGCTGCGGGAATGTACTATAACGGACGGCGGGGAATCATGGACGTC	ARLEGAAGMYYNGRRGIMDV	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	100	14	0	87.7
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	215	32	0	87


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  R  R  N  T  D  F  W  V  W  I  R  Q  P  P  G  K  G  
                    Query_10617  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGGAGGAATACTGACTTCTGGGTCTGGATCCGGCAGCCCCCCGGGAAGGGGC  93
V  87.0% (215/247)  IGHV4-39*01  50   .....TCC...A............................C..T.G..G.T...A.....G.........C........A..........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  A  I  H  Y  T  G  S  T  Y  Y  N  S  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_10617  94   TGGAGTGGATTGGGGCGATCCATTATACTGGGAGCACCTATTACAACTCGTCCCTCAAGAGTCGAGTCACCATCTCCGTGGACACGTCCA  183
V  87.0% (215/247)  IGHV4-39*01  140  ..............AGT...T......G............C......C.........................A.....A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      R  N  Q  F  S  L  N  L  R  S  V  T  A  T  D  T  S  V  F  Y  C  A  R  L  E  G  A  A  G  M  
                    Query_10617  184  GGAACCAGTTCTCCCTGAACCTAAGGTCTGTGACTGCCACAGACACGTCTGTTTTCTACTGTGCGAGGCTGGAGGGGGCTGCGGGAATGT  273
V  87.0% (215/247)  IGHV4-39*01  230  A..................G..G..C........C...G........G....G.AT...........-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-8*01   8    ---------------------------------------------------------------------------------------...  10

                                      R3-IMGT------------------------>                                 
                                      Y  Y  N  G  R  R  G  I  M  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_10617  274  ACTATAACGGACGGCGGGGAATCATGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  338
D  100.0% (7/7)     IGHD2-8*01   11   ....-------------------------------------------------------------  14
J  97.6% (41/42)    IGHJ6*02     21   -----------------------........................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_56564

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           318     6e-89
IGHD2-8*02                                                                                            18.0    0.60 
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATTGTCGGTGTTGGC	TATTGCACTGGT	AGCAGTTGTTCCCCTCCGTCT	GACGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGTCGGTGTTGGCTATTGCACTGGTAGCAGTTGTTCCCCTCCGTCTGACGCC	ARIVGVGYCTGSSCSPPSDA	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  F  S  Y  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_10618  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGGTCCTTCAGTTATTACTACTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTGGAG  90
V  91.8% (223/243)  IGHV4-34*01  49   ..................G......A................GG............C...A.............A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  D  I  N  Q  S  G  S  T  N  Y  S  P  S  L  E  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_10618  91   TGGATTGGTGACATCAATCAAAGTGGAAGCACCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCATATCAATAGACACGTCGAAGAAC  180
V  91.8% (223/243)  IGHV4-34*01  139  ........G..A........T...................A..........A....................G..........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  K  S  L  A  A  A  D  T  A  V  Y  F  C  A  R  I  V  G  V  G  Y  C  T  G 
                    Query_10618  181  CAGTTCTCCCTGAAGCTGAAGTCTTTGGCCGCCGCGGACACGGCTGTCTATTTCTGTGCGAGAATTGTCGGTGTTGGCTATTGCACTGGT  270
V  91.8% (223/243)  IGHV4-34*01  229  ...................GC...G..A...................G....A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD2-8*02   5    ------------------------------------------------------------------------------.....T......  16

                                      GT------------------------>                                  
                                       S  S  C  S  P  P  S  D  A  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10618  271  AGCAGTTGTTCCCCTCCGTCTGACGCCTGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  331
J  95.0% (38/40)    IGHJ5*02     12   ---------------------...C................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_63727

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           357     1e-100
IGHD3-10*01                                                                                           10.3    123   
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-10*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CG	GGTTC	CATCTGTCCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGACGGGTTCCATCTGTCCCCCTACTGGTACTTCGATCTC	ARDGFHLSPYWYFDL	249	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	110	4	0	96.5
CDR3-IMGT (germline)	249	256	8	5	3	0	62.5
Total	N/A	N/A	256	242	14	0	94.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10619  1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCACCTTTGGTGATTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  94.5% (242/256)  IGHV3-49*04  47   .........................T..........................T................................G....  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  T  R  S  K  T  Y  G  G  T  A  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_10619  91   AGTGGGTAGGTTTCACTAGAAGCAAGACTTATGGTGGGACAGCAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  94.5% (242/256)  IGHV3-49*04  137  ...............T.........AG..............A................................................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------------CDR3
                                      D  S  K  S  I  A  F  L  *  M  D  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  D  G  F  H  L  
                    Query_10619  181  ATTCCAAAAGCATCGCCTTTCTGTGAATGGACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTGCCAGGGACGGGTTCCATCTGT  270
V  94.5% (242/256)  IGHV3-49*04  227  ..................A....CA....A......................................A.T..A..--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (5/5)     IGHD3-10*01  11   ------------------------------------------------------------------------------.....-------  15

                                      -IMGT----------------->                                  
                                      S  P  Y  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  P  S  
                    Query_10619  271  CCCCCTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCCCCTCAG  327
J  96.2% (51/53)    IGHJ2*01     1    ----........................................A.....T......  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_86101

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           294     6e-82
IGHD6-25*01                                                                                           18.0    0.58 
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-25*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	CAGCGGCTA	AAACTACTCGATACAGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGATCAGCGGCTAAAACTACTCGATACAGTTGGTTCGACCCA	SRSAAKTTRYSWFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  G  S  G  F  S  F  I  S  Y  S  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10620  1    GGTCCCTGAGACTCTCCTGTTCAGGCTCTGGATTCTCTTTTATTTCGTATAGCATCAACTGGGTCCGCCAGGCTCCCGGGAAGGGGCTGG  90
V  87.9% (218/248)  IGHV3-21*01  47   ....................G...C..........A.C..C.G.AGC........G....................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  A  S  G  D  Y  I  Y  Y  I  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_10620  91   AGTGGGTCTCATCTGTCAGTGCTAGCGGTGACTACATATACTACATAGACTCAGTGAGGGGCCGATTCACCATCTCTAGAGACAACGCCA  180
V  87.9% (218/248)  IGHV3-21*01  137  .............CA.T...AG...TA..AGT............GC...........A..................C.............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  K  S  V  Y  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  S  R  S  A  A  K  T  T  R  
                    Query_10620  181  AGAAGTCAGTGTATCTGCAGATGAACGGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTTCGAGATCAGCGGCTAAAACTACTCGAT  270
V  87.9% (218/248)  IGHV3-21*01  227  ....C...C..........A......A...................................G.....----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-25*01  9    ---------------------------------------------------------------------.........------------  17

                                      ---------------->                                  
                                      Y  S  W  F  D  P  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_10620  271  ACAGTTGGTTCGACCCATGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  321
J  95.7% (44/46)    IGHJ5*02     6    -----...........C.....................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_63721

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           347     7e-98
IGHD6-13*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTGGT	CAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTGGTCAGCAGCTGACTGACTAC	ARDSGQQLTDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10621  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGCACTTATAGCATGAACTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-21*01  47   ...................................A.......T.GC.............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  G  S  S  G  F  I  Y  Y  A  N  S  V  E  G  R  I  T  I  S  R  D  N  A  
                    Query_10621  91   AGTGGGTCTCATCTATTACTGGTAGTAGTGGTTTCATATACTACGCAAACTCAGTGGAGGGCCGAATCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-21*01  137  .............C....G.A........A...A.............G........A........T........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  G  Q  Q  L  T  
                    Query_10621  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGATTCTGGTCAGCAGCTGACTG  270
V  94.4% (236/250)  IGHV3-21*01  227  ....................................................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-13*01  9    -----------------------------------------------------------------------------.........----  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10621  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (41/41)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_63722

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           336     1e-94
IGHD1-1*01                                                                                            10.3    123  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	TCACAAATTCGCA	GGAAC	CC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACTCACAAATTCGCAGGAACCCTTGAGTTC	TTHKFAGTLEF	261	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	65	36	24	0	12	66.7
FR2-IMGT	66	116	51	50	1	0	98
CDR2-IMGT	117	146	30	26	4	0	86.7
FR3-IMGT	147	260	114	109	5	0	95.6
CDR3-IMGT (germline)	261	265	5	5	0	0	100
Total	N/A	N/A	265	242	11	12	91.3


Alignments

                                      <---------FR1-IMGT----------><-------------CDR1-IMGT------------><--------------------FR2-
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  G  P  
                    Query_10622  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCGGATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGGTCCAG  90
V  91.3% (242/265)  IGHV3-15*01  47   .......T.........................------------.......................................C.....  124
                                         S  L  R  L  S  C  A  A  S  G              F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  

                                      IMGT---------------------><----------CDR2-IMGT---------><---------------------------------
                                      G  K  G  L  E  W  V  G  R  I  I  S  E  I  G  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  
                    Query_10622  91   GGAAGGGGCTGGAGTGGGTTGGCCGTATTATAAGCGAAATTGGTGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCA  180
V  91.3% (242/265)  IGHV3-15*01  125  ..............................A....A...C..A...............................................  214
                                      G  K  G  L  E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  A  G  L  Y  Y  C  T  T  H  
                    Query_10622  181  TCTCAAGAGATGATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTTAAAACCGAGGACGCAGGCCTGTATTACTGCACCACTCACA  270
V  91.3% (242/265)  IGHV3-15*01  215  .................................................G............A...C.G..........T.....-----  299
                                      I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T     

                                      --CDR3-IMGT----------->                                  
                                      K  F  A  G  T  L  E  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10622  271  AATTCGCAGGAACCCTTGAGTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (5/5)     IGHD1-1*01   10   --------.....--------------------------------------------  14
J  95.2% (40/42)    IGHJ4*02     7    ---------------....C.A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_56561

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD1-26*01                                                                                           19.9    0.14 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGA	AGTGGGAGCT	CA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAAGTGGGAGCTCAGACTAC	ARDRSGSSDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  F  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10623  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCTTCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   ....................................A........................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  V  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  I  D  T  S  K  N 
                    Query_10623  91   TGGATTGGCTATATATATTACACTGGGGTCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCTTATCAATAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G.....C.......G....AG......C..............................A.....G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  S  G  S  S  D  Y  W 
                    Query_10623  181  CAGTTCTCCCTGAAGCTGAGTTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGATCGAAGTGGGAGCTCAGACTACTGG  270
V  95.1% (233/245)  IGHV4-59*01  229  ....................C................................C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD1-26*01  6    ---------------------------------------------------------------------..........-----------  15
J  100.0% (40/40)   IGHJ4*02     9    ---------------------------------------------------------------------------------.........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_10623  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (40/40)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_7800

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	CGTGCAGGGGTCGTTA	TACGATTTTTGGAGTGG	GTTCCTGGGA	CCCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACGTGCAGGGGTCGTTATACGATTTTTGGAGTGGGTTCCTGGGACCC	ANVQGSLYDFWSGFLGP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	229	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  Y  T  F  R  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10624  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTACACCTTTAGAAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (229/247)  IGHV3-23*01  47   ...............................A.T.........C..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  S  G  S  N  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10624  91   AGTGGGTCTCAGTTATTAGTGGTAGTGGAAGTAACATATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  92.7% (229/247)  IGHV3-23*01  137  ............C...............TG...G..C................................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  S  A  I  Y  Y  C  A  N  V  Q  G  S  L  Y  D  
                    Query_10624  181  GGAATACCCTGTATCTTCAAATGAATACCCTGAGAGCCGAGGACTCGGCCATATATTACTGTGCGAACGTGCAGGGGTCGTTATACGATT  270
V  92.7% (229/247)  IGHV3-23*01  227  A...C..G........G........C.G................A.....G................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (17/17)   IGHD3-3*01   5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                      F  W  S  G  F  L  G  P  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10624  271  TTTGGAGTGGGTTCCTGGGACCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  327
D  100.0% (17/17)   IGHD3-3*01   12   ..........-----------------------------------------------  21
J  97.3% (36/37)    IGHJ5*02     15   --------------------................C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_7801

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           374     8e-106
IGHD1-26*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GTTCCGTAGG	AGTGGGAGCTACTAC	ACTTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGTTCCGTAGGAGTGGGAGCTACTACACTTTGGTACTTTGACTAC	AKGSVGVGATTLWYFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	244	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  M  G  L  
                    Query_10625  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGATGGGGCTGG  90
V  98.0% (244/249)  IGHV3-23*01  47   .................................................................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  R  S  T  Y  Y  A  D  S  V  K  G  R  F  T  F  S  R  D  N  S  
                    Query_10625  91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTCGCAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCTTCTCCAGAGACAATTCCA  180
V  98.0% (244/249)  IGHV3-23*01  137  .............................G.T.......................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  S  V  G  V  G  A  
                    Query_10625  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAAGGTTCCGTAGGAGTGGGAGCTA  270
V  98.0% (244/249)  IGHV3-23*01  227  ....................................................A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD1-26*01  6    -------------------------------------------------------------------------------...........  16

                                      GT-------------------->                                  
                                      T  T  L  W  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10625  271  CTACACTTTGGTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  327
D  100.0% (15/15)   IGHD1-26*01  17   ....-----------------------------------------------------  20
J  97.8% (45/46)    IGHJ4*02     3    -----------........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_7802

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD2-21*02                                                                                           14.1    8.2   
IGHJ3*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAGAC	GGTGGTAACT	CCTGG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGACGGTGGTAACTCCTGGGATGCTTTTGATATC	ARQDGGNSWDAFDI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10626  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (239/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  S  P  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10626  91   TGGATTGGGTATATCTATTACACTGGGAGCACCAACTACAACCCCTCCCCCAAGAGTCGAGTCACCATCTCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  ......................G..........................T..................A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  D  G  G  N  S  W  D  A 
                    Query_10626  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGACAAGACGGTGGTAACTCCTGGGATGCT  270
V  98.4% (239/243)  IGHV4-59*01  229  ...................G...........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD2-21*02  11   ---------------------------------------------------------------------......G...-----------  20
J  98.0% (48/49)    IGHJ3*02     2    ------------------------------------------------------------------------------------......  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  M  V  T  V  S  P  
                    Query_10626  271  TTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTCCAG  313
J  98.0% (48/49)    IGHJ3*02     8    .......................................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_7803

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           299     2e-83
IGHD1-26*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCCTAA	TGGGAGC	GACCGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCCTAATGGGAGCGACCGTTTTTGACTAC	AKVLMGATVFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	220	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  T  S  G  F  T  F  S  D  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10627  1    GGTCCCTGAGACTCTCCTGTGAAACCTCAGGATTCACCTTCAGCGACTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  88.4% (220/249)  IGHV3-23*01  47   .....................C.G....T...........T...AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  N  R  G  R  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  K  S  
                    Query_10627  91   AGTGGGTCTCAGGTATTAGTAATCGTGGTCGAAACACCTACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAAGTCCA  180
V  88.4% (220/249)  IGHV3-23*01  137  ............C.......GG.A.....G.T.G...A...............................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  R  T  V  Y  L  Q  M  N  N  L  R  G  D  D  T  A  I  Y  F  C  A  K  V  L  M  G  A  T  V  
                    Query_10627  181  AGAGGACGGTATATTTGCAGATGAACAACTTGAGAGGCGACGACACGGCCATTTATTTCTGTGCGAAAGTCCTAATGGGAGCGACCGTTT  270
V  88.4% (220/249)  IGHV3-23*01  227  ...AC...C.G...C....A.......G.C......C...G.........G.A....A...........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD1-26*01  8    ---------------------------------------------------------------------------.......--------  14
J  93.0% (40/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  V  L  V  T  V  S  A  
                    Query_10627  271  TTGACTACTGGGGCCAGGGAGTCCTGGTCACCGTCTCCGCAG  312
J  93.0% (40/43)    IGHJ4*02     7    ....................AC................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_7805

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	274	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_10628  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  95.1% (274/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_10628  91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  95.1% (274/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_10628  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  95.1% (274/288)  IGHV5-51*01  186  ...............G.........................T.........................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10628  271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  95.1% (274/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_7806

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*07                                                                                           347     7e-98
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*07	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACCGGGGG	AGCAATGGCTGG	GGAAGGTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTATGGACGCC	ARGHRGSNGWGRYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  I  V  S  G  D  S  I  S  T  T  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_10629  1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGACTCCATCAGCACTACTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.4% (236/250)  IGHV4-39*07  49   ...................C...........G...........G..G...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  G  I  Y  Y  T  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10629  91   CTGGAGTGGATTGGGGGTATCTATTATACTGGGAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  94.4% (236/250)  IGHV4-39*07  139  ...............A............G.....G.......................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  Y  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  G  S  N  G 
                    Query_10629  181  AAGAACCAGTTTTACCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGGGAGCAATGGC  270
V  94.4% (236/250)  IGHV4-39*07  229  ...........C.C......GC............C...............C........C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  R  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  I  S  S 
                    Query_10629  271  TGGGGAAGGTACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCATCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.............T................A.....A..G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_86665

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            344     6e-97
IGHD1-1*01                                                                                            14.1    8.1  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACTAAAACAAGAC	CTGGGACGAC	G	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACTAAAACAAGACCTGGGACGACG	ARDTKTRPGTT	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  G  S  I  S  S  I  Y  Y  W  T  W  V  R  Q  P  P  G  K  G  
                    Query_10630  1    GGTCCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATCAGCAGTATTTACTACTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  94.0% (235/250)  IGHV4-4*02   47   ..A.....TCC...A....C............................G.A...GG....G.............................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  S  G  T  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  
                    Query_10630  91   TGGAGTGGATTGGGGAAATCTATCATAGTGGGACCGCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCA  180
V  94.0% (235/250)  IGHV4-4*02   137  .................................G.A......................................................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  K  T  R  P  G  
                    Query_10630  181  AGAACCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATACTAAAACAAGACCTGGGA  270
V  94.0% (235/250)  IGHV4-4*02   227  ...................G....G.............................................--------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD1-1*01   8    ------------------------------------------------------------------------------------....A.  13

                                      ---->                                  
                                      T  T  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10630  271  CGACGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
D  90.0% (9/10)     IGHD1-1*01   14   ....-----------------------------------  17
J  100.0% (34/34)   IGHJ4*02     15   -----..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_55035

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           360     1e-101
IGHD4-4*01                                                                                            12.2    30    
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-4*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	CTACAG	GTTACGGGG	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTACAGGTTACGGGGGGTATGGACGTC	ARGLQVTGGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	237	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  N  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10631  1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (237/244)  IGHV4-59*01  49   ...................C...................................G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  T  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10631  91   TGGATTGGGTATATCCATTACAGTGGGACCACCAGCTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.1% (237/244)  IGHV4-59*01  139  ...............T............G.....A.......................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Q  V  T  G  G  M  D 
                    Query_10631  181  CACTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCTACAGGTTACGGGGGGTATGGAC  270
V  97.1% (237/244)  IGHV4-59*01  229  ..G................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD4-4*01   4    ------------------------------------------------------------------......------------------  9
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------.........  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10631  271  GTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  306
J  100.0% (45/45)   IGHJ6*02     27   ....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_55034

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           420     7e-120
IGHD3-22*01                                                                                           39.1    3e-07 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AG	TTACTATGATAGTGGTGGTTATT	TCGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTTACTATGATAGTGGTGGTTATTTCGGCTTTGACTAC	ARSYYDSGGYFGFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  T  F  S  S  Y
                    Query_10632  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAGCAGCTA  90
V  96.5% (279/289)  IGHV1-69*01  6    ..................G.......................................................G...............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        I  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  F  L  G  T  T  N  Q  A  Q
                    Query_10632  91   TATTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTTTCTTGGGTACAACAAACCAAGCACA  180
V  96.5% (279/289)  IGHV1-69*01  96   .GC.............................................................A....T......G.....T.C.....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  P  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_10632  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAACCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  96.5% (279/289)  IGHV1-69*01  186  .....................................T....................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  S  Y  Y  D  S  G  G  Y  F  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_10632  271  CGTGTATTACTGTGCGAGAAGTTACTATGATAGTGGTGGTTATTTCGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  96.5% (279/289)  IGHV1-69*01  276  ...................-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  95.7% (22/23)    IGHD3-22*01  4    ---------------------.............A.........----------------------------------------------  26
J  100.0% (44/44)   IGHJ4*02     5    ------------------------------------------------..........................................  46

                                        
                                        
                    Query_10632  361  AG  362
J  100.0% (44/44)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_55036

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*02                                                                                           325     2e-91
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCCGGTGT	GGGGAG	ATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCCGGTGTGGGGAGATCTTGACTAC	AREPVWGDLDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  R  M  H  W  V  R  Q  A  P  E  K  G  L  
                    Query_10633  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTCCTATAGGATGCACTGGGTCCGCCAGGCTCCAGAGAAGGGACTGG  90
V  91.6% (229/250)  IGHV3-64*02  47   ............................................AG....GCT.........................G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  A  A  I  T  E  N  G  G  T  T  F  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10633  91   AATATGTTGCAGCTATTACTGAAAATGGGGGAACCACATTTTATACAGACTCTGTGAAGGGCAGATTCACTATCTCCAGAGACAATTCCA  180
V  91.6% (229/250)  IGHV3-64*02  137  ........T.........G.AGT........T.G.....A....G.........................C...................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  E  M  G  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  E  P  V  W  G  D  L  
                    Query_10633  181  AGAACACGCTGTTCCTTGAAATGGGCAGCCTGAGAGTTGAGGACACGGCTGTGTATTACTGTGCGAGAGAGCCGGTGTGGGGAGATCTTG  270
V  91.6% (229/250)  IGHV3-64*02  227  ............AT...C..................C........T........................--------------------  296
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01  16   ------------------------------------------------------------------------------......------  21
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10633  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCATCAG  309
J  97.6% (41/42)    IGHJ4*02     10   ..................................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_55031

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           364     5e-103
IGHD3-10*01                                                                                           12.2    32    
IGHJ2*01                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCCGACCCTAGTGAATCTTA	ATTATA	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCCGACCCTAGTGAATCTTAATTATAACTGGTACTTCGATCTC	AKPTLVNLNYNWYFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10634  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (240/247)  IGHV3-23*01  47   ............................T.............................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  D  R  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10634  91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGATAGAACATTTTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  97.2% (240/247)  IGHV3-23*01  137  ..............................G...C....AC.................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  T  L  V  N  L  N  
                    Query_10634  181  AGAACACGCTGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAAGCCGACCCTAGTGAATCTTAATT  270
V  97.2% (240/247)  IGHV3-23*01  227  ...................A................................A..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-10*01  24   ---------------------------------------------------------------------------------------...  26

                                      T------------------>                                  
                                      Y  N  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10634  271  ATAACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  100.0% (6/6)     IGHD3-10*01  27   ...---------------------------------------------------  29
J  100.0% (51/51)   IGHJ2*01     3    ---...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_56887

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            324     8e-91
IGHD1-26*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	GCTGGGC	GGGAGCT	GGACCCCAGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAAAGATGCTGGGCGGGAGCTGGACCCCAGTTACTTAAACTAC	AKDAGRELDPSYLNY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	251	9	8	1	0	88.9
Total	N/A	N/A	251	229	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_10635  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAGGGGCCTGG  90
V  91.2% (229/251)  IGHV3-9*01   47   ....................................CC...........................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  G  W  N  G  D  S  I  G  Y  A  G  A  V  Y  G  R  F  T  I  S  R  D  N  A  
                    Query_10635  91   AGTGGGTCTCAGGTATTGGTTGGAATGGGGATAGCATCGGCTACGCGGGCGCTGTGTATGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.2% (229/251)  IGHV3-9*01   137  .................A........A.T.G......A.....T....A.T.....A.G...............................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  K  S  V  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  A  G  R  E  L  D  
                    Query_10635  181  AGAAGTCCGTCTACCTGCAAATGAACAGTCTGAGACCTGAGGACACGGCCGTTTATTATTGTGCTAAAGATGCTGGGCGGGAGCTGGACC  270
V  91.2% (229/251)  IGHV3-9*01   227  ....C...C.G..T.....................G..............T.G.....C.....A......-------------------  297
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (7/7)     IGHD1-26*01  9    ------------------------------------------------------------------------------.......-----  15

                                      ---------------->                                  
                                      P  S  Y  L  N  Y  W  G  Q  G  T  V  V  I  V  S  S  
                    Query_10635  271  CCAGTTACTTAAACTACTGGGGCCAGGGAACCGTGGTCATCGTCTCCTCAG  321
J  91.3% (42/46)    IGHJ4*02     3    -----.....TG....................C......C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_55032

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            341     5e-96
IGHD1-1*01                                                                                            14.1    8.1  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACTAAAACAAGAC	CTGGGACGAC	G	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACTAAAACAAGACCTGGGACGACG	ARDTKTRPGTT	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	24	3	0	88.9
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	21	0	0	100
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  G  S  M  R  N  S  N  W  W  T  W  V  R  Q  P  P  G  K  G  
                    Query_10636  1    GGTCCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATGAGGAATAGTAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  93.6% (234/250)  IGHV4-4*02   47   ..A.....TCC...A....C....................C..C.G..............G.............................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  G  T  I  S  L  D  K  S  
                    Query_10636  91   TGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGGCACCATATCCCTAGACAAGTCTA  180
V  93.6% (234/250)  IGHV4-4*02   137  ..................................................................T.........AG..........C.  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  K  T  R  P  G  
                    Query_10636  181  AGAACCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATACTAAAACAAGACCTGGGA  270
V  93.6% (234/250)  IGHV4-4*02   227  ...................G....G.............................................--------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD1-1*01   8    ------------------------------------------------------------------------------------....A.  13

                                      ---->                                  
                                      T  T  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10636  271  CGACGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
D  90.0% (9/10)     IGHD1-1*01   14   ....-----------------------------------  17
J  100.0% (34/34)   IGHJ4*02     15   -----..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_292419

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           335     5e-94
IGHD2-15*01                                                                                           14.1    9.7  
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	GGCC	GGATATT	CATCTGATGGACGTGAATATATGACCCCGTTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGGGCCGGATATTCATCTGATGGACGTGAATATATGACCCCGTTGTTTGACTTT	SRAGYSSDGREYMTPLFDF	283	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	69	66	61	5	0	92.4
CDR1-IMGT	70	93	24	20	4	0	83.3
FR2-IMGT	94	144	51	47	4	0	92.2
CDR2-IMGT	145	168	24	19	5	0	79.2
FR3-IMGT	169	282	114	98	16	0	86
CDR3-IMGT (germline)	283	287	5	4	1	0	80
Total	N/A	N/A	284	249	35	0	87.7


Alignments

                                      <----------------------------FR1-IMGT----------------------------><-------CDR1-IMGT------>
                                       L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I  N  Y  G 
                    Query_10637  4    CTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGACAATCTCCTGCCAGGCTTCCGGTTACAGTTTTATCAACTACGGT  93
V  87.7% (249/284)  IGHV1-18*04  10   ..............................................AGG........A.......T.......CC....C..G.......  99
                                       L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y  G 

                                      <--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------------
                                       I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  P  H  K  G  N  T  K  Y  A  Q  S 
                    Query_10637  94   ATCAGTTGGGTGCGACAGGCCCCTGGACAGGGGCTCGAGTGGATGGGTTGGATCGGCCCGCACAAAGGTAACACAAAATATGCACAGAGT  183
V  87.7% (249/284)  IGHV1-18*04  100  .....C.......................A.....T...........A......A..G.TT....T...........C..........AG  189
                                       I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q  K 

                                      --------------------------------------FR3-IMGT--------------------------------------------
                                       F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  H  L  D  V  R  N  L  R  S  D  D  T  A  V 
                    Query_10637  184  TTCCAGGGCAGAGTCACGATGACCACAGACACATTGACGGGCACAGCTCACCTGGACGTGAGGAACCTGCGATCTGACGACACGGCCGTC  273
V  87.7% (249/284)  IGHV1-18*04  190  C................C................CC...A.......CT..A....GC......G....A...................G  279
                                       L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A  V 

                                      --------><-----------------------CDR3-IMGT----------------------->                        
                                       Y  Y  C  S  R  A  G  Y  S  S  D  G  R  E  Y  M  T  P  L  F  D  F  W  G  Q  G  T  P  V  S 
                    Query_10637  274  TATTACTGTTCGAGGGCCGGATATTCATCTGATGGACGTGAATATATGACCCCGTTGTTTGACTTTTGGGGCCAGGGAACCCCGGTCTCC  363
V  87.7% (249/284)  IGHV1-18*04  280  .........G....----------------------------------------------------------------------------  293
                                       Y  Y  C  A                                                                               
D  100.0% (7/7)     IGHD2-15*01  2    ------------------.......-----------------------------------------------------------------  8
J  90.7% (39/43)    IGHJ4*02     6    ---------------------------------------------------------.......AC................T....A..  38

                                                
                                       V  S  S  
                    Query_10637  364  GTCTCCTCAG  373
J  90.7% (39/43)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_68842

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           308     4e-86
IGHD2-15*01                                                                                           29.5    2e-04
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCGGGACG	TGTAGTGGTGGAAACTGCTAC	GTCCATACTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCGGGACGTGTAGTGGTGGAAACTGCTACGTCCATACTCTTGATATC	ARDPGTCSGGNCYVHTLDI	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	222	25	0	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  S  V  T  S  N  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10638  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGGTTCAGCGTCACCAGCAACTCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.9% (222/247)  IGHV3-53*01  47   ....................G...............C.....GT.......A.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  A  V  I  Y  G  G  G  T  T  R  Y  T  D  S  V  K  G  R  F  T  V  S  R  D  N  F  N  
                    Query_10638  91   AGTGGGTAGCTGTTATTTATGGCGGCGGCACAACACGCTACACAGACTCCGTGAAGGGCCGATTCACCGTTTCCAGAGACAATTTCAACA  180
V  89.9% (222/247)  IGHV3-53*01  137  .......CT.A.........A....T..T.GC...TA....G..........................A.C.............C...G.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------CDR3-IM
                                      N  T  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  P  G  T  C  S  G  G  
                    Query_10638  181  ACACGCTGCATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTCTATTATTGTGCGAGAGATCCCGGGACGTGTAGTGGTGGAA  270
V  89.9% (222/247)  IGHV3-53*01  227  ........T......................................G.G.....C...........-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  90.5% (19/21)    IGHD2-15*01  8    -----------------------------------------------------------------------------...........T.  20

                                      GT----------------------->                                  
                                      N  C  Y  V  H  T  L  D  I  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_10638  271  ACTGCTACGTCCATACTCTTGATATCTGGGGCCAAGGGACAAGGGTCACCGTCTCTTCAG  330
D  90.5% (19/21)    IGHD2-15*01  21   G.......----------------------------------------------------  28
J  97.6% (41/42)    IGHJ3*02     9    ------------------........................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_68844

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           327     8e-92
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTAGA	N/A	N/A	G	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGACTATTCCTTCGCTATAGACGTC	TRDYSFAIDV	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	11	1	0	91.7
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	128	30	27	3	0	90
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	237	223	14	0	94.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  V  S  G  F  D  F  S  A  S  A  M  N  W  V  R  Q  A  S  G  K  G  L  E  W  V  G  H  I 
                    Query_10639  12   TGTGCAGTCTCTGGGTTCGACTTCAGTGCCTCTGCTATGAACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCATATT  101
V  94.1% (223/237)  IGHV3-73*01  64   .......C..........AC........G..........C.............................................G....  153
                                       C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  E  W  V  G  R  I 

                                      --------CDR2-IMGT---------><----------------------------------------------------FR3-IMGT--
                                       R  S  K  A  H  R  Y  A  T  T  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  E  S  K  N  T  A 
                    Query_10639  102  AGAAGCAAAGCTCACCGTTACGCGACTACATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATGAATCAAAGAACACGGCG  191
V  94.1% (223/237)  IGHV3-73*01  154  ............A..A..........AG..............................................T...............  243
                                       R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  A 

                                      --------------------------------------------------><----------CDR3-IMGT--------->         
                                       Y  L  Q  M  N  G  L  K  T  E  D  T  A  M  Y  Y  C  T  R  D  Y  S  F  A  I  D  V  W  G  Q 
                    Query_10639  192  TATCTGCAAATGAACGGCCTGAAGACCGAGGACACGGCCATGTATTACTGTACTAGAGACTATTCCTTCGCTATAGACGTCTGGGGCCAA  281
V  94.1% (223/237)  IGHV3-73*01  244  ...............A.......A...............G.................---------------------------------  300
                                       Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                                  
J  91.1% (51/56)    IGHJ6*02     7    ----------------------------------------------------------....C.A..A..G...G...............  38

                                                              
                                       G  T  T  V  T  V  S  S 
                    Query_10639  282  GGGACCACGGTCACCGTCTCCTCA  305
J  91.1% (51/56)    IGHJ6*02     39   ........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_68845

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            414     5e-118
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CACA	TACTATCCTTCGGGGAGTT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATACTATCCTTCGGGGAGTTTACTACGGTATGGACGTC	ARAHTILRGVYYGMDV	273	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	30	0	0	100
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	24	3	0	88.9
FR3-IMGT	159	272	114	112	2	0	98.2
CDR3-IMGT (germline)	273	279	7	6	1	0	85.7
Total	N/A	N/A	279	272	7	0	97.5


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  M  S  G  D  S  V  S  S  N  S  A  A  W  N  W  
                    Query_10640  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATGTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGA  90
V  97.5% (272/279)  IGHV6-1*01   26   ..............................................C...........................................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  R  W  Y  T  D  Y  A  V  S  V  K  
                    Query_10640  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCGAGGTGGTATACTGATTATGCAGTCTCTGTGAAAA  180
V  97.5% (272/279)  IGHV6-1*01   116  .......................................................C.A........A............A..........  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_10640  181  GTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTCTATTACT  270
V  97.5% (272/279)  IGHV6-1*01   206  ..................................................................................G.......  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-------------------CDR3-IMGT------------------>                                 
                                      C  A  R  A  H  T  I  L  R  G  V  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10640  271  GTGCGAGAGCACATACTATCCTTCGGGGAGTTTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  353
V  97.5% (272/279)  IGHV6-1*01   296  ....A....--------------------------------------------------------------------------  304
                                      C  A  R                                                                            
D  89.5% (17/19)    IGHD3-10*01  5    -------------......GG...........---------------------------------------------------  23
J  100.0% (51/51)   IGHJ6*02     12   --------------------------------...................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_68846

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           400     9e-114
IGHD4-17*01                                                                                           18.0    0.68  
IGHJ6*01                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAG	CTACGGTGA	GTCCGAGTACTTTCTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTCCTACGGTATGGACGTC	ARDLATVSPSTFSYGMDV	290	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	70	5	0	93.3
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	106	8	0	93
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	296	276	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  T 
                    Query_10641  2    CAGATGCAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCTGGGGCCTCAGTAAAGGTCTCCTGCAAGTCTTCTGGTTACACCTTTACC  91
V  93.2% (276/296)  IGHV1-18*04  1    ...G.T....................T..........................G...............G....................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y 
                    Query_10641  92   AGTTACGGTATCACTTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTAT  181
V  93.2% (276/296)  IGHV1-18*04  91   ..C..........GC........A..............A................................C......A...........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  G  S  D  D 
                    Query_10641  182  GCACAGATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGGGATCTGACGAC  271
V  93.2% (276/296)  IGHV1-18*04  181  .......A.C...A..G.................C....................C..........C...........A...........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  T  F  S  Y  G  M  D  V  W  G  Q  G  T  T 
                    Query_10641  272  ACGGCCGTGTATTACTGTGCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTCCTACGGTATGGACGTCTGGGGTCAAGGGACCACG  361
V  93.2% (276/296)  IGHV1-18*04  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------------.........--------------------------------------------------  12
J  98.0% (49/50)    IGHJ6*01     14   --------------------------------------------------------.....................G............  47

                                                      
                                       V  T  V  S  S  
                    Query_10641  362  GTCACCGTCTCCTCAG  377
J  98.0% (49/50)    IGHJ6*01     48   ................  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_68847

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD6-19*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	261	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	20	1	0	95.2
FR3-IMGT	147	260	114	107	7	0	93.9
CDR3-IMGT (germline)	261	267	7	6	1	0	85.7
Total	N/A	N/A	267	250	17	0	93.6


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  
                    Query_10642  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACTTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGC  90
V  93.6% (250/267)  IGHV4-59*01  26   ................T....................C........................AG....T..............A......  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  
                    Query_10642  91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCA  180
V  93.6% (250/267)  IGHV4-59*01  116  .................................AT...T...................................A...............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  
                    Query_10642  181  TATCAGTGGACACGTCCAAGAATCAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTA  270
V  93.6% (250/267)  IGHV4-59*01  206  .......A..............C...................G...........................G..T..C...G......---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -CDR3-IMGT--------->                                  
                                      S  G  W  L  A  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10642  271  GTGGGTGGCTGGCTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (8/8)     IGHD6-19*01  11   ----........------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    -------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_292411

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           353     9e-100
IGHD2-15*01                                                                                           14.1    8.3   
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGCCCGCTGCCC	GTGGTGG	GTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATCAGCCCGCTGCCCGTGGTGGGTGCTTTGACTAC	ARDQPAARGGCFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  H  W  M  H  W  V  R  Q  G  P  G  K  G  L  
                    Query_10643  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGGTCACTGGATGCACTGGGTCCGCCAAGGTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-74*01  47   ............................................A.CT........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  T  V  G  S  G  I  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  G  
                    Query_10643  91   TGTGGGTCTCACGCATTAATACTGTTGGGAGTGGCATAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  95.2% (238/250)  IGHV3-74*01  137  .............T.......G..A.......A...C..................................................C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Q  P  A  A  R  G  
                    Query_10643  181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCAAGAGATCAGCCCGCTGCCCGTGGTG  270
V  95.2% (238/250)  IGHV3-74*01  227  .......G..................................................C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-15*01  12   ------------------------------------------------------------------------------------......  17

                                      ------------->                                  
                                      G  C  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10643  271  GGTGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (7/7)     IGHD2-15*01  18   .-----------------------------------------------  18
J  100.0% (44/44)   IGHJ4*02     5    ----............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_56881

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           382     4e-108
IGHD3-10*01                                                                                           12.2    35    
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCCAGC	GGGAGT	GAAAAGTTAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGCAGATCCAGCGGGAGTGAAAAGTTAATTGACTCT	GRSSGSEKLIDS	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	4	2	0	66.7
Total	N/A	N/A	288	266	22	0	92.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  E  A  S  G  Y  T  F  S  N  Y 
                    Query_10644  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAAGTCTCCTGCGAGGCTTCTGGTTACACCTTTAGCAACTAC  91
V  92.4% (266/288)  IGHV1-18*04  7    ..................................................G.........A.....................C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       E  I  S  W  V  R  Q  A  R  G  Q  G  L  E  W  M  G  C  I  S  G  Y  S  G  D  T  E  Y  A  Y 
                    Query_10644  92   GAAATCAGCTGGGTGCGACAGGCCCGTGGACAAGGGCTTGAGTGGATGGGATGCATCAGCGGTTACAGTGGTGACACAGAGTATGCATAC  181
V  92.4% (266/288)  IGHV1-18*04  97   .GT......................C...........................G.......C.....A....A.....A.C......C.G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       Q  F  R  G  R  V  T  M  T  T  D  T  S  A  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10644  182  CAATTCCGGGGCAGAGTCACCATGACCACAGACACATCCGCGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.4% (266/288)  IGHV1-18*04  187  A.GC...A...............................A..................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  G  R  S  S  G  S  E  K  L  I  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10644  272  GTGTATTACTGTGGCAGATCCAGCGGGAGTGAAAAGTTAATTGACTCTTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  353
V  92.4% (266/288)  IGHV1-18*04  277  .............CG...----------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD3-10*01  17   ------------------------......----------------------------------------------------  22
J  92.9% (39/42)    IGHJ4*02     7    ----------------------------------------......AC...........A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_292413

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCCGTTG	ATTACTATGAAAGTACTTGTTATT	CT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGTTGATTACTATGAAAGTACTTGTTATTCTTAC	ARAVDYYESTCYSY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  R  I  S  C  R  V  S  G  D  M  F  G  S  Y
                    Query_10645  1    GCAGCTGGTGCAGTCTGGAGCAGAGCTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGTTTCTGGAGACATGTTCGGCAGTTA  90
V  92.4% (267/289)  IGHV5-51*01  6    .........................G........................A...........A..G.......T...GC..TAC...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_10645  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGCAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  92.4% (267/289)  IGHV5-51*01  96   ........G.....................G...........................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  R  V  T  F  S  V  D  T  S  L  S  T  A  Y  V  Q  W  S  S  L  K  P  S  D  T  A
                    Query_10645  181  GTCGTTCCAAGGCCGGGTCACCTTCTCAGTCGACACGTCCCTCAGCACCGCCTACGTGCAGTGGAGCAGCCTGAAGCCCTCGGACACCGC  270
V  92.4% (267/289)  IGHV5-51*01  186  ...C..........A.......A......C.....A....A..............C....................G.............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  A  V  D  Y  Y  E  S  T  C  Y  S  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_10645  271  CATATATTACTGTGCGAGAGCCGTTGATTACTATGAAAGTACTTGTTATTCTTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  359
V  92.4% (267/289)  IGHV5-51*01  276  ...G...............----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  87.5% (21/24)    IGHD3-22*01  3    --------------------------..........T....G.G......---------------------------------------  26
J  97.3% (36/37)    IGHJ4*02     12   ----------------------------------------------------........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_292412

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD3-16*01                                                                                           10.3    117  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGG	GGTAAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGGTAATTACTACTACGCTTTGGACGTC	ARGGGNYYYALDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10646  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCTTCCATAACTAATTATTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.0% (222/244)  IGHV4-59*01  49   ...............................GC.....C.G..G...C........C........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  F  Y  S  G  I  T  S  Y  T  P  S  L  Q  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_10646  91   TGGATTGGCTATATGTTTTACAGTGGGATCACCAGCTACACCCCCTCCCTCCAGAGTCGAGTCACCATGTCAGTCGACACGTCCAAGAAG  180
V  91.0% (222/244)  IGHV4-59*01  139  ........G.....C.A...........G.....A.....A..........A................A.....A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  I  S  L  E  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  N  Y  Y  Y  A  L 
                    Query_10646  181  CAGATCTCCCTGGAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGGGGGGGGTAATTACTACTACGCTTTG  270
V  91.0% (222/244)  IGHV4-59*01  229  ...T........A......G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   ----------------------------------------------------------------.....---------------------  22
J  94.4% (51/54)    IGHJ6*02     9    ---------------------------------------------------------------------------..........G.A..  23

                                      ----->                                 
                                       D  V  W  D  Q  G  T  T  V  T  V  S  S 
                    Query_10646  271  GACGTCTGGGACCAAGGGACCACGGTCACCGTCTCCTCA  309
J  94.4% (51/54)    IGHJ6*02     24   ..........G............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_292415

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           307     1e-85
IGHD1-1*01                                                                                            12.2    34   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCAGGAT	GTACAA	GTGCCAGGTGATCTGCGGATA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAGATCAGGATGTACAAGTGCCAGGTGATCTGCGGATATACTTCTACGGTTTGGACGTC	AADQDVQVPGDLRIYFYGLDV	246	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	253	8	6	2	0	75
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  A  T  D  L  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_10647  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCGTCGCCACTGATCTTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  89.2% (223/250)  IGHV4-61*01  50   .....TCC...A....C.....................AG..G..G.AG.........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  L  Y  Y  N  G  V  T  N  Y  N  P  P  L  K  S  R  V  T  I  S  R  D  S  S  
                    Query_10647  94   TGGAGTGGATTGGATATCTCTATTACAATGGGGTCACCAACTACAACCCCCCCCTCAAGAGTCGAGTCACCATATCAAGAGACTCGTCCA  183
V  89.2% (223/250)  IGHV4-61*01  140  .............G...A.........G....AG................T..........................GT....A......  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  Q  F  S  L  K  M  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  A  D  Q  D  V  Q  V  P  
                    Query_10647  184  AGAACCAGTTCTCCCTGAAGATGAACTCTGTGACCGCTGCGGACTCGGCCGTATATTATTGTGCGGCAGATCAGGATGTACAAGTGCCAG  273
V  89.2% (223/250)  IGHV4-61*01  230  ....................C...G...................A.......G.....C......AG...--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-1*01   2    -----------------------------------------------------------------------------......-------  7

                                      DR3-IMGT-------------------------->                                 
                                      G  D  L  R  I  Y  F  Y  G  L  D  V  W  G  L  G  T  T  V  T  V  S  S 
                    Query_10647  274  GTGATCTGCGGATATACTTCTACGGTTTGGACGTCTGGGGCCTAGGGACCACGGTCACCGTCTCCTCA  341
J  94.4% (51/54)    IGHJ6*02     9    --------------....A.......A...............A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_292417

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           355     3e-100
IGHD1-26*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTCCGGAG	GTGGGAGCTACT	CGTGGTCCTTTTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCGGAGGTGGGAGCTACTCGTGGTCCTTTTCCTAC	ARGSGGGSYSWSFSY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10648  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGCTTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-21*01  47   .............................................G.......A...A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  S  S  S  S  Y  M  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10648  91   AGTGGGTCTCATCCATTACTAGTAGTAGTAGTTACATGAACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (238/249)  IGHV3-21*01  137  ..................G..................AT...................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  S  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  G  S  G  G  G  S  Y  
                    Query_10648  181  AGAGCTCCCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTTCTGTGCGAGAGGGTCCGGAGGTGGGAGCTACT  270
V  95.6% (238/249)  IGHV3-21*01  227  ...A...A....A.......................................G....A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD1-26*01  7    ------------------------------------------------------------------------------............  18

                                      ---------------->                                  
                                      S  W  S  F  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10648  271  CGTGGTCCTTTTCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (38/38)   IGHJ4*02     11   -------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_292416

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           352     3e-99
IGHD6-6*01                                                                                            10.3    123  
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTCCGAAAC	CGTCC	GG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTCTCCGAAACCGTCCGGACTACTACTACCCTATGGACGTC	TRGLRNRPDYYYPMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_10649  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGACCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-11*01  47   .........................................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  N  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_10649  91   AGTGGGTTTCATATATCAGTAGTAGTGGTAATTACATCTACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAGCGCCA  180
V  95.2% (237/249)  IGHV3-11*01  137  .............C..T.............G.AC...A..............................................A.....  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  F  L  Q  M  I  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  G  L  R  N  R  P  D  
                    Query_10649  181  AGAACTCACTGTTTCTGCAAATGATCAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTACGAGAGGTCTCCGAAACCGTCCGGACT  270
V  95.2% (237/249)  IGHV3-11*01  227  ............A...........A...........................G.........G......---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD6-6*01   14   --------------------------------------------------------------------------------.....-----  18
J  96.4% (54/56)    IGHJ6*02     7    ---------------------------------------------------------------------------------------...  9

                                      T------------------>                                 
                                      Y  Y  Y  P  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10649  271  ACTACTACCCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.4% (54/56)    IGHJ6*02     10   ........GG...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_193790

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACGGCGG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACGGCGGAACTGGTTCGACCCC	ARGGWRRRRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	219	26	0	89.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  F  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_10650  1    ACCCTGTCCCTCACCTGCGCTGTGTTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  89.4% (219/245)  IGHV4-34*01  49   .......................C.A..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  T  R  Y  N  P  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_10650  91   TGGATTGGGGAAATCAGTCATAGTGGAAGTACGAGGTACAACCCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAG  180
V  89.4% (219/245)  IGHV4-34*01  139  ................A............C..C.AC.........T......A...............A....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  I  Y  Y  C  A  R  G  G  W  R  R  R  R  N  W 
                    Query_10650  181  CAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTATATATTACTGTGCGCGAGGGGGCTGGCGAAGACGGCGGAACTGG  270
V  89.4% (219/245)  IGHV4-34*01  229  ..GT...........C..A......T...................G.G............A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10650  271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (48/49)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_193791

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10651  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  G  N  A  
                    Query_10651  91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGGCAACGCCA  180
V  92.0% (230/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A.........................................A........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_10651  181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.0% (230/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10651  271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_193793

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           382     3e-108
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTTGTGG	TACTCTGGTTCGGGGAGT	AAACCCCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTTGTGGTACTCTGGTTCGGGGAGTAAACCCCATTTTGACTCC	ARGLWYSGSGSKPHFDS	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_10652  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (247/250)  IGHV4-31*03  49   .............................................................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10652  91   CTGGAGTGGATTGGGTACATTTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (247/250)  IGHV4-31*03  139  ....................C.....................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  W  Y  S  G  S 
                    Query_10652  181  AAGAACCAGTTCTCCCTGAAGCTGCGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGTTTGTGGTACTCTGGTTCG  270
V  98.8% (247/250)  IGHV4-31*03  229  ........................A.............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  5    ------------------------------------------------------------------------------....A.......  16

                                      MGT-------------------->                                  
                                       G  S  K  P  H  F  D  S  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_10652  271  GGGAGTAAACCCCATTTTGACTCCTGGGGCCAGGGCACCCTGGTCACCGTCCCCTCAG  328
D  94.4% (17/18)    IGHD3-10*01  17   ......----------------------------------------------------  22
J  93.0% (40/43)    IGHJ4*02     6    ---------------.......A............A...............T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_48749

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           416     2e-118
IGHD7-27*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	TCTGGGA	AACTGGGG	TAGGA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATCTGGGAAACTGGGGTAGGAGACTAC	AIWETGVGDY	289	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	292	4	4	0	0	100
Total	N/A	N/A	292	279	13	0	95.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  R  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  R 
                    Query_10653  1    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGG  90
V  95.5% (279/292)  IGHV1-69*12  1    ...........G...........G.............A...................................................C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  G  I  I  P  L  F  R  T  P  N  Y 
                    Query_10653  91   AGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGAGGGATCATCCCTCTCTTTCGGACACCAAACTAC  180
V  95.5% (279/292)  IGHV1-69*12  91   ...................................................A.................A.....G.T...G........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  D  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  Q  L  S  S  L  R  S  E  D 
                    Query_10653  181  GCACAGAAGTTCCAGGACAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGCAACTGAGCAGCCTGAGATCTGAGGAC  270
V  95.5% (279/292)  IGHV1-69*12  181  ................G..............................................G.G........................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------CDR3-IMGT--------->                                  
                                       T  A  V  Y  Y  C  A  I  W  E  T  G  V  G  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_10653  271  ACGGCCGTATATTACTGTGCGATCTGGGAAACTGGGGTAGGAGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  352
V  95.5% (279/292)  IGHV1-69*12  271  ........G.............------------------------------------------------------------  292
                                       T  A  V  Y  Y  C  A                                                              
D  100.0% (8/8)     IGHD7-27*01  3    -----------------------------........---------------------------------------------  10
J  97.5% (39/40)    IGHJ4*02     9    ------------------------------------------...........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_193795

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            352     3e-99
IGHD1-26*01                                                                                           12.2    36   
IGHJ3*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	N/A	GGGAGC	CGACATAGCACAAATGGAGCATTGACAGGGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGGAGCCGACATAGCACAAATGGAGCATTGACAGGGAATGCTTTCCATATC	AGSRHSTNGALTGNAFHI	273	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	80	30	29	1	0	96.7
FR2-IMGT	81	131	51	47	4	0	92.2
CDR2-IMGT	132	158	27	22	5	0	81.5
FR3-IMGT	159	272	114	101	13	0	88.6
CDR3-IMGT (germline)	273	275	3	3	0	0	100
Total	N/A	N/A	275	250	25	0	90.9


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  V  V  S  G  D  S  V  S  S  N  S  A  A  W  G  W  
                    Query_10654  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGTCGTCTCCGGGGACAGTGTCTCTAGCAACAGCGCTGCTTGGGGCTGGA  90
V  90.9% (250/275)  IGHV6-1*01   26   ..........................................C.A............................T.........AA.....  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  A  R  T  Y  Y  T  S  Q  W  I  H  D  Y  E  D  S  V  K  
                    Query_10654  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGCTAGGACATACTACACGTCCCAGTGGATTCATGATTATGAAGATTCTGTGAAAA  180
V  90.9% (250/275)  IGHV6-1*01   116  ....................................GA.............G....A.....TA.A.........C..TA..........  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  N  V  N  A  D  T  S  K  N  Q  I  S  L  Q  L  T  S  V  T  P  E  D  T  A  M  Y  F  
                    Query_10654  181  GTCGAATAAATGTCAACGCAGACACATCCAAGAACCAGATCTCCCTGCAGTTGACCTCTGTGACTCCCGAGGACACGGCTATGTACTTCT  270
V  90.9% (250/275)  IGHV6-1*01   206  .........CCA.....C....................T...........C...A.........................G....T.A..  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------------------CDR3-IMGT--------------------->                                  
                                      C  A  G  S  R  H  S  T  N  G  A  L  T  G  N  A  F  H  I  W  G  Q  G  T  V  V  P  V  S  S  
                    Query_10654  271  GTGCAGGGAGCCGACATAGCACAAATGGAGCATTGACAGGGAATGCTTTCCATATCTGGGGCCAAGGGACAGTGGTCCCCGTGTCTTCAG  360
V  90.9% (250/275)  IGHV6-1*01   296  .....-------------------------------------------------------------------------------------  300
                                      C  A                                                                                      
D  100.0% (6/6)     IGHD1-26*01  9    -----......-------------------------------------------------------------------------------  14
J  89.6% (43/48)    IGHJ3*02     3    ------------------------------------------.......TG....................A.....A....C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_193796

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     2e-95
IGHD3-10*01                                                                                           10.3    118  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_10655  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-21*01  47   ............................................AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  E  Y  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_10655  91   AGTGGGTCTCATCCATTAGTAGTACTAGTGAATACATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  93.6% (233/249)  IGHV3-21*01  137  ........................G....AGT........C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_10655  181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTT  270
V  93.6% (233/249)  IGHV3-21*01  227  ............A......A..............................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10655  271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_193797

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     4e-95
IGHD6-13*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TA	ATAGCAGC	CCAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAATAGCAGCCCAGACTACGGTATGGACGTC	ARDNSSPDYGMDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10656  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGCAGCTATGGCATGAGCTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-23*01  47   ....................................C..............C.....................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  I  N  G  I  G  S  S  T  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_10656  91   AGTGGGTCTCACTTATTAATGGTATCGGAAGTAGCACGCACTACGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  ...........GC.....G.....GT..TG.......AT.........................G......A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  N  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  N  S  S  P  D  Y  
                    Query_10656  181  AGAACACGCTGAATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTATATTACTGTGCGAGAGATAATAGCAGCCCAGACTACG  270
V  93.2% (233/250)  IGHV3-23*01  227  ...........T........................C.............................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD6-13*01  5    ------------------------------------------------------------------------........----------  12
J  100.0% (50/50)   IGHJ6*02     13   ------------------------------------------------------------------------------------......  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10656  271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (50/50)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_193798

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	GGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACGGGACACCCTTTTGACTCC	ARDPAVVVQWVAGTGHPFDS	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10657  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  A  I  S  R  D  N  A  
                    Query_10657  91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCGCCATCTCCAGAGACAACGCCA  180
V  92.0% (230/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A............................A.....................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_10657  181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.0% (230/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  S  W  G  Q  G  T  L  V  T  L  S  S  
                    Query_10657  271  GGGTGGCTGGTACGGGACACCCTTTTGACTCCTGGGGCCAGGGAACCCTTGTCACCCTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  93.0% (40/43)    IGHJ4*02     6    -----------------------.......A..................G......G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_48744

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           406     1e-115
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGGCA	AGTACCAGCTGCT	CAACCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGGCAAGTACCAGCTGCTCAACCCTGACTAC	ARAGKYQLLNPDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N  N  Y
                    Query_10658  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAACAACTA  90
V  94.8% (275/290)  IGHV1-69*01  6    ..................G................................................................G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  C  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  S  V  F  G  T  T  N  Y  A  Q
                    Query_10658  91   TGCTATCTGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCAGTGTCTTTGGTACAACAAACTACGCACA  180
V  94.8% (275/290)  IGHV1-69*01  96   .......A.....................................................CC.A...........G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  A  Y  M  E  L  S  S  L  T  S  E  D  T  A
                    Query_10658  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGCGCACAGCCTACATGGAGCTGAGTAGTCTGACATCTGAGGACACGGC  270
V  94.8% (275/290)  IGHV1-69*01  186  ...........................................A......................C..C....G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        L  Y  Y  W  A  R  A  G  K  Y  Q  L  L  N  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10658  271  CCTTTATTACTGGGCGAGAGCCGGCAAGTACCAGCTGCTCAACCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  94.8% (275/290)  IGHV1-69*01  276  .G.G........T.......------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (13/13)   IGHD2-2*01   14   --------------------------.............-----------------------------------------------  26
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_48747

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            422     2e-120
IGHD3-22*01                                                                                           18.0    0.67  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGACGATTTT	TATGATAATAGT	TATTCCTTTGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGACGATTTTTATGATAATAGTTATTCCTTTGGCTTTGACTAC	ARADDFYDNSYSFGFDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_10659  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCGGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  96.6% (280/290)  IGHV1-2*04   6    ....................................T.....................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  H  W  V  R  Q  A  P  G  H  G  L  E  W  M  G  W  I  N  A  N  S  G  G  T  N  Y  A  Q
                    Query_10659  91   CTATATACATTGGGTGCGACAGGCCCCTGGACACGGGCTAGAGTGGATGGGATGGATCAACGCTAACAGTGGTGGCACAAACTATGCACA  180
V  96.6% (280/290)  IGHV1-2*04   96   ......G..C.......................A.....T.....................C............................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  Q  A  W  V  T  L  T  R  D  T  S  T  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_10659  181  GAACTTTCAGGCCTGGGTCACCCTGACCAGGGACACGTCCACCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  96.6% (280/290)  IGHV1-2*04   186  ...G.......G..........A..................T................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  A  D  D  F  Y  D  N  S  Y  S  F  G  F  D  Y  W  G  Q  G  T  L  V  T  A
                    Query_10659  271  CGTGTATTACTGTGCGAGAGCGGACGATTTTTATGATAATAGTTATTCCTTTGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGC  360
V  96.6% (280/290)  IGHV1-2*04   276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD3-22*01  8    -------------------------------.......G....-----------------------------------------------  19
J  97.7% (43/44)    IGHJ4*02     5    ------------------------------------------------------...................................T  40

                                              
                                        S  S  
                    Query_10659  361  CTCCTCAG  368
J  97.7% (43/44)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_313885

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD1-26*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCATACGCC	GTGGGAG	GAAGGGATCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATACGCCGTGGGAGGAAGGGATCCCCTTTGACTAC	AKDHTPWEEGIPFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  L  S  R  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10660  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCATGCTTAGCAGATTTGCCATGAGTTGGGTCCGCCAGGCCCCTGGGAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-23*01  47   ............................T.......CCT.......C.A.........C..............T..A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  D  N  T  Y  Y  A  D  S  L  K  G  Q  F  S  I  S  R  D  S  S  
                    Query_10660  91   AGTGGGTCTCAGGTATCAGCGGAAGTGGTGATAACACATATTATGCAGACTCCTTGAAGGGCCAGTTCTCCATCTCCAGAGACAGTTCCA  180
V  91.2% (228/250)  IGHV3-23*01  137  ............C...T..T..T.......G..G......C..C.........G.........G....A...............A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  H  T  P  W  E  E  
                    Query_10660  181  AGAACACGCTGTATCTGCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCATACGCCGTGGGAGGAAG  270
V  91.2% (228/250)  IGHV3-23*01  227  ......................G...............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD1-26*01  7    -------------------------------------------------------------------------------.......----  13

                                      ---------------->                                  
                                      G  I  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10660  271  GGATCCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (44/44)   IGHJ4*02     5    -------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_48741

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            350     8e-99
IGHD6-6*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              104     1e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGG	GTATAGCAGCTCG	ATCGTTA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTATAGCAGCTCGATCGTTATACTACTACGGTATGGACGTC	ARGGIAARSLYYYGMDV	239	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	24	0	0	100
FR3-IMGT	125	238	114	111	3	0	97.4
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	232	228	4	0	98.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  R  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 
                    Query_10661  14   TGTGCAGCCTCTAGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATA  103
V  98.3% (228/232)  IGHV3-7*01   64   ............G.............................................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       K  Q  D  G  S  E  K  Y  N  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_10661  104  AAGCAAGATGGAAGTGAGAAATACAATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTG  193
V  98.3% (228/232)  IGHV3-7*01   154  ........................T.................................................................  243
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><--------------------CDR3-IMGT---------------
                                       Q  M  N  S  L  R  V  G  D  T  A  V  Y  Y  C  A  R  G  G  I  A  A  R  S  L  Y  Y  Y  G  M 
                    Query_10661  194  CAAATGAACAGCCTGAGAGTCGGGGACACGGCTGTGTATTACTGTGCGAGAGGGGGTATAGCAGCTCGATCGTTATACTACTACGGTATG  283
V  98.3% (228/232)  IGHV3-7*01   244  ...................C..A.............................--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (13/13)   IGHD6-6*01   3    -------------------------------------------------------.............----------------------  15
J  100.0% (54/54)   IGHJ6*02     9    ---------------------------------------------------------------------------...............  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10661  284  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  322
J  100.0% (54/54)   IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_313883

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            319     2e-89
IGHD3-3*01                                                                                            12.2    31   
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGGACCTGGCAGGGGATTCTT	GATTTT	N/A	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATGGGACCTGGCAGGGGATTCTTGATTTT	ARDGTWQGILDF	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  L  V  S  G  F  S  L  S  D  Y  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10662  1    GGTCCCTGAGACTCTCCTGTCTAGTCTCTGGATTCAGTTTGAGTGATTATTATATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-7*03   47   ....................GC..C...........CC..T...AGC....GG....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  R  D  G  S  G  R  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10662  91   AGTGGGTGGCCAACATAAACCGAGATGGAAGTGGGAGATACTATGTGGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  90.8% (227/250)  IGHV3-7*03   137  ...................G.A...........A..A...........................A.........................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  G  T  W  Q  G  I  
                    Query_10662  181  AGAACTCACTGTTTCTGCAAATGAACAGCCTCAGAGTCGAAGATACGGCCGTGTATTACTGTGCGCGAGATGGGACCTGGCAGGGGATTC  270
V  90.8% (227/250)  IGHV3-7*03   227  ............A..................G....C...G..C.....................A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ------->                                  
                                      L  D  F  W  G  Q  G  A  L  V  S  V  S  S  
                    Query_10662  271  TTGATTTTTGGGGCCAGGGAGCCCTGGTCAGCGTCTCCTCAG  312
D  100.0% (6/6)     IGHD3-3*01   8    --......----------------------------------  13
J  94.1% (32/34)    IGHJ4*02     15   --------............A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_48743

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD1-26*01                                                                                           10.3    113  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCGGAAGAA	GGGAG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGGAAGAAGGGAGATTGACTAC	AGGRREIDY	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	225	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  N  H  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10663  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTAATCACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.8% (225/240)  IGHV4-59*01  49   ........................................G..G.T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  D  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10663  91   TGGATTGGGTATCTTTATTACGATGGTGACACCAAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  93.8% (225/240)  IGHV4-59*01  139  ............A.C......AG...GAG......C......................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  G  R  R  E  I  D  Y  W  G 
                    Query_10663  181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGGGCGGAAGAAGGGAGATTGACTACTGGGGC  270
V  93.8% (225/240)  IGHV4-59*01  229  ...............C...............................G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  9    ----------------------------------------------------------------------.....---------------  13
J  100.0% (42/42)   IGHJ4*02     7    ----------------------------------------------------------------------------..............  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_10663  271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  100.0% (42/42)   IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_345662

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           285     4e-79
IGHD4-4*01                                                                                            18.0    0.56 
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTAT	TACAGTAAC	CTTGAGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTATTACAGTAACCTTGAGGAC	AREYYSNLED	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	216	34	0	86.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  G  D  H  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10664  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTCGGCGACCACTACATGAGTTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  86.4% (216/250)  IGHV3-11*06  47   ....................................CC...A.T...T..........C...A.............A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  T  I  S  F  I  S  H  T  G  D  Y  T  R  Y  R  D  P  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_10664  91   AGACAATTTCATTCATCAGTCACACTGGTGATTACACAAGGTATAGAGACCCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  86.4% (216/250)  IGHV3-11*06  137  ..TGGG......A...T...AGT.G.A..AG........AC..CGC....T......A................................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  S  S  L  K  V  E  D  T  A  V  Y  Y  C  A  R  E  Y  Y  S  N  L  E  
                    Query_10664  181  AGAATTCACTGTATCTGCAAATGAGCAGCCTGAAAGTCGAGGACACGGCTGTCTACTACTGTGCGAGAGAGTATTACAGTAACCTTGAGG  270
V  86.4% (216/250)  IGHV3-11*06  227  ....C...................A........G..C...............G..T..............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD4-4*01   5    --------------------------------------------------------------------------.........-------  13

                                      ->                                  
                                      D  W  G  Q  G  T  L  V  I  V  S  A  
                    Query_10664  271  ACTGGGGCCAGGGAACCCTGGTCATCGTCTCCGCAG  306
J  94.4% (34/36)    IGHJ4*02     13   ........................C.......T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_226540

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           325     3e-91
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGGA	GGT	TATGATTCGGG	ACTGGGCCAAGGTCCAA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACGGAGGTTATGATTCGGGACTGGGCCAAGGTCCAA	TTEVMIRDWAKVQ	249	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	102	12	0	89.5
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	232	24	0	90.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  P  F  S  N  A  W  M  T  W  V  R  Q  A  P  G  K  G  P  
                    Query_10665  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCCCCTTCAGTAACGCCTGGATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  90.6% (232/256)  IGHV3-15*01  47   .......T.............C.............A.T...................GC............................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  I  D  A  E  T  T  D  Y  A  A  P  V  K  G  G  F  T  I  S  R  D  
                    Query_10665  91   AGTGGGTTGGCCGTATTAAAAGCAAGATTGATGCTGAGACAACAGACTACGCGGCACCCGTTAAAGGCGGATTCACCATCTCAAGAGATG  180
V  90.6% (232/256)  IGHV3-15*01  137  .........................A.C.....G..G...............T........G......A.....................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      D  S  K  N  T  V  H  L  E  M  N  S  L  K  S  D  D  T  A  V  Y  Y  C  T  T  E  V  M  I  R  
                    Query_10665  181  ATTCAAAAAACACGGTACATCTGGAAATGAACAGCCTGAAAAGCGACGACACAGCCGTTTATTATTGCACCACGGAGGTTATGATTCGGG  270
V  90.6% (232/256)  IGHV3-15*01  227  ..............C.GT.....C..................C...G...........G.....C..T.....A..--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  90.9% (10/11)    IGHD3-10*01  8    -------------------------------------------------------------------------------....G......  18

                                      GT-------------->                                
                                      D  W  A  K  V  Q  W  G  Q  G  T  L  F  T  V  S  S
                    Query_10665  271  ACTGGGCCAAGGTCCAATGGGGCCAGGGAACCCTGTTCACCGTCTCCTC  319
J  96.9% (31/32)    IGHJ4*02     15   -----------------..................G.............  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_226541

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD6-19*01                                                                                           21.8    0.040
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	C	ATAGAAGTGGCTGG	CCGTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACATAGAAGTGGCTGGCCGTTTGATGCTTTCGAGATC	ARHRSGWPFDAFEI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  H  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_10666  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATCATCACTACTGGAGCTGGATCCGGCAGTCTCCAGGGAAGGGACTGGAG  90
V  93.8% (228/243)  IGHV4-59*01  49   ........................................G.AG.T.......................C.C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  I  Y  N  P  S  L  E  S  R  V  T  I  S  A  D  T  S  K  K 
                    Query_10666  91   TGGATTGGCTATATCTATTACAGTGGGAGCACCATCTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAG  180
V  93.8% (228/243)  IGHV4-59*01  139  ........G.........................A................A.....................T...............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  A  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  R  S  G  W  P  F  D  A 
                    Query_10666  181  CAGTTCTCCCTGAAGCTGAGCGCTGTAACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGACATAGAAGTGGCTGGCCGTTTGATGCT  270
V  93.8% (228/243)  IGHV4-59*01  229  .....................T....G....................G............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  5    ----------------------------------------------------------------....C.........------------  18
J  88.0% (44/50)    IGHJ3*02     1    -----------------------------------------------------------------------------------.......  7

                                      -------->                                  
                                       F  E  I  W  G  Q  G  I  K  V  S  V  S  S  
                    Query_10666  271  TTCGAGATCTGGGGCCAGGGGATAAAGGTCTCCGTCTCTTCAG  313
J  88.0% (44/50)    IGHJ3*02     8    ..T..T...........A....C..T....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_352195

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         361     4e-102
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ACTTTG	TATGTTAGTAGTGGTGATTAC	CTTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACTTTGTATGTTAGTAGTGGTGATTACCTTAACTACTTTGACTAC	ARTLYVSSGDYLNYFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  V  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10667    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  96.4% (240/249)  IGHV4-30-4*01  49   ..................A............G.................A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  Q  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S 
                    Query_10667    91   CTGCAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGACTTACCATATCAGTAGACACGTCC  180
V  96.4% (240/249)  IGHV4-30-4*01  139  ...G......................................................A.......G.......................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  H  C  A  R  T  L  Y  V  S  S  G 
                    Query_10667    181  AAGAACCAGTTCTCCCTGAAGCTGAGATCTGTGACTGCCGCAGACACGGCCGTGTATCATTGTGCCAGAACTTTGTATGTTAGTAGTGGT  270
V  96.4% (240/249)  IGHV4-30-4*01  229  ..........................C..............................T.C.........---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.5% (19/21)    IGHD3-22*01    8    ---------------------------------------------------------------------------....A..........  22

                                        MGT-------------------->                                  
                                         D  Y  L  N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10667    271  GATTACCTTAACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  90.5% (19/21)    IGHD3-22*01    23   T.....----------------------------------------------------  28
J  100.0% (48/48)   IGHJ4*02       1    ----------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_352194

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           343     2e-96
IGHD3-9*01                                                                                            35.3    4e-06
IGHJ4*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GAATCCCCCCGCGAGTCCC	TACGATATGTTGACTGGATATTAT	CGGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGAATCCCCCCGCGAGTCCCTACGATATGTTGACTGGATATTATCGGTTCTACTTTGACTAC	AKNPPASPYDMLTGYYRFYFDY	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  N  W  V  R  Q  A  P  G  M  G  L  
                    Query_10668  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTACGCCATGAACTGGGTCCGCCAGGCTCCAGGGATGGGGCTGG  90
V  94.3% (233/247)  IGHV3-23*01  47   .............................................G...T.......G.......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  D  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_10668  91   AGTGGGTCTCAGGTATTAGTGACAGTGGTGGAAGCACATATTACGCAGACTCCGTGAAGGGCCGGCTCACCATCTCCAGAGACAATTCCA  180
V  94.3% (233/247)  IGHV3-23*01  137  ............C........GT........T........C........................T........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  S  T  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  N  P  P  A  S  P  Y  
                    Query_10668  181  AGAGCACGCTGTATTTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGAATCCCCCCGCGAGTCCCTACG  270
V  94.3% (233/247)  IGHV3-23*01  227  ...A..........C..C..................................A..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  91.7% (22/24)    IGHD3-9*01   5    --------------------------------------------------------------------------------------....  8

                                      -CDR3-IMGT--------------------------->                                  
                                      D  M  L  T  G  Y  Y  R  F  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10668  271  ATATGTTGACTGGATATTATCGGTTCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  342
D  91.7% (22/24)    IGHD3-9*01   9    ....T........T......----------------------------------------------------  28
J  97.9% (46/47)    IGHJ4*02     2    -------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_226545

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           350     8e-99
IGHD3-3*01                                                                                            21.8    0.042
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCCGC	ACGTTTTTTGGAGT	CATTAGAGTAATC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCCGCACGTTTTTTGGAGTCATTAGAGTAATCGATGCTTTTGATATC	AGRTFFGVIRVIDAFDI	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	235	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  M  S  R  G  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_10669  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATGAGTAGGGGTGGTTACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGG  90
V  95.5% (235/246)  IGHV4-39*01  49   ...................C..................C..C..TA..A......................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  S  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  G  V  T  I  S  V  D  T  S 
                    Query_10669  91   CTGGAGTGGATTGGGAGTAGTTATTATAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTGGAGTCACCATATCCGTAGACACGTCC  180
V  95.5% (235/246)  IGHV4-39*01  139  ...................TC.............G............................C..........................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  R  T  F  F  G  V  I 
                    Query_10669  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGGGCCGCACGTTTTTTGGAGTCATT  270
V  95.5% (235/246)  IGHV4-39*01  229  ..................................................................------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  92.9% (13/14)    IGHD3-3*01   6    ------------------------------------------------------------------------...A..........----  19

                                      MGT-------------------->                                  
                                       R  V  I  D  A  F  D  I  W  G  Q  G  T  K  V  I  V  S  S  
                    Query_10669  271  AGAGTAATCGATGCTTTTGATATCTGGGGCCAAGGGACAAAGGTCATCGTCTCTTCAG  328
J  95.9% (47/49)    IGHJ3*02     2    ---------...............................T.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_226546

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           357     1e-100
IGHD3-22*01                                                                                           14.1    8.4   
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGA	TATGATGGTA	ATGATAAAGC	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGATATGATGGTAATGATAAAGCTGCTTTTGACATC	AREGYDGNDKAAFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10670  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAGATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-48*03  47   ....................................................A.....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  T  T  G  G  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10670  91   AGTGGATTTCATATATTAGTACTACTGGTGGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (239/250)  IGHV3-48*03  137  .....G.......C.......G..G....A............................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  G  Y  D  G  N  D  
                    Query_10670  181  AGAACTCACTATTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTGCGAGAGAGGGATATGATGGTAATGATA  270
V  95.6% (239/250)  IGHV3-48*03  227  ..........G.A.....................................G.......C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-22*01  8    --------------------------------------------------------------------------......A...------  17

                                      ---------------->                                  
                                      K  A  A  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_10670  271  AAGCTGCTTTTGACATCTGGGGCCAAGGGACAATGGTCATCGTCTCTTCAG  321
J  95.7% (45/47)    IGHJ3*02     4    ----.........T.........................C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_352190

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_10671  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.9% (279/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_10671  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_10671  181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  .......C.....................................C...........G......A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_10671  271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.9% (279/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_10671  361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_226548

Length=415
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           444     7e-127
IGHD3-22*01                                                                                           37.2    1e-06 
IGHJ2*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGCCTTGAATTCAAGGT	GTATTACTATGATAGTGATGGTTAT	GAGG	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCGCCTTGAATTCAAGGTGTATTACTATGATAGTGATGGTTATGAGGGGTACTTCGATCTC	ARDRLEFKVYYYDSDGYEGYFDL	291	359	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	75	0	0	100
CDR1-IMGT	78	101	24	24	0	0	100
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	111	3	0	97.4
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	290	6	0	98


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_10672  3    CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACC  92
V  98.0% (290/296)  IGHV1-46*01  1    ..........................................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  N  P  S  G  G  T  T  S  Y 
                    Query_10672  93   AGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGTAATCAACCCTAGTGGTGGGACCACAAGCTAC  182
V  98.0% (290/296)  IGHV1-46*01  91   .........................................................A...................T.G..........  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  T  T  S  T  V  Y  M  D  V  S  S  L  R  S  E  D 
                    Query_10672  183  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGACCACGAGCACAGTCTACATGGACGTGAGCAGCCTGAGATCTGAGGAC  272
V  98.0% (290/296)  IGHV1-46*01  181  ..........................................T......................GC.......................  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------------------CDR3-IMGT----------------------------->   
                                       T  A  V  Y  Y  C  A  R  D  R  L  E  F  K  V  Y  Y  Y  D  S  D  G  Y  E  G  Y  F  D  L  W 
                    Query_10672  273  ACGGCCGTGTATTACTGTGCGAGAGACCGCCTTGAATTCAAGGTGTATTACTATGATAGTGATGGTTATGAGGGGTACTTCGATCTCTGG  362
V  98.0% (290/296)  IGHV1-46*01  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  92.0% (23/25)    IGHD3-22*01  1    --------------------------------------------................AG.......---------------------  25
J  100.0% (48/48)   IGHJ2*01     6    -------------------------------------------------------------------------.................  22

                                                                     
                                       G  R  G  T  L  V  T  V  S  S  
                    Query_10672  363  GGCCGTGGCACCCTGGTCACTGTCTCCTCAG  393
J  100.0% (48/48)   IGHJ2*01     23   ...............................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40709304


Query= Query_226549

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           422     2e-120
IGHD2-15*01                                                                                           16.1    2.4   
IGHJ6*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGC	ATTGTAATGGT	AACAGGTGTTGGGG	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGCATTGTAATGGTAACAGGTGTTGGGGCGTC	ARDRHCNGNRCWGV	281	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	166	21	20	1	0	95.2
FR3-IMGT	167	280	114	110	4	0	96.5
CDR3-IMGT (germline)	281	288	8	8	0	0	100
Total	N/A	N/A	288	279	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  N
                    Query_10673  1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAACAA  90
V  96.9% (279/288)  IGHV3-53*01  6    ..........G...........................................................................G...  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  L  I  Y  S  G  G  T  T  H  Y  A  D  S
                    Query_10673  91   CTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCACTTATTTATAGCGGTGGTACCACACACTACGCAGACTC  180
V  96.9% (279/288)  IGHV3-53*01  96   ........G...........................................G..................G....T.............  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  N  S  R  N  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V
                    Query_10673  181  CGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGT  270
V  96.9% (279/288)  IGHV3-53*01  186  ......................................A...................................C...............  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><----------------CDR3-IMGT--------------->                                 
                                        Y  C  C  A  R  D  R  H  C  N  G  N  R  C  W  G  V  W  G  Q  G  T  P  V  P  V  S  S 
                    Query_10673  271  GTATTGCTGTGCGAGAGATAGGCATTGTAATGGTAACAGGTGTTGGGGCGTCTGGGGCCAAGGGACCCCGGTCCCCGTCTCCTCA  355
V  96.9% (279/288)  IGHV3-53*01  276  .....A............-------------------------------------------------------------------  293
                                        Y  Y  C  A  R                                                                      
D  90.9% (10/11)    IGHD2-15*01  6    -----------------------......G....---------------------------------------------------  16
J  94.6% (35/37)    IGHJ6*02     26   ------------------------------------------------...................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_106426

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           338     5e-95
IGHD1-1*01                                                                                            12.2    33   
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGACGGACCCCTTTAGAGATGGCTTCAATG	GGAACG	TCGGACCG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGACGGACCCCTTTAGAGATGGCTTCAATGGGAACGTCGGACCGTACTTTGACTCC	AGTDPFRDGFNGNVGPYFDS	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  N  Y  C  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10674  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAATTACTGCTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  93.9% (231/246)  IGHV4-31*01  49   ................................................GG.....A......C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  M  S  V  D  T  S 
                    Query_10674  91   CTGGAGTGGATTGGATACATCTATTATAGTGGGAGTACGTACTACAACCCGTCCCTCAAGAGTCTAGTCACCATGTCAGTTGACACGTCT  180
V  93.9% (231/246)  IGHV4-31*01  139  ..............G...........C........C..C.............................T.....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  T  D  P  F  R  D  G 
                    Query_10674  181  AAGAACCAGTTCTCCCTGAAGGTGACCTCTGTGACGGCCGCGGACACGGCCGTGTATTATTGTGCGGGGACGGACCCCTTTAGAGATGGC  270
V  93.9% (231/246)  IGHV4-31*01  229  .....................C...G.........T.......................C......------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      DR3-IMGT------------------------>                                  
                                       F  N  G  N  V  G  P  Y  F  D  S  W  G  Q  G  I  L  V  S  D  S  S  
                    Query_10674  271  TTCAATGGGAACGTCGGACCGTACTTTGACTCCTGGGGCCAGGGAATCCTTGTCTCCGACTCCTCAG  337
D  100.0% (6/6)     IGHD1-1*01   10   -------......------------------------------------------------------  15
J  89.1% (41/46)    IGHJ4*02     3    ---------------------..........A..............C...G...A...T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_352198

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_10675  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_10675  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_10675  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_10675  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_317418

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           413     2e-117
IGHD1-1*01                                                                                            14.1    9.0   
IGHJ3*01                                                                                              46.8    3e-09 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCATATATAGT	CTGGAAC	CTT	TCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCATATATAGTCTGGAACCTTTC	ATIYSLEPF	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	286	275	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  L 
                    Query_10676  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGGTACACCTTTACCAGCCTT  91
V  96.2% (275/286)  IGHV1-18*01  7    .......................................................................T...............TA.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_10676  92   GGTTTCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCCCAG  181
V  96.2% (275/286)  IGHV1-18*01  97   ...A...G..............................................................................A...  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  D  R  V  S  V  T  T  D  T  S  T  G  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10676  182  AAGCTCCAGGACAGAGTCTCCGTGACCACAGACACATCCACGGGCACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.2% (275/286)  IGHV1-18*01  187  ..........G.......A..A....................A.................C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------CDR3-IMGT-------->                                  
                                       V  Y  Y  C  A  T  I  Y  S  L  E  P  F  W  G  Q  V  T  V  V  T  V  S  S  
                    Query_10676  272  GTGTATTACTGTGCGACCATATATAGTCTGGAACCTTTCTGGGGCCAAGTCACGGTGGTCACCGTCTCTTCAG  344
V  96.2% (275/286)  IGHV1-18*01  277  ................---------------------------------------------------------  292
                                       V  Y  Y  C  A                                                           
D  100.0% (7/7)     IGHD1-1*01   8    ---------------------------.......---------------------------------------  14
J  88.9% (32/36)    IGHJ3*01     15   -------------------------------------............GG..AA..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_105169

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD1-1*01                                                                                            12.2    31   
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCCTTCGAGGAAAC	TACAAC	N/A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCTTCGAGGAAACTACAACGATGCTTTTGATGTC	ARLLRGNYNDAFDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	231	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  H  G  E  S  F  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10677  1    ACCCTGTCCCTCACCTGCACTGTCCATGGTGAGTCCTTCAGTGGTTACTACTGGAACTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAA  90
V  95.1% (231/243)  IGHV4-34*01  49   ..................G.....T......G.......................G.................................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_10677  91   TGGATTGGGGAAATCAATCATACTGGAAGCACCAACTACAACCCGTCCCTGAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAA  180
V  95.1% (231/243)  IGHV4-34*01  139  ......................G...........................C......................................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  L  R  G  N  Y  N  D  A 
                    Query_10677  181  CAATTCTCCCTGAACCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTTCTGTGCGAGACTCCTTCGAGGAAACTACAACGATGCT  270
V  95.1% (231/243)  IGHV4-34*01  229  ..G...........G................................G....A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-1*01   3    ------------------------------------------------------------------------------......------  8
J  98.0% (48/49)    IGHJ3*01     2    ------------------------------------------------------------------------------------......  7

                                      -------->                                  
                                       F  D  V  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10677  271  TTTGATGTCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  313
J  98.0% (48/49)    IGHJ3*01     8    ........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_317410

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         346     2e-97
IGHD2-2*02                                                                                            35.3    4e-06
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	GGATATTGTAGTGGTATCAGGTGCTTTACC	GGGGTAG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGGATATTGTAGTGGTATCAGGTGCTTTACCGGGGTAGGGTTCGACCCC	AREGYCSGIRCFTGVGFDP	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	30	25	2	3	83.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	251	238	10	3	94.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  S  V  S  G  D  S  I  S  S  G     Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10678    1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGCAGTGGG---TACTCCTGGAGCTGGATCCGGCAGCCACCGGGGAAGGGC  87
V  94.8% (238/251)  IGHV4-30-2*01  49   ..................G............G...............TGGT.............................A.........  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  R  S 
                    Query_10678    88   CTGGAGTGGATTGGGTACATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCATTAGACAGGTCC  177
V  94.8% (238/251)  IGHV4-30-2*01  139  ..........................................................................A...G...........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                         T  N  Q  V  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  Y  C  S  G  I 
                    Query_10678    178  ACGAACCAGGTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTACTGTGCCAGAGAGGGATATTGTAGTGGTATC  267
V  94.8% (238/251)  IGHV4-30-2*01  229  .A.......T................C.............................T..............-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.7% (26/30)    IGHD2-2*02     2    ------------------------------------------------------------------------............A...C.  19

                                        3-IMGT----------------------->                                  
                                         R  C  F  T  G  V  G  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10678    268  AGGTGCTTTACCGGGGTAGGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  86.7% (26/30)    IGHD2-2*02     20   ..C....A....----------------------------------------------------  31
J  100.0% (45/45)   IGHJ5*02       7    -------------------.............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_317413

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           406     1e-115
IGHD1-26*01                                                                                           10.3    131   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_10679  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAACCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  94.8% (275/290)  IGHV1-18*01  7    ................................G................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  F  A  Q 
                    Query_10679  92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTTTGCACAG  181
V  94.8% (275/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10679  182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (275/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10679  272  ATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  94.8% (275/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_317414

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           336     1e-94
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AC	ATTACGATTTTTCGAGTGGT	CTCATTATCGGAAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACATTACGATTTTTCGAGTGGTCTCATTATCGGAACTGACTAC	AREHYDFSSGLIIGTDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	233	18	0	92.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  R  G  S  Y  Y  W  S  W  N  R  Q  S  P  G  K  G 
                    Query_10680  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCGTCAGTAGAGGTTCTTACTACTGGAGTTGGAACCGGCAGTCCCCAGGGAAGGGA  90
V  92.8% (233/251)  IGHV4-61*01  49   .............................T...........C..T...AG............C....T.......C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  H  G  G  S  T  N  Y  H  P  S  L  R  S  R  V  T  I  S  I  D  T  S 
                    Query_10680  91   CTGGAGTGGATTGGGTATATTTATCACGGTGGGAGCACCAACTATCACCCCTCCCTCAGGAGTCGAGTCACCATATCAATAGACACGTCC  180
V  92.8% (233/251)  IGHV4-61*01  139  ....................C...T..A................CA............A...................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  H  Y  D  F  S  S 
                    Query_10680  181  AAGAACCAGTTCTCCCTGAAGCTGAATTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGAACATTACGATTTTTCGAGT  270
V  92.8% (233/251)  IGHV4-61*01  229  .........................GC..........................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-3*01   3    -------------------------------------------------------------------------............G....  19

                                      MGT-------------------->                                
                                       G  L  I  I  G  T  D  Y  W  G  Q  G  T  L  V  P  V  S  S
                    Query_10680  271  GGTCTCATTATCGGAACTGACTACTGGGGCCAGGGTACCCTGGTCCCCGTCTCCTC  326
D  95.0% (19/20)    IGHD3-3*01   20   ...-----------------------------------------------------  22
J  94.9% (37/39)    IGHJ4*02     8    -----------------..................A.........A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_317417

Length=299
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            224     7e-61
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GAATGAACCCTGAATT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATGAACCCTGAATTC	ERNEP*I	220	243	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	40	11	0	78.4
CDR2-IMGT	105	120	24	14	2	8	58.3
FR3-IMGT	121	219	114	89	10	15	78.1
CDR3-IMGT (germline)	220	226	7	7	0	0	100
Total	N/A	N/A	249	198	28	23	79.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  R  G  H  W  M  T  W  I  R  H  L  P  D  K  G  L  
                    Query_10681  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTCGTGGCCACTGGATGACTTGGATTCGCCACCTTCCAGATAAGGGGCTGC  90
V  79.5% (198/249)  IGHV3-7*01   47   ....................................C....A..A..T.T.......GC...G.C.....GGC.....GG.........G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  N  I  K  D  D  G                         S  E  G  P  I  H  H  L  P  R  Q  R  P
                    Query_10681  91   AGTGGGTGGCCAATATAAAGGACGATGGAA-----------------------GTGAAGGGCCGATTCACCATCTCCCGAGACAACGCCC  157
V  79.5% (198/249)  IGHV3-7*01   137  .............C......C.A.......GTGAGAAATACTATGTGGACTCT........................A...........A  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                        E  L  S  V  F  A  D  E  Q  P  E  S  R  R  H  G  C  I  L  L  C  E  R  N  E  P  *  I  L  G
                    Query_10681  158  AGAACTCTCTGTTTTTGCAGATGAACAACCTGAGAGTCGAAGACACGGCTGTATATTACTGTGCGAGAGGAATGAACCCTGAATTCTGGG  247
V  79.5% (198/249)  IGHV3-7*01   227  .......A....A.C....A.......G........C...G...........G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  94.3% (33/35)    IGHJ4*02     14   -------------------------------------------------------------------------------------.....  18

                                                                    
                                        P  G  N  P  G  H  R  L  V   
                    Query_10681  248  GCCAGGGAACCCTGGTCATCGTCTCGTCAG  277
J  94.3% (33/35)    IGHJ4*02     19   ..................C......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 28720752


Query= Query_317416

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           350     8e-99
IGHD3-10*01                                                                                           19.9    0.15 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAG	ATGGTTGGGGGAG	G	GAATA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGATGGTTGGGGGAGGGAATACTTCCAACAA	ARLDGWGREYFQQ	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10682  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACGACTTATGCAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-48*03  47   ..........................................GT.G.....A......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  G  D  S  G  R  T  T  Y  Y  A  D  S  V  K  G  R  F  A  I  S  R  D  N  A  
                    Query_10682  91   AGTGGGTTTCATACATTGGTGATAGTGGTAGAACCACATACTACGCAGACTCTGTGAAGGGCCGATTCGCCATCTCCAGAGACAACGCCA  180
V  95.2% (236/248)  IGHV3-48*03  137  .................A..AG.........T....T...............................A.....................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  R  L  D  G  W  G  R  E  
                    Query_10682  181  AGAACTCACTGTATCTGCAAATGAACGGCCTGAGAGCCGAGGACACGGCTGTTTATTATTGTGCGAGACTAGATGGTTGGGGGAGGGAAT  270
V  95.2% (236/248)  IGHV3-48*03  227  ..........................A...............................C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD3-10*01  9    ------------------------------------------------------------------------......C......-----  21
J  95.9% (47/49)    IGHJ1*01     4    --------------------------------------------------------------------------------------....  7

                                      ---------->                                  
                                      Y  F  Q  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10682  271  ACTTCCAACAATGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  315
J  95.9% (47/49)    IGHJ1*01     8    .......G..C..................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_296241

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAGTTAT	CAGGGT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGGCTCCACCCC	ARSGSGSYQGWLHP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	222	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  P  Y  Y  W  I  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10683  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGTCCTTACTACTGGATCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.7% (222/242)  IGHV4-59*01  49   ..................A............G..........AG...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  P  I  F  Y  T  G  S  T  K  Y  K  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  K 
                    Query_10683  91   TGGCTTGGCCCTATCTTTTACACTGGGAGCACCAAATACAAACCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCCAGGAAG  180
V  91.7% (222/242)  IGHV4-59*01  139  ...A....GTA.....A.....G............C.....C..........................A...G............A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  S  Y  Q  G  W 
                    Query_10683  181  CAGTTCTCCCTGAAACTGCGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGG  270
V  91.7% (222/242)  IGHV4-59*01  229  ..............G...A.C.........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (15/15)   IGHD3-10*01  11   ------------------------------------------------------------------...............---------  25
J  87.0% (40/46)    IGHJ5*02     6    ---------------------------------------------------------------------------------------...  8

                                      -------->                                  
                                       L  H  P  W  G  L  G  R  L  V  I  V  S  S  
                    Query_10683  271  CTCCACCCCTGGGGCCTGGGAAGACTGGTCATCGTCTCCTCAG  313
J  87.0% (40/46)    IGHJ5*02     9    T..G............A.....CC.......C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_296243

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAACA	TATGACT	TATAGCAGT	AGTCCATTA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATATGACTTATAGCAGTAGTCCATTAGACTAC	AKHMTYSSSPLDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	13	8	0	61.9
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	222	29	0	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  A  S  V  S  S  G  D  Y  Y  W  G  W  I  R  Q  P  P  G  R  G 
                    Query_10684  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCGTCAGTAGTGGTGACTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAGGGGG  90
V  88.4% (222/251)  IGHV4-39*01  49   ..................A............G....A....C...A..AGT..................................A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  Y  N  T  R  Y  P  Y  Y  S  L  S  L  K  S  R  V  T  I  S  V  D  S  S 
                    Query_10684  91   CTGGAGTGGCTTGGGAGTATCTATAATACTAGATATCCCTACTATAGTTTGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACTCGTCC  180
V  88.4% (222/251)  IGHV4-39*01  139  .........A..............T...G.G.GAGCA.......C.ACCC..................................A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  E  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  H  M  T  Y  S  S  S 
                    Query_10684  181  AAGAACGAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTTTATTTCTGTGCGAAACATATGACTTATAGCAGTAGT  270
V  88.4% (222/251)  IGHV4-39*01  229  ......C............A.................................G....A........G...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD6-19*01  4    ------------------------------------------------------------------------------.........---  12

                                      ----------->                                  
                                       P  L  D  Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_10684  271  CCATTAGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCTTCAG  316
J  95.0% (38/40)    IGHJ4*02     9    ------.............A.....................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_296245

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GAATGAACACTGC	CTGGTAC	TTGCTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGAACACTGCCTGGTACTTGCTTTACTTTGAAGAC	ARMNTAWYLLYFED	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	228	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  E  Y  A  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_10685  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTGAATATGCCATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (228/246)  IGHV3-23*01  47   ...........................................CAGC.........A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  N  L  S  G  T  G  G  S  T  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_10685  91   AGTGGGTCTCAAATCTTAGTGGGACTGGTGGTAGCACATACTACCCAGACTCCGTGAAGGGCCGGTTCACCGTGTCCAGAGACAATTCCA  180
V  92.7% (228/246)  IGHV3-23*01  137  ...........GC.A.......T.G...................G..........................A.C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  M  N  T  A  W  Y  L  
                    Query_10685  181  AGAACACTCTGTATCTACAAATGAGCAGCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGAATGAACACTGCCTGGTACTTGC  270
V  92.7% (228/246)  IGHV3-23*01  227  .......G........G.......A...........................A.....C.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ------------->                                  
                                      L  Y  F  E  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10685  271  TTTACTTTGAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  95.7% (44/46)    IGHJ4*02     3    --........CT....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_296246

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	N/A	TCGACCCTGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCGACCCTGCTTGACAAA	ASTLLDK	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10686  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGCACCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (229/245)  IGHV3-23*01  47   ....................................C........G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  T  G  I  S  G  S  G  E  N  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_10686  91   AGTGGGTCACAGGTATCAGTGGTAGTGGTGAAAACACATACTACGCAGACTCCGTGAAGGGCCGTTTCACCGTCTCCAGAGACAATTCCA  180
V  93.5% (229/245)  IGHV3-23*01  137  ........T...C...T.............GT.G..............................G......A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  T  V  S  V  Q  M  D  S  L  S  A  E  D  T  A  V  Y  Y  C  A  S  T  L  L  D  K  W  G  
                    Query_10686  181  AGAACACGGTGTCTGTGCAAATGGACAGCCTGAGCGCCGAGGACACGGCCGTATATTACTGTGCGTCGACCCTGCTTGACAAATGGGGCC  270
V  93.5% (229/245)  IGHV3-23*01  227  ........C...A.C........A..........A..............................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  92.9% (39/42)    IGHJ4*02     7    ---------------------------------------------------------------------------.....T.C.......  21

                                                                 
                                      Q  G  T  L  V  T  V  S  P  
                    Query_10686  271  AGGGAACCCTGGTCACCGTCTCCCCAG  297
J  92.9% (39/42)    IGHJ4*02     22   .......................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_296247

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           347     7e-98
IGHD3-22*01                                                                                           41.1    7e-08
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGGCCCCCC	TACTATGATCGTAGTGGTTATTAC	GAC	GATCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGACCGGCCCCCCTACTATGATCGTAGTGGTTATTACGACGATCCTTTTGATATG	ARDRPPYYDRSGYYDDPFDM	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10687  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACTTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGACTGG  90
V  94.4% (236/250)  IGHV3-74*01  47   .....................C...............C...............................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  G  D  G  T  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10687  91   TGTGGGTCTCACGGATTAATGGCGATGGCACTAGCACAAGTTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-74*01  137  .............T......A.T.....G.G.........C.................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      T  N  T  L  Y  L  E  M  T  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  R  P  P  Y  Y  D  
                    Query_10687  181  CGAACACACTGTATCTGGAAATGACCAGTCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCAAGAGACCGGCCCCCCTACTATGATC  270
V  94.4% (236/250)  IGHV3-74*01  227  A......G.........C......A...........C.................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.8% (23/24)    IGHD3-22*01  5    --------------------------------------------------------------------------------.........A  14

                                      R3-IMGT------------------------>                                  
                                      R  S  G  Y  Y  D  D  P  F  D  M  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10687  271  GTAGTGGTTATTACGACGATCCTTTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
D  95.8% (23/24)    IGHD3-22*01  15   ..............----------------------------------------------------  28
J  95.9% (47/49)    IGHJ3*02     2    -----------------...G..........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_296248

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           322     2e-90
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10688  1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_10688  91   CTAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-61*08  139  ..G..................T..T................C.................G.......TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N 
                    Query_10688  181  AGGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAAC  270
V  91.2% (228/250)  IGHV4-61*08  229  .A.................A.....GC..........................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G..G.....G.  22

                                      3-IMGT----------------------->                                  
                                       C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10688  271  TGCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  86.4% (19/22)    IGHD2-15*01  23   ......----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_296249

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            297     7e-83
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TCAG	TAGCAGTGGCTGG	AC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGTAGCAGTGGCTGGACCTTTGAGTCC	VSSSGWTFES	246	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	56	27	18	6	3	66.7
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	131	24	21	3	0	87.5
FR3-IMGT	132	245	114	102	12	0	89.5
CDR3-IMGT (germline)	246	246	1	1	0	0	100
Total	N/A	N/A	246	220	23	3	89.4


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  P  Y  R  W  M  N  W  V  R  Q  A  P  G  K  G  
                    Query_10689  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACATTTGATCCTTATCGTTGGATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGC  90
V  89.4% (220/246)  IGHV3-7*01   47   .....................................C...AG.AGC...---.......GC............................  133
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y     W  M  S  W  V  R  Q  A  P  G  K  G  

                                      ----------------><-------CDR2-IMGT------><------------------------------------------------
                                      L  E  W  V  A  N  I  N  L  D  G  S  D  K  N  Y  V  D  S  V  R  G  R  L  T  I  S  R  D  D  
                    Query_10689  91   TGGAGTGGGTGGCCAACATAAACCTAGATGGAAGTGACAAAAATTATGTGGACTCTGTGAGGGGCCGACTCACCATCTCCAGAGACGACG  180
V  89.4% (220/246)  IGHV3-7*01   134  ......................G.A............G...T.C................A.......T.................A...  223
                                      L  E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  

                                      ----FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-----
                                      A  R  N  S  V  Y  L  Q  M  D  S  L  R  A  E  D  T  A  I  Y  H  C  V  S  S  S  G  W  T  F  
                    Query_10689  181  CCAGGAACTCAGTATATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCTATTTATCACTGTGTCAGTAGCAGTGGCTGGACCTTTG  270
V  89.4% (220/246)  IGHV3-7*01   224  ...A.......C.G............A..........................G.G...T......------------------------  289
                                      A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                          
D  100.0% (13/13)   IGHD6-19*01  6    ----------------------------------------------------------------------.............-------  18
J  95.2% (40/42)    IGHJ4*02     5    -------------------------------------------------------------------------------------.....  9

                                      ---->                                
                                      E  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_10689  271  AGTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  307
J  95.2% (40/42)    IGHJ4*02     10   .C.A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_90626

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           375     2e-106
IGHD5-18*01                                                                                           21.8    0.040 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GATCTGG	GTGGATACAACTAT	TTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGAGATCTGGGTGGATACAACTATTTTCTTTGACGAC	TREIWVDTTIFFDD	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10690  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.0% (245/250)  IGHV3-33*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  W  Y  D  G  S  K  K  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10690  91   AGTGGGTGGCATTTATATGGTATGATGGAAGTAAAAAAAACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  98.0% (245/250)  IGHV3-33*01  137  ...........G......................T...T...................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  E  I  W  V  D  T  T  
                    Query_10690  181  AGAACACGCTGTATCTGCAAATGAGCAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTACGAGAGAGATCTGGGTGGATACAACTA  270
V  98.0% (245/250)  IGHV3-33*01  227  ........................A.....................................G.......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.9% (13/14)    IGHD5-18*01  1    -----------------------------------------------------------------------------.........G...  13

                                      ------------->                                  
                                      I  F  F  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10690  271  TTTTCTTTGACGACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  318
D  92.9% (13/14)    IGHD5-18*01  14   .-----------------------------------------------  14
J  95.5% (42/44)    IGHJ4*02     5    ----.......T...................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_263518

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           280     1e-77
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	CAAGGAAGCCGACCCAACCAC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGCAAGGAAGCCGACCCAACCACACTACTTTGACTCC	TRARKPTQPHYFDS	242	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	28	25	23	2	0	92
CDR1-IMGT	29	52	24	17	7	0	70.8
FR2-IMGT	53	103	51	47	4	0	92.2
CDR2-IMGT	104	127	24	17	7	0	70.8
FR3-IMGT	128	241	114	102	12	0	89.5
CDR3-IMGT (germline)	242	248	7	6	1	0	85.7
Total	N/A	N/A	245	212	33	0	86.5


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        L  R  L  S  C  A  G  F  G  F  S  F  S  S  Y  G  I  R  W  V  R  Q  A  P  G  K  G  L  E  Y
                    Query_10691  4    CCTGAGACTCTCCTGTGCAGGCTTTGGATTCAGTTTCAGTTCGTATGGCATACGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGGAATA  93
V  86.5% (212/245)  IGHV3-64*01  51   ....................C..C........CC......AGC....CT..G.A....................................  140
                                        L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  Y

                                      ---------><-------CDR2-IMGT------><----------------------------------------------------FR3
                                        V  A  G  I  S  T  D  G  S  K  T  S  Y  V  N  S  V  K  G  R  F  T  I  S  R  D  N  S  R  S
                    Query_10691  94   TGTTGCAGGTATTAGTACTGATGGTTCTAAGACATCTTATGTGAACTCTGTGAAGGGTAGATTCACCATCTCTAGAGACAATTCCAGGAG  183
V  86.5% (212/245)  IGHV3-64*01  141  ....T...C........G.A....GGG..GC....A.....CA..............C..............C.............A..A  230
                                        V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N

                                      -IMGT----------------------------------------------------><----------------CDR3-IMGT------
                                        T  V  F  L  Q  M  G  S  L  R  G  E  D  M  A  V  Y  Y  C  T  R  A  R  K  P  T  Q  P  H  Y
                    Query_10691  184  TACGGTGTTTCTTCAAATGGGCAGCCTGAGAGGTGAGGACATGGCCGTGTATTACTGTACGAGAGCAAGGAAGCCGACCCAACCACACTA  273
V  86.5% (212/245)  IGHV3-64*01  231  C...C...A.......................C............T............G......-------------------------  295
                                        T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                           
J  97.9% (47/48)    IGHJ4*02     1    --------------------------------------------------------------------------------------....  4

                                      --------->                                  
                                        F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10691  274  CTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  317
J  97.9% (47/48)    IGHJ4*02     5    ........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_263519

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     9e-100
IGHD3-16*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTTTAC	TACGTTTGGGGGAGT	CCAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTTTACTACGTTTGGGGGAGTCCATCTACTTTGACTAC	ARSLLRLGESIYFDY	247	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	60	33	26	4	3	78.8
FR2-IMGT	61	111	51	50	1	0	98
CDR2-IMGT	112	132	21	20	1	0	95.2
FR3-IMGT	133	246	114	112	2	0	98.2
CDR3-IMGT (germline)	247	252	6	6	0	0	100
Total	N/A	N/A	252	241	8	3	95.6


Alignments

                                      <--------FR1-IMGT---------><-----------CDR1-IMGT-----------><--------------------FR2-IMGT-
                                       T  L  S  L  T  C  T  V  S  G  A  P  P  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K 
                    Query_10692  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCCCCCCCATCAGCAGTGGCGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAG  90
V  95.6% (241/252)  IGHV4-31*03  49   ...............................G.T..---...........T...T...................................  135
                                       T  L  S  L  T  C  T  V  S  G  G  S     I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K 

                                      --------------------><-----CDR2-IMGT-----><-----------------------------------------------
                                       G  L  E  W  I  G  C  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  F  T  I  S  V  D  T 
                    Query_10692  91   GGCCTGGAGTGGATTGGGTGCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGATTTACCATATCAGTGGACACG  180
V  95.6% (241/252)  IGHV4-31*03  136  ...................A.................G...............................G.............A......  225
                                       G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T 

                                      -----FR3-IMGT----------------------------------------------------><-----------------CDR3-I
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  L  R  L  G 
                    Query_10692  181  TCTAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGATCTTTACTACGTTTGGGG  270
V  95.6% (241/252)  IGHV4-31*03  226  ........................................................................------------------  297
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                   
D  100.0% (15/15)   IGHD3-16*01  11   -------------------------------------------------------------------------------...........  21

                                      MGT----------------->                                  
                                       E  S  I  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_10692  271  GAGTCCATCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  325
D  100.0% (15/15)   IGHD3-16*01  22   ....---------------------------------------------------  25
J  97.9% (46/47)    IGHJ4*02     2    --------....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_239095

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           271     7e-75
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCT	TTCGGGGGGTT	CGATCTTCGGATTCACTCTTATACAGGGATATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTTCGGGGGGTTCGATCTTCGGATTCACTCTTATACAGGGATATTATGGTATGGATGTC	ARDLSGGSIFGFTLIQGYYGMDV	230	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	18	6	0	75
FR2-IMGT	41	91	51	48	3	0	94.1
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	99	15	0	86.8
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	199	26	0	88.4


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  L  N  F  G  S  Y  V  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  R  Y  D
                    Query_10693  13   GTCTGGACTCAATTTCGGAAGCTATGTCATGCACTGGGTCCGCCAGGCTCCAGGCAAAGGGCTGGAGTGGGTGGCAAATATACGGTATGA  102
V  88.4% (199/225)  IGHV3-33*01  72   .......T...CC...A.T.......G..............................G..................GT....T.......  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  E  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  E  N  S  K  N  M  L  Y  I  Q  M  N
                    Query_10693  103  TGGAAGTAATGAAAAATATGCAGACTCCGTGAAGGGCCGATTTACTATCTCCAGAGAGAATTCCAAGAACATGCTTTATATACAGATGAA  192
V  88.4% (199/225)  IGHV3-33*01  162  ..........A..T.C..........................C..C...........C.............C...G...C.G..A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------------------CDR3-IMGT--------------
                                        S  L  R  T  E  D  S  G  I  Y  Y  C  A  R  D  L  S  G  G  S  I  F  G  F  T  L  I  Q  G  Y
                    Query_10693  193  CAGCCTGAGAACCGAGGACTCGGGTATATATTACTGTGCGAGAGATCTTTCGGGGGGTTCGATCTTCGGATTCACTCTTATACAGGGATA  282
V  88.4% (199/225)  IGHV3-33*01  252  ..........G........A...C.G.G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  90.9% (10/11)    IGHD3-10*01  13   ------------------------------------------------.......A...-------------------------------  23

                                      --------------->                                 
                                        Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10693  283  TTATGGTATGGATGTCTGGGGCCAGGGGACCACGGTCACTGTCTCCTCA  331
J  93.3% (42/45)    IGHJ6*02     18   ----........C...........A..............C.........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_258538

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     1e-109
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGCA	N/A	GTATTACTATGGTTC	TT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCAGTATTACTATGGTTCTTTGGACCTC	ARQYYYGSLDL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	269	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  G  F  G  Y  S  F  T  S  Y
                    Query_10694  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAGGGGTTTTGGATACAGCTTTACCAGCTA  90
V  92.4% (269/291)  IGHV5-51*01  6    ..............................................................A.....C.....................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  W  I  G  L  I  F  P  N  D  F  D  A  R  Y  S  P
                    Query_10694  91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGTAAAGGCTTGGAGTGGATAGGCCTCATCTTTCCTAATGACTTCGATGCCAGATACAGTCC  180
V  92.4% (269/291)  IGHV5-51*01  96   ......................A.......G......C..........G..GA......A....GG.....CT...A..........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  L  S  V  D  K  S  T  S  T  A  Y  L  E  W  S  S  L  K  A  S  D  T  A
                    Query_10694  181  GTCCTTCCAAGGCCAGGTCACCCTCTCAGTCGACAAGTCCACCAGCACCGCCTACCTGGAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  92.4% (269/291)  IGHV5-51*01  186  ......................A......C...........T................C.......C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                 
                                        I  Y  Y  C  A  R  Q  Y  Y  Y  G  S  L  D  L  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10694  271  CATTTATTACTGTGCGAGGCAGTATTACTATGGTTCTTTGGACCTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  349
V  92.4% (269/291)  IGHV5-51*01  276  ...G..............A..----------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                             
D  100.0% (15/15)   IGHD3-10*01  1    ---------------------...............-------------------------------------------  15
J  97.6% (40/41)    IGHJ6*02     22   --------------------------------------.....G...................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_258539

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           361     4e-102
IGHD1-7*01                                                                                            16.1    2.2   
IGHJ2*01                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-7*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TCTCAGGGGGTCGG	GGAACTAC	GGAG	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTCTCAGGGGGTCGGGGAACTACGGAGTGGTACTTCGATCTC	ARVSGGRGTTEWYFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10695  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACTTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-74*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  M  K  S  D  G  S  S  T  S  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  A  
                    Query_10695  91   TGTGGGTCTCACGTATGAAAAGCGATGGAAGTAGCACAAGCTACGCGGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (240/249)  IGHV3-74*01  137  ................T..T..T.....G...........................A.................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  S  G  G  R  G  T  
                    Query_10695  181  GGAACACGTTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGTCTCAGGGGGTCGGGGAACTA  270
V  96.4% (240/249)  IGHV3-74*01  227  A.......C............................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-7*01   10   -----------------------------------------------------------------------------------.......  16

                                      T------------------>                                  
                                      T  E  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10695  271  CGGAGTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  100.0% (8/8)     IGHD1-7*01   17   .-----------------------------------------------------  17
J  100.0% (49/49)   IGHJ2*01     5    -----.................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_263510

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD5-18*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTTCCCAACCGAAATGTCAAAAC	GTGGATAC	CTGCGCCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTCCCAACCGAAATGTCAAAACGTGGATACCTGCGCCCTCTAC	ARLSQPKCQNVDTCALY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  S  Y
                    Query_10696  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTTCCAGTTA  90
V  96.2% (278/289)  IGHV5-51*03  6    ..................................................................T...............A....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_10696  91   CTGGATCGTCTGGGTGCGCCAGATGCCGGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGGCC  180
V  96.2% (278/289)  IGHV5-51*03  96   ........G..................C...........................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  H  L  Q  W  T  S  L  K  A  S  D  T  A
                    Query_10696  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCCACCTGCAATGGACCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (278/289)  IGHV5-51*03  186  ....................................................T.......G....G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  A  R  L  S  Q  P  K  C  Q  N  V  D  T  C  A  L  Y  W  G  Q  G  T  L  V  T  V
                    Query_10696  271  CATTTATTATTGTGCGAGACTTTCCCAACCGAAATGTCAAAACGTGGATACCTGCGCCCTCTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  96.2% (278/289)  IGHV5-51*03  276  ...G.....C.........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD5-18*01  1    -------------------------------------------........---------------------------------------  8
J  97.4% (37/38)    IGHJ4*02     11   ------------------------------------------------------------..............................  40

                                              
                                        S  A  
                    Query_10696  361  CTCCGCAG  368
J  97.4% (37/38)    IGHJ4*02     41   ....T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_263511

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           399     3e-113
IGHD6-19*01                                                                                           21.8    0.046 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAAAG	ATAGTAGTGGCTGG	CACAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAAAGATAGTAGTGGCTGGCACAATTACGGTATGGACGTC	AREKDSSGWHNYGMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  R  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  L  S  S  Y
                    Query_10697  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTGAGTAGCTA  90
V  93.8% (273/291)  IGHV1-69*01  6    ..................G.............A................................................C..C.....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  T  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  G  I  I  P  I  F  R  K  T  D  Y  A  Q
                    Query_10697  91   TGTCACCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCAGGGATCATCCCTATTTTTAGAAAAACAGACTACGCACA  180
V  93.8% (273/291)  IGHV1-69*01  96   ..CT.T............................................G...............C...G.T.C.G..A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  V  D  E  S  T  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  G
                    Query_10697  181  GAAGTTCCAGGGCAGAGTCACGATTACCGTGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGG  270
V  93.8% (273/291)  IGHV1-69*01  186  .............................C.......................................C...........G.......C  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  E  K  D  S  S  G  W  H  N  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_10697  271  CGTGTATTACTGTGCGAGAGAAAAAGATAGTAGTGGCTGGCACAATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  93.8% (273/291)  IGHV1-69*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD6-19*01  5    --------------------------....C.........--------------------------------------------------  18
J  100.0% (48/48)   IGHJ6*02     15   ----------------------------------------------............................................  58

                                          
                                        S 
                    Query_10697  361  CTCA  364
J  100.0% (48/48)   IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_263512

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           349     3e-98
IGHD3-16*01                                                                                           18.0    0.64 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	278	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	277	114	95	13	6	83.3
CDR3-IMGT (germline)	278	283	6	6	0	0	100
Total	N/A	N/A	289	258	25	6	89.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P  R  Y
                    Query_10698  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCCGTTA  90
V  89.3% (258/289)  IGHV5-51*03  6    .......................................................T.....A....T..........GC..TA..A.C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_10698  91   TTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGTCC  180
V  89.3% (258/289)  IGHV5-51*03  96   C........C.......................................................G.....................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D  T  A
                    Query_10698  181  GGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACACTGC  264
V  89.3% (258/289)  IGHV5-51*03  186  .T.....C.A...................C...C........CAGCACC.C...............C..C.................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10698  265  CATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  353
V  89.3% (258/289)  IGHV5-51*03  276  ...G........T......----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD3-16*01  18   --------------------........T...---------------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    ---------------------------------------......T......G.................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_258537

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           361     4e-102
IGHD3-22*01                                                                                           18.0    0.62  
IGHJ2*01                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTCAAACATT	TGATAGTGGTGCTTA	CGAGTTCCAGGACCCT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTCAAACATTTGATAGTGGTGCTTACGAGTTCCAGGACCCTTACTGGTACTTCGATCTC	AKVQTFDSGAYEFQDPYWYFDL	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  I  Y  D  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10699  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAATCTATGACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-23*01  47   ...........................................C.G.....C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10699  91   AGTGGGTCTCAGCTATCAGTGGGAGTGGTGGTACCACATATTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.4% (240/249)  IGHV3-23*01  137  ................T.....T..........G......C.................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  V  Q  T  F  D  S  G  
                    Query_10699  181  AGAACACGCTGTATCTACAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTTCAAACATTTGATAGTGGTG  270
V  96.4% (240/249)  IGHV3-23*01  227  ................G..A.................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  86.7% (13/15)    IGHD3-22*01  10   -------------------------------------------------------------------------------.......A...  20

                                      -CDR3-IMGT--------------------------->                                  
                                      A  Y  E  F  Q  D  P  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  F  S  S  
                    Query_10699  271  CTTACGAGTTCCAGGACCCTTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTTTCTCCTCAG  342
D  86.7% (13/15)    IGHD3-22*01  21   G...--------------------------------------------------------------------  24
J  98.1% (51/52)    IGHJ2*01     2    --------------------..........................................G.........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_263514

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           311     4e-87
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GGCAGGAGATGGAC	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCAGGAGATGGACTACGACTACTACTACGGCTTTGACGTC	ARGQEMDYDYYYGFDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	224	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  N  M  Y  A  F  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10700  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGCTTCAATATGTATGCCTTCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.0% (224/249)  IGHV3-33*01  47   ....................................C.....G..GC....G.A.G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  R  S  K  Y  N  V  G  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10700  91   AGTGGGTGGCAGTCATTTGGTATGACGGAAGGAGTAAATACAATGTGGGCTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAATTCCA  180
V  90.0% (224/249)  IGHV3-33*01  137  .............T..A........T.....T.A.......T...CA.A...............A.........................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  E  M  K  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  Q  E  M  D  Y  D  
                    Query_10700  181  AAAACACACTATATCTGGAAATGAAGAGCCTGAGAGTCGAGGACACGGCTGTATATTATTGTGCGAGAGGGCAGGAGATGGACTACGACT  270
V  90.0% (224/249)  IGHV3-33*01  227  .G.....G..G......C.......C..........C...............G.....C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  91.7% (55/60)    IGHJ6*02     3    -----------------------------------------------------------------------------------...T...  9

                                      T------------------>                                 
                                      Y  Y  Y  G  F  D  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_10700  271  ACTACTACGGCTTTGACGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCCTCA  323
J  91.7% (55/60)    IGHJ6*02     10   ..........TA.G.....................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_263515

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD1-1*01                                                                                            18.0    0.59 
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCAGTG	GGTACAACT	TTGGGAAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGGTACAACTTTGGGAATAACTGGTTCGACCCG	ARDPTGSGYNFGNNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  H  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10701  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGTCATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G..........AG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  K  G  G  I  T  N  H  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_10701  91   TGGATTGGATATGTCTATAAGGGCGGGATCACCAACCACAACCCCTCTCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G...A.....T.CA.T....G.......T..........C........................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  H  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_10701  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCTGACACGGCCATATATCACTGCGCGAGAGATCCTACCGGCAGTGGGTACAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  ...................................G.........G.G...T....T........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD1-1*01   1    -------------------------------------------------------------------------------.........--  9

                                      -------------------->                                  
                                       G  N  N  W  F  D  P  W  G  P  G  T  L  V  T  V  S  S  
                    Query_10701  271  GGGAATAACTGGTTCGACCCGTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  325
J  95.9% (47/49)    IGHJ5*02     3    ------..............C.......A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_258532

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            280     1e-77
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GAATGAACCCTGAATT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATGAACCCTGAATTC	ARGMNPEF	242	265	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	28	25	25	0	0	100
CDR1-IMGT	29	52	24	19	5	0	79.2
FR2-IMGT	53	103	51	40	11	0	78.4
CDR2-IMGT	104	127	24	20	4	0	83.3
FR3-IMGT	128	241	114	101	13	0	88.6
CDR3-IMGT (germline)	242	248	7	7	0	0	100
Total	N/A	N/A	245	212	33	0	86.5


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        L  R  L  S  C  A  A  S  G  F  I  F  R  G  H  W  M  T  W  I  R  H  L  P  D  K  G  L  Q  W
                    Query_10702  4    CCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTCGTGGCCACTGGATGACTTGGATTCGCCACCTTCCAGATAAGGGGCTGCAGTG  93
V  86.5% (212/245)  IGHV3-7*01   51   ................................C....A..A..T.T.......GC...G.C.....GGC.....GG.........G....  140
                                        L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W

                                      ---------><-------CDR2-IMGT------><----------------------------------------------------FR3
                                        V  A  N  I  K  E  D  G  S  E  E  H  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  A  Q  N
                    Query_10702  94   GGTGGCCAATATAAAGGAAGATGGAAGTGAAGAGCACTATGGTGACTCTGTGAAGGGCCGATTCACCATCTCCCGAGACAACGCCCAGAA  183
V  86.5% (212/245)  IGHV3-7*01   141  .........C......C.............GA.AT......TG..............................A...........A....  230
                                        V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N

                                      -IMGT----------------------------------------------------><-------CDR3-IMGT------>        
                                        S  L  F  L  Q  M  N  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  M  N  P  E  F  W  G  Q
                    Query_10702  184  CTCTCTGTTTTTGCAGATGAACAACCTGAGAGTCGAAGACACGGCTGTATATTACTGTGCGAGAGGAATGAACCCTGAATTCTGGGGCCA  273
V  86.5% (212/245)  IGHV3-7*01   231  ...A....A.C....A.......G........C...G...........G................-------------------------  295
                                        S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                           
J  94.3% (33/35)    IGHJ4*02     14   ---------------------------------------------------------------------------------.........  22

                                                                
                                        G  T  L  V  I  V  S  S  
                    Query_10702  274  GGGAACCCTGGTCATCGTCTCGTCAG  299
J  94.3% (33/35)    IGHJ4*02     23   ..............C......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_263517

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            380     1e-107
IGHD3-22*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTG	ATTACTATGATAGTAGTGGTTA	CCCA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTGATTACTATGATAGTAGTGGTTACCCAGACTAC	ASLDYYDSSGYPDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	114	0	0	100
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	244	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10703  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  99.6% (244/245)  IGHV4-4*02   49   ..............................................G...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_10703  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  99.6% (244/245)  IGHV4-4*02   139  ..........................................................................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  D  Y  Y  D  S  S  G 
                    Query_10703  181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGCCTTGATTACTATGATAGTAGTGGT  270
V  99.6% (244/245)  IGHV4-4*02   229  .................................................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (22/22)   IGHD3-22*01  3    ----------------------------------------------------------------------....................  22

                                      ----------->                                  
                                       Y  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10703  271  TACCCAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (22/22)   IGHD3-22*01  23   ..--------------------------------------------  24
J  100.0% (40/40)   IGHJ4*02     9    ------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_105160

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            327     9e-92
IGHD6-13*01                                                                                           12.2    32   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TT	GCAGCGCCTGGT	TTTGGTTTATTCGAGTTT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTTGCAGCGCCTGGTTTTGGTTTATTCGAGTTTGGTATGGACGTC	ARVAAPGFGLFEFGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  D  Y  A  M  H  W  V  R  Q  A  A  G  R  G  L  
                    Query_10704  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGAGGACTATGCCATGCACTGGGTCCGGCAAGCTGCAGGGAGGGGCCTGG  90
V  92.0% (229/249)  IGHV3-9*01   47   ...........................................T..T...........................C......A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  T  G  I  S  W  D  S  G  K  V  D  Y  A  A  S  V  K  G  R  F  S  I  S  R  D  N  A  
                    Query_10704  91   AGTGGGTCACAGGTATTAGTTGGGATAGCGGTAAAGTAGACTATGCGGCCTCTGTGAAGGGCCGATTCAGCATCTCCAGAGACAACGCCA  180
V  92.0% (229/249)  IGHV3-9*01   137  ........T..............A....T....GCA...G........A....................C....................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  S  S  L  F  L  Q  M  N  S  L  R  G  D  D  T  A  L  Y  Y  Y  A  R  V  A  A  P  G  F  G  
                    Query_10704  181  AGAGCTCCCTCTTTCTGCAAATGAACAGTCTGAGAGGTGACGACACGGCCTTGTATTACTATGCAAGAGTTGCAGCGCCTGGTTTTGGTT  270
V  92.0% (229/249)  IGHV3-9*01   227  ...A......G.A.......................C...G...................G.....A..---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  83.3% (10/12)    IGHD6-13*01  8    -----------------------------------------------------------------------.....AG.....-------  19

                                      GT-------------------->                                 
                                      L  F  E  F  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10704  271  TATTCGAGTTTGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (45/45)   IGHJ6*02     18   -----------.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_272078

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           330     1e-92
IGHD3-22*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGACA	GGGGGC	GGTTATGACT	T	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACAGGGGGCGGTTATGACTTACAACTGGTTCGACCCC	ARQGAVMTYNWFDP	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	231	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  S  L  Y  Y  W  A  W  I  R  Q  P  P  G  R  G 
                    Query_10705  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTAGTCTTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAGGGGG  90
V  92.0% (231/251)  IGHV4-39*01  49   ...................C............................AG...........G.......................A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  F  S  G  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  P 
                    Query_10705  91   CTGGAGTGGATTGGCACAATCTTTTCTGGTGGGACCACCTACTACAACCCGTCCCTCAAGAGCCGAGTCACCCTATCCGTGGACACGCCC  180
V  92.0% (231/251)  IGHV4-39*01  139  ..............G.GT....A..A.A......G...........................T.........A.......A......T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  S  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  G  A  V  M  T  Y 
                    Query_10705  181  AAGAGCCAGTTCTCCCTGAAACTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGCGACAGGGGGCGGTTATGACTTAC  270
V  92.0% (231/251)  IGHV4-39*01  229  ....A...............G......................................C......A....-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-22*01  20   -----------------------------------------------------------------------------......T...---  29
J  100.0% (51/51)   IGHJ5*02     1    ----------------------------------------------------------------------------------------..  2

                                      -------------->                                  
                                       N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10705  271  AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (51/51)   IGHJ5*02     3    .................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_239090

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            330     1e-92
IGHD3-10*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTGAC	TATTACGATGGTTC	AGGCAGGTCTTCTGGGGGCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTGACTATTACGATGGTTCAGGCAGGTCTTCTGGGGGCCGACTAC	ASLTITMVQAGLLGADY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  S  T  S  N  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_10706  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATCAGTACTAGTAACTGGTGGACTTGGGTCCGCCAGCCTCCAGGGAAGGGGCTG  90
V  93.1% (228/245)  IGHV4-4*02   49   ..................G............G.........C.G..............G...............C...............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  L  H  S  G  T  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  I  D  K  S  K 
                    Query_10706  91   GAGTGGATTGGGGAAATCCTTCACAGTGGGACCACCAACTACAACCCGTCCCTCAGGAGTCGAGTCACCATCTCAATAGACAAGTCGAAG  180
V  93.1% (228/245)  IGHV4-4*02   139  ..................TA...T.......G.......................A...............A...G..........C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  T  I  T  M  V  Q  A 
                    Query_10706  181  AACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGCCTGACTATTACGATGGTTCAGGCA  270
V  93.1% (228/245)  IGHV4-4*02   229  ................A.....G...........................G..............-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  92.9% (13/14)    IGHD3-10*01  2    -----------------------------------------------------------------------......T.......-----  15

                                      -------------------->                                  
                                       G  L  L  G  A  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_10706  271  GGTCTTCTGGGGGCCGACTACTGGGGCCAGGGGTCCCTAGTCACCGTCTCCTCAG  325
J  92.5% (37/40)    IGHJ4*02     9    ---------------.................AA....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_105161

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD3-16*01                                                                                           23.8    0.013 
IGHJ4*01                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCGGTGCCCCTGCTTTGGAGTC	TGATAATGTTTGGGGGAG	ATTTCAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCGGTGCCCCTGCTTTGGAGTCTGATAATGTTTGGGGGAGATTTCAGTAC	ARLGAPALESDNVWGRFQY	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	73	1	0	98.6
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	101	13	0	88.6
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	294	276	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_10707  2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  91
V  93.9% (276/294)  IGHV5-51*01  2    .............................G............................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  L  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_10707  92   ACTACTGGATCGGCTGGGTGCGCCAACTGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACAAGATACA  181
V  93.9% (276/294)  IGHV5-51*01  92   G........................GA.......................................................C.......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  Q  S  F  Q  G  Q  V  T  I  S  A  D  S  S  I  R  T  T  F  L  Q  W  N  S  L  Q  S  S  D  
                    Query_10707  182  GACAGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGCTCCATCAGAACCACCTTCCTGCAGTGGAATAGTCTGCAGTCCTCGGACA  271
V  93.9% (276/294)  IGHV5-51*01  182  .C.C...................................AG........C...G...A...........GC..C...A..G.........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  M  Y  Y  C  A  R  L  G  A  P  A  L  E  S  D  N  V  W  G  R  F  Q  Y  W  G  Q  G  T  
                    Query_10707  272  CCGCCATGTATTATTGTGCGAGACTCGGTGCCCCTGCTTTGGAGTCTGATAATGTTTGGGGGAGATTTCAGTACTGGGGCCAAGGAACCC  361
V  93.9% (276/294)  IGHV5-51*01  272  .............C..........------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  88.9% (16/18)    IGHD3-16*01  7    ----------------------------------------------....T.C...........--------------------------  24
J  97.3% (36/37)    IGHJ4*01     12   -----------------------------------------------------------------------...................  30

                                                        
                                      L  V  A  V  S  S  
                    Query_10707  362  TGGTCGCCGTCTCCTCAG  379
J  97.3% (36/37)    IGHJ4*01     31   .....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_239091

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     6e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_10708  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_10708  91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_10708  181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (39/39)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_10708  271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  100.0% (39/39)   IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_277636

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           355     3e-100
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_10709  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGCC  93
V  96.0% (237/247)  IGHV4-31*03  50   .....TCC...A.....................C......C.............................C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_10709  94   TGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  96.0% (237/247)  IGHV4-31*03  140  ....G.........T.C.........................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  
                    Query_10709  184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCG  273
V  96.0% (237/247)  IGHV4-31*03  230  ...................................................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  98.0% (50/51)    IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10709  274  ACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  312
J  98.0% (50/51)    IGHJ5*02     13   .................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_267989

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           308     4e-86
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ATTTCT	TATGGTTCGGGGAGT	CACGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAATTTCTTATGGTTCGGGGAGTCACGGGTGGTTCGACCCC	ARISYGSGSHGWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	220	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  K  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10710  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAAATACTTCTGGAGTTGGATCCGTCAGCCCCCCGGGAAGGGCCTGGAG  90
V  90.5% (220/243)  IGHV4-59*01  49   ...............................G.........T.GT....A......C........G........A........A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  I  G  T  T  S  Y  N  P  S  L  E  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_10710  91   TGGATTGGTTACATCTATTACATTGGGACCACCAGCTACAACCCCTCCCTCGAGAGTCGCGTCACCATATCAATAGACACGTCCAAGAAC  180
V  90.5% (220/243)  IGHV4-59*01  139  ........G..T..........G.....G.....A................A.......A............G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  R  A  M  Y  Y  C  A  R  I  S  Y  G  S  G  S  H  G 
                    Query_10710  181  CAGTTCTCCCTGAAGCTAACGTCTGTGACCGCTGCGGACAGGGCCATGTATTACTGTGCGCGAATTTCTTATGGTTCGGGGAGTCACGGG  270
V  90.5% (220/243)  IGHV4-59*01  229  .................G.GC...................C....G..............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (15/15)   IGHD3-10*01  8    ---------------------------------------------------------------------...............------  22

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_10710  271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  316
J  97.8% (45/46)    IGHJ5*02     6    ..........................................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_105163

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           358     4e-101
IGHD3-9*01                                                                                            19.9    0.16  
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGGAGGC	TGACTGGTTA	CTTAATTAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGAGGCTGACTGGTTACTTAATTAATGATGCTTATGATATC	ARGGRLTGYLINDAYDI	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  S  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10711  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCAGTTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-48*03  47   ....................G...............CC....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  T  S  S  G  T  I  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10711  91   AGTGGGTTTCATTCATTACTAGTAGTGGTACAATCATTTACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (239/249)  IGHV3-48*03  137  ............A.....G...........GT.C...A....................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  R  L  T  G  Y  
                    Query_10711  181  AGAACTCACTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGGGGGAGGCTGACTGGTTACT  270
V  96.0% (239/249)  IGHV3-48*03  227  ..........G..........................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-9*01   15   ------------------------------------------------------------------------------..........--  24

                                      GT-------------------->                                  
                                      L  I  N  D  A  Y  D  I  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_10711  271  TAATTAATGATGCTTATGATATCTGGGGCCAAGGGACATTGGTCGCCGTCTCTTCAG  327
J  94.0% (47/50)    IGHJ3*02     1    -------........T......................A.....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_126189

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           341     5e-96
IGHD2-8*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGCGGGGGGTTTATCATGA	TAATGGTG	GCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGCGGGGGGTTTATCATGATAATGGTGGCCTTGACTTC	ARRRGVYHDNGGLDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  Y  Y  W  N  W  I  R  Q  T  P  G  K  G  P  E 
                    Query_10712  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTACTACTGGAACTGGATCCGACAGACCCCAGGGAAGGGACCTGAG  90
V  94.7% (231/244)  IGHV4-59*08  49   .......................................A...............G.........G...C...............TG...  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  R  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10712  91   TGGATTGGGTATATCTATTCCAGGGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAAC  180
V  94.7% (231/244)  IGHV4-59*08  139  ...................A...T..................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  N  L  L  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  R  G  V  Y  H  D  N  G 
                    Query_10712  181  CAGTTCTCCCTGAACCTGCTCTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGAGACGGCGGGGGGTTTATCATGATAATGGT  270
V  94.7% (231/244)  IGHV4-59*08  229  ..............G...AG.................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD2-8*01   13   -----------------------------------------------------------------------------------.......  19

                                      ----------->                                  
                                       G  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10712  271  GGCCTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTTTCCTCAG  316
D  100.0% (8/8)     IGHD2-8*01   20   .---------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    ----......A...........................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_126188

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGACAG	ATTGTCGTAGTCCCCGGTGCTA	C	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGACAGATTGTCGTAGTCCCCGGTGCTACCTACGGTATGGACGTC	ARDRQIVVVPGATYGMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  S  S  S  Y  F  W  T  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_10713  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCAGCAGTAGTTACTTCTGGACTTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  90.6% (222/245)  IGHV4-59*01  49   .....................................T...........A.....GC.................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  D  G  S  G  S  P  R  Y  N  P  S  L  K  S  R  V  T  M  S  L  D  T  S  K  N 
                    Query_10713  91   TGGATTGGCTATGTCGATGGCAGTGGGAGTCCCAGGTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCGCTAGACACGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  ........G...A..T..TA.........CA...AC................................A..AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       R  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  Q  I  V  V  V  P  G 
                    Query_10713  181  CGATTCTCCCTGAGGCTGAATTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGACAGATTGTCGTAGTCCCCGGT  270
V  90.6% (222/245)  IGHV4-59*01  229  .AG..........A.....GC............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  81.8% (18/22)    IGHD2-2*01   6    ------------------------------------------------------------------------.....A.....A..A.C.  23

                                      -------------------->                                 
                                       A  T  Y  G  M  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_10713  271  GCTACCTACGGTATGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  324
D  81.8% (18/22)    IGHD2-2*01   24   ....--------------------------------------------------  27
J  98.0% (48/49)    IGHJ6*02     14   -----...............................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_267983

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           349     3e-98
IGHD6-19*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATGGAATTAG	ATAGTAGTGGCTGGTAC	GACCTGTCGTCATCCAAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATGGAATTAGATAGTAGTGGCTGGTACGACCTGTCGTCATCCAATTTTGACTAC	ARMELDSSGWYDLSSSNFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  Y  Y  T  M  N  *  V  R  Q  A  P  G  K  G  L  
                    Query_10714  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTTACTATACCATGAACTAGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.1% (235/247)  IGHV3-21*01  47   ....................................C.......AG.....G........G.............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  S  S  S  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10714  91   AGTGGGTCTCATCCATTAGTGGTAGTAGTAGTTCCATCTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.1% (235/247)  IGHV3-21*01  137  ....................A............A...A....................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  V  Q  L  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  M  E  L  D  S  S  G  
                    Query_10714  181  AGAACTCACTGTATGTGCAACTGAATAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGGATGGAATTAGATAGTAGTGGCT  270
V  95.1% (235/247)  IGHV3-21*01  227  ..............C.....A....C..........C..............................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.1% (16/17)    IGHD6-19*01  5    ------------------------------------------------------------------------------....C.......  16

                                      R3-IMGT------------------------>                                  
                                      W  Y  D  L  S  S  S  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10714  271  GGTACGACCTGTCGTCATCCAATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  94.1% (16/17)    IGHD6-19*01  17   .....-------------------------------------------------------------  21
J  100.0% (43/43)   IGHJ4*02     6    -----------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_267982

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           324     8e-91
IGHD3-22*01                                                                                           14.1    8.5  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAGGGAGCGGGATTT	TGATAGT	TT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAGGGAGCGGGATTTTGATAGTTTCTACGGTATGGACGTC	ARVRERDFDSFYGMDV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  V  R  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_10715  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCGTCAGAAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  92.6% (225/243)  IGHV4-59*02  50   .....TCC...A............................T...T.............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  M  Y  Y  S  G  N  T  R  Y  T  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  N  
                    Query_10715  94   GGATCGCGTATATGTATTACAGTGGGAACACCAGGTACACCCCCTCCCTCAAGAGTCGAGCCACCATATCAGTAGACACGTCCAAGAACC  183
V  92.6% (225/243)  IGHV4-59*02  140  ....T.G......C.............G.....AC....A....................T.............................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  K  Y  Y  C  A  R  V  R  E  R  D  F  D  S  F  
                    Query_10715  184  AGTTATCCCTGAAGCTGAGCTCTGTGACCGCAGCGGACACGGCCAAGTATTACTGTGCGAGAGTTAGGGAGCGGGATTTTGATAGTTTCT  273
V  92.6% (225/243)  IGHV4-59*02  230  ....C..........................T............GT.................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (7/7)     IGHD3-22*01  10   -------------------------------------------------------------------------------.......----  16
J  97.8% (45/46)    IGHJ6*02     14   ----------------------------------------------------------------------------------------..  15

                                      ------------->                              
                                      Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_10715  274  ACGGTATGGACGTCTGGGGCCAAGGGACCACTGTCACCGTCTCC  317
J  97.8% (45/46)    IGHJ6*02     16   ...............................G............  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_267981

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           308     4e-86
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTGG	AGCAGTGGCTGGT	CGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTGGAGCAGTGGCTGGTCGGTTTGACTTC	AREGGAVAGRFDF	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	224	27	0	89.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  R  G  S  V  S  S  G  G  Y  H  W  S  W  I  R  Q  T  P  G  R  G 
                    Query_10716  1    ACCCTGTCCCTCACCTGCTCTGTCTCTCGTGGCTCCGTCAGCAGTGGGGGTTATCACTGGTCCTGGATCCGGCAGACCCCAGGCAGGGGA  90
V  89.2% (224/251)  IGHV4-61*08  49   ..................A........G...................T.....CT.....AG.............C.......G.A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  F  T  G  T  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  A  D  M  S 
                    Query_10716  91   CTGGAGTGGATTGGCTATATCCACTTCACTGGGACCACCAAGTACAACCCCTCCCTTAAGAGTCGAGTCAGCATATCAGCAGACATGTCC  180
V  89.2% (224/251)  IGHV4-61*08  139  ..............G......T.T.A..G.....G......C..............C.............C........T.....C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  A  V  A  G 
                    Query_10716  181  AAGAACCAATTCTCCCTGAACCTGAGGTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTGCGAGAGAGGGTGGAGCAGTGGCTGGT  270
V  89.2% (224/251)  IGHV4-61*08  229  ........G...........G.....C..........................G..T..C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD6-19*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------->                                  
                                       R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10716  271  CGGTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02     6    ---.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_267980

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           375     3e-106
IGHD1-1*01                                                                                            14.1    9.2   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GGGAGGGGG	CAACTGG	GAACCCTTTAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTAC	ARGGGNWEPFTY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	288	264	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  Y
                    Query_10717  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCTA  90
V  91.7% (264/288)  IGHV5-51*01  6    .................................................................G............C......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  L  G  W  V  R  H  M  P  G  E  G  L  E  R  M  G  I  V  F  P  D  D  S  D  T  R  Y  S  P
                    Query_10717  91   CTGGCTCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAACGGATGGGGATCGTTTTTCCTGATGACTCTGATACCAGATACAGCCC  180
V  91.7% (264/288)  IGHV5-51*01  96   ....A.............C..G.........A..........GT...........A.C.A.....G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  I  T  I  S  A  D  K  S  I  T  T  A  F  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_10717  181  GTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCACCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACACCGC  270
V  91.7% (264/288)  IGHV5-51*01  186  .......C.......GG...........................G........A...........G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  G  A  R  G  G  G  N  W  E  P  F  T  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10717  271  CATCTATTACGGGGCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  91.7% (264/288)  IGHV5-51*01  276  ...G......T.T..G..-----------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------.......-------------------------------------------------  11
J  100.0% (38/38)   IGHJ4*02     11   ---------------------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_126180

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           319     2e-89
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGCCGGTTTACTCG	AGGATCTTTTAGCAGTAGCAGATGC	CACGAAAACGTTCCTTGATC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGCCGGTTTACTCGAGGATCTTTTAGCAGTAGCAGATGCCACGAAAACGTTCCTTGATCAC	AKDAGLLEDLLAVADATKTFLDH	232	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	10	1	0	90.9
CDR1-IMGT	19	42	24	21	3	0	87.5
FR2-IMGT	43	93	51	49	2	0	96.1
CDR2-IMGT	94	117	24	21	3	0	87.5
FR3-IMGT	118	231	114	109	5	0	95.6
CDR3-IMGT (germline)	232	239	8	8	0	0	100
Total	N/A	N/A	232	218	14	0	94


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  N  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  I  M  
                    Query_10718  8    GTGCAGTCTCTGGATTCACCTTCAATACTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCCATTATGC  97
V  94.0% (218/232)  IGHV3-30*18  65   ......C.................G..GC.....................................................AG....AT  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      P  Y  D  G  I  N  K  H  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_10718  98   CATATGATGGAATTAATAAACACTATGCAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAACTCCAAGAACACACTGTATCTGC  187
V  94.0% (218/232)  IGHV3-30*18  155  ............G.......T..............................C...............T...........G..........  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------------------CDR3-IMGT-------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  A  G  L  L  E  D  L  L  A  V  A  D  
                    Query_10718  188  AAATGAACAGCCTGAGAGCTGAGGACACGGCTGTATATTACTGTGCGAAAGATGCCGGTTTACTCGAGGATCTTTTAGCAGTAGCAGATG  277
V  94.0% (218/232)  IGHV3-30*18  245  ..................................G.................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  80.0% (20/25)    IGHD2-2*01   1    ------------------------------------------------------------------.....A..G...T....C...C..  24

                                      ---------------------->                                  
                                      A  T  K  T  F  L  D  H  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_10718  278  CCACGAAAACGTTCCTTGATCACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  334
D  80.0% (20/25)    IGHD2-2*01   25   .--------------------------------------------------------  25
J  97.2% (35/36)    IGHJ4*02     13   ---------------------........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_267985

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           400     9e-114
IGHD3-3*01                                                                                            10.3    133   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTAGGGGCGAGGGTA	ATTTT	CTTCAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAGGGGCGAGGGTAATTTTCTTCAGTAC	ARLRGEGNFLQY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  D  F  R  R  Y
                    Query_10719  1    GCAGCTGGTGCAGTCTGGAGGAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACGACTTTAGGAGATA  90
V  94.1% (273/290)  IGHV5-51*01  6    ....................C............................................G..........AG.....CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  A  G  K  G  L  E  Y  M  G  I  I  Y  P  N  D  S  D  I  R  Y  G  P
                    Query_10719  91   CTGGATCGGCTGGGTGCGCCAGATGGCCGGGAAAGGCCTGGAGTACATGGGGATCATCTATCCTAATGACTCTGATATCAGATACGGTCC  180
V  94.1% (273/290)  IGHV5-51*01  96   .........................C..................GG..................GG...........C.......A.C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  K  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_10719  181  GTCCTTCAAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.1% (273/290)  IGHV5-51*01  186  .......C................C.................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  L  R  G  E  G  N  F  L  Q  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_10719  271  CATGTATTACTGTGCGAGACTTAGGGGCGAGGGTAATTTTCTTCAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  353
V  94.1% (273/290)  IGHV5-51*01  276  ....................---------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (5/5)     IGHD3-3*01   9    -----------------------------------.....-------------------------------------------  13
J  97.3% (36/37)    IGHJ4*02     12   ----------------------------------------------.................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_267984

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           311     4e-87
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACGGTAAAGGG	GGTTATTACT	GT	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACGGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTACGGACGTC	ARTVKGVITVYQYFATDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  *  I  R  Q  R  P  G  K  G  L  E 
                    Query_10720  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTAGATCCGCCAGCGCCCAGGGAAGGGACTGGAG  90
V  90.9% (221/243)  IGHV4-34*01  49   ................................G...T..................G..G...........C............G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  I  S  L  D  M  S  K  N 
                    Query_10720  91   TGGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGAGTCTCCATATCATTAGACATGTCCAAGAAT  180
V  90.9% (221/243)  IGHV4-34*01  139  .............................C..................C..A...........A........G......C.........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  I  S  V  R  V  T  S  V  T  A  A  D  T  A  T  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y 
                    Query_10720  181  CAGATCTCCGTGAGGGTGACGTCTGTGACCGCCGCGGACACGGCTACTTATTACTGTGCGAGAACGGTAAAGGGGGTTATTACTGTCTAC  270
V  90.9% (221/243)  IGHV4-34*01  229  ...T.....C...A.C...GC........................GTG...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  20   --------------------------------------------------------------------------..........------  29
J  91.4% (53/58)    IGHJ6*02     5    --------------------------------------------------------------------------------------....  8

                                      -------------------->                                 
                                       Q  Y  F  A  T  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10720  271  CAGTACTTCGCTACGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  91.4% (53/58)    IGHJ6*02     9    T.C....A..G..T........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_37962

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           291     5e-81
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACG	TACGGTGAC	CCTACACTCCCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACGTACGGTGACCCTACACTCCCATACTTTGACTCT	ARTYGDPTLPYFDS	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	27	25	25	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	246	216	30	0	87.8


Alignments

                                      <-------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT------
                                        L  S  L  T  C  T  V  S  G  D  S  M  S  S  G  G  Y  L  W  S  W  I  R  Q  N  P  G  K  G  L
                    Query_10721  3    CCTGTCCCTCACCTGCACTGTCTCTGGTGACTCTATGAGCAGTGGCGGCTATCTCTGGAGCTGGATCCGCCAAAACCCAGGGAAGGGCCT  92
V  87.8% (216/246)  IGHV4-31*03  51   .............................G...C..C........T..T..CTA..................GC................  140
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  L

                                      ---------------><-----CDR2-IMGT-----><----------------------------------------------------
                                        E  W  I  G  S  I  Y  Y  S  G  T  S  Y  Y  S  P  S  L  K  R  R  L  T  I  S  V  G  T  S  E
                    Query_10721  93   GGAGTGGATTGGGAGCATCTATTACAGTGGAACCTCCTACTACAGCCCGTCCCTCAAGAGGCGACTTACAATATCAGTAGGCACTTCTGA  182
V  87.8% (216/246)  IGHV4-31*03  141  .............TA...............G.G.A.........A...............T...G....C..........A...G...A.  230
                                        E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K

                                      FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT---
                                        K  H  F  S  L  K  L  T  S  M  T  A  A  D  T  A  I  Y  F  C  A  R  T  Y  G  D  P  T  L  P
                    Query_10721  183  GAAGCACTTCTCCCTGAAGCTGACCTCTATGACTGCCGCGGACACGGCCATATATTTTTGTGCGAGGACGTACGGTGACCCTACACTCCC  272
V  87.8% (216/246)  IGHV4-31*03  231  ...C..G................G....G....................G.G....AC........------------------------  296
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                           
D  100.0% (9/9)     IGHD4-17*01  5    ----------------------------------------------------------------------.........-----------  13

                                      ------------>                                  
                                        Y  F  D  S  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_10721  273  ATACTTTGACTCTTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  319
J  93.5% (43/46)    IGHJ4*02     3    -..........AC.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_37961

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           410     1e-116
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ2*01                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGA	TACTATGACAGTAGTGGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTC	ARDGYYDSSGYYYDL	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  S  Y  S  F  S  S  H 
                    Query_10722  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTAGTTACAGTTTTAGCAGCCAC  91
V  95.2% (276/290)  IGHV1-18*04  7    .....................................................................G......CC....C....T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  D  Y  A  R 
                    Query_10722  92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGGTGGATCAGCGGTTACAATGGTAACACAGACTATGCACGG  181
V  95.2% (276/290)  IGHV1-18*04  97   ................................A.................A..........C................A.........A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  A  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  T  S  D  D  T  A 
                    Query_10722  182  AAGTTCCAGGGCAGAGTCACCATGACCGCAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGACATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*04  187  ...C.......................A.............................................G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  D  G  Y  Y  D  S  S  G  Y  Y  Y  D  L  W  G  R  G  T  L  V  T  V  S  S 
                    Query_10722  272  GTGTATTACTGTGCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTCTGGGGCCGGGGAACCCTGGTCACTGTCTCCTCA  361
V  95.2% (276/290)  IGHV1-18*04  277  ...............A....----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  95.2% (20/21)    IGHD3-22*01  5    ------------------------........T............---------------------------------------------  25
J  91.3% (42/46)    IGHJ2*01     8    ---------------------------------------------....T...T...........T..C.....................  52

                                       
                                       
                    Query_10722  362  G  362
J  91.3% (42/46)    IGHJ2*01     53   .  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_37960

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           346     2e-97
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CACCC	TATTGTAGTAGTGTCAGTTGTTATG	AGGGATC	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGCACCCTATTGTAGTAGTGTCAGTTGTTATGAGGGATCCTACCATTACGGTATGGACGTC	VRAPYCSSVSCYEGSYHYGMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10723  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCCGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-33*01  47   ............................T................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  T  V  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10723  91   AGTGGGTGGCAATTATATGGTATGATGGAACTGTTAAATACTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-33*01  137  ...........G..................G.AA...........C............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  D  D  T  A  V  Y  F  C  V  R  A  P  Y  C  S  S  V  
                    Query_10723  181  AGAACACGTTGTATTTGCAAATGGATAGCCTGAGAGCCGACGACACGGCTGTGTATTTCTGTGTGAGAGCACCCTATTGTAGTAGTGTCA  270
V  94.4% (235/249)  IGHV3-33*01  227  ........C.....C........A.C..............G................A.....C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.0% (21/25)    IGHD2-2*01   5    --------------------------------------------------------------------------............AC..  20

                                      -CDR3-IMGT--------------------------->                                 
                                      S  C  Y  E  G  S  Y  H  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10723  271  GTTGTTATGAGGGATCCTACCATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  84.0% (21/25)    IGHD2-2*01   21   .C..C....--------------------------------------------------------------  29
J  96.4% (53/55)    IGHJ6*02     8    ----------------....T.C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_37967

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     4e-93
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_10724  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  S  L  K  P  R  V  T  I  S  L  D  T  S  K  N 
                    Query_10724  91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCTCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-59*08  139  ...A....G......T.......T..............................AG............A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G 
                    Query_10724  181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGT  270
V  93.4% (228/244)  IGHV4-59*08  229  .............A......C..........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_10724  271  TATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  334
J  94.2% (49/52)    IGHJ1*01     1    ------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_37969

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*04                                                                                           355     4e-100
IGHD2-21*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*04	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGG	TGTGGTGG	GCGCCCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTGGTGGGCGCCCCCCTTGACTAT	ARGGVVGAPLDY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	70	5	0	93.3
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	18	6	0	75
FR3-IMGT	175	288	114	97	17	0	85.1
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	261	34	0	88.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  Q  P  G  S  S  V  R  V  S  C  K  T  S  G  G  S  F  T 
                    Query_10725  1    CAGGTTCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGCAGCCTGGGTCCTCGGTGAGGGTCTCCTGCAAGACCTCTGGAGGTAGTTTCACC  90
V  88.5% (261/295)  IGHV1-69*04  1    .....C..............................A..................A.............G.T........C.CC....G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  M  P  L  H  G  I  G  N  N 
                    Query_10725  91   AGCTATGCGATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGTATCATGCCTCTGCATGGCATAGGAAATAAC  180
V  88.5% (261/295)  IGHV1-69*04  91   ........T..................................................G.....C...A.C.T...T....C...CT..  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  I  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  E  K  L  Q  G  R  V  T  I  T  A  D  A  S  R  R  T  A  Y  M  E  L  R  S  L  R  S  G  D 
                    Query_10725  181  GCAGAGAAGCTCCAGGGCAGAGTCACGATAACCGCGGACGCATCAAGGAGGACAGCCTACATGGAGTTGAGAAGCCTGAGATCTGGTGAC  270
V  88.5% (261/295)  IGHV1-69*04  181  ...C.....T...................T.........AA...C.C...C...............C....C.............AG...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  M  Y  F  C  A  R  G  G  V  V  G  A  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10725  271  ACGGCCATGTATTTTTGTGCGAGAGGAGGTGTGGTGGGCGCCCCCCTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  88.5% (261/295)  IGHV1-69*04  271  ......G......AC..........---------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD2-21*01  8    -----------------------------........---------------------------------------------------  15
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------.......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_306768

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            310     1e-86
IGHD3-16*01                                                                                           12.2    32   
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGG	GGGGGA	ATGTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGGGGGGGAATGTCCTACTCCCACGGTTTGGACGTG	ARGGGGMSYSHGLDV	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	24	3	3	80
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	226	21	3	90.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  V  I  S  G  D  S  V  S  S  T  T  N  W  W  T  W  V  R  Q  P  P  G  K  G 
                    Query_10726  1    ACCCTGTCCCTCACCTGCGTTATCTCTGGTGACTCCGTCAGCAGTACGACTAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGG  90
V  90.4% (226/250)  IGHV4-4*02   49   ...................C.G.........G....A.........G---...........G............................  135
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S     N  W  W  S  W  V  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       P  Q  W  I  G  E  I  L  H  T  G  S  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  I  H  K  S 
                    Query_10726  91   CCGCAATGGATTGGGGAAATCCTTCATACTGGGAGTACCAACTACGACCCGTCCCTCAAGAGTCGAGTCACCATATCAATACACAAGTCC  180
V  90.4% (226/250)  IGHV4-4*02   136  .T.G.G...............TA.....G......C.........A................................G..G........  225
                                       L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       E  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  G  M  S  Y 
                    Query_10726  181  GAGAATCAGTTTTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGCGAGGGGGGGGGGGAATGTCCTAC  270
V  90.4% (226/250)  IGHV4-4*02   226  A....C.....C.............G........................................A...--------------------  295
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-16*01  18   ---------------------------------------------------------------------------......---------  23
J  92.7% (51/55)    IGHJ6*02     8    --------------------------------------------------------------------------------------....  11

                                      ----------------->                                 
                                       S  H  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10726  271  TCCCACGGTTTGGACGTGTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  321
J  92.7% (51/55)    IGHJ6*02     12   .A.T.....A.......C.................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_291149

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           416     2e-118
IGHD1-20*01                                                                                           29.5    2e-04 
IGHJ3*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-20*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGAAAA	TATAACTGGAACGAC	GGAAT	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATC	ARVGKYNWNDGIAFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N  S  F
                    Query_10727  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAACAGCTT  90
V  95.9% (278/290)  IGHV1-69*01  6    ..........................................C........................................G.....A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  N  W  V  R  Q  A  P  G  H  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  K  Y  A  Q
                    Query_10727  91   TGCTGTCAACTGGGTGCGACAGGCCCCTGGACACGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAACAAAATACGCACA  180
V  95.9% (278/290)  IGHV1-69*01  96   ....A...G........................A..........................................G....C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_10727  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGGACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.9% (278/290)  IGHV1-69*01  186  .............................................C....C.......................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  V  G  K  Y  N  W  N  D  G  I  A  F  D  I  W  G  Q  G  S  I  V  S  V  S
                    Query_10727  271  CGTTTATTATTGTGCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATCTGGGGCCAAGGGTCAATAGTCTCCGTCTC  360
V  95.9% (278/290)  IGHV1-69*01  276  ...G.....C..........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (15/15)   IGHD1-20*01  3    ----------------------------...............-----------------------------------------------  17
J  91.5% (43/47)    IGHJ3*02     4    ------------------------------------------------...T.....................A....G...A.......  45

                                           
                                        S  
                    Query_10727  361  TTCAG  365
J  91.5% (43/47)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_688

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           339     2e-95
IGHD2-21*02                                                                                           14.1    8.6  
IGHJ1*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-21*02	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GCTGTGAGCCGTGGCGG	GGTGGCGTCTGCT	CAGGACGGTGGAGT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGCTGTGAGCCGTGGCGGGGTGGCGTCTGCTCAGGACGGTGGAGT	AKGCEPWRGGVCSGRWS	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  F  A  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_10728  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAACTTTGCCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-30*18  47   .............................................G..A..G...................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  T  N  E  Y  Y  A  D  S  V  K  G  R  L  A  M  Y  R  D  N  S  
                    Query_10728  91   AGTGGGTGGCAGTTATATCATATGATGGAACTAATGAATACTATGCCGACTCCGTGAAGGGCCGACTCGCCATGTACAGAGACAACTCCA  180
V  93.6% (233/249)  IGHV3-30*18  137  ..............................G....A..........A..................T..A....C.C.........T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  I  L  Y  L  Q  M  N  G  L  R  V  E  D  T  A  V  Y  Y  C  A  K  G  C  E  P  W  R  G  
                    Query_10728  181  AGAACATCCTGTATCTGCAAATGAACGGCCTGAGAGTTGAGGACACGGCTGTGTATTACTGTGCGAAAGGCTGTGAGCCGTGGCGGGGTG  270
V  93.6% (233/249)  IGHV3-30*18  227  ......CG..................A.........C................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  84.6% (11/13)    IGHD2-21*02  11   --------------------------------------------------------------------------------------....  14

                                      GT-------------------->                                  
                                      G  V  C  S  G  R  W  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10728  271  GCGTCTGCTCAGGACGGTGGAGTTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  327
D  84.6% (11/13)    IGHD2-21*02  15   .T.A.....------------------------------------------------  23
J  100.0% (34/34)   IGHJ1*01     19   -----------------------..................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_689

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         305     3e-85
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	CC	TACTATGA	CAGAAGGGGGTTTC	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGCCTACTATGACAGAAGGGGGTTTCATGGTTTTGATATC	ARAYYDRRGFHGFDI	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	99	15	0	86.8
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	222	27	0	89.2


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  S  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  H  P  P  G  K  G  
                    Query_10729    4    CCCTGAGACTCTCCTGCGCTGTCTCTAGTGGCTCCATTAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCACCCCCCAGGGAAGGGCC  93
V  89.2% (222/249)  IGHV4-30-4*01  50   .....TCC...A.....A........G..........C...................................G................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  D  N  S  G  R  T  Y  Y  S  P  A  L  K  S  R  A  F  M  S  I  G  T  S  
                    Query_10729    94   TGGAGTGGATTGGTTACATCGATAACAGTGGGAGGACCTACTACAGCCCGGCCCTCAAGAGTCGAGCTTTCATGTCGATAGGCACGTCCA  183
V  89.2% (222/249)  IGHV4-30-4*01  140  .............G......T..T..........C..........A....T...............T.AC...A..AG...A........  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        K  N  Q  F  P  L  T  L  R  S  V  T  A  A  D  T  A  K  Y  Y  C  A  R  A  Y  Y  D  R  R  G  
                    Query_10729    184  AGAACCAGTTCCCCCTGACCCTGAGGTCTGTGACTGCCGCAGACACGGCCAAGTATTACTGTGCCAGAGCCTACTATGACAGAAGGGGGT  273
V  89.2% (222/249)  IGHV4-30-4*01  230  ...........T......AG.....C........................GT.................---------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-22*01    5    -----------------------------------------------------------------------........-----------  12

                                        ---------------->                                  
                                        F  H  G  F  D  I  W  G  P  G  T  V  V  T  V  S  S  
                    Query_10729    274  TTCATGGTTTTGATATCTGGGGCCCAGGGACAGTGGTCACCGTCTCTTCAG  324
J  93.8% (45/48)    IGHJ3*02       3    ---...C.................A.......A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_686

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGCA	TGGGGACG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATGGGGACGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_10730  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_10730  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  R  A  S  D  T  A
                    Query_10730  181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAGGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .......C.....................................C...........G......A.........A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_10730  271  CATATATTACTGTGCGAGGCATGGGGACGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  ...G..............A..---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_10730  361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_291143

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10731  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (239/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  P  S  K  N 
                    Query_10731  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACCCGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  ....................................................................A.........A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_10731  181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  .............A.............................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10731  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_684

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            324     8e-91
IGHD1-20*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-20*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTAAACCGGGATCGT	GGTATAA	AGGCTACG	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAAACCGGGATCGTGGTATAAAGGCTACGACTGCTTTGACTAC	ET*TGIVV*RLRLL*L	237	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	23	12	10	0	2	83.3
CDR1-IMGT	24	47	24	20	4	0	83.3
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	113	1	0	99.1
CDR3-IMGT (germline)	237	242	6	6	0	0	100
Total	N/A	N/A	231	221	8	2	95.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A    V  W  I  H  L  W  D  P  L  D  D  L  G  P  P  G  S  R  E  G  A  G  V  G  G  Q  H  
                    Query_10732  14   TGTGCAG--TCTGGATTCACCTTTGGGATCCATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATA  101
V  95.7% (221/231)  IGHV3-7*01   64   .......CC...............A.T.G.T.........G.................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                      K  G  R  W  K  *  D  I  L  C  G  L  F  E  G  P  I  H  H  L  Q  R  Q  R  Q  E  L  T  V  S  
                    Query_10732  102  AAGGAAGATGGAAGTGAGACATACTATGTGGACTCTTTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTG  191
V  95.7% (221/231)  IGHV3-7*01   154  ...C...............A................G.....................................................  243
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><--------------------CDR3-IMGT---------------
                                      A  N  E  Q  P  E  S  R  G  H  G  C  V  L  L  C  E  T  *  T  G  I  V  V  *  R  L  R  L  L  
                    Query_10732  192  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGACTTAAACCGGGATCGTGGTATAAAGGCTACGACTGCTTT  281
V  95.7% (221/231)  IGHV3-7*01   244  ...................................................---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (7/7)     IGHD1-20*01  1    -------------------------------------------------------------------.......----------------  7
J  93.8% (45/48)    IGHJ4*02     1    ----------------------------------------------------------------------------------...A....  8

                                      ----->                                  
                                      *  L  L  G  P  G  N  P  G  Q  R  L  L   
                    Query_10732  282  GACTACTGGGGCCCGGGAACCCTGGTCAGCGTCTCCTCAG  321
J  93.8% (45/48)    IGHJ4*02     9    .............A..............C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_291141

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            353     1e-99
IGHD4-17*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AC	ACGGTGACTAC	CGATTC	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAACACGGTGACTACCGATTCTACTACTATTACTACGGACTGGACGTC	VREHGDYRFYYYYYGLDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  A  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10733  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTTAGTGCCTATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-7*03   47   ....................G.......................AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  N  E  K  H  Y  V  G  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10733  91   AATGGGTGGCCAACATAAAACAAGATGGAAATGAGAAACACTATGTGGGCTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-7*03   137  .G.................G..........G.......T.........A...............A.........................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  E  H  G  D  Y  R  F  
                    Query_10733  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGTGAGAGAACACGGTGACTACCGATTCT  270
V  95.2% (238/250)  IGHV3-7*03   227  ....................................................G..........C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD4-17*01  6    ------------------------------------------------------------------------...........-------  16
J  95.0% (57/60)    IGHJ6*02     3    -----------------------------------------------------------------------------------------.  3

                                      IMGT--------------------->                                 
                                      Y  Y  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10733  271  ACTACTATTACTACGGACTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  95.0% (57/60)    IGHJ6*02     4    .......C........TA.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_682

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            391     6e-111
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_10734  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.1% (270/290)  IGHV1-8*02   6    ..................G..........................................................C.....C......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_10734  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.1% (270/290)  IGHV1-8*02   96   ........A.........................................................C.......................  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_10734  181  GAAGTTCAAGGGTAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.1% (270/290)  IGHV1-8*02   186  .......C....C.......C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10734  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.1% (270/290)  IGHV1-8*02   276  ...G................---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01   9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_291147

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD2-21*01                                                                                           18.0    0.60 
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CAGTTTCTGTCTTAGTTTGGACCGGGGAGT	TTGTGGTGG	N/A	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGGGGAGTTTGTGGTGGTTTTGATATG	ARGSFCLSLDRGVCGGFDM	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  N  G  G  S  L  N  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10735  1    ACCCTGTCCCTCACCTGCGCCGTCAATGGTGGGTCCCTCAATGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAG  90
V  92.2% (226/245)  IGHV4-34*01  49   ....................T...T...........T...G..G.......................................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  Q  S  G  T  T  N  Y  K  P  S  L  K  S  R  V  I  T  S  V  D  T  S  K  N 
                    Query_10735  91   TGGATTGGGGAAATCAATCAAAGTGGCACCACCAACTACAAGCCGTCCCTCAAGAGTCGAGTAATCACATCGGTGGACACGTCCAAGAAT  180
V  92.2% (226/245)  IGHV4-34*01  139  ....................T.....A.G............C....................C.C..T...A..A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  F  C  L  S  L  D  R 
                    Query_10735  181  CAGTTCTCCTTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGG  270
V  92.2% (226/245)  IGHV4-34*01  229  .........C.....C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      ----------------------->                               
                                       G  V  C  G  G  F  D  M  W  G  Q  G  T  M  V  T  V  S  
                    Query_10735  271  GGAGTTTGTGGTGGTTTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTT  325
D  100.0% (9/9)     IGHD2-21*01  7    -----.........-----------------------------------------  15
J  97.6% (40/41)    IGHJ3*02     7    --------------.........C...............................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_680

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           291     5e-81
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	TCCGCACGTG	GGTACA	TCTCTGGTGTGCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCGCACGTGGGTACATCTCTGGTGTGCTCTTTGACTAC	SARGYISGVLFDY	249	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	134	30	24	6	0	80
FR3-IMGT	135	248	114	101	13	0	88.6
Total	N/A	N/A	248	217	31	0	87.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  T  S  G  F  N  F  G  D  Y  A  V  T  W  V  R  Q  V  P  G  K  G  L  
                    Query_10736  1    GGTCCCTGAGACTCTCCTGTTCAACCTCTGGATTCAACTTTGGTGACTATGCTGTGACTTGGGTCCGCCAGGTTCCAGGGAAGGGACTGG  90
V  87.5% (217/248)  IGHV3-49*04  47   ....................A..G.T..........C.........T......A...GC.............C............G....  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  G  Q  G  Y  G  G  T  A  D  Y  A  A  S  V  R  G  R  F  L  I  S  R  D  
                    Query_10736  91   AGTGGGTCGGATTCATTAGAGGCCAAGGGTATGGTGGGACAGCGGACTACGCCGCGTCTGTGAGAGGCAGATTCCTTATCTCAAGAGATG  180
V  87.5% (217/248)  IGHV3-49*04  137  .......A..T.........A..A...CT............A.A..A................A..........ACC.............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      D  S  T  S  I  A  Y  L  Q  M  S  S  L  K  T  D  D  T  G  L  Y  Y  C  S  A  R  G  Y  I  S  
                    Query_10736  181  ATTCCACAAGTATCGCCTATCTGCAGATGAGCAGCCTGAAAACCGACGACACAGGCCTGTATTATTGTTCCGCACGTGGGTACATCTCTG  270
V  87.5% (217/248)  IGHV3-49*04  227  ......A...C..............A....A...............G.......C.G.......C...----------------------  294
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  100.0% (6/6)     IGHD1-1*01   1    ------------------------------------------------------------------------------......------  6

                                      GT-------------->                                  
                                      G  V  L  F  D  Y  W  G  Q  G  A  L  V  S  V  S  S  
                    Query_10736  271  GTGTGCTCTTTGACTACTGGGGCCAGGGAGCCCTGGTCAGTGTCTCCTCAG  321
J  93.2% (41/44)    IGHJ4*02     5    -------......................A.........CC..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_291145

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           374     8e-106
IGHD5-12*01                                                                                           37.2    1e-06 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGCAAAGCAAGGAA	GGATATAGTGGCTACGATT	C	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGCAAAGCAAGGAAGGATATAGTGGCTACGATTCCTACTACGGTATGGACGTC	ARVQSKEGYSGYDSYYGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	244	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10737  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGCTTCAGTACTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.0% (244/249)  IGHV3-33*01  47   ....................................C........GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10737  91   AGTGGGTGTCAGTTATATGGTATGATGGAAGTAATAAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  98.0% (244/249)  IGHV3-33*01  137  ........G...............................C.................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  Q  S  K  E  G  Y  
                    Query_10737  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGTGCAAAGCAAGGAAGGATATA  270
V  98.0% (244/249)  IGHV3-33*01  227  .....................................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (19/19)   IGHD5-12*01  3    -----------------------------------------------------------------------------------.......  9

                                      R3-IMGT------------------------>                                 
                                      S  G  Y  D  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10737  271  GTGGCTACGATTCCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  100.0% (19/19)   IGHD5-12*01  10   ............-----------------------------------------------------  21
J  100.0% (52/52)   IGHJ6*02     11   -------------....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_162913

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           445     2e-127
IGHD3-3*01                                                                                            41.1    8e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACGCCT	CGATTTTTGGAGTGGTTATTGTAC	GAGAATCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTAC	ARYASIFGVVIVRESFDY	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	287	2	0	99.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_10738  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  99.3% (287/289)  IGHV5-51*01  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_10738  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACTAGATACAGCCC  180
V  99.3% (287/289)  IGHV5-51*01  96   ............................................................T.................C...........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_10738  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  99.3% (287/289)  IGHV5-51*01  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  Y  A  S  I  F  G  V  V  I  V  R  E  S  F  D  Y  W  G  Q  G  T  L  V  T
                    Query_10738  271  CATGTATTACTGTGCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTACTGGGGCCAGGGAACCCTGGTCAC  360
V  99.3% (287/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  95.8% (23/24)    IGHD3-3*01   7    --------------------------....................A...----------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    ----------------------------------------------------------................................  37

                                                 
                                        V  S  S  
                    Query_10738  361  CGTCTCCTCAG  371
J  100.0% (43/43)   IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_162910

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           321     7e-90
IGHD2-21*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TAATCCCGACGA	TGGTGGTG	CCTACAATTATCCTAACG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAATCCCGACGATGGTGGTGCCTACAATTATCCTAACGAC	ASNPDDGGAYNYPND	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10739  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTTCCTATGGCATGCACTGGGTCCGCCAGGCTCCTGGCAAGGGGCTGG  90
V  91.5% (226/247)  IGHV3-33*01  47   ............................................AG..............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  F  E  D  G  S  E  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10739  91   AGTGGGTGGCTTTTATATTCGAAGATGGAAGTGAAACATACTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGGGACAATTCCA  180
V  91.5% (226/247)  IGHV3-33*01  137  ..........AG......GGT.T.........A.T.A........C.................................A..........  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  T  L  Y  L  H  L  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  S  N  P  D  D  G  G  A  
                    Query_10739  181  GGAACACACTCTATCTGCATCTGAACGGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGTAATCCCGACGATGGTGGTGCCT  270
V  91.5% (226/247)  IGHV3-33*01  227  A......G..G........AA.....A.........................G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD2-21*01  10   -------------------------------------------------------------------------------........---  17

                                      ---------------->                                  
                                      Y  N  Y  P  N  D  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10739  271  ACAATTATCCTAACGACTGGGGCCGGGGAACCCTGGTCACCGTCTCTTCAG  321
J  94.4% (34/36)    IGHJ4*02     13   ---------------.........A.....................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_162911

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            372     2e-105
IGHD3-22*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACAG	ATGATAGT	GGACCTAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACAGATGATAGTGGACCTAGTGACTCC	ARTDDSGPSDS	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	112	2	0	98.2
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	242	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10740  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  98.4% (242/246)  IGHV4-4*02   49   ..........................................................................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  G  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_10740  91   GAATGGATTGGGGAAATCTATCATAGTGGGGGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCGGTAGACAAGTCCAAG  180
V  98.4% (242/246)  IGHV4-4*02   139  ..G...........................A...........................................A...............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  D  D  S  G  P  S  D 
                    Query_10740  181  AACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAACAGATGATAGTGGACCTAGTGAC  270
V  98.4% (242/246)  IGHV4-4*02   229  ......................G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD3-22*01  9    ----------------------------------------------------------------------........------------  16
J  95.1% (39/41)    IGHJ4*02     8    --------------------------------------------------------------------------------------....  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10740  271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCATCAG  307
J  95.1% (39/41)    IGHJ4*02     12   .A..............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_162917

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           318     6e-89
IGHD2-8*01                                                                                            19.9    0.16 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGAGGGTA	ATATTATACTTCTGATGTATGC	CCCGCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCGGAGGGTAATATTATACTTCTGATGTATGCCCCGCCTGACTTC	ARAEGNIILLMYAPPDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  R  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10741  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCGTTCAGTAGATACACCATGAACTGGGTCCGCCAGGCTCCTGGGAAGGGCCTGG  90
V  90.8% (226/249)  IGHV3-21*01  47   ...................................A.C........C..T.G........................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  D  S  N  T  I  Y  Y  T  D  S  V  K  G  R  F  S  I  S  R  D  N  A  
                    Query_10741  91   AGTGGGTCTCATCTATTAGTGGCGATAGTAATACCATATACTACACAGACTCGGTGAAGGGCCGATTCAGCATCTCCAGAGACAACGCCA  180
V  90.8% (226/249)  IGHV3-21*01  137  .............C......A.TAG.....G.TA..........G.......A................C....................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  F  L  Q  M  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  E  G  N  I  I  L  
                    Query_10741  181  AGAACTCACTGTTTCTTCAAATGCACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGCGAGCGGAGGGTAATATTATACTTC  270
V  90.8% (226/249)  IGHV3-21*01  227  ............A...G......A............................G............A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  81.8% (18/22)    IGHD2-8*01   4    ------------------------------------------------------------------------------.....G....AA  15

                                      GT-------------------->                                  
                                      L  M  Y  A  P  P  D  F  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_10741  271  TGATGTATGCCCCGCCTGACTTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  327
D  81.8% (18/22)    IGHD2-8*01   16   ..G.......-----------------------------------------------  25
J  95.1% (39/41)    IGHJ4*02     8    ----------------.....A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_162914

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           293     2e-81
IGHD6-13*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTCTCGCCACAGAA	AGCAGCAGCT	ATAACTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCTCGCCACAGAAAGCAGCAGCTATAACTTACTACTTTGACTAC	ARVSPQKAAAITYYFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	220	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_10742  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (220/249)  IGHV4-34*12  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_10742  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (220/249)  IGHV4-34*12  133  .....G...................A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  P  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  V  S  P  Q  K  A  A 
                    Query_10742  181  AAGAACCAGTTCTCCCCGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGTCTCGCCACAGAAAGCAGCA  270
V  88.4% (220/249)  IGHV4-34*12  223  ................T...GC............C........................C.........---------------------  291
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (10/10)   IGHD6-13*01  7    -----------------------------------------------------------------------------------.......  13

                                      MGT-------------------->                                  
                                       A  I  T  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10742  271  GCTATAACTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  100.0% (10/10)   IGHD6-13*01  14   ...-------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ----------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_162915

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           420     7e-120
IGHD1-20*01                                                                                           29.5    2e-04 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-20*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGAAAA	TATAACTGGAACGAC	GGAAT	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATC	ARVGKYNWNDGIAFDI	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	282	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N 
                    Query_10743  3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAAC  92
V  95.6% (282/295)  IGHV1-69*01  1    .......................G.......................C........................................G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  F  A  V  N  W  V  R  Q  A  P  G  H  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  K  Y 
                    Query_10743  93   AGCTTTGCTGTCAACTGGGTGCGACAGGCCCCTGGACATGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAACAAAATAC  182
V  95.6% (282/295)  IGHV1-69*01  91   ....A....A...G........................A..........................................G....C...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  V  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_10743  183  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGGACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGAC  272
V  95.6% (282/295)  IGHV1-69*01  181  ..................................................C....C..................................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  V  G  K  Y  N  W  N  D  G  I  A  F  D  I  W  G  Q  G  T  I  V  T 
                    Query_10743  273  ACGGCCGTTTATTATTGTGCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATCTGGGGCCAAGGGACAATAGTCACC  362
V  95.6% (282/295)  IGHV1-69*01  271  ........G.....C..........-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (15/15)   IGHD1-20*01  3    ---------------------------------...............------------------------------------------  17
J  95.7% (45/47)    IGHJ3*02     4    -----------------------------------------------------...T..........................G......  40

                                                
                                       V  S  S  
                    Query_10743  363  GTCTCTTCAG  372
J  95.7% (45/47)    IGHJ3*02     41   ..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_20871

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     2e-87
IGHD6-19*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GACTGTTAAACCCAAA	CAGTGGCTGG	GGGGACGGTTCTACTCTCG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGACTGTTAAACCCAAACAGTGGCTGGGGGGACGGTTCTACTCTCGCTACGGTATGGACGTC	AKETVKPKQWLGGRFYSRYGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  E  A  T  F  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10744  1    GGTCCCTGAGACTCTCCTGTGAAGGCTCTGAAGCCACCTTTAGTAGCTATGCCATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-23*01  47   .....................C..C.....G.TT.........C.............GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  R  N  G  G  T  A  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10744  91   AGTGGGTCTCGGCTATTAGTCGCAATGGTGGCACTGCATACTACGCAGACTCCGTGAAGGGCCGATTCACCATTTCCAGAGACAATTCCA  180
V  90.0% (225/250)  IGHV3-23*01  137  ..........A.........G.T.G......T.GCA............................G........C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      M  N  T  V  F  L  H  M  S  S  L  R  P  E  D  T  A  I  Y  Y  C  A  K  E  T  V  K  P  K  Q  
                    Query_10744  181  TGAACACGGTGTTTCTGCACATGAGCAGCCTGAGACCCGAGGACACGGCCATATATTACTGTGCGAAAGAGACTGTTAAACCCAAACAGT  270
V  90.0% (225/250)  IGHV3-23*01  227  A.......C...A......A....A..........G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD6-19*01  9    --------------------------------------------------------------------------------------....  12

                                      --CDR3-IMGT----------------------------->                             
                                      W  L  G  G  R  F  Y  S  R  Y  G  M  D  V  W  G  Q  G  T  T  V  A  V  S
                    Query_10744  271  GGCTGGGGGGACGGTTCTACTCTCGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTC  340
D  100.0% (10/10)   IGHD6-19*01  13   ......----------------------------------------------------------------  18
J  97.8% (44/45)    IGHJ6*02     14   -------------------------.....................................A.......  58


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_92030

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*14                                                                                           411     5e-117
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*14	IGHD3-10*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCGTGGGAA	GGTTCGGGGAATTAT	CCCTTGGCAA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCGTGGGAAGGTTCGGGGAATTATCCCTTGGCAAAC	AAWEGSGNYPLAN	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	291	3	3	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  I  S  C  K  A  S  G  G  T  F  S 
                    Query_10745  1    CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGATCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  90
V  95.2% (277/291)  IGHV1-69*14  1    ...........G.............................................G................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  S  A  I  T  W  V  R  Q  A  P  G  *  G  L  G  W  M  G  G  I  I  P  I  F  D  T  A  N  Y 
                    Query_10745  91   AGCTCTGCTATCACCTGGGTGCGACAGGCCCCTGGATAAGGGCTTGGGTGGATGGGAGGGATCATCCCTATCTTTGATACAGCAAATTAC  180
V  95.2% (277/291)  IGHV1-69*14  91   ....A........G......................C.........A.............................G.........C...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  R  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  D  S  M  E  L  R  S  L  S  S  E  D 
                    Query_10745  181  GCACAGAGGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGACTCCATGGAGCTGCGCAGCCTGAGCTCTGAGGAC  270
V  95.2% (277/291)  IGHV1-69*14  181  .......A...............................................C..A..........A..........A.........  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  C  C  A  A  W  E  G  S  G  N  Y  P  L  A  N  W  G  P  G  T  L  V  T  V  S  S 
                    Query_10745  271  ACGGCCGTGTATTGCTGTGCGGCGTGGGAAGGTTCGGGGAATTATCCCTTGGCAAACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCA  360
V  95.2% (277/291)  IGHV1-69*14  271  .............A.......---------------------------------------------------------------------  291
                                       T  A  V  Y  Y  C  A                                                                      
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------..........G....---------------------------------------------  25
J  97.2% (35/36)    IGHJ4*02     13   -------------------------------------------------------.........A.........................  47

                                       
                                       
                    Query_10745  361  G  361
J  97.2% (35/36)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_20873

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         383     1e-108
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGCACTAT	TATGCTAGCAGTGGTTATT	T	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGCACTATTATGCTAGCAGTGGTTATTTCTACTTTGACTAC	ARGHYYASSGYFYFDY	267	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	80	30	29	1	0	96.7
FR2-IMGT	81	131	51	49	2	0	96.1
CDR2-IMGT	132	152	21	19	2	0	90.5
FR3-IMGT	153	266	114	109	5	0	95.6
CDR3-IMGT (germline)	267	271	5	5	0	0	100
Total	N/A	N/A	271	258	13	0	95.2


Alignments

                                        <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                           G  L  V  K  P  S  Q  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  
                    Query_10746    1    CAGGACTGGTGAAGCCCTCGCAGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGA  90
V  95.2% (258/271)  IGHV4-30-4*01  26   ................T..A.....................A..............................A.................  115
                                           G  L  V  K  P  S  Q  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  

                                        -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                        I  R  Q  P  P  G  K  G  L  E  W  I  G  R  I  Y  Y  N  G  R  T  Y  Y  S  P  S  L  K  S  R  
                    Query_10746    91   TCCGCCAGCCCCCAGGGAAGGGCCTGGAGTGGATTGGGCGCATCTATTACAATGGGAGGACCTATTACAGCCCGTCCCTCAAGAGTCGAG  180
V  95.2% (258/271)  IGHV4-30-4*01  116  ......................................TA...........G......C.....C....A....................  205
                                        I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                        -------------------------FR3-IMGT----------------------------------------------------><---
                                        V  T  I  S  V  D  T  S  K  N  Q  F  S  L  M  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  
                    Query_10746    181  TTACCATATCAGTGGACACGTCCAAGAACCAGTTCTCCCTGATGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTTCTGTGCCA  270
V  95.2% (258/271)  IGHV4-30-4*01  206  .............A............................A......................................A........  295
                                        V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                        ----------------CDR3-IMGT------------------>                                  
                                        R  G  H  Y  Y  A  S  S  G  Y  F  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10746    271  GGGGGCACTATTATGCTAGCAGTGGTTATTTCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  348
V  95.2% (258/271)  IGHV4-30-4*01  296  .-----------------------------------------------------------------------------  296
                                                                                                                      
D  89.5% (17/19)    IGHD3-22*01    8    -----------....A...T..........------------------------------------------------  26
J  100.0% (47/47)   IGHJ4*02       2    -------------------------------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_20875

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           291     6e-81
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCACCGGTGG	AGCAATGGCTGG	GGAACA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCACCGGTGGAGCAATGGCTGGGGAACATACTATAACTACGGTATGGACGCC	ARGHRWSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	21	3	6	70
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	219	23	6	88.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  T  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_10747  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGCCCTTCACTGACAGTGGTTATTATTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.3% (219/248)  IGHV4-34*12  49   .......................C..T......T......------.......C..C....G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  I  I  S  I  D  T  S 
                    Query_10747  91   CTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAACCCGTCCCTCCAGAGTCGAGTCATCATATCAATAGACACGTCC  180
V  88.3% (219/248)  IGHV4-34*12  133  .....G.............T.......AG.....G......................A............C.......G...........  222
                                       L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  K  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  W  S  N  G 
                    Query_10747  181  AAGAAGCAGTTCTCCCTGAAATTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTATTGTGCGAGGGGCCACCGGTGGAGCAATGGC  270
V  88.3% (219/248)  IGHV4-34*12  223  .....C..............GC...............................G.....C........----------------------  290
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_10747  271  TGGGGAACATACTATAACTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.2% (52/57)    IGHJ6*02     6    ---------.....CT...............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_92031

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*05                                                                                           346     2e-97
IGHD3-10*01                                                                                           33.4    1e-05
IGHJ1*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*05	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GAG	ACTATGGCTCGGGGAGTTAT	CCCCTTG	AGCAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGGAGACTATGGCTCGGGGAGTTATCCCCTTGAGCAC	TTGDYGSGSYPLEH	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	238	17	0	93.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  V  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10748  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTGTCAGTGTCGCCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.3% (238/255)  IGHV3-15*05  47   .......T..............................T.....AA...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  D  R  F  T  I  S  R  N  
                    Query_10748  91   AGTGGGTTGGCCGTATTAAGAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAGGACAGATTCACCATCTCAAGAAATG  180
V  93.3% (238/255)  IGHV3-15*05  137  ...................A............................................A.G...................G...  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  N  T  V  H  L  Q  M  N  S  V  K  T  E  D  T  A  V  Y  Y  C  T  T  G  D  Y  G  S  
                    Query_10748  181  ATTCAAAAAACACAGTACACCTGCAAATGAACAGTGTGAAGACCGAGGACACAGCCGTGTATTATTGTACCACAGGAGACTATGGCTCGG  270
V  93.3% (238/255)  IGHV3-15*05  227  .............GC.GT.T...............C....A.......................C..........---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  95.0% (19/20)    IGHD3-10*01  6    ------------------------------------------------------------------------------.......T....  17

                                      IMGT--------------->                                  
                                      G  S  Y  P  L  E  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10748  271  GGAGTTATCCCCTTGAGCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  95.0% (19/20)    IGHD3-10*01  18   ........----------------------------------------------  25
J  97.4% (38/39)    IGHJ1*01     14   ---------------................C......................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_20878

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           367     6e-104
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10749  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10749  91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.2% (242/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_10749  181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  97.2% (242/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_10749  271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_92032

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           299     3e-83
IGHD1-20*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAACGATTA	TATAACTGGAA	TTCAGTCACAAGGGGTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAACGATTATATAACTGGAATTCAGTCACAAGGGGTGACTACGGTATGGACGTC	ARQRLYNWNSVTRGDYGMDV	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	245	218	27	0	89


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  V  S  T  N  F  V  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10750  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCAGTGTCAGTACCAATTTCGTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.0% (218/245)  IGHV3-53*01  47   ....................................CC.......G...C.A.A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  M  F  S  G  G  A  T  Y  Y  A  D  S  V  E  G  R  F  T  V  S  R  D  T  S  K  
                    Query_10750  91   AGTGGGTCTCAGTTATGTTTAGTGGTGGTGCCACCTACTACGCAGACTCCGTGGAGGGCCGATTCACCGTCTCCAGAGACACTTCCAAGA  180
V  89.0% (218/245)  IGHV3-53*01  137  ................T.A...C......AG...A..................A..............A............A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------------CDR3-
                                      N  S  L  D  L  E  M  N  N  L  R  V  D  D  T  A  V  Y  Y  C  A  R  Q  R  L  Y  N  W  N  S  
                    Query_10750  181  ACTCGTTGGATCTTGAGATGAATAACCTGAGAGTCGACGACACGGCCGTCTATTATTGTGCGAGACAACGATTATATAACTGGAATTCAG  270
V  89.0% (218/245)  IGHV3-53*01  227  ..A..C..T.....C.A.....C.G........C...G...........G.....C.........-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD1-20*01  3    --------------------------------------------------------------------------...........-----  13

                                      IMGT------------------------>                                 
                                      V  T  R  G  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10750  271  TCACAAGGGGTGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  100.0% (50/50)   IGHJ6*02     13   ------------..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_30466

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           424     9e-121
IGHD3-3*01                                                                                            21.8    0.048 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GACGCCGAC	TTTGGAGTGGT	CCGGAGGGA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGACGCCGACTTTGGAGTGGTCCGGAGGGATACTACTACTACGATATGGACGTC	ATGRRLWSGPEGYYYYDMDV	289	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	71	0	0	100
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	295	7	6	1	0	85.7
Total	N/A	N/A	291	281	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  N  
                    Query_10751  5    TGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAACT  94
V  96.6% (281/291)  IGHV1-69*01  5    .......................................................................................G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      F  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  V  F  G  T  A  N  Y  A  
                    Query_10751  95   TTGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTGTCTTTGGAACAGCAAACTACGCAC  184
V  96.6% (281/291)  IGHV1-69*01  95   A................................................................A.......T................  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  L  Q  G  R  V  T  I  S  A  D  E  S  T  S  A  A  Y  M  E  L  S  S  L  R  S  E  D  T  
                    Query_10751  185  AGAAGTTGCAGGGCAGAGTCACGATTAGCGCGGACGAATCCACGAGCGCAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGG  274
V  96.6% (281/291)  IGHV1-69*01  185  .......C...................C...................A..........................................  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-------------------------CDR3-IMGT------------------------>                
                                      A  V  H  Y  C  A  T  G  R  R  L  W  S  G  P  E  G  Y  Y  Y  Y  D  M  D  V  W  G  Q  G  T  
                    Query_10751  275  CCGTGCATTATTGTGCGACAGGACGCCGACTTTGGAGTGGTCCGGAGGGATACTACTACTACGATATGGACGTCTGGGGCCAAGGGACCG  364
V  96.6% (281/291)  IGHV1-69*01  275  .....T....C.......G..---------------------------------------------------------------------  295
                                      A  V  Y  Y  C  A  R                                                                       
D  100.0% (11/11)   IGHD3-3*01   12   ------------------------------...........-------------------------------------------------  22
J  96.5% (55/57)    IGHJ6*02     6    --------------------------------------------------.............G.........................A  45

                                                       
                                      A  V  T  V  S  S 
                    Query_10751  365  CGGTCACCGTCTCCTCA  381
J  96.5% (55/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_314148

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           330     9e-93
IGHD3-10*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	N/A	CGGGGAG	GAGGGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGCGGGGAGGAGGGCTTC	ASGEEGF	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	229	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  Y  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10752  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTGACTACTATATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (229/247)  IGHV3-11*06  47   ....................................C...............C....G....A...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  R  S  S  T  H  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10752  91   AGTGGGTTTCACATATTAGTAGAAGTAGTACTCACACAAACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.7% (229/247)  IGHV3-11*06  137  ...........T.C........T.......G.T..........C..............................................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  Y  L  Q  M  N  S  L  V  T  D  D  T  A  I  Y  Y  C  A  S  G  E  E  G  F  W  G  
                    Query_10752  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGGTAACCGACGACACGGCTATATATTACTGCGCCAGCGGGGAGGAGGGCTTCTGGGGCC  270
V  92.7% (229/247)  IGHV3-11*06  227  ................................AG.G....G.........G.G........T..G..-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-10*01  15   -------------------------------------------------------------------.......----------------  21
J  97.1% (34/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_10752  271  AGGGAACCCTGGTCACCGTGTCCTCAG  297
J  97.1% (34/35)    IGHJ4*02     22   ...................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_314149

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         350     8e-99
IGHD6-13*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGTGGGGTGCGTTATGC	CAGCAGCTGGTAC	GG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTGGGGTGCGTTATGCCAGCAGCTGGTACGGCTAC	ARGGVRYASSWYGY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	235	11	0	95.5


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  L 
                    Query_10753    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCATCAGCAGTGGTTACTACTGGGGCTGGCTCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  95.5% (235/246)  IGHV4-38-2*01  49   ...............................................................A..........................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  T  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  E 
                    Query_10753    91   GAGTGGATTGGGACTATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACTATGTCAGTAGACACGTCCGAG  180
V  95.5% (235/246)  IGHV4-38-2*01  139  .............G.................G....................................C..A...............A..  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  G  G  V  R  Y  A  S  S 
                    Query_10753    181  AACCACTTCTCCCTAAAGCTGAGCTCTGTGACGGCCGCTGACACGGCCGTGTTTTACTGTGCGAGAGGTGGGGTGCGTTATGCCAGCAGC  270
V  95.5% (235/246)  IGHV4-38-2*01  229  .....G........G.................C.....A.............A.............------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-13*01    9    -----------------------------------------------------------------------------------.......  15

                                        ----------->                                
                                         W  Y  G  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_10753    271  TGGTACGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
D  100.0% (13/13)   IGHD6-13*01    16   ......--------------------------------------  21
J  100.0% (36/36)   IGHJ4*02       11   --------....................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_30463

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD6-19*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAGGGAGT	AGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCC	ARAGSSGWLDS	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  T  S  D  Y  W  S  W  I  R  K  P  P  R  K  G  L  E  
                    Query_10754  4    CCCTGAGACTCTCCTGCACTGTCTCTGGGGGCTCCATAACTAGTGACTACTGGAGCTGGATCCGGAAGCCCCCTAGGAAGGGACTGGAGT  93
V  90.9% (221/243)  IGHV4-59*01  50   .....TCC...A................T........C.G....T....................C.......AG...............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  D  Y  N  S  S  L  K  S  R  V  T  I  S  F  D  R  S  K  N  
                    Query_10754  94   GGATTGGATATATCTATTACAGTGGGAGCACCGACTACAATTCCTCCCTCAAGAGTCGAGTCACCATATCATTTGACAGGTCCAAGAACC  183
V  90.9% (221/243)  IGHV4-59*01  140  .......G........................A.......CC.............................G.A....C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  S  S  G  W  L  D  S  
                    Query_10754  184  AGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCCT  273
V  90.9% (221/243)  IGHV4-59*01  230  ..............C....C..........................G............A...---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (9/9)     IGHD6-19*01  10   -----------------------------------------------------------------------.........----------  18
J  97.5% (39/40)    IGHJ4*02     7    ---------------------------------------------------------------------------------......A..  15

                                                                     
                                      W  G  Q  G  T  L  V  T  V  S  S
                    Query_10754  274  GGGGCCAGGGAACCCTGGTCACCGTCTCCTC  304
J  97.5% (39/40)    IGHJ4*02     16   ...............................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_30462

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           344     6e-97
IGHD6-13*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTGG	GCACCAGCTGG	GCCGGG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTGGGCACCAGCTGGGCCGGGTGACTCC	ARHWAPAGPGDS	267	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	80	30	27	3	0	90
FR2-IMGT	81	131	51	49	2	0	96.1
CDR2-IMGT	132	152	21	16	5	0	76.2
FR3-IMGT	153	266	114	101	13	0	88.6
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	247	27	0	90.1


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  N  L  S  L  I  C  T  V  S  G  A  S  I  S  S  S  H  Y  Y  W  G  W  
                    Query_10755  1    CAGGACTGGTGAAGCCCTCGGAGAACCTGTCCCTCATATGCACTGTCTCTGGTGCCTCCATCAGCAGTAGTCATTACTACTGGGGCTGGA  90
V  90.1% (247/274)  IGHV4-39*01  26   ................T.......C...........CC................G................AG.................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  S  P  G  K  G  L  E  W  I  G  S  I  D  Y  D  G  R  T  F  H  N  P  S  L  K  S  R  
                    Query_10755  91   TCCGCCAGTCCCCAGGGAAGGGCCTGGAGTGGATTGGGAGTATCGATTACGATGGGAGAACCTTCCACAATCCGTCTCTCAAGAGTCGAG  180
V  90.1% (247/274)  IGHV4-39*01  116  ........C.............G.....................T....TAG......C....A.T....C.....C.............  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  V  S  S  D  T  S  K  N  Q  F  S  V  R  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  
                    Query_10755  181  TCACCGTGTCCTCAGACACGTCCAAGAACCAGTTCTCCGTGAGGCTGAGTTCCGTGACCGCCGCAGACACGGCTCTGTATTACTGTGCGA  270
V  90.1% (247/274)  IGHV4-39*01  206  .....A.A...GT.........................C...A......C..T.....................G...............  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------CDR3-IMGT------------>                                  
                                      R  H  W  A  P  A  G  P  G  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10755  271  GACATTGGGCACCAGCTGGGCCGGGTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  336
V  90.1% (247/274)  IGHV4-39*01  296  ....--------------------------------------------------------------  299
                                      R                                                                 
D  90.9% (10/11)    IGHD6-13*01  8    --------...G.......-----------------------------------------------  18
J  95.1% (39/41)    IGHJ4*02     8    -------------------------.....A..............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_30460

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHD5-12*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGCGGGA	TGGCTAC	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGACAGGTGCGGGATGGCTACCTGACTAC	VTGAGWLPDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	5	2	0	71.4
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  G  Y  Y  L  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10756  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTGGTTATTATTTGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*01  49   ......................................C...A....C..C.G..G.................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  L  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_10756  91   TGGCTTGGTTTGATCTCTTACAGCGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAACAAC  180
V  92.2% (225/244)  IGHV4-59*01  139  ...A....G.AT....A......T.....C........................................................G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  V  T  G  A  G  W  L  P  D  Y  W 
                    Query_10756  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCCTGTATTATTGTGTGACAGGTGCGGGATGGCTACCTGACTACTGG  270
V  92.2% (225/244)  IGHV4-59*01  229  .............................................G.......C....C..G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-12*01  11   ------------------------------------------------------------------------.......-----------  17
J  100.0% (41/41)   IGHJ4*02     8    --------------------------------------------------------------------------------..........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_10756  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (41/41)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_314142

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           394     7e-112
IGHD3-3*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	GGAGAGTCTG	CGATTTCTGGAGTGGTTAT	CCCCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTAC	AREESLRFLEWLSPDY	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	72	3	0	96
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	299	8	7	1	0	87.5
Total	N/A	N/A	296	274	22	0	92.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  L  T 
                    Query_10757  4    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTAAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTGACC  93
V  92.6% (274/296)  IGHV1-18*01  1    .....T...............................................G.................T..............T...  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  S  M  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  S  N  I  N  Y 
                    Query_10757  94   AGATATAGTATGTCTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATAGCAACATAAATTAT  183
V  92.6% (274/296)  IGHV1-18*01  91   ..C...G....CAGC....................................................C.......G.T....C...C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  L  L  G  R  V  T  M  T  I  D  T  S  A  N  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_10757  184  GCACAGAAACTCCTGGGCAGAGTCACCATGACCATAGACACATCCGCGAACACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  273
V  92.6% (274/296)  IGHV1-18*01  181  ........G....A....................C..........A...G........................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  E  E  S  L  R  F  L  E  W  L  S  P  D  Y  W  G  Q  G  T  L  V  I 
                    Query_10757  274  ACGGCCGTGTATTATTGTGCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTACTGGGGCCAGGGAACCCTGGTCATC  363
V  92.6% (274/296)  IGHV1-18*01  271  ..............C........A..----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.7% (18/19)    IGHD3-3*01   7    ------------------------------------......T............-----------------------------------  25
J  97.1% (34/35)    IGHJ4*02     9    ------------------------------------------------------------............................C.  38

                                           
                                       V  S
                    Query_10757  364  GTCTC  368
J  97.1% (34/35)    IGHJ4*02     39   .....  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_86114

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           324     8e-91
IGHD3-3*01                                                                                            23.8    0.011
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTCTTTAATG	ACGATTATTGGAGTG	ATGATTTTCGTCGACCCCTAGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCTTTAATGACGATTATTGGAGTGATGATTTTCGTCGACCCCTAGGGCTTGACAAC	ARHVFNDDYWSDDFRRPLGLDN	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	229	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  V  T  A  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_10758  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCTGTCACTGCCAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  91.2% (229/251)  IGHV4-39*01  49   ...............................G...CA...GCAGT............................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  H  T  S 
                    Query_10758  91   CTGGAGTGGATTGGAAATATCTATTATAGTGGGACCACCTACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCCGTGCACACGTCC  180
V  91.2% (229/251)  IGHV4-39*01  139  ..............G.G.................G...............G.......................A.....AG........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  H  V  F  N  D  D  Y 
                    Query_10758  181  AAGAATCAGTTCTCCCTGAGGCTGAATTCTGTGACCGCCGCAGACTCGGCTGTATATTACTGTGCGAGACATGTCTTTAATGACGATTAT  270
V  91.2% (229/251)  IGHV4-39*01  229  .....C.............A.....GC..................A.......G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  93.3% (14/15)    IGHD3-3*01   6    ----------------------------------------------------------------------------------......T.  13

                                      --CDR3-IMGT--------------------------->                                  
                                       W  S  D  D  F  R  R  P  L  G  L  D  N  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_10758  271  TGGAGTGATGATTTTCGTCGACCCCTAGGGCTTGACAACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  343
D  93.3% (14/15)    IGHD3-3*01   14   .......------------------------------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    -------------------------------.....T........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_314140

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           282     4e-78
IGHD3-16*01                                                                                           18.0    0.60 
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACAACG	TATGCTTAT	GTCAGTGCTTGGGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAACGTATGCTTATGTCAGTGCTTGGGGATGATGCTTTTGATGTC	ARRQRMLMSVLGDDAFDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  V  T  T  T  R  Y  S  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_10759  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCGTCACCACTACTAGATACTCCTGGGGTTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  86.0% (215/250)  IGHV4-39*01  49   ...............................G....A...G..G..G...T....A......C..........................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Q  M  F  Y  G  G  S  T  Y  Q  N  P  S  L  N  S  R  V  T  V  S  V  D  P  S 
                    Query_10759  91   CTGGAATGGATTGGGCAGATGTTCTATGGTGGGAGCACGTACCAGAACCCGTCGCTGAATAGTCGAGTCACCGTGTCCGTTGACCCGTCC  180
V  86.0% (215/250)  IGHV4-39*01  139  .....G.........AGT..C.AT...A..........C...T.C........C..C..G............A.A.....A...A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  S  Q  F  F  L  N  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  R  Q  R  M  L  M  S 
                    Query_10759  181  AAGAGTCAGTTCTTCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCTGTATATTATTGTGCGAGACGACAACGTATGCTTATGTCA  270
V  86.0% (215/250)  IGHV4-39*01  229  ....AC.......C......G....G...................A.......G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  26   -----------------------------------------------------------------------------.........----  34

                                      -IMGT--------------------->                                  
                                       V  L  G  D  D  A  F  D  V  W  G  Q  G  T  G  V  T  V  S  S  
                    Query_10759  271  GTGCTTGGGGATGATGCTTTTGATGTCTGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  331
J  96.0% (48/50)    IGHJ3*01     1    -----------...............................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_314141

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           302     3e-84
IGHD3-10*02                                                                                           14.1    8.3  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	CTATGTT	AAGGGGCTCTGATAG	TTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTATGTTAAGGGGCTCTGATAGTTTTAATACT	ATMLRGSDSFNT	250	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	63	36	27	3	6	75
FR2-IMGT	64	114	51	49	2	0	96.1
CDR2-IMGT	115	135	21	18	3	0	85.7
FR3-IMGT	136	249	114	101	13	0	88.6
CDR3-IMGT (germline)	250	253	4	4	0	0	100
Total	N/A	N/A	253	225	22	6	88.9


Alignments

                                      <--------FR1-IMGT---------><-------------CDR1-IMGT------------><--------------------FR2-IM
                                       T  L  S  L  T  C  N  V  S  G  G  S  I  I  I  S  T  N  G  Y  Y  W  G  W  I  R  Q  P  P  G 
                    Query_10760  1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCATCATCATCAGTACAAATGGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGG  90
V  88.9% (225/253)  IGHV4-39*01  49   ...................C....................G..GT....------...................................  132
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S        S  Y  Y  W  G  W  I  R  Q  P  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  G  L  E  W  I  G  T  I  S  H  S  G  T  T  Y  Y  K  A  S  L  K  S  R  V  T  I  S  V  A 
                    Query_10760  91   AAGGGACTGGAGTGGATTGGGACTATCTCTCATAGTGGGACCACCTACTACAAGGCGTCCCTCAAGAGTCGAGTCACCATATCCGTCGCC  180
V  88.9% (225/253)  IGHV4-39*01  133  .....G................G.....A.T.........G............CC...............................A.A.  222
                                       K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-------------CDR3-IM
                                       T  S  K  N  Q  F  S  L  R  V  T  S  V  T  A  A  D  T  A  M  F  Y  C  A  T  M  L  R  G  S 
                    Query_10760  181  ACGTCGAAAAATCAGTTCTCCCTGAGGGTGACCTCTGTGACCGCCGCAGACACGGCTATGTTTTATTGTGCGACTATGTTAAGGGGCTCT  270
V  88.9% (225/253)  IGHV4-39*01  223  .....C..G..C.............A.C...G.........................G...A...C.......-----------------  295
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                   
D  100.0% (7/7)     IGHD3-10*02  7    -------------------------------------------------------------------------.......----------  13

                                      GT------------>                                  
                                       D  S  F  N  T  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10760  271  GATAGTTTTAATACTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  319
J  93.2% (41/44)    IGHJ3*02     7    -----....G...TC..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_314146

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           357     1e-100
IGHD6-13*01                                                                                           21.8    0.041 
IGHJ3*01                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  L  S  G  G  S  I  S  S  G  G  F  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_10761  1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGGCTCCATCAGCAGTGGTGGTTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.6% (239/250)  IGHV4-31*03  49   .....................G..............................A........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_10761  91   CTGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCT  180
V  95.6% (239/250)  IGHV4-31*03  139  .....................T..................A.................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V 
                    Query_10761  181  AAGAACCAATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTA  270
V  95.6% (239/250)  IGHV4-31*03  229  ........G..........A.....GC...............................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD6-13*01  11   ------------------------------------------------------------------------...........-------  21

                                      ----------------->                                  
                                       G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10761  271  GGCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  98.0% (48/49)    IGHJ3*01     2    ---.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_314147

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            282     4e-78
IGHD1-1*01                                                                                            14.1    9.9  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGAAATGT	TGGAACG	GGGTCCTTCCAAGAGCGATGTGCCCCCTTCGGGCTACTCGTCTTCTGTGCCATATCATAGCGACTTTTAT	GGTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACGAAATGTTGGAACGGGGTCCTTCCAAGAGCGATGTGCCCCCTTCGGGCTACTCGTCTTCTGTGCCATATCATAGCGACTTTTATGGTTTGGACGTC	ARDEMLERGPSKSDVPPSGYSSSVPYHSDFYGLDV	243	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	15	9	0	62.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  R  W  S  S  M  T  W  V  R  Q  A  P  G  T  G  L  
                    Query_10762  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCAATTTTAGATGGAGTTCCATGACCTGGGTCCGCCAGGCCCCAGGGACGGGGCTGG  90
V  86.0% (215/250)  IGHV3-7*03   47   ....................G...............CC.....TA.CTA..GG....G...............T.......A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  E  G  G  R  P  T  F  Y  G  D  S  V  K  G  R  F  A  I  S  R  D  N  S  
                    Query_10762  91   AGTGGGTGGCCAACATAAACGAGGGTGGACGTCCGACATTCTATGGGGACTCTGTGAAGGGCCGATTCGCCATCTCCAGAGACAATTCCA  180
V  86.0% (215/250)  IGHV3-7*03   137  ...................GC.A.A....A..GA..A..A.....T......................A................CG...  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  I  Y  Y  C  A  R  D  E  M  L  E  R  G  
                    Query_10762  181  AGAACTCGCTATATCTGCAAATGGACAGCCTGAGAGTCGAAGACACGGCCATATATTACTGCGCGCGAGACGAAATGTTGGAACGGGGTC  270
V  86.0% (215/250)  IGHV3-7*03   227  .......A..G............A............C...G.........G.G........T...A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-1*01   9    ------------------------------------------------------------------------------.......-----  15

                                      --------------------CDR3-IMGT----------------------------------------------->             
                                      P  S  K  S  D  V  P  P  S  G  Y  S  S  S  V  P  Y  H  S  D  F  Y  G  L  D  V  W  G  Q  G  
                    Query_10762  271  CTTCCAAGAGCGATGTGCCCCCTTCGGGCTACTCGTCTTCTGTGCCATATCATAGCGACTTTTATGGTTTGGACGTCTGGGGCCAAGGGA  360
J  97.6% (41/42)    IGHJ6*02     18   -----------------------------------------------------------------...A.....................  42

                                                       
                                      T  T  V  T  V  S 
                    Query_10762  361  CCACGGTCACCGTCTCC  377
J  97.6% (41/42)    IGHJ6*02     43   .................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_314144

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           324     8e-91
IGHD3-3*01                                                                                            23.8    0.011
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTCTTTAATG	ACGATTATTGGAGTG	ATGATTTTCGTCGACACCTAGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCTTTAATGACGATTATTGGAGTGATGATTTTCGTCGACACCTAGGGCTTGACAAC	ARHVFNDDYWSDDFRRHLGLDN	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	229	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  V  T  A  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_10763  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCTGTCACTGCCAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  91.2% (229/251)  IGHV4-39*01  49   ...............................G...CA...GCAGT............................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  H  T  S 
                    Query_10763  91   CTGGAGTGGATTGGAAATATCTATTATAGTGGGACCACCTACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCCGTGCACACGTCC  180
V  91.2% (229/251)  IGHV4-39*01  139  ..............G.G.................G...............G.......................A.....AG........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  H  V  F  N  D  D  Y 
                    Query_10763  181  AAGAATCAGTTCTCCCTGAGGCTGAATTCTGTGACCGCCGCAGACTCGGCTGTATATTACTGTGCGAGACATGTCTTTAATGACGATTAT  270
V  91.2% (229/251)  IGHV4-39*01  229  .....C.............A.....GC..................A.......G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  93.3% (14/15)    IGHD3-3*01   6    ----------------------------------------------------------------------------------......T.  13

                                      --CDR3-IMGT--------------------------->                                  
                                       W  S  D  D  F  R  R  H  L  G  L  D  N  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_10763  271  TGGAGTGATGATTTTCGTCGACACCTAGGGCTTGACAACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  343
D  93.3% (14/15)    IGHD3-3*01   14   .......------------------------------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    -------------------------------.....T........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_30468

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           265     5e-73
IGHD5-12*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCCAACACGCCG	GTGGCAACGA	GTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCCAACACGCCGGTGGCAACGAGTTT	AGQHAGGNEF	242	271	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	18	28	11	11	0	0	100
CDR1-IMGT	29	52	24	20	4	0	83.3
FR2-IMGT	53	103	51	45	6	0	88.2
CDR2-IMGT	104	127	24	18	6	0	75
FR3-IMGT	128	241	114	101	13	0	88.6
CDR3-IMGT (germline)	242	244	3	3	0	0	100
Total	N/A	N/A	227	198	29	0	87.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  I  F  S  T  F  E  M  I  W  V  R  Q  P  P  G  K  G  L  G  W  V  S  K  I  
                    Query_10764  18   GTGCAGCCTCTGGATTCATCTTCAGCACTTTTGAAATGATCTGGGTCCGCCAGCCTCCAGGGAAGGGCCTGGGGTGGGTTTCAAAGATTA  107
V  87.2% (198/227)  IGHV3-48*03  65   ..................C......T.G..A........A.............G.............G....A..........T.C....  154
                                         A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  R  S  G  S  D  T  S  Y  A  V  S  V  K  G  R  F  T  V  S  R  D  N  A  K  N  S  L  F  L  
                    Query_10764  108  GTCGGAGTGGTAGTGACACTTCCTATGCAGTCTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCAAGAACTCACTGTTTCTCC  197
V  87.2% (198/227)  IGHV3-48*03  155  ..A.T.........AC..TA.A...C....A......................A..............................A...G.  244
                                      S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------CDR3-IMGT--------->                
                                      Q  M  S  S  L  R  V  G  D  S  G  L  Y  Y  C  A  G  Q  H  A  G  G  N  E  F  W  G  Q  G  A  
                    Query_10764  198  AAATGAGCAGCCTGAGAGTCGGGGACAGCGGTCTTTATTACTGTGCGGGCCAACACGCCGGTGGCAACGAGTTTTGGGGCCAGGGAGCCC  287
V  87.2% (198/227)  IGHV3-48*03  245  ......A...........C..A.....CG.C.G..............-------------------------------------------  291
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  90.0% (9/10)     IGHD5-12*01  10   ------------------------------------------------------------.....T....--------------------  19
J  94.1% (32/34)    IGHJ4*02     15   --------------------------------------------------------------------------............A...  30

                                                        
                                      L  V  T  V  S  S  
                    Query_10764  288  TGGTCACCGTTTCCTCAG  305
J  94.1% (32/34)    IGHJ4*02     31   ..........C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_224564

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           355     3e-100
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_10765  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGCC  93
V  96.0% (237/247)  IGHV4-31*03  50   .....TCC...A.....................C......C.............................C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_10765  94   TGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  96.0% (237/247)  IGHV4-31*03  140  ....G.........T.C.........................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  
                    Query_10765  184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCG  273
V  96.0% (237/247)  IGHV4-31*03  230  ...................................................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  100.0% (51/51)   IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10765  274  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (51/51)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_224565

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           315     5e-88
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCCGCCGC	TTCGGGGA	CTTGACCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCCGCCGCTTCGGGGACTTGACCCTTGACTAC	ARDGRRFGDLTLDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	14	7	0	66.7
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	224	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  L  S  V  S  S  N  Y  M  S  W  F  R  Q  P  P  G  K  G  L  
                    Query_10766  1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGGCTCAGCGTCAGTAGCAACTACATGAGCTGGTTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  90.7% (224/247)  IGHV3-53*01  47   ........................C.......T...C.........................G........G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  L  Y  S  G  G  V  T  F  F  A  D  S  V  K  G  R  F  T  I  S  R  G  D  S  R  
                    Query_10766  91   AGTGGGTCTCAGTTCTTTATAGTGGAGGAGTCACGTTCTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGGCGATTCCAGGA  180
V  90.7% (224/247)  IGHV3-53*01  137  ..............A.......C..T..TAG...A.A..A......................................A.A......A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  F  C  A  R  D  G  R  R  F  G  D  L  
                    Query_10766  181  ACACATTGTATCTTCAAATGAACAACCTCAGAGCCGAGGACACGGCCGTCTATTTCTGTGCGAGAGATGGCCGCCGCTTCGGGGACTTGA  270
V  90.7% (224/247)  IGHV3-53*01  227  ....GC..................G...G....................G....A............-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  13   -----------------------------------------------------------------------------........-----  20

                                      ---------->                                  
                                      T  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10766  271  CCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (42/42)   IGHJ4*02     7    ---..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_224566

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           353     9e-100
IGHD3-22*01                                                                                           14.1    8.4   
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGA	TATGATGGTA	ATGATAAAGC	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGATATGATGGTAATGATAAAGCTGCTTTTGACATC	AREGYDGNDKAAFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10767  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAGATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-48*03  47   ....................................................A.....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  T  T  G  G  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_10767  91   AGTGGATTTCATATATTAGTACTACTGGTGGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  95.2% (238/250)  IGHV3-48*03  137  .....G.......C.......G..G....A........................................................G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  G  Y  D  G  N  D  
                    Query_10767  181  AGAACTCACTATTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTGCGAGAGAGGGATATGATGGTAATGATA  270
V  95.2% (238/250)  IGHV3-48*03  227  ..........G.A.....................................G.......C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-22*01  8    --------------------------------------------------------------------------......A...------  17

                                      ---------------->                                  
                                      K  A  A  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_10767  271  AAGCTGCTTTTGACATCTGGGGCCAAGGGACAATGGTCATCGTCTCTTCAG  321
J  95.7% (45/47)    IGHJ3*02     4    ----.........T.........................C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_224567

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           313     2e-87
IGHD3-10*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAC	TGGAGGGGGCTTCGGGACAG	TATTATAAC	GGACGGCGGGGGAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACTGGAGGGGGCTTCGGGACAGTATTATAACGGACGGCGGGGGATTATGGACGTC	ATLEGASGQYYNGRRGIMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  S  N  T  Y  Y  W  A  W  V  R  Q  S  P  G  K  G 
                    Query_10768  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGAAGCAACACTTACTACTGGGCCTGGGTCCGCCAGTCCCCAGGGAAGGGG  90
V  90.0% (225/250)  IGHV4-39*01  49   ...............................G.........C..T.GT.G...........G....A........C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  A  I  H  Y  R  G  N  T  Y  Y  K  S  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_10768  91   CTGGAGTGGATTGGGGCTATCCATTATAGAGGGAACACCTACTACAAGTCGTCCCTCAAGAGTCGAGTCACCATGTCCGTGGACACGTCC  180
V  90.0% (225/250)  IGHV4-39*01  139  ...............AG....T.......T....G............CC.........................A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  N  L  G  S  V  T  V  A  D  T  S  V  Y  Y  C  A  T  L  E  G  A  S  G  Q 
                    Query_10768  181  AAGAACCAGTTCTCCCTGAACCTGGGGTCTGTGACCGTCGCAGACACGTCTGTGTATTATTGTGCGACACTGGAGGGGGCTTCGGGACAG  270
V  90.0% (225/250)  IGHV4-39*01  229  ....................G...A.C..........C..........G..........C.......G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      DR3-IMGT------------------------>                                 
                                       Y  Y  N  G  R  R  G  I  M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_10768  271  TATTATAACGGACGGCGGGGGATTATGGACGTCTGGGGCCAAGGGGCCACGGTCACCGTCTCCTCA  336
D  100.0% (9/9)     IGHD3-10*01  23   .........---------------------------------------------------------  31
J  97.7% (42/43)    IGHJ6*02     20   -----------------------......................A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_224560

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD2-2*02                                                                                            14.1    8.4  
IGHJ3*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGGGCCCTAGAAG	GCTATAC	AGAG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGCCCTAGAAGGCTATACAGAGGCTTTTGATATC	ARGGALEGYTEAFDI	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  N  Y  Y  W  S  W  M  R  Q  P  P  G  K  G  L  E  
                    Query_10769  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAATAATTACTACTGGAGCTGGATGCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  90.9% (221/243)  IGHV4-59*01  50   .....TCC...A....C......................G..G..................C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  C  F  Y  Y  G  G  N  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  G  T  S  K  N  
                    Query_10769  94   GGATTGGGTGTTTCTATTACGGTGGAAACACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTGGGCACGTCCAAGAACC  183
V  90.9% (221/243)  IGHV4-59*01  140  .........A.A........A....G.G....A..................................A.....A.A..............  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  N  S  L  T  S  A  D  T  A  V  Y  Y  C  A  R  G  G  A  L  E  G  Y  T  E  
                    Query_10769  184  AGTTCTCCCTGAAGCTGAACTCTCTGACGTCTGCGGACACGGCCGTATATTACTGTGCGAGAGGGGGGGCCCTAGAAGGCTATACAGAGG  273
V  90.9% (221/243)  IGHV4-59*01  230  ..................G....G....CG................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (7/7)     IGHD2-2*02   24   ------------------------------------------------------------------------------.......-----  30
J  95.7% (44/46)    IGHJ3*02     5    -----------------------------------------------------------------------------------------.  5

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  A  V  T  V  S  S  
                    Query_10769  274  CTTTTGATATCTGGGGCCAAGGGACAGCGGTCACCGTCTCTTCAG  318
J  95.7% (44/46)    IGHJ3*02     6    ..........................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_224561

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            341     5e-96
IGHD3-16*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TTGGCCCCGGATTCAGATATATGGGG	TTGGGGGAG	N/A	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATATTGGCCCCGGATTCAGATATATGGGGTTGGGGGAGTAC	ARDIGPGFRYMGLGEY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	252	10	9	1	0	90
Total	N/A	N/A	252	235	17	0	93.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  D  Y  A  M  H  W  F  R  Q  V  P  G  K  G  L  
                    Query_10770  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGAAGATTATGCCATGCATTGGTTCCGGCAAGTTCCAGGGAAGGGCCTGG  90
V  93.3% (235/252)  IGHV3-9*01   47   ...........................................T..............C...G.........C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  S  S  T  K  I  G  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10770  91   AGTGGGTCTCAGGTATTAATTGGAGTAGTACTAAAATAGGCTATGCGGACGCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.3% (235/252)  IGHV3-9*01   137  ..................G.....A....GG..GC...............T.......................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  K  S  L  Y  V  Q  M  N  N  L  R  P  E  D  T  A  L  Y  Y  C  A  R  D  I  G  P  G  F  R  
                    Query_10770  181  AGAAGTCCCTGTATGTACAAATGAACAATCTGAGACCTGAGGACACGGCCTTGTATTACTGTGCAAGAGATATTGGCCCCGGATTCAGAT  270
V  93.3% (235/252)  IGHV3-9*01   227  ....C.........C.G..........G.......G..............................A.....------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                      T------------------>                                  
                                      Y  M  G  L  G  E  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10770  271  ATATGGGGTTGGGGGAGTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  324
D  100.0% (9/9)     IGHD3-16*01  16   --------.........-------------------------------------  24
J  97.3% (36/37)    IGHJ4*02     12   -----------------................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_224562

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           350     9e-99
IGHD2-15*01                                                                                           44.9    5e-09
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	GTTA	GATATTGTGGTGGTGGTAGCTGCTAC	CC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTAGATATTGTGGTGGTGGTAGCTGCTACCCCTACTACTACGGTATGGACGTC	VRYCGGGSCYPYYYGMDV	249	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	30	0	0	100
FR3-IMGT	135	248	114	105	9	0	92.1
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  E  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10771  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGAATTCACTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-15*01  47   .......T......................G................................................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  T  V  K  D  R  F  T  I  S  R  D  
                    Query_10771  91   AGTGGGTTGGCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCAACCGTGAAAGACAGATTCACCATCTCAAGAGATG  180
V  95.2% (236/248)  IGHV3-15*01  137  ........................................................C.........G.......................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  N  T  V  Y  L  Q  M  E  G  L  K  T  E  D  T  A  V  Y  Y  C  V  R  Y  C  G  G  G  
                    Query_10771  181  ATTCAAAAAACACGGTGTATTTGCAAATGGAAGGCCTGAAAACCGAAGACACAGCCGTATATTACTGTGTTAGATATTGTGGTGGTGGTA  270
V  95.2% (236/248)  IGHV3-15*01  227  ..............C.....C........A.CA.............G...........G.........----------------------  294
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  96.2% (25/26)    IGHD2-15*01  3    ------------------------------------------------------------------------........A.........  20

                                      -CDR3-IMGT--------------------->                                 
                                      S  C  Y  P  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10771  271  GCTGCTACCCCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACTACGGTCACCGTCTCCTCA  335
D  96.2% (25/26)    IGHD2-15*01  21   ........---------------------------------------------------------  28
J  98.2% (54/55)    IGHJ6*02     8    ----------....................................C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_224563

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-10*02                                                                                           19.9    0.16  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGCTCG	TGGTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGCTCGTGGTGACTACTTTGACCAC	ARGLHYYARGDYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10772  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  N  Y  Y  N  K  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_10772  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCAACTACTACAATAAGTCCCTCAAGAGTCGAATTACCATATCGGTAGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ..................................G..C.........CCC................G..........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  A  R 
                    Query_10772  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCCATTACTATGCTCGT  270
V  96.4% (241/250)  IGHV4-31*03  229  .....................................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD3-10*02  3    ----------------------------------------------------------------------------.........T...-  15

                                      ----------------->                                  
                                       G  D  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10772  271  GGTGACTACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  97.9% (47/48)    IGHJ4*02     1    ----...........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_350133

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           378     3e-107
IGHD3-3*01                                                                                            16.1    2.6   
IGHJ5*01                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAAACAGTCGGCACACTGAGA	ATTATACC	CCCACGTCGGACGTTCTAG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAAACAGTCGGCACACTGAGAATTATACCCCCACGTCGGACGTTCTAGGGTTCGACTCC	ARRNSRHTENYTPTSDVLGFDS	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_10773  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGTTA  90
V  91.7% (266/290)  IGHV5-51*01  6    .......................................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  W  R  Q  M  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_10773  91   CTGGATCGCTTGGTGGCGCCAGATGCCCGGGAAAGGCCTGGAATTAATGGGGATCATCTACCCTGGTGACTCTGATACTAGATACAATCC  180
V  91.7% (266/290)  IGHV5-51*01  96   ........GC...GT...........................G.GG..............T.................C.......GC..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  A  T  I  Y  A  D  K  S  I  G  T  A  Y  L  Q  M  S  S  L  K  A  S  D  T  A
                    Query_10773  181  GTCCTTCCAAGGTCAGGCCACCATTTATGCCGACAAGTCCATCGGCACCGCCTACCTGCAGATGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  91.7% (266/290)  IGHV5-51*01  186  ............C....T......C.CA...............A.................TG...........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------------CDR3-IMGT--------------------------->           
                                        K  Y  F  C  A  R  R  N  S  R  H  T  E  N  Y  T  P  T  S  D  V  L  G  F  D  S  W  G  Q  G
                    Query_10773  271  CAAATACTTCTGTGCGAGACGAAACAGTCGGCACACTGAGAATTATACCCCCACGTCGGACGTTCTAGGGTTCGACTCCTGGGGCCAGGG  360
V  91.7% (266/290)  IGHV5-51*01  276  ..TG..T.A...........----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-3*01   24   -----------------------------------------........-----------------------------------------  31
J  97.8% (44/45)    IGHJ5*01     7    --------------------------------------------------------------------...................A..  28

                                                             
                                        T  L  V  T  V  S  S  
                    Query_10773  361  AACCCTGGTCACCGTCTCCTCAG  383
J  97.8% (44/45)    IGHJ5*01     29   .......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_350131

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-9*01                                                                                            10.3    118   
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GC	TTGAC	GGTCGCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGCTTGACGGTCGCATACTACTTTGACTAC	ATGLTVAYYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10774  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (242/250)  IGHV4-31*03  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  D  T  S 
                    Query_10774  91   CTAGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTTACCATATCACTAGACACGTCT  180
V  96.8% (242/250)  IGHV4-31*03  139  ..G.......................................................A...................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  D  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  L  T  V  A  Y  Y 
                    Query_10774  181  AAGGACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGCTTGACGGTCGCATACTAC  270
V  96.8% (242/250)  IGHV4-31*03  229  ...A...............A.................................G.............G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-9*01   14   ------------------------------------------------------------------------.....-------------  18
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10774  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_350130

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           325     2e-91
IGHD3-10*01                                                                                           10.3    116  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGA	CTTCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGACTTCAGGCCTTTGACTCC	ARGGLQAFDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  G  G  F  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_10775  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAACAGTGGTGGATTCTACTGGACTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  91.6% (229/250)  IGHV4-31*03  49   ........................................G.........T.A........GC...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  Y  T  G  H  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  L  D  T  S 
                    Query_10775  91   CTAGAGTGGATTGGTTACATCTTTTACACTGGACACACCTACTACAATCCGTCCCTCAGGAGTCGACTTACCATATCACTAGACACATCT  180
V  91.6% (229/250)  IGHV4-31*03  139  ..G...........G.......A.....G...GAG............C..........A.......G...........G.......G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       E  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  L  Q  A  F  D 
                    Query_10775  181  GAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGGGGACTTCAGGCCTTTGAC  270
V  91.6% (229/250)  IGHV4-31*03  229  A...................G.....C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------.....---------------  20
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10775  271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.7% (43/44)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_350137

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           338     5e-95
IGHD3-22*01                                                                                           14.1    8.4  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAGGGAGCGGGATTT	TGATAGT	TT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAGGGAGCGGGATTTTGATAGTTTCTACGGTATGGACGTC	ARVRERDFDSFYGMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	230	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  R  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10776  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGAAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.3% (230/244)  IGHV4-59*02  49   .........................................T...T............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  M  Y  Y  S  G  N  T  R  Y  T  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  N 
                    Query_10776  91   TGGATCGCGTATATGTATTACAGTGGGAACACCAGGTACACCCCCTCCCTCAAGAGTCGAGCCACCATATCAGTAGACACGTCCAAGAAC  180
V  94.3% (230/244)  IGHV4-59*02  139  .....T.G......C.............G.....AC....A....................T............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  K  Y  Y  C  A  R  V  R  E  R  D  F  D  S  F 
                    Query_10776  181  CAGTTATCCCTGAAGCTGAGCTCTGTGACCGCAGCGGACACGGCCAAGTATTACTGTGCGAGAGTTAGGGAGCGGGATTTTGATAGTTTC  270
V  94.3% (230/244)  IGHV4-59*02  229  .....C..........................T............GT.................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-22*01  10   --------------------------------------------------------------------------------.......---  16
J  97.8% (45/46)    IGHJ6*02     14   -----------------------------------------------------------------------------------------.  14

                                      -------------->                              
                                       Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_10776  271  TACGGTATGGACGTCTGGGGCCAAGGGACCACTGTCACCGTCTCC  315
J  97.8% (45/46)    IGHJ6*02     15   ................................G............  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_224569

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10777  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01   49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_10777  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01   139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_10777  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01   229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01   13   ----------------------------------------------------------------------.....C..G...--------  24

                                      ----------->                                  
                                       G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_10777  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_350135

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10778  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01   49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_10778  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01   139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_10778  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01   229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01   13   ----------------------------------------------------------------------.....C..G...--------  24

                                      ----------->                                  
                                       G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_10778  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_318838

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           386     2e-109
IGHD2-8*01                                                                                            19.9    0.18  
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGGTAGG	ATGGTGTATG	ATTCAAGGGG	CTGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGGTAGGATGGTGTATGATTCAAGGGGCTGCTTCGACCCC	ARLGRMVYDSRGCFDP	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  N  Y
                    Query_10779  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCCCTGAAGATCTCCTGTAAGGGTTCCGGATACACTTTTAGCAACTA  90
V  92.7% (268/289)  IGHV5-51*03  6    ..............................A..............T.......................T.......GC....C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  S  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_10779  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGCTGGGGAGTATCTATCCCGGTGACTCTGATACCAGATACAACCC  180
V  92.7% (268/289)  IGHV5-51*03  96   ..............................................A......TC........T......................G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        T  F  Q  G  R  V  T  M  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  K  L  E  A  S  D  T  A
                    Query_10779  181  GACCTTCCAAGGCCGGGTCACCATGTCAGCCGACAAGTCCATCAACACCGCCTACCTCCAGTGGAGCAAGCTGGAGGCCTCGGACACCGC  270
V  92.7% (268/289)  IGHV5-51*03  186  .T............A.........C...................G............G..........GC...A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        I  Y  Y  C  A  R  L  G  R  M  V  Y  D  S  R  G  C  F  D  P  W  G  Q  G  T  L  V  T  V  S
                    Query_10779  271  CATCTATTACTGTGCGAGACTGGGTAGGATGGTGTATGATTCAAGGGGCTGCTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTC  360
V  92.7% (268/289)  IGHV5-51*03  276  ...G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD2-8*01   15   ----------------------------..........----------------------------------------------------  24
J  97.9% (46/47)    IGHJ5*02     5    ------------------------------------------------...G......................................  46

                                           
                                        S  
                    Query_10779  361  CTCAG  365
J  97.9% (46/47)    IGHJ5*02     47   .....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_157958

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10780  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ........................................G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_10780  91   TGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ........G...A..T...............................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y 
                    Query_10780  181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............C....C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10780  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_157959

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           374     7e-106
IGHD3-3*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	242	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10781  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (242/245)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_10781  91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.8% (242/245)  IGHV4-34*01  139  .........................................................................T................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_10781  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  98.8% (242/245)  IGHV4-34*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10781  271  GCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_157956

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            341     5e-96
IGHD5-12*01                                                                                           18.0    0.59 
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	ACGGGTAGAGA	TGGCTACAATTA	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAACGGGTAGAGATGGCTACAATTATGATGCTTTGGATATG	AGTGRDGYNYDALDM	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  S  D  Y  W  M  T  W  V  R  Q  A  P  G  K  G  P  
                    Query_10782  1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCACCTTCAGTGACTATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  94.0% (233/248)  IGHV3-7*03   47   .......................G................T...AG...........G.............................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  H  D  G  R  E  K  N  Y  V  D  A  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10782  91   AGTGGGTGGCCAACATTAAACATGATGGACGTGAGAAAAACTATGTCGACGCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (233/248)  IGHV3-7*03   137  ................A..G..A......A........T.......G...T.......................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  G  T  G  R  D  G  Y  N  
                    Query_10782  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTGTATTACTGTGCGGGAACGGGTAGAGATGGCTACAATT  270
V  94.0% (233/248)  IGHV3-7*03   227  ....................................C............................A..----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD5-12*01  11   -------------------------------------------------------------------------------.......G...  21

                                      ---------------->                                  
                                      Y  D  A  L  D  M  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10782  271  ATGATGCTTTGGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCCTCAG  321
D  91.7% (11/12)    IGHD5-12*01  22   .--------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    -.........T.....C.............................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_157957

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           302     3e-84
IGHD5-18*01                                                                                           39.1    3e-07
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	N/A	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	20	10	0	66.7
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	249	221	28	0	88.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  E  G  S  V  T  T  T  D  S  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_10783  4    CCCTGAGACTCTCCTGCTCTGTCTCTGAAGGCTCCGTCACCACGACTGATTCCTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  88.8% (221/249)  IGHV4-39*01  50   .....TCC...A.....A.........GT......A...G..GT.G.AG..A......................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  F  Y  S  G  I  T  H  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  
                    Query_10783  94   TGGAGTGGATTGGGAGTATTTTCTATAGTGGGATCACCCACTACAATCCGTCCCTCAAGAGTCGAGTCACCGTATCCGTAGACACGTCCA  183
V  88.8% (221/249)  IGHV4-39*01  140  ...................C.AT..........G....T.......C........................A..................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  H  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  
                    Query_10783  184  GGCACCAGTTCTCCCTGAACCTGAGATCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACT  273
V  88.8% (221/249)  IGHV4-39*01  230  A.A................G.....C..............A.......................G....---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (20/20)   IGHD5-18*01  1    ---------------------------------------------------------------------....................-  20

                                      ------------->                                  
                                      Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10783  274  ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (48/48)   IGHJ4*02     1    ................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_157954

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            402     3e-114
IGHD6-6*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	74	1	0	98.7
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	100	14	0	87.7
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	276	19	0	93.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S 
                    Query_10784  1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGC  90
V  93.6% (276/295)  IGHV1-8*02   1    .......................G..........................................................C.....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 
                    Query_10784  91   AGCTATGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTAT  180
V  93.6% (276/295)  IGHV1-8*02   91   .............A.........................................................C..................  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D 
                    Query_10784  181  GCACAGAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGAC  270
V  93.6% (276/295)  IGHV1-8*02   181  ............C............C.......A..A...C.T....A..................C..........G.GAT....G...  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10784  271  ACGGCCGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  93.6% (276/295)  IGHV1-8*02   271  ........G................---------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01   9    ------------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02     9    ------------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_157955

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           10.3    117  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAGGTTTCGATA	GGGGG	GG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAGGTTTCGATAGGGGGGGGGTTCGACCCC	ARDRGFDRGGVRP	238	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10785  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A......A..............................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  Y  Y  S  G  S  I  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  M  P  K  N 
                    Query_10785  91   TGGATTGCGTATATCTATTACAGTGGGAGCATCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACATGCCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  .......G.......................C...C.....................................T.....C.T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><---------------CDR3-IMGT--------
                                       Q  I  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  G  F  D  R  G  G  V 
                    Query_10785  181  CAGATCTCCCTGAAGTTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATAGAGGTTTCGATAGGGGGGGGGTT  270
V  95.1% (233/245)  IGHV4-59*01  229  ...T...........C................T................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -------------------------------------------------------------------------------.....------  22
J  100.0% (45/45)   IGHJ5*02     7    --------------------------------------------------------------------------------------....  10

                                      ------>                                  
                                       R  P  L  G  P  G  N  P  G  H  R  L  L   
                    Query_10785  271  CGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  311
J  100.0% (45/45)   IGHJ5*02     11   .........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_157952

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10786  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.2% (241/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10786  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGCCGAGTTACCATATCAGTAGACACGTCT  180
V  97.2% (241/248)  IGHV4-31*03  139  .....G.........T.C............................................T...........................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_10786  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.2% (241/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10786  271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_157953

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           361     4e-102
IGHD3-10*01                                                                                           44.9    5e-09 
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTT	GTACTACTATGGTTCGGGGAGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTGTACTACTATGGTTCGGGGAGTTATTCGGACTAC	ARSLYYYGSGSYSDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10787  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (240/249)  IGHV4-31*03  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  S  I  G  Y  I  Y  K  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  T  S 
                    Query_10787  91   CTGGAGTCCATTGGGTACATCTATAAGAGTGGGAGCACCTACTACAATCCGTCCCTCAAGAGTCGAGTCATCATATCAGTAGACACGTCT  180
V  96.4% (240/249)  IGHV4-31*03  139  .......GG...............T.C....................C....................T.C...................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  Y  G  S 
                    Query_10787  181  AGGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGATCCTTGTACTACTATGGTTCG  270
V  96.4% (240/249)  IGHV4-31*03  229  .A...................................................................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  96.2% (25/26)    IGHD3-10*01  1    --------------------------------------------------------------------------...T............  16

                                      ----------------->                                  
                                       G  S  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10787  271  GGGAGTTATTCGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  96.2% (25/26)    IGHD3-10*01  17   ..........------------------------------------------  26
J  100.0% (40/40)   IGHJ4*02     9    ------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_6780

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           302     3e-84
IGHD3-16*01                                                                                           12.2    31   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGG	TGGGGG	GGCCCCGGTAT	TACGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGGTGGGGGGGCCCCGGTATTACGCTATGGACGTC	AREGVGGPRYYAMDV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	219	26	0	89.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  M  S  D  F  Y  W  S  W  L  R  Q  P  P  G  K  A  L  E 
                    Query_10788  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGCTTCCATGAGTGACTTCTACTGGAGTTGGCTCCGGCAGCCCCCAGGGAAGGCACTGGAG  90
V  89.4% (219/245)  IGHV4-59*01  49   ..................A............GC.....C...AGT.A.........C...A.....................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  T  N  H  N  P  S  L  R  N  R  V  T  I  S  V  D  R  S  K  N 
                    Query_10788  91   TGGATTGGGTACATCTATTACACTGGGAGTACCAACCACAATCCCTCCCTCAGGAATCGAGTCACCATTTCAGTAGACAGGTCCAAGAAC  180
V  89.4% (219/245)  IGHV4-59*01  139  ...........T..........G......C......T....C..........A..G............A..........C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  E  G  V  G  G  P  R  Y  Y 
                    Query_10788  181  CAGTTCTCCCTGAAGTTGACTTCTGTGACCGCTGCGGACACGGCCATATATTATTGTGCGAGAGAGGGGGTGGGGGGGCCCCGGTATTAC  270
V  89.4% (219/245)  IGHV4-59*01  229  ...............C...GC........................G.G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------......--------------  22
J  97.9% (47/48)    IGHJ6*02     15   ---------------------------------------------------------------------------------------...  17

                                      ----------->                                 
                                       A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10788  271  GCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  315
J  97.9% (47/48)    IGHJ6*02     18   .G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_166320

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         358     4e-101
IGHD3-9*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAGGGGA	ACGATATTTTGGCTGG	GGTCCTGGACCCACC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATAAGGGGAACGATATTTTGGCTGGGGTCCTGGACCCACCCTACGACTACTACGGTATGGACGTC	ARDKGNDILAGVLDPPYDYYGMDV	244	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	240	11	0	95.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  N  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10789    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAACAGTGGTAGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  95.6% (240/251)  IGHV4-30-4*01  49   ..................A.....................G.......GA........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  R  G  R  A  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_10789    91   CTGGAGTGGATTGGGTACATCTATTACCGTGGGCGCGCCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCATTAGACACGTCC  180
V  95.6% (240/251)  IGHV4-30-4*01  139  ...........................A.....A..A.........................................G...........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------------
                                         K  N  Q  F  S  L  K  L  Y  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  K  G  N  D  I  L 
                    Query_10789    181  AAGAACCAGTTCTCCCTGAAGCTGTACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGATAAGGGGAACGATATTTTG  270
V  95.6% (240/251)  IGHV4-30-4*01  229  ........................AG.........T...................................-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  93.8% (15/16)    IGHD3-9*01     6    -------------------------------------------------------------------------------...........  16

                                        -----CDR3-IMGT------------------------------>                                 
                                         A  G  V  L  D  P  P  Y  D  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_10789    271  GCTGGGGTCCTGGACCCACCCTACGACTACTACGGTATGGACGTCTGGGGCCAGGGGACCACGGTCAGCGTCTCCTCA  348
D  93.8% (15/16)    IGHD3-9*01     17   A....-------------------------------------------------------------------------  21
J  94.8% (55/58)    IGHJ6*02       5    --------------------....T............................A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_166323

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           366     2e-103
IGHD3-10*01                                                                                           12.2    32    
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTACCTGGAGCCCT	TGGTTC	CGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACCTGGAGCCCTTGGTTCCGGACTACGGTATGGACGTC	ARDYLEPLVPDYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10790  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-33*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  Y  D  G  S  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10790  91   AGTGGGTGGCACTTATATGGTATGATGGAAGTAAAAAGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCTA  180
V  96.8% (242/250)  IGHV3-33*01  137  ...........G......................T..A..................................................C.  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  L  E  P  L  V  
                    Query_10790  181  AGAATACGGTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATTACCTGGAGCCCTTGGTTC  270
V  96.8% (242/250)  IGHV3-33*01  227  ....C...C...........................................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01  10   ------------------------------------------------------------------------------------......  15

                                      T------------------>                                 
                                      P  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10790  271  CGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  323
J  98.0% (49/50)    IGHJ6*02     13   ---..............................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_6783

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            305     3e-85
IGHD4-17*01                                                                                           12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGCTTCTGGAGA	TGACTA	TAAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGCTTCTGGAGATGACTATAATTTTGACTCC	ARVASGDDYNFDS	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	222	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  D  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10791  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTTAGTGACTACTGGATGAGTTGGGTCCGCCAGGCTCCAGGTAAGGGGCTGG  90
V  89.2% (222/249)  IGHV3-7*03   47   ....................................CC......AG...T........C....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  Y  T  N  H  D  E  T  E  K  Y  Y  V  A  S  L  R  G  R  F  T  I  S  R  D  N  G  
                    Query_10791  91   AGTGGGTGGCCTACACAAATCATGATGAAACTGAGAAGTACTATGTGGCCTCTTTGAGGGGCCGGTTCACCATCTCCAGAGACAACGGCA  180
V  89.2% (222/249)  IGHV3-7*03   137  ...........A...T...G..A....G..G......A..........A....G...A......A......................C..  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  K  S  L  L  L  Q  M  T  S  L  R  A  D  D  S  A  V  Y  Y  C  A  R  V  A  S  G  D  D  Y  
                    Query_10791  181  AGAAGTCACTTCTTCTGCAAATGACGAGCCTGAGAGCCGACGACTCGGCCGTGTATTACTGTGCGAGAGTCGCTTCTGGAGATGACTATA  270
V  89.2% (222/249)  IGHV3-7*03   227  ....C.....GTA...........AC..............G...A........................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD4-17*01  1    ----------------------------------------------------------------------------------......--  6

                                      ---------->                                  
                                      N  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10791  271  ATTTTGACTCCTGGGGCCAGGGAACCCTGGTCACTGTTTCCTCAG  315
J  93.0% (40/43)    IGHJ4*02     6    --.......A........................C..C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_166325

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         353     9e-100
IGHD5-18*01                                                                                           14.1    8.6   
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GAAG	ACAGATATGG	GGGACTTTGGACCTGCAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAAGACAGATATGGGGGACTTTGGACCTGCATTACTTTGACTTC	ARGRQIWGTLDLHYFDF	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  R  G 
                    Query_10792    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  95.2% (238/250)  IGHV4-30-2*01  49   .....................................................................................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  F  Y  N  T  E  T  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  D  R  S 
                    Query_10792    91   CTGGAGTGGATTGGATACTTCTATAATACTGAGACCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCACTAGACAGGTCC  180
V  95.2% (238/250)  IGHV4-30-2*01  139  ..............G...A.....C...G..G..G.......................A...................G...........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  Q  I  W  G  T 
                    Query_10792    181  AAGAACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGCGCCAGAGGAAGACAGATATGGGGGACT  270
V  95.2% (238/250)  IGHV4-30-2*01  229  ...................A......C...................................T.......--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD5-18*01    7    --------------------------------------------------------------------------....C.....------  16

                                        MGT-------------------->                                  
                                         L  D  L  H  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10792    271  TTGGACCTGCATTACTTTGACTTCTGGGGCCAGGGCACCCTCGTCACCGTCTCCTCAG  328
J  93.5% (43/46)    IGHJ4*02       3    ------------..........A............A.....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_6785

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD1-26*01                                                                                           10.3    120  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TGCCCCATATACGCAAAAAACTA	GAGCT	TTTCGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGCCCCATATACGCAAAAAACTAGAGCTTTTCGCCTTGACTAC	ASAPYTQKTRAFRLDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	228	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  F  S  G  D  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10793  1    ACCCTGTCCCTCACCTGCACTTTCTCTGGTGACTCCATCAGTAACTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.2% (228/242)  IGHV4-59*01  49   .....................G.........G...........GT.............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_10793  91   TGGATTGGCTATATCTATTACAGTGGGAACACCAACTACAACCCCTCCCTCAAAAGTCGAGTCACCATTTCAGTAGACACGTCGAAGAAG  180
V  94.2% (228/242)  IGHV4-59*01  139  ........G...................G........................G..............A..............C.....C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  R  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  S  A  P  Y  T  Q  K  T  R  A 
                    Query_10793  181  CAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGTGCCCCATATACGCAAAAAACTAGAGCT  270
V  94.2% (228/242)  IGHV4-59*01  229  .............A......C..................A.......G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  11   -------------------------------------------------------------------------------------.....  15

                                      -------------->                                  
                                       F  R  L  D  Y  W  G  Q  G  S  L  V  T  V  S  A  
                    Query_10793  271  TTTCGCCTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCGCAG  319
J  95.2% (40/42)    IGHJ4*02     7    -------....................A.................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_166327

Length=442
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           366     2e-103
IGHD3-16*01                                                                                           18.0    0.76  
IGHJ6*02                                                                                              73.7    3e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCCACCCCCAGGCCCGAGGAGA	ATGATCGCGTTTGGG	CCCCCTGGGACGCCCATACCCCCCCTCCGATTACCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCACCCCCAGGCCCGAGGAGAATGATCGCGTTTGGGCCCCCTGGGACGCCCATACCCCCCCTCCGATTACCCACTACTCGGCTATGGAGGTC	STPRPEENDRVWAPWDAHTPPPITHYSAMEV	292	384	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	71	4	0	94.7
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	101	13	0	88.6
Total	N/A	N/A	288	261	27	0	90.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  G  G  V  K  R  P  G  A  S  V  R  V  S  C  K  A  S  A  Y  T  F  T 
                    Query_10794  4    CAGGTTCAGCTGGTGCAGTCTGGAGGTGGGGTGAAGAGGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGCTTACACTTTTACC  93
V  90.6% (261/288)  IGHV1-18*04  1    .........................C..A........A.................A....................G......C......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  V  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  V  K  N  G  N  T  H  Y 
                    Query_10794  94   ACCTACGTGATCAGCTGGGTGCGACAGGCCCCAGGACAAGGACTTGAGTGGATGGGATGGATCAGCGTTAAGAATGGTAACACACACTAT  183
V  90.6% (261/288)  IGHV1-18*04  91   .G.....GT.......................T........G.........................C.T.C............A.....  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  P  E  F  Q  G  R  L  T  M  T  T  D  A  F  T  T  T  A  Y  L  D  L  T  S  L  R  S  D  D 
                    Query_10794  184  GCACCGGAGTTCCAGGGCAGACTCACCATGACCACAGACGCATTCACGACCACAGCCTATCTGGACCTGACGAGCCTGAGATCTGACGAC  273
V  90.6% (261/288)  IGHV1-18*04  181  ....A.A..C...........G.................A...C.....G.........CA....G....G...................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------------------------------------CDR3-IMGT---------------------
                                       A  A  V  Y  Y  C  S  T  P  R  P  E  E  N  D  R  V  W  A  P  W  D  A  H  T  P  P  P  I  T 
                    Query_10794  274  GCGGCCGTGTATTACTGTTCCACCCCCAGGCCCGAGGAGAATGATCGCGTTTGGGCCCCCTGGGACGCCCATACCCCCCCTCCGATTACC  363
V  90.6% (261/288)  IGHV1-18*04  271  A.................------------------------------------------------------------------------  288
                                       T  A  V  Y  Y  C                                                                         
D  86.7% (13/15)    IGHD3-16*01  6    ----------------------------------------.....TA........-----------------------------------  20

                                      -------------------->                                 
                                       H  Y  S  A  M  E  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_10794  364  CACTACTCGGCTATGGAGGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  417
J  90.6% (48/53)    IGHJ6*02     10   -......AC.G......C.........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 43549488


Query= Query_166326

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            360     1e-101
IGHD2-15*01                                                                                           14.1    8.7   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATATGC	GGATATT	CTGTCCTTAGGTTTTAGGCGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATATGCGGATATTCTGTCCTTAGGTTTTAGGCGTTACTACTTTGACTAC	AKYADILSLGFRRYYFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	238	8	0	96.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10795  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.7% (238/246)  IGHV3-7*01   47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  Y  E  K  Y  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_10795  91   AGTGGGTGGCCAACATAAAGGAAGATGGATATGAGAAATACTATGTGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.7% (238/246)  IGHV3-7*01   137  ....................C........AG..........................A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  I  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  Y  A  D  I  L  S  L  
                    Query_10795  181  AGAACTCACTGTATCTGCAAATCAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTATTGTGCGAAATATGCGGATATTCTGTCCTTAG  270
V  96.7% (238/246)  IGHV3-7*01   227  ......................G.............C.....................C.......------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-15*01  2    -------------------------------------------------------------------------.......----------  8

                                      IMGT--------------------->                                  
                                      G  F  R  R  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10795  271  GTTTTAGGCGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
J  100.0% (48/48)   IGHJ4*02     1    ------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_6788

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           372     2e-105
IGHD3-3*01                                                                                            39.1    3e-07 
IGHJ5*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCCA	TATTGCGATTTTTGGAGTGGTTA	CCCAGGCCTCA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGATCCATATTGCGATTTTTGGAGTGGTTACCCAGGCCTCACC	TTDPYCDFWSGYPGLT	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	247	9	0	96.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10796  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAATGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.5% (247/256)  IGHV3-15*01  47   .......T......................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  N  K  T  D  G  G  T  A  A  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_10796  91   AGTGGGTTGGCCGTATTAAAAACAAAACTGATGGTGGGACAGCAGCCTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  96.5% (247/256)  IGHV3-15*01  137  .....................G...................A...A............................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  R  N  T  V  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  D  P  Y  C  D  
                    Query_10796  181  ATTCAAGAAACACGGTCTATTTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATCCATATTGCGATT  270
V  96.5% (247/256)  IGHV3-15*01  227  ......A.......C.G...C.......................................................--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  95.7% (22/23)    IGHD3-3*01   2    --------------------------------------------------------------------------------....A.....  11

                                      R3-IMGT------------------>                                  
                                      F  W  S  G  Y  P  G  L  T  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10796  271  TTTGGAGTGGTTACCCAGGCCTCACCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  330
D  95.7% (22/23)    IGHD3-3*01   12   .............-----------------------------------------------  24
J  97.2% (35/36)    IGHJ5*02     16   ------------------------...............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_166328

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           324     8e-91
IGHD1-26*01                                                                                           14.1    8.5  
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	TGGGAGC	GCCAACTCTACACGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGGAGCGCCAACTCTACACGGCTACTACTACGGTATGGACGTC	ARVGAPTLHGYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  I  S  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10797  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCATTTCCTATGGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-21*01  47   ....................................C.....G.AG....A.......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  S  S  I  S  S  S  G  S  Y  T  Y  F  A  A  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_10797  91   CGTGGGTCTCGTCCATTAGTAGTAGTGGTTCTTACACATACTTCGCGGCCTCAGTAGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.6% (228/249)  IGHV3-21*01  137  A.........A...............A..AG.....T.....A...A.A......GA.................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  I  L  Q  M  D  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  G  A  P  T  L  H  
                    Query_10797  181  AGAACTCACTGATTCTGCAAATGGACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGTGGGAGCGCCAACTCTACACG  270
V  91.6% (228/249)  IGHV3-21*01  227  ...........TA..........A................G...........G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  8    ---------------------------------------------------------------------.......--------------  14

                                      GT-------------------->                                 
                                      G  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10797  271  GCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (55/55)   IGHJ6*02     8    -.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_301238

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           408     4e-116
IGHD1-1*01                                                                                            10.3    137   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAACG	GGTAACCCCATATCGCGGC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTAT	ARGTGNPISRLGY	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	72	3	0	96
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	105	9	0	92.1
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	295	278	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  I  S  C  K  A  S  G  Y  T  F  T 
                    Query_10798  4    CAGGTGCAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCATCTGGATACACCTTCACC  93
V  94.2% (278/295)  IGHV1-46*01  1    .......................G.C...............................G................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  T  G  G  T  N  Y 
                    Query_10798  94   AGCTATTATATGCACTGGGTACGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTACTGGTGGCACAAATTAC  183
V  94.2% (278/295)  IGHV1-46*01  91   .....C..............G...................................................GG....A......GC...  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  P  T  S  T  V  Y  L  D  L  S  S  L  E  S  E  D 
                    Query_10798  184  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGCCCACGAGCACAGTCTACTTGGACCTGAGCAGCCTTGAATCTGAGGAC  273
V  94.2% (278/295)  IGHV1-46*01  181  ..........................................T.................A....G...........GAG..........  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  Y  C  A  R  G  T  G  N  P  I  S  R  L  G  Y  W  G  Q  G  T  L  V  T  V  S  A 
                    Query_10798  274  ACGGCCGTTTATTACTGTGCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCA  363
V  94.2% (278/295)  IGHV1-46*01  271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD1-1*01   11   -------------------------.....------------------------------------------------------------  15
J  92.9% (39/42)    IGHJ4*02     7    -------------------------------------------------...A...C..............................T..  47

                                       
                                       
                    Query_10798  364  G  364
J  92.9% (39/42)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_301239

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  H
                    Query_10799  1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATCA  90
V  92.4% (268/290)  IGHV5-51*01  6    ....................C........A.....................G.........A......C.........C.......GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  P
                    Query_10799  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCCC  180
V  92.4% (268/290)  IGHV5-51*01  96   ...................................................G.......A.....G.......G....C.....C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  A
                    Query_10799  181  GTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCGC  270
V  92.4% (268/290)  IGHV5-51*01  186  ...............G........C...................................G.......G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_10799  271  CTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  350
V  92.4% (268/290)  IGHV5-51*01  276  .A.......C.....G....------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    -----------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_301232

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD6-19*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGCCCCCCGTACCGCA	TATAGCAGTGCCTG	CCACG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGCCCCCCGTACCGCATATAGCAGTGCCTGCCACGGACTAC	ARWPPVPHIAVPATDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  R  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10800  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTAGGTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.9% (238/243)  IGHV4-59*01  49   ......................................C.....T.............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  M  N 
                    Query_10800  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCATGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  .....................................................................................A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  M  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  W  P  P  V  P  H  I  A  V 
                    Query_10800  181  CAGTTCTCCCTGAAGATGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGATGGCCCCCCGTACCGCATATAGCAGTG  270
V  97.9% (238/243)  IGHV4-59*01  229  ...............C.....................................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  4    --------------------------------------------------------------------------------..........  13

                                      -------------->                                  
                                       P  A  T  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_10800  271  CCTGCCACGGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  319
D  92.9% (13/14)    IGHD6-19*01  14   G...---------------------------------------------  17
J  97.5% (39/40)    IGHJ4*02     9    ---------............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_301233

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            408     4e-116
IGHD3-16*01                                                                                           12.2    35    
IGHJ3*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GCTTCC	TGGGGG	CCATGAGA	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATC	ARGFLGAMRDGLDI	273	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	108	6	0	94.7
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	270	9	0	96.8


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  D  T  W  N  W  
                    Query_10801  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGATACTTGGAACTGGA  90
V  96.8% (270/279)  IGHV6-1*01   26   ...........................................................................C.G............  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_10801  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGGAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAG  180
V  96.8% (270/279)  IGHV6-1*01   116  .....................................A...................................................A  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      G  R  I  T  I  N  P  D  S  S  K  N  Q  F  S  L  Q  L  N  S  V  T  F  E  D  T  A  V  Y  F  
                    Query_10801  181  GTCGAATAACCATTAACCCAGACTCATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTTTCGAGGACACGGCTGTGTATTTCT  270
V  96.8% (270/279)  IGHV6-1*01   206  .............C.........A.........................................CC....................A..  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------------CDR3-IMGT--------------->                                  
                                      C  A  R  G  F  L  G  A  M  R  D  G  L  D  I  W  G  Q  G  T  M  V  P  V  S  S  
                    Query_10801  271  GTGCAAGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATCTGGGGCCAAGGGACAATGGTCCCCGTCTCTTCAG  348
V  96.8% (270/279)  IGHV6-1*01   296  .........---------------------------------------------------------------------  304
                                      C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  17   ---------------......---------------------------------------------------------  22
J  93.9% (46/49)    IGHJ3*02     2    -----------------------------....C...T...........................A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_301236

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           434     4e-124
IGHJ3*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ACCCTCGG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTCGGTGCTCTTGATATC	ARTLGALDI	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	283	5	0	98.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_10802  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTAT  91
V  98.3% (283/288)  IGHV1-18*01  7    ..........................................................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  R  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_10802  92   GGTATCAGCTGGGTGCGACGGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAATTATGCACAG  181
V  98.3% (283/288)  IGHV1-18*01  97   ...................A...............G.........................C..................C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10802  182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  98.3% (283/288)  IGHV1-18*01  187  ...C......................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------CDR3-IMGT-------->                                  
                                       V  Y  Y  C  A  R  T  L  G  A  L  D  I  W  G  Q  G  A  M  V  T  V  S  P  
                    Query_10802  272  GTGTATTACTGTGCGAGAACCCTCGGTGCTCTTGATATCTGGGGCCAAGGGGCAATGGTCACCGTCTCTCCAG  344
V  98.3% (283/288)  IGHV1-18*01  277  ..................-------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                        
J  93.6% (44/47)    IGHJ3*02     4    --------------------------....T....................A.................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_301237

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_10803  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_10803  91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y 
                    Query_10803  181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTAC  270
V  91.4% (223/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD2-2*01   8    ---------------------------------------------------------------------........T........----  24
J  88.5% (46/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_10803  271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  318
J  88.5% (46/52)    IGHJ6*02     15   ...GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_301235

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            374     8e-106
IGHD3-22*01                                                                                           39.1    3e-07 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	CG	TTACTATGATAGTAGTGGTT	CAGACCACACCCCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAAAGATCGTTACTATGATAGTAGTGGTTCAGACCACACCCCTCTTGACTAC	VKDRYYDSSGSDHTPLDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	251	9	8	1	0	88.9
Total	N/A	N/A	251	245	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10804  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGGCATGAACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  97.6% (245/251)  IGHV3-9*01   47   ...................................................C....C.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  N  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10804  91   AGTGGGTCTCAGGTATCAGTTGGAATAGTGGTAACATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (245/251)  IGHV3-9*01   137  ................T................G........................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  D  R  Y  Y  D  S  S  
                    Query_10804  181  AGAAGTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGTAAAAGATCGTTACTATGATAGTAGTG  270
V  97.6% (245/251)  IGHV3-9*01   227  ....C..........................................................C.......-------------------  297
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (20/20)   IGHD3-22*01  4    -------------------------------------------------------------------------.................  20

                                      IMGT--------------------->                                  
                                      G  S  D  H  T  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10804  271  GTTCAGACCACACCCCTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (20/20)   IGHD3-22*01  21   ...---------------------------------------------------------  23
J  100.0% (42/42)   IGHJ4*02     7    ------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_149301

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           346     2e-97
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AC	ATTACGATTTTTCGAGTGGT	CTCATTATCGGAAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACATTACGATTTTTCGAGTGGTCTCATTATCGGAACTGACTAC	AREHYDFSSGLIIGTDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  R  G  S  Y  Y  W  S  W  N  R  Q  S  P  G  K  G 
                    Query_10805  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGAGGTTCTTACTACTGGAGTTGGAACCGGCAGTCCCCAGGGAAGGGA  90
V  94.0% (236/251)  IGHV4-61*01  49   .........................................C..T...AG............C....T.......C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  H  S  G  S  T  N  Y  H  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_10805  91   CTGGAGTGGATTGGGTATATTTATCACAGTGGGAGCACCAACTATCACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCC  180
V  94.0% (236/251)  IGHV4-61*01  139  ....................C...T...................CA................................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  H  Y  D  F  S  S 
                    Query_10805  181  AAGAACCAGTTCTCCCTGAAGCTGAATTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGAACATTACGATTTTTCGAGT  270
V  94.0% (236/251)  IGHV4-61*01  229  .........................GC..........................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-3*01   3    -------------------------------------------------------------------------............G....  19

                                      MGT-------------------->                                  
                                       G  L  I  I  G  T  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_10805  271  GGTCTCATTATCGGAACTGACTACTGGGGCCAGGGTACCCTGGTCACCGTCTCCCCAG  328
D  95.0% (19/20)    IGHD3-3*01   20   ...-------------------------------------------------------  22
J  95.1% (39/41)    IGHJ4*02     8    -----------------..................A..................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_149302

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           305     3e-85
IGHD2-15*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              43.0    4e-08


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GTCGGGAAGAAC	AGTGGTGG	CT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTCGGGAAGAACAGTGGTGGCTTTTGACTTA	AKSGRTVVAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	221	26	0	89.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  R  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10806  1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCAACTTTAGCAGGTATGCCATGCATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.5% (221/247)  IGHV3-23*01  47   ......................A.............C.........C.........AGC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  R  G  S  G  S  S  T  K  Y  A  D  S  V  K  G  R  I  T  I  S  R  D  N  S  
                    Query_10806  91   AGTGGGTCGCAGCCATCAGGGGCAGTGGTAGTAGCACAAAATATGCAGACTCCGTTAAGGGCCGGATCACCATCTCCAGAGACAATTCCA  180
V  89.5% (221/247)  IGHV3-23*01  137  ........T....T..T..T..T......G........T.C..C...........G.........T........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  R  M  L  Y  L  Q  M  N  S  M  R  A  E  D  T  A  V  Y  L  C  A  K  S  G  R  T  V  V  A  
                    Query_10806  181  AGAGAATGCTATATCTTCAAATGAACAGCATGAGAGCCGAGGACACGGCCGTATATCTTTGTGCGAAGTCGGGAAGAACAGTGGTGGCTT  270
V  89.5% (221/247)  IGHV3-23*01  227  ...AC.C...G.....G............C..........................TAC........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD2-15*01  11   -------------------------------------------------------------------------------........---  18
J  83.7% (36/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                  
                                      F  D  L  W  G  P  G  I  Q  A  T  A  S  S  
                    Query_10806  271  TTGACTTATGGGGCCCGGGAATCCAGGCCACCGCCTCCTCAG  312
J  83.7% (36/43)    IGHJ4*02     7    ......AC.......A.....C..T..T.....T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_149303

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	272	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  P  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_10807  1    GCAGCCGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  95.1% (272/286)  IGHV5-51*01  6    .....T............................................A...............T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_10807  91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCTTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGACACCAGATACAGTCC  180
V  95.1% (272/286)  IGHV5-51*01  96   ......................A.......G......C......G..............................T...........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  N  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_10807  181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  95.1% (272/286)  IGHV5-51*01  186  ....................C...................A...G.......................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        M  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  P  G  T  L  V  T  V  S  S 
                    Query_10807  271  CATGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCA  352
V  95.1% (272/286)  IGHV5-51*01  276  ................------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                   
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     8    ------------------------------------------..............A.........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_149308

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           349     2e-98
IGHD2-2*01                                                                                            21.8    0.042
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAACATC	TTGGAGTAGTCCCAACTGCCATG	ACATAT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAACATCTTGGAGTAGTCCCAACTGCCATGACATATACTCCTTTGGCTAC	ATTSWSSPNCHDIYSFGY	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	247	4	4	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10808  1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.1% (235/247)  IGHV4-31*01  49   ....................T..............................T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  H  T  G  G  T  Y  Y  N  P  S  L  K  S  L  A  T  I  S  L  D  T  S 
                    Query_10808  91   CTGGAGTGGATTGGGTACATCTTTCACACTGGGGGCACCTACTACAACCCGTCCCTCAAGAGTCTAGCTACCATATCACTAGACACGTCT  180
V  95.1% (235/247)  IGHV4-31*01  139  ......................A.T...G....A.................................T..........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  N  Q  S  S  L  T  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  T  S  W  S  S  P  N 
                    Query_10808  181  AAGAACCAGTCCTCCCTGACGCTGAGATCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGACAACATCTTGGAGTAGTCCCAAC  270
V  95.1% (235/247)  IGHV4-31*01  229  ..........T........A......C........................................-----------------------  295
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  82.6% (19/23)    IGHD2-2*01   7    --------------------------------------------------------------------------...T......A...G.  22

                                      -IMGT--------------------->                                  
                                       C  H  D  I  Y  S  F  G  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10808  271  TGCCATGACATATACTCCTTTGGCTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  331
D  82.6% (19/23)    IGHD2-2*01   23   ...T...------------------------------------------------------  29
J  93.8% (45/48)    IGHJ4*02     1    -------------...A.....A................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_211618

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTGCCTTCGGTCCGA	ATAGCAGT	TGACAGGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGCCTTCGGTCCGAATAGCAGTTGACAGGGGCTACTCCGGCATGGACGTC	ARLPSVRIAVDRGYSGMDV	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  P  G  D  S  L  N  S  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10809  1    ACCCTGTCCCTCACCTGCACTGTCCCTGGCGACTCCTTGAATAGTTACTTCTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.8% (223/243)  IGHV4-59*01  49   ........................T....T.G....A.C.G........A.....G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  D  S  E  T  T  K  Y  N  P  S  L  R  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_10809  91   TGGATTGGCTATATCTATGACAGTGAGACCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.8% (223/243)  IGHV4-59*01  139  ........G.........T......G..G......C................A....................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  T  V  T  S  V  T  P  A  D  T  A  V  Y  F  C  A  R  L  P  S  V  R  I  A  V  D 
                    Query_10809  181  CAGTTCTCCCTGACGGTGACCTCTGTGACCCCTGCGGACACGGCCGTGTATTTCTGTGCGAGATTGCCTTCGGTCCGAATAGCAGTTGAC  270
V  91.8% (223/243)  IGHV4-59*01  229  .............A.C...G..........G.....................A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  5    ------------------------------------------------------------------------------........----  12

                                      ----------------------->                                 
                                       R  G  Y  S  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10809  271  AGGGGCTACTCCGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  327
J  96.2% (50/52)    IGHJ6*02     11   -----.....A...T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_104093

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*11                                                                                           374     9e-106
IGHD3-10*01                                                                                           12.2    36    
IGHJ3*01                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*11	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCCGCGAGACACTCAC	TTCGGG	CGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCCGCGAGACACTCACTTCGGGCGGGCTTTTGATGTC	AAPRDTHFGRAFDV	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	71	4	0	94.7
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	103	11	0	90.4
CDR3-IMGT (germline)	291	293	3	3	0	0	100
Total	N/A	N/A	291	265	26	0	91.1


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  T  P  G  S  S  V  K  V  S  C  K  T  S  G  G  P  F  S 
                    Query_10810  3    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGACGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACTTCTGGAGGCCCCTTCAGT  92
V  91.1% (265/291)  IGHV1-69*11  1    ...........G...........G.............A...............................G...........A.......C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  A  L  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  F  I  P  T  L  G  T  T  D  Y 
                    Query_10810  93   AACTATGCTCTCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGCTGGGATGGTTCATCCCTACCCTTGGGACAACAGACTAC  182
V  91.1% (265/291)  IGHV1-69*11  91   .G.......A...............................G.........A.....A..A.........T......T...G..A.....  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  T  F  Q  G  R  V  T  F  T  A  D  E  S  T  G  T  V  Y  M  E  V  S  G  L  T  S  E  D 
                    Query_10810  183  GCACAGACGTTCCAGGGCAGAGTCACTTTTACCGCGGACGAATCCACGGGCACAGTCTACATGGAGGTGAGCGGCCTGACATCTGAAGAC  272
V  91.1% (265/291)  IGHV1-69*11  181  .......A..................GA....................A......C..........C.....A......G......G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  A  P  R  D  T  H  F  G  R  A  F  D  V  W  G  Q  G  T  L  V  T  V  S 
                    Query_10810  273  ACGGCCGTCTATTACTGTGCGGCCCCGCGAGACACTCACTTCGGGCGGGCTTTTGATGTCTGGGGCCAGGGGACACTGGTCACCGTCTCT  362
V  91.1% (265/291)  IGHV1-69*11  271  ........G............---------------------------------------------------------------------  291
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (6/6)     IGHD3-10*01  13   ---------------------------------------......---------------------------------------------  18
J  95.7% (44/46)    IGHJ3*01     5    ------------------------------------------------....................A......A..............  46

                                          
                                       S  
                    Query_10810  363  TCAG  366
J  95.7% (44/46)    IGHJ3*01     47   ....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_211616

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           288     5e-80
IGHD3-22*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAC	ATAGTACTGG	CCGAATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATAGTACTGGCCGAATCATTGACTAT	ARAHSTGRIIDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G 
                    Query_10811  1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  86.8% (217/250)  IGHV4-31*01  49   ...................C................A...G.A....TGG..A...C....G.............CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  Y  I  Y  H  V  E  S  T  S  R  N  P  S  L  K  S  Q  L  T  I  S  L  D  P  S 
                    Query_10811  91   CTGGAGTGGATGGGATACATCTATCACGTTGAGAGCACCTCCCGCAACCCGTCCCTCAAGAGTCAACTTACCATTTCACTCGACCCGTCT  180
V  86.8% (217/250)  IGHV4-31*01  139  ...........T..G.........T..AG..G........A.TA....................T.G.......A...G.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  S  Q  F  S  L  K  L  A  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  S  T  G  R  I 
                    Query_10811  181  AAGAGCCAGTTCTCCCTAAAACTGGCCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCACATAGTACTGGCCGAATC  270
V  86.8% (217/250)  IGHV4-31*01  229  ....A............G..G...AG....G.......................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-22*01  12   -------------------------------------------------------------------------......G...-------  21

                                      -------->                                  
                                       I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10811  271  ATTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.6% (41/42)    IGHJ4*02     7    -.......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_211617

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         367     6e-104
IGHD4-17*01                                                                                           21.8    0.040 
IGHJ5*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGACTACGGTG	GTGACTC	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATGACTACGGTGGTGACTCCAATTGGTTCGACCCC	VRDDYGGDSNWFDP	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	243	8	0	96.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  R  G 
                    Query_10812    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  96.8% (243/251)  IGHV4-30-2*01  49   .....................................................................................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  S  Y  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_10812    91   CTGGAGTGGATTGGGTACATCTATCATAGTGGGAGCTCCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCAATAGACACGTCC  180
V  96.8% (243/251)  IGHV4-30-2*01  139  ....................................A.....................................A...G......G....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  D  D  Y  G  G  D  S 
                    Query_10812    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGTCAGAGATGACTACGGTGGTGACTCC  270
V  96.8% (243/251)  IGHV4-30-2*01  229  .....................................................G.....C....C......-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD4-17*01    1    -----------------------------------------------------------------------...........--------  11
J  97.9% (47/48)    IGHJ5*02       2    -----------------------------------------------------------------------------------------.  2

                                        -------------->                                
                                         N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_10812    271  AATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  317
J  97.9% (47/48)    IGHJ5*02       3    ..C............................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_211614

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           422     2e-120
IGHD2-2*02                                                                                            19.9    0.18  
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAAAGTGGCGGGGA	ACCAGCTGTTATA	AAGAGCGCTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCC	ARGKWRGTSCYKERCWFDP	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	279	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  S  N  Y
                    Query_10813  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTAGCAACTA  90
V  96.9% (279/288)  IGHV5-51*03  6    .................................................................G...........G.....C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  R  Y  R  P
                    Query_10813  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATAATCTATCCTGGTGACTCTGAGACCAGATACAGACC  180
V  96.9% (279/288)  IGHV5-51*03  96   ........G.............................................C....................T...........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_10813  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (279/288)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  G  K  W  R  G  T  S  C  Y  K  E  R  C  W  F  D  P  W  G  Q  G  T  L  V
                    Query_10813  271  CATGTATTATTGTGCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  360
V  96.9% (279/288)  IGHV5-51*03  276  .........C........------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  92.3% (12/13)    IGHD2-2*02   17   ----------------------------------........C....-------------------------------------------  29
J  100.0% (47/47)   IGHJ5*02     5    ---------------------------------------------------------.................................  37

                                                    
                                        T  V  S  S  
                    Query_10813  361  CACCGTCTCCTCAG  374
J  100.0% (47/47)   IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_211615

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            350     8e-99
IGHD1-26*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TAGTGGG	GACT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGTGGGGACTACTACTTTGACCAC	ARDSGDYYFDH	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  S  Y  W  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_10814  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAGTAGTTATTGGATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-7*01   47   ....................................C.........C.........A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  R  Q  D  G  N  E  I  Y  Y  G  D  S  A  R  G  R  F  T  I  S  R  D  N  A  
                    Query_10814  91   AGTGGGTGGCCAACATAAGGCAAGATGGAAATGAGATATACTATGGGGACTCTGCAAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (237/250)  IGHV3-7*01   137  ..................A...........G.....A........T........TG.A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  F  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  G  D  Y  Y  F  
                    Query_10814  181  AGAACTCACTGTTTCTGCAACTGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGAGATAGTGGGGACTACTACTTTG  270
V  94.8% (237/250)  IGHV3-7*01   227  ............A.......A.....................................C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  5    ----------------------------------------------------------------------.......-------------  11
J  97.9% (47/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------.........  9

                                      ---->                                  
                                      D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10814  271  ACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.9% (47/48)    IGHJ4*02     10   ..T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_211612

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         375     3e-106
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GCCTTCGGG	ACTATGTTTCGGGGAATTA	CT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGCCTTCGGGACTATGTTTCGGGGAATTACTACAACTGGTTCGACCCC	ARGLRDYVSGNYYNWFDP	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10815    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  98.0% (245/250)  IGHV4-30-4*01  49   ..................A..............................A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10815    91   CTGGAGTGGATTGGGTACATCTATTACAGTGGAAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  98.0% (245/250)  IGHV4-30-4*01  139  ................................G.........................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R  G  L  R  D  Y  V  S 
                    Query_10815    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTGCTGCGCCAGAGGCCTTCGGGACTATGTTTCG  270
V  98.0% (245/250)  IGHV4-30-4*01  229  ..........................................................A...T.......--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.5% (17/19)    IGHD3-10*01    6    -------------------------------------------------------------------------------......G....  16

                                        -IMGT--------------------->                                  
                                         G  N  Y  Y  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10815    271  GGGAATTACTACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  89.5% (17/19)    IGHD3-10*01    17   ....G...-----------------------------------------------------  24
J  100.0% (51/51)   IGHJ5*02       1    ----------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_211610

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_10816  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_10816  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_10816  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_10816  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_211611

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           333     1e-93
IGHD1-26*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGG	ATAGTGGGAGCTACTAC	GGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGGATAGTGGGAGCTACTACGGCCTTTGACTAC	ASRIVGATTAFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  V  S  G  F  T  F  S  K  Y  Y  M  S  W  I  R  Q  S  P  G  K  G  L  
                    Query_10817  1    GGTCCCTGAGACTCTCCTGTGAAGTCTCTGGATTCACCTTCAGTAAATACTACATGAGCTGGATTCGCCAGAGTCCAGGGAAGGGGCTGG  90
V  93.1% (230/247)  IGHV3-11*06  47   .....................C..C...................G.C.................C......GC.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  G  S  S  S  F  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10817  91   AGTGGCTTTCATACATCAGTGGTAGTAGCAGTTTCACAGACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.1% (230/247)  IGHV3-11*06  137  .....G..........T...A.......T....A....A...................................................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  H  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  R  I  V  G  A  T  T  
                    Query_10817  181  AGAACTCATTATATCTGCACATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTACTACTGTGCGAGCCGGATAGTGGGAGCTACTACGG  270
V  93.1% (230/247)  IGHV3-11*06  227  ........C.G........A...................................T...........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (17/17)   IGHD1-26*01  4    -----------------------------------------------------------------------.................--  20

                                      ---------->                                  
                                      A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10817  271  CCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (44/44)   IGHJ4*02     5    -............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_206362

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           353     9e-100
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ5*01                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGGGGCGCGCCC	GTATTACTTTGATAGT	CATAGGCCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCGGGGGCGCGCCCGTATTACTTTGATAGTCATAGGCCTTTCGACTCC	ARAGARPYYFDSHRPFDS	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	235	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_10818  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  96.3% (235/244)  IGHV4-59*01  49   ..........................................A....................................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  S  K  N 
                    Query_10818  91   TGGATTGGGTATATGTATTACAGTGGTAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCCTATCAGTAGACACGTCCAAGAAC  180
V  96.3% (235/244)  IGHV4-59*01  139  ..............C...........G.......................................A.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       L  F  S  L  K  L  F  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  A  R  P  Y  Y  F  D 
                    Query_10818  181  CTGTTCTCCCTGAAGCTGTTCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGCGGGGGCGCGCCCGTATTACTTTGAT  270
V  96.3% (235/244)  IGHV4-59*01  229  .A................AG........................................A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.8% (15/16)    IGHD3-22*01  1    -----------------------------------------------------------------------------........A....  13

                                      -------------------->                                  
                                       S  H  R  P  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10818  271  AGTCATAGGCCTTTCGACTCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  93.8% (15/16)    IGHD3-22*01  14   ...----------------------------------------------------  16
J  95.3% (41/43)    IGHJ5*01     9    ------------.................A...A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_206363

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            355     3e-100
IGHD6-19*01                                                                                           27.6    7e-04 
IGHJ3*01                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCATAC	AGCAGTGGCTGGTA	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCATACAGCAGTGGCTGGTATGATGCTTTTGACTTC	ARAYSSGWYDAFDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10819  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCCTTTAGTTCGTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (237/247)  IGHV3-7*01   47   ...................................A........AGC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  Q  D  A  S  A  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10819  91   AGTGGGTGGCCAACATAAACCAAGATGCAAGTGCGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (237/247)  IGHV3-7*01   137  ...................G.......G.....A........................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  Y  S  S  G  W  Y  
                    Query_10819  181  AGAACTCACTGTTTTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCAGTGTATTACTGTGCGAGGGCATACAGCAGTGGCTGGTATG  270
V  96.0% (237/247)  IGHV3-7*01   227  ............A.C..................................T.................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (14/14)   IGHD6-19*01  7    --------------------------------------------------------------------------..............--  20
J  92.0% (46/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------------..  2

                                      ------------->                                  
                                      D  A  F  D  F  W  G  P  G  T  M  V  T  V  S  S  
                    Query_10819  271  ATGCTTTTGACTTCTGGGGCCCAGGGACGATGGTCACCGTCTCTTCAG  318
J  92.0% (46/50)    IGHJ3*01     3    ..........TG.........A......A...................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_206360

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            392     2e-111
IGHD2-15*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACTTAGGGCGAGGGGTC	GTGGTGGTAGC	CCTACCTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAACTTAGGGCGAGGGGTCGTGGTGGTAGCCCTACCTGGTACTTTGACTAC	ARELRARGRGGSPTWYFDY	269	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	154	27	25	2	0	92.6
FR3-IMGT	155	268	114	110	4	0	96.5
CDR3-IMGT (germline)	269	276	8	8	0	0	100
Total	N/A	N/A	275	263	12	0	95.6


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  Y  S  A  A  W  N  W  I  R 
                    Query_10820  2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGCGACAGTGTCTCTAGCTACAGTGCTGCTTGGAACTGGATCAGG  91
V  95.6% (263/275)  IGHV6-1*01   31   ........G...T.G................................G...............A..........................  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  S  R  S  K  W  Y  T  D  Y  A  V  S  V  K  S  R 
                    Query_10820  92   CAGTCGCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTCCAGGTCCAAGTGGTATACTGATTATGCAGTCTCTGTGAAGAGTCGA  181
V  95.6% (263/275)  IGHV6-1*01   121  .....C.....................................A.................A............A........A......  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       M  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_10820  182  ATGACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGCGCA  271
V  95.6% (263/275)  IGHV6-1*01   211  ..A...................................................................................T...  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      ---------------------CDR3-IMGT----------------------->                                  
                                       R  E  L  R  A  R  G  R  G  G  S  P  T  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10820  272  AGAGAACTTAGGGCGAGGGGTCGTGGTGGTAGCCCTACCTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  95.6% (263/275)  IGHV6-1*01   301  .....-----------------------------------------------------------------------------------  305
                                       R                                                                                      
D  100.0% (11/11)   IGHD2-15*01  12   ----------------------...........-------------------------------------------------------  22
J  100.0% (46/46)   IGHJ4*02     3    ------------------------------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_206361

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           296     2e-82
IGHD6-13*01                                                                                           12.2    31   
IGHJ4*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGACACTCCAC	TATAGC	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGACACTCCACTATAGCCCCTTTGACCTC	ARGTLHYSPFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	218	29	0	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  R  F  N  N  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10821  1    GGTCCCTGAGACTCTCCTGTGTAGCGTCTGGATTCAGGTTCAATAACTATGCCATGCACTGGGTCCGCCAGGCTCCCGGCAAGGGGCTGG  90
V  88.3% (218/247)  IGHV3-33*01  47   .....................C..............CC....G..G.....G........................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  L  A  V  I  L  S  D  G  S  S  T  N  Y  L  D  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_10821  91   ACTGGCTGGCAGTTATATTGTCTGATGGCAGCAGTACAAATTATTTAGACTCCGTGAAGGGCCGACTCACCATCTCCAGAGACAATTCCA  180
V  88.3% (218/247)  IGHV3-33*01  137  .G...G............G..A......A..T.A..A.T.C...GC...................T........................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  S  T  L  Y  L  Q  L  N  R  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  T  L  H  Y  S  P  
                    Query_10821  181  AGAGCACCCTTTATCTGCAATTGAACAGACTTAGAGTCGAAGACACGGCTGTCTATTACTGTGCGAGGGGGACACTCCACTATAGCCCCT  270
V  88.3% (218/247)  IGHV3-33*01  227  ...A...G..G.........A.......C..G....C...G...........G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD6-13*01  4    --------------------------------------------------------------------------------......----  9
J  86.4% (38/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  D  L  W  G  Q  G  S  L  V  S  V  S  S  
                    Query_10821  271  TTGACCTCTGGGGCCAGGGCTCCCTGGTCTCCGTCTCGTCAG  312
J  86.4% (38/44)    IGHJ4*02     7    .....TA............AA........A.......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_206366

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           311     4e-87
IGHD1-20*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGAATACAA	GTATAAC	GGAATA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGAATACAAGTATAACGGAATAGGTATGGACGTC	TRSEYKYNGIGMDV	236	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	20	4	0	83.3
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	121	21	19	2	0	90.5
FR3-IMGT	122	235	114	108	6	0	94.7
CDR3-IMGT (germline)	236	241	6	5	1	0	83.3
Total	N/A	N/A	227	213	14	0	93.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  V  S  N  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  
                    Query_10822  15   GTGCAGCCTCTGGGTTCACCGTAAGTAATAATTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTT  104
V  93.8% (213/227)  IGHV3-53*01  65   ......................C....GC..C.......G..................................................  154
                                         A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  

                                      --CDR2-IMGT-----><----------------------------------------------------FR3-IMGT------------
                                      Y  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  T  T  L  Y  L  Q  
                    Query_10822  105  ATAGTGGTGGTACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGACCACACTGTATCTTCAAA  194
V  93.8% (213/227)  IGHV3-53*01  155  ....C.......G..............................A............................A...G.............  244
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  

                                      ----------------------------------------><----------------CDR3-IMGT--------------->       
                                      M  N  S  L  R  A  E  D  S  A  V  Y  Y  C  T  R  S  E  Y  K  Y  N  G  I  G  M  D  V  W  G  
                    Query_10822  195  TGAACAGTTTGAGAGCCGAGGACTCGGCCGTGTATTACTGTACGAGATCAGAATACAAGTATAACGGAATAGGTATGGACGTCTGGGGCC  284
V  93.8% (213/227)  IGHV3-53*01  245  .......CC..............A.................G.....-------------------------------------------  291
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                            
D  100.0% (7/7)     IGHD1-20*01  2    ----------------------------------------------------------.......-------------------------  8
J  100.0% (45/45)   IGHJ6*02     18   -----------------------------------------------------------------------...................  36

                                                                
                                      Q  G  T  T  V  T  V  S  S 
                    Query_10822  285  AAGGGACCACGGTCACCGTCTCCTCA  310
J  100.0% (45/45)   IGHJ6*02     37   ..........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_206364

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           286     2e-79
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGAC	TATCGCAGTGGCTGGTAC	CTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTATCGCAGTGGCTGGTACCTCCTACTTTGACTAC	ATTIAVAGTSYFDY	280	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	165	57	21	0	36	36.8
FR3-IMGT	166	279	114	109	5	0	95.6
CDR3-IMGT (germline)	280	283	4	4	0	0	100
Total	N/A	N/A	283	235	12	36	83


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  A  I  S  N  N  N  N  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_10823  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCGCCATCAGCAATAATAATAATTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  83.0% (235/283)  IGHV4-39*02  49   ...................C.............T.........G..G..G.T.C....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----------------------CDR2-IMGT-----------------------><--------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  Y  L  H  N  G  G  S  Y  Y  N  P  S 
                    Query_10823  91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAATCCGTCCTATTTACATAATGGGGGCTCCTACTACAACCCGTCC  180
V  83.0% (235/283)  IGHV4-39*02  139  .....................................------------------------------------.................  192
                                       L  E  W  I  G  S  I  Y  Y  S  G  S                                      T  Y  Y  N  P  S 

                                      --------------------------------------FR3-IMGT--------------------------------------------
                                       L  E  S  R  V  T  I  S  V  D  T  S  K  N  H  F  S  L  R  L  S  S  G  T  A  A  D  T  A  V 
                    Query_10823  181  CTCGAGAGTCGAGTCACTATATCTGTAGACACGTCCAAGAACCACTTCTCCCTGAGGCTGAGCTCTGGGACCGCCGCAGACACGGCTGTG  270
V  83.0% (235/283)  IGHV4-39*02  193  ...A.............C.....C...............................A...........T......................  282
                                       L  K  S  R  V  T  I  S  V  D  T  S  K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V 

                                      --------><----------------CDR3-IMGT--------------->                                  
                                       Y  Y  C  A  T  T  I  A  V  A  G  T  S  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10823  271  TATTACTGTGCGACGACTATCGCAGTGGCTGGTACCTCCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  355
V  83.0% (235/283)  IGHV4-39*02  283  .............------------------------------------------------------------------------  295
                                       Y  Y  C  A                                                                          
D  94.4% (17/18)    IGHD6-19*01  4    -----------------...A..............--------------------------------------------------  21
J  100.0% (47/47)   IGHJ4*02     2    --------------------------------------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_111388

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-20*01                                                                                           324     8e-91
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-20*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTA	ATTACTATGAGAGTAGTGGTTA	CCAGAATTTT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTAATTACTATGAGAGTAGTGGTTACCAGAATTTTTTCGACCCT	ARSNYYESSGYQNFFDP	258	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	68	39	24	0	15	61.5
FR2-IMGT	69	119	51	48	3	0	94.1
CDR2-IMGT	120	143	24	21	3	0	87.5
FR3-IMGT	144	257	114	109	5	0	95.6
CDR3-IMGT (germline)	258	263	6	6	0	0	100
Total	N/A	N/A	263	237	11	15	90.1


Alignments

                                      <---------FR1-IMGT----------><--------------CDR1-IMGT--------------><--------------------F
                                         S  L  R  L  S  C  A  A  S  G  F  A  S  D  G  F  T  F  D  D  Y  G  M  T  W  V  R  Q  V  
                    Query_10824  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTCTGATGGATTCACCTTTGATGATTATGGCATGACATGGGTCCGCCAAGTTC  90
V  90.1% (237/263)  IGHV3-20*01  47   ................................---------------.........................GC.............C..  121
                                         S  L  R  L  S  C  A  A  S  G                 F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  

                                      R2-IMGT---------------------><-------CDR2-IMGT------><------------------------------------
                                      P  G  K  G  L  E  W  V  S  G  I  N  W  N  G  D  L  T  S  Y  A  D  S  V  K  G  R  F  T  V  
                    Query_10824  91   CAGGGAAGGGGCTGGAGTGGGTCTCTGGTATTAATTGGAATGGTGATCTCACAAGTTATGCAGACTCTGTGAAGGGCCGATTCACCGTCT  180
V  90.1% (237/263)  IGHV3-20*01  122  .............................................G.AG....G................................A...  211
                                      P  G  K  G  L  E  W  V  S  G  I  N  W  N  G  G  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  

                                      ----------------FR3-IMGT----------------------------------------------------><------------
                                      S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  F  Y  Y  C  A  R  S  N  
                    Query_10824  181  CCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAAGACACGGCCTTCTATTACTGTGCGAGAAGTAATT  270
V  90.1% (237/263)  IGHV3-20*01  212  .......................................................G...........G...C...........-------  294
                                      S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R        
D  95.5% (21/22)    IGHD3-22*01  3    ---------------------------------------------------------------------------------------...  5

                                      --------CDR3-IMGT-------------------->                                  
                                      Y  Y  E  S  S  G  Y  Q  N  F  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10824  271  ACTATGAGAGTAGTGGTTACCAGAATTTTTTCGACCCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
D  95.5% (21/22)    IGHD3-22*01  6    .......T...........-----------------------------------------------------  24
J  97.7% (42/43)    IGHJ5*02     9    -----------------------------........C..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_206368

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           392     2e-111
IGHD3-9*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACACCATACGCCGGGT	TTACGATCTTTTGACTGG	N/A	TACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACACCATACGCCGGGTTTACGATCTTTTGACTGGTACCTTGACTCC	ARGHHTPGLRSFDWYLDS	291	344	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	71	4	0	94.7
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	104	10	0	91.2
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	273	22	0	92.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S 
                    Query_10825  3    CAGGTCCAGCTTGTGCAGTCTGGAGGTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACGTTTAGC  92
V  92.5% (273/295)  IGHV1-18*01  1    .....T.....G.............C...G.....................................................C....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  K  N  G  N  T  N  Y 
                    Query_10825  93   AGATATGGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTAAAAATGGAAACACAAATTAC  182
V  92.5% (273/295)  IGHV1-18*01  91   ..C...........C....................................................C.T.C.....T........C..T  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  V  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  F  D  D 
                    Query_10825  183  GCACAGAAGGTCCAGGGAAGAGTCACCATGACGACAGACACATCCACGAGTACAGCCTACATGGAGCTGCGGAGCCTGAGATTTGACGAC  272
V  92.5% (273/295)  IGHV1-18*01  181  .........C.......C..............C.................C..................A............C.......  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  L  Y  F  C  A  R  G  H  H  T  P  G  L  R  S  F  D  W  Y  L  D  S  W  G  Q  G  T  L 
                    Query_10825  273  ACGGCCCTGTATTTCTGTGCGAGAGGACACCATACGCCGGGTTTACGATCTTTTGACTGGTACCTTGACTCCTGGGGCCAGGGAACCCTG  362
V  92.5% (273/295)  IGHV1-18*01  271  ......G......A...........-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.4% (17/18)    IGHD3-9*01   4    ------------------------------------------.......A..........------------------------------  21
J  95.7% (44/46)    IGHJ4*02     3    ------------------------------------------------------------...T......A...................  32

                                                      
                                       V  T  V  S  S  
                    Query_10825  363  GTCACCGTCTCCTCAG  378
J  95.7% (44/46)    IGHJ4*02     33   ................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_11820

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           380     1e-107
IGHD1-26*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGC	ATAGTGGGAGCTACT	TGT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGCATAGTGGGAGCTACTTGTACTTCTTTGACTAC	ARLHSGSYLYFFDY	281	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	166	21	17	4	0	81
FR3-IMGT	167	280	114	109	5	0	95.6
CDR3-IMGT (germline)	281	285	5	5	0	0	100
Total	N/A	N/A	285	264	21	0	92.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  M  Q  P  G  G  S  L  R  L  S  C  S  T  S  G  F  T  V  I  N  N
                    Query_10826  1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATGCAGCCTGGGGGGTCCCTGAGACTCTCCTGTTCGACCTCTGGATTCACCGTCATTAATAA  90
V  92.6% (264/285)  IGHV3-53*01  6    ..........G...................C..............................G.AG.......G..........G..GC..  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  Y  T  N  G  R  T  F  Y  A  D  S
                    Query_10826  91   TTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCCATTTATACCAATGGTCGCACATTCTACGCAGACTC  180
V  92.6% (264/285)  IGHV3-53*01  96   C....................................................TT.......G.GG....A......A............  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  E  M  N  S  L  R  A  A  D  T  A  V
                    Query_10826  181  CGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTGAAATGAACAGCCTGAGAGCCGCGGACACGGCCGT  270
V  92.6% (264/285)  IGHV3-53*01  186  ............A..........................................C.....................A............  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><----------------CDR3-IMGT--------------->                                  
                                        Y  Y  C  A  R  L  H  S  G  S  Y  L  Y  F  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10826  271  GTATTATTGTGCGAGGCTGCATAGTGGGAGCTACTTGTACTTCTTTGACTACTGGGGCCAGGGGGCCCTGGTCACCGTCTCCTCAG  356
V  92.6% (264/285)  IGHV3-53*01  276  ......C........-----------------------------------------------------------------------  290
                                        Y  Y  C  A                                                                          
D  100.0% (15/15)   IGHD1-26*01  4    --------------------...............---------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*02     1    --------------------------------------...A.....................AA.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_312731

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           350     8e-99
IGHD6-13*01                                                                                           18.0    0.60 
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	GGTATAGCA	ATGCCTATTACCCCGTGGATTT	GTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGTATAGCAATGCCTATTACCCCGTGGATTTGTTCGACCCC	ARDRYSNAYYPVDLFDP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  P  F  S  S  Y  G  M  H  W  V  R  Q  S  P  G  K  G  L  
                    Query_10827  1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCCCTTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGTCTCCAGGCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-33*01  47   ....................G..............A.C.................................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  D  D  G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10827  91   AGTGGGTGGCAGTGATATGGGATGATGGAAGTAATAAGTTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (237/250)  IGHV3-33*01  137  .............T......T................A.A..................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  N  D  T  A  V  Y  Y  C  A  R  D  R  Y  S  N  A  Y  
                    Query_10827  181  AGAACACTCTGTATCTACAAATGAACAGCCTGAGAGCCAATGACACGGCTGTCTATTACTGTGCGAGAGATCGGTATAGCAATGCCTATT  270
V  94.8% (237/250)  IGHV3-33*01  227  .......G........G.....................G.G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-13*01  2    ------------------------------------------------------------------------.........---------  10

                                      GT-------------------->                                  
                                      Y  P  V  D  L  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10827  271  ACCCCGTGGATTTGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (44/44)   IGHJ5*02     8    -------------............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_86115

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           343     2e-96
IGHD3-16*01                                                                                           10.3    114  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TATGA	CGGG	GGTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATATGACGGGGGTAAGGACGTC	TRYDGGKDV	244	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  I  V  S  G  D  S  I  S  T  T  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_10828  1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGACTCCATCAGCACTACTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.0% (234/249)  IGHV4-39*01  49   ...................C...........G...........G..G...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  G  I  Y  Y  T  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10828  91   CTGGAGTGGATTGGGGGTATCTATTATACTGGGAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  94.0% (234/249)  IGHV4-39*01  139  ...............A............G.....G..........................................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                       K  N  Q  F  Y  L  E  L  S  S  V  T  A  A  D  T  A  A  Y  F  C  T  R  Y  D  G  G  K  D  V 
                    Query_10828  181  AAGAACCAGTTTTACCTGGAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGCGTATTTTTGTACGAGATATGACGGGGGTAAGGACGTC  270
V  94.0% (234/249)  IGHV4-39*01  229  ...........C.C....A.................................T.....AC...G.....---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-16*01  5    ---------------------------------------------------------------------.....----------------  9
J  97.8% (44/45)    IGHJ6*02     18   ------------------------------------------------------------------------------....T.......  29

                                                                       
                                       W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10828  271  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  303
J  97.8% (44/45)    IGHJ6*02     30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_351265

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            325     3e-91
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCTA	TATTACTATGAAAGTAGTGGTT	CAT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCTATATTACTATGAAAGTAGTGGTTCATACTTCTTTGACTAC	ARSLYYYESSGSYFFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  D  S  I  S  N  S  R  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10829  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCATCAGTAATTCTAGGTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  92.3% (227/246)  IGHV4-4*02   49   ...............................G.........C.G.AG..AC...................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  H  H  S  G  T  A  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  K  S  K 
                    Query_10829  91   GAGTGGATTGGAGACATCCATCATAGTGGGACCGCCAACTACAATCCGTCCCTCAAGAGTCGAGTCACCCTCTCAGTAGACAAGTCCAAG  180
V  92.3% (227/246)  IGHV4-4*02   139  ...........G..A...T............G.A..........C........................A.A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       K  R  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  Y  E  S  S 
                    Query_10829  181  AAGCGGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAAGCCTATATTACTATGAAAGTAGT  270
V  92.3% (227/246)  IGHV4-4*02   229  ..C.A.................G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  95.5% (21/22)    IGHD3-22*01  2    ------------------------------------------------------------------------...........T......  19

                                      -------------------->                                  
                                       G  S  Y  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10829  271  GGTTCATACTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  95.5% (21/22)    IGHD3-22*01  20   ....---------------------------------------------------  23
J  97.9% (47/48)    IGHJ4*02     1    -------...A............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_24688

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           294     6e-82
IGHD3-10*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTTTCAGG	TACTATGGTTCGG	CGGATTCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTTCAGGTACTATGGTTCGGCGGATTCT	ARAFRYYGSADS	235	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	120	21	17	1	3	81
FR3-IMGT	121	234	114	101	13	0	88.6
CDR3-IMGT (germline)	235	241	7	7	0	0	100
Total	N/A	N/A	244	218	23	3	89.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  D  S  Y  F  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10830  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCAGTGATTCGTACTTCAGCTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  89.3% (218/244)  IGHV4-59*01  49   ...................C...........G..........AG..AC....GG.......................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y     S  G  S  S  S  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  I  S  K  T 
                    Query_10830  91   TGGATTGGGTATATCTAT---AGTGGGAGCTCCAGCTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCCGACATATCCAAGACC  177
V  89.3% (218/244)  IGHV4-59*01  139  ..................TAC.........A...A......................................TA....CG.......A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  T  Y  Y  C  A  R  A  F  R  Y  Y  G  S  A  D 
                    Query_10830  178  CACTTCTCCCTGAGGTTGACCTCTGTGACCGCTGCGGACACGGCCACATATTACTGTGCGAGAGCTTTCAGGTACTATGGTTCGGCGGAT  267
V  89.3% (218/244)  IGHV4-59*01  229  ..G..........A.C...G.........................GTG................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD3-10*01  5    ------------------------------------------------------------------------.............-----  17

                                      -->                                  
                                       S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10830  268  TCTTGGGGCCAGGGAGCCCTCGTCACCGTCTCCTCAG  304
J  94.1% (32/34)    IGHJ4*02     15   ---............A....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_24689

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            336     1e-94
IGHD3-10*01                                                                                           12.2    34   
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	GGGACACCCAGAGATGGCGCAGTCAC	TTCGGG	AAGGAAGCGGTCCTCATCCCGGGGGCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGGGACACCCAGAGATGGCGCAGTCACTTCGGGAAGGAAGCGGTCCTCATCCCGGGGGCCTC	VRGHPEMAQSLREGSGPHPGGL	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10831  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTTAGTGCCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-7*03   47   .....................................C......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  G  N  I  K  Q  D  G  G  D  K  Y  Y  L  G  S  V  K  G  R  F  T  I  S  R  D  N  V  
                    Query_10831  91   AGTGGGTGGGCAACATAAAGCAAGATGGAGGTGACAAATACTATTTGGGCTCTGTGAAGGGCCGATTCACCATATCCAGAGACAACGTCA  180
V  93.5% (231/247)  IGHV3-7*03   137  .........C...................A....G.........G...A........................C.............C..  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      N  N  S  L  Y  L  Q  M  N  N  V  R  A  E  D  T  A  V  Y  Y  C  V  R  G  H  P  E  M  A  Q  
                    Query_10831  181  ACAACTCACTGTATCTGCAAATGAACAACGTGAGAGCCGAGGACACGGCCGTCTATTACTGCGTGAGGGGACACCCAGAGATGGCGCAGT  270
V  93.5% (231/247)  IGHV3-7*03   227  .G.........................G.C......................G........T.C...-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      -CDR3-IMGT--------------------------->                                  
                                      S  L  R  E  G  S  G  P  H  P  G  G  L  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_10831  271  CACTTCGGGAAGGAAGCGGTCCTCATCCCGGGGGCCTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  342
D  100.0% (6/6)     IGHD3-10*01  13   ---......---------------------------------------------------------------  18
J  97.1% (34/35)    IGHJ4*02     14   -------------------------------------......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_351260

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            318     5e-89
IGHD3-16*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCAGCCTGATCGGGACAG	TGCTTAT	N/A	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCAGCCTGATCGGGACAGTGCTTATTAC	ASQPDRDSAYY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	22	5	0	81.5
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  I  S  G  V  S  F  S  R  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_10832  1    GGTCCCTGAGACTCTCCTGCGCTATATCTGGTGTCTCCTTCAGTAGAAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGAC  90
V  91.1% (225/247)  IGHV4-4*02   47   ..A.....TCC...A........G.C.......G....A....C..T.G.......................................G.  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  S  D  S  G  S  T  N  Y  N  E  S  L  K  S  R  V  T  I  S  I  D  K  S  
                    Query_10832  91   TGGAGTGGATTGGGGAAATCTCTGATAGTGGGAGCACCAACTACAACGAGTCTCTCAAGAGTCGAGTCACCATATCAATAGACAAGTCCA  180
V  91.1% (225/247)  IGHV4-4*02   137  .....................A.C.......................CC...C........................G............  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  H  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  Q  P  D  R  D  S  A  
                    Query_10832  181  AGAACCAATTCTCCCTGCATCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGCCAGCCTGATCGGGACAGTGCTT  270
V  91.1% (225/247)  IGHV4-4*02   227  .......G.........A.G...............................................-----------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  28   -------------------------------------------------------------------------------------.....  32

                                      ---->                                  
                                      Y  Y  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_10832  271  ATTACTGGGGCCAGGGAACCCTGGCCACCGTCTCCTCAG  309
D  100.0% (7/7)     IGHD3-16*01  33   ..-------------------------------------  34
J  97.3% (36/37)    IGHJ4*02     12   --......................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_351261

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           316     2e-88
IGHD2-21*01                                                                                           10.3    123  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTTATCCTT	CATAT	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTTATCCTTCATATAACTACGGTATGGACGCC	ARSYPSYNYGMDA	255	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	254	129	106	8	15	82.2
CDR3-IMGT (germline)	255	260	6	6	0	0	100
Total	N/A	N/A	260	233	12	15	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10833  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAATTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.6% (233/260)  IGHV3-53*01  47   .................................................C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><------------------------------------------------------
                                      E  W  V  S  L  I  Y  S  G  P  S  T  Y  D  A  E  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  
                    Query_10833  91   AGTGGGTCTCACTTATTTATAGCGGTCCTAGCACATACGACGCAGAGACACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCA  180
V  89.6% (233/260)  IGHV3-53*01  137  ...........G..............GG........---------------.............C.........................  211
                                      E  W  V  S  V  I  Y  S  G  G  S  T                 Y  Y  A  D  S  V  K  G  R  F  T  I  S  

                                      -----FR3-IMGT------------------------------------------------------------><--------------C
                                      R  D  N  R  K  N  T  L  Y  L  Q  L  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  Y  P  
                    Query_10833  181  GGGACAATCGCAAGAACACACTGTATCTTCAATTGCACAGTCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGATCTTATCCTT  270
V  89.6% (233/260)  IGHV3-53*01  212  .A......TC.........G............A..A....C.......................................----------  291
                                      R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R           

                                      DR3-IMGT-------------->                                 
                                      S  Y  N  Y  G  M  D  A  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10833  271  CATATAACTACGGTATGGACGCCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
D  100.0% (5/5)     IGHD2-21*01  3    .....---------------------------------------------------  7
J  98.0% (49/50)    IGHJ6*02     13   ------...............T..................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_351262

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           396     2e-112
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCCCGGCAGG	GTGGGATCTACT	TG	ACGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTC	ARHGPAGWDLLDAMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  N  F  N  S  N
                    Query_10834  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGTTCTGGATACAACTTTAACAGTAA  90
V  93.5% (272/291)  IGHV5-51*01  6    ....................................C.............A..........................G.....C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_10834  91   CTGGATCGGATGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACCAGATATAGGCC  180
V  93.5% (272/291)  IGHV5-51*01  96   .........C..................................................T.......................C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  T  A  D  K  S  T  T  T  A  Y  L  R  W  S  S  L  K  A  S  D  P  A
                    Query_10834  181  GTCCTTCCAAGGCCACGTCACCATTACAGCCGACAAGTCCACCACCACCGCCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACCCCGC  270
V  93.5% (272/291)  IGHV5-51*01  186  ...............G........CT...............T..G..............A.........................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        T  Y  Y  C  A  R  H  G  P  A  G  W  D  L  L  D  A  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_10834  271  CACTTATTACTGTGCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  93.5% (272/291)  IGHV5-51*01  276  ..TG.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD1-26*01  7    ---------------------------------......G.....---------------------------------------------  18
J  97.9% (46/47)    IGHJ6*02     16   -----------------------------------------------...G.......................................  58

                                          
                                        S 
                    Query_10834  361  CTCA  364
J  97.9% (46/47)    IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_351263

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         343     2e-96
IGHD3-10*01                                                                                           10.3    116  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GA	GGGGA	CAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAGGGGACATTATGGACGTC	ARGGDIMDV	246	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_10835    4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGCC  93
V  94.0% (234/249)  IGHV4-30-2*01  50   .....TCC...A....C.........................................................................  139
                                           L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  H  H  S  G  L  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  R  S  
                    Query_10835    94   TGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACAGGTCCA  183
V  94.0% (234/249)  IGHV4-30-2*01  140  .............G......T...........AG..C.T...A......................G........................  229
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  

                                        -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                        K  N  Q  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  D  I  M  D  V  
                    Query_10835    184  AGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAGGGGACATTATGGACGTCT  273
V  94.0% (234/249)  IGHV4-30-2*01  230  ..........C.......A..................................................---------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01    16   -----------------------------------------------------------------------.....--------------  20
J  100.0% (43/43)   IGHJ6*02       20   -------------------------------------------------------------------------------...........  30

                                                                        
                                        W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10835    274  GGGGCCAAGGGACCACGGTCACCGTCTCCTCA  305
J  100.0% (43/43)   IGHJ6*02       31   ................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_24682

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            297     7e-83
IGHD1-26*01                                                                                           10.3    119  
IGHJ6*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACTTTCGCTTCGC	ACTAC	CTACATT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACTTTCGCTTCGCACTACCTACATTTGGACGTC	ARTFASHYLHLDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	218	28	0	88.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T  T  N  Q  W  W  T  W  V  R  Q  P  P  G  G  G  L 
                    Query_10836  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCACTAATCAGTGGTGGACTTGGGTCCGCCAGCCCCCAGGGGGGGGGCTG  90
V  88.6% (218/246)  IGHV4-4*01   49   ........................................G..G..G.A.C.......G......................AA.......  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  F  P  N  G  N  T  N  Y  S  P  S  L  K  S  R  L  T  I  S  M  A  K  S  K 
                    Query_10836  91   GAGTGGATTGGTGAAATTTTTCCTAATGGAAACACCAACTACAGCCCGTCCCTCAAGAGTCGACTCACCATTTCAATGGCTAAGTCCAAG  180
V  88.6% (218/246)  IGHV4-4*01   139  ...........G.....C.A..A..G...G.G...........A...................G.......A...G.A.AC.........  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  V  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  T  F  A  S  H  Y  L  H 
                    Query_10836  181  AACCAGGTCTCCCTGAAACTTAACTCTGTGACGGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAACTTTCGCTTCGCACTACCTACAT  270
V  88.6% (218/246)  IGHV4-4*01   229  ......T..........G..G.G.........C......................G..........------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (5/5)     IGHD1-26*01  16   -------------------------------------------------------------------------------.....------  20

                                      -------->                              
                                       L  D  V  W  G  Q  G  A  T  V  G  V  S 
                    Query_10836  271  TTGGACGTCTGGGGCCAAGGGGCCACGGTCGGCGTCTCC  309
J  92.1% (35/38)    IGHJ6*02     22   -....................A........AC.......  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_24680

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            332     4e-93
IGHD3-3*01                                                                                            23.8    0.012
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAGTATGGTTCGGGTG	GATTTTCGGAGTGGT	CCCCCTTCTACTTCAG	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGAGTATGGTTCGGGTGGATTTTCGGAGTGGTCCCCCTTCTACTTCAGCGGTTTGGACGTC	ARDEYGSGGFSEWSPFYFSGLDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  H  W  M  S  W  V  R  Q  A  P  G  K  G  P  
                    Query_10837  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTAGTTTTAGTAGCCATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  92.4% (231/250)  IGHV3-7*03   47   ..................................C.CC.........T..........C............................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  V  Q  D  G  T  K  R  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  G  
                    Query_10837  91   AGTGGGTGGCCAGCATAGTGCAAGATGGAACTAAGAGATATTACGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGGCG  180
V  92.4% (231/250)  IGHV3-7*03   137  ............A....AA...........G.G...A...C..T...........................................C.A  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  G  D  D  T  A  V  Y  Y  C  A  R  D  E  Y  G  S  G  G  
                    Query_10837  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGGCGACGACACGGCCGTCTATTACTGTGCGAGAGATGAGTATGGTTCGGGTGGAT  270
V  92.4% (231/250)  IGHV3-7*03   227  ....................................C...G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD3-3*01   8    ---------------------------------------------------------------------------------------...  10

                                      --CDR3-IMGT----------------------------->                                 
                                      F  S  E  W  S  P  F  Y  F  S  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10837  271  TTTCGGAGTGGTCCCCCTTCTACTTCAGCGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
D  93.3% (14/15)    IGHD3-3*01   11   ...T........--------------------------------------------------------------  22
J  97.8% (45/46)    IGHJ6*02     17   ----------------------------....A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_351268

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-20*01                                                                                           347     7e-98
IGHD3-10*01                                                                                           10.3    116  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-20*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TGAGGTC	GAGTT	C	GCTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATGAGGTCGAGTTCGCTCTTGATATC	ARDEVEFALDI	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  S  S  G  F  T  F  S  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10838  1    GGTCCCTGAGACTCTCCTGTGCAAGCTCCGGATTCACCTTTAGCGATTATGGCATGAGTTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-20*01  47   .......................GC...T............GAT..............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  N  G  V  N  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10838  91   AGTGGGTCTCTGGTATTAATTGGAATGGAGTTAATACAGGTTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-20*01  137  ............................T.G..GC.......................................................  226
                                      E  W  V  S  G  I  N  W  N  G  G  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  T  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  E  V  E  F  A  L  
                    Query_10838  181  AGAACTCCCTGTATCTGCAAATGACCAGTCTGAGAGCCGAGGACACGGCCTTGTATTACTGTGCGAGGGATGAGGTCGAGTTCGCTCTTG  270
V  94.4% (236/250)  IGHV3-20*01  227  ........................A...............................C..........A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  19   -----------------------------------------------------------------------------.....--------  23
J  93.3% (42/45)    IGHJ3*02     5    -----------------------------------------------------------------------------------...T...  11

                                      ---->                                 
                                      D  I  W  G  Q  G  T  K  V  T  V  S  S 
                    Query_10838  271  ATATCTGGGGCCAAGGGACAAAGGTCACCGTCTCCTCA  308
J  93.3% (42/45)    IGHJ3*02     12   .....................T............T...  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_351269

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            339     2e-95
IGHD1-26*01                                                                                           18.0    0.60 
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAACAGTTTGTTGGCACCTG	AGTGGGAGC	CTGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACAGTTTGTTGGCACCTGAGTGGGAGCCTGATGATGCTTTTGATATC	ARVNSLLAPEWEPDDAFDI	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  R  S  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10839  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGCAGAAGCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.9% (232/247)  IGHV4-4*02   49   ...............................G............T..T.A........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  N  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  K  S  K 
                    Query_10839  91   GAGTGGATTGGGGAGATCTATCATGGTGGGAATACCAACTACAACCCGTCCCTCAAGAGTCGACTTACTATATCAGTAGACAAGTCCAAG  180
V  93.9% (232/247)  IGHV4-4*02   139  ..............A.........A......GC..............................G.C..C.....................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       N  Q  F  S  L  Q  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  S  L  L  A  P  E 
                    Query_10839  181  AACCAATTCTCCCTGCAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGAGAGTTAACAGTTTGTTGGCACCTGAG  270
V  93.9% (232/247)  IGHV4-4*02   229  .....G.........A.......C..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD1-26*01  6    ----------------------------------------------------------------------------------------..  7

                                      MGT----------------------->                                  
                                       W  E  P  D  D  A  F  D  I  W  G  Q  G  T  L  A  I  V  S  S  
                    Query_10839  271  TGGGAGCCTGATGATGCTTTTGATATCTGGGGCCAAGGGACATTGGCCATCGTCTCTTCAG  331
D  100.0% (9/9)     IGHD1-26*01  8    .......------------------------------------------------------  14
J  94.0% (47/50)    IGHJ3*02     1    -----------...............................A...T..C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_24684

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGATGGA	ATTACTAT	CAAACGAAGCA	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCGATGGAATTACTATCAAACGAAGCAATGGTTTTGATATA	TRGDGITIKRSNGFDI	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_10840  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGGCTTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  94.7% (233/246)  IGHV3-53*01  47   ................................................A.......AGC......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_10840  91   AGTGGGTCTCAGTTATTTACAGCGGTGGTACCACATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.7% (233/246)  IGHV3-53*01  137  ...................T..........G........A..................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  L  Y  Y  C  T  R  G  D  G  I  T  I  K  R  
                    Query_10840  181  ACACGCTGTATCTTCAAATGCACAGCCTGAGAGCCGACGACACGGCCCTGTACTACTGTACGAGAGGCGATGGAATTACTATCAAACGAA  270
V  94.7% (233/246)  IGHV3-53*01  227  ....................A................G.........G....T......G......------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  3    --------------------------------------------------------------------------........--------  10

                                      ---------------->                                  
                                      S  N  G  F  D  I  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_10840  271  GCAATGGTTTTGATATATGGGGCCAAGGGACACTGGTCTCCGTCTCTTCAG  321
J  91.7% (44/48)    IGHJ3*02     3    ---...C.........C...............A.....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_25559

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           391     6e-111
IGHD2-15*01                                                                                           14.1    9.8   
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TT	TAGCTGC	GGTGAGTCCGAGTAGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTGCGGTGAGTCCGAGTAGTTTCTACTACGGTTTGGACGTC	ARDLAAVSPSSFYYGLDV	290	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	70	5	0	93.3
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	296	273	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  Y  G  Y  T  F  S 
                    Query_10841  2    CAGGTCCAGCTTGTGCAGTCCGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCTTATGGTTACACCTTTAGC  91
V  92.2% (273/296)  IGHV1-18*04  1    .....T.....G........T................................................G...C..............C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  D  T  S  Y 
                    Query_10841  92   AGTTACGGTATCACCTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGCTGGATCAGCGGTTATAATGGTGACACAAGCTAT  181
V  92.2% (273/296)  IGHV1-18*04  91   ..C..........G.........A..............A.................A..........C...C......A......A....  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  S  D  D 
                    Query_10841  182  GCACAGATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGATCTGACGAC  271
V  92.2% (273/296)  IGHV1-18*04  181  .......A.C...A..G.................C....................C..........C.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  W  A  R  D  L  A  A  V  S  P  S  S  F  Y  Y  G  L  D  V  W  G  Q  G  T  T 
                    Query_10841  272  ACGGCCGTGTATTACTGGGCGAGAGATTTAGCTGCGGTGAGTCCGAGTAGTTTCTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACG  361
V  92.2% (273/296)  IGHV1-18*04  271  .................T........----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD2-15*01  19   ----------------------------.......-------------------------------------------------------  25
J  98.1% (51/52)    IGHJ6*02     11   -----------------------------------------------------..........A..........................  47

                                                     
                                       V  T  V  S  S 
                    Query_10841  362  GTCACCGTCTCCTCA  376
J  98.1% (51/52)    IGHJ6*02     48   ...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_25558

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           318     6e-89
IGHD3-16*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	VRTRHIDGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10842  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  90.8% (226/249)  IGHV4-61*01  49   .......................C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S 
                    Query_10842  91   CTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  90.8% (226/249)  IGHV4-61*01  139  ....A.........GT............G......CAC..A.........................G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  T  R  H  I  D  G  Y 
                    Query_10842  181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGTGAGAACACGGCACATTGATGGTTAT  270
V  90.8% (226/249)  IGHV4-61*01  229  ..G................A.................................G..........C....---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------------.....  28

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_10842  271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
D  100.0% (7/7)     IGHD3-16*02  29   ..--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_257635

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*05                                                                                           344     6e-97
IGHD6-13*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*05	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	N/A	GCAGCAGATGG	CATCTCCGGGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGAGCAGCAGATGGCATCTCCGGGGTTTGACTCC	ATEQQMASPGFDS	249	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	256	8	6	2	0	75
Total	N/A	N/A	256	238	18	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10843  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTCACGCCTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.0% (238/256)  IGHV3-15*05  47   .......T....................................A............G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  K  K  T  D  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_10843  91   AGTGGGTTGGCCGTATTAAAAAGAAGACTGACGGTGAGACAACAGACTACGCTGCGCCCGTTAAAGGCAGATTCACCATCTCAAGAGATG  180
V  93.0% (238/256)  IGHV3-15*05  137  .....................GC..A.....T....G..................A.....G............................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      D  S  K  A  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  G  V  Y  Y  C  A  T  E  Q  Q  M  A  
                    Query_10843  181  ATTCAAAAGCCACATTGTATCTGCAAATGAACAGTCTGAAAACCGAGGACACAGGTGTGTATTACTGTGCGACAGAGCAGCAGATGGCAT  270
V  93.0% (238/256)  IGHV3-15*05  227  ........AA...GC.......................................CC............A.C.....--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  90.9% (10/11)    IGHD6-13*01  8    ----------------------------------------------------------------------------.......C...---  18

                                      GT-------------->                                  
                                      S  P  G  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10843  271  CTCCGGGGTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.7% (42/43)    IGHJ4*02     6    --------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_257632

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           346     2e-97
IGHD6-19*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GGGCCCCCG	GCAGTGGCTGGTAC	CGGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGGGGCCCCCGGCAGTGGCTGGTACCGGGTTGACTAC	TTGAPGSGWYRVDY	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	24	6	0	80
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	238	17	0	93.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10844  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTCATGCCTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.3% (238/255)  IGHV3-15*01  47   .......T....................................A.C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  Q  I  D  G  E  T  E  D  Y  A  A  P  V  K  G  R  F  V  I  S  R  D  
                    Query_10844  91   AATGGGTTGGCCGTATTAAAAGTCAAATTGATGGTGAGACAGAAGACTACGCTGCACCCGTGAAAGGCAGATTCGTCATCTCAAGAGATG  180
V  93.3% (238/255)  IGHV3-15*01  137  .G....................CA...C........G....AC...............................AC..............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  I  E  D  T  A  V  Y  Y  C  T  T  G  A  P  G  S  
                    Query_10844  181  ATTCAAAAAACACCCTGTATTTGCAAATGAACAGCCTGAAAATCGAGGACACAGCCGTATATTACTGTACCACAGGGGCCCCCGGCAGTG  270
V  93.3% (238/255)  IGHV3-15*01  227  .............G......C.....................C...............G................---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (14/14)   IGHD6-19*01  8    ------------------------------------------------------------------------------------......  13

                                      IMGT--------------->                                  
                                      G  W  Y  R  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10844  271  GCTGGTACCGGGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (14/14)   IGHD6-19*01  14   ........----------------------------------------------  21
J  100.0% (42/42)   IGHJ4*02     7    ------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_327171

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           364     5e-103
IGHD3-16*01                                                                                           12.2    35    
IGHJ6*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCC	TTGGGG	CGGC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCTTGGGGCGGCCTACGGTTTGGACGTC	ARPLGAAYGLDV	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	261	28	0	90.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  D  S  L  T  I  S  C  Q  V  S  G  Y  I  F  T  H  Y
                    Query_10845  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCGGGGGACTCTCTGACGATCTCCTGTCAGGTTTCTGGATACATCTTCACCCACTA  90
V  90.3% (261/289)  IGHV5-51*03  6    ...............................A..........G.......A..........A...G...........G...T...AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  V  A  G  K  G  L  E  W  M  G  V  I  Y  P  D  D  S  D  A  R  Y  S  P
                    Query_10845  91   TTGGATCGCCTGGGTGCGCCAGGTGGCCGGCAAAGGCCTAGAGTGGATGGGGGTCATCTATCCTGACGACTCTGATGCCAGATACAGCCC  180
V  90.3% (261/289)  IGHV5-51*03  96   C.......G.............A..C....G........G............A............GT.........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  L  V  T  I  S  V  D  K  S  L  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_10845  181  GTCCTTTCAAGGCCTGGTCACCATCTCAGTCGACAAGTCCCTCAGTACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  90.3% (261/289)  IGHV5-51*03  186  ......C.......A..............C..........A....C....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  F  C  A  R  P  L  G  A  A  Y  G  L  D  V  W  G  Q  G  T  A  V  V  V  S  S 
                    Query_10845  271  CATTTACTTCTGTGCGAGACCCCTTGGGGCGGCCTACGGTTTGGACGTCTGGGGCCAAGGGACCGCGGTCGTCGTCTCGTCA  352
V  90.3% (261/289)  IGHV5-51*03  276  ...G..T.A..........---------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                
D  100.0% (6/6)     IGHD3-16*01  16   -----------------------......-----------------------------------------------------  21
J  89.8% (44/49)    IGHJ6*02     14   ---------------------------------.......A.......................A.....AC......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_257630

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           377     1e-106
IGHD3-16*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACAAGCGGGCGGCACC	TTTGGGG	CGGGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGGGCGACTAC	ARGQAGGTFGAGDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	265	24	0	91.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  S  F  N  D  Y 
                    Query_10846  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAATGAAGGTCTCCTGCAAGGCTTCCGGTTACAGCTTTAACGACTAT  91
V  91.7% (265/289)  IGHV1-18*01  7    .............................................G......................T.......C.....C.AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  M  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  A  Y  N  G  N  T  K  Y  S  E 
                    Query_10846  92   GGTATCACTTGGATGCGACAGGCCCCTGGACAGGGGCCTGAGTGGATGGGATGGATCAGCGCATATAATGGTAACACAAAGTATTCAGAG  181
V  91.7% (265/289)  IGHV1-18*01  97   .......GC...G...................A....T........................T..C..............C...G..C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  L  Q  G  R  L  I  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  G  T  A 
                    Query_10846  182  AGGCTCCAGGGCAGACTCATCATGACCACAGACACATCCACGAGCACAGCCTACATGGAATTGAGGAGCCTGAGATCTGACGGCACGGCC  271
V  91.7% (265/289)  IGHV1-18*01  187  .A.............G...C.......................................GC.....................A.......  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  G  Q  A  G  G  T  F  G  A  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10846  272  GTCTATTATTGTGCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGGGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  91.7% (265/289)  IGHV1-18*01  277  ..G.....C..........---------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD3-16*01  15   ------------------------------------.......---------------------------------------------  21
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_257631

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           294     6e-82
IGHD6-13*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TCCAGGGAGGTGGG	GCACCAGCTGGT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATCCAGGGAGGTGGGGCACCAGCTGGTACTACTTTGACTAC	AKDPGRWGTSWYYFDY	237	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	21	3	0	87.5
FR3-IMGT	123	236	114	103	11	0	90.4
CDR3-IMGT (germline)	237	244	8	7	1	0	87.5
Total	N/A	N/A	232	210	22	0	90.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  S  T  T  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  E  I  
                    Query_10847  13   GTACAGCCTCTGGATTCACCTTCAGTACCACTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGGAGTGGGTGGCAGAGATAT  102
V  90.5% (210/232)  IGHV3-30*18  65   ..G........................G.TA....................................G................TT....  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  Y  D  G  M  N  T  Y  Y  P  D  S  V  K  G  R  F  T  I  S  R  D  K  V  K  N  I  L  Y  L  
                    Query_10847  103  CATATGATGGAATGAATACATACTATCCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAAGGTCAAGAACATTCTGTATCTGC  192
V  90.5% (210/232)  IGHV3-30*18  155  ............GT....A.......G.......C................................TTC........CG..........  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  I  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  P  G  R  W  G  T  S  W  Y  Y  F  D  
                    Query_10847  193  AAATGATCAGCCTGAGACCTGAGGACACGGCTGTCTATTATTGTGCGAAGGATCCAGGGAGGTGGGGCACCAGCTGGTACTACTTTGACT  282
V  90.5% (210/232)  IGHV3-30*18  245  ......A..........G................G.....C........A..--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  91.7% (11/12)    IGHD6-13*01  8    ------------------------------------------------------------------...G........------------  19
J  97.9% (47/48)    IGHJ4*02     1    ------------------------------------------------------------------------------............  12

                                      ->                                  
                                      Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_10847  283  ACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.9% (47/48)    IGHJ4*02     13   .........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_25551

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD6-19*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TTCCTCT	TGGCTGG	GACC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATTCCTCTTGGCTGGGACCTGATGCTTTTCAAATC	ARDSSWLGPDAFQI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10848  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGAAGTTACTACTGGAATTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ...............................G.........T.............GC.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  S  G  T  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  G  D  T  S  K  N 
                    Query_10848  91   TGGATTGGGTATATGTATTACAGTGGGACTACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGGAGACACGTCTAAGAAC  180
V  93.1% (228/245)  IGHV4-59*01  139  ..............C.............GC.....................A.....................T.........C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  F  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  L  G  P  D  A 
                    Query_10848  181  CAATTTTTCCTGACGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGGGATTCCTCTTGGCTGGGACCTGATGCT  270
V  93.1% (228/245)  IGHV4-59*01  229  ..G..C.C.....A.C.....................................C........A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD6-19*01  12   ------------------------------------------------------------------------.......-----------  18
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------------------.......  7

                                      -------->                                  
                                       F  Q  I  W  G  Q  G  T  I  V  T  V  S  S  
                    Query_10848  271  TTTCAAATCTGGGGCCAGGGGACAATTGTCACCGTGTCTTCAG  313
J  90.0% (45/50)    IGHJ3*02     8    ...G.T...........A........G........C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_25555

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD3-3*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TCGTCAAGATCGCAGTCTTTATCGCTACCTCA	GAGTGGTT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATCGTCAAGATCGCAGTCTTTATCGCTACCTCAGAGTGGTTTTTGACCTC	AKDRQDRSLYRYLRVVFDL	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  S  Y  V  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10849  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAGCAGCTATGTCATGAGCTGGGTTCGGCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-23*01  47   .....................C.............................C............C..C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  S  E  S  G  V  S  T  Y  I  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10849  91   AGTGGGTCGCAGCTATTAGCGAAAGTGGCGTCAGTACATATATCGCGGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  90.4% (226/250)  IGHV3-23*01  137  ........T..........T.GT.....T.GT..C.....CTA...A...........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      N  N  T  I  Y  L  Q  M  S  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  R  Q  D  R  S  L  
                    Query_10849  181  ACAACACGATATATCTGCAAATGTCCAGCCTGAGAGCCGAGGACACGGCCCTTTATTACTGTGCGAAGGATCGTCAAGATCGCAGTCTTT  270
V  90.4% (226/250)  IGHV3-23*01  227  .G......C.G............AA.........................G.A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Y  R  Y  L  R  V  V  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10849  271  ATCGCTACCTCAGAGTGGTTTTTGACCTCTGGGGCCAGGGAACCCTGGTCACAGTCTCCTCAG  333
D  100.0% (8/8)     IGHD3-3*01   16   ------------........-------------------------------------------  23
J  93.0% (40/43)    IGHJ4*02     6    --------------------......TA........................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_25554

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD1-1*01                                                                                            14.1    7.9  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_10850  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_10850  91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_10850  181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_10850  271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_257638

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           305     3e-85
IGHD3-10*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	GACCAAGG	GGTTCGGGGACTTA	CTGCAGCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGACCAAGGGGTTCGGGGACTTACTGCAGCCCTTTGACCAC	VRTKGFGDLLQPFDH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	221	26	0	89.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  T  S  G  F  T  L  S  S  S  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10851  1    GGTCCCTGAGACTCTCCTGTGAAACCTCTGGATTCACCTTGAGTAGTTCCACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.5% (221/247)  IGHV3-21*01  47   .....................C.G................C.....C.AT.G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  A  A  S  I  T  S  G  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10851  91   AGTGGGCCGCATCTATTACCAGTGGAAGCACTTACATCTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  89.5% (221/247)  IGHV3-21*01  137  ......T.T....C....GT...A.T..T.G......A....................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  L  S  G  L  R  V  E  D  T  A  V  Y  S  C  V  R  T  K  G  F  G  D  L  
                    Query_10851  181  AGAACTCACTGTTTCTGCAACTGAGTGGCCTGAGAGTCGAGGACACGGCTGTCTATTCCTGTGTGAGGACCAAGGGGTTCGGGGACTTAC  270
V  89.5% (221/247)  IGHV3-21*01  227  ............A.......A...ACA.........C...............G....A.....C...-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD3-10*01  11   ---------------------------------------------------------------------------..........G...-  24

                                      ---------------->                                  
                                      L  Q  P  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10851  271  TGCAGCCCTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.7% (43/44)    IGHJ4*02     5    -------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_25556

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           327     9e-92
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTCTGTCGG	CTAAGGTGACTAC	GGGGGT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTCTGTCGGCTAAGGTGACTACGGGGGTCTTTGACTTC	AKVLSAKVTTGVFDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  S  F  N  N  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10852  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCAGTTTTAACAACTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-23*01  47   .....................C..............CC....G..G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  S  G  R  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10852  91   AGTGGGTCTCAGTTATTAGTGGGAGTGGGAGGAGTACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.0% (229/249)  IGHV3-23*01  137  ............C.........T.....TG.T..C.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  K  M  L  F  L  E  L  N  S  L  R  A  E  D  S  A  V  Y  F  C  A  K  V  L  S  A  K  V  T  
                    Query_10852  181  AGAAAATGCTGTTTCTGGAATTGAACAGCCTCAGAGCCGAGGACTCGGCCGTATATTTCTGTGCGAAAGTTCTGTCGGCTAAGGTGACTA  270
V  92.0% (229/249)  IGHV3-23*01  227  ....C.C.....A....C..A..........G............A............A...........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.3% (12/13)    IGHD4-17*01  4    ------------------------------------------------------------------------------...C........  15

                                      ---------------->                                  
                                      T  G  V  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10852  271  CGGGGGTCTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  92.3% (12/13)    IGHD4-17*01  16   .--------------------------------------------------  16
J  97.7% (43/44)    IGHJ4*02     5    -------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_158429

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           327     9e-92
IGHD6-6*01                                                                                            19.9    0.15 
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-6*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCC	AGTATAGAAGATCGTC	GGCTGGT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCAGTATAGAAGATCGTCGGCTGGTTGCTTTTGATATC	ARPSIEDRRLVAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  R  G  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  Q 
                    Query_10853  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGGGGTTACTACTGGAGCTGGGTCCGTCAGCCCCCAGGGAAGGGGCTGCAG  90
V  93.0% (226/243)  IGHV4-34*01  49   .........................................T..................A....C.....................G..  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  I  N  H  R  G  S  S  Y  H  S  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_10853  91   TGGCTTGGCGAAATCAACCATAGAGGAAGTAGCTATCACAGCCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGTCCAAGAAC  180
V  93.0% (226/243)  IGHV4-34*01  139  ...A....G........T.....T.....C.C.A.CT...A...........................A.....A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  S  I  E  D  R  R  L  V 
                    Query_10853  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGACCCAGTATAGAAGATCGTCGGCTGGTT  270
V  93.0% (226/243)  IGHV4-34*01  229  ...............................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (14/16)    IGHD6-6*01   2    ------------------------------------------------------------------.......C..C.....--------  17
J  100.0% (47/47)   IGHJ3*02     4    -----------------------------------------------------------------------------------------.  4

                                      ----------->                                  
                                       A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10853  271  GCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  316
J  100.0% (47/47)   IGHJ3*02     5    ..............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_158427

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGATGGA	ATTACTAT	CAAACGAAGCA	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCGATGGAATTACTATCAAACGAAGCAATGGTTTTGATATA	TRGDGITIKRSNGFDI	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_10854  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGGCTTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  94.7% (233/246)  IGHV3-53*01  47   ................................................A.......AGC......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_10854  91   AGTGGGTCTCAGTTATTTACAGCGGTGGTACCACATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.7% (233/246)  IGHV3-53*01  137  ...................T..........G........A..................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  L  Y  Y  C  T  R  G  D  G  I  T  I  K  R  
                    Query_10854  181  ACACGCTGTATCTTCAAATGCACAGCCTGAGAGCCGACGACACGGCCCTGTACTACTGTACGAGAGGCGATGGAATTACTATCAAACGAA  270
V  94.7% (233/246)  IGHV3-53*01  227  ....................A................G.........G....T......G......------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  3    --------------------------------------------------------------------------........--------  10

                                      ---------------->                                  
                                      S  N  G  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10854  271  GCAATGGTTTTGATATATGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  321
J  93.8% (45/48)    IGHJ3*02     3    ---...C.........C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_158424

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     1e-124
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_10855  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  98.3% (284/289)  IGHV5-51*01  6    .............................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_10855  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_10855  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_10855  271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_10855  361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_158423

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_10856  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   .............................................G..G...........A...............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_10856  91   CTCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..G...............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G 
                    Query_10856  181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .........................G................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10856  271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_158420

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            424     8e-121
IGHD3-3*01                                                                                            19.9    0.18  
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGCCGGTCCTA	TTTTGGAGTG	ATACGAGAGCGGTGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGCCGGTCCTATTTTGGAGTGATACGAGAGCGGTGTTACTTTGACTAC	ARCRSYFGVIRERCYFDY	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	280	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_10857  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  96.9% (280/289)  IGHV1-2*04   6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  N  P  N  N  G  D  T  H  Y  A  L
                    Query_10857  91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGATGGATCAACCCTAACAATGGTGACACACATTATGCACT  180
V  96.9% (280/289)  IGHV1-2*04   96   ......................................T.............................G.....G....A.C.......A  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        E  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  K  S  D  D  T  A
                    Query_10857  181  GGAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAAATCTGACGACACGGC  270
V  96.9% (280/289)  IGHV1-2*04   186  .A........................................................................G...............  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  C  R  S  Y  F  G  V  I  R  E  R  C  Y  F  D  Y  W  G  Q  G  T  L  V  T
                    Query_10857  271  CGTGTATTACTGTGCGAGATGCCGGTCCTATTTTGGAGTGATACGAGAGCGGTGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCAC  360
V  96.9% (280/289)  IGHV1-2*04   276  ...................-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD3-3*01   11   ------------------------------..........--------------------------------------------------  20
J  100.0% (46/46)   IGHJ4*02     3    -------------------------------------------------------...................................  37

                                                 
                                        V  S  S  
                    Query_10857  361  CGTCTCCTCAG  371
J  100.0% (46/46)   IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_161672

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10858  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ......................................C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_10858  91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P 
                    Query_10858  181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC  270
V  90.6% (221/244)  IGHV4-59*01  229  ...........G...C....C...........T............G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  95.7% (44/46)    IGHJ5*02     6    ------------------------------------------------------------------------------............  17

                                                                        
                                       W  G  Q  G  A  L  V  S  V  S  S  
                    Query_10858  271  TGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  304
J  95.7% (44/46)    IGHJ5*02     18   ............A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_161673

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           341     6e-96
IGHD1-26*01                                                                                           14.1    9.3  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACGGGG	TAGTGGG	GCCGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGGGTAGTGGGGCCGGCTGGTTCGACCCC	ARGSGAGWFDP	292	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	10	78	69	66	3	0	95.7
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	43	8	0	84.3
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	98	16	0	86
CDR3-IMGT (germline)	292	293	2	2	0	0	100
Total	N/A	N/A	284	251	33	0	88.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  M  F  T  S  Y 
                    Query_10859  10   CAGCTGGTGCAGTCTGGGGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATGTTTACCAGTTAT  99
V  88.4% (251/284)  IGHV1-18*01  7    .................A.C.............................................T..........CC........C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  H  W  A  R  Q  A  P  G  Q  G  L  E  W  L  G  R  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_10859  100  GGTATACATTGGGCGCGACAGGCCCCTGGACAAGGCCTTGAGTGGCTGGGACGGATCAGCGGTTACAACGGGAACACAAACTATGCACAG  189
V  88.4% (251/284)  IGHV1-18*01  97   .....CAGC....T.....................G.........A.....T.........C......T..T..................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  D  R  V  I  L  T  I  D  T  S  T  T  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10859  190  AACCTGCAGGACAGAGTCATTCTGACCATAGACACGTCCACGACTACAGCCTACATGGAACTGAGGAGTCTCAGATCTGACGACACGGCC  279
V  88.4% (251/284)  IGHV1-18*01  187  ..G..C....G........CCA......C......A.......GC..............G........C..G..................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  F  C  A  R  G  S  G  A  G  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  T  
                    Query_10859  280  GTCTACTTCTGTGCACGGGGTAGTGGGGCCGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCACAG  358
V  88.4% (251/284)  IGHV1-18*01  277  ..G..T.A......-----------------------------------------------------------------  290
                                       V  Y  Y  C  A                                                                 
D  100.0% (7/7)     IGHD1-26*01  5    --------------------.......----------------------------------------------------  11
J  95.7% (45/47)    IGHJ5*02     5    --------------------------------...................................C.......T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_150638

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           297     7e-83
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTATTACGGTATGGACGTC	AREAYSYYGMDV	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	217	27	0	88.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  A  N  H  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_10860  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCGCTAATCACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  88.9% (217/244)  IGHV4-59*01  50   .....TCC...A..........................AG..G.T.........G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  I  S  H  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  T  A  D  K  S  K  N  
                    Query_10860  94   GGATTGCCTATATCTCTCACAGTGGGGGCACCAATTACAACCGCTCCCTCAAGAGTCGAGTCACCATAACAGCGGACAAGTCCAAGAACC  183
V  88.9% (217/244)  IGHV4-59*01  140  ......GG.......A.T........A.......C.......C.........................T...TA....C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D  
                    Query_10860  184  AGTTTTCCCTGAAGGTGAGATCTGTGACCGCCGCGGACACGGCCGTATATTATTGTGCCAGAGAGGCCTACTCTTATTACGGTATGGACG  273
V  88.9% (217/244)  IGHV4-59*01  230  ....C.........C....C...........T..............G.....C.....G.....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  89.7% (52/58)    IGHJ6*02     5    -------------------------------------------------------------------.....AC..C.............  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_10860  274  TCTGGGGCCAGGGGACTACGGTCATCGTCTCCTCA  308
J  89.7% (52/58)    IGHJ6*02     28   ..........A.....C.......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_150639

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           366     2e-103
IGHD1-1*01                                                                                            12.2    31    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTAC	AEEKRRVPRGTFHY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10861  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-23*01  47   ................................T.........G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  
                    Query_10861  91   AGTGGGTCTCAGCCATTAGTGGTGGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGA  180
V  96.8% (242/250)  IGHV3-23*01  137  .............T.........A......................................................G.........C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  
                    Query_10861  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGG  270
V  96.8% (242/250)  IGHV3-23*01  227  .................................................................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------------------------......------------  17

                                      ------------->                                  
                                      G  T  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10861  271  GAACCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (43/44)    IGHJ4*02     5    ----....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_161676

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           343     2e-96
IGHD1-26*01                                                                                           19.9    0.16 
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAATATTGTCA	TGGGAGCTAC	GCCG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAATATTGTCATGGGAGCTACGCCGTGATGTTTTTGATATC	ARGILSWELRRDVFDI	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  Y  T  F  S  G  F  S  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10862  1    GGTCCCTGAGACTCTCCTGTGCTGCCTCTGGATACACATTCAGTGGTTTTAGCATCAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (233/247)  IGHV3-21*01  47   ......................A..........T...C......A.C.A......G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  G  S  D  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_10862  91   AGTGGGTCTCATCCATTAGTGGTGGTAGTGATTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  94.3% (233/247)  IGHV3-21*01  137  ....................A..A.....AG........................................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  I  L  S  W  E  L  
                    Query_10862  181  AGAACTCACTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGGGGAATATTGTCATGGGAGCTAC  270
V  94.3% (233/247)  IGHV3-21*01  227  ..........G.........................................G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD1-26*01  8    --------------------------------------------------------------------------------..........  17

                                      T------------------>                                  
                                      R  R  D  V  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10862  271  GCCGTGATGTTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
J  98.0% (49/50)    IGHJ3*02     1    ----.....C............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_161677

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     3e-93
IGHD6-13*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATGGG	AGCAGCAGCTG	ATAAGGA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATGGGAGCAGCAGCTGATAAGGAAC	AREWEQQLIRN	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10863  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTGACTATAGCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   .....................................C......AG............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  S  G  S  R  Y  F  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  A  
                    Query_10863  91   AGTGGGTCTCGGGCATTAGTAGCGGTAGTCGCTACTTTTACTACGCAGACTCAGTGAAGGGCCGATTCTCCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ..........ATC.........TA.....A.T...A.A..............................A.....................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  E  W  E  Q  Q  L  I  
                    Query_10863  181  AGAACTCATTGTATTTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTGTATATTACTGTGCGAGAGAATGGGAGCAGCAGCTGATAA  270
V  92.4% (231/250)  IGHV3-21*01  227  ........C.....C.....................C...G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  7    ---------------------------------------------------------------------------...........----  17

                                      ---->                                  
                                      R  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10863  271  GGAACTGGGGCCAGGGAACCCTGGTCACCGTGTCCTCAG  309
J  97.2% (35/36)    IGHJ4*02     13   ---............................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_161674

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           367     5e-104
IGHD3-10*01                                                                                           10.3    116   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACGAGCGGTC	TCGGG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACGAGCGGTCTCGGGATTGACTAC	ARDTSGLGIDY	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	243	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_10864  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTTCTTACTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (243/251)  IGHV4-31*03  49   ................................................GG...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  R  S  G  S  T  Y  Y  N  P  S  L  K  S  R  I  T  I  S  I  D  T  S 
                    Query_10864  91   CTGGAGTGGATTGGGTACATCTATCGCAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAATTACCATATCAATAGACACGTCT  180
V  96.8% (243/251)  IGHV4-31*03  139  ........................TA........................................G...........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  S  G  L  G  I 
                    Query_10864  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGATACGAGCGGTCTCGGGATT  270
V  96.8% (243/251)  IGHV4-31*03  229  .....................................................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  14   ----------------------------------------------------------------------------------.....---  18
J  100.0% (42/42)   IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10864  271  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (42/42)   IGHJ4*02     9    ........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_161675

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD6-19*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTA	GGGTATAGTAGTGGCTGGTAC	TATGACAAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTAGGGTATAGTAGTGGCTGGTACTATGACAAATTTGACTAC	AKDVGYSSGWYYDKFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10865  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGGCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ...............................................T...C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  G  S  G  S  I  R  E  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10865  91   AGTGGGTCTCAAGTGTTAGTGGAAGTGGTAGTATCAGAGAATACGCAGAATCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  ...........GC.A.......T......G...G..C.T.C........C........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  V  G  Y  S  S  G  
                    Query_10865  181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTATTGTGCGAAAGATGTAGGGTATAGTAGTGGCT  270
V  94.0% (235/250)  IGHV3-23*01  227  ..............C.....................................A.....C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.2% (20/21)    IGHD6-19*01  1    --------------------------------------------------------------------------........C.......  16

                                      GT-------------------->                                  
                                      W  Y  Y  D  K  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10865  271  GGTACTATGACAAATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.2% (20/21)    IGHD6-19*01  17   .....----------------------------------------------------  21
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_150632

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           344     6e-97
IGHD4-17*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGTAGGG	ACGGTGACTAC	GGGGCGGGGCTTGAACAA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAGCGTAGGGACGGTGACTACGGGGCGGGGCTTGAACAA	VRERRDGDYGAGLEQ	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10866  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTAAGTTCCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-33*01  47   ........................................C...AG.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  W  Y  D  G  I  N  K  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  E  S  
                    Query_10866  91   AGTGGGTGTCAGTTATATGGTATGATGGAATTAATAAATACTATGCAGACGCCGTGAAGGGCCGATTCACCATCTCCAGAGACGAATCCA  180
V  94.0% (235/250)  IGHV3-33*01  137  ........G.....................G...................T................................A.T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  T  M  H  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  V  R  E  R  R  D  G  D  Y  
                    Query_10866  181  GGAACACGATGCATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGTGAGAGAGCGTAGGGACGGTGACTACG  270
V  94.0% (235/250)  IGHV3-33*01  227  A.......C..T......................................G.G..........C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD4-17*01  6    ------------------------------------------------------------------------------...........-  16

                                      ---------------->                                  
                                      G  A  G  L  E  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10866  271  GGGCGGGGCTTGAACAATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (34/34)   IGHJ4*02     15   -----------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_161678

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            391     6e-111
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	GRALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_10867  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.1% (270/290)  IGHV1-8*02   6    .............................................................................C.....C......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_10867  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.1% (270/290)  IGHV1-8*02   96   ........A.........................................................C.......................  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  A  A
                    Query_10867  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACGCGGC  270
V  93.1% (270/290)  IGHV1-8*02   186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G...A....  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  G  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10867  271  CGTATATTACTGTGGGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.1% (270/290)  IGHV1-8*02   276  ...G..........C.....---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01   9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_161679

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD3-3*01                                                                                            33.4    2e-05 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGGGGGGCCTT	CGATTTTTGGAGTGGTT	TCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGGGGGGCCTTCGATTTTTGGAGTGGTTTCCACTTTGACTCC	ARLGGAFDFWSGFHFDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  T  E  V  R  K  P  G  E  S  L  K  I  S  C  K  T  S  G  C  S  F  T  T  H
                    Query_10868  1    GCAGCTGGTGCAGTCTGGAACAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGACTTCTGGGTGCAGCTTTACCACCCA  90
V  93.1% (270/290)  IGHV5-51*01  6    ...................G.........A..................................GG......A.A...........G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  M  G  I  I  Y  P  G  V  S  D  T  R  Y  R  P
                    Query_10868  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACATGGGGATCATCTATCCTGGTGTCTCTGATACCAGATACAGACC  180
V  93.1% (270/290)  IGHV5-51*01  96   ........G...................................GG......................A..................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  R  S  L  K  A  P  D  T  A
                    Query_10868  181  GTCCTTCCAAGGCCAAGTCACCATCTCAGCCGACAAGTCCGTCAGTACCGCCTACCTGCAGTGGAGGAGCTTGAAGGCCCCGGACACCGC  270
V  93.1% (270/290)  IGHV5-51*01  186  ...............G........................A....C....................C...C........T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  L  G  G  A  F  D  F  W  S  G  F  H  F  D  S  W  G  Q  G  T  L  V  T  V
                    Query_10868  271  CATGTATTATTGTGCGAGACTAGGGGGGGCCTTCGATTTTTGGAGTGGTTTCCACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGT  360
V  93.1% (270/290)  IGHV5-51*01  276  .........C..........----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD3-3*01   7    ---------------------------------.................----------------------------------------  23
J  97.8% (44/45)    IGHJ4*02     4    -----------------------------------------------------.........A...........................  40

                                              
                                        S  S  
                    Query_10868  361  CTCCTCAG  368
J  97.8% (44/45)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_150634

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            366     2e-103
IGHD6-13*01                                                                                           21.8    0.039 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGAG	AGCAGCAGCTG	AA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGAGCAGCAGCTGAATGACTAC	ARDREQQLNDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  I  H  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10869  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGGGATCCATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-7*01   47   .........................................A.T.G.T.........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  T  Y  Y  V  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10869  91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGAGACATACTATGTGGACTCTTTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (242/250)  IGHV3-7*01   137  ....................C...............A................G....................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  E  Q  Q  L  N  
                    Query_10869  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGAGAGCAGCAGCTGAATG  270
V  96.8% (242/250)  IGHV3-7*01   227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  7    ---------------------------------------------------------------------------...........----  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10869  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (41/41)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_111384

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	274	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_10870  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  95.1% (274/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_10870  91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  95.1% (274/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_10870  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  95.1% (274/288)  IGHV5-51*01  186  ...............G.........................T.........................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10870  271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  95.1% (274/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_140527

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGGGCGGTAT	CTATGATAGTAATTTTTATTAC	GACTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGGGCGGTATCTATGATAGTAATTTTTATTACGACTTT	ARGGGIYDSNFYYDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	221	21	0	91.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  P  G  S  S  I  S  P  Y  Y  W  S  W  I  R  Q  T  P  G  K  E  L  D 
                    Query_10871  1    ACCCTGTCCCTCACCTGCAGTGTCCCTGGTAGTTCCATCAGTCCTTATTACTGGAGCTGGATCCGGCAGACCCCAGGGAAGGAACTGGAT  90
V  91.3% (221/242)  IGHV4-59*01  49   ...................C....T.....G.C.........AG...C.....................C............G......G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  A  L  K  S  R  V  S  L  S  V  D  T  S  K  H 
                    Query_10871  91   TGGATTGGATACATCTACTACACTGGGAGCACCAACTACAATCCCGCCCTCAAGAGTCGAGTCAGCCTATCAGTAGACACGTCCAAGCAC  180
V  91.3% (221/242)  IGHV4-59*01  139  ........G..T.....T....G..................C...T..................C.A....................A..  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  I  Y  D  S  N  F 
                    Query_10871  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGGGGGGGCGGTATCTATGATAGTAATTTT  270
V  91.3% (221/242)  IGHV4-59*01  229  ...................G...........................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  86.4% (19/22)    IGHD3-22*01  7    --------------------------------------------------------------------------...........G.GG.  22

                                      ----------->                                  
                                       Y  Y  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10871  271  TATTACGACTTTTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  316
D  86.4% (19/22)    IGHD3-22*01  23   ......----------------------------------------  28
J  97.1% (33/34)    IGHJ4*02     15   ------------............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_68014

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           285     4e-79
IGHD5-12*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	GATACAGTGG	GGCCCCATCTGAGGAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGTGGGGCCCCATCTGAGGAATTTGACTAC	ARYSGAPSEEFDY	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	24	15	6	3	62.5
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	243	4	4	0	0	100
Total	N/A	N/A	246	216	27	3	87.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  A  Y  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10872  1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCACCTTTGCCTACTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.8% (216/246)  IGHV3-23*01  47   .......................G.................AG.AG............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  T  S     D  G  H  T  F  H  A  D  P  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10872  91   AGTGGGTCTCAACTATTACTTCT---GATGGTCACACATTCCACGCGGACCCCGTAAAGGGCCGCTTCACCATCTCCAGAGACAATTCCA  177
V  87.8% (216/246)  IGHV3-23*01  137  ...........G......G.GG.AGT.G....AG.....A.T....A...T....G........G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  F  C  A  R  Y  S  G  A  P  S  E  
                    Query_10872  178  AGAATACTCTGTATCTCCAAATGAACAGCCTCAGAGCCGACGACACGGCCGTCTACTTCTGTGCGAGATACAGTGGGGCCCCATCTGAGG  267
V  87.8% (216/246)  IGHV3-23*01  227  ....C..G........G..............G........G...........A..T.A........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.0% (9/10)     IGHD5-12*01  4    ------------------------------------------------------------------....T.....--------------  13

                                      ---------->                                  
                                      E  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10872  268  AATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (43/43)   IGHJ4*02     6    --...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_68013

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           339     2e-95
IGHD3-3*01                                                                                            29.5    2e-04
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CATCGATCCCGGGG	ATTACGATTTCGGGAGTGGTT	T	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACATCGATCCCGGGGATTACGATTTCGGGAGTGGTTTCTACGGTTTGGACGTC	ARDIDPGDYDFGSGFYGLDV	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	131	27	21	3	3	77.8
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	253	237	13	3	93.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  V  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10873  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTACCTATGTCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.7% (237/253)  IGHV3-33*01  47   .............................................G.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><--------CDR2-IMGT--------><------------------------------------------------
                                      E  W  V  A  V  I  W  N  D  G  T  D  N  K  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  
                    Query_10873  91   AGTGGGTGGCAGTTATATGGAATGATGGAACTGATAATAAGAATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATT  180
V  93.7% (237/253)  IGHV3-33*01  137  ....................T.........---G......AT.C..............................................  223
                                      E  W  V  A  V  I  W  Y  D  G     S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  

                                      ----FR3-IMGT----------------------------------------------------><------------------------
                                      S  K  N  T  L  Y  L  Q  V  N  S  V  R  D  E  D  T  A  V  Y  Y  C  A  R  D  I  D  P  G  D  
                    Query_10873  181  CCAAGAACACGCTGTATTTGCAAGTGAACAGTGTGAGAGACGAGGACACGGCTGTCTATTACTGTGCGAGAGACATCGATCCCGGGGATT  270
V  93.7% (237/253)  IGHV3-33*01  224  .................C.....A.......CC......C...............G.................-----------------  296
                                      S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                    
D  90.5% (19/21)    IGHD3-3*01   3    ---------------------------------------------------------------------------------------...  5

                                      -CDR3-IMGT------------------------>                                 
                                      Y  D  F  G  S  G  F  Y  G  L  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_10873  271  ACGATTTCGGGAGTGGTTTCTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  338
D  90.5% (19/21)    IGHD3-3*01   6    .......TT.........--------------------------------------------------  23
J  95.9% (47/49)    IGHJ6*02     14   -------------------.......A..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_68012

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           330     1e-92
IGHD3-22*01                                                                                           16.1    2.6  
IGHJ3*01                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGATCCCTT	CTATGATA	CTACAGGAAGTTATTCCTTTGACCTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACATATGGATCCCTTCTATGATACTACAGGAAGTTATTCCTTTGACCTT	VRHMDPFYDTTGSYSFDL	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	92	22	0	80.7
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	251	40	0	86.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  V  S  G  Y  R  F  T  S  K
                    Query_10874  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGAGTCTCTGGATACAGGTTTACCAGCAA  90
V  86.3% (251/291)  IGHV5-51*01  6    ....................................C.........................AG.GT...........C.........T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  H  M  P  G  Q  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_10874  91   ATGGATCGCCTGGGTGCGCCACATGCCCGGACAGGGCCTGGAGTGGATGGGCGTCATCTATCCCGGAGACTCTGATACCAGATACAACCC  180
V  86.3% (251/291)  IGHV5-51*01  96   C.......G............G........GA.A.................GA..........T..T...................G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  R  I  S  I  S  A  D  E  S  T  N  T  A  S  L  H  W  G  F  L  R  A  S  D  T  A
                    Query_10874  181  GTCCTTCCAAGGCCGGATCAGCATTTCAGCCGACGAGTCCACCAACACTGCCTCTCTGCACTGGGGCTTCCTGCGGGCCTCGGACACTGC  270
V  86.3% (251/291)  IGHV5-51*01  186  ..............A.G...C...C.........A......T..G...C....AC.....G...A..AG....AA............C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        T  Y  Y  C  V  R  H  M  D  P  F  Y  D  T  T  G  S  Y  S  F  D  L  W  G  Q  G  T  M  V  T
                    Query_10874  271  CACATACTATTGTGTGAGACATATGGATCCCTTCTATGATACTACAGGAAGTTATTCCTTTGACCTTTGGGGCCAAGGGACAATGGTCAC  360
V  86.3% (251/291)  IGHV5-51*01  276  ..TG..T..C....C......---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-22*01  7    ---------------------------------........-------------------------------------------------  14
J  97.1% (33/34)    IGHJ3*01     17   -------------------------------------------------------------------.......................  39

                                                 
                                        V  S  S  
                    Query_10874  361  CGTCTCCTCAG  371
J  97.1% (33/34)    IGHJ3*01     40   ......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_68011

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD3-16*01                                                                                           10.3    114   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGAAAGA	GGGGG	CTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC	ARDQKEGAPDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	241	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10875  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (241/245)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10875  91   TGGATTGGGTATATCTTTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (241/245)  IGHV4-59*01  139  ................A.........................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  K  E  G  A  P  D  Y 
                    Query_10875  181  CAATTCTCCCTGAAACTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC  270
V  98.4% (241/245)  IGHV4-59*01  229  ..G...........G..................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   --------------------------------------------------------------------------.....-----------  22
J  100.0% (41/41)   IGHJ4*02     8    -----------------------------------------------------------------------------------.......  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10875  271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (41/41)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_140526

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           276     3e-76
IGHD7-27*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD7-27*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGACAAGGGG	ACTGGGGA	N/A	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAAGGGGACTGGGGATGGTACTTCGATCTC	ARRQGDWGWYFDL	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	60	33	26	4	3	78.8
FR2-IMGT	61	111	51	44	7	0	86.3
CDR2-IMGT	112	129	21	12	6	3	57.1
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	252	218	28	6	86.5


Alignments

                                      <--------FR1-IMGT---------><-----------CDR1-IMGT-----------><--------------------FR2-IMGT-
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  S  A  G  H  Y  W  S  W  I  R  Q  T  P  G  K 
                    Query_10876  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGCAGTGCTGGTCACTATTGGAGTTGGATCCGCCAGACCCCCGGAAAG  90
V  86.5% (218/252)  IGHV4-31*03  49   ...............................G............---..G....T....C.....C............CA...A..G...  135
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S     G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K 

                                      --------------------><-----CDR2-IMGT-----><-----------------------------------------------
                                       G  L  E  W  M  G  Y  I  F  Y  T  V     P  Y  Y  N  P  S  L  K  S  R  L  T  M  S  G  D  T 
                    Query_10876  91   GGCCTGGAGTGGATGGGTTACATCTTTTATACTGTGC---CATACTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCAGGAGACACC  177
V  86.5% (218/252)  IGHV4-31*03  136  ..............T..G.......A...C.G..G.AGCA.C..............C............G.T.....A....T......G  225
                                       G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T 

                                      -----FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT
                                       A  K  N  Q  F  S  L  R  L  T  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  R  Q  G  D  W  G 
                    Query_10876  178  GCTAAGAACCAGTTTTCCCTGAGGCTGACCTCTGTGACTTCCGCGGACACGGCCGTGTATTACTGTGCGAGACGACAAGGGGACTGGGGA  267
V  86.5% (218/252)  IGHV4-31*03  226  T.............C.......A.....G..........G................................------------------  297
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                   
D  100.0% (8/8)     IGHD7-27*01  4    ----------------------------------------------------------------------------------........  11

                                      -------------->                                  
                                       W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10876  268  TGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  316
J  100.0% (49/49)   IGHJ2*01     5    .................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_197256

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     2e-124
IGHD3-22*01                                                                                           23.8    0.012 
IGHJ3*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGCCA	A	TATGATAGTAGT	ACTTATAAGGGGGGGTTC	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCAATATGATAGTAGTACTTATAAGGGGGGGTTCGCTTTTGATATC	ASQYDSSTYKGGFAFDI	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	74	0	0	100
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	111	3	0	97.4
CDR3-IMGT (germline)	289	296	8	7	1	0	87.5
Total	N/A	N/A	295	287	8	0	97.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  F  T  
                    Query_10877  2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGGTTTACCA  91
V  97.3% (287/295)  IGHV5-51*01  2    ..................................................................................C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  
                    Query_10877  92   CCTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACA  181
V  97.3% (287/295)  IGHV5-51*01  92   G...........G........................................................G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  L  W  S  S  L  K  A  S  D  
                    Query_10877  182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCTGTGGAGCAGCCTGAAGGCCTCGGACC  271
V  97.3% (287/295)  IGHV5-51*01  182  ...............................................................A.........................A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      P  A  M  F  Y  C  A  S  Q  Y  D  S  S  T  Y  K  G  G  F  A  F  D  I  W  G  Q  G  T  M  V  
                    Query_10877  272  CCGCCATGTTTTACTGTGCGAGCCAATATGATAGTAGTACTTATAAGGGGGGGTTCGCTTTTGATATCTGGGGCCAAGGGACAATGGTCA  361
V  97.3% (287/295)  IGHV5-51*01  272  .........A............A..-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD3-22*01  8    --------------------------............----------------------------------------------------  19
J  100.0% (46/46)   IGHJ3*02     5    --------------------------------------------------------..................................  38

                                                  
                                      T  V  S  S  
                    Query_10877  362  CCGTCTCTTCAG  373
J  100.0% (46/46)   IGHJ3*02     39   ............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_118269

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           357     1e-100
IGHD6-25*01                                                                                           12.2    31    
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTTGGGCCC	GCGGCT	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTTGGGCCCGCGGCTGGTATGGACGTC	ARDVGPAAGMDV	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	113	1	0	99.1
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  V  S  M  R  S  G  G  Y  Y  W  S  W  I  R  Q  R  P  G  K  G  
                    Query_10878  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGTCTCCATGAGGAGTGGTGGATACTACTGGAGCTGGATCCGCCAGCGCCCAGGGAAGGGCC  93
V  95.6% (239/250)  IGHV4-31*01  50   .....TCC...A..................G......C..C........T.........................A..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  I  D  T  S  
                    Query_10878  94   TGGAGTGGATTGGGAACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAATAGACACGTCTA  183
V  95.6% (239/250)  IGHV4-31*01  140  ..............T..............................................................G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  V  G  P  A  A  G  
                    Query_10878  184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGTTGGGCCCGCGGCTGGTA  273
V  95.6% (239/250)  IGHV4-31*01  230  ......................................................................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD6-25*01  11   --------------------------------------------------------------------------------......----  16
J  100.0% (45/45)   IGHJ6*02     18   --------------------------------------------------------------------------------------....  21

                                      ------->                                 
                                      M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10878  274  TGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (45/45)   IGHJ6*02     22   .........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_140524

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	276	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_10879  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  96.5% (276/286)  IGHV5-51*01  6    ..................................................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_10879  91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  96.5% (276/286)  IGHV5-51*01  96   ......................A.......G.............G..........................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_10879  181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAGCACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  96.5% (276/286)  IGHV5-51*01  186  ....................C...................A...........................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10879  271  CGTGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.5% (276/286)  IGHV5-51*01  276  .A..............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_102665

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           332     4e-93
IGHD3-16*01                                                                                           12.2    34   
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GCCGCGAAAATCGGTCTTTGGACTACTTATCCC	TGGGGG	GGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCCGCGAAAATCGGTCTTTGGACTACTTATCCCTGGGGGGGGCGACTGGTTCGACCCC	ARGPRKSVFGLLIPGGGDWFDP	240	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  D  Y  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_10880  4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGGTCCTTCGATTACTATTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  93.4% (228/244)  IGHV4-34*01  50   .....TCC...A..........................AG.GGT..C...........................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  G  A  T  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_10880  94   GGATTGGGGAAATCAATCATGGTGCAACGACCAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  93.4% (228/244)  IGHV4-34*01  140  ....................A...G..GC............C................................................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------------CDR3-
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  K  S  V  F  G  L  
                    Query_10880  184  AGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGCCGCGAAAATCGGTCTTTGGACTAC  273
V  93.4% (228/244)  IGHV4-34*01  230  ...................C............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          

                                      IMGT--------------------------->                                  
                                      L  I  P  G  G  G  D  W  F  D  P  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_10880  274  TTATCCCTGGGGGGGGCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  339
D  100.0% (6/6)     IGHD3-16*01  17   -------......-----------------------------------------------------  22
J  97.9% (47/48)    IGHJ5*02     4    ------------------................................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_140523

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q 
                    Query_10881  1    ACCCTGTCCCTCACCTGCACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAA  90
V  91.0% (223/245)  IGHV4-59*01  49   ....................T..........................C........C............C.................G.G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_10881  91   TGGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAAC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A....G.....C...T....T....G......C..............C...........C.C.........A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E 
                    Query_10881  181  CAGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAG  270
V  91.0% (223/245)  IGHV4-59*01  229  ...T.........AG..G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  1    -----------------------------------------------------------------------------............-  12

                                      -------------->                                  
                                       D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10881  271  GATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  319
J  92.5% (37/40)    IGHJ4*02     9    ---------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_140522

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           388     5e-110
IGHD6-19*01                                                                                           18.0    0.65  
IGHJ5*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCG	AGCAGTGTCTGG	GACATAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGCAGTGTCTGGGACATATTGGTTCGACACC	ARDRAVSGTYWFDT	281	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	67	67	64	3	0	95.5
CDR1-IMGT	68	91	24	19	5	0	79.2
FR2-IMGT	92	142	51	49	2	0	96.1
CDR2-IMGT	143	166	24	22	2	0	91.7
FR3-IMGT	167	280	114	106	8	0	93
CDR3-IMGT (germline)	281	288	8	8	0	0	100
Total	N/A	N/A	288	268	20	0	93.1


Alignments

                                      <----------------------------FR1-IMGT-----------------------------><-------CDR1-IMGT------
                                        Q  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  R  G  T  F  S  A  F  G
                    Query_10882  1    GCAGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCTTCTCGAGGCACCTTCAGCGCCTTTGG  90
V  93.1% (268/288)  IGHV1-69*06  9    ..T............G.......................C...........................G..............AG..A..C  98
                                        L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y  A

                                      ><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-------------
                                        L  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  N  Y  A  Q  K
                    Query_10882  91   TCTCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGATCATCCCTATATTTGGTACAACAAACTACGCACAGAA  180
V  93.1% (268/288)  IGHV1-69*06  99   .A...............................G.............................C.........G................  188
                                        I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q  K

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        F  Q  D  R  V  T  I  T  A  D  K  S  T  S  T  V  Y  M  E  L  S  S  L  K  S  E  D  T  A  M
                    Query_10882  181  GTTCCAGGACAGAGTCACGATTACCGCGGACAAATCCACCAGCACAGTGTACATGGAGCTGAGCAGCCTCAAATCTGAGGACACGGCCAT  270
V  93.1% (268/288)  IGHV1-69*06  189  ........G..............................G.......CC....................G.G................G.  278
                                        F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A  V

                                      ---------><----------------CDR3-IMGT--------------->                                  
                                        Y  Y  C  A  R  D  R  A  V  S  G  T  Y  W  F  D  T  W  G  Q  G  T  L  V  I  A  S  S  
                    Query_10882  271  GTATTACTGCGCGAGAGATCGAGCAGTGTCTGGGACATATTGGTTCGACACCTGGGGCCAGGGAACCCTGGTCATCGCCTCCTCAG  356
V  93.1% (268/288)  IGHV1-69*06  279  .........T........--------------------------------------------------------------------  296
                                        Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------.......G....-----------------------------------------------------  18
J  93.5% (43/46)    IGHJ5*02     6    ----------------------------------------.........C........................C..T........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_116871

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           383     1e-108
IGHD7-27*01                                                                                           12.2    36    
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD7-27*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	CTGGGG	CCTCGGATTCCAATTTCCT	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGGGGCCTCGGATTCCAATTTCCTCTATTACTATGGAATGGACGTC	ATGASDSNFLYYYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	266	21	0	92.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  R  Y
                    Query_10883  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGGTA  90
V  92.7% (266/287)  IGHV1-69*01  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  G  I  I  T  A  F  G  T  T  E  Y  G  Q
                    Query_10883  91   TGCCATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCAGGGATCATCACTGCCTTTGGAACAACAGAGTACGGACA  180
V  92.7% (266/287)  IGHV1-69*01  96   ...T..............................................G..........C..AT......T...G..A.C....C...  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  A  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  E  D  P  A
                    Query_10883  181  GAAGTTCCAGGGCAGAGCGACGATTACCGCGGACGAATCAACGAGCACAGCCTATATGGAGCTGCGCAGTCTGAGATCTGAAGACCCGGC  270
V  92.7% (266/287)  IGHV1-69*01  186  .................TC....................C..............C.........A....C...........G...A....  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        A  Y  Y  C  A  T  G  A  S  D  S  N  F  L  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_10883  271  CGCGTATTACTGTGCGACTGGGGCCTCGGATTCCAATTTCCTCTATTACTATGGAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  92.7% (266/287)  IGHV1-69*01  276  ..T..............-------------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                           
D  100.0% (6/6)     IGHD7-27*01  5    -----------------......-------------------------------------------------------------------  10
J  94.5% (52/55)    IGHJ6*02     8    ------------------------------------------...C.....C..T...................................  55

                                             
                                        S  S 
                    Query_10883  361  CTCCTCA  367
J  94.5% (52/55)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_218398

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           405     3e-115
IGHD4-17*01                                                                                           19.9    0.17  
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGAGTC	CGGTGACTAC	GTGATGAGG	GACCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGAGTCCGGTGACTACGTGATGAGGGACCCC	ARGESGDYVMRDP	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  G  S  G  F  S  F  T  T  Y
                    Query_10884  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGGGTTCTGGATTCAGTTTTACCACCTA  90
V  94.8% (274/289)  IGHV5-51*03  6    ..............................................................A...........A...C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  G  K  G  L  E  R  M  G  I  I  Y  P  S  D  S  D  T  R  Y  S  P
                    Query_10884  91   CTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGCGGATGGGGATCATATATCCTAGTGACTCTGACACCAGATATAGTCC  180
V  94.8% (274/289)  IGHV5-51*03  96   .......................T...................T.............C......G..........T........C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  N  S  L  R  A  S  D  S  A
                    Query_10884  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAACAGCCTGAGGGCCTCGGACAGCGC  270
V  94.8% (274/289)  IGHV5-51*03  186  .................................................................G........A...........C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  G  E  S  G  D  Y  V  M  R  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10884  271  CATGTATTATTGTGCGAGAGGGGAGTCCGGTGACTACGTGATGAGGGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  94.8% (274/289)  IGHV5-51*03  276  .........C.........-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD4-17*01  7    ---------------------------..........-------------------------------------------------  16
J  100.0% (40/40)   IGHJ5*02     12   ----------------------------------------------........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_218399

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-9*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCGGTT	GTATTACGATATCTTG	CGGCGGGGAGG	CTACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGTTGTATTACGATATCTTGCGGCGGGGAGGCTACAACGGTTTGGACGTC	ARGRLYYDILRRGGYNGLDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  V  G  S  F  S  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10885  1    ACCCTGTCCCTCACCTGCGCTGTCTATGTTGGGTCCTTCAGTGATTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (233/245)  IGHV4-34*01  49   ............................G..............G..............................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  N  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10885  91   TGGATTGGCGAAATCAATCATAGTGGATCCAACAGCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  ........G..................AG..C..A.......................................A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  D  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  L  Y  Y  D  I  L  R 
                    Query_10885  181  CAGTTCTCCCTGAAGCTGGACTCCGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCCGGTTGTATTACGATATCTTGCGG  270
V  95.1% (233/245)  IGHV4-34*01  229  ..................AG...T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  93.8% (15/16)    IGHD3-9*01   1    -----------------------------------------------------------------------............T...---  16

                                      GT------------------------>                                 
                                       R  G  G  Y  N  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10885  271  CGGGGAGGCTACAACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
J  96.2% (50/52)    IGHJ6*02     11   --------....T.....A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_229946

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            335     4e-94
IGHD2-15*01                                                                                           25.7    0.003
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAGTTCACCA	TGTAGTGGTGGTA	CATGTTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAGTTCACCATGTAGTGGTGGTACATGTTATGATGCCTTCGACATC	ARDSSPCSGGTCYDAFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  S  N  S  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_10886  1    GGTCCCTGAGACTCTCCTGTGTAGCGTCTGGATTCTCGTTTAGTAATTCTTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-7*01   47   .....................C...C.........A.C.......GC.A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  R  K  D  E  T  A  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10886  91   AGTGGGTGGCCAACATAAGGAAAGATGAAACTGCGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.8% (232/250)  IGHV3-7*01   137  ..................A.C......G..G..A....T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  S  L  Q  M  N  S  L  T  A  E  D  T  A  I  Y  Y  C  A  R  D  S  S  P  C  S  G  
                    Query_10886  181  AGAACTCACTGTCTCTGCAAATGAACAGCCTGACAGCCGAGGACACGGCTATTTATTACTGTGCGAGAGACAGTTCACCATGTAGTGGTG  270
V  92.8% (232/250)  IGHV3-7*01   227  ............A....................G................G.G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD2-15*01  8    --------------------------------------------------------------------------------..........  17

                                      IMGT--------------------->                                  
                                      G  T  C  Y  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10886  271  GTACATGTTATGATGCCTTCGACATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  330
D  100.0% (13/13)   IGHD2-15*01  18   ...---------------------------------------------------------  20
J  94.0% (47/50)    IGHJ3*02     1    ----------......T..T..T.....................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_218396

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           277     9e-77
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCAA	AGGCTAG	ATTACTATAGTAGTAGTGG	GAACTATGTG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCAAAGGCTAGATTACTATAGTAGTAGTGGGAACTATGTG	VQRLDYYSSSGNYV	237	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	19	5	0	79.2
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	14	10	0	58.3
FR3-IMGT	123	236	114	107	7	0	93.9
CDR3-IMGT (germline)	237	242	6	4	2	0	66.7
Total	N/A	N/A	231	204	27	0	88.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  K  I  A  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I 
                    Query_10887  12   TGTGCAGCCTCTGGATTCACCTTCAGCAAAATTGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAACAATC  101
V  88.3% (204/231)  IGHV3-23*01  64   .......................T....GCTA........G...........................................G.T..T  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  D  M  T  I  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  M  L  Y  L 
                    Query_10887  102  AGTGATATGACTATTTCCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACATGCTCTACCTG  191
V  88.3% (204/231)  IGHV3-23*01  154  ....G..GTGG.GG.AG..............................G...............................C...G..T...  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><----------------CDR3-IMGT--------------->   
                                       Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  V  Q  R  L  D  Y  Y  S  S  S  G  N  Y  V  W 
                    Query_10887  192  CAGATGAACAGCCTTAGAGCCGAGGACACGGCCATATATTACTGTGTGCAAAGGCTAGATTACTATAGTAGTAGTGGGAACTATGTGTGG  281
V  88.3% (204/231)  IGHV3-23*01  244  ..A...........G..................G............C.A..---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  89.5% (17/19)    IGHD3-22*01  3    ----------------------------------------------------------........GA.........-------------  21
J  97.1% (33/34)    IGHJ4*02     15   ---------------------------------------------------------------------------------------...  17

                                                                     
                                       G  Q  G  T  L  V  T  V  A  S  
                    Query_10887  282  GGCCAGGGAACCCTGGTCACCGTCGCCTCAG  312
J  97.1% (33/34)    IGHJ4*02     18   ........................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_218397

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         333     1e-93
IGHD3-9*01                                                                                            18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	AGCAGAGGAA	TGACTGGTT	TGGGATCG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAAGCAGAGGAATGACTGGTTTGGGATCGTGGTTCGACCCC	ARSRGMTGLGSWFDP	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  W  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10888    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGGGGTTACTGGTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  92.8% (231/249)  IGHV4-30-4*01  49   ..................A............................T.A.....AC.................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  N  S  G  S  T  Y  Y  N  P  S  L  E  R  R  A  S  L  S  V  D  T  S 
                    Query_10888    91   CTGGAGTGGATTGGGTACATCTATAACAGTGGGAGCACCTACTACAACCCGTCCCTCGAGAGGCGAGCTTCCCTATCAGTCGACACGTCC  180
V  92.8% (231/249)  IGHV4-30-4*01  139  ........................T................................A....T....T.A..A.......A.........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         N  N  H  F  S  L  S  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  R  G  M  T  G  L 
                    Query_10888    181  AATAATCACTTCTCCCTGAGCCTGAGTTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAAGCAGAGGAATGACTGGTTTG  270
V  92.8% (231/249)  IGHV4-30-4*01  229  ..G..C..G..........AG.....C..........................................---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-9*01     15   -------------------------------------------------------------------------------.........--  23

                                        ----------------->                                  
                                         G  S  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10888    271  GGATCGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  100.0% (46/46)   IGHJ5*02       6    ------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_218393

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           304     9e-85
IGHD4-4*01                                                                                            19.9    0.15 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTTGT	ACCTACCA	TGACTACAGT	CTCCAGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCTACCATGACTACAGTCTCCAGTTCTACTTTCGCCAT	TYHDYSLQFYFRH	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	102	12	0	89.5
Total	N/A	N/A	242	218	24	0	90.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  P  F  S  D  Y  G  F  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10889  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCCCCTTCAGTGACTATGGCTTTCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  90.1% (218/242)  IGHV3-30*03  47   ................................T..A........AG.......A.G.............................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  V  S  Y  D  G  S  E  K  F  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_10889  91   AGTGGGTGGCAGTTGTCTCATATGATGGAAGTGAAAAGTTCTATGCAGACTCCGTGAAGGGCCGACTCACCATCTCCAGAGACAATTCCA  180
V  90.1% (218/242)  IGHV3-30*03  137  ..............A.A...............A.T..A.A.........................T........................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  V  Y  L  Q  M  S  R  L  R  A  E  D  S  A  V  Y  F  C  T  Y  H  D  Y  S  L  Q  F  
                    Query_10889  181  AGAACACTGTCTATCTGCAGATGAGCAGGCTGAGAGCTGAGGACTCGGCTGTCTATTTTTGTACCTACCATGACTACAGTCTCCAGTTCT  270
V  90.1% (218/242)  IGHV3-30*03  227  .......GC.G........A....A...C...............A.......G....AC...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (10/10)   IGHD4-4*01   1    ----------------------------------------------------------------------..........----------  10
J  89.4% (42/47)    IGHJ4*02     2    ----------------------------------------------------------------------------------------..  3

                                      ---------->                                  
                                      Y  F  R  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10889  271  ACTTTCGCCATTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  315
J  89.4% (42/47)    IGHJ4*02     4    .....GA.T.C...........A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_170958

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            299     2e-83
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCTCTCCTGGAAGTGACTGGGCGAGGG	GGGGGAGT	N/A	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCTCTCCTGGAAGTGACTGGGCGAGGGGGGGGAGTTGGTTCGACCCC	AASPGSDWARGGSWFDP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	51	0	0	100
CDR2-IMGT	108	128	21	17	4	0	81
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	218	27	0	89


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  G  S  I  G  I  T  Y  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_10890  1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCGGCATTACTTACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  89.0% (218/245)  IGHV4-4*02   47   ..A.....TCC...A..........................A...G..G.A.......................................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  A  Y  Y  S  G  S  N  N  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  K  A  
                    Query_10890  91   TGGAGTGGATTGGGGAAGCCTATTATAGTGGGAGCAACAACTACAACCCGTCCCTCAAAAGTCGAGTCGCCATATCAGTGGACAAGGCCA  180
V  89.0% (218/245)  IGHV4-4*02   137  .................AT....C............C.....................G.........A..........A......T...  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  E  F  S  L  R  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  A  S  P  G  S  D  W  A  
                    Query_10890  181  AGAACGAGTTTTCCCTGAGGTTAACGTCTATGACCGCCGCGGACACGGCCGTATATTATTGTGCGGCCTCTCCTGGAAGTGACTGGGCGA  270
V  89.0% (218/245)  IGHV4-4*02   227  .....C....C.......A.C.G.GC...G......................G.....C......-------------------------  291
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          

                                      GT-------------------->                                  
                                      R  G  G  S  W  F  D  P  W  G  Q  G  I  L  V  I  V  S  S  
                    Query_10890  271  GGGGGGGGAGTTGGTTCGACCCCTGGGGCCAGGGAATCCTGGTCATCGTCTCCTCAG  327
D  100.0% (8/8)     IGHD3-16*01  18   ---........----------------------------------------------  25
J  95.7% (44/46)    IGHJ5*02     6    -----------.........................C........C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_13257

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           388     4e-110
IGHD6-19*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATTA	GGGTATAGCACTGGCTGGTAC	GGGGTTGGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATTAGGGTATAGCACTGGCTGGTACGGGGTTGGGTAC	ARGLGYSTGWYGVGY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	249	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10891  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  99.6% (249/250)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10891  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTTGACACGTCT  180
V  99.6% (249/250)  IGHV4-31*03  139  ................................................................................A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  G  Y  S  T  G 
                    Query_10891  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGATTAGGGTATAGCACTGGC  270
V  99.6% (249/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.2% (20/21)    IGHD6-19*01  1    ---------------------------------------------------------------------------..........G....  15

                                      ----------------->                                  
                                       W  Y  G  V  G  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_10891  271  TGGTACGGGGTTGGGTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  322
D  95.2% (20/21)    IGHD6-19*01  16   ......----------------------------------------------  21
J  97.3% (36/37)    IGHJ4*02     12   ---------------........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_13256

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            344     6e-97
IGHD3-10*01                                                                                           10.3    125  
IGHJ3*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GAAT	TTATA	N/A	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGAATTTATAATGGTTTTGATGTC	ARGIYNGFDV	269	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	38	7	0	84.4
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	154	27	21	6	0	77.8
FR3-IMGT	155	268	114	105	9	0	92.1
CDR3-IMGT (germline)	269	275	7	7	0	0	100
Total	N/A	N/A	274	247	27	0	90.1


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  L  I  T  C  D  I  T  R  D  S  V  S  S  N  T  V  A  W  N  W  I  R 
                    Query_10892  2    CTGGTGAAACCCACACAGACCCTCTTAATCACCTGTGACATCACCAGGGACAGTGTCTCTAGTAACACTGTTGCTTGGAATTGGATCAGG  91
V  90.1% (247/274)  IGHV6-1*01   31   ........G...T.G..........C.C.........C....T..G................C....G..C.........C.........  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  R  S  D  Y  A  P  S  V  K  S  R 
                    Query_10892  92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATATTACAGATCCAAGTGGCGTTCTGACTATGCACCATCTGTGAAAAGTCGG  181
V  90.1% (247/274)  IGHV6-1*01   121  .........................................C.....G.........TA.AA...T......GT...............A  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  V  N  P  D  T  S  K  N  Q  F  S  L  H  L  N  S  V  T  P  E  D  T  A  I  Y  Y  C  A 
                    Query_10892  182  ATAACCGTCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTATTTATTATTGTGCA  271
V  90.1% (247/274)  IGHV6-1*01   211  ......A.....................................G..............................G.G.....C......  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------CDR3-IMGT--------->                                  
                                       R  G  I  Y  N  G  F  D  V  W  G  P  G  T  S  V  T  V  S  S  
                    Query_10892  272  AGAGGAATTTATAATGGTTTTGATGTCTGGGGCCCAGGGACATCGGTCACCGTCTCTTCAG  332
V  90.1% (247/274)  IGHV6-1*01   301  ....---------------------------------------------------------  304
                                       R                                                           
D  100.0% (5/5)     IGHD3-10*01  25   --------.....------------------------------------------------  29
J  91.7% (44/48)    IGHJ3*01     3    -------------...C.................A.......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_210566

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            330     1e-92
IGHD3-16*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCAGCCTGATCGGGACAG	TGCTTAT	N/A	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCAGCCTGATCGGGACAGTGCTTATTAC	ASQPDRDSAYY	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  I  S  G  V  S  F  S  R  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10893  1    ACCCTGTCCCTCACCTGCGCTATATCTGGTGTCTCCTTCAGTAGAAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  93.1% (228/245)  IGHV4-4*02   49   .....................G.C.......G....A....C..T.G.......................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  D  S  G  S  T  N  Y  N  E  S  L  K  S  R  V  T  I  S  I  D  K  S  K 
                    Query_10893  91   GAGTGGATTGGGGAAATCTCTGATAGTGGGAGCACCAACTACAACGAGTCTCTCAAGAGTCGAGTCACCATATCAATAGACAAGTCCAAG  180
V  93.1% (228/245)  IGHV4-4*02   139  ...................A.C.......................CC...C........................G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  H  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  Q  P  D  R  D  S  A  Y 
                    Query_10893  181  AACCAATTCTCCCTGCATCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGCCAGCCTGATCGGGACAGTGCTTAT  270
V  93.1% (228/245)  IGHV4-4*02   229  .....G.........A.G...............................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-16*01  28   -----------------------------------------------------------------------------------.......  34

                                      -->                                  
                                       Y  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_10893  271  TACTGGGGCCAGGGAACCCTGGCCACCGTCTCCTCAG  307
J  97.3% (36/37)    IGHJ4*02     12   ......................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_210565

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_10894  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_10894  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_10894  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_10894  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_210564

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           349     2e-98
IGHD2-21*01                                                                                           10.3    123  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TCTCCAAGGAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTCTCCAAGGAAGAGTCTACTACTTTGACTAC	ARSSLFLQGRVYYFDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_10895  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTTCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  95.1% (235/247)  IGHV4-31*02  50   .....TCC...A..................G..C......C.................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_10895  94   TGGAATGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCTA  183
V  95.1% (235/247)  IGHV4-31*02  140  ....G..........................................C......................C........A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  L  Q  G  
                    Query_10895  184  AGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTTCTCTATTTCTCCAAGGAA  273
V  95.1% (235/247)  IGHV4-31*02  230  .........................C.........................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  22   --------------------------------------------------------------------------.....-----------  26

                                      T------------------>                                  
                                      R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10895  274  GAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (48/48)   IGHJ4*02     1    ------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_210562

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD2-2*01                                                                                            14.1    8.6  
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGACAGATTGCC	GTAGTCCCCGGTGCTA	C	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGACAGATTGCCGTAGTCCCCGGTGCTACCTACGGTATGGACGTC	ARDRQIAVVPGATYGMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  S  S  S  Y  F  W  T  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_10896  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCAGCAGTAGTTACTTCTGGACTTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  90.6% (222/245)  IGHV4-59*01  49   .....................................T...........A.....GC.................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  D  G  S  G  S  P  R  Y  N  P  S  L  K  S  R  V  T  M  S  L  D  T  S  K  N 
                    Query_10896  91   TGGATTGGCTATGTCGATGGCAGTGGGAGTCCCAGGTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCGCTAGACACGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  ........G...A..T..TA.........CA...AC................................A..AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       R  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  Q  I  A  V  V  P  G 
                    Query_10896  181  CGATTCTCCCTGAGGCTGAATTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGACAGATTGCCGTAGTCCCCGGT  270
V  90.6% (222/245)  IGHV4-59*01  229  .AG..........A.....GC............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  81.2% (13/16)    IGHD2-2*01   12   ------------------------------------------------------------------------------.....A..A.C.  23

                                      -------------------->                                 
                                       A  T  Y  G  M  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_10896  271  GCTACCTACGGTATGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  324
D  81.2% (13/16)    IGHD2-2*01   24   ....--------------------------------------------------  27
J  98.0% (48/49)    IGHJ6*02     14   -----...............................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_210560

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*06                                                                                           325     3e-91
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*06	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	TCGGGG	TTCTCACACTAACCCCTTTTCG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGGGGTTCTCACACTAACCCCTTTTCGTAC	AKDRGSHTNPFSY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  N  F  S  N  Y  G  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10897  1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCAATTTCAGTAATTATGGCCTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-33*06  47   .......................G.G..........CC.......GC......A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  R  K  Y  Y  A  D  S  V  R  G  R  F  I  I  S  R  D  N  S  
                    Query_10897  91   AGTGGGTGGCAGTTATTTGGTATGATGGAAGTAGGAAATACTATGCAGACTCCGTGAGGGGCCGATTTATCATCTCCAGAGACAATTCTA  180
V  91.6% (229/250)  IGHV3-33*06  137  ................A................AT......................A.........C.C..................C.  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  V  Y  L  Q  M  N  S  L  G  G  E  D  T  A  M  Y  Y  C  A  K  D  R  G  S  H  T  N  
                    Query_10897  181  AGAATACAGTGTATCTACAAATGAACAGCCTGGGAGGCGAGGACACGGCTATGTATTACTGTGCGAAAGATCGGGGTTCTCACACTAACC  270
V  91.6% (229/250)  IGHV3-33*06  227  ....C..GC.......G...............A...C.............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD3-10*01  14   ----------------------------------------------------------------------......--------------  19

                                      ---------->                                  
                                      P  F  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10897  271  CCTTTTCGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (37/37)   IGHJ4*02     12   --------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_207093

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           371     7e-105
IGHD2-2*01                                                                                            14.1    8.8   
IGHJ6*02                                                                                              112     6e-29 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCGACGCCATC	CTATGCC	GAACTTGCGCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCGACGCCATCCTATGCCGAACTTGCGCCCTACTACTACTACGGTATGGACGTC	AKATPSYAELAPYYYYGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	242	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10898  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.0% (242/247)  IGHV3-30*18  47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  M  S  Y  D  G  S  D  K  Y  Y  A  D  S  V  K  G  R  F  T  I  P  R  D  N  S  
                    Query_10898  91   AGTGGGTGTCAGTTATGTCATATGATGGAAGTGATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCCCCAGAGACAATTCCA  180
V  98.0% (242/247)  IGHV3-30*18  137  ........G.......A...............A.........................................T...............  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  T  P  S  Y  A  E  
                    Query_10898  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAGGCGACGCCATCCTATGCCGAAC  270
V  98.0% (242/247)  IGHV3-30*18  227  ...................................................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-2*01   25   -------------------------------------------------------------------------------.......----  31

                                      R3-IMGT------------------------>                                 
                                      L  A  P  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10898  271  TTGCGCCCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
J  100.0% (58/58)   IGHJ6*02     5    -------..........................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_207092

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           341     5e-96
IGHD3-3*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATCGGGCCCCGGGG	TTTGGAGTGGT	CAGCCCCGC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCGGGCCCCGGGGTTTGGAGTGGTCAGCCCCGCTGACTAC	ARNRAPGFGVVSPADY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  S  F  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10899  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTAGTTTTGAAATGAACTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  94.0% (233/248)  IGHV3-48*03  47   ...................................A............A........................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  S  G  F  T  I  Y  Y  A  D  S  V  K  R  R  F  T  V  S  R  D  S  G  
                    Query_10899  91   AGTGGATTTCATACATTAGTAGTAGTGGTTTTACCATATACTACGCAGACTCTGTGAAGCGCCGATTCACCGTCTCCAGAGACAGCGGCA  180
V  94.0% (233/248)  IGHV3-48*03  137  .....G.......................AG............................G...........A............A..C..  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  I  N  S  L  T  V  E  D  T  A  V  Y  Y  C  A  R  N  R  A  P  G  F  G  
                    Query_10899  181  AGAACTCACTGTATCTGCAGATAAACAGCCTGACAGTCGAGGACACGGCTGTATATTACTGTGCGAGAAATCGGGCCCCGGGGTTTGGAG  270
V  94.0% (233/248)  IGHV3-48*03  227  ...................A..G..........G..C...............T...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-3*01   12   -----------------------------------------------------------------------------------.......  18

                                      T------------------>                                  
                                      V  V  S  P  A  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_10899  271  TGGTCAGCCCCGCTGACTACTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTCAG  324
D  100.0% (11/11)   IGHD3-3*01   19   ....--------------------------------------------------  22
J  97.6% (40/41)    IGHJ4*02     8    -------------....................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_278008

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_10900  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_10900  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_10900  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_10900  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_207090

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         319     2e-89
IGHD2-2*01                                                                                            35.3    4e-06
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*01	IGHJ6*02	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGGGGGAG	TATTGTAGTAGTACCAACTGC	ATG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGGGGGAGTATTGTAGTAGTACCAACTGCATGTACGGTCTGGACGTC	ARGGGVL**YQLHVRSGR	244	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  D  I  Y  S  W  N  W  I  R  Q  P  P  G  M  G 
                    Query_10901    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCTCCAGTGATATTTACTCCTGGAACTGGATCCGGCAGCCACCAGGGATGGGC  90
V  91.1% (226/248)  IGHV4-30-2*01  49   .......................................AG.....G.GG...........G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  V  G  H  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  R  S 
                    Query_10901    91   CTGGAGTGGGTTGGCCACATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCCAGAGTCGAGTCACCATCTCAGTTGACAGGTCC  180
V  91.1% (226/248)  IGHV4-30-2*01  139  .........A....GT..................G......................A................A.....A.........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  K  H  F  S  L  R  L  T  P  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  V  L  *  * 
                    Query_10901    181  AAGAAACACTTCTCGTTGAGGCTGACCCCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGGGGGGGGGGAGTATTGTAGTAG  270
V  91.1% (226/248)  IGHV4-30-2*01  229  .....C..G.....CC...A.....G.T.........................G..............----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  95.2% (20/21)    IGHD2-2*01     5    -------------------------------------------------------------------------------...........  15

                                        -IMGT---------------------->                                 
                                         Y  Q  L  H  V  R  S  G  R  L  G  P  R  D  H  G  H  R  L  L  
                    Query_10901    271  TACCAACTGCATGTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  331
D  95.2% (20/21)    IGHD2-2*01     16   .....G....---------------------------------------------------  25
J  97.9% (47/48)    IGHJ6*02       15   -------------......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_207096

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           252     3e-69
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGC	AACC	TCGGGGAG	GACTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACCTCGGGGAGGACTCCCTACTACTATTACGGAATGGACGTC	ATSGRTPYYYYGMDV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	23	4	0	85.2
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	12	9	0	57.1
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	239	2	2	0	0	100
Total	N/A	N/A	239	200	39	0	83.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  M  S  G  G  S  F  N  G  Y  S  W  T  W  V  R  Q  R  P  G  K  G  L  E 
                    Query_10902  1    ACCCTGTCCCTCACCTGCGCGATGTCTGGTGGGTCCTTCAATGGATATTCTTGGACCTGGGTCCGCCAGCGCCCCGGGAAGGGACTGGAG  90
V  83.7% (200/239)  IGHV4-34*01  49   ....................TG.C.A..............G...T..C.AC....G....A.........C...A........G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  S  H  F  K  T  V  N  Y  N  P  T  L  L  G  R  V  N  I  S  I  D  T  S  K  N 
                    Query_10902  91   TGGATTGCGGAAATCAGTCATTTTAAAACCGTTAATTACAACCCGACACTCTTGGGTCGAGTCAACATATCGATAGACACCTCCAAGAAC  180
V  83.7% (200/239)  IGHV4-34*01  139  .......G........A....AG.GG..G.ACC..C.........T.C...AA.A.........C......AG.......G.........  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  S  G  R  T  P  Y  Y  Y  Y 
                    Query_10902  181  CACTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGCGCAACCTCGGGGAGGACTCCCTACTACTATTAC  270
V  83.7% (200/239)  IGHV4-34*01  229  ..G..........A.....G...........................G........T..-------------------------------  287
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (8/8)     IGHD3-10*01  14   ---------------------------------------------------------------........-------------------  21
J  96.6% (56/58)    IGHJ6*02     5    -----------------------------------------------------------------------------.........C...  17

                                      ----------->                                 
                                       G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10902  271  GGAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  315
J  96.6% (56/58)    IGHJ6*02     18   ..T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_207095

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         402     3e-114
IGHD1-26*01                                                                                           16.1    2.5   
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GAGGGGCC	TAGTGGGA	CGAG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGCCTAGTGGGACGAGCTGGTTCGGCCCC	AREGPSGTSWFGP	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	76	72	70	2	0	97.2
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	106	8	0	93
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	291	274	17	0	94.2


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  N  F  I  D 
                    Query_10903    5    GTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGCTCTGGATACAATTTTATCGAC  94
V  94.2% (274/291)  IGHV5-10-1*01  4    ..G.................................................................T..........GC....C.AG.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  P  R  Y  S 
                    Query_10903    95   TACTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATCCCCGTTACAGC  184
V  94.2% (274/291)  IGHV5-10-1*01  94   ..........G...................................................................A..AAC......  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  Q  G  H  V  T  I  S  V  D  K  S  I  S  P  A  Y  L  R  W  S  G  L  K  A  S  D  T 
                    Query_10903    185  CCGTCCTTCCAAGGCCACGTCACCATCTCAGTTGACAAGTCCATCAGCCCTGCCTACCTACGGTGGAGCGGCCTGAAGGCCTCGGACACC  274
V  94.2% (274/291)  IGHV5-10-1*01  184  ...............................C................A..........G.A.......A....................  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><--------------CDR3-IMGT-------------->                                  
                                         A  M  Y  Y  C  A  R  E  G  P  S  G  T  S  W  F  G  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10903    275  GCCATGTATTACTGTGCGAGAGAGGGGCCTAGTGGGACGAGCTGGTTCGGCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  362
V  94.2% (274/291)  IGHV5-10-1*01  274  .....................-------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD1-26*01    5    -----------------------------........---------------------------------------------------  12
J  97.9% (46/47)    IGHJ5*02       5    -----------------------------------------........A......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_207094

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           416     2e-118
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	71	0	0	100
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  
                    Query_10904  8    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCT  97
V  95.9% (278/290)  IGHV5-51*03  5    ..............................................................................G...........  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  
                    Query_10904  98   ACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCC  187
V  95.9% (278/290)  IGHV5-51*03  95   .........G.......................A...................................A....G.....A.........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  
                    Query_10904  188  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCG  277
V  95.9% (278/290)  IGHV5-51*03  185  ..............................................C...........G...............A.....T.........  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------CDR3-IMGT----------------->                               
                                      A  V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_10904  278  CCGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  367
V  95.9% (278/290)  IGHV5-51*03  275  ..A.G...............----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (12/12)   IGHD6-19*01  5    -----------------------............-------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ---------------------------------------------.............................................  45

                                         
                                      S  
                    Query_10904  368  CAG  370
J  100.0% (48/48)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_278002

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD1-26*01                                                                                           12.2    31   
IGHJ3*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCTGT	TATAGT	AA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCTGTTATAGTAAATGCTTTTGATTTC	ARAKGIAVIVNAFDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_10905  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ..................A.....................G............................C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  V  S  V  D  M  S  N  N 
                    Query_10905  91   TGGATTGGATATATCTATTACAGAGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAGACATGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G..............T....G.....A......C.....CC................CA.A..........C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  K  G  I  A  V  I  V  N 
                    Query_10905  181  CGGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGTGCGAGAGCTAAGGGTATCGCTGTTATAGTAAAT  270
V  90.6% (221/244)  IGHV4-59*01  229  .A...........AG.................T.......CG.....G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------------......----  8
J  91.7% (44/48)    IGHJ3*01     3    ----------------------------------------------------------------------------------------..  4

                                      ----------->                                  
                                       A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_10905  271  GCTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  316
J  91.7% (44/48)    IGHJ3*01     5    .........G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_302057

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           367     6e-104
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTAGA	TCAGGA	TGTACTAATACCAGCTGCT	CTCCGGAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTAGATCAGGATGTACTAATACCAGCTGCTCTCCGGATCTACTTCTACGGTTTGGACGTC	AVDQDVLIPAALRIYFYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	243	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  V  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10906  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTGTTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  96.8% (243/251)  IGHV4-61*08  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  S  G  I  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10906  91   CTGGAGTGGATTGGGTATATCTATAACAGTGGGATCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  96.8% (243/251)  IGHV4-61*08  139  ........................T.........G.......................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       T  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  V  D  Q  D  V  L  I  P 
                    Query_10906  181  ACGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCTGTGTATTACTGTGCGGTAGATCAGGATGTACTAATACCA  270
V  96.8% (243/251)  IGHV4-61*08  229  .A.......................G........................C...............AG...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.5% (17/19)    IGHD2-2*01   8    -----------------------------------------------------------------------------....G..G.....  20

                                      CDR3-IMGT-------------------------->                                 
                                       A  A  L  R  I  Y  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10906  271  GCTGCTCTCCGGATCTACTTCTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  339
D  89.5% (17/19)    IGHD2-2*01   21   ......---------------------------------------------------------------  26
J  96.4% (53/55)    IGHJ6*02     8    --------------.....A.......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_278000

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           277     8e-77
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAG	N/A	N/A	GTCTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGGTCTTTTTGACGTC	TRGLFDV	249	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	134	30	23	7	0	76.7
FR3-IMGT	135	248	114	93	21	0	81.6
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	216	39	0	84.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  L  G  D  Y  A  M  S  W  V  R  Q  V  P  G  K  G  P  
                    Query_10907  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTTACACTTGGTGATTATGCTATGAGTTGGGTCCGCCAGGTTCCAGGGAAGGGGCCGG  90
V  84.7% (216/255)  IGHV3-49*04  47   .........................T........C..CT...................C.............C..............T..  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  I  A  F  I  R  S  N  G  Y  G  G  A  T  E  Y  A  A  S  V  K  G  R  F  E  V  S  R  D  
                    Query_10907  91   AGTGGATAGCCTTTATTCGAAGTAATGGCTATGGTGGGGCTACAGAATATGCCGCCTCTGTGAAAGGCAGATTCGAAGTCTCAAGAGATG  180
V  84.7% (216/255)  IGHV3-49*04  137  .....G...GT..C...A....C..A.CT.........A.A........C.....G..................ACCA............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----CDR3-IMGT-----> 
                                      D  H  N  S  L  V  Y  L  Q  L  N  S  L  K  I  E  D  T  A  I  Y  F  C  T  R  G  L  F  D  V  
                    Query_10907  181  ATCACAACAGCCTCGTCTACCTGCAACTGAATAGCCTGAAAATCGAAGACACTGCCATATATTTTTGTACTAGAGGTCTTTTTGACGTCT  270
V  84.7% (216/255)  IGHV3-49*04  227  ..TC...A...A...C...T......A....C..........C...G.....A...G.G....AC..........---------------  301
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
J  95.3% (41/43)    IGHJ4*02     6    --------------------------------------------------------------------------------......TA..  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10907  271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  95.3% (41/43)    IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_207098

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           255     3e-70
IGHD2-15*01                                                                                           10.3    119  
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	ACATAATCCT	GCTGC	CAGAGGGGC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGACATAATCCTGCTGCCAGAGGGGCCAACTGGTTCGACCTC	ARGHNPAARGANWFDL	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	48	24	19	2	3	79.2
FR2-IMGT	49	99	51	44	7	0	86.3
CDR2-IMGT	100	120	21	18	3	0	85.7
FR3-IMGT	121	234	114	94	20	0	82.5
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	245	206	36	3	84.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  D  F  Y  G  G  S  F     D  S  Y  W  N  W  T  R  Q  T  P  G  K  G  L  E 
                    Query_10908  1    ACCCTGTCCCTCACCTGCGATTTTTATGGTGGGTCCTT---TGATTCCTACTGGAATTGGACCCGCCAGACTCCAGGGAAGGGGCTGGAG  87
V  84.1% (206/245)  IGHV4-34*01  49   ...................C.G.C..............CAG..G..A........GC....T.......C.C..................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  N  R  A  G  S  T  N  F  N  P  S  L  E  S  R  L  T  I  S  V  D  T  S  T  K 
                    Query_10908  88   TGGATTGCAGAAATCAATCGTGCTGGAAGCACCAACTTCAATCCGTCCCTCGAGAGTCGACTCACCATTTCAGTGGACACGTCCACGAAG  177
V  84.1% (206/245)  IGHV4-34*01  139  .......GG..........A.AG..............A...C.........A........G.......A.....A..........A...C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       R  F  P  L  R  L  N  S  L  N  A  A  D  T  G  V  Y  Y  C  A  R  G  H  N  P  A  A  R  G  A 
                    Query_10908  178  CGATTCCCCCTGAGGCTAAATTCTCTTAACGCCGCAGACACGGGTGTGTATTACTGTGCGCGAGGACATAATCCTGCTGCCAGAGGGGCC  267
V  84.1% (206/245)  IGHV4-34*01  229  .AG...T......A...G.GC...G.G.C......G.......C................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (5/5)     IGHD2-15*01  21   ---------------------------------------------------------------------------.....----------  25
J  96.0% (48/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  D  L  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_10908  268  AACTGGTTCGACCTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  316
J  96.0% (48/50)    IGHJ5*02     3    .............C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_278006

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD3-10*01                                                                                           12.2    30    
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATAGGC	ATGGTT	GCGGAGGAG	TTGCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATAGGCATGGTTGCGGAGGAGTTGCCTAC	ARYRHGCGGVAY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	240	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10909  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.8% (240/243)  IGHV4-59*01  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  N  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10909  91   TGGATTGGGTATATCTACAACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (240/243)  IGHV4-59*01  139  .................TT.......................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  R  H  G  C  G  G  V  A 
                    Query_10909  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATATAGGCATGGTTGCGGAGGAGTTGCC  270
V  98.8% (240/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-10*01  9    ----------------------------------------------------------------------......--------------  14
J  92.9% (39/42)    IGHJ4*02     7    -------------------------------------------------------------------------------------...A.  11

                                      -->                                  
                                       Y  W  G  Q  G  P  L  V  P  V  S  S  
                    Query_10909  271  TACTGGGGCCAGGGACCCCTGGTCCCCGTCTCCTCAG  307
J  92.9% (39/42)    IGHJ4*02     12   ...............A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_278007

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           375     3e-106
IGHD6-25*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCTCGCCACAGAA	AGCAGCGGCTA	TAACTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCTCGCCACAGAAAGCAGCGGCTATAACTTACTACTTTGACTAC	ARVSPQKAAAITYYFDY	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	242	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  H  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10910  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACCACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.2% (242/244)  IGHV4-59*01  49   ................................................T.........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10910  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  99.2% (242/244)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  P  Q  K  A  A  A  I 
                    Query_10910  181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTCTCGCCACAGAAAGCAGCGGCTATA  270
V  99.2% (242/244)  IGHV4-59*01  229  ....................C...........................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (11/11)   IGHD6-25*01  7    -----------------------------------------------------------------------------...........--  17

                                      ----------------->                                  
                                       T  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10910  271  ACTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  100.0% (48/48)   IGHJ4*02     1    ----................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_278004

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           353     9e-100
IGHD5-18*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	114	0	0	100
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	242	234	8	0	96.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_10911  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAAT  93
V  96.7% (234/242)  IGHV4-59*01  50   .....TCC...A.........................................................................G..G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_10911  94   GGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  96.7% (234/242)  IGHV4-59*01  140  ........T.................................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y  
                    Query_10911  184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTACT  273
V  96.7% (234/242)  IGHV4-59*01  230  ..........................................................G...----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  90.0% (18/20)    IGHD5-18*01  1    ---------------------------------------------------------------..........C.....T...-------  20
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10911  274  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_278005

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD3-16*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_10912  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (227/249)  IGHV4-61*01  49   .......................C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S 
                    Query_10912  91   CTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  91.2% (227/249)  IGHV4-61*01  139  ....A.........GT............G......CAC..A.........................G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y 
                    Query_10912  181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTAT  270
V  91.2% (227/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------------.....  28

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_10912  271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
D  100.0% (7/7)     IGHD3-16*02  29   ..--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_13251

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           308     4e-86
IGHD3-9*01                                                                                            14.1    9.0  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACGG	TCGGAGATAACAAC	GACTGGT	ATCCCCGCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGTCGGAGATAACAACGACTGGTATCCCCGCCCTTGACGTC	ARSEITTTGIPALDV	267	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	50	45	41	4	0	91.1
CDR1-IMGT	51	80	30	25	5	0	83.3
FR2-IMGT	81	131	51	46	5	0	90.2
CDR2-IMGT	132	152	21	18	3	0	85.7
FR3-IMGT	153	266	114	96	18	0	84.2
CDR3-IMGT (germline)	267	272	6	6	0	0	100
Total	N/A	N/A	267	232	35	0	86.9


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  S  Q  T  L  T  L  T  C  N  F  S  G  F  S  V  T  S  A  G  M  C  V  S  W  I  R 
                    Query_10913  6    CTGGTGAAGCCCTCGCAGACCCTCACACTGACCTGCAACTTCTCTGGGTTCTCAGTCACCTCTGCTGGAATGTGTGTGTCCTGGATCCGT  95
V  86.9% (232/267)  IGHV2-70*01  31   ........A...A.A......................C................C...G.A..AG.............AG..........  120
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R 

                                      ------FR2-IMGT---------------------><-----CDR2-IMGT-----><--------------------------------
                                       Q  P  P  G  K  A  L  E  W  L  A  M  I  N  W  E  D  N  K  Y  Y  R  P  S  L  K  T  R  L  T 
                    Query_10913  96   CAACCCCCAGGGAAGGCCCTGGAGTGGCTTGCAATGATTAATTGGGAAGATAATAAATACTACAGGCCATCTCTGAAGACCAGGCTGACC  185
V  86.9% (232/267)  IGHV2-70*01  121  ..G..............................C.C...G.......T...G.............CA...................C...  210
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T 

                                      --------------------FR3-IMGT----------------------------------------------------><--------
                                       I  S  K  G  P  S  T  S  R  V  V  L  V  M  T  N  M  D  P  A  D  T  A  T  Y  Y  C  A  R  S 
                    Query_10913  186  ATCTCCAAGGGCCCGTCCACAAGCCGGGTGGTCCTAGTGATGACCAACATGGACCCTGCAGACACTGCCACTTACTACTGTGCACGGTCG  275
V  86.9% (232/267)  IGHV2-70*01  211  ..........A.A.C....A..A..A.........TACA...................TG.....A.....G..T............---  297
                                       I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R    

                                      ---------CDR3-IMGT----------------->                                  
                                       E  I  T  T  T  G  I  P  A  L  D  V  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_10913  276  GAGATAACAACGACTGGTATCCCCGCCCTTGACGTCTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  345
D  100.0% (7/7)     IGHD3-9*01   16   -----------.......----------------------------------------------------  22
J  92.9% (39/42)    IGHJ4*02     7    ----------------------------.....TA.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_124138

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     6e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_10914  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_10914  91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_10914  181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_10914  271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_124139

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD2-2*02                                                                                            12.2    32    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCA	CTGGTATAC	TTACGTCAGCGGGGGATATG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTGGTATACTTACGTCAGCGGGGGATATGTTGACTAC	ARGHWYTYVSGGYVDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10915  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGCCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................................................TT......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  T  A  Y  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S 
                    Query_10915  91   CTGGAGTGGATTGGGTGCATCTATTATAGTGGGACCGCCTACTACAACCCGTCCCTCAAGAGTCGAGCTACCATATCAGTAGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ................A.........C.......G.A..............................T......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  P  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  W  Y  T  Y  V 
                    Query_10915  181  AAGAACCAGTTCCCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCACTGGTATACTTACGTC  270
V  96.0% (240/250)  IGHV4-31*03  229  ............T.............C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (8/9)      IGHD2-2*02   22   --------------------------------------------------------------------------...C.....-------  30

                                      GT------------------>                                  
                                       S  G  G  Y  V  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_10915  271  AGCGGGGGATATGTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  325
J  97.6% (41/42)    IGHJ4*02     7    -------------.............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_124136

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD2-21*01                                                                                           18.0    0.60 
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CAGTTTCTGTCTTAGTTTGGACCGGGGAGT	TTGTGGTGG	N/A	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGGGGAGTTTGTGGTGGTTTTGATATG	ARGSFCLSLDRGVCGGFDM	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  N  G  G  S  L  N  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10916  1    ACCCTGTCCCTCACCTGCGCCGTCAATGGTGGGTCCCTCAATGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAG  90
V  92.2% (226/245)  IGHV4-34*01  49   ....................T...T...........T...G..G.......................................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  Q  S  G  T  T  N  Y  K  P  S  L  K  S  R  V  I  T  S  V  D  T  S  K  N 
                    Query_10916  91   TGGATTGGGGAAATCAATCAAAGTGGCACCACCAACTACAAGCCGTCCCTCAAGAGTCGAGTAATCACATCGGTGGACACGTCCAAGAAT  180
V  92.2% (226/245)  IGHV4-34*01  139  ....................T.....A.G............C....................C.C..T...A..A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  F  C  L  S  L  D  R 
                    Query_10916  181  CAGTTCTCCTTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCAGTTTCTGTCTTAGTTTGGACCGG  270
V  92.2% (226/245)  IGHV4-34*01  229  .........C.....C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      ----------------------->                               
                                       G  V  C  G  G  F  D  M  W  G  Q  G  T  M  V  T  V  S  
                    Query_10916  271  GGAGTTTGTGGTGGTTTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTT  325
D  100.0% (9/9)     IGHD2-21*01  7    -----.........-----------------------------------------  15
J  97.6% (40/41)    IGHJ3*02     7    --------------.........C...............................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_124137

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           406     1e-115
IGHD2-2*01                                                                                            18.0    0.65  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGGGAG	GTACCAGCT	CCTCAACCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGGAGGTACCAGCTCCTCAACCCTGACTAC	ARGGRYQLLNPDY	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	294	277	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N  
                    Query_10917  2    AGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACGTTCAACA  91
V  94.2% (277/294)  IGHV1-69*12  2    .............G........G...........................................................C....G..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  T  V  F  G  T  T  N  Y  
                    Query_10917  92   ACTATGCTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCATCATCACTGTCTTTGGAACAACAAACTACG  181
V  94.2% (277/294)  IGHV1-69*12  92   G............C............................................G......C..A.......T...G.........  181
                                      S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  A  Y  M  E  L  S  S  L  R  S  E  D  
                    Query_10917  182  CACAGAAGTTCCAGGGCAGAGTCACCATTACCGCGGACGAATCGACGAGGACAGCCTACATGGAGCTGAGTAGCCTAAGATCTGAGGACA  271
V  94.2% (277/294)  IGHV1-69*12  182  .........................G.................C.....C....................C.....G.............  271
                                      A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  A  V  Y  Y  C  A  R  G  G  R  Y  Q  L  L  N  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10917  272  CGGCCGTTTATTACTGTGCGAGAGGCGGGAGGTACCAGCTCCTCAACCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  361
V  94.2% (277/294)  IGHV1-69*12  272  .......G................------------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                    
D  100.0% (9/9)     IGHD2-2*01   15   -------------------------------.........--------------------------------------------------  23
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_124134

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           288     5e-80
IGHD2-15*01                                                                                           16.1    2.3  
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	GGATATCGTAATGG	GACCCTCTGCCACACTGGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGATATCGTAATGGGACCCTCTGCCACACTGGGGCTTTTGATTTC	ARDGYRNGTLCHTGAFDF	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  D  S  G  F  T  F  S  N  F  S  M  S  W  V  R  Q  S  P  G  K  G  L  
                    Query_10918  1    GGTCCCTGAGACTCTCCTGTACAGACTCTGGATTCACCTTTAGCAACTTTTCCATGAGTTGGGTCCGGCAGTCTCCAGGAAAGGGACTGG  90
V  86.8% (217/250)  IGHV3-23*01  47   ....................G...C....................G..A.G.......C........C...G.......G.....G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  A  S  G  R  R  P  Y  Y  A  D  S  A  K  G  R  F  S  V  L  R  D  N  S  
                    Query_10918  91   AGTGGGTTTCAAGTATCACTGCTAGCGGTCGTCGTCCATACTACGCAGACTCCGCGAAGGGCCGATTCTCCGTTCTCAGAGACAATTCCA  180
V  86.8% (217/250)  IGHV3-23*01  137  .......C...GC...T.G..G...T...G..A.CA..................T.........G...A..A.CTC..............  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  G  Y  R  N  G  T  
                    Query_10918  181  AGAACACTCTTTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTCTATTACTGTGCGAGAGACGGATATCGTAATGGGACCC  270
V  86.8% (217/250)  IGHV3-23*01  227  .......G..G.........................C...............A.............A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  85.7% (12/14)    IGHD2-15*01  2    -----------------------------------------------------------------------......T...G...-----  15

                                      IMGT--------------------->                                  
                                      L  C  H  T  G  A  F  D  F  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_10918  271  TCTGCCACACTGGGGCTTTTGATTTCTGGGGCCAAGGGACAGTGGTCACCGTCTCCTCAG  330
J  93.5% (43/46)    IGHJ3*01     5    --------------.........G.................A.............T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_13250

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           338     5e-95
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	230	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_10919  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.3% (230/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10919  91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCC  180
V  94.3% (230/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C.................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_10919  181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  94.3% (230/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10919  271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_124132

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           343     2e-96
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGAGTTCCAAGATGGGCAAATC	TTGTAGTAGTCCCAGCTGCT	CTCG	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGAGTTCCAAGATGGGCAAATCTTGTAGTAGTCCCAGCTGCTCTCGCTAT	AKGSSKMGKSCSSPSCSRY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  T  Y  G  M  H  W  F  R  Q  A  P  G  K  G  L  
                    Query_10920  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCGGGATTCACCTTAAGTACCTATGGCATGCACTGGTTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-30*18  47   ............................T...........C....G................G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  E  S  T  K  K  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  T  S  
                    Query_10920  91   AGTGGGTGGCAGTTATATCATATGATGAAAGTACTAAAAAATATGCAGACTCCGTGAAGGGCCGATTCAGCATCTCCAGGGACACTTCCA  180
V  94.0% (234/249)  IGHV3-30*18  137  ...........................G.....A....T.C............................C.........A....A.....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  S  S  K  M  G  K  
                    Query_10920  181  AGAACACGCTGTATCTGCAGATGAACGGCCTGAGAGCTGAAGACACGGCTGTCTATTACTGTGCGAAAGGGAGTTCCAAGATGGGCAAAT  270
V  94.0% (234/249)  IGHV3-30*18  227  ...................A......A.............G...........G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      S  C  S  S  P  S  C  S  R  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10920  271  CTTGTAGTAGTCCCAGCTGCTCTCGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  333
D  95.0% (19/20)    IGHD2-2*01   7    -..........A.........------------------------------------------  26
J  94.7% (36/38)    IGHJ4*02     11   -------------------------...C.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_124130

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           420     7e-120
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ3*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AGGGG	AGTGGGAGC	CCCTTCTTAGAGGCA	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAAGGGGAGTGGGAGCCCCTTCTTAGAGGCACTTTTGATATC	AKEGEWEPLLRGTFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  S  A  V  K  V  A  C  K  A  S  G  G  T  F  S  N  Y
                    Query_10921  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGTCCGCGGTGAAAGTCGCCTGCAAGGCTTCTGGAGGCACCTTCAGCAACTA  90
V  96.2% (280/291)  IGHV1-69*01  6    ..................G..........A.............T.......G...T..............................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  F  F  G  T  A  N  Y  A  Q
                    Query_10921  91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTTTCTTTGGTACAGCAAACTACGCACA  180
V  96.2% (280/291)  IGHV1-69*01  96   ....................................................G...........A.........................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  L  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_10921  181  GAGGTTGCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  96.2% (280/291)  IGHV1-69*01  186  ..A...C...................................................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  K  E  G  E  W  E  P  L  L  R  G  T  F  D  I  W  G  Q  G  T  M  V  I  V  S
                    Query_10921  271  CGTGTATTACTGTGCGAAAGAAGGGGAGTGGGAGCCCCTTCTTAGAGGCACTTTTGATATCTGGGGCCAAGGGACAATGGTCATCGTCTC  360
V  96.2% (280/291)  IGHV1-69*01  276  .................G...---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (9/9)     IGHD1-26*01  6    --------------------------.........-------------------------------------------------------  14
J  97.8% (44/45)    IGHJ3*02     6    --------------------------------------------------.................................C......  45

                                           
                                        S  
                    Query_10921  361  TTCAG  365
J  97.8% (44/45)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_124131

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     9e-100
IGHD3-22*01                                                                                           14.1    8.3   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGGCAAAATAGTT	TGATAGT	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGGCAAAATAGTTTGATAGTCTTTGACTCT	ARGGQNSLIVFDS	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  N  S  G  G  S  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_10922  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAATAGTGGTGGTTCCTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.2% (238/250)  IGHV4-31*03  49   ..................A............G........GC..........A........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S 
                    Query_10922  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTTTCCATATCAATAGACACGTCT  180
V  95.2% (238/250)  IGHV4-31*03  139  ..........................................................A..........A........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  D  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  Q  N  S  L  I 
                    Query_10922  181  AAGAACCAGTTCTCCCTGGACCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTATTGTGCGAGAGGAGGGCAAAATAGTTTGATA  270
V  95.2% (238/250)  IGHV4-31*03  229  ..................A.G......................................C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-22*01  10   -------------------------------------------------------------------------------------.....  14

                                      ----------->                                  
                                       V  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10922  271  GTCTTTGACTCTTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  316
D  100.0% (7/7)     IGHD3-22*01  15   ..--------------------------------------------  16
J  93.2% (41/44)    IGHJ4*02     5    --........AC............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_256947

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            316     2e-88
IGHD6-19*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATCGAACAT	CAGTGGGTGG	AATACACGCTT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATCGAACATCAGTGGGTGGAATACACGCTTTGGACGTC	ARYRTSVGGIHALDV	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	102	12	0	89.5
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	224	22	0	91.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  T  N  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_10923  1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGCCTCCATCAGCAGTACTAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.1% (224/246)  IGHV4-4*02   49   .......................C.......G..............G...........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  Y  H  S  G  N  A  N  L  N  P  S  L  R  S  R  L  S  I  S  V  D  K  S  K 
                    Query_10923  91   GAGTGGATTGGAGAAGTATATCATAGTGGGAATGCCAACCTCAACCCGTCCCTCAGGAGTCGTCTTAGCATCTCAGTAGACAAGTCCAAG  180
V  91.1% (224/246)  IGHV4-4*02   139  ...........G...A.C.............GCA.....TA..............A......AG.C.C...A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  R  T  S  V  G  G  I 
                    Query_10923  181  AACCAATTCTCCCTGAAGCTGAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGCGAGATATCGAACATCAGTGGGTGGAATA  270
V  91.1% (224/246)  IGHV4-4*02   229  .....G.................C..........................G.....C.........------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  90.0% (9/10)     IGHD6-19*01  9    ----------------------------------------------------------------------------......C...----  18

                                      -------------->                                 
                                       H  A  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10923  271  CACGCTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  100.0% (41/41)   IGHJ6*02     22   -------.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_22029

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*05                                                                                           307     1e-85
IGHD6-19*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*05	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCCACGGGCTC	AGCAGTGGC	GATGACTCTGTTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCCACGGGCTCAGCAGTGGCGATGACTCTGTTTATGACTAC	VVHGLSSGDDSVYDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	220	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  T  Y  Y  R  G  W  I  R  Q  A  P  G  K  G 
                    Query_10924  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTACTTACTACAGGGGCTGGATCCGCCAGGCCCCAGGGAAGGGG  90
V  90.2% (220/244)  IGHV4-61*05  49   .................................................G.......T.............G...C.............A  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  V  F  H  S  G  S  A  K  Y  N  P  S  L  Q  S  R  L  T  M  S  L  D  K  S 
                    Query_10924  91   CTGGAGTGGATTGGGGAAGTTTTTCACAGTGGGAGCGCCAAGTACAACCCGTCCCTTCAGAGTCGACTCACCATGTCACTAGACAAGTCT  180
V  90.2% (220/244)  IGHV4-61*05  139  ...............T.TA.C.A.T...........A....C........C.....CA........G.......A...G..........C  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  Q  F  S  L  K  L  Q  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  H  G  L  S  S  G  D 
                    Query_10924  181  AGGAACCAGTTCTCCCTGAAGCTGCAGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGTGGTCCACGGGCTCAGCAGTGGCGAT  270
V  90.2% (220/244)  IGHV4-61*05  229  .A......................AGC.....................................--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (9/9)     IGHD6-19*01  7    ------------------------------------------------------------------------------.........---  15

                                      ----------------->                                  
                                       D  S  V  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10924  271  GACTCTGTTTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  100.0% (41/41)   IGHJ4*02     8    -----------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_256944

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           335     4e-94
IGHD2-21*01                                                                                           25.7    0.003
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-21*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCGCGCAAAC	TGTGGTGGTGAGTGCT	TCGCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGCGCAAACTGTGGTGGTGAGTGCTTCGCATTTGATGTC	ARRANCGGECFAFDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	16	8	0	66.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	251	37	0	87.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  Q  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  I  F  K  N  T
                    Query_10925  1    GCAGCTGGTGCAGTCTGGAGCTCAGGTGAAGAAGCCTGGGTCGTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGACATCTTCAAAAACAC  90
V  87.2% (251/288)  IGHV1-69*06  6    ..................G...G...................C.......................T.......G..C.....GC.G.TA  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  N  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  G  I  S  P  L  F  G  T  A  T  Y  P  Q
                    Query_10925  91   TGTTATCAACTGGGTGCGACAGGCCCCCGGACAGGGGCCTGAGTGGATGGGAGGGATCAGCCCTCTCTTTGGCACAGCTACTTATCCACA  180
V  87.2% (251/288)  IGHV1-69*06  96   ..C.....G..................T.....A....T....................T....A.......T.....A.AC..CG....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  I  I  T  A  D  K  S  T  S  T  D  Y  L  E  L  S  T  L  R  S  E  D  T  A
                    Query_10925  181  GAAGTTTCAGGACAGAGTCATCATTACCGCGGACAAATCCACGAGCACAGACTACTTGGAGCTGAGTACACTGAGATCTGAAGACACGGC  270
V  87.2% (251/288)  IGHV1-69*06  186  ......C....G........CG............................C....A..........C.GC...........G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  A  N  C  G  G  E  C  F  A  F  D  V  W  G  Q  G  T  T  V  I  V  T  S
                    Query_10925  271  CGTCTACTATTGTGCGAGGCGCGCAAACTGTGGTGGTGAGTGCTTCGCATTTGATGTCTGGGGCCAAGGGACAACGGTCATCGTCACTTC  360
V  87.2% (251/288)  IGHV1-69*06  276  ...G..T..C........------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  93.8% (15/16)    IGHD2-21*01  8    ----------------------------...........T....----------------------------------------------  23
J  93.0% (40/43)    IGHJ3*01     8    -------------------------------------------------.........................T.....C....T....  48

                                        
                                        
                    Query_10925  361  AG  362
J  93.0% (40/43)    IGHJ3*01     49   ..  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_256942

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         388     4e-110
IGHJ3*02                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ATGGGCGCAGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGCGCAGATGATGCTTTTGATATC	ARMGADDAFDI	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	248	0	0	100


Alignments

                                         <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                            S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                     Query_10926    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  100.0% (248/248)  IGHV3-30-3*01  47   ..........................................................................................  136
                                            S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                         -------------><-------CDR2-IMGT------><---------------------------------------------------
                                         E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                     Query_10926    91   AGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  100.0% (248/248)  IGHV3-30-3*01  137  ..........................................................................................  226
                                         E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                         -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                         K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  M  G  A  D  D  A  F  
                     Query_10926    181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAATGGGCGCAGATGATGCTTTTG  270
V  100.0% (248/248)  IGHV3-30-3*01  227  ....................................................................----------------------  294
                                         K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (50/50)    IGHJ3*02       1    -------------------------------------------------------------------------------...........  11

                                         ---->                                  
                                         D  I  W  G  Q  G  T  M  V  T  V  S  S  
                     Query_10926    271  ATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  309
J  100.0% (50/50)    IGHJ3*02       12   .......................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_256941

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            382     3e-108
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10927  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_10927  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  98.8% (247/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_10927  181  AGAACTCACTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  98.8% (247/250)  IGHV3-7*01   227  ..............C.......................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10927  271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_256940

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           338     4e-95
IGHD3-22*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	AATTCC	GATGGTAGTGGCTAT	CCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAAATTCCGATGGTAGTGGCTATCCCCTTGACTAC	ARNSDGSGYPLDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10928  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTTACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.5% (232/248)  IGHV3-33*01  47   ..................................C..........G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  A  V  I  W  N  G  G  S  N  K  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10928  91   CGTGGGTGGCAGTTATATGGAATGGTGGAAGTAATAAATACTATGCAGAGTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.5% (232/248)  IGHV3-33*01  137  A...................T...A........................C........................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  I  L  Y  L  Q  T  N  R  L  G  A  E  D  T  A  I  Y  Y  C  A  R  N  S  D  G  S  G  Y  
                    Query_10928  181  AGAACATTCTGTATCTGCAAACGAATCGACTGGGAGCCGAGGACACGGCTATTTATTACTGTGCGCGAAATTCCGATGGTAGTGGCTATC  270
V  93.5% (232/248)  IGHV3-33*01  227  ......CG.............T...CA.C...A.................G.G............A..----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD3-22*01  11   --------------------------------------------------------------------------...A.......T...-  25

                                      ---------->                                  
                                      P  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10928  271  CCCTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ4*02     7    ---.....................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_22020

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           400     9e-114
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TTTCCAAGGCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTCCAAGGCGACTACTCGGACTTC	ARDFQGDYSDF	289	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	104	10	0	91.2
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	276	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  T  C  K  A  S  G  Y  P  F  S 
                    Query_10929  1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCACCTGCAAGGCTTCTGGTTACCCCTTTAGC  90
V  93.2% (276/296)  IGHV1-18*04  1    .....T......................................................T....................A......C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  G  I  S  W  V  R  Q  A  P  G  H  G  L  E  W  L  G  W  I  S  G  H  N  G  N  T  K  N 
                    Query_10929  91   ACCTACGGTATCAGCTGGGTGCGACAGGCCCCTGGACACGGGCTTGAGTGGCTGGGATGGATCAGCGGTCACAATGGCAACACAAAAAAT  180
V  93.2% (276/296)  IGHV1-18*04  91   .G....................................A............A...............C.T.......T........CT..  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  D  R  V  T  M  T  T  D  T  S  T  T  T  A  Y  M  E  L  R  S  L  S  S  D  D 
                    Query_10929  181  GCACAGAAGTTCCAGGACAGAGTCACCATGACCACAGACACATCCACGACCACAGCGTACATGGAGCTGAGGAGCCTGAGTTCTGACGAC  270
V  93.2% (276/296)  IGHV1-18*04  181  .........C......G................................G......C.......................A.........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------CDR3-IMGT----------->                                  
                                       T  A  V  Y  Y  C  A  R  D  F  Q  G  D  Y  S  D  F  W  G  Q  G  T  R  V  S  V  S  S  
                    Query_10929  271  ACTGCCGTATATTATTGTGCGAGAGATTTCCAAGGCGACTACTCGGACTTCTGGGGCCAGGGAACCCGGGTCTCCGTCTCCTCAG  355
V  93.2% (276/296)  IGHV1-18*04  271  ..G.....G.....C...........-----------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                              
J  89.6% (43/48)    IGHJ4*02     1    -------------------------------------......TT....A.................T....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_22022

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           316     2e-88
IGHD3-10*01                                                                                           10.3    115  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGA	CTTCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGACTTCAGGCCTTTGACTCC	ARGGLQAFDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  G  G  F  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_10930  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAACAGTGGTGGATTCTACTGGACTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  90.4% (226/250)  IGHV4-31*03  49   .......................C................G.........T.A........GC...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  Y  T  G  H  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  L  D  T  S 
                    Query_10930  91   CTAGAGTGGATTGGTTACATCTTTTACACTGGACACACCTACTACAATCCGTCCCTCAGGAGTCGACTTACCATTTCACTGGACACATCT  180
V  90.4% (226/250)  IGHV4-31*03  139  ..G...........G.......A.....G...GAG............C..........A.......G.......A...G.A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       E  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  L  Q  A  F  D 
                    Query_10930  181  GAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGGGGACTTCAGGCCTTTGAC  270
V  90.4% (226/250)  IGHV4-31*03  229  A...................G.....C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------.....---------------  20
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10930  271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.7% (43/44)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_22024

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           319     2e-89
IGHD3-16*01                                                                                           35.3    4e-06
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCG	TATGATTACGTTTGGGGG	GCCTACCGGTGGCACAAGGCC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCGTATGATTACGTTTGGGGGGCCTACCGGTGGCACAAGGCCTTTGATATC	ARDSYDYVWGAYRWHKAFDI	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  D  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10931  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTCAGTGATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-48*03  47   ....................................CC......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  G  S  F  T  T  M  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_10931  91   AGTGGCTTTCATACATTAGTGGTAGTTTCACTACCATGTTTTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  90.8% (227/250)  IGHV3-48*03  137  .....G..............A.....GGT.G......A.AC.............................................G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  K  T  L  F  L  E  M  N  N  L  T  V  E  D  T  A  V  Y  F  C  A  R  D  S  Y  D  Y  V  W  
                    Query_10931  181  AGAAAACGCTGTTTCTGGAAATGAACAACCTGACAGTCGAGGACACGGCTGTTTATTTCTGTGCGAGAGATTCGTATGATTACGTTTGGG  270
V  90.8% (227/250)  IGHV3-48*03  227  ....CT.A....A....C.........G.....G..C....................A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-16*01  5    --------------------------------------------------------------------------................  20

                                      R3-IMGT------------------------>                                  
                                      G  A  Y  R  W  H  K  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10931  271  GGGCCTACCGGTGGCACAAGGCCTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
D  100.0% (18/18)   IGHD3-16*01  21   ..----------------------------------------------------------------  22
J  100.0% (43/43)   IGHJ3*02     8    -----------------------...........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_22026

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           341     5e-96
IGHD4-17*01                                                                                           12.2    32   
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGAAGAAAG	TACGGT	CA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATGGGAAGAAAGTACGGTCAGATGCTTTTGATATA	VRDGKKVRSDAFDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  G  S  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10932  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTGGTTCCTGGATGCACTGGGTCCGCCAAGCTCCTGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-74*01  47   ...................................A........A.C.A...........................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  G  D  G  S  G  T  N  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10932  91   TGTGGGTCTCACGTATTAATGGTGATGGGAGTGGCACAAACTACGCGGAATCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCC  180
V  93.6% (234/250)  IGHV3-74*01  137  ....................A...........A......G.........C.......................................A  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      Q  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  R  D  G  K  K  V  R  S  
                    Query_10932  181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGATGACACGGCTGTATACTACTGTGTCAGAGATGGGAAGAAAGTACGGTCAG  270
V  93.6% (234/250)  IGHV3-74*01  227  .......G................................G...........G..T.......CA.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD4-17*01  5    ---------------------------------------------------------------------------------......---  10
J  97.9% (46/47)    IGHJ3*02     2    -----------------------------------------------------------------------------------------.  2

                                      ------------->                                
                                      D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S
                    Query_10932  271  ATGCTTTTGATATATGGGGCCAAGGGACAATGGTCACCGTCTCTTC  316
J  97.9% (46/47)    IGHJ3*02     3    .............C................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_256948

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           352     3e-99
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	AATCAC	GTATCACTATGATAATAATGGTTAT	AAG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATCACGTATCACTATGATAATAATGGTTATAAGTACTTTGACTAC	ARGITYHYDNNGYKYFDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	235	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_10933  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAA  90
V  95.9% (235/245)  IGHV4-34*01  49   ........................................................C...A............................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  I  N  H  G  G  D  S  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10933  91   TGGCTTGGGGAAATCAATCATGGTGGAGACTCTAAGTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.9% (235/245)  IGHV4-34*01  139  ...A.................A.....AG.A.C..C......................................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  I  T  Y  H  Y  D  N  N 
                    Query_10933  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGAATCACGTATCACTATGATAATAAT  270
V  95.9% (235/245)  IGHV4-34*01  229  .................................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  88.0% (22/25)    IGHD3-22*01  1    -----------------------------------------------------------------------....T.........G..G.  19

                                      -------------------->                                  
                                       G  Y  K  Y  F  D  Y  W  S  Q  G  T  L  V  T  V  S  S  
                    Query_10933  271  GGTTATAAGTACTTTGACTACTGGAGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  88.0% (22/25)    IGHD3-22*01  20   ......-------------------------------------------------  25
J  97.8% (45/46)    IGHJ4*02     3    ---------...............G..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_164253

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           378     3e-107
IGHD3-3*01                                                                                            12.2    32    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCACA	TATGCGCATGAGGTCATG	ACGATT	G	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACATATGCGCATGAGGTCATGACGATTGTTGACTAC	TTYAHEVMTIVDY	249	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	254	6	6	0	0	100
Total	N/A	N/A	254	248	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  V  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_10934  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGTCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.6% (248/254)  IGHV3-15*01  47   .......T........................................C.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  E  T  D  G  G  T  T  D  Y  V  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_10934  91   AGTGGGTTGGCCGTATTAAAAGCGAAACTGATGGTGGGACAACAGACTACGTTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  97.6% (248/254)  IGHV3-15*01  137  .......................A...........................C......................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      D  S  R  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  Y  A  H  E  V  
                    Query_10934  181  ACTCAAGAAACACGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACATATGCGCATGAGGTCA  270
V  97.6% (248/254)  IGHV3-15*01  227  .T....A...................................................................----------------  300
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 

                                      GT-------------->                                  
                                      M  T  I  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10934  271  TGACGATTGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (6/6)     IGHD3-3*01   6    --......-------------------------------------------  11
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_166541

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            279     3e-77
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	13	8	0	61.9
FR3-IMGT	127	240	114	98	16	0	86
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	212	34	0	86.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10935  1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  86.2% (212/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  G  G  P  F  N  Y  A  P  A  L  E  S  R  V  I  I  S  V  D  K  S  K 
                    Query_10935  91   GAATGGATTGGGGAGATCCATCATGGCGGACCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCATCATCTCAGTAGACAAGTCCAAG  180
V  86.2% (212/246)  IGHV4-4*01   139  ..G...........A...T.....A.T..GAG.AC.......AAC...T.....A............C...A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_10935  181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  86.2% (212/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_10935  271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_318822

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           336     1e-94
IGHD1-7*01                                                                                            12.2    31   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	TCGGGGGGGGG	GGAACT	CGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGATCGGGGGGGGGGGAACTCGGGGACTACTTTGACTAC	ARSGGGELGDYFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	245	230	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  R  L  
                    Query_10936  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGAGGCTGG  90
V  93.9% (230/245)  IGHV3-53*01  47   ...................................................................................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  S  I  F  S  N  G  N  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_10936  91   AGTGGGTCTCAAGCATTTTTAGTAATGGTAACACATACTACACAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.9% (230/245)  IGHV3-53*01  137  ...........GTT....A...CGG.....G..........G................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  V  Y  L  Q  V  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  G  G  G  E  L  G  D  
                    Query_10936  181  ACACGGTGTATCTTCAGGTGCACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCAAGATCGGGGGGGGGGGAACTCGGGGACT  270
V  93.9% (230/245)  IGHV3-53*01  227  .....C..........AA..A........................................G...-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (6/6)     IGHD1-7*01   10   ----------------------------------------------------------------------------......--------  15
J  95.8% (46/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  F  D  Y  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_10936  271  ACTTTGACTACTGGGGCCAGGGATCCCTGGTCATCGTCTCCTCAG  315
J  95.8% (46/48)    IGHJ4*02     4    .......................A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_160983

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           305     3e-85
IGHD6-13*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTGG	GCAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTGGGCAGCAGCTGACTGACTAC	REILGSS*LTT	275	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	29	28	0	1	96.6
CDR1-IMGT	29	52	24	23	1	0	95.8
FR2-IMGT	53	103	51	51	0	0	100
CDR2-IMGT	104	127	24	22	2	0	91.7
FR3-IMGT	128	274	147	111	3	33	75.5
CDR3-IMGT (germline)	275	282	8	8	0	0	100
Total	N/A	N/A	283	243	6	34	85.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L   P  V  Q  P  L  D  S  P  S  V  V  I  A  *  T  G  S  A  R  L  Q  G  R  G  W 
                    Query_10937  1    GGTCCCTGAGACT-TCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  89
V  85.9% (243/283)  IGHV3-21*01  47   .............C................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       S  G  S  H  P  L  V  V  V  V  V  T  Y  I  T  Q  T  Q  *  R  A  D  S  P  I  T  Q  T  Q  * 
                    Query_10937  90   AGTGGGTCTCATCCATTAGTGGTAGTAGTAGTCACATATATTACGCAGACTCAGTGAAGGGCCGATTCACCTATTACGCAGACTCAGTGA  179
V  85.9% (243/283)  IGHV3-21*01  137  ....................A...........T.......C...---------------------------------.............  193
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y                                   A  D  S  V  

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                       R  A  D  S  P  S  P  E  T  T  P  R  T  H  C  I  C  K  *  T  A  *  E  P  R  T  R  L  S  I 
                    Query_10937  180  AGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATT  269
V  85.9% (243/283)  IGHV3-21*01  194  ..........................A..........................................................G....  283
                                      K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-----------CDR3-IMGT----------->                                  
                                       T  V  R  E  I  L  G  S  S  *  L  T  T  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_10937  270  ACTGTGCGAGAGATTCTGGGCAGCAGCTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  341
V  85.9% (243/283)  IGHV3-21*01  284  .............-----------------------------------------------------------  296
                                      Y  C  A  R                                                              
D  100.0% (10/10)   IGHD6-13*01  8    -------------------..........-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_97951

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  L  R  Q  A  P  G  K  G  P  
                    Query_10938  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGCTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...G........................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_10938  91   AGTGGGTCTCAGCGATTACTGGGAGTGGTAGTAGCACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  .............T....G...T......G..............G......................................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_10938  181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  93.6% (234/250)  IGHV3-23*01  227  ...............................G....................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10938  271  ATTCACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_160981

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           324     8e-91
IGHD6-19*01                                                                                           21.8    0.040
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	C	ATAGAAGTGGCTGG	CCGTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACATAGAAGTGGCTGGCCGTTTGATGCTTTCGAGATC	ARHRSGWPFDAFEI	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  A  S  V  W  S  D  S  S  F  W  T  W  I  R  Q  A  P  G  K  G 
                    Query_10939  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGCGTCCGTCTGGAGTGACAGTTCCTTCTGGACCTGGATTCGGCAGGCCCCAGGGAAGGGA  90
V  91.6% (228/249)  IGHV4-61*01  49   ...................C...........GC......A.C....GT....A..A.....G......C......C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  I  Y  N  P  S  L  E  S  R  V  T  I  S  A  D  T  S 
                    Query_10939  91   CTGGAGTGGATTGGCTATATCTATTACAGTGGGAGCACCATCTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGCAGACACGTCC  180
V  91.6% (228/249)  IGHV4-61*01  139  ..............G.........................A................A.....................T..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  K  Q  F  S  L  K  L  S  A  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  R  S  G  W  P  F 
                    Query_10939  181  AAGAAGCAGTTCTCCCTGAAGCTGAGCGCTGTAACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGACATAGAAGTGGCTGGCCGTTT  270
V  91.6% (228/249)  IGHV4-61*01  229  .....C.....................T....G....................G............A..---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD6-19*01  5    ----------------------------------------------------------------------....C.........------  18
J  88.0% (44/50)    IGHJ3*02     1    -----------------------------------------------------------------------------------------.  1

                                      -------------->                                  
                                       D  A  F  E  I  W  G  Q  G  I  K  V  S  V  S  S  
                    Query_10939  271  GATGCTTTCGAGATCTGGGGCCAGGGGATAAAGGTCTCCGTCTCTTCAG  319
J  88.0% (44/50)    IGHJ3*02     2    ........T..T...........A....C..T....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_37151

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           308     4e-86
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCTCAG	AGTAGTACCAACTGTTATG	GGCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCAGAGTAGTACCAACTGTTATGGGCTTCTACTACTACGGTATGGACGTC	ARGLRVVPTVMGFYYYGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	242	117	109	5	3	93.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	247	224	20	3	90.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  Y  G  G  S  F  S  T  Y  Y  W  T  W  I  R  Q  T  P  G  K  G  L  E  
                    Query_10940  4    CCCTGAGACTCTCCTGCACTGTCTATGGTGGGTCCTTCAGCACTTACTACTGGACCTGGATCCGCCAGACCCCAGGGAAGGGGCTGGAGT  93
V  90.7% (224/247)  IGHV4-34*01  50   .....TCC...A.....G......................TGG...........G.............C.....................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><-----------------------------------------------------FR3-
                                      W  I  G  E  I  Y  V  G  G  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  
                    Query_10940  94   GGATTGGGGAAATCTATGTTGGTGGAGGCACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAGA  183
V  90.7% (224/247)  IGHV4-34*01  140  ..............A..CA.A.....A.....---...................................A...................  226
                                      W  I  G  E  I  N  H  S  G  S  T     N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                      IMGT------------------------------------------------------><-------------------------CDR3-
                                      N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  G  L  R  V  V  P  T  V  
                    Query_10940  184  ACCAGTTCTCCCTGAACCTGAGCTCTGTGACCGCCGCGGACACGGCTATGTACTACTGCGCGAGAGGCCTCAGAGTAGTACCAACTGTTA  273
V  90.7% (224/247)  IGHV4-34*01  227  ................G..............................G....T.....T........-----------------------  293
                                      N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                       
D  89.5% (17/19)    IGHD2-2*01   11   -------------------------------------------------------------------------..........G...C..  27

                                      IMGT------------------------>                                 
                                      M  G  F  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  P  V  S  S 
                    Query_10940  274  TGGGCTTCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCCCCGTCTCCTCA  335
D  89.5% (17/19)    IGHD2-2*01   28   ..------------------------------------------------------------  29
J  98.2% (54/55)    IGHJ6*02     8    -------...........................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_97954

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           400     9e-114
IGHD3-3*01                                                                                            46.8    1e-09 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGCAGCCCTCCGGAG	ACGATTTTTGGAGTGGTTATTATA	GGTTTGG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGCAGCCCTCCGGAGACGATTTTTGGAGTGGTTATTATAGGTTTGGTGACTAT	ARLQPSGDDFWSGYYRFGDY	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	272	16	0	94.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  Y 
                    Query_10941  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCGACTAT  91
V  94.4% (272/288)  IGHV1-18*01  7    ....................................................................................AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  V  Y  S  D  T  T  N  H  A  Q 
                    Query_10941  92   GGGATCAACTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGCTGGATCAGCGTTTACAGTGATACCACAAACCATGCACAG  181
V  94.4% (272/288)  IGHV1-18*01  97   ..T....G...........................G..............A..........C.....A..G..A.......T........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  N  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  P 
                    Query_10941  182  AAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAACACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGCCC  271
V  94.4% (272/288)  IGHV1-18*01  187  ...........................................G................C..........................G..  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------CDR3-IMGT------------------------>                  
                                       I  Y  Y  C  A  R  L  Q  P  S  G  D  D  F  W  S  G  Y  Y  R  F  G  D  Y  W  G  Q  G  T  L 
                    Query_10941  272  ATATATTACTGTGCGAGACTGCAGCCCTCCGGAGACGATTTTTGGAGTGGTTATTATAGGTTTGGTGACTATTGGGGCCAGGGAACCCTG  361
V  94.4% (272/288)  IGHV1-18*01  277  G.G...............------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (24/24)   IGHD3-3*01   6    ----------------------------------........................--------------------------------  29
J  97.6% (40/41)    IGHJ4*02     8    -----------------------------------------------------------------......C..................  32

                                                      
                                       V  T  V  S  S  
                    Query_10941  362  GTCACCGTCTCCTCAG  377
J  97.6% (40/41)    IGHJ4*02     33   ................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_97955

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-10*01                                                                                           37.2    9e-07 
IGHJ3*02                                                                                              56.4    3e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCATCT	CTATGGTTCGGGGAGTTAT	GC	TGATA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCATCTCTATGGTTCGGGGAGTTATGCTGATATG	ARGHLYGSGSYADM	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  I  V  S  G  V  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10942  1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ...................C...........G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  R  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_10942  91   CTGGAGTGGATTAGGTACATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTTCCATATCTGTAGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ............G.............C..........................................A.......A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  L  Y  G  S  G 
                    Query_10942  181  AAGAATCAGTTCTCCCTGAAGCTGAGTTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCATCTCTATGGTTCGGGG  270
V  96.4% (241/250)  IGHV4-31*03  229  .....C....................C...............................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (19/19)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      -------------->                                  
                                       S  Y  A  D  M  W  G  R  G  T  M  G  T  V  S  S  
                    Query_10942  271  AGTTATGCTGATATGTGGGGCCGCGGGACAATGGGCACCGTCTCTTCAG  319
D  100.0% (19/19)   IGHD3-10*01  20   ......-------------------------------------------  25
J  90.2% (37/41)    IGHJ3*02     10   --------......C.......AA..........T..............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_160985

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            442     2e-126
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	287	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_10943  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  98.6% (287/291)  IGHV1-2*04   6    ..................G.............AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_10943  91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.6% (287/291)  IGHV1-2*04   96   ..........................................................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_10943  181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  98.6% (287/291)  IGHV1-2*04   186  ..........................................................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W  G  Q
                    Query_10943  271  CGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGGGGCCA  360
V  98.6% (287/291)  IGHV1-2*04   276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------------------....A...........................  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_10943  361  AGGGACCACGGTCACCGTCTCCTCA  385
J  98.2% (56/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_37155

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           413     2e-117
IGHD1-20*01                                                                                           29.5    2e-04 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-20*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGAAAA	TATAACTGGAACGAC	GGAAT	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATC	ARVGKYNWNDGIAFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N  S  F
                    Query_10944  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAACAGCTT  90
V  95.5% (277/290)  IGHV1-69*01  6    ..................G.......................C........................................G.....A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  N  W  V  R  Q  A  P  G  H  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  K  Y  A  Q
                    Query_10944  91   TGCTGTCAACTGGGTGCGACAGGCCCCTGGACATGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAACAAAATACGCACA  180
V  95.5% (277/290)  IGHV1-69*01  96   ....A...G........................A..........................................G....C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_10944  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGGACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.5% (277/290)  IGHV1-69*01  186  .............................................C....C.......................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  V  G  K  Y  N  W  N  D  G  I  A  F  D  I  W  G  Q  G  T  I  V  T  V  S
                    Query_10944  271  CGTTTATTATTGTGCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATCTGGGGCCAAGGGACAATAGTCACCGTCTC  360
V  95.5% (277/290)  IGHV1-69*01  276  ...G.....C..........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (15/15)   IGHD1-20*01  3    ----------------------------...............-----------------------------------------------  17
J  95.7% (45/47)    IGHJ3*02     4    ------------------------------------------------...T..........................G...........  45

                                           
                                        S  
                    Query_10944  361  TTCAG  365
J  95.7% (45/47)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_97958

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           297     8e-83
IGHD2-21*01                                                                                           19.9    0.17 
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCAATTC	TTGTGTTGGTGAT	GCCTGCGCTC	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATCCCAATTCTTGTGTTGGTGATGCCTGCGCTCACTATTACTTCTCCGGCATGGACGTC	TRDPNSCVGDACAHYYFSGMDV	249	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	22	8	0	73.3
FR3-IMGT	135	248	114	100	14	0	87.7
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	223	33	0	87.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  R  F  V  A  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10945  1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCAACTTTCGTTTCGTTGCTATCAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.1% (223/256)  IGHV3-49*04  47   .........................T..........C....G..GATTA......G.G................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  T  T  P  F  G  G  T  A  E  Y  A  A  S  V  K  D  R  F  T  M  S  R  D  
                    Query_10945  91   AGTGGGTTGGTTTCATTAGAACCACACCCTTCGGTGGGACAGCTGAATACGCCGCGTCTGTGAAAGACAGATTCACCATGTCGAGAGATG  180
V  87.1% (223/256)  IGHV3-49*04  137  .......A.............G..A.G.T.AT.........A.A......................G............C..A.......  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  R  S  I  A  Y  L  V  M  S  S  L  K  T  E  D  T  G  V  Y  Y  C  T  R  D  P  N  S  C  
                    Query_10945  181  ATTCCAGGAGCATCGCCTATCTAGTGATGAGCAGCCTGAAAACCGAAGACACAGGCGTCTATTATTGTACTAGAGATCCCAATTCTTGTG  270
V  87.1% (223/256)  IGHV3-49*04  227  ......AA..............GCAA....A...............G.......C...G.....C...........--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  92.3% (12/13)    IGHD2-21*01  7    -------------------------------------------------------------------------------------.....  11

                                      -------CDR3-IMGT--------------------------->                                 
                                      V  G  D  A  C  A  H  Y  Y  F  S  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10945  271  TTGGTGATGCCTGCGCTCACTATTACTTCTCCGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACTGTCTCCTCA  347
D  92.3% (12/13)    IGHD2-21*01  12   G.......---------------------------------------------------------------------  19
J  91.5% (54/59)    IGHJ6*02     4    ------------------....C....A..A...T................................C.........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_37158

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            318     6e-89
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ5*01                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAGGGGG	AGCAGTGGCTGGTAC	ACGGGCCCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGGGGGAGCAGTGGCTGGTACACGGGCCCCTTCGACTCC	ARVRGSSGWYTGPFDS	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  A  G  S  I  T  S  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10946  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGCTGGCTCCATCACTAGTAATAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.1% (225/247)  IGHV4-4*02   49   ............................G...........GC....G...C.......................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  A  N  Y  Q  P  S  L  W  S  R  V  T  I  S  L  D  R  S  K 
                    Query_10946  91   GAGTGGATTGGAGAAATCTATCATAGTGGGAGCGCCAACTATCAGCCGTCCCTCTGGAGCCGAGTCACCATATCACTAGACAGGTCCAAG  180
V  91.1% (225/247)  IGHV4-4*02   139  ...........G.....................A.......CA.C.........AA...T...............G......A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  Q  F  S  M  D  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  G  S  S  G  W  Y 
                    Query_10946  181  AACCAGTTCTCCATGGACTTGAACTCAGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGAGAGTAAGGGGGAGCAGTGGCTGGTAC  270
V  91.1% (225/247)  IGHV4-4*02   229  ............C..A.GC...G...T.......................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (15/15)   IGHD6-19*01  7    ---------------------------------------------------------------------------...............  21

                                      ----------------->                            
                                       T  G  P  F  D  S  W  G  Q  G  I  L  V  T  V  
                    Query_10946  271  ACGGGCCCCTTCGACTCCTGGGGCCAGGGAATCCTGGTCACCGTCT  316
J  94.6% (35/37)    IGHJ5*01     9    ---------.................A....C..............  45


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_37159

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10947  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTAG  90
V  92.8% (232/250)  IGHV3-21*01  47   ............................................AG..........................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_10947  91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  92.8% (232/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_10947  181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  92.8% (232/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10947  271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_102661

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*14                                                                                           386     1e-109
IGHD2-21*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*14	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGG	TGTGGTGG	GGGCCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTGGTGGGGGCCCCCTTTGACTCC	ARGGVVGAPFDS	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	18	6	0	75
FR3-IMGT	177	290	114	103	11	0	90.4
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	271	24	0	91.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  T  S  G  G  S  F  T 
                    Query_10948  3    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACTTCTGGAGGCAGTTTCACC  92
V  91.9% (271/295)  IGHV1-69*14  1    ...........G...........G.............................................G............CC....G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  M  P  L  F  D  I  A  N  Y 
                    Query_10948  93   AGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGAATCATGCCTCTGTTTGACATAGCAAACTAC  182
V  91.9% (271/295)  IGHV1-69*14  91   ...........................................................G.....C...A.C....GT.C..........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       G  Q  K  F  Q  G  R  V  T  I  T  A  D  K  F  T  R  T  A  Y  M  E  L  N  S  L  R  S  G  D 
                    Query_10948  183  GGACAGAAGTTCCAGGGCAGAGTCACCATTACCGCGGACAAGTTCACGAGGACAGCCTACATGGAGTTGAATAGCCTGAGATCTGGGGAC  272
V  91.9% (271/295)  IGHV1-69*14  181  .C........................G..............A.C......C...............C...GC.............A....  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  I  Y  Y  C  A  R  G  G  V  V  G  A  P  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10948  273  ACGGCCATTTATTACTGTGCGAGAGGAGGTGTGGTGGGGGCCCCCTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  91.9% (271/295)  IGHV1-69*14  271  ......G.G................---------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD2-21*01  8    -----------------------------........---------------------------------------------------  15
J  97.7% (43/44)    IGHJ4*02     5    --------------------------------------------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_319593

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           346     2e-97
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGAGGTCCAAGATGGGCAAATC	TTGTAGTAGTCCCAGCTGCT	CTCG	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGAGGTCCAAGATGGGCAAATCTTGTAGTAGTCCCAGCTGCTCTCGCTAT	AKGRSKMGKSCSSPSCSRY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  T  Y  G  M  H  W  F  R  Q  A  P  G  K  G  L  
                    Query_10949  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCGGGATTCACCTTAAGTACCTATGGCATGCACTGGTTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-30*18  47   ............................T...........C....G................G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  E  S  T  K  K  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  T  S  
                    Query_10949  91   AGTGGGTGGCAGTTATATCATATGATGAAAGTACTAAAAAATATGCAGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAGACACTTCCA  180
V  94.4% (235/249)  IGHV3-30*18  137  ...........................G.....A....T.C............................C..............A.....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  R  S  K  M  G  K  
                    Query_10949  181  AGAACACGCTGTATCTGCAGATGAACGGCCTGAGAGCTGAAGACACGGCTGTCTATTACTGTGCGAAAGGGAGGTCCAAGATGGGCAAAT  270
V  94.4% (235/249)  IGHV3-30*18  227  ...................A......A.............G...........G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      S  C  S  S  P  S  C  S  R  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10949  271  CTTGTAGTAGTCCCAGCTGCTCTCGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  333
D  95.0% (19/20)    IGHD2-2*01   7    -..........A.........------------------------------------------  26
J  94.7% (36/38)    IGHJ4*02     11   -------------------------...C.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_173197

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD6-19*01                                                                                           21.8    0.040
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	C	ATAGAAGTGGCTGG	CCGTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACATAGAAGTGGCTGGCCGTTTGATGCTTTCGAGATC	ARHRSGWPFDAFEI	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	242	222	20	0	91.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  Y  H  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_10950  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAATTATCACTACTGGAGCTGGATCCGGCAGTCTCCAGGGAAGGGACTGGAGT  93
V  91.7% (222/242)  IGHV4-59*01  50   .....TCC...A....C......................G.AG.T.......................C.C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  I  Y  N  P  S  L  E  S  R  V  T  I  S  A  D  T  S  K  K  
                    Query_10950  94   GGATTGGCTATATCTATTACAGTGGGAGCACCATCTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAGC  183
V  91.7% (222/242)  IGHV4-59*01  140  .......G.........................A................A.....................T...............C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  S  A  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  R  S  G  W  P  F  D  A  
                    Query_10950  184  AGTTCTCCCTGAAGCTGAGCGCTGTAACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGACATAGAAGTGGCTGGCCGTTTGATGCTT  273
V  91.7% (222/242)  IGHV4-59*01  230  ....................T....G....................G............A..----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  92.9% (13/14)    IGHD6-19*01  5    ---------------------------------------------------------------....C.........-------------  18
J  88.0% (44/50)    IGHJ3*02     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  E  I  W  G  Q  G  I  K  V  S  V  S  S  
                    Query_10950  274  TCGAGATCTGGGGCCAGGGGATAAAGGTCTCCGTCTCTTCAG  315
J  88.0% (44/50)    IGHJ3*02     9    .T..T...........A....C..T....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_319591

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         371     7e-105
IGHD3-9*01                                                                                            52.6    2e-11 
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACTCCCCT	TTACGATATTTTGACTGGTTATTATAA	GGGGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACTCCCCTTTACGATATTTTGACTGGTTATTATAAGGGGAACTACTACTACGGTTTGGACGTC	ARTPLYDILTGYYKGNYYYGLDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	242	5	0	98


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  S  F  S  G  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10951    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTGGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.0% (242/247)  IGHV3-30-3*01  47   ....................................C.......A.............................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  S  V  I  S  Y  D  G  S  N  K  D  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_10951    91   AGTGGGTGTCAGTTATATCATATGATGGAAGCAATAAAGACTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  98.0% (242/247)  IGHV3-30-3*01  137  ........G.............................T..................A................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><---------------------------
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  T  P  L  Y  D  I  L  
                    Query_10951    181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGGACTCCCCTTTACGATATTTTGA  270
V  98.0% (242/247)  IGHV3-30-3*01  227  ...................................................................-----------------------  293
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (27/27)   IGHD3-9*01     4    ----------------------------------------------------------------------------..............  17

                                        --CDR3-IMGT----------------------------->                                 
                                        T  G  Y  Y  K  G  N  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10951    271  CTGGTTATTATAAGGGGAACTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
D  100.0% (27/27)   IGHD3-9*01     18   .............-------------------------------------------------------------  30
J  98.2% (55/56)    IGHJ6*02       7    ------------------..............A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_270019

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           355     3e-100
IGHD6-25*01                                                                                           12.2    31    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAG	ATAGCGGCG	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCCAGATAGCGGCGCCCTTTGATTAC	TRGQIAAPFDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10952  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-33*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  S  D  G  N  N  K  Y  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10952  91   AGTGGGTGGCAGTTATTTGGTCTGATGGAAATAATAAATATTATGCAGCCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  95.6% (238/249)  IGHV3-33*01  137  ................A....A........G.........C.......A....................................T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  G  S  L  T  A  E  D  T  A  V  Y  Y  C  T  R  G  Q  I  A  A  P  F  
                    Query_10952  181  AGAACACGCTGTATCTGCAAATGGGCAGCCTGACAGCCGAGGACACGGCTGTGTATTACTGTACGAGAGGCCAGATAGCGGCGCCCTTTG  270
V  95.6% (238/249)  IGHV3-33*01  227  .......................AA........G............................G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD6-25*01  5    --------------------------------------------------------------------------.....A...-------  13
J  95.5% (42/44)    IGHJ4*02     5    -------------------------------------------------------------------------------------.....  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_10952  271  ATTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  309
J  95.5% (42/44)    IGHJ4*02     10   .C...................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_319596

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           315     5e-88
IGHD3-10*01                                                                                           16.1    2.4  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCTAG	GTCGTCGGCTTTCCTCCCCCCGGGCGC	GTTCGGGG	GGGTCTATTATTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCTAGGTCGTCGGCTTTCCTCCCCCCGGGCGCGTTCGGGGGGGTCTATTATTTCTACGGTCTGGACGTC	SRSSAFLPPGAFGGVYYFYGLDV	249	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	101	13	0	88.6
CDR3-IMGT (germline)	249	253	5	4	1	0	80
Total	N/A	N/A	253	227	26	0	89.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  S  G  S  D  M  N  W  V  R  Q  A  S  G  K  G  L  
                    Query_10953  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGGTTCAGTGGCTCTGATATGAACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  89.7% (227/253)  IGHV3-73*01  47   .........A.....................G....CC.............C....C.................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  H  I  R  S  K  A  N  N  Y  A  T  A  Y  A  E  S  M  K  G  R  F  I  I  A  R  D  
                    Query_10953  91   AGTGGGTTGGCCATATCAGAAGCAAAGCCAACAATTATGCGACTGCCTACGCTGAGTCCATGAAAGGCAGGTTCATCATCGCCAGAGATG  180
V  89.7% (227/253)  IGHV3-73*01  137  ............G...T...........T....G...C.....A..A..T....C...GG...............C....T.........  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  E  N  T  A  Y  L  Q  M  D  S  L  Q  T  E  D  T  A  V  Y  Y  C  S  R  S  S  A  F  L  
                    Query_10953  181  ACTCAGAGAACACGGCGTATCTGCAAATGGACAGCCTACAAACCGAGGACACGGCCGTCTATTACTGTTCTAGGTCGTCGGCTTTCCTCC  270
V  89.7% (227/253)  IGHV3-73*01  227  .T...A.......................A.......GA...................G.........A....-----------------  299
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    

                                      --------CDR3-IMGT----------------------------->                                
                                      P  P  G  A  F  G  G  V  Y  Y  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_10953  271  CCCCGGGCGCGTTCGGGGGGGTCTATTATTTCTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  349
D  100.0% (8/8)     IGHD3-10*01  12   ----------........-------------------------------------------------------------  19
J  97.9% (47/48)    IGHJ6*02     14   -------------------------------.......A........................................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_81542

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           369     2e-104
IGHD3-10*01                                                                                           14.1    9.5   
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGCC	ACTATGG	GGATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATC	ARSHYGDAYWYLDI	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	97	17	0	85.1
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	292	264	28	0	90.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T  
                    Query_10954  2    AGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATCTTCACCA  91
V  90.4% (264/292)  IGHV1-18*01  2    ....T........G........................................................T..........C...T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  F  E  W  M  G  W  I  S  P  Y  N  G  N  T  A  Y  
                    Query_10954  92   GTTATGGAATCACTTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAGCCTACG  181
V  90.4% (264/292)  IGHV1-18*01  92   .C.....T....GC...........................C.......................G.................AA...T.  181
                                      S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  E  K  F  Q  G  R  F  T  V  A  T  E  T  S  T  N  T  A  F  M  E  L  W  S  L  K  A  D  D  
                    Query_10954  182  CAGAGAAGTTCCAGGGCAGATTCACCGTGGCCACAGAGACTTCCACGAACACAGCCTTCATGGAGCTGTGGAGTCTGAAAGCTGACGACA  271
V  90.4% (264/292)  IGHV1-18*01  182  ..C.....C...........G.....A..A.......C..A.......G........A..........A....C....G.T.........  271
                                      A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  V  Y  Y  C  A  R  S  H  Y  G  D  A  Y  W  Y  L  D  I  W  G  R  G  T  L  V  T  V  S  
                    Query_10954  272  CGGCCGTCTATTACTGTGCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATCTGGGGCCGTGGCACCCTGGTCACTGTCTCCT  361
V  90.4% (264/292)  IGHV1-18*01  272  .......G..............--------------------------------------------------------------------  293
                                      T  A  V  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD3-10*01  6    ---------------------------.......--------------------------------------------------------  12
J  96.2% (51/53)    IGHJ2*01     1    ----------------------------------------..........T.....C.................................  50

                                         
                                      S  
                    Query_10954  362  CAG  364
J  96.2% (51/53)    IGHJ2*01     51   ...  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_319594

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD6-25*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAGG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTC	ARQSSAGRTRYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  D  Y
                    Query_10955  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATTCGACTTTACCGACTA  90
V  94.5% (275/291)  IGHV5-51*01  6    ....................................C.............................T.......A.AG.......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_10955  91   CTGGATCGTCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACGAGATACAGTCC  180
V  94.5% (275/291)  IGHV5-51*01  96   ........G..............T......................................................C........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_10955  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (275/291)  IGHV5-51*01  186  .............................C.............A.......................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  F  C  A  R  Q  S  S  A  G  R  T  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_10955  271  CATGTATTTTTGTGCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTC  360
V  94.5% (275/291)  IGHV5-51*01  276  ........AC...........---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------............................................C..  61

                                       
                                       
                    Query_10955  361  A  361
J  97.9% (47/48)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_319595

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     1e-124
IGHD3-10*01                                                                                           12.2    36    
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTCAATT	TGGTTC	CGCAAATGG	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTCAATTTGGTTCCGCAAATGGCTACCAGTACGGCATGGACGTC	ARFQFGSANGYQYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_10956  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  98.3% (284/289)  IGHV5-51*01  6    .............................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_10956  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_10956  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  F  Q  F  G  S  A  N  G  Y  Q  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_10956  271  CATGTATTACTGTGCGAGATTTCAATTTGGTTCCGCAAATGGCTACCAGTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  98.3% (284/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-10*01  10   ---------------------------......---------------------------------------------------------  15
J  94.5% (52/55)    IGHJ6*02     8    ------------------------------------------....T.C.....T...................................  55

                                             
                                        S  S 
                    Query_10956  361  CTCCTCA  367
J  94.5% (52/55)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_16539

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         327     8e-92
IGHD3-16*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGA	GGGGGAGT	GCGGGTATTCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGGGGAGTGCGGGTATTCCTCTAC	ARGGGVRVFLY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	56	27	24	3	0	88.9
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  R  L  S  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  V  R  Q  P  P  G  K  G  L  
                    Query_10957    4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTTACTCTATTAGCAGTGGTTATTACTGGGGCTGGGTCCGGCAGCCCCCAGGGAAGGGGCTGG  93
V  92.7% (227/245)  IGHV4-38-2*01  50   .....TCC...A......................C..C...........C............A...........................  139
                                           L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  G  S  V  Y  H  S  G  S  T  F  Y  S  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  
                    Query_10957    94   AGTGGATTGGGAGTGTCTATCATAGTGGGAGCACCTTCTACAGCCCGTCCCTCAAGAGCCGAGTCAGCATTTCAGTAGACACGTCCAAGA  183
V  92.7% (227/245)  IGHV4-38-2*01  140  ..............A.....................A.....A...............T.......C...A...................  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                        N  Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  V  R  V  F  L  
                    Query_10957    184  ACCAGTTCTCCCTGAAGGTTAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGGAGGGGGAGTGCGGGTATTCCTCT  273
V  92.7% (227/245)  IGHV4-38-2*01  230  .................C.G..C................................C.........-------------------------  294
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-16*01    18   --------------------------------------------------------------------........--------------  25
J  100.0% (38/38)   IGHJ4*02       11   ----------------------------------------------------------------------------------------..  12

                                        ->                                  
                                        Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10957    274  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (38/38)   IGHJ4*02       13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_155949

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           382     3e-108
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTA	ACGATTT	ACATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACGATTTACATTATGGTATGGACGTC	ARVNDLHYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10958  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATTCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (247/250)  IGHV4-31*01  49   ...................C................................................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 
                    Query_10958  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (247/250)  IGHV4-31*01  139  ..........................................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  D  L  H  Y  G 
                    Query_10958  181  AAGAACCAGCTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTTAACGATTTACATTATGGT  270
V  98.8% (247/250)  IGHV4-31*01  229  .........T............................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   6    -------------------------------------------------------------------------.......----------  12
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10958  271  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  312
J  100.0% (45/45)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_155948

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            339     1e-95
IGHJ2*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	N/A	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	GCACGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCACGGATCCTGGTGCTTCGATTTC	ARHGSWCFDF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  N  T  Y  W  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_10959  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAATACCTACTGGATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-7*03   47   .....................C....................G..G...T......A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  T  D  G  S  T  Q  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_10959  91   AGTGGGTGGCCAACATAAAGACAGATGGAAGTACTCAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACCCCA  180
V  93.9% (232/247)  IGHV3-7*03   137  ....................CA..........GAGA..................................................G...  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      T  N  S  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  H  G  S  W  C  F  D  
                    Query_10959  181  CGAACTCACTGTATTTGCAACTGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGGCACGGATCCTGGTGCTTCGATT  270
V  93.9% (232/247)  IGHV3-7*03   227  A.............C.....A..............................................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  94.0% (47/50)    IGHJ2*01     4    ----------------------------------------------------------------------------.....A.......C  17

                                      ->                                  
                                      F  W  G  R  G  T  L  V  S  V  S  S  
                    Query_10959  271  TCTGGGGCCGTGGCACCCTGGTCAGTGTCTCCTCAG  306
J  94.0% (47/50)    IGHJ2*01     18   ........................C...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_16531

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           293     2e-81
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CTGGAGGGGGC	TTCGGGAAGTTATTATAAC	GGACGGCGGGGGCT	TATCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACTGGAGGGGGCTTCGGGAAGTTATTATAACGGACGGCGGGGGCTTATCGACGTC	ARLEGASGSYYNGRRGLIDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	218	31	0	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  F  S  T  T  D  Y  W  V  W  I  R  Q  T  P  G  K  G 
                    Query_10960  1    ACCCTGTCCCTCACCTGCACCGTCTCTGGCGGCTCCATCTTCAGTACTACTGACTACTGGGTCTGGATCCGCCAGACCCCCGGGAAGGGG  90
V  87.6% (218/249)  IGHV4-39*02  49   ....................T........T.........AG.....G..G.T.........G.............C....A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  A  I  H  H  T  G  R  T  Y  Y  N  P  S  L  E  S  R  S  T  M  S  A  D  T  S 
                    Query_10960  91   CTGGAGTGGATTGGGGCTATTCATCACACTGGGAGAACCTACTACAACCCGTCCCTCGAGAGTCGATCCACCATGTCCGCAGACACATCC  180
V  87.6% (218/249)  IGHV4-39*02  139  ...............AG...CT..T.T.G......C.....................A........GT......A....T......G...  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       S  N  H  F  S  L  N  L  R  S  V  T  A  A  D  T  S  V  Y  Y  C  A  R  L  E  G  A  S  G  S 
                    Query_10960  181  AGCAACCACTTCTCCCTGAACCTGAGGTCTGTGACCGCCGCAGACACGTCTGTTTATTACTGTGCGCGACTGGAGGGGGCTTCGGGAAGT  270
V  87.6% (218/249)  IGHV4-39*02  229  .AG.................G.....C.....................G....G............A..---------------------  297
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.7% (18/19)    IGHD3-10*01  13   --------------------------------------------------------------------------------......G...  22

                                      DR3-IMGT------------------------>                                 
                                       Y  Y  N  G  R  R  G  L  I  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10960  271  TATTATAACGGACGGCGGGGGCTTATCGACGTCTGGGGCCAAGGGACCACGGTCACCGTGTCCTCA  336
D  94.7% (18/19)    IGHD3-10*01  23   .........---------------------------------------------------------  31
J  95.3% (41/43)    IGHJ6*02     20   -----------------------...G................................C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_155946

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           291     5e-81
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	213	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  V  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_10961  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCGTCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  88.8% (213/240)  IGHV4-59*02  49   ..................A......................T.GT.A...C....G.............C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R 
                    Query_10961  91   TGGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGA  180
V  88.8% (213/240)  IGHV4-59*02  139  .......GG.....C.ATT................C..C...........C.....................G.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G 
                    Query_10961  181  CACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGT  270
V  88.8% (213/240)  IGHV4-59*02  229  ..G...........G....G............T..............G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-22*01  7    -----------------------------------------------------------------------------..........A..  19

                                      ----------------------->                                  
                                       G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10961  271  GGCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  328
D  93.3% (14/15)    IGHD3-22*01  20   ..--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    --------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_16533

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           297     7e-83
IGHD1-26*01                                                                                           12.2    31   
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAC	GGGGGCTAC	CCCTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACGGGGGCTACCCCTATGATGCTCTTGACATC	ARDDGGYPYDALDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  P  G  F  S  I  R  D  Y  A  V  H  W  V  R  Q  A  P  G  T  G  L  
                    Query_10962  1    GGTCCCTGAGACTCTCCTGTGCAGCCCCAGGATTCAGTATCAGAGACTATGCTGTGCACTGGGTCCGCCAGGCTCCAGGCACGGGGCTGG  90
V  88.0% (220/250)  IGHV3-30*04  47   ..........................T.T.......CCT....TAG.......A...........................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  A  L  I  S  Y  D  G  T  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10962  91   ACTGGGTGGCTCTTATATCATATGATGGCACGAAGAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  88.0% (220/250)  IGHV3-30*04  137  .G........AG................A.GT..T..................................................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  E  T  V  Y  L  E  M  S  N  L  G  A  D  D  T  A  V  Y  F  C  A  R  D  D  G  G  Y  P  Y  
                    Query_10962  181  GGGAGACGGTGTATCTGGAAATGAGCAACCTGGGGGCTGACGACACGGCTGTCTATTTCTGTGCGAGAGATGACGGGGGCTACCCCTATG  270
V  88.0% (220/250)  IGHV3-30*04  227  A.A.C...C........C......A..G....A.A.....G...........G....A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD1-26*01  9    --------------------------------------------------------------------------...A.....-------  17
J  96.0% (48/50)    IGHJ3*02     1    ----------------------------------------------------------------------------------------..  2

                                      ------------->                                  
                                      D  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10962  271  ATGCTCTTGACATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  318
J  96.0% (48/50)    IGHJ3*02     3    .....T....T.....................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_155943

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           272     2e-75
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ3*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGCCCCATT	TTACTATGATAGTCGTGGTT	TTCACCA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGCCCCATTTTACTATGATAGTCGTGGTTTTCACCATGATGTCTTTGATCTG	ARRAPFYYDSRGFHHDVFDL	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	209	35	0	85.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  L  S  G  G  P  I  T  G  S  Y  W  N  W  F  R  Q  S  P  G  M  G  L  E 
                    Query_10963  1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGGTCCCATTACTGGCTCCTACTGGAACTGGTTCCGGCAGTCCCCAGGTATGGGACTGGAG  90
V  85.7% (209/244)  IGHV4-59*08  49   .....................G..........CT....C.G.A.T.A........G....A........C.......G.A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  T  G  A  T  Y  Y  N  P  S  F  K  S  R  V  T  I  S  V  D  T  S  K  T 
                    Query_10963  91   TGGATTGGCTATGTCTACTACACTGGGGCCACCTACTACAACCCCTCGTTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGACG  180
V  85.7% (209/244)  IGHV4-59*08  139  ........G...A....T....G....AG....A.............CC...................A.....A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  T  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  R  A  P  F  Y  Y  D  S  R 
                    Query_10963  181  CAGTTTACCCTGAACTTGAGTTCTGTCACCGCCGCAGACACGGCCGTCTATTTCTGTGCCAGACGGGCCCCATTTTACTATGATAGTCGT  270
V  85.7% (209/244)  IGHV4-59*08  229  .....CT.......GC....C.....G....................G....A......G....--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.0% (19/20)    IGHD3-22*01  4    --------------------------------------------------------------------------.............A..  19

                                      GT------------------------>                                  
                                       G  F  H  H  D  V  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10963  271  GGTTTTCACCATGATGTCTTTGATCTGTGGGGCCAAGGGACATTGGTCACCGTCTCTTCAG  331
D  95.0% (19/20)    IGHD3-22*01  20   ....---------------------------------------------------------  23
J  90.0% (45/50)    IGHJ3*01     1    -----------.....CT......G.C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_155941

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            352     3e-99
IGHD2-8*02                                                                                            14.1    8.8  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGTAGGCAGGAGCGTT	CTGGTGG	GAACTTCGCGAAGGGCATGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGTAGGCAGGAGCGTTCTGGTGGGAACTTCGCGAAGGGCATGGTACTTTGACAAC	ARGVGRSVLVGTSRRAWYFDN	241	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	236	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T  N  H  N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_10964  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCAATCATAACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  90
V  95.5% (236/247)  IGHV4-4*02   49   ........................................G..G.AG.........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  S  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  K  S  K 
                    Query_10964  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCAGCAACTACAACCCGTCCCTCAAGAGTCGACTCACAATATCAGTGGACAAGTCCAAG  180
V  95.5% (236/247)  IGHV4-4*02   139  ..................................C............................G....C........A............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------------CDR
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  R  S  V  L  V 
                    Query_10964  181  AACCAGTTCTCCCTGAAACTGAGCTCCGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGAGTAGGCAGGAGCGTTCTGGTG  270
V  95.5% (236/247)  IGHV4-4*02   229  .................G........T........................................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD2-8*02   12   ------------------------------------------------------------------------------------......  17

                                      3-IMGT-------------------------->                                  
                                       G  T  S  R  R  A  W  Y  F  D  N  W  G  Q  G  A  Q  V  I  V  S  S  
                    Query_10964  271  GGAACTTCGCGAAGGGCATGGTACTTTGACAACTGGGGCCAGGGAGCCCAGGTCATCGTCTCCTCAG  337
D  100.0% (7/7)     IGHD2-8*02   18   .------------------------------------------------------------------  18
J  91.3% (42/46)    IGHJ4*02     3    ---------------------.........T..............A...T.....C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_16536

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           304     1e-84
IGHD3-3*01                                                                                            23.8    0.011
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCAATCGAGGC	TTTTGGAGTGGT	CGGGGGTCCCTTATCGC	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCAATCGAGGCTTTTGGAGTGGTCGGGGGTCCCTTATCGCTACTTCGATCTC	AREQSRLLEWSGVPYRYFDL	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	14	7	0	66.7
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	219	25	0	89.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  A  P  G  K  G  L  E  
                    Query_10965  4    CCCTGAGACTCTCCTGCACTGTCTCGGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATTCGGCAGGCCCCAGGGAAGGGACTGGAGT  93
V  89.8% (219/244)  IGHV4-59*01  50   .....TCC...A.............T...................................C......C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  F  Y  S  R  G  R  T  N  Y  N  P  A  P  T  T  R  V  T  I  S  A  D  S  S  K  N  
                    Query_10965  94   GGATTGGATATTTCTATAGCAGAGGCAGGACGAACTACAACCCCGCCCCCACGACTCGAGTCACCATATCAGCAGACTCGTCCAAGAACC  183
V  89.8% (219/244)  IGHV4-59*01  140  .......G...A.....TA...T..G..C..C............T...T..A..G.................T....A............  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  S  Y  C  A  R  E  Q  S  R  L  L  E  W  S  
                    Query_10965  184  AGTTCTCCCTGAAGCTCAGCTCTGTTACCGCTGCGGACACGGCCGTTTCTTACTGTGCGAGAGAGCAATCGAGGCTTTTGGAGTGGTCGG  273
V  89.8% (219/244)  IGHV4-59*01  230  ................G........G....................G.A...............--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (12/12)   IGHD3-3*01   11   ---------------------------------------------------------------------------............---  22

                                      T------------------------>                                  
                                      G  V  P  Y  R  Y  F  D  L  W  G  R  G  T  Q  V  T  V  S  S  
                    Query_10965  274  GGGTCCCTTATCGCTACTTCGATCTCTGGGGCCGTGGCACCCAGGTCACTGTCTCCTCAG  333
J  97.8% (45/46)    IGHJ2*01     8    --------------............................T.................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_127449

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            420     7e-120
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	274	5	0	98.2


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_10966  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  98.2% (274/279)  IGHV6-1*01   26   ...........................................................G......G....AG.................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_10966  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.2% (274/279)  IGHV6-1*01   116  ..........................................................................................  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_10966  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.2% (274/279)  IGHV6-1*01   206  ..............A...........................................................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------CDR3-IMGT--------->                                  
                                      C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10966  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  98.2% (274/279)  IGHV6-1*01   296  .........---------------------------------------------------------  304
                                      C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02     4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_127448

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            319     2e-89
IGHD5-18*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	N/A	TGGATACAACTATGG	GAGTGTCCCGGCGGGCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTGGATACAACTATGGGAGTGTCCCGGCGGGCATTGACTAC	AGYNYGSVPAGIDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	242	2	2	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  I  C  A  V  S  G  V  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10967  1    ACCCTGTCCCTCATCTGCGCTGTTTCTGGTGTCTCCATCAGTAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  92.1% (223/242)  IGHV4-4*02   49   .............C.........C.......G.........C................................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  M  Y  H  G  G  T  T  N  Y  K  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K 
                    Query_10967  91   GAGTGGATTGGGGAAATGTACCATGGTGGGACCACCAACTACAAGCCGTCCCTCAAGAGTCGGGTCTCCATATCCGTGGACACGTCCAAG  180
V  92.1% (223/242)  IGHV4-4*02   139  .................C..T...A......G............C.................A...A.......A..A....A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  G  Y  N  Y  G  S  V  P  A 
                    Query_10967  181  AACCAGTTCTCCCTGACGCTGACCTCTGTGACCGCCGCGGACACGGCCATTTATTATTGTGCTGGATACAACTATGGGAGTGTCCCGGCG  270
V  92.1% (223/242)  IGHV4-4*02   229  ................A.....G.........................G.G.....C.....----------------------------  290
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  93.3% (14/15)    IGHD5-18*01  2    --------------------------------------------------------------........G......-------------  16

                                      ----------->                                  
                                       G  I  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_10967  271  GGCATTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  316
J  97.6% (41/42)    IGHJ4*02     7    ----....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_127447

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGCA	N/A	GTATTACTATGGTTC	TT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCAGTATTACTATGGTTCTTTGGACCTC	ARQYYYGSLDL	290	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	24	0	0	100
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	18	6	0	75
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	297	8	7	1	0	87.5
Total	N/A	N/A	295	275	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  G  F  G  Y  S  F  T  
                    Query_10968  3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAGGGGTTTTGGATACAGCTTTACCA  92
V  93.2% (275/295)  IGHV5-51*01  2    ..................................................................A.....C.................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  L  I  F  P  N  D  F  D  A  R  Y  
                    Query_10968  93   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGTAAAGGCTTGGAGTGGATGGGCCTCATCTTTCCTAATGACTTCGATGCCAGATACA  182
V  93.2% (275/295)  IGHV5-51*01  92   ..................................G......C.............GA......A....GG.....CT...A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  L  S  V  D  K  S  T  S  T  A  Y  L  E  W  S  S  L  K  A  S  D  
                    Query_10968  183  GTCCGTCCTTCCAAGGCCAGGTCACCCTCTCAGTCGACAAGTCCACCAGCACCGCCTACCTGGAGTGGAGTAGCCTGAAGGCCTCGGACA  272
V  93.2% (275/295)  IGHV5-51*01  182  .C........................A......C...........T................C.......C...................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------CDR3-IMGT----------->                                 
                                      T  A  I  Y  Y  C  A  R  Q  Y  Y  Y  G  S  L  D  L  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10968  273  CCGCCATTTATTACTGTGCGAGGCAGTATTACTATGGTTCTTTGGACCTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  355
V  93.2% (275/295)  IGHV5-51*01  272  .......G..............A..----------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                             
D  100.0% (15/15)   IGHD3-10*01  1    -------------------------...............-------------------------------------------  15
J  97.6% (40/41)    IGHJ6*02     22   ------------------------------------------.....G...................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_127446

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           324     8e-91
IGHD6-19*01                                                                                           25.7    0.003
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAG	GAGTCGACATT	GCAGTGGCTGGTA	GATCTGCTGGTGA	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGGAGTCGACATTGCAGTGGCTGGTAGATCTGCTGGTGATTTTGATATG	AKGVDIAVAGRSAGDFDM	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  S  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10969  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTCAGCTCATACGGCATCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-30*18  47   .....................C.....................TAGC..T.....G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  G  N  T  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  D  S  
                    Query_10969  91   AGTGGGTGGCAGTAATTTCATATGATGGAGGTAACACATACTATGCAGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAGACGATTCCA  180
V  91.6% (228/249)  IGHV3-30*18  137  .............T..A............A....T.A................................C.............A......  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      I  N  T  L  Y  L  Q  M  T  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  G  V  D  I  A  V  A  
                    Query_10969  181  TTAATACGTTGTATCTGCAAATGACCAGCCTGAGAGCTGAGGACACGGCTGTGTATTTCTGTGCCAAAGGAGTCGACATTGCAGTGGCTG  270
V  91.6% (228/249)  IGHV3-30*18  227  AG..C...C...............A................................A......G....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (13/13)   IGHD6-19*01  8    --------------------------------------------------------------------------------..........  17

                                      IMGT--------------------->                                  
                                      G  R  S  A  G  D  F  D  M  W  G  Q  G  T  R  V  I  V  S  S  
                    Query_10969  271  GTAGATCTGCTGGTGATTTTGATATGTGGGGCCAAGGGACAAGGGTCATCGTCTCTTCAG  330
D  100.0% (13/13)   IGHD6-19*01  18   ...---------------------------------------------------------  20
J  93.2% (41/44)    IGHJ3*02     7    ----------------.........C................T.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_127443

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            276     3e-76
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	96	18	0	84.2
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	211	35	0	85.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10970  1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  85.8% (211/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  S  M  S  V  D  K  S  K 
                    Query_10970  91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCAGCATGTCAGTAGACAAGTCCAAG  180
V  85.8% (211/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A............C...A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  N  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_10970  181  AATCAATTCTCCCTCACGCTGACGTCTCTGAACGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  85.8% (211/246)  IGHV4-4*01   229  ..C..G........G.A.....GC...G...C..................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_10970  271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_127440

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         325     3e-91
IGHD2-2*02                                                                                            35.3    4e-06
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*02	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	GGATATTGTAGTGGTATCAGGTGCTTTACC	GGGGTAG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGGATATTGTAGTGGTATCAGGTGCTTTACCGGGGTAGGGTTCGACCCC	AREGYCSGIRCFTGVGFDP	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	56	30	25	2	3	83.3
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	21	0	0	100
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	16	3	92.4


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  S  V  S  G  D  S  I  S  S  G     Y  S  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_10971    4    CCCTGAGACTCTCCTGTTCTGTCTCTGGTGACTCCATCAGCAGTGGG---TACTCCTGGAGCTGGATCCGGCAGCCACCGGGGAAGGGCC  90
V  92.4% (231/250)  IGHV4-30-2*01  50   .....TCC...A....CG............G...............TGGT.............................A..........  139
                                           L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  *  V  T  I  S  L  D  R  S  
                    Query_10971    91   TGGAGTGGATTGGGTACATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTTGAGTCACCATTTCATTAGACAGGTCCA  180
V  92.4% (231/250)  IGHV4-30-2*01  140  ..............................................................C..........A...G............  229
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                        T  N  Q  V  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  Y  C  S  G  I  
                    Query_10971    181  CGAACCAGGTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTACTGTGCCAGAGAGGGATATTGTAGTGGTATCA  270
V  92.4% (231/250)  IGHV4-30-2*01  230  A.......T................C.............................T..............--------------------  299
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (26/30)    IGHD2-2*02     2    -----------------------------------------------------------------------............A...C..  20

                                        -IMGT----------------------->                                  
                                        R  C  F  T  G  V  G  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10971    271  GGTGCTTTACCGGGGTAGGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  86.7% (26/30)    IGHD2-2*02     21   .C....A....----------------------------------------------------  31
J  100.0% (45/45)   IGHJ5*02       7    ------------------.............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_322123

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           291     5e-81
IGHD3-3*01                                                                                            23.8    0.011
IGHJ5*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TATGGGGTCCAC	TTTTTGGAGTGG	AATTCTCCCGGCG	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATATGGGGTCCACTTTTTGGAGTGGAATTCTCCCGGCGGACCTC	ARDMGSTFWSGILPADL	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	29	25	2	2	86.2
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	125	24	18	5	1	75
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	250	222	25	3	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  S    L  L  C  G  L  W  I  H  L  Q  K  P  L  D  A  L  G  P  P  S  S  R  E  G  A  R
                    Query_10972  1    GGTCCCTGAG--TCTCCTGTGTGGCCTCTGGATTCACCTTCAGAAGCCACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTCG  88
V  88.8% (222/250)  IGHV3-74*01  47   ..........AC.........CA....................T...T........................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        V  D  R  T  Y  *  *  R  G   G  N  T  V  Y  A  D  S  V  N  G  R  F  T  L  S  R  D  N  A  
                    Query_10972  89   AGTGGATCGCACGTATTAATAAAGAGGGG-GCAACACAGTCTACGCGGACTCTGTGAATGGCCGATTCACCCTCTCCAGAGACAACGCCA  177
V  88.8% (222/250)  IGHV3-74*01  137  T....G..T............GT..T...A.T.G....AG............C.....G............A..................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  M  V  Y  L  Q  M  S  S  L  R  P  D  D  T  A  V  Y  F  C  A  R  D  M  G  S  T  F  W  
                    Query_10972  178  AGAACATGGTGTATCTGCAAATGAGCAGTCTGAGACCCGACGACACGGCTGTCTATTTCTGTGCAAGAGATATGGGGTCCACTTTTTGGA  267
V  88.8% (222/250)  IGHV3-74*01  227  ......C.C...............A..........G....G...........G....A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD3-3*01   10   ----------------------------------------------------------------------------------........  17

                                      GT-------------------->                                  
                                      S  G  I  L  P  A  D  L  W  G  P  G  T  L  V  T  V  S  S  
                    Query_10972  268  GTGGAATTCTCCCGGCGGACCTCTGGGGCCCGGGAACCCTGGTCACCGTCTCTTCAG  324
D  100.0% (12/12)   IGHD3-3*01   18   ....-----------------------------------------------------  21
J  92.5% (37/40)    IGHJ5*02     12   -----------------....C........A.....................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_337228

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            346     2e-97
IGHD5-12*01                                                                                           12.2    30   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GAGCGGG	GTGGCT	CCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGAGCGGGGTGGCTCCCTGACTAC	VGGAGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_10973  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGTGACTACTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-7*01   47   ....................................C.......AG...T.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  K  K  D  G  S  E  K  K  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10973  91   AGTGGGTGGCCATCATAAAGAAAGATGGAAGTGAGAAAAAGTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-7*01   137  ............A.......C.................T.C.................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  V  G  G  A  G  W  L  P  D  
                    Query_10973  181  AGAACTCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGTGGGAGGAGCGGGGTGGCTCCCTGACT  270
V  94.4% (235/249)  IGHV3-7*01   227  ...................A...A............C..........................C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD5-12*01  10   ----------------------------------------------------------------------------......--------  15
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10973  271  ACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   .........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_162676

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           336     1e-94
IGHD3-3*01                                                                                            10.3    119  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATC	GAGTG	CCCTTCCAATTTG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCGAGTGCCCTTCCAATTTGACGGTATGGACGTC	ARNRVPFQFDGMDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10974  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTTCTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.2% (229/243)  IGHV4-59*08  49   .......................................A..AG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  N  G  Y  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_10974  91   TGGATTGGCTATATGTATTACAATGGGTACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGTCCAAGAAC  180
V  94.2% (229/243)  IGHV4-59*08  139  ........G.....C.......G....AG.......................................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       L  F  S  L  M  L  T  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  N  R  V  P  F  Q  F  D  G 
                    Query_10974  181  CTGTTCTCCCTGATGCTGACCTCTGTGACCTCCGCAGACACGGCCGTGTATTACTGTGCGAGAAATCGAGTGCCCTTCCAATTTGACGGT  270
V  94.2% (229/243)  IGHV4-59*08  229  .A...........A.....G..........G................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-3*01   16   -------------------------------------------------------------------.....------------------  20
J  95.7% (45/47)    IGHJ6*02     16   -------------------------------------------------------------------------------------.....  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_10974  271  ATGGACGTCTGGGGCCAAGGGACGACGGTCAGCGTCTCCTCA  312
J  95.7% (45/47)    IGHJ6*02     21   .......................C.......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_252919

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            330     1e-92
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGGC	GGGGGA	CCTACCGTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGCGGGGGACCTACCGTGTTTGACTAC	ARGGGGPTVFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	51	0	0	100
CDR2-IMGT	108	128	21	17	4	0	81
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  G  S  I  G  I  T  Y  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_10975  1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCGGCATTACTTACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  92.4% (230/249)  IGHV4-4*02   47   ..A.....TCC...A..........................A...G..G.A.......................................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  A  Y  Y  S  G  S  S  N  Y  S  P  S  L  E  S  R  V  T  I  S  V  D  K  S  
                    Query_10975  91   TGGAGTGGATTGGGGAAGCCTATTATAGTGGGAGCTCCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCA  180
V  92.4% (230/249)  IGHV4-4*02   137  .................AT....C...........A.........A..........A.................................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  R  A  R  G  G  G  G  P  T  V  
                    Query_10975  181  AGAATCAGTTCTCCCTGAAGCTGACATCTGTGACCGCCGCGGACACGGCCGTGTATTACCGTGCGAGAGGCGGCGGGGGACCTACCGTGT  270
V  92.4% (230/249)  IGHV4-4*02   227  ....C...................GC.................................T.........---------------------  295
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  18   --------------------------------------------------------------------------......----------  23
J  100.0% (43/43)   IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10975  271  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (43/43)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_252914

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10976  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01   49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_10976  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01   139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_10976  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01   229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01   13   ----------------------------------------------------------------------.....C..G...--------  24

                                      ----------->                                  
                                       G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_10976  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_252915

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           400     9e-114
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TTTCCAAGGCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTCCAAGGCGACTACTCGGACTTC	ARDFQGDYSDF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  T  C  K  A  S  G  Y  P  F  S  T  Y 
                    Query_10977  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCACCTGCAAGGCTTCTGGTTACCCCTTTAGCACCTAC  91
V  94.1% (273/290)  IGHV1-18*04  7    ......................................................T....................A......C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  H  G  L  E  W  L  G  W  I  S  G  H  N  G  N  T  K  N  A  Q 
                    Query_10977  92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACACGGGCTTGAGTGGCTGGGATGGATCAGCGGTCACAATGGCAACACAAAAAATGCACAG  181
V  94.1% (273/290)  IGHV1-18*04  97   ................................A............A...............C.T.......T........CT........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  D  R  V  T  M  T  T  D  T  S  T  T  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10977  182  AAGTTCCAGGACAGAGTCACCATGACCACAGACACATCCACGACCACAGCGTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.1% (273/290)  IGHV1-18*04  187  ...C......G................................G......C.......................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  D  F  Q  G  D  Y  S  D  F  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_10977  272  GTATATTATTGTGCGAGAGATTTCCAAGGCGACTACTCGGACTTCTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  350
V  94.1% (273/290)  IGHV1-18*04  277  ..G.....C...........-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
J  91.7% (44/48)    IGHJ4*02     1    -------------------------------......TT....A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_252917

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           313     1e-87
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGCTCCCCCCTCAC	TATATCAATGGCTGG	GACT	TTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGCTCCCCCCTCACTATATCAATGGCTGGGACTTTTGGCTTC	ACSPLTISMAGTFGF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	220	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  T  P  G  K  E  L  E 
                    Query_10978  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATAAGTAGTTATTACTGGAACTGGATCCGGCAGACCCCAGGGAAGGAACTGGAG  90
V  91.7% (220/240)  IGHV4-59*08  49   ......................................C........C.......G.............C............G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  T  G  S  A  N  Y  N  P  S  L  K  S  R  V  S  M  S  V  D  S  S  K  N 
                    Query_10978  91   TGGATTGGGTATGTCTATTACACTGGGAGCGCCAACTACAACCCCTCCCTCAAGAGTCGAGTCAGCATGTCGGTGGACTCGTCCAAGAAT  180
V  91.7% (220/240)  IGHV4-59*08  139  ............A.........G.......A.................................C...A..A..A...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  S  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  C  S  P  L  T  I  S  M  A  G 
                    Query_10978  181  CAGTTCTCCCTGAGTCTGAGTTCTGTGACCGCCGCAGACACAGCCATCTATTACTGTGCGTGCTCCCCCCTCACTATATCAATGGCTGGG  270
V  91.7% (220/240)  IGHV4-59*08  229  .............AG.....C....................G...G.G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  86.7% (13/15)    IGHD6-19*01  4    --------------------------------------------------------------------------....G..G.......-  18

                                      ----------->                                  
                                       T  F  G  F  W  G  Q  G  S  L  V  R  V  S  S  
                    Query_10978  271  ACTTTTGGCTTCTGGGGCCAGGGATCCCTGGTCCGCGTCTCCTCAG  316
J  88.4% (38/43)    IGHJ4*02     6    ---....A..A.............A........AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_252911

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           358     4e-101
IGHD2-2*01                                                                                            14.1    8.6   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGAAAGAAACCCAACCCGGTTGGGGGG	GTAGTAG	CCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGAAAGAAACCCAACCCGGTTGGGGGGGTAGTAGCCCTTGACTAC	ARRKKPNPVGGVVALDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  Y  G  M  N  W  V  R  Q  A  P  G  E  G  L  
                    Query_10979  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTACTATGGCATGAATTGGGTCCGCCAGGCTCCAGGGGAGGGGCTGG  90
V  96.4% (238/247)  IGHV3-21*01  47   ............................................AG....A.......C.....................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  G  
                    Query_10979  91   AGTGGGTCTCATCCATTAGTAGTAGCAGTAGTTACATATACTATGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  96.4% (238/247)  IGHV3-21*01  137  .........................T.................C...........................................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  R  K  K  P  N  P  V  
                    Query_10979  181  AGAACTCACTGTATCTGCAAATGAGCAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGAGAAAGAAACCCAACCCGGTTG  270
V  96.4% (238/247)  IGHV3-21*01  227  ........................A..........................................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      GT-------------------->                                  
                                      G  G  V  V  A  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10979  271  GGGGGGTAGTAGCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD2-2*01   9    -----.......---------------------------------------------  15
J  100.0% (42/42)   IGHJ4*02     7    ---------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_252912

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         366     2e-103
IGHD4-17*01                                                                                           18.0    0.61  
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCCCAA	TACGCTGACTAC	GAAGACAACCTGGCTTTG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCCAATACGCTGACTACGAAGACAACCTGGCTTTGTACGGTATGGACGTC	ARDSQYADYEDNLALYGMDV	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_10980    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCATCAGCAGTGGTTACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  97.2% (241/248)  IGHV4-38-2*02  49   ..................A.......................................................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  H  S  G  S  T  H  Y  T  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_10980    91   GAGTGGATTGGGAGTATCTATCATAGTGGGAGCACACACTACACCCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAG  180
V  97.2% (241/248)  IGHV4-38-2*02  139  ...................................CT......A..............................................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-------------------------CDR3
                                         N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  Q  Y  A  D  Y  E 
                    Query_10980    181  AACCAGTTCTCCCTGAACCTGAATTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGATTCCCAATACGCTGACTACGAA  270
V  97.2% (241/248)  IGHV4-38-2*02  229  .................G....GC............................................----------------------  296
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  91.7% (11/12)    IGHD4-17*01    5    ---------------------------------------------------------------------------....G.......---  16

                                        -IMGT------------------------>                                 
                                         D  N  L  A  L  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10980    271  GACAACCTGGCTTTGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
J  100.0% (48/48)   IGHJ6*02       15   ---------------................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_252913

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           355     3e-100
IGHD3-10*01                                                                                           14.1    9.2   
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCCGAATAGGGGGCTCGTGCGACCTACGG	TCGGGGA	CCATTTCGGTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCCGAATAGGGGGCTCGTGCGACCTACGGTCGGGGACCATTTCGGTCACTACTACTACGGTATGGACGAC	AAPNRGLVRPTVGDHFGHYYYGMDD	243	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  T  W  V  R  R  G  P  G  K  G  L  
                    Query_10981  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACCTTTAGCAGCTATGCCATGACCTGGGTCCGCCGGGGTCCAGGGAAGGGGCTGG  90
V  96.3% (236/245)  IGHV3-23*01  47   ...............................A.........................G...........A..C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10981  91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTAGTAACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.3% (236/245)  IGHV3-23*01  137  .............................G...G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  A  P  N  R  G  L  V  R  
                    Query_10981  181  AGAACACCCTGTATCTGCAAATGAACAGCCTGAGAGCAGACGACACGGCCGTATATTACTGTGCGGCCCCGAATAGGGGGCTCGTGCGAC  270
V  96.3% (236/245)  IGHV3-23*01  227  .......G.............................C..G........................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      -----CDR3-IMGT-------------------------------->                                 
                                      P  T  V  G  D  H  F  G  H  Y  Y  Y  G  M  D  D  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10981  271  CTACGGTCGGGGACCATTTCGGTCACTACTACTACGGTATGGACGACTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  350
D  100.0% (7/7)     IGHD3-10*01  14   ------.......-------------------------------------------------------------------  20
J  98.2% (55/56)    IGHJ6*02     7    ------------------------.....................T..................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_70399

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            347     7e-98
IGHD6-25*01                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGGTCTCATGG	GCAGCG	N/A	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTCTCATGGGCAGCGGACTAC	ARDGVSWAADY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  F  S  C  A  A  S  G  F  T  F  S  I  Y  Y  M  R  W  V  R  Q  A  P  G  K  G  L  
                    Query_10982  1    GGTCCCTGAGATTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCATCTATTACATGAGATGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-7*01   47   ...........C...............................T.G.....GG.....C....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  K  G  D  G  S  E  K  Y  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_10982  91   AGTGGGTGGCCAGCATAAAGGGAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-7*01   137  ............A.......CA...................................A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  V  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  V  S  W  A  A  
                    Query_10982  181  AGAATTCACTGTATCTGCAAGTGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGATGGGGTCTCATGGGCAGCGG  270
V  94.4% (236/250)  IGHV3-7*01   227  ....C...............A...............................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD6-25*01  8    -----------------------------------------------------------------------------------......-  13
J  100.0% (40/40)   IGHJ4*02     9    -----------------------------------------------------------------------------------------.  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10982  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (40/40)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_70398

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           291     5e-81
IGHD2-15*01                                                                                           14.1    8.6  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGGGGATTTCGAGAA	GGTGGTA	AATCGGTCAGT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGGGGATTTCGAGAAGGTGGTAAATCGGTCAGTTTTGCCTAC	ARDGGFREGGKSVSFAY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  S  T  Y  T  M  N  W  L  R  Q  A  P  G  K  E  P  
                    Query_10983  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGGTTCAGTACTTATACTATGAACTGGCTTCGCCAGGCTCCAGGGAAGGAGCCGC  90
V  87.2% (218/250)  IGHV3-21*01  47   ....................................CC.......GC....GC.........G.C...................G..T.G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  S  V  S  G  D  G  T  Y  I  Y  Y  A  E  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10983  91   AATGGGTCGCATCTGTGAGTGGAGATGGAACCTACATATACTACGCAGAATCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  87.2% (218/250)  IGHV3-21*01  137  .G......T....CA.T...A.TAG.A.T.GT.................C...G...................................A  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      E  N  S  V  F  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  G  G  F  R  E  G  
                    Query_10983  181  AGAACTCAGTGTTTCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCTGTCTATTATTGTGCGAGAGACGGGGGATTTCGAGAAGGTG  270
V  87.2% (218/250)  IGHV3-21*01  227  ........C...A.......................C...............G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-15*01  14   --------------------------------------------------------------------------------------....  17

                                      GT-------------------->                                  
                                      G  K  S  V  S  F  A  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_10983  271  GTAAATCGGTCAGTTTTGCCTACTGGGGCCAGGGAACCCTTGTCATCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD2-15*01  18   ...------------------------------------------------------  20
J  93.0% (40/43)    IGHJ4*02     6    --------------....A.....................G....C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_337220

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           367     6e-104
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10984  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10984  91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.2% (242/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_10984  181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  97.2% (242/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_10984  271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_346498

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           422     2e-120
IGHD2-2*02                                                                                            19.9    0.18  
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAAAGTGGCGGGGA	ACCAGCTGTTATA	AAGAGCGCTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCC	ARGKWRGTSCYKERCWFDP	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	279	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  S  N  Y
                    Query_10985  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTAGCAACTA  90
V  96.9% (279/288)  IGHV5-51*03  6    .................................................................G...........G.....C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  R  Y  R  P
                    Query_10985  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATAATCTATCCTGGTGACTCTGAGACCAGATACAGACC  180
V  96.9% (279/288)  IGHV5-51*03  96   ........G.............................................C....................T...........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_10985  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (279/288)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  G  K  W  R  G  T  S  C  Y  K  E  R  C  W  F  D  P  W  G  Q  G  T  L  V
                    Query_10985  271  CATGTATTATTGTGCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  360
V  96.9% (279/288)  IGHV5-51*03  276  .........C........------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  92.3% (12/13)    IGHD2-2*02   17   ----------------------------------........C....-------------------------------------------  29
J  100.0% (47/47)   IGHJ5*02     5    ---------------------------------------------------------.................................  37

                                                    
                                        T  V  S  S  
                    Query_10985  361  CACCGTCTCCTCAG  374
J  100.0% (47/47)   IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_263878

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           308     4e-86
IGHD3-10*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGG	CCGAAGGTACCT	TGGGTCGGGGAG	ATTTATACCGTTTTCG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCGAAGGTACCTTGGGTCGGGGAGATTTATACCGTTTTCGGACTAT	ARGRRYLGSGRFIPFSDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	221	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  E  V  Y  G  G  S  F  N  N  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10986  1    ACCCTGTCCCTCACCTGCGAAGTCTATGGTGGGTCCTTCAATAATTACTTCTGGAACTGGATCCGCCAGCCCCCAGGAAAGGGTCTGGAG  90
V  90.2% (221/245)  IGHV4-34*01  49   ...................CT...................G.GG.....A.....G.....................G.....G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  A  S  H  S  G  N  T  N  Y  N  L  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_10986  91   TGGATTGGGGAAGCCAGTCATAGTGGCAACACCAACTACAACCTGTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  90.2% (221/245)  IGHV4-34*01  139  ............AT..A.........A.G..............C............................G.................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  Y  S  L  N  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  Y  L  G  S  G  R 
                    Query_10986  181  CAGTACTCCCTGAACCTGGCTTCTGTGACCGCCGCGGACACGGCTGTCTACTACTGTGCGAGGGGCCGAAGGTACCTTGGGTCGGGGAGA  270
V  90.2% (221/245)  IGHV4-34*01  229  ....T.........G...AGC..........................G..T...........A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  91.7% (11/12)    IGHD3-10*01  10   -----------------------------------------------------------------------------...T........-  21

                                      -------------------->                                  
                                       F  I  P  F  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10986  271  TTTATACCGTTTTCGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.5% (39/40)    IGHJ4*02     9    ---------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_226772

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            350     9e-99
IGHD3-10*01                                                                                           14.1    9.1  
IGHJ6*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAA	AGTCACGGGGGGGAGGA	TATGGTGCGG	ATAATAAGTACTAGTCCCTTCTCCTC	CGGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAAGTCACGGGGGGGAGGATATGGTGCGGATAATAAGTACTAGTCCCTTCTCCTCCGGTCTGGACGTC	AKSHGGEDMVRIISTSPFSSGLDV	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  D  F  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10987  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAGTGATTTTGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  95.2% (236/248)  IGHV3-9*01   47   .....................C...................GA.....A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10987  91   AGTGGGTCTCAAGTATTAGTTGGAATAGTGGCAGCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (236/248)  IGHV3-9*01   137  ...........G...................T..........................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  L  Y  Y  C  A  K  S  H  G  G  E  D  M  
                    Query_10987  181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGCGAGTTGACGACACGGCCTTGTACTATTGTGCAAAAAGTCACGGGGGGGAGGATATGG  270
V  95.2% (236/248)  IGHV3-9*01   227  ..........G.....................A...C...G..............T..C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  90.0% (9/10)     IGHD3-10*01  8    -------------------------------------------------------------------------------------.....  12

                                      ----CDR3-IMGT------------------------------>                              
                                      V  R  I  I  S  T  S  P  F  S  S  G  L  D  V  W  G  Q  G  A  S  V  T  V  S 
                    Query_10987  271  TGCGGATAATAAGTACTAGTCCCTTCTCCTCCGGTCTGGACGTCTGGGGCCAGGGGGCCTCGGTCACCGTCTCC  344
D  90.0% (9/10)     IGHD3-10*01  13   .T...---------------------------------------------------------------------  17
J  90.7% (39/43)    IGHJ6*02     17   -------------------------------....A................A...A..A..............  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_70391

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD5-12*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTGGAGGG	TAGTGGCTAC	TTAGAACCCCTTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGGAGGGTAGTGGCTACTTAGAACCCCTTGACTACTACGGTATGGACGTC	ARLEGSGYLEPLDYYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_10988  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTA  90
V  98.3% (284/289)  IGHV5-51*03  6    ......................................................................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_10988  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ..................................................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_10988  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ............................................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  L  E  G  S  G  Y  L  E  P  L  D  Y  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_10988  271  CATGTATTATTGTGCGAGATTGGAGGGTAGTGGCTACTTAGAACCCCTTGACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  98.3% (284/289)  IGHV5-51*03  276  .........C.........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD5-12*01  8    ---------------------------..........-----------------------------------------------------  17
J  100.0% (53/53)   IGHJ6*02     10   --------------------------------------------------........................................  49

                                                   
                                        T  V  S  S 
                    Query_10988  361  CACCGTCTCCTCA  373
J  100.0% (53/53)   IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_70390

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           346     2e-97
IGHD3-22*01                                                                                           18.0    0.61 
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCTAC	GCGTCGGCTACCG	TGATAGTCGTGG	GGAAGAAGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGCTACGCGTCGGCTACCGTGATAGTCGTGGGGAAGAAGTTTTTGATATA	ARLRVGYRDSRGEEVFDI	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	23	4	0	85.2
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	253	10	9	1	0	90
Total	N/A	N/A	253	237	16	0	93.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  F  S  G  F  S  V  S  S  S  G  M  S  L  S  W  I  R  Q  P  P  G  K  A 
                    Query_10989  1    ACCCTGTCCCTCACCTGCACCTTCTCTGGGTTCTCGGTCAGCAGTAGTGGGATGTCTCTGAGCTGGATCCGTCAGCCCCCAGGGAAGGCC  90
V  93.7% (237/253)  IGHV2-70*01  49   .....CA.A..G.......................AC......C......A....G.G................................  138
                                       T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R  Q  P  P  G  K  A 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T  I  S  K  D  T  S 
                    Query_10989  91   CTGGAGTGGCTTGCACTCATTGATTGGGATGATGATAAGTACTACAGCACATCTCTGAAGACCAGACTCACTATCTCCAAGGACACCTCC  180
V  93.7% (237/253)  IGHV2-70*01  139  ......................................A..........................G.....C..................  228
                                       L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T  I  S  K  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  N  Q  V  V  L  K  M  T  N  M  D  P  V  D  T  A  K  Y  Y  C  A  R  L  R  V  G  Y  R  D 
                    Query_10989  181  AAAAACCAGGTGGTCCTTAAAATGACCAACATGGACCCTGTGGACACAGCCAAGTATTACTGTGCACGGCTACGCGTCGGCTACCGTGAT  270
V  93.7% (237/253)  IGHV2-70*01  229  ...................C................................C................A...-----------------  301
                                       K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  I                   
D  91.7% (11/12)    IGHD3-22*01  10   --------------------------------------------------------------------------------------....  13

                                      -IMGT--------------------->                                  
                                       S  R  G  E  E  V  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_10989  271  AGTCGTGGGGAAGAAGTTTTTGATATATGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  331
D  91.7% (11/12)    IGHD3-22*01  14   ...A....-----------------------------------------------------  21
J  97.7% (43/44)    IGHJ3*02     7    -----------------.........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_337227

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         336     1e-94
IGHD3-10*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGCTCGGC	GGTTCGGGGAGTTA	CC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTCGGCGGTTCGGGGAGTTACCACTAC	ARGLGGSGSYHY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  V  S  G  V  A  F  S  S  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_10990    1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGAGTCGCCTTCAGCAGCTATGCTATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-30-3*01  47   ........................C.......T..A.......T...........G..................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  L  I  S  H  D  G  S  S  K  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_10990    91   AGTGGGTGGCACTTATATCACATGATGGAAGCAGTAAATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-30-3*01  137  ...........G........T............A........A...............................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                        K  N  T  V  Y  L  Q  M  N  S  L  R  N  E  D  T  A  V  Y  Y  C  A  R  G  L  G  G  S  G  S  
                    Query_10990    181  AGAACACGGTATATCTACAGATGAACAGCCTGAGAAATGAGGACACGGCTGTTTATTACTGTGCGAGGGGGCTCGGCGGTTCGGGGAGTT  270
V  93.5% (231/247)  IGHV3-30-3*01  227  ........C.G.....G..A...............GC...............G..............-----------------------  293
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (14/14)   IGHD3-10*01    11   -----------------------------------------------------------------------------.............  23

                                        ------->                                
                                        Y  H  Y  W  G  Q  G  T  L  V  A  V  S  S
                    Query_10990    271  ACCACTACTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  310
D  100.0% (14/14)   IGHD3-10*01    24   .---------------------------------------  24
J  97.3% (36/37)    IGHJ4*02       10   ---..........................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_105786

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           363     2e-102
IGHD1-7*01                                                                                            16.1    2.5   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ACTGGAAATAC	ATAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTC	ARDRTGNTYYGLDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	16	8	0	66.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	261	29	0	90


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  R  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  N  D 
                    Query_10991  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTATACTTTCAGTAATGAT  91
V  90.0% (261/290)  IGHV1-18*01  7    ...............................A.................................T........C..C..T.CC.GCT..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  S  F  N  G  N  T  I  Y  A  Q 
                    Query_10991  92   GGTATTAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAGCTCTTTCAATGGAAACACAATCTACGCACAG  181
V  90.0% (261/290)  IGHV1-18*01  97   .....C............................................A.........G...A......T.......A...T......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  M  T  T  E  T  S  T  T  T  A  Y  M  E  L  R  S  L  T  Y  D  N  T  A 
                    Query_10991  182  AATTTACAGGGCAGAGTTACCATGACCACAGAAACTTCTACGACCACAGCCTACATGGAGCTGAGGAGCCTGACATATGACAACACGGCC  271
V  90.0% (261/290)  IGHV1-18*01  187  ..GC.C...........C..............C..A..C....G.............................G..C....G........  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                 
                                       V  Y  F  C  A  R  D  R  T  G  N  T  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_10991  272  GTGTATTTCTGTGCGAGAGATCGGACTGGAAATACATATTACGGTTTGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  358
V  90.0% (261/290)  IGHV1-18*01  277  .......A............-------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                      
D  90.9% (10/11)    IGHD1-7*01   7    ------------------------.......C...----------------------------------------------------  17
J  95.8% (46/48)    IGHJ6*02     15   ---------------------------------------......A....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_186398

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GGTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGGTCAAGAC	ARGHSYGSGSYYGQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_10992  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_10992  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTGGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ..................................G.............................................A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  S  Y  G  S  G 
                    Query_10992  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  97.6% (244/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  G  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10992  271  AGTTATTATGGTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_186399

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            335     4e-94
IGHD6-13*01                                                                                           12.2    33   
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGTCCCCAAAAGTAGAAAATGT	CTGGTA	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGTCCCCAAAAGTAGAAAATGTCTGGTATGATGCTTTTGATGTC	ARDPSPKVENVWYDAFDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  W  M  T  W  V  R  Q  A  P  G  R  G  L  
                    Query_10993  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAACTATTGGATGACGTGGGTCCGCCAGGCCCCAGGGAGGGGGCTGG  90
V  92.8% (232/250)  IGHV3-7*01   47   .............................................G...........GC..............T.......A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  R  Q  D  G  S  V  E  H  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_10993  91   AGTGGGTGGCCAACATCAGGCAAGATGGAAGTGTGGAACACTTCGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.8% (232/250)  IGHV3-7*01   137  ................A.A..............A.A..T...AT.T............................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  D  P  S  P  K  V  E  
                    Query_10993  181  AGAACTCACTGTATCTGGAAATGAATAGCCTTAGAGCCGAGGACACGGCTGTATATTTCTGTGCGAGAGATCCGTCCCCAAAAGTAGAAA  270
V  92.8% (232/250)  IGHV3-7*01   227  .................C.......C.....G....................G....A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      IMGT--------------------->                                  
                                      N  V  W  Y  D  A  F  D  V  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10993  271  ATGTCTGGTATGATGCTTTTGATGTCTGGGGCCGAGGGACACTGGTCACCGTCTCTTCAG  330
D  100.0% (6/6)     IGHD6-13*01  15   ----......--------------------------------------------------  20
J  96.0% (48/50)    IGHJ3*01     1    ----------.......................A.......A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_186392

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           299     2e-83
IGHD3-3*01                                                                                            21.8    0.042
IGHJ5*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CCA	GATTTTTGGAG	AGATTCACATGCC	GTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGACACCAGATTTTTGGAGAGATTCACATGCCGTTCGACCCC	ARHQIFGEIHMPFDP	250	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	63	36	27	3	6	75
FR2-IMGT	64	114	51	47	4	0	92.2
CDR2-IMGT	115	135	21	18	3	0	85.7
FR3-IMGT	136	249	114	102	12	0	89.5
CDR3-IMGT (germline)	250	257	8	7	1	0	87.5
Total	N/A	N/A	257	228	23	6	88.7


Alignments

                                      <--------FR1-IMGT---------><-------------CDR1-IMGT------------><--------------------FR2-IM
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  T  S  D  S  A  S  F  Y  W  G  W  I  R  Q  P  P  G 
                    Query_10994  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCACCAGTGACAGTGCCAGTTTCTACTGGGGCTGGATCCGCCAGCCCCCAGGG  90
V  88.7% (228/257)  IGHV4-39*01  49   ...............................G........G....---...---....A...............................  132
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S     S     S  Y  Y  W  G  W  I  R  Q  P  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  A  L  E  W  I  G  S  I  Y  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 
                    Query_10994  91   AAGGCACTGGAGTGGATTGGCAGCATATATTATAGTGGGAGTACATTCTATAATCCGTCCCTCAAGAGTCGAGTCACCATATCCGTTGAC  180
V  88.7% (228/257)  IGHV4-39*01  133  ....GG..............G..T..C..............C..C.A...C..C................................A...  222
                                       K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-----------------CDR
                                       R  T  R  N  Q  F  S  L  K  V  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Q  I  F  G 
                    Query_10994  181  AGGACCAGGAACCAATTCTCCCTGAAGGTGAAGTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGCAAGACACCAGATTTTTGGA  270
V  88.7% (228/257)  IGHV4-39*01  223  .C.T...A......G............C...GC..........................G...........G.....-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  100.0% (11/11)   IGHD3-3*01   8    --------------------------------------------------------------------------------..........  17

                                      3-IMGT----------------->                                  
                                       E  I  H  M  P  F  D  P  W  G  Q  G  T  L  A  A  V  S  S  
                    Query_10994  271  GAGATTCACATGCCGTTCGACCCCTGGGGCCAGGGGACCCTGGCCGCCGTCTCCTCAG  328
D  100.0% (11/11)   IGHD3-3*01   18   .---------------------------------------------------------  18
J  93.2% (41/44)    IGHJ5*02     8    --------------.....................A.......T.A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_186393

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGCCGG	AGTAGTGGTTATTACT	CTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGCCGGAGTAGTGGTTATTACTCTTACTACTTTGACTAC	ARGRRSSGYYSYYFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	243	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_10995  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.6% (243/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_10995  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  99.6% (243/244)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  S  S  G  Y  Y  S 
                    Query_10995  181  CAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGTCGCCGGAGTAGTGGTTATTACTCT  270
V  99.6% (243/244)  IGHV4-59*01  229  ...................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (16/16)   IGHD3-22*01  14   ------------------------------------------------------------------------................--  29

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_10995  271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_186390

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           400     9e-114
IGHD1-1*01                                                                                            10.3    134   
IGHJ4*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAACG	GGTAACCCCATATCGCGGC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTAT	ARGTGNPISRLGY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  I  S  C  K  A  S  G  Y  A  F  T  S  Y
                    Query_10996  1    GCAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCATCTGGATACGCCTTCACCAGCTA  90
V  94.1% (273/290)  IGHV1-46*01  6    ..................G.C...............................G.......................A.............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  T  G  G  T  N  Y  A  Q
                    Query_10996  91   TTATATGCACTGGGTACGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTACTGGTGGCACAAATTACGCACA  180
V  94.1% (273/290)  IGHV1-46*01  96   C..............G...................................................GG....A......GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  P  T  S  T  V  Y  L  D  L  S  S  L  E  S  E  D  T  A
                    Query_10996  181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGCCCACGAGCACAGTCTACTTGGACCTGAGCAGCCTGGAATCTGAGGACACGGC  270
V  94.1% (273/290)  IGHV1-46*01  186  .....................................T.................A....G............AG...............  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  G  T  G  N  P  I  S  R  L  G  Y  W  G  Q  G  T  L  V  P  V  S  A  
                    Query_10996  271  CGTTTATTACTGTGCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTATTGGGGCCAGGGAACCCTGGTCCCCGTCTCCGCAG  356
V  94.1% (273/290)  IGHV1-46*01  276  ...G................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (5/5)     IGHD1-1*01   11   --------------------.....-------------------------------------------------------------  15
J  90.5% (38/42)    IGHJ4*02     7    --------------------------------------------...A...C.....................A........T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_186391

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            318     6e-89
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ5*01                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAGGGGG	AGCAGTGGCTGGTAC	ACGGGCCCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGGGGGAGCAGTGGCTGGTACACGGGCCCCTTCGACTCC	ARVRGSSGWYTGPFDS	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  A  G  S  I  T  S  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_10997  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGCTGGCTCCATCACTAGTAATAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.1% (225/247)  IGHV4-4*02   49   ............................G...........GC....G...C.......................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  A  N  Y  Q  P  S  L  W  S  R  V  T  I  S  L  D  R  S  K 
                    Query_10997  91   GAGTGGATTGGAGAAATCTATCATAGTGGGAGCGCCAACTATCAGCCGTCCCTCTGGAGCCGAGTCACCATATCACTAGACAGGTCCAAG  180
V  91.1% (225/247)  IGHV4-4*02   139  ...........G.....................A.......CA.C.........AA...T...............G......A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  Q  F  S  M  D  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  G  S  S  G  W  Y 
                    Query_10997  181  AACCAGTTCTCCATGGACTTGAACTCAGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGAGAGTAAGGGGGAGCAGTGGCTGGTAC  270
V  91.1% (225/247)  IGHV4-4*02   229  ............C..A.GC...G...T.......................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (15/15)   IGHD6-19*01  7    ---------------------------------------------------------------------------...............  21

                                      ----------------->                                  
                                       T  G  P  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10997  271  ACGGGCCCCTTCGACTCCTGGGGCCAGGGAATCCTGGTCACCGTCTCGTCAG  322
J  93.0% (40/43)    IGHJ5*01     9    ---------.................A....C...............C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_186396

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           413     2e-117
IGHD1-26*01                                                                                           10.3    134   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	292	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	10	78	69	68	1	0	98.6
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	109	5	0	95.6
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_10998  10   CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  99
V  95.5% (277/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  Y  A  Q 
                    Query_10998  100  GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTATGCACAG  189
V  95.5% (277/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_10998  190  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  279
V  95.5% (277/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_10998  280  ATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  358
V  95.5% (277/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_186397

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           288     5e-80
IGHD2-2*01                                                                                            12.2    32   
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-2*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TACCAG	TTTTTCTCCCCCGTCGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACCAGTTTTTCTCCCCCGTCGGACTGGTTCTTCGATCTC	ARDTSFSPPSDWFFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  K  A  S  G  F  T  F  K  N  Y  N  M  N  W  V  R  Q  V  P  G  K  G  L  
                    Query_10999  1    GGTCCCTGAGACTCTCCTGTAAAGCCTCTGGATTCACCTTCAAGAACTACAACATGAACTGGGTCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  86.8% (217/250)  IGHV3-21*01  47   ....................GC....................GT.G...T.G....................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  S  R  N  N  D  I  Q  Y  A  D  S  M  K  G  R  I  T  I  S  R  D  N  A  
                    Query_10999  91   AGTGGGTCTCGTCGATTAGGAGTAGGAACAATGACATACAGTACGCAGACTCAATGAAGGGCCGAATCACCATCTCCAGAGACAATGCCA  180
V  86.8% (217/250)  IGHV3-21*01  137  ..........A..C.....T.....T.GT.G.T.....T.C............G...........T...................C....  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  S  S  V  Y  L  H  M  N  N  L  G  A  E  D  T  A  I  Y  F  C  A  R  D  T  S  F  S  P  P  
                    Query_10999  181  ACAGTTCAGTGTATCTCCACATGAACAACCTGGGAGCCGAGGACACGGCTATCTACTTCTGTGCGAGAGATACCAGTTTTTCTCCCCCGT  270
V  86.8% (217/250)  IGHV3-21*01  227  .G.AC...C.......G..A.......G....A.................G.G..T.A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------------------------------------------------......--------------  21

                                      T------------------>                                  
                                      S  D  W  F  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_10999  271  CGGACTGGTTCTTCGATCTCTGGGGCCGTGGCACCCTCGTCACTGTCTCCTCAG  324
J  96.1% (49/51)    IGHJ2*01     3    ---......A...........................G................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_186394

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           276     3e-76
IGHD6-25*01                                                                                           18.0    0.59 
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTG	GCAGCGGCT	GCCACGAACTTCTATCACGACGAAC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCTGGCAGCGGCTGCCACGAACTTCTATCACGACGAACTGGACGTC	VRDLAAAATNFYHDELDV	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	13	8	0	61.9
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	210	34	0	86.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_11000  4    CCCTGAGACTCTCCTGCTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAGT  93
V  86.1% (210/244)  IGHV4-59*01  50   .....TCC...A.....A.....................G............................C....A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  H  F  Y  Y  N  G  E  S  N  Y  N  P  S  L  K  S  R  V  S  I  S  L  D  M  S  K  S  
                    Query_11000  94   GGATTGGCCACTTCTACTACAATGGCGAGTCCAACTACAATCCCTCCCTCAAGAGTCGAGTCTCCATTTCTCTGGACATGTCCAAGAGTC  183
V  86.1% (210/244)  IGHV4-59*01  140  .......GT.TA....T....G...GAGCA..........C.....................A....A..AG.A....C........AC.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  F  T  S  V  T  A  A  D  T  A  V  Y  F  C  V  R  D  L  A  A  A  A  T  N  F  
                    Query_11000  184  AGTTCTCCCTGAAGTTCACTTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGTGAGAGATCTGGCAGCGGCTGCCACGAACTTCT  273
V  86.1% (210/244)  IGHV4-59*01  230  ..............C.G.GC...............................A.....C......--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (9/9)     IGHD6-25*01  8    --------------------------------------------------------------------.........-------------  16

                                      ------------------->                                 
                                      Y  H  D  E  L  D  V  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_11000  274  ATCACGACGAACTGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTCA  326
J  97.6% (40/41)    IGHJ6*02     22   ------------........................C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_186395

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTTTGTGG	TACTCTGGTTCGGGGAGT	AATACCCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTTGTGGTACTCTGGTTCGGGGAGTAATACCCGTTTTGACTAC	ARALWYSGSGSNTRFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_11001  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ...............................G.............................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  T  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11001  91   CTGGAGTGGATTGGATACATCTATTACAGTGGGAGCACCTACTACACCCCGTCCCTCAAGAGTCGAGTTACCATTTCAGTCGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ..............G...............................A...........................A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  L  W  Y  S  G  S 
                    Query_11001  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTTTGTGGTACTCTGGTTCG  270
V  97.6% (244/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  5    ------------------------------------------------------------------------------....A.......  16

                                      MGT-------------------->                                  
                                       G  S  N  T  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11001  271  GGGAGTAATACCCGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  94.4% (17/18)    IGHD3-10*01  17   ......----------------------------------------------------  22
J  100.0% (43/43)   IGHJ4*02     6    ---------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_209037

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD6-19*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	GTAGAGG	GCAGTGGCTGG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTAGAGGGCAGTGGCTGGAACTAC	ARVEGSGWNY	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  G  S  T  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_11002  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCGGCAGTACTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  95.2% (237/249)  IGHV4-39*01  49   ..................A....................A......G..........................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  I  D  T  S 
                    Query_11002  91   CTGGAGTGGATTGGGAGTATCTATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAAGAGTCGACTCACCATATCCATAGACACGTCC  180
V  95.2% (237/249)  IGHV4-39*01  139  ..........................T..............C........................G...........G...........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       E  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  V  E  G  S  G  W  N 
                    Query_11002  181  GAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTATCTATTACTGTGCCAGAGTAGAGGGCAGTGGCTGGAAC  270
V  95.2% (237/249)  IGHV4-39*01  229  A..................................................G.G...........G...---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD6-19*01  8    ----------------------------------------------------------------------------...........---  18
J  97.4% (38/39)    IGHJ4*02     10   ----------------------------------------------------------------------------------------..  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  I  S  S  
                    Query_11002  271  TACTGGGGCCAGGGAACCCTGGTCACCATCTCCTCAG  307
J  97.4% (38/39)    IGHJ4*02     12   ...........................G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_243037

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           31.5    5e-05 
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTGCTT	TGATAGTAGTGGTTAT	GCTCAGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTGCTTTGATAGTAGTGGTTATGCTCAGGACGGTATGGGCGTC	ARESCFDSSGYAQDGMGV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11003  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  S  I  S  S  S  S  N  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11003  91   ACTGGGTCTCATCCATTAGTAGTAGTAGTAATTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  .G............................G...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  R  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  S  C  F  D  S  S  
                    Query_11003  181  AGAACTCACTGTATCTGCAAATGAACAGGCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAAAGTTGCTTTGATAGTAGTG  270
V  98.4% (246/250)  IGHV3-21*01  227  ............................C.........................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (16/16)   IGHD3-22*01  10   -------------------------------------------------------------------------------...........  20

                                      IMGT--------------------->                                 
                                      G  Y  A  Q  D  G  M  G  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_11003  271  GTTATGCTCAGGACGGTATGGGCGTCTGGGGCCAAGGGGCCACGGTCACCGTCTCCTCA  329
D  100.0% (16/16)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  95.7% (45/47)    IGHJ6*02     16   ------------.........A................A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_87532

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           374     8e-106
IGHD1-26*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GTTCCGTAGG	AGTGGGAGCTACTAC	ACTTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGTTCCGTAGGAGTGGGAGCTACTACACTTTGGTACTTTGACTAC	AKGSVGVGATTLWYFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	244	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  M  G  L  
                    Query_11004  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGATGGGGCTGG  90
V  98.0% (244/249)  IGHV3-23*01  47   .................................................................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  R  S  T  Y  Y  A  D  S  V  K  G  R  F  T  F  S  R  D  N  S  
                    Query_11004  91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTCGCAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCTTCTCCAGAGACAATTCCA  180
V  98.0% (244/249)  IGHV3-23*01  137  .............................G.T.......................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  S  V  G  V  G  A  
                    Query_11004  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAAGGTTCCGTAGGAGTGGGAGCTA  270
V  98.0% (244/249)  IGHV3-23*01  227  ....................................................A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD1-26*01  6    -------------------------------------------------------------------------------...........  16

                                      GT-------------------->                                  
                                      T  T  L  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11004  271  CTACACTTTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (15/15)   IGHD1-26*01  17   ....-----------------------------------------------------  20
J  100.0% (46/46)   IGHJ4*02     3    -----------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_333406

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           271     6e-75
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACTTTGACTTC	ARVSTSAYYFDF	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	99	15	0	86.8
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	208	35	0	85.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  Q  P  P  G  K  G  L  E  
                    Query_11005  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGACAACCCCCAGGAAAGGGACTGGAGT  93
V  85.6% (208/243)  IGHV4-59*01  50   .....TCC...A....................T........A.....T.C.........A....G..G........G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  S  F  D  T  S  K  R  
                    Query_11005  94   GGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGTCCTTTGACACGTCCAAGAGGC  183
V  85.6% (208/243)  IGHV4-59*01  140  ......GGT....C...........G.G..C...C................A..G............A..AG.A.............AC.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  S  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  Y  Y  F  D  
                    Query_11005  184  AGTCCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATACTACTTTGACT  273
V  85.6% (208/243)  IGHV4-59*01  230  ...T........A....AGC..........................G............A...---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD2-2*01   17   --------------------------------------------------------------------......----------------  22
J  91.3% (42/46)    IGHJ4*02     1    ------------------------------------------------------------------------------............  12

                                      ->                                
                                      F  W  G  R  G  T  L  V  V  V  S  S
                    Query_11005  274  TCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  307
J  91.3% (42/46)    IGHJ4*02     13   A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_305156

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD1-1*01                                                                                            12.2    32   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AA	TGGAAC	CTCACCCCGGATTA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAAATGGAACCTCACCCCGGATTATACGGTATGGACGTC	AKEMEPHPGLYGMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11006  1    GGTCCCTGAGACTCTCCTGTGCTGCCTCTGGATTTTCCTTCAGTAGTTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-23*01  47   ......................A...........CA....T..C..C...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  L  S  G  S  R  T  Y  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  T  D  N  S  
                    Query_11006  91   AGTGGGTCGCAAGTTTGAGTGGCAGCCGTACTTATACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCACAGACAATTCCA  180
V  90.4% (226/250)  IGHV3-23*01  137  ........T..GC.A.T.....T..TG..GG.AGC...........................................G...........  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  K  E  M  E  P  H  P  G  
                    Query_11006  181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCCTATATTACTGTGCGAAAGAAATGGAACCTCACCCCGGAT  270
V  90.4% (226/250)  IGHV3-23*01  227  .......G............................C.............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   9    ------------------------------------------------------------------------......------------  14

                                      ---------------->                                 
                                      L  Y  G  M  D  V  W  G  H  G  T  T  V  T  V  S  S 
                    Query_11006  271  TATACGGTATGGACGTCTGGGGCCACGGGACCACGGTCACCGTCTCCTCA  320
J  97.9% (47/48)    IGHJ6*02     15   --.......................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_209034

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11007  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_11007  91   CTCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..G...............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G 
                    Query_11007  181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .........................G................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11007  271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_333400

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           374     7e-106
IGHD3-3*01                                                                                            14.1    8.3   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	242	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11008  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (242/245)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_11008  91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.8% (242/245)  IGHV4-34*01  139  .........................................................................T................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_11008  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  98.8% (242/245)  IGHV4-34*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11008  271  GCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_333401

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD3-9*01                                                                                            23.8    0.012 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTTTAAG	CGATATTTTGAC	CGGGGAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTAAGCGATATTTTGACCGGGGAGACTTTGACTTG	ARHFKRYFDRGDFDL	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	277	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  
                    Query_11009  3    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACAGCTTTACTA  92
V  93.9% (277/295)  IGHV5-51*01  2    ....G............................................................A......................C.  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      R  Y  W  I  G  W  A  R  Q  M  S  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  V  K  Y  
                    Query_11009  93   GATATTGGATCGGCTGGGCGCGCCAGATGTCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATGTTAAATACA  182
V  93.9% (277/295)  IGHV5-51*01  92   .C..C.............T..........C.......................................G..........ACC.G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  Q  G  Q  V  T  L  S  A  D  K  S  I  S  T  A  Y  L  Q  W  N  R  L  K  A  S  D  
                    Query_11009  183  ACCCGTCCTTCCAAGGCCAGGTCACCCTTTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAACAGGCTGAAGGCCTCGGACA  272
V  93.9% (277/295)  IGHV5-51*01  182  G.........................A.C........................................G...C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  I  Y  Y  C  A  R  H  F  K  R  Y  F  D  R  G  D  F  D  L  W  G  Q  G  T  L  V  T  V  
                    Query_11009  273  CCGCCATATATTACTGTGCGAGACATTTTAAGCGATATTTTGACCGGGGAGACTTTGACTTGTGGGGCCAGGGAACCCTGGTCACCGTCT  362
V  93.9% (277/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD3-9*01   7    --------------------------------............----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    ---------------------------------------------------.........AC............................  42

                                            
                                      S  S  
                    Query_11009  363  CCTCAG  368
J  95.6% (43/45)    IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_270772

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           318     6e-89
IGHD3-16*01                                                                                           12.2    32   
IGHJ2*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGGCG	TGGGGG	GATCAAGGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGGCGTGGGGGGATCAAGGGATCCTGGTACTCCGATCTC	ARVRRGGIKGSWYSDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11010  1    GGTCCTTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGACATGAAATGAATTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-48*03  47   .....C........................................TT..........C....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  T  G  S  T  L  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11010  91   AGTGGGTTTCACACATCAGTACTGGTAGTACTCTAATAAATTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  90.8% (226/249)  IGHV3-48*03  137  ...........T....T....G.A..G...G.ACC...T.C................................................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      A  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  F  Y  Y  C  A  R  V  R  R  G  G  I  K  
                    Query_11010  181  CGAATTCACTCTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTTTCTATTACTGTGCGAGAGTCCGGCGTGGGGGGATCAAGG  270
V  90.8% (226/249)  IGHV3-48*03  227  A...C.....G.................C.....................G.T................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------------......--------  22

                                      T------------------>                                  
                                      G  S  W  Y  S  D  L  W  G  R  G  T  L  V  V  V  S  S  
                    Query_11010  271  GATCCTGGTACTCCGATCTCTGGGGCCGTGGCACCCTGGTCGTTGTCTCCTCAG  324
J  94.0% (47/50)    IGHJ2*01     4    ----........T............................AC...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_87534

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           325     3e-91
IGHD2-21*01                                                                                           25.7    0.003
IGHJ2*01                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCCAGCTATTTTGTA	GTGGTGGTGCTTGCTA	CGGGGACAAAAGGAG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCCAGCTATTTTGTAGTGGTGGTGCTTGCTACGGGGACAAAAGGAGCTGGTACTTCGATCTC	ARAQLFCSGGACYGDKRSWYFDL	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	30	23	1	6	76.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	248	230	12	6	92.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N        Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_11011  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAAT------TACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  84
V  92.7% (230/248)  IGHV4-39*01  49   ..............................................G.AGTTAC....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  Q  W  I  G  S  I  Y  Y  S  G  D  T  F  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11011  85   CTGCAATGGATTGGGAGTATCTATTATAGTGGTGACACCTTCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  174
V  92.7% (230/248)  IGHV4-39*01  139  ...G.G..........................GAG.....A.................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  K  Q  F  S  L  K  L  S  S  A  T  A  T  D  T  A  V  Y  F  C  A  R  A  Q  L  F  C  S  G 
                    Query_11011  175  AAGAAGCAGTTCTCCCTGAAGCTGAGCTCTGCGACCGCCACAGACACGGCTGTTTATTTCTGTGCGAGGGCCCAGCTATTTTGTAGTGGT  264
V  92.7% (230/248)  IGHV4-39*01  229  .....C.........................T.......G.............G....A.........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  93.8% (15/16)    IGHD2-21*01  9    -------------------------------------------------------------------------------------.....  13

                                      ---CDR3-IMGT----------------------------->                                  
                                       G  A  C  Y  G  D  K  R  S  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11011  265  GGTGCTTGCTACGGGGACAAAAGGAGCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  340
D  93.8% (15/16)    IGHD2-21*01  14   ....A......-----------------------------------------------------------------  24
J  100.0% (50/50)   IGHJ2*01     4    --------------------------..................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_36510

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           321     7e-90
IGHD3-10*01                                                                                           18.0    0.58 
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	TTCTCTTGGCCATTTT	TATGGTTCG	AGTA	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTCTCTTGGCCATTTTTATGGTTCGAGTACTTTTGATATG	ARGSLGHFYGSSTFDM	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  G  A  S  F  S  D  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11012  1    ACCCTGTCCCTCACCTGCACTGTCTATGGTGCGTCCTTCAGTGATTACTTCTGGAACTGGATCCGCCAGCCCCCGGGGAAGGGGCTGGAG  90
V  91.8% (225/245)  IGHV4-34*01  49   ..................G............G...........G.....A.....G..................A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  G  T  N  Y  N  P  S  L  M  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_11012  91   TGGATTGGGGAGATCAATCATAGTGGAGGTACCAACTACAACCCGTCCCTGATGAGTCGAGTCACCATATCAATTGACACGTCTAAGAAC  180
V  91.8% (225/245)  IGHV4-34*01  139  ...........A...............A.C....................C.A...................G.A........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  V  K  L  K  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  G  S  L  G  H  F  Y  G  S 
                    Query_11012  181  CAGTTCTCCGTGAAGTTGAAGTCTGTGGCCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAGGTTCTCTTGGCCATTTTTATGGTTCG  270
V  91.8% (225/245)  IGHV4-34*01  229  .........C.....C...GC......A...................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (9/9)     IGHD3-10*01  8    ---------------------------------------------------------------------------------.........  16

                                      -------------->                                  
                                       S  T  F  D  M  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11012  271  AGTACTTTTGATATGTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  319
J  95.6% (43/45)    IGHJ3*02     6    ----..........C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_12535

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            313     1e-87
IGHD6-13*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACCTGGTACTCGGGGTTTTGACTAC	ARHLGTPGTRGFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	53	27	22	2	3	81.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	248	226	19	3	91.1


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  
                    Query_11013  1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGC  87
V  91.1% (226/248)  IGHV4-4*02   47   ..A.....TCC...A..................G.....T........GTA.......................C...............  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  S  Y  H  S  G  R  T  N  Y  N  A  S  F  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_11013  88   TGGAGTGGATTGGGGAATCCTATCATAGTGGGCGCACCAACTACAACGCGTCCTTCCAGAGTCGAGTCACCATATCAGTAGACACGTCCA  177
V  91.1% (226/248)  IGHV4-4*02   137  .................AT.............A..............C.....C..A...........................A.....  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  P  G  T  
                    Query_11013  178  AGAATCAATTCTCCCTGAATCTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACCTGGTACTC  267
V  91.1% (226/248)  IGHV4-4*02   227  ....C..G...........G....G...........................................----------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-13*01  15   ---------------------------------------------------------------------------------.......--  21

                                      ------------->                                  
                                      R  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11013  268  GGGGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (43/43)   IGHJ4*02     6    -----...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_12534

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11014  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ......................................C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_11014  91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P 
                    Query_11014  181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC  270
V  90.6% (221/244)  IGHV4-59*01  229  ...........G...C....C...........T............G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  95.7% (44/46)    IGHJ5*02     6    ------------------------------------------------------------------------------............  17

                                                                        
                                       W  G  Q  G  A  L  V  S  V  S  S  
                    Query_11014  271  TGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  304
J  95.7% (44/46)    IGHJ5*02     18   ............A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_12537

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            279     3e-77
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	13	8	0	61.9
FR3-IMGT	127	240	114	98	16	0	86
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	212	34	0	86.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11015  1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  86.2% (212/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  G  G  P  F  N  Y  A  P  A  L  E  S  R  V  I  I  S  V  D  K  S  K 
                    Query_11015  91   GAATGGATTGGGGAGATCCATCATGGCGGACCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCATCATCTCAGTAGACAAGTCCAAG  180
V  86.2% (212/246)  IGHV4-4*01   139  ..G...........A...T.....A.T..GAG.AC.......AAC...T.....A............C...A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_11015  181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  86.2% (212/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_11015  271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_238702

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           375     2e-106
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTA	ACGATTT	ACATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACGATTTACATTATGGTATGGACGTC	ARVNDLHYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11016  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATTCGCCAGCACCCAGGGAAGGGC  90
V  98.0% (245/250)  IGHV4-31*01  49   ...................C................................................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  V  G  Y  M  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 
                    Query_11016  91   CTGGAGTGGGTTGGGTACATGTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACGTCT  180
V  98.0% (245/250)  IGHV4-31*01  139  .........A..........C.....................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  D  L  H  Y  G 
                    Query_11016  181  AAGAACCAGCTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTTAACGATTTACATTATGGT  270
V  98.0% (245/250)  IGHV4-31*01  229  .........T............................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   6    -------------------------------------------------------------------------.......----------  12
J  97.8% (44/45)    IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                       M  D  V  W  G  P  G  T  T  V  T  V  S  S 
                    Query_11016  271  ATGGACGTCTGGGGCCCAGGGACCACGGTCACCGTCTCCTCA  312
J  97.8% (44/45)    IGHJ6*02     21   ................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_12531

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11017  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_11017  91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_11017  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11017  271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_136105

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           280     1e-77
IGHD3-16*02                                                                                           14.1    8.6  
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGACGCT	GGAGTAATCG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGACGCTGGAGTAATCGACTACTACGGTATGGACGTC	AREDAGVIDYYGMDV	250	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	135	27	18	3	6	66.7
FR3-IMGT	136	249	114	93	21	0	81.6
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	220	31	6	85.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  R  T  V  S  G  V  S  I  S  S  G  S  Y  Y  W  T  W  I  R  Q  R  P  G  K  G 
                    Query_11018  1    ACCCTGTCCCTCACCCGCACTGTCTCTGGTGTCTCCATCAGCAGTGGTTCTTACTACTGGACGTGGATCCGCCAGCGCCCAGGGAAGGGC  90
V  85.6% (220/257)  IGHV4-31*03  49   ...............T...............G................GG...........GC.............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  N  N  R  G  S  P  G  F  N  P  S  L  M  G  R  T  V  I  S  L  D 
                    Query_11018  91   CTGGAGTGGATTGGGTACATCTATAACAATAATAGAGGGAGCCCCGGCTTCAATCCGTCCCTCATGGGTCGGACTGTCATCTCTCTAGAC  180
V  85.6% (220/257)  IGHV4-31*03  139  ........................T..------..T......A..TA..A...C..........A.A....AGT.AC...A..AG.....  222
                                       L  E  W  I  G  Y  I  Y  Y        S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-----------------CDR
                                       T  S  N  N  L  F  Y  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  E  D  A  G  V 
                    Query_11018  181  ACTTCTAATAACCTGTTCTACCTGAGGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGAGGACGCTGGAGTA  270
V  85.6% (220/257)  IGHV4-31*03  223  ..G.....G....A.....C.....A.....G................................A............-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  90.0% (9/10)     IGHD3-16*02  21   ------------------------------------------------------------------------------------.....T  26

                                      3-IMGT----------------->                                 
                                       I  D  Y  Y  G  M  D  V  W  G  Q  G  I  T  V  T  V  S  S 
                    Query_11018  271  ATCGACTACTACGGTATGGACGTCTGGGGCCAAGGGATCACGGTCACCGTCTCCTCA  327
D  90.0% (9/10)     IGHD3-16*02  27   ....-----------------------------------------------------  30
J  98.1% (52/53)    IGHJ6*02     10   ----.................................C...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_12533

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            343     2e-96
IGHD3-22*01                                                                                           21.8    0.042
IGHJ4*01                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTTTG	ACTATGACAGTCGTGGCTTTTAC	AGACGTTCTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTTTGACTATGACAGTCGTGGCTTTTACAGACGTTCTAACTACTTTGACTTC	ARGFDYDSRGFYRRSNYFDF	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11019  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTACTAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  94.7% (232/245)  IGHV4-4*01   49   ..................G.....................GC.G......C.......................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  Q  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_11019  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCCAGTACAACCCGTCACTCAAGAGTCGAGTCACGATATCAGTAGACAAGTCCAAG  180
V  94.7% (232/245)  IGHV4-4*01   139  ....................................A.C...........C.................C.....................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------------CDR3
                                       N  Q  I  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  F  D  Y  D  S  R  G 
                    Query_11019  181  AACCAGATCTCCCTGAGGTTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGGCTTTGACTATGACAGTCGTGGC  270
V  94.7% (232/245)  IGHV4-4*01   229  ......T.........A.C....................................G.........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  82.6% (19/23)    IGHD3-22*01  6    -------------------------------------------------------------------------.......T...A....T  22

                                      -IMGT------------------------>                                  
                                       F  Y  R  R  S  N  Y  F  D  F  W  G  R  G  T  L  V  A  V  S  S  
                    Query_11019  271  TTTTACAGACGTTCTAACTACTTTGACTTCTGGGGCCGTGGAACCCTGGTCGCTGTCTCCTCAG  334
D  82.6% (19/23)    IGHD3-22*01  23   .A....----------------------------------------------------------  28
J  89.6% (43/48)    IGHJ4*01     1    ----------------............A........AA............A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_136107

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           339     2e-95
IGHD6-19*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CCGGGGAAA	ATAGCGGTGGCTGGT	TACCGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCCGGGGAAAATAGCGGTGGCTGGTTACCGGTTGACTAC	AKAGENSGGWLPVDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  H  S  C  A  A  S  G  F  M  F  S  T  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11020  1    GGTCCCTGAGACACTCCTGTGCTGCCTCTGGATTCATGTTCAGTACTTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-30*18  47   ............T.........A.............CC.......GC.A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  F  D  G  S  N  S  Y  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_11020  91   AGTGGGTGGCAGTTATATCATTTGATGGAAGTAATAGTTATTATGCAGACTCCGTGAAGGGCCGATTGACCATCTCCAGAGACAATTCCA  180
V  93.6% (233/249)  IGHV3-30*18  137  .....................A..............AA..C..........................C......................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  G  E  N  S  G  G  
                    Query_11020  181  AGAACACACTGTTTCTGCAAATGAACAGCCTGAGAGCTGAAGACACGGCTGTTTATTACTGTGCGAAAGCCGGGGAAAATAGCGGTGGCT  270
V  93.6% (233/249)  IGHV3-30*18  227  .......G....A...........................G...........G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (14/15)    IGHD6-19*01  5    ------------------------------------------------------------------------------.....A......  16

                                      ---------------->                                  
                                      W  L  P  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11020  271  GGTTACCGGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  93.3% (14/15)    IGHD6-19*01  17   ...------------------------------------------------  19
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_238709

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_11021  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGAGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCCACTTA  90
V  95.5% (278/291)  IGHV5-51*01  6    .......................................G..........................................A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  N  P
                    Query_11021  91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAACCC  180
V  95.5% (278/291)  IGHV5-51*01  96   C.......G.................................................T.................A.........G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_11021  181  GTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  .......C.....................C...........................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_11021  271  CATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD1-26*01  4    -----------------------------...G....A.....-----------------------------------------------  17
J  93.0% (53/57)    IGHJ6*02     6    ----------------------------------------------......TA....................................  49

                                                   
                                        P  V  S  S 
                    Query_11021  361  CCCCGTCTCGTCA  373
J  93.0% (53/57)    IGHJ6*02     50   .A.......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_136109

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           388     4e-110
IGHD6-13*01                                                                                           18.0    0.57  
IGHJ5*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGTGG	GCAGCAGCT	ACA	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGTGGGCAGCAGCTACACGACCAC	AKDRGQQLHDH	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	249	1	0	99.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11022  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.6% (249/250)  IGHV3-23*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11022  91   AGTGGGTCTCAGGTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  99.6% (249/250)  IGHV3-23*01  137  ............C.............................................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  R  G  Q  Q  L  H  
                    Query_11022  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCGTGGGCAGCAGCTACACG  270
V  99.6% (249/250)  IGHV3-23*01  227  ......................................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD6-13*01  8    ----------------------------------------------------------------------------.........-----  16
J  97.6% (40/41)    IGHJ5*02     11   ----------------------------------------------------------------------------------------..  12

                                      ---->                                  
                                      D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11022  271  ACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.6% (40/41)    IGHJ5*02     13   ...C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_12538

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*04                                                                                           408     4e-116
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  G  S  G  Y  T  F  T  S  Y
                    Query_11023  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.2% (275/289)  IGHV5-51*04  6    ..............................................................A..............G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  T  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_11023  91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCACCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.2% (275/289)  IGHV5-51*04  96   ........G.......................A.......................T...........A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  P  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_11023  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGCCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.2% (275/289)  IGHV5-51*04  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  P  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11023  271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.2% (275/289)  IGHV5-51*04  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_11023  361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_123219

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           308     4e-86
IGHD2-15*01                                                                                           29.5    2e-04
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCGGGACG	TGTAGTGGTGGAAACTGCTAC	GTCCATACTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCGGGACGTGTAGTGGTGGAAACTGCTACGTCCATACTCTTGATATC	ARDPGTCSGGNCYVHTLDI	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	222	25	0	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  S  V  T  S  N  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11024  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGGTTCAGCGTCACCAGCAACTCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.9% (222/247)  IGHV3-53*01  47   ....................G...............C.....GT.......A.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  A  V  I  Y  G  G  G  T  T  R  Y  T  D  S  V  K  G  R  F  T  V  S  R  D  N  F  N  
                    Query_11024  91   AGTGGGTAGCTGTTATTTATGGCGGCGGCACAACACGCTACACAGACTCCGTGAAGGGCCGATTCACCGTTTCCAGAGACAATTTCAACA  180
V  89.9% (222/247)  IGHV3-53*01  137  .......CT.A.........A....T..T.GC...TA....G..........................A.C.............C...G.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------CDR3-IM
                                      N  T  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  P  G  T  C  S  G  G  
                    Query_11024  181  ACACGCTGCATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTCTATTATTGTGCGAGAGATCCCGGGACGTGTAGTGGTGGAA  270
V  89.9% (222/247)  IGHV3-53*01  227  ........T......................................G.G.....C...........-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  90.5% (19/21)    IGHD2-15*01  8    -----------------------------------------------------------------------------...........T.  20

                                      GT----------------------->                                  
                                      N  C  Y  V  H  T  L  D  I  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_11024  271  ACTGCTACGTCCATACTCTTGATATCTGGGGCCAAGGGACAAGGGTCACCGTCTCTTCAG  330
D  90.5% (19/21)    IGHD2-15*01  21   G.......----------------------------------------------------  28
J  97.6% (41/42)    IGHJ3*02     9    ------------------........................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_123216

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            427     1e-121
IGHD3-3*01                                                                                            19.9    0.18  
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGCCGGTCCTA	TTTTGGAGTG	ATACGAGAGCGGTGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGCCGGTCCTATTTTGGAGTGATACGAGAGCGGTGTTACTTTGACTAC	ARCRSYFGVIRERCYFDY	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_11025  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  97.2% (281/289)  IGHV1-2*04   6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  N  G  D  T  H  Y  A  L
                    Query_11025  91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAATGGTGACACACATTATGCACT  180
V  97.2% (281/289)  IGHV1-2*04   96   ....................................................................G.....G....A.C.......A  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        E  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  K  S  D  D  T  A
                    Query_11025  181  GGAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAAATCTGACGACACGGC  270
V  97.2% (281/289)  IGHV1-2*04   186  .A........................................................................G...............  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  C  R  S  Y  F  G  V  I  R  E  R  C  Y  F  D  Y  W  G  Q  G  T  L  V  T
                    Query_11025  271  CGTGTATTACTGTGCGAGATGCCGGTCCTATTTTGGAGTGATACGAGAGCGGTGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCAC  360
V  97.2% (281/289)  IGHV1-2*04   276  ...................-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD3-3*01   11   ------------------------------..........--------------------------------------------------  20
J  100.0% (46/46)   IGHJ4*02     3    -------------------------------------------------------...................................  37

                                                 
                                        V  S  S  
                    Query_11025  361  CGTCTCCTCAG  371
J  100.0% (46/46)   IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_123217

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            272     2e-75
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAGGAC	TAGCACCACCTGG	AGCGGGAACAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGACTAGCACCACCTGGAGCGGGAACATACAACTGGTTCGACCCC	ARLGLAPPGAGTYNWFDP	230	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	17	7	0	70.8
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	19	5	0	79.2
FR3-IMGT	116	229	114	104	10	0	91.2
CDR3-IMGT (germline)	230	235	6	6	0	0	100
Total	N/A	N/A	222	198	24	0	89.2


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  L  R  F  S  S  I  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  H  I  N  Q  D 
                    Query_11026  14   TCTGGACTCAGGTTCAGTAGTATTTGGATGAGCTGGGTCCGCCAGGCTCCTGGGAAGGGGCTGGAGTGGGTGGCCCACATAAATCAAGAT  103
V  89.2% (198/222)  IGHV3-7*01   73   ......T...CC..T.....CTA...........................A........................A.......G......  162
                                       S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  K  Q  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       A  S  D  H  Y  Y  L  D  S  V  K  G  R  F  T  V  S  R  D  N  A  K  S  S  V  F  L  Q  M  N 
                    Query_11026  104  GCAAGTGACCACTACTATCTGGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAATGCCAAGAGTTCAGTGTTTCTGCAAATGAAC  193
V  89.2% (198/222)  IGHV3-7*01   163  .G......GA.A......G..........................A.............C.......AC...C...A.............  252
                                       G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><----------------------CDR3-IMGT--------------------->
                                       S  L  T  A  E  D  T  A  V  Y  Y  C  A  R  L  G  L  A  P  P  G  A  G  T  Y  N  W  F  D  P 
                    Query_11026  194  AGCCTGACAGCCGAAGACACGGCTGTTTATTACTGTGCGAGACTAGGACTAGCACCACCTGGAGCGGGAACATACAACTGGTTCGACCCC  283
V  89.2% (198/222)  IGHV3-7*01   253  .......G......G...........G...............------------------------------------------------  294
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  84.6% (11/13)    IGHD6-13*01  6    -------------------------------------------------.....G..G....----------------------------  18
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------.................  17

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11026  284  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  317
J  100.0% (51/51)   IGHJ5*02     18   ..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_123214

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           25.7    0.003
IGHJ3*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGGAGAGGGGGGATATTA	CAGTGGCTGGTAC	TTAGGCCCGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGAGAGGGGGGATATTACAGTGGCTGGTACTTAGGCCCGAATGCTTATGATTTC	AKGEGGYYSGWYLGPNAYDF	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	126	24	22	2	0	91.7
FR3-IMGT	127	240	114	111	3	0	97.4
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  S  D  Y  P  M  S  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_11027  2    CCCTGTCCCTCACCTGCGCAGCCTCTGGATTCACCTTTAGCGACTATCCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  93.4% (228/244)  IGHV3-23*01  50   .....AGA...T....T........................AG....G..........................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      C  V  S  V  I  S  G  S  G  D  S  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_11027  92   GTGTCTCCGTTATTAGTGGTAGTGGTGACAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGA  181
V  93.4% (228/244)  IGHV3-23*01  140  .G.....A.C.................GT......T......................................................  229
                                      W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------------CDR3-
                                      N  T  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  G  E  G  G  Y  Y  S  G  
                    Query_11027  182  ACACGCTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAAGGGAGAGGGGGGATATTACAGTGGCT  271
V  93.4% (228/244)  IGHV3-23*01  230  .........A............................................A.........--------------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  100.0% (13/13)   IGHD6-19*01  9    ----------------------------------------------------------------------------------........  16

                                      IMGT------------------------>                                  
                                      W  Y  L  G  P  N  A  Y  D  F  W  G  Q  G  T  M  V  S  V  S  S  
                    Query_11027  272  GGTACTTAGGCCCGAATGCTTATGATTTCTGGGGCCAAGGGACAATGGTCTCCGTCTCTTCAG  334
D  100.0% (13/13)   IGHD6-19*01  17   .....----------------------------------------------------------  21
J  93.8% (45/48)    IGHJ3*01     3    ---------------......T....G.......................A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_123212

Length=417
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            397     8e-113
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GAGGGGCAAACGA	TACGATGATAGTGGTAATTATTACT	CGGCCCAACGCGAGTATTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGAGGGGCAAACGATACGATGATAGTGGTAATTATTACTCGGCCCAACGCGAGTATTTCTTTGACTAC	AKERGKRYDDSGNYYSAQREYFFDY	284	358	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  F  T  F  S  N  F 
                    Query_11028  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGATTCACCTTCAGTAACTTT  91
V  93.8% (272/290)  IGHV1-3*01   7    .....T...........G.......................................................A........C..G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  H  W  V  R  Q  A  P  G  Q  S  L  E  W  L  G  W  I  N  A  V  N  G  H  T  K  Y  S  Q 
                    Query_11028  92   GCTATCCATTGGGTGCGCCAGGCCCCCGGACAAAGCCTTGAGTGGCTGGGATGGATCAACGCTGTCAATGGTCACACAAAATATTCACAG  181
V  93.8% (272/290)  IGHV1-3*01   97   .....G.............................G.........A..................G.......A.................  186
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       T  F  Q  G  R  V  I  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  S 
                    Query_11028  182  ACCTTCCAGGGCAGAGTCATCATTACCAGGGACACATCCGCGAGCACAGCCTACATGGAGTTGAGCAGCCTGAGATCTGAAGACACGTCT  271
V  93.8% (272/290)  IGHV1-3*01   187  .AG................C........................................C..........................G..  276
                                       K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><--------------------------------CDR3-IMGT-------------------------------->   
                                       V  Y  Y  C  A  K  E  R  G  K  R  Y  D  D  S  G  N  Y  Y  S  A  Q  R  E  Y  F  F  D  Y  W 
                    Query_11028  272  GTTTATTACTGTGCGAAAGAGAGGGGCAAACGATACGATGATAGTGGTAATTATTACTCGGCCCAACGCGAGTATTTCTTTGACTACTGG  361
V  93.8% (272/290)  IGHV1-3*01   277  ..G.............G...----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  84.0% (21/25)    IGHD3-22*01  5    ---------------------------------...T........A..GG........--------------------------------  29
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------------------------------------.............  17

                                                                     
                                       G  Q  G  S  L  V  T  V  S  S  
                    Query_11028  362  GGCCAGGGAAGCCTGGTCACCGTCTCCTCAG  392
J  97.7% (43/44)    IGHJ4*02     18   ..........C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40919688


Query= Query_123213

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCCCGGCAGG	GTGGGATCTACT	TG	ACGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTC	ARHGPAGWDLLDAMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  N  F  N  S  N
                    Query_11029  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGTTCTGGATACAACTTTAACAGTAA  90
V  93.8% (273/291)  IGHV5-51*01  6    ....................................C.............A..........................G.....C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_11029  91   CTGGATCGGATGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACCAGATATAGGCC  180
V  93.8% (273/291)  IGHV5-51*01  96   .........C..................................................T.......................C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  T  A  D  K  S  T  T  T  A  Y  L  R  W  S  S  L  K  A  S  D  T  A
                    Query_11029  181  GTCCTTCCAAGGCCACGTCACCATTACAGCCGACAAGTCCACCACCACCGCCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.8% (273/291)  IGHV5-51*01  186  ...............G........CT...............T..G..............A..............................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        T  Y  Y  C  A  R  H  G  P  A  G  W  D  L  L  D  A  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_11029  271  CACTTATTACTGTGCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  93.8% (273/291)  IGHV5-51*01  276  ..TG.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD1-26*01  7    ---------------------------------......G.....---------------------------------------------  18
J  97.9% (46/47)    IGHJ6*02     16   -----------------------------------------------...G.......................................  58

                                          
                                        S 
                    Query_11029  361  CTCA  364
J  97.9% (46/47)    IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_123210

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     1e-95
IGHD2-15*01                                                                                           12.2    30   
IGHJ6*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGC	CTACTC	TTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTTCTACGGTATGGACGTC	AREAYSFYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11030  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_11030  91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCTCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G..................A...............C...C...............................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  I  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  F  Y  G  M  D 
                    Query_11030  181  CAGATCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTTCTACGGTATGGAC  270
V  94.3% (231/245)  IGHV4-59*01  229  ...T.....C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-15*01  25   --------------------------------------------------------------------......----------------  30
J  91.8% (45/49)    IGHJ6*02     14   -----------------------------------------------------------------------------.............  26

                                      -->                                 
                                       V  W  G  P  G  P  P  V  I  V  S  S 
                    Query_11030  271  GTCTGGGGCCCAGGGCCCCCGGTCATCGTCTCCTCA  306
J  91.8% (45/49)    IGHJ6*02     27   ..........A....A..A......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_123211

Length=411
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     2e-124
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGCCTACTTTCTTAGTTGGGGTTACTCTGGTA	GTATAACAGCAGCTGG	CGAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTAC	ARHAYFLSWGYSGSITAAGEIDY	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	285	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  A  T  Y
                    Query_11031  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTGCCACCTA  90
V  97.9% (285/291)  IGHV5-51*01  6    ....................................C........................................G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_11031  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  97.9% (285/291)  IGHV5-51*01  96   ............................................................................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_11031  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  97.9% (285/291)  IGHV5-51*01  186  .........................................................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        M  Y  Y  C  A  R  H  A  Y  F  L  S  W  G  Y  S  G  S  I  T  A  A  G  E  I  D  Y  W  G  Q
                    Query_11031  271  CATGTATTACTGTGCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTACTGGGGCCA  360
V  97.9% (285/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  93.8% (15/16)    IGHD6-13*01  3    -----------------------------------------------------.....G..........---------------------  18
J  100.0% (42/42)   IGHJ4*02     7    --------------------------------------------------------------------------................  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_11031  361  GGGAACCCTGGTCACCGTCTCCTCAG  386
J  100.0% (42/42)   IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40288536


Query= Query_122169

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           335     4e-94
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACATG	ATTACCATGAT	TCCA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAACATGATTACCATGATTCCAGATGCTTTTGATATC	ARDNMITMIPDAFDI	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  S  S  I  N  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  A  
                    Query_11032  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTAGCTCCATCAACAGTGGAGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGCCC  93
V  92.8% (232/250)  IGHV4-31*03  50   .....TCC...A.................G.........G......T........................................G..  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  D  S  G  G  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  
                    Query_11032  94   TGGAGTGGATTGGATACATCTATGACAGTGGGGGCACCTCCTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCACTAGACACGTCTA  183
V  92.8% (232/250)  IGHV4-31*03  140  .............G.........T........A......A...........................T.........G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  D  N  M  I  T  M  I  
                    Query_11032  184  GGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACTGTCGCGGACACGGCCGTATATTACTGTGCGAGAGATAACATGATTACCATGATTC  273
V  92.8% (232/250)  IGHV4-31*03  230  A...................C...............C...............G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD3-22*01  3    -----------------------------------------------------------------------------.....T.....--  13

                                      ---------------->                                  
                                      P  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11032  274  CAGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
J  100.0% (49/49)   IGHJ3*02     2    --.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_99999

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           338     4e-95
IGHD2-21*01                                                                                           12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TT	TTGCTA	ATGCGGGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATTTTGCTAATGCGGGGTTTGACTCC	AKDFANAGFDS	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11033  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGGTATGGCATGCATTGGGTCCGCCAGGCGCCAGGCAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-30*18  47   ..............................................C...........C..............T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  Y  V  G  V  I  S  H  D  G  S  H  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11033  91   ACTACGTGGGAGTTATATCACACGATGGCAGTCATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.2% (233/250)  IGHV3-30*18  137  .G.GG....C..........T.T.....A...A.........................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  K  D  F  A  N  A  G  F  
                    Query_11033  181  AGAACACGCTGTATCTCCAAATGAACAGCCTGAGACCTGAGGACACGGCTCTATATTATTGTGCAAAAGATTTTGCTAATGCGGGGTTTG  270
V  93.2% (233/250)  IGHV3-30*18  227  ................G..................G..............G.G.....C.....G.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-21*01  19   ------------------------------------------------------------------------......------------  24
J  93.0% (40/43)    IGHJ4*02     6    --------------------------------------------------------------------------------------....  9

                                      ---->                                  
                                      D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11033  271  ACTCCTGGGGCCAGGGAGCCCTTGTCACCGTCTCCTCAG  309
J  93.0% (40/43)    IGHJ4*02     10   ...A.............A....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_99996

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           372     2e-105
IGHD4-4*01                                                                                            19.9    0.17  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATCAGC	CAGTAACTAC	TCTCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCAGCCAGTAACTACTCTCGGCTAC	ARNQPVTTLGY	281	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	166	21	15	6	0	71.4
FR3-IMGT	167	280	114	104	10	0	91.2
CDR3-IMGT (germline)	281	286	6	6	0	0	100
Total	N/A	N/A	286	262	24	0	91.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  V  T  V  S  N  N
                    Query_11034  1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGGTCACCGTCAGTAACAA  90
V  91.6% (262/286)  IGHV3-53*01  6    ..........G..............................................................T............G...  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  L  S  V  M  Y  S  R  G  A  T  R  Y  A  D  S
                    Query_11034  91   CTATATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGCTCTCAGTCATGTATAGTCGTGGAGCCACAAGGTACGCAGACTC  180
V  91.6% (262/286)  IGHV3-53*01  96   ...C....GC....................................G.......T..T.....CG....TAG....TAC...........  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  R  G  R  F  T  I  S  R  D  S  S  K  N  T  V  Y  L  Q  M  K  N  L  R  V  E  D  T  A  V
                    Query_11034  181  CGTGAGGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGAACACGGTGTATCTTCAAATGAAAAACCTGAGAGTCGAGGACACGGCCGT  270
V  91.6% (262/286)  IGHV3-53*01  186  .....A..........................A.............C................C.G........C...............  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><-----------CDR3-IMGT----------->                                  
                                        Y  Y  C  A  R  N  Q  P  V  T  T  L  G  Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_11034  271  CTATTACTGTGCGAGAAATCAGCCAGTAACTACTCTCGGCTACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  347
V  91.6% (262/286)  IGHV3-53*01  276  G...............-------------------------------------------------------------  291
                                        Y  Y  C  A  R                                                              
D  100.0% (10/10)   IGHD4-4*01   7    -----------------------..........--------------------------------------------  16
J  97.4% (37/38)    IGHJ4*02     11   ---------------------------------------...........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_99997

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           433     1e-123
IGHD3-10*01                                                                                           12.2    37    
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTCAATT	TGGTTC	CGCAAATGG	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTCAATTTGGTTCCGCAAATGGCTACCAGTACGGCATGGACGTC	ARFQFGSANGYQYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  P  H  Y
                    Query_11035  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTAAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTCCCCACTA  90
V  97.9% (283/289)  IGHV5-51*03  6    ................................................G.................................A..AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  S  P
                    Query_11035  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACAGCCC  180
V  97.9% (283/289)  IGHV5-51*03  96   .................................................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11035  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (283/289)  IGHV5-51*03  186  ............................................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  F  Q  F  G  S  A  N  G  Y  Q  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_11035  271  CATGTATTACTGTGCGAGATTTCAATTTGGTTCCGCAAATGGCTACCAGTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  97.9% (283/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-10*01  10   ---------------------------......---------------------------------------------------------  15
J  94.5% (52/55)    IGHJ6*02     8    ------------------------------------------....T.C.....T...................................  55

                                             
                                        S  S 
                    Query_11035  361  CTCCTCA  367
J  94.5% (52/55)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_99994

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-16*01                                                                                           10.3    116  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGACGAGGGGCA	GGGGG	CGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGACGAGGGGCAGGGGGCGGTTGACTCT	ARVDEGQGAVDS	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  K  V  S  G  G  S  I  A  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11036  1    ACCCTGTCCCTCACCTGCAAGGTCTCTGGGGGCTCCATCGCGACTTACTACTGGAGTTGGATCCGACAGCCCCCAGGGAAGGGACTGGAG  90
V  91.8% (224/244)  IGHV4-59*01  49   ...................CT........T.........AGT.G............C........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  V  N  R  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_11036  91   TGGATTGGGTATATCTATTACACTGGCAGTGTCAACCGCAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAC  180
V  91.8% (224/244)  IGHV4-59*01  139  ......................G...G..CAC....TA..............................A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  D  E  G  Q  G  A  V  D 
                    Query_11036  181  CAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTTGACGAGGGGCAGGGGGCGGTTGAC  270
V  91.8% (224/244)  IGHV4-59*01  229  ...............C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -----------------------------------------------------------------------------.....--------  22
J  92.9% (39/42)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11036  271  TCTTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  307
J  92.9% (39/42)    IGHJ4*02     12   .AC.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_99995

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD1-1*01                                                                                            14.1    8.3  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTACCCTG	AACTGGGACG	GACCTTCTGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTACCCTGAACTGGGACGGACCTTCTGCTTTTGACCAC	ARLTLNWDGPSAFDH	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  P  L  T  C  A  V  S  G  D  P  M  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_11037  1    ACCCTGCCCCTCACCTGCGCTGTCTCCGGTGACCCCATGACTAGTTATTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  91.4% (222/243)  IGHV4-59*01  49   ......T...........A.......T....G.T....C.G......C........C........................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  L  S  I  D  T  S  K  N 
                    Query_11037  91   TGGATTGGATATATCTACTACAGTGGGAGCACCAACTACAACCCTTCCCTCAGGAGTCGAGTCACCTTATCGATAGACACGTCCAAGAAC  180
V  91.4% (222/243)  IGHV4-59*01  139  ........G........T..........................C.......A.............A....AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       H  F  S  L  S  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  T  L  N  W  D  G  P  S 
                    Query_11037  181  CACTTCTCCCTGAGCCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGACTTACCCTGAACTGGGACGGACCTTCT  270
V  91.4% (222/243)  IGHV4-59*01  229  ..G..........AG................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD1-1*01   6    ------------------------------------------------------------------------......A...--------  15

                                      ----------->                                  
                                       A  F  D  H  W  G  R  G  T  L  V  A  V  S  S  
                    Query_11037  271  GCTTTTGACCACTGGGGCCGGGGAACCCTGGTCGCCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---......T.........A.............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_99992

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           325     3e-91
IGHD2-15*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGCCCGCTGCCC	GTGGTGGGTGCTA	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATCAGCCCGCTGCCCGTGGTGGGTGCTATGACTAC	VRDQPAARGGCYDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  L  R  S  H  W  M  H  W  V  R  Q  D  P  G  K  G  L  
                    Query_11038  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCCTCAGAAGCCACTGGATGCACTGGGTCCGCCAAGATCCAGGGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-74*01  47   .....................C................T....T...T........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  A  R  I  N  F  D  G  S  S  T  S  Y  V  D  S  V  K  G  R  F  N  I  S  R  D  N  A  
                    Query_11038  91   TATGGGTCGCACGTATTAATTTTGATGGGAGTAGTACAAGTTATGTGGACTCCGTCAAGGGCCGATTCAACATCTCCAGAGACAACGCCA  180
V  91.6% (229/250)  IGHV3-74*01  137  .G......T...........AG............C.....C..C.C.........G.............C....................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  G  V  Y  Y  C  V  R  D  Q  P  A  A  R  G  
                    Query_11038  181  AGAACACATTGTATCTGCAAATGAATAGTCTGAGAGTCGAGGACACGGGTGTGTATTACTGTGTAAGAGATCAGCCCGCTGCCCGTGGTG  270
V  91.6% (229/250)  IGHV3-74*01  227  .......GC................C..........C...........C..............C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.6% (11/13)    IGHD2-15*01  15   ------------------------------------------------------------------------------------.....A  20

                                      ------------->                                  
                                      G  C  Y  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11038  271  GGTGCTATGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  318
D  84.6% (11/13)    IGHD2-15*01  21   .C.....-----------------------------------------  27
J  97.6% (40/41)    IGHJ4*02     8    -------...................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_122162

Length=230
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           260     8e-72
IGHJ4*03                                                                                              35.3    5e-06


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*03	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAAG	N/A	N/A	N/A	GGACC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	182	54	53	1	0	98.1
Total	N/A	N/A	182	174	8	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11039  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGGCATAAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  95.6% (174/182)  IGHV3-21*01  47   ..............................................C...A....G.............................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><----------------------------------FR3-IMGT---------
                                      E  W  V  S  S  I  S  S  S  S  T  F  I  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11039  91   AGTGGGTCTCTTCCATTAGTAGTAGTAGTACTTTCATAGACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (174/182)  IGHV3-21*01  137  ..........A...................G..A....T...................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      ------------------------->
                                      K  G  P  R  S  P  S  P  Q 
                    Query_11039  181  AGGGACCACGGTCACCGTCTCCTCAG  206
V  95.6% (174/182)  IGHV3-21*01  227  ..------------------------  228
                                      K                         
J  91.7% (22/24)    IGHJ4*03     25   --.....CT.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 21621960


Query= Query_122161

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           263     1e-72
IGHD3-3*01                                                                                            16.1    2.1  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCGATG	ACGATTTT	N/A	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCGATGACGATTTTTGGTTTGACCAC	ARSDDDFWFDH	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	205	37	0	84.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  P  I  T  H  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_11040  4    CCCTGAGACTCTCGTGTACTGTCTCTGGTGCCCCCATCACTCATTATTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  84.7% (205/242)  IGHV4-59*08  50   .....TCC...A.C..C.............G.T......G.AG...C.....................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  V  A  Y  I  D  D  R  G  T  T  S  Y  I  P  S  L  K  S  R  V  T  I  S  I  D  T  S  R  Y  
                    Query_11040  94   GGGTAGCATATATTGACGACAGAGGGACCACCAGCTACATTCCCTCCCTCAAGAGTCGAGTCACCATATCGATCGACACGTCCAGGTACC  183
V  84.7% (205/242)  IGHV4-59*08  140  ..A.T.GG.....CT.TT....T....G.....A.....AC.............................AG.A..........A.A...  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  I  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  S  D  D  D  F  W  F  D  H  
                    Query_11040  184  AGATCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCATTTATTTTTGTGCGAGAAGCGATGACGATTTTTGGTTTGACCACT  273
V  84.7% (205/242)  IGHV4-59*08  230  ..T...........C.............................G.G....AC.........----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD3-3*01   6    ---------------------------------------------------------------------........-------------  13
J  93.5% (43/46)    IGHJ5*02     6    -----------------------------------------------------------------------------.....C....C..  18

                                                                       
                                      W  G  Q  G  T  P  V  T  V  S  S  
                    Query_11040  274  GGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  306
J  93.5% (43/46)    IGHJ5*02     19   ...............T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_99991

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           304     1e-84
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACAGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACAGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	99	15	0	86.8
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	218	24	0	90.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_11041  4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAGT  93
V  90.1% (218/242)  IGHV4-34*01  50   .....TCC...A...................G...T..................G...........................G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  R  T  T  Y  N  P  S  F  Q  S  R  V  S  S  S  L  D  M  S  K  K  
                    Query_11041  94   GGATTGGGGAAATCAATCATAGTGGAAGAACCACCTACAACCCGTCCTTCCAGAGTCGCGTCTCCTCATCATTAGACATGTCCAAGAAGC  183
V  90.1% (218/242)  IGHV4-34*01  140  ............................C....A.............C..A.......A...A..AT....G......C.........C.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  V  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y  
                    Query_11041  184  AGTTCTCCGTGAAGGTGACGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAACAGTAAAGGGGGTTATTACTGTCTACC  273
V  90.1% (218/242)  IGHV4-34*01  230  ........C.....C...GC..........................G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD3-22*01  20   -------------------------------------------------------------------------..........-------  29

                                      ------------------->                                 
                                      Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11041  274  AGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (40/40)   IGHJ6*02     23   -------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_235089

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_11042  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_11042  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_11042  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_11042  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_235088

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCTACGAGGCGAGTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATATCTACGAGGCGAGTCATCAATATAGTGGCTACATGATTAATGACTAC	GKDIYEASHQYSGYMINDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11043  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGATATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ..............................................C......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  G  I  S  E  S  G  G  S  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11043  91   ATTGGGTCTCAGGTATTAGTGAAAGTGGTGGTAGCACAAACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  .G..........C........GT...............T...............................................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  I  L  Y  L  Q  M  I  S  L  R  A  E  D  T  A  V  Y  Y  C  G  K  D  I  Y  E  A  S  H  
                    Query_11043  181  AGAATATCCTGTATCTACAAATGATCAGCCTCAGAGCCGAGGACACGGCCGTATATTACTGTGGGAAAGATATCTACGAGGCGAGTCATC  270
V  94.0% (235/250)  IGHV3-23*01  227  ....C.CG........G.......A......G...............................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_11043  271  AATATAGTGGCTACATGATTAATGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  97.6% (40/41)    IGHJ4*02     8    ----------------------.............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_235085

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD3-3*01                                                                                            18.0    0.59 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGCCTCGTGCCTG	GGAGTGGTT	TTGAGGCTATTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGCCTCGTGCCTGGGAGTGGTTTTGAGGCTATTCCTGACTAC	AKSLVPGSGFEAIPDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11044  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTTAGTAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-23*01  47   ............................T..............C.............G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  G  I  T  G  S  G  D  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11044  91   AGTGGCTCTCAGGTATTACTGGCAGTGGTGATAACACCTACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (236/248)  IGHV3-23*01  137  .....G......C.....G...T.......G..G...A....................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  S  L  V  P  G  S  G  
                    Query_11044  181  AGAACACGCTGTATCTGCAAATAAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAAAAGCCTCGTGCCTGGGAGTGGTT  270
V  95.2% (236/248)  IGHV3-23*01  227  ......................G.............................A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD3-3*01   15   ---------------------------------------------------------------------------------.........  23

                                      T------------------>                                  
                                      F  E  A  I  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11044  271  TTGAGGCTATTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (41/41)   IGHJ4*02     8    -------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_235084

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           296     2e-82
IGHD3-22*01                                                                                           14.1    8.3  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GACTAGTGAGAC	AGTAGTG	CTTGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGACTAGTGAGACAGTAGTGCTTGGTGCTTTCGATATG	ARETSETVVLGAFDM	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	217	28	0	88.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  R  S  H  S  W  S  W  I  R  Q  P  P  G  K  G  M  E 
                    Query_11045  1    ACCCTGTCCCTCACCTGCAATGTCTCTGGAGACTCCATCAGAAGTCATTCGTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGAATGGAG  90
V  88.6% (217/245)  IGHV4-59*01  49   ...................C.........T.G.........T...T.C.AC.......................A.........C.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  V  E  Y  R  G  G  S  N  Y  N  P  S  L  N  S  R  L  T  I  S  V  D  M  S  K  N 
                    Query_11045  91   TGGATTGGAAATGTCGAATACAGGGGAGGCTCCAACTACAACCCCTCCCTCAACAGTCGACTCACCATATCAGTGGACATGTCCAAGAAT  180
V  88.6% (217/245)  IGHV4-59*01  139  ........GT..A..T.T.....T..GA..A......................G......G.............A....C.........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  T  S  E  T  V  V  L  G 
                    Query_11045  181  CAGTTCTCCCTGAAGCTGAGCAGTGTGACCGCGGCGGACACGGCCGTCTATTACTGTGCGAGAGAGACTAGTGAGACAGTAGTGCTTGGT  270
V  88.6% (217/245)  IGHV4-59*01  229  .....................TC.........T..............G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-22*01  14   -----------------------------------------------------------------------------.......------  20
J  95.6% (43/45)    IGHJ3*02     4    -----------------------------------------------------------------------------------------.  4

                                      ----------->                                
                                       A  F  D  M  W  G  Q  G  T  M  V  T  V  S  S
                    Query_11045  271  GCTTTCGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  314
J  95.6% (43/45)    IGHJ3*02     5    .....T.....C................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_235087

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           355     3e-100
IGHD6-19*01                                                                                           14.1    8.2   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGTTTCACC	GTGGCTG	ATCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGTTTCACCGTGGCTGATCCTTTTGACTAC	ARGRFTVADPFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  S  T  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11046  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTCAGCACGTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  95.6% (238/249)  IGHV3-64*01  47   ................................T..........T.GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  T  I  S  S  N  G  E  S  T  H  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11046  91   AATATGTTTCAACTATTAGTAGTAATGGGGAGAGCACACATTATGCAAACTCTGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  95.6% (238/249)  IGHV3-64*01  137  ...........G..................GT......T...................................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  G  R  F  T  V  A  D  
                    Query_11046  181  AGAACACGCTGTATCTTCAAATGGGCAGCCTGAGAGGTGAGGACACGGCTGTATATTACTGTGCGAGAGGCCGTTTCACCGTGGCTGATC  270
V  95.6% (238/249)  IGHV3-64*01  227  ....................................C........T......G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-19*01  11   --------------------------------------------------------------------------------.......---  17

                                      ---------->                                  
                                      P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11046  271  CTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (43/43)   IGHJ4*02     6    --...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_235086

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	CCCCCT	TAGGAGCACCTGGTAC	CTACCCCGGGAGGGTCT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGACCCCCTTAGGAGCACCTGGTACCTACCCCGGGAGGGTCTCC	VTPLGAPGTYPGRVS	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	23	1	0	95.8
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	125	24	21	3	0	87.5
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	243	4	3	1	0	75
Total	N/A	N/A	228	217	11	0	95.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  L  F  
                    Query_11047  16   GTGCAGCCTCTGGATTCACCTTTAGCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCACTTTTTA  105
V  95.2% (217/228)  IGHV3-23*01  65   ...........................G.......................................................GC.A...  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  G  D  T  Y  Y  A  D  S  A  R  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_11047  106  GTGGTAGTGGTGGTGACACATACTACGCAGACTCCGCGAGGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATTTGC  195
V  95.2% (217/228)  IGHV3-23*01  155  ..............AG....................T..A..............................................C...  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  T  P  L  G  A  P  G  T  Y  P  G  R  V  S  
                    Query_11047  196  AAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGTGACCCCCTTAGGAGCACCTGGTACCTACCCCGGGAGGGTCTCCT  285
V  95.2% (217/228)  IGHV3-23*01  245  ..................................A..........C..------------------------------------------  292
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  87.5% (14/16)    IGHD6-13*01  6    ------------------------------------------------------...C....G.......--------------------  21
J  100.0% (36/36)   IGHJ5*02     16   ---------------------------------------------------------------------------------------...  18

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11047  286  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (36/36)   IGHJ5*02     19   .................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_235081

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           420     7e-120
IGHD2-21*01                                                                                           14.1    9.2   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGCATACA	ATTGTGG	ACCGGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCATACAATTGTGGACCGGGGACTAC	ARGGIQLWTGDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y 
                    Query_11048  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTAT  91
V  96.5% (279/289)  IGHV1-18*01  7    .....................................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  L  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  V  S  T  Y  I  G  N  T  N  Y  A  Q 
                    Query_11048  92   GGTCTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGGTCAGCACTTACATTGGTAACACAAACTATGCACAG  181
V  96.5% (279/289)  IGHV1-18*01  97   ...A..................................................A.....G......A......................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  A  T  M  T  T  D  T  S  T  S  T  A  Y  L  E  L  K  S  L  R  S  D  D  T  A 
                    Query_11048  182  AAGTTCCAGGGCAGAGCCACCATGACCACAGACACATCCACGAGCACAGCCTACTTGGAGCTGAAGAGCCTGAGATCTGACGACACGGCC  271
V  96.5% (279/289)  IGHV1-18*01  187  ...C............T.....................................A.........G.........................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  G  G  I  Q  L  W  T  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11048  272  GTCTATTACTGTGCGAGAGGGGGCATACAATTGTGGACCGGGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.5% (279/289)  IGHV1-18*01  277  ..G................---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  100.0% (7/7)     IGHD2-21*01  6    -----------------------------.......----------------------------------------------  12
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_235080

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           363     1e-102
IGHD6-19*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AATGGCAA	AGCAGTGGCTGGT	TATGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAATGGCAAAGCAGTGGCTGGTTATGGGCTACTACGGTATGGACGTC	AREMAKQWLVMGYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11049  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGTCTGG  90
V  96.4% (241/250)  IGHV3-48*03  47   .............................................G.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  G  D  N  T  I  Y  Y  A  E  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_11049  91   AGTGGATTTCATACATTAGTAGTGGTGATAATACCATATACTACGCAGAGTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (241/250)  IGHV3-48*03  137  .....G.................A...G..G..................C......A.................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  M  A  K  Q  W  L  
                    Query_11049  181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGAAATGGCAAAGCAGTGGCTGG  270
V  96.4% (241/250)  IGHV3-48*03  227  .....T................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD6-19*01  7    ------------------------------------------------------------------------------............  18

                                      IMGT--------------------->                                 
                                      V  M  G  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11049  271  TTATGGGCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (13/13)   IGHD6-19*01  19   .----------------------------------------------------------  19
J  100.0% (52/52)   IGHJ6*02     11   -------....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_292447

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGATGGA	ATTACTAT	CAAACGAAGCA	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCGATGGAATTACTATCAAACGAAGCAATGGTTTTGATATA	TRGDGITIKRSNGFDI	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_11050  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGGCTTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  94.7% (233/246)  IGHV3-53*01  47   ................................................A.......AGC......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_11050  91   AGTGGGTCTCAGTTATTTACAGCGGTGGTACCACATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.7% (233/246)  IGHV3-53*01  137  ...................T..........G........A..................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  L  Y  Y  C  T  R  G  D  G  I  T  I  K  R  
                    Query_11050  181  ACACGCTGTATCTTCAAATGCACAGCCTGAGAGCCGACGACACGGCCCTGTACTACTGTACGAGAGGCGATGGAATTACTATCAAACGAA  270
V  94.7% (233/246)  IGHV3-53*01  227  ....................A................G.........G....T......G......------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  3    --------------------------------------------------------------------------........--------  10

                                      ---------------->                                  
                                      S  N  G  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11050  271  GCAATGGTTTTGATATATGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  321
J  93.8% (45/48)    IGHJ3*02     3    ---...C.........C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_214216

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD6-13*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTTC	ARHRYLGPRQQATENDF	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  Q  G  S  G  Y  T  F  S  T  Y
                    Query_11051  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTTCCACCTA  90
V  93.8% (273/291)  IGHV5-51*01  6    ..........................................G..................A...............G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  V  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_11051  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGTTGGGAGTCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  93.8% (273/291)  IGHV5-51*01  96   ........G.....................................A....GA.......................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  H  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  F  L  Q  W  S  C  L  K  A  S  D  T  A
                    Query_11051  181  GTCCTTCCATGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAGTTGCCTGAAGGCCTCAGACACCGC  270
V  93.8% (273/291)  IGHV5-51*01  186  .........A............A..............................A............CA.............G........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  W  A  R  H  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  F  L  G  Q  G  T  L  V  T  V
                    Query_11051  271  CATTTATTACTGGGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTTCTTGGGCCAGGGAACCCTGGTCACCGT  360
V  93.8% (273/291)  IGHV5-51*01  276  ...G........T........---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-13*01  8    ---------------------------------------.......--------------------------------------------  14
J  95.1% (39/41)    IGHJ4*02     8    ---------------------------------------------------------.....A..G........................  40

                                              
                                        S  S  
                    Query_11051  361  CTCCTCAG  368
J  95.1% (39/41)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_256110

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           425     3e-121
IGHD3-22*01                                                                                           33.4    2e-05 
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TC	ACTATGAAAGTAGTGATTATTAC	ACAGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCACTATGAAAGTAGTGATTATTACACAGATGATGCTTTTAATATC	ASHYESSDYYTDDAFNI	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	280	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  T  S  G  Y  S  F  T  S  Y
                    Query_11052  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGCTTTACCAGCTA  90
V  97.2% (280/288)  IGHV5-51*03  6    ................................................................GG........................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  L  I  Y  P  S  D  S  D  T  T  Y  S  P
                    Query_11052  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGCCTCATCTATCCCAGTGACTCTGATACCACATACAGCCC  180
V  97.2% (280/288)  IGHV5-51*03  96   ........G..........................................GA..........TG...............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11052  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.2% (280/288)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  S  H  Y  E  S  S  D  Y  Y  T  D  D  A  F  N  I  W  G  Q  G  T  M  V  S  V
                    Query_11052  271  CATGTATTACTGTGCGAGTCACTATGAAAGTAGTGATTATTACACAGATGATGCTTTTAATATCTGGGGCCAAGGGACAATGGTCTCCGT  360
V  97.2% (280/288)  IGHV5-51*03  276  ..................------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  91.3% (21/23)    IGHD3-22*01  6    --------------------.......T.......G.......-----------------------------------------------  28
J  96.0% (48/50)    IGHJ3*02     1    ------------------------------------------------..........G..........................A....  42

                                              
                                        S  S  
                    Query_11052  361  CTCTTCAG  368
J  96.0% (48/50)    IGHJ3*02     43   ........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_256111

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*14                                                                                           369     2e-104
IGHD7-27*01                                                                                           14.1    8.5   
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*14	IGHD7-27*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCATC	CTGGGGA	CC	TTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCATCCTGGGGACCTTACCACTATTACTACGGTTTGGACGTC	ARPSWGPYHYYYGLDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11053  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCGCCAGGCAAGGGGCTGG  90
V  97.6% (242/248)  IGHV3-30*14  47   .........................................................................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  H  D  G  G  T  K  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11053  91   AGTGGGTGGCAGTTATATCACATGATGGAGGCACTAAATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  97.6% (242/248)  IGHV3-30*14  137  ....................T........A.T.A........A...............................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  S  W  G  P  Y  H  
                    Query_11053  181  AGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGACCATCCTGGGGACCTTACCACT  270
V  97.6% (242/248)  IGHV3-30*14  227  ....................................................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD7-27*01  5    -------------------------------------------------------------------------.......----------  11
J  95.1% (58/61)    IGHJ6*02     2    ----------------------------------------------------------------------------------....T...  9

                                      T------------------>                                 
                                      Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11053  271  ATTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  95.1% (58/61)    IGHJ6*02     10   .C.........A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_103159

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           369     2e-104
IGHD5-12*01                                                                                           23.8    0.011 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCTGCTATCGGATACTTT	GTGGCTACGATT	CGGGTGAGGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTGCTATCGGATACTTTGTGGCTACGATTCGGGTGAGGGCATGGACGTC	ARLCYRILCGYDSGEGMDV	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  S  T  N  F  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_11054  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGGAGTACTAATTTCTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  97.2% (243/250)  IGHV4-39*01  49   ...............................G.........C....G..G..A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11054  91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  97.2% (243/250)  IGHV4-39*01  139  ..........................................................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  D  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  C  Y  R  I  L  C 
                    Query_11054  181  AAGGACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACTCTGCTATCGGATACTTTGT  270
V  97.2% (243/250)  IGHV4-39*01  229  ...A.....................G............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD5-12*01  10   ----------------------------------------------------------------------------------------..  11

                                      3-IMGT----------------------->                                 
                                       G  Y  D  S  G  E  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11054  271  GGCTACGATTCGGGTGAGGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
D  100.0% (12/12)   IGHD5-12*01  12   ..........-----------------------------------------------------  21
J  100.0% (42/42)   IGHJ6*02     21   ---------------------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_256113

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            319     2e-89
IGHD6-19*01                                                                                           14.1    8.4  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATCGAACAT	CAGTGGGTGG	AATACACGCTT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATCGAACATCAGTGGGTGGAATACACGCTTTGGACGTC	ARYRTSVGGIHALDV	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	102	12	0	89.5
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	225	21	0	91.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  T  N  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_11055  1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGCCTCCATCAGCAGTACTAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.5% (225/246)  IGHV4-4*02   49   .......................C.......G..............G...........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  N  A  N  L  N  P  S  L  R  S  R  L  S  I  S  V  D  K  S  K 
                    Query_11055  91   GAGTGGATTGGAGAAATATATCATAGTGGGAATGCCAACCTCAACCCGTCCCTCAGGAGTCGTCTTAGCATCTCAGTAGACAAGTCCAAG  180
V  91.5% (225/246)  IGHV4-4*02   139  ...........G.....C.............GCA.....TA..............A......AG.C.C...A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  R  T  S  V  G  G  I 
                    Query_11055  181  AACCAATTCTCCCTGAAGCTGAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGCGAGATATCGAACATCAGTGGGTGGAATA  270
V  91.5% (225/246)  IGHV4-4*02   229  .....G.................C..........................G.....C.........------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  90.0% (9/10)     IGHD6-19*01  9    ----------------------------------------------------------------------------......C...----  18

                                      -------------->                                 
                                       H  A  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11055  271  CACGCTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  100.0% (41/41)   IGHJ6*02     22   -------.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_256115

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           248     8e-68
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	ARGLLIEDPNYVWGSFRRNHNCYTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	92	22	0	80.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	201	43	0	82.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  R  L  E 
                    Query_11056  1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGAGACTGGAG  90
V  82.4% (201/244)  IGHV4-59*01  49   ..................A....C.......G.......A...G..........AG....A.C........C.......A.G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_11056  91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  82.4% (201/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  N  Y 
                    Query_11056  181  CAGTTGTCTCTCAACCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCAACTAT  270
V  82.4% (201/244)  IGHV4-59*01  229  .....C..C..G..G....G.TCT.....................GT.....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_11056  271  GTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  94.7% (36/38)    IGHJ3*01     13   --------------------------------------...................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_256116

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            391     6e-111
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_11057  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.1% (270/290)  IGHV1-8*02   6    ..................G..........................................................C.....C......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_11057  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.1% (270/290)  IGHV1-8*02   96   ........A.........................................................C.......................  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  G  M  S  S  L  N  A  E  D  T  A
                    Query_11057  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGGGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.1% (270/290)  IGHV1-8*02   186  .......C............C.......A..A...C.T....A................A.C..........G.GAT....G........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11057  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.1% (270/290)  IGHV1-8*02   276  ...G................---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01   9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_256117

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           315     5e-88
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CACTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCACTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASTGYGRDAEYFQH	240	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E  
                    Query_11058  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAGT  93
V  91.4% (222/243)  IGHV4-59*08  50   .....TCC...A....C........................A.................A........C.........A...........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  Y  I  H  Y  R  G  S  T  N  Y  N  P  S  L  K  P  R  V  T  I  S  L  D  T  S  K  N  
                    Query_11058  94   GGCTTGGCTATATCCATTACAGGGGGAGCACCAACTACAACCCCTCCCTCAAGCCTCGAGTCACCATTTCATTAGACACGTCCAAGAACC  183
V  91.4% (222/243)  IGHV4-59*08  140  ..A....G......T.......T..............................AG............A...G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------------CDR3-IM
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  T  G  
                    Query_11058  184  AGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCACTGGTT  273
V  91.4% (222/243)  IGHV4-59*08  230  ............A......C..........................G.....C..........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  91.7% (11/12)    IGHD3-10*01  4    ----------------------------------------------------------------------........G...--------  15

                                      GT-------------------------->                                  
                                      Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_11058  274  ATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  336
J  94.2% (49/52)    IGHJ1*01     1    -----------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_256118

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           374     8e-106
IGHD2-15*01                                                                                           37.2    1e-06 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGACTCCC	GGATATTGTCGTGGTGGTAGGTGCT	CCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGACTCCCGGATATTGTCGTGGTGGTAGGTGCTCCGGCTACTACTACGGTTTGGACGTC	ARDRTPGYCRGGRCSGYYYGLDV	244	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	245	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11059  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (245/251)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S 
                    Query_11059  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  97.6% (245/251)  IGHV4-31*03  139  ..........................................................A.......G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       E  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  R  T  P  G  Y  C 
                    Query_11059  181  GAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCATATACTACTGTGCGAGAGATCGGACTCCCGGATATTGT  270
V  97.6% (245/251)  IGHV4-31*03  229  A..................................................G.G..T..............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.0% (23/25)    IGHD2-15*01  2    ---------------------------------------------------------------------------------.........  10

                                      ---CDR3-IMGT----------------------------->                                 
                                       R  G  G  R  C  S  G  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11059  271  CGTGGTGGTAGGTGCTCCGGCTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  345
D  92.0% (23/25)    IGHD2-15*01  11   A..........C....-----------------------------------------------------------  26
J  98.2% (54/55)    IGHJ6*02     8    --------------------.............A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_256119

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           277     9e-77
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	242	3	3	0	0	100
Total	N/A	N/A	239	208	31	0	87


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  G  S  I  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_11060  4    CCCTGAGACTCTCCTGCTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAAT  93
V  87.0% (208/239)  IGHV4-59*01  50   .....TCC...A.....A......................T.GT.A...C....G.............C...................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R  
                    Query_11060  94   GGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGAC  183
V  87.0% (208/239)  IGHV4-59*01  140  ......GG.....C.ATT................C..C...........C.....................G.A.............AC.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G  
                    Query_11060  184  ACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGTG  273
V  87.0% (208/239)  IGHV4-59*01  230  .G...........G....G............T..............G............-------------------------------  288
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  93.3% (14/15)    IGHD3-22*01  7    ----------------------------------------------------------------------------..........A...  20

                                      ---------------------->                                  
                                      G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11060  274  GCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  330
D  93.3% (14/15)    IGHD3-22*01  21   .--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    -------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_103151

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           249     2e-68
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGC	AACC	TCGGGGAG	GACTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACCTCGGGGAGGACTCCCTACTACTATTACGGAATGGACGTC	ATSGRTPYYYYGMDV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	23	4	0	85.2
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	12	9	0	57.1
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	239	2	2	0	0	100
Total	N/A	N/A	239	199	40	0	83.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  M  S  G  G  S  F  N  G  Y  S  W  T  W  V  R  Q  R  P  G  K  G  L  E 
                    Query_11061  1    ACCCTGTCCCTCACCTGCGCGATGTCTGGTGGGTCCTTCAATGGATATTCTTGGACCTGGGTCCGCCAGCGCCCCGGGAAGGGACTGGAG  90
V  83.3% (199/239)  IGHV4-34*01  49   ....................TG.C.A..............G...T..C.AC....G....A.........C...A........G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  S  H  F  K  T  V  N  Y  I  P  T  L  L  G  R  V  N  I  S  I  D  T  S  K  N 
                    Query_11061  91   TGGATTGCGGAAATCAGTCATTTTAAAACCGTTAATTACATCCCGACACTCTTGGGTCGAGTCAACATATCGATAGACACCTCCAAGAAC  180
V  83.3% (199/239)  IGHV4-34*01  139  .......G........A....AG.GG..G.ACC..C....A....T.C...AA.A.........C......AG.......G.........  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  S  G  R  T  P  Y  Y  Y  Y 
                    Query_11061  181  CACTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGCGCAACCTCGGGGAGGACTCCCTACTACTATTAC  270
V  83.3% (199/239)  IGHV4-34*01  229  ..G..........A.....G...........................G........T..-------------------------------  287
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (8/8)     IGHD3-10*01  14   ---------------------------------------------------------------........-------------------  21
J  96.6% (56/58)    IGHJ6*02     5    -----------------------------------------------------------------------------.........C...  17

                                      ----------->                                 
                                       G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11061  271  GGAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  315
J  96.6% (56/58)    IGHJ6*02     18   ..T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_103150

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           392     2e-111
IGHD3-3*01                                                                                            10.3    133   
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CGTCCTCTACCCAGTGCGACCGGAA	GATTT	N/A	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCGTCCTCTACCCAGTGCGACCGGAAGATTTC	AVLYPVRPEDF	290	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	18	6	0	75
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	291	2	2	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  
                    Query_11062  3    AGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCG  92
V  93.4% (270/289)  IGHV1-46*01  2    ....G........G........G..................................................................A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  Y  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  V  N  P  N  N  G  K  T  T  Y  
                    Query_11062  93   ACTACTATATTCACTGGGTGCGACAGGCCCCTGGACAAGGGCTCGAGTGGATGGGAATAGTCAACCCTAATAATGGTAAGACAACCTACG  182
V  93.4% (270/289)  IGHV1-46*01  92   G.........G................................T...............A.........G.GG.....GC....G.....  181
                                      S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  N  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  N  L  R  S  Q  D  
                    Query_11062  183  CACAGAACTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAACTGAGCAACCTGAGATCTCAGGACA  272
V  93.4% (270/289)  IGHV1-46*01  182  .......G........................................................G.......G..........G......  271
                                      A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><-----------CDR3-IMGT----------->                                  
                                      T  A  V  Y  Y  C  A  V  L  Y  P  V  R  P  E  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_11062  273  CGGCCGTCTATTACTGTGCCGTCCTCTACCCAGTGCGACCGGAAGATTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  356
V  93.4% (270/289)  IGHV1-46*01  272  .......G...........-----------------------------------------------------------------  290
                                      T  A  V  Y  Y  C  A                                                                 
D  100.0% (5/5)     IGHD3-3*01   8    --------------------------------------------.....-----------------------------------  12
J  97.1% (34/35)    IGHJ4*02     14   -------------------------------------------------......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_103156

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         414     5e-118
IGHD4-17*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATTTTCA	TGACTACGATGAC	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTCATGACTACGATGACAACTACTTTGACCAG	ARHFHDYDDNYFDQ	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	73	1	0	98.6
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	279	14	0	95.2


Alignments

                                        <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                           M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  D  T  F  T  
                    Query_11063    2    AAATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGAGACACCTTTACCA  91
V  95.2% (279/293)  IGHV5-10-1*01  2    ..G..........................................................................T...G........  91
                                           V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  

                                        T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                        N  Y  W  I  S  W  V  R  Q  R  P  G  K  G  L  E  W  M  G  R  I  D  P  R  E  S  Y  N  D  Y  
                    Query_11063    92   ACTACTGGATCAGCTGGGTGCGCCAGAGGCCAGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTCGTGAATCTTATAACGATTACA  181
V  95.2% (279/293)  IGHV5-10-1*01  92   G..........................T...C....................................A....C.......C.A.C....  181
                                        S  Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  

                                        ----------------------------------------------FR3-IMGT------------------------------------
                                        S  P  S  F  Q  G  H  V  S  I  S  A  D  Q  S  T  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_11063    182  GCCCGTCCTTCCAAGGCCACGTCAGCATCTCAGCTGACCAGTCCACCAGCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  95.2% (279/293)  IGHV5-10-1*01  182  ........................C.............A......T............................................  271
                                        S  P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                        ----------------><----------------CDR3-IMGT--------------->                               
                                        T  A  M  Y  Y  C  A  R  H  F  H  D  Y  D  D  N  Y  F  D  Q  W  G  Q  G  T  L  V  T  V  S  
                    Query_11063    272  CCGCCATGTATTACTGTGCGAGACATTTTCATGACTACGATGACAACTACTTTGACCAGTGGGGCCAGGGAACCCTGGTCACTGTCTCCT  361
V  95.2% (279/293)  IGHV5-10-1*01  272  .......................-------------------------------------------------------------------  294
                                        T  A  M  Y  Y  C  A  R                                                                    
D  92.3% (12/13)    IGHD4-17*01    1    -------------------------------........G....----------------------------------------------  13
J  93.8% (45/48)    IGHJ4*02       1    ---------------------------------------------...........T.C.......................C.......  45

                                           
                                        S  
                    Query_11063    362  CAG  364
J  93.8% (45/48)    IGHJ4*02       46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_103155

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           403     1e-114
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCT	CAGTGGCTGGTA	TCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCTCAGTGGCTGGTATCCCTAC	ARPLSGWYPY	292	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	70	1	0	98.6
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	108	6	0	94.7
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  
                    Query_11064  8    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGAACCTTCAGCAGTT  97
V  94.5% (274/290)  IGHV1-69*01  5    ...................G........................................................C...........C.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  A  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  I  P  M  F  G  T  A  N  Y  A  
                    Query_11064  98   ATGCTATCACGTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGCATCATCCCTATGTTTGGAACAGCCAACTACGCAC  187
V  94.5% (274/290)  IGHV1-69*01  95   .........GC..........................................G.G...........C.....T.....A..........  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  R  D  R  V  T  V  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  K  F  E  D  T  
                    Query_11064  188  AGAAGTTCCGGGACAGAGTCACGGTTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAAATTTGAGGACACGG  277
V  94.5% (274/290)  IGHV1-69*01  185  .........A..G..........A...................................................G..C...........  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><----------CDR3-IMGT--------->                                  
                                      A  V  Y  Y  C  A  R  P  L  S  G  W  Y  P  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_11064  278  CCGTCTATTACTGTGCGAGACCTCTCAGTGGCTGGTATCCCTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  355
V  94.5% (274/290)  IGHV1-69*01  275  ....G...............----------------------------------------------------------  294
                                      A  V  Y  Y  C  A  R                                                           
D  100.0% (12/12)   IGHD6-19*01  9    -------------------------............-----------------------------------------  20
J  97.4% (37/38)    IGHJ4*02     11   ----------------------------------------.........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_2908

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           277     8e-77
IGHD7-27*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GAAC	AACTGGGGA	ATC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGAACAACTGGGGAATCGACTAC	ARNNWGIDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	96	18	0	84.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	212	35	0	85.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  R  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11065  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAGGCACTGGATGCACTGGGTCCGCCAAGCTCCAGGTAAGGGGCTGC  90
V  85.8% (212/247)  IGHV3-74*01  47   ...........................................T..CT...............................G.........G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      L  W  V  A  R  I  D  Y  D  G  G  T  L  D  Y  A  A  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_11065  91   TGTGGGTCGCACGTATTGACTACGATGGGGGTACGCTGGACTATGCGGCCTCCGTGGAGGGACGATTCACCATCTCCAGAGACAACGCCG  180
V  85.8% (212/247)  IGHV3-74*01  137  ........T........A.TAGT......A...GCACAAG...C....A.......A....C...........................A  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      A  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  S  A  V  Y  Y  C  A  R  N  N  W  G  I  D  Y  
                    Query_11065  181  CCAACACGCTCTATCTGCAGATGAATAGTCTAAGAGTCGAGGACTCGGCTGTCTATTATTGCGCAAGGAACAACTGGGGAATCGACTACT  270
V  85.8% (212/247)  IGHV3-74*01  227  AG........G........A.....C.....G....C.......A.......G.....C..T.....-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD7-27*01  3    -----------------------------------------------------------------------.........----------  11
J  100.0% (40/40)   IGHJ4*02     9    -----------------------------------------------------------------------------------.......  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11065  271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (40/40)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_2909

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           307     1e-85
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	232	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	10	1	0	90.9
CDR1-IMGT	19	42	24	21	3	0	87.5
FR2-IMGT	43	93	51	46	5	0	90.2
CDR2-IMGT	94	117	24	21	3	0	87.5
FR3-IMGT	118	231	114	109	5	0	95.6
CDR3-IMGT (germline)	232	239	8	7	1	0	87.5
Total	N/A	N/A	232	214	18	0	92.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  N  N  H  A  L  S  W  L  R  Q  A  P  G  K  G  P  E  W  V  S  A  I  
                    Query_11066  8    GTGCAGTCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGCTCCGCCAGGCTCCAGGGAAGGGGCCGGAGTGGGTCTCAGCGATTA  97
V  92.2% (214/232)  IGHV3-23*01  65   ......C.................G..G.T.....A....C...G........................T...............T....  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      T  G  S  G  S  S  T  Y  Y  S  D  S  A  K  G  R  F  T  I  S  R  D  Y  S  K  N  T  L  Y  L  
                    Query_11066  98   CTGGGAGTGGTAGTAGCACATACTACTCAGACTCCGCGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCAAGAACACGCTGTATCTGC  187
V  92.2% (214/232)  IGHV3-23*01  155  G...T......G..............G.........T............................A........................  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  Y  S  P  L  D  Y  
                    Query_11066  188  AAATGAACAGCCTTAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTACT  277
V  92.2% (214/232)  IGHV3-23*01  245  .............G....................A..............A..--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------..........---------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------------.........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11066  278  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (42/42)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_2902

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            364     5e-103
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	CGTTCGG	ATGGTTCGGGGAGTT	CCTA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGCGTTCGGATGGTTCGGGGAGTTCCTAGGTATGGACGTC	AKAFGWFGEFLGMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  K  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11067  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAAAGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.8% (241/249)  IGHV3-9*01   47   ....................................C....G.T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  R  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11067  91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGGATAGGCTATGCGGATTCTGTGAAGGGCCGATTCACCATCTCAAGAGACAACGCCA  180
V  96.8% (241/249)  IGHV3-9*01   137  ..................................C..............C..........................C.............  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  L  Y  Y  C  A  K  A  F  G  W  F  G  E  
                    Query_11067  181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGCGAGGTGAGGACACGGCCTTGTATTACTGTGCAAAAGCGTTCGGATGGTTCGGGGAGT  270
V  96.8% (241/249)  IGHV3-9*01   227  ................................A...C................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD3-10*01  9    ----------------------------------------------------------------------------..............  22

                                      ---------------->                                 
                                      F  L  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11067  271  TCCTAGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
D  100.0% (15/15)   IGHD3-10*01  23   .-------------------------------------------------  23
J  100.0% (45/45)   IGHJ6*02     18   -----.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_2903

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           367     6e-104
IGHD3-10*01                                                                                           12.2    32    
IGHJ2*01                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCCGACCCTAGTGAATCTTA	ATTATA	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCCGACCCTAGTGAATCTTAATTATAACTGGTACTTCGATCTC	AKPTLVNLNYNWYFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	241	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11068  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.6% (241/247)  IGHV3-23*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  D  R  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11068  91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGATAGAACATTTTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  97.6% (241/247)  IGHV3-23*01  137  ..............................G...C....AC.................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  T  L  V  N  L  N  
                    Query_11068  181  AGAACACGCTGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAAGCCGACCCTAGTGAATCTTAATT  270
V  97.6% (241/247)  IGHV3-23*01  227  ...................A................................A..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-10*01  24   ---------------------------------------------------------------------------------------...  26

                                      T------------------>                                  
                                      Y  N  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11068  271  ATAACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  100.0% (6/6)     IGHD3-10*01  27   ...---------------------------------------------------  29
J  100.0% (51/51)   IGHJ2*01     3    ---...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_2900

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           352     3e-99
IGHD5-18*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGTCATGGTTAC	GGAGGAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGTCATGGTTACGGAGGAATTGACTAC	ARYSHGYGGIDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	234	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11069  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (234/243)  IGHV4-59*01  49   ...............................G........G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  S  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  K  N 
                    Query_11069  91   TGGATTGGTTATATCTACTACCGTGGGAGCTCCAACTCCAACCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAAGAAC  180
V  96.3% (234/243)  IGHV4-59*01  139  ........G........T...A........A......A......................G.............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  I  D 
                    Query_11069  181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGTCATGGTTACGGAGGAATTGAC  270
V  96.3% (234/243)  IGHV4-59*01  229  .............A.................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  86.7% (13/15)    IGHD5-18*01  6    ---------------------------------------------------------------.....CT........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11069  271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_2901

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            327     9e-92
IGHD3-10*01                                                                                           12.2    31   
IGHJ5*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TTAAGGGAAGTA	GTTCGTCGACTTATT	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTAAGGGAAGTAGTTCGTCGACTTATTACTGGTTCGACCCC	VKGSSSSTYYWFDP	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	241	1	1	0	0	100
Total	N/A	N/A	241	225	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  L  V  S  G  G  S  I  T  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11070  1    ACCCTGTCCCTCACCTGCCTTGTCTCTGGTGGGTCCATTACCAGTAGTAACTGGTGGTCTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.4% (225/241)  IGHV4-4*02   49   ..................GC............C.....C.G................AG...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  A  D  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  K 
                    Query_11070  91   GAGTGGATTGCGGATATCTATTATAGTGGGAGCACCAATTACAACCCGTCCCTGAAGAGTCGAGTCACCATCTCATTAGACAAGTCCAAG  180
V  93.4% (225/241)  IGHV4-4*02   139  ..........G...A......C................C..............C.................A...G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  K  G  S  S  S  S  T  Y  Y 
                    Query_11070  181  AACCAGTTCTCCCTGAAACTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGTTAAGGGAAGTAGTTCGTCGACTTATTAC  270
V  93.4% (225/241)  IGHV4-4*02   229  .................G......................................C....-----------------------------  289
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  80.0% (12/15)    IGHD3-10*01  12   -------------------------------------------------------------------------.....GG..G.....--  26
J  93.8% (45/48)    IGHJ5*01     4    ----------------------------------------------------------------------------------------..  5

                                      ----------->                                  
                                       W  F  D  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11070  271  TGGTTCGACCCCTGGGGCCGAGGAACCCTGGTCACTGTCTCCTCAG  316
J  93.8% (45/48)    IGHJ5*01     6    .........T.........A...............C..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_2906

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           350     8e-99
IGHD7-27*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGTATCGACT	CTGGGGA	N/A	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGTATCGACTCTGGGGAACAACTGGTTCGACCCC	ARQVSTLGNNWFDP	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  R  D  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_11071  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTCGTGACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  95.9% (234/244)  IGHV4-59*08  50   .....TCC...A.............................A..T.............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N  
                    Query_11071  94   GGATTGGGTATATCTATTACAGTGGGAACACCTACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAACC  183
V  95.9% (234/244)  IGHV4-59*08  140  ...........................G....A.............................................C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  V  S  T  L  G  N  N  W  
                    Query_11071  184  AGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACAAGTATCGACTCTGGGGAACAACTGGT  273
V  95.9% (234/244)  IGHV4-59*08  230  ..............C.................................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (7/7)     IGHD7-27*01  5    --------------------------------------------------------------------------.......---------  11
J  100.0% (51/51)   IGHJ5*02     1    ---------------------------------------------------------------------------------.........  9

                                      ------->                                  
                                      F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11071  274  TCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (51/51)   IGHJ5*02     10   ..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_2907

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           297     7e-83
IGHD5-12*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATTACATCGAGA	TGGCTAC	AATAGAGGAGTT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATTACATCGAGATGGCTACAATAGAGGAGTTTTTGCCTTC	ARELHRDGYNRGVFAF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	244	217	27	0	88.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  V  R  T  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  Q  
                    Query_11072  2    CCCTGTCCCTCACCTGCGCAGCCTCTGGGTTCACCGTCAGGACCAATTACATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGCAGT  91
V  88.9% (217/244)  IGHV3-53*01  50   .....AGA...T....T.......................T.G...C........C..............................G...  139
                                         L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  V  S  L  I  H  S  G  G  T  T  S  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  K  S  T  N  
                    Query_11072  92   GGGTCTCACTTATTCATAGTGGTGGGACCACGTCCTATTCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAAGTCCACTAACA  181
V  88.9% (217/244)  IGHV3-53*01  140  ........G.....T....C.....T.G...A.A...CG........................................T....AG....  229
                                      W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      T  V  Y  L  Q  M  V  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  L  H  R  D  G  Y  N  R  
                    Query_11072  182  CGGTATATCTTCAAATGGTCAACCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGAATTACATCGAGATGGCTACAATAGAG  271
V  88.9% (217/244)  IGHV3-53*01  230  ..C.G............AA..G..........................................--------------------------  293
                                      T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (7/7)     IGHD5-12*01  11   ----------------------------------------------------------------------------.......-------  17

                                      ------------->                                  
                                      G  V  F  A  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11072  272  GAGTTTTTGCCTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  319
J  93.0% (40/43)    IGHJ4*02     6    -----....A..A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_270776

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           288     5e-80
IGHD3-22*01                                                                                           16.1    2.6  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGCGGCCCGGAACCGAC	AGTAGTGG	CCTCCC	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCGGCCCGGAACCGACAGTAGTGGCCTCCCCAATTGGTTCGACCCC	ARGRPGTDSSGLPNWFDP	287	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	58	12	0	82.9
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	172	27	19	5	3	70.4
FR3-IMGT	173	286	114	94	20	0	82.5
CDR3-IMGT (germline)	287	292	6	6	0	0	100
Total	N/A	N/A	292	240	49	3	82.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  A  V  R  R  S  G  D  S  L  K  I  S  C  K  T  S  G  Y  K  F  S  T  Y
                    Query_11073  1    GCAGCTGGTGCAGTCTGGAGCAGCGGTGAGGAGGTCCGGAGACTCTCTGAAGATCTCTTGTAAGACCTCGGGATACAAGTTCTCCACATA  90
V  82.2% (240/292)  IGHV5-51*01  6    .......................A.....AA.A.C....G..G..............C......GGT..T.......GC..TA...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><--------CDR2-IMGT--------><-------
                                        G  I  A  W  V  R  Q  M  P  G  R  G  L  E  W  A  G  I  I  Y  P  S  D  S  K  N  V  R  Y  N
                    Query_11073  91   CGGGATCGCCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGGCGGGAATCATCTATCCTAGTGACTCAAAGAATGTCAGATATAA  180
V  82.2% (240/292)  IGHV5-51*01  96   .T......G.......................A.............AT...G............G.......---TG..AC......C.G  182
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S     D  T  R  Y  S

                                      ---------------------------------------------FR3-IMGT-------------------------------------
                                        P  S  F  R  G  H  V  T  I  S  V  E  K  A  I  T  T  A  Y  L  E  W  D  S  L  E  T  S  D  S
                    Query_11073  181  TCCGTCCTTCAGAGGCCACGTCACCATTTCCGTCGAGAAGGCCATCACCACCGCCTACCTGGAGTGGGACAGCCTGGAGACCTCGGACAG  270
V  82.2% (240/292)  IGHV5-51*01  183  C.........CA......G........C..A.C...C...T......G.............C.....AG.......A..G.........C  272
                                        P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T

                                      ---------------><----------------------CDR3-IMGT--------------------->                    
                                        G  I  Y  Y  C  A  R  G  R  P  G  T  D  S  S  G  L  P  N  W  F  D  P  W  G  Q  G  T  L  V
                    Query_11073  271  CGGCATCTATTACTGTGCGAGAGGGCGGCCCGGAACCGACAGTAGTGGCCTCCCCAATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  360
V  82.2% (240/292)  IGHV5-51*01  273  ..C...G...............--------------------------------------------------------------------  294
                                        A  M  Y  Y  C  A  R                                                                     
D  100.0% (8/8)     IGHD3-22*01  14   ----------------------------------------........------------------------------------------  21
J  94.0% (47/50)    IGHJ5*02     2    ------------------------------------------------------...C................................  37

                                                    
                                        T  V  A  P  
                    Query_11073  361  CACCGTCGCCCCAG  374
J  94.0% (47/50)    IGHJ5*02     38   .......T..T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_2905

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           380     1e-107
IGHD3-16*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACAAGCGGGCGGCACC	TTTGGGG	CGAGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTAC	ARGQAGGTFGASDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  S  F  N  D  Y 
                    Query_11074  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAATGAAGGTCTCCTGCAAGGCTTCCGGTTACAGCTTTAACGACTAT  91
V  92.0% (266/289)  IGHV1-18*01  7    .............................................G......................T.......C.....C.AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  M  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  A  Y  N  G  N  T  K  Y  S  E 
                    Query_11074  92   GGTATCACTTGGATGCGACAGGCCCCTGGACAGGGGCCTGAGTGGATGGGATGGATCAGCGCATATAATGGTAACACAAAGTATTCAGAG  181
V  92.0% (266/289)  IGHV1-18*01  97   .......GC...G...................A....T........................T..C..............C...G..C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  L  Q  G  R  L  I  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_11074  182  AGGCTCCAGGGCAGACTCATCATGACCACAGACACATCCACGAGCACAGCCTACATGGAATTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.0% (266/289)  IGHV1-18*01  187  .A.............G...C.......................................GC.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  G  Q  A  G  G  T  F  G  A  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11074  272  GTCTATTATTGTGCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  92.0% (266/289)  IGHV1-18*01  277  ..G.....C..........---------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD3-16*01  15   ------------------------------------.......---------------------------------------------  21
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_223254

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           396     2e-112
IGHD6-6*01                                                                                            18.0    0.64  
IGHJ3*01                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-6*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGAC	TATAGCAGGTCG	ATTG	GATGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACTATAGCAGGTCGATTGGATGTTTTTGATGTC	AKTIAGRLDVFDV	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	270	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  T  K  P  G  S  S  V  K  V  S  C  K  T  S  G  G  T  F  S  S  Y
                    Query_11075  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGACGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACTTCTGGCGGCACCTTCAGCAGCTA  90
V  94.1% (270/287)  IGHV1-69*01  6    ..................G..........A..................................G.......A.................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  G  P  G  Q  G  L  E  W  M  G  G  I  I  P  T  F  G  S  A  N  Y  A  Q
                    Query_11075  91   TGCTATCAGCTGGGTGCGACAGGGCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCAACCTTTGGTTCAGCAAACTACGCACA  180
V  94.1% (270/287)  IGHV1-69*01  96   .......................C.......................................T.T.......A................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  R  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  D  L  R  S  L  G  S  D  D  T  A
                    Query_11075  181  GAACTTCCGGGGCAGAGTCACAATTACCGCGGACGAATCCACGAGCACAGCGTACATGGACCTGCGCAGCCTGGGATCTGACGACACGGC  270
V  94.1% (270/287)  IGHV1-69*01  186  ...G....A............G.............................C........G...A........A.......G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  F  C  A  K  T  I  A  G  R  L  D  V  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11075  271  CGTGTATTTCTGTGCGAAGACTATAGCAGGTCGATTGGATGTTTTTGATGTCTGGGGCCAGGGGACCATGGTCACCGTCTCTTCAG  356
V  94.1% (270/287)  IGHV1-69*01  276  ........A........---------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                       
D  91.7% (11/12)    IGHD6-6*01   4    ---------------------........C...-----------------------------------------------------  15
J  93.9% (46/49)    IGHJ3*01     2    -------------------------------------....C..................A.....A...................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_349979

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           347     7e-98
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGTCCCTC	ACGGTGAC	CTAGATT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGACGTCCCTCACGGTGACCTAGATTCC	ARDVPHGDLDS	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  S  T  F  S  S  F  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11076  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATCCACCTTCAGTAGCTTCTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-74*01  47   .................................T..............A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  I  T  V  D  G  S  G  T  V  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11076  91   AGTGGGTCTCACGCATTACTGTTGATGGCAGTGGCACAGTCTATGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-74*01  137  T............T....A.AG......G...A.....AG...C..............................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  V  P  H  G  D  L  
                    Query_11076  181  AGAACACGTTGTATCTGCAAATGAACAGTCTGAGAGCCGACGACACGGCTGTGTATTACTGTGCAAGAGACGTCCCTCACGGTGACCTAG  270
V  94.4% (236/250)  IGHV3-74*01  227  ........C...............................G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD4-17*01  6    ------------------------------------------------------------------------------........----  13

                                      ---->                                  
                                      D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11076  271  ATTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (36/36)   IGHJ5*02     16   ---....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_54489

Length=416
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*14                                                                                           405     4e-115
IGHD3-9*01                                                                                            31.5    6e-05 
IGHJ6*03                                                                                              75.7    7e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*14	IGHD3-9*01	IGHJ6*03	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGAAA	TACGATATTTTGACTG	ACTCGTACGCAAGTACATAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGAAATACGATATTTTGACTGACTCGTACGCAAGTACATATTACTACTTCTCCATGGACGTC	ARGKYDILTDSYASTYYYFSMDV	290	358	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	73	2	0	97.3
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	294	5	5	0	0	100
Total	N/A	N/A	293	276	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  M  K  V  S  C  K  A  S  G  D  T  F  N 
                    Query_11077  2    CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGATGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAAC  91
V  94.2% (276/293)  IGHV1-69*14  1    ...........G.......................................G...........................G........G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       F  F  A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  H  Y 
                    Query_11077  92   TTCTTTGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGAACAACACACTAC  181
V  94.2% (276/293)  IGHV1-69*14  91   AG..A........G...............................................................T...G..A.....  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  F  T  A  D  K  S  T  S  T  A  Y  M  D  L  S  S  L  R  S  E  D 
                    Query_11077  182  GCACAGAAGTTCCAGGGCAGAGTCACATTTACCGCGGACAAATCCACGAGCACAGCCTACATGGACCTGAGCAGCCTGAGATCTGAGGAC  271
V  94.2% (276/293)  IGHV1-69*14  181  ..........................GA.....................................G........................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------------------CDR3-IMGT----------------------------->   
                                       A  S  V  Y  C  C  A  R  G  K  Y  D  I  L  T  D  S  Y  A  S  T  Y  Y  Y  F  S  M  D  V  W 
                    Query_11077  272  GCGTCCGTGTATTGCTGTGCGAGGGGGAAATACGATATTTTGACTGACTCGTACGCAAGTACATATTACTACTTCTCCATGGACGTCTGG  361
V  94.2% (276/293)  IGHV1-69*14  271  A..G.........A.........-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (16/16)   IGHD3-9*01   5    ------------------------------................--------------------------------------------  20
J  90.7% (49/54)    IGHJ6*03     9    ------------------------------------------------------------------.......A..A.............  32

                                                                    
                                       G  Q  G  S  A  V  T  V  S  S 
                    Query_11077  362  GGCCAAGGGTCCGCGGTCACCGTCTCCTCA  391
J  90.7% (49/54)    IGHJ6*03     33   ...A.....A..A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40814496


Query= Query_349974

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*14                                                                                           430     1e-122
IGHD1-26*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*14	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCG	AGTGGGAGCTACT	TGGGGCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTAC	ARDLEWELLGAFDY	290	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	285	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  
                    Query_11078  3    AGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCA  92
V  96.6% (285/295)  IGHV1-69*14  2    .............G........G...................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      R  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  S  F  G  T  A  H  Y  
                    Query_11078  93   GATATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTAGCTTTGGAACAGCACACTACG  182
V  96.6% (285/295)  IGHV1-69*14  92   .C...................................................................T......T......A......  181
                                      S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  R  F  Q  G  R  V  T  I  T  A  D  R  S  T  S  T  A  Y  M  E  L  S  S  L  S  S  E  D  
                    Query_11078  183  CACAGAGATTCCAGGGCAGAGTCACGATTACCGCGGACAGATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGCTCTGAGGACA  272
V  96.6% (285/295)  IGHV1-69*14  182  ......AG...............................A.......................................A..........  271
                                      A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  V  Y  Y  C  A  R  D  L  E  W  E  L  L  G  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_11078  273  CGGCCGTGTATTACTGTGCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  362
V  96.6% (285/295)  IGHV1-69*14  272  .........................-----------------------------------------------------------------  296
                                      T  A  V  Y  Y  C  A  R                                                                    
D  100.0% (13/13)   IGHD1-26*01  6    ------------------------------.............-----------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     6    --------------------------------------------------........................................  45

                                         
                                      S  
                    Query_11078  363  CAG  365
J  100.0% (43/43)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_54488

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            391     6e-111
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_11079  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.1% (270/290)  IGHV1-8*02   6    ..................G..........................................................C.....C......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_11079  91   TGATATCACCTGGGTGCGACAGGCCACTGGGCAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.1% (270/290)  IGHV1-8*02   96   ........A.....................A...................................C.......................  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_11079  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.1% (270/290)  IGHV1-8*02   186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11079  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.1% (270/290)  IGHV1-8*02   276  ...G................---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01   9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_349971

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           347     7e-98
IGHD3-3*01                                                                                            10.3    122  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTCTTC	TTTTT	CTCCAAGAGAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTCTTCTTTTTCTCCAAGAGAGAGTCTACTACTTTGACTAC	ARSLLFLQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  K  S  G  G  Y  Y  W  S  W  V  R  Q  H  P  G  K  G 
                    Query_11080  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAAGAGTGGTGGCTACTACTGGAGCTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (235/248)  IGHV4-31*03  49   ..................................C.....GC........T...............A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  A  T  S 
                    Query_11080  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGCCACGTCT  180
V  94.8% (235/248)  IGHV4-31*03  139  ..................................G.............C......................C........A.A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  S  L  L  F  L  Q  E 
                    Query_11080  181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACTGTCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTCTTCTTTTTCTCCAAGAG  270
V  94.8% (235/248)  IGHV4-31*03  229  .....................C....C..........C..............................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD3-3*01   10   ----------------------------------------------------------------------------.....---------  14

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11080  271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_349970

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         299     2e-83
IGHD3-10*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGCTCGGC	GGTTCGGGGAGTTA	CC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTCGGCGGTTCGGGGAGTTACCACTAC	ARGLGGSGSYHY	235	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	19	21	3	3	0	0	100
CDR1-IMGT	22	45	24	21	3	0	87.5
FR2-IMGT	46	96	51	49	2	0	96.1
CDR2-IMGT	97	120	24	22	2	0	91.7
FR3-IMGT	121	234	114	106	8	0	93
CDR3-IMGT (germline)	235	239	5	5	0	0	100
Total	N/A	N/A	221	206	15	0	93.2


Alignments

                                        <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                         S  G  V  A  F  S  S  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  S  H  D 
                    Query_11081    19   TCTGGAGTCGCCTTCAGCAGCTATGCTATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCACTTATATCACATGAT  108
V  93.2% (206/221)  IGHV3-30-3*01  73   ......T..A.......T...........G.............................................G........T.....  162
                                         S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D 

                                        -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                         G  S  S  K  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  V  Y  L  Q  M  N 
                    Query_11081    109  GGAAGCAGTAAATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGGTATATCTACAGATGAAC  198
V  93.2% (206/221)  IGHV3-30-3*01  163  .......A........A.......................................................C.G.....G..A......  252
                                         G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                        -----------------------------------><-------------CDR3-IMGT------------>                  
                                         S  L  R  N  E  D  T  A  V  Y  Y  C  A  R  G  L  G  G  S  G  S  Y  H  Y  W  G  Q  G  T  L 
                    Query_11081    199  AGCCTGAGAAATGAGGACACGGCTGTTTATTACTGTGCGAGGGGGCTCGGCGGTTCGGGGAGTTACCACTACTGGGGCCAGGGAACCCTG  288
V  93.2% (206/221)  IGHV3-30-3*01  253  .........GC...............G..............-------------------------------------------------  293
                                         S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                    
D  100.0% (14/14)   IGHD3-10*01    11   ---------------------------------------------------..............-------------------------  24
J  97.3% (36/37)    IGHJ4*02       10   -------------------------------------------------------------------.......................  32

                                                      
                                         V  A  V  S  S
                    Query_11081    289  GTCGCCGTCTCCTC  302
J  97.3% (36/37)    IGHJ4*02       33   ...A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_349973

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           277     9e-77
IGHD4-17*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCG	TACGGTGAC	CCTACACTCCCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCGTACGGTGACCCTACACTCCCATACTTTGACTCT	ARAYGDPTLPYFDS	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	22	8	0	73.3
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	99	15	0	86.8
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	212	35	0	85.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  D  S  M  S  S  G  G  Y  L  W  S  *  I  R  Q  N  P  G  K  G  
                    Query_11082  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCTATGAGCAGTGGCGGCTATCTCTGGAGCTGAATCCGCCAAAACCCAGGGAAGGGCC  93
V  85.8% (212/247)  IGHV4-31*03  50   .....TCC...A..................G...C..C........T..T..CTA.........G........GC...............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  Y  S  G  T  S  Y  Y  S  P  S  L  K  R  R  L  T  I  S  V  G  T  S  
                    Query_11082  94   TGGAGTGGATTGGGAGCATCTATTACAGTGGAACCTCCTACTACAGCCCGTCCCTCAAGAGGCGACTTACAATATCAGTAGGCACTTCTG  183
V  85.8% (212/247)  IGHV4-31*03  140  ..............TA...............G.G.A.........A...............T...G....C..........A...G...A  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      E  K  H  F  S  L  K  L  T  S  M  T  A  A  D  T  A  I  Y  F  C  A  R  A  Y  G  D  P  T  L  
                    Query_11082  184  AGAAGCACTTCTCCCTGAAGCTGACCTCTATGACTGCCGCGGACACGGCCATATATTTTTGTGCGAGGGCGTACGGTGACCCTACACTCC  273
V  85.8% (212/247)  IGHV4-31*03  230  ....C..G................G....G....................G.G....AC........-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD4-17*01  5    -----------------------------------------------------------------------.........----------  13

                                      ------------->                                  
                                      P  Y  F  D  S  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_11082  274  CATACTTTGACTCTTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  321
J  93.5% (43/46)    IGHJ4*02     3    --..........AC.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_349972

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           380     1e-107
IGHD1-26*01                                                                                           12.2    31    
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATAT	GTGGGA	AGGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATATGTGGGAAGGTACTACTTTGACTAC	AREYVGRYYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	247	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_11083  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTAGTTACTACTGGAGCTGGATCAGGCAGCCCCCAGGGAAGGGA  90
V  98.4% (247/251)  IGHV4-61*01  49   .....................................................................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  N  G  Y  I  Y  Y  S  G  Y  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11083  91   CTGGAGTGGAATGGGTATATCTATTACAGTGGGTACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  98.4% (247/251)  IGHV4-61*01  139  ..........T......................AG.......................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  Y  V  G  R  Y  Y 
                    Query_11083  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAATATGTGGGAAGGTACTAC  270
V  98.4% (247/251)  IGHV4-61*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-26*01  7    ---------------------------------------------------------------------------......---------  12
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_11083  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    ..............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_54487

Length=314
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         366     1e-103
IGHD5-12*01                                                                                           10.3    110   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	GTGGC	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGCGGCCTAC	ARVAAY	241	258	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	111	3	0	97.4
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	240	6	0	97.6


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  V  R  Q  P  P  G  K  G  L 
                    Query_11084    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCATCAGCAGTGGTTACTACTGGGGCTGGGTCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  97.6% (240/246)  IGHV4-38-2*01  49   ...............................................................A..........................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  I  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S  K 
                    Query_11084    91   GAGTGGATTGGGATTATCTACCATAGTGGGAGCACCTACTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTAGACACGTCCAAG  180
V  97.6% (240/246)  IGHV4-38-2*01  139  .............G......T...................................G.................................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----CDR3-IMGT--->            
                                         N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  A  A  Y  W  G  Q  G 
                    Query_11084    181  AACCAGTTCTCCCTGAAGCTGAACTCTGTTACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGTGGCGGCCTACTGGGGCCAGGGA  270
V  97.6% (240/246)  IGHV4-38-2*01  229  ......................G......G....................................------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (5/5)     IGHD5-12*01    10   ------------------------------------------------------------------.....-------------------  14
J  97.4% (37/38)    IGHJ4*02       11   --------------------------------------------------------------------------................  26

                                                              
                                         I  L  V  T  V  S  S  
                    Query_11084    271  ATCCTGGTCACCGTCTCCTCAG  292
J  97.4% (37/38)    IGHJ4*02       27   .C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30304617


Query= Query_107381

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           338     5e-95
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	230	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_11085  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.3% (230/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11085  91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCC  180
V  94.3% (230/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C.................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_11085  181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  94.3% (230/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11085  271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_107386

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           330     1e-92
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  A  L  E 
                    Query_11086  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGCACTGGAG  90
V  93.1% (228/245)  IGHV4-59*08  49   ...........................................G......................................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  F  Y  T  G  T  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11086  91   TGGATCGGGTCTATCTTTTACACTGGGACCACCAACTACGACCCCTCTCTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGAAC  180
V  93.1% (228/245)  IGHV4-59*08  139  .....T....A.....A.....G.....G..........A.......C....................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  V  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  H  R  A  A  A  G  P 
                    Query_11086  181  CAGTTCTCCCTGAGAGTGACCTCTCTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATCCCCATAGAGCAGCAGCTGGCCCC  270
V  93.1% (228/245)  IGHV4-59*08  229  .............AGC...G....G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD6-13*01  7    --------------------------------------------------------------------------............----  18
J  93.2% (41/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_11086  271  TTTGACAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  313
J  93.2% (41/44)    IGHJ4*02     6    ......T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_107387

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_11087  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_11087  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_11087  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_11087  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_107384

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGAGGTTGTTGGTGTCC	TTCGGGGAGTTATT	TCCCCTTACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGAGGTTGTTGGTGTCCTTCGGGGAGTTATTTCCCCTTACCCCTTTGACTAC	AKDEVVGVLRGVISPYPFDY	237	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	122	24	13	5	6	54.2
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	250	230	14	6	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11088  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCGACTACGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  92.0% (230/250)  IGHV3-23*01  47   ............................................AG...T...................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  G  I  S        N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11088  91   AGTGGGTCTCAGCTATTGGAATTAGT------AACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  174
V  92.0% (230/250)  IGHV3-23*01  137  .................A.TGG....GGTGGT.G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  E  M  E  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  E  V  V  G  V  L  
                    Query_11088  175  AGAACACTCTGTATCTGGAAATGGAGAGCCTGAGAGCCGAGGACACGGCCCTATATTACTGTGCGAAAGATGAGGTTGTTGGTGTCCTTC  264
V  92.0% (230/250)  IGHV3-23*01  227  .......G.........C.....A.C........................G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (14/14)   IGHD3-10*01  13   ---------------------------------------------------------------------------------------...  15

                                      R3-IMGT------------------------>                                  
                                      R  G  V  I  S  P  Y  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11088  265  GGGGAGTTATTTCCCCTTACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (14/14)   IGHD3-10*01  16   ...........-------------------------------------------------------  26
J  100.0% (44/44)   IGHJ4*02     5    ----------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_107385

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           300     8e-84
IGHD1-1*01                                                                                            14.1    8.3  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTACCCTA	AACTGGGACG	GACCTTCTGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTACCCTAAACTGGGACGGACCTTCTGCTTTTGACCAC	ARLTLNWDGPSAFDH	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	217	25	0	89.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  S  G  D  P  M  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E  
                    Query_11089  4    CCCTGAGACTCTCCTGTGCTGTCTCCGGTGACCCCATGACTAGTTATTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGAGACTGGAGT  93
V  89.7% (217/242)  IGHV4-59*01  50   .....TCC...A....CA.......T....G.T....C.G......C........C........................G.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  L  S  I  D  T  S  K  N  
                    Query_11089  94   GGATTGGATATATCTACTACAGTGGGAGCACCAACTACAACCCTTCCCTCAGGAGTCGAGTCACCTTATCGATAGACACGTCCAAGAACC  183
V  89.7% (217/242)  IGHV4-59*01  140  .......G........T..........................C.......A.............A....AG..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      H  F  S  L  S  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  T  L  N  W  D  G  P  S  
                    Query_11089  184  ACTTCTCCCTGAGCCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGACTTACCCTAAACTGGGACGGACCTTCTG  273
V  89.7% (217/242)  IGHV4-59*01  230  .G..........AG................................G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  90.0% (9/10)     IGHD1-1*01   6    -----------------------------------------------------------------------......A...---------  15

                                      ---------->                                  
                                      A  F  D  H  W  G  R  G  T  L  V  A  V  S  S  
                    Query_11089  274  CTTTTGACCACTGGGGCCGGGGAACCCTGGTCGCCGTCTCCTCAG  318
J  93.0% (40/43)    IGHJ4*02     6    --......T.........A.............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_233865

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            382     3e-108
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11090  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  G  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_11090  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGGCTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  98.8% (247/250)  IGHV3-7*01   137  ................................................A.................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_11090  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  98.8% (247/250)  IGHV3-7*01   227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11090  271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_19610

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           341     5e-96
IGHD3-10*01                                                                                           10.3    116  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TA	GTTCG	AGGT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGTTCGAGGTTACTACGGCATGGACGTC	ARVVRGYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11091  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGTAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (231/244)  IGHV4-59*01  49   ..................A...........................A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  F  T  G  N  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  D 
                    Query_11091  91   TGGATTGGATATATTTATTTCACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGCCACCATATCAGTAGACACGTCCAAGGAC  180
V  94.7% (231/244)  IGHV4-59*01  139  ........G.....C....A..G.....G................................T.........................A..  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  V  R  G  Y  Y  G  M  D 
                    Query_11091  181  CAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCAGCGGACACGGCCGTGTATTATTGTGCGAGAGTAGTTCGAGGTTACTACGGCATGGAC  270
V  94.7% (231/244)  IGHV4-59*01  229  .............A......C...........T....................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-10*01  12   ------------------------------------------------------------------.....-------------------  16
J  96.1% (49/51)    IGHJ6*02     12   ---------------------------------------------------------------------------........T......  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_11091  271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  96.1% (49/51)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_19613

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           391     5e-111
IGHD2-2*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCACGG	TGTAGTAGTACCAGCTGC	CCTCCT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCACGGTGTAGTAGTACCAGCTGCCCTCCTTATGGACGTC	AKDHGVVVPAALLMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	250	0	0	100


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                     Query_11092  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  100.0% (250/250)  IGHV3-30*18  47   ..........................................................................................  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                     Query_11092  91   AGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  100.0% (250/250)  IGHV3-30*18  137  ..........................................................................................  226
                                       E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                       K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  H  G  V  V  V  P  
                     Query_11092  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATCACGGTGTAGTAGTACCAG  270
V  100.0% (250/250)  IGHV3-30*18  227  ......................................................................--------------------  296
                                       K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (18/18)    IGHD2-2*01   8    ----------------------------------------------------------------------------..............  21

                                       T------------------>                                 
                                       A  A  L  L  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                     Query_11092  271  CTGCCCTCCTTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
D  100.0% (18/18)    IGHD2-2*01   22   ....-------------------------------------------------  25
J  100.0% (43/43)    IGHJ6*02     20   ----------...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_107389

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           282     4e-78
IGHD3-10*01                                                                                           12.2    32   
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGC	AGTTAATAT	GAACGGACGCTACG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGCAGTTAATATGAACGGACGCTACGACTGGTTCGACCCC	ARDAVNMNGRYDWFDP	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  N  I  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11093  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCAATTTTAACATTTATGCCATGAACTGGGTCCGCCAGGCACCAGGGAAGGGGCTGG  90
V  86.0% (215/250)  IGHV3-23*01  47   ....................G...............CC....G..GC..........G...............T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  G  G  G  P  D  D  I  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11093  91   AGTGGGTCTCAGCTATTGGTGGCGGTCCTGATGACATCTTCTACGCGGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  86.0% (215/250)  IGHV3-23*01  137  .................A....TA..GG..G.AG..CA.A......A...........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  V  Y  L  Q  I  N  S  L  R  Y  E  D  T  A  I  Y  F  C  A  R  D  A  V  N  M  N  G  
                    Query_11093  181  AGAGTACAGTTTACTTGCAAATTAACAGCCTGAGATACGAAGACACGGCCATTTATTTCTGTGCGAGAGATGCAGTTAATATGAACGGAC  270
V  86.0% (215/250)  IGHV3-23*01  227  ...AC..GC.G..TC.......G............GC...G.........G.A....A........A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.9% (8/9)      IGHD3-10*01  20   -------------------------------------------------------------------------.....T...--------  28

                                      T------------------>                                  
                                      R  Y  D  W  F  D  P  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_11093  271  GCTACGACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCTCTGTCTCCTCAG  324
J  93.8% (45/48)    IGHJ5*02     4    ------.........................A.........A.C..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_19615

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           338     5e-95
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	230	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_11094  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.3% (230/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11094  91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCC  180
V  94.3% (230/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C.................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_11094  181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  94.3% (230/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11094  271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_19614

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-20*01                                                                                           347     7e-98
IGHD3-10*01                                                                                           10.3    116  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-20*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TGAGGTC	GAGTT	C	GCTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATGAGGTCGAGTTCGCTCTTGATATC	ARDEVEFALDI	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  S  S  G  F  T  F  S  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11095  1    GGTCCCTGAGACTCTCCTGTGCAAGCTCCGGATTCACCTTTAGCGATTATGGCATGAGTTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-20*01  47   .......................GC...T............GAT..............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  N  G  V  N  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11095  91   AGTGGGTCTCTGGTATTAATTGGAATGGAGTTAATACAGGTTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-20*01  137  ............................T.G..GC.......................................................  226
                                      E  W  V  S  G  I  N  W  N  G  G  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  T  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  E  V  E  F  A  L  
                    Query_11095  181  AGAACTCCCTGTATCTGCAAATGACCAGTCTGAGAGCCGAGGACACGGCCTTGTATTACTGTGCGAGGGATGAGGTCGAGTTCGCTCTTG  270
V  94.4% (236/250)  IGHV3-20*01  227  ........................A...............................C..........A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  19   -----------------------------------------------------------------------------.....--------  23
J  93.3% (42/45)    IGHJ3*02     5    -----------------------------------------------------------------------------------...T...  11

                                      ---->                                 
                                      D  I  W  G  Q  G  T  K  V  T  V  S  S 
                    Query_11095  271  ATATCTGGGGCCAAGGGACAAAGGTCACCGTCTCCTCA  308
J  93.3% (42/45)    IGHJ3*02     12   .....................T............T...  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_19617

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           336     1e-94
IGHD3-10*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCACTC	CTATGGATCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTCCTATGGATCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_11096  4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  93.2% (232/249)  IGHV4-31*03  50   .....TCC...A.....A...........GG.......A...................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  
                    Query_11096  94   TGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTGGACACGTCTA  183
V  93.2% (232/249)  IGHV4-31*03  140  .................................G.................................T.....A.....A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  G  H  S  Y  G  S  G  
                    Query_11096  184  AGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTTTTACTGCGCGAGAGGTCACTCCTATGGATCGGGGA  273
V  93.2% (232/249)  IGHV4-31*03  230  ....................C...G...........................G.A......T.......---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  95.5% (21/22)    IGHD3-10*01  7    ----------------------------------------------------------------------------......T.......  20

                                      ---------------->                                  
                                      S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11096  274  GTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  95.5% (21/22)    IGHD3-10*01  21   ........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ---------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_19616

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            300     8e-84
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTTCTTCCCGGGGTCGC	TTGGGG	N/A	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTTCTTCCCGGGGTCGCTTGGGGCTAT	ARDVLPGVAWGY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  S  Y  W  M  N  W  V  R  Q  G  P  G  R  G  L  
                    Query_11097  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACTTCCTATTGGATGAACTGGGTCCGCCAGGGTCCAGGGAGGGGGCTGG  90
V  88.4% (221/250)  IGHV3-7*03   47   ..........................................G.AG...........G..............C........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  S  E  H  G  G  E  E  R  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_11097  91   AGTGGGTGGCCGCCATAAGCGAACATGGAGGTGAAGAGAGGTATGTGGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  88.4% (221/250)  IGHV3-7*03   137  ...........AA.....AGC..G.....A....GA.ATAC...........T....A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  H  M  N  N  L  R  A  E  D  T  A  T  Y  Y  C  A  R  D  V  L  P  G  V  A  
                    Query_11097  181  AGAATTCATTGTATCTGCACATGAACAACTTGAGAGCCGAGGACACGGCCACATATTACTGTGCGAGAGATGTTCTTCCCGGGGTCGCTT  270
V  88.4% (221/250)  IGHV3-7*03   227  ....C...C..........A.......G.C....................GTG.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  16   ----------------------------------------------------------------------------------------..  17

                                      ------->                                  
                                      W  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11097  271  GGGGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
D  100.0% (6/6)     IGHD3-16*01  18   ....--------------------------------------  21
J  97.4% (37/38)    IGHJ4*02     11   ----...C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_106473

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*03                                                                                           313     1e-87
IGHD1-26*01                                                                                           12.2    31   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CG	AGTGGG	GATCTAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGACGAGTGGGGATCTAGTGACTAC	TRDEWGSSDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  G  S  Y  W  M  H  W  V  R  Q  A  A  R  K  G  L  
                    Query_11098  1    GGTCCCTGAGACTCTCCTGTGTGGCCTCTGGATTCACCTTCGGTAGTTACTGGATGCACTGGGTCCGCCAAGCTGCGAGGAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-74*03  47   .....................CA..................A....C...........................C.AG............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  I  N  P  N  G  G  T  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  V  
                    Query_11098  91   AGTGGGTCTCACGAATTAATCCTAATGGGGGCACTACATCTTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGTCA  180
V  90.0% (225/250)  IGHV3-74*03  137  T............T......AG.G.....A.T.GC...A.G..............................................C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  D  E  W  G  S  S  D  
                    Query_11098  181  AGAACACACTGTATTTGCAGATGGACAGTCTGAGAGCCGAGGACACGGCTGTGTATTATTGTACAAGAGACGAGTGGGGATCTAGTGACT  270
V  90.0% (225/250)  IGHV3-74*03  227  .......G......C....A...A..................................C...G.......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-26*01  6    ------------------------------------------------------------------------......------------  11
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_11098  271  ACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   ..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_106472

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         313     2e-87
IGHD3-3*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTAATCTT	TTACGATTTTTCGACTGGCTAT	CGTCGAAA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCTTAATCTTTTACGATTTTTCGACTGGCTATCGTCGAAAGGTATGGACGTC	VRDLNLLRFFDWLSSKGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	225	25	0	90


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  A  M  H  W  V  R  Q  A  T  G  K  G  L  
                    Query_11099    1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACGTTTAGTAACTATGCCATGCACTGGGTCCGCCAGGCTACAGGCAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-30-3*01  47   .....................C...............C..C....G......T.....................C...............  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  S  V  I  S  Y  D  G  T  T  K  Y  Y  A  S  S  V  K  G  R  F  T  N  S  R  D  N  S  
                    Query_11099    91   AGTGGGTGTCAGTAATTTCATATGATGGAACCACTAAGTACTACGCAAGCTCCGTGAAGGGCCGATTCACCAACTCCAGAGACAATTCCA  180
V  90.0% (225/250)  IGHV3-30-3*01  137  ........G....T..A.............G..A...A.........GA.......................T.................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------------CD
                                        K  N  T  L  Y  L  Q  V  S  S  L  T  P  E  D  T  A  V  Y  F  C  V  R  D  L  N  L  L  R  F  
                    Query_11099    181  AGAATACCCTGTATCTGCAAGTGAGCAGCCTGACACCCGAGGACACGGCTGTGTACTTCTGTGTGAGAGATCTTAATCTTTTACGATTTT  270
V  90.0% (225/250)  IGHV3-30-3*01  227  ....C..G............A...A........G.G.T.................T.A.....C......--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.4% (19/22)    IGHD3-3*01     4    --------------------------------------------------------------------------------..........  13

                                        R3-IMGT------------------------>                                 
                                        F  D  W  L  S  S  K  G  M  D  V  W  G  Q  G  T  A  V  I  V  S  S 
                    Query_11099    271  TCGACTGGCTATCGTCGAAAGGTATGGACGTCTGGGGCCAAGGGACCGCAGTCATCGTCTCCTCA  335
D  86.4% (19/22)    IGHD3-3*01     14   .G..G...T...-----------------------------------------------------  25
J  93.3% (42/45)    IGHJ6*02       18   --------------------...........................A.G....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_106471

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*02                                                                                            327     1e-91
IGHD6-13*01                                                                                           19.9    0.17 
IGHJ2*01                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*02	IGHD6-13*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	GCAGCAGCTG	CTGGCCAATACTTGC	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGCAGCAGCTGCTGGCCAATACTTGCGGTACTTCGATCTC	AREAAAAGQYLRYFDL	281	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	166	24	18	3	3	75
FR3-IMGT	167	280	114	96	18	0	84.2
CDR3-IMGT (germline)	281	288	8	8	0	0	100
Total	N/A	N/A	291	252	36	3	86.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  G  K  P  G  A  S  V  K  V  S  C  E  S  S  G  Y  S  F  S  D  H
                    Query_11100  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGGGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCGAGTCTTCTGGATACAGCTTCTCCGACCA  90
V  86.6% (252/291)  IGHV1-2*02   6    ..................G.........AA...............................A..G............C....A...G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  T  H  W  V  R  Q  A  P  G  Q  G  P  E  W  M  A  W  I  N  P     G  G  V  T  K  Y  A  Q
                    Query_11100  91   CTTTACACACTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGCTTGGATCAACCC---CGGGGGTGTCACAAAATATGCACA  177
V  86.6% (252/291)  IGHV1-2*02   96   ..A..TG...............................T...........GA...........TAA.A.T....G......C........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  V  P  R  D  T  S  L  S  S  A  Y  M  E  L  S  K  L  T  S  Y  A  T  A
                    Query_11100  178  GAAGTTTCAGGGGCGGGTCACCGTGCCCAGGGACACATCCCTCAGTTCAGCCTACATGGAGCTGTCGAAACTGACATCTTACGCCACGGC  267
V  86.6% (252/291)  IGHV1-2*02   186  ............CA........A..A..........G...A....CA.................AGC.GG....G....G...A......  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  F  C  A  R  E  A  A  A  A  G  Q  Y  L  R  Y  F  D  L  W  G  R  G  T  L  V  T  V  S
                    Query_11100  268  CGTGTATTTCTGTGCGAGAGAGGCAGCAGCTGCTGGCCAATACTTGCGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTC  357
V  86.6% (252/291)  IGHV1-2*02   276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD6-13*01  8    ----------------------..........----------------------------------------------------------  17
J  100.0% (48/48)   IGHJ2*01     6    -----------------------------------------------...........................................  48

                                           
                                        S  
                    Query_11100  358  CTCAG  362
J  100.0% (48/48)   IGHJ2*01     49   .....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_169305

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           347     7e-98
IGHD3-3*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CAAA	ATTGCGGTTTTTGGAACGGTTATTA	AT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAATTGCGGTTTTTGGAACGGTTATTAATTACTACGGTATGGACGTC	AKIAVFGTVINYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	233	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  D  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11101  1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCACCTTCAGTAGTCATGATATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.5% (233/244)  IGHV3-48*03  47   ......................A........................T....A.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  T  
                    Query_11101  91   AGTGGGTTTCACTCATTAGTAGTAGTGGCAGCACCATATACTACGCAGACTCTGTGAAGGGCCGATTCAGCATCTCCAGAGACAACACCA  180
V  95.5% (233/244)  IGHV3-48*03  137  ...........TA...............T..T.....................................C................G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  K  S  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  I  A  V  F  G  T  V  
                    Query_11101  181  AGAAGTCACTGTATCTGCAAATGAGCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCCAAAATTGCGGTTTTTGGAACGGTTA  270
V  95.5% (233/244)  IGHV3-48*03  227  ....C...................A.......................................--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  84.0% (21/25)    IGHD3-3*01   3    --------------------------------------------------------------------...A..A........GT.....  24

                                      GT-------------------->                                 
                                      I  N  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11101  271  TTAATTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
D  84.0% (21/25)    IGHD3-3*01   25   ...-----------------------------------------------------  27
J  100.0% (51/51)   IGHJ6*02     12   -----...................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_106477

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD3-10*01                                                                                           12.2    31   
IGHJ5*02                                                                                              48.8    7e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATTTAATACCCCCTGGGCC	TCGGGG	TTTTGAG	CCCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAATACCCCCTGGGCCTCGGGGTTTTGAGCCC	AGHLIPPGPRGFEP	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11102  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01   49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_11102  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01   139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  I  P  P  G  P  R 
                    Query_11102  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAATACCCCCTGGGCCTCGG  270
V  87.4% (215/246)  IGHV4-4*01   229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  E  P  W  G  Q  G  P  L  I  P  F  S  S  
                    Query_11102  271  GGTTTTGAGCCCTGGGGCCAGGGACCCCTGATCCCCTTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  89.2% (33/37)    IGHJ5*02     15   ---------...............A.....G..A..G.........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_106476

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD1-1*01                                                                                            14.1    8.7  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCCTAGGACCGGATAAAGAC	ACAACTG	AGGACGCCCTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCTAGGACCGGATAAAGACACAACTGAGGACGCCCTTTACTTTGACTCC	ATLGPDKDTTEDALYFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	228	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11103  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAATTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (228/246)  IGHV3-23*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  N  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11103  91   AGTGGGTCTCAGCTATCAGTGGTAGTGGTAATAACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.7% (228/246)  IGHV3-23*01  137  ................T............GG..G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  S  T  L  F  L  Q  I  H  G  L  R  A  D  D  T  A  I  Y  L  C  A  T  L  G  P  D  K  D  T  
                    Query_11103  181  GGAGCACACTGTTTCTGCAGATACACGGCCTGAGAGCCGACGACACGGCCATATATTTATGTGCGACCCTAGGACCGGATAAAGACACAA  270
V  92.7% (228/246)  IGHV3-23*01  227  A..A...G....A......A..GA..A.............G.........G......AC.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD1-1*01   4    --------------------------------------------------------------------------------------....  7

                                      IMGT--------------------->                                  
                                      T  E  D  A  L  Y  F  D  S  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_11103  271  CTGAGGACGCCCTTTACTTTGACTCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  330
D  100.0% (7/7)     IGHD1-1*01   8    ...---------------------------------------------------------  10
J  95.7% (44/46)    IGHJ4*02     3    --------------..........A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_106475

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           341     5e-96
IGHD2-15*01                                                                                           10.3    120  
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	T	GCTGC	GCTGTACGAAGAGG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGCTGCGCTGTACGAAGAGGACAACTGGTTCGACCCC	AKDAALYEEDNWFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  N  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11104  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAATAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-30*18  47   ....................................C.....G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  R  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_11104  91   AGTGGGTGGCAGTTATCTCATATGATGGAAGGAAGAAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCG  180
V  93.6% (234/250)  IGHV3-30*18  137  ................A..............T..T.....C...........................................A....A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  T  V  N  L  E  M  N  S  L  R  I  E  D  T  A  V  Y  Y  C  A  K  D  A  A  L  Y  E  E  
                    Query_11104  181  AGAACACGGTGAATCTGGAAATGAATAGCCTGAGAATTGAGGACACGGCTGTTTATTACTGTGCGAAAGATGCTGCGCTGTACGAAGAGG  270
V  93.6% (234/250)  IGHV3-30*18  227  ........C..T.....C.......C.........GC...............G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD2-15*01  21   -----------------------------------------------------------------------.....--------------  25

                                      ---------------->                                
                                      D  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11104  271  ACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  319
J  100.0% (49/49)   IGHJ5*02     1    .................................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_106474

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD1-1*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCCTAGGACCGGATAAAGAC	ACAACTG	AGGACGCCCTTTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCTAGGACCGGATAAAGACACAACTGAGGACGCCCTTTTCTTTGACTCC	ATLGPDKDTTEDALFFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	225	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  D  S  G  K  G  L  
                    Query_11105  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAATTATGCCATGAGCTGGGTCCGCCAGGATTCAGGGAAGGGGCTGG  90
V  91.5% (225/246)  IGHV3-23*01  47   .............................................GC.........................C.C...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  N  N  T  *  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11105  91   AGTGGGTCTCAGCTATCAGTGGTAGTGGTAATAACACATAATACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.5% (225/246)  IGHV3-23*01  137  ................T............GG..G......C.................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  S  T  L  F  L  Q  I  H  G  L  R  A  D  D  T  A  I  Y  L  C  A  T  L  G  P  D  K  D  T  
                    Query_11105  181  GGAGCACACTGTTTCTGCAGATACACGGCCTGAGAGCCGACGACACGGCCATATATTTATGTGCGACCCTAGGACCGGATAAAGACACAA  270
V  91.5% (225/246)  IGHV3-23*01  227  A..A...G....A......A..GA..A.............G.........G......AC.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD1-1*01   4    --------------------------------------------------------------------------------------....  7

                                      IMGT--------------------->                                  
                                      T  E  D  A  L  F  F  D  S  W  G  Q  G  T  L  V  T  F  S  S  
                    Query_11105  271  CTGAGGACGCCCTTTTCTTTGACTCCTGGGGCCAGGGAACCCTGGTTACCTTCTCCTCAG  330
D  100.0% (7/7)     IGHD1-1*01   8    ...---------------------------------------------------------  10
J  93.2% (41/44)    IGHJ4*02     5    ----------------........A.....................C...G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_18560

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           338     4e-95
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	107	7	0	93.9
Total	N/A	N/A	242	229	13	0	94.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  G  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11106  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACGTTGAGTGGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.6% (229/242)  IGHV3-33*03  47   .....................................C..C...A.C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_11106  91   AGTGGGTGGCAGTTATATGGTATGATGGAATTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCA  180
V  94.6% (229/242)  IGHV3-33*03  137  ..............................G....................................................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_11106  181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCG  270
V  94.6% (229/242)  IGHV3-33*03  227  .......G....A......A..............................G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  90.9% (10/11)    IGHD6-13*01  7    -------------------------------------------------------------------....G......------------  17
J  100.0% (46/46)   IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11106  271  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (46/46)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_54483

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            361     4e-102
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GTTCA	TACTATGATAATAGTGGTTAT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGTTCATACTATGATAATAGTGGTTATGACTACTATTACGGTATGGACGTC	AKGSYYDNSGYDYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11107  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGAGGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.4% (240/249)  IGHV3-9*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  N  L  G  Y  A  Y  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_11107  91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAACTTAGGCTATGCGTACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAGCGCCA  180
V  96.4% (240/249)  IGHV3-9*01   137  .................................G.A...........G................A...................A.....  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  K  P  E  D  T  T  L  Y  Y  C  A  K  G  S  Y  Y  D  N  S  
                    Query_11107  181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAAACCTGAGGACACGACCTTGTATTACTGTGCAAAAGGTTCATACTATGATAATAGTG  270
V  96.4% (240/249)  IGHV3-9*01   227  .................................G.G...........G.....................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  95.2% (20/21)    IGHD3-22*01  5    --------------------------------------------------------------------------..........G.....  20

                                      -IMGT----------------------->                                 
                                      G  Y  D  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11107  271  GTTATGACTACTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  95.2% (20/21)    IGHD3-22*01  21   .....---------------------------------------------------------  25
J  98.2% (55/56)    IGHJ6*02     7    ------.......C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_106479

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTCC	AKDNTYSSGYSPLDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  L  R  Q  A  P  G  K  G  P  
                    Query_11108  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGCTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  92.0% (230/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...G........................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  S  G  S  S  T  H  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_11108  91   AGTGGGTCTCAGCGATTACTGGGAGTGGTAGTAGTACACACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  92.0% (230/250)  IGHV3-23*01  137  .............T....G...T......G....C...T.....G......................................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  M  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_11108  181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGTCGAGGACACGGCCATGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  92.0% (230/250)  IGHV3-23*01  227  ...............................G....C.............G.A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11108  271  ATTCACCCCTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  97.6% (41/42)    IGHJ4*02     7    ---------......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_18563

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           335     4e-94
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
Total	N/A	N/A	242	228	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11109  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.2% (228/242)  IGHV3-33*03  47   .....................................C..C.....C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  F  R  D  D  S  
                    Query_11109  91   AGTGGGTGGCAGTTATATGGTATGATGGAATTAAGAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTTCAGAGACGACTCCA  180
V  94.2% (228/242)  IGHV3-33*03  137  ..............................G...T........................................C.......A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_11109  181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCG  270
V  94.2% (228/242)  IGHV3-33*03  227  .......G....A......A..............................G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  90.9% (10/11)    IGHD6-13*01  7    -------------------------------------------------------------------....G......------------  17
J  97.8% (45/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_11109  271  ACCCCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  309
J  97.8% (45/46)    IGHJ5*02     13   .....................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_18564

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            332     3e-93
IGHD6-19*01                                                                                           14.1    8.5  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTCTAATAA	TGGCTGG	GGCCCCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCTCTAATAATGGCTGGGGCCCCGACTACTACGGCTTGGACGTC	ASSNNGWGPDYYGLDV	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	27	12	12	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	126	24	23	1	0	95.8
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	230	221	9	0	96.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  I  F  S  P  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 
                    Query_11110  16   TGTGCAGCCTCTGGATTCATCTTTAGTCCCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATA  105
V  96.1% (221/230)  IGHV3-7*03   64   ...................C.......AG.............................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       K  E  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_11110  106  AAGGAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAATTCACTGTATTTG  195
V  96.1% (221/230)  IGHV3-7*03   154  ...C.........................................................................C.........C..  243
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  S  N  N  G  W  G  P  D  Y  Y  G  L  D 
                    Query_11110  196  CAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTATTGTGCGAGCTCTAATAATGGCTGGGGCCCCGACTACTACGGCTTGGAC  285
V  96.1% (221/230)  IGHV3-7*03   244  ..A................................G.....C........----------------------------------------  293
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  100.0% (7/7)     IGHD6-19*01  12   -----------------------------------------------------------.......------------------------  18
J  96.0% (48/50)    IGHJ6*02     10   -------------------------------------------------------------------------..........TA.....  26

                                      -->                              
                                       V  W  G  Q  G  T  T  V  T  V  S 
                    Query_11110  286  GTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  318
J  96.0% (48/50)    IGHJ6*02     27   .................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_18565

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           268     6e-74
IGHD3-10*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGGGAGCA	ATGGCTGGGGAAGGTATTATAA	TTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTATTATAATTATGGTATGGACGCC	SRGHRGSNGWGRYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	21	3	6	70
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	213	32	6	84.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  S  G  Y  C  W  N  W  S  R  R  P  P  G  K  G 
                    Query_11111  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGAGGGTCCTTCAGTGACAGTGGTTACTGTTGGAATTGGAGCCGCCGGCCACCAGGGAAGGGA  90
V  84.9% (213/251)  IGHV4-34*01  49   .............................T............------.......AC....GC....T.....A...C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  T  N  G  G  N  I  H  L  N  P  S  L  Q  S  R  V  T  M  S  A  D  T  S 
                    Query_11111  91   CTGGAGTGGATTGGCGAAATCACTAATGGTGGAAACATCCACCTCAATCCGTCCCTCCAGAGTCGAGTCACCATGTCAGCAGACACGTCC  180
V  84.9% (213/251)  IGHV4-34*01  133  ..............G.......A.C..A......G..C.A..TA...C.........A................A....T..........  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  R  V  N  S  V  T  A  A  D  T  S  V  C  Y  C  S  R  G  H  R  G  S  N  G 
                    Query_11111  181  AAGAACCAGTTCTCCCTGAGAGTGAACTCCGTGACCGCCGCGGACACGTCTGTATGTTATTGTTCGAGAGGCCACCGGGGGAGCAATGGC  270
V  84.9% (213/251)  IGHV4-34*01  223  ...................AGC...G...T..................G....G.A...C...G.......-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  81.8% (18/22)    IGHD3-10*01  9    -------------------------------------------------------------------------------------....T  13

                                      DR3-IMGT------------------------>                                 
                                       W  G  R  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_11111  271  TGGGGAAGGTATTATAATTATGGTATGGACGCCTGGGGCCAGGGGACCACGGTCTCCGTCTCCTCA  336
D  81.8% (18/22)    IGHD3-10*01  14   .C...G..T........-------------------------------------------------  30
J  93.3% (42/45)    IGHJ6*02     18   ---------------------..........T.........A............A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_18566

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           338     4e-95
IGHD2-8*01                                                                                            12.2    31   
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TAATGG	CCCGACTGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGGCCCGACTGAACTACGGCATGGACGTC	ARLMARLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	230	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11112  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAA  90
V  94.3% (230/244)  IGHV4-59*08  49   .............................................T..........C.................A..............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  R  P  N  N  N  P  S  L  R  S  R  V  T  I  S  V  D  A  S  K  N 
                    Query_11112  91   TGGATTGAGTATATCTATTACAGAGGGCGTCCCAACAACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACGCGTCCAAGAAC  180
V  94.3% (230/244)  IGHV4-59*08  139  .......G...............T...A.CA.....T...............A.........................A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  A  R  L  N  Y  G  M 
                    Query_11112  181  CAGTTCTCCCTGAAGCTGGCCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACTAATGGCCCGACTGAACTACGGCATG  270
V  94.3% (230/244)  IGHV4-59*08  229  ..................AG............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-8*01   13   ----------------------------------------------------------------......--------------------  18
J  94.0% (47/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_11112  271  GACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCGTCA  309
J  94.0% (47/50)    IGHJ6*02     24   .............A.....................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_18567

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_11113  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_11113  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_11113  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_11113  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_326396

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            363     2e-102
IGHD3-3*01                                                                                            21.8    0.045 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAG	CGATTTGTGGAGAGGTT	CTACCCCTAAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGAGATAGCGATTTGTGGAGAGGTTCTACCCCTAAGTTTGACTAC	ARDSDLWRGSTPKFDY	273	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	80	30	25	5	0	83.3
FR2-IMGT	81	131	51	48	3	0	94.1
CDR2-IMGT	132	158	27	26	1	0	96.3
FR3-IMGT	159	272	114	102	12	0	89.5
CDR3-IMGT (germline)	273	280	8	7	1	0	87.5
Total	N/A	N/A	280	256	24	0	91.4


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  T  I  S  G  D  S  V  S  S  E  S  V  A  W  N  W  
                    Query_11114  1    CAGGACTGGTGAAGCCCTCGCAGACTCTCTCACTCACCTGTACCATCTCCGGAGACAGTGTCTCCAGCGAAAGTGTTGCTTGGAACTGGG  90
V  91.4% (256/280)  IGHV6-1*01   26   .........................C...............G..........G...........T...A.C....C.............A  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      V  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  M  S  K  W  Y  N  H  Y  S  D  S  V  K  
                    Query_11114  91   TCAGGCAGTCGCCGTCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACATGTCCAAGTGGTATAATCATTATTCAGATTCTGTGAAAA  180
V  91.4% (256/280)  IGHV6-1*01   116  ..........C..A.....................................G................G.....G...TA..........  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  M  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  M  N  S  V  T  P  E  D  T  A  M  Y  Y  
                    Query_11114  181  GTCGAATGACCATCGACCCAGACACATCCAAGAACCAGTTCTCGCTACAGATGAACTCTGTGACCCCCGAGGACACGGCTATGTACTACT  270
V  91.4% (256/280)  IGHV6-1*01   206  .......A......A............................C..G...C.............T...............G....T....  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-------------------CDR3-IMGT------------------>                                  
                                      C  A  R  D  S  D  L  W  R  G  S  T  P  K  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_11114  271  GTGCTAGAGATAGCGATTTGTGGAGAGGTTCTACCCCTAAGTTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  354
V  91.4% (256/280)  IGHV6-1*01   296  ....A.....--------------------------------------------------------------------------  305
                                      C  A  R                                                                             
D  88.2% (15/17)    IGHD3-3*01   7    -------------......T.....T....------------------------------------------------------  23
J  97.7% (42/43)    IGHJ4*02     6    -----------------------------------------.....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_326397

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         424     9e-121
IGHD3-22*01                                                                                           19.9    0.18  
IGHJ3*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CCCCCC	TACTCTCATAGCAGTGGTT	CCTACCCTTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACCCCCCTACTCTCATAGCAGTGGTTCCTACCCTTATGATGCTTTTCATATC	AGPPYSHSSGSYPYDAFHI	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	76	72	69	3	0	95.8
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	113	1	0	99.1
CDR3-IMGT (germline)	290	295	6	5	1	0	83.3
Total	N/A	N/A	291	281	10	0	96.6


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  R  I  S  C  K  G  S  G  F  S  F  A  S 
                    Query_11115    5    GTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGACTCTCTGAGGATCTCCTGTAAGGGTTCTGGATTCAGCTTTGCCAGC  94
V  96.6% (281/291)  IGHV5-10-1*01  4    ..G.....G...................................G...............................A.......A.....  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  T  D  S  Y  P  N  Y  S 
                    Query_11115    95   TACTGGATCAGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTACTGACTCTTATCCCAACTACAGC  184
V  96.6% (281/291)  IGHV5-10-1*01  94   ...........C.......................................................G..........A...........  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 
                    Query_11115    185  CCGTCCTTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCATCACCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACC  274
V  96.6% (281/291)  IGHV5-10-1*01  184  ..............................................G...........................................  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><-----------------------CDR3-IMGT----------------------->                  
                                         A  M  Y  Y  C  A  G  P  P  Y  S  H  S  S  G  S  Y  P  Y  D  A  F  H  I  W  G  Q  G  T  M 
                    Query_11115    275  GCCATGTATTACTGTGCGGGACCCCCCTACTCTCATAGCAGTGGTTCCTACCCTTATGATGCTTTTCATATCTGGGGCCAAGGGACAATG  364
V  96.6% (281/291)  IGHV5-10-1*01  274  ..................A..---------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                      
D  84.2% (16/19)    IGHD3-22*01    5    ---------------------------....A.G....T.......--------------------------------------------  23
J  98.0% (49/50)    IGHJ3*02       1    --------------------------------------------------------..........G.......................  34

                                                        
                                         V  T  V  S  S  
                    Query_11115    365  GTCACCGTCTCTTCAG  380
J  98.0% (49/50)    IGHJ3*02       35   ................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_326394

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           419     2e-119
IGHD7-27*01                                                                                           14.1    9.8   
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTCTCTACAGAACCGTCCTATGGGACA	CTAACTG	TGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCC	ARDPFSTEPSYGTLTVRFDP	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_11116  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAT  91
V  96.2% (279/290)  IGHV1-18*01  7    .....................................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       P  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  D  T  N  Y  A  Q 
                    Query_11116  92   CCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTGACACAAATTATGCACAG  181
V  96.2% (279/290)  IGHV1-18*01  97   GG..........................................................G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  D  L  R  S  L  T  S  D  D  T  A 
                    Query_11116  182  AAGTTCCAGGGCAGAGTCACCTTGACCACAGACACGTCCACGAGCACAGCCTACATGGACCTGAGGAGCCTGACATCTGACGACACGGCC  271
V  96.2% (279/290)  IGHV1-18*01  187  ...C.................A.............A.......................G.............G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------CDR3-IMGT------------------------>                  
                                       V  Y  Y  C  A  R  D  P  F  S  T  E  P  S  Y  G  T  L  T  V  R  F  D  P  W  G  Q  G  T  L 
                    Query_11116  272  GTGTATTACTGTGCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCCTGGGGCCAGGGAACCCTG  361
V  96.2% (279/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (7/7)     IGHD7-27*01  1    ---------------------------------------------------.......--------------------------------  7
J  97.8% (44/45)    IGHJ5*02     7    -------------------------------------------------------------.............................  35

                                                      
                                       V  T  V  S  T  
                    Query_11116  362  GTCACCGTCTCCACAG  377
J  97.8% (44/45)    IGHJ5*02     36   ............T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_326395

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           307     1e-85
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	AGCT	CGATTTTTGGACTGGTTATT	TTAGGTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAAGCTCGATTTTTGGACTGGTTATTTTAGGTAACTTTGACTAC	AGSSIFGLVILGNFDY	247	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	30	18	16	2	0	88.9
CDR1-IMGT	31	60	30	25	5	0	83.3
FR2-IMGT	61	111	51	50	1	0	98
CDR2-IMGT	112	132	21	20	1	0	95.2
FR3-IMGT	133	246	114	102	12	0	89.5
CDR3-IMGT (germline)	247	252	6	5	1	0	83.3
Total	N/A	N/A	240	218	22	0	90.8


Alignments

                                      <----FR1-IMGT----><----------CDR1-IMGT---------><--------------------FR2-IMGT-------------
                                       L  S  C  T  V  S  G  G  S  I  S  S  S  A  Y  Y  W  G  W  I  R  Q  S  P  G  K  G  L  E  W 
                    Query_11117  13   CTCTCCTGTACTGTCTCTGGAGGCTCCATCAGTAGCAGTGCTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAGTGG  102
V  90.8% (218/240)  IGHV4-39*01  58   ...A....C...........T...........C..T...AG.........................C.......................  147
                                       L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  E  W 

                                      --------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IMG
                                       I  G  S  I  Y  Y  S  G  N  T  Y  Y  N  P  S  L  R  S  R  L  H  M  S  V  D  T  S  K  N  Q 
                    Query_11117  103  ATTGGGAGTATCTATTATAGTGGGAACACCTACTATAATCCGTCCCTCAGGAGTCGACTCCACATGTCCGTAGACACTTCTAAGAACCAG  192
V  90.8% (218/240)  IGHV4-39*01  148  .........................G.........C..C..........A.......G..AC...A...........G..C.........  237
                                       I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q 

                                      T----------------------------------------------------><-------------------CDR3-IMGT-------
                                       F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  I  F  G  L  V  I  L  G 
                    Query_11117  193  TTCTCCCTGAGGCTGACCTCTGTGACCGCCGCAGACACGGCTGTTTATTACTGTGCGGGAAGCTCGATTTTTGGACTGGTTATTTTAGGT  282
V  90.8% (218/240)  IGHV4-39*01  238  ..........A.....G...........................G............A..------------------------------  297
                                       F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                               
D  95.0% (19/20)    IGHD3-3*01   7    ----------------------------------------------------------------...........G........------  26

                                      ----------->                                  
                                       N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11117  283  AACTTTGACTACTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  328
J  97.8% (44/45)    IGHJ4*02     4    -..................................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_326392

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            336     1e-94
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTTTG	ACTATGATAGTCGTGGTTTTTAC	AGACGTTCTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTTTGACTATGATAGTCGTGGTTTTTACAGACGTTCTAACTACTTTGACTTC	ARGFDYDSRGFYRRSNYFDF	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	104	10	0	91.2
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	230	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11118  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTACTAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.9% (230/245)  IGHV4-4*01   49   ..................G.....................GC.G......C.......................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  Q  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_11118  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCCAGTACAACCCGTCACTCAAGAGTCGAGTCACGATATCAGTAGACAAGTCCAAG  180
V  93.9% (230/245)  IGHV4-4*01   139  ....................................A.C...........C.................C.....................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------------CDR3
                                       N  Q  I  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  F  D  Y  D  S  R  G 
                    Query_11118  181  AACCAGATCTCCCTGAGGTTGAATTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGGCTTTGACTATGATAGTCGTGGT  270
V  93.9% (230/245)  IGHV4-4*01   229  ......T.........A.C...GC...............................G.........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  91.3% (21/23)    IGHD3-22*01  6    -------------------------------------------------------------------------...........A.....  22

                                      -IMGT------------------------>                                  
                                       F  Y  R  R  S  N  Y  F  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_11118  271  TTTTACAGACGTTCTAACTACTTTGACTTCTGGGGCCAGGGAACCCTGGTCGCTGTCTCCTCAG  334
D  91.3% (21/23)    IGHD3-22*01  23   .A....----------------------------------------------------------  28
J  93.8% (45/48)    IGHJ4*02     1    ----------------............A......................A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_334757

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           285     4e-79
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TGGGCGCAAAACTCGGTCA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATGGGCGCAAAACTCGGTCAGATGCTTTTGATATC	VRDGRKTRSDAFDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	96	18	0	84.2
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	216	34	0	86.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  V  F  S  S  S  W  M  H  W  V  R  Q  T  P  E  K  G  L  
                    Query_11119  1    GGTCCCTGAGACTCTCCTGTACAGCGTCCGGATTCGTCTTCAGTAGTTCCTGGATGCACTGGGTCCGCCAAACTCCAGAAAAGGGGCTGG  90
V  86.4% (216/250)  IGHV3-74*01  47   ....................G....C..T......AC.........C.A......................G......GG..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  G  D  G  S  A  T  S  Y  A  E  F  V  K  G  R  F  A  I  S  R  D  N  A  
                    Query_11119  91   TTTGGGTCTCACGTATTAATGGTGATGGGAGTGCCACATCCTACGCGGAGTTCGTGAAGGGCCGATTCGCCATCTCCAGAGACAACGCCA  180
V  86.4% (216/250)  IGHV3-74*01  137  .G..................A...........AG....AG.........C.C................A.....................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  Q  F  L  Q  M  N  S  L  R  V  E  D  S  G  I  Y  C  C  V  R  D  G  R  K  T  R  S  
                    Query_11119  181  AGAACACTCAGTTTTTGCAAATGAACAGTCTCAGAGTTGAGGACAGTGGTATTTATTGCTGTGTGAGAGATGGGCGCAAAACTCGGTCAG  270
V  86.4% (216/250)  IGHV3-74*01  227  .......G.T..A.C................G....CC.......CG.C.G.G....A.....CA.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  98.0% (48/49)    IGHJ3*02     2    -----------------------------------------------------------------------------------------.  2

                                      ------------->                                  
                                      D  A  F  D  I  W  G  Q  G  T  K  V  T  V  S  S  
                    Query_11119  271  ATGCTTTTGATATCTGGGGCCAAGGGACAAAGGTCACCGTCTCTTCAG  318
J  98.0% (48/49)    IGHJ3*02     3    ..............................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_326390

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTGA	TATGGTTCGCGGAGTT	CTTGAGAGGGAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTGATATGGTTCGCGGAGTTCTTGAGAGGGAGGACTAC	ARLDMVRGVLEREDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_11120  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGCAAGGGTTCTGGGTACAGCTTTTCCACCTA  90
V  97.6% (282/289)  IGHV5-51*03  6    ............................................................T...........A.........A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  S  P
                    Query_11120  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACAGCCC  180
V  97.6% (282/289)  IGHV5-51*03  96   ........G........................................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11120  181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  ........A.................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  L  D  M  V  R  G  V  L  E  R  E  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11120  271  CATGTATTACTGTGCGAGACTTGATATGGTTCGCGGAGTTCTTGAGAGGGAGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  97.6% (282/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  93.8% (15/16)    IGHD3-10*01  8    ------------------------.........G......--------------------------------------------------  23
J  100.0% (40/40)   IGHJ4*02     9    ----------------------------------------------------......................................  46

                                        
                                        
                    Query_11120  361  AG  362
J  100.0% (40/40)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_326391

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           308     4e-86
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGACAG	ATTGTCGTAGTCCCCGGTGCTA	C	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGACAGATTGTCGTAGTCCCCGGTGCTACCTACGGTATGGACGTC	ARDRQIVVVPGATYGMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	221	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  S  S  S  Y  F  W  T  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_11121  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCAGCAGTAGTTACTTCTGGACTTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  90.2% (221/245)  IGHV4-59*01  49   .....................................T...........A.....GC.................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  D  G  S  G  S  P  R  Y  N  P  S  L  K  S  R  V  T  M  S  L  D  T  S  K  N 
                    Query_11121  91   TGGATTGGCTATGTCGATGGCAGTGGGAGTCCCAGGTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCGCTAGACACGTCCAAGAAC  180
V  90.2% (221/245)  IGHV4-59*01  139  ........G...A..T..TA.........CA...AC................................A..AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       R  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  C  C  A  R  D  R  Q  I  V  V  V  P  G 
                    Query_11121  181  CGATTCTCCCTGAGGCTGAATTCTGTGACCGCTGCGGACACGGCCGTGTATTGCTGTGCGAGAGATCGACAGATTGTCGTAGTCCCCGGT  270
V  90.2% (221/245)  IGHV4-59*01  229  .AG..........A.....GC...............................A............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  81.8% (18/22)    IGHD2-2*01   6    ------------------------------------------------------------------------.....A.....A..A.C.  23

                                      -------------------->                                 
                                       A  T  Y  G  M  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_11121  271  GCTACCTACGGTATGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  324
D  81.8% (18/22)    IGHD2-2*01   24   ....--------------------------------------------------  27
J  98.0% (48/49)    IGHJ6*02     14   -----...............................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_92048

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           327     9e-92
IGHD2-21*02                                                                                           16.1    2.3  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCACAAGTTGACGG	TGTGGCAGTGACTG	GCGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCACAAGTTGACGGTGTGGCAGTGACTGGCGGGTGGTTCGACCCC	ARSQVDGVAVTGGWFDP	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  V  S  S  A  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  E 
                    Query_11122  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCGTCAGCAGTGCTTCCTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGAA  90
V  92.0% (229/249)  IGHV4-61*01  49   ...................C...........G..............G.AGT..........G..........................G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  S  I  G  Y  V  Y  Y  S  G  A  T  N  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S 
                    Query_11122  91   CTTGAATCAATTGGCTATGTCTATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGGGTCGAGTCACCATATCAGTGGACACGTCC  180
V  92.0% (229/249)  IGHV4-61*01  139  ..G..G.GG.....G...A..............AG.........................A...................A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  S  Q  V  D  G  V  A 
                    Query_11122  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCATCTATTACTGTGCGAGATCACAAGTTGACGGTGTGGCA  270
V  92.0% (229/249)  IGHV4-61*01  229  ...................................................G.G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  85.7% (12/14)    IGHD2-21*02  8    -----------------------------------------------------------------------------------.....TG  14

                                      MGT-------------------->                                  
                                       V  T  G  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11122  271  GTGACTGGCGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  85.7% (12/14)    IGHD2-21*02  15   .......---------------------------------------------------  21
J  100.0% (46/46)   IGHJ5*02     6    ------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_169301

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            311     4e-87
IGHD2-15*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCATTGTGGA	AGTGGTGG	CTGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCATTGTGGAAGTGGTGGCTGTTTCTACTTTGACATC	ARVHCGSGGCFYFDI	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	46	5	0	90.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	223	24	0	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  N  D  S  I  S  G  S  D  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_11123  1    ACCCTGTCCCTCACCTGCGCTGTCTCTAATGACTCCATCAGCGGTTCTGACTGGTGGACTTGGATCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.3% (223/247)  IGHV4-4*02   49   ...........................GG..G..........A..AG.A.........G....G..........................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  S  A  D  T  H  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  N  S  K 
                    Query_11123  91   GAGTGGATCGGAGAGATCCATCATAGTGCGGACACCCACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAACTCTAAG  180
V  90.3% (223/247)  IGHV4-4*02   139  ........T..G..A...T.........G.AG....A..............................................G..C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  E  L  R  S  V  T  A  A  D  A  A  L  Y  Y  C  A  R  V  H  C  G  S  G  G  C 
                    Query_11123  181  AACCAATTCTCCCTGGAGCTGAGGTCTGTGACCGCCGCGGACGCGGCCCTGTATTACTGTGCGAGAGTTCATTGTGGAAGTGGTGGCTGT  270
V  90.3% (223/247)  IGHV4-4*02   229  .....G.........A.......C..................A.....G..................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD2-15*01  11   ------------------------------------------------------------------------------........----  18

                                      -------------->                                  
                                       F  Y  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11123  271  TTCTACTTTGACATCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  95.7% (45/47)    IGHJ4*02     2    --..........TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_326398

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           336     1e-94
IGHD3-10*01                                                                                           39.1    3e-07
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	G	ACTATGGAACGGGGAGTTATTATAAC	AAGACCC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACTATGGAACGGGGAGTTATTATAACAAGACCCATGGACGTC	AKTMERGVIITRPMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  S  F  S  H  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11124  1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCAGCTTCAGTCACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-30*18  47   ........................C...........C.......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  A  Y  D  E  S  F  K  S  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11124  91   AGTGGGTGGCAGTTATAGCATATGATGAAAGTTTTAAATCTTACGCAGCCTCCGTGAAGGGCCGATTTACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-30*18  137  .................T.........G....AA.....AC..T....A..................C......................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  K  T  M  E  R  G  V  I  
                    Query_11124  181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGATGAGGACACGGCTGTGTATTATTGTGCGAAGACTATGGAACGGGGAGTTATTA  270
V  93.5% (231/247)  IGHV3-30*18  227  ...A................................C.....................C........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.3% (24/26)    IGHD3-10*01  6    --------------------------------------------------------------------.......TT.............  27

                                      T------------------>                                 
                                      I  T  R  P  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11124  271  TAACAAGACCCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  323
D  92.3% (24/26)    IGHD3-10*01  28   ....-------------------------------------------------  31
J  97.6% (41/42)    IGHJ6*02     21   -----------......................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_326399

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD4-4*01                                                                                            16.1    2.2   
IGHJ3*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-4*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGGAAGACA	GACTACAG	C	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGGAAGACAGACTACAGCGATGCTTTTGATATG	AWKTDYSDAFDM	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	238	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11125  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.7% (238/246)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  Y  T  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  M  S 
                    Query_11125  91   CTGGAGTGGATTGGCTACATCTCTTACACTGGGAGAACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACATGTCT  180
V  96.7% (238/246)  IGHV4-31*03  139  ..............G.......A.....G......C.................................................C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  W  K  T  D  Y  S  D  A 
                    Query_11125  181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACGGCCGCGGACACGGCCGTCTATTACTGTGCGTGGAAGACAGACTACAGCGATGCT  270
V  96.7% (238/246)  IGHV4-31*03  229  ...................A...............T.................G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (8/8)     IGHD4-4*01   2    ---------------------------------------------------------------------------........-------  9
J  98.0% (48/49)    IGHJ3*02     2    ------------------------------------------------------------------------------------......  7

                                      -------->                                  
                                       F  D  M  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11125  271  TTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  313
J  98.0% (48/49)    IGHJ3*02     8    ........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_313767

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           341     5e-96
IGHD4-4*01                                                                                            18.0    0.58 
IGHJ5*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-4*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGGCA	TGACTACAG	AAAAGGGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGGCATGACTACAGAAAAGGGGACTGGTTCGACTCC	ARGGHDYRKGDWFDS	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  G  W  I  R  Q  H  P  G  K  G 
                    Query_11126  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGGGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  93.6% (234/250)  IGHV4-31*03  49   ............................................................A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  M  S  R  V  S  L  S  V  D  T  S 
                    Query_11126  91   CTGGAGTGGATTGGCTTCATCTACTATAGTGGGACCACCTACTACAACCCGTCCCTCATGAGTCGAGTTAGTTTATCAGTGGACACGTCT  180
V  93.6% (234/250)  IGHV4-31*03  139  ..............G.A......T..C.......G.......................A...........CCA.......A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  H  D  Y  R  K 
                    Query_11126  181  AAGAACCAGTTCTCCCTGAGGCTGACCTCCGTGACTGCCGCGGACACGGCCGTTTATTATTGTGCGAGAGGAGGGCATGACTACAGAAAA  270
V  93.6% (234/250)  IGHV4-31*03  229  ...................A.....G...T.......................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD4-4*01   1    -----------------------------------------------------------------------------.........----  9

                                      ----------------->                                  
                                       G  D  W  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11126  271  GGGGACTGGTTCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  322
J  95.8% (46/48)    IGHJ5*01     4    ----......................A....................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_153580

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            360     1e-101
IGHD3-16*01                                                                                           50.7    9e-11 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAAGG	ATTATGATTACGTTTGGGGGAGTTAT	TCTCTCGAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAAGGATTATGATTACGTTTGGGGGAGTTATTCTCTCGAGTAC	ARDKDYDYVWGSYSLEY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  N  M  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11127  1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTTAATATGTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-7*01   47   ........................C.................G..GC...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11127  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAACACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-7*01   137  ......................................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  A  Y  Y  C  A  R  D  K  D  Y  D  Y  V  
                    Query_11127  181  GGAACTCTCTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGCGTATTACTGTGCGAGAGACAAGGATTATGATTACGTTT  270
V  96.0% (240/250)  IGHV3-7*01   227  A......A................................G..........T..................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (26/26)   IGHD3-16*01  3    ---------------------------------------------------------------------------...............  17

                                      GT-------------------->                                  
                                      W  G  S  Y  S  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11127  271  GGGGGAGTTATTCTCTCGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (26/26)   IGHD3-16*01  18   ...........----------------------------------------------  28
J  100.0% (37/37)   IGHJ4*02     12   --------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_313766

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           299     2e-83
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	240	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	217	26	0	89.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E  
                    Query_11128  4    CCCTGAGACTCTCCTGTACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAGT  93
V  89.3% (217/243)  IGHV4-59*01  50   .....TCC...A....C...........T..........GTAG..A..A......C............C.....GG..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N  
                    Query_11128  94   GGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAACC  183
V  89.3% (217/243)  IGHV4-59*01  140  ..A....G...A.....T..........C.....C.....................................T.................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------CDR3-IMGT-------->       
                                      Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G  
                    Query_11128  184  AGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGCC  273
V  89.3% (217/243)  IGHV4-59*01  230  ..T...............G................................A...........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (7/7)     IGHD5-18*01  10   ---------------------------------------------------------------.......--------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------------------------------.....T.........  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_11128  274  AGGGAACCCTGGTCACCGTCTCCTCAG  300
J  97.6% (41/42)    IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_93053

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           363     1e-102
IGHD6-19*01                                                                                           21.8    0.040 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCAGG	GCAGTGGCTGG	CACG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTC	ARVPGQWLARGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11129  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (239/246)  IGHV3-53*01  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  M  Y  S  G  G  T  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_11129  91   AGTGGGTCTCAGTTATGTATAGCGGTGGGACCACATACTACGCAGAGTCCGTGAAGGGCCGATTCACCATCTCAAGAGACAATTCCAAGA  180
V  97.2% (239/246)  IGHV3-53*01  137  ................T...........T.G...............C..........................C................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  G  Q  W  L  A  R  
                    Query_11129  181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGTCCCAGGGCAGTGGCTGGCACGCG  270
V  97.2% (239/246)  IGHV3-53*01  227  ..................................................................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD6-19*01  8    -------------------------------------------------------------------------...........------  18
J  100.0% (46/46)   IGHJ6*02     17   ----------------------------------------------------------------------------------------..  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11129  271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (46/46)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_243857

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           346     2e-97
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AC	ATTACGATTTTTCGAGTGGT	CTCATTATCGGAAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACATTACGATTTTTCGAGTGGTCTCATTATCGGAACTGACTAC	AREHYDFSSGLIIGTDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  R  G  S  Y  Y  W  S  W  N  R  Q  S  P  G  K  G 
                    Query_11130  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGAGGTTCTTACTACTGGAGTTGGAACCGGCAGTCCCCAGGGAAGGGA  90
V  94.0% (236/251)  IGHV4-61*01  49   .........................................C..T...AG............C....T.......C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  H  S  G  S  T  N  Y  H  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_11130  91   CTGGAGTGGATTGGGTATATTTATCACAGTGGGAGCACCAACTATCACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCC  180
V  94.0% (236/251)  IGHV4-61*01  139  ....................C...T...................CA................................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  H  Y  D  F  S  S 
                    Query_11130  181  AAGAACCAGTTCTCCCTGAAGCTGAATTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGAACATTACGATTTTTCGAGT  270
V  94.0% (236/251)  IGHV4-61*01  229  .........................GC..........................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-3*01   3    -------------------------------------------------------------------------............G....  19

                                      MGT-------------------->                                  
                                       G  L  I  I  G  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11130  271  GGTCTCATTATCGGAACTGACTACTGGGGCCAGGGTACCCTGGTCACCGTCTCCTCAG  328
D  95.0% (19/20)    IGHD3-3*01   20   ...-------------------------------------------------------  22
J  97.6% (40/41)    IGHJ4*02     8    -----------------..................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_243856

Length=425
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           271     8e-75
IGHD2-15*01                                                                                           25.7    0.004
IGHJ4*01                                                                                              52.6    6e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-15*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCAGGGAGAG	TGTATTGGTGGTAGGTGCT	CCCCTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGAGCAGGGAGAGTGTATTGGTGGTAGGTGCTCCCCTGCCTACTTTGACTTC	AREQGECIGGRCSPAYFDF	230	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	20	4	0	83.3
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	19	5	0	79.2
FR3-IMGT	116	229	114	100	14	0	87.7
CDR3-IMGT (germline)	230	237	8	7	1	0	87.5
Total	N/A	N/A	225	199	26	0	88.4


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  N  T  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  W  S  G
                    Query_11131  13   GTCTGGATTCACCTTCAATACGTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCGCTTATTTGGTCTGG  102
V  88.4% (199/225)  IGHV3-33*01  72   .................G..GC.A...................................................AG....A....A..A  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  G  N  K  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  S  S  N  N  S  L  S  L  Q  M  N
                    Query_11131  103  CGGAGGTAATAAATATTATTCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAACAATAGCCTCTCTCTCCAAATGAA  192
V  88.4% (199/225)  IGHV3-33*01  162  T...A..........C...G.......................................A......G..C.CG..G.A...G........  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------------CDR3-IMGT--------------------
                                        S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  E  Q  G  E  C  I  G  G  R  C  S  P  A  Y  F  D
                    Query_11131  193  CAGCCTGCGAGCCGAGGACACGGCTATTTACTACTGTGCGCGAGAGCAGGGAGAGTGTATTGGTGGTAGGTGCTCCCCTGCCTACTTTGA  282
V  88.4% (199/225)  IGHV3-33*01  252  .......A.................G.G..T.........A....---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  89.5% (17/19)    IGHD2-15*01  8    -------------------------------------------------------....G.........C....----------------  26
J  89.7% (35/39)    IGHJ4*01     2    ---------------------------------------------------------------------------------.........  10

                                      --->                          
                                        F  W  G  H  G  P  L  V  S  V
                    Query_11131  283  CTTCTGGGGCCACGGACCCCTGGTCTCCGT  312
J  89.7% (35/39)    IGHJ4*01     11   ..A.........A...A........A....  40


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41761224


Query= Query_243854

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           300     9e-84
IGHD2-2*01                                                                                            27.6    8e-04
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTTCTC	TATTGTAGTTGTACCAG	TCCCGGATGAAGACAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACTTCTCTATTGTAGTTGTACCAGTCCCGGATGAAGACAAGTACGGTCTGGACGCC	AKDFSIVVVPVPDEDKYGLDA	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  S  A  M  T  W  V  R  Q  P  P  G  K  G  L  
                    Query_11132  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTTAGCACTTCCGCCATGACCTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  88.4% (221/250)  IGHV3-23*01  47   .....................................C.......GC.AT.......G.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  L  T  G  T  G  G  D  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_11132  91   AGTGGGTCGCAAGTCTTACTGGGACTGGGGGCGACACACACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGATAATCCCA  180
V  88.4% (221/250)  IGHV3-23*01  137  ........T..GC.A...G...T.G...T..TAG....T.........................G.................C...T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  K  T  L  Y  L  E  M  T  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  F  S  I  V  V  V  
                    Query_11132  181  AGAAAACATTGTATCTGGAAATGACGAGTCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGACTTCTCTATTGTAGTTGTAC  270
V  88.4% (221/250)  IGHV3-23*01  227  ....C..GC........C......AC..C.........................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  94.1% (16/17)    IGHD2-2*01   5    ----------------------------------------------------------------------------.........A....  18

                                      DR3-IMGT-------------------------->                                 
                                      P  V  P  D  E  D  K  Y  G  L  D  A  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_11132  271  CAGTCCCGGATGAAGACAAGTACGGTCTGGACGCCTGGGGCCAAGGGACAACAGTCATCGTCTCCTCA  338
D  94.1% (16/17)    IGHD2-2*01   19   ...-----------------------------------------------------------------  21
J  89.6% (43/48)    IGHJ6*02     15   --------------------......A......T...............C..G....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_243853

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD2-8*02                                                                                            12.2    31   
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGA	GTACTG	CCACCGAGTCTAGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGAGTACTGCCACCGAGTCTAGGTGGTTCGACCCC	ARDQSTATESRWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11133  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   .......................................................G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  H  S  G  T  T  Q  Y  N  P  S  L  K  S  R  V  T  I  S  M  D  T  S  K  K 
                    Query_11133  91   TGGATTGGTTACATCCATCACAGTGGGACCACCCAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATGGACACGTCCAAGAAG  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G..T...T..T.........G....A.C....................................G.A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  S  T  A  T  E  S  R 
                    Query_11133  181  CAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTTTATTATTGTGCGAGAGATCAGAGTACTGCCACCGAGTCTAGG  270
V  93.5% (229/245)  IGHV4-59*01  229  .............A......C...........T..............G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-8*02   9    ----------------------------------------------------------------------......--------------  14

                                      ----------->                                  
                                       W  F  D  P  W  G  H  G  T  L  V  T  V  S  S  
                    Query_11133  271  TGGTTCGACCCCTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.8% (45/46)    IGHJ5*02     6    ....................G.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_243852

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            333     1e-93
IGHD3-16*01                                                                                           12.2    30   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	N/A	TGGGGG	GGGCGGGATGGCAACCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGGGGGGCGGGATGGCAACCCGACTAC	VGGAGWQPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  L  I  F  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11134  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGACTCATCTTTAGTGACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.8% (228/243)  IGHV3-7*01   47   ....................G...........T...C.......AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  E  Q  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11134  91   AGTGGGTGGCCAACATAGAGCAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.8% (228/243)  IGHV3-7*01   137  .................A....................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  V  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  V  G  G  A  G  W  Q  P  D  
                    Query_11134  181  AGAATTCAGTGTTTCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCTGTGTACTTTTGTGTGGGGGGGGCGGGATGGCAACCCGACT  270
V  93.8% (228/243)  IGHV3-7*01   227  ....C...C...A............C.............................T.AC....---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (6/6)     IGHD3-16*01  17   ---------------------------------------------------------------......---------------------  22
J  100.0% (38/38)   IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                
                                      Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11134  271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  304
J  100.0% (38/38)   IGHJ4*02     13   ..................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_243851

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*03                                                                                           254     9e-70
IGHD1-26*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGTTCCAGG	GTGGGAG	GTTCTCGGGGACTA	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGTTCCAGGGTGGGAGGTTCTCGGGGACTAGACTCC	AGSRVGGSRGLDS	233	271	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	20	22	3	3	0	0	100
CDR1-IMGT	23	46	24	18	6	0	75
FR2-IMGT	47	97	51	45	6	0	88.2
CDR2-IMGT	98	118	21	17	4	0	81
FR3-IMGT	119	232	114	103	11	0	90.4
CDR3-IMGT (germline)	233	235	3	3	0	0	100
Total	N/A	N/A	216	189	27	0	87.5


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-----CDR2-I
                                       S  G  G  S  I  T  D  F  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  Y  I  G  Y  I  Y  Y  T 
                    Query_11135  20   TCTGGAGGCTCCATCACTGACTTCTACTGGACCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAATACATTGGCTATATCTATTACACT  109
V  87.5% (189/216)  IGHV4-59*03  73   .....T..........G.AGT.A........G..................A..............G.GG.....G.............G.  162
                                       S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S 

                                      MGT-----><----------------------------------------------------FR3-IMGT--------------------
                                       G  D  T  N  Y  N  P  S  L  R  G  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  N  S 
                    Query_11135  110  GGCGACACCAACTACAATCCCTCCCTCAGGGGTCGAGTCACCATATCCGTGGACACGTCGAAGAACCAATTCTCCCTGAAACTTAACTCT  199
V  87.5% (189/216)  IGHV4-59*03  163  ..GAG............C..........A.A................A..A........C....................G..G.G....  252
                                       G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S 

                                      --------------------------------><--------------CDR3-IMGT-------------->                  
                                       V  T  A  A  D  T  A  A  Y  Y  C  A  G  S  R  V  G  G  S  R  G  L  D  S  W  G  Q  G  I  L 
                    Query_11135  200  GTGACCGCTGCGGACACGGCCGCTTATTACTGTGCGGGTTCCAGGGTGGGAGGTTCTCGGGGACTAGACTCCTGGGGCCAGGGAATCCTG  289
V  87.5% (189/216)  IGHV4-59*03  253  ......................TG............------------------------------------------------------  288
                                       V  T  A  A  D  T  A  V  Y  Y  C  A                                                       
D  100.0% (7/7)     IGHD1-26*01  7    ---------------------------------------------.......--------------------------------------  13
J  92.5% (37/40)    IGHJ4*02     9    ------------------------------------------------------------------....A..............C....  32

                                                      
                                       V  T  I  S  S  
                    Query_11135  290  GTCACCATCTCCTCAG  305
J  92.5% (37/40)    IGHJ4*02     33   ......G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_243850

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           255     3e-70
IGHD3-3*01                                                                                            14.1    8.2  
IGHJ1*01                                                                                              48.8    7e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GCCCGAATTGGGGCCCCCT	TTATTTTACC	N/A	CACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGGCCCGAATTGGGGCCCCCTTTATTTTACCCAC	TTGPNWGPLYFTH	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	30	15	6	9	50
FR3-IMGT	126	239	114	94	20	0	82.5
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	255	211	35	9	82.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  D  D  A  W  M  S  W  V  R  Q  V  P  G  Q  G  L  
                    Query_11136  1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCCGTTTCGATGACGCCTGGATGAGCTGGGTCCGCCAGGTTCCAGGGCAGGGGCTGG  90
V  82.7% (211/255)  IGHV3-15*01  47   .......T..............A............AC....AG.A...........................C.......A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  S  Q  S  E  T  D  D           D  Y  A  A  P  V  K  R  R  V  T  T  S  R  D  
                    Query_11136  91   AGTGGGTTGGCCGTAGTCAAAGTGAAACGGATGAT---------GACTATGCTGCACCCGTGAAGAGAAGAGTCACCACCTCAAGAGACA  171
V  82.7% (211/255)  IGHV3-15*01  137  ...............T.A....CA....T....G.GGGACAACA.....C..............AG.C...T......T.........TG  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      N  S  R  N  M  V  Y  L  Q  L  N  S  L  K  S  E  D  T  G  I  Y  F  W  T  T  G  P  N  W  G  
                    Query_11136  172  ATTCAAGAAACATGGTGTATCTGCAGCTGAACAGCCTGAAAAGCGAGGACACAGGCATTTACTTCTGGACCACAGGCCCGAATTGGGGCC  261
V  82.7% (211/255)  IGHV3-15*01  227  ......A.....C.C..........AA...............C...........C.G.G..T.A...T.......---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 

                                      GT-------------->                                  
                                      P  L  Y  F  T  H  W  G  Q  G  T  P  V  T  G  S  S  
                    Query_11136  262  CCCTTTATTTTACCCACTGGGGCCAGGGGACCCCGGTCACCGGCTCGTCAG  312
D  90.0% (9/10)     IGHD3-3*01   22   ----.....A....-------------------------------------  31
J  89.2% (33/37)    IGHJ1*01     16   --------------..............C....T........T...C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_325634

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            338     5e-95
IGHD6-6*01                                                                                            12.2    32   
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CAAG	TCGTCC	GAAATCGACA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACAAGTCGTCCGAAATCGACAACTTCTACGGTTTGGACGTC	AKDKSSEIDNFYGLDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  F  G  F  T  F  E  D  Y  A  M  H  W  V  R  Q  G  P  G  K  G  L  
                    Query_11137  1    GGTCCCTGAGACTCTCCTGTGCAGCCTTTGGATTCACGTTTGAAGATTATGCCATGCACTGGGTCCGGCAAGGTCCAGGGAAGGGCCTGG  90
V  93.2% (233/250)  IGHV3-9*01   47   ...........................C.........C.....T............................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  G  Y  T  I  A  Y  A  D  S  V  K  G  R  F  T  L  S  R  D  N  A  
                    Query_11137  91   AATGGGTCTCAGGAATTAGTTGGAATGGTTATACCATAGCCTATGCGGACTCTGTGAAGGGCCGATTCACCCTCTCCAGAGACAACGCCA  180
V  93.2% (233/250)  IGHV3-9*01   137  .G...........T............A..GG..G.....G...............................A..................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  S  L  Y  L  Q  M  N  S  L  G  A  D  D  T  A  F  Y  Y  C  A  K  D  K  S  S  E  I  D  
                    Query_11137  181  GGAACTCCCTGTATCTGCAAATGAACAGTCTGGGAGCTGACGACACGGCCTTCTATTATTGTGCAAAAGACAAGTCGTCCGAAATCGACA  270
V  93.2% (233/250)  IGHV3-9*01   227  A...............................A.......G...........G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD6-6*01   13   --------------------------------------------------------------------------......----------  18

                                      T------------------>                                 
                                      N  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11137  271  ACTTCTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.2% (51/53)    IGHJ6*02     10   ...A.......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_103780

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q 
                    Query_11138  1    ACCCTGTCCCTCACCTGCACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAA  90
V  91.0% (223/245)  IGHV4-59*01  49   ....................T..........................C........C............C.................G.G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_11138  91   TGGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAAC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A....G.....C...T....T....G......C..............C...........C.C.........A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E 
                    Query_11138  181  CAGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAG  270
V  91.0% (223/245)  IGHV4-59*01  229  ...T.........AG..G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  1    -----------------------------------------------------------------------------............-  12

                                      -------------->                                  
                                       D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_11138  271  GATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  319
J  92.5% (37/40)    IGHJ4*02     9    ---------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_243859

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           332     4e-93
IGHD3-22*01                                                                                           21.8    0.043
IGHJ4*01                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCGGAGGTGGGATGACGCGGACTACTCCTC	TGATACTAGTGGTT	TTCGACCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCGGAGGTGGGATGACGCGGACTACTCCTCTGATACTAGTGGTTTTCGACCT	ARGRRWDDADYSSDTSGFRP	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  N  S  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11139  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCCGGAACAGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  92.7% (230/248)  IGHV4-31*03  49   .......................................A.C.GTG............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  H  S  G  S  A  Y  Y  N  P  S  L  K  S  R  T  S  I  S  V  D  T  S 
                    Query_11139  91   CTGGAATGGATTGGCTACATCTATCACAGTGGGAGCGCCTACTACAACCCGTCCCTCAAGAGTCGAACTTCCATATCAGTAGACACGTCT  180
V  92.7% (230/248)  IGHV4-31*03  139  .....G........G.........T...........A.............................GT.A....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  W  D  D  A 
                    Query_11139  181  AAGAACCAGTTCTCTCTGATTCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGGGGCCGGAGGTGGGATGACGCG  270
V  92.7% (230/248)  IGHV4-31*03  229  ..............C....AG....GC.............................T...........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      DR3-IMGT------------------------>                                  
                                       D  Y  S  S  D  T  S  G  F  R  P  W  G  H  G  T  L  V  T  V  S  S  
                    Query_11139  271  GACTACTCCTCTGATACTAGTGGTTTTCGACCTTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  337
D  92.9% (13/14)    IGHD3-22*01  10   -----------.....G........------------------------------------------  23
J  97.1% (33/34)    IGHJ4*01     15   ---------------------------------........A.........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_243858

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           332     3e-93
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	CCCCTCCAAGACCAA	TACGGTGACTAC	GCATATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGACCCCTCCAAGACCAATACGGTGACTACGCATATAACTAC	ARPLQDQYGDYAYNY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  E  F  T  F  S  V  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11140  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGAATTCACCTTCAGTGTCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  92.7% (230/248)  IGHV3-74*01  47   ..............................G.............AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  R  I  S  F  D  G  S  D  T  N  Y  A  D  S  V  K  G  R  Y  T  V  S  R  D  N  A  
                    Query_11140  91   AGTGGATCTCACGTATTAGTTTTGATGGGAGTGACACAAACTACGCGGACTCCGTGAAGGGCCGATACACCGTCTCCAGAGACAACGCCA  180
V  92.7% (230/248)  IGHV3-74*01  137  T....G............A.AG..........AG.....G..........................T....A..................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  L  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  L  Q  D  Q  Y  G  
                    Query_11140  181  AGAATACGCTGTATTTACTAATGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGACCCCTCCAAGACCAATACGGTG  270
V  92.7% (230/248)  IGHV3-74*01  227  ....C.........C.G.A.................................G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD4-17*01  5    -----------------------------------------------------------------------------------.......  11

                                      ---------------->                                  
                                      D  Y  A  Y  N  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11140  271  ACTACGCATATAACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  321
D  100.0% (12/12)   IGHD4-17*01  12   .....----------------------------------------------  16
J  97.4% (38/39)    IGHJ4*02     10   ------------.................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_58601

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           357     1e-100
IGHD3-9*01                                                                                            12.2    31    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGA	ATATTT	CCCACGAGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGACGAATATTTCCCACGAGGCTTTCAGTAC	VRDEYFPRGFQY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11141  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGGCTACTGGATGCACTGGGTCCGCCAAGCACCAGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-74*01  47   ............................................A............................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  I  I  D  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11141  91   TGTGGGTCTCACGTATTAATAGTGATGGGAGTATCATAGACTCCGCGGATTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (239/250)  IGHV3-74*01  137  .................................G..C.AG..A......C........................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  G  T  A  V  Y  Y  C  V  R  D  E  Y  F  P  R  G  
                    Query_11141  181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGGCACGGCTGTGTATTACTGTGTAAGAGACGAATATTTCCCACGAGGCT  270
V  95.6% (239/250)  IGHV3-74*01  227  .......G..................................A....................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-9*01   9    -------------------------------------------------------------------------......-----------  14
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  Q  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11141  271  TTCAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  95.5% (42/44)    IGHJ4*02     7    ..G.C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_58600

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           322     2e-90
IGHD6-25*01                                                                                           10.3    116  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GCCGGGATT	CAGCG	AAATCAGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGCCGGGATTCAGCGAAATCAGGCTAC	ATGRDSAKSGY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	226	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  Y  H  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11142  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACTGTCAGCAGCTACCACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTG  90
V  91.9% (226/246)  IGHV3-53*01  47   .....................................C.....T...A..T......G..............................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  T  I  Y  I  D  A  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  K  
                    Query_11142  91   AGTGGGTCTCAACTATCTATATCGATGCTACCACATACTACGCGGACTCCGTGAAGGGCCGATTTACCATCTCCAGAGACTATTCCAAGA  180
V  91.9% (226/246)  IGHV3-53*01  137  ...........GT...T....G..G..G..G............A....................C...............A.........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  T  G  R  D  S  A  K  S  G  
                    Query_11142  181  ACACACTGTATCTTCAGATGAACACCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGACAGGCCGGGATTCAGCGAAATCAGGCT  270
V  91.9% (226/246)  IGHV3-53*01  227  ....G...........A.......G......................................G..------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (5/5)     IGHD6-25*01  9    ---------------------------------------------------------------------------.....----------  13
J  100.0% (38/38)   IGHJ4*02     11   ----------------------------------------------------------------------------------------..  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11142  271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (38/38)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_58603

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           299     2e-83
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	GGTCGATAATC	GTGGATAT	CCC	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGGTCGATAATCGTGGATATCCCGCTTTTGACATC	VRVDNRGYPAFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	219	28	0	88.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  T  S  G  F  V  F  R  D  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11143  1    GGTCCCTGAGACTCTCCTGCGTAACGTCTGGATTCGTCTTCAGAGACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  88.7% (219/247)  IGHV3-33*01  47   ...................T.C.G...........AC......TAG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  K  E  Y  Y  E  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_11143  91   AGTGGGTGGCAGTTATTTGGTATGATGGAAGTAAGGAATATTATGAAGACTCTGTGAAGGGCCGTTTCACCGTCTCCAGAGACAATTCCA  180
V  88.7% (219/247)  IGHV3-33*01  137  ................A.................TA....C....C......C...........A......A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  D  T  L  Y  L  H  M  N  I  L  K  V  E  D  T  A  V  Y  Y  C  V  R  V  D  N  R  G  Y  P  
                    Query_11143  181  AGGATACCCTGTATCTGCATATGAACATCCTAAAGGTCGAAGACACGGCTGTTTATTACTGTGTGAGGGTCGATAATCGTGGATATCCCG  270
V  88.7% (219/247)  IGHV3-33*01  227  ..A.C..G...........A.......G...G.GA.C...G...........G..........C...-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD5-12*01  1    ------------------------------------------------------------------------------........----  8
J  91.3% (42/46)    IGHJ3*02     5    -----------------------------------------------------------------------------------------.  5

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_11143  271  CTTTTGACATCTGGGGCCAGGGGACAGTGGTCACCGTCTCCTCAG  315
J  91.3% (42/46)    IGHJ3*02     6    .......T...........A......A.............T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_58602

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11144  1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  87.0% (214/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_11144  91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCACCATCTCAGTAGACAAGTCCAAG  180
V  87.0% (214/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A................A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_11144  181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  87.0% (214/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_11144  271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_338153

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         335     4e-94
IGHD3-22*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-22*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTGGGT	TAGGGGTTAT	AAGGGTTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTGGGTTAGGGGTTATAAGGGTTTCTTTGACTAC	ARDPWVRGYKGFFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11145    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-30-3*01  47   ..............................................C...........................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  D  E  N  Y  K  Y  Y  T  D  S  L  K  G  *  F  T  I  S  R  D  N  S  
                    Query_11145    91   AGTGGGTGGCAGTTATCTCATATGATGAAAACTATAAATATTACACGGACTCCCTGAAGGGCTGATTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-30-3*01  137  ................A..........G..G.A.......C...G.A......G........C...........................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        R  N  T  L  Y  L  Q  M  N  T  L  T  L  D  D  T  A  V  Y  Y  C  A  R  D  P  W  V  R  G  Y  
                    Query_11145    181  GGAACACCCTGTATCTGCAGATGAACACCCTGACACTTGACGACACGGCTGTGTATTACTGTGCGAGAGATCCTTGGGTTAGGGGTTATA  270
V  92.8% (232/250)  IGHV3-30-3*01  227  A......G...........A.......G.....G.GC...G.............................--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-22*01    16   -------------------------------------------------------------------------------...T......-  25

                                        ---------------->                                  
                                        K  G  F  F  D  Y  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_11145    271  AGGGTTTCTTTGACTACTGGGGCCAGGGAAGTCTGGTCATTGTCTCCTCAG  321
J  90.9% (40/44)    IGHJ4*02       5    -------.......................CC.......CC..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_338152

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            361     4e-102
IGHD1-26*01                                                                                           14.1    8.9   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCG	GTGGGAG	TCACCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATGCGGTGGGAGTCACCCCCTACTTTGACTAC	ARDAVGVTPYFDY	269	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	41	4	0	91.1
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	49	2	0	96.1
CDR2-IMGT	128	154	27	26	1	0	96.3
FR3-IMGT	155	268	114	103	11	0	90.4
CDR3-IMGT (germline)	269	276	8	8	0	0	100
Total	N/A	N/A	275	253	22	0	92


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  L  V  S  R  N  G  A  A  W  N  W  I  R 
                    Query_11146  2    CTGGTGAAACCCACACAGACCCTCTCACTCACATGTGCCATCTCCGGGGACCTTGTCTCTAGGAACGGTGCTGCTTGGAATTGGATCAGG  91
V  92.0% (253/275)  IGHV6-1*01   31   ........G...T.G.................C..................AG.........C...A.............C.........  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  P  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  L  R  G  R 
                    Query_11146  92   CAGCCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATATTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTCTGAGAGGTCGA  181
V  92.0% (253/275)  IGHV6-1*01   121  ...T.....................................C....................................G...A.A.....  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  I  I  S  P  D  T  S  N  N  L  F  S  L  H  L  N  S  V  T  P  E  D  T  A  M  Y  Y  C  A 
                    Query_11146  182  ATAATCATCAGCCCAGACACTTCCAACAACCTCTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTATGTATTACTGTGCA  271
V  92.0% (253/275)  IGHV6-1*01   211  ....C.....A.........A.....G....AG...........G..............................G..............  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      ------------CDR3-IMGT-------------->                                  
                                       R  D  A  V  G  V  T  P  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11146  272  AGAGATGCGGTGGGAGTCACCCCCTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  341
V  92.0% (253/275)  IGHV6-1*01   301  .....-----------------------------------------------------------------  305
                                       R                                                                    
D  100.0% (7/7)     IGHD1-26*01  7    ---------.......------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    -----------------------.........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_338151

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	291	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	66	5	0	93
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	106	8	0	93
CDR3-IMGT (germline)	291	297	7	6	1	0	85.7
Total	N/A	N/A	291	268	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  
                    Query_11147  7    TGCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATC  96
V  92.1% (268/291)  IGHV5-51*01  5    .....................C........A.....................G.........A......C.........C.......GCT  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      H  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  
                    Query_11147  97   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCC  186
V  92.1% (268/291)  IGHV5-51*01  95   ....................................................G.......A.....G.......G....C.....C....  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  
                    Query_11147  187  CGTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCG  276
V  92.1% (268/291)  IGHV5-51*01  185  ................G........C...................................G.......G....................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------CDR3-IMGT----------->                                  
                                      A  L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_11147  277  CCTTGTATTATTGCGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  357
V  92.1% (268/291)  IGHV5-51*01  275  ..A.......C..T..G....------------------------------------------------------------  295
                                      A  M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   -----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    ------------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_338150

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            300     8e-84
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTTCTTCCCGGGGTCGC	TTGGGG	N/A	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTTCTTCCCGGGGTCGCTTGGGGCTAT	ARDVLPGVAWGY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  S  Y  W  M  N  W  V  R  Q  G  P  G  R  G  L  
                    Query_11148  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACTTCCTATTGGATGAACTGGGTCCGCCAGGGTCCAGGGAGGGGGCTGG  90
V  88.4% (221/250)  IGHV3-7*03   47   ..........................................G.AG...........G..............C........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  S  E  H  G  G  E  E  R  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_11148  91   AGTGGGTGGCCGCCATAAGCGAACATGGAGGTGAAGAGAGGTATGTGGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  88.4% (221/250)  IGHV3-7*03   137  ...........AA.....AGC..G.....A....GA.ATAC...........T....A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  H  M  N  N  L  R  A  E  D  T  A  T  Y  Y  C  A  R  D  V  L  P  G  V  A  
                    Query_11148  181  AGAATTCATTGTATCTGCACATGAACAACTTGAGAGCCGAGGACACGGCCACATATTACTGTGCGAGAGATGTTCTTCCCGGGGTCGCTT  270
V  88.4% (221/250)  IGHV3-7*03   227  ....C...C..........A.......G.C....................GTG.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  16   ----------------------------------------------------------------------------------------..  17

                                      ------->                                  
                                      W  G  Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_11148  271  GGGGCTATTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  312
D  100.0% (6/6)     IGHD3-16*01  18   ....--------------------------------------  21
J  94.7% (36/38)    IGHJ4*02     11   ----...C...........................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_58609

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            310     1e-86
IGHD1-26*01                                                                                           10.3    118  
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACTTTCGCTTCGC	ACTAC	CTACATT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACTTTCGCTTCGCACTACCTACATTTGGACGTC	ARTFASHYLHLDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	102	12	0	89.5
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T  T  N  Q  W  W  T  W  V  R  Q  P  P  G  R  G  L 
                    Query_11149  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCACTAATCAGTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAGGGGGCTG  90
V  90.2% (222/246)  IGHV4-4*01   49   ........................................G..G..G.A.C.......G.......................A.......  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  F  P  N  G  N  T  N  Y  S  P  S  L  K  S  R  L  T  I  S  M  A  K  S  K 
                    Query_11149  91   GAGTGGATTGGGGAAATTTTTCCTAATGGGAACACCAACTACAGCCCGTCCCTCAAGAGTCGACTCACCATTTCAATGGCTAAGTCCAAG  180
V  90.2% (222/246)  IGHV4-4*01   139  .................C.A..A..G.....G...........A...................G.......A...G.A.AC.........  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  V  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  T  F  A  S  H  Y  L  H 
                    Query_11149  181  AACCAGGTCTCCCTGAAACTTAACTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAACTTTCGCTTCGCACTACCTACAT  270
V  90.2% (222/246)  IGHV4-4*01   229  ......T..........G..G.G................................G..........------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (5/5)     IGHD1-26*01  16   -------------------------------------------------------------------------------.....------  20

                                      -------->                              
                                       L  D  V  W  G  Q  G  T  T  V  S  V  S 
                    Query_11149  271  TTGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCC  309
J  97.4% (37/38)    IGHJ6*02     22   -..............................C.......  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_58608

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         297     7e-83
IGHD2-2*01                                                                                            10.3    121  
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CAAGGGCACC	AGTAG	GGTTGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGACAAGGGCACCAGTAGGGTTGGGTGGTTCGACCCC	ARDKGTSRVGWFDP	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	253	8	7	1	0	87.5
Total	N/A	N/A	250	220	30	0	88


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  V  V  S  G  D  S  I  S  S  G  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  A  
                    Query_11150    4    CCCTGAGACTCTCCTGCGTTGTGTCTGGTGACTCCATCAGCAGCGGTGGTTACTACTGGAGTTGGCTCCGCCAGCCCCCAGGGAAGGCCC  93
V  88.0% (220/250)  IGHV4-30-4*01  50   .....TCC...A.....AC...C.......G............T....A................A.....................G..  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        P  E  W  I  G  Y  F  Y  Y  G  G  N  T  Y  Y  N  P  S  L  E  S  R  T  S  I  S  V  D  A  S  
                    Query_11150    94   CGGAATGGATTGGGTACTTCTATTATGGTGGGAACACCTACTACAACCCGTCCCTCGAGAGTCGAACTTCCATATCAGTAGACGCGTCCA  183
V  88.0% (220/250)  IGHV4-30-4*01  140  T...G............A.......CA......G......................A........GT.A..............A......  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                        K  N  L  F  S  L  N  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  K  G  T  S  R  V  
                    Query_11150    184  AGAACCTGTTCTCCCTGAACTTGACCTCTGTGACTGCCGCAGACACGGCCGTCTATTACTGCGCCAGGGACAAGGGCACCAGTAGGGTTG  273
V  88.0% (220/250)  IGHV4-30-4*01  230  ......A............GC...G...........................G........T.....A..--------------------  299
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-2*01     11   --------------------------------------------------------------------------------.....-----  15

                                        ------------->                                  
                                        G  W  F  D  P  W  G  Q  G  V  L  V  A  V  S  S  
                    Query_11150    274  GGTGGTTCGACCCCTGGGGCCAGGGAGTCCTCGTCGCCGTCTCCTCAG  321
J  91.3% (42/46)    IGHJ5*02       6    --........................AC...G...A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_117921

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            382     4e-108
IGHD1-26*01                                                                                           12.2    35    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	267	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y
                    Query_11151  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACCACTTA  90
V  92.1% (267/290)  IGHV1-8*01   6    ..................................................................T........C..........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F  A  Q
                    Query_11151  91   TGATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTTGCACA  180
V  92.1% (267/290)  IGHV1-8*01   96   .................................A..G..............A..............C.G...T..........A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D  T  A
                    Query_11151  181  GAGATTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGACACGGC  270
V  92.1% (267/290)  IGHV1-8*01   186  ..AG...C............................C.....A.................GC............G..C..AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_11151  271  CATATATTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  352
V  92.1% (267/290)  IGHV1-8*01   276  .G.G................--------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   -----------------------------...G.....--------------------------------------------  18
J  100.0% (40/40)   IGHJ5*02     11   ------------------------------------------........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_117920

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            377     8e-107
IGHD3-22*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTG	ATTACTATGATAGTAGTGGTTA	CCCA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTGATTACTATGATAGTAGTGGTTACCCAGACTAC	ASLDYYDSSGYPDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	114	0	0	100
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	243	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11152  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  99.2% (243/245)  IGHV4-4*02   49   ..............................................G...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_11152  91   GAGTGGATTGGGGAAATCTATCATGGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  99.2% (243/245)  IGHV4-4*02   139  ........................A.................................................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  D  Y  Y  D  S  S  G 
                    Query_11152  181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGCCTTGATTACTATGATAGTAGTGGT  270
V  99.2% (243/245)  IGHV4-4*02   229  .................................................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (22/22)   IGHD3-22*01  3    ----------------------------------------------------------------------....................  22

                                      ----------->                                  
                                       Y  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11152  271  TACCCAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (22/22)   IGHD3-22*01  23   ..--------------------------------------------  24
J  100.0% (40/40)   IGHJ4*02     9    ------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_117927

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           313     1e-87
IGHD3-22*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCGTGCTGTTA	ACTATGATAGTGGTG	ATTCCGGTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CGTGCTGTTAACTATGATAGTGGTGATTCCGGTTGGTACTTTGACTAC	RAVNYDSGDSGWYFDY	230	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	228	113	109	4	0	96.5
Total	N/A	N/A	216	208	8	0	96.3


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_11153  13   GTCTGGATTCACTTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  96.3% (208/216)  IGHV3-33*01  72   ............C.......G.....................................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  E  K  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  S  K  R  T  L  Y  L  Q  M  N
                    Query_11153  103  TGGAAGTGAAAAATACTATGCAGACTCCTTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGCGCACACTGTATCTGCAAATGAA  192
V  96.3% (208/216)  IGHV3-33*01  162  .......A.T..................G......................................AA...G.................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-------------------CDR3-IMGT------------------>     
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  R  A  V  N  Y  D  S  G  D  S  G  W  Y  F  D  Y  W  G
                    Query_11153  193  CAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGCCGTGCTGTTAACTATGATAGTGGTGATTCCGGTTGGTACTTTGACTACTGGGG  282
V  96.3% (208/216)  IGHV3-33*01  252  ....................................------------------------------------------------------  287
                                        S  L  R  A  E  D  T  A  V  Y  Y                                                         
D  93.3% (14/15)    IGHD3-22*01  6    -----------------------------------------------...........A...----------------------------  20
J  100.0% (46/46)   IGHJ4*02     3    -------------------------------------------------------------------------.................  19

                                                                   
                                        Q  G  T  L  V  T  V  S  S  
                    Query_11153  283  CCAGGGAACCCTGGTCACCGTCTCCTCAG  311
J  100.0% (46/46)   IGHJ4*02     20   .............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_117926

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           294     6e-82
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GATAG	N/A	N/A	GTGCGGGATGGCAACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGATAGGTGCGGGATGGCAACCTGACTAC	VIGAGWQPDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	5	2	0	71.4
Total	N/A	N/A	244	216	28	0	88.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  S  G  Y  Y  L  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11154  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTGAGTGGTTATTATTTGAACTGGATCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  88.5% (216/244)  IGHV4-59*01  49   ....................................A.C...A....C..C.G..G.........G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  D  L  I  S  Y  T  G  S  T  N  Y  N  P  S  L  Q  S  R  V  I  I  S  V  D  T  S  K  N 
                    Query_11154  91   TGGCTTGATTTAATCTCTTACACCGGGAGTACCAACTACAACCCCTCCCTCCAGAGTCGAGTCATCATATCGGTAGACACGTCCAAGAAC  180
V  88.5% (216/244)  IGHV4-59*01  139  ...A...GG.AT....A.....GT.....C.....................A............C......A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  V  I  G  A  G  W  Q  P  D  Y  W 
                    Query_11154  181  CAGTTCTCCCTGAGGTTGAGCTCTGTGACCGCTGCGGACACGGCCCTATATTATTGTGTGATAGGTGCGGGATGGCAACCTGACTACTGG  270
V  88.5% (216/244)  IGHV4-59*01  229  .............A.C.............................G.G.....C....C..G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  95.1% (39/41)    IGHJ4*02     8    --------------------------------------------------------------------------------..........  17

                                                                     
                                       G  P  G  T  L  V  T  V  S  S  
                    Query_11154  271  GGCCCGGGAACGCTGGTCACCGTCTCCTCAG  301
J  95.1% (39/41)    IGHJ4*02     18   ....A......C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_117925

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           316     2e-88
IGHD6-13*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  A  L  E  
                    Query_11155  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGCACTGGAGT  93
V  91.4% (223/244)  IGHV4-59*08  50   .....TCC...A..............................G......................................G........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  S  I  F  Y  T  G  T  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_11155  94   GGATCGGGTCTATCTTTTACACTGGGACCACCAACTACGACCCCTCTCTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGAACC  183
V  91.4% (223/244)  IGHV4-59*08  140  ....T....A.....A.....G.....G..........A.......C....................A.....A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  R  V  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  H  R  A  A  A  G  P  
                    Query_11155  184  AGTTCTCCCTGAGAGTGACCTCTCTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATCCCCATAGAGCAGCAGCTGGCCCCT  273
V  91.4% (223/244)  IGHV4-59*08  230  ............AGC...G....G......................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (12/12)   IGHD6-13*01  7    -------------------------------------------------------------------------............-----  18
J  93.2% (41/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  D  N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_11155  274  TTGACAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  315
J  93.2% (41/44)    IGHJ4*02     7    .....T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_338158

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CAT	TTACTATGA	CCCCACGCGGCCTGAGTCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACATTTACTATGACCCCACGCGGCCTGAGTCT	AKDIYYDPTRPES	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  N  Y  A  M  T  W  V  R  Q  A  P  G  N  G  L  
                    Query_11156  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGGCAATTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAATGGCCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   .........................................A...GC..........G........................G..G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  S  G  T  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_11156  91   AGTGGGTCTCAAGTATTAGTGGGAGTGGTTCTGGCACAAAATACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATCCCG  180
V  92.8% (232/250)  IGHV3-23*01  137  ...........GC.........T......GG.A.....T.C.............................................T..A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      A  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  I  Y  Y  D  P  T  
                    Query_11156  181  CGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAAAGACATTTACTATGACCCCACGC  270
V  92.8% (232/250)  IGHV3-23*01  227  A...................................................A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD3-22*01  4    -------------------------------------------------------------------------.........--------  12

                                      ---------->                                  
                                      R  P  E  S  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_11156  271  GGCCTGAGTCTTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  315
J  97.1% (33/34)    IGHJ4*02     15   -----------.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_330302

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCAA	CCGTCCC	GGGTATTGCAATGACTGG	ACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACCGTCCCGGGTATTGCAATGACTGGACCTGACTAC	ATVPGIAMTGPDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	225	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  R  S  Y  W  M  N  W  V  R  Q  V  P  G  R  G  L  
                    Query_11157  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGTTTCACGTTCAGGAGTTATTGGATGAACTGGGTCCGCCAAGTTCCAGGGAGGGGGCTGG  90
V  91.5% (225/246)  IGHV3-74*01  47   .....................C.........A.....C.....T..C..C......C...............C........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  S  G  D  G  T  S  T  S  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11157  91   TGTGGGTCTCACGCATTAGTGGTGATGGGACTAGCACAAGTTACGCGGACGCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.5% (225/246)  IGHV3-74*01  137  .............T....A.A.........G.........C.........T.......................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  K  S  L  R  A  D  D  T  A  V  Y  F  C  A  T  V  P  G  I  A  M  T  
                    Query_11157  181  AGAACACGCTGTATTTACAAATGAAGAGTCTGAGAGCCGACGACACGGCTGTCTATTTCTGTGCAACCGTCCCGGGTATTGCAATGACTG  270
V  91.5% (225/246)  IGHV3-74*01  227  ..............C.G........C..............G...........G....A........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  83.3% (15/18)    IGHD6-19*01  1    -------------------------------------------------------------------------......A...G..G...  17

                                      ---------->                                  
                                      G  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11157  271  GACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
D  83.3% (15/18)    IGHD6-19*01  18   .--------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ----.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_330303

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           310     1e-86
IGHD1-26*01                                                                                           12.2    32   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTAGACCA	AGTGGG	GCTGCGGGGGAACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTAGACCAAGTGGGGCTGCGGGGGAACAACTTTGACTAC	ARHVDQVGLRGNNFDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	22	8	0	73.3
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  I  T  L  G  R  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  
                    Query_11158  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTCCATCACCCTTGGAAGATACTATTGGGGCTGGCTCCGCCAGCCCCCCGGGAAGGGGC  93
V  89.6% (224/250)  IGHV4-39*01  50   .....TCC...A....C.............G........G.AG.A.T..T.....C.........A.............A..........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  A  S  I  H  Y  S  G  S  P  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_11158  94   TGGAGTGGATTGCGAGTATTCATTACAGTGGGAGCCCCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCCGTAGACACGTCCA  183
V  89.6% (224/250)  IGHV4-39*01  140  ............G......CT....T.........A.....................................A................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  H  F  S  L  R  L  R  S  V  T  A  S  D  T  A  V  Y  Y  C  A  R  H  V  D  Q  V  G  L  
                    Query_11158  184  AGAACCACTTCTCCCTGAGGCTGAGGTCTGTGACCGCCTCAGACACGGCTGTATATTACTGTGCGAGACATGTAGACCAAGTGGGGCTGC  273
V  89.6% (224/250)  IGHV4-39*01  230  .......G..........A......C............G.............G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-26*01  6    -------------------------------------------------------------------------------......-----  11

                                      T------------------>                                  
                                      R  G  N  N  F  D  Y  W  G  Q  G  S  L  A  T  V  S  S  
                    Query_11158  274  GGGGGAACAACTTTGACTACTGGGGCCAGGGAAGTCTGGCCACCGTCTCCTCAG  327
J  93.3% (42/45)    IGHJ4*02     4    ---------........................CC....T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_84277

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           438     5e-125
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ACCCTCGG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTCGGTGCTCTTGATATC	ARTLGALDI	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	284	4	0	98.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_11159  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTAT  91
V  98.6% (284/288)  IGHV1-18*01  7    ..........................................................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_11159  92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAATTATGCACAG  181
V  98.6% (284/288)  IGHV1-18*01  97   ...................................G.........................C..................C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_11159  182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  98.6% (284/288)  IGHV1-18*01  187  ...C......................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------CDR3-IMGT-------->                                  
                                       V  Y  Y  C  A  R  T  L  G  A  L  D  I  W  G  Q  G  A  M  V  T  V  S  S  
                    Query_11159  272  GTGTATTACTGTGCGAGAACCCTCGGTGCTCTTGATATCTGGGGCCAAGGGGCAATGGTCACCGTCTCTTCAG  344
V  98.6% (284/288)  IGHV1-18*01  277  ..................-------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                        
J  95.7% (45/47)    IGHJ3*02     4    --------------------------....T....................A.....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_84276

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           299     3e-83
IGHD1-26*01                                                                                           12.2    35   
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTCTGGATCTCT	TGGGAG	GCGACACTGACGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCTGGATCTCTTGGGAGGCGACACTGACGGC	ATLDLLGGDTDG	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	43	8	0	84.3
CDR2-IMGT	146	169	24	16	8	0	66.7
FR3-IMGT	170	283	114	94	20	0	82.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	239	48	0	83.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  A  G  S  T  V  K  V  S  C  K  T  S  R  A  T  F  S  S  N
                    Query_11160  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGGCTGGGTCCACGGTGAAGGTCTCCTGCAAGACTTCCAGGGCCACCTTCAGCAGCAA  90
V  83.3% (239/287)  IGHV1-69*06  6    ..................G...............C........T....................G....TG.A.G.............T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        T  F  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  A  I  I  P  T  L  R  T  T  N  Y  A  Q
                    Query_11160  91   CACCTTCACTTGGGTGCGCCAGGCCCCGGGACAAGGGCTTGAGTGGATGGGGGCCATCATCCCCACCCTGCGCACGACAAACTACGCACA  180
V  83.3% (239/287)  IGHV1-69*06  96   TG.TA...GC........A........T.......................A.GG........T.T.T.TG.T..AG.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  R  S  S  S  T  S  Y  M  G  L  S  G  L  T  P  E  D  T  A
                    Query_11160  181  GAGGTTCCAAGGCAGAGTCACCATAACCGCGGACAGGTCTTCGAGTACAAGTTATATGGGACTGAGCGGTCTGACTCCTGAGGACACGGC  270
V  83.3% (239/287)  IGHV1-69*06  186  ..A......G...........G..T..........AA..CA....C...GCC..C....AG......A.C....GAT.............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  T  L  D  L  L  G  G  D  T  D  G  W  G  P  G  T  L  V  T  V  S  S  
                    Query_11160  271  CGTGTATTACTGTGCGACTCTGGATCTCTTGGGAGGCGACACTGACGGCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  353
V  83.3% (239/287)  IGHV1-69*06  276  .................------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                    
D  100.0% (6/6)     IGHD1-26*01  8    -----------------------------......------------------------------------------------  13
J  97.1% (34/35)    IGHJ4*02     14   ------------------------------------------------........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_84271

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            322     2e-90
IGHD3-9*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAAGAGCGGTACGCATTGAT	ACTGTTTATTA	CGAGGGGCCTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAAGAGCGGTACGCATTGATACTGTTTATTACGAGGGGCCTCCTGACTAC	ATRAVRIDTVYYEGPPDY	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  N  S  N  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_11161  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGTCCATCAGTAATAGTAACTGGTGGACTTGGATTCGCCAGCCCCCAGGAAAGGGGCTG  90
V  92.2% (225/244)  IGHV4-4*01   49   ................................C........C.G..............G....G.C..............G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  I  D  S  G  S  T  N  Y  N  P  S  L  M  S  R  V  I  I  S  L  D  K  S  K 
                    Query_11161  91   GAGTGGATTGGGGAAATTATTGATAGTGGGAGCACCAACTACAACCCGTCCCTCATGAGTCGAGTCATCATCTCACTAGACAAGTCCAAG  180
V  92.2% (225/244)  IGHV4-4*01   139  .................CTA.C.................................A...........C...A...G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                       N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  T  R  A  V  R  I  D  T  V 
                    Query_11161  181  AATCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGACAAGAGCGGTACGCATTGATACTGTT  270
V  92.2% (225/244)  IGHV4-4*01   229  ..C..............G....G................................G........--------------------------  292
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  90.9% (10/11)    IGHD3-9*01   17   ------------------------------------------------------------------------------------....G.  22

                                      GT--------------------->                                  
                                       Y  Y  E  G  P  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11161  271  TATTACGAGGGGCCTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  90.9% (10/11)    IGHD3-9*01   23   .....-----------------------------------------------------  27
J  100.0% (41/41)   IGHJ4*02     8    -----------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_330307

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-9*01                                                                                            14.1    8.4  
IGHJ2*01                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTACGC	TTTTGAC	GGCA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTACGCTTTTGACGGCAACTGGTACTTCGATCTC	AREYAFDGNWYFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11162  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGCCATGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ...............................................T...................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  T  T  G  G  S  T  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  T  S  
                    Query_11162  91   AGTGGGTTTCAGCTATTACTACTACTGGTGGTAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACACTTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  .......C..........G.GG..G.............T................................A............A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  M  E  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  Y  A  F  D  G  N  
                    Query_11162  181  AGAACACGTTGTCTATGGAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAGAGAGTACGCTTTTGACGGCAACT  270
V  93.6% (234/250)  IGHV3-23*01  227  ........C...A.C..C......................G.........................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-9*01   12   ----------------------------------------------------------------------------.......-------  18
J  98.0% (50/51)    IGHJ2*01     3    ---------------------------------------------------------------------------------------...  5

                                      ------------->                                  
                                      W  Y  F  D  L  W  G  R  G  S  L  V  T  V  S  S  
                    Query_11162  271  GGTACTTCGATCTCTGGGGCCGTGGCTCCCTGGTCACTGTCTCCTCAG  318
J  98.0% (50/51)    IGHJ2*01     6    ..........................A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_84273

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           428     3e-122
IGHD6-19*01                                                                                           16.1    2.6   
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGTGGGGAAACAGA	AGTGGCTG	CCA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCC	ARLRGETEVAANNWFDP	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	69	2	0	97.2
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	113	1	0	99.1
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	290	282	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  M  G  S  G  Y  T  F  A  G  
                    Query_11163  5    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTATGGGATCTGGATACACCTTTGCCGGCT  94
V  97.2% (282/290)  IGHV5-51*03  5    ...............................................................A...T..........G....A..A...  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  D  T  R  Y  S  
                    Query_11163  95   ACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCGTCTATCCTGGTGACTCTGATACCAGATACAGCC  184
V  97.2% (282/290)  IGHV5-51*03  95   .........G..............................................A.................................  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_11163  185  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCG  274
V  97.2% (282/290)  IGHV5-51*03  185  ........................................C.................................................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><--------------------CDR3-IMGT-------------------->                         
                                      A  M  Y  Y  C  A  R  L  R  G  E  T  E  V  A  A  N  N  W  F  D  P  W  G  Q  G  T  L  V  T  
                    Query_11163  275  CCATGTATTACTGTGCGAGACTTCGTGGGGAAACAGAAGTGGCTGCCAACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCG  364
V  97.2% (282/290)  IGHV5-51*03  275  ....................----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (8/8)     IGHD6-19*01  10   -------------------------------------........---------------------------------------------  17
J  100.0% (50/50)   IGHJ5*02     1    ------------------------------------------------..........................................  42

                                              
                                      V  S  S 
                    Query_11163  365  TCTCCTCA  372
J  100.0% (50/50)   IGHJ5*02     43   ........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_147683

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           382     4e-108
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACAGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	265	21	0	92.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_11164  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  92.7% (265/286)  IGHV5-51*01  6    ..............................A...................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  R  G  L  E  L  M  G  L  I  Y  P  G  D  S  D  T  W  Y  S  P
                    Query_11164  91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCGAGGCCTGGAGTTGATGGGGCTCATCTATCCTGGTGACTCTGATACCTGGTACAGTCC  180
V  92.7% (265/286)  IGHV5-51*01  96   ......................A........AA...........G.......A..........................A.A.....C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  S  Q  G  Q  V  I  I  S  A  D  K  S  V  T  S  A  Y  L  Q  W  T  T  L  R  A  S  D  T  A
                    Query_11164  181  GTCCTCCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCACCTCCGCCTACCTGCAGTGGACCACCCTGAGGGCCTCGGACACCGC  270
V  92.7% (265/286)  IGHV5-51*01  186  .....T..............C...................A...G.A..................G..G.....A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11164  271  CATTTACTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACAGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  353
V  92.7% (265/286)  IGHV5-51*01  276  ...G..T.........-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------.................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_147682

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            417     6e-119
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	G	GGGTAT	GACGCTCCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGTATGACGCTCCGTTTGAGTAC	ARGGYDAPFEY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  D  T  F  T  S  Y
                    Query_11165  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCACCAGTTA  90
V  95.9% (279/291)  IGHV1-8*01   6    ..................G......................................................T................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  N  W  V  R  Q  A  T  G  Q  G  L  V  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_11165  91   TTATATCAACTGGGTGCGGCAGGCCACAGGACAAGGGCTTGTCTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACA  180
V  95.9% (279/291)  IGHV1-8*01   96   .G................A........T.............AG...............................................  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  V  T  G  D  T  S  I  S  T  V  Y  M  E  L  S  S  L  K  S  E  D  T  A
                    Query_11165  181  GAAGTTCCAGGGCAGAGTCACCGTGACCGGGGACACCTCCATAAGCACAGTCTACATGGAGCTGAGCAGCCTGAAATCTGAGGACACGGC  270
V  95.9% (279/291)  IGHV1-8*01   186  ......................A.....A..A..................C.......................G...............  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        V  Y  Y  C  A  R  G  G  Y  D  A  P  F  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11165  271  CGTGTATTACTGTGCGAGAGGGGGGTATGACGCTCCGTTTGAGTACTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  350
V  95.9% (279/291)  IGHV1-8*01   276  .....................-----------------------------------------------------------  296
                                        V  Y  Y  C  A  R  G                                                           
D  100.0% (6/6)     IGHD6-13*01  1    ----------------------......----------------------------------------------------  6
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------.....C....................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_330308

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     1e-124
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	285	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_11166  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  97.9% (285/291)  IGHV5-51*01  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_11166  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACTAGATACAGCCC  180
V  97.9% (285/291)  IGHV5-51*01  96   ............................................................T.................C...........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_11166  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (285/291)  IGHV5-51*01  186  .............................................C...........G......A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_11166  271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  97.9% (285/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_11166  361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_147680

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            313     1e-87
IGHD3-10*01                                                                                           12.2    32   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GGGGAG	GGGGAATG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGAGGGGGAATGTACTACTTCCACGGTTTGGACGTG	ARGGGGMYYFHGLDV	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	3	3	80
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	227	20	3	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  T  T  N  W  W  T  W  V  R  Q  P  P  G  K  G 
                    Query_11167  1    ACCCTGTCCCTCACCTGCGCTATCTCTGGTGACTCCGTCAGCAGTACGACTAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGG  90
V  90.8% (227/250)  IGHV4-4*02   49   .....................G.........G....A.........G---...........G............................  135
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S     N  W  W  S  W  V  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       P  Q  W  I  G  E  I  L  H  T  G  S  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  I  H  K  S 
                    Query_11167  91   CCGCAATGGATTGGGGAAATCCTTCATACTGGGAGTACCAACTACGACCCGTCCCTCAAGAGTCGAGTCACCATATCAATACACAAGTCC  180
V  90.8% (227/250)  IGHV4-4*02   136  .T.G.G...............TA.....G......C.........A................................G..G........  225
                                       L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       E  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  G  M  Y  Y 
                    Query_11167  181  GAGAATCAGTTTTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGCGAGGGGGAGGGGGAATGTACTAC  270
V  90.8% (227/250)  IGHV4-4*02   226  A....C.....C.............G........................................A...--------------------  295
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01  16   ----------------------------------------------------------------------......--------------  21
J  93.0% (53/57)    IGHJ6*02     6    ------------------------------------------------------------------------------------......  11

                                      ----------------->                                 
                                       F  H  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11167  271  TTCCACGGTTTGGACGTGTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  321
J  93.0% (53/57)    IGHJ6*02     12   .A.T.....A.......C.................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_147687

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           318     6e-89
IGHD2-15*01                                                                                           10.3    119  
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	CCCGCGTTGC	GGTAG	A	TGATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGCCCGCGTTGCGGTAGATGATTCTTTTGATCTC	ARARVAVDDSFDL	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  S  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11168  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACTAGTCACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-74*01  47   ..........................................G...CT..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  N  D  G  S  L  T  H  Y  A  D  S  V  R  G  R  V  T  F  S  R  D  N  T  
                    Query_11168  91   TGTGGGTCTCACGTATTAATAATGATGGGAGTCTCACACACTATGCGGACTCCGTCAGGGGCCGAGTCACCTTCTCCAGAGACAACACCA  180
V  90.8% (226/249)  IGHV3-74*01  137  .....................G..........AG....AG...C...........G.A.......T.....A..............G...  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  R  T  L  Y  L  Q  M  T  S  L  R  A  D  D  T  A  V  Y  F  C  A  R  A  R  V  A  V  D  D  
                    Query_11168  181  AGAGAACACTGTATCTGCAGATGACCAGTCTGAGAGCCGACGACACGGCTGTCTATTTCTGTGCCAGAGCCCGCGTTGCGGTAGATGATT  270
V  90.8% (226/249)  IGHV3-74*01  227  ...AC..G...........A....A...............G...........G....A......A....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-15*01  17   -------------------------------------------------------------------------------.....------  21
J  92.0% (46/50)    IGHJ3*01     1    -------------------------------------------------------------------------------------....G  5

                                      ---------->                                  
                                      S  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11168  271  CTTTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCCTCAG  315
J  92.0% (46/50)    IGHJ3*01     6    ........G.................A.............T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_147686

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           322     2e-90
IGHD2-21*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGCCCGCTGCCC	GTGGTGGGTGCTAT	GGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATCAGCCCGCTGCCCGTGGTGGGTGCTATGGCTTC	VRDQPAARGGCYGF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  L  R  S  H  W  M  H  W  V  R  Q  D  P  G  K  G  L  
                    Query_11169  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCCTCAGAAGCCACTGGATGCACTGGGTCCGCCAAGATCCAGGGAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-74*01  47   .....................C................T....T...T........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  A  R  I  N  F  D  G  S  S  T  S  Y  V  D  S  V  K  G  R  F  N  I  S  R  D  N  A  
                    Query_11169  91   CATGGGTCGCACGTATTAATTTTGATGGGAGTAGTACAAGTTATGTGGACTCCGTCAAGGGCCGATTCAACATTTCCAGAGACAACGCCA  180
V  91.2% (228/250)  IGHV3-74*01  137  TG......T...........AG............C.....C..C.C.........G.............C...C................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  G  V  Y  Y  C  V  R  D  Q  P  A  A  R  G  
                    Query_11169  181  AGAACACATTGTATCTGCAAATGAACAGTCTGAGAGTCGAGGACACGGGTGTGTATTACTGTGTAAGAGATCAGCCCGCTGCCCGTGGTG  270
V  91.2% (228/250)  IGHV3-74*01  227  .......GC...........................C...........C..............C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  85.7% (12/14)    IGHD2-21*01  12   ------------------------------------------------------------------------------------......  17

                                      ------------->                                  
                                      G  C  Y  G  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11169  271  GGTGCTATGGCTTCTGGGGCCAGGGAGCCCTTGTCACCGTCTCCTCAG  318
D  85.7% (12/14)    IGHD2-21*01  18   AT......----------------------------------------  25
J  94.3% (33/35)    IGHJ4*02     14   -------------.............A....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_147685

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           302     3e-84
IGHD2-2*01                                                                                            27.6    8e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	218	25	0	89.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E  
                    Query_11170  4    CCCTGAGACTCTCCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAGT  93
V  89.7% (218/243)  IGHV4-59*01  50   .....TCC...A................T..........G.AG.T............................A...A............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N  
                    Query_11170  94   GGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAATG  183
V  89.7% (218/243)  IGHV4-59*01  140  ..A....G...........C..T.....C..C..C.......................A..........................G..CC  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y  
                    Query_11170  184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTACT  273
V  89.7% (218/243)  IGHV4-59*01  230  ..............................CT..............G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  94.1% (16/17)    IGHD2-2*01   8    --------------------------------------------------------------------........T........-----  24
J  88.5% (46/52)    IGHJ6*02     11   -------------------------------------------------------------------------------------.....  15

                                      ------------->                                 
                                      Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_11170  274  ACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  320
J  88.5% (46/52)    IGHJ6*02     16   ..GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_276981

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           413     2e-117
IGHD5-18*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	GTGGACACACCTATGG	AGCCCGAACCGACCCCCATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGGACACACCTATGGAGCCCGAACCGACCCCCATCTTGACTAC	ARRGHTYGARTDPHLDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  I  F  R  T  Y
                    Query_11171  1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACATCTTTAGAACCTA  90
V  95.5% (277/290)  IGHV5-51*01  6    ....................C.............................A..........................G.....CC.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_11171  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  95.5% (277/290)  IGHV5-51*01  96   ........G.................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  H  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  P  D  P  A
                    Query_11171  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACCACTCCATTAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCCCGGACCCCGC  270
V  95.5% (277/290)  IGHV5-51*01  186  ..................................A.G.....C....................................T.....A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  A  R  R  G  H  T  Y  G  A  R  T  D  P  H  L  D  Y  W  G  Q  G  T  L  V  S  V
                    Query_11171  271  CATATATTACTGTGCGAGACGTGGACACACCTATGGAGCCCGAACCGACCCCCATCTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGT  360
V  95.5% (277/290)  IGHV5-51*01  276  ...G................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  87.5% (14/16)    IGHD5-18*01  1    --------------------.....T...G......------------------------------------------------------  16
J  97.6% (41/42)    IGHJ4*02     7    --------------------------------------------------------.............................A....  40

                                              
                                        S  S  
                    Query_11171  361  CTCCTCAG  368
J  97.6% (41/42)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_276980

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           338     4e-95
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	26	25	24	1	0	96
CDR1-IMGT	27	56	30	28	2	0	93.3
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	3	2	0	60
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                      <-------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT------
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G  L
                    Query_11172  2    CCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGGCT  91
V  93.9% (231/246)  IGHV4-39*01  51   .....................C.....................AG..............G..............................  140
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L

                                      ---------------><-----CDR2-IMGT-----><----------------------------------------------------
                                        E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  G  R  V  T  V  S  V  D  T  S  K
                    Query_11172  92   GGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGGGTCGAGTCACCGTATCTGTAGACACGTCCAA  181
V  93.9% (231/246)  IGHV4-39*01  141  ...................T..........................C.........A.A...........A....C..............  230
                                        E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K

                                      FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->        
                                        N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G  Q
                    Query_11172  182  GAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGCCA  271
V  93.9% (231/246)  IGHV4-39*01  231  ................A.......C................................C...G.G..------------------------  296
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                           
D  100.0% (7/7)     IGHD1-1*01   9    ------------------------------------------------------------------.......-----------------  15
J  100.0% (38/38)   IGHJ4*02     10   -----------------------------------------------------------------------------.............  22

                                                               
                                        G  T  L  V  T  V  S  S 
                    Query_11172  272  GGGAACCCTGGTCACCGTCTCCTCA  296
J  100.0% (38/38)   IGHJ4*02     23   .........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_276982

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            325     3e-91
IGHD3-3*01                                                                                            37.2    1e-06
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGCGACGTCCGGGTCC	TACGATTTTTGGAGTGGTT	CTGGTACTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGCGACGTCCGGGTCCTACGATTTTTGGAGTGGTTCTGGTACTCTTGACTAC	AREATSGSYDFWSGSGTLDY	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	102	12	0	89.5
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  T  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11173  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTAGTGGTACCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  90
V  91.9% (228/248)  IGHV4-4*02   49   ..................G...................C..C...A...A..............................G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  H  S  G  S  T  K  Y  N  T  S  P  R  S  R  V  T  I  S  V  D  R  S  N 
                    Query_11173  91   GAGTGGATTGGAGAAATCTCTCATAGTGGGAGCACCAAGTACAACACGTCCCCCAGGAGTCGAGTCACCATATCAGTAGACAGGTCGAAC  180
V  91.9% (228/248)  IGHV4-4*02   139  ...........G.......A..................C......C......T..A..........................A...C..G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------------CDR3
                                       K  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  T  S  G  S  Y  D 
                    Query_11173  181  AAGCAGTTCTCCCTGAGATTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGAGGCGACGTCCGGGTCCTACGAT  270
V  91.9% (228/248)  IGHV4-4*02   229  ..C.............AGC...G.............................................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (19/19)   IGHD3-3*01   5    ------------------------------------------------------------------------------------......  10

                                      -IMGT------------------------>                                  
                                       F  W  S  G  S  G  T  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_11173  271  TTTTGGAGTGGTTCTGGTACTCTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  334
D  100.0% (19/19)   IGHD3-3*01   11   .............---------------------------------------------------  23
J  97.6% (41/42)    IGHJ4*02     7    ----------------------.....................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_240969

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  R  L  E 
                    Query_11174  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG....T..............A....................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11174  91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.4% (228/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_11174  181  CAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  ...................G...........................G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_11174  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_276984

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           327     8e-92
IGHD7-27*01                                                                                           14.1    7.9  
IGHJ3*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD7-27*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	CCG	CTGGGGA	N/A	ATCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACCCGCTGGGGAATC	TTRWGI	249	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	24	6	0	80
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	231	22	0	91.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  F  S  C  A  A  S  G  F  G  F  S  D  T  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11175  1    GGTCCCTGAGATTCTCCTGTGCAGCCTCTGGGTTCGGCTTCAGTGACACCTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.3% (231/253)  IGHV3-15*01  47   .......T...C...................A...ACT......A..G...GG.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  V  R  T  K  T  E  G  G  T  T  D  Y  A  A  P  G  K  G  R  F  T  I  S  R  G  
                    Query_11175  91   AGTGGGTTGGCCGTGTTAGGACCAAAACTGAAGGCGGGACAACAGACTACGCTGCACCCGGCAAAGGCAGATTCACCATCTCAAGAGGTG  180
V  91.3% (231/253)  IGHV3-15*01  137  ..............A...AA.G.........T..T.........................TG.........................A..  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----CDR3-IMGT--->    
                                      D  S  E  S  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  R  W  G  I  W  
                    Query_11175  181  ATTCAGAAAGCACCCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACCCGCTGGGGAATCTGGG  270
V  91.3% (231/253)  IGHV3-15*01  227  .....A...A...G...........................................................-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (7/7)     IGHD7-27*01  5    ----------------------------------------------------------------------------.......-------  11
J  97.3% (36/37)    IGHJ3*02     14   -----------------------------------------------------------------------------------.......  20

                                                                    
                                      G  Q  G  T  M  V  T  V  S  S  
                    Query_11175  271  GCCAAGGGACGATGGTCACCGTCTCTTCAG  300
J  97.3% (36/37)    IGHJ3*02     21   ..........A...................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_276987

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           357     1e-100
IGHD1-26*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAGA	TCGGTTT	TATAGTGGGACCTACT	CT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCTCAGATCGGTTTTATAGTGGGACCTACTCTTTTGCCTTC	TSDRFYSGTYSFAF	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	242	14	0	94.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  P  S  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11176  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGACCCAGTTTCAGCAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.5% (242/256)  IGHV3-15*01  47   .......T.............C..........TT..C......T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  I  D  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_11176  91   AGTGGGTTGGCCGTATTAAAAGCAAAATTGATGGTGAGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  94.5% (242/256)  IGHV3-15*01  137  ...........................C........G.....................................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  N  T  L  Y  L  H  M  N  G  L  K  T  E  D  T  A  V  Y  Y  C  T  S  D  R  F  Y  S  
                    Query_11176  181  ATTCAAAAAACACGCTATATCTGCACATGAACGGCCTGAAAACCGAGGACACAGCCGTTTACTACTGTACCTCAGATCGGTTTTATAGTG  270
V  94.5% (242/256)  IGHV3-15*01  227  ................G........A......A.........................G..T.........A....--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  93.8% (15/16)    IGHD1-26*01  3    -----------------------------------------------------------------------------------.......  9

                                      IMGT--------------->                                  
                                      G  T  Y  S  F  A  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11176  271  GGACCTACTCTTTTGCCTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  93.8% (15/16)    IGHD1-26*01  10   ...G.....---------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -----------....A..A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_276986

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD1-1*01                                                                                            12.2    30   
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTT	TACAAC	GGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTTACAACGGGACTACTTTGACTAC	ARVLQRDYFDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  N  S  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11177  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAATAGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   ......................................C.G........A...............G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       Y  I  G  F  I  Y  Y  T  G  S  A  Y  Y  S  S  S  L  K  S  R  V  T  I  L  I  D  T  S  K  K 
                    Query_11177  91   TACATTGGATTTATCTATTACACTGGGAGCGCCTACTACAGTTCCTCCCTCAAGAGTCGAGTCACCATATTAATAGACACGTCCAAGAAG  180
V  91.4% (223/244)  IGHV4-59*01  139  .GG.....G.A...........G.......A..A......ACC...........................C.G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       E  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  L  Q  R  D  Y  F  D  Y 
                    Query_11177  181  GAATTCTCCCTGAAACTGAGCTCAGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTTTTACAACGGGACTACTTTGACTAC  270
V  91.4% (223/244)  IGHV4-59*01  229  C.G...........G........T........................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-1*01   3    -------------------------------------------------------------------......-----------------  8
J  100.0% (48/48)   IGHJ4*02     1    ----------------------------------------------------------------------------..............  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11177  271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (48/48)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_329010

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           327     9e-92
IGHD1-26*01                                                                                           14.1    8.6  
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	TGGGAGC	GCCAACTCTACACGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGGAGCGCCAACTCTACACGGCTACTACTACGGTATGGACGTC	ARVGAPTLHGYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  I  S  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11178  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCATTTCCTATGGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-21*01  47   ....................................C.....G.AG....A.......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  G  S  Y  T  Y  F  A  A  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_11178  91   AGTGGGTCTCGTCCATTAGTAGTAGTGGTTCTTACACATACTTCGCGGCCTCAGTAGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.0% (229/249)  IGHV3-21*01  137  ..........A...............A..AG.....T.....A...A.A......GA.................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  I  L  Q  M  D  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  G  A  P  T  L  H  
                    Query_11178  181  AGAACTCACTGATTCTGCAAATGGACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGTGGGAGCGCCAACTCTACACG  270
V  92.0% (229/249)  IGHV3-21*01  227  ...........TA..........A................G...........G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  8    ---------------------------------------------------------------------.......--------------  14

                                      GT-------------------->                                 
                                      G  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11178  271  GCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (55/55)   IGHJ6*02     8    -.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_329011

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*02                                                                                            374     8e-106
IGHD5-18*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*02	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACACA	CCCCCA	ATACAGCT	TATTTCCCGTGGACTACATACCATTTTCAA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACACCCCCAATACAGCTTATTTCCCGTGGACTACATACCATTTTCAATAC	AHTPNTAYFPWTTYHFQY	263	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	43	3	0	93.5
CDR1-IMGT	47	76	30	30	0	0	100
FR2-IMGT	77	127	51	47	4	0	92.2
CDR2-IMGT	128	148	21	20	1	0	95.2
FR3-IMGT	149	262	114	107	7	0	93.9
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	269	254	15	0	94.4


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  P  V  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R
                    Query_11179  1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCCCCGTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCG  90
V  94.4% (254/269)  IGHV2-5*02   30   ...........................G.........A..T.................................................  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  P  E  W  L  T  L  I  Y  W  E  D  D  K  R  Y  N  P  P  L  K  T  R  L  T
                    Query_11179  91   TCAGCCCCCAGGAAAGGCCCCGGAGTGGCTCACTCTCATTTATTGGGAGGATGATAAGCGCTACAACCCACCTCTGAAAACCAGGCTCAC  180
V  94.4% (254/269)  IGHV2-5*02   120  ....................T.........TG.A..............T................G....T.......G.G.........  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  T
                    Query_11179  181  CATCAGCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTAGACACAGCCACATACTACTGTGCACACAC  270
V  94.4% (254/269)  IGHV2-5*02   210  .....C......................................................G..............T.............-  298
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                      ---------------CDR3-IMGT--------------------->                                  
                                        P  N  T  A  Y  F  P  W  T  T  Y  H  F  Q  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11179  271  CCCCAATACAGCTTATTTCCCGTGGACTACATACCATTTTCAATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
D  100.0% (8/8)     IGHD5-18*01  5    -----........-------------------------------------------------------------------  12
J  100.0% (37/37)   IGHJ4*02     12   -------------------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_329012

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           318     6e-89
IGHD2-8*02                                                                                            18.0    0.60 
IGHJ5*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATTGTCGGTGTTGGC	TATTGCACTGGT	AGCAGTTGTTCCCCTCCGTCT	GACGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGTCGGTGTTGGCTATTGCACTGGTAGCAGTTGTTCCCCTCCGTCTGACGCC	ARIVGVGYCTGSSCSPPSDA	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  F  S  Y  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_11180  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGGTCCTTCAGTTATTACTACTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTGGAG  90
V  91.8% (223/243)  IGHV4-34*01  49   ..................G......A................GG............C...A.............A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  D  I  N  Q  S  G  S  T  N  Y  S  P  S  L  E  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_11180  91   TGGATTGGTGACATCAATCAAAGTGGAAGCACCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCATATCAATAGACACGTCGAAGAAC  180
V  91.8% (223/243)  IGHV4-34*01  139  ........G..A........T...................A..........A....................G..........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  K  S  L  A  A  A  D  T  A  V  Y  F  C  A  R  I  V  G  V  G  Y  C  T  G 
                    Query_11180  181  CAGTTCTCCCTGAAGCTGAAGTCTTTGGCCGCCGCGGACACGGCTGTCTATTTCTGTGCGAGAATTGTCGGTGTTGGCTATTGCACTGGT  270
V  91.8% (223/243)  IGHV4-34*01  229  ...................GC...G..A...................G....A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD2-8*02   5    ------------------------------------------------------------------------------.....T......  16

                                      GT------------------------>                                
                                       S  S  C  S  P  P  S  D  A  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11180  271  AGCAGTTGTTCCCCTCCGTCTGACGCCTGGGGCCAGGGAACTCTGGTCACCGTCTCCTC  329
J  94.7% (36/38)    IGHJ5*02     12   ---------------------...C................C.................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_329013

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_11181  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_11181  91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_11181  181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11181  271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_329014

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGACC	ARGDYDIGWT	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  P  T  C  T  V  S  G  G  S  I  L  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_11182  1    ACCCTGTCCCCCACCTGCACTGTCTCTGGTGGCTCCATCCTTACTCACTACTGGAGCTGGATTCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   ..........T............................AG..G.T................C.................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_11182  91   TGGATTGGATATATCTATTACAGTGGGACCACCACTTATAACCCTTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ........G...................G.....AC..C.....C..................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  T  W 
                    Query_11182  181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGACCTGG  270
V  91.4% (223/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (36/36)   IGHJ5*02     16   -------------------------------------------------------------------------------------.....  20

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_11182  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (36/36)   IGHJ5*02     21   ...............................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_329016

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           369     2e-104
IGHD3-3*01                                                                                            31.5    6e-05 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGAGACA	TATCACAATTTTTGGAGTGGTT	TTTCCAGAGGGGAACGGCCCACGTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGAGACATATCACAATTTTTGGAGTGGTTTTTCCAGAGGGGAACGGCCCACGTCTTACTACTTCTACGCTATGGACGTC	ARVETYHNFWSGFSRGERPTSYYFYAMDV	244	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  T  S  G  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_11183  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCACCAGTGGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  97.2% (243/250)  IGHV4-61*01  49   ........................................G........G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  V  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_11183  91   CTGGAGTGGATTGGGTATGTCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGCCGAGTCACCATATCACTAGACACGTCC  180
V  97.2% (243/250)  IGHV4-61*01  139  ..................A...........................................T...............G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       N  N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  E  T  Y  H  N  F 
                    Query_11183  181  AACAACCAGTTCTCCCTGAACCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTCGAGACATATCACAATTTT  270
V  97.2% (243/250)  IGHV4-61*01  229  ..G.................G.................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (20/22)    IGHD3-3*01   2    ------------------------------------------------------------------------------...T..G.....  13

                                      ------------CDR3-IMGT-------------------------------------->                              
                                       W  S  G  F  S  R  G  E  R  P  T  S  Y  Y  F  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_11183  271  TGGAGTGGTTTTTCCAGAGGGGAACGGCCCACGTCTTACTACTTCTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  360
D  90.9% (20/22)    IGHD3-3*01   14   ..........--------------------------------------------------------------------------------  23
J  96.5% (55/57)    IGHJ6*02     6    ------------------------------------.......A.....G........................................  59

                                         
                                       S 
                    Query_11183  361  TCA  363
J  96.5% (55/57)    IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_329017

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ3*01                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATA	CTACAGGTCG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACAGGTCGTGATCCTTTTGATTTC	ARVSREYYDTTGRDPFDF	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11184  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11184  91   AGTGGGTGGCAGTTATTTGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  96.8% (241/249)  IGHV3-33*01  137  ................A.....................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_11184  181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  96.8% (241/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  F  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_11184  271  CTACAGGTCGTGATCCTTTTGATTTCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
J  92.0% (46/50)    IGHJ3*01     1    ----------....G........G...................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_86695

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           294     6e-82
IGHD3-10*02                                                                                           21.8    0.040
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	N/A	GTATTAATATGTTC	AAGGCGTAT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGGTATTAATATGTTCAAGGCGTATTTCGACCCC	AGGINMFKAYFDP	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	217	29	0	88.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  V  S  R  N  Y  M  S  W  V  R  L  A  P  G  Q  G  L  
                    Query_11185  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCAGTGTCAGCCGCAACTACATGAGTTGGGTCCGCCTGGCTCCAGGACAGGGGCTGG  90
V  88.2% (217/246)  IGHV3-53*01  47   ....................................CC.....TA.............C..........A.........GA.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  I  Y  V  G  G  W  T  Y  Y  S  E  S  V  K  G  R  F  T  I  S  T  D  D  S  K  
                    Query_11185  91   AGTGGGTCTCGCTCATTTATGTCGGTGGTTGGACATATTACTCAGAGTCCGTGAAGGGCCGATTCACCATCTCCACAGACGATTCCAAGA  180
V  88.2% (217/246)  IGHV3-53*01  137  ..........AG.T......AG.......A.C.....C...G....C............................G....A.........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------CDR3-IMGT-------
                                      N  T  L  Y  L  Q  M  T  G  L  R  D  E  D  T  A  M  Y  Y  C  A  G  G  I  N  M  F  K  A  Y  
                    Query_11185  181  ACACCTTGTATCTTCAAATGACTGGCCTGAGAGACGAGGACACGGCCATGTATTATTGTGCGGGAGGTATTAATATGTTCAAGGCGTATT  270
V  88.2% (217/246)  IGHV3-53*01  227  ....GC...............ACA.........C.............G.......C......A...------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  92.9% (13/14)    IGHD3-10*02  1    ------------------------------------------------------------------......C.......----------  14
J  97.7% (42/43)    IGHJ5*02     9    -----------------------------------------------------------------------------------------.  9

                                      ------->                                  
                                      F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11185  271  TCGACCCCTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  312
J  97.7% (42/43)    IGHJ5*02     10   ...................A......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_86694

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           357     1e-100
IGHD2-2*01                                                                                            14.1    8.5   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTATCGACTGTACCAT	TACCACCTGC	CGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTATCGACTGTACCATTACCACCTGCCGTTTTGACTTC	ASLIDCTITTCRFDF	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  N  S  R  N  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_11186  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAACAGTCGTAATTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.0% (238/248)  IGHV4-39*01  49   ..................A.....................G....A...G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  N  Y  S  G  T  T  Y  Y  T  A  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_11186  91   CTGGAGTGGATTGGGAGTATCAATTATAGTGGGACCACCTACTACACCGCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  96.0% (238/248)  IGHV4-39*01  139  .....................T............G...........A.C.........................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  I  D  C  T  I  T 
                    Query_11186  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGCCTTATCGACTGTACCATTACC  270
V  96.0% (238/248)  IGHV4-39*01  229  ...........................................................C........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.0% (9/10)     IGHD2-2*01   16   --------------------------------------------------------------------------------------....  19

                                      ----------------->                                  
                                       T  C  R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11186  271  ACCTGCCGTTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  90.0% (9/10)     IGHD2-2*01   20   .G....----------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_86697

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           378     3e-107
IGHD3-16*01                                                                                           14.1    9.4   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGCTG	GGGGGAG	CCCAGGT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTGGGGGGAGCCCAGGTCTACGCTATGGACGTC	ARGLGGAQVYAMDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	265	23	0	92


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  A  G  G  T  F  S  S  Y
                    Query_11187  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTGCTGGAGGCACCTTCAGCAGTTA  90
V  92.0% (265/288)  IGHV1-69*01  6    ..................G................................................T...................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        P  I  S  W  V  R  L  A  P  G  Q  G  L  E  W  M  G  G  I  I  L  I  F  R  T  A  N  Y  P  Q
                    Query_11187  91   TCCTATCAGTTGGGTGCGACTGGCCCCTGGACAAGGGCTTGAGTGGATGGGCGGTATCATCCTTATCTTTCGAACAGCAAACTACCCACA  180
V  92.0% (265/288)  IGHV1-69*01  96   .G.......C..........A..............................A..G.......C.......G.T............G....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  S  A  D  A  S  T  N  T  A  Y  M  E  L  R  S  L  T  S  E  D  T  A
                    Query_11187  181  GAAGTTCCAGGGCAGAGTCACGATTTCCGCGGACGCCTCCACGAACACAGCCTACATGGAACTGAGGAGTCTGACATCTGAGGACACGGC  270
V  92.0% (265/288)  IGHV1-69*01  186  .........................A.........AA.......G...............G.....C..C....G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                 
                                        V  Y  Y  F  A  R  G  L  G  G  A  Q  V  Y  A  M  D  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_11187  271  GGTCTATTACTTTGCGAGGGGGCTGGGGGGAGCCCAGGTCTACGCTATGGACGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCCTCA  358
V  92.0% (265/288)  IGHV1-69*01  276  C..G.......G......----------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                         
D  100.0% (7/7)     IGHD3-16*01  18   -------------------------.......--------------------------------------------------------  24
J  95.9% (47/49)    IGHJ6*02     14   ---------------------------------------.....G.........................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_86696

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           321     6e-90
IGHD2-15*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGT	GGATATTGTAGTGG	CTTTGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTGGATATTGTAGTGGCTTTGGTTGACTCC	AKDVDIVVALVDS	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	50	1	0	98
CDR2-IMGT	102	125	24	21	3	0	87.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	233	219	14	0	94


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 
                    Query_11188  15   TGTGCAGCCTCTGGATTCACCTTTAGCAATTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGGTATT  104
V  94.0% (219/233)  IGHV3-23*01  64   ............................GC.......................................................C....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  S  G  L  T  T  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  Q  S  K  N  T  L  Y  P 
                    Query_11188  105  AGTGGTAGTGGTCTTACCACATACTACGCAGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACCAATCCAAGAACACCCTGTATCCG  194
V  94.0% (219/233)  IGHV3-23*01  154  ............GG..G......................A.......G..................A.T...........G.......T.  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------CDR3-IMGT-------------->      
                                       Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  V  D  I  V  V  A  L  V  D  S  W  G 
                    Query_11188  195  CAAATGAGCAGCCTGAGGGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATGTGGATATTGTAGTGGCTTTGGTTGACTCCTGGGGC  284
V  94.0% (219/233)  IGHV3-23*01  244  .......A.........A...................................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (14/14)   IGHD2-15*01  2    --------------------------------------------------------..............--------------------  15
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------......A.......  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_11188  285  CAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_86690

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD4-17*01                                                                                           14.1    8.4  
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGAATAC	AG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGAATACAGCAACTGGGTCGACCCC	ARDSGEYSNWVDP	250	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	135	27	19	2	6	70.4
FR3-IMGT	136	249	114	105	9	0	92.1
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	233	18	6	90.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  V  S  S  G  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_11189  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCGTCAGCAGTGGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGG  90
V  90.7% (233/257)  IGHV4-61*01  49   ...................C...........G.............................G...........................A  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  H  I  Y  N  Y  N  R  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D 
                    Query_11189  91   CTGGAGTGGATCGGTCATATCTATAACTATAACAGAGGGAGCACCAATTATAATCCCTCCCTCCAAAGTCGAGTCACCATATCAGTAGAC  180
V  90.7% (233/257)  IGHV4-61*01  139  ...........T..GT........T..------..T...........C..C..C.........A.G........................  222
                                       L  E  W  I  G  Y  I  Y  Y        S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------CDR3-I
                                       T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  G  E  Y 
                    Query_11189  181  ACATCCAAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATTCCGGTGAATAC  270
V  90.7% (233/257)  IGHV4-61*01  223  ..G........................C...G...........................G.................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  90.0% (9/10)     IGHD4-17*01  7    --------------------------------------------------------------------------------......C...  16

                                      MGT-------------->                                  
                                       S  N  W  V  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11189  271  AGCAACTGGGTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  98.0% (49/50)    IGHJ5*02     2    --.......T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_86693

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*03                                                                                           350     8e-99
IGHD6-13*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGCACTG	GCAGCAG	ACG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAGGCACTGGCAGCAGACGACTTTGACTTC	AREALAADDFDF	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11190  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTACCACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-74*03  47   ............................................AG.T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  G  D  G  S  G  T  T  Y  A  D  S  V  K  G  R  F  T  A  A  R  D  N  A  
                    Query_11190  91   TGTGGGTCTCACGTATTAATGGTGATGGGAGTGGCACAACTTACGCGGACTCCGTGAAGGGCCGATTCACCGCCGCCAGAGACAACGCCA  180
V  94.8% (237/250)  IGHV3-74*03  137  ....................A...........A.......G..............................AT.T...............  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      R  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  A  L  A  A  D  D  
                    Query_11190  181  GGAACACGCTATATCTGCAAATGAGCAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGAGAGGCACTGGCAGCAGACGACT  270
V  94.8% (237/250)  IGHV3-74*03  227  A.........G.............A...........................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-13*01  8    -----------------------------------------------------------------------------.......------  14
J  97.7% (42/43)    IGHJ4*02     4    ---------------------------------------------------------------------------------------...  6

                                      ------->                                
                                      F  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11190  271  TTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  310
J  97.7% (42/43)    IGHJ4*02     7    ......A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_86692

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           389     2e-110
IGHD3-3*01                                                                                            10.3    132   
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCG	TGGAG	AGCCAATA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTGGAGAGCCAATATTTGAGTCC	ARDRGEPIFES	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	270	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  S  S  V  K  V  S  C  K  T  S  G  G  P  F  S  T  Y
                    Query_11191  1    GCAGCTGGTGCAGTCTGGAGCTGAGCTGAAGAAGCCTGGGTCCTCTGTGAAGGTCTCCTGCAAGACTTCTGGAGGCCCCTTCAGCACCTA  90
V  92.8% (270/291)  IGHV1-69*01  6    ..................G......G...................G..................G...........A.........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        T  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  A  A  K  Y  A  H
                    Query_11191  91   TACTATCAGCTGGGTTCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCGGCATCATCCCTATCTTTGGTGCCGCGAAGTACGCACA  180
V  92.8% (270/291)  IGHV1-69*01  96   .G.............G...................................A..G..................A.A..A..C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  F  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  T  S  E  D  T  A
                    Query_11191  181  TAAGTTCCAGGGCAGAGTCACTTTTACCGCGGACGAATCTACGAGCACAGCCTACATGGAGCTGAGCAGCCTGACATCTGAGGACACGGC  270
V  92.8% (270/291)  IGHV1-69*01  186  G....................GA................C..................................G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        V  Y  Y  C  A  R  D  R  G  E  P  I  F  E  S  W  G  Q  G  T  L  L  S  V  S  S  
                    Query_11191  271  CGTCTATTACTGCGCGAGAGATCGTGGAGAGCCAATATTTGAGTCCTGGGGCCAGGGAACCCTGCTCAGCGTCTCCTCAG  350
V  92.8% (270/291)  IGHV1-69*01  276  ...G........T........-----------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD3-3*01   14   ------------------------.....---------------------------------------------------  18
J  90.7% (39/43)    IGHJ4*02     6    -------------------------------------.....C.A...................G...C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_10393

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           400     9e-114
IGHD5-18*01                                                                                           18.0    0.64  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGCCCC	GGATACGGCCATGGT	CTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGCCCCGGATACGGCCATGGTCTTC	ARVAPDTAMVF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  A  S  G  V  T  F  N  S  Y
                    Query_11192  1    GCAGCTGGTGCAGTCTGGAGCCGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGGCTTCTGGAGTCACCTTCAACAGCTA  90
V  94.1% (273/290)  IGHV1-69*06  6    ..................G..T........................................A...........G........G......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  L  P  F  F  G  T  A  T  Y  A  Q
                    Query_11192  91   TGCCATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCCTCCCTTTCTTTGGTACAGCAACATACGCACA  180
V  94.1% (273/290)  IGHV1-69*06  96   ...T....G.................................................A.....A...............AC........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  G  T  A  Y  M  E  L  S  S  P  R  S  D  D  T  A
                    Query_11192  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGGGCACAGCGTACATGGAACTGAGCAGCCCGAGATCTGACGACACGGC  270
V  94.1% (273/290)  IGHV1-69*06  186  ...........................................A.......C........G..........T.........G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        V  F  Y  C  A  R  V  A  P  D  T  A  M  V  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11192  271  CGTGTTTTACTGTGCGAGAGTTGCCCCGGATACGGCCATGGTCTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  94.1% (273/290)  IGHV1-69*06  276  .....A..............------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                              
D  86.7% (13/15)    IGHD5-18*01  3    ---------------------------......A..T.....--------------------------------------  17
J  100.0% (35/35)   IGHJ4*02     14   ---------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_10392

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           322     2e-90
IGHD3-10*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGAGTAAATCC	ATGGTTCGGGGTGTTA	CCCCCGCGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGAGTAAATCCATGGTTCGGGGTGTTACCCCCGCGGGCTAC	AGSKSMVRGVTPAGY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	242	3	3	0	0	100
Total	N/A	N/A	242	224	18	0	92.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  S  V  T  S  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11193  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGGTTCAGCGTCACTAGCAACTACATGAATTGGGTCCGGCAGGCTCCAGGGAAGGGGCTGG  90
V  92.6% (224/242)  IGHV3-53*01  47   ....................G...............C.....G..............GC........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  H  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  S  I  F  R  D  S  T  K  
                    Query_11193  91   AGTGGGTCTCAGTTATTCATAGCGGGGGTACCACATACTACGCAGACTCCGTGAAGGGCCGATTCAGCATCTTTAGAGACAGTACTAAGA  180
V  92.6% (224/242)  IGHV3-53*01  137  .................T.......T....G...................................C.....CC.......A.T.C....  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------CDR3-IMGT----
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  G  S  K  S  M  V  R  G  V  
                    Query_11193  181  ACACCCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTACTACTGTGCGGGGAGTAAATCCATGGTTCGGGGTGTTA  270
V  92.6% (224/242)  IGHV3-53*01  227  ....G............................................G..T.........----------------------------  288
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  93.8% (15/16)    IGHD3-10*01  9    --------------------------------------------------------------------------...........A....  24

                                      ------------->                                  
                                      T  P  A  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11193  271  CCCCCGCGGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (38/38)   IGHJ4*02     11   ----------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_10391

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           332     4e-93
IGHD4-4*01                                                                                            14.1    9.7  
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD4-4*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	TAAGGGGGGGGGTGGAGATGCGC	CTACAGT	CA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAAGGGGGGGGGTGGAGATGCGCCTACAGTCAACTTCTACTACGGGATGGGCCTC	AKGGGGDAPTVNFYYGMGL	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	91	23	0	79.8
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	284	248	36	0	87.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  T  F  T  S  Y 
                    Query_11194  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACCTCTGGTTACACCTTTACCAGTTAC  91
V  87.3% (248/284)  IGHV1-18*04  7    ............................A..................................G.T....................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  L  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  D  G  G  N  G  G  T  K  Y  S  E 
                    Query_11194  92   GGTCTCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCGACGGTGGCAATGGTGGCACAAAATATTCAGAG  181
V  87.3% (248/284)  IGHV1-18*04  97   ...A...G.................................................AG..C.TA.......AA......C...G..C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  L  T  R  D  T  S  A  R  T  V  Y  M  E  L  T  S  L  K  S  D  D  S  A 
                    Query_11194  182  AAATTTCAGGGCAGAGTCACCCTGACCAGGGACACATCCGCGCGCACAGTGTACATGGAACTGACCAGCCTAAAATCTGATGATTCGGCT  271
V  87.3% (248/284)  IGHV1-18*04  187  ..GC.C...............A......CA.........A..A......CC........G....GG.....G.G......C..CA....C  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  A  K  G  G  G  G  D  A  P  T  V  N  F  Y  Y  G  M  G  L  W  G  P  G  T  K  V 
                    Query_11194  272  GTATATTACTGTGCTAAGGGGGGGGGTGGAGATGCGCCTACAGTCAACTTCTACTACGGGATGGGCCTCTGGGGCCCAGGGACCAAGGTC  361
V  87.3% (248/284)  IGHV1-18*04  277  ..G...........----------------------------------------------------------------------------  290
                                       V  Y  Y  C  A                                                                            
D  100.0% (7/7)     IGHD4-4*01   4    -------------------------------------.......----------------------------------------------  10
J  87.5% (49/56)    IGHJ6*02     7    ----------------------------------------------...A.........T....A.G.........A........C....  50

                                                  
                                       T  V  S  S 
                    Query_11194  362  ACCGTCTCGTCA  373
J  87.5% (49/56)    IGHJ6*02     51   ........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_10390

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     8e-121
IGHD2-2*01                                                                                            21.8    0.046 
IGHJ5*01                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAGTAGTGAA	TACCAGCTGCT	GTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACTCC	ARSSSEYQLLFWFDS	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	282	11	0	96.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_11195  2    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCA  91
V  96.2% (282/293)  IGHV5-51*03  2    ....G................................................................G............C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  
                    Query_11195  92   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATATATCCTGGTGACTCTGATGCCAGATATA  181
V  96.2% (282/293)  IGHV5-51*03  92   .............................................................C..................A.......C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  K  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_11195  182  GTCCGTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTCAAGGCCTCGGACA  271
V  96.2% (282/293)  IGHV5-51*03  182  .C.........C.....................C..........................................G.............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  Y  C  A  R  S  S  S  E  Y  Q  L  L  F  W  F  D  S  W  G  Q  G  T  L  V  T  V  
                    Query_11195  272  CCGCCATGTATTATTGTGCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCA  361
V  96.2% (282/293)  IGHV5-51*03  272  .............C.........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (11/11)   IGHD2-2*01   16   -----------------------------------...........--------------------------------------------  26
J  95.7% (45/47)    IGHJ5*01     5    -------------------------------------------------.....................A..................T  45

                                            
                                      T  S  
                    Query_11195  362  CCTCAG  367
J  95.7% (45/47)    IGHJ5*01     46   ......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_86699

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           282     4e-78
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	217	27	6	86.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_11196  4    CCCTGAGACTCTCCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.8% (217/250)  IGHV4-34*01  50   .....TCC...A..........C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_11196  94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.8% (217/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_11196  184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.8% (217/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_11196  274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_86698

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGGGAA	AACGAC	TGGGATCGTAGGTGGTCCGGT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGGGAAAACGACTGGGATCGTAGGTGGTCCGGTTTTCACTTC	ASRENDWDRRWSGFHF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	224	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11197  1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.6% (224/242)  IGHV4-59*08  49   ....................T......................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       L  I  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S  R  N 
                    Query_11197  91   TTGATTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGTCGACTCACCATCTCAGTAGACACGTCGAGGAAC  180
V  92.6% (224/242)  IGHV4-59*08  139  .G......G...A........A........A.....................A.......G.......A..............C.A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  S  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  N  D  W  D  R  R  W 
                    Query_11197  181  CAGTTCTCCCTGAGCGTGAACTCGGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCGAGCCGGGAAAACGACTGGGATCGTAGGTGG  270
V  92.6% (224/242)  IGHV4-59*08  229  .............AGC...G...T.....C................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD1-1*01   12   ---------------------------------------------------------------------......---------------  17

                                      -------------->                                  
                                       S  G  F  H  F  W  G  P  G  T  L  V  T  V  S  S  
                    Query_11197  271  TCCGGTTTTCACTTCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  319
J  93.0% (40/43)    IGHJ4*02     6    ------...G...A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_10395

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            364     5e-103
IGHD3-9*01                                                                                            29.5    2e-04 
IGHJ5*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGCGCTGAA	GATTTTTTGACTGGTTAT	AATG	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCGCTGAAGATTTTTTGACTGGTTATAATGCC	ARGGAEDFLTGYNA	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11198  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGCTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-7*01   47   .....................................................A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  I  Y  Y  V  D  S  V  K  G  R  F  A  M  S  R  D  N  A  
                    Query_11198  91   AGTGGGTGGCCAACATCAAGCAAGATGGAAGTGAGATATACTATGTGGACTCTGTGAAGGGCCGATTCGCCATGTCCAGAGACAACGCCA  180
V  96.8% (241/249)  IGHV3-7*01   137  ................A...................A...............................A....C................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  A  E  D  F  L  
                    Query_11198  181  AGAACTCTCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGGAGGCGCTGAAGATTTTTTGA  270
V  96.8% (241/249)  IGHV3-7*01   227  .......A............................................G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD3-9*01   8    --------------------------------------------------------------------------------...A......  17

                                      ------------->                                  
                                      T  G  Y  N  A  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11198  271  CTGGTTATAATGCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  94.4% (17/18)    IGHD3-9*01   18   ........----------------------------------------  25
J  100.0% (36/36)   IGHJ5*02     16   ------------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_228278

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           315     5e-88
IGHD6-13*01                                                                                           18.0    0.62 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTGGT	CAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTGGTCAGCAGCTGACTGACTAC	ARDSGQQLTDY	276	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	275	147	111	3	33	75.5
CDR3-IMGT (germline)	276	283	8	8	0	0	100
Total	N/A	N/A	283	244	6	33	86.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_11199  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  86.2% (244/283)  IGHV3-21*01  47   ..............................................C..................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  H  I  Y  Y  G  D  S  V  K  G  R  F  T  Y  Y  A  D  S  V  
                    Query_11199  91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAGTCACATATATTATGGAGACTCAGTGAAGGGCCGATTCACCTATTACGCAGACTCAGTGA  180
V  86.2% (244/283)  IGHV3-21*01  137  ................................T.....---------------------------------..C................  193
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I                                   Y  Y  A  D  S  V  

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                      K  G  R  F  T  I  S  R  D  D  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  
                    Query_11199  181  AGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATT  270
V  86.2% (244/283)  IGHV3-21*01  194  ..........................A..........................................................G....  283
                                      K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-----------CDR3-IMGT----------->                                  
                                      Y  C  A  R  D  S  G  Q  Q  L  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11199  271  ACTGTGCGAGAGATTCTGGTCAGCAGCTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
V  86.2% (244/283)  IGHV3-21*01  284  .............-----------------------------------------------------------  296
                                      Y  C  A  R                                                              
D  100.0% (9/9)     IGHD6-13*01  9    --------------------.........-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_87565

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           240     2e-65
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTCTTG	ATTACTAT	CCTTCG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTCTTGATTACTATCCTTCGAACTGGTTCGACCGC	ARDSLDYYPSNWFDR	239	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	44	7	0	86.3
CDR2-IMGT	92	124	33	17	7	9	51.5
FR3-IMGT	125	238	114	103	11	0	90.4
CDR3-IMGT (germline)	239	246	8	7	1	0	87.5
Total	N/A	N/A	233	195	29	9	83.7


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-----------
                                       S  G  F  T  F  S  I  Y  G  M  N  W  V  R  Q  A  P  G  E  G  L  E  W  V  S  S  M  S  G  D 
                    Query_11200  14   TCTGGATTCACCTTCAGCATCTATGGCATGAACTGGGTCCGCCAGGCTCCTGGGGAGGGACTAGAGTGGGTCTCATCCATGAGTGGTGAT  103
V  83.7% (195/233)  IGHV3-23*01  73   ..............T....G.....C.....G..................A...A....G..G............G.T..T......AG.  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      CDR2-IMGT-----------><----------------------------------------------------FR3-IMGT--------
                                       D  D  D  E  D  N  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  N  N  I  L  Y  L 
                    Query_11200  104  GATGATGATGAAGATAATACATACTACACAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAATAATATCCTCTATCTA  193
V  83.7% (195/233)  IGHV3-23*01  163  .G..G.---------.GC.........G...................G..........................G..C.CG..G.....G  243
                                       G  G           S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------CDR3-IMGT----------------->
                                       Q  M  N  R  L  R  A  D  D  T  A  V  Y  F  C  A  R  D  S  L  D  Y  Y  P  S  N  W  F  D  R 
                    Query_11200  194  CAAATGAACCGCCTGAGAGCCGACGACACGGCCGTATATTTCTGTGCGAGAGATTCTCTTGATTACTATCCTTCGAACTGGTTCGACCGC  283
V  83.7% (195/233)  IGHV3-23*01  244  .........A.............G................A........A...-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (8/8)     IGHD3-10*01  3    -------------------------------------------------------------........---------------------  10
J  98.0% (48/49)    IGHJ5*02     3    ---------------------------------------------------------------------------.............C.  17

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11200  284  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  317
J  98.0% (48/49)    IGHJ5*02     18   ..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_87566

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11201  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_11201  91   CTCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..G...............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G 
                    Query_11201  181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .........................G................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11201  271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_333450

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           321     6e-90
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_11202  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_11202  91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_11202  181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.8% (225/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_11202  271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_333457

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           339     2e-95
IGHD3-10*01                                                                                           12.2    36   
IGHJ4*03                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ4*03	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAACA	TGTCATGTA	TCGGGG	GGGTCGCTTGGA	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATGTCATGTATCGGGGGGGTCGCTTGGACTACTTTGACTCC	AKHVMYRGGRLDYFDS	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	254	37	0	87.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  P  L  R  I  S  C  K  G  S  G  N  T  F  T  T  S
                    Query_11203  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGCCTCTGAGGATTTCCTGTAAGGGGTCTGGAAACACTTTCACCACCTC  90
V  87.3% (254/291)  IGHV5-51*01  6    ..............................A........G...T......A...C...........T......T...GC..T....G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  L  P  E  K  G  L  E  W  M  G  I  V  F  P  D  D  S  D  T  I  Y  N  P
                    Query_11203  91   GTGGATCGCCTGGGTGCGCCAGCTGCCCGAGAAAGGCCTGGAGTGGATGGGCATCGTCTTTCCTGATGATTCAGACACCATATACAATCC  180
V  87.3% (254/291)  IGHV5-51*01  96   C.......G.............A......G.....................G...A...A.....G...C..T..T....G.....GC..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  L  I  T  I  S  A  D  K  S  L  K  T  A  Y  L  Q  W  S  S  L  K  A  R  D  P  A
                    Query_11203  181  GTCCTTCCAAGGCCTGATCACCATCTCGGCCGACAAGTCCCTCAAGACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCCGGGACCCCGC  270
V  87.3% (254/291)  IGHV5-51*01  186  ..............A.G..........A............A...GC.................................TC....A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        I  Y  Y  C  A  K  H  V  M  Y  R  G  G  R  L  D  Y  F  D  S  W  G  Q  G  T  L  V  I  A  S
                    Query_11203  271  CATATATTACTGTGCGAAACATGTCATGTATCGGGGGGGTCGCTTGGACTACTTTGACTCCTGGGGCCAAGGGACCCTGGTCATCGCCTC  360
V  87.3% (254/291)  IGHV5-51*01  276  ...G.............G...---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-10*01  14   ------------------------------......------------------------------------------------------  19
J  91.5% (43/47)    IGHJ4*03     2    ------------------------------------------------...........A.......................C..T...  43

                                           
                                        S  
                    Query_11203  361  TTCAG  365
J  91.5% (43/47)    IGHJ4*03     44   C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_87561

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           213     2e-57
IGHD1-1*01                                                                                            12.2    34   
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTAGAGGGGGCTTCGGGACACAGT	TACAAC	GGACGGCGGGGGATTC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTAGAGGGGGCTTCGGGACACAGTTACAACGGACGGCGGGGGATTCTGGACGTC	ARVEGASGHSYNGRRGILDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	21	9	0	70
FR2-IMGT	58	108	51	43	8	0	84.3
CDR2-IMGT	109	129	21	11	10	0	52.4
FR3-IMGT	130	243	114	85	29	0	74.6
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	192	56	0	77.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  Y  S  Y  N  D  Y  W  A  W  V  R  Q  S  P  G  K  G 
                    Query_11204  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCTACAGTTATAATGATTATTGGGCCTGGGTCCGTCAGTCCCCGGGGAAGGGC  90
V  77.4% (192/248)  IGHV4-39*01  49   ...............................G.......AG....AG..G.T.C..C....G....A....C...C....A........G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  Y  H  S  R  G  S  S  S  Y  N  P  S  F  G  G  R  V  S  I  S  L  G  P  S 
                    Query_11204  91   CTGGAGTGGATTGGGACCTATCACTCTCGTGGCAGTTCCTCCTACAACCCATCTTTCGGGGGTCGAGTCTCTATTTCTCTAGGCCCGTCC  180
V  77.4% (192/248)  IGHV4-39*01  139  ................GTATCT.T.A.A....G..CA...A.........G..CC..AA.A........A.C..A..CG...A.A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       S  N  Q  I  S  L  Q  L  S  S  V  T  A  T  D  T  S  V  Y  F  C  A  R  V  E  G  A  S  G  H 
                    Query_11204  181  AGCAATCAAATCTCCCTGCAACTAAGTTCAGTGACCGCCACAGACACTTCTGTTTATTTCTGTGCGAGGGTAGAGGGGGCTTCGGGACAC  270
V  77.4% (192/248)  IGHV4-39*01  229  .AG..C..GT........A.G..G..C..T.........G.......GG....G....A.........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      DR3-IMGT------------------------>                                 
                                       S  Y  N  G  R  R  G  I  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11204  271  AGTTACAACGGACGGCGGGGGATTCTGGACGTCTGGGGCCAGGGGACCACTGTCACCGTCTCCTCA  336
D  100.0% (6/6)     IGHD1-1*01   3    ---......---------------------------------------------------------  8
J  95.1% (39/41)    IGHJ6*02     22   -------------------------................A........G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_87562

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            350     8e-99
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGGGGTACC	TATTACTATGAAAGTAGTGGT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGGGGTACCTATTACTATGAAAGTAGTGGTTACTTTGACTAC	ARRGTYYYESSGYFDY	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	235	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  K  K  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11205  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAAAAAGTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.5% (235/246)  IGHV4-4*02   49   ..............................................GT..C.......................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  T  T  V  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_11205  91   GAGTGGATTGGAGAAATCTATCATAGTGGGACCACCGTCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGATAAGTCCAAG  180
V  95.5% (235/246)  IGHV4-4*02   139  ...........G...................G....AA..........................................C.........  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  Q  F  S  L  K  L  S  S  V  T  T  A  D  T  A  V  Y  Y  C  A  R  R  G  T  Y  Y  Y  E  S 
                    Query_11205  181  AACCAGTTTTCCCTGAAGCTGAGCTCTGTGACCACCGCGGACACGGCCGTGTACTACTGTGCGAGAAGGGGTACCTATTACTATGAAAGT  270
V  95.5% (235/246)  IGHV4-4*02   229  ........C........................G...................T............------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  95.2% (20/21)    IGHD3-22*01  2    ---------------------------------------------------------------------------...........T...  16

                                      ----------------->                                  
                                       S  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11205  271  AGTGGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  95.2% (20/21)    IGHD3-22*01  17   ......----------------------------------------------  22
J  100.0% (46/46)   IGHJ4*02     3    ------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_333454

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD3-3*01                                                                                            23.8    0.010
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	GGAGTGGTTATT	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGGAGTGGTTATTGGCCTACTTTGACTAC	AKEEWLLAYFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  F  S  H  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11206  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTTTTCTCATAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-23*01  47   ...................................ACC.T.AGC..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  S  N  S  P  E  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11206  91   AGTGGGTCGCAGGTATCAGTAATAGTCCTGAAAGCACATACTACGCTGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  90.8% (227/250)  IGHV3-23*01  137  ........T...C...T...GG....GG..GT..............A...........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      R  N  T  L  Y  L  Q  M  N  G  V  R  A  E  D  T  A  V  Y  Y  C  A  K  E  E  W  L  L  A  Y  
                    Query_11206  181  GGAACACCCTGTATCTGCAAATGAACGGCGTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAAGAGGAGTGGTTATTGGCCTACT  270
V  90.8% (227/250)  IGHV3-23*01  227  A......G..................A..C......................A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD3-3*01   15   ----------------------------------------------------------------------............--------  26
J  91.5% (43/47)    IGHJ4*02     2    -------------------------------------------------------------------------------------.....  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_11206  271  TTGACTACTGGGGCCAGGGGACCCTGGTCAGTGTTTCCTCAG  312
J  91.5% (43/47)    IGHJ4*02     7    ...................A..........CC..C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_228270

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           283     1e-78
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	ACGAA	ACGTTTGG	AAGGGGGGCGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAACGAAACGTTTGGAAGGGGGGCGCGTTTGATATC	ARQRNVWKGGAFDI	250	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	63	36	25	5	6	69.4
FR2-IMGT	64	114	51	47	4	0	92.2
CDR2-IMGT	115	135	21	15	6	0	71.4
FR3-IMGT	136	249	114	99	15	0	86.8
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	221	30	6	86


Alignments

                                      <--------FR1-IMGT---------><-------------CDR1-IMGT------------><--------------------FR2-IM
                                       T  L  S  L  T  C  T  V  S  G  A  S  M  S  I  D  S  S  S  Y  C  W  A  W  I  R  Q  P  P  G 
                    Query_11207  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGCCTCCATGAGTATCGATAGTAGTAGTTACTGCTGGGCCTGGATCCGCCAGCCCCCAGGG  90
V  86.0% (221/257)  IGHV4-39*01  49   .............................T.G......C..C.------............A.....G......................  132
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S        S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  G  L  E  W  V  G  N  I  N  H  T  G  V  T  Y  S  N  P  S  L  S  S  R  V  S  T  Y  I  D 
                    Query_11207  91   AAGGGGCTGGAGTGGGTTGGCAATATCAATCACACTGGGGTCACCTACTCCAATCCGTCCCTCAGCAGTCGAGTCAGCACATACATAGAT  180
V  86.0% (221/257)  IGHV4-39*01  133  ...............A....G.G....T..T.T.G....AG........A...C..........AG..........C..T..C.G....C  222
                                       K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><----------------CDR3
                                       M  S  M  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  R  N  V  W 
                    Query_11207  181  ATGTCCATGAACCAGTTTTCCCTGAGGCTGACCTCCGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACAACGAAACGTTTGG  270
V  86.0% (221/257)  IGHV4-39*01  223  .C.....A.........C.......A.....G...T.........................................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  100.0% (8/8)     IGHD3-16*01  12   ----------------------------------------------------------------------------------........  19

                                      -IMGT--------------->                                  
                                       K  G  G  A  F  D  I  W  S  Q  G  T  L  V  T  V  S  S  
                    Query_11207  271  AAGGGGGGCGCGTTTGATATCTGGAGCCAAGGGACATTGGTCACCGTCTCTTCAG  325
J  95.3% (41/43)    IGHJ3*02     8    ------------............G...........A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_228271

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           367     6e-104
IGHD3-10*01                                                                                           14.1    9.4   
IGHJ2*01                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGCC	ACTATGG	GGATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATC	ARSHYGDAYWYLDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	261	26	0	90.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T  S  Y 
                    Query_11208  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATCTTCACCAGTTAT  91
V  90.9% (261/287)  IGHV1-18*01  7    .................................................................T..........C...T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  F  E  W  M  G  W  I  S  P  Y  N  G  N  T  A  Y  A  E 
                    Query_11208  92   GGAATCACTTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAGCCTACGCAGAG  181
V  90.9% (261/287)  IGHV1-18*01  97   ..T....GC...........................C.......................G.................AA...T...C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  F  T  V  A  T  E  T  S  T  N  T  A  F  M  E  L  R  S  L  K  A  D  D  T  A 
                    Query_11208  182  AAGTTCCAGGGCAGATTCACCGTGGCCACAGAGACTTCCACGAACACAGCCTTCATGGAGCTGCGGAGTCTGAAAGCTGACGACACGGCC  271
V  90.9% (261/287)  IGHV1-18*01  187  ...C...........G.....A..A.......C..A.......G........A..........A....C....G.T..............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  S  H  Y  G  D  A  Y  W  Y  L  D  I  W  G  R  G  S  L  V  T  V  S  S  
                    Query_11208  272  GTCTATTACTGTGCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATCTGGGGCCGTGGCTCCCTGGTCACTGTCTCCTCAG  359
V  90.9% (261/287)  IGHV1-18*01  277  ..G..............-----------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                          
D  100.0% (7/7)     IGHD3-10*01  6    ----------------------.......-----------------------------------------------------------  12
J  94.3% (50/53)    IGHJ2*01     1    -----------------------------------..........T.....C..............A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_333459

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           310     1e-86
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGACTAG	TGGAACGAC	TCTTGTGT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGACTAGTGGAACGACTCTTGTGTACTGGTTCGACCCC	ARTSGTTLVYWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	219	21	0	91.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  N  T  Y  Y  W  S  *  I  R  Q  P  P  G  K  Q  L  E 
                    Query_11209  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAATACCTACTACTGGAGCTGAATCCGGCAGCCCCCAGGGAAACAACTGGAG  90
V  91.2% (219/240)  IGHV4-59*08  49   ..................A.....................G..GT..............G....................GGG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  T  T  Y  S  P  S  L  K  S  R  V  T  M  S  I  D  T  S  K  N 
                    Query_11209  91   TGGATTGGTTATATCTCTTACAGTGGGAGCACCACTTATAGCCCCTCCCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCCAAGAAC  180
V  91.2% (219/240)  IGHV4-59*08  139  ........G.......A.................AC..C.A...........................A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  T  S  G  T  T  L  V  Y  W 
                    Query_11209  181  CAGTTCTCCCTGAGGCTGACGTCTGTGACCGCCGCAGACACGGCCATTTATTACTGTGCGCGGACTAGTGGAACGACTCTTGTGTACTGG  270
V  91.2% (219/240)  IGHV4-59*08  229  .............A.....GC........................G.G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD1-1*01   9    --------------------------------------------------------------------.........-------------  17
J  95.8% (46/48)    IGHJ5*02     4    -------------------------------------------------------------------------------------.....  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  I  L  V  A  V  S  S  
                    Query_11209  271  TTCGACCCCTGGGGCCAGGGAATCCTGGTCGCCGTCTCCTCAG  313
J  95.8% (46/48)    IGHJ5*02     9    ......................C.......A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_333458

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            372     2e-105
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AGGAGACTTCTAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAAGGAGACTTCTATTACTACTACTACCCTTTGGACGTC	AREGDFYYYYYPLDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11210  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  97.6% (244/250)  IGHV3-9*01   47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  D  T  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11210  91   AGTGGGTCTCAGGTATTAGTTGGAACAGTGATACCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (244/250)  IGHV3-9*01   137  .........................T....G..G........................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  R  E  G  D  F  Y  Y  Y  
                    Query_11210  181  AGAACTCCCTGTATCTGCAAATGAATAGTCTGAGACCTGAGGACACGGCCTTGTATTACTGTGCAAGAGAAGGAGACTTCTATTACTACT  270
V  97.6% (244/250)  IGHV3-9*01   227  .........................C.........G..............................A...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
J  94.7% (54/57)    IGHJ6*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---------------->                                 
                                      Y  Y  P  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11210  271  ACTACCCTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  94.7% (54/57)    IGHJ6*02     13   .....GG.A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_228274

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           274     8e-76
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACTGTGACTTC	ARVSTSAYYCDF	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	209	34	0	86


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  Q  P  P  G  K  G  L  E  
                    Query_11211  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGACAACCCCCAGGAAAGGGACTGGAGT  93
V  86.0% (209/243)  IGHV4-59*01  50   .....TCC...A....................T........A.....T.C.........A....G..G........G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  S  F  D  T  S  K  R  
                    Query_11211  94   GGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGTCCTTTGACACGTCCAAGAGGC  183
V  86.0% (209/243)  IGHV4-59*01  140  ......GGT....C...........G.G..C...C................A..G............A..AG.A.............AC.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  Y  Y  C  D  
                    Query_11211  184  AGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATACTACTGTGACT  273
V  86.0% (209/243)  IGHV4-59*01  230  ............A....AGC..........................G............A...---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD2-2*01   17   --------------------------------------------------------------------......----------------  22
J  87.0% (40/46)    IGHJ4*02     1    ------------------------------------------------------------------------------......T.....  12

                                      ->                                
                                      F  W  G  R  G  T  R  V  V  V  S  S
                    Query_11211  274  TCTGGGGCCGGGGAACCCGGGTCGTCGTCTCCTC  307
J  87.0% (40/46)    IGHJ4*02     13   A........A........T....AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_228275

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD6-25*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAGG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTC	ARQSSAGRTRYGMDV	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	279	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  
                    Query_11212  2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATTCGACTTTACCG  91
V  94.6% (279/295)  IGHV5-51*01  2    ........................................C.............................T.......A.AG.......A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  V  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_11212  92   ACTACTGGATCGTCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACGAGATACA  181
V  94.6% (279/295)  IGHV5-51*01  92   G...........G..............T......................................................C.......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  G  L  K  A  S  D  
                    Query_11212  182  GTCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACA  271
V  94.6% (279/295)  IGHV5-51*01  182  .C...............................C.............A.......................A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  F  C  A  R  Q  S  S  A  G  R  T  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_11212  272  CCGCCATGTATTTTTGTGCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCT  361
V  94.6% (279/295)  IGHV5-51*01  272  ............AC...........-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD6-25*01  7    --------------------------.......---------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -----------------------------------------------...........................................  57

                                           
                                      S  S 
                    Query_11212  362  CGTCA  366
J  97.9% (47/48)    IGHJ6*02     58   .C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_228276

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           366     2e-103
IGHD3-10*01                                                                                           10.3    123   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGACGGTTTAGCGATGGCCGTCCGA	CGGGG	N/A	CTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGACGGTTTAGCGATGGCCGTCCGACGGGGCTTTAATTAC	AKDDGLAMAVRRGFNY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11213  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-30*18  47   ...................................................G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  H  D  G  I  N  K  Y  Y  P  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11213  91   AGTGGGTGGCAGTTATATCACACGATGGAATTAATAAATACTATCCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.8% (242/250)  IGHV3-30*18  137  ....................T.T.......G.............G.............................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  S  V  Y  Y  C  A  K  D  D  G  L  A  M  A  
                    Query_11213  181  AGAACACCCTGTATCTGCAAATGGACAGCCTGAGAGCTGAGGACACGTCTGTGTATTACTGTGCGAAAGATGACGGTTTAGCGATGGCCG  270
V  96.8% (242/250)  IGHV3-30*18  227  .......G...............A.......................G......................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      T------------------>                                  
                                      V  R  R  G  F  N  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11213  271  TCCGACGGGGCTTTAATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (5/5)     IGHD3-10*01  15   -----.....--------------------------------------------  19
J  95.5% (42/44)    IGHJ4*02     5    ----------....G.C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_63118

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           274     8e-76
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GTTCTCC	ATTGTAGTAGTTCCAG	TCCCGGATGAAA	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGTTCTCCATTGTAGTAGTTCCAGTCCCGGATGAAAACTCCTACGCAATGGACGTC	AKEFSIVVVPVPDENSYAMDV	239	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	11	1	0	91.7
CDR1-IMGT	26	49	24	20	4	0	83.3
FR2-IMGT	50	100	51	44	7	0	86.3
CDR2-IMGT	101	124	24	19	5	0	79.2
FR3-IMGT	125	238	114	102	12	0	89.5
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	233	204	29	0	87.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  S  T  F  T  T  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  S  V 
                    Query_11214  14   TGTGCAGCGTCTGGATCCACCTTTACCACCCATGCCATGAGTTGGGTCCGCCAGGCTCCAGGAAAGGGGCTTGAGTGGGTCGCAAGCGTT  103
V  87.6% (204/233)  IGHV3-23*01  64   ........C.......T........G..G.T..........C....................G........G.........T..GCTA..  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       T  G  T  G  G  S  T  Y  Y  A  D  S  V  K  R  R  F  T  I  S  R  D  N  P  N  N  I  L  F  L 
                    Query_11214  104  ACTGGTACTGGAGGCAGCACATACTACGCAGACTCCGTGAAGCGCCGGTTCACCATCTCCAGAGACAACCCCAACAACATCCTCTTTCTA  193
V  87.6% (204/233)  IGHV3-23*01  154  .G.....G...T..T...........................G.........................TT....G....CG..G.A...G  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------------------CDR3-IMGT---------
                                       H  M  N  S  P  R  A  E  D  T  A  V  Y  Y  C  A  K  E  F  S  I  V  V  V  P  V  P  D  E  N 
                    Query_11214  194  CACATGAACAGCCCGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAAGAGTTCTCCATTGTAGTAGTTCCAGTCCCGGATGAAAAC  283
V  87.6% (204/233)  IGHV3-23*01  244  ..A..........T.....................A.................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  93.8% (15/16)    IGHD2-2*01   6    ------------------------------------------------------------...........A....--------------  21
J  90.6% (48/53)    IGHJ6*02     10   ----------------------------------------------------------------------------------------..  11

                                      ----------------->                                 
                                       S  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  A  S 
                    Query_11214  284  TCCTACGCAATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCGCCTCA  334
J  90.6% (48/53)    IGHJ6*02     12   .A.....GT.................A..................T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_313716

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           346     2e-97
IGHD5-12*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CATCC	GTGGATATGGTG	CTCCTGGGACGCAAGTTGT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACATCCGTGGATATGGTGCTCCTGGGACGCAAGTTGTCTACGGAATGGACGTC	ARDIRGYGAPGTQVVYGMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  A  G  Y  Y  W  S  W  I  R  Q  R  P  G  K  G 
                    Query_11215  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCACTAGTGCTGGTTACTACTGGAGCTGGATCCGCCAGCGCCCAGGGAAGGGC  90
V  94.0% (236/251)  IGHV4-31*03  49   .............................T..........GC....G.............................A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  Q  S  R  I  T  I  S  Q  D  K  S 
                    Query_11215  91   CTGGAGTGGATTGGATACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCCAGAGTCGAATTACCATATCACAAGACAAGTCT  180
V  94.0% (236/251)  IGHV4-31*03  139  ..............G..........................................A........G...........GT.....C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  I  R  G  Y  G  A 
                    Query_11215  181  AAGAACCAGTTCTCCCTGAACCTGAGCTCTGTGACGGCCGCGGACACGGCCGTATATTACTGTGCGAGGGACATCCGTGGATATGGTGCT  270
V  94.0% (236/251)  IGHV4-31*03  229  ....................G..............T.................G..............A..-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD5-12*01  1    ----------------------------------------------------------------------------........A...--  12

                                      DR3-IMGT------------------------>                                 
                                       P  G  T  Q  V  V  Y  G  M  D  V  W  G  H  G  T  R  V  T  V  S  S 
                    Query_11215  271  CCTGGGACGCAAGTTGTCTACGGAATGGACGTCTGGGGCCACGGGACCAGGGTCACCGTCTCCTCA  336
J  93.9% (46/49)    IGHJ6*02     14   -----------------......T.................A.......C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_91531

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	ATTTCTTAGGG	GCTCGTC	AGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACATTTCTTAGGGGCTCGTCAGGCTTTCACTAC	TFLRGSSGFHY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	101	13	0	88.6
CDR3-IMGT (germline)	249	250	2	2	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  D  L  D  W  V  R  Q  A  S  G  K  G  L  
                    Query_11216  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGATTTGGACTGGGTCCGCCAGGCTTCCGGGAAAGGCCTGG  90
V  90.8% (227/250)  IGHV3-73*01  47   .........A.........................................C.A..C............................G....  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  M  R  T  K  D  D  N  Y  A  T  L  Y  A  A  S  V  R  G  R  F  T  I  S  R  D  
                    Query_11216  91   AGTGGGTTGGCCGTATGAGAACCAAAGATGACAATTACGCGACACTATATGCTGCGTCGGTGAGAGGCAGGTTCACCATCTCCAGAGATG  180
V  90.8% (227/250)  IGHV3-73*01  137  ................T....G.....C.A...G..........GC.................A..........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  N  M  A  Y  L  Q  M  S  G  L  D  T  E  D  T  A  L  Y  F  C  T  F  L  R  G  S  S  
                    Query_11216  181  ATTCAAAGAACATGGCTTATCTGCAAATGAGCGGCCTGGACACCGAGGACACGGCCCTTTACTTCTGTACATTTCTTAGGGGCTCGTCAG  270
V  90.8% (227/250)  IGHV3-73*01  227  ............C...G.............A.A.....A.A...............G.G..T.A......--------------------  296
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------.......--  17

                                      ---------->                                  
                                      G  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11216  271  GCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (43/44)    IGHJ4*02     5    -....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_313714

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*02                                                                                            335     4e-94
IGHD1-26*01                                                                                           12.2    36   
IGHJ5*02                                                                                              58.4    1e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*02	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGAGC	CGCAAATGGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGACGGGAGCCGCAAATGGGCTGGTTCGACCCT	TRREPQMGWFDP	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	68	3	0	95.8
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	46	5	0	90.2
CDR2-IMGT	153	176	24	16	8	0	66.7
FR3-IMGT	177	290	114	95	19	0	83.3
CDR3-IMGT (germline)	291	296	6	5	1	0	83.3
Total	N/A	N/A	290	252	38	0	86.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  D  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  
                    Query_11217  7    TGCAGCTGGTGCAGTCTGGAGCTGACGTGAAGAAGCCTGGGGCCTCAGTGAAGGTGTCCTGCAAGGCTTCTGGATACACCTTCACCGGCT  96
V  86.9% (252/290)  IGHV1-2*02   5    ...................G.....G.............................C..................................  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  T  L  H  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  N  I  Y  H  G  D  T  Y  Y  N  
                    Query_11217  97   ACACTCTACACTGGGTGCGGCAGGCCCCTGGACAAGGGCTTGAGTGGCTAGGATGGATCAATATTTATCATGGTGACACATATTATAATC  186
V  86.9% (252/290)  IGHV1-2*02   95   ..TA.A.G...........A...........................A.G...........CCC.A.CAG.....G....A.C...GCA.  184
                                      Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  E  G  R  V  T  L  T  R  D  T  S  I  D  T  A  Y  M  E  L  S  G  L  K  S  D  D  T  
                    Query_11217  187  AGAAATTTGAAGGCCGGGTGACCCTGACCAGGGACACGTCCATCGATACAGCCTACATGGAACTGAGCGGGCTGAAATCGGACGACACGG  276
V  86.9% (252/290)  IGHV1-2*02   185  ....G...C.G...A....C...A....................AGC..............G......A......G...T..........  274
                                      Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  

                                      -------------><-------------CDR3-IMGT------------>                             
                                      A  V  Y  Y  C  T  R  R  E  P  Q  M  G  W  F  D  P  W  G  Q  G  I  L  I  T  V  S
                    Query_11217  277  CCGTATATTACTGTACGAGACGGGAGCCGCAAATGGGCTGGTTCGACCCTTGGGGCCAGGGAATCCTCATCACCGTCTC  355
V  86.9% (252/290)  IGHV1-2*02   275  ....G.........G.....-----------------------------------------------------------  294
                                      A  V  Y  Y  C  A  R                                                            
D  100.0% (6/6)     IGHD1-26*01  9    ---------------------......----------------------------------------------------  14
J  90.5% (38/42)    IGHJ5*02     5    -------------------------------------............C.............C...GG..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_91533

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TCTCC	TATTGCTATGA	GCGGGACTCGGTTTTCGAGTCGGGCTCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATCTCCTATTGCTATGAGCGGGACTCGGTTTTCGAGTCGGGCTCCCCTTGACTAC	AKSPIAMSGTRFSSRAPLDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11218  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAACTATGCCCTGAGTTGGGTCCGACAGGCTCCAGGGAAGGGGCTGC  90
V  93.1% (231/248)  IGHV3-23*01  47   .............................................G.......A....C........C.....................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  T  I  S  G  S  G  R  G  T  S  T  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11218  91   AGTGGGTCTCAACTATTAGTGGTAGTGGTCGTGGTACCTCCACCGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (231/248)  IGHV3-23*01  137  ...........G.................G..A.C..A.A.TA...............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  Q  L  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  S  P  I  A  M  S  G  
                    Query_11218  181  AGAACACGCTGTATCTGCAACTGAACAGCCTGAGAGCCGACGACACGGCCGTATACTATTGTGCGAAATCTCCTATTGCTATGAGCGGGA  270
V  93.1% (231/248)  IGHV3-23*01  227  ....................A...................G..............T..C.........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.9% (10/11)    IGHD3-22*01  2    -------------------------------------------------------------------------....A......------  12

                                      R3-IMGT------------------------>                                  
                                      T  R  F  S  S  R  A  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11218  271  CTCGGTTTTCGAGTCGGGCTCCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
J  100.0% (42/42)   IGHJ4*02     7    ------------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_91534

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_11219  1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_11219  91   GAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ...................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_11219  181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11219  271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_91535

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         300     9e-84
IGHD2-15*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GGAGAGGGCTGCCGCGCTT	TTGTAGTGCTGGT	TCCTGCGAACTCTC	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGGGAGAGGGCTGCCGCGCTTTTGTAGTGCTGGTTCCTGCGAACTCTCCGGTATGGACGTC	ATGRGLPRFCSAGSCELSGMDV	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  V  V  S  G  G  S  I  T  S  G  A  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_11220    1    ACCCTGTCCCTCACCTGCGTTGTCTCTGGTGGCTCCATTACCAGTGGGGCTTCCTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  88.4% (221/250)  IGHV4-30-4*01  49   ..................AC..................C.G......T.A..A.....................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  N  I  H  H  S  G  N  T  Y  Y  N  P  S  L  N  S  R  I  T  I  S  I  D  R  S 
                    Query_11220    91   CTGGAGTGGATTGGGAACATCCATCACAGCGGGAACACCTACTACAACCCGTCCCTCAACAGTCGGATTACCATATCCATAGATAGGTCC  180
V  88.4% (221/250)  IGHV4-30-4*01  139  ...............T.....T..T....T....G........................G.....AG..........AG....C.C....  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------------
                                         K  N  Q  V  S  L  N  L  N  S  A  T  V  A  D  T  A  V  Y  Y  C  A  T  G  R  G  L  P  R  F 
                    Query_11220    181  AAAAACCAGGTCTCCCTGAACCTGAACTCTGCAACAGTCGCGGACACGGCCGTGTATTACTGTGCCACAGGGAGAGGGCTGCCGCGCTTT  270
V  88.4% (221/250)  IGHV4-30-4*01  229  ..G......T..........G....G.....TG..T.C...A.........................G..--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD2-15*01    7    -----------------------------------------------------------------------------------------.  7

                                        --CDR3-IMGT--------------------------->                                 
                                         C  S  A  G  S  C  E  L  S  G  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_11220    271  TGTAGTGCTGGTTCCTGCGAACTCTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  342
D  92.3% (12/13)    IGHD2-15*01    8    .......G....------------------------------------------------------------  19
J  97.8% (45/46)    IGHJ6*02       17   --------------------------..................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_91536

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           318     5e-89
IGHD3-3*01                                                                                            12.2    31   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAGTGG	CAAGTAGGG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGAGTGGCAAGTAGGGGGTTCGACCCC	VRGVASRGFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  F  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11221  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGCAGCTACTTTATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGACTCG  90
V  90.8% (226/249)  IGHV3-74*01  47   ...............................A...........T.......GG................................G..G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  A  R  I  R  S  D  G  T  T  T  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  V  
                    Query_11221  91   TGTGGGTCGCACGTATTCGGAGTGATGGGACTACCACAGCCTACGCGGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAACGTCA  180
V  90.8% (226/249)  IGHV3-74*01  137  ........T........AAT..........G..G....AG........................A......................C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  S  T  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  V  R  G  V  A  S  R  G  F  
                    Query_11221  181  AGAGCACACTGTATCTGGAAATGAACAGTCTGAGAGTCGAGGACACGGCTGTGTATTATTGTGTGAGAGGAGTGGCAAGTAGGGGGTTCG  270
V  90.8% (226/249)  IGHV3-74*01  227  ...A...G.........C..................C.....................C....CA....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-3*01   16   ---------------------------------------------------------------------......---------------  21
J  97.8% (44/45)    IGHJ5*02     7    ------------------------------------------------------------------------------------......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_11221  271  ACCCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  309
J  97.8% (44/45)    IGHJ5*02     13   ..........................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_91537

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           364     6e-103
IGHD3-3*01                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAGTCGTACCGGCTTTCCGGCAAAGTCCCAATCG	CGATTTTTGGAGTGG	CTGACCGACGCCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCAGTCGTACCGGCTTTCCGGCAAAGTCCCAATCGCGATTTTTGGAGTGGCTGACCGACGCCAAGTACGGGATGGCCGTC	ARDLSRTGFPAKSQSRFLEWLTDAKYGMAV	240	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  S  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11222  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTCCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (240/247)  IGHV3-53*01  47   .................................T........................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  T  G  D  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  P  R  D  N  T  K  
                    Query_11222  91   AGTGGGTCTCAGTTATTTATACCGGTGACAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCCCCAGAGACAATACCAAGA  180
V  97.2% (240/247)  IGHV3-53*01  137  .....................G.....GT..........................................T...........T......  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><------------------------------
                                      N  M  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  S  R  T  G  F  P  
                    Query_11222  181  ACATGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGATCTCAGTCGTACCGGCTTTCCGG  270
V  97.2% (240/247)  IGHV3-53*01  227  ...C...............................................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          

                                      ----------CDR3-IMGT--------------------------------------->                               
                                      A  K  S  Q  S  R  F  L  E  W  L  T  D  A  K  Y  G  M  A  V  W  G  Q  G  T  T  V  T  V  S  
                    Query_11222  271  CAAAGTCCCAATCGCGATTTTTGGAGTGGCTGACCGACGCCAAGTACGGGATGGCCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCT  360
D  100.0% (15/15)   IGHD3-3*01   7    --------------...............-------------------------------------------------------------  21
J  95.8% (46/48)    IGHJ6*02     15   --------------------------------------------.....T....A...................................  60

                                        
                                      S 
                    Query_11222  361  CA  362
J  95.8% (46/48)    IGHJ6*02     61   ..  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_91538

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11223  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11223  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_11223  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11223  271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_91539

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           357     1e-100
IGHD4-4*01                                                                                            16.1    2.2   
IGHJ3*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-4*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGGAAGACA	GACTACAG	C	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGGAAGACAGACTACAGCGATGCTTTTGATATG	AWKTDYSDAFDM	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	237	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11224  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.3% (237/246)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  Y  T  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  M  S 
                    Query_11224  91   CTGGAGTGGATTGGCTACATCTCTTACACTGGGAGAACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACATGTCT  180
V  96.3% (237/246)  IGHV4-31*03  139  ..............G.......A.....G......C.................................................C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  W  K  T  D  Y  S  D  A 
                    Query_11224  181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACGGCCGCAGACACGGCCGTCTATTACTGTGCGTGGAAGACAGACTACAGCGATGCT  270
V  96.3% (237/246)  IGHV4-31*03  229  ...................A...............T.....G...........G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (8/8)     IGHD4-4*01   2    ---------------------------------------------------------------------------........-------  9
J  98.0% (48/49)    IGHJ3*02     2    ------------------------------------------------------------------------------------......  7

                                      -------->                                  
                                       F  D  M  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11224  271  TTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  313
J  98.0% (48/49)    IGHJ3*02     8    ........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_313718

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           335     4e-94
IGHD1-1*01                                                                                            14.1    8.4  
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-1*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TG	GGTACAA	AGTTCGCTCAGAA	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATGGGTACAAAGTTCGCTCAGAAGCTTTTGACATC	VRDGYKVRSEAFDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  S  S  W  M  H  W  V  R  Q  S  P  G  K  G  L  
                    Query_11225  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTAGTTCCTGGATGCACTGGGTCCGCCAATCTCCAGGGAAGGGGCTGA  90
V  92.8% (232/250)  IGHV3-74*01  47   ...................................A..........C.A......................G.................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      I  W  V  S  R  I  N  G  D  G  S  G  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11225  91   TTTGGGTCTCACGTATTAATGGTGATGGCAGTGGCACAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.8% (232/250)  IGHV3-74*01  137  .G..................A.......G...A......G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  V  R  D  G  Y  K  V  R  S  
                    Query_11225  181  AGAATACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCCATATACTATTGTGTGAGAGATGGGTACAAAGTTCGCTCAG  270
V  92.8% (232/250)  IGHV3-74*01  227  ....C............................................TG.G..T..C....CA.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-1*01   1    ------------------------------------------------------------------------.......-----------  7

                                      ------------->                                
                                      E  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S
                    Query_11225  271  AAGCTTTTGACATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  316
J  97.7% (43/44)    IGHJ3*02     5    --........T...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_313719

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           382     4e-108
IGHD5-12*01                                                                                           12.2    36    
IGHJ2*01                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGA	ATATAG	AGCCTG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGAATATAGAGCCTGACTGGTACTTCGATCTC	AREGNIEPDWYFDL	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	16	8	0	66.7
FR3-IMGT	175	288	114	105	9	0	92.1
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	270	26	0	91.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  Y  A  S  G  Y  A  L  T 
                    Query_11226  1    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCTATGCTTCTGGTTATGCGTTGACC  90
V  91.2% (270/296)  IGHV1-18*04  1    .......................................................A..........A.G...........CA.C..T...  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  N  G  M  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  T  P  K  R  A  N  T  K  Y 
                    Query_11226  91   AGCAACGGTATGAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCACCCCTAAAAGGGCCAACACAAAGTAC  180
V  91.2% (270/296)  IGHV1-18*04  91   ...T.......C....................................................G.G..T.C.AT.GT........C..T  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       T  Q  K  F  Q  G  R  V  T  M  T  A  D  T  S  T  N  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_11226  181  ACACAGAAGTTCCAGGGCAGAGTCACCATGACCGCAGACACATCCACGAACACAGCCTACATGGAGCTGAGGAGTCTGAGATCTGACGAC  270
V  91.2% (270/296)  IGHV1-18*04  181  G........C.......................A...............G........................C...............  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  I  Y  Y  C  A  R  E  G  N  I  E  P  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S 
                    Query_11226  271  ACGGCCATATATTACTGTGCGAGAGAGGGGAATATAGAGCCTGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCC  360
V  91.2% (270/296)  IGHV1-18*04  271  ......G.G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD5-12*01  5    -------------------------------......-----------------------------------------------------  10
J  100.0% (49/49)   IGHJ2*01     3    -------------------------------------------...............................................  49

                                        
                                       S
                    Query_11226  361  TC  362
J  100.0% (49/49)   IGHJ2*01     50   ..  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_302493

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            363     1e-102
IGHD4-17*01                                                                                           14.1    8.2   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAAGG	CGGTTACTAC	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAAGGCGGTTACTACCCCTTTGACTAC	ARDKGGYYPFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  T  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11227  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGGTACCTTTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-7*03   47   .........................................A...G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11227  91   AGTGGGTGGCCAACATAAACCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (241/250)  IGHV3-7*03   137  ...................G......................................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  V  Y  L  Q  M  N  G  L  R  G  E  D  T  A  L  Y  Y  C  A  R  D  K  G  G  Y  Y  P  
                    Query_11227  181  AAAACTCAGTGTATCTGCAAATGAACGGCCTGAGAGGCGAGGACACGGCCCTGTATTACTGTGCGAGAGATAAAGGCGGTTACTACCCCT  270
V  96.4% (241/250)  IGHV3-7*03   227  .G......C.................A.........C.............G...................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD4-17*01  7    ----------------------------------------------------------------------------....G.....----  16
J  97.4% (38/39)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                             
                                      F  D  Y  W  G  Q  G  T  P  V  T  V  S
                    Query_11227  271  TTGACTACTGGGGCCAGGGAACCCCGGTCACCGTCTC  307
J  97.4% (38/39)    IGHJ4*02     7    ........................T............  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_307128

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*06                                                                                           315     5e-88
IGHD3-3*01                                                                                            19.9    0.15 
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*06	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGGAACA	ATTTTTGGAG	CCACGGGGA	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGGAACAATTTTTGGAGCCACGGGGATATGGACGTC	AKDRNNFWSHGDMDV	230	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	20	4	0	83.3
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	107	7	0	93.9
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	213	12	0	94.7


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  H  C  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_11228  13   GTCTGGATTCACCTTCAGTCACTGTGGTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTACGA  102
V  94.7% (213/225)  IGHV3-33*06  72   ...................AG..A...C...........................................................T..  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  Q  N  T  V  Y  L  L  M  N
                    Query_11228  103  TGGAAGTAATAAATACTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCCAGAACACCGTGTATCTGCTAATGAA  192
V  94.7% (213/225)  IGHV3-33*06  162  ....................C...........................................A.......GC.........A......  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------CDR3-IMGT----------------->        
                                        S  L  R  V  E  D  T  A  V  Y  H  C  A  K  D  R  N  N  F  W  S  H  G  D  M  D  V  W  G  Q
                    Query_11228  193  CAGCCTGAGAGTCGAGGACACGGCTGTGTATCACTGTGCGAAAGATCGGAACAATTTTTGGAGCCACGGGGATATGGACGTCTGGGGCCA  282
V  94.7% (213/225)  IGHV3-33*06  252  ...........C...................T.............---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                
D  100.0% (10/10)   IGHD3-3*01   9    -----------------------------------------------------..........---------------------------  18
J  97.7% (42/43)    IGHJ6*02     20   ------------------------------------------------------------------------..................  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_11228  283  AGGGACCACGGTCACCGTCTCGTCA  307
J  97.7% (42/43)    IGHJ6*02     38   .....................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_318872

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           363     2e-102
IGHD3-22*01                                                                                           21.8    0.043 
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCAATTTCCCGT	TAGTGGTTATT	CCG	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCAATTTCCCGTTAGTGGTTATTCCGATTACTACTACAAGTACGCTATGGACGTC	AKDQFPVSGYSDYYYKYAMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11229  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATACACTGGGTCCGCCAGGCGCCAGGCAAGGGGCTGG  90
V  96.4% (241/250)  IGHV3-30*18  47   .......................................................G.................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  S  Y  D  G  S  N  K  D  Y  G  D  P  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_11229  91   AGTGGGTGGCAGGTATATCATATGATGGAAGTAATAAAGACTATGGAGACCCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  96.4% (241/250)  IGHV3-30*18  137  ............T.........................T......C....T..................................TT...  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  Q  F  P  V  S  G  
                    Query_11229  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTTTATTACTGTGCGAAAGATCAATTTCCCGTTAGTGGTT  270
V  96.4% (241/250)  IGHV3-30*18  227  ....................................................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD3-22*01  16   ----------------------------------------------------------------------------------........  23

                                      DR3-IMGT-------------------------->                                 
                                      Y  S  D  Y  Y  Y  K  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11229  271  ATTCCGATTACTACTACAAGTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  338
D  100.0% (11/11)   IGHD3-22*01  24   ...-----------------------------------------------------------------  26
J  95.2% (59/62)    IGHJ6*02     1    ------...........T.C....G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_286424

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            16.1    2.3  
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGGGAGGCGG	TTACGATT	CTATCCTCGGT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGGAGGCGGTTACGATTCTATCCTCGGTCTACGACTACGCTATGGACGTC	ASGEAVTILSSVYDYAMDV	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	232	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  F  Y  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_11230  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  95.9% (232/242)  IGHV4-59*01  49   ...........................................G..A................................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  Y  Y  S  G  R  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_11230  91   TGGATTGGGTCTATTTATTACAGTGGGAGGACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCGTATCAGTTGACACGTCCAAGAAC  180
V  95.9% (232/242)  IGHV4-59*01  139  ..........A...C..............C....................................A.......A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  G  E  A  V  T  I  L  S  S 
                    Query_11230  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGCGGGGAGGCGGTTACGATTCTATCCTCG  270
V  95.9% (232/242)  IGHV4-59*01  229  ...................G.................................C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (8/8)     IGHD3-3*01   4    -------------------------------------------------------------------------........---------  11

                                      ----------------------->                                 
                                       V  Y  D  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11230  271  GTCTACGACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  327
J  96.4% (53/55)    IGHJ6*02     8    --....T......G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_286421

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ3*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTTCAGAGGCACTT	CTATGACACTGGTGGTTAT	GGGGTC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTTCAGAGGCACTTCTATGACACTGGTGGTTATGGGGTCGATGCTTTTGATGCC	AKDLQRHFYDTGGYGVDAFDA	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11231  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.8% (227/250)  IGHV3-23*01  47   ..........................................G..............G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  L  D  G  S  G  H  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11231  91   AGTGGGTCTCAGCACTTGATGGCAGTGGTCATAAGACATACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAATTCCA  180
V  90.8% (227/250)  IGHV3-23*01  137  .............TA..AG...T......GG..GC.............................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  V  Y  L  Q  L  D  S  L  G  V  E  D  T  A  L  Y  Y  C  A  K  D  L  Q  R  H  F  Y  
                    Query_11231  181  AGAACACAGTGTACCTGCAATTAGATAGCCTGGGAGTCGAGGACACGGCCTTATATTACTGTGCGAAAGATCTTCAGAGGCACTTCTATG  270
V  90.8% (227/250)  IGHV3-23*01  227  .......GC....T......A.GA.C......A...C.............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  84.2% (16/19)    IGHD3-22*01  7    -------------------------------------------------------------------------------------.....  11

                                      DR3-IMGT-------------------------->                                  
                                      D  T  G  G  Y  G  V  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11231  271  ACACTGGTGGTTATGGGGTCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTGACAGTCTCTTCAG  339
D  84.2% (16/19)    IGHD3-22*01  12   .T.G.A........-------------------------------------------------------  25
J  93.9% (46/49)    IGHJ3*01     2    --------------------.............T.....................C..C..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_318877

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           352     3e-99
IGHD3-3*01                                                                                            10.3    119  
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GCTTG	ACGAT	CGCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGCTTGACGATCGCATACTACTTTGACTAC	ATGLTIAYYFDY	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_11232  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  95.2% (237/249)  IGHV4-31*02  50   .....TCC...A..................G...........................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  D  T  S  
                    Query_11232  94   TAGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTTACCATATCACTAGACACGTCTA  183
V  95.2% (237/249)  IGHV4-31*02  140  .G.......................................................A...................G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  D  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  L  T  I  A  Y  Y  
                    Query_11232  184  AGGACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGCTTGACGATCGCATACTACT  273
V  95.2% (237/249)  IGHV4-31*02  230  ..A...............A.................................G.............G..---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-3*01   6    --------------------------------------------------------------------------.....-----------  10
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11232  274  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_318874

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           341     6e-96
IGHD5-12*01                                                                                           16.1    2.4  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTGGTCCCGAAAA	ATATAGTG	AATATC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTGGTCCCGAAAAATATAGTGAATATCCTTTTGACATT	ARFGPEKYSEYPFDI	273	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	20	4	0	83.3
FR2-IMGT	75	125	51	50	1	0	98
CDR2-IMGT	126	158	33	20	1	12	60.6
FR3-IMGT	159	272	114	106	8	0	93
CDR3-IMGT (germline)	273	278	6	6	0	0	100
Total	N/A	N/A	278	250	16	12	89.9


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  V  S  I  I  T  Y  Y  W  S  W  I  R  
                    Query_11233  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACTTGCACTGTCTCTGGTGTCTCCATCATCACTTACTACTGGAGCTGGATCCGGC  90
V  89.9% (250/278)  IGHV4-59*01  26   ................T....................C................G........GT.G.......................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----------CDR2-IMGT-----------><---------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  F  N  T  N  Y  N  P  S  L  K  
                    Query_11233  91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGCTATATTTATTACAGTGGGAGCACCAACTTCAACACCAACTACAACCCCTCCCTCAAGA  180
V  89.9% (250/278)  IGHV4-59*01  116  ...............................G.....C..............------------..........................  193
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S              T  N  Y  N  P  S  L  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  V  A  I  S  L  D  T  S  K  S  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  
                    Query_11233  181  GTCGAGTCGCCATTTCACTAGACACGTCCAAGAGCCAGTTCTCCCTGAGACTGAGTTCGGTGACCGCTGCGGACACGGCCGTGTATTACT  270
V  89.9% (250/278)  IGHV4-59*01  194  ........A....A...G...............A..............AG.....C..T...............................  283
                                      S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  

                                      -><-----------------CDR3-IMGT----------------->                                  
                                      C  A  R  F  G  P  E  K  Y  S  E  Y  P  F  D  I  W  G  Q  G  T  M  V  T  V  S  A  
                    Query_11233  271  GTGCGAGATTTGGTCCCGAAAAATATAGTGAATATCCTTTTGACATTTGGGGCCAAGGGACAATGGTCACCGTCTCTGCAG  351
V  89.9% (250/278)  IGHV4-59*01  284  ........-------------------------------------------------------------------------  291
                                      C  A  R                                                                          
D  100.0% (8/8)     IGHD5-12*01  5    ----------------------........---------------------------------------------------  12
J  93.3% (42/45)    IGHJ3*02     6    ------------------------------------.......T..C..............................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_286422

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           400     9e-114
IGHD4-17*01                                                                                           18.0    0.67  
IGHJ6*01                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAG	CTACGGTGA	GTCCGAGTACTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTC	ARDLATVSPSTFYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  T  S  Y 
                    Query_11234  2    CAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCTTCTGGTTACACCTTTACCAGTTAC  91
V  94.1% (273/290)  IGHV1-18*04  7    ....................T..........................................G......................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_11234  92   GGTATCACTTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  181
V  94.1% (273/290)  IGHV1-18*04  97   .......GC........A..............A................................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  S  D  D  T  A 
                    Query_11234  182  ATGGTCCGAGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.1% (273/290)  IGHV1-18*04  187  .A.C...AG.G.................C....................C..........C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  T  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_11234  272  GTGTATTACTGTGCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTCTGGGGTCAAGGGACCACGGTCACC  361
V  94.1% (273/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------.........--------------------------------------------------------  12
J  98.1% (52/53)    IGHJ6*01     11   -----------------------------------------------........................G..................  53

                                                
                                       V  S  S  
                    Query_11234  362  GTCTCCTCAG  371
J  98.1% (52/53)    IGHJ6*01     54   ..........  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_318878

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           339     2e-95
IGHD1-20*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGAATACAA	GTATAAC	GGAATAT	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGAATACAAGTATAACGGAATATGTATGGACGTC	TRSEYKYNGICMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11235  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTAAGTAATAATTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (231/245)  IGHV3-53*01  47   ........................................C....GC..C.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_11235  91   AGTGGGTCTCAGTTATTTATAGTGGTGGTACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.3% (231/245)  IGHV3-53*01  137  ......................C.......G..............................A............................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      T  T  L  Y  L  Q  M  N  S  L  R  A  E  D  S  A  V  Y  Y  C  T  R  S  E  Y  K  Y  N  G  I  
                    Query_11235  181  CCACACTGTATCTTCAAATGAACAGTTTGAGAGCCGAGGACTCGGCCGTGTATTACTGTACGAGATCAGAATACAAGTATAACGGAATAT  270
V  94.3% (231/245)  IGHV3-53*01  227  A...G....................CC..............A.................G.....-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD1-20*01  2    ----------------------------------------------------------------------------.......-------  8

                                      ---------->                                 
                                      C  M  D  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_11235  271  GTATGGACGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCCTCA  314
J  97.7% (43/44)    IGHJ6*02     19   ..........................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_286429

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           438     5e-125
IGHD3-3*01                                                                                            41.1    8e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	TACGCCT	CGATTTTTGGAGTGGTTATTGTAC	GAGAATCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTAC	VRYASIFGVVIVRESFDY	293	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	79	73	70	3	0	95.9
CDR1-IMGT	80	103	24	24	0	0	100
FR2-IMGT	104	154	51	51	0	0	100
CDR2-IMGT	155	178	24	22	2	0	91.7
FR3-IMGT	179	292	114	114	0	0	100
CDR3-IMGT (germline)	293	298	6	5	1	0	83.3
Total	N/A	N/A	292	286	6	0	97.9


Alignments

                                      <-------------------------------FR1-IMGT--------------------------------><-------CDR1-IMGT
                                        V  R  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S
                    Query_11236  7    GGTGCGTCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAG  96
V  97.9% (286/292)  IGHV5-51*01  3    .....AG.....G.............................................................................  92
                                        V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S

                                      ------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-------
                                        Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S
                    Query_11236  97   CTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACTAGATACAG  186
V  97.9% (286/292)  IGHV5-51*01  93   ...............................................................T.................C........  182
                                        Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S

                                      ---------------------------------------------FR3-IMGT-------------------------------------
                                        P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T
                    Query_11236  187  CCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACAC  276
V  97.9% (286/292)  IGHV5-51*01  183  ..........................................................................................  272
                                        P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T

                                      ---------------><----------------------CDR3-IMGT--------------------->                    
                                        A  M  Y  Y  C  V  R  Y  A  S  I  F  G  V  V  I  V  R  E  S  F  D  Y  W  G  Q  G  T  L  V
                    Query_11236  277  CGCCATGTATTACTGTGTGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTACTGGGGCCAGGGAACCCTGGT  366
V  97.9% (286/292)  IGHV5-51*01  273  .................C....--------------------------------------------------------------------  294
                                        A  M  Y  Y  C  A  R                                                                     
D  95.8% (23/24)    IGHD3-3*01   7    -----------------------------....................A...-------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    -------------------------------------------------------------.............................  34

                                                    
                                        T  V  S  S  
                    Query_11236  367  CACCGTCTCCTCAG  380
J  100.0% (43/43)   IGHJ4*02     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_286428

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         346     2e-97
IGHD2-2*02                                                                                            41.1    7e-08
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	G	GGATATTGTAGTGGTACCAGGTGCTTTACC	GGGGTAG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGGATATTGTAGTGGTACCAGGTGCTTTACCGGGGTAGGGTTCGACCCC	AREGYCSGTRCFTGVGFDP	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	30	25	2	3	83.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	251	238	10	3	94.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  S  V  S  G  D  S  I  S  S  G     Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_11237    1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGCAGTGGG---TACTCCTGGAGCTGGATCCGGCAGCCACCGGGGAAGGGC  87
V  94.8% (238/251)  IGHV4-30-2*01  49   ..................G............G...............TGGT.............................A.........  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  R  S 
                    Query_11237    88   CTGGAGTGGATTGGGTACATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCATTAGACAGGTCC  177
V  94.8% (238/251)  IGHV4-30-2*01  139  ..........................................................................A...G...........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                         T  N  Q  V  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  Y  C  S  G  T 
                    Query_11237    178  ACGAACCAGGTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTACTGTGCCAGAGAGGGATATTGTAGTGGTACC  267
V  94.8% (238/251)  IGHV4-30-2*01  229  .A.......T................C.............................T..............-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (27/30)    IGHD2-2*02     2    ------------------------------------------------------------------------............A.....  19

                                        3-IMGT----------------------->                                  
                                         R  C  F  T  G  V  G  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11237    268  AGGTGCTTTACCGGGGTAGGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  90.0% (27/30)    IGHD2-2*02     20   ..C....A....----------------------------------------------------  31
J  100.0% (45/45)   IGHJ5*02       7    -------------------.............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_339680

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           299     3e-83
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGGG	AGCAATGGCTGG	GGAAGGTACTATAATTT	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTTCGGTATGGACGCC	ARGHRGSNGWGRYYNFGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	22	2	6	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	223	22	6	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  S  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_11238  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGCCCTTCAGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.8% (223/251)  IGHV4-34*01  49   .......................C..T......T.........------....C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  L  D  T  S 
                    Query_11238  91   CTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAATCCGTCCCTCCAGAGTCGAGTCACCATATCACTAGACACGTCC  180
V  88.8% (223/251)  IGHV4-34*01  133  .....G.............T..A....AG.....G............C.........A....................G...........  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  G  S  N  G 
                    Query_11238  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGGGAGCAATGGC  270
V  88.8% (223/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  R  Y  Y  N  F  G  M  D  A  W  G  Q  G  T  A  V  S  I  S  S 
                    Query_11238  271  TGGGGAAGGTACTATAATTTCGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCATCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.3% (42/46)    IGHJ6*02     17   --------------------...........T................A.....A..G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_214218

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TACGGGACAC	TGTAGTAGTGCCATCTGCGATG	GACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATACGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTAC	ARHTGHCSSAICDGPDY	292	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	69	5	0	93.2
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	110	4	0	96.5
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	295	282	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  Q  K  P  G  E  A  L  K  I  S  C  K  G  S  G  Y  S  F  G  
                    Query_11239  5    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGCAAAAGCCGGGGGAGGCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCA  94
V  95.6% (282/295)  IGHV5-51*01  2    ....G.....G.....................A.......C......T......................................AC..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_11239  95   GTTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  184
V  95.6% (282/295)  IGHV5-51*01  92   .C..........G.............................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  G  L  Q  A  S  D  
                    Query_11239  185  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCGGCCTGCAGGCCTCGGACA  274
V  95.6% (282/295)  IGHV5-51*01  182  .................................C.........C...........................A.....A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  M  Y  Y  C  A  R  H  T  G  H  C  S  S  A  I  C  D  G  P  D  Y  W  G  Q  G  T  L  V  
                    Query_11239  275  CCGCCATGTATTACTGTGCGAGACATACGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTACTGGGGCCAGGGAACCCTGGTCA  364
V  95.6% (282/295)  IGHV5-51*01  272  .........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  86.4% (19/22)    IGHD2-2*01   8    -----------------------------------.........A...G....T...---------------------------------  29
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------.............................  36

                                                  
                                      T  V  S  S  
                    Query_11239  365  CCGTCTCCTCAG  376
J  100.0% (41/41)   IGHJ4*02     37   ............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_339685

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           305     4e-85
IGHD4-17*01                                                                                           16.1    2.5  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	TTTGGAGGGCCTCGCCTCGGG	TACGGTGA	TAAGTCTTGAACGATCACAGG	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATTTGGAGGGCCTCGCCTCGGGTACGGTGATAAGTCTTGAACGATCACAGGACTCCTACTACTACGCCATGGCCGTC	ANLEGLASGTVISLERSQDSYYYAMAV	243	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	221	26	0	89.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  A  Y  A  M  H  W  V  R  Q  A  P  D  K  G  L  
                    Query_11240  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTTAGTGCCTATGCCATGCACTGGGTCCGCCAGGCTCCAGACAAGGGACTGG  90
V  89.5% (221/247)  IGHV3-30*18  47   ....................G...................C...AG.....G..........................G......G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  M  S  Y  D  G  Y  V  K  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  E  A  
                    Query_11240  91   AGTGGGTGGCAGTTATGTCCTATGATGGATATGTTAAGTCCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGAAGCCA  180
V  89.5% (221/247)  IGHV3-30*18  137  ................A..A.........AG.AA...A.A...........................................A.TT...  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      N  N  T  V  F  L  Q  M  N  S  L  R  Q  E  D  T  A  I  Y  Y  C  A  N  L  E  G  L  A  S  G  
                    Query_11240  181  ACAACACGGTGTTTCTGCAAATGAACAGCCTGAGACAGGAGGACACGGCTATATATTACTGTGCGAATTTGGAGGGCCTCGCCTCGGGTA  270
V  89.5% (221/247)  IGHV3-30*18  227  .G......C...A......................GCT............G.G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD4-17*01  5    ----------------------------------------------------------------------------------------..  6

                                      --------CDR3-IMGT----------------------------------->                              
                                      T  V  I  S  L  E  R  S  Q  D  S  Y  Y  Y  A  M  A  V  W  G  Q  G  T  P  V  T  V  S 
                    Query_11240  271  CGGTGATAAGTCTTGAACGATCACAGGACTCCTACTACTACGCCATGGCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCC  353
D  100.0% (8/8)     IGHD4-17*01  7    ......-----------------------------------------------------------------------------  12
J  91.1% (51/56)    IGHJ6*02     4    ---------------------------...A...........GT....A...................A..............  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_339686

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            302     3e-84
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCCACGGGCTC	AGCAGTGGC	GATGACTCTGTTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCCACGGGCTCAGCAGTGGCGATGACTCTGTTTATGACTAC	VVHGLSSGDDSVYDY	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	102	12	0	89.5
CDR3-IMGT (germline)	241	241	1	1	0	0	100
Total	N/A	N/A	241	217	24	0	90


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  R  V  S  G  G  S  I  S  D  S  H  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_11241  1    ACCCTGTCCCTCACCTGCCGTGTCTCTGGTGGCTCCATCAGCGACAGTCACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.0% (217/241)  IGHV4-4*02   49   ..................GC......................AGT...A.........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  F  H  S  G  S  A  K  Y  N  P  S  L  Q  S  R  L  T  M  S  L  D  K  S  R 
                    Query_11241  91   GAGTGGATTGGGGAAGTTTTTCACAGTGGGAGCGCCAAGTACAACCCGTCCCTTCAGAGTCGACTCACCATGTCACTAGACAAGTCTAGG  180
V  90.0% (217/241)  IGHV4-4*02   139  ...............A.C.A...T.........A....C..............CA........G.......A...G..........C.A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  K  L  Q  S  V  T  A  A  Y  T  A  V  Y  Y  C  V  V  H  G  L  S  S  G  D  D 
                    Query_11241  181  AACCAGTTCTCCCTGAAGCTGCAGTCTGTGACCGCCGCGTACACGGCCGTGTATTACTGTGTGGTCCACGGGCTCAGCAGTGGCGATGAC  270
V  90.0% (217/241)  IGHV4-4*02   229  .....................AGC...............G.....................-----------------------------  289
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  100.0% (9/9)     IGHD6-19*01  7    ---------------------------------------------------------------------------.........------  15

                                      -------------->                                  
                                       S  V  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11241  271  TCTGTTTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (41/41)   IGHJ4*02     8    --------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_339688

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            330     1e-92
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	N/A	TGGGGG	GGGGGGGATGGCAACCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGGGGGGGGGGATGGCAACCCGACTAC	VGGGGWQPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	227	16	0	93.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  L  I  F  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11242  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGACTCATCTTTAGTGACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.4% (227/243)  IGHV3-7*01   47   ....................G...........T...C.......AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  E  Q  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11242  91   AGTGGGTGGCCAACATAGAGCAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.4% (227/243)  IGHV3-7*01   137  .................A....................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  V  F  L  Q  M  N  S  L  R  A  E  E  T  A  V  Y  F  C  V  G  G  G  G  W  Q  P  D  
                    Query_11242  181  AGAATTCAGTGTTTCTGCAAATGAATAGCCTGAGAGCCGAGGAAACGGCTGTGTACTTTTGTGTGGGGGGGGGGGGATGGCAACCCGACT  270
V  93.4% (227/243)  IGHV3-7*01   227  ....C...C...A............C.................C...........T.AC....---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (6/6)     IGHD3-16*01  17   ---------------------------------------------------------------......---------------------  22
J  100.0% (38/38)   IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                
                                      Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11242  271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  304
J  100.0% (38/38)   IGHJ4*02     13   ..................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_339689

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           319     2e-89
IGHD6-19*01                                                                                           21.8    0.038
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCG	GTGGCTGGTAC	GG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCGGTGGCTGGTACGGCTAC	ARGGGWYGY	239	265	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	20	4	0	83.3
FR3-IMGT	125	238	114	108	6	0	94.7
CDR3-IMGT (germline)	239	245	7	6	1	0	85.7
Total	N/A	N/A	232	218	14	0	94


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  F  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 
                    Query_11243  14   TGTGCAGCCTCTGGATTCACCTTCAGTTTCTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATT  103
V  94.0% (218/232)  IGHV3-48*03  64   ...........................AGT............................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  G  G  A  N  I  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  G  R  N  S  L  Y  L 
                    Query_11243  104  AGTAGTGGTGGTGCTAACATATACTACGCAGATTCTGTGAGGGGCCGTTTCACCATCTCCAGAGACAACGGCAGGAACTCACTGTATCTG  193
V  94.0% (218/232)  IGHV3-48*03  154  ......A.....AG..C...............C.......A......A......................C..A................  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><--------CDR3-IMGT-------->                  
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  G  W  Y  G  Y  W  G  Q  G  T  L 
                    Query_11243  194  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTATTGTGCGCGAGGCGGTGGCTGGTACGGCTACTGGGGCCAGGGAACCCTG  283
V  94.0% (218/232)  IGHV3-48*03  244  .........................................C......A...--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (11/11)   IGHD6-19*01  11   -------------------------------------------------------...........------------------------  21
J  100.0% (38/38)   IGHJ4*02     11   --------------------------------------------------------------------......................  32

                                                      
                                       V  T  V  S  S  
                    Query_11243  284  GTCACCGTCTCCTCAG  299
J  100.0% (38/38)   IGHJ4*02     33   ................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_85584

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           293     2e-81
IGHD3-16*02                                                                                           16.1    2.3  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD3-16*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGTGTTCCAATTGGTG	GTTATCGGTAT	GCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGTGTTCCAATTGGTGGTTATCGGTATGCCTTCGATCCC	ARGRVPIGGYRYAFDP	255	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	140	36	16	8	12	44.4
FR3-IMGT	141	254	114	104	10	0	91.2
CDR3-IMGT (germline)	255	261	7	7	0	0	100
Total	N/A	N/A	261	226	23	12	86.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11244  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTACTTATAGTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  86.6% (226/261)  IGHV3-30*04  47   .....................................C.......GC...GC......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------------CDR2-IMGT------------><---------------------------------------
                                      E  W  V  A  V  I  A  Y  D  G  N  T  Y  Y  A  D  S  Y  Y  A  D  S  V  K  G  R  F  T  I  S  
                    Query_11244  91   AGTGGGTGGCAGTTATTGCATATGATGGCAATACATACTACGCAGACTCCTACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCA  180
V  86.6% (226/261)  IGHV3-30*04  137  ................AT..........A.G..------------.TAAA..........................A.............  214
                                      E  W  V  A  V  I  S  Y  D  G  S              N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  

                                      -------------FR3-IMGT----------------------------------------------------><---------------
                                      R  D  N  S  R  D  T  L  Y  L  Q  M  N  R  L  S  P  E  D  T  A  V  Y  Y  C  A  R  G  R  V  
                    Query_11244  181  GAGACAATTCCAGGGACACCCTCTATCTGCAAATGAACCGCCTGAGCCCTGAGGACACCGCTGTCTATTACTGTGCGAGAGGTCGTGTTC  270
V  86.6% (226/261)  IGHV3-30*04  215  ............A.A....G..G...............A.......AG..........G.....G................---------  295
                                      R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R           

                                      ----CDR3-IMGT------------------>                                  
                                      P  I  G  G  Y  R  Y  A  F  D  P  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_11244  271  CAATTGGTGGTTATCGGTATGCCTTCGATCCCTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  336
D  90.9% (10/11)    IGHD3-16*02  24   ---------.......T...----------------------------------------------  34
J  95.3% (41/43)    IGHJ5*02     9    -----------------------.....C........................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_85585

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            358     4e-101
IGHD3-10*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAC	TATTACTATGCTTCGGGGAATTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTATTACTATGCTTCGGGGAATTATTTTGACTCC	ARGHYYYASGNYFDS	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11245  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAACCCCCAGGGAAGGGGCTG  90
V  96.4% (238/247)  IGHV4-4*02   49   .......................................................................G..................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  A  E  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_11245  91   GAGTGGATTGCGGAAATCTATCATAGTGGGAGCACCTACTACAATCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAG  180
V  96.4% (238/247)  IGHV4-4*02   139  ..........G.........................A.......C....................C................A...C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  Y  Y  Y  A  S  G 
                    Query_11245  181  AACCAGTTCTCCCTGAAGCTGAGATCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTATTACTATGCTTCGGGG  270
V  96.4% (238/247)  IGHV4-4*02   229  .......................C........C..................................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  91.7% (22/24)    IGHD3-10*01  2    ------------------------------------------------------------------------..........G.......  19

                                      -------------->                                  
                                       N  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11245  271  AATTATTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
D  91.7% (22/24)    IGHD3-10*01  20   .G....-------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_85587

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            358     4e-101
IGHD6-19*01                                                                                           18.0    0.59  
IGHJ4*02                                                                                              58.4    9e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGTCCAC	TATAGTATTAGCTGGTAC	CACC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGTCCACTATAGTATTAGCTGGTACCACCTTGACTTC	ARGVHYSISWYHLDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  F  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11246  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTGACTATTTCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-7*01   47   ............................................AG.....GG.....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  N  E  Q  Y  Y  L  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11246  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAATGAGCAATATTATTTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (239/249)  IGHV3-7*01   137  ..............................G....A....C...G.............................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  V  H  Y  S  I  S  
                    Query_11246  181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGAGTCCACTATAGTATTAGCT  270
V  96.0% (239/249)  IGHV3-7*01   227  ....C................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  83.3% (15/18)    IGHD6-19*01  4    -----------------------------------------------------------------------------.....C.G.G...  16

                                      ---------------->                                  
                                      W  Y  H  L  D  F  W  G  Q  G  T  L  V  S  A  S  S  
                    Query_11246  271  GGTACCACCTTGACTTCTGGGGCCAGGGAACCCTGGTCAGTGCCTCCTCAG  321
D  83.3% (15/18)    IGHD6-19*01  17   .....----------------------------------------------  21
J  90.5% (38/42)    IGHJ4*02     7    ---------......A.......................CC.T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_85580

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           299     2e-83
IGHD3-3*01                                                                                            21.8    0.042
IGHJ5*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGATGGGGAAGAG	ACGATTTTTGG	GATGGGGTGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGATGGGGAAGAGACGATTTTTGGGATGGGGTGAGGTTCGACTCT	ARARWGRDDFWDGVRFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	220	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  G  S  G  L  S  L  R  G  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11247  1    GGTCCCTGAGACTCTCCTGTACAGGCTCTGGACTCAGTCTCAGAGGCTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTG  90
V  88.4% (220/249)  IGHV3-48*03  47   ....................G...C.......T...CCT....TA.T...........C.............................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  S  S  G  S  T  R  H  Y  A  D  S  L  K  G  R  L  T  I  S  R  D  N  A  
                    Query_11247  91   AATGGATTTCATACATCAGTAGTAGCGGCAGTACCAGACATTACGCAGACTCTTTGAAGGGCCGACTCACCATCTCCAGAGACAACGCCA  180
V  88.4% (220/249)  IGHV3-48*03  137  .G...G..........T........T..T.......T.T.C............G...........T........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      N  N  S  V  Y  L  Q  M  N  S  L  R  V  A  D  T  A  V  Y  H  C  A  R  A  R  W  G  R  D  D  
                    Query_11247  181  ACAATTCAGTATATCTGCAGATGAACAGCCTGAGAGTCGCGGACACGGCTGTTTATCACTGTGCGAGAGCCCGATGGGGAAGAGACGATT  270
V  88.4% (220/249)  IGHV3-48*03  227  .G..C...C.G........A................C..A................T............---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-3*01   6    ------------------------------------------------------------------------------------......  11

                                      IMGT--------------------->                                  
                                      F  W  D  G  V  R  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_11247  271  TTTGGGATGGGGTGAGGTTCGACTCTTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  330
D  100.0% (11/11)   IGHD3-3*01   12   .....-------------------------------------------------------  16
J  93.3% (42/45)    IGHJ5*01     7    ---------------..........C........A....C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_85581

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           339     2e-95
IGHD3-16*01                                                                                           14.1    8.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCC	TTTGGGG	TA	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCTTTGGGGTAAACTGGTTCGACCCC	ARAFGVNWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  D  Y  M  G  W  I  R  Q  A  P  G  K  G  L  
                    Query_11248  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACGACTACATGGGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-11*01  47   ...............................................T........A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  G  Y  T  G  T  T  I  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_11248  91   AGTGGCTTTCATATATTGGTTATACTGGAACTACCATATATTATGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  93.9% (232/247)  IGHV3-11*01  137  .....G.......C...A..AG..G...T.G.........C..C...........................A..................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  F  G  V  N  W  F  
                    Query_11248  181  AGAACTCACTGTTTCTGCAAATGAACAGCCTCAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGGGCCTTTGGGGTAAACTGGTTCG  270
V  93.9% (232/247)  IGHV3-11*01  227  ............A..................G...................................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  15   -----------------------------------------------------------------------.......------------  21
J  93.9% (46/49)    IGHJ5*02     3    --------------------------------------------------------------------------------..........  12

                                      ---->                                  
                                      D  P  W  G  Q  G  A  L  V  P  V  S  P  
                    Query_11248  271  ACCCCTGGGGCCAGGGAGCCCTGGTCCCCGTCTCCCCAG  309
J  93.9% (46/49)    IGHJ5*02     13   .................A........A........T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_85582

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           397     8e-113
IGHD3-22*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAC	AGTAGTAGTTATT	CTTCCGTAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGTAGTAGTTATTCTTCCGTAAACTTTGACTAC	ARHSSSYSSVNFDY	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	68	7	0	90.7
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	18	6	0	75
FR3-IMGT	178	291	114	112	2	0	98.2
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	294	274	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  A  T  G  D  T  L  S 
                    Query_11249  4    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAAGTCTCCTGTAGGGCTACCGGAGACACCCTCAGC  93
V  93.2% (274/294)  IGHV1-69*01  1    .....G.................G................................G........C.A....T.T....G....T.....  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  H  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  V  L  H  I  T  N  Y 
                    Query_11249  94   AACCATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGAATCATCCCTGTCCTTCATATAACAAACTAT  183
V  93.2% (274/294)  IGHV1-69*01  91   .G.T.......................................................G.........A..T..GG..C.G.......C  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_11249  184  GCACAGAAGTTCCAGGGCAGAGTCACAATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGAC  273
V  93.2% (274/294)  IGHV1-69*01  181  ..........................G...............................................................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  H  S  S  S  Y  S  S  V  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_11249  274  ACGGCCGTGTATTACTGTGCGAGACACAGTAGTAGTTATTCTTCCGTAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  363
V  93.2% (274/294)  IGHV1-69*01  271  ........................------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  92.3% (12/13)    IGHD3-22*01  14   ---------------------------......G......--------------------------------------------------  26
J  100.0% (45/45)   IGHJ4*02     4    -------------------------------------------------.........................................  44

                                          
                                       S  
                    Query_11249  364  TCAG  367
J  100.0% (45/45)   IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_85588

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-10*01                                                                                           10.3    119  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACA	GGGGA	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACAGGGGATACTACGGTATGGACGTC	ARDDRGYYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_11250  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTATTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   .....................................................C.A.....G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  H  Y  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S 
                    Query_11250  91   CTGGAGTGGATTGGGAACATCCATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ...............T.....T...................C.................G........T.....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  E  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  D  D  R  G  Y  Y  G 
                    Query_11250  181  AAGAACCAGTTCTCCCTGGAGCTGACCTCTATGACAGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGATGACAGGGGATACTACGGT  270
V  94.4% (237/251)  IGHV4-31*03  229  ..................A......G....G....T.................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------------.....---------  20
J  96.0% (48/50)    IGHJ6*02     12   ---------------------------------------------------------------------------------.........  20

                                      -------->                                
                                       M  D  V  W  G  Q  G  I  T  V  T  V  S  S
                    Query_11250  271  ATGGACGTCTGGGGCCAAGGGATTACGGTCACCGTCTCCTC  311
J  96.0% (48/50)    IGHJ6*02     21   ......................CC.................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_190702

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           389     2e-110
IGHD3-10*01                                                                                           19.9    0.18  
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGGTT	TTACTATGGCTCG	CCCGTAGT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCGGTTTTACTATGGCTCGCCCGTAGTCTGGTACTTCGACCTC	ARDRFYYGSPVVWYFDL	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	270	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  T  F  S  D  Y
                    Query_11251  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAGCGACTA  90
V  92.8% (270/291)  IGHV1-69*01  6    ..................G.......................................................G..........AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  Q  I  V  P  V  F  G  T  T  T  Y  A  E
                    Query_11251  91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACAGATCGTCCCTGTCTTTGGTACGACAACCTACGCAGA  180
V  92.8% (270/291)  IGHV1-69*01  96   ....................................................GG....A.....A..........AG...A.......C.  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        D  L  Q  G  R  V  K  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_11251  181  GGACTTACAGGGCAGAGTCAAAATCACCGCGGACGAATCCACTAGCACAGCCTACATGGAGCTGAGTAGCCTGAGATCTGAGGACACGGC  270
V  92.8% (270/291)  IGHV1-69*01  186  .A.G..C.............CG..T.................G.......................C.......................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  D  R  F  Y  Y  G  S  P  V  V  W  Y  F  D  L  W  G  R  G  T  L  V  T  V
                    Query_11251  271  CGTCTATTACTGTGCGAGAGACCGGTTTTACTATGGCTCGCCCGTAGTCTGGTACTTCGACCTCTGGGGCCGTGGCACCCTGGTCACTGT  360
V  92.8% (270/291)  IGHV1-69*01  276  ...G.................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  92.3% (12/13)    IGHD3-10*01  4    ---------------------------.........T...--------------------------------------------------  16
J  98.0% (49/50)    IGHJ2*01     4    ------------------------------------------------............T.............................  45

                                              
                                        S  S  
                    Query_11251  361  CTCCTCAG  368
J  98.0% (49/50)    IGHJ2*01     46   ........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_209048

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           343     2e-96
IGHD3-16*01                                                                                           10.3    115  
IGHJ6*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TATGA	CGGG	GGTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATATGACGGGGGTAAGGACGTC	TRYDGGKDV	244	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  I  V  S  G  D  S  I  S  T  T  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_11252  1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGACTCCATCAGCACTACTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.0% (234/249)  IGHV4-39*01  49   ...................C...........G...........G..G...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  G  I  Y  Y  T  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11252  91   CTGGAGTGGATTGGGGGTATCTATTATACTGGGAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  94.0% (234/249)  IGHV4-39*01  139  ...............A............G.....G..........................................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                       K  N  Q  F  Y  L  E  L  S  S  V  T  A  A  D  T  A  A  Y  F  C  T  R  Y  D  G  G  K  D  V 
                    Query_11252  181  AAGAACCAGTTTTACCTGGAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGCGTATTTTTGTACGAGATATGACGGGGGTAAGGACGTC  270
V  94.0% (234/249)  IGHV4-39*01  229  ...........C.C....A.................................T.....AC...G.....---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-16*01  5    ---------------------------------------------------------------------.....----------------  9
J  95.6% (43/45)    IGHJ6*02     18   ------------------------------------------------------------------------------....T.......  29

                                                                       
                                       W  G  Q  G  T  T  V  T  A  S  S 
                    Query_11252  271  TGGGGCCAAGGGACCACGGTCACCGCCTCCTCA  303
J  95.6% (43/45)    IGHJ6*02     30   .........................T.......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_209049

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           422     2e-120
IGHD2-2*02                                                                                            19.9    0.18  
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAAAGTGGCGGGGA	ACCAGCTGTTATA	AAGAGCGCTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCC	ARGKWRGTSCYKERCWFDP	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	279	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  S  N  Y
                    Query_11253  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTAGCAACTA  90
V  96.9% (279/288)  IGHV5-51*03  6    .................................................................G...........G.....C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  R  Y  R  P
                    Query_11253  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATAATCTATCCTGGTGACTCTGAGACCAGATACAGACC  180
V  96.9% (279/288)  IGHV5-51*03  96   ........G.............................................C....................T...........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11253  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (279/288)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  G  K  W  R  G  T  S  C  Y  K  E  R  C  W  F  D  P  W  G  Q  G  T  L  V
                    Query_11253  271  CATGTATTATTGTGCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  360
V  96.9% (279/288)  IGHV5-51*03  276  .........C........------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  92.3% (12/13)    IGHD2-2*02   17   ----------------------------------........C....-------------------------------------------  29
J  100.0% (47/47)   IGHJ5*02     5    ---------------------------------------------------------.................................  37

                                                    
                                        T  V  S  S  
                    Query_11253  361  CACCGTCTCCTCAG  374
J  100.0% (47/47)   IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_209046

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD3-16*01                                                                                           12.2    35    
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTTGAGG	GATTAC	CAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTAC	ARSLRDYQPFYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_11254  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  98.3% (284/289)  IGHV5-51*03  6    .............................................................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_11254  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  A  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11254  181  GTCCTTCCAAGGCCAGGCCACCGTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACTGC  270
V  98.3% (284/289)  IGHV5-51*03  186  .................T....A................................................................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  S  L  R  D  Y  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_11254  271  CATGTATTACTGTGCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  359
V  98.3% (284/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  8    ----------------------------......-------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ------------------------------------------....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_209047

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           389     2e-110
IGHD3-9*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACACCATACGCCGGGT	TTACGATCTTTTGACTGG	N/A	TACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACACCATACGCCGGGTTTACGATCTTTTGACTGGTACCTTGACTCC	ARGHHTPGLRSFDWYLDS	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  R  Y 
                    Query_11255  2    CAGCTGGTGCAGTCTGGAGGTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACGTTTAGCAGATAT  91
V  93.1% (269/289)  IGHV1-18*01  7    ...................C...G.....................................................C....C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  K  N  G  N  T  N  Y  A  Q 
                    Query_11255  92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTAAAAATGGAAACACAAATTACGCACAG  181
V  93.1% (269/289)  IGHV1-18*01  97   ........C....................................................C.T.C.....T........C..T......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  V  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  F  D  D  T  A 
                    Query_11255  182  AAGGTCCAGGGAAGAGTCACCATGACGACAGACACATCCACGAGTACAGCCTACATGGAGCTGCGGAGCCTGAGATTTGACGACACGGCC  271
V  93.1% (269/289)  IGHV1-18*01  187  ...C.......C..............C.................C..................A............C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       L  Y  F  C  A  R  G  H  H  T  P  G  L  R  S  F  D  W  Y  L  D  S  W  G  Q  G  T  L  V  T 
                    Query_11255  272  CTGTATTTCTGTGCGAGAGGACACCATACGCCGGGTTTACGATCTTTTGACTGGTACCTTGACTCCTGGGGCCAGGGAACCCTGGTCACC  361
V  93.1% (269/289)  IGHV1-18*01  277  G......A...........-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  94.4% (17/18)    IGHD3-9*01   4    ------------------------------------.......A..........------------------------------------  21
J  95.7% (44/46)    IGHJ4*02     3    ------------------------------------------------------...T......A.........................  38

                                                
                                       V  S  S  
                    Query_11255  362  GTCTCCTCAG  371
J  95.7% (44/46)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_209045

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           272     2e-75
IGHD6-19*01                                                                                           16.1    2.4  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCAGTATCA	AGTGGCTG	CCATCAGAACTCCCCCTTGG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCAGTATCAAGTGGCTGCCATCAGAACTCCCCCTTGGGACTCC	ARGQYQVAAIRTPPWDS	265	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	150	48	19	2	27	39.6
FR3-IMGT	151	264	114	101	13	0	88.6
CDR3-IMGT (germline)	265	272	8	8	0	0	100
Total	N/A	N/A	272	225	20	27	82.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_11256  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAATTGGATCCGCCAGTCCCCAGGGAAGGGTCTGGAG  90
V  82.7% (225/272)  IGHV4-34*01  49   .......................................................GC............C.............G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-------------------CDR2-IMGT------------------><-----------------------------
                                       W  I  G  E  I  N  H  D  V  G  S  W  E  F  K  N  R  G  S  A  D  Y  N  P  S  L  K  S  R  V 
                    Query_11256  91   TGGATTGGAGAAATCAATCATGATGTAGGCAGCTGGGAATTCAAGAATCGTGGAAGCGCCGACTACAACCCGTCCCTCAAGAGTCGAGTC  180
V  82.7% (225/272)  IGHV4-34*01  139  ........G............A---------------------------........A..A.............................  201
                                       W  I  G  E  I  N  H                             S  G  S  T  N  Y  N  P  S  L  K  S  R  V 

                                      -----------------------FR3-IMGT----------------------------------------------------><-----
                                       T  I  S  L  D  T  S  K  T  Q  F  S  L  R  M  T  S  V  T  P  A  D  T  G  V  Y  Y  C  A  R 
                    Query_11256  181  ACCATTTCCTTGGACACGTCCAAGACCCAGTTCTCCCTGAGAATGACCTCTGTGACCCCCGCGGACACGGGTGTCTATTACTGTGCGAGA  270
V  82.7% (225/272)  IGHV4-34*01  202  .....A..AG.A.............A..............AGC...G..........G............C...G...............  291
                                       T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R 

                                      ---------------CDR3-IMGT-------------------->                                  
                                       G  Q  Y  Q  V  A  A  I  R  T  P  P  W  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_11256  271  GGCCAGTATCAAGTGGCTGCCATCAGAACTCCCCCTTGGGACTCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  349
V  82.7% (225/272)  IGHV4-34*01  292  ..-----------------------------------------------------------------------------  293
                                       G                                                                             
D  100.0% (8/8)     IGHD6-19*01  10   -----------........------------------------------------------------------------  17
J  95.0% (38/40)    IGHJ4*02     9    ---------------------------------------....A..............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_209043

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11257  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11257  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_11257  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11257  271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_209041

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     3e-90
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	242	26	6	88.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_11258  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.3% (242/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_11258  91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.3% (242/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_11258  181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.3% (242/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_11258  271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.3% (242/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_80038

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           339     2e-95
IGHD1-20*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGAATACAA	GTATAAC	GGAATA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGAATACAAGTATAACGGAATAGGTATGGACGTC	TRSEYKYNGIGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11259  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTAAGTAATAATTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (231/245)  IGHV3-53*01  47   ........................................C....GC..C.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_11259  91   AGTGGGTCTCAGTTATTTATAGTGGTGGTACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.3% (231/245)  IGHV3-53*01  137  ......................C.......G..............................A............................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      T  T  L  Y  L  Q  M  N  S  L  R  A  E  D  S  A  V  Y  Y  C  T  R  S  E  Y  K  Y  N  G  I  
                    Query_11259  181  CCACACTGTATCTTCAAATGAACAGTTTGAGAGCCGAGGACTCGGCCGTGTATTACTGTACGAGATCAGAATACAAGTATAACGGAATAG  270
V  94.3% (231/245)  IGHV3-53*01  227  A...G....................CC..............A.................G.....-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD1-20*01  2    ----------------------------------------------------------------------------.......-------  8
J  100.0% (45/45)   IGHJ6*02     18   -----------------------------------------------------------------------------------------.  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11259  271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (45/45)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_334108

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAACA	TATGACT	TATAGCAGT	AGTCCATTA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATATGACTTATAGCAGTAGTCCATTAGACTAC	AKHMTYSSSPLDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	13	8	0	61.9
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	222	29	0	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  A  S  V  S  S  G  D  Y  Y  W  G  W  I  R  Q  P  P  G  R  G 
                    Query_11260  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCGTCAGTAGTGGTGACTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAGGGGG  90
V  88.4% (222/251)  IGHV4-39*01  49   ..................A............G....A....C...A..AGT..................................A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  Y  N  T  R  Y  P  Y  Y  S  L  S  L  K  S  R  V  T  I  S  V  D  S  S 
                    Query_11260  91   CTGGAGTGGCTTGGGAGTATCTATAATACTAGATATCCCTACTATAGTTTGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACTCGTCC  180
V  88.4% (222/251)  IGHV4-39*01  139  .........A..............T...G.G.GAGCA.......C.ACCC..................................A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  E  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  H  M  T  Y  S  S  S 
                    Query_11260  181  AAGAACGAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTTTATTTCTGTGCGAAACATATGACTTATAGCAGTAGT  270
V  88.4% (222/251)  IGHV4-39*01  229  ......C............A.................................G....A........G...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD6-19*01  4    ------------------------------------------------------------------------------.........---  12

                                      ----------->                                  
                                       P  L  D  Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_11260  271  CCATTAGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCTTCAG  316
J  95.0% (38/40)    IGHJ4*02     9    ------.............A.....................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_168050

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           313     1e-87
IGHD3-10*01                                                                                           10.3    116  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGA	CTTCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGACTTCAGGCCTTTGACTCC	ARGGLQAFDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  G  G  F  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_11261  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAACAGTGGTGGATTCTACTGGACTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  90.0% (225/250)  IGHV4-31*03  49   .......................C................G.........T.A........GC...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  Y  I  F  Y  T  G  H  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  L  D  T  S 
                    Query_11261  91   CTAGGGTGGATTGGTTACATCTTTTACACTGGACACACCTACTACAATCCGTCCCTCAGGAGTCGACTTACCATTTCACTGGACACATCT  180
V  90.0% (225/250)  IGHV4-31*03  139  ..G.A.........G.......A.....G...GAG............C..........A.......G.......A...G.A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       E  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  L  Q  A  F  D 
                    Query_11261  181  GAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGGGGACTTCAGGCCTTTGAC  270
V  90.0% (225/250)  IGHV4-31*03  229  A...................G.....C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------.....---------------  20
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11261  271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.7% (43/44)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_80033

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_11262  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_11262  91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_11262  181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_11262  271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_334105

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            347     7e-98
IGHD3-3*01                                                                                            12.2    33   
IGHJ4*01                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD3-3*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCAG	CCG	TTACGA	GATCA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGCAGCCGTTACGAGATCAACTTTGAATAT	ARSRYEINFEY	263	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	43	3	0	93.5
CDR1-IMGT	47	76	30	24	6	0	80
FR2-IMGT	77	127	51	49	2	0	96.1
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	104	10	0	91.2
CDR3-IMGT (germline)	263	270	8	7	1	0	87.5
Total	N/A	N/A	270	246	24	0	91.1


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  S  L  P  E  F  S  L  N  T  D  G  V  A  V  S  W  I  R
                    Query_11263  1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCAGCCTCCCTGAGTTCTCCCTCAACACTGATGGAGTGGCTGTGAGTTGGATCCG  90
V  91.1% (246/270)  IGHV2-5*01   30   ......................................C.T..T...G......A....G....AG........G....G.C........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  G  D  Q  R  Y  S  P  S  L  R  S  R  L  T
                    Query_11263  91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGGTGATCAGCGATACAGCCCATCTCTGAGGAGCAGGCTCAC  180
V  91.1% (246/270)  IGHV2-5*01   120  ..................................................A....A....C................A............  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  K  D  T  S  K  N  Q  V  V  L  K  M  T  N  M  E  P  V  D  T  G  T  Y  F  C  A  R  S
                    Query_11263  181  CATCAGTAAGGACACCTCCAAAAACCAGGTGGTCCTGAAGATGACCAACATGGAGCCTGTGGACACAGGCACATATTTCTGTGCACGCAG  270
V  91.1% (246/270)  IGHV2-5*01   210  .....CC.............................T.CA..............C.............C........A........A...  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                      ----CDR3-IMGT----------->                              
                                        R  Y  E  I  N  F  E  Y  W  G  R  G  T  L  V  T  V  S 
                    Query_11263  271  CCGTTACGAGATCAACTTTGAATATTGGGGTCGCGGAACCCTGGTCACCGTCTCC  325
D  100.0% (6/6)     IGHD3-3*01   4    ---......----------------------------------------------  9
J  87.8% (36/41)    IGHJ4*01     4    --------------.......C..C.....C.AA.....................  44


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_334106

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            425     3e-121
IGHD3-9*01                                                                                            18.0    0.67  
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGTCAT	TTACGATAT	ACGGGCCGGGT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTCATTTACGATATACGGGCCGGGTCTGGTTCGACCCC	ARGGHLRYTGRVWFDP	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	294	283	11	0	96.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  
                    Query_11264  3    AGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCG  92
V  96.3% (283/294)  IGHV1-2*04   2    ....G........G............................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  L  N  S  G  G  T  K  Y  
                    Query_11264  93   ACTACTATGTGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGTGGATCAACCTTAACAGTGGTGGCACAAAGTATG  182
V  96.3% (283/294)  IGHV1-2*04   92   G.......A..............................................A..........C..................C....  181
                                      G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  N  R  L  R  S  D  D  
                    Query_11264  183  CACAGAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAACTGAACAGACTGAGATCTGACGACA  272
V  96.3% (283/294)  IGHV1-2*04   182  ................................................................G....G...G................  271
                                      A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      T  A  V  Y  Y  C  A  R  G  G  H  L  R  Y  T  G  R  V  W  F  D  P  W  G  Q  G  D  L  V  T  
                    Query_11264  273  CGGCCGTATATTACTGTGCGAGAGGGGGTCATTTACGATATACGGGCCGGGTCTGGTTCGACCCCTGGGGCCAGGGAGACCTGGTCACCG  362
V  96.3% (283/294)  IGHV1-2*04   272  .......G................------------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                    
D  100.0% (9/9)     IGHD3-9*01   4    --------------------------------.........-------------------------------------------------  12
J  95.7% (45/47)    IGHJ5*02     5    ----------------------------------------------------.........................AC...........  42

                                               
                                      V  S  S  
                    Query_11264  363  TCTCCTCAG  371
J  95.7% (45/47)    IGHJ5*02     43   .........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_334107

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            319     2e-89
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATC	TAGCAACACCTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGCAACACCTGGTACTCGGGGTTTTGACTAC	ARHLATPGTRGFDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	104	10	0	91.2
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	225	21	0	91.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  V  G  S  I  T  S  A  N  W  W  S  W  V  R  Q  P  P  G  R  G  L 
                    Query_11265  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGTTGGCTCCATCACCAGTGCTAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAGGGGGCTG  90
V  91.5% (225/246)  IGHV4-4*02   49   ............................G...........G....AG...C...............................A.......  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  F  L  G  G  R  T  N  Y  S  P  S  L  E  S  R  V  T  L  S  R  D  T  S  K 
                    Query_11265  91   GAGTGGATTGGGGAAGTCTTTCTTGGTGGGAGGACCAACTACAGCCCGTCCCTAGAGAGTCGAGTCACCCTGTCAAGAGACACGTCCAAG  180
V  91.5% (225/246)  IGHV4-4*02   139  ...............A...A..A.A.......C..........A.........CA..............A.A...GT.....A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  A  T  P  G  T  R 
                    Query_11265  181  AACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGAGACATCTAGCAACACCTGGTACTCGG  270
V  91.5% (225/246)  IGHV4-4*02   229  ................A.................................G...............------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  87.5% (14/16)    IGHD6-13*01  6    ----------------------------------------------------------------------.....G..G.......----  21

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11265  271  GGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (43/43)   IGHJ4*02     6    ---...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_334100

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           279     3e-77
IGHD3-10*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGGACATGTTAG	GGTTCGGGGA	CTTGGTTCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACATGTTAGGGTTCGGGGACTTGGTTCCCTTTGCCCAC	ARDMLGFGDLVPFAH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	212	34	0	86.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  S  Y  A  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11266  1    GGTCCCTGAGACTCTCCTGTGCGGTCTCTGGATTCACCTTTTCCAGTTATGCCATCTCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  86.2% (212/246)  IGHV3-23*01  47   ......................A.C................AG...C........GAG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  G  D  S  A  A  K  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_11266  91   AGTGGGTCTCAGGCATCGGTGACAGTGCTGCCAAGACATATTACGCAGACTCCGTGAGGGGACGATTCACCATCTCCAGAGACAATTCCA  180
V  86.2% (212/246)  IGHV3-23*01  137  ............CT..TA...GT....G..GT.GC.....C................A...C..G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  M  T  V  Y  L  Q  M  N  S  L  R  P  E  D  T  A  M  Y  F  C  A  R  D  M  L  G  F  G  D  
                    Query_11266  181  GAATGACGGTATATCTGCAAATGAACAGTCTGAGACCCGAGGACACGGCCATGTATTTCTGTGCGAGGGACATGTTAGGGTTCGGGGACT  270
V  86.2% (212/246)  IGHV3-23*01  227  AG.AC...C.G.................C......G..............G.A....A........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD3-10*01  11   ------------------------------------------------------------------------------..........--  20

                                      ---------------->                                  
                                      L  V  P  F  A  H  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_11266  271  TGGTTCCCTTTGCCCACTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  321
J  90.9% (40/44)    IGHJ4*02     5    -------.....A.T..............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_334101

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           332     4e-93
IGHD1-26*01                                                                                           10.3    123  
IGHJ6*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAAGCTCTTCGGTTA	ATAGT	N/A	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCAAGCTCTTCGGTTAATAGTTACGACTACTACGGTATGGACGTC	ARSSSSVNSYDYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11267  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAGTAATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGACTGG  90
V  92.7% (230/248)  IGHV3-48*03  47   ....................................C...C....G.................................G.....G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  A  V  F  I  S  V  S  G  R  N  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  G  N  A  
                    Query_11267  91   AGTGGGCTGTATTCATTAGTGTTAGTGGTAGGAACATATACTACGCGGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGGCAACGCCA  180
V  92.7% (230/248)  IGHV3-48*03  137  ......T.TC..A.......AG.........T.C............A.................A................A........  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  S  S  S  V  N  S  
                    Query_11267  181  AGAACTCACTGTATCTGCAGATGAACAGCCTGAGAGCCGAAGACACGGCTGTTTATTACTGTGCGAGATCAAGCTCTTCGGTTAATAGTT  270
V  92.7% (230/248)  IGHV3-48*03  227  ...................A....................G...........................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  4    ------------------------------------------------------------------------------------.....-  8
J  96.5% (55/57)    IGHJ6*02     6    -----------------------------------------------------------------------------------------.  6

                                      GT-------------------->                                 
                                      Y  D  Y  Y  G  M  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_11267  271  ACGACTACTACGGTATGGACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  326
J  96.5% (55/57)    IGHJ6*02     7    ..T...........................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_334102

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTTTATTACCTCC	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTATTACCTCCACGGTATGGACGTC	ARHGDDTGGYLYYLHGMDV	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	74	0	0	100
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	281	14	0	95.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  
                    Query_11268  3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTTCCA  92
V  95.3% (281/295)  IGHV5-51*01  2    ..................................................................................C...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  P  R  Y  
                    Query_11268  93   CTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATCCCAGATACA  182
V  95.3% (281/295)  IGHV5-51*01  92   GC..C.......G.................................................T.................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  
                    Query_11268  183  GTCCGTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACA  272
V  95.3% (281/295)  IGHV5-51*01  182  .C.........C.....................C...............C...........................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  H  G  M  D  V  W  G  Q  G  T  
                    Query_11268  273  CCGCCATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTATTACCTCCACGGTATGGACGTCTGGGGCCAAGGGACCA  362
V  95.3% (281/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  85.7% (12/14)    IGHD1-26*01  4    ---------------------------------...G....A.....-------------------------------------------  17
J  97.9% (46/47)    IGHJ6*02     16   ------------------------------------------------------------..............................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_11268  363  CGGTCACCGTCTCGTCA  379
J  97.9% (46/47)    IGHJ6*02     46   .............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_334103

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_11269  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*01  49   .......................................AG..G.T..................................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  G  R  V  A  I  S  V  D  R  S  N  N 
                    Query_11269  91   TGGATTGGATATATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGGGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  93.0% (227/244)  IGHV4-59*01  139  ........G...................G.....A...................A........A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W 
                    Query_11269  181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGG  270
V  93.0% (227/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------------------------------------------....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_11269  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (35/35)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_190704

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     3e-115
IGHD6-25*01                                                                                           14.1    9.4   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAGG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTC	ARQSSAGRTRYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  D  Y
                    Query_11270  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATTCGACTTTACCGACTA  90
V  94.5% (275/291)  IGHV5-51*01  6    ....................................C.............................T.......A.AG.......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_11270  91   CTGGATCGTCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACGAGATACAGTCC  180
V  94.5% (275/291)  IGHV5-51*01  96   ........G..............T......................................................C........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_11270  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (275/291)  IGHV5-51*01  186  .............................C.............A.......................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  F  C  A  R  Q  S  S  A  G  R  T  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_11270  271  CATGTATTTTTGTGCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTC  360
V  94.5% (275/291)  IGHV5-51*01  276  ........AC...........---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------............................................C..  61

                                       
                                       
                    Query_11270  361  A  361
J  97.9% (47/48)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_168055

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            402     3e-114
IGHD3-10*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGAC	TGGTTCGGGGA	CTT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTAC	ARVTGSGTYSFDY	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	73	2	0	97.3
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	102	12	0	89.5
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	276	19	0	93.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  G 
                    Query_11271  2    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCGGC  91
V  93.6% (276/295)  IGHV1-8*02   1    .....G.................G...............................................................AC.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  D  Y 
                    Query_11271  92   AGCTATGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATGAATCCTAACAGTGGGAACACAGACTAT  181
V  93.6% (276/295)  IGHV1-8*02   91   ..............................A..................................C...........T.......G....  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  Y  M  E  L  S  S  L  G  S  A  D 
                    Query_11271  182  GCACAGAAGTTCCGGGGCAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCTACATGGAGCTGAGTAGTCTGGGATCTGCCGAC  271
V  93.6% (276/295)  IGHV1-8*02   181  .............A.......................A...C..C.T........................C..C...A......AG...  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  Y  C  A  R  V  T  G  S  G  T  Y  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_11271  272  ACGGCCGTCTATTACTGTGCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  361
V  93.6% (276/295)  IGHV1-8*02   271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (11/11)   IGHD3-10*01  10   -----------------------------...........--------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    -------------------------------------------...A......C....................................  47

                                       
                                       
                    Query_11271  362  G  362
J  95.8% (46/48)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_342644

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            266     2e-73
IGHD2-21*02                                                                                           29.5    2e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-21*02	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCTGT	TGCCTCGCT	TATTGTGCTGGTGACTGC	ATCCGCGATAAAACGGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TGCCTCGCTTATTGTGCTGGTGACTGCATCCGCGATAAAACGGCCTACTTTGACTAC	ASLIVLVTASAIKRPTLTT	242	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	55	27	22	4	1	81.5
FR2-IMGT	56	106	51	44	7	0	86.3
CDR2-IMGT	107	127	21	18	3	0	85.7
FR3-IMGT	128	241	114	101	13	0	88.6
Total	N/A	N/A	242	208	33	1	86


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S   V  S  P  S  S  A  V  T  G  G  L  G  S  A  R  P  Q  L  R  G 
                    Query_11272  1    GGTCCCTGAGACTCTCCTGTGCTGTCTCTG-TGTCTCCGTCATCAGCAGTAACTGGTGGACTTGGGTCCGCCAGACCCCAACTAAGGGGC  89
V  86.0% (208/242)  IGHV4-4*01   47   ..A.....TCC...A....C..........G..G....A...G...T.............G.............C.....GGG.......  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                       W  S  G  L  E  T  S  I  I  G  G  T  P  T  T  T  R  P  S  R  A  E  S  P  S  Q  W  T  R  P 
                    Query_11272  90   TGGAGTGGATTGGAGACATCTATTATAGGGGGAACACCAACTACAACCCGTCCCTCGAGAGCCGAGTCACCATCTCAGTGGACAAGACCA  179
V  86.0% (208/242)  IGHV4-4*01   137  .............G..A......C....T....G......................A....T...........A.....A......T...  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                       R  T  T  S  P  *  T  *  T  L  S  P  P  R  T  R  Q  Y  I  S  V  A  S  L  I  V  L  V  T  A 
                    Query_11272  180  AGAACCACTTCTCCCTGAACCTGAACTCTGTCACCGCCGCGGACACGGCAATATATTTCTGTTGCCTCGCTTATTGTGCTGGTGACTGCA  269
V  86.0% (208/242)  IGHV4-4*01   227  .......G...........G....G......G.................CG.G....G....----------------------------  288
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C                             
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------.......G..........-  22

                                      -IMGT----------------------->                                  
                                       S  A  I  K  R  P  T  L  T  T  G  A  R  E  P  R  S  P  S  P  Q 
                    Query_11272  270  TCCGCGATAAAACGGCCTACTTTGACTACTGGGGCCCGGGAGCCCCGGTCACCGTCTCCTCAG  332
J  93.6% (44/47)    IGHJ4*02     2    ----------------....................A....A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_324530

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         336     1e-94
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	N/A	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	N/A	N/A	TCACCTGCCAACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGATCACCTGCCAACCCCTACTACCACGCTCTGGACGTC	ARSPANPYYHALDV	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  V  Y  I  S  N  G  G  Y  S  W  T  *  I  R  Q  P  P  G  R  G 
                    Query_11273    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTACATCAGCAATGGTGGTTACTCCTGGACCTAGATCCGGCAGCCACCAGGGAGGGGC  90
V  93.2% (232/249)  IGHV4-30-2*01  49   ..................G............G..C........G.................G..G....................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Q  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  R  S 
                    Query_11273    91   CTGGAGTGGATTGGGTACATCTATCAAAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGCGTCACCATATCGGTAGACAGGTCC  180
V  93.2% (232/249)  IGHV4-30-2*01  139  ..........................T...............................A......A...........A............  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  V  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  A  N  P  Y  Y 
                    Query_11273    181  AAGAACCAGTTCTCCGTTAACTTGAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGATCACCTGCCAACCCCTACTAC  270
V  93.2% (232/249)  IGHV4-30-2*01  229  ...............C.G..GC....C..........................G...............---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  92.7% (51/55)    IGHJ6*02       8    -----------------------------------------------------------------------------------.......  14

                                        -------------->                                 
                                         H  A  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11273    271  CACGCTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  318
J  92.7% (51/55)    IGHJ6*02       15   T...G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_105125

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           392     2e-111
IGHD3-3*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GG	TTACGATTTTTGGAGTGGTT	TCAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTTACGATTTTTGGAGTGGTTTCAGACTTTGACTAC	ARVTIFGVVSDFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	269	18	0	93.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  T  Y  H 
                    Query_11274  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTACCTACCAC  91
V  93.7% (269/287)  IGHV1-18*04  7    ............................................................................C.......AG.T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  A  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  T  D  G  N  T  H  *  A  H 
                    Query_11274  92   GGTATCAACTGGGCGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTACCGATGGGAACACACACTAGGCACAC  181
V  93.7% (269/287)  IGHV1-18*04  97   .......G.....T.................................................TA.A....T......A....T.....G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  V  Q  G  R  V  T  L  T  T  D  S  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_11274  182  AACGTCCAGGGCAGAGTCACCTTGACCACAGACTCATCCACGAGCACCGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  93.7% (269/287)  IGHV1-18*04  187  ..GC.................A...........A.............A..........................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  V  T  I  F  G  V  V  S  D  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_11274  272  GTGTATTACTGTGCGAGGGTTACGATTTTTGGAGTGGTTTCAGACTTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  359
V  93.7% (269/287)  IGHV1-18*04  277  .................-----------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                          
D  100.0% (20/20)   IGHD3-3*01   4    -------------------....................-------------------------------------------------  23
J  97.8% (44/45)    IGHJ4*02     4    -------------------------------------------................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_324532

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           394     6e-112
IGHD5-18*01                                                                                           14.1    9.0   
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACAAGGGGATAA	CTATAGTTAC	GAATCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACAAGGGGATAACTATAGTTACGAATCT	AQGDNYSYES	281	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	166	21	19	2	0	90.5
FR3-IMGT	167	280	114	106	8	0	93
CDR3-IMGT (germline)	281	282	2	2	0	0	100
Total	N/A	N/A	282	267	15	0	94.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  W  N
                    Query_11275  1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTTGGAA  90
V  94.7% (267/282)  IGHV3-53*01  6    ..........G..........................................................................A.C..  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  A  G  G  S  T  Y  Y  A  D  S
                    Query_11275  91   CTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTCATTTATGCCGGTGGTAGCACATATTATGCAGACTC  180
V  94.7% (267/282)  IGHV3-53*01  96   ........G.............................................T......AG...............C..C........  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  S  S  K  K  V  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V
                    Query_11275  181  CGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGAAAGTGTTGTATCTTCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGT  270
V  94.7% (267/282)  IGHV3-53*01  186  ................................A.........CAC.C.............G.............................  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><----------CDR3-IMGT--------->                                  
                                        Y  Y  C  A  Q  G  D  N  Y  S  Y  E  S  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11275  271  GTATTACTGTGCACAAGGGGATAACTATAGTTACGAATCTTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  344
V  94.7% (267/282)  IGHV3-53*01  276  ............--------------------------------------------------------------  287
                                        Y  Y  C  A                                                              
D  90.0% (9/10)     IGHD5-18*01  11   ------------------------....G.....----------------------------------------  20
J  97.1% (33/34)    IGHJ4*02     15   ----------------------------------------.......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_105127

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           305     3e-85
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGCGGGGGGGG	ATTACTATGAGAATAGTGGTTATT	GGCTG	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGCGGCGGGGGGGGATTACTATGAGAATAGTGGTTATTGGCTGGACTTC	TRAAGGDYYENSGYWLDF	230	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	20	4	0	83.3
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	19	5	0	79.2
FR3-IMGT	116	229	114	110	4	0	96.5
CDR3-IMGT (germline)	230	236	7	6	1	0	85.7
Total	N/A	N/A	223	209	14	0	93.7


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  S  F  S  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  R  V 
                    Query_11276  14   TCTGGATTCAGTTTCAGTAGCTACACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTCGTGTT  103
V  93.7% (209/223)  IGHV3-21*01  73   ..........CC...........T.G..........................................................A..AG.  162
                                       S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       S  K  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  T  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 
                    Query_11276  104  AGTAAGTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCACGTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAAC  193
V  93.7% (209/223)  IGHV3-21*01  163  ....GT........................................TC..........................................  252
                                       S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><----------------------CDR3-IMGT--------------------->
                                       S  L  R  A  E  D  T  A  I  Y  Y  C  T  R  A  A  G  G  D  Y  Y  E  N  S  G  Y  W  L  D  F 
                    Query_11276  194  AGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTACGAGAGCGGCGGGGGGGGATTACTATGAGAATAGTGGTTATTGGCTGGACTTC  283
V  93.7% (209/223)  IGHV3-21*01  253  ........................G.G.........G......-----------------------------------------------  295
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  91.7% (22/24)    IGHD3-22*01  3    -------------------------------------------------------..........T.G...........-----------  26
J  97.5% (39/40)    IGHJ4*02     9    ------------------------------------------------------------------------------------....A.  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11276  284  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  317
J  97.5% (39/40)    IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_105120

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           355     3e-100
IGHD3-10*01                                                                                           12.2    32    
IGHJ3*02                                                                                              56.4    4e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCAGATCATTTTATCAGTTTC	TGGTTC	CCCTCGTGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCAGATCATTTTATCAGTTTCTGGTTCCCCTCGTGGTTTTGATATC	ASQIILSVSGSPRGFDI	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	239	114	107	4	3	93.9
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	247	239	5	3	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11277  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (239/247)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  N  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  A  R  D  N  A  
                    Query_11277  91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAATTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCGCCAGAGACAACGCCA  180
V  96.8% (239/247)  IGHV3-21*01  137  ..............................G...........................................T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M     S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  Q  I  I  L  S  V  S  
                    Query_11277  181  AGAACTCCCTATATCTGCAAATG---AGCCTGAGAGCCGAAGACACGGCTGTGTATTACTGTGCGAGCCAGATCATTTTATCAGTTTCTG  267
V  96.8% (239/247)  IGHV3-21*01  227  .......A..G............AAC..............G..........................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-10*01  10   ----------------------------------------------------------------------------------------..  11

                                      GT-------------------->                                  
                                      G  S  P  R  G  F  D  I  W  G  R  G  A  L  V  T  A  S  S  
                    Query_11277  268  GTTCCCCTCGTGGTTTTGATATCTGGGGCCGAGGGGCCCTGGTCACCGCCTCTTCAG  324
D  100.0% (6/6)     IGHD3-10*01  12   ....-----------------------------------------------------  15
J  88.6% (39/44)    IGHJ3*02     7    -------------.................A....A.AA.........T........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_105121

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           25.7    0.003
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGC	AGTAGTGGTTATT	GG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTCGACCCC	ARGGSSGYWWFDP	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	228	15	0	93.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_11278  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCATCAGTGGTTATTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.8% (228/243)  IGHV4-59*01  50   .....TCC...A....C.............G..........A....C.......G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  F  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  K  N  
                    Query_11278  94   GGATTGGGTTTATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGGGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  93.8% (228/243)  IGHV4-59*01  140  .........A.........C.................................A....................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  S  S  G  Y  W  W  F  
                    Query_11278  184  AGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTCG  273
V  93.8% (228/243)  IGHV4-59*01  230  ..............C...G.................................C..........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (13/13)   IGHD3-22*01  14   --------------------------------------------------------------------.............---------  26
J  93.5% (43/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  A  I  P  V  T  V  S  S  
                    Query_11278  274  ACCCCTGGGGCCAGGCAATCCCGGTCACCGTCTCCTCAG  312
J  93.5% (43/46)    IGHJ5*02     13   ...............G..C..T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_324536

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD2-21*01                                                                                           14.1    8.5   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATTCC	TCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTCCTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFLQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11279  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (239/248)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  Q  W  I  G  Y  I  Y  Y  S  G  S  T  S  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11279  91   CTGCAGTGGATTGGATACATCTATTACAGTGGGAGCACCTCCTACAGCCCGTCCCTCAAGAGTCGAGTTACCATATCAGTTGACACGTCT  180
V  96.4% (239/248)  IGHV4-31*03  139  ...G..........G.........................A.....A.................................A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  L  S  L  K  L  N  P  V  T  A  A  D  T  A  V  Y  F  C  A  R  S  S  L  F  L  Q  E 
                    Query_11279  181  AAGAACCAGCTCTCCCTGAAGCTGAACCCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGTCTTCTCTATTCCTCCAAGAA  270
V  96.4% (239/248)  IGHV4-31*03  229  .........T...............G.T..............................A.........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD2-21*01  22   ---------------------------------------------------------------------------.......--------  28

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11279  271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_324537

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            357     1e-100
IGHD3-10*01                                                                                           10.3    121   
IGHJ6*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TATATATCCTCTCTACCG	CGGGG	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATATATATATCCTCTCTACCGCGGGGGGTATGGACCTT	AKDIYILSTAGGMDL	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	252	10	10	0	0	100
Total	N/A	N/A	252	240	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  K  A  S  G  F  T  F  N  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11280  1    GGTCCCTGAGACTCTCCTGTAAAGCCTCTGGATTCACCTTTAATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  95.2% (240/252)  IGHV3-9*01   47   ....................GC...................G................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  T  W  N  S  G  S  M  G  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_11280  91   AGTGGGTCTCAGGTATTACTTGGAATAGTGGTAGTATGGGGTATGCGGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  95.2% (240/252)  IGHV3-9*01   137  ..................G...............C..A..C..............................A..................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  K  D  I  Y  I  L  S  T  
                    Query_11280  181  AGAACTCCCTGTATCTCCAAATGAACAGTCTGAGAGTTGAGGATACGGCCTTATATTACTGTGCAAAAGATATATATATCCTCTCTACCG  270
V  95.2% (240/252)  IGHV3-9*01   227  ................G...................C......C........G...................------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                      ---------------->                                 
                                      A  G  G  M  D  L  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_11280  271  CGGGGGGTATGGACCTTTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  320
D  100.0% (5/5)     IGHD3-10*01  15   .....---------------------------------------------  19
J  93.3% (42/45)    IGHJ6*02     18   -----.........G.C......................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_324538

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11281  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11281  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_11281  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11281  271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_105128

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           318     6e-89
IGHD5-12*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATTACATCGAGA	TGGCTAC	AATAGAGGAGTT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATTACATCGAGATGGCTACAATAGAGGAGTTTTTGCCTTC	ARELHRDGYNRGVFAF	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  R  T  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11282  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGGACCAATTACATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  91.1% (225/247)  IGHV3-53*01  47   ...........................................T.G...C........C..............................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      Q  W  V  S  L  I  H  S  G  G  T  T  S  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  K  S  T  
                    Query_11282  91   AGTGGGTCTCACTTATTCATAGTGGTGGGACCACGTCCTATTCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAAGTCCACTA  180
V  91.1% (225/247)  IGHV3-53*01  137  ...........G.....T....C.....T.G...A.A...CG........................................T....AG.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  V  Y  L  Q  M  V  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  L  H  R  D  G  Y  N  
                    Query_11282  181  ACACGGTATATCTTCAAATGGTCAACCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGAATTACATCGAGATGGCTACAATA  270
V  91.1% (225/247)  IGHV3-53*01  227  .....C.G............AA..G..........................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD5-12*01  11   -------------------------------------------------------------------------------.......----  17

                                      ---------------->                                  
                                      R  G  V  F  A  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11282  271  GAGGAGTTTTTGCCTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  321
J  93.0% (40/43)    IGHJ4*02     6    --------....A..A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_105129

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD2-21*01                                                                                           18.0    0.69  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	G	ATTGCGGTGGTG	TAGTGATGGAACTTGTTACTCTGGTTCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTAT	ARRLRWCSDGTCYSGSFEY	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	70	4	0	94.6
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	294	276	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  K  F  T  
                    Query_11283  4    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAAGTTTACCA  93
V  93.9% (276/294)  IGHV5-51*01  2    ....G.....G.......................A........G.....................................GC.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  F  P  R  D  S  D  T  R  Y  
                    Query_11283  94   GCTATTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTCGTGACTCCGATACCAGATATA  183
V  93.9% (276/294)  IGHV5-51*01  92   ....C......................T...........................G.......A....G.......T...........C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  Q  D  Q  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  D  S  L  K  A  S  D  
                    Query_11283  184  ACCCGTCCTTCCAAGACCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTACCTGCAGTGGGACAGCCTGAAGGCCTCGGACA  273
V  93.9% (276/294)  IGHV5-51*01  182  G..............G.......................A............................AG....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  M  Y  Y  C  A  R  R  L  R  W  C  S  D  G  T  C  Y  S  G  S  F  E  Y  W  G  Q  G  T  
                    Query_11283  274  CCGCCATGTATTACTGTGCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTATTGGGGCCAGGGAACCC  363
V  93.9% (276/294)  IGHV5-51*01  272  ........................------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  91.7% (11/12)    IGHD2-21*01  6    -------------------------....T.......-----------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------------------------.....C..C................  30

                                                        
                                      L  V  T  V  S  S  
                    Query_11283  364  TGGTCACCGTCTCCTCAG  381
J  95.3% (41/43)    IGHJ4*02     31   ..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_104295

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           14.1    9.0  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CTCTGTGACCAGGGCCTGGT	CGTTTGG	TCCCCCCCCACGACTCT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GAGAGACACTCTGTGACCAGGGCCTGGTCGTTTGGTCCCCCCCCACGACTCTACTTCTTTGACTCC	ERHSVTRAWSFGPPPRLYFFDS	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  T  T  Y  H  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_11284  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTACTACTTACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  94.0% (236/251)  IGHV4-39*01  49   ..............................................G..G....T..................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  S  Y  R  G  S  T  A  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S 
                    Query_11284  91   CTGGAGTGGATTGGGAGTATCTCTTATAGGGGGAGCACCGCCTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  94.0% (236/251)  IGHV4-39*01  139  ......................A......T.........TA.................A.....................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  P  D  T  A  V  Y  Y  C  E  R  H  S  V  T  R  A  W 
                    Query_11284  181  AAGAATCAATTCTCCCTGAAGCTGAGCTCTGTGACCGCCCCAGACACGGCTGTATATTACTGTGAGAGACACTCTGTGACCAGGGCCTGG  270
V  94.0% (236/251)  IGHV4-39*01  229  .....C..G..............................G.............G..........C......-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      --CDR3-IMGT--------------------------->                                  
                                       S  F  G  P  P  P  R  L  Y  F  F  D  S  W  G  Q  G  T  L  F  T  V  S  S  
                    Query_11284  271  TCGTTTGGTCCCCCCCCACGACTCTACTTCTTTGACTCCTGGGGCCAGGGAACCCTATTCACCGTCTCCTCAG  343
D  100.0% (7/7)     IGHD3-16*01  13   -.......-----------------------------------------------------------------  19
J  91.7% (44/48)    IGHJ4*02     1    -------------------------...A........A..................GG...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_347975

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           353     1e-99
IGHD3-22*01                                                                                           18.0    0.67 
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCCCCCCGACAC	AGTGGTTAT	GG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCCCCCGACACAGTGGTTATGGTACGGTATGGACGTC	ARHPPPTQWLWYGMDV	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	69	2	0	97.2
CDR1-IMGT	79	102	24	15	9	0	62.5
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	98	16	0	86
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	290	258	32	0	89


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  R  A  S  G  Y  S  F  G  D  
                    Query_11285  8    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAGGGCATCTGGATACAGCTTCGGTGATT  97
V  89.0% (258/290)  IGHV1-46*01  5    ...................G...........................................A..............C....ACCAGC.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  Y  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  G  T  T  Y  A  
                    Query_11285  98   ATTACGTGCACTGGGTGCGACAGGCCCCAGGACAAGGGCTGGAGTGGATGGGAATAATCAACCCTAGTGGTGGCGGCACAACCTACGCTC  187
V  89.0% (258/290)  IGHV1-46*01  95   .C..TA......................T...........T................................TA......G......A.  184
                                      Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  R  F  Q  G  R  L  T  V  T  R  D  T  S  T  K  T  V  Y  M  D  L  T  S  L  R  S  E  D  T  
                    Query_11285  188  AGAGATTTCAGGGCAGACTCACCGTGACCAGAGACACGTCCACAAAGACAGTCTACATGGACCTGACCAGCCTGAGATCTGAGGACACGG  277
V  89.0% (258/290)  IGHV1-46*01  185  ...AG..C.........G.....A.......G...........G.GC..............G....G.......................  274
                                      Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-------------------CDR3-IMGT------------------>                            
                                      A  V  Y  Y  C  A  R  H  P  P  P  T  Q  W  L  W  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_11285  278  CCGTCTACTATTGTGCGAGACATCCCCCCCCGACACAGTGGTTATGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCT  367
V  89.0% (258/290)  IGHV1-46*01  275  ....G..T..C.........----------------------------------------------------------------------  294
                                      A  V  Y  Y  C  A  R                                                                       
D  100.0% (9/9)     IGHD3-22*01  17   ------------------------------------.........---------------------------------------------  25
J  100.0% (48/48)   IGHJ6*02     15   -----------------------------------------------...........................................  57

                                           
                                      S  S 
                    Query_11285  368  CCTCA  372
J  100.0% (48/48)   IGHJ6*02     58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_347974

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           400     9e-114
IGHD6-6*01                                                                                            10.3    131   
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	AACG	TCGTC	TTTCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAAACGTCGTCTTTCAACTACTTCAACTACGGTATGGACGTC	ARETSSFNYFNYGMDV	265	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	51	51	51	0	0	100
CDR1-IMGT	52	75	24	23	1	0	95.8
FR2-IMGT	76	126	51	51	0	0	100
CDR2-IMGT	127	150	24	21	3	0	87.5
FR3-IMGT	151	264	114	111	3	0	97.4
CDR3-IMGT (germline)	265	272	8	7	1	0	87.5
Total	N/A	N/A	272	264	8	0	97.1


Alignments

                                      <--------------------FR1-IMGT---------------------><-------CDR1-IMGT------><--------------
                                       A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y  Y  M  H  W  V  R 
                    Query_11286  1    GCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGTTACTATATGCACTGGGTGCGA  90
V  97.1% (264/272)  IGHV1-46*01  25   ....................................................................C.....................  114
                                       A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y  Y  M  H  W  V  R 

                                      ------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------------------------
                                       Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  D  G  D  T  T  Y  A  Q  K  F  Q  G  R  V 
                    Query_11286  91   CAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGATGGTGACACAACCTACGCACAGAAGTTCCAGGGCAGAGTC  180
V  97.1% (264/272)  IGHV1-46*01  115  .................................................G....AG.....G............................  204
                                       Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q  K  F  Q  G  R  V 

                                      -----------------------FR3-IMGT----------------------------------------------------><-----
                                       T  M  T  R  D  T  S  T  S  T  L  Y  M  E  L  S  S  L  R  S  E  D  T  A  V  Y  Y  C  A  R 
                    Query_11286  181  ACCATGACCAGGGACACGTCCACGAGCACACTCTACATGGAGCTTAGCAGCCTGAGATCTGAGGACACGGCCGTGTATTACTGTGCGAGG  270
V  97.1% (264/272)  IGHV1-46*01  205  ..............................G.............G............................................A  294
                                       T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A  V  Y  Y  C  A  R 

                                      --------------CDR3-IMGT------------------>                                 
                                       E  T  S  S  F  N  Y  F  N  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11286  271  GAAACGTCGTCTTTCAACTACTTCAACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  345
V  97.1% (264/272)  IGHV1-46*01  295  ..-------------------------------------------------------------------------  296
                                                                                                                 
D  100.0% (5/5)     IGHD6-6*01   13   ------.....----------------------------------------------------------------  17
J  96.6% (57/59)    IGHJ6*02     4    ----------------......A.T..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_347973

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD6-19*01                                                                                           21.8    0.041
IGHJ5*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTCCCGC	GTATAGTAGTGGCT	ACGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTCCCGCGTATAGTAGTGGCTACGGCTGGTTCGGCTCC	ARDSPAYSSGYGWFGS	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  N  T  Y  Y  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_11287  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAATACTTACTACTGGAGTTGGATCCGGCAGACCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   ......................................C.G..G............C............C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_11287  91   TGGATTGGTTATATCTATTACACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G.............G.....G...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  T  L  R  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  D  S  P  A  Y  S  S  G  Y 
                    Query_11287  181  CAGTTCTCCCTGACGCTGAGGTCTGTGAGCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGATTCTCCCGCGTATAGTAGTGGCTAC  270
V  94.3% (231/245)  IGHV4-59*01  229  .............A......C.......C..................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  3    --------------------------------------------------------------------------......C.......--  16

                                      -------------->                                  
                                       G  W  F  G  S  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_11287  271  GGCTGGTTCGGCTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  319
J  93.6% (44/47)    IGHJ5*01     5    --........A............A.....................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_347971

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           299     2e-83
IGHD2-21*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCGGCCC	GGTGGTG	CTATCGCCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCGGCCCGGTGGTGCTATCGCCGTTTGACTAC	AKVGPVVLSPFDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	10	1	0	90.9
CDR1-IMGT	25	48	24	23	1	0	95.8
FR2-IMGT	49	99	51	47	4	0	92.2
CDR2-IMGT	100	123	24	19	5	0	79.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	231	211	20	0	91.3


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  S  N  Y  A  M  A  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I  
                    Query_11288  14   GTACAGCCTCTGGATTCACCTTTAGCAACTATGCCATGGCCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGGAGTGGGTCTCAACTATCA  103
V  91.3% (211/231)  IGHV3-23*01  65   ..G........................G..........AG...........................G...............G....T.  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      T  N  S  G  A  S  T  D  Y  A  D  S  A  K  G  R  F  T  M  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_11288  104  CTAATAGTGGTGCTAGCACAGACTACGCAGACTCCGCGAAGGGCCGCTTCACCATGTCCAGAGACAATTCCAAGAACACCCTGTATCTCC  193
V  91.3% (211/231)  IGHV3-23*01  155  G.GG........G.......T...............T.........G........C.......................G........G.  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------CDR3-IMGT-------------->       
                                      Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  V  G  P  V  V  L  S  P  F  D  Y  W  G  
                    Query_11288  194  AAATGAACAGCCTGCGAGTCGAGGACACGGCCGTATACTACTGTGCGAAAGTCGGCCCGGTGGTGCTATCGCCGTTTGACTACTGGGGCC  283
V  91.3% (211/231)  IGHV3-23*01  245  ..............A...C..................T.............---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (7/7)     IGHD2-21*01  11   ----------------------------------------------------------.......-------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------------------------------------------------------------------................  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_11288  284  AGGGCACCCTGGTCACCGTCTCCTCAG  310
J  97.7% (42/43)    IGHJ4*02     22   ....A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_104292

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           311     4e-87
IGHD1-26*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCG	TAGAGGGAGC	AACAGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCGTAGAGGGAGCAACAGTTTTTGACTAC	AKVVEGATVFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	224	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11289  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGGCAGTTATGCCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.0% (224/249)  IGHV3-23*01  47   .........................................A....C..........GC..........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  S  N  K  G  R  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11289  91   AGTGGGTGGCGGGTATCAGTAACAAAGGTCGGAACACATATTACGCAGACTCCGTGAAGGGCCGGTTCACCATTTCCAGAGACAATTCCG  180
V  90.0% (224/249)  IGHV3-23*01  137  .......CT.A.C...T...GGT.GT...G.T.G......C................................C...............A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      E  K  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  V  V  E  G  A  T  V  
                    Query_11289  181  AGAAGACGCTATATCTCCAAATGAACAGTCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTCGTAGAGGGAGCAACAGTTT  270
V  90.0% (224/249)  IGHV3-23*01  227  ....C.....G.....G...........C........................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (9/10)     IGHD1-26*01  5    ------------------------------------------------------------------------...T......--------  14
J  97.7% (42/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_11289  271  TTGACTACTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  312
J  97.7% (42/43)    IGHJ4*02     7    .............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_302496

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           327     8e-92
IGHD1-26*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	TGTGGC	TGGGAGCTA	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATGTGGCTGGGAGCTATGACTAC	ANVAGSYDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	228	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  G  Y  G  M  H  W  V  R  Q  A  P  D  K  G  P  
                    Query_11290  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTCAGTGGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGACAAGGGGCCGG  90
V  92.3% (228/247)  IGHV3-30*18  47   .....................C......................A.................................G........T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  Y  I  S  Y  D  G  S  Q  K  Y  Y  E  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_11290  91   AGTGGGTGGCATATATATCATATGATGGAAGTCAAAAATATTATGAAGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAGACAACAGCA  180
V  92.3% (228/247)  IGHV3-30*18  137  ...........GT...................A.T.....C....C.......................C...............TTC..  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  T  L  Y  L  Q  M  N  S  L  K  T  D  D  T  A  V  Y  F  C  A  N  V  A  G  S  Y  D  Y  
                    Query_11290  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAAAACTGACGACACGGCTGTGTATTTTTGTGCGAATGTGGCTGGGAGCTATGACTACT  270
V  92.3% (228/247)  IGHV3-30*18  227  .................................G.G....G................AC........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD1-26*01  8    -------------------------------------------------------------------------.........--------  16
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11290  271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (41/41)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_81543

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            346     2e-97
IGHD6-6*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGTCGA	ATACCAGCTCGTCC	ACGAGGAAAGTCGG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGTCGAATACCAGCTCGTCCACGAGGAAAGTCGGACTTTGACTAC	ARSRIPARPRGKSDFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  G  V  S  G  G  S  I  S  S  D  N  W  W  G  W  V  R  Q  P  P  G  K  G  L 
                    Query_11291  1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGTGGCTCCATCAGCAGTGATAACTGGTGGGGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.1% (233/245)  IGHV4-4*02   49   ...................C.........................AG..........A................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  T  G  S  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_11291  91   GAGTGGATTGGGGAGATCTATCATACTGGGAGCACCAGCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTCGACAAGTCCAAG  180
V  95.1% (233/245)  IGHV4-4*02   139  ..............A..........G...........A.......................................A............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  N  L  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  S  R  I  P  A  R  P  R 
                    Query_11291  181  AACCAGTTCTCCCTGAACCTGACGTCTGTGACCGCCGCGGACACGGCCATGTATTACTGTGCGAGGAGTCGAATACCAGCTCGTCCACGA  270
V  95.1% (233/245)  IGHV4-4*02   229  .................G....GC........................G................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  92.9% (13/14)    IGHD6-6*01   5    ------------------------------------------------------------------------...G..........----  18

                                      -------------------->                                  
                                       G  K  S  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11291  271  GGAAAGTCGGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (45/45)   IGHJ4*02     4    ----------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_104299

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           288     4e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACTTTGACTTC	ARVSTSAYYFDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	214	30	0	87.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_11292  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGACAACCCCCAGGAAAGGGACTGGAG  90
V  87.7% (214/244)  IGHV4-59*01  49   .................................T........A.....T.C.........A....G..G........G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  S  F  D  T  S  K  R 
                    Query_11292  91   TGGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGTCCTTTGACACGTCCAAGAGG  180
V  87.7% (214/244)  IGHV4-59*01  139  .......GGT....C...........G.G..C...C................A..G............A..AG.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  Y  Y  F  D 
                    Query_11292  181  CAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATACTACTTTGAC  270
V  87.7% (214/244)  IGHV4-59*01  229  .............A....AGC..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-2*01   17   ---------------------------------------------------------------------......---------------  22
J  91.3% (42/46)    IGHJ4*02     1    -------------------------------------------------------------------------------...........  11

                                      -->                                
                                       F  W  G  R  G  T  L  V  V  V  S  S
                    Query_11292  271  TTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  305
J  91.3% (42/46)    IGHJ4*02     12   .A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_104298

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         357     1e-100
IGHD5-18*01                                                                                           14.1    8.6   
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GAAG	ACAGATATGG	GGGACTTTGGACCTGCAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAAGACAGATATGGGGGACTTTGGACCTGCATTACTTTGACTTC	ARGRQIWGTLDLHYFDF	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_11293    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  95.6% (239/250)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  F  Y  N  T  E  T  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  D  R  S 
                    Query_11293    91   CTGGAGTGGATTGGATACTTCTATAATACTGAGACCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCACTAGACAGGTCC  180
V  95.6% (239/250)  IGHV4-30-2*01  139  ..............G...A.....C...G..G..G.......................A...................G...........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         R  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  Q  I  W  G  T 
                    Query_11293    181  AGGAACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAAGACAGATATGGGGGACT  270
V  95.6% (239/250)  IGHV4-30-2*01  229  .A.................A......C...........................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD5-18*01    7    --------------------------------------------------------------------------....C.....------  16

                                        MGT-------------------->                                  
                                         L  D  L  H  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11293    271  TTGGACCTGCATTACTTTGACTTCTGGGGCCAGGGCACCCTCGTCACCGTCTCCTCAG  328
J  93.5% (43/46)    IGHJ4*02       3    ------------..........A............A.....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_347979

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           361     4e-102
IGHD6-13*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	GCAGCAGATGG	AC	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCAGCAGATGGACTACGACTACTACTACGGTTTTGACGTC	ARGQQMDYDYYYGFDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  G  M  H  W  A  R  Q  A  P  G  K  G  L  
                    Query_11294  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAATACCTATGGCATGCACTGGGCCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-33*01  47   ..........................................G..G.................T..........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  N  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11294  91   AGTGGGTGGCAGTCATATGGTATGATGGAAGTAATAAATACAATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.4% (240/249)  IGHV3-33*01  137  .............T...........................T...C............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  K  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  Q  Q  M  D  Y  D  
                    Query_11294  181  AGAACACACTGTATCTGCAAATGAAGAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGCAGCAGATGGACTACGACT  270
V  96.4% (240/249)  IGHV3-33*01  227  .......G.................C..........C................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD6-13*01  8    ----------------------------------------------------------------------.......C...---------  18
J  93.3% (56/60)    IGHJ6*02     3    -----------------------------------------------------------------------------------...T...  9

                                      T------------------>                                 
                                      Y  Y  Y  G  F  D  V  W  G  Q  G  P  T  V  T  V  S  S 
                    Query_11294  271  ACTACTACGGTTTTGACGTCTGGGGCCAAGGGCCCACGGTCACCGTCTCCTCA  323
J  93.3% (56/60)    IGHJ6*02     10   ...........A.G..................A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_347978

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD6-13*01                                                                                           21.8    0.039 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGAG	AGCAGCAGCTG	AA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGAGCAGCAGCTGAATGACTAC	ARDREQQLNDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11295  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  V  S  S  I  S  S  S  S  S  Y  M  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_11295  91   AGTGCGTCTCATCCATTAGTAGTAGCAGTAGTTACATGTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACGACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  ....G....................T...........A.............................................A......  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  E  Q  Q  L  N  
                    Query_11295  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGAGAGCAGCAGCTGAATG  270
V  98.4% (246/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  7    ---------------------------------------------------------------------------...........----  17
J  95.1% (39/41)    IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_11295  271  ACTACTGGGGCCAGGGAACCCTCGTCACCGTCTCCCCAG  309
J  95.1% (39/41)    IGHJ4*02     10   ......................G............T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_152318

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD1-26*01                                                                                           14.1    9.5   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGG	TAGTGGG	CAATACAGTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCT	ARGGSGQYSAYFGS	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	70	4	0	94.6
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	106	8	0	93
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	274	19	0	93.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  I  
                    Query_11296  2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCATCTGGATACAGCTTTATCA  91
V  93.5% (274/293)  IGHV5-51*01  2    .................................A....................A..............GT................C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  D  W  I  G  W  V  R  Q  K  P  G  K  G  L  D  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  
                    Query_11296  92   GCGACTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGACTGGATGGGGGTCATTTATCCTGGTGACTCTGAAACCAGATATA  181
V  93.5% (274/293)  IGHV5-51*01  92   ..T........................T..................G.........A....C.................T........C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  T  S  L  K  A  S  D  
                    Query_11296  182  GTCCGTCCTTCCAAGGCCAGGTCACCATTTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGACCAGCCTGAAGGCCTCGGACA  271
V  93.5% (274/293)  IGHV5-51*01  182  .C..........................C...................G....................G....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  I  Y  F  C  A  R  G  G  S  G  Q  Y  S  A  Y  F  G  S  W  G  Q  G  T  L  V  T  V  S  
                    Query_11296  272  CCGCCATATACTTCTGTGCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  361
V  93.5% (274/293)  IGHV5-51*01  272  .......G..T.A..........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD1-26*01  5    ----------------------------.......-------------------------------------------------------  11
J  93.6% (44/47)    IGHJ4*02     2    ----------------------------------------------........A..AC...............................  45

                                         
                                      S  
                    Query_11296  362  CAG  364
J  93.6% (44/47)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_292545

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           296     2e-82
IGHD3-10*01                                                                                           10.3    113  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	230	265	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	20	4	0	83.3
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	236	7	7	0	0	100
Total	N/A	N/A	223	206	17	0	92.4


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  E  W  V  S  S  I  S  S  T 
                    Query_11297  14   TCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTACT  103
V  92.4% (206/223)  IGHV3-21*01  73   ..................AG.....G....A..............G..........................................G.  162
                                       S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       S  E  Y  I  Y  Y  P  D  S  V  K  G  R  F  T  V  P  R  D  N  A  K  N  S  L  F  L  Q  M  N 
                    Query_11297  104  AGTGAATACATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCCCCAGGGACAACGCCAAGAACTCACTGTTTCTGCAGATGAAC  193
V  92.4% (206/223)  IGHV3-21*01  163  ...AGT........C...G..........................A..T....A......................A......A......  252
                                       S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><-------------CDR3-IMGT------------>                  
                                       S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  F  D  L  W  G  Q  G  T  M 
                    Query_11297  194  AGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTCTGGGGCCAGGGGACAATG  283
V  92.4% (206/223)  IGHV3-21*01  253  ........................G..................-----------------------------------------------  295
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  100.0% (5/5)     IGHD3-10*01  14   ------------------------------------------------.....-------------------------------------  18
J  96.0% (48/50)    IGHJ3*01     1    --------------------------------------------------------.............G..........A.........  34

                                                      
                                       V  T  V  S  S  
                    Query_11297  284  GTCACCGTCTCTTCAG  299
J  96.0% (48/50)    IGHJ3*01     35   ................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_333821

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           332     3e-93
IGHD5-12*01                                                                                           35.3    4e-06
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGCAAAGCAAGGAA	GGATATAGTGGCTACGAT	CC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGCAAAGCAAGGAAGGATATAGTGGCTACGATCCCTACTACGGTATGGACGTC	ARVQSKEGYSGYDPYYGMDV	230	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	113	1	0	99.1
CDR3-IMGT (germline)	230	236	7	7	0	0	100
Total	N/A	N/A	224	218	6	0	97.3


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  S  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  W  Y  D
                    Query_11298  13   GTCTGGATTCAGCTTCAGTACTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGTCAGTTATATGGTATGA  102
V  97.3% (218/224)  IGHV3-33*01  72   ...........C........GC...................................................G................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  N  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_11298  103  TGGAAGTAATAATTATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAA  192
V  97.3% (218/224)  IGHV3-33*01  162  ............A..C..........................................................................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-------------------------CDR3-IMGT------------------
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  Q  S  K  E  G  Y  S  G  Y  D  P  Y  Y  G  M
                    Query_11298  193  CAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGTGCAAAGCAAGGAAGGATATAGTGGCTACGATCCCTACTACGGTAT  282
V  97.3% (218/224)  IGHV3-33*01  252  ............................................----------------------------------------------  295
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (18/18)   IGHD5-12*01  3    ----------------------------------------------------------..................--------------  20
J  100.0% (52/52)   IGHJ6*02     11   ------------------------------------------------------------------------------............  22

                                      ------>                                 
                                        D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11298  283  GGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  322
J  100.0% (52/52)   IGHJ6*02     23   ........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_2036

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11299  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01   49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_11299  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01   139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_11299  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01   229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01   13   ----------------------------------------------------------------------.....C..G...--------  24

                                      ----------->                                  
                                       G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_11299  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_197215

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           305     3e-85
IGHD3-10*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	CCCCTGACGTT	TTACTATACTTCGGGGAG	CCTATCCTAGGTCG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGCCCCTGACGTTTTACTATACTTCGGGGAGCCTATCCTAGGTCGTGCTCTTGATATC	AKAPDVLLYFGEPILGRALDI	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	222	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  D  S  E  V  T  F  T  T  C  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11300  1    GGTCCCTGAGACTCTCCTGTACAGACTCTGAAGTCACCTTTACCACCTGTGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.2% (222/249)  IGHV3-23*01  47   ....................G...C.....G.T.........G..G..A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  A  S  G  A  N  T  Y  Y  A  D  S  A  K  G  R  F  T  L  S  R  D  N  S  
                    Query_11300  91   AGTGGGTCGCGTCTATTTCTGCGAGTGGTGCTAACACATACTACGCAGACTCCGCGAAGGGCCGGTTCACCCTCTCCAGAGACAATTCCC  180
V  89.2% (222/249)  IGHV3-23*01  137  ........T.AG.....AG..GT.......G..G....................T................A.................A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      Q  N  T  L  L  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  P  D  V  L  L  Y  
                    Query_11300  181  AGAACACACTACTTCTGCAGATGGACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCAAAAGCCCCTGACGTTTTACTATACT  270
V  89.2% (222/249)  IGHV3-23*01  227  .......G..GTA......A...A........................................G....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.9% (16/18)    IGHD3-10*01  4    --------------------------------------------------------------------------------.......GG.  13

                                      DR3-IMGT-------------------------->                                  
                                      F  G  E  P  I  L  G  R  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11300  271  TCGGGGAGCCTATCCTAGGTCGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  339
D  88.9% (16/18)    IGHD3-10*01  14   ........-------------------------------------------------------------  21
J  97.9% (46/47)    IGHJ3*02     4    ----------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_197214

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           355     3e-100
IGHD3-10*01                                                                                           52.6    2e-11 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAATAAGTGGCTCAG	ATTACTATGGTTCGGGGAGTTATTATA	TTCGACCCTCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAATAAGTGGCTCAGATTACTATGGTTCGGGGAGTTATTATATTCGACCCTCATACTACTTTGACTCC	AKISGSDYYGSGSYYIRPSYYFDS	244	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	247	4	4	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_11301  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAATAGTTATTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.0% (237/247)  IGHV4-39*01  49   ..............................................G......C....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  T  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  T  S 
                    Query_11301  91   CTGGAGTGGATTGCGAGTACCTATTATAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCTGTAGACACGTCC  180
V  96.0% (237/247)  IGHV4-39*01  139  .............G.....T..............G...................................C......C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  G  V  Y  H  C  A  K  I  S  G  S  D  Y  Y 
                    Query_11301  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGGTGTCTATCACTGTGCGAAAATAAGTGGCTCAGATTACTAT  270
V  96.0% (237/247)  IGHV4-39*01  229  .................................................C...G...T.........-----------------------  295
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (27/27)   IGHD3-10*01  3    ----------------------------------------------------------------------------------........  10

                                      -----CDR3-IMGT------------------------------>                                  
                                       G  S  G  S  Y  Y  I  R  P  S  Y  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11301  271  GGTTCGGGGAGTTATTATATTCGACCCTCATACTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  349
D  100.0% (27/27)   IGHD3-10*01  11   ...................------------------------------------------------------------  29
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------............A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_153018

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            366     2e-103
IGHD3-3*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGTAGTCAAG	ACGATTTTTGGAGTGGTT	TGTTCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTAGTCAAGACGATTTTTGGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTC	ARDGSQDDFWSGLFHYYYGMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  P  P  G  K  G  L  
                    Query_11302  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGGTATTGGATGAGTTGGGTCCGCCAACCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-7*03   47   ..............................................C...........C...........GG..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_11302  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (242/250)  IGHV3-7*03   137  ........................................................A.................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  V  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  Q  D  D  F  
                    Query_11302  181  AGAACTCAGTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAGAGATGGTAGTCAAGACGATTTTT  270
V  96.8% (242/250)  IGHV3-7*03   227  ........C........C..................................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-3*01   6    ---------------------------------------------------------------------------------.........  14

                                      -CDR3-IMGT--------------------------->                                 
                                      W  S  G  L  F  H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11302  271  GGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  100.0% (18/18)   IGHD3-3*01   15   .........--------------------------------------------------------------  23
J  96.4% (54/56)    IGHJ6*02     7    ---------------.......C..C.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_197211

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD3-16*01                                                                                           43.0    2e-08 
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCTAGTCTGGAA	TATGATTACGTTTGGGGGAGTT	CTCACCTCAC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCTAGTCTGGAATATGATTACGTTTGGGGGAGTTCTCACCTCACCTGGTTCGACCCC	AREASLEYDYVWGSSHLTWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  S  I  S  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11303  1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCTCCATCAGTAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*01  49   ...................C.........................T............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  T  G  S  T  K  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11303  91   TGGATTGGGTATATGTATTACACTGGGAGCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAT  180
V  96.3% (236/245)  IGHV4-59*01  139  ..............C.......G............C................A....................................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  E  A  S  L  E  Y  D  Y  V 
                    Query_11303  181  CAGTTCTCCCTGAAGTTGAGCTCTGTGAGCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAAGCTAGTCTGGAATATGATTACGTT  270
V  96.3% (236/245)  IGHV4-59*01  229  ...............C............C....................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (22/22)   IGHD3-16*01  5    ------------------------------------------------------------------------------............  16

                                      -IMGT--------------------------->                                  
                                       W  G  S  S  H  L  T  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11303  271  TGGGGGAGTTCTCACCTCACCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  337
D  100.0% (22/22)   IGHD3-16*01  17   ..........---------------------------------------------------------  26
J  100.0% (47/47)   IGHJ5*02     5    --------------------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_197210

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            405     3e-115
IGHD3-16*01                                                                                           12.2    34    
IGHJ3*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GCTTCC	TGGGGG	CCATGAGA	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATC	ARGFLGAMRDGLDI	273	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	109	5	0	95.6
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	269	10	0	96.4


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  D  T  W  N  W  
                    Query_11304  1    CAGGACTGGTGAAGCCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGATACTTGGAACTGGA  90
V  96.4% (269/279)  IGHV6-1*01   26   .................T.G.......................................................C.G............  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_11304  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGGAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  96.4% (269/279)  IGHV6-1*01   116  .....................................A....................................................  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  S  S  K  N  Q  F  S  L  Q  L  N  S  V  T  F  E  D  T  A  V  Y  F  
                    Query_11304  181  GTCGAATAACCATTAACCCAGACTCATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTTTCGAGGACACGGCTGTGTATTTCT  270
V  96.4% (269/279)  IGHV6-1*01   206  .............C.........A.........................................CC....................A..  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------------CDR3-IMGT--------------->                                  
                                      C  A  R  G  F  L  G  A  M  R  D  G  L  D  I  W  R  Q  G  T  M  V  T  V  S  S  
                    Query_11304  271  GTGCAAGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATCTGGCGCCAAGGGACAATGGTCACCGTCTCTTCAG  348
V  96.4% (269/279)  IGHV6-1*01   296  .........---------------------------------------------------------------------  304
                                      C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  17   ---------------......---------------------------------------------------------  22
J  93.9% (46/49)    IGHJ3*02     2    -----------------------------....C...T.........G..............................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_197213

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           363     1e-102
IGHD3-9*01                                                                                            29.5    2e-04 
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTCGGGATG	GATATTTTGACTGGT	GTCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTCGGGATGGATATTTTGACTGGTGTCTTCTACTACTACTTCGATCTC	ARVGMDILTGVFYYYFDL	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	113	1	0	99.1
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	244	238	6	0	97.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  H  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11305  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCCACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.5% (238/244)  IGHV3-53*01  47   ...............................................A..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  A  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_11305  91   AGTGGGTCTCGGTCATTTATGCCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  97.5% (238/244)  IGHV3-53*01  137  ..........A..T......AG....................................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------------CDR3-IMG
                                      N  T  L  Y  F  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  M  D  I  L  T  G  
                    Query_11305  181  ACACGCTGTATTTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGGGTCGGGATGGATATTTTGACTGGTG  270
V  97.5% (238/244)  IGHV3-53*01  227  ...........C....................................................--------------------------  290
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  100.0% (15/15)   IGHD3-9*01   8    --------------------------------------------------------------------------...............-  22

                                      T--------------------->                                  
                                      V  F  Y  Y  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11305  271  TCTTCTACTACTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  327
J  96.2% (51/53)    IGHJ2*01     1    ----.....GG..............................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_153013

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD3-22*01                                                                                           18.0    0.61 
IGHJ2*01                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTCAAACATT	TGATAGTGGTGCTTA	CGAGTTCCAGGACCCT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTCAAACATTTGATAGTGGTGCTTACGAGTTCCAGGACCCTTACTGGTACTTCGATCTC	AKVQTFDSGAYEFQDPYWYFDL	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	21	3	0	87.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	231	221	10	0	95.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  R  I  Y  D  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  
                    Query_11306  14   GTGCAGCCTCTGGATTCACCTTTAGAATCTATGACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATCA  103
V  95.7% (221/231)  IGHV3-23*01  65   .........................C.G.....C......................................................T.  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  G  T  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_11306  104  GTGGGAGTGGTGGTACCACATATTACACAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTAC  193
V  95.7% (221/231)  IGHV3-23*01  155  ....T..........G......C...G.............................................................G.  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><----------------------------CDR3-IMGT--------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  V  Q  T  F  D  S  G  A  Y  E  F  Q  D  
                    Query_11306  194  AGATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGTTCAAACATTTGATAGTGGTGCTTACGAGTTCCAGGACC  283
V  95.7% (221/231)  IGHV3-23*01  245  .A.................................................---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  86.7% (13/15)    IGHD3-22*01  10   -------------------------------------------------------------.......A...G...--------------  24

                                      ------------------->                                  
                                      P  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  F  S  S  
                    Query_11306  284  CTTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTTTCTCCTCAG  337
J  98.1% (51/52)    IGHJ2*01     2    --..........................................G.........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_153012

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           286     1e-79
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	CAAGGAAGCCGACCCAACCAC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGCAAGGAAGCCGACCCAACCACACTACTTTGACTCC	TRARKPTQPHYFDS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	216	33	0	86.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  F  G  F  S  F  S  S  Y  G  I  R  W  V  R  Q  A  P  G  K  G  L  
                    Query_11307  1    GGTCCCTGAGACTCTCCTGTGCAGGCTTTGGATTCAGTTTCAGTTCGTATGGCATACGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  86.7% (216/249)  IGHV3-64*01  47   ........................C..C........CC......AGC....CT..G.A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  A  G  I  S  T  D  G  S  K  T  S  Y  V  N  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11307  91   AATATGTTGCAGGTATTAGTACTGATGGTTCTAAGACATCTTATGTGAACTCTGTGAAGGGTAGATTCACCATCTCTAGAGACAATTCCA  180
V  86.7% (216/249)  IGHV3-64*01  137  ........T...C........G.A....GGG..GC....A.....CA..............C..............C.............  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  S  T  V  F  L  Q  M  G  S  L  R  G  E  D  M  A  V  Y  Y  C  T  R  A  R  K  P  T  Q  P  
                    Query_11307  181  GGAGTACGGTGTTTCTTCAAATGGGCAGCCTGAGAGGTGAGGACATGGCCGTGTATTACTGTACGAGAGCAAGGAAGCCGACCCAACCAC  270
V  86.7% (216/249)  IGHV3-64*01  227  A..AC...C...A.......................C............T............G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       

                                      ------------->                                  
                                      H  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11307  271  ACTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.9% (47/48)    IGHJ4*02     1    ............A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_153011

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           297     7e-83
IGHD3-22*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGGGGGG	TTACTAC	GCATC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGGGGTTACTACGCATCCTACTTTGACTAC	ARMGGYYASYFDY	232	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	11	0	0	100
CDR1-IMGT	19	42	24	23	1	0	95.8
FR2-IMGT	43	93	51	48	3	0	94.1
CDR2-IMGT	94	117	24	17	7	0	70.8
FR3-IMGT	118	231	114	105	9	0	92.1
CDR3-IMGT (germline)	232	237	6	6	0	0	100
Total	N/A	N/A	230	210	20	0	91.3


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  Y  I  S  Y  I  
                    Query_11308  8    GTGCAGCCTCTGGATTCACCTTCAGTAGTTACGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTATATTTCATACATTA  97
V  91.3% (210/230)  IGHV3-48*03  65   ...............................T...........................................GGG............  154
                                         A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  S  D  M  R  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  G  K  N  W  L  Y  L  
                    Query_11308  98   GCGGGAGTGGCAGTGACATGAGGTACGCAGACTCTGTGAAGGGCCGATTCATCATCTCCAGAGACAACGGCAAGAACTGGCTGTATCTGC  187
V  91.3% (210/230)  IGHV3-48*03  155  .TA.T.....T...AC...ATAC............................C.................C........CA..........  244
                                      S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><--------------CDR3-IMGT-------------->       
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  M  G  G  Y  Y  A  S  Y  F  D  Y  W  G  
                    Query_11308  188  AAATGAACAGCCTGAGAGCCGAAGACACGGCTGTGTATTACTGTGCGAGAATGGGGGGTTACTACGCATCCTACTTTGACTACTGGGGCC  277
V  91.3% (210/230)  IGHV3-48*03  245  ......................G...........T...............----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (7/7)     IGHD3-22*01  25   ----------------------------------------------------------.......-------------------------  31
J  100.0% (45/45)   IGHJ4*02     2    ----------------------------------------------------------------------....................  21

                                                               
                                      Q  G  T  L  V  T  V  S  S
                    Query_11308  278  AGGGAACCCTGGTCACCGTCTCCTC  302
J  100.0% (45/45)   IGHJ4*02     22   .........................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_153010

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           338     5e-95
IGHD6-13*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTGG	GCACCAGCTGG	GCCGGG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTGGGCACCAGCTGGGCCGGGTGACTCC	ARHWAPAGPGDS	267	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	80	30	27	3	0	90
FR2-IMGT	81	131	51	49	2	0	96.1
CDR2-IMGT	132	152	21	16	5	0	76.2
FR3-IMGT	153	266	114	99	15	0	86.8
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	245	29	0	89.4


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  N  L  S  L  I  C  T  V  S  G  A  S  I  S  S  S  H  Y  Y  W  G  W  
                    Query_11309  1    CAGGACTGGTGAAGCCCTCGGAGAACCTGTCCCTCATATGCACTGTCTCTGGTGCCTCCATCAGCAGTAGTCATTACTACTGGGGCTGGA  90
V  89.4% (245/274)  IGHV4-39*01  26   ................T.......C...........CC................G................AG.................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  S  P  G  K  G  L  E  W  I  G  S  I  D  Y  D  G  R  T  F  H  N  P  S  L  K  R  R  
                    Query_11309  91   TCCGCCAGTCCCCAGGGAAGGGCCTGGAGTGGATTGGGAGTATCGATTACGATGGGAGAACCTTCCACAATCCGTCTCTCAAGAGGCGAG  180
V  89.4% (245/274)  IGHV4-39*01  116  ........C.............G.....................T....TAG......C....A.T....C.....C........T....  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  V  S  S  Y  T  S  K  N  Q  F  S  V  R  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  
                    Query_11309  181  TCACCGTGTCCTCATACACGTCCAAGAACCAGTTCTCCGTGAGGCTGAGTTCCGTGACCGCCGCAGACACGGCTCTGTATTACTGTGCGA  270
V  89.4% (245/274)  IGHV4-39*01  206  .....A.A...GT.G.......................C...A......C..T.....................G...............  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------CDR3-IMGT------------>                                  
                                      R  H  W  A  P  A  G  P  G  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11309  271  GACATTGGGCACCAGCTGGGCCGGGTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  336
V  89.4% (245/274)  IGHV4-39*01  296  ....--------------------------------------------------------------  299
                                      R                                                                 
D  90.9% (10/11)    IGHD6-13*01  8    --------...G.......-----------------------------------------------  18
J  95.1% (39/41)    IGHJ4*02     8    -------------------------.....A..............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_153017

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           333     1e-93
IGHD3-3*01                                                                                            10.3    123  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTCTTC	TTTTT	CTCCAAGAGAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTCTTCTTTTTCTCCAAGAGAGAGTCTACTACTTTGACTAC	ARSLLFLQERVYYFDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  K  S  G  G  Y  Y  W  S  W  V  R  Q  H  P  G  K  G  
                    Query_11310  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTTCATCAAGAGTGGTGGCTACTACTGGAGCTGGGTCCGCCAGCACCCAGGGAAGGGCC  93
V  93.1% (230/247)  IGHV4-31*02  50   .....TCC...A.....................C.....GC........T...............A........................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  A  T  S  
                    Query_11310  94   TGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGCCACGTCTA  183
V  93.1% (230/247)  IGHV4-31*02  140  .................................G.............C......................C........A.A........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  S  L  L  F  L  Q  E  
                    Query_11310  184  AGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACTGTCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTCTTCTTTTTCTCCAAGAGA  273
V  93.1% (230/247)  IGHV4-31*02  230  ....................C....C..........C..............................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD3-3*01   10   ---------------------------------------------------------------------------.....----------  14

                                      T------------------>                                  
                                      R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11310  274  GAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (48/48)   IGHJ4*02     1    ------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_153016

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           402     3e-114
IGHD2-21*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	ATTTTGGTGG	ATAGAGATAGAGTTCC	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTG	ARGGFWWIEIEFRMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  Y 
                    Query_11311  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACCGACTAT  91
V  94.5% (273/289)  IGHV1-18*01  7    .............................................................................C......AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  W  I  S  A  Y  T  G  N  T  K  N  A  Q 
                    Query_11311  92   GGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGATGGATCAGCGCTTACACTGGTAATACGAAAAATGCACAA  181
V  94.5% (273/289)  IGHV1-18*01  97   .......G.....................................A.....................A......C..A..CT.......G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  V  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_11311  182  AAAGTCCAGGGCAGAGTGACCATGACCACAGACACATCCACGAGAACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.5% (273/289)  IGHV1-18*01  187  ..GC.............C..........................C...............C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  G  G  F  W  W  I  E  I  E  F  R  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_11311  272  GTGTATTACTGTGCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTGTGGGGCCAAGGGACCACGGTCACCGTCTCC  361
V  94.5% (273/289)  IGHV1-18*01  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD2-21*01  6    -----------------------...G......---------------------------------------------------------  15
J  97.7% (43/44)    IGHJ6*02     19   -------------------------------------------------..........C..............................  59

                                         
                                       S 
                    Query_11311  362  TCA  364
J  97.7% (43/44)    IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_153014

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-20*01                                                                                           357     1e-100
IGHD3-22*01                                                                                           12.2    32    
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-20*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGGGCACTG	GGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGATGGGGCACTGGGTTATTACTATGGTATCGACGTC	VRDGALGYYYGIDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11312  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGGCATGAGCTGGGTCCGCCAAGCTCCGGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-20*01  47   ............................................................................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  H  W  N  G  A  S  T  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  A  
                    Query_11312  91   AGTGGGTCTCTGGTATTCATTGGAATGGTGCAAGTACAGCTTATGCAGACTCTGTGAAGGGCCGATTCACCATTTCCAGAGACATTGCCA  180
V  95.6% (239/250)  IGHV3-20*01  137  .................A............GT..C....G.................................C..........AC....  226
                                      E  W  V  S  G  I  N  W  N  G  G  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  V  R  D  G  A  L  G  Y  Y  
                    Query_11312  181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCCTTGTATCACTGTGTGCGAGATGGGGCACTGGGTTATTACT  270
V  95.6% (239/250)  IGHV3-20*01  227  ...............................................................C.A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R                       
D  100.0% (6/6)     IGHD3-22*01  20   --------------------------------------------------------------------------------......----  25
J  94.1% (48/51)    IGHJ6*02     12   --------------------------------------------------------------------------------------....  15

                                      ------------->                                 
                                      Y  G  I  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_11312  271  ATGGTATCGACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  317
J  94.1% (48/51)    IGHJ6*02     16   .C.....G.............A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_109713

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           318     6e-89
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	126	24	16	8	0	66.7
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_11313  2    CCCTGTCCCTCACCTGCGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  91.1% (225/247)  IGHV3-21*01  50   .....AGA...T....T........................AG...............................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  K  
                    Query_11313  92   GGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCAAGA  181
V  91.1% (225/247)  IGHV3-21*01  140  .................AG.AG..G..G.T....A........A.......................................G......  229
                                      W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><----------------------CDR3-IMG
                                      K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  G  
                    Query_11313  182  AGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTGGTT  271
V  91.1% (225/247)  IGHV3-21*01  230  .C...C...A...........................G...........G.................-----------------------  296
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (15/15)   IGHD3-22*01  11   -----------------------------------------------------------------------------.............  23

                                      T--------------------->                                 
                                      Y  P  L  D  G  M  D  V  W  G  Q  G  S  T  V  T  V  S  S 
                    Query_11313  272  ATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGTCCACGGTCACCGTCTCCTCA  327
D  100.0% (15/15)   IGHD3-22*01  24   ..------------------------------------------------------  25
J  97.9% (46/47)    IGHJ6*02     16   ---------..........................A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_109710

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           305     3e-85
IGHD3-10*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	CCCCTGACGTT	TTACTATACTTCGGGGAG	CCTATCCTAGGTCG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGCCCCTGACGTTTTACTATACTTCGGGGAGCCTATCCTAGGTCGTGCTCTTGATATC	AKAPDVLLYFGEPILGRALDI	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	222	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  D  S  E  V  T  F  T  T  C  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11314  1    GGTCCCTGAGACTCTCCTGTACAGACTCTGAAGTCACCTTTACCACCTGTGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.2% (222/249)  IGHV3-23*01  47   ....................G...C.....G.T.........G..G..A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  A  S  G  A  N  T  Y  Y  A  D  S  A  K  G  R  F  T  L  S  R  D  N  S  
                    Query_11314  91   AGTGGGTCGCGTCTATTTCTGCGAGTGGTGCTAACACATACTACGCAGACTCCGCGAAGGGCCGGTTCACCCTCTCCAGAGACAATTCCC  180
V  89.2% (222/249)  IGHV3-23*01  137  ........T.AG.....AG..GT.......G..G....................T................A.................A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      Q  N  T  L  L  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  P  D  V  L  L  Y  
                    Query_11314  181  AGAACACACTACTTCTGCAGATGGACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCAAAAGCCCCTGACGTTTTACTATACT  270
V  89.2% (222/249)  IGHV3-23*01  227  .......G..GTA......A...A........................................G....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.9% (16/18)    IGHD3-10*01  4    --------------------------------------------------------------------------------.......GG.  13

                                      DR3-IMGT-------------------------->                                  
                                      F  G  E  P  I  L  G  R  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11314  271  TCGGGGAGCCTATCCTAGGTCGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  339
D  88.9% (16/18)    IGHD3-10*01  14   ........-------------------------------------------------------------  21
J  97.9% (46/47)    IGHJ3*02     4    ----------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_109717

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           372     2e-105
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	CGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	ARPSSASGWHFDN	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	264	26	0	91


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  V  T  G  H  N  L  S  S  V
                    Query_11315  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGTGAGTCTCTGAAGATCTCCTGTAAGGTCACTGGACACAACTTAAGCAGTGT  90
V  91.0% (264/290)  IGHV5-51*01  6    .......................................G.........................GTT.....T...G...T.C...CTA  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  D  I  R  Y  S  P
                    Query_11315  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGATATTAGATATAGTCC  180
V  91.0% (264/290)  IGHV5-51*01  96   ........G..................................................AT...GG...........CC.....C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  G
                    Query_11315  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGG  270
V  91.0% (264/290)  IGHV5-51*01  186  .............................C..A.AA........G............................................C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11315  271  CATGTATTACTGTGCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  91.0% (264/290)  IGHV5-51*01  276  ....................------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_109715

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         386     1e-109
IGHD4-4*01                                                                                            14.1    9.4   
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-4*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATAGAGAC	GACTATAGTA	CGTCGTCCTC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAGAGACGACTATAGTACGTCGTCCTCCGACCCC	ARHRDDYSTSSSDP	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  A  N  H
                    Query_11316    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCAGGATACAGCTTTGCTAATCA  90
V  92.7% (268/289)  IGHV5-10-1*01  6    .....................................................................T............A.C.GCT.  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  M  L  D  P  S  D  S  Y  S  N  Y  S  P
                    Query_11316    91   CTGGATCACCTGGGTCCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGATGCTTGATCCCAGTGACTCTTATAGCAACTACAGTCC  180
V  92.7% (268/289)  IGHV5-10-1*01  96   ........G......G......A..............................G.A.......T.............C.........C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  F  S  A  D  K  T  I  N  T  A  Y  L  H  W  S  S  L  K  A  S  D  P  A
                    Query_11316    181  GTCCTTCCAAGGCCACGTCACCTTCTCAGCTGACAAGACCATCAACACTGCCTACCTACATTGGAGCAGCCTGAAGGCCTCGGACCCCGC  270
V  92.7% (268/289)  IGHV5-10-1*01  186  ......................A..............T......G............G..G........................A....  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------CDR3-IMGT--------------->                                  
                                          I  Y  Y  C  A  R  H  R  D  D  Y  S  T  S  S  S  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11316    271  CATATATTACTGTGCGAGACATAGAGACGACTATAGTACGTCGTCCTCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  92.7% (268/289)  IGHV5-10-1*01  276  ...G...............----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                       
D  90.0% (9/10)     IGHD4-4*01     2    ----------------------------.....C....---------------------------------------------------  11
J  100.0% (41/41)   IGHJ5*02       11   ------------------------------------------------.........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_109714

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            325     3e-91
IGHD3-16*01                                                                                           12.2    31   
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GAGGAGAGACACG	GGGGGA	N/A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGAGAGGAGAGACACGGGGGGAGATGCTCTTCATATC	ATERRDTGGDALHI	239	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	10	1	0	90.9
CDR1-IMGT	26	49	24	20	4	0	83.3
FR2-IMGT	50	100	51	48	3	0	94.1
CDR2-IMGT	101	124	24	24	0	0	100
FR3-IMGT	125	238	114	111	3	0	97.4
CDR3-IMGT (germline)	239	246	8	7	1	0	87.5
Total	N/A	N/A	232	220	12	0	94.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  R  F  N  F  N  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  D  I  
                    Query_11317  15   GTACAGCCTCTAGATTCAACTTTAATAGTTATTGGATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCGACATAA  104
V  94.8% (220/232)  IGHV3-7*01   65   ..G........G......C.....G...C..........GC..........................................A......  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_11317  105  AGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGC  194
V  94.8% (220/232)  IGHV3-7*01   155  ..........................................................................................  244
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      Q  M  T  S  L  R  A  E  D  T  A  I  Y  Y  C  A  T  E  R  R  D  T  G  G  D  A  L  H  I  W  
                    Query_11317  195  AAATGACCAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGACAGAGAGGAGAGACACGGGGGGAGATGCTCTTCATATCTGGG  284
V  94.8% (220/232)  IGHV3-7*01   245  ......A.........................G.G.............G...--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (6/6)     IGHD3-16*01  18   -----------------------------------------------------------------......-------------------  23
J  91.8% (45/49)    IGHJ3*02     2    -----------------------------------------------------------------------......T..G.........  20

                                                                    
                                      G  Q  G  T  M  V  T  V  S  S  
                    Query_11317  285  GCCAGGGAACAATGGTCACCGTCTCTTCAG  314
J  91.8% (45/49)    IGHJ3*02     21   ....A..G......................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_109718

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           341     5e-96
IGHD2-2*01                                                                                            18.0    0.59 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCACA	ATTCGCCC	AGTACCGGCTGC	CCCTTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAATTCGCCCAGTACCGGCTGCCCCTTGCTTTGACTAC	ATIRPVPAAPCFDY	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	236	18	0	92.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  F  K  N  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11318  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCTTTCAAAAACGCCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTG  90
V  92.9% (236/254)  IGHV3-15*01  47   .......T...........................A......GT.............G..............................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  E  T  D  E  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_11318  91   AGTGGGTTGGCCGTATTAAAAGTGAAACTGATGAGGGGACAACAGACTATGCAGCACCCGTGAAAGGCAGATTCACCATCTCCAGAGATG  180
V  92.9% (236/254)  IGHV3-15*01  137  ......................CA.........GT..............C..T.............................A.......  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  S  E  D  T  G  V  Y  Y  C  A  T  I  R  P  V  P  
                    Query_11318  181  ATTCAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAAGTGAGGACACAGGCGTGTATTATTGTGCCACAATTCGCCCAGTACCGG  270
V  92.9% (236/254)  IGHV3-15*01  227  ..........................................CC..........C.........C...A.....----------------  300
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  91.7% (11/12)    IGHD2-2*01   14   ----------------------------------------------------------------------------------......A.  21

                                      IMGT--------------->                                  
                                      A  A  P  C  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_11318  271  CTGCCCCTTGCTTTGACTACTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTCAG  324
D  91.7% (11/12)    IGHD2-2*01   22   ....--------------------------------------------------  25
J  97.7% (43/44)    IGHJ4*02     5    ----------.......................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_152310

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           347     7e-98
IGHD2-2*01                                                                                            12.2    32   
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAATATCGG	AGTACC	CCTTAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAATATCGGAGTACCCCTTATTACTTTGACTAC	ARDQYRSTPYYFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11319  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGA  90
V  94.4% (236/250)  IGHV3-30*04  47   ...........................................T..C..........................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      K  W  V  A  V  I  W  Y  D  G  S  N  K  F  Y  E  D  S  V  K  D  R  F  T  I  S  R  D  N  S  
                    Query_11319  91   AGTGGGTGGCAGTTATATGGTATGATGGCAGTAATAAATTCTATGAAGACTCCGTGAAGGACCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (236/250)  IGHV3-30*04  137  ..................CA........A..........A...C.C..............G.............................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  V  F  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  D  Q  Y  R  S  T  P  
                    Query_11319  181  AGAACACGGTGTTTCTGCAAATGAACAGCCTGAGACCTGAGGACACGGCTGTATATTACTGTGCGAGAGATCAATATCGGAGTACCCCTT  270
V  94.4% (236/250)  IGHV3-30*04  227  ........C...A......................G................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-2*01   14   --------------------------------------------------------------------------------......----  19

                                      ------------->                                
                                      Y  Y  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S
                    Query_11319  271  ATTACTTTGACTACTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTC  316
J  97.7% (43/44)    IGHJ4*02     3    --.........................C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_302494

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           358     4e-101
IGHD3-10*01                                                                                           21.8    0.043 
IGHJ5*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GAGGAGTCGCGGCGTCACCTT	TTACTTTGGTTTGGGGA	CTTCTGGAGGA	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAGGAGTCGCGGCGTCACCTTTTACTTTGGTTTGGGGACTTCTGGAGGATGGTTCGACCCC	ARGRSRGVTFYFGLGTSGGWFDP	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11320  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGCTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  96.7% (237/245)  IGHV4-34*01  49   ...........................................G............C.................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11320  91   TGGATTGGCGAAATCAATCATAGTGGCAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCTGTAGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-34*01  139  ........G.................A............................................A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  G  R  S  R  G  V  T  F  Y 
                    Query_11320  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACTCGGCTGTGTATTACTGTGCGAGAGGGAGGAGTCGCGGCGTCACCTTTTAC  270
V  96.7% (237/245)  IGHV4-34*01  229  ...................G...............G...A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  88.2% (15/17)    IGHD3-10*01  4    --------------------------------------------------------------------------------------....  7

                                      3-IMGT----------------------------->                                  
                                       F  G  L  G  T  S  G  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11320  271  TTTGGTTTGGGGACTTCTGGAGGATGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  88.2% (15/17)    IGHD3-10*01  8    .A.....C.....---------------------------------------------------------  20
J  100.0% (46/46)   IGHJ5*02     6    ------------------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_152317

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGAGGTTTTTGGTGTCC	TTCGGGGAGTTATT	TCCCCTTACCC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGAGGTTTTTGGTGTCCTTCGGGGAGTTATTTCCCCTTACCCCTTTCACTAC	AKDEVFGVLRGVISPYPFHY	237	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	122	24	13	5	6	54.2
FR3-IMGT	123	236	114	109	5	0	95.6
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	250	230	14	6	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11321  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCGACTACGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  92.0% (230/250)  IGHV3-23*01  47   ............................................AG...T...................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  G  I  S        N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11321  91   AGTGGGTCTCAGCTATTGGAATTAGT------AACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  174
V  92.0% (230/250)  IGHV3-23*01  137  .................A.TGG....GGTGGT.G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  E  M  E  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  E  V  F  G  V  L  
                    Query_11321  175  AGAACACTCTGTATCTGGAAATGGAGAGCCTGAGAGCCGAGGACACGGCCCTATATTACTGTGCGAAAGATGAGGTTTTTGGTGTCCTTC  264
V  92.0% (230/250)  IGHV3-23*01  227  .......G.........C.....A.C........................G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (14/14)   IGHD3-10*01  13   ---------------------------------------------------------------------------------------...  15

                                      R3-IMGT------------------------>                                
                                      R  G  V  I  S  P  Y  P  F  H  Y  W  G  Q  G  A  L  V  T  V  S  S
                    Query_11321  265  GGGGAGTTATTTCCCCTTACCCCTTTCACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTC  328
D  100.0% (14/14)   IGHD3-10*01  16   ...........-----------------------------------------------------  26
J  95.2% (40/42)    IGHJ4*02     5    ----------------------....G.................A...................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_216881

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           380     1e-107
IGHD3-16*01                                                                                           12.2    36    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACTTCTCCCCGGGTCCCCC	TGGGGG	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACTTCTCCCCGGGTCCCCCTGGGGGCCCTTTGACTCT	ARTLLPGSPWGPFDS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  A  V  R  R  P  G  E  S  L  T  I  S  C  Q  G  S  G  Y  R  V  P  T  H
                    Query_11322  1    GCAGCTGGTGCAGTCTGGAGCAGCGGTGAGAAGGCCCGGGGAGTCTCTGACGATTTCCTGTCAGGGTTCTGGATACAGAGTTCCCACCCA  90
V  92.0% (266/289)  IGHV5-51*01  6    .......................A.....A..A.................A...C......A................CT..A...G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_11322  91   TTGGATCGGGTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  92.0% (266/289)  IGHV5-51*01  96   C........C......................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  V  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  A
                    Query_11322  181  GTCCTTCCAAGGCCAGGTCACCATCTCTGTCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACCCCGC  270
V  92.0% (266/289)  IGHV5-51*01  186  ...........................A.C..........A...G........................C...............A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        T  Y  F  C  A  R  T  L  L  P  G  S  P  W  G  P  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11322  271  CACATATTTCTGTGCGAGAACACTTCTCCCCGGGTCCCCCTGGGGGCCCTTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  92.0% (266/289)  IGHV5-51*01  276  ..TG....A..........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------......--------------------------------------------  22
J  95.5% (42/44)    IGHJ4*02     5    ------------------------------------------------........AC................................  46

                                        
                                        
                    Query_11322  361  AG  362
J  95.5% (42/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_319484

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           327     9e-92
IGHD1-1*01                                                                                            10.3    124  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTCTCACAAGGCTTCGGATGG	CAACT	CGGCCCCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGAGGGTCTCACAAGGCTTCGGATGGCAACTCGGCCCCTCACTTTGACTAC	SRGSHKASDGNSAPHFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  F  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11323  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTAATTTTGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-30*04  47   ....................................C........GC.A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  Q  G  R  N  K  N  Y  E  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11323  91   AGTGGGTGGCTGTTATATCATACCAAGGAAGAAATAAAAACTACGAAGACTCCGTGAAGGGCCGCTTTACCATCTCCAGAGACAATTCCA  180
V  92.0% (229/249)  IGHV3-30*04  137  ..........A...........TG.T.....T......T......C..................A..C......................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  S  L  E  M  N  S  L  R  T  E  D  T  A  V  Y  F  C  S  R  G  S  H  K  A  S  D  
                    Query_11323  181  AGAACACGCTGTCTCTGGAAATGAACAGCCTGAGAACTGAGGACACGGCTGTCTACTTCTGTTCGAGAGGGTCTCACAAGGCTTCGGATG  270
V  92.0% (229/249)  IGHV3-30*04  227  ............A....C.................G................G..T.A....G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      IMGT--------------------->                                  
                                      G  N  S  A  P  H  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_11323  271  GCAACTCGGCCCCTCACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCTTCAG  330
D  100.0% (5/5)     IGHD1-1*01   5    -.....------------------------------------------------------  9
J  95.6% (43/45)    IGHJ4*02     4    ---------------........................C...............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_115198

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            420     7e-120
IGHD3-22*01                                                                                           46.8    1e-09 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACACA	N/A	ATTACTATGATAGTAGTGGTTATT	CTTTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAATTACTATGATAGTAGTGGTTATTCTTTTTTTGACTAC	AHNYYDSSGYSFFDY	263	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	30	0	0	100
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	114	0	0	100
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	269	269	0	0	100


Alignments

                                       <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                         L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R
                     Query_11324  1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCG  90
V  100.0% (269/269)  IGHV2-5*01   30   ..........................................................................................  119
                                         L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                       -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                         Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T
                     Query_11324  91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCAC  180
V  100.0% (269/269)  IGHV2-5*01   120  ..........................................................................................  209
                                         Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                       ---------------------FR3-IMGT----------------------------------------------------><-------
                                         I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  N
                     Query_11324  181  CATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAA  270
V  100.0% (269/269)  IGHV2-5*01   210  .........................................................................................-  298
                                         I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   
D  100.0% (24/24)    IGHD3-22*01  3    -----------------------------------------------------------------------------------------.  3

                                       ----------CDR3-IMGT----------------->                                  
                                         Y  Y  D  S  S  G  Y  S  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_11324  271  TTACTATGATAGTAGTGGTTATTCTTTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  341
D  100.0% (24/24)    IGHD3-22*01  4    .......................------------------------------------------------  26
J  100.0% (43/43)    IGHJ4*02     6    ----------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_115199

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           327     9e-92
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	GGTAAAGACCCCGGAGGGCGCC	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTAAAGACCCCGGAGGGCGCCTACTTCTCCTACTACGGGATGGACGTC	ARVKTPEGAYFSYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	228	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  P  R  L  S  C  A  G  S  G  F  T  F  S  D  Y  T  L  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11325  1    GGTCCCCGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTCAGTGATTATACTCTGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  92.3% (228/247)  IGHV3-21*01  47   ......T.................C...................AGC....GCA...............................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  S  S  G  Y  Y  I  Y  Y  A  D  S  V  N  G  R  F  T  I  S  R  D  N  A  
                    Query_11325  91   AGTGGGTCTCATCCGTTAGCAGTAGTGGTTATTACATATACTACGCAGACTCAGTGAACGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.3% (228/247)  IGHV3-21*01  137  ..............A....T......A..AG...........................G...............................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  V  Y  L  Q  M  N  N  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  K  T  P  E  G  A  
                    Query_11325  181  AGAACTCAGTGTATCTGCAAATGAACAACCTGAGAGCCGACGACACGGCTGTTTATTACTGTGCGAGGGTAAAGACCCCGGAGGGCGCCT  270
V  92.3% (228/247)  IGHV3-21*01  227  ........C..................G............G...........G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  91.7% (55/60)    IGHJ6*02     3    -----------------------------------------------------------------------------------------.  3

                                      IMGT--------------------->                                 
                                      Y  F  S  Y  Y  G  M  D  V  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_11325  271  ACTTCTCCTACTACGGGATGGACGTCTGGGGCCAGGGGACCGCGGTCACCGTCTCCTCA  329
J  91.7% (55/60)    IGHJ6*02     4    ...A..A.........T.................A......A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_115194

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-13*01                                                                                           369     2e-104
IGHJ2*01                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-13*01	N/A	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	CCCCTTTAGGTG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCCCCTTTAGGTGACTGGTACTTCGATCTC	ARAPLGDWYFDL	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	241	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  D  M  H  W  V  R  Q  A  T  G  K  G  L  
                    Query_11326  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTCCTACGACATGCACTGGGTCCGCCAAGCTACAGGAAAAGGTCTGG  90
V  98.0% (241/246)  IGHV3-13*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  D  M  H  W  V  R  Q  A  T  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  A  T  A  G  D  T  Y  Y  P  G  S  V  K  G  R  F  T  I  S  R  E  S  A  K  
                    Query_11326  91   AGTGGGTCTCAGCTATTGCTACTGCTGGTGACACATACTATCCAGGCTCCGTGAAGGGCCGATTCACCATCTCCAGAGAAAGTGCCAAGA  180
V  98.0% (241/246)  IGHV3-13*01  137  ..................G..............................................................A........  226
                                      E  W  V  S  A  I  G  T  A  G  D  T  Y  Y  P  G  S  V  K  G  R  F  T  I  S  R  E  N  A  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  S  L  Y  L  Q  I  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R  A  P  L  G  D  W  Y  F  
                    Query_11326  181  ACTCCTTGTATCTTCAAATAAACAGCCTGAGAGCCGGGGACACGGCTGTGTATTACTGTGCAAGAGCCCCTTTAGGTGACTGGTACTTCG  270
V  98.0% (241/246)  IGHV3-13*01  227  ...................G..............................................------------------------  292
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R                          
J  98.0% (50/51)    IGHJ2*01     3    ------------------------------------------------------------------------------............  14

                                      ---->                                  
                                      D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11326  271  ATCTCTGGGGCCGTGGCACCCTGGTCACAGTCTCCTCAG  309
J  98.0% (50/51)    IGHJ2*01     15   ............................T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_115195

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_11327  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_11327  91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_11327  181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_11327  271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_115196

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           413     2e-117
IGHD1-20*01                                                                                           29.5    2e-04 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-20*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGAAAA	TATAACTGGAACGAC	GGAAT	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATC	ARVGKYNWNDGIAFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N  S  F
                    Query_11328  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAACAGCTT  90
V  95.5% (277/290)  IGHV1-69*01  6    ..................G.......................C........................................G.....A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  N  W  V  R  Q  A  P  G  H  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  K  Y  A  Q
                    Query_11328  91   TGCTGTCAACTGGGTGCGACAGGCCCCTGGACATGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAACAAAATACGCACA  180
V  95.5% (277/290)  IGHV1-69*01  96   ....A...G........................A..........................................G....C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_11328  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGGACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.5% (277/290)  IGHV1-69*01  186  .............................................C....C.......................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  V  G  K  Y  N  W  N  D  G  I  A  F  D  I  W  G  Q  G  T  I  V  T  V  S
                    Query_11328  271  CGTTTATTATTGTGCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATCTGGGGCCAAGGGACAATAGTCACCGTCTC  360
V  95.5% (277/290)  IGHV1-69*01  276  ...G.....C..........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (15/15)   IGHD1-20*01  3    ----------------------------...............-----------------------------------------------  17
J  95.7% (45/47)    IGHJ3*02     4    ------------------------------------------------...T..........................G...........  45

                                           
                                        S  
                    Query_11328  361  TTCAG  365
J  95.7% (45/47)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_115197

Length=407
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           383     1e-108
IGHD2-2*01                                                                                            33.4    2e-05 
IGHJ2*01                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGAGAGGGACT	AGGATATTGTAGTAGTA	GTGCCGGATGCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGAGAGGGACTAGGATATTGTAGTAGTAGTGCCGGATGCCACTGGTACTTCGATCTC	AREGEGLGYCSSSAGCHWYFDL	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	268	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  R  S  Y
                    Query_11329  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGGAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGGAGTTA  90
V  92.1% (268/291)  IGHV1-69*01  6    ..................G............A....................................................C..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  L  R  Q  A  P  G  Q  G  F  E  W  M  G  G  I  I  P  I  F  G  T  P  N  N  A  Q
                    Query_11329  91   TGCTATCAGTTGGCTACGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGAGGAATCATTCCTATCTTTGGTACCCCAAATAACGCACA  180
V  92.1% (268/291)  IGHV1-69*01  96   .........C...G.G.....................C................G.....C..............AG....CT.......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  Q  G  R  V  T  I  T  A  D  E  N  T  A  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_11329  181  GAATTTCCAGGGCAGAGTCACGATTACCGCGGACGAAAACACGGCCACAGTTTACATGGAACTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  92.1% (268/291)  IGHV1-69*01  186  ...G.................................TC....AG.....CC........G.............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------------CDR3-IMGT--------------------------->           
                                        V  Y  Y  C  A  R  E  G  E  G  L  G  Y  C  S  S  S  A  G  C  H  W  Y  F  D  L  W  G  R  G
                    Query_11329  271  CGTGTACTACTGTGCGAGAGAGGGAGAGGGACTAGGATATTGTAGTAGTAGTGCCGGATGCCACTGGTACTTCGATCTCTGGGGCCGTGG  360
V  92.1% (268/291)  IGHV1-69*01  276  ......T..............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD2-2*01   1    ---------------------------------.................----------------------------------------  17
J  100.0% (51/51)   IGHJ2*01     3    --------------------------------------------------------------............................  30

                                                             
                                        T  L  V  T  V  S  S  
                    Query_11329  361  CACCCTGGTCACTGTCTCCTCAG  383
J  100.0% (51/51)   IGHJ2*01     31   .......................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39867768


Query= Query_115190

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           344     6e-97
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TC	GTGGGAGCTACT	GGTCGGCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGTGGGAGCTACTGGTCGGCCTTTTGACTAC	ARVVGATGRPFDY	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	126	24	22	2	0	91.7
FR3-IMGT	127	240	114	111	3	0	97.4
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  R  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_11330  2    CCCTGTCCCTCACCTGCGCAGCCTCTGGATTCACCTTCAGGAATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAAT  91
V  94.7% (233/246)  IGHV3-48*03  50   .....AGA...T....T.......................T.G.............................................G.  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  Y  I  S  S  S  G  H  T  I  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  
                    Query_11330  92   GGGTTTCATACATTAGTAGTAGTGGTCATACCATAGACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGA  181
V  94.7% (233/246)  IGHV3-48*03  140  ..........................AG.......T......................................................  229
                                      W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><--------------CDR3-IMGT-------
                                      N  S  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  H  C  A  R  V  V  G  A  T  G  R  P  
                    Query_11330  182  ACTCACTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATCACTGTGCGAGAGTCGTGGGAGCTACTGGTCGGCCTT  271
V  94.7% (233/246)  IGHV3-48*03  230  .........A...........................................T............------------------------  295
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (12/12)   IGHD1-26*01  7    --------------------------------------------------------------------............----------  18
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  Q  V  P  V  S  S  
                    Query_11330  272  TTGACTACTGGGGCCAGGGAACCCAGGTCCCCGTCTCCTCAG  313
J  95.3% (41/43)    IGHJ4*02     7    ........................T....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_115191

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            360     1e-101
IGHD3-10*01                                                                                           52.6    2e-11 
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GGGGTCCCCA	TATTACTATGGTTCGGGGAGTTATTAT	CG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGAGGGGTCCCCATATTACTATGGTTCGGGGAGTTATTATCGCTGGTTCGACCCC	AKEGSPYYYGSGSYYRWFDP	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  D  S  Y  A  T  H  W  V  R  Q  T  P  G  K  G  L  
                    Query_11331  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTGATAGTTATGCCACGCACTGGGTCCGGCAAACTCCAGGGAAGGGCCTGG  90
V  96.0% (240/250)  IGHV3-9*01   47   ....................................C.......GA........T................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  D  W  N  S  G  S  I  G  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_11331  91   AGTGGGTCTCAGGTATTGATTGGAATAGTGGGAGCATAGGCTATGCGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-9*01   137  .................AG............T.........................A................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  K  E  G  S  P  Y  Y  Y  
                    Query_11331  181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGACCTGAGGACACGGCCTTGTATTACTGTGCAAAAGAGGGGTCCCCATATTACTATG  270
V  96.0% (240/250)  IGHV3-9*01   227  ...................................G..................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (27/27)   IGHD3-10*01  2    --------------------------------------------------------------------------------..........  11

                                      R3-IMGT------------------------>                                  
                                      G  S  G  S  Y  Y  R  W  F  D  P  W  G  Q  G  T  L  V  T  V  A  S  
                    Query_11331  271  GTTCGGGGAGTTATTATCGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTTACCGTCGCCTCAG  336
D  100.0% (27/27)   IGHD3-10*01  12   .................-------------------------------------------------  28
J  95.7% (45/47)    IGHJ5*02     5    -------------------.................................C......T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_115192

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     8e-121
IGHD3-9*01                                                                                            23.8    0.012 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTTTAAG	CGATATTTTGAC	CGGGGAG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTAAGCGATATTTTGACCGGGGAGACTTTGACTTG	ARHFKRYFDRGDFDL	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	283	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  N  F  A  
                    Query_11332  2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAACTTTGCCA  91
V  95.9% (283/295)  IGHV5-51*01  2    ..G..................................................................G...........G....A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  P  Y  
                    Query_11332  92   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCCCATACA  181
V  95.9% (283/295)  IGHV5-51*01  92   G..................................................................................AG.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  L  S  A  D  K  S  I  S  T  A  Y  L  Q  W  N  R  L  K  A  S  D  
                    Query_11332  182  GCCCGTCCTTCCAAGGCCAGGTCACCCTTTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAACAGGCTGAAGGCCTCGGACA  271
V  95.9% (283/295)  IGHV5-51*01  182  ..........................A.C........................................G...C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  I  Y  Y  C  A  R  H  F  K  R  Y  F  D  R  G  D  F  D  L  W  G  Q  G  T  L  V  T  V  
                    Query_11332  272  CCGCCATATATTACTGTGCGAGACATTTTAAGCGATATTTTGACCGGGGAGACTTTGACTTGTGGGGCCAGGGAACCCTGGTCACCGTCT  361
V  95.9% (283/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD3-9*01   7    --------------------------------............----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    ---------------------------------------------------.........AC............................  42

                                            
                                      S  S  
                    Query_11332  362  CCTCAG  367
J  95.6% (43/45)    IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_115193

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           329     3e-92
IGHD2-8*01                                                                                            12.2    31   
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TAATGG	CCCGACTGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGGCCCGACTGAACTACGGCATGGACGTC	ARLMARLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  L  T  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_11333  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCCTCACCAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCCGGGAAGGGACTGGAA  90
V  93.0% (227/244)  IGHV4-59*08  49   ..................A............G....A...GT..................A.............A..............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  R  P  N  N  N  P  S  L  R  S  R  V  T  I  S  V  D  A  S  K  N 
                    Query_11333  91   TGGATTGAGTATATCTATTACAGAGGGCGTCCCAACAACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACGCGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*08  139  .......G...............T...A.CA.....T...............A.........................A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  A  R  L  N  Y  G  M 
                    Query_11333  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACTAATGGCCCGACTGAACTACGGCATG  270
V  93.0% (227/244)  IGHV4-59*08  229  ...................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-8*01   13   ----------------------------------------------------------------......--------------------  18
J  94.0% (47/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_11333  271  GACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCGTCA  309
J  94.0% (47/50)    IGHJ6*02     24   .............A.....................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_70104

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            357     1e-100
IGHD1-26*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTGG	AGTGGGACCTACT	CAAAGGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGGAGTGGGACCTACTCAAAGGGTTTGACTAC	ARLEWDLLKGFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11334  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAACTACTGGATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-7*03   47   .............................................G...T.......GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  R  R  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11334  91   AGTGGGTGGCCAACATAAGGCGAGATGGGAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (238/248)  IGHV3-7*03   137  ..................A..A......A.............................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  L  E  W  D  L  L  K  
                    Query_11334  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTTTATTATTGTGCGAGATTGGAGTGGGACCTACTCAAAG  270
V  96.0% (238/248)  IGHV3-7*03   227  ....................................C...............G.....C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD1-26*01  6    ------------------------------------------------------------------------.......G.....-----  18

                                      ---------->                                  
                                      G  F  D  Y  W  G  Q  G  M  L  V  T  V  S  S  
                    Query_11334  271  GGTTTGACTACTGGGGCCAGGGAATGTTGGTCACCGTCTCCTCAG  315
J  93.0% (40/43)    IGHJ4*02     6    --......................CCC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_96484

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           377     8e-107
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	242	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11335  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.6% (242/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11335  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  99.6% (242/243)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_11335  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  99.6% (242/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11335  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_308189

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11336  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11336  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_11336  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11336  271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_335477

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         329     3e-92
IGHD3-3*01                                                                                            16.1    2.3  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GGGGCTACTTTGCCAGTGATGG	TTTTCGAAGTGGTT	N/A	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGGGCTACTTTGCCAGTGATGGTTTTCGAAGTGGTTCTTTTGATATC	ARGGYFASDGFRSGSFDI	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  L  W  V  R  Q  P  P  G  K  G 
                    Query_11337    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGCTCTGGGTGCGGCAGCCTCCAGGGAAGGGC  90
V  92.0% (230/250)  IGHV4-30-2*01  49   ............................................................AG....A.C........A............  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  R  S  G  N  T  Y  Y  N  L  S  L  R  S  R  V  T  I  S  V  D  R  S 
                    Query_11337    91   CTAGAGTGGATTGGGTACATCTATCGAAGTGGGAACACCTACTACAACCTGTCCCTCAGGAGTCGAGTCACCATATCAGTTGACAGGTCC  180
V  92.0% (230/250)  IGHV4-30-2*01  139  ..G......................AT.......G..............C........A.....................A.........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  N  H  F  S  L  I  V  T  S  V  T  A  A  D  S  A  L  Y  Y  C  A  R  G  G  Y  F  A  S  D 
                    Query_11337    181  AAGAACCACTTCTCCCTGATCGTGACATCTGTGACCGCCGCGGACTCGGCCTTGTATTACTGTGCCAGAGGGGGCTACTTTGCCAGTGAT  270
V  92.0% (230/250)  IGHV4-30-2*01  229  ........G..........AGC...GC..................A.....G..................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                        -IMGT--------------------->                                  
                                         G  F  R  S  G  S  F  D  I  W  G  P  G  T  L  V  T  V  S  S  
                    Query_11337    271  GGTTTTCGAAGTGGTTCTTTTGATATCTGGGGCCCAGGGACACTGGTCACCGTCTCCTCAG  331
D  85.7% (12/14)    IGHD3-3*01     10   --....T.G.......---------------------------------------------  23
J  93.3% (42/45)    IGHJ3*02       6    ----------------..................A.......A.............T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_335476

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD3-16*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	TGGGGGA	TGGCGACAATTCTGACATTTCG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGTATGGACGTC	TRVGDGDNSDISYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  I  F
                    Query_11338  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTAGCATCTT  90
V  94.8% (274/289)  IGHV5-51*01  6    ..........................................G..................................G.....C..G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  I  K  Y  S  P
                    Query_11338  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATATCAAATACAGTCC  180
V  94.8% (274/289)  IGHV5-51*01  96   ....................................................A........................C..G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_11338  181  GTCCTTCCAAGGCCAGGTCTCCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCGGTTTGAAGGCCTCGGACACCGC  270
V  94.8% (274/289)  IGHV5-51*01  186  ...................A...............................................A.CC...................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  T  R  V  G  D  G  D  N  S  D  I  S  Y  G  M  D  V  W  G  Q  G  T  K  V  T  V
                    Query_11338  271  CATCTATTACTGTACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGTATGGACGTCTGGGGCCAAGGGACCAAGGTCACCGT  360
V  94.8% (274/289)  IGHV5-51*01  276  ...G.........G.....-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-16*01  17   --------------------.......---------------------------------------------------------------  23
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------------...............................C.........  55

                                             
                                        S  S 
                    Query_11338  361  CTCCTCA  367
J  97.9% (47/48)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_335475

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            294     6e-82
IGHD1-26*01                                                                                           10.3    118  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAACTTTCGCGACATAT	GAGCT	CCA	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAACTTTCGCGACATATGAGCTCCATATGGACGTC	AKTFATYELHMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	98	16	0	86
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	216	28	0	88.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  H  N  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_11339  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTCATAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGTAAGGGCCTG  90
V  88.5% (216/244)  IGHV4-4*02   49   ..................G.................A........AG...........G.....................G.....G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  N  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  M  S  M  A  K  L  K 
                    Query_11339  91   GAGTGGATTGGAGAAATCTATCATAACGGCAACACCAACTACAACCCGTCCCTCCAGAGTCGGGTCACCATGTCAATGGCCAAGTTGAAG  180
V  88.5% (216/244)  IGHV4-4*02   139  ...........G.............GT..G.G......................A.......A........A...G.A.A.....CC...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  F  F  L  K  L  N  D  A  T  A  A  D  T  A  V  Y  Y  C  A  K  T  F  A  T  Y  E  L  H 
                    Query_11339  181  AATCAGTTCTTCCTGAAACTGAACGATGCGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAAAACTTTCGCGACATATGAGCTCCAT  270
V  88.5% (216/244)  IGHV4-4*02   229  ..C.......C......G....G.TC..T.....................G.............--------------------------  292
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (5/5)     IGHD1-26*01  11   ---------------------------------------------------------------------------------.....----  15
J  97.7% (42/43)    IGHJ6*02     20   -----------------------------------------------------------------------------------------.  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_11339  271  ATGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  312
J  97.7% (42/43)    IGHJ6*02     21   ...............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_335474

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           366     2e-103
IGHD6-19*01                                                                                           16.1    2.2   
IGHJ3*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAGGAGGGGGG	TAGCAGTG	CCGGC	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAGGAGGGGGGTAGCAGTGCCGGCGCTTTTGATATC	ARDKEGGSSAGAFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11340  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-21*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  S  S  S  D  Y  I  S  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11340  91   AGTGGGTCTCATCCATTACTAGTAGTAGTGATTACATATCCTACGCAGCCTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (242/250)  IGHV3-21*01  137  ..................G..........AG........A........A.........................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  K  E  G  G  S  S  
                    Query_11340  181  AGAACTCACTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATAAGGAGGGGGGTAGCAGTG  270
V  96.8% (242/250)  IGHV3-21*01  227  ..........G...........................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  6    ----------------------------------------------------------------------------------........  13

                                      ---------------->                                  
                                      A  G  A  F  D  I  W  G  Q  G  A  M  V  T  V  S  S  
                    Query_11340  271  CCGGCGCTTTTGATATCTGGGGCCAAGGGGCAATGGTCACCGTCTCTTCAG  321
J  97.8% (45/46)    IGHJ3*02     5    -----........................A.....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_335473

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         338     5e-95
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	CTTC	CTATGATAGTAGCGGTAATT	CCCTCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGCTTCCTATGATAGTAGCGGTAATTCCCTCAACTACTTTGACTAC	ARASYDSSGNSLNYFDY	250	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	63	36	28	2	6	77.8
FR2-IMGT	64	114	51	48	3	0	94.1
CDR2-IMGT	115	135	21	20	1	0	95.2
FR3-IMGT	136	249	114	109	5	0	95.6
CDR3-IMGT (germline)	250	256	7	7	0	0	100
Total	N/A	N/A	256	238	12	6	93


Alignments

                                        <--------FR1-IMGT---------><-------------CDR1-IMGT------------><--------------------FR2-IM
                                         T  L  S  L  T  C  A  V  S  L  S  R  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G 
                    Query_11341    1    ACCCTGTCCCTCACCTGCGCTGTCTCTCTCTCTCGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCCGGG  90
V  93.0% (238/256)  IGHV4-30-4*01  49   ..................A........G------.....................A..............................A...  132
                                         T  L  S  L  T  C  T  V  S        G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G 

                                        GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                         K  G  L  E  W  I  G  N  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 
                    Query_11341    91   AAGGGCCTGGAGTGGATTGGAAACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTGGAC  180
V  93.0% (238/256)  IGHV4-30-4*01  133  ....................GT..................G.............................................A...  222
                                         K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                        --------FR3-IMGT----------------------------------------------------><--------------------
                                         K  S  K  N  Q  F  S  L  K  M  T  S  V  T  A  E  D  T  A  V  Y  Y  C  A  R  A  S  Y  D  S 
                    Query_11341    181  AAGTCCAAGAACCAGTTCTCCCTGAAGATGACCTCTGTGACTGCCGAAGACACGGCCGTGTATTACTGTGCCAGAGCTTCCTATGATAGT  270
V  93.0% (238/256)  IGHV4-30-4*01  223  .C.........................C...G..............C.............................--------------  298
                                         T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  90.0% (18/20)    IGHD3-22*01    7    --------------------------------------------------------------------------------..........  16

                                        CDR3-IMGT-------------------->                                  
                                         S  G  N  S  L  N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11341    271  AGCGGTAATTCCCTCAACTACTTTGACTACTGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  334
D  90.0% (18/20)    IGHD3-22*01    17   ..T...T...------------------------------------------------------  26
J  97.9% (47/48)    IGHJ4*02       1    ----------------............................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_335472

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           350     8e-99
IGHD3-22*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTACTTTGAT	GGTGCTGGCTCTTACCTAGGTTTCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACTTTGATGGTGCTGGCTCTTACCTAGGTTTCCAC	ARDYFDGAGSYLGFH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  F  S  G  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11342  1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCATCTTCAGTGGCTATGGCATGAACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-33*01  47   ....................G...............C.......A...........C.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_11342  91   AGTGGGTGGCCCTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGCTTCACCGTCTCCAGAGACAACTCCA  180
V  94.8% (237/250)  IGHV3-33*01  137  ..........AG....................................................A......A.............T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  D  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  F  D  G  A  G  
                    Query_11342  181  AGGACACACTGTATCTGCAGATGGACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTACTTTGATGGTGCTGGCT  270
V  94.8% (237/250)  IGHV3-33*01  227  ..A....G...........A...A..............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-22*01  4    ----------------------------------------------------------------------.....A....----------  13

                                      ---------------->                                  
                                      S  Y  L  G  F  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11342  271  CTTACCTAGGTTTCCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (36/36)   IGHJ4*02     13   ---------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_335471

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD1-26*01                                                                                           10.3    115  
IGHJ2*01                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGAG	GTGGG	CTT	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGGTGGGCTTTGGTACTTCGATCTC	ARDRGGLWYFDL	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  D  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11343  1    ACCCTGTCCCTCACCTGCACTGTCTCTGATGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   ............................G..............G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  N  I  Y  H  S  G  S  T  M  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  P  K  N 
                    Query_11343  91   TGGATTGCGAATATCTATCACAGTGGCAGCACAATGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGCCCAAGAAT  180
V  95.1% (233/245)  IGHV4-59*01  139  .......G.T........T.......G.....C.AC.............................................T.......C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  G  G  L  W  Y  F  D 
                    Query_11343  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGAGGTGGGCTTTGGTACTTCGAT  270
V  95.1% (233/245)  IGHV4-59*01  229  ...................G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD1-26*01  7    ----------------------------------------------------------------------.....---------------  11
J  100.0% (49/49)   IGHJ2*01     5    ------------------------------------------------------------------------------............  16

                                      -->                                  
                                       L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11343  271  CTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  307
J  100.0% (49/49)   IGHJ2*01     17   .....................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_265211

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           336     1e-94
IGHD3-22*01                                                                                           18.0    0.61 
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGTC	ATTATTATGATA	AAAGCGATTATTGGAAGC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTCATTATTATGATAAAAGCGATTATTGGAAGCACTTTGACTAC	ARGGHYYDKSDYWKHFDY	246	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  S  G  F  Y  H  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_11344  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCGTCAGCAGCGGTTTTTACCACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  93.2% (232/249)  IGHV4-31*02  50   .....TCC...A.......................A.......T...GG....T.......C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  N  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  
                    Query_11344  94   TGGAGTGGATTGGGTACATCTATAACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACGATATCAGTAGACACGTCTA  183
V  93.2% (232/249)  IGHV4-31*02  140  .......................T.........G...............................G....C...................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  Q  L  S  L  K  P  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  H  Y  Y  D  K  
                    Query_11344  184  AGAACCAGCTCTCCCTGAAGCCGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGGGGGTCATTATTATGATAAAA  273
V  93.2% (232/249)  IGHV4-31*02  230  ........T............T..............................G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD3-22*01  3    ---------------------------------------------------------------------------....C.......---  14

                                      IMGT--------------------->                                  
                                      S  D  Y  W  K  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11344  274  GCGATTATTGGAAGCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
J  100.0% (45/45)   IGHJ4*02     4    ---------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_335479

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           406     1e-115
IGHD3-3*01                                                                                            21.8    0.047 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCCCTCGTCCCCTATA	TTTTGGAGTGG	CT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCCTCGTCCCCTATATTTTGGAGTGGCTACTACTTTGACTAC	ARGPSSPIFWSGYYFDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  D  S  H
                    Query_11345  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCGACAGCCA  90
V  94.8% (275/290)  IGHV1-69*01  6    ..................G...............................................................AG....T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  L  R  Q  A  P  G  Q  G  P  E  W  M  G  G  I  T  P  V  F  G  T  T  N  Y  A  Q
                    Query_11345  91   TGCTATCAGCTGGCTACGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGAGGGATCACCCCTGTCTTTGGTACAACAAACTACGCACA  180
V  94.8% (275/290)  IGHV1-69*01  96   .............G.G......................T....................T....A...........G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  G  S  T  A  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_11345  181  GAGGTTCCAGGGCAGAGTCACGATTACCGCGGACGGATCCACGGCCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  94.8% (275/290)  IGHV1-69*01  186  ..A................................A.......AG.............................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  G  P  S  S  P  I  F  W  S  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_11345  271  CGTCTATTACTGTGCGAGAGGCCCCTCGTCCCCTATATTTTGGAGTGGCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  94.8% (275/290)  IGHV1-69*01  276  ...G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (11/11)   IGHD3-3*01   11   -------------------------------------...........------------------------------------------  21
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------------........................................  40

                                              
                                        S  S  
                    Query_11345  361  CTCCTCAG  368
J  100.0% (48/48)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_335478

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_11346  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_11346  91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_11346  181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11346  271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_300072

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11347  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11347  91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_11347  181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11347  271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_300071

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           400     9e-114
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	CTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	290	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	69	5	0	93.2
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	46	5	0	90.2
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	110	4	0	96.5
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	294	275	19	0	93.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  T  G  E  S  L  K  I  S  C  R  C  S  G  Y  R  F  T  
                    Query_11348  3    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGACCGGGGAGTCTCTGAAGATCTCCTGTAGGTGTTCTGGATACAGGTTTACCA  92
V  93.5% (275/294)  IGHV5-51*01  2    ....G........G........................C...........................A.G.............C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  M  G  M  M  N  P  G  D  S  D  T  R  Y  
                    Query_11348  93   ATTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACATGGGAATGATGAATCCTGGTGACTCTGATACCAGATACA  182
V  93.5% (275/294)  IGHV5-51*01  92   GC..........G...................................GG.....G..C..CT...........................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  P  F  Q  G  Q  V  T  I  S  A  D  E  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  
                    Query_11348  183  GCCCGCCCTTCCAAGGCCAGGTCACCATCTCAGCCGACGAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACA  272
V  93.5% (275/294)  IGHV5-51*01  182  .....T................................A..........C...........................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_11348  273  CCGCCATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  362
V  93.5% (275/294)  IGHV5-51*01  272  ........................------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)   IGHD6-19*01  4    --------------------------------------...............-------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   --------------------------------------------------------..................................  45

                                         
                                      S  
                    Query_11348  363  CAG  365
J  100.0% (37/37)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_300070

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           294     6e-82
IGHD2-2*01                                                                                            18.0    0.59 
IGHJ6*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGACAG	ATTGTCGTAGTCCCCGGTGCT	TC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGACAGATTGTCGTAGTCCCCGGTGCTTCCTACGGTATGGACGTC	ARDRQIVVVPGASYGMDV	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	216	28	0	88.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  S  S  S  Y  F  W  T  W  I  R  Q  P  P  G  Q  G  L  E  
                    Query_11349  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCAGCAGTAGTTACTTCTGGACTTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAGT  93
V  88.5% (216/244)  IGHV4-59*01  50   .....TCC...A........................T...........A.....GC.................A...A............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  V  D  G  S  G  S  P  R  Y  N  P  S  L  K  S  R  V  S  M  S  L  D  T  S  K  N  
                    Query_11349  94   GGATTGGCTATGTCGATGGCAGTGGGAGTCCCAGGTACAACCCCTCCCTCAAGAGTCGAGTCTCCATGTCGCTAGACACGTCCAAGAACC  183
V  88.5% (216/244)  IGHV4-59*01  140  .......G...A..T..TA.........CA...AC...........................A....A..AG..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      R  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  Q  I  V  V  V  P  G  
                    Query_11349  184  GATTCTCCCTGAGGCTGAATTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGACAGATTGTCGTAGTCCCCGGTG  273
V  88.5% (216/244)  IGHV4-59*01  230  AG..........A.....GC............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  81.0% (17/21)    IGHD2-2*01   6    -----------------------------------------------------------------------.....A.....A..A.C..  24

                                      ------------------->                                 
                                      A  S  Y  G  M  D  V  G  G  Q  G  A  S  V  P  V  A  S 
                    Query_11349  274  CTTCCTACGGTATGGACGTCGGGGGCCAAGGGGCCTCGGTCCCCGTCGCCTCA  326
D  81.0% (17/21)    IGHD2-2*01   25   ..---------------------------------------------------  26
J  89.8% (44/49)    IGHJ6*02     14   ----................T...........A..A.....A.....T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_300077

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           297     7e-83
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACGGTAAAGGG	GGTTATTACT	GT	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACGGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTACGGACGTC	ARTVKGVITVYQYFATDV	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	99	15	0	86.8
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	216	26	0	89.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  R  P  G  K  G  L  E  
                    Query_11350  4    CCCTGAGACTCTCCTGTGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCGCCCAGGGAAGGGACTGGAGT  93
V  89.3% (216/242)  IGHV4-34*01  50   .....TCC...A....C..............G...T..................G..............C............G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  I  S  L  D  M  S  K  N  
                    Query_11350  94   GGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGAGTCTCCATATCATTAGACATGTCCAAGAATC  183
V  89.3% (216/242)  IGHV4-34*01  140  ............................C..................C..A...........A........G......C.........C.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  I  S  V  R  V  T  S  V  T  A  A  D  T  A  T  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y  
                    Query_11350  184  AGATCTCCGTGAGGGTGACGTCTGTGACCGCCGCGGACACGGCTACTTATTACTGTGCGAGAACGGTAAAGGGGGTTATTACTGTCTACC  273
V  89.3% (216/242)  IGHV4-34*01  230  ..T.....C...A.C...GC........................GTG...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD3-22*01  20   -------------------------------------------------------------------------..........-------  29
J  91.4% (53/58)    IGHJ6*02     5    -------------------------------------------------------------------------------------....T  9

                                      ------------------->                                 
                                      Q  Y  F  A  T  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11350  274  AGTACTTCGCTACGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  91.4% (53/58)    IGHJ6*02     10   .C....A..G..T........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_150927

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           371     7e-105
IGHD2-2*01                                                                                            10.3    126   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGGA	N/A	CCAGC	GCTGGCGACAATC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGACCAGCGCTGGCGACAATCACTACTTTGACTCC	ARTSAGDNHYFDS	263	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	29	1	0	96.7
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	148	21	17	4	0	81
FR3-IMGT	149	262	114	104	10	0	91.2
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	269	253	16	0	94.1


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  T  T  S  G  M  C  V  T  W  I  R
                    Query_11351  1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCACCACTAGTGGAATGTGTGTGACCTGGATCCG  90
V  94.1% (253/269)  IGHV2-70*01  30   ...........................................................G....................G.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  T  W  D  D  E  R  T  Y  N  T  S  L  Q  T  R  L  T
                    Query_11351  91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACTCATTACTTGGGATGATGAGAGAACGTACAACACATCTCTGCAGACCAGGCTCAC  180
V  94.1% (253/269)  IGHV2-70*01  120  ........................................GA............T.A.TAC....G..........A.............  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        V  S  K  D  S  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  T
                    Query_11351  181  CGTCTCTAAGGACAGCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACCTACTACTGTGCACGGAC  270
V  94.1% (253/269)  IGHV2-70*01  210  .A....C.......C.........................................................G..T.............-  298
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   
D  100.0% (5/5)     IGHD2-2*01   18   -----------------------------------------------------------------------------------------.  18

                                      -------CDR3-IMGT-------------->                                  
                                        S  A  G  D  N  H  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11351  271  CAGCGCTGGCGACAATCACTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  335
D  100.0% (5/5)     IGHD2-2*01   19   ....-------------------------------------------------------------  22
J  97.9% (47/48)    IGHJ4*02     1    -----------------............A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_300079

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD1-26*01                                                                                           14.1    9.5   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGG	TAGTGGG	CAATACAGTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCT	ARGGSGQYSAYFGS	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	69	5	0	93.2
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	106	8	0	93
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	272	21	0	92.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  I  
                    Query_11352  2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCATCTGGATACAGCTTTATCA  91
V  92.8% (272/293)  IGHV5-51*01  2    ..G..............................A....................A..............GT................C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  D  W  I  G  W  V  R  Q  K  P  G  K  G  L  D  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  
                    Query_11352  92   GTGACTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGACTGGATGGGGGTCATTTATCCTGGTGACTCTGAAACCAGATATA  181
V  92.8% (272/293)  IGHV5-51*01  92   .CT........................T..................G.........A....C.................T........C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  T  S  L  K  A  S  D  
                    Query_11352  182  GTCCGTCCTTCCAAGGCCAGGTCACCATTTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGACCAGCCTGAAGGCCTCGGACA  271
V  92.8% (272/293)  IGHV5-51*01  182  .C..........................C...................G....................G....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  I  Y  F  C  A  R  G  G  S  G  Q  Y  S  A  Y  F  G  S  W  G  Q  G  T  L  V  T  V  S  
                    Query_11352  272  CCGCCATATACTTCTGTGCGAGAGGGGGTAGTGGGCAATACAGTGCCTACTTTGGCTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  361
V  92.8% (272/293)  IGHV5-51*01  272  .......G..T.A..........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD1-26*01  5    ----------------------------.......-------------------------------------------------------  11
J  93.6% (44/47)    IGHJ4*02     2    ----------------------------------------------........A..AC...............................  45

                                         
                                      S  
                    Query_11352  362  CAG  364
J  93.6% (44/47)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_300078

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           290     2e-80
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	215	30	0	87.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  E  G  L  E 
                    Query_11353  1    ACCCTGTCCCTCACCTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGGAGGGACTGGAG  90
V  87.8% (215/245)  IGHV4-34*01  49   .......................CTA..G..G......C.................C...A.C...............A....G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_11353  91   TGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAA  180
V  87.8% (215/245)  IGHV4-34*01  139  ................A............CA.C.AC......C..T......A...............A....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W 
                    Query_11353  181  CAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCTGGCGAAGACAGCGCAACTGG  270
V  87.8% (215/245)  IGHV4-34*01  229  ..GT...........C..A......T.....................G.....C......A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (49/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------.......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11353  271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (49/50)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_226491

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           403     1e-114
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	70	1	0	98.6
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	104	10	0	91.2
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  
                    Query_11354  7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCTTGTAAGGGTTCTGGATACACCTTTACCAGCT  96
V  94.5% (274/290)  IGHV5-51*03  5    ..........................................................C...................G...........  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  
                    Query_11354  97   ACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCC  186
V  94.5% (274/290)  IGHV5-51*03  95   .........G.......................A...................................A....G.....A.........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  H  V  T  I  S  A  D  R  S  I  T  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  
                    Query_11354  187  CGTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAGGTCCATCACGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCG  276
V  94.5% (274/290)  IGHV5-51*03  185  ................G...................A........GC...........G...............A.....T.........  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------CDR3-IMGT----------------->                               
                                      A  V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_11354  277  CCGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  366
V  94.5% (274/290)  IGHV5-51*03  275  ..A.G...............----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (12/12)   IGHD6-19*01  5    -----------------------............-------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ---------------------------------------------.............................................  45

                                         
                                      S  
                    Query_11354  367  CAG  369
J  100.0% (48/48)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_265210

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11355  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_11355  91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_11355  181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_11355  271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_226496

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            310     1e-86
IGHD3-10*01                                                                                           12.2    33   
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	GGGACACCCAGAGATGGCGCAGTCAC	TTCGGG	AAGGAAGCGGTCCTCATCCCGGGGGCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGGGACACCCAGAGATGGCGCAGTCACTTCGGGAAGGAAGCGGTCCTCATCCCGGGGGCCTC	VRGHPEMAQSLREGSGPHPGGL	237	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	105	9	0	92.1
CDR3-IMGT (germline)	237	241	5	4	1	0	80
Total	N/A	N/A	230	214	16	0	93


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  A  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  N  I 
                    Query_11356  12   TGTGCAGCCTCTGGATTCACGTTTAGTGCCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGGCAACATA  101
V  93.0% (214/230)  IGHV3-7*03   64   ....................C......AG.....................................................C.......  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       K  Q  D  G  G  D  K  Y  Y  L  G  S  V  K  G  R  F  T  I  S  R  D  N  V  N  N  S  L  Y  L 
                    Query_11356  102  AAGCAAGATGGAGGTGACAAATACTATTTGGGCTCTGTGAAGGGCCGATTCACCATATCCAGAGACAACGTCAACAACTCACTGTATCTG  191
V  93.0% (214/230)  IGHV3-7*03   154  ............A....G.........G...A........................C.............C...G...............  243
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------------------------CDR3-IMGT-------
                                       Q  M  N  N  V  R  A  E  D  T  A  V  Y  Y  C  V  R  G  H  P  E  M  A  Q  S  L  R  E  G  S 
                    Query_11356  192  CAAATGAACAACGTGAGAGCCGAGGACACGGCCGTCTATTACTGCGTGAGGGGACACCCAGAGATGGCGCAGTCACTTCGGGAAGGAAGC  281
V  93.0% (214/230)  IGHV3-7*03   244  ..........G.C......................G........T.C...----------------------------------------  293
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  100.0% (6/6)     IGHD3-10*01  13   ----------------------------------------------------------------------------......--------  18

                                      -------------------->                                  
                                       G  P  H  P  G  G  L  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_11356  282  GGTCCTCATCCCGGGGGCCTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  336
J  97.1% (34/35)    IGHJ4*02     14   --------------------......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_236526

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_11357  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_11357  91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y 
                    Query_11357  181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTAC  270
V  91.4% (223/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD2-2*01   8    ---------------------------------------------------------------------........T........----  24
J  88.5% (46/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_11357  271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  318
J  88.5% (46/52)    IGHJ6*02     15   ...GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_220916

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           310     1e-86
IGHD2-21*02                                                                                           33.4    1e-05
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTCCCCAAAA	ATTGTGGTGGTGACTGC	CCCTGC	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTCCCCAAAAATTGTGGTGGTGACTGCCCCTGCGACGAC	AKDLPKNCGGDCPCDD	234	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	233	114	98	7	9	86
CDR3-IMGT (germline)	234	241	8	8	0	0	100
Total	N/A	N/A	250	226	15	9	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11358  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAAGGGCTGG  90
V  90.4% (226/250)  IGHV3-30*18  47   ..................................................................................G.......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  A  Y  D  G  G  K  K  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  K  S  
                    Query_11358  91   AGTGGGTGGCATCTATTGCATATGATGGAGGAAAAAAATACTATGCGGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAAATCC-  179
V  90.4% (226/250)  IGHV3-30*18  137  ...........GT...AT...........A.T..T...........A..........A...........................T...A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                               L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  F  C  A  K  D  L  P  K  N  C  G  
                    Query_11358  180  --------CTGTATCTGCAGATGAACAGCCTGAGACCTGAAGACACGGCTGTGTATTTCTGTGCGAAAGATCTCCCCAAAAATTGTGGTG  261
V  90.4% (226/250)  IGHV3-30*18  227  AGAACACG...........A...............G....G................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (17/17)   IGHD2-21*02  6    ---------------------------------------------------------------------------------.........  14

                                      T------------------>                                  
                                      G  D  C  P  C  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11358  262  GTGACTGCCCCTGCGACGACTGGGGTCAGGGAACCCTGGTCACCGTCTCCTCAG  315
D  100.0% (17/17)   IGHD2-21*02  15   ........----------------------------------------------  22
J  95.0% (38/40)    IGHJ4*02     9    --------------...T.......C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_150061

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           308     4e-86
IGHD3-16*02                                                                                           12.2    32   
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGT	TCGTTA	CCCAATCTTGGCCG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTTCGTTACCCAATCTTGGCCGCTACTACGGTTTGGACGTC	ARDRSLPNLGRYYGLDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	221	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  R  G  Y  Y  W  S  W  L  R  Q  S  P  G  K  G  L  E 
                    Query_11359  1    ACCCTGTCCCTCACCTGCGCTGTTTATGGCGGATCATTCAGGGGCTACTACTGGAGTTGGCTCCGCCAGTCCCCAGGGAAGGGACTGGAG  90
V  90.2% (221/245)  IGHV4-59*01  49   ..................A....C.C...T..C..CA....TA.T...........C...A....G...C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  Y  T  G  S  T  D  Y  N  P  P  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_11359  91   TGGATTGGGCATATCTATTACACTGGGAGCACCGACTACAACCCCCCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  90.2% (221/245)  IGHV4-59*01  139  .........T............G..........A...........T..........................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  S  L  P  N  L  G  R 
                    Query_11359  181  CAGTTCTCCCTGAAGTTAAATTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGATCGTTCGTTACCCAATCTTGGCCGC  270
V  90.2% (221/245)  IGHV4-59*01  229  ...............C.G.GC................................C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*02  28   ---------------------------------------------------------------------......---------------  33
J  98.1% (51/52)    IGHJ6*02     11   -----------------------------------------------------------------------------------------.  11

                                      ----------------->                                 
                                       Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11359  271  TACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  321
J  98.1% (51/52)    IGHJ6*02     12   .........A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_225948

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           330     1e-92
IGHD3-16*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCGTGCTCTTA	ATTATGATTA	TACGAGTTTTAATTGG	TACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CGTGCTCTTAATTATGATTATACGAGTTTTAATTGGTACGTTGACTTC	RALNYDYTSFNWYVDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	241	113	107	6	0	94.7
Total	N/A	N/A	241	226	15	0	93.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11360  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCATCTTCAGTAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.8% (226/241)  IGHV3-33*01  47   ....................................C........GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  R  I  D  Y  D  G  S  N  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_11360  91   AGTGGGTGGCACGTATAGACTATGATGGAAGTAATAAGTATTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGATTCCA  180
V  93.8% (226/241)  IGHV3-33*01  137  ...........GT....TGG.................A..C....C.....................................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  R  A  L  N  Y  D  Y  T  S  
                    Query_11360  181  AGAGCACCCTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTGTATTACTGCCGTGCTCTTAATTATGATTATACGAGTT  270
V  93.8% (226/241)  IGHV3-33*01  227  ...A...G........................A............................-----------------------------  287
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                
D  100.0% (10/10)   IGHD3-16*01  3    ------------------------------------------------------------------------..........--------  12

                                      T------------------>                                  
                                      F  N  W  Y  V  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11360  271  TTAATTGGTACGTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  95.7% (44/46)    IGHJ4*02     3    --------...T......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_225945

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         319     2e-89
IGHD3-22*01                                                                                           12.2    32   
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	CCTC	CTATGA	CAGAAGGGGGTTTC	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGCCTCCTATGACAGAAGGGGGTTTCATGGTTTTGATATC	ARASYDRRGFHGFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  R  S  L  T  C  A  V  S  S  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  H  P  P  G  K  G 
                    Query_11361    1    ACCCGGTCCCTCACCTGCGCTGTCTCTAGTGGCTCCATTAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCACCCCCCAGGGAAGGGC  90
V  90.8% (227/250)  IGHV4-30-4*01  49   ....T.............A........G..........C...................................G...............  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  D  N  S  G  R  T  Y  Y  S  P  A  L  K  S  R  A  F  M  S  I  D  T  S 
                    Query_11361    91   CTGGAGTGGATTGGTTACATCGATAACAGTGGGAGGACCTACTACAGCCCGGCCCTCAAGAGTCGAGCTTTCATGTCGATAGACACGTCC  180
V  90.8% (227/250)  IGHV4-30-4*01  139  ..............G......T..T..........C..........A....T...............T.AC...A..AG...........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  N  Q  F  P  L  T  L  R  S  V  T  A  A  D  T  A  K  Y  Y  C  A  R  A  S  Y  D  R  R  G 
                    Query_11361    181  AAGAACCAGTTCCCCCTGACCCTGAGGTCTGTGACTGCCGCAGACACGGCCAAGTATTACTGTGCCAGAGCCTCCTATGACAGAAGGGGG  270
V  90.8% (227/250)  IGHV4-30-4*01  229  ............T......AG.....C........................GT.................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-22*01    7    --------------------------------------------------------------------------......----------  12

                                        ----------------->                                  
                                         F  H  G  F  D  I  W  G  P  G  T  V  V  T  V  S  S  
                    Query_11361    271  TTTCATGGTTTTGATATCTGGGGCCCAGGGACAGTGGTCACCGTCTCTTCAG  322
J  93.8% (45/48)    IGHJ3*02       3    ----...C.................A.......A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_225944

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           336     1e-94
IGHD6-6*01                                                                                            23.8    0.010
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	TC	ATAGCAGCTCGT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACTCATAGCAGCTCGTACTACTTTGACTAC	TTHSSSYYFDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	128	30	30	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	235	225	10	0	95.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  N  T  W  M  S  W  V  R  Q  A  P  G  K  G  P  E  W  V  A  R  I  
                    Query_11362  13   GTGCAGCCTCTGGATTCACCTTCAGTAACACCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGGAGTGGGTCGCCCGTATTA  102
V  95.7% (225/235)  IGHV3-15*01  65   ...................T.........G.......................................T.........T.G........  154
                                         A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  

                                      -------CDR2-IMGT---------><----------------------------------------------------FR3-IMGT---
                                      K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  V  S  R  D  D  L  K  N  T  L  
                    Query_11362  103  AAAGCAAAACTGATGGTGGGACAACAGACTACGCAGCACCCGTGAAAGGCAGATTCACCGTCTCAAGAGATGATTTAAAAAACACGCTGT  192
V  95.7% (225/235)  IGHV3-15*01  155  ..................................T........................A...............C..............  244
                                      K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  

                                      -------------------------------------------------><-----------CDR3-IMGT----------->       
                                      Y  L  Q  M  N  S  L  K  I  E  D  T  A  V  Y  Y  C  T  T  H  S  S  S  Y  Y  F  D  Y  W  G  
                    Query_11362  193  ATCTGCAAATGAACAGCCTGAAAATCGAGGACACAGCCGTGTATTATTGTACCACTCATAGCAGCTCGTACTACTTTGACTACTGGGGCC  282
V  95.7% (225/235)  IGHV3-15*01  245  ........................C.....................C........-----------------------------------  299
                                      Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                                   
D  100.0% (12/12)   IGHD6-6*01   5    ---------------------------------------------------------............---------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ---------------------------------------------------------------------.....................  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_11362  283  AGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (48/48)   IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_225946

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           382     4e-108
IGHD1-1*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GGGAGGGGG	CAACTGG	GAACCCTTTAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTAC	ARGGGNWEPFTY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	288	266	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  Y
                    Query_11363  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCTA  90
V  92.4% (266/288)  IGHV5-51*01  6    .................................................................G............C......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  L  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  I  V  F  P  D  D  S  D  T  R  Y  S  P
                    Query_11363  91   CTGGCTCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGATCGTTTTTCCTGATGACTCTGATACCAGATACAGCCC  180
V  92.4% (266/288)  IGHV5-51*01  96   ....A.............C..G.........A..........G............A.C.A.....G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  I  T  I  S  A  D  K  S  I  T  T  A  F  L  Q  W  N  S  L  K  A  S  D  P  A
                    Query_11363  181  GTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCACCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACCCCGC  270
V  92.4% (266/288)  IGHV5-51*01  186  .......C.......GG...........................G........A...........G...................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  G  N  W  E  P  F  T  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11363  271  CATCTATTACTGTGCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.4% (266/288)  IGHV5-51*01  276  ...G...........G..-----------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------.......-------------------------------------------------  11
J  100.0% (38/38)   IGHJ4*02     11   ---------------------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_225941

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           445     2e-127
IGHD6-6*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	GTATAGCAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTATAGCAGCTCGTCCTTGGTCTGACTAC	ARGIAARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	287	2	0	99.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  F
                    Query_11364  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTT  90
V  99.3% (287/289)  IGHV5-51*03  6    .........................................................................................A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  L  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_11364  91   CTGGCTCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  99.3% (287/289)  IGHV5-51*03  96   ....A.....................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11364  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  99.3% (287/289)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  G  I  A  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11364  271  CATGTATTACTGTGCGAGAGGTATAGCAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  99.3% (287/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (16/16)   IGHD6-6*01   3    --------------------................-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_225943

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           357     1e-100
IGHD1-7*01                                                                                            12.2    31    
IGHJ1*01                                                                                              60.3    2e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-7*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	T	GAACTA	AACAGTCTTCAC	CACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGATGAACTAAACAGTCTTCACCAC	ATDELNSLHH	249	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	242	14	0	94.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11365  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACTTTCAGTGACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.5% (242/256)  IGHV3-15*01  47   .......T.......................A............A.............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  T  S  K  S  D  G  G  T  T  D  F  A  V  P  V  E  G  R  F  T  I  S  R  D  
                    Query_11365  91   AGTGGGTTGGCCGTATTACTAGCAAAAGTGATGGGGGGACAACAGACTTCGCTGTACCCGTGGAAGGCAGATTCACCATCTCAAGAGATG  180
V  94.5% (242/256)  IGHV3-15*01  137  ..................AA.......C......T.............A.....C.......A...........................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  A  T  D  E  L  N  S  
                    Query_11365  181  ATTCAAAGAACACGCTGTATCTGCAAATGAACAGCCTGAAAAGCGAGGACACAGCCGTGTATTATTGTGCCACAGATGAACTAAACAGTC  270
V  94.5% (242/256)  IGHV3-15*01  227  .......A..................................C.....................C...A.......--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (6/6)     IGHD1-7*01   11   -----------------------------------------------------------------------------......-------  16

                                      ------->                                  
                                      L  H  H  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_11365  271  TTCACCACTGGGGCCAGGGGACCCTGGTCGCCGTCTCCTCAG  312
J  94.6% (35/37)    IGHJ1*01     16   -----..............C.........A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_225942

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD2-2*02                                                                                            12.2    32    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCA	CTGGTATAC	TTACGTCAGCGGGGGATATG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTGGTATACTTACGTCAGCGGGGGATATGTTGACTAC	ARGHWYTYVSGGYVDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11366  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.2% (243/250)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S 
                    Query_11366  91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGCTACCATATCAGTAGACACGTCT  180
V  97.2% (243/250)  IGHV4-31*03  139  ................A.................G................................T......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  W  Y  T  Y  V 
                    Query_11366  181  AAGAACCAGTTCTCCTTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCACTGGTATACTTACGTC  270
V  97.2% (243/250)  IGHV4-31*03  229  ...............C..........C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (8/9)      IGHD2-2*02   22   --------------------------------------------------------------------------...C.....-------  30

                                      GT------------------>                                  
                                       S  G  G  Y  V  D  Y  W  D  Q  G  T  L  V  P  V  S  S  
                    Query_11366  271  AGCGGGGGATATGTTGACTACTGGGACCAGGGAACCCTGGTCCCCGTCTCCTCAG  325
J  95.2% (40/42)    IGHJ4*02     7    -------------............G................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_154544

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*04                                                                                           405     4e-115
IGHD3-3*01                                                                                            33.4    2e-05 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*04	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCCCTAAGTG	ATTACGATTTTTGGAGT	TCGGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCCCTAAGTGATTACGATTTTTGGAGTTCGGGCTGGTTCGACCCC	AKPLSDYDFWSSGWFDP	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  T  C  A  A  S  G  F  T  F  T  D  Y
                    Query_11367  1    GCAGCTGGTGCAGTCTGGAGGAGGCCTGGTACAGCCGGGGGGGTCCCTGAGACTCACCTGTGCAGCCTCTGGATTCACCTTTACCGACTA  90
V  94.8% (274/289)  IGHV3-23*04  6    ..........G.......G......T..........T..................T...........................G.AG...  95
                                        Q  L  V  E  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  S  G  S  G  G  V  T  N  Y  A  D
                    Query_11367  91   TGCCATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGGAGTGGGTCTCAGGTATTAGTGGTAGCGGTGGTGTCACAAACTACGCAGA  180
V  94.8% (274/289)  IGHV3-23*04  96   ..............................G......................C............T......AG....T..........  185
                                        A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A
                    Query_11367  181  CTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGC  270
V  94.8% (274/289)  IGHV3-23*04  186  ..........................................................................................  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        L  Y  Y  C  A  K  P  L  S  D  Y  D  F  W  S  S  G  W  F  D  P  W  G  R  G  T  L  V  T  V
                    Query_11367  271  CTTATATTACTGTGCGAAACCCCTAAGTGATTACGATTTTTGGAGTTCGGGCTGGTTCGACCCCTGGGGCCGGGGAACCCTGGTCACCGT  360
V  94.8% (274/289)  IGHV3-23*04  276  .G.................-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  K                                                                        
D  100.0% (17/17)   IGHD3-3*01   3    -----------------------------.................--------------------------------------------  19
J  97.9% (46/47)    IGHJ5*02     5    ---------------------------------------------------....................A..................  43

                                              
                                        S  S  
                    Query_11367  361  CTCCTCAG  368
J  97.9% (46/47)    IGHJ5*02     44   ........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_154546

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD5-12*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCTGCTATCGGATACTTT	GTGGCTACGATT	CGGGTGAGGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTGCTATCGGATACTTTGTGGCTACGATTCGGGTGAGGGCATGGACGTC	ARLCYRILCGYDSGEGMDV	246	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  I  R  S  T  N  F  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_11368  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGCCTCCATCAGGAGTACTAATTTCTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  95.2% (237/249)  IGHV4-39*01  50   .....TCC...A..................G.........C....G..G..A......................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_11368  94   TGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCA  183
V  95.2% (237/249)  IGHV4-39*01  140  ..........................................................................................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  D  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  C  Y  R  I  L  C  
                    Query_11368  184  AGGACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACTCTGCTATCGGATACTTTGTG  273
V  95.2% (237/249)  IGHV4-39*01  230  ..A...............A.....G............................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD5-12*01  10   ---------------------------------------------------------------------------------------...  12

                                      -IMGT----------------------->                                 
                                      G  Y  D  S  G  E  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11368  274  GCTACGATTCGGGTGAGGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  100.0% (12/12)   IGHD5-12*01  13   .........-----------------------------------------------------  21
J  100.0% (42/42)   IGHJ6*02     21   --------------------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_154547

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            319     2e-89
IGHD6-13*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTAGTAACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTAGTAACACCTGGTACTCGGGGTTTTGATTCC	AGHLVTPGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	225	21	0	91.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11369  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  91.5% (225/246)  IGHV4-4*01   49   ........................................G..GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  A  E  I  H  H  G  G  P  T  N  Y  N  P  A  L  E  S  R  V  T  I  S  V  D  K  S  N 
                    Query_11369  91   GAGTGGATAGCGGAAATCCATCATGGTGGACCCACCAACTACAACCCGGCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAC  180
V  91.5% (225/246)  IGHV4-4*01   139  ........T.G.......T.....A....GAG................T.....A..................................G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  S  L  S  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_11369  181  AACCAATTCTCCCTGAGCCTGAGCTCTCTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATCTAGTAACACCTGGTACTCGG  270
V  91.5% (225/246)  IGHV4-4*01   229  .....G..........AG.........G...........................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11369  271  GGTTTTGATTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.3% (41/43)    IGHJ4*02     6    ---.....C.A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_154540

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         427     9e-122
IGHD6-6*01                                                                                            27.6    8e-04 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGC	AGTATAGCAGCTCG	N/A	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGCAGTATAGCAGCTCGCTATTTTGACTCC	ARRSIAARYFDS	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_11370    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTA  90
V  97.2% (281/289)  IGHV5-10-1*01  6    ......................................................................................G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  N  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_11370    91   CTGGATCAACTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  97.2% (281/289)  IGHV5-10-1*01  96   ........G.................................................................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  S  I  S  A  D  M  S  I  N  T  T  Y  L  Q  W  S  S  L  R  A  S  D  T  A
                    Query_11370    181  GTCCTTCCAAGGCCACGTCAGCATCTCAGCTGACATGTCCATCAACACTACCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACACCGC  270
V  97.2% (281/289)  IGHV5-10-1*01  186  ....................C..............A........G....G........................A...............  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-------------CDR3-IMGT------------>                                
                                          I  Y  Y  C  A  R  R  S  I  A  A  R  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11370    271  CATATATTACTGTGCGAGACGCAGTATAGCAGCTCGCTATTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  351
V  97.2% (281/289)  IGHV5-10-1*01  276  ...G...............--------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                               
D  100.0% (14/14)   IGHD6-6*01     2    ----------------------..............---------------------------------------------  15
J  95.6% (43/45)    IGHJ4*02       2    ------------------------------------...C.......A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_108449

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           360     1e-101
IGHD3-22*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAC	TTACTATGATAG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAACTTACTATGATAGACTACTTTGACTAC	ARQLTMIDYFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_11371  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (239/248)  IGHV3-11*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  R  W  V  D  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11371  91   AGTGGGTTTCATACATTAGCCGTTGGGTTGATACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  96.4% (239/248)  IGHV3-11*01  137  ...................TA..A.T.G.AG...........................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  L  T  M  I  D  Y  
                    Query_11371  181  AGAACTCACTGTATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAGACAACTTACTATGATAGACTACT  270
V  96.4% (239/248)  IGHV3-11*01  227  .......................A............................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD3-22*01  4    ------------------------------------------------------------------------............------  15
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11371  271  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (48/48)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_154542

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*03                                                                                           300     8e-84
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GGACG	ATATCAGCACCTGGTA	AG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGGGACGATATCAGCACCTGGTAAGGACTAC	VRGTISAPGKDY	237	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	11	1	0	91.7
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	17	7	0	70.8
FR3-IMGT	123	236	114	105	9	0	92.1
CDR3-IMGT (germline)	237	243	7	6	1	0	85.7
Total	N/A	N/A	232	212	20	0	91.4


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  V 
                    Query_11372  12   TGTGCAGCCTCCGGATTCACCTTCAGTACCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTTTGGGTCTCACGTGTG  101
V  91.4% (212/232)  IGHV3-74*03  64   ...........T................G.............................................G............A.T  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       D  G  D  G  R  I  T  Q  Y  A  D  S  V  K  D  R  F  T  M  S  R  D  N  A  K  N  T  L  Y  L 
                    Query_11372  102  GATGGTGATGGACGTATCACACAGTACGCGGACTCCGTGAAGGACCGATTCACCATGTCCAGAGACAACGCCAAGAACACACTGTATCTG  191
V  91.4% (212/232)  IGHV3-74*03  154  A..A.......GA...G....AC....................G............C.......................G.........  243
                                       N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 

                                      --------------------------------------------><-------------CDR3-IMGT------------>         
                                       D  L  N  S  L  R  T  E  D  T  A  V  Y  Y  C  V  R  G  T  I  S  A  P  G  K  D  Y  W  G  Q 
                    Query_11372  192  GATTTGAACAGTCTGAGAACCGAGGACACGGCTGTGTATTACTGTGTAAGAGGGACGATATCAGCACCTGGTAAGGACTACTGGGGCCAG  281
V  91.4% (212/232)  IGHV3-74*03  244  C.AA..............G...........................C.....--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  87.5% (14/16)    IGHD6-13*01  5    ---------------------------------------------------------...G.....G......-----------------  20
J  100.0% (40/40)   IGHJ4*02     9    ---------------------------------------------------------------------------...............  23

                                                               
                                       G  T  L  V  T  V  S  S  
                    Query_11372  282  GGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (40/40)   IGHJ4*02     24   .........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_154543

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           358     4e-101
IGHD4-17*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGTATACCTGA	TGACTACGTTGAC	AC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGTATACCTGATGACTACGTTGACACCTTTGACCAG	AGIPDDYVDTFDQ	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	112	2	0	98.2
CDR3-IMGT (germline)	246	248	3	3	0	0	100
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_11373  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  96.7% (237/245)  IGHV4-31*03  50   .....TCC...A..............................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  L  I  G  Y  I  Y  Y  S  G  S  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_11373  94   TGGAGTTGATTGGGTACATCTATTACAGTGGGAGCGCCAACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  96.7% (237/245)  IGHV4-31*03  140  ......G............................A..T...................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  I  P  D  D  Y  V  D  
                    Query_11373  184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGGGTATACCTGATGACTACGTTGACA  273
V  96.7% (237/245)  IGHV4-31*03  230  ....................................................G............-------------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  92.3% (12/13)    IGHD4-17*01  1    ----------------------------------------------------------------------------........G....-  13

                                      ---------->                                  
                                      T  F  D  Q  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11373  274  CCTTTGACCAGTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  318
J  93.2% (41/44)    IGHJ4*02     5    -.......T.C.......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_108444

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            325     3e-91
IGHD6-13*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACCTGGTACTCGGGGTTTTGACTAC	ARHLGTPGTRGFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	22	2	3	81.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	246	229	14	3	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_11374  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  87
V  93.1% (229/246)  IGHV4-4*02   49   ...............................G.....T........GTA.......................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  S  Y  H  S  G  R  T  N  Y  N  A  S  F  Q  S  R  V  T  I  S  V  D  T  S  K 
                    Query_11374  88   GAGTGGATTGGGGAATCCTATCATAGTGGGCGCACCAACTACAACGCGTCCTTCCAGAGTCGAGTCACCATATCAGTAGACACGTCCAAG  177
V  93.1% (229/246)  IGHV4-4*02   139  ...............AT.............A..............C.....C..A...........................A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  P  G  T  R 
                    Query_11374  178  AATCAATTCTCCCTGAATCTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACCTGGTACTCGG  267
V  93.1% (229/246)  IGHV4-4*02   229  ..C..G...........G....G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11374  268  GGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (43/43)   IGHJ4*02     6    ---...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_108445

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            353     9e-100
IGHD5-12*01                                                                                           12.2    32    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	GTGGAT	GCATCACTCTGAGCGGACCCTATA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTGGATGCATCACTCTGAGCGGACCCTATATGACTGC	AREWMHHSERTLYDC	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  V  P  G  K  G  L  
                    Query_11375  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCGGGATTCACCTTTAGTAGCTATTGGATGAGCTGGGTCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-7*01   47   ............................T...........................................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  Q  V  E  N  E  R  N  Y  M  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11375  91   AGTGGGTGGCCAACATAAACCAAGTTGAAAATGAAAGAAACTATATGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-7*01   137  ...................G....A..G..G...G.A.T.....G.............................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  W  M  H  H  S  E  
                    Query_11375  181  AGAACTCACTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGAGTGGATGCATCACTCTGAGC  270
V  95.2% (238/250)  IGHV3-7*01   227  .................C..................................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD5-12*01  1    ----------------------------------------------------------------------......--------------  6

                                      ---------------->                                  
                                      R  T  L  Y  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11375  271  GGACCCTATATGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.6% (40/41)    IGHJ4*02     8    ----------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_108446

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     5e-95
IGHD6-19*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTA	GGGTATAGTAGTGGCTGGTAC	TATGACAAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTAGGGTATAGTAGTGGCTGGTACTATGACAAATTTGACTAC	AKDVGYSSGWYYDKFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11376  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCAGCCATGGCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-23*01  47   ........................................T......T...C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  G  S  G  S  I  R  E  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11376  91   AGTGGGTCTCAAGTGTTAGTGGAAGTGGTAGTATCAGAGAATACGCAGAATCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  ...........GC.A.......T......G...G..C.T.C........C........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  Y  A  K  D  V  G  Y  S  S  G  
                    Query_11376  181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTATTATGCGAAAGATGTAGGGTATAGTAGTGGCT  270
V  93.2% (233/250)  IGHV3-23*01  227  ..............C.....................................A.....C.G.........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.2% (20/21)    IGHD6-19*01  1    --------------------------------------------------------------------------........C.......  16

                                      GT-------------------->                                  
                                      W  Y  Y  D  K  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11376  271  GGTACTATGACAAATTTGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  327
D  95.2% (20/21)    IGHD6-19*01  17   .....----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    --------------....................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_108447

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           315     5e-88
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGTGTACGGAAATCAG	TATGATGGTAGTGGTTA	CCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTGTACGGAAATCAGTATGATGGTAGTGGTTACCCTGACTCC	ARGVYGNQYDGSGYPDS	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  S  A  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_11377  1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAGTGCTTACTACTGGAGTTGGGTCCGGCAGCCCCCAGGGAAGGGGCTGGAG  90
V  91.4% (222/243)  IGHV4-59*08  49   ...........................G..............AG............C...A......................A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  L  Y  Y  R  G  S  T  R  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  K 
                    Query_11377  91   TGGATTGGGAATCTGTATTACAGAGGTAGTACCAGATACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAG  180
V  91.4% (222/243)  IGHV4-59*08  139  .........T..A.C........T..G..C....AC....................................G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  E  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  Y  G  N  Q  Y  D  G 
                    Query_11377  181  CAATTCTCCCTGGAGGTGCGCTCTGTCACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGGGGTGTACGGAAATCAGTATGATGGT  270
V  91.4% (222/243)  IGHV4-59*08  229  ..G.........A..C..A.......G....................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD3-22*01  8    ---------------------------------------------------------------------------------......A..  16

                                      ----------------->                                  
                                       S  G  Y  P  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11377  271  AGTGGTTACCCTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  94.1% (16/17)    IGHD3-22*01  17   ........--------------------------------------------  24
J  97.6% (40/41)    IGHJ4*02     8    -----------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_108440

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         315     5e-88
IGHD4-17*01                                                                                           21.8    0.041
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGGGGA	ACTTCGGTGACTAC	GGGAGG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATTTGGGGAACTTCGGTGACTACGGGAGGGATGCTCTTGATATA	ARDLGNFGDYGRDALDI	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	226	25	0	90


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  V  T  S  G  A  Y  C  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_11378    1    ACCCTGTCCCTCACCTGCGCCGTCTCTGGTGGCTCCGTCACGAGTGGTGCTTACTGCTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  90.0% (226/251)  IGHV4-30-4*01  49   ..................A.T...............A...GC.......A.....A..................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  C  S  I  G  G  T  Y  Y  N  S  S  L  K  S  R  I  I  I  S  F  D  T  S 
                    Query_11378    91   CTGGAGTGGATTGGGTACATCTGTTCCATTGGGGGCACCTACTACAATTCGTCCCTCAAGAGTCGAATTATCATTTCATTTGACACGTCC  180
V  90.0% (226/251)  IGHV4-30-4*01  139  ......................A..A..G....A.............CC.................G...C...A...G.A.........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  Q  L  S  S  V  T  A  S  D  T  A  V  Y  Y  C  A  R  D  L  G  N  F  G  D 
                    Query_11378    181  AAGAACCAGTTTTCCCTGCAGTTGAGTTCTGTGACGGCCTCAGACACGGCCGTATATTACTGTGCCAGAGATTTGGGGAACTTCGGTGAC  270
V  90.0% (226/251)  IGHV4-30-4*01  229  ...........C......A..C....C........T...G.............G.................-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD4-17*01    3    -------------------------------------------------------------------------------...A.......  13

                                        MGT-------------------->                                  
                                         Y  G  R  D  A  L  D  I  W  G  Q  G  T  R  I  T  V  S  S  
                    Query_11378    271  TACGGGAGGGATGCTCTTGATATATGGGGCCAAGGGACAAGGATCACCGTCTCTTCAG  328
D  92.9% (13/14)    IGHD4-17*01    14   ...-------------------------------------------------------  16
J  91.8% (45/49)    IGHJ3*02       2    ---------......T.......C................T.G...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_108441

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           293     2e-81
IGHD1-1*01                                                                                            18.0    0.57 
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGACTAG	TGGAACGAC	TCTTGTGT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGACTAGTGGAACGACTCTTGTGTACTGGTTCGACCCC	ARTSGTTLVYWFDP	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	242	3	3	0	0	100
Total	N/A	N/A	239	213	26	0	89.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  S  G  G  S  I  N  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  Q  L  E  
                    Query_11379  4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATCAATACCTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAACAACTGGAGT  93
V  89.1% (213/239)  IGHV4-59*08  50   .....TCC...A....CA.....................G..GT...................................GGG........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  T  S  Y  S  G  S  T  T  Y  S  P  S  L  K  S  R  V  T  M  S  I  D  T  S  K  N  
                    Query_11379  94   GGATTGGTTATACCTCTTACAGTGGGAGCACCACTTATAGCCCCTCCCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCCAAGAACC  183
V  89.1% (213/239)  IGHV4-59*08  140  .......G....T..A.................AC..C.A...........................A...G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  T  S  G  T  T  L  V  Y  W  
                    Query_11379  184  AGTTCTCCCTGAGGCTGACGTCTGTGACCGCCGCAGACACGGCCATTTATTACTGTGCGCGGACTAGTGGAACGACTCTTGTGTACTGGT  273
V  89.1% (213/239)  IGHV4-59*08  230  ............A.....GC........................G.G............-------------------------------  288
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (9/9)     IGHD1-1*01   9    -------------------------------------------------------------------.........--------------  17
J  95.8% (46/48)    IGHJ5*02     4    ------------------------------------------------------------------------------------......  9

                                      ------->                                  
                                      F  D  P  W  G  Q  G  I  L  V  A  V  S  S  
                    Query_11379  274  TCGACCCCTGGGGCCAGGGAATCCTGGTCGCCGTCTCCTCAG  315
J  95.8% (46/48)    IGHJ5*02     10   .....................C.......A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_108442

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            329     3e-92
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCTA	TATTACTATGAAAGTAGTGGTT	CAT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCTATATTACTATGAAAGTAGTGGTTCATACTTCTTTGACTAC	ARSLYYYESSGSYFFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	228	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  D  S  I  S  N  S  R  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11380  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCATCAGTAATTCTAGGTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  92.7% (228/246)  IGHV4-4*02   49   ...............................G.........C.G.AG..AC...................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  H  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  K  S  K 
                    Query_11380  91   GAGTGGATTGGAGACATCCATCATAGTGGGACCACCAACTACAATCCGTCCCTCAAGAGTCGAGTCACCCTCTCAGTAGACAAGTCCAAG  180
V  92.7% (228/246)  IGHV4-4*02   139  ...........G..A...T............G............C........................A.A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       K  R  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  Y  E  S  S 
                    Query_11380  181  AAGCGGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAAGCCTATATTACTATGAAAGTAGT  270
V  92.7% (228/246)  IGHV4-4*02   229  ..C.A.................G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  95.5% (21/22)    IGHD3-22*01  2    ------------------------------------------------------------------------...........T......  19

                                      -------------------->                                  
                                       G  S  Y  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11380  271  GGTTCATACTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  95.5% (21/22)    IGHD3-22*01  20   ....---------------------------------------------------  23
J  97.9% (47/48)    IGHJ4*02     1    -------...A............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_108443

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*11                                                                                           392     2e-111
IGHD2-2*01                                                                                            18.0    0.69  
IGHJ5*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*11	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCCACCCGCTGTTGTACTTC	TACCAACTGCTA	CAGGGGGGA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCCACCCGCTGTTGTACTTCTACCAACTGCTACAGGGGGGAACAACTGGTTCGCCCCC	ARGPPAVVLLPTATGGNNWFAP	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  D  T  F  S  S  Y 
                    Query_11381  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGTAAGGCTTCTGGAGACACCTTCAGCAGCTAT  91
V  93.4% (270/289)  IGHV1-69*11  7    .................G...............................A.........C.............G................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  L  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  T  I  I  P  V  L  G  T  A  N  Y  A  Q 
                    Query_11381  92   GGTCTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTGGAGTGGATGGGAACCATCATCCCTGTCCTTGGTACAGCGAACTACGCACAG  181
V  93.4% (270/289)  IGHV1-69*11  97   .C.A..................................T.............GG.........A.............A............  186
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  T  A  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  F  Q  G  R  L  T  M  T  A  D  V  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_11381  182  AGGTTCCAGGGCAGACTCACGATGACCGCGGACGTTTCCACGAGCACAGCCTACATGGAGCTGAGAAGCCTAAGATCTGACGACACGGCC  271
V  93.4% (270/289)  IGHV1-69*11  187  .A.............G.......T..........AA.............................C.....G........G.........  276
                                       K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><----------------------------CDR3-IMGT--------------------------->            
                                       V  Y  Y  C  A  R  G  P  P  A  V  V  L  L  P  T  A  T  G  G  N  N  W  F  A  P  W  G  Q  G 
                    Query_11381  272  GTGTATTACTGTGCGAGAGGTCCACCCGCTGTTGTACTTCTACCAACTGCTACAGGGGGGAACAACTGGTTCGCCCCCTGGGGCCAGGGA  361
V  93.4% (270/289)  IGHV1-69*11  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  91.7% (11/12)    IGHD2-2*01   16   ----------------------------------------.....G......--------------------------------------  27
J  98.0% (50/51)    IGHJ5*02     1    -------------------------------------------------------------............A................  29

                                                            
                                       T  L  V  T  V  S  S  
                    Query_11381  362  ACCCTGGTCACCGTCTCCTCAG  383
J  98.0% (50/51)    IGHJ5*02     30   ......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_50948

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            333     1e-93
IGHD3-3*02                                                                                            12.2    31   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTT	GCATTT	CGATCTCCCACGAGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGCATTTCGATCTCCCACGAGGCATGGACGTC	ARLHFDLPRGMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  T  Y  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_11382  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGGGGCTCCATCACCAGTACTTACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  93.5% (229/245)  IGHV4-4*01   49   ..................G....C.....T..........G.....G.A.........G...........................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  P  H  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_11382  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCCCCCACTACAGTCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  93.5% (229/245)  IGHV4-4*01   139  .................................A..A......AC.............................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  W  C  A  R  L  H  F  D  L  P  R  G 
                    Query_11382  181  AACCAGTTCTCCCTGAAGTTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTGGTGTGCGAGGTTGCATTTCGATCTCCCACGAGGC  270
V  93.5% (229/245)  IGHV4-4*01   229  ..................C....C.............................T..C........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  100.0% (6/6)     IGHD3-3*02   7    --------------------------------------------------------------------......----------------  12

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  A  I  V  S  S 
                    Query_11382  271  ATGGACGTCTGGGGCCAAGGGACCACGGCCATCGTCTCCTCA  312
J  95.2% (40/42)    IGHJ6*02     21   ............................T..C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_46806

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           433     1e-123
IGHD3-16*02                                                                                           10.3    135   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TCGTT	GAGGGATCACCAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTTGAGGGATCACCAACCGTTCTACTTTGACTAC	ARSLRDHQPFYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  G  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_11383  1    GCAGCTGGTGCAGTCTGGAGCAGGGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  97.9% (283/289)  IGHV5-51*01  6    .......................A..........................A..........................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_11383  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  97.9% (283/289)  IGHV5-51*01  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11383  181  GTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACTGC  270
V  97.9% (283/289)  IGHV5-51*01  186  ......................A................................................................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  S  L  R  D  H  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_11383  271  CATGTATTACTGTGCGAGATCGTTGAGGGATCACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  359
V  97.9% (283/289)  IGHV5-51*01  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (5/5)     IGHD3-16*02  28   -------------------.....-----------------------------------------------------------------  32
J  97.9% (46/47)    IGHJ4*02     2    ------------------------------------------....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_234319

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           248     7e-68
IGHD3-22*01                                                                                           23.8    0.011
IGHJ2*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CC	ATGATAGTAGTG	ACGACCACAATGGGTAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCATGATAGTAGTGACGACCACAATGGGTATTACTTCGAGATC	ARDHDSSDDHNGYYFEI	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR2-IMGT	56	104	49	44	5	0	89.8
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	192	175	17	0	91.1


Alignments

                                      <-------------------FR2-IMGT--------------------><-----CDR2-IMGT-----><-------------------
                                        R  W  V  R  Q  R  P  G  K  G  L  E  W  I  G  N  I  S  Y  S  A  S  T  Q  Y  N  P  S  L  K
                    Query_11384  56   GAGGTGGGTCCGCCAGCGCCCAGGGAAGGGCCTAGAGTGGATTGGGAACATCTCTTACAGTGCGAGCACCCAGTACAACCCGTCCCTCAA  145
V  91.1% (175/192)  IGHV4-31*02  108  ...C...A.........A...............G............T......A........G.......T.C.................  197
                                        S  W  I  R  Q  H  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K

                                      ---------------------------------FR3-IMGT-------------------------------------------------
                                        G  R  V  T  I  S  A  D  T  S  K  N  Q  F  S  L  K  L  N  S  M  T  A  A  D  T  A  V  Y  Y
                    Query_11384  146  GGGTCGAGTTACCATATCAGCAGACACGTCTAAGAATCAGTTCTCCCTGAAACTGAACTCCATGACTGCCGCGGACACGGCCGTCTATTA  235
V  91.1% (175/192)  IGHV4-31*02  198  .A..................T...............C..............G....G...TG......................G.....  287
                                        S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y

                                      ---><--------------------CDR3-IMGT-------------------->                                  
                                        C  A  R  D  H  D  S  S  D  D  H  N  G  Y  Y  F  E  I  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11384  236  CTGTGCGAGAGACCATGATAGTAGTGACGACCACAATGGGTATTACTTCGAGATCTGGGGCCGTGGCACCCTGGTCACCGTCTCCTCAG  324
V  91.1% (175/192)  IGHV4-31*02  288  ............-----------------------------------------------------------------------------  299
                                        C  A  R                                                                                
D  100.0% (12/12)   IGHD3-22*01  9    --------------............---------------------------------------------------------------  20
J  93.5% (43/46)    IGHJ2*01     8    -------------------------------------------........TC.........................T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_46808

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD3-16*01                                                                                           10.3    115   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGAAAGA	GGGGG	CTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC	ARDQKEGAPDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	241	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11385  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (241/245)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11385  91   TGGATTGGGTATATCTTTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (241/245)  IGHV4-59*01  139  ................A.........................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  K  E  G  A  P  D  Y 
                    Query_11385  181  CAATTCTCCCTGAAACTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC  270
V  98.4% (241/245)  IGHV4-59*01  229  ..G...........G..................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   --------------------------------------------------------------------------.....-----------  22
J  100.0% (41/41)   IGHJ4*02     8    -----------------------------------------------------------------------------------.......  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11385  271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (41/41)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_211843

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           377     1e-106
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	ARPSSASGWHFDN	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	265	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_11386  1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCAGTTA  90
V  91.7% (265/289)  IGHV5-51*03  6    .........................G.............G.........................G.........C.GC..T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  D  I  R  Y  S  P
                    Query_11386  91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGATATTAGATATAGTCC  180
V  91.7% (265/289)  IGHV5-51*03  96   C.......G..................................................AT...GG...........CC.....C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  G
                    Query_11386  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGG  270
V  91.7% (265/289)  IGHV5-51*03  186  .............................C..A.AA........G............................................C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11386  271  CATGTATTACTGTGCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  91.7% (265/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_234317

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD2-21*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGAAG	GATTCCTATT	TTTTGGGGAATCGTCATCTC	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGAAGGATTCCTATTTTTTGGGGAATCGTCATCTCACGGTATGGACGTC	ARQEGFLFFGESSSHGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  T  F  T  K  Y
                    Query_11387  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGGTCTGGATACACCTTTACCAAATA  90
V  95.5% (278/291)  IGHV5-51*01  6    ....................................C........................A....T..........G........GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  S  P  G  D  S  N  T  R  Y  S  P
                    Query_11387  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGCAAAGGCCTGGAGTGGATGGGAATCATCTCTCCTGGTGACTCTAATACCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ..............................G....................G.......A.............G................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  V  K  A  S  D  S  A
                    Query_11387  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCGTGAAGGCCTCGGACAGCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  ............................................G.........................C...............C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  Q  E  G  F  L  F  F  G  E  S  S  S  H  G  M  D  V  W  G  Q  G  T  T  V
                    Query_11387  271  CATGTATTACTGTGCGAGACAAGAAGGATTCCTATTTTTTGGGGAATCGTCATCTCACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  90.0% (9/10)     IGHD2-21*01  17   --------------------------....G.....------------------------------------------------------  26
J  100.0% (47/47)   IGHJ6*02     16   --------------------------------------------------------..................................  49

                                                   
                                        T  V  S  S 
                    Query_11387  361  CACCGTCTCCTCA  373
J  100.0% (47/47)   IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_234359

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*02                                                                                            382     4e-108
IGHD1-26*01                                                                                           14.1    9.0   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*02	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	CAGCCTTGACGG	AGTGGGA	ACTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGACCAGCCTTGACGGAGTGGGAACTTTACTTTGACTAC	AHRPALTEWELYFDY	263	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	44	2	0	95.7
CDR1-IMGT	47	76	30	30	0	0	100
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	105	9	0	92.1
CDR3-IMGT (germline)	263	272	10	10	0	0	100
Total	N/A	N/A	272	258	14	0	94.9


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  V  R
                    Query_11388  1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACGTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGGTCCG  90
V  94.9% (258/272)  IGHV2-5*02   30   ...........................G...........C.............................................A....  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  S  P  G  R  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  L  T
                    Query_11388  91   TCAGTCCCCAGGAAGGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGATGATAAGCGTTACAGCCCATCTCTGAAGAGCAGACTCAC  180
V  94.9% (258/272)  IGHV2-5*02   120  ....C.........A.............................................C.......................G.....  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  T  K  D  T  N  K  N  Q  V  I  L  K  M  T  N  M  E  P  V  D  T  A  T  Y  Y  C  A  H  R
                    Query_11388  181  CATCACCAAGGACACTAACAAAAACCAGGTGATCCTTAAAATGACCAACATGGAGCCTGTGGACACAGCCACATACTACTGTGCACACAG  270
V  94.9% (258/272)  IGHV2-5*02   210  ...............CTC.............G......C...............C....................T..............  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  R

                                      ----------CDR3-IMGT----------------->                                
                                        P  A  L  T  E  W  E  L  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11388  271  ACCAGCCTTGACGGAGTGGGAACTTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  339
V  94.9% (258/272)  IGHV2-5*02   300  ..-------------------------------------------------------------------  301
                                                                                                           
D  100.0% (7/7)     IGHD1-26*01  6    --------------.......------------------------------------------------  12
J  100.0% (44/44)   IGHJ4*02     3    -------------------------............................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_234350

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.043
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11389  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11389  91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_11389  181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11389  271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_234356

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           347     8e-98
IGHD4-4*01                                                                                            16.1    2.4  
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATCAGC	CAGTAACT	TCACTCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCAGCCAGTAACTTCACTCGGCTAC	ARNQPVTSLGY	281	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	166	21	14	7	0	66.7
FR3-IMGT	167	280	114	99	15	0	86.8
CDR3-IMGT (germline)	281	286	6	6	0	0	100
Total	N/A	N/A	286	254	32	0	88.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  V  T  V  S  N  N
                    Query_11390  1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGGTCACCGTCAGTAACAA  90
V  88.8% (254/286)  IGHV3-53*01  6    ..........G..............................................................T............G...  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  T  R  V  R  Q  D  P  G  K  G  L  E  W  L  S  V  M  Y  G  R  G  A  T  R  Y  A  D  S
                    Query_11390  91   CTATATGACGAGGGTCCGCCAGGATCCAGGGAAGGGGCTGGAGTGGCTCTCAGTCATGTATGGTCGTGGAGCCACAAGGTACGCAGACTC  180
V  88.8% (254/286)  IGHV3-53*01  96   ...C....GCT............C......................G.......T..T...A.CG....TAG....TAC...........  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        G  R  G  R  F  T  I  S  R  D  S  A  K  N  T  V  Y  L  Q  M  K  N  L  R  V  Q  D  T  A  I
                    Query_11390  181  CGGGAGGGGCCGATTCACCATCTCCAGAGACAGTGCCAAGAACACGGTGTATCTTCAAATGAAAAACCTGAGAGTCCAGGACACGGCCAT  270
V  88.8% (254/286)  IGHV3-53*01  186  ..T..A..........................A.T...........C................C.G........C.G...........G.  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><-----------CDR3-IMGT----------->                                  
                                        Y  S  C  A  R  N  Q  P  V  T  S  L  G  Y  W  G  P  G  T  L  F  T  V  S  S  
                    Query_11390  271  CTATTCCTGTGCGAGAAATCAGCCAGTAACTTCACTCGGCTACTGGGGCCCGGGAACCCTGTTCACCGTCTCCTCAG  347
V  88.8% (254/286)  IGHV3-53*01  276  G....A..........-------------------------------------------------------------  291
                                        Y  Y  C  A  R                                                              
D  100.0% (8/8)     IGHD4-4*01   7    -----------------------........----------------------------------------------  14
J  94.7% (36/38)    IGHJ4*02     11   ---------------------------------------...........A..........G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_234357

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           296     2e-82
IGHD1-26*01                                                                                           10.3    112  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	CCCCA	TGGGA	CT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACCCCATGGGACTCTTTGACTAC	RTPWDSLTT	239	265	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	29	28	0	1	96.6
CDR1-IMGT	29	52	24	21	3	0	87.5
FR2-IMGT	53	103	51	47	4	0	92.2
CDR2-IMGT	104	124	24	17	4	3	70.8
FR3-IMGT	125	238	114	104	10	0	91.2
CDR3-IMGT (germline)	239	243	5	5	0	0	100
Total	N/A	N/A	247	222	21	4	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L   D  S  P  V  Q  P  L  A  S  P  L  A  T  M  P  *  A  G  S  A  R  L  R  G  G  G  W 
                    Query_11391  1    GGTCCCT-AGACTCTCCTGTGCAGCCTCTGGCTTCACCTTTAGCGACTATGCCATGAGCTGGGTCCGCCAGACTCCGGGGAGGGGGCTGG  89
V  89.9% (222/247)  IGHV3-23*01  47   .......G.......................A............AG.........................G....A....A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       S  G  S  H  L  S  V  T  V  V  L     H  S  T  R  T  P  *  R  A  G  S  P  S  P  E  T  I  R 
                    Query_11391  90   AGTGGGTCTCATCTATCAGTGACAGTGGTGCTA---CATTCTACGCGGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCGA  176
V  89.9% (222/247)  IGHV3-23*01  137  ...........G....T....GT.......G..GCA...A......A.........................................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                       R  I  H  C  I  C  K  *  T  T  *  D  S  R  T  R  P  S  I  T  V  R  T  P  W  D  S  L  T  T 
                    Query_11391  177  AGAATACACTGTATCTGCAAATGAACAACCTGAGACTCGAGGACACGGCCATCTATTACTGTGCGAACCCCATGGGACTCTTTGACTACT  266
V  89.9% (222/247)  IGHV3-23*01  227  ....C..G...................G.......GC.............G.A..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD1-26*01  8    ------------------------------------------------------------------------.....-------------  12
J  97.7% (43/44)    IGHJ4*02     5    -------------------------------------------------------------------------------...........  15

                                                                       
                                       G  A  R  E  P  W  S  P  S  P  Q 
                    Query_11391  267  GGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  299
J  97.7% (43/44)    IGHJ4*02     16   ....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_234354

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           367     6e-104
IGHD2-15*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CCTAAGTGGGGGGAGGGGCCC	GTGGTAGCTGC	CCCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCCTAAGTGGGGGGAGGGGCCCGTGGTAGCTGCCCCTCTTGACTAC	APKWGEGPVVAAPLDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	240	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  Y  S  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_11392  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTCACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  98.0% (240/245)  IGHV3-21*01  47   ............................................AG...................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11392  91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.0% (240/245)  IGHV3-21*01  137  ..........................................................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  P  K  W  G  E  G  P  V  
                    Query_11392  181  AGAGCTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGCCTAAGTGGGGGGAGGGGCCCGTGG  270
V  98.0% (240/245)  IGHV3-21*01  227  ...A................................................G............-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD2-15*01  15   --------------------------------------------------------------------------------------....  18

                                      T------------------>                                  
                                      V  A  A  P  L  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_11392  271  TAGCTGCCCCTCTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  324
D  100.0% (11/11)   IGHD2-15*01  19   .......-----------------------------------------------  25
J  97.6% (41/42)    IGHJ4*02     7    ------------.............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_234355

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           276     3e-76
IGHD2-8*02                                                                                            16.1    2.2  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGCATCGCAGAA	GGTGGTGT	GAAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGCATCGCAGAAGGTGGTGTGAATTGGTTCGACCCC	AKDGIAEGGVNWFDP	239	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	18	6	0	75
FR2-IMGT	50	100	51	46	5	0	90.2
CDR2-IMGT	101	124	24	21	3	0	87.5
FR3-IMGT	125	238	114	100	14	0	87.7
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	232	204	28	0	87.9


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  Q  F  S  F  Y  A  M  N  W  I  R  Q  A  P  G  K  G  L  Q  W  V  S  G  I  
                    Query_11393  15   GTGCAGCCTCTGGATTCCAGTTTAGTTTCTATGCCATGAACTGGATCCGCCAGGCTCCAGGGAAGGGGCTGCAGTGGGTCTCAGGCATTA  104
V  87.9% (204/232)  IGHV3-23*01  65   .................ACC.....CAG...........G....G..........................G............CT....  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  N  I  T  R  D  N  S  G  N  T  V  F  L  
                    Query_11393  105  GTGGAAGTGGTGGTACCACTTACTACGCAGACTCCGTGAAGGGCCGCTTCAACATTACCAGAGACAATTCTGGGAACACGGTGTTTCTTC  194
V  87.9% (204/232)  IGHV3-23*01  155  ....T..........G...A..........................G....C...CT.............CAA.......C...A...G.  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  D  G  I  A  E  G  G  V  N  W  F  D  P  
                    Query_11393  195  AAATGAACAGCCTGAGAGTCGAGGACACGGCCGTGTACTATTGTGCGAAAGATGGCATCGCAGAAGGTGGTGTGAATTGGTTCGACCCCT  284
V  87.9% (204/232)  IGHV3-23*01  245  ..................C...............A..T..C...........--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (8/8)     IGHD2-8*02   14   -----------------------------------------------------------------........-----------------  21
J  97.8% (45/46)    IGHJ5*02     6    -----------------------------------------------------------------------------.............  18

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11393  285  GGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  317
J  97.8% (45/46)    IGHJ5*02     19   ............................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_97523

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           310     1e-86
IGHD2-8*02                                                                                            19.9    0.16 
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-8*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCGGGAC	TTGTACTGGT	TACACCTGCTACGACGCTC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCGGGACTTGTACTGGTTACACCTGCTACGACGCTCCTTTTGATATC	ARDPGTCTGYTCYDAPFDI	235	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	18	6	0	75
FR2-IMGT	49	99	51	49	2	0	96.1
CDR2-IMGT	100	120	21	16	5	0	76.2
FR3-IMGT	121	234	114	111	3	0	97.4
CDR3-IMGT (germline)	235	242	8	8	0	0	100
Total	N/A	N/A	230	214	16	0	93


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  I  L 
                    Query_11394  13   TGTGCAGCCTCTGGATTCACCTTCAGTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTGAGTGGGTCTCAATTCTT  102
V  93.0% (214/230)  IGHV3-53*01  64   ..............G......G........A.C.AC...................................G............G..A..  153
                                       C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I 

                                      ---CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-----------
                                       Y  S  G  G  Y  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 
                    Query_11394  103  TATAGTGGTGGTTATACATACTACGCAGACTCCGTGAGAGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACCCTGTATCTTCAA  192
V  93.0% (214/230)  IGHV3-53*01  154  .....C......AGC......................AG......................................G............  243
                                       Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 

                                      -----------------------------------------><-----------------------CDR3-IMGT---------------
                                       M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  G  T  C  T  G  Y  T  C  Y  D  A  P 
                    Query_11394  193  ATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGATCCCGGGACTTGTACTGGTTACACCTGCTACGACGCTCCT  282
V  93.0% (214/230)  IGHV3-53*01  244  ..................................................----------------------------------------  293
                                       M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                           
D  100.0% (10/10)   IGHD2-8*02   7    -----------------------------------------------------------..........---------------------  16
J  97.8% (44/45)    IGHJ3*02     6    ----------------------------------------------------------------------------------------..  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11394  283  TTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCGTCAG  325
J  97.8% (44/45)    IGHJ3*02     8    ......................................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_149899

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*11                                                                                           392     2e-111
IGHD2-2*01                                                                                            18.0    0.69  
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*11	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCCACCCGCTGTTGTACTTC	TACCAACTGCTA	CAGGGGGGA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCCACCCGCTGTTGTACTTCTACCAACTGCTACAGGGGGGAACAACTGGTTCGACCCC	ARGPPAVVLLPTATGGNNWFDP	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  D  T  F  S  S  Y 
                    Query_11395  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGTAAGGCTTCTGGAGACACCTTCAGCAGCTAT  91
V  93.4% (270/289)  IGHV1-69*11  7    .................G...............................A.........C.............G................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  L  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  T  I  I  P  V  L  G  T  A  N  Y  A  Q 
                    Query_11395  92   GGTCTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTGGAGTGGATGGGAACCATCATCCCTGTCCTTGGTACAGCGAACTACGCACAG  181
V  93.4% (270/289)  IGHV1-69*11  97   .C.A..................................T.............GG.........A.............A............  186
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  T  A  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  F  Q  G  R  L  T  M  T  A  D  V  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_11395  182  AGGTTCCAGGGCAGACTCACGATGACCGCGGACGTTTCCACGAGCACAGCCTACATGGAGCTGAGAAGCCTAAGATCTGACGACACGGCC  271
V  93.4% (270/289)  IGHV1-69*11  187  .A.............G.......T..........AA.............................C.....G........G.........  276
                                       K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><----------------------------CDR3-IMGT--------------------------->            
                                       V  Y  Y  C  A  R  G  P  P  A  V  V  L  L  P  T  A  T  G  G  N  N  W  F  D  P  W  G  Q  G 
                    Query_11395  272  GTGTATTACTGTGCGAGAGGTCCACCCGCTGTTGTACTTCTACCAACTGCTACAGGGGGGAACAACTGGTTCGACCCCTGGGGCCAGGGA  361
V  93.4% (270/289)  IGHV1-69*11  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  91.7% (11/12)    IGHD2-2*01   16   ----------------------------------------.....G......--------------------------------------  27
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------.............................  29

                                                            
                                       T  L  V  T  V  S  S  
                    Query_11395  362  ACCCTGGTCACCGTCTCCTCAG  383
J  100.0% (51/51)   IGHJ5*02     30   ......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_140313

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     9e-100
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATCGTGGTG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATCGTGGTGACTACTTTGACCAC	ARGLHYYDRGDYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  R  V  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11396  1    ACCCTGTCCCTCACCTGCACTGTCTCTCGTGTCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.2% (238/250)  IGHV4-31*03  49   ...........................G...G...................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_11396  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAATAAGTCCCTCAAGAGTCGAATTACCATATCGGTAGACACGTCT  180
V  95.2% (238/250)  IGHV4-31*03  139  ..................................G............CCC................G..........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R 
                    Query_11396  181  AAGAACCAGTTCTCCCTGACGCTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCCATTACTATGATCGT  270
V  95.2% (238/250)  IGHV4-31*03  229  ...................A.....G...........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (16/18)    IGHD3-22*01  3    ----------------------------------------------------------------------------...........A..  16

                                      ----------------->                                  
                                       G  D  Y  F  D  H  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_11396  271  GGTGACTACTTTGACCACTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  322
D  88.9% (16/18)    IGHD3-22*01  17   A...------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    ----...........T....................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_149890

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           389     2e-110
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGAGCG	GCACTGGCTGGTA	TTTGGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGAGCGGCACTGGCTGGTATTTGGCCTAC	ARGSGTGWYLAY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  M  F  T  T  Y 
                    Query_11397  2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCCAGGCTTCTGGTTACATGTTTACCACTTAC  91
V  93.1% (269/289)  IGHV1-18*04  7    ...................C........................................A...............CC.......GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  G  Y  N  G  N  T  K  Y  A  Q 
                    Query_11397  92   GGCATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGCTGGGATGGATCAGCGGCTACAATGGTAACACAAAGTATGCACAG  181
V  93.1% (269/289)  IGHV1-18*04  97   ..T..........................................A...............CT.................C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  D  R  V  T  L  T  I  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_11397  182  AACCTCCAGGACAGAGTCACCCTGACCATAGACACATCTACGAGCACTGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  93.1% (269/289)  IGHV1-18*04  187  ..G.......G..........A......C.........C........A.....C....................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  G  S  G  T  G  W  Y  L  A  Y  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_11397  272  GTCTATTACTGTGCGCGAGGGAGCGGCACTGGCTGGTATTTGGCCTACTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  353
V  93.1% (269/289)  IGHV1-18*04  277  ..G............A...---------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                 
D  92.3% (12/13)    IGHD6-19*01  8    -------------------------...G.........--------------------------------------------  20
J  97.4% (37/38)    IGHJ4*02     11   --------------------------------------------......................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_149891

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           343     2e-96
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCG	ACGGTGAC	ACCGAGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACGGTGACACCGAGAATGACTAC	AADGDTENDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  S  F  G  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_11398  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGACTCACCTTCAGTAGCTTTGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGG  90
V  94.7% (232/245)  IGHV3-33*01  47   ................................T...............A......................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  K  K  Y  Y  T  D  S  V  K  G  R  F  I  I  S  R  D  N  S  
                    Query_11398  91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAAGAAATACTATACAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCA  180
V  94.7% (232/245)  IGHV3-33*01  137  ..................................T.........G........................C....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  F  C  A  A  D  G  D  T  E  N  D  
                    Query_11398  181  AGAATACGTTGTATCTGCAGATGAACAGCCTGAGAGTCGACGACACGGCTGTCTATTTCTGTGCGGCCGACGGTGACACCGAGAATGACT  270
V  94.7% (232/245)  IGHV3-33*01  227  ....C...C..........A................C...G...........G....A.......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD4-17*01  6    ---------------------------------------------------------------------........-------------  13
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11398  271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_149892

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           304     9e-85
IGHD1-7*01                                                                                            12.2    31   
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TTCATGGC	AACTAC	CCCAGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATTCATGGCAACTACCCCAGGGCTTTGACTAC	AKDSWQLPQGFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  N  D  Y  A  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_11399  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAACGATTATGCCATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  88.8% (222/250)  IGHV3-23*01  47   .....................C....................G.AGC.........A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  M  S  S  T  G  G  V  R  Y  Y  A  D  S  V  K  G  R  F  T  I  N  R  D  N  P  
                    Query_11399  91   AGTGGGTCTCCAGTATGAGCAGTACTGGAGGTGTCAGATATTACGCCGACTCCGTGAAGGGCCGGTTCACCATCAACAGAGACAATCCCA  180
V  88.8% (222/250)  IGHV3-23*01  137  ..........AGC...T..TG...G...T...AG..C...C.....A...........................TC..........T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  R  L  R  A  E  D  T  A  L  Y  F  C  A  K  D  S  W  Q  L  P  Q  
                    Query_11399  181  AGAACACGCTGTATTTGCAAATGAACCGCCTGAGAGCCGAGGACACGGCCCTATACTTCTGTGCGAAGGATTCATGGCAACTACCCCAGG  270
V  88.8% (222/250)  IGHV3-23*01  227  ..............C...........A.......................G....T.A.........A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-7*01   12   ------------------------------------------------------------------------------......------  17

                                      ---------->                                  
                                      G  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_11399  271  GCTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  315
J  97.7% (43/44)    IGHJ4*02     5    -.......................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_149893

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11400  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ........................................G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_11400  91   TGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ........G...A..T...............................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y 
                    Query_11400  181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............C....C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11400  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_149894

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           335     4e-94
IGHD3-16*01                                                                                           16.1    2.5  
IGHJ3*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCCACGATACTC	ATGCTTAT	TTTGGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCCACGATACTCATGCTTATTTTGGGGCTTTTGATATC	AGHDTHAYFGAFDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	250	36	0	87.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  T  C  K  A  S  G  V  T  F  S  S  F
                    Query_11401  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAGGGTCACCTGCAAGGCTTCTGGAGTCACGTTCAGTAGTTT  90
V  87.4% (250/286)  IGHV1-69*06  6    ..................G...............................A....T..................G...C.....C..C.A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  R  W  V  R  Q  T  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  L  N  T  P  N  Y  A  Q
                    Query_11401  91   TGCTGTTAGATGGGTGCGCCAGACCCCTGGACAAGGGCTCGAGTGGATGGGAGGGATCATCCCCATCCTCAATACGCCAAACTACGCACA  180
V  87.4% (250/286)  IGHV1-69*06  96   ....A.C..C........A...G................T.......................T...T.TGG...AG.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  H  G  R  V  T  I  S  A  D  K  S  T  T  T  V  Y  L  E  L  R  G  L  G  S  H  D  T  A
                    Query_11401  181  GAAGTTCCACGGCAGAGTCACGATTAGCGCGGACAAGTCCACGACCACAGTCTACCTGGAGTTGAGAGGTCTGGGATCTCACGACACGGC  270
V  87.4% (250/286)  IGHV1-69*06  186  .........G................C.........A.......G.....C....A.....C....CA.C...A.....G.G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  G  H  D  T  H  A  Y  F  G  A  F  D  I  W  G  P  G  T  R  V  T  V  S  S  
                    Query_11401  271  CGTATATTATTGTGCGGGCCACGATACTCATGCTTATTTTGGGGCTTTTGATATCTGGGGCCCAGGGACAAGGGTCACCGTCTCTTCAG  359
V  87.4% (250/286)  IGHV1-69*06  276  ...G.....C......-------------------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                          
D  100.0% (8/8)     IGHD3-16*01  27   -----------------------------........----------------------------------------------------  34
J  95.7% (44/46)    IGHJ3*02     5    -------------------------------------------...................A........T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_149895

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           388     5e-110
IGHD3-3*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              56.4    4e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	GGAGAGTCTG	CGATTTCTGGAGTGGTTAT	CCCCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTAC	AREESLRFLEWLSPDY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  L  T  R  Y 
                    Query_11402  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTAAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTGACCAGATAT  91
V  92.8% (269/290)  IGHV1-18*01  7    ...............................................G.................T..............T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  M  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  S  N  I  N  Y  A  Q 
                    Query_11402  92   AGTATGTCTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATAGCAACATAAATTATGCACAG  181
V  92.8% (269/290)  IGHV1-18*01  97   G....CAGC....................................................C.......G.T....C...C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  L  G  R  V  T  M  T  I  D  T  S  A  N  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_11402  182  AAACTCCTGGGCAGAGTCACCATGACCATAGACACATCCGCGAACACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.8% (269/290)  IGHV1-18*01  187  ..G....A....................C..........A...G..............................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                             
                                       V  Y  Y  C  A  R  E  E  S  L  R  F  L  E  W  L  S  P  D  Y  W  G  Q  G  T  P  V  I  V  S
                    Query_11402  272  GTGTATTATTGTGCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTACTGGGGCCAGGGAACCCCGGTCATCGTCTC  360
V  92.8% (269/290)  IGHV1-18*01  277  ........C........A..---------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-3*01   7    ------------------------------......T............----------------------------------------  25
J  94.3% (33/35)    IGHJ4*02     9    ------------------------------------------------------......................T.....C......  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_149896

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           308     4e-86
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	239	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	16	8	0	66.7
FR3-IMGT	125	238	114	106	8	0	93
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	233	215	18	0	92.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 
                    Query_11403  14   TGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATT  103
V  92.3% (215/233)  IGHV3-21*01  64   ...........................AG.............................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  K  K  S  V  F  L 
                    Query_11403  104  AGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCAAGAAGTCAGTGTTTCTG  193
V  92.3% (215/233)  IGHV3-21*01  154  ...AG.AG..G..G.T....A........A.......................................G.......C...C...A....  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------------------CDR3-IMGT-------------
                                       Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  R  A  R  E  S  F  L  D  S  S  G  Y  P  L  D  G 
                    Query_11403  194  CAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACCGTGCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGT  283
V  92.3% (215/233)  IGHV3-21*01  244  .......................G...........G......T..........-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (15/15)   IGHD3-22*01  11   ---------------------------------------------------------------...............------------  25
J  100.0% (47/47)   IGHJ6*02     16   -------------------------------------------------------------------------------------.....  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11403  284  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  325
J  100.0% (47/47)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_149897

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           272     2e-75
IGHD5-18*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACGA	CTCCCCCAA	GTGGATACGACTATGG	CCT	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGACTCCCCCAAGTGGATACGACTATGGCCTCTATTTTGACTCC	TTPPSGYDYGLYFDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	210	36	0	85.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  P  S  G  F  T  F  S  G  H  A  M  T  W  V  R  R  A  P  G  R  G  L  
                    Query_11404  1    GGTCCCTGAGACTCTCCTGTGCACCCTCTGGCTTCACTTTTAGTGGCCATGCCATGACCTGGGTCCGCCGAGCTCCAGGGAGGGGGCTGG  90
V  85.4% (210/246)  IGHV3-23*01  47   .......................G.......A.....C.....CA..T.........G...........AG..........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  G  T  G  T  R  T  F  Y  A  D  S  V  K  S  R  F  T  I  S  R  D  N  R  
                    Query_11404  91   AGTGGGTCTCTTCCATCACTGGGACTGGAACTAGAACGTTCTACGCAGACTCCGTGAAGAGCCGGTTCACCATCTCCAGAGACAATCGCA  180
V  85.4% (210/246)  IGHV3-23*01  137  ..........AG.T..T.G...T.G...TGG...C..A.A...................G..........................TC..  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  R  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  T  T  P  P  S  G  Y  D  Y  
                    Query_11404  181  AGAACAGGCTCTATCTGCAAATGAACTCATTGAGAGCCGAAGACACGGCCATATATTATTGTACGACTCCCCCAAGTGGATACGACTATG  270
V  85.4% (210/246)  IGHV3-23*01  227  ......C...G...............AGCC..........G.........G.......C...G...------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  87.5% (14/16)    IGHD5-18*01  1    ---------------------------------------------------------------------------........AG.....  15

                                      ---------------->                                  
                                      G  L  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11404  271  GCCTCTATTTTGACTCCTGGGGCCAGGGAACCCTCGTCACCGTCTCCTCAG  321
D  87.5% (14/16)    IGHD5-18*01  16   .--------------------------------------------------  16
J  93.6% (44/47)    IGHJ4*02     2    ----...C.......A..................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_303529

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     6e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_11405  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_11405  91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_11405  181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_11405  271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_303524

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            350     9e-99
IGHD2-2*01                                                                                            14.1    9.9  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGAGCCCCAA	TAGTCCCAGC	GCTGATATACAGACC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGAGCCCCAATAGTCCCAGCGCTGATATACAGACCCAACTGGTTCGCCCCC	ARERAPIVPALIYRPNWFAP	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	15	9	0	62.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	257	33	0	88.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  S  G  A  S  V  K  V  S  C  K  A  S  G  Y  R  F  D  S  H 
                    Query_11406  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGTCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGCTACAGGTTCGATAGTCAT  91
V  88.6% (257/290)  IGHV1-3*01   7    .....T...........G...............C.....................................A....CC...AC...CT..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  H  W  L  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  V  A  D  G  Y  T  R  Y  S  Q 
                    Query_11406  92   GGCATCCATTGGCTGCGCCAGGCCCCCGGACAAGGGCTTGAGTGGATGGGCTGGATCAACGTTGCCGATGGTTACACGAGATATTCACAG  181
V  88.6% (257/290)  IGHV1-3*01   97   .CT..G......G....................A................A..........C..G.A.....A....A.A..........  186
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  F  Q  G  R  V  T  T  T  R  D  T  S  A  S  T  A  F  V  E  L  R  S  L  R  S  E  D  T  A 
                    Query_11406  182  AGGTTCCAAGGGAGAGTCACCACTACCAGAGACACATCCGCGAGCACAGCTTTCGTGGAACTGAGGAGCCTGAGATCTGAAGACACGGCT  271
V  88.6% (257/290)  IGHV1-3*01   187  .A......G..C..........T......G....................C.A.A....G.....C........................  276
                                       K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><-------------------------CDR3-IMGT------------------------>                  
                                       V  Y  Y  C  A  R  E  R  A  P  I  V  P  A  L  I  Y  R  P  N  W  F  A  P  W  G  Q  G  T  L 
                    Query_11406  272  GTCTATTACTGTGCGAGAGAAAGAGCCCCAATAGTCCCAGCGCTGATATACAGACCCAACTGGTTCGCCCCCTGGGGCCAGGGAACCCTG  361
V  88.6% (257/290)  IGHV1-3*01   277  ..G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD2-2*01   13   -------------------------------....A.....-------------------------------------------------  22
J  97.9% (47/48)    IGHJ5*02     2    --------------------------------------------------------...........A......................  35

                                                    
                                       V  T  V  S  S
                    Query_11406  362  GTCACCGTCTCCTC  375
J  97.9% (47/48)    IGHJ5*02     36   ..............  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_298940

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           277     9e-77
IGHD2-15*01                                                                                           12.2    34   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTC	ATTGTA	T	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGTGGCGGATGACGGGTGGCGGGGGGGCAGACGCGTGTCATTGTATTACGGTATGGACGTC	ARGVADDGWRGGRRVSLYYGMDV	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	211	34	0	86.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  H  C  W  T  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_11407  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTTAGTGGTCACTGCTGGACCTGGATTCGCCAGACACCAGGGAAGGGACTGGAA  90
V  86.1% (211/245)  IGHV4-34*01  49   ......................................C......T...A.....G......C......C.C...........G.....G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  M  N  H  K  G  R  T  T  Y  N  P  S  L  M  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11407  91   TGGATTGGTGAGATGAATCACAAAGGCAGGACGACCTACAACCCGTCGCTAATGAGTCGAGTCACCATCTCAGTGGACACGTCCAAGAAT  180
V  86.1% (211/245)  IGHV4-34*01  139  ........G..A..C.....T.GT..A..C..C.A............C..C.A...............A.....A..............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  L  S  L  R  L  T  S  L  I  A  A  D  T  A  M  Y  Y  C  A  R  G  V  A  D  D  G  W  R  G 
                    Query_11407  181  CAGCTCTCCCTGAGATTGACCTCTTTAATCGCCGCGGACACGGCTATGTATTACTGTGCGAGAGGCGTGGCGGATGACGGGTGGCGGGGG  270
V  86.1% (211/245)  IGHV4-34*01  229  ...T.........AGC...G....G.G.C................G...................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      3-IMGT----------------------------->                                 
                                       G  R  R  V  S  L  Y  Y  G  M  D  V  W  G  Q  G  V  T  V  T  V  S  S 
                    Query_11407  271  GGCAGACGCGTGTCATTGTATTACGGTATGGACGTCTGGGGCCAGGGAGTCACGGTCACCGTCTCCTCA  339
D  100.0% (6/6)     IGHD2-15*01  6    --------------......-------------------------------------------------  11
J  91.7% (44/48)    IGHJ6*02     15   ---------------------.......................A..GAC...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_303526

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            321     7e-90
IGHD2-21*02                                                                                           14.1    8.5  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCTCTCCTAGAA	GTGACTG	GGCGAGGGGGGGGACT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCTCTCCTAGAAGTGACTGGGCGAGGGGGGGGACTTGGTTCGACCCC	AASPRSDWARGGTWFDP	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  D  S  I  G  I  T  K  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11408  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCATCGGCATTACTAAGTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  92.2% (224/243)  IGHV4-4*02   49   ...............................G.......A...G..G...C.......................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  A  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  D  I  S  V  D  K  S  K 
                    Query_11408  91   GAGTGGATTGGGGAAGCCTATTATAGTGGGAGCACCAACTACAACCCGTCCCTCAAAAGTCGAGTCGACATATCGGTAGATAAGTCCAAG  180
V  92.2% (224/243)  IGHV4-4*02   139  ...............AT....C..................................G.........AC......A.....C.........  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  A  S  P  R  S  D  W  A  R 
                    Query_11408  181  AACCAGTTCTCCCTGAAGTTAACCTCTATGACCGCCGCGGACACGGCCGTATATTATTGTGCGGCCTCTCCTAGAAGTGACTGGGCGAGG  270
V  92.2% (224/243)  IGHV4-4*02   229  ..................C.G.G....G......................G.....C......---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD2-21*02  15   ----------------------------------------------------------------------------.......-------  21

                                      -------------------->                                  
                                       G  G  T  W  F  D  P  W  G  Q  G  I  Q  V  I  V  S  S  
                    Query_11408  271  GGGGGGACTTGGTTCGACCCCTGGGGCCAGGGAATCCAGGTCATCGTCTCCTCAG  325
J  93.5% (43/46)    IGHJ5*02     6    ---------.........................C..T.....C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_303527

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           336     1e-94
IGHD3-22*01                                                                                           23.8    0.011
IGHJ2*01                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAT	TATTTCCATGATAGTCGTGGT	G	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCATTATTTCCATGATAGTCGTGGTGACTGGTACTTCGATCTC	ARDHYFHDSRGDWYFDL	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  H  D  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11409  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACTGTCAGTCACGACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-53*01  47   .....................................C......AG.A..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  H  R  D  G  K  T  D  Y  A  V  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_11409  91   AGTGGGTCTCAGTTATTCATAGGGATGGAAAAACAGACTATGCAGTCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.5% (231/247)  IGHV3-53*01  137  .................T....C.G...T.GC...T....C....A............................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------------CDR3-IMGT-
                                      N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  H  Y  F  H  D  S  R  
                    Query_11409  181  ACACTGTGTATCTTCAAATGAACAGCCTGCGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGACCATTATTTCCATGATAGTCGTG  270
V  93.5% (231/247)  IGHV3-53*01  227  ....GC.......................A.....................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  85.7% (18/21)    IGHD3-22*01  2    -----------------------------------------------------------------------....A.T........A...  20

                                      ------------------->                                  
                                      G  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11409  271  GTGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  85.7% (18/21)    IGHD3-22*01  21   ..----------------------------------------------------  22
J  100.0% (51/51)   IGHJ2*01     3    ---...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_303520

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           272     2e-75
IGHD5-18*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACGA	CTCCCCCAA	GTGGATACGGCTATGG	CCT	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGACTCCCCCAAGTGGATACGGCTATGGCCTCTATTTTGACTCC	TTPPSGYGYGLYFDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	210	36	0	85.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  P  S  G  F  T  F  S  G  H  A  M  T  W  V  R  R  A  P  G  R  G  L  
                    Query_11410  1    GGTCCCTGAGACTCTCCTGTGCACCCTCTGGCTTCACTTTTAGTGGCCATGCCATGACCTGGGTCCGCCGAGCTCCAGGGAGGGGGCTGG  90
V  85.4% (210/246)  IGHV3-23*01  47   .......................G.......A.....C.....CA..T.........G...........AG..........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  G  T  G  T  R  T  F  Y  A  D  S  V  K  S  R  F  T  I  S  R  D  N  R  
                    Query_11410  91   AGTGGGTCTCTTCCATCACTGGGACTGGAACTAGAACGTTCTACGCAGACTCCGTGAAGAGCCGGTTCACCATCTCCAGAGACAATCGCA  180
V  85.4% (210/246)  IGHV3-23*01  137  ..........AG.T..T.G...T.G...TGG...C..A.A...................G..........................TC..  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  R  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  T  T  P  P  S  G  Y  G  Y  
                    Query_11410  181  AGAACAGGCTCTATCTGCAAATGAACTCATTGAGAGCCGAAGACACGGCCATATATTATTGTACGACTCCCCCAAGTGGATACGGCTATG  270
V  85.4% (210/246)  IGHV3-23*01  227  ......C...G...............AGCC..........G.........G.......C...G...------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.8% (15/16)    IGHD5-18*01  1    ---------------------------------------------------------------------------........A......  15

                                      ---------------->                                  
                                      G  L  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11410  271  GCCTCTATTTTGACTCCTGGGGCCAGGGAACCCTCGTCACCGTCTCCTCAG  321
D  93.8% (15/16)    IGHD5-18*01  16   .--------------------------------------------------  16
J  93.6% (44/47)    IGHJ4*02     2    ----...C.......A..................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_303521

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           341     5e-96
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGATGGA	ATTACTAT	CAAACGAAGCA	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCGATGGAATTACTATCAAACGAAGCAATGGTTTTGATATA	TRGDGITIKRSNGFDI	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_11411  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGGCTTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  94.3% (232/246)  IGHV3-53*01  47   ................................................A.......AGC......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  G  N  S  K  
                    Query_11411  91   AGTGGGTCTCAGTTATTTACAGCGGTGGTACCACATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGGCAATTCCAAGA  180
V  94.3% (232/246)  IGHV3-53*01  137  ...................T..........G........A......................................A...........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  L  Y  Y  C  T  R  G  D  G  I  T  I  K  R  
                    Query_11411  181  ACACGCTGTATCTTCAAATGCACAGCCTGAGAGCCGACGACACGGCCCTGTACTACTGTACGAGAGGCGATGGAATTACTATCAAACGAA  270
V  94.3% (232/246)  IGHV3-53*01  227  ....................A................G.........G....T......G......------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  3    --------------------------------------------------------------------------........--------  10

                                      ---------------->                                  
                                      S  N  G  F  D  I  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_11411  271  GCAATGGTTTTGATATATGGGGCCAAGGGACACTGGTCCCCGTCTCTTCAG  321
J  91.7% (44/48)    IGHJ3*02     3    ---...C.........C...............A.....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_298947

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHD6-13*01                                                                                           12.2    33   
IGHJ5*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCGCCGACG	GCAGCA	CCCCCTTCTTCTTCCCCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCGCCGACGGCAGCACCCCCTTCTTCTTCCCCGACTGGTTCGACCCC	ARTADGSTPFFFPDWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	224	18	0	92.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  I  S  G  G  S  I  N  K  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_11412  4    CCCTGAGACTCTCCTGTACTATCTCTGGTGGCTCCATCAATAAATACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAGT  93
V  92.6% (224/242)  IGHV4-59*01  50   .....TCC...A....C...G..................G..GT...........C.............................G....  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  R  S  K  N  
                    Query_11412  94   GGATAGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACAGGTCCAAGAACC  183
V  92.6% (224/242)  IGHV4-59*01  140  ....T..G...............................................................G......C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  V  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  A  D  G  S  T  P  F  F  
                    Query_11412  184  AGGTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAACCGCCGACGGCAGCACCCCCTTCTTCT  273
V  92.6% (224/242)  IGHV4-59*01  230  ..T.........A.................................G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD6-13*01  8    ------------------------------------------------------------------------......------------  13

                                      ------------------->                                  
                                      F  P  D  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11412  274  TCCCCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (48/48)   IGHJ5*02     4    ------................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_298946

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         255     3e-70
IGHD3-9*01                                                                                            14.1    8.9  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTCTCGTC	ACGATAT	AGGCATCCAAT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGTTCTCGTCACGATATAGGCATCCAATACTTCTTTGACTAC	VRGSRHDIGIQYFFDY	261	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	45	47	3	3	0	0	100
CDR1-IMGT	48	74	27	18	9	0	66.7
FR2-IMGT	75	125	51	46	5	0	90.2
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	103	11	0	90.4
CDR3-IMGT (germline)	261	267	7	6	1	0	85.7
Total	N/A	N/A	223	193	30	0	86.5


Alignments

                                        <F><--------CDR1-IMGT--------><--------------------FR2-IMGT---------------------><-----CDR
                                         S  G  P  S  I  S  N  S  Y  S  W  G  W  I  R  Q  P  P  G  R  G  L  Q  W  M  G  S  L  F  H 
                    Query_11413    45   TCTGGTCCCTCTATCAGTAATTCTTATTCCTGGGGCTGGATCCGGCAGCCCCCGGGGAGGGGGCTGCAGTGGATGGGCAGTCTCTTTCAT  134
V  86.5% (193/223)  IGHV4-38-2*02  73   ......TA...C.....C.G.GG...C.A........................A....A.......G.......T..G...A...A....  162
                                         S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  H 

                                        2-IMGT-----><----------------------------------------------------FR3-IMGT-----------------
                                         A  G  S  T  Y  Y  N  P  S  L  K  S  R  V  S  M  S  L  D  T  S  K  T  Q  F  S  L  K  L  H 
                    Query_11413    135  GCTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCTCCATGTCATTAGACACGTCGAAGACGCAGTTCTCCCTGAAGTTACAC  224
V  86.5% (193/223)  IGHV4-38-2*02  163  AG........................................A....A...G..........C....AC...............C.GAG.  252
                                         S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S 

                                        -----------------------------------><-------------------CDR3-IMGT------------------>      
                                         S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  G  S  R  H  D  I  G  I  Q  Y  F  F  D  Y  W  G 
                    Query_11413    225  TCCGTGACCGCCGCAGACACGGCCGTGTATTACTGTGTGAGAGGTTCTCGTCACGATATAGGCATCCAATACTTCTTTGACTACTGGGGC  314
V  86.5% (193/223)  IGHV4-38-2*02  253  ..T..................................C.....-----------------------------------------------  295
                                         S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                                                 
D  100.0% (7/7)     IGHD3-9*01     6    ----------------------------------------------------.......-------------------------------  12
J  93.8% (45/48)    IGHJ4*02       1    ----------------------------------------------------------------------...A................  20

                                                                    
                                         R  G  A  L  V  T  V  S  S  
                    Query_11413    315  CGGGGAGCCCTGGTCACCGTCTCCTCAG  342
J  93.8% (45/48)    IGHJ4*02       21   .A....A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_194174

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           338     5e-95
IGHD2-15*01                                                                                           12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGGGGCCCGAGC	GGTGGT	CTCCGCCAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGGGGCCCGAGCGGTGGTCTCCGCCAGTTTGACTCC	AKRGPSGGLRQFDS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11414  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCGGCAGCTATGGCATGCACTGGGTCCGCCAGGCTCCTGGCAAGGGGCTGG  90
V  93.5% (232/248)  IGHV3-30*18  47   .........................................A.T................................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  L  A  A  I  S  Y  D  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  M  S  
                    Query_11414  91   ATTGGTTGGCAGCTATTTCATATGATGGAAGTAATACATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCCGAGACATGTCCA  180
V  93.5% (232/248)  IGHV3-30*18  137  .G...G......T...A...................A........................................A......AT....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  H  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  R  G  P  S  G  G  L  
                    Query_11414  181  AGCACACCCTCTATCTCCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTTTATTACTGTGCGAAAAGGGGCCCGAGCGGTGGTCTCC  270
V  93.5% (232/248)  IGHV3-30*18  227  ..A....G..G.....G...................................G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-15*01  14   --------------------------------------------------------------------------------......----  19

                                      ------------->                                  
                                      R  Q  F  D  S  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_11414  271  GCCAGTTTGACTCCTGGGGCCAGGGAACCCTGGTCATCGTCTCGTCAG  318
J  93.0% (40/43)    IGHJ4*02     6    -----.......A.......................C......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_150739

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            307     1e-85
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCCACCTA	AGTAGTGGTT	CTCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCACCTAAGTAGTGGTTCTCATTTTGAGTGC	ARPHLSSGSHFEC	237	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	104	10	0	91.2
CDR3-IMGT (germline)	237	242	6	6	0	0	100
Total	N/A	N/A	230	213	17	0	92.6


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  
                    Query_11415  13   GTGCAGCCTCTGGATTCACCTTTAGTTCTTATTGGATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAA  102
V  92.6% (213/230)  IGHV3-7*01   65   ..........................AGC..........GC.................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  Q  D  G  S  Q  K  K  S  V  D  S  L  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_11415  103  ACCAAGATGGAAGTCAGAAAAAATCTGTGGACTCTCTGAAGGGCCGATTCACCATTTCCAGAGACAATGCCAAGAACTCACTGTATCTGC  192
V  92.6% (213/230)  IGHV3-7*01   155  .G............G.....T.C.A..........G...................C...........C......................  244
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><--------------CDR3-IMGT-------------->       
                                      Q  M  D  S  L  T  T  E  D  T  A  V  Y  Y  C  A  R  P  H  L  S  S  G  S  H  F  E  C  W  G  
                    Query_11415  193  AAATGGACAGCCTGACAACCGAAGACACGGCTGTGTATTACTGTGCGAGACCCCACCTAAGTAGTGGTTCTCATTTTGAGTGCTGGGGCC  282
V  92.6% (213/230)  IGHV3-7*01   245  .....A.........G.G....G...........................----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (10/10)   IGHD3-22*01  14   -----------------------------------------------------------..........---------------------  23
J  95.3% (41/43)    IGHJ4*02     6    --------------------------------------------------------------------------.....C.A........  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_11415  283  AGGGAACCCTGGTCACCGTCTCCTCAG  309
J  95.3% (41/43)    IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_150738

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           310     1e-86
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	T	TGGTTC	CGATCGATTCCTTGCCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTTGGTTCCGATCGATTCCTTGCCCAC	ARVGSDRFLAH	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  F  N  D  G  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  R 
                    Query_11416  1    ACCCTGTCCCTCACCTGCACTGTCTCGGGTGGCTCCTTCAACGATGGCAATTATTACTGGAGCTGGATCCGACAGCCCCCAGGGAAGAGA  90
V  89.6% (224/250)  IGHV4-61*01  49   ..........................T.........G...G.AG...T.G...C.................G...............G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  Y  Y  T  G  S  T  T  D  N  P  S  L  K  S  R  V  T  M  A  V  D  T  P 
                    Query_11416  91   CTGGAGTGGATAGGGTTTATCTATTACACTGGGAGCACCACCGACAACCCCTCCCTCAAGAGTCGAGTCACCATGGCAGTTGACACGCCC  180
V  89.6% (224/250)  IGHV4-61*01  139  ...........T....A...........G...........A.T...............................AT....A......T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  R  L  G  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  V  G  S  D  R  F  L 
                    Query_11416  181  AAGAACCAGTTCTCCCTGCGGCTAGGGTCTGTGACCTCTGCGGACACGGCCGTGTATTACTGTGCCAGAGTTGGTTCCGATCGATTCCTT  270
V  89.6% (224/250)  IGHV4-61*01  229  ..................AA...GA.C.........G............................G....--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01  10   -----------------------------------------------------------------------......-------------  15

                                      ----->                                  
                                       A  H  W  A  Q  G  T  L  V  T  V  S  S  
                    Query_11416  271  GCCCACTGGGCCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  97.2% (35/36)    IGHJ4*02     13   ----......G.............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_42619

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           341     5e-96
IGHD1-26*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GACTC	GGTATAGT	TTCAAGTATGCTTTC	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAACAGAGACTCGGTATAGTTTCAAGTATGCTTTCGACGTC	TTETRYSFKYAFDV	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	105	9	0	92.1
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	237	19	0	92.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  F  S  S  T  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11417  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCTTCAGTAGCACCTGGATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  92.6% (237/256)  IGHV3-15*01  47   .......T...........................A.T.......A.G.........G.....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  R  T  D  G  G  T  T  D  H  A  T  P  V  K  G  R  F  S  I  S  R  D  
                    Query_11417  91   AGTGGGTTGGCCGCATTAAAAGCAGAACTGATGGTGGGACAACAGACCACGCTACACCCGTGAAAGGCAGATTCTCCATCTCAAGAGATG  180
V  92.6% (237/256)  IGHV3-15*01  137  .............T..........A......................T.....G....................A...............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  S  T  L  F  L  Q  M  S  S  L  K  T  E  D  T  G  V  Y  Y  C  T  T  E  T  R  Y  S  
                    Query_11417  181  ATTCAAAAAGTACGCTGTTTCTGCAAATGAGCAGCCTGAAAACCGAGGACACAGGCGTTTATTACTGTACAACAGAGACTCGGTATAGTT  270
V  92.6% (237/256)  IGHV3-15*01  227  .........AC.......A...........A.......................C...G...........C.....--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (8/8)     IGHD1-26*01  1    ---------------------------------------------------------------------------------........-  8

                                      IMGT--------------->                                
                                      F  K  Y  A  F  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_11417  271  TCAAGTATGCTTTCGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  322
J  100.0% (38/38)   IGHJ6*02     24   --------------......................................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_42618

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD2-2*02                                                                                            14.1    8.3  
IGHJ3*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGGGCCCTAGAAG	GCTATAC	AGAG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGCCCTAGAAGGCTATACAGAGGCTTTTGATATC	ARGGALEGYTEAFDI	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  N  Y  Y  W  S  W  M  R  Q  P  P  G  K  G  L  E  
                    Query_11418  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAATAATTACTACTGGAGCTGGATGCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  91.4% (222/243)  IGHV4-59*01  50   .....TCC...A...........................G..G..................C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  C  F  Y  Y  G  G  N  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  G  T  S  K  N  
                    Query_11418  94   GGATTGGGTGTTTCTATTACGGTGGAAACACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTGGGCACGTCCAAGAACC  183
V  91.4% (222/243)  IGHV4-59*01  140  .........A.A........A....G.G....A..................................A.....A.A..............  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  N  S  L  T  S  A  D  T  A  V  Y  Y  C  A  R  G  G  A  L  E  G  Y  T  E  
                    Query_11418  184  AGTTCTCCCTGAAGCTGAACTCTCTGACGTCTGCGGACACGGCCGTATATTACTGTGCGAGAGGGGGGGCCCTAGAAGGCTATACAGAGG  273
V  91.4% (222/243)  IGHV4-59*01  230  ..................G....G....CG................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (7/7)     IGHD2-2*02   24   ------------------------------------------------------------------------------.......-----  30
J  95.7% (44/46)    IGHJ3*02     5    -----------------------------------------------------------------------------------------.  5

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  A  V  T  V  S  S  
                    Query_11418  274  CTTTTGATATCTGGGGCCAAGGGACAGCGGTCACCGTCTCTTCAG  318
J  95.7% (44/46)    IGHJ3*02     6    ..........................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_194172

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            355     3e-100
IGHD3-10*01                                                                                           10.3    115   
IGHJ5*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GA	TCGGG	ATGTCTCCCTGCCT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGATCGGGATGTCTCCCTGCCTCC	VGGSGCLPAS	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  N  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11419  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCAGCTTTAGTAACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-7*01   47   ............................T.......C........G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  K  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11419  91   AGTGGGTGGCCAACATAAAGAAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (238/249)  IGHV3-7*01   137  ....................C.................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  V  G  G  S  G  C  L  P  A  
                    Query_11419  181  AGAACTCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGTGGGAGGATCGGGATGTCTCCCTGCCT  270
V  95.6% (238/249)  IGHV3-7*01   227  ...................A...A............C..........................C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   -----------------------------------------------------------------------.....--------------  18

                                      ->                                  
                                      S  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_11419  271  CCTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  306
J  97.2% (35/36)    IGHJ5*02     16   .............................T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_150733

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           402     3e-114
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGCA	TATTACTATGATAGTAGT	ATTTATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGCATATTACTATGATAGTAGTATTTATCTTGACTAC	ARAAYYYDSSIYLDY	283	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	69	69	65	4	0	94.2
CDR1-IMGT	70	93	24	18	6	0	75
FR2-IMGT	94	144	51	49	2	0	96.1
CDR2-IMGT	145	168	24	23	1	0	95.8
FR3-IMGT	169	282	114	111	3	0	97.4
CDR3-IMGT (germline)	283	289	7	7	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  R  T  S  R  D  S  F  T  N  H 
                    Query_11420  1    CAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCTGGGGCCTCGGTGAAGGTCTCCTGCAGGACTTCTCGTGACTCCTTTACCAACCAT  90
V  94.5% (273/289)  IGHV1-18*01  7    ....................T.......................A................A.G.....G..T..A.........G.T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  N  T  N  Y  A  Q 
                    Query_11420  91   GGATTTAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAAACTATGCACAG  180
V  94.5% (273/289)  IGHV1-18*01  97   ..TA.C......................................................G.............................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  A  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_11420  181  AAGTTCCAGGGCAGAGCCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  270
V  94.5% (273/289)  IGHV1-18*01  187  ...C............T.........................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  A  A  Y  Y  Y  D  S  S  I  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_11420  271  GTTTATTACTGTGCGAGAGCCGCATATTACTATGATAGTAGTATTTATCTTGACTACTGGGGCCAGGGAACCCTCGTCACCGTCTCCTCA  360
V  94.5% (273/289)  IGHV1-18*01  277  ..G................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (18/18)   IGHD3-22*01  2    ------------------------..................------------------------------------------------  19
J  97.6% (41/42)    IGHJ4*02     7    -------------------------------------------------.........................G...............  47

                                       
                                       
                    Query_11420  361  G  361
J  97.6% (41/42)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_42614

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            394     7e-112
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_11421  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.4% (271/290)  IGHV1-8*02   6    ..................G..........................................................C.....C......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_11421  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.4% (271/290)  IGHV1-8*02   96   ........A.........................................................C.......................  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_11421  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.4% (271/290)  IGHV1-8*02   186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11421  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.4% (271/290)  IGHV1-8*02   276  ...G................---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01   9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_150731

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD6-19*01                                                                                           12.2    30   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTGGC	GGCTGG	CTTAC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTGGCGGCTGGCTTACGGACGTC	TRGGGWLTDV	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11422  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTGGTTTCTACTGGAGCTGGATTCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   .............................T............A...A...............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  H  Y  S  G  H  T  N  Y  N  P  S  L  R  S  R  V  I  I  S  L  D  T  S  N  N 
                    Query_11422  91   TGGATTGGGAATATCCACTACAGTGGGCACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCATCATATCGCTGGACACGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  .........T.....T.T.........AG.......................A...........C......AG.A...........G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  I  S  L  K  V  N  S  G  T  A  A  D  T  A  L  Y  Y  C  T  R  G  G  G  W  L  T  D  V  W 
                    Query_11422  181  CAGATCTCCCTGAAGGTGAACTCTGGGACCGCTGCGGACACGGCCCTCTATTATTGTACGAGAGGTGGCGGCTGGCTTACGGACGTCTGG  270
V  90.6% (221/244)  IGHV4-59*01  229  ...T...........C...G.....T...................G.G.....C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  13   ---------------------------------------------------------------------......---------------  18
J  100.0% (40/40)   IGHJ6*02     23   --------------------------------------------------------------------------------..........  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_11422  271  GGCCAAGGGACCACGGTCACCGTCTCCTCA  300
J  100.0% (40/40)   IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_42616

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11423  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11423  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_11423  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11423  271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_194179

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           316     2e-88
IGHD6-13*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CTTC	TATAACAGCAGTTGG	GTACTGGA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTTCTATAACAGCAGTTGGGTACTGGATGACTTC	ARDFYNSSWVLDDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  R  I  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11424  1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTCAGAATCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.4% (226/250)  IGHV3-21*01  47   ........................C..................T.G.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  G  S  T  H  V  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_11424  91   AGTGGGTCTCATCGATTAGTAGTGGTTCAACTCATGTATATTATGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAATGCCA  180
V  90.4% (226/250)  IGHV3-21*01  137  .............C.........A..AGT.G.T.CA....C..C........A..................A.............C....  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  Q  S  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  F  Y  N  S  S  W  
                    Query_11424  181  AGCAATCACTGTATCTGCAAATGCACAGCCTGAGAGCCGACGACACGGCTGTATACTACTGTGCGAGAGACTTCTATAACAGCAGTTGGG  270
V  90.4% (226/250)  IGHV3-21*01  227  ..A.C..................A................G...........G..T..............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD6-13*01  4    --------------------------------------------------------------------------....G......C...-  18

                                      ------------->                                
                                      V  L  D  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11424  271  TACTGGATGACTTCTGGGGCCAGGGGACCCTGGTCACCGTCTCCTC  316
J  94.9% (37/39)    IGHJ4*02     8    -------.....A............A....................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_42610

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           311     4e-87
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              46.8    3e-09


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTTCGAC	AGTAGTGGTTAT	CGGGGGCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGTTTCGACAGTAGTGGTTATCGGGGGCCACTGGTTGGTCCCC	GKVSTVVVIGGHWLVP	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	224	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  H  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11425  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACATTTAGTCACTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.0% (224/249)  IGHV3-23*01  47   ....................G................C.....CAG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  L  R  G  S  G  L  N  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11425  91   AGTGGGTCTCCGCCCTTAGGGGTAGTGGTCTTAACACTTACTATACAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  90.0% (224/249)  IGHV3-23*01  137  ..........A..TA....T.........GG..G...A.....CG...................G.....................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  N  T  L  Y  L  Q  M  E  S  L  S  A  E  D  T  A  V  Y  F  C  G  K  V  S  T  V  V  V  I  
                    Query_11425  181  ACAACACGTTGTATCTGCAAATGGAGAGCCTGAGCGCCGAGGACACGGCCGTATATTTCTGTGGGAAAGTTTCGACAGTAGTGGTTATCG  270
V  90.0% (224/249)  IGHV3-23*01  227  .G......C..............A.C........A......................A.....C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD3-22*01  14   ----------------------------------------------------------------------------............--  25

                                      T------------------>                                  
                                      G  G  H  W  L  V  P  W  G  P  *  A  L  V  S  A  P  S  
                    Query_11425  271  GGGGCCACTGGTTGGTCCCCTGGGGCCCGTGAGCCCTGGTCTCCGCCCCCTCAG  324
J  83.3% (40/48)    IGHJ5*02     4    ------.......C.A...........A.G..A........A...T.T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_150735

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           369     2e-104
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	ATGGACCTCAA	TACTACGATTCGGGGAGTTATTATAAC	GAAC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATGGACCTCAATACTACGATTCGGGGAGTTATTATAACGAACTTGACTAC	ANGPQYYDSGSYYNELDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	241	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11426  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (241/246)  IGHV3-21*01  47   ....................................C.......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11426  91   AGTGGGTCTCATCCATTAGTAGTAGTAGTACTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.0% (241/246)  IGHV3-21*01  137  ..............................G...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  H  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  N  G  P  Q  Y  Y  D  S  
                    Query_11426  181  AGCACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAATGGACCTCAATACTACGATTCGG  270
V  98.0% (241/246)  IGHV3-21*01  227  ..A...............................................................------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.6% (25/27)    IGHD3-10*01  5    -----------------------------------------------------------------------------.....T.G.....  17

                                      IMGT--------------------->                                  
                                      G  S  Y  Y  N  E  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11426  271  GGAGTTATTATAACGAACTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  92.6% (25/27)    IGHD3-10*01  18   ..............----------------------------------------------  31
J  100.0% (42/42)   IGHJ4*02     7    ------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_150734

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            318     6e-89
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GAGCAG	GCAGTGGCT	CAAC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGAGCAGGCAGTGGCTCAACCTTTGCCTAC	ATGAGSGSTFAY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  E  F  V  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11427  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGAATTCGTCTTCAGTTCTTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-7*01   47   .....................C........G....AC...T...AGC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_11427  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAACACTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACCCCA  180
V  90.8% (226/249)  IGHV3-7*01   137  ......................................T......T........................................G...  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  T  S  L  Y  L  Q  M  N  F  L  R  G  D  D  S  A  V  Y  Y  C  A  T  G  A  G  S  G  S  T  
                    Query_11427  181  AGACTTCACTATATCTGCAAATGAATTTCCTGAGAGGTGACGACTCGGCTGTGTACTACTGTGCGACAGGAGCAGGCAGTGGCTCAACCT  270
V  90.8% (226/249)  IGHV3-7*01   227  ...AC.....G..............CAG........CC..G...A..........T..........G..---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-19*01  8    ---------------------------------------------------------------------------.........------  16
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11427  271  TTGCCTACTGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  312
J  95.5% (42/44)    IGHJ4*02     7    ...A..................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_269063

Length=316
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            358     3e-101
IGHD2-8*01                                                                                            12.2    29    
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	TGGTGT	GCGG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGGTGTGCGG	ASGVR	243	257	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  S  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11428  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAACAGTTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (238/247)  IGHV3-7*01   47   .............................................G.TA.........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  P  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11428  91   AGTGGGTGGCCAACATAAAGCCAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (238/247)  IGHV3-7*01   137  .....................A....................................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--CDR3-IMGT-->             
                                      K  S  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  G  V  R  W  G  Q  G  
                    Query_11428  181  AAAGCTCACTGTTTCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGTGGTGTGCGGTGGGGCCAGGGAA  270
V  96.4% (238/247)  IGHV3-7*01   227  .G.A........A.......................C..............................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD2-8*01   16   -------------------------------------------------------------------......-----------------  21
J  100.0% (34/34)   IGHJ4*02     15   -----------------------------------------------------------------------------.............  27

                                                           
                                      T  L  V  T  V  S  S  
                    Query_11428  271  CCCTGGTCACCGTCTCCTCAG  291
J  100.0% (34/34)   IGHJ4*02     28   .....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30515799


Query= Query_265217

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           380     1e-107
IGHD3-16*02                                                                                           16.1    2.6   
IGHJ6*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTCCGAAACCTTCCGGACCAC	CGTTATAC	TC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTCCGAAACCTTCCGGACCACCGTTATACTCTGGACGTC	ARGLRNLPDHRYTLDV	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	68	7	0	90.7
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	46	5	0	90.2
CDR2-IMGT	153	176	24	18	6	0	75
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	269	26	0	91.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  G  G  L  V  K  P  G  G  S  L  R  L  L  C  A  A  S  G  F  T  S  S 
                    Query_11429  3    CAGGTCCAGCTGGTACAGTCTGGAGGAGGCTTGGTCAAGCCTGGAGGGTCCCTGAGACTCCTCTGTGCAGCCTCCGGATTCACCTCCAGT  92
V  91.2% (269/295)  IGHV3-11*01  1    .....G........GG.......G....................................TC............T..........T....  90
                                       Q  V  Q  L  V  E  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  F  Y  V  T  W  I  R  Q  A  P  G  K  G  L  E  W  V  A  Y  I  S  L  T  G  T  T  K  Y  Y 
                    Query_11429  93   GACTTCTACGTGACCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCGCATATATTAGTTTAACTGGTACTACCAAATACTAC  182
V  91.2% (269/295)  IGHV3-11*01  91   ....A....A...G.......................................TT....C......AGT.G.....G.....T.......  180
                                       D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  D  P  V  K  G  R  F  T  I  S  R  D  N  T  K  N  S  L  Y  L  Q  M  N  S  L  T  V  E  D 
                    Query_11429  183  GCAGACCCTGTGAAGGGGCGATTCACCATCTCCAGGGACAACACCAAGAATTCACTGTATCTGCAAATGAACAGCCTGACAGTCGAGGAC  272
V  91.2% (269/295)  IGHV3-11*01  181  ......T..........C........................G.......C............................G..C.......  270
                                       A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  G  L  R  N  L  P  D  H  R  Y  T  L  D  V  W  G  Q  G  S  T  V  T 
                    Query_11429  273  ACGGCCGTGTATTACTGTGCGAGAGGTCTCCGAAACCTTCCGGACCACCGTTATACTCTGGACGTCTGGGGCCAAGGGAGCACGGTCACC  362
V  91.2% (269/295)  IGHV3-11*01  271  .........................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (8/8)     IGHD3-16*02  29   ------------------------------------------------........----------------------------------  36
J  95.1% (39/41)    IGHJ6*02     22   ----------------------------------------------------------.....................C..........  53

                                               
                                       V  S  S 
                    Query_11429  363  GTCTCTTCA  371
J  95.1% (39/41)    IGHJ6*02     54   .....C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_278792

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            420     7e-120
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	274	5	0	98.2


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_11430  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  98.2% (274/279)  IGHV6-1*01   26   ...........................................................G......G....AG.................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_11430  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.2% (274/279)  IGHV6-1*01   116  ..........................................................................................  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_11430  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.2% (274/279)  IGHV6-1*01   206  ..............A...........................................................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------CDR3-IMGT--------->                                  
                                      C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11430  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  98.2% (274/279)  IGHV6-1*01   296  .........---------------------------------------------------------  304
                                      C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02     4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_278790

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           420     7e-120
IGHD3-10*01                                                                                           23.8    0.013 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTAGAA	GGTTCGGGGAGT	CACGACTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTAGAAGGTTCGGGGAGTCACGACTCTTACTACTACGCTATGGACGTC	ARDPLEGSGSHDSYYYAMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  R  Y
                    Query_11431  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGGTA  90
V  96.2% (280/291)  IGHV1-46*01  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  I  I  N  P  S  G  G  T  T  K  Y  A  Q
                    Query_11431  91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCAATAATCAATCCTAGTGGTGGTACCACAAAATACGCACA  180
V  96.2% (280/291)  IGHV1-46*01  96   ..................................................G.........C.............G.....GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  D  L  T  S  L  R  S  E  D  T  A
                    Query_11431  181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGACCTGACCAGCCTGAGATCTGAGGACACGGC  270
V  96.2% (280/291)  IGHV1-46*01  186  ............................................................G....G........................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        I  Y  Y  C  A  R  D  P  L  E  G  S  G  S  H  D  S  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T
                    Query_11431  271  CATCTATTACTGTGCGAGAGATCCTTTAGAAGGTTCGGGGAGTCACGACTCTTACTACTACGCTATGGACGTCTGGGGCCAAGGGACCAC  360
V  96.2% (280/291)  IGHV1-46*01  276  .G.G.................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD3-10*01  11   -------------------------------............-----------------------------------------------  22
J  98.1% (53/54)    IGHJ6*02     9    ----------------------------------------------------..........G...........................  46

                                                      
                                        V  T  V  S  S 
                    Query_11431  361  GGTCACCGTCTCCTCA  376
J  98.1% (53/54)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_278796

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           363     1e-102
IGHD6-19*01                                                                                           21.8    0.040 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCAGG	GCAGTGGCTGG	CACG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTC	ARVPGQWLARGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11432  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (239/246)  IGHV3-53*01  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  M  Y  S  G  G  T  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_11432  91   AGTGGGTCTCAGTTATGTATAGCGGTGGGACCACATACTACGCAGAGTCCGTGAAGGGCCGATTCACCATCTCAAGAGACAATTCCAAGA  180
V  97.2% (239/246)  IGHV3-53*01  137  ................T...........T.G...............C..........................C................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  G  Q  W  L  A  R  
                    Query_11432  181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGTCCCAGGGCAGTGGCTGGCACGCG  270
V  97.2% (239/246)  IGHV3-53*01  227  ..................................................................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD6-19*01  8    -------------------------------------------------------------------------...........------  18
J  100.0% (46/46)   IGHJ6*02     17   ----------------------------------------------------------------------------------------..  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11432  271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (46/46)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_278794

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           324     7e-91
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	27	25	25	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  A  L  E  W
                    Query_11433  3    CCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGCACTGGAGTG  92
V  92.6% (225/243)  IGHV4-59*08  51   .........................................G......................................G.........  140
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W

                                      ---------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IM
                                        I  G  S  I  F  Y  T  G  T  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q
                    Query_11433  93   GATCGGGTCTATCTTTTACACTGGGACCACCAACTACGACCCCTCTCTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGAACCA  182
V  92.6% (225/243)  IGHV4-59*08  141  ...T....A.....A.....G.....G..........A.......C....................A.....A.................  230
                                        I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q

                                      GT----------------------------------------------------><----------------CDR3-IMGT---------
                                        F  S  L  R  V  A  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  H  R  A  A  A  G  P  F
                    Query_11433  183  GTTCTCCCTGAGAGTGGCCTCTCTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTT  272
V  92.6% (225/243)  IGHV4-59*08  231  ...........AGC..AG....G......................G.................---------------------------  293
                                        F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                              
D  100.0% (12/12)   IGHD6-13*01  7    ------------------------------------------------------------------------............------  18
J  93.2% (41/44)    IGHJ4*02     5    ---------------------------------------------------------------------------------------...  7

                                      ------>                                  
                                        D  N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_11433  273  TGACAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  313
J  93.2% (41/44)    IGHJ4*02     8    ....T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_278795

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           325     3e-91
IGHD3-22*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCCTGTC	TGATAGTAGTGG	CTACTCCGGAA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCCTGTCTGATAGTAGTGGCTACTCCGGAAACTACTACTACTACGCTATGGACGTC	ARSLSDSSGYSGNYYYYAMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  E  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_11434  1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCACCTTCAGGTCTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  91.9% (228/248)  IGHV3-48*03  47   ......................A....................TAG...................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  T  S  G  S  G  T  T  I  H  Y  A  D  S  V  Q  G  R  F  T  V  S  R  D  N  G  
                    Query_11434  91   AATGGATTTCATACACTAGTGGTAGTGGAACTACCATACATTACGCAGACTCTGTGCAGGGCCGATTCACCGTCTCCAGAGACAACGGCG  180
V  91.9% (228/248)  IGHV3-48*03  137  .G...G.........T....A.......T.G.......T.C...............A..............A...............C.A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      E  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  L  S  D  S  S  G  
                    Query_11434  181  AGAATTCACTGTTTCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGATCCCTGTCTGATAGTAGTGGCT  270
V  91.9% (228/248)  IGHV3-48*03  227  ....C.......A...G...................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD3-22*01  10   ----------------------------------------------------------------------------............--  21

                                      DR3-IMGT-------------------------->                                
                                      Y  S  G  N  Y  Y  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_11434  271  ACTCCGGAAACTACTACTACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  337
J  98.3% (57/58)    IGHJ6*02     4    ---------...............G..........................................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_278798

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            396     2e-112
IGHD7-27*01                                                                                           10.3    124   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	AGAGGGC	CTGGG	TTGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAGAAGAGGGCCTGGGTTGGTTGACTAC	AHRRGPGLVDY	263	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	27	3	0	90
FR2-IMGT	77	127	51	49	2	0	96.1
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	112	2	0	98.2
CDR3-IMGT (germline)	263	271	9	9	0	0	100
Total	N/A	N/A	271	262	9	0	96.7


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  T  T  G  G  V  A  V  A  W  I  R
                    Query_11435  1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCACCACTGGTGGAGTGGCTGTGGCCTGGATCCG  90
V  96.7% (262/271)  IGHV2-5*01   30   ...........................................................G....A.........G.....G.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  D  W  L  A  L  I  D  G  N  D  D  K  R  F  S  P  S  L  K  S  R  L  T
                    Query_11435  91   TCAGCCCCCAGGAAAGGCCCTGGACTGGCTTGCACTCATTGATGGGAATGATGATAAGCGCTTCAGCCCATCTCTGAAGAGCAGGCTCAC  180
V  96.7% (262/271)  IGHV2-5*01   120  ........................G...............T..T..................A...........................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  H  C  A  H  R
                    Query_11435  181  CATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATCACTGTGCACACAG  270
V  96.7% (262/271)  IGHV2-5*01   210  ............................................................................T.............  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  R

                                      ----CDR3-IMGT----------->                                  
                                        R  G  P  G  L  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11435  271  AAGAGGGCCTGGGTTGGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  329
V  96.7% (262/271)  IGHV2-5*01   300  .----------------------------------------------------------  300
                                                                                                 
D  100.0% (5/5)     IGHD7-27*01  5    --------.....----------------------------------------------  9
J  100.0% (42/42)   IGHJ4*02     7    -----------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_278799

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           361     4e-102
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ2*01                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	TACTATAATCCTAGTGGTTATTAC	GGGTC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACTATAATCCTAGTGGTTATTACGGGTCCTGGTCCTTCGATCTC	ARDYYNPSGYYGSWSFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	238	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_11436  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (238/245)  IGHV4-59*01  49   ............................................................A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  I  P  K  N 
                    Query_11436  91   TGGATTGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGATATCCCCAAGAAC  180
V  97.1% (238/245)  IGHV4-59*01  139  ........G....................................................................C.CGT........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  Y  Y 
                    Query_11436  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACTACTATAATCCTAGTGGTTATTAC  270
V  97.1% (238/245)  IGHV4-59*01  229  ...................G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (21/24)    IGHD3-22*01  5    ------------------------------------------------------------------......G..AG.............  28

                                      -------------------->                                  
                                       G  S  W  S  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11436  271  GGGTCCTGGTCCTTCGATCTCTGGGGCCGGGGCACCCTGGTCACTGTCTCCTCAG  325
J  96.0% (48/50)    IGHJ2*01     4    -----.....A..................T.........................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_124486

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            350     8e-99
IGHD3-16*01                                                                                           14.1    8.5  
IGHJ5*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGC	GTATAATGAT	AAGTCCCAGAATCATA	GGTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGCGTATAATGATAAGTCCCAGAATCATAGGTCCGACTCC	AREAYNDKSQNHRSDS	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  G  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11437  1    ACCCTGTCCCTCACCTGCGCAGTCTCTGGTGCCTCCATCAGCGGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.2% (236/248)  IGHV4-4*02   49   ....................T..........G..........A...............................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  V  G  S  T  N  H  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  R 
                    Query_11437  91   GAGTGGATTGGGGAAATCTATCATGTTGGGAGCACCAACCACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAGG  180
V  95.2% (236/248)  IGHV4-4*02   139  ........................AG.............T..........................................A.....A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  N  D  K  S  Q 
                    Query_11437  181  AACCAGTTCTCCCTCAATCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGAGGCGTATAATGATAAGTCCCAG  270
V  95.2% (236/248)  IGHV4-4*02   229  ..............G..G....G...........................G.................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  90.0% (9/10)     IGHD3-16*01  1    -----------------------------------------------------------------------....T.....---------  10

                                      ----------------->                                  
                                       N  H  R  S  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11437  271  AATCATAGGTCCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  95.6% (43/45)    IGHJ5*01     7    -------...T...............A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_124487

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            310     1e-86
IGHD2-21*01                                                                                           18.0    0.60 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-21*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CAAGAATTACAAGTT	TGGTGATGATCGCTA	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGGGACAAGAATTACAAGTTTGGTGATGATCGCTACTATGATGCATTTGATTTG	TRDKNYKFGDDRYYDAFDL	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  T  Y  W  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_11438  1    GGTCCCTGAGACTCTCCTGTGCTGCCTCAGGTTTCACCTTTGGCACCTATTGGATGACATGGATCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  89.6% (224/250)  IGHV3-7*01   47   ......................A.....T..A.........A.T.G...........GC...G......................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  G  D  G  S  K  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11438  91   AGTGGGTGGCCAATATAAAAGGAGATGGAAGTAAGACATACTATGTGGATTCTGTGAAGGGCCGCTTCACCATCTCCAGAGACAATGCCA  180
V  89.6% (224/250)  IGHV3-7*01   137  .............C.....GCA..........G...A............C..............A....................C....  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  F  Y  Y  C  T  R  D  K  N  Y  K  F  G  
                    Query_11438  181  GGAACTCACTGTATCTGCAAATGAACAGCCTCAGAGTCGAGGACACGGCTTTTTATTACTGTACGAGGGACAAGAATTACAAGTTTGGTG  270
V  89.6% (224/250)  IGHV3-7*01   227  A..............................G....C.............G.G.........G....A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD2-21*01  10   -------------------------------------------------------------------------------------.....  14

                                      -IMGT----------------------->                                  
                                      D  D  R  Y  Y  D  A  F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11438  271  ATGATCGCTACTATGATGCATTTGATTTGTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  333
D  86.7% (13/15)    IGHD2-21*01  15   G....T....-----------------------------------------------------  24
J  94.0% (47/50)    IGHJ3*01     1    -------------......T......G.C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_56249

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           366     2e-103
IGHD2-8*01                                                                                            19.9    0.17  
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD2-8*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCATT	TTGAACTAATGCTGTTTGC	CCGAGAG	TACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCATTTTGAACTAATGCTGTTTGCCCGAGAGTACCACTACTACGGTATGGACGTC	ARDHFELMLFAREYHYYGMDV	249	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	112	2	0	98.2
CDR3-IMGT (germline)	249	256	8	6	2	0	75
Total	N/A	N/A	256	245	11	0	95.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  G  S  G  F  T  F  R  D  Y  T  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11439  1    GGTCCCTGAGACTCTCCTGTACAGGTTCTGGATTCACCTTTCGTGATTATACTATGACCTGGGTCCGCCAGGCTCCTGGGAAGGGGCTGG  90
V  95.7% (245/256)  IGHV3-49*04  47   ........................C................G........G......G..................A.............  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  A  F  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  M  S  R  D  
                    Query_11439  91   AGTGGGTAGGTTTCATTAGAAGCAAAGCTTTTGGTGGCACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATGTCAAGAGATG  180
V  95.7% (245/256)  IGHV3-49*04  137  ..............................A......G.........................................C..........  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  *  Y  C  A  R  D  H  F  E  L  
                    Query_11439  181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTAATACTGTGCGAGAGATCATTTTGAACTAA  270
V  95.7% (245/256)  IGHV3-49*04  227  .............................................................T......A.T.....--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  84.2% (16/19)    IGHD2-8*01   7    ---------------------------------------------------------------------------------...T.....  15

                                      -----CDR3-IMGT-------------------------->                                 
                                      M  L  F  A  R  E  Y  H  Y  Y  G  M  D  V  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_11439  271  TGCTGTTTGCCCGAGAGTACCACTACTACGGTATGGACGTCTGGGGCCAGGGGACCGCGGTCACCGTCTCCTCA  344
D  84.2% (16/19)    IGHD2-8*01   16   ..G...A...----------------------------------------------------------------  25
J  94.7% (54/57)    IGHJ6*02     6    -----------------...T............................A......A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_124485

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11440  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11440  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_11440  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  98.0% (50/51)    IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_11440  271  GACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  310
J  98.0% (50/51)    IGHJ5*02     12   ........................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_124482

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           344     6e-97
IGHD2-15*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGCCCGCTGCCC	GTGGTGGCTG	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGATCAGCCCGCTGCCCGTGGTGGCTGCTTTGACTAC	TRDQPAARGGCFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  N  Y  W  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_11441  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTAACTACTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-74*01  47   ....................G........................G..........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  P  G  G  S  S  T  S  Y  A  A  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_11441  91   TGTGGGTCTCACGAATTAATCCTGGTGGGAGTAGCACAAGCTACGCGGCCTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATGCCA  180
V  94.0% (235/250)  IGHV3-74*01  137  .............T......AG..A.......................A......................A.............C....  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  G  D  T  A  L  Y  Y  C  T  R  D  Q  P  A  A  R  G  
                    Query_11441  181  AGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGTCGGGGACACGGCTCTTTATTACTGTACAAGAGATCAGCCCGCTGCCCGTGGTG  270
V  94.0% (235/250)  IGHV3-74*01  227  ....................................C..A..........G.G.........G.......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD2-15*01  15   ------------------------------------------------------------------------------------.....A  20

                                      ------------->                                  
                                      G  C  F  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11441  271  GCTGCTTTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  318
D  90.0% (9/10)     IGHD2-15*01  21   ....--------------------------------------------  24
J  97.7% (43/44)    IGHJ4*02     5    ----.................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_124483

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           324     7e-91
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGGGATG	AGTGGCTGGT	GATGGCCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGATGAGTGGCTGGTGATGGCCCAC	ARGGDEWLVMAH	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  G  N  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11442  1    GGTCCCTGAGACTCTCCTGTGAAGCGTCTGGATTCACGTTTGGGAACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-33*01  47   .....................C...............C..CA.T.G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  F  Y  D  G  S  I  K  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11442  91   AGTGGGTGGCAGTTATCTTTTATGATGGAAGTATTAAAGACTATGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAACTCCA  180
V  91.6% (228/249)  IGHV3-33*01  137  ................A.GG.............A....T.........................A....................T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  M  V  F  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  R  G  G  D  E  W  L  V  
                    Query_11442  181  AGAATATGGTGTTCCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTATATTACTGTGCGAGAGGGGGGGATGAGTGGCTGGTGA  270
V  91.6% (228/249)  IGHV3-33*01  227  ....C.C.C...AT......................C...............G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD6-19*01  10   ------------------------------------------------------------------------------..........--  19

                                      ------->                                  
                                      M  A  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11442  271  TGGCCCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (36/36)   IGHJ4*02     13   ------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_273078

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            321     6e-90
IGHD5-18*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCCC	TGGATACAGCTATGGTT	CAG	TTTGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCCCTGGATACAGCTATGGTTCAGTTTGTCTAC	ASLDTAMVQFVY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  I  S  G  F  S  I  S  N  Y  W  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11443  1    GGTCCCTGAGACTCTCCTGTGCAATCTCTGGATTCAGTATCAGTAACTATTGGCTGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  91.8% (225/245)  IGHV3-7*03   47   .......................GC...........CCT.T....G.......A.............C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  C  I  K  K  D  E  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11443  91   AGTGGGTGGCCTGCATAAAGAAGGATGAAAGTGAGAAGTACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.8% (225/245)  IGHV3-7*03   137  ...........AA.......C.A....G.........A....................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  M  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  S  L  D  T  A  M  V  Q  
                    Query_11443  181  AGAACTCAATGTATTTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCCTGTATTATTGTGCGTCCCTGGATACAGCTATGGTTCAGT  270
V  91.8% (225/245)  IGHV3-7*03   227  ........C.....C.....................C.............G.......C......-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------------------------------------------------.................----  18
J  97.6% (40/41)    IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                
                                      F  V  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11443  271  TTGTCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  310
J  97.6% (40/41)    IGHJ4*02     7    ...A....................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_273076

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           422     2e-120
IGHD1-7*01                                                                                            12.2    35    
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCTG	GGAACT	CCTGACA	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCTGGGAACTCCTGACAACTCC	ARELGTPDNS	289	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	69	2	0	97.2
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	292	281	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  Q  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  R  
                    Query_11444  5    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGCAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGAT  94
V  96.2% (281/292)  IGHV1-46*01  5    ...................G.........A..........................................................C.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  L  I  N  P  S  D  G  S  T  N  Y  A  
                    Query_11444  95   ACTATATGCACTGGGTGCGGCAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACTAATCAACCCTAGTGATGGTAGCACGAATTACGCAC  184
V  96.2% (281/292)  IGHV1-46*01  95   ...................A.................................A...............G.........A.GC.......  184
                                      Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  D  L  S  S  L  R  S  E  D  T  
                    Query_11444  185  AGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGACCTGAGCAGCCTGAGATCTGAGGACACGG  274
V  96.2% (281/292)  IGHV1-46*01  185  .............................................................G............................  274
                                      Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><----------CDR3-IMGT--------->                                  
                                      A  M  Y  Y  C  A  R  E  L  G  T  P  D  N  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11444  275  CCATGTATTACTGTGCGAGAGAGCTGGGAACTCCTGACAACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  352
V  96.2% (281/292)  IGHV1-46*01  275  ..G...................--------------------------------------------------------  296
                                      A  V  Y  Y  C  A  R                                                           
D  100.0% (6/6)     IGHD1-7*01   10   --------------------------......----------------------------------------------  15
J  97.4% (38/39)    IGHJ4*02     10   ---------------------------------------...A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_56242

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         386     1e-109
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCTTAAGGTCAATCGCGTC	CAGTGGCTGG	GCGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCA	ARHPLRSIASSGWAS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_11445    1    GCAGCTGGTGCAGTCTGGAGGAGAGGTGAAGAAGCCCGGGGAGTCTTTGAGGATTTCCTGTAAGGCTTCTGGATACACCTTTACCAACTA  90
V  92.7% (268/289)  IGHV5-10-1*01  6    ....................C.........A...............C.......C..........G...........G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  R  Y  S  P
                    Query_11445    91   CTGGATCAGCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGACCCTAGTGACTCTTATACCCGCTACAGTCC  180
V  92.7% (268/289)  IGHV5-10-1*01  96   ......................A.....................................T..................AA......C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  D  G  N  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  M  A  S  D  T  A
                    Query_11445    181  GTCCTTCGACGGCAACGTCACCATCTCAGTTGACAAGTCCATCAGTACTGCCTATTTGCAGTGGAGCAGCCTGATGGCCTCGGACACCGC  270
V  92.7% (268/289)  IGHV5-10-1*01  186  .......C.A...C...............C...............C........CC..................A...............  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          M  Y  Y  C  A  R  H  P  L  R  S  I  A  S  S  G  W  A  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11445    271  CATGTATTATTGTGCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCATGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  92.7% (268/289)  IGHV5-10-1*01  276  .........C.........-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD6-19*01    9    ------------------------------------------..........--------------------------------------  18
J  100.0% (34/34)   IGHJ4*02       15   ----------------------------------------------------------................................  46

                                          
                                          
                    Query_11445    361  AG  362
J  100.0% (34/34)   IGHJ4*02       47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_56241

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTCC	ATAGTGCTTACGAGTAC	GGGAAAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCTCCATAGTGCTTACGAGTACGGGAAATTGGTTCGACCCC	ASSIVLTSTGNWFDP	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	226	15	0	93.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  L  S  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_11446  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCCTCAGTAGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.8% (226/241)  IGHV4-59*01  50   .....TCC...A.......................A..................G.........G.........................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  T  T  N  C  N  P  S  L  E  S  R  V  T  I  S  L  D  T  S  K  N  
                    Query_11446  94   GGATTGGGTATATCTATTACAGTGGAACCACCAACTGCAATCCCTCCCTCGAGAGTCGAGTCACCATATCTTTAGACACGTCCAAGAACC  183
V  93.8% (226/241)  IGHV4-59*01  140  .........................G.G........A...C.........A...................AG..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  R  A  S  S  I  V  L  T  S  T  G  N  
                    Query_11446  184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACCGTGCGAGCTCCATAGTGCTTACGAGTACGGGAAATT  273
V  93.8% (226/241)  IGHV4-59*01  230  .....................................................T.......-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  82.4% (14/17)    IGHD5-12*01  7    -----------------------------------------------------------------......GC.....T...--------  23
J  100.0% (46/46)   IGHJ5*02     6    -----------------------------------------------------------------------------------------.  6

                                      ---------->                                  
                                      W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11446  274  GGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (46/46)   IGHJ5*02     7    .............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_273075

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*05                                                                                           339     2e-95
IGHD1-20*01                                                                                           10.3    120  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*05	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCCTACCAAAAGTACGAAA	GGTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCCTACCAAAAGTACGAAAGGTATTACTTTGACTCT	ARVPYQKYERYYFDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  D  Y  Y  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_11447  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTGACTACTATATGACGTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-11*05  47   ....................................C...............C....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  T  A  S  S  I  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11447  91   AGTGGGTTTCATTCATTACTGCTAGTAGTATTTACACAAACTACGCAGACTCTGTGAAGGGCCGATTCACCATTTCCAGAGACAACGCCA  180
V  93.6% (233/249)  IGHV3-11*05  137  ............A.....G.AG........G..........................................C................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  V  P  Y  Q  K  Y  E  
                    Query_11447  181  AGAATTCACTATATCTCCAGATGAACAGCCTGAGAGCCGAGGACACGGCCATCTATTACTGTGCGAGAGTTCCCTACCAAAAGTACGAAA  270
V  93.6% (233/249)  IGHV3-11*05  227  ....C.....G.....G..A..............................G.G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ---------------->                                  
                                      R  Y  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11447  271  GGTATTACTTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (5/5)     IGHD1-20*01  1    .....----------------------------------------------  5
J  95.7% (44/46)    IGHJ4*02     3    -----..........AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_56247

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           343     2e-96
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	N/A	TCCTTGCCCCCGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCCTTGCCCCCGAACTAC	ASLPPNY	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  T  T  H  T  M  K  W  V  R  Q  A  P  G  K  G  L  
                    Query_11448  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCACTACCCATACCATGAAGTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  94.7% (232/245)  IGHV3-21*01  47   ....................................C.....G..G.T...G......C.................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  T  S  S  S  T  Y  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11448  91   AGTGGGTCGCATCCATTACTAGTAGTAGTACCTACACATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.7% (232/245)  IGHV3-21*01  137  ........T.........G...........GT....T.....................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  L  P  P  N  Y  W  G  
                    Query_11448  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGTCCTTGCCCCCGAACTACTGGGGCC  270
V  94.7% (232/245)  IGHV3-21*01  227  ....................................................G............-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  100.0% (39/39)   IGHJ4*02     10   ------------------------------------------------------------------------------............  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_11448  271  AGGGAACCCTGGTCACCGTCTCCTCAG  297
J  100.0% (39/39)   IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_273073

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD3-16*01                                                                                           12.2    36    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACTTCTCCCCGGGTCCCCC	TGGGGG	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACTTCTCCCCGGGTCCCCCTGGGGGCCCTTTGACTCT	ARTLLPGSPWGPFDS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  A  V  R  R  P  G  E  S  L  T  I  S  C  Q  G  S  G  Y  R  V  P  T  H
                    Query_11449  1    GCAGCTGGTGCAGTCTGGAGCAGCGGTGAGAAGGCCCGGGGAGTCTCTGACGATTTCCTGTCAGGGTTCTGGATACAGAGTTCCCACCCA  90
V  92.4% (267/289)  IGHV5-51*01  6    .......................A.....A..A.................A...C......A................CT..A...G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_11449  91   TTGGATCGGGTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  92.4% (267/289)  IGHV5-51*01  96   C........C......................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  V  N  T  A  Y  L  Q  W  S  S  L  R  A  S  D  T  A
                    Query_11449  181  GTCCTTCCAAGGCCAGGTCACCATCTCTGCCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCAGTCTGAGGGCCTCGGACACCGC  270
V  92.4% (267/289)  IGHV5-51*01  186  ...........................A............A...G........................C....A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        T  Y  F  C  A  R  T  L  L  P  G  S  P  W  G  P  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11449  271  CACATATTTCTGTGCGAGAACACTTCTCCCCGGGTCCCCCTGGGGGCCCTTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  92.4% (267/289)  IGHV5-51*01  276  ..TG....A..........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------......--------------------------------------------  22
J  95.5% (42/44)    IGHJ4*02     5    ------------------------------------------------........AC................................  46

                                        
                                        
                    Query_11449  361  AG  362
J  95.5% (42/44)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_56245

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     3e-91
IGHD6-19*01                                                                                           14.1    8.9  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	GAAATAAGAGAGCAT	CAGTGCCTGCTAC	GGGGGGTGCCTCAACAT	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAAATAAGAGAGCATCAGTGCCTGCTACGGGGGGTGCCTCAACATACTATTTTGAATAC	VRNKRASVPATGGASTYYFEY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  A  M  S  W  V  R  Q  S  P  G  K  G  L  
                    Query_11450  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTTACCTTTAGCAGCTTTGCCATGAGCTGGGTCCGCCAGTCTCCGGGGAAGGGGCTGG  90
V  92.3% (227/246)  IGHV3-23*01  47   .........................C........C.............A......................G....A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  V  L  S  G  S  G  G  T  P  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_11450  91   AGTGGCTCTCAGTTCTTAGTGGCAGTGGTGGTACCCCATACTACGCAGACTCCGTGAGGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.3% (227/246)  IGHV3-23*01  137  .....G......C.A.......T..........G.A.....................A................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      R  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  A  A  V  Y  Y  C  V  R  N  K  R  A  S  V  P  
                    Query_11450  181  GGAACACGCTGTTTTTGCAGATGAACAGCCTGAGAGCCGAGGACGCGGCCGTTTATTACTGTGTGAGAAATAAGAGAGCATCAGTGCCTG  270
V  92.3% (227/246)  IGHV3-23*01  227  A...........A.C....A........................A.......A..........C..------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  84.6% (11/13)    IGHD6-19*01  9    ---------------------------------------------------------------------------------.....G...  17

                                      DR3-IMGT-------------------------->                                  
                                      A  T  G  G  A  S  T  Y  Y  F  E  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11450  271  CTACGGGGGGTGCCTCAACATACTATTTTGAATACTGGGGCAGGGGCACCCTGGTCACCGTCTCCTCAG  339
D  84.6% (11/13)    IGHD6-19*01  18   G...-----------------------------------------------------------------  21
J  89.6% (43/48)    IGHJ4*02     1    ---------------------....C.....C.........CA...A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_56244

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           353     1e-99
IGHD3-22*01                                                                                           19.9    0.17 
IGHJ3*01                                                                                              44.9    1e-08


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GAATTACGGGGC	GATAGAAGTGGTT	TCGATACTTTTGCGTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAATTACGGGGCGATAGAAGTGGTTTCGATACTTTTGCGTTT	AELRGDRSGFDTFAF	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	256	30	0	89.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  A  K  V  S  C  K  A  S  G  Y  S  F  S  S  H
                    Query_11451  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGCGAAGGTCTCCTGCAAGGCATCTGGATACAGTTTCAGCAGTCA  90
V  89.5% (256/286)  IGHV1-46*01  6    ..................G............................T......T......................CC....C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  H  W  V  R  Q  A  P  G  Q  G  I  E  R  M  G  M  F  N  P  G  A  G  S  A  I  S  A  Q
                    Query_11451  91   CTATATACACTGGGTGCGACAGGCCCCTGGACAGGGGATTGAGAGGATGGGAATGTTCAACCCTGGTGCTGGTAGCGCAATCTCCGCACA  180
V  89.5% (256/286)  IGHV1-46*01  96   ......G..........................A...C.....T..........AA........A...G.......A...G..A......  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  A  R  P  S  M  T  G  D  T  S  T  R  A  V  Y  M  E  L  S  G  L  R  S  D  D  T  A
                    Query_11451  181  GAGATTCCAGGCCAGACCCTCCATGACCGGGGACACGTCCACGAGGGCAGTCTACATGGAGCTGAGCGGCCTGAGATCTGACGACACGGC  270
V  89.5% (256/286)  IGHV1-46*01  186  ..AG.......G....GT.A........A................CA....................A.............G........  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  E  L  R  G  D  R  S  G  F  D  T  F  A  F  W  G  Q  G  T  L  V  S  V  S  S
                    Query_11451  271  CGTGTATTACTGTGCGGAATTACGGGGCGATAGAAGTGGTTTCGATACTTTTGCGTTTTGGGGCCAAGGGACGTTGGTCTCCGTCTCTTC  360
V  89.5% (256/286)  IGHV1-46*01  276  ................--------------------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                           
D  92.3% (12/13)    IGHD3-22*01  11   ----------------------------.....T.......-------------------------------------------------  23
J  90.6% (29/32)    IGHJ3*01     17   ----------------------------------------------------------..............AA.....A..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_217786

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           307     1e-85
IGHD3-16*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCGCATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCGCATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRRIDGYRDAFEI	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	222	26	0	89.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_11452  4    CCCTGAGACTCTCCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  89.5% (222/248)  IGHV4-61*01  50   .....TCC...A..........C.................C....G.AG.T..........C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S  
                    Query_11452  94   TGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCCA  183
V  89.5% (222/248)  IGHV4-61*01  140  ...A.........GT............G......CAC..A.........................G.CA....A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  R  I  D  G  Y  
                    Query_11452  184  AAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCGCATTGATGGTTATC  273
V  89.5% (222/248)  IGHV4-61*01  230  .G................A.................................G...............----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-16*02  24   ------------------------------------------------------------------------------------......  29

                                      ---------------->                                  
                                      R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_11452  274  GTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  324
D  100.0% (7/7)     IGHD3-16*02  30   .--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    -.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_217787

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           396     2e-112
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTGC	ARRIAVANTGHYFDC	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	271	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_11453  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCTTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  93.8% (271/289)  IGHV5-51*03  6    .........................................................C...................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_11453  91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  93.8% (271/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  R  S  I  T  T  A  Y  L  Q  W  S  I  L  Q  A  A  D  T  A
                    Query_11453  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAGGTCCATCACGACCGCCTACCTCCAGTGGAGCATCCTGCAGGCCGCGGACACCGC  270
V  93.8% (271/289)  IGHV5-51*03  186  ...............G...................A........GC...........G..........G....A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                               
                                        V  Y  C  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  C  W  G  Q  G  T  L  V  T  V  S  
                    Query_11453  271  CGTCTATTGCTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  359
V  93.8% (271/289)  IGHV5-51*03  276  .A.G....A..........----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............-------------------------------------------------------  16
J  97.8% (44/45)    IGHJ4*02     1    --------------------------------------------............A................................  45


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_217782

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD3-16*01                                                                                           10.3    115   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGAAAGA	GGGGG	CTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC	ARDQKEGAPDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	241	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11454  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (241/245)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11454  91   TGGATTGGGTATATCTTTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (241/245)  IGHV4-59*01  139  ................A.........................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  K  E  G  A  P  D  Y 
                    Query_11454  181  CAATTCTCCCTGAAACTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC  270
V  98.4% (241/245)  IGHV4-59*01  229  ..G...........G..................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   --------------------------------------------------------------------------.....-----------  22
J  100.0% (41/41)   IGHJ4*02     8    -----------------------------------------------------------------------------------.......  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11454  271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (41/41)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_229918

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           315     5e-88
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGTGTACGGAAATCAG	TATGATGGTAGTGGTT	CCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTGTACGGAAATCAGTATGATGGTAGTGGTTCCCCTGACTCC	ARGVYGNQYDGSGSPDS	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  S  A  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_11455  1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAGTGCTTACTACTGGAGTTGGGTCCGGCAGCCCCCAGGGAAGGGGCTGGAG  90
V  91.4% (222/243)  IGHV4-59*08  49   ...........................G..............AG............C...A......................A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  L  Y  Y  R  G  S  T  R  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  K 
                    Query_11455  91   TGGATTGGGAATCTGTATTACAGAGGTAGTACCAGATACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAG  180
V  91.4% (222/243)  IGHV4-59*08  139  .........T..A.C........T..G..C....AC....................................G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  E  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  Y  G  N  Q  Y  D  G 
                    Query_11455  181  CAATTCTCCCTGGAGGTGCGCTCTGTCACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGGGGTGTACGGAAATCAGTATGATGGT  270
V  91.4% (222/243)  IGHV4-59*08  229  ..G.........A..C..A.......G....................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.8% (15/16)    IGHD3-22*01  8    ---------------------------------------------------------------------------------......A..  16

                                      ----------------->                                  
                                       S  G  S  P  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11455  271  AGTGGTTCCCCTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  93.8% (15/16)    IGHD3-22*01  17   .......---------------------------------------------  23
J  97.6% (40/41)    IGHJ4*02     8    -----------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_229919

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           341     5e-96
IGHD2-2*01                                                                                            12.2    31   
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGCAATCAA	CAGCTG	N/A	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGCAATCAACAGCTGGATGGTTTTGATATG	AREGNQQLDGFDM	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_11456  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCCCCAGGGAGGGGGCTGG  90
V  93.6% (234/250)  IGHV3-48*03  47   ....................G....................................................T.......A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  G  N  G  G  R  N  I  Y  Y  R  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11456  91   AGTGGGTTTCATACATTGGAAATGGTGGTCGTAACATATACTACAGAGACTCTGTGAAGGGCCGGTTCACCATCTCCCGAGACAACGCCA  180
V  93.6% (234/250)  IGHV3-48*03  137  .................A.T.G.A.....A...C..........GC..................A............A............  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  G  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  G  N  Q  Q  L  D  
                    Query_11456  181  AGAACTCACTGTATCTGCAAATGAATGGCCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGCGAGAGAGGGCAATCAACAGCTGGATG  270
V  93.6% (234/250)  IGHV3-48*03  227  .........................CA.......................G...................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-2*01   19   --------------------------------------------------------------------------------......----  24
J  91.8% (45/49)    IGHJ3*02     2    --------------------------------------------------------------------------------------....  5

                                      ---------->                                  
                                      G  F  D  M  W  G  R  G  T  M  V  T  V  S  S  
                    Query_11456  271  GTTTTGATATGTGGGGCCGAGGGACGATGGTCACCGTCTCTTCAG  315
J  91.8% (45/49)    IGHJ3*02     6    C.........C.......A......A...................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_69618

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           396     2e-112
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ5*02                                                                                              69.9    4e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	ACAAAGGGGGGTG	ATTACTATGATACTAGTGG	CCTT	GACAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAACAAAGGGGGGTGATTACTATGATACTAGTGGCCTTGACACC	AGTKGGDYYDTSGLDT	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	271	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  M  V  S  C  K  A  S  G  D  I  F  I  N  Y
                    Query_11457  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGATGGTCTCCTGCAAGGCTTCTGGAGACATCTTCATTAATTA  90
V  93.8% (271/289)  IGHV1-69*01  6    ..................................................A.......................G..C.....GC.GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  C  V  G  G  I  I  P  L  F  G  T  T  N  Y  A  Q
                    Query_11457  91   TGGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGCGTGGGAGGGATCATCCCTCTCTTTGGTACAACAAACTACGCACA  180
V  93.8% (271/289)  IGHV1-69*01  96   ..C.....G....................................GA.................A...........G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  N  T  A  Y  M  V  L  S  S  L  R  S  E  D  T  A
                    Query_11457  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAACACAGCCTACATGGTGCTGAGCAGCCTAAGATCTGAAGACACGGC  270
V  93.8% (271/289)  IGHV1-69*01  186  ............................................G..............A............G........G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  G  T  K  G  G  D  Y  Y  D  T  S  G  L  D  T  W  G  Q  G  T  L  V  T  V  S
                    Query_11457  271  CGTGTATTACTGTGCGGGAACAAAGGGGGGTGATTACTATGATACTAGTGGCCTTGACACCTGGGGCCAGGGAACCCTGGTCACCGTCTC  360
V  93.8% (271/289)  IGHV1-69*01  276  ................A..-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  3    --------------------------------............G......---------------------------------------  21
J  97.4% (38/39)    IGHJ5*02     12   -------------------------------------------------------...C...............................  46

                                          
                                        S 
                    Query_11457  361  CTCA  364
J  97.4% (38/39)    IGHJ5*02     47   ....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_69619

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           12.2    33   
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GCCGCGAAAATCGGTCTTTGGACTACTTATCCC	TGGGGG	GGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCCGCGAAAATCGGTCTTTGGACTACTTATCCCTGGGGGGGGCGACTGGTTCGACCCC	ARGPRKSVFGLLIPGGGDWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  D  Y  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11458  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCGATTACTATTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (233/245)  IGHV4-34*01  49   .......................................AG.GGT..C..........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  G  A  T  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11458  91   TGGATTGGGGAAATCAATCATGGTGCAACGACCAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  .....................A...G..GC............C...............................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  K  S  V  F  G  L 
                    Query_11458  181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGCCGCGAAAATCGGTCTTTGGACTA  270
V  95.1% (233/245)  IGHV4-34*01  229  ....................C............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      -IMGT--------------------------->                                  
                                       L  I  P  G  G  G  D  W  F  D  P  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_11458  271  CTTATCCCTGGGGGGGGCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  337
D  100.0% (6/6)     IGHD3-16*01  17   --------......-----------------------------------------------------  22
J  97.9% (47/48)    IGHJ5*02     4    -------------------................................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_69616

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           338     5e-95
IGHD7-27*01                                                                                           18.0    0.63 
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCGACTTGAAC	AACTGGGGA	TGGGCAGGGGAGGGTGTTTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCGACTTGAACAACTGGGGATGGGCAGGGGAGGGTGTTTATGATGTC	ATDLNNWGWAGEGVYDV	261	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	22	2	0	91.7
FR2-IMGT	75	125	51	46	5	0	90.2
CDR2-IMGT	126	146	21	16	5	0	76.2
FR3-IMGT	147	260	114	104	10	0	91.2
CDR3-IMGT (germline)	261	264	4	4	0	0	100
Total	N/A	N/A	264	240	24	0	90.9


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  S  V  S  G  A  S  I  S  R  Y  Y  W  N  W  I  R  
                    Query_11459  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCAGTGTCTCTGGTGCCTCCATCAGTCGTTACTACTGGAACTGGATCCGGC  90
V  90.9% (240/264)  IGHV4-59*01  26   ................T.........................C...........G..........A............G...........  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  A  M  E  W  I  G  Y  T  Y  H  T  G  D  T  D  Y  N  P  S  L  R  N  R  V  A  
                    Query_11459  91   AGCCCCCAGGGAAGGCAATGGAGTGGATCGGATATACCTATCACACTGGGGACACCGACTACAACCCCTCCCTCAGGAATCGAGTCGCCA  180
V  90.9% (240/264)  IGHV4-59*01  116  ...............G.C..........T..G....T....T...G....AG....A..................A..G.......A...  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  M  D  A  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  D  
                    Query_11459  181  TATCAATGGACGCGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACGGCTGCGGACACGGCCGTATACTACTGTGCGACCGACT  270
V  90.9% (240/264)  IGHV4-59*01  206  .....G.A...A........................................C.................G..T..........------  289
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A        

                                      -----------CDR3-IMGT-------------------->                                  
                                      L  N  N  W  G  W  A  G  E  G  V  Y  D  V  W  G  Q  G  R  M  V  T  V  S  S  
                    Query_11459  271  TGAACAACTGGGGATGGGCAGGGGAGGGTGTTTATGATGTCTGGGGCCAAGGGAGAATGGTCACCGTCTCTTCAG  345
D  100.0% (9/9)     IGHD7-27*01  3    -----.........-------------------------------------------------------------  11
J  97.6% (40/41)    IGHJ3*01     10   ----------------------------------....................C....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_229910

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           304     1e-84
IGHD1-26*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCTAGACCAAGAGTATGAA	TGGGAGGTTCTAC	CACA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCTAGACCAAGAGTATGAATGGGAGGTTCTACCACATGACTCC	ARSLDQEYEWEVLPHDS	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	221	27	0	89.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  V  S  G  F  T  F  R  T  Y  V  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11460  1    GGTCCCTGAGACTCTCCTGTGTAGTGTCTGGATTCACATTCAGAACCTATGTCATGAACTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  89.1% (221/248)  IGHV3-21*01  47   .....................C..CC...........C.....T.G....AG........................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  P  S  G  N  Y  V  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11460  91   AGTGGGTCTCATCCATTAGTCCTAGCGGAAATTATGTACACTATGTGGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  89.1% (221/248)  IGHV3-21*01  137  ....................AG...TA.T.G...CA..T....C.CA...........................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  K  S  L  Y  L  E  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  S  L  D  Q  E  Y  E  
                    Query_11460  181  AGAAGTCACTGTATCTGGAAATGGACAGCCTGAGAGTCGAGGACACGGCTGTTTATTATTGTGCGAGAAGCCTAGACCAAGAGTATGAAT  270
V  89.1% (221/248)  IGHV3-21*01  227  ....C............C.....A............C...............G.....C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.6% (11/13)    IGHD1-26*01  8    -----------------------------------------------------------------------------------------.  8

                                      GT-------------------->                                  
                                      W  E  V  L  P  H  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11460  271  GGGAGGTTCTACCACATGACTCCTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  327
D  84.6% (11/13)    IGHD1-26*01  9    .....C.A....---------------------------------------------  20
J  95.1% (39/41)    IGHJ4*02     8    ----------------.....A.....................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_229911

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            361     4e-102
IGHD3-9*01                                                                                            29.5    2e-04 
IGHJ5*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGCGCTGAA	GATTTTTTGACTGGTTAT	AATG	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCGCTGAAGATTTTTTGACTGGTTATAATGCC	ARGGAEDFLTGYNA	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11461  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGCTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-7*01   47   .....................................................A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  I  Y  Y  V  D  S  V  K  G  R  F  A  M  S  R  D  N  A  
                    Query_11461  91   AGTGGGTGGCCAACATCAAGCAAGATGGAAGTGAGATATACTATGTGGACTCTGTGAAGGGCCGATTCGCCATGTCCAGAGACAACGCCA  180
V  96.4% (240/249)  IGHV3-7*01   137  ................A...................A...............................A....C................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  P  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  A  E  D  F  L  
                    Query_11461  181  AGAACTCTCCGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGGAGGCGCTGAAGATTTTTTGA  270
V  96.4% (240/249)  IGHV3-7*01   227  .......A.T..........................................G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD3-9*01   8    --------------------------------------------------------------------------------...A......  17

                                      ------------->                                  
                                      T  G  Y  N  A  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11461  271  CTGGTTATAATGCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  94.4% (17/18)    IGHD3-9*01   18   ........----------------------------------------  25
J  100.0% (36/36)   IGHJ5*02     16   ------------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_229916

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           400     9e-114
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	272	16	0	94.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_11462  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  94.4% (272/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_11462  91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGATTCTGATACCAGATACAGCCC  180
V  94.4% (272/288)  IGHV5-51*01  96   .....................G.T..........................G..............G...C....................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  A  T  A
                    Query_11462  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGCCACCGC  270
V  94.4% (272/288)  IGHV5-51*01  186  ...............G.........................T.........................A...............A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11462  271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  94.4% (272/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_229917

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           369     2e-104
IGHD3-16*01                                                                                           41.1    8e-08 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GCCACACTGCA	TATGATTACGTTTCGGGGAGTTAT	TTCGTAAGGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGCCACACTGCATATGATTACGTTTCGGGGAGTTATTTCGTAAGGGGCTACTTAGACAAG	ATGHTAYDYVSGSYFVRGYLDK	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	263	27	0	90.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  V  S  G  D  T  F  S  G  Y
                    Query_11463  1    GCAGCTGGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGTCTCTGGAGACACCTTCAGCGGCTA  90
V  90.7% (263/290)  IGHV1-69*01  6    ..................G.....G........................................CT.......G..........A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  G  I  I  P  I  F  G  T  A  D  Y  T  Q
                    Query_11463  91   TGCTATCAACTGGGTGCGCCAGGCCCCTGGACAAGGACTTGAGTGGGTGGGGGGAATCATCCCTATTTTTGGTACTGCAGACTACACACA  180
V  90.7% (263/290)  IGHV1-69*01  96   ........G.........A.................G.........A....A..G...........C........A...A.....G....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  Y  L  G  R  V  T  I  T  A  D  Q  S  T  S  T  S  Y  M  E  L  N  S  L  R  S  E  D  T  A
                    Query_11463  181  GAAGTACCTGGGCAGGGTCACTATTACCGCGGACCAATCCACGAGCACAAGCTACATGGAACTGAACAGCCTGAGGTCTGAGGACACGGC  270
V  90.7% (263/290)  IGHV1-69*01  186  .....T..A......A.....G............G..............GC.........G....G.........A..............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------------CDR3-IMGT--------------------------->           
                                        V  Y  Y  C  A  T  G  H  T  A  Y  D  Y  V  S  G  S  Y  F  V  R  G  Y  L  D  K  W  G  Q  G
                    Query_11463  271  CGTGTATTACTGTGCGACAGGCCACACTGCATATGATTACGTTTCGGGGAGTTATTTCGTAAGGGGCTACTTAGACAAGTGGGGCCAGGG  360
V  90.7% (263/290)  IGHV1-69*01  276  .................G..----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  95.8% (23/24)    IGHD3-16*01  5    -------------------------------.............G..........-----------------------------------  28
J  93.6% (44/47)    IGHJ4*02     2    ------------------------------------------------------------------......T...T.C...........  25

                                                             
                                        T  L  V  T  V  S  S  
                    Query_11463  361  AACCCTGGTCACCGTCTCCTCAG  383
J  93.6% (44/47)    IGHJ4*02     26   .......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_229914

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           310     1e-86
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGCTCCCCCCTCAC	TATATCAATGGCTGG	GACT	TTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGCTCCCCCCTCACTATATCAATGGCTGGGACTTTTGGCTTC	ACSPLTISMAGTFGF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	219	21	0	91.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  T  P  G  K  E  L  E 
                    Query_11464  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATAAGTAGTTATTACTGGAACTGGATCCGGCAGACCCCGGGGAAGGAACTGGAG  90
V  91.2% (219/240)  IGHV4-59*08  49   ......................................C........C.......G.............C....A.......G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  T  G  S  A  N  Y  N  P  S  L  K  S  R  V  S  M  S  V  G  S  S  K  N 
                    Query_11464  91   TGGATTGGGTATGTCTATTACACTGGGAGCGCCAACTACAACCCCTCCCTCAAGAGTCGAGTCAGCATGTCGGTGGGCTCGTCCAAGAAT  180
V  91.2% (219/240)  IGHV4-59*08  139  ............A.........G.......A.................................C...A..A..A.A.A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  S  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  C  S  P  L  T  I  S  M  A  G 
                    Query_11464  181  CAGTTCTCCCTGAGTCTGAGTTCTGTGACCGCCGCAGACACGGCCATCTATTACTGTGCGTGCTCCCCCCTCACTATATCAATGGCTGGG  270
V  91.2% (219/240)  IGHV4-59*08  229  .............AG.....C........................G.G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  86.7% (13/15)    IGHD6-19*01  4    --------------------------------------------------------------------------....G..G.......-  18

                                      ----------->                                  
                                       T  F  G  F  W  G  Q  G  S  L  V  R  V  S  S  
                    Query_11464  271  ACTTTTGGCTTCTGGGGCCAGGGATCCCTGGTCCGCGTCTCCTCAG  316
J  88.4% (38/43)    IGHJ4*02     6    ---....A..A.............A........AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_229915

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q 
                    Query_11465  1    ACCCTGTCCCTCACCTGCACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAA  90
V  90.6% (222/245)  IGHV4-59*01  49   ....................T..........................C........C............C.................G.G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  I  S  I  S  V  D  T  S  K  N 
                    Query_11465  91   TGGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAATAAGCATATCAGTGGACACGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  ...A....G.....C...T....T....G......C..............C.........G.C.C.........A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E 
                    Query_11465  181  CAGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAG  270
V  90.6% (222/245)  IGHV4-59*01  229  ...T.........AG..G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  1    -----------------------------------------------------------------------------............-  12

                                      -------------->                                  
                                       D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_11465  271  GATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  319
J  92.5% (37/40)    IGHJ4*02     9    ---------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_352019

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         352     3e-99
IGHD2-15*01                                                                                           18.0    0.64 
IGHJ6*02                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCACCTT	TATTGTAGT	TATGCCAGTATCGGCTGCTTGACCGGATGTTGCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGACCACCTTTATTGTAGTTATGCCAGTATCGGCTGCTTGACCGGATGTTGCCACTACTACGGTATGGACGTC	VRDHLYCSYASIGCLTGCCHYYGMDV	243	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	56	27	26	1	0	96.3
FR2-IMGT	57	107	51	51	0	0	100
CDR2-IMGT	108	128	21	21	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	247	236	11	0	95.5


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  R  L  S  C  A  V  S  G  Y  S  V  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  
                    Query_11466    4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTTACTCCGTCAGCAGTGGTTACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTGG  93
V  95.5% (236/247)  IGHV4-38-2*02  50   .....TCC...A.....A.................A......................................................  139
                                           L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  
                    Query_11466    94   AGTGGATTGGGAGTATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGA  183
V  95.5% (236/247)  IGHV4-38-2*02  140  ......................................................................A...................  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><------------------------------
                                        N  Q  F  S  L  N  L  R  S  M  T  A  A  D  T  A  V  Y  Y  C  V  R  D  H  L  Y  C  S  Y  A  
                    Query_11466    184  ACCAGTTCTCCCTGAACCTGAGGTCTATGACCGCCGCAGACACGGCCGTGTATTACTGTGTGAGAGACCACCTTTATTGTAGTTATGCCA  273
V  95.5% (236/247)  IGHV4-38-2*02  230  ................G.....C...G.................................C......-----------------------  296
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (9/9)     IGHD2-15*01    5    --------------------------------------------------------------------------.........-------  13

                                        ----CDR3-IMGT--------------------------------->                                 
                                        S  I  G  C  L  T  G  C  C  H  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11466    274  GTATCGGCTGCTTGACCGGATGTTGCCACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  353
J  100.0% (53/53)   IGHJ6*02       10   ---------------------------.....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_352012

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           333     1e-93
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCCCCCTCCTGTG	GGTGACTAC	GTCAGCGGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCCCCCTCCTGTGGGTGACTACGTCAGCGGCCTTGACTAT	AKPPPVGDYVSGLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  S  T  S  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11467  1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCATGTTCAGCACCTCTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.1% (230/247)  IGHV3-30*18  47   ......................A.............CC.....T.G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11467  91   AGTGGGTGGCAGTCATTTCATATGATGGAAGTAATACGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGGGACAATTCCA  180
V  93.1% (230/247)  IGHV3-30*18  137  .............T..A...................AA.........................................A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  S  L  Q  M  S  S  L  R  P  E  D  S  G  V  Y  Y  C  A  K  P  P  P  V  G  D  Y  
                    Query_11467  181  AGAACACCCTGTCTCTGCAAATGAGCAGCCTGAGACCTGAGGACTCGGGTGTGTATTACTGTGCGAAGCCCCCTCCTGTGGGTGACTACG  270
V  93.1% (230/247)  IGHV3-30*18  227  .......G....A...........A..........G........A...C..................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD4-17*01  8    --------------------------------------------------------------------------------.........-  16

                                      ---------------->                                  
                                      V  S  G  L  D  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_11467  271  TCAGCGGCCTTGACTATTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  321
J  95.2% (40/42)    IGHJ4*02     7    ---------.......C................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_352013

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q 
                    Query_11468  1    ACCCTGTCCCTCACCTGCACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAA  90
V  91.0% (223/245)  IGHV4-59*01  49   ....................T..........................C........C............C.................G.G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_11468  91   TGGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAAC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A....G.....C...T....T....G......C..............C...........C.C.........A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E 
                    Query_11468  181  CAGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAG  270
V  91.0% (223/245)  IGHV4-59*01  229  ...T.........AG..G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  1    -----------------------------------------------------------------------------............-  12

                                      -------------->                                  
                                       D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_11468  271  GATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  319
J  92.5% (37/40)    IGHJ4*02     9    ---------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_352010

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           333     1e-93
IGHD2-15*01                                                                                           31.5    5e-05
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGAGTTC	TTGTACTGGTGGTAGGTGCTAC	ATGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGAGTTCTTGTACTGGTGGTAGGTGCTACATGTTCTACTACTACGCTGTGGACGTC	AGSSCTGGRCYMFYYYAVDV	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	248	3	3	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  N  V  S  G  V  S  I  S  T  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_11469  4    CCCTGAGACTCTCCTGCAATGTCTCTGGTGTCTCCATCAGTACTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  93.5% (229/245)  IGHV4-39*01  50   .....TCC...A......C...........G.........C.G..G..........................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  M  G  S  I  Y  H  S  G  S  A  F  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  T  S  
                    Query_11469  94   TGGAGTGGATGGGGAGTATCTATCATAGTGGGAGCGCCTTCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCCGTAGACACGTCCA  183
V  93.5% (229/245)  IGHV4-39*01  140  ..........T............T...........A...A................A................A................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  C  T  G  G  R  
                    Query_11469  184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGGGGAGTTCTTGTACTGGTGGTAGGT  273
V  93.5% (229/245)  IGHV4-39*01  230  .................................................................-------------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  90.9% (20/22)    IGHD2-15*01  7    -------------------------------------------------------------------------.....G.........C.  23

                                      R3-IMGT------------------------>                                 
                                      C  Y  M  F  Y  Y  Y  A  V  D  V  W  G  Q  G  T  T  I  T  V  S  S 
                    Query_11469  274  GCTACATGTTCTACTACTACGCTGTGGACGTCTGGGGCCAAGGGACCACGATCACCGTCTCCTCA  338
D  90.9% (20/22)    IGHD2-15*01  24   .....------------------------------------------------------------  28
J  94.5% (52/55)    IGHJ6*02     8    ----------...........G.A..........................G..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_352011

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           277     9e-77
IGHD6-19*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTGGTCGTC	AGCAGTGGCTGG	CCCTGGACGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGGTCGTCAGCAGTGGCTGGCCCTGGACGGC	ATGRQQWLALDG	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	13	8	0	61.9
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	209	32	0	86.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  F  G  E  S  F  T  S  H  F  W  I  W  V  R  Q  T  P  G  K  G  L  E 
                    Query_11470  1    ACCCTGTCCCTCACCTGCGCTGTCTTTGGTGAGTCCTTCACTAGTCACTTCTGGATCTGGGTCCGCCAGACCCCCGGGAAGGGGCTGGAG  90
V  86.7% (209/241)  IGHV4-34*01  49   .........................A.....G........G.G..T...A.....G....A........C....A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  S  N  Q  R  Q  R  S  K  Y  N  P  S  L  K  S  R  V  T  I  L  G  N  T  S  K  N 
                    Query_11470  91   TGGATTGGGGAAAGTAATCAGCGTCAAAGAAGCAAATACAATCCGTCCCTAAAGAGTCGAGTCACCATCTTAGGAAACACGTCCAAGAAT  180
V  86.7% (209/241)  IGHV4-34*01  139  .............TC.....TA..GG...C.C...C.....C........C.................A.C..T.G.............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  R  Q  Q  W  L  A  L  D 
                    Query_11470  181  CAGTTCTCTCTGAGGCTCAATTCTGTGACCGCCGCGGACACGGCTGTGTATTATTGTGCGACTGGTCGTCAGCAGTGGCTGGCCCTGGAC  270
V  86.7% (209/241)  IGHV4-34*01  229  ........C....A...G.GC................................C.......-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (12/12)   IGHD6-19*01  7    ----------------------------------------------------------------------............--------  18

                                      -->                                  
                                       G  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11470  271  GGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (35/35)   IGHJ4*02     14   --...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_352016

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACCTTGACTAC	ARRGYSYGYYYLDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	240	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11471  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.8% (240/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_11471  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCTATAGACACGTCCAAGAAC  180
V  98.8% (240/243)  IGHV4-59*01  139  .......................................................................AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_11471  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  98.8% (240/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11471  271  CTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    T..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_352017

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           293     2e-81
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CTGGAGGGGGC	TTCGGGAAGTTATTATAAC	GGACGGCGGGGGCT	TATCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACTGGAGGGGGCTTCGGGAAGTTATTATAACGGACGGCGGGGGCTTATCGACGTC	ARLEGASGSYYNGRRGLIDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	218	31	0	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  F  S  T  T  D  Y  W  V  W  I  R  Q  T  P  G  K  G 
                    Query_11472  1    ACCCTGTCCCTCACCTGCACCGTCTCTGGCGGCTCCATCTTCAGTACTACTGACTACTGGGTCTGGATCCGCCAGACCCCCGGGAAGGGG  90
V  87.6% (218/249)  IGHV4-39*02  49   ....................T........T.........AG.....G..G.T.........G.............C....A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  A  I  H  H  T  G  R  T  Y  Y  N  P  S  L  E  S  R  S  T  M  S  A  D  T  S 
                    Query_11472  91   CTGGAGTGGATTGGGGCTATTCATCACACTGGGAGAACCTACTACAACCCGTCCCTCGAGAGTCGATCCACCATGTCCGCAGACACATCC  180
V  87.6% (218/249)  IGHV4-39*02  139  ...............AG...CT..T.T.G......C.....................A........GT......A....T......G...  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       S  N  H  F  S  L  N  L  R  S  V  T  A  A  D  T  S  V  Y  Y  C  A  R  L  E  G  A  S  G  S 
                    Query_11472  181  AGCAACCACTTCTCCCTGAACCTGAGGTCTGTGACCGCCGCAGACACGTCTGTTTATTACTGTGCGCGACTGGAGGGGGCTTCGGGAAGT  270
V  87.6% (218/249)  IGHV4-39*02  229  .AG.................G.....C.....................G....G............A..---------------------  297
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.7% (18/19)    IGHD3-10*01  13   --------------------------------------------------------------------------------......G...  22

                                      DR3-IMGT------------------------>                                 
                                       Y  Y  N  G  R  R  G  L  I  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11472  271  TATTATAACGGACGGCGGGGGCTTATCGACGTCTGGGGCCAAGGGACCACGGTCACCGTGTCCTCA  336
D  94.7% (18/19)    IGHD3-10*01  23   .........---------------------------------------------------------  31
J  95.3% (41/43)    IGHJ6*02     20   -----------------------...G................................C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_352015

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_11473  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG....T..............A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11473  91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.4% (228/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_11473  181  CAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  ...............C...G...........................G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_11473  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_297410

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            349     2e-98
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGGC	GGGGGA	CCTACCGTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGCGGGGGACCTACCGTGTTTGACTAC	ARGGGGPTVFDY	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  S  K  W  *  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_11474  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGTAGTAAATGGTGAACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.1% (235/247)  IGHV4-4*02   49   ...............................G..................C.....G.G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  Y  H  S  G  S  S  N  Y  S  P  S  P  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_11474  91   GAGTGGATTGGGGATATCTATCATAGTGGGAGCTCCAACTACAGCCCGTCCCCCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  95.1% (235/247)  IGHV4-4*02   139  ..............A..................A.........A........T.A...................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  G  P  T  V  F 
                    Query_11474  181  AATCAGTTCTCCCTGAAGCTGACATCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCGGCGGGGGACCTACCGTGTTT  270
V  95.1% (235/247)  IGHV4-4*02   229  ..C...................GC...........................................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------------......------------  23
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11474  271  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (43/43)   IGHJ4*02     9    ........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_297411

Length=410
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     2e-124
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGCCTACTTTCTTAGTTGGGGTTACTCTGGTA	GTATAACAGCAGCTGG	CGAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTAC	ARHAYFLSWGYSGSITAAGEIDY	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	285	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  A  T  Y
                    Query_11475  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTGCCACCTA  90
V  97.9% (285/291)  IGHV5-51*01  6    ....................................C........................................G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_11475  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  97.9% (285/291)  IGHV5-51*01  96   ............................................................................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_11475  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  97.9% (285/291)  IGHV5-51*01  186  .........................................................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        M  Y  Y  C  A  R  H  A  Y  F  L  S  W  G  Y  S  G  S  I  T  A  A  G  E  I  D  Y  W  G  Q
                    Query_11475  271  CATGTATTACTGTGCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTACTGGGGCCA  360
V  97.9% (285/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  93.8% (15/16)    IGHD6-13*01  3    -----------------------------------------------------.....G..........---------------------  18
J  100.0% (42/42)   IGHJ4*02     7    --------------------------------------------------------------------------................  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_11475  361  GGGAACCCTGGTCACCGTCTCCTCAG  386
J  100.0% (42/42)   IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40183344


Query= Query_297416

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD5-18*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGTCATGGTTAC	GGAGGAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGTCATGGTTACGGAGGAATTGACTAC	ARYSHGYGGIDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	233	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11476  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (233/243)  IGHV4-59*01  49   ...............................G........G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  S  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  K  N 
                    Query_11476  91   TGGATTGGTTATATCTACTACCGTGGGAGCTCCAACTCCAACCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.9% (233/243)  IGHV4-59*01  139  ........G........T...A........A......A......................G.............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  G  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  I  D 
                    Query_11476  181  CAGTTCTCCCTGAGGCTGGGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGTCATGGTTACGGAGGAATTGAC  270
V  95.9% (233/243)  IGHV4-59*01  229  .............A....A............................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  86.7% (13/15)    IGHD5-18*01  6    ---------------------------------------------------------------.....CT........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11476  271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_297417

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           445     2e-127
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAGGAAAGTGGATTCAC	GATAGTAGTGGTTAT	CAAA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGAAAGTGGATTCACGATAGTAGTGGTTATCAAAACTACGGTATGGACGTC	ARLGKWIHDSSGYQNYGMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	287	2	0	99.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  G  F  T  N  Y
                    Query_11477  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGGCTTTACCAACTA  90
V  99.3% (287/289)  IGHV5-51*03  6    ............................................................................A.........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_11477  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  99.3% (287/289)  IGHV5-51*03  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11477  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  99.3% (287/289)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  Y  C  A  R  L  G  K  W  I  H  D  S  S  G  Y  Q  N  Y  G  M  D  V  W  G  Q  G  T  T
                    Query_11477  271  CATGTATTACTGTGCGAGACTAGGAAAGTGGATTCACGATAGTAGTGGTTATCAAAACTACGGTATGGACGTCTGGGGCCAAGGGACCAC  360
V  99.3% (287/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (15/15)   IGHD3-22*01  11   -------------------------------------...............--------------------------------------  25
J  100.0% (50/50)   IGHJ6*02     13   --------------------------------------------------------..................................  46

                                                      
                                        V  T  V  S  S 
                    Query_11477  361  GGTCACCGTCTCCTCA  376
J  100.0% (50/50)   IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_297414

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD2-2*01                                                                                            21.8    0.040
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTGGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTGGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCGSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_11478  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_11478  91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  G  S  T  S  C  Y 
                    Query_11478  181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTGGTAGCACCAGCTGCTAC  270
V  91.4% (223/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.2% (15/17)    IGHD2-2*01   8    ---------------------------------------------------------------------...A....T........----  24
J  88.5% (46/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_11478  271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  318
J  88.5% (46/52)    IGHJ6*02     15   ...GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_297415

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           339     2e-95
IGHD3-16*01                                                                                           12.2    33   
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GCCGCGAAAATCGGTCTTTGGACTACTTATCCC	TGGGGG	GGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCCGCGAAAATCGGTCTTTGGACTACTTATCCCTGGGGGGGGCGACTGGTTCGACCCC	ARGPRKSVFGLLIPGGGDWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11479  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCGATTACCATTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  94.3% (231/245)  IGHV4-34*01  49   .......................................AG.GGTT.C..........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  G  A  T  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S  K  D 
                    Query_11479  91   TGGATTGGGGAAATCAATCATGGTGCAACGACCAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGGAC  180
V  94.3% (231/245)  IGHV4-34*01  139  .....................A...G..GC............C............................................A..  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  K  S  V  F  G  L 
                    Query_11479  181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGCCGCGAAAATCGGTCTTTGGACTA  270
V  94.3% (231/245)  IGHV4-34*01  229  ....................C............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         

                                      -IMGT--------------------------->                                  
                                       L  I  P  G  G  G  D  W  F  D  P  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_11479  271  CTTATCCCTGGGGGGGGCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  337
D  100.0% (6/6)     IGHD3-16*01  17   --------......-----------------------------------------------------  22
J  97.9% (47/48)    IGHJ5*02     4    -------------------................................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_279683

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           403     1e-114
IGHD3-16*01                                                                                           12.2    35    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATGTCACC	TGGGGG	TATTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATGTCACCTGGGGGTATTCTGACTAC	ARYVTWGYSDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	273	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y 
                    Query_11480  2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTAT  91
V  94.8% (273/288)  IGHV1-18*01  7    ...................C.................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  T  Y  N  H  N  T  H  F  A  Q 
                    Query_11480  92   GCCATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACTTACAATCATAACACACACTTTGCACAG  181
V  94.8% (273/288)  IGHV1-18*01  97   .GT....G..................................................G.G........GG.......A...A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_11480  182  AAACTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGTACCGCCTACATGGAACTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (273/288)  IGHV1-18*01  187  ..G.........................................C..A...........G..............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  Y  V  T  W  G  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_11480  272  GTGTATTACTGTGCGAGATATGTCACCTGGGGGTATTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  350
V  94.8% (273/288)  IGHV1-18*01  277  ..................-------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD3-16*01  17   ---------------------------......----------------------------------------------  22
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------..................................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_279682

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           325     3e-91
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGGGAA	AACGAC	TGGGATCGTAGGTGGTCCGGT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGGGAAAACGACTGGGATCGTAGGTGGTCCGGTTTTCACTTC	ASRENDWDRRWSGFHF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11481  1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.0% (225/242)  IGHV4-59*08  49   ....................T......................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       L  I  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S  R  N 
                    Query_11481  91   TTGATTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGTCGACTCACCATCTCAGTAGACACGTCGAGGAAC  180
V  93.0% (225/242)  IGHV4-59*08  139  .G......G...A........A........A.....................A.......G.......A..............C.A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  S  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  N  D  W  D  R  R  W 
                    Query_11481  181  CAGTTCTCCCTGAGCGTGAACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCGAGCCGGGAAAACGACTGGGATCGTAGGTGG  270
V  93.0% (225/242)  IGHV4-59*08  229  .............AGC...G.........C................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD1-1*01   12   ---------------------------------------------------------------------......---------------  17

                                      -------------->                                  
                                       S  G  F  H  F  W  G  P  G  T  L  V  T  V  S  S  
                    Query_11481  271  TCCGGTTTTCACTTCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  319
J  93.0% (40/43)    IGHJ4*02     6    ------...G...A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_151066

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           329     3e-92
IGHD3-22*01                                                                                           21.8    0.040
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGAA	AGTGGTTATTA	N/A	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGAAAGTGGTTATTATGAAGCTTTTGATATG	ARSESGYYEAFDM	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  L  S  N  Y  D  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11482  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCCTCAGCAACTATGATATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.3% (229/248)  IGHV3-30*04  47   ...................................A..T....T.G.....C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  I  I  S  Y  D  G  G  N  K  N  Y  A  D  S  V  R  G  R  F  T  L  S  R  D  N  S  
                    Query_11482  91   AGTGGGTATCAATTATATCATATGATGGAGGAAATAAAAATTACGCAGACTCCGTGAGGGGCCGATTCACCTTGTCCAGAGACAATTCCA  180
V  92.3% (229/248)  IGHV3-30*04  137  .......GG..G.................A.T......T.C................A.............A.C................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  F  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  E  S  G  Y  Y  E  
                    Query_11482  181  AGAACACGCTGTTTCTGCAAATGAACAACCTGCGCGCTGAGGACACGGCTGTGTATTACTGTGCGAGATCGGAAAGTGGTTATTATGAAG  270
V  92.3% (229/248)  IGHV3-30*04  227  ............A..............G....A.A.................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-22*01  17   --------------------------------------------------------------------------...........-----  27
J  88.0% (44/50)    IGHJ3*02     1    -------------------------------------------------------------------------------------...T.  5

                                      ---------->                                  
                                      A  F  D  M  W  G  P  G  T  V  V  T  V  A  S  
                    Query_11482  271  CTTTTGATATGTGGGGCCCAGGGACAGTGGTCACCGTCGCCTCAG  315
J  88.0% (44/50)    IGHJ3*02     6    ..........C.......A.......A...........T.T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_279680

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           325     3e-91
IGHD3-22*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTGA	ATAGTAGTGGTT	TTCCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGAATAGTAGTGGTTTTCCTCTGGACGGTATGGACGTC	ARESFLNSSGFPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	29	27	27	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  K  W  V  R  Q  A  P  G  K  G  L  E 
                    Query_11483  3    TCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAAATGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAG  92
V  91.9% (228/248)  IGHV3-21*01  49   ..........................................AG............C.................................  138
                                       S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E 

                                      -----------><-------CDR2-IMGT------><----------------------------------------------------F
                                       W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  K 
                    Query_11483  93   TGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCAAG  182
V  91.9% (228/248)  IGHV3-21*01  139  ..................AG.AG..G..G.T....A........A.......................................G.....  228
                                       W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K 

                                      R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                       N  S  V  F  L  Q  I  N  S  L  R  A  D  D  T  A  V  Y  Y  F  A  R  E  S  F  L  N  S  S  G 
                    Query_11483  183  AATTCAGTGTTTCTGCAAATTAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTTTGCGAGAGAAAGTTTCTTGAATAGTAGTGGT  272
V  91.9% (228/248)  IGHV3-21*01  229  ..C...C...A.........G.................G...........G.......G.........----------------------  296
                                       N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (12/12)   IGHD3-22*01  12   -------------------------------------------------------------------------------...........  22

                                      GT--------------------->                                 
                                       F  P  L  D  G  M  D  V  W  G  Q  G  A  T  V  T  F  A  S 
                    Query_11483  273  TTTCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGGCCACGGTCACCTTCGCCTCA  329
D  100.0% (12/12)   IGHD3-22*01  23   .--------------------------------------------------------  23
J  93.6% (44/47)    IGHJ6*02     16   ----------..........................A...........G..T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_151060

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           353     9e-100
IGHD3-3*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	235	9	0	96.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_11484  4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  96.3% (235/244)  IGHV4-34*01  50   .....TCC...A....................................A.........................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  P  K  S  R  V  T  I  S  A  D  T  S  K  N  
                    Query_11484  94   GGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCCCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAACC  183
V  96.3% (235/244)  IGHV4-34*01  140  ................................................T.......................T.................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  K  L  G  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V  
                    Query_11484  184  AGTTCTCCCTGAAGCTGGGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCG  273
V  96.3% (235/244)  IGHV4-34*01  230  .................A............................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  100.0% (7/7)     IGHD3-3*01   9    --------------------------------------------------------------------------------.......---  15

                                      ------------->                                  
                                      A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11484  274  CCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (43/43)   IGHJ4*02     6    -----...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_279686

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           347     7e-98
IGHD3-10*01                                                                                           10.3    117  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACGAGCGGTC	TCGGG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACGAGCGGTCTCGGGATTGACTAC	ARDTSGLGIDY	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  T  W  I  R  Q  N  P  G  K  G  
                    Query_11485  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATTAGCAGTGGTTCTTACTACTGGACCTGGATCCGCCAGAACCCAGGGAAGGGCC  93
V  94.4% (236/250)  IGHV4-31*03  50   .....TCC...A.........................C.........GG...........G.............C...............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  R  S  G  S  T  Y  Y  N  P  S  L  K  S  R  I  T  I  S  I  D  T  S  
                    Query_11485  94   TGGAGTGGATTGGGTACATCTATCGCAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAATTACCATATCAATAGACACGTCTA  183
V  94.4% (236/250)  IGHV4-31*03  140  .......................TA........................................G...........G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  S  G  L  G  I  
                    Query_11485  184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGATACGAGCGGTCTCGGGATTG  273
V  94.4% (236/250)  IGHV4-31*03  230  ....................................................G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   ---------------------------------------------------------------------------------.....----  18
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11485  274  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (42/42)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_151062

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           322     2e-90
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_11486  1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_11486  91   CTAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-61*08  139  ..G..................T..T................C.................G.......TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N 
                    Query_11486  181  AGGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAAC  270
V  91.2% (228/250)  IGHV4-61*08  229  .A.................A.....GC..........................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G..G.....G.  22

                                      3-IMGT----------------------->                                  
                                       C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11486  271  TGCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  86.4% (19/22)    IGHD2-15*01  23   ......----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_279684

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           389     2e-110
IGHD6-6*01                                                                                            21.8    0.046 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCGGGCGAGG	GTATGGCAGCTCGT	T	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCGGGCGAGGGTATGGCAGCTCGTTCTACTTTGACTCC	ATGRGYGSSFYFDS	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	268	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N  N  H
                    Query_11487  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGGGGCACCTTCAACAATCA  90
V  93.4% (268/287)  IGHV1-69*06  6    ..................G...............................................T.....A..........G..GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  M  F  A  T  A  S  Y  A  Q
                    Query_11487  91   TGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGCCTTGAGTGGATGGGAGGGATCATCCCTATGTTTGCTACAGCAAGTTACGCACA  180
V  93.4% (268/287)  IGHV1-69*06  96   ........G...........................G.............................C....G........AC........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  Q  G  R  V  T  I  T  A  D  K  S  T  R  T  V  Y  M  D  L  S  S  L  R  S  G  D  T  A
                    Query_11487  181  GAACTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGCGCACAGTCTACATGGACCTGAGCAGCCTGAGATCTGGGGACACGGC  270
V  93.4% (268/287)  IGHV1-69*06  186  ...G.......................................A......C.........G...................A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  T  G  R  G  Y  G  S  S  F  Y  F  D  S  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_11487  271  CGTCTATTACTGTGCGACCGGGCGAGGGTATGGCAGCTCGTTCTACTTTGACTCCTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  359
V  93.4% (268/287)  IGHV1-69*06  276  ...G.............------------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                          
D  92.9% (13/14)    IGHD6-6*01   3    ---------------------------....A.........------------------------------------------------  16
J  95.7% (45/47)    IGHJ4*02     2    ------------------------------------------...........A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_279689

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           349     2e-98
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGGAGAAG	ACGATTTTTGGAGTGG	N/A	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGGAGAAGACGATTTTTGGAGTGGTTACTTCTACCTCCACGGGATGCACGTC	ARVGEDDFWSGYFYLHGMHV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  A  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11488  1    GGTCCCTGAGACTCTCCTGTTCAGCGTCTGGATTCACCTTCGCTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-33*01  47   ....................G....................AG...C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  T  T  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11488  91   AGTGGGTGGCAGTTATTTGGTATGATGGAACTACTAAGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCC  180
V  94.8% (236/249)  IGHV3-33*01  137  ................A.............G..A...A...................................................A  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      Q  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  E  D  D  F  W  
                    Query_11488  181  AGAACACGTTGTATCTGCAAATGAACAGCCTGCGAGCCGAAGACACGGCTGTCTATTACTGTGCGAGAGTCGGAGAAGACGATTTTTGGA  270
V  94.8% (236/249)  IGHV3-33*01  227  ........C.......................A.......G...........G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (16/16)   IGHD3-3*01   6    ------------------------------------------------------------------------------............  17

                                      R3-IMGT------------------------>                                 
                                      S  G  Y  F  Y  L  H  G  M  H  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11488  271  GTGGTTACTTCTACCTCCACGGGATGCACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  100.0% (16/16)   IGHD3-3*01   18   ....-------------------------------------------------------------  21
J  90.2% (55/61)    IGHJ6*02     2    ----.....A....TA.T....T...G......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_279688

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     3e-93
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACTTATTCC	AGTGGTTATT	CACCCCTTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACTTATTCCAGTGGTTATTCACCCCTTTACTAC	AKDNTYSSGYSPLYY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11489  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  T  
                    Query_11489  91   AGTGGGTCTCAGCGATTACTGGGAGTGGTAGTAGTACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTACACCA  180
V  92.4% (231/250)  IGHV3-23*01  137  .............T....G...T......G....C.........G......................................A.TT...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  L  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_11489  181  AGAACACGCTGTATCTGCTAATGAACAGCCTTACAGCCGAGGACACGGCCGTCTATTACTGTGCGAAGGATAACACTTATTCCAGTGGTT  270
V  92.4% (231/250)  IGHV3-23*01  227  ..................A............G.G..................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  Y  Y  W  G  Q  G  T  L  V  T  D  S  S  
                    Query_11489  271  ATTCACCCCTTTACTACTGGGGCCAGGGAACCCTGGTCACCGACTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  97.4% (38/39)    IGHJ4*02     10   ------------..............................T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_151068

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTTC	GATAGTAGTGGCTATTAC	CAATCCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTTCGATAGTAGTGGCTATTACCAATCCAACTACTACTTTGGCATGGACGTC	ARVFDSSGYYQSNYYFGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  F  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11490  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGCAATTATTTCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-21*01  47   ....................................C......T.GC...AG.....A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  S  G  S  R  F  I  F  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11490  91   AGTGGGTCGCATCCATTAGTAGTGGTAGTCGTTTCATCTTCTACGGAGACTCAGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  92.8% (231/249)  IGHV3-21*01  137  ........T..............A.....A...A...A.A.....C.................................A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  S  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  F  D  S  S  G  Y  
                    Query_11490  181  AGAACTCACTGTCTCTGCAAATGAGTAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGTTTTCGATAGTAGTGGCTATT  270
V  92.8% (231/249)  IGHV3-21*01  227  ............A...........AC...........................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD3-22*01  11   --------------------------------------------------------------------------...........T....  26

                                      R3-IMGT------------------------>                                 
                                      Y  Q  S  N  Y  Y  F  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11490  271  ACCAATCCAACTACTACTTTGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  94.4% (17/18)    IGHD3-22*01  27   ..---------------------------------------------------------------  28
J  94.6% (53/56)    IGHJ6*02     7    ---------.........AC..T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_151069

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_11491  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_11491  91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_11491  181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_11491  271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_248969

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           339     2e-95
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGCCCACCGATTAATCTTC	GATAGAAGTGGTTATTACT	TGCGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGCCCACCGATTAATCTTCGATAGAAGTGGTTATTACTTGCGCGAC	ASAHRLIFDRSGYYLRD	246	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_11492  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGCAAGGGCC  93
V  93.9% (232/247)  IGHV4-31*03  50   .....TCC...A......................................................................G.......  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  H  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  F  I  S  G  D  T  S  
                    Query_11492  94   TGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCGACTACAACCCGTCCCTCAAGAGTCGAGTTTTCATATCAGGAGACACGTCCA  183
V  93.9% (232/247)  IGHV4-31*03  140  ..............T.......................T.............................AC........T.........T.  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  S  A  H  R  L  I  F  D  
                    Query_11492  184  AGAACCAGTTCTCCCTCAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCATTTATTACTGTGCGAGCGCCCACCGATTAATCTTCGATA  273
V  93.9% (232/247)  IGHV4-31*03  230  ................G.A...............................G.G..............-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  94.7% (18/19)    IGHD3-22*01  11   --------------------------------------------------------------------------------------....  14

                                      GT-------------------->                                  
                                      R  S  G  Y  Y  L  R  D  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11492  274  GAAGTGGTTATTACTTGCGCGACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  330
D  94.7% (18/19)    IGHD3-22*01  15   .T.............------------------------------------------  29
J  97.2% (35/36)    IGHJ4*02     13   ---------------------..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_16080

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     2e-90
IGHD3-10*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCGGAGGTTCC	ACTATGG	CCACCTGACACCAC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCGGAGGTTCCACTATGGCCACCTGACACCACTTGAGTAC	ASRRFHYGHLTPLEY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	224	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  N  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_11493  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAACTGGGTCCGCCAGACCCCAGGGAGGGGGCTGGAG  90
V  92.6% (224/242)  IGHV4-34*01  49   .......................................................G....A........C.........A..........  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  V  N  H  S  G  N  S  N  S  N  P  S  L  K  S  R  V  T  I  L  V  D  T  S  K  N 
                    Query_11493  91   TGGCTTGGGGAAGTCAATCATAGTGGCAACAGCAACTCCAACCCGTCCCTCAAGAGTCGAGTCACCATATTAGTCGACACGTCCAAGAAC  180
V  92.6% (224/242)  IGHV4-34*01  139  ...A........A.............A.G..C.....A................................C...A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  S  R  R  F  H  Y  G  H  L  T 
                    Query_11493  181  CAGTTCTCCCTGAAACTGACTTCTGTGACCGCCGCGGACACGGCTCTTTATTATTGTGCGAGTCGGAGGTTCCACTATGGCCACCTGACA  270
V  92.6% (224/242)  IGHV4-34*01  229  ..............G....GC........................G.G.....C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD3-10*01  6    -------------------------------------------------------------------------.......----------  12

                                      ----------->                                  
                                       P  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11493  271  CCACTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.6% (41/42)    IGHJ4*02     7    ----....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_16082

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            311     4e-87
IGHD2-15*01                                                                                           33.4    1e-05
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GATATTGTAATGCTGGTAACTGCTAC	GAGGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATATTGTAATGCTGGTAACTGCTACGAGGGTGCTTTTGATATC	ARGYCNAGNCYEGAFDI	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	46	5	0	90.2
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	223	24	0	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  V  S  I  S  G  S  Y  W  Y  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_11494  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGTCTCCATCAGCGGTAGTTATTGGTATAGTTGGGTCCGCCAGACCCCAGGGAAGGGACTG  90
V  90.3% (223/247)  IGHV4-4*01   49   ...............................G..........A.....A.C....GG...............C.............G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  M  G  E  I  D  H  S  G  S  T  S  Y  N  P  S  V  K  S  R  L  T  I  S  E  D  K  S  K 
                    Query_11494  91   GAGTGGATGGGGGAAATCGATCACAGTGGGAGCACCAGCTACAATCCGTCCGTCAAGAGTCGACTCACCATATCAGAAGACAAGTCAAAG  180
V  90.3% (223/247)  IGHV4-4*01   139  ........T.........T....T.............A......C......C...........G............T.........C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  K  I  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  C  N  A  G  N  C 
                    Query_11494  181  AATAAAATCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGATATTGTAATGCTGGTAACTGC  270
V  90.3% (223/247)  IGHV4-4*01   229  ..CC.GT..........G....G................................G...........-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  88.5% (23/26)    IGHD2-15*01  3    -------------------------------------------------------------------.........G..G.....G....  25

                                      -------------------->                                  
                                       Y  E  G  A  F  D  I  W  G  Q  G  T  M  V  P  V  S  S  
                    Query_11494  271  TACGAGGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCCCCGTCTCTTCAG  325
D  88.5% (23/26)    IGHD2-15*01  26   ...----------------------------------------------------  28
J  97.9% (46/47)    IGHJ3*02     4    --------..................................A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_16085

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           288     5e-80
IGHD2-15*01                                                                                           21.8    0.042
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	GGATATTGTAATGG	GACCCTCTGCCACACTGGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGATATTGTAATGGGACCCTCTGCCACACTGGGGCTTTTGATTTC	ARDGYCNGTLCHTGAFDF	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  D  S  G  F  T  F  S  N  F  S  M  S  W  V  R  Q  S  P  G  K  G  L  
                    Query_11495  1    GGTCCCTGAGACTCTCCTGTACAGACTCTGGATTCACCTTTAGCAACTTTTCCATGAGTTGGGTCCGGCAGTCTCCAGGAAAGGGACTGG  90
V  86.8% (217/250)  IGHV3-23*01  47   ....................G...C....................G..A.G.......C........C...G.......G.....G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  A  S  G  R  R  P  Y  Y  A  D  S  A  K  G  R  F  S  V  L  R  D  N  S  
                    Query_11495  91   AGTGGGTTTCAAGTATCACTGCTAGCGGTCGTCGTCCATACTACGCAGACTCCGCGAAGGGCCGATTCTCCGTTCTCAGAGACAATTCCA  180
V  86.8% (217/250)  IGHV3-23*01  137  .......C...GC...T.G..G...T...G..A.CA..................T.........G...A..A.CTC..............  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  G  Y  C  N  G  T  
                    Query_11495  181  AGAACACTCTTTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTCTATTACTGTGCGAGAGACGGATATTGTAATGGGACCC  270
V  86.8% (217/250)  IGHV3-23*01  227  .......G..G.........................C...............A.............A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD2-15*01  2    -----------------------------------------------------------------------..........G...-----  15

                                      IMGT--------------------->                                  
                                      L  C  H  T  G  A  F  D  F  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_11495  271  TCTGCCACACTGGGGCTTTTGATTTCTGGGGCCAAGGGACAGTGGTCACCGTCTCCTCAG  330
J  93.5% (43/46)    IGHJ3*01     5    --------------.........G.................A.............T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_16084

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD2-15*01                                                                                           12.2    31   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CCTAAGGATTG	GGTGGT	TCCTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACCTAAGGATTGGGTGGTTCCTTACTACTTTGACCAC	ARPKDWVVPYYFDH	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  N  T  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11496  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAATACTTACTACTGGACCTGGATCCGACAGCCCCCAGGGAAGGGACTGGAG  90
V  91.8% (223/243)  IGHV4-59*01  49   ..................A.....................G..G...........G.........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  A  S  K  N 
                    Query_11496  91   TGGATTGGCTATGTCTATTCCAGTGGGAGCACTAACTACAACCCCTCCCTCAAGAGCCGAGTCACCATATCACTGGACGCGTCCAAGAAC  180
V  91.8% (223/243)  IGHV4-59*01  139  ........G...A......A............C.......................T...............G.A...A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  F  C  A  R  P  K  D  W  V  V  P  Y  Y 
                    Query_11496  181  CAGTTCTCCCTGAAACTGACCTCTGTGACCGCTGCCGACACGGCCCTCTATTTCTGTGCGCGACCTAAGGATTGGGTGGTTCCTTACTAC  270
V  91.8% (223/243)  IGHV4-59*01  229  ..............G....G...............G.........G.G....A.......A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-15*01  14   --------------------------------------------------------------------------......----------  19
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11496  271  TTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    ......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_16087

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           322     2e-90
IGHD3-3*01                                                                                            25.7    0.003
IGHJ5*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCCA	ATTACGACTTTTGGAATGG	CACGGC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCAATTACGACTTTTGGAATGGCACGGCACTGGTTCGACCCC	ARGPITTFGMARHWFDP	236	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	19	22	4	4	0	0	100
CDR1-IMGT	23	46	24	23	1	0	95.8
FR2-IMGT	47	97	51	49	2	0	96.1
CDR2-IMGT	98	121	24	21	3	0	87.5
FR3-IMGT	122	235	114	111	3	0	97.4
CDR3-IMGT (germline)	236	242	7	7	0	0	100
Total	N/A	N/A	224	215	9	0	96


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  D  D
                    Query_11497  19   GTCTGGATTCACCTTCAGGAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCTGTCATATGGGATGA  108
V  96.0% (215/224)  IGHV3-33*01  72   ..................T........................................................A..T......T....  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  D  N  K  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  G  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_11497  109  TGGAGATAATAAATACTATGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGGCAATTCCAAGAACACGCTGTATTTGCAAATGAA  198
V  96.0% (215/224)  IGHV3-33*01  162  ....AG..........................A.......................A......................C..........  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------------CDR3-IMGT-------------------->  
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  P  I  T  T  F  G  M  A  R  H  W  F  D  P  W
                    Query_11497  199  CAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGCCCAATTACGACTTTTGGAATGGCACGGCACTGGTTCGACCCCTG  288
V  96.0% (215/224)  IGHV3-33*01  252  ............................................----------------------------------------------  295
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  89.5% (17/19)    IGHD3-3*01   3    -------------------------------------------------.......T.......G...----------------------  21
J  100.0% (48/48)   IGHJ5*02     4    --------------------------------------------------------------------------................  19

                                                                      
                                        G  Q  G  T  L  V  T  V  S  S  
                    Query_11497  289  GGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  320
J  100.0% (48/48)   IGHJ5*02     20   ................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_16086

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           403     1e-114
IGHD5-18*01                                                                                           18.0    0.64  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGCCCC	GGATACGGCCATGGT	CTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGCCCCGGATACGGCCATGGTCTTC	ARVAPDTAMVF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  A  S  G  V  T  F  N  S  Y
                    Query_11498  1    GCAGCTGGTGCAGTCTGGAGCCGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGGCTTCTGGAGTCACCTTCAACAGCTA  90
V  94.5% (274/290)  IGHV1-69*06  6    ..................G..T........................................A...........G........G......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  L  P  F  F  G  T  A  T  Y  A  Q
                    Query_11498  91   TGCCATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCCTCCCTTTCTTTGGTACAGCAACATACGCACA  180
V  94.5% (274/290)  IGHV1-69*06  96   ...T....G.................................................A.....A...............AC........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  G  T  A  Y  M  E  L  S  S  L  R  S  D  D  T  A
                    Query_11498  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGGGCACAGCGTACATGGAACTGAGCAGCCTGAGATCTGACGACACGGC  270
V  94.5% (274/290)  IGHV1-69*06  186  ...........................................A.......C........G....................G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        V  F  Y  C  A  R  V  A  P  D  T  A  M  V  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11498  271  CGTGTTTTACTGTGCGAGAGTTGCCCCGGATACGGCCATGGTCTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  94.5% (274/290)  IGHV1-69*06  276  .....A..............------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                              
D  86.7% (13/15)    IGHD5-18*01  3    ---------------------------......A..T.....--------------------------------------  17
J  100.0% (35/35)   IGHJ4*02     14   ---------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_16089

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            378     3e-107
IGHD6-6*01                                                                                            21.8    0.044 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGTCGA	ATACCAGCTCGTCC	ACGAGGAAAGTCGG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGTCGAATACCAGCTCGTCCACGAGGAAAGTCGGACTTTGACTAC	ARSRIPARPRGKSDFDY	264	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	77	27	25	2	0	92.6
FR2-IMGT	78	128	51	49	2	0	96.1
CDR2-IMGT	129	149	21	20	1	0	95.2
FR3-IMGT	150	263	114	108	6	0	94.7
CDR3-IMGT (germline)	264	268	5	5	0	0	100
Total	N/A	N/A	268	255	13	0	95.1


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  G  V  S  G  G  S  I  S  S  D  N  W  W  G  W  V  
                    Query_11499  1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCACCTGCGGTGTCTCTGGTGGCTCCATCAGCAGTGATAACTGGTGGGGTTGGGTCC  90
V  95.1% (255/268)  IGHV4-4*02   26   ................T.........................C.........................AG..........A.........  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  T  G  S  T  S  Y  N  P  S  L  K  S  R  V  
                    Query_11499  91   GCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAGATCTATCATACTGGGAGCACCAGCTACAACCCGTCCCTCAAGAGTCGAGTCA  180
V  95.1% (255/268)  IGHV4-4*02   116  .....................................A..........G...........A.............................  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  N  L  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  
                    Query_11499  181  CCATATCAGTCGACAAGTCCAAGAACCAGTTCTCCCTGAACCTGACGTCTGTGACCGCCGCGGACACGGCCATGTATTACTGTGCGAGGA  270
V  95.1% (255/268)  IGHV4-4*02   206  ..........A.............................G....GC........................G................--  293
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A     

                                      --------------CDR3-IMGT-------------------->                                  
                                      S  R  I  P  A  R  P  R  G  K  S  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11499  271  GTCGAATACCAGCTCGTCCACGAGGAAAGTCGGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  348
D  92.9% (13/14)    IGHD6-6*01   5    -----...G..........-----------------------------------------------------------  18
J  100.0% (45/45)   IGHJ4*02     4    ---------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_44063

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AATT	TATGGTTCGGGGAGTTA	CCCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAAATTTATGGTTCGGGGAGTTACCCGTTTGACTAC	AKEIYGSGSYPFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11500  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   .............................................G.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  D  I  S  G  S  G  G  S  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11500  91   AGTGGCTGTCAGATATTAGTGGGAGTGGCGGAAGTACATACTACGCAGAGTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCAA  180
V  94.0% (235/250)  IGHV3-23*01  137  .....G.C....C.........T.....T..T..C..............C......................................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  N  L  R  S  E  D  T  A  V  Y  Y  C  A  K  E  I  Y  G  S  G  S  
                    Query_11500  181  AGAACACGCTGTATCTGCAAATGAACAACCTGAGAAGCGAGGACACGGCCGTATATTATTGTGCGAAAGAAATTTATGGTTCGGGGAGTT  270
V  94.0% (235/250)  IGHV3-23*01  227  ...........................G.......GC.....................C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (17/17)   IGHD3-10*01  8    --------------------------------------------------------------------------................  23

                                      ------------->                                  
                                      Y  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11500  271  ACCCGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (17/17)   IGHD3-10*01  24   .-----------------------------------------------  24
J  100.0% (43/43)   IGHJ4*02     6    -----...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_272308

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           39.1    3e-07
IGHJ2*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTGCCCATGA	ATTACTATGATAGTAGTGGCTCTTAC	ATTGGGAGCGTTA	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTGCCCATGAATTACTATGATAGTAGTGGCTCTTACATTGGGAGCGTTAGGTACTTCGATTTC	ARDVPMNYYDSSGSYIGSVRYFDF	238	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_11501  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTTTTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   ........................................G.....AC........C............C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  A  K  N 
                    Query_11501  91   TGGATTGGCTATGTCTATTCCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGCCGAGTCACCTTATCAGTGGACACGGCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G...A......A....................................T.........A.......A......T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------------C
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  V  P  M  N  Y  Y  D  S 
                    Query_11501  181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATGTGCCCATGAATTACTATGATAGT  270
V  94.3% (231/245)  IGHV4-59*01  229  .............A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.3% (24/26)    IGHD3-22*01  3    ----------------------------------------------------------------------------..............  16

                                      DR3-IMGT------------------------------>                                  
                                       S  G  S  Y  I  G  S  V  R  Y  F  D  F  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11501  271  AGTGGCTCTTACATTGGGAGCGTTAGGTACTTCGATTTCTGGGGCCGTGGCACCCTGGTCACTGTCTCTTCAG  343
D  92.3% (24/26)    IGHD3-22*01  17   .....T.A....-------------------------------------------------------------  28
J  95.8% (46/48)    IGHJ2*01     6    -------------------------...........C...............................C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_272306

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           422     2e-120
IGHD1-20*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GATAC	CC	GGTATAACTGGA	TCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGATACCCGGTATAACTGGATCTTTTGACTAC	ARIPGITGSFDY	263	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	30	0	0	100
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	21	0	0	100
FR3-IMGT	149	262	114	113	1	0	99.1
CDR3-IMGT (germline)	263	272	10	10	0	0	100
Total	N/A	N/A	272	271	1	0	99.6


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R
                    Query_11502  1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAATGTGTGTGAGCTGGATCCG  90
V  99.6% (271/272)  IGHV2-70*01  30   ..........................................................................................  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  G  L  T
                    Query_11502  91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACTCATTGATTGGGATGATGATAAATACTACAGCACATCTCTGAAGACCGGGCTCAC  180
V  99.6% (271/272)  IGHV2-70*01  120  ..................................................................................A.......  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  I
                    Query_11502  181  CATCTCCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACGTATTACTGTGCACGGAT  270
V  99.6% (271/272)  IGHV2-70*01  210  ..........................................................................................  299
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  I

                                      ------CDR3-IMGT------------>                                  
                                        P  G  I  T  G  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11502  271  ACCCGGTATAACTGGATCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  332
V  99.6% (271/272)  IGHV2-70*01  300  ..------------------------------------------------------------  301
                                                                                                    
D  100.0% (12/12)   IGHD1-20*01  1    ----............----------------------------------------------  12
J  100.0% (43/43)   IGHJ4*02     6    -------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_272305

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           332     3e-93
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AATGCCC	TTCGGGG	G	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGAAATGCCCTTCGGGGGTGCTTTTGATATC	VKEMPFGGAFDI	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  L  I  F  N  S  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11503  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGACTCATCTTCAATAGCTATTCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  92.4% (231/250)  IGHV3-64*05  47   ................................T...C.....G.......G.......................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  V  I  S  S  N  G  D  R  T  Y  Y  A  D  S  V  K  G  R  F  T  M  S  R  D  N  S  
                    Query_11503  91   AATTTGTATCAGTTATTAGTAGTAATGGGGATAGGACATATTACGCAGACTCAGTGAAGGGTAGATTCACCATGTCCAGAGACAATTCCA  180
V  92.4% (231/250)  IGHV3-64*05  137  ...A...T....C.................G...C.....C....................C...........C................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  M  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  E  M  P  F  G  G  A  
                    Query_11503  181  AGAATATGCTGTATCTTCAAATGAACAGTCTGAGACCTGAGGACACGGCTGTCTATTATTGTGTGAAAGAAATGCCCTTCGGGGGTGCTT  270
V  92.4% (231/250)  IGHV3-64*05  227  ....C.C.......G.........G..........G................G.....C...........--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (7/7)     IGHD3-10*01  13   -----------------------------------------------------------------------------.......------  19
J  97.9% (46/47)    IGHJ3*02     4    -------------------------------------------------------------------------------------.....  8

                                      ------->                                  
                                      F  D  I  W  G  R  G  T  M  V  T  V  S  S  
                    Query_11503  271  TTGATATCTGGGGCCGAGGGACAATGGTCACCGTCTCTTCAG  312
J  97.9% (46/47)    IGHJ3*02     9    ...............A..........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_272304

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    8.2  
IGHJ5*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TTGTC	GGATACA	CCTCTCTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTGTCGGATACACCTCTCTCGACTGGTTCGACCCC	VVGYTSLDWFDP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  S  S  R  Y  Y  W  G  W  I  R  Q  P  P  G  E  G 
                    Query_11504  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGCCTCCATCAGCAGTAGTCGTTACTACTGGGGTTGGATCCGCCAGCCCCCAGGGGAGGGG  90
V  91.4% (223/244)  IGHV4-39*01  49   .............................T.G................A.............C.....................A.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  Y  Y  P  E  S  P  Y  Y  N  P  S  L  N  Y  R  V  T  M  S  V  D  T  P 
                    Query_11504  91   CTGGAGTGGCTTGGGAGTATCTATTATCCTGAGAGCCCCTACTACAACCCGTCCCTCAATTATCGAGTCACCATGTCCGTAGACACGCCC  180
V  91.4% (223/244)  IGHV4-39*01  139  .........A.................AG..G....A......................GAG............A............T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  D  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  G  Y  T  S  L  D  W 
                    Query_11504  181  AAGAACCAGTTCTCCCTGAGACTTGACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGTTGTCGGATACACCTCTCTCGACTGG  270
V  91.4% (223/244)  IGHV4-39*01  229  ...................AG..GAG...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (7/7)     IGHD5-18*01  3    ---------------------------------------------------------------------.......--------------  9
J  100.0% (48/48)   IGHJ5*02     4    -------------------------------------------------------------------------------------.....  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11504  271  TTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ5*02     9    ...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_272303

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         352     3e-99
IGHD3-16*01                                                                                           14.1    9.1  
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAAAAGTGGGCGCCCCCACGTGGATAGGG	TTGGGGG	GGGCGGGGGGCGACTAT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAAAAGTGGGCGCCCCCACGTGGATAGGGTTGGGGGGGGCGGGGGGCGACTATTTCGACCCC	ARGKVGAPTWIGLGGAGGDYFDP	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  A  F  S  T  Y  V  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11505    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTACCTATGTTCTACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-30-3*01  47   ...................................A.........G.....C.A.G..................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  D  G  G  N  K  Y  Y  A  D  S  V  R  G  R  F  S  I  S  R  D  N  S  
                    Query_11505    91   AGTGGGTGGCAGTTATATCATATGATGGAGGCAATAAATACTACGCAGACTCTGTGAGGGGCCGATTCTCCATCTCCAGAGACAATTCCA  180
V  95.2% (237/249)  IGHV3-30-3*01  137  .............................A......................C....A..........A.....................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><---------------------------
                                        K  N  T  L  Y  L  Q  M  T  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  G  K  V  G  A  P  T  
                    Query_11505    181  AGAACACGCTGTATCTGCAAATGACCAGCCTGAGACCTGAGGACACGGCTGTCTATTACTGTGCGAGAGGAAAAGTGGGCGCCCCCACGT  270
V  95.2% (237/249)  IGHV3-30-3*01  227  ........................A..........G................G................---------------------  295
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                        --CDR3-IMGT----------------------------->                                  
                                        W  I  G  L  G  G  A  G  G  D  Y  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11505    271  GGATAGGGTTGGGGGGGGCGGGGGGCGACTATTTCGACCCCTGGGGCCAGGGAACCCTGGTGACCGTCTCCTCAG  345
D  100.0% (7/7)     IGHD3-16*01    16   --------.......------------------------------------------------------------  22
J  97.7% (42/43)    IGHJ5*02       9    --------------------------------.............................C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_272302

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           383     1e-108
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	ARPSSASGWHFDN	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	71	3	0	95.9
CDR1-IMGT	79	102	24	18	6	0	75
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	18	6	0	75
FR3-IMGT	178	291	114	106	8	0	93
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	269	24	0	91.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  
                    Query_11506  5    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCA  94
V  91.8% (269/293)  IGHV5-51*03  2    .............................G.............G.........................G.........C.GC..T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  D  I  R  Y  
                    Query_11506  95   GTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGATATTAGATATA  184
V  91.8% (269/293)  IGHV5-51*03  92   .C..C.......G..................................................AT...GG...........CC.....C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_11506  185  GTCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  91.8% (269/293)  IGHV5-51*03  182  .C...............................C..A.AA........G.........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  G  M  Y  Y  C  A  R  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11506  275  CCGGCATGTATTACTGTGCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  364
V  91.8% (269/293)  IGHV5-51*03  272  ...C...................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ----------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    ---------------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_272301

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         349     2e-98
IGHD5-12*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGAGGAT	TGGCTACGA	GACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGACCCCCTTTGACCTC	ARAGRIGYETPFDL	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_11507    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTACTCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  95.1% (235/247)  IGHV4-38-2*02  49   ................................................T.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K 
                    Query_11507    91   GAGTGGATTGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAG  180
V  95.1% (235/247)  IGHV4-38-2*02  139  ......................A.........C.........A..............A........................C.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  Q  F  S  L  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  T 
                    Query_11507    181  AACCAGTTCTCGTTGAATCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGAGCGGGGAGGATTGGCTACGAGACC  270
V  95.1% (235/247)  IGHV4-38-2*02  229  ...........CC....G....G...........C...............G................-----------------------  295
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD5-12*01    11   -----------------------------------------------------------------------------.........----  19

                                        ----------->                                  
                                         P  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11507    271  CCCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.5% (42/44)    IGHJ4*02       5    --.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_272300

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     1e-109
IGHD1-1*01                                                                                            14.1    9.4   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAGGGGG	CAACTGG	GACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTAC	ARGGGNWDPFDY	292	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	70	1	0	98.6
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	46	5	0	90.2
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	105	9	0	92.1
CDR3-IMGT (germline)	292	296	5	5	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  
                    Query_11508  8    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCT  97
V  92.7% (268/289)  IGHV5-51*01  5    ..................................................................G............C......AG..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  V  V  Y  P  D  D  S  D  A  R  Y  S  
                    Query_11508  98   ACTGGATCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGGTCGTCTATCCTGATGACTCTGATGCCAGATACAGCC  187
V  92.7% (268/289)  IGHV5-51*01  95   ...................C..G.........A..........G.........A..A.........G..........A............  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  E  G  H  I  T  I  S  A  D  K  S  I  S  T  P  F  L  Q  W  N  S  L  K  A  S  D  T  
                    Query_11508  188  CGTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCAGCACCCCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACACCG  277
V  92.7% (268/289)  IGHV5-51*01  185  ........C.......GG................................G...A...........G.......................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-------------CDR3-IMGT------------>                                  
                                      A  I  Y  Y  R  A  R  G  G  G  N  W  D  P  F  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_11508  278  CCATCTATTACCGGGCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  361
V  92.7% (268/289)  IGHV5-51*01  275  ....G......T.T.....-----------------------------------------------------------------  293
                                      A  M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    ----------------------------.......-------------------------------------------------  11
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------...............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_135101

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGAA	GTGGATACA	ACCTTGGTCAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGAAGTGGATACAACCTTGGTCATAACTGGTTCGACCCC	ARDPTGSGYNLGHNWFDP	237	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	26	25	25	0	0	100
CDR1-IMGT	27	50	24	20	4	0	83.3
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	122	21	20	1	0	95.2
FR3-IMGT	123	236	114	106	8	0	93
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	243	227	16	0	93.4


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        L  S  L  T  C  T  V  S  G  V  S  I  S  H  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W
                    Query_11509  2    CCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATAAGTCATTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAATG  91
V  93.4% (227/243)  IGHV4-59*01  51   .............................G......C...AG............C................................G..  140
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W

                                      ---------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IM
                                        I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  T  S  V  D  T  T  K  N  Q
                    Query_11509  92   GATTGGATATATCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCACGTCAGTAGACACGACCAAGAACCA  181
V  93.4% (227/243)  IGHV4-59*01  141  ......G......T...................................................TA............T..........  230
                                        I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q

                                      GT----------------------------------------------------><----------------------CDR3-IMGT---
                                        F  S  L  S  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  L  G
                    Query_11509  182  GTTCTCCCTGAGCCTCAGTTCTGTGACCGTTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCCTACCGGAAGTGGATACAACCTTGG  271
V  93.4% (227/243)  IGHV4-59*01  231  ...........AG..G..C..........C.................................---------------------------  293
                                        F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                              
D  100.0% (9/9)     IGHD5-18*01  1    --------------------------------------------------------------------------.........-------  9

                                      ------------------>                                  
                                        H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11509  272  TCATAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTAACCGTCTCCTCAG  324
J  98.0% (48/49)    IGHJ5*02     3    ----...................................C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_179302

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	N/A	TCGACCCTGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCGACCCTGCTTGACAAA	ASTLLDK	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11510  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGCACCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (229/245)  IGHV3-23*01  47   ....................................C........G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  T  G  I  S  G  S  G  E  N  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_11510  91   AGTGGGTCACAGGTATCAGTGGTAGTGGTGAAAACACATACTACGCAGACTCCGTGAAGGGCCGTTTCACCGTCTCCAGAGACAATTCCA  180
V  93.5% (229/245)  IGHV3-23*01  137  ........T...C...T.............GT.G..............................G......A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  T  V  S  V  Q  M  D  S  L  S  A  E  D  T  A  V  Y  Y  C  A  S  T  L  L  D  K  W  G  
                    Query_11510  181  AGAACACGGTGTCTGTGCAAATGGACAGCCTGAGCGCCGAGGACACGGCCGTATATTACTGTGCGTCGACCCTGCTTGACAAATGGGGCC  270
V  93.5% (229/245)  IGHV3-23*01  227  ........C...A.C........A..........A..............................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  92.9% (39/42)    IGHJ4*02     7    ---------------------------------------------------------------------------.....T.C.......  21

                                                                 
                                      Q  G  T  L  V  T  V  S  P  
                    Query_11510  271  AGGGAACCCTGGTCACCGTCTCCCCAG  297
J  92.9% (39/42)    IGHJ4*02     22   .......................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_135103

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         352     3e-99
IGHD3-10*01                                                                                           16.1    2.5  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CATGGA	GGTCCGGGGAATTA	CCAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACATGGAGGTCCGGGGAATTACCAGTTTGACTAC	ARHGGPGNYQFDY	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	75	72	68	4	0	94.4
CDR1-IMGT	76	99	24	18	6	0	75
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	95	19	0	83.3
CDR3-IMGT (germline)	289	294	6	5	1	0	83.3
Total	N/A	N/A	291	258	33	0	88.7


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  D  T 
                    Query_11511    4    GTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAGGATCTCCTGTAAGGCTTCTGGATACAGTTTTGACACC  93
V  88.7% (258/291)  IGHV5-10-1*01  4    ..G.............................A........G.........................G............C...AC..G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         K  W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  H  Y  N 
                    Query_11511    94   AAGTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATAGATCCCAGTGACTCTTATACCCATTACAAC  183
V  88.7% (258/291)  IGHV5-10-1*01  94   T.C.......G................................................T.....T...............A.C....G.  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         S  S  F  Q  G  H  V  P  I  S  V  D  R  S  T  P  T  A  Y  M  Q  W  T  S  L  E  A  S  D  S 
                    Query_11511    184  TCGTCCTTCCAAGGACACGTCCCCATCTCGGTTGACAGGTCCACCCCCACTGCCTACATGCAGTGGACCAGCCTGGAGGCCTCGGACAGC  273
V  88.7% (258/291)  IGHV5-10-1*01  184  C.............C......A.......A.C.....A.....T.AG..........C.........G.......A............C.  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><--------------CDR3-IMGT-------------->                                  
                                         G  I  Y  F  C  A  R  H  G  G  P  G  N  Y  Q  F  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_11511    274  GGCATTTATTTCTGTGCGCGACATGGAGGTCCGGGGAATTACCAGTTTGACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  361
V  88.7% (258/291)  IGHV5-10-1*01  274  .C...G....A.......A..-------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                    
D  85.7% (12/14)    IGHD3-10*01    11   ---------------------------...T......G...-----------------------------------------------  24
J  97.7% (42/43)    IGHJ4*02       6    ---------------------------------------------.........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_135102

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           336     1e-94
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	N/A	GGGGAG	ATGGCCCCATTGCAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGGGAGATGGCCCCATTGCAATTGACTAC	AKGGDGPIAIDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11512  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACGTTCAGTACCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-30*18  47   ............................T........C.......G.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  M  S  F  D  G  S  S  K  H  Y  A  D  S  V  Q  G  R  F  S  I  S  R  D  N  S  
                    Query_11512  91   AGTGGGTGTCATTTATGTCATTTGATGGAAGTAGTAAACACTATGCAGACTCCGTGCAGGGCCGATTCTCCATCTCCAGAGACAATTCCA  180
V  93.2% (232/249)  IGHV3-30*18  137  ........G..G....A....A...........A....T.................A...........A.....................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  V  Y  L  Q  M  D  S  L  R  T  E  D  T  A  V  Y  Y  C  A  K  G  G  D  G  P  I  A  
                    Query_11512  181  AGAACACGGTGTATCTTCAAATGGACAGCCTGAGAACTGAGGACACGGCTGTGTATTATTGTGCGAAAGGGGGAGATGGCCCCATTGCAA  270
V  93.2% (232/249)  IGHV3-30*18  227  ........C.......G......A...........G......................C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD3-10*01  16   ---------------------------------------------------------------------......---------------  21

                                      ------->                                
                                      I  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11512  271  TTGACTACTGGGGCCAGGGAACTCTGGTCACCGTCTCCTC  310
J  97.5% (39/40)    IGHJ4*02     7    ......................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_135105

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD2-2*01                                                                                            14.1    9.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTCAATTTGGTTCCGCAAATGG	GTACCAG	N/A	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTCAATTTGGTTCCGCAAATGGGTACCAGTACGGCATGGACGTC	ARFQFGSANGYQYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_11513  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  98.3% (284/289)  IGHV5-51*03  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  S  L  E  W  I  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_11513  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAAGCCTGGAGTGGATTGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ..................................G.............G.........................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  R  A  S  D  S  A
                    Query_11513  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACAGCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ............................................G.............................A...........C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  F  Q  F  G  S  A  N  G  Y  Q  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_11513  271  CATGTATTACTGTGCGAGATTTCAATTTGGTTCCGCAAATGGGTACCAGTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  98.3% (284/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-2*01   15   ------------------------------------------.......-----------------------------------------  21
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------------.....T...................................  55

                                             
                                        S  S 
                    Query_11513  361  CTCCTCA  367
J  97.9% (47/48)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_292599

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           403     1e-114
IGHD4-17*01                                                                                           18.0    0.68  
IGHJ6*01                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAG	CTACGGTGA	GTCCGAGTACTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTC	ARDLATVSPSTFYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  T  S  Y 
                    Query_11514  2    CAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCTTCTGGTTACACCTTTACCAGTTAC  91
V  94.5% (274/290)  IGHV1-18*04  7    ....................T..........................................G......................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_11514  92   GGTATCACTTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  181
V  94.5% (274/290)  IGHV1-18*04  97   .......GC........A..............A................................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  S  D  D  T  A 
                    Query_11514  182  ATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.5% (274/290)  IGHV1-18*04  187  .A.C...A..G.................C....................C..........C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  T  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_11514  272  GTGTATTACTGTGCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTCTGGGGTCAAGGGACCACGGTCACC  361
V  94.5% (274/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------.........--------------------------------------------------------  12
J  98.1% (52/53)    IGHJ6*01     11   -----------------------------------------------........................G..................  53

                                                
                                       V  S  S  
                    Query_11514  362  GTCTCCTCAG  371
J  98.1% (52/53)    IGHJ6*01     54   ..........  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_135107

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           296     2e-82
IGHD3-10*01                                                                                           10.3    124  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAG	TGCTTTC	GGTTC	TGG	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGTGCTTTCGGTTCTGGACTATTACTTCGGCTTGGACGTC	TRVLSVLDYYFGLDV	249	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	134	30	22	8	0	73.3
FR3-IMGT	135	248	114	101	13	0	88.6
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	222	33	0	87.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  T  S  G  F  S  F  R  D  Y  V  M  S  W  V  R  Q  A  P  G  K  G  P  
                    Query_11515  1    GGTCCCTGAGACTCTCCTGTACGACTTCTGGGTTCAGCTTTCGTGATTATGTTATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGACCGG  90
V  87.1% (222/255)  IGHV3-49*04  47   ......................AG.......A....C....G.........C......C..........................G.T..  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  N  I  R  T  R  G  Y  G  A  A  T  D  Y  A  A  S  V  K  G  R  F  S  I  S  R  D  
                    Query_11515  91   AGTGGGTAGGAAACATTAGGACAAGAGGTTATGGTGCGGCCACAGACTACGCCGCGTCTGTGAAAGGCAGATTCTCCATCTCAAGAGATG  180
V  87.1% (222/255)  IGHV3-49*04  137  ..........TTT......A.GC.A..C........G.A.A.....A...........................A...............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------------CDR3
                                      D  S  E  G  M  A  Y  L  E  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  V  L  S  V  L  
                    Query_11515  181  ATTCCGAAGGTATGGCCTACTTGGAAATGAACAGCCTGAAGACCGAGGACACAGCCGTTTACTATTGTACTAGAGTGCTTTCGGTTCTGG  270
V  87.1% (222/255)  IGHV3-49*04  227  .....A..A.C..C.....TC..C................A.................G..T..C..........---------------  301
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (5/5)     IGHD3-10*01  11   ----------------------------------------------------------------------------------.....---  15

                                      -IMGT----------------->                                 
                                      D  Y  Y  F  G  L  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_11515  271  ACTATTACTTCGGCTTGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  326
J  91.1% (51/56)    IGHJ6*02     7    ....C....A...TA..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_179304

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11516  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (226/248)  IGHV3-21*01  47   ............................T............AG...C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  G  
                    Query_11516  91   AGTGGGTCTCATCCATCAGTAGTAGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  91.1% (226/248)  IGHV3-21*01  137  ................T........T...AGT......T.C..C..A......G..A..............................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_11516  181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  91.1% (226/248)  IGHV3-21*01  227  ....C..................AA...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11516  271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_135109

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           291     5e-81
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCCCCCTCCTGTG	GGTGACTAC	GTCAGCGGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCCCCCTCCTGTGGGTGACTACGTCAGCGGCCTTGACTAT	AKPPPVGDYVSGLDY	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	19	7	0	73.1
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	126	24	20	4	0	83.3
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	244	215	29	0	88.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  V  A  S  G  F  M  F  T  T  S  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_11517  2    CCCTGTCCCTCACCTGCGTGGCCTCTGGATTCATGTTCACCACCTCTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGT  91
V  88.1% (215/244)  IGHV3-30*18  50   .....AGA...T....T.CA.............CC....GT.G..A............................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  A  V  I  S  C  D  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_11517  92   GGGTGGCAGTCATCTCATGTGATGGAAGTAATACGTACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGGGACAATTCCAAGA  181
V  88.1% (215/244)  IGHV3-30*18  140  ..........T..A....A..............AA.....T...................................A.............  229
                                      W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------CDR3-IMGT----
                                      N  T  L  S  L  Q  M  S  R  L  K  P  E  D  S  G  V  Y  Y  C  A  K  P  P  P  V  G  D  Y  V  
                    Query_11517  182  ACACCCTGTCTCTGCAAATGAGCAGGCTGAAACCTGAGGACTCGGGTGTCTATTACTGTGCGAAGCCCCCTCCTGTGGGTGACTACGTCA  271
V  88.1% (215/244)  IGHV3-30*18  230  ....G....A...........A...C....G.G........A...C...G..............--------------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  100.0% (9/9)     IGHD4-17*01  8    -----------------------------------------------------------------------------.........----  16

                                      ------------->                                  
                                      S  G  L  D  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_11517  272  GCGGCCTTGACTATTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  319
J  95.2% (40/42)    IGHJ4*02     7    ------.......C................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_135108

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           300     8e-84
IGHD6-13*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	218	26	0	89.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  A  L  E  
                    Query_11518  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGCACTGGAGT  93
V  89.3% (218/244)  IGHV4-59*08  50   .....TCC...A....C.........................G......................................G........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  V  G  S  I  F  S  T  G  T  T  N  Y  D  P  S  L  K  S  G  V  T  I  S  V  D  T  S  K  N  
                    Query_11518  94   GGGTCGGGTCTATCTTTTCCACTGGGACCACCAACTACGACCCCTCTCTCAAGAGTGGAGTCACCATTTCAGTGGACACGTCCAAGAACC  183
V  89.3% (218/244)  IGHV4-59*08  140  ..A.T....A.....A..A..G.....G..........A.......C.........C..........A.....A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      P  F  S  L  R  V  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  H  R  A  A  A  G  P  
                    Query_11518  184  CGTTCTCCCTGAGAGTGACCTCTCTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATCCCCATAGAGCAGCAGCTGGCCCCT  273
V  89.3% (218/244)  IGHV4-59*08  230  A...........AGC...G....G......................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (12/12)   IGHD6-13*01  7    -------------------------------------------------------------------------............-----  18
J  93.2% (41/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  D  N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_11518  274  TTGACAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  315
J  93.2% (41/44)    IGHJ4*02     7    .....T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_292596

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD2-15*01                                                                                           14.1    9.8   
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAGCGTT	AGGACATTGT	GTTAGAAGCACTTGCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGCGTTAGGACATTGTGTTAGAAGCACTTGCGACTACGGTATGGACGTC	ATALGHCVRSTCDYGMDV	289	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	292	4	4	0	0	100
Total	N/A	N/A	291	283	8	0	97.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_11519  2    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  91
V  97.3% (283/291)  IGHV5-51*01  2    ....G........G............................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  H  P  G  D  S  D  T  R  Y  
                    Query_11519  92   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCCATCCTGGTGACTCTGATACCAGATACA  181
V  97.3% (283/291)  IGHV5-51*01  92   G.............................................................T...........................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_11519  182  GTCCGTCTTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACA  271
V  97.3% (283/291)  IGHV5-51*01  182  .C.....C.........................................C....................C...................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------------CDR3-IMGT--------------------->                   
                                      T  A  M  Y  Y  C  A  T  A  L  G  H  C  V  R  S  T  C  D  Y  G  M  D  V  W  G  Q  G  T  T  
                    Query_11519  272  CCGCCATGTATTACTGTGCGACAGCGTTAGGACATTGTGTTAGAAGCACTTGCGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGG  361
V  97.3% (283/291)  IGHV5-51*01  272  .....................---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  90.0% (9/10)     IGHD2-15*01  1    ----------------------------....T.....----------------------------------------------------  10
J  100.0% (50/50)   IGHJ6*02     13   ------------------------------------------------------....................................  48

                                                    
                                      V  T  V  S  S 
                    Query_11519  362  TCACCGTCTCCTCA  375
J  100.0% (50/50)   IGHJ6*02     49   ..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_179308

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         389     2e-110
IGHD4-4*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTCGAGTGGAATCGAGTGAC	ACTACAGT	CCTTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCGAGTGGAATCGAGTGACACTACAGTCCTTCCTGACTCG	ATRVESSDTTVLPDS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	268	19	0	93.4


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  T  F  T  D  S
                    Query_11520    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACACCTTTACTGATTC  90
V  93.4% (268/287)  IGHV5-10-1*01  6    .............................................................................G......CAGC.A  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  N  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  K  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_11520    91   CTGGATCAACTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGAAAAATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  93.4% (268/287)  IGHV5-10-1*01  96   ........G.............A............................G.GG...................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  M  S  I  D  T  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11520    181  GTCCTTCCAAGGCCACGTCACCATGTCTATTGACACGTCCATCAGCACTGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (268/287)  IGHV5-10-1*01  186  ........................C..AGC.....A.................A....................................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          I  Y  F  C  A  T  R  V  E  S  S  D  T  T  V  L  P  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11520    271  CATATATTTCTGTGCGACTCGAGTGGAATCGAGTGACACTACAGTCCTTCCTGACTCGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  93.4% (268/287)  IGHV5-10-1*01  276  ...G....A........-------------------------------------------------------------------------  292
                                          M  Y  Y  C  A                                                                           
D  100.0% (8/8)     IGHD4-4*01     3    -------------------------------------........---------------------------------------------  10
J  94.9% (37/39)    IGHJ4*02       8    ---------------------------------------------------.....AC................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_292590

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	N/A	TCGACCCTGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCGACCCTGCTTGACAAA	ASTLLDK	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11521  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGCACCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (229/245)  IGHV3-23*01  47   ....................................C........G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  T  G  I  S  G  S  G  E  N  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_11521  91   AGTGGGTCACAGGTATCAGTGGTAGTGGTGAAAACACATACTACGCAGACTCCGTGAAGGGCCGTTTCACCGTCTCCAGAGACAATTCCA  180
V  93.5% (229/245)  IGHV3-23*01  137  ........T...C...T.............GT.G..............................G......A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  T  V  S  V  Q  M  D  S  L  S  A  E  D  T  A  V  Y  Y  C  A  S  T  L  L  D  K  W  G  
                    Query_11521  181  AGAACACGGTGTCTGTGCAAATGGACAGCCTGAGCGCCGAGGACACGGCCGTATATTACTGTGCGTCGACCCTGCTTGACAAATGGGGCC  270
V  93.5% (229/245)  IGHV3-23*01  227  ........C...A.C........A..........A..............................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  92.9% (39/42)    IGHJ4*02     7    ---------------------------------------------------------------------------.....T.C.......  21

                                                                 
                                      Q  G  T  L  V  T  V  S  P  
                    Query_11521  271  AGGGAACCCTGGTCACCGTCTCCCCAG  297
J  92.9% (39/42)    IGHJ4*02     22   .......................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_292591

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           439     2e-125
IGHD3-16*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTTGAGG	GATTAC	CAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTAC	ARSLRDYQPFYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	285	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_11522  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  98.6% (285/289)  IGHV5-51*03  6    .............................................................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_11522  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.6% (285/289)  IGHV5-51*03  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11522  181  GTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACTGC  270
V  98.6% (285/289)  IGHV5-51*03  186  ......................A................................................................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  S  L  R  D  Y  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  P  S  
                    Query_11522  271  CATGTATTACTGTGCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCCCCTCAG  359
V  98.6% (285/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  8    ----------------------------......-------------------------------------------------------  13
J  95.7% (45/47)    IGHJ4*02     2    ------------------------------------------....................A...................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_292592

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     7e-98
IGHD3-10*01                                                                                           18.0    0.58 
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTCTCTTGGCCATTTT	TATGGTTCG	AGTA	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTCTCTTGGCCATTTTTATGGTTCGAGTACTTTTGATATG	ARGSLGHFYGSSTFDM	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	233	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11523  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (233/244)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11523  91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (233/244)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  G  S  L  G  H  F  Y  G  S 
                    Query_11523  181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGAGGTTCTCTTGGCCATTTTTATGGTTCG  270
V  95.5% (233/244)  IGHV4-59*01  229  .............A......C.........G................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD3-10*01  8    ---------------------------------------------------------------------------------.........  16

                                      -------------->                                  
                                       S  T  F  D  M  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11523  271  AGTACTTTTGATATGTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  319
J  95.6% (43/45)    IGHJ3*02     6    ----..........C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_292593

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           353     1e-99
IGHD6-13*01                                                                                           21.8    0.042
IGHJ2*01                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-13*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAGGTCGGA	ATAGCAGCAGTTGG	AACCCC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAGGTCGGAATAGCAGCAGTTGGAACCCCCTGGTACTTCGATCTC	AKDKVGIAAVGTPWYFDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  F  A  F  S  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11524  1    GGTCCCTGAGACTCTCCTGTGAAGCCTTTGCATTCAGTTTCAGTAGCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTAG  90
V  95.2% (238/250)  IGHV3-30*18  47   .....................C.....C..G.....CC.............G....................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  T  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11524  91   AGTGGGTGGCAGTTATCTCATATGATGGAACTAAGAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (238/250)  IGHV3-30*18  137  ................A.............G...T.......................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  K  V  G  I  A  A  
                    Query_11524  181  AGAACACGGTGTATCTGCAAATGAACAGCCTGAGACCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATAAGGTCGGAATAGCAGCAG  270
V  95.2% (238/250)  IGHV3-30*18  227  ........C..........................G..................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD6-13*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      V  G  T  P  W  Y  F  D  L  W  G  R  G  T  L  V  S  V  S  S  
                    Query_11524  271  TTGGAACCCCCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCTCTGTCTCCTCAG  330
D  92.9% (13/14)    IGHD6-13*01  15   C...--------------------------------------------------------  18
J  98.0% (49/50)    IGHJ2*01     4    ----------.....................................A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_307313

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           271     7e-75
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	TCCGCACGTG	GGTACA	TCTCTGGTGTGCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCGCACGTGGGTACATCTCTGGTGTGCTCTTTGACTAC	SARGYISGVLFDY	247	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	18	8	0	69.2
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	132	30	24	6	0	80
FR3-IMGT	133	246	114	101	13	0	88.6
Total	N/A	N/A	245	209	36	0	85.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  S  T  S  G  F  N  F  G  D  Y  A  V  T  W  V  R  Q  V  P  G  K  G  L  E  
                    Query_11525  2    CCCTGTCCCTCACCTGCTCAACCTCTGGATTCAACTTTGGTGACTATGCTGTGACTTGGGTCCGCCAGGTTCCAGGGAAGGGACTGGAGT  91
V  85.3% (209/245)  IGHV3-49*04  50   .....AGA...T....TA..G.T..........C.........T......A...GC.............C............G.......  139
                                         L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><----------CDR2-IMGT---------><------------------------------------------------
                                      W  V  G  F  I  R  G  Q  G  Y  G  G  T  A  D  Y  A  A  S  V  R  G  R  F  L  I  S  R  D  D  
                    Query_11525  92   GGGTCGGATTCATTAGAGGCCAAGGGTATGGTGGGACAGCGGACTACGCCGCGTCTGTGAGAGGCAGATTCCTTATCTCAAGAGATGATT  181
V  85.3% (209/245)  IGHV3-49*04  140  ....A..T.........A..A...CT............A.A..A................A..........ACC................  229
                                      W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  D  

                                      ----FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT-
                                      S  T  S  I  A  Y  L  Q  M  S  S  L  K  T  D  D  T  G  L  Y  Y  C  S  A  R  G  Y  I  S  G  
                    Query_11525  182  CCACAAGTATCGCCTATCTGCAGATGAGCAGCCTGAAAACCGACGACACAGGCCTGTATTATTGTTCCGCACGTGGGTACATCTCTGGTG  271
V  85.3% (209/245)  IGHV3-49*04  230  ...A...C..............A....A...............G.......C.G.......C...-------------------------  294
                                      S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                          
D  100.0% (6/6)     IGHD1-1*01   1    ---------------------------------------------------------------------------......---------  6

                                      ------------->                                  
                                      V  L  F  D  Y  W  G  Q  G  A  L  V  S  V  S  S  
                    Query_11525  272  TGCTCTTTGACTACTGGGGCCAGGGAGCCCTGGTCAGTGTCTCCTCAG  319
J  93.2% (41/44)    IGHJ4*02     5    ----......................A.........CC..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_194131

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           406     1e-115
IGHD1-26*01                                                                                           12.2    37    
IGHJ3*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ATAGCGGAAACTACT	TATGTTAGAGACTC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGATAGCGGAAACTACTTATGTTAGAGACTCTGATGCTTTTGATATC	ARDRIAETTYVRDSDAFDI	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  N  N  Y 
                    Query_11526  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTCAATAACTAT  91
V  94.8% (275/290)  IGHV1-18*01  7    .................................................................T..............T.CC.G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  I  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_11526  92   GGTTTCATCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAG  181
V  94.8% (275/290)  IGHV1-18*01  97   ...A...G..................................................................................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  K  G  R  F  T  M  T  T  D  T  S  T  S  T  A  S  V  E  L  R  S  L  R  S  D  D  T  A 
                    Query_11526  182  AAATTCAAGGGCAGATTCACCATGACCACGGACACATCCACGAGCACAGCCTCCGTGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (275/290)  IGHV1-18*01  187  ..GC..C........G.............A......................A.A...................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  A  R  D  R  I  A  E  T  T  Y  V  R  D  S  D  A  F  D  I  W  G  Q  G  T  M  V 
                    Query_11526  272  GTGTATTACTGCGCGAGAGATCGGATAGCGGAAACTACTTATGTTAGAGACTCTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTC  361
V  94.8% (275/290)  IGHV1-18*01  277  ...........T........----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  80.0% (12/15)    IGHD1-26*01  4    ------------------------....T..G.G.....---------------------------------------------------  18
J  100.0% (50/50)   IGHJ3*02     1    -----------------------------------------------------.....................................  37

                                                   
                                       T  V  S  S  
                    Query_11526  362  ACCGTCTCTTCAG  374
J  100.0% (50/50)   IGHJ3*02     38   .............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_163966

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           300     9e-84
IGHD3-3*01                                                                                            37.2    1e-06
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	CACCCACGAACTTAC	TTACGATTTTTGGAATGGTTAT	CAGACTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACCCACGAACTTACTTACGATTTTTGGAATGGTTATCAGACTCTTGACTAT	TTHELTYDFWNGYQTLDY	249	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	102	12	0	89.5
CDR3-IMGT (germline)	249	250	2	2	0	0	100
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  T  S  V  I  Q  W  V  R  Q  A  S  G  K  G  L  
                    Query_11527  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGCTTCAATTTCAGTACCTCTGTTATACAGTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGC  90
V  88.4% (221/250)  IGHV3-73*01  47   .........A..................T..G....CC......GG.....C...G..C..............................G  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      Q  W  V  G  R  I  R  N  K  D  K  S  Y  A  T  A  Y  G  E  S  V  R  G  R  F  T  I  S  R  D  
                    Query_11527  91   AGTGGGTTGGCCGCATCAGAAACAAAGACAAAAGTTACGCGACAGCATATGGTGAGTCGGTGAGAGGCAGGTTCACCATCTCCAGAGATG  180
V  88.4% (221/250)  IGHV3-73*01  137  .............T..T....G.....CT..C...................C..C........A..........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  G  N  T  A  S  L  Q  M  N  S  L  K  P  E  D  T  A  V  Y  F  C  T  T  H  E  L  T  Y  
                    Query_11527  181  ATTCAGGGAACACGGCATCTCTGCAAATGAACAGCCTGAAGCCCGAGGACACGGCCGTATATTTTTGTACCACCCACGAACTTACTTACG  270
V  88.4% (221/250)  IGHV3-73*01  227  .....AA.........G.A.....................AA................G....AC.....--------------------  296
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  95.5% (21/22)    IGHD3-3*01   4    -------------------------------------------------------------------------------------.....  8

                                      -CDR3-IMGT--------------------->                                  
                                      D  F  W  N  G  Y  Q  T  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_11527  271  ATTTTTGGAATGGTTATCAGACTCTTGACTATTGGGGCCAGGGAATTCTGGTCACCGTCTCCTCAG  336
D  95.5% (21/22)    IGHD3-3*01   9    .........G.......-------------------------------------------------  25
J  92.9% (39/42)    IGHJ4*02     7    ------------------------.......C.............CC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_163967

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*07                                                                                           318     6e-89
IGHD1-26*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*07	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTACC	GGTGAAT	GGTATAGTG	AGAACCTGCCGGGG	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCGGTGAATGGTATAGTGAGAACCTGCCGGGGTTTAACTAC	TGEWYSENLPGFNY	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	24	6	0	80
FR3-IMGT	135	248	114	104	10	0	91.2
CDR3-IMGT (germline)	249	251	3	3	0	0	100
Total	N/A	N/A	251	227	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  R  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11528  1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGGTTCAGTTTCAGTAGAGCCTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (227/251)  IGHV3-15*07  47   .......T..............A........T....C........AC..........A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  K  D  A  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_11528  91   AGTGGGTCGGCCGGATCAAAAAGGATGCTGATGGTGGGACAACAGACTACGCTGCTCCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  90.4% (227/251)  IGHV3-15*07  137  .............T..T....GCA.AA............................A..................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  S  T  V  Y  L  Q  M  N  G  L  K  T  A  D  T  A  I  Y  F  C  T  G  E  W  Y  S  E  
                    Query_11528  181  ATTCAAAAAGCACGGTGTATCTGCAAATGAATGGCCTCAAAACCGCGGACACAGCCATATATTTCTGTACCGGTGAATGGTATAGTGAGA  270
V  90.4% (227/251)  IGHV3-15*07  227  .........A....C................CA....G.......A..........G.G....A.......-------------------  297
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (9/9)     IGHD1-26*01  1    ------------------------------------------------------------------------------.........---  9

                                      IMGT--------------->                                  
                                      N  L  P  G  F  N  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11528  271  ACCTGCCGGGGTTTAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.7% (42/43)    IGHJ4*02     6    -----------...G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_163960

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           438     5e-125
IGHD6-13*01                                                                                           12.2    35    
IGHJ3*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGGAAGCGGGCCGCACA	TGGTAC	GC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGGAAGCGGGCCGCACATGGTACGCCTTTTGATATC	AWKRAAHGTPFDI	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	283	3	0	99


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_11529  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCACCTA  90
V  99.0% (283/286)  IGHV5-51*01  6    ......................................................................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_11529  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  99.0% (283/286)  IGHV5-51*01  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11529  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  99.0% (283/286)  IGHV5-51*01  186  ............................................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        I  Y  Y  C  A  W  K  R  A  A  H  G  T  P  F  D  I  W  G  Q  G  T  M  V  S  V  S  S  
                    Query_11529  271  CATTTATTACTGTGCGTGGAAGCGGGCCGCACATGGTACGCCTTTTGATATCTGGGGCCAGGGGACTATGGTCAGCGTCTCTTCAG  356
V  99.0% (283/286)  IGHV5-51*01  276  ...G............----------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                       
D  100.0% (6/6)     IGHD6-13*01  16   ---------------------------------......-----------------------------------------------  21
J  93.3% (42/45)    IGHJ3*02     6    -----------------------------------------...................A.....A.......C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_163961

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            338     4e-95
IGHJ4*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	N/A	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	N/A	N/A	AGGCAATTGAACCCCAAAAT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAAGGCAATTGAACCCCAAAATCTTTGACTAC	VRRQLNPKIFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  K  N  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11530  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAAGAACTTTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (232/248)  IGHV3-7*03   47   ..........................................GT.G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  M  R  Q  D  G  R  E  I  Y  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_11530  91   AGTGGGTGGCCAACATGCGACAAGATGGGCGTGAGATATACTATGTGGACTCTGTGAGGGGCCGATTCACTATCTCCAGAGACAACGCCA  180
V  93.5% (232/248)  IGHV3-7*03   137  ................AAAG........AA......A....................A............C...................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  P  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  R  Q  L  N  P  K  I  
                    Query_11530  181  AGAACTCACTGTATCCGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGTGAGAAGGCAATTGAACCCCAAAATCT  270
V  93.5% (232/248)  IGHV3-7*03   227  ...............T....................................G..........C....----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (44/44)   IGHJ4*01     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11530  271  TTGACTACTGGGGCCAAGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (44/44)   IGHJ4*01     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_307315

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           248     8e-68
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCACCTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCACCTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	ARGLLIEDPTYVWGSFRRNHNCYTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	92	22	0	80.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	201	43	0	82.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  R  L  E 
                    Query_11531  1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGAGACTGGAG  90
V  82.4% (201/244)  IGHV4-59*01  49   ..................A....C.......G.......A...G..........AG....A.C........C.......A.G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_11531  91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  82.4% (201/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_11531  181  CAGTTGTCTCTCAACCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCACCTAT  270
V  82.4% (201/244)  IGHV4-59*01  229  .....C..C..G..G....G.TCT.....................GT.....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_11531  271  GTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  94.7% (36/38)    IGHJ3*01     13   --------------------------------------...................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_194130

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_11532  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.0% (222/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_11532  91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.0% (222/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  G  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_11532  181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGGCACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.0% (222/244)  IGHV4-59*01  229  ...T...............G.................A..............A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_11532  271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_307319

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            358     4e-101
IGHD2-2*01                                                                                            18.0    0.62  
IGHJ6*02                                                                                              108     9e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAGCGTTC	CCAGCTGCT	CTGGGGGCGGG	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGAGCGTTCCCAGCTGCTCTGGGGGCGGGATTACTACTACTACTACGTGATGGACGTC	ARVERSQLLWGRDYYYYYVMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11533  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTTAGTAACTACTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-7*03   47   .....................................C.......G...T........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11533  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (239/249)  IGHV3-7*03   137  ......................................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  K  S  L  Y  L  L  I  D  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  V  E  R  S  Q  L  L  
                    Query_11533  181  AGAAATCACTGTATCTCCTAATAGACAGCCTGAGAGTCGAGGACACGGCCGTGTATTACTGTGCGAGAGTGGAGCGTTCCCAGCTGCTCT  270
V  96.0% (239/249)  IGHV3-7*03   227  ....C...........G.A...GA............C................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD2-2*01   18   -------------------------------------------------------------------------------.........--  26

                                      -CDR3-IMGT--------------------------->                                 
                                      W  G  R  D  Y  Y  Y  Y  Y  V  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11533  271  GGGGGCGGGATTACTACTACTACTACGTGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
J  96.8% (60/62)    IGHJ6*02     1    ---------..................GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_307318

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           400     9e-114
IGHD3-22*01                                                                                           39.1    3e-07 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AG	TTACTATGATAGTGGTGGTTATT	TCGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTTACTATGATAGTGGTGGTTATTTCGGCTTTGACTAC	ARSYYDSGGYFGFDY	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	71	4	0	94.7
CDR1-IMGT	77	100	24	15	9	0	62.5
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	112	2	0	98.2
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	294	275	19	0	93.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_11534  2    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACT  91
V  93.5% (275/294)  IGHV1-69*01  1    ...G...................G.....................T....G..........................AGG......C.GC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  F  L  G  T  T  N  Q 
                    Query_11534  92   AACTATGGCATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTTTCTTGGGTACAACAAACCAA  181
V  93.5% (275/294)  IGHV1-69*01  91   .G.....CT....G.......................................................A....T......G.....T.C  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_11534  182  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGAC  271
V  93.5% (275/294)  IGHV1-69*01  181  ..........................................................................................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  R  S  Y  Y  D  S  G  G  Y  F  G  F  D  Y  W  G  Q  G  T  L  V  T  V 
                    Query_11534  272  ACGGCCGTGTATTACTGTGCGAGAAGTTACTATGATAGTGGTGGTTATTTCGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTC  361
V  93.5% (275/294)  IGHV1-69*01  271  ........................------------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                   
D  95.7% (22/23)    IGHD3-22*01  4    --------------------------.............A.........-----------------------------------------  26
J  100.0% (44/44)   IGHJ4*02     5    -----------------------------------------------------.....................................  41

                                             
                                       S  S  
                    Query_11534  362  TCCTCAG  368
J  100.0% (44/44)   IGHJ4*02     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_163968

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         321     7e-90
IGHD2-2*02                                                                                            21.8    0.043
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGGGGGG	TTGTAGTACTTCCAGTTGCCATA	N/A	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGGGGGGTTGTAGTACTTCCAGTTGCCATAACTTCTACGACTACGCTATGGACGTC	ARAGGGCSTSSCHNFYDYAMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  Y  A  L  H  W  V  R  Q  S  P  G  K  G  L  
                    Query_11535    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTACTATGCTCTTCACTGGGTCCGCCAGTCTCCAGGCAAGGGACTGG  90
V  91.2% (227/249)  IGHV3-30-3*01  47   ............................................AG.......A.G...............G.............G....  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  L  I  S  F  D  G  G  V  E  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_11535    91   AGTGGGTGGCACTCATTTCATTTGATGGAGGCGTTGAATACTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  91.2% (227/249)  IGHV3-30-3*01  137  ...........G.T..A....A.......A..AA.A.....................A...........................T....  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><---------------------------
                                        K  K  T  L  Y  L  Q  M  N  S  L  T  S  E  D  T  A  V  Y  Y  C  A  R  A  G  G  G  C  S  T  
                    Query_11535    181  AGAAGACACTGTATCTCCAAATGAACAGCCTGACATCTGAGGACACGGCTGTCTATTACTGTGCGAGAGCGGGGGGGGGTTGTAGTACTT  270
V  91.2% (227/249)  IGHV3-30-3*01  227  ....C..G........G................G.G................G................---------------------  295
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  82.6% (19/23)    IGHD2-2*02     7    -------------------------------------------------------------------------------........G.A  17

                                        -CDR3-IMGT--------------------------->                                 
                                        S  S  C  H  N  F  Y  D  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11535    271  CCAGTTGCCATAACTTCTACGACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  82.6% (19/23)    IGHD2-2*02     18   ....C...T...-----------------------------------------------------------  29
J  94.9% (56/59)    IGHJ6*02       4    ------------...A....T......G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_42652

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           420     7e-120
IGHD5-18*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTTCCCAACCGAAATGTCAAAAC	GTGGATAC	CTGCGCCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTCCCAACCGAAATGTCAAAACGTGGATACCTGCGCCCTCTAC	ARLSQPKCQNVDTCALY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  S  Y
                    Query_11536  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTTCCAGTTA  90
V  96.5% (279/289)  IGHV5-51*03  6    ..................................................................T...............A....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_11536  91   CTGGATCGTCTGGGTGCGCCAGATGCCGGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGGCC  180
V  96.5% (279/289)  IGHV5-51*03  96   ........G..................C...........................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  T  S  L  K  A  S  D  T  A
                    Query_11536  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGACCAGCCTGAAGGCCTCGGACACCGC  270
V  96.5% (279/289)  IGHV5-51*03  186  ............................................................G....G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  A  R  L  S  Q  P  K  C  Q  N  V  D  T  C  A  L  Y  W  G  Q  G  T  L  V  T  V
                    Query_11536  271  CATTTATTATTGTGCGAGACTTTCCCAACCGAAATGTCAAAACGTGGATACCTGCGCCCTCTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  96.5% (279/289)  IGHV5-51*03  276  ...G.....C.........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD5-18*01  1    -------------------------------------------........---------------------------------------  8
J  97.4% (37/38)    IGHJ4*02     11   ------------------------------------------------------------..............................  40

                                              
                                        S  A  
                    Query_11536  361  CTCCGCAG  368
J  97.4% (37/38)    IGHJ4*02     41   ....T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_42655

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           392     2e-111
IGHD2-15*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGC	ATATTGTAGTGATAGTAACTGCTAC	CCGAGGGAGCG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGCATATTGTAGTGATAGTAACTGCTACCCGAGGGAGCGCTACTTTGACCAC	ARLAYCSDSNCYPRERYFDH	291	350	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	68	6	0	91.9
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	272	21	0	92.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  A  G  E  S  L  R  I  S  C  K  V  S  G  Y  K  F  A  
                    Query_11537  4    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGGCGGGGGAGTCTCTGAGGATCTCCTGTAAGGTGTCTGGATACAAGTTTGCCA  93
V  92.8% (272/293)  IGHV5-51*03  2    ....G.....G...........................C...............A..............GT..........GC...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  M  Y  P  S  D  S  D  A  R  Y  
                    Query_11537  94   CCTATTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATGTATCCTAGTGACTCTGATGCCAGATACA  183
V  92.8% (272/293)  IGHV5-51*03  92   G...C...................................................A....C......G...........A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  G  L  E  A  S  D  
                    Query_11537  184  GCCCGTCCTTTGAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGTGGCCTGGAGGCCTCGGACA  273
V  92.8% (272/293)  IGHV5-51*03  182  ..........CC................C.........................................CA.....A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------------CDR3-IMGT------------------------>             
                                      T  A  M  Y  Y  C  A  R  L  A  Y  C  S  D  S  N  C  Y  P  R  E  R  Y  F  D  H  W  G  Q  G  
                    Query_11537  274  CCGCCATGTATTACTGTGCGAGACTGGCATATTGTAGTGATAGTAACTGCTACCCGAGGGAGCGCTACTTTGACCACTGGGGCCAGGGAA  363
V  92.8% (272/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  88.0% (22/25)    IGHD2-15*01  4    ----------------------------...........G.G...G.......-------------------------------------  28
J  95.7% (45/47)    IGHJ4*02     2    ----------------------------------------------------------------..........T...............  27

                                                           
                                      T  L  V  T  V  S  S  
                    Query_11537  364  CCCTGGTCACCGTCTCGTCAG  384
J  95.7% (45/47)    IGHJ4*02     28   ................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_42654

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           361     4e-102
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ2*01                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	TACTATAATCCTAGTGGTTATTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACTATAATCCTAGTGGTTATTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGYYGYWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	238	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_11538  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (238/245)  IGHV4-59*01  49   ............................................................A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  P  K  S  R  V  T  I  S  V  D  I  S  K  N 
                    Query_11538  91   TGGATTGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCCCAAGAGTCGAGTCACCATATCAGTAGATATCTCCAAGAAC  180
V  97.1% (238/245)  IGHV4-59*01  139  ........G........................................T...........................C.CG.........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  Y  Y 
                    Query_11538  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACTACTATAATCCTAGTGGTTATTAC  270
V  97.1% (238/245)  IGHV4-59*01  229  ...................G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (21/24)    IGHD3-22*01  5    ------------------------------------------------------------------......G..AG.............  28

                                      -------------------->                                  
                                       G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11538  271  GGGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  325
J  100.0% (52/52)   IGHJ2*01     2    ---....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_204829

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           330     1e-92
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GTCC	TTTGGAGTGGTTAT	CTT	ACAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGGTCCTTTGGAGTGGTTATCTTACAAGTGGTTCGACCCC	TTGPLEWLSYKWFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	128	30	27	3	0	90
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	237	224	13	0	94.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  I  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  I  G  R  I  
                    Query_11539  13   GTACAGCCTCTGGATTCATTTTCAGTAACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGATTGGCCGTATTA  102
V  94.5% (224/237)  IGHV3-15*01  65   ..G...............C..........................................................G............  154
                                         A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  

                                      -------CDR2-IMGT---------><----------------------------------------------------FR3-IMGT---
                                      R  S  K  T  G  G  G  T  T  E  Y  A  A  P  V  K  G  I  F  T  I  S  R  D  D  S  K  K  T  V  
                    Query_11539  103  GAAGCAAGACTGGTGGTGGGACAACAGAGTACGCTGCACCCGTGAAAGGCATATTCACCATTTCAAGAGATGATTCAAAAAAGACGGTGT  192
V  94.5% (224/237)  IGHV3-15*01  155  A......A....A...............C......................G.........C....................C...C...  244
                                      K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  

                                      -------------------------------------------------><-----------------CDR3-IMGT-------------
                                      Y  L  Q  M  N  S  L  K  T  E  D  T  A  I  Y  Y  C  T  T  G  P  L  E  W  L  S  Y  K  W  F  
                    Query_11539  193  ATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCATATATTACTGTACCACAGGTCCTTTGGAGTGGTTATCTTACAAGTGGTTCG  282
V  94.5% (224/237)  IGHV3-15*01  245  ......................................G.G................---------------------------------  301
                                      Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                                   
D  100.0% (14/14)   IGHD3-3*01   12   -------------------------------------------------------------..............---------------  25
J  98.0% (50/51)    IGHJ5*02     1    ------------------------------------------------------------------------------....C.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11539  283  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  98.0% (50/51)    IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_204828

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGTCGTATTCTTT	TGATAGTAGTGGT	CAGAGTCCCGCG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGTCGTATTCTTTTGATAGTAGTGGTCAGAGTCCCGCGTACTTTGACTAC	ARDLSYSFDSSGQSPAYFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11540  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  C  I  S  G  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11540  91   AGTGGGTCTCATGCATCAGTGGTGGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  ............C...T...A..A..................................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  S  Y  S  F  D  
                    Query_11540  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGTCGTATTCTTTTGATA  270
V  98.4% (246/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD3-22*01  10   -------------------------------------------------------------------------------------.....  14

                                      R3-IMGT------------------------>                                  
                                      S  S  G  Q  S  P  A  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11540  271  GTAGTGGTCAGAGTCCCGCGTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  336
D  100.0% (13/13)   IGHD3-22*01  15   ........----------------------------------------------------------  22
J  97.8% (45/46)    IGHJ4*02     3    --------------------........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_31279

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           327     9e-92
IGHD3-16*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	ACTTA	GGGGGAG	ACCAACAATGGGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACTTAGGGGGAGACCAACAATGGGGGGACTACTTTGGCAAC	ANLGGDQQWGDYFGN	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	225	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  E  L  E 
                    Query_11541  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATAGTTACTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAAGAACTGGAG  90
V  93.4% (225/241)  IGHV4-59*08  49   ...............................G........G.........C.............................G.G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  G  R  V  T  M  S  I  D  T  S  K  S 
                    Query_11541  91   TGGATTGGCTATGTCTATTACAGTGGGAGTACCAACTACAACCCCTCCCTTAAGGGTCGAGTCACCATGTCAATAGACACGTCCAAGAGC  180
V  93.4% (225/241)  IGHV4-59*08  139  ........G...A................C....................C...A.............A...G...............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  N  L  G  G  D  Q  Q  W  G  D 
                    Query_11541  181  CAGTTCTCACTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTATATTACTGTGCGAACTTAGGGGGAGACCAACAATGGGGGGAC  270
V  93.4% (225/241)  IGHV4-59*08  229  ........C..........G...........................G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD3-16*01  18   ------------------------------------------------------------------.......-----------------  24
J  93.8% (45/48)    IGHJ4*02     1    ----------------------------------------------------------------------------------------..  2

                                      ----------->                                  
                                       Y  F  G  N  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_11541  271  TACTTTGGCAACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  316
J  93.8% (45/48)    IGHJ4*02     3    .......A.T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_317599

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         313     2e-87
IGHD5-12*01                                                                                           21.8    0.042
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GAAGGTTAAGAC	GTGGATATAGCGGC	CAGCCTCCTGGAA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAAGGTTAAGACGTGGATATAGCGGCCAGCCTCCTGGAAGGTTCGACCCC	ARGRLRRGYSGQPPGRFDP	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  V  V  S  G  G  S  I  T  S  G  D  Y  S  W  S  W  I  R  L  P  P  G  K  G 
                    Query_11542    1    ACCCTGTCCCTCACCTGCGTTGTCTCTGGTGGCTCCATCACCAGCGGTGATTACTCCTGGAGCTGGATCCGGCTGCCTCCAGGGAAGGGC  90
V  90.0% (225/250)  IGHV4-30-2*01  49   ...................C....................G...T....G.......................A...A............  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  T  G  S  I  F  D  N  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S 
                    Query_11542    91   CTAGAGTGGACTGGGTCCATCTTTGATAATGGGCGCACCTACTACAATCCGTCCCTCAAGAGTCGAGTCACCATATCGCTGGACAAGTCC  180
V  90.0% (225/250)  IGHV4-30-2*01  139  ..G.......T.....A.....A.C...G....A.............C.............................AG.A....G....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                         R  N  H  F  S  L  E  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  L  R  R  G  Y 
                    Query_11542    181  AGGAACCACTTTTCCCTGGAACTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGCCAGAGGAAGGTTAAGACGTGGATAT  270
V  90.0% (225/250)  IGHV4-30-2*01  229  .A......G..C......A.G.....C................................C..........--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD5-12*01    1    ----------------------------------------------------------------------------------........  8

                                        3-IMGT----------------------->                                 
                                         S  G  Q  P  P  G  R  F  D  P  W  G  Q  G  T  L  V  I  V  S  S 
                    Query_11542    271  AGCGGCCAGCCTCCTGGAAGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCA  333
D  92.9% (13/14)    IGHD5-12*01    9    ..T...---------------------------------------------------------  14
J  97.7% (43/44)    IGHJ5*02       7    -------------------.................................C..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_204823

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           279     3e-77
IGHD3-16*01                                                                                           18.0    0.60 
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACAACG	TATGCTTAT	GTCAGTGCTTGGGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAACGTATGCTTATGTCAGTGCTTGGGGATGATGCTTTTGATGTC	ARRQRMLMSVLGDDAFDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	214	36	0	85.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  V  T  T  T  R  Y  S  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_11543  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCGTCACTACTACTAGATACTCCTGGGGTTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  85.6% (214/250)  IGHV4-39*01  49   ...............................G....A...GC.G..G...T....A......C..........................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Q  M  F  Y  G  G  S  T  Y  Q  N  P  S  L  N  S  R  V  T  V  S  V  D  P  S 
                    Query_11543  91   CTGGAATGGATTGGGCAGATGTTCTATGGTGGGAGCACGTACCAGAACCCGTCGCTGAATAGTCGAGTCACCGTGTCCGTTGACCCGTCC  180
V  85.6% (214/250)  IGHV4-39*01  139  .....G.........AGT..C.AT...A..........C...T.C........C..C..G............A.A.....A...A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  S  Q  F  F  L  N  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  R  Q  R  M  L  M  S 
                    Query_11543  181  AAGAGTCAGTTCTTCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCTGTATATTATTGTGCGAGACGACAACGTATGCTTATGTCA  270
V  85.6% (214/250)  IGHV4-39*01  229  ....AC.......C......G....G...................A.......G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  26   -----------------------------------------------------------------------------.........----  34

                                      -IMGT--------------------->                                  
                                       V  L  G  D  D  A  F  D  V  W  G  Q  G  T  G  V  T  V  S  S  
                    Query_11543  271  GTGCTTGGGGATGATGCTTTTGATGTCTGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  331
J  96.0% (48/50)    IGHJ3*01     1    -----------...............................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_204822

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD4-4*01                                                                                            19.9    0.15 
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-4*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	N/A	CTACAGTACCTAC	GCGCGAAGCTCCGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACTACAGTACCTACGCGCGAAGCTCCGGTTTTGATATC	ARDYSTYARSSGFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  A  Y  N  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11544  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTGCCTATAACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ....................................C.......AG.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  N  D  I  S  S  H  I  Y  Y  A  E  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11544  91   AGTGGGTCTCATACATTAATGATATTAGTAGTCACATATACTACGCAGAGTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ............C.....G.AG..G.......T................C...G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  F  C  A  R  D  Y  S  T  Y  A  R  
                    Query_11544  181  AGAACTCGCTGTATCTGCAAATGAACAGCCTGACAGCCGAGGACACGGCTGTTTATTTCTGTGCGAGGGACTACAGTACCTACGCGCGAA  270
V  93.2% (233/250)  IGHV3-21*01  227  .......A.........................G..................G....A.........A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD4-4*01   4    ----------------------------------------------------------------------........A....-------  16

                                      ---------------->                                  
                                      S  S  G  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11544  271  GCTCCGGTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  100.0% (44/44)   IGHJ3*02     7    -------............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_31277

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           413     2e-117
IGHD1-26*01                                                                                           10.3    133   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	289	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	280	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_11545  1    CAGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  90
V  94.6% (280/296)  IGHV1-18*01  1    .....T........G........................................A..................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  F  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  F 
                    Query_11545  91   ACCTTTGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTTT  180
V  94.6% (280/296)  IGHV1-18*01  91   .G..A..G.................................................T......G.G...........A.......C.A.  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_11545  181  GCACAGGGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  270
V  94.6% (280/296)  IGHV1-18*01  181  ......AA..................................................................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------CDR3-IMGT----------->                                  
                                       T  A  I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_11545  271  ACGGCCATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  355
V  94.6% (280/296)  IGHV1-18*01  271  ......G.G.................-----------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_31276

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	26	25	25	0	0	100
CDR1-IMGT	27	56	30	28	2	0	93.3
FR2-IMGT	57	107	51	47	4	0	92.2
CDR2-IMGT	108	128	21	21	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	246	240	6	0	97.6


Alignments

                                      <-------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT------
                                        L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  L
                    Query_11546  2    CCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGCCT  91
V  97.6% (240/246)  IGHV4-31*03  51   ................................C......C.............................C....................  140
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  L

                                      ---------------><-----CDR2-IMGT-----><----------------------------------------------------
                                        E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K
                    Query_11546  92   GGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAA  181
V  97.6% (240/246)  IGHV4-31*03  141  ...G.........T.C..........................................................................  230
                                        E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K

                                      FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT--------
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  D
                    Query_11546  182  GAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCGA  271
V  97.6% (240/246)  IGHV4-31*03  231  ..................................................................------------------------  296
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                           
D  100.0% (7/7)     IGHD3-3*01   15   -------------------------------------------------------------------.......----------------  21
J  100.0% (51/51)   IGHJ5*02     1    -----------------------------------------------------------------------------.............  13

                                      --->                                  
                                        P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11546  272  CCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (51/51)   IGHJ5*02     14   ......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_204827

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*02                                                                                           346     2e-97
IGHD3-22*01                                                                                           44.9    5e-09
IGHJ5*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*02	IGHD3-22*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CC	TATCACTATGATACTAGTGGTTATTACTA	N/A	CGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCTATCACTATGATACTAGTGGTTATTACTACGACTCC	ARAYHYDTSGYYYDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  I  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11547  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCATAAGTAACTATGGTATGCACTGGGTCCGCCAGGCCCCAGGGAAGGGACTGG  90
V  94.4% (235/249)  IGHV3-64*02  47   ......................................T.C....G.....C.....................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  R  N  G  D  R  T  Y  Y  G  D  S  V  E  G  R  F  T  I  S  R  D  N  S  
                    Query_11547  91   AATATGTTTCAGCTATTAGTCGTAATGGGGATCGCACATATTATGGAGACTCTGTGGAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-64*02  137  ....................A.........G.A............C..........A.................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  V  Y  L  Q  M  G  S  L  R  P  E  D  M  A  V  Y  Y  C  A  R  A  Y  H  Y  D  T  S  
                    Query_11547  181  AGAACACGGTGTATCTTCAGATGGGCAGCCTGAGACCTGAGGACATGGCTGTATATTACTGTGCGAGAGCCTATCACTATGATACTAGTG  270
V  94.4% (235/249)  IGHV3-64*02  227  ........C..........A...............G................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  93.1% (27/29)    IGHD3-22*01  2    -----------------------------------------------------------------------...T.........G.....  20

                                      ---------------->                                  
                                      G  Y  Y  Y  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11547  271  GTTATTACTACGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  93.1% (27/29)    IGHD3-22*01  21   ..........-----------------------------------------  30
J  97.6% (40/41)    IGHJ5*01     11   ----------...............A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_31270

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           308     4e-86
IGHD1-1*01                                                                                            12.2    32   
IGHJ5*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	TTTC	GGAACG	GTGGGTGCCCTAGTAGAT	TGGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAATTTCGGAACGGTGGGTGCCCTAGTAGATTGGATCGACTCC	ANFGTVGALVDWIDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	222	25	0	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  T  N  F  A  M  T  W  V  R  Q  P  P  G  K  G  L  
                    Query_11548  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTAACCTTTACCAACTTTGCCATGACCTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  89.9% (222/247)  IGHV3-23*01  47   ..................................C.......G..G..A........G.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  S  S  I  S  G  R  D  F  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11548  91   CGTGGGTCTCCTCTATTAGTGGCCGTGATTTTACGACATATTACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  89.9% (222/247)  IGHV3-23*01  137  A.........AG..........TA...G.GG..GC.....C...........C.................................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  S  L  R  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  N  F  G  T  V  G  A  L  
                    Query_11548  181  AGAACACCCTATCTCTGCGAATGAACAGTCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAATTTCGGAACGGTGGGTGCCCTAG  270
V  89.9% (222/247)  IGHV3-23*01  227  .......G..G.A.....A.........C.......................A..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD1-1*01   10   -----------------------------------------------------------------------......-------------  15

                                      ---------------->                                  
                                      V  D  W  I  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11548  271  TAGATTGGATCGACTCCTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  321
J  93.5% (43/46)    IGHJ5*01     6    -----...T................A..A......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_204825

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            319     2e-89
IGHD3-10*01                                                                                           10.3    121  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCAAATGCGACTA	GGGGA	T	TACAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACCAAATGCGACTAGGGGATTACAACTTCGGTATGGACGTC	AKDQMRLGDYNFGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  G  S  G  F  T  F  S  D  H  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11549  1    GGTCCCTGAGACTCTCCTGTACAGGCTCTGGATTCACTTTCAGTGATCATGGCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  90.8% (227/250)  IGHV3-9*01   47   ....................G...C............C..TGA....T...C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  N  S  G  S  I  D  Y  A  D  F  L  E  G  R  F  S  I  F  R  D  N  A  
                    Query_11549  91   AGTGGGTCTCAGGTATTAATTGGAATAGTGGTAGTATTGACTATGCGGACTTTCTGGAGGGCCGATTCTCCATCTTCAGAGACAACGCCA  180
V  90.8% (227/250)  IGHV3-9*01   137  ..................G...............C..A.G...........C.G..A...........A......C..............  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  E  M  N  N  L  R  P  D  D  T  A  L  Y  Y  C  A  K  D  Q  M  R  L  G  D  
                    Query_11549  181  AGAACACCCTCTATCTGGAAATGAACAATCTGAGACCTGACGACACGGCCTTGTATTACTGTGCAAAAGACCAAATGCGACTAGGGGATT  270
V  90.8% (227/250)  IGHV3-9*01   227  .....T....G......C.........G.......G....G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD3-10*01  16   -----------------------------------------------------------------------------------.....--  20
J  90.7% (49/54)    IGHJ6*02     9    -----------------------------------------------------------------------------------------.  9

                                      T------------------>                                 
                                      Y  N  F  G  M  D  V  W  G  R  G  T  A  V  T  V  S  S 
                    Query_11549  271  ACAACTTCGGTATGGACGTCTGGGGCCGAGGGACCGCGGTCACCGTCTCGTCA  323
J  90.7% (49/54)    IGHJ6*02     10   ..T...A....................A.......A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_31272

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            330     1e-92
IGHD3-16*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCAGCCTGATCGGGACAG	TGCTTAT	N/A	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCAGCCTGATCGGGACAGTGCTTATTAC	ASQPDRDSAYY	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  I  S  G  V  S  F  S  R  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11550  1    ACCCTGTCCCTCACCTGCGCTATATCTGGTGTCTCCTTCAGTAGAAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  93.1% (228/245)  IGHV4-4*02   49   .....................G.C.......G....A....C..T.G.......................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  D  S  G  S  T  N  Y  N  E  S  L  K  S  R  V  T  I  S  I  D  K  S  K 
                    Query_11550  91   GAGTGGATTGGGGAAATCTCTGATAGTGGGAGCACCAACTACAACGAGTCTCTCAAGAGTCGAGTCACCATATCAATAGACAAGTCCAAG  180
V  93.1% (228/245)  IGHV4-4*02   139  ...................A.C.......................CC...C........................G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  H  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  Q  P  D  R  D  S  A  Y 
                    Query_11550  181  AACCAATTCTCCCTGCATCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGCCAGCCTGATCGGGACAGTGCTTAT  270
V  93.1% (228/245)  IGHV4-4*02   229  .....G.........A.G...............................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-16*01  28   -----------------------------------------------------------------------------------.......  34

                                      -->                                  
                                       Y  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_11550  271  TACTGGGGCCAGGGAACCCTGGCCACCGTCTCCTCAG  307
J  97.3% (36/37)    IGHJ4*02     12   ......................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_70107

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            355     3e-100
IGHD3-16*01                                                                                           18.0    0.54  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	GGGT	CGTTTGGGG	CG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGGGGTCGTTTGGGGCGC	SRGRLGR	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11551  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (237/247)  IGHV3-7*03   47   .........................................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  N  Q  D  G  S  E  A  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11551  91   AGTGGGTGGCCATCATAAACCAAGATGGAAGTGAGGCATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  96.0% (237/247)  IGHV3-7*03   137  ............A......G...............AA..........................................A..........  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  S  R  G  R  L  G  R  W  G  
                    Query_11551  181  AGAACTCTCTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTGTATTACTGTTCGAGGGGTCGTTTGGGGCGCTGGGGCC  270
V  96.0% (237/247)  IGHV3-7*03   227  .......A.........C................................G...........G....-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD3-16*01  13   -----------------------------------------------------------------------.........----------  21
J  100.0% (35/35)   IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_11551  271  AGGGAACCCTGGTCACCGTCTCCTCAG  297
J  100.0% (35/35)   IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_164460

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTAG	CGCCATAG	TAGCAGCAGCTGGTAC	ACTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGCGCCATAGTAGCAGCAGCTGGTACACTATTTGACTAC	TSAIVAAAGTLFDY	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	241	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  T  F  S  G  S  V  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_11552  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGGTCACCTTCAGTGGCTCTGTTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  95.3% (241/253)  IGHV3-73*01  47   .........A......................T..................C......................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  G  K  A  N  N  Y  A  T  A  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_11552  91   AGTGGGTTGGCCGTATTAGAGGCAAAGCTAACAATTACGCGACGGCGTATGCTGCGCCGGTGAAGGGCAGGTTCACCATCTCCAGAGATG  180
V  95.3% (241/253)  IGHV3-73*01  137  ....................A............G.........A..A.........T.......A.........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  E  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  M  Y  Y  C  T  S  A  I  V  A  A  
                    Query_11552  181  ATTCAGAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAAGACACGGCCATGTATTACTGTACTAGCGCCATAGTAGCAGCAG  270
V  95.3% (241/253)  IGHV3-73*01  227  .....A........................................G.........G................-----------------  299
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (16/16)   IGHD6-13*01  6    ---------------------------------------------------------------------------------.........  14

                                      IMGT--------------->                                  
                                      A  G  T  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11552  271  CTGGTACACTATTTGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (16/16)   IGHD6-13*01  15   .......-----------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------....................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_65877

Length=432
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           341     7e-96
IGHD6-13*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              79.5    5e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCCATCCCGAGGGGGA	AGCAGCAGCTGGTAC	CGAAAGGGGC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCCATCCCGAGGGGGAAGCAGCAGCTGGTACCGAAAGGGGCACTTCTACGCAATGGATGTC	ASPSRGGSSSWYRKGHFYAMDV	310	375	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	120	45	20	4	21	44.4
FR2-IMGT	121	171	51	48	3	0	94.1
CDR2-IMGT	172	195	24	16	8	0	66.7
FR3-IMGT	196	309	114	107	7	0	93.9
CDR3-IMGT (germline)	310	314	5	5	0	0	100
Total	N/A	N/A	314	268	25	21	85.4


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><--------------
                                       Q  M  Q  L  V  Q  S  G  A  E  V  T  K  P  G  S  S  V  K  I  S  C  K  A  S  G  G  T  F  R 
                    Query_11553  1    CAGATGCAGCTGGTGCAGTCTGGGGCTGAGGTGACGAAGCCTGGGTCCTCGGTGAAGATCTCCTGCAAGGCTTCTGGAGGCACCTTCAGG  90
V  85.4% (268/314)  IGHV1-69*01  1    ...G..............................A......................G...............................C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      ---CDR1-IMGT-----------------><--------------------FR2-IMGT---------------------><-------C
                                       S  S  G  Y  T  F  G  T  Y  A  M  T  W  V  R  Q  A  P  G  Q  G  L  E  W  I  G  G  I  I  A 
                    Query_11553  91   TCTTCTGGATACACCTTCGGAACTTATGCCATGACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATAGGAGGGATCATCGCC  180
V  85.4% (268/314)  IGHV1-69*01  91   ---------------------.GC.....T..C.G.......................................G............C.T  159
                                                            S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P 

                                      DR2-IMGT------><----------------------------------------------------FR3-IMGT--------------
                                       I  A  G  V  I  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  A  N  T  A  Y  L  E  V 
                    Query_11553  181  ATCGCTGGTGTAATAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCGGCGAATACAGCCTACTTGGAGGTG  270
V  85.4% (268/314)  IGHV1-69*01  160  ...TT....AC.GC...................................................CA...GC.........A.....C..  249
                                       I  F  G  T  A  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L 

                                      --------------------------------------><----------------------------CDR3-IMGT-------------
                                       S  S  L  R  S  E  D  T  A  V  Y  Y  C  A  S  P  S  R  G  G  S  S  S  W  Y  R  K  G  H  F 
                    Query_11553  271  AGCAGCCTGAGATCTGAGGACACGGCCGTCTATTACTGTGCGAGCCCATCCCGAGGGGGAAGCAGCAGCTGGTACCGAAAGGGGCACTTC  360
V  85.4% (268/314)  IGHV1-69*01  250  .............................G..............----------------------------------------------  293
                                       S  S  L  R  S  E  D  T  A  V  Y  Y  C  A                                                 
D  100.0% (15/15)   IGHD6-13*01  7    ------------------------------------------------------------...............---------------  21
J  92.5% (49/53)    IGHJ6*02     10   -------------------------------------------------------------------------------------...A.  14

                                      -------------->                                 
                                       Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11553  361  TACGCAATGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  408
J  92.5% (49/53)    IGHJ6*02     15   ....GT.....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 42497568


Query= Query_110285

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           329     3e-92
IGHD1-1*01                                                                                            23.8    0.011
IGHJ3*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCACA	ACT	TACAACTGGAAC	TTAGATGGTGTCA	ATGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAACTTACAACTGGAACTTAGATGGTGTCAATGTTTTTGATGTC	ATTYNWNLDGVNVFDV	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	105	9	0	92.1
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	232	22	0	91.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11554  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAGGGCCTGGATGACCTGGGTCCGCCAGGCCCCAGGGAAGGGGCTGG  90
V  91.3% (232/254)  IGHV3-15*01  47   .......T.....................................AC..........G...............T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  I  G  R  I  K  T  T  T  E  G  G  T  T  D  Y  A  A  P  V  R  G  R  F  T  M  S  R  D  
                    Query_11554  91   AATGGATTGGCCGTATTAAAACCACCACCGAAGGTGGGACAACAGACTACGCTGCACCCGTGAGAGGCAGATTCACCATGTCAAGAGACG  180
V  91.3% (232/254)  IGHV3-15*01  137  .G...G...............G..AA..T..T...............................A...............C........T.  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  R  N  T  L  F  L  Q  I  N  S  L  K  T  E  D  T  A  L  Y  Y  C  A  T  T  Y  N  W  N  
                    Query_11554  181  ATTCAAGAAACACACTGTTTCTTCAAATAAACAGCCTGAAAACCGAGGACACAGCCCTGTATTACTGTGCCACAACTTACAACTGGAACT  270
V  91.3% (232/254)  IGHV3-15*01  227  ......A......G....A...G.....G...........................G...........A.....----------------  300
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (12/12)   IGHD1-1*01   3    -----------------------------------------------------------------------------............-  14

                                      R3-IMGT------------------>                                  
                                      L  D  G  V  N  V  F  D  V  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_11554  271  TAGATGGTGTCAATGTTTTTGATGTCTGGGGCCAAGGGACACAGGTCACCGTCTCTTCAG  330
J  93.8% (45/48)    IGHJ3*01     3    ------------...C.........................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_65875

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGATGGCCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTC	VRQSSDGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  S  Y
                    Query_11555  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCAGTTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ....................................C.......................................AG.........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  T  G  L  E  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  S  P
                    Query_11555  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGTGGATGGGGATCATCTTTCCGGATGACTCTGATACCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ................................A..........................A...T.G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11555  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTATCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  ............................................G.........C...........C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                           
                                        K  Y  Y  C  V  R  Q  S  S  D  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_11555  271  CAAGTATTATTGTGTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  355
V  95.2% (277/291)  IGHV5-51*01  276  ..T......C....C......----------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                   
J  100.0% (42/42)   IGHJ6*02     15   -------------------------------------------..........................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_65872

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           369     2e-104
IGHD2-8*02                                                                                            12.2    36    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACAGTCACCGGCTTC	ACTGGT	CGGCTGCCAA	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACAGTCACCGGCTTCACTGGTCGGCTGCCAAGACTCC	ARGQSPASLVGCQDS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	263	27	0	90.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  N  Y
                    Query_11556  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCGGGAGGCACCTTCAGCAACTA  90
V  90.7% (263/290)  IGHV1-69*01  6    ..................G..........A.......................................T................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  Q  A  P  G  P  G  L  E  W  M  G  G  F  M  P  I  F  G  A  A  D  Y  A  Q
                    Query_11556  91   TGGTATCAGCTGGGTGCGACAGGCCCCTGGACCAGGACTTGAGTGGATGGGAGGGTTCATGCCTATCTTTGGTGCAGCGGACTACGCCCA  180
V  90.7% (263/290)  IGHV1-69*01  96   ..C.............................A...G..................A....C............A....AA.......A..  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  A  T  I  T  A  D  E  S  T  G  T  S  Y  M  E  L  R  N  L  K  S  E  D  T  A
                    Query_11556  181  GAAGTTCCAAGACAGAGCCACCATTACCGCGGACGAATCCACGGGCACATCCTATATGGAACTGAGGAACCTGAAATCTGAAGACACGGC  270
V  90.7% (263/290)  IGHV1-69*01  186  .........G.G.....T...G.....................A.....G....C.....G.....C.G.....G......G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        G  Y  Y  C  A  R  G  Q  S  P  A  S  L  V  G  C  Q  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11556  271  CGGATATTACTGTGCGAGAGGACAGTCACCGGCTTCACTGGTCGGCTGCCAAGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  90.7% (263/290)  IGHV1-69*01  276  ..TG................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD2-8*02   11   ------------------------------------......------------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02     9    ----------------------------------------------------....A.................................  46

                                        
                                        
                    Query_11556  361  AG  362
J  97.5% (39/40)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_164465

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD1-26*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TTCCCGTCATC	AGTGGGAGC	CGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTCCCGTCATCAGTGGGAGCCGCGACTAC	AKLPVISGSRDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11557  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTCCTACTGGAGTTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  92.2% (225/244)  IGHV4-59*08  49   ...........................................G..A.........C.................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_11557  91   TGGATCGGATATATCTATTCTAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGCGTCACCATCTCGGTAGACACGTCCAAGAAG  180
V  92.2% (225/244)  IGHV4-59*08  139  .....T..G..........AC..............C.......................A........A..A.................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  K  L  P  V  I  S  G  S  R  D 
                    Query_11557  181  CAGTTCTCCCTGAAACTGAATTCTGTGACCGCCGCAGACTCGGCCGTCTATTACTGTGCGAAACTTCCCGTCATCAGTGGGAGCCGCGAC  270
V  92.2% (225/244)  IGHV4-59*08  229  ..............G....GC..................A.......G.............G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD1-26*01  6    ---------------------------------------------------------------------------.........------  14
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_11557  271  TACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   ..............................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_65870

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD1-26*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGTGAGA	GGGAGCTA	TTGTGGGGAGCAGTCAACGAGGATTG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGTGAGAGGGAGCTATTGTGGGGAGCAGTCAACGAGGATTGCTTTGACTCC	ARDSERELLWGAVNEDCFDS	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  I  N  H  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11558  1    GGTCCCTGAGACTCTCCTGTGCAGCATCTGGATTCACCTTTATCAACCATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   .........................C................G..G.T.........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  
                    Query_11558  91   AGTGGGTCTCGAGTATAAGTGGTAGTGGTGGTAGCACATACTACGCAGATTCCGTCAAGGGCCGGTTCACCATCTCCAGAGACATTTCCA  180
V  92.8% (232/250)  IGHV3-23*01  137  ..........AGC...T................................C.....G............................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  R  T  M  Y  L  Q  M  N  S  L  R  D  D  D  T  A  V  Y  Y  C  A  R  D  S  E  R  E  L  L  
                    Query_11558  181  AGAGGACGATGTATCTGCAAATGAACAGCCTGAGAGACGACGACACGGCCGTATATTACTGTGCGAGAGATAGTGAGAGGGAGCTATTGT  270
V  92.8% (232/250)  IGHV3-23*01  227  ...AC...C...........................C...G.........................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD1-26*01  9    ------------------------------------------------------------------------------........----  16

                                      R3-IMGT------------------------>                                
                                      W  G  A  V  N  E  D  C  F  D  S  W  G  Q  G  S  L  V  T  V  S  S
                    Query_11558  271  GGGGAGCAGTCAACGAGGATTGCTTTGACTCCTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTC  334
J  95.2% (40/42)    IGHJ4*02     5    ----------------------........A..............C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_110280

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           427     1e-121
IGHD3-3*01                                                                                            33.4    2e-05 
IGHJ5*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTACCCGACGAGGCGG	TTTTTGGAGTGGTTATT	CCCC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTACCCGACGAGGCGGTTTTTGGAGTGGTTATTCCCCCAACTGGTTCGACCCC	ARVTRRGGFWSGYSPNWFDP	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  T  F  T  S  Y 
                    Query_11559  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACTTCTGGTTACACCTTTACCAGTTAT  91
V  97.2% (281/289)  IGHV1-18*01  7    ...............................................................G......................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_11559  92   GGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGTTGGGATGGATCAGCGGTTACAATGGTAATACAAACTATGCACAG  181
V  97.2% (281/289)  IGHV1-18*01  97   .......G.....................................A...............C............C...............  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  V  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_11559  182  AGGGTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  97.2% (281/289)  IGHV1-18*01  187  .A.C......................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------CDR3-IMGT------------------------>                  
                                       V  Y  Y  C  A  R  V  T  R  R  G  G  F  W  S  G  Y  S  P  N  W  F  D  P  W  G  Q  G  T  L 
                    Query_11559  272  GTGTATTACTGTGCGAGAGTTACCCGACGAGGCGGTTTTTGGAGTGGTTATTCCCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTG  361
V  97.2% (281/289)  IGHV1-18*01  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (17/17)   IGHD3-3*01   10   -----------------------------------.................--------------------------------------  26
J  98.0% (49/50)    IGHJ5*02     2    --------------------------------------------------------..................................  35

                                                      
                                       V  T  V  S  S  
                    Query_11559  362  GTCACCGTCTCTTCAG  377
J  98.0% (49/50)    IGHJ5*02     36   ...........C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_164468

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           299     2e-83
IGHD3-16*01                                                                                           12.2    31   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGG	TGGGGG	GGCCCCGGTAT	TACGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGGTGGGGGGGCCCCGGTATTACGCTATGGACGTC	AREGVGGPRYYAMDV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	218	27	0	89


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  M  S  D  F  Y  W  S  W  L  R  Q  P  P  G  K  A  L  E 
                    Query_11560  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGCTTCCATGAGTGACTTCTACTGGAGTTGGCTCCGGCAGCCCCCAGGGAAGGCACTGGAG  90
V  89.0% (218/245)  IGHV4-59*01  49   ..................A............GC.....C...AGT.A.........C...A.....................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  T  G  S  T  N  H  N  P  S  L  R  N  R  V  T  I  S  V  D  R  S  K  N 
                    Query_11560  91   TGGATTGAGTACATCTATTACACTGGGAGTACCAACCACAATCCCTCCCTCAGGAATCGAGTCACCATTTCAGTAGACAGGTCCAAGAAC  180
V  89.0% (218/245)  IGHV4-59*01  139  .......G...T..........G......C......T....C..........A..G............A..........C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  E  G  V  G  G  P  R  Y  Y 
                    Query_11560  181  CAGTTCTCCCTGAAGTTGACTTCTGTGACCGCTGCGGACACGGCCATATATTATTGTGCGAGAGAGGGGGTGGGGGGGCCCCGGTATTAC  270
V  89.0% (218/245)  IGHV4-59*01  229  ...............C...GC........................G.G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------......--------------  22
J  97.9% (47/48)    IGHJ6*02     15   ---------------------------------------------------------------------------------------...  17

                                      ----------->                                 
                                       A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11560  271  GCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  315
J  97.9% (47/48)    IGHJ6*02     18   .G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_164469

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	221	24	6	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_11561  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.0% (221/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_11561  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.0% (221/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_11561  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCGGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.0% (221/251)  IGHV4-34*01  223  ....................GC............C...............T........C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_11561  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_56846

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           360     1e-101
IGHD6-13*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTT	TATAACAGCAGTTGG	GTGCTCGA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTTATAACAGCAGTTGGGTGCTCGATGACTTC	ARDFYNSSWVLDDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  I  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11562  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAATCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-21*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  T  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11562  91   AGTGGGTCTCATCCATTAGTAGTAGTACTAGTTACATATATTATGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-21*01  137  ...........................G............C..C..............................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  R  S  L  Y  L  H  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  Y  N  S  S  W  
                    Query_11562  181  AGAGATCACTGTATCTGCACATGAACAACCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGATTTTTATAACAGCAGTTGGG  270
V  96.0% (240/250)  IGHV3-21*01  227  ...AC..............A.......G........................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD6-13*01  4    --------------------------------------------------------------------------....G......C...-  18

                                      ------------->                                
                                      V  L  D  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11562  271  TGCTCGATGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  316
J  97.4% (38/39)    IGHJ4*02     8    -------.....A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_65878

Length=423
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           358     5e-101
IGHD2-2*01                                                                                            18.0    0.72  
IGHJ6*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGAGCCGCCCCCCCTGGG	GGATATTATGGTTGTCCCAGACGCTAT	TGATGTAC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGAGCCGCCCCCCCTGGGGGATATTATGGTTGTCCCAGACGCTATTGATGTACACTACTACAAAGGTGTGGACGTC	ARGEPPPLGDIMVVPDAIDVHYYKGVDV	284	367	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	64	5	0	92.8
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	95	19	0	83.3
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	259	30	0	89.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  V  V  R  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_11563  2    CAGCTGGTGCAGTCTGGAGGTGTGGTGAGGAAGCCGGGGGCCTCAGTGAAGGTCTCTTGCAAGGCTTCTGGTTACACCTTTACCAGTTAT  91
V  89.6% (259/289)  IGHV1-18*01  7    ...................C..A.....A......T....................C.............................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  L  C  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  N  T  Y  Y  T  P 
                    Query_11563  92   GGTCTCTGCTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACCTATTACACACCG  181
V  89.6% (259/289)  IGHV1-18*01  97   ...A..A.........................A...........................G................AA.C..TG...A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  A  S  M  T  I  E  T  S  M  R  T  A  Y  M  E  L  R  S  L  G  L  D  D  T  A 
                    Query_11563  182  AAGTTCCAGGGCAGAGCCTCCATGACCATAGAGACATCCATGAGGACAGCCTACATGGAACTGAGGAGCCTGGGGCTTGACGACACGGCC  271
V  89.6% (259/289)  IGHV1-18*01  187  ...C............T.A.........C...C.......C...C..............G............A.ATC.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------------------CDR3-IMGT-------------------------------
                                       V  Y  Y  C  A  R  G  E  P  P  P  L  G  D  I  M  V  V  P  D  A  I  D  V  H  Y  Y  K  G  V 
                    Query_11563  272  GTCTATTATTGTGCGAGAGGGGAGCCGCCCCCCCTGGGGGATATTATGGTTGTCCCAGACGCTATTGATGTACACTACTACAAAGGTGTG  361
V  89.6% (259/289)  IGHV1-18*01  277  ..G.....C..........-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  77.8% (21/27)    IGHD2-2*01   2    --------------------------------------.......G.A..A..A....CT.....-------------------------  28
J  94.6% (53/56)    IGHJ6*02     7    -------------------------------------------------------------------------........T.C...A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11563  362  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  400
J  94.6% (53/56)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41550840


Query= Query_65879

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           367     6e-104
IGHD3-9*01                                                                                            14.1    8.4   
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-9*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCTACG	TTTTGGCTGG	GAGAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTACGTTTTGGCTGGGAGAATGATGCACTTGATATC	ARHLRFGWENDALDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	243	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_11564  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.8% (243/251)  IGHV4-39*01  49   .........................................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11564  91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACGACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCCGTTGACACGTCC  180
V  96.8% (243/251)  IGHV4-39*01  139  ..........................................T...............................A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  H  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  R  F  G  W  E 
                    Query_11564  181  AAGAATCATTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGACATCTACGTTTTGGCTGGGAG  270
V  96.8% (243/251)  IGHV4-39*01  229  .....C..G..........A.......................................C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-9*01   12   -----------------------------------------------------------------------------.....A....---  21

                                      ----------------->                                  
                                       N  D  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11564  271  AATGATGCACTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  96.0% (48/50)    IGHJ3*02     1    --......TT..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_210840

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           339     2e-95
IGHD2-15*01                                                                                           14.1    9.8  
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	GGCC	GGATATT	CATCTGATGGACGTGAATATATGACCCCGTTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGGGCCGGATATTCATCTGATGGACGTGAATATATGACCCCGTTGTTTGACTTT	SRAGYSSDGREYMTPLFDF	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	64	5	0	92.8
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	287	252	35	0	87.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I  N  Y 
                    Query_11565  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGACAATCTCCTGCCAGGCTTCCGGTTACAGTTTTATCAACTAC  91
V  87.8% (252/287)  IGHV1-18*04  7    .................................................AGG........A.......T.......CC....C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  P  H  K  G  N  T  K  Y  A  Q 
                    Query_11565  92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAGGGGCTCGAGTGGATGGGTTGGATCGGCCCGCACAAAGGTAACACAAAATATGCACAG  181
V  87.8% (252/287)  IGHV1-18*04  97   ........C.......................A.....T...........A......A..G.TT....T...........C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  H  L  D  V  R  N  L  R  S  D  D  T  A 
                    Query_11565  182  AGTTTCCAGGGCAGAGTCACGATGACCACAGACACATTGACGGGCACAGCTCACCTGGACGTGAGGAACCTGCGATCTGACGACACGGCC  271
V  87.8% (252/287)  IGHV1-18*04  187  .AGC................C................CC...A.......CT..A....GC......G....A.................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  S  R  A  G  Y  S  S  D  G  R  E  Y  M  T  P  L  F  D  F  W  G  Q  G  T  P  V 
                    Query_11565  272  GTCTATTACTGTTCGAGGGCCGGATATTCATCTGATGGACGTGAATATATGACCCCGTTGTTTGACTTTTGGGGCCAGGGAACCCCGGTC  361
V  87.8% (252/287)  IGHV1-18*04  277  ..G.........G....-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  100.0% (7/7)     IGHD2-15*01  2    ---------------------.......--------------------------------------------------------------  8
J  90.7% (39/43)    IGHJ4*02     6    ------------------------------------------------------------.......AC................T....  35

                                                   
                                       S  V  S  S  
                    Query_11565  362  TCCGTCTCCTCAG  374
J  90.7% (39/43)    IGHJ4*02     36   A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_210841

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           375     3e-106
IGHD2-21*02                                                                                           18.0    0.66  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACTG	GGTGGGGACTACTAT	GGTCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTC	VRRLGGDYYGPFEF	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	70	4	0	94.6
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	105	9	0	92.1
CDR3-IMGT (germline)	292	298	7	6	1	0	85.7
Total	N/A	N/A	294	267	27	0	90.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  E  I  S  C  K  A  Y  G  Y  A  F  N  
                    Query_11566  5    AGGTGCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCCGGGGAGTCTCTGGAGATCTCCTGTAAGGCTTATGGATACGCCTTTAACG  94
V  90.8% (267/294)  IGHV5-51*01  2    ............................G........................A...............G..C.......AG.....C.A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  G  W  V  R  Q  K  P  E  K  G  L  D  W  M  G  V  I  Y  P  D  D  L  D  T  T  Y  
                    Query_11566  95   ACTACTGGATCGGCTGGGTGCGCCAGAAGCCCGAGAAAGGCCTGGATTGGATGGGGGTCATCTATCCTGATGACCTTGATACGACATACA  184
V  90.8% (267/294)  IGHV5-51*01  92   G..........................T.....G............G.........A............G....TC......C.G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  N  T  I  Y  L  R  W  S  S  L  K  A  S  D  
                    Query_11566  185  GTCCGTCCTTCCAAGGCCAGGTCACAATCTCAGTCGACAAGTCCATCAACACCATCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  90.8% (267/294)  IGHV5-51*01  182  .C.......................C.......C..............G....GC........A..........................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  V  R  R  L  G  G  D  Y  Y  G  P  F  E  F  W  G  Q  G  T  Q  V  T  V  S  
                    Query_11566  275  CCGCCATGTATTATTGTGTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTCTGGGGCCAGGGAACCCAGGTCACCGTCTCCT  364
V  90.8% (267/294)  IGHV5-51*01  272  .............C....C.....------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  86.7% (13/15)    IGHD2-21*02  11   -----------------------------.....T....G....----------------------------------------------  25
J  93.0% (40/43)    IGHJ4*02     6    --------------------------------------------------.....C.A.................T..............  45

                                         
                                      S  
                    Query_11566  365  CAG  367
J  93.0% (40/43)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_210842

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           377     9e-107
IGHD5-18*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	GGATACACCTATGGT	CA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGATACACCTATGGTCATGACTAC	AREGYTYGHDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	63	7	0	90
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	266	25	0	91.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  F  R  K  P  G  S  S  V  R  V  S  C  K  A  S  G  G  P  F  S  S  Y
                    Query_11567  1    GCAGCTGGTGCAGTCTGGAGCCGAGTTTAGGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGCAAGGCCTCTGGCGGCCCCTTCAGCAGTTA  90
V  91.4% (266/291)  IGHV1-69*01  6    ..................G..T...G.G.A....................A...............T.....A...A..........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  I  R  Q  A  P  G  L  G  L  E  W  M  G  G  I  I  P  I  L  G  P  A  N  Y  A  V
                    Query_11567  91   CGCTATTAGCTGGATTCGACAGGCCCCTGGACTAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCCTTGGTCCAGCAAACTACGCAGT  180
V  91.4% (266/291)  IGHV1-69*01  96   T.....C......G.G................A..................................T.....A..............CA  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  L  E  V  K  S  L  R  S  E  D  T  A
                    Query_11567  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACTTGGAGGTGAAAAGCCTGCGATCTGAGGACACGGC  270
V  91.4% (266/291)  IGHV1-69*01  186  .......................................................A.....C...GC......A................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                
                                        V  Y  Y  C  A  R  E  G  Y  T  Y  G  H  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11567  271  CGTGTATTATTGTGCGAGAGAAGGATACACCTATGGTCATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  348
V  91.4% (266/291)  IGHV1-69*01  276  .........C...........---------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                            
D  93.3% (14/15)    IGHD5-18*01  3    ----------------------.......G.......-----------------------------------------  17
J  100.0% (39/39)   IGHJ4*02     8    ---------------------------------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_210843

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           265     6e-73
IGHD3-16*02                                                                                           27.6    9e-04
IGHJ3*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	ARGLLIEDPNYVWGSFRRNHNCYTV	261	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	39	12	0	76.5
CDR2-IMGT	126	146	21	15	6	0	71.4
FR3-IMGT	147	260	114	90	24	0	78.9
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	218	49	0	81.6


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  
                    Query_11568  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCACTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGC  90
V  81.6% (218/267)  IGHV4-59*01  26   ................T..............C.........A....C.......G.......A...G..........AG....A.C....  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  R  R  L  E  W  L  G  F  F  I  S  T  G  S  T  H  Y  N  P  S  V  G  G  R  V  T  
                    Query_11568  91   AGCCTCCGGGGAGGAGACTGGAGTGGCTTGGCTTCTTCATATCCACTGGGAGCACCCACTACAACCCCTCCGTCGGGGGTCGTGTCACCC  180
V  81.6% (218/267)  IGHV4-59*01  116  ....C..A....A.G...........A....G.ATA..TAT.A..G..........A..............C..AA.A....A......A  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      L  S  G  D  M  S  R  N  Q  L  S  L  N  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  
                    Query_11568  181  TGTCAGGAGACATGTCCAGGAATCAGTTGTCTCTCAACCTCATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTC  270
V  81.6% (218/267)  IGHV4-59*01  206  .A....T.....C.....A...C.....C..C..G..G..G.G.TCT.....................GT.....A...........---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -----------------------CDR3-IMGT-------------------------------->                         
                                      L  L  I  E  D  P  N  Y  V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  Q  G  T  P  V  T  
                    Query_11568  271  TTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCAAGGGACACCGGTCACCG  360
D  94.1% (16/17)    IGHD3-16*02  14   -----------------------.............A...--------------------------------------------------  30
J  94.7% (36/38)    IGHJ3*01     13   -------------------------------------------------------------...................AT........  41

                                               
                                      V  S  S  
                    Query_11568  361  TCTCTTCAG  369
J  94.7% (36/38)    IGHJ3*01     42   .........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_210845

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           341     5e-96
IGHD2-21*02                                                                                           12.2    32   
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGCGGG	GACTGC	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCGGGGACTGCCTACTACTACGGCATGGACGTC	ARGAGTAYYYGMDV	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  N  S  G  G  Y  F  W  S  W  I  R  Q  T  P  G  K  G 
                    Query_11569  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAACAGTGGTGGTTACTTCTGGAGCTGGATCCGGCAGACCCCAGGGAAGGGA  90
V  93.6% (234/250)  IGHV4-61*08  49   ..................A.................G...G..............A...................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  M  Y  Y  S  G  S  T  D  Y  H  P  S  L  R  S  R  V  S  I  S  V  D  T  S 
                    Query_11569  91   CTGGAGTGGATTGGCTATATGTATTACAGTGGGAGCACCGATTACCACCCCTCCCTCAGGAGTCGAGTCAGCATATCAGTCGACACGTCC  180
V  93.6% (234/250)  IGHV4-61*08  139  ..............G.....C..................A.C...A............A...........C.........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  T  A  Y  Y 
                    Query_11569  181  AAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGGCGGGGACTGCCTACTAC  270
V  93.6% (234/250)  IGHV4-61*08  229  ....................G.....C...........T...............................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-21*02  17   -----------------------------------------------------------------------------......-------  22
J  98.2% (54/55)    IGHJ6*02     8    -----------------------------------------------------------------------------------.......  14

                                      -------------->                                 
                                       Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11569  271  TACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  98.2% (54/55)    IGHJ6*02     15   .....T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_210846

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           350     8e-99
IGHD6-13*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGT	GGTATAGCAGCA	CCCTTAAA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTGGTATAGCAGCACCCTTAAATACTTTGACTAC	ARGWYSSTLKYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  I  S  G  T  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11570  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCATCAGTGGTACTCACTATTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*03  49   ........................................G.......GG.T....C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  I  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11570  91   CTGGAGTGGATTGGCTACATTTATTATAGTGGGATCACCTACTACAATCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*03  139  ..............G.....C.....C.......G............C..........................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  L  T  A  A  D  T  A  V  Y  F  C  A  R  G  W  Y  S  S  T  L 
                    Query_11570  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCCCTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGGTGGTATAGCAGCACCCTT  270
V  94.8% (237/250)  IGHV4-31*03  229  .............................TG...........................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD6-13*01  2    -------------------------------------------------------------------------............-----  13

                                      -------------->                                
                                       K  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11570  271  AAATACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  317
J  100.0% (44/44)   IGHJ4*02     3    ---............................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_210847

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           378     3e-107
IGHJ6*02                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	261	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	22	2	0	91.7
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	20	1	0	95.2
FR3-IMGT	147	260	114	108	6	0	94.7
CDR3-IMGT (germline)	261	268	8	7	1	0	87.5
Total	N/A	N/A	268	255	13	0	95.1


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  
                    Query_11571  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGC  90
V  95.1% (255/268)  IGHV4-59*01  26   ................T.............................................A...G...........G...........  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  
                    Query_11571  91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCA  180
V  95.1% (255/268)  IGHV4-59*01  116  ...............................G..................A...............C.......................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  K  S  K  N  Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  
                    Query_11571  181  TATCAGTAGACAAGTCCAAGAACCAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGG  270
V  95.1% (255/268)  IGHV4-59*01  206  ............C...................C....G.....C..........................G...........G.....--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      ----CDR3-IMGT------------>                                 
                                      A  Y  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_11571  271  CCTACTCTTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  329
J  94.8% (55/58)    IGHJ6*02     5    -.....AC........................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_210849

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_11572  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_11572  91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_11572  181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_11572  271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_156920

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD3-16*02                                                                                           18.0    0.68  
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATGATAGTGGC	AGTTATCTTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGCAGTTATCTTTATTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_11573  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTACCAACTA  90
V  95.5% (278/291)  IGHV5-51*01  6    .................................................................G...........G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  D  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_11573  91   CTGGATCGACTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ........G...................................................................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  I  T  I  S  A  D  N  S  I  G  T  A  Y  L  Q  L  H  S  L  K  A  S  D  T  A
                    Query_11573  181  GTCCTTCGAAGGCCAAATCACCATCTCAGCCGACAACTCCATCGGCACCGCCTACCTGCAGTTGCACAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  .......C.......GG...................G......A..................G.AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_11573  271  CATGTATTACTGTGCGAGACATGGGGATGATAGTGGCAGTTATCTTTATTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD3-16*02  23   -------------------------------------.......G....-----------------------------------------  34
J  98.1% (53/54)    IGHJ6*02     9    -------------------------------------------------....A....................................  49

                                                   
                                        T  V  S  S 
                    Query_11573  361  CACCGTCTCCTCA  373
J  98.1% (53/54)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_156921

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTG	TACAGTTATGGTT	TCCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGTACAGTTATGGTTTCCAATACTACTTTGACTCC	ARLYSYGFQYYFDS	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  I  Y  D  Y  F  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_11574  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTATTTATGATTACTTCTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  92.0% (229/249)  IGHV4-39*01  49   ......................................C..C.G.AG.AG.....A.....G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  V  Y  Y  A  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11574  91   CTGGAGTGGATTGGGAGTGTCTATTATGCTGGGAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCCGTAGACACGTCC  180
V  92.0% (229/249)  IGHV4-39*01  139  ..................A........AG.....G.................................C.....................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       E  N  Q  F  S  L  K  M  R  S  A  T  A  A  D  T  A  V  Y  F  C  A  R  L  Y  S  Y  G  F  Q 
                    Query_11574  181  GAGAACCAGTTCTCCCTGAAAATGAGGTCTGCGACCGCCGCAGACACGGCTGTGTATTTCTGTGCGAGATTGTACAGTTATGGTTTCCAA  270
V  92.0% (229/249)  IGHV4-39*01  229  A...................GC....C....T..........................A..........---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD5-18*01  6    ------------------------------------------------------------------------.....C.......-----  18

                                      -------------->                                  
                                       Y  Y  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11574  271  TACTACTTTGACTCCTGGGGCCAGGGAGCCCTAGTCACCGTCTCCTCAG  319
J  93.8% (45/48)    IGHJ4*02     1    -............A.............A....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_156922

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*04                                                                                           375     3e-106
IGHD6-19*01                                                                                           21.8    0.044 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCG	GTGGCTGGTAC	GG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCGGTGGCTGGTACGGCTAC	ARGGGWYGY	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	265	25	0	91.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N
                    Query_11575  1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAA  90
V  91.4% (265/290)  IGHV3-11*04  6    ..........G.......G.........G..A.......A................................A......T.....GA.T.  95
                                        Q  L  V  E  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  S  S  G  G  A  N  I  Y  Y  A  D
                    Query_11575  91   CTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTGGTGGTGCTAACATATACTACGCAGA  180
V  91.4% (265/290)  IGHV3-11*04  96   .............A..................................................A.....AG..C...............  185
                                        Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  R  G  R  F  T  I  S  R  G  N  G  R  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A
                    Query_11575  181  TTCTGTGAGGGGCCGTTTCACCATCTCCAGAGGCAACGGCAGGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGC  270
V  91.4% (265/290)  IGHV3-11*04  186  C.......A......A..............G.A.....C..A................................................  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><--------CDR3-IMGT-------->                                  
                                        V  Y  Y  C  A  R  G  G  G  W  Y  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11575  271  TGTTTATTATTGTGCGCGAGGCGGTGGCTGGTACGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  344
V  91.4% (265/290)  IGHV3-11*04  276  ...G.....C......A...------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                        
D  100.0% (11/11)   IGHD6-19*01  11   -----------------------...........----------------------------------------  21
J  100.0% (38/38)   IGHJ4*02     11   ------------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_156923

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           369     2e-104
IGHD4-4*01                                                                                            19.9    0.17  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAAATCAGC	CAGTAACTAC	TCTCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAATCAGCCAGTAACTACTCTCGGCTAC	AKNQPVTTLGY	288	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	72	2	0	97.3
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	173	21	15	6	0	71.4
FR3-IMGT	174	287	114	103	11	0	90.4
CDR3-IMGT (germline)	288	291	4	4	0	0	100
Total	N/A	N/A	288	262	26	0	91


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  V  T  V  S  
                    Query_11576  4    AGGTTCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGGTCACCGTCAGTA  93
V  91.0% (262/288)  IGHV3-53*01  2    ....G.........G..............................................................T............  91
                                         V  Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  

                                      T------><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------
                                      N  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  L  S  V  M  Y  S  R  G  A  T  R  Y  A  
                    Query_11576  94   ACAACTATATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGCTCTCAGTCATGTATAGTCGTGGAGCCACAAGGTACGCAG  183
V  91.0% (262/288)  IGHV3-53*01  92   G......C....GC....................................G.......T..T.....CG....TAG....TAC.......  181
                                      S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      D  S  V  R  G  R  F  T  I  S  R  D  S  S  K  N  T  V  Y  L  Q  M  K  S  L  R  V  E  D  P  
                    Query_11576  184  ACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGAACACGGTGTATCTTCAAATGAAAAGCCTGAGAGTCGAGGACCCGG  273
V  91.0% (262/288)  IGHV3-53*01  182  .........A..........................A.............C................C..........C.......A...  271
                                      D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  

                                      -------------><-----------CDR3-IMGT----------->                                  
                                      A  V  Y  C  C  A  K  N  Q  P  V  T  T  L  G  Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_11576  274  CCGTCTATTGCTGTGCGAAAAATCAGCCAGTAACTACTCTCGGCTACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  354
V  91.0% (262/288)  IGHV3-53*01  272  ....G....A........---------------------------------------------------------------  289
                                      A  V  Y  Y  C  A                                                                 
D  100.0% (10/10)   IGHD4-4*01   7    ---------------------------..........--------------------------------------------  16
J  97.4% (37/38)    IGHJ4*02     11   -------------------------------------------...........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_156925

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD2-2*02                                                                                            14.1    8.3  
IGHJ3*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGGGCCCTAGAAG	GCTATAC	AGAG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGCCCTAGAAGGCTATACAGAGGCTTTTGATATC	ARGGALEGYTEAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  N  Y  Y  W  S  W  M  R  Q  P  P  G  K  G  L  E 
                    Query_11577  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAATTACTACTGGAGCTGGATGCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*01  49   ........................................G..G..................C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  C  F  Y  Y  G  G  N  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  V  G  T  S  K  N 
                    Query_11577  91   TGGATTGGGTGTTTCTATTACGGTGGAAACACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTGGGCACGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*01  139  ..........A.A........A....G.G....A..................................A.....A.A.............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  N  S  L  T  S  A  D  T  A  V  Y  Y  C  A  R  G  G  A  L  E  G  Y  T  E 
                    Query_11577  181  CAGTTCTCCCTGAAGCTGAACTCTCTGACGTCTGCGGACACGGCCGTATATTACTGTGCGAGAGGGGGGGCCCTAGAAGGCTATACAGAG  270
V  93.0% (227/244)  IGHV4-59*01  229  ...................G....G....CG................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD2-2*02   24   -------------------------------------------------------------------------------.......----  30

                                      ----------->                                  
                                       A  F  D  I  W  G  Q  G  T  A  V  T  V  S  S  
                    Query_11577  271  GCTTTTGATATCTGGGGCCAAGGGACAGCGGTCACCGTCTCTTCAG  316
J  95.7% (44/46)    IGHJ3*02     5    ...........................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_156926

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           349     2e-98
IGHD5-12*01                                                                                           18.0    0.60 
IGHJ2*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGAAATGTATGAT	TATAGTGGC	ACAATATAT	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGAAATGTATGATTATAGTGGCACAATATATTGGTACTTCGATCTC	ARQEMYDYSGTIYWYFDL	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  S  R  S  Y  P  W  G  W  V  R  Q  P  P  R  K  G 
                    Query_11578  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGCAGTAGGAGCTACCCCTGGGGCTGGGTCCGCCAGCCCCCACGGAAGGGG  90
V  94.4% (237/251)  IGHV4-39*01  49   ......................................C........T..T...TA..........A..............G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  N  S  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  H  T  S 
                    Query_11578  91   CTGGAGTGGATTGGGACTATCTATAATAGTGGGAGGACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTACACACGTCG  180
V  94.4% (237/251)  IGHV4-39*01  139  ................G.......T..........C.............................................G.......C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       N  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  E  M  Y  D  Y  S 
                    Query_11578  181  AACAACCAGTTCTCCCTGCAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACAAGAAATGTATGATTATAGT  270
V  94.4% (237/251)  IGHV4-39*01  229  ..G...............A....................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD5-12*01  6    ------------------------------------------------------------------------------------......  11

                                      -IMGT--------------------->                                  
                                       G  T  I  Y  W  Y  F  D  L  W  G  R  G  S  L  V  T  V  S  S  
                    Query_11578  271  GGCACAATATATTGGTACTTCGATCTCTGGGGCCGTGGCTCCCTGGTCACTGTCTCCTCAG  331
D  100.0% (9/9)     IGHD5-12*01  12   ...----------------------------------------------------------  14
J  98.0% (48/49)    IGHJ2*01     5    ------------...........................A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_156927

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           388     5e-110
IGHD3-3*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	GGAGAGTCTG	CGATTTCTGGAGTGGTTAT	CCCCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTAC	AREESLRFLEWLSPDY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  L  T  R  Y 
                    Query_11579  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTAAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTGACCAGATAT  91
V  92.8% (269/290)  IGHV1-18*01  7    ...............................................G.................T..............T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  M  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  S  N  I  N  Y  A  Q 
                    Query_11579  92   AGTATGTCTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATAGCAACATAAATTATGCACAG  181
V  92.8% (269/290)  IGHV1-18*01  97   G....CAGC....................................................C.......G.T....C...C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  L  G  R  V  T  M  T  I  D  T  S  A  N  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_11579  182  AAACTCCTGGGCAGAGTCACCATGACCATAGACACATCCGCGAACACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.8% (269/290)  IGHV1-18*01  187  ..G....A....................C..........A...G..............................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                             
                                       V  Y  Y  C  A  R  E  E  S  L  R  F  L  E  W  L  S  P  D  Y  W  G  Q  G  T  L  V  I  V  S
                    Query_11579  272  GTGTATTATTGTGCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTC  360
V  92.8% (269/290)  IGHV1-18*01  277  ........C........A..---------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-3*01   7    ------------------------------......T............----------------------------------------  25
J  97.1% (34/35)    IGHJ4*02     9    ------------------------------------------------------............................C......  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_156928

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*06                                                                                           293     2e-81
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*06	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTATGGGACAGTTGCG	GTGGCTAC	ACAAATAGGA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATTATGGGACAGTTGCGGTGGCTACACAAATAGGATACTTTGACTAC	AKDYGTVAVATQIGYFDY	230	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	20	4	0	83.3
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	103	11	0	90.4
CDR3-IMGT (germline)	230	237	8	7	1	0	87.5
Total	N/A	N/A	225	206	19	0	91.6


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  K  T  G  I  H  W  I  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_11580  13   GTCTGGATTCACCTTCAGTAAAACTGGCATTCACTGGATCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  91.6% (206/225)  IGHV3-33*06  72   ....................GCTA......G......G....................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  H  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  R  N  T  V  Y  L  Q  M  N
                    Query_11580  103  TGGGAGTAATAAATACCACGCAGACTCCGTGAAGGGCCGGTTCACCGTGTCCAGAGACAATTCCAGGAACACGGTGTATCTACAAATGAA  192
V  91.6% (206/225)  IGHV3-33*06  162  ...A............T.T....................A......A.C................A.......C.......G........  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------------------CDR3-IMGT---------------------
                                        S  L  S  V  E  D  T  A  V  Y  Y  C  A  K  D  Y  G  T  V  A  V  A  T  Q  I  G  Y  F  D  Y
                    Query_11580  193  CAGCCTGAGCGTCGAGGACACGGCTGTTTATTACTGTGCAAAAGATTATGGGACAGTTGCGGTGGCTACACAAATAGGATACTTTGACTA  282
V  91.6% (206/225)  IGHV3-33*06  252  .........A.C...............G...........G.....---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                
D  100.0% (8/8)     IGHD5-12*01  10   -------------------------------------------------------------........---------------------  17
J  100.0% (46/46)   IGHJ4*02     3    -------------------------------------------------------------------------------...........  13

                                      >                                  
                                        W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11580  283  CTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  317
J  100.0% (46/46)   IGHJ4*02     14   ...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_156929

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         333     1e-93
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGC	TGTAGTGGTGTTAACAGCTACT	GT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCTGTAGTGGTGTTAACAGCTACTGTCTACTTTGACTCC	AREAVVVLTATVYFDS	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	56	27	26	1	0	96.3
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	18	3	0	85.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  R  L  S  C  V  V  S  G  Y  S  I  S  S  D  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  
                    Query_11581    4    CCCTGAGACTCTCCTGCGTTGTCTCTGGTTACTCCATCAGCAGTGATTACTACTGGGGCTGGATCCGGCAGCCCCCTGGGAAGGGGCTGG  93
V  93.1% (230/247)  IGHV4-38-2*02  50   .....TCC...A.....AC..........................G..............................A.............  139
                                           L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  G  S  V  Y  H  S  G  I  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  
                    Query_11581    94   AATGGATTGGGAGTGTCTATCATAGTGGCATCACCTACGACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGA  183
V  93.1% (230/247)  IGHV4-38-2*02  140  .G............A.............G.G.......T...................................................  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                        N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  V  V  V  L  T  A  
                    Query_11581    184  ACCAGTTCTCCCTAAAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGAAGCTGTAGTGGTGTTAACAGCTA  273
V  93.1% (230/247)  IGHV4-38-2*02  230  .............G........C..............A...........G.................-----------------------  296
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                          
D  86.4% (19/22)    IGHD2-15*01    8    ----------------------------------------------------------------------..........G..G.T....  27

                                        ---------------->                                  
                                        T  V  Y  F  D  S  W  G  Q  G  A  L  V  S  V  S  S  
                    Query_11581    274  CTGTCTACTTTGACTCCTGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  324
D  86.4% (19/22)    IGHD2-15*01    28   ..-------------------------------------------------  29
J  93.6% (44/47)    IGHJ4*02       2    ----...........A.............A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_270010

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            357     1e-100
IGHD3-10*01                                                                                           31.5    5e-05 
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTTCAAGGACAC	ATTACAATGGTTCGGGGAG	CCCCCCC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGAGTTCAAGGACACATTACAATGGTTCGGGGAGCCCCCCCACTTCGGTTTGGACGTC	VREFKDTLQWFGEPPHFGLDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11582  1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGACAAGCTCCAGGGAAGGGCCTGG  90
V  95.6% (239/250)  IGHV3-9*01   47   ........................C..........................................G......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  K  N  S  T  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11582  91   AGTGGGTCTCAGGTATTAGCTGGAAAAATTCTACCATAGGATATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (239/250)  IGHV3-9*01   137  ...................T.....T.G.GG..G......C.................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  V  R  E  F  K  D  T  L  Q  
                    Query_11582  181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGTAAGAGAGTTCAAGGACACATTACAAT  270
V  95.6% (239/250)  IGHV3-9*01   227  ...............................................................C..A...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  94.7% (18/19)    IGHD3-10*01  3    ----------------------------------------------------------------------------------.....T..  10

                                      DR3-IMGT-------------------------->                                 
                                      W  F  G  E  P  P  H  F  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11582  271  GGTTCGGGGAGCCCCCCCACTTCGGTTTGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTCCTCA  338
D  94.7% (18/19)    IGHD3-10*01  11   ...........---------------------------------------------------------  21
J  94.0% (47/50)    IGHJ6*02     13   ------------------...A....A................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_126220

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           305     3e-85
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TCGGGA	TGGCTACAATT	TTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATCGGGATGGCTACAATTTTCTTGACTCC	ARDRDGYNFLDS	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	43	8	0	84.3
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	223	28	0	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  L  I  N  G  G  N  Y  W  S  W  I  R  Q  R  P  G  K  E 
                    Query_11583  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCCTCATCAATGGCGGTAACTACTGGAGTTGGATCCGCCAGCGCCCGGGGAAGGAG  90
V  88.8% (223/251)  IGHV4-31*03  49   ...............................G....A...G..G...T...T..........C.............A...A.......GC  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  T  Y  Y  S  G  K  T  Q  Y  N  P  S  L  K  G  R  L  T  I  S  P  D  T  S 
                    Query_11583  91   TTGGAGTGGATTGGCTATACCTATTACAGTGGGAAGACCCAGTACAACCCGTCCCTCAAGGGTCGACTCACCATATCACCTGACACGTCT  180
V  88.8% (223/251)  IGHV4-31*03  139  C.............G..C.T..............GC...T.C..................A.....G.T.........GTA.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  D  R  D  G  Y  N  F 
                    Query_11583  181  AAGAACCAGTTCTCCCTGAAGCTGAGTTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGATCGGGATGGCTACAATTTT  270
V  88.8% (223/251)  IGHV4-31*03  229  ..........................C...............................A.........A..-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD5-12*01  11   -----------------------------------------------------------------------------.......G...--  21

                                      -------->                                  
                                       L  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_11583  271  CTTGACTCCTGGGGCCAGGGGATCCTGGTCACCGTCTCCTCAG  313
J  92.9% (39/42)    IGHJ4*02     7    -......A............A.C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_333215

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           441     6e-126
IGHD2-2*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	CG	GGACATTGTAGTAGTAGCAGCTGC	CAGGCGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGCGGGACATTGTAGTAGTAGCAGCTGCCAGGCGCACTACTACGGTATGGACGTC	AGAGHCSSSSCQAHYYGMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	286	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_11584  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  98.6% (286/290)  IGHV1-69*06  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q
                    Query_11584  91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGCACAGCAAACTACGCACA  180
V  98.6% (286/290)  IGHV1-69*06  96   ........................................................................T.................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  G  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_11584  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGGCAAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  98.6% (286/290)  IGHV1-69*06  186  ................................A.........................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        V  Y  Y  C  A  G  A  G  H  C  S  S  S  S  C  Q  A  H  Y  Y  G  M  D  V  W  G  Q  G  T  T
                    Query_11584  271  CGTGTATTACTGTGCGGGAGCGGGACATTGTAGTAGTAGCAGCTGCCAGGCGCACTACTACGGTATGGACGTCTGGGGCCAAGGAACCAC  360
V  98.6% (286/290)  IGHV1-69*06  276  ................A...----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  91.7% (22/24)    IGHD2-2*01   2    ----------------------...T............C.......--------------------------------------------  25
J  96.2% (51/53)    IGHJ6*02     10   -----------------------------------------------------...............................G.....  46

                                                      
                                        A  T  V  S  S 
                    Query_11584  361  GGCCACCGTCTCCTCA  376
J  96.2% (51/53)    IGHJ6*02     47   ..T.............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_111409

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           324     8e-91
IGHD3-9*01                                                                                            43.0    2e-08
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACCTC	GTATTACGATATTTTGACTGATTAT	AAAAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACCTCGTATTACGATATTTTGACTGATTATAAAACCTACGACTATTACGGAATGGACGTC	ARDTSYYDILTDYKTYDYYGMDV	241	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	126	24	18	6	0	75
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	248	8	7	1	0	87.5
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_11585  2    CCCTGTCCCTCACCTGCGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  91.9% (227/247)  IGHV3-23*01  50   .....AGA...T....T......................................C..................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  G  I  N  G  G  G  S  K  T  Y  Y  A  E  S  A  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_11585  92   GGGTCTCAGGTATAAATGGTGGTGGTAGTAAGACATATTACGCAGAGTCCGCGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGA  181
V  91.9% (227/247)  IGHV3-23*01  140  .........C...T.G....A.....G...GC.....C........C....T......................................  229
                                      W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------------C
                                      N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  R  D  T  S  Y  Y  D  I  L  
                    Query_11585  182  ACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCCTATATTATTGTGCGAGAGATACCTCGTATTACGATATTTTGA  271
V  91.9% (227/247)  IGHV3-23*01  230  .................................C.............G.......C.......A...-----------------------  296
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                          
D  96.0% (24/25)    IGHD3-9*01   1    -------------------------------------------------------------------------.................  17

                                      DR3-IMGT----------------------------->                                 
                                      T  D  Y  K  T  Y  D  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11585  272  CTGATTATAAAACCTACGACTATTACGGAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  342
D  96.0% (24/25)    IGHD3-9*01   18   ...G....---------------------------------------------------------------  25
J  94.8% (55/58)    IGHJ6*02     5    -------------....T....C.....T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_126223

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*03                                                                                           305     3e-85
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	GGGG	GCACTGGCTGG	CTGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGGGGCACTGGCTGGCTGAATGACTTC	AGGTGWLNDF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	220	25	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  T  S  R  F  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11586  1    GGTCCCTGAGACTCTCCTGTGCAGTGTCTGGGTTCACCACCAGTCGTTTCTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGTCTGG  90
V  89.8% (220/245)  IGHV3-74*03  47   ........................CC.....A......TT....A.C.A....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  L  I  L  S  D  G  S  D  A  T  Y  A  D  S  V  K  G  R  F  T  I  S  I  D  N  A  
                    Query_11586  91   TGTGGGTCTCACTTATTCTGAGTGATGGGAGTGACGCAACGTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCATCGACAACGCCA  180
V  89.8% (220/245)  IGHV3-74*03  137  ............G....AAT............AG.A..........................................GA..........  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  V  F  L  Q  M  D  S  L  R  D  E  D  T  A  V  Y  Y  C  A  G  G  T  G  W  L  N  D  
                    Query_11586  181  AGAACACGGTCTTTCTGCAAATGGACAGTCTGAGAGACGAGGACACGGCTGTTTATTATTGTGCAGGGGGCACTGGCTGGCTGAATGACT  270
V  89.8% (220/245)  IGHV3-74*03  227  ........C.G.A..........A............C...............G.....C......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.9% (10/11)    IGHD6-19*01  8    ---------------------------------------------------------------------...G.......----------  18
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11586  271  TCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_126225

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            382     4e-108
IGHD2-2*01                                                                                            10.3    134   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAATAGGAATTCTTG	CCAGC	ACCCCCCTTG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATAATAGGAATTCTTGCCAGCACCCCCCTTGCGGTATGGACGTC	ARDNRNSCQHPPCGMDV	273	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	25	2	0	92.6
FR3-IMGT	159	272	114	102	12	0	89.5
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	280	262	18	0	93.6


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  D  S  A  T  W  N  W  
                    Query_11587  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGCGACAGTGTCTCTAGCGACAGTGCTACCTGGAACTGGA  90
V  93.6% (262/280)  IGHV6-1*01   26   ....................................................G...............A........G.T..........  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  E  W  Y  N  D  S  A  M  S  V  K  
                    Query_11587  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCTGAGTGGTATAATGATTCTGCAATGTCTGTGAAAG  180
V  93.6% (262/280)  IGHV6-1*01   116  .......................................................CA...............A....G.A.........A  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      G  R  V  T  I  N  P  D  T  S  K  Q  Q  F  S  L  H  L  I  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_11587  181  GTCGAGTAACCATCAACCCAGACACATCCAAGCAGCAGTTCTCCCTGCATCTGATTTCTGTGACTCCCGAGGACACAGCTGTGTATTATT  270
V  93.6% (262/280)  IGHV6-1*01   206  .....A..........................A.C..............G....AC....................G...........C.  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><--------------------CDR3-IMGT-------------------->                                 
                                      C  A  R  D  N  R  N  S  C  Q  H  P  P  C  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11587  271  GTGCAAGAGATAATAGGAATTCTTGCCAGCACCCCCCTTGCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  356
V  93.6% (262/280)  IGHV6-1*01   296  ..........----------------------------------------------------------------------------  305
                                      C  A  R                                                                               
D  100.0% (5/5)     IGHD2-2*01   18   -------------------------.....--------------------------------------------------------  22
J  100.0% (46/46)   IGHJ6*02     17   ----------------------------------------..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_126226

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           325     2e-91
IGHD6-25*01                                                                                           10.3    116  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GCCGGGATT	CAGCG	AAATCAGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGCCGGGATTCAGCGAAATCAGGCTAC	ATGRDSAKSGY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  Y  H  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11588  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACTGTCAGCAGCTACCACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTG  90
V  92.3% (227/246)  IGHV3-53*01  47   .....................................C.....T...A..T......G..............................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  T  I  Y  I  D  A  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  K  
                    Query_11588  91   AGTGGGTCTCAACTATCTATATCGATGCTACCACATACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACTATTCCAAGA  180
V  92.3% (227/246)  IGHV3-53*01  137  ...........GT...T....G..G..G..G............A....................................A.........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  T  G  R  D  S  A  K  S  G  
                    Query_11588  181  ACACACTGTATCTTCAGATGAACACCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGACAGGCCGGGATTCAGCGAAATCAGGCT  270
V  92.3% (227/246)  IGHV3-53*01  227  ....G...........A.......G......................................G..------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (5/5)     IGHD6-25*01  9    ---------------------------------------------------------------------------.....----------  13
J  100.0% (38/38)   IGHJ4*02     11   ----------------------------------------------------------------------------------------..  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11588  271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (38/38)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_126227

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD6-13*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	ARHRYLGPRQQATENDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  Q  G  S  G  Y  T  F  S  T  Y
                    Query_11589  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTTCCACCTA  90
V  95.9% (279/291)  IGHV5-51*01  6    ..........................................G..................A...............G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  V  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_11589  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGTTGGGAGTCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G.....................................A....GA.......................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11589  181  GTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  ......................A...........................................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_11589  271  CATGTATTACTGTGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  95.9% (279/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-13*01  8    ---------------------------------------.......--------------------------------------------  14
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_11589  361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_126229

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           336     1e-94
IGHD2-2*01                                                                                            23.8    0.011
IGHJ5*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GAGGGAGTGCG	GTAGTATCAGCTGCT	TTCGGGGT	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGAGGGAGTGCGGTAGTATCAGCTGCTTTCGGGGTCAACTGGTTCGACCCC	AKGGSAVVSAAFGVNWFDP	239	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	10	1	0	90.9
CDR1-IMGT	26	49	24	24	0	0	100
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	21	3	0	87.5
FR3-IMGT	125	238	114	111	3	0	97.4
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	231	223	8	0	96.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  P  G  F  T  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  
                    Query_11590  15   GTGCAGCCCCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTA  104
V  96.5% (223/231)  IGHV3-23*01  65   ........T..............................G..................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  A  A  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  E  N  T  L  Y  L  
                    Query_11590  105  GTGGTAGTGGTGCTGCCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCGAGAACACGCTGTATTTGC  194
V  96.5% (223/231)  IGHV3-23*01  155  ............G.AG.......................................................A..............C...  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------------CDR3-IMGT-------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  G  S  A  V  V  S  A  A  F  G  V  N  
                    Query_11590  195  AAATGAACAGCCTGAGAGCCGAAGACACGGCCGTATATTACTGTGCGAAAGGAGGGAGTGCGGTAGTATCAGCTGCTTTCGGGGTCAACT  284
V  96.5% (223/231)  IGHV3-23*01  245  ......................G............................---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  93.3% (14/15)    IGHD2-2*01   12   --------------------------------------------------------------......C........-------------  26
J  100.0% (50/50)   IGHJ5*02     2    -------------------------------------------------------------------------------------.....  6

                                      ---------->                                  
                                      W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11590  285  GGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  329
J  100.0% (50/50)   IGHJ5*02     7    .............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_333217

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*05                                                                                           341     5e-96
IGHD6-13*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*05	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	N/A	GCAGCAGATGG	CATCTCCGGGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGAGCAGCAGATGGCATCTCCGGGGTTTGACTCC	ATEQQMASPGFDS	249	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	105	9	0	92.1
CDR3-IMGT (germline)	249	256	8	6	2	0	75
Total	N/A	N/A	256	237	19	0	92.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11591  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTCACGCCTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.6% (237/256)  IGHV3-15*05  47   .......T....................................A............G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  K  K  T  D  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_11591  91   AGTGGGTTGGCCGTATTAAAAAGAAGACTGACGGTGAGACAACAGACTACGCTGCGCCCGTTAAAGGCAGATTCACCATCTCAAGAGATG  180
V  92.6% (237/256)  IGHV3-15*05  137  .....................GC..A.....T....G..................A.....G............................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      D  S  K  A  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  G  V  Y  Y  C  A  T  E  Q  Q  M  A  
                    Query_11591  181  ATTCAAAGGCCACATTGTATCTGCAAATGAACAGTCTGAAAACCGAGGACACAGGTGTGTATTACTGTGCGACAGAGCAGCAGATGGCAT  270
V  92.6% (237/256)  IGHV3-15*05  227  .......AAA...GC.......................................CC............A.C.....--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  90.9% (10/11)    IGHD6-13*01  8    ----------------------------------------------------------------------------.......C...---  18

                                      GT-------------->                                  
                                      S  P  G  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11591  271  CTCCGGGGTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.7% (42/43)    IGHJ4*02     6    --------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_132452

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-3*01                                                                                            37.2    1e-06
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTCGGGGGACACGA	ATTACGATTTTTGGAGTGG	GGGTGTTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATTCGGGGGACACGAATTACGATTTTTGGAGTGGGGGTGTTCTTGATATC	AKDSGDTNYDFWSGGVLDI	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11592  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGTTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ..............................................C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  F  N  T  N  Y  A  E  S  E  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11592  91   AGTGGGTCTCAGGTATTAGTGGCAGTGGTTTTAATACAAACTATGCAGAGTCCGAGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  ............C.........T......GG..GC...T....C.....C....T...............................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  D  S  G  D  T  N  Y  
                    Query_11592  181  AGAACACCCTGTATCTACAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTATATTACTGTGCGAAAGATTCGGGGGACACGAATTACG  270
V  93.6% (234/250)  IGHV3-23*01  227  .......G........G...................C.................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (19/19)   IGHD3-3*01   3    ------------------------------------------------------------------------------------......  8

                                      -IMGT----------------------->                                  
                                      D  F  W  S  G  G  V  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11592  271  ATTTTTGGAGTGGGGGTGTTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  333
D  100.0% (19/19)   IGHD3-3*01   9    .............--------------------------------------------------  21
J  100.0% (42/42)   IGHJ3*02     9    ---------------------..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_132453

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-10*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTATCGTTCGGGGACTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATCGTTCGGGGACTTATTTTGACTAC	ARGLYYYRSGTYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_11593  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ...................................................T.........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_11593  91   CTGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAATTACCATATCAGTAGACACCTCC  180
V  96.4% (241/250)  IGHV4-31*03  139  ...............T..................................................G...................G..T  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  N  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  R  S 
                    Query_11593  181  AAGAACCAGTTCTCCCTGAACCTGAGGTCTGCGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCTCTATTACTATCGTTCG  270
V  96.4% (241/250)  IGHV4-31*03  229  ....................G.....C....T......................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (22/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------.........G.....  16

                                      ----------------->                                  
                                       G  T  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11593  271  GGGACTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  91.7% (22/24)    IGHD3-10*01  17   ....G....-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    ---------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_132450

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            293     2e-81
IGHD3-9*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGTCGCG	GTATTACGATATTTTG	TAGAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGTCGCGGTATTACGATATTTTGTAGACGACTAC	AREVAVLRYFVDDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	22	4	0	84.6
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	24	18	3	3	75
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	247	219	25	3	88.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  Y  S  F  S  S  H  W  M  S  W  V  R  L  A  P  G  K  G  L  E  
                    Query_11594  2    CCCTGTCCCTCACCTGTGCAGCCTCTGGATATTCCTTCAGTAGTCATTGGATGAGCTGGGTCCGCCTGGCTCCAGGGAAGGGGCTGGAGT  91
V  88.7% (219/247)  IGHV3-7*01   50   .....AGA...T..................TCA....T.....CT.....................A.......................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  A  S  I  K  Q  D  G  S     K  F  Y  M  D  S  V  T  G  R  F  T  I  S  R  D  N  A  K  
                    Query_11594  92   GGGTGGCCAGCATAAAACAGGATGGCAGT---AAATTCTACATGGACTCTGTGACGGGCCGATTCACCATCTCCCGAGACAACGCCAAGA  178
V  88.7% (219/247)  IGHV3-7*01   140  .........A......G..A.....A...GAG....A...TG............A...................A...............  229
                                      W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  S  L  D  L  Q  M  N  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  E  V  A  V  L  R  Y  F  
                    Query_11594  179  ACTCACTGGATCTGCAAATGAACAACTTGAGAGTCGAGGACACGGCTGTCTATTACTGTGCGAGAGAGGTCGCGGTATTACGATATTTTG  268
V  88.7% (219/247)  IGHV3-7*01   230  ........T...............G.C......C...............G.................-----------------------  296
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (16/16)   IGHD3-9*01   1    --------------------------------------------------------------------------................  16

                                      ---------->                                  
                                      V  D  D  Y  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_11594  269  TAGACGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  313
J  97.5% (39/40)    IGHJ4*02     9    -----....................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_132451

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     1e-124
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_11595  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  98.3% (284/289)  IGHV5-51*01  6    .............................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_11595  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11595  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11595  271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_11595  361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_306048

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD1-26*01                                                                                           10.3    112  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCGGAAGAA	GGGAG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGGAAGAAGGGAGATTGACTAC	AGGRREIDY	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	225	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  N  H  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11596  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTAATCACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.8% (225/240)  IGHV4-59*01  49   ........................................G..G.T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  D  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11596  91   TGGATTGGGTATCTTTATTACGATGGTGACACCAAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  93.8% (225/240)  IGHV4-59*01  139  ............A.C......AG...GAG......C......................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  G  R  R  E  I  D  Y  W  G 
                    Query_11596  181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGGGCGGAAGAAGGGAGATTGACTACTGGGGC  270
V  93.8% (225/240)  IGHV4-59*01  229  ...............C...............................G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  9    ----------------------------------------------------------------------.....---------------  13
J  100.0% (42/42)   IGHJ4*02     7    ----------------------------------------------------------------------------..............  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_11596  271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  100.0% (42/42)   IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_323821

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            297     7e-83
IGHD2-21*01                                                                                           12.2    31   
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	TGGTGA	AGTATTCCTTGGATC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGGTGAAGTATTCCTTGGATCACTTTGACCAC	ARLVKYSLDHFDH	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	20	7	0	74.1
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	219	29	0	88.3


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  S  V  S  G  D  S  I  T  N  D  H  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_11597  1    GGTCCCTGAGACTCTCCTGCAGTGTCTCTGGTGACTCCATTACCAATGATCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  88.3% (219/248)  IGHV4-4*02   47   ..A.....TCC...A.....GC...........G......C.G..G.AG.A.......................................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  R  S  G  S  T  T  Y  N  P  S  L  Q  S  R  V  A  F  S  V  D  K  S  
                    Query_11597  91   TGGAGTGGATTGGAGAAATCTATCGTAGTGGGAGCACCACTTACAACCCGTCCCTTCAGAGTCGAGTCGCCTTCTCAGTAGACAAGTCCA  180
V  88.3% (219/248)  IGHV4-4*02   137  .............G..........A..............AC..............CA...........A..A.A................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  Q  F  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  V  K  Y  S  L  D  
                    Query_11597  181  AGAACCAGTTCTCCCTGAGTCTGAGATCTGTGACCGCCGCCGATACGGCCGTATATTACTGTGCGAGATTGGTGAAGTATTCCTTGGATC  270
V  88.3% (219/248)  IGHV4-4*02   227  ..................AG.....C..............G..C........G...............----------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*01  13   ---------------------------------------------------------------------......---------------  18

                                      ---------->                                  
                                      H  F  D  H  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_11597  271  ACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  315
J  95.6% (43/45)    IGHJ4*02     4    ........T................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_306045

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD3-3*01                                                                                            33.4    2e-05 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGGGGGGCCTT	CGATTTTTGGAGTGGTT	TCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGGGGGGCCTTCGATTTTTGGAGTGGTTTCCACTTTGACTCC	ARLGGAFDFWSGFHFDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  T  S  G  Y  S  F  T  T  H
                    Query_11598  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGCTTTACCACCCA  90
V  94.5% (274/290)  IGHV5-51*01  6    .............................A..................................GG....................G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  M  G  I  I  Y  P  G  V  S  D  T  R  Y  R  P
                    Query_11598  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACATGGGGATCATCTATCCTGGTGTCTCTGATACCAGATACAGACC  180
V  94.5% (274/290)  IGHV5-51*01  96   ........G...................................GG......................A..................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  A
                    Query_11598  181  GTCCTTCCAAGGCCAAGTCACCATCTCAGCCGACAAGTCCGTCAGTACCGCCTACCTGCAGTGGAGGAGCTTGAAGGCCTCGGACACCGC  270
V  94.5% (274/290)  IGHV5-51*01  186  ...............G........................A....C....................C...C...................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  L  G  G  A  F  D  F  W  S  G  F  H  F  D  S  W  G  Q  G  T  L  V  T  V
                    Query_11598  271  CATGTATTATTGTGCGAGACTAGGGGGGGCCTTCGATTTTTGGAGTGGTTTCCACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGT  360
V  94.5% (274/290)  IGHV5-51*01  276  .........C..........----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD3-3*01   7    ---------------------------------.................----------------------------------------  23
J  97.8% (44/45)    IGHJ4*02     4    -----------------------------------------------------.........A...........................  40

                                              
                                        S  S  
                    Query_11598  361  CTCCTCAG  368
J  97.8% (44/45)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_306046

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-19*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCG	GCAGTGGCTGGTAC	GGGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCGGCAGTGGCTGGTACGGGATTGACTAC	AKDRGSGWYGIDY	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_11599  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGCTGGATCCGGCAGACCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   .............................................T.......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_11599  91   TGGATTGGGTATATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ....................C...................................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  D  R  G  S  G  W  Y  G  I 
                    Query_11599  181  CAGTTCTCCCTGAGGCTGAACTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAAAGATCGCGGCAGTGGCTGGTACGGGATT  270
V  96.7% (237/245)  IGHV4-59*01  229  .............A.....G...........................G.............G...-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (14/14)   IGHD6-19*01  8    ----------------------------------------------------------------------..............------  21
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_11599  271  GACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  310
J  97.6% (41/42)    IGHJ4*02     9    ...................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_306047

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            313     1e-87
IGHD3-10*01                                                                                           37.2    9e-07
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCATCG	CTATGGTTCGGGGAGTTAT	GC	TGATA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCATCGCTATGGTTCGGGGAGTTATGCTGATATG	ARGHRYGSGSYADM	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	243	117	105	9	3	89.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	227	20	3	90.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Q  I  W  W  S  W  V  R  Q  A  P  G  K  G  L 
                    Query_11600  1    ACCCTGTCCCTCACCTGCACTGTTTCTGGTGGCTCCATCAGCAGTCAGATCTGGTGGAGTTGGGTCCGCCAGGCCCCAGGGAAGGGGCTT  90
V  90.8% (227/250)  IGHV4-4*01   49   ..................G....C.....................AGT.A......................C................G  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><-----------------------------------------------------
                                       E  W  I  G  E  I  L  H  S  G  S  T  T  T  Y  I  P  S  L  E  S  R  V  T  I  S  I  D  K  S 
                    Query_11600  91   GAGTGGATTGGGGAAATCCTTCATAGCGGGAGCACCACCACTTACATCCCGTCCCTCGAGAGTCGAGTCACCATCTCAATCGACAAGTCC  180
V  90.8% (227/250)  IGHV4-4*01   139  ..................TA......T..........A.---....A..........A................A...G.A.........  225
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N     Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 

                                      FR3-IMGT------------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  R  Y  G  S  G 
                    Query_11600  181  AAGAACCAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCATCGCTATGGTTCGGGG  270
V  90.8% (227/250)  IGHV4-4*01   226  ...................A......C...............................G...........--------------------  295
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                      
D  100.0% (19/19)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      -------------->                                  
                                       S  Y  A  D  M  W  G  R  G  T  M  V  T  V  S  S  
                    Query_11600  271  AGTTATGCTGATATGTGGGGCCGCGGGACAATGGTCACCGTCTCTTCAG  319
D  100.0% (19/19)   IGHD3-10*01  20   ......-------------------------------------------  25
J  92.7% (38/41)    IGHJ3*02     10   --------......C.......AA.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_306040

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           339     2e-95
IGHD2-15*01                                                                                           14.1    9.8  
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	GGCC	GGATATT	CATCTGATGGACGTGAATATATGACCCCGTTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGGGCCGGATATTCATCTGATGGACGTGAATATATGACCCCGTTGTTTGACTTT	SRAGYSSDGREYMTPLFDF	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	64	5	0	92.8
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	287	252	35	0	87.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I  N  Y 
                    Query_11601  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGACAATCTCCTGCCAGGCTTCCGGTTACAGTTTTATCAACTAC  91
V  87.8% (252/287)  IGHV1-18*04  7    .................................................AGG........A.......T.......CC....C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  P  H  K  G  N  T  K  Y  A  Q 
                    Query_11601  92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAGGGGCTCGAGTGGATGGGTTGGATCGGCCCGCACAAAGGTAACACAAAATATGCACAG  181
V  87.8% (252/287)  IGHV1-18*04  97   ........C.......................A.....T...........A......A..G.TT....T...........C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  H  L  D  V  R  N  L  R  S  D  D  T  A 
                    Query_11601  182  AGTTTCCAGGGCAGAGTCACGATGACCACAGACACATTGACGGGCACAGCTCACCTGGACGTGAGGAACCTGCGATCTGACGACACGGCC  271
V  87.8% (252/287)  IGHV1-18*04  187  .AGC................C................CC...A.......CT..A....GC......G....A.................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  S  R  A  G  Y  S  S  D  G  R  E  Y  M  T  P  L  F  D  F  W  G  Q  G  T  P  V 
                    Query_11601  272  GTCTATTACTGTTCGAGGGCCGGATATTCATCTGATGGACGTGAATATATGACCCCGTTGTTTGACTTTTGGGGCCAGGGAACCCCGGTC  361
V  87.8% (252/287)  IGHV1-18*04  277  ..G.........G....-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  100.0% (7/7)     IGHD2-15*01  2    ---------------------.......--------------------------------------------------------------  8
J  90.7% (39/43)    IGHJ4*02     6    ------------------------------------------------------------.......AC................T....  35

                                                   
                                       S  V  S  S  
                    Query_11601  362  TCCGTCTCCTCAG  374
J  90.7% (39/43)    IGHJ4*02     36   A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_306041

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         290     2e-80
IGHD3-9*01                                                                                            14.1    8.7  
IGHJ2*01                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGACCGATAC	TGACTGG	GGTGGTCACACAGGGCTCTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACCGATACTGACTGGGGTGGTCACACAGGGCTCTTCTGGTACTTCGATCTC	AKTDTDWGGHTGLFWYFDL	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	56	27	25	2	0	92.6
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	14	7	0	66.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	243	214	29	0	88.1


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  R  L  S  C  A  V  S  G  Y  S  I  N  N  G  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  L  
                    Query_11602    4    CCCTGAGACTCTCCTGCGCTGTGTCTGGTTACTCCATCAACAATGGTTACTACTGGGGCTGGCTCCGGCAGCCCCCAGGAAAGGGGCTGG  93
V  88.1% (214/243)  IGHV4-38-2*01  50   .....TCC...A..........C................G..G...................A................G..........  139
                                           L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  G  S  V  Y  H  R  G  D  A  Y  Y  N  P  S  L  K  S  R  V  T  V  S  M  D  T  S  S  
                    Query_11602    94   AGTGGATTGGGAGTGTCTATCATCGCGGGGACGCGTACTACAATCCGTCCCTCAAGAGTCGAGTCACCGTCTCAATGGACACGTCCAGTA  183
V  88.1% (214/243)  IGHV4-38-2*01  140  ..............A........A.T...AG.A.C........C........................A.A...G.A..........AG.  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><-----------------------CDR3-IM
                                        N  Q  V  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  T  D  T  D  W  G  G  H  
                    Query_11602    184  ATCAGGTCTCCCTGAGCCTGAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAAGACCGATACTGACTGGGGTGGTCACA  273
V  88.1% (214/243)  IGHV4-38-2*01  230  .C...T.........AG.....C...............................A........---------------------------  292
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                             
D  100.0% (7/7)     IGHD3-9*01     15   -------------------------------------------------------------------------.......----------  21

                                        GT----------------------->                                  
                                        T  G  L  F  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11602    274  CAGGGCTCTTCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  333
J  100.0% (50/50)   IGHJ2*01       4    ----------..................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_306043

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           350     9e-99
IGHD3-16*01                                                                                           18.0    0.66 
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCATTGG	TGCAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGGTGCATTTGATCTC	ARRGSDGLIGAFDL	286	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	68	3	0	95.8
CDR1-IMGT	79	102	24	17	7	0	70.8
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	285	114	95	13	6	83.3
CDR3-IMGT (germline)	286	291	6	6	0	0	100
Total	N/A	N/A	290	259	25	6	89.3


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P  R  
                    Query_11603  8    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCCGTT  97
V  89.3% (259/290)  IGHV5-51*03  5    ........................................................T.....A....T..........GC..TA..A.C.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  S  
                    Query_11603  98   ATTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGTC  187
V  89.3% (259/290)  IGHV5-51*03  95   .C........C.......................................................G.....................C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D  T  
                    Query_11603  188  CGGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACACTG  271
V  89.3% (259/290)  IGHV5-51*03  185  ..T.....C.A...................C...C........CAGCACC.C...............C..C.................C.  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                  
                                      A  I  Y  Y  C  A  R  R  G  S  D  G  L  I  G  A  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11603  272  CCATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGGTGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  361
V  89.3% (259/290)  IGHV5-51*03  275  ....G........T......----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD3-16*01  18   ---------------------........T...---------------------------------------------------------  29
J  93.6% (44/47)    IGHJ3*01     4    -------------------------------------------...T......G.................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_220661

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           405     4e-115
IGHD5-12*01                                                                                           14.1    9.9   
IGHJ3*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTGTCCGTTTCGTAGAGATGC	CTACAATTAC	CGGGCCCCC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTGTCCGTTTCGTAGAGATGCCTACAATTACCGGGCCCCCGATGCTTTTGATATC	ARDCPFRRDAYNYRAPDAFDI	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  T  V  S  C  K  A  S  G  G  T  F  S  S  F
                    Query_11604  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGACGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTT  90
V  94.5% (275/291)  IGHV1-69*01  6    ..................G...............................A......................................A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        I  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  V  I  P  T  F  G  T  T  N  S  A  Q
                    Query_11604  91   TATTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGGTCATCCCTACCTTTGGTACCACAAACTCCGCACA  180
V  94.5% (275/291)  IGHV1-69*01  96   .GC....................................................A.........T.........AG......A......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  V  S  T  S  T  A  Y  M  V  L  S  S  L  T  S  A  D  A  A
                    Query_11604  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGTTTCCACGAGCACAGCCTACATGGTGCTGAGCAGCCTGACATCTGCGGACGCGGC  270
V  94.5% (275/291)  IGHV1-69*01  186  ...................................AA......................A..............G.....A....A....  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        V  Y  Y  C  A  R  D  C  P  F  R  R  D  A  Y  N  Y  R  A  P  D  A  F  D  I  W  G  Q  G  T
                    Query_11604  271  CGTGTATTACTGTGCGAGAGATTGTCCGTTTCGTAGAGATGCCTACAATTACCGGGCCCCCGATGCTTTTGATATCTGGGGCCAAGGGAC  360
V  94.5% (275/291)  IGHV1-69*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  90.0% (9/10)     IGHD5-12*01  14   ------------------------------------------....G.....--------------------------------------  23
J  100.0% (49/49)   IGHJ3*02     2    -------------------------------------------------------------.............................  30

                                                          
                                        M  V  T  V  S  S  
                    Query_11604  361  AATGGTCACCGTCTCTTCAG  380
J  100.0% (49/49)   IGHJ3*02     31   ....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_333212

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           352     3e-99
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCG	TACGGTGGCTAC	ATGAGAC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCGTACGGTGGCTACATGAGACACTTTGACTAC	ARVPYGGYMRHFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11605  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATAACTATGAGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-48*03  47   ..........................................G..GT.....A.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  I  S  Y  I  S  S  S  G  R  T  I  D  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_11605  91   AGTATATTTCATACATTAGTAGTAGTGGTAGAACCATAGACTACGCAGACTCTGTGAGGGGCCGCTTCACCATCTCCAGAGACAACGCCG  180
V  95.2% (237/249)  IGHV3-48*03  137  ...GGG.........................T......T..................A......A........................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  Y  G  G  Y  M  
                    Query_11605  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGTCCCGTACGGTGGCTACATGA  270
V  95.2% (237/249)  IGHV3-48*03  227  .....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD4-17*01  5    --------------------------------------------------------------------------.......A....----  16

                                      ------------->                                  
                                      R  H  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_11605  271  GACACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  318
J  97.8% (44/45)    IGHJ4*02     4    ---........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_123766

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           338     4e-95
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GTTAGGGGGAG	AGGACCAATGGGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTAGGGGGAGAGGACCAATGGGGGGACTACCTTGACCGC	ARLGGEDQWGDYLDR	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	229	13	0	94.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  E  K  G  L  E 
                    Query_11606  1    ACCCTGTCCCTCACCTGCACTGTGTCTAGTGGCTCCATCAGCAGTTACTACTGGAGTTGGATCCGGCAGTCCCCAGAGAAGGGACTGGAG  90
V  94.6% (229/242)  IGHV4-59*08  49   .......................C...G.............T..............C............C......G.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  E  N 
                    Query_11606  91   TGGATTGGATATATCAACTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCGAGAAC  180
V  94.6% (229/242)  IGHV4-59*08  139  ........G......T.T..................................................................A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  G  G  E  D  Q  W  G  D 
                    Query_11606  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCCTGTATTATTGTGCGAGGTTAGGGGGAGAGGACCAATGGGGGGAC  270
V  94.6% (229/242)  IGHV4-59*08  229  ...................G.........................G.......C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (10/11)    IGHD3-16*01  14   --------------------------------------------------------------...T.......-----------------  24
J  93.8% (45/48)    IGHJ4*02     1    ----------------------------------------------------------------------------------------..  2

                                      ----------->                                  
                                       Y  L  D  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11606  271  TACCTTGACCGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  93.8% (45/48)    IGHJ4*02     3    ...T.....TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_123764

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           352     3e-99
IGHD1-20*01                                                                                           29.5    2e-04
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-20*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGAAAA	TATAACTGGAACGAC	GGAAT	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATC	ARVGKYNWNDGIAFDI	263	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	49	47	37	10	0	78.7
CDR1-IMGT	50	73	24	22	2	0	91.7
FR2-IMGT	74	124	51	48	3	0	94.1
CDR2-IMGT	125	148	24	23	1	0	95.8
FR3-IMGT	149	262	114	109	5	0	95.6
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	267	246	21	0	92.1


Alignments

                                      <------------------FR1-IMGT-------------------><-------CDR1-IMGT------><------------------
                                         L  V  Q  S  G  A  E  V  K  V  S  C  K  A  S  G  G  T  F  N  S  F  A  V  N  W  V  R  Q  
                    Query_11607  3    AGCTGGTGCAGTCTGGAGCTGAGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAACAGCTTTGCTGTCAACTGGGTGCGACAGG  92
V  92.1% (246/267)  IGHV1-69*01  29   ..G..AA.A..C....GT.CTC......................................G.....A....A...G..............  118
                                         V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y  A  I  S  W  V  R  Q  

                                      --FR2-IMGT---------------------><-------CDR2-IMGT------><---------------------------------
                                      A  P  G  H  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  K  Y  A  Q  K  F  Q  G  R  V  T  
                    Query_11607  93   CCCCTGGACATGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAACAAAATACGCACAGAAGTTCCAGGGCAGAGTCACGA  182
V  92.1% (246/267)  IGHV1-69*01  119  ..........A..........................................G....C...............................  208
                                      A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q  K  F  Q  G  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  T  A  D  E  S  T  R  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A  V  Y  Y  C  A  R  V  
                    Query_11607  183  TTACCGCGGACGAATCCACGAGGACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCCGTTTATTATTGTGCGAGAGTAG  272
V  92.1% (246/267)  IGHV1-69*01  209  ......................C....C..........................................G.....C..........---  295
                                      I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A  V  Y  Y  C  A  R     

                                      ----------CDR3-IMGT------------------>                                  
                                      G  K  Y  N  W  N  D  G  I  A  F  D  I  W  G  Q  G  T  I  V  T  V  S  S  
                    Query_11607  273  GAAAATATAACTGGAACGACGGAATTGCCTTTGATATCTGGGGCCAAGGGACAATAGTCACCGTCTCTTCAG  344
D  100.0% (15/15)   IGHD1-20*01  3    -----...............----------------------------------------------------  17
J  95.7% (45/47)    IGHJ3*02     4    -------------------------...T..........................G................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_123763

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         283     1e-78
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	GGAGTCGTAATTAT	CATGGGAATTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGAGTCGTAATTATCATGGGAATTTCTACTTCGACCAC	ARGSRNYHGNFYFDH	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	44	7	0	86.3
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	104	10	0	91.2
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	215	34	0	86.3


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  I  D  S  V  Y  Y  S  L  N  W  I  R  Q  T  P  L  K  G  
                    Query_11608    4    CCCTGAGACTCTCCTGCGCTGTGTCTGGTGGCTCCATCGACAGTGTTTACTACTCCTTAAACTGGATCCGGCAGACACCACTGAAGGGCC  93
V  86.3% (215/249)  IGHV4-30-2*01  50   .....TCC...A..........C...............AG.....G.GGT.......GG.G.............C.....GG........  139
                                           L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Q  H  S  G  A  T  Y  Y  N  P  S  L  E  S  R  V  S  L  S  V  D  R  S  
                    Query_11608    94   TGGAGTGGATTGGCTACATCCAGCATTCTGGGGCCACCTACTACAACCCGTCCCTCGAGAGTCGGGTCTCCCTTTCAGTAGACCGGTCCA  183
V  86.3% (215/249)  IGHV4-30-2*01  140  .............G......T.T...AG....AG......................A.......A...A..A.A.........A......  229
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        K  S  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  R  N  Y  H  G  
                    Query_11608    184  AGAGCCAGTTCTCCCTGAGGCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGAGGGAGTCGTAATTATCATGGGA  273
V  86.3% (215/249)  IGHV4-30-2*01  230  ...A..............A.....G...........................G................---------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  85.7% (12/14)    IGHD3-3*01     15   ---------------------------------------------------------------------.....G..T.....-------  28

                                        ---------------->                                  
                                        N  F  Y  F  D  H  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_11608    274  ATTTCTACTTCGACCACTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTCAG  324
J  91.5% (43/47)    IGHJ4*02       2    ----......T...T...............C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_123760

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           310     1e-86
IGHD5-12*01                                                                                           12.2    32   
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGATGCGTAGAGA	TGGCTTCGA	AAACCAATATGGGAGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATGCGTAGAGATGGCTTCGAAAACCAATATGGGAGATTTGACTAC	ARMRRDGFENQYGRFDY	237	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	236	114	97	11	6	85.1
CDR3-IMGT (germline)	237	240	4	4	0	0	100
Total	N/A	N/A	246	224	16	6	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11609  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  91.1% (224/246)  IGHV3-23*01  47   .........................................................................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  G  I  S  G  T  G  G  T  I  F  Y  A  G  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11609  91   AGTGGGTCTCAGGTATTAGTGGTACTGGTGGTACCATATTTTATGCGGGCTCCGTGAAGGGACGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.1% (224/246)  IGHV3-23*01  137  ............C...........G........G..C..AC..C..A.A............C............................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      N        L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  M  R  R  D  G  F  E  
                    Query_11609  181  A------CTTGTATCTGCAAATGAATAGCCTGAGAGCCGACGACACGGCCGTCTATTACTGTGCGAGGATGCGTAGAGATGGCTTCGAAA  264
V  91.1% (224/246)  IGHV3-23*01  227  .GAACACGC................C..............G...........A.............------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  88.9% (8/9)      IGHD5-12*01  11   -------------------------------------------------------------------------------.....A...--  19

                                      GT-------------------->                                  
                                      N  Q  Y  G  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11609  265  ACCAATATGGGAGATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_123761

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           399     3e-113
IGHD7-27*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGTCCTTTTA	CTAACTGGGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGTCCTTTTACTAACTGGGGTTGACTTT	AVLLLTGVDF	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	270	15	0	94.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  N  Y
                    Query_11610  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACAGCTTTACCAACTA  90
V  94.7% (270/285)  IGHV5-51*03  6    .............................................................A........................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  G  W  V  R  Q  R  P  G  E  G  L  E  W  M  G  L  I  Y  P  G  D  S  D  T  R  Y  N  S
                    Query_11610  91   CTTCATCGGCTGGGTGCGCCAGAGGCCCGGGGAAGGCCTGGAGTGGATGGGGCTCATTTATCCTGGTGACTCTGATACCAGGTACAACTC  180
V  94.7% (270/285)  IGHV5-51*03  96   ..GG...................T.......A....................A....C.......................A....G.C.  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11610  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.7% (270/285)  IGHV5-51*03  186  ...............G............................G..........C..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        I  Y  Y  C  A  V  L  L  L  T  G  V  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11610  271  CATTTATTACTGTGCAGTCCTTTTACTAACTGGGGTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  347
V  94.7% (270/285)  IGHV5-51*03  276  ...G...........--------------------------------------------------------------  290
                                        M  Y  Y  C  A                                                              
D  100.0% (10/10)   IGHD7-27*01  1    -------------------------..........------------------------------------------  10
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_123768

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACATG	ATTACCATGAT	TCCA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAACATGATTACCATGATTCCAGATGCTTTTGATATC	ARDNMITMIPDAFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  S  S  I  N  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  A 
                    Query_11611  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTAGCTCCATCAACAGTGGAGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGCC  90
V  94.4% (237/251)  IGHV4-31*03  49   ..............................G.........G......T........................................G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  D  S  G  G  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_11611  91   CTGGAGTGGATTGGATACATCTATGACAGTGGGGGCACCTCCTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCACTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ..............G.........T........A......A...........................T.........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  D  N  M  I  T  M  I 
                    Query_11611  181  AGGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACTGTCGCGGACACGGCCGTATATTACTGTGCGAGAGATAACATGATTACCATGATT  270
V  94.4% (237/251)  IGHV4-31*03  229  .A...................C...............C...............G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD3-22*01  3    ------------------------------------------------------------------------------.....T.....-  13

                                      ----------------->                                  
                                       P  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11611  271  CCAGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  100.0% (49/49)   IGHJ3*02     2    ---.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_123769

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         369     2e-104
IGHD2-8*01                                                                                            14.1    8.2   
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CTAATGG	CCCGACTGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGGCCCGACTGAACTACGGCATGGACGTC	ARLMARLNYGMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	241	5	0	98


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_11612    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCATCAGCAGTGGTTACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  98.0% (241/246)  IGHV4-38-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  H  S  G  S  T  H  Y  T  P  S  L  K  S  R  V  T  I  S  V  D  A  S  K 
                    Query_11612    91   GAGTGGATTGGGAGTATCTATCATAGTGGGAGCACACACTACACCCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACGCGTCCAAG  180
V  98.0% (241/246)  IGHV4-38-2*01  139  ...................................CT......A.....................................A........  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                         N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  A  R  L  N  Y  G 
                    Query_11612    181  AACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACTAATGGCCCGACTGAACTACGGC  270
V  98.0% (241/246)  IGHV4-38-2*01  229  ......................G...........................................------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD2-8*01     12   ------------------------------------------------------------------.......-----------------  18
J  94.0% (47/50)    IGHJ6*02       13   ----------------------------------------------------------------------------------.......T  20

                                        -------->                                 
                                         M  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_11612    271  ATGGACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCGTCA  312
J  94.0% (47/50)    IGHJ6*02       21   ................A.....................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_99606

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-9*01                                                                                            14.1    8.3  
IGHJ2*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTACGC	TTTTGAC	GGCAC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTACGCTTTTGACGGCACCTGGTGCTTCGATCAC	AREYAFDGTWCFDH	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  A  M  S  W  V  R  Q  A  T  G  K  G  L  
                    Query_11613  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGCCATGAGCTGGGTCCGTCAGGCTACAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ...............................................T...................C......C...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  T  T  G  G  S  T  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_11613  91   AGTGGGTTTCAGCTATTACTACTACTGGTGGTAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  .......C..........G.GG..G.............T................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  M  E  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  Y  A  F  D  G  T  
                    Query_11613  181  AGAACACGTTGTCTATGGAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAGAGAGTACGCTTTTGACGGCACCT  270
V  93.6% (234/250)  IGHV3-23*01  227  ........C...A.C..C......................G.........................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-9*01   12   ----------------------------------------------------------------------------.......-------  18
J  92.0% (46/50)    IGHJ2*01     4    ----------------------------------------------------------------------------------------..  5

                                      ------------->                                  
                                      W  C  F  D  H  W  C  R  G  T  L  V  A  V  S  S  
                    Query_11613  271  GGTGCTTCGATCACTGGTGCCGTGGCACCCTGGTCGCTGTCTCCTCAG  318
J  92.0% (46/50)    IGHJ2*01     6    ...A........T....G.................A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_99607

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           330     1e-92
IGHD1-1*01                                                                                            14.1    8.4  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGGCCTT	TGGAACG	GGGGACTACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGGCCTTTGGAACGGGGGACTACCACTTTGACTAC	ARAPAFGTGDYHFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  I  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_11614  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCATCTTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-11*01  47   .....................C..............C.....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  G  S  G  S  R  I  H  Y  A  D  P  V  K  G  R  F  T  I  S  R  G  N  A  
                    Query_11614  91   AGTGGCTTTCATACATTAGTGGTAGTGGTTCTAGGATCCACTACGCAGACCCTGTGAAGGGCCGATTCACCATCTCCAGGGGCAACGCCG  180
V  92.4% (230/249)  IGHV3-11*01  137  .....G..............A........AG..CC..AT...........T..............................A.......A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  F  C  A  R  A  P  A  F  G  T  G  
                    Query_11614  181  AGAACTCCCTATATCTGCAAATGAATAGCCTGAGAGCCGAGGACACGGCCATTTATTTCTGTGCGAGAGCCCCGGCCTTTGGAACGGGGG  270
V  92.4% (230/249)  IGHV3-11*01  227  .......A..G..............C........................G.G....A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-1*01   9    -------------------------------------------------------------------------------.......----  15

                                      ---------------->                                  
                                      D  Y  H  F  D  Y  W  G  Q  G  A  P  V  T  V  S  S  
                    Query_11614  271  ACTACCACTTTGACTACTGGGGCCAGGGAGCCCCGGTCACCGTCTCCTCAG  321
J  95.6% (43/45)    IGHJ4*02     4    ------.......................A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_99604

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           330     1e-92
IGHD3-16*01                                                                                           12.2    32   
IGHJ2*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGCCG	TGGGGG	CATCAAGGGTTC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGCCGTGGGGGCATCAAGGGTTCCTGGTACTCCGATCTC	ARVRRGGIKGSWYSDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11615  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGACATGAGATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-48*03  47   ..............................................TT....A.....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  T  G  S  T  L  I  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11615  91   AGTGGGTTTCACACATTAGTACTGGTAGTACTCTTATACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  92.4% (230/249)  IGHV3-48*03  137  ...........T.........G.A..G...G.ACC...T..................................................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  V  R  R  G  G  I  K  
                    Query_11615  181  AGAATTCTCTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGCGCGAGAGTCCGCCGTGGGGGCATCAAGG  270
V  92.4% (230/249)  IGHV3-48*03  227  ....C..A........G.................................G..........T.......---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------------......--------  22

                                      T------------------>                                  
                                      G  S  W  Y  S  D  L  W  G  R  G  P  L  V  P  V  S  P  
                    Query_11615  271  GTTCCTGGTACTCCGATCTCTGGGGCCGTGGCCCCCTGGTCCCTGTCTCCCCAG  324
J  92.0% (46/50)    IGHJ2*01     4    ----........T...................A........A........T...  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_122414

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_11616  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_11616  91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_11616  181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11616  271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_99602

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11617  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11617  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_11617  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11617  271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_99603

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           322     2e-90
IGHD3-10*01                                                                                           14.1    8.7  
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCCGAGGGGCTGGG	ACTATGG	GTTACT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCCGAGGGGCTGGGACTATGGGTTACTCTACTACTACGGTATGGACGTC	ARPPRGWDYGLLYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  D  F  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11618  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAACTATGACTTCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.5% (227/248)  IGHV3-30*03  47   .............................................G.....G.A.G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  A  A  L  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  L  K  G  R  I  I  I  S  R  D  N  S  
                    Query_11618  91   AGTGGGCGGCACTTATTTCATATGATGGAAGTAACAAATATTATGCAGACTCCCTGAAGGGCCGAATCATCATCTCCAGAGACAATTCCA  180
V  91.5% (227/248)  IGHV3-30*03  137  ......T....G....A.................T.....C............G...........T...C....................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      R  N  T  L  Y  L  Q  L  D  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  P  P  R  G  W  D  Y  
                    Query_11618  181  GGAATACGTTGTACCTGCAATTGGACAGCCTGAGACCTGAGGACACGGCGGTATATTACTGTGCGAGACCTCCGAGGGGCTGGGACTATG  270
V  91.5% (227/248)  IGHV3-30*03  227  A...C...C....T......A..A...........G.............T..G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-10*01  6    ------------------------------------------------------------------------------------......  11

                                      -IMGT----------------------->                              
                                      G  L  L  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_11618  271  GGTTACTCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  329
D  100.0% (7/7)     IGHD3-10*01  12   .----------------------------------------------------------  12
J  100.0% (52/52)   IGHJ6*02     8    -------....................................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_99600

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           325     3e-91
IGHD3-10*01                                                                                           12.2    33   
IGHJ2*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGA	CGGGGA	TTGGAAG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGACGGGGATTGGAAGTTCGATCTC	ARHDGDWKFDL	267	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	25	5	0	83.3
FR2-IMGT	81	131	51	47	4	0	92.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	97	17	0	85.1
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	241	33	0	88


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  D  S  I  I  S  S  R  F  F  W  G  W  
                    Query_11619  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCATCAGTAGTCGTTTCTTCTGGGGCTGGC  90
V  88.0% (241/274)  IGHV4-39*01  26   ................T.....................................G........G.......A...A..A..........A  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      L  R  Q  P  P  K  K  G  L  E  W  I  G  T  I  H  D  S  G  N  R  W  S  N  P  T  L  K  S  R  
                    Query_11619  91   TCCGCCAGCCCCCAAAGAAGGGGCTGGAGTGGATTGGGACTATCCATGACAGTGGGAACAGATGGTCCAACCCGACCCTCAAGAGTCGAC  180
V  88.0% (241/274)  IGHV4-39*01  116  ..............GG.......................G....T..T.T.......G..CC.AC.A.......T..............G  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      L  T  I  S  V  G  T  S  M  N  Q  F  S  L  T  I  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  
                    Query_11619  181  TCACCATATCGGTGGGCACGTCCATGAACCAGTTCTCCCTGACGATTTCCTCTATGACCGCCGCTGACACGGCTGTCTATTACTGTGCGA  270
V  88.0% (241/274)  IGHV4-39*01  206  ..........C..A.A........A.................A.C.GAG....G..........A...........G.............  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      --------CDR3-IMGT----------->                                  
                                      R  H  D  G  D  W  K  F  D  L  W  G  R  G  S  Q  V  T  V  S  S  
                    Query_11619  271  GACATGACGGGGATTGGAAGTTCGATCTCTGGGGCCGTGGCTCCCAGGTCACTGTCTCCTCAG  333
V  88.0% (241/274)  IGHV4-39*01  296  ....-----------------------------------------------------------  299
                                      R                                                              
D  100.0% (6/6)     IGHD3-10*01  15   -------......--------------------------------------------------  20
J  95.3% (41/43)    IGHJ2*01     11   --------------------.....................A...T.................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_99601

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           327     9e-92
IGHD6-6*01                                                                                            10.3    119  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACCCCC	GCTCG	CTTTGCA	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACCCCCGCTCGCTTTGCAGACTTC	ATTPARFADF	252	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	31	38	8	8	0	0	100
CDR1-IMGT	39	62	24	23	1	0	95.8
FR2-IMGT	63	113	51	50	1	0	98
CDR2-IMGT	114	137	24	20	4	0	83.3
FR3-IMGT	138	251	114	112	2	0	98.2
CDR3-IMGT (germline)	252	255	4	4	0	0	100
Total	N/A	N/A	225	217	8	0	96.4


Alignments

                                      <FR1-IM><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><------
                                         A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  I  S  Y  I  S  
                    Query_11620  31   CAGCCTCTGGATTCACCTTCAGTGACTATTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGATTTCATACATCAGTC  120
V  96.4% (217/225)  IGHV3-11*01  68   ............................C.............................................G..........T...A  157
                                         A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  S  

                                      -CDR2-IMGT------><----------------------------------------------------FR3-IMGT------------
                                      L  S  G  R  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  
                    Query_11620  121  TTAGTGGTAGGACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAGA  210
V  96.4% (217/225)  IGHV3-11*01  158  G.........T.............................................................................A.  247
                                      S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  

                                      ----------------------------------------><----------CDR3-IMGT--------->                   
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  T  P  A  R  F  A  D  F  W  G  Q  G  T  L  
                    Query_11620  211  TGAACAGCCTGAGAGCCGAAGACACGGCCGTGTATTACTGTGCGACGACCCCCGCTCGCTTTGCAGACTTCTGGGGCCAGGGAACCCTGG  300
V  96.4% (217/225)  IGHV3-11*01  248  ...................G.........................---------------------------------------------  292
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                               
D  100.0% (5/5)     IGHD6-6*01   11   -----------------------------------------------------.....--------------------------------  15
J  97.5% (39/40)    IGHJ4*02     9    -----------------------------------------------------------------....A....................  33

                                                     
                                      V  T  V  S  S  
                    Query_11620  301  TCACCGTCTCCTCAG  315
J  97.5% (39/40)    IGHJ4*02     34   ...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_54470

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           282     3e-78
IGHD2-2*03                                                                                            14.1    8.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-2*03	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TGGGGAATA	TGGAAATTGT	TA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGTGGGGAATATGGAAATTGTTAACTACTTTGACGCC	VRVGNMEIVNYFDA	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	11	1	0	91.7
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	51	0	0	100
CDR2-IMGT	102	125	24	16	8	0	66.7
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	232	206	26	0	88.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I 
                    Query_11621  15   TGTGCAGCCTCAGGATTCACATTCAGTAGTTATTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGTATT  104
V  88.8% (206/232)  IGHV3-74*01  64   ...........T........C........C..C.........................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  T  D  G  T  S  F  S  H  A  D  A  V  R  G  R  F  T  I  S  R  D  N  A  K  N  T  L  F  L 
                    Query_11621  105  AGCACTGATGGGACTAGTTTCAGCCACGCGGACGCCGTGAGGGGCCGATTCACCATTTCCAGAGACAATGCCAAGAACACCCTCTTTTTG  194
V  88.8% (206/232)  IGHV3-74*01  154  .AT.G........G...CACA...T........T......A...............C...........C...........G..G.A.C..  243
                                       N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 

                                      --------------------------------------------><----------------CDR3-IMGT--------------->   
                                       Q  M  D  N  L  R  A  E  D  T  A  V  Y  Y  C  V  R  V  G  N  M  E  I  V  N  Y  F  D  A  W 
                    Query_11621  195  CAAATGGACAATTTGAGAGCCGAGGACACGGCTGTGTATTACTGCGTAAGAGTGGGGAATATGGAAATTGTTAACTACTTTGACGCCTGG  284
V  88.8% (206/232)  IGHV3-74*01  244  ......A...G.C...............................T.C.....--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  90.0% (9/10)     IGHD2-2*03   1    -------------------------------------------------------------....T.....-------------------  10
J  93.8% (45/48)    IGHJ4*02     1    -------------------------------------------------------------------------...........TA....  17

                                                                     
                                       G  Q  G  N  L  V  T  V  S  S  
                    Query_11621  285  GGCCAGGGAAACCTGGTCACCGTCTCCTCAG  315
J  93.8% (45/48)    IGHJ4*02     18   ..........C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_99608

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           310     1e-86
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCATCCTTCC	GACTG	T	GGTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATCCTTCCGACTGTGGTTTGGGCGTC	AKDHPSDCGLGV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  D  F  G  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11622  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCAACTTCAGCGACTTTGGCTTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGC  90
V  89.6% (224/250)  IGHV3-30*18  47   ...............................A....C......TAG..A....A...................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      H  W  L  A  V  I  S  Y  D  G  S  I  R  H  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11622  91   ACTGGCTGGCAGTTATATCATATGATGGATCTATTAGACACTATGCAAACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  89.6% (224/250)  IGHV3-30*18  137  .G...G.......................AG..A..A.T........G..........................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  L  K  G  L  T  T  E  D  T  A  M  Y  Y  C  A  K  D  H  P  S  D  C  G  
                    Query_11622  181  AGAACACGTTGTATCTTCAATTGAAGGGACTTACAACTGAGGACACGGCTATGTATTACTGTGCGAAAGATCATCCTTCCGACTGTGGTT  270
V  89.6% (224/250)  IGHV3-30*18  227  ........C.......G...A....CA.C..G.G.G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD2-21*02  17   --------------------------------------------------------------------------------.....-----  21
J  90.9% (40/44)    IGHJ6*02     18   --------------------------------------------------------------------------------------...A  21

                                      ------->                                
                                      L  G  V  W  G  Q  G  T  T  V  I  V  S  S
                    Query_11622  271  TGGGCGTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTC  310
J  90.9% (40/44)    IGHJ6*02     22   ...A............A.............C.........  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_198588

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            346     2e-97
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGGGAG	GCAGTGGC	CCCTGGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGGGAGGCAGTGGCCCCTGGGAC	ARAPGGSGPWD	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	46	5	0	90.2
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  T  S  N  L  W  T  W  F  S  Q  P  P  E  K  G  L 
                    Query_11623  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGTACTAGTAACTTGTGGACTTGGTTCAGCCAGCCCCCAGAAAAGGGGCTG  90
V  94.7% (234/247)  IGHV4-4*02   49   .........................................C.G........G.....G....G..C............GG.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  K  S  K 
                    Query_11623  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCTTCCCTCAAGAGTCGAGTCACCATATCAATAGACAAGTCCAAG  180
V  94.7% (234/247)  IGHV4-4*02   139  ...............................................G...........................G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  A  P  G  G  S  G  P  W 
                    Query_11623  181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCATCTATTACTGTGCGAGAGCCCCGGGAGGCAGTGGCCCCTGG  270
V  94.7% (234/247)  IGHV4-4*02   229  ...................................C............G.G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD6-19*01  8    ----------------------------------------------------------------------------........------  15

                                      -->                                  
                                       D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11623  271  GACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (36/36)   IGHJ4*02     13   -....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_24526

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           378     3e-107
IGHD6-13*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	GGGTATAGCAGCAGC	GGAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTATAGCAGCAGCGGATTTTGACTAC	ARGGIAAADFDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	243	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11624  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.6% (243/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_11624  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  99.6% (243/244)  IGHV4-59*01  139  ........................................................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  I  A  A  A  D  F  D 
                    Query_11624  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGGGTATAGCAGCAGCGGATTTTGAC  270
V  99.6% (243/244)  IGHV4-59*01  229  ................................................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (15/15)   IGHD6-13*01  1    -----------------------------------------------------------------...............----------  15
J  100.0% (43/43)   IGHJ4*02     6    ------------------------------------------------------------------------------------......  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11624  271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (43/43)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_24525

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           357     1e-100
IGHD6-13*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGA	GGGTATAG	AAAGGTTG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGAGGGTATAGAAAGGTTGACGGTATGGACGCC	AREGGYRKVDGMDA	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11625  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACTAATTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-48*03  47   ..........................................G..G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  S  S  R  G  S  I  M  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11625  91   AGTGGGTTTCATTCATTAGTAGTCGTGGTAGTATCATGTACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (239/250)  IGHV3-48*03  137  ............A..........A.........C...A....................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  G  G  Y  R  K  V  
                    Query_11625  181  GGAACTCACTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGCGAGAGAGGGAGGGTATAGAAAGGTTG  270
V  95.6% (239/250)  IGHV3-48*03  227  A...........A......A..............................G...................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-13*01  1    --------------------------------------------------------------------------........--------  8

                                      ------------->                                 
                                      D  G  M  D  A  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_11625  271  ACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCACCGTCTCCTCA  317
J  95.7% (45/47)    IGHJ6*02     16   ............T................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_24524

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           322     2e-90
IGHD2-15*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCCGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCCGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_11626  1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_11626  91   CTAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-61*08  139  ..G..................T..T................C.................G.......TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N 
                    Query_11626  181  AGGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGCAATTTGTATTGCCGGTAAC  270
V  91.2% (228/250)  IGHV4-61*08  229  .A.................A.....GC..........................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  81.8% (18/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G..GT....G.  22

                                      3-IMGT----------------------->                                  
                                       C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11626  271  TGCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  81.8% (18/22)    IGHD2-15*01  23   ......----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_24523

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           294     6e-82
IGHD3-9*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGACCCA	TACGGTATTTTG	GCTATTGAGAAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGTGACCCATACGGTATTTTGGCTATTGAGAAG	ATGDPYGILAIEK	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	42	9	0	82.4
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  N  Y  W  S  W  I  R  Q  S  P  A  K  G 
                    Query_11627  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGCCAACTACTGGAGTTGGATCCGCCAATCCCCTGCAAAGGGC  90
V  87.6% (219/250)  IGHV4-31*03  49   .................................................GTT..........C...........GCA...A.GG......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  T  T  E  Y  N  P  S  L  K  S  R  L  T  M  S  I  D  P  S 
                    Query_11627  91   CTCGAGTGGATTGGATACATCTATTATGGTGGGACCACCGAGTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCCATTGACCCGTCT  180
V  87.6% (219/250)  IGHV4-31*03  139  ..G...........G...........CA......G....T.C...........C............G.T.....A..AG.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       T  N  Q  F  S  P  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  D  P  Y  G  I  L 
                    Query_11627  181  ACGAACCAGTTCTCCCCGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGTGACCCATACGGTATTTTG  270
V  87.6% (219/250)  IGHV4-31*03  229  .A..............T....C...G...........................G.............G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD3-9*01   5    ------------------------------------------------------------------------------....A.......  16

                                      ----------->                                
                                       A  I  E  K  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11627  271  GCTATTGAGAAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
J  100.0% (32/32)   IGHJ4*02     15   ------------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_24522

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD4-17*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCACTACAACGTT	TACGGTGACTAC	GGCGT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCACTACAACGTTTACGGTGACTACGGCGTTGATGCTTTTGATATC	ARDHYNVYGDYGVDAFDI	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  T  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11628  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCACCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   .................................T........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  A  K  N 
                    Query_11628  91   TGGGTTGGGTATATCTATTACAGAGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGGCCAAGAAT  180
V  96.7% (237/245)  IGHV4-59*01  139  ...A...................T....G....................................................T.......C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  H  Y  N  V  Y  G  D  Y 
                    Query_11628  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTACTACTGTGCGAGAGATCACTACAACGTTTACGGTGACTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...................G..............................T..............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  5    ------------------------------------------------------------------------------............  16

                                      -------------------->                                  
                                       G  V  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11628  271  GGCGTTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  325
J  100.0% (50/50)   IGHJ3*02     1    -----..................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_24520

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTG	TACAGTTATGGTT	TCCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGTACAGTTATGGTTTCCAATACTACTTTGACTCC	ARLYSYGFQYYFDS	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  I  Y  D  Y  F  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_11629  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTATTTATGATTACTTCTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  92.0% (229/249)  IGHV4-39*01  49   ......................................C..C.G.AG.AG.....A.....G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  V  Y  Y  A  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11629  91   CTGGAGTGGATTGGGAGTGTCTATTATGCTGGGAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCCGTAGACACGTCC  180
V  92.0% (229/249)  IGHV4-39*01  139  ..................A........AG.....G.................................C.....................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       E  N  Q  F  S  L  K  M  R  S  A  T  A  A  D  T  A  V  Y  F  C  A  R  L  Y  S  Y  G  F  Q 
                    Query_11629  181  GAGAACCAGTTCTCCCTGAAAATGAGGTCTGCGACCGCCGCAGACACGGCTGTGTATTTCTGTGCGAGATTGTACAGTTATGGTTTCCAA  270
V  92.0% (229/249)  IGHV4-39*01  229  A...................GC....C....T..........................A..........---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD5-18*01  6    ------------------------------------------------------------------------.....C.......-----  18

                                      -------------->                                  
                                       Y  Y  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11629  271  TACTACTTTGACTCCTGGGGCCAGGGAGCCCTAGTCACCGTCTCCTCAG  319
J  93.8% (45/48)    IGHJ4*02     1    -............A.............A....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_198582

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         319     2e-89
IGHD2-2*01                                                                                            35.3    4e-06
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGGGGAG	TATTGTAGTAGTACCAACTGC	ATG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGGGGAGTATTGTAGTAGTACCAACTGCATGTACGGTCTGGACGTC	ARGGEYCSSTNCMYGLDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  D  I  Y  S  W  N  W  I  R  Q  P  P  G  M  G 
                    Query_11630    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCTCCAGTGATATTTACTCCTGGAACTGGATCCGGCAGCCACCAGGGATGGGC  90
V  91.1% (226/248)  IGHV4-30-2*01  49   .......................................AG.....G.GG...........G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  V  G  H  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  Q  S  R  V  T  I  S  A  D  R  S 
                    Query_11630    91   CTGGAGTGGGTTGGCCACATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCCAGAGTCGAGTCACCATCTCAGCTGACAGGTCC  180
V  91.1% (226/248)  IGHV4-30-2*01  139  .........A....GT..................G......................A................A....TA.........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  K  H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  E  Y  C  S  S 
                    Query_11630    181  AAGAAACACTTCTCGTTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGGGGGGGGGAGTATTGTAGTAGT  270
V  91.1% (226/248)  IGHV4-30-2*01  229  .....C..G.....CC...A.....G...........................G..............----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  95.2% (20/21)    IGHD2-2*01     5    ------------------------------------------------------------------------------............  16

                                        -IMGT--------------------->                                 
                                         T  N  C  M  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11630    271  ACCAACTGCATGTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
D  95.2% (20/21)    IGHD2-2*01     17   ....G....---------------------------------------------------  25
J  97.9% (47/48)    IGHJ6*02       15   ------------......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_198583

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           308     4e-86
IGHD3-10*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	GACCAAGG	GGTTCGGGGACTTA	CTGCAGCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGACCAAGGGGTTCGGGGACTTACTGCAGCCCTTTGACCAC	VRTKGFGDLLQPFDH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	222	25	0	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  T  S  G  F  T  L  S  S  S  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11631  1    GGTCCCTGAGACTCTCCTGTGAAACCTCTGGATTCACCTTGAGTAGTTCCACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.9% (222/247)  IGHV3-21*01  47   .....................C.G................C.....C.AT.G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  T  S  G  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11631  91   AGTGGGTCGCATCTATTACTAGTGGAAGCACTTACATCTACTACGCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAACGCCA  180
V  89.9% (222/247)  IGHV3-21*01  137  ........T....C....G....A.T..T.G......A........................C...........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  L  S  G  L  R  V  E  D  T  A  V  Y  S  C  V  R  T  K  G  F  G  D  L  
                    Query_11631  181  AGAACTCACTGTTTCTGCAACTGAGTGGCCTGAGAGTCGAGGACACGGCTGTCTATTCCTGTGTGAGGACCAAGGGGTTCGGGGACTTAC  270
V  89.9% (222/247)  IGHV3-21*01  227  ............A.......A...ACA.........C...............G....A.....C...-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD3-10*01  11   ---------------------------------------------------------------------------..........G...-  24

                                      ---------------->                                  
                                      L  Q  P  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11631  271  TGCAGCCCTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.7% (43/44)    IGHJ4*02     5    -------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_198585

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD3-10*01                                                                                           23.8    0.010 
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGGCCCC	ARSGSGNYEGWLGP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	235	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11632  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (235/242)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  F  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11632  91   TGGATTGGCTTTATCTATTACACTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGTGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.1% (235/242)  IGHV4-59*01  139  ........G.A...........G......C.............................A..............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_11632  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  97.1% (235/242)  IGHV4-59*01  229  ................................T..............G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  95.7% (45/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  G  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11632  271  CTCGGCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  95.7% (45/47)    IGHJ5*02     9    T...A......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_24529

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           416     2e-118
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	294	280	14	0	95.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T 
                    Query_11633  1    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACC  90
V  95.2% (280/294)  IGHV5-51*03  1    .....G........G...................................................................G.......  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y 
                    Query_11633  91   AGCTACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATAC  180
V  95.2% (280/294)  IGHV5-51*03  91   .............G.......................A...................................A....G.....A.....  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D 
                    Query_11633  181  AGCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGAC  270
V  95.2% (280/294)  IGHV5-51*03  181  ..................................................C...........G...............A.....T.....  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V 
                    Query_11633  271  ACCGCCGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTC  360
V  95.2% (280/294)  IGHV5-51*03  271  ......A.G...............------------------------------------------------------------------  294
                                       T  A  M  Y  Y  C  A  R                                                                   
D  100.0% (12/12)   IGHD6-19*01  5    ---------------------------............---------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------.........................................  41

                                             
                                       S  S  
                    Query_11633  361  TCCTCAG  367
J  100.0% (48/48)   IGHJ4*02     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_24528

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            251     8e-69
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GAATGAACCCTGAATT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATGAACCCTGAATTC	ARGMNPEF	239	262	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	19	5	0	79.2
FR2-IMGT	50	100	51	40	11	0	78.4
CDR2-IMGT	101	124	24	20	4	0	83.3
FR3-IMGT	125	238	114	98	16	0	86
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	232	196	36	0	84.5


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  I  F  R  G  H  W  M  T  W  I  R  H  L  P  D  K  G  L  Q  W  V  A  N  I 
                    Query_11634  14   TGTGCAGCCTCTGGATTCATCTTTCGTGGCCACTGGATGACTTGGATTCGCCACCTTCCAGATAAGGGGCTGCAGTGGGTGGCCAATATA  103
V  84.5% (196/232)  IGHV3-7*01   64   ...................C....A..A..T.T.......GC...G.C.....GGC.....GG.........G.............C...  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       K  E  D  G  S  E  E  H  Y  G  D  S  V  R  G  R  F  T  I  S  R  D  N  A  Q  S  S  L  F  L 
                    Query_11634  104  AAGGAAGATGGAAGTGAAGAGCACTATGGTGACTCTGTGAGGGGCCGATTCACCATCTCCCGAGACAACGCCCAGAGCTCTCTGTTTTTG  193
V  84.5% (196/232)  IGHV3-7*01   154  ...C.............GA.AT......TG..........A...................A...........A...A...A....A.C..  243
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------CDR3-IMGT------>                     
                                       Q  M  N  N  L  R  V  E  D  T  A  I  Y  Y  C  A  R  G  M  N  P  E  F  W  G  Q  G  T  L  V 
                    Query_11634  194  CAGATGAACAACCTGAGAGTCGAAGACACGGCTATATATTACTGTGCGAGAGGAATGAACCCTGAATTCTGGGGCCAGGGAACCCTGGTC  283
V  84.5% (196/232)  IGHV3-7*01   244  ..A.......G........C...G.........G.G................--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
J  96.7% (29/30)    IGHJ4*02     14   --------------------------------------------------------------------......................  35

                                              
                                       I  V  S
                    Query_11634  284  ATCGTCTC  291
J  96.7% (29/30)    IGHJ4*02     36   .C......  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_264399

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           403     1e-114
IGHD4-17*01                                                                                           18.0    0.67  
IGHJ6*01                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAG	CTACGGTGA	GTCCGAGTACTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTC	ARDLATVSPSTFYYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  S  S  G  Y  T  F  T  S  Y 
                    Query_11635  2    CAGCTGGTGCAGTCTGGAGCGGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGTCTTCTGGTTACACCTTTACCAGTTAC  91
V  94.5% (274/290)  IGHV1-18*04  7    ....................T..........................................G......................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_11635  92   GGTATCACTTGGGTGCGGCAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  181
V  94.5% (274/290)  IGHV1-18*04  97   .......GC........A..............A................................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  S  D  D  T  A 
                    Query_11635  182  ATGGTCCGGGACAGAGTCACCATGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.5% (274/290)  IGHV1-18*04  187  .A.C...A..G.................C....................C..........C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  T  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_11635  272  GTGTATTACTGTGCGAGAGATTTAGCTACGGTGAGTCCGAGTACTTTCTACTACGGTATGGACGTCTGGGGTCAAGGGACCACGGTCACC  361
V  94.5% (274/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------.........--------------------------------------------------------  12
J  98.1% (52/53)    IGHJ6*01     11   -----------------------------------------------........................G..................  53

                                                
                                       V  S  S  
                    Query_11635  362  GTCTCCTCAG  371
J  98.1% (52/53)    IGHJ6*01     54   ..........  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_264398

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            329     3e-92
IGHD3-3*01                                                                                            37.2    1e-06
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGCGACGTCCGGGTCC	TACGATTTTTGGAGTGGTT	CTGGTACTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGCGACGTCCGGGTCCTACGATTTTTGGAGTGGTTCTGGTACTCTTGACTAC	AREATSGSYDFWSGSGTLDY	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  T  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11636  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTAGTGGTACCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  90
V  92.3% (229/248)  IGHV4-4*02   49   ..................G...................C..C...A...A..............................G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  H  S  G  S  T  K  Y  N  T  S  L  R  S  R  V  T  I  S  V  D  R  S  N 
                    Query_11636  91   GAGTGGATTGGAGAAATCTCTCATAGTGGGAGCACCAAGTACAACACGTCCCTCAGGAGTCGAGTCACCATATCAGTAGACAGGTCGAAC  180
V  92.3% (229/248)  IGHV4-4*02   139  ...........G.......A..................C......C.........A..........................A...C..G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------------CDR3
                                       K  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  T  S  G  S  Y  D 
                    Query_11636  181  AAGCAGTTCTCCCTGAGATTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGAGGCGACGTCCGGGTCCTACGAT  270
V  92.3% (229/248)  IGHV4-4*02   229  ..C.............AGC...G.............................................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (19/19)   IGHD3-3*01   5    ------------------------------------------------------------------------------------......  10

                                      -IMGT------------------------>                                  
                                       F  W  S  G  S  G  T  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_11636  271  TTTTGGAGTGGTTCTGGTACTCTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  334
D  100.0% (19/19)   IGHD3-3*01   11   .............---------------------------------------------------  23
J  97.6% (41/42)    IGHJ4*02     7    ----------------------.....................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_264396

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            341     5e-96
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCCACCCGAAAA	TATGACAGTAGTGATTATT	CCTCCCCCCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCACCCGAAAATATGACAGTAGTGATTATTCCTCCCCCCTCTTTGACTAC	STRKYDSSDYSSPLFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	108	6	0	94.7
Total	N/A	N/A	240	229	11	0	95.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  T  N  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_11637  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTACTAACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  95.4% (229/240)  IGHV4-4*02   49   ..............................................G...........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  R  G  G  S  P  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  K 
                    Query_11637  91   GAGTGGATTGGGGAAATCTATCGTGGTGGGAGCCCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCACTAGACAAGTCCAAA  180
V  95.4% (229/240)  IGHV4-4*02   139  ......................A.A........A.....................................A...G.............G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  S  T  R  K  Y  D  S  S  D  Y 
                    Query_11637  181  AACCAGTTCTCCCTGCGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTTCCACCCGAAAATATGACAGTAGTGATTAT  270
V  95.4% (229/240)  IGHV4-4*02   229  ...............AA.....G.....................................------------------------------  288
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  89.5% (17/19)    IGHD3-22*01  8    ------------------------------------------------------------------------.....T.......G....  25

                                      -------------------->                                  
                                       S  S  P  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11637  271  TCCTCCCCCCTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  89.5% (17/19)    IGHD3-22*01  26   .------------------------------------------------------  26
J  100.0% (44/44)   IGHJ4*02     5    -----------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_264395

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           360     1e-101
IGHD1-26*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTACAAAC	TGGGAGCCACT	CGAGGTCCGTG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATTACAAACTGGGAGCCACTCGAGGTCCGTGTGACTCC	AKDYKLGATRGPCDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11638  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-30*18  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  N  N  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11638  91   AGTGGGTGGCAGTTATTTCATATGATGGAAATAATAAATACTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCG  180
V  96.0% (240/250)  IGHV3-30*18  137  ................A.............G..............C...........................................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  S  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  Y  K  L  G  A  T  
                    Query_11638  181  AGAGTACCCTGTATCTGCAAATGAACAGCCTGAGAGCTGACGACACGGCTGTGTATTACTGTGCGAAAGATTACAAACTGGGAGCCACTC  270
V  96.0% (240/250)  IGHV3-30*18  227  ...AC..G................................G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.9% (10/11)    IGHD1-26*01  8    ------------------------------------------------------------------------------.......T...-  18

                                      ---------------->                                  
                                      R  G  P  C  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11638  271  GAGGTCCGTGTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.6% (40/41)    IGHJ4*02     8    ----------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_264390

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         391     6e-111
IGHD6-19*01                                                                                           18.0    0.64  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	CCACGGCTAC	AGCAGTGGC	GC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGCCACGGCTACAGCAGTGGCGCTGACTAC	GSHGYSSGADY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	288	269	19	0	93.4


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  V  S  E  F  S  F  T  N  F
                    Query_11639    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGTTTCTGAATTCAGCTTTACCAACTT  90
V  93.4% (269/288)  IGHV5-10-1*01  6    .................................................................G.....G..A...........G..A  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  D  Y  S  P
                    Query_11639    91   CTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAGGATTGATCCTAGTGACTCTTATACCGACTACAGCCC  180
V  93.4% (269/288)  IGHV5-10-1*01  96   ........G..........................................G...........................A..........  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  M  W  S  S  L  R  A  S  D  S  A
                    Query_11639    181  GTCCTTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCATCACAACTGCCTACCTAATGTGGAGCAGCCTGCGGGCCTCGGACAGCGC  270
V  93.4% (269/288)  IGHV5-10-1*01  186  ............................................GC...........GCA.............AA...........C...  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------CDR3-IMGT----------->                                  
                                          I  Y  Y  C  G  S  H  G  Y  S  S  G  A  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11639    271  CATTTATTATTGTGGGAGCCACGGCTACAGCAGTGGCGCTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  350
V  93.4% (269/288)  IGHV5-10-1*01  276  ...G.....C....C...--------------------------------------------------------------  293
                                          M  Y  Y  C  A                                                                 
D  100.0% (9/9)     IGHD6-19*01    7    ----------------------------.........-------------------------------------------  15
J  97.6% (40/41)    IGHJ4*02       8    ---------------------------------------..............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_117276

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           349     3e-98
IGHD2-15*01                                                                                           39.1    3e-07
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	T	GGATATTGTCGTGGTGGTGCCTGCTACTC	AACGGGTCGGGGGACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGATATTGTCGTGGTGGTGCCTGCTACTCAACGGGTCGGGGGACTTTTGACTAC	ARHGYCRGGACYSTGRGTFDY	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  S  T  H  H  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_11640  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGACTCCATCAGCAGCAGTACTCACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.4% (237/251)  IGHV4-39*01  49   .............................T.G............T....G.T..T...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  V  Y  Y  S  G  R  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11640  91   CTGGAGTGGATTGGGAGTGTCTATTATAGTGGGAGAACCTACGACAACCCGTCTCTCAAGAGTCGAGTCACCATATCTGTCGACACGTCC  180
V  94.4% (237/251)  IGHV4-39*01  139  ..................A................C......T..........C.......................C..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  H  G  Y  C  R  G  G 
                    Query_11640  181  AAGAATCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTTTTACTGTGCGAGACATGGATATTGTCGTGGTGGT  270
V  94.4% (237/251)  IGHV4-39*01  229  .....C.................................................A...............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.7% (26/29)    IGHD2-15*01  2    ------------------------------------------------------------------------.........A........  19

                                      CDR3-IMGT-------------------------->                                  
                                       A  C  Y  S  T  G  R  G  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11640  271  GCCTGCTACTCAACGGGTCGGGGGACTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  340
D  89.7% (26/29)    IGHD2-15*01  20   AG.........-----------------------------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_129823

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           346     2e-97
IGHD3-9*01                                                                                            29.5    2e-04
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATCCAC	GTATAACGATGTTTTGACTGG	CCAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATCCACGTATAACGATGTTTTGACTGGCCATAACTGGTTCGACCCC	ARGSTYNDVLTGHNWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  L  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11641  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCATTCTCAGTAGTTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-48*03  47   ....................G...............CCT...................C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  V  R  G  T  T  I  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  H  A  
                    Query_11641  91   AGTGGGTTTCATACATTAGTGTTAGAGGTACTACCATATACTACGCAGACTCTGTGCAGGGCCGATTTACCATCTCTAGAGACCACGCCA  180
V  94.4% (235/249)  IGHV3-48*03  137  ....................AG...T....G.........................A..........C........C......A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      T  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  S  T  Y  N  D  V  
                    Query_11641  181  CGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGATCCACGTATAACGATGTTT  270
V  94.4% (235/249)  IGHV3-48*03  227  A....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD3-9*01   1    ----------------------------------------------------------------------------....T.....A...  14

                                      IMGT--------------------->                                  
                                      L  T  G  H  N  W  F  D  P  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_11641  271  TGACTGGCCATAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  330
D  90.5% (19/21)    IGHD3-9*01   15   .......-----------------------------------------------------  21
J  98.0% (48/49)    IGHJ5*02     3    -----------.................................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_66756

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           283     1e-78
IGHD3-16*01                                                                                           12.2    31   
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	TTGGGG	CACCGCCCCAGTATGGG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGGGGCACCGCCCCAGTATGGGATGGACGTC	ARVGAPPQYGMDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	215	34	0	86.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  Y  T  F  S  D  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11642  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGGTACACATTTAGCGACTACGGCATGAACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  86.3% (215/249)  IGHV3-33*01  47   ...............................A.T...C..C..TAG...T......C.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  F  D  G  S  R  Q  F  Y  G  D  S  V  R  G  R  F  T  I  S  K  D  N  S  
                    Query_11642  91   AGTGGGTGGCTATCATCTGGTTTGATGGAAGTAGGCAATTTTATGGGGACTCCGTGAGGGGCCGATTCACCATCTCCAAAGACAATTCCA  180
V  86.3% (215/249)  IGHV3-33*01  137  ..........AG.T..A....A...........ATA...AC....CA..........A....................G...........  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  V  S  L  Q  M  N  S  L  R  S  D  D  S  A  V  Y  Y  C  A  R  V  G  A  P  P  Q  Y  
                    Query_11642  181  AGAACACGGTGTCTCTACAAATGAACAGCCTGAGAAGTGACGATTCGGCTGTCTACTACTGTGCGAGAGTTGGGGCACCGCCCCAGTATG  270
V  86.3% (215/249)  IGHV3-33*01  227  ........C...A...G..................GCC..G..CA.......G..T.............---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  16   ---------------------------------------------------------------------......---------------  21

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11642  271  GGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (42/42)   IGHJ6*02     21   --..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_66757

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-3*01                                                                                            10.3    117   
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GCTTG	ACGAT	CGCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGCTTGACGATCGCATACTACTTTGACTAC	ATGLTIAYYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11643  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  D  T  S 
                    Query_11643  91   CTAGAGTGGATTGGGTACATCTACTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTTACCATATCACTAGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ..G....................T..................................A...................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  D  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  L  T  I  A  Y  Y 
                    Query_11643  181  AAGGACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGCTTGACGATCGCATACTAC  270
V  96.4% (241/250)  IGHV4-31*03  229  ...A...............A.................................G.............G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-3*01   6    ---------------------------------------------------------------------------.....----------  10
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11643  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_66754

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           430     1e-122
IGHD6-6*01                                                                                            10.3    137   
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AACG	TCGTC	TTTCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAACGTCGTCTTTCAACTACTTCAACTACGGTATGGACGTC	ARETSSFNYFNYGMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	283	8	0	97.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_11644  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGTTA  90
V  97.3% (283/291)  IGHV1-46*01  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  D  G  D  T  T  Y  A  Q
                    Query_11644  91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGATGGTGACACAACCTACGCACA  180
V  97.3% (283/291)  IGHV1-46*01  96   ....................................................................G....AG.....G.........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  L  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_11644  181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACACTCTACATGGAGCTTAGCAGCCTGAGATCTGAGGACACGGC  270
V  97.3% (283/291)  IGHV1-46*01  186  .................................................G.............G..........................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  E  T  S  S  F  N  Y  F  N  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_11644  271  CGTGTATTACTGTGCGAGAGAAACGTCGTCTTTCAACTACTTCAACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  97.3% (283/291)  IGHV1-46*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD6-6*01   13   -------------------------.....------------------------------------------------------------  17
J  96.6% (57/59)    IGHJ6*02     4    -----------------------------------......A.T..............................................  58

                                          
                                        S 
                    Query_11644  361  CTCA  364
J  96.6% (57/59)    IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_66752

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           419     2e-119
IGHD3-22*01                                                                                           23.8    0.013 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCGTCCTGTAAAATATGGCC	CTATGAAAGTATTGGTTA	CTGTGGGTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCGTCCTGTAAAATATGGCCCTATGAAAGTATTGGTTACTGTGGGTTCTTTGACTAC	ARDPSCKIWPYESIGYCGFFDY	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  S  F  T  S  N 
                    Query_11645  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACAGCTTTACCAGCAAC  91
V  96.2% (279/290)  IGHV1-18*04  7    .................................................A..........................C..........T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  T  Y  N  G  N  T  K  Y  V  P 
                    Query_11645  92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGATGGATCAGCACTTACAATGGTAACACAAAATATGTACCG  181
V  96.2% (279/290)  IGHV1-18*04  97   .....................................T......................G...................C....C..A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  S  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_11645  182  AAGCTCCAGGGCAGAGTCACCATGACCTCAGACACATCCACGAGCACAGCCTACATGGAACTGAGGAGCCTGAGATCTGACGATACGGCC  271
V  96.2% (279/290)  IGHV1-18*04  187  ...........................A...............................G.......................C......  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------------CDR3-IMGT--------------------------->            
                                       V  Y  Y  C  A  R  D  P  S  C  K  I  W  P  Y  E  S  I  G  Y  C  G  F  F  D  Y  W  G  Q  G 
                    Query_11645  272  GTGTATTACTGTGCGAGAGACCCGTCCTGTAAAATATGGCCCTATGAAAGTATTGGTTACTGTGGGTTCTTTGACTACTGGGGCCAGGGA  361
V  96.2% (279/290)  IGHV1-18*04  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  88.9% (16/18)    IGHD3-22*01  7    -----------------------------------------......T....G......-------------------------------  24
J  100.0% (44/44)   IGHJ4*02     5    --------------------------------------------------------------------......................  26

                                                            
                                       T  L  V  T  V  S  S  
                    Query_11645  362  ACCCTGGTCACCGTCTCCTCAG  383
J  100.0% (44/44)   IGHJ4*02     27   ......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_66753

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGCCTCCTCTTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTCCTCTTCCTACGGTATGGACGTC	AREASSSYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11646  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_11646  91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  S  S  S  Y  G  M  D 
                    Query_11646  181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTCCTCTTCCTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  98.0% (48/49)    IGHJ6*02     14   -----------------------------------------------------------------------------.............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_11646  271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  98.0% (48/49)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_66750

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           358     4e-101
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ2*01                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCAAAGCAGG	TTACTATGATAATAGTGG	CCCAGGTCAAGAG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGCCAAAGCAGGTTACTATGATAATAGTGGCCCAGGTCAAGAGTTCGATCTC	TRAKAGYYDNSGPGQEFDL	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  E  F  T  F  S  H  Y  G  M  H  W  V  R  K  A  P  G  K  G  L  
                    Query_11647  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGAATTCACCTTCAGTCACTATGGCATGCACTGGGTCCGCAAGGCTCCAGGCAAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-33*01  47   ..............................G.............AG......................C.....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11647  91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAAAAGTATGCAGACTCCGTGAAGGGGCGATTCACCATCTCCAGAGACAACTCCG  180
V  96.0% (239/249)  IGHV3-33*01  137  ......................................T.C....................C.......................T...A  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      E  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  A  K  A  G  Y  Y  D  
                    Query_11647  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTACGAGAGCCAAAGCAGGTTACTATGATA  270
V  96.0% (239/249)  IGHV3-33*01  227  ..............................................................G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD3-22*01  4    -------------------------------------------------------------------------------...........  14

                                      -IMGT----------------------->                                  
                                      N  S  G  P  G  Q  E  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11647  271  ATAGTGGCCCAGGTCAAGAGTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCTTCAG  333
D  94.4% (17/18)    IGHD3-22*01  15   G......--------------------------------------------------------  21
J  97.7% (42/43)    IGHJ2*01     11   --------------------......................................C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_191670

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           322     2e-90
IGHD3-10*01                                                                                           10.3    115  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGA	CTTCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGACTTCAGGCCTTTGACTCC	ARGGLQAFDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  G  G  F  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_11648  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAACAGTGGTGGATTCTACTGGACTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  91.2% (228/250)  IGHV4-31*03  49   ........................................G.........T.A........GC...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       P  E  W  I  G  Y  I  F  Y  T  G  H  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  L  D  T  S 
                    Query_11648  91   CCAGAGTGGATTGGTTACATCTTTTACACTGGACACACCTACTACAATCCGTCCCTCAGGAGTCGACTTACCATATCACTAGACACATCT  180
V  91.2% (228/250)  IGHV4-31*03  139  .TG...........G.......A.....G...GAG............C..........A.......G...........G.......G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       E  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  L  Q  A  F  D 
                    Query_11648  181  GAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGGGGACTTCAGGCCTTTGAC  270
V  91.2% (228/250)  IGHV4-31*03  229  A...................G.....C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------.....---------------  20
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11648  271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.7% (43/44)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_306099

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD3-3*01                                                                                            10.3    134   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTAGGGGCGAGGGTA	ATTTT	CTTCAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAGGGGCGAGGGTAATTTTCTTCAGTAC	ARLRGEGNFLQY	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	110	4	0	96.5
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	294	276	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  D  F  R  
                    Query_11649  3    AGGTTCAGCTGGTGCAGTCTGGAGGAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACGACTTTAGGA  92
V  93.9% (276/294)  IGHV5-51*01  2    ....G...................C............................................G..........AG.....CC.  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      R  Y  W  I  G  W  V  R  Q  M  A  G  K  G  L  E  Y  M  G  I  I  Y  P  N  D  S  D  I  R  Y  
                    Query_11649  93   GATACTGGATCGGCTGGGTGCGCCAGATGGCCGGGAAAGGCCTGGAGTACATGGGGATCATCTATCCTAATGACTCTGATATCAGATACG  182
V  93.9% (276/294)  IGHV5-51*01  92   .C...........................C..................GG..................GG...........C.......A  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      G  P  S  F  K  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_11649  183  GTCCGTCCTTCAAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  93.9% (276/294)  IGHV5-51*01  182  .C.........C................C.............................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  M  Y  Y  C  A  R  L  R  G  E  G  N  F  L  Q  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_11649  273  CCGCCATGTATTACTGTGCGAGACTTAGGGGCGAGGGTAATTTTCTTCAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  359
V  93.9% (276/294)  IGHV5-51*01  272  ........................---------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                 
D  100.0% (5/5)     IGHD3-3*01   9    ---------------------------------------.....-------------------------------------------  13
J  97.3% (36/37)    IGHJ4*02     12   --------------------------------------------------.................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_66758

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           235     4e-64
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGC	AACC	TCGGGGAG	GACTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACCTCGGGGAGGACTCCCTACTACTATTACGGAATGGACGTC	ATSGRTPYYYYGMDV	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	17	9	0	65.4
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	12	9	0	57.1
FR3-IMGT	126	239	114	99	15	0	86.8
CDR3-IMGT (germline)	240	241	2	2	0	0	100
Total	N/A	N/A	238	194	44	0	81.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  M  S  G  G  S  F  N  G  Y  S  W  T  W  V  R  Q  R  P  G  K  G  L  E  
                    Query_11650  4    CCCTGAGACTCTCCTGTGCGATGTCTGGTGGGTCCTTCAATGGATATTCTTGGACCTGGGTCCGCCAGCGCCCCGGGAAGGGACTGGAGT  93
V  81.5% (194/238)  IGHV4-34*01  50   .....TCC...A....C..TG.C.A..............G...T..C.AC....G....A.........C...A........G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  E  I  S  H  F  K  T  V  N  Y  N  P  T  L  L  G  R  V  N  I  S  I  D  T  S  K  N  
                    Query_11650  94   GGATTGCGGAAATCAGTCATTTTAAAACCGTTAATTACAACCCGACACTCTTGGGTCGAGTCAACATATCGATAGACACCTCCAAGAACC  183
V  81.5% (194/238)  IGHV4-34*01  140  ......G........A....AG.GG..G.ACC..C.........T.C...AA.A.........C......AG.......G..........  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  S  G  R  T  P  Y  Y  Y  Y  
                    Query_11650  184  ACTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGCGCAACCTCGGGGAGGACTCCCTACTACTATTACG  273
V  81.5% (194/238)  IGHV4-34*01  230  .G..........A.....G...........................G........T..--------------------------------  287
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (8/8)     IGHD3-10*01  14   --------------------------------------------------------------........--------------------  21
J  96.6% (56/58)    IGHJ6*02     5    ----------------------------------------------------------------------------.........C....  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11650  274  GAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  96.6% (56/58)    IGHJ6*02     19   .T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_66759

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            291     5e-81
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	216	30	0	87.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11651  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.8% (216/246)  IGHV4-4*01   49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_11651  91   GAGTGGATTGGGGAGATCCATCATGGCGGGGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.8% (216/246)  IGHV4-4*01   139  ..............A...T.....A.T...AG............C.........A.............................T...AG  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_11651  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.8% (216/246)  IGHV4-4*01   229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01   13   ----------------------------------------------------------------------.....C..G...--------  24

                                      ----------->                                  
                                       G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_11651  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_19361

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     4e-93
IGHD3-16*01                                                                                           50.7    9e-11
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AAGAAACAAT	TATTATGATTACGTCTGGGGGAGTCATGGTTATAC	GGGAAGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAAACAATTATTATGATTACGTCTGGGGGAGTCATGGTTATACGGGAAGGTTTGACTTC	ARNNYYDYVWGSHGYTGRFDF	239	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	10	1	0	90.9
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	23	1	0	95.8
FR3-IMGT	125	238	114	110	4	0	96.5
CDR3-IMGT (germline)	239	240	2	2	0	0	100
Total	N/A	N/A	226	219	7	0	96.9


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  S  S  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  
                    Query_11652  15   GTGCAGTCTCTGGATTCACCTTTAGCAGCTTTGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTA  104
V  96.9% (219/226)  IGHV3-23*01  65   ......C.......................A...........................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_11652  105  GTGGTAGTGGTGGCAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCAAGAACACTCTCTATCTGC  194
V  96.9% (219/226)  IGHV3-23*01  155  .............T.....................................................T...........G..G.......  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------------------CDR3-IMGT----------
                                      Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  N  N  Y  Y  D  Y  V  W  G  S  H  G  Y  
                    Query_11652  195  AAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATATTACTGTGCAAGAAACAATTATTATGATTACGTCTGGGGGAGTCATGGTTATA  284
V  96.9% (219/226)  IGHV3-23*01  245  ................................G.............--------------------------------------------  290
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  91.4% (32/35)    IGHD3-16*01  2    --------------------------------------------------------..............T.........T...C.....  35

                                      ---------------->                                  
                                      T  G  R  F  D  F  W  G  R  G  T  H  V  T  V  S  S  
                    Query_11652  285  CGGGAAGGTTTGACTTCTGGGGCCGGGGAACCCACGTCACCGTCTCCTCAG  335
D  91.4% (32/35)    IGHD3-16*01  36   .--------------------------------------------------  36
J  90.7% (39/43)    IGHJ4*02     6    --------.......A........A........TG................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_39656

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         324     7e-91
IGHD3-16*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	GGGGGAGT	GCGGGTATTCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGGGGAGTGCGGGTATTCCTCTAC	AREGGVRVFLY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	56	27	24	3	0	88.9
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  R  L  S  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  V  R  Q  P  P  G  K  G  L  
                    Query_11653    4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTTACTCTATTAGCAGTGGTTATTACTGGGGCTGGGTCCGGCAGCCCCCAGGGAAGGGGCTGG  93
V  91.9% (227/247)  IGHV4-38-2*02  50   .....TCC...A....CA................C..C...........C............A...........................  139
                                           L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  G  S  V  Y  H  S  G  S  T  F  Y  S  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  
                    Query_11653    94   AGTGGATTGGGAGTGTCTATCATAGTGGGAGCACCTTCTACAGCCCGTCCCTCAAGAGCCGAGTCAGCATTTCAGTAGACACGTCCAAGA  183
V  91.9% (227/247)  IGHV4-38-2*02  140  ..............A.....................A.....A...............T.......C...A...................  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                        N  Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  V  R  V  F  L  
                    Query_11653    184  ACCAGTTCTCCCTGAAGGTTAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGAAGGGGGAGTGCGGGTATTCCTCT  273
V  91.9% (227/247)  IGHV4-38-2*02  230  .................C.G..C................................C...........-----------------------  296
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-16*01    18   --------------------------------------------------------------------........--------------  25
J  100.0% (38/38)   IGHJ4*02       11   ----------------------------------------------------------------------------------------..  12

                                        ->                                  
                                        Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11653    274  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (38/38)   IGHJ4*02       13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_19363

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     6e-104
IGHD7-27*01                                                                                           14.1    8.3   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCA	AACTGGG	AACTCAATAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGACGTCAAACTGGGAACTCAATATACAACTGGTTCGACCCC	SRRQTGNSIYNWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11654  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (239/243)  IGHV4-59*01  49   .......................................................G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11654  91   TGGATTGGATATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  ........G.................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  R  R  Q  T  G  N  S  I  Y  N 
                    Query_11654  181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTTCGAGACGTCAAACTGGGAACTCAATATACAAC  270
V  98.4% (239/243)  IGHV4-59*01  229  .............A...........................................G.....---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD7-27*01  3    --------------------------------------------------------------------.......---------------  9
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------------.....  5

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11654  271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (51/51)   IGHJ5*02     6    ..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_19362

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           366     2e-103
IGHD6-19*01                                                                                           16.1    2.3   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAAATATGGAACCCCCTGGGCAAAGTGA	TGGCTGGT	TT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAATATGGAACCCCCTGGGCAAAGTGATGGCTGGTTTTACTTTGACCAC	AKNMEPPGQSDGWFYFDH	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	240	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_11655  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.6% (240/246)  IGHV3-11*01  47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  N  T  G  T  T  V  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11655  91   AGTGGGTTTCATACATTAGTAATACTGGTACTACCGTATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  97.6% (240/246)  IGHV3-11*01  137  .....................G..G.....G....A......................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  N  M  E  P  P  G  Q  
                    Query_11655  181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAAAATATGGAACCCCCTGGGCAAA  270
V  97.6% (240/246)  IGHV3-11*01  227  ............A.....................................................------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      IMGT--------------------->                                  
                                      S  D  G  W  F  Y  F  D  H  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_11655  271  GTGATGGCTGGTTTTACTTTGACCACTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  330
D  100.0% (8/8)     IGHD6-19*01  12   ----........------------------------------------------------  19
J  95.7% (44/46)    IGHJ4*02     3    --------------.........T....................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_19365

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-72*01                                                                                           336     1e-94
IGHD2-2*01                                                                                            14.1    8.4  
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-72*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAG	TAGTAATGCAACCTCT	TAGTACC	CTCGTTGTTACCTC	TGATA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGAGTAGTAATGCAACCTCTTAGTACCCTCGTTGTTACCTCTGATATC	ARVVMQPLSTLVVTSDI	236	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	24	0	0	100
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	121	30	29	1	0	96.7
FR3-IMGT	122	235	114	109	5	0	95.6
CDR3-IMGT (germline)	236	242	7	7	0	0	100
Total	N/A	N/A	229	222	7	0	96.9


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><----------C
                                       S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  T  R  N  K 
                    Query_11656  14   TCTGGATTCACCTTCAGTGACCACTACATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGTCGTACTAGAAACAAA  103
V  96.9% (222/229)  IGHV3-72*01  73   ..........................................................................C...............  162
                                       S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  T  R  N  K 

                                      DR2-IMGT---------><----------------------------------------------------FR3-IMGT-----------
                                       A  N  S  Y  T  T  E  Y  A  A  S  V  K  G  R  F  S  I  S  R  D  D  S  M  N  L  L  Y  L  Q 
                    Query_11656  104  GCTAACAGTTACACCACCGAATACGCCGCGTCTGTGAAAGGCAGATTCAGCATCTCAAGAGATGATTCAATGAACCTACTGTATCTGCAA  193
V  96.9% (222/229)  IGHV3-72*01  163  .................A...............................C....................A....TC.............  252
                                       A  N  S  Y  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  S  L  Y  L  Q 

                                      -----------------------------------------><--------------------CDR3-IMGT------------------
                                       M  N  S  L  K  T  E  D  T  A  M  Y  Y  C  A  R  V  V  M  Q  P  L  S  T  L  V  V  T  S  D 
                    Query_11656  194  ATGAACAGCCTGAAAACCGAGGACACGGCCATGTATTACTGTGCTAGAGTAGTAATGCAACCTCTTAGTACCCTCGTTGTTACCTCTGAT  283
V  96.9% (222/229)  IGHV3-72*01  253  ..............................G..................-----------------------------------------  301
                                       M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R                                           
D  100.0% (7/7)     IGHD2-2*01   13   -----------------------------------------------------------------.......------------------  19
J  100.0% (41/41)   IGHJ3*02     10   --------------------------------------------------------------------------------------....  13

                                      -->                                  
                                       I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11656  284  ATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  320
J  100.0% (41/41)   IGHJ3*02     14   .....................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_39652

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     3e-98
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CATTGGCT	TATTACGATTCTCGGAGTGGTTA	CCCCTCGG	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCATTGGCTTATTACGATTCTCGGAGTGGTTACCCCTCGGGGTACTTCGATCTC	ARALAYYDSRSGYPSGYFDL	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  R  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_11657  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTCGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  94.8% (236/249)  IGHV4-31*03  50   .....TCC...A.................G....................T.......................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  
                    Query_11657  94   TGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTATAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCTA  183
V  94.8% (236/249)  IGHV4-31*03  140  ...........................................C.....................G........................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  L  A  Y  Y  D  S  
                    Query_11657  184  AGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACTGACGCGGACACGGCCGTATATTACTGCGCGAGAGCATTGGCTTATTACGATTCTC  273
V  94.8% (236/249)  IGHV4-31*03  230  ....................C....C..........C...............G........T.......---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  91.3% (21/23)    IGHD3-3*01   2    -----------------------------------------------------------------------------..........T.T  14

                                      R3-IMGT------------------------>                                  
                                      R  S  G  Y  P  S  G  Y  F  D  L  W  G  R  G  T  L  V  S  V  S  S  
                    Query_11657  274  GGAGTGGTTACCCCTCGGGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCAGTGTCTCCTCAG  339
D  91.3% (21/23)    IGHD3-3*01   15   ..........--------------------------------------------------------  24
J  97.9% (47/48)    IGHJ2*01     6    ------------------....................................C...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_19367

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_11658  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_11658  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_11658  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_11658  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_19369

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           374     7e-106
IGHD3-3*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	242	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11659  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (242/245)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_11659  91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.8% (242/245)  IGHV4-34*01  139  .........................................................................T................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_11659  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  98.8% (242/245)  IGHV4-34*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11659  271  GCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_19368

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           336     1e-94
IGHD3-10*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCCGCCGC	TTCGGGGAGTT	GACGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCCGCCGCTTCGGGGAGTTGACGCTTGACTAC	ARDGRRFGELTLDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  S  V  S  T  N  Y  M  S  W  F  R  Q  A  P  G  K  G  L  
                    Query_11660  1    GGTCCCTGAGACTCTCCTGTGCAGTTTCTGGGTTCAGCGTCAGTACCAATTACATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-53*01  47   ........................CC..........C........G...C............G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  L  Y  S  G  G  V  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_11660  91   AGTGGGTCTCAGTTCTTTATAGTGGTGGTGTCACATTCTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.5% (231/247)  IGHV3-53*01  137  ..............A.......C......AG.....A.....................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  I  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  R  R  F  G  E  L  
                    Query_11660  181  ACACATTGTATCTTCAAATGAATATCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGAGATGGCCGCCGCTTCGGGGAGTTGA  270
V  93.5% (231/247)  IGHV3-53*01  227  ....GC................C.G..............................C...........-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD3-10*01  13   -----------------------------------------------------------------------------...........--  23

                                      ---------->                                  
                                      T  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11660  271  CGCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (42/42)   IGHJ4*02     7    ---..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_331747

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCCCTAAGTG	ATTACGATTTTTGGAGT	TCGGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCCCTAAGTGATTACGATTTTTGGAGTTCGGGCTGGTTCGACCCC	AKPLSDYDFWSSGWFDP	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	125	24	21	3	0	87.5
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	230	220	10	0	95.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  T  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  
                    Query_11661  16   GTGCAGCCTCTGGATTCACCTTTACCGACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGGAGTGGGTCTCAGGTATTA  105
V  95.7% (220/230)  IGHV3-23*01  65   ........................G.AG.................................G......................C.....  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  G  V  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_11661  106  GTGGTAGCGGTGGTGTCACAAACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGC  195
V  95.7% (220/230)  IGHV3-23*01  155  .......T......AG....T.....................................................................  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------------CDR3-IMGT----------------
                                      Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  P  L  S  D  Y  D  F  W  S  S  G  W  F  
                    Query_11661  196  AAATGAACAGCCTGAGAGCCGAGGACACGGCCTTATATTACTGTGCGAAACCCCTAAGTGATTACGATTTTTGGAGTTCGGGCTGGTTCG  285
V  95.7% (220/230)  IGHV3-23*01  245  ................................G.................----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (17/17)   IGHD3-3*01   3    ------------------------------------------------------------.................-------------  19
J  97.9% (46/47)    IGHJ5*02     5    ----------------------------------------------------------------------------------........  12

                                      ---->                                  
                                      D  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11661  286  ACCCCTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.9% (46/47)    IGHJ5*02     13   ............A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_39658

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           438     5e-125
IGHD6-13*01                                                                                           12.2    35    
IGHJ3*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGGAAGCGGGCCGCACA	TGGTAC	GC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGGAAGCGGGCCGCACATGGTACGCCTTTTGATATC	AWKRAAHGTPFDI	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	283	3	0	99


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_11662  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCACCTA  90
V  99.0% (283/286)  IGHV5-51*01  6    ......................................................................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_11662  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  99.0% (283/286)  IGHV5-51*01  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11662  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  99.0% (283/286)  IGHV5-51*01  186  ............................................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        I  Y  Y  C  A  W  K  R  A  A  H  G  T  P  F  D  I  W  G  Q  G  T  M  V  S  V  S  S  
                    Query_11662  271  CATTTATTACTGTGCGTGGAAGCGGGCCGCACATGGTACGCCTTTTGATATCTGGGGCCAGGGGACTATGGTCAGCGTCTCTTCAG  356
V  99.0% (283/286)  IGHV5-51*01  276  ...G............----------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                       
D  100.0% (6/6)     IGHD6-13*01  16   ---------------------------------......-----------------------------------------------  21
J  93.3% (42/45)    IGHJ3*02     6    -----------------------------------------...................A.....A.......C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_18010

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           327     9e-92
IGHD3-10*01                                                                                           12.2    31   
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTACCTGGAGCACT	TGGTTC	CGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACCTGGAGCACTTGGTTCCGGACTACGGTATGGACGTC	ARDYLEHLVPDYGMDV	230	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	23	1	0	95.8
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	110	4	0	96.5
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	217	8	0	96.4


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  W  Y  D
                    Query_11663  13   GTCTGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCACTTATATGGTATGA  102
V  96.4% (217/225)  IGHV3-33*01  72   ....................G.......................................................G.............  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  V  Y  L  Q  M  N
                    Query_11663  103  TGGAAGTAAAAAGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCTAAGAATACGGTGTATCTGCAAATGAA  192
V  96.4% (217/225)  IGHV3-33*01  162  .........T..A..................................................C.....C...C................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-------------------CDR3-IMGT------------------>     
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  L  E  H  L  V  P  D  Y  G  M  D  V  W  G
                    Query_11663  193  CAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATTACCTGGAGCACTTGGTTCCGGACTACGGTATGGACGTCTGGGG  282
V  96.4% (217/225)  IGHV3-33*01  252  ...........................G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (6/6)     IGHD3-10*01  10   -----------------------------------------------------------......-------------------------  15
J  98.0% (49/50)    IGHJ6*02     13   --------------------------------------------------------------------......................  34

                                                                  
                                        Q  G  T  T  V  T  V  S  S 
                    Query_11663  283  CCAAGGGACCACGGTCACCGTCTCGTCA  310
J  98.0% (49/50)    IGHJ6*02     35   ........................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_18012

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           416     2e-118
IGHD2-2*01                                                                                            10.3    135   
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCAAGGC	ACCAG	TTCCCTCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCAAGGCACCAGTTCCCTCTTACTTTGACTAC	ARDPKAPVPSYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  F  T  Y 
                    Query_11664  2    CAGCTGGTGCAGTCTGGAGCCGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCCGGTTACACCTTTTTCACCTAC  91
V  95.9% (278/290)  IGHV1-18*04  7    ....................T...............................................T............AC..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  S  N  Y  A  Q 
                    Query_11664  92   GGCATCCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACTCAAACTATGCACAG  181
V  95.9% (278/290)  IGHV1-18*04  97   ..T...AG...................................................................A..............  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  Y  D  D  T  A 
                    Query_11664  182  AAACTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTCAGATATGACGACACGGCC  271
V  95.9% (278/290)  IGHV1-18*04  187  ..G....................................................................G....C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  D  P  K  A  P  V  P  S  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11664  272  GTGTATTACTGTGCGAGAGATCCCAAGGCACCAGTTCCCTCTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  95.9% (278/290)  IGHV1-18*04  277  ....................--------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (5/5)     IGHD2-2*01   17   -----------------------------.....------------------------------------------------------  21
J  100.0% (46/46)   IGHJ4*02     3    ------------------------------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_18013

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           313     2e-87
IGHD4-17*01                                                                                           25.7    0.003
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGCGGCAC	TGACTACGTTGACTAC	GGGGAGGCCGCTCCACGGGAGGTG	GGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGACGGCGGCACTGACTACGTTGACTACGGGGAGGCCGCTCCACGGGAGGTGGGTCTGGACGTC	VRDGGTDYVDYGEAAPREVGLDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  G  Y  A  I  H  W  V  R  R  A  P  G  K  G  L  
                    Query_11665  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAATGGCTATGCCATACACTGGGTCCGCCGGGCTCCAGGCAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-33*01  47   ..........................................G.A......G...G.............A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  V  D  G  N  T  Q  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_11665  91   AGTGGGTGGCCATTATTTGGGTTGATGGAAATACTCAAAACTATGCTGACTCCGTGAAGGGCCGATTCACCGTTTCCAGAGACAATTCCA  180
V  90.0% (225/250)  IGHV3-33*01  137  ..........AG....A...TA........G..A.A..T.......A........................A.C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  V  Y  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  V  R  D  G  G  T  D  Y  V  
                    Query_11665  181  AGAACACAGTGTATTTGCAAATGAACAGCCTGACGGCCGAAGACACGGCTGTCTATTACTGTGTGAGAGACGGCGGCACTGACTACGTTG  270
V  90.0% (225/250)  IGHV3-33*01  227  .......GC.....C..................GA.....G...........G..........C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.8% (15/16)    IGHD4-17*01  1    -------------------------------------------------------------------------------........G..  11

                                      --CDR3-IMGT----------------------------->                                 
                                      D  Y  G  E  A  A  P  R  E  V  G  L  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_11665  271  ACTACGGGGAGGCCGCTCCACGGGAGGTGGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  344
D  93.8% (15/16)    IGHD4-17*01  12   .....---------------------------------------------------------------------  16
J  95.6% (43/45)    IGHJ6*02     18   -----------------------------...A..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_18014

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           425     3e-121
IGHD2-8*02                                                                                            14.1    9.7   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GTGAGGATTTCTTTGATG	CTGGTGG	GTCCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGAGGATTTCTTTGATGCTGGTGGGTCCCACTACTACGGCTTGGACGTC	ARREDFFDAGGSHYYGLDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	281	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  N  F  A  A  F
                    Query_11666  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAACTTTGCCGCCTT  90
V  96.9% (281/290)  IGHV5-51*01  6    .............................................................................G....A..AG..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_11666  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCCGGTGACTCTGATACCAGATACAGCCC  180
V  96.9% (281/290)  IGHV5-51*01  96   ...............................................................T..........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  A  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  R  A  S  D  T  A
                    Query_11666  181  GTCCTTCCAAGGCCAGGTCGCCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACACCGC  270
V  96.9% (281/290)  IGHV5-51*01  186  ...................A....C.................................................A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  R  E  D  F  F  D  A  G  G  S  H  Y  Y  G  L  D  V  W  G  Q  G  T  T  V
                    Query_11666  271  CATGTATTACTGTGCGAGACGTGAGGATTTCTTTGATGCTGGTGGGTCCCACTACTACGGCTTGGACGTCTGGGGCCAAGGGACCACGGT  360
V  96.9% (281/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-8*02   12   --------------------------------------.......---------------------------------------------  18
J  94.3% (50/53)    IGHJ6*02     10   --------------------------------------------------..........TA............................  49

                                                   
                                        T  V  S  S 
                    Query_11666  361  CACCGTCTCTTCA  373
J  94.3% (50/53)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_191677

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           350     8e-99
IGHD2-21*01                                                                                           12.2    33   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTTCTTTGGCGATTTCGA	CTATTC	GGGCCCCCTATCCACCCCACA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTCTTTGGCGATTTCGACTATTCGGGCCCCCTATCCACCCCACAAC	ARLSLAISTIRAPYPPHN	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  A  S  I  S  G  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_11667  1    ACCCTGTCCCTCACCTGCTCTGTTTCTGGTGCCTCCATCAGTGGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  94.8% (237/250)  IGHV4-39*01  49   ..................A....C.......G.........CA..............................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S 
                    Query_11667  91   CTGGAGTGGATAGGGACTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGGGTCGAGTCACCATATCCGTAGACACGTCC  180
V  94.8% (237/250)  IGHV4-39*01  139  ...........T....G...........................................A.............................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  D  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  S  L  A  I  S  T 
                    Query_11667  181  AAGGACCAGTTCTCCCTGAAACTGAACTCTGTGACCGCCGCAGACACGGCTCTGTATTACTGTGCGAGACTTTCTTTGGCGATTTCGACT  270
V  94.8% (237/250)  IGHV4-39*01  229  ...A................G....G.........................G..................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-21*01  22   ----------------------------------------------------------------------------------------..  23

                                      -IMGT--------------------->                                  
                                       I  R  A  P  Y  P  P  H  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11667  271  ATTCGGGCCCCCTATCCACCCCACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  100.0% (6/6)     IGHD2-21*01  24   ....---------------------------------------------------------  27
J  100.0% (36/36)   IGHJ4*02     13   -------------------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_18016

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            324     7e-91
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	N/A	TGGGGG	GGGCGGGATGGCAACCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGGGGGGCGGGATGGCAACCCGACTAC	VGGAGWQPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  L  I  F  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11668  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGACTCATCTTTAGTGACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.6% (225/243)  IGHV3-7*01   47   ....................G...........T...C.......AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  E  Q  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  G  D  N  A  
                    Query_11668  91   AGTGGGTGGCCAACATAGAGCAAGATGGAAGTGAGAAAAATTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCGGAGACAACGCCA  180
V  92.6% (225/243)  IGHV3-7*01   137  .................A....................T.C....................................A............  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  V  F  L  Q  M  N  S  R  R  A  E  D  T  A  V  Y  F  C  V  G  G  A  G  W  Q  P  D  
                    Query_11668  181  AGAATTCAGTGTTTCTGCAAATGAATAGCCGGAGAGCCGAGGACACGGCTGTGTACTTTTGTGTGGGGGGGGCGGGATGGCAACCCGACT  270
V  92.6% (225/243)  IGHV3-7*01   227  ....C...C...A............C....T........................T.AC....---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (6/6)     IGHD3-16*01  17   ---------------------------------------------------------------......---------------------  22
J  100.0% (38/38)   IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                
                                      Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11668  271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  304
J  100.0% (38/38)   IGHJ4*02     13   ..................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_18017

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           349     2e-98
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACATG	ATTACCATGAT	TCCA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAACATGATTACCATGATTCCAGATGCTTTTGATATC	ARDNMITMIPDAFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  S  S  I  N  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  A 
                    Query_11669  1    ACCCTGTCCCTCACCTGTACTGTCTCTGGTAGCTCCATCAACAGTGGAGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGCC  90
V  94.4% (237/251)  IGHV4-31*02  49   ..............................G.........G......T........................................G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  D  S  G  G  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_11669  91   CTGGAGTGGATTGGATACATCTATGACAGTGGGGGCACCTCCTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCACTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*02  139  ..............G.........T........A......A...........................T.........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  D  N  M  I  T  M  I 
                    Query_11669  181  AGGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACTGTCGCGGACACGGCCGTATATTACTGTGCGAGAGATAACATGATTACCATGATT  270
V  94.4% (237/251)  IGHV4-31*02  229  .A...................C...............C...............G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD3-22*01  3    ------------------------------------------------------------------------------.....T.....-  13

                                      ----------------->                                  
                                       P  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11669  271  CCAGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  100.0% (49/49)   IGHJ3*02     2    ---.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_18018

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           375     3e-106
IGHD6-13*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCTCGCCACAGAA	AGCAGCAGCT	ATAACTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCTCGCCACAGAAAGCAGCAGCTATAACTTACTACTTTGACTAC	ARVSPQKAAAITYYFDY	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	242	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  H  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11670  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACCACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.2% (242/244)  IGHV4-59*01  49   ................................................T.........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11670  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  99.2% (242/244)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  P  Q  K  A  A  A  I 
                    Query_11670  181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTCTCGCCACAGAAAGCAGCAGCTATA  270
V  99.2% (242/244)  IGHV4-59*01  229  ....................C...........................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  7    -----------------------------------------------------------------------------..........---  16

                                      ----------------->                                  
                                       T  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11670  271  ACTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  100.0% (48/48)   IGHJ4*02     1    ----................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_98555

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           347     7e-98
IGHD6-19*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAACGGCTGTAT	CAGTGACTGG	CACCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAACGGCTGTATCAGTGACTGGCACCCTTGACTAC	ARDRTAVSVTGTLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  N  Y  N  S  H  A  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11671  1    GGTCCCTGAGACTCTCCTGTGTTGCGTCTGGATTCAACTACAATAGCCATGCCTTGCACTGGGTCCGCCAGGCTCCGGGCAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-33*01  47   .....................CA.............C..T..G....T...G.A......................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  E  D  S  V  R  G  R  F  S  I  S  R  D  N  S  
                    Query_11671  91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGAAGACTCCGTGAGGGGCCGGTTCAGCATCTCCAGAGACAATTCCA  180
V  94.4% (236/250)  IGHV3-33*01  137  .............................................C...........A......A....C....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  T  A  V  S  V  
                    Query_11671  181  AGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATAGAACGGCTGTATCAGTGA  270
V  94.4% (236/250)  IGHV3-33*01  227  ............................C.........................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD6-19*01  9    ------------------------------------------------------------------------------------.....G  14

                                      ---------------->                                  
                                      T  G  T  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11671  271  CTGGCACCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  90.0% (9/10)     IGHD6-19*01  15   ....-----------------------------------------------  18
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_98557

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  *  S  P  G  K  G  L  E 
                    Query_11672  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGTAGTCCCCAGGGAAGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   ...............................G........G.AG..A...................C..C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_11672  91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.2% (226/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_11672  181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.2% (226/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11672  271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_98556

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           386     1e-109
IGHD1-26*01                                                                                           12.2    31    
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATAT	GTGGGA	AGGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATATGTGGGAAGGTACTACTTTGACTAC	AREYVGRYYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	249	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_11673  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  99.2% (249/251)  IGHV4-61*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  Y  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11673  91   CTGGAGTGGATTGGGTATATCTATTACAGTGGGTACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  99.2% (249/251)  IGHV4-61*01  139  .................................AG.......................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  Y  V  G  R  Y  Y 
                    Query_11673  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAATATGTGGGAAGGTACTAC  270
V  99.2% (249/251)  IGHV4-61*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-26*01  7    ---------------------------------------------------------------------------......---------  12
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11673  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_98551

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           311     4e-87
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	239	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	16	8	0	66.7
FR3-IMGT	125	238	114	107	7	0	93.9
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	233	216	17	0	92.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 
                    Query_11674  14   TGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATT  103
V  92.7% (216/233)  IGHV3-21*01  64   ...........................AG.............................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  K  K  S  V  F  L 
                    Query_11674  104  AGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCAAGAAGTCAGTGTTTCTG  193
V  92.7% (216/233)  IGHV3-21*01  154  ...AG.AG..G..G.T....A........A.......................................G.......C...C...A....  243
                                       S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------------------CDR3-IMGT-------------
                                       Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  G  Y  P  L  D  G 
                    Query_11674  194  CAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGT  283
V  92.7% (216/233)  IGHV3-21*01  244  .......................G...........G.................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (15/15)   IGHD3-22*01  11   ---------------------------------------------------------------...............------------  25
J  100.0% (47/47)   IGHJ6*02     16   -------------------------------------------------------------------------------------.....  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11674  284  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  325
J  100.0% (47/47)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_98550

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_11675  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_11675  91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_11675  181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_11675  271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_62989

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         324     8e-91
IGHD3-10*01                                                                                           16.1    2.4  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CATGGA	GGTCCGGGGAATTA	CCAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACATGGAGGTCCGGGGAATTACCAGTTTGACTAC	ARHGGPGNYQFDY	281	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	67	56	52	4	0	92.9
CDR1-IMGT	68	91	24	18	6	0	75
FR2-IMGT	92	142	51	50	1	0	98
CDR2-IMGT	143	166	24	22	2	0	91.7
FR3-IMGT	167	280	114	94	20	0	82.5
CDR3-IMGT (germline)	281	286	6	5	1	0	83.3
Total	N/A	N/A	275	241	34	0	87.6


Alignments

                                        <-----------------------FR1-IMGT-----------------------><-------CDR1-IMGT------><---------
                                           G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  D  T  K  W  I  T  W  
                    Query_11676    12   CTGGTGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAGGATCTCCTGTAAGGCTTCTGGATACAGTTTTGACACCAAGTGGATCACCTGGG  101
V  87.6% (241/275)  IGHV5-10-1*01  20   ....A...........A........G.........................G............C...AC..G.T.C.......G.....  109
                                           G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W  I  S  W  

                                        -----------FR2-IMGT---------------------><-------CDR2-IMGT------><------------------------
                                        V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  H  S  N  S  S  F  Q  G  
                    Query_11676    102  TGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATAGATCCCAGTGACTCTTATACCCATTCCAACTCGTCCTTCCAAGGAC  191
V  87.6% (241/275)  IGHV5-10-1*01  110  ...........................................T.....T...............A.C.A..G.C.............C.  199
                                        V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P  S  F  Q  G  

                                        ----------------------------FR3-IMGT----------------------------------------------------><
                                        H  V  T  I  S  V  A  R  S  T  T  P  A  Y  M  Q  W  T  S  L  E  A  S  D  S  G  I  Y  F  C  
                    Query_11676    192  ACGTCACCATCTCGGTTGCCAGGTCCACCACCCCTGCCTACATGCAGTGGACCAGCCTGGAGGCCTCGGACAGCGGCATTTATTTCTGTG  281
V  87.6% (241/275)  IGHV5-10-1*01  200  .............A.C..A..A.....T..G.A........C.........G.......A............C..C...G....A.....  289
                                        H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M  Y  Y  C  

                                        --------------CDR3-IMGT-------------->                                  
                                        A  R  H  G  G  P  G  N  Y  Q  F  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_11676    282  CGCGACATGGAGGTCCGGGGAATTACCAGTTTGACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  353
V  87.6% (241/275)  IGHV5-10-1*01  290  ..A..-------------------------------------------------------------------  294
                                        A  R                                                                    
D  85.7% (12/14)    IGHD3-10*01    11   -----------...T......G...-----------------------------------------------  24
J  97.7% (42/43)    IGHJ4*02       6    -----------------------------.........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_62988

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD3-3*01                                                                                            23.8    0.011
IGHJ5*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCTGTCCCGC	ATTATGGTTTTTGGAATGATTATT	CCAAAATCTAACTCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTGTCCCGCATTATGGTTTTTGGAATGATTATTCCAAAATCTAACTCTTTCGACACC	ARGLSRIMVFGMIIPKSNSFDT	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  Y  G  G  S  F  N  G  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11677  1    ACCCTGTCCCTCACCTGCTCTGTCTATGGTGGGTCGTTCAATGGTCACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  92.2% (226/245)  IGHV4-34*01  49   ..................G................C....G....T............................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  D  T  N  Y  N  S  S  L  K  S  R  V  T  L  S  V  D  T  S  R  N 
                    Query_11677  91   TGGATTGGGGAAATTTCTCATAGTGGAGACACCAACTACAACTCGTCCCTCAAGAGTCGAGTCACCTTGTCAGTTGACACGTCCAGGAAC  180
V  92.2% (226/245)  IGHV4-34*01  139  ..............CAA..........AG.............C.......................A.A.....A..........A....  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  T  S  L  T  V  A  D  T  A  V  Y  Y  C  A  R  G  L  S  R  I  M  V  F  G 
                    Query_11677  181  CAGTTCTCCCTGAAGCTGACCTCCCTGACCGTCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCCTGTCCCGCATTATGGTTTTTGGA  270
V  92.2% (226/245)  IGHV4-34*01  229  ...................G...TG......C...............G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  83.3% (20/24)    IGHD3-3*01   3    ---------------------------------------------------------------------------....C.A........  17

                                      -IMGT--------------------------->                                  
                                       M  I  I  P  K  S  N  S  F  D  T  W  G  P  G  T  L  V  T  V  S  S  
                    Query_11677  271  ATGATTATTCCAAAATCTAACTCTTTCGACACCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  337
D  83.3% (20/24)    IGHD3-3*01   18   G..G.....----------------------------------------------------------  26
J  95.3% (41/43)    IGHJ5*02     9    ------------------------......C.........A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_62987

Length=417
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           439     2e-125
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGCCTACTTTCTTAGTTGGGGTTACTCTGGTA	GTATAACAGCAGCTGG	CGAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTAC	ARHAYFLSWGYSGSITAAGEIDY	292	360	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	72	2	0	97.3
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	113	1	0	99.1
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	295	288	7	0	97.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  A  
                    Query_11678  5    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTGCCA  94
V  97.6% (288/295)  IGHV5-51*01  2    ..G.....................................C........................................G....A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  
                    Query_11678  95   CCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACA  184
V  97.6% (288/295)  IGHV5-51*01  92   G...............................................................................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  
                    Query_11678  185  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACA  274
V  97.6% (288/295)  IGHV5-51*01  182  .............................................................................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------------CDR3-IMGT----------------------------->    
                                      T  A  M  Y  Y  C  A  R  H  A  Y  F  L  S  W  G  Y  S  G  S  I  T  A  A  G  E  I  D  Y  W  
                    Query_11678  275  CCGCCATGTATTACTGTGCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTACTGGG  364
V  97.6% (288/295)  IGHV5-51*01  272  .........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  93.8% (15/16)    IGHD6-13*01  3    ---------------------------------------------------------.....G..........-----------------  18
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------------------------------------............  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_11678  365  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  394
J  100.0% (42/42)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40919688


Query= Query_62986

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGGGAA	AACGAC	TGGGATCGTAGGTGGTCCGGT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGGGAAAACGACTGGGATCGTAGGTGGTCCGGTTTTCACTTC	ASRENDWDRRWSGFHF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	224	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  C  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11679  1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTTGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.6% (224/242)  IGHV4-59*08  49   ....................T.........G............G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       L  I  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S  R  N 
                    Query_11679  91   TTGATTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGTCGACTCACCATCTCAGTAGACACGTCGAGGAAC  180
V  92.6% (224/242)  IGHV4-59*08  139  .G......G...A........A........A.....................A.......G.......A..............C.A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  S  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  N  D  W  D  R  R  W 
                    Query_11679  181  CAGTTCTCCCTGAGCGTGAACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCGAGCCGGGAAAACGACTGGGATCGTAGGTGG  270
V  92.6% (224/242)  IGHV4-59*08  229  .............AGC...G.........C................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD1-1*01   12   ---------------------------------------------------------------------......---------------  17

                                      -------------->                                  
                                       S  G  F  H  F  W  G  P  G  T  L  V  T  V  S  S  
                    Query_11679  271  TCCGGTTTTCACTTCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  319
J  93.0% (40/43)    IGHJ4*02     6    ------...G...A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_62985

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         329     3e-92
IGHD3-16*02                                                                                           12.2    32   
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGT	TCGTTA	CCCAATCTTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTTCGTTACCCAATCTTGGCTACTACTACGGTATGGACGTC	ARDRSLPNLGYYYGMDV	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  D  V  S  G  Y  T  I  R  S  D  N  Y  W  G  W  I  R  Q  P  P  G  Q  G  L 
                    Query_11680    1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTTACACCATAAGGAGTGATAACTACTGGGGCTGGATCCGGCAGCCCCCAGGGCAGGGGCTG  90
V  92.3% (229/248)  IGHV4-38-2*02  49   ..................AC.............T....C..C....G.T................................A........  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  M  Y  H  S  G  S  A  Y  Y  N  P  S  L  Q  S  R  V  A  I  S  V  D  T  S  K 
                    Query_11680    91   GAGTGGATTGGGAGTATGTATCATAGTGGGAGCGCCTACTACAACCCGTCCCTCCAGAGTCGAGTCGCCATATCCGTAGACACGTCCAAG  180
V  92.3% (229/248)  IGHV4-38-2*02  139  .................C...............A....................A...........A.......A...............  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                         N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  S  L  P  N  L  G 
                    Query_11680    181  AACCAGTTCTCCCTGAAGCTGAATTCCGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATCGTTCGTTACCCAATCTTGGC  270
V  92.3% (229/248)  IGHV4-38-2*02  229  ......................GC..T........C..A...........G.................----------------------  296
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD3-16*02    28   ------------------------------------------------------------------------......------------  33
J  96.4% (53/55)    IGHJ6*02       8    -----------------------------------------------------------------------------------------.  8

                                        -------------------->                                 
                                         Y  Y  Y  G  M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_11680    271  TACTACTACGGTATGGACGTCTGGGGCCAAGGGGCCACCGTCACCGTCTCCTCA  324
J  96.4% (53/55)    IGHJ6*02       9    .................................A....G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_62984

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            311     4e-87
IGHD1-7*01                                                                                            12.2    32   
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCGACCGA	GGAACT	GTTAACCTCTTCGAGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACCGAGGAACTGTTAACCTCTTCGAGAATGCTCTTAGTATC	AADRGTVNLFENALSI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  R  G  H  I  T  S  S  H  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_11681  1    ACCCTGTCCCTCACCTGCGCTGTCTCTCGTGGCCACATCACCAGTAGTCACTGGTGGAACTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.9% (221/243)  IGHV4-4*02   49   ...........................G.....TC.....G.......A.........GT..............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  Q  I  Y  Q  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  K  S  R 
                    Query_11681  91   GAGTGGATTGGACAAATTTATCAGAGTGGGAGCACCAATTATAACCCGTCCCTCAGGAGTCGAGTCACCATTTCAGTGGACAAGTCCAGG  180
V  90.9% (221/243)  IGHV4-4*02   139  ...........GG....C.....T..............C..C.............A...............A.....A..........A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  L  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  A  D  R  G  T  V  N  L  F 
                    Query_11681  181  AACCTCTTCTCCCTGACGCTGACCTCTGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGGCCGACCGAGGAACTGTTAACCTCTTC  270
V  90.9% (221/243)  IGHV4-4*02   229  ....AG..........A.....G...........................G............---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (6/6)     IGHD1-7*01   10   ------------------------------------------------------------------------......------------  15

                                      ----------------->                                  
                                       E  N  A  L  S  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11681  271  GAGAATGCTCTTAGTATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  93.8% (45/48)    IGHJ3*02     3    ----.....T..GA......................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_62983

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGTGAGGAAGGA	TACTATGATACTAGTGGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGTGAGGAAGGATACTATGATACTAGTGGTTATTCGGACTAT	AKDGEEGYYDTSGYSDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  T  P  G  K  G  L  
                    Query_11682  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGATATGCCATGTCCTGGGTCCGCCAGACTCCAGGGAAGGGCCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ...........................................C..C.........AG.............G.............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  V  S  G  S  G  G  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11682  91   AGTGGGTCTCAACAGTGAGTGGTAGTGGAGGTGGCACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  ...........G.TA.T...........T...A..........C..............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  I  Y  Y  C  A  K  D  G  E  E  G  Y  Y  
                    Query_11682  181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAACCGAGGACACGGCCATATATTACTGTGCGAAAGATGGTGAGGAAGGATACTATG  270
V  93.6% (234/250)  IGHV3-23*01  227  ..............C....................G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.5% (21/22)    IGHD3-22*01  5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                      D  T  S  G  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11682  271  ATACTAGTGGTTATTCGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.5% (21/22)    IGHD3-22*01  12   ...G...........------------------------------------------  26
J  97.5% (39/40)    IGHJ4*02     9    -----------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_98558

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           357     1e-100
IGHD2-15*01                                                                                           12.2    31    
IGHJ1*01                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAACAGGGG	GGTGGT	N/A	TTCCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAACAGGGGGGTGGTTTCCACCAC	AKDKQGGGFHH	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  P  P  G  K  G  P  
                    Query_11683  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCCGG  90
V  95.6% (239/250)  IGHV3-30*18  47   .......................................................................G...............T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  L  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11683  91   AGTCGCTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.6% (239/250)  IGHV3-30*18  137  ...G.G....................................................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  S  G  L  R  S  D  D  T  A  V  Y  Y  C  A  K  D  K  Q  G  G  G  F  
                    Query_11683  181  AGAACACGCTGTTTCTGCAAATGAGCGGCCTGAGAAGTGACGACACGGCTGTTTATTACTGTGCGAAAGATAAACAGGGGGGTGGTTTCC  270
V  95.6% (239/250)  IGHV3-30*18  227  ............A...........A.A........GC...G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-15*01  14   --------------------------------------------------------------------------------......----  19
J  95.3% (41/43)    IGHJ1*01     10   --------------------------------------------------------------------------------------....  13

                                      ---->                                  
                                      H  H  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_11683  271  ACCACTGGGGCCAGGGCACCCTGGTCATCGTCTCCTCAG  309
J  95.3% (41/43)    IGHJ1*01     14   .G.........................C...........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_62980

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           339     2e-95
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCGGACGAATA	ACTATGGTCCGGGGAGT	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGACATCGGACGAATAACTATGGTCCGGGGAGTCCCTTTGACTAC	SRHRTNNYGPGSPFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	234	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  S  T  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_11684  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTAGCACTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  93.2% (234/251)  IGHV4-39*01  49   ...............................G...............T.G...........G...........................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  P  G  G  S  T  Q  Y  I  P  S  L  K  S  R  L  T  M  S  V  D  S  S 
                    Query_11684  91   CTGGAGTGGATTGGGAGTATCTATCCTGGTGGGAGCACCCAGTACATCCCGTCCCTCAAGAGTCGACTCACCATGTCCGTAGACTCGTCC  180
V  93.2% (234/251)  IGHV4-39*01  139  ........................TA.A...........T.C....A...................G.......A.........A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  R  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  S  R  H  R  T  N  N  Y  G 
                    Query_11684  181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGAGCGCCGCAGACACGGCTGTGTATTACTGTTCGAGACATCGGACGAATAACTATGGT  270
V  93.2% (234/251)  IGHV4-39*01  229  ...................A..............C............................G.......-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.1% (16/17)    IGHD3-10*01  6    ----------------------------------------------------------------------------------........  13

                                      GT------------------>                                  
                                       P  G  S  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11684  271  CCGGGGAGTCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  94.1% (16/17)    IGHD3-10*01  14   T........----------------------------------------------  22
J  100.0% (44/44)   IGHJ4*02     5    -----------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_30444

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           414     5e-118
IGHD6-19*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCCTTAGGGTC	TATAGCAGTGGCTGGTAC	TC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCCTTAGGGTCTATAGCAGTGGCTGGTACTCTTGGCTAC	ARVPLGSIAVAGTLGY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  L  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_11685  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCTTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAATTAT  91
V  95.8% (277/289)  IGHV1-18*01  7    ..................................C..................................................GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  V  F  N  G  N  T  R  H  A  L 
                    Query_11685  92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCAGCGTTTTCAATGGTAACACAAGACATGCACTG  181
V  95.8% (277/289)  IGHV1-18*01  97   ........C.........................................A..........C..A..............ACT......A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  N  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_11685  182  AAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAACACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.8% (277/289)  IGHV1-18*01  187  ...........................................G..............................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  V  P  L  G  S  I  A  V  A  G  T  L  G  Y  W  G  Q  G  T  L  V  I  V  S 
                    Query_11685  272  GTGTATTACTGTGCGAGAGTTCCCTTAGGGTCTATAGCAGTGGCTGGTACTCTTGGCTACTGGGGCCAGGGAACCCTGGTCATTGTCTCC  361
V  95.8% (277/289)  IGHV1-18*01  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (18/18)   IGHD6-19*01  4    --------------------------------..................----------------------------------------  21
J  92.9% (39/42)    IGHJ4*02     7    ----------------------------------------------------...A..........................CC......  44

                                          
                                       S  
                    Query_11685  362  TCAG  365
J  92.9% (39/42)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_180839

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           341     6e-96
IGHD3-22*01                                                                                           19.9    0.17 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACGGTAAAGGG	GGTTATTACT	GT	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACGGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTACGGACGTC	ARTVKGVITVYQYFATDV	261	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	22	2	0	91.7
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	20	1	0	95.2
FR3-IMGT	147	260	114	98	16	0	86
CDR3-IMGT (germline)	261	266	6	6	0	0	100
Total	N/A	N/A	266	242	24	0	91


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  
                    Query_11686  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCC  90
V  91.0% (242/266)  IGHV4-34*01  26   ........T.......T......................................G...T..................G...........  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  R  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  
                    Query_11686  91   AGCGCCCAGGGAAGGGACTGGAGTGGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGAGTCTCCA  180
V  91.0% (242/266)  IGHV4-34*01  116  ...C............G...................................C..................C..A...........A...  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  L  D  M  S  K  N  Q  I  S  V  R  V  T  P  V  T  A  A  D  T  A  T  Y  Y  C  A  R  T  
                    Query_11686  181  TATCATTAGACATGTCCAAGAATCAGATCTCCGTGAGGGTGACGCCTGTGACCGCCGCGGACACGGCTACTTATTACTGTGCGAGAACGG  270
V  91.0% (242/266)  IGHV4-34*01  206  .....G......C.........C...T.....C...A.C...GCT.......................GTG...............----  291
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -------------CDR3-IMGT--------------------->                                 
                                      V  K  G  V  I  T  V  Y  Q  Y  F  A  T  D  V  W  G  Q  G  T  T  V  T  V  P  S 
                    Query_11686  271  TAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTACGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCCCCTCA  347
D  100.0% (10/10)   IGHD3-22*01  20   -------..........------------------------------------------------------------  29
J  89.7% (52/58)    IGHJ6*02     5    -------------------....T.C....A..G..T..................................T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_319674

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           363     2e-102
IGHD3-3*01                                                                                            27.6    9e-04 
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGGTTGCATCGAT	TTACGATTTTTCGAGTG	ATTCCGGCT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGTTGCATCGATTTACGATTTTTCGAGTGATTCCGGCTTGGACGTC	ARRVASIYDFSSDSGLDV	292	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	69	5	0	93.2
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	45	6	0	88.2
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	101	13	0	88.6
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	294	263	31	0	89.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  T  K  S  G  E  S  L  R  I  S  C  K  A  S  G  Y  I  F  S  
                    Query_11687  5    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGACAAAGTCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCTTCTGGATACATCTTTTCCA  94
V  89.5% (263/294)  IGHV5-51*01  2    ....G............................A....C...............A..............G...........G....A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  V  V  Y  P  G  D  S  K  T  R  Y  
                    Query_11687  95   CCTATTGGATCGCCTGGGTGCGCCAGGCGCCCGGGAAAGGCCTAGAGTGGATGGGAGTCGTCTATCCTGGTGACTCTAAGACCAGATACA  184
V  89.5% (263/294)  IGHV5-51*01  92   G...C.......G.............AT...............G...........GA..A.................G.T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  L  S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  N  T  A  Y  L  Q  W  K  G  L  K  V  S  D  
                    Query_11687  185  GTCTGTCCTTCCAAGGTCAGGTCACCATCTCAGCCGACAGGTCCATCAACACCGCCTATTTACAGTGGAAGGGCCTGAAGGTCTCGGACA  274
V  89.5% (263/294)  IGHV5-51*01  182  .C.C............C......................A........G.........CC.G.......GCA.........C........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------------CDR3-IMGT--------------------->                   
                                      T  A  I  Y  Y  C  A  R  R  V  A  S  I  Y  D  F  S  S  D  S  G  L  D  V  W  G  Q  G  T  T  
                    Query_11687  275  CCGCCATATATTACTGTGCGAGACGGGTTGCATCGATTTACGATTTTTCGAGTGATTCCGGCTTGGACGTCTGGGGCCAAGGGACCACGG  364
V  89.5% (263/294)  IGHV5-51*01  272  .......G................------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  94.1% (16/17)    IGHD3-3*01   4    -------------------------------------...........G.....------------------------------------  20
J  100.0% (41/41)   IGHJ6*02     22   ---------------------------------------------------------------...........................  48

                                                    
                                      V  T  V  S  S 
                    Query_11687  365  TCACCGTCTCCTCA  378
J  100.0% (41/41)   IGHJ6*02     49   ..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_291018

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           324     8e-91
IGHD1-7*01                                                                                            14.1    8.5  
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCAGTTT	GAACTAC	GGCCTTGGTGCAG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCAGTTTGAACTACGGCCTTGGTGCAGTTTTGATATT	ARHQFELRPWCSFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	229	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  N  Y  Y  W  G  W  I  S  Q  P  P  G  K  G 
                    Query_11688  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAATTACTACTGGGGATGGATCAGCCAGCCCCCAGGGAAGGGA  90
V  91.2% (229/251)  IGHV4-39*01  49   .............................................A...G............C......C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  T  G  L  T  Y  Y  T  P  S  L  E  S  P  P  T  I  S  V  D  T  S 
                    Query_11688  91   CTGGAGTGGATTGGGAGCATCTATTATACTGGGCTCACCTACTACACCCCGTCCCTCGAGAGTCCACCCACCATATCCGTGGACACGTCC  180
V  91.2% (229/251)  IGHV4-39*01  139  .................T..........G....AG...........A..........A......G.GT............A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  Q  F  S  L  S  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Q  F  E  L  R  P 
                    Query_11688  181  AGAAACCAGTTCTCCCTGAGCCTCAGCTCTGTGACCGCCGCAGATACGGCTGTATATTACTGTGCGAGACATCAGTTTGAACTACGGCCT  270
V  91.2% (229/251)  IGHV4-39*01  229  .AG................AG..G....................C........G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD1-7*01   11   ------------------------------------------------------------------------------.......-----  17

                                      ----------------->                                  
                                       W  C  S  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11688  271  TGGTGCAGTTTTGATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  97.7% (43/44)    IGHJ3*02     7    --------.........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_291019

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11689  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_11689  91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_11689  181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_11689  271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_34588

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           361     4e-102
IGHD3-22*01                                                                                           48.8    3e-10 
IGHJ2*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGAC	GTATTACTATGATAGTAGTGGTTAT	GCCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGACGTATTACTATGATAGTAGTGGTTATGCCCACTGGCACTTCGATCTC	ARATYYYDSSGYAHWHFDL	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  V  T  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11690  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCGTCACTAGTTATGAAATGAACTGGGTCCGGCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-48*03  47   ....................................C.T...G........................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  S  S  G  S  T  T  Y  Y  G  D  S  V  K  G  R  V  T  I  S  R  D  N  A  
                    Query_11690  91   AGTGGGTGTCACACATTAGTAGTAGTGGTAGTACCACATACTACGGAGACTCTGTGAAGGGCCGAGTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (240/249)  IGHV3-48*03  137  .......T...T........................T........C...................T........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  T  Y  Y  Y  D  S  
                    Query_11690  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGCGACGTATTACTATGATAGTA  270
V  96.4% (240/249)  IGHV3-48*03  227  .....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (25/25)   IGHD3-22*01  1    -------------------------------------------------------------------------.................  17

                                      -IMGT----------------------->                                  
                                      S  G  Y  A  H  W  H  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11690  271  GTGGTTATGCCCACTGGCACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  333
D  100.0% (25/25)   IGHD3-22*01  18   ........-------------------------------------------------------  25
J  98.0% (50/51)    IGHJ2*01     3    ------------.....T.............................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_34589

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70D*04                                                                                          296     2e-82
IGHD3-3*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70D*04	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TTCGAGTC	GGAGTGG	AGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTCGAGTCGGAGTGGAGTTCTACTTTGAAAAC	VRVGVEFYFEN	263	295	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	43	3	0	93.5
CDR1-IMGT	47	76	30	24	6	0	80
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	148	21	16	5	0	76.2
FR3-IMGT	149	262	114	94	20	0	82.5
CDR3-IMGT (germline)	263	263	1	1	0	0	100
Total	N/A	N/A	263	226	37	0	85.9


Alignments

                                       <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                         L  V  K  P  T  Q  T  L  K  V  T  C  A  F  S  G  F  S  L  N  S  G  G  L  R  V  A  W  I  R
                    Query_11691   1    GCTGGTGAAACCCACACAGACCCTCAAAGTGACCTGCGCCTTCTCTGGATTCTCACTCAACTCTGGTGGACTCCGTGTGGCCTGGATCCG  90
V  85.9% (226/263)  IGHV2-70D*04  30   ..........................C.C........A..........G..........G.A..A.....A.G......AG.........  119
                                         L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  R  V  S  W  I  R

                                       -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                         Q  P  P  G  K  A  L  E  W  L  A  R  I  D  W  N  D  K  K  F  Y  T  P  S  L  K  T  R  L  T
                    Query_11691   91   TCAGCCCCCCGGGAAGGCCCTGGAGTGGCTTGCACGCATCGATTGGAATGATAAAAAGTTTTACACTCCCTCTCTGAAGACCAGGCTGAC  180
V  85.9% (226/263)  IGHV2-70D*04  120  .........A.............................T......G.....G.T..A..C....GCA.A.................C..  209
                                         Q  P  P  G  K  A  L  E  W  L  A  R  I  D  W  D  D  D  K  F  Y  S  T  S  L  K  T  R  L  T

                                       ---------------------FR3-IMGT----------------------------------------------------><-------
                                         V  S  K  D  T  S  R  D  Q  V  V  L  T  L  T  N  V  D  P  G  D  T  A  T  Y  F  C  V  R  V
                    Query_11691   181  CGTCTCCAAGGACACCTCCAGGGATCAGGTGGTCCTGACACTGACCAACGTCGACCCCGGGGACACAGCCACCTATTTTTGTGTTCGAGT  270
V  85.9% (226/263)  IGHV2-70D*04  210  .A..................AAA.C...........T...A........A.G.....T.T............G....AC....-------  292
                                         I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C         

                                       ----CDR3-IMGT----------->                                  
                                         G  V  E  F  Y  F  E  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11691   271  CGGAGTGGAGTTCTACTTTGAAAACTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  329
D  100.0% (7/7)     IGHD3-3*01    15   -.......---------------------------------------------------  21
J  93.6% (44/47)    IGHJ4*02      2    ------------.........CT.........................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_34580

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           321     7e-90
IGHD2-15*01                                                                                           12.2    32   
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	CGACATTC	AGTGGT	CCCTATTCTTTAGTG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGCGACATTCAGTGGTCCCTATTCTTTAGTGGACTAC	TTATFSGPYSLVDY	248	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	28	25	23	2	0	92
CDR1-IMGT	29	52	24	18	6	0	75
FR2-IMGT	53	103	51	51	0	0	100
CDR2-IMGT	104	133	30	27	3	0	90
FR3-IMGT	134	247	114	102	12	0	89.5
CDR3-IMGT (germline)	248	254	7	7	0	0	100
Total	N/A	N/A	251	228	23	0	90.8


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        L  R  L  S  C  T  A  S  Q  F  N  F  N  D  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W
                    Query_11692  4    CCTGAGACTCTCCTGTACAGCCTCTCAATTCAATTTCAACGACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTG  93
V  90.8% (228/251)  IGHV3-15*01  51   ...T............G........GG.....C.....GTA.................................................  140
                                        L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W

                                      ---------><----------CDR2-IMGT---------><-------------------------------------------------
                                        V  G  R  L  K  G  K  A  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  I  I  S  R  D  D  S
                    Query_11692  94   GGTTGGCCGTCTTAAAGGCAAAGCTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCATCATCTCAAGAGATGATTC  183
V  90.8% (228/251)  IGHV3-15*01  141  ..........A.....A.....A................................................C..................  230
                                        V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D  S

                                      ---FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT
                                        Q  N  V  L  Y  L  Q  M  K  S  L  K  T  E  D  T  A  I  Y  Y  C  T  T  A  T  F  S  G  P  Y
                    Query_11692  184  ACAAAATGTGTTGTATCTGCAAATGAAGAGCCTAAAAACCGAGGACACAGCCATTTATTATTGCACCACAGCGACATTCAGTGGTCCCTA  273
V  90.8% (228/251)  IGHV3-15*01  231  .A....CAC.C................C.....G..................G.G.....C..T.......-------------------  301
                                        K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                     
D  100.0% (6/6)     IGHD2-15*01  11   -------------------------------------------------------------------------------......-----  16

                                      --------------->                                  
                                        S  L  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11692  274  TTCTTTAGTGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  323
J  100.0% (40/40)   IGHJ4*02     9    ----------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_255110

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           244     7e-67
IGHD4-17*01                                                                                           18.0    0.63 
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CCGAAATGCGAACCCAGAC	GACTACAATGACTAC	GGAAACGGCTTCTATTTT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCCGAAATGCGAACCCAGACGACTACAATGACTACGGAAACGGCTTCTATTTTTACGGCATGGACGTC	ARNANPDDYNDYGNGFYFYGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	87	27	0	76.3
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	200	44	0	82


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  V  S  G  F  T  F  R  S  H  G  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_11693  1    GGTCCCTGAGACTCTCCTGTGAAGTCTCTGGATTCACATTCCGTTCCCACGGCATGCATTGGGTCCGTCAGGTGCCAGGCAAGGGGCTGG  90
V  82.0% (200/244)  IGHV3-30*03  47   .....................C..C............C...A..AG.T.T........C........C....CT................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  G  K  E  Y  Y  A  E  S  V  K  G  R  F  I  V  S  R  D  N  S  
                    Query_11693  91   AGTGGGTGGCAGTTATTTCGTATGATGGAGGTAAGGAATATTACGCAGAGTCTGTTAAGGGCCGCTTCATCGTCTCCAGAGACAATTCTA  180
V  82.0% (200/244)  IGHV3-30*03  137  ................A..A.........A....TA....C..T.....C..C..G........A....C.A................C.  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  D  I  L  Y  L  Q  M  N  G  L  K  L  G  D  T  A  I  Y  Y  C  A  R  N  A  N  P  D  D  Y  
                    Query_11693  181  AGGATATCCTATATCTTCAAATGAATGGCCTGAAACTCGGAGACACGGCCATTTATTATTGTGCCCGAAATGCGAACCCAGACGACTACA  270
V  82.0% (200/244)  IGHV3-30*03  227  ..A.C.CG..G.....G........CA......G.GCT.AG........TG.G.....C.....--------------------------  290
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  86.7% (13/15)    IGHD4-17*01  2    -----------------------------------------------------------------------------------......G  8

                                      --CDR3-IMGT----------------------------->                             
                                      N  D  Y  G  N  G  F  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V  A  V  S
                    Query_11693  271  ATGACTACGGAAACGGCTTCTATTTTTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTC  340
D  86.7% (13/15)    IGHD4-17*01  9    G.......--------------------------------------------------------------  16
J  95.5% (42/44)    IGHJ6*02     15   --------------------------.....T..............................A.......  58


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_34582

Length=433
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           322     3e-90
IGHD6-13*01                                                                                           31.5    7e-05
IGHJ6*02                                                                                              79.5    5e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCCATCCCGAGGAGG	TAGCAGCAGCTGGTAC	CGAAAGGGGC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCCATCCCGAGGAGGTAGCAGCAGCTGGTACCGAAAGGGGCACTTCTACGCAATGGATGTC	ASPSRGGSSSWYRKGHFYAMDV	312	377	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	71	4	0	94.7
CDR1-IMGT	78	122	45	20	4	21	44.4
FR2-IMGT	123	173	51	47	4	0	92.2
CDR2-IMGT	174	197	24	16	8	0	66.7
FR3-IMGT	198	311	114	103	11	0	90.4
CDR3-IMGT (germline)	312	316	5	5	0	0	100
Total	N/A	N/A	314	262	31	21	83.4


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><--------------
                                       Q  V  Q  L  V  Q  S  G  A  E  V  T  K  P  G  S  S  V  K  I  S  C  K  S  S  G  G  T  F  R 
                    Query_11694  3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGACGAAGCCTGGGTCCTCGGTGAAGATCTCCTGCAAGTCTTCTGGAGGCACCTTCAGG  92
V  83.4% (262/314)  IGHV1-69*01  1    .......................G..........A......................G...........G...................C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      ---CDR1-IMGT-----------------><--------------------FR2-IMGT---------------------><-------C
                                       S  S  G  Y  T  F  G  T  Y  A  M  T  W  V  R  Q  A  P  G  Q  G  L  E  W  I  G  G  I  I  A 
                    Query_11694  93   TCTTCTGGATACACCTTCGGAACTTATGCCATGACCTGGGTGCGACAGGCCCCTGGACAAGGGCTCGAGTGGATAGGAGGGATCATCGCC  182
V  83.4% (262/314)  IGHV1-69*01  91   ---------------------.GC.....T..C.G..............................T........G............C.T  159
                                                            S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P 

                                      DR2-IMGT------><----------------------------------------------------FR3-IMGT--------------
                                       I  A  G  I  I  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  A  S  T  G  Y  L  E  V 
                    Query_11694  183  ATCGCTGGTATAATCAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCGGCGAGTACAGGCTACTTGGAGGTG  272
V  83.4% (262/314)  IGHV1-69*01  160  ...TT.....C.GCA..................................................CA....C....C....A.....C..  249
                                       I  F  G  T  A  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L 

                                      --------------------------------------><----------------------------CDR3-IMGT-------------
                                       S  S  L  N  S  E  D  T  A  V  Y  Y  C  A  S  P  S  R  G  G  S  S  S  W  Y  R  K  G  H  F 
                    Query_11694  273  AGCAGTCTCAACTCTGAGGACACGGCCGTCTATTACTGTGCGAGCCCATCCCGAGGAGGTAGCAGCAGCTGGTACCGAAAGGGGCACTTC  362
V  83.4% (262/314)  IGHV1-69*01  250  .....C..G.GA.................G..............----------------------------------------------  293
                                       S  S  L  R  S  E  D  T  A  V  Y  Y  C  A                                                 
D  100.0% (16/16)   IGHD6-13*01  6    -----------------------------------------------------------................---------------  21
J  92.5% (49/53)    IGHJ6*02     10   -------------------------------------------------------------------------------------...A.  14

                                      -------------->                                 
                                       Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11694  363  TACGCAATGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  410
J  92.5% (49/53)    IGHJ6*02     15   ....GT.....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 42602760


Query= Query_34583

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           377     1e-106
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCAAC	GGGTATAGAAGTGGC	AGATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAACGGGTATAGAAGTGGCAGATAACTACTACTATGGTTTGGACGTC	AATGIEVADNYYYGLDV	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	72	3	0	96
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	19	5	0	79.2
FR3-IMGT	176	289	114	103	11	0	90.4
CDR3-IMGT (germline)	290	292	3	3	0	0	100
Total	N/A	N/A	291	266	25	0	91.4


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  T  C  A  A  S  G  F  T  F  R 
                    Query_11695  2    CAGGTGCAGCTGGTGCAGTCTGGAGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCACCTGTGCAGCCTCTGGATTCACCTTCAGA  91
V  91.4% (266/291)  IGHV3-30*03  1    ...............G.......G....................................T............................T  90
                                       Q  V  Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  H  G  M  Q  W  V  R  Q  A  P  G  K  G  L  E  W  L  A  V  I  S  F  N  G  S  H  T  Y  Y 
                    Query_11695  92   AGTCATGGCATGCAGTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAATGGTTGGCAGTTATCTCATTTAATGGAAGTCATACATACTAT  181
V  91.4% (266/291)  IGHV3-30*03  91   ..CT..........C................................G...G..........A....A.G........A...A.......  180
                                       S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  K  N  A  L  Y  L  Q  M  A  S  L  R  S  A  D 
                    Query_11695  182  GCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCAAGAACGCACTGTATCTGCAAATGGCCAGCCTGAGATCTGCGGAC  271
V  91.4% (266/291)  IGHV3-30*03  181  ....................A......A.......................A.G...............AA..........G...A....  270
                                       A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D 

                                      -----------------><--------------------CDR3-IMGT-------------------->                     
                                       T  A  V  Y  F  C  A  A  T  G  I  E  V  A  D  N  Y  Y  Y  G  L  D  V  W  G  H  G  T  T  V 
                    Query_11695  272  ACGGCTGTTTACTTCTGTGCGGCAACGGGTATAGAAGTGGCAGATAACTACTACTATGGTTTGGACGTCTGGGGCCACGGGACCACGGTC  361
V  91.4% (266/291)  IGHV3-30*03  271  ........G..T.A.......---------------------------------------------------------------------  291
                                       T  A  V  Y  Y  C  A                                                                      
D  93.3% (14/15)    IGHD6-19*01  1    --------------------------........C......-------------------------------------------------  15
J  94.6% (53/56)    IGHJ6*02     7    ----------------------------------------------..........C...A................A............  50

                                                  
                                       T  V  S  S 
                    Query_11695  362  ACCGTCTCCTCA  373
J  94.6% (53/56)    IGHJ6*02     51   ............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_255115

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     9e-100
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATCGTGGTG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATCGTGGTGACTACTTTGACCAC	ARGLHYYDRGDYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  R  V  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11696  1    ACCCTGTCCCTCACCTGCACTGTCTCTCGTGTCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.2% (238/250)  IGHV4-31*03  49   ...........................G...G...................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_11696  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAATAAGTCCCTCAAGAGTCGAATTACCATATCGGTAGACACGTCT  180
V  95.2% (238/250)  IGHV4-31*03  139  ..................................G............CCC................G..........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R 
                    Query_11696  181  AAGAACCAGTTCTCCCTGACGCTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCCATTACTATGATCGT  270
V  95.2% (238/250)  IGHV4-31*03  229  ...................A.....G...........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (16/18)    IGHD3-22*01  3    ----------------------------------------------------------------------------...........A..  16

                                      ----------------->                                  
                                       G  D  Y  F  D  H  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_11696  271  GGTGACTACTTTGACCACTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  322
D  88.9% (16/18)    IGHD3-22*01  17   A...------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    ----...........T....................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_34585

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           338     5e-95
IGHD1-26*01                                                                                           25.7    0.003
IGHJ1*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD1-26*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	ATC	GTATAGTGGAAGCTAC	AGGTT	CTTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAATCGTATAGTGGAAGCTACAGGTTCTTCCAACAC	AKESYSGSYRFFQH	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  G  Y  A  I  H  W  V  R  R  A  P  G  K  G  L  
                    Query_11697  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAATGGCTATGCCATACACTGGGTCCGCCGGGCTCCAGGCAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-30*18  47   .........................C................G.A......G...G.............A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  V  I  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11697  91   AGTGGGTGGCAGTTGTCATATATGATGGAAGTAACAAGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGGGACAATTCCA  180
V  93.2% (233/250)  IGHV3-30*18  137  ..............A.ATC...............T..A.........................................A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  I  Y  Y  C  A  K  E  S  Y  S  G  S  Y  
                    Query_11697  181  AGAACACGCTGTATCTGCAGATGAACAGCCTGAGAGTTGAGGACACGGCTATATATTACTGTGCGAAAGAATCGTATAGTGGAAGCTACA  270
V  93.2% (233/250)  IGHV3-30*18  227  ...................A................C.............G.G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD1-26*01  2    -------------------------------------------------------------------------.........G......-  17

                                      ------------->                                
                                      R  F  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11697  271  GGTTCTTCCAACACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTC  316
J  97.6% (41/42)    IGHJ1*01     9    ----......G...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_34586

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-13*01                                                                                           366     2e-103
IGHJ2*01                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-13*01	N/A	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	CCCCTTTAGGTG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCCCCTTTAGGTGACTGGTACTTCGATCTC	ARAPLGDWYFDL	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	240	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  D  I  H  W  V  R  Q  A  T  G  K  G  L  
                    Query_11698  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTCCTACGACATACACTGGGTCCGCCAAGCTACAGGAAAAGGTCTGG  90
V  97.6% (240/246)  IGHV3-13*01  47   ............................................AG.........G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  D  M  H  W  V  R  Q  A  T  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  A  T  A  G  D  T  Y  Y  P  G  S  V  K  G  R  F  T  I  S  R  E  S  A  K  
                    Query_11698  91   AGTGGGTCTCAGCTATTGCTACTGCTGGTGACACATACTATCCAGGCTCCGTGAAGGGCCGATTCACCATCTCCAGAGAAAGTGCCAAGA  180
V  97.6% (240/246)  IGHV3-13*01  137  ..................G..............................................................A........  226
                                      E  W  V  S  A  I  G  T  A  G  D  T  Y  Y  P  G  S  V  K  G  R  F  T  I  S  R  E  N  A  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  S  L  Y  L  Q  I  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R  A  P  L  G  D  W  Y  F  
                    Query_11698  181  ACTCCTTGTATCTTCAAATAAACAGCCTGAGAGCCGGGGACACGGCTGTGTATTACTGTGCAAGAGCCCCTTTAGGTGACTGGTACTTCG  270
V  97.6% (240/246)  IGHV3-13*01  227  ...................G..............................................------------------------  292
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  G  D  T  A  V  Y  Y  C  A  R                          
J  98.0% (50/51)    IGHJ2*01     3    ------------------------------------------------------------------------------............  14

                                      ---->                                  
                                      D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11698  271  ATCTCTGGGGCCGTGGCACCCTGGTCACAGTCTCCTCAG  309
J  98.0% (50/51)    IGHJ2*01     15   ............................T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_255116

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         319     2e-89
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	GGAGTCGTAATTAT	CATGGGAATT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGAGTCGTAATTATCATGGGAATTACTACTTTGACCAG	ARGSRNYHGNYYFDQ	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  A  Y  Y  S  L  N  W  I  R  R  T  P  L  K  G 
                    Query_11699    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGACAGTGCTTATTACTCCTTGAACTGGATCCGGCGGACACCACTGAAGGGC  90
V  90.8% (227/250)  IGHV4-30-2*01  49   ..................G....................AG.....G.GG........G..G...........A.C.....GG.......  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  G  G  A  T  Y  Y  N  P  S  L  E  S  R  V  T  L  S  V  D  R  S 
                    Query_11699    91   CTGGAGTGGATTGGCTACATCTATCATGGTGGGGCCACCTACTACAACCCGTCCCTCGAGAGTCGAGTCACCCTCTCAGTAGACCGGTCC  180
V  90.8% (227/250)  IGHV4-30-2*01  139  ..............G............A.....AG......................A..............A.A.........A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  R  N  Y  H  G 
                    Query_11699    181  AAGAACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGAGGGAGTCGTAATTATCATGGG  270
V  90.8% (227/250)  IGHV4-30-2*01  229  ...................A......C..........................G................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  85.7% (12/14)    IGHD3-3*01     15   ----------------------------------------------------------------------.....G..T.....------  28

                                        ----------------->                                  
                                         N  Y  Y  F  D  Q  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_11699    271  AATTACTACTTTGACCAGTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTCAG  322
J  91.7% (44/48)    IGHJ4*02       1    ----...........T.C.............C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_254248

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         357     1e-100
IGHD3-10*01                                                                                           10.3    115   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GA	GGGGA	CAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAGGGGACATTATGGACGTC	ARGGDIMDV	244	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_11700    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  95.6% (239/250)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  H  S  G  L  G  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  R  S 
                    Query_11700    91   CTGGAGTGGATTGGATACATCCATCATAGTGGGCTCGGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACAGGTCC  180
V  95.6% (239/250)  IGHV4-30-2*01  139  ..............G......T...........AG.AC.T...A......................G.......................  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                         K  N  Q  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  D  I  M  D  V 
                    Query_11700    181  AAGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAGGGGACATTATGGACGTC  270
V  95.6% (239/250)  IGHV4-30-2*01  229  ...........C.......A..................................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01    16   ------------------------------------------------------------------------.....-------------  20
J  100.0% (43/43)   IGHJ6*02       20   --------------------------------------------------------------------------------..........  29

                                                                         
                                         W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11700    271  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  303
J  100.0% (43/43)   IGHJ6*02       30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_254249

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           346     2e-97
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATGG	GGTTCGAGGA	CACTCGACCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTTCGAGGACACTCGACCGTTTTTGATATC	ARDGVRGHSTVFDI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  N  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11701  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTAACTCTTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (232/243)  IGHV4-59*08  49   ........................................G....T...AC.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_11701  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTATAATCCCTCCCTTAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  95.5% (232/243)  IGHV4-59*08  139  ......................................C..C........C.....................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  V  R  G  H  S  T  V 
                    Query_11701  181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGATGGGGTTCGAGGACACTCGACCGTT  270
V  95.5% (232/243)  IGHV4-59*08  229  ....................C........C.......................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD3-10*01  11   --------------------------------------------------------------------......G...------------  20
J  90.9% (40/44)    IGHJ3*02     7    -----------------------------------------------------------------------------------------.  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  A  T  I  I  V  S  S  
                    Query_11701  271  TTTGATATCTGGGGCCAAGGGGCAACGATCATCGTCTCTTCAG  313
J  90.9% (40/44)    IGHJ3*02     8    .....................A...T.G...C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_101029

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           358     4e-101
IGHD2-21*02                                                                                           12.2    32    
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCCCCAGGAGGATTAG	GGTGAC	CACA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCCCCAGGAGGATTAGGGTGACCACATTTGACTAC	ARSPRRIRVTTFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  I  V  S  G  A  S  V  S  S  G  N  Y  C  W  S  W  I  R  Q  P  P  G  R  G 
                    Query_11702  1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGCCTCCGTCAGCAGTGGTAATTACTGCTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGA  90
V  96.0% (239/249)  IGHV4-61*01  49   ...................C...........G.................G.....A.............................A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  F  Y  H  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_11702  91   CTGGAGTGGATTGGGTATTTCTATCACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCC  180
V  96.0% (239/249)  IGHV4-61*01  139  ..................A.....T..............A..................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  S  P  R  R  I  R  V 
                    Query_11702  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCATGTATTACTGTGCGAGATCCCCCAGGAGGATTAGGGTG  270
V  96.0% (239/249)  IGHV4-61*01  229  ...................................................G.................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-21*02  14   --------------------------------------------------------------------------------------....  17

                                      -------------->                                  
                                       T  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11702  271  ACCACATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
D  100.0% (6/6)     IGHD2-21*02  18   ..-----------------------------------------------  19
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_121339

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            311     4e-87
IGHD2-15*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCATTGTGGA	AGTGGTGG	CTGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCATTGTGGAAGTGGTGGCTGTTTCTACTTTGACATC	ARVHCGSGGCFYFDI	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	46	5	0	90.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	223	24	0	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  N  D  S  I  S  G  S  D  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_11703  1    ACCCTGTCCCTCACCTGCGCTGTCTCTAATGACTCCATCAGCGGTTCTGACTGGTGGACTTGGATCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.3% (223/247)  IGHV4-4*02   49   ...........................GG..G..........A..AG.A.........G....G..........................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  S  A  D  T  H  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  N  S  K 
                    Query_11703  91   GAGTGGATCGGAGAGATCCATCATAGTGCGGACACCCACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAACTCTAAG  180
V  90.3% (223/247)  IGHV4-4*02   139  ........T..G..A...T.........G.AG....A..............................................G..C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  E  L  R  S  V  T  A  A  D  A  A  L  Y  Y  C  A  R  V  H  C  G  S  G  G  C 
                    Query_11703  181  AACCAATTCTCCCTGGAGCTGAGGTCTGTGACCGCCGCGGACGCGGCCCTGTATTACTGTGCGAGAGTTCATTGTGGAAGTGGTGGCTGT  270
V  90.3% (223/247)  IGHV4-4*02   229  .....G.........A.......C..................A.....G..................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD2-15*01  11   ------------------------------------------------------------------------------........----  18

                                      -------------->                                  
                                       F  Y  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11703  271  TTCTACTTTGACATCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  95.7% (45/47)    IGHJ4*02     2    --..........TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_121338

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           349     3e-98
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAG	GACCCCCCC	ATTACTATGATA	CTGATGGTCCCTATGCGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAAAGGACCCCCCCATTACTATGATACTGATGGTCCCTATGCGAACTAC	VKGPPHYYDTDGPYANY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  L  R  F  S  I  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11704  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTACGCTTCAGTATCTATACTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  94.8% (236/249)  IGHV3-64*05  47   ..................................CAC........G....G.......................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  S  N  G  G  R  T  Y  Y  P  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11704  91   AATATGTTTCAGCTATTAGCAGTAATGGGGGTAGAACATACTACCCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (236/249)  IGHV3-64*05  137  ...................T..............C.........G.............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K  G  P  P  H  Y  Y  D  
                    Query_11704  181  AGAACACGCTGTATCTTCAAATGAACAGTCTGAGAGCTGAGGACACGGCTGTATATTATTGTGTCAAAGGACCCCCCCATTACTATGATA  270
V  94.8% (236/249)  IGHV3-64*05  227  ..............G.........G...........................G.....C.....G....---------------------  295
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (12/12)   IGHD3-22*01  3    ------------------------------------------------------------------------------............  14

                                      GT-------------------->                                 
                                      T  D  G  P  Y  A  N  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_11704  271  CTGATGGTCCCTATGCGAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  326
J  100.0% (38/38)   IGHJ4*02     10   ------------------......................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_101025

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           307     1e-85
IGHD3-10*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	AGACCAAGG	GGTTCGGGGACTTA	CTGCAGCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGACCAAGGGGTTCGGGGACTTACTGCAGCCCTTTGACCAC	VKTKGFGDLLQPFDH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	221	25	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  T  S  G  F  T  L  T  S  S  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11705  1    GGTCCCTGAGACTCTCCTGTGAAACCTCTGGATTCACCTTGACTAGTTCCACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.8% (221/246)  IGHV3-21*01  47   .....................C.G................C.G...C.AT.G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  T  S  G  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_11705  91   AGTGGGTCGCATCTATTACTAGTGGAAGTACTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  89.8% (221/246)  IGHV3-21*01  137  ........T....C....G....A.T....G........................................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  L  S  G  L  R  V  E  D  T  A  V  Y  S  C  V  K  T  K  G  F  G  D  L  
                    Query_11705  181  AGAACTCACTGTTTCTGCAACTGAGTGGCCTGAGAGTCGAGGACACGGCAGTCTATTCCTGTGTGAAGACCAAGGGGTTCGGGGACTTAC  270
V  89.8% (221/246)  IGHV3-21*01  227  ............A.......A...ACA.........C............T..G....A.....C..------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD3-10*01  11   ---------------------------------------------------------------------------..........G...-  24

                                      ---------------->                                  
                                      L  Q  P  F  D  H  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_11705  271  TGCAGCCCTTTGACCACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  321
J  95.5% (42/44)    IGHJ4*02     5    -------.......T.......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_121336

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_11706  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_11706  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_11706  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  A  A  V  S  V  S  S 
                    Query_11706  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGGCCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  89.6% (43/48)    IGHJ6*02     15   ------------------.....T.......T.............A..A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_101026

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_11707  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_11707  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_11707  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_11707  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_254246

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           305     3e-85
IGHD1-26*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGC	ATAGTGGGAGCTACT	TGT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGCATAGTGGGAGCTACTTGTACTTCTTTGACTAC	ARLHSGSYLYFFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	19	7	0	73.1
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	241	218	23	0	90.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  S  T  S  G  F  T  V  I  N  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_11708  2    CCCTGTCCCTCACCTGTTCGACCTCTGGATTCACCGTCATTAATAATTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  90.5% (218/241)  IGHV3-53*01  50   .....AGA...T.....G.AG.......G..........G..GC..C...........................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  V  S  A  I  Y  T  N  G  R  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  
                    Query_11708  92   GGGTCTCAGCCATTTATACCAATGGTCGCACATTCTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACA  181
V  90.5% (218/241)  IGHV3-53*01  140  .........TT.......G.GG....A......A........................A...............................  229
                                      W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      T  L  Y  L  E  M  N  S  L  R  A  A  D  T  A  V  Y  Y  C  A  R  L  H  S  G  S  Y  L  Y  F  
                    Query_11708  182  CGCTGTATCTTGAAATGAACAGCCTGAGAGCCGCGGACACGGCCGTGTATTATTGTGCGAGGCTGCATAGTGGGAGCTACTTGTACTTCT  271
V  90.5% (218/241)  IGHV3-53*01  230  ...........C.....................A..................C........-----------------------------  290
                                      T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                
D  100.0% (15/15)   IGHD1-26*01  4    ------------------------------------------------------------------...............---------  18
J  93.8% (45/48)    IGHJ4*02     1    ------------------------------------------------------------------------------------...A..  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11708  272  TTGACTACTGGGGCCAGGGGGCCCTGGTCACCGTCTCCTCAG  313
J  93.8% (45/48)    IGHJ4*02     7    ...................AA.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_101023

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            406     1e-115
IGHD6-19*01                                                                                           21.8    0.046 
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACC	GGGTGTAGCAATGGCTG	ATTTATC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAACCGGGTGTAGCAATGGCTGATTTATCCTATTACTACGGTCTGGACGTC	AREPGVAMADLSYYYGLDV	273	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	25	2	0	92.6
FR3-IMGT	159	272	114	110	4	0	96.5
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	280	270	10	0	96.4


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  I  S  R  N  T  D  A  W  N  W  
                    Query_11709  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTATCTCTCGCAACACTGATGCTTGGAACTGGA  90
V  96.4% (270/280)  IGHV6-1*01   26   ...........................................................G.....A......G..C..............  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  K  S  K  W  Y  Y  D  Y  A  V  S  V  K  
                    Query_11709  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAAGTCCAAGTGGTATTATGATTATGCAGTATCTGTGAAAA  180
V  96.4% (270/280)  IGHV6-1*01   116  ...................................................G.............A........................  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  H  L  S  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_11709  181  GTCGAATTACCATCAACCCCGACACATCCAAGAACCAGTTCTCCCTGCATCTGAGCTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  96.4% (270/280)  IGHV6-1*01   206  .......A...........A.............................G....A...................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-----------------------CDR3-IMGT----------------------->                               
                                      C  A  R  E  P  G  V  A  M  A  D  L  S  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  
                    Query_11709  271  GTGCAAGAGAACCGGGTGTAGCAATGGCTGATTTATCCTATTACTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCT  360
V  96.4% (270/280)  IGHV6-1*01   296  ..........--------------------------------------------------------------------------------  305
                                      C  A  R                                                                                   
D  88.2% (15/17)    IGHD6-19*01  1    -------------....A.....G......------------------------------------------------------------  17
J  96.4% (53/55)    IGHJ6*02     8    -------------------------------------...C.........A.......................................  60

                                        
                                      S 
                    Query_11709  361  CA  362
J  96.4% (53/55)    IGHJ6*02     61   ..  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_254245

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11710  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.2% (243/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11710  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTGGACACGTCT  180
V  97.2% (243/250)  IGHV4-31*03  139  ..................................G.............................................A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  R  A  R  G  H  S  Y  G  S  G 
                    Query_11710  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACCGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  97.2% (243/250)  IGHV4-31*03  229  ............................................................T.........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11710  271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_331740

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           386     1e-109
IGHD3-10*01                                                                                           23.8    0.011 
IGHJ1*01                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TAACGGCG	GGTTCGGGGAGT	N/A	CTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAACGGCGGGTTCGGGGAGTCTGAATACTTCCAGCAC	ARHNGGFGESEYFQH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	249	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_11711  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  99.2% (249/251)  IGHV4-39*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  C  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11711  91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACTGCCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  99.2% (249/251)  IGHV4-39*01  139  .............................................AA...........................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  N  G  G  F  G  E 
                    Query_11711  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATAACGGCGGGTTCGGGGAG  270
V  99.2% (249/251)  IGHV4-39*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD3-10*01  11   -------------------------------------------------------------------------------...........  21

                                      ----------------->                                  
                                       S  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11711  271  TCTGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (12/12)   IGHD3-10*01  22   .---------------------------------------------------  22
J  100.0% (51/51)   IGHJ1*01     2    -...................................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_282369

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           14.1    8.8  
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGTGGAGTAA	TGGCTGG	GGAACATACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGTGGAGTAATGGCTGGGGAACATACTATAATTACGGCATGGACGCC	ARGHRWSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	21	3	6	70
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  T  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_11712  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGCCCTTCACTGACAGTGGTTATTATTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T......T......------.......C..C....G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  I  D  T  S 
                    Query_11712  91   TTGGAGTGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAACCCGTCCCTCCAGAGTCGAGTCACCATATCAATAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  C..................T..A....AG.....G......................A....................G...........  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  W  S  N  G 
                    Query_11712  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTATATTATTGTGCGAGAGGCCACCGGTGGAGTAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C..................G.....C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  100.0% (7/7)     IGHD6-19*01  12   --------------------------------------------------------------------------------------....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_11712  271  TGGGGAACATACTATAATTACGGCATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  100.0% (7/7)     IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_282366

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           329     3e-92
IGHD5-18*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCGAGCGGATCGGCTAGAAC	ACACCTATGGT	GAAACGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCGAGCGGATCGGCTAGAACACACCTATGGTGAAACGTACTACTTTGACTCC	ARHRADRLEHTYGETYYFDS	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_11713  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAATAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.0% (227/244)  IGHV4-59*08  50   .....TCC...A....C......................G....T.............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  L  Y  Y  S  G  S  T  T  Y  N  P  S  L  E  G  R  A  T  I  S  A  D  T  S  K  N  
                    Query_11713  94   GGATTGGCTATCTCTATTACAGTGGGAGCACCACCTACAACCCCTCCCTCGAGGGTCGAGCCACCATATCAGCAGACACGTCCAAGAACC  183
V  93.0% (227/244)  IGHV4-59*08  140  .......G...A.....................A................A..A......T...........T.................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  R  A  D  R  L  E  H  T  
                    Query_11713  184  AGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCAGACACGGCCGTTTATTACTGTGCGAGACATCGAGCGGATCGGCTAGAACACACCT  273
V  93.0% (227/244)  IGHV4-59*08  230  ............A.....G...........................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  90.9% (10/11)    IGHD5-18*01  7    ------------------------------------------------------------------------------------...G..  12

                                      T------------------------>                                  
                                      Y  G  E  T  Y  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11713  274  ATGGTGAAACGTACTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  90.9% (10/11)    IGHD5-18*01  13   .....-------------------------------------------------------  17
J  97.9% (47/48)    IGHJ4*02     1    ------------............A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_282364

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           355     3e-100
IGHD3-9*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              62.2    6e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	CCGAG	TGACTGGTTATTATA	GCGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGCCGAGTGACTGGTTATTATAGCGGC	ASRVTGYYSG	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11714  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAACTACTGGATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (237/247)  IGHV3-74*01  47   .............................................G........................A...................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  Y  G  T  T  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11714  91   TGTGGGTCTCACGTATCAATAGTTATGGGACTACCACAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (237/247)  IGHV3-74*01  137  ................T......G......G..G.....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  R  V  T  G  Y  Y  S  
                    Query_11714  181  AGAACACGCTGTATCTGCAGATGAACAGTCTGAGAGCCGAGGACACGGCTGTATACTACTGTGCAAGCCGAGTGACTGGTTATTATAGCG  270
V  96.0% (237/247)  IGHV3-74*01  227  ...................A................................G..T...........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (15/15)   IGHD3-9*01   15   ------------------------------------------------------------------------...............---  29

                                      ->                                  
                                      G  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11714  271  GCTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  306
J  97.1% (34/35)    IGHJ4*02     14   -..................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_282365

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           360     1e-101
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CAC	TATTCCTATGGTTCGAGGAGT	GC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACACTATTCCTATGGTTCGAGGAGTGCTTGACTTT	AKDTIPMVRGVLDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  S  S  H  A  M  S  W  A  R  Q  A  P  G  K  G  L  
                    Query_11715  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTAGCAGCCATGCCATGAGCTGGGCCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-23*01  47   ................................T..............T...............T..........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11715  91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGGCACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  96.0% (240/250)  IGHV3-23*01  137  ...............................T.G...................................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  P  H  M  S  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  D  T  I  P  M  V  R  
                    Query_11715  181  AGAACACGCTGTATCCGCACATGAGCAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGACACTATTCCTATGGTTCGAG  270
V  96.0% (240/250)  IGHV3-23*01  227  ...............T...A....A.........................G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.5% (19/21)    IGHD3-10*01  2    -------------------------------------------------------------------------....A..........G.  18

                                      ------------->                                  
                                      G  V  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11715  271  GAGTGCTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  90.5% (19/21)    IGHD3-10*01  19   ....--------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    ------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_282362

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         396     2e-112
IGHD2-21*02                                                                                           19.9    0.17  
IGHJ4*02                                                                                              56.4    4e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ATCGGGTCGAC	TGTGGCGGTGACT	ACTCTCCCCGACGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAATCGGGTCGACTGTGGCGGTGACTACTCTCCCCGACGGC	ARIGSTVAVTTLPDG	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	271	18	0	93.8


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  L  G  S  G  Y  N  F  T  N  Y
                    Query_11716    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTTTGGGTTCTGGATACAACTTTACCAACTA  90
V  93.8% (271/289)  IGHV5-10-1*01  6    .............................................................AA..............G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  N  W  V  R  Q  I  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  F  Y  T  N  Y  S  P
                    Query_11716    91   CTGGATCAATTGGGTGCGCCAGATTCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTTTTACACCAACTACAGTCC  180
V  93.8% (271/289)  IGHV5-10-1*01  96   ........GC..............G..............................................C...T...........C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  S  S  L  G  A  S  D  P  A
                    Query_11716    181  GTCCTTCCAAGGCCACGTCACCATTTCAGCTGACACGTCCATCAGCACTGCCTACCTCCAGTGGAGCAGCCTGGGGGCCTCGGACCCCGC  270
V  93.8% (271/289)  IGHV5-10-1*01  186  ........................C..........A.....................G...............AA..........A....  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          I  Y  Y  C  A  R  I  G  S  T  V  A  V  T  T  L  P  D  G  W  G  Q  G  T  M  V  I  V  S  S
                    Query_11716    271  CATATATTACTGTGCGCGAATCGGGTCGACTGTGGCGGTGACTACTCTCCCCGACGGCTGGGGCCAGGGAACCATGGTCATCGTCTCCTC  360
V  93.8% (271/289)  IGHV5-10-1*01  276  ...G............A..-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  92.3% (12/13)    IGHD2-21*02    8    ------------------------------.....T.......-----------------------------------------------  20
J  94.3% (33/35)    IGHJ4*02       14   ---------------------------------------------------------................C......C.........  46

                                          
                                          
                    Query_11716    361  AG  362
J  94.3% (33/35)    IGHJ4*02       47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_282363

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*05                                                                                         294     6e-82
IGHD3-10*01                                                                                           12.2    31   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*05	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	TGGTTC	TACGTGGCG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGTGGTTCTACGTGGCGACAACTGGTTCGACCTC	VRVVLRGDNWFDL	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  D  S  I  T  R  G  G  Y  S  W  S  W  I  R  Q  S  P  G  K  G 
                    Query_11717    1    ACCCTGTCCCTCACCTGCGCTGTGTCCGGTGACTCCATCACCAGGGGTGGTTACTCCTGGAGTTGGATCCGCCAGTCCCCAGGGAAGGGC  90
V  87.6% (219/250)  IGHV4-30-2*05  49   .......................C..T....G........G...T.................C........G...C.A............  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  A  N  I  Y  Y  S  G  K  T  N  F  N  P  S  L  K  S  R  L  T  I  S  L  D  A  S 
                    Query_11717    91   CTGGAGTGGATTGCGAACATCTATTATAGTGGGAAGACCAACTTCAATCCGTCCCTCAAGAGTCGACTTACCATATCACTAGACGCGTCC  180
V  87.6% (219/250)  IGHV4-30-2*05  139  .............G.T........C.........GC...T...A...C..................G...........G.....A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         E  N  Q  F  S  L  K  L  M  S  M  T  A  A  D  T  A  V  Y  Y  C  V  R  V  V  L  R  G  D  N 
                    Query_11717    181  GAGAACCAATTCTCTCTGAAACTTATGTCGATGACTGCCGCAGACACGGCCGTTTATTACTGTGTCAGAGTGGTTCTACGTGGCGACAAC  270
V  87.6% (219/250)  IGHV4-30-2*05  229  A.......G.....C.....G..G.GC..TG......................G..........C.....--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01    10   ----------------------------------------------------------------------......--------------  15
J  94.1% (48/51)    IGHJ5*02       1    -------------------------------------------------------------------------------------.....  5

                                        ----------->                                  
                                         W  F  D  L  W  G  Q  G  T  Q  V  A  V  S  S  
                    Query_11717    271  TGGTTCGACCTCTGGGGCCAGGGAACCCAGGTCGCCGTCTCCTCAG  316
J  94.1% (48/51)    IGHJ5*02       6    ..........C.................T....A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_282360

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           388     5e-110
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ1*01                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGAGTGGCCAC	AGCAGCAGCTGGT	GGACAT	CTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGAGTGGCCACAGCAGCAGCTGGTGGACATCTGAGTACTTCCAGGGG	ARMSGHSSSWWTSEYFQG	289	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	69	2	0	97.2
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	104	10	0	91.2
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  P  S  
                    Query_11718  5    TGCAGCTGGTGCAGTCTGGAGCAGAGCTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTCCCCAGCC  94
V  92.8% (269/290)  IGHV5-51*03  5    ..........................G....A..................................................TA.....T  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      H  W  I  G  W  V  R  Q  T  P  G  N  G  L  E  W  M  G  L  I  Y  P  D  D  S  D  T  R  Y  S  
                    Query_11718  95   ATTGGATCGGCTGGGTGCGCCAGACGCCCGGGAACGGCCTGGAGTGGATGGGACTCATCTATCCTGATGACTCTGATACCAGATACAGCC  184
V  92.8% (269/290)  IGHV5-51*03  95   .C......................T.........A.................GA............G.......................  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  K  G  Q  V  T  I  S  V  D  K  S  I  N  T  A  F  L  R  W  A  S  L  K  A  S  D  S  
                    Query_11718  185  CGTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAACACCGCCTTCCTGCGCTGGGCCAGCCTGAAGGCCTCGGACAGCG  274
V  92.8% (269/290)  IGHV5-51*03  185  ........C.....................C..............G........A.....AG...AG....................C..  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><----------------------CDR3-IMGT--------------------->                      
                                      G  M  Y  Y  C  A  R  M  S  G  H  S  S  S  W  W  T  S  E  Y  F  Q  G  W  G  Q  G  T  L  V  
                    Query_11718  275  GCATGTATTACTGTGCGAGAATGAGTGGCCACAGCAGCAGCTGGTGGACATCTGAGTACTTCCAGGGGTGGGGCCAGGGCACCCTGGTCT  364
V  92.8% (269/290)  IGHV5-51*03  275  C...................----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (13/13)   IGHD6-13*01  7    --------------------------------.............---------------------------------------------  19
J  90.2% (46/51)    IGHJ1*01     2    ---------------------------------------------------....A.........CAC.....................A  40

                                                  
                                      S  V  S  S  
                    Query_11718  365  CCGTCTCCTCAG  376
J  90.2% (46/51)    IGHJ1*01     41   ............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_282361

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            353     9e-100
IGHD2-8*02                                                                                            19.9    0.15  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AAAGCGGGCTC	TACTGGTGGT	A	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAAAGCGGGCTCTACTGGTGGTAACTTTGACTAC	ARKAGSTGGNFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  T  H  Y  W  M  S  W  V  R  Q  A  P  G  K  W  L  
                    Query_11719  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTTACTCACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGTGGCTGG  90
V  95.6% (237/248)  IGHV3-7*03   47   ....................................CC....G.AG.....................................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  D  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11719  91   AGTGGGTTGCCGACATAAAGCAGGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (237/248)  IGHV3-7*03   137  .......G...A..........A...................................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  K  A  G  S  T  G  G  
                    Query_11719  181  AGAACTCAGTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAAAAGCGGGCTCTACTGGTGGTA  270
V  95.6% (237/248)  IGHV3-7*03   227  ........C.G.........................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD2-8*02   10   -------------------------------------------------------------------------------..........-  19

                                      ---------->                                  
                                      N  F  D  Y  W  G  Q  G  T  L  V  T  A  S  S  
                    Query_11719  271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGCCTCCTCAG  315
J  97.8% (44/45)    IGHJ4*02     4    ....................................T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_53786

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     3e-90
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	242	26	6	88.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_11720  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.3% (242/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_11720  91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.3% (242/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_11720  181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.3% (242/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_11720  271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.3% (242/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_67805

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           319     2e-89
IGHD5-12*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	T	TGGTTACGAT	CGATTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTTGGTTACGATCGATTCCTTGACAAC	ARVGYDRFLDN	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  N  D  G  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  R 
                    Query_11721  1    ACCCTGTCCCTCACCTGCACTGTCTCGGGTGGCTCCGTCAACGATGGTAATTATTACTGGAGCTGGATCCGACAGCCCCCAGGGAAGAGA  90
V  90.8% (227/250)  IGHV4-61*01  49   ..........................T.............G.AG.....G...C.................G...............G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  F  I  Y  Y  T  G  S  T  T  D  N  P  S  L  K  S  R  V  T  M  S  V  D  T  P 
                    Query_11721  91   CTGGAGTGGATGGGGTTTATCTATTACACTGGGAGCACCACCGACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGCCC  180
V  90.8% (227/250)  IGHV4-61*01  139  ...........T....A...........G...........A.T...............................A.....A......T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  R  L  W  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  V  G  Y  D  R  F  L 
                    Query_11721  181  AAGAACCAGTTCTCCCTGCGGCTATGGTCTGTGACCTCTGCGGACACGGCCGTGTATTACTGTGCCAGAGTTGGTTACGATCGATTCCTT  270
V  90.8% (227/250)  IGHV4-61*01  229  ..................AA...GA.C.........G............................G....--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD5-12*01  11   -----------------------------------------------------------------------...C......---------  20
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11721  271  GACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  97.6% (41/42)    IGHJ4*02     9    ...T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_67801

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           260     1e-71
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	93	21	0	81.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	205	39	0	84


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_11722  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  84.0% (205/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_11722  91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  84.0% (205/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_11722  181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACGTAT  270
V  84.0% (205/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_11722  271  GTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    ---------------------------------...G....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_67800

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           276     3e-76
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	215	29	6	86


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_11723  4    CCCTGAGACTCTCCTGTGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.0% (215/250)  IGHV4-34*01  50   .....TCC...A....C.....C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  P  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_11723  94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGCCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.0% (215/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.T.....A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_11723  184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.0% (215/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_11723  274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_67803

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           397     8e-113
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGCG	GCCCT	TATCGCAGC	CTCTCATTTCTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCTCTGACTCC	AALIAASHFSDS	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	270	16	0	94.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  R  G  S  G  Y  S  F  T  T  Y
                    Query_11724  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGCTCTGGATACAGCTTTACCACCTA  90
V  94.4% (270/286)  IGHV5-51*01  6    ..................................................A...........A...T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  G  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_11724  91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCTTGGGGTTGATGGGGATCATCTATCCTGGTGACTCTGACACCAGATACAGTCC  180
V  94.4% (270/286)  IGHV5-51*01  96   ......................A.......G......C...A..G..............................T...........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  N  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_11724  181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  94.4% (270/286)  IGHV5-51*01  186  ....................C...................A...G.......................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        M  Y  Y  F  A  A  L  I  A  A  S  H  F  S  D  S  W  G  P  G  A  L  V  T  V  S  S 
                    Query_11724  271  CATGTATTACTTTGCGGCCCTTATCGCAGCCTCTCATTTCTCTGACTCCTGGGGCCCGGGAGCCCTGGTCACCGTCTCCTCA  352
V  94.4% (270/286)  IGHV5-51*01  276  ...........G....------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                   
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....----------------------------------------------------  12
J  92.5% (37/40)    IGHJ4*02     8    ------------------------------------------.....A........A....A....................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_67802

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           419     2e-119
IGHD2-2*01                                                                                            10.3    136   
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCAAGGC	ACCAG	TTCCCTCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCAAGGCACCAGTTCCCTCTTACTTTGACTAC	ARDPKAPVPSYFDY	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	111	3	0	97.4
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	282	14	0	95.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  F 
                    Query_11725  1    CAGGTCCAGCTTGTGCAGTCTGGAGCCGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCCGGTTACACCTTTTTC  90
V  95.3% (282/296)  IGHV1-18*04  1    .....T.....G..............T...............................................T............AC.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  G  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  S  N  Y 
                    Query_11725  91   ACCTACGGCATCCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACTCAAACTAT  180
V  95.3% (282/296)  IGHV1-18*04  91   .G......T...AG...................................................................A........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  Y  D  D 
                    Query_11725  181  GCACAGAAACTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTCAGATATGACGAC  270
V  95.3% (282/296)  IGHV1-18*04  181  ........G....................................................................G....C.......  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  D  P  K  A  P  V  P  S  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_11725  271  ACGGCCGTGTATTACTGTGCGAGAGATCCCAAGGCACCAGTTCCCTCTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  360
V  95.3% (282/296)  IGHV1-18*04  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD2-2*01   17   -----------------------------------.....--------------------------------------------------  21
J  100.0% (46/46)   IGHJ4*02     3    ------------------------------------------------..........................................  44

                                          
                                       S  
                    Query_11725  361  TCAG  364
J  100.0% (46/46)   IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_67809

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           294     6e-82
IGHD2-8*01                                                                                            14.1    8.1  
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-8*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCGGAC	AATGGTG	G	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCGCGGACAATGGTGGTTTGATATG	VRDRGQWWFDM	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  V  F  N  V  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11726  1    GGTCCCTGAGACTCTCCTGTGCAGGCAGTGGATTCGTCTTCAATGTTTATGGCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  87.6% (219/250)  IGHV3-21*01  47   ........................C.TC.......AC.....G.AGC...A.......C..........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  V  D  S  N  F  K  Y  Y  G  D  S  M  K  G  R  F  T  I  S  R  D  N  P  
                    Query_11726  91   AGTGGGTCTCATCCATTAGTGTTGACAGTAATTTCAAGTACTACGGAGACTCAATGAAGGGCCGATTCACCATCTCCAGAGACAACCCCA  180
V  87.6% (219/250)  IGHV3-21*01  137  ....................AG.AGT....G..A..TA.......C.......G................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  I  D  S  L  R  A  E  D  T  A  V  Y  F  C  V  R  D  R  G  Q  W  W  F  
                    Query_11726  181  AGAACTCACTGTATCTGCAAATCGATAGCCTGAGAGCCGAGGACACGGCTGTCTATTTTTGTGTGAGAGATCGCGGACAATGGTGGTTTG  270
V  87.6% (219/250)  IGHV3-21*01  227  ......................GA.C..........................G....AC....C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-8*01   14   ------------------------------------------------------------------------------.......-----  20
J  95.3% (41/43)    IGHJ3*02     8    --------------------------------------------------------------------------------------....  11

                                      ---->                                  
                                      D  M  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11726  271  ATATGTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  309
J  95.3% (41/43)    IGHJ3*02     12   ....C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_67808

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         318     6e-89
IGHD3-22*01                                                                                           14.1    9.1  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCATATGCCTACGAAGACAGAAA	TTATTAC	N/A	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATTCATATGCCTACGAAGACAGAAATTATTACTTCGACCCC	ARDSYAYEDRNYYFDP	264	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	77	27	25	2	0	92.6
FR2-IMGT	78	128	51	48	3	0	94.1
CDR2-IMGT	129	149	21	12	9	0	57.1
FR3-IMGT	150	263	114	98	16	0	86
CDR3-IMGT (germline)	264	271	8	7	1	0	87.5
Total	N/A	N/A	271	237	34	0	87.5


Alignments

                                        <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                           G  L  V  K  P  S  E  T  L  S  L  I  C  S  V  S  G  Y  S  I  N  S  G  Y  Y  W  A  W  I  
                    Query_11727    1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCATCTGCTCTGTCTCTGGTTACTCCATAAACAGTGGTTACTACTGGGCCTGGATCC  90
V  87.5% (237/271)  IGHV4-38-2*02  26   ................T...................C....A...................C.G.................G........  115
                                           G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  

                                        --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                        R  Q  S  P  G  K  G  L  E  W  I  G  S  V  Y  R  T  G  N  M  Y  Y  S  P  S  F  E  S  R  V  
                    Query_11727    91   GCCAGTCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTGTCTATCGTACCGGTAATATGTACTACAGTCCGTCCTTCGAGAGTCGAGTCA  180
V  87.5% (237/271)  IGHV4-38-2*02  116  .G...C................................A......A..GT..G.GC.CC.......AC......C..A............  205
                                        R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  

                                        ----------------------FR3-IMGT----------------------------------------------------><------
                                        T  L  L  V  D  K  A  K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  
                    Query_11727    181  CTCTATTAGTAGACAAGGCGAAGAACCAGTTCTCGTTGAGGTTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGCGAG  270
V  87.5% (237/271)  IGHV4-38-2*02  206  .CA...C........C.T.C..............CC...A.C...G.................................C......A...  295
                                        T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  

                                        -------------CDR3-IMGT------------------>                                  
                                        D  S  Y  A  Y  E  D  R  N  Y  Y  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11727    271  ATTCATATGCCTACGAAGACAGAAATTATTACTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  345
V  87.5% (237/271)  IGHV4-38-2*02  296  .--------------------------------------------------------------------------  296
                                                                                                                   
D  100.0% (7/7)     IGHD3-22*01    22   -------------------------.......-------------------------------------------  28
J  100.0% (43/43)   IGHJ5*02       9    --------------------------------...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_342678

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD3-10*01                                                                                           12.2    34   
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	264	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	77	27	22	5	0	81.5
FR2-IMGT	78	128	51	48	3	0	94.1
CDR2-IMGT	129	149	21	14	7	0	66.7
FR3-IMGT	150	263	114	96	18	0	84.2
CDR3-IMGT (germline)	264	269	6	5	1	0	83.3
Total	N/A	N/A	269	232	37	0	86.2


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  
                    Query_11728  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCC  90
V  86.2% (232/269)  IGHV4-4*02   26   ................T....G...................G.........G...........G..GT.....C................  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  
                    Query_11728  91   GCCAGCCCCCCGGGAAGGGGCTGGAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCA  180
V  86.2% (232/269)  IGHV4-4*02   116  ..........A..............G...........A.........A.T..GAG.AC.......AAC...T.....A............  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      S  M  S  V  D  K  S  K  N  Q  F  S  L  T  L  T  S  L  N  A  A  D  T  A  V  Y  F  C  A  G  
                    Query_11728  181  GCATGTCAGTAGACAAGTCCAAGAATCAATTCTCCCTCACGCTGACGTCTCTGAACGCCGCGGACACGGCCGTATATTTCTGCGCGGGAC  270
V  86.2% (232/269)  IGHV4-4*02   206  C...A....................C..G........G.A.....GC...G...C..................G....A...T...A..-  294
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  

                                      ----------CDR3-IMGT--------------->                                  
                                      H  L  A  T  R  G  T  R  G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_11728  271  ATCTGGCGACACGTGGCACTCGGGGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  339
D  100.0% (6/6)     IGHD3-10*01  14   -------------------......--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    --------------------------.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_251749

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           336     1e-94
IGHD3-10*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GCATCAGTGCCTT	TGGTTCGGGGAG	CGC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGGCATCAGTGCCTTTGGTTCGGGGAGCGCTATGGACGTC	VKGISAFGSGSAMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11729  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCCATGCCATGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-23*01  47   ...........................................C...T...................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  N  G  G  T  T  H  Y  A  D  S  V  Q  G  R  S  I  I  S  R  D  N  S  
                    Query_11729  91   AGTGGGTCTCAGTTATTAGTGGCAATGGTGGTACCACACATTACGCAGACTCCGTGCAGGGCCGGTCCATCATCTCCAGAGACAATTCCA  180
V  93.2% (232/249)  IGHV3-23*01  137  ............C.........T.G........G....T.C...............A.........T..C....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  T  L  R  A  G  D  T  A  V  Y  Y  C  V  K  G  I  S  A  F  G  S  
                    Query_11729  181  AGAACACCTTGTATCTGCAAATGAACACCCTGAGAGCCGGGGACACGGCCGTATATTACTGTGTGAAAGGCATCAGTGCCTTTGGTTCGG  270
V  93.2% (232/249)  IGHV3-23*01  227  .......GC..................G...........A.......................C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD3-10*01  10   ----------------------------------------------------------------------------------........  17

                                      ---------------->                                 
                                      G  S  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11729  271  GGAGCGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
D  100.0% (12/12)   IGHD3-10*01  18   ....----------------------------------------------  21
J  100.0% (43/43)   IGHJ6*02     20   -------...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_251741

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           355     3e-100
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCT	TTACTATGATAGTAGTGCTTA	CTATGCCTCTTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCTTTACTATGATAGTAGTGCTTACTATGCCTCTTTCTACGTTCTGGACGTC	ARELYYDSSAYYASFYVLDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	239	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  T  V  S  L  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_11730  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCACCGTCAGTCTTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  95.2% (239/251)  IGHV4-61*01  49   .................................T.......CAG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  V  Y  F  N  G  N  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_11730  91   CTGGAGTGGATTGGGTATGTCTATTTCAATGGGAACACCAATTACAACCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCC  180
V  95.2% (239/251)  IGHV4-61*01  139  ..................A......A..G.....G......C........................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  L  Y  Y  D  S  S 
                    Query_11730  181  AAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGAGCTTTACTATGATAGTAGT  270
V  95.2% (239/251)  IGHV4-61*01  229  .....................C...............................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.2% (20/21)    IGHD3-22*01  4    --------------------------------------------------------------------------................  19

                                      DR3-IMGT------------------------>                                 
                                       A  Y  Y  A  S  F  Y  V  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11730  271  GCTTACTATGCCTCTTTCTACGTTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  336
D  95.2% (20/21)    IGHD3-22*01  20   .G...-------------------------------------------------------------  24
J  95.9% (47/49)    IGHJ6*02     14   -----------------.....G.A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_251742

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           305     3e-85
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGGGTCCT	TATAGTGGGAGC	CCGCAAGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACTTC	AKPGPYSGSPQGYFDF	239	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	49	2	0	96.1
CDR2-IMGT	101	124	24	16	8	0	66.7
FR3-IMGT	125	238	114	109	5	0	95.6
CDR3-IMGT (germline)	239	244	6	6	0	0	100
Total	N/A	N/A	231	213	18	0	92.2


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  T  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I 
                    Query_11731  14   TGTGCAGCCTCTGGATTCACCTTTAGCACCTTCGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAACTATT  103
V  92.2% (213/231)  IGHV3-23*01  64   ............................G..AT........C..........................................G.....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       T  E  T  G  R  N  S  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  K  N  T  L  Y  L 
                    Query_11731  104  ACTGAGACTGGTCGTAATTCATACTACGCAGACTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCAAGAACACACTGTATCTG  193
V  92.2% (213/231)  IGHV3-23*01  154  .G..GT.G....G...GCA............................G....C...............T...........G.........  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  G  P  Y  S  G  S  P  Q  G  Y  F  D 
                    Query_11731  194  CAAATGAACACCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGAC  283
V  92.2% (213/231)  IGHV3-23*01  244  ..........G........................................---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (12/12)   IGHD1-26*01  3    ------------------------------------------------------------............------------------  14
J  97.8% (45/46)    IGHJ4*02     3    ---------------------------------------------------------------------------------.........  11

                                      -->                                  
                                       F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11731  284  TTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  320
J  97.8% (45/46)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_251743

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         408     4e-116
IGHD4-17*01                                                                                           18.0    0.66  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTGGG	GGTGACTAC	GACGGGCCTGGTG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTGGGGGTGACTACGACGGGCCTGGTGTTGACCAC	ARLGGDYDGPGVDH	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	77	72	69	3	0	95.8
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	110	4	0	96.5
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  A  F  A  N 
                    Query_11732    6    GTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGCTTCTGGATACGCCTTTGCCAAC  95
V  94.8% (276/291)  IGHV5-10-1*01  4    ..G.....G..........................................................G..........AG....A...G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  D  D  S  Y  T  N  Y  S 
                    Query_11732    96   TACTGGATCAGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTGATGACTCTTACACCAACTACAGC  185
V  94.8% (276/291)  IGHV5-10-1*01  94   ...........C......................................................AG.........T............  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  V  S  T  V  Y  L  Q  W  G  S  L  K  A  S  D  T 
                    Query_11732    186  CCGTCCTTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCGTCAGCACTGTCTACCTCCAGTGGGGCAGCCTGAAGGCCTCGGACACC  275
V  94.8% (276/291)  IGHV5-10-1*01  184  ..........................................A.........C......G......A.......................  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><----------------CDR3-IMGT--------------->                                 
                                         A  M  Y  Y  C  A  R  L  G  G  D  Y  D  G  P  G  V  D  H  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_11732    276  GCCATGTATTACTGTGCGAGACTTGGGGGTGACTACGACGGGCCTGGTGTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  365
V  94.8% (276/291)  IGHV5-10-1*01  274  .....................---------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                      
D  100.0% (9/9)     IGHD4-17*01    8    ---------------------------.........------------------------------------------------------  16
J  97.6% (41/42)    IGHJ4*02       7    -------------------------------------------------.....T...................................  47

                                         
                                         
                    Query_11732    366  G  366
J  97.6% (41/42)    IGHJ4*02       48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_251744

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.043
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11733  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11733  91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_11733  181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11733  271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_251745

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           288     5e-80
IGHD2-8*02                                                                                            19.9    0.16 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGATGCGGCGGAGCGAAATCA	GTACTGGTGG	GG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATGCGGCGGAGCGAAATCAGTACTGGTGGGGACTACTTTGACCGC	ARMRRSEISTGGDYFDR	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  V  P  Y  L  W  S  W  V  R  Q  H  P  V  K  G 
                    Query_11734  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATAAGAAGTGTTCCTTACCTCTGGAGCTGGGTCCGCCAGCACCCAGTGAAGGGC  90
V  87.4% (215/246)  IGHV4-31*03  49   ......................................C..C....G.GG....TA..........A...............G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  Y  M  Y  Y  S  G  S  N  R  Y  N  P  S  L  K  S  R  V  S  M  S  L  D  T  S 
                    Query_11734  91   CTGGAGTGGATTGCATACATGTACTACAGTGGGAGTAATCGCTACAACCCGTCCCTCAAGAGTCGAGTTTCCATGTCGCTAGACACGTCT  180
V  87.4% (215/246)  IGHV4-31*03  139  .............GG.....C..T...........C.CCTA............................A....A..AG...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       R  N  Q  F  S  L  R  L  T  S  M  T  A  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  I  S 
                    Query_11734  181  AGGAACCAGTTCTCCCTAAGGCTGACCTCTATGACGGCCGCGGACACGGCCATCTACTACTGTGCGCGGATGCGGCGGAGCGAAATCAGT  270
V  87.4% (215/246)  IGHV4-31*03  229  .A...............G.A.....G....G....T...............G.G..T.........------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (10/10)   IGHD2-8*02   9    ----------------------------------------------------------------------------------------..  10

                                      MGT-------------------->                                  
                                       T  G  G  D  Y  F  D  R  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_11734  271  ACTGGTGGGGACTACTTTGACCGCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  328
D  100.0% (10/10)   IGHD2-8*02   11   ........--------------------------------------------------  18
J  91.7% (44/48)    IGHJ4*02     1    ----------...........TA.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_251746

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           324     8e-91
IGHD5-12*01                                                                                           14.1    8.4  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAAAGG	GGCTGCGATT	TGCGTTTGGTGA	TCGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAAAGGGGCTGCGATTTGCGTTTGGTGATCGGCCCC	AREKRGCDLRLVIGP	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	229	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  S  N  Y  Y  W  G  W  I  R  Q  P  Q  G  K  G 
                    Query_11735  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGCAGTAATTACTACTGGGGCTGGATCCGCCAGCCCCAAGGGAAGGGG  90
V  91.2% (229/251)  IGHV4-39*02  49   ...................C........................T....G.............................C..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  G  F  Y  S  T  G  S  T  Y  Y  T  P  S  L  K  S  R  V  T  I  S  I  D  T  P 
                    Query_11735  91   CTGGAGTGGATTGGGGGTTTTTACTCTACTGGGAGCACCTACTACACCCCGTCCCTCAAGAGTCGAGTCACCATATCCATAGACACGCCC  180
V  91.2% (229/251)  IGHV4-39*02  139  ...............A..A.C..T.A..G.................A...............................G........T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  G  F  S  L  K  L  T  S  V  T  A  A  A  T  A  D  Y  Y  F  A  R  E  K  R  G  C  D  L 
                    Query_11735  181  AGGAACGGGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGCCACGGCTGACTATTACTTTGCGAGAGAGAAAAGGGGCTGCGATTTG  270
V  91.2% (229/251)  IGHV4-39*02  229  .A....CAC................G.................A........TG.......G.........-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD5-12*01  12   ------------------------------------------------------------------------------....A.....--  21

                                      ----------------->                                  
                                       R  L  V  I  G  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11735  271  CGTTTGGTGATCGGCCCCTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  322
J  95.2% (40/42)    IGHJ5*02     10   ----------...A...........A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_262759

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           316     2e-88
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGCTCCCCCCTCAC	TATATCAATGGCTGG	GACT	TTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGCTCCCCCCTCACTATATCAATGGCTGGGACTTTTGGCTTC	ACSPLTISMAGTFGF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	221	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  T  P  G  K  E  L  E 
                    Query_11736  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATAAGTAGTTATTACTGGAACTGGATCCGGCAGACCCCAGGGAAGGAACTGGAG  90
V  92.1% (221/240)  IGHV4-59*08  49   ......................................C........C.......G.............C............G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  T  G  S  A  N  Y  N  P  S  L  K  S  R  V  S  M  S  V  D  S  S  K  N 
                    Query_11736  91   TGGATTGGGTATGTCTATTACACTGGGAGCGCCAACTACAACCCCTCCCTCAAGAGTCGAGTCAGCATGTCGGTGGACTCGTCCAAGAAT  180
V  92.1% (221/240)  IGHV4-59*08  139  ............A.........G.......A.................................C...A..A..A...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  S  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  C  S  P  L  T  I  S  M  A  G 
                    Query_11736  181  CAGTTCTCCCTGAGTCTGAGTTCTGTGACCGCCGCAGACACGGCCATCTATTACTGTGCGTGCTCCCCCCTCACTATATCAATGGCTGGG  270
V  92.1% (221/240)  IGHV4-59*08  229  .............AG.....C........................G.G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  86.7% (13/15)    IGHD6-19*01  4    --------------------------------------------------------------------------....G..G.......-  18

                                      ----------->                                  
                                       T  F  G  F  W  G  Q  G  S  L  V  R  V  S  S  
                    Query_11736  271  ACTTTTGGCTTCTGGGGCCAGGGATCCCTGGTCCGCGTCTCCTCAG  316
J  88.4% (38/43)    IGHJ4*02     6    ---....A..A.............A........AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_262758

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*03                                                                                           304     9e-85
IGHD4-17*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*03	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGAATAC	AG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGAATACAGCAACTGGATCGACCCC	ARDSGEYSNWIDP	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	44	7	0	86.3
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	104	10	0	91.2
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  D  S  V  S  S  A  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  
                    Query_11737  4    CCCTGAGACTCTCCTGTAGTGTCTCTGGTGACTCCGTCAGCAGTGCTAGTTACTACTGGACATGGATCCGGCAGCCCCCAGGAAAGGGGC  93
V  88.8% (222/250)  IGHV4-61*03  50   .....TCC...A....C.C...........G..............G..............GC....................G.....A.  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  N  R  G  R  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  A  D  T  S  
                    Query_11737  94   TGGAGTGGATCGGTAATATCTATAACAGAGGGCGCACCAATTATAATCCCTCCCTCCAAAGTCGAGTCACCATATCAGCAGACACATCCA  183
V  88.8% (222/250)  IGHV4-61*03  140  ..........T..GT........T....T...A.......C..C..C.........A.G...................T......G....  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  G  E  Y  S  N  
                    Query_11737  184  AGAACCACTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATTCCGGTGAATACAGCAACT  273
V  88.8% (222/250)  IGHV4-61*03  230  ....................C...G...........................G.................--------------------  299
                                      K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD4-17*01  7    -------------------------------------------------------------------------......C...-------  16
J  92.0% (46/50)    IGHJ5*02     2    -------------------------------------------------------------------------------------.....  6

                                      ---------->                                  
                                      W  I  D  P  W  G  Q  G  A  L  V  I  V  S  S  
                    Query_11737  274  GGATCGACCCCTGGGGCCAGGGAGCCCTGGTCATTGTCTCCTCAG  318
J  92.0% (46/50)    IGHJ5*02     7    ..T....................A.........CC..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_318658

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           350     8e-99
IGHD3-22*01                                                                                           41.1    7e-08
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCAGCCA	GTATTACTATGATACTAATGGTTATTA	TGGGGAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCAGCCAGTATTACTATGATACTAATGGTTATTATGGGGAATACTACTTTGACTAC	ARVSQYYYDTNGYYGEYYFDY	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  I  S  V  S  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11738  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTATCTCCGTCAGTAGTTACTACTGGGCCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*02  49   ...................C..........GG......................AG..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_11738  91   TGGATTGGTTATATCTATTCCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCTCCATATCTGTAGACACGTCCAAGAAC  180
V  95.9% (234/244)  IGHV4-59*02  139  ........G..........A...........................................A.......A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  Q  Y  Y  Y  D  T  N 
                    Query_11738  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGTCAGCCAGTATTACTATGATACTAAT  270
V  95.9% (234/244)  IGHV4-59*02  229  ...............................................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.6% (25/27)    IGHD3-22*01  1    -----------------------------------------------------------------------..............G..G.  19

                                      MGT-------------------------->                                
                                       G  Y  Y  G  E  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11738  271  GGTTATTATGGGGAATACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  332
D  92.6% (25/27)    IGHD3-22*01  20   ........------------------------------------------------------  27
J  100.0% (46/46)   IGHJ4*02     1    ----------------..............................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_290946

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            318     5e-89
IGHD5-18*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TC	GTGGATTCAGCTATGG	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCGTGGATTCAGCTATGGTGACTAC	ASRGFSYGDY	241	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  T  N  N  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_11739  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCACTAATAATAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  91.4% (224/245)  IGHV4-4*02   49   ...............................G........GC.G..G.........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  A  E  T  Y  H  S  G  L  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  N 
                    Query_11739  91   GAGTGGATTGCAGAAACCTATCACAGTGGGTTAACCAAGTACAACCCCTCCCTCAAGAGTCGAGTCACTATATCAGTCGACAAGTCCAAC  180
V  91.4% (224/245)  IGHV4-4*02   139  ..........GG....T......T......AGC.....C........G....................C........A...........G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------CDR3-IMGT--------->
                                       N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  G  F  S  Y  G  D  Y 
                    Query_11739  181  AACCAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGTCGTGGATTCAGCTATGGTGACTAC  270
V  91.4% (224/245)  IGHV4-4*02   229  ................A.C...G..........................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  93.8% (15/16)    IGHD5-18*01  1    -------------------------------------------------------------------......A.........-------  16
J  97.6% (40/41)    IGHJ4*02     8    -----------------------------------------------------------------------------------.......  14

                                                                        
                                       W  G  Q  G  I  L  V  T  V  S  S  
                    Query_11739  271  TGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  304
J  97.6% (40/41)    IGHJ4*02     15   .............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_14818

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            311     4e-87
IGHD6-6*01                                                                                            12.2    32   
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CAAG	TCGTCC	GAAATCGACA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACAAGTCGTCCGAAATCGACAACTTCTACGGTTTGGACGTC	AKDKSSEIDNFYGLDV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	11	1	0	91.7
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	125	24	20	4	0	83.3
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	233	216	17	0	92.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  F  G  F  T  F  E  D  Y  A  M  H  W  V  R  Q  G  P  G  K  G  L  E  W  V  S  G  I 
                    Query_11740  15   TGTGCAGCCTTTGGATTCACGTTTGAAGATTATGCCATGCACTGGGTCCGGCAAGGTCCAGGGAAGGGCCTGGAATGGGTCTCAGGAATT  104
V  92.7% (216/233)  IGHV3-9*01   64   ..........C.........C.....T............................C..................G...........T...  153
                                       C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  W  N  G  Y  T  I  A  Y  A  D  S  V  K  G  R  F  T  L  S  R  D  N  A  R  N  S  L  Y  L 
                    Query_11740  105  AGTTGGAATGGTTATACCATAGCCTATGCGGACTCTGTGAAGGGCCGATTCACCCTCTCCAGAGACAACGCCAGGAACTCCCTGTATCTG  194
V  92.7% (216/233)  IGHV3-9*01   154  .........A..GG..G.....G...............................A..................A................  243
                                       S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       Q  M  N  S  L  G  A  D  D  T  A  F  Y  Y  C  A  K  D  K  S  S  E  I  D  N  F  Y  G  L  D 
                    Query_11740  195  CAAATGAACAGTCTGGGAGCTGACGACACGGCCTTCTATTATTGTGCAAAAGACAAGTCGTCCGAAATCGACAACTTCTACGGTTTGGAC  284
V  92.7% (216/233)  IGHV3-9*01   244  ...............A.......G...........G.....C...........-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                                        
D  100.0% (6/6)     IGHD6-6*01   13   ---------------------------------------------------------......---------------------------  18
J  96.2% (51/53)    IGHJ6*02     10   -------------------------------------------------------------------------...A.......A.....  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11740  285  GTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  96.2% (51/53)    IGHJ6*02     27   ....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_262754

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           290     1e-80
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	240	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	18	8	0	69.2
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	214	29	0	88.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  A  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E  
                    Query_11741  4    CCCTGAGACTCTCCTGTGCAGCCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAGT  93
V  88.1% (214/243)  IGHV4-59*01  50   .....TCC...A....CA.T.T......T..........GTAG..A..A......C............C.....GG..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N  
                    Query_11741  94   GGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAACC  183
V  88.1% (214/243)  IGHV4-59*01  140  ..A....G...A.....T..........C.....C.....................................T.................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------CDR3-IMGT-------->       
                                      Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G  
                    Query_11741  184  AGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGCC  273
V  88.1% (214/243)  IGHV4-59*01  230  ..T...............G................................A...........---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (7/7)     IGHD5-18*01  10   ---------------------------------------------------------------.......--------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------------------------------.....T.........  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_11741  274  AGGGAACCCTGGTCACCGTCTCCTCAG  300
J  97.6% (41/42)    IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_14815

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           343     2e-96
IGHD2-2*01                                                                                            37.2    1e-06
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCC	ATATTGTAGTAGTACCAACTGC	CTCATGGGGTACTTT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCCATATTGTAGTAGTACCAACTGCCTCATGGGGTACTTTTACGGTTTGGACGTC	ARPYCSSTNCLMGYFYGLDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  I  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11742  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGTATTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  94.3% (233/247)  IGHV3-30*04  47   ....................................C........GC......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  T  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11742  91   AGTGGGTGTCTTTTACATCATATGATGGAAGTAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCGA  180
V  94.3% (233/247)  IGHV3-30*04  137  ........G.AG...T........................................................................C.  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  K  M  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  H  C  A  R  P  Y  C  S  S  T  N  
                    Query_11742  181  AGAAAATGCTGTATCTGGAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTCTATCACTGTGCGAGGCCATATTGTAGTAGTACCAACT  270
V  94.3% (233/247)  IGHV3-30*04  227  ....C.C..........C..................................G...T..........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  95.5% (21/22)    IGHD2-2*01   4    ----------------------------------------------------------------------.................G..  23

                                      R3-IMGT------------------------>                                 
                                      C  L  M  G  Y  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11742  271  GCCTCATGGGGTACTTTTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  95.5% (21/22)    IGHD2-2*01   24   ..---------------------------------------------------------------  25
J  97.9% (47/48)    IGHJ6*02     15   -----------------......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_14816

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  C  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11743  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATGCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-33*01  47   .................................T..........AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11743  91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  96.8% (241/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_11743  181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  96.8% (241/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_11743  271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_14817

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           343     2e-96
IGHD1-26*01                                                                                           19.9    0.16 
IGHJ3*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAATATTGTCA	TGGGAGCTAC	GCCGTT	ATGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAATATTGTCATGGGAGCTACGCCGTTATGTTTTTGATATC	ARGILSWELRRYVFDI	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  Y  T  F  S  G  F  S  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11744  1    GGTCCCTGAGACTCTCCTGTGCTGCCTCTGGATACACATTCAGTGGTTTTAGCATCAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (233/247)  IGHV3-21*01  47   ......................A..........T...C......A.C.A......G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  G  S  D  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_11744  91   AGTGGGTCTCATCCATTAGTGGTGGTAGTGATTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  94.3% (233/247)  IGHV3-21*01  137  ....................A..A.....AG........................................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  I  L  S  W  E  L  
                    Query_11744  181  AGAACTCACTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGGGGAATATTGTCATGGGAGCTAC  270
V  94.3% (233/247)  IGHV3-21*01  227  ..........G.........................................G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD1-26*01  8    --------------------------------------------------------------------------------..........  17

                                      T------------------>                                  
                                      R  R  Y  V  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11744  271  GCCGTTATGTTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
J  97.9% (47/48)    IGHJ3*02     3    ------...C............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_14811

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           324     7e-91
IGHD6-6*01                                                                                            10.3    116  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACCCCC	GCTCG	CTTTGCA	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACCCCCGCTCGCTTTGCAGACTTC	ATTPARFADF	247	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	26	33	8	8	0	0	100
CDR1-IMGT	34	57	24	22	2	0	91.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	132	24	20	4	0	83.3
FR3-IMGT	133	246	114	112	2	0	98.2
CDR3-IMGT (germline)	247	250	4	4	0	0	100
Total	N/A	N/A	225	216	9	0	96


Alignments

                                      <FR1-IM><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><------
                                         A  S  G  F  A  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  I  S  Y  I  S  
                    Query_11745  26   CAGCCTCTGGATTCGCCTTCAGTGACTATTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGATTTCATACATCAGTC  115
V  96.0% (216/225)  IGHV3-11*01  68   ..............A.............C.............................................G..........T...A  157
                                         A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  S  

                                      -CDR2-IMGT------><----------------------------------------------------FR3-IMGT------------
                                      L  S  G  R  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  
                    Query_11745  116  TTAGTGGTAGGACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGCAGA  205
V  96.0% (216/225)  IGHV3-11*01  158  G.........T.............................................................................A.  247
                                      S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  

                                      ----------------------------------------><----------CDR3-IMGT--------->                   
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  T  P  A  R  F  A  D  F  W  G  Q  G  T  L  
                    Query_11745  206  TGAACAGCCTGAGAGCCGAAGACACGGCCGTGTATTACTGTGCGACGACCCCCGCTCGCTTTGCAGACTTCTGGGGCCAGGGAACCCTGG  295
V  96.0% (216/225)  IGHV3-11*01  248  ...................G.........................---------------------------------------------  292
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                               
D  100.0% (5/5)     IGHD6-6*01   11   -----------------------------------------------------.....--------------------------------  15
J  97.5% (39/40)    IGHJ4*02     9    -----------------------------------------------------------------....A....................  33

                                                     
                                      V  T  V  S  S  
                    Query_11745  296  TCACCGTCTCCTCAG  310
J  97.5% (39/40)    IGHJ4*02     34   ...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_14812

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*05                                                                                           346     2e-97
IGHD3-10*01                                                                                           33.4    1e-05
IGHJ1*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*05	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GAG	ACTATGGCTCGGGGAGTTAT	CCCCTTG	AGCAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGGAGACTATGGCTCGGGGAGTTATCCCCTTGAGCAC	TTGDYGSGSYPLEH	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	238	17	0	93.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  V  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11746  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTGTCAGTGTCGCCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.3% (238/255)  IGHV3-15*05  47   .......T..............................T.....AA...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  D  R  F  T  I  S  R  N  
                    Query_11746  91   AGTGGGTTGGCCGTATTAAGAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAGGACAGATTCACCATCTCAAGAAATG  180
V  93.3% (238/255)  IGHV3-15*05  137  ...................A............................................A.G...................G...  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  N  T  V  H  L  Q  M  N  S  V  K  T  E  D  T  A  V  Y  Y  C  T  T  G  D  Y  G  S  
                    Query_11746  181  ATTCAAAAAACACAGTACACCTGCAAATGAACAGTGTGAAGACCGAGGACACAGCCGTGTATTATTGTACCACAGGAGACTATGGCTCGG  270
V  93.3% (238/255)  IGHV3-15*05  227  .............GC.GT.T...............C....A.......................C..........---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  95.0% (19/20)    IGHD3-10*01  6    ------------------------------------------------------------------------------.......T....  17

                                      IMGT--------------->                                  
                                      G  S  Y  P  L  E  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11746  271  GGAGTTATCCCCTTGAGCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  95.0% (19/20)    IGHD3-10*01  18   ........----------------------------------------------  25
J  97.4% (38/39)    IGHJ1*01     14   ---------------................C......................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_205961

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           352     3e-99
IGHD4-4*01                                                                                            16.1    2.4  
IGHJ3*02                                                                                              58.4    1e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-4*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCGAA	TACAGTTACTA	ACAAGGCCGTTC	ATATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCGAATACAGTTACTAACAAGGCCGTTCATATC	AANTVTNKAVHI	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	285	255	30	0	89.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  S  E  V  R  K  P  G  A  S  V  K  V  S  C  K  A  S  G  N  D  F  I  N  Y 
                    Query_11747  2    CAGCTGGTGCAGTCTGGATCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGAAACGACTTTATCAACTAT  91
V  89.5% (255/285)  IGHV1-18*01  7    ..................G.........A..........................................TT..AC.....C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  V  Y  N  G  N  T  M  Y  A  E 
                    Query_11747  92   GGCATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGTTGGGATGGATCAGCGTTTACAATGGAAACACAATGTATGCAGAA  181
V  89.5% (255/285)  IGHV1-18*01  97   ..T....G.....................................A...............C.........T.......AC......C.G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  F  Q  G  R  V  T  M  T  A  N  T  S  T  T  T  V  Y  M  D  L  R  N  L  R  F  D  D  T  A 
                    Query_11747  182  AGGTTCCAGGGCAGAGTCACCATGACCGCAAACACATCCACGACCACAGTCTACATGGACCTGAGGAACCTAAGATTTGACGATACGGCC  271
V  89.5% (255/285)  IGHV1-18*01  187  .A.C.......................A..G............G.....C.........G.......G...G....C......C......  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  A  N  T  V  T  N  K  A  V  H  I  W  G  Q  G  T  W  V  S  V  S  S  
                    Query_11747  272  GTCTACTACTGTGCGGCGAATACAGTTACTAACAAGGCCGTTCATATCTGGGGCCAAGGGACATGGGTCAGCGTCTCTTCAG  353
V  89.5% (255/285)  IGHV1-18*01  277  ..G..T.........-------------------------------------------------------------------  291
                                       V  Y  Y  C  A                                                                    
D  90.9% (10/11)    IGHD4-4*01   5    --------------------......A....---------------------------------------------------  15
J  92.3% (36/39)    IGHJ3*02     12   -------------------------------------------....................AT.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_135026

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD2-8*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TAATGGTGT	GGCAGTGGCTAGAAGATTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAATGGTGTGGCAGTGGCTAGAAGATTTTTTGACTCC	ARDNGVAVARRFFDS	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  I  S  G  G  S  F  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  E  G  L  E 
                    Query_11748  1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGGCTCCTTCAGTTCTTATTACTGGAGCTGGATTCGGCAGTCCCCAGGGGAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   .....................G..............A.....AG...C..............C......C........A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11748  91   TGGATTGGCTATGTCTACTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G...A....T..C.....................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  N  G  V  A  V  A  R  R 
                    Query_11748  181  CAGTTCTCCCTGAGGCTGACGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATAATGGTGTGGCAGTGGCTAGAAGA  270
V  93.5% (229/245)  IGHV4-59*01  229  .............A.....GC..........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD2-8*01   13   -----------------------------------------------------------------.........----------------  21

                                      ----------->                                  
                                       F  F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_11748  271  TTTTTTGACTCCTGGGGCCAGGGAATCCTGGTCACCGTTTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.......A..............C............C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_283019

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           336     1e-94
IGHD2-2*01                                                                                            39.1    3e-07
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACG	TTGTAGTAGTACCAGCTGCT	TTTACGAG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACGTTGTAGTAGTACCAGCTGCTTTTACGAGATGGACGTC	ARVRCSSTSCFYEMDV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  N  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  Q  
                    Query_11749  4    CCCTGAGACTCTCCTGCACTGTCTCTGGCGACTCCATCAATAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGCAGT  93
V  94.2% (229/243)  IGHV4-59*01  50   .....TCC...A................T.G........G....T.........................................G...  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  K  N  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_11749  94   GGATTGGCTATATCTATTACAGTGGGAGCACCAAGAACAACCCTTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  94.2% (229/243)  IGHV4-59*01  140  .......G..........................CT.......C..............................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  C  S  S  T  S  C  F  
                    Query_11749  184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGTACGTTGTAGTAGTACCAGCTGCTTTT  273
V  94.2% (229/243)  IGHV4-59*01  230  ..............................................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (20/20)   IGHD2-2*01   7    -------------------------------------------------------------------....................---  26

                                      ------------->                                 
                                      Y  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11749  274  ACGAGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  100.0% (42/42)   IGHJ6*02     21   -----..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_283018

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*09                                                                                           350     9e-99
IGHD6-25*01                                                                                           10.3    133  
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*09	IGHD6-25*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGTCTTCCCGAGCGGGCT	CAGCG	AAT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTCTTCCCGAGCGGGCTCAGCGAATCC	ARGVFPSGLSES	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	257	33	0	88.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  E  V  S  C  K  A  S  G  G  S  S  S  I  Y
                    Query_11750  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGGAGGTCTCCTGCAAGGCCTCTGGAGGCAGTTCCAGCATCTA  90
V  88.6% (257/290)  IGHV1-69*09  6    .................................................A................T..........CC.T.....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  T  W  F  R  Q  A  P  G  Q  G  L  E  W  M  G  N  V  V  P  L  F  S  I  P  T  Y  A  Q
                    Query_11750  91   TGTTATCACCTGGTTCCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGAACGTCGTCCCTTTGTTTAGTATACCAACCTACGCACA  180
V  88.6% (257/290)  IGHV1-69*09  96   ..C.....G....G.G...................................A.GGA..A.....A.CC..G.....G...A.........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  I  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  V  Q  G  R  I  T  I  T  A  D  T  F  T  S  T  A  Y  M  E  L  S  S  L  T  S  D  D  T  A
                    Query_11750  181  GAAGGTCCAAGGCAGAATCACGATTACCGCGGACACATTCACGAGCACGGCGTACATGGAACTGAGCAGCCTGACATCTGACGACACGGC  270
V  88.6% (257/290)  IGHV1-69*09  186  ....T....G......G..................A..C.........A..C........G.............G......G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  R  G  V  F  P  S  G  L  S  E  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11750  271  CGTCTATTATTGTGCGAGAGGGGTCTTCCCGAGCGGGCTCAGCGAATCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  88.6% (257/290)  IGHV1-69*09  276  ...G.....C..........---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  100.0% (5/5)     IGHD6-25*01  9    ---------------------------------------.....---------------------------------------  13
J  100.0% (36/36)   IGHJ5*02     16   -----------------------------------------------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_283017

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-6*01                                                                                            14.1    8.3  
IGHJ3*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-6*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCC	AGTATCGAAGATCGTC	GGCTGGTTTCTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCAGTATCGAAGATCGTCGGCTGGTTTCTCTTGATATC	ARPSIEDRRLVSLDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	216	27	0	88.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  R  G  Y  Y  W  S  W  L  R  Q  S  P  G  K  G  L  Q 
                    Query_11751  1    ACCCTGTCCCTCACCTGCGCTGTTTATGGCGGATCATTCAGGGGCTACTACTGGAGTTGGCTCCGCCAGTCCCCAGGGAAGGGGCTGCAG  90
V  88.9% (216/243)  IGHV4-34*01  49   .......................C.....T..G..C.....T..T...........C...A........C.................G..  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  R  G  I  T  N  Y  I  P  S  L  K  S  R  L  T  M  S  V  D  T  S  K  N 
                    Query_11751  91   TGGATTGGAGAAATCAATCACAGAGGGATCACCAATTACATCCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACACCTCCAAGAAT  180
V  88.9% (216/243)  IGHV4-34*01  139  ........G...........T..T..A.G......C....A...................G.......A...........G........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  S  I  E  D  R  R  L  V 
                    Query_11751  181  CAATTCTCCCTGAAACTTAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGACCCAGTATCGAAGATCGTCGGCTGGTT  270
V  88.9% (216/243)  IGHV4-34*01  229  ..G...........G..G..C.......................T..G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  81.2% (13/16)    IGHD6-6*01   2    ------------------------------------------------------------------.....A.C..C.....--------  17

                                      ----------->                                  
                                       S  L  D  I  W  G  Q  G  T  M  V  V  V  S  S  
                    Query_11751  271  TCTCTTGATATCTGGGGCCAAGGGACAATGGTCGTTGTCTCTTCAG  316
J  92.9% (39/42)    IGHJ3*02     9    ----.............................ACC..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_283015

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           316     2e-88
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGGGGTGT	CAGCAGCGGGT	CCGGGCCGGCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGGTGTCAGCAGCGGGTCCGGGCCGGCCGACTAC	ARGGGVSSGSGPADY	234	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	119	21	19	2	0	90.5
FR3-IMGT	120	233	114	106	8	0	93
CDR3-IMGT (germline)	234	240	7	7	0	0	100
Total	N/A	N/A	228	215	13	0	94.3


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  L  T  V  T  R  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  
                    Query_11752  13   GTGCAGCCTCTGGGCTCACCGTCACTAGGAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATTT  102
V  94.3% (215/228)  IGHV3-53*01  65   ..............T.........G...C.............................................................  154
                                         A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  

                                      --CDR2-IMGT-----><----------------------------------------------------FR3-IMGT------------
                                      Y  T  G  G  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  S  S  K  N  T  L  L  L  Q  
                    Query_11752  103  ATACCGGTGGAAGCACATACTATTCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGAACACACTACTTCTTCAGA  192
V  94.3% (215/228)  IGHV3-53*01  155  ...G......T...........CG.......................................A............G..GTA......A.  244
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  

                                      ----------------------------------------><-----------------CDR3-IMGT----------------->    
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  G  V  S  S  G  S  G  P  A  D  Y  G  
                    Query_11752  193  TGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGGGGGGGGTGTCAGCAGCGGGTCCGGGCCGGCCGACTACGGGG  282
V  94.3% (215/228)  IGHV3-53*01  245  ................................................------------------------------------------  292
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                            
D  90.9% (10/11)    IGHD6-13*01  9    ----------------------------------------------------------.......T...---------------------  19
J  89.7% (35/39)    IGHJ4*02     9    --------------------------------------------------------------------------------......T...  18

                                                                   
                                      G  Q  G  P  L  V  P  V  P  S 
                    Query_11752  283  GCCAGGGACCCCTGGTCCCCGTCCCCTCA  311
J  89.7% (35/39)    IGHJ4*02     19   ........A........A.....T.....  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_283014

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*14                                                                                           382     4e-108
IGHD3-22*01                                                                                           33.4    2e-05 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*14	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCGGATC	ACTATGATAGTAGTGGT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCGGATCACTATGATAGTAGTGGTTACTACTACTATAATATGGACGTC	ARVPDHYDSSGYYYYNMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	18	6	0	75
FR3-IMGT	175	288	114	104	10	0	91.2
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	294	269	25	0	91.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  V  N  
                    Query_11753  2    AGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGTAAGGCTTCTGGAGGCACCGTCAACA  91
V  91.5% (269/294)  IGHV1-69*14  2    .............G........G.........................................C..................T...G..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  A  I  S  W  V  R  Q  A  P  G  H  G  L  E  W  V  G  V  V  I  L  L  L  D  T  S  Y  Y  
                    Query_11753  92   ACTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACACGGGCTTGAGTGGGTGGGAGTGGTCATCCTTCTCTTGGATACATCATATTACC  181
V  91.5% (269/294)  IGHV1-69*14  92   G....................................A............A......G.A......C.A....T.G....G..A.C...G  181
                                      S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      P  Q  K  F  Q  G  R  V  S  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  D  D  
                    Query_11753  182  CGCAGAAGTTCCAGGGCAGAGTCTCCATTACCGCGGACAAATCCACGAGCACTGCCTACATGGAGTTGAGCAGCCTGAGATCTGATGACA  271
V  91.5% (269/294)  IGHV1-69*14  182  .A.....................A.G..........................A............C...................G....  271
                                      A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  V  Y  Y  C  A  R  V  P  D  H  Y  D  S  S  G  Y  Y  Y  Y  N  M  D  V  W  G  Q  G  T  
                    Query_11753  272  CGGCCGTTTATTACTGTGCGAGAGTTCCGGATCACTATGATAGTAGTGGTTACTACTACTATAATATGGACGTCTGGGGCCAAGGGACCA  361
V  91.5% (269/294)  IGHV1-69*14  272  .......G................------------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                    
D  100.0% (17/17)   IGHD3-22*01  6    ---------------------------------.................----------------------------------------  22
J  93.0% (53/57)    IGHJ6*02     6    --------------------------------------------------...........CGG..........................  45

                                                       
                                      T  I  T  V  S  S 
                    Query_11753  362  CGATCACCGTCTCCTCA  378
J  93.0% (53/57)    IGHJ6*02     46   ..G..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_283013

Length=427
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           315     6e-88
IGHD6-13*01                                                                                           31.5    6e-05
IGHJ6*02                                                                                              79.5    5e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCCATCCCGAGGAGG	TAGCAGCAGCTGGTAC	CGAAAGGGGC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCCATCCCGAGGAGGTAGCAGCAGCTGGTACCGAAAGGGGCACTTCTACGCAATGGATGTC	ASPSRGGSSSWYRKGHFYAMDV	305	370	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	115	45	20	4	21	44.4
FR2-IMGT	116	166	51	47	4	0	92.2
CDR2-IMGT	167	190	24	16	8	0	66.7
FR3-IMGT	191	304	114	103	11	0	90.4
CDR3-IMGT (germline)	305	309	5	5	0	0	100
Total	N/A	N/A	309	257	31	21	83.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-----------------CD
                                        Q  L  V  Q  S  G  A  E  V  T  K  P  G  S  S  V  K  I  S  C  K  S  S  G  G  T  F  R  S  S
                    Query_11754  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGACGAAGCCTGGGTCCTCGGTGAAGATCTCCTGCAAGTCTTCTGGAGGCACCTTCAGGTCTTC  90
V  83.2% (257/309)  IGHV1-69*01  6    ..................G..........A......................G...........G...................C-----  90
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S      

                                      R1-IMGT-----------------><--------------------FR2-IMGT---------------------><-------CDR2-I
                                        G  Y  T  F  G  T  Y  A  M  T  W  V  R  Q  A  P  G  Q  G  L  E  W  I  G  G  I  I  A  I  A
                    Query_11754  91   TGGATACACCTTCGGAACTTATGCCATGACCTGGGTGCGACAGGCCCCTGGACAAGGGCTCGAGTGGATAGGAGGGATCATCGCCATCGC  180
V  83.2% (257/309)  IGHV1-69*01  91   ----------------.GC.....T..C.G..............................T........G............C.T...TT  164
                                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F

                                      MGT------><----------------------------------------------------FR3-IMGT-------------------
                                        G  I  I  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  A  S  T  G  Y  L  E  V  S  S
                    Query_11754  181  TGGTATAATCAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCGGCGAGTACAGGCTACTTGGAGGTGAGCAG  270
V  83.2% (257/309)  IGHV1-69*01  165  .....C.GCA..................................................CA....C....C....A.....C.......  254
                                        G  T  A  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S

                                      ---------------------------------><----------------------------CDR3-IMGT------------------
                                        L  N  S  E  D  T  A  V  Y  Y  C  A  S  P  S  R  G  G  S  S  S  W  Y  R  K  G  H  F  Y  A
                    Query_11754  271  TCTCAACTCTGAGGACACGGCCGTCTATTACTGTGCGAGCCCATCCCGAGGAGGTAGCAGCAGCTGGTACCGAAAGGGGCACTTCTACGC  360
V  83.2% (257/309)  IGHV1-69*01  255  C..G.GA.................G..............---------------------------------------------------  293
                                        L  R  S  E  D  T  A  V  Y  Y  C  A                                                      
D  100.0% (16/16)   IGHD6-13*01  6    ------------------------------------------------------................--------------------  21
J  92.5% (49/53)    IGHJ6*02     10   --------------------------------------------------------------------------------...A.....G  19

                                      --------->                                 
                                        M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11754  361  AATGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  403
J  92.5% (49/53)    IGHJ6*02     20   T.....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41971608


Query= Query_283012

Length=307
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           333     1e-93
IGHD5-12*01                                                                                           12.2    28   
IGHJ1*01                                                                                              16.1    4.4  


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD5-12*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GTCCCCAGCC	GTGGAT	CGT	GCACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGTCCCCAGCCGTGGATCGTGCAC	AKGPQPWIVH	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  F  G  M  N  W  V  R  Q  A  A  G  K  G  P  
                    Query_11755  1    GGTCTCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTCAGTAGCTTTGGCATGAACTGGGTCCGCCAGGCTGCAGGCAAGGGGCCGG  90
V  92.8% (231/249)  IGHV3-30*18  47   ....C...............................CC..........A.......C.................C............T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  A  D  D  G  S  E  N  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_11755  91   AGTGGGTGGCAGTTATAGCAGATGATGGAAGTGAGAACTATTATGCAGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (231/249)  IGHV3-30*18  137  .................T..T...........A.T..A..C...............A.................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  S  T  L  Y  L  Q  M  N  N  L  R  D  E  D  T  A  V  Y  Y  C  A  K  G  P  Q  P  W  I  V  
                    Query_11755  181  AGAGCACGCTGTATCTGCAAATGAACAACCTGAGAGATGAGGACACAGCTGTGTATTACTGTGCGAAAGGTCCCCAGCCGTGGATCGTGC  270
V  92.8% (231/249)  IGHV3-30*18  227  ...A.......................G........C.........G......................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD5-12*01  1    -------------------------------------------------------------------------------......-----  6
J  100.0% (8/8)     IGHJ1*01     15   ----------------------------------------------------------------------------------------..  16

                                      ->    
                                      H  W  
                    Query_11755  271  ACTGGG  276
J  100.0% (8/8)     IGHJ1*01     17   ......  22


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 29565480


Query= Query_283011

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            403     1e-114
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	CT	CTATGGTTCGGGGACTTATTATAAC	AT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACTCTATGGTTCGGGGACTTATTATAACATC	VRLYGSGTYYNI	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	288	273	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  Y 
                    Query_11756  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAAGTTTCCTGCAAGGCTTCTGGATACACCTTCACTGACTAT  91
V  94.8% (273/288)  IGHV1-3*01   7    .....T...........G................................G.................................AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       T  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  A  G  S  G  Y  T  R  Y  S  Q 
                    Query_11756  92   ACTATGCATTGGGTGCGCCAGGCCCCCGGACAAGGGCTTGAGTGGATGGGATGGATCAACGCTGGCAGTGGTTACACAAGATATTCACAG  181
V  94.8% (273/288)  IGHV1-3*01   97   G................................A.................................A....A......A..........  186
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  I  S  E  D  T  A 
                    Query_11756  182  AAGTTGCAGGGCAGAGTCACCATTACCAGGGACACATCCGCGAGTACAGCCTACATGGAGCTGAGCAGCCTGATATCTGAAGACACGGCT  271
V  94.8% (273/288)  IGHV1-3*01   187  .....C......................................C............................G................  276
                                       K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       M  Y  Y  C  V  R  L  Y  G  S  G  T  Y  Y  N  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11756  272  ATGTATTACTGTGTGAGACTCTATGGTTCGGGGACTTATTATAACATCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  94.8% (273/288)  IGHV1-3*01   277  G............C....----------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                 
D  96.0% (24/25)    IGHD3-10*01  7    --------------------..............G..........-------------------------------------  31
J  100.0% (35/35)   IGHJ4*02     14   -----------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_283010

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           307     1e-85
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGAC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAGGACGATGCTTTTGATATT	VREDDAFDI	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  S  S  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11757  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTTCCTCCAGTATGAACTGGGTCCGGCAGGCTCCAGGGAAGGGGCTGG  90
V  89.2% (223/250)  IGHV3-21*01  47   ...................................A........AG..AT..C..............C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  V  S  S  S  F  E  Y  Y  S  D  A  V  K  G  R  F  T  I  A  R  D  N  A  
                    Query_11757  91   AGTGGGTCTCATCCATTACTGTCAGTAGCAGTTTCGAGTACTATTCAGACGCAGTGAAGGGCCGATTCACCATCGCCAGAGACAATGCCA  180
V  89.2% (223/250)  IGHV3-21*01  137  ..................G.AGT.....T....A.ATA.....CG.....T.......................T..........C....  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  V  R  E  D  D  A  F  D  I  
                    Query_11757  181  AAAAGTCCCTGTATCTGCAAATGAACAGCCTAAGACCCGAGGACACGGCTGTGTATTACTGTGTGAGAGAGGACGATGCTTTTGATATTT  270
V  89.2% (223/250)  IGHV3-21*01  227  .G..C..A.......................G...G...........................C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  98.0% (48/49)    IGHJ3*02     2    --------------------------------------------------------------------------..............C.  17

                                                                       
                                      W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11757  271  GGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  303
J  98.0% (48/49)    IGHJ3*02     18   .................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_328611

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           361     4e-102
IGHD3-10*01                                                                                           14.1    8.1   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTA	GGG	CGGGGAG	AGGGGG	CTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGGGCGGGGAGAGGGGGCTTGGACTAC	RAGRGGLDY	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	110	4	0	96.5
CDR3-IMGT (germline)	249	249	1	1	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_11758  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  96.4% (240/249)  IGHV3-73*01  47   .........A................................................................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  H  I  R  S  I  S  N  S  Y  A  T  A  N  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_11758  91   AGTGGGTTGGCCATATTAGAAGCATCTCTAACAGTTACGCGACAGCAAATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATG  180
V  96.4% (240/249)  IGHV3-73*01  137  ............G...........AAG....................T..........................................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  E  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  R  A  G  R  G  G  L  
                    Query_11758  181  ATTCAGAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTCTATTATTGTAGGGCGGGGAGAGGGGGCTTGG  270
V  96.4% (240/249)  IGHV3-73*01  227  .....A....................................................G.....C....---------------------  295
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  100.0% (7/7)     IGHD3-10*01  15   ------------------------------------------------------------------------.......-----------  21
J  97.7% (43/44)    IGHJ4*02     5    -------------------------------------------------------------------------------------...T.  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11758  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.7% (43/44)    IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_328610

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           19.9    0.16 
IGHJ1*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	TTCCTCGGCGA	GTATTGCACTGGCTGG	AACATTTGGGGC	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTCCTCGGCGAGTATTGCACTGGCTGGAACATTTGGGGCC	ARGSSASIALAGTFGA	261	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	43	7	0	86
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	47	4	0	92.2
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	98	16	0	86
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	236	32	0	88.1


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  S  C  G  V  R  G  G  S  F  S  G  S  Y  W  A  W  I  R  
                    Query_11759  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCTCTTGCGGTGTCCGTGGTGGGTCCTTCAGTGGCTCTTACTGGGCCTGGATCCGCC  90
V  88.1% (236/268)  IGHV4-34*01  26   ........T.......T..................A.C....C....TA..................T.AC......AG...........  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  P  Q  Y  N  P  S  L  K  S  R  V  S  
                    Query_11759  91   AGCCCCCAGGCAAGGGGCTGGAGTGGATTGGCGAAATCAATCATAGTGGAAGTCCCCAATACAACCCGTCCCTCAAGAGTCGAGTCAGTA  180
V  88.1% (236/268)  IGHV4-34*01  116  ..........G....................G....................CA..A.C............................CC.  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  A  V  D  T  S  N  N  H  L  S  L  R  M  T  S  V  T  A  A  D  T  A  E  Y  Y  C  A  R  G  
                    Query_11759  181  TCGCAGTGGACACGTCGAACAACCACCTCTCCCTGAGGATGACCTCTGTTACCGCCGCGGACACGGCTGAGTATTACTGTGCGAGAGGTT  270
V  88.1% (236/268)  IGHV4-34*01  206  .AT....A........C..G.....GT.........A.C...G......G...................T..................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  

                                      ----------CDR3-IMGT------------------>                                  
                                      S  S  A  S  I  A  L  A  G  T  F  G  A  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_11759  271  CCTCGGCGAGTATTGCACTGGCTGGAACATTTGGGGCCTGGGGCCAGGGCACCCTAGTCACCGTCTCCGCAG  342
D  87.5% (14/16)    IGHD6-19*01  3    ---------....A...G.......-----------------------------------------------  18
J  94.3% (33/35)    IGHJ1*01     18   -------------------------------------..................G............T...  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_328613

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q 
                    Query_11760  1    ACCCTGTCCCTCACCTGCACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAA  90
V  91.0% (223/245)  IGHV4-59*01  49   ....................T..........................C........C............C.................G.G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_11760  91   TGGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAAC  180
V  91.0% (223/245)  IGHV4-59*01  139  ...A....G.....C...T....T....G......C..............C...........C.C.........A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E 
                    Query_11760  181  CAGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAG  270
V  91.0% (223/245)  IGHV4-59*01  229  ...T.........AG..G.G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  1    -----------------------------------------------------------------------------............-  12

                                      -------------->                                  
                                       D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_11760  271  GATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  319
J  92.5% (37/40)    IGHJ4*02     9    ---------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_328612

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-22*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TAAGATATCG	AGTAGTGG	CGTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAAGATATCGAGTAGTGGCGTCGACTAC	ASKISSSGVDY	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  V  G  Y  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_11761  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGTTGGTTACTACTGGACCTGGATCCGCCAGCACCCAGGCAAGGGC  90
V  96.4% (239/248)  IGHV4-31*03  49   ..............................................G..............G.....................G......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S 
                    Query_11761  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCACTAGACAAGTCT  180
V  96.4% (239/248)  IGHV4-31*03  139  ..............................................................................G......C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  R  F  S  L  K  L  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  S  K  I  S  S  S  G  V 
                    Query_11761  181  AAGAACCGGTTCTCCCTGAAGCTGAGCTCTATGACTGCTGCGGACACGGCCGTGTACTACTGTGCGAGTAAGATATCGAGTAGTGGCGTC  270
V  96.4% (239/248)  IGHV4-31*03  229  .......A......................G.......C.................T...........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (8/8)     IGHD3-22*01  14   ------------------------------------------------------------------------------........----  21

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11761  271  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (40/40)   IGHJ4*02     9    ........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_328615

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           392     2e-111
IGHD2-15*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGC	ATATTGTAGTGATAGTAACTGCTAC	CCGAGGGAGCG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGCATATTGTAGTGATAGTAACTGCTACCCGAGGGAGCGCTACTTTGACCAC	ARLAYCSDSNCYPRERYFDH	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  A  G  E  S  L  R  I  S  C  K  V  S  G  Y  K  F  A  T  Y
                    Query_11762  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGGCGGGGGAGTCTCTGAGGATCTCCTGTAAGGTGTCTGGATACAAGTTTGCCACCTA  90
V  93.4% (270/289)  IGHV5-51*03  6    ..................................C...............A..............GT..........GC...A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  M  Y  P  S  D  S  D  A  R  Y  S  P
                    Query_11762  91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATGTATCCTAGTGACTCTGATGCCAGATACAGCCC  180
V  93.4% (270/289)  IGHV5-51*03  96   C...................................................A....C......G...........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  G  L  E  A  S  D  T  A
                    Query_11762  181  GTCCTTTGAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGTGGCCTGGAGGCCTCGGACACCGC  270
V  93.4% (270/289)  IGHV5-51*03  186  ......CC................C.........................................CA.....A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  Y  C  A  R  L  A  Y  C  S  D  S  N  C  Y  P  R  E  R  Y  F  D  H  W  G  Q  G  T  L
                    Query_11762  271  CATGTATTACTGTGCGAGACTGGCATATTGTAGTGATAGTAACTGCTACCCGAGGGAGCGCTACTTTGACCACTGGGGCCAGGGAACCCT  360
V  93.4% (270/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  88.0% (22/25)    IGHD2-15*01  4    ------------------------...........G.G...G.......-----------------------------------------  28
J  95.7% (45/47)    IGHJ4*02     2    ------------------------------------------------------------..........T...................  31

                                                       
                                        V  T  V  S  S  
                    Query_11762  361  GGTCACCGTCTCGTCAG  377
J  95.7% (45/47)    IGHJ4*02     32   ............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_319521

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           324     8e-91
IGHD1-1*01                                                                                            12.2    34   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAGA	TCAGGAT	GTACAA	GTGCCAGGTGATCTGCGGATA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAGATCAGGATGTACAAGTGCCAGGTGATCTGCGGATATACTTCTACGGTTTGGACGTC	AADQDVQVPGDLRIYFYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	229	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  P  G  G  S  V  A  T  D  L  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_11763  1    ACCCTGTCCCTCACCTGCACTGTCCCTGGTGGCTCCGTCGCCACTGATCTTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (229/251)  IGHV4-61*01  49   ........................T..............AG..G..G.AG........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  L  Y  Y  N  G  V  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  R  D  S  S 
                    Query_11763  91   CTGGAGTGGATTGGATATCTCTATTACAATGGGGTCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAAGAGACTCGTCC  180
V  91.2% (229/251)  IGHV4-61*01  139  ..............G...A.........G....AG...........................................GT....A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  M  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  A  D  Q  D  V  Q  V  P 
                    Query_11763  181  AAGAACCAGTTCTCCCTGAAGATGAACTCTGTGACCGCTGCGGACTCGGCCGTATATTATTGTGCGGCAGATCAGGATGTACAAGTGCCA  270
V  91.2% (229/251)  IGHV4-61*01  229  .....................C...G...................A.......G.....C......AG...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-1*01   2    ------------------------------------------------------------------------------......------  7

                                      CDR3-IMGT-------------------------->                                 
                                       G  D  L  R  I  Y  F  Y  G  L  D  V  W  G  L  G  T  T  V  T  V  S  S 
                    Query_11763  271  GGTGATCTGCGGATATACTTCTACGGTTTGGACGTCTGGGGCCTAGGGACCACGGTCACCGTCTCCTCA  339
J  94.4% (51/54)    IGHJ6*02     9    ---------------....A.......A...............A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_328617

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           322     2e-90
IGHD2-8*01                                                                                            21.8    0.041
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-8*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCAA	AGTTAGGCGGACC	ATATTGTACTA	CTATAAATTGTAAT	CCCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGTTAGGCGGACCATATTGTACTACTATAAATTGTAATCCC	AKLGGPYCTTINCNP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	226	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  S  Y  W  M  H  W  V  R  Q  D  P  G  K  G  L  
                    Query_11764  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCGCCTTCAGTTCCTACTGGATGCACTGGGTCCGCCAAGATCCAGGGAAGGGGCTGG  90
V  91.9% (226/246)  IGHV3-74*01  47   ...............................A...A........AG..........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  P  D  G  R  V  Q  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11764  91   TGTGGGTCTCGCGTATTAATCCTGATGGACGTGTCCAAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.9% (226/246)  IGHV3-74*01  137  ..........A.........AG......GA..AG.AC..G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  M  Y  L  Q  M  N  G  L  R  A  E  D  T  S  V  Y  Y  C  A  K  L  G  G  P  Y  C  T  
                    Query_11764  181  AGAACACGATGTATCTGCAAATGAATGGTCTGAGAGCCGAGGACACGTCTGTGTACTACTGTGCAAAGTTAGGCGGACCATATTGTACTA  270
V  91.9% (226/246)  IGHV3-74*01  227  ........C................CA....................G.......T..........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD2-8*01   4    -------------------------------------------------------------------------------...........  14

                                      ---------------->                                  
                                      T  I  N  C  N  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11764  271  CTATAAATTGTAATCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (37/37)   IGHJ5*02     15   --------------.....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_118730

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           325     3e-91
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	AGGAATAGGCTGGAGCC	CTATGATAATAGTGGTT	GCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAAGGAATAGGCTGGAGCCCTATGATAATAGTGGTTGCCTTGACTAC	ARRNRLEPYDNSGCLDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  N  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11765  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAATAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.9% (228/248)  IGHV3-30*03  47   ...................................A......G...C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  F  D  G  G  N  K  D  Y  A  D  S  V  R  G  R  F  S  I  S  R  D  N  S  
                    Query_11765  91   AGTGGCTGGCAGTTATATCATTTGATGGAGGTAACAAAGACTATGCAGACTCCGTGAGGGGCCGATTCTCCATCTCCAGAGACAATTCCA  180
V  91.9% (228/248)  IGHV3-30*03  137  .....G...............A.......A....T...T..................A..........A.....................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      N  N  T  V  Y  L  Q  L  N  S  L  S  A  G  D  T  A  V  Y  Y  C  A  R  R  N  R  L  E  P  Y  
                    Query_11765  181  ACAACACAGTATATCTGCAATTGAACAGCCTGAGCGCAGGGGACACGGCTGTCTATTACTGTGCGCGAAGGAATAGGCTGGAGCCCTATG  270
V  91.9% (228/248)  IGHV3-30*03  227  .G.....GC.G.........A.............A..T.A............G............A..----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  94.1% (16/17)    IGHD3-22*01  7    -------------------------------------------------------------------------------------.....  11

                                      GT-------------------->                                  
                                      D  N  S  G  C  L  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_11765  271  ATAATAGTGGTTGCCTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  327
D  94.1% (16/17)    IGHD3-22*01  12   ...G........---------------------------------------------  23
J  97.6% (41/42)    IGHJ4*02     7    ---------------...............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_328619

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*02                                                                                            322     2e-90
IGHD2-15*01                                                                                           23.8    0.012
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*02	IGHD2-15*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGGGACTGTGCTATG	GGTGGTAGTTGCTAC	CTCGGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGGGACTGTGCTATGGGTGGTAGTTGCTACCTCGGGGACTAC	ARRDCAMGGSCYLGDY	266	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	154	24	7	2	15	29.2
FR3-IMGT	155	265	114	102	9	3	89.5
CDR3-IMGT (germline)	266	271	6	6	0	0	100
Total	N/A	N/A	288	249	21	18	86.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  *  A  E  V  K  K  P  G  A  S  V  N  V  S  C  K  A  S  G  Y  T  F  T  T  Y 
                    Query_11766  2    CAGCTGGTGCAGTCTTGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAATGTTTCCTGCAAGGCTTCTGGATACACCTTCACTACATAT  91
V  86.5% (249/288)  IGHV1-3*02   7    ...............G.G................................G..................................GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       P  I  H  W  V  R  Q  A  P  G  Q  R  L  E  W  L  G  W  I  N  G                    Y  S  Q 
                    Query_11766  92   CCTATACATTGGGTGCGCCAGGCCCCCGGACAGAGGCTTGAGTGGCTGGGGTGGATCAACGGT------------------TATTCACAG  163
V  86.5% (249/288)  IGHV1-3*02   97   G....G..........................A............A....A....G.....C.GGCAATGGTAACACAAAA.........  186
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  S  N  A  G  N  G  N  T  K  Y  S  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       E  F  Q  G  R  V  I  I  S  S  D  T  S  A  T  T  S  Y  M  E  L  S  S  L  R  S  E  D  T  A 
                    Query_11766  164  GAGTTCCAGGGCAGAGTCATCATTTCCAGTGACACATCCGCGACCACTTCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCT  253
V  86.5% (249/288)  IGHV1-3*02   187  ...................C....A....G.............G...AG....................................T....  276
                                       E  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  M  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  R  D  C  A  M  G  G  S  C  Y  L  G  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_11766  254  GTATATTATTGTGCGAGAAGGGACTGTGCTATGGGTGGTAGTTGCTACCTCGGGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  343
V  86.5% (249/288)  IGHV1-3*02   277  ..G.....C.........------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  93.3% (14/15)    IGHD2-15*01  14   ---------------------------------........C......------------------------------------------  28
J  100.0% (39/39)   IGHJ4*02     9    ------------------------------------------------------....................................  44

                                         
                                       S 
                    Query_11766  344  TCA  346
J  100.0% (39/39)   IGHJ4*02     45   ...  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_328618

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           375     3e-106
IGHD3-22*01                                                                                           37.2    1e-06 
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAG	TTACTTTGATAGTAGTGGTTAT	GCTCAGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTACTTTGATAGTAGTGGTTATGCTCAGGACGGTATGGACGTC	ARESYFDSSGYAQDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11767  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (245/250)  IGHV3-21*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  S  I  S  G  S  S  N  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11767  91   ACTGGGTCTCATCCATTAGTGGTAGTAGTAATTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.0% (245/250)  IGHV3-21*01  137  .G..................A.........G...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  R  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  S  Y  F  D  S  S  
                    Query_11767  181  AGAACTCACTGTATCTGCAAATGAACAGGCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAAAGTTACTTTGATAGTAGTG  270
V  98.0% (245/250)  IGHV3-21*01  227  ............................C.........................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.5% (21/22)    IGHD3-22*01  4    -------------------------------------------------------------------------.....A...........  20

                                      IMGT--------------------->                                 
                                      G  Y  A  Q  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11767  271  GTTATGCTCAGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  95.5% (21/22)    IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_319520

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           335     4e-94
IGHD4-17*01                                                                                           21.8    0.041
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTCGGA	TGACTTCGGTGACT	TCCGGGGCAG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATTCGGATGACTTCGGTGACTTCCGGGGCAGCTGGTTCGGCCCC	VKDSDDFGDFRGSWFGP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  I  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11768  1    GGTCCCTGAGACTTTCCTGTTCAGCCTCTGGATTCACCTTCAATATCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  92.8% (232/250)  IGHV3-64*05  47   .............C............................G..G......T.....................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  G  I  S  G  N  G  H  R  T  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11768  91   AATATGTTTCAGGTATCAGTGGTAATGGGCATAGAACATACTATGGAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-64*05  137  ............C...T...A........GG...C........C.C............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  M  F  F  L  Q  M  S  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  D  S  D  D  F  G  D  
                    Query_11768  181  AGAACATGTTCTTTCTTCAAATGAGCAGTCTGAGAGCTGAGGACACGGCTCTGTATTACTGTGTGAAAGATTCGGATGACTTCGGTGACT  270
V  92.8% (232/250)  IGHV3-64*05  227  ......C.C.G.A.G...................................G...................--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  92.9% (13/14)    IGHD4-17*01  1    ----------------------------------------------------------------------------.....A........  14

                                      GT-------------------->                                  
                                      F  R  G  S  W  F  G  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11768  271  TCCGGGGCAGCTGGTTCGGCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  97.9% (46/47)    IGHJ5*02     5    ----------........A......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_349538

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     3e-93
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGGGTCCT	TATAGTGGGAGC	CCGCAAGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACTTC	AKPGPYSGSPQGYFDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11769  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTTCGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (230/248)  IGHV3-23*01  47   .............................................G..AT........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  T  E  T  G  R  N  S  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  
                    Query_11769  91   AGTGGGTCTCAACTATTACTGAGACTGGTCGTAATTCATACTACGCAGACTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCA  180
V  92.7% (230/248)  IGHV3-23*01  137  ...........G......G..GT.G....G...GCA............................G....C...............T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  G  P  Y  S  G  S  
                    Query_11769  181  AGAACACACTGTATCTGCAAATGAACACCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAACCGGGTCCTTATAGTGGGAGCC  270
V  92.7% (230/248)  IGHV3-23*01  227  .......G...................G........................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD1-26*01  3    -----------------------------------------------------------------------------............-  14

                                      T------------------>                                  
                                      P  Q  G  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11769  271  CGCAAGGGTACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.8% (45/46)    IGHJ4*02     3    --------..........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_229954

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            322     2e-90
IGHD3-9*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAAGAGCGGTACGCATTGAT	ACTGTTTATTA	CGAGGGGCCTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAAGAGCGGTACGCATTGATACTGTTTATTACGAGGGGCCTCCTGACTAC	ATRAVRIDTVYYEGPPDY	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  N  S  N  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_11770  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGTCCATCAGTAATAGTAACTGGTGGACTTGGATTCGCCAGCCCCCAGGAAAGGGGCTG  90
V  92.2% (225/244)  IGHV4-4*01   49   ................................C........C.G..............G....G.C..............G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  I  D  S  G  S  T  N  Y  N  P  S  L  M  S  R  V  I  I  S  L  D  K  S  K 
                    Query_11770  91   GAGTGGATTGGGGAAATTATTGATAGTGGGAGCACCAACTACAACCCGTCCCTCATGAGTCGAGTCATCATCTCACTAGACAAGTCCAAG  180
V  92.2% (225/244)  IGHV4-4*01   139  .................CTA.C.................................A...........C...A...G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                       N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  T  R  A  V  R  I  D  T  V 
                    Query_11770  181  AATCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGACAAGAGCGGTACGCATTGATACTGTT  270
V  92.2% (225/244)  IGHV4-4*01   229  ..C..............G....G................................G........--------------------------  292
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  90.9% (10/11)    IGHD3-9*01   17   ------------------------------------------------------------------------------------....G.  22

                                      GT--------------------->                                  
                                       Y  Y  E  G  P  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11770  271  TATTACGAGGGGCCTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  90.9% (10/11)    IGHD3-9*01   23   .....-----------------------------------------------------  27
J  100.0% (41/41)   IGHJ4*02     8    -----------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_181551

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           322     2e-90
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_11771  1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_11771  91   CTAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-61*08  139  ..G..................T..T................C.................G.......TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N 
                    Query_11771  181  AGGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAAC  270
V  91.2% (228/250)  IGHV4-61*08  229  .A.................A.....GC..........................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G..G.....G.  22

                                      3-IMGT----------------------->                                  
                                       C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_11771  271  TGCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGCCACCGTCTCCTCAG  334
D  86.4% (19/22)    IGHD2-15*01  23   ......----------------------------------------------------------  28
J  93.0% (40/43)    IGHJ4*02     6    ---------------------......T.C...................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_181550

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     3e-90
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	242	26	6	88.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_11772  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.3% (242/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_11772  91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.3% (242/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_11772  181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.3% (242/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_11772  271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.3% (242/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_181553

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           422     2e-120
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGGAT	GGGAGTTA	CGAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATGGGAGTTACGAAACTTTGACTAC	ARGGWELRNFDY	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	294	282	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 
                    Query_11773  3    GAGGTCCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACAGCTTCACC  92
V  95.9% (282/294)  IGHV5-51*03  1    .....G...................C.............................................T..............T...  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  T  Y 
                    Query_11773  93   AACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCACATAC  182
V  95.9% (282/294)  IGHV5-51*03  91   .G...............................................................................A...G....  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  S  F  R  G  Q  V  T  I  S  A  D  M  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D 
                    Query_11773  183  AGCCCGTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACATGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGAC  272
V  95.9% (282/294)  IGHV5-51*03  181  .............A..........................A........G........................................  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  I  Y  F  C  A  R  G  G  W  E  L  R  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11773  273  ACCGCCATCTATTTCTGTGCGAGAGGGGGATGGGAGTTACGAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  95.9% (282/294)  IGHV5-51*03  271  ........G....A..........----------------------------------------------------------------  294
                                       T  A  M  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD3-10*01  17   -------------------------------........-------------------------------------------------  24
J  100.0% (45/45)   IGHJ4*02     4    -------------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_181552

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           394     6e-112
IGHD4-17*01                                                                                           23.8    0.012 
IGHJ3*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCACTACAACGTT	TACGGTGACTAC	GGCGT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCACTACAACGTTTACGGTGACTACGGCGTTGATGCTTTTGATATC	ARDHYNVYGDYGVDAFDI	261	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	23	1	0	95.8
FR2-IMGT	75	125	51	50	1	0	98
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	111	3	0	97.4
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	260	8	0	97


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  T  I  S  S  Y  Y  W  S  W  I  R  
                    Query_11774  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCACCATCAGTAGTTACTACTGGAGCTGGATCCGGC  90
V  97.0% (260/268)  IGHV4-59*01  26   ................T.......................................T.................................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  V  G  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_11774  91   AGCCCCCAGGGAAGGGACTGGAGTGGGTTGGGTATATCTATTACAGAGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  97.0% (260/268)  IGHV4-59*01  116  ..........................A...................T....G......................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  A  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  
                    Query_11774  181  TATCAGTAGACACGGCCAAGAATCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATC  270
V  97.0% (260/268)  IGHV4-59*01  206  ..............T.......C...................G.............................................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -------------CDR3-IMGT--------------------->                                  
                                      H  Y  N  V  Y  G  D  Y  G  V  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11774  271  ACTACAACGTTTACGGTGACTACGGCGTTGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  348
D  100.0% (12/12)   IGHD4-17*01  5    -----------............-------------------------------------------------------  16
J  100.0% (50/50)   IGHJ3*02     1    ----------------------------..................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_181554

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           14.1    8.7  
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTCAA	GGGGGAG	ATGGGTCACCCCCGGGTTCA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTCAAGGGGGAGATGGGTCACCCCCGGGTTCAGATGCTTTTGATATC	AKVQGGDGSPPGSDAFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  T  F  R  N  Y  V  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11775  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTAGATTCACCTTTAGGAACTATGTCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-23*01  47   .............................G.............C.G.....C.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  A  S  G  V  S  T  Y  Y  A  D  S  V  K  D  R  F  T  I  S  R  D  N  S  
                    Query_11775  91   AGTGGGTCTCAGCGATTAGTGCTAGTGGTGTTAGCACATACTACGCAGACTCCGTGAAGGACCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-23*01  137  .............T.......G........G.............................G.............................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  P  S  V  E  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  V  Q  G  G  D  G  S  
                    Query_11775  181  AGAACACGCCGTCTGTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAAAGTTCAAGGGGGAGATGGGTCAC  270
V  94.4% (235/249)  IGHV3-23*01  227  .........T..A.C..C.......................................A...........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-16*01  18   --------------------------------------------------------------------------.......---------  24

                                      IMGT--------------------->                               
                                      P  P  G  S  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  
                    Query_11775  271  CCCCGGGTTCAGATGCTTTTGATATCTGGGGCCAGGGGACAATGGTCACCGTCTCTT  327
J  97.8% (45/46)    IGHJ3*02     2    -----------.......................A......................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_181557

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           349     2e-98
IGHD5-12*01                                                                                           18.0    0.60 
IGHJ2*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGAAATGTATGAT	TATAGTGGC	ACAATATAT	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGAAATGTATGATTATAGTGGCACAATATATTGGTACTTCGATCTC	ARQEMYDYSGTIYWYFDL	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  S  R  S  Y  P  W  G  W  V  R  Q  P  P  R  K  G 
                    Query_11776  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGCAGTAGGAGCTACCCCTGGGGCTGGGTCCGCCAGCCCCCACGGAAGGGG  90
V  94.4% (237/251)  IGHV4-39*01  49   ......................................C........T..T...TA..........A..............G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  N  S  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  H  T  S 
                    Query_11776  91   CTGGAGTGGATTGGGACTATCTATAATAGTGGGAGGACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTACACACGTCG  180
V  94.4% (237/251)  IGHV4-39*01  139  ................G.......T..........C.............................................G.......C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       N  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  E  M  Y  D  Y  S 
                    Query_11776  181  AACAACCAGTTCTCCCTGCAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACAAGAAATGTATGATTATAGT  270
V  94.4% (237/251)  IGHV4-39*01  229  ..G...............A....................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD5-12*01  6    ------------------------------------------------------------------------------------......  11

                                      -IMGT--------------------->                                  
                                       G  T  I  Y  W  Y  F  D  L  W  G  R  G  S  L  V  T  V  S  S  
                    Query_11776  271  GGCACAATATATTGGTACTTCGATCTCTGGGGCCGTGGCTCCCTGGTCACTGTCTCCTCAG  331
D  100.0% (9/9)     IGHD5-12*01  12   ...----------------------------------------------------------  14
J  98.0% (48/49)    IGHJ2*01     5    ------------...........................A.....................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_181556

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           294     6e-82
IGHD4-17*01                                                                                           12.2    32   
IGHJ2*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACAGTTTTTCTCCGCCGTCG	GACTAC	TT	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATAACAGTTTTTCTCCGCCGTCGGACTACTTCTTCGATCTC	VRDNSFSPPSDYFFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  K  N  Y  N  M  N  W  V  R  Q  A  P  G  K  R  L  
                    Query_11777  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAAGAACTACAACATGAACTGGGTCCGCCAGGCTCCAGGGAAGCGGCTGG  90
V  87.6% (219/250)  IGHV3-21*01  47   ....................G.....................GT.G...T.G...............................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  G  R  N  N  D  I  H  Y  A  D  S  M  K  G  R  I  T  I  S  R  D  N  A  
                    Query_11777  91   AGTGGGTCTCATCGATTAGAGGTAGAAACAATGACATCCACTACGCAGACTCAATGAAGGGCCGAATCACCATCTCCAGAGACAACGCCA  180
V  87.6% (219/250)  IGHV3-21*01  137  .............C.....TA....T.GT.G.T....AT..............G...........T........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  N  S  L  Y  L  H  M  H  S  L  G  A  E  D  T  A  I  Y  F  C  V  R  D  N  S  F  S  P  P  
                    Query_11777  181  ACAACTCACTCTATCTCCACATGCACAGCCTGGGAGCCGAGGACACGGCTATCTATTTCTGCGTCAGAGATAACAGTTTTTCTCCGCCGT  270
V  87.6% (219/250)  IGHV3-21*01  227  .G........G.....G..A...A........A.................G.G....A...T.CG.....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      T------------------>                                  
                                      S  D  Y  F  F  D  L  W  G  R  G  T  P  V  S  V  S  S  
                    Query_11777  271  CGGACTACTTCTTCGATCTCTGGGGCCGTGGCACCCCAGTCTCTGTCTCCTCAG  324
D  100.0% (6/6)     IGHD4-17*01  2    --......----------------------------------------------  7
J  93.2% (41/44)    IGHJ2*01     10   ----------..........................TG...A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_181559

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           336     1e-94
IGHD3-10*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCCGCCGC	TTCGGGGAGTT	GACGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCCGCCGCTTCGGGGAGTTGACGCTTGACTAC	ARDGRRFGELTLDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  S  V  S  T  N  Y  M  S  W  F  R  Q  A  P  G  K  G  L  
                    Query_11778  1    GGTCCCTGAGACTCTCCTGTGCAGTTTCTGGGTTCAGCGTCAGTACCAATTACATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-53*01  47   ........................CC..........C........G...C............G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  L  Y  S  G  G  V  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_11778  91   AGTGGGTCTCAGTTCTTTATAGTGGTGGTGTCACATTCTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.5% (231/247)  IGHV3-53*01  137  ..............A.......C......AG.....A.....................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  I  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  R  R  F  G  E  L  
                    Query_11778  181  ACACATTGTATCTTCAAATGAATATCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGAGATGGCCGCCGCTTCGGGGAGTTGA  270
V  93.5% (231/247)  IGHV3-53*01  227  ....GC................C.G..............................C...........-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD3-10*01  13   -----------------------------------------------------------------------------...........--  23

                                      ---------->                                  
                                      T  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11778  271  CGCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (42/42)   IGHJ4*02     7    ---..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_237663

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD1-26*01                                                                                           14.1    9.3   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTGTTTTCTGGGGC	CTACTAC	CTTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGTTTTCTGGGGCCTACTACCTTCTTGACTAC	ARVFSGAYYLLDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  T  A  F  G  Y  S  F  T  S  Y
                    Query_11779  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTACGGCTTTTGGATACAGCTTTACCAGTTA  90
V  95.8% (277/289)  IGHV5-51*03  6    ..............................................................A..G..C..................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  R  D  G  E  T  R  Y  S  P
                    Query_11779  91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTCGTGACGGTGAAACCAGATACAGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   C...............................................................G.....TC...T..............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_11779  181  GTCCTTCCAAGGCCAGGTCAGCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  ....................C....................................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                
                                        M  Y  Y  C  A  R  V  F  S  G  A  Y  Y  L  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11779  271  CATGTATTATTGTGCGAGAGTGTTTTCTGGGGCCTACTACCTTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  354
V  95.8% (277/289)  IGHV5-51*03  276  .........C.........-----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                  
D  100.0% (7/7)     IGHD1-26*01  14   ---------------------------------.......--------------------------------------------  20
J  100.0% (40/40)   IGHJ4*02     7    --------------------------------------------........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_152382

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     1e-87
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGTGAGGAAGGA	TACTATGATACTAGTGGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGTGAGGAAGGATACTATGATACTAGTGGTTATTCGGACTAT	AKDGEEGYYDTSGYSDY	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	45	6	0	88.2
CDR2-IMGT	100	123	24	20	4	0	83.3
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	232	216	16	0	93.1


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  T  P  G  K  G  L  E  W  V  S  T  V  
                    Query_11780  14   GTGCAGCCTCTGGATTCACCTTTAGTAGATATGCCATGTCCTGGGTCCGCCAGACTCCAGGGAAGGGCCTGGAGTGGGTCTCAACAGTGA  103
V  93.1% (216/232)  IGHV3-23*01  65   .........................C..C.........AG.............G.............G...............G.TA.T.  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  G  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_11780  104  GTGGTAGTGGAGGTGGCACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATTTGC  193
V  93.1% (216/232)  IGHV3-23*01  155  ..........T...A..........C............................................................C...  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------------CDR3-IMGT----------------
                                      Q  M  N  S  L  R  T  E  D  T  A  I  Y  Y  C  A  K  D  G  E  E  G  Y  Y  D  T  S  G  Y  S  
                    Query_11780  194  AAATGAACAGCCTGAGAACCGAGGACACGGCCATATATTACTGTGCGAAAGATGGTGAGGAAGGATACTATGATACTAGTGGTTATTCGG  283
V  93.1% (216/232)  IGHV3-23*01  245  .................G..............G...................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  95.5% (21/22)    IGHD3-22*01  5    -----------------------------------------------------------------..........G...........---  26
J  97.5% (39/40)    IGHJ4*02     9    -----------------------------------------------------------------------------------------.  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11780  284  ACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  97.5% (39/40)    IGHJ4*02     10   ....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_233586

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           358     4e-101
IGHD1-7*01                                                                                            16.1    2.2   
IGHJ2*01                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-7*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TCTCAGGGAGTCGG	GGAACTAC	GGAG	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTCTCAGGGAGTCGGGGAACTACGGAGTGGTACTTCGATCTC	ARVSGSRGTTEWYFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11781  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACTTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-74*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  S  R  M  K  S  D  G  S  S  T  S  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  A  
                    Query_11781  91   CGTGGGTCTCACGTATGAAAAGCGATGGAAGTAGCACAAGCTACGCGGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (239/249)  IGHV3-74*01  137  T...............T..T..T.....G...........................A.................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  S  G  S  R  G  T  
                    Query_11781  181  GGAACACGTTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGTCTCAGGGAGTCGGGGAACTA  270
V  96.0% (239/249)  IGHV3-74*01  227  A.......C............................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-7*01   10   -----------------------------------------------------------------------------------.......  16

                                      T------------------>                                  
                                      T  E  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11781  271  CGGAGTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  100.0% (8/8)     IGHD1-7*01   17   .-----------------------------------------------------  17
J  100.0% (49/49)   IGHJ2*01     5    -----.................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_233584

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           324     8e-91
IGHD2-15*01                                                                                           21.8    0.040
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGAC	TAGTGGTGGGAGCT	ACAGTTGGGA	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGACTAGTGGTGGGAGCTACAGTTGGGATTTTGATCTC	AKGTSGGSYSWDFDL	239	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	19	5	0	79.2
FR2-IMGT	50	100	51	49	2	0	96.1
CDR2-IMGT	101	124	24	22	2	0	91.7
FR3-IMGT	125	238	114	111	3	0	97.4
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	231	219	12	0	94.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  E  F  T  F  S  S  Y  S  M  S  W  V  R  H  A  P  G  K  G  L  E  W  V  S  A  I  
                    Query_11782  15   GTGCAGCCTCTGAATTTACCTTTAGTAGCTATAGCATGAGTTGGGTCCGCCACGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCTATTG  104
V  94.8% (219/231)  IGHV3-23*01  65   ............G...C........C......GC......C...........G....................................A  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      V  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_11782  105  TTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGG  194
V  94.8% (219/231)  IGHV3-23*01  155  G........................................................................................C  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      E  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  G  T  S  G  G  S  Y  S  W  D  F  D  L  
                    Query_11782  195  AAATGAACAGCCTGAGAGTCGAGGACACGGCCGTTTATTACTGTGCGAAAGGGACTAGTGGTGGGAGCTACAGTTGGGATTTTGATCTCT  284
V  94.8% (219/231)  IGHV3-23*01  245  ..................C...............A................---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  92.9% (13/14)    IGHD2-15*01  10   -------------------------------------------------------.........T....---------------------  23
J  97.7% (43/44)    IGHJ3*01     7    -------------------------------------------------------------------------------.......G...  17

                                                                       
                                      W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11782  285  GGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  317
J  97.7% (43/44)    IGHJ3*01     18   .................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_233585

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           353     9e-100
IGHD4-17*01                                                                                           18.0    0.57  
IGHJ4*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	AGGGGAT	TACGGTGAC	CGAAAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGATTACGGTGACCGAAATCTACTTTGACTAC	AREGITVTEIYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	235	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  E  Y  F  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_11783  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGAATACTTCTGGAGCTGGATCCGCCAGACCCCAGGGAAGGGGCTGGAG  90
V  96.3% (235/244)  IGHV4-34*01  49   ...........................................GT....A...................C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  D  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_11783  91   TGGATTGGAGAAATCAATGATAGTGGAAGCACCAACTACAACCCGTCCCTCCAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAGC  180
V  96.3% (235/244)  IGHV4-34*01  139  ........G.........C................................A....................................A.  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  I  T  V  T  E  I  Y 
                    Query_11783  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAGAGGGGATTACGGTGACCGAAATCTAC  270
V  96.3% (235/244)  IGHV4-34*01  229  ...............................................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD4-17*01  5    -----------------------------------------------------------------------.........----------  13
J  100.0% (47/47)   IGHJ4*02     2    --------------------------------------------------------------------------------------....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11783  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (47/47)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_233582

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           372     2e-105
IGHD4-17*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAGA	TACGGTGACT	CCAGGGGGTTGTCG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAGATACGGTGACTCCAGGGGGTTGTCGTAC	ARERYGDSRGLSY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11784  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.6% (244/250)  IGHV3-33*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  R  K  Y  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  D  S  
                    Query_11784  91   AGTGGGTGGCAGTTATATGGTACGATGGAAGTAGGAAATACTATGCAGACTCCGTGACGGGCCGATTCACCATCTCCAGAGACGATTCCA  180
V  97.6% (244/250)  IGHV3-33*01  137  ......................T..........AT......................A.........................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  R  Y  G  D  S  R  
                    Query_11784  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGAGAGATACGGTGACTCCAGGG  270
V  97.6% (244/250)  IGHV3-33*01  227  ....................................................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD4-17*01  5    --------------------------------------------------------------------------..........------  14

                                      ---------->                                  
                                      G  L  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11784  271  GGTTGTCGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (37/37)   IGHJ4*02     12   --------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_229950

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            400     9e-114
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              69.9    4e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCG	GCAGTGGCTGGT	TCGGGGACC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCGGCAGTGGCTGGTTCGGGGACCTTGACTAC	ARDLGSGWFGDLDY	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	72	3	0	96
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	105	9	0	92.1
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	276	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  A  F  T 
                    Query_11785  4    CAGGTCCAGCTTGTGCAGTCTGGGGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACGCCTTCACC  93
V  93.2% (276/296)  IGHV1-2*04   1    .....G.....G.................G...................................................A........  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       A  Y  Y  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  Y  T  G  A  T  N  Y 
                    Query_11785  94   GCCTACTATATCCACTGGGTGCGACAGGCCCCCGGACAAGGGCTTGAGTGGATGGGTTGGATCAACCCTTACACTGGTGCCACAAACTAT  183
V  93.2% (276/296)  IGHV1-2*04   91   .G.........G....................T.......................A............A...G.....G..........  180
                                       G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  F  Q  D  W  V  T  L  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  K  S  D  D 
                    Query_11785  184  GCACAGAACTTTCAAGACTGGGTCACCTTGACCAGGGACACGTCAATCAGCACTGCCTACATGGAACTGAGCAGGCTGAAATCTGACGAC  273
V  93.2% (276/296)  IGHV1-2*04   181  ........G.....G.G..........A................C........A...........G.............G..........  270
                                       A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       S  A  V  Y  Y  C  A  R  D  L  G  S  G  W  F  G  D  L  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_11785  274  TCGGCCGTGTATTACTGTGCGAGAGATCTCGGCAGTGGCTGGTTCGGGGACCTTGACTACTGGGGCCAGGGAACACTAGTCACCGTCTCC  363
V  93.2% (276/296)  IGHV1-2*04   271  A.........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (12/12)   IGHD6-19*01  8    -------------------------------............-----------------------------------------------  19
J  95.2% (40/42)    IGHJ4*02     7    ----------------------------------------------------......................C..G............  44

                                          
                                       S  
                    Query_11785  364  TCAG  367
J  95.2% (40/42)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_233580

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD3-10*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGGAT	GGGAGTTA	CGAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATGGGAGTTACGAAACTTTGACTAC	ARGGWELRNFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_11786  1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACAGCTTCACCAACTA  90
V  96.2% (278/289)  IGHV5-51*03  6    ....................C.............................................T..............T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  T  Y  S  P
                    Query_11786  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCACATACAGCCC  180
V  96.2% (278/289)  IGHV5-51*03  96   ............................................................................A...G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  M  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11786  181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACATGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (278/289)  IGHV5-51*03  186  ........A..........................A........G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  F  C  A  R  G  G  W  E  L  R  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11786  271  CATCTATTTCTGTGCGAGAGGGGGATGGGAGTTACGAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.2% (278/289)  IGHV5-51*03  276  ...G....A..........----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD3-10*01  17   --------------------------........-------------------------------------------------  24
J  100.0% (45/45)   IGHJ4*02     4    --------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_233581

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           37.2    1e-06 
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAG	TTACTTTGATAGTAGTGGTTAT	GCTCAGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTACTTTGATAGTAGTGGTTATGCTCAGGACGGTATGGACGTC	ARESYFDSSGYAQDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11787  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  S  I  S  S  S  S  N  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11787  91   ACTGGGTCTCATCCATTAGTAGTAGTAGTAATTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  .G............................G...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  R  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  S  Y  F  D  S  S  
                    Query_11787  181  AGAACTCACTGTATCTGCAAATGAACAGGCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAAAGTTACTTTGATAGTAGTG  270
V  98.4% (246/250)  IGHV3-21*01  227  ............................C.........................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.5% (21/22)    IGHD3-22*01  4    -------------------------------------------------------------------------.....A...........  20

                                      IMGT--------------------->                                 
                                      G  Y  A  Q  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11787  271  GTTATGCTCAGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  95.5% (21/22)    IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_164257

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           311     4e-87
IGHD1-1*01                                                                                            14.1    8.5  
IGHJ2*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGCGGTTGAGAGATG	GGTACAA	TTTTCTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGCGGTTGAGAGATGGGTACAATTTTCTCGACTGGTACTTCGATGTC	ATRLRDGYNFLDWYFDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	29	28	22	6	0	78.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        S  L  R  L  S  C  Q  A  S  G  Y  T  F  N  N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E
                    Query_11788  2    GTCCCTGAGACTCTCCTGTCAGGCTTCTGGATACACCTTCAACAATTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGA  91
V  90.6% (222/245)  IGHV5-51*01  48   ...T....AGA........A...G...........G...T.C..GC............................................  137
                                        S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E

                                      ------------><-------CDR2-IMGT------><----------------------------------------------------
                                        W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P  S  F  R  G  Q  V  T  I  S  A  D  T  S  L
                    Query_11788  92   GTGGATGGGTATCATCTATCCTGGTGACTCTGATACCACATACAGTCCGTCCTTCCGAGGCCAAGTCACCATCTCAGCCGACACGTCCCT  181
V  90.6% (222/245)  IGHV5-51*01  138  .........G............................G......C..........A......G...................A....A.  227
                                        W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I

                                      FR3-IMGT----------------------------------------------------><--------------------CDR3-IMG
                                        R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  T  Y  Y  C  A  T  R  L  R  D  G  Y  N  F
                    Query_11788  182  CCGAACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGCCACATATTATTGTGCGACGCGGTTGAGAGATGGGTACAATTT  271
V  90.6% (222/245)  IGHV5-51*01  228  .A.C..............................................TG.....C.......-------------------------  292
                                        S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M  Y  Y  C  A                           
D  100.0% (7/7)     IGHD1-1*01   1    --------------------------------------------------------------------------------.......---  7

                                      T-------------------->                                  
                                        L  D  W  Y  F  D  V  W  G  R  G  T  Q  V  I  V  A  S  
                    Query_11788  272  TCTCGACTGGTACTTCGATGTCTGGGGCCGTGGCACCCAGGTCATTGTCGCGTCAG  327
J  90.2% (46/51)    IGHJ2*01     3    -----..............C..................T.....C....T.C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_233588

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            364     5e-103
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	CGTTCGG	ATGGTTCGGGGAGTT	CCTA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGCGTTCGGATGGTTCGGGGAGTTCCTAGGTATGGACGTC	AKAFGWFGEFLGMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  K  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11789  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAAAGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.8% (241/249)  IGHV3-9*01   47   ....................................C....G.T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  R  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11789  91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGGATAGGCTATGCGGATTCTGTGAAGGGCCGATTCACCATCTCAAGAGACAACGCCA  180
V  96.8% (241/249)  IGHV3-9*01   137  ..................................C..............C..........................C.............  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  L  Y  Y  C  A  K  A  F  G  W  F  G  E  
                    Query_11789  181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGCGAGGTGAGGACACGGCCTTGTATTACTGTGCAAAAGCGTTCGGATGGTTCGGGGAGT  270
V  96.8% (241/249)  IGHV3-9*01   227  ................................A...C................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD3-10*01  9    ----------------------------------------------------------------------------..............  22

                                      ---------------->                                 
                                      F  L  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11789  271  TCCTAGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
D  100.0% (15/15)   IGHD3-10*01  23   .-------------------------------------------------  23
J  100.0% (45/45)   IGHJ6*02     18   -----.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_152385

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-3*01                                                                                            37.2    1e-06
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTCGGGGGACACGA	ATTACGATTTTTGGAGTGG	GGGTGTTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATTCGGGGGACACGAATTACGATTTTTGGAGTGGGGGTGTTCTTGATATC	AKDSGDTNYDFWSGGVLDI	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11790  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGTTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ..............................................C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  F  N  T  N  Y  A  E  S  E  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11790  91   AGTGGGTCTCAGGTATTAGTGGCAGTGGTTTTAATACAAACTATGCAGAGTCCGAGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  ............C.........T......GG..GC...T....C.....C....T...............................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  D  S  G  D  T  N  Y  
                    Query_11790  181  AGAACACTCTGTATCTACAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTATATTACTGTGCGAAAGATTCGGGGGACACGAATTACG  270
V  93.6% (234/250)  IGHV3-23*01  227  .......G........G...................C.................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (19/19)   IGHD3-3*01   3    ------------------------------------------------------------------------------------......  8

                                      -IMGT----------------------->                                  
                                      D  F  W  S  G  G  V  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11790  271  ATTTTTGGAGTGGGGGTGTTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  333
D  100.0% (19/19)   IGHD3-3*01   9    .............--------------------------------------------------  21
J  100.0% (42/42)   IGHJ3*02     9    ---------------------..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_324049

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            363     2e-102
IGHD6-19*01                                                                                           18.0    0.67  
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGTAAT	CAGTGGCTG	CTCCCTGCCCCTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTAATCAGTGGCTGCTCCCTGCCCCTGACTACGGTATGGACGTC	ARDGNQWLLPAPDYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	261	29	0	90


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y 
                    Query_11791  2    CAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAAGTTTCCTGCAAGGCCTCTGGATACACCTTCACTACGTAT  91
V  90.0% (261/290)  IGHV1-3*01   7    .....T............................................G..............T...................GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       P  I  H  W  V  R  Q  A  P  G  Q  R  P  E  W  M  G  W  V  I  T  G  N  G  N  I  E  Y  S  Q 
                    Query_11791  92   CCTATACACTGGGTGCGCCAGGCCCCCGGACAAAGGCCTGAGTGGATGGGCTGGGTCATCACTGGCAATGGAAACATAGAATATTCACAG  181
V  90.0% (261/290)  IGHV1-3*01   97   G....G..T............................T............A...A...A.G..........T....C.A...........  186
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  F  Q  G  R  V  T  I  A  S  D  S  S  A  S  T  S  Y  M  E  L  S  S  L  K  S  D  D  T  A 
                    Query_11791  182  AGATTCCAGGGCAGAGTCACCATTGCCAGTGACTCGTCCGCGAGTACTTCCTACATGGAGCTGAGTAGCCTGAAATCTGACGACACGGCT  271
V  90.0% (261/290)  IGHV1-3*01   187  .AG.....................A....G...A.A........C..AG................C.......G......A.........  276
                                       K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  G  N  Q  W  L  L  P  A  P  D  Y  G  M  D  V  W  G  Q  G  T  S  V  T 
                    Query_11791  272  GTTTATTACTGTGCGAGAGATGGTAATCAGTGGCTGCTCCCTGCCCCTGACTACGGTATGGACGTCTGGGGCCAAGGGACCTCGGTCACC  361
V  90.0% (261/290)  IGHV1-3*01   277  ..G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD6-19*01  9    ---------------------------.........------------------------------------------------------  17
J  98.0% (48/49)    IGHJ6*02     13   -------------------------------------------------................................A........  53

                                              
                                       V  S  S
                    Query_11791  362  GTCTCCTC  369
J  98.0% (48/49)    IGHJ6*02     54   ........  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_263088

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         300     9e-84
IGHD3-9*01                                                                                            14.1    8.7  
IGHJ2*01                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGACCGATAC	TGACTGG	GGTGGTCACACGGGGCTCTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACCGATACTGACTGGGGTGGTCACACGGGGCTCTTCTGGTACTTCGATCTC	AKTDTDWGGHTGLFWYFDL	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	218	26	0	89.3


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  V  V  S  G  Y  S  I  N  N  G  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  L 
                    Query_11792    1    ACCCTGTCCCTCACCTGCGTTGTGTCTGGTTACTCCATCAACAATGGTTACTACTGGGGCTGGCTCCGGCAGCCCCCAGGAAAGGGGCTG  90
V  89.3% (218/244)  IGHV4-38-2*01  49   ...................C...C................G..G...................A................G.........  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  V  Y  H  R  G  D  A  Y  Y  N  P  S  L  K  S  R  V  T  V  S  M  D  T  S  S 
                    Query_11792    91   GAGTGGATTGGGAGTGTCTATCATCGCGGGGACGCGTACTACAATCCGTCCCTCAAGAGTCGAGTCACCGTCTCAATGGACACGTCCAGT  180
V  89.3% (218/244)  IGHV4-38-2*01  139  ...............A........A.T...AG.A.C........C........................A.A...G.A..........AG  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                         N  Q  V  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  T  D  T  D  W  G  G  H 
                    Query_11792    181  AATCAGGTCTCCCTGAGCCTGAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAAGACCGATACTGACTGGGGTGGTCAC  270
V  89.3% (218/244)  IGHV4-38-2*01  229  ..C...T.........AG.....C...............................A........--------------------------  292
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-9*01     15   --------------------------------------------------------------------------.......---------  21

                                        MGT----------------------->                                  
                                         T  G  L  F  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11792    271  ACGGGGCTCTTCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  331
J  100.0% (50/50)   IGHJ2*01       4    -----------..................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_90179

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	289	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	292	276	16	0	94.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  
                    Query_11793  2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCA  91
V  94.5% (276/292)  IGHV5-51*01  2    ..G..............................................................A...G............C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  H  W  I  G  W  V  R  Q  R  P  G  K  G  L  G  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  
                    Query_11793  92   CCCACTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGGGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACA  181
V  94.5% (276/292)  IGHV5-51*01  92   G.T......................G.T.................A........G..............G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  
                    Query_11793  182  GCCCGTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACA  271
V  94.5% (276/292)  IGHV5-51*01  182  ...................G.........................T.........................A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------CDR3-IMGT--------->                                 
                                      T  A  I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11793  272  CCGCCATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  351
V  94.5% (276/292)  IGHV5-51*01  272  .......G..T...........----------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ----------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_90178

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           350     8e-99
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	C	GGGACTTATGC	CAACTCGCCA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGACTTATGCCAACTCGCCATACTGGTACTTCGATCTC	ASGTYANSPYWYFDL	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_11794  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCGGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.2% (236/248)  IGHV4-39*02  49   ...................C...........G.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  T  G  S  A  Y  H  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_11794  91   CTGGAGTGGATTGCGAGTATCTATTATACTGGGAGCGCCTACCACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  95.2% (236/248)  IGHV4-39*02  139  .............G..............G.......A.....T...............................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       N  N  H  F  S  L  Q  L  S  S  V  T  D  A  D  T  A  V  Y  Y  C  A  S  G  T  Y  A  N  S  P 
                    Query_11794  181  AACAACCACTTCTCCCTGCAGCTGAGCTCTGTGACCGACGCAGACACGGCTGTCTATTACTGTGCGAGCGGGACTTATGCCAACTCGCCA  270
V  95.2% (236/248)  IGHV4-39*02  229  ..G...............A..................C...............G..............----------------------  296
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.9% (10/11)    IGHD3-16*01  20   ---------------------------------------------------------------------....G......----------  30

                                      ----------------->                                  
                                       Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11794  271  TACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  322
J  100.0% (52/52)   IGHJ2*01     2    ....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_324040

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            297     7e-83
IGHD3-9*01                                                                                            19.9    0.16 
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-9*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTTTCGCACCCCAG	ATTACGGTATTTT	CATTTGGAGTC	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCGTTTCGCACCCCAGATTACGGTATTTTCATTTGGAGTCGATGGTTTTGATATC	VRDRFAPQITVFSFGVDGFDI	237	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	20	4	0	83.3
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	21	3	0	87.5
FR3-IMGT	123	236	114	103	11	0	90.4
CDR3-IMGT (germline)	237	244	8	7	1	0	87.5
Total	N/A	N/A	232	211	21	0	90.9


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  V  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  
                    Query_11795  13   GTGCAGCCTCTGGATTCGTCTTTAGTACCTACTGGATGTCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAA  102
V  90.9% (211/232)  IGHV3-7*03   65   .................AC........G...T......AG..................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  Q  H  G  N  E  K  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  S  V  
                    Query_11795  103  ATCAACATGGAAATGAGAAACATTACGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCATTGTCTGTAC  192
V  90.9% (211/232)  IGHV3-7*03   155  .G...G......G.......T.C..T......................................................C...A.C.G.  244
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><--------------------------CDR3-IMGT----------
                                      Q  M  N  N  L  R  V  E  D  T  A  V  Y  Y  C  V  R  D  R  F  A  P  Q  I  T  V  F  S  F  G  
                    Query_11795  193  AAATGAACAACCTGAGAGTCGAGGACACGGCCGTGTACTATTGTGTGAGAGATCGTTTCGCACCCCAGATTACGGTATTTTCATTTGGAG  282
V  90.9% (211/232)  IGHV3-7*03   245  .........G........C..................T..C....C......--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  92.3% (12/13)    IGHD3-9*01   3    --------------------------------------------------------------------......A......---------  15

                                      ---------------->                                  
                                      V  D  G  F  D  I  W  G  Q  G  T  V  V  I  V  S  S  
                    Query_11795  283  TCGATGGTTTTGATATCTGGGGCCAAGGGACAGTGGTCATCGTCTCCTCAG  333
J  91.8% (45/49)    IGHJ3*02     2    --....C.........................A......C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_90176

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           406     1e-115
IGHD3-10*01                                                                                           12.2    37    
IGHJ2*01                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGCCGCAGAGATGGCAAAA	TTCGGG	TG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCCGCAGAGATGGCAAAATTCGGGTGTACTGGTACTTCGGTCTC	ARGGRRDGKIRVYWYFGL	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_11796  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCAGGAGGCACCTTCAGCAGCTA  90
V  94.8% (275/290)  IGHV1-69*06  6    ..................G..................................................T....................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  G  I  V  P  V  L  R  T  A  N  Y  A  Q
                    Query_11796  91   TGTTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGGGGGATCGTCCCTGTCCTTCGTACAGCGAACTACGCACA  180
V  94.8% (275/290)  IGHV1-69*06  96   ..C.....G.....................................A....A......A.....A..T..G.......A...........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  T  A  D  K  S  R  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_11796  181  GAAGTTCCAGGACAGAGTCACGATTACCGCGGACAAATCCAGGAGTACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  94.8% (275/290)  IGHV1-69*06  186  ...........G.............................C...C....C.......................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  G  G  R  R  D  G  K  I  R  V  Y  W  Y  F  G  L  W  G  R  G  P  L  V  T
                    Query_11796  271  CGTGTATTACTGTGCGAGAGGAGGCCGCAGAGATGGCAAAATTCGGGTGTACTGGTACTTCGGTCTCTGGGGCCGTGGCCCCCTGGTCAC  360
V  94.8% (275/290)  IGHV1-69*06  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-10*01  13   -----------------------------------------......-------------------------------------------  18
J  94.2% (49/52)    IGHJ2*01     2    -------------------------------------------------.............A................A..........  42

                                                 
                                        V  S  S  
                    Query_11796  361  CGTCTCCTCAG  371
J  94.2% (49/52)    IGHJ2*01     43   T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_90175

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           396     2e-112
IGHD1-26*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAG	TGACCTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTGACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSDLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  F  S  L  T  N  Y
                    Query_11797  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATTCAGCCTTACCAACTA  90
V  93.5% (272/291)  IGHV5-51*01  6    .............................A...................................G........A....T......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  M  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_11797  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTATGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  93.5% (272/291)  IGHV5-51*01  96   ........G...........................CC...................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  A  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  R  A  T  D  T  A
                    Query_11797  181  GTCCTTCGAAGCCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAGGGCCACGGACACCGC  270
V  93.5% (272/291)  IGHV5-51*01  186  .......C...G.................................C...........G......A.........A....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  F  C  A  R  H  G  D  D  S  G  S  D  L  Y  Y  F  Y  G  M  D  V  G  G  Q  G  T  T  V
                    Query_11797  271  CATATATTTCTGTGCGAGACATGGGGATGATAGTGGGAGTGACCTTTACTACTTCTACGGTATGGACGTCGGGGGCCAAGGGACCACGGT  360
V  93.5% (272/291)  IGHV5-51*01  276  ...G....A............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD1-26*01  4    -----------------------------..........---------------------------------------------------  13
J  96.5% (55/57)    IGHJ6*02     6    ----------------------------------------------.......A................T...................  49

                                                   
                                        T  V  S  S 
                    Query_11797  361  CACCGTCTCCTCA  373
J  96.5% (55/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_263089

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           364     5e-103
IGHD3-3*01                                                                                            39.1    2e-07 
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	T	TTACGATTTTTTGAGTGGTTATT	N/A	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATTTACGATTTTTTGAGTGGTTATTACTTC	AIYDFLSGYYF	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	237	4	0	98.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  S  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11798  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTCCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.3% (237/241)  IGHV4-34*01  49   .....................................T....................................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11798  91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTGAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.3% (237/241)  IGHV4-34*01  139  ..................................................C.......................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  I  Y  D  F  L  S  G  Y  Y  F 
                    Query_11798  181  CAGTTCTCCCTGAAACTGAGCTCTCTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGATTTACGATTTTTTGAGTGGTTATTACTTC  270
V  98.3% (237/241)  IGHV4-34*01  229  ..............G.........G....................................-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.7% (22/23)    IGHD3-3*01   4    --------------------------------------------------------------...........G...........-----  26
J  94.9% (37/39)    IGHJ4*02     10   -------------------------------------------------------------------------------------...A.  14

                                                                        
                                       W  G  Q  G  T  L  V  P  V  S  S  
                    Query_11798  271  TGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  304
J  94.9% (37/39)    IGHJ4*02     15   .....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_90173

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     8e-121
IGHD6-13*01                                                                                           14.1    9.7   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	ARHRYLGPRQQATENDY	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	111	3	0	97.4
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	283	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  Q  G  S  G  Y  T  F  T  
                    Query_11799  2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTACCA  91
V  95.9% (283/295)  IGHV5-51*01  2    ..............................................G..................A...............G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  T  Y  P  G  D  S  D  P  R  Y  
                    Query_11799  92   CCTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAGTCACCTATCCTGGTGACTCTGATCCCAGATACA  181
V  95.9% (283/295)  IGHV5-51*01  92   G...........G..........................................GA...T...................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_11799  182  GCCCGTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTTGCAGTGGAGTAGCCTGAAGGCCTCGGACA  271
V  95.9% (283/295)  IGHV5-51*01  182  ..........................A................................C..........C...................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  M  Y  Y  C  A  R  H  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  Y  W  G  Q  G  T  L  V  
                    Query_11799  272  CCGCCATGTATTACTGTGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCA  361
V  95.9% (283/295)  IGHV5-51*01  272  .........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD6-13*01  8    -------------------------------------------.......----------------------------------------  14
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------.............................  36

                                                  
                                      T  V  S  S  
                    Query_11799  362  CCGTCTCCTCAG  373
J  100.0% (41/41)   IGHJ4*02     37   ............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_324045

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGATGGA	ATTACTAT	CAAACGAAGCA	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCGATGGAATTACTATCAAACGAAGCAATGGTTTTGATATA	TRGDGITIKRSNGFDI	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_11800  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGGCTTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  94.7% (233/246)  IGHV3-53*01  47   ................................................A.......AGC......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_11800  91   AGTGGGTCTCAGTTATTTACAGCGGTGGTACCACATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.7% (233/246)  IGHV3-53*01  137  ...................T..........G........A..................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  L  Y  Y  C  T  R  G  D  G  I  T  I  K  R  
                    Query_11800  181  ACACGCTGTATCTTCAAATGCACAGCCTGAGAGCCGACGACACGGCCCTGTACTACTGTACGAGAGGCGATGGAATTACTATCAAACGAA  270
V  94.7% (233/246)  IGHV3-53*01  227  ....................A................G.........G....T......G......------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  3    --------------------------------------------------------------------------........--------  10

                                      ---------------->                                  
                                      S  N  G  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11800  271  GCAATGGTTTTGATATATGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  321
J  93.8% (45/48)    IGHJ3*02     3    ---...C.........C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_324047

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*04                                                                                         411     5e-117
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*04	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAGCGGGTCG	ATGATCGTAGTGGTTATT	CACTTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGCGGGTCGATGATCGTAGTGGTTATTCACTTGACTACTTTGACTCC	ARQRVDDRSGYSLDYFDS	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	276	13	0	95.5


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_11801    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTA  90
V  95.5% (276/289)  IGHV5-10-1*04  6    ......................................................................................G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  K  I  D  P  V  D  P  Y  I  S  N  S  P
                    Query_11801    91   CTGGATCTCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAAGATTGATCCTGTTGACCCTTATATCAGCAACAGCCC  180
V  95.5% (276/289)  IGHV5-10-1*04  96   .......AG............................................G..........AG....T......C..A.T.......  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  S  A
                    Query_11801    181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTTGACAAGTCCATCAGCACTGCCTATCTGCAGTGGAGCAGCCTGAAGGCCTCGGACTCCGC  270
V  95.5% (276/289)  IGHV5-10-1*04  186  .............................C........................C..............................A....  275
                                          S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------------CDR3-IMGT--------------------->                       
                                          M  Y  Y  C  A  R  Q  R  V  D  D  R  S  G  Y  S  L  D  Y  F  D  S  W  G  Q  G  T  L  V  T
                    Query_11801    271  CATGTATTACTGTGCGAGACAGCGGGTCGATGATCGTAGTGGTTATTCACTTGACTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCAC  360
V  95.5% (276/289)  IGHV5-10-1*04  276  ...................-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  94.4% (17/18)    IGHD3-22*01    9    -----------------------------.....A............-------------------------------------------  26
J  97.9% (47/48)    IGHJ4*02       1    -----------------------------------------------------............A........................  37

                                                   
                                          V  S  S  
                    Query_11801    361  CGTCTCCTCAG  371
J  97.9% (47/48)    IGHJ4*02       38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_152388

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCGG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGGAACTGGTTCGACCCC	ARGGWRRQRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	219	26	0	89.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  F  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_11802  1    ACCCTGTCCCTCACCTGCGCTGTGTTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  89.4% (219/245)  IGHV4-34*01  49   .......................C.A..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  T  R  Y  N  P  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_11802  91   TGGATTGGGGAAATCAGTCATAGTGGAAGTACGAGGTACAACCCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAG  180
V  89.4% (219/245)  IGHV4-34*01  139  ................A............C..C.AC.........T......A...............A....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  I  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W 
                    Query_11802  181  CAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTATATATTACTGTGCGCGAGGGGGCTGGCGAAGACAGCGGAACTGG  270
V  89.4% (219/245)  IGHV4-34*01  229  ..GT...........C..A......T...................G.G............A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11802  271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (48/49)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_252104

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           406     1e-115
IGHD2-15*01                                                                                           10.3    137   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCG	GCTGC	AACACAAATAGCGTATTT	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGGCTGCAACACAAATAGCGTATTTCGGTATGGACGTC	ARDPAATQIAYFGMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_11803  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAATTAT  91
V  94.8% (275/290)  IGHV1-18*01  7    .....................................................................................GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  D  T  K  Y  A  Q 
                    Query_11803  92   GGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGTGGTTACAATGGTGACACAAAGTATGCACAG  181
V  94.8% (275/290)  IGHV1-18*01  97   .......G...................................................C.C..........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  F  Q  G  R  V  T  M  T  T  D  T  S  T  T  T  A  Y  L  D  L  R  S  L  R  S  D  D  T  A 
                    Query_11803  182  AGGTTCCAGGGCAGAGTCACCATGACTACAGACACATCCACGACCACAGCCTATCTGGACCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (275/290)  IGHV1-18*01  187  .A.C......................C................G.........CA....G..............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  D  P  A  A  T  Q  I  A  Y  F  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_11803  272  GTATATTACTGTGCGAGAGATCCGGCTGCAACACAAATAGCGTATTTCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  361
V  94.8% (275/290)  IGHV1-18*01  277  ..G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (5/5)     IGHD2-15*01  21   ------------------------.....-------------------------------------------------------------  25
J  100.0% (46/46)   IGHJ6*02     17   -----------------------------------------------...........................................  59

                                         
                                       S 
                    Query_11803  362  TCA  364
J  100.0% (46/46)   IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_286998

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           223     2e-60
IGHD2-21*02                                                                                           14.1    8.5  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CACTGAGAGGGGAGGCC	GACGGCTATT	TT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACTGAGAGGGGAGGCCGACGGCTATTTTTACTACGGTATGGACGTC	ATLRGEADGYFYYGMDV	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	42	9	0	82.4
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	91	23	0	79.8
CDR3-IMGT (germline)	240	243	4	4	0	0	100
Total	N/A	N/A	240	191	49	0	79.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  Y  N  W  S  S  S  G  Y  Y  W  N  W  V  R  Q  R  P  G  Q  G  L  E  
                    Query_11804  4    CCCTGAGACTCTCCTGTACTGTCTACAATTGGTCCTCCAGTGGTTACTATTGGAACTGGGTACGGCAGCGCCCCGGTCAGGGGCTGGAGT  93
V  79.6% (191/240)  IGHV4-34*01  50   .....TCC...A....CG.......TGG.G......T............C....G....A.C..C....C...A..GA............  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  S  H  S  G  S  T  W  Y  N  P  T  L  E  G  R  A  T  I  S  V  G  R  S  N  N  
                    Query_11804  94   GGATTGGCGAAATCAGTCATAGTGGGTCCACGTGGTATAATCCGACCCTCGAGGGTCGAGCCACCATATCAGTGGGCAGGTCCAACAATG  183
V  79.6% (191/240)  IGHV4-34*01  140  .......G.......A.........AAG...CAAC..C..C...T.....A..A......T............A.A..C......G..CC  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      V  F  S  L  R  L  T  S  V  T  A  A  D  T  S  V  Y  Y  C  A  T  L  R  G  E  A  D  G  Y  F  
                    Query_11804  184  TCTTCTCCCTGAGGTTGACCTCCGTGACCGCCGCGGACACGTCTGTCTATTACTGTGCGACACTGAGAGGGGAGGCCGACGGCTATTTTT  273
V  79.6% (191/240)  IGHV4-34*01  230  AG..........A.C...G...T..................G....G.............------------------------------  289
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  90.0% (9/10)     IGHD2-21*02  17   -----------------------------------------------------------------------------...T......---  26
J  98.0% (50/51)    IGHJ6*02     12   -----------------------------------------------------------------------------------------.  12

                                      ---------------->                                 
                                      Y  Y  G  M  D  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_11804  274  ACTACGGTATGGACGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCCTCA  323
J  98.0% (50/51)    IGHJ6*02     13   ................................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_152389

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           360     1e-101
IGHD2-8*01                                                                                            18.0    0.60  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCACAG	TGTAGTCATGGTATATGC	CCTCTCGAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCACAGTGTAGTCATGGTATATGCCCTCTCGATTACGGGATGGACGTC	ARPQCSHGICPLDYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  D  Y  D  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_11805  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTGACTACGACATGACCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (239/248)  IGHV3-11*06  47   ....................................C.............T......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  C  I  S  S  S  I  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11805  91   AGTGGGTTTCATGCATTAGTAGTAGCATTAGTTACACAAACTACGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (239/248)  IGHV3-11*06  137  ............A............T.G..................A...........................................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  Q  C  S  H  G  I  
                    Query_11805  181  AGAAGTCACTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGACCACAGTGTAGTCATGGTATAT  270
V  96.4% (239/248)  IGHV3-11*06  227  ....C...........G...................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  83.3% (15/18)    IGHD2-8*01   8    --------------------------------------------------------------------------....C.A.....G...  23

                                      IMGT--------------------->                                 
                                      C  P  L  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11805  271  GCCCTCTCGATTACGGGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  83.3% (15/18)    IGHD2-8*01   24   ..---------------------------------------------------------  25
J  97.9% (47/48)    IGHJ6*02     15   -----------.....T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_286994

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           304     9e-85
IGHD2-8*02                                                                                            16.1    2.2  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGCATCGCAGAA	GGTGGTGT	GAAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGCATCGCAGAAGGTGGTGTGAATTGGTTCGACCCC	AKDGIAEGGVNWFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  Q  F  S  F  Y  A  M  N  W  I  R  Q  A  P  G  K  G  L  
                    Query_11806  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCAGTTTAGTTTCTATGCCATGAACTGGATCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  88.8% (222/250)  IGHV3-23*01  47   ...................................ACC.....CAG...........G....G..........................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  G  I  S  G  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  N  I  T  R  D  N  S  
                    Query_11806  91   AGTGGGTCTCAGGCATTAGTGGAAGTGGTGGTACCACTTACTACGCAGACTCCGTGAAGGGCCGCTTCAACATTACCAGAGACAATTCTG  180
V  88.8% (222/250)  IGHV3-23*01  137  ............CT........T..........G...A..........................G....C...CT.............CA  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      G  N  T  V  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  D  G  I  A  E  G  G  
                    Query_11806  181  GGAACACGGTGTTTCTTCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTGTACTATTGTGCGAAAGATGGCATCGCAGAAGGTGGTG  270
V  88.8% (222/250)  IGHV3-23*01  227  A.......C...A...G...................C...............A..T..C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD2-8*02   14   -----------------------------------------------------------------------------------.......  20

                                      ---------------->                                  
                                      V  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11806  271  TGAATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  321
D  100.0% (8/8)     IGHD2-8*02   21   .--------------------------------------------------  21
J  97.8% (45/46)    IGHJ5*02     6    -----.........................................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_286997

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           300     8e-84
IGHD3-22*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	ACAAGACTCC	GGTTATTAC	AGAACGAGCTG	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTAAAGAACAAGACTCCGGTTATTACAGAACGAGCTGCTAT	VKEQDSGYYRTSCY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  C  G  M  H  W  V  R  Q  T  P  G  K  G  L  
                    Query_11807  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTCAGTAGTTGTGGCATGCACTGGGTCCGCCAAACTCCAGGGAAAGGCCTGG  90
V  88.4% (221/250)  IGHV3-30*18  47   ......................................T.......C.A.....................GG.......C..G..G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  T  Y  D  G  S  E  I  H  Y  A  D  S  V  E  C  R  F  T  I  S  R  D  T  S  
                    Query_11807  91   AGTGGGTGGCAGTAATAACATATGATGGAAGTGAGATACATTATGCAGACTCCGTGGAGTGCCGATTCACCATCTCCAGAGACACTTCCA  180
V  88.4% (221/250)  IGHV3-30*18  137  .............T...T..............A.T.A.T.C...............A..G........................A.....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      S  N  T  V  Y  L  Q  M  N  S  L  R  A  E  E  T  A  L  Y  Y  C  V  K  E  Q  D  S  G  Y  Y  
                    Query_11807  181  GCAACACCGTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGAGACGGCTCTCTACTACTGCGTTAAAGAACAAGACTCCGGTTATTACA  270
V  88.4% (221/250)  IGHV3-30*18  227  AG.....GC..................................C......G.G..T.....T.CG.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD3-22*01  20   --------------------------------------------------------------------------------.........-  28

                                      ------------->                                  
                                      R  T  S  C  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_11807  271  GAACGAGCTGCTATTGGGGCCAGGGAACACTGGTCTCCGTCTCGTCAG  318
J  89.5% (34/38)    IGHJ4*02     11   ----------...C..............C......A.......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_286996

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           346     2e-97
IGHD3-10*01                                                                                           10.3    117  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACA	GGGGA	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACAGGGGATACTACGGTATGGACGTC	ARDDRGYYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_11808  1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTATTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  94.0% (236/251)  IGHV4-31*03  49   ....................T................................C.A.....G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  H  Y  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  T  I  S  V  D  T  S 
                    Query_11808  91   CTGGAGTGGATTGGGAACATCCATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAACAGTCGAGTCACCATATCAGTAGACACGTCT  180
V  94.0% (236/251)  IGHV4-31*03  139  ...............T.....T...................C.................G........T.....................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  E  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  D  D  R  G  Y  Y  G 
                    Query_11808  181  AAGAACCAGTTCTCCCTGGAGCTGACCTCTATGACAGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGATGACAGGGGATACTACGGT  270
V  94.0% (236/251)  IGHV4-31*03  229  ..................A......G....G....T.................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------------.....---------  20
J  96.0% (48/50)    IGHJ6*02     12   ---------------------------------------------------------------------------------.........  20

                                      -------->                                
                                       M  D  V  W  G  Q  G  I  T  V  T  V  S  S
                    Query_11808  271  ATGGACGTCTGGGGCCAAGGGATTACGGTCACCGTCTCCTC  311
J  96.0% (48/50)    IGHJ6*02     21   ......................CC.................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_286990

Length=416
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           360     2e-101
IGHD2-15*01                                                                                           39.1    3e-07 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AA	ATTGTAGTGGTGGTAACTGCTAC	CAGAGTCGGCCTCAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAATTGTAGTGGTGGTAACTGCTACCAGAGTCGGCCTCATTACTACTATTACGGTTTGGACGTC	ARENCSGGNCYQSRPHYYYYGLDV	289	360	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	45	6	0	88.2
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	97	17	0	85.1
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	263	33	0	88.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  P  S  G  Y  S  F  T 
                    Query_11809  1    CAGGTCCAGCTTGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGCCTTCTGGTTACAGTTTTACC  90
V  88.9% (263/296)  IGHV1-18*04  1    .....T.....G.............C...........................................G............CC......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  S  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  L  A  W  I  S  P  Y  N  G  N  T  K  Y 
                    Query_11809  91   AGCTACTCTATCAACTGGGTGCGCCAGGCCCCTGGACAAGGCCTTGAGTGGTTGGCGTGGATCAGCCCTTACAATGGCAACACAAAGTAT  180
V  88.9% (263/296)  IGHV1-18*04  91   ......GG.....G.........A.................G.........A...GA.........G..........T........C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  W  R  L  Q  G  R  I  T  L  T  T  D  T  S  T  S  T  V  Y  M  E  L  R  N  L  R  S  D  D 
                    Query_11809  181  TCCTGGAGGCTCCAGGGCAGAATCACCCTGACCACAGACACATCTACGAGTACAGTTTACATGGAACTGAGGAACCTGAGATCTGACGAC  270
V  88.9% (263/296)  IGHV1-18*04  181  G.ACA..A.............G.....A................C.....C....CC........G.......G................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------------------CDR3-IMGT------------------------------>
                                       T  A  V  Y  F  C  A  R  E  N  C  S  G  G  N  C  Y  Q  S  R  P  H  Y  Y  Y  Y  G  L  D  V 
                    Query_11809  271  ACGGCCGTATACTTCTGTGCGAGAGAAAATTGTAGTGGTGGTAACTGCTACCAGAGTCGGCCTCATTACTACTATTACGGTTTGGACGTC  360
V  88.9% (263/296)  IGHV1-18*04  271  ........G..T.A............----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  95.7% (22/23)    IGHD2-15*01  6    ----------------------------...............G.......---------------------------------------  28
J  94.7% (54/57)    IGHJ6*02     6    ------------------------------------------------------------------........C......A........  29

                                                                       
                                       W  G  H  G  T  T  V  T  V  S  S 
                    Query_11809  361  TGGGGCCACGGGACCACGGTCACCGTCTCCTCA  393
J  94.7% (54/57)    IGHJ6*02     30   ........A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40814496


Query= Query_286993

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           424     8e-121
IGHD3-3*01                                                                                            12.2    35    
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGCC	TTTCGGAGT	AGGAG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGCCTTTCGGAGTAGGAGTGCTTTTGATATC	ARDAFRSRSAFDI	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	281	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  P  C  K  A  S  E  Y  I  F  T  S  Y
                    Query_11810  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTCCCTGCAAGGCATCTGAATACATCTTCACCAGCTA  90
V  96.6% (281/291)  IGHV1-46*01  6    ..................G....................................T...............G.....C............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  S  G  S  T  T  Y  A  Q
                    Query_11810  91   CTACATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTAGTGGTAGCACAACCTACGCACA  180
V  96.6% (281/291)  IGHV1-46*01  96   ...T...............................................................G............G.........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_11810  181  GAAGTTTCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  96.6% (281/291)  IGHV1-46*01  186  ......C...................................................................................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        L  Y  Y  C  A  R  D  A  F  R  S  R  S  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11810  271  CCTTTATTACTGTGCGAGAGACGCCTTTCGGAGTAGGAGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  356
V  96.6% (281/291)  IGHV1-46*01  276  .G.G.................-----------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                    
D  88.9% (8/9)      IGHD3-3*01   11   -------------------------...T.....----------------------------------------------------  19
J  100.0% (47/47)   IGHJ3*02     4    ---------------------------------------...............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_286992

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           322     2e-90
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_11811  1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_11811  91   CTAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-61*08  139  ..G..................T..T................C.................G.......TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N 
                    Query_11811  181  AGGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAAC  270
V  91.2% (228/250)  IGHV4-61*08  229  .A.................A.....GC..........................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G..G.....G.  22

                                      3-IMGT----------------------->                                  
                                       C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11811  271  TGCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  86.4% (19/22)    IGHD2-15*01  23   ......----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_176496

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTTTATTACCT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTATTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	73	1	0	98.6
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	280	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  
                    Query_11812  2    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTTCCA  91
V  94.9% (280/295)  IGHV5-51*01  2    ....G.............................................................................C...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  
                    Query_11812  92   CTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACA  181
V  94.9% (280/295)  IGHV5-51*01  92   GC..C.......G.................................................T.................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  
                    Query_11812  182  GTCCGTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACA  271
V  94.9% (280/295)  IGHV5-51*01  182  .C.........C.....................C...............C...........................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  
                    Query_11812  272  CCGCCATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTATTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  361
V  94.9% (280/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  85.7% (12/14)    IGHD1-26*01  4    ---------------------------------...G....A.....-------------------------------------------  17
J  98.0% (48/49)    IGHJ6*02     14   ----------------------------------------------------------................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_11812  362  CGGTCACCGTCTCGTCA  378
J  98.0% (48/49)    IGHJ6*02     46   .............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_176495

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           346     2e-97
IGHD5-18*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCGAGCGGATCGGCTAGAAC	ACACCTATGGT	GAAACGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCGAGCGGATCGGCTAGAACACACCTATGGTGAAACGTACTACTTTGACTCC	ARHRADRLEHTYGETYYFDS	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11813  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*08  49   ........................................G....T............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  S  G  S  T  T  Y  N  P  S  L  E  G  R  A  T  I  S  A  D  T  S  K  N 
                    Query_11813  91   TGGATTGGCTATCTCTATTACAGTGGGAGCACCACCTACAACCCCTCCCTCGAGGGTCGAGCCACCATATCAGCAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*08  139  ........G...A.....................A................A..A......T...........T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  R  A  D  R  L  E  H  T 
                    Query_11813  181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCAGACACGGCCGTTTATTACTGTGCGAGACATCGAGCGGATCGGCTAGAACACACC  270
V  95.1% (233/245)  IGHV4-59*08  229  .............A.....G...........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.9% (10/11)    IGHD5-18*01  7    -------------------------------------------------------------------------------------...G.  11

                                      GT------------------------>                                  
                                       Y  G  E  T  Y  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11813  271  TATGGTGAAACGTACTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  90.9% (10/11)    IGHD5-18*01  12   ......-------------------------------------------------------  17
J  97.9% (47/48)    IGHJ4*02     1    -------------............A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_232262

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            319     2e-89
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCCACCCGAAAA	TATGACAGTAGTGATTATT	CCTCCCACCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCACCCGAAAATATGACAGTAGTGATTATTCCTCCCACCTCTTTGACTAC	PPENMTVVIIPPTSLTT	242	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	26	1	0	96.3
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	18	3	0	85.7
FR3-IMGT	129	241	114	108	5	1	94.7
Total	N/A	N/A	242	225	16	1	93


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  G  S  I  S  S  T  N  W  W  N  W  V  R  Q  P  P  G  K  G  
                    Query_11814  1    GGTCCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATCAGCAGTACTAACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  93.0% (225/242)  IGHV4-4*02   47   ..A.....TCC...A....C............................G...........G.............................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  R  G  G  S  P  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  
                    Query_11814  91   TGGAGTGGATTGGGGAAATCTATCGTGGTGGGAGCCCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCACTAGACAAGTCCA  180
V  93.0% (225/242)  IGHV4-4*02   137  ........................A.A........A.....................................A...G............  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K   T  S  S  P  C  G  *  P  L  *  P  P  R  T  R  P  C  I  T  V  P  P  E  N  M  T  V  V  I 
                    Query_11814  181  A-AACCAGTTCTCCCTGCGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTTCCACCCGAAAATATGACAGTAGTGATT  269
V  93.0% (225/242)  IGHV4-4*02   227  .G...............AA.....G.....................................----------------------------  288
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                             
D  89.5% (17/19)    IGHD3-22*01  8    --------------------------------------------------------------------------.....T.......G..  23

                                      GT-------------------->                                  
                                       I  P  P  T  S  L  T  T  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_11814  270  ATTCCTCCCACCTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  326
D  89.5% (17/19)    IGHD3-22*01  24   ...------------------------------------------------------  26
J  100.0% (44/44)   IGHJ4*02     5    -------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_176493

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            276     3e-76
IGHD1-26*01                                                                                           10.3    118  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAACTTTCGCGACATAT	GAGCT	CCA	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAACTTTCGCGACATATGAGCTCCATATGGACGTC	AKTFATYELHMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	97	17	0	85.1
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	210	34	0	86.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11815  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  86.1% (210/244)  IGHV4-4*02   49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  Q  S  R  V  T  M  S  M  A  K  L  K 
                    Query_11815  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAACCCGTCCCTCCAGAGTCGGGTCACCATGTCAATGGCCAAGTTGAAG  180
V  86.1% (210/244)  IGHV4-4*02   139  ..............A...T.....A.T..GAG......................A.......A........A...G.A.A.....CC...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  F  F  L  Q  L  N  D  A  T  A  A  D  T  A  V  Y  Y  C  A  K  T  F  A  T  Y  E  L  H 
                    Query_11815  181  AATCAGTTCTTCCTGCAACTGAACGATGCGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAAAACTTTCGCGACATATGAGCTCCAT  270
V  86.1% (210/244)  IGHV4-4*02   229  ..C.......C....A.G....G.TC..T.....................G.............--------------------------  292
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (5/5)     IGHD1-26*01  11   ---------------------------------------------------------------------------------.....----  15
J  97.7% (42/43)    IGHJ6*02     20   -----------------------------------------------------------------------------------------.  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_11815  271  ATGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  312
J  97.7% (42/43)    IGHJ6*02     21   ...............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_176490

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD6-25*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAGG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTC	ARQSSAGRTRYGMDV	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	278	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  
                    Query_11816  3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATTCGACTTTACCG  92
V  94.2% (278/295)  IGHV5-51*01  2    ........................................C.............................T.......A.AG.......A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  V  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_11816  93   ACTACTGGATCGTCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGACACGAGATACA  182
V  94.2% (278/295)  IGHV5-51*01  92   G...........G..............T...................................................T..C.......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  G  L  K  A  S  D  
                    Query_11816  183  GTCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACA  272
V  94.2% (278/295)  IGHV5-51*01  182  .C...............................C.............A.......................A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  F  C  A  R  Q  S  S  A  G  R  T  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_11816  273  CCGCCATGTATTTTTGTGCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCT  362
V  94.2% (278/295)  IGHV5-51*01  272  ............AC...........-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD6-25*01  7    --------------------------.......---------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -----------------------------------------------...........................................  57

                                           
                                      S  S 
                    Query_11816  363  CGTCA  367
J  97.9% (47/48)    IGHJ6*02     58   .C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_176491

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           358     4e-101
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCACCCAA	TATGGTTCGGAGAGT	CTG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCACCCAATATGGTTCGGAGAGTCTG	ARATQYGSESL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	259	30	0	89.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_11817  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACTTCCTAT  91
V  89.6% (259/289)  IGHV1-18*01  7    .................................................A.................................CAG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  S  W  V  R  Q  A  P  G  G  G  L  E  W  M  G  W  S  G  P  N  N  D  D  A  H  Y  G  H 
                    Query_11817  92   GGTGTCAGCTGGGTGCGCCAGGCCCCTGGAGGAGGGCTTGAATGGATGGGATGGAGCGGCCCTAACAATGATGACGCACACTATGGACAT  181
V  89.6% (259/289)  IGHV1-18*01  97   ...A.............A............CA.........G.............T.A..G..T......G.A..A..A......C...G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  L  R  G  R  V  T  I  T  T  D  T  S  T  T  T  S  F  M  E  L  R  S  L  R  S  A  D  T  A 
                    Query_11817  182  AGCCTCCGGGGCAGAGTCACCATTACCACAGACACATCAACGACCACATCCTTCATGGAGTTGAGGAGCCTGAGATCTGCCGACACGGCC  271
V  89.6% (259/289)  IGHV1-18*01  187  .AG....A...............G..............C....G....G...A.......C..................A..........  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  A  T  Q  Y  G  S  E  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11817  272  GTATATTACTGTGCGAGAGCCACCCAATATGGTTCGGAGAGTCTGTGGGGCCAGGGAACCCTGGTCACAGTCTCCTCAG  350
V  89.6% (259/289)  IGHV1-18*01  277  ..G................------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                              
D  93.3% (14/15)    IGHD3-10*01  8    ---------------------------..........G....-------------------------------------  22
J  97.1% (33/34)    IGHJ4*02     15   ---------------------------------------------.......................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_141056

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*03                                                                                           343     2e-96
IGHD2-2*01                                                                                            18.0    0.62 
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTAGA	TCAGGATGTGCTAA	TACCAGCTG	GTCTCCGGATT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTAGATCAGGATGTGCTAATACCAGCTGGTCTCCGGATTTACTTCTACGGTTTGGACGTC	AVDQDVLIPAGLRIYFYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  L  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_11818  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGGTCTTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  93.6% (235/251)  IGHV4-61*03  49   .........................................C......AG...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  S  S  G  I  T  N  S  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11818  91   CTGGAGTGGATTGGGTATATCTCCAGCAGTGGGATCACCAACTCCAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  93.6% (235/251)  IGHV4-61*03  139  ......................ATTA........G........A..............................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       T  N  N  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  V  D  Q  D  V  L  I  P 
                    Query_11818  181  ACGAACAACTTCTCCCTGAAACTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGGTAGATCAGGATGTGCTAATACCA  270
V  93.6% (235/251)  IGHV4-61*03  229  .A....C.............G....G........................................AG...-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD2-2*01   16   -------------------------------------------------------------------------------------.....  20

                                      CDR3-IMGT-------------------------->                                
                                       A  G  L  R  I  Y  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_11818  271  GCTGGTCTCCGGATTTACTTCTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  338
D  100.0% (9/9)     IGHD2-2*01   21   ....----------------------------------------------------------------  24
J  96.2% (51/53)    IGHJ6*02     9    ---------------....A.......A........................................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_176498

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*02                                                                                           327     9e-92
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCATAAAGAGTGGTC	TGATAATAGTG	AAGGTCCCCCAC	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATAAAGAGTGGTCTGATAATAGTGAAGGTCCCCCACACTAT	AKDHKEWSDNSEGPPHY	235	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	18	21	4	4	0	0	100
CDR1-IMGT	22	45	24	21	3	0	87.5
FR2-IMGT	46	96	51	49	2	0	96.1
CDR2-IMGT	97	120	24	23	1	0	95.8
FR3-IMGT	121	234	114	112	2	0	98.2
CDR3-IMGT (germline)	235	242	8	8	0	0	100
Total	N/A	N/A	225	217	8	0	96.4


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  N  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  W  Y  D
                    Query_11819  18   GTCTGGATTCACCTTCAATTCCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCGCTTATATGGTATGA  107
V  96.4% (217/225)  IGHV3-30*02  72   .................G.AG......................................................AT.....C.......  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  F  I  R  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  E  N  T  L  Y  L  Q  M  N
                    Query_11819  108  TGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCGAGAACACGCTGTATCTGCAAATGAA  197
V  96.4% (217/225)  IGHV3-30*02  162  ................................................................A.........................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------------CDR3-IMGT-------------------->  
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  H  K  E  W  S  D  N  S  E  G  P  P  H  Y  W
                    Query_11819  198  CAGCCTGAGAGCTGAGGACACGGCTGTTTATTACTGTGCGAAAGATCATAAAGAGTGGTCTGATAATAGTGAAGGTCCCCCACACTATTG  287
V  96.4% (217/225)  IGHV3-30*02  252  ...........................G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                
D  90.9% (10/11)    IGHD3-22*01  10   ------------------------------------------------------------.....G.....-------------------  20
J  97.4% (38/39)    IGHJ4*02     10   -----------------------------------------------------------------------------------....C..  16

                                                                      
                                        G  Q  G  T  L  V  T  V  S  S  
                    Query_11819  288  GGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  97.4% (38/39)    IGHJ4*02     17   ................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_176499

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           357     1e-100
IGHD6-19*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAA	CCTGGACGC	AGCAGTGGCTGG	CACTGGGGTGTAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAACCTGGACGCAGCAGTGGCTGGCACTGGGGTGTAATTGACTAC	AKPGRSSGWHWGVIDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  S  G  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11820  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTAGCGGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-23*01  47   ................................T...........A............G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  F  
                    Query_11820  91   AGTGGGTCTCAGCTATCAGTGGTAGTGGTGGTAGTACATTCTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTTTA  180
V  96.0% (238/248)  IGHV3-23*01  137  ................T.................C....A...............................................CC.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  G  R  S  S  G  W  
                    Query_11820  181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCAAAACCTGGACGCAGCAGTGGCTGGC  270
V  96.0% (238/248)  IGHV3-23*01  227  .......G........................................................G...----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD6-19*01  7    -----------------------------------------------------------------------------............-  18

                                      T------------------>                                  
                                      H  W  G  V  I  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11820  271  ACTGGGGTGTAATTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  324
J  97.6% (41/42)    IGHJ4*02     7    ------------....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_189726

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           333     1e-93
IGHD3-10*01                                                                                           12.2    32   
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATTAAGACCCCGGAGGGCGCC	TGGTTC	TC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATTAAGACCCCGGAGGGCGCCTGGTTCTCCTACTACGGCATGGACGTC	ARIKTPEGAWFSYYGMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	19	5	0	79.2
FR2-IMGT	49	99	51	51	0	0	100
CDR2-IMGT	100	123	24	22	2	0	91.7
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	229	221	8	0	96.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  R  F  T  F  S  D  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  
                    Query_11821  14   GTGCAGCCTCTAGATTCACCTTCAGTGATTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTA  103
V  96.5% (221/229)  IGHV3-21*01  65   ...........G..............AGC....G........................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  S  S  Y  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_11821  104  GTAGTAGTAGTTATTACATATATTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGC  193
V  96.5% (221/229)  IGHV3-21*01  155  ...........AG.........C...................................................................  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------------CDR3-IMGT--------------
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  I  K  T  P  E  G  A  W  F  S  Y  Y  G  
                    Query_11821  194  AAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGATTAAGACCCCGGAGGGCGCCTGGTTCTCCTACTACGGCA  283
V  96.5% (221/229)  IGHV3-21*01  245  .................................................-----------------------------------------  293
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  100.0% (6/6)     IGHD3-10*01  10   -----------------------------------------------------------------------......-------------  15
J  96.2% (50/52)    IGHJ6*02     11   -------------------------------------------------------------------------------.........T.  21

                                      ------->                                 
                                      M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11821  284  TGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  324
J  96.2% (50/52)    IGHJ6*02     22   .....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_189724

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*02                                                                                            394     6e-112
IGHD5-18*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*02	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCAG	GGCCGAGGC	TGGATACAGCTTTGGT	ACTCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGCAGGGCCGAGGCTGGATACAGCTTTGGTACTCCCTTTGGCTCC	ARRAEAGYSFGTPFGS	263	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	45	1	0	97.8
CDR1-IMGT	47	76	30	30	0	0	100
FR2-IMGT	77	127	51	49	2	0	96.1
CDR2-IMGT	128	148	21	20	1	0	95.2
FR3-IMGT	149	262	114	110	4	0	96.5
CDR3-IMGT (germline)	263	270	8	7	1	0	87.5
Total	N/A	N/A	270	261	9	0	96.7


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  L  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R
                    Query_11822  1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCCTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCG  90
V  96.7% (261/270)  IGHV2-5*02   30   ........................................T.................................................  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  R  A  L  E  W  L  A  L  L  Y  W  D  D  D  K  R  Y  N  P  S  L  K  S  R  L  T
                    Query_11822  91   TCAGCCCCCCGGAAGGGCCCTGGAGTGGCTTGCACTCCTTTATTGGGATGATGATAAGCGCTACAATCCATCTCTGAAGAGCAGGCTCAC  180
V  96.7% (261/270)  IGHV2-5*02   120  .........A....A......................A...........................GC.......................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        L  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  N  P  V  D  T  A  T  Y  Y  C  A  R  R
                    Query_11822  181  CCTCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGAACCCTGTGGACACAGCCACATATTACTGTGCACGCAG  270
V  96.7% (261/270)  IGHV2-5*02   210  .A..................................................G.................................A...  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                      ------------CDR3-IMGT------------------>                                 
                                        A  E  A  G  Y  S  F  G  T  P  F  G  S  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_11822  271  GGCCGAGGCTGGATACAGCTTTGGTACTCCCTTTGGCTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  343
D  93.8% (15/16)    IGHD5-18*01  2    ---------...........A....------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     5    ------------------------------.....A..A..................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_189725

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           371     6e-105
IGHD3-3*01                                                                                            44.9    5e-09 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCCCG	ACGATTTTTGGAGTGGTTATTAT	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCCCGACGATTTTTGGAGTGGTTATTATCTTGACTAC	ARGPDDFWSGYYLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	242	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  E  F  T  F  S  L  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11823  1    GGTCCCTGAGACTCTCCTGTGCAGCTTCTGAATTCACCTTCAGTCTCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.0% (242/247)  IGHV3-33*01  47   .........................G....G.............AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11823  91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  98.0% (242/247)  IGHV3-33*01  137  ..........................................................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  P  D  D  F  W  S  
                    Query_11823  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGGGGCCCCGACGATTTTTGGAGTG  270
V  98.0% (242/247)  IGHV3-33*01  227  ....................................C..............................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (23/23)   IGHD3-3*01   6    ---------------------------------------------------------------------------...............  20

                                      ---------------->                                  
                                      G  Y  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11823  271  GTTATTATCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (23/23)   IGHD3-3*01   21   ........-------------------------------------------  28
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_189722

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD1-1*01                                                                                            12.2    32   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AA	TGGAAC	CTCACCCCGGATTA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAAATGGAACCTCACCCCGGATTATACGGTATGGACGTC	AKEMEPHPGLYGMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11824  1    GGTCCCTGAGACTCTCCTGTGCTGCCTCTGGATTTTCCTTCAGTAGTTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-23*01  47   ......................A...........CA....T..C..C...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  L  S  G  S  R  T  Y  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  T  D  N  S  
                    Query_11824  91   AGTGGGTCGCAAGTTTGAGTGGCAGCCGTACTTATACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCACAGACAATTCCA  180
V  90.4% (226/250)  IGHV3-23*01  137  ........T..GC.A.T.....T..TG..GG.AGC...........................................G...........  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  K  E  M  E  P  H  P  G  
                    Query_11824  181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCCTATATTACTGTGCGAAAGAAATGGAACCTCACCCCGGAT  270
V  90.4% (226/250)  IGHV3-23*01  227  .......G............................C.............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   9    ------------------------------------------------------------------------......------------  14

                                      ---------------->                                 
                                      L  Y  G  M  D  V  W  G  H  G  T  T  V  T  V  S  S 
                    Query_11824  271  TATACGGTATGGACGTCTGGGGCCACGGGACCACGGTCACCGTCTCCTCA  320
J  97.9% (47/48)    IGHJ6*02     15   --.......................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_189723

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            378     3e-107
IGHD3-22*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACAG	ATGATAGT	GGACCTAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACAGATGATAGTGGACCTAGTGACTCC	ARTDDSGPSDS	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	113	1	0	99.1
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	244	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11825  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  99.2% (244/246)  IGHV4-4*02   49   ..........................................................................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_11825  91   GAATGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  99.2% (244/246)  IGHV4-4*02   139  ..G.......................................................................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  D  D  S  G  P  S  D 
                    Query_11825  181  AACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAACAGATGATAGTGGACCTAGTGAC  270
V  99.2% (244/246)  IGHV4-4*02   229  ......................G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD3-22*01  9    ----------------------------------------------------------------------........------------  16
J  95.1% (39/41)    IGHJ4*02     8    --------------------------------------------------------------------------------------....  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11825  271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCATCAG  307
J  95.1% (39/41)    IGHJ4*02     12   .A..............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_189720

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     9e-100
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATCGTGGTG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATCGTGGTGACTACTTTGACCAC	ARGLHYYDRGDYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  R  V  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11826  1    ACCCTGTCCCTCACCTGCACTGTCTCTCGTGTCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.2% (238/250)  IGHV4-31*03  49   ...........................G...G...................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_11826  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAATAAGTCCCTCAAGAGTCGAATTACCATATCGGTAGACACGTCT  180
V  95.2% (238/250)  IGHV4-31*03  139  ..................................G............CCC................G..........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R 
                    Query_11826  181  AAGAACCAGTTCTCCCTGACGCTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCCATTACTATGATCGT  270
V  95.2% (238/250)  IGHV4-31*03  229  ...................A.....G...........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (16/18)    IGHD3-22*01  3    ----------------------------------------------------------------------------...........A..  16

                                      ----------------->                                  
                                       G  D  Y  F  D  H  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_11826  271  GGTGACTACTTTGACCACTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  322
D  88.9% (16/18)    IGHD3-22*01  17   A...------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    ----...........T....................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_189729

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           297     8e-83
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGGGA	AGGCTCTTGCCGGCTC	TGGCTGGTAC	AAGGAGGGCAT	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAGGCTCTTGCCGGCTCTGGCTGGTACAAGGAGGGCATTTACTACTCCTACTACGGTATCGACGTC	GKALAGSGWYKEGIYYSYYGIDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	218	28	0	88.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11827  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCACCTATGCCCTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  88.6% (218/246)  IGHV3-30*04  47   ...........................................T.G......TA....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  V  S  F  N  G  N  G  Q  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  D  S  
                    Query_11827  91   AGTGGGTGGCACTTGTTTCGTTTAATGGAAATGGTCAATACTACGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACGATTCCA  180
V  88.6% (218/246)  IGHV3-30*04  137  ...........G..A.A..A.A.G......G.AA.A...................................A...........A......  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  T  T  I  Y  L  E  M  N  D  L  R  D  N  D  T  A  V  Y  F  C  G  K  A  L  A  G  S  G  W  
                    Query_11827  181  AGACCACAATTTATCTGGAAATGAACGACCTGAGAGATAACGACACGGCTGTGTATTTCTGTGGGAAGGCTCTTGCCGGCTCTGGCTGGT  270
V  88.6% (218/246)  IGHV3-30*04  227  ...A...GC.G......C........AG........C.G.G................A.....C..------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD6-19*01  12   ----------------------------------------------------------------------------------........  19

                                      --CDR3-IMGT----------------------------->                                 
                                      Y  K  E  G  I  Y  Y  S  Y  Y  G  I  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11827  271  ACAAGGAGGGCATTTACTACTCCTACTACGGTATCGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
D  100.0% (10/10)   IGHD6-19*01  20   ..------------------------------------------------------------------------  21
J  96.7% (59/61)    IGHJ6*02     2    -------------........A............G.......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_188457

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           240     2e-65
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	220	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	116	21	8	0	13	38.1
FR3-IMGT	117	219	114	97	6	11	85.1
CDR3-IMGT (germline)	220	227	8	8	0	0	100
Total	N/A	N/A	251	206	15	30	82.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_11828  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  82.1% (206/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  N  Q                          S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_11828  91   CTGGAATGGATTGGGGAAATCAATCA------------------------GTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  156
V  82.1% (206/251)  IGHV4-34*01  133  .....G....................TAGTGGAAGCACCAACTACAACCC.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_11828  157  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  246
V  82.1% (206/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_11828  247  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  312
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_188456

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           375     2e-106
IGHD3-9*01                                                                                            14.1    8.2   
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTTTGAC	CACGGCTTAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTGACCACGGCTTATACTACTTTGACTAC	ARDFDHGLYYFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  N  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11829  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCAATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.0% (245/250)  IGHV3-33*01  47   ...............................................T..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  D  K  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_11829  91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTGATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCA  180
V  98.0% (245/250)  IGHV3-33*01  137  ................................A......................................A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  D  H  G  L  Y  
                    Query_11829  181  AGAACACGCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGATTTTGACCACGGCTTATACT  270
V  98.0% (245/250)  IGHV3-33*01  227  ............A.......................................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-9*01   12   ----------------------------------------------------------------------.......-------------  18
J  100.0% (48/48)   IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11829  271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_188454

Length=411
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           430     1e-122
IGHD2-15*01                                                                                           41.1    8e-08 
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACAACCCAGCCCCG	ATTGTAGTGGTGGTAGCTGCT	CCGTCGTTT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACAACCCAGCCCCGATTGTAGTGGTGGTAGCTGCTCCGTCGTTTACAACTGGTTCGACCCC	ARTQPSPDCSGGSCSVVYNWFDP	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  S  F  S  N  Y
                    Query_11830  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCAGCTTCAGCAACTA  90
V  97.6% (282/289)  IGHV1-69*06  6    ..................G..........................................................C........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  L  F  G  T  P  N  Y  A  Q
                    Query_11830  91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTCTCTTTGGTACACCAAACTACGCACA  180
V  97.6% (282/289)  IGHV1-69*06  96   ................................................................A...........G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_11830  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGCCTACATGGAGTTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  97.6% (282/289)  IGHV1-69*06  186  .............................................................C............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  Y  C  A  R  T  Q  P  S  P  D  C  S  G  G  S  C  S  V  V  Y  N  W  F  D  P  W  G  Q
                    Query_11830  271  CGTCTATTACTGTGCGAGAACACAACCCAGCCCCGATTGTAGTGGTGGTAGCTGCTCCGTCGTTTACAACTGGTTCGACCCCTGGGGCCA  360
V  97.6% (282/289)  IGHV1-69*06  276  ...G...............-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (21/21)   IGHD2-15*01  6    -----------------------------------.....................----------------------------------  26
J  100.0% (51/51)   IGHJ5*02     1    -----------------------------------------------------------------.........................  25

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_11830  361  GGGAACCCTGGTCACCGTCTCCTCAG  386
J  100.0% (51/51)   IGHJ5*02     26   ..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40288536


Query= Query_188453

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         399     3e-113
IGHD2-21*02                                                                                           19.9    0.17  
IGHJ4*02                                                                                              56.4    4e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ATCGAGTCGAC	TGTGGCGGTGACT	ACTCTCCCCGACGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAATCGAGTCGACTGTGGCGGTGACTACTCTCCCCGACGGC	ARIESTVAVTTLPDG	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  L  G  S  G  Y  N  F  T  N  Y
                    Query_11831    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTTTGGGTTCTGGATACAACTTTACCAACTA  90
V  94.1% (272/289)  IGHV5-10-1*01  6    .............................................................AA..............G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  N  W  V  R  Q  I  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  F  Y  T  N  Y  S  P
                    Query_11831    91   CTGGATCAATTGGGTGCGCCAGATTCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTTTTACACCAACTACAGTCC  180
V  94.1% (272/289)  IGHV5-10-1*01  96   ........GC..............G..............................................C...T...........C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  S  S  L  G  A  S  D  T  A
                    Query_11831    181  GTCCTTCCAAGGCCACGTCACCATTTCAGCTGACACGTCCATCAGCACTGCCTACCTCCAGTGGAGCAGCCTGGGGGCCTCGGACACCGC  270
V  94.1% (272/289)  IGHV5-10-1*01  186  ........................C..........A.....................G...............AA...............  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          I  Y  Y  C  A  R  I  E  S  T  V  A  V  T  T  L  P  D  G  W  G  Q  G  T  M  V  I  V  S  S
                    Query_11831    271  CATATATTACTGTGCGCGAATCGAGTCGACTGTGGCGGTGACTACTCTCCCCGACGGCTGGGGCCAGGGAACCATGGTCATCGTCTCCTC  360
V  94.1% (272/289)  IGHV5-10-1*01  276  ...G............A..-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  92.3% (12/13)    IGHD2-21*02    8    ------------------------------.....T.......-----------------------------------------------  20
J  94.3% (33/35)    IGHJ4*02       14   ---------------------------------------------------------................C......C.........  46

                                          
                                          
                    Query_11831    361  AG  362
J  94.3% (33/35)    IGHJ4*02       47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_188452

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            315     5e-88
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCTCTCCTAGAAGTGACTGGGCGAGGG	GGGGGAGT	N/A	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCTCTCCTAGAAGTGACTGGGCGAGGGGGGGGAGTTGGTTCGACCCC	AASPRSDWARGGSWFDP	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  G  I  T  Y  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11832  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCGGCATTACTTACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.4% (222/243)  IGHV4-4*02   49   .......................................A...G..G.A.........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  A  Y  Y  S  G  S  N  N  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  K  S  K 
                    Query_11832  91   GAGTGGATTGGGGAAGCCTATTATAGTGGGAGCAACAACTACAACCCGTCCCTCAAAAGTCGAGTCGCCATATCAGTGGACAAGTCCAAG  180
V  91.4% (222/243)  IGHV4-4*02   139  ...............AT....C............C.....................G.........A..........A............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  E  F  S  L  R  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  A  S  P  R  S  D  W  A  R 
                    Query_11832  181  AACGAGTTTTCCCTGAGGTTAACGTCTATGACCGCCGCGGACACGGCCGTATATTATTGTGCGGCCTCTCCTAGAAGTGACTGGGCGAGG  270
V  91.4% (222/243)  IGHV4-4*02   229  ...C....C.......A.C.G.GC...G......................G.....C......---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            

                                      -------------------->                                  
                                       G  G  S  W  F  D  P  W  G  Q  G  I  L  V  I  V  S  S  
                    Query_11832  271  GGGGGGAGTTGGTTCGACCCCTGGGGCCAGGGAATCCTGGTCATCGTCTCCTCAG  325
D  100.0% (8/8)     IGHD3-16*01  18   -........----------------------------------------------  25
J  95.7% (44/46)    IGHJ5*02     6    ---------.........................C........C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_188451

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           280     1e-77
IGHD2-21*02                                                                                           23.8    0.010
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGGAACTGGA	GGTGGTGACTGC	CTT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGGAACTGGAGGTGGTGACTGCCTTGACCTC	ARAGTGGGDCLDL	237	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	47	4	0	92.2
CDR2-IMGT	99	122	24	20	4	0	83.3
FR3-IMGT	123	236	114	100	14	0	87.7
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	231	205	26	0	88.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  S  F  S  G  F  G  M  H  W  V  R  Q  A  P  G  R  G  L  E  W  V  A  L  I  
                    Query_11833  13   GTACAGCGTCTGGATTCAGCTTCAGTGGCTTTGGCATGCATTGGGTCCGCCAGGCTCCAGGCAGGGGCCTGGAGTGGGTGGCACTTATAC  102
V  88.7% (205/231)  IGHV3-33*01  65   ..G...............C.......A...A.........C......................A...G...............G.....T  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      R  F  D  G  S  N  T  N  Y  A  A  F  A  K  S  R  F  I  I  S  R  D  N  S  K  N  T  M  D  L  
                    Query_11833  103  GGTTTGATGGGAGTAATACAAATTATGCAGCCTTCGCGAAGAGTCGATTCATCATCTCCAGAGACAATTCCAAGAACACGATGGATCTGC  192
V  88.7% (205/231)  IGHV3-33*01  155  ...A......A.......A.T.C.......A..C..T....G.C.......C............................C..T......  244
                                      W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------CDR3-IMGT-------------->       
                                      Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  A  G  T  G  G  G  D  C  L  D  L  W  G  
                    Query_11833  193  AGATGAACAGTCTGAGAGTCGAGGATACGGCTGTGTATTACTGTGCGAGAGCCGGAACTGGAGGTGGTGACTGCCTTGACCTCTGGGGCC  282
V  88.7% (205/231)  IGHV3-33*01  245  .A........C.......C......C.........................---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (12/12)   IGHD2-21*02  11   --------------------------------------------------------------............----------------  22
J  97.5% (39/40)    IGHJ5*02     12   -----------------------------------------------------------------------------....C........  24

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_11833  283  AGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.5% (39/40)    IGHJ5*02     25   ...........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_188450

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           262     4e-72
IGHD2-2*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GACGA	ATACTGTACTACTCCCGGCTGCT	TTAAGTACCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGACGAATACTGTACTACTCCCGGCTGCTTTAAGTACCCTTGACTCC	VKTNTVLLPAALSTLDS	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	125	24	13	8	3	54.2
FR3-IMGT	126	239	114	99	15	0	86.8
CDR3-IMGT (germline)	240	244	5	4	1	0	80
Total	N/A	N/A	247	209	35	3	84.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  V  Y  V  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_11834  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCGTCTATGTCATGGCGTGGGTCCGCCAGGCTCCAGGGAGGGGCCTGG  90
V  84.6% (209/247)  IGHV3-23*01  47   ..........................................G.AG.....C....AGC......................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  T     G  N  G  A  A  A  Y  Y  A  D  S  V  K  G  R  F  N  I  S  R  D  N  S  
                    Query_11834  91   AGTGGGTCGCAGCGACT---GGAAATGGTGCAGCCGCATACTATGCCGACTCCGTGAAGGGCCGGTTCAACATCTCCAGGGACAATTCCG  177
V  84.6% (209/247)  IGHV3-23*01  137  ........T....T.T.AGT..T.G.....GTAG.A.......C..A......................C.........A.........A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      E  N  T  L  F  L  D  M  S  G  L  R  A  D  D  T  A  V  Y  Y  R  V  K  T  N  T  V  L  L  P  
                    Query_11834  178  AGAATACCCTTTTTCTGGATATGAGCGGCCTGAGAGCCGACGACACGGCCGTATATTACCGTGTGAAGACGAATACTGTACTACTCCCGG  267
V  84.6% (209/247)  IGHV3-23*01  227  ....C..G..G.A....C.A....A.A.............G..................T...C...-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  78.3% (18/23)    IGHD2-2*01   4    ------------------------------------------------------------------------...T....G..G.A..A.  21

                                      GT-------------------->                                  
                                      A  A  L  S  T  L  D  S  W  G  Q  G  A  L  V  T  V  A  S  
                    Query_11834  268  CTGCTTTAAGTACCCTTGACTCCTGGGGCCAGGGAGCCCTGGTCACCGTCGCCTCAG  324
D  78.3% (18/23)    IGHD2-2*01   22   .....----------------------------------------------------  26
J  92.9% (39/42)    IGHJ4*02     7    ---------------......A.............A..............T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_188459

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           371     7e-105
IGHD3-10*01                                                                                           14.1    9.5   
IGHJ2*01                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGCC	ACTATGG	GGATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATC	ARSHYGDAYWYLDI	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	97	17	0	85.1
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	293	265	28	0	90.4


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T 
                    Query_11835  1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATCTTCACC  90
V  90.4% (265/293)  IGHV1-18*01  1    ...G.T.................................................................T..........C...T...  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  F  E  W  M  G  W  I  S  P  Y  N  G  N  T  A  Y 
                    Query_11835  91   AGTTATGGAATCACTTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAGCCTAC  180
V  90.4% (265/293)  IGHV1-18*01  91   ..C.....T....GC...........................C.......................G.................AA...T  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  E  K  F  Q  G  R  F  T  V  A  T  E  T  S  T  N  T  A  F  M  E  L  R  S  L  K  A  D  D 
                    Query_11835  181  GCAGAGAAGTTCCAGGGCAGATTCACCGTGGCCACAGAGACTTCCACGAACACAGCCTTCATGGAGCTGCGGAGTCTGAAAGCTGACGAC  270
V  90.4% (265/293)  IGHV1-18*01  181  ...C.....C...........G.....A..A.......C..A.......G........A..........A....C....G.T........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  S  H  Y  G  D  A  Y  W  Y  L  D  I  W  G  R  G  T  L  V  T  V  S 
                    Query_11835  271  ACGGCCGTCTATTACTGTGCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATCTGGGGCCGTGGCACCCTGGTCACTGTCTCC  360
V  90.4% (265/293)  IGHV1-18*01  271  ........G..............-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (7/7)     IGHD3-10*01  6    ----------------------------.......-------------------------------------------------------  12
J  96.2% (51/53)    IGHJ2*01     1    -----------------------------------------..........T.....C................................  49

                                          
                                       S  
                    Query_11835  361  TCAG  364
J  96.2% (51/53)    IGHJ2*01     50   ....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_188458

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           311     4e-87
IGHD3-10*01                                                                                           10.3    119  
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGG	CGGGG	GCTCGGCCGGGGCC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGCGGGGGCTCGGCCGGGGCCTTTGATATC	AREGGGSAGAFDI	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	225	26	0	89.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  G  Y  Y  F  W  S  W  V  R  Q  H  P  G  K  G 
                    Query_11836  1    ACCCTGTCCCTCACCTGCACTGTCTCAGGTGACTCCATCAGCAGTGGTTATTACTTTTGGAGTTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  89.6% (225/251)  IGHV4-31*03  49   ..........................T....G................GG.....AC.....C...A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  M  H  H  S  G  S  S  F  Y  S  A  S  L  K  S  R  I  A  M  S  V  D  T  S 
                    Query_11836  91   CTGGAGTGGATTGGGTACATGCATCACAGTGGAAGCAGCTTCTACAGCGCGTCCCTCAAGAGTCGAATTGCCATGTCAGTGGACACCTCT  180
V  89.6% (225/251)  IGHV4-31*03  139  ....................CT..T.......G....C..A.....A.C.................G..A....A.....A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  T  G  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  G  S  A  G 
                    Query_11836  181  AAGAACCAGTTCTCCCTGAAGCTGACTGGTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGAGGGCGGGGGCTCGGCCGGG  270
V  89.6% (225/251)  IGHV4-31*03  229  .........................GCTC......T...................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  15   --------------------------------------------------------------------------.....-----------  19

                                      ----------->                                  
                                       A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11836  271  GCCTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  316
J  100.0% (43/43)   IGHJ3*02     8    ---...........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_180602

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCGGCCGG	TTGTGGTAGTACCGGCTGCTATG	GAAAT	AACCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCGGCCGGTTGTGGTAGTACCGGCTGCTATGGAAATAACCGGTTCGACCCC	AREAAGCGSTGCYGNNRFDP	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_11837  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGCGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .............................................T...................................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  D  H  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11837  91   TGGATTGGGTATATCCATTACAGTGGGAGCACCGACCACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTTGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ...............T.................A..T...............................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  I  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  A  G  C  G  S  T  G 
                    Query_11837  181  CAGATCTCCCTGAAGGTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGAAGCGGCCGGTTGTGGTAGTACCGGC  270
V  95.1% (233/245)  IGHV4-59*01  229  ...T...........C...G...........................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.3% (21/23)    IGHD2-2*01   7    --------------------------------------------------------------------------....A........A..  22

                                      GT------------------------>                                  
                                       C  Y  G  N  N  R  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11837  271  TGCTATGGAAATAACCGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  91.3% (21/23)    IGHD2-2*01   23   .......------------------------------------------------------  29
J  98.0% (48/49)    IGHJ5*02     3    ------------...T.............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_197117

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           316     2e-88
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGGC	ARLMSRLNYGMAG	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_11838  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  91.4% (223/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_11838  91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  M  L  G  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_11838  181  CAGTTCTCCCTGATGTTGGGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  91.4% (223/244)  IGHV4-59*08  229  .............A.C..A............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  90.0% (45/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  G  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_11838  271  GCCGGCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  90.0% (45/50)    IGHJ6*02     24   .A..T................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_349537

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           352     3e-99
IGHD5-18*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGTCATGGTTAC	GGAGGAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGTCATGGTTACGGAGGAATTGACTAC	ARYSHGYGGIDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	234	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11839  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (234/243)  IGHV4-59*01  49   ...............................G........G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  S  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  K  N 
                    Query_11839  91   TGGATTGGTTATATCTACTACCGTGGGAGCTCCAACTCCAACCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAAGAAC  180
V  96.3% (234/243)  IGHV4-59*01  139  ........G........T...A........A......A......................G.............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  I  D 
                    Query_11839  181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGTCATGGTTACGGAGGAATTGAC  270
V  96.3% (234/243)  IGHV4-59*01  229  .............A.................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  86.7% (13/15)    IGHD5-18*01  6    ---------------------------------------------------------------.....CT........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11839  271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_197115

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACATG	ATTACCATGAT	TCCA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAACATGATTACCATGATTCCAGATGCTTTTGATATC	ARDNMITMIPDAFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  S  S  I  N  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  A 
                    Query_11840  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTAGCTCCATCAACAGTGGAGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGCC  90
V  94.4% (237/251)  IGHV4-31*03  49   ..............................G.........G......T........................................G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  D  S  G  G  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_11840  91   CTGGAGTGGATTGGATACATCTATGACAGTGGGGGCACCTCCTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCACTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ..............G.........T........A......A...........................T.........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  D  N  M  I  T  M  I 
                    Query_11840  181  AGGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACTGTCGCGGACACGGCCGTATATTACTGTGCGAGAGATAACATGATTACCATGATT  270
V  94.4% (237/251)  IGHV4-31*03  229  .A...................C...............C...............G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD3-22*01  3    ------------------------------------------------------------------------------.....T.....-  13

                                      ----------------->                                  
                                       P  D  A  F  D  I  W  G  Q  G  T  M  V  T  L  S  S  
                    Query_11840  271  CCAGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCCTCTCTTCAG  322
J  98.0% (48/49)    IGHJ3*02     2    ---.......................................G.........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_180606

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         291     5e-81
IGHD2-8*01                                                                                            21.8    0.041
IGHJ5*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-8*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCC	TCTCGTCGGG	GGATATTGTAC	CCAAGTGAATGGCAGCCGCC	CGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCTCTCGTCGGGGGATATTGTACCCAAGTGAATGGCAGCCGCCCGACTCC	ASRRGILYPSEWQPPDS	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	30	25	2	3	83.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	97	17	0	85.1
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	246	218	25	3	88.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G     S  S  W  S  W  T  R  Q  P  P  G  K  G 
                    Query_11841    1    ACCCTGTCCCTCACCTGCACTGTCTCAGGTGGCTCCATCAGCAGTGGG---TCCTCCTGGAGCTGGACCCGGCAGCCACCAGGGAAGGGC  87
V  88.6% (218/246)  IGHV4-30-2*01  49   ..................G.......T....................TGGT.A..............T......................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  D  S  G  T  T  F  Y  N  P  S  L  M  S  R  V  T  I  L  I  D  K  S 
                    Query_11841    88   CTGGAGTGGATTGGGTACATCTATGATAGTGGAACCACCTTCTACAACCCGTCCCTCATGAGTCGCGTCACCATATTAATTGACAAGTCC  177
V  88.6% (218/246)  IGHV4-30-2*01  139  ........................C.......G.G.....A.................A......A..........C.G.A....G....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         R  N  Q  F  S  L  M  L  T  S  V  T  A  A  D  T  A  F  Y  F  C  A  S  R  R  G  I  L  Y  P 
                    Query_11841    178  AGGAACCAATTCTCCCTGATGTTGACCTCTGTGACCGCCGCGGACACGGCCTTTTACTTTTGTGCCTCTCGTCGGGGGATATTGTACCCA  267
V  88.6% (218/246)  IGHV4-30-2*01  229  .A......G..........A.C...G.........................G.G..T.AC......------------------------  294
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (11/11)   IGHD2-8*01     2    ----------------------------------------------------------------------------...........---  12

                                        MGT-------------------->                                
                                         S  E  W  Q  P  P  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11841    268  AGTGAATGGCAGCCGCCCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  323
J  97.4% (38/39)    IGHJ5*01       11   -----------------...............A.......................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_197113

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_11842  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGAGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCCACTTA  90
V  95.5% (278/291)  IGHV5-51*01  6    .......................................G..........................................A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  N  P
                    Query_11842  91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAACCC  180
V  95.5% (278/291)  IGHV5-51*01  96   C.......G.................................................T.................A.........G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_11842  181  GTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  .......C.....................C...........................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_11842  271  CATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD1-26*01  4    -----------------------------...G....A.....-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------......TA....................................  49

                                                   
                                        T  V  S  S 
                    Query_11842  361  CACCGTCTCGTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_197110

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD2-2*01                                                                                            21.8    0.046 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAGTAGTGAA	TACCAGCTGCT	GTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCC	ARSSSEYQLLFWFDP	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_11843  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAGGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCAGCTA  90
V  95.8% (277/289)  IGHV5-51*03  6    ..................................................A..............G............C...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_11843  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATATATCCTGGTGACTCTGATGCCAGATATAGTCC  180
V  95.8% (277/289)  IGHV5-51*03  96   .........................................................C..................A.......C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  K  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  R  W  S  S  L  K  A  S  D  T  A
                    Query_11843  181  GTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCGGTGGAGCAGCCTCAAGGCCTCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  .......C.....................C.............................A............G.................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  S  S  E  Y  Q  L  L  F  W  F  D  P  W  G  Q  G  T  L  V  T  V  T  S
                    Query_11843  271  CATGTATTATTGTGCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCACCTC  360
V  95.8% (277/289)  IGHV5-51*03  276  .........C.........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (11/11)   IGHD2-2*01   16   -------------------------------...........------------------------------------------------  26
J  97.9% (46/47)    IGHJ5*02     5    ---------------------------------------------........................................T....  49

                                        
                                        
                    Query_11843  361  AG  362
J  97.9% (46/47)    IGHJ5*02     50   ..  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_197111

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           371     8e-105
IGHD4-17*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GGTCATC	GACTACGGTGACTAC	GTCG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGAGGTCATCGACTACGGTGACTACGTCGACTTCTACTATTACGGAATGGACGTC	ATEVIDYGDYVDFYYYGMDV	290	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	63	7	0	90
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	175	30	25	5	0	83.3
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	297	8	7	1	0	87.5
Total	N/A	N/A	297	267	30	0	89.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  K  P  G  E  S  L  R  V  S  C  A  A  S  G  L  S  F  K  N  A
                    Query_11844  1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGGTTAAGCCTGGAGAGTCCCTCAGAGTCTCCTGTGCAGCCTCTGGACTCAGCTTCAAAAACGC  90
V  89.9% (267/297)  IGHV3-15*01  6    ..........G.......G...........A........G.G......T...C....................T...CT....GT.....  95
                                        Q  L  V  E  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A

                                      ---><--------------------FR2-IMGT---------------------><----------CDR2-IMGT---------><----
                                        W  M  T  W  V  R  Q  S  P  G  K  G  L  E  W  V  G  R  I  R  S  R  T  D  G  G  T  A  D  Y
                    Query_11844  91   CTGGATGACCTGGGTCCGCCAGTCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGCATTAGAAGCAGAACCGATGGTGGGACGGCAGACTA  180
V  89.9% (267/297)  IGHV3-15*01  96   ........G.............G...............................T....A.....A...T...........AA.......  185
                                        W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y

                                      ------------------------------------------------FR3-IMGT----------------------------------
                                        A  A  P  V  K  G  R  F  I  I  S  R  D  E  S  K  T  T  L  Y  L  Q  M  N  S  L  K  T  E  D
                    Query_11844  181  CGCTGCACCCGTGAAAGGCAGATTCATCATCTCAAGAGATGAATCGAAGACCACCCTTTATCTTCAAATGAACAGCCTGAAAACCGAGGA  270
V  89.9% (267/297)  IGHV3-15*01  186  ..........................C...............T..A..A.A...G..G.....G..........................  275
                                        A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D

                                      ------------------><-------------------------CDR3-IMGT------------------------>           
                                        T  A  V  Y  Y  C  A  T  E  V  I  D  Y  G  D  Y  V  D  F  Y  Y  Y  G  M  D  V  W  G  Q  G
                    Query_11844  271  CACAGCCGTCTATTACTGTGCCACAGAGGTCATCGACTACGGTGACTACGTCGACTTCTACTATTACGGAATGGACGTCTGGGGCCAAGG  360
V  89.9% (267/297)  IGHV3-15*01  276  .........G.........A.......---------------------------------------------------------------  302
                                        T  A  V  Y  Y  C  T  T                                                                  
D  100.0% (15/15)   IGHD4-17*01  2    ----------------------------------...............-----------------------------------------  16
J  89.8% (53/59)    IGHJ6*02     4    -----------------------------------------------------...A......C.....T....................  40

                                                            
                                        S  S  V  T  V  S  S 
                    Query_11844  361  GAGTTCGGTCACCGTCTCCTCA  382
J  89.8% (53/59)    IGHJ6*02     41   ..CCA.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_224292

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           402     3e-114
IGHD3-16*01                                                                                           12.2    36    
IGHJ6*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GG	GGGGGA	TGGCGACAATTCTGACATTTCG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGAGGGGGGGATGGCGACAATTCTGACATTTCGTACGGCATTGACGTC	SRGGDGDNSDISYGIDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  I  F
                    Query_11845  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTTAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTAGCATCTT  90
V  94.5% (273/289)  IGHV5-51*01  6    ...........................G.................................................G.....C..G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  I  K  Y  S  P
                    Query_11845  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATATCAAATACAGTCC  180
V  94.5% (273/289)  IGHV5-51*01  96   ....................................................A........................C..G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  P  D  T  A
                    Query_11845  181  GTCCTTCCAAGGCCAGGTCTCCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTTTGAAGGCCCCGGACACCGC  270
V  94.5% (273/289)  IGHV5-51*01  186  ...................A.................................................CC........T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  F  C  S  R  G  G  D  G  D  N  S  D  I  S  Y  G  I  D  V  W  G  Q  G  T  K  V  T  V
                    Query_11845  271  CATCTATTTCTGTTCGAGAGGGGGGGATGGCGACAATTCTGACATTTCGTACGGCATTGACGTCTGGGGCCAAGGGACCAAGGTCACCGT  360
V  94.5% (273/289)  IGHV5-51*01  276  ...G....A....G.....-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-16*01  18   ---------------------......---------------------------------------------------------------  23
J  93.8% (45/48)    IGHJ6*02     15   -------------------------------------------------.....T..G......................C.........  55

                                             
                                        S  S 
                    Query_11845  361  CTCCTCA  367
J  93.8% (45/48)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_180608

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-10*01                                                                                           39.1    3e-07
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ACGGAGAA	TACTATGGTTCGGGGAGTTA	GGCGTCTT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAACGGAGAATACTATGGTTCGGGGAGTTAGGCGTCTTGGTATGGACGTC	ARTENTMVRGVRRLGMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	233	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  R  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11846  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGCAGATTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (233/243)  IGHV4-59*01  49   .......................................A.T..T.A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11846  91   TGGATTGGATATATTTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  95.9% (233/243)  IGHV4-59*01  139  ........G.....C...........................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  E  N  T  M  V  R  G  V 
                    Query_11846  181  CACTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAACGGAGAATACTATGGTTCGGGGAGTT  270
V  95.9% (233/243)  IGHV4-59*01  229  ..G............C............................................A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD3-10*01  5    -----------------------------------------------------------------------...................  23

                                      -------------------->                                 
                                       R  R  L  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11846  271  AGGCGTCTTGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
D  100.0% (20/20)   IGHD3-10*01  24   .-----------------------------------------------------  24
J  100.0% (45/45)   IGHJ6*02     18   ---------.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_180609

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           325     3e-91
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGGGAA	AACGAC	TGGGATCGTAGGTGGTCCGGT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGGGAAAACGACTGGGATCGTAGGTGGTCCGGTTTTCACTTC	ASRENDWDRRWSGFHF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11847  1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.0% (225/242)  IGHV4-59*08  49   ....................T......................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       L  I  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S  R  N 
                    Query_11847  91   TTGATTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGTCGACTCACCATCTCAGTAGACACGTCGAGGAAC  180
V  93.0% (225/242)  IGHV4-59*08  139  .G......G...A........A........A.....................A.......G.......A..............C.A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  S  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  N  D  W  D  R  R  W 
                    Query_11847  181  CAGTTCTCCCTGAGCGTGAACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCGAGCCGGGAAAACGACTGGGATCGTAGGTGG  270
V  93.0% (225/242)  IGHV4-59*08  229  .............AGC...G.........C................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD1-1*01   12   ---------------------------------------------------------------------......---------------  17

                                      -------------->                                  
                                       S  G  F  H  F  W  G  P  G  T  L  V  T  V  S  S  
                    Query_11847  271  TCCGGTTTTCACTTCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  319
J  93.0% (40/43)    IGHJ4*02     6    ------...G...A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_236621

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           294     6e-82
IGHD3-9*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGACCCA	TACGGTATTTTG	GCTATTGAGAAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGTGACCCATACGGTATTTTGGCTATTGAGAAG	ATGDPYGILAIEK	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	42	9	0	82.4
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  N  Y  W  S  W  I  R  Q  S  P  A  K  G 
                    Query_11848  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGCCAACTACTGGAGTTGGATCCGCCAATCCCCTGCAAAGGGC  90
V  87.6% (219/250)  IGHV4-31*03  49   .................................................GTT..........C...........GCA...A.GG......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  T  T  E  Y  N  P  S  L  K  S  R  L  T  M  S  I  D  P  S 
                    Query_11848  91   CTCGAGTGGATTGGATACATCTATTATGGCGGGACCACCGAGTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCCATTGACCCGTCT  180
V  87.6% (219/250)  IGHV4-31*03  139  ..G...........G...........CA.T....G....T.C...........C............G.T.....A..AG.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       T  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  D  P  Y  G  I  L 
                    Query_11848  181  ACGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGTGACCCATACGGTATTTTG  270
V  87.6% (219/250)  IGHV4-31*03  229  .A...................C...G...........................G.............G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD3-9*01   5    ------------------------------------------------------------------------------....A.......  16

                                      ----------->                                
                                       A  I  E  K  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11848  271  GCTATTGAGAAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
J  100.0% (32/32)   IGHJ4*02     15   ------------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_197118

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            353     9e-100
IGHD2-8*02                                                                                            19.9    0.15  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AAAGCGGGCTC	TACTGGTGGT	A	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAAAGCGGGCTCTACTGGTGGTAACTTTGACTAC	ARKAGSTGGNFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  T  H  Y  W  M  S  W  V  R  Q  A  P  G  K  W  L  
                    Query_11849  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTTACTCACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGTGGCTGG  90
V  95.6% (237/248)  IGHV3-7*03   47   ....................................CC....G.AG.....................................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  D  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11849  91   AGTGGGTTGCCGACATAAAGCAGGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (237/248)  IGHV3-7*03   137  .......G...A..........A...................................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  K  A  G  S  T  G  G  
                    Query_11849  181  AGAACTCAGTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAAAAGCGGGCTCTACTGGTGGTA  270
V  95.6% (237/248)  IGHV3-7*03   227  ........C.G.........................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD2-8*02   10   -------------------------------------------------------------------------------..........-  19

                                      ---------->                                  
                                      N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11849  271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (45/45)   IGHJ4*02     4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_197119

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           364     5e-103
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	113	1	0	99.1
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_11850  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  96.8% (241/249)  IGHV4-31*03  50   .....TCC...A....................................G.........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  
                    Query_11850  94   TGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCTA  183
V  96.8% (241/249)  IGHV4-31*03  140  ..............T......A...........................................G........................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A  
                    Query_11850  184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCAA  273
V  96.8% (241/249)  IGHV4-31*03  230  .....................................................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD2-21*02  5    ----------------------------------------------------------------------..........G.......--  22

                                      ------------->                                  
                                      N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11850  274  ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (48/48)   IGHJ4*02     1    ................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_203343

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           358     3e-101
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	N/A	N/A	CCCCGCATCGCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCCGCATCGCGTTTTGACTAC	ARGPASRFDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  F  G  G  S  F  R  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11851  1    ACCCTGTCCCTCACCTGCGCTGTCTTTGGTGGGTCCTTCAGGGGGTCCTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  96.7% (237/245)  IGHV4-34*01  49   .........................A...............T..T.A...........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_11851  91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAATTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-34*01  139  ...................................C....................................G.................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  P  A  S  R  F  D  Y  W 
                    Query_11851  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGTCCGCCGCGGACACGGCTGTATATTACTGTGCGAGAGGCCCCGCATCGCGTTTTGACTACTGG  270
V  96.7% (237/245)  IGHV4-34*01  229  ...........................A...................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
J  100.0% (43/43)   IGHJ4*02     6    ------------------------------------------------------------------------------............  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_11851  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (43/43)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_203342

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD6-19*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TTCCTCT	TGGCTGG	GACC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATTCCTCTTGGCTGGGACCTGATGCTTTTCAAATC	ARDSSWLGPDAFQI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11852  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGAAGTTACTACTGGAATTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ...............................G.........T.............GC.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  S  G  T  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  G  D  T  S  K  N 
                    Query_11852  91   TGGATTGGGTATATGTATTACAGTGGGACTACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGGAGACACGTCTAAGAAC  180
V  93.1% (228/245)  IGHV4-59*01  139  ..............C.............GC.....................A.....................T.........C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  F  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  L  G  P  D  A 
                    Query_11852  181  CAATTTTTCCTGACGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGGGATTCCTCTTGGCTGGGACCTGATGCT  270
V  93.1% (228/245)  IGHV4-59*01  229  ..G..C.C.....A.C.....................................C........A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD6-19*01  12   ------------------------------------------------------------------------.......-----------  18
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------------------.......  7

                                      -------->                                  
                                       F  Q  I  W  G  Q  G  T  I  V  T  V  S  S  
                    Query_11852  271  TTTCAAATCTGGGGCCAGGGGACAATTGTCACCGTGTCTTCAG  313
J  90.0% (45/50)    IGHJ3*02     8    ...G.T...........A........G........C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_203341

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            355     3e-100
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	CGTTCGG	ATGGTTCGGGGAGTT	CCTA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGCGTTCGGATGGTTCGGGGAGTTCCTAGGTATGGACGTC	QKRSDGSGSS*VWTS	242	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	29	28	0	1	96.6
CDR1-IMGT	29	52	24	21	3	0	87.5
FR2-IMGT	53	103	51	51	0	0	100
CDR2-IMGT	104	127	24	23	1	0	95.8
FR3-IMGT	128	241	114	110	4	0	96.5
CDR3-IMGT (germline)	242	248	7	7	0	0	100
Total	N/A	N/A	249	240	8	1	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  S   S  P  V  Q  P  L  D  S  S  L  K  I  M  P  C  T  G  S  G  K  L  Q  G  R  A  W 
                    Query_11853  1    GGTCCCTGAG-CTCTCCTGTGCAGCCTCTGGATTCATCTTTAAAGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  89
V  96.4% (240/249)  IGHV3-9*01   47   ..........A.........................C....G.T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       S  G  S  Q  V  L  V  G  I  V  V  G  *  A  M  R  I  L  *  R  A  D  S  P  S  Q  E  T  T  P 
                    Query_11853  90   AGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGGATAGGCTATGCGGATTCTGTGAAGGGCCGATTCACCATCTCAAGAGACAACGCCA  179
V  96.4% (240/249)  IGHV3-9*01   137  ..................................C..............C..........................C.............  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                       R  T  P  C  I  C  K  *  T  V  C  E  V  R  T  R  P  C  I  T  V  Q  K  R  S  D  G  S  G  S 
                    Query_11853  180  AGAACTCCCTGTATCTGCAAATGAACAGTCTGCGAGGTGAGGACACGGCCTTGTATTACTGTGCAAAAGCGTTCGGATGGTTCGGGGAGT  269
V  96.4% (240/249)  IGHV3-9*01   227  ................................A...C................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD3-10*01  9    ----------------------------------------------------------------------------..............  22

                                      ---------------->                                 
                                       S  *  V  W  T  S  G  A  K  G  P  R  S  P  S  P   
                    Query_11853  270  TCCTAGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  319
D  100.0% (15/15)   IGHD3-10*01  23   .-------------------------------------------------  23
J  100.0% (45/45)   IGHJ6*02     18   -----.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_203340

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	CG	GTGGCTGG	GTCGGTAAGGGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGCGGTGGCTGGGTCGGTAAGGGGGACTAC	ASGGWVGKGDY	237	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	24	0	0	100
FR3-IMGT	123	236	114	112	2	0	98.2
CDR3-IMGT (germline)	237	241	5	5	0	0	100
Total	N/A	N/A	230	222	8	0	96.5


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  Y  Y  W  I  H  W  V  R  Q  A  P  G  K  G  P  M  W  V  S  R  I 
                    Query_11854  12   TGTGCAGCCTCTGGATTCACCTTCAGTTATTACTGGATACACTGGGTCCGCCAAGCTCCAGGGAAGGGGCCGATGTGGGTCTCACGTATT  101
V  96.5% (222/230)  IGHV3-74*01  64   ...........................AGC........G...............................T.G.................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  V  Y  L 
                    Query_11854  102  AATAGTGATGGGAGTAGCACAAGTTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGGTGTATCTG  191
V  96.5% (222/230)  IGHV3-74*01  154  .......................C.........................................................C........  243
                                       N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------CDR3-IMGT----------->            
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  G  G  W  V  G  K  G  D  Y  W  G  Q  G 
                    Query_11854  192  CAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGCGGTGGCTGGGTCGGTAAGGGGGACTACTGGGGCCAGGGA  281
V  96.5% (222/230)  IGHV3-74*01  244  ..................................................----------------------------------------  293
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  100.0% (8/8)     IGHD6-19*01  11   ----------------------------------------------------........------------------------------  18
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------------------------------------..................  26

                                                            
                                       T  L  V  T  V  S  S  
                    Query_11854  282  ACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (40/40)   IGHJ4*02     27   ......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_203347

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           374     8e-106
IGHD1-26*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GTTCCGTAGGG	GTGGGAGCTAC	CACACTTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGTTCCGTAGGGGTGGGAGCTACCACACTTTGGTACTTTGACTAC	AKGSVGVGATTLWYFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	244	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  M  G  L  
                    Query_11855  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGATGGGGCTGG  90
V  98.0% (244/249)  IGHV3-23*01  47   .................................................................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  R  S  T  Y  Y  A  D  S  V  K  G  R  F  T  F  S  R  D  N  S  
                    Query_11855  91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTCGCAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCTTCTCCAGAGACAATTCCA  180
V  98.0% (244/249)  IGHV3-23*01  137  .............................G.T.......................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  S  V  G  V  G  A  
                    Query_11855  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAAGGTTCCGTAGGGGTGGGAGCTA  270
V  98.0% (244/249)  IGHV3-23*01  227  ....................................................A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD1-26*01  7    --------------------------------------------------------------------------------..........  16

                                      GT-------------------->                                  
                                      T  T  L  W  Y  F  D  Y  W  G  Q  G  A  L  V  T  A  S  S  
                    Query_11855  271  CCACACTTTGGTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGCCTCCTCAG  327
D  100.0% (11/11)   IGHD1-26*01  17   .--------------------------------------------------------  17
J  95.7% (44/46)    IGHJ4*02     3    -----------........................A............T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_203346

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           343     2e-96
IGHD2-2*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTATCGACTGTACCAT	TACCACCTGC	CGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTATCGACTGTACCATTACCACCTGCCGTTTTGACTTC	ASLIDCTITTCRFDF	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  G  S  I  N  S  R  N  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_11856  4    CCCTGAGACTCTCCTGCTCTGTCTCTGGTGGCTCCATCAACAGTCGTAATTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  94.3% (233/247)  IGHV4-39*01  50   .....TCC...A.....A.....................G....A...G.........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  N  Y  S  G  T  T  Y  Y  T  A  S  L  K  S  R  V  T  M  S  V  D  T  S  
                    Query_11856  94   TGGAGTGGATTGGGAGTATCAATTATAGTGGGACCACCTACTACACCGCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCCA  183
V  94.3% (233/247)  IGHV4-39*01  140  ....................T............G...........A.C.........................A................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  I  D  C  T  I  T  
                    Query_11856  184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGCCTTATCGACTGTACCATTACCA  273
V  94.3% (233/247)  IGHV4-39*01  230  ..........................................................C........-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  90.0% (9/10)     IGHD2-2*01   16   -------------------------------------------------------------------------------------.....  20

                                      ---------------->                                  
                                      T  C  R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11856  274  CCTGCCGTTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  90.0% (9/10)     IGHD2-2*01   21   G....----------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    --------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_203345

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           305     3e-85
IGHD3-22*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TCCGTGCA	TATTACTTTGATAGGAGT	CCCCGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCCGTGCATATTACTTTGATAGGAGTCCCCGGGACTAC	VRAYYFDRSPRDY	242	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	28	25	24	1	0	96
CDR1-IMGT	29	52	24	20	4	0	83.3
FR2-IMGT	53	103	51	50	1	0	98
CDR2-IMGT	104	127	24	20	4	0	83.3
FR3-IMGT	128	241	114	102	12	0	89.5
CDR3-IMGT (germline)	242	242	1	1	0	0	100
Total	N/A	N/A	239	217	22	0	90.8


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        L  R  L  S  C  S  A  S  G  F  T  S  S  D  F  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W
                    Query_11857  4    CCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTCCAGTGACTTTAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGGAGTG  93
V  90.8% (217/239)  IGHV3-21*01  51   ................G..................T....AG..A....................................G........  140
                                        L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W

                                      ---------><-------CDR2-IMGT------><----------------------------------------------------FR3
                                        V  S  S  I  T  S  S  G  T  Y  I  Y  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  A  R  N
                    Query_11857  94   GGTCTCATCCATAACTAGTAGTGGTACTTACATATACTACGCAGACTCAGTGACGGGCCGGTTCACCATCTCCAGAGACAATGCCAGGAA  183
V  90.8% (217/239)  IGHV3-21*01  141  ............T.G.......A...G..........................A......A....................C....A...  230
                                        V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N

                                      -IMGT----------------------------------------------------><--------------CDR3-IMGT--------
                                        S  M  S  L  Q  M  N  S  L  T  V  D  D  T  A  I  Y  Y  C  V  R  A  Y  Y  F  D  R  S  P  R
                    Query_11857  184  CTCTATGTCTCTGCAAATGAACAGCCTGACAGTCGACGACACGGCTATCTATTACTGTGTCCGTGCATATTACTTTGATAGGAGTCCCCG  273
V  90.8% (217/239)  IGHV3-21*01  231  ...AC...A....................G..C...G.........G.G..........-------------------------------  289
                                        S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                                 
D  88.9% (16/18)    IGHD3-22*01  2    -------------------------------------------------------------------.......A......T...-----  19

                                      ------>                                  
                                        D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11857  274  GGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  314
J  100.0% (40/40)   IGHJ4*02     9    -........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_203344

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           302     3e-84
IGHD2-2*01                                                                                            14.1    8.8  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGCTCGTTGTGATAA	TACCATCTGC	CCGAAAAACTTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTCGTTGTGATAATACCATCTGCCCGAAAAACTTGCTGGTTCGACCCC	ARGLVVIIPSARKTCWFDP	246	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	22	8	0	73.3
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	220	27	0	89.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  D  I  S  I  N  T  G  D  Y  Y  W  S  W  F  R  Q  S  P  Q  K  G  
                    Query_11858  4    CCCTGAGACTCTCCTGCACTGTCTCTGATATCTCCATCAACACCGGTGATTACTATTGGAGCTGGTTCCGCCAGTCCCCACAGAAGGGCC  93
V  89.1% (220/247)  IGHV4-31*03  50   .....TCC...A...............G.GG........G..GT....G......C.........A........CA....GG........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  F  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S  
                    Query_11858  94   TGGAATGGATTGGGTACATCTATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAGGAGTCGAGTTAGCATTTCCATAGACACGTCTA  183
V  89.1% (220/247)  IGHV4-31*03  140  ....G..................................A.................A...........C...A..AG............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  V  V  I  I  P  
                    Query_11858  184  AGAACCAGTTCTCCCTGAAGGTGAACTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGGGGGCTCGTTGTGATAATACCAT  273
V  89.1% (220/247)  IGHV4-31*03  230  ....................C...G...........................G..............-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  90.0% (9/10)     IGHD2-2*01   16   ------------------------------------------------------------------------------------.....G  21

                                      -IMGT----------------------->                                  
                                      S  A  R  K  T  C  W  F  D  P  W  G  P  G  T  L  V  S  V  S  S  
                    Query_11858  274  CTGCCCGAAAAACTTGCTGGTTCGACCCCTGGGGCCCGGGAACCCTGGTCAGCGTCTCCTCAG  336
D  90.0% (9/10)     IGHD2-2*01   22   ....-----------------------------------------------------------  25
J  95.7% (45/47)    IGHJ5*02     5    ----------------....................A..............C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_203348

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         357     1e-100
IGHD5-18*01                                                                                           14.1    8.6   
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GAAG	ACAGATATGG	GGGACTTTGGACCTGCAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAAGACAGATATGGGGGACTTTGGACCTGCATTACTTTGACTTC	ARGRQIWGTLDLHYFDF	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  D 
                    Query_11859    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGAC  90
V  95.6% (239/250)  IGHV4-30-2*01  49   ........................................................................................G.  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  F  Y  N  T  E  T  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  D  R  S 
                    Query_11859    91   CTGGAGTGGATTGGATACTTCTATAATACTGAGACCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCACTAGACAGGTCC  180
V  95.6% (239/250)  IGHV4-30-2*01  139  ..............G...A.....C...G..G..G.......................A...................G...........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                         K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  Q  I  W  G  T 
                    Query_11859    181  AAGAACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAAGACAGATATGGGGGACT  270
V  95.6% (239/250)  IGHV4-30-2*01  229  ...................A......C...........................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD5-18*01    7    --------------------------------------------------------------------------....C.....------  16

                                        MGT-------------------->                                  
                                         L  D  L  H  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11859    271  TTGGACCTGCATTACTTTGACTTCTGGGGCCAGGGCACCCTCGTCACCGTCTCCTCAG  328
J  93.5% (43/46)    IGHJ4*02       3    ------------..........A............A.....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_104509

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     2e-90
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCTCAG	AGTAGTACCAACTGTTATG	GGCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCAGAGTAGTACCAACTGTTATGGGCTTCTACTACTACGGTATGGACGTC	ARGLRVVPTVMGFYYYGMDV	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	240	117	109	5	3	93.2
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	229	16	3	92.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  G  G  S  F  S  T  Y  Y  W  T  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_11860  1    ACCCTGTCCCTCACCTGCACTGTCTATGGTGGGTCCTTCAGCACTTACTACTGGACCTGGATCCGCCAGACCCCAGGGAAGGGGCTGGAG  90
V  92.3% (229/248)  IGHV4-34*01  49   ..................G......................TGG...........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><-----------------------------------------------------FR3
                                       W  I  G  E  I  Y  V  G  G  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_11860  91   TGGATTGGGGAAATCTATGTTGGTGGAGGCACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAG  180
V  92.3% (229/248)  IGHV4-34*01  139  ...............A..CA.A.....A.....---...................................A..................  225
                                       W  I  G  E  I  N  H  S  G  S  T     N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                      -IMGT------------------------------------------------------><-------------------------CDR3
                                       N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  G  L  R  V  V  P  T  V 
                    Query_11860  181  AACCAGTTCTCCCTGAACCTGAGCTCTGTGACCGCCGCGGACACGGCTATGTACTACTGCGCGAGAGGCCTCAGAGTAGTACCAACTGTT  270
V  92.3% (229/248)  IGHV4-34*01  226  .................G..............................G....T.....T........----------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                      
D  89.5% (17/19)    IGHD2-2*01   11   --------------------------------------------------------------------------..........G...C.  26

                                      -IMGT------------------------>                                 
                                       M  G  F  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11860  271  ATGGGCTTCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
D  89.5% (17/19)    IGHD2-2*01   27   ...------------------------------------------------------------  29
J  100.0% (55/55)   IGHJ6*02     8    --------.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_104505

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            382     3e-108
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11861  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_11861  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCCGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  98.8% (247/250)  IGHV3-7*01   137  ....................................................T.............T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_11861  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  98.8% (247/250)  IGHV3-7*01   227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11861  271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_104504

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           352     3e-99
IGHD2-15*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CTGG	TTGCAGTGGTGGTAGCTGCT	N/A	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCTGGTTGCAGTGGTGGTAGCTGCTACTATTTTGACTAC	AKAGCSGGSCYYFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11862  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-23*01  47   .........................................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  I  I  F  G  N  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11862  91   AGTGGGTCTCAATTATTTTTGGAAATGGTGGTACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCTAGAGACAATGCCA  180
V  95.2% (237/249)  IGHV3-23*01  137  ...........GC....AG...T.G........G..........................................C.........T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  T  L  D  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  G  C  S  G  G  S  
                    Query_11862  181  GGAACACGCTGGATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGCTGGTTGCAGTGGTGGTAGCT  270
V  95.2% (237/249)  IGHV3-23*01  227  A..........T.........................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.0% (19/20)    IGHD2-15*01  7    -------------------------------------------------------------------------...T.............  23

                                      ---------------->                                  
                                      C  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11862  271  GCTACTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  95.0% (19/20)    IGHD2-15*01  24   ...------------------------------------------------  26
J  97.9% (47/48)    IGHJ4*02     1    ---....C...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_104507

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGGA	N/A	N/A	TCCCC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGATCCCCCTATTACGGTATGGACGTC	AGSPYYGMDV	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11863  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTACTGGATGCACTGGGTCCGCCAAGCTCCCGGGAAGGGGCTGG  90
V  96.4% (239/248)  IGHV3-74*01  47   ..............................................C.............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  F  S  D  V  T  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11863  91   TGTGGGTCTCACGTATTTTTAGTGATGTGACTAGCACAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (239/248)  IGHV3-74*01  137  .................AA........G..G...........................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  G  S  P  Y  Y  G  M  D  
                    Query_11863  181  GGAACACCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAGGATCCCCCTATTACGGTATGGACG  270
V  96.4% (239/248)  IGHV3-74*01  227  A......G.........................................................A..----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  96.2% (50/52)    IGHJ6*02     11   -------------------------------------------------------------------------...C.............  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_11863  271  TCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  305
J  96.2% (50/52)    IGHJ6*02     28   ........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_104506

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11864  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11864  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_11864  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11864  271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_104500

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           324     7e-91
IGHD3-16*01                                                                                           14.1    8.1  
IGHJ4*01                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-16*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTA	GGGCG	GGGGGAG	GGGGCTTGGTCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGGGCGGGGGGAGGGGGCTTGGTCTTC	RAGGGGLVF	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	105	9	0	92.1
CDR3-IMGT (germline)	249	249	1	1	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11865  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTCCCGGCAAAGGGCTGG  90
V  91.6% (228/249)  IGHV3-73*01  47   .........A..................T..G..........................................T....G..........  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  D  I  R  S  I  S  N  S  Y  S  T  A  Y  A  V  S  V  K  V  R  F  T  I  S  R  D  
                    Query_11865  91   AGTGGGTTGGCGATATAAGAAGCATCTCTAACAGTTACTCGACAGCATATGCTGTGTCGGTGAAAGTCAGGTTCACCATCTCCAGAGATG  180
V  91.6% (228/249)  IGHV3-73*01  137  ...........CG...T.......AAG...........G...............C...........G.......................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  E  N  T  A  Y  L  Q  M  N  S  L  K  T  K  D  T  A  V  S  Y  C  R  A  G  G  G  G  L  
                    Query_11865  181  ATTCAGAGAACACGGCGTATCTGCAAATGAACAGCCTTAAAACCAAGGACACGGCTGTCTCTTATTGTAGGGCGGGGGGAGGGGGCTTGG  270
V  91.6% (228/249)  IGHV3-73*01  227  .....A...............................G......G..........C..G.A...C....---------------------  295
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  100.0% (7/7)     IGHD3-16*01  18   --------------------------------------------------------------------------.......---------  24

                                      ---->                                  
                                      V  F  W  G  H  A  T  L  V  S  V  S  S  
                    Query_11865  271  TCTTCTGGGGCCACGCAACCCTGGTCTCCGTCTCCTCAG  309
J  91.4% (32/35)    IGHJ4*01     14   ----.........A.G..........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_104503

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           347     7e-98
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TGGACTTCAGTC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGACTTCAGTCCTTTGACTAC	ARDGLQSFDY	246	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  G  S  I  S  S  G  G  Y  L  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_11866  4    CCCTGAGACTCTCCTGCTCTGTCTCTGGTGGCTCCATCAGTAGTGGTGGTTATCTCTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  94.4% (236/250)  IGHV4-31*03  50   .....TCC...A.....A......................C...........CTA...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  E  T  S  
                    Query_11866  94   TGGAGTGGATTGGTTACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTTACCATATCACTAGAGACGTCTA  183
V  94.4% (236/250)  IGHV4-31*03  140  .............G.......A...................................A...................G....C.......  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  L  Q  S  F  D  
                    Query_11866  184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGGACTTCAGTCCTTTGACT  273
V  94.4% (236/250)  IGHV4-31*03  230  ......................................................................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (44/44)   IGHJ4*02     5    ----------------------------------------------------------------------------------........  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11866  274  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (44/44)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_346539

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         386     1e-109
IGHD3-16*01                                                                                           12.2    34    
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	ATTATG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATGACTACTTTGACTAC	ARHYDYFDY	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  R  G  F  G  Y  S  F  T  S  F
                    Query_11867    1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGTTTTGGATACAGCTTTACCAGCTT  90
V  92.7% (268/289)  IGHV5-10-1*01  6    ....................C.........................................A.....C....................A  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  F  D  S  S  T  D  Y  T  P
                    Query_11867    91   CTGGATCACTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAGAATTGATCCTTTTGACTCTTCTACCGACTATACGCC  180
V  92.7% (268/289)  IGHV5-10-1*01  96   ........GC.........................................G..G.........AG........A....A....C.GC..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  N  S  I  S  T  A  Y  L  H  L  S  S  L  K  A  S  D  T  G
                    Query_11867    181  GTCATTCCAAGGCCACGTCACCATCTCAGCTGACAACTCCATCAGTACTGCCTACCTGCACTTGAGCAGCCTGAAGGCCTCGGACACCGG  270
V  92.7% (268/289)  IGHV5-10-1*01  186  ...C................................G........C..............G.G..........................C  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------CDR3-IMGT-------->                                  
                                          M  Y  Y  C  A  R  H  Y  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11867    271  CATGTATTACTGTGCGAGACATTATGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  344
V  92.7% (268/289)  IGHV5-10-1*01  276  ...................-------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                        
D  100.0% (6/6)     IGHD3-16*01    3    --------------------......------------------------------------------------  8
J  100.0% (48/48)   IGHJ4*02       1    --------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_346530

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD3-3*01                                                                                            18.0    0.60 
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCAATCGAGGC	TTTTGGAGGGGT	CGGGGGCCCCTTATCGC	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCAATCGAGGCTTTTGGAGGGGTCGGGGGCCCCTTATCGCTACTTCGATCTC	AREQSRLLEGSGAPYRYFDL	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_11868  1    ACCCTGTCCCTCACCTGCACTGTCTCGGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATTCGGCAGGCCCCAGGGAAGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   ..........................T...................................C......C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  Y  S  R  G  R  T  N  Y  N  P  A  L  T  T  R  V  T  I  S  A  D  S  S  K  N 
                    Query_11868  91   TGGATTGGATATTTCTATAGCAGAGGCAGGACGAACTACAACCCCGCCCTCACGACTCGAGTCACCATATCAGCAGACTCGTCCAAGAAC  180
V  92.2% (226/245)  IGHV4-59*01  139  ........G...A.....TA...T..G..C..C............T......A..G.................T....A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  Q  S  R  L  L  E  G  S 
                    Query_11868  181  CAGTTCTCCCTGAAGCTCAGCTCTGTTACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGAGCAATCGAGGCTTTTGGAGGGGTCG  270
V  92.2% (226/245)  IGHV4-59*01  229  .................G........G....................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-3*01   11   ----------------------------------------------------------------------------........T...--  22

                                      GT------------------------>                                  
                                       G  A  P  Y  R  Y  F  D  L  W  G  R  G  T  Q  V  T  V  S  S  
                    Query_11868  271  GGGGCCCCTTATCGCTACTTCGATCTCTGGGGCCGTGGCACCCAGGTCACTGTCTCCTCAG  331
J  97.8% (45/46)    IGHJ2*01     8    ---------------............................T.................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_346531

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGATGGCCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTC	VRQSSDGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  S  Y
                    Query_11869  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCAGTTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ....................................C.......................................AG.........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  T  G  L  E  R  M  G  I  I  F  P  D  D  S  D  T  R  Y  S  P
                    Query_11869  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGCGGATGGGGATCATCTTTCCGGATGACTCTGATACCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ................................A..........T...............A...T.G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11869  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  ............................................G.....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                           
                                        K  Y  Y  C  V  R  Q  S  S  D  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_11869  271  CAAGTATTATTGTGTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  355
V  95.2% (277/291)  IGHV5-51*01  276  ..T......C....C......----------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                   
J  100.0% (42/42)   IGHJ6*02     15   -------------------------------------------..........................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_346533

Length=316
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           372     2e-105
IGHD7-27*01                                                                                           12.2    29    
IGHJ1*01                                                                                              62.2    6e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD7-27*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CC	CTGGGG	N/A	GCACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCTGGGGGCAC	ARPWGH	243	260	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	243	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_11870  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (243/248)  IGHV3-11*01  47   .................................................C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  S  G  S  T  K  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11870  91   AGTGGGTTTCATACATTAGTACTAGTGGTAGTACCAAACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  98.0% (243/248)  IGHV3-11*01  137  .....................G..............T.T...................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----CDR3-IMGT--->          
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  W  G  H  W  G  Q  
                    Query_11870  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGACCCTGGGGGCACTGGGGCCAGG  270
V  98.0% (243/248)  IGHV3-11*01  227  ..........................................................C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD7-27*01  5    ----------------------------------------------------------------------......--------------  10
J  94.7% (36/38)    IGHJ1*01     15   ----------------------------------------------------------------------------..............  28

                                                              
                                      G  P  L  V  T  V  S  S  
                    Query_11870  271  GCCCCCTGGTCACTGTCTCCTCAG  294
J  94.7% (36/38)    IGHJ1*01     29   ..A..........C..........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30515799


Query= Query_346534

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           319     2e-89
IGHD2-8*02                                                                                            16.1    2.1  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD2-8*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAC	TACTGGCGGTG	AA	GATAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTACTACTGGCGGTGAAGATATC	ARSTTGGEDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	23	1	0	95.8
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	20	4	0	83.3
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	230	217	13	0	94.3


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  D  F  Y  M  T  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  F  I  
                    Query_11871  14   GTGCAGCCTCTGGATTCACCTTCAGTGACTTCTACATGACCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAATGGGTTTCATTCATTA  103
V  94.3% (217/230)  IGHV3-11*06  65   ..............................A........G.................................G..........A.....  154
                                         A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  R  S  G  H  S  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  R  N  S  L  F  L  
                    Query_11871  104  GTAGTAGAAGTGGTCACTCAAACTACGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCAGGAACTCACTGTTTTTGC  193
V  94.3% (217/230)  IGHV3-11*06  155  .......T...A..T..A...................................A..................A...........A.C...  244
                                      S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------CDR3-IMGT--------->                
                                      Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  S  T  T  G  G  E  D  I  W  G  Q  G  T  
                    Query_11871  194  AAATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAAGTACTACTGGCGGTGAAGATATCTGGGGCCAAGGGACAA  283
V  94.3% (217/230)  IGHV3-11*06  245  ................................G.................----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  90.9% (10/11)    IGHD2-8*02   10   -------------------------------------------------------......T....------------------------  20
J  100.0% (38/38)   IGHJ3*02     11   --------------------------------------------------------------------......................  32

                                                      
                                      M  V  T  V  S  S
                    Query_11871  284  TGGTCACCGTCTCTTC  299
J  100.0% (38/38)   IGHJ3*02     33   ................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_346535

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     1e-95
IGHD3-16*01                                                                                           10.3    116  
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAGGTTTCGATA	GGGGG	G	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAGGTTTCGATAGGGGGGGGTTCGACCCC	ARDRGFDRGGFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11872  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   .......................................A......A..............................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  Y  Y  S  G  S  I  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  M  P  K  N 
                    Query_11872  91   TGGATTGCGTATATCTATTACAGTGGGAGCATCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACATGCCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  .......G.......................C...C.....................................T.....C.T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  N  S  L  K  L  S  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  D  R  G  F  D  R  G  G  F 
                    Query_11872  181  CAGAACTCCCTGAAGTTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTTTTACTGTGCGAGAGATAGAGGTTTCGATAGGGGGGGGTTC  270
V  94.3% (231/245)  IGHV4-59*01  229  ...TT..........C................T................A...............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -------------------------------------------------------------------------------.....------  22
J  97.8% (44/45)    IGHJ5*02     7    -------------------------------------------------------------------------------------.....  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_11872  271  GACCCCTGGGGCCAGGGAACCCTGGCCACCGTCTCCTCAG  310
J  97.8% (44/45)    IGHJ5*02     12   .........................T..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_205969

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           297     7e-83
IGHD2-21*01                                                                                           19.9    0.16 
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-21*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTGTTCCAAT	TGGTGGTTATTGGTAT	CCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTGTTCCAATTGGTGGTTATTGGTATCCCTTCGATCCC	ARDRVPIGGYWYPFDP	255	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	123	36	16	8	12	44.4
FR3-IMGT	124	254	114	105	9	0	92.1
CDR3-IMGT (germline)	255	262	8	8	0	0	100
Total	N/A	N/A	262	228	22	12	87


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11873  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTACTTATAGTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  87.0% (228/262)  IGHV3-30*04  47   .....................................C.......GC...GC......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----CDR2-IMGT----><--------------------------------------------------------
                                      E  W  V  A  V  I  A  Y  D  G  N  T  Y  Y  A  D  S  Y  Y  A  D  S  V  K  G  R  F  T  I  S  
                    Query_11873  91   AGTGGGTGGCAGTTATTGCATATGATGGCAATACATACTACGCAGACTCCTACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCA  180
V  87.0% (228/262)  IGHV3-30*04  137  ................AT..........A.G..------------.TAAA..........................A.............  214
                                      E  W  V  A  V  I  S  Y  D  G  S              N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  

                                      ----FR3-IMGT-------------------------------------------------------------><---------------
                                      R  D  N  S  R  D  T  L  Y  L  Q  M  N  R  L  R  P  E  D  T  A  V  Y  Y  C  A  R  D  R  V  
                    Query_11873  181  GAGACAATTCCAGGGACACCCTCTATCTGCAAATGAACCGCCTGAGACCTGAGGACACCGCTGTCTATTACTGTGCGAGAGATCGTGTTC  270
V  87.0% (228/262)  IGHV3-30*04  215  ............A.A....G..G...............A........G..........G.....G.................--------  296
                                      R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R           

                                      ----CDR3-IMGT------------------>                                  
                                      P  I  G  G  Y  W  Y  P  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11873  271  CAATTGGTGGTTATTGGTATCCCTTCGATCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  87.5% (14/16)    IGHD2-21*01  10   ----.......G....C...----------------------------------------------  25
J  97.7% (42/43)    IGHJ5*02     9    -----------------------.....C.....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_279647

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         321     7e-90
IGHD3-10*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGGATCGGGGGCGGGCC	TATTATA	TA	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGATCGGGGGCGGGCCTATTATATATTGATTAT	ARGGSGAGLLYIDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  V  S  G  F  T  I  N  S  F  A  T  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11874    1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACTATCAATAGTTTTGCCACACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.2% (227/249)  IGHV3-30-3*01  47   ........................C............CT...G...C.A...T.TG..................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  D  G  S  N  E  F  Y  A  D  S  M  K  G  R  F  T  L  Y  R  D  N  S  
                    Query_11874    91   AGTGGGTGGCAGTAATTTCATATGATGGAAGCAATGAATTCTACGCAGACTCCATGAAGGGCCGATTCACCCTCTACAGAGACAATTCCC  180
V  91.2% (227/249)  IGHV3-30-3*01  137  .............T..A..................A...A.............G.................A...C.............A  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                        Q  N  T  L  D  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  G  S  G  A  G  L  
                    Query_11874    181  AGAACACTCTGGATCTACAAATGAACAGTCTGAGAGTTGAGGACACGGCTGTGTATTACTGTGCGAGAGGCGGATCGGGGGCGGGCCTAT  270
V  91.2% (227/249)  IGHV3-30-3*01  227  .......G...T....G...........C.......C................................---------------------  295
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-10*01    23   ---------------------------------------------------------------------------------------...  25

                                        ------------->                                  
                                        L  Y  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11874    271  TATATATTGATTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (7/7)     IGHD3-10*01    26   ....--------------------------------------------  29
J  95.2% (40/42)    IGHJ4*02       7    ------....C..C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_28378

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*14                                                                                           369     2e-104
IGHD7-27*01                                                                                           14.1    8.5   
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*14	IGHD7-27*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCATC	CTGGGGA	CC	TTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCATCCTGGGGACCTTACCACTATTACTACGGTTTGGACGTC	ARPSWGPYHYYYGLDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11875  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCGCCAGGCAAGGGGCTGG  90
V  97.6% (242/248)  IGHV3-30*14  47   .........................................................................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  H  D  G  G  T  K  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11875  91   AGTGGGTGGCAGTTATATCACATGATGGAGGCACTAAATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  97.6% (242/248)  IGHV3-30*14  137  ....................T........A.T.A........A...............................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  S  W  G  P  Y  H  
                    Query_11875  181  AGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGACCATCCTGGGGACCTTACCACT  270
V  97.6% (242/248)  IGHV3-30*14  227  ....................................................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD7-27*01  5    -------------------------------------------------------------------------.......----------  11
J  95.1% (58/61)    IGHJ6*02     2    ----------------------------------------------------------------------------------....T...  9

                                      T------------------>                                 
                                      Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11875  271  ATTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  95.1% (58/61)    IGHJ6*02     10   .C.........A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_28376

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           315     5e-88
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTCTGTCGG	CTAAGGTGACTAC	GGGGGT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTCTGTCGGCTAAGGTGACTACGGGGGTCTTTGACTTC	AKVLSAKVTTGVFDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	225	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  D  S  G  F  S  L  R  G  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11876  1    GGTCCCTGAGACTCTCCTGTGCAGACTCTGGATTCAGCCTCAGAGGCTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (225/249)  IGHV3-23*01  47   ........................C...........C.T.T..CA......CC....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  S  G  R  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11876  91   AGTGGGTCTCAGTTATTAGTGGGAGTGGGAGGAGTACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  90.4% (225/249)  IGHV3-23*01  137  ............C.........T.....TG.T..C.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  K  M  L  F  L  E  L  N  S  L  R  A  E  D  S  A  V  Y  F  C  A  K  V  L  S  A  K  V  T  
                    Query_11876  181  AGAAAATGCTGTTTCTGGAATTGAACAGCCTCAGAGCCGAGGACTCGGCCGTATATTTCTGTGCGAAAGTTCTGTCGGCTAAGGTGACTA  270
V  90.4% (225/249)  IGHV3-23*01  227  ....C.C.....A....C..A..........G............A............A...........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.3% (12/13)    IGHD4-17*01  4    ------------------------------------------------------------------------------...C........  15

                                      ---------------->                                  
                                      T  G  V  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11876  271  CGGGGGTCTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  92.3% (12/13)    IGHD4-17*01  16   .--------------------------------------------------  16
J  97.7% (43/44)    IGHJ4*02     5    -------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_28377

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           399     3e-113
IGHD7-27*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGTCCTTTTA	CTAACTGGGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGTCCTTTTACTAACTGGGGTTGACTTT	AVLLLTGVDF	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	270	15	0	94.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  N  Y
                    Query_11877  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACAGCTTTACCAACTA  90
V  94.7% (270/285)  IGHV5-51*03  6    .............................................................A........................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  G  W  V  R  Q  R  P  G  E  G  L  E  W  M  G  L  I  Y  P  G  D  S  D  T  R  Y  N  S
                    Query_11877  91   CTTCATCGGCTGGGTGCGCCAGAGGCCCGGGGAAGGCCTGGAGTGGATGGGGCTCATTTATCCTGGTGACTCTGATACCAGGTACAACTC  180
V  94.7% (270/285)  IGHV5-51*03  96   ..GG...................T.......A....................A....C.......................A....G.C.  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11877  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.7% (270/285)  IGHV5-51*03  186  ...............G............................G..........C..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        I  Y  Y  C  A  V  L  L  L  T  G  V  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11877  271  CATTTATTACTGTGCAGTCCTTTTACTAACTGGGGTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  347
V  94.7% (270/285)  IGHV5-51*03  276  ...G...........--------------------------------------------------------------  290
                                        M  Y  Y  C  A                                                              
D  100.0% (10/10)   IGHD7-27*01  1    -------------------------..........------------------------------------------  10
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_28374

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           366     2e-103
IGHD6-19*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAGGGTGGGGCCCA	TATAGTAGTGGCTGGT	TCCCGTG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAGGGTGGGGCCCATATAGTAGTGGCTGGTTCCCGTGTGACTAC	ARDRGWGPYSSGWFPCDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11878  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-30*03  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11878  91   AGTGGGTGGCAGTTATATCATATGATGGAAGTAAGAAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.8% (242/250)  IGHV3-30*03  137  ..................................T.....C.................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  D  T  L  F  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  G  W  G  P  Y  
                    Query_11878  181  AAGACACGCTGTTTCTGCAAATCAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGATAGAGGGTGGGGCCCATATA  270
V  96.8% (242/250)  IGHV3-30*03  227  .GA.........A.........G...............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.8% (15/16)    IGHD6-19*01  4    --------------------------------------------------------------------------------------....  7

                                      IMGT--------------------->                                  
                                      S  S  G  W  F  P  C  D  Y  W  G  Q  G  N  L  V  T  V  S  S  
                    Query_11878  271  GTAGTGGCTGGTTCCCGTGTGACTACTGGGGCCAGGGAAACTTGGTCACCGTCTCCTCAG  330
D  93.8% (15/16)    IGHD6-19*01  8    .C..........------------------------------------------------  19
J  95.1% (39/41)    IGHJ4*02     8    -------------------....................C.C..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_28375

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            296     2e-82
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCTCTCCTAGAAGTGACTGGGCGAGGG	GGGGGAGT	N/A	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCTCTCCTAGAAGTGACTGGGCGAGGGGGGGGAGTTGGTTCGACCCC	AASPRSDWARGGSWFDP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	51	0	0	100
CDR2-IMGT	108	128	21	17	4	0	81
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	217	28	0	88.6


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  G  S  I  G  I  T  Y  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_11879  1    GGTCCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATCGGCATTACTTACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  88.6% (217/245)  IGHV4-4*02   47   ..A.....TCC...A....C.....................A...G..G.A.......................................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  A  Y  Y  S  G  S  N  N  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  K  S  
                    Query_11879  91   TGGAGTGGATTGGGGAAGCCTATTATAGTGGGAGCAACAACTACAACCCGTCCCTCAAAAGTCGAGTCGCCATATCAGTGGACAAGTCCA  180
V  88.6% (217/245)  IGHV4-4*02   137  .................AT....C............C.....................G.........A..........A..........  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  D  E  F  S  L  R  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  A  S  P  R  S  D  W  A  
                    Query_11879  181  AGGACGAGTTTTCCCTGAGGTTAACGTCTATGACCGCCGCGGACACGGCCGTATATTATTGTGCGGCCTCTCCTAGAAGTGACTGGGCGA  270
V  88.6% (217/245)  IGHV4-4*02   227  ..A..C....C.......A.C.G.GC...G......................G.....C......-------------------------  291
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          

                                      GT-------------------->                                  
                                      R  G  G  S  W  F  D  P  W  G  Q  G  I  L  V  I  V  S  S  
                    Query_11879  271  GGGGGGGGAGTTGGTTCGACCCCTGGGGCCAGGGAATCCTGGTCATCGTCTCCTCAG  327
D  100.0% (8/8)     IGHD3-16*01  18   ---........----------------------------------------------  25
J  95.7% (44/46)    IGHJ5*02     6    -----------.........................C........C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_28372

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            336     1e-94
IGHD2-15*01                                                                                           14.1    8.9  
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	TTATGCCCAGAGTCATTTAC	GGTGGTGGCT	CCAGCTTGCTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATTTATGCCCAGAGTCATTTACGGTGGTGGCTCCAGCTTGCTCCTACGGTTTGGACGTC	AKDLCPESFTVVAPACSYGLDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	251	9	9	0	0	100
Total	N/A	N/A	251	233	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  A  G  F  S  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11880  1    GGTCCCTGAGACTCTCCTGTGCAGCCGCTGGATTCAGTTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  92.8% (233/251)  IGHV3-9*01   47   ..........................T.........CC....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  N  S  H  S  I  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_11880  91   AGTGGGTCTCAGGTATTAATTGGAATAGTCATAGTATCGCCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAGCGCCA  180
V  92.8% (233/251)  IGHV3-9*01   137  ..................G..........GG...C..A.G............................................A.....  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  Y  L  Y  L  Q  M  N  S  L  T  P  D  D  T  A  L  Y  F  C  A  K  D  L  C  P  E  S  F  
                    Query_11880  181  AGAACTACCTATATCTGCAAATGAACAGTCTGACACCTGACGACACAGCCTTGTATTTCTGCGCAAAAGATTTATGCCCAGAGTCATTTA  270
V  92.8% (233/251)  IGHV3-9*01   227  ......C...G......................G.G....G.....G..........A...T.........-------------------  297
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                      -CDR3-IMGT--------------------------->                              
                                      T  V  V  A  P  A  C  S  Y  G  L  D  V  W  G  Q  G  T  R  V  T  V  S 
                    Query_11880  271  CGGTGGTGGCTCCAGCTTGCTCCTACGGTTTGGACGTCTGGGGCCAAGGGACCAGGGTCACCGTCTCC  338
D  90.0% (9/10)     IGHD2-15*01  14   -......A...---------------------------------------------------------  23
J  95.7% (44/46)    IGHJ6*02     14   ----------------------.......A........................C.............  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_28373

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            385     4e-109
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAAAGCGGCCGCTT	ATAGTAGTGGTTATTACT	CCCTGACTGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAAAGCGGCCGCTTATAGTAGTGGTTATTACTCCCTGACTGTTTTTGACCAC	ARDKAAAYSSGYYSLTVFDH	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	114	0	0	100
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	247	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11881  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  99.6% (247/248)  IGHV4-4*02   49   ..........................................................................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  E  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_11881  91   GAGTGGATTGAGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  99.6% (247/248)  IGHV4-4*02   139  ..........G...............................................................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------------CDR3
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  K  A  A  A  Y  S  S 
                    Query_11881  181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGACAAAGCGGCCGCTTATAGTAGT  270
V  99.6% (247/248)  IGHV4-4*02   229  ....................................................................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (18/18)   IGHD3-22*01  12   ----------------------------------------------------------------------------------........  19

                                      -IMGT------------------------>                                  
                                       G  Y  Y  S  L  T  V  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11881  271  GGTTATTACTCCCTGACTGTTTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  100.0% (18/18)   IGHD3-22*01  20   ..........------------------------------------------------------  29
J  97.7% (42/43)    IGHJ4*02     6    ---------------------......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_28370

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           400     9e-114
IGHD3-3*01                                                                                            10.3    133   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTAGGGGCGAGGGTA	ATTTT	CTTCAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAGGGGCGAGGGTAATTTTCTTCAGTAC	ARLRGEGNFLQY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  D  F  R  R  Y
                    Query_11882  1    GCAGCTGGTGCAGTCTGGAGGAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACGACTTTAGGAGATA  90
V  94.1% (273/290)  IGHV5-51*01  6    ....................C............................................G..........AG.....CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  A  G  K  G  L  E  Y  M  G  I  I  Y  P  N  D  S  D  I  R  Y  G  P
                    Query_11882  91   CTGGATCGGCTGGGTGCGCCAGATGGCCGGGAAAGGCCTGGAGTACATGGGGATCATCTATCCTAATGACTCTGATATCAGATACGGTCC  180
V  94.1% (273/290)  IGHV5-51*01  96   .........................C..................GG..................GG...........C.......A.C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  K  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11882  181  GTCCTTCAAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.1% (273/290)  IGHV5-51*01  186  .......C................C.................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  L  R  G  E  G  N  F  L  Q  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_11882  271  CATGTATTACTGTGCGAGACTTAGGGGCGAGGGTAATTTTCTTCAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  353
V  94.1% (273/290)  IGHV5-51*01  276  ....................---------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (5/5)     IGHD3-3*01   9    -----------------------------------.....-------------------------------------------  13
J  97.3% (36/37)    IGHJ4*02     12   ----------------------------------------------.................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_28371

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD3-22*01                                                                                           37.2    9e-07
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCTT	CTATGATAGCAGTGGTTATTAC	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCTTCTATGATAGCAGTGGTTATTACCACTTTGACTAT	VVFYDSSGYYHFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	240	1	1	0	0	100
Total	N/A	N/A	237	220	17	0	92.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  A  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_11883  4    CCCTGAGACTCTCCTGCACTGTGTCTGGTGCCGCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  92.8% (220/237)  IGHV4-59*01  50   .....TCC...A..........C.......G.T.........................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_11883  94   GGATTGGTTATATCTACCACAGTGGGACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAACC  183
V  92.8% (220/237)  IGHV4-59*01  140  .......G........TT.........G...............C.............................A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  F  Y  D  S  S  G  Y  Y  H  
                    Query_11883  184  AGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGTGGTCTTCTATGATAGCAGTGGTTATTACCACT  273
V  92.8% (220/237)  IGHV4-59*01  230  ..................GC..........................G..T.......---------------------------------  286
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                                   
D  95.5% (21/22)    IGHD3-22*01  7    ----------------------------------------------------------------.........T............----  28
J  95.6% (43/45)    IGHJ4*02     4    ---------------------------------------------------------------------------------------...  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_11883  274  TTGACTATTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  315
J  95.6% (43/45)    IGHJ4*02     7    .......C.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_195669

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           385     4e-109
IGHD3-16*02                                                                                           12.2    33    
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTATCG	ACATTGGTTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTATTTGACTAT	ARHYRHWLFDY	267	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	27	3	0	90
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	152	21	18	3	0	85.7
FR3-IMGT	153	266	114	107	7	0	93.9
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	260	14	0	94.9


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  V  S  L  T  S  S  S  Y  Y  W  G  W  
                    Query_11884  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCCTCACCAGTAGTAGTTACTACTGGGGCTGGA  90
V  94.9% (260/274)  IGHV4-39*01  26   ................T.....................................G....A...G..........................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  
                    Query_11884  91   TCCGCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGAGTTTGTATTATAGTGGCAGCACCTACTACAACCCGTCCCTCAAGAGTCGAG  180
V  94.9% (260/274)  IGHV4-39*01  116  .........................................A.C...........G..................................  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  H  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  
                    Query_11884  181  TCACCATATCCGTGGACACGTCCAAGAACCACTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGA  270
V  94.9% (260/274)  IGHV4-39*01  206  .............A.................G..C........G....G...T.......................G.............  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      --------CDR3-IMGT----------->                                  
                                      R  H  Y  R  H  W  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11884  271  GACATTATCGACATTGGTTATTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
V  94.9% (260/274)  IGHV4-39*01  296  ....-----------------------------------------------------------  299
                                      R                                                              
D  100.0% (6/6)     IGHD3-16*02  25   ----......-----------------------------------------------------  30
J  97.7% (42/43)    IGHJ4*02     6    --------------------........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_244153

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           355     3e-100
IGHD3-16*02                                                                                           52.6    2e-11 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AG	ATTATGATTACGTTTGGGGGAGTTATC	TCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGATTATGATTACGTTTGGGGGAGTTATCTCCACTAC	AREDYDYVWGSYLHY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  F  D  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11885  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCGACAGTACTTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*02  49   ..................................C..T.....G...C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  E  D  T  S  K  N 
                    Query_11885  91   TGGATTGGATATATTAATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGAAGACACGTCCAAGAAC  180
V  96.3% (236/245)  IGHV4-59*02  139  ........G.....CT.........................................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  D  Y  D  Y  V  W  G  S 
                    Query_11885  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTACTACTGTGCGAGAGAAGATTATGATTACGTTTGGGGGAGT  270
V  96.3% (236/245)  IGHV4-59*02  229  ..................................................T..............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (27/27)   IGHD3-16*02  3    -------------------------------------------------------------------.......................  25

                                      ----------->                                  
                                       Y  L  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11885  271  TATCTCCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (27/27)   IGHD3-16*02  26   ....------------------------------------------  29
J  100.0% (39/39)   IGHJ4*02     10   -------.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_107265

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11886  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  98.4% (239/243)  IGHV4-59*01  49   ......................................................................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11886  91   TGGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  .........T................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_11886  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (18/20)    IGHD5-18*01  1    ----------------------------------------------------------------..........C.....T...------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11886  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_107261

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43D*01                                                                                          355     3e-100
IGHD1-26*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              106     3e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43D*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAA	GGCAAC	GTATAGTGGGACCTACTA	TCCGAATAG	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGGCAACGTATAGTGGGACCTACTATCCGAATAGTTACTACTACTACAACGCTATGGACGTC	AKATYSGTYYPNSYYYYNAMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  A  L  
                    Query_11887   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCGGGGAAGGCTCTCG  90
V  96.0% (237/247)  IGHV3-43D*01  47   ....................................................................................G...G.  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  S  L  I  T  W  G  P  V  S  T  Y  H  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_11887   91   AGTGGGTCTCTCTTATTACTTGGGGTCCTGTTAGCACATACCATGCAGACTCTGTGAGGGGTCGATTCACCATCTCCAGAGACAACAGCA  180
V  96.0% (237/247)  IGHV3-43D*01  137  ..................G.....A.GG..G......C...T...............A................................  226
                                       E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><---------------------------
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  A  T  Y  S  G  T  Y  
                    Query_11887   181  AAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACCGCCTTGTATTACTGTGCAAAGGCAACGTATAGTGGGACCTACT  270
V  96.0% (237/247)  IGHV3-43D*01  227  ...................................................................-----------------------  293
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  94.4% (17/18)    IGHD1-26*01   2    -------------------------------------------------------------------------...........G.....  18

                                       -CDR3-IMGT--------------------------->                                 
                                       Y  P  N  S  Y  Y  Y  Y  N  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11887   271  ATCCGAATAGTTACTACTACTACAACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  94.4% (17/18)    IGHD1-26*01   19   .----------------------------------------------------------------------  19
J  96.7% (59/61)    IGHJ6*02      2    ----------.............T...G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_107262

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           338     4e-95
IGHD3-3*01                                                                                            10.3    116  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGCGGAAA	GATTT	C	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGCGGAAAGATTTCCTACTTTGACTAC	ARRGKISYFDY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	229	13	0	94.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  H  G  S  I  S  G  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_11888  4    CCCTGAGACTCTCCTGCACTGTCTCTCATGGCTCCATCAGTGGTTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  94.6% (229/242)  IGHV4-59*01  50   .....TCC...A..............GG.............A...A......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  G  T  M  S  V  D  T  S  K  N  
                    Query_11888  94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGGCACCATGTCAGTAGACACGTCCAAGAACC  183
V  94.6% (229/242)  IGHV4-59*01  140  ............................................................T......A......................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  P  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  K  I  S  Y  F  D  Y  
                    Query_11888  184  AGTTCTCCCCGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGACGCGGAAAGATTTCCTACTTTGACTACT  273
V  94.6% (229/242)  IGHV4-59*01  230  .........T........G...........................................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (5/5)     IGHD3-3*01   8    ----------------------------------------------------------------------.....---------------  12
J  97.9% (46/47)    IGHJ4*02     2    ----------------------------------------------------------------------------..............  15

                                                                       
                                      W  G  L  G  T  L  V  T  V  S  S  
                    Query_11888  274  GGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.9% (46/47)    IGHJ4*02     16   ......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_266423

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           374     8e-106
IGHD2-2*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTAG	GTTCGCCTT	TTGTACTAGTACCAGCTGC	CATTCATCCCTACGCAAATCG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGGTTCGCCTTTTGTACTAGTACCAGCTGCCATTCATCCCTACGCAAATCGGACTAC	TRFAFCTSTSCHSSLRKSDY	249	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	112	2	0	98.2
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	246	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  S  F  G  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11889  1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCAGCTTTGGCAATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (246/253)  IGHV3-49*04  47   ....................................C......TG.............................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  A  F  G  G  A  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_11889  91   AGTGGGTAGGTTTCATTAGAAGCAAAGCTTTTGGTGGGGCAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  97.2% (246/253)  IGHV3-49*04  137  ..............................A.......A...................................................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  F  A  F  C  T  
                    Query_11889  181  ATTCCAAAAGCATCGCCTATCTGCAGATGAACAGCCTAAAAACCGAGGACACAGCCGTGTATTACTGTACTAGGTTCGCCTTTTGTACTA  270
V  97.2% (246/253)  IGHV3-49*04  227  .........................A...........G...................................-----------------  299
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  94.7% (18/19)    IGHD2-2*01   7    ----------------------------------------------------------------------------------.....G..  14

                                      ----CDR3-IMGT------------------------>                                  
                                      S  T  S  C  H  S  S  L  R  K  S  D  Y  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_11889  271  GTACCAGCTGCCATTCATCCCTACGCAAATCGGACTACTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  342
D  94.7% (18/19)    IGHD2-2*01   15   ...........-------------------------------------------------------------  25
J  97.5% (39/40)    IGHJ4*02     9    --------------------------------...........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_266421

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            369     2e-104
IGHD6-13*01                                                                                           18.0    0.59  
IGHJ6*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TTCCAGTT	TAGCAGCAG	AGTCGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATTCCAGTTTAGCAGCAGAGTCGGACTACGGTATGGACGTC	ARDSSLAAESDYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11890  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTACTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  97.2% (243/250)  IGHV3-7*03   47   .................................................T.......G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  S  Y  V  A  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11890  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATCCTATGTGGCGTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (243/250)  IGHV3-7*03   137  .......................................A........AC........................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  S  L  A  A  E  
                    Query_11890  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGGGATTCCAGTTTAGCAGCAGAGT  270
V  97.2% (243/250)  IGHV3-7*03   227  ...................................................................A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-13*01  6    ------------------------------------------------------------------------------.........---  14

                                      T------------------>                                 
                                      S  D  Y  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_11890  271  CGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACAGTCATCGTCTCCTCA  323
J  96.0% (48/50)    IGHJ6*02     13   ---..................................G....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_107269

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHD2-2*02                                                                                            14.1    8.3  
IGHJ3*01                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ3*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGGGCCCTAGAAG	GCTATAC	AGAG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGCCCTAGAAGGCTATACAGAGGCTTTTAATTTC	ARGGALEGYTEAFNF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  N  Y  Y  W  S  W  M  R  Q  P  P  G  K  G  L  E 
                    Query_11891  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAATTACTACTGGAGCTGGATGCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.2% (225/244)  IGHV4-59*01  49   ........................................G..G..................C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  *  F  Y  Y  G  G  N  T  D  Y  N  P  S  P  K  S  R  V  T  I  S  V  G  T  S  K  N 
                    Query_11891  91   TGGATTGGGTGATTCTATTACGGTGGAAACACCGACTACAACCCCTCCCCCAAGAGTCGAGTCACCATTTCAGTGGGCACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*01  139  ..........ATA........A....G.G....A...............T..................A.....A.A.............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  N  S  L  T  S  A  D  T  A  V  Y  Y  C  A  R  G  G  A  L  E  G  Y  T  E 
                    Query_11891  181  CAGTTCTCCCTGAAGCTGAACTCTCTGACGTCTGCGGACACGGCCGTATATTACTGTGCGAGAGGGGGGGCCCTAGAAGGCTATACAGAG  270
V  92.2% (225/244)  IGHV4-59*01  229  ...................G....G....CG................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD2-2*02   24   -------------------------------------------------------------------------------.......----  30

                                      ----------->                                  
                                       A  F  N  F  W  G  Q  G  A  A  V  T  V  S  S  
                    Query_11891  271  GCTTTTAATTTCTGGGGCCAAGGGGCAGCGGTTACCGTCTCTTCAG  316
J  87.0% (40/46)    IGHJ3*01     5    ......G..G..............A..AT...C.............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_266426

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           343     2e-96
IGHD2-15*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCAGATCAAA	GATCTTGTAGTGGT	AGACGGTGTTACCCCC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCAGATCAAAGATCTTGTAGTGGTAGACGGTGTTACCCCCTTGAGTAC	AKADQRSCSGRRCYPLEY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  A  M  S  W  V  R  Q  A  P  G  K  V  L  
                    Query_11892  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGCCATGAGCTGGGTCCGCCAGGCCCCAGGGAAGGTGCTGG  90
V  94.3% (233/247)  IGHV3-23*01  47   ...............................................T.........................T..........G.....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  A  S  D  D  G  T  Y  H  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_11892  91   AGTGGGTCTCGGCTATTAGTGCTAGTGATGATGGCACATACCACGCAGACTCCGTGAGGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.3% (233/247)  IGHV3-23*01  137  ..........A..........G.....G..G.A........T...............A................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  F  L  Q  M  S  R  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  D  Q  R  S  C  S  
                    Query_11892  181  AGAACACGCTGTTTCTGCAGATGAGCAGACTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGGCAGATCAAAGATCTTGTAGTG  270
V  94.3% (233/247)  IGHV3-23*01  227  ............A......A....A...C......................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD2-15*01  3    ------------------------------------------------------------------------------...A........  14

                                      IMGT--------------------->                                  
                                      G  R  R  C  Y  P  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11892  271  GTAGACGGTGTTACCCCCTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  92.9% (13/14)    IGHD2-15*01  15   ..----------------------------------------------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ------------------....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_266424

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            316     2e-88
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ6*01                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CGG	CTACGGTAACTAC	TTCGCT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCGGCTACGGTAACTACTTCGCTGGTATGGACGTC	AGYGNYFAGMDV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  E  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11893  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACGTTTGAGGATTATGCCATGCACTGGGTCCGCCAAGCCCCAGGGAAGGGCCTGG  90
V  91.4% (223/244)  IGHV3-9*01   47   ................................T....C.....T.......................G.....T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  R  I  S  W  T  S  G  T  I  D  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  D  A  
                    Query_11893  91   AGTGGGTCGCAAGGATTAGTTGGACGAGTGGAACTATAGACTATGCGGACTCTGTGAAGGGCCGATTCATCATCTCCAGAGACGACGCCA  180
V  91.4% (223/244)  IGHV3-9*01   137  ........T..G.T..........AT.....T.GC....G.............................C.............A......  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  G  Y  G  N  Y  F  A  G  
                    Query_11893  181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGAGAGTTGAAGACACGGCCCTGTATTATTGTGCCGGCTACGGTAACTACTTCGCTGGTA  270
V  91.4% (223/244)  IGHV3-9*01   227  ..........G.........................C...G.........T.......C.....--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  92.3% (12/13)    IGHD4-17*01  4    -------------------------------------------------------------------.......G.....----------  16
J  91.3% (42/46)    IGHJ6*01     18   --------------------------------------------------------------------------------------....  21

                                      ------->                                  
                                      M  D  V  W  G  Q  G  T  T  V  I  V  S  S  
                    Query_11893  271  TGGACGTCTGGGGACAAGGGACGACGGTCATCGTCTCATCAG  312
J  91.3% (42/46)    IGHJ6*01     22   .............G........C.......C......C....  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_43520

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAGTTAT	CAGGGT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGGCTCCACCCC	ARSGSGSYQGWLHP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  P  Y  Y  W  I  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11894  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGTCCTTACTACTGGATCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.1% (223/242)  IGHV4-59*01  49   ..................A............G..........AG...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  H  I  F  Y  T  G  S  T  K  Y  K  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  K 
                    Query_11894  91   TGGCTTGGCCATATCTTTTACACTGGGAGCACCAAATACAAGCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCCAGGAAG  180
V  92.1% (223/242)  IGHV4-59*01  139  ...A....GT......A.....G............C.....C..........................A...G............A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  S  Y  Q  G  W 
                    Query_11894  181  CAGTTCTCCCTGAAACTGCGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGG  270
V  92.1% (223/242)  IGHV4-59*01  229  ..............G...A.C.........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (15/15)   IGHD3-10*01  11   ------------------------------------------------------------------...............---------  25
J  87.0% (40/46)    IGHJ5*02     6    ---------------------------------------------------------------------------------------...  8

                                      -------->                                  
                                       L  H  P  W  G  L  G  R  L  V  I  V  S  S  
                    Query_11894  271  CTCCACCCCTGGGGCCTGGGAAGACTGGTCATCGTCTCCTCAG  313
J  87.0% (40/46)    IGHJ5*02     9    T..G............A.....CC.......C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_88813

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           294     6e-82
IGHD2-2*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCGGAGGGTTT	TTGTAGCGGTACAAGCCGCT	CCG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCGGAGGGTTTTTGTAGCGGTACAAGCCGCTCCGACTTTGACTTC	ARSEGFCSGTSRSDFDF	239	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	17	7	0	70.8
FR3-IMGT	125	238	114	103	11	0	90.4
CDR3-IMGT (germline)	239	243	5	5	0	0	100
Total	N/A	N/A	230	209	21	0	90.9


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  D  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  S 
                    Query_11895  14   TGTGCAGCCTCTGGATTCACCTTCAGTGATTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACAGT  103
V  90.9% (209/230)  IGHV3-48*03  64   ...........................AG............C..............................................T.  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  T  G  N  F  R  F  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  E  N  S  L  Y  L 
                    Query_11895  104  AGTAGTACTGGTAATTTTAGATTTTATGCCGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCGAGAACTCTCTTTATCTA  193
V  90.9% (209/230)  IGHV3-48*03  154  .......G.....G.ACC.T..AC..C..A........................A.................A.......A..G.....G  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><--------------------CDR3-IMGT---------------
                                       Q  M  S  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  S  E  G  F  C  S  G  T  S  R  S  D  F 
                    Query_11895  194  CAAATGAGCAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGGTCGGAGGGTTTTTGTAGCGGTACAAGCCGCTCCGACTTT  283
V  90.9% (209/230)  IGHV3-48*03  244  .......A...........C..............................----------------------------------------  293
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  80.0% (16/20)    IGHD2-2*01   7    --------------------------------------------------------------......TA....C...T...--------  26
J  95.6% (43/45)    IGHJ4*02     4    -------------------------------------------------------------------------------------.....  8

                                      ----->                                  
                                       D  F  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_11895  284  GACTTCTGGGGCCAGGGAACCCTGGTCAGCGTCTCCTCAG  323
J  95.6% (43/45)    IGHJ4*02     9    ....A.......................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_43521

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD2-2*01                                                                                            23.8    0.012 
IGHJ5*01                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATG	GGATATTGTAGCAGT	GTCATCTGTGATGGACCT	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGATATTGTAGCAGTGTCATCTGTGATGGACCTGACTCC	ARHMGYCSSVICDGPDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  T  F  G  T  Y
                    Query_11896  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTGGCACCTA  90
V  94.8% (276/291)  IGHV5-51*01  6    ....................................C........................A...............G....AC..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  K  Y  S  P
                    Query_11896  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGAGACGAAATACAGTCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ........G..................................................................T..C.G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11896  181  GTCCTTCCGAGGCCAGGTCACCATATCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  ........A...............C....C...............C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  M  G  Y  C  S  S  V  I  C  D  G  P  D  S  W  G  H  G  T  L  V  T  V
                    Query_11896  271  CATGTATTACTGTGCGAGACATATGGGATATTGTAGCAGTGTCATCTGTGATGGACCTGACTCCTGGGGCCACGGAACCCTGGTCACCGT  360
V  94.8% (276/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  93.3% (14/15)    IGHD2-2*01   2    -------------------------...........T...--------------------------------------------------  16
J  97.5% (39/40)    IGHJ5*01     12   ----------------------------------------------------------..............A.................  43

                                              
                                        S  S  
                    Query_11896  361  CTCCTCAG  368
J  97.5% (39/40)    IGHJ5*01     44   ........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_151022

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*06                                                                                           329     3e-92
IGHD3-9*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*06	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGTTTCCCATGGCT	ACTGGTCATT	GACTCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGTTTCCCATGGCTACTGGTCATTGACTCTTTTGACTCC	AKDRFPWLLVIDSFDS	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  V  S  G  F  T  F  S  R  S  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11897  1    GGTCCCTGAGACTCTCCTGTGAAGTGTCTGGATTCACCTTCAGTCGCTCTGCGATGCACTGGGTCCGCCAGGCCCCAGGCAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-33*06  47   .....................C..C...................A...A..GC....................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  A  D  G  T  K  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11897  91   AGTGGGTGGCAGTTATTTGGGCTGATGGAACTAAGACATACTATGCAGAGTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-33*06  137  ................A...TA........G...T.A............C........................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  I  V  Y  L  Q  M  D  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  R  F  P  W  L  L  
                    Query_11897  181  AGAACATTGTGTATCTGCAAATGGACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAAAGATCGTTTCCCATGGCTACTGG  270
V  92.0% (230/250)  IGHV3-33*06  227  ......CGC..............A................G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (9/10)     IGHD3-9*01   17   -------------------------------------------------------------------------------------.....  21

                                      T------------------>                                  
                                      V  I  D  S  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11897  271  TCATTGACTCTTTTGACTCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  324
D  90.0% (9/10)     IGHD3-9*01   22   .T...-------------------------------------------------  26
J  95.3% (41/43)    IGHJ4*02     6    -----------.......A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_104757

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD1-26*01                                                                                           18.0    0.70  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCGAGACGTCCCCTTAC	AGTGGGAACTAC	AACAAAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCGAGACGTCCCCTTACAGTGGGAACTACAACAAAGTACTACCACTACGGCATAGACGTC	ARHPRRPLTVGTTTKYYHYGIDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  S  Y
                    Query_11898  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCCGGATACAGCTTTATTAGTTA  90
V  94.5% (275/291)  IGHV5-51*01  6    ....................................C................................T.............CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  N  P
                    Query_11898  91   TTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCCGGTGACTCGGATACCAGATACAACCC  180
V  94.5% (275/291)  IGHV5-51*01  96   C........C.....................................................T........T.............G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  M  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  S  A
                    Query_11898  181  GTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACATGTCCATCAGCACCGCCTACCTCCAGTGGAGCAGCCTGAAGGCCTCGGACAGCGC  270
V  94.5% (275/291)  IGHV5-51*01  186  .......C...................A.C.....A.....................G............................C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        M  Y  Y  C  A  R  H  P  R  R  P  L  T  V  G  T  T  T  K  Y  Y  H  Y  G  I  D  V  W  G  L
                    Query_11898  271  CATGTATTACTGTGCGAGACATCCGAGACGTCCCCTTACAGTGGGAACTACAACAAAGTACTACCACTACGGCATAGACGTCTGGGGCCT  360
V  94.5% (275/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD1-26*01  6    ---------------------------------------.......G....---------------------------------------  17
J  93.0% (53/57)    IGHJ6*02     6    ----------------------------------------------------------......T.......T..G.............A  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_11898  361  AGGGACCACGGTCACCGTCTCCTCA  385
J  93.0% (53/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_190467

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            358     4e-101
IGHD6-19*01                                                                                           18.0    0.59  
IGHJ4*02                                                                                              58.4    9e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGTCCAC	TATAGTATTAGCTGGTAC	CACC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGTCCACTATAGTATTAGCTGGTACCACCTTGACTTC	ARGVHYSISWYHLDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  F  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11899  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTGACTATTTCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-7*01   47   ............................................AG.....GG.....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  N  E  Q  Y  Y  L  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11899  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAATGAGCAATATTATTTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (239/249)  IGHV3-7*01   137  ..............................G....A....C...G.............................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  V  H  Y  S  I  S  
                    Query_11899  181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGAGTCCACTATAGTATTAGCT  270
V  96.0% (239/249)  IGHV3-7*01   227  ....C................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  83.3% (15/18)    IGHD6-19*01  4    -----------------------------------------------------------------------------.....C.G.G...  16

                                      ---------------->                                  
                                      W  Y  H  L  D  F  W  G  Q  G  T  L  V  S  A  S  S  
                    Query_11899  271  GGTACCACCTTGACTTCTGGGGCCAGGGAACCCTGGTCAGTGCCTCCTCAG  321
D  83.3% (15/18)    IGHD6-19*01  17   .....----------------------------------------------  21
J  90.5% (38/42)    IGHJ4*02     7    ---------......A.......................CC.T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_190466

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           410     1e-116
IGHD1-20*01                                                                                           29.5    2e-04 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-20*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGAAAA	TATAACTGGAACGAC	GGAAT	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATC	ARVGKYNWNDGIAFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N  S  F
                    Query_11900  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAACAGCTT  90
V  95.2% (276/290)  IGHV1-69*01  6    ..................G.......................C........................................G.....A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  N  W  V  R  Q  A  P  G  H  G  P  E  W  M  G  G  I  I  P  I  F  G  T  T  K  Y  A  Q
                    Query_11900  91   TGCTGTCAACTGGGTGCGACAGGCCCCTGGACATGGGCCTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAACAAAATACGCACA  180
V  95.2% (276/290)  IGHV1-69*01  96   ....A...G........................A....T.....................................G....C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_11900  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGGACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.2% (276/290)  IGHV1-69*01  186  .............................................C....C.......................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  V  G  K  Y  N  W  N  D  G  I  A  F  D  I  W  G  Q  G  T  I  V  T  V  S
                    Query_11900  271  CGTTTATTATTGTGCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATCTGGGGCCAAGGGACAATAGTCACCGTCTC  360
V  95.2% (276/290)  IGHV1-69*01  276  ...G.....C..........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (15/15)   IGHD1-20*01  3    ----------------------------...............-----------------------------------------------  17
J  95.7% (45/47)    IGHJ3*02     4    ------------------------------------------------...T..........................G...........  45

                                           
                                        S  
                    Query_11900  361  TTCAG  365
J  95.7% (45/47)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_151023

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         349     3e-98
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAC	TACTATGATAGTAGTGGTT	CGTACTCCGAATC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACTACTATGATAGTAGTGGTTCGTACTCCGAATCTGATGCTTTTGATATC	ARHYYDSSGSYSESDAFDI	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	256	33	0	88.6


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  G  G  V  V  Q  P  G  K  S  L  R  L  S  C  E  V  S  G  F  T  F  S  S  F
                    Query_11901    1    GCAGCTGGTGCAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAAATCCCTGAGACTCTCCTGTGAAGTCTCTGGATTCACCTTCAGTTCTTT  90
V  88.6% (256/289)  IGHV3-30-3*01  6    ..........G..............................GG...................C..C...................AGC.A  95
                                          Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          G  F  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  S  F  D  G  D  N  R  L  Y  A  D
                    Query_11901    91   TGGTTTCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCTCTTATTTCTTTTGATGGAGACAACAGATTATACGCAGA  180
V  88.6% (256/289)  IGHV3-30-3*01  96   ..C.A.G............................................AG....A..A.A.......AG...T.A..AC........  185
                                          A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  V  K  G  R  F  T  V  S  R  D  N  S  K  N  S  L  Y  L  Q  L  N  S  L  T  A  D  D  T  A
                    Query_11901    181  CTCCGTGAAGGGGCGATTCACCGTCTCGAGAGACAATTCCAAGAACTCGCTCTATCTACAACTGAACAGCCTGACAGCTGACGACACGGC  270
V  88.6% (256/289)  IGHV3-30-3*01  186  ............C.........A....C..................A....G.....G...A............G......G........  275
                                          S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                        ------------><-----------------------CDR3-IMGT----------------------->                    
                                          V  Y  Y  C  A  R  H  Y  Y  D  S  S  G  S  Y  S  E  S  D  A  F  D  I  W  G  Q  G  T  L  V
                    Query_11901    271  TGTCTATTACTGTGCGAGACACTACTATGATAGTAGTGGTTCGTACTCCGAATCTGATGCTTTTGATATCTGGGGCCAGGGGACACTAGT  360
V  88.6% (256/289)  IGHV3-30-3*01  276  ...G...............-----------------------------------------------------------------------  294
                                          V  Y  Y  C  A  R                                                                        
D  100.0% (19/19)   IGHD3-22*01    5    ----------------------...................-------------------------------------------------  23
J  93.8% (45/48)    IGHJ3*02       1    ------------------------------------------------------........................A......A.G..  36

                                                    
                                          T  V  S  S
                    Query_11901    361  CACCGTCTCTTC  372
J  93.8% (45/48)    IGHJ3*02       37   ............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_190462

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           336     1e-94
IGHD3-22*01                                                                                           31.5    6e-05
IGHJ5*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTGGCCCTTCTTTTGGGGGAG	ACTATGATAGCAGTGGTTA	CCAGCAAGGGAC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCTGGCCCTTCTTTTGGGGGAGACTATGATAGCAGTGGTTACCAGCAAGGGACCTGGTTGGACCCC	ARAGPSFGGDYDSSGYQQGTWLDP	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  V  W  I  R  Q  A  P  G  K  G  L  
                    Query_11902  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGGTATGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-11*06  47   ........................................................AGC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  F  S  T  Y  T  S  Y  A  G  S  V  E  G  R  F  T  V  S  R  D  N  G  
                    Query_11902  91   AGTGGGTTTCATACATTAGTACTTTCAGTACTTACACAAGCTACGCAGGCTCTGTGGAGGGCCGTTTCACCGTCTCCAGAGACAACGGCA  180
V  93.2% (232/249)  IGHV3-11*06  137  .....................G.AGT....G........A........A.......A.......A......A...............C..  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  G  P  S  F  G  G  
                    Query_11902  181  GGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGCGAGCTGGCCCTTCTTTTGGGGGAG  270
V  93.2% (232/249)  IGHV3-11*06  227  A...................................................G............A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ----CDR3-IMGT------------------------------>                                  
                                      D  Y  D  S  S  G  Y  Q  Q  G  T  W  L  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11902  271  ACTATGATAGCAGTGGTTACCAGCAAGGGACCTGGTTGGACCCCTGGGGCCAGGGGGCCCTGGTCACCGTCTCCTCAG  348
D  94.7% (18/19)    IGHD3-22*01  6    ..........T........-----------------------------------------------------------  24
J  93.6% (44/47)    IGHJ5*02     5    -------------------------------......C.................AA.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_190461

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           346     2e-97
IGHD2-15*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGAGTCTGGACC	TGGTGGTA	ACATC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGAGTCTGGACCTGGTGGTAACATCGACTAC	ARHESGPGGNIDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  L  S  G  G  S  I  S  S  G  G  F  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_11903  1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGGCTCCATCAGCAGTGGTGGTTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.0% (236/251)  IGHV4-39*01  49   .....................G.......................A..A...A.......GG..............C............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  K  S  S  L  K  S  R  V  T  I  S  V  D  T  A 
                    Query_11903  91   CTGGAGTGGATTGGCAGTATCTATTATAGTGGGAGCACCTACTACAAGTCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGGCC  180
V  94.0% (236/251)  IGHV4-39*01  139  ..............G................................CC......................................T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  E  S  G  P  G  G 
                    Query_11903  181  AAGAACCAGTTCTCCCTGAAGGTGAGTTCTGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACATGAGTCTGGACCTGGTGGT  270
V  94.0% (236/251)  IGHV4-39*01  229  .....................C....C..........................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD2-15*01  13   -----------------------------------------------------------------------------------.......  19

                                      ----------->                                  
                                       N  I  D  Y  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_11903  271  AACATCGACTACTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  316
D  100.0% (8/8)     IGHD2-15*01  20   .---------------------------------------------  20
J  97.5% (39/40)    IGHJ4*02     9    ------......................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_190460

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD2-8*02                                                                                            14.1    9.4   
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGT	TACTGGT	ACCAACGCCAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTC	ARLVTGTNATYGLDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_11904  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAGCTA  90
V  98.3% (284/289)  IGHV5-51*03  6    .................................................................G........................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  R  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_11904  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGAGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ........G..................................T..............................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11904  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ...................................A.........C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  L  V  T  G  T  N  A  T  Y  G  L  D  V  W  G  Q  G  S  K  V  T  V  S  S
                    Query_11904  271  CATGTATTACTGTGCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTCTGGGGCCAAGGGAGCAAGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-8*02   10   ------------------------.......-----------------------------------------------------------  16
J  93.9% (46/49)    IGHJ6*02     14   ------------------------------------------.......A.....................C..C...............  61

                                       
                                       
                    Query_11904  361  A  361
J  93.9% (46/49)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_195666

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            304     9e-85
IGHD2-21*01                                                                                           12.2    31   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	TGGTGA	AGTATTCCTTGGATCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGGTGAAGTATTCCTTGGATCCCTTTGACCAC	ARLVKYSLDPFDH	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	19	8	0	70.4
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	100	14	0	87.7
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	220	26	0	89.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  N  D  L  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11905  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATTACCAATGATCTCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  89.4% (220/246)  IGHV4-4*02   49   ..................GC...........G......C.G..G.AG.AA........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  R  S  G  S  T  T  Y  N  P  S  L  Q  S  R  V  A  F  S  V  D  K  S  K 
                    Query_11905  91   GAGTGGATTGGAGAAATCTATCGTAGTGGGAGCACCACTTACAACCCGTCCCTTCAGAGTCGAGTCGCCTTCTCAGTAGACAAGTCCAAG  180
V  89.4% (220/246)  IGHV4-4*02   139  ...........G..........A..............AC..............CA...........A..A.A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  F  S  L  S  L  R  F  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  V  K  Y  S  L  D  P 
                    Query_11905  181  AACCAGTTCTCCCTGAGTCTGAGATTTGTGACCGCCGCCGATACGGCCGTATATTACTGTGCGAGATTGGTGAAGTATTCCTTGGATCCC  270
V  89.4% (220/246)  IGHV4-4*02   229  ................AG.....C.C............G..C........G...............------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-21*01  13   -------------------------------------------------------------------......-----------------  18
J  90.9% (40/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  H  W  G  Q  G  T  L  V  S  V  S  P  
                    Query_11905  271  TTTGACCACTGGGGCCAGGGAACCCTGGTCTCCGTTTCCCCAG  313
J  90.9% (40/44)    IGHJ4*02     6    ......T.......................A....C...T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_190468

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_11906  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_11906  91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_11906  181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_11906  271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_235321

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD5-18*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              75.7    5e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGCCATGGTTAC	GGAGGAG	TTGCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGCCATGGTTACGGAGGAGTTGCCTAC	ARYSHGYGGVAY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_11907  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAAAGACTGGAG  90
V  97.9% (238/243)  IGHV4-59*01  49   .........................................T......................................GG........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11907  91   TGGATTGGGTATATCTACTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  .................T........................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  G  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  A 
                    Query_11907  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGGCACGGCCGTGTATTACTGTGCGAGATACAGCCATGGTTACGGAGGAGTTGCC  270
V  97.9% (238/243)  IGHV4-59*01  229  .....................................A.........................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD5-18*01  6    ---------------------------------------------------------------......T........------------  20
J  97.6% (41/42)    IGHJ4*02     7    -------------------------------------------------------------------------------------...A.  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11907  271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.6% (41/42)    IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_235322

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           280     1e-77
IGHD3-9*01                                                                                            27.6    7e-04
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGGGGGGC	TGACTGGTTATTAT	CGAACGGGGACTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGGGGGGCTGACTGGTTATTATCGAACGGGGACTTT	AKDRGADWLLSNGDF	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	19	5	0	79.2
FR2-IMGT	51	101	51	43	8	0	84.3
CDR2-IMGT	102	125	24	20	4	0	83.3
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	233	206	27	0	88.4


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  I  F  Y  N  Y  G  F  L  W  V  R  Q  T  A  G  K  G  L  E  W  V  A  T  I 
                    Query_11908  15   TGTGCAGCCTCTGGATTCATTTTCTATAACTATGGCTTCCTCTGGGTCCGCCAGACTGCAGGCAAGGGGCTGGAGTGGGTGGCAACGATA  104
V  88.4% (206/233)  IGHV3-30*18  64   ...................CC...AG..G.......A.G.A.............G..C..........................GTT...  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  H  D  A  N  N  E  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  Q  N  T  V  Y  L 
                    Query_11908  105  TCACATGATGCAAATAATGAATATTATGCAGACTCAGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCCAGAACACGGTGTATCTG  194
V  88.4% (206/233)  IGHV3-30*18  154  ...T......G..G....A....C...........C....A...............................A........C........  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------CDR3-IMGT----------------->
                                       Q  M  D  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  R  G  A  D  W  L  L  S  N  G  D  F 
                    Query_11908  195  CAAATGGACAGCCTGAGACCTGAAGACACGGCTGTCTACTACTGTGCGAAAGATCGGGGGGCTGACTGGTTATTATCGAACGGGGACTTT  284
V  88.4% (206/233)  IGHV3-30*18  244  ......A...........G....G...........G..T..............-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (14/14)   IGHD3-9*01   15   --------------------------------------------------------------..............--------------  28

                                                                      
                                       W  G  Q  G  T  L  V  T  V  S  S
                    Query_11908  285  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  316
J  100.0% (32/32)   IGHJ4*02     15   ................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_235323

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           300     9e-84
IGHD2-2*01                                                                                            12.2    34   
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGACCCGTGTCTCAGAGGAG	TATGCC	AACGTGAAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATTTGACCCGTGTCTCAGAGGAGTATGCCAACGTGAATTACTTCTATTACGGTATGGACGTC	ARDLTRVSEEYANVNYFYYGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  A  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_11909  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAGTTACGCTATGCACTGGGTCCGCCAGGCCCCTGGCAGGGGACTGG  90
V  88.4% (221/250)  IGHV3-30*04  47   ...........................................T..C..T.......................T..A....A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  S  S  L  D  G  K  K  T  D  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_11909  91   AGTGGGTGGCAGTTTCATCACTTGATGGGAAGAAAACAGACTACGCGGACTCTGTGAGGGGCCGCTTCACCATCTCCAGAGACAATTCCA  180
V  88.4% (221/250)  IGHV3-30*04  137  ..............AT....TA......A.GT..T.A.T.......A.....C....A......A.........................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  T  S  L  R  A  E  D  T  A  V  Y  Y  Y  A  R  D  L  T  R  V  S  E  
                    Query_11909  181  AGAACACACTTTATCTACAAATGACCAGCCTGCGAGCTGAGGACACGGCTGTCTATTACTATGCAAGAGATTTGACCCGTGTCTCAGAGG  270
V  88.4% (221/250)  IGHV3-30*04  227  .......G..G.....G.......A.......A...................G.......G...G.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      --CDR3-IMGT----------------------------->                                 
                                      E  Y  A  N  V  N  Y  F  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_11909  271  AGTATGCCAACGTGAATTACTTCTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  344
D  100.0% (6/6)     IGHD2-2*01   26   --......------------------------------------------------------------------  31
J  94.7% (54/57)    IGHJ6*02     6    -----------------....A...C....................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_233871

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            324     7e-91
IGHD4-17*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	25	2	0	92.6
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  
                    Query_11910  1    GGTCCCTGAGACTCTCCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGC  90
V  92.2% (226/245)  IGHV4-4*02   47   ..A.....TCC...A......C........................T..T........................C...............  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  
                    Query_11910  91   TGGAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCG  180
V  92.2% (226/245)  IGHV4-4*02   137  .....................A..A..............A................A................A..........A....A  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      E  N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  
                    Query_11910  181  AGAACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTT  270
V  92.2% (226/245)  IGHV4-4*02   227  ..................AG....G........................................-------------------------  291
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD4-17*01  5    --------------------------------------------------------------------------.......---------  11
J  95.7% (44/46)    IGHJ6*02     17   -------------------------------------------------------------------------------------....A  21

                                      ------->                                 
                                      L  D  V  W  G  Q  G  T  T  V  P  V  S  S 
                    Query_11910  271  TGGACGTCTGGGGCCAAGGGACCACGGTCCCCGTCTCCTCA  311
J  95.7% (44/46)    IGHJ6*02     22   .............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_43526

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHD2-21*01                                                                                           19.9    0.16 
IGHJ3*01                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-21*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGGCTCCC	CATCTTGTGGTGG	GGAAAACTCCTCGTCATGTTC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCCGGCTCCCCATCTTGTGGTGGGGAAAACTCCTCGTCATGTTCTTGAGGTC	VRDPAPHLVVGKTPRHVLEV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  R  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11911  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCAGCTATAGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  92.0% (230/250)  IGHV3-21*01  47   ...........................................T........C................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  N  S  N  G  N  N  I  K  Y  A  D  S  M  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11911  91   AGTGGGTCTCCTCCATTAATAGTAACGGAAATAATATAAAGTACGCAGACTCAATGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.0% (230/250)  IGHV3-21*01  137  ..........A.......G.....GTA.T.G.T.C...T.C............G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  L  N  S  L  R  A  E  D  T  G  V  Y  Y  C  V  R  D  P  A  P  H  L  V  
                    Query_11911  181  AGAACTCACTGTATCTGCAACTGAACAGCCTGAGAGCCGAGGACACGGGGGTTTATTACTGTGTGAGAGATCCGGCTCCCCATCTTGTGG  270
V  92.0% (230/250)  IGHV3-21*01  227  ....................A...........................CT..G..........C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD2-21*01  3    --------------------------------------------------------------------------------...A......  12

                                      R3-IMGT------------------------>                                
                                      V  G  K  T  P  R  H  V  L  E  V  W  G  Q  G  T  M  V  S  V  P  S
                    Query_11911  271  TGGGGAAAACTCCTCGTCATGTTCTTGAGGTCTGGGGCCAAGGGACAATGGTCAGCGTCCCTTC  334
D  92.3% (12/13)    IGHD2-21*01  13   ...-------------------------------------------------------------  15
J  92.5% (37/40)    IGHJ3*01     9    ------------------------....T.........................C....T....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_235326

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           399     3e-113
IGHD7-27*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGTCCTTTTA	CTAACTGGGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGTCCTTTTACTAACTGGGGTTGACTTT	AVLLLTGVDF	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	270	15	0	94.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  N  Y
                    Query_11912  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACAGCTTTACCAACTA  90
V  94.7% (270/285)  IGHV5-51*03  6    .............................................................A........................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  G  W  V  R  Q  R  P  G  E  G  L  E  W  M  G  L  I  Y  P  G  D  S  D  T  R  Y  N  S
                    Query_11912  91   CTTCATCGGCTGGGTGCGCCAGAGGCCCGGGGAAGGCCTGGAGTGGATGGGGCTCATTTATCCTGGTGACTCTGATACCAGGTACAACTC  180
V  94.7% (270/285)  IGHV5-51*03  96   ..GG...................T.......A....................A....C.......................A....G.C.  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11912  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.7% (270/285)  IGHV5-51*03  186  ...............G............................G..........C..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        I  Y  Y  C  A  V  L  L  L  T  G  V  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11912  271  CATTTATTACTGTGCAGTCCTTTTACTAACTGGGGTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  347
V  94.7% (270/285)  IGHV5-51*03  276  ...G...........--------------------------------------------------------------  290
                                        M  Y  Y  C  A                                                              
D  100.0% (10/10)   IGHD7-27*01  1    -------------------------..........------------------------------------------  10
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_149820

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           258     4e-71
IGHD2-15*01                                                                                           10.3    119  
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	ACATAATCCT	GCTGC	CAGAGGGGC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGACATAATCCTGCTGCCAGAGGGGCCAACTGGTTCGACCTC	ARGHNPAARGANWFDL	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	48	24	19	2	3	79.2
FR2-IMGT	49	99	51	44	7	0	86.3
CDR2-IMGT	100	120	21	18	3	0	85.7
FR3-IMGT	121	234	114	95	19	0	83.3
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	245	207	35	3	84.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  D  F  Y  G  G  S  F     D  S  Y  W  N  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_11913  1    ACCCTGTCCCTCACCTGCGATTTTTATGGTGGGTCCTT---TGATTCCTACTGGAATTGGATCCGCCAGACTCCAGGGAAGGGACTGGAG  87
V  84.5% (207/245)  IGHV4-34*01  49   ...................C.G.C..............CAG..G..A........GC............C.C...........G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  N  R  A  G  S  T  N  F  N  P  S  L  E  S  R  L  T  I  S  V  D  T  S  T  K 
                    Query_11913  88   TGGATTGCAGAAATCAATCGTGCTGGAAGCACCAACTTCAATCCGTCCCTCGAGAGTCGACTCACCATTTCAGTGGACACGTCCACGAAG  177
V  84.5% (207/245)  IGHV4-34*01  139  .......GG..........A.AG..............A...C.........A........G.......A.....A..........A...C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       R  F  S  L  R  L  N  S  L  N  A  A  D  T  G  V  Y  Y  C  A  R  G  H  N  P  A  A  R  G  A 
                    Query_11913  178  CGATTCTCCCTGAGGCTAAATTCTCTTAACGCCGCAGACACGGGTGTGTATTACTGTGCGCGAGGACATAATCCTGCTGCCAGAGGGGCC  267
V  84.5% (207/245)  IGHV4-34*01  229  .AG..........A...G.GC...G.G.C......G.......C................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (5/5)     IGHD2-15*01  21   ---------------------------------------------------------------------------.....----------  25
J  96.0% (48/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  D  L  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_11913  268  AACTGGTTCGACCTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  316
J  96.0% (48/50)    IGHJ5*02     3    .............C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_235328

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           332     4e-93
IGHD3-10*01                                                                                           43.0    2e-08
IGHJ5*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAC	TTACTATGGGTCGGGGAGTTTTTATAAC	TCCCCGT	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATACTTACTATGGGTCGGGGAGTTTTTATAACTCCCCGTACTGGTTTGACTCC	AKDTYYGSGSFYNSPYWFDS	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  A  M  N  W  V  R  Q  V  P  G  K  G  L  
                    Query_11914  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACACCTATGCCATGAACTGGGTCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-23*01  47   ..........................................G..G...........G..............C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  M  S  G  H  G  G  I  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11914  91   AGTGGGTCTCAGGCATGAGTGGTCATGGTGGTATCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.4% (231/250)  IGHV3-23*01  137  ............CT..T......AG........G....T...................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  S  T  L  Y  L  V  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  T  Y  Y  G  S  G  
                    Query_11914  181  AGAGCACGCTCTATCTGGTCATGAATAGCCTGAGAGCCGAGGACACGGCCGTTTACTACTGTGCGAAAGATACTTACTATGGGTCGGGGA  270
V  92.4% (231/250)  IGHV3-23*01  227  ...A......G......CAA.....C..........................A..T..............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.9% (26/28)    IGHD3-10*01  4    -------------------------------------------------------------------------.........T.......  20

                                      R3-IMGT------------------------>                                  
                                      S  F  Y  N  S  P  Y  W  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11914  271  GTTTTTATAACTCCCCGTACTGGTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  92.9% (26/28)    IGHD3-10*01  21   ...A.......-------------------------------------------------------  31
J  95.8% (46/48)    IGHJ5*01     4    ------------------.......C..............A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_235329

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-10*01                                                                                           37.2    1e-06
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TCAGACG	ATGGTTCGGGGAGTTATTA	ATGGTGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATCAGACGATGGTTCGGGGAGTTATTAATGGTGTTTTTGATGTC	ARDQTMVRGVINGVFDV	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  A  S  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11915  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGCTTCACACTATTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.4% (237/251)  IGHV4-31*03  49   ..............................................G.GGTT....C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  W  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  V  I  S  V  D  T  S 
                    Query_11915  91   CTGGAGTGGATTGGGTACATCTGGCACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTGTCATATCAGTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ......................ATT............................................AC...................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       Q  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  D  Q  T  M  V  R  G 
                    Query_11915  181  CAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCCTGTATTACTGTGCGAGGGATCAGACGATGGTTCGGGGA  270
V  94.4% (237/251)  IGHV4-31*03  229  A..................................................G................A..-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (19/19)   IGHD3-10*01  9    ------------------------------------------------------------------------------............  20

                                      MGT-------------------->                                  
                                       V  I  N  G  V  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11915  271  GTTATTAATGGTGTTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  328
D  100.0% (19/19)   IGHD3-10*01  21   .......---------------------------------------------------  27
J  100.0% (44/44)   IGHJ3*01     7    --------------............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_244151

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           229     3e-62
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	ARGLLIEDPNYVWGSFRRNHNCYTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	90	24	0	78.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	195	49	0	79.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  F  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  R  L  E 
                    Query_11916  1    ACCCTGTCCTTCACCTGCTCTGTGTCTGGTGACTCCATCGGGACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGAGACTGGAG  90
V  79.9% (195/244)  IGHV4-59*01  49   .........C........A....C.......G.......A.T.G..........AG....A.C........C.......A.G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  N  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_11916  91   TGGCTTGGCTTCTTCTTATCCACTGGCAACACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  79.9% (195/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G...G.G....A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  R  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  N  Y 
                    Query_11916  181  CAGTTGTCTCTCCGCCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCAACTAT  270
V  79.9% (195/244)  IGHV4-59*01  229  .....C..C..GAAG....G.TCT.....................GT.....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  R  G  T  P  V  T  V  S  S  
                    Query_11916  271  GTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCGAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  92.1% (35/38)    IGHJ3*01     13   --------------------------------------...........A.......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_151027

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           286     1e-79
IGHD2-2*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCCGCGGAAATG	CAGCTGCTATG	GTTGAAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCCGCGGAAATGCAGCTGCTATGGTTGAAATTGACTTC	AKVRGNAAAMVEIDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	216	33	0	86.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  D  K  Y  T  M  T  W  V  R  Q  P  P  G  K  G  L  
                    Query_11917  1    GGTCCCTGAGACTCTCCTGTGCAGCATCTGGATTCGCCTTTGACAAATATACCATGACGTGGGTCCGCCAGCCTCCAGGGAAGGGTCTAG  90
V  86.7% (216/249)  IGHV3-23*01  47   .........................C.........A.....AG..GC...G......GC............G.............G..G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  L  S  G  S  G  L  Y  S  Y  Y  A  A  S  V  K  G  R  F  T  I  S  R  E  N  S  
                    Query_11917  91   AGTGGGTCTCATCTCTTAGTGGTAGTGGTCTTTACTCATACTATGCAGCCTCTGTGAAGGGCCGATTCACCATCTCCAGAGAGAATTCCA  180
V  86.7% (216/249)  IGHV3-23*01  137  ...........G..A..............GG.AG.A.......C....A...C...........G.................C.......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      N  S  T  L  F  L  Q  M  T  S  L  R  S  E  D  T  A  V  Y  Y  C  A  K  V  R  G  N  A  A  A  
                    Query_11917  181  ACAGCACACTGTTTCTGCAAATGACCAGCCTCAGAAGCGAAGACACGGCCGTATATTACTGTGCGAAAGTCCGCGGAAATGCAGCTGCTA  270
V  86.7% (216/249)  IGHV3-23*01  227  .G.A...G....A...........A......G...GC...G............................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD2-2*01   19   ---------------------------------------------------------------------------------.........  27

                                      ---------------->                                  
                                      M  V  E  I  D  F  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_11917  271  TGGTTGAAATTGACTTCTGGGGCCAGGGAGTCTTGGTCACCGTCTCCTCAG  321
D  100.0% (11/11)   IGHD2-2*01   28   ..-------------------------------------------------  29
J  90.5% (38/42)    IGHJ4*02     7    ---------......A.............AC.C..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_125783

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           396     2e-112
IGHD4-17*01                                                                                           14.1    9.6   
IGHJ5*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCGACAAGGGGAGA	GTGACTA	GGTCAGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACAAGGGGAGAGTGACTAGGTCAGGCTGGTTCGACCCC	AADKGRVTRSGWFDP	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	72	3	0	96
CDR1-IMGT	77	100	24	24	0	0	100
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	292	3	3	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  P  E  V  R  E  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_11918  2    CAGGTGCAGCTGGTGCAGTCTGGGCCTGAGGTGAGGGAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  91
V  93.5% (272/291)  IGHV1-69*01  1    ........................G.........A.A.....................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  A  V  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  V  I  P  M  S  G  T  A  K  Y 
                    Query_11918  92   AGCTATGCTGTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTGGAGTGGATGGGAGGAGTCATCCCTATGTCTGGTACTGCAAAGTAC  181
V  93.5% (272/291)  IGHV1-69*01  91   .........A..................................T..............GA..........C.T......A.....C...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  F  T  S  T  G  Y  M  E  L  S  S  L  R  S  D  D 
                    Query_11918  182  GCACAGAAATTCCAGGGCAGAGTCACCATTACCGCGGACGAATTCACGAGCACAGGCTACATGGAGCTGAGCAGCCTGAGATCTGACGAC  271
V  93.5% (272/291)  IGHV1-69*01  181  ........G.................G................C...........C..............................G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  F  C  A  A  D  K  G  R  V  T  R  S  G  W  F  D  P  W  G  Q  G  T  L  V  T  V 
                    Query_11918  272  ACGGCCGTCTATTTTTGTGCGGCCGACAAGGGGAGAGTGACTAGGTCAGGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTC  361
V  93.5% (272/291)  IGHV1-69*01  271  ........G....AC......---------------------------------------------------------------------  291
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (7/7)     IGHD4-17*01  9    ------------------------------------.......-----------------------------------------------  15
J  100.0% (47/47)   IGHJ5*02     5    --------------------------------------------------........................................  44

                                             
                                       S  S  
                    Query_11918  362  TCCTCAG  368
J  100.0% (47/47)   IGHJ5*02     45   .......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_300027

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           360     1e-101
IGHD5-18*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGCCATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGCCATGGTTACGGAGGAGTTGACTAC	EIQPWLRRS*L	239	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	103	52	48	3	1	92.3
CDR2-IMGT	104	124	21	21	0	0	100
FR3-IMGT	125	238	114	114	0	0	100
CDR3-IMGT (germline)	239	244	6	6	0	0	100
Total	N/A	N/A	244	239	4	1	98


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><---------------------FR2-IMGT---------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  Y  Y  W  S  W  I  R  L  P  P  R  E  K  T  G 
                    Query_11919  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGTTACTACTGGAGCTGGATCCGGCTACCCCCCAGGGAAAAGACTGGA  90
V  98.0% (239/244)  IGHV4-59*01  49   .........................................T.........................-.G...........GG.......  137
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R   Q  P  P  G  K  G  L  E

                                      ------------><-----CDR2-IMGT-----><----------------------------------------------------FR3
                                       V  D  W  V  Y  L  L  Q  W  E  H  Q  L  Q  P  L  P  Q  E  S  S  H  H  I  S  R  H  V  Q  E 
                    Query_11919  91   GTGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAA  180
V  98.0% (239/244)  IGHV4-59*01  138  ..........................................................................................  227
                                        W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N

                                      -IMGT----------------------------------------------------><-------------CDR3-IMGT---------
                                       P  V  L  P  E  A  E  L  C  D  R  C  G  H  G  R  V  L  L  C  E  I  Q  P  W  L  R  R  S  * 
                    Query_11919  181  CCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGCCATGGTTACGGAGGAGTTGA  270
V  98.0% (239/244)  IGHV4-59*01  228  ................................................................--------------------------  291
                                        Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                           
D  93.3% (14/15)    IGHD5-18*01  6    ----------------------------------------------------------------......T........-----------  20
J  100.0% (42/42)   IGHJ4*02     7    --------------------------------------------------------------------------------------....  10

                                      --->                                  
                                       L  L  G  P  G  N  P  G  H  R  L  L   
                    Query_11919  271  CTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  308
J  100.0% (42/42)   IGHJ4*02     11   ......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_300020

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD3-10*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTTTCAGG	TACTATGGTTCGG	CGGATTCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTTCAGGTACTATGGTTCGGCGGATTCT	ARAFRYYGSADS	258	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	19	5	0	79.2
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	143	21	17	1	3	81
FR3-IMGT	144	257	114	102	12	0	89.5
CDR3-IMGT (germline)	258	264	7	7	0	0	100
Total	N/A	N/A	267	241	23	3	90.3


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  S  V  S  G  D  S  I  S  D  S  Y  F  S  W  I  R  
                    Query_11920  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCAGTGATTCGTACTTCAGCTGGATCCGGC  90
V  90.3% (241/267)  IGHV4-59*01  26   ................T.........................C...........G..........AG..AC....GG.............  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y     S  G  S  S  S  Y  N  P  S  L  K  S  R  V  T  
                    Query_11920  91   AGCCCCCAGGCAAGGGACTGGAGTGGATTGGGTATATCTAT---AGTGGGAGCTCCAGCTACAACCCCTCCCTCAAGAGTCGAGTCACCA  177
V  90.3% (241/267)  IGHV4-59*01  116  ..........G..............................TAC.........A...A................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  A  D  I  S  K  N  H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  T  Y  Y  C  A  R  A  
                    Query_11920  178  TATCAGCTGACATATCCAAGAACCACTTCTCCCTGAGGTTGACCTCTGTGACCGCTGCGGACACGGCCACATATTACTGTGCGAGAGCTT  267
V  90.3% (241/267)  IGHV4-59*01  206  ......TA....CG...........G..........A.C...G.........................GTG................---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      ----CDR3-IMGT------------>                                  
                                      F  R  Y  Y  G  S  A  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11920  268  TCAGGTACTATGGTTCGGCGGATTCTTGGGGCCAGGGAGCCCTCGTCACCGTCTCCTCAG  327
D  100.0% (13/13)   IGHD3-10*01  5    -----.............------------------------------------------  17
J  94.1% (32/34)    IGHJ4*02     15   --------------------------............A....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_92654

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           308     4e-86
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGGG	AGCAGTGGCTGGT	CGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGGGAGCAGTGGCTGGTCGGTTTGACTTC	AREGGAVAGRFDF	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	224	27	0	89.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  R  G  S  V  S  S  G  G  Y  H  W  S  W  I  R  Q  T  P  G  R  G 
                    Query_11921  1    ACCCTGTCCCTCACCTGCTCTGTCTCTCGTGGCTCCGTCAGCAGTGGGGGTTATCACTGGTCCTGGATCCGGCAGACCCCAGGCAGGGGA  90
V  89.2% (224/251)  IGHV4-61*08  49   ..................A........G...................T.....CT.....AG.............C.......G.A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  F  T  G  T  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  A  D  M  S 
                    Query_11921  91   CTGGAGTGGATTGGCTATATCCACTTCACTGGGACCACCAAGTACAACCCCTCCCTTAAGAGTCGAGTCAGCATATCAGCAGACATGTCC  180
V  89.2% (224/251)  IGHV4-61*08  139  ..............G......T.T.A..G.....G......C..............C.............C........T.....C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  A  V  A  G 
                    Query_11921  181  AAGAACCAATTCTCCCTGAACCTGAGGTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTGCGAGAGAGGGGGGAGCAGTGGCTGGT  270
V  89.2% (224/251)  IGHV4-61*08  229  ........G...........G.....C..........................G..T..C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD6-19*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------->                                  
                                       R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11921  271  CGGTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02     6    ---.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_300022

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           416     2e-118
IGHD7-27*01                                                                                           14.1    9.9   
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTCTCTACAGAACCGTCCTATGGGACA	CTAACTG	TGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCC	ARDPFSTEPSYGTLTVRFDP	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_11922  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAT  91
V  95.9% (278/290)  IGHV1-18*01  7    .....................................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       P  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  T  G  W  I  S  P  Y  N  G  D  T  N  Y  A  Q 
                    Query_11922  92   CCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGACGGGATGGATCAGCCCTTACAATGGTGACACAAATTATGCACAG  181
V  95.9% (278/290)  IGHV1-18*01  97   GG............................................T.............G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  D  L  R  S  L  T  S  D  D  T  A 
                    Query_11922  182  AAGTTCCAGGGCAGAGTCACCTTGACCACAGACACGTCCACGAGCACAGCCTACATGGACCTGAGGAGCCTGACATCTGACGACACGGCC  271
V  95.9% (278/290)  IGHV1-18*01  187  ...C.................A.............A.......................G.............G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------CDR3-IMGT------------------------>                  
                                       V  Y  Y  C  A  R  D  P  F  S  T  E  P  S  Y  G  T  L  T  V  R  F  D  P  W  G  Q  G  T  L 
                    Query_11922  272  GTGTATTACTGTGCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCCTGGGGCCAGGGAACCCTG  361
V  95.9% (278/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (7/7)     IGHD7-27*01  1    ---------------------------------------------------.......--------------------------------  7
J  97.8% (44/45)    IGHJ5*02     7    -------------------------------------------------------------.............................  35

                                                      
                                       V  T  V  S  T  
                    Query_11922  362  GTCACCGTCTCCACAG  377
J  97.8% (44/45)    IGHJ5*02     36   ............T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_133070

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*03                                                                                           305     3e-85
IGHD2-15*01                                                                                           10.3    128  
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATAGA	TC	AGGAT	GTGAACATACCCGCTGGCCTCCGGCTCCACTTT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATAGATCAGGATGTGAACATACCCGCTGGCCTCCGGCTCCACTTTTACGGTCTGGACGTC	AIDQDVNIPAGLRLHFYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	223	28	0	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  V  S  N  D  D  Y  F  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_11923  1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCGTCAGTAATGATGATTACTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  88.8% (223/251)  IGHV4-61*03  49   ..................A....C.................C.G..G.AG.....A..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  K  S  G  I  T  K  S  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_11923  91   CTGGAATGGATTGGCTACATCTCCAAAAGTGGGATCACCAAGTCCAACCCCTCCCTCAAGAGTCGAGTCTCCATCTCAGTTGACACGTCC  180
V  88.8% (223/251)  IGHV4-61*03  139  .....G........G..T....ATT.C.......G......C.A.........................A....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       T  N  R  F  S  L  K  L  T  S  V  T  A  V  D  T  A  V  Y  Y  C  A  I  D  Q  D  V  N  I  P 
                    Query_11923  181  ACGAACCGCTTCTCCCTGAAACTGACCTCTGTAACCGCTGTGGACACGGCCGTGTATTACTGTGCGATAGATCAGGATGTGAACATACCC  270
V  88.8% (223/251)  IGHV4-61*03  229  .A.....A............G....G......G.......C..........................G...-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD2-15*01  1    -------------------------------------------------------------------------.....------------  5

                                      CDR3-IMGT-------------------------->                                
                                       A  G  L  R  L  H  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_11923  271  GCTGGCCTCCGGCTCCACTTTTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  338
J  97.9% (46/47)    IGHJ6*02     15   ---------------------......A........................................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_244150

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            377     1e-106
IGHD3-16*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	TCGTCCCCGGAGATACATCTCCGG	GATTACG	ACCCATATCGTC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGATCGTCCCCGGAGATACATCTCCGGGATTACGACCCATATCGTCTGGACGTC	ARSSPEIHLRDYDPYRLDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	265	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  G  S  V  R  V  S  C  K  A  S  G  Y  T  F  S  A  Y
                    Query_11924  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGGCTCAGTGAGGGTCTCCTGCAAGGCTTCCGGATACACCTTCAGCGCCTA  90
V  91.7% (265/289)  IGHV1-2*04   6    .........................................C........A..................T.............C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        H  I  H  W  I  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  E  T  N  Y  T  Q
                    Query_11924  91   TCATATACACTGGATACGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGATGGATCAACCCTAATAGTGGTGAAACAAACTATACACA  180
V  91.7% (265/289)  IGHV1-2*04   96   CT....G......G.G.................A................................C.......GC.........G....  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  T  S  T  A  Y  M  G  L  S  R  V  R  S  D  D  P  A
                    Query_11924  181  GAAATTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCACCAGCACTGCCTACATGGGGCTGAGCAGGGTGAGATCTGACGACCCGGC  270
V  91.7% (265/289)  IGHV1-2*04   186  ...G.....................................T......A..........A..........C..............A....  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  S  S  P  E  I  H  L  R  D  Y  D  P  Y  R  L  D  V  W  G  Q  G  P  A  V
                    Query_11924  271  CATATATTACTGTGCGCGATCGTCCCCGGAGATACATCTCCGGGATTACGACCCATATCGTCTGGACGTCTGGGGCCAAGGGCCCGCGGT  360
V  91.7% (265/289)  IGHV1-2*04   276  .G.G............A..-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-16*01  8    -------------------------------------------.......----------------------------------------  14
J  95.1% (39/41)    IGHJ6*02     22   --------------------------------------------------------------....................A..A....  49

                                                   
                                        T  V  S  S 
                    Query_11924  361  CACCGTCTCCTCA  373
J  95.1% (39/41)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_300023

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           344     6e-97
IGHD2-21*02                                                                                           12.2    32   
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCCCCAGGAGGATTAG	GGTGAC	CACA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCCCCAGGAGGATTAGGGTGACCACATTTGACTAC	ARSPRRIRVTTFDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  I  V  S  G  A  S  V  S  S  G  N  Y  C  W  S  W  I  R  Q  P  P  G  R  G  
                    Query_11925  4    CCCTGAGACTCTCCTGCATTGTCTCTGGTGCCTCCGTCAGCAGTGGTAATTACTGCTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGAC  93
V  94.4% (234/248)  IGHV4-61*01  50   .....TCC...A......C...........G.................G.....A.............................A.....  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  F  Y  H  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  
                    Query_11925  94   TGGAGTGGATTGGGTATTTCTATCACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCA  183
V  94.4% (234/248)  IGHV4-61*01  140  .................A.....T..............A..................................A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  S  P  R  R  I  R  V  
                    Query_11925  184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCATGTATTACTGTGCGAGATCCCCCAGGAGGATTAGGGTGA  273
V  94.4% (234/248)  IGHV4-61*01  230  ..................................................G.................----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*02  14   -------------------------------------------------------------------------------------.....  18

                                      ------------->                                  
                                      T  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11925  274  CCACATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (6/6)     IGHD2-21*02  19   .-----------------------------------------------  19
J  100.0% (43/43)   IGHJ4*02     6    -----...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_277979

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     8e-121
IGHD5-18*01                                                                                           16.1    2.6   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTTCCCAACCGAAATGTCAAAAC	GTGGATAC	CTGCGCCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTCCCAACCGAAATGTCAAAACGTGGATACCTGCGCCCTCTAC	ARLSQPKCQNVDTCALY	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	282	11	0	96.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  
                    Query_11926  2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTTCCA  91
V  96.2% (282/293)  IGHV5-51*03  2    ..G...................................................................T...............A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_11926  92   GTTACTGGATCGTCTGGGTGCGCCAGATGCCGGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  181
V  96.2% (282/293)  IGHV5-51*03  92   .C..........G..................C..........................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  T  S  L  K  A  S  D  
                    Query_11926  182  GGCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGACCAGCCTGAAGGCCTCGGACA  271
V  96.2% (282/293)  IGHV5-51*03  182  .C..............................................................G....G....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  I  Y  Y  C  A  R  L  S  Q  P  K  C  Q  N  V  D  T  C  A  L  Y  W  G  Q  G  T  L  V  
                    Query_11926  272  CCGCCATTTATTATTGTGCGAGACTTTCCCAACCGAAATGTCAAAACGTGGATACCTGCGCCCTCTACTGGGGCCAGGGAACCCTGGTCA  361
V  96.2% (282/293)  IGHV5-51*03  272  .......G.....C.........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD5-18*01  1    -----------------------------------------------........-----------------------------------  8
J  97.4% (37/38)    IGHJ4*02     11   ----------------------------------------------------------------..........................  36

                                                  
                                      T  V  S  A  
                    Query_11926  362  CCGTCTCCGCAG  373
J  97.4% (37/38)    IGHJ4*02     37   ........T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_277978

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           367     6e-104
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11927  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11927  91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.2% (242/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_11927  181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  97.2% (242/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_11927  271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_277973

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           321     6e-90
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_11928  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_11928  91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_11928  181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.8% (225/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_11928  271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_277972

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           333     1e-93
IGHD5-18*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACAAGGGGATAA	CTATAGTTAC	GAATCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACAAGGGGATAACTATAGTTACGAATCT	AQGDNYSYES	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	241	2	2	0	0	100
Total	N/A	N/A	241	227	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  W  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11929  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTTGGAACTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.2% (227/241)  IGHV3-53*01  47   ............................................A.C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  A  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  K  
                    Query_11929  91   AGTGGGTCTCAGTCATTTATGCCGGTGGTAGCACATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  94.2% (227/241)  IGHV3-53*01  137  .............T......AG...............C..C........................................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------CDR3-IMGT---------> 
                                      K  V  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  Q  G  D  N  Y  S  Y  E  S  
                    Query_11929  181  AAGTGTTGTATCTTCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCACAAGGGGATAACTATAGTTACGAATCTT  270
V  94.2% (227/241)  IGHV3-53*01  227  .CAC.C.............G.........................................-----------------------------  287
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  90.0% (9/10)     IGHD5-18*01  11   -------------------------------------------------------------------------....G.....-------  20
J  97.1% (33/34)    IGHJ4*02     15   -----------------------------------------------------------------------------------------.  15

                                                                       
                                      W  G  R  G  T  L  V  T  V  S  S  
                    Query_11929  271  GGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  303
J  97.1% (33/34)    IGHJ4*02     16   ......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_277971

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           361     4e-102
IGHD3-3*01                                                                                            41.1    7e-08 
IGHJ3*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTCGCCAA	ATTACGATTTCTGGAATGGTTATTATA	TTACCAAAAAAGGA	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCGCCAAATTACGATTTCTGGAATGGTTATTATATTACCAAAAAAGGAGCTTTTGATATC	ARESPNYDFWNGYYITKKGAFDI	240	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	239	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11930  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  96.8% (239/247)  IGHV3-53*01  47   .........................................................G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  D  N  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_11930  91   AGTGGGTCTCAGTTATTTATAGCGGTGATAACACAGACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGGGACAATTCCAAGA  180
V  96.8% (239/247)  IGHV3-53*01  137  ...........................G..G....T........................................A.............  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------------C
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  S  P  N  Y  D  F  W  
                    Query_11930  181  ACACGCTGTATCTTCAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAGAGAGTCGCCAAATTACGATTTCTGGA  270
V  96.8% (239/247)  IGHV3-53*01  227  ................A................................G.................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  92.6% (25/27)    IGHD3-3*01   3    ---------------------------------------------------------------------------..........T....  17

                                      DR3-IMGT----------------------------->                                  
                                      N  G  Y  Y  I  T  K  K  G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_11930  271  ATGGTTATTATATTACCAAAAAAGGAGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  342
D  92.6% (25/27)    IGHD3-3*01   18   G...........------------------------------------------------------------  29
J  100.0% (46/46)   IGHJ3*02     5    --------------------------..............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_277976

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           294     7e-82
IGHD3-22*01                                                                                           14.1    8.8  
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGCCTGC	AGTAGTAATTACT	GTTATGACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGCCTGCAGTAGTAATTACTGTTATGACGACTACTTCTACGGTATGGACGTC	ARVACSSNYCYDDYFYGMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	96	18	0	84.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  T  G  N  Y  Y  W  T  W  I  R  Q  R  P  E  K  G 
                    Query_11931  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAACACTGGCAATTACTACTGGACCTGGATCCGCCAGCGCCCAGAGAAGGGC  90
V  87.6% (219/250)  IGHV4-31*03  49   ...............................G........G..G...TGG...........G..............A.....G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  N  G  I  T  Y  Y  S  P  S  L  R  G  R  I  A  I  S  V  D  R  S 
                    Query_11931  91   CTGGAGTGGATTGGATACATATATTACAATGGGATCACCTACTACAGCCCGTCCCTCCGGGGGCGAATTGCCATATCAGTAGACAGGTCT  180
V  87.6% (219/250)  IGHV4-31*03  139  ..............G.....C.......G.....G...........A..........AA.A.T...G..A...............C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  K  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  G  T  Y  Y  C  A  R  V  A  C  S  S  N  Y 
                    Query_11931  181  AAGAAACAATTCTCATTGAGGCTGAGCTCCGTGACTGCCGCGGACACGGGCACTTATTACTGTGCGAGAGTCGCCTGCAGTAGTAATTAC  270
V  87.6% (219/250)  IGHV4-31*03  229  .....C..G.....CC...A.........T...................C.GTG................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  84.6% (11/13)    IGHD3-22*01  17   ------------------------------------------------------------------------------...G..T.....  28

                                      DR3-IMGT------------------------>                                 
                                       C  Y  D  D  Y  F  Y  G  M  D  V  W  G  P  G  T  T  V  T  V  S  S 
                    Query_11931  271  TGTTATGACGACTACTTCTACGGTATGGACGTCTGGGGCCCAGGGACCACGGTCACCGTCTCCTCA  336
D  84.6% (11/13)    IGHD3-22*01  29   .-----------------------------------------------------------------  29
J  96.4% (54/56)    IGHJ6*02     7    ----------......A.......................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_277975

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-3*01                                                                                            10.3    117   
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GCTTG	ACGAT	CGCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGCTTGACGATCGCATACTACTTTGACTAC	ATGLTIAYYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_11932  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (242/250)  IGHV4-31*03  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  D  T  S 
                    Query_11932  91   CTAGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTTACCATATCACTAGACACGTCT  180
V  96.8% (242/250)  IGHV4-31*03  139  ..G.......................................................A...................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  D  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  L  T  I  A  Y  Y 
                    Query_11932  181  AAGGACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGCTTGACGATCGCATACTAC  270
V  96.8% (242/250)  IGHV4-31*03  229  ...A...............A.................................G.............G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-3*01   6    ---------------------------------------------------------------------------.....----------  10
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11932  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_277974

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           417     6e-119
IGHD3-3*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCAACCTGACTC	TTTTGGAGTGGTTAT	CTC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGGCAACCTGACTCTTTTGGAGTGGTTATCTCCTTTGACAAC	TRGQPDSFGVVISFDN	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  N  F  S  G  Y 
                    Query_11933  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAACTTTAGCGGCTAT  91
V  96.2% (278/289)  IGHV1-18*01  7    ............................................................................C.....C.A.....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  T  G  Y  N  G  K  R  N  Y  A  Q 
                    Query_11933  92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCACCGGTTACAATGGTAAAAGAAACTATGCACAG  181
V  96.2% (278/289)  IGHV1-18*01  97   ..................................................A.......G..C............C.C.............  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  D  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_11933  182  AATCTCCAGGACAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.2% (278/289)  IGHV1-18*01  187  ..G.......G...............................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  T  R  G  Q  P  D  S  F  G  V  V  I  S  F  D  N  W  G  Q  G  T  L  V  T  V  S 
                    Query_11933  272  GTGTATTACTGTACGAGAGGGCAACCTGACTCTTTTGGAGTGGTTATCTCCTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  361
V  96.2% (278/289)  IGHV1-18*01  277  ............G......-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (15/15)   IGHD3-3*01   11   --------------------------------...............-------------------------------------------  25
J  97.7% (43/44)    IGHJ4*02     5    --------------------------------------------------.......T................................  44

                                          
                                       S  
                    Query_11933  362  TCAG  365
J  97.7% (43/44)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_29029

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*02                                                                                           297     7e-83
IGHD3-10*01                                                                                           12.2    30   
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCCGGTGT	GGGGAG	ATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCCGGTGTGGGGAGATCTTGACTAC	AREPVWGDLDY	237	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	19	5	0	79.2
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	18	6	0	75
FR3-IMGT	123	236	114	106	8	0	93
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	232	211	21	0	90.9


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  Y  R  M  H  W  V  R  Q  A  P  E  K  G  L  E  Y  V  A  A  I  
                    Query_11934  13   GTGCAGCCTCTGGATTCACCTTCAGTTCCTATAGGATGCACTGGGTCCGCCAGGCTCCAGAGAAGGGACTGGAATATGTTGCAGCTATTA  102
V  90.9% (211/232)  IGHV3-64*02  65   ..........................AG....GCT.........................G...................T.........  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  Y  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      T  E  N  G  G  T  T  F  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  F  L  
                    Query_11934  103  CTGAAAATGGGGGAACCACATTTTATACAGACTCTGTGAAGGGCAGATTCACTATCTCCAGAGACAATTCCAAGAACACGCTGTTCCTTG  192
V  90.9% (211/232)  IGHV3-64*02  155  G.AGT........T.G.....A....G.........................C...............................AT...C  244
                                      S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------CDR3-IMGT----------->             
                                      E  M  G  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  E  P  V  W  G  D  L  D  Y  W  G  Q  G  
                    Query_11934  193  AAATGGGCAGCCTGAGAGTTGAGGACACGGCTGTGTATTACTGTGCGAGAGAGCCGGTGTGGGGAGATCTTGACTACTGGGGCCAGGGAA  282
V  90.9% (211/232)  IGHV3-64*02  245  ..................C........T........................--------------------------------------  296
                                      Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                                         
D  100.0% (6/6)     IGHD3-10*01  16   ------------------------------------------------------------......------------------------  21
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------------------------.....................  27

                                                           
                                      T  L  V  T  V  S  S  
                    Query_11934  283  CCCTGGTCACCGTCTCATCAG  303
J  97.6% (41/42)    IGHJ4*02     28   ................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_29028

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         313     2e-87
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCG	TGTAGTTGTTCCAGCT	AATATCAAAATTTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATCGTGTAGTTGTTCCAGCTAATATCAAAATTTCCTACGGAATGGACGTC	ARDRVVVPANIKISYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	225	25	0	90


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  E  A  S  G  F  I  F  S  T  Y  H  M  H  W  V  R  Q  T  P  G  K  G  L  
                    Query_11935    1    GGTCCCTGAGACTCTCCTGTGAAGCGTCTGGATTCATCTTCAGTACCTATCATATGCACTGGGTCCGCCAGACTCCAGGCAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-30-3*01  47   .....................C...C..........C........G....GC...................G..................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  L  I  S  Y  D  G  S  N  T  Y  F  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11935    91   AGTGGGTGGCACTTATCTCCTATGATGGAAGCAACACATACTTCACAGACTCCGTAAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  90.0% (225/250)  IGHV3-30-3*01  137  ...........G....A..A..............T.A.....A.G..........G..................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                        K  N  T  L  Y  L  H  M  D  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  D  R  V  V  V  P  A  
                    Query_11935    181  AGAATACACTTTATCTACATATGGACAGCCTGAGACCTGAAGACACGGCTGTCTATTACTGTGCCAGAGATCGTGTAGTTGTTCCAGCTA  270
V  90.0% (225/250)  IGHV3-30-3*01  227  ....C..G..G.....G..A...A...........G....G...........G...........G.....--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD2-2*01     8    -------------------------------------------------------------------------......A..A......-  23

                                        -IMGT----------------------->                                 
                                        N  I  K  I  S  Y  G  M  D  V  W  G  P  G  T  T  V  A  V  S  S 
                    Query_11935    271  ATATCAAAATTTCCTACGGAATGGACGTCTGGGGCCCAGGGACCACGGTCGCCGTCTCCTCA  332
J  93.9% (46/49)    IGHJ6*02       14   -------------......T................A.............A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_29020

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           347     7e-98
IGHD5-12*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGGGAGGC	GGCTACGATT	CTATCCTCGGT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGGAGGCGGCTACGATTCTATCCTCGGTCTACGACTACGCTATGGACGTC	ASGEAATILSSVYDYAMDV	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	232	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  F  Y  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_11936  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  95.9% (232/242)  IGHV4-59*01  49   ...........................................G..A................................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  Y  Y  S  G  R  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_11936  91   TGGATTGGGTCTATTTATTACAGTGGGAGGACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCGTATCAGTTGACACGTCCAAGAAC  180
V  95.9% (232/242)  IGHV4-59*01  139  ..........A...C..............C....................................A.......A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  G  E  A  A  T  I  L  S  S 
                    Query_11936  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGCGGGGAGGCGGCTACGATTCTATCCTCG  270
V  95.9% (232/242)  IGHV4-59*01  229  ...................G.................................C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (10/10)   IGHD5-12*01  12   -----------------------------------------------------------------------..........---------  21

                                      ----------------------->                                 
                                       V  Y  D  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11936  271  GTCTACGACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  327
J  96.4% (53/55)    IGHJ6*02     8    --....T......G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_29023

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           396     2e-112
IGHD7-27*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGTCCTTTTA	CTAACTGGGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGTCCTTTTACTAACTGGGGTTGACTTT	AVLLLTGVDF	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	269	16	0	94.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  N  Y
                    Query_11937  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACAGCTTTACCAACTA  90
V  94.4% (269/285)  IGHV5-51*03  6    .............................................................A........................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  G  W  V  R  Q  R  P  G  E  G  L  E  W  M  G  L  I  Y  P  G  D  S  D  T  R  Y  N  S
                    Query_11937  91   CTTCATCGGCTGGGTGCGCCAGAGGCCCGGGGAAGGCCTGGAGTGGATGGGGCTCATTTATCCTGGTGACTCTGATACCAGGTACAACTC  180
V  94.4% (269/285)  IGHV5-51*03  96   ..GG...................T.......A....................A....C.......................A....G.C.  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  V
                    Query_11937  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGT  270
V  94.4% (269/285)  IGHV5-51*03  186  ...............G............................G..........C.................................C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        I  Y  Y  C  A  V  L  L  L  T  G  V  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11937  271  CATTTATTACTGTGCAGTCCTTTTACTAACTGGGGTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  347
V  94.4% (269/285)  IGHV5-51*03  276  ...G...........--------------------------------------------------------------  290
                                        M  Y  Y  C  A                                                              
D  100.0% (10/10)   IGHD7-27*01  1    -------------------------..........------------------------------------------  10
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_86552

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         383     1e-108
IGHD3-16*01                                                                                           12.2    34    
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	ATTATG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATGACTACTTTGACTAC	ARHYDYFDY	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  R  G  F  G  Y  S  F  T  S  F
                    Query_11938    1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGTTTTGGATACAGCTTTACCAGCTT  90
V  92.4% (267/289)  IGHV5-10-1*01  6    ....................C.........................................A.....C....................A  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  F  D  S  S  T  D  Y  T  P
                    Query_11938    91   CTGGATCACTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAGAATTGATCCTTTTGACTCTTCTACCGACTATACGCC  180
V  92.4% (267/289)  IGHV5-10-1*01  96   ........GC.........................................G..G.........AG........A....A....C.GC..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  N  N  S  I  S  T  A  Y  L  H  L  S  S  L  K  A  S  D  T  G
                    Query_11938    181  GTCATTCCAAGGCCACGTCACCATCTCAGCTAACAACTCCATCAGTACTGCCTACCTGCACTTGAGCAGCCTGAAGGCCTCGGACACCGG  270
V  92.4% (267/289)  IGHV5-10-1*01  186  ...C...........................G....G........C..............G.G..........................C  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------CDR3-IMGT-------->                                  
                                          M  Y  Y  C  A  R  H  Y  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11938    271  CATGTATTACTGTGCGAGACATTATGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  344
V  92.4% (267/289)  IGHV5-10-1*01  276  ...................-------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                        
D  100.0% (6/6)     IGHD3-16*01    3    --------------------......------------------------------------------------  8
J  100.0% (48/48)   IGHJ4*02       1    --------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_332604

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	276	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_11939  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  96.5% (276/286)  IGHV5-51*01  6    ..................................................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_11939  91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  96.5% (276/286)  IGHV5-51*01  96   ......................A.......G.............G..........................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_11939  181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAGCACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  96.5% (276/286)  IGHV5-51*01  186  ....................C...................A...........................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11939  271  CGTGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.5% (276/286)  IGHV5-51*01  276  .A..............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_332607

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         377     9e-107
IGHD3-10*01                                                                                           12.2    32    
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ATGTACGTACATAAA	GGGGAG	GC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAATGTACGTACATAAAGGGGAGGCTATGGACGTC	ARMYVHKGEAMDV	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	245	4	0	98.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_11940    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGTAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  98.4% (245/249)  IGHV4-30-4*01  49   ..................A......................C.......A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11940    91   CTGGAGTGGATTGGGTACATCTACTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  98.4% (245/249)  IGHV4-30-4*01  139  .......................T..................................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  M  Y  V  H  K  G  E 
                    Query_11940    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAATGTACGTACATAAAGGGGAG  270
V  98.4% (245/249)  IGHV4-30-4*01  229  .....................................................................---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01    16   ------------------------------------------------------------------------------------......  21

                                        ----------->                                 
                                         A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11940    271  GCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  315
J  100.0% (43/43)   IGHJ6*02       20   --...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_86551

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGGACAC	TGTAGTAGTGCCATCTGCGATG	GACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTAC	ARHMGHCSSAICDGPDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  Q  K  P  G  E  A  L  K  I  S  C  K  G  S  G  Y  S  F  G  S  Y
                    Query_11941  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGCAAAAGCCGGGGGAGGCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCAGTTA  90
V  95.9% (279/291)  IGHV5-51*01  6    ............................A.......C......T......................................AC...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  S  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_11941  91   CTGGATCGCCTGGGTGCGCCAGATGTCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G................C................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  P  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_11941  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTATCAGCACCGCCTACCCGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  .............................C.........C................T................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  M  G  H  C  S  S  A  I  C  D  G  P  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_11941  271  CATGTATTACTGTGCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  95.9% (279/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  86.4% (19/22)    IGHD2-2*01   8    -------------------------------.........A...G....T...-------------------------------------  29
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_11941  361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_86556

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_11942  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCCACTTA  90
V  96.2% (280/291)  IGHV5-51*01  6    ..................................................................................A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  P
                    Query_11942  91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  96.2% (280/291)  IGHV5-51*01  96   C.......G.................................................T.................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_11942  181  GTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  96.2% (280/291)  IGHV5-51*01  186  .......C.....................C...........................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_11942  271  CATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  96.2% (280/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  85.7% (12/14)    IGHD1-26*01  4    -----------------------------...G....A.....-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------......TA....................................  49

                                                   
                                        T  V  S  S 
                    Query_11942  361  CACCGTCTCGTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_332603

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ2*01                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTACTATAATCCTAGTGGTTTTTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACTATAATCCTAGTGGTTTTTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGFYGYWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  N  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11943  1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAATAATTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ...........................G............G..G...C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  D  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_11943  91   TGGATTGGGGACATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  .........T.T..............................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  F  Y 
                    Query_11943  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATTACTATAATCCTAGTGGTTTTTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.0% (21/25)    IGHD3-22*01  4    -----------------------------------------------------------------.......G..AG........A....  28

                                      -------------------->                                  
                                       G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11943  271  GGGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  325
J  100.0% (52/52)   IGHJ2*01     2    ---....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_86555

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           339     2e-95
IGHD5-12*01                                                                                           12.2    37   
IGHJ4*02                                                                                              52.6    6e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCGGATTTTCCTCTGATGGAC	GTGAATATA	TGACCCCGCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCGGATTTTCCTCTGATGGACGTGAATATATGACCCCGCTCTTTGACTTT	ARAGFSSDGREYMTPLFDF	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	63	6	0	91.3
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	252	35	0	87.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I  N  F 
                    Query_11944  2    CAGCTGGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGACGATCTCTTGCCAGGCTTCCGGTTACAGCTTTATCAACTTC  91
V  87.8% (252/287)  IGHV1-18*04  7    .......................G.........................A.G....C...A.......T.......C.....C..G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  R  G  L  E  W  L  G  W  I  S  A  H  R  G  D  T  K  Y  A  Q 
                    Query_11944  92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACGGGGGCTCGAATGGCTGGGATGGATCAGCGCGCACAGAGGTGACACAAAATATGCACAG  181
V  87.8% (252/287)  IGHV1-18*04  97   ...............................AA.....T..G...A................TT...AT...A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  F  L  D  V  R  S  L  R  S  D  D  T  A 
                    Query_11944  182  AGTTTCCAGGGCAGAGTCACCATGACCACAGACACACTCACGGGAACAGCGTTCCTGGACGTGAGGAGCCTGCGATCTGACGACACGGCC  271
V  87.8% (252/287)  IGHV1-18*04  187  .AGC................................TC....A.C.....C.A.A....GC...........A.................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  A  R  A  G  F  S  S  D  G  R  E  Y  M  T  P  L  F  D  F  W  G  Q  G  T  P  V 
                    Query_11944  272  GTTTATTACTGTGCGAGGGCCGGATTTTCCTCTGATGGACGTGAATATATGACCCCGCTCTTTGACTTTTGGGGCCAGGGAACCCCGGTC  361
V  87.8% (252/287)  IGHV1-18*04  277  ..G..............-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  88.9% (8/9)      IGHD5-12*01  1    ----------------------------------------...G.....-----------------------------------------  9
J  89.7% (35/39)    IGHJ4*02     5    -----------------------------------------------------------........AC................T....  35

                                              
                                       S  V  S
                    Query_11944  362  TCCGTCTC  369
J  89.7% (35/39)    IGHJ4*02     36   A.......  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_86558

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD7-27*01                                                                                           18.0    0.66  
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCCGCCGCGGCA	AACTGGGGA	T	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCGCCGCGGCAAACTGGGGATTGATGCTTTTCATATC	ARPRRGKLGIDAFHI	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_11945  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTCAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGTTA  90
V  96.2% (278/289)  IGHV5-51*03  6    ...........................G...........................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  G  W  V  R  Q  T  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_11945  91   CTTCATCGGCTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  96.2% (278/289)  IGHV5-51*03  96   ..GG...................T.........................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  S  G
                    Query_11945  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACAGCGG  270
V  96.2% (278/289)  IGHV5-51*03  186  ............................................G.........................................C..C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        I  Y  Y  C  A  R  P  R  R  G  K  L  G  I  D  A  F  H  I  W  G  Q  G  T  M  V  T  V  P  S
                    Query_11945  271  CATATATTATTGTGCGAGACCCCGCCGCGGCAAACTGGGGATTGATGCTTTTCATATCTGGGGCCAAGGGACAATGGTCACCGTCCCTTC  360
V  96.2% (278/289)  IGHV5-51*03  276  ...G.....C.........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (9/9)     IGHD7-27*01  3    --------------------------------.........-------------------------------------------------  11
J  96.0% (48/50)    IGHJ3*02     1    ------------------------------------------..........G................................T....  48

                                        
                                        
                    Query_11945  361  AG  362
J  96.0% (48/50)    IGHJ3*02     49   ..  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_86559

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            336     1e-94
IGHJ2*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	N/A	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	GCACGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCACGGATCCTGGTGCTTCGATTTC	ARHGSWCFDF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  N  T  Y  W  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_11946  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAATACCTACTGGATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-7*03   47   .....................C....................G..G...T......A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  T  D  G  S  T  Q  Y  Y  V  D  S  A  K  G  R  F  T  I  S  R  D  N  P  
                    Query_11946  91   AGTGGGTGGCCAACATAAAGACAGATGGAAGTACTCAATACTATGTGGACTCTGCGAAGGGCCGATTCACCATCTCCAGAGACAACCCCA  180
V  93.5% (231/247)  IGHV3-7*03   137  ....................CA..........GAGA..................T...............................G...  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      T  N  S  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  H  G  S  W  C  F  D  
                    Query_11946  181  CGAACTCACTGTATTTGCAACTGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGGCACGGATCCTGGTGCTTCGATT  270
V  93.5% (231/247)  IGHV3-7*03   227  A.............C.....A..............................................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  94.0% (47/50)    IGHJ2*01     4    ----------------------------------------------------------------------------.....A.......C  17

                                      ->                                  
                                      F  W  G  R  G  T  L  V  S  V  S  S  
                    Query_11946  271  TCTGGGGCCGTGGCACCCTGGTCAGTGTCTCCTCAG  306
J  94.0% (47/50)    IGHJ2*01     18   ........................C...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_332609

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_11947  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (226/248)  IGHV3-21*01  47   ............................T............AG...C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  G  
                    Query_11947  91   AGTGGGTCTCATCCATCAGTAGTAGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  91.1% (226/248)  IGHV3-21*01  137  ................T........T...AGT......T.C..C..A......G..A..............................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_11947  181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  91.1% (226/248)  IGHV3-21*01  227  ....C..................AA...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11947  271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_332608

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           333     1e-93
IGHD3-22*01                                                                                           23.8    0.011
IGHJ2*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CC	ATGATAGTAGTG	ACGACCACAATGGGTAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCATGATAGTAGTGACGACCACAATGGGTATTACTTCGAGATC	ARDHDSSDDHNGYYFEI	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	232	19	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  G  G  Y  F  W  N  W  I  R  Q  R  P  G  K  G 
                    Query_11948  1    ACCCTGTCCCTCACTTGCACTGTCTCTGGTGGCTCCATCAGCGGTGGTGGTTACTTCTGGAACTGGATCCGCCAGCGCCCAGGGAAGGGC  90
V  92.4% (232/251)  IGHV4-31*03  49   ..............C...........................A............A.....G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  A  S  T  Q  Y  N  P  S  L  K  G  R  V  T  I  S  A  D  T  S 
                    Query_11948  91   CTAGAGTGGATTGGGAACATCTTTTACAGTGCGAGCACCCAGTACAACCCGTCCCTCAAGGGTCGAGTTACCATATCAGCAGACACGTCT  180
V  92.4% (232/251)  IGHV4-31*03  139  ..G............T......A........G.......T.C..................A..................T..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  N  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  D  H  D  S  S  D  D 
                    Query_11948  181  AAGAATCAGTTCTCCCTGAAACTGAACTCCATGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGACCATGATAGTAGTGACGAC  270
V  92.4% (232/251)  IGHV4-31*03  229  .....C..............G....G...TG......................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD3-22*01  9    -------------------------------------------------------------------------............-----  20

                                      MGT-------------------->                                  
                                       H  N  G  Y  Y  F  E  I  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11948  271  CACAATGGGTATTACTTCGAGATCTGGGGCCGTGGCACCCTGGTCACCGTCTCCTCAG  328
J  93.5% (43/46)    IGHJ2*01     8    ------------........TC.........................T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_133076

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD1-1*01                                                                                            10.3    119  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTGGG	TGGAA	TTAACTTTGTCTAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTGGGTGGAATTAACTTTGTCTACGACTAC	AKDVGGINFVYDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  A  Y  A  M  S  W  V  R  Q  A  P  G  R  G  P  
                    Query_11949  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTTAGCGCCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAGGGGGCCGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ...............................A............AG............C......................A.....T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  T  G  G  R  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  S  D  N  S  
                    Query_11949  91   AGTGGGTCTCAACTATCAGTGGTACTGGTGGTAGAACATACTACGCAGACTCCGTGAAAGGCCGATTCACCATCTCCAGCGACAATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  ...........G....T.......G.........C.......................G.....G..............A..........  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  V  G  G  I  N  F  
                    Query_11949  181  AGAACACACTGTTTCTGCAAATGAACAGCCTCAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATGTGGGTGGAATTAACTTTG  270
V  93.6% (234/250)  IGHV3-23*01  227  .......G....A..................G......................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD1-1*01   9    ----------------------------------------------------------------------------.....---------  13

                                      ---------->                                  
                                      V  Y  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_11949  271  TCTACGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  315
J  97.5% (39/40)    IGHJ4*02     9    -----..................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_45730

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           290     2e-80
IGHD5-18*01                                                                                           10.3    118  
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	GGGCCGGCGAAG	ACAGC	G	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCCGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGRRRQRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	215	30	0	87.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_11950  1    ACCCTGTCCCTCACCTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  87.8% (215/245)  IGHV4-34*01  49   .......................CTA..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  A  M  S  V  D  T  S  K  K 
                    Query_11950  91   TGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCGCCATGTCAGTAGACACGTCCAAGAAA  180
V  87.8% (215/245)  IGHV4-34*01  139  ................A............CA.C.AC......C..T......A..........A....A....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  R  R  R  Q  R  N  W 
                    Query_11950  181  CAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCCGGCGAAGACAGCGCAACTGG  270
V  87.8% (215/245)  IGHV4-34*01  229  ..GT...........C..A......T.....................G.....C......A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (5/5)     IGHD5-18*01  7    -----------------------------------------------------------------------------.....--------  11
J  98.0% (49/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------.......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11950  271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (49/50)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_45737

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           375     3e-106
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTTGTGG	TACTCTGGTTCGGGGAGT	AAAACCCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTTGTGGTACTCTGGTTCGGGGAGTAAAACCCATTTTGACTAC	ARGLWYSGSGSKTHFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  I  W  I  R  Q  H  P  G  K  G 
                    Query_11951  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.0% (245/250)  IGHV4-31*03  49   .............................................................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_11951  91   CTGGAGTGGATTGGGTACATTTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATTTCAGTAGACACGTCT  180
V  98.0% (245/250)  IGHV4-31*03  139  ....................C.....................................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  G  T  A  V  Y  Y  C  A  R  G  L  W  Y  S  G  S 
                    Query_11951  181  AAGAACCAGTTCTCCCTGAAGCTGCGCTCTGTGACTGCCGCGGGCACGGCCGTGTATTACTGTGCGAGAGGTTTGTGGTACTCTGGTTCG  270
V  98.0% (245/250)  IGHV4-31*03  229  ........................A..................A..........................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  5    ------------------------------------------------------------------------------....A.......  16

                                      MGT-------------------->                                  
                                       G  S  K  T  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11951  271  GGGAGTAAAACCCATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  94.4% (17/18)    IGHD3-10*01  17   ......----------------------------------------------------  22
J  100.0% (43/43)   IGHJ4*02     6    ---------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_309472

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           336     1e-94
IGHD3-3*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGACATCCTT	TTACGATTT	N/A	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGACATCCTTTTACGATTTCTTCGACTTC	ARLTSFYDFFDF	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  V  S  S  G  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G 
                    Query_11952  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCGTCAGCAGTGGCAGTTACTACTGGAACTGGATCCGGCAGCCCCCCGGGAAGGGA  90
V  93.2% (232/249)  IGHV4-61*01  49   ..................A............................T.............G..................A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  R  T  N  N  N  P  S  L  K  N  R  V  T  I  S  V  D  T  S 
                    Query_11952  91   CTGGAGTGGATTGGGAATATCTATTACAGTGGGCGCACCAATAACAACCCGTCCCTCAAGAATCGAGTCACCATATCAGTAGACACGTCC  180
V  93.2% (232/249)  IGHV4-61*01  139  ...............T.................A.......CT.......C..........G............................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  H  Q  F  S  L  K  L  N  S  V  T  A  S  D  T  A  I  Y  Y  C  A  R  L  T  S  F  Y  D  F 
                    Query_11952  181  AAGCACCAGTTCTCCCTGAAGCTGAATTCTGTGACCGCGTCGGACACGGCCATTTATTACTGTGCGAGACTGACATCCTTTTACGATTTC  270
V  93.2% (232/249)  IGHV4-61*01  229  ...A.....................GC...........TG...........G.G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-3*01   4    --------------------------------------------------------------------------------.........-  12
J  86.4% (38/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  F  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_11952  271  TTCGACTTCTGGGGCCAGGGAATTTTAGTCACCGTCTCCTCAG  313
J  86.4% (38/44)    IGHJ4*02     6    ..T....A..............CCC.G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_45736

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*02                                                                                            396     2e-112
IGHD3-3*01                                                                                            48.8    4e-10 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAC	TT	GTATTACGATTTTTGGAGTGGTTAT	CACTACCGCTTCCG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACTTGTATTACGATTTTTGGAGTGGTTATCACTACCGCTTCCGCTTTGGCTAC	AHLYYDFWSGYHYRFRFGY	267	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	50	45	42	3	0	93.3
CDR1-IMGT	51	80	30	29	1	0	96.7
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	152	21	20	1	0	95.2
FR3-IMGT	153	266	114	113	1	0	99.1
CDR3-IMGT (germline)	267	272	6	6	0	0	100
Total	N/A	N/A	267	260	7	0	97.4


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  S  Q  T  P  T  L  T  C  T  F  S  G  L  S  L  S  T  S  G  V  G  E  G  W  I  R 
                    Query_11953  6    CTGGTGAAGCCCTCACAGACCCCCACGCTGACCTGCACCTTCTCTGGGCTCTCACTCAGCACTAGTGGAGTGGGTGAGGGCTGGATCCGT  95
V  97.4% (260/267)  IGHV2-5*02   31   ........A...A.........T.........................T...........................T.............  120
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R 

                                      ------FR2-IMGT---------------------><-----CDR2-IMGT-----><--------------------------------
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  E  D  K  R  Y  R  P  S  L  K  S  R  L  T 
                    Query_11953  96   CAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGGATGAAGATAAGCGCTACCGCCCATCTCTGAAGAGCAGGCTCACC  185
V  97.4% (260/267)  IGHV2-5*02   121  ..................................................T............A..........................  210
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  L  T 

                                      --------------------FR3-IMGT----------------------------------------------------><--------
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  L 
                    Query_11953  186  ATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACTTG  275
V  97.4% (260/267)  IGHV2-5*02   211  .......................................................................................---  297
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H    
D  100.0% (25/25)   IGHD3-3*01   1    -----------------------------------------------------------------------------------------.  1

                                      ---------------CDR3-IMGT----------------------->                                  
                                       Y  Y  D  F  W  S  G  Y  H  Y  R  F  R  F  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11953  276  TATTACGATTTTTGGAGTGGTTATCACTACCGCTTCCGCTTTGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  357
D  100.0% (25/25)   IGHD3-3*01   2    ........................----------------------------------------------------------  25
J  97.7% (43/44)    IGHJ4*02     5    --------------------------------------.....A......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_232651

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           293     2e-81
IGHD1-20*01                                                                                           10.3    119  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTCCGCCCGGGGGCGCCC	GGTAT	TC	CGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTCCGCCCGGGGGCGCCCGGTATTCCGGAATGGACGTC	ARSPPGGARYSGMDV	237	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	19	5	0	79.2
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	102	12	0	89.5
CDR3-IMGT (germline)	237	242	6	6	0	0	100
Total	N/A	N/A	231	209	22	0	90.5


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  N  T  C  P  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  D  I 
                    Query_11954  12   TGTGCAGCGTCTGGATTCACCTTCAATACCTGTCCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTTGCGGATATA  101
V  90.5% (209/231)  IGHV3-33*01  64   .........................G..G..A.GG.............................................G..A.T....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       W  S  D  G  S  N  Q  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  N  N  A  L  Y  L 
                    Query_11954  102  TGGTCTGATGGAAGTAATCAATATTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAACAACGCCCTGTATCTG  191
V  90.5% (209/231)  IGHV3-33*01  154  ....A.............A....C..T..A............................................G...A.G.........  243
                                       W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------CDR3-IMGT----------------->
                                       E  L  R  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  S  P  P  G  G  A  R  Y  S  G  M  D  V 
                    Query_11954  192  GAATTGAGGAGCCTGAGAGCCGAGGACACGGCTGTCTATTTCTGTGCGAGAAGTCCGCCCGGGGGCGCCCGGTATTCCGGAATGGACGTC  281
V  90.5% (209/231)  IGHV3-33*01  244  C..A...AC..........................G....A..........---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (5/5)     IGHD1-20*01  1    ----------------------------------------------------------------------.....---------------  5
J  95.7% (44/46)    IGHJ6*02     17   -----------------------------------------------------------------------------...T.........  29

                                                                       
                                       W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11954  282  TGGGGCCAAGGGACCACAGTCACCGTCTCCTCA  314
J  95.7% (44/46)    IGHJ6*02     30   .................G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_15929

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           360     1e-101
IGHD3-22*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCATCGACGAGAC	GATAGTAGTGGTTATT	TTGGGACCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATCGACGAGACGATAGTAGTGGTTATTTTGGGACCTTCTTTGACTCC	AKDHRRDDSSGYFGTFFDS	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  N  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11955  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTAACTATGGCATCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-30*18  47   ....................................C........G.........G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  T  V  I  S  F  D  G  S  D  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11955  91   AGTGGGTGACTGTTATATCATTTGATGGAAGTGATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  96.0% (240/250)  IGHV3-30*18  137  ........G.A..........A..........A....................................................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  H  R  R  D  D  S  
                    Query_11955  181  AGAACACACTATATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATCATCGACGAGACGATAGTA  270
V  96.0% (240/250)  IGHV3-30*18  227  .......G..G...........................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (16/16)   IGHD3-22*01  11   -----------------------------------------------------------------------------------.......  17

                                      -IMGT----------------------->                                  
                                      S  G  Y  F  G  T  F  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11955  271  GTGGTTATTTTGGGACCTTCTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (16/16)   IGHD3-22*01  18   .........------------------------------------------------------  26
J  97.7% (43/44)    IGHJ4*02     5    -------------------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_15928

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           397     8e-113
IGHD2-21*01                                                                                           18.0    0.68  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	G	ATTGCGGTGGTG	TAGTGATGGAACTTGTTCCTCTGGTTCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTCCTCTGGTTCATTTGAGTAT	ARRLRWCSDGTCSSGSFEY	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  K  F  T  S  Y
                    Query_11956  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAAGTTTACCAGCTA  90
V  93.8% (272/290)  IGHV5-51*01  6    ..............................A........G.....................................GC...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  F  P  R  D  S  D  T  R  Y  N  P
                    Query_11956  91   TTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTCGTGACTCCGATACCAGATATAACCC  180
V  93.8% (272/290)  IGHV5-51*01  96   C......................T...........................G.......A....G.......T...........C.G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  D  Q  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  D  S  L  K  A  S  G  T  A
                    Query_11956  181  GTCCTTCCAAGACCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTACCTGCAGTGGGACAGCCTGAAGGCCTCGGGCACCGC  270
V  93.8% (272/290)  IGHV5-51*01  186  ...........G.......................A............................AG.................A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  R  L  R  W  C  S  D  G  T  C  S  S  G  S  F  E  Y  W  G  Q  G  T  L  V
                    Query_11956  271  CATTTATTACTGTGCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTCCTCTGGTTCATTTGAGTATTGGGGCCAGGGAACCCTGGT  360
V  93.8% (272/290)  IGHV5-51*01  276  ...G................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD2-21*01  6    ---------------------....T.......---------------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------------------------.....C..C....................  34

                                                    
                                        T  V  S  S  
                    Query_11956  361  CACCGTCTCCTCAG  374
J  95.3% (41/43)    IGHJ4*02     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_45735

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           333     1e-93
IGHD3-10*01                                                                                           23.8    0.011
IGHJ5*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCCCCCATTG	GGTTCGGGGAGT	ATTGGAG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCCCCCATTGGGTTCGGGGAGTATTGGAGCTGGTTCGACTCC	AKPPIGFGEYWSWFDS	239	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	22	2	0	91.7
FR3-IMGT	125	238	114	108	6	0	94.7
CDR3-IMGT (germline)	239	244	6	6	0	0	100
Total	N/A	N/A	231	222	9	0	96.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  V 
                    Query_11957  14   TGTGCAGCCTCTGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTGTA  103
V  96.1% (222/231)  IGHV3-30*18  64   ............................G..........................................................A..  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  F  D  G  S  N  K  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_11957  104  TCATTTGATGGAAGTAATAAATACTATACAGACTCGGTGAAGGGCCGATTCACCATTTCCAGAGACAACTCCAAGAACACGCTGTATCTG  193
V  96.1% (222/231)  IGHV3-30*18  154  ....A......................G.......C....................C...........T.....................  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  P  P  I  G  F  G  E  Y  W  S  W  F  D 
                    Query_11957  194  CAAATGAACAGCCTGAGAGTTGAGGACACGGCTGTATATTACTGTGCGAAACCCCCCATTGGGTTCGGGGAGTATTGGAGCTGGTTCGAC  283
V  96.1% (222/231)  IGHV3-30*18  244  ...................C...............G...............---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (12/12)   IGHD3-10*01  11   -------------------------------------------------------------............-----------------  22
J  95.7% (45/47)    IGHJ5*01     5    --------------------------------------------------------------------------------..........  14

                                      -->                                  
                                       S  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_11957  284  TCCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  320
J  95.7% (45/47)    IGHJ5*01     15   ...........A.......T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_15923

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           369     2e-104
IGHD2-15*01                                                                                           14.1    8.2   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGATGGA	CTACTCC	AGTTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGATGGACTACTCCAGTTCCTGACTAC	AKDRWTTPVPDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11958  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (243/250)  IGHV3-30*18  47   ....................................CC....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  D  G  S  N  I  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11958  91   AGTGGGTGGCACTTATATCATATGATGGCAGTAATATATACTATACAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  97.2% (243/250)  IGHV3-30*18  137  ...........G................A.......A.......G.............................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  R  W  T  T  P  V  
                    Query_11958  181  AGAACACACTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATCGATGGACTACTCCAGTTC  270
V  97.2% (243/250)  IGHV3-30*18  227  .......G..............................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD2-15*01  25   ------------------------------------------------------------------------------.......-----  31

                                      ------->                                  
                                      P  D  Y  W  G  Q  G  T  L  V  T  V  F  S  
                    Query_11958  271  CTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTTCTCAG  312
J  97.6% (40/41)    IGHJ4*02     8    -...................................C.....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_15921

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           366     2e-103
IGHD3-22*01                                                                                           16.1    2.5   
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCGTGGGGG	CTAAGATAGAAGTG	ACTGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGTGGGGGCTAAGATAGAAGTGACTGATGATGGCTTTGATATC	AGVGAKIEVTDDGFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	260	26	0	90.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  S  E  L  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  R  F  Y  G  H
                    Query_11959  1    GCAGCTGGTGCAGTCTGGATCAGAACTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGGTCTGGATACAGGTTTTACGGCCA  90
V  90.9% (260/286)  IGHV5-51*03  6    ...................G....GG........................A...............T...........C...AC.A..T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  T  I  Y  P  A  D  S  D  T  K  Y  S  P
                    Query_11959  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGACCATCTATCCTGCTGACTCTGATACCAAATACAGCCC  180
V  90.9% (260/286)  IGHV5-51*03  96   .....................................................T...........G..............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  D  G  H  I  T  I  S  A  D  K  S  I  S  T  A  Y  L  H  W  S  S  R  R  A  S  D  T  A
                    Query_11959  181  GTCCTTTGATGGCCACATCACCATCTCAGCCGACAAGTCCATCAGTACCGCTTACCTACACTGGAGCAGCCGGAGGGCCTCGGACACCGC  270
V  90.9% (260/286)  IGHV5-51*03  186  ......CC.A.....GG............................C.....C.....G..G..........T..A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        T  Y  Y  C  A  G  V  G  A  K  I  E  V  T  D  D  G  F  D  I  W  G  Q  G  T  M  V  T  V  S
                    Query_11959  271  CACATATTACTGTGCGGGCGTGGGGGCTAAGATAGAAGTGACTGATGATGGCTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTC  360
V  90.9% (260/286)  IGHV5-51*03  276  ..TG............--------------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                           
D  85.7% (12/14)    IGHD3-22*01  7    --------------------------...T.....T....--------------------------------------------------  20
J  96.0% (48/50)    IGHJ3*02     1    ---------------------------------------------.....CT......................................  45

                                           
                                        S  
                    Query_11959  361  TTCAG  365
J  96.0% (48/50)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_15925

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     6e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_11960  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_11960  91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_11960  181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_11960  271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_15924

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            276     3e-76
IGHD2-8*02                                                                                            14.1    8.7  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CC	GTGGTCTATG	TCAGCGCGTGGTCTACGTATTATTAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGTGGTCTATGTCAGCGCGTGGTCTACGTATTATTATTACGGTATGGACGTC	ARAVVYVSAWSTYYYYGMDV	239	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	20	4	0	83.3
FR2-IMGT	50	100	51	47	4	0	92.2
CDR2-IMGT	101	124	24	20	4	0	83.3
FR3-IMGT	125	238	114	98	16	0	86
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	232	204	28	0	87.9


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  D  Y  W  M  A  W  V  R  Q  G  P  G  K  G  L  E  W  V  A  N  I 
                    Query_11961  14   TGTGCAGCCTCTGGATTCACTTTTAGTGATTATTGGATGGCATGGGTCCGCCAGGGTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATA  103
V  87.9% (204/232)  IGHV3-7*03   64   ....................C......AGC.........AGC.............C..................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       K  Q  D  G  T  E  K  Y  Y  A  D  S  V  R  G  R  L  A  I  S  R  D  N  A  Q  N  T  A  F  L 
                    Query_11961  104  AAACAGGATGGAACTGAAAAATACTATGCGGACTCAGTGAGGGGCCGCCTCGCCATCTCCAGAGACAACGCCCAGAATACAGCATTTCTG  193
V  87.9% (204/232)  IGHV3-7*03   154  ..G..A.......G...G..........T......T....A......AT..A....................A....CT..CTG.A....  243
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------------------CDR3-IMGT----------
                                       Q  M  N  N  L  R  A  E  D  T  A  V  Y  F  C  A  R  A  V  V  Y  V  S  A  W  S  T  Y  Y  Y 
                    Query_11961  194  CAAATGAACAACCTGAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAGAGCCGTGGTCTATGTCAGCGCGTGGTCTACGTATTATTAT  283
V  87.9% (204/232)  IGHV3-7*03   244  ..........G........................G....A...........--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  90.0% (9/10)     IGHD2-8*02   15   ------------------------------------------------------.....G....--------------------------  24

                                      -------------->                                 
                                       Y  G  M  D  V  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_11961  284  TACGGTATGGACGTCTGGGGCCAAGGGACCGCGGTCACCGTCTCTTCA  331
J  95.8% (46/48)    IGHJ6*02     15   ..............................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_133075

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           315     5e-88
IGHD6-19*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCAAC	GGGTATAGAAGTGGC	AGATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCAACGGGTATAGAAGTGGCAGATAACTACTACTATGGTTTGGACGTC	AATGIEVADNYYYGLDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  H  G  M  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_11962  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAGTCATGGCATGCAGTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.0% (223/245)  IGHV3-30*03  47   ...........................................T..CT..........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  F  N  G  S  H  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_11962  91   AATGGTTGGCAGTTATCTCATTTAATGGAAGTCATACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  91.0% (223/245)  IGHV3-30*03  137  .G...G..........A....A.G........A...A...........................A......A..................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  A  L  Y  L  Q  M  A  S  L  R  S  A  D  T  A  V  Y  F  C  A  A  T  G  I  E  V  A  D  
                    Query_11962  181  AGAACGCACTGTATCTGCAAATGGCCAGCCTGAGATCTGCGGACACGGCTGTTTACTTCTGTGCGGCAACGGGTATAGAAGTGGCAGATA  270
V  91.0% (223/245)  IGHV3-30*03  227  .....A.G...............AA..........G...A............G..T.A.......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.3% (14/15)    IGHD6-19*01  1    ----------------------------------------------------------------------........C......-----  15

                                      GT-------------------->                                 
                                      N  Y  Y  Y  G  L  D  V  W  G  H  G  T  T  V  T  V  S  S 
                    Query_11962  271  ACTACTACTATGGTTTGGACGTCTGGGGCCACGGGACCACGGTCACCGTCTCCTCA  326
J  94.6% (53/56)    IGHJ6*02     7    ..........C...A................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_323125

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           357     1e-100
IGHD3-3*01                                                                                            33.4    1e-05 
IGHJ5*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCCCTAAGTG	ATTACGATTTTTGGAGT	TCGGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCCCTAAGTGATTACGATTTTTGGAGTTCGGGCTGGTTCGACCCC	AKPLSDYDFWSSGWFDP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11963  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCGACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-23*01  47   ..........................................G.AG.................................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  V  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11963  91   AGTGGGTCTCAGGTATTAGTGGTAGCGGTGGTGTCACAAACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (238/248)  IGHV3-23*01  137  ............C............T......AG....T...................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  P  L  S  D  Y  D  F  
                    Query_11963  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCTTATATTACTGTGCGAAACCCCTAAGTGATTACGATTTTT  270
V  96.0% (238/248)  IGHV3-23*01  227  ..................................................G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (17/17)   IGHD3-3*01   3    ------------------------------------------------------------------------------............  14

                                      GT-------------------->                                  
                                      W  S  S  G  W  F  D  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11963  271  GGAGTTCGGGCTGGTTCGACCCCTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (17/17)   IGHD3-3*01   15   .....----------------------------------------------------  19
J  97.9% (46/47)    IGHJ5*02     5    ----------....................A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_220596

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*02                                                                                           344     6e-97
IGHD5-18*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*02	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACGA	CGA	ACAGCTA	CGGCTTTCTCTCG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGACGAACAGCTACGGCTTTCTCTCGGACTAC	TTNSYGFLSDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  L  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11964  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTCTCTACACTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  94.7% (233/246)  IGHV3-64*02  47   ....................................C.......AG...TG.......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  A  N  G  G  N  T  F  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11964  91   AATATGTTTCAGCTATTAGTGCTAATGGGGGTAACACATTTTATGCAGAGTCTGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  94.7% (233/246)  IGHV3-64*02  137  ....................AG...........G.....A.........C........................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  V  G  S  L  R  A  E  D  M  A  V  Y  Y  C  T  T  N  S  Y  G  F  L  S  
                    Query_11964  181  AGAACACGCTGTATCTTCAAGTGGGCAGCCTGAGAGCTGAGGACATGGCTGTATATTACTGTACGACGAACAGCTACGGCTTTCTCTCGG  270
V  94.7% (233/246)  IGHV3-64*02  227  ....................A...............................G.........G...------------------------  292
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD5-18*01  7    ---------------------------------------------------------------------.......--------------  13
J  100.0% (40/40)   IGHJ4*02     9    -----------------------------------------------------------------------------------------.  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11964  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (40/40)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_83716

Length=309
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           246     2e-67
IGHD5-18*01                                                                                           14.1    7.5  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCAGC	ATACATCTCTGGT	CACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAGCATACATCTCTGGTCACCCCTAC	SAYISGHPY	227	253	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	18	6	0	75
FR2-IMGT	41	91	51	47	4	0	92.2
CDR2-IMGT	92	112	21	15	6	0	71.4
FR3-IMGT	113	226	114	102	12	0	89.5
Total	N/A	N/A	213	185	28	0	86.9


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-----CDR2-I
                                       S  G  F  P  V  S  V  H  Y  M  S  W  V  R  Q  A  P  G  R  G  L  E  W  V  S  A  I  L  T  S 
                    Query_11965  14   TCTGGATTCCCCGTCAGTGTACACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAGGGGACTGGAGTGGGTCTCAGCGATTCTTACCAGT  103
V  86.9% (185/213)  IGHV3-53*01  73   .....G...A........AGCA.................................A...G................TT...TA..G.G..  162
                                       S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G 

                                      MGT-----><----------------------------------------------------FR3-IMGT--------------------
                                       G  K  T  Y  Y  T  D  S  A  M  G  R  F  T  I  S  R  D  S  S  K  N  T  V  D  L  Q  M  N  S 
                    Query_11965  104  GGTAAGACATACTACACAGACTCCGCGATGGGCCGATTCACCATCTCCAGAGACTCTTCCAAGAACACAGTGGATCTTCAAATGAACAGC  193
V  86.9% (185/213)  IGHV3-53*01  163  ....GC.........G.........T..A.........................AA............GC..T.................  252
                                       G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S 

                                      --------------------------------><--------CDR3-IMGT-------->                              
                                       L  S  A  G  D  T  A  F  Y  Y  C  S  A  Y  I  S  G  H  P  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_11965  194  CTGAGCGCCGGGGACACGGCCTTCTATTACTGTTCAGCATACATCTCTGGTCACCCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  283
V  86.9% (185/213)  IGHV3-53*01  253  .....A....A..........G.G.........---------------------------------------------------------  285
                                       L  R  A  E  D  T  A  V  Y  Y  C                                                          
D  84.6% (11/13)    IGHD5-18*01  5    --------------------------------------.....G..A....---------------------------------------  17
J  100.0% (38/38)   IGHJ4*02     11   --------------------------------------------------------..................................  44

                                          
                                       S  
                    Query_11965  284  TCAG  287
J  100.0% (38/38)   IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 29776662


Query= Query_302104

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           313     1e-87
IGHD4-17*01                                                                                           12.2    31   
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGAAGAAAG	TACGGT	CA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATGGGAAGAAAGTACGGTCAGATGCTTTTGATATA	VRDGKKVRSDAFDI	239	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	20	4	0	83.3
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	22	2	0	91.7
FR3-IMGT	125	238	114	107	7	0	93.9
CDR3-IMGT (germline)	239	246	8	6	2	0	75
Total	N/A	N/A	232	216	16	0	93.1


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  A  F  S  G  S  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  
                    Query_11966  15   GTGCAGCCTCTGGATTCGCCTTCAGTGGTTCCTGGATGCACTGGGTCCGCCAAGCTCCTGGGAAGGGGCTGGTGTGGGTCTCACGTATTA  104
V  93.1% (216/232)  IGHV3-74*01  65   .................A........A.C.A...........................A...............................  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  G  D  G  S  G  T  N  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  A  Q  N  T  L  Y  L  
                    Query_11966  105  ATGGTGATGGGAGTGGCACAAACTACGCGGAATCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCCAGAACACACTGTATCTGC  194
V  93.1% (216/232)  IGHV3-74*01  155  ..A...........A......G.........C.......................................A.......G..........  244
                                      N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  R  D  G  K  K  V  R  S  D  A  F  D  I  W  
                    Query_11966  195  AAATGAACAGTCTGAGAGCCGATGACACGGCTGTATACTACTGTGTCAGAGATGGGAAGAAAGTACGGTCAGATGCTTTTGATATATGGG  284
V  93.1% (216/232)  IGHV3-74*01  245  ......................G...........G..T.......CA.....--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (6/6)     IGHD4-17*01  5    ---------------------------------------------------------------......---------------------  10
J  97.9% (46/47)    IGHJ3*02     2    -----------------------------------------------------------------------..............C....  20

                                                                  
                                      G  Q  G  T  M  V  T  V  S  S
                    Query_11966  285  GCCAAGGGACAATGGTCACCGTCTCTTC  312
J  97.9% (46/47)    IGHJ3*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_302107

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           290     2e-80
IGHD6-6*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTCTG	CTTAGTGGGTGGCCGTG	ATAGCAGCTCGTCC	GGCCTGAG	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TTAGTGGGTGGCCGTGATAGCAGCTCGTCCGGCCTGAGCGTC	LVGGRDSSSSGLSV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	241	113	102	11	0	90.3
Total	N/A	N/A	241	213	28	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  G  S  G  F  I  F  S  D  Y  G  V  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_11967  1    GGTCCCTGAGACTCTCCTGTTCAGGCTCTGGATTCATCTTCAGTGACTATGGTGTACAGTGGGTCCGCCAGGCTCCAGGAAAGGGACTGG  90
V  88.4% (213/241)  IGHV3-64*05  47   ........................C...........C.......AG.....C.A.G..C....................G..........  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  A  I  G  G  H  G  T  T  T  Y  Y  T  D  P  L  K  G  R  F  I  V  S  R  D  N  S  
                    Query_11967  91   AATTTGTTTCGGCTATTGGTGGTCATGGGACTACCACATACTACACAGACCCACTGAAGGGCAGATTCATCGTCTCCAGAGACAATTCCA  180
V  88.4% (213/241)  IGHV3-64*05  137  ...A......A......A..A..A.....GG..G..........G.....T..G...............C.A..................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  V  Y  L  Q  M  S  N  L  R  I  E  D  T  A  V  Y  F  C  L  V  G  G  R  D  S  S  S  
                    Query_11967  181  AGAACACGGTGTATCTTCAAATGAGCAATCTGAGAATTGAGGACACGGCTGTGTATTTCTGCTTAGTGGGTGGCCGTGATAGCAGCTCGT  270
V  88.4% (213/241)  IGHV3-64*05  227  ........C.....G............G.......GC....................A...-----------------------------  287
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y                                
D  100.0% (14/14)   IGHD6-6*01   5    ------------------------------------------------------------------------------............  16

                                      ------------->                                 
                                      S  G  L  S  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11967  271  CCGGCCTGAGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
D  100.0% (14/14)   IGHD6-6*01   17   ..---------------------------------------------  18
J  100.0% (37/37)   IGHJ6*02     26   ----------.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_302101

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           388     5e-110
IGHD6-6*01                                                                                            21.8    0.045 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCC	ATAGCAGCTCG	GATGGGGA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCATAGCAGCTCGGATGGGGAACTTTGACTCC	AAIAARMGNFDS	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	267	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  V  S  R  Y
                    Query_11968  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCCGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCGTCAGTAGGTA  90
V  93.4% (267/286)  IGHV1-69*01  6    ..................G.................T..........................................T....C..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        L  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  L  L  R  T  A  N  Y  A  Q
                    Query_11968  91   TCTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGATCATCCCTCTTTTAAGGACAGCAAACTACGCACA  180
V  93.4% (267/286)  IGHV1-69*01  96   .GC.................................G...........................A.C..TG.T.................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  H  E  S  T  S  T  V  Y  M  E  V  N  S  L  G  S  Q  D  T  A
                    Query_11968  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGCACGAATCCACGAGCACAGTCTACATGGAGGTGAACAGCCTGGGATCTCAGGACACGGC  270
V  93.4% (267/286)  IGHV1-69*01  186  ...............................G..................C..........C...G.......A.....G..........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  A  A  I  A  A  R  M  G  N  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11968  271  CGTGTATTACTGTGCGGCCATAGCAGCTCGGATGGGGAACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  351
V  93.4% (267/286)  IGHV1-69*01  276  ................-----------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                  
D  100.0% (11/11)   IGHD6-6*01   5    -------------------...........---------------------------------------------------  15
J  97.7% (42/43)    IGHJ4*02     4    --------------------------------------.........A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_302109

Length=317
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           297     7e-83
IGHD4-17*01                                                                                           16.1    2.0  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCG	ACGGTGAC	ACCGAGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACGGTGACACCGAGAATGACTAC	AADGDTENDY	230	259	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	21	3	0	87.5
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	232	3	3	0	0	100
Total	N/A	N/A	220	205	15	0	93.2


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  L  T  F  S  T  F  G  M  H  W  V  R  Q  P  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_11969  13   GTCTGGACTCACCTTCAGTACCTTTGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTACGA  102
V  93.2% (205/220)  IGHV3-33*01  72   .......T............G..A......................G........................................T..  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  K  E  Y  Y  T  D  S  V  K  G  R  F  I  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_11969  103  TGGAAGTAAGGAATACTATACAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCAAGAACACGTTGTATCTGCAGATGAA  192
V  93.2% (205/220)  IGHV3-33*01  162  .........TA........G........................C............................C..........A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------CDR3-IMGT--------->                       
                                        S  L  R  V  D  D  T  A  M  Y  F  C  A  A  D  G  D  T  E  N  D  Y  W  G  Q  G  T  L  V  T
                    Query_11969  193  CAGCCTGAGAGTCGACGACACGGCTATGTATTTCTGTGCGGCCGACGGTGACACCGAGAATGACTACTGGGGCCAGGGAACCCTGGTCAC  282
V  93.2% (205/220)  IGHV3-33*01  252  ...........C...G.........G......A.......--------------------------------------------------  291
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                   
D  100.0% (8/8)     IGHD4-17*01  6    --------------------------------------------........--------------------------------------  13
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------------------------..............................  37

                                                 
                                        V  S  S  
                    Query_11969  283  CGTCTCCTCAG  293
J  100.0% (41/41)   IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30621390


Query= Query_92651

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           329     3e-92
IGHD3-10*01                                                                                           21.8    0.042
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CAGTTTCTGTCTTAGTT	TGGTCCGGGGAGTT	TGTGGTGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGTTTCTGTCTTAGTTTGGTCCGGGGAGTTTGTGGTGGTTTTGATATC	ARGSFCLSLVRGVCGGFDI	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  N  G  G  S  F  N  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_11970  4    CCCTGAGACTCTCCTGTGCCGTCAATGGTGGGTCCTTCAATGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGGAGT  93
V  93.0% (227/244)  IGHV4-34*01  50   .....TCC...A....C..T...T...............G..G.......................................G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  Q  S  G  T  T  N  Y  K  P  S  L  K  S  R  V  T  T  S  V  D  T  S  K  N  
                    Query_11970  94   GGATTGGGGAAATCAATCAAAGTGGAACCACCAACTACAAGCCGTCCCTCAAGAGTCGAGTAACCACATCAGTGGACACGTCCAAGAACC  183
V  93.0% (227/244)  IGHV4-34*01  140  ...................T.......G............C....................C....T......A................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  F  C  L  S  L  V  R  
                    Query_11970  184  AGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCAGTTTCTGTCTTAGTTTGGTCCGGG  273
V  93.0% (227/244)  IGHV4-34*01  230  ..................G.............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  92.9% (13/14)    IGHD3-10*01  10   ---------------------------------------------------------------------------------....T....  18

                                      ---------------------->                               
                                      G  V  C  G  G  F  D  I  W  G  Q  G  T  M  E  T  V  S  
                    Query_11970  274  GAGTTTGTGGTGGTTTTGATATCTGGGGCCAAGGGACAATGGAAACCGTCTCTT  327
D  92.9% (13/14)    IGHD3-10*01  19   .....-------------------------------------------------  23
J  95.1% (39/41)    IGHJ3*02     7    -------------.............................TC..........  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_172514

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD6-19*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGCCCCCCGTACCGCA	TATAGCAGTGCCTG	CCACG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGCCCCCCGTACCGCATATAGCAGTGCCTGCCACGGACTAC	ARWPPVPHIAVPATDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  R  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11971  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTAGGTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.9% (238/243)  IGHV4-59*01  49   ......................................C.....T.............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  M  N 
                    Query_11971  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCATGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  .....................................................................................A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  M  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  W  P  P  V  P  H  I  A  V 
                    Query_11971  181  CAGTTCTCCCTGAAGATGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGATGGCCCCCCGTACCGCATATAGCAGTG  270
V  97.9% (238/243)  IGHV4-59*01  229  ...............C.....................................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  4    --------------------------------------------------------------------------------..........  13

                                      -------------->                                  
                                       P  A  T  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_11971  271  CCTGCCACGGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  319
D  92.9% (13/14)    IGHD6-19*01  14   G...---------------------------------------------  17
J  97.5% (39/40)    IGHJ4*02     9    ---------............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_22779

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           335     4e-94
IGHD4-17*01                                                                                           21.8    0.042
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTCGGA	TGACTTCGGTGACT	TCCGGGGCAG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATTCGGATGACTTCGGTGACTTCCGGGGCAGCTGGTTCGACCCC	VKDSDDFGDFRGSWFDP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  I  Y  V  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11972  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAATATCTATGTCATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  92.8% (232/250)  IGHV3-64*05  47   ..........................................G..G.....CT.....................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  G  I  S  G  N  G  H  R  T  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11972  91   AATATGTTTCAGGTATCAGTGGTAATGGGCATAGAACATACTATGGAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-64*05  137  ............C...T...A........GG...C........C.C............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  M  F  F  L  Q  M  S  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  D  S  D  D  F  G  D  
                    Query_11972  181  AGAACATGTTCTTTCTTCAAATGAGCAGTCTGAGAGCTGAGGACACGGCTCTGTATTACTGTGTGAAAGATTCGGATGACTTCGGTGACT  270
V  92.8% (232/250)  IGHV3-64*05  227  ......C.C.G.A.G...................................G...................--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  92.9% (13/14)    IGHD4-17*01  1    ----------------------------------------------------------------------------.....A........  14

                                      GT-------------------->                                  
                                      F  R  G  S  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11972  271  TCCGGGGCAGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (47/47)   IGHJ5*02     5    ----------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_92652

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           336     1e-94
IGHD6-19*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGCAGGA	AGTGGCTGG	CCCCGGGGTCAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGCAGGAAGTGGCTGGCCCCGGGGTCAATTTGACTAC	ARGAGSGWPRGQFDY	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  S  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_11973  4    CCCTGAGACTCTCCTGTACTGTCTCCGGTGGATCCGTCAGCAGTAGTAGTTACTATTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGAC  93
V  93.2% (232/249)  IGHV4-61*01  50   .....TCC...A....C........T.....C............G..........C.......................A..........  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  E  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  
                    Query_11973  94   TGGAGTGGATTGAGTATATCTATTACAGGGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCGTATCAGTCGACACGTCCA  183
V  93.2% (232/249)  IGHV4-61*01  140  ............G...............T....G.....................................A.......A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  S  G  W  P  
                    Query_11973  184  AGAACCAGTTCTCCCTGAAACTGAGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGAGCAGGAAGTGGCTGGCCCC  273
V  93.2% (232/249)  IGHV4-61*01  230  ...................G.....C...........................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-19*01  10   -----------------------------------------------------------------------------.........----  18

                                      ---------------->                                
                                      R  G  Q  F  D  Y  W  G  Q  G  I  L  D  T  V  S  S
                    Query_11973  274  GGGGTCAATTTGACTACTGGGGCCAGGGAATCCTGGACACCGTCTCCTC  322
J  95.1% (39/41)    IGHJ4*02     6    --------......................C.....T............  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_273748

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           357     1e-100
IGHD3-3*01                                                                                            21.8    0.041 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGCCTCGTGCCTG	GGAGTGGTTAT	GAAGCCATACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGCCTCGTGCCTGGGAGTGGTTATGAAGCCATACCTGACTAC	AKSLVPGSGYEAIPDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_11974  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTTAGCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-23*01  47   ......................................T..................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  D  T  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11974  91   AATGGGTCTCAGGTATTAGTGGTAGTGGTGGTGACACATACTACGCAGACGCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (238/248)  IGHV3-23*01  137  .G..........C...................AG................T.......................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  F  C  A  K  S  L  V  P  G  S  G  
                    Query_11974  181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTATATTTCTGTGCGAAAAGCCTCGTGCCTGGGAGTGGTT  270
V  96.0% (238/248)  IGHV3-23*01  227  ...A................................C....................A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD3-3*01   15   ---------------------------------------------------------------------------------.........  23

                                      T------------------>                                
                                      Y  E  A  I  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_11974  271  ATGAAGCCATACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  322
D  100.0% (11/11)   IGHD3-3*01   24   ..--------------------------------------------------  25
J  100.0% (39/39)   IGHJ4*02     8    -------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_123999

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           445     2e-127
IGHD3-3*01                                                                                            41.1    8e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACGCCT	CGATTTTTGGAGTGGTTATTGTAC	GAGAATCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTAC	ARYASIFGVVIVRESFDY	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	287	2	0	99.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_11975  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  99.3% (287/289)  IGHV5-51*01  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_11975  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACTAGATACAGCCC  180
V  99.3% (287/289)  IGHV5-51*01  96   ............................................................T.................C...........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11975  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  99.3% (287/289)  IGHV5-51*01  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  Y  A  S  I  F  G  V  V  I  V  R  E  S  F  D  Y  W  G  Q  G  T  L  V  T
                    Query_11975  271  CATGTATTACTGTGCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTACTGGGGCCAGGGAACCCTGGTCAC  360
V  99.3% (287/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  95.8% (23/24)    IGHD3-3*01   7    --------------------------....................A...----------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    ----------------------------------------------------------................................  37

                                                 
                                        V  S  S  
                    Query_11975  361  CGTCTCCTCAG  371
J  100.0% (43/43)   IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_307889

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              58.4    8e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	ACAGCTGTGG	CTAGGCA	GCCAG	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  S  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  E  G  L  
                    Query_11976  1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCAGCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGGAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-23*01  47   ........................C...........C...........................................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  N  P  S  G  K  N  I  Y  N  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_11976  91   AGTGGGTCTCAGCTATTAATCCTAGTGGTAAAAACATATACAACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-23*01  137  ..................G.GG.......GGT.G..C....T................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT---------------------------------------------------->                            
                                      K  K  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  E  Q  L  W  L  G  S  
                    Query_11976  181  AGAAGACACTGTATCTACAAATGAACAGCCTAAGAGCCGAGGACACGGCCGTATACTACTGTGCCAAAGAACAGCTGTGGCTAGGCAGCC  270
V  92.8% (232/250)  IGHV3-23*01  227  ....C..G........G..............G.......................T........G.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (9/10)     IGHD5-18*01  7    ----------------------------------------------------------------------......A...----------  16
J  100.0% (30/30)   IGHJ4*02     19   ---------------------------------------------------------------------------------------...  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_11976  271  AGGGAACCCTGGTCACCGTCTCCTCAG  297
J  100.0% (30/30)   IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_307888

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           315     5e-88
IGHD2-21*02                                                                                           23.8    0.011
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAACTGGAG	GTGGTGGTGACT	TCTTTCGGGACCACGCGA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCAACTGGAGGTGGTGGTGACTTCTTTCGGGACCACGCGAGATGCTTTTGATATC	ARGQLEVVVTSFGTTRDAFDI	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	225	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  V  S  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_11977  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCGTTTCCTATACCATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.4% (225/249)  IGHV3-21*01  47   .........................................AG.AG.....G....A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  T  S  S  T  S  V  L  L  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11977  91   AATGGGTCTCATCCACTTCTAGCACTAGTGTCTTACTAGACTACGCAGACTCAGTGAAGGGCCGCTTCACCATCTCCAGAGACAACGCCA  180
V  90.4% (225/249)  IGHV3-21*01  137  .G.............T.AG...T.G....AGT.ACA..T.........................A.........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  S  L  F  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  Q  L  E  V  V  V  
                    Query_11977  181  AGAACTCACTTTTTCTGCAAATGAACACCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGGCCAACTGGAGGTGGTGGTGA  270
V  90.4% (225/249)  IGHV3-21*01  227  ..........G.A..............G........................G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD2-21*02  9    --------------------------------------------------------------------------------..........  18

                                      DR3-IMGT-------------------------->                                  
                                      T  S  F  G  T  T  R  D  A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_11977  271  CTTCTTTCGGGACCACGCGAGATGCTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  339
D  100.0% (12/12)   IGHD2-21*02  19   ..-------------------------------------------------------------------  20
J  98.0% (48/49)    IGHJ3*02     2    --------------------..............................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_125865

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           355     3e-100
IGHD1-26*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTCCGGAG	GTGGGAGCTACT	CGTGGTCCTTTTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCGGAGGTGGGAGCTACTCGTGGTCCTTTTCCTAC	ARGSGGGSYSWSFSY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11978  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGCTTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-21*01  47   .............................................G.......A...A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  S  S  S  S  Y  M  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11978  91   AGTGGGTCTCATCCATTACTAGTAGTAGTAGTTACATGAACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (238/249)  IGHV3-21*01  137  ..................G..................AT...................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  S  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  G  S  G  G  G  S  Y  
                    Query_11978  181  AGAGCTCCCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTTCTGTGCGAGAGGGTCCGGAGGTGGGAGCTACT  270
V  95.6% (238/249)  IGHV3-21*01  227  ...A...A....A.......................................G....A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD1-26*01  7    ------------------------------------------------------------------------------............  18

                                      ---------------->                                  
                                      S  W  S  F  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11978  271  CGTGGTCCTTTTCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (38/38)   IGHJ4*02     11   -------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_307883

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*02                                                                                            302     3e-84
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*02	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCACA	TTTTCGTTCGCCC	TTGGAATGGTTATTATA	TGAATTAC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCACATTTTCGTTCGCCCTTGGAATGGTTATTATATGAATTACTTCGACCCC	AHIFVRPWNGYYMNYFDP	263	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	45	1	0	97.8
CDR1-IMGT	47	76	30	27	3	0	90
FR2-IMGT	77	127	51	47	4	0	92.2
CDR2-IMGT	128	148	21	18	3	0	85.7
FR3-IMGT	149	262	114	88	26	0	77.2
CDR3-IMGT (germline)	263	269	7	6	1	0	85.7
Total	N/A	N/A	269	231	38	0	85.9


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  S  F  S  G  F  S  L  N  T  S  G  V  G  V  A  W  I  R
                    Query_11979  1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCAGCTTCTCTGGTTTCTCACTCAACACGAGTGGAGTGGGTGTGGCCTGGATCCG  90
V  85.9% (231/269)  IGHV2-5*02   30   ......................................C.........G..........G...T................G.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  R  K  A  L  E  W  L  S  L  I  Y  W  D  D  D  Q  R  Y  S  P  S  L  L  G  R  I  S
                    Query_11979  91   TCAGCCCCCACGAAAGGCCCTGGAGTGGCTTTCACTGATTTACTGGGATGACGATCAGCGCTACAGTCCCTCTCTTTTGGGCAGAATCAG  180
V  85.9% (231/269)  IGHV2-5*02   120  ..........G....................G....C.....T........T...A..........C..A.....GAA.A....GC...C  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  D  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        V  T  K  A  S  S  G  S  Q  V  V  L  T  I  T  S  V  A  P  A  D  T  G  T  Y  Y  C  A  H  I
                    Query_11979  181  CGTCACCAAGGCCTCCTCCGGGTCTCAGGTGGTCCTTACAATTACCAGCGTGGCCCCTGCAGACACAGGCACATACTACTGTGCGCACAT  270
V  85.9% (231/269)  IGHV2-5*02   210  .A.........A.A.....AAAAAC.................G....A.A...A.....TG.......C......T........A....-  298
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H   

                                      ---------------CDR3-IMGT--------------------->                                  
                                        F  V  R  P  W  N  G  Y  Y  M  N  Y  F  D  P  W  G  R  G  T  E  V  T  V  S  S  
                    Query_11979  271  TTTCGTTCGCCCTTGGAATGGTTATTATATGAATTACTTCGACCCCTGGGGCCGGGGAACCGAGGTCACCGTCTCCTCAG  350
D  94.1% (16/17)    IGHD3-3*01   13   ------------.....G...........---------------------------------------------------  29
J  93.0% (40/43)    IGHJ5*02     9    -------------------------------------................A.......CT.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_307882

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            315     5e-88
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCTCTCCTAGAAGTGACTGGGCGAGGG	GGGGGAGT	N/A	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCTCTCCTAGAAGTGACTGGGCGAGGGGGGGGAGTTGGTTCGACCCC	AASPRSDWARGGSWFDP	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  G  I  T  Y  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_11980  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCGGCATTACTTACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.4% (222/243)  IGHV4-4*02   49   .......................................A...G..G.A.........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  A  Y  Y  S  G  S  N  N  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  K  S  K 
                    Query_11980  91   GAGTGGATTGGGGAAGCCTATTATAGTGGGAGCAACAACTACAACCCGTCCCTCAAAAGTCGAGTCGCCATATCAGTGGACAAGTCCAAG  180
V  91.4% (222/243)  IGHV4-4*02   139  ...............AT....C............C.....................G.........A..........A............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  E  F  S  L  R  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  A  S  P  R  S  D  W  A  R 
                    Query_11980  181  AACGAGTTTTCCCTGAGGTTAACGTCTATGACCGCCGCGGACACGGCCGTATATTATTGTGCGGCCTCTCCTAGAAGTGACTGGGCGAGG  270
V  91.4% (222/243)  IGHV4-4*02   229  ...C....C.......A.C.G.GC...G......................G.....C......---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            

                                      -------------------->                                  
                                       G  G  S  W  F  D  P  W  G  Q  G  I  L  V  I  V  S  S  
                    Query_11980  271  GGGGGGAGTTGGTTCGACCCCTGGGGCCAGGGAATCCTGGTCATCGTCTCCTCAG  325
D  100.0% (8/8)     IGHD3-16*01  18   -........----------------------------------------------  25
J  95.7% (44/46)    IGHJ5*02     6    ---------.........................C........C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_307881

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            366     2e-103
IGHD3-3*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGTAGTCAAG	ACGATTTTTGGAGTGGTT	TGTTCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTAGTCAAGACGATTTTTGGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTC	ARDGSQDDFWSGLFHYYYGMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  P  P  G  K  G  L  
                    Query_11981  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGGTATTGGATGAGTTGGGTCCGCCAACCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-7*03   47   ..............................................C...........C...........GG..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_11981  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (242/250)  IGHV3-7*03   137  ........................................................A.................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  V  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  Q  D  D  F  
                    Query_11981  181  AGAACTCAGTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAGAGATGGTAGTCAAGACGATTTTT  270
V  96.8% (242/250)  IGHV3-7*03   227  ........C........C..................................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-3*01   6    ---------------------------------------------------------------------------------.........  14

                                      -CDR3-IMGT--------------------------->                                 
                                      W  S  G  L  F  H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11981  271  GGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  100.0% (18/18)   IGHD3-3*01   15   .........--------------------------------------------------------------  23
J  96.4% (54/56)    IGHJ6*02     7    ---------------.......C..C.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_307880

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            288     5e-80
IGHD4-17*01                                                                                           14.1    8.5  
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGAGGCAGCAGG	CGGTGAC	AGGGCG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGAGGCAGCAGGCGGTGACAGGGCGGCTTTTGATATC	ARDQEAAGGDRAAFDI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	46	5	0	90.2
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	97	17	0	85.1
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	216	32	0	87.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  R  K  P  N  W  W  F  W  V  R  Q  A  P  G  K  G  L 
                    Query_11982  1    ACCCTGTCCCTCACCTGCTCAGTCTCTGGGGGCTCCATCAGAAAACCTAACTGGTGGTTTTGGGTCCGCCAGGCCCCAGGGAAGGGTCTG  90
V  87.1% (216/248)  IGHV4-4*02   49   ..................G.T........T...........C.GTAG..........AG.............C.............G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  K  I  Y  H  S  G  T  T  N  Y  N  P  S  L  E  S  R  V  V  I  S  V  D  K  S  K 
                    Query_11982  91   GAGTGGATTGGGAAAATTTATCATAGTGGGACCACCAATTACAATCCGTCCCTCGAGAGTCGAGTCGTCATTTCAGTGGACAAGTCCAAG  180
V  87.1% (216/248)  IGHV4-4*02   139  ............G....C.............G......C.....C.........A...........AC...A.....A............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  V  F  S  L  R  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  Q  E  A  A  G  G  D 
                    Query_11982  181  AACGTCTTCTCCTTGCGGCTGACCTCTGTGACCGCCGCGGACACAGCCATATATTACTGTGCGAGAGATCAGGAGGCAGCAGGCGGTGAC  270
V  87.1% (216/248)  IGHV4-4*02   229  ...CAG......C..AA.....G.....................G...G.G.................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD4-17*01  7    -----------------------------------------------------------------------------------.......  13

                                      ----------------->                                  
                                       R  A  A  F  D  I  W  G  Q  G  R  M  V  V  V  S  S  
                    Query_11982  271  AGGGCGGCTTTTGATATCTGGGGCCAAGGGAGAATGGTCGTCGTCTCTTCAG  322
J  93.5% (43/46)    IGHJ3*02     5    ------.........................C.......AC...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_307887

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           336     1e-94
IGHD3-3*01                                                                                            10.3    118  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATC	GAGTG	CCCTTCCAATTTG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCGAGTGCCCTTCCAATTTGACGGTATGGACGTC	ARNRVPFQFDGMDV	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11983  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTTCTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.2% (229/243)  IGHV4-59*08  49   .......................................A..AG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  N  G  Y  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_11983  91   TGGATTGGCTATATGTATTACAATGGGTACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGTCCAAGAAC  180
V  94.2% (229/243)  IGHV4-59*08  139  ........G.....C.......G....AG.......................................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       L  F  S  L  M  L  T  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  N  R  V  P  F  Q  F  D  G 
                    Query_11983  181  CTGTTCTCCCTGATGCTGACCTCTGTGACCTCCGCAGACACGGCCGTGTATTACTGTGCGAGAAATCGAGTGCCCTTCCAATTTGACGGT  270
V  94.2% (229/243)  IGHV4-59*08  229  .A...........A.....G..........G................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-3*01   16   -------------------------------------------------------------------.....------------------  20
J  95.7% (45/47)    IGHJ6*02     16   -------------------------------------------------------------------------------------.....  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_11983  271  ATGGACGTCTGGGGCCAAGGGACGACGGTCAGCGTCTCCTCA  312
J  95.7% (45/47)    IGHJ6*02     21   .......................C.......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_307886

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-9*01                                                                                            14.1    8.3  
IGHJ2*01                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTACGC	TTTTGAC	GGCA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTACGCTTTTGACGGCAACTGGTACTTCGATCTC	AREYAFDGNWYFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11984  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGCCATGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ...............................................T...................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  T  T  G  G  S  T  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_11984  91   AGTGGGTTTCAGCTATTACTACTACTGGTGGTAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  .......C..........G.GG..G.............T................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  M  E  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  Y  A  F  D  G  N  
                    Query_11984  181  AGAACACGTTGTCTATGGAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAGAGAGTACGCTTTTGACGGCAACT  270
V  94.0% (235/250)  IGHV3-23*01  227  ........C...A.C..C......................G.........................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-9*01   12   ----------------------------------------------------------------------------.......-------  18
J  100.0% (51/51)   IGHJ2*01     3    ---------------------------------------------------------------------------------------...  5

                                      ------------->                                  
                                      W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11984  271  GGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  318
J  100.0% (51/51)   IGHJ2*01     6    ................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_307885

Length=412
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     2e-109
IGHD3-10*01                                                                                           16.1    2.7   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTC	TCGGGGAG	GGGGTCGTTCGACTCCTCTATAGTCCTATACTTCTCCAATTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCTCGGGGAGGGGGTCGTTCGACTCCTCTATAGTCCTATACTTCTCCAATTAT	ARHVSGRGSFDSSIVLYFSNY	291	353	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	17	7	0	70.8
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	104	10	0	91.2
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	295	271	24	0	91.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  E  D  S  F  N  
                    Query_11985  4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGATCTGAAGACAGCTTTAATA  93
V  91.9% (271/295)  IGHV5-51*01  2    ..G...............................A...................................T....G.T.........CC.  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  F  W  I  A  W  V  R  Q  R  P  G  K  G  L  E  W  M  G  F  I  Y  P  G  D  S  G  T  K  Y  
                    Query_11985  94   ATTTCTGGATCGCCTGGGTGCGCCAGAGGCCCGGGAAAGGCCTGGAGTGGATGGGGTTCATCTATCCTGGTGACTCTGGTACCAAGTACA  183
V  91.9% (271/295)  IGHV5-51*01  92   GC.A........G..............T............................A.....................A.....GA....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  I  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  T  S  L  K  A  S  D  
                    Query_11985  184  GCCCGTCCTTCCAAGGCCAGATCACCATCTCAGCCGACAAGTCCACCAGTACCGCCTACCTGCAGTGGACTAGTCTGAAGGCCTCGGACA  273
V  91.9% (271/295)  IGHV5-51*01  182  ....................G........................T...C...................GC..C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------------CDR3-IMGT-------------------------->          
                                      S  A  M  Y  Y  C  A  R  H  V  S  G  R  G  S  F  D  S  S  I  V  L  Y  F  S  N  Y  W  G  Q  
                    Query_11985  274  GCGCCATGTATTATTGTGCGAGACATGTCTCGGGGAGGGGGTCGTTCGACTCCTCTATAGTCCTATACTTCTCCAATTATTGGGGCCAGG  363
V  91.9% (271/295)  IGHV5-51*01  272  C............C...........-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD3-10*01  14   -----------------------------........-----------------------------------------------------  21
J  100.0% (34/34)   IGHJ4*02     15   --------------------------------------------------------------------------------..........  24

                                                              
                                      G  T  L  V  T  V  S  S  
                    Query_11985  364  GAACCCTGGTCACCGTCTCCTCAG  387
J  100.0% (34/34)   IGHJ4*02     25   ........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40393728


Query= Query_325589

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           330     1e-92
IGHD3-10*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	229	18	0	92.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  A  V  S  S  S  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  
                    Query_11986  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCGCCGTCAGCAGCAGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  92.7% (229/247)  IGHV4-61*01  50   .....TCC...A....................T..........TG...G...........G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_11986  94   TGGAATGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCA  183
V  92.7% (229/247)  IGHV4-61*01  140  ....G................AT........G.G........................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  
                    Query_11986  184  AGAACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGG  273
V  92.7% (229/247)  IGHV4-61*01  230  ..................A......C.........G................G..............-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  93.3% (14/15)    IGHD3-10*01  11   -----------------------------------------------------------------------..........G....----  25

                                      ------------->                                  
                                      G  W  L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11986  274  GCTGGCTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.9% (46/47)    IGHJ5*02     5    -....T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_325582

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            283     1e-78
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GAATGAACCCTGAATT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATGAACCCTGAATTC	ARGMNPEF	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	40	11	0	78.4
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	215	34	0	86.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  R  G  H  W  M  T  W  I  R  H  L  P  D  K  G  L  
                    Query_11987  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTCGTGGCCACTGGATGACTTGGATTCGCCACCTTCCAGATAAGGGGCTGC  90
V  86.3% (215/249)  IGHV3-7*01   47   ....................................C....A..A..T.T.......GC...G.C.....GGC.....GG.........G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  N  I  K  D  D  G  S  E  E  H  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11987  91   AGTGGGTGGCCAATATAAAGGACGATGGAAGTGAAGAGCACTATGGAGACTCTGTGAAGGGCCGATTCACCATCTCCCGAGACAACGCCC  180
V  86.3% (215/249)  IGHV3-7*01   137  .............C......C.A...........GA.AT......TG..............................A...........A  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      Q  N  S  L  F  L  Q  M  N  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  M  N  P  E  F  W  
                    Query_11987  181  AGAACTCTCTGTTTTTGCAGATGAACAACCTGAGAGTCGAAGACACGGCTGTATATTACTGTGCGAGAGGAATGAACCCTGAATTCTGGG  270
V  86.3% (215/249)  IGHV3-7*01   227  .......A....A.C....A.......G........C...G...........G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  94.3% (33/35)    IGHJ4*02     14   -------------------------------------------------------------------------------------.....  18

                                                                    
                                      G  Q  G  T  L  V  I  V  S  S  
                    Query_11987  271  GCCAGGGAACCCTGGTCATCGTCTCGTCAG  300
J  94.3% (33/35)    IGHJ4*02     19   ..................C......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_325580

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           419     2e-119
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	69	2	0	97.2
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	292	280	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  
                    Query_11988  7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACT  96
V  95.9% (280/292)  IGHV5-51*01  5    ..............................A...................................G....................G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  
                    Query_11988  97   ACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCC  186
V  95.9% (280/292)  IGHV5-51*01  95   .........G...........................C....................C...................C...........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  
                    Query_11988  187  CGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCG  276
V  95.9% (280/292)  IGHV5-51*01  185  ........C.....................................C...........G......A........................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------------CDR3-IMGT----------------------->                   
                                      A  I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  
                    Query_11988  277  CCATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGG  366
V  95.9% (280/292)  IGHV5-51*01  275  ....G.................--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  92.9% (13/14)    IGHD1-26*01  4    ------------------------------..........C...----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    -----------------------------------------------.......A...................................  48

                                                    
                                      V  T  V  S  S 
                    Query_11988  367  TCACCGTCTCCTCA  380
J  98.2% (56/57)    IGHJ6*02     49   ..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_325581

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           377     1e-106
IGHD3-10*01                                                                                           14.1    9.4   
IGHJ4*01                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CCCAA	ATTACTTGGGTTC	CCAGCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACACCCAAATTACTTGGGTTCCCAGCCATTTGACTCC	ARHPNYLGSQPFDS	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	266	25	0	91.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  H  S  F  I  G  H
                    Query_11989  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCCGGACACAGTTTTATCGGCCA  90
V  91.4% (266/291)  IGHV5-51*01  6    ....................................C................................T...T....C....C.A..T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  M  I  Y  F  D  D  S  D  T  R  Y  S  P
                    Query_11989  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGAAAAGGCCTGGAGTGGATGGGGATGATATATTTTGACGACTCTGATACAAGATACAGTCC  180
V  91.4% (266/291)  IGHV5-51*01  96   ..............................G.......................C..C...CC..GT...........C........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  V  Y  L  Q  W  S  S  L  R  A  S  D  T  A
                    Query_11989  181  GTCCTTCGAGGGCCAGGTCACCATCTCCGCCGACAAGTCCATCAGTACCGTCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACACTGC  270
V  91.4% (266/291)  IGHV5-51*01  186  .......C.A.................A.................C....C.......................A............C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  F  C  A  R  H  P  N  Y  L  G  S  Q  P  F  D  S  W  G  H  G  T  L  V  T  V  S  S  
                    Query_11989  271  CATGTATTTCTGTGCCAGACACCCAAATTACTTGGGTTCCCAGCCATTTGACTCCTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  359
V  91.4% (266/291)  IGHV5-51*01  276  ........A......G.....--------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                       
D  84.6% (11/13)    IGHD3-10*01  3    --------------------------......AT.....--------------------------------------------------  15
J  95.3% (41/43)    IGHJ4*01     6    ----------------------------------------------.......A.........A.........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_325586

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           343     2e-96
IGHD2-15*01                                                                                           33.4    2e-05
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATGAAA	GATATTGTAGTGAAGGTAGTTGCTAC	CCTACA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTACCCTACATACTTTGACTTC	ARYERYCSEGSCYPTYFDF	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	254	35	0	87.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  K  I  S  C  K  T  S  G  Y  S  F  S  N  Y
                    Query_11990  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAAAAGCCCGGGCAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGTTTCAGCAACTA  90
V  87.9% (254/289)  IGHV5-51*01  6    .....................A..................G.......................GG............C..T.C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  S  G  E  G  L  E  W  M  G  I  I  Y  A  G  D  S  D  I  T  Y  S  P
                    Query_11990  91   TTGGATCGGCTGGGTGCGCCAGATGTCCGGTGAAGGCCTGGAGTGGATGGGAATCATCTATGCTGGCGACTCTGACATTACATATAGTCC  180
V  87.9% (254/289)  IGHV5-51*01  96   C........................C....GA...................G.........C....T........T.CC.G...C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  R  V  T  I  S  V  D  K  A  I  D  T  A  Y  V  Q  W  S  C  L  K  A  S  D  T  A
                    Query_11990  181  GTCCTTTGAGGGCCGGGTCACCATCTCAGTCGACAAGGCCATCGACACCGCCTACGTACAGTGGAGCTGTCTGAAGGCCTCGGACACCGC  270
V  87.9% (254/289)  IGHV5-51*01  186  ......CC.A....A..............C.......T.....AG..........C.G.........A.C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        T  Y  Y  C  A  R  Y  E  R  Y  C  S  E  G  S  C  Y  P  T  Y  F  D  F  W  G  Q  G  T  P  V
                    Query_11990  271  CACATATTACTGTGCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTACCCTACATACTTTGACTTCTGGGGCCAGGGAACCCCGGT  360
V  87.9% (254/289)  IGHV5-51*01  276  ..TG...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  88.5% (23/26)    IGHD2-15*01  3    --------------------------............GT.....C......--------------------------------------  28
J  95.7% (44/46)    IGHJ4*02     3    ----------------------------------------------------------..........A.................T...  34

                                                    
                                        T  V  S  S  
                    Query_11990  361  CACCGTCTCCTCAG  374
J  95.7% (44/46)    IGHJ4*02     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_325587

Length=429
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     7e-119
IGHD3-9*01                                                                                            12.2    40    
IGHJ6*02                                                                                              108     1e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	ACGGGCCCCA	ATTTCGATA	GCACTTCGGAACGCTGGGGCCGACGAAAGAAAATATC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAACGGGCCCCAATTTCGATAGCACTTCGGAACGCTGGGGCCGACGAAAGAAAATATCACTACTACTACAACGGTATGGACGTC	ARQRAPISIALRNAGADERKYHYYYNGMDV	284	373	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  E  S  L  K  I  S  C  K  G  S  G  S  G  F  N  T  Y
                    Query_11991  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATCCGGCTTTAACACGTA  90
V  95.9% (279/291)  IGHV5-51*01  6    ...............................A..........................................A.A......C..GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  D  W  M  G  I  I  Y  V  D  D  S  D  T  T  Y  S  P
                    Query_11991  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGACTGGATGGGGATCATCTATGTTGATGACTCTGATACCACATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G.................................G..................CC..G..............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_11991  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------------------------CDR3-IMGT---------------------------
                                        M  Y  Y  C  A  R  Q  R  A  P  I  S  I  A  L  R  N  A  G  A  D  E  R  K  Y  H  Y  Y  Y  N
                    Query_11991  271  CATGTATTACTGTGCGAGACAACGGGCCCCAATTTCGATAGCACTTCGGAACGCTGGGGCCGACGAAAGAAAATATCACTACTACTACAA  360
V  95.9% (279/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  88.9% (8/9)      IGHD3-9*01   3    -------------------------------...A.....--------------------------------------------------  11
J  98.3% (58/59)    IGHJ6*02     4    -----------------------------------------------------------------------------...........T.  16

                                      ------------>                                 
                                        G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_11991  361  CGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  406
J  98.3% (58/59)    IGHJ6*02     17   ..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 42181992


Query= Query_325584

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD1-26*01                                                                                           10.3    119  
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCGCAGAGAGAGGAAGGCC	TGGGA	C	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCGCAGAGAGAGGAAGGCCTGGGACCTGGTTCGACCCC	ARAAERGRPGTWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	224	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  Y  Y  W  H  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_11992  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGCACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.6% (224/242)  IGHV4-59*08  49   ...................C..................................AG..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  Y  S  G  V  T  D  S  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  S  N 
                    Query_11992  91   TGGATTGGCCACATCTATTACAGTGGGGTCACCGACTCCAACCCCTCCCTCAAGGGTCGAGTCACCATATCAGTAGACACTTCCAGCAAC  180
V  92.6% (224/242)  IGHV4-59*08  139  ........GT.T...............AG....A...A................A.........................G....AG...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  A  E  R  G  R  P  G  T 
                    Query_11992  181  CAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGGGCCGCAGAGAGAGGAAGGCCTGGGACC  270
V  92.6% (224/242)  IGHV4-59*08  229  .............A......C..........................G.....C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  8    -----------------------------------------------------------------------------------.....--  12
J  97.9% (46/47)    IGHJ5*02     5    -----------------------------------------------------------------------------------------.  5

                                      ----------->                                  
                                       W  F  D  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_11992  271  TGGTTCGACCCCTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.9% (46/47)    IGHJ5*02     6    ...................A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_325585

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           399     3e-113
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_11993  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCTTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  94.1% (272/289)  IGHV5-51*03  6    .........................................................C...................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  R  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_11993  91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGAGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  94.1% (272/289)  IGHV5-51*03  96   ........G.......................A................G..................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  R  S  I  T  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_11993  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAGGTCCATCACGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  94.1% (272/289)  IGHV5-51*03  186  ...............G...................A........GC...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S
                    Query_11993  271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTC  360
V  94.1% (272/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  97.9% (47/48)    IGHJ4*02     1    --------------------------------------------...................................A..........  46

                                        
                                        
                    Query_11993  361  AG  362
J  97.9% (47/48)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_179167

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            355     3e-100
IGHD3-16*01                                                                                           12.2    31    
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGGC	GGGGGA	CCTACCGTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGCGGGGGACCTACCGTGTTTGACTAC	ARGGGGPTVFDY	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	109	5	0	95.6
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  S  K  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_11994  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGTAGTAAATGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  96.0% (237/247)  IGHV4-4*02   49   ...............................G..................C.......G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  Y  H  S  G  S  S  N  Y  S  P  S  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_11994  91   GAGTGGATTGGGGATATCTATCATAGTGGGAGCTCCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  96.0% (237/247)  IGHV4-4*02   139  ..............A..................A.........A..........A...................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  G  P  T  V  F 
                    Query_11994  181  AATCAGTTCTCCCTGAAGCTGACATCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCGGCGGGGGACCTACCGTGTTT  270
V  96.0% (237/247)  IGHV4-4*02   229  ..C...................GC...........................................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------------......------------  23
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11994  271  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (43/43)   IGHJ4*02     9    ........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_31403

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            414     5e-118
IGHD3-10*01                                                                                           21.8    0.046 
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	GGATG	TGGTTCGGGGA	CC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGAAAAGATAGGATGTGGTTCGGGGACCACTACTACGGTATTGACGTC	GKDRMWFGDHYYGIDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	293	10	9	1	0	90
Total	N/A	N/A	293	279	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  E  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  D  N  Y
                    Query_11995  1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGGAACAGCCTGGCAGGTCCCTGAGACTCTCGTGTGCAGCCTCTGGATTCACCTTTGATAATTA  90
V  95.2% (279/293)  IGHV3-9*01   6    ..........G.......G..........T...........................C...........................G....  95
                                        Q  L  V  E  S  G  G  G  L  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  S  W  D  G  G  R  I  A  Y  A  D
                    Query_11995  91   TGCCATGCACTGGGTCCGACAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATTAGTTGGGATGGTGGTAGGATAGCCTATGCGGA  180
V  95.2% (279/293)  IGHV3-9*01   96   ..................G.............................................A..A.......C....G.........  185
                                        A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  D  S  L  R  T  E  D  T  A
                    Query_11995  181  CTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTGCAAATGGACAGTCTGAGAACTGAGGACACGGC  270
V  95.2% (279/293)  IGHV3-9*01   186  ................................................................A...........G.............  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        L  Y  Y  C  G  K  D  R  M  W  F  G  D  H  Y  Y  G  I  D  V  W  G  L  G  T  T  V  T  V  S
                    Query_11995  271  CTTGTATTATTGTGGAAAAGATAGGATGTGGTTCGGGGACCACTACTACGGTATTGACGTCTGGGGCCTAGGGACCACGGTCACCGTCTC  360
V  95.2% (279/293)  IGHV3-9*01   276  .........C....C........-------------------------------------------------------------------  298
                                        L  Y  Y  C  A  K  D                                                                     
D  100.0% (11/11)   IGHD3-10*01  10   ----------------------------...........---------------------------------------------------  20
J  94.3% (50/53)    IGHJ6*02     10   -----------------------------------------.............G.............A.....................  58

                                          
                                        S 
                    Query_11995  361  GTCA  364
J  94.3% (50/53)    IGHJ6*02     59   C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_225999

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_11996  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_11996  91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_11996  181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_11996  271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_46424

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           319     2e-89
IGHD5-12*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	T	TGGTTACGAT	CGATTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTTGGTTACGATCGATTCCTTGACAAC	ARVGYDRFLDN	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  N  D  G  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  R 
                    Query_11997  1    ACCCTGTCCCTCACCTGCACTGTCTCGGGTGGCTCCGTCAACGATGGTAATTATTACTGGAGCTGGATCCGACAGCCCCCAGGGAAGAGA  90
V  90.8% (227/250)  IGHV4-61*01  49   ..........................T.............G.AG.....G...C.................G...............G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  F  I  Y  Y  T  G  S  T  T  D  N  P  S  L  K  S  R  V  T  M  S  V  D  T  P 
                    Query_11997  91   CTGGAGTGGATGGGGTTTATCTATTACACTGGGAGCACCACCGACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGCCC  180
V  90.8% (227/250)  IGHV4-61*01  139  ...........T....A...........G...........A.T...............................A.....A......T..  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  R  L  W  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  V  G  Y  D  R  F  L 
                    Query_11997  181  AAGAACCAGTTCTCCCTGCGGCTATGGTCTGTGACCTCTGCGGACACGGCCGTGTATTACTGTGCCAGAGTTGGTTACGATCGATTCCTT  270
V  90.8% (227/250)  IGHV4-61*01  229  ..................AA...GA.C.........G............................G....--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD5-12*01  11   -----------------------------------------------------------------------...C......---------  20
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_11997  271  GACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  97.6% (41/42)    IGHJ4*02     9    ...T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_46425

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GTTCTCC	ATTGTAGTAGTTCCAG	TCCCGGATGAAA	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGTTCTCCATTGTAGTAGTTCCAGTCCCGGATGAAAACTCCTACGGAATGGACGTC	AKEFSIVVVPVPDENSYGMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11998  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTTACCACCCATGCCATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-23*01  47   .........................C................G..G.T...............................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  V  T  G  T  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_11998  91   AGTGGGTCGCAAGCGTTACTGGTACTGGAGGCAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACCCCA  180
V  90.8% (227/250)  IGHV3-23*01  137  ........T..GCTA...G.....G...T..T.....................................................TT...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  I  L  F  L  Q  M  N  S  P  R  A  E  D  T  A  V  Y  Y  C  A  K  E  F  S  I  V  V  V  
                    Query_11998  181  AGAACATCCTGTTTCTACAGATGAACAGCCCGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAAGAGTTCTCCATTGTAGTAGTTC  270
V  90.8% (227/250)  IGHV3-23*01  227  ......CG....A...G..A..........T.....................A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD2-2*01   6    -----------------------------------------------------------------------------...........A.  18

                                      DR3-IMGT-------------------------->                                 
                                      P  V  P  D  E  N  S  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  A  S 
                    Query_11998  271  CAGTCCCGGATGAAAACTCCTACGGAATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCGCCTCA  338
D  93.8% (15/16)    IGHD2-2*01   19   ...-----------------------------------------------------------------  21
J  92.5% (49/53)    IGHJ6*02     10   ---------------...A......T.................A..................T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_214729

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            339     2e-95
IGHD4-17*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAC	CTACGGTGACTAC	CTGGCAGGCCCCTGTAAGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACCTACGGTGACTACCTGGCAGGCCCCTGTAAGCTTGACTAC	ARTYGDYLAGPCKLDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  T  F  R  N  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_11999  1    GGTCCCTGAGACTCTCCTGTGTAGGTTCTGGATTCACCTTTAGAAATTTTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  93.9% (232/247)  IGHV3-7*03   47   .....................C..CC.................T.GC.A....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  D  K  D  G  S  E  I  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_11999  91   AGTGGGTGGCCAACATAGACAAAGATGGAAGTGAGATATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.9% (232/247)  IGHV3-7*03   137  .................A.GC...............A.....................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  S  L  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  T  Y  G  D  Y  L  A  
                    Query_11999  181  GGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTGTATTACTGTGCGAGGACCTACGGTGACTACCTGGCAG  270
V  93.9% (232/247)  IGHV3-7*03   227  A...........A...........................G..........................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (13/13)   IGHD4-17*01  4    ----------------------------------------------------------------------.............-------  16

                                      T------------------>                                  
                                      G  P  C  K  L  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_11999  271  GCCCCTGTAAGCTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  324
J  97.6% (41/42)    IGHJ4*02     7    ------------....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_214728

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     9e-100
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12000  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.2% (238/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_12000  91   CTCGAGTGGATTGGACACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  95.2% (238/250)  IGHV4-31*03  139  ..G...........GT..................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G 
                    Query_12000  181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  95.2% (238/250)  IGHV4-31*03  229  .........................G................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12000  271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_214725

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           322     2e-90
IGHD2-8*02                                                                                            12.2    30   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTGGGCCGTTGGCC	TACTGG	GTCT	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  V  S  T  N  H  M  N  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_12001  2    CCCTGTCCCTCACCTGCGCAGCCTCTGGATTCACCGTCAGTACCAACCACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  91
V  92.2% (225/244)  IGHV3-53*01  50   .....AGA...T....T...........G.............G....T......G...................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  V  S  I  I  F  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  K  N  
                    Query_12001  92   GGGTCTCAATTATTTTTAGTGGTGGAAGTACATACTACGCAGACTCCGTGAAGGGCCGATTCTCCATCTCCAGAGACAATTCCAAAAACA  181
V  92.2% (225/244)  IGHV3-53*01  140  ........G......A...C.....T..C.................................A......................G....  229
                                      W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  

                                      MGT---------------------------------------------------->                                  
                                      T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  M  Y  Y  C  A  R  D  W  A  V  G  L  L  G  L  
                    Query_12001  182  CACTATATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATGTATTACTGTGCGAGAGATTGGGCCGTTGGCCTACTGGGTCTGG  271
V  92.2% (225/244)  IGHV3-53*01  230  .G..G.......................................G...................--------------------------  293
                                      T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD2-8*02   10   ------------------------------------------------------------------------------......------  15
J  100.0% (32/32)   IGHJ4*02     17   ----------------------------------------------------------------------------------------..  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_12001  272  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (32/32)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_214724

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           402     3e-114
IGHD7-27*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGTCCTTTTA	CTAACTGGGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGTCCTTTTACTAACTGGGGTTGACTTT	AVLLLTGVDF	290	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	73	1	0	98.6
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	291	2	2	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  
                    Query_12002  3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACAGCTTTACCA  92
V  94.5% (273/289)  IGHV5-51*03  2    .................................................................A........................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  F  I  G  W  V  R  Q  R  P  G  E  G  L  E  W  M  G  L  I  Y  P  G  D  P  D  T  R  Y  
                    Query_12002  93   ACTACTTCATCGGCTGGGTGCGCCAGAGGCCCGGGGAAGGCCTGGAGTGGATGGGGCTCATTTATCCTGGTGACCCTGATACCAGGTACA  182
V  94.5% (273/289)  IGHV5-51*03  92   G.....GG...................T.......A....................A....C............T..........A....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  S  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_12002  183  ACTCGTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  94.5% (273/289)  IGHV5-51*03  182  G.C................G............................G..........C..............................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------CDR3-IMGT--------->                                  
                                      T  A  I  Y  Y  C  A  V  L  L  L  T  G  V  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12002  273  CCGCCATTTATTACTGTGCAGTCCTTTTACTAACTGGGGTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  94.5% (273/289)  IGHV5-51*03  272  .......G...........--------------------------------------------------------------  290
                                      T  A  M  Y  Y  C  A                                                              
D  100.0% (10/10)   IGHD7-27*01  1    -----------------------------..........------------------------------------------  10
J  95.2% (40/42)    IGHJ4*02     7    ---------------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_214727

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            420     7e-120
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	274	5	0	98.2


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_12003  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  98.2% (274/279)  IGHV6-1*01   26   ...........................................................G......G....AG.................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_12003  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.2% (274/279)  IGHV6-1*01   116  ..........................................................................................  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_12003  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.2% (274/279)  IGHV6-1*01   206  ..............A...........................................................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------CDR3-IMGT--------->                                  
                                      C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12003  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  98.2% (274/279)  IGHV6-1*01   296  .........---------------------------------------------------------  304
                                      C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02     4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_214726

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           318     6e-89
IGHD2-8*01                                                                                            19.9    0.16 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGAGGGCA	ATATTATACTTCTGATGTATGC	CCCGCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCGGAGGGCAATATTATACTTCTGATGTATGCCCCGCCTGACTTC	ARAEGNIILLMYAPPDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  R  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12004  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCGTTCAGTAGATACACCATGAACTGGGTCCGCCAGGCTCCTGGGAAGGGCCTGG  90
V  90.8% (226/249)  IGHV3-21*01  47   ...................................A.C........C..T.G........................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  D  S  N  T  I  Y  Y  T  D  S  V  K  G  R  F  S  I  S  R  D  N  A  
                    Query_12004  91   AGTGGGTCTCATCTATTAGTGGCGATAGTAATACCATATACTACACAGACTCGGTGAAGGGCCGATTCAGCATCTCCAGAGACAACGCCA  180
V  90.8% (226/249)  IGHV3-21*01  137  .............C......A.TAG.....G.TA..........G.......A................C....................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  F  L  Q  M  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  E  G  N  I  I  L  
                    Query_12004  181  AGAACTCACTGTTTCTTCAAATGCACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGCGAGCGGAGGGCAATATTATACTTC  270
V  90.8% (226/249)  IGHV3-21*01  227  ............A...G......A............................G............A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  81.8% (18/22)    IGHD2-8*01   4    ------------------------------------------------------------------------------.....G....AA  15

                                      GT-------------------->                                  
                                      L  M  Y  A  P  P  D  F  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_12004  271  TGATGTATGCCCCGCCTGACTTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  327
D  81.8% (18/22)    IGHD2-8*01   16   ..G.......-----------------------------------------------  25
J  95.1% (39/41)    IGHJ4*02     8    ----------------.....A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_214721

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           344     7e-97
IGHD3-9*01                                                                                            44.9    5e-09
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCTGT	GGTGGCA	ATTACGATATTTTGGCTGGTTATTAT	TCTGGGGGCC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTGGCAATTACGATATTTTGGCTGGTTATTATTCTGGGGGCCACTTCTATGGTGTGAACGTC	GGNYDILAGYYSGGHFYGVNV	249	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	107	7	0	93.9
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  G  S  G  F  T  F  G  E  Y  A  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_12005  1    GGTCCCTGAGACTCTCCTGTACAGGTTCTGGATTCACCTTTGGGGAATATGCTTTGACCTGGGTCCGCCAGGCTCCTGGGAAGGGGCTGG  90
V  94.4% (234/248)  IGHV3-49*04  47   ........................C..................T..T......A...G..................A.............  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  V  Y  G  G  T  T  E  Y  A  A  S  V  N  G  R  F  T  I  S  R  D  
                    Query_12005  91   AGTGGGTAGGTTTCATTAGAAGCAAAGTTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAATGGCAGATTCACCATCTCACGAGATG  180
V  94.4% (234/248)  IGHV3-49*04  137  ...........................C....................................A..................A......  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  E  S  I  A  Y  L  Q  M  N  S  L  T  I  E  D  T  G  V  Y  F  C  G  G  N  Y  D  I  L  
                    Query_12005  181  ATTCCGAAAGCATCGCCTATCTGCAAATGAACAGCCTGACAATCGAGGACACAGGCGTGTATTTCTGTGGTGGCAATTACGATATTTTGG  270
V  94.4% (234/248)  IGHV3-49*04  227  .....A.................................A..C...........C........A....----------------------  294
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  96.2% (25/26)    IGHD3-9*01   3    ---------------------------------------------------------------------------..............A  17

                                      -----CDR3-IMGT-------------------------->                              
                                      A  G  Y  Y  S  G  G  H  F  Y  G  V  N  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_12005  271  CTGGTTATTATTCTGGGGGCCACTTCTATGGTGTGAACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  341
D  96.2% (25/26)    IGHD3-9*01   18   ...........------------------------------------------------------------  28
J  92.0% (46/50)    IGHJ6*02     10   ---------------------...A...C...A..G...................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_214720

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           299     2e-83
IGHD3-10*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCGGACGAATA	ACTATGGTCCGGGGAG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCGGACGAATAACTATGGTCCGGGGAGCCCCTTTGACGAC	ARHRTNNYGPGSPFDD	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	30	19	5	6	63.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	251	223	22	6	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N        H  F  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_12006  1    ACCCTGTCCCTCACCTGCACTGTCTCAGGTGCCTCCATCAA------TCATTTCTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGG  84
V  88.8% (223/251)  IGHV4-39*01  49   ..........................T....G........GCAGTAG.AG..A.......G.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  H  S  G  S  T  Q  Y  S  P  S  L  Q  S  R  V  T  I  F  V  D  T  S 
                    Query_12006  85   CTGGAGTGGATAGGCAGTATTTATCATAGTGGGAGCACCCAGTACAGTCCGTCCCTCCAGAGCCGAGTCACCATATTCGTGGACACGTCA  174
V  88.8% (223/251)  IGHV4-39*01  139  ...........T..G.....C...T..............T.C....AC.........A....T.............C...A........C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       N  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  H  R  T  N  N  Y  G 
                    Query_12006  175  AACAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACGCGGCTGTGTATTACTGTGCGAGACATCGGACGAATAACTATGGT  264
V  88.8% (223/251)  IGHV4-39*01  229  ..G..........................................A.........................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  93.8% (15/16)    IGHD3-10*01  6    ----------------------------------------------------------------------------------........  13

                                      GT------------------>                                  
                                       P  G  S  P  F  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12006  265  CCGGGGAGCCCCTTTGACGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
D  93.8% (15/16)    IGHD3-10*01  14   T.......-----------------------------------------------  21
J  97.7% (43/44)    IGHJ4*02     5    -----------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_214723

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           319     2e-89
IGHD3-9*01                                                                                            14.1    8.5  
IGHJ3*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-9*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAGAAGGGAGC	CTGGTTA	ATAGGAA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGAGATAAGAAGGGAGCCTGGTTAATAGGAAATGCTTTTGATATC	SRDKKGAWLIGNAFDI	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  V  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12007  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTAGTTATGTTATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-21*01  47   .....................................C........C...AGC.....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  T  S  S  S  D  I  H  H  A  D  A  V  N  G  R  F  T  I  S  R  H  N  A  
                    Query_12007  91   AGTGGGTGTCATCTATTAGTACCAGTAGTAGCGACATACACCACGCAGACGCAGTGAATGGCCGATTCACCATCTCCAGACACAACGCCA  180
V  90.8% (227/250)  IGHV3-21*01  137  .......C.....C.......GT........TT.....T..T........T.......G.....................G.........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  I  Y  Y  C  S  R  D  K  K  G  A  W  L  
                    Query_12007  181  AGAACTCACTGTATCTGGAAATGAACAGCCTGAGAGTCGAGGACACGGCTATATATTATTGTTCGAGAGATAAGAAGGGAGCCTGGTTAA  270
V  90.8% (227/250)  IGHV3-21*01  227  .................C..................C.............G.G.....C...G.......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-9*01   18   ----------------------------------------------------------------------------------.......-  24

                                      T------------------>                                  
                                      I  G  N  A  F  D  I  W  G  Q  G  T  M  V  S  V  S  S  
                    Query_12007  271  TAGGAAATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCTCCGTCTCTTCAG  324
J  97.9% (47/48)    IGHJ3*02     3    ------...................................A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_214722

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           400     9e-114
IGHD3-3*01                                                                                            18.0    0.66  
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCCCGCGTCCCCTATA	TTTTGGAATGGCTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCCGCGTCCCCTATATTTTGGAATGGCTATTACTTTGGCTAC	ARGPASPIFWNGYYFGY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  L  K  V  S  C  K  A  S  G  G  T  F  D  S  H
                    Query_12008  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGTTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCGACAGCCA  90
V  94.1% (273/290)  IGHV1-69*01  6    ..............................................G...................................AG....T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  L  R  Q  A  P  A  Q  G  P  E  W  M  G  G  I  T  P  V  F  G  T  T  N  Y  A  Q
                    Query_12008  91   TGCTATCAGCTGGCTACGACAGGCCCCTGCACAAGGGCCTGAGTGGATGGGAGGGATCACCCCTGTCTTTGGTACAACAAACTACGCACA  180
V  94.1% (273/290)  IGHV1-69*01  96   .............G.G.............G........T....................T....A...........G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  G  S  T  A  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_12008  181  GAGGTTCCAGGGCAGAGTCACGATTACCGCGGACGGGTCCACGGCCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  94.1% (273/290)  IGHV1-69*01  186  ..A................................AA......AG.............................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  G  P  A  S  P  I  F  W  N  G  Y  Y  F  G  Y  G  G  Q  G  T  L  V  T  V
                    Query_12008  271  CGTCTATTACTGTGCGAGAGGCCCCGCGTCCCCTATATTTTGGAATGGCTATTACTTTGGCTACGGGGGCCAGGGAACCCTGGTCACCGT  360
V  94.1% (273/290)  IGHV1-69*01  276  ...G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  86.7% (13/15)    IGHD3-3*01   11   -------------------------------------.......G...T...--------------------------------------  25
J  95.7% (44/46)    IGHJ4*02     3    ----------------------------------------------------.......A....T.........................  40

                                              
                                        S  S  
                    Query_12008  361  CTCCTCAG  368
J  95.7% (44/46)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_279899

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           449     3e-128
IGHD6-6*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	GTATAGCAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTATAGCAGCTCGTCCTTGGTCTGACTAC	ARGIAARPWSDY	292	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	73	1	0	98.6
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	114	0	0	100
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	290	3	0	99


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_12009  5    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  94
V  99.0% (290/293)  IGHV5-51*03  2    ......................................................A...................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  F  W  L  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_12009  95   GCTTCTGGCTCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  184
V  99.0% (290/293)  IGHV5-51*03  92   ...A....A.................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_12009  185  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  99.0% (290/293)  IGHV5-51*03  182  ..........................................................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  M  Y  Y  C  A  R  G  I  A  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12009  275  CCGCCATGTATTACTGTGCGAGAGGTATAGCAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  361
V  99.0% (290/293)  IGHV5-51*03  272  .......................----------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                 
D  100.0% (16/16)   IGHD6-6*01   3    ------------------------................-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_152249

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            378     3e-107
IGHD1-26*01                                                                                           12.2    35    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y
                    Query_12010  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACCACTTA  90
V  91.7% (266/290)  IGHV1-8*01   6    ..................G...............................................T........C..........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F  A  Q
                    Query_12010  91   TGATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTTGCACA  180
V  91.7% (266/290)  IGHV1-8*01   96   .................................A..G..............A..............C.G...T..........A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D  T  A
                    Query_12010  181  GAGATTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGACACGGC  270
V  91.7% (266/290)  IGHV1-8*01   186  ..AG...C............................C.....A.................GC............G..C..AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_12010  271  CATATATTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  352
V  91.7% (266/290)  IGHV1-8*01   276  .G.G................--------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   -----------------------------...G.....--------------------------------------------  18
J  100.0% (40/40)   IGHJ5*02     11   ------------------------------------------........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_152248

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           360     1e-101
IGHD3-16*02                                                                                           35.3    4e-06 
IGHJ5*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGTGACC	ATGATGACGTTTGGGGGATTTGTCGTT	N/A	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGTGACCATGATGACGTTTGGGGGATTTGTCGTTCC	ARVGDHDDVWGICRS	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  I  Y  Y  W  S  W  I  R  Q  P  P  G  K  R 
                    Query_12011  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTATTTACTACTGGAGCTGGATCCGACAGCCCCCAGGGAAGAGA  90
V  96.0% (240/250)  IGHV4-61*01  49   .................................................G.....................G...............G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  M  Y  Y  S  G  S  P  K  Y  N  P  S  L  K  S  R  A  T  I  S  L  H  T  S 
                    Query_12011  91   CTGGAGTGGATTGGGTATATGTATTACAGTGGGAGCCCCAAGTACAACCCCTCCCTCAAGAGTCGAGCCACCATATCATTACACACGTCC  180
V  96.0% (240/250)  IGHV4-61*01  139  ....................C...............A....C.........................T..........G..G........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  V  G  D  H  D  D  V 
                    Query_12011  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGAGCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTAGGTGACCATGATGACGTT  270
V  96.0% (240/250)  IGHV4-61*01  229  ..................................C...................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (24/27)    IGHD3-16*02  6    -------------------------------------------------------------------------------.....T.....  16

                                      ----------------->                                  
                                       W  G  I  C  R  S  W  G  P  G  T  L  V  T  V  S  S  
                    Query_12011  271  TGGGGGATTTGTCGTTCCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  322
D  88.9% (24/27)    IGHD3-16*02  17   .......G..A.....------------------------------------  32
J  97.2% (35/36)    IGHJ5*02     16   ----------------.........A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_196049

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            363     1e-102
IGHD2-15*01                                                                                           10.3    119   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	ACGCCCAA	AGGAT	GACTTCAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGAAAAGATAACGCCCAAAGGATGACTTCAATTGACTCC	GKDNAQRMTSIDS	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	252	10	9	1	0	90
Total	N/A	N/A	252	242	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12012  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCCGGGAAGGGCCTGG  90
V  96.0% (242/252)  IGHV3-9*01   47   ............................................................................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  S  W  N  S  G  T  I  G  Y  A  D  S  V  K  G  R  F  N  I  S  R  D  N  A  
                    Query_12012  91   AATGGGTCGCAGGTATTAGTTGGAATAGTGGCACCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCAATATCTCCAGAGACAACGCCA  180
V  96.0% (242/252)  IGHV3-9*01   137  .G......T......................T.G...................................CC...................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  G  K  D  N  A  Q  R  M  T  
                    Query_12012  181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTATATTACTGTGGAAAAGATAACGCCCAAAGGATGACTT  270
V  96.0% (242/252)  IGHV3-9*01   227  ..........G.........................................G..........C........------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (5/5)     IGHD2-15*01  1    --------------------------------------------------------------------------------.....-----  5

                                      ---------->                                  
                                      S  I  D  S  W  G  Q  G  T  L  V  P  V  P  S  
                    Query_12012  271  CAATTGACTCCTGGGGCCAGGGAACCCTGGTCCCCGTCCCCTCAG  315
J  92.9% (39/42)    IGHJ4*02     7    ---......A......................A.....T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_196048

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            420     7e-120
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGAAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGAAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	274	5	0	98.2


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_12013  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  98.2% (274/279)  IGHV6-1*01   26   ...........................................................G......G....AG.................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_12013  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.2% (274/279)  IGHV6-1*01   116  ..........................................................................................  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_12013  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.2% (274/279)  IGHV6-1*01   206  ..............A...........................................................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------CDR3-IMGT--------->                                  
                                      C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12013  271  GTGCAAGAGGTCTGCGAAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  98.2% (274/279)  IGHV6-1*01   296  .........---------------------------------------------------------  304
                                      C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02     4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_196047

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           397     8e-113
IGHD1-26*01                                                                                           18.0    0.68  
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCCCGGCAGG	GTGGGATCTACT	TG	ACGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTC	ARHGPAGWDLLDAMDV	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	69	2	0	97.2
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	103	11	0	90.4
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	292	273	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  N  F  N  S  
                    Query_12014  7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGTTCTGGATACAACTTTAACAGTA  96
V  93.5% (273/292)  IGHV5-51*01  5    .....................................C.............A..........................G.....C...CT  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      N  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  
                    Query_12014  97   ACTGGATCGGATGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACCAGATATAGGC  186
V  93.5% (273/292)  IGHV5-51*01  95   ..........C..................................................T.......................C..C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  H  V  T  I  T  A  D  K  S  T  T  T  A  Y  L  R  W  S  G  L  K  A  S  D  T  
                    Query_12014  187  CGTCCTTCCAAGGCCACGTCACCATTACAGCCGACAAGTCCACCACCACCGCCTACCTGCGGTGGAGCGGCCTGAAGGCCTCGGACACCG  276
V  93.5% (273/292)  IGHV5-51*01  185  ................G........CT...............T..G..............A.......A.....................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-------------------CDR3-IMGT------------------>                            
                                      A  T  Y  Y  C  A  R  H  G  P  A  G  W  D  L  L  D  A  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_12014  277  CCACTTATTACTGTGCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCT  366
V  93.5% (273/292)  IGHV5-51*01  275  ...TG.................--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD1-26*01  7    ----------------------------------......G.....--------------------------------------------  18
J  97.9% (46/47)    IGHJ6*02     16   ------------------------------------------------...G......................................  57

                                           
                                      S  S 
                    Query_12014  367  CCTCA  371
J  97.9% (46/47)    IGHJ6*02     58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_152244

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           318     6e-89
IGHJ6*02                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	N/A	N/A	TAAACTTCCGCCCGGATCCTCCCTCCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAACTTCCGCCCGGATCCTCCCTCCCACTACTACTACGGTATGGACGTC	VNFRPDPPSHYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  G  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_12015  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCCATGGCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.8% (223/243)  IGHV3-23*01  47   ...........................................C...T...C.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  A  T  G  G  R  K  F  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_12015  91   AGTGGGTCTCGAGTATAAGCGCCACTGGTGGCAGAAAGTTCTACGCAGACTCCGTGAAGGGCCGGCTCACCATCTCCAGAGACAATTCCA  180
V  91.8% (223/243)  IGHV3-23*01  137  ..........AGC...T..T.GT.G......T..C.CA.A.........................T........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  H  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  N  F  R  P  D  P  P  S  
                    Query_12015  181  AGAACACGCTGCATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGTAAACTTCCGCCCGGATCCTCCCTCCC  270
V  91.8% (223/243)  IGHV3-23*01  227  ...........T............................G......................---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             

                                      GT-------------------->                              
                                      H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_12015  271  ACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  323
J  100.0% (53/53)   IGHJ6*02     7    .....................................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_196044

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD7-27*01                                                                                           12.2    36    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGGCCAACCGCCTGGGCGTTAAC	ACTGGG	AC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGCCAACCGCCTGGGCGTTAACACTGGGACCTACTTTGACTCC	ARRANRLGVNTGTYFDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  G  S  G  D  T  F  P  G  Y
                    Query_12016  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGAGACACCTTTCCCGGCTA  90
V  94.5% (274/290)  IGHV5-51*01  6    .............................A...........................................T...G....A..A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  F  P  G  D  S  D  T  K  Y  S  P
                    Query_12016  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAGGGCCTGGAGTGGATGGGGTTCATCTTTCCTGGTGACTCTGATACCAAATACAGCCC  180
V  94.5% (274/290)  IGHV5-51*01  96   .................................A..................A......A....................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  Q  G  Q  V  T  F  S  A  D  K  S  I  G  T  A  Y  L  Q  W  S  R  L  K  A  S  D  P  A
                    Query_12016  181  GGCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCGGCACCGCCTACCTGCAGTGGAGTAGGTTGAAGGCCTCGGACCCCGC  270
V  94.5% (274/290)  IGHV5-51*01  186  .T....................A....................A......................C..CC..............A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  R  A  N  R  L  G  V  N  T  G  T  Y  F  D  S  W  G  Q  G  T  L  V  S  V
                    Query_12016  271  CATGTATTACTGTGCGAGACGGGCCAACCGCCTGGGCGTTAACACTGGGACCTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCTCCGT  360
V  94.5% (274/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD7-27*01  4    -------------------------------------------......-----------------------------------------  9
J  95.7% (45/47)    IGHJ4*02     2    ---------------------------------------------------...........A......................A....  40

                                              
                                        S  S  
                    Query_12016  361  CTCCTCAG  368
J  95.7% (45/47)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_196043

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD1-26*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CAAATC	AGTGGGACCTAC	CATA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACAAATCAGTGGGACCTACCATATTGACCAC	AKQISGTYHIDH	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12017  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTATGCCATGAGTTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  92.3% (229/248)  IGHV3-23*01  47   ...........................................C..C...........C.................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  Y  T  G  G  S  I  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12017  91   AGTGGGTCTCATCTATTACTTATACTGGTGGTAGTATATACTACGCAGAGTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.3% (229/248)  IGHV3-23*01  137  ...........G......G.GG..G.........C.C............C........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      N  N  T  L  Y  L  H  M  D  S  L  R  V  E  D  T  A  V  Y  F  C  A  K  Q  I  S  G  T  Y  H  
                    Query_12017  181  ACAACACGCTGTATCTGCACATGGACAGCCTGAGAGTCGAGGACACGGCCGTGTACTTCTGTGCGAAACAAATCAGTGGGACCTACCATA  270
V  92.3% (229/248)  IGHV3-23*01  227  .G.................A...A............C...............A..T.A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  91.7% (11/12)    IGHD1-26*01  6    --------------------------------------------------------------------------.......G....----  17

                                      ------->                                  
                                      I  D  H  W  G  Q  G  N  L  V  T  V  S  S  
                    Query_12017  271  TTGACCACTGGGGCCAGGGAAACCTGGTCACCGTCTCCTCAG  312
J  95.2% (40/42)    IGHJ4*02     7    .....T...............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_152240

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            357     1e-100
IGHD6-13*01                                                                                           21.8    0.040 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCGAGGG	GCAGCAGTTGGTAC	CATT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCGAGGGGCAGCAGTTGGTACCATTCTACGTTGACTCC	ARLEGQQLVPFYVDS	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	237	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12018  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGATCCATTAGTAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  96.3% (237/246)  IGHV4-4*02   49   ................................C.....C..C................................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_12018  91   GAGTGGATTGGTGAAATCCATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCTAAG  180
V  96.3% (237/246)  IGHV4-4*02   139  ...........G......T...................................................................C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  E  G  Q  Q  L  V  P 
                    Query_12018  181  AACCACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACTCGAGGGGCAGCAGTTGGTACCA  270
V  96.3% (237/246)  IGHV4-4*02   229  .....G...........G....G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  92.9% (13/14)    IGHD6-13*01  8    --------------------------------------------------------------------------.......C......--  21

                                      -------------->                                  
                                       F  Y  V  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12018  271  TTCTACGTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  95.7% (45/47)    IGHJ4*02     2    --....T......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_152243

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12019  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ........................................G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_12019  91   TGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ........G...A..T...............................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y 
                    Query_12019  181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............C....C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12019  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_152242

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12020  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12020  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_12020  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12020  271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_223851

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           347     7e-98
IGHD3-16*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAATC	TTGGGGGAG	CCGACCAGA	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAATCTTGGGGGAGCCGACCAGATTGGCTAC	ARVNLGGADQIGY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  H  Y  W  S  W  M  R  Q  P  P  G  K  G 
                    Query_12021  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGGTAGTCACTACTGGAGCTGGATGCGGCAGCCCCCAGGGAAGGGA  90
V  94.4% (236/250)  IGHV4-61*01  49   .........................................C.........T................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  R  G  S  P  N  Y  E  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_12021  91   CTGGAGTGGATTGGGAATATCTATTATAGGGGGAGCCCCAACTACGAACCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCC  180
V  94.4% (236/250)  IGHV4-61*01  139  ...............T..........C..T......A........A.C..............................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  N  S  L  T  A  A  D  T  A  V  Y  F  C  A  R  V  N  L  G  G  A  D 
                    Query_12021  181  AAGAACCAGTTCTCCCTGAAACTGAACTCTTTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGTTAATCTTGGGGGAGCCGAC  270
V  94.4% (236/250)  IGHV4-61*01  229  ....................G....G....G...........................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  16   ----------------------------------------------------------------------------.........-----  24

                                      ----------->                                  
                                       Q  I  G  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_12021  271  CAGATTGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  316
J  95.2% (40/42)    IGHJ4*02     7    ----...A..................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_223850

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           316     2e-88
IGHD6-25*01                                                                                           18.0    0.54 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAG	ATAGCAGCG	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCCAGATAGCAGCGCCCTTTGATTAC	TRGQIAAPFDY	230	262	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	23	1	0	95.8
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	21	3	0	87.5
FR3-IMGT	116	229	114	108	6	0	94.7
CDR3-IMGT (germline)	230	236	7	6	1	0	85.7
Total	N/A	N/A	224	213	11	0	95.1


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  S  D
                    Query_12022  13   GTCTGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATTTGGTCTGA  102
V  95.1% (213/224)  IGHV3-33*01  72   ....................G............................................................A....A...  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  N  N  K  Y  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  G
                    Query_12022  103  TGGAAATAATAAATATTATGCAGCCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCAAGAACACGCTGTATCTGCAAATGGG  192
V  95.1% (213/224)  IGHV3-33*01  162  .....G.........C.......A....................................T...........................AA  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------CDR3-IMGT----------->                    
                                        S  L  T  A  E  D  T  A  V  Y  Y  C  T  R  G  Q  I  A  A  P  F  D  Y  W  G  Q  G  T  Q  V
                    Query_12022  193  CAGCCTGACAGCCGAGGACACGGCTGTGTATTACTGTACGAGAGGCCAGATAGCAGCGCCCTTTGATTACTGGGGCCAGGGAACCCAGGT  282
V  95.1% (213/224)  IGHV3-33*01  252  ........G............................G......----------------------------------------------  295
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (9/9)     IGHD6-25*01  5    -------------------------------------------------.........--------------------------------  13
J  95.5% (42/44)    IGHJ4*02     5    ------------------------------------------------------------......C...................T...  34

                                                    
                                        T  V  S  S  
                    Query_12022  283  CACCGTCTCCTCAG  296
J  95.5% (42/44)    IGHJ4*02     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_223854

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           271     7e-75
IGHD3-10*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGGGAGCA	ATGGCTGGGGAAGGTATTATAA	TTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTATTATAATTATGGTATGGACGCC	SRGHRGSNGWGRYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	21	3	6	70
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	214	31	6	85.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  S  G  Y  C  W  N  W  S  R  R  P  P  G  K  G 
                    Query_12023  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGAGGGTCCTTCAGTGACAGTGGTTACTGTTGGAATTGGAGCCGCCGGCCACCAGGGAAGGGA  90
V  85.3% (214/251)  IGHV4-34*01  49   .............................T............------.......AC....GC....T.....A...C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  T  N  G  G  N  I  H  L  N  P  S  L  Q  S  R  V  T  M  S  A  D  T  S 
                    Query_12023  91   CTGGAGTGGATTGGCGAAATCACTAATGGTGGAAACATCCACCTCAATCCGTCCCTCCAGAGTCGAGTCACCATGTCAGCAGACACGTCC  180
V  85.3% (214/251)  IGHV4-34*01  133  ..............G.......A.C..A......G..C.A..TA...C.........A................A....T..........  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  R  V  N  S  V  T  A  A  D  T  S  V  Y  Y  C  S  R  G  H  R  G  S  N  G 
                    Query_12023  181  AAGAACCAGTTCTCCCTGAGAGTGAACTCCGTGACCGCCGCGGACACGTCTGTATATTATTGTTCGAGAGGCCACCGGGGGAGCAATGGC  270
V  85.3% (214/251)  IGHV4-34*01  223  ...................AGC...G...T..................G....G.....C...G.......-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  81.8% (18/22)    IGHD3-10*01  9    -------------------------------------------------------------------------------------....T  13

                                      DR3-IMGT------------------------>                                 
                                       W  G  R  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_12023  271  TGGGGAAGGTATTATAATTATGGTATGGACGCCTGGGGCCAGGGGACCACGGTCTCCGTCTCCTCA  336
D  81.8% (18/22)    IGHD3-10*01  14   .C...G..T........-------------------------------------------------  30
J  93.3% (42/45)    IGHJ6*02     18   ---------------------..........T.........A............A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_223857

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           439     2e-125
IGHD3-16*01                                                                                           12.2    36    
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTTGAGG	GATTAC	CAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTAC	ARSLRDYQPFYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	285	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_12024  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  98.6% (285/289)  IGHV5-51*03  6    .............................................................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_12024  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.6% (285/289)  IGHV5-51*03  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12024  181  GTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACTGC  270
V  98.6% (285/289)  IGHV5-51*03  186  ......................A................................................................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  S  L  R  D  Y  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_12024  271  CATGTATTACTGTGCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  359
V  98.6% (285/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  8    ----------------------------......-------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ------------------------------------------....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_223856

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           411     5e-117
IGHD1-26*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTGTTTTC	TGGGACCTACTAC	CTTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTAC	ARVFSGTYYLLDY	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	69	5	0	93.2
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	111	3	0	97.4
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	278	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  T  A  F  G  Y  S  F  T  
                    Query_12025  5    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTACGGCTTTTGGATACAGCTTTACCA  94
V  94.9% (278/293)  IGHV5-51*03  2    ....G.....G.......................................................A..G..C.................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  T  G  I  I  Y  P  R  D  G  E  T  R  Y  
                    Query_12025  95   GTTATTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGACGGGGATCATCTATCCTCGTGACGGTGAAACCAGATACA  184
V  94.9% (278/293)  IGHV5-51*03  92   .C..C..............................................T................G.....TC...T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  
                    Query_12025  185  GCCCGTCCTTCCAAGGCCAGGTCAGCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACA  274
V  94.9% (278/293)  IGHV5-51*03  182  ........................C....................................................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                
                                      T  A  M  Y  Y  C  A  R  V  F  S  G  T  Y  Y  L  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12025  275  CCGCCATGTATTATTGTGCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  362
V  94.9% (278/293)  IGHV5-51*03  272  .............C.........-----------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                  
D  92.3% (12/13)    IGHD1-26*01  8    -------------------------------.....G.......--------------------------------------------  20
J  100.0% (40/40)   IGHJ4*02     7    ------------------------------------------------........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_223859

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           408     4e-116
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ4*02                                                                                              69.9    4e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATCCAACGGTC	GTGGGAGCCACT	CTCCCCTTTCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATCCAACGGTCGTGGGAGCCACTCTCCCCTTTCTCTTGACTTT	AKSNGRGSHSPLSLDF	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	274	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  S  G  E  S  L  K  I  S  C  E  A  S  G  Y  S  F  T  N  Y
                    Query_12026  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGTCGGGGGAGTCTCTGAAGATCTCCTGTGAGGCTTCTGGGTACAGCTTTACCAATTA  90
V  95.5% (274/287)  IGHV5-51*03  6    ..............................A...C..........................A...G......A.............GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_12026  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGATTCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  95.5% (274/287)  IGHV5-51*03  96   ...................................................GA.....................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  A
                    Query_12026  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGCGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (274/287)  IGHV5-51*03  186  ...............G............................G...................A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        M  Y  F  C  A  K  S  N  G  R  G  S  H  S  P  L  S  L  D  F  W  G  Q  G  T  L  V  T  V  S
                    Query_12026  271  CATGTATTTCTGTGCGAAATCCAACGGTCGTGGGAGCCACTCTCCCCTTTCTCTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTC  360
V  95.5% (274/287)  IGHV5-51*03  276  ........A........-------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                           
D  91.7% (11/12)    IGHD1-26*01  7    -----------------------------........T...-------------------------------------------------  18
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------------------------......AC.............................  43

                                           
                                        S  
                    Query_12026  361  CTCAG  365
J  95.2% (40/42)    IGHJ4*02     44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_223858

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           304     9e-85
IGHD7-27*01                                                                                           12.2    31   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TACCCCTAGGCACGGTAACCC	CTGGGG	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATACCCCTAGGCACGGTAACCCCTGGGGTGACTCC	ARDTPRHGNPWGDS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  E  M  N  W  V  R  Q  V  P  G  K  G  L  
                    Query_12027  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACCTTCAGGAATTATGAGATGAACTGGGTCCGCCAGGTTCCAGGAAAGGGGCTGG  90
V  88.8% (222/250)  IGHV3-48*03  47   ............................T..............T.G......A...................C......G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  I  D  G  D  N  T  L  Y  A  D  S  V  R  G  R  F  T  T  S  R  D  N  A  
                    Query_12027  91   AGTGGCTCTCATACATCAGTATTGATGGTGATAATACACTTTATGCAGACTCTGTGAGGGGCCGATTCACCACGTCCAGAGACAACGCCA  180
V  88.8% (222/250)  IGHV3-48*03  137  .....G.T........T....G.AG....AG..CC.T.TAC..C.............A..............TC................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  T  P  R  H  G  N  
                    Query_12027  181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTATTGTGCGAGGGATACCCCTAGGCACGGTAACC  270
V  88.8% (222/250)  IGHV3-48*03  227  ............A.......................C.....................C........A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ------------->                                
                                      P  W  G  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12027  271  CCTGGGGTGACTCCTGGGGCCAGGGAACCTTGGTCACCGTCTCCTC  316
D  100.0% (6/6)     IGHD7-27*01  5    -......---------------------------------------  10
J  94.9% (37/39)    IGHJ4*02     8    -------.....A................C................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_179169

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*04                                                                                           405     4e-115
IGHD3-3*01                                                                                            33.4    2e-05 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*04	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCCCTAAGTG	ATTACGATTTTTGGAGT	TCGGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCCCTAAGTGATTACGATTTTTGGAGTTCGGGCTGGTTCGACCCC	AKPLSDYDFWSSGWFDP	292	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	68	6	0	91.9
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	111	3	0	97.4
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	276	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  T  C  A  A  S  G  F  T  F  T  
                    Query_12028  5    AGGTTCAGCTGGTGCAGTCTGGAGGAGGCCTGGTACAGCCGGGGGGGTCCCTGAGACTCACCTGTGCAGCCTCTGGATTCACCTTTACCG  94
V  94.2% (276/293)  IGHV3-23*04  2    ....G.........G.......G......T..........T..................T...........................G.A  91
                                         V  Q  L  V  E  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  S  G  S  G  G  V  T  N  Y  
                    Query_12028  95   ACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGGAGTGGGTCTCAGGTATTAGTGGTAGCGGTGGTGTCACAAACTACG  184
V  94.2% (276/293)  IGHV3-23*04  92   G.................................G......................C............T......AG....T......  181
                                      S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  
                    Query_12028  185  CAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACC  274
V  94.2% (276/293)  IGHV3-23*04  182  .........................................................................................A  271
                                      A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      P  A  L  Y  Y  C  A  K  P  L  S  D  Y  D  F  W  S  S  G  W  F  D  P  W  G  R  G  T  L  V  
                    Query_12028  275  CGGCCTTATATTACTGTGCGAAACCCCTAAGTGATTACGATTTTTGGAGTTCGGGCTGGTTCGACCCCTGGGGCCGGGGAACCCTGGTCA  364
V  94.2% (276/293)  IGHV3-23*04  272  .....G.................-------------------------------------------------------------------  294
                                      T  A  V  Y  Y  C  A  K                                                                    
D  100.0% (17/17)   IGHD3-3*01   3    ---------------------------------.................----------------------------------------  19
J  97.9% (46/47)    IGHJ5*02     5    -------------------------------------------------------....................A..............  39

                                                  
                                      T  V  S  S  
                    Query_12028  365  CCGTCTCCTCAG  376
J  97.9% (46/47)    IGHJ5*02     40   ............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_179168

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD7-27*01                                                                                           14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCA	AACTGGG	AACTCAATAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGACGTCAAACTGGGAACTCAATATACAACTGGTTCGACCCC	SRRQTGNSIYNWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12029  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.9% (238/243)  IGHV4-59*01  49   .......................................................G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12029  91   TGGATTGGATATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  ........G.................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  R  R  Q  T  G  N  S  I  Y  N 
                    Query_12029  181  CAATTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTTCGAGACGTCAAACTGGGAACTCAATATACAAC  270
V  97.9% (238/243)  IGHV4-59*01  229  ..G..........A...........................................G.....---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD7-27*01  3    --------------------------------------------------------------------.......---------------  9
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------------.....  5

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12029  271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (51/51)   IGHJ5*02     6    ..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_299243

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           318     6e-89
IGHD2-21*01                                                                                           14.1    8.4  
IGHJ1*01                                                                                              29.5    4e-04


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-21*01	IGHJ1*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGCCGGAGGGG	GGTGATT	CTCGTGGTCCTATTCCCGCG	GGGGC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  F  A  A  S  G  F  T  F  S  T  Y  R  L  R  W  V  R  Q  A  P  G  K  G  L  
                    Query_12030  1    GGTCCCTGAGACTCTCCTTTGCAGCCTCTGGATTCACCTTCAGTACCTATCGCTTGCGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-21*01  47   ..................G..........................G....A..A..AA................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  S  I  T  S  C  S  S  D  M  N  Y  A  D  A  V  K  G  R  F  T  I  S  G  D  T  A  
                    Query_12030  91   TGTGGGTCTCATCCATTACTAGTTGTAGTAGTGACATGAACTACGCAGACGCAGTGAAGGGCCGATTCACCATCTCCGGAGACACCGCCA  180
V  90.8% (226/249)  IGHV3-21*01  137  A.................G....A........T....AT...........T..........................A......A.....  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT---------------------------------------------------->                            
                                      K  S  T  L  F  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  G  A  G  G  G  *  F  
                    Query_12030  181  AGAGCACCCTGTTTCTGCAAATGAGCAGCCTGAGAGCCGAGGACACGGCGGTCTATTTCTGTGCGAGAGGGGCCGGAGGGGGGTGATTCT  270
V  90.8% (226/249)  IGHV3-21*01  227  ...A.T.A....A...........A........................T..G....A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-21*01  14   ---------------------------------------------------------------------------------.......--  20

                                                                                         
                                      S  W  S  Y  S  R  G  G  Q  G  S  L  V  P  L  P  S  
                    Query_12030  271  CGTGGTCCTATTCCCGCGGGGGCCAGGGGAGCCTGGTCCCCCTTCCCTCAG  321
J  81.8% (27/33)    IGHJ1*01     20   ------------------..........C.C.......A..G.CT......  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_202111

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           327     9e-92
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCGCCGGGACG	GTGGTAATTAC	CCTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCGCCGGGACGGTGGTAATTACCCTATTGACTAC	ARPRRDGGNYPIDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  D  S  G  G  S  I  R  T  D  G  Y  Y  W  S  W  I  R  Q  F  P  G  K  G 
                    Query_12031  1    ACCCTGTCCCTCACCTGCACTGACTCTGGTGGCTCCATCAGAACTGATGGTTACTACTGGAGCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  92.0% (229/249)  IGHV4-31*03  49   ......................T..................C.G..G............................CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  Y  H  T  G  S  T  Y  Y  T  P  S  V  R  G  R  V  T  M  S  V  D  T  S 
                    Query_12031  91   CTGGAGTGGATTGGGTTCATCTATCACACTGGGAGCACCTACTACACCCCGTCCGTCCGGGGTCGAGTCACCATGTCAGTGGACACGTCT  180
V  92.0% (229/249)  IGHV4-31*03  139  ................A.......T...G.................A.......C..AA.A.......T.....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  R  R  D  G  G  N 
                    Query_12031  181  AAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGACCTCGCCGGGACGGTGGTAAT  270
V  92.0% (229/249)  IGHV4-31*03  229  ...................A.....G...........................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD3-22*01  18   ----------------------------------------------------------------------------------.....T..  25

                                      -------------->                                  
                                       Y  P  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12031  271  TACCCTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
D  90.9% (10/11)    IGHD3-22*01  26   ...----------------------------------------------  28
J  100.0% (42/42)   IGHJ4*02     7    -------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_273

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           347     7e-98
IGHD2-8*02                                                                                            16.1    2.1  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD2-8*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAC	TACTGGCGGTG	AA	GATAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTACTACTGGCGGTGAAGATATC	ARSTTGGEDI	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  F  Y  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_12032  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTTCTACATGACCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-11*06  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  S  S  R  S  G  H  S  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_12032  91   AATGGGTTTCATTCATTAGTAGTAGAAGTGGTCACTCAAACTACGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  94.8% (235/248)  IGHV3-11*06  137  .G..........A............T...A..T..A...................................A..................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      R  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  S  T  T  G  G  E  D  
                    Query_12032  181  GGAACTCACTGTTTTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAAGTACTACTGGCGGTGAAGATA  270
V  94.8% (235/248)  IGHV3-11*06  227  A...........A.C...................................G.................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD2-8*02   10   -------------------------------------------------------------------------......T....------  20
J  100.0% (38/38)   IGHJ3*02     11   --------------------------------------------------------------------------------------....  14

                                      ->                                
                                      I  W  G  Q  G  T  M  V  T  V  S  S
                    Query_12032  271  TCTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  304
J  100.0% (38/38)   IGHJ3*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_272

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           361     4e-102
IGHD3-16*01                                                                                           12.2    30    
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTTTCC	TGGGGG	N/A	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTCCTGGGGGTGCTTATGATATC	ARHFPGGAYDI	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	238	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  F  C  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12033  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTTCTGCAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (238/245)  IGHV4-59*08  49   ...............................G.................A...G....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12033  91   TGGATTGGGTATATCTCTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  97.1% (238/245)  IGHV4-59*08  139  ................A.........................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  H  F  P  G  G  A  Y  D  I 
                    Query_12033  181  CAGTTCTCCCTGAAGCTGACCTCTGTGTCCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATTTTCCTGGGGGTGCTTATGATATC  270
V  97.1% (238/245)  IGHV4-59*08  229  ...................G.......A.....................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*01  17   -----------------------------------------------------------------------......-------------  22
J  97.9% (46/47)    IGHJ3*02     4    -----------------------------------------------------------------------------.....T.......  16

                                                                        
                                       W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12033  271  TGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  304
J  97.9% (46/47)    IGHJ3*02     17   ..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_270

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           10.3    131   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	TCTCCC	GTGGG	G	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGATCTCCCGTGGGGCTACGTTGACTAC	AGDLPWGYVDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_12034  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  95.2% (276/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  Y  A  Q 
                    Query_12034  92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTATGCACAG  181
V  95.2% (276/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_12034  182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  G  D  L  P  W  G  Y  V  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_12034  272  ATATATTACTGTGCGGGAGATCTCCCGTGGGGCTACGTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  95.2% (276/290)  IGHV1-18*01  277  G.G............A....-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  95.7% (45/47)    IGHJ4*02     2    --------------------------------....T.....................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_162549

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           251     9e-69
IGHD3-10*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	CGCCTCAGCATGGAC	TGGTACGGGGAGT	CGAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGCCTCAGCATGGACTGGTACGGGGAGTCGACCTACTACTACTACGGGATGGACGTC	ARLSMDWYGESTYYYYGMDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	95	19	0	83.3
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	200	40	0	83.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  M  S  R  H  Y  W  S  W  V  R  Q  P  P  G  G  G  L  E 
                    Query_12035  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGCGACTCCATGAGTAGGCACTATTGGAGTTGGGTTCGACAGCCCCCGGGAGGGGGACTGGAG  90
V  83.3% (200/240)  IGHV4-59*08  49   ...................C.........T.G......C.....TT....C.....C...A.C..G........A..GAA..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  F  I  Y  Y  S  G  T  T  K  S  N  P  S  L  E  R  R  V  S  I  S  I  D  T  T  R  Y 
                    Query_12035  91   TGGATTGCGTTCATCTACTACAGTGGGACTACCAAGTCCAATCCCTCCCTCGAGAGGCGCGTCTCCATATCAATAGACACGACCAGATAT  180
V  83.3% (200/240)  IGHV4-59*08  139  .......G..AT.....T..........GC.....C.A...C.........A....T..A...A........G........T...AGA.C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  L  S  M  D  W  Y  G  E  S 
                    Query_12035  181  CAGTTCTCCCTGAAATTGAGGTCTGTGACCGCCGCAGACACGGCCATCTATTACTGCGCGCGCCTCAGCATGGACTGGTACGGGGAGTCG  270
V  83.3% (200/240)  IGHV4-59*08  229  ..............GC....C........................G.G........T...------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  92.3% (12/13)    IGHD3-10*01  10   ---------------------------------------------------------------------------....T........--  22

                                      GT------------------------>                                 
                                       T  Y  Y  Y  Y  G  M  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_12035  271  ACCTACTACTACTACGGGATGGACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  330
J  96.6% (56/58)    IGHJ6*02     5    --...............T................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_162548

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           349     2e-98
IGHD4-17*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GCCA	TGACTACGGTGAC	AACGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGCCATGACTACGGTGACAACGCCTTTGCTTAC	AKGHDYGDNAFAY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12036  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-23*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  N  I  G  G  T  G  G  N  R  V  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_12036  91   AGTGGGTCTCAAATATTGGAGGTACTGGTGGTAACAGAGTCTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  94.8% (236/249)  IGHV3-23*01  137  ...........GC....A.T....G........G..C.TA...............................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  H  D  Y  G  D  N  
                    Query_12036  181  AGAACACGCTCTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAAGGCCATGACTACGGTGACAACG  270
V  94.8% (236/249)  IGHV3-23*01  227  ..........G.........................................A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (13/13)   IGHD4-17*01  1    -------------------------------------------------------------------------.............----  13

                                      ---------->                                  
                                      A  F  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12036  271  CCTTTGCTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  95.5% (42/44)    IGHJ4*02     5    -.....AC.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_162545

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           410     1e-116
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGCGGC	GCTACTAC	ACTCCCCCCCACAAAAGG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGCGGCGCTACTACACTCCCCCCCACAAAAGGCGGTATGGACGTC	ARLRGATTLPPTKGGMDV	292	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	70	1	0	98.6
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	106	8	0	93
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  R  F  T  N  
                    Query_12037  8    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGGTTCACCAATT  97
V  95.2% (276/290)  IGHV5-51*03  5    ..................................................................G............C..T....GC.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  F  Y  S  
                    Query_12037  98   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCAGATACCTTTTACAGTC  187
V  95.2% (276/290)  IGHV5-51*03  95   .........................................................................T......AGA.....C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  R  V  T  M  S  V  D  R  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_12037  188  CGTCCTTCCAAGGCCGGGTCACCATGTCAGTCGACAGGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCG  277
V  95.2% (276/290)  IGHV5-51*03  185  ...............A.........C....C.....A.....................................................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><----------------------CDR3-IMGT--------------------->                      
                                      A  M  Y  Y  C  A  R  L  R  G  A  T  T  L  P  P  T  K  G  G  M  D  V  W  G  Q  G  T  P  V  
                    Query_12037  278  CCATGTATTACTGTGCGAGACTTCGCGGCGCTACTACACTCCCCCCCACAAAAGGCGGTATGGACGTCTGGGGCCAAGGGACCCCGGTCT  367
V  95.2% (276/290)  IGHV5-51*03  275  ....................----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (8/8)     IGHD1-26*01  13   -----------------------------........-----------------------------------------------------  20
J  95.7% (44/46)    IGHJ6*02     17   -------------------------------------------------------............................A.....A  51

                                                 
                                      S  V  S  S 
                    Query_12037  368  CCGTCTCCTCA  378
J  95.7% (44/46)    IGHJ6*02     52   ...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_162544

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12038  1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  87.0% (214/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_12038  91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCACCATCTCAGTAGACAAGTCCAAG  180
V  87.0% (214/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A................A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_12038  181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  87.0% (214/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_12038  271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_162547

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           302     3e-84
IGHD2-15*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GTCGGGAAGAAC	AGTGGTG	TCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTCGGGAAGAACAGTGGTGTCTTTTGACTTA	AKSGRTVVSFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	220	27	0	89.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  T  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12039  1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCAACTTTAGCACGTATGCCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.1% (220/247)  IGHV3-23*01  47   ......................A.............C........GC..........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  N  S  T  K  Y  A  D  S  V  K  G  R  I  T  I  S  R  D  N  S  
                    Query_12039  91   AGTGGGTCTCAGCCATCAGTGGCAGTGGTAATAGCACAAAATATGCAGACTCCGTTAAGGGCCGGATCACCATCTCCAGAGACAATTCCA  180
V  89.1% (220/247)  IGHV3-23*01  137  .............T..T.....T......GG.......T.C..C...........G.........T........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  R  M  I  Y  L  Q  M  N  S  M  R  A  E  D  T  A  V  Y  L  C  A  K  S  G  R  T  V  V  S  
                    Query_12039  181  AGAGAATGATATATCTTCAAATGAACAGTATGAGAGCCGAGGACACGGCCGTATATCTTTGTGCGAAGTCGGGAAGAACAGTGGTGTCTT  270
V  89.1% (220/247)  IGHV3-23*01  227  ...AC.C.C.G.....G...........CC..........................TAC........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-15*01  11   -------------------------------------------------------------------------------.......----  17
J  90.7% (39/43)    IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                  
                                      F  D  L  W  G  Q  G  I  Q  V  T  V  S  S  
                    Query_12039  271  TTGACTTATGGGGCCAGGGAATCCAGGTCACCGTCTCCTCAG  312
J  90.7% (39/43)    IGHJ4*02     7    ......AC.............C..T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_125868

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           361     4e-102
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	112	2	0	98.2
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_12040  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  96.4% (240/249)  IGHV4-31*03  50   .....TCC...A....................................G.........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  C  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  
                    Query_12040  94   TGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTGCAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCTA  183
V  96.4% (240/249)  IGHV4-31*03  140  ..............T......A....................A......................G........................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A  
                    Query_12040  184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCAA  273
V  96.4% (240/249)  IGHV4-31*03  230  .....................................................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD2-21*02  5    ----------------------------------------------------------------------..........G.......--  22

                                      ------------->                                  
                                      N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12040  274  ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (48/48)   IGHJ4*02     1    ................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_162541

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           375     3e-106
IGHD6-13*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCTCGCCACAGAA	AGCAGCAGCT	ATAACTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCTCGCCACAGAAAGCAGCAGCTATAACTTACTACTTTGACTAC	ARVSPQKAAAITYYFDY	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	242	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  H  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12041  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACCACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.2% (242/244)  IGHV4-59*01  49   ................................................T.........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12041  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  99.2% (242/244)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  P  Q  K  A  A  A  I 
                    Query_12041  181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTCTCGCCACAGAAAGCAGCAGCTATA  270
V  99.2% (242/244)  IGHV4-59*01  229  ....................C...........................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  7    -----------------------------------------------------------------------------..........---  16

                                      ----------------->                                  
                                       T  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12041  271  ACTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  100.0% (48/48)   IGHJ4*02     1    ----................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_162540

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*07                                                                                           350     8e-99
IGHD1-7*01                                                                                            25.7    0.003
IGHJ3*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*07	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCACA	ACT	TATAACTGGAACT	TGGATGGTGTCA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAACTTATAACTGGAACTTGGATGGTGTCAATGCTTTTGATATC	TTTYNWNLDGVNAFDI	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	254	6	6	0	0	100
Total	N/A	N/A	254	239	15	0	94.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  N  F  S  N  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12042  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCAATTTCAGTAACGCCTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.1% (239/254)  IGHV3-15*07  47   .......T.......................TT...C.....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  R  K  S  D  G  E  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_12042  91   AGTGGGTCGGCCGTATTAAAAGGAAAAGTGATGGTGAGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATTTCAAGAGATG  180
V  94.1% (239/254)  IGHV3-15*07  137  ......................C....C........G..........................................C..........  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  A  K  D  T  V  Y  L  Q  M  S  S  L  K  T  E  D  T  A  V  Y  H  C  T  T  T  Y  N  W  N  
                    Query_12042  181  ATGCAAAAGACACAGTGTATCTTCAAATGAGCAGCCTGAAAACCGAGGACACAGCCGTGTATCACTGTACCACAACTTATAACTGGAACT  270
V  94.1% (239/254)  IGHV3-15*07  227  ..T.....A....GC.......G.......A...............................T...........----------------  300
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (13/13)   IGHD1-7*01   3    -----------------------------------------------------------------------------.............  15

                                      R3-IMGT------------------>                                  
                                      L  D  G  V  N  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12042  271  TGGATGGTGTCAATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  330
J  100.0% (48/48)   IGHJ3*02     3    ------------................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_162543

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           352     3e-99
IGHD6-13*01                                                                                           18.0    0.55 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CACG	AGCAGCTGG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACACGAGCAGCTGGATTGACTAC	ARDTSSWIDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	235	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12043  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (235/245)  IGHV4-59*01  49   ...............................G...........G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  T  G  S  T  N  Y  N  P  S  L  K  S  Q  F  T  I  S  V  D  T  S  K  N 
                    Query_12043  91   TGGATTGGGTATATCTTTTACACTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCAATTCACCATATCAGTAGACACGTCGAAGAAC  180
V  95.9% (235/245)  IGHV4-59*01  139  ................A.....G...................................G.G......................C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  I  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  S  S  W  I  D  Y  W 
                    Query_12043  181  CAGATCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGACACGAGCAGCTGGATTGACTACTGG  270
V  95.9% (235/245)  IGHV4-59*01  229  ...T...........C...G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-13*01  10   ---------------------------------------------------------------------.........------------  18
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------...........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_12043  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (42/42)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_162542

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           364     6e-103
IGHD3-16*01                                                                                           14.1    9.5   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CACTCAATCGAGGACTCCG	TGCTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACTCAATCGAGGACTCCGTGCTTATTACTTTGATCAT	ATLNRGLRAYYFDH	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	70	4	0	94.6
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	98	16	0	86
CDR3-IMGT (germline)	291	294	4	4	0	0	100
Total	N/A	N/A	291	262	29	0	90


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  R  E  S  L  K  T  S  C  K  G  S  G  Y  S  F  A  
                    Query_12044  4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGAGGGAGTCTCTGAAGACCTCCTGTAAGGGGTCTGGATACAGTTTTGCCA  93
V  90.0% (262/291)  IGHV5-51*03  2    ..................................A......G...............T............T...........C...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  H  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  T  D  S  E  T  H  Y  
                    Query_12044  94   CACACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTACTGACTCTGAAACCCACTACA  183
V  90.0% (262/291)  IGHV5-51*03  92   GCT.............................................................T...GG.........T...AGA....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  R  G  Q  V  T  I  S  A  D  R  S  I  T  T  A  Y  L  Q  W  N  P  L  R  A  S  D  
                    Query_12044  184  GCCCGTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACAGATCCATCACTACCGCCTACCTGCAGTGGAACCCATTGAGGGCCTCGGACA  273
V  90.0% (262/291)  IGHV5-51*03  182  ............A..........................AG.......GC...................G.AGCC...A...........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  I  Y  Y  C  A  T  L  N  R  G  L  R  A  Y  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  
                    Query_12044  274  CCGCCATATATTACTGCGCGACACTCAATCGAGGACTCCGTGCTTATTACTTTGATCATTGGGGCCAGGGAACCCTGGTCACAGTCTCCT  363
V  90.0% (262/291)  IGHV5-51*03  272  .......G........T....---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD3-16*01  28   ----------------------------------------.......-------------------------------------------  34
J  91.3% (42/46)    IGHJ4*02     3    -----------------------------------------------........CT.C.......................C.......  45

                                         
                                      S  
                    Query_12044  364  CAG  366
J  91.3% (42/46)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_278768

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           405     4e-115
IGHD5-12*01                                                                                           14.1    9.9   
IGHJ3*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTCCGTTTCGTAGAGATGC	CTACAATTAC	CGGACCACC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTCCGTTTCGTAGAGATGCCTACAATTACCGGACCACCGATGCTTTTGATATC	ARDRPFRRDAYNYRTTDAFDI	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  T  V  S  C  K  A  S  G  G  T  L  S  S  F
                    Query_12045  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGACGGTCTCCTGCAAGGCTTCTGGAGGCACCCTCAGCAGCTT  90
V  94.5% (275/291)  IGHV1-69*01  6    ..................................................A............................T.........A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  F  I  P  T  F  G  T  T  N  S  A  Q
                    Query_12045  91   TGTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGTTCATCCCTACCTTTGGCACAACAAACTCCGCACA  180
V  94.5% (275/291)  IGHV1-69*01  96   ..C....................................................A.........T......T...G......A......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  S  A  D  V  S  T  S  T  A  Y  M  V  L  S  S  L  T  S  A  D  T  A
                    Query_12045  181  GAAGTTCCAGGGCAGAGTCACGATTAGTGCGGACGTTTCCACGAGCACAGCCTACATGGTGCTGAGCAGCCTGACATCTGCGGACACGGC  270
V  94.5% (275/291)  IGHV1-69*01  186  ..........................CC.......AA......................A..............G.....A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        V  Y  Y  C  A  R  D  R  P  F  R  R  D  A  Y  N  Y  R  T  T  D  A  F  D  I  W  G  Q  G  T
                    Query_12045  271  CGTGTATTACTGTGCGAGAGATCGTCCGTTTCGTAGAGATGCCTACAATTACCGGACCACCGATGCTTTTGATATCTGGGGCCAAGGGAC  360
V  94.5% (275/291)  IGHV1-69*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  90.0% (9/10)     IGHD5-12*01  14   ------------------------------------------....G.....--------------------------------------  23
J  100.0% (49/49)   IGHJ3*02     2    -------------------------------------------------------------.............................  30

                                                          
                                        M  V  T  V  S  S  
                    Query_12045  361  AATGGTCACCGTCTCTTCAG  380
J  100.0% (49/49)   IGHJ3*02     31   ....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_224875

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD3-3*01                                                                                            18.0    0.59 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGCCTCGTGCCTG	GGAGTGGTT	TTGAGGCTATTCCTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGCCTCGTGCCTGGGAGTGGTTTTGAGGCTATTCCTGCCTAC	AKSLVPGSGFEAIPAY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_12046  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTTAGTAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-23*01  47   ............................T..............C.............G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  G  I  T  G  S  G  D  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12046  91   AGTGGCTCTCAGGTATTACTGGCAGTGGTGATAACACCTACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (236/248)  IGHV3-23*01  137  .....G......C.....G...T.......G..G...A....................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  S  L  V  P  G  S  G  
                    Query_12046  181  AGAACACGCTGTATCTGCAAATAAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAAAAGCCTCGTGCCTGGGAGTGGTT  270
V  95.2% (236/248)  IGHV3-23*01  227  ......................G.............................A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD3-3*01   15   ---------------------------------------------------------------------------------.........  23

                                      T------------------>                                  
                                      F  E  A  I  P  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12046  271  TTGAGGCTATTCCTGCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (38/38)   IGHJ4*02     11   ----------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_77334

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           327     9e-92
IGHD3-10*02                                                                                           14.1    8.6  
IGHJ6*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	GGGGGGACAACACAATATATTCCCTGCGTATTCGTCGT	CTATGTT	N/A	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGGGGGGGACAACACAATATATTCCCTGCGTATTCGTCGTCTATGTTCGTC	SRGGQHNIFPAYSSSMFV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	228	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  S  F  S  K  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12047  1    GGTCCCTGAGACTCTCCTGTGTGGCCTCTGGATTCAGTTTCAGTAAATATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.3% (228/247)  IGHV3-21*01  47   .....................CA.............CC.......GC....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  C  I  S  S  S  T  S  Y  T  Y  Y  G  D  S  V  Q  G  R  F  T  I  S  R  D  N  A  
                    Query_12047  91   AGTGGGTCTCATGCATTAGTAGTAGTACGAGTTACACTTATTACGGAGACTCAGTGCAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.3% (228/247)  IGHV3-21*01  137  ............C..............GT.......TA..C....C..........A.................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  S  R  G  G  Q  H  N  I  F  
                    Query_12047  181  AGAATTCACTGTTTCTCCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTTCGAGGGGGGGACAACACAATATATTCC  270
V  92.3% (228/247)  IGHV3-21*01  227  ....C.......A...G.............................................G....-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      IMGT--------------------->                                 
                                      P  A  Y  S  S  S  M  F  V  W  G  Q  G  T  T  V  T  L  S  S 
                    Query_12047  271  CTGCGTATTCGTCGTCTATGTTCGTCTGGGGCCAAGGGACCACGGTCACCCTCTCCTCA  329
D  100.0% (7/7)     IGHD3-10*02  7    ---------------.......-------------------------------------  13
J  97.3% (36/37)    IGHJ6*02     26   ----------------------............................G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_30035

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           291     6e-81
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGACA	TGGCGACTAT	TATGATAGTAGCGGTT	TTGCAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTCGACATGGCGACTATTATGATAGTAGCGGTTTTGCAGAC	TRHGDYYDSSGFAD	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	116	63	46	5	12	73
CDR2-IMGT	117	146	30	25	5	0	83.3
FR3-IMGT	147	260	114	105	9	0	92.1
CDR3-IMGT (germline)	261	268	8	7	1	0	87.5
Total	N/A	N/A	268	229	27	12	85.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------------FR2-IMGT--
                                         S  L  R  L  S  C  A  A  S  G  I  S  F  S  D  S  S  Q  Y  S  S  I  H  W  V  R  Q  A  P  
                    Query_12048  1    GGTCCCTGAGACTCTCCTGTGCGGCTTCTGGGATCTCCTTCAGTGACTCTTCTCAGTACTCTTCTATACACTGGGTCCGCCAGGCTCCCG  90
V  85.4% (229/268)  IGHV3-73*01  47   .........A............A..C......T..A.........G....G..------------..G..................T...  124
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A              M  H  W  V  R  Q  A  S  

                                      -------------------------><----------CDR2-IMGT---------><---------------------------------
                                      G  R  G  L  E  W  L  G  R  M  R  S  K  P  N  A  Y  A  T  T  Y  A  A  S  V  K  G  R  F  T  
                    Query_12048  91   GGAGAGGCCTGGAGTGGCTTGGCCGTATGAGAAGCAAACCTAACGCATACGCGACAACATATGCTGCGTCGGTGAAAGGCAGGTTCACCA  180
V  85.4% (229/268)  IGHV3-73*01  125  ...A...G.........G..........T.........G.....AGT.........G.................................  214
                                      G  K  G  L  E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  R  D  D  P  K  N  M  A  Y  L  Q  M  N  S  L  K  A  E  D  T  A  M  Y  Y  C  T  R  H  
                    Query_12048  181  TTTCCAGAGATGACCCAAAGAACATGGCGTATCTGCAAATGAACAGCCTGAAAGCCGAGGACACGGCCATGTACTATTGTACTCGACATG  270
V  85.4% (229/268)  IGHV3-73*01  215  .C...........TT.........C............................A..............G....T..C......A....--  302
                                      I  S  R  D  D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R     

                                      -------CDR3-IMGT--------------->                                  
                                      G  D  Y  Y  D  S  S  G  F  A  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12048  271  GCGACTATTATGATAGTAGCGGTTTTGCAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  93.8% (15/16)    IGHD3-22*01  8    --------...........T....------------------------------------------  23
J  100.0% (36/36)   IGHJ4*02     13   ------------------------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_30036

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACAGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACAGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12049  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.6% (225/243)  IGHV4-34*01  49   ................................G...T..................G...........................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  L  S  L  D  M  S  K  K 
                    Query_12049  91   TGGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGCGTCTCCTTATCATTAGACATGTCCAAGAAG  180
V  92.6% (225/243)  IGHV4-34*01  139  .............................C..................C..A.......A...A..A.....G......C.........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  V  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y 
                    Query_12049  181  CAGTTCTCCGTGAAGGTGACGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAACAGTAAAGGGGGTTATTACTGTCTAC  270
V  92.6% (225/243)  IGHV4-34*01  229  .........C.....C...GC..........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  20   --------------------------------------------------------------------------..........------  29

                                      -------------------->                                 
                                       Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12049  271  CAGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  100.0% (40/40)   IGHJ6*02     23   --------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_30031

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	247	223	21	3	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12050  1    ACCCTGTCCCTCACCTGCATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  87
V  90.3% (223/247)  IGHV4-4*02   49   ..................GC.........T...TCC......A..AG........GG.......................G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  K 
                    Query_12050  88   GAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCAAG  177
V  90.3% (223/247)  IGHV4-4*02   139  .......................T......A................................G.......A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G  W 
                    Query_12050  178  AATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGTGGGTAGCAGTGGCTGG  267
V  90.3% (223/247)  IGHV4-4*02   229  ..CC.GT..........G....GC..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-19*01  6    -----------------------------------------------------------------------------.............  18

                                      -------->                                
                                       L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_12050  268  CTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  308
J  95.0% (38/40)    IGHJ4*02     7    -......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_30032

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           341     5e-96
IGHD5-12*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TCAAGGATTGA	ATATAGTGACTAC	AACCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATCAAGGATTGAATATAGTGACTACAACCCCCTTGACTTC	AKSRIEYSDYNPLDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12051  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (233/248)  IGHV3-30*18  47   ....................................C........GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  G  N  R  N  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_12051  91   AGTGGGTGGCAGTTATTTCATATGATGGAGGTAATAGAAACTATGCAGACTCCGTGAAGGGCCGATTCTCCATCTCCAGAGACAATTCCA  180
V  94.0% (233/248)  IGHV3-30*18  137  ................A............A......A.T.............................A.....................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  F  L  Q  M  S  T  V  R  A  E  D  T  A  V  Y  Y  C  A  K  S  R  I  E  Y  S  D  
                    Query_12051  181  AGAACACACTGTTTCTGCAAATGAGCACCGTGAGAGCTGAGGACACGGCTGTTTATTATTGTGCGAAATCAAGGATTGAATATAGTGACT  270
V  94.0% (233/248)  IGHV3-30*18  227  .......G....A...........A..G.C......................G.....C.........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.3% (12/13)    IGHD5-12*01  5    -------------------------------------------------------------------------------........G..  15

                                      ---------------->                                  
                                      Y  N  P  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12051  271  ACAACCCCCTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  92.3% (12/13)    IGHD5-12*01  16   ..-------------------------------------------------  17
J  97.6% (41/42)    IGHJ4*02     7    ---------......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_30033

Length=418
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            441     6e-126
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	292	360	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	70	5	0	93.3
CDR1-IMGT	79	102	24	24	0	0	100
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	113	1	0	99.1
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	289	7	0	97.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_12052  4    CAGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACC  93
V  97.6% (289/296)  IGHV1-2*04   1    .....G........G........G.............AG...................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 
                    Query_12052  94   GGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTAT  183
V  97.6% (289/296)  IGHV1-2*04   91   ...........................................T..............................................  180
                                       G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 
                    Query_12052  184  GCACAGAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGAC  273
V  97.6% (289/296)  IGHV1-2*04   181  ..........................................................................................  270
                                       A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                      -----------------><-----------------------------CDR3-IMGT----------------------------->   
                                       T  A  V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W 
                    Query_12052  274  ACGGCCGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGG  363
V  97.6% (289/296)  IGHV1-2*04   271  .............A............----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.7% (18/19)    IGHD3-22*01  7    --------------------------------------...........G.......---------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ---------------------------------------------------------------....A......................  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_12052  364  GGCCAAGGGACCACGGTCACCGTCTCCTCA  393
J  98.2% (56/57)    IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41024880


Query= Query_30038

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           25.7    0.003
IGHJ5*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGGGGGCGCGCCC	GTATTACTTTGATAGT	CATAGGCCT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCGGGGGCGCGCCCGTATTACTTTGATAGTCATAGGCCTTTCGACTCC	ARAGARPYYFDSHRPFDS	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  R  G  L  E  
                    Query_12053  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAGT  93
V  94.7% (230/243)  IGHV4-59*01  50   .....TCC...A.............................A....................................A...........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  M  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  S  K  N  
                    Query_12053  94   GGATTGGGTATATGTATTACAGTGGTAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCCTATCAGTAGACACGTCCAAGAACC  183
V  94.7% (230/243)  IGHV4-59*01  140  .............C...........G.......................................A........................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      L  F  S  L  K  L  F  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  A  R  P  Y  Y  F  D  
                    Query_12053  184  TGTTCTCCCTGAAGCTGTTCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGCGGGGGCGCGCCCGTATTACTTTGATA  273
V  94.7% (230/243)  IGHV4-59*01  230  A................AG........................................A...---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  93.8% (15/16)    IGHD3-22*01  1    ----------------------------------------------------------------------------........A.....  14

                                      ------------------->                                  
                                      S  H  R  P  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_12053  274  GTCATAGGCCTTTCGACTCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  327
D  93.8% (15/16)    IGHD3-22*01  15   ..----------------------------------------------------  16
J  95.3% (41/43)    IGHJ5*01     9    -----------.................A...A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_30039

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           276     3e-76
IGHD7-27*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD7-27*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGACAAGGGG	ACTGGGGA	N/A	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAAGGGGACTGGGGATGGTACTTCGACCTC	ARRQGDWGWYFDL	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	60	33	26	4	3	78.8
FR2-IMGT	61	111	51	44	7	0	86.3
CDR2-IMGT	112	129	21	12	6	3	57.1
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	252	218	28	6	86.5


Alignments

                                      <--------FR1-IMGT---------><-----------CDR1-IMGT-----------><--------------------FR2-IMGT-
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  S  A  G  H  Y  W  S  W  I  R  Q  T  P  G  K 
                    Query_12054  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGCAGTGCTGGTCACTATTGGAGTTGGATCCGCCAGACCCCCGGAAAG  90
V  86.5% (218/252)  IGHV4-31*03  49   ...............................G............---..G....T....C.....C............CA...A..G...  135
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S     G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K 

                                      --------------------><-----CDR2-IMGT-----><-----------------------------------------------
                                       G  L  E  W  M  G  Y  I  F  Y  T  V     P  Y  Y  N  P  S  L  K  S  R  L  T  M  S  G  D  T 
                    Query_12054  91   GGCCTGGAGTGGATGGGTTACATCTTTTATACTGTGC---CATACTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCAGGAGACACC  177
V  86.5% (218/252)  IGHV4-31*03  136  ..............T..G.......A...C.G..G.AGCA.C..............C............G.T.....A....T......G  225
                                       G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T 

                                      -----FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT
                                       A  K  N  Q  F  S  L  R  L  T  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  R  Q  G  D  W  G 
                    Query_12054  178  GCTAAGAACCAGTTTTCCCTGAGGCTGACCTCTGTGACTTCCGCGGACACGGCCGTGTATTACTGTGCGAGACGACAAGGGGACTGGGGA  267
V  86.5% (218/252)  IGHV4-31*03  226  T.............C.......A.....G..........G................................------------------  297
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                   
D  100.0% (8/8)     IGHD7-27*01  4    ----------------------------------------------------------------------------------........  11

                                      -------------->                                  
                                       W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_12054  268  TGGTACTTCGACCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  316
J  98.0% (48/49)    IGHJ2*01     5    ...........T.....................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_85482

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           324     8e-91
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCTCCCCGCGGTGCAAG	AGTGGCTG	CCAGGAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTGCCAGGAGACTGGTACTTCGATCTC	ARFLPAVQEWLPGDWYFDL	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  T  R  N  Y  W  S  W  I  R  Q  P  P  G  E  R  L  E 
                    Query_12055  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCACTAGAAACTACTGGAGCTGGATTCGGCAGCCCCCAGGGGAGAGACTGGAG  90
V  92.6% (225/243)  IGHV4-59*08  49   ...................C...........G........G...TT................C...............A..G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  H  Y  S  G  A  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  P  K  N 
                    Query_12055  91   TGGATAGCGTATATCCATTACAGTGGGGCCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGCCCAAGAAC  180
V  92.6% (225/243)  IGHV4-59*08  139  .....T.G.......T...........AG...........................................G........T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  K  M  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  F  L  P  A  V  Q  E  W  L 
                    Query_12055  181  CAGTTCTCCCTGAAGATGACCTCTGTGACCGCCGCAGACACGGCCATGTATTACTGTGCGAGATTCCTCCCCGCGGTGCAAGAGTGGCTG  270
V  92.6% (225/243)  IGHV4-59*08  229  ...............C...G.........................G.................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  10   ----------------------------------------------------------------------------------........  17

                                      ----------------------->                                  
                                       P  G  D  W  Y  F  D  L  W  G  R  G  T  L  V  A  V  S  S  
                    Query_12055  271  CCAGGAGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCGCTGTCTCGTCAG  328
J  96.1% (49/51)    IGHJ2*01     3    -------......................................A.......C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_153198

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           341     5e-96
IGHD1-26*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GACTC	GGTATAGT	TTCAAGTATGCTTTC	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAACAGAGACTCGGTATAGTTTCAAGTATGCTTTCGACGTC	TTETRYSFKYAFDV	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	105	9	0	92.1
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	237	19	0	92.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  F  S  S  T  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12056  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCTTCAGTAGCACCTGGATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  92.6% (237/256)  IGHV3-15*01  47   .......T...........................A.T.......A.G.........G.....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  R  T  D  G  G  T  T  D  H  A  T  P  V  K  G  R  F  S  I  S  R  D  
                    Query_12056  91   AGTGGGTTGGCCGCATTAAAAGCAGAACTGATGGTGGGACAACAGACCACGCTACACCCGTGAAAGGCAGATTCTCCATCTCAAGAGATG  180
V  92.6% (237/256)  IGHV3-15*01  137  .............T..........A......................T.....G....................A...............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  S  T  L  F  L  Q  M  S  S  L  K  T  E  D  T  G  V  Y  Y  C  T  T  E  T  R  Y  S  
                    Query_12056  181  ATTCAAAAAGTACGCTGTTTCTGCAAATGAGCAGCCTGAAAACCGAGGACACAGGCGTTTATTACTGTACAACAGAGACTCGGTATAGTT  270
V  92.6% (237/256)  IGHV3-15*01  227  .........AC.......A...........A.......................C...G...........C.....--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (8/8)     IGHD1-26*01  1    ---------------------------------------------------------------------------------........-  8

                                      IMGT--------------->                                 
                                      F  K  Y  A  F  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12056  271  TCAAGTATGCTTTCGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  100.0% (39/39)   IGHJ6*02     24   --------------.......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_153196

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           213     2e-57
IGHD3-16*01                                                                                           25.7    0.003
IGHJ3*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACCTAT	GTTTGGGGGAGTT	TACGCCGCAATCACGATTGCCTTAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACCTATGTTTGGGGGAGTTTACGCCGCAATCACGATTGCCTTACTGTC	ARGLLIEDPTYVWGSLRRNHDCLTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	35	16	0	68.6
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	87	27	0	76.3
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	190	54	0	77.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  V  R  Q  P  P  G  G  G  L  Q 
                    Query_12057  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGAACTTACTACTGGCACTGGGTGCGGCAACCTCCAGGGGGGGGTCTGCAG  90
V  77.9% (190/244)  IGHV4-59*01  49   .......................C.......G.......A.T.G..........AG....A.C.....G..C......AA...A...G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  A  M  F  L  S  T  G  T  T  L  Y  N  P  S  V  R  G  R  V  T  V  S  G  D  M  S  R  N 
                    Query_12057  91   TGGCTTGCCATGTTCTTATCCACTGGGACCACCCTCTACAACCCCTCCGTCAGGGGTCGTGTCACCGTGTCGGGCGACATGTCTCGGAAT  180
V  77.9% (190/244)  IGHV4-59*01  139  ...A...GGTATA...AT.A..G.....G....AA.............C...A.A....A......A.A..A.TA....C...CAA...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_12057  181  CAGTTGTCCCTCAACCTCATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACCTAT  270
V  77.9% (190/244)  IGHV4-59*01  229  .....C.....G..G..G.G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  L  R  R  N  H  D  C  L  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_12057  271  GTTTGGGGGAGTTTACGCCGCAATCACGATTGCCTTACTGTCTGGGGCCAGGGGACACCGGTCACCGTCTCTTCAG  346
D  100.0% (13/13)   IGHD3-16*01  14   .............---------------------------------------------------------------  26
J  92.1% (35/38)    IGHJ3*01     13   --------------------------------------............A......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_153197

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           444     7e-127
IGHD3-16*01                                                                                           12.2    36    
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTTGAGG	GATTAC	CAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTAC	ARSLRDYQPFYFDY	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	71	0	0	100
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	113	1	0	99.1
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	290	287	3	0	99


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  
                    Query_12058  5    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACT  94
V  99.0% (287/290)  IGHV5-51*03  5    ..............................................................................G........G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  
                    Query_12058  95   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCC  184
V  99.0% (287/290)  IGHV5-51*03  95   ..........................................................................................  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_12058  185  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACTG  274
V  99.0% (287/290)  IGHV5-51*03  185  ........................................................................................C.  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                  
                                      A  M  Y  Y  C  A  R  S  L  R  D  Y  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_12058  275  CCATGTATTACTGTGCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  364
V  99.0% (287/290)  IGHV5-51*03  275  ....................----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  8    -----------------------------......-------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    -------------------------------------------....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_153194

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         333     1e-93
IGHD3-9*01                                                                                            14.1    9.3  
IGHJ2*01                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGACCGATAC	TGACTGG	GGTGGTCACACAGGGCTCTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACCGATACTGACTGGGGTGGTCACACAGGGCTCTTCTGGTACTTCGATCTC	AKTDTDWGGHTGLFWYFDL	264	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	77	27	25	2	0	92.6
FR2-IMGT	78	128	51	49	2	0	96.1
CDR2-IMGT	129	149	21	14	7	0	66.7
FR3-IMGT	150	263	114	101	13	0	88.6
CDR3-IMGT (germline)	264	267	4	4	0	0	100
Total	N/A	N/A	267	240	27	0	89.9


Alignments

                                        <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                           G  L  V  K  P  S  E  T  L  S  L  T  C  V  V  S  G  Y  S  I  N  N  G  Y  Y  W  G  W  L  
                    Query_12059    1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCGTTGTGTCTGGTTACTCCATCAACAATGGTTACTACTGGGGCTGGCTCC  90
V  89.9% (240/267)  IGHV4-38-2*01  26   ................T.........................C...C................G..G...................A...  115
                                           G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  

                                        --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                        R  Q  P  P  G  K  G  L  E  W  I  G  S  V  Y  H  R  G  D  A  Y  Y  N  P  S  L  K  S  R  V  
                    Query_12059    91   GGCAGCCCCCAGGAAAGGGGCTGGAGTGGATTGGGAGTGTCTATCATCGCGGGGACGCGTACTACAATCCGTCCCTCAAGAGTCGAGTCA  180
V  89.9% (240/267)  IGHV4-38-2*01  116  .............G........................A........A.T...AG.A.C........C......................  205
                                        R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  

                                        ----------------------FR3-IMGT----------------------------------------------------><------
                                        T  V  S  M  D  T  S  S  N  Q  V  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  
                    Query_12059    181  CCGTCTCAATGGACACGTCCAGTAATCAGGTCTCCCTGAGCCTGAGGTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAAGA  270
V  89.9% (240/267)  IGHV4-38-2*01  206  ..A.A...G.A..........AG..C...T.........AG.....C...............................A........---  292
                                        T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A     

                                        -----------------CDR3-IMGT----------------------->                                  
                                        T  D  T  D  W  G  G  H  T  G  L  F  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_12059    271  CCGATACTGACTGGGGTGGTCACACAGGGCTCTTCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  354
D  100.0% (7/7)     IGHD3-9*01     15   -------.......----------------------------------------------------------------------  21
J  100.0% (50/50)   IGHJ2*01       4    ----------------------------------..................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_153195

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            353     9e-100
IGHD2-2*01                                                                                            16.1    2.2   
IGHJ5*01                                                                                              62.2    6e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGG	GTAGTAGT	TCGTCGATTTGGTC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGTAGTAGTTCGTCGATTTGGTCCTGGTTCGACTTT	AKGSSSSIWSWFDF	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	235	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12060  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  96.3% (235/244)  IGHV4-4*01   49   ..........................................................................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  K  I  Y  H  S  G  N  T  N  Y  N  P  S  L  E  S  R  A  T  V  S  V  D  K  S  K 
                    Query_12060  91   GAGTGGATTGGAAAAATCTATCATAGTGGGAACACCAACTACAACCCGTCCCTCGAGAGTCGAGCCACCGTATCAGTAGACAAGTCCAAG  180
V  96.3% (235/244)  IGHV4-4*01   139  ...........GG..................G......................A.........T....A....................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  G  S  S  S  S  I  W  S 
                    Query_12060  181  AACCAGTTCTCCCTGAAACTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAAGGGTAGTAGTTCGTCGATTTGGTCC  270
V  96.3% (235/244)  IGHV4-4*01   229  .................G.....C...............................G........--------------------------  292
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  100.0% (8/8)     IGHD2-2*01   9    -------------------------------------------------------------------........---------------  16
J  89.4% (42/47)    IGHJ5*01     5    -----------------------------------------------------------------------------------------.  5

                                      ----------->                                  
                                       W  F  D  F  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_12060  271  TGGTTCGACTTTTGGGGCCAGGGAATCCTGGTCACTGTCTCCTCAG  316
J  89.4% (42/47)    IGHJ5*01     6    ..........CC........A....C.........C..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_153193

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           347     7e-98
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGAGA	TCGGGGA	AG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGAGATCGGGGAAGACTACTTTAACTAC	ARAEIGEDYFNY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  N  W  I  R  Q  L  P  G  K  G 
                    Query_12061  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAACTGGATCCGCCAGCTCCCAGGGAAGGGC  90
V  94.4% (236/250)  IGHV4-31*03  49   .............................................................G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  N  Y  Y  S  G  S  S  Y  F  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_12061  91   CTGGAGTGGATTGGCTACAACTATTATAGTGGGAGCTCCTACTTCAACCCGTCCCTCAAAAGTCGAGTTACCATATCATTAGACACGTCT  180
V  94.4% (236/250)  IGHV4-31*03  139  ..............G....T......C.........A......A...............G..................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  Q  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  E  I  G  E  D  Y 
                    Query_12061  181  AAGAACCAGTTCTCCCTGCAGCTCAACTCTGTGACTGCCGCGGACTCGGCCGTTTATTACTGTGCGAGAGCCGAGATCGGGGAAGACTAC  270
V  94.4% (236/250)  IGHV4-31*03  229  ..................A....G.G...................A.......G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-10*01  14   ----------------------------------------------------------------------------.......-------  20
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  N  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12061  271  TTTAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    ...G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_153190

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           442     2e-126
IGHD3-22*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              108     9e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCCGT	TGGTTAT	AATTCCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTC	ARAVGYNSDYYYGMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	286	3	0	99


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_12062  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAACCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  99.0% (286/289)  IGHV5-51*01  6    .................................G........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_12062  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGACC  180
V  99.0% (286/289)  IGHV5-51*01  96   .......................................................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  A  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12062  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGGCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  99.0% (286/289)  IGHV5-51*01  186  .....................................T....................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        M  Y  Y  C  A  R  A  V  G  Y  N  S  D  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_12062  271  CATGTATTACTGTGCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  99.0% (286/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-22*01  19   ------------------------.......-----------------------------------------------------------  25
J  100.0% (56/56)   IGHJ6*02     7    --------------------------------------....................................................  58

                                          
                                        S 
                    Query_12062  361  CTCA  364
J  100.0% (56/56)   IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_153191

Length=310
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           344     5e-97
IGHD7-27*01                                                                                           12.2    29   
IGHJ1*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD7-27*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CC	CTGGGG	N/A	GCACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCTGGGGGCAC	ARPWGH	237	254	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	23	1	0	95.8
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	112	2	0	98.2
CDR3-IMGT (germline)	237	242	6	6	0	0	100
Total	N/A	N/A	230	225	5	0	97.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  
                    Query_12063  13   GTGCAGCCTCTGGATTCACCTTCAGTGACTATTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTA  102
V  97.8% (225/230)  IGHV3-11*01  65   ...............................C..........................................................  154
                                         A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  T  S  G  S  T  K  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_12063  103  GTACTAGTGGTAGTACCAAACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTATCTGC  192
V  97.8% (225/230)  IGHV3-11*01  155  ...G..............T.T.....................................................................  244
                                      S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----CDR3-IMGT--->                            
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  W  G  H  W  G  Q  G  T  L  V  T  V  
                    Query_12063  193  AAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGACCCTGGGGGCACTGGGGCCAGGGCACCCTGGTCACTGTCT  282
V  97.8% (225/230)  IGHV3-11*01  245  ........................................C.........----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (6/6)     IGHD7-27*01  5    ----------------------------------------------------......--------------------------------  10
J  97.4% (37/38)    IGHJ1*01     15   ----------------------------------------------------------...........................C....  46

                                            
                                      S  S  
                    Query_12063  283  CCTCAG  288
J  97.4% (37/38)    IGHJ1*01     47   ......  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 29882253


Query= Query_112559

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            344     6e-97
IGHD1-1*01                                                                                            10.3    120  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	CGGGCGGACGA	GGTAC	TCA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATCGGGCGGACGAGGTACTCAACTTCTACGGTATGGACGTC	AKDRADEVLNFYGMDV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	24	0	0	100
FR2-IMGT	51	101	51	51	0	0	100
CDR2-IMGT	102	125	24	21	3	0	87.5
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	248	9	9	0	0	100
Total	N/A	N/A	234	227	7	0	97


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 
                    Query_12064  15   TGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATT  104
V  97.0% (227/234)  IGHV3-9*01   64   ..........................................................................................  153
                                       C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       K  W  N  S  G  S  V  R  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_12064  105  AAGTGGAATAGTGGTAGCGTACGCTATGCGGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCAAGAACTCCCTGTATCTA  194
V  97.0% (227/234)  IGHV3-9*01   154  .GT...............A..G.........................A.........................................G  243
                                       S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  R  A  D  E  V  L  N  F  Y  G  M  D 
                    Query_12064  195  CAAATGAATAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAAAGATCGGGCGGACGAGGTACTCAACTTCTACGGTATGGAC  284
V  97.0% (227/234)  IGHV3-9*01   244  ........C.............................................------------------------------------  297
                                       Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                                     
D  100.0% (5/5)     IGHD1-1*01   1    -----------------------------------------------------------------.....--------------------  5
J  96.2% (51/53)    IGHJ6*02     10   -------------------------------------------------------------------------...A.............  26

                                      -->                                 
                                       V  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_12064  285  GTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTCA  320
J  96.2% (51/53)    IGHJ6*02     27   ...................C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_112551

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCTACGAGGCGAGTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATATCTACGAGGCGAGTCATCAATATAGTGGCTACATGATTAATGACTAT	GKDIYEASHQYSGYMINDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12065  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGATATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-23*01  47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  G  I  S  E  S  G  G  S  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12065  91   ATTGGGTCTCAGGCATTAGTGAAAGTGGTGGTAGCACAAACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  94.8% (237/250)  IGHV3-23*01  137  .G..........CT.......GT...............T...............................................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  I  S  L  R  A  E  D  T  A  V  Y  Y  C  G  K  D  I  Y  E  A  S  H  
                    Query_12065  181  AGAACACCCTGTATCTACAAATGATCAGCCTCAGAGCCGAGGACACGGCCGTATATTACTGTGGGAAAGATATCTACGAGGCGAGTCATC  270
V  94.8% (237/250)  IGHV3-23*01  227  .......G........G.......A......G...............................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_12065  271  AATATAGTGGCTACATGATTAATGACTATTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  95.1% (39/41)    IGHJ4*02     8    ----------------------......C......................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_112552

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            318     6e-89
IGHD3-3*02                                                                                            12.2    31   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTT	GCATTT	CGATCTCCCACGAGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGCATTTCGATCTCCCACGAGGCATGGACGTC	ARLHFDLPRGMDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  T  V  S  G  G  S  I  T  S  T  Y  W  W  N  W  V  R  Q  P  P  G  K  G  
                    Query_12066  1    GGTCCCTGAGACTCTCCTGCACTGTGTCTGGGGGCTCCATCACCAGTACTTACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGAC  90
V  91.1% (225/247)  IGHV4-4*01   47   ..A.....TCC...A.....G....C.....T..........G.....G.A.........G...........................G.  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  S  G  S  P  H  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  K  S  
                    Query_12066  91   TGGAGTGGATTGGGGAAATCTATCATAGTGGGAGTCCCCACTACAGTCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCA  180
V  91.1% (225/247)  IGHV4-4*01   137  ..................................CA..A......AC...........................................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  W  C  A  R  L  H  F  D  L  P  R  
                    Query_12066  181  AGAACCAGTTCTCCCTGAAGTTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTGGTGTGCGAGGTTGCATTTCGATCTCCCACGAG  270
V  91.1% (225/247)  IGHV4-4*01   227  ....................C....C.............................T..C........-----------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                          
D  100.0% (6/6)     IGHD3-3*02   7    ----------------------------------------------------------------------......--------------  12

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  A  I  V  S  S 
                    Query_12066  271  GCATGGACGTCTGGGGCCAAGGGACCACGGCCATCGTCTCCTCA  314
J  95.2% (40/42)    IGHJ6*02     21   --............................T..C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_112555

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12067  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_12067  91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_12067  181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12067  271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_112554

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           308     4e-86
IGHD3-9*01                                                                                            44.9    5e-09
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGACTTCA	TACGATATTTTGACTGGTTATTA	ACAGGTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGACTTCATACGATATTTTGACTGGTTATTAACAGGTCTTGACTTT	ARGDFIRYFDWLLTGLDF	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	221	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  K  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12068  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCGTTCAAAGGTTACTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAA  90
V  90.2% (221/245)  IGHV4-34*01  49   ...................................C....GT.......A.....G.................................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  D  Y  N  G  E  T  D  Y  S  P  S  L  K  S  R  V  S  I  S  V  D  T  T  K  N 
                    Query_12068  91   TGGATTGGGGAAATCGATTATAATGGAGAAACCGACTATAGTCCGTCCCTCAAGAGTCGAGTCAGCATATCAGTAGACACGACCAAGAAC  180
V  90.2% (221/245)  IGHV4-34*01  139  ...............A..C...G....AGC...A....C.AC......................C................T........  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  M  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  D  F  I  R  Y  F  D  W 
                    Query_12068  181  CAGTTCTCCCTGAAGATGACGTCTGTTAGCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGACTTCATACGATATTTTGACTGG  270
V  90.2% (221/245)  IGHV4-34*01  229  ...............C...GC.....G.C..................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (23/23)   IGHD3-9*01   5    -------------------------------------------------------------------------.................  21

                                      -------------------->                                  
                                       L  L  T  G  L  D  F  W  G  R  G  T  L  V  T  V  S  S  
                    Query_12068  271  TTATTAACAGGTCTTGACTTTTGGGGCCGGGGAACCCTGGTCACTGTCTCCTCAG  325
D  100.0% (23/23)   IGHD3-9*01   22   ......-------------------------------------------------  27
J  90.5% (38/42)    IGHJ4*02     7    -------------......AC.......A...............C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_112556

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            325     3e-91
IGHD1-26*01                                                                                           12.2    31   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGTTTC	TATAGT	CGCGTTGGCTGCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTTTCTATAGTCGCGTTGGCTGCTTCTTTGACTAC	ARCFYSRVGCFFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  E  F  T  F  S  T  Y  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12069  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGAATTCACCTTTAGTACCTACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (228/248)  IGHV3-7*01   47   .....................C........G..............G...T.GG.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  R  H  D  E  T  V  K  T  Y  V  D  S  V  K  G  R  F  T  T  S  R  D  N  A  
                    Query_12069  91   AGTGGGTGGCAAACATAAGGCACGATGAAACTGTGAAAACCTATGTGGACTCTGTGAAGGGCCGATTCACCACGTCCAGAGACAACGCCA  180
V  91.9% (228/248)  IGHV3-7*01   137  ..........C.......A...A....G..G..A....TA................................TC................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  C  F  Y  S  R  V  G  
                    Query_12069  181  AGAACTCACTGTATCTGCAAATGGATAGCCTGAGACCTGAGGACACGGCTGTGTATTACTGTGCGAGATGTTTCTATAGTCGCGTTGGCT  270
V  91.9% (228/248)  IGHV3-7*01   227  .......................A.C.........G.C..............................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------......----------  8

                                      ------------->                                  
                                      C  F  F  D  Y  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_12069  271  GCTTCTTTGACTACTGGGGCCAGGGAGTGTTGGTCACCGTCTCCTCAG  318
J  90.9% (40/44)    IGHJ4*02     5    ----......................ACCC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_128823

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           357     1e-100
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGGTCC	ATTACTATGATAGTA	CTTCTTACTACGGGAGTCGGTTCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGGTCCATTACTATGATAGTACTTCTTACTACGGGAGTCGGTTCCACTTTGACTAC	ARVVHYYDSTSYYGSRFHFDY	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G 
                    Query_12070  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGA  90
V  96.0% (238/248)  IGHV4-61*01  49   .........................................C........................A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  N  T  N  H  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_12070  91   CTGGAGTGGATTGGGTACATCTATTACAGAGGGAACACCAACCACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTGGACACGTCC  180
V  96.0% (238/248)  IGHV4-61*01  139  .................T...........T....G.......T...............................A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  V  H  Y  Y  D  S 
                    Query_12070  181  AAGAACCAGTTCTCCCTGCAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGGTGGTCCATTACTATGATAGT  270
V  96.0% (238/248)  IGHV4-61*01  229  ..................A..C..............................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (15/15)   IGHD3-22*01  3    ----------------------------------------------------------------------------..............  16

                                      CDR3-IMGT-------------------------->                                  
                                       T  S  Y  Y  G  S  R  F  H  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_12070  271  ACTTCTTACTACGGGAGTCGGTTCCACTTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  340
D  100.0% (15/15)   IGHD3-22*01  17   .---------------------------------------------------------------------  17
J  97.8% (44/45)    IGHJ4*02     4    -------------------------.......................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_347782

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           339     2e-95
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TGTCTCCA	GACTACGGTGAC	GCT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTGTCTCCAGACTACGGTGACGCTTTTCACGAC	AKVSPDYGDAFHD	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12071  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTACCTTTAGCAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  93.6% (233/249)  IGHV3-23*01  47   ..................................C...........C......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  L  S  G  R  G  G  S  S  Y  Y  A  D  S  V  K  G  R  C  T  I  S  R  D  N  S  
                    Query_12071  91   AGTGGGTCTCACATTTGAGTGGTCGTGGTGGCAGTTCATACTACGCAGATTCCGTGAAGGGCCGGTGCACCATCTCCAGAGACAATTCCA  180
V  93.6% (233/249)  IGHV3-23*01  137  ...........GC.A.T......A.......T..CA.............C................T.......................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  K  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  V  S  P  D  Y  G  D  
                    Query_12071  181  AGAAGACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTTTATTACTGTGCGAAAGTGTCTCCAGACTACGGTGACG  270
V  93.6% (233/249)  IGHV3-23*01  227  ....C.............................................G.A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD4-17*01  2    -----------------------------------------------------------------------------............-  13

                                      ---------->                                  
                                      A  F  H  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12071  271  CTTTTCACGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  95.3% (41/43)    IGHJ4*02     6    --...G..T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_128825

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           353     9e-100
IGHD3-16*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAATC	TTGGGGGAG	CCGACCAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAATCTTGGGGGAGCCGACCAGATTGACTAC	ARVNLGGADQIDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  H  Y  W  S  W  M  R  Q  P  P  G  K  G 
                    Query_12072  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGGTAGTCACTACTGGAGCTGGATGCGGCAGCCCCCAGGGAAGGGA  90
V  95.2% (238/250)  IGHV4-61*01  49   .........................................C.........T................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  N  Y  E  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_12072  91   CTGGAGTGGATTGGGAATATCTATTATAGTGGGAGCACCAACTACGAACCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCC  180
V  95.2% (238/250)  IGHV4-61*01  139  ...............T..........C..................A.C..............................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  N  S  L  T  A  A  D  T  A  V  Y  F  C  A  R  V  N  L  G  G  A  D 
                    Query_12072  181  AAGAACCAGTTCTCCCTGAAACTGAACTCTTTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGTTAATCTTGGGGGAGCCGAC  270
V  95.2% (238/250)  IGHV4-61*01  229  ....................G....G....G...........................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  16   ----------------------------------------------------------------------------.........-----  24

                                      ----------->                                  
                                       Q  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12072  271  CAGATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (42/42)   IGHJ4*02     7    ----..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_71947

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           279     3e-77
IGHD6-19*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGC	GGTATAGTAGTGG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGCGGTATAGTAGTGGCTACTACTACGCTATGGTCGTC	ARPRYSSGYYYAMVV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	96	18	0	84.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	213	35	0	85.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  G  D  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12073  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCGGCGACTTTGGCATGCACTGGGTCCGCCAGGCCCCTGGCAAGGGGCTGG  90
V  85.9% (213/248)  IGHV3-30*03  47   ....................................C....A.TAG..A........................T..A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  G  A  I  S  Y  D  G  K  Y  K  F  Y  R  D  S  L  K  G  R  F  T  I  S  R  D  N  F  
                    Query_12073  91   AGTGGGTAGGAGCTATCTCATATGACGGCAAATATAAATTCTATAGAGACTCTCTGAAGGGCCGCTTCACCATCTCCAGAGACAACTTCG  180
V  85.9% (213/248)  IGHV3-30*03  137  .......G.C..T...A........T..A.GTA......A....GC......CG..........A....................T.C.A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  K  T  V  F  L  E  M  K  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  P  R  Y  S  S  G  Y  
                    Query_12073  181  AGAAGACAGTGTTTCTGGAAATGAAGAGTCTGAGACCTGAGGACACGGCTGTCTATTACTGTGCGAGACCGCGGTATAGTAGTGGCTACT  270
V  85.9% (213/248)  IGHV3-30*03  227  ....C..GC...A....C.......C..C......G................G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD6-19*01  2    ------------------------------------------------------------------------.......C.....-----  14
J  92.7% (51/55)    IGHJ6*02     8    -------------------------------------------------------------------------------------.....  12

                                      ---------------->                                 
                                      Y  Y  A  M  V  V  W  G  Q  G  T  P  V  P  V  S  S 
                    Query_12073  271  ACTACGCTATGGTCGTCTGGGGCCAAGGGACCCCGGTCCCCGTCTCCTCA  320
J  92.7% (51/55)    IGHJ6*02     13   ......G.....A...................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_71946

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD5-18*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	GTGGACACACCTATGG	AGCCCGAACCGACCCCCATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGGACACACCTATGGAGCCCGAACCGACCCCCATCTTGACTAC	ARRGHTYGARTDPHLDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  I  F  R  T  Y
                    Query_12074  1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACATCTTTAGAACCTA  90
V  95.9% (278/290)  IGHV5-51*01  6    ....................C.............................A..........................G.....CC.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_12074  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  95.9% (278/290)  IGHV5-51*01  96   ........G.................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  H  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  A
                    Query_12074  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACCACTCCATTAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACCCCGC  270
V  95.9% (278/290)  IGHV5-51*01  186  ..................................A.G.....C..........................................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  A  R  R  G  H  T  Y  G  A  R  T  D  P  H  L  D  Y  W  G  Q  G  T  L  V  S  V
                    Query_12074  271  CATATATTACTGTGCGAGACGTGGACACACCTATGGAGCCCGAACCGACCCCCATCTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGT  360
V  95.9% (278/290)  IGHV5-51*01  276  ...G................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  87.5% (14/16)    IGHD5-18*01  1    --------------------.....T...G......------------------------------------------------------  16
J  97.6% (41/42)    IGHJ4*02     7    --------------------------------------------------------.............................A....  40

                                              
                                        S  S  
                    Query_12074  361  CTCCTCAG  368
J  97.6% (41/42)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_71945

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-24*01                                                                                           428     3e-122
IGHD6-13*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-24*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAACA	ATAAGT	AGCAGCTGGTAC	ACCCGCTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACAATAAGTAGCAGCTGGTACACCCGCTATGACTAC	ATISSSWYTRYDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	281	7	0	97.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T  E  L 
                    Query_12075  2    CAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCCGGATACACCCTCACTGAATTA  91
V  97.6% (281/288)  IGHV1-24*01  7    ........A.................................................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T  E  L 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  I  Y  A  Q 
                    Query_12075  92   TCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGACCCTGAAGATGGAGAAACAATCTACGCTCAG  181
V  97.6% (281/288)  IGHV1-24*01  97   ...........................................................T...........T..............A...  186
                                       S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  I  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  D  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  D  D  T  A 
                    Query_12075  182  AAGTTCCAGGGCAGAGTCACCATGACCGACGACACATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGACGACACGGCC  271
V  97.6% (281/288)  IGHV1-24*01  187  .............................G..................................................G.........  276
                                       K  F  Q  G  R  V  T  M  T  E  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><--------------CDR3-IMGT-------------->                                  
                                       V  Y  Y  C  A  T  I  S  S  S  W  Y  T  R  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12075  272  GTGTATTACTGCGCAACAATAAGTAGCAGCTGGTACACCCGCTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  97.6% (281/288)  IGHV1-24*01  277  ...........T......-------------------------------------------------------------------  294
                                       V  Y  Y  C  A  T                                                                    
D  100.0% (12/12)   IGHD6-13*01  10   ------------------------............-------------------------------------------------  21
J  100.0% (41/41)   IGHJ4*02     8    --------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_71944

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           282     3e-78
IGHD3-10*01                                                                                           12.2    31   
IGHJ2*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGA	CGGGGA	TTGGAAG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGACGGGGATTGGAAGTTCGATCTC	ARHDGDWKFDL	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	98	16	0	86
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  D  S  I  I  S  S  R  F  F  W  G  W  L  R  Q  P  P  K  K  G  
                    Query_12076  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCATCAGTAGTCGTTTCTTCTGGGGCTGGCTCCGCCAGCCCCCAAAGAAGGGGC  93
V  86.0% (215/250)  IGHV4-39*01  50   .....TCC...A..................G........G.......A...A..A..........A..............GG........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  T  I  H  D  S  G  N  R  W  S  N  P  T  L  K  S  R  L  T  I  S  V  D  T  S  
                    Query_12076  94   TGGAGTGGATTGGGACTATCCATGACAGTGGGAACAGATGGTCCAACCCGACCCTCAAGAGTCGACTCACCATATCGGTGGACACGTCCA  183
V  86.0% (215/250)  IGHV4-39*01  140  ...............G....T..T.T.......G..CC.AC.A.......T..............G..........C..A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      M  N  Q  F  S  L  T  I  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  H  D  G  D  W  K  F  
                    Query_12076  184  TGAACCAGTTCTCCCTGACGATTTCCTCTATGACCGCCGCTGACACGGCTGTCTATTACTGTGCGAGACATGACGGGGATTGGAAGTTCG  273
V  86.0% (215/250)  IGHV4-39*01  230  A.................A.C.GAG....G..........A...........G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01  15   -------------------------------------------------------------------------......-----------  20
J  95.3% (41/43)    IGHJ2*01     11   --------------------------------------------------------------------------------------....  14

                                      ---->                                  
                                      D  L  W  G  R  G  S  Q  V  T  V  S  S  
                    Query_12076  274  ATCTCTGGGGCCGTGGCTCCCAGGTCACTGTCTCCTCAG  312
J  95.3% (41/43)    IGHJ2*01     15   .................A...T.................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_71943

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHD2-15*01                                                                                           21.8    0.039
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AAAGTCT	GATATTGTAGT	CCC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGTCTGATATTGTAGTCCCTATGGACGTC	AKSDIVVPMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12077  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACTTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.0% (227/244)  IGHV3-21*01  47   .............................................GC.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  V  G  T  Y  I  E  Y  A  S  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_12077  91   AGTGGGTCTCGTACATTTCTAGTGTTGGTACTTACATAGAGTACGCAAGCTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  93.0% (227/244)  IGHV3-21*01  137  ..........A.C....AG....AG.A...G.......T.C......GA......................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  S  D  I  V  V  P  M  
                    Query_12077  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGCAAAGTCTGATATTGTAGTCCCTATGG  270
V  93.0% (227/244)  IGHV3-21*01  227  .........................................................A......--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD2-15*01  3    -----------------------------------------------------------------------...........--------  13
J  100.0% (43/43)   IGHJ6*02     20   -------------------------------------------------------------------------------------.....  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12077  271  ACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  308
J  100.0% (43/43)   IGHJ6*02     25   ......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_71942

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GAGGG	AGTAGTGGTTATT	TTAGCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAGGGAGTAGTGGTTATTTTAGCCTC	ARRGSSGYFSL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  K  G  S  D  F  S  F  A  R  N
                    Query_12078  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGACTCTCTGAAGATCTCCTGTAAGGGTTCTGATTTCAGTTTTGCCAGGAA  90
V  94.8% (275/290)  IGHV5-51*01  6    ..........................................G............................GA.A...C...A....CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  H  D  S  D  T  R  Y  S  P
                    Query_12078  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTAGAGTGGATGGGGAACATCTATCCTCATGACTCTGATACCAGATACAGCCC  180
V  94.8% (275/290)  IGHV5-51*01  96   .......................................G.............T..........GG........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  T  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12078  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (275/290)  IGHV5-51*01  186  ...................................A.................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        M  Y  Y  C  A  R  R  G  S  S  G  Y  F  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12078  271  CATGTATTATTGTGCGAGACGAGGGAGTAGTGGTTATTTTAGCCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  94.8% (275/290)  IGHV5-51*01  276  .........C..........------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (13/13)   IGHD3-22*01  14   -------------------------.............------------------------------------------  26
J  100.0% (35/35)   IGHJ4*02     14   ---------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_71941

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12079  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_12079  91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_12079  181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_12079  271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_71940

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           346     2e-97
IGHD2-15*01                                                                                           14.1    9.7  
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGAG	GGCC	GGATATT	CCTCTGATGGACGTGAATATATGACCCCGCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGGGCCGGATATTCCTCTGATGGACGTGAATATATGACCCCGCTCTTTGACTTT	TRAGYSSDGREYMTPLFDF	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	64	5	0	92.8
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	287	254	33	0	88.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I  N  Y 
                    Query_12080  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGACGATCTCCTGCCAGGCATCCGGTTACAGTTTTATCAATTAC  91
V  88.5% (254/287)  IGHV1-18*04  7    .................................................A.G........A....T..T.......CC....C..GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  H  K  G  N  T  K  Y  A  Q 
                    Query_12080  92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAGGGCCTCGAGTGGATGGGATGGATCAGCGCGCACAAAGGTAACACAAAATATGCACAG  181
V  88.5% (254/287)  IGHV1-18*04  97   ........C.......................A..G..T.......................TT....T...........C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  Y  L  D  V  T  S  L  R  S  D  D  T  A 
                    Query_12080  182  AGTTTCCAGGGCAGAGTCACCATGACCACAGACACACTCACGGGCACAGCGTACCTGGACGTGACGAGTCTGCGATCTGACGACACGGCC  271
V  88.5% (254/287)  IGHV1-18*04  187  .AGC................................TC....A.......C...A....GC...G...C...A.................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  T  R  A  G  Y  S  S  D  G  R  E  Y  M  T  P  L  F  D  F  W  G  Q  G  T  P  V 
                    Query_12080  272  GTTTATTACTGTACGAGGGCCGGATATTCCTCTGATGGACGTGAATATATGACCCCGCTCTTTGACTTTTGGGGCCAGGGAACCCCGGTC  361
V  88.5% (254/287)  IGHV1-18*04  277  ..G.........G....-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  100.0% (7/7)     IGHD2-15*01  2    ---------------------.......--------------------------------------------------------------  8
J  90.9% (40/44)    IGHJ4*02     5    -----------------------------------------------------------........AC................T....  35

                                                   
                                       S  V  S  S  
                    Query_12080  362  TCCGTCTCCTCAG  374
J  90.9% (40/44)    IGHJ4*02     36   A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_259829

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            410     1e-116
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGTGAGGAACCAGCTCGTATCCGACTTC	ARAVRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  S  Y
                    Query_12081  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCAGCAGTTA  90
V  95.2% (276/290)  IGHV1-8*01   6    ..................G................................................................C......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  E
                    Query_12081  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCAGA  180
V  95.2% (276/290)  IGHV1-8*01   96   ........A.........................................................C.....................C.  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  G  D  T  S  I  T  T  A  Y  M  E  M  S  S  L  N  S  E  D  T  A
                    Query_12081  181  GAAGTTCCAGGGCAGAGTCACCATGACCGGGGACACTTCCATAACCACAGCCTACATGGAGATGAGCAGCCTAAACTCTGAAGACACGGC  270
V  95.2% (276/290)  IGHV1-8*01   186  ............................A..A....C.......G................C..........G.GA.....G........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  R  A  V  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12081  271  CGTGTATTACTGTGCGAGAGCGGTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.2% (276/290)  IGHV1-8*01   276  ....................---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01   9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_259828

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         389     2e-110
IGHD6-19*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCTTAAGGTCAATCGCGTC	CAGTGGC	CGGGCGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCCGGGCGTCA	ARHPLRSIASSGRAS	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	77	72	67	5	0	93.1
CDR1-IMGT	78	101	24	22	2	0	91.7
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	103	11	0	90.4
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	291	270	21	0	92.8


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  T  F  T  N 
                    Query_12082    6    GTGCAGCTGGTGCAGTCTGGAGGAGAGGTGAAGAAGCCCGGGGAGTCTTTGAGGATTTCCTGTAAGGCTTCTGGATACACCTTTACCAAC  95
V  92.8% (270/291)  IGHV5-10-1*01  4    ......................C.........A...............C.......C..........G...........G........G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  W  I  S  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  S  Y  S 
                    Query_12082    96   TACTGGATCAGCTGGGTGCGTCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGACCCTAGTGACTCTTATACCAGCTACAGT  185
V  92.8% (270/291)  IGHV5-10-1*01  94   ....................C...A.....................................T...................A......C  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  D  G  N  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  M  A  S  D  T 
                    Query_12082    186  CCGTCCTTCGACGGCAACGTCACCATCTCAGTTGACAAGTCCATCAGTACTGCCTATTTGCAGTGGAGCAGCCTGATGGCCTCGGACACC  275
V  92.8% (270/291)  IGHV5-10-1*01  184  .........C.A...C...............C...............C........CC..................A.............  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><-----------------CDR3-IMGT----------------->                              
                                         A  M  Y  Y  C  A  R  H  P  L  R  S  I  A  S  S  G  R  A  S  W  G  Q  G  T  L  V  T  V  S 
                    Query_12082    276  GCCATGTATTATTGTGCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCCGGGCGTCATGGGGCCAGGGAACCCTGGTCACCGTCTCC  365
V  92.8% (270/291)  IGHV5-10-1*01  274  ...........C.........---------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                      
D  100.0% (7/7)     IGHD6-19*01    9    --------------------------------------------.......---------------------------------------  15
J  100.0% (34/34)   IGHJ4*02       15   ------------------------------------------------------------..............................  44

                                            
                                         S  
                    Query_12082    366  TCAG  369
J  100.0% (34/34)   IGHJ4*02       45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_71949

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           276     3e-76
IGHD7-27*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD7-27*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGACAAGGGG	ACTGGGGA	N/A	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAAGGGGACTGGGGATGGTACTTCGATCTC	ARRQGDWGWYFDL	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	60	33	26	4	3	78.8
FR2-IMGT	61	111	51	44	7	0	86.3
CDR2-IMGT	112	129	21	12	6	3	57.1
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	252	218	28	6	86.5


Alignments

                                      <--------FR1-IMGT---------><-----------CDR1-IMGT-----------><--------------------FR2-IMGT-
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  S  A  G  H  Y  W  S  W  I  R  Q  T  P  G  K 
                    Query_12083  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGCAGTGCTGGTCACTATTGGAGTTGGATCCGCCAGACCCCCGGAAAG  90
V  86.5% (218/252)  IGHV4-31*03  49   ...............................G............---..G....T....C.....C............CA...A..G...  135
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S     G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K 

                                      --------------------><-----CDR2-IMGT-----><-----------------------------------------------
                                       G  L  E  W  M  G  Y  I  F  Y  T  V     P  Y  Y  N  P  S  L  K  S  R  L  T  M  S  G  D  T 
                    Query_12083  91   GGCCTGGAGTGGATGGGTTACATCTTTTATACTGTGC---CATACTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCAGGAGACACC  177
V  86.5% (218/252)  IGHV4-31*03  136  ..............T..G.......A...C.G..G.AGCA.C..............C............G.T.....A....T......G  225
                                       G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T 

                                      -----FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT
                                       A  K  N  Q  F  S  L  R  L  T  S  V  T  S  A  D  T  A  V  Y  Y  C  A  R  R  Q  G  D  W  G 
                    Query_12083  178  GCTAAGAACCAGTTTTCCCTGAGGCTGACCTCTGTGACTTCCGCGGACACGGCCGTGTATTACTGTGCGAGACGACAAGGGGACTGGGGA  267
V  86.5% (218/252)  IGHV4-31*03  226  T.............C.......A.....G..........G................................------------------  297
                                       S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                   
D  100.0% (8/8)     IGHD7-27*01  4    ----------------------------------------------------------------------------------........  11

                                      -------------->                                  
                                       W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_12083  268  TGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  316
J  100.0% (49/49)   IGHJ2*01     5    .................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_71948

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         346     2e-97
IGHD5-12*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGAGGAT	TGGCTACGA	GACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGACCCCCTTTGACCTC	ARAGRIGYETPFDL	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  T  V  S  G  Y  P  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_12084    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTACCCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  94.7% (234/247)  IGHV4-38-2*02  49   .................................T..............T.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K 
                    Query_12084    91   GAGTGGATTGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAG  180
V  94.7% (234/247)  IGHV4-38-2*02  139  ......................A.........C.........A..............A........................C.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  Q  F  S  L  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  T 
                    Query_12084    181  AACCAGTTCTCGTTGAATCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGAGCGGGGAGGATTGGCTACGAGACC  270
V  94.7% (234/247)  IGHV4-38-2*02  229  ...........CC....G....G...........C...............G................-----------------------  295
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD5-12*01    11   -----------------------------------------------------------------------------.........----  19

                                        ----------->                                  
                                         P  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12084    271  CCCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.5% (42/44)    IGHJ4*02       5    --.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_128828

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           327     9e-92
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCGCCGGGACG	GTGGTAATTAC	CCTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCGCCGGGACGGTGGTAATTACCCTATTGACTAC	ARPRRDGGNYPIDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  T  D  G  Y  Y  W  S  W  I  R  Q  F  P  G  K  G 
                    Query_12085  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGAACTGATGGTTACTACTGGAGCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  92.0% (229/249)  IGHV4-31*03  49   .........................................C.G..G............................CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  Y  H  T  G  S  T  Y  Y  T  P  S  V  R  G  R  V  T  M  S  V  D  T  S 
                    Query_12085  91   CTGGAGTGGATTGGGTTCATCTATCACACTGGGAGCACCTACTACACCCCGTCCGTCCGGGGTCGAGTCACCATGTCAGTGGACACGTCT  180
V  92.0% (229/249)  IGHV4-31*03  139  ................A.......T...G.................A.......C..AA.A.......T.....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  A  Y  Y  C  A  R  P  R  R  D  G  G  N 
                    Query_12085  181  AAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACTGCCGCGGACACGGCCGCCTATTACTGTGCGAGACCTCGCCGGGACGGTGGTAAT  270
V  92.0% (229/249)  IGHV4-31*03  229  ...................A.....G..........................TG...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD3-22*01  18   ----------------------------------------------------------------------------------.....T..  25

                                      -------------->                                  
                                       Y  P  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12085  271  TACCCTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTTTCCTCAG  319
D  90.9% (10/11)    IGHD3-22*01  26   ...----------------------------------------------  28
J  97.6% (41/42)    IGHJ4*02     7    -------..................................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_79729

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD5-18*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATAGTC	ATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATAGTCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	240	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12086  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.8% (240/243)  IGHV4-59*01  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  N  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12086  91   TGGATTGGGTATATCTACAACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (240/243)  IGHV4-59*01  139  .................TT.......................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D 
                    Query_12086  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATATAGTCATGGTTACGGAGGAGTTGAC  270
V  98.8% (240/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD5-18*01  13   ----------------------------------------------------------------------........------------  20
J  92.9% (39/42)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  F  P  V  S  S  
                    Query_12086  271  TACTGGGGCCAGGGAACCCTTTTCCCCGTCTCCTCAG  307
J  92.9% (39/42)    IGHJ4*02     12   ....................GG..A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_79728

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           322     2e-90
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	GTCGCTCTCT	GTATAGTGGGACCTA	GTTGCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCGCTCTCTGTATAGTGGGACCTAGTTGCAACTAC	VALCIVGPSCNY	249	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	24	6	0	80
FR3-IMGT	135	248	114	104	10	0	91.2
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  E  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12087  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACGAGGGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.5% (227/248)  IGHV3-15*01  47   .......T........................................CCT.......C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  R  K  F  E  G  E  T  T  D  Y  P  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_12087  91   AGTGGGTTGGCCGTATTAAAAGGAAGTTTGAAGGTGAGACAACAGACTACCCTGCACCCGTAAAAGGCAGATTCACCATCTCAAGAGATG  180
V  91.5% (227/248)  IGHV3-15*01  137  ......................C..AAC...T....G.............G..........G............................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------CDR3-IMG
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  M  T  E  D  T  A  I  Y  Y  C  V  A  L  C  I  V  G  
                    Query_12087  181  ATTCAAAAAACACGCTGTATTTGCAAATGAACAGCCTGATGACCGAGGACACTGCCATATACTATTGTGTCGCTCTCTGTATAGTGGGAC  270
V  91.5% (227/248)  IGHV3-15*01  227  ....................C..................AA...........A...G.G..T..C...----------------------  294
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  93.3% (14/15)    IGHD1-26*01  2    ------------------------------------------------------------------------------...........G  13

                                      T------------>                                  
                                      P  S  C  N  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_12087  271  CTAGTTGCAACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  318
D  93.3% (14/15)    IGHD1-26*01  14   ...---------------------------------------------  16
J  97.4% (38/39)    IGHJ4*02     10   ---------.................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_128829

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           400     9e-114
IGHD5-12*01                                                                                           18.0    0.65  
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGGGC	AGTGGCTAC	TACGGGGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGCAGTGGCTACTACGGGGGTGCTTTTGATATC	ARMGSGYYGGAFDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	272	16	0	94.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  S  H 
                    Query_12088  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGTCAT  91
V  94.4% (272/288)  IGHV1-18*01  7    .................................................A....................................CT..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  L  A  P  G  Q  G  L  E  W  M  G  Y  I  T  N  Y  N  N  N  T  D  Y  A  Q 
                    Query_12088  92   GGTATCAGCTGGGTGCGACTGGCCCCTGGACAAGGGCTTGAGTGGATGGGATACATCACCAATTACAATAATAACACAGACTATGCACAG  181
V  94.4% (272/288)  IGHV1-18*01  97   ...................A................................GG....G.GC.......GG.......A...........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  N  L  R  S  D  D  T  A 
                    Query_12088  182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAATCTGAGATCTGACGACACGGCC  271
V  94.4% (272/288)  IGHV1-18*01  187  ...C...............................................................GC.....................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  F  Y  C  A  R  M  G  S  G  Y  Y  G  G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12088  272  GTGTTTTACTGTGCGAGAATGGGCAGTGGCTACTACGGGGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  359
V  94.4% (272/288)  IGHV1-18*01  277  ....A.............----------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (9/9)     IGHD5-12*01  9    ------------------------.........-------------------------------------------------------  17
J  100.0% (47/47)   IGHJ3*02     4    -----------------------------------------...............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_79723

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     5e-87
IGHD3-22*01                                                                                           31.5    6e-05
IGHJ4*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTCCCAGGGTGACCTAC	TACTATGATAATACTGGTTATT	TTTCCCCATACCC	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTCCCAGGGTGACCTACTACTATGATAATACTGGTTATTTTTCCCCATACCCCTTCGACTAC	ARSPRVTYYYDNTGYFSPYPFDY	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  V  R  Q  S  P  G  K  G  L  Q 
                    Query_12089  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTATTACTGGAGCTGGGTCCGGCAGTCCCCAGGGAAGGGACTGCAG  90
V  90.9% (221/243)  IGHV4-59*01  49   ........................................G......C............A........C.................G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  V  Y  Y  L  G  T  T  N  Y  N  P  S  L  Q  N  R  V  T  I  S  V  D  T  Y  E  N 
                    Query_12089  91   TGGGTTGGCTATGTCTATTACCTTGGGACCACCAACTACAACCCCTCCCTACAGAATCGAGTCACCATTTCAGTTGACACGTACGAGAAC  180
V  90.9% (221/243)  IGHV4-59*01  139  ...A....G...A........AG.....G.....................CA...G............A.....A.......C.A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  F  S  L  N  L  A  A  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  R  V  T  Y  Y  Y  D 
                    Query_12089  181  CAGTTCTCCCTGAACCTGGCCGCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAAGTCCCAGGGTGACCTACTACTATGAT  270
V  90.9% (221/243)  IGHV4-59*01  229  ..............G...AG.T.........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.9% (20/22)    IGHD3-22*01  5    ---------------------------------------------------------------------------------.........  13

                                      3-IMGT----------------------------->                                  
                                       N  T  G  Y  F  S  P  Y  P  F  D  Y  W  G  H  G  I  L  V  T  V  S  S  
                    Query_12089  271  AATACTGGTTATTTTTCCCCATACCCCTTCGACTACTGGGGCCACGGAATCCTGGTCACCGTCTCCTCAG  340
D  90.9% (20/22)    IGHD3-22*01  14   .G..G........---------------------------------------------------------  26
J  93.2% (41/44)    IGHJ4*01     5    --------------------------...T..............A....C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_79722

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           254     1e-69
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	91	23	0	79.8
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	203	41	0	83.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_12090  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  83.2% (203/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  Y  Y  I  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  Y 
                    Query_12090  91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCTACTACATCCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGTAT  180
V  83.2% (203/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A......A.......C...A......A......A.A....T.....C...C.A.A.C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_12090  181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACGTAT  270
V  83.2% (203/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  P  V  S  S  
                    Query_12090  271  GTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCCCCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  90.7% (39/43)    IGHJ3*01     8    ---------------------------------...G....................AT....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_79721

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD3-3*02                                                                                            16.1    2.2  
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	TTGGCCCCCCGTGCCCCAT	TTAGCATT	GCCTGCCACG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGTTGGCCCCCCGTGCCCCATTTAGCATTGCCTGCCACGGACTAC	ASWPPVPHLALPATDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	242	5	4	1	0	80
Total	N/A	N/A	242	221	21	0	91.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  R  N  Y  W  S  W  I  R  Q  P  Q  G  T  G  L  E 
                    Query_12091  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTAGGAACTACTGGAGCTGGATCCGGCAGCCCCAAGGGACGGGACTGGAG  90
V  91.3% (221/242)  IGHV4-59*01  49   ......................................C.....TT...........................C.....A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  T  I  P  P  L  K  S  R  V  I  I  S  V  A  T  S  M  I 
                    Query_12091  91   TGGATAGGGTATATCTATTACAGTGGGAGCACCAACACCATCCCCCCCCTCAAGAGTCGAGTCATCATATCAGTAGCCACGTCCATGATC  180
V  91.3% (221/242)  IGHV4-59*01  139  .....T..............................TA..A....T..................C...........A........A..A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       K  F  S  L  N  M  S  S  V  T  A  A  D  T  A  L  C  Y  C  A  S  W  P  P  V  P  H  L  A  L 
                    Query_12091  181  AAGTTCTCCCTGAATATGAGCTCTGTGACCGCTGCGGACACGGCCTTGTGTTATTGTGCAAGTTGGCCCCCCGTGCCCCATTTAGCATTG  270
V  91.3% (221/242)  IGHV4-59*01  229  C.............GC.............................G...A...C.....G..----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (8/8)     IGHD3-3*02   4    ---------------------------------------------------------------------------------........-  11

                                      -------------->                                 
                                       P  A  T  D  Y  G  G  Q  G  T  L  V  I  F  S  S 
                    Query_12091  271  CCTGCCACGGACTACGGGGGCCAGGGAACCCTGGTCATCTTCTCCTCA  318
J  92.3% (36/39)    IGHJ4*02     9    ---------......T.....................C.G........  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_79726

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         391     6e-111
IGHD6-13*01                                                                                           14.1    9.3   
IGHJ5*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCATGACGCCCTG	GCAGTAGCTG	N/A	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATGACGCCCTGGCAGTAGCTGGGTTCGACCCC	ARHDALAVAGFDP	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	269	19	0	93.4


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  P  C  K  G  S  G  Y  S  F  P  T  Y
                    Query_12092    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCCCCTGTAAGGGTTCTGGATACAGCTTTCCCACCTA  90
V  93.4% (269/288)  IGHV5-10-1*01  6    .......................................................T..........................A...G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  V  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  K  V  D  P  S  G  S  Y  I  K  Y  S  P
                    Query_12092    91   CTGGGTCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAAAGTTGACCCTAGTGGCTCTTATATCAAGTACAGTCC  180
V  93.4% (269/288)  IGHV5-10-1*01  96   ....A................................................GGA....T.......A........C...C.....C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  V  V  D  K  S  I  N  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12092    181  GTCTTTCCAAGGCCACGTCACCATCGTAGTTGACAAGTCCATCAACACTGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (269/288)  IGHV5-10-1*01  186  ...C.....................TC..C..............G........A....................................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          M  Y  F  C  A  R  H  D  A  L  A  V  A  G  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12092    271  CATGTATTTCTGTGCGAGGCATGACGCCCTGGCAGTAGCTGGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  93.4% (269/288)  IGHV5-10-1*01  276  ........A.........--------------------------------------------------------------------  293
                                          M  Y  Y  C  A                                                                       
D  90.0% (9/10)     IGHD6-13*01    8    -------------------------------....C.....---------------------------------------------  17
J  100.0% (45/45)   IGHJ5*02       7    -----------------------------------------.............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_79725

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           339     1e-95
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	N/A	N/A	GGGGCCTGTG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGCCTGTGTACTTTGACCAC	AKGPVYFDH	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12093  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-23*01  47   ....................G....................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  I  G  G  G  D  I  T  Y  Y  A  D  S  V  N  G  R  F  T  I  S  R  D  N  S  
                    Query_12093  91   AGTGGGTCTCAAGTATTATTGGTGGTGGTGATATCACATACTATGCAGACTCCGTCAACGGCCGGTTCACCATCTCCAGAGACAATTCGA  180
V  93.9% (232/247)  IGHV3-23*01  137  ...........GC.....G....A......G..G.........C...........G..G.............................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  T  L  Y  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  P  V  Y  F  D  H  
                    Query_12093  181  AGAATACGCTTTATCTGCAAATGAACGGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGGGGCCTGTGTACTTTGACCACT  270
V  93.9% (232/247)  IGHV3-23*01  227  ....C.....G...............A........................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  91.3% (42/46)    IGHJ4*02     3    -----------------------------------------------------------------------------.........T...  15

                                                                       
                                      W  G  Q  G  R  L  V  T  V  S  S  
                    Query_12093  271  GGGGCCAGGGAAGGTTGGTCACCGTCTCCTCAG  303
J  91.3% (42/46)    IGHJ4*02     16   ............CCC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_190832

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           341     5e-96
IGHD3-3*01                                                                                            35.3    4e-06
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATGGTAAAAGA	GATTTTTGGAGTGGTTTTTAT	TTAGGGTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATGGTAAAAGAGATTTTTGGAGTGGTTTTTATTTAGGGTAT	ARNGKRDFWSGFYLGY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_12094  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGCAGTTATGGCATGTACTGGGTCCGGCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (233/248)  IGHV3-33*01  47   ...........................................T..C.........C..........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  M  A  V  I  W  N  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  N  
                    Query_12094  91   AGTGGATGGCAGTTATATGGAATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATAACA  180
V  94.0% (233/248)  IGHV3-33*01  137  .....G..............T..................................................A..............TC..  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  N  G  K  R  D  F  W  
                    Query_12094  181  AGAGCACGCTCTATCTGCAAATGGACAGTCTGAGGGCCGAGGACACGGCTGTGTATTATTGTGCGAGAAATGGTAAAAGAGATTTTTGGA  270
V  94.0% (233/248)  IGHV3-33*01  227  ...A......G............A....C.....A.......................C.........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.2% (20/21)    IGHD3-3*01   8    --------------------------------------------------------------------------------..........  17

                                      T------------------>                                  
                                      S  G  F  Y  L  G  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_12094  271  GTGGTTTTTATTTAGGGTATTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  324
D  95.2% (20/21)    IGHD3-3*01   18   ......A....-------------------------------------------  28
J  97.1% (33/34)    IGHJ4*02     15   --------------------............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_299932

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12095  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_12095  91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_12095  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12095  271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_41869

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           347     7e-98
IGHD3-16*01                                                                                           14.1    8.7  
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTCG	GTTTGCGGGA	CGATGTTGACGAAGACAGGGGGGTG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGACATGTCGGTTTGCGGGACGATGTTGACGAAGACAGGGGGGTG	TRHVGLRDDVDEDRGV	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	239	17	0	93.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  G  S  A  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_12096  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGGGGGTCCGCTATGCACTGGGTCCGCCAGGTTCCCGGGAAAGGACTGG  90
V  93.4% (239/256)  IGHV3-73*01  47   .........A.................................T..C..T......................C.T..........G....  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  N  K  A  N  N  Y  A  T  T  Y  S  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_12096  91   AGTGGGTTGGCCGTATAAGAAACAAAGCTAACAATTACGCGACAACATATTCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATG  180
V  93.4% (239/256)  IGHV3-73*01  137  ................T....G...........G..........G.....G.......................................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  K  N  M  A  F  L  Q  M  N  S  L  K  T  E  D  T  A  A  Y  Y  C  T  R  H  V  G  L  R  
                    Query_12096  181  ATTCAAAGAACATGGCGTTTCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGCTTATTACTGCACTAGACATGTCGGTTTGCGGG  270
V  93.4% (239/256)  IGHV3-73*01  227  ............C.....A......................................TG........T........--------------  302
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  90.0% (9/10)     IGHD3-16*01  14   ---------------------------------------------------------------------------------.....G...  22

                                      R3-IMGT------------------>                                  
                                      D  D  V  D  E  D  R  G  V  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_12096  271  ACGATGTTGACGAAGACAGGGGGGTGTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  330
D  90.0% (9/10)     IGHD3-16*01  23   .-----------------------------------------------------------  23
J  97.1% (33/34)    IGHJ4*02     15   --------------------------......................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_46898

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           330     1e-92
IGHD6-6*01                                                                                            23.8    0.010
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	TC	ATAGCAGCTCGT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACTCATAGCAGCTCGTACTACTATGAGTAC	TTHSSSYYYEY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	232	21	0	91.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  T  W  L  S  W  V  R  Q  D  P  E  K  G  L  
                    Query_12097  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACACCTGGCTGAGCTGGGTCCGCCAGGATCCAGAGAAGGGTCTGG  90
V  91.7% (232/253)  IGHV3-15*01  47   .......T.......................................G.....A..................C.....G......G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      A  W  V  G  R  I  K  S  E  T  H  G  G  T  T  D  Y  P  A  P  V  K  G  R  F  T  V  S  R  D  
                    Query_12097  91   CGTGGGTTGGCCGTATTAAAAGCGAGACTCATGGTGGGACAACAGACTACCCTGCACCCGTGAAAGGCAGATTCACCGTCTCTAGAGATG  180
V  91.7% (232/253)  IGHV3-15*01  137  A......................A.A...G....................G..........................A....A.......  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  D  T  L  Y  L  H  M  N  D  L  K  S  E  D  T  A  V  Y  Y  C  T  T  H  S  S  S  Y  
                    Query_12097  181  ATTCAAAAGACACACTATATCTGCACATGAACGACCTGAAAAGCGAGGACACAGCCGTGTATTACTGCACCACTCATAGCAGCTCGTACT  270
V  91.7% (232/253)  IGHV3-15*01  227  ........A....G..G........A......AG........C........................T.....-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (12/12)   IGHD6-6*01   5    ---------------------------------------------------------------------------............---  16
J  91.7% (44/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  Y  E  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_12097  271  ACTATGAGTACTGGGGTCAGGGAACCCGGGTCACCGTCTCCTCAG  315
J  91.7% (44/48)    IGHJ4*02     4    ...T...C........C..........T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_299937

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           330     1e-92
IGHD3-22*01                                                                                           12.2    31   
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCAT	CTATGA	CC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCATCTATGACCACTACTACGGCTTGGACGTC	ARVIYDHYYGLDV	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	24	18	3	3	75
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	249	232	14	3	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  S  Y  D  F  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12098  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTCAGTAGTTATGATTTCAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-48*03  47   .....................C..............................AA.G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  T     T  P  I  K  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_12098  91   AGTGGGTTTCATATATTAGTAGTACT---ACTCCCATAAAGTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  177
V  93.2% (232/249)  IGHV3-48*03  137  .............C..........G.GGT.G.A.....T.C................A................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  V  I  Y  D  H  Y  Y  
                    Query_12098  178  AGAACTCACTGCATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTTCTGTGCGAGAGTCATCTATGACCACTACTACG  267
V  93.2% (232/249)  IGHV3-48*03  227  ...........T........................................T....A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-22*01  7    -------------------------------------------------------------------------......-----------  12
J  94.3% (50/53)    IGHJ6*02     10   ---------------------------------------------------------------------------------.........  18

                                      ---------->                                 
                                      G  L  D  V  W  G  P  G  T  T  V  T  V  S  S 
                    Query_12098  268  GCTTGGACGTCTGGGGCCCAGGGACCACGGTCACCGTCTCCTCA  311
J  94.3% (50/53)    IGHJ6*02     19   .TA...............A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_82799

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           366     2e-103
IGHD3-3*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TGTCTAGGGGCACC	CGATTTTTGGAGTGG	CTGCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGTCTAGGGGCACCCGATTTTTGGAGTGGCTGCCCTTTGACTAC	ARLSRGTRFLEWLPFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  L  I  R  Q  P  P  G  K  G 
                    Query_12099  1    ACCCTGTCCCTCACCTGCACTGTCTCCGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTTGATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.8% (242/250)  IGHV4-39*01  49   ..........................T.....................................G.........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  V  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12099  91   CTGGAGTGGATTGGAAGTGTCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACCTCC  180
V  96.8% (242/250)  IGHV4-39*01  139  ..............G...A...................................................................G...  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  H  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  S  R  G  T  R  F 
                    Query_12099  181  AAGAACCATTTCTCCCTGAAGCTGCGCTCTGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACTGTCTAGGGGCACCCGATTT  270
V  96.8% (242/250)  IGHV4-39*01  229  ........G...............A............................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (15/15)   IGHD3-3*01   7    ------------------------------------------------------------------------------------......  12

                                      MGT-------------------->                                  
                                       L  E  W  L  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12099  271  TTGGAGTGGCTGCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  100.0% (15/15)   IGHD3-3*01   13   .........-------------------------------------------------  21
J  100.0% (44/44)   IGHJ4*02     5    --------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_299935

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           310     1e-86
IGHD2-15*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGT	GGATATTGTAGTGG	CTTTGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTGGATATTGTAGTGGCTTTGGTTGACTCC	AKDVDIVVALVDS	230	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	21	3	0	87.5
FR3-IMGT	116	229	114	107	7	0	93.9
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	211	13	0	94.2


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  S  G  S 
                    Query_12100  14   TCTGGATTCACCTTTAGCAATTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGGTATTAGTGGTAGT  103
V  94.2% (211/224)  IGHV3-23*01  73   ...................GC.......................................................C.............  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  L  T  T  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  Q  S  K  N  T  L  Y  L  Q  M  S 
                    Query_12100  104  GGTCTTACCACATACTACGCAGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACCAATCCAAGAACACCCTGTATCTGCAAATGAGC  193
V  94.2% (211/224)  IGHV3-23*01  163  ...GG..G......................A.......G..................A.T...........G................A.  252
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><--------------CDR3-IMGT-------------->               
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  V  D  I  V  V  A  L  V  D  S  W  G  Q  G  T 
                    Query_12100  194  AGCCTGAGGGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATGTGGATATTGTAGTGGCTTTGGTTGACTCCTGGGGCCAGGGAACC  283
V  94.2% (211/224)  IGHV3-23*01  253  ........A...................................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  100.0% (14/14)   IGHD2-15*01  2    -----------------------------------------------..............-----------------------------  15
J  97.6% (41/42)    IGHJ4*02     7    -------------------------------------------------------------------......A................  29

                                                         
                                       L  V  T  V  S  S  
                    Query_12100  284  CTGGTCACCGTCTCCTCAG  302
J  97.6% (41/42)    IGHJ4*02     30   ...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_299934

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHD3-9*01                                                                                            12.2    31    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGA	ATATTT	CCCACGAGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGACGAATATTTCCCACGAGGCTTTCAGTAC	VRDEYFPRGFQY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12101  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGGCTACTGGATGCACTGGGTCCGCCAAGCACCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-74*01  47   ............................................A............................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  I  I  D  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12101  91   TGTGGGTCTCACGTATTAATAGTGATGGGAGTATCATAGACTCCGCGGATTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-74*01  137  .................................G..C.AG..A......C........................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  E  Y  F  P  R  G  
                    Query_12101  181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGTAAGAGACGAATATTTCCCACGAGGCT  270
V  96.0% (240/250)  IGHV3-74*01  227  .......G.......................................................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-9*01   9    -------------------------------------------------------------------------......-----------  14
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  Q  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12101  271  TTCAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  95.5% (42/44)    IGHJ4*02     7    ..G.C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_41863

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           302     3e-84
IGHD6-13*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACTGG	GCAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACTGGGCAGCAGCTGACTGACTAC	ARDTGQQLTDY	276	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	275	147	109	5	33	74.1
CDR3-IMGT (germline)	276	283	8	8	0	0	100
Total	N/A	N/A	283	240	10	33	84.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12102  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  84.8% (240/283)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  D  S  P  R  Y  Y  A  D  S  V  K  G  R  F  T  Y  Y  A  D  S  V  
                    Query_12102  91   AGTGGGTCTCATCCATTAGTAGTAGTGATAGTCCCAGATATTACGCAGACTCAGTGAAGGGCCGATTCACCTATTATGCAGACTCAGTGA  180
V  84.8% (240/283)  IGHV3-21*01  137  ..........................AG....TA..T...C...---------------------------------.............  193
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y                                   A  D  S  V  

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                      K  G  R  F  T  I  S  R  D  D  A  K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  
                    Query_12102  181  AGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAATTCACTGTATCTACAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATT  270
V  84.8% (240/283)  IGHV3-21*01  194  ..........................A..........C...........G...................C....................  283
                                      K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-----------CDR3-IMGT----------->                                  
                                      Y  C  A  R  D  T  G  Q  Q  L  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12102  271  ACTGTGCGAGAGATACTGGGCAGCAGCTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
V  84.8% (240/283)  IGHV3-21*01  284  .............-----------------------------------------------------------  296
                                      Y  C  A  R                                                              
D  100.0% (10/10)   IGHD6-13*01  8    -------------------..........-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_41862

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           410     1e-116
IGHD1-26*01                                                                                           10.3    132   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_12103  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  95.2% (276/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  F  A  Q 
                    Query_12103  92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTTTGCACAG  181
V  95.2% (276/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_12103  182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_12103  272  ATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  95.2% (276/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_41861

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           315     5e-88
IGHD6-19*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGAACGGCTGTAT	CAGTGACTGG	CACCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGAACGGCTGTATCAGTGACTGGCACCCTTGACTAC	ARDRTAVSVTGTLDY	230	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	24	0	0	100
FR3-IMGT	116	229	114	109	5	0	95.6
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	213	12	0	94.7


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  N  Y  N  S  H  A  L  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_12104  13   GTCTGGATTCAACTACAATAGCCATGCCTTGCACTGGGTCCGCCAGGCTCCGGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  94.7% (213/225)  IGHV3-33*01  72   ...........C..T..G....T...G.A......................A......................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  E  D  S  V  R  G  R  F  S  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_12104  103  TGGAAGTAATAAATACTATGAAGACTCCGTGAGGGGCCGGTTCAGCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAA  192
V  94.7% (213/225)  IGHV3-33*01  162  ....................C...........A......A....C.............................................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------CDR3-IMGT----------------->        
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  T  A  V  S  V  T  G  T  L  D  Y  W  G  Q
                    Query_12104  193  CAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATAGAACGGCTGTATCAGTGACTGGCACCCTTGACTACTGGGGCCA  282
V  94.7% (213/225)  IGHV3-33*01  252  ...C.........................................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  90.0% (9/10)     IGHD6-19*01  9    -----------------------------------------------------------.....G....---------------------  18
J  97.6% (41/42)    IGHJ4*02     7    --------------------------------------------------------------------------................  22

                                                                
                                        G  A  L  V  T  V  S  S  
                    Query_12104  283  GGGAGCCCTGGTCACCGTCTCCTCAG  308
J  97.6% (41/42)    IGHJ4*02     23   ....A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_299938

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         313     2e-87
IGHD5-12*01                                                                                           21.8    0.042
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GAAGGTTAAGAC	GTGGATATAGCGGC	CAGCCTCCTGGAA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAAGGTTAAGACGTGGATATAGCGGCCAGCCTCCTGGAAGGTTCGACCCC	ARGRLRRGYSGQPPGRFDP	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  V  V  S  G  G  S  I  T  S  G  D  Y  S  W  S  W  I  R  L  P  P  G  K  G 
                    Query_12105    1    ACCCTGTCCCTCACCTGCGTTGTCTCTGGTGGCTCCATCACCAGCGGTGATTACTCCTGGAGCTGGATCCGGCTGCCTCCAGGGAAGGGC  90
V  90.0% (225/250)  IGHV4-30-2*01  49   ...................C....................G...T....G.......................A...A............  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  T  G  S  I  F  D  N  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S 
                    Query_12105    91   CTAGAGTGGACTGGGTCCATCTTTGATAATGGGCGCACCTACTACAATCCGTCCCTCAAGAGTCGAGTCACCATATCGCTGGACAAGTCC  180
V  90.0% (225/250)  IGHV4-30-2*01  139  ..G.......T.....A.....A.C...G....A.............C.............................AG.A....G....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                         R  N  H  F  S  L  E  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  L  R  R  G  Y 
                    Query_12105    181  AGGAACCACTTTTCCCTGGAACTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGCCAGAGGAAGGTTAAGACGTGGATAT  270
V  90.0% (225/250)  IGHV4-30-2*01  229  .A......G..C......A.G.....C................................C..........--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD5-12*01    1    ----------------------------------------------------------------------------------........  8

                                        3-IMGT----------------------->                                 
                                         S  G  Q  P  P  G  R  F  D  P  W  G  Q  G  T  L  V  I  V  S  S 
                    Query_12105    271  AGCGGCCAGCCTCCTGGAAGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCA  333
D  92.9% (13/14)    IGHD5-12*01    9    ..T...---------------------------------------------------------  14
J  97.7% (43/44)    IGHJ5*02       7    -------------------.................................C..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_41867

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            307     1e-85
IGHD2-21*01                                                                                           18.0    0.61 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-21*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CAAGAATTACAACTT	TGGTGATGATCGCTA	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGGGACAAGAATTACAACTTTGGTGATGATCGCTACTATGATGCATTTGATTTG	TRDKNYNFGDDRYYDAFDL	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  T  Y  W  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_12106  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGTTTCACGTTTGGCACCTATTGGATGACATGGATCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  89.2% (223/250)  IGHV3-7*01   47   ............................T..A.....C...A.T.G...........GC...G......................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  G  D  G  S  K  T  Y  Y  M  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12106  91   AGTGGGTGGCCAATATAAAAGGAGATGGAAGTAAGACATACTATATGGATTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  89.2% (223/250)  IGHV3-7*01   137  .............C.....GCA..........G...A.......G....C..............A....................C....  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  F  Y  Y  C  T  R  D  K  N  Y  N  F  G  
                    Query_12106  181  GGAACTCACTGTATCTGCAAATGAACAGCCTCAGAGTCGAGGACACGGCTTTTTATTACTGTACGAGGGACAAGAATTACAACTTTGGTG  270
V  89.2% (223/250)  IGHV3-7*01   227  A..............................G....C.............G.G.........G....A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD2-21*01  10   -------------------------------------------------------------------------------------.....  14

                                      -IMGT----------------------->                                  
                                      D  D  R  Y  Y  D  A  F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12106  271  ATGATCGCTACTATGATGCATTTGATTTGTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  333
D  86.7% (13/15)    IGHD2-21*01  15   G....T....-----------------------------------------------------  24
J  94.0% (47/50)    IGHJ3*01     1    -------------......T......G.C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_41866

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            385     4e-109
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	248	2	0	99.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12107  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.2% (248/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_12107  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  99.2% (248/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_12107  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  99.2% (248/250)  IGHV3-7*01   227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12107  271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_41865

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            272     2e-75
IGHD3-10*01                                                                                           10.3    119  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCACC	CGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACCCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	95	19	0	83.3
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	210	36	0	85.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12108  1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  85.4% (210/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  S  M  S  V  D  K  S  K 
                    Query_12108  91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCAGCATGTCAGTAGACAAGTCCAAG  180
V  85.4% (210/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A............C...A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  P  L  N  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_12108  181  AATCAATTCTCCCTCACGCTGACGCCTCTGAACGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACCCGG  270
V  85.4% (210/246)  IGHV4-4*01   229  ..C..G........G.A.....GCT..G...C..................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (5/5)     IGHD3-10*01  15   ---------------------------------------------------------------------------------------...  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_12108  271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (5/5)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_41864

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD1-26*01                                                                                           12.2    33   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTGGACCC	GGGAGC	ACAGTAGGTCGTCAGCATTAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGGACCCGGGAGCACAGTAGGTCGTCAGCATTATTACTACAATATGGACGTC	ATGPGSTVGRQHYYYNMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	230	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12109  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  93.5% (230/246)  IGHV3-23*01  47   ..........................................................C..........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  S  G  D  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  F  R  D  N  S  
                    Query_12109  91   AGTGGGTCTCAGTTATTAGTGGCAGTGGTGACAACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTTCAGAGACAACTCCA  180
V  93.5% (230/246)  IGHV3-23*01  137  ............C.........T.......GT.G.........................................C.........T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  I  L  Y  L  Q  V  N  S  L  R  V  A  D  T  A  V  Y  Y  C  A  T  G  P  G  S  T  V  G  
                    Query_12109  181  AGAACATACTGTATCTGCAAGTAAACAGCCTCAGAGTCGCGGACACGGCCGTATATTACTGTGCGACTGGACCCGGGAGCACAGTAGGTC  270
V  93.5% (230/246)  IGHV3-23*01  227  ......CG............A.G........G....C..A..........................------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD1-26*01  9    --------------------------------------------------------------------------......----------  14

                                      -IMGT----------------------->                                 
                                      R  Q  H  Y  Y  Y  N  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12109  271  GTCAGCATTATTACTACAATATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  96.1% (49/51)    IGHJ6*02     12   -----------......GG...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_352055

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_12110  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_12110  91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_12110  181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_12110  271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_352052

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           367     6e-104
IGHD2-21*02                                                                                           12.2    34    
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGCGGG	GACTGC	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCGGGGACTGCCTACTACTACGGCATGGACGTC	ARGAGTAYYYGMDV	267	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	80	30	27	3	0	90
FR2-IMGT	81	131	51	49	2	0	96.1
CDR2-IMGT	132	152	21	20	1	0	95.2
FR3-IMGT	153	266	114	105	9	0	92.1
CDR3-IMGT (germline)	267	273	7	7	0	0	100
Total	N/A	N/A	273	254	19	0	93


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  S  C  A  V  S  G  G  S  I  N  S  G  G  Y  F  W  S  W  
                    Query_12111  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCTCTCTCCTGCGCTGTCTCTGGTGGCTCCATCAACAGTGGTGGTTACTTCTGGAGCTGGA  90
V  93.0% (254/273)  IGHV4-61*08  26   ................T..............C...A.....A.................G...G..............A...........  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  T  P  G  K  G  L  E  W  I  G  Y  M  Y  Y  S  G  S  T  D  Y  H  P  S  L  R  S  R  
                    Query_12111  91   TCCGGCAGACCCCAGGGAAGGGACTGGAGTGGATTGGCTATATGTATTACAGTGGGAGCACCGATTACCACCCCTCCCTCAGGAGTCGAG  180
V  93.0% (254/273)  IGHV4-61*08  116  ........C............................G.....C..................A.C...A............A........  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  S  I  S  V  D  T  S  K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  
                    Query_12111  181  TCAGCATATCAGTCGACACGTCCAAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGA  270
V  93.0% (254/273)  IGHV4-61*08  206  ...C.........A.............................G.....C...........T............................  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      -------------CDR3-IMGT--------------->                                 
                                      R  G  A  G  T  A  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12111  271  GAGGGGCGGGGACTGCCTACTACTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
V  93.0% (254/273)  IGHV4-61*08  296  ...--------------------------------------------------------------------  298
                                      R                                                                      
D  100.0% (6/6)     IGHD2-21*02  17   ----------......-------------------------------------------------------  22
J  98.2% (54/55)    IGHJ6*02     8    ----------------............T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_161333

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*14                                                                                           369     2e-104
IGHD7-27*01                                                                                           12.2    32    
IGHJ6*02                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*14	IGHD7-27*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCATC	CTGGGG	TCC	TTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCATCCTGGGGTCCTTACCACTATTACTACGGTTTGGACGTC	ARPSWGPYHYYYGLDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12112  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCGCCAGGCAAGGGGCTGG  90
V  97.6% (242/248)  IGHV3-30*14  47   .........................................................................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  H  D  G  G  T  K  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12112  91   AGTGGGTGGCAGTTATATCACATGATGGAGGCACTAAATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  97.6% (242/248)  IGHV3-30*14  137  ....................T........A.T.A........A...............................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  S  W  G  P  Y  H  
                    Query_12112  181  AGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGACCATCCTGGGGTCCTTACCACT  270
V  97.6% (242/248)  IGHV3-30*14  227  ....................................................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD7-27*01  5    -------------------------------------------------------------------------......-----------  10
J  93.4% (57/61)    IGHJ6*02     2    ----------------------------------------------------------------------------------....T...  9

                                      T------------------>                                 
                                      Y  Y  Y  G  L  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_12112  271  ATTACTACGGTTTGGACGTCTGGGGCCAAGGGGCCACGGTCACCGTCTCCTCA  323
J  93.4% (57/61)    IGHJ6*02     10   .C.........A....................A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_352050

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           319     2e-89
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  G  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_12113  1    ACCTTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTGGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGCAAGGGG  90
V  91.8% (224/244)  IGHV4-39*01  49   ...C...........................G.....T.....G.A...G.................................G......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  Y  S  R  I  T  Y  S  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12113  91   CTGGAGTGGATTGGGACTATCTATTATAGTAGAATTACCTACTCTGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCC  180
V  91.8% (224/244)  IGHV4-39*01  139  ................G.............G.G.GC.......ACA..........C.................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_12113  181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  91.8% (224/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12113  271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_146851

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           378     3e-107
IGHD4-4*01                                                                                            14.1    9.2   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACGC	TGACGACAGT	GTTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACGCTGACGACAGTGTTAACTTTGATTAC	ARYADDSVNFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	265	23	0	92


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  N  F  M  S  Y 
                    Query_12114  2    CAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACTTCTGGTTACAACTTTATGAGCTAT  91
V  92.0% (265/288)  IGHV1-18*01  7    ...................C...........................................G............C.....CC......  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  G  G  L  E  W  M  G  W  S  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_12114  92   GGCATCAGTTGGGTGCGACAGGCCCCTGGAGGAGGACTTGAGTGGATGGGCTGGAGCAGCGCTTACAATGGTAACACGAACTATGCGCAG  181
V  92.0% (265/288)  IGHV1-18*01  97   ..T.....C.....................CA...G..............A....T.....................A........A...  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       D  F  Q  G  R  V  T  M  T  T  D  R  S  T  S  T  A  Y  L  V  L  R  S  L  S  S  D  D  T  A 
                    Query_12114  182  GACTTCCAGGGCAGAGTCACCATGACCACAGACAGATCCACGAGCACAGCCTACTTGGTGTTGAGGAGCCTGAGCTCTGACGACACGGCC  271
V  92.0% (265/288)  IGHV1-18*01  187  A.GC..............................C...................A...A.C.............A...............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  Y  A  D  D  S  V  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12114  272  GTGTATTATTGTGCGAGATACGCTGACGACAGTGTTAACTTTGATTACTGGGGACAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.0% (265/288)  IGHV1-18*01  277  ........C.........----------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                 
D  90.0% (9/10)     IGHD4-4*01   1    -----------------------....T.....-------------------------------------------------  10
J  95.6% (43/45)    IGHJ4*02     4    -------------------------------------.......C........C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_146850

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            330     1e-92
IGHD3-16*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCAGCCTGAGCGGGACAG	TGCTTAT	N/A	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCAGCCTGAGCGGGACAGTGCTTATTAC	ASQPERDSAYY	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  I  S  G  V  S  F  S  R  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12115  1    ACCCTGTCCCTCACCTGCGCTATATCTGGTGTCTCCTTCAGTAGAAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  93.1% (228/245)  IGHV4-4*02   49   .....................G.C.......G....A....C..T.G.......................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  D  S  G  S  T  N  Y  N  E  S  L  K  S  R  V  T  I  S  I  D  K  S  K 
                    Query_12115  91   GAGTGGATTGGGGAAATCTCTGATAGTGGGAGCACCAACTACAACGAGTCTCTCAAGAGTCGAGTCACCATATCAATAGACAAGTCCAAG  180
V  93.1% (228/245)  IGHV4-4*02   139  ...................A.C.......................CC...C........................G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  H  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  Q  P  E  R  D  S  A  Y 
                    Query_12115  181  AACCAATTCTCCCTGCATCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGCCAGCCTGAGCGGGACAGTGCTTAT  270
V  93.1% (228/245)  IGHV4-4*02   229  .....G.........A.G...............................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-16*01  28   -----------------------------------------------------------------------------------.......  34

                                      -->                                  
                                       Y  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_12115  271  TACTGGGGCCAGGGAACCCTGGCCACCGTCTCCTCAG  307
J  97.3% (36/37)    IGHJ4*02     12   ......................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_146853

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           403     1e-114
IGHD2-2*01                                                                                            19.9    0.17  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGGGA	AGTACCAGCT	CCTCAACCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGGAAGTACCAGCTCCTCAACCCTGACTAC	ARGGKYQLLNPDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N  N  Y
                    Query_12116  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACGTTCAACAACTA  90
V  94.5% (274/290)  IGHV1-69*01  6    ..................G...........................................................C....G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  T  V  F  G  T  T  N  Y  A  Q
                    Query_12116  91   TGCTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCATCATCACTGTCTTTGGAACAACAAACTACGCACA  180
V  94.5% (274/290)  IGHV1-69*01  96   .........C............................................G......C..A.......T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_12116  181  GAAGTTCCAGGGCAGAGTCACCATTACCGCGGACGAATCGACGAGGACAGCCTACATGGAGCTGAGTAGCCTAAGATCTGAGGACACGGC  270
V  94.5% (274/290)  IGHV1-69*01  186  .....................G.................C.....C....................C.....G.................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  G  G  K  Y  Q  L  L  N  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12116  271  CGTTTATTACTGTGCGAGAGGCGGGAAGTACCAGCTCCTCAACCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  94.5% (274/290)  IGHV1-69*01  276  ...G................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD2-2*01   14   --------------------------..........--------------------------------------------------  23
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_146852

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           349     2e-98
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GGCAACC	ATGGTTCGGGGAGTTATT	GA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGGCAACCATGGTTCGGGGAGTTATTGAACTACTTTGACTAC	ARGQPWFGELLNYFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  D  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12117  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGGTTCACCTTCAATGACTATTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGC  90
V  94.8% (236/249)  IGHV3-74*01  47   ....................G..........A..........G.AG...C.......................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      L  W  V  S  R  I  N  T  D  G  S  N  T  R  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_12117  91   TGTGGGTCTCACGTATTAATACTGATGGGAGTAACACAAGGTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  94.8% (236/249)  IGHV3-74*01  137  .....................G...........G......C.............................................G...  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  M  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  Q  P  W  F  G  E  
                    Query_12117  181  AGAACACAATGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGGGCAACCATGGTTCGGGGAGT  270
V  94.8% (236/249)  IGHV3-74*01  227  .......GC............................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-10*01  9    ----------------------------------------------------------------------------..............  22

                                      T------------------>                                  
                                      L  L  N  Y  F  D  Y  W  G  Q  G  M  L  V  T  V  S  S  
                    Query_12117  271  TATTGAACTACTTTGACTACTGGGGCCAGGGAATGTTGGTCACCGTCTCCTCAG  324
D  100.0% (18/18)   IGHD3-10*01  23   ....--------------------------------------------------  26
J  93.8% (45/48)    IGHJ4*02     1    ------...........................CCC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_146854

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           386     2e-109
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*01                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGC	TAGTAGTGTTTATTAC	AGAGATGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGCTAGTAGTGTTTATTACAGAGATGGCTTTGACTAC	ARGASSVYYRDGFDY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	46	5	0	90.2
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	293	5	4	1	0	80
Total	N/A	N/A	293	270	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  V  E  V  K  K  P  G  T  S  V  K  V  S  C  K  A  S  G  Y  T  F  D 
                    Query_12118  1    CAGATGCAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGACCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTGAT  90
V  92.2% (270/293)  IGHV1-18*01  1    ...G.T...................C...................G.........................................ACC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       A  Y  G  I  N  W  V  R  Q  A  P  R  Q  G  L  E  W  V  G  W  I  N  T  Y  T  G  D  T  N  Y 
                    Query_12118  91   GCCTATGGTATCAACTGGGTGCGACAGGCCCCTCGACAAGGACTTGAGTGGGTGGGTTGGATCAACACTTACACTGGTGACACAAACTAT  180
V  92.2% (270/293)  IGHV1-18*01  91   AG...........G...................G.......G.........A....A.......G.G......A....A...........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  R  L  R  Y  D  D 
                    Query_12118  181  GCACAGAATCTCCAGGGCAGAGTCACCATGACCACTGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGACTGAGATATGACGAC  270
V  92.2% (270/293)  IGHV1-18*01  181  ........G..........................A......................................C.......C.......  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  R  G  A  S  S  V  Y  Y  R  D  G  F  D  Y  W  G  H  G  T  L  V  T  V 
                    Query_12118  271  ACGGCCGTGTATTACTGTGCCAGGGGGGCTAGTAGTGTTTATTACAGAGATGGCTTTGACTACTGGGGCCACGGAACCCTGGTCACCGTC  360
V  92.2% (270/293)  IGHV1-18*01  271  ....................G..-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  93.8% (15/16)    IGHD3-22*01  13   -----------------------------........G.......---------------------------------------------  28
J  97.7% (43/44)    IGHJ4*01     5    -----------------------------------------------------..................A..................  41

                                             
                                       S  S  
                    Query_12118  361  TCCTCAG  367
J  97.7% (43/44)    IGHJ4*01     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_146857

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGTACCA	N/A	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGTACCAACTGCTACTACCAAATGGACGTC	ARVDCSSTNCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_12119  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_12119  91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  M  A  V  Y  Y  C  A  R  V  D  C  S  S  T  N  C  Y 
                    Query_12119  181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACATGGCCGTCTATTATTGTGCGAGAGTGGACTGTAGTAGTACCAACTGCTAC  270
V  90.6% (221/244)  IGHV4-59*01  229  C..............................CT.......C......G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD2-2*01   8    ---------------------------------------------------------------------.............--------  20
J  89.3% (50/56)    IGHJ6*02     7    ----------------------------------------------------------------------------------...A....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  T  V  I  V  S  S 
                    Query_12119  271  TACCAAATGGACGTCTGGGGCCTAGGGACCACGGTCATCGTCTCCTCA  318
J  89.3% (50/56)    IGHJ6*02     15   ...GGT................A..............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_146856

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*11                                                                                           419     2e-119
IGHD1-26*01                                                                                           18.0    0.67  
IGHJ3*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*11	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AGGGG	AGTGGGAGC	CCCTTCTTAGAGGCA	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAAGGGGAGTGGGAGCCCCTTCTTAGAGGCACTTTTGATATC	AKEGEWEPLLRGTFDI	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	70	5	0	93.3
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	110	4	0	96.5
CDR3-IMGT (germline)	290	297	8	7	1	0	87.5
Total	N/A	N/A	296	282	14	0	95.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  S  A  V  K  V  A  C  K  A  S  G  G  T  F  S 
                    Query_12120  2    CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAGGAAGCCTGGGTCCGCGGTGAAAGTCGCCTGCAAGGCTTCTGGAGGCACCTTCAGC  91
V  95.3% (282/296)  IGHV1-69*11  1    ...........G......................A.............T.......G...T.............................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  V  I  P  F  F  G  T  A  N  Y 
                    Query_12120  92   AACTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGGTCATCCCTTTCTTTGGTACAGCAAACTAC  181
V  95.3% (282/296)  IGHV1-69*11  91   .G..........................................................A........A..C.................  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  R  L  Q  D  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_12120  182  GCACAGAGGCTGCAGGACAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGAC  271
V  95.3% (282/296)  IGHV1-69*11  181  .......A.T.C....G.........................................................................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  K  E  G  E  W  E  P  L  L  R  G  T  F  D  I  W  G  Q  G  T  M  V  I 
                    Query_12120  272  ACGGCCGTGTATTACTGTGCGAAAGAAGGGGAGTGGGAGCCCCTTCTTAGAGGCACTTTTGATATCTGGGGCCAAGGGACAATGGTCATC  361
V  95.3% (282/296)  IGHV1-69*11  271  ......................G...----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (9/9)     IGHD1-26*01  6    -------------------------------.........--------------------------------------------------  14
J  97.8% (44/45)    IGHJ3*02     6    -------------------------------------------------------.................................C.  40

                                                
                                       V  S  S  
                    Query_12120  362  GTCTCTTCAG  371
J  97.8% (44/45)    IGHJ3*02     41   ..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_278455

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           364     5e-103
IGHD2-2*02                                                                                            44.9    5e-09 
IGHJ5*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAACC	ATATTGTAGTAGTTCCAGCTGCTATA	N/A	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAACCATATTGTAGTAGTTCCAGCTGCTATATGGTTCGACCCC	ARGNHIVVVPAAIWFDP	246	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	111	3	0	97.4
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_12121  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  96.8% (241/249)  IGHV4-31*02  50   .....TCC...A..............................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  I  T  I  S  V  D  T  S  
                    Query_12121  94   TGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAATTACCATATCAGTAGACACGTCTA  183
V  96.8% (241/249)  IGHV4-31*02  140  ..............T..................................................G........................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  N  H  I  V  V  V  
                    Query_12121  184  AGAATCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGAACCATATTGTAGTAGTTC  273
V  96.8% (241/249)  IGHV4-31*02  230  ....C....................C...........................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  96.2% (25/26)    IGHD2-2*02   4    ---------------------------------------------------------------------------.............A.  18

                                      GT-------------------->                                  
                                      P  A  A  I  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12121  274  CAGCTGCTATATGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  96.2% (25/26)    IGHD2-2*02   19   ...........----------------------------------------------  29
J  100.0% (46/46)   IGHJ5*02     6    -----------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_278454

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         360     1e-101
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	N/A	GAAGGGACAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGAAGGGACATTATGGACGTC	ARGRDIMDV	244	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_12122    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-30-2*01  49   ..........................................................................................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  H  S  G  L  S  N  S  N  P  S  L  K  S  R  L  T  I  S  V  D  R  S 
                    Query_12122    91   CTGGAGTGGATTGGATACATCCATCATAGTGGGCTCAGCAACTCCAACCCGTCCCTCAAGAGTCGACTCACCATATCAGTAGACAGGTCC  180
V  96.0% (240/250)  IGHV4-30-2*01  139  ..............G......T...........AG..C.T...A......................G.......................  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->
                                         K  N  Q  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  D  I  M  D  V 
                    Query_12122    181  AAGAACCAGTTGTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCCAGAGGAAGGGACATTATGGACGTC  270
V  96.0% (240/250)  IGHV4-30-2*01  229  ...........C.......A..................................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  100.0% (43/43)   IGHJ6*02       20   --------------------------------------------------------------------------------..........  29

                                                                         
                                         W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12122    271  TGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  303
J  100.0% (43/43)   IGHJ6*02       30   .................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_278457

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           316     2e-88
IGHD6-13*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  A  L  E  
                    Query_12123  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGCACTGGAGT  93
V  91.4% (223/244)  IGHV4-59*08  50   .....TCC...A..............................G......................................G........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  S  I  F  Y  T  G  T  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_12123  94   GGATCGGGTCTATCTTTTACACTGGGACCACCAACTACGACCCCTCTCTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGAACC  183
V  91.4% (223/244)  IGHV4-59*08  140  ....T....A.....A.....G.....G..........A.......C....................A.....A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  R  V  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  H  R  A  A  A  G  P  
                    Query_12123  184  AGTTCTCCCTGAGAGTGACCTCTCTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATCCCCATAGAGCAGCAGCTGGCCCCT  273
V  91.4% (223/244)  IGHV4-59*08  230  ............AGC...G....G......................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (12/12)   IGHD6-13*01  7    -------------------------------------------------------------------------............-----  18
J  93.2% (41/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  D  N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_12123  274  TTGACAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  315
J  93.2% (41/44)    IGHJ4*02     7    .....T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_278456

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           308     4e-86
IGHD3-10*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	GACCAAGG	GGTTCGGGGACTTA	CTGCAGCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGACCAAGGGGTTCGGGGACTTACTGCAGCCCTTTGACCAC	VRTKGFGDLLQPFDH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	222	25	0	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  T  S  G  F  T  L  S  S  S  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12124  1    GGTCCCTGAGACTCTCCTGTGAAACCTCTGGATTCACCTTGAGTAGTTCCACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.9% (222/247)  IGHV3-21*01  47   .....................C.G................C.....C.AT.G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  T  S  G  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12124  91   AGTGGGTCGCATCTATTACCAGTGGAAGCACTTACATCTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  89.9% (222/247)  IGHV3-21*01  137  ........T....C....GT...A.T..T.G......A....................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  L  S  G  L  R  V  E  D  T  A  V  Y  S  C  V  R  T  K  G  F  G  D  L  
                    Query_12124  181  AGAACTCACTGTTTCTGCAACTGAGTGGCCTGAGAGTCGAGGACACGGCTGTCTATTCCTGTGTGAGGACCAAGGGGTTCGGGGACTTAC  270
V  89.9% (222/247)  IGHV3-21*01  227  ............A.......A...ACA.........C...............G....A.....C...-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD3-10*01  11   ---------------------------------------------------------------------------..........G...-  24

                                      ---------------->                                  
                                      L  Q  P  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12124  271  TGCAGCCCTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.7% (43/44)    IGHJ4*02     5    -------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_278451

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           296     2e-82
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GACTAGTGA	GATAGTAGTG	CTTGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGACTAGTGAGATAGTAGTGCTTGGTGCTTTCGATATG	ARETSEIVVLGAFDM	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	217	28	0	88.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  R  S  H  S  W  S  W  I  R  Q  P  P  G  K  G  M  E 
                    Query_12125  1    ACCCTGTCCCTCACCTGCAATGTCTCTGGAGACTCCATCAGAAGTCATTCGTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGAATGGAG  90
V  88.6% (217/245)  IGHV4-59*01  49   ...................C.........T.G.........T...T.C.AC.......................A.........C.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  V  E  Y  R  G  G  S  N  Y  N  P  S  L  N  S  R  L  T  I  S  V  D  M  S  K  N 
                    Query_12125  91   TGGATTGGAAATGTCGAATACAGGGGAGGCTCCAACTACAACCCCTCCCTCAACAGTCGACTCACCATATCAGTGGACATGTCCAAGAAT  180
V  88.6% (217/245)  IGHV4-59*01  139  ........GT..A..T.T.....T..GA..A......................G......G.............A....C.........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  T  S  E  I  V  V  L  G 
                    Query_12125  181  CAGTTCTCCCTGAAGCTGAGCAGTGTGACCGCGGCGGACACGGCCGTCTATTACTGTGCGAGAGAGACTAGTGAGATAGTAGTGCTTGGT  270
V  88.6% (217/245)  IGHV4-59*01  229  .....................TC.........T..............G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  11   --------------------------------------------------------------------------..........------  20
J  95.6% (43/45)    IGHJ3*02     4    -----------------------------------------------------------------------------------------.  4

                                      ----------->                                
                                       A  F  D  M  W  G  Q  G  T  M  V  T  V  S  S
                    Query_12125  271  GCTTTCGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  314
J  95.6% (43/45)    IGHJ3*02     5    .....T.....C................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_278450

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           321     6e-90
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_12126  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_12126  91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_12126  181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.8% (225/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_12126  271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_285060

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           411     5e-117
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	276	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_12127  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.5% (276/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  T  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_12127  91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCACCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.5% (276/289)  IGHV5-51*03  96   ........G.......................A.......................T...........A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_12127  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.5% (276/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12127  271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.5% (276/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_12127  361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_278459

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           364     5e-103
IGHD2-2*01                                                                                            18.0    0.61  
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAC	TAACGATTGGAC	TACCATCTGCTA	AGGGGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGACTAACGATTGGACTACCATCTGCTAAGGGGGACGGTATGGACGTC	ARLTIGLPSAKGDGMDV	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	255	7	6	1	0	85.7
Total	N/A	N/A	255	244	11	0	95.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  S  A  M  H  W  V  R  Q  P  S  G  K  G  L  
                    Query_12128  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTCGCTCTGCTATGCACTGGGTCCGCCAGCCTTCCGGGAAAGGGCTGG  90
V  95.7% (244/255)  IGHV3-73*01  47   .........A..................................G..........................G..................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  S  N  T  N  S  Y  A  T  E  Y  A  A  S  V  K  G  R  F  P  I  S  R  D  
                    Query_12128  91   AGTGGGTTGGCCGTATTAGAAGCAACACTAACAGTTACGCGACAGAATATGCTGCGTCGGTGAAAGGCAGGTTCCCCATCTCCAGAGATG  180
V  95.7% (244/255)  IGHV3-73*01  137  .........................AG..................C............................A...............  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  K  N  T  A  Y  L  Q  M  H  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  L  T  I  G  L  
                    Query_12128  181  ATTCAAAGAACACGGCATATCTGCAAATGCACAGCCTGAAAACCGAGGACACGGCCGTGTATTATTGTGCTAGACTAACGATTGGACTAC  270
V  95.7% (244/255)  IGHV3-73*01  227  ................G............A..................................C...A......---------------  301
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  91.7% (11/12)    IGHD2-2*01   16   ---------------------------------------------------------------------------------------...  18

                                      DR3-IMGT-------------------->                                 
                                      P  S  A  K  G  D  G  M  D  V  W  G  R  G  T  T  V  I  V  S  S 
                    Query_12128  271  CATCTGCTAAGGGGGACGGTATGGACGTCTGGGGCCGAGGGACCACGGTCATCGTCTCCTCA  332
D  91.7% (11/12)    IGHD2-2*01   19   ..G......-----------------------------------------------------  27
J  95.7% (45/47)    IGHJ6*02     16   ---------------.....................A..............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_46896

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_12129  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  94.8% (276/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_12129  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  G  S  R  K  A  A  D  T  A
                    Query_12129  181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCGTCAGTACCGCCTACCTACAGTGGGGCAGCCGGAAGGCCGCGGACACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  .......C................................A....C...........G......A......T.......T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_12129  271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  94.8% (276/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_12129  361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_113608

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*14                                                                                           413     2e-117
IGHD3-10*01                                                                                           12.2    37    
IGHJ2*01                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*14	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGACCGCAGAGATGGCAAAA	TTCGGG	TG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGACCGCAGAGATGGCAAAATTCGGGTGTACTGGTACTTCGGTCTC	ARGDRRDGKIRVYWYFGL	291	344	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	19	5	0	79.2
FR3-IMGT	177	290	114	110	4	0	96.5
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	294	279	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  
                    Query_12130  4    AGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCAGGAGGCACCTTCAGCA  93
V  94.9% (279/294)  IGHV1-69*14  2    .............G........G..................................................T................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  V  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  V  P  V  L  R  T  A  N  Y  
                    Query_12130  94   GCTATGTTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGGGGATCGTCCCTGTCCTTCGTACAGCGAACTACG  183
V  94.9% (279/294)  IGHV1-69*14  92   ......C.....G..........................................A......A.....A..T..G.......A.......  181
                                      S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  K  F  Q  D  R  V  T  I  T  A  D  K  S  R  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  
                    Query_12130  184  CACAGAAGTTCCAGGACAGAGTCACGATTACCGCGGACAAATCCAGGAGTACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACA  273
V  94.9% (279/294)  IGHV1-69*14  182  ...............G.............................C...C....C...................................  271
                                      A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><----------------------CDR3-IMGT--------------------->                   
                                      T  A  V  Y  Y  C  A  R  G  D  R  R  D  G  K  I  R  V  Y  W  Y  F  G  L  W  G  R  G  T  L  
                    Query_12130  274  CGGCCGTGTATTACTGTGCGAGAGGAGACCGCAGAGATGGCAAAATTCGGGTGTACTGGTACTTCGGTCTCTGGGGCCGTGGCACCCTGG  363
V  94.9% (279/294)  IGHV1-69*14  272  ........................------------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD3-10*01  13   ---------------------------------------------......---------------------------------------  18
J  96.2% (50/52)    IGHJ2*01     2    -----------------------------------------------------.............A.......................  38

                                                     
                                      V  T  V  S  S  
                    Query_12130  364  TCACCGTCTCCTCAG  378
J  96.2% (50/52)    IGHJ2*01     39   ....T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_270204

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         399     3e-113
IGHD2-2*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATCGTCCGG	GCTATGCC	CAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTCCGGGCTATGCCCAATACTACTTTACCTAT	ARDRPGYAQYYFTY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	272	17	0	94.1


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  D  S  F  T  N  S
                    Query_12131    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGAGACAGCTTCACCAACTC  90
V  94.1% (272/289)  IGHV5-10-1*01  6    .........................................................................T.......T....G..A  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  L  P  G  K  G  L  E  W  M  G  K  I  D  P  S  D  S  Y  T  I  H  S  P
                    Query_12131    91   CTGGATCAGTTGGGTGCGCCAATTGCCCGGGAAAGGCCTGGAGTGGATGGGGAAGATTGATCCTAGTGACTCTTATACCATCCACAGTCC  180
V  94.1% (272/289)  IGHV5-10-1*01  96   .........C...........GA..............................G..........................A.T....C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  L  N  T  A  Y  L  L  W  S  S  L  T  A  S  D  T  A
                    Query_12131    181  GTCCTTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCCTCAACACTGCCTACTTGCTGTGGAGCAGCCTGACGGCCTCGGACACCGC  270
V  94.1% (272/289)  IGHV5-10-1*01  186  ........................................A...G..........C...A..............A...............  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------CDR3-IMGT--------------->                                  
                                          I  Y  Y  C  A  R  D  R  P  G  Y  A  Q  Y  Y  F  T  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12131    271  CATTTATTACTGTGCGAGAGATCGTCCGGGCTATGCCCAATACTACTTTACCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  94.1% (272/289)  IGHV5-10-1*01  276  ...G...............----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                       
D  100.0% (8/8)     IGHD2-2*01     24   -----------------------------........----------------------------------------------------  31
J  93.8% (45/48)    IGHJ4*02       1    -----------------------------------------........GA...C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_270208

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           310     1e-86
IGHD3-3*01                                                                                            23.8    0.011
IGHJ5*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TATGGGGTCCAC	TTTTTGGAGTGG	AATTCTCCCGGCG	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATATGGGGTCCACTTTTTGGAGTGGAATTCTCCCGGCGGACCTC	ARDMGSTFWSGILPADL	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  R  S  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12132  1    GGTCCCTGAGACTCTCCTGTGTGGCCTCTGGATTCACCTTCAGAAGCCACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTCG  90
V  89.6% (224/250)  IGHV3-74*01  47   .....................CA....................T...T........................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  A  R  I  N  K  E  G  G  N  T  V  Y  A  D  S  V  N  G  R  F  T  L  S  R  D  N  A  
                    Query_12132  91   AGTGGATCGCACGTATTAATAAAGAGGGGGGCAACACAGTCTACGCGGACTCTGTGAATGGCCGATTCACCCTCTCCAGAGACAACGCCA  180
V  89.6% (224/250)  IGHV3-74*01  137  T....G..T............GT..T...A.T.G....AG............C.....G............A..................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  M  V  Y  L  Q  M  S  S  L  R  P  D  D  T  A  V  Y  F  C  A  R  D  M  G  S  T  F  W  
                    Query_12132  181  AGAACATGGTGTATCTGCAAATGAGCAGTCTGAGACCCGACGACACGGCTGTCTATTTCTGTGCAAGAGATATGGGGTCCACTTTTTGGA  270
V  89.6% (224/250)  IGHV3-74*01  227  ......C.C...............A..........G....G...........G....A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD3-3*01   10   ----------------------------------------------------------------------------------........  17

                                      GT-------------------->                                  
                                      S  G  I  L  P  A  D  L  W  G  P  G  T  L  V  T  V  S  S  
                    Query_12132  271  GTGGAATTCTCCCGGCGGACCTCTGGGGCCCGGGAACCCTGGTCACCGTCTCTTCAG  327
D  100.0% (12/12)   IGHD3-3*01   18   ....-----------------------------------------------------  21
J  92.5% (37/40)    IGHJ5*02     12   -----------------....C........A.....................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_113603

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     3e-91
IGHD5-12*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAAAA	CGGGCA	GGATATAGTGACTAC	AACGCGCAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAAACGGGCAGGATATAGTGACTACAACGCGCAGGACTAC	VKRAGYSDYNAQDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	248	6	4	2	0	66.7
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  F  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12133  1    GGTCCCTGAGACTCTCCTTTGCAGCCTCTGGATTCACGTTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (228/248)  IGHV3-23*01  47   ..................G..................C.......G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  A  T  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12133  91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGCTACCACATACTACACAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  91.9% (228/248)  IGHV3-23*01  137  ..............................G..G..........G.............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  E  M  N  S  L  R  S  D  D  T  A  V  Y  F  C  V  K  R  A  G  Y  S  D  Y  
                    Query_12133  181  AGAACACCCTTTATTTGGAAATGAACAGCCTGAGAAGTGACGACACGGCTGTCTATTTTTGTGTAAAACGGGCAGGATATAGTGACTACA  270
V  91.9% (228/248)  IGHV3-23*01  227  .......G..G...C..C.................GCC..G........C..A....AC....CG...----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (14/15)    IGHD5-12*01  3    --------------------------------------------------------------------------..........G....-  17

                                      ------------->                                  
                                      N  A  Q  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_12133  271  ACGCGCAGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  318
J  97.5% (39/40)    IGHJ4*02     9    --------....................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_113606

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            405     4e-115
IGHD3-10*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGAC	TGGTTCGGGGA	CTT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTAC	ARVTGSGTYSFDY	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	74	1	0	98.7
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	102	12	0	89.5
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	277	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  G 
                    Query_12134  2    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCGGC  91
V  93.9% (277/295)  IGHV1-8*02   1    .......................G...............................................................AC.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  D  Y 
                    Query_12134  92   AGCTATGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATGAATCCTAACAGTGGGAACACAGACTAT  181
V  93.9% (277/295)  IGHV1-8*02   91   ..............................A..................................C...........T.......G....  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  Y  M  E  L  S  S  L  G  S  A  D 
                    Query_12134  182  GCACAGAAGTTCCGGGGCAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCTACATGGAGCTGAGTAGTCTGGGATCTGCCGAC  271
V  93.9% (277/295)  IGHV1-8*02   181  .............A.......................A...C..C.T........................C..C...A......AG...  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  Y  C  A  R  V  T  G  S  G  T  Y  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_12134  272  ACGGCCGTCTATTACTGTGCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  361
V  93.9% (277/295)  IGHV1-8*02   271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (11/11)   IGHD3-10*01  10   -----------------------------...........--------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    -------------------------------------------...A......C....................................  47

                                       
                                       
                    Query_12134  362  G  362
J  95.8% (46/48)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_113607

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           324     7e-91
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	29	28	28	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
Total	N/A	N/A	241	224	17	0	92.9


Alignments

                                      <---------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT---------
                                        S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E
                    Query_12135  2    GTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGGA  91
V  92.9% (224/241)  IGHV3-33*03  48   .......................................C.....C.....C................................G.....  137
                                        S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E

                                      ------------><-------CDR2-IMGT------><----------------------------------------------------
                                        W  V  A  V  I  W  Y  N  G  I  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  K
                    Query_12135  92   GTGGGTGGCAGTTATCTGGTATAATGGAATTAACAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCAA  181
V  92.9% (224/241)  IGHV3-33*03  138  ...............A......G......G...T................................................A.......  227
                                        W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K

                                      FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT--------
                                        N  T  L  F  L  Q  M  N  S  L  R  A  D  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  D
                    Query_12135  182  GAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGACGACACCGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCGA  271
V  92.9% (224/241)  IGHV3-33*03  228  ......G....A......A....................G.....G...G.G.....C...-----------------------------  288
                                        N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                              
D  90.9% (10/11)    IGHD6-13*01  7    ------------------------------------------------------------------....G......-------------  17
J  97.8% (45/46)    IGHJ5*02     6    ----------------------------------------------------------------------------------........  13

                                      --->                                  
                                        P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12135  272  CCCCTGGGGCCAGGGTACCCTGGTCACCGTCTCCTCAG  309
J  97.8% (45/46)    IGHJ5*02     14   ...............A......................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_113605

Length=414
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           389     2e-110
IGHD3-3*01                                                                                            46.8    1e-09 
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGAGCTTGAC	TTACGATTTTTGGAGTGGTTATTA	CCCGACC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGAGCTTGACTTACGATTTTTGGAGTGGTTATTACCCGACCACTACTACTACGCTATGGACGTC	ARGELDLRFLEWLLPDHYYYAMDV	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  T  H 
                    Query_12136  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTTCCACTCAC  91
V  93.1% (269/289)  IGHV1-18*04  7    .................................................................................A...GCT..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  K  K  S  I  T  K  Y  A  Q 
                    Query_12136  92   GGTATTAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGCTAAGAAAAGTATCACAAAGTATGCACAG  181
V  93.1% (269/289)  IGHV1-18*04  97   .....C.............................G...........................T.C..TG...A......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  R  D  R  V  T  M  T  T  D  T  S  T  T  T  V  Y  M  E  L  R  S  L  R  S  D  D  A  A 
                    Query_12136  182  AAGTTCCGAGACAGAGTCACCATGACCACAGACACATCCACGACCACAGTCTACATGGAACTGAGGAGCCTGAGATCTGACGACGCGGCC  271
V  93.1% (269/289)  IGHV1-18*04  187  ...C...AG.G................................G.....C.........G........................A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------------CDR3-IMGT------------------------------>      
                                       V  Y  Y  C  A  R  G  E  L  D  L  R  F  L  E  W  L  L  P  D  H  Y  Y  Y  A  M  D  V  W  G 
                    Query_12136  272  GTGTATTACTGTGCGAGAGGGGAGCTTGACTTACGATTTTTGGAGTGGTTATTACCCGACCACTACTACTACGCTATGGACGTCTGGGGC  361
V  93.1% (269/289)  IGHV1-18*04  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (24/24)   IGHD3-3*01   4    ------------------------------........................------------------------------------  27
J  98.2% (55/56)    IGHJ6*02     7    -------------------------------------------------------------............G................  35

                                                                 
                                       Q  G  T  T  V  T  V  S  S 
                    Query_12136  362  CAAGGGACCACGGTCACCGTCTCCTCA  388
J  98.2% (55/56)    IGHJ6*02     36   ...........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40604112


Query= Query_252603

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         332     3e-93
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGTCAA	TACTATGCTATTAGTGCTTATT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGTCAATACTATGCTATTAGTGCTTATTACTACTTTGACCAC	ARGQYYAISAYYYFDH	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  D  V  S  G  G  S  I  S  S  G  G  Y  Y  W  N  W  I  R  Q  T  P  G  K  G 
                    Query_12137    1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAATTGGATTCGACAGACCCCAGGGAAGGGC  90
V  92.7% (230/248)  IGHV4-30-4*01  49   ..................AC.............................A...........G......C..C...C..............  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  S  V  Y  Y  S  G  R  T  Y  D  S  P  S  L  K  S  R  V  T  L  S  V  D  T  S 
                    Query_12137    91   CTGGAGTGGATTGGGTCCGTCTATTACAGTGGGCGCACCTATGACAGCCCGTCCCTCAAGAGTCGAGTTACCTTATCAGTCGACACGTCC  180
V  92.7% (230/248)  IGHV4-30-4*01  139  ................A.A..............A.......CT...A.........................A.......A.........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                         K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  Q  Y  Y  A  I  S 
                    Query_12137    181  AAGAACCAGTTCTCCCTGAGGTTGAGCTCTGTGACTGCCGCAGACACGGCCGTCTATTACTGTGCCAGGGGTCAATACTATGCTATTAGT  270
V  92.7% (230/248)  IGHV4-30-4*01  229  ...................A.C...............................G..............----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  86.4% (19/22)    IGHD3-22*01    5    ---------------------------------------------------------------------------.......A..G....  19

                                        GT------------------>                                  
                                         A  Y  Y  Y  F  D  H  W  G  R  G  I  L  V  T  V  T  S  
                    Query_12137    271  GCTTATTACTACTTTGACCACTGGGGCCGGGGAATCCTGGTCACCGTCACGTCAG  325
D  86.4% (19/22)    IGHD3-22*01    20   .G.....------------------------------------------------  26
J  89.6% (43/48)    IGHJ4*02       1    -------...........T.........A.....C.............T.C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_275752

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           288     5e-80
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ1*01                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GAAGTCCGGATC	TAGCAGTGG	TTGATGACTTTGCCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTCCGGATCTAGCAGTGGTTGATGACTTTGCCCTC	ARSPDLAVVDDFAL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  T  T  F  Q  S  N  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12138  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAACCACCTTTCAAAGCAATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGTCTGG  90
V  87.4% (215/246)  IGHV3-23*01  47   ................................TT.......AGC...T.....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  S  A  S  G  A  N  I  Y  Y  A  A  S  L  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12138  91   AGTGGGTCGCTGGAATCAGCGCGAGTGGTGCAAACATATACTACGCAGCCTCCCTGAAGGGCCGCTTCACCATCTCCAGAGACAACTCGA  180
V  87.4% (215/246)  IGHV3-23*01  137  ........T.A.CT..T..T.GT.......GT.G..C...........A....G..........G....................T..C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      M  S  T  V  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  S  P  D  L  A  V  V  
                    Query_12138  181  TGAGCACGGTGTATCTGCAAATGAGCAGCCTGAGAGCCGAAGACACGGCCGTATATTTTTGTGCGAGAAGTCCGGATCTAGCAGTGGTTG  270
V  87.4% (215/246)  IGHV3-23*01  227  A..A....C...............A...............G................AC.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD6-19*01  6    ------------------------------------------------------------------------------.........---  14

                                      ------------->                                  
                                      D  D  F  A  L  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_12138  271  ATGACTTTGCCCTCTGGGGCCAGGGCGCCCTGGTCACCGTTTCCTCAG  318
J  94.3% (33/35)    IGHJ1*01     18   -------------.............A.............C.......  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_319489

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           315     5e-88
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	237	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	46	5	0	90.2
CDR2-IMGT	99	122	24	21	3	0	87.5
FR3-IMGT	123	236	114	110	4	0	96.5
CDR3-IMGT (germline)	237	244	8	7	1	0	87.5
Total	N/A	N/A	233	217	16	0	93.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  L  R  Q  A  P  G  K  G  P  E  W  V  S  A  I 
                    Query_12139  12   TGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGCTCCGCCAGGCTCCAGGGAAGGGGCCGGAGTGGGTCTCAGCGATT  101
V  93.1% (217/233)  IGHV3-23*01  64   .........................G..G.T.....A....C...G........................T...............T...  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       T  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  K  N  T  L  Y  L 
                    Query_12139  102  ACTGGGAGTGGTAGTAGCACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCAAGAACACGCTGTATCTG  191
V  93.1% (217/233)  IGHV3-23*01  154  .G...T......G..............G......................................A.......................  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------CDR3-IMGT----------------->
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  Y  S  P  L  D  Y 
                    Query_12139  192  CAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC  281
V  93.1% (217/233)  IGHV3-23*01  244  ..............G....................A..............A..-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (10/10)   IGHD3-22*01  17   ------------------------------------------------------------------..........--------------  26
J  100.0% (42/42)   IGHJ4*02     7    ----------------------------------------------------------------------------------........  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12139  282  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (42/42)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_228968

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           324     7e-91
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	GTGGAGC	TTGGGGG	GCCTAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTGGAGCTTGGGGGGCCTACGACTAC	GGAWGAYDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  A  M  A  W  L  R  Q  A  P  G  K  G  L  
                    Query_12140  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCACCTATGCCATGGCCTGGCTCCGCCAGGCTCCAGGGAAGGGGCTAC  90
V  92.6% (225/243)  IGHV3-23*01  47   ..........................................G..G..........AG....G.........................GG  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  D  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12140  91   AATGGGTCTCATCTATTAGTGATAGTGGAGGTAGCACATACTACGCAGACTCCGTAAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.6% (225/243)  IGHV3-23*01  137  .G.........G.........G......T..........................G..................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      N  N  T  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  G  G  A  W  G  A  Y  D  Y  
                    Query_12140  181  ACAACACACTGTCTCTGCAAATGAATAGCCTGAGAGCCGAAGACACGGCCGTATATTATTGTGGTGGAGCTTGGGGGGCCTACGACTACT  270
V  92.6% (225/243)  IGHV3-23*01  227  .G.....G....A............C..............G.................C....---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (7/7)     IGHD3-16*01  16   ----------------------------------------------------------------------.......-------------  22
J  100.0% (38/38)   IGHJ4*02     9    -----------------------------------------------------------------------------------.......  15

                                                                     
                                      W  G  Q  G  T  L  V  T  V  S  S
                    Query_12140  271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTC  301
J  100.0% (38/38)   IGHJ4*02     16   ...............................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_228969

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           325     3e-91
IGHD6-19*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAATGGGAGAC	CAGTGGCTG	AGACGTCCACACTTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAATGGGAGACCAGTGGCTGAGACGTCCACACTTCCTTGACTCC	ARDLMGDQWLRRPHFLDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  R  Y  G  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12141  1    GGTCCCTGAGACTCTCCTGTTCAGCGTCTGGATTCACCTTCAGTCGCTATGGCTTGCACTGGGTCCGCCAGGCTCCGGGCAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-33*01  47   ....................G.......................A........A......................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  I  I  S  S  D  G  R  D  E  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12141  91   AGTGGCTGGCAATTATATCGTCTGATGGAAGGGATGAAAACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  91.6% (229/250)  IGHV3-33*01  137  .....G.....G......G..A.........TA..A..T...................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  H  T  F  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  L  M  G  D  Q  W  
                    Query_12141  181  GGCACACCTTTTTCCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTATTGTGCGAGAGATTTAATGGGAGACCAGTGGC  270
V  91.6% (229/250)  IGHV3-33*01  227  A.A....GC.G.AT....................................G.......C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-19*01  9    -----------------------------------------------------------------------------------.......  15

                                      IMGT--------------------->                                  
                                      L  R  R  P  H  F  L  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12141  271  TGAGACGTCCACACTTCCTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  100.0% (9/9)     IGHD6-19*01  16   ..----------------------------------------------------------  17
J  97.6% (41/42)    IGHJ4*02     7    ------------------......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_228965

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         367     6e-104
IGHD4-17*01                                                                                           21.8    0.041 
IGHJ5*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGACTACGGTG	GTGACTC	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATGACTACGGTGGTGACTCCAATTGGTTCGACCCC	VRDDYGGDSNWFDP	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	243	8	0	96.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  R  G 
                    Query_12142    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  96.8% (243/251)  IGHV4-30-2*01  49   .....................................................................................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  S  Y  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_12142    91   CTGGAGTGGATTGGGTACATCTATCATAGTGGGAGCTCCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCAATAGACACGTCC  180
V  96.8% (243/251)  IGHV4-30-2*01  139  ....................................A.....................................A...G......G....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  D  D  Y  G  G  D  S 
                    Query_12142    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGTCAGAGATGACTACGGTGGTGACTCC  270
V  96.8% (243/251)  IGHV4-30-2*01  229  .....................................................G.....C....C......-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD4-17*01    1    -----------------------------------------------------------------------...........--------  11
J  97.9% (47/48)    IGHJ5*02       2    -----------------------------------------------------------------------------------------.  2

                                        -------------->                                
                                         N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12142    271  AATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  317
J  97.9% (47/48)    IGHJ5*02       3    ..C............................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_228967

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD3-16*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_12143  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (227/249)  IGHV4-61*01  49   .......................C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  G  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  T  S 
                    Query_12143  91   CTGGGGTGGATTGGACATATCTATTACACTGGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACACGTCC  180
V  91.2% (227/249)  IGHV4-61*01  139  ....A.........GT............G......CAC..A.........................G.CA....A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y 
                    Query_12143  181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTAT  270
V  91.2% (227/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------------.....  28

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_12143  271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
D  100.0% (7/7)     IGHD3-16*02  29   ..--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_228960

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12144  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ........................................G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_12144  91   TGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ........G...A..T...............................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y 
                    Query_12144  181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............C....C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12144  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_228961

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           427     9e-122
IGHD3-16*02                                                                                           37.2    1e-06 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGTC	CGTTTGGGGGAATTATCGTTAT	TTGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCGTTTGGGGGAATTATCGTTATTTGGGCTAC	ARGSVWGNYRYLGY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	281	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_12145  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  97.2% (281/289)  IGHV5-51*01  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_12145  91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  97.2% (281/289)  IGHV5-51*01  96   C...................................................A........................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  T  T  T  A  Y  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_12145  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCACCACTACCGCCTACCTGCAGTGGAACAGCCTGAAGGCCTCGGACACCGC  270
V  97.2% (281/289)  IGHV5-51*01  186  .........................................T..GC...................G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  G  S  V  W  G  N  Y  R  Y  L  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12145  271  CATATATTACTGTGCGAGAGGGTCCGTTTGGGGGAATTATCGTTATTTGGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  97.2% (281/289)  IGHV5-51*01  276  ...G...............----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  95.5% (21/22)    IGHD3-16*02  13   ------------------------...........G..........-------------------------------------------  34
J  100.0% (38/38)   IGHJ4*02     11   ---------------------------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_228963

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           291     5e-81
IGHD2-2*01                                                                                            18.0    0.59 
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	ACG	AGTAGTGCCAGC	CCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAACGAGTAGTGCCAGCCCTTACTACCACCTCGGCATGGACGTC	VRTSSASPYYHLGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	217	31	0	87.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  S  F  A  M  H  W  V  R  Q  A  P  D  R  G  L  
                    Query_12146  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCGACAGCTTTGCGATGCACTGGGTCCGCCAGGCTCCCGACAGGGGGCTGG  90
V  87.5% (217/248)  IGHV3-30*04  47   .........................................AGT....A...T.......................A.G..A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  V  S  Y  D  G  S  P  Q  F  Y  A  D  S  V  K  G  R  F  S  V  S  R  D  N  S  
                    Query_12146  91   AGTGGGTGGCAGTTGTTTCATATGATGGAAGTCCTCAGTTTTACGCAGACTCCGTGAAGGGCCGCTTCAGCGTCTCCAGAGACAATTCCG  180
V  87.5% (217/248)  IGHV3-30*04  137  ..............A.A...............AA.A.A.AC.......................A....C.A.................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      A  N  T  V  S  L  Q  M  N  D  L  R  R  E  D  S  G  V  Y  Y  C  V  R  T  S  S  A  S  P  Y  
                    Query_12146  181  CGAACACGGTGTCTCTGCAAATGAACGACCTGAGACGTGAGGACTCGGGTGTTTATTACTGTGTGAGAACGAGTAGTGCCAGCCCTTACT  270
V  87.5% (217/248)  IGHV3-30*04  227  A.......C...A.............AG.......GC.......A...C...G..........C....----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD2-2*01   11   -----------------------------------------------------------------------......A.....-------  22
J  90.6% (48/53)    IGHJ6*02     6    --------------------------------------------------------------------------------------....  9

                                      T------------------>                             
                                      Y  H  L  G  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_12146  271  ACCACCTCGGCATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTC  319
J  90.6% (48/53)    IGHJ6*02     10   ..T..TA...T.................A....................  58


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_69799

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACAGACTAC	AALIAASHFTDY	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	100	14	0	87.7
CDR3-IMGT (germline)	290	292	3	3	0	0	100
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_12147  3    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCA  92
V  92.4% (268/290)  IGHV5-51*01  2    ..G...............................A...................................T...................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  V  P  G  Q  G  L  E  L  M  G  L  I  Y  P  G  D  S  D  T  W  Y  
                    Query_12147  93   CCTACTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCAAGGCCTGGAGTTGATGGGGCTCATCTATCCTGGTGACTCTGATACCTGGTACA  182
V  92.4% (268/290)  IGHV5-51*01  92   G.........................A........A............G.......A..........................A.A....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  L  Q  G  Q  V  I  I  S  A  D  K  S  V  T  S  A  Y  L  Q  W  T  P  L  K  A  S  D  
                    Query_12147  183  GTCCGTCCCTCCAAGGCCAGGTCATCATCTCGGCCGACAAGTCCGTCACCTCCGCCTACCTGCAGTGGACCCCCCTGAAGGCCTCGGACA  272
V  92.4% (268/290)  IGHV5-51*01  182  .C......T...............C......A............A...G.A..................G.AG.................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12147  273  CCGCCATTTACTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACAGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  359
V  92.4% (268/290)  IGHV5-51*01  272  .......G..T.........-------------------------------------------------------------------  291
                                      T  A  M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    -------------------------...A.....-----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -----------------------------------------------.................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_165514

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            414     5e-118
IGHD6-19*01                                                                                           27.6    8e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GAAGAG	ATAGCAGTGGCTGG	CTCGTCA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGAAGAGATAGCAGTGGCTGGCTCGTCAACTTTGACTAC	ARGRDSSGWLVNFDY	273	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	29	1	0	96.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	26	1	0	96.3
FR3-IMGT	159	272	114	109	5	0	95.6
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	272	7	0	97.5


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  T  S  A  A  W  N  W  
                    Query_12148  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCACCAGTGCTGCTTGGAACTGGA  90
V  97.5% (272/279)  IGHV6-1*01   26   .....................................................................A....................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  H  N  D  Y  A  I  S  V  K  
                    Query_12148  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGCATAATGATTATGCAATATCTGTCAAAA  180
V  97.5% (272/279)  IGHV6-1*01   116  ..............................................................T..............G.......G....  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  N  I  N  P  D  T  P  K  N  Q  F  S  L  H  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_12148  181  GTCGAATAAACATCAACCCAGACACACCCAAGAACCAGTTCTCCCTGCACCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  97.5% (272/279)  IGHV6-1*01   206  .........C................T......................G........................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-----------------CDR3-IMGT----------------->                                
                                      C  A  R  G  R  D  S  S  G  W  L  V  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12148  271  GTGCAAGAGGAAGAGATAGCAGTGGCTGGCTCGTCAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  349
V  97.5% (272/279)  IGHV6-1*01   296  .........----------------------------------------------------------------------  304
                                      C  A  R                                                                        
D  100.0% (14/14)   IGHD6-19*01  5    ---------------..............--------------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     4    ------------------------------------...........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_4293

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           249     2e-68
IGHD3-16*01                                                                                           12.2    30   
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD3-16*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TATTG	CACAGGGGCTTCAG	GTTATG	GA	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGGGCTTCAGGTTATGGATGGCTCGACCCC	RGFRLWMARP	231	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	17	7	0	70.8
FR2-IMGT	41	91	51	48	3	0	94.1
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	99	14	1	86.8
Total	N/A	N/A	217	190	26	1	87.6


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  L  T  M  S  D  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_12149  13   GTCTGGACTCACAATGAGTGACTACGGCATGCATTGGGTCCGCCAGGCTCCAGGCAAGGGACTGGAATGGGTGGCAGTTATATGGTATGA  102
V  87.6% (190/217)  IGHV3-33*03  72   .......T....CT.C...AG...T........C..........................G.....G.......................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  I  K  K  I  L  C  R  F  R  E  G  P  I  H  H  F  *  R  R  L  Q  E  H  P  I  S  A  N  G
                    Query_12149  103  TGGAATTAAAAAAATTCTATGCAGATTCCGTGAAGGGCCGATTCACCATTTCTAGAGACGACTCCAAGAACACCCTATTTCTGCAAATGG  192
V  87.6% (190/217)  IGHV3-33*03  162  .....G...T...-.A.........C.......................C..C......A.............G..G.A..........A  250
                                        G  S  N  K   Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  

                                      -------------------------------------><-----------CDR3-IMGT----------->                   
                                        Q  S  E  S  R  R  H  G  S  I  L  L  H  R  G  F  R  L  W  M  A  R  P  L  G  P  G  S  P  G
                    Query_12149  193  ACAGTCTGAGAGCCGACGACACGGCTCTATATTATTGCACAGGGGCTTCAGGTTATGGATGGCTCGACCCCTGGGGCCAGGGAGCCCTGG  282
V  87.6% (190/217)  IGHV3-33*03  251  ....C...........G.........G.G.....C..-----------------------------------------------------  287
                                      N  S  L  R  A  E  D  T  A  V  Y  Y                                                        
D  100.0% (6/6)     IGHD3-16*01  24   ---------------------------------------------------......---------------------------------  29
J  95.7% (44/46)    IGHJ5*02     6    -----------------------------------------------------------...T....................A......  36

                                                     
                                        H  R  L  L   
                    Query_12149  283  TCACCGTCTCCTCAG  297
J  95.7% (44/46)    IGHJ5*02     37   ...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_69793

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     9e-100
IGHD6-13*01                                                                                           21.8    0.041 
IGHJ3*01                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  L  S  G  G  S  I  S  S  G  G  F  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_12150  1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGGCTCCATCAGCAGTGGTGGTTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.2% (238/250)  IGHV4-31*03  49   .....................G..............................A........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  Y  S  G  S  T  F  Y  S  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_12150  91   CTGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAGCCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCT  180
V  95.2% (238/250)  IGHV4-31*03  139  .....................T..................A.....A...........................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V 
                    Query_12150  181  AAGAACCAATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTA  270
V  95.2% (238/250)  IGHV4-31*03  229  ........G..........A.....GC...............................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD6-13*01  11   ------------------------------------------------------------------------...........-------  21

                                      ----------------->                                  
                                       G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12150  271  GGCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  98.0% (48/49)    IGHJ3*01     2    ---.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_69792

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD4-17*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTCGAGCGG	CTACGGTGGCTAC	GACTCTTCTATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCGAGCGGCTACGGTGGCTACGACTCTTCTATTTTTGACTAC	ARESSGYGGYDSSIFDY	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  R  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12151  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGTCGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ..................A.......................A...............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  T  G  N  T  K  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  P  S  K  H 
                    Query_12151  91   TGGATTGGGTATGTCTATTACACTGGCAACACCAAGTACAGCCCCTCCCTCAAAAGTCGAGTCACCATATCAGTAGACCCGTCCAAGCAC  180
V  92.7% (227/245)  IGHV4-59*01  139  ............A.........G...G.G......C....A............G........................A........A..  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  N  L  Y  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  S  G  Y  G  G  Y  D 
                    Query_12151  181  CAGTTCTCCCTCAACCTGTACTCTGTCACCGCTGCGGACACGGCCGTGTACTATTGTGCGAGAGAGTCGAGCGGCTACGGTGGCTACGAC  270
V  92.7% (227/245)  IGHV4-59*01  229  ...........G..G...AG......G.......................T..C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.3% (12/13)    IGHD4-17*01  4    --------------------------------------------------------------------------........A....---  16

                                      ----------------->                                  
                                       S  S  I  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12151  271  TCTTCTATTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  100.0% (43/43)   IGHJ4*02     6    ---------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_69797

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-2*02                                                                                            44.9    5e-09 
IGHJ5*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAACC	ATATTGTAGTAGTTCCAGCTGCTATA	N/A	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAACCATATTGTAGTAGTTCCAGCTGCTATATGGTTCGACCCC	ARGNHIVVVPAAIWFDP	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12152  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_12152  91   CTGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAATTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T..................................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  N  H  I  V  V  V 
                    Query_12152  181  AAGAATCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGAACCATATTGTAGTAGTT  270
V  98.4% (246/250)  IGHV4-31*03  229  .....C....................C...........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  96.2% (25/26)    IGHD2-2*02   4    ----------------------------------------------------------------------------.............A  17

                                      MGT-------------------->                                  
                                       P  A  A  I  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12152  271  CCAGCTGCTATATGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  96.2% (25/26)    IGHD2-2*02   18   ............----------------------------------------------  29
J  100.0% (46/46)   IGHJ5*02     6    ------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_69795

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           283     1e-78
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	237	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	26	25	21	4	0	84
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	47	4	0	92.2
CDR2-IMGT	102	122	21	17	4	0	81
FR3-IMGT	123	236	114	99	15	0	86.8
CDR3-IMGT (germline)	237	244	8	7	1	0	87.5
Total	N/A	N/A	243	212	31	0	87.2


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        P  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E  W
                    Query_12153  2    CCCGTCCCTCACCTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAGTG  91
V  87.2% (212/243)  IGHV4-34*01  51   ..T..................CTA..G..G......C.................C...A.C....................G........  140
                                        L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W

                                      ---------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IM
                                        I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  G  S  R  V  T  M  S  V  D  T  S  K  K  Q
                    Query_12153  92   GATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCGGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAACA  181
V  87.2% (212/243)  IGHV4-34*01  141  ..............A............CA.C.AC......C..T.....AA...............A....................C..  230
                                        I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q

                                      GT----------------------------------------------------><----------------CDR3-IMGT---------
                                        I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W  F
                    Query_12153  182  AATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTT  271
V  87.2% (212/243)  IGHV4-34*01  231  GT...........C..A......T.....................G.....C......A....---------------------------  293
                                        F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                           
D  100.0% (6/6)     IGHD6-19*01  13   ----------------------------------------------------------------......--------------------  18
J  98.0% (49/50)    IGHJ5*02     2    ---------------------------------------------------------------------------------.........  10

                                      ------>                                  
                                        D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12153  272  CGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  312
J  98.0% (49/50)    IGHJ5*02     11   .....................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_69794

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           341     5e-96
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	230	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12154  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.0% (230/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  G  T  S  K  N 
                    Query_12154  91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGGCACGTCCAAGAAC  180
V  95.0% (230/242)  IGHV4-59*01  139  ................AT........G.G...............................................A.............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_12154  181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  95.0% (230/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12154  271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_148488

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           291     5e-81
IGHD2-15*01                                                                                           14.1    8.6  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGGGGATTTCGAGAA	GGTGGTA	AATCGGTCAGT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGGGGATTTCGAGAAGGTGGTAAATCGGTCAGTTTTGCCTAC	ARDGGFREGGKSVSFAY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  S  T  Y  T  M  N  W  L  R  Q  A  P  G  K  E  P  
                    Query_12155  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGGTTCAGTACTTATACTATGAACTGGCTTCGCCAGGCTCCAGGGAAGGAGCCGC  90
V  87.2% (218/250)  IGHV3-21*01  47   ....................................CC.......GC....GC.........G.C...................G..T.G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  S  V  S  G  D  G  T  Y  I  Y  Y  A  E  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12155  91   AATGGGTCGCATCTGTGAGTGGAGATGGAACCTACATATACTACGCAGAATCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  87.2% (218/250)  IGHV3-21*01  137  .G......T....CA.T...A.TAG.A.T.GT.................C...G...................................A  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      E  N  S  V  F  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  G  G  F  R  E  G  
                    Query_12155  181  AGAACTCAGTGTTTCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCTGTCTATTATTGTGCGAGAGACGGGGGATTTCGAGAAGGTG  270
V  87.2% (218/250)  IGHV3-21*01  227  ........C...A.......................C...............G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-15*01  14   --------------------------------------------------------------------------------------....  17

                                      GT-------------------->                                  
                                      G  K  S  V  S  F  A  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_12155  271  GTAAATCGGTCAGTTTTGCCTACTGGGGCCAGGGAACCCTTGTCATCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD2-15*01  18   ...------------------------------------------------------  20
J  93.0% (40/43)    IGHJ4*02     6    --------------....A.....................G....C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_148484

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     3e-93
IGHD1-26*01                                                                                           12.2    32   
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GCCCAACAGGCA	TGGGAG	TCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGCCCAACAGGCATGGGAGTCCACTACGGCATGGACGTC	ARRPTGMGVHYGMDV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  I  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12156  1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*08  49   .....................G....................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  G  S  G  T  T  D  Y  N  A  S  F  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12156  91   TGGATTGGGTATATCTTCGGCAGTGGGACTACCGATTACAACGCCTCCTTTAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-59*08  139  ................ATTA........GC...A.C......C.....C.C.......................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  L  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  P  T  G  M  G  V  H  Y 
                    Query_12156  181  CAGTTGTCCCTGAGGCTGAACTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACGCCCAACAGGCATGGGAGTCCACTAC  270
V  93.4% (228/244)  IGHV4-59*08  229  .....C.......A.....G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-26*01  8    ----------------------------------------------------------------------------......--------  13
J  98.0% (49/50)    IGHJ6*02     13   -------------------------------------------------------------------------------------.....  17

                                      ----------->                                 
                                       G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12156  271  GGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  315
J  98.0% (49/50)    IGHJ6*02     18   ..T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_148485

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           12.2    33   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	44	6	0	88
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	47	4	0	92.2
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	100	14	0	87.7
CDR3-IMGT (germline)	261	268	8	7	1	0	87.5
Total	N/A	N/A	268	236	32	0	88.1


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  
                    Query_12157  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACTTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCC  90
V  88.1% (236/268)  IGHV4-34*01  26   ........T.......T....................C........CTA..G..G......C.................C...A.C....  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  
                    Query_12157  91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCA  180
V  88.1% (236/268)  IGHV4-34*01  116  ................G......................A............CA.C.AC......C..T......A..............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      M  S  V  D  T  S  K  K  Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_12157  181  TGTCAGTAGACACGTCCAAGAAACAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGG  270
V  88.1% (236/268)  IGHV4-34*01  206  .A....................C..GT...........C..A......T.....................G.....C......A....--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------------------.  13

                                      -------CDR3-IMGT--------------->                                  
                                      G  W  R  R  Q  R  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12157  271  GCTGGCGAAGACAGCGCAACTGGTTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  336
D  100.0% (6/6)     IGHD6-19*01  14   .....-------------------------------------------------------------  18
J  98.0% (49/50)    IGHJ5*02     2    ----------------..............................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_148487

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           380     1e-107
IGHD3-16*01                                                                                           12.2    36    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCCTTCTCCCCGGGTCCCCC	TGGGGG	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTTCTCCCCGGGTCCCCCTGGGGGCCCTTTGACTCT	ARTLLPGSPWGPFDS	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	65	9	0	87.8
CDR1-IMGT	78	101	24	18	6	0	75
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	105	9	0	92.1
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	268	25	0	91.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  A  V  R  R  P  G  E  S  L  T  T  S  C  Q  G  S  G  Y  R  V  P  
                    Query_12158  4    AGATGCAGCTGGTGCAGTCTGGAGCAGCGGTGAGAAGGCCCGGGGAGTCTCTGACGACTTCCTGTCAGGGTTCCGGATACAGAGTTCCCA  93
V  91.5% (268/293)  IGHV5-51*01  2    ..G........................A.....A..A.................A..TC......A.......T........CT..A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  H  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_12158  94   CCCATTGGATCGGGTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACA  183
V  91.5% (268/293)  IGHV5-51*01  92   G.T.C........C......................................................................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  V  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_12158  184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCTGTCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACA  273
V  91.5% (268/293)  IGHV5-51*01  182  ...............................A.C..........A...G........................C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  T  Y  F  C  A  R  T  L  L  P  G  S  P  W  G  P  F  D  S  W  G  Q  G  T  L  V  T  V  
                    Query_12158  274  CCGCCACATATTTCTGTGCGAGAACCCTTCTCCCCGGGTCCCCCTGGGGGCCCTTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCT  363
V  91.5% (268/293)  IGHV5-51*01  272  ......TG....A..........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD3-16*01  17   --------------------------------------------......----------------------------------------  22
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------........AC............................  42

                                            
                                      S  S  
                    Query_12158  364  CCTCAG  369
J  95.5% (42/44)    IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_148480

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           324     8e-91
IGHD3-3*01                                                                                            21.8    0.043
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTCTTTAATGG	CGATTATTGGAGTG	ATGATTTTCGTCGACACCTAGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCTTTAATGGCGATTATTGGAGTGATGATTTTCGTCGACACCTAGGGCTTGACAAC	ARHVFNGDYWSDDFRRHLGLDN	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	229	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  V  T  A  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_12159  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCTGTCACTGCCAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  91.2% (229/251)  IGHV4-39*01  49   ...............................G...CA...GCAGT............................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  H  T  S 
                    Query_12159  91   CTGGAGTGGATTGGAAATATCTATTATAGTGGGACCACCTACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCCGTGCACACGTCC  180
V  91.2% (229/251)  IGHV4-39*01  139  ..............G.G.................G...............G.......................A.....AG........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  H  V  F  N  G  D  Y 
                    Query_12159  181  AAGAATCAGTTCTCCCTGAGGCTGAATTCTGTGACCGCCGCAGACTCGGCTGTATATTACTGTGCGAGACATGTCTTTAATGGCGATTAT  270
V  91.2% (229/251)  IGHV4-39*01  229  .....C.............A.....GC..................A.......G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD3-3*01   7    -----------------------------------------------------------------------------------.....T.  13

                                      --CDR3-IMGT--------------------------->                                  
                                       W  S  D  D  F  R  R  H  L  G  L  D  N  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_12159  271  TGGAGTGATGATTTTCGTCGACACCTAGGGCTTGACAACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  343
D  92.9% (13/14)    IGHD3-3*01   14   .......------------------------------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    -------------------------------.....T........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_148481

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           294     7e-82
IGHD3-22*01                                                                                           14.1    8.8  
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGCCTGC	AGTAGTAATTACT	GTTATGACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGCCTGCAGTAGTAATTACTGTTATGACGACTACTTCTACGGTATGGACGTC	ARVACSSNYCYDDYFYGMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	96	18	0	84.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  T  G  N  Y  Y  W  T  W  I  R  Q  R  P  E  K  G 
                    Query_12160  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAACACTGGCAATTACTACTGGACCTGGATCCGCCAGCGCCCAGAGAAGGGC  90
V  87.6% (219/250)  IGHV4-31*03  49   ...............................G........G..G...TGG...........G..............A.....G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  N  G  I  T  Y  Y  S  P  S  L  R  G  R  I  A  I  S  V  D  R  S 
                    Query_12160  91   CTGGAGTGGATTGGATACATATATTACAATGGGATCACCTACTACAGCCCGTCCCTCCGGGGGCGAATTGCCATATCAGTAGACAGGTCT  180
V  87.6% (219/250)  IGHV4-31*03  139  ..............G.....C.......G.....G...........A..........AA.A.T...G..A...............C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  K  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  G  T  Y  Y  C  A  R  V  A  C  S  S  N  Y 
                    Query_12160  181  AAGAAACAATTCTCATTGAGGCTGAGCTCCGTGACTGCCGCGGACACGGGCACTTATTACTGTGCGAGAGTCGCCTGCAGTAGTAATTAC  270
V  87.6% (219/250)  IGHV4-31*03  229  .....C..G.....CC...A.........T...................C.GTG................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  84.6% (11/13)    IGHD3-22*01  17   ------------------------------------------------------------------------------...G..T.....  28

                                      DR3-IMGT------------------------>                                 
                                       C  Y  D  D  Y  F  Y  G  M  D  V  W  G  P  G  T  T  V  T  V  S  S 
                    Query_12160  271  TGTTATGACGACTACTTCTACGGTATGGACGTCTGGGGCCCAGGGACCACGGTCACCGTCTCCTCA  336
D  84.6% (11/13)    IGHD3-22*01  29   .-----------------------------------------------------------------  29
J  96.4% (54/56)    IGHJ6*02     7    ----------......A.......................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_148482

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           343     2e-96
IGHD1-26*01                                                                                           19.9    0.16 
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAATATTGTCA	TGGGAGCTAC	GCCG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAATATTGTCATGGGAGCTACGCCGTGATGTTTTTGATATC	ARGILSWELRRDVFDI	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  Y  T  F  S  G  F  S  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12161  1    GGTCCCTGAGACTCTCCTGTGCTGCCTCTGGATACACATTCAGTGGTTTTAGCATCAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (233/247)  IGHV3-21*01  47   ......................A..........T...C......A.C.A......G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  G  S  D  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_12161  91   AGTGGGTCTCATCCATTAGTGGTGGTAGTGATTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  94.3% (233/247)  IGHV3-21*01  137  ....................A..A.....AG........................................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  I  L  S  W  E  L  
                    Query_12161  181  AGAACTCACTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGGGGAATATTGTCATGGGAGCTAC  270
V  94.3% (233/247)  IGHV3-21*01  227  ..........G.........................................G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD1-26*01  8    --------------------------------------------------------------------------------..........  17

                                      T------------------>                                  
                                      R  R  D  V  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12161  271  GCCGTGATGTTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
J  98.0% (49/50)    IGHJ3*02     1    ----.....C............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_148483

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           367     5e-104
IGHD3-3*01                                                                                            39.1    2e-07 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	T	TTACGATTTTTTGAGTGGTTATT	N/A	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATTTACGATTTTTTGAGTGGTTATTACTTC	AIYDFLSGYYF	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	238	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12162  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (238/241)  IGHV4-34*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12162  91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTGAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (238/241)  IGHV4-34*01  139  ..................................................C.......................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  I  Y  D  F  L  S  G  Y  Y  F 
                    Query_12162  181  CAGTTCTCCCTGAAACTGAGCTCTCTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGATTTACGATTTTTTGAGTGGTTATTACTTC  270
V  98.8% (238/241)  IGHV4-34*01  229  ..............G.........G....................................-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.7% (22/23)    IGHD3-3*01   4    --------------------------------------------------------------...........G...........-----  26
J  97.4% (38/39)    IGHJ4*02     10   -------------------------------------------------------------------------------------...A.  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12162  271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  97.4% (38/39)    IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_116388

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12163  1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T..........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  R  S  E 
                    Query_12163  91   GAGTGGATTGGGGAGATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCAAGTCTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ..............A....A..A..............A...................AG............A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  M  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_12163  181  AACCAGTTCTCCCTGATGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................A.....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12163  271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_337395

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           369     2e-104
IGHD5-12*01                                                                                           12.2    32    
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATAGGGCAATTCCAGCCCC	GCTACG	CA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATAGGGCAATTCCAGCCCCGCTACGCATTTGACTAC	ARIGQFQPRYAFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12164  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.6% (242/248)  IGHV3-48*03  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  A  Y  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12164  91   AGTGGGTTTCATACATCAGTAGTAGTGCTTATACCATATACTACGCAGATTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (242/248)  IGHV3-48*03  137  ................T..........G.AG..................C........................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  I  G  Q  F  Q  P  R  
                    Query_12164  181  AGAACTCACTCTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAATAGGGCAATTCCAGCCCCGCT  270
V  97.6% (242/248)  IGHV3-48*03  227  ..........G.........................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD5-12*01  13   ---------------------------------------------------------------------------------------...  15

                                      ------------->                                  
                                      Y  A  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_12164  271  ACGCATTTGACTACTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTCAG  318
D  100.0% (6/6)     IGHD5-12*01  16   ...---------------------------------------------  18
J  97.7% (42/43)    IGHJ4*02     6    -----......................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_337396

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            442     2e-126
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	287	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_12165  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  98.6% (287/291)  IGHV1-2*04   6    ..................G.............AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_12165  91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.6% (287/291)  IGHV1-2*04   96   ..........................................................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_12165  181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  98.6% (287/291)  IGHV1-2*04   186  ..........................................................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W  G  Q
                    Query_12165  271  CGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGGGGCCA  360
V  98.6% (287/291)  IGHV1-2*04   276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------------------....A...........................  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_12165  361  AGGGACCACGGTCACCGTCTCCTCA  385
J  98.2% (56/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_337397

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD2-15*01                                                                                           16.1    2.3  
IGHJ5*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	TCAGCAGGTTGGCTGCGTGACTCC	GCTACTCC	CCGTGTT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATCAGCAGGTTGGCTGCGTGACTCCGCTACTCCCCGTGTTAACTGGTTCGACCCC	AKSAGWLRDSATPRVNWFDP	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  A  G  F  A  F  G  T  Y  A  M  N  W  V  R  Q  A  P  G  T  G  L  
                    Query_12166  1    GGTCCCTGAGACTCTCCTGTGCAGCCGCTGGATTCGCCTTTGGCACCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGACGGGGCTGG  90
V  93.1% (231/248)  IGHV3-23*01  47   ..........................T........A.....A...G...........G.......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  D  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12166  91   AGTGGGTCTCAAGTATCAGTGGTAGTGGTGATGGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.1% (231/248)  IGHV3-23*01  137  ...........GC...T.............G.A.........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  L  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  S  A  G  W  L  R  D  
                    Query_12166  181  AGAACACGCTACTCCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATTTATTACTGTGCGAAATCAGCAGGTTGGCTGCGTGACT  270
V  93.1% (231/248)  IGHV3-23*01  227  ..........GTAT....................................G.A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      R3-IMGT------------------------>                                  
                                      S  A  T  P  R  V  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12166  271  CCGCTACTCCCCGTGTTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  100.0% (8/8)     IGHD2-15*01  24   --........--------------------------------------------------------  31
J  100.0% (49/49)   IGHJ5*02     3    -----------------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_337390

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD1-1*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAGGGGG	CAACTGG	GACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTCC	ARGGGNWDPFDS	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	46	5	0	90.2
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	294	5	5	0	0	100
Total	N/A	N/A	292	272	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_12167  3    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCG  92
V  93.2% (272/292)  IGHV5-51*01  2    ....G................................................................G............C......A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      A  Y  W  I  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  V  V  Y  P  D  D  S  D  A  R  Y  
                    Query_12167  93   CCTACTGGATCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGGTCGTCTATCCTGATGACTCTGATGCCAGATACA  182
V  93.2% (272/292)  IGHV5-51*01  92   G.....................C..G.........A..........G.........A..A.........G..........A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  H  I  T  I  S  A  D  K  S  I  S  T  A  F  L  Q  W  N  S  L  K  A  S  D  
                    Query_12167  183  GCCCGTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCATCGGACA  272
V  93.2% (272/292)  IGHV5-51*01  182  ...........C.......GG....................................A...........G............C.......  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  I  Y  Y  C  A  R  G  G  G  N  W  D  P  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12167  273  CCGCCATCTATTACTGTGCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.2% (272/292)  IGHV5-51*01  272  .......G..............-----------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    -------------------------------.......-------------------------------------------------  11
J  97.7% (43/44)    IGHJ4*02     5    -------------------------------------------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_337393

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            305     3e-85
IGHD3-9*01                                                                                            14.1    8.6  
IGHJ5*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-9*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAGA	GCTGGCTGGCAGAGG	TTTGACT	AAG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCATCAGAGCTGGCTGGCAGAGGTTTGACTAAGTGGTTCGACTCC	ASELAGRGLTKWFDS	250	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	23	4	0	85.2
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	135	27	23	4	0	85.2
FR3-IMGT	136	249	114	101	13	0	88.6
CDR3-IMGT (germline)	250	257	8	6	2	0	75
Total	N/A	N/A	257	226	31	0	87.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  I  S  G  D  S  V  S  T  I  S  I  A  W  T  W  I  R  Q  S  P  S  R  G 
                    Query_12168  1    ACCCTGTCCCTCACCTGCGCCATTTCCGGGGACAGTGTCTCTACCATCAGTATTGCTTGGACCTGGATCAGGCAGTCCCCGTCGAGAGGC  90
V  87.9% (226/257)  IGHV6-1*01   49   .....C..A........T.....C...................G..A....GC........A..................A.........  138
                                       T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R  Q  S  P  S  R  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  L  G  N  I  F  Y  R  S  K  W  I  N  D  Y  A  V  S  F  E  S  R  I  T  I  N  A  D 
                    Query_12168  91   CTTGAGTGGCTGGGAAACATATTCTACAGGTCCAAGTGGATTAATGATTATGCAGTCTCTTTTGAGAGCCGCATAACCATCAACGCGGAC  180
V  87.9% (226/257)  IGHV6-1*01   139  ................GG.C..A................TA...............A...G.GA.A..T..A............C.A...  228
                                       L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R  I  T  I  N  P  D 

                                      --------FR3-IMGT----------------------------------------------------><-----------------CDR
                                       T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A  S  E  L  A  G  R 
                    Query_12168  181  ACATCCAAGAATCAGTTTTCCCTGCAGTTGAACTCTGTGACTCCCGAGGACACGGCTGTTTATTACTGTGCATCAGAGCTGGCTGGCAGA  270
V  87.9% (226/257)  IGHV6-1*01   229  ...........C.....C.........C...............................G............AG...-------------  305
                                       T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A  R                

                                      3-IMGT----------------->                                  
                                       G  L  T  K  W  F  D  S  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_12168  271  GGTTTGACTAAGTGGTTCGACTCCTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  328
D  100.0% (7/7)     IGHD3-9*01   13   --.......-------------------------------------------------  19
J  95.7% (44/46)    IGHJ5*01     6    ------------....................A............A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_116380

Length=318
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           290     1e-80
IGHD6-25*01                                                                                           12.2    29   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-25*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGGG	GCATCGGCT	GAGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGGGCATCGGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	230	262	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	20	4	0	83.3
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	21	3	0	87.5
FR3-IMGT	116	229	114	106	8	0	93
Total	N/A	N/A	217	201	16	0	92.6


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  E  V  I  W  H  D
                    Query_12169  13   GTCTGGATTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGAAGTTATATGGCATGA  102
V  92.6% (201/217)  IGHV3-33*03  72   ............C..C.....C.....C..............................................C..........T....  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  I  K  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  F  L  Q  M  N
                    Query_12169  103  TGGAATTAAAAAATACTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCAAGAACACCCTGTTTCTGCAGATGAA  192
V  92.6% (201/217)  IGHV3-33*03  162  .....G...T..........C.....................................A.............G....A......A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------CDR3-IMGT----------->                    
                                        S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  D  P  W  G  Q  G  T  L  V
                    Query_12169  193  CAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGGGCATCGGCTGAGGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  282
V  92.6% (201/217)  IGHV3-33*03  252  .........................G.G.....C...-----------------------------------------------------  288
                                        S  L  R  A  E  D  T  A  V  Y  Y  C                                                      
D  88.9% (8/9)      IGHD6-25*01  8    -------------------------------------------...G.....--------------------------------------  16
J  100.0% (46/46)   IGHJ5*02     6    ----------------------------------------------------------................................  37

                                                    
                                        T  V  S  S  
                    Query_12169  283  CACCGTCTCCTCAG  296
J  100.0% (46/46)   IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30726981


Query= Query_187498

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            300     8e-84
IGHD6-13*01                                                                                           14.1    8.6  
IGHJ5*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAGGAC	TAGCACCACCTGG	AGCGGGAACAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGACTAGCACCACCTGGAGCGGGAACATACAACTGGTTCGACCCC	ARLGLAPPGAGTYNWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	14	10	0	58.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	220	28	0	88.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  S  F  T  F  S  D  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12170  1    GGTCCCTGAGACTCTCCTGTACAGCCTCCTCGTTCACTTTCAGTGACGCCTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  88.7% (220/248)  IGHV3-7*01   47   ....................G.......TGGA.....C..T...AG.TAT........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  H  I  N  Q  D  A  S  D  H  Y  Y  L  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_12170  91   AGTGGGTGGCCCACATAAATCAAGATGCAAGTGACCACTACTATCTGGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  88.7% (220/248)  IGHV3-7*01   137  ...........A.......G.......G......GA.A......G..........................A..................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  S  S  V  F  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  A  R  L  G  L  A  P  P  G  
                    Query_12170  181  AGAGTTCAGTGTTTCTGCAAATGAACAGCCTGACAGCCGAAGACACGGCTGTTTATTACTGTGCGAGACTAGGACTAGCACCACCTGGAG  270
V  88.7% (220/248)  IGHV3-7*01   227  ...AC...C...A....................G......G...........G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.6% (11/13)    IGHD6-13*01  6    ---------------------------------------------------------------------------.....G..G....--  18

                                      IMGT--------------------->                                  
                                      A  G  T  Y  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12170  271  CGGGAACATACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
J  100.0% (51/51)   IGHJ5*02     1    ---------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_116382

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           385     4e-109
IGHD3-10*02                                                                                           14.1    9.4   
IGHJ2*01                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*02	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	N/A	TGTTCGTGGA	TCCCGAAGAGGGA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTGTTCGTGGATCCCGAAGAGGGATACTTCGATCTC	AKVFVDPEEGYFDL	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y
                    Query_12171  1    GCAGCTGGTGCAGTCTGGAGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTACCTTCAGCAGCTA  90
V  92.4% (268/290)  IGHV3-30*18  6    ..........G.......G........................................................C........T.....  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  S  H  D  G  S  K  K  Y  F  A  D
                    Query_12171  91   TGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCTCTCATATCACATGATGGAAGTAAAAAATACTTTGCGGA  180
V  92.4% (268/290)  IGHV3-30*18  96   ...................................................AG.T......T.............T.......A...A..  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  K  T  L  Y  L  Q  M  S  S  V  R  S  E  D  T  A
                    Query_12171  181  CTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCTAAGAAAACGTTGTATCTGCAAATGAGCAGCGTGAGAAGTGAAGACACGGC  270
V  92.4% (268/290)  IGHV3-30*18  186  ...C...................................C.....C...C...............A....C.....GC...G........  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  K  V  F  V  D  P  E  E  G  Y  F  D  L  W  G  R  C  T  L  V  V  V  S  S  
                    Query_12171  271  TGTCTATTATTGTGCGAAAGTGTTCGTGGATCCCGAAGAGGGATACTTCGATCTCTGGGGCCGTTGCACCCTGGTCGTTGTCTCCTCAG  359
V  92.4% (268/290)  IGHV3-30*18  276  ...G.....C..........---------------------------------------------------------------------  295
                                        V  Y  Y  C  A  K                                                                       
D  90.0% (9/10)     IGHD3-10*02  10   --------------------......G...-----------------------------------------------------------  19
J  93.5% (43/46)    IGHJ2*01     8    -------------------------------------------.....................G...........AC...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_116383

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           276     3e-76
IGHD5-18*01                                                                                           14.1    8.2  
IGHJ5*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TTGTC	GGATACA	CCTCTCTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTGTCGGATACACCTCTCTCGACTGGTTCGACCCC	VVGYTSLDWFDP	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	30	21	6	3	70
FR2-IMGT	55	105	51	45	6	0	88.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	241	1	1	0	0	100
Total	N/A	N/A	244	212	29	3	86.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  R  V  S  G  G  S  I  S  D  S     H  W  W  N  W  V  R  Q  P  P  G  E  G 
                    Query_12172  1    ACCCTGTCCCTCACCTGCCGTGTCTCTGGTGGCTCCATCAGCGACAGTC---ACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGGAGGGG  87
V  86.9% (212/244)  IGHV4-39*01  49   ..................AC......................AGT...AGTT...AC...GGC...A.................A.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  Y  Y  P  E  S  P  Y  Y  N  P  S  L  N  Y  R  V  T  M  S  V  D  T  P 
                    Query_12172  88   CTGGAGTGGCTTGGGAGTATCTATTATCCTGAGAGCCCCTACTACAACCCGTCCCTCAATTATCGAGTCACCATGTCCGTAGACACGCCC  177
V  86.9% (212/244)  IGHV4-39*01  139  .........A.................AG..G....A......................GAG............A............T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  D  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  G  Y  T  S  L  D  W 
                    Query_12172  178  AAGAACCAGTTCTCCCTGAGACTTGACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGTTGTCGGATACACCTCTCTCGACTGG  267
V  86.9% (212/244)  IGHV4-39*01  229  ...................AG..GAG...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (7/7)     IGHD5-18*01  3    ---------------------------------------------------------------------.......--------------  9
J  100.0% (48/48)   IGHJ5*02     4    -------------------------------------------------------------------------------------.....  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12172  268  TTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (48/48)   IGHJ5*02     9    ...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_116384

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           349     3e-98
IGHD3-16*01                                                                                           18.0    0.64 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	278	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	277	114	95	13	6	83.3
CDR3-IMGT (germline)	278	283	6	6	0	0	100
Total	N/A	N/A	289	258	25	6	89.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P  R  Y
                    Query_12173  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCCGTTA  90
V  89.3% (258/289)  IGHV5-51*03  6    .......................................................T.....A....T..........GC..TA..A.C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_12173  91   TTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGTCC  180
V  89.3% (258/289)  IGHV5-51*03  96   C........C.......................................................G.....................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D  T  A
                    Query_12173  181  GGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACACTGC  264
V  89.3% (258/289)  IGHV5-51*03  186  .T.....C.A...................C...C........CAGCACC.C...............C..C.................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12173  265  CATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  353
V  89.3% (258/289)  IGHV5-51*03  276  ...G........T......----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD3-16*01  18   --------------------........T...---------------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    ---------------------------------------......T......G.................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_116385

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           402     3e-114
IGHD2-15*01                                                                                           10.3    134   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAGA	CCCGAGAAG	GGTGG	CGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGACCCGAGAAGGGTGGCGGGGCGAACGACTAC	VRPEKGGGANDY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	73	1	0	98.6
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	294	6	4	2	0	66.7
Total	N/A	N/A	293	275	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P  
                    Query_12174  2    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCCA  91
V  93.9% (275/293)  IGHV5-51*03  2    ....G............................................................................GC...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  A  D  S  D  T  R  Y  
                    Query_12174  92   ATTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAACATCTATCCTGCTGACTCTGACACCAGATACA  181
V  93.9% (275/293)  IGHV5-51*03  92   GC.......................................................T...........G.........T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  L  T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_12174  182  GTCTGACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACA  271
V  93.9% (275/293)  IGHV5-51*03  182  .C.C.T.....C.............................................................C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                
                                      T  A  V  Y  Y  C  V  R  P  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12174  272  CCGCCGTGTATTATTGTGTCAGACCCGAGAAGGGTGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  356
V  93.9% (275/293)  IGHV5-51*03  272  .....A.......C....CG...--------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                               
D  100.0% (5/5)     IGHD2-15*01  14   --------------------------------.....------------------------------------------------  18
J  97.4% (37/38)    IGHJ4*02     9    -----------------------------------------------....................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_116387

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_12175  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_12175  91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_12175  181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_12175  271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_17659

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            378     3e-107
IGHD1-26*01                                                                                           12.2    35    
IGHJ5*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y
                    Query_12176  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACCACTTA  90
V  91.7% (266/290)  IGHV1-8*01   6    ..................G...............................................T........C..........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F  A  Q
                    Query_12176  91   TGATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTTGCACA  180
V  91.7% (266/290)  IGHV1-8*01   96   .................................A..G..............A..............C.G...T..........A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D  T  A
                    Query_12176  181  GAGATTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGACACGGC  270
V  91.7% (266/290)  IGHV1-8*01   186  ..AG...C............................C.....A.................GC............G..C..AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  A  T  V  S  S 
                    Query_12176  271  CATATATTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGCCACCGTCTCCTCA  352
V  91.7% (266/290)  IGHV1-8*01   276  .G.G................--------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   -----------------------------...G.....--------------------------------------------  18
J  97.5% (39/40)    IGHJ5*02     11   ------------------------------------------..........................T.............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_17658

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           382     3e-108
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTTCG	GCAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTCGGCAGCAGCTGACTGACTAC	ARDFRQQLTDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12177  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  G  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12177  91   AGTGGGTCTCATCCATTAGTAGTAGTGGTACTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.8% (247/250)  IGHV3-21*01  137  ..........................A...G...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  R  Q  Q  L  T  
                    Query_12177  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCTGTGTATTACTGTGCGAGAGATTTTCGGCAGCAGCTGACTG  270
V  98.8% (247/250)  IGHV3-21*01  227  ........................................G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD6-13*01  8    ----------------------------------------------------------------------------..........----  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12177  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (41/41)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_17657

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    116  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_12178  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_12178  91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_12178  181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_12178  271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_17655

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     3e-90
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	242	26	6	88.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_12179  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.3% (242/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_12179  91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.3% (242/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_12179  181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.3% (242/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_12179  271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.3% (242/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_17654

Length=314
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            350     7e-99
IGHD2-8*01                                                                                            12.2    29   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-8*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	TGGTGT	GCGG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGGTGTGCGG	EWCA	244	258	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	105	52	50	1	1	96.2
CDR2-IMGT	106	129	24	23	1	0	95.8
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	238	9	1	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><---------------------FR2-IMGT-------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  S  W  M  S  W  V  R  Q  A  P  G  K  G  A  
                    Query_12180  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAACAGTTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGGCTG  90
V  96.0% (238/248)  IGHV3-7*01   47   .............................................G.TA.........C...........................-...  135
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G   L 

                                      --------------><-------CDR2-IMGT------><--------------------------------------------------
                                      G  V  G  G  Q  H  K  A  R  W  K  *  E  I  L  C  G  L  C  E  G  P  I  H  H  L  Q  R  Q  R  
                    Query_12180  91   GAGTGGGTGGCCAACATAAAGCCAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCC  180
V  96.0% (238/248)  IGHV3-7*01   136  ......................A...................................................................  225
                                       E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A 

                                      --FR3-IMGT----------------------------------------------------><--CDR3-IMGT-->            
                                      Q  K  L  T  V  S  A  N  E  Q  P  E  S  R  G  H  G  C  V  L  L  C  E  W  C  A  V  G  P  G  
                    Query_12180  181  AAAAGCTCACTGTTTCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGTGGTGTGCGGTGGGGCCAGGGA  270
V  96.0% (238/248)  IGHV3-7*01   226  ..G.A........A.......................C..............................----------------------  293
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                         
D  100.0% (6/6)     IGHD2-8*01   16   --------------------------------------------------------------------......----------------  21
J  100.0% (34/34)   IGHJ4*02     15   ------------------------------------------------------------------------------............  26

                                                            
                                      N  P  G  H  R  L  L   
                    Query_12180  271  ACCCTGGTCACCGTCTCCTCAG  292
J  100.0% (34/34)   IGHJ4*02     27   ......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30304617


Query= Query_17653

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           330     1e-92
IGHD2-2*01                                                                                            18.0    0.62 
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGGGGGGGGGG	ATTGCAGTAGTA	AAACCTGCC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGGGGGGGGGGATTGCAGTAGTAAAACCTGCCACTTCTCCTACGGTCTGGACGTC	TRSGGGDCSSKTCHFSYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  R  V  G  Y  Y  W  N  W  V  R  Q  H  P  G  K  G 
                    Query_12181  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATCGTGTCGGTTACTACTGGAACTGGGTCCGCCAGCACCCCGGGAAGGGC  90
V  92.4% (230/249)  IGHV4-31*01  49   ........................................GCA...GT.............G....A.............A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  R  I  Y  Y  N  P  S  L  K  S  L  V  T  M  S  V  D  T  S 
                    Query_12181  91   CTGGAGTGGATTGGGTACATCTATTACGGTGGGAGGATCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATGTCAGTAGACACGTCT  180
V  92.4% (230/249)  IGHV4-31*01  139  ...........................A.......C.C....................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  V  N  S  V  S  P  A  D  T  A  V  Y  Y  C  T  R  S  G  G  G  D  C  S 
                    Query_12181  181  AAGAACCAGTTCTCCCTGAAGGTGAATTCTGTGAGTCCCGCGGACACGGCCGTCTATTACTGTACGAGATCAGGGGGGGGGGATTGCAGT  270
V  92.4% (230/249)  IGHV4-31*01  229  .....................C...GC.......C.G................G.........G.....---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD2-2*01   6    ----------------------------------------------------------------------------------....T...  13

                                      CDR3-IMGT-------------------------->                                 
                                       S  K  T  C  H  F  S  Y  G  L  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_12181  271  AGTAAAACCTGCCACTTCTCCTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  339
D  91.7% (11/12)    IGHD2-2*01   14   ....-----------------------------------------------------------------  17
J  92.9% (52/56)    IGHJ6*02     7    -------------...A..A.......A.............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_17651

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           327     9e-92
IGHD6-6*01                                                                                            19.9    0.15 
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-6*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCC	AGTATAGAAGATCGTC	GGCTGGT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCAGTATAGAAGATCGTCGGCTGGTTGCTTTTGATATC	ARPSIEDRRLVAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  R  G  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  Q 
                    Query_12182  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGGGGTTACTACTGGAGCTGGGTCCGTCAGCCCCCAGGGAAGGGGCTGCAG  90
V  93.0% (226/243)  IGHV4-34*01  49   .........................................T..................A....C.....................G..  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  I  N  H  R  G  S  S  Y  H  S  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_12182  91   TGGCTTGGCGAAATCAACCATAGAGGAAGTAGCTATCACAGCCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGTCCAAGAAC  180
V  93.0% (226/243)  IGHV4-34*01  139  ...A....G........T.....T.....C.C.A.CT...A...........................A.....A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  S  I  E  D  R  R  L  V 
                    Query_12182  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGACCCAGTATAGAAGATCGTCGGCTGGTT  270
V  93.0% (226/243)  IGHV4-34*01  229  ...............................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (14/16)    IGHD6-6*01   2    ------------------------------------------------------------------.......C..C.....--------  17
J  100.0% (47/47)   IGHJ3*02     4    -----------------------------------------------------------------------------------------.  4

                                      ----------->                                  
                                       A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12182  271  GCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  316
J  100.0% (47/47)   IGHJ3*02     5    ..............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_245619

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACAGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	268	18	0	93.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_12183  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  93.7% (268/286)  IGHV5-51*01  6    ..............................A...................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  Q  G  L  E  L  M  G  L  I  Y  P  G  D  S  D  T  W  Y  S  P
                    Query_12183  91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCAAGGCCTGGAGTTGATGGGGCTCATCTATCCTGGTGACTCTGATACCTGGTACAGTCC  180
V  93.7% (268/286)  IGHV5-51*01  96   ......................A........A............G.......A..........................A.A.....C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  T  S  A  Y  L  Q  W  T  T  L  K  A  S  D  T  A
                    Query_12183  181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCACCTCCGCCTACCTGCAGTGGACCACCCTGAAGGCCTCGGACACCGC  270
V  93.7% (268/286)  IGHV5-51*01  186  ....................C...................A...G.A..................G..G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12183  271  CATTTACTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACAGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  353
V  93.7% (268/286)  IGHV5-51*01  276  ...G..T.........-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------.................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_223082

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            333     1e-93
IGHD6-6*01                                                                                            21.8    0.042
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGTCGA	ATACCAGCTCGTCC	ACGAGGAAAGTCGG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGTCGAATACCAGCTCGTCCACGAGGAAAGTCGGACTTTGACTAC	ARSRIPARPRGKSDFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	25	2	0	92.6
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  G  V  S  G  G  S  I  S  S  D  N  W  W  G  W  V  R  Q  P  P  G  K  G  
                    Query_12184  1    GGTCCCTGAGACTCTCCTGCGGTGTCTCTGGTGGCTCCATCAGCAGTGATAACTGGTGGGGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  93.1% (230/247)  IGHV4-4*02   47   ..A.....TCC...A......C.........................AG..........A..............................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  T  G  S  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  
                    Query_12184  91   TGGAGTGGATTGGGGAGATCTATCATACTGGGAGCACCAGCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTCGACAAGTCCA  180
V  93.1% (230/247)  IGHV4-4*02   137  ................A..........G...........A.......................................A..........  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  Q  F  S  L  N  L  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  S  R  I  P  A  R  P  
                    Query_12184  181  AGAACCAGTTCTCCCTGAACCTGACGTCTGTGACCGCCGCGGACACGGCCATGTATTACTGTGCGAGGAGTCGAATACCAGCTCGTCCAC  270
V  93.1% (230/247)  IGHV4-4*02   227  ...................G....GC........................G................-----------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD6-6*01   5    --------------------------------------------------------------------------...G..........--  18

                                      GT-------------------->                                  
                                      R  G  K  S  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12184  271  GAGGAAAGTCGGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (45/45)   IGHJ4*02     4    ------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_223083

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           329     3e-92
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTACGGGTCGGGAAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCCTCTATTACTACGGGTCGGGAAGTTATTTTGACTCC	VRGLYYYGSGSYFDS	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  S  G  K  G 
                    Query_12185  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCGGCAGTGGTGGTTATTACTGGAGCTGGATTCGCCAGCACTCAGGGAAGGGC  90
V  92.0% (230/250)  IGHV4-31*03  49   ...............................G.......A.............C..............C.........C...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  V  G  H  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_12185  91   CTGGAGTGGGTCGGGCACATTTATTACAGTGGGACTACCTACTACAACCCGTCCCTCAAGAGTCGAGTTTCCATTTCAGTGGACACGTCT  180
V  92.0% (230/250)  IGHV4-31*03  139  .........A.T...T....C.............GC.................................A....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  F  N  S  V  T  A  A  D  T  A  V  Y  H  C  V  R  G  L  Y  Y  Y  G  S 
                    Query_12185  181  AAGAATCAGTTCTCCCTGAAGTTCAACTCTGTGACTGCCGCGGACACGGCCGTGTATCACTGTGTGAGAGGCCTCTATTACTACGGGTCG  270
V  92.0% (230/250)  IGHV4-31*03  229  .....C...............C.G.G...............................T......C.....--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  87.5% (21/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------........T..T...  16

                                      ----------------->                                  
                                       G  S  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12185  271  GGAAGTTATTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  87.5% (21/24)    IGHD3-10*01  17   ..G......-------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_223081

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           336     1e-94
IGHD3-9*01                                                                                            35.3    4e-06
IGHJ4*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GAATCCCCCCGCGAGTCCC	TACGATATGTTGACTGGATATTAT	CGGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGAATCCCCCCGCGAGTCCCTACGATATGTTGACTGGATATTATCGGTTCTACTTTGACTAC	AKNPPASPYDMLTGYYRFYFDY	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12186  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTACCTTTAGCAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  93.5% (231/247)  IGHV3-23*01  47   ..................................C...........C......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  L  S  G  R  G  G  S  S  Y  Y  A  D  S  V  K  G  R  C  T  I  S  R  D  N  S  
                    Query_12186  91   AGTGGGTCTCACATTTGAGTGGTCGTGGTGGCAGTTCATACTACGCAGATTCCGTGAAGGGCCGGTGCACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-23*01  137  ...........GC.A.T......A.......T..CA.............C................T.......................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  K  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  N  P  P  A  S  P  Y  
                    Query_12186  181  AGAAGACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTTTATTACTGTGCGAAGAATCCCCCCGCGAGTCCCTACG  270
V  93.5% (231/247)  IGHV3-23*01  227  ....C.............................................G.A..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  91.7% (22/24)    IGHD3-9*01   5    --------------------------------------------------------------------------------------....  8

                                      -CDR3-IMGT--------------------------->                                  
                                      D  M  L  T  G  Y  Y  R  F  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_12186  271  ATATGTTGACTGGATATTATCGGTTCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  342
D  91.7% (22/24)    IGHD3-9*01   9    ....T........T......----------------------------------------------------  28
J  97.9% (46/47)    IGHJ4*02     2    -------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_223086

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           431     4e-123
IGHD2-2*02                                                                                            19.9    0.18  
IGHJ5*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAAAGTGGCGGGGA	ACCAGCTGTTATA	AAGATCGCTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGATCGCTGCTGGTTCGACCCC	ARGKWRGTSCYKDRCWFDP	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	112	2	0	98.2
CDR3-IMGT (germline)	290	294	5	5	0	0	100
Total	N/A	N/A	292	284	8	0	97.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  E  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_12187  3    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGAGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCA  92
V  97.3% (284/292)  IGHV5-51*03  2    ....G.........................T......................................G............C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  R  Y  
                    Query_12187  93   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATAATCTATCCTGGTGACTCTGAGACCAGATACA  182
V  97.3% (284/292)  IGHV5-51*03  92   ..........................................................C....................T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_12187  183  GACCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  97.3% (284/292)  IGHV5-51*03  182  .C........................................................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  M  Y  Y  C  A  R  G  K  W  R  G  T  S  C  Y  K  D  R  C  W  F  D  P  W  G  Q  G  T  
                    Query_12187  273  CCGCCATGTATTATTGTGCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGATCGCTGCTGGTTCGACCCCTGGGGCCAGGGAACCC  362
V  97.3% (284/292)  IGHV5-51*03  272  .............C........--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  92.3% (12/13)    IGHD2-2*02   17   --------------------------------------........C....---------------------------------------  29
J  100.0% (47/47)   IGHJ5*02     5    -------------------------------------------------------------.............................  33

                                                        
                                      L  V  T  V  S  S  
                    Query_12187  363  TGGTCACCGTCTCCTCAG  380
J  100.0% (47/47)   IGHJ5*02     34   ..................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_223084

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            347     7e-98
IGHD4-17*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AC	ACGGTGACTAC	CGATTCTACTACAATTGCCCCGGAC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAACACGGTGACTACCGATTCTACTACAATTGCCCCGGACTGGACGTC	VREHGDYRFYYNCPGLDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  Y  T  F  S  A  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_12188  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATACACCTTTAGTGCCTATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-7*03   47   ....................G............T..........AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  R  V  A  N  I  K  Q  D  G  N  E  K  H  Y  V  G  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12188  91   AACGGGTGGCCAACATAAAACAAGATGGAAATGAGAAACACTATGTGGGCTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-7*03   137  .GT................G..........G.......T.........A...............A.........................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  E  H  G  D  Y  R  F  
                    Query_12188  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGTGAGAGAACACGGTGACTACCGATTCT  270
V  94.4% (236/250)  IGHV3-7*03   227  ....................................................G..........C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD4-17*01  6    ------------------------------------------------------------------------...........-------  16

                                      IMGT--------------------->                                 
                                      Y  Y  N  C  P  G  L  D  V  W  G  Q  G  T  T  F  T  G  S  S 
                    Query_12188  271  ACTACAATTGCCCCGGACTGGACGTCTGGGGCCAAGGGACCACGTTCACCGGCTCCTCA  329
J  95.1% (39/41)    IGHJ6*02     22   ------------------..........................G......T.......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_223085

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           318     6e-89
IGHD6-6*01                                                                                            10.3    122  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCGGCCGCAATGT	GCTCG	CCCAAGACAGGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAAAGTCGGCCGCAATGTGCTCGCCCAAGACAGGTACTACTTTGACTAC	TKVGRNVLAQDRYYFDY	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	24	18	3	3	75
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	249	228	18	3	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  L  G  T  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12189  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCCGGATTCACACTTGGCACCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-23*01  47   .....................C......T........CT..A...G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  G  G  S  G  T     T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12189  91   AGTGGGTCTCAACCATTGGTGGTAGTGGTACTA---CATACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAATTCCA  177
V  91.6% (228/249)  IGHV3-23*01  137  ...........G.T...A...........GG..GCA............................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  T  K  V  G  R  N  V  L  A  
                    Query_12189  178  GGAACACCCTGTATCTGCAAATGAACAGCCTGACAGCCGAGGACACGGCCGTATATTATTGTACGAAAGTCGGCCGCAATGTGCTCGCCC  267
V  91.6% (228/249)  IGHV3-23*01  227  A......G.........................G........................C...G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD6-6*01   11   ----------------------------------------------------------------------------------.....---  15

                                      GT-------------------->                                  
                                      Q  D  R  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12189  268  AAGACAGGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (48/48)   IGHJ4*02     1    ---------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_223088

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            276     3e-76
IGHD3-10*01                                                                                           12.2    32   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	96	18	0	84.2
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	211	35	0	85.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12190  1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  85.8% (211/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  S  M  S  V  D  K  S  K 
                    Query_12190  91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCAGCATGTCAGTAGACAAGTCCAAG  180
V  85.8% (211/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A............C...A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  N  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_12190  181  AATCAATTCTCCCTCACGCTGACGTCTCTGAACGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  85.8% (211/246)  IGHV4-4*01   229  ..C..G........G.A.....GC...G...C..................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_12190  271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_223089

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD2-15*01                                                                                           10.3    132   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CGAGAAG	GGTGG	CGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGACACGAGAAGGGTGGCGGGGCGAACGACTAC	VRHEKGGGANDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	6	2	0	75
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P  N  Y
                    Query_12191  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCCAATTA  90
V  93.8% (273/291)  IGHV5-51*01  6    ....................................C........................................GC...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  A  D  S  D  T  R  Y  S  L
                    Query_12191  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAACATCTATCCTGCTGACTCTGACACCAGATACAGTCT  180
V  93.8% (273/291)  IGHV5-51*01  96   .....................................................T...........G.........T...........C.C  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12191  181  GACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACACCGC  270
V  93.8% (273/291)  IGHV5-51*01  186  .T.....C.............................................................C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12191  271  CGTGTATTATTGTGTCAGACACGAGAAGGGTGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  351
V  93.8% (273/291)  IGHV5-51*01  276  .A.......C....CG.....------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                               
D  100.0% (5/5)     IGHD2-15*01  14   ----------------------------.....------------------------------------------------  18
J  97.4% (37/38)    IGHJ4*02     9    -------------------------------------------....................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_111288

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           350     8e-99
IGHD2-2*02                                                                                            10.3    114  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	C	ATACC	TGACCCCGGG	GACAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCATACCTGACCCCGGGGACACC	AIPDPGDT	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  S  F  S  D  Y  N  M  I  W  V  R  Q  A  P  G  R  G  L  
                    Query_12192  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGACTCAGCTTCAGTGACTACAACATGATCTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  95.9% (234/244)  IGHV3-11*06  47   ............................T...T...C.............T......G....A..................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  I  S  S  Y  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12192  91   AGTGGGTTTCATACATTAGTAGTATTAGTAGTTACATAAACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.9% (234/244)  IGHV3-11*06  137  ........................G...........C.....................................................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  I  P  D  P  G  D  T  W  
                    Query_12192  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCCATACCTGACCCCGGGGACACCTGGG  270
V  95.9% (234/244)  IGHV3-11*06  227  ....................................................G...........--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-2*02   27   -----------------------------------------------------------------.....--------------------  31
J  97.5% (39/40)    IGHJ5*02     12   --------------------------------------------------------------------------------...C......  21

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_12192  271  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  300
J  97.5% (39/40)    IGHJ5*02     22   ..............................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_295889

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            297     7e-83
IGHD1-7*01                                                                                            14.1    8.3  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TAAAAGACTACACA	AACTGGTACT	TCC	TTGCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAAGAGATATAAAAGACTACACAAACTGGTACTTCCTTGCCTAT	TRDIKDYTNWYFLAY	239	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	10	1	0	90.9
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	20	4	0	83.3
FR3-IMGT	125	238	114	102	12	0	89.5
CDR3-IMGT (germline)	239	248	10	8	2	0	80
Total	N/A	N/A	234	212	22	0	90.6


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  S  F  D  A  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  
                    Query_12193  15   GTACAGCCTCTGGATTCAGCTTTGATGCTTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGCATTA  104
V  90.6% (212/234)  IGHV3-9*01   65   ..G...............C........A.........................................................T....  154
                                         A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  W  T  G  G  S  I  G  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  A  K  S  L  L  F  L  
                    Query_12193  105  GTTGGACTGGTGGTAGTATTGGCTATGCGGACTCTGTGCAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAGTCTCCTATTTCTGG  194
V  90.6% (212/234)  IGHV3-9*01   155  ......A.A.......C..A..................A....................................ACTC...G.A....C  244
                                      S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      E  M  R  S  L  R  P  E  D  T  A  L  Y  F  C  T  R  D  I  K  D  Y  T  N  W  Y  F  L  A  Y  
                    Query_12193  195  AAATGAGAAGTCTGAGACCTGAGGACACGGCCTTGTATTTCTGTACAAGAGATATAAAAGACTACACAAACTGGTACTTCCTTGCCTATT  284
V  90.6% (212/234)  IGHV3-9*01   245  ......AC.........G.....................A....G...A.....------------------------------------  298
                                      Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                                      
D  90.0% (9/10)     IGHD1-7*01   6    --------------------------------------------------------------------......A...------------  15
J  92.9% (39/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------...A...C.  15

                                                                       
                                      W  G  Q  G  T  R  V  T  V  S  S  
                    Query_12193  285  GGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  317
J  92.9% (39/42)    IGHJ4*02     16   ...............T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_120370

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTGAGCTGGGAAGA	TATAGCAGTGGCTGG	CGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATAC	ARPELGRYSSGWRY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_12194  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTA  90
V  97.6% (282/289)  IGHV5-51*03  6    ..............................................................................C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_12194  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  97.6% (282/289)  IGHV5-51*03  96   .......................................................................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12194  181  GTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  ........................C....C....A..................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  P  E  L  G  R  Y  S  S  G  W  R  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12194  271  CATGTATTACTGTGCGAGACCTGAGCTGGGAAGATATAGCAGTGGCTGGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  97.6% (282/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (15/15)   IGHD6-19*01  4    ----------------------------------...............----------------------------------------  18
J  100.0% (37/37)   IGHJ4*02     12   ----------------------------------------------------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_120372

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            346     2e-97
IGHD3-9*01                                                                                            16.1    2.4  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAAGAGCGGTACGCATTGAT	ACTGTTTATTA	CGAGGGGCCTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAAGAGCGGTACGCATTGATACTGTTTATTACGAGGGGCCTCCTGACTAC	ATRAVRIDTVYYEGPPDY	264	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	77	27	23	4	0	85.2
FR2-IMGT	78	128	51	47	4	0	92.2
CDR2-IMGT	129	149	21	17	4	0	81
FR3-IMGT	150	263	114	104	10	0	91.2
CDR3-IMGT (germline)	264	267	4	4	0	0	100
Total	N/A	N/A	267	244	23	0	91.4


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  N  S  N  W  W  T  W  I  
                    Query_12195  1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGCGGGTCCATCAGTAATAGTAACTGGTGGACTTGGATTC  90
V  91.4% (244/267)  IGHV4-4*02   26   ................T...................................T..C........C.G..............G....G.C.  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  D  S  G  S  T  N  Y  N  P  S  L  M  S  R  V  
                    Query_12195  91   GCCAGCCCCCAGGAAAGGGGCTGGAGTGGATTGGGGAAATTATTGATAGTGGGAGCACCAACTACAACCCGTCCCTCATGAGTCGAGTCA  180
V  91.4% (244/267)  IGHV4-4*02   116  .............G..........................CTA.C.................................A...........  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      I  I  S  L  D  K  S  K  N  Q  S  S  R  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  T  
                    Query_12195  181  TCATCTCACTAGACAAGTCCAAGAATCAGTCCTCCCGGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGACAA  270
V  91.4% (244/267)  IGHV4-4*02   206  C...A...G................C....T.....T...G....G................................A........---  292
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A     

                                      ----------------CDR3-IMGT--------------------->                                  
                                      R  A  V  R  I  D  T  V  Y  Y  E  G  P  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12195  271  GAGCGGTACGCATTGATACTGTTTATTACGAGGGGCCTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  351
D  90.9% (10/11)    IGHD3-9*01   17   -----------------....G......-----------------------------------------------------  27
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_120373

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            385     4e-109
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	248	2	0	99.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12196  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.2% (248/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_12196  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  99.2% (248/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_12196  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  99.2% (248/250)  IGHV3-7*01   227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12196  271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_253238

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           369     2e-104
IGHD2-2*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATAGGGCAA	TACCAGC	CCCGCTACGCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATAGGGCAATACCAGCCCCGCTACGCATTTGACTAC	ARIGQYQPRYAFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12197  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.6% (242/248)  IGHV3-48*03  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  A  Y  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12197  91   AGTGGGTTTCATACATCAGTAGTAGTGCTTATACCATATACTACGCAGATTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (242/248)  IGHV3-48*03  137  ................T..........G.AG..................C........................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  I  G  Q  Y  Q  P  R  
                    Query_12197  181  AGAACTCACTCTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAATAGGGCAATACCAGCCCCGCT  270
V  97.6% (242/248)  IGHV3-48*03  227  ..........G.........................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-2*01   16   -----------------------------------------------------------------------------.......------  22

                                      ------------->                                  
                                      Y  A  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_12197  271  ACGCATTTGACTACTGGGGCCAGGGAAGCCTGGTCACCGTCTCCTCAG  318
J  97.7% (42/43)    IGHJ4*02     6    -----......................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_120377

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD2-2*02                                                                                            12.2    32    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCA	CTGGTATAC	TTACGTCAGCGGGGGATATG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTGGTATACTTACGTCAGCGGGGGATATGTTGACTAC	ARGHWYTYVSGGYVDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12198  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S 
                    Query_12198  91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGCTACCATATCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ................A.................G................................T......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  W  Y  T  Y  V 
                    Query_12198  181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCACTGGTATACTTACGTC  270
V  97.6% (244/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (8/9)      IGHD2-2*02   22   --------------------------------------------------------------------------...C.....-------  30

                                      GT------------------>                                  
                                       S  G  G  Y  V  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_12198  271  AGCGGGGGATATGTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  325
J  97.6% (41/42)    IGHJ4*02     7    -------------.............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_120378

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            383     1e-108
IGHD3-10*01                                                                                           14.1    8.7   
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TCGGGGA	CTCCTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATCGGGGACTCCTGTTTGACTTC	ARDRGLLFDF	269	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	41	4	0	91.1
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	154	27	26	1	0	96.3
FR3-IMGT	155	268	114	107	7	0	93.9
CDR3-IMGT (germline)	269	276	8	8	0	0	100
Total	N/A	N/A	275	260	15	0	94.5


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  G  I  S  G  D  S  V  S  S  D  T  A  A  W  N  W  I  S 
                    Query_12199  2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGGCATCTCCGGGGACAGTGTCTCTAGCGACACTGCTGCTTGGAACTGGATCAGT  91
V  94.5% (260/275)  IGHV6-1*01   31   ........G...T.G......................C.........................A...G.....................G  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  K  S  K  W  Y  N  D  Y  A  V  S  V  K  G  R 
                    Query_12199  92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAAGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAGGGTCGA  181
V  94.5% (260/275)  IGHV6-1*01   121  ..............................................G....................................AA.....  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  I  N  S  D  T  S  K  N  Q  F  S  L  H  L  N  S  M  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_12199  182  ATAACCATCAACTCAGACACATCCAAGAACCAGTTCTCCCTGCACCTGAACTCTATGACTCCCGAGGACACGGCTGTATACTACTGTGCA  271
V  94.5% (260/275)  IGHV6-1*01   211  ............C...............................G.........G......................G..T.........  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------CDR3-IMGT--------->                                  
                                       R  D  R  G  L  L  F  D  F  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_12199  272  AGAGATCGGGGACTCCTGTTTGACTTCTGGGGCCAGGGAATCCTGGTCTCCGTCTCGTCAG  332
V  94.5% (260/275)  IGHV6-1*01   301  .....--------------------------------------------------------  305
                                       R                                                           
D  100.0% (7/7)     IGHD3-10*01  14   -----.......-------------------------------------------------  20
J  90.7% (39/43)    IGHJ4*02     6    ------------------.......A..............C.......A.......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_253235

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           346     2e-97
IGHD2-21*01                                                                                           19.9    0.18 
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-21*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTGTTCCAAT	TGGTGGTTATTGGTAT	CCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTGTTCCAATTGGTGGTTATTGGTATCCCTTCGATCCC	ARDRVPIGGYWYPFDP	296	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	181	36	16	8	12	44.4
FR3-IMGT	182	295	114	105	9	0	92.1
CDR3-IMGT (germline)	296	303	8	8	0	0	100
Total	N/A	N/A	303	264	27	12	87.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y
                    Query_12200  1    GCAGCTGGTGCAATCTGGAGGAGGCGTGGTCCAGCCGGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTACTTA  90
V  87.1% (264/303)  IGHV3-30*04  6    ..........G.G.....G.................T...A.....................................C.......GC..  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------------CDR2-IMGT------------
                                        S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  A  Y  D  G  N  T  Y  Y  A  D  S
                    Query_12200  91   TAGTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATTGCATATGATGGCAATACATACTACGCAGACTC  180
V  87.1% (264/303)  IGHV3-30*04  96   .GC......................................................AT..........A.G..------------.TAA  173
                                        A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D  G  S              N  K

                                      ><----------------------------------------------------FR3-IMGT----------------------------
                                        Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  D  T  L  Y  L  Q  M  N  R  L  R  P
                    Query_12200  181  CTACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAATTCCAGGGACACCCTCTATCTGCAAATGAACCGCCTGAGACC  270
V  87.1% (264/303)  IGHV3-30*04  174  A..........................A.........................A.A....G..G...............A........G.  263
                                        Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A

                                      ------------------------><-------------------CDR3-IMGT------------------>                 
                                        E  D  T  A  V  Y  Y  C  A  R  D  R  V  P  I  G  G  Y  W  Y  P  F  D  P  W  G  Q  G  T  L
                    Query_12200  271  TGAGGACACCGCTGTCTATTACTGTGCGAGAGATCGTGTTCCAATTGGTGGTTATTGGTATCCCTTCGATCCCTGGGGCCAGGGAACCCT  360
V  87.1% (264/303)  IGHV3-30*04  264  .........G.....G.................---------------------------------------------------------  296
                                        E  D  T  A  V  Y  Y  C  A  R                                                            
D  87.5% (14/16)    IGHD2-21*01  10   ---------------------------------------------.......G....C...-----------------------------  25
J  97.7% (42/43)    IGHJ5*02     9    ----------------------------------------------------------------.....C....................  34

                                                       
                                        V  T  V  S  S  
                    Query_12200  361  GGTCACCGTCTCCTCAG  377
J  97.7% (42/43)    IGHJ5*02     35   .................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_253233

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           276     3e-76
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCGC	TTTTTGAGTGG	ATACGAGGGGGGCTGTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCGCTTTTTGAGTGGATACGAGGGGGGCTGTCTTGATTCC	ARFRFLSGYEGGCLDS	242	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	28	25	23	2	0	92
CDR1-IMGT	29	52	24	18	6	0	75
FR2-IMGT	53	103	51	49	2	0	96.1
CDR2-IMGT	104	127	24	14	10	0	58.3
FR3-IMGT	128	241	114	100	14	0	87.7
CDR3-IMGT (germline)	242	247	6	6	0	0	100
Total	N/A	N/A	244	210	34	0	86.1


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        P  R  L  S  C  G  A  S  G  G  T  F  G  P  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W
                    Query_12201  4    CCCGAGACTCTCCTGTGGAGCCTCTGGAGGCACCTTCGGTCCCTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGTCTGGAGTG  93
V  86.1% (210/244)  IGHV3-21*01  51   ..T..............C..........TT.......A..AG......C................................G........  140
                                        L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W

                                      ---------><-------CDR2-IMGT------><----------------------------------------------------FR3
                                        V  S  S  V  S  T  S  G  D  H  T  F  Y  A  D  S  V  K  G  R  F  T  T  S  R  D  N  A  K  N
                    Query_12201  94   GGTCTCATCAGTGAGTACCAGTGGCGATCACACATTCTATGCGGACTCAGTGAAGGGCCGATTCACCACCTCGAGAGACAACGCCAAGAA  183
V  86.1% (210/244)  IGHV3-21*01  141  .........CA.T....GT...A.TAG.T...T..A...C..A.........................T...C.................  230
                                        V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N

                                      -IMGT----------------------------------------------------><-------------------CDR3-IMGT---
                                        V  L  Y  L  Q  M  N  R  L  T  V  E  D  T  A  V  Y  Y  C  A  R  F  R  F  L  S  G  Y  E  G
                    Query_12201  184  TGTCCTGTATCTGCAAATGAACCGCCTTACAGTCGAGGACACGGCTGTATATTACTGTGCGAGATTCCGCTTTTTGAGTGGATACGAGGG  273
V  86.1% (210/244)  IGHV3-21*01  231  CTCA..................A....G.G..C...............G...............--------------------------  294
                                        S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                           
D  90.9% (10/11)    IGHD3-3*01   11   ----------------------------------------------------------------------....G......---------  21

                                      --------------->                                  
                                        G  C  L  D  S  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_12201  274  GGGCTGTCTTGATTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  323
J  92.9% (39/42)    IGHJ4*02     7    --------....C.A...............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_253230

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     2e-90
IGHD3-10*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCGGAGGTTCC	ACTATGG	CCACCTGACGCCAC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCGGAGGTTCCACTATGGCCACCTGACGCCACTTGAGTAC	ASRRFHYGHLTPLEY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	224	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  N  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_12202  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAACTGGGTCCGCCAGACCCCAGGGAGGGGGCTGGAG  90
V  92.6% (224/242)  IGHV4-34*01  49   .......................................................G....A........C.........A..........  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  V  N  H  S  G  N  S  N  S  N  P  S  L  K  S  R  V  T  I  L  V  D  T  S  K  N 
                    Query_12202  91   TGGCTTGGGGAAGTCAATCATAGTGGCAACAGCAACTCCAACCCGTCCCTCAAGAGTCGAGTCACCATATTAGTCGACACGTCCAAGAAC  180
V  92.6% (224/242)  IGHV4-34*01  139  ...A........A.............A.G..C.....A................................C...A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  S  R  R  F  H  Y  G  H  L  T 
                    Query_12202  181  CAGTTCTCCCTGAAACTGACTTCTGTGACCGCCGCGGACACGGCTCTTTATTATTGTGCGAGTCGGAGGTTCCACTATGGCCACCTGACG  270
V  92.6% (224/242)  IGHV4-34*01  229  ..............G....GC........................G.G.....C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD3-10*01  6    -------------------------------------------------------------------------.......----------  12

                                      ----------->                                  
                                       P  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12202  271  CCACTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.6% (41/42)    IGHJ4*02     7    ----....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_253231

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           307     1e-85
IGHD6-6*01                                                                                            18.0    0.59 
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD6-6*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACATGGCTC	AGCAGTTCGTCC	TCCTTTTTGCCCCAGCCTCTT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACATGGCTCAGCAGTTCGTCCTCCTTTTTGCCCCAGCCTCTTGACCTC	ARTWLSSSSSFLPQPLDL	237	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	16	8	0	66.7
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	20	4	0	83.3
FR3-IMGT	123	236	114	111	3	0	97.4
CDR3-IMGT (germline)	237	242	6	6	0	0	100
Total	N/A	N/A	230	213	17	0	92.6


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  N  F  R  P  Y  P  M  N  W  V  R  Q  A  P  G  K  G  L  E  Y  V  S  V  I  
                    Query_12203  13   GTGCAGCCTCTGGATTTAATTTCAGACCCTATCCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGGAATATGTTTCAGTTATTA  102
V  92.6% (213/230)  IGHV3-64*01  65   ................C.CC.....TAG....G.T...C.............................................C.....  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  Y  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      T  T  N  G  E  S  T  Y  Y  A  K  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_12203  103  CTACTAATGGGGAGAGCACATATTATGCAAAATCTGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTC  192
V  92.6% (213/230)  IGHV3-64*01  155  G..G........GT.................C..........................................................  244
                                      S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><----------------------CDR3-IMGT--------------
                                      Q  M  G  S  L  R  A  E  D  M  A  V  Y  F  C  A  R  T  W  L  S  S  S  S  S  F  L  P  Q  P  
                    Query_12203  193  AAATGGGCAGCCTGAGAGCTGAGGACATGGCTGTATATTTCTGTGCGAGAACATGGCTCAGCAGTTCGTCCTCCTTTTTGCCCCAGCCTC  282
V  92.6% (213/230)  IGHV3-64*01  245  ..................................G....A..........----------------------------------------  294
                                      Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                                         
D  91.7% (11/12)    IGHD6-6*01   7    -----------------------------------------------------------.....C......-------------------  18

                                      ------->                                  
                                      L  D  L  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_12203  283  TTGACCTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  324
J  95.0% (38/40)    IGHJ5*02     12   --....C......................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_128143

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            382     4e-108
IGHD3-10*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGAC	TGGTTCGGGGA	CTTCCTC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACTGGTTCGGGGACTTCCTCCTTTGATTAC	ARVTGSGTSSFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	267	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  G  S  Y
                    Query_12204  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCGGCAGCTA  90
V  92.1% (267/290)  IGHV1-8*02   6    ..................G...............................................................AC......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  V  N  W  V  R  Q  A  P  G  Q  G  L  G  W  M  G  G  M  N  P  N  S  G  N  T  D  *  A  Q
                    Query_12204  91   TGATGTCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGGGTGGATGGGAGGGATGAATCCTAACAGTGGGAACACAGACTAAGCACA  180
V  92.1% (267/290)  IGHV1-8*02   96   ....A....................A...............A..........T.......C...........T.......G...T.....  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  Y  M  E  L  S  S  L  G  S  A  D  T  A
                    Query_12204  181  GAAGTTCCGGGGGAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCTACATGGAGCTGAGTAGTCTGGGATCTGCCGACACGGC  270
V  92.1% (267/290)  IGHV1-8*02   186  ........A...C...................A...C..C.T........................C..C...A......AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  V  T  G  S  G  T  S  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12204  271  CGTCTATTACTGTGCGAGAGTGACTGGTTCGGGGACTTCCTCCTTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  92.1% (267/290)  IGHV1-8*02   276  ...G................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (11/11)   IGHD3-10*01  10   ------------------------...........---------------------------------------------------  20
J  97.7% (43/44)    IGHJ4*02     5    ------------------------------------------......C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_128142

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           374     7e-106
IGHD3-3*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	242	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12205  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (242/245)  IGHV4-34*01  49   .................................................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_12205  91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.8% (242/245)  IGHV4-34*01  139  .........................................................................T................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_12205  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  98.8% (242/245)  IGHV4-34*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12205  271  GCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_128141

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-20*01                                                                                           367     6e-104
IGHD6-13*01                                                                                           27.6    8e-04 
IGHJ6*02                                                                                              112     6e-29 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-20*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GG	ATAGCAGCAGCTGCTAC	CAACTCCCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGATAGCAGCAGCTGCTACCAACTCCCTCTACTACTACTACGGTATGGACGTC	ARGIAAAATNSLYYYYGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  D  Y  A  M  M  W  V  R  Q  A  P  G  K  G  L  
                    Query_12206  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGAGGATTATGCCATGATGTGGGTCCGCCAAGCTCCCGGGAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-20*01  47   ...........................................T.......G.....GC.................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  N  G  G  S  A  G  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12206  91   AGTGGGTCTCTGGTATTAATTGGAATGGTGGTAGCGCAGGTTATGGAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (242/249)  IGHV3-20*01  137  ...................................A.........C............................................  226
                                      E  W  V  S  G  I  N  W  N  G  G  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R  G  I  A  A  A  A  T  
                    Query_12206  181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCCTTGTATCACTGTGCGAGAGGGATAGCAGCAGCTGCTACCA  270
V  97.2% (242/249)  IGHV3-20*01  227  .....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R                       
D  94.1% (16/17)    IGHD6-13*01  5    -----------------------------------------------------------------------.............G...--  21

                                      R3-IMGT------------------------>                                 
                                      N  S  L  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12206  271  ACTCCCTCTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
J  100.0% (58/58)   IGHJ6*02     5    -------..........................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_128140

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           380     1e-107
IGHD3-16*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACAAGCGGGCGGCACC	TTTGGGG	CGAGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTAC	ARGQAGGTFGASDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  S  F  N  D  Y 
                    Query_12207  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAATGAAGGTCTCCTGCAAGGCTTCCGGTTACAGCTTTAACGACTAT  91
V  92.0% (266/289)  IGHV1-18*01  7    .............................................G......................T.......C.....C.AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  M  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  A  Y  N  G  N  T  K  Y  S  E 
                    Query_12207  92   GGTATCACTTGGATGCGACAGGCCCCTGGACAGGGGCCTGAGTGGATGGGATGGATCAGCGCATATAATGGTAACACAAAGTATTCAGAG  181
V  92.0% (266/289)  IGHV1-18*01  97   .......GC...G...................A....T........................T..C..............C...G..C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  L  Q  G  R  L  I  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_12207  182  AGGCTCCAGGGCAGACTCATCATGACCACAGACACATCCACGAGCACAGCCTACATGGAATTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.0% (266/289)  IGHV1-18*01  187  .A.............G...C.......................................GC.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  G  Q  A  G  G  T  F  G  A  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12207  272  GTCTATTATTGTGCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  92.0% (266/289)  IGHV1-18*01  277  ..G.....C..........---------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD3-16*01  15   ------------------------------------.......---------------------------------------------  21
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_128147

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ2*01                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TTACTATAATCCTAGTGGTTTTTAC	GGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTACTATAATCCTAGTGGTTTTTACGGGTACTGGTACTTCGATCTC	ARDYYNPSGFYGYWYFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  N  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12208  1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAATAATTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ...........................G............G..G...C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  D  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12208  91   TGGATTGGGGACATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  .........T.T..............................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Y  Y  N  P  S  G  F  Y 
                    Query_12208  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATTACTATAATCCTAGTGGTTTTTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.0% (21/25)    IGHD3-22*01  4    -----------------------------------------------------------------.......G..AG........A....  28

                                      -------------------->                                  
                                       G  Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_12208  271  GGGTACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  325
J  100.0% (52/52)   IGHJ2*01     2    ---....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_128146

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           343     2e-96
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATGG	GGTTCGAGGA	CACTCGACCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTTCGAGGACACTCGACCGTTTTTGATATC	ARDGVRGHSTVFDI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	231	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  N  S  N  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12209  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAATAGTAACTCTTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (231/243)  IGHV4-59*08  49   .................................T......G....T...AC.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_12209  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTATAATCCCTCCCTTAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  95.1% (231/243)  IGHV4-59*08  139  ......................................C..C........C.....................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  V  R  G  H  S  T  V 
                    Query_12209  181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGATGGGGTTCGAGGACACTCGACCGTT  270
V  95.1% (231/243)  IGHV4-59*08  229  ....................C........C.......................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD3-10*01  11   --------------------------------------------------------------------......G...------------  20
J  93.2% (41/44)    IGHJ3*02     7    -----------------------------------------------------------------------------------------.  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  T  I  I  V  S  S  
                    Query_12209  271  TTTGATATCTGGGGCCAAGGGACAACGATCATCGTCTCTTCAG  313
J  93.2% (41/44)    IGHJ3*02     8    .........................T.G...C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_128145

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           372     2e-105
IGHD3-22*01                                                                                           43.0    2e-08 
IGHJ1*01                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-22*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GACA	TATTACTATGATACTAGTGGTTATT	CGCTTGTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACAGAGACATATTACTATGATACTAGTGGTTATTCGCTTGTTTACTTCAAACAC	ATETYYYDTSGYSLVYFKH	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12210  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  97.6% (244/250)  IGHV3-74*01  47   ...............................A..........................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  T  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12210  91   TGTGGGTCTCACGTATTAATAGTGATGGGAGTACAACAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (244/250)  IGHV3-74*01  137  .................................GC....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  E  T  Y  Y  Y  D  T  
                    Query_12210  181  AGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCAACAGAGACATATTACTATGATACTA  270
V  97.6% (244/250)  IGHV3-74*01  227  ..........................................................C.......G...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  96.0% (24/25)    IGHD3-22*01  2    --------------------------------------------------------------------------.............G..  17

                                      -IMGT----------------------->                                  
                                      S  G  Y  S  L  V  Y  F  K  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12210  271  GTGGTTATTCGCTTGTTTACTTCAAACACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  333
D  96.0% (24/25)    IGHD3-22*01  18   .........------------------------------------------------------  26
J  95.7% (44/46)    IGHJ1*01     7    -----------------......C.G.....................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_128144

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD1-26*01                                                                                           23.8    0.011
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCGA	TATACTGGGAGCTAC	CGAC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCGATATACTGGGAGCTACCGACATGCTTTTGATATC	ARFRYTGSYRHAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12211  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTATTTCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  95.5% (232/243)  IGHV4-59*01  49   ...........................................G...C.A.......................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       Y  I  G  Y  I  S  Y  S  G  S  T  D  Y  N  P  S  L  K  S  G  V  T  I  S  L  G  T  S  K  N 
                    Query_12211  91   TATATTGGGTATATCTCTTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTGGAGTCACCATATCACTAGGCACGTCCAAGAAC  180
V  95.5% (232/243)  IGHV4-59*01  139  .GG.............A................A.......................C..............G...A.............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  R  Y  T  G  S  Y  R  H 
                    Query_12211  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATTCCGATATACTGGGAGCTACCGACAT  270
V  95.5% (232/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD1-26*01  3    ---------------------------------------------------------------------....G..........------  17
J  97.8% (44/45)    IGHJ3*02     3    ----------------------------------------------------------------------------------------..  4

                                      ----------->                               
                                       A  F  D  I  W  S  Q  G  T  M  V  T  V  S  
                    Query_12211  271  GCTTTTGATATCTGGAGCCAAGGGACAATGGTCACCGTCTCTT  313
J  97.8% (44/45)    IGHJ3*02     5    ...............G...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_128149

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           361     4e-102
IGHD2-2*01                                                                                            23.8    0.011 
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GAGGGAGTGCG	GTAGTATCAGCTGCT	TTCGGGGT	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGAGGGAGTGCGGTAGTATCAGCTGCTTTCGGGGTCAACTGGTTCGACCCC	AKGGSAVVSAAFGVNWFDP	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  P  G  F  T  S  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12212  1    GGTCCCTGAGACTCTCCTGTGCAGCCCCTGGATTCACCTCTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-23*01  47   ..........................T............T.................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  A  A  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12212  91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGCTGCCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCG  180
V  96.4% (240/249)  IGHV3-23*01  137  ..............................G.AG.......................................................A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      E  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  G  S  A  V  V  S  
                    Query_12212  181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCCGTATATTACTGTGCGAAAGGAGGGAGTGCGGTAGTATCAG  270
V  96.4% (240/249)  IGHV3-23*01  227  ..............C.........................G............................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (14/15)    IGHD2-2*01   12   --------------------------------------------------------------------------------......C...  21

                                      -IMGT----------------------->                                  
                                      A  A  F  G  V  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12212  271  CTGCTTTCGGGGTCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  93.3% (14/15)    IGHD2-2*01   22   .....----------------------------------------------------------  26
J  100.0% (50/50)   IGHJ5*02     2    -------------..................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_128148

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           316     2e-88
IGHD3-3*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCCA	GGAGTGG	GCGGACGGACG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCCAGGAGTGGGCGGACGGACGCTACTTTGACTAC	ARLQEWADGRYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  E  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_12213  1    ACCCTGTCCCTCACCTGCGAAGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*08  49   ..................ACT...................G........................................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  S  Y  S  G  R  T  D  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_12213  91   TGGCTTGGGTATGTCTCTTATAGTGGGAGAACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCGAAGAAC  180
V  91.4% (223/244)  IGHV4-59*08  139  ...A........A...A...C........C...A..................................A..............C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  Y  L  K  L  S  S  V  I  A  E  D  T  A  L  Y  Y  C  A  R  L  Q  E  W  A  D  G  R  Y 
                    Query_12213  181  CAATTCTACCTGAAACTGAGCTCTGTGATCGCCGAAGACACGGCCCTCTATTATTGTGCGAGACTCCAGGAGTGGGCGGACGGACGCTAC  270
V  91.4% (223/244)  IGHV4-59*08  229  ..G....C......G.............C.....C..........G.G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------------------------------------------------------------....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_12213  271  TTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ4*02     6    .....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_117039

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATCGTGGTG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATCGTGGTGACTACTTTGACCAC	ARGLHYYDRGDYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12214  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (242/250)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_12214  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAATAAGTCCCTCAAGAGTCGAATTACCATATCGGTAGACACGTCT  180
V  96.8% (242/250)  IGHV4-31*03  139  ..................................G............CCC................G..........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R 
                    Query_12214  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCCATTACTATGATCGT  270
V  96.8% (242/250)  IGHV4-31*03  229  .....................................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (16/18)    IGHD3-22*01  3    ----------------------------------------------------------------------------...........A..  16

                                      ----------------->                                  
                                       G  D  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12214  271  GGTGACTACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  88.9% (16/18)    IGHD3-22*01  17   A...------------------------------------------------  20
J  97.9% (47/48)    IGHJ4*02     1    ----...........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_117038

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           347     7e-98
IGHD3-10*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTACCGGGGAGGG	ATTACTTTGGTTCGGGGAGT	CGCACCGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTACCGGGGAGGGATTACTTTGGTTCGGGGAGTCGCACCGGCTTTGACTAC	ARHVPGRDYFGSGSRTGFDY	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	233	11	0	95.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_12215  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAGT  93
V  95.5% (233/244)  IGHV4-59*08  50   .....TCC...A....C........................................................A................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  S  P  S  L  K  S  R  V  T  I  S  I  D  T  S  N  N  
                    Query_12215  94   GGATTGGCTATATCTATTACAGTGGGAGCACCAACTACAGCCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAACAACC  183
V  95.5% (233/244)  IGHV4-59*08  140  .......G...............................A...............................G.............G....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  V  P  G  R  D  Y  F  G  
                    Query_12215  184  AGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATGTACCGGGGAGGGATTACTTTGGTT  273
V  95.5% (233/244)  IGHV4-59*08  230  ............A...................................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  95.0% (19/20)    IGHD3-10*01  3    ------------------------------------------------------------------------------......A.....  14

                                      T------------------------>                                  
                                      S  G  S  R  T  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12215  274  CGGGGAGTCGCACCGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  95.0% (19/20)    IGHD3-10*01  15   ........----------------------------------------------------  22
J  100.0% (44/44)   IGHJ4*02     5    ----------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_165278

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-9*01                                                                                            14.1    8.3  
IGHJ2*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTACGC	TTTTGAC	GGCA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTACGCTTTTGACGGCAACTGGTCCTTCGATCTC	AREYAFDGNWSFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12216  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGCCATGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ...............................................T...................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  T  T  G  G  S  T  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_12216  91   AGTGGGTTTCAGCTATTACTACTACTGGTGGTAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  .......C..........G.GG..G.............T................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  M  E  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  Y  A  F  D  G  N  
                    Query_12216  181  AGAACACGTTGTCTATGGAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAGAGAGTACGCTTTTGACGGCAACT  270
V  94.0% (235/250)  IGHV3-23*01  227  ........C...A.C..C......................G.........................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-9*01   12   ----------------------------------------------------------------------------.......-------  18
J  92.2% (47/51)    IGHJ2*01     3    ---------------------------------------------------------------------------------------...  5

                                      ------------->                                  
                                      W  S  F  D  L  R  G  R  G  T  L  V  T  V  P  T  
                    Query_12216  271  GGTCCTTCGATCTCCGGGGCCGTGGCACCCTGGTCACTGTCCCCACAG  318
J  92.2% (47/51)    IGHJ2*01     6    ...A..........T..........................T..T...  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_165279

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           371     7e-105
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTAGA	TCAGGA	TGTACTAATACCAGCTGCT	CTCCGGAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTAGATCAGGATGTACTAATACCAGCTGCTCTCCGGATCTACTACTACGGTTTGGACGTC	AVDQDVLIPAALRIYYYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  V  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_12217  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTGTTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  97.2% (244/251)  IGHV4-61*08  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  S  G  I  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12217  91   CTGGAGTGGATTGGGTATATCTATAACAGTGGGATCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  97.2% (244/251)  IGHV4-61*08  139  ........................T.........G.......................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       T  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  V  D  Q  D  V  L  I  P 
                    Query_12217  181  ACGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGGTAGATCAGGATGTACTAATACCA  270
V  97.2% (244/251)  IGHV4-61*08  229  .A.......................G........................................AG...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.5% (17/19)    IGHD2-2*01   8    -----------------------------------------------------------------------------....G..G.....  20

                                      CDR3-IMGT-------------------------->                                 
                                       A  A  L  R  I  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12217  271  GCTGCTCTCCGGATCTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  339
D  89.5% (17/19)    IGHD2-2*01   21   ......---------------------------------------------------------------  26
J  98.2% (54/55)    IGHJ6*02     8    --------------.............A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_165273

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           248     8e-68
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	ARGLLIEDPNYVWGSFRRNHNCYTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	92	22	0	80.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	201	43	0	82.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  R  L  E 
                    Query_12218  1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGAGACTGGAG  90
V  82.4% (201/244)  IGHV4-59*01  49   ..................A....C.......G.......A...G..........AG....A.C........C.......A.G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_12218  91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  82.4% (201/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  N  Y 
                    Query_12218  181  CAGTTGTCTCTCAACCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCAACTAT  270
V  82.4% (201/244)  IGHV4-59*01  229  .....C..C..G..G....G.TCT.....................GT.....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_12218  271  GTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  94.7% (36/38)    IGHJ3*01     13   --------------------------------------...................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_117033

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            357     1e-100
IGHD3-10*01                                                                                           31.5    5e-05 
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTTCAAGGACAC	ATTACAATGGTTCGGGGAG	CCCCCCC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGAGTTCAAGGACACATTACAATGGTTCGGGGAGCCCCCCCACTTCGGTTTGGACGTC	VREFKDTLQWFGEPPHFGLDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12219  1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGACAAGCTCCAGGGAAGGGCCTGG  90
V  95.6% (239/250)  IGHV3-9*01   47   ........................C..........................................G......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  K  N  S  T  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12219  91   AGTGGGTCTCAGGTATTAGCTGGAAAAATTCTACCATAGGATATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (239/250)  IGHV3-9*01   137  ...................T.....T.G.GG..G......C.................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  V  R  E  F  K  D  T  L  Q  
                    Query_12219  181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGTAAGAGAGTTCAAGGACACATTACAAT  270
V  95.6% (239/250)  IGHV3-9*01   227  ...............................................................C..A...--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  94.7% (18/19)    IGHD3-10*01  3    ----------------------------------------------------------------------------------.....T..  10

                                      DR3-IMGT-------------------------->                                 
                                      W  F  G  E  P  P  H  F  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12219  271  GGTTCGGGGAGCCCCCCCACTTCGGTTTGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTCCTCA  338
D  94.7% (18/19)    IGHD3-10*01  11   ...........---------------------------------------------------------  21
J  94.0% (47/50)    IGHJ6*02     13   ------------------...A....A................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_165271

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            347     7e-98
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTCAGATGGCGATTTTG	GCACTGGCTGGTAC	GGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACTCAGATGGCGATTTTGGCACTGGCTGGTACGGGGGTTTTGACGAC	AKDSDGDFGTGWYGGFDD	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  E  H  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12220  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCGAAGAGCATGCCATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGCCTGG  90
V  94.4% (236/250)  IGHV3-9*01   47   ........................................T..T..TT...................G......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  T  I  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12220  91   AGTGGGTCTCAGGTATTAGTTGGAATAGCGGAACCATAAAGTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-9*01   137  ............................T..T.G....GGC.................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  K  D  S  D  G  D  F  G  
                    Query_12220  181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGAGACCTGAGGACACGGCCTTATATTACTGTGCAAAAGACTCAGATGGCGATTTTGGCA  270
V  94.4% (236/250)  IGHV3-9*01   227  ..........G........................G................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD6-19*01  8    ---------------------------------------------------------------------------------------...  10

                                      IMGT--------------------->                                  
                                      T  G  W  Y  G  G  F  D  D  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_12220  271  CTGGCTGGTACGGGGGTTTTGACGACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  330
D  92.9% (13/14)    IGHD6-19*01  11   G..........-------------------------------------------------  21
J  95.3% (41/43)    IGHJ4*02     6    -----------------......T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_117035

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     8e-121
IGHD6-13*01                                                                                           14.1    9.7   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	ARHRYLGPRQQATENDY	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	111	3	0	97.4
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	283	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  Q  G  S  G  Y  T  F  T  
                    Query_12221  2    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTACCA  91
V  95.9% (283/295)  IGHV5-51*01  2    ....G.........................................G..................A...............G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  P  R  Y  
                    Query_12221  92   CCTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAGTCATCTATCCTGGTGACTCTGATCCCAGATACA  181
V  95.9% (283/295)  IGHV5-51*01  92   G...........G..........................................GA.......................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_12221  182  GCCCGTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTTGCAGTGGAGTAGCCTGAAGGCCTCGGACA  271
V  95.9% (283/295)  IGHV5-51*01  182  ..........................A................................C..........C...................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------CDR3-IMGT-------------------->                      
                                      T  A  M  Y  Y  C  A  R  H  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  Y  W  G  Q  G  T  L  V  
                    Query_12221  272  CCGCCATGTATTACTGTGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCA  361
V  95.9% (283/295)  IGHV5-51*01  272  .........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD6-13*01  8    -------------------------------------------.......----------------------------------------  14
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------.............................  36

                                                  
                                      T  V  S  S  
                    Query_12221  362  CCGTCTCCTCAG  373
J  100.0% (41/41)   IGHJ4*02     37   ............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_117034

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           322     2e-90
IGHD5-18*01                                                                                           27.6    8e-04
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCTACCGGAA	GTGGATACAACTATGGT	AAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCTACCGGAAGTGGATACAACTATGGTAATAACTGGTTCGACCCG	ARDPTGSGYNYGNNWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  I  V  S  G  A  S  V  S  H  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_12222  4    CCCTGAGACTCTCCTGTATTGTCTCTGGTGCCTCCGTCAGTCATTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAAT  93
V  92.2% (225/244)  IGHV4-59*02  50   .....TCC...A....C.C...........G..........AG.........................C...................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  G  G  I  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N  
                    Query_12222  94   GGATTGGATATATCTATTACGGGGGGATCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAACC  183
V  92.2% (225/244)  IGHV4-59*02  140  .......G............A.T....G...........................................G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  R  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  Y  
                    Query_12222  184  AGTTCTCCCTGAGGCTGAGCTCTCTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGACCCTACCGGAAGTGGATACAACTATG  273
V  92.2% (225/244)  IGHV4-59*02  230  ............A..........G......................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  94.1% (16/17)    IGHD5-18*01  1    ---------------------------------------------------------------------------.........G.....  15

                                      ------------------->                                  
                                      G  N  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12222  274  GTAATAACTGGTTCGACCCGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  94.1% (16/17)    IGHD5-18*01  16   ..----------------------------------------------------  17
J  98.0% (48/49)    IGHJ5*02     3    -----..............C..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_117037

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         366     2e-103
IGHD2-15*01                                                                                           18.0    0.64  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCACCTT	TATTGTAGT	TATGCCAGTATCGGCTGCTTGACCGGATGTTGCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGACCACCTTTATTGTAGTTATGCCAGTATCGGCTGCTTGACCGGATGTTGCCACTACTACGGTATGGACGTC	VRDHLYCSYASIGCLTGCCHYYGMDV	241	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	248	8	7	1	0	87.5
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  V  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_12223    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCGTCAGCAGTGGTTACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  97.2% (241/248)  IGHV4-38-2*02  49   ..................A.................A.....................................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 
                    Query_12223    91   GAGTGGATTGGGAGTATCTATCATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAG  180
V  97.2% (241/248)  IGHV4-38-2*02  139  .......................................................................A..................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------------------------
                                         N  Q  F  S  L  N  L  R  S  M  T  A  A  D  T  A  V  Y  Y  C  V  R  D  H  L  Y  C  S  Y  A 
                    Query_12223    181  AACCAGTTCTCCCTGAACCTGAGGTCTATGACCGCCGCAGACACGGCCGTGTATTACTGTGTGAGAGACCACCTTTATTGTAGTTATGCC  270
V  97.2% (241/248)  IGHV4-38-2*02  229  .................G.....C...G.................................C......----------------------  296
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD2-15*01    5    ---------------------------------------------------------------------------.........------  13

                                        -----CDR3-IMGT--------------------------------->                                 
                                         S  I  G  C  L  T  G  C  C  H  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12223    271  AGTATCGGCTGCTTGACCGGATGTTGCCACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  351
J  100.0% (53/53)   IGHJ6*02       10   ----------------------------.....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_165275

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           336     2e-94
IGHD3-22*01                                                                                           16.1    2.6  
IGHJ3*01                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGATCCCTT	CTATGATA	CTACAGGAAGTTATTCCTTTGACCTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACATATGGATCCCTTCTATGATACTACAGGAAGTTATTCCTTTGACCTT	VRHMDPFYDTTGSYSFDL	289	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	68	6	0	91.9
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	44	7	0	86.3
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	93	21	0	81.6
CDR3-IMGT (germline)	289	296	8	7	1	0	87.5
Total	N/A	N/A	295	255	40	0	86.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  V  S  G  Y  R  F  T  
                    Query_12224  2    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGAGTCTCTGGATACAGGTTTACCA  91
V  86.4% (255/295)  IGHV5-51*01  2    ..G.....................................C.........................AG.GT...........C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  K  W  I  A  W  V  R  H  M  P  G  Q  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  
                    Query_12224  92   GCAAATGGATCGCCTGGGTGCGCCACATGCCCGGACAGGGCCTGGAGTGGATGGGCGTCATCTATCCCGGAGACTCTGATACCAGATACA  181
V  86.4% (255/295)  IGHV5-51*01  92   ..T.C.......G............G........GA.A.................GA..........T..T...................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  Q  G  R  I  S  I  S  A  D  E  S  T  N  T  A  S  L  H  W  G  F  L  R  A  S  D  
                    Query_12224  182  ACCCGTCCTTCCAAGGCCGGATCAGCATTTCAGCCGACGAGTCCACCAACACTGCCTCTCTGCACTGGGGCTTCCTGCGGGCCTCGGACA  271
V  86.4% (255/295)  IGHV5-51*01  182  G.................A.G...C...C.........A......T..G...C....AC.....G...A..AG....AA...........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------------CDR3-IMGT--------------------->                   
                                      T  A  I  Y  Y  C  V  R  H  M  D  P  F  Y  D  T  T  G  S  Y  S  F  D  L  W  G  Q  G  T  M  
                    Query_12224  272  CTGCCATATACTATTGTGTGAGACATATGGATCCCTTCTATGATACTACAGGAAGTTATTCCTTTGACCTTTGGGGCCAAGGGACAATGG  361
V  86.4% (255/295)  IGHV5-51*01  272  .C.....G..T..C....C......-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD3-22*01  7    -------------------------------------........---------------------------------------------  14
J  97.1% (33/34)    IGHJ3*01     17   -----------------------------------------------------------------------...................  35

                                                     
                                      V  T  V  S  S  
                    Query_12224  362  TCACCGTCTCCTCAG  376
J  97.1% (33/34)    IGHJ3*01     36   ..........T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_65933

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           382     4e-108
IGHD4-4*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACGC	TGACGACAGT	GTTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACGCTGACGACAGTGTTAACTTTGATTAC	ARYADDSVNFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	266	22	0	92.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  N  F  M  S  Y 
                    Query_12225  2    CAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACTTCTGGTTACAACTTTATGAGCTAT  91
V  92.4% (266/288)  IGHV1-18*01  7    ...................C...........................................G............C.....CC......  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  G  G  L  E  W  M  G  W  S  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_12225  92   GGCATCAGTTGGGTGCGACAGGCCCCTGGAGGAGGACTTGAGTGGATGGGCTGGAGCAGCGCTTACAATGGTAACACAAACTATGCGCAG  181
V  92.4% (266/288)  IGHV1-18*01  97   ..T.....C.....................CA...G..............A....T..............................A...  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       D  F  Q  G  R  V  T  M  T  T  D  R  S  T  S  T  A  Y  L  V  L  R  S  L  S  S  D  D  T  A 
                    Query_12225  182  GACTTCCAGGGCAGAGTCACCATGACCACAGACAGATCCACGAGCACAGCCTACTTGGTGTTGAGGAGCCTGAGCTCTGACGACACGGCC  271
V  92.4% (266/288)  IGHV1-18*01  187  A.GC..............................C...................A...A.C.............A...............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  Y  A  D  D  S  V  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12225  272  GTGTATTATTGTGCGAGATACGCTGACGACAGTGTTAACTTTGATTACTGGGGACAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.4% (266/288)  IGHV1-18*01  277  ........C.........----------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                 
D  90.0% (9/10)     IGHD4-4*01   1    -----------------------....T.....-------------------------------------------------  10
J  95.6% (43/45)    IGHJ4*02     4    -------------------------------------.......C........C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_158719

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           285     4e-79
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACTTTGACTTC	ARVSTSAYYFDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	213	31	0	87.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_12226  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGACAACCCCCAGGAAAGGGACTGGAG  90
V  87.3% (213/244)  IGHV4-59*01  49   .................................T........A.....T.C.........A....G..G........G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  D  M  Y  Y  G  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  S  F  D  T  S  K  R 
                    Query_12226  91   TGGATTGCCGATATGTATTACGGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGTCCTTTGACACGTCCAAGAGG  180
V  87.3% (213/244)  IGHV4-59*01  139  .......GGT....C......A....G.G..C...C................A..G............A..AG.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  Y  Y  F  D 
                    Query_12226  181  CAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATACTACTTTGAC  270
V  87.3% (213/244)  IGHV4-59*01  229  .............A....AGC..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-2*01   17   ---------------------------------------------------------------------......---------------  22
J  91.3% (42/46)    IGHJ4*02     1    -------------------------------------------------------------------------------...........  11

                                      -->                                
                                       F  W  G  R  G  T  L  V  V  V  S  S
                    Query_12226  271  TTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  305
J  91.3% (42/46)    IGHJ4*02     12   .A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_65931

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTAG	CGCCATAG	TAGCAGCAGCTGGTAC	ACTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGCGCCATAGTAGCAGCAGCTGGTACACTATTTGACTAC	TSAIVAAAGTLFDY	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	241	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  T  F  S  G  S  V  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_12227  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGGTCACCTTCAGTGGCTCTGTTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  95.3% (241/253)  IGHV3-73*01  47   .........A......................T..................C......................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  A  G  R  I  R  S  K  A  N  N  Y  A  T  A  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_12227  91   AGTGGGCTGGCCGTATTAGAAGCAAAGCTAACAATTACGCGACGGCGTATGCTGCGCCGGTGAAGGGCAGGTTCACCATCTCCAGAGATG  180
V  95.3% (241/253)  IGHV3-73*01  137  ......T..........................G.........A..A.........T.......A.........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  E  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  M  Y  Y  C  T  S  A  I  V  A  A  
                    Query_12227  181  ATTCAGAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAAGACACGGCCATGTATTACTGTACTAGCGCCATAGTAGCAGCAG  270
V  95.3% (241/253)  IGHV3-73*01  227  .....A........................................G.........G................-----------------  299
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (16/16)   IGHD6-13*01  6    ---------------------------------------------------------------------------------.........  14

                                      IMGT--------------->                                  
                                      A  G  T  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12227  271  CTGGTACACTATTTGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (16/16)   IGHD6-13*01  15   .......-----------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------....................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_110569

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            411     4e-117
IGHD3-16*01                                                                                           12.2    34    
IGHJ3*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GCTTCC	TGGGGG	CCATGAGA	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATC	ARGFLGAMRDGLDI	273	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	109	5	0	95.6
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	271	8	0	97.1


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  D  T  W  N  W  
                    Query_12228  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCAACAGTGATACTTGGAACTGGA  90
V  97.1% (271/279)  IGHV6-1*01   26   ...........................................................................C.G............  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_12228  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGGAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  97.1% (271/279)  IGHV6-1*01   116  .....................................A....................................................  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  S  S  K  N  Q  F  S  L  Q  L  N  S  V  T  F  E  D  T  A  V  Y  F  
                    Query_12228  181  GTCGAATAACCATTAACCCAGACTCATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTTTCGAGGACACGGCTGTGTATTTCT  270
V  97.1% (271/279)  IGHV6-1*01   206  .............C.........A.........................................CC....................A..  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------------CDR3-IMGT--------------->                                  
                                      C  A  R  G  F  L  G  A  M  R  D  G  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12228  271  GTGCAAGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  348
V  97.1% (271/279)  IGHV6-1*01   296  .........---------------------------------------------------------------------  304
                                      C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  17   ---------------......---------------------------------------------------------  22
J  95.9% (47/49)    IGHJ3*02     2    -----------------------------....C...T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_65937

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            357     1e-100
IGHD3-10*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	AATCGGGTGGGC	GGTTCGGGGA	TTTGTGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAATCGGGTGGGCGGTTCGGGGATTTGTGGTAC	VKSGGRFGDLWY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	237	9	0	96.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  L  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12229  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTCTTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.3% (237/246)  IGHV3-7*03   47   .........................................AG...............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  T  E  K  K  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12229  91   AGTGGGTGGCCAATATAAAGCAAGATGGTACTGAGAAAAAGTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.3% (237/246)  IGHV3-7*03   137  .............C..............A.G.......T.C.................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K  S  G  G  R  F  G  D  
                    Query_12229  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGTGAAATCGGGTGGGCGGTTCGGGGATT  270
V  96.3% (237/246)  IGHV3-7*03   227  ....................................................G..........C..------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD3-10*01  11   ------------------------------------------------------------------------------..........--  20

                                      ------->                                  
                                      L  W  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12229  271  TGTGGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (37/37)   IGHJ4*02     12   -----.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_65936

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            355     3e-100
IGHD6-19*01                                                                                           14.1    8.5   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTCTAATAA	TGGCTGG	GGCCCCGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCTCTAATAATGGCTGGGGCCCCGCCTACTACGGCTTGGACGTC	ASSNNGWGPAYYGLDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  P  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12230  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAGTCCCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (237/247)  IGHV3-7*03   47   ....................................C.......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  E  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12230  91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGAGGAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (237/247)  IGHV3-7*03   137  ....................C..............A......................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  S  N  N  G  W  G  P  
                    Query_12230  181  AGAATTCACTGTATTTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTATTGTGCGAGCTCTAATAATGGCTGGGGCCCCG  270
V  96.0% (237/247)  IGHV3-7*03   227  ....C.........C....A................................G.....C........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD6-19*01  12   ----------------------------------------------------------------------------.......-------  18

                                      T------------------>                              
                                      A  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_12230  271  CCTACTACGGCTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  320
J  95.9% (47/49)    IGHJ6*02     11   -.........TA......................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_65935

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           388     5e-110
IGHD2-2*01                                                                                            10.3    134   
IGHJ3*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTGAAGTCTTT	TACCA	CCGAG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATATC	ASLKSFTTEDAFDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	268	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  E  D  S  F  N  N  F
                    Query_12231  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGATCTGAAGACAGCTTTAATAATTT  90
V  93.1% (268/288)  IGHV5-51*01  6    ..............................A...................................T....G.T.........CC.GC.A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  R  P  G  K  G  L  E  W  M  G  F  I  Y  P  G  D  S  G  T  K  Y  S  P
                    Query_12231  91   CTGGATCGCCTGGGTGCGCCAGAGGCCCGGGAAAGGCCTGGAGTGGATGGGGTTCATCTATCCTGGTGACTCTGGTACCAAGTACAGCCC  180
V  93.1% (268/288)  IGHV5-51*01  96   ........G..............T............................A.....................A.....GA........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  I  T  I  S  A  D  K  S  I  N  S  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_12231  181  GTCCTTCCAAGGCCAGATCACCATCTCAGCCGACAAGTCCATCAACAGTGCCTACCTGCAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.1% (268/288)  IGHV5-51*01  186  ................G...........................G..CC...............A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  S  L  K  S  F  T  T  E  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12231  271  CATGTATTACTGTGCGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  359
V  93.1% (268/288)  IGHV5-51*01  276  ..................-----------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                          
D  100.0% (5/5)     IGHD2-2*01   16   ------------------------------.....------------------------------------------------------  20
J  100.0% (49/49)   IGHJ3*02     2    ----------------------------------------.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_65934

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            325     3e-91
IGHD3-3*01                                                                                            35.3    4e-06
IGHJ5*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCGTCGTCGCCGAA	ACGATTTTTGGAGTGGTT	TTGAGAT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCGTCGTCGCCGAAACGATTTTTGGAGTGGTTTTGAGATCTGGTTCGATTCA	ARLRRRRNDFWSGFEIWFDS	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  I  A  S  E  F  T  F  S  S  H  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12232  1    GGTCCCTGAGACTCTCCTGTATAGCCTCTGAATTCACCTTTAGTAGTCATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (228/248)  IGHV3-7*01   47   ....................GC........G...............CT..........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  H  D  G  S  E  T  K  Y  V  A  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12232  91   AGTGGGTGGCCAACATAAACCACGATGGAAGTGAGACAAAGTATGTGGCCTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.9% (228/248)  IGHV3-7*01   137  ...................G..A.............A.T.C.......A.........................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      R  D  S  V  F  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  A  R  L  R  R  R  R  N  D  
                    Query_12232  181  GGGATTCAGTGTTTCTACAAATGAACAGCCTGAGAGTCGACGACACGGCTGTGTATTACTGTGCGAGACTTCGTCGTCGCCGAAACGATT  270
V  91.9% (228/248)  IGHV3-7*01   227  A.A.C...C...A...G...................C...G...........................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-3*01   6    ------------------------------------------------------------------------------------......  11

                                      R3-IMGT------------------------>                                  
                                      F  W  S  G  F  E  I  W  F  D  S  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_12232  271  TTTGGAGTGGTTTTGAGATCTGGTTCGATTCATGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  336
D  100.0% (18/18)   IGHD3-3*01   12   ............------------------------------------------------------  23
J  91.5% (43/47)    IGHJ5*01     5    -------------------.........C..C........A.........G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_110562

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     2e-87
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GACTGTTAAACCCAAA	CAGTGGCTGG	GGGGACGGTTCTACTCTCG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGACTGTTAAACCCAAACAGTGGCTGGGGGGACGGTTCTACTCTCGCTACGGTATGGACGTC	AKETVKPKQWLGGRFYSRYGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  E  A  T  F  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_12233  1    GGTCCCTGAGACTCTCCTGTGAAGGCTCTGAAGCCACCTTTAGTAGCTATGCCATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-23*01  47   .....................C..C.....G.TT.........C.............GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  R  N  G  G  T  A  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12233  91   AGTGGGTCTCGGCTATTAGTCGCAATGGTGGCACTGCATACTACGCAGACTCCGTGAAGGGCCGATTCACCATTTCCAGAGACAATTCCA  180
V  90.0% (225/250)  IGHV3-23*01  137  ..........A.........G.T.G......T.GCA............................G........C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      T  N  T  V  F  L  H  M  S  S  L  R  P  E  D  T  A  I  Y  Y  C  A  K  E  T  V  K  P  K  Q  
                    Query_12233  181  CGAACACGGTGTTTCTGCACATGAGCAGCCTGAGACCCGAGGACACGGCCATATATTACTGTGCGAAAGAGACTGTTAAACCCAAACAGT  270
V  90.0% (225/250)  IGHV3-23*01  227  A.......C...A......A....A..........G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD6-19*01  9    --------------------------------------------------------------------------------------....  12

                                      --CDR3-IMGT----------------------------->                             
                                      W  L  G  G  R  F  Y  S  R  Y  G  M  D  V  W  G  Q  G  T  T  V  A  V  S
                    Query_12233  271  GGCTGGGGGGACGGTTCTACTCTCGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTC  340
D  100.0% (10/10)   IGHD6-19*01  13   ......----------------------------------------------------------------  18
J  97.8% (44/45)    IGHJ6*02     14   -------------------------.....................................A.......  58


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_110560

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            350     8e-99
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AACCT	ATAGTAGTGG	CAC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACCTATAGTAGTGGCACCTTTGTCTAC	ATYSSGTFVY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  D  F  T  F  T  I  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_12234  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGACTTCACGTTTACTATCTATTGGATGACCTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.9% (234/244)  IGHV3-7*01   47   ..............................GA.....C....G..G...........G.....................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  T  N  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12234  91   AGTGGGTGGCCAACACAAACCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.9% (234/244)  IGHV3-7*01   137  ...............T...G......................................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  Y  S  S  G  T  F  V  
                    Query_12234  181  AGAACTCACTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAACCTATAGTAGTGGCACCTTTGTCT  270
V  95.9% (234/244)  IGHV3-7*01   227  ................G...............................................--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD3-22*01  12   ---------------------------------------------------------------------..........-----------  21
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------.....A..  12

                                      ->                                  
                                      Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_12234  271  ACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  306
J  95.5% (42/44)    IGHJ4*02     13   ..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_110561

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         349     2e-98
IGHD5-12*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGAGGAT	TGGCTACGA	GACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGACCCCCTTTGACCTC	ARAGRIGYETPFDL	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_12235    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTACTCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  95.1% (235/247)  IGHV4-38-2*02  49   ................................................T.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K 
                    Query_12235    91   GAGTGGATTGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAG  180
V  95.1% (235/247)  IGHV4-38-2*02  139  ......................A.........C.........A..............A........................C.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  Q  F  S  L  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  T 
                    Query_12235    181  AACCAGTTCTCGTTGAATCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGAGCGGGGAGGATTGGCTACGAGACC  270
V  95.1% (235/247)  IGHV4-38-2*02  229  ...........CC....G....G...........C...............G................-----------------------  295
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD5-12*01    11   -----------------------------------------------------------------------------.........----  19

                                        ----------->                                  
                                         P  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12235    271  CCCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.5% (42/44)    IGHJ4*02       5    --.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_110566

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  L  R  Q  A  P  G  K  G  P  
                    Query_12236  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGCTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...G........................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_12236  91   AGTGGGTCTCAGCGATTACTGGGAGTGGTAGTAGCACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  .............T....G...T......G..............G......................................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_12236  181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  93.6% (234/250)  IGHV3-23*01  227  ...............................G....................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12236  271  ATTCACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_110567

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           272     2e-75
IGHD3-10*02                                                                                           21.8    0.040
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GTATCACTATGTTC	ACGGCGTAC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGTATCACTATGTTCACGGCGTACTTCGACCCC	ARGITMFTAYFDP	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	13	8	0	61.9
FR3-IMGT	126	239	114	96	18	0	84.2
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	210	36	0	85.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  V  S  G  F  T  V  S  R  T  Y  M  S  W  V  R  Q  T  P  E  K  G  L  
                    Query_12237  1    GGTCCCTGAGACTCTCCTGTGTAGTCTCTGGGTTCACCGTCAGTCGCACCTACATGAGCTGGGTCCGCCAGACTCCAGAAAAGGGGCTGG  90
V  85.4% (210/246)  IGHV3-53*01  47   .....................C..C...................A...A......................G......GG..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  H  Y  V  G  G  Q  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  M  D  D  S  K  
                    Query_12237  91   AGTGGGTCTCACTCCATTACGTCGGTGGTCAGACATATTACGCAGAGTCAGTGAAGGGCCGATTCACCATCTCCATGGACGACTCCAAGA  180
V  85.4% (210/246)  IGHV3-53*01  137  ...........G.TAT...TAG.......AGC.....C........C..C.........................GA...A.T.......  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------CDR3-IMGT-------
                                      N  T  L  Y  L  Q  L  N  S  V  T  V  D  D  T  A  V  Y  Y  C  A  R  G  I  T  M  F  T  A  Y  
                    Query_12237  181  ACACTCTGTATCTTCAACTCAATAGTGTGACAGTCGACGACACGGCCGTCTATTATTGTGCGCGAGGTATCACTATGTTCACGGCGTACT  270
V  85.4% (210/246)  IGHV3-53*01  227  ....G............A.G..C..CC...G..C...G...........G.....C......A...------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  92.9% (13/14)    IGHD3-10*02  1    ------------------------------------------------------------------....T.........----------  14
J  97.7% (42/43)    IGHJ5*02     9    -----------------------------------------------------------------------------------------.  9

                                      ------->                                  
                                      F  D  P  W  G  P  G  T  L  V  T  V  S  S  
                    Query_12237  271  TCGACCCCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.7% (42/43)    IGHJ5*02     10   ...............A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_110564

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           347     7e-98
IGHD4-17*01                                                                                           12.2    33   
IGHJ6*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCTCGCGAAGGG	GACTAC	CCTAGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGCTCGCGAAGGGGACTACCCTAGGTACTACTACCACGGTATGGACGTC	ARDAREGDYPRYYYHGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12238  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTCGCTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-21*01  47   ............................................A......G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  T  S  T  F  I  Y  Y  S  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12238  91   AGTGGGTCTCATCCATTAGTAGCACTAGCACTTTCATATACTACTCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  94.4% (236/250)  IGHV3-21*01  137  ......................T.G...T.G..A..........G........G...................................A  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      E  N  S  L  H  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  R  D  A  R  E  G  D  Y  
                    Query_12238  181  AGAACTCTCTGCATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTTCTGTGCGAGAGATGCTCGCGAAGGGGACTACC  270
V  94.4% (236/250)  IGHV3-21*01  227  .......A...T........................C....................A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD4-17*01  2    -----------------------------------------------------------------------------------......-  7

                                      -IMGT----------------------->                                 
                                      P  R  Y  Y  Y  H  G  M  D  V  R  G  Q  G  T  T  V  T  V  S  S 
                    Query_12238  271  CTAGGTACTACTACCACGGTATGGACGTCCGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  96.5% (55/57)    IGHJ6*02     6    -----.........T..............T................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_105338

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         339     2e-95
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	N/A	N/A	TCACCTGCCAACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGATCACCTGCCAACCCCTACTACCACGCTCTGGACGTC	ARSPANPYYHALDV	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  G  V  Y  I  S  N  G  G  Y  S  W  T  W  I  R  Q  P  P  G  R  G 
                    Query_12239    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTACATCAGCAATGGTGGTTACTCCTGGACCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  93.6% (233/249)  IGHV4-30-2*01  49   ..................G............G..C........G.................G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Q  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  R  S 
                    Query_12239    91   CTGGAGTGGATTGGGTACATCTATCAAAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGCGTCACCATATCGGTAGACAGGTCC  180
V  93.6% (233/249)  IGHV4-30-2*01  139  ..........................T...............................A......A...........A............  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  V  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  A  N  P  Y  Y 
                    Query_12239    181  AAGAACCAGTTCTCCGTTAACTTGAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGATCACCTGCCAACCCCTACTAC  270
V  93.6% (233/249)  IGHV4-30-2*01  229  ...............C.G..GC....C..........................G...............---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  92.7% (51/55)    IGHJ6*02       8    -----------------------------------------------------------------------------------.......  14

                                        -------------->                                 
                                         H  A  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12239    271  CACGCTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  318
J  92.7% (51/55)    IGHJ6*02       15   T...G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_220573

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           310     1e-86
IGHD5-18*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CTCA	GGATACATCTCTGGTTAC	CC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAGGATACATCTCTGGTTACCCCTAC	SGYISGYPY	240	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	238	113	105	8	0	92.9
Total	N/A	N/A	238	218	20	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  P  V  S  R  H  Y  M  S  W  V  R  Q  A  P  G  R  G  L  
                    Query_12240  1    GGTCCCTGAGACTCTCCTGCGCAGCCTCTGGATTACCCGTCAGTAGACACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAGGGGACTGG  90
V  91.6% (218/238)  IGHV3-53*01  47   ...................T...........G..CA..........CA.................................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  Y  T  S  G  S  T  Y  Y  T  D  S  V  M  G  R  F  T  I  S  R  D  P  S  K  
                    Query_12240  91   AGTGGGTCTCAGCGATTTATACCAGTGGTAGCACATACTACACAGACTCCGTCATGGGCCGATTCACCATCTCTAGAGACCCTTCCAAGG  180
V  91.6% (218/238)  IGHV3-53*01  137  ............TT.......G.G.................G..........G.A..................C......AA.......A  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->    
                                      D  T  M  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  S  G  Y  I  S  G  Y  P  Y  W  
                    Query_12240  181  ACACGATGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGCTCAGGATACATCTCTGGTTACCCCTACTGGG  270
V  91.6% (218/238)  IGHV3-53*01  227  .....C....................................................--------------------------------  284
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                   
D  88.9% (16/18)    IGHD5-18*01  3    --------------------------------------------------------------.......G..A.......----------  20
J  100.0% (38/38)   IGHJ4*02     11   ----------------------------------------------------------------------------------........  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_12240  271  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  300
J  100.0% (38/38)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_220571

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           353     9e-100
IGHD3-9*01                                                                                            16.1    2.1   
IGHJ2*01                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	CTGC	TTACGATA	CTA	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCTGCTTACGATACTAGGTACTTCGATCTC	ARAAYDTRYFDL	239	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	28	25	25	0	0	100
CDR1-IMGT	29	52	24	24	0	0	100
FR2-IMGT	53	103	51	49	2	0	96.1
CDR2-IMGT	104	124	21	21	0	0	100
FR3-IMGT	125	238	114	109	5	0	95.6
CDR3-IMGT (germline)	239	245	7	6	1	0	85.7
Total	N/A	N/A	242	234	8	0	96.7


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W
                    Query_12241  4    CCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGTCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTG  93
V  96.7% (234/242)  IGHV3-53*01  51   ....................................................AG....................................  140
                                        L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W

                                      ---------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IM
                                        V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  S  K  N  T
                    Query_12241  94   GGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCCTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACAC  183
V  96.7% (234/242)  IGHV3-53*01  141  ..............................................G...........................................  230
                                        V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T

                                      GT----------------------------------------------------><-------------CDR3-IMGT------------
                                        V  F  L  H  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  A  Y  D  T  R  Y  F  D  L
                    Query_12241  184  GGTGTTTCTTCACATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCAAGAGCTGCTTACGATACTAGGTACTTCGATCT  273
V  96.7% (234/242)  IGHV3-53*01  231  .C...A......A................................G...........G....----------------------------  292
                                        L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                              
D  100.0% (8/8)     IGHD3-9*01   4    ------------------------------------------------------------------........----------------  11
J  100.0% (48/48)   IGHJ2*01     6    -----------------------------------------------------------------------------.............  18

                                      >                                  
                                        W  G  R  G  T  L  V  T  V  S  S  
                    Query_12241  274  CTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  308
J  100.0% (48/48)   IGHJ2*01     19   ...................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_220570

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	N/A	TCGACCCTGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCGACCCTGCTTGACAAA	ASTLLDK	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12242  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGCACCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (229/245)  IGHV3-23*01  47   ....................................C........G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  T  G  I  S  G  S  G  E  N  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_12242  91   AGTGGGTCACAGGTATCAGTGGTAGTGGTGAAAACACATACTACGCAGACTCCGTGAAGGGCCGTTTCACCGTCTCCAGAGACAATTCCA  180
V  93.5% (229/245)  IGHV3-23*01  137  ........T...C...T.............GT.G..............................G......A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  T  V  S  V  Q  M  D  S  L  S  A  E  D  T  A  V  Y  Y  C  A  S  T  L  L  D  K  W  G  
                    Query_12242  181  AGAACACGGTGTCTGTGCAAATGGACAGCCTGAGCGCCGAGGACACGGCCGTATATTACTGTGCGTCGACCCTGCTTGACAAATGGGGCC  270
V  93.5% (229/245)  IGHV3-23*01  227  ........C...A.C........A..........A..............................-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  92.9% (39/42)    IGHJ4*02     7    ---------------------------------------------------------------------------.....T.C.......  21

                                                                 
                                      Q  G  T  L  V  T  V  S  P  
                    Query_12242  271  AGGGAACCCTGGTCACCGTCTCCCCAG  297
J  92.9% (39/42)    IGHJ4*02     22   .......................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_220577

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           297     7e-83
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGTGTACGGAAATCAG	TATGATGGTAGTGGTTA	CCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTGTACGGAAATCAGTATGATGGTAGTGGTTACCCTGACTCC	ARGVYGNQYDGSGYPDS	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	216	26	0	89.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  S  G  S  I  S  A  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E  
                    Query_12243  4    CCCTGAGACTCTCCTGTACTGTCTCTAGTGGCTCCATCAGTGCTTACTACTGGAGTTGGGTCCGGCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  89.3% (216/242)  IGHV4-59*08  50   .....TCC...A....C.........G..............AG............C...A......................A.......  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  N  L  Y  Y  R  G  S  T  R  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  K  
                    Query_12243  94   GGATTGGGAATCTGTATTACAGAGGTAGTACCAGATACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAGC  183
V  89.3% (216/242)  IGHV4-59*08  140  ........T..A.C........T..G..C....AC....................................G................C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      Q  F  S  L  E  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  Y  G  N  Q  Y  D  G  
                    Query_12243  184  AATTCTCCCTGGAGGTGCGCTCTGTCACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGGGGTGTACGGAAATCAGTATGATGGTA  273
V  89.3% (216/242)  IGHV4-59*08  230  .G.........A..C..A.......G....................................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  94.1% (16/17)    IGHD3-22*01  8    --------------------------------------------------------------------------------......A...  17

                                      ---------------->                                  
                                      S  G  Y  P  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12243  274  GTGGTTACCCTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  94.1% (16/17)    IGHD3-22*01  18   .......--------------------------------------------  24
J  97.6% (40/41)    IGHJ4*02     8    ----------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_220576

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           410     1e-116
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ2*01                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGA	TACTATGACAGTAGTGGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTC	ARDGYYDSSGYYYDL	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  S  Y  S  F  S  S  H 
                    Query_12244  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTAGTTACAGTTTTAGCAGCCAC  91
V  95.2% (276/290)  IGHV1-18*04  7    .....................................................................G......CC....C....T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  D  Y  A  R 
                    Query_12244  92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGGTGGATCAGCGGTTACAATGGTAACACAGACTATGCACGG  181
V  95.2% (276/290)  IGHV1-18*04  97   ................................A.................A..........C................A.........A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  A  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  T  S  D  D  T  A 
                    Query_12244  182  AAGTTCCAGGGCAGAGTCACCATGACCGCAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGACATCTGACGACACGGCC  271
V  95.2% (276/290)  IGHV1-18*04  187  ...C.......................A.............................................G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  D  G  Y  Y  D  S  S  G  Y  Y  Y  D  L  W  G  R  G  T  L  V  T  V  S  S 
                    Query_12244  272  GTGTATTACTGTGCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTCTGGGGCCGGGGAACCCTGGTCACTGTCTCCTCA  361
V  95.2% (276/290)  IGHV1-18*04  277  ...............A....----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  95.2% (20/21)    IGHD3-22*01  5    ------------------------........T............---------------------------------------------  25
J  91.3% (42/46)    IGHJ2*01     8    ---------------------------------------------....T...T...........T..C.....................  52

                                       
                                       
                    Query_12244  362  G  362
J  91.3% (42/46)    IGHJ2*01     53   .  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_220575

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           367     6e-104
IGHD1-26*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GA	GGTGTAGTGGGAGC	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTAC	ARGGVVGAPFDY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	69	6	0	92
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	46	5	0	90.2
CDR2-IMGT	151	174	24	17	7	0	70.8
FR3-IMGT	175	288	114	105	9	0	92.1
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	265	30	0	89.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  T  A  G  G  S  F  S 
                    Query_12245  1    CAGGTTCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGACCGCTGGAGGTAGTTTCAGC  90
V  89.8% (265/295)  IGHV1-69*06  1    .....G.................G...........................................A.G.TT.......C.CC......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  A  I  S  W  M  R  Q  A  P  G  Q  G  L  E  W  M  G  A  I  M  P  L  Y  G  I  G  N  Y 
                    Query_12245  91   AGCTATGCTATCAGTTGGATGCGACAGGCCCCTGGGCAAGGGCTTGAGTGGATGGGAGCAATCATGCCTCTATATGGCATAGGAAACTAC  180
V  89.8% (265/295)  IGHV1-69*06  91   ..............C...G................A......................GG.....C...A.C.T...T.C..C.......  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  K  V  T  I  T  A  D  T  S  T  R  T  A  Y  M  E  L  S  G  L  R  S  A  D 
                    Query_12245  181  GCACAGAAGTTCCAGGGCAAAGTCACGATTACCGCGGACACATCCACGAGGACAGCCTACATGGAGTTGAGTGGCCTGAGATCTGCGGAC  270
V  89.8% (265/295)  IGHV1-69*06  181  ...................G....................A.........C...............C....CA............A....  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  M  Y  Y  C  A  R  G  G  V  V  G  A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_12245  271  ACGGCCATGTATTATTGTGCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTACTGGGGCCAGGGAACTCTGGTCACCGTCTCCCCAG  358
V  89.8% (265/295)  IGHV1-69*06  271  ......G.......C..........---------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                 
D  92.9% (13/14)    IGHD1-26*01  1    ---------------------------...A..........-----------------------------------------------  14
J  95.5% (42/44)    IGHJ4*02     5    --------------------------------------------........................C...............T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_220574

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           360     1e-101
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	CCGC	TATTACTATAATATTAGTG	CCGGGGAACAAGA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCCGCTATTACTATAATATTAGTGCCGGGGAACAAGATGACTAC	TRYYYNISAGEQDDY	249	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	112	2	0	98.2
CDR3-IMGT (germline)	249	250	2	2	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  T  S  G  F  T  F  G  D  Y  T  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12246  1    GGTCCCTGAGACTCTCCTGTACAACCTCAGGATTCACCTTTGGTGATTATACTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-49*04  47   .......................G.T..T.....................G.......................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  T  K  A  Y  G  G  A  T  E  Y  A  A  S  V  K  G  R  F  T  L  S  R  D  
                    Query_12246  91   AGTGGGTAGGTTTCATTAGAACCAAAGCTTACGGTGGGGCAACGGAATACGCCGCGTCTGTGAAAGGCAGATTCACCCTCTCAAGAGATG  180
V  96.0% (240/250)  IGHV3-49*04  137  .....................G.........T......A....A.................................A............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------------CDR3
                                      D  S  K  S  I  P  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  Y  Y  Y  N  I  
                    Query_12246  181  ATTCCAAAAGCATCCCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCCGCTATTACTATAATATTA  270
V  96.0% (240/250)  IGHV3-49*04  227  ..............G.......................................................--------------------  296
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  89.5% (17/19)    IGHD3-22*01  2    --------------------------------------------------------------------------.........G...G..  17

                                      -IMGT----------------->                                  
                                      S  A  G  E  Q  D  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_12246  271  GTGCCGGGGAACAAGATGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  327
D  89.5% (17/19)    IGHD3-22*01  18   ...------------------------------------------------------  20
J  97.6% (40/41)    IGHJ4*02     8    ----------------....................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_220579

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           286     1e-79
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	ACGAA	ACGTTTGG	AAGGGGGGCGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAACGAAACGTTTGGAAGGGGGGCGCGTTTGATATC	ARQRNVWKGGAFDI	250	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	63	36	25	5	6	69.4
FR2-IMGT	64	114	51	47	4	0	92.2
CDR2-IMGT	115	135	21	16	5	0	76.2
FR3-IMGT	136	249	114	99	15	0	86.8
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	222	29	6	86.4


Alignments

                                      <--------FR1-IMGT---------><-------------CDR1-IMGT------------><--------------------FR2-IM
                                       T  L  S  L  T  C  T  V  S  G  A  S  M  S  I  D  S  S  S  Y  C  W  A  W  I  R  Q  P  P  G 
                    Query_12247  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGCCTCCATGAGTATCGATAGTAGTAGTTACTGCTGGGCCTGGATCCGCCAGCCCCCAGGG  90
V  86.4% (222/257)  IGHV4-39*01  49   .............................T.G......C..C.------............A.....G......................  132
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S        S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  G  L  E  W  V  G  N  I  Y  H  T  G  V  T  Y  S  N  P  S  L  S  S  R  V  S  T  Y  I  D 
                    Query_12247  91   AAGGGGCTGGAGTGGGTTGGCAATATCTATCACACTGGGGTCACCTACTCCAATCCGTCCCTCAGCAGTCGAGTCAGCACATACATAGAT  180
V  86.4% (222/257)  IGHV4-39*01  133  ...............A....G.G.......T.T.G....AG........A...C..........AG..........C..T..C.G....C  222
                                       K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><----------------CDR3
                                       M  S  M  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  R  N  V  W 
                    Query_12247  181  ATGTCCATGAACCAGTTTTCCCTGAGGCTGACCTCCGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACAACGAAACGTTTGG  270
V  86.4% (222/257)  IGHV4-39*01  223  .C.....A.........C.......A.....G...T.........................................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  100.0% (8/8)     IGHD3-16*01  12   ----------------------------------------------------------------------------------........  19

                                      -IMGT--------------->                                  
                                       K  G  G  A  F  D  I  W  S  Q  G  T  L  V  T  V  S  S  
                    Query_12247  271  AAGGGGGGCGCGTTTGATATCTGGAGCCAAGGGACATTGGTCACCGTCTCTTCAG  325
J  95.3% (41/43)    IGHJ3*02     8    ------------............G...........A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_220578

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         386     2e-109
IGHD6-19*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCTTAAGGTCAATCGCGTC	CAGTGGCTGG	GCGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCA	ARHPLRSIASSGWAS	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	68	6	0	91.9
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	102	12	0	89.5
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	270	23	0	92.2


Alignments

                                        <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                           M  Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  T  F  T  
                    Query_12248    3    AAATGCAGCTGGTGCAGTCTGGAGGAGAGGTGAAGAAGCCCGGGGAGTCTTTGAGGATTTCCTGTAAGGCTTCTGGATACACCTTTACCA  92
V  92.2% (270/293)  IGHV5-10-1*01  2    ..G.....................C.........A...............C.......C..........G...........G........  91
                                           V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  

                                        T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                        N  Y  W  I  S  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  S  Y  
                    Query_12248    93   ACTACTGGATCAGCTGGGTGCGTCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGACCCTAGTGACTCTTATACCAGCTACA  182
V  92.2% (270/293)  IGHV5-10-1*01  92   G.....................C...A.....................................T...................A.....  181
                                        S  Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  

                                        ----------------------------------------------FR3-IMGT------------------------------------
                                        S  P  S  F  D  G  N  V  T  I  S  V  G  K  S  I  S  T  A  Y  L  Q  W  S  S  L  M  A  S  D  
                    Query_12248    183  GTCCGTCCTTCGACGGCAACGTCACCATCTCAGTTGGCAAGTCCATCAGTACTGCCTATTTGCAGTGGAGCAGCCTGATGGCCTCGGACA  272
V  92.2% (270/293)  IGHV5-10-1*01  182  .C.........C.A...C...............C..A............C........CC..................A...........  271
                                        S  P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                        ----------------><-----------------CDR3-IMGT----------------->                            
                                        T  A  M  Y  Y  C  A  R  H  P  L  R  S  I  A  S  S  G  W  A  S  W  G  Q  G  T  L  V  T  V  
                    Query_12248    273  CCGCCATGTATTATTGTGCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCATGGGGCCAGGGAACCCTGGTCACCGTCT  362
V  92.2% (270/293)  IGHV5-10-1*01  272  .............C.........-------------------------------------------------------------------  294
                                        T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01    9    ----------------------------------------------..........----------------------------------  18
J  100.0% (34/34)   IGHJ4*02       15   --------------------------------------------------------------............................  42

                                              
                                        S  S  
                    Query_12248    363  CCTCAG  368
J  100.0% (34/34)   IGHJ4*02       43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_294538

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           265     5e-73
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	GCCCACCGGGTG	AGCAATGGCTGG	GGAAGGTACTATAATAAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCCCACCGGGTGAGCAATGGCTGGGGAAGGTACTATAATAATGGTATGGACGCC	ARAHRVSNGWGRYYNNGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	20	4	6	66.7
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	211	32	6	84.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  T  A  N  D  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_12249  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCTTTCACTGCCAATGATTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  84.7% (211/249)  IGHV4-34*12  49   .......................C..T........C....G..G------...C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G        Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  H  L  G  G  A  K  Y  N  P  S  L  Q  S  R  V  T  I  S  L  D  T  S 
                    Query_12249  91   CTGGAATGGATAGGGGAAATCATTCATCTTGGAGGCGCCAAGTACAACCCGTCCCTCCAGAGTCGAGTTACCATTTCACTAGACACGTCC  180
V  84.7% (211/249)  IGHV4-34*12  133  .....G.....T...............AG....A..A....C...............A..........C.....A...G...........  222
                                       L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  N  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  A  H  R  V  S  N  G 
                    Query_12249  181  AAGAATCAATTCTCCCTGAAATTGAATTCTGTTAGCGCCGCGGACACGGCTGTGTATTATTGTGCAAGAGCCCACCGGGTGAGCAATGGC  270
V  84.7% (211/249)  IGHV4-34*12  223  .....C..G...........GC...GC.....G.C........................C.....G...---------------------  291
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  R  Y  Y  N  N  G  M  D  A  G  G  Q  G  T  A  V  S  V  S  S 
                    Query_12249  271  TGGGGAAGGTACTATAATAATGGTATGGACGCCGGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.1% (41/45)    IGHJ6*02     18   ---------------------..........T.T..............A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_34571

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           308     4e-86
IGHD3-10*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGG	CCGAAGGTACCT	TGGGTCGGGGAG	ATTTATACCGTTTTCG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCGAAGGTACCTTGGGTCGGGGAGATTTATACCGTTTTCGGACTAT	ARGRRYLGSGRFIPFSDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	221	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  E  V  Y  G  G  S  F  N  N  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12250  1    ACCCTGTCCCTCACCTGCGAAGTCTATGGTGGGTCCTTCAATAATTACTTCTGGAACTGGATCCGTCAGCCCCCAGGAAAGGGTCTGGAG  90
V  90.2% (221/245)  IGHV4-34*01  49   ...................CT...................G.GG.....A.....G.........C...........G.....G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  V  S  H  S  G  N  T  N  Y  N  L  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_12250  91   TGGATTGGGGAAGTCAGTCATAGTGGCAACACCAACTACAACCTGTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  90.2% (221/245)  IGHV4-34*01  139  ............A...A.........A.G..............C............................G.................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  Y  S  L  N  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  Y  L  G  S  G  R 
                    Query_12250  181  CAGTACTCCCTGAACCTGGCTTCTGTGACCGCCGCGGACACGGCTGTCTACTACTGTGCGAGGGGCCGAAGGTACCTTGGGTCGGGGAGA  270
V  90.2% (221/245)  IGHV4-34*01  229  ....T.........G...AGC..........................G..T...........A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  91.7% (11/12)    IGHD3-10*01  10   -----------------------------------------------------------------------------...T........-  21

                                      -------------------->                                  
                                       F  I  P  F  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12250  271  TTTATACCGTTTTCGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.5% (39/40)    IGHJ4*02     9    ---------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_252549

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           386     1e-109
IGHD3-10*01                                                                                           23.8    0.011 
IGHJ1*01                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TAACGGCG	GGTTCGGGGAGT	N/A	CTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAACGGCGGGTTCGGGGAGTCTGAATACTTCCAGCAC	ARHNGGFGESEYFQH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	249	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_12251  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  99.2% (249/251)  IGHV4-39*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  C  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12251  91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACTGCCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  99.2% (249/251)  IGHV4-39*01  139  .............................................AA...........................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  N  G  G  F  G  E 
                    Query_12251  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATAACGGCGGGTTCGGGGAG  270
V  99.2% (249/251)  IGHV4-39*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD3-10*01  11   -------------------------------------------------------------------------------...........  21

                                      ----------------->                                  
                                       S  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12251  271  TCTGAATACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (12/12)   IGHD3-10*01  22   .---------------------------------------------------  22
J  100.0% (51/51)   IGHJ1*01     2    -...................................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_252548

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     2e-109
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCCCGGCAGG	GTGGGATCTACT	TG	ACGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTC	ARHGPAGWDLLDAMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	269	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  N  F  N  S  N
                    Query_12252  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGTTCTGGATACAACTTTAACAGTAA  90
V  92.4% (269/291)  IGHV5-51*01  6    ....................................C.............A..........................G.....C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_12252  91   CTGGATCGGATGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGGGACTCTGATACCAGATATAGGCC  180
V  92.4% (269/291)  IGHV5-51*01  96   .........C..................................................T.....T.................C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  P  I  T  A  D  K  S  T  T  T  A  Y  L  R  W  S  S  P  K  A  S  D  P  A
                    Query_12252  181  GTCCTTCCAAGGCCACGTCCCCATTACAGCCGACAAGTCCACCACCACCGCCTACCTGCGGTGGAGCAGCCCGAAGGCCTCGGACCCCGC  270
V  92.4% (269/291)  IGHV5-51*01  186  ...............G...A....CT...............T..G..............A...........T.............A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        T  Y  Y  C  A  R  H  G  P  A  G  W  D  L  L  D  A  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_12252  271  CACTTATTACTGTGCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  92.4% (269/291)  IGHV5-51*01  276  ..TG.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD1-26*01  7    ---------------------------------......G.....---------------------------------------------  18
J  97.9% (46/47)    IGHJ6*02     16   -----------------------------------------------...G.......................................  58

                                          
                                        S 
                    Query_12252  361  CTCA  364
J  97.9% (46/47)    IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_252547

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            283     1e-78
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GAATGAACCCTGAATT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATGAACCCTGAATTC	ARGMNPEF	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	40	11	0	78.4
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	215	34	0	86.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  R  G  H  W  M  T  W  I  R  H  L  P  D  K  G  L  
                    Query_12253  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTCGTGGCCACTGGATGACTTGGATTCGCCACCTTCCAGATAAGGGGCTGC  90
V  86.3% (215/249)  IGHV3-7*01   47   ....................................C....A..A..T.T.......GC...G.C.....GGC.....GG.........G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  N  I  K  D  D  G  S  E  E  H  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12253  91   AGTGGGTGGCCAATATAAAGGACGATGGAAGTGAAGAGCACTATGGTGACTCTGTGAAGGGCCGATTCACCATCTCCCGAGACAACGCCC  180
V  86.3% (215/249)  IGHV3-7*01   137  .............C......C.A...........GA.AT......TG..............................A...........A  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      Q  N  S  L  F  L  Q  M  N  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  M  N  P  E  F  W  
                    Query_12253  181  AGAACTCTCTGTTTTTGCAGATGAACAACCTGAGAGTCGAAGACACGGCTGTATATTACTGTGCGAGAGGAATGAACCCTGAATTCTGGG  270
V  86.3% (215/249)  IGHV3-7*01   227  .......A....A.C....A.......G........C...G...........G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  94.3% (33/35)    IGHJ4*02     14   -------------------------------------------------------------------------------------.....  18

                                                                    
                                      G  Q  G  T  L  V  I  V  S  S  
                    Query_12253  271  GCCAGGGAACCCTGGTCATCGTCTCGTCAG  300
J  94.3% (33/35)    IGHJ4*02     19   ..................C......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_252546

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     2e-90
IGHD6-19*01                                                                                           19.9    0.16 
IGHJ1*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	TTCCTCGGCGA	GTATTGCACTGGCTGG	AACATTTGGGGT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTCCTCGGCGAGTATTGCACTGGCTGGAACATTTGGGGTC	ARGSSASIALAGTFGV	261	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	43	7	0	86
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	47	4	0	92.2
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	99	15	0	86.8
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	237	31	0	88.4


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  S  C  G  V  R  G  G  S  F  S  G  S  Y  W  A  W  I  R  
                    Query_12254  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCTCTTGCGGTGTCCGTGGTGGGTCCTTCAGTGGCTCTTACTGGGCCTGGATCCGCC  90
V  88.4% (237/268)  IGHV4-34*01  26   ........T.......T..................A.C....C....TA..................T.AC......AG...........  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  P  Q  Y  N  P  S  L  K  S  R  V  S  
                    Query_12254  91   AGCCCCCAGGCAAGGGGCTGGAGTGGATTGGCGAAATCAATCATAGTGGAAGTCCCCAATACAACCCGTCCCTCAAGAGTCGAGTCAGTA  180
V  88.4% (237/268)  IGHV4-34*01  116  ..........G....................G....................CA..A.C............................CC.  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  A  V  D  T  S  N  N  H  L  S  L  R  M  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_12254  181  TCGCAGTGGACACGTCGAACAACCACCTCTCCCTGAGGATGACCTCTGTTACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGTT  270
V  88.4% (237/268)  IGHV4-34*01  206  .AT....A........C..G.....GT.........A.C...G......G......................................--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  

                                      ----------CDR3-IMGT------------------>                                  
                                      S  S  A  S  I  A  L  A  G  T  F  G  V  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_12254  271  CCTCGGCGAGTATTGCACTGGCTGGAACATTTGGGGTCTGGGGCCAGGGCACCCTAGTCACCGTCTCCGCAG  342
D  87.5% (14/16)    IGHD6-19*01  3    ---------....A...G.......-----------------------------------------------  18
J  94.3% (33/35)    IGHJ1*01     18   -------------------------------------..................G............T...  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_252545

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           39.1    3e-07
IGHJ2*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTGCCCATGA	ATTACTATGATAGTAGTGGCTCTTAC	ATTGGGAGCGTTA	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTGCCCATGAATTACTATGATAGTAGTGGCTCTTACATTGGGAGCGTTAGGTACTTCGATTTC	ARDVPMNYYDSSGSYIGSVRYFDF	238	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  A  S  G  G  S  I  N  S  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_12255  1    ACCCTGTCCCTCACCTGCACTGCCTCTGGCGGCTCCATCAATAGTTTTTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ......................T......T..........G.....AC........C............C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  A  K  N 
                    Query_12255  91   TGGATTGGCTATGTCTATTCCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGCCGAGTCACCTTATCAGTGGACACGGCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G...A......A....................................T.........A.......A......T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------------C
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  V  P  M  N  Y  Y  D  S 
                    Query_12255  181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATGTGCCCATGAATTACTATGATAGT  270
V  93.5% (229/245)  IGHV4-59*01  229  .............A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.3% (24/26)    IGHD3-22*01  3    ----------------------------------------------------------------------------..............  16

                                      DR3-IMGT------------------------------>                                  
                                       S  G  S  Y  I  G  S  V  R  Y  F  D  F  W  G  R  G  T  L  V  T  V  S  S  
                    Query_12255  271  AGTGGCTCTTACATTGGGAGCGTTAGGTACTTCGATTTCTGGGGCCGTGGCACCCTGGTCACTGTCTCTTCAG  343
D  92.3% (24/26)    IGHD3-22*01  17   .....T.A....-------------------------------------------------------------  28
J  95.8% (46/48)    IGHJ2*01     6    -------------------------...........C...............................C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_4939

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAGTTAT	CAGGGT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGGCTCCACCCC	ARSGSGSYQGWLHP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	222	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  P  Y  Y  W  I  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12256  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGTCCTTACTACTGGATCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.7% (222/242)  IGHV4-59*01  49   ..................A............G..........AG...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  H  I  F  Y  T  G  S  T  K  Y  K  P  S  L  K  S  R  V  T  I  S  L  G  T  S  R  K 
                    Query_12256  91   TGGCTTGGCCATATCTTTTACACTGGGAGCACCAAATACAAGCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGGCACGTCCAGGAAG  180
V  91.7% (222/242)  IGHV4-59*01  139  ...A....GT......A.....G............C.....C..........................A...G...A........A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  S  Y  Q  G  W 
                    Query_12256  181  CAGTTCTCCCTGAAACTGCGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGG  270
V  91.7% (222/242)  IGHV4-59*01  229  ..............G...A.C.........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (15/15)   IGHD3-10*01  11   ------------------------------------------------------------------...............---------  25
J  87.0% (40/46)    IGHJ5*02     6    ---------------------------------------------------------------------------------------...  8

                                      -------->                                  
                                       L  H  P  W  G  L  G  R  L  V  I  V  S  S  
                    Query_12256  271  CTCCACCCCTGGGGCCTGGGAAGACTGGTCATCGTCTCCTCAG  313
J  87.0% (40/46)    IGHJ5*02     9    T..G............A.....CC.......C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_252543

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           325     3e-91
IGHD6-6*01                                                                                            19.9    0.18 
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACCCGA	AGTAAAGCAGGTCGTC	ACCAAAGCACGCCCTTTACACCGGGATATAGAAAAAT	ATTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACCCGAAGTAAAGCAGGTCGTCACCAAAGCACGCCCTTTACACCGGGATATAGAAAAATATTCCTACTTCTACTCCGCTATGGACGTC	AREPEVKQVVTKARPLHRDIEKYSYFYSAMDV	240	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  K  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_12257  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAAAAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  92.6% (226/244)  IGHV4-59*01  50   .....TCC...A....C......................GT.G...............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  S  S  S  G  S  T  K  Y  N  P  S  L  Q  S  R  V  T  V  S  V  D  T  S  T  N  
                    Query_12257  94   GGATTGGGTATATCTCTTCCAGTGGGAGCACCAAGTACAACCCCTCCCTCCAGAGTCGAGTCACCGTATCAGTAGACACGTCCACGAACC  183
V  92.6% (226/244)  IGHV4-59*01  140  ...............A..A...............C...............A..............A..................A.....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><---------------------------------
                                      R  F  S  L  M  L  Y  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  P  E  V  K  Q  V  V  T  
                    Query_12257  184  GGTTCTCCCTGATGCTGTACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAACCCGAAGTAAAGCAGGTCGTCACCA  273
V  92.6% (226/244)  IGHV4-59*01  230  A...........A....AG.............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  87.5% (14/16)    IGHD6-6*01   2    ----------------------------------------------------------------------....T.....C.....----  17

                                      ----------CDR3-IMGT------------------------------------------>                            
                                      K  A  R  P  L  H  R  D  I  E  K  Y  S  Y  F  Y  S  A  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_12257  274  AAGCACGCCCTTTACACCGGGATATAGAAAAATATTCCTACTTCTACTCCGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCT  363
J  93.5% (58/62)    IGHJ6*02     1    ---------------------------------...A.....A.....A..G......................................  57

                                           
                                      S  S 
                    Query_12257  364  CCTCA  368
J  93.5% (58/62)    IGHJ6*02     58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_252542

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAACA	TATGACT	TATAGCAGT	AGTCCATTA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATATGACTTATAGCAGTAGTCCATTAGACTAC	AKHMTYSSSPLDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	14	7	0	66.7
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	222	29	0	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  A  S  V  S  S  G  D  Y  Y  W  G  W  I  R  Q  P  P  G  R  G 
                    Query_12258  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCGTCAGTAGTGGTGACTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAGGGGG  90
V  88.4% (222/251)  IGHV4-39*01  49   ..................A............G....A....C...A..AGT..................................A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  Y  N  T  G  Y  P  Y  Y  S  L  S  L  K  S  R  V  T  I  S  V  D  S  S 
                    Query_12258  91   CTGGAGTGGCTTGGGAGTATCTATAATACTGGATATCCCTACTATAGTTTGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACTCGTCC  180
V  88.4% (222/251)  IGHV4-39*01  139  .........A..............T...G...GAGCA.......C.ACCC..................................A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  D  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  H  M  T  Y  S  S  S 
                    Query_12258  181  AAGAACGATTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTTTATTTCTGTGCGAAACATATGACTTATAGCAGTAGT  270
V  88.4% (222/251)  IGHV4-39*01  229  ......C.G..........A.................................G....A........G...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD6-19*01  4    ------------------------------------------------------------------------------.........---  12

                                      ----------->                                  
                                       P  L  D  Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_12258  271  CCATTAGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCTTCAG  316
J  95.0% (38/40)    IGHJ4*02     9    ------.............A.....................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_252540

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           353     9e-100
IGHD5-12*01                                                                                           12.2    32    
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTATCGACTG	TACCATTAC	CCCCTGCCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTATCGACTGTACCATTACCCCCTGCCGTTTTGACTTC	ASLIDCTITPCRFDF	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  N  S  R  N  Y  Y  W  G  W  I  R  P  P  P  G  K  G 
                    Query_12259  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAACAGTCGTAATTACTACTGGGGCTGGATCCGCCCGCCCCCAGGGAAGGGG  90
V  95.6% (237/248)  IGHV4-39*01  49   ..................A.....................G....A...G.......................A................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  N  Y  S  G  T  T  Y  Y  T  A  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_12259  91   CTGGAGTGGATTGGGAGTATCAATTATAGTGGGACCACCTACTACACCGCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  95.6% (237/248)  IGHV4-39*01  139  .....................T............G...........A.C.........................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  I  D  C  T  I  T 
                    Query_12259  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGCCTTATCGACTGTACCATTACC  270
V  95.6% (237/248)  IGHV4-39*01  229  ...........................................................C........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  88.9% (8/9)      IGHD5-12*01  15   --------------------------------------------------------------------------------...G.....-  23

                                      ----------------->                                  
                                       P  C  R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12259  271  CCCTGCCGTTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  97.7% (42/43)    IGHJ4*02     6    ---------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_7164

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     2e-90
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCTCAG	AGTAGTACCAACTGTTATG	GGCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCAGAGTAGTACCAACTGTTATGGGCTTCTACTACTACGGTATGGACGTC	ARGLRVVPTVMGFYYYGMDV	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	240	117	109	5	3	93.2
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	229	16	3	92.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  G  G  S  F  S  T  Y  Y  W  T  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_12260  1    ACCCTGTCCCTCACCTGCACTGTCTATGGTGGGTCCTTCAGCACTTACTACTGGACCTGGATCCGCCAGACCCCAGGGAAGGGGCTGGAG  90
V  92.3% (229/248)  IGHV4-34*01  49   ..................G......................TGG...........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><-----------------------------------------------------FR3
                                       W  I  G  E  I  Y  V  G  G  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_12260  91   TGGATTGGGGAAATCTATGTTGGTGGAGGCACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAG  180
V  92.3% (229/248)  IGHV4-34*01  139  ...............A..CA.A.....A.....---...................................A..................  225
                                       W  I  G  E  I  N  H  S  G  S  T     N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                      -IMGT------------------------------------------------------><-------------------------CDR3
                                       N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  G  L  R  V  V  P  T  V 
                    Query_12260  181  AACCAGTTCTCCCTGAACCTGAGCTCTGTGACCGCCGCGGACACGGCTATGTACTACTGCGCGAGAGGCCTCAGAGTAGTACCAACTGTT  270
V  92.3% (229/248)  IGHV4-34*01  226  .................G..............................G....T.....T........----------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                      
D  89.5% (17/19)    IGHD2-2*01   11   --------------------------------------------------------------------------..........G...C.  26

                                      -IMGT------------------------>                                 
                                       M  G  F  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12260  271  ATGGGCTTCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
D  89.5% (17/19)    IGHD2-2*01   27   ...------------------------------------------------------------  29
J  100.0% (55/55)   IGHJ6*02     8    --------.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_34575

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-3*01                                                                                            10.3    118   
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GCTTG	ACGAT	CGCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGCTTGACGATCGCATACTACTTTGACTAC	ATGLTIAYYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12261  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (242/250)  IGHV4-31*03  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  D  T  S 
                    Query_12261  91   CTAGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTTACCATATCACTAGACACGTCT  180
V  96.8% (242/250)  IGHV4-31*03  139  ..G.......................................................A...................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  D  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  L  T  I  A  Y  Y 
                    Query_12261  181  AAGGACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGCTTGACGATCGCATACTAC  270
V  96.8% (242/250)  IGHV4-31*03  229  ...A...............A.................................G.............G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-3*01   6    ---------------------------------------------------------------------------.....----------  10
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12261  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_265012

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           346     2e-97
IGHD3-9*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCGGTT	GTATTACGATATCTTG	CGGCGGGGAGG	CTACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGTTGTATTACGATATCTTGCGGCGGGGAGGCTACAACGGTTTGGACGTC	ARGRLYYDILRRGGYNGLDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  V  G  S  F  S  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12262  1    ACCCTGTCCCTCACCTGCGCTGTCTATGTTGGGTCCTTCAGTGATTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (233/245)  IGHV4-34*01  49   ............................G..............G..............................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  N  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12262  91   TGGATTGGCGAAATCAATCATAGTGGATCCAACAGCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-34*01  139  ........G..................AG..C..A.......................................A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  D  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  L  Y  Y  D  I  L  R 
                    Query_12262  181  CAGTTCTCCCTGAAGCTGGACTCCGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCCGGTTGTATTACGATATCTTGCGG  270
V  95.1% (233/245)  IGHV4-34*01  229  ..................AG...T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  93.8% (15/16)    IGHD3-9*01   1    -----------------------------------------------------------------------............T...---  16

                                      GT------------------------>                                 
                                       R  G  G  Y  N  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12262  271  CGGGGAGGCTACAACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
J  96.2% (50/52)    IGHJ6*02     11   --------....T.....A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_269197

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           335     4e-94
IGHD3-16*02                                                                                           33.4    1e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCAGGCCGG	TTACGTTTGGGGGAGGTTTCGTT	TTTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCAGGCCGGTTACGTTTGGGGGAGGTTTCGTTTTTCCTACGTTGACCAC	ARGQAGYVWGRFRFSYVDH	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  E  S  F  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_12263  4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGAGTCCTTCAGTGGTTACTACTGGAACTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  93.9% (229/244)  IGHV4-34*01  50   .....TCC...A..................G.......................G...................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  R  H  S  G  S  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_12263  94   GGATTGGGGAAATCAGGCATAGTGGAAGCACCTACTACAACGCGTCCCTCAAGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAACC  183
V  93.9% (229/244)  IGHV4-34*01  140  ...............AT...............A........C...............................A................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      Q  F  S  L  R  L  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  Q  A  G  Y  V  W  G  R  
                    Query_12263  184  AGTTCTCCCTGAGGTTGACCTCTGTGAGCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCCAGGCCGGTTACGTTTGGGGGAGGT  273
V  93.9% (229/244)  IGHV4-34*01  230  ............A.C...G........C....................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  91.3% (21/23)    IGHD3-16*02  10   -------------------------------------------------------------------------...............T.  26

                                      ---------------------->                                  
                                      F  R  F  S  Y  V  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12263  274  TTCGTTTTTCCTACGTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  91.3% (21/23)    IGHD3-16*02  27   A.....---------------------------------------------------  32
J  95.7% (45/47)    IGHJ4*02     2    ----------....T.....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_269194

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            283     1e-78
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GTTCAGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGGTTCAGGGTGGCTGGCTGACTCC	AGGSGWLADS	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	215	34	0	86.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  V  S  E  F  T  F  R  N  F  W  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12264  1    GGTCCCTGAGACTCTCCTGTGTAGTCTCTGAATTCACCTTTAGAAACTTTTGGATAAACTGGGTCCGTCAGGCTCCAGGGAAGGGTCTGG  90
V  86.3% (215/249)  IGHV3-7*01   47   .....................C..C.....G............T.G..A......G.G.........C.................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  I  I  Q  Q  D  G  S  D  E  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  A  
                    Query_12264  91   AGTGGCTGGCCATCATACAGCAGGATGGAAGTGACGAATACTATGCGGACTCGGTGAAGGGCCGCTTCACCATCTCCAGAGACACCGCCA  180
V  86.3% (215/249)  IGHV3-7*01   137  .....G......A....A....A...........GA.........T......T...........A...................A.....  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  S  A  V  F  L  Q  M  D  S  L  R  A  D  D  T  A  V  Y  F  C  A  G  G  S  G  W  L  A  D  
                    Query_12264  181  AGAGTGCGGTCTTTCTGCAAATGGACAGCCTGCGGGCCGACGACACGGCTGTGTACTTCTGTGCGGGAGGTTCAGGGTGGCTGGCTGACT  270
V  86.3% (215/249)  IGHV3-7*01   227  ...ACT.AC.G.A..........A........A.A.....G..............T.A.......A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  11   ----------------------------------------------------------------------------........------  18
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12264  271  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_269192

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           419     2e-119
IGHD4-17*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGGCCC	CTACGGTGACTAC	CCGTCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGCCCCTACGGTGACTACCCGTCATACTACTTTGACTAC	AREGPYGDYPSYYFDY	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	72	3	0	96
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	111	3	0	97.4
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	282	14	0	95.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  R  A  S  G  G  T  F  N 
                    Query_12265  4    CAGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGGCTTCTGGAGGCACCTTCAAC  93
V  95.3% (282/296)  IGHV1-69*12  1    ..............G........G...........................................A....................G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  V  I  S  W  M  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  I  T  N  Y 
                    Query_12265  94   AGCTATGTTATCAGTTGGATGCGACAGGCCCCTGGACAAGGGCTCGAGTGGATGGGCGGGATCATCCCTATCTTTGGTATAACAAACTAC  183
V  95.3% (282/296)  IGHV1-69*12  91   .......C......C...G.........................T...........A......................C.G........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  A  E  S  T  S  T  A  Y  M  E  L  S  S  L  K  S  E  D 
                    Query_12265  184  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGCCGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAAATCTGAGGAC  273
V  95.3% (282/296)  IGHV1-69*12  181  .....................................A.........................................G..........  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  L  Y  Y  C  A  R  E  G  P  Y  G  D  Y  P  S  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T 
                    Query_12265  274  ACGGCCCTGTATTACTGTGCGAGAGAAGGCCCCTACGGTGACTACCCGTCATACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACC  363
V  95.3% (282/296)  IGHV1-69*12  271  ......G...................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (13/13)   IGHD4-17*01  4    --------------------------------.............---------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ----------------------------------------------------......................................  38

                                                
                                       V  S  S  
                    Query_12265  364  GTCTCCTCAG  373
J  100.0% (48/48)   IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_269193

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           344     6e-97
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_12266  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.4% (234/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  H  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_12266  91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCCACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.4% (234/248)  IGHV4-39*01  139  .....................T.................T........C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_12266  181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.4% (234/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_12266  271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_269190

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           399     3e-113
IGHD3-3*01                                                                                            23.8    0.012 
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	ACTCTCC	TTTTGGAGTGGT	GATCCCA	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACTCTCCTTTTGGAGTGGTGATCCCAAACTGGTTCGACCCC	ANSPFGVVIPNWFDP	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	271	16	0	94.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  Y  G  G  T  F  S  S  Y
                    Query_12267  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTATGGAGGCACCTTCAGCAGCTA  90
V  94.4% (271/287)  IGHV1-69*01  6    ..................G.................................................C.....................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  Y  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  R  A  H  Y  A  Q
                    Query_12267  91   TGCCTACAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATATTTGGTAGAGCACACTACGCACA  180
V  94.4% (271/287)  IGHV1-69*01  96   ...TAT..G.........................................................C.......C....A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  E  S  T  G  T  A  Y  M  D  L  S  G  L  V  S  E  D  T  A
                    Query_12267  181  GAGGTTCCAGGGCAGAGTCACGATAACCGCGGACGAATCCACGGGCACAGCCTACATGGACCTGAGCGGCCTGGTATCTGAGGACACGGC  270
V  94.4% (271/287)  IGHV1-69*01  186  ..A.....................T..................A................G......A.....AG...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  N  S  P  F  G  V  V  I  P  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12267  271  CGTGTATTACTGTGCGAACTCTCCTTTTGGAGTGGTGATCCCAAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  94.4% (271/287)  IGHV1-69*01  276  .................-------------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                           
D  100.0% (12/12)   IGHD3-3*01   11   ------------------------............------------------------------------------------------  22
J  100.0% (47/47)   IGHJ5*02     3    -------------------------------------------...............................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_269191

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         333     1e-93
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-22*01	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAC	TACTATGATAGTAGTGGTT	CGTACTCCGAATC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACTACTATGATAGTAGTGGTTCGTACTCCGAATCTGATGCTTTTGATATC	ARHYYDSSGSYSESDAFDI	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	16	8	0	66.7
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	251	38	0	86.9


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  G  G  V  V  Q  P  G  K  S  L  R  L  S  C  E  V  S  G  F  T  F  S  S  F
                    Query_12268    1    GCAGCTGGTGCAGTCTGGAGGAGGCGTGGTCCAGCCTGGGAAATCCCTGAGACTCTCCTGTGAAGTCTCTGGATTCACCTTCAGTTCTTT  90
V  86.9% (251/289)  IGHV3-30-3*01  6    ..........G.......G......................GG...................C..C...................AGC.A  95
                                          Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          G  F  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  S  F  D  G  D  N  *  L  Y  A  D
                    Query_12268    91   TGGTTTCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCTCTTATTTCTTTTGATGGAGACAACTGATTATACGCAGA  180
V  86.9% (251/289)  IGHV3-30-3*01  96   ..C.A.G............................................AG....A..A.A.......AG...TAA..AC........  185
                                          A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  V  K  G  R  F  T  V  S  R  G  N  S  K  N  S  L  Y  L  Q  L  N  S  L  A  A  D  D  T  A
                    Query_12268    181  CTCCGTGAAGGGGCGATTCACCGTCTCGAGAGGCAATTCCAAGAACTCGCTCTATCTACAACTGAACAGCCTTGCAGCTGACGACACGGC  270
V  86.9% (251/289)  IGHV3-30-3*01  186  ............C.........A....C....A.............A....G.....G...A..........GAG......G........  275
                                          S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                        ------------><-----------------------CDR3-IMGT----------------------->                    
                                          V  Y  Y  C  A  R  H  Y  Y  D  S  S  G  S  Y  S  E  S  D  A  F  D  I  W  G  Q  G  T  L  V
                    Query_12268    271  TGTCTATTACTGTGCGAGACACTACTATGATAGTAGTGGTTCGTACTCCGAATCTGATGCTTTTGATATCTGGGGCCAGGGGACACTAGT  360
V  86.9% (251/289)  IGHV3-30-3*01  276  ...G...............-----------------------------------------------------------------------  294
                                          V  Y  Y  C  A  R                                                                        
D  100.0% (19/19)   IGHD3-22*01    5    ----------------------...................-------------------------------------------------  23
J  93.8% (45/48)    IGHJ3*02       1    ------------------------------------------------------........................A......A.G..  36

                                                    
                                          T  V  S  S
                    Query_12268    361  CACCGTCTCTTC  372
J  93.8% (45/48)    IGHJ3*02       37   ............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_7160

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*14                                                                                           366     2e-103
IGHD7-27*01                                                                                           14.1    8.5   
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*14	IGHD7-27*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCATC	CTGGGGA	CC	TTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCATCCTGGGGACCTTACCACTATTACTACGGTTTGGACGTC	ARPSWGPYHYYYGLDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12269  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTTCGCCAGGCGCCAGGCAAGGGGCTGG  90
V  97.2% (241/248)  IGHV3-30*14  47   ................................................................C........T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  H  D  G  G  T  K  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12269  91   AGTGGGTGGCAGTTATATCACATGATGGAGGCACTAAATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  97.2% (241/248)  IGHV3-30*14  137  ....................T........A.T.A........A...............................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  S  W  G  P  Y  H  
                    Query_12269  181  AGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGACCATCCTGGGGACCTTACCACT  270
V  97.2% (241/248)  IGHV3-30*14  227  ....................................................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD7-27*01  5    -------------------------------------------------------------------------.......----------  11
J  95.1% (58/61)    IGHJ6*02     2    ----------------------------------------------------------------------------------....T...  9

                                      T------------------>                                 
                                      Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12269  271  ATTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  95.1% (58/61)    IGHJ6*02     10   .C.........A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_242611

Length=429
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           327     1e-91
IGHD6-13*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              79.5    5e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCCATCCCGAGGGGGA	AGCAGCAGCTGGTAC	CGAAAGGGGC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCCATCCCGAGGGGGAAGCAGCAGCTGGTACCGAAAGGGGCACTTCTACGCAATGGATGTC	ASPSRGGSSSWYRKGHFYAMDV	305	370	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	115	45	20	4	21	44.4
FR2-IMGT	116	166	51	46	5	0	90.2
CDR2-IMGT	167	190	24	16	8	0	66.7
FR3-IMGT	191	304	114	107	7	0	93.9
CDR3-IMGT (germline)	305	309	5	5	0	0	100
Total	N/A	N/A	309	261	27	21	84.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-----------------CD
                                        Q  L  V  Q  S  G  A  E  V  T  K  P  G  S  S  V  K  I  S  C  K  A  S  G  G  T  F  R  S  S
                    Query_12270  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGACGAAGCCTGGGTCCTCGGTGAAGATCTCCTGCAAGGCTTCTGGAGGCACCTTCAGGTCTTC  90
V  84.5% (261/309)  IGHV1-69*01  6    ..................G..........A......................G...............................C-----  90
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S      

                                      R1-IMGT-----------------><--------------------FR2-IMGT---------------------><-------CDR2-I
                                        G  Y  T  F  G  T  Y  A  M  T  R  V  R  Q  A  P  G  Q  G  L  K  W  I  G  G  I  I  A  I  A
                    Query_12270  91   TGGATACACCTTCGGAACTTATGCCATGACCCGGGTGCGACAGGCCCCTGGACAAGGGCTTAAGTGGATAGGAGGGATCATCGCCATCGC  180
V  84.5% (261/309)  IGHV1-69*01  91   ----------------.GC.....T..C.G.T.............................G.......G............C.T...TT  164
                                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F

                                      MGT------><----------------------------------------------------FR3-IMGT-------------------
                                        G  V  I  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  A  N  T  A  Y  L  E  V  S  S
                    Query_12270  181  TGGTGTAATAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCGGCGAATACAGCCTACTTGGAGGTGAGCAG  270
V  84.5% (261/309)  IGHV1-69*01  165  ....AC.GC...................................................CA...GC.........A.....C.......  254
                                        G  T  A  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S

                                      ---------------------------------><----------------------------CDR3-IMGT------------------
                                        L  R  S  E  D  T  A  V  Y  Y  C  A  S  P  S  R  G  G  S  S  S  W  Y  R  K  G  H  F  Y  A
                    Query_12270  271  CCTGAGATCTGAGGACACGGCCGTCTATTACTGTGCGAGCCCATCCCGAGGGGGAAGCAGCAGCTGGTACCGAAAGGGGCACTTCTACGC  360
V  84.5% (261/309)  IGHV1-69*01  255  ........................G..............---------------------------------------------------  293
                                        L  R  S  E  D  T  A  V  Y  Y  C  A                                                      
D  100.0% (15/15)   IGHD6-13*01  7    -------------------------------------------------------...............--------------------  21
J  92.5% (49/53)    IGHJ6*02     10   --------------------------------------------------------------------------------...A.....G  19

                                      --------->                                 
                                        M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12270  361  AATGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  403
J  92.5% (49/53)    IGHJ6*02     20   T.....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 42181992


Query= Query_269198

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD2-15*01                                                                                           31.5    5e-05
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGAGTTC	TTGTACTGGTGGTAGGTGCTAC	ATGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGAGTTCTTGTACTGGTGGTAGGTGCTACATGTTCTACTACTACGCTGTGGACGTC	AGSSCTGGRCYMFYYYAVDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	234	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  V  S  I  S  T  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_12271  1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGTCTCCATCAGTACTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  95.1% (234/246)  IGHV4-39*01  49   ...................C...........G.........C.G..G..........................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  S  I  Y  H  S  G  S  A  F  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  T  S 
                    Query_12271  91   CTGGAGTGGATGGGGAGTATCTATCATAGTGGGAGCGCCTTCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  95.1% (234/246)  IGHV4-39*01  139  ...........T............T...........A...A................A................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  C  T  G  G  R 
                    Query_12271  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGGGGAGTTCTTGTACTGGTGGTAGG  270
V  95.1% (234/246)  IGHV4-39*01  229  ..................................................................------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.9% (20/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G.........C  22

                                      DR3-IMGT------------------------>                                 
                                       C  Y  M  F  Y  Y  Y  A  V  D  V  W  G  Q  G  T  T  I  T  V  S  S 
                    Query_12271  271  TGCTACATGTTCTACTACTACGCTGTGGACGTCTGGGGCCAAGGGACCACGATCACCGTCTCCTCA  336
D  90.9% (20/22)    IGHD2-15*01  23   ......------------------------------------------------------------  28
J  94.5% (52/55)    IGHJ6*02     8    -----------...........G.A..........................G..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_269199

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           363     1e-102
IGHD3-9*01                                                                                            29.5    2e-04 
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTCGGGATG	GATATTTTGACTGGT	GTCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTCGGGATGGATATTTTGACTGGTGTCTTCTACTACTACTTCGATCTC	ARVGMDILTGVFYYYFDL	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	113	1	0	99.1
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	244	238	6	0	97.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  H  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12272  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCCACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.5% (238/244)  IGHV3-53*01  47   ...............................................A..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  A  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_12272  91   AGTGGGTCTCGGTCATTTATGCCGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  97.5% (238/244)  IGHV3-53*01  137  ..........A..T......AG....................................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------------CDR3-IMG
                                      N  T  L  Y  F  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  M  D  I  L  T  G  
                    Query_12272  181  ACACGCTGTATTTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGGGTCGGGATGGATATTTTGACTGGTG  270
V  97.5% (238/244)  IGHV3-53*01  227  ...........C....................................................--------------------------  290
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  100.0% (15/15)   IGHD3-9*01   8    --------------------------------------------------------------------------...............-  22

                                      T--------------------->                                  
                                      V  F  Y  Y  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_12272  271  TCTTCTACTACTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  327
J  96.2% (51/53)    IGHJ2*01     1    ----.....GG..............................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_59932

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           341     5e-96
IGHD3-10*01                                                                                           21.8    0.041
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGGTTCGAGCAGTTATT	CCCTCGCGCG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTTCGAGCAGTTATTCCCTCGCGCGCTACGGTATGGACGTC	ARDGSSSYSLARYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12273  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACTTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-48*03  47   ....................G................C....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  G  S  G  R  T  I  Y  Y  A  D  S  V  K  G  R  F  T  L  S  R  D  N  T  
                    Query_12273  91   AGTGGGTTTCATACATTAGTGGCAGTGGAAGAACCATTTACTACGCAGACTCTGTGAAGGGCCGATTCACCTTGTCCAGAGACAACACCA  180
V  93.6% (234/250)  IGHV3-48*03  137  ....................A.T.....T..T.....A.................................A.C............G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  T  A  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  S  S  Y  S  
                    Query_12273  181  AGACCGCTCTGCATCTACAAATGAACAGCCTGAGAGCCGAAGACACGGCTGTTTATTACTGTGCGAGAGATGGTTCGAGCAGTTATTCCC  270
V  93.6% (234/250)  IGHV3-48*03  227  ...A.T.A...T....G.......................G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.2% (15/17)    IGHD3-10*01  10   ----------------------------------------------------------------------.......G.G.......---  26

                                      GT-------------------->                                 
                                      L  A  R  Y  G  M  D  V  W  G  Q  G  A  T  V  I  V  S  S 
                    Query_12273  271  TCGCGCGCTACGGTATGGACGTCTGGGGCCAAGGGGCCACGGTCATCGTCTCCTCA  326
J  95.9% (47/49)    IGHJ6*02     14   -------............................A.........C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_32884

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           422     2e-120
IGHD3-22*01                                                                                           33.4    2e-05 
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TC	ACTATGAAAGTAGTGATTATTAC	ACAGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCACTATGAAAGTAGTGATTATTACACAGATGATGCTTTTAATATC	ASHYESSDYYTDDAFNI	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	279	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  T  S  G  Y  S  F  T  S  Y
                    Query_12274  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGCTTTACCAGCTA  90
V  96.9% (279/288)  IGHV5-51*03  6    ................................................................GG........................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  L  I  Y  P  S  D  S  D  T  T  Y  S  P
                    Query_12274  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGCCTCATCTATCCCAGTGACTCTGATACCACATACAGCCC  180
V  96.9% (279/288)  IGHV5-51*03  96   ........G..........................................GA..........TG...............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12274  181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (279/288)  IGHV5-51*03  186  ........A.................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  S  H  Y  E  S  S  D  Y  Y  T  D  D  A  F  N  I  W  G  Q  G  T  M  V  T  V
                    Query_12274  271  CATGTATTACTGTGCGAGTCACTATGAAAGTAGTGATTATTACACAGATGATGCTTTTAATATCTGGGGCCAAGGGACAATGGTCACCGT  360
V  96.9% (279/288)  IGHV5-51*03  276  ..................------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  91.3% (21/23)    IGHD3-22*01  6    --------------------.......T.......G.......-----------------------------------------------  28
J  98.0% (49/50)    IGHJ3*02     1    ------------------------------------------------..........G...............................  42

                                              
                                        S  S  
                    Query_12274  361  CTCTTCAG  368
J  98.0% (49/50)    IGHJ3*02     43   ........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_221629

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           360     1e-101
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGGTCC	ATTACTATGATAGTA	CTTCTTACTACGGGAGTCGGTTCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGGTCCATTACTATGATAGTACTTCTTACTACGGGAGTCGGTTCCACTTTGACTAC	ARVVHYYDSTSYYGSRFHFDY	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G 
                    Query_12275  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGA  90
V  96.4% (239/248)  IGHV4-61*01  49   .........................................C........................A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_12275  91   CTGGAGTGGATTGGGTACATCTATTACAGAGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTGGACACGTCC  180
V  96.4% (239/248)  IGHV4-61*01  139  .................T...........T....G.......................................A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  V  H  Y  Y  D  S 
                    Query_12275  181  AAGAACCAGTTCTCCCTGCAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGGTGGTCCATTACTATGATAGT  270
V  96.4% (239/248)  IGHV4-61*01  229  ..................A..C..............................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (15/15)   IGHD3-22*01  3    ----------------------------------------------------------------------------..............  16

                                      CDR3-IMGT-------------------------->                                  
                                       T  S  Y  Y  G  S  R  F  H  F  D  Y  W  G  Q  G  P  L  V  T  V  S  S  
                    Query_12275  271  ACTTCTTACTACGGGAGTCGGTTCCACTTTGACTACTGGGGCCAGGGACCCCTGGTCACCGTCTCCTCAG  340
D  100.0% (15/15)   IGHD3-22*01  17   .---------------------------------------------------------------------  17
J  97.8% (44/45)    IGHJ4*02     4    -------------------------.......................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_32881

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD5-18*01                                                                                           18.0    0.60 
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGGCCCC	ARDPTGSGYNFGSNWFGP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_12276  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  90.6% (221/244)  IGHV4-59*01  50   .....TCC...A....C.............G........G.AG..A......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S  
                    Query_12276  94   GGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGCC  183
V  90.6% (221/244)  IGHV4-59*01  140  .......G......T..........G.GC.............................A.T......A...................A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F  
                    Query_12276  184  AGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTTG  273
V  90.6% (221/244)  IGHV4-59*01  230  ............A.........................A.......G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------------------------.......C.G..A..  15

                                      ------------------->                                  
                                      G  S  N  W  F  G  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_12276  274  GTTCTAACTGGTTCGGCCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  327
D  83.3% (15/18)    IGHD5-18*01  16   ...---------------------------------------------------  18
J  95.9% (47/49)    IGHJ5*02     3    -----..........A................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_32880

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           347     7e-98
IGHD3-22*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGGCAAAATAGTT	TGATAGT	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGGCAAAATAGTTTGATAGTCTTTGACTCT	ARGGQNSLIVFDS	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	27	25	24	1	0	96
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <-------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT------
                                        L  S  L  T  C  A  V  S  G  A  S  I  N  S  G  G  S  Y  W  T  W  I  R  Q  H  P  G  K  G  L
                    Query_12277  3    CCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAATAGTGGTGGTTCCTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGGCCT  92
V  94.8% (235/248)  IGHV4-31*03  51   ................A............G........GC..........A........G..............................  140
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  L

                                      ---------------><-----CDR2-IMGT-----><----------------------------------------------------
                                        E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  S  X  S  I  D  T  S  K
                    Query_12277  93   GGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTTTCCANATCAATAGACACGTCTAA  182
V  94.8% (235/248)  IGHV4-31*03  141  ........................................................A..........A...T....G.............  230
                                        E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K

                                      FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT-----
                                        N  Q  F  S  L  D  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  Q  N  S  L  I  V
                    Query_12277  183  GAACCAGTTCTCCCTGGACCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTATTGTGCGAGAGGAGGGCAAAATAGTTTGATAGT  272
V  94.8% (235/248)  IGHV4-31*03  231  ................A.G......................................C..........----------------------  298
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                        
D  100.0% (7/7)     IGHD3-22*01  10   -----------------------------------------------------------------------------------.......  16

                                      --------->                                  
                                        F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_12277  273  CTTTGACTCTTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  316
J  93.2% (41/44)    IGHJ4*02     5    ........AC............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_221626

Length=307
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           291     5e-81
IGHD1-1*01                                                                                            10.3    107  
IGHJ1*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TG	ACGAC	CTAA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGACGACCTAAAC	AKDDDLN	230	250	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	47	4	0	92.2
CDR2-IMGT	92	115	24	21	3	0	87.5
FR3-IMGT	116	229	114	107	7	0	93.9
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	205	19	0	91.5


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I  S  G  S 
                    Query_12278  14   TCTGGCTTCACCTTCAGTGACTATGCCATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAACCATTAGTGGTAGT  103
V  91.5% (205/224)  IGHV3-23*01  73   .....A........T..CAG..........AG...........................................G.T............  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  V  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  S  T  L  Y  L  Q  M  N 
                    Query_12278  104  GGAGTTACCACATACTATGCAGACTCCGTAAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAGCACGCTGTACCTGCAAATGAAC  193
V  91.5% (205/224)  IGHV3-23*01  163  ..T.G..G.........C...........G.....................................A.........T............  252
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><-----CDR3-IMGT----->                                 
                                       S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  D  D  L  N  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_12278  194  AGCCTGAGAGCCGACGACACGGCCGTTTATTACTGCGCGAAAGATGACGACCTAAACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCA  283
V  91.5% (205/224)  IGHV3-23*01  253  ..............G...........A........T........----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  100.0% (5/5)     IGHD1-1*01   13   ----------------------------------------------.....---------------------------------------  17
J  100.0% (36/36)   IGHJ1*01     17   -------------------------------------------------------...................................  51

                                       
                                       
                    Query_12278  284  G  284
J  100.0% (36/36)   IGHJ1*01     52   .  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 29565480


Query= Query_221620

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           244     7e-67
IGHD3-16*01                                                                                           14.1    8.8  
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGGAGGGGGCTTCGGGACAGA	ATTATGA	CGGACGACGGGGGACTCTGTC	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGGAGGGGGCTTCGGGACAGAATTATGACGGACGACGGGGGACTCTGTCCGTC	ARLEGASGQNYDGRRGTLSV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	87	27	0	76.3
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	199	43	0	82.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  S  F  Y  W  G  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_12279  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCAATCAGTAGTTTTTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGCCTGGAG  90
V  82.2% (199/242)  IGHV4-59*08  49   ...............................G...C..........AC......A..........G...C.............A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  A  V  S  Y  R  G  S  T  S  S  N  P  S  L  R  G  R  V  T  L  F  V  G  P  S  N  N 
                    Query_12279  91   TGGGTTGGGGCCGTCTCTTATAGAGGGAGCACCTCCTCCAATCCGTCCCTCAGGGGTCGAGTCACCTTATTTGTGGGCCCGTCCAATAAT  180
V  82.2% (199/242)  IGHV4-59*08  139  ...A.....TATA...A...C..T.........AA..A...C..C.......A.A...........A...CA..A.A.A.......G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  V  S  L  E  V  R  S  V  T  A  A  D  S  A  I  Y  Y  C  A  R  L  E  G  A  S  G  Q  N  Y 
                    Query_12279  181  CAAGTTTCCCTGGAAGTGAGGTCTGTGACCGCCGCAGACAGCGCCATTTACTACTGTGCGAGGCTGGAGGGGGCTTCGGGACAGAATTAT  270
V  82.2% (199/242)  IGHV4-59*08  229  ..GT.C......A.GC....C...................CG...G.G..T...........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------------------------.....  7

                                      GT------------------------>                                 
                                       D  G  R  R  G  T  L  S  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12279  271  GACGGACGACGGGGGACTCTGTCCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
D  100.0% (7/7)     IGHD3-16*01  8    ..----------------------------------------------------------  9
J  100.0% (37/37)   IGHJ6*02     26   -----------------------.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_221621

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD4-4*01                                                                                            19.9    0.15 
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-4*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	N/A	CTACAGTACCTAC	GCGCGAAGCTCCGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACTACAGTACCTACGCGCGAAGCTCCGGTTTTGATATC	ARDYSTYARSSGFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  A  Y  N  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12280  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTGCCTATAACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ....................................C.......AG.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  N  D  I  S  S  H  I  Y  Y  A  E  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12280  91   AGTGGGTCTCATACATTAATGATATTAGTAGTCACATATACTACGCAGAGTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ............C.....G.AG..G.......T................C...G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  F  C  A  R  D  Y  S  T  Y  A  R  
                    Query_12280  181  AGAACTCGCTGTATCTGCAAATGAACAGCCTGACAGCCGAGGACACGGCTGTTTATTTCTGTGCGAGGGACTACAGTACCTACGCGCGAA  270
V  93.2% (233/250)  IGHV3-21*01  227  .......A.........................G..................G....A.........A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD4-4*01   4    ----------------------------------------------------------------------........A....-------  16

                                      ---------------->                                  
                                      S  S  G  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12280  271  GCTCCGGTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  100.0% (44/44)   IGHJ3*02     7    -------............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_32889

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           408     4e-116
IGHD3-3*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCAACCTGACTC	TTTTGGAGTGGTTAT	CTC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGGCAACCTGACTCTTTTGGAGTGGTTATCTCCTTTGACAAC	TRGQPDSFGVVISFDN	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  N  F  S  G  Y 
                    Query_12281  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACAACTTTAGCGGCTAT  91
V  95.2% (275/289)  IGHV1-18*01  7    ............................................................................C.....C.A.....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  T  G  Y  N  G  K  R  N  Y  A  Q 
                    Query_12281  92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCACCGGTTACAATGGTAAAAGGAACTATGCACAG  181
V  95.2% (275/289)  IGHV1-18*01  97   ..................................................A.......G..C............C.CA............  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  D  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_12281  182  AATCTCCAGGACAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGAAGCCTGAGATCTGACGACACGGCT  271
V  95.2% (275/289)  IGHV1-18*01  187  ..G.......G......................................................G.......................C  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  T  R  G  Q  P  D  S  F  G  V  V  I  S  F  D  N  W  G  Q  G  T  L  V  T  V  S 
                    Query_12281  272  GTGTATTACTGTACGAGAGGGCAACCTGACTCTTTTGGAGTGGTTATCTCCTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  361
V  95.2% (275/289)  IGHV1-18*01  277  ............G......-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (15/15)   IGHD3-3*01   11   --------------------------------...............-------------------------------------------  25
J  97.7% (43/44)    IGHJ4*02     5    --------------------------------------------------.......T................................  44

                                          
                                       S  
                    Query_12281  362  TCAG  365
J  97.7% (43/44)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_221623

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_12282  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_12282  91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y 
                    Query_12282  181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTAC  270
V  91.4% (223/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD2-2*01   8    ---------------------------------------------------------------------........T........----  24
J  88.5% (46/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_12282  271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  318
J  88.5% (46/52)    IGHJ6*02     15   ...GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_168882

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           344     6e-97
IGHD6-13*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGT	GGTATAGCAGCA	CCCTTAAA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGTGGTATAGCAGCACCCTTAAATACTTTGACTAC	ARVWYSSTLKYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  I  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  H 
                    Query_12283  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCATCATCAGGAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGCAC  90
V  94.0% (235/250)  IGHV4-31*03  49   ...............................G.TC......C....................C........................GG.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12283  91   CTGGAGTGGATTGGGTACATCTATTATAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCT  180
V  94.0% (235/250)  IGHV4-31*03  139  ..........................C.......G.............C......................C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  L  T  A  A  D  T  A  V  Y  F  C  A  R  V  W  Y  S  S  T  L 
                    Query_12283  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCCCTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGTGTGGTATAGCAGCACCCTT  270
V  94.0% (235/250)  IGHV4-31*03  229  .............................TG...........................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD6-13*01  2    -------------------------------------------------------------------------............-----  13

                                      -------------->                                
                                       K  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12283  271  AAATACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  317
J  100.0% (44/44)   IGHJ4*02     3    ---............................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_96418

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           349     3e-98
IGHD3-10*01                                                                                           12.2    36   
IGHJ4*03                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ4*03	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAACA	TGTCATGTA	TCGGGG	GGGTCGCTTGGA	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATGTCATGTATCGGGGGGGTCGCTTGGACTACTTTGACTCC	AKHVMYRGGRLDYFDS	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	257	34	0	88.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  P  L  R  I  S  C  K  G  S  G  N  T  F  T  T  S
                    Query_12284  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGCCTCTGAGGATTTCCTGTAAGGGGTCTGGAAACACTTTCACCACCTC  90
V  88.3% (257/291)  IGHV5-51*01  6    ..............................A........G...T......A...C...........T......T...GC..T....G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  L  P  E  K  G  L  E  W  M  G  I  V  F  P  D  D  S  D  T  I  Y  N  P
                    Query_12284  91   GTGGATCGCCTGGGTGCGCCAGCTGCCCGAGAAAGGCCTGGAGTGGATGGGCATCGTCTTTCCTGATGATTCAGACACCATATACAATCC  180
V  88.3% (257/291)  IGHV5-51*01  96   C.......G.............A......G.....................G...A...A.....G...C..T..T....G.....GC..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  L  I  T  I  S  A  D  K  S  L  K  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12284  181  GTCCTTCCAAGGCCTGATCACCATCTCGGCCGACAAGTCCCTCAAGACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  88.3% (257/291)  IGHV5-51*01  186  ..............A.G..........A............A...GC............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        I  Y  Y  C  A  K  H  V  M  Y  R  G  G  R  L  D  Y  F  D  S  W  G  Q  G  T  L  V  I  A  S
                    Query_12284  271  CATATATTACTGTGCGAAACATGTCATGTATCGGGGGGGTCGCTTGGACTACTTTGACTCCTGGGGCCAAGGGACCCTGGTCATCGCCTC  360
V  88.3% (257/291)  IGHV5-51*01  276  ...G.............G...---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-10*01  14   ------------------------------......------------------------------------------------------  19
J  91.5% (43/47)    IGHJ4*03     2    ------------------------------------------------...........A.......................C..T...  43

                                           
                                        S  
                    Query_12284  361  TTCAG  365
J  91.5% (43/47)    IGHJ4*03     44   C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_293620

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           367     6e-104
IGHD6-6*01                                                                                            19.9    0.17  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTAG	GAACCTGGTCTTC	GAGTATAGAGGCTCGT	GGGACCAGATAAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGGAACCTGGTCTTCGAGTATAGAGGCTCGTGGGACCAGATAAAATACGGAATGGACGTC	TRNLVFEYRGSWDQIKYGMDV	249	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	244	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  D  D  Y  T  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12285  1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGATGATTATACTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (244/253)  IGHV3-49*04  47   ..........................................G.......G.......................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  L  I  E  S  K  A  Y  G  G  T  T  K  Y  A  A  S  V  K  A  R  F  T  I  S  R  D  
                    Query_12285  91   AGTGGGTAGGTCTCATTGAAAGCAAAGCTTATGGTGGGACCACAAAATACGCCGCGTCTGTGAAAGCCAGATTCACCATCTCAAGAGATG  180
V  96.4% (244/253)  IGHV3-49*04  137  ...........T.....AG.....................A...G.....................G.......................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  R  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  N  L  V  F  E  
                    Query_12285  181  ATTCCAGAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGGAACCTGGTCTTCGAGT  270
V  96.4% (244/253)  IGHV3-49*04  227  ......A..................................................................-----------------  299
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  87.5% (14/16)    IGHD6-6*01   1    --------------------------------------------------------------------------------------....  4

                                      -----CDR3-IMGT-------------------------->                                 
                                      Y  R  G  S  W  D  Q  I  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12285  271  ATAGAGGCTCGTGGGACCAGATAAAATACGGAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
D  87.5% (14/16)    IGHD6-6*01   5    ....CA......--------------------------------------------------------------  16
J  97.9% (47/48)    IGHJ6*02     15   --------------------------.....T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_96411

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHD3-16*01                                                                                           10.3    116  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGACGAGGGGCA	GGGGG	CGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGACGAGGGGCAGGGGGCGGTTGACTCT	ARVDEGQGAVDS	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  K  V  S  G  G  S  I  T  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12286  1    ACCCTGTCCCTCACCTGCAAGGTCTCTGGGGGCTCCATCACGACTTACTACTGGAGTTGGATCCGACAGCCCCCAGGGAAGGGACTGGAG  90
V  92.2% (225/244)  IGHV4-59*01  49   ...................CT........T..........GT.G............C........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  V  N  R  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_12286  91   TGGATTGGGTATATCTATTACACTGGCAGTGTCAACCGCAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*01  139  ......................G...G..CAC....TA..............................A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  D  E  G  Q  G  A  V  D 
                    Query_12286  181  CAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTTGACGAGGGGCAGGGGGCGGTTGAC  270
V  92.2% (225/244)  IGHV4-59*01  229  ...............C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   -----------------------------------------------------------------------------.....--------  22
J  92.9% (39/42)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12286  271  TCTTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  307
J  92.9% (39/42)    IGHJ4*02     12   .AC.............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_96416

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           352     3e-99
IGHD6-6*01                                                                                            10.3    121  
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTCCGAAAC	CGTCC	GG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTCTCCGAAACCGTCCGGACTACTACTACCCTATGGACGTC	TRGLRNRPDYYYPMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_12287  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGACCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-11*01  47   .........................................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  N  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_12287  91   AGTGGGTTTCATATATCAGTAGTAGTGGTAATTACATCTACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAGCGCCA  180
V  95.2% (237/249)  IGHV3-11*01  137  .............C..T.............G.AC...A..............................................A.....  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  F  L  Q  M  I  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  G  L  R  N  R  P  D  
                    Query_12287  181  AGAACTCACTGTTTCTGCAAATGATCAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTACGAGAGGTCTCCGAAACCGTCCGGACT  270
V  95.2% (237/249)  IGHV3-11*01  227  ............A...........A...........................G.........G......---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD6-6*01   14   --------------------------------------------------------------------------------.....-----  18
J  96.4% (54/56)    IGHJ6*02     7    ---------------------------------------------------------------------------------------...  9

                                      T------------------>                                 
                                      Y  Y  Y  P  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12287  271  ACTACTACCCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.4% (54/56)    IGHJ6*02     10   ........GG...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_96417

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     3e-93
IGHD3-16*01                                                                                           12.2    32   
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GCCCAACAGGCA	TGGGGG	TCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGCCCAACAGGCATGGGGGTCCACTACGGCATGGACGTC	ARRPTGMGVHYGMDV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  I  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12288  1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*08  49   .....................G....................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  G  S  G  T  T  D  Y  N  A  S  F  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12288  91   TGGATTGGGTATATCTTCGGCAGTGGGACTACCGATTACAACGCCTCCTTTAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-59*08  139  ................ATTA........GC...A.C......C.....C.C.......................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  L  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  P  T  G  M  G  V  H  Y 
                    Query_12288  181  CAGTTGTCCCTGAGGCTGAACTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACGCCCAACAGGCATGGGGGTCCACTAC  270
V  93.4% (228/244)  IGHV4-59*08  229  .....C.......A.....G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------------......--------  22
J  96.0% (48/50)    IGHJ6*02     13   -------------------------------------------------------------------------------------.....  17

                                      ----------->                                 
                                       G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12288  271  GGCATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTCCTCA  315
J  96.0% (48/50)    IGHJ6*02     18   ..T.................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_96415

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD2-15*01                                                                                           21.8    0.041
IGHJ3*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGG	GGATATAGTAGTGG	CTGCTGCCACCGTTC	TTGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGGGATATAGTAGTGGCTGCTGCCACCGTTCTTGCTGTC	ARDQGDIVVAAATVLAV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  G  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_12289  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTGGTTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ......................................C...A...A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  F  Y  S  E  S  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  A  S  K  K 
                    Query_12289  91   TGGATTGGGCATATCTTTTACAGTGAGAGTACCAGCTATAACCCCTCCCTCAAGAGTCGAGTCACTATATCAGTAGACGCGTCCAAGAAG  180
V  93.5% (229/245)  IGHV4-59*01  139  .........T......A........G...C....A...C..........................C............A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  G  D  I  V  V  A  A 
                    Query_12289  181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATCAGGGGGATATAGTAGTGGCTGCT  270
V  93.5% (229/245)  IGHV4-59*01  229  ...................GC..........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD2-15*01  2    -----------------------------------------------------------------------......T.......-----  15

                                      ----------------->                                  
                                       A  T  V  L  A  V  W  G  Q  G  T  K  V  T  V  S  S  
                    Query_12289  271  GCCACCGTTCTTGCTGTCTGGGGCCAAGGGACAAAGGTCACCGTCTCTTCAG  322
J  95.2% (40/42)    IGHJ3*01     9    ----------...A....................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_323310

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           346     2e-97
IGHD2-15*01                                                                                           33.4    2e-05
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATGAAA	GATATTGTAGTGAAGGTAGTTGCTAC	CCTTCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTACCCTTCATACTTTGACTTC	ARYERYCSEGSCYPSYFDF	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	98	16	0	86
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	255	34	0	88.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  K  I  S  C  K  T  S  G  Y  S  F  S  N  Y
                    Query_12290  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAAAAGCCCGGGCAGTCTCTGAAGATCTCCTGTAAGACTTCTGGATACAGTTTCAGCAACTA  90
V  88.2% (255/289)  IGHV5-51*01  6    .....................A..................G.......................GG............C..T.C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  S  G  E  G  L  E  W  M  G  I  I  Y  A  G  D  S  D  I  T  Y  S  P
                    Query_12290  91   TTGGATCGGCTGGGTGCGCCAGATGTCCGGTGAAGGCCTGGAGTGGATGGGAATCATCTATGCTGGCGACTCTGACATTACATATAGTCC  180
V  88.2% (255/289)  IGHV5-51*01  96   C........................C....GA...................G.........C....T........T.CC.G...C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  R  V  T  I  S  V  D  K  A  I  D  T  A  Y  V  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12290  181  GTCCTTTGAGGGCCGGGTCACCATCTCAGTCGACAAGGCCATCGACACCGCCTACGTACAGTGGAGCAGTCTGAAGGCCTCGGACACCGC  270
V  88.2% (255/289)  IGHV5-51*01  186  ......CC.A....A..............C.......T.....AG..........C.G...........C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        T  Y  Y  C  A  R  Y  E  R  Y  C  S  E  G  S  C  Y  P  S  Y  F  D  F  W  G  Q  G  T  P  V
                    Query_12290  271  CACATATTACTGTGCGAGATATGAAAGATATTGTAGTGAAGGTAGTTGCTACCCTTCATACTTTGACTTCTGGGGCCAGGGAACCCCGGT  360
V  88.2% (255/289)  IGHV5-51*01  276  ..TG...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  88.5% (23/26)    IGHD2-15*01  3    --------------------------............GT.....C......--------------------------------------  28
J  95.7% (44/46)    IGHJ4*02     3    ----------------------------------------------------------..........A.................T...  34

                                                    
                                        T  V  S  S  
                    Query_12290  361  CACCGTCTCCTCAG  374
J  95.7% (44/46)    IGHJ4*02     35   ..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_61308

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           336     1e-94
IGHD3-10*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCGGACGAATA	ACTATGGTCCGGGGAG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCGGACGAATAACTATGGTCCGGGGAGCCCCTTTGACGAC	ARHRTNNYGPGSPFDD	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	233	18	0	92.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  S  T  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_12291  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCGGTAGTACTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  92.8% (233/251)  IGHV4-39*01  49   ..........................................A......G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  H  S  G  S  T  Q  Y  S  P  S  L  Q  S  R  V  T  I  F  V  D  T  S 
                    Query_12291  91   CTGGAGTGGATAGGCAGTATTTATCATAGTGGGAGCACCCAGTACAGTCCGTCCCTCCAGAGCCGAGTCACCATATTCGTGGACACGTCA  180
V  92.8% (233/251)  IGHV4-39*01  139  ...........T..G.....C...T..............T.C....AC.........A....T.............C...A........C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       N  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  H  R  T  N  N  Y  G 
                    Query_12291  181  AACAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACGCGGCTGTGTATTACTGTGCGAGACATCGGACGAATAACTATGGT  270
V  92.8% (233/251)  IGHV4-39*01  229  ..G..........................................A.........................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  93.8% (15/16)    IGHD3-10*01  6    ----------------------------------------------------------------------------------........  13

                                      GT------------------>                                  
                                       P  G  S  P  F  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12291  271  CCGGGGAGCCCCTTTGACGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  93.8% (15/16)    IGHD3-10*01  14   T.......-----------------------------------------------  21
J  97.7% (43/44)    IGHJ4*02     5    -----------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_61309

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD5-12*01                                                                                           16.1    2.3  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTGGTCCCGAAAA	ATATAGTG	AATATC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTGGTCCCGAAAAATATAGTGAATATCCTTTTGACATT	ARFGPEKYSEYPFDI	250	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	135	33	20	1	12	60.6
FR3-IMGT	136	249	114	106	8	0	93
CDR3-IMGT (germline)	250	255	6	6	0	0	100
Total	N/A	N/A	255	229	14	12	89.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  I  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12292  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCATCACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  89.8% (229/255)  IGHV4-59*01  49   ...............................G........GT.G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----------CDR2-IMGT-----------><--------------------------------------------
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  F  N  T  N  Y  N  P  S  L  K  S  R  V  A  I  S  L  D 
                    Query_12292  91   TGGATTGGCTATATTTATTACAGTGGGAGCACCAACTTCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCGCCATTTCACTAGAC  180
V  89.8% (229/255)  IGHV4-59*01  139  ........G.....C..............------------..................................A....A...G.....  216
                                       W  I  G  Y  I  Y  Y  S  G  S              T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-----------------CDR
                                       T  S  K  S  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  G  P  E  K 
                    Query_12292  181  ACGTCCAAGAGCCAGTTCTCCCTGAGACTGAGTTCGGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATTTGGTCCCGAAAAA  270
V  89.8% (229/255)  IGHV4-59*01  217  ..........A..............AG.....C..T.......................................---------------  291
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  100.0% (8/8)     IGHD5-12*01  5    -----------------------------------------------------------------------------------------.  5

                                      3-IMGT----------------->                                  
                                       Y  S  E  Y  P  F  D  I  W  G  Q  G  T  M  V  T  V  S  A  
                    Query_12292  271  TATAGTGAATATCCTTTTGACATTTGGGGCCAAGGGACAATGGTCACCGTCTCTGCAG  328
D  100.0% (8/8)     IGHD5-12*01  6    .......---------------------------------------------------  12
J  93.3% (42/45)    IGHJ3*02     6    -------------.......T..C..............................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_242614

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            357     1e-100
IGHD6-13*01                                                                                           21.8    0.040 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCGAGGG	GCAGCAGTTGGTAC	CATT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCGAGGGGCAGCAGTTGGTACCATTCTACGTTGACTCC	ARFEGQQLVPFYVDS	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	237	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12293  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGATCCATTAGTAGTAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  96.3% (237/246)  IGHV4-4*02   49   ................................C.....C..C................................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_12293  91   GAGTGGATTGGTGAAATCCATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCTAAG  180
V  96.3% (237/246)  IGHV4-4*02   139  ...........G......T...................................................................C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  E  G  Q  Q  L  V  P 
                    Query_12293  181  AACCACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGATTCGAGGGGCAGCAGTTGGTACCA  270
V  96.3% (237/246)  IGHV4-4*02   229  .....G...........G....G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  92.9% (13/14)    IGHD6-13*01  8    --------------------------------------------------------------------------.......C......--  21

                                      -------------->                                  
                                       F  Y  V  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12293  271  TTCTACGTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  95.7% (45/47)    IGHJ4*02     2    --....T......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_61304

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           322     2e-90
IGHD2-2*01                                                                                            29.5    2e-04
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCT	TTGTACTAGTACCAGTTGCTA	CTCCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCTTTGTACTAGTACCAGTTGCTACTCCTTCTACTCGTACGGTCTGGACGTC	ARELCTSTSCYSFYSYGLDV	230	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	21	3	0	87.5
FR3-IMGT	116	229	114	113	1	0	99.1
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	215	9	0	96


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  I  Y  S  T  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  S 
                    Query_12294  14   TCTGGATTCACCTTCAGTATATATAGTACGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCCATTAGTAGTAGT  103
V  96.0% (215/224)  IGHV3-21*01  73   ...................GC.....C.T..A..........................................................  162
                                       S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       S  T  Y  T  Y  Y  A  D  S  M  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 
                    Query_12294  104  AGTACTTATACATACTACGCAGACTCAATGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAAC  193
V  96.0% (215/224)  IGHV3-21*01  163  ....G...C.T................G..............................................................  252
                                       S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><-------------------------CDR3-IMGT-------------------
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  L  C  T  S  T  S  C  Y  S  F  Y  S  Y  G  L 
                    Query_12294  194  AGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGCTTTGTACTAGTACCAGTTGCTACTCCTTCTACTCGTACGGTCTG  283
V  96.0% (215/224)  IGHV3-21*01  253  ............................................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  90.5% (19/21)    IGHD2-2*01   7    -----------------------------------------------.....G.........C.....----------------------  27
J  94.5% (52/55)    IGHJ6*02     8    --------------------------------------------------------------------------.....AC......A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12294  284  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  322
J  94.5% (52/55)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_61305

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*04                                                                                           296     2e-82
IGHD2-21*01                                                                                           10.3    125  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*04	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATAAAGACCCCGGAGGGCGC	CTATT	TCTCG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATAAAGACCCCGGAGGGCGCCTATTTCTCGTACTACGGTATGGACGTC	ARIKTPEGAYFSYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	218	29	0	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  I  A  S  G  F  T  F  S  D  F  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12295  1    GGTCCCTGAGACTCTCCTGTATAGCCTCTGGATTCACCTTCAGTGATTTTACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGC  90
V  88.3% (218/247)  IGHV3-21*04  47   ....................GC......................AGC.A..G.................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  S  S  G  T  Y  T  Y  Y  A  D  S  L  Q  G  R  F  T  I  A  R  D  N  A  
                    Query_12295  91   AGTGGGTGTCATCCATTAGTAGTAGTGGGACTTACACATACTACGCAGACTCACTTCAGGGCCGATTCACCATCGCCAGAGACAACGCCA  180
V  88.3% (218/247)  IGHV3-21*04  137  .......C..................A.T.G.....T................G.GA.................T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  R  S  L  Y  L  Q  V  N  S  L  R  T  E  D  T  G  I  Y  Y  C  A  R  I  K  T  P  E  G  A  
                    Query_12295  181  AGAGGTCTCTGTATCTCCAAGTGAACAGCCTGAGAACCGAGGACACCGGCATATATTATTGTGCGAGGATAAAGACCCCGGAGGGCGCCT  270
V  88.3% (218/247)  IGHV3-21*04  227  ...AC..A........G...A..............G..........G.C.G.G.....C........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  22   ----------------------------------------------------------------------------------------..  23

                                      IMGT--------------------->                              
                                      Y  F  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_12295  271  ATTTCTCGTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  326
D  100.0% (5/5)     IGHD2-21*01  24   ...-----------------------------------------------------  26
J  100.0% (48/48)   IGHJ6*02     12   --------................................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_61306

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCACA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACAGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	268	18	0	93.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_12296  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  93.7% (268/286)  IGHV5-51*01  6    ..............................A...................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  Q  G  L  E  L  M  G  L  I  Y  P  G  D  S  D  T  W  Y  S  P
                    Query_12296  91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGGCAAGGCCTGGAGTTGATGGGGCTCATCTATCCTGGTGACTCTGATACCTGGTACAGTCC  180
V  93.7% (268/286)  IGHV5-51*01  96   ......................A........A............G.......A..........................A.A.....C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  T  S  A  Y  L  Q  W  T  T  L  K  A  S  D  T  A
                    Query_12296  181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCACCTCCGCCTACCTGCAGTGGACCACCCTGAAGGCCTCGGACACCGC  270
V  93.7% (268/286)  IGHV5-51*01  186  ....................C...................A...G.A..................G..G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12296  271  CATTTACTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACAGACTACTGGGGCCAGGGGACCCTGGTCACCGTCTCCTCAG  353
V  93.7% (268/286)  IGHV5-51*01  276  ...G..T.........-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------.................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_168885

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            417     6e-119
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	112	2	0	98.2
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	273	6	0	97.8


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_12297  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  97.8% (273/279)  IGHV6-1*01   26   ...........................................................G......G....AG.................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_12297  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  97.8% (273/279)  IGHV6-1*01   116  ..........................................................................................  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  D  P  D  A  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_12297  181  GTCGAATAACCATCGACCCAGACGCATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  97.8% (273/279)  IGHV6-1*01   206  ..............A........A..................................................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------CDR3-IMGT--------->                                  
                                      C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12297  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  97.8% (273/279)  IGHV6-1*01   296  .........---------------------------------------------------------  304
                                      C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02     4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_61302

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           424     8e-121
IGHD2-15*01                                                                                           10.3    132   
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AT	TATTG	AGTGATCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAATTATTGAGTGATCGTGCTTTTGATATC	ARQLLSDRAFDI	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	281	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  D  S  G  Y  S  F  T  S  Y
                    Query_12298  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGATTCTGGATACAGCTTTACCAGCTA  90
V  96.6% (281/291)  IGHV5-51*01  6    ..............................A..............................A...G........................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  I  I  F  P  A  D  S  D  A  R  Y  S  P
                    Query_12298  91   CTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGTTGGGGATCATCTTTCCTGCTGACTCTGATGCCAGATACAGCCC  180
V  96.6% (281/291)  IGHV5-51*01  96   .........C....................................A............A.....G..........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12298  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.6% (281/291)  IGHV5-51*01  186  .............................C.............A..............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  Q  L  L  S  D  R  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12298  271  CATGTATTACTGTGCGAGACAATTATTGAGTGATCGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  353
V  96.6% (281/291)  IGHV5-51*01  276  .....................--------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (5/5)     IGHD2-15*01  5    -----------------------.....-------------------------------------------------------  9
J  100.0% (47/47)   IGHJ3*02     4    ------------------------------------...............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_61303

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_12299  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.8% (277/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_12299  91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_12299  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12299  271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.8% (277/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_12299  361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_288603

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            280     1e-77
IGHD3-3*02                                                                                            10.3    125  
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-3*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GC	ATTAG	GGCGCGGTTGAAGACTCGCAGTTCATTT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGCATTAGGGCGCGGTTGAAGACTCGCAGTTCATTTTGGTTCGACCCC	AKGIRARLKTRSSFWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	94	20	0	82.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	214	35	0	85.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  G  P  G  K  G  L  
                    Query_12300  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGACGACTATGCCATGCACTGGGTCCGCCAAGGTCCAGGGAAGGGCCTGG  90
V  85.9% (214/249)  IGHV3-9*01   47   ...........................................T..T....................G....C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  T  G  N  A  T  T  I  D  Y  S  N  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12300  91   AGTGGGTCTCAGGTATTACTGGCAATGCAACGACTATAGACTATTCGAATTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCC  180
V  85.9% (214/249)  IGHV3-9*01   137  ..................G.T.G...AGTGGT.GC....G....G..G.C..T................................C...A  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      Q  S  V  V  Y  L  Q  M  N  S  L  R  L  D  D  T  G  V  Y  Y  C  A  K  G  I  R  A  R  L  K  
                    Query_12300  181  AGAGTGTCGTGTATCTGCAAATGAACAGTCTGAGACTTGACGACACGGGCGTCTACTATTGTGCAAAAGGCATTAGGGCGCGGTTGAAGA  270
V  85.9% (214/249)  IGHV3-9*01   227  ...ACTC.C..........................GC...G.......C.T.G..T..C..........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD3-3*02   3    -----------------------------------------------------------------------.....--------------  7

                                      IMGT--------------------->                                  
                                      T  R  S  S  F  W  F  D  P  R  G  Q  G  T  L  V  T  V  S  S  
                    Query_12300  271  CTCGCAGTTCATTTTGGTTCGACCCCAGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  330
J  95.7% (44/46)    IGHJ5*02     6    --------------............T.............C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_288602

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-16*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCT	TTACGTTTGGGGGAGCTATG	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTTTACGTTTGGGGGAGCTATGGACTACTTTGACTAC	ARGLFTFGGAMDYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  A  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_12301  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCGCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ...............................G.T..........................................A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  S  T  Y  S  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12301  91   CTGGAGTGGATTGGGTACATCTATTACCGTGGGAGCACGTACTCCAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ...........................A..........C....A..............................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  L  S  V  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  F  T  F  G  G 
                    Query_12301  181  AAGAACCAGTTGTCCGTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTATTGTGCGAGAGGCCTCTTTACGTTTGGGGGA  270
V  96.4% (241/250)  IGHV4-31*03  229  ...........C...C...........................................C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-16*01  10   ----------------------------------------------------------------------------..............  23

                                      GT------------------>                                  
                                       A  M  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12301  271  GCTATGGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  95.0% (19/20)    IGHD3-16*01  24   .T....-------------------------------------------------  29
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_288601

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            353     1e-99
IGHD3-10*01                                                                                           41.1    7e-08
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAAAAAGG	TTACTATGGTTCGGGGAGTTA	CCCCCTCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAAAAAGGTTACTATGGTTCGGGGAGTTACCCCCTCCACTACTTCTATCACGCTCTGGGCGTC	ARDQKGYYGSGSYPLHYFYHALGV	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  I  T  N  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12302  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCATTACTAACTTTTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-7*01   47   ......................................T...G..G..A.........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  N  G  N  E  R  Y  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_12302  91   AGTGGGTGGCCAACATAAAGGAAAATGGAAATGAGAGATACTATGTGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-7*01   137  ....................C..G......G.....A....................A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Q  K  G  Y  Y  G  
                    Query_12302  181  AGAACTCACTGTATCTGCAATTGAACAGCCTGAGAGCCGAGGACACCGCTGTGTATTACTGTGCGAGAGATCAAAAAGGTTACTATGGTT  270
V  95.2% (238/250)  IGHV3-7*01   227  ....................A.........................G.......................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (21/21)   IGHD3-10*01  4    -------------------------------------------------------------------------------...........  14

                                      ----CDR3-IMGT------------------------------>                                 
                                      S  G  S  Y  P  L  H  Y  F  Y  H  A  L  G  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12302  271  CGGGGAGTTACCCCCTCCACTACTTCTATCACGCTCTGGGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  347
D  100.0% (21/21)   IGHD3-10*01  15   ..........-------------------------------------------------------------------  24
J  89.8% (53/59)    IGHJ6*02     4    ------------------......A...CT...G.A...A.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_288600

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            338     5e-95
IGHD5-12*01                                                                                           18.0    0.58 
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	ACGGGTAGAGA	TGGCTACAATTA	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAACGGGTAGAGATGGCTACAATTATGATGCTTTGGATATG	AGTGRDGYNYDALDM	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  S  D  Y  W  M  T  W  V  R  Q  A  P  G  K  G  P  
                    Query_12303  1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCACCTTCAGTGACTATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  93.5% (232/248)  IGHV3-7*03   47   .......................G................T...AG...........G.............................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  H  D  G  R  E  K  N  Y  V  D  A  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12303  91   AGTGGGTGGCCAACATTAAACATGATGGACGTGAGAAAAACTATGTCGACGCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.5% (232/248)  IGHV3-7*03   137  ................A..G..A......A........T.......G...T.......................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  G  T  G  R  D  G  Y  N  
                    Query_12303  181  AGAACTCACTGTACCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTGTATTACTGTGCGGGAACGGGTAGAGATGGCTACAATT  270
V  93.5% (232/248)  IGHV3-7*03   227  .............T......................C............................A..----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD5-12*01  11   -------------------------------------------------------------------------------.......G...  21

                                      ---------------->                                  
                                      Y  D  A  L  D  M  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12303  271  ATGATGCTTTGGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCCTCAG  321
D  91.7% (11/12)    IGHD5-12*01  22   .--------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    -.........T.....C.............................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_288606

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            357     1e-100
IGHD6-19*01                                                                                           18.0    0.65  
IGHJ4*01                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-19*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGGG	AGCAGTGGC	CGCTTCATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGGAGCAGTGGCCGCTTCATCATTGACTAC	ARGGSSGRFIIDY	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	69	2	0	97.2
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	19	5	0	79.2
FR3-IMGT	175	288	114	94	20	0	82.5
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	292	260	32	0	89


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  T  F  S  N  
                    Query_12304  5    TGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTCAGGCTTCTGGATACACCTTCAGCAATT  94
V  89.0% (260/292)  IGHV1-8*01   5    .............................................................CA.....................C..G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  E  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  I  N  P  K  G  G  H  T  G  Y  A  
                    Query_12304  95   ATGAAATCAATTGGGTGCGACAAGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATAAACCCTAAAGGTGGTCACACTGGCTATGCAC  184
V  89.0% (260/292)  IGHV1-8*01   95   ....T.....C...........G...................................G........CA.....A....A..........  184
                                      Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  R  V  T  M  S  T  I  G  S  N  G  T  A  Y  M  E  L  N  R  L  R  S  E  D  T  
                    Query_12304  185  AGAAATTCCAGGGCAGAGTCACCATGAGCACTATTGGTTCAAACGGCACAGCCTACATGGAACTCAACAGGTTGCGATCTGAGGACACGG  274
V  89.0% (260/292)  IGHV1-8*01   185  ....G......................C..GG.ACACC..C.TAA................G..G.G...CC..A...............  274
                                      Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><--------------CDR3-IMGT-------------->                                 
                                      A  V  Y  Y  C  A  R  G  G  S  S  G  R  F  I  I  D  Y  W  G  H  G  S  L  V  T  V  S  S 
                    Query_12304  275  CCGTCTATTACTGTGCGAGAGGCGGGAGCAGTGGCCGCTTCATCATTGACTACTGGGGCCACGGAAGCCTGGTCACCGTCTCCTCA  360
V  89.0% (260/292)  IGHV1-8*01   275  ....G.................----------------------------------------------------------------  296
                                      A  V  Y  Y  C  A  R  G                                                                
D  100.0% (9/9)     IGHD6-19*01  7    --------------------------.........---------------------------------------------------  15
J  95.1% (39/41)    IGHJ4*01     7    ---------------------------------------------................A....C...................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_288604

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            378     3e-107
IGHD1-26*01                                                                                           12.2    35    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y
                    Query_12305  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACCACTTA  90
V  91.7% (266/290)  IGHV1-8*01   6    ..................G...............................................T........C..........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F  A  Q
                    Query_12305  91   TGATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTTGCACA  180
V  91.7% (266/290)  IGHV1-8*01   96   .................................A..G..............A..............C.G...T..........A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D  T  A
                    Query_12305  181  GAGATTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGACACGGC  270
V  91.7% (266/290)  IGHV1-8*01   186  ..AG...C............................C.....A.................GC............G..C..AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_12305  271  CATATATTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  352
V  91.7% (266/290)  IGHV1-8*01   276  .G.G................--------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   -----------------------------...G.....--------------------------------------------  18
J  100.0% (40/40)   IGHJ5*02     11   ------------------------------------------........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_288609

Length=312
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           272     2e-75
IGHD6-19*01                                                                                           12.2    29   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTGGC	GGCTGG	CTTAC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTGGCGGCTGGCTTACGGACGTC	TRGGGWLTDV	227	256	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	112	21	17	4	0	81
FR3-IMGT	113	226	114	101	13	0	88.6
CDR3-IMGT (germline)	227	233	7	6	1	0	85.7
Total	N/A	N/A	220	197	23	0	89.5


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-----CDR2-I
                                       S  G  G  S  I  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  N  I  H  Y  S 
                    Query_12306  14   TCTGGAGGCTCCATCAGTGGTTTCTACTGGAGCTGGATTCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGAATATCCACTACAGT  103
V  89.5% (197/220)  IGHV4-59*01  73   .....T............A...A...............C....................................T.....T.T......  162
                                       S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S 

                                      MGT-----><----------------------------------------------------FR3-IMGT--------------------
                                       G  H  T  N  Y  N  P  S  L  R  S  R  V  I  I  S  L  D  T  S  N  N  Q  I  S  L  K  V  N  S 
                    Query_12306  104  GGGCACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCATCATATCGCTGGACACGTCCAACAACCAGATCTCCCTGAAGGTGAACTCT  193
V  89.5% (197/220)  IGHV4-59*01  163  ...AG.......................A...........C......AG.A...........G......T...........C...G....  252
                                       G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S 

                                      --------------------------------><----------CDR3-IMGT--------->                           
                                       G  T  A  A  D  T  A  L  Y  Y  C  T  R  G  G  G  W  L  T  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_12306  194  GGGACCGCTGCGGACACGGCCCTCTATTATTGTACGAGAGGTGGCGGCTGGCTTACGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  283
V  89.5% (197/220)  IGHV4-59*01  253  .T...................G.G.....C...G......--------------------------------------------------  292
                                       V  T  A  A  D  T  A  V  Y  Y  C  A  R                                                    
D  100.0% (6/6)     IGHD6-19*01  13   ---------------------------------------------......---------------------------------------  18
J  100.0% (40/40)   IGHJ6*02     23   --------------------------------------------------------..................................  56

                                            
                                       S  S 
                    Query_12306  284  TCCTCA  289
J  100.0% (40/40)   IGHJ6*02     57   ......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30093435


Query= Query_288608

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           308     4e-86
IGHD2-15*01                                                                                           29.5    2e-04
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCGGGACG	TGTAGTGGTGGAAACTGCTAC	GTCCATACTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCGGGACGTGTAGTGGTGGAAACTGCTACGTCCATACTCTTGATATC	ARDPGTCSGGNCYVHTLDI	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	222	25	0	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  S  V  T  S  N  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_12307  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGGTTCAGCGTCACCAGCAACTCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.9% (222/247)  IGHV3-53*01  47   ....................G...............C.....GT.......A.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  A  V  I  Y  G  G  G  T  T  R  Y  T  D  S  V  K  G  R  F  T  V  S  R  D  N  F  N  
                    Query_12307  91   AGTGGGTAGCTGTTATTTATGGCGGCGGCACAACACGCTACACAGACTCCGTGAAGGGCCGATTCACCGTTTCCAGAGACAATTTCAACA  180
V  89.9% (222/247)  IGHV3-53*01  137  .......CT.A.........A....T..T.GC...TA....G..........................A.C.............C...G.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------CDR3-IM
                                      N  T  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  P  G  T  C  S  G  G  
                    Query_12307  181  ACACGCTGCATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTCTATTATTGTGCGAGAGATCCCGGGACGTGTAGTGGTGGAA  270
V  89.9% (222/247)  IGHV3-53*01  227  ........T......................................G.G.....C...........-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  90.5% (19/21)    IGHD2-15*01  8    -----------------------------------------------------------------------------...........T.  20

                                      GT----------------------->                                  
                                      N  C  Y  V  H  T  L  D  I  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_12307  271  ACTGCTACGTCCATACTCTTGATATCTGGGGCCAAGGGACAAGGGTCACCGTCTCTTCAG  330
D  90.5% (19/21)    IGHD2-15*01  21   G.......----------------------------------------------------  28
J  97.6% (41/42)    IGHJ3*02     9    ------------------........................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_85514

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12308  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_12308  91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_12308  181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12308  271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_122598

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           349     3e-98
IGHD1-1*01                                                                                            16.1    2.5  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	T	GTACAACT	T	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGTACAACTTTTACTTCTATCACTATGGTATGGACGTC	ARVYNFYFYHYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	61	8	0	88.4
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	256	33	0	88.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  P  E  V  K  E  P  G  A  S  V  K  V  S  C  R  T  S  G  Y  I  F  P  N  S 
                    Query_12309  2    CAGCTGGTGCAGTCTGGACCTGAGGTTAAGGAACCTGGGGCCTCAGTGAAAGTCTCCTGCCGGACTTCTGGTTACATCTTTCCCAATTCT  91
V  88.6% (256/289)  IGHV1-18*01  7    ..................G.......G...A.G.................G.........AA.G............C....A...GC.A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  L  G  W  V  R  Q  A  P  G  R  G  L  E  W  V  G  W  I  T  A  Y  S  G  N  T  H  Y  A  Q 
                    Query_12309  92   GGTCTCGGCTGGGTGCGCCAGGCCCCTGGGCGAGGGCTTGAGTGGGTGGGATGGATCACCGCTTACAGTGGAAATACACACTATGCACAG  181
V  88.6% (256/289)  IGHV1-18*01  97   ...A..A..........A...........A.A.............A............G........A...T..C...A...........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  L  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_12309  182  AGCCTCCAGGGCAGAGTCACCATGACCAGAGACACTTCCACGAGTACAGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  88.6% (256/289)  IGHV1-18*01  187  .AG.........................C......A........C........C....................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       I  Y  F  C  A  R  V  Y  N  F  Y  F  Y  H  Y  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_12309  272  ATATATTTCTGTGCGAGAGTGTACAACTTTTACTTCTATCACTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTTATCGTCTCCTCA  361
V  88.6% (256/289)  IGHV1-18*01  277  G.G....A...........-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (8/8)     IGHD1-1*01   2    --------------------........--------------------------------------------------------------  9
J  90.2% (55/61)    IGHJ6*02     2    -----------------------------.....A...CT....C................................C.C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_122599

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD1-1*01                                                                                            14.1    9.4   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GGGAGGGGG	CAACTGG	GAACCCTTTAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTAC	ARGGGNWEPFTY	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	46	5	0	90.2
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	294	5	4	1	0	80
Total	N/A	N/A	292	269	23	0	92.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_12310  3    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCG  92
V  92.1% (269/292)  IGHV5-51*01  2    ....G.....G..........................................................G............C......A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      A  Y  W  L  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  I  V  F  P  D  D  S  D  T  R  Y  
                    Query_12310  93   CCTACTGGCTCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGATCGTTTTTCCTGATGACTCTGATACCAGATACA  182
V  92.1% (269/292)  IGHV5-51*01  92   G.......A.............C..G.........A..........G............A.C.A.....G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  H  I  T  I  S  A  D  K  S  I  T  T  A  F  L  Q  W  N  S  L  K  A  S  D  
                    Query_12310  183  GCCCGTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCACCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACA  272
V  92.1% (269/292)  IGHV5-51*01  182  ...........C.......GG...........................G........A...........G....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  I  Y  Y  C  A  R  G  G  G  N  W  E  P  F  T  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12310  273  CCGCCATCTATTACTGTGCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  92.1% (269/292)  IGHV5-51*01  272  .......G...........G..-----------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    -------------------------------.......-------------------------------------------------  11
J  100.0% (38/38)   IGHJ4*02     11   -------------------------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_122592

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*13                                                                                           371     7e-105
IGHD1-1*01                                                                                            16.1    2.3   
IGHJ4*02                                                                                              52.6    5e-11 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*13	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGGA	GTACTG	ACTGGAAC	CACATCGGCGACC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGAGTACTGACTGGAACCACATCGGCGACCTTGACTTC	ARSTDWNHIGDLDF	263	304	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	44	2	0	95.7
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	148	21	20	1	0	95.2
FR3-IMGT	149	262	114	108	6	0	94.7
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	269	253	16	0	94.1


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  S  F  S  G  F  S  L  R  S  R  G  M  C  V  T  W  I  R
                    Query_12311  1    GCTGGTGAAACCCACACAGACCCTAACACTGACCTGCAGCTTCTCTGGATTCTCACTCAGAAGTCGTGGAATGTGTGTGACCTGGATCCG  90
V  94.1% (253/269)  IGHV2-70*13  30   ........................C.............C.........G...........C.C.A...............G.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  E  D  D  K  R  Y  S  T  S  L  K  T  R  L  A
                    Query_12311  91   CCAGCCCCCAGGGAAGGCCCTAGAGTGGCTTGCACTCATTGATTGGGAGGATGATAAACGCTACAGCACATCTCTGAAGACCAGGCTCGC  180
V  94.1% (253/269)  IGHV2-70*13  120  T....................G..........................T.........TA............................A.  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  A  D  T  A  T  Y  Y  C  A  R  S
                    Query_12311  181  CATCTCCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGCTGACACAGCCACATATTATTGTGCACGGAG  270
V  94.1% (253/269)  IGHV2-70*13  210  ...........................................................TG...........G................-  298
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                      ---------CDR3-IMGT--------------->                                  
                                        T  D  W  N  H  I  G  D  L  D  F  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_12311  271  TACTGACTGGAACCACATCGGCGACCTTGACTTCTGGGGCCAGGGAAGTCTCGTCATCGTCTCCTCAG  338
D  100.0% (8/8)     IGHD1-1*01   7    -----........-------------------------------------------------------  14
J  88.1% (37/42)    IGHJ4*02     7    --------------------------......A..............CC..G....C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_122593

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12312  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12312  91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_12312  181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  95.5% (231/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12312  271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_122590

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           332     4e-93
IGHD3-16*02                                                                                           33.4    1e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCAGGCCGG	TTACGTTTGGGGGAGGTTTCGTT	TTTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCAGGCCGGTTACGTTTGGGGGAGGTTTCGTTTTTCCTACGTTGACCAC	ARGQAGYVWGRFRFSYVDH	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  E  S  F  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_12313  4    CCCTGAGACTCTCCTGTGCTGTCTATGGTGAGTCCTTCAGTGGTTACTACTGGAACTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  93.4% (228/244)  IGHV4-34*01  50   .....TCC...A....C.............G.......................G...................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  R  H  S  G  S  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_12313  94   GGATTGGGGAAATCAGGCATAGTGGAAGCACCTACTACAACGCGTCCCTCAAGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAACC  183
V  93.4% (228/244)  IGHV4-34*01  140  ...............AT...............A........C...............................A................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      Q  F  S  L  R  L  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  Q  A  G  Y  V  W  G  R  
                    Query_12313  184  AGTTCTCCCTGAGGTTGACCTCTGTGAGCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCCAGGCCGGTTACGTTTGGGGGAGGT  273
V  93.4% (228/244)  IGHV4-34*01  230  ............A.C...G........C....................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  91.3% (21/23)    IGHD3-16*02  10   -------------------------------------------------------------------------...............T.  26

                                      ---------------------->                                  
                                      F  R  F  S  Y  V  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12313  274  TTCGTTTTTCCTACGTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  91.3% (21/23)    IGHD3-16*02  27   A.....---------------------------------------------------  32
J  95.7% (45/47)    IGHJ4*02     2    ----------....T.....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_122591

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           297     7e-83
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTATTACGGTATGGACGTC	AREAYSYYGMDV	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	217	27	0	88.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  A  N  H  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_12314  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCGCTAATCACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  88.9% (217/244)  IGHV4-59*01  50   .....TCC...A..........................AG..G.T.........G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  I  S  H  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  T  A  D  K  S  K  N  
                    Query_12314  94   GGATTGCCTATATCTCTCACAGTGGGGGCACCAATTACAACCGCTCCCTCAAGAGTCGAGTCACCATAACAGCGGACAAGTCCAAGAACC  183
V  88.9% (217/244)  IGHV4-59*01  140  ......GG.......A.T........A.......C.......C.........................T...TA....C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D  
                    Query_12314  184  AGTTTTCCCTGAAGGTGAGATCTGTGACCGCCGCGGACACGGCCGTATATTATTGTGCCAGAGAGGCCTACTCTTATTACGGTATGGACG  273
V  88.9% (217/244)  IGHV4-59*01  230  ....C.........C....C...........T..............G.....C.....G.....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  91.4% (53/58)    IGHJ6*02     5    -------------------------------------------------------------------.....AC..C.............  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_12314  274  TCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  308
J  91.4% (53/58)    IGHJ6*02     28   ..........A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_122596

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         313     2e-87
IGHD2-15*01                                                                                           31.5    6e-05
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GGAGAGGGTTGTCGCGCTT	TTGTAGTGCTGGTAGCTGC	GAACTCTC	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGGGAGAGGGTTGTCGCGCTTTTGTAGTGCTGGTAGCTGCGAACTCTCCGGTATGGACGTC	ATGRGLSRFCSAGSCELSGMDV	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	225	25	0	90


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  V  V  S  G  G  S  I  T  S  G  A  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_12315    1    ACCCTGTCCCTCACCTGCGTTGTCTCTGGTGGCTCCATTACCAGTGGGGCTTCCTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  90.0% (225/250)  IGHV4-30-4*01  49   ..................AC..................C.G......T.A..A.....................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  N  I  H  H  S  G  N  T  Y  Y  N  P  S  L  K  S  R  I  T  I  S  I  D  R  S 
                    Query_12315    91   CTGGAGTGGATTGGGAACATCCATCACAGCGGGAACACCTACTACAACCCGTCCCTCAAGAGTCGAATTACCATATCCATAGATAGGTCC  180
V  90.0% (225/250)  IGHV4-30-4*01  139  ...............T.....T..T....T....G...............................G..........AG....C.C....  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------------
                                         K  N  Q  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  R  G  L  S  R  F 
                    Query_12315    181  AAAAACCAGCTCTCCCTGAACCTGAACTCTGTAACAGCCGCGGACACGGCCGTGTATTACTGTGCCACAGGGAGAGGGTTGTCGCGCTTT  270
V  90.0% (225/250)  IGHV4-30-4*01  229  ..G......T..........G....G......G..T.....A.........................G..--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.7% (18/19)    IGHD2-15*01    7    -----------------------------------------------------------------------------------------.  7

                                        --CDR3-IMGT--------------------------->                                 
                                         C  S  A  G  S  C  E  L  S  G  M  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_12315    271  TGTAGTGCTGGTAGCTGCGAACTCTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  342
D  94.7% (18/19)    IGHD2-15*01    8    .......G..........------------------------------------------------------  25
J  97.8% (45/46)    IGHJ6*02       17   --------------------------..................................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_122597

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           319     2e-89
IGHD6-13*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTCC	TAGTAGCAGCTGGTA	GTGTGAAGAAGAATCGCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTCCTAGTAGCAGCTGGTAGTGTGAAGAAGAATCGCAACTACTACGCTGTGGACGTC	AKDLLVAAGSVKKNRNYYAVDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         F  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  G  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_12316  1    GGTTCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTCGCTATGGCATGTACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-30*18  47   ...C........................................A...........C.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  S  Y  D  G  S  Y  K  S  H  A  D  F  V  E  G  R  F  T  V  S  R  D  N  S  
                    Query_12316  91   AGTGGGTTGCTTTTATTTCATATGATGGGAGTTACAAATCCCATGCCGACTTCGTGGAGGGCCGATTCACTGTCTCCAGGGACAATTCCA  180
V  90.8% (227/250)  IGHV3-30*18  137  .......G..AG....A...........A...A.T....A.T....A....C....A.............CA.......A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      R  N  T  L  Y  L  Q  M  N  S  Q  R  A  E  D  T  A  V  Y  Y  C  A  K  D  L  L  V  A  A  G  
                    Query_12316  181  GGAACACGCTGTATCTACAAATGAACAGCCAGAGAGCTGAGGACACGGCTGTTTATTATTGTGCGAAAGATCTCCTAGTAGCAGCTGGTA  270
V  90.8% (227/250)  IGHV3-30*18  227  A...............G.............T.....................G.....C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (14/15)    IGHD6-13*01  6    ---------------------------------------------------------------------------...C...........  20

                                      -CDR3-IMGT--------------------------->                                 
                                      S  V  K  K  N  R  N  Y  Y  A  V  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_12316  271  GTGTGAAGAAGAATCGCAACTACTACGCTGTGGACGTCTGGGGCCGGGGGACCACGGTCACCGTCTCCTCA  341
J  92.5% (49/53)    IGHJ6*02     10   ------------------.........G.A...............AA........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_198421

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	273	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_12317  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  94.8% (273/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_12317  91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  94.8% (273/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  P  Q  W  S  G  L  K  A  S  D  T  A
                    Query_12317  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCCGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (273/288)  IGHV5-51*01  186  ...............G.........................T..............T..........A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12317  271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  94.8% (273/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_198420

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           344     6e-97
IGHD6-13*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTGG	GCACCAGCTGG	GCCGGG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTGGGCACCAGCTGGGCCGGGTGACTCC	ARHWAPAGPGDS	267	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	80	30	27	3	0	90
FR2-IMGT	81	131	51	49	2	0	96.1
CDR2-IMGT	132	152	21	16	5	0	76.2
FR3-IMGT	153	266	114	101	13	0	88.6
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	247	27	0	90.1


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  N  L  S  L  I  C  T  V  S  G  A  S  I  S  S  S  H  Y  Y  W  G  W  
                    Query_12318  1    CAGGACTGGTGAAGCCCTCGGAGAACCTGTCCCTCATATGCACTGTCTCTGGTGCCTCCATCAGCAGTAGTCATTACTACTGGGGCTGGA  90
V  90.1% (247/274)  IGHV4-39*01  26   ................T.......C...........CC................G................AG.................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  S  P  G  K  G  L  E  W  I  G  S  I  D  Y  D  G  R  T  F  H  N  P  S  L  K  S  R  
                    Query_12318  91   TCCGCCAGTCCCCAGGGAAGGGCCTGGAGTGGATTGGGAGTATCGATTACGATGGGAGAACCTTCCACAATCCGTCTCTCAAGAGTCGAG  180
V  90.1% (247/274)  IGHV4-39*01  116  ........C.............G.....................T....TAG......C....A.T....C.....C.............  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  V  S  S  D  T  S  K  N  Q  F  S  V  R  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  
                    Query_12318  181  TCACCGTGTCCTCAGACACGTCCAAGAACCAGTTCTCCGTGAGGCTGAGTTCCGTGACCGCCGCAGACACGGCTCTGTATTACTGTGCGA  270
V  90.1% (247/274)  IGHV4-39*01  206  .....A.A...GT.........................C...A......C..T.....................G...............  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------CDR3-IMGT------------>                                  
                                      R  H  W  A  P  A  G  P  G  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12318  271  GACATTGGGCACCAGCTGGGCCGGGTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  336
V  90.1% (247/274)  IGHV4-39*01  296  ....--------------------------------------------------------------  299
                                      R                                                                 
D  90.9% (10/11)    IGHD6-13*01  8    --------...G.......-----------------------------------------------  18
J  95.1% (39/41)    IGHJ4*02     8    -------------------------.....A..............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_198427

Length=411
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           383     1e-108
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	CCAACCCTCCT	TGATAATAGTGGTTATTAC	GACGAGGGCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACCAACCCTCCTTGATAATAGTGGTTATTACGACGAGGGCGACTACTACGGTAAGGAGGTC	VRPTLLDNSGYYDEGDYYGKEV	288	353	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	69	5	0	93.2
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	173	24	19	2	3	79.2
FR3-IMGT	174	287	114	107	7	0	93.9
CDR3-IMGT (germline)	288	293	6	5	1	0	83.3
Total	N/A	N/A	293	271	19	3	92.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  S  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  L  T  
                    Query_12319  4    AGGTCCAGCTGGTACAGTCTGGATCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAGGATCTCCTGTAAGGGCTCTGGATACAGCCTTACCA  93
V  92.5% (271/293)  IGHV5-51*03  2    ....G........G.........G..............................A...............T............T......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y     R  D  S  D  A  R  Y  
                    Query_12319  94   GTTATTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCGTCTATC---GTGACTCTGATGCCAGATACA  180
V  92.5% (271/293)  IGHV5-51*03  92   .C..C..................................................G...A......CTG...........A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  Q  G  Q  V  T  M  S  V  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  
                    Query_12319  181  ACCCGTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGCGGAGCCTGAAGGCCTCGGACA  270
V  92.5% (271/293)  IGHV5-51*03  182  G...........................C....C..................................A.C...................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------------------CDR3-IMGT--------------------------->       
                                      T  A  T  Y  Y  C  V  R  P  T  L  L  D  N  S  G  Y  Y  D  E  G  D  Y  Y  G  K  E  V  W  G  
                    Query_12319  271  CCGCCACATATTACTGTGTGAGACCAACCCTCCTTGATAATAGTGGTTATTACGACGAGGGCGACTACTACGGTAAGGAGGTCTGGGGCC  360
V  92.5% (271/293)  IGHV5-51*03  272  ......TG..........C....-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  94.7% (18/19)    IGHD3-22*01  10   ----------------------------------.....G.............-------------------------------------  28
J  92.5% (49/53)    IGHJ6*02     10   ---------------------------------------------------------------............T...C..........  36

                                                                
                                      R  G  T  T  V  T  V  S  S 
                    Query_12319  361  GAGGGACTACGGTCACCGTCTCCTCA  386
J  92.5% (49/53)    IGHJ6*02     37   A......C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40288536


Query= Query_198426

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           391     6e-111
IGHD1-26*01                                                                                           10.3    135   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TCAGGCACGAGAA	GGGAG	GCGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGGCACGAGAAGGGAGGCGGGGCGAACGACTAC	VRHEKGGGANDY	292	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	73	1	0	98.6
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	105	9	0	92.1
CDR3-IMGT (germline)	292	292	1	1	0	0	100
Total	N/A	N/A	288	269	19	0	93.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P  
                    Query_12320  5    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCCA  94
V  93.4% (269/288)  IGHV5-51*03  2    ....G............................................................................GC...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  A  D  S  D  T  R  Y  
                    Query_12320  95   ATTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAACATCTATCCTGCAGACTCTGACACCAGATACA  184
V  93.4% (269/288)  IGHV5-51*03  92   GC.......................................................T...........GT........T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  L  T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_12320  185  GTCTGACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACA  274
V  93.4% (269/288)  IGHV5-51*03  182  .C.C.T.....C.............................................................C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      S  G  V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_12320  275  GCGGCGTGTATTATTGTGTCAGGCACGAGAAGGGAGGCGGGGCGAACGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  361
V  93.4% (269/288)  IGHV5-51*03  272  C..C.A.......C....---------------------------------------------------------------------  289
                                      T  A  M  Y  Y  C                                                                       
D  100.0% (5/5)     IGHD1-26*01  9    -------------------------------.....---------------------------------------------------  13
J  97.5% (39/40)    IGHJ4*02     9    -----------------------------------------------.............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_198425

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           349     2e-98
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AACTCGTTCGGA	TTTTGGAGTGGTTATTA	CAAAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAACTCGTTCGGATTTTGGAGTGGTTATTACAAATTACTATGGTATGGACGTC	ARETRSDFGVVITNYYGMDV	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  R  F  H  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12321  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTCGCTTCCACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.1% (235/247)  IGHV3-53*01  47   ............................................A..AA.T.......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  D  D  Y  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_12321  91   AGTGGGTCTCAGTTATTTATAGCGATGATTACACATACTACGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAATTCCAAGA  180
V  95.1% (235/247)  IGHV3-53*01  137  ........................G..G.AG..............................A............................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------------CDR3-
                                      N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  T  R  S  D  F  G  V  
                    Query_12321  181  ACACACTGTATCTTCAAATGAGCAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAGAGAAACTCGTTCGGATTTTGGAGTGG  270
V  95.1% (235/247)  IGHV3-53*01  227  ....G................A...........................G.................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (17/17)   IGHD3-3*01   11   -------------------------------------------------------------------------------...........  21

                                      IMGT------------------------>                                 
                                      V  I  T  N  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12321  271  TTATTACAAATTACTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (17/17)   IGHD3-3*01   22   ......--------------------------------------------------------  27
J  98.0% (50/51)    IGHJ6*02     12   -----------.....C.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_198424

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           343     2e-96
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12322  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (232/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  P  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_12322  91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCCCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-59*01  139  ........G..................A...............C.T.................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_12322  181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  94.7% (232/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_12322  271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_198429

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           336     1e-94
IGHD5-18*01                                                                                           27.6    8e-04
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCTACCGGAA	GTGGATACAACTATGGT	AAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCTACCGGAAGTGGATACAACTATGGTAATAACTGGTTCGACCCG	ARDPTGSGYNYGNNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	230	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  A  S  V  S  H  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_12323  1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGCCTCCGTCAGTCATTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  93.9% (230/245)  IGHV4-59*02  49   ...................C...........G..........AG.........................C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       R  I  G  Y  I  Y  Y  G  G  I  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_12323  91   AGGATTGGATATATCTATTACGGGGGGATCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  93.9% (230/245)  IGHV4-59*02  139  T.......G............A.T....G...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  Y 
                    Query_12323  181  CAGTTCTCCCTGAGGCTGAGCTCTCTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGACCCTACCGGAAGTGGATACAACTAT  270
V  93.9% (230/245)  IGHV4-59*02  229  .............A..........G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD5-18*01  1    ----------------------------------------------------------------------------.........G....  14

                                      -------------------->                                  
                                       G  N  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12323  271  GGTAATAACTGGTTCGACCCGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  94.1% (16/17)    IGHD5-18*01  15   ...----------------------------------------------------  17
J  98.0% (48/49)    IGHJ5*02     3    ------..............C..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_198428

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           37.2    1e-06 
IGHJ5*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCCCTCCTT	TGGTTCGGGGAGTTATTAT	GCTCAAG	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCCTCCTTTGGTTCGGGGAGTTATTATGCTCAAGCC	ARGPSFGSGSYYAQA	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12324  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_12324  91   CTCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..G...............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  P  S  F  G  S  G 
                    Query_12324  181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCCCTCCTTTGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .........................G................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (19/19)   IGHD3-10*01  10   --------------------------------------------------------------------------------..........  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  A  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12324  271  AGTTATTATGCTCAAGCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (19/19)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ5*02     16   ----------------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_255098

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           279     3e-77
IGHD3-10*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGGACATGTTAG	GGTTCGGGGA	CTTGGTTCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACATGTTAGGGTTCGGGGACTTGGTTCCCTTTGCCCAC	ARDMLGFGDLVPFAH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	212	34	0	86.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  S  Y  A  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12325  1    GGTCCCTGAGACTCTCCTGTGCGGTCTCTGGATTCACCTTTTCCAGTTATGCCATCTCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  86.2% (212/246)  IGHV3-23*01  47   ......................A.C................AG...C........GAG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  G  D  S  A  A  K  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_12325  91   AGTGGGTCTCAGGCATCGGTGACAGTGCTGCCAAGACATATTACGCAGACTCCGTGAGGGGACGATTCACCATCTCCAGAGACAATTCCA  180
V  86.2% (212/246)  IGHV3-23*01  137  ............CT..TA...GT....G..GT.GC.....C................A...C..G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  M  T  V  Y  L  Q  M  N  S  L  R  P  E  D  T  A  M  Y  F  C  A  R  D  M  L  G  F  G  D  
                    Query_12325  181  GAATGACGGTATATCTGCAAATGAACAGTCTGAGACCCGAGGACACGGCCATGTATTTCTGTGCGAGGGACATGTTAGGGTTCGGGGACT  270
V  86.2% (212/246)  IGHV3-23*01  227  AG.AC...C.G.................C......G..............G.A....A........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD3-10*01  11   ------------------------------------------------------------------------------..........--  20

                                      ---------------->                                  
                                      L  V  P  F  A  H  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_12325  271  TGGTTCCCTTTGCCCACTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  321
J  90.9% (40/44)    IGHJ4*02     5    -------.....A.T..............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_105332

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD3-10*01                                                                                           39.1    3e-07
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ACGGAGAA	TACTATGGTTCGGGGAGTTA	GGCGTCTT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAACGGAGAATACTATGGTTCGGGGAGTTAGGCGTCTTGGTATGGACGTC	ARTENTMVRGVRRLGMDV	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	242	227	15	0	93.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  G  R  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_12326  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCGGCAGATTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.8% (227/242)  IGHV4-59*01  50   .....TCC...A....C.....................A.T..T.A............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_12326  94   GGATTGGATATATTTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAACC  183
V  93.8% (227/242)  IGHV4-59*01  140  .......G.....C...........................................................A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  E  N  T  M  V  R  G  V  
                    Query_12326  184  ACTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAACGGAGAATACTATGGTTCGGGGAGTTA  273
V  93.8% (227/242)  IGHV4-59*01  230  .G............C............................................A..----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (20/20)   IGHD3-10*01  5    ----------------------------------------------------------------------....................  24

                                      ------------------->                                 
                                      R  R  L  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12326  274  GGCGTCTTGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (45/45)   IGHJ6*02     18   --------.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_255094

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           336     1e-94
IGHD3-3*01                                                                                            18.0    0.57 
IGHJ4*02                                                                                              44.9    1e-08


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGACATCCTT	TTACGATTT	N/A	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGACATCCTTTTACGATTTCTTCGACTTC	ARLTSFYDFFDF	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  V  S  S  G  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G 
                    Query_12327  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCGTCAGCAGTGGCAGTTACTACTGGAACTGGATCCGGCAGCCCCCCGGGAAGGGA  90
V  93.2% (232/249)  IGHV4-61*01  49   ..................A............................T.............G..................A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  R  T  N  N  N  P  S  L  K  N  R  V  T  I  S  V  D  T  S 
                    Query_12327  91   CTGGAGTGGATTGGGAATATCTATTACAGTGGGCGCACCAATAACAACCCGTCCCTCAAGAATCGAGTCACCATATCAGTAGACACGTCC  180
V  93.2% (232/249)  IGHV4-61*01  139  ...............T.................A.......CT.......C..........G............................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  H  Q  F  S  L  K  L  N  S  V  T  A  S  D  T  A  I  Y  Y  C  A  R  L  T  S  F  Y  D  F 
                    Query_12327  181  AAGCACCAGTTCTCCCTGAAGCTGAATTCTGTGACCGCGTCGGACACGGCCATTTATTACTGTGCGAGACTGACATCCTTTTACGATTTC  270
V  93.2% (232/249)  IGHV4-61*01  229  ...A.....................GC...........TG...........G.G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-3*01   4    --------------------------------------------------------------------------------.........-  12
J  84.1% (37/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  F  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_12327  271  TTCGACTTCTGGGGTCAGGGAATTTTAGTCACCGTCTCCTCAG  313
J  84.1% (37/44)    IGHJ4*02     6    ..T....A......C.......CCC.G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_255095

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           343     2e-96
IGHD3-9*01                                                                                            23.8    0.011
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GATCCAC	GTATAACGATGTTTTGCCTGG	CCAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATCCACGTATAACGATGTTTTGCCTGGCCATAACTGGTTCGACCCC	ARGSTYNDVLPGHNWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  L  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12328  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCATTCTCAGTAGTTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-48*03  47   ....................G...............CCT...................C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  G  V  S  Y  I  S  V  R  G  T  T  I  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  H  A  
                    Query_12328  91   AGGGGGTTTCATACATTAGTGTTAGAGGTACTACCATATACTACGCAGACTCTGTGCAGGGCCGATTTACCATCTCTAGAGACCACGCCA  180
V  94.0% (234/249)  IGHV3-48*03  137  ..T.................AG...T....G.........................A..........C........C......A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      T  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  S  T  Y  N  D  V  
                    Query_12328  181  CGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGGATCCACGTATAACGATGTTT  270
V  94.0% (234/249)  IGHV3-48*03  227  A....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  85.7% (18/21)    IGHD3-9*01   1    ----------------------------------------------------------------------------....T.....A...  14

                                      IMGT--------------------->                                
                                      L  P  G  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12328  271  TGCCTGGCCATAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  328
D  85.7% (18/21)    IGHD3-9*01   15   ..A....---------------------------------------------------  21
J  100.0% (47/47)   IGHJ5*02     3    -----------...............................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_255096

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           332     3e-93
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	ACCCATT	TTGCAGTGGTGGTAGGTGC	GTCTCGGGCTTGAGA	GACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCATTTTGCAGTGGTGGTAGGTGCGTCTCGGGCTTGAGAGACCAC	ARDPFCSGGRCVSGLRDH	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  S  G  Y  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_12329  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGCCCTTCAGTGGCTACTACTGGAACTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  93.4% (228/244)  IGHV4-34*01  49   .................................T..........T..........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  R  G  G  S  T  T  Y  N  P  S  L  K  S  R  V  S  M  S  V  D  T  S  K  N 
                    Query_12329  91   TGGATTGGGGAAATCAATCGCGGTGGAAGCACCACCTACAACCCGTCCCTCAAGAGTCGAGTCAGCATGTCGGTAGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-34*01  139  ...................ATA............A.............................C...A..A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  F  C  S  G  G  R  C 
                    Query_12329  181  CAGTTCTCCTTGACCCTGACCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGACCCATTTTGCAGTGGTGGTAGGTGC  270
V  93.4% (228/244)  IGHV4-34*01  229  .........C...AG....G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  89.5% (17/19)    IGHD2-15*01  7    -----------------------------------------------------------------------...T...........C...  25

                                      -------------------->                                  
                                       V  S  G  L  R  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12329  271  GTCTCGGGCTTGAGAGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.5% (39/40)    IGHJ4*02     9    ---------------...T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_255097

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           416     2e-118
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCGTGTGAA	GGTTCGGGGAATTAT	CCCTTGGCAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCGTGTGAAGGTTCGGGGAATTATCCCTTGGCAGAC	AACEGSGNYPLAD	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	276	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  I  S  C  K  A  S  G  G  T  F  S  S  S
                    Query_12330  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGATCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTC  90
V  96.5% (276/286)  IGHV1-69*06  6    ..................G.................................G....................................A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  D  T  A  N  Y  A  Q
                    Query_12330  91   TGCTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGATACAGCAAATTACGCACA  180
V  96.5% (276/286)  IGHV1-69*06  96   ........G..............................................................G.........C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  D  Y  M  E  L  R  S  L  S  S  E  D  T  A
                    Query_12330  181  GAGGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGACTACATGGAGCTGCGCAGCCTGAGCTCTGAGGACACGGC  270
V  96.5% (276/286)  IGHV1-69*06  186  ..A...............................................C.............A..........A..............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  A  C  E  G  S  G  N  Y  P  L  A  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12330  271  CGTGTATTACTGTGCGGCGTGTGAAGGTTCGGGGAATTATCCCTTGGCAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  96.5% (276/286)  IGHV1-69*06  276  ................----------------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                       
D  93.3% (14/15)    IGHD3-10*01  11   -------------------------..........G....----------------------------------------------  25
J  100.0% (36/36)   IGHJ4*02     13   --------------------------------------------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_255091

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12331  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12331  91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_12331  181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_12331  271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGCCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  95.3% (41/43)    IGHJ4*02     6    -----------------------..........................G.T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_255093

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            330     1e-92
IGHD3-16*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCAGCCTGATCGGGACAG	TGCTTAT	N/A	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCAGCCTGATCGGGACAGTGCTTATTAC	ASQPDRDSAYY	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  I  S  G  V  S  F  S  R  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12332  1    ACCCTGTCCCTCACCTGCGCTATATCTGGTGTCTCCTTCAGTAGAAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  93.1% (228/245)  IGHV4-4*02   49   .....................G.C.......G....A....C..T.G.......................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  D  S  G  S  T  N  Y  N  E  S  L  K  S  R  V  T  I  S  I  D  K  S  K 
                    Query_12332  91   GAGTGGATTGGGGAAATCTCTGATAGTGGGAGCACCAACTACAACGAGTCTCTCAAGAGTCGAGTCACCATATCAATAGACAAGTCCAAG  180
V  93.1% (228/245)  IGHV4-4*02   139  ...................A.C.......................CC...C........................G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  H  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  Q  P  D  R  D  S  A  Y 
                    Query_12332  181  AACCAATTCTCCCTGCATCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGCCAGCCTGATCGGGACAGTGCTTAT  270
V  93.1% (228/245)  IGHV4-4*02   229  .....G.........A.G...............................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-16*01  28   -----------------------------------------------------------------------------------.......  34

                                      -->                                  
                                       Y  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_12332  271  TACTGGGGCCAGGGAACCCTGGCCACCGTCTCCTCAG  307
J  97.3% (36/37)    IGHJ4*02     12   ......................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_102255

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            308     4e-86
IGHD3-16*01                                                                                           12.2    32   
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCTCTCCTAGAAGTGTCTGGGCGAGGG	GGGGGA	CT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCTCTCCTAGAAGTGTCTGGGCGAGGGGGGGGACTTGGTTCGTCCCC	AASPRSVWARGGTWFVP	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	100	14	0	87.7
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	220	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  D  S  I  G  I  T  K  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12333  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCATCGGCATTACTAAGTGGTGGAGTTGGGTCCGCCAGCCTCCAGGGAAGGGGCTG  90
V  90.5% (220/243)  IGHV4-4*02   49   ...............................G.......A...G..G...C.......................C...............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  A  Y  Y  S  G  S  T  N  Y  N  P  A  L  K  S  R  V  D  I  S  V  D  K  A  K 
                    Query_12333  91   GAGTGGATTGGGGAAGCCTATTATAGTGGGAGCACCAACTACAACCCCGCCCTCAAAAGTCGAGTCGACATATCGGTAGATAAGGCCAAG  180
V  90.5% (220/243)  IGHV4-4*02   139  ...............AT....C.........................GT.......G.........AC......A.....C...T.....  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  A  S  P  R  S  V  W  A  R 
                    Query_12333  181  AACCAGTTCTCCCTGAAGTTAACCTCTATGACCGCCGCGGACACGGCCGTATATTATTGTGCGGCCTCTCCTAGAAGTGTCTGGGCGAGG  270
V  90.5% (220/243)  IGHV4-4*02   229  ..................C.G.G....G......................G.....C......---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            

                                      -------------------->                                  
                                       G  G  T  W  F  V  P  W  G  Q  G  I  Q  V  I  V  S  S  
                    Query_12333  271  GGGGGGACTTGGTTCGTCCCCTGGGGCCAGGGAATCCAGGTCATCGTCTCCTCAG  325
D  100.0% (6/6)     IGHD3-16*01  18   -......------------------------------------------------  23
J  91.3% (42/46)    IGHJ5*02     6    ---------.......A.................C..T.....C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_102254

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD5-18*01                                                                                           25.7    0.003
IGHJ3*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	ATGTTCGGG	TACAGCTATGGTT	TTGTGGGTCCGATG	GATCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAATGTTCGGGTACAGCTATGGTTTTGTGGGTCCGATGGATCCTTTTGATTTC	AKMFGYSYGFVGPMDPFDF	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  F  G  F  P  F  R  S  Y  A  M  A  W  V  R  Q  A  P  G  K  G  L  
                    Query_12334  1    GGTCCCTGAGACTCTCCTGTGCAGCCTTTGGATTCCCCTTTAGAAGCTATGCCATGGCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.5% (227/248)  IGHV3-23*01  47   ...........................C.......A.......C............AG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  F  I  S  G  S  G  D  D  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_12334  91   ATTGGGTCTCATTTATTAGTGGCAGTGGTGACGACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGGGACAACTCCA  180
V  91.5% (227/248)  IGHV3-23*01  137  .G.........GC.........T.......GTAG.....................................A.......A.....T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  M  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  M  F  G  Y  S  Y  G  
                    Query_12334  181  AGAACATGTTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCCATTTATTACTGTGCGAAAATGTTCGGGTACAGCTATGGTT  270
V  91.5% (227/248)  IGHV3-23*01  227  ......C.C...............................G.........G.A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (13/13)   IGHD5-18*01  6    -----------------------------------------------------------------------------.............  18

                                      -IMGT----------------------->                                  
                                      F  V  G  P  M  D  P  F  D  F  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12334  271  TTGTGGGTCCGATGGATCCTTTTGATTTCTGGGGCCAAGGGACAATGGTCACCGTCTCCTCAG  333
J  93.9% (46/49)    IGHJ3*01     2    --------------...G........G...............................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_102253

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           414     5e-118
IGHD2-8*01                                                                                            46.8    1e-09 
IGHJ6*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGTGCC	GGATATTGTACTAATGGTATATGCTAT	TTGTCCTA	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCGTGCCGGATATTGTACTAATGGTATATGCTATTTGTCCTAC	ARERAGYCTNGICYLSY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  G  S  Y
                    Query_12335  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCGTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCGGCAGTTA  90
V  95.5% (278/291)  IGHV1-69*01  6    ..................G.......................C.......................................A....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  M  F  E  T  A  N  Y  A  Q
                    Query_12335  91   TGTTATTACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATGTTTGAGACAGCAAACTACGCACA  180
V  95.5% (278/291)  IGHV1-69*01  96   ..C...C.G.........................................................C....GT.................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  A  S  T  N  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_12335  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGCATCCACGAACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.5% (278/291)  IGHV1-69*01  186  ...................................A........G.............................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  E  R  A  G  Y  C  T  N  G  I  C  Y  L  S  Y  W  G  Q  G  T  T  V  T  V
                    Query_12335  271  CGTGTATTATTGTGCGAGAGAGCGTGCCGGATATTGTACTAATGGTATATGCTATTTGTCCTACTGGGGCCAAGGGACCACGGTCACCGT  360
V  95.5% (278/291)  IGHV1-69*01  276  .........C...........---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  96.3% (26/27)    IGHD2-8*01   2    ----------------------------..................G........-----------------------------------  28
J  97.1% (33/34)    IGHJ6*02     29   ---------------------------------------------------------------...........................  55

                                             
                                        S  S 
                    Query_12335  361  CTCGTCA  367
J  97.1% (33/34)    IGHJ6*02     56   ...C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_102251

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            399     3e-113
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-6*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGTGAGGAACCAGCTCGTATCCGACTTC	ESGEEPARIRL	285	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	95	25	23	1	1	92
FR2-IMGT	96	146	51	50	1	0	98
CDR2-IMGT	147	170	24	23	1	0	95.8
FR3-IMGT	171	284	114	103	11	0	90.4
CDR3-IMGT (germline)	285	291	7	7	0	0	100
Total	N/A	N/A	291	275	15	1	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  Q  Q  L
                    Query_12336  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTTCAGCAGTT  90
V  94.5% (275/291)  IGHV1-8*01   6    ..................G..............................................................-..C.....  94
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F   T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                        *  Y  H  L  G  A  T  G  H  W  T  R  A  *  V  D  G  M  D  E  P  *  *  W  *  H  R  L  C  R
                    Query_12336  91   ATGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCAG  180
V  94.5% (275/291)  IGHV1-8*01   95   .........A.........................................................C.....................C  184
                                      Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                        E  V  P  G  R  S  H  H  D  R  G  H  F  H  N  H  S  L  H  G  D  E  Q  P  K  L  *  R  H  G
                    Query_12336  181  AGAAGTTCCAGGGCGGAGTCACCATGACCGGGGACACTTCCATAACCACAGCCTACATGGAGATGAGCAGCCTAAACTCTGAAGACACGG  270
V  94.5% (275/291)  IGHV1-8*01   185  ..............A..............A..A....C.......G................C..........G.GA.....G.......  274
                                      Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-------------CDR3-IMGT------------>                                  
                                        R  V  L  L  C  E  S  G  E  E  P  A  R  I  R  L  L  G  P  G  N  P  G  H  R  L  L   
                    Query_12336  271  CCGTGTATTACTGTGCGAGAGCGGTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  354
V  94.5% (275/291)  IGHV1-8*01   275  .....................---------------------------------------------------------------  295
                                      A  V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01   9    --------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02     9    --------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_102250

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           420     7e-120
IGHJ3*01                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	N/A	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GGATGCATCTCTTGGCCACGCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGATGCATCTCTTGGCCACGCGTGCTTTTGATGTC	ARGMHLLATRAFDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  E  A  S  G  Y  T  F  T  S  Y 
                    Query_12337  2    CAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCGAGGCTTCTGGTTACACCTTTACCAGCTAC  91
V  96.5% (279/289)  IGHV1-18*04  7    ...................C........................................A.............................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  D  F  A  Q 
                    Query_12337  92   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGGAACACAGACTTTGCACAG  181
V  96.5% (279/289)  IGHV1-18*04  97   .G.....................................................................T......A...A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  V  H  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_12337  182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGTCCACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.5% (279/289)  IGHV1-18*04  187  ...C.............................................C.T......................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  G  M  H  L  L  A  T  R  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12337  272  GTGTATTATTGTGCGAGAGGGATGCATCTCTTGGCCACGCGTGCTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTGTCTTCAG  359
V  96.5% (279/289)  IGHV1-18*04  277  ........C..........---------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                       
J  97.9% (46/47)    IGHJ3*01     4    -----------------------------------------.......................................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_102259

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         360     1e-101
IGHD3-22*01                                                                                           37.2    1e-06 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GATTATTTCCTCC	TATTACTTTGATAGTAGTGGTT	CTTCCCACGAAGGATTCGGCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGATTATTTCCTCCTATTACTTTGATAGTAGTGGTTCTTCCCACGAAGGATTCGGCCACTTTGACTAC	ARIISSYYFDSSGSSHEGFGHFDY	244	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  V  S  S  G  G  Y  S  W  S  W  M  R  Q  P  P  G  K  G 
                    Query_12338    1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCGTCAGCAGTGGTGGTTACTCCTGGAGCTGGATGCGGCAGCCACCAGGGAAGGGC  90
V  96.4% (239/248)  IGHV4-30-2*01  49   .......................C............A...............................C.....................  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  H  I  Y  H  T  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 
                    Query_12338    91   CTGGAGTGGATTGGGCACATCTATCATACTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCC  180
V  96.4% (239/248)  IGHV4-30-2*01  139  ...............T............G.............................................................  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------------
                                         K  N  Q  F  S  L  K  M  S  F  V  T  A  A  D  T  A  V  Y  Y  C  A  R  I  I  S  S  Y  Y  F 
                    Query_12338    181  AAGAACCAGTTCTCCCTGAAGATGAGTTTTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGCCAGGATTATTTCCTCCTATTACTTT  270
V  96.4% (239/248)  IGHV4-30-2*01  229  .....................C....C.C..............................C........----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  95.5% (21/22)    IGHD3-22*01    2    ---------------------------------------------------------------------------------.......A.  10

                                        -----CDR3-IMGT------------------------------>                                 
                                         D  S  S  G  S  S  H  E  G  F  G  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_12338    271  GATAGTAGTGGTTCTTCCCACGAAGGATTCGGCCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  348
D  95.5% (21/22)    IGHD3-22*01    11   .............-----------------------------------------------------------------  23
J  100.0% (44/44)   IGHJ4*02       4    ----------------------------------............................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_102258

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           439     2e-125
IGHD6-6*01                                                                                            21.8    0.045 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGC	ATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGCATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	74	0	0	100
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	112	2	0	98.2
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	287	6	0	98


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_12339  3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCA  92
V  98.0% (287/293)  IGHV5-51*03  2    ..................................................................................C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  F  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_12339  93   ACTTCTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACA  182
V  98.0% (287/293)  IGHV5-51*03  92   G..A...................................................G............................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_12339  183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCGGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  98.0% (287/293)  IGHV5-51*03  182  ...............................A..........................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12339  273  CCGCCATGTATTACTGTGCGAGATGCATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  98.0% (287/293)  IGHV5-51*03  272  .......................----------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                 
D  92.9% (13/14)    IGHD6-6*01   5    --------------------------....C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_281770

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           411     5e-117
IGHD6-25*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGCGGCTA	ATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGCGGCTAATACGGGGCACTACTTTGACTAC	ARRIAAANTGHYFDY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	72	2	0	97.3
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	278	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  
                    Query_12340  2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCA  91
V  94.9% (278/293)  IGHV5-51*03  2    ....G.....G......................................................................G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  T  Y  P  G  G  S  N  T  R  Y  
                    Query_12340  92   GCTACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCACCTATCCTGGTGGCTCTAATACCCGATACA  181
V  94.9% (278/293)  IGHV5-51*03  92   ............G.......................A.......................T...........A....G.....A......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  
                    Query_12340  182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACA  271
V  94.9% (278/293)  IGHV5-51*03  182  .................................................C...........G...............A.....T......  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  V  Y  Y  C  A  R  R  I  A  A  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_12340  272  CCGCCGTCTATTACTGTGCGAGACGAATAGCAGCGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  361
V  94.9% (278/293)  IGHV5-51*03  272  .....A.G...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (13/13)   IGHD6-25*01  5    --------------------------.............---------------------------------------------------  17
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_12340  362  CCTCAG  367
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_248852

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_12341  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_12341  91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_12341  181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_12341  271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_281772

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           372     2e-105
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAC	TATTACTATCGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTATTACTATCGTTCGGGGAGTTATTTTGACTAC	ARGHYYYRSGSYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_12342  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*03  49   ...............................G.............................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12342  91   CTGGAGTGGATTGGACACATCTATTACAGCGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATTTCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*03  139  ..............GT.............T............................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  Y  Y  Y  R  S 
                    Query_12342  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTATTACTATCGTTCG  270
V  97.6% (244/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.8% (23/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------.........G.....  16

                                      ----------------->                                  
                                       G  S  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12342  271  GGGAGTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  95.8% (23/24)    IGHD3-10*01  17   .........-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    ---------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_281773

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           422     3e-120
IGHD2-2*02                                                                                            19.9    0.18  
IGHJ5*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAAAGTGGCGGGGA	ACCAGCTGTTATA	AAGAGCGCTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCC	ARGKWRGTSCYKERCWFDP	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	112	2	0	98.2
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	292	281	11	0	96.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  S  
                    Query_12343  2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTAGCA  91
V  96.2% (281/292)  IGHV5-51*03  2    ....G.....G..........................................................G...........G.....C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  R  Y  
                    Query_12343  92   ACTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATAATCTATCCTGGTGACTCTGAGACCAGATACA  181
V  96.2% (281/292)  IGHV5-51*03  92   G...........G.............................................C....................T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_12343  182  GACCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  96.2% (281/292)  IGHV5-51*03  182  .C........................................................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  M  Y  Y  C  A  R  G  K  W  R  G  T  S  C  Y  K  E  R  C  W  F  D  P  W  G  Q  G  T  
                    Query_12343  272  CCGCCATGTATTATTGTGCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCCTGGGGCCAGGGAACCC  361
V  96.2% (281/292)  IGHV5-51*03  272  .............C........--------------------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                                       
D  92.3% (12/13)    IGHD2-2*02   17   --------------------------------------........C....---------------------------------------  29
J  100.0% (47/47)   IGHJ5*02     5    -------------------------------------------------------------.............................  33

                                                        
                                      L  V  T  V  S  S  
                    Query_12343  362  TGGTCACCGTCTCCTCAG  379
J  100.0% (47/47)   IGHJ5*02     34   ..................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_281774

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           335     4e-94
IGHD3-16*01                                                                                           14.1    8.8  
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TCGCGGAAGGGCTCCGGTGGGAACTCC	TTGGGGG	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGGGATCGCGGAAGGGCTCCGGTGGGAACTCCTTGGGGGTACTTTGACTAC	TRDRGRAPVGTPWGYFDY	249	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	105	9	0	92.1
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	235	21	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12344  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGCTTCAACTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTCG  90
V  91.8% (235/256)  IGHV3-49*04  47   .........................T.....A....C...................................................G.  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  C  I  R  S  Q  G  F  R  G  T  T  E  Y  A  A  S  V  E  G  R  F  T  I  S  R  D  
                    Query_12344  91   AGTGGGTAGGTTGTATTAGAAGTCAAGGTTTTCGTGGGACAACAGAATACGCCGCCTCTGTGGAAGGCAGATTCACCATCTCAAGAGATA  180
V  91.8% (235/256)  IGHV3-49*04  137  ............TC........CA...C..A.G......................G......A..........................G  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      N  S  K  R  I  A  Y  L  Q  L  D  S  L  K  I  E  D  T  A  V  Y  Y  C  T  R  D  R  G  R  A  
                    Query_12344  181  ATTCCAAGAGGATCGCCTATCTGCAACTGGACAGCCTGAAAATCGAGGACACAGCCGTGTATTATTGTACTAGGGATCGCGGAAGGGCTC  270
V  91.8% (235/256)  IGHV3-49*04  227  .......A..C...............A..A............C.....................C........A..--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 

                                      -CDR3-IMGT--------------------->                                  
                                      P  V  G  T  P  W  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12344  271  CGGTGGGAACTCCTTGGGGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  100.0% (7/7)     IGHD3-16*01  16   -------------.......----------------------------------------------  22
J  100.0% (46/46)   IGHJ4*02     3    --------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_281775

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           349     3e-98
IGHD5-12*01                                                                                           18.0    0.64 
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGGGGA	AGTGGCTAC	AAGACTTAGGGGGCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAAGTGGCTACAAGACTTAGGGGGCCCTTTTGACTAC	ARRGKWLQDLGGPFDY	267	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	46	5	0	90.2
CDR2-IMGT	132	152	21	18	3	0	85.7
FR3-IMGT	153	266	114	101	13	0	88.6
CDR3-IMGT (germline)	267	273	7	7	0	0	100
Total	N/A	N/A	273	248	25	0	90.8


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  I  C  T  V  S  G  D  S  L  S  S  S  S  Y  Y  W  G  W  
                    Query_12345  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCATCTGCACTGTCTCTGGTGACTCCCTCAGCAGTAGTAGTTACTACTGGGGCTGGA  90
V  90.8% (248/273)  IGHV4-39*01  26   ................T...................C.................G....A..............................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  P  P  G  K  G  L  E  L  I  G  N  F  Y  Y  G  G  S  P  Y  Y  N  P  S  L  K  G  R  
                    Query_12345  91   TCCGCCAGCCCCCCGGGAAGGGACTGGAGTTGATTGGAAATTTCTATTATGGTGGGAGCCCCTACTATAACCCGTCCCTCAAGGGTCGAG  180
V  90.8% (248/273)  IGHV4-39*01  116  .............A........G.......G......G.G.A........A........A.......C...............A......  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      A  A  I  S  V  D  T  S  K  N  Q  F  S  L  K  V  T  S  V  T  A  A  D  R  A  V  Y  R  C  A  
                    Query_12345  181  CCGCCATTTCCGTTGACACGTCCAAGAACCAATTCTCCCTGAAGGTGACCTCTGTGACCGCCGCAGACAGGGCTGTATATCGCTGTGCGA  270
V  90.8% (248/273)  IGHV4-39*01  206  T.A....A.....A.................G............C...G....................C......G...TA........  295
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------CDR3-IMGT------------------>                                  
                                      R  R  G  K  W  L  Q  D  L  G  G  P  F  D  Y  W  G  Q  G  I  L  V  T  I  S  S  
                    Query_12345  271  GACGGGGGAAGTGGCTACAAGACTTAGGGGGCCCTTTTGACTACTGGGGCCAGGGAATCCTGGTCACCATCTCCTCAG  348
V  90.8% (248/273)  IGHV4-39*01  296  ...---------------------------------------------------------------------------  298
                                      R                                                                             
D  100.0% (9/9)     IGHD5-12*01  9    ---------.........------------------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------......................C..........G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_199652

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD6-13*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGATTTTGGCGAC	AGCAGGAGCTGGTAC	TCTTGG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGATTTTGGCGACAGCAGGAGCTGGTACTCTTGGATGGACGTC	ARGDFGDSRSWYSWMDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  R  S  I  S  S  H  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12346  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTCGCTCCATCAGTAGTCACTACTGGAATTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  95.9% (234/244)  IGHV4-59*01  49   ..............................G..............T.........GC................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_12346  91   TGGATTGGGTATATCTTTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCTCCATTTCAGTAGACACGTCCAAGAAC  180
V  95.9% (234/244)  IGHV4-59*01  139  ................A..............................................A....A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  F  G  D  S  R  S  W 
                    Query_12346  181  CAGTTCTCCCTGAATCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGGGGATTTTGGCGACAGCAGGAGCTGG  270
V  95.9% (234/244)  IGHV4-59*01  229  ..............G................................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD6-13*01  7    ------------------------------------------------------------------------------.....C......  18

                                      ----------------->                                 
                                       Y  S  W  M  D  V  W  G  Q  G  T  T  A  T  V  S  S 
                    Query_12346  271  TACTCTTGGATGGACGTCTGGGGCCAAGGGACCACGGCCACCGTTTCCTCA  321
D  93.3% (14/15)    IGHD6-13*01  19   ...------------------------------------------------  21
J  95.2% (40/42)    IGHJ6*02     21   ---------............................T......C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_281779

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           302     3e-84
IGHD6-13*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GAATGAACACTGC	CTGGTAC	TTGCTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGAACACTGCCTGGTACTTGCTTTACTTTGAAGAC	ARMNTAWYLLYFED	237	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	20	4	0	83.3
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	21	3	0	87.5
FR3-IMGT	123	236	114	106	8	0	93
CDR3-IMGT (germline)	237	240	4	4	0	0	100
Total	N/A	N/A	229	211	18	0	92.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  E  Y  A  M  G  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  L 
                    Query_12347  12   TGTGCAGCCTCTGGATTCACCTTTAGTGAATATGCCATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAAGTCTT  101
V  92.1% (211/229)  IGHV3-23*01  64   ..........................CAGC.........A............................................GC.A..  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  T  G  G  S  T  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_12347  102  AGTGGGACTGGTGGTAGCACATACTACCCAGACTCCGTGAAGGGCCGGTTCACCGTGTCCAGAGACAATTCCAAGAACACTCTGTATCTA  191
V  92.1% (211/229)  IGHV3-23*01  154  .....T.G...................G..........................A.C.......................G........G  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><----------------CDR3-IMGT--------------->   
                                       Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  M  N  T  A  W  Y  L  L  Y  F  E  D  W 
                    Query_12347  192  CAAATGAGCAGCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGAATGAACACTGCCTGGTACTTGCTTTACTTTGAAGACTGG  281
V  92.1% (211/229)  IGHV3-23*01  244  .......A...........................A.....C.......-----------------------------------------  292
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  100.0% (7/7)     IGHD6-13*01  15   --------------------------------------------------------------.......---------------------  21
J  95.7% (44/46)    IGHJ4*02     3    ---------------------------------------------------------------------------........CT.....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_12347  282  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  95.7% (44/46)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_93169

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*13                                                                                           371     7e-105
IGHD1-1*01                                                                                            16.1    2.3   
IGHJ4*02                                                                                              52.6    5e-11 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*13	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGGA	GTACTG	ACTGGAAC	CACATCGGCGTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGAGTACTGACTGGAACCACATCGGCGTCCTTGACTTC	ARSTDWNHIGVLDF	263	304	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	44	2	0	95.7
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	148	21	20	1	0	95.2
FR3-IMGT	149	262	114	108	6	0	94.7
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	269	253	16	0	94.1


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  S  F  S  G  F  S  L  R  S  R  G  M  C  V  T  W  I  R
                    Query_12348  1    GCTGGTGAAACCCACACAGACCCTAACACTGACCTGCAGCTTCTCTGGATTCTCACTCAGAAGTCGTGGAATGTGTGTGACCTGGATCCG  90
V  94.1% (253/269)  IGHV2-70*13  30   ........................C.............C.........G...........C.C.A...............G.........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  E  D  D  K  R  Y  S  T  S  L  K  T  R  L  A
                    Query_12348  91   CCAGCCCCCAGGGAAGGCCCTAGAGTGGCTTGCACTCATTGATTGGGAGGATGATAAACGCTACAGCACATCTCTGAAGACCAGGCTCGC  180
V  94.1% (253/269)  IGHV2-70*13  120  T....................G..........................T.........TA............................A.  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  A  D  T  A  T  Y  Y  C  A  R  S
                    Query_12348  181  CATCTCCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGCTGACACAGCCACATATTATTGTGCACGGAG  270
V  94.1% (253/269)  IGHV2-70*13  210  ...........................................................TG...........G................-  298
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                      ---------CDR3-IMGT--------------->                                  
                                        T  D  W  N  H  I  G  V  L  D  F  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_12348  271  TACTGACTGGAACCACATCGGCGTCCTTGACTTCTGGGGCCAGGGAAGTCTCGTCATCGTCTCCTCAG  338
D  100.0% (8/8)     IGHD1-1*01   7    -----........-------------------------------------------------------  14
J  88.1% (37/42)    IGHJ4*02     7    --------------------------......A..............CC..G....C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_66652

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           290     2e-80
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CTGGAGGGGGC	TTCGGGAAGTTATTATAAC	GGACGGCGGGGGAT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACTGGAGGGGGCTTCGGGAAGTTATTATAACGGACGGCGGGGGATTATGGACGTC	ARLEGASGSYYNGRRGIMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	217	32	0	87.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  F  S  T  T  D  Y  W  V  W  I  R  Q  S  P  G  K  G 
                    Query_12349  1    ACCCTGTCCCTCACCTGCACCGTCTCTGGCGGCTCCATCTTCAGTACTACTGACTACTGGGTCTGGATCCGCCAGAGCCCCGGGAAGGGG  90
V  87.1% (217/249)  IGHV4-39*02  49   ....................T........T.........AG.....G..G.T.........G.............CC...A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  A  I  H  H  T  G  R  T  Y  Y  N  P  S  L  E  S  R  S  T  M  S  A  D  T  S 
                    Query_12349  91   CTGGAGTGGATTGGGGCTATTCATCACACTGGGAGAACCTACTACAACCCGTCCCTCGAGAGTCGATCCACCATGTCCGCAGACACATCC  180
V  87.1% (217/249)  IGHV4-39*02  139  ...............AG...CT..T.T.G......C.....................A........GT......A....T......G...  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       T  N  H  F  S  L  N  L  R  S  V  T  A  A  D  T  S  V  Y  Y  C  A  R  L  E  G  A  S  G  S 
                    Query_12349  181  ACTAACCACTTCTCCCTGAACCTGAGGTCTGTGACCGCCGCAGACACGTCTGTTTATTACTGTGCGCGACTGGAGGGGGCTTCGGGAAGT  270
V  87.1% (217/249)  IGHV4-39*02  229  .AG.................G.....C.....................G....G............A..---------------------  297
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.7% (18/19)    IGHD3-10*01  13   --------------------------------------------------------------------------------......G...  22

                                      DR3-IMGT------------------------>                                 
                                       Y  Y  N  G  R  R  G  I  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12349  271  TATTATAACGGACGGCGGGGGATTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTGTCCTCA  336
D  94.7% (18/19)    IGHD3-10*01  23   .........---------------------------------------------------------  31
J  97.7% (42/43)    IGHJ6*02     20   -----------------------....................................C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_66651

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           353     9e-100
IGHD6-19*01                                                                                           19.9    0.15  
IGHJ6*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGGA	AGCAGTGGCT	ATTTCC	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGGAAGCAGTGGCTATTTCCACGGTATGGACGTC	ARSGSSGYFHGMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12350  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGGAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (237/248)  IGHV3-33*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  T  N  E  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  E  N  S  
                    Query_12350  91   AGTGGGTGGCCGTTATATGGTATGATGGAACTAATGAACATTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGAGAATTCCA  180
V  95.6% (237/248)  IGHV3-33*01  137  ..........A...................G....A..T.C....C....................................C.......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  S  G  S  S  G  Y  F  
                    Query_12350  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGATCGGGAAGCAGTGGCTATTTCC  270
V  95.6% (237/248)  IGHV3-33*01  227  ....................................C...............G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD6-19*01  7    --------------------------------------------------------------------------..........------  16

                                      ------------->                                 
                                      H  G  M  D  V  W  G  Q  G  T  T  V  T  F  S  S 
                    Query_12350  271  ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCTTCTCCTCA  317
J  97.9% (46/47)    IGHJ6*02     16   ......................................G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_248851

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD3-3*01                                                                                            10.3    115   
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGCGGAAA	GATTT	C	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGCGGAAAGATTTCCTACTTTGACTAC	ARRGKISYFDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	235	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  H  G  S  I  S  G  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_12351  1    ACCCTGTCCCTCACCTGCACTGTCTCTCATGGCTCCATCAGTGGTTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  96.7% (235/243)  IGHV4-59*01  49   ...........................GG.............A...A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  G  T  M  S  V  D  T  S  K  N 
                    Query_12351  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGGCACCATGTCAGTAGACACGTCCAAGAAC  180
V  96.7% (235/243)  IGHV4-59*01  139  .............................................................T......A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  K  I  S  Y  F  D  Y 
                    Query_12351  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGACGCGGAAAGATTTCCTACTTTGACTAC  270
V  96.7% (235/243)  IGHV4-59*01  229  ...................G...........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-3*01   8    -----------------------------------------------------------------------.....--------------  12
J  97.9% (46/47)    IGHJ4*02     2    -----------------------------------------------------------------------------.............  14

                                                                        
                                       W  G  L  G  T  L  V  T  V  S  S  
                    Query_12351  271  TGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  304
J  97.9% (46/47)    IGHJ4*02     15   .......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_66657

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           329     3e-92
IGHD2-21*02                                                                                           14.1    8.1  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTTCA	GGTGACT	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTTCAGGTGACTCTTGACTAC	AKDLQVTLDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  I  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12352  1    GGTCCCTGAGAATCTCCTGTGCAGCATCTGGATTCACCTTCAGTAGTTATGCCATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-30*04  47   ...........C.............C....................C.....T..........................C..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  E  K  Y  H  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_12352  91   AATGGGTGGCAGTTATATCATATGATGGAAGTGAGAAATATCACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  92.0% (230/250)  IGHV3-30*04  137  .G..............................A.T.....CT...............A...........................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  G  G  D  T  A  I  Y  Y  C  A  K  D  L  Q  V  T  L  D  
                    Query_12352  181  AGAACACGCTGTACTTGCAAATGAACAGCCTTAGAGGTGGGGACACGGCTATATATTACTGTGCGAAAGATCTTCAGGTGACTCTTGACT  270
V  92.0% (230/250)  IGHV3-30*04  227  .............TC................G....C..A..........G.G.............G...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-21*02  14   ----------------------------------------------------------------------------.......-------  20
J  95.2% (40/42)    IGHJ4*02     7    ------------------------------------------------------------------------------------......  12

                                      ->                                  
                                      Y  W  G  Q  G  A  L  V  P  V  S  S  
                    Query_12352  271  ACTGGGGCCAGGGAGCCCTGGTCCCCGTCTCCTCAG  306
J  95.2% (40/42)    IGHJ4*02     13   ..............A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_157078

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     1e-124
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	73	1	0	98.6
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	112	2	0	98.2
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	286	7	0	97.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  
                    Query_12353  4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGGTACACCTTAACCA  93
V  97.6% (286/293)  IGHV5-51*01  2    ..G.........................................................................A....G...T....  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_12353  94   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACA  183
V  97.6% (286/293)  IGHV5-51*01  92   G...................................................................................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_12353  184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  97.6% (286/293)  IGHV5-51*01  182  .................................C........................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_12353  274  CCGCCATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  363
V  97.6% (286/293)  IGHV5-51*01  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (17/17)   IGHD5-18*01  2    -------------------------------.................------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_12353  364  CCTCAG  369
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_93161

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           329     3e-92
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTACGGGTCGGGAAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCCTCTATTACTACGGGTCGGGAAGTTATTTTGACTCC	VRGLYYYGSGSYFDS	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  S  G  K  G 
                    Query_12354  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCGGCAGTGGTGGTTATTACTGGAGCTGGATTCGCCAGCACTCAGGGAAGGGC  90
V  92.0% (230/250)  IGHV4-31*03  49   ...............................G.......A.............C..............C.........C...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  V  G  H  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_12354  91   CTGGAGTGGGTCGGGCACATTTATTACAGTGGGACTACCTACTACAACCCGTCCCTCAAGAGTCGAGTTTCCATTTCAGTGGACACGTCT  180
V  92.0% (230/250)  IGHV4-31*03  139  .........A.T...T....C.............GC.................................A....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  F  N  S  V  T  A  A  D  T  A  V  Y  H  C  V  R  G  L  Y  Y  Y  G  S 
                    Query_12354  181  AAGAATCAGTTCTCCCTGAAGTTCAACTCTGTGACTGCCGCGGACACGGCCGTGTATCACTGTGTGAGAGGCCTCTATTACTACGGGTCG  270
V  92.0% (230/250)  IGHV4-31*03  229  .....C...............C.G.G...............................T......C.....--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  87.5% (21/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------........T..T...  16

                                      ----------------->                                  
                                       G  S  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12354  271  GGAAGTTATTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  87.5% (21/24)    IGHD3-10*01  17   ..G......-------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_93160

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ3*01                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATA	CTACAGGTCG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACAGGTCGTGATCCTTTTGATTTC	ARVSREYYDTTGRDPFDF	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12355  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12355  91   AGTGGGTGGCAGTTATTTGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  96.8% (241/249)  IGHV3-33*01  137  ................A.....................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_12355  181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  96.8% (241/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  F  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_12355  271  CTACAGGTCGTGATCCTTTTGATTTCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
J  92.0% (46/50)    IGHJ3*01     1    ----------....G........G...................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_66659

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           330     1e-92
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCAAGTT	TGATAGTCGTGGTTA	CCGCCTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCAAGTTTGATAGTCGTGGTTACCGCCTTTTTGACTAC	ARAKFDSRGYRLFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	229	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  L  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12356  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTCTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (229/247)  IGHV3-48*03  47   ....................................CCT...................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  H  I  S  D  N  D  S  T  K  Y  Y  A  D  S  V  K  G  R  F  S  I  P  S  D  N  A  
                    Query_12356  91   AATGGGTTGCACACATCAGTGATAATGATAGTACCAAATACTACGCAGACTCTGTGAAGGGCCGGTTCTCCATCCCCAGCGACAACGCCA  180
V  92.7% (229/247)  IGHV3-48*03  137  .G......T..T....T...AG..G..G........T...........................A...A.....T....A..........  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  M  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  K  F  D  S  R  G  
                    Query_12356  181  AGAACTCAATGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAGGGCCAAGTTTGATAGTCGTGGTT  270
V  92.7% (229/247)  IGHV3-48*03  227  ........C........................................T.................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.3% (14/15)    IGHD3-22*01  10   ----------------------------------------------------------------------------.......A......  23

                                      ---------------->                                  
                                      Y  R  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12356  271  ACCGCCTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  93.3% (14/15)    IGHD3-22*01  24   .--------------------------------------------------  24
J  100.0% (43/43)   IGHJ4*02     6    --------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_93162

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         349     2e-98
IGHD5-12*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGAGGAT	TGGCTACGA	GACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGACCCCCTTTGACCTT	ARAGRIGYETPFDL	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_12357    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTACTCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  95.1% (235/247)  IGHV4-38-2*02  49   ................................................T.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K 
                    Query_12357    91   GAGTGGATTGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAG  180
V  95.1% (235/247)  IGHV4-38-2*02  139  ......................A.........C.........A..............A........................C.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  Q  F  S  L  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  T 
                    Query_12357    181  AACCAGTTCTCGTTGAATCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGAGCGGGGAGGATTGGCTACGAGACC  270
V  95.1% (235/247)  IGHV4-38-2*02  229  ...........CC....G....G...........C...............G................-----------------------  295
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD5-12*01    11   -----------------------------------------------------------------------------.........----  19

                                        ----------->                                  
                                         P  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12357    271  CCCTTTGACCTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  93.2% (41/44)    IGHJ4*02       5    --.......TAC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_93165

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           310     1e-86
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD3-10*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTCTCGT	TTATTATGGTTCGGGGAGT	CCTCCCCAAG	GACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTCGTTTATTATGGTTCGGGGAGTCCTCCCCAAGGACCAC	ARLSFIMVRGVLPKDH	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	223	25	0	89.9


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  S  G  G  S  V  N  S  G  G  S  *  W  S  W  I  R  K  P  P  G  K  G  
                    Query_12358  4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCGTCAACAGTGGTGGTTCCTAATGGAGCTGGATACGGAAGCCCCCAGGGAAGGGAC  93
V  89.9% (223/248)  IGHV4-61*08  50   .....TCC...A....CA.....................G...........A...C...........C...C..................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  T  G  G  A  N  Y  N  P  S  L  K  S  R  V  S  I  S  I  D  T  S  
                    Query_12358  94   TCGAGTGGATTGGATATATCTATTACACTGGGGGCGCCAACTACAATCCCTCCCTCAAGAGTCGAGTCAGCATATCAATAGACACGTCCG  183
V  89.9% (223/248)  IGHV4-61*08  140  .G...........G.............G....A..A..........C......................C.......G...........A  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      E  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  S  F  I  M  V  R  
                    Query_12358  184  AGAATCAGTTCTCCCTGAAGCTGAGTTCTGTGACAGCTGCGGACACGGCCGTATACTACTGTGCGAGACTCTCGTTTATTATGGTTCGGG  273
V  89.9% (223/248)  IGHV4-61*08  230  ....C....................C........C.................G..T............----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  94.7% (18/19)    IGHD3-10*01  4    ---------------------------------------------------------------------------...C...........  18

                                      T------------------>                                  
                                      G  V  L  P  K  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12358  274  GAGTCCTCCCCAAGGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  94.7% (18/19)    IGHD3-10*01  19   ....--------------------------------------------------  22
J  97.5% (39/40)    IGHJ4*02     9    --------------...T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_93164

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            313     2e-87
IGHD2-2*01                                                                                            16.1    2.3  
IGHJ5*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGTGA	GAGACTGAGT	GTAGTACC	CCCTGGCCCGAAACGAGGTG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGAGAGACTGAGTGTAGTACCCCCTGGCCCGAAACGAGGTGACTGGATCGCCCCC	ASERLSVVPPGPKRGDWIAP	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  D  Y  W  M  S  W  V  S  Q  A  A  G  K  G  L  
                    Query_12359  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACCTTTAGTGACTATTGGATGAGCTGGGTCAGCCAGGCTGCAGGGAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-7*03   47   ................................T...........AG...................C........C...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  M  I  N  E  D  G  R  A  R  F  Y  V  D  S  V  K  G  R  F  I  I  S  R  D  N  A  
                    Query_12359  91   AGTGGTTGGCCATGATAAATGAAGATGGACGTGCGAGATTCTATGTGGACTCTGTGAAGGGCCGATTCATCATTTCCAGAGACAACGCCA  180
V  90.0% (225/250)  IGHV3-7*03   137  .....G......AC.....GC........A...A..A..A.............................C...C................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  F  L  Q  M  Y  S  L  R  V  D  D  T  A  V  Y  Y  C  A  S  E  R  L  S  V  V  P  
                    Query_12359  181  AGAACTCGCTCTTTCTGCAAATGTACAGCCTGAGAGTCGACGACACGGCCGTCTATTATTGTGCGAGTGAGAGACTGAGTGTAGTACCCC  270
V  90.0% (225/250)  IGHV3-7*03   227  .......A..G.A..........A............C...G...........G.....C........A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD2-2*01   12   --------------------------------------------------------------------------------........--  19

                                      R3-IMGT------------------------>                                  
                                      P  G  P  K  R  G  D  W  I  A  P  R  G  P  G  T  L  V  I  V  S  S  
                    Query_12359  271  CTGGCCCGAAACGAGGTGACTGGATCGCCCCCAGGGGCCCGGGGACCCTGGTCATCGTCTCTTCAG  336
J  85.4% (41/48)    IGHJ5*02     4    ------------------.....T...A....T......A...A..........C......C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_93167

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            327     8e-92
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGCCGTC	AGPKYGVFGLAV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	104	10	0	91.2
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12360  1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGCCACCAGGGAAGGGGCTG  90
V  93.0% (226/243)  IGHV4-4*02   49   ...................C........................T..T..........................C...............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  R  S  G 
                    Query_12360  91   GAGTGGATTGGGGAGATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCAAGTCTCGAGTCACCATGTCAGTAGACAGGTCCGGG  180
V  93.0% (226/243)  IGHV4-4*02   139  ..............A....A..A..............A...................AG............A..........A....AA.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  P  M  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_12360  181  AACCAGTTCTCCCCGATGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  93.0% (226/243)  IGHV4-4*02   229  .............T..A.....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  95.7% (44/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12360  271  GCCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  95.7% (44/46)    IGHJ6*02     24   .A.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_93166

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           308     4e-86
IGHD3-16*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	ACTTA	GGGGGAG	ACCAACAATGGGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACTTAGGGGGAGACCAACAATGGGGGGACTACTTTGGCAAC	ANLGGDQQWGDYFGN	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	247	4	4	0	0	100
Total	N/A	N/A	247	222	25	0	89.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  S  T  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_12361  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCGGTAGTACTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  89.9% (222/247)  IGHV4-39*01  49   ..........................................A......G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  N  I  P  D  N  P  S  L  Q  G  R  V  T  T  F  V  D  T  S 
                    Query_12361  91   CTGGAGTGGATCGGCAGTATCCATTATAGTGGCAACATCCCCGACAATCCGTCTCTTCAGGGTCGAGTCACCACATTCGTGGACACGTCA  180
V  89.9% (222/247)  IGHV4-39*01  139  ...........T..G......T..........G.G..C.TA.T....C.....C..CA..A............T..C...A........C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  N  L  G  G  D  Q  Q  W 
                    Query_12361  181  AAGAACCAGTTCTCACTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTATATTACTGTGCGAACTTAGGGGGAGACCAACAATGG  270
V  89.9% (222/247)  IGHV4-39*01  229  ..............C..........G........................T..G.............-----------------------  295
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-16*01  18   ------------------------------------------------------------------------.......-----------  24

                                      ----------------->                                  
                                       G  D  Y  F  G  N  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_12361  271  GGGGACTACTTTGGCAACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  322
J  93.8% (45/48)    IGHJ4*02     1    ----.........A.T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_100221

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           277     1e-76
IGHD2-15*01                                                                                           21.8    0.045
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATAGGC	AGTGGTGGTGGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATAGGCAGTGGTGGTGGCTGCTACTTTGACAAC	ARRLGSGVPCTPFRIGSGGGCYFDN	244	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	213	36	0	85.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  P  G  D  S  I  S  S  D  S  F  Y  W  A  W  I  R  Q  S  P  V  K  G 
                    Query_12362  1    ACCCTGTCCCTCACCTGCACTGTTCCCGGTGATTCCATCAGCAGTGACAGTTTCTACTGGGCCTGGATCCGCCAGTCCCCAGTGAAGGGA  90
V  85.5% (213/249)  IGHV4-39*02  49   .......................CT.T....GC............AGT....A........G.............C......G......G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  M  F  N  G  G  R  T  Y  S  N  P  S  L  K  N  R  V  T  I  S  A  D  T  S 
                    Query_12362  91   CTGGAGTGGATAGGGACTATGTTTAATGGTGGACGCACCTATTCCAACCCGTCCCTCAAGAATCGAGTCACCATATCTGCGGACACGTCC  180
V  85.5% (213/249)  IGHV4-39*02  139  ...........T....G...C.A.T..A....GA.......C.A.................G...............C.TA.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       R  N  H  F  S  L  R  L  T  Y  V  T  S  A  D  S  G  V  Y  Y  C  A  R  R  L  G  S  G  V  P 
                    Query_12362  181  AGGAACCACTTCTCCCTGAGGCTGACCTATGTGACCTCCGCAGACAGCGGTGTCTATTACTGTGCGAGACGTCTTGGGTCCGGTGTCCCC  270
V  85.5% (213/249)  IGHV4-39*02  229  .A.................A.....G..C.......G.........CG.C...G...............---------------------  297
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      ------CDR3-IMGT-------------------------------->                                 
                                       C  T  P  F  R  I  G  S  G  G  G  C  Y  F  D  N  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_12362  271  TGTACTCCCTTCCGCATAGGCAGTGGTGGTGGCTGCTACTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  351
D  92.9% (13/14)    IGHD2-15*01  11   ---------------------.........A....----------------------------------------------  24
J  97.8% (45/46)    IGHJ4*02     2    -----------------------------------..........T...................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_248854

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           366     2e-103
IGHD6-6*01                                                                                            23.8    0.011 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAT	GAGTTTAGCAGCTCG	GCCGAAAACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGTAGAGATATGAGTTTAGCAGCTCGGCCGAAAACTTTTGACTAC	SRDMSLAARPKTFDY	249	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	110	4	0	96.5
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	245	11	0	95.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12363  1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.7% (245/256)  IGHV3-49*04  47   ..................................................G......G................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  G  K  S  Y  D  G  A  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_12363  91   AGTGGGTAGGTTTCATTAGAGGCAAATCTTATGATGGGGCAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  95.7% (245/256)  IGHV3-49*04  137  ....................A.....G......G....A...................................................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------------CDR3
                                      D  P  K  R  I  A  Y  L  Q  M  N  S  L  K  I  E  D  T  A  V  Y  Y  C  S  R  D  M  S  L  A  
                    Query_12363  181  ATCCCAAGCGCATCGCCTATCTGCAAATGAACAGCCTGAAAATCGAGGACACAGCCGTGTATTACTGTAGTAGAGATATGAGTTTAGCAG  270
V  95.7% (245/256)  IGHV3-49*04  227  ..T....AA.................................C..........................C......--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  93.3% (14/15)    IGHD6-6*01   1    -------------------------------------------------------------------------------....A......  11

                                      -IMGT----------------->                                  
                                      A  R  P  K  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12363  271  CTCGGCCGAAAACTTTTGACTACTGGGGCCAGGGAACCTTGGTCACCGTCTCCTCAG  327
D  93.3% (14/15)    IGHD6-6*01   12   ....-----------------------------------------------------  15
J  97.7% (42/43)    IGHJ4*02     6    --------------........................C..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_106008

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD3-22*01                                                                                           44.9    5e-09
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGG	ATTACTTTGATAGTAGTGGTTATTAC	CGGTCGAACTATCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGATTACTTTGATAGTAGTGGTTATTACCGGTCGAACTATCCTTTTGAGAAC	ARGDYFDSSGYYRSNYPFEN	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  A  F  S  S  Y  D  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12364  1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCGCCTTTAGCAGCTATGACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-23*01  47   ........................C..........A...............C.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  R  G  G  S  T  Y  H  A  D  S  V  R  G  R  F  S  I  S  R  D  N  S  
                    Query_12364  91   AGTGGGTCTCCGTTATCAGTGGTAGAGGTGGTAGCACATACCACGCAGACTCCGTGAGGGGCCGGTTCTCCATCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-23*01  137  ..........A.C...T........T...............T...............A..........A.....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  G  D  Y  F  D  S  S  
                    Query_12364  181  AGAACACGCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAGAGGGGATTACTTTGATAGTAGTG  270
V  94.4% (235/249)  IGHV3-23*01  227  ............A.....................................G...............A..---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  96.2% (25/26)    IGHD3-22*01  3    ------------------------------------------------------------------------......A...........  20

                                      R3-IMGT------------------------>                                  
                                      G  Y  Y  R  S  N  Y  P  F  E  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12364  271  GTTATTACCGGTCGAACTATCCTTTTGAGAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  96.2% (25/26)    IGHD3-22*01  21   ........----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    -----------------------.....CT....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_106009

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD7-27*01                                                                                           12.2    37    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGGCCAACCGCCTGGGCGTTAAC	ACTGGG	AC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGCCAACCGCCTGGGCGTTAACACTGGGACCTACTTTGACTCC	ARRANRLGVNTGTYFDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  G  S  G  D  T  F  P  G  Y
                    Query_12365  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGAGACACCTTTCCCGGCTA  90
V  94.8% (275/290)  IGHV5-51*01  6    .............................A...........................................T...G....A..A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  F  P  G  D  S  D  T  K  Y  S  P
                    Query_12365  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAGGGCCTGGAGTGGATGGGGTTCATCTTTCCTGGTGACTCTGATACCAAATACAGCCC  180
V  94.8% (275/290)  IGHV5-51*01  96   .................................A..................A......A....................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  Q  G  Q  V  T  F  S  A  D  K  S  I  G  T  A  Y  L  Q  W  S  R  L  K  A  S  D  T  A
                    Query_12365  181  GGCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCGGCACCGCCTACCTGCAGTGGAGTAGGTTGAAGGCCTCGGACACCGC  270
V  94.8% (275/290)  IGHV5-51*01  186  .T....................A....................A......................C..CC...................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  R  A  N  R  L  G  V  N  T  G  T  Y  F  D  S  W  G  Q  G  T  L  V  S  V
                    Query_12365  271  CATGTATTACTGTGCGAGACGGGCCAACCGCCTGGGCGTTAACACTGGGACCTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCTCCGT  360
V  94.8% (275/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD7-27*01  4    -------------------------------------------......-----------------------------------------  9
J  95.7% (45/47)    IGHJ4*02     2    ---------------------------------------------------...........A......................A....  40

                                              
                                        S  S  
                    Query_12365  361  CTCCTCAG  368
J  95.7% (45/47)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_106007

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           339     2e-95
IGHD3-9*01                                                                                            29.5    2e-04
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGCCAC	GTATAACGATGTTTTGACTGG	CCATAACTAT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGCCACGTATAACGATGTTTTGACTGGCCATAACTATTTCGACCCC	ARGATYNDVLTGHNYFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  L  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12366  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCATTCTCAGTAGTTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-48*03  47   ....................G...............CCT...................C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  V  R  G  T  T  I  Y  Y  A  D  S  V  Q  G  Q  F  T  I  S  R  D  H  A  
                    Query_12366  91   AGTGGGTTTCATACATTAGTGTTAGAGGTACTACCATATACTACGCAGACTCTGTGCAGGGCCAATTTACCATCTCTAGAGACCACGCCA  180
V  93.6% (233/249)  IGHV3-48*03  137  ....................AG...T....G.........................A......G...C........C......A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      T  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  A  T  Y  N  D  V  
                    Query_12366  181  CGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACAGCTGTTTATTACTGTGCGAGAGGAGCCACGTATAACGATGTTT  270
V  93.6% (233/249)  IGHV3-48*03  227  A.............................................G......................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD3-9*01   1    ----------------------------------------------------------------------------....T.....A...  14

                                      IMGT--------------------->                                  
                                      L  T  G  H  N  Y  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12366  271  TGACTGGCCATAACTATTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  90.5% (19/21)    IGHD3-9*01   15   .......-----------------------------------------------------  21
J  100.0% (43/43)   IGHJ5*02     9    -----------------...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_106004

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD3-22*01                                                                                           16.1    2.3   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCAC	ARAPPFDYDLDVRGIHNFDH	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	236	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12367  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (236/244)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_12367  91   TGGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAGC  180
V  96.7% (236/244)  IGHV4-59*01  139  ..........A.................G.............................................A.............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D 
                    Query_12367  181  CAGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGAC  270
V  96.7% (236/244)  IGHV4-59*01  229  ..................AG...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-22*01  6    ----------------------------------------------------------------------------........------  13

                                      GT------------------------>                                  
                                       V  R  G  I  H  N  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12367  271  GTAAGGGGAATCCACAACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  97.8% (44/45)    IGHJ4*02     4    ----------------........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_106005

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           357     1e-100
IGHD1-1*01                                                                                            12.2    32    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTAC	AEEKRRVPRGTFHY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12368  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGC  90
V  95.6% (239/250)  IGHV3-23*01  47   ................................T.........G..G...........................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  A  I  S  G  G  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  S  S  
                    Query_12368  91   AGTGGGTCTCAGCCATTAGTGGTGGTGGTGGTACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAGTTCGA  180
V  95.6% (239/250)  IGHV3-23*01  137  .............T.........A.........G............................................G.....A...C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  
                    Query_12368  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGG  270
V  95.6% (239/250)  IGHV3-23*01  227  .................................................................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------------------------......------------  17

                                      ------------->                                  
                                      G  T  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12368  271  GAACCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (43/44)    IGHJ4*02     5    ----....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_106003

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           268     6e-74
IGHD2-2*01                                                                                            12.2    30   
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GGGCCAGAGA	AGTAGGACC	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGAGGGCCAGAGAAGTAGGACCCTTGACTAC	ATEGQRSRTLDY	234	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	10	1	0	90.9
CDR1-IMGT	24	47	24	19	5	0	79.2
FR2-IMGT	48	98	51	47	4	0	92.2
CDR2-IMGT	99	119	21	17	4	0	81
FR3-IMGT	120	233	114	100	14	0	87.7
CDR3-IMGT (germline)	234	241	8	7	1	0	87.5
Total	N/A	N/A	229	200	29	0	87.3


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  S  N  N  Y  M  S  W  V  R  Q  A  P  G  M  G  L  E  W  V  S  L  I  
                    Query_12369  13   GTACAGCCTCTGGATTCACCTTCAGTAATAACTATATGAGTTGGGTCCGCCAGGCTCCAGGGATGGGGCTGGAGTGGGTCTCTCTTATTT  102
V  87.3% (200/229)  IGHV3-53*01  65   ..G..........G......G......GC.....C.....C......................A..................AG......  154
                                         A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  

                                      --CDR2-IMGT-----><----------------------------------------------------FR3-IMGT------------
                                      Y  S  G  G  G  S  F  Y  T  H  S  V  E  G  R  F  T  I  S  R  D  D  Y  K  N  T  V  Y  L  Q  
                    Query_12369  103  ACAGCGGTGGTGGCTCCTTCTACACACACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACGATTACAAGAACACGGTTTATCTTCAAA  192
V  87.3% (200/229)  IGHV3-53*01  155  .T.........A..A.A.A....G..G........A..........................A...C..........C.G..........  244
                                      Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  

                                      ----------------------------------------><-------------CDR3-IMGT------------>             
                                      M  N  N  V  R  A  E  D  T  A  I  Y  Y  C  A  T  E  G  Q  R  S  R  T  L  D  Y  W  G  Q  G  
                    Query_12369  193  TGAACAATGTTAGAGCCGAGGACACGGCCATATATTACTGTGCGACAGAGGGCCAGAGAAGTAGGACCCTTGACTACTGGGGCCAGGGAA  282
V  87.3% (200/229)  IGHV3-53*01  245  ......GCC.G..................G.G.............G...-----------------------------------------  293
                                      M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                            
D  88.9% (8/9)      IGHD2-2*01   11   -----------------------------------------------------------.....T...----------------------  19
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------------------------.....................  27

                                                           
                                      T  L  V  I  V  S  S  
                    Query_12369  283  CCCTGGTCATCGTCTCCTCAG  303
J  97.6% (41/42)    IGHJ4*02     28   .........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_106000

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD3-16*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	TGGGGGA	TGGCGACAATTCTGACATTTCG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTC	TRVGDGDNSDISYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	276	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  T  Y
                    Query_12370  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTTCCACTTA  90
V  95.5% (276/289)  IGHV5-51*01  6    ..................................................................................A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  S  P
                    Query_12370  91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACAGTCC  180
V  95.5% (276/289)  IGHV5-51*01  96   C.......G.................................................T.................A..........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12370  181  GTCCTTCCAAGGCCAGGTCTCCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTTTGAAGGCCTCGGACACCGC  270
V  95.5% (276/289)  IGHV5-51*01  186  ...................A.................................................CC...................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  T  R  V  G  D  G  D  N  S  D  I  S  Y  G  M  D  V  W  G  Q  G  T  K  V  T  V
                    Query_12370  271  CATCTATTACTGTACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTCTGGGGCCAAGGGACCAAGGTCACCGT  360
V  95.5% (276/289)  IGHV5-51*01  276  ...G.........G.....-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-16*01  17   --------------------.......---------------------------------------------------------------  23
J  95.8% (46/48)    IGHJ6*02     15   -------------------------------------------------.....T.........................C.........  55

                                             
                                        S  S 
                    Query_12370  361  CTCCTCA  367
J  95.8% (46/48)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_42058

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            341     5e-96
IGHD5-18*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGGGGGGACTACC	GATACAG	GGTTGGCTG	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGGGGGACTACCGATACAGGGTTGGCTGTTGATTAC	ARDQGGTTDTGLAVDY	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  R  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_12371  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGCAGGAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  94.0% (233/248)  IGHV4-4*02   49   ............................................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  Y  H  S  G  T  A  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  K  S  K 
                    Query_12371  91   GAGTGGATTGGAGAAGTCTATCATAGTGGGACTGCCAACTACAACCCGTCCCTCAAGAGCCGACTCACCATATCAGTGGACAAGTCCAAG  180
V  94.0% (233/248)  IGHV4-4*02   139  ...........G...A...............GCA.........................T...G.............A............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  Q  G  G  T  T  D  T 
                    Query_12371  181  AACCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCATCTATTACTGTGCGAGAGATCAGGGGGGGACTACCGATACA  270
V  94.0% (233/248)  IGHV4-4*02   229  .................G....G.........................G.G.................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD5-18*01  4    ------------------------------------------------------------------------------------......  9

                                      ----------------->                                  
                                       G  L  A  V  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_12371  271  GGGTTGGCTGTTGATTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  322
D  100.0% (7/7)     IGHD5-18*01  10   .---------------------------------------------------  10
J  95.2% (40/42)    IGHJ4*02     7    ----------....C.........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_18198

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         294     7e-82
IGHD2-15*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GGGGAGGGCTGTCGCGCTT	TTGTAGTGCTGGT	TCCTGCGAGCTCTC	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGGGGGAGGGCTGTCGCGCTTTTGTAGTGCTGGTTCCTGCGAGCTCTCCGGTATGGACGTC	ATGGGLSRFCSAGSCELSGMDV	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  S  V  S  G  G  S  I  T  S  G  A  S  Y  W  S  W  I  R  Q  P  P  G  K  V 
                    Query_12372    1    ACCCTATCCCTCACCTGCTCTGTCTCTGGTGGCTCCATTACCAGTGGGGCTTCCTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGTC  90
V  87.6% (219/250)  IGHV4-30-4*01  49   .....G............A...................C.G......T.A..A...................................G.  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  C  I  G  N  I  H  H  S  G  N  T  Y  Y  N  P  S  L  N  S  R  I  T  I  S  I  D  R  S 
                    Query_12372    91   CTGGAGTGTATTGGGAACATCCATCACAGCGGGAACACCTACTACAACCCGTCCCTCAACAGTCGGATTACCATATCCATAGATAGGTCC  180
V  87.6% (219/250)  IGHV4-30-4*01  139  ........G......T.....T..T....T....G........................G.....AG..........AG....C.C....  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------------
                                         K  N  Q  V  S  L  N  L  N  S  A  T  V  A  D  T  A  V  Y  Y  C  A  T  G  G  G  L  S  R  F 
                    Query_12372    181  AAAAACCAGGTCTCCCTGAACCTGAACTCTGCAACAGTCGCGGACACGGCCGTGTATTACTGTGCCACAGGGGGAGGGCTGTCGCGCTTT  270
V  87.6% (219/250)  IGHV4-30-4*01  229  ..G......T..........G....G.....TG..T.C...A.........................G..--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD2-15*01    7    -----------------------------------------------------------------------------------------.  7

                                        --CDR3-IMGT--------------------------->                                 
                                         C  S  A  G  S  C  E  L  S  G  M  D  V  W  G  Q  G  T  A  V  A  V  S  S 
                    Query_12372    271  TGTAGTGCTGGTTCCTGCGAGCTCTCCGGTATGGACGTCTGGGGCCAAGGGACCGCGGTCGCCGTCTCCTCA  342
D  92.3% (12/13)    IGHD2-15*01    8    .......G....------------------------------------------------------------  19
J  95.7% (44/46)    IGHJ6*02       17   --------------------------............................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_18195

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           313     1e-87
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCGCCGGGACG	GTGGTAATTAC	CCTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCGCCGGGACGGTGGTAATTACCCTATTGACTAC	ARPRRDGGNYPIDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	224	24	0	90.3


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  R  T  D  G  Y  Y  W  G  W  I  R  Q  F  P  G  K  G  
                    Query_12373  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGAACTGATGGTTACTACTGGGGCTGGATCCGCCAGTTCCCAGGGAAGGGCC  93
V  90.3% (224/248)  IGHV4-31*03  50   .....TCC...A............................C.G..G.............A..............CA..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  F  I  Y  H  T  G  S  T  Y  Y  T  P  S  V  R  G  R  V  T  M  S  V  D  T  S  
                    Query_12373  94   TGGAGTGGATTGGGTTCATCTATCACACTGGGAGCACCTACTACACCCCGTCCGTCCGGGGTCGAGTCACCATGTCAGTGGACACGTCTA  183
V  90.3% (224/248)  IGHV4-31*03  140  ...............A.......T...G.................A.......C..AA.A.......T.....A.....A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  R  R  D  G  G  N  
                    Query_12373  184  AGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGACCTCGCCGGGACGGTGGTAATT  273
V  90.3% (224/248)  IGHV4-31*03  230  ..................A.....G...........................G...............----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD3-22*01  18   ---------------------------------------------------------------------------------.....T...  26

                                      ------------->                                  
                                      Y  P  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12373  274  ACCCTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  90.9% (10/11)    IGHD3-22*01  27   ..----------------------------------------------  28
J  100.0% (42/42)   IGHJ4*02     7    ------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_18197

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           310     1e-86
IGHD6-6*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTAAA	AGACTGGG	GTATACCAATTCGTCC	GGGCCGA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTAAAAGACTGGGGTATACCAATTCGTCCGGGCCGAACTTTGAGTAC	VKRLGYTNSSGPNFEY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	248	6	4	2	0	66.7
Total	N/A	N/A	248	223	25	0	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  T  F  G  M  H  W  V  R  Q  A  P  G  Q  G  L  
                    Query_12374  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCTCTACCTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCCAGGGGCTGG  90
V  89.9% (223/248)  IGHV3-30*18  47   ....................................C....AG..G..A...............................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  H  D  G  S  N  K  F  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12374  91   AGTGGGTGGCAGTTATATCACATGATGGAAGTAATAAATTCTATGGGGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  89.9% (223/248)  IGHV3-30*18  137  ....................T..................A.....CA.................A.....................T...  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  V  F  L  H  M  K  S  L  R  S  D  D  T  A  V  Y  S  C  V  K  R  L  G  Y  T  N  S  
                    Query_12374  181  AGAACACGGTCTTTCTGCATATGAAGAGCCTGAGAAGCGATGACACGGCTGTATATTCCTGTGTTAAAAGACTGGGGTATACCAATTCGT  270
V  89.9% (223/248)  IGHV3-30*18  227  ........C.G.A......A.....C.........GCT..G...........G....A.....CG...----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  81.2% (13/16)    IGHD6-6*01   3    ----------------------------------------------------------------------------.....G..GC....  16

                                      T------------------>                                  
                                      S  G  P  N  F  E  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_12374  271  CCGGGCCGAACTTTGAGTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  324
D  81.2% (13/16)    IGHD6-6*01   17   ..----------------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    ---------.......C........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_18196

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           349     3e-98
IGHD3-16*01                                                                                           18.0    0.64 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	278	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	277	114	95	13	6	83.3
CDR3-IMGT (germline)	278	283	6	6	0	0	100
Total	N/A	N/A	289	258	25	6	89.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P  R  Y
                    Query_12375  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCCGTTA  90
V  89.3% (258/289)  IGHV5-51*03  6    .......................................................T.....A....T..........GC..TA..A.C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_12375  91   TTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGTCC  180
V  89.3% (258/289)  IGHV5-51*03  96   C........C.......................................................G.....................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D  T  A
                    Query_12375  181  GGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACACTGC  264
V  89.3% (258/289)  IGHV5-51*03  186  .T.....C.A...................C...C........CAGCACC.C...............C..C.................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12375  265  CATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  353
V  89.3% (258/289)  IGHV5-51*03  276  ...G........T......----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD3-16*01  18   --------------------........T...---------------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    ---------------------------------------......T......G.................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_18190

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            335     4e-94
IGHD3-22*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAGG	ATTACTTTGATAGGAGT	CGTCACGACGAATT	CGGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCAGGATTACTTTGATAGGAGTCGTCACGACGAATTCGGTCTGGACGTC	ARDQDYFDRSRHDEFGLDV	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  D  S  F  S  G  D  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12376  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCTTCAGTGGCGATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.1% (231/248)  IGHV4-4*02   49   ...............................G....A....CA.TAG...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  A  I  I  S  I  D  K  S  N 
                    Query_12376  91   GAGTGGATTGGGGAAGTCTATGATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGCCATCATATCAATAGACAAGTCCAAC  180
V  93.1% (231/248)  IGHV4-4*02   139  ...............A.....C..........................................T..C.......G.............G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       K  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  D  Y  F  D  R  S 
                    Query_12376  181  AAACAGTTCTCCCTAAAACTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGACCAGGATTACTTTGATAGGAGT  270
V  93.1% (231/248)  IGHV4-4*02   229  ..C...........G..G....G.............................................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  88.2% (15/17)    IGHD3-22*01  3    -------------------------------------------------------------------------......A......T...  19

                                      MGT----------------------->                                 
                                       R  H  D  E  F  G  L  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_12376  271  CGTCACGACGAATTCGGTCTGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  330
J  95.7% (44/46)    IGHJ6*02     17   --------------....A.......................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_18193

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            353     9e-100
IGHD2-8*02                                                                                            19.9    0.15  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AAAGCGGGCTC	TACTGGTGGT	A	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAAAGCGGGCTCTACTGGTGGTAACTTTGACTAC	ARKAGSTGGNFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  T  H  Y  W  M  S  W  V  R  Q  A  P  G  K  W  L  
                    Query_12377  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTTACTCACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGTGGCTGG  90
V  95.6% (237/248)  IGHV3-7*03   47   ....................................CC....G.AG.....................................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  D  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12377  91   AGTGGGTTGCCGACATAAAGCAGGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (237/248)  IGHV3-7*03   137  .......G...A..........A...................................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  K  A  G  S  T  G  G  
                    Query_12377  181  AGAACTCAGTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAAAAGCGGGCTCTACTGGTGGTA  270
V  95.6% (237/248)  IGHV3-7*03   227  ........C.G.........................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD2-8*02   10   -------------------------------------------------------------------------------..........-  19

                                      ---------->                                  
                                      N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12377  271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (45/45)   IGHJ4*02     4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_1824

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ3*01                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTTCGCGCGAG	TACTATGATA	CTACAGGTCG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTCGCGCGAGTACTATGATACTACAGGTCGTGATCCTTTTGATTTC	ARASREYYDTTGRDPFDF	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12378  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12378  91   AGTGGGTGGCAGTTATTTGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  96.8% (241/249)  IGHV3-33*01  137  ................A.....................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  A  S  R  E  Y  Y  D  
                    Query_12378  181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGCTTCGCGCGAGTACTATGATA  270
V  96.8% (241/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  F  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_12378  271  CTACAGGTCGTGATCCTTTTGATTTCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
J  92.0% (46/50)    IGHJ3*01     1    ----------....G........G...................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_326740

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           266     2e-73
IGHD2-21*01                                                                                           19.9    0.16 
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-21*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTGTTCCAAT	TGGTGGTTATTGGTAT	CCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTGTTCCAATTGGTGGTTATTGGTATCCCTTCGATCCC	ARDRVPIGGYWYPFDP	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	11	0	0	100
CDR1-IMGT	19	42	24	19	5	0	79.2
FR2-IMGT	43	93	51	51	0	0	100
CDR2-IMGT	94	117	24	16	8	0	66.7
FR3-IMGT	118	243	126	104	10	12	82.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	244	209	23	12	85.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  T  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_12379  8    GTGCAGCCTCTGGATTCACTTTCAGTACTTATAGTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATTG  97
V  85.7% (209/244)  IGHV3-30*04  65   ...................C.......GC...GC......................................................AT  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------------FR3-IMGT---
                                      A  Y  D  G  N  T  Y  Y  A  D  S  Y  Y  A  D  S  V  K  G  R  F  T  I  P  R  D  N  S  R  D  
                    Query_12379  98   CATATGATGGCAATACATACTACGCAGACTCCTACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCCCCAGAGACAATTCCAGGGACA  187
V  85.7% (209/244)  IGHV3-30*04  155  ..........A.G..ATA.A...------------.......................A.........T...............A.A...  232
                                      S  Y  D  G  S  N  K  Y              Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  

                                      -------------------------------------------------------><-------------------CDR3-IMGT-----
                                      T  L  Y  L  Q  M  N  R  L  R  P  E  D  T  A  V  Y  Y  C  A  R  D  R  V  P  I  G  G  Y  W  
                    Query_12379  188  CCCTCTATCTGCAAATGAACCGCCTGAGACCTGAGGACACCGCTGTCTATTACTGTGCGAGAGATCGTGTTCCAATTGGTGGTTATTGGT  277
V  85.7% (209/244)  IGHV3-30*04  233  .G..G...............A........G..........G.....G.................--------------------------  296
                                      T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                             
D  87.5% (14/16)    IGHD2-21*01  10   ----------------------------------------------------------------------------.......G....C.  23

                                      ------------->                                  
                                      Y  P  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12379  278  ATCCCTTCGATCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  87.5% (14/16)    IGHD2-21*01  24   ..----------------------------------------------  25
J  97.7% (42/43)    IGHJ5*02     9    -----.....C.....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_326743

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           350     9e-99
IGHD3-16*01                                                                                           18.0    0.65 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	286	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	70	5	0	93.3
CDR1-IMGT	79	102	24	17	7	0	70.8
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	285	114	95	13	6	83.3
CDR3-IMGT (germline)	286	291	6	6	0	0	100
Total	N/A	N/A	294	261	27	6	88.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P 
                    Query_12380  4    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCC  93
V  88.8% (261/294)  IGHV5-51*03  1    .....G........G.............................................T.....A....T..........GC..TA..  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y 
                    Query_12380  94   CGTTATTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATAC  183
V  88.8% (261/294)  IGHV5-51*03  91   A.C..C........C.......................................................G...................  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D 
                    Query_12380  184  AGTCCGGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGAC  267
V  88.8% (261/294)  IGHV5-51*03  181  ..C...T.....C.A...................C...C........CAGCACC.C...............C..C...............  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S 
                    Query_12380  268  ACTGCCATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCT  357
V  88.8% (261/294)  IGHV5-51*03  271  ..C.....G........T......------------------------------------------------------------------  294
                                       T  A  M  Y  Y  C  A  R                                                                   
D  91.7% (11/12)    IGHD3-16*01  18   -------------------------........T...-----------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    --------------------------------------------......T......G.................A..............  46

                                          
                                       S  
                    Query_12380  358  TCAG  361
J  94.0% (47/50)    IGHJ3*01     47   ....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_1827

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           339     2e-95
IGHD1-26*01                                                                                           19.9    0.16 
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAATATTGTCA	TGGGAGCTAC	GCCG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAATATTGTCATGGGAGCTACGCCGTGATGTTTTTGATATC	ARGILSWELRRDVFDI	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  Y  T  F  S  G  F  S  I  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12381  1    GGTCCCTGAGACTCTCCTGTGCTGCCTCTGGATACACATTCAGTGGTTTTAGCATCAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-21*01  47   ......................A..........T...C......A.C.A......G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  G  S  D  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_12381  91   AGTGGGTCTCATCCATTAGTGGTGGTAGTGATTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  93.9% (232/247)  IGHV3-21*01  137  ....................A..A.....AG........................................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  I  L  S  W  E  L  
                    Query_12381  181  AGAACTCATTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGGGGAATATTGTCATGGGAGCTAC  270
V  93.9% (232/247)  IGHV3-21*01  227  ........C.G.........................................G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD1-26*01  8    --------------------------------------------------------------------------------..........  17

                                      T------------------>                                  
                                      R  R  D  V  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12381  271  GCCGTGATGTTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
J  98.0% (49/50)    IGHJ3*02     1    ----.....C............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_92412

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           344     6e-97
IGHD2-21*01                                                                                           12.2    32   
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	CGGCCCCCGAATCCA	CATATT	CTTCGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGCGGCCCCCGAATCCACATATTCTTCGGACTGGTTCGACCCC	ATAAPESTYSSDWFDP	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12382  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.0% (235/250)  IGHV4-31*03  49   ...................C..........................................C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  L  Y  D  S  G  S  N  Y  Y  K  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12382  91   CTGGAGTGGATTGGCTACCTCTATGACAGTGGGAGCAACTACTACAAACCGTCCCTCAAGAGCCGAGTTACCATATCAGTAGACACGTCT  180
V  94.0% (235/250)  IGHV4-31*03  139  ..............G...A.....T............C.........C..............T...........................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  S  S  L  N  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  A  A  P  E  S  T  Y 
                    Query_12382  181  AAGAACCAGTCCTCCCTGAACCTGACCTCTGTCACTGCCGCGGACACGGCCGTCTATTATTGTGCGACAGCGGCCCCCGAATCCACATAT  270
V  94.0% (235/250)  IGHV4-31*03  229  ..........T.........G....G......G....................G.....C.......G..--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-21*01  3    -------------------------------------------------------------------------------------.....  7

                                      GT------------------>                                  
                                       S  S  D  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12382  271  TCTTCGGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  325
D  100.0% (6/6)     IGHD2-21*01  8    .------------------------------------------------------  8
J  97.9% (47/48)    IGHJ5*02     4    -------..................................C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_326744

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD3-22*01                                                                                           44.9    5e-09
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGG	ATTACTTTGATAGTAGTGGTTATTAC	CGGTCGAACTATCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGATTACTTTGATAGTAGTGGTTATTACCGGTCGAACTATCCTTTTGAGTAC	ARGDYFDSSGYYRSNYPFEY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  A  F  S  S  Y  D  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12383  1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCGCCTTTAGCAGCTATGACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-23*01  47   ........................C..........A...............C.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  R  G  G  S  T  Y  H  A  D  S  V  R  G  R  F  S  I  S  R  D  N  S  
                    Query_12383  91   AGTGGGTCTCCGTTATCAGTGGTAGAGGTGGTAGCACATACCACGCAGACTCCGTGAGGGGCCGGTTCTCCATCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-23*01  137  ..........A.C...T........T...............T...............A..........A.....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  G  D  Y  F  D  S  S  
                    Query_12383  181  AGAACACGCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAGAGGGGATTACTTTGATAGTAGTG  270
V  94.4% (235/249)  IGHV3-23*01  227  ............A.....................................G...............A..---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  96.2% (25/26)    IGHD3-22*01  3    ------------------------------------------------------------------------......A...........  20

                                      R3-IMGT------------------------>                                  
                                      G  Y  Y  R  S  N  Y  P  F  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12383  271  GTTATTACCGGTCGAACTATCCTTTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  96.2% (25/26)    IGHD3-22*01  21   ........----------------------------------------------------------  28
J  97.7% (42/43)    IGHJ4*02     6    -----------------------.....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_92410

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            294     6e-82
IGHD1-26*01                                                                                           10.3    118  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAACTTTCGCGACATAT	GAGCT	CCA	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAACTTTCGCGACATATGAGCTCCATATGGACGTC	AKTFATYELHMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	98	16	0	86
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	216	28	0	88.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  H  N  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_12384  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTCATAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGTAAGGGCCTG  90
V  88.5% (216/244)  IGHV4-4*02   49   ..................G.................A........AG...........G.....................G.....G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  N  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  M  S  M  A  K  L  K 
                    Query_12384  91   GAGTGGATTGGAGAAATCTATCATAACGGCAACACCAACTACAACCCGTCCCTCCAGAGTCGGGTCACCATGTCAATGGCCAAGTTGAAG  180
V  88.5% (216/244)  IGHV4-4*02   139  ...........G.............GT..G.G......................A.......A........A...G.A.A.....CC...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  F  F  L  K  L  N  D  A  T  A  A  D  T  A  V  Y  Y  C  A  K  T  F  A  T  Y  E  L  H 
                    Query_12384  181  AATCAGTTCTTCCTGAAACTGAACGATGCGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAAAACTTTCGCGACATATGAGCTCCAT  270
V  88.5% (216/244)  IGHV4-4*02   229  ..C.......C......G....G.TC..T.....................G.............--------------------------  292
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (5/5)     IGHD1-26*01  11   ---------------------------------------------------------------------------------.....----  15
J  97.7% (42/43)    IGHJ6*02     20   -----------------------------------------------------------------------------------------.  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_12384  271  ATGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  312
J  97.7% (42/43)    IGHJ6*02     21   ...............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_326746

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           279     3e-77
IGHD6-25*01                                                                                           14.1    9.1  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGCAGTGCAATGTTCCAAGGTTCGC	CAGCGGC	AGGCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCGCAGTGCAATGTTCCAAGGTTCGCCAGCGGCAGGCAACTACTACTCCTACGGGATGGACGTC	AKDRSAMFQGSPAAGNYYSYGMDV	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	25	4	0	86.2
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	214	36	0	85.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  F  S  C  E  T  S  G  F  T  F  T  A  H  G  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12385  1    GGTCCCTGAGATTCTCCTGTGAAACTTCTGGATTCACCTTCACCGCCCACGGCTTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  85.6% (214/250)  IGHV3-30*18  47   ...........C.........C.G.C................GTAG.T.T...A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  L  S  F  D  G  Y  G  R  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_12385  91   AGTGGGTGGCCCTTTTGTCGTTTGATGGATATGGAAGATTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCA  180
V  85.6% (214/250)  IGHV3-30*18  137  ..........AG..A.A..A.A.......AG.AAT.A..A...........................................A.T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  K  T  L  Y  L  Q  M  D  S  L  R  P  E  D  T  G  F  Y  F  C  A  K  D  R  S  A  M  F  Q  
                    Query_12385  181  AGAAGACACTGTATCTGCAAATGGACAGCCTGCGACCTGAGGACACGGGTTTTTACTTCTGTGCGAAAGACCGCAGTGCAATGTTCCAAG  270
V  85.6% (214/250)  IGHV3-30*18  227  ....C..G...............A........A..G............C.G.G..T.A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      ----CDR3-IMGT------------------------------>                                 
                                      G  S  P  A  A  G  N  Y  Y  S  Y  G  M  D  V  W  G  P  G  T  T  V  T  V  S  S 
                    Query_12385  271  GTTCGCCAGCGGCAGGCAACTACTACTCCTACGGGATGGACGTCTGGGGCCCAGGGACCACGGTCACCGTCTCTTCA  347
D  100.0% (7/7)     IGHD6-25*01  9    ------.......----------------------------------------------------------------  15
J  93.2% (55/59)    IGHJ6*02     4    ------------------.........A......T................A.....................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_326748

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD2-15*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAGCGTT	AGGACATTGT	GTTAGAAGCACTTGCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGCGTTAGGACATTGTGTTAGAAGCACTTGCGACTACGGTATGGACGTC	RQR*DIVLEALATTVWTS	282	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	68	64	62	1	1	96.9
CDR1-IMGT	69	92	24	23	1	0	95.8
FR2-IMGT	93	143	51	51	0	0	100
CDR2-IMGT	144	167	24	23	1	0	95.8
FR3-IMGT	168	281	114	109	5	0	95.6
CDR3-IMGT (germline)	282	285	4	4	0	0	100
Total	N/A	N/A	281	272	8	1	96.8


Alignments

                                      <---------------------------FR1-IMGT---------------------------><-------CDR1-IMGT------><-
                                        V  Q   L  V  Q  R  *  K  S  P  G  S  L  *  R  S  P  V  R  V  L  D  T  A  L  P  T  T  G  
                    Query_12386  6    GGTGCAG-CTGGTGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTACTGGAT  94
V  96.8% (272/281)  IGHV5-51*01  12   .......T....A...................................................................G.........  101
                                        V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W  I

                                      -------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------------
                                      S  A  G  C  A  R  C  P  G  K  A  W  S  G  W  G  S  S  I  L  V  T  L  I  P  D  T  V  R  L  
                    Query_12386  95   CGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCCATCCTGGTGACTCTGATACCAGATACAGTCCGTCTTT  184
V  96.8% (272/281)  IGHV5-51*01  102  ....................................................T............................C.....C..  191
                                        G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S  F

                                      ------------------------------------FR3-IMGT----------------------------------------------
                                      S  K  A  R  S  P  S  Q  P  T  S  P  S  V  P  P  T  G  S  G  V  A  *  R  P  R  T  P  P  C  
                    Query_12386  185  CCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCGGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGCCATGTA  274
V  96.8% (272/281)  IGHV5-51*01  192  .......................................C..........T.........C.............................  281
                                        Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M  Y

                                      ------><----------------------CDR3-IMGT--------------------->                             
                                      I  T  V  R  Q  R  *  D  I  V  L  E  A  L  A  T  T  V  W  T  S  G  A  K  G  P  R  S  P  S  
                    Query_12386  275  TTACTGTGCGACAGCGTTAGGACATTGTGTTAGAAGCACTTGCGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  364
V  96.8% (272/281)  IGHV5-51*01  282  ...........-------------------------------------------------------------------------------  292
                                        Y  C  A                                                                                 
D  90.0% (9/10)     IGHD2-15*01  1    ------------------....T.....--------------------------------------------------------------  10
J  100.0% (50/50)   IGHJ6*02     13   --------------------------------------------..............................................  58

                                          
                                      P   
                    Query_12386  365  CTCA  368
J  100.0% (50/50)   IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_1828

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD1-1*01                                                                                            14.1    7.9  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_12387  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_12387  91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_12387  181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_12387  271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_1829

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           364     6e-103
IGHD2-15*01                                                                                           14.1    9.9   
IGHJ6*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGGGCTGCATC	TTGTAGCGGT	TCCAATTGCTACGACTTAGG	CGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGCTGCATCTTGTAGCGGTTCCAATTGCTACGACTTAGGCGGAATGGACGTC	ARRAASCSGSNCYDLGGMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	261	28	0	90.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  L  G  S  G  Y  S  F  V  K  Y
                    Query_12388  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCTGGGTTCTGGATACAGCTTTGTCAAATA  90
V  90.3% (261/289)  IGHV5-51*03  6    ..............................A..............................AA...................AC..GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  T  P  G  K  G  L  E  W  M  G  T  I  Y  P  S  D  S  D  T  R  Y  S  P
                    Query_12388  91   TTGGATTGCTTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGGACCATCTATCCGTCTGACTCTGATACCCGATACAGCCC  180
V  90.3% (261/289)  IGHV5-51*03  96   C.....C.GC.............T.............................T.........TGG.............A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  L  S  T  A  F  L  Q  W  S  S  L  G  V  S  D  S  A
                    Query_12388  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTCTCTCCACCGCCTTCCTGCAGTGGAGCAGCCTGGGGGTCTCGGACAGCGC  270
V  90.3% (261/289)  IGHV5-51*03  186  .............................C.........CA..AG........A...................AA..C........C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        I  Y  Y  C  A  R  R  A  A  S  C  S  G  S  N  C  Y  D  L  G  G  M  D  V  W  G  R  G  T  T
                    Query_12388  271  CATTTATTACTGTGCGAGACGGGCTGCATCTTGTAGCGGTTCCAATTGCTACGACTTAGGCGGAATGGACGTCTGGGGCCGAGGGACCAC  360
V  90.3% (261/289)  IGHV5-51*03  276  ...G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  90.0% (9/10)     IGHD2-15*01  7    ------------------------------......T...--------------------------------------------------  16
J  93.5% (43/46)    IGHJ6*02     17   ------------------------------------------------------------...T................A.........  46

                                                      
                                        V  I  V  S  S 
                    Query_12388  361  GGTCATCGTCTCCTCA  376
J  93.5% (43/46)    IGHJ6*02     47   .....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_204660

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           366     2e-103
IGHD6-19*01                                                                                           16.1    2.2   
IGHJ3*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAGGAGGGGGG	TAGCAGTG	CCGGC	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAGGAGGGGGGTAGCAGTGCCGGCGCTTTTGATATC	ARDKEGGSSAGAFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12389  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-21*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  S  S  S  D  Y  I  S  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12389  91   AGTGGGTCTCATCCATTACTAGTAGTAGTGATTACATATCCTACGCAGCCTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (242/250)  IGHV3-21*01  137  ..................G..........AG........A........A.........................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  K  E  G  G  S  S  
                    Query_12389  181  AGAACTCACTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATAAGGAGGGGGGTAGCAGTG  270
V  96.8% (242/250)  IGHV3-21*01  227  ..........G...........................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  6    ----------------------------------------------------------------------------------........  13

                                      ---------------->                                  
                                      A  G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12389  271  CCGGCGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  100.0% (46/46)   IGHJ3*02     5    -----..............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_62824

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCT	CTATGATAGTAATGG	CG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATGATAGTAATGGCGACAACTGGTTCGCCCCC	ARGLYDSNGDNWFAP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  R  Y  R  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_12390  1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACTTTCAGTAGATATAGGATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-21*01  47   ........................C............C........C.....C....AC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  S  I  S  T  G  S  S  D  I  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12390  91   TGTGGGTCTCTTCCATTAGTACTGGTAGCAGTGACATATTCTACGCAGACTCGGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.8% (231/249)  IGHV3-21*01  137  A.........A..........G.A....T...T......A............A.....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  D  D  T  A  I  Y  Y  C  A  R  G  L  Y  D  S  N  G  
                    Query_12390  181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTATTTATTACTGTGCGAGAGGCCTCTATGATAGTAATGGCG  270
V  92.8% (231/249)  IGHV3-21*01  227  ............A...........................G.........G.G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD3-22*01  7    -------------------------------------------------------------------------...........G...--  21

                                      ---------------->                                  
                                      D  N  W  F  A  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_12390  271  ACAACTGGTTCGCCCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  321
J  96.1% (49/51)    IGHJ5*02     1    ............A..........................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_62825

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           263     2e-72
IGHD3-16*01                                                                                           12.2    33   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GATCTCCCATTG	TTATGA	GCGGGGCACGGTTTTCGAGTCGGGCTCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTCCCATTGTTATGAGCGGGGCACGGTTTTCGAGTCGGGCTCCCCTTGACCAC	ARSPIVMSGARFSSRAPLDH	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	94	20	0	82.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	207	39	0	84.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  K  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12391  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGTTTCACCTTCACCAAACATGCCCTGAGTTGGGTCCGACAGGCTCCAGGGAAGGGACTAC  90
V  84.1% (207/246)  IGHV3-23*01  47   ...............................A........T.G..GCT.....A....C........C.................G..GG  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  T  I  S  G  D  G  R  A  T  S  T  L  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12391  91   AGTGGGTCTCAACTATTAGTGGTGATGGTCGTGCCACGTCCACCTTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  84.1% (207/246)  IGHV3-23*01  137  ...........G...........AG....G..AG...A.A.TA.GC............................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      I  N  T  L  F  L  Q  L  T  S  L  R  V  D  D  S  A  L  Y  Y  C  A  R  S  P  I  V  M  S  G  
                    Query_12391  181  TCAACACTTTATTTCTGCAACTGACCAGCCTGAGAGTCGACGACTCGGCCCTCTACTATTGTGCGAGATCTCCCATTGTTATGAGCGGGG  270
V  84.1% (207/246)  IGHV3-23*01  227  AG.....GC.G.A.......A...A...........C...G...A.....G.A..T..C.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-16*01  4    ------------------------------------------------------------------------------......------  9

                                      R3-IMGT------------------------>                                  
                                      A  R  F  S  S  R  A  P  L  D  H  W  G  Q  G  T  L  V  T  V  T  S  
                    Query_12391  271  CACGGTTTTCGAGTCGGGCTCCCCTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCACTTCAG  336
J  92.9% (39/42)    IGHJ4*02     7    ------------------------.....T.............................T.C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_62826

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*13                                                                                           375     3e-106
IGHD1-26*01                                                                                           10.3    133   
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*13	IGHD1-26*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACGG	GTTCTTTCCAGCACT	TGGGA	CGGC	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGGTTCTTTCCAGCACTTGGGACGGCTACTATCACTACTACGGTATGGACGTC	HGFFPALGTATITTTVWTS	265	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	264	116	108	6	2	93.1
CDR3-IMGT (germline)	265	270	6	6	0	0	100
Total	N/A	N/A	270	257	11	2	95.2


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  C  V  S  W  V  R
                    Query_12392  1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTCTGTGTGAGCTGGGTCCG  90
V  95.2% (257/270)  IGHV2-70*13  30   ......................................................................A.G............A....  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  T  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T
                    Query_12392  91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACTCATTACTTGGGATGATGATAAATACTACAGCACATCTCTGAAGACCAGGCTCAC  180
V  95.2% (257/270)  IGHV2-70*13  120  ........................................GA................................................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ----------------------FR3-IMGT-----------------------------------------------------><-----
                                        I  S  K  D  T  S  K  K  T  R  W  P  S  H  *  P  T  W  T  L  W  T  Q  P  P  T  I  V  H  G
                    Query_12392  181  CATCTCCAAGGACACCTCAAAAAAAACCAGGTGGCCCTCACACTGACCAACATGGACCCTGTGGACACAGCCACCTACTATTGTGCACGG  270
V  95.2% (257/270)  IGHV2-70*13  210  ..................--C.............T...T...A...............................G..T............  297
                                        I  S  K  D  T  S    K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R 

                                      ------------------CDR3-IMGT----------------------->                                 
                                        F  F  P  A  L  G  T  A  T  I  T  T  T  V  W  T  S  G  A  K  G  P  R  S  P  S  P   
                    Query_12392  271  GTTCTTTCCAGCACTTGGGACGGCTACTATCACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  354
D  100.0% (5/5)     IGHD1-26*01  8    ---------------.....----------------------------------------------------------------  12
J  96.7% (58/60)    IGHJ6*02     3    ------------------------.....CT.....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_62820

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           353     1e-99
IGHD2-15*01                                                                                           46.8    1e-09
IGHJ5*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGG	TATTGTAGTGGTGATAGCTGCTACTCC	GGGG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGGTATTGTAGTGGTGATAGCTGCTACTCCGGGGACAACTGGTTCGACCCC	ARWYCSGDSCYSGDNWFDP	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  I  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12393  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTATCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (237/248)  IGHV3-21*01  47   ....................................C........G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  H  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12393  91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAGTCACAAATATTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCC  180
V  95.6% (237/248)  IGHV3-21*01  137  ................................T...T...C................................................A  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      Q  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  I  Y  Y  C  A  R  W  Y  C  S  G  D  S  
                    Query_12393  181  AGAACTCTCTGTATCTGCAAATGAATAGCCTGAGAGTCGAGGACACGGCTATTTATTACTGTGCGAGATGGTATTGTAGTGGTGATAGCT  270
V  95.6% (237/248)  IGHV3-21*01  227  .......A.................C..........C.............G.G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  96.3% (26/27)    IGHD2-15*01  5    -----------------------------------------------------------------------.............G.....  23

                                      -IMGT----------------------->                                  
                                      C  Y  S  G  D  N  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_12393  271  GCTACTCCGGGGACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  333
D  96.3% (26/27)    IGHD2-15*01  24   ........-------------------------------------------------------  31
J  98.0% (50/51)    IGHJ5*02     1    ------------.......................................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_62821

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           262     4e-72
IGHD5-18*01                                                                                           12.2    30   
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	ACAGGGGCATCA	GGTTAC	GGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGGGCATCAGGTTACGGGTGGTTCGACCCC	TGASGYGWFDP	237	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	20	23	4	4	0	0	100
CDR1-IMGT	24	47	24	15	9	0	62.5
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	21	3	0	87.5
FR3-IMGT	123	236	114	101	13	0	88.6
Total	N/A	N/A	217	192	25	0	88.5


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  L  T  M  S  D  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_12394  20   GTCTGGACTGACGATGAGTGATTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  109
V  88.5% (192/217)  IGHV3-33*03  72   .......T.C..CT.C...AGC.....C..............................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  L  K  K  F  Y  V  D  S  V  Q  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  D
                    Query_12394  110  TGGACTTAAAAAATTTTATGTAGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACGACTCCAAGAATACCCTGTATCTGCAGATGGA  199
V  88.5% (192/217)  IGHV3-33*03  162  ....AG...T....AC....C..........A..........................A..........C..G...........A...A.  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------CDR3-IMGT----------->                    
                                        G  L  R  A  E  D  T  A  H  Y  Y  C  T  G  A  S  G  Y  G  W  F  D  P  W  G  Q  G  T  L  V
                    Query_12394  200  CGGCCTGAGAGCCGAGGACACGGCTCATTATTACTGTACAGGGGCATCAGGTTACGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  289
V  88.5% (192/217)  IGHV3-33*03  252  .A.......................GTG.........-----------------------------------------------------  288
                                        S  L  R  A  E  D  T  A  V  Y  Y  C                                                      
D  100.0% (6/6)     IGHD5-18*01  15   -------------------------------------------------......-----------------------------------  20
J  97.8% (45/46)    IGHJ5*02     6    ----------------------------------------------------------................................  37

                                                    
                                        T  V  S  S  
                    Query_12394  290  CACCGTCTCGTCAG  303
J  97.8% (45/46)    IGHJ5*02     38   .........C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_62822

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           355     3e-100
IGHD2-21*02                                                                                           12.2    32    
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCCCCAGGAGGATTAG	GGTGAC	CACA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCCCCAGGAGGATTAGGGTGACCACATTTGACTAC	ARSPRRIRVTTFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  I  V  S  G  A  S  V  S  S  G  N  Y  C  W  S  W  I  R  Q  P  P  G  R  G 
                    Query_12395  1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGCCTCCGTCAGCAGTGGTAATTACTGCTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGA  90
V  95.6% (238/249)  IGHV4-61*01  49   ...................C...........G.................G.....A.............................A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  F  Y  H  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_12395  91   CTGGAGTGGATTGGGTATTTCTATCACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCC  180
V  95.6% (238/249)  IGHV4-61*01  139  ..................A.....T..............A..................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  S  P  R  R  I  R  V 
                    Query_12395  181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCATGTATTACTGTGCGAGATCCCCCAGGAGGATTAGGGTG  270
V  95.6% (238/249)  IGHV4-61*01  229  ...................A...............................G.................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-21*02  14   --------------------------------------------------------------------------------------....  17

                                      -------------->                                  
                                       T  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12395  271  ACCACATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
D  100.0% (6/6)     IGHD2-21*02  18   ..-----------------------------------------------  19
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_42052

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           279     3e-77
IGHD3-10*01                                                                                           14.1    9.1  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGGGA	TTCGGTGAATTAT	CAGGAAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGGGATTCGGTGAATTATCAGGAATCTACTATTATGGTATGGACGTC	ARLGFGELSGIYYYGMDV	258	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	119	66	49	2	15	74.2
CDR2-IMGT	120	143	24	18	6	0	75
FR3-IMGT	144	257	114	104	10	0	91.2
CDR3-IMGT (germline)	258	262	5	5	0	0	100
Total	N/A	N/A	262	222	25	15	84.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><----------------------------FR2-IMGT
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  D  T  Y  T  F  I  T  Y  T  M  N  W  V  R  Q  A  
                    Query_12396  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCAGGATTCACCTTCGATACCTACACCTTCATCACGTACACCATGAACTGGGTCCGCCAGGCTC  90
V  84.7% (222/262)  IGHV3-21*01  47   .....................C......T............AG..G...T.G.---------------......................  121
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S                 M  N  W  V  R  Q  A  

                                      ----------------------------><-------CDR2-IMGT------><------------------------------------
                                      P  G  K  G  L  E  W  V  S  S  I  S  G  R  G  D  Y  I  N  Y  A  A  S  V  K  G  R  F  T  V  
                    Query_12396  91   CAGGGAAGGGACTGGAGTGGGTCTCGTCCATTAGTGGTCGTGGTGACTACATAAACTACGCAGCCTCAGTGAAGGGCCGATTCACCGTCT  180
V  84.7% (222/262)  IGHV3-21*01  122  ..........G..............A.........A..A..A..AGT......T.........A......................A...  211
                                      P  G  K  G  L  E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  

                                      ----------------FR3-IMGT----------------------------------------------------><------------
                                      S  R  D  N  A  N  N  S  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  L  G  
                    Query_12396  181  CCAGAGACAACGCCAACAACTCACTGTATCTCCAGATGGACAGCCTGAGAGCCGAAGACACGGCTCTATATTACTGTGCGAGGCTGGGAT  270
V  84.7% (222/262)  IGHV3-21*01  212  ................G..............G..A...A................G.........G.G..............--------  293
                                      S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A           
D  84.6% (11/13)    IGHD3-10*01  13   -----------------------------------------------------------------------------------------.  13

                                      ----------CDR3-IMGT--------------------->                                 
                                      F  G  E  L  S  G  I  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  F  S 
                    Query_12396  271  TCGGTGAATTATCAGGAATCTACTATTATGGTATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTTCTCA  344
D  84.6% (11/13)    IGHD3-10*01  14   ....G..G....--------------------------------------------------------------  25
J  92.7% (51/55)    IGHJ6*02     8    -------------------......C..C....................A...................C....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_62828

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           374     8e-106
IGHD1-7*01                                                                                            12.2    35    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GGGGGGGGGG	GGAACT	CGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGGGGGGGGGGGGAACTCGGGGACTACTTTGACTAC	ARGGGGELGDYFDY	281	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	166	21	16	5	0	76.2
FR3-IMGT	167	280	114	102	12	0	89.5
CDR3-IMGT (germline)	281	287	7	6	1	0	85.7
Total	N/A	N/A	287	263	24	0	91.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N
                    Query_12397  1    GCAGCTGGTGCAGTCTGGGGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAA  90
V  91.6% (263/287)  IGHV3-53*01  6    ..........G.......A.......................................................................  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  S  W  V  R  Q  A  P  G  K  R  L  E  W  V  S  S  I  F  S  N  G  N  T  Y  Y  T  D  S
                    Query_12397  91   CTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGAGGCTGGAGTGGGTCTCAAGCATTTTTAGTAATGGTAACACATACTACACAGACTC  180
V  91.6% (263/287)  IGHV3-53*01  96   ..................................G.................GTT....A...CGG.....G..........G.......  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  V  Y  L  Q  V  H  S  R  G  A  G  D  R  A  V
                    Query_12397  181  CGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGGTGTATCTTCAGGTGCACAGCCGGGGGGCGGGGGACAGGGCCGT  270
V  91.6% (263/287)  IGHV3-53*01  186  ..............................................C..........AA..A......T.A.A..C.A.....C......  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><----------------CDR3-IMGT--------------->                                  
                                        Y  Y  W  A  R  G  G  G  G  E  L  G  D  Y  F  D  Y  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_12397  271  GTATTACTGGGCAAGAGGGGGGGGGGGGGAACTCGGGGACTACTTTGACTACTGGGGCCAGGGATCCCTGGTCATCGTCTCCTCAG  356
V  91.6% (263/287)  IGHV3-53*01  276  .........T..G....---------------------------------------------------------------------  292
                                        Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD1-7*01   10   ---------------------------......-----------------------------------------------------  15
J  95.8% (46/48)    IGHJ4*02     1    --------------------------------------..........................A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_62829

Length=416
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            444     7e-127
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCTTTCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTTCTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPFFYYGMDV	290	358	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	68	3	0	95.8
CDR1-IMGT	77	100	24	24	0	0	100
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	113	1	0	99.1
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	292	288	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  
                    Query_12398  6    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCT  95
V  98.6% (288/292)  IGHV1-2*04   5    ...................G.............AG.......................................................  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  
                    Query_12398  96   ACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCAC  185
V  98.6% (288/292)  IGHV1-2*04   95   ..........................................................................................  184
                                      Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  
                    Query_12398  186  AGAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGG  275
V  98.6% (288/292)  IGHV1-2*04   185  ..........................................................................................  274
                                      Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  

                                      -------------><-----------------------------CDR3-IMGT----------------------------->       
                                      A  V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  F  F  Y  Y  G  M  D  V  W  G  
                    Query_12398  276  CCGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTTCTTCTACTACGGTATGGACGTCTGGGGCC  365
V  98.6% (288/292)  IGHV1-2*04   275  .........A............--------------------------------------------------------------------  296
                                      A  V  Y  Y  C  A  R                                                                       
D  94.7% (18/19)    IGHD3-22*01  7    ----------------------------------...........G.......-------------------------------------  25
J  100.0% (52/52)   IGHJ6*02     11   ----------------------------------------------------------------..........................  36

                                                                
                                      Q  G  T  T  V  T  V  S  S 
                    Query_12398  366  AAGGGACCACGGTCACCGTCTCCTCA  391
J  100.0% (52/52)   IGHJ6*02     37   ..........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40814496


Query= Query_134201

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-22*01                                                                                           25.7    0.003
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGC	AGTAGTGGTTATT	GG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTCGACCCC	ARGGSSGYWWFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12399  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTATTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*01  49   ...............................G..........A....C.......G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  F  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12399  91   TGGATTGGGTTTATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGGGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.9% (234/244)  IGHV4-59*01  139  ..........A.........C.................................A...................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  S  S  G  Y  W  W  F 
                    Query_12399  181  CAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTC  270
V  95.9% (234/244)  IGHV4-59*01  229  ...............C...G.................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD3-22*01  14   ---------------------------------------------------------------------.............--------  26
J  93.5% (43/46)    IGHJ5*02     6    ------------------------------------------------------------------------------------......  11

                                      ----->                                  
                                       D  P  W  G  Q  A  I  P  V  T  V  S  S  
                    Query_12399  271  GACCCCTGGGGCCAGGCAATCCCGGTCACCGTCTCCTCAG  310
J  93.5% (43/46)    IGHJ5*02     12   ................G..C..T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_306006

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           382     3e-108
IGHD4-17*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGGAAT	TACGGTGACTAC	GGACTAACGT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCGGAATTACGGTGACTACGGACTAACGTACTTCTTTGACTAC	AKDRNYGDYGLTYFFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12400  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-30*18  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12400  91   AGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATACTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  98.8% (247/250)  IGHV3-30*18  137  .............................................C............................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  R  N  Y  G  D  Y  
                    Query_12400  181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTCTGTATTACTGTGCGAAAGACCGGAATTACGGTGACTACG  270
V  98.8% (247/250)  IGHV3-30*18  227  ...A..............................................G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (12/12)   IGHD4-17*01  5    -----------------------------------------------------------------------------............-  16

                                      GT-------------------->                                  
                                      G  L  T  Y  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12400  271  GACTAACGTACTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  97.9% (47/48)    IGHJ4*02     1    ---------...A............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_134200

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD2-21*02                                                                                           16.1    2.5   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TTTG	GGTGATGACTG	GGATCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTTTGGGTGATGACTGGGATCAATACTACTTTGACTAC	ASLGDDWDQYYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	270	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  T  G  E  S  L  K  I  S  C  R  C  S  G  Y  R  F  T  N  Y
                    Query_12401  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGACCGGGGAGTCTCTGAAGATCTCCTGTAGGTGTTCTGGATACAGGTTTACCAATTA  90
V  93.8% (270/288)  IGHV5-51*01  6    ..................................C...........................A.G.............C.......GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  M  G  M  M  N  P  G  D  S  D  T  R  Y  S  P
                    Query_12401  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACATGGGAATGATGAATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  93.8% (270/288)  IGHV5-51*01  96   ........G...................................GG.....G..C..CT...............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  G  Q  V  T  I  S  A  D  E  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_12401  181  GCCCTTCCAAGGCCAGGTCACCATCTCAGCCGACGAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  93.8% (270/288)  IGHV5-51*01  186  .T................................A..........C...........................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  H  C  A  S  L  G  D  D  W  D  Q  Y  Y  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_12401  271  CATGTATCACTGTGCGAGTTTGGGTGATGACTGGGATCAATACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  359
V  93.8% (270/288)  IGHV5-51*01  276  .......T..........-----------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                          
D  90.9% (10/11)    IGHD2-21*02  11   ----------------------....G......--------------------------------------------------------  21
J  97.9% (47/48)    IGHJ4*02     1    -----------------------------------------...................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_193136

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           296     2e-82
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	230	262	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	106	8	0	93
Total	N/A	N/A	217	203	14	0	93.5


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  L  S  G  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_12402  13   GTCTGGATTCACGTTGAGTGGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  93.5% (203/217)  IGHV3-33*03  72   ............C..C...A.C.....C..............................................................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  I  N  K  Y  Y  A  D  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  F  L  Q  M  N
                    Query_12402  103  TGGAATTAATAAATACTATGCAGACCCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCAAGAACACCCTGTTTCTGCAGATGAA  192
V  93.5% (203/217)  IGHV3-33*03  162  .....G...................T................................A.............G....A......A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------CDR3-IMGT----------->                    
                                        S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  D  P  W  G  Q  G  T  L  V
                    Query_12402  193  CAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  282
V  93.5% (203/217)  IGHV3-33*03  252  .........................G.G.....C...-----------------------------------------------------  288
                                        S  L  R  A  E  D  T  A  V  Y  Y  C                                                      
D  90.9% (10/11)    IGHD6-13*01  7    ------------------------------------------....G......-------------------------------------  17
J  100.0% (46/46)   IGHJ5*02     6    ----------------------------------------------------------................................  37

                                                    
                                        T  V  S  S  
                    Query_12402  283  CACCGTCTCCTCAG  296
J  100.0% (46/46)   IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_306007

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           431     4e-123
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	AGCIGARPWSDY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	71	0	0	100
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	112	2	0	98.2
CDR3-IMGT (germline)	289	294	6	5	1	0	83.3
Total	N/A	N/A	290	283	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  
                    Query_12403  5    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACT  94
V  97.6% (283/290)  IGHV5-51*03  5    ...............................................................................C.......G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      F  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  
                    Query_12403  95   TCTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCC  184
V  97.6% (283/290)  IGHV5-51*03  95   A...................................................G............................G........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  R  A  S  D  T  
                    Query_12403  185  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACACCG  274
V  97.6% (283/290)  IGHV5-51*03  185  ...........................................................................A..............  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-------------CDR3-IMGT------------>                                  
                                      A  M  Y  Y  C  A  G  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12403  275  CCATGTATTACTGTGCGGGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  97.6% (283/290)  IGHV5-51*03  275  .................A..----------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    ---------------------......C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_42056

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            350     9e-99
IGHD1-26*01                                                                                           18.0    0.62 
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CG	GTGGGACCTACT	TATTCTTAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGTGGGACCTACTTATTCTTATTACTTTGACTAC	ARAVGPTYSYYFDY	264	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	77	27	23	4	0	85.2
FR2-IMGT	78	128	51	48	3	0	94.1
CDR2-IMGT	129	149	21	20	1	0	95.2
FR3-IMGT	150	263	114	100	14	0	87.7
CDR3-IMGT (germline)	264	270	7	7	0	0	100
Total	N/A	N/A	270	247	23	0	91.5


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  A  G  S  I  D  S  S  T  W  W  T  W  V  
                    Query_12404  1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGCTGGCTCCATCGACAGTAGTACCTGGTGGACTTGGGTCC  90
V  91.5% (247/270)  IGHV4-4*02   26   ................T..................................G..........AG........A........G........  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  L  G  E  I  D  H  S  G  S  T  T  Y  N  P  S  L  Q  S  R  V  
                    Query_12404  91   GCCAGCCCCCAGGGAAGGGGCTGGAGTGGCTTGGCGAAATCGATCATAGTGGGAGCACCACCTACAACCCGTCCCTCCAGAGTCGAGTCA  180
V  91.5% (247/270)  IGHV4-4*02   116  .............................A....G......T..................A................A............  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  V  A  V  D  K  S  N  N  L  F  S  V  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  
                    Query_12404  181  CCGTAGCGGTGGACAAATCCAACAATCTGTTCTCCGTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCCGTTTATTATTGTGCGAGAG  270
V  91.5% (247/270)  IGHV4-4*02   206  ..A..T.A..A.....G.....G..C.A.......C.........G...........................G.....C..........  295
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  

                                      ----------CDR3-IMGT--------------->                                  
                                      A  V  G  P  T  Y  S  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12404  271  CGGTGGGACCTACTTATTCTTATTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  91.7% (11/12)    IGHD1-26*01  7    --......G.....-------------------------------------------------------  18
J  100.0% (46/46)   IGHJ4*02     3    -----------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_139084

Length=315
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           307     1e-85
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	N/A	N/A	TCGACCCTGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCGACCCTGCTTGACAAA	ASTLLDK	238	258	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	48	3	0	94.1
CDR2-IMGT	100	123	24	20	4	0	83.3
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	228	212	16	0	93


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  S  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  T  G  I 
                    Query_12405  13   TGTGCAGCCTCTGGATTCAGCTTTAGCACCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCACAGGTATC  102
V  93.0% (212/228)  IGHV3-23*01  64   ...................C........G............C.......................................T...C...T  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  S  G  E  N  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  K  N  T  V  S  V 
                    Query_12405  103  AGTGGTAGTGGTGAAAACACATACTACGCAGACTCCGTGAAGGGCCGTTTCACCGTCTCCAGAGACAATTCCAAGAACACGGTGTCTGTG  192
V  93.0% (212/228)  IGHV3-23*01  154  .............GT.G..............................G......A..........................C...A.C..  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----CDR3-IMGT----->                        
                                       Q  M  D  S  L  S  A  E  D  T  A  V  Y  Y  C  A  S  T  L  L  D  K  W  G  Q  G  T  L  V  T 
                    Query_12405  193  CAAATGGACAGCCTGAGCGCCGAGGACACGGCCGTATATTACTGTGCGTCGACCCTGCTTGACAAATGGGGCCAGGGAACCCTGGTCACC  282
V  93.0% (212/228)  IGHV3-23*01  244  ......A..........A..............................------------------------------------------  291
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
J  92.9% (39/42)    IGHJ4*02     7    ----------------------------------------------------------.....T.C........................  38

                                                
                                       V  S  P  
                    Query_12405  283  GTCTCCCCAG  292
J  92.9% (39/42)    IGHJ4*02     39   ......T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30410208


Query= Query_139085

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           420     7e-120
IGHD3-10*01                                                                                           23.8    0.013 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTAGAA	GGTTCGGGGAGT	CACGACTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTAGAAGGTTCGGGGAGTCACGACTCTTACTACTACGCTATGGACGTC	ARDPLEGSGSHDSYYYAMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  R  Y
                    Query_12406  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGGTA  90
V  96.2% (280/291)  IGHV1-46*01  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  I  I  N  P  S  G  G  T  T  K  Y  A  Q
                    Query_12406  91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCAATAATCAATCCTAGTGGTGGTACCACAAAATACGCACA  180
V  96.2% (280/291)  IGHV1-46*01  96   ..................................................G.........C.............G.....GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  D  L  T  S  L  R  S  E  D  T  A
                    Query_12406  181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGACCTGACCAGCCTGAGATCTGAGGACACGGC  270
V  96.2% (280/291)  IGHV1-46*01  186  ............................................................G....G........................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        I  Y  Y  C  A  R  D  P  L  E  G  S  G  S  H  D  S  Y  Y  Y  A  M  D  V  W  G  Q  G  T  A
                    Query_12406  271  CATCTATTACTGTGCGAGAGATCCTTTAGAAGGTTCGGGGAGTCACGACTCTTACTACTACGCTATGGACGTCTGGGGCCAAGGGACCGC  360
V  96.2% (280/291)  IGHV1-46*01  276  .G.G.................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD3-10*01  11   -------------------------------............-----------------------------------------------  22
J  96.3% (52/54)    IGHJ6*02     9    ----------------------------------------------------..........G.........................A.  46

                                                      
                                        V  T  V  S  S 
                    Query_12406  361  GGTCACCGTCTCCTCA  376
J  96.3% (52/54)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_139087

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGATGGA	ATTACTAT	CAAACGAAGCA	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCGATGGAATTACTATCAAACGAAGCAATGGTTTTGATATA	TRGDGITIKRSNGFDI	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_12407  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGGCTTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  94.7% (233/246)  IGHV3-53*01  47   ................................................A.......AGC......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_12407  91   AGTGGGTCTCAGTTATTTACAGCGGTGGTACCACATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.7% (233/246)  IGHV3-53*01  137  ...................T..........G........A..................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  L  Y  Y  C  T  R  G  D  G  I  T  I  K  R  
                    Query_12407  181  ACACGCTGTATCTTCAAATGCACAGCCTGAGAGCCGACGACACGGCCCTGTACTACTGTACGAGAGGCGATGGAATTACTATCAAACGAA  270
V  94.7% (233/246)  IGHV3-53*01  227  ....................A................G.........G....T......G......------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  3    --------------------------------------------------------------------------........--------  10

                                      ---------------->                                  
                                      S  N  G  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12407  271  GCAATGGTTTTGATATATGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  321
J  93.8% (45/48)    IGHJ3*02     3    ---...C.........C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_139080

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         367     6e-104
IGHD4-17*01                                                                                           21.8    0.040 
IGHJ5*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGACTACGGTG	GTGACTC	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATGACTACGGTGGTGACTCCAATTGGTTCGACCCC	VRDDYGGDSNWFDP	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	243	8	0	96.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  R  G 
                    Query_12408    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  96.8% (243/251)  IGHV4-30-2*01  49   .....................................................................................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  S  Y  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_12408    91   CTGGAGTGGATTGGGTACATCTATCATAGTGGGAGCTCCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCAATAGACACGTCC  180
V  96.8% (243/251)  IGHV4-30-2*01  139  ....................................A.....................................A...G......G....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  D  D  Y  G  G  D  S 
                    Query_12408    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGTCAGAGATGACTACGGTGGTGACTCC  270
V  96.8% (243/251)  IGHV4-30-2*01  229  .....................................................G.....C....C......-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD4-17*01    1    -----------------------------------------------------------------------...........--------  11
J  97.9% (47/48)    IGHJ5*02       2    -----------------------------------------------------------------------------------------.  2

                                        -------------->                                
                                         N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12408    271  AATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  317
J  97.9% (47/48)    IGHJ5*02       3    ..C............................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_139082

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD2-21*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGGGGG	ATTGTGATGGT	ATTAACTGCTTCCCCTGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGGATTGTGATGGTATTAACTGCTTCCCCTGGTACTACTATTATGGAATGCACGTC	AKGDCDGINCFPWYYYYGMHV	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	221	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  L  Y  G  G  S  F  S  G  H  Y  W  I  W  L  R  Q  S  P  G  K  G  L  E 
                    Query_12409  1    ACCCTGTCCCTCACCTGCGCTCTCTATGGTGGGTCCTTCAGTGGTCACTACTGGATTTGGCTCCGCCAGTCCCCCGGGAAGGGGCTGGAG  90
V  91.7% (221/241)  IGHV4-34*01  49   .....................G.......................T.........GC...A........C....A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  K  Y  N  S  S  L  K  S  R  V  A  M  S  I  D  A  S  K  S 
                    Query_12409  91   TGGATTGGGGAAATCAATCATAGTGGAAGCACGAAGTACAACTCGTCCCTCAAGAGTCGAGTCGCCATGTCAATAGACGCGTCCAAGAGT  180
V  91.7% (221/241)  IGHV4-34*01  139  ................................C..C......C....................A....A...G.....A.........AC  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  Y  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  G  D  C  D  G  I  N  C  F 
                    Query_12409  181  CAATTCTACCTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAAGGGGGATTGTGATGGTATTAACTGCTTC  270
V  91.7% (221/241)  IGHV4-34*01  229  ..G....C...........G...........................G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (10/11)    IGHD2-21*01  6    -------------------------------------------------------------------......G....------------  16

                                      MGT-------------------------->                                 
                                       P  W  Y  Y  Y  Y  G  M  H  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_12409  271  CCCTGGTACTACTATTATGGAATGCACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  333
J  91.2% (52/57)    IGHJ6*02     6    ------........C..C..T...G...........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_139083

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           433     1e-123
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_12410  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  97.9% (283/289)  IGHV5-51*01  6    .............................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  S  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_12410  91   CTGGATCGGCTGGGTGCGCCAGATGTCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  97.9% (283/289)  IGHV5-51*01  96   .........................C......................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12410  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (283/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12410  271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  97.9% (283/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_12410  361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_134205

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           344     6e-97
IGHD3-22*01                                                                                           39.1    3e-07
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCTCTG	ATTACTATGAAAGTAGTGGTTAT	N/A	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCTCTGATTACTATGAAAGTAGTGGTTATGACCTC	ARPSDYYESSGYDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  G  A  S  G  F  T  F  N  Y  Y  S  L  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12411  1    GGTCCCTGAGACTCTCCTGTGGAGCCTCTGGATTCACCTTCAATTACTATAGCTTGAACTGGGTCCGCCAGGCTCCCGGGAAGGGTCTGG  90
V  94.4% (234/248)  IGHV3-21*01  47   .....................C....................G.AG.......A......................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  S  I  S  S  H  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12411  91   AGTGGCTCTCATCCATTAGCAGTCATAGTAGTTACATATATTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (234/248)  IGHV3-21*01  137  .....G.............T...AG...............C.................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  S  D  Y  Y  E  S  
                    Query_12411  181  AGAACTCACTGTATCTGCAAATGAACAACCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGACCCTCTGATTACTATGAAAGTA  270
V  94.4% (234/248)  IGHV3-21*01  227  ...........................G........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.7% (22/23)    IGHD3-22*01  3    ---------------------------------------------------------------------------..........T....  17

                                      ------------->                                  
                                      S  G  Y  D  L  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_12411  271  GTGGTTATGACCTCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  318
D  95.7% (22/23)    IGHD3-22*01  18   ........----------------------------------------  25
J  95.0% (38/40)    IGHJ5*02     12   --------....C.................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_42054

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           374     8e-106
IGHD2-2*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTAG	GTTCGCCTT	TTGTACTAGTACCAGCTGC	CATTCATCCCTACGCAAATCG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGGTTCGCCTTTTGTACTAGTACCAGCTGCCATTCATCCCTACGCAAATCGGACTAC	TRFAFCTSTSCHSSLRKSDY	249	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	112	2	0	98.2
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	246	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  S  F  G  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12412  1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCAGCTTTGGCAATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (246/253)  IGHV3-49*04  47   ....................................C......TG.............................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  A  F  G  G  A  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_12412  91   AGTGGGTAGGTTTCATTAGAAGCAAAGCTTTTGGTGGGGCAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  97.2% (246/253)  IGHV3-49*04  137  ..............................A.......A...................................................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  F  A  F  C  T  
                    Query_12412  181  ATTCCAAAAGCATCGCCTATCTGCAGATGAACAGCCTAAAAACCGAGGACACAGCCGTGTATTACTGTACTAGGTTCGCCTTTTGTACTA  270
V  97.2% (246/253)  IGHV3-49*04  227  .........................A...........G...................................-----------------  299
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  94.7% (18/19)    IGHD2-2*01   7    ----------------------------------------------------------------------------------.....G..  14

                                      ----CDR3-IMGT------------------------>                                  
                                      S  T  S  C  H  S  S  L  R  K  S  D  Y  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_12412  271  GTACCAGCTGCCATTCATCCCTACGCAAATCGGACTACTGGGGCCAGGGAACCCTGGTCGCTGTCTCCTCAG  342
D  94.7% (18/19)    IGHD2-2*01   15   ...........-------------------------------------------------------------  25
J  95.0% (38/40)    IGHJ4*02     9    --------------------------------...........................A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_139088

Length=407
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           372     3e-105
IGHD3-10*02                                                                                           10.3    144   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGGCCCTCAGCGACGGCCACAATT	TGTTC	AAA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATGGGGCCCTCAGCGACGGCCACAATTTGTTCAAATACTACGGTATGGACGTC	VRDGALSDGHNLFKYYGMDV	289	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	19	5	0	79.2
FR3-IMGT	175	288	114	100	14	0	87.7
CDR3-IMGT (germline)	289	296	8	7	1	0	87.5
Total	N/A	N/A	296	267	29	0	90.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  N  F  T 
                    Query_12413  1    CAGGTTCAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTCAGGCTTCTGGTTACAATTTTACC  90
V  90.2% (267/296)  IGHV1-18*01  1    .........................C.......................................CA...............CC......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  F  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  V  D  N  G  N  T  K  Y 
                    Query_12413  91   AATTTTGGTATCAGCTGGGTGCGGCAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCGGCGTTGATAATGGTAATACAAAATAT  180
V  90.2% (267/296)  IGHV1-18*01  91   .GC.A..................A.......................................A...C.T.C........C.....C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  I  L  Q  G  R  V  T  L  T  T  D  T  S  T  R  K  T  Y  M  Q  L  R  S  L  R  S  D  D 
                    Query_12413  181  GCACAGATTCTCCAGGGCAGAGTCACCTTGACCACAGACACATCTACGAGAAAAACCTATATGCAACTGAGGAGTCTGAGATCTGACGAC  270
V  90.2% (267/296)  IGHV1-18*01  181  .......AG..................A................C.....C.C.G....C...G.G........C...............  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  V  Y  Y  C  V  R  D  G  A  L  S  D  G  H  N  L  F  K  Y  Y  G  M  D  V  W  G  Q  G 
                    Query_12413  271  ACGGCCGTCTATTATTGTGTGAGAGATGGGGCCCTCAGCGACGGCCACAATTTGTTCAAATACTACGGTATGGACGTCTGGGGCCAAGGG  360
V  90.2% (267/296)  IGHV1-18*01  271  ........G.....C....C......----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD3-10*02  10   ----------------------------------------------------.....---------------------------------  14
J  98.0% (50/51)    IGHJ6*02     12   ------------------------------------------------------------..............................  41

                                                           
                                       T  T  V  T  V  S  S 
                    Query_12413  361  ACTACGGTCACCGTCTCCTCA  381
J  98.0% (50/51)    IGHJ6*02     42   ..C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39867768


Query= Query_139089

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            272     2e-75
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAGGAC	TAGCACCACCTGG	AGCGGGAACAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGACTAGCACCACCTGGAGCGGGAACATACAACTGGTTCGACCCC	ARLGLAPPGAGTYNWFDP	230	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	17	7	0	70.8
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	19	5	0	79.2
FR3-IMGT	116	229	114	104	10	0	91.2
CDR3-IMGT (germline)	230	235	6	6	0	0	100
Total	N/A	N/A	222	198	24	0	89.2


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  L  R  F  S  S  I  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  H  I  N  Q  D 
                    Query_12414  14   TCTGGACTCAGGTTCAGTAGTATTTGGATGAGCTGGGTCCGCCAGGCTCCTGGGAAGGGGCTGGAGTGGGTGGCCCACATAAATCAAGAT  103
V  89.2% (198/222)  IGHV3-7*01   73   ......T...CC..T.....CTA...........................A........................A.......G......  162
                                       S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  K  Q  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       A  S  D  H  Y  Y  L  D  S  V  K  G  R  F  T  V  S  R  D  N  A  K  S  S  V  F  L  Q  M  N 
                    Query_12414  104  GCAAGTGACCACTACTATCTGGACTCTGTGAAGGGTCGATTCACCGTCTCCAGAGACAACGCCAAGAGTTCAGTGTTTCTGCAAATGAAC  193
V  89.2% (198/222)  IGHV3-7*01   163  .G......GA.A......G................C.........A.....................AC...C...A.............  252
                                       G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><----------------------CDR3-IMGT--------------------->
                                       S  L  T  A  E  D  T  A  V  Y  Y  C  A  R  L  G  L  A  P  P  G  A  G  T  Y  N  W  F  D  P 
                    Query_12414  194  AGCCTGACAGCCGAAGACACGGCTGTTTATTACTGTGCGAGACTAGGACTAGCACCACCTGGAGCGGGAACATACAACTGGTTCGACCCC  283
V  89.2% (198/222)  IGHV3-7*01   253  .......G......G...........G...............------------------------------------------------  294
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  84.6% (11/13)    IGHD6-13*01  6    -------------------------------------------------.....G..G....----------------------------  18
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------.................  17

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12414  284  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  317
J  100.0% (51/51)   IGHJ5*02     18   ..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_101780

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           37.2    1e-06
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCTAGTCTGGAA	TATGATTACGTTTGGGGTAGTT	CTCACCTCAC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCTAGTCTGGAATATGATTACGTTTGGGGTAGTTCTCACCTCACCTGGTTCGACCCC	AREASLEYDYVWGSSHLTWFDP	238	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  S  I  S  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12415  1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCTCCATCAGTAGTCACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...................C.........................T...................G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  T  G  S  T  K  Y  N  P  S  L  R  S  R  V  P  I  S  V  D  T  S  K  N 
                    Query_12415  91   TGGATTGGGTATATGTATTACACTGGGAGCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCCCCATATCAGTAGACACGTCCAAGAAT  180
V  95.5% (234/245)  IGHV4-59*01  139  ..............C.......G............C................A..........A.........................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------------CDR3
                                       Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  E  A  S  L  E  Y  D  Y  V 
                    Query_12415  181  CAGTTCTCCCTGAAGTTGAGCTCTGTGAGCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAAGCTAGTCTGGAATATGATTACGTT  270
V  95.5% (234/245)  IGHV4-59*01  229  ...............C............C....................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.5% (21/22)    IGHD3-16*01  5    ------------------------------------------------------------------------------............  16

                                      -IMGT--------------------------->                                  
                                       W  G  S  S  H  L  T  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12415  271  TGGGGTAGTTCTCACCTCACCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  337
D  95.5% (21/22)    IGHD3-16*01  17   .....G....---------------------------------------------------------  26
J  100.0% (47/47)   IGHJ5*02     5    --------------------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_147277

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           411     5e-117
IGHD1-26*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCG	AGTGGGAGCTACT	TGGGGCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTAC	ARDLEWELLGAFDY	282	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	9	68	60	59	1	0	98.3
CDR1-IMGT	69	92	24	23	1	0	95.8
FR2-IMGT	93	143	51	51	0	0	100
CDR2-IMGT	144	167	24	22	2	0	91.7
FR3-IMGT	168	281	114	109	5	0	95.6
CDR3-IMGT (germline)	282	289	8	8	0	0	100
Total	N/A	N/A	281	272	9	0	96.8


Alignments

                                      <-------------------------FR1-IMGT-------------------------><-------CDR1-IMGT------><-----
                                       Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  R  Y  A  I  S 
                    Query_12416  9    CAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGATATGCTATCAGC  98
V  96.8% (272/281)  IGHV1-69*06  16   ........G....................................................................C............  105
                                       Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y  A  I  S 

                                      ---------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------------------
                                       W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  S  F  G  T  A  H  Y  A  Q  R  F  Q 
                    Query_12416  99   TGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTAGCTTTGGAACAGCACACTACGCACAGAGATTCCAG  188
V  96.8% (272/281)  IGHV1-69*06  106  .......................................................T......T......A............AG......  195
                                       W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q  K  F  Q 

                                      --------------------------------FR3-IMGT--------------------------------------------------
                                       G  R  V  T  I  T  A  D  R  S  T  S  T  A  Y  M  E  L  S  S  L  S  S  E  D  T  A  V  Y  Y 
                    Query_12416  189  GGCAGAGTCACGATTACCGCGGACAGATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGCTCTGAGGACACGGCCGTGTATTAC  278
V  96.8% (272/281)  IGHV1-69*06  196  .........................A.......................................A........................  285
                                       G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A  V  Y  Y 

                                      --><----------------CDR3-IMGT--------------->                                  
                                       C  A  R  D  L  E  W  E  L  L  G  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12416  279  TGTGCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  357
V  96.8% (272/281)  IGHV1-69*06  286  ...........--------------------------------------------------------------------  296
                                       C  A  R                                                                       
D  100.0% (13/13)   IGHD1-26*01  6    ----------------.............--------------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     6    ------------------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_101782

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            341     5e-96
IGHD3-16*01                                                                                           14.1    8.4  
IGHJ5*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGC	GTATAATGAT	AAGTCCCCGAAGCATA	GGTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGCGTATAATGATAAGTCCCCGAAGCATAGGTCCGACTCC	AREAYNDKSPKHRSDS	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  G  S  N  W  W  S  W  V  R  H  P  P  G  K  G  L 
                    Query_12417  1    ACCCTGTCCCTCACCTGCGCAGTCTCTGGTGCCTCCATCAGCGGTAGTAACTGGTGGAGTTGGGTCCGCCACCCCCCAGGGAAGGGGCTG  90
V  94.0% (233/248)  IGHV4-4*02   49   ....................T..........G..........A............................G..................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  V  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  T  R 
                    Query_12417  91   GAGTGGATTGGGGAAATCTACCATGTTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGACCAGG  180
V  94.0% (233/248)  IGHV4-4*02   139  ....................T...AG........................................................A.T...A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  Q  F  S  L  N  L  N  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  N  D  K  S  P 
                    Query_12417  181  AACCAGTTCTCCCTCAATCTGAACTCTGCGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGAGGCGTATAATGATAAGTCCCCG  270
V  94.0% (233/248)  IGHV4-4*02   229  ..............G..G....G.....T.....................G.................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  90.0% (9/10)     IGHD3-16*01  1    -----------------------------------------------------------------------....T.....---------  10

                                      ----------------->                                  
                                       K  H  R  S  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12417  271  AAGCATAGGTCCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  95.6% (43/45)    IGHJ5*01     7    -------...T...............A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_101783

Length=413
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           411     5e-117
IGHD3-3*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AACCCCCCTCCCAAT	GATTTTTGGAGTG	ATGACACAAATAAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAACCCCCCTCCCAATGATTTTTGGAGTGATGACACAAATAAGTACTACTATAATGGAATGGACGTC	ARNPPPNDFWSDDTNKYYYNGMDV	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	276	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_12418  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  95.5% (276/289)  IGHV1-69*01  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        S  I  I  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  V  I  P  L  F  G  A  A  K  Y  A  Q
                    Query_12418  91   CTCTATCATCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGGTCATCCCTCTCTTTGGTGCAGCGAAATATGCACA  180
V  95.5% (276/289)  IGHV1-69*01  96   TG......G..............................................A........A........A....A..C..C.....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  S  A  D  E  P  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_12418  181  GAAGTTCCAGGGCAGAGTCACGATTAGCGCGGACGAACCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.5% (276/289)  IGHV1-69*01  186  ..........................C..........T....................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------------CDR3-IMGT------------------------------>     
                                        V  Y  Y  C  A  R  N  P  P  P  N  D  F  W  S  D  D  T  N  K  Y  Y  Y  N  G  M  D  V  W  G
                    Query_12418  271  CGTCTATTACTGTGCGAGAAACCCCCCTCCCAATGATTTTTGGAGTGATGACACAAATAAGTACTACTATAATGGAATGGACGTCTGGGG  360
V  95.5% (276/289)  IGHV1-69*01  276  ...G...............-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (13/13)   IGHD3-3*01   8    ----------------------------------.............-------------------------------------------  20
J  91.2% (52/57)    IGHJ6*02     6    -------------------------------------------------------------........CT.C..T..............  34

                                                                  
                                        Q  G  T  T  V  T  V  S  S 
                    Query_12418  361  CCAAGGGACAACGGTCACCGTCTCCTCA  388
J  91.2% (52/57)    IGHJ6*02     35   .........C..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40498920


Query= Query_147273

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           286     1e-79
IGHD3-22*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAC	ATAGTACTGG	CCGAATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATAGTACTGGCCGAATCATTGACTAT	ARAHSTGRIIDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	25	1	0	96.2
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	249	216	33	0	86.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  S  L  T  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G  
                    Query_12419  2    CCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCAGGGAAGGGCC  91
V  86.7% (216/249)  IGHV4-31*01  50   ..................C................A...G.A....TGG..A...C....G.............CA..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  M  G  Y  I  D  H  V  E  S  T  S  R  N  P  S  L  K  S  Q  L  T  I  S  L  D  P  S  
                    Query_12419  92   TGGAGTGGATGGGATACATCGATCACGTTGAGAGCACCTCCCGCAACCCGTCCCTCAAGAGTCAACTTACCATTTCACTTGACCCGTCTA  181
V  86.7% (216/249)  IGHV4-31*01  140  ..........T..G......T..T..AG..G........A.TA....................T.G.......A...G.A...A......  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  S  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  S  T  G  R  I  
                    Query_12419  182  AGAGCCAGTTCTCCCTAAAACTGACCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCACATAGTACTGGCCGAATCA  271
V  86.7% (216/249)  IGHV4-31*01  230  ...A............G..G....G....G.......................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-22*01  12   ------------------------------------------------------------------------......G...--------  21

                                      ------->                                  
                                      I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12419  272  TTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.6% (41/42)    IGHJ4*02     7    .......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_320969

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           307     1e-85
IGHD3-3*01                                                                                            23.8    0.011
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	ACTCTTCG	ATTACGATGTTTGGA	ACAGCCCTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTCTTCGATTACGATGTTTGGAACAGCCCTCGACTAC	ARDSSITMFGTALDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	220	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  E  P  F  T  G  Y  Y  W  A  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_12420  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGAGCCCTTCACTGGTTACTACTGGGCCTGGATCCGCCAGGCCCCCGGGAAGGGGCTGGAG  90
V  90.2% (220/244)  IGHV4-34*01  49   ..................GC.....A.....G.T......G.............AG.............C....A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  D  I  N  H  R  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  N  N 
                    Query_12420  91   TGGATTGGCGACATCAATCACCGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGCCGGGTCACCATATCTATAGACACGTCCAACAAC  180
V  90.2% (220/244)  IGHV4-34*01  139  ........G..A........TA..................................T..A...........AG.............G...  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  S  V  Y  Y  C  A  R  D  S  S  I  T  M  F  G  T 
                    Query_12420  181  CAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGTCTGTCTATTATTGTGCGAGAGACTCTTCGATTACGATGTTTGGAACA  270
V  90.2% (220/244)  IGHV4-34*01  229  ..............G....G......................G....G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD3-3*01   3    ------------------------------------------------------------------------........T......---  17

                                      ----------->                                  
                                       A  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12420  271  GCCCTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (40/40)   IGHJ4*02     9    ------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_101787

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           353     1e-99
IGHD2-15*01                                                                                           37.2    1e-06
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGATTCCC	GGATATTGTCGTGGTGGTAGGTGCT	CCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGATTCCCGGATATTGTCGTGGTGGTAGGTGCTCCGGCTACTACTACGGTTTGGACGTC	ARDRIPGYCRGGRCSGYYYGLDV	246	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_12421  4    CCCTGAGACTCTCCTGTACTGTCTCCGGTGCCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  95.2% (238/250)  IGHV4-31*02  50   .....TCC...A.............T....G...........................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  M  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  
                    Query_12421  94   TGGAGTGGATGGGGTACATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCTA  183
V  95.2% (238/250)  IGHV4-31*02  140  ..........T..............C.......................................G........................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  D  R  I  P  G  Y  C  
                    Query_12421  184  AGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCATGTACTACTGTGCGAGAGATCGGATTCCCGGATATTGTC  273
V  95.2% (238/250)  IGHV4-31*02  230  ..................A...............................G....T..............--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  92.0% (23/25)    IGHD2-15*01  2    --------------------------------------------------------------------------------.........A  11

                                      --CDR3-IMGT----------------------------->                                 
                                      R  G  G  R  C  S  G  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12421  274  GTGGTGGTAGGTGCTCCGGCTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  347
D  92.0% (23/25)    IGHD2-15*01  12   ..........C....-----------------------------------------------------------  26
J  98.2% (54/55)    IGHJ6*02     8    -------------------.............A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_320967

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           391     6e-111
IGHD6-19*01                                                                                           16.1    2.6   
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAGACGGGGTGTGTCT	GTGGCTGG	CTCGCCGGGT	AACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAGACGGGGTGTGTCTGTGGCTGGCTCGCCGGGTAACTCGTTCGACCCC	ARDRRGVSVAGSPGNSFDP	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	76	69	67	2	0	97.1
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	104	10	0	91.2
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_12422  8    CAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGTTAC  97
V  93.1% (270/290)  IGHV1-18*04  7    ...................C.............................A....................................C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  A  T  N  Y  A  Q 
                    Query_12422  98   GGTATCAACTGGGTGCGCCAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCCCTTATAATGGTGCCACAAACTATGCACAG  187
V  93.1% (270/290)  IGHV1-18*04  97   .......G.........A.................G........................G....C......AA................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  F  Q  D  R  V  T  M  T  T  D  T  S  T  N  S  A  S  M  D  L  R  S  L  T  S  D  D  T  A 
                    Query_12422  188  AACTTCCAGGACAGAGTCACCATGACCACAGACACATCCACCAACTCAGCCTCCATGGACCTGAGGAGCCTGACATCTGACGACACGGCC  277
V  93.1% (270/290)  IGHV1-18*04  187  ..GC......G..............................G.G.A......A......G.............G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  A  R  D  R  R  G  V  S  V  A  G  S  P  G  N  S  F  D  P  W  G  R  G  T  L  A 
                    Query_12422  278  GTCTATTACTGTGCGAGAGACAGACGGGGTGTGTCTGTGGCTGGCTCGCCGGGTAACTCGTTCGACCCCTGGGGCCGGGGAACCCTGGCC  367
V  93.1% (270/290)  IGHV1-18*04  277  ..G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (8/8)     IGHD6-19*01  11   ------------------------------------........----------------------------------------------  18
J  93.9% (46/49)    IGHJ5*02     3    ------------------------------------------------------....G.................A...........T.  38

                                                   
                                       T  V  S  S  
                    Query_12422  368  ACCGTCTCCTCAG  380
J  93.9% (46/49)    IGHJ5*02     39   .............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_320965

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           449     3e-128
IGHD3-22*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              108     9e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCCGT	TGGTTAT	AATTCCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTC	ARAVGYNSDYYYGMDV	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	74	0	0	100
CDR1-IMGT	79	102	24	24	0	0	100
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	112	2	0	98.2
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	290	3	0	99


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_12423  5    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  94
V  99.0% (290/293)  IGHV5-51*01  2    ..........................................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  A  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_12423  95   GCTACTGGATCGGCTGGGCGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  184
V  99.0% (290/293)  IGHV5-51*01  92   ..................T.......................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  P  S  F  Q  G  Q  V  T  I  S  A  D  K  A  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_12423  185  GACCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGGCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  99.0% (290/293)  IGHV5-51*01  182  .C.......................................T................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      T  A  M  Y  Y  C  A  R  A  V  G  Y  N  S  D  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  
                    Query_12423  275  CCGCCATGTATTACTGTGCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCG  364
V  99.0% (290/293)  IGHV5-51*01  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD3-22*01  19   ----------------------------.......-------------------------------------------------------  25
J  100.0% (56/56)   IGHJ6*02     7    ------------------------------------------................................................  54

                                              
                                      V  S  S 
                    Query_12423  365  TCTCCTCA  372
J  100.0% (56/56)   IGHJ6*02     55   ........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_320964

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	AGTGGC	TACTATGGCACTAGTGGT	GACATTCC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGTGGCTACTATGGCACTAGTGGTGACATTCCCAACTGGTTCGACCCC	SGYYGTSGDIPNWFDP	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  R  R  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_12424  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCCGTCGTAATTACTATTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  94.7% (230/243)  IGHV4-61*01  49   ..........................................A..G...G......C.....C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_12424  91   CTGGAGTGGATTGGATATATCTATTACCGTGGGACCACCAACTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCC  180
V  94.7% (230/243)  IGHV4-61*01  139  ..............G............A......G............C..............................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  T  Y  Y  C  S  G  Y  Y  G  T  S  G  D 
                    Query_12424  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCACTTATTACTGTAGTGGCTACTATGGCACTAGTGGTGAC  270
V  94.7% (230/243)  IGHV4-61*01  229  ...................................................GTG.........---------------------------  291
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  83.3% (15/18)    IGHD3-22*01  5    ---------------------------------------------------------------------.......AT.G.......---  22

                                      GT------------------>                                  
                                       I  P  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12424  271  ATTCCCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (50/50)   IGHJ5*02     2    -----..................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_320963

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           347     7e-98
IGHD6-13*01                                                                                           12.2    30   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	N/A	TGGTAC	TTCCCGACC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGATGGTACTTCCCGACCGACTAC	AGWYFPTDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12425  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-48*03  47   ....................................C.....................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  S  S  G  D  T  I  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12425  91   AGTGGCTTTCATACATTAGTAGTAGTGGTGATACCATTACTTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (235/248)  IGHV3-48*03  137  .....G.......................AG......ATAC...........T.....................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  L  H  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  G  W  Y  F  P  T  D  Y  
                    Query_12425  181  AGAACTCACTGCATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTATTGTGCGGGATGGTACTTCCCGACCGACTACT  270
V  94.8% (235/248)  IGHV3-48*03  227  ...........T........................C.....................C......A..----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD6-13*01  16   --------------------------------------------------------------------......----------------  21
J  100.0% (40/40)   IGHJ4*02     9    -----------------------------------------------------------------------------------.......  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12425  271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (40/40)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_320962

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     1e-87
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGAAGGG	TTACCATTTTTGGAGTGGTT	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGAAGGGTTACCATTTTTGGAGTGGTTCTTTGAGTAC	AKDEGLPFLEWFFEY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         P  L  R  L  S  C  V  A  S  G  F  I  F  S  D  Y  A  T  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12426  1    GGCCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCATCTTTAGCGACTATGCCACGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-23*01  47   ..T..................C..............C.......AG........T...................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  T  I  G  G  T  D  G  D  T  Y  Y  A  D  S  V  E  G  R  L  T  I  S  R  D  N  S  
                    Query_12426  91   AGTGGGTCGCAACTATCGGTGGTACTGATGGTGACACATACTACGCAGACTCTGTGGAGGGTCGGCTCACCATCTCCAGAGACAATTCCA  180
V  90.0% (225/250)  IGHV3-23*01  137  ........T..G....TA......G..G....AG..................C...A....C...T........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  M  D  D  T  A  V  Y  Y  C  A  K  D  E  G  L  P  F  L  
                    Query_12426  181  AGAACACACTCTATCTGCAAATGAACAGCCTGAGGATGGACGACACGGCCGTATATTACTGTGCGAAAGATGAAGGGTTACCATTTTTGG  270
V  90.0% (225/250)  IGHV3-23*01  227  .......G..G.......................AGCC..G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.0% (19/20)    IGHD3-3*01   4    -----------------------------------------------------------------------------....G........  16

                                      ---------------->                                  
                                      E  W  F  F  E  Y  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_12426  271  AGTGGTTCTTTGAGTACTGGGGCCAGGGAACCGTGGTCACCGTCTCCTCAG  321
D  95.0% (19/20)    IGHD3-3*01   17   .......--------------------------------------------  23
J  95.5% (42/44)    IGHJ4*02     5    -------......C..................C..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_320961

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           350     8e-99
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGAGA	TCGGGGA	AG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGAGATCGGGGAAGACTACTTTAACTAC	ARAEIGEDYFNY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  N  W  I  R  Q  L  P  G  K  G 
                    Query_12427  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAACTGGATCCGCCAGCTCCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*03  49   .............................................................G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  N  Y  Y  S  G  S  S  Y  F  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_12427  91   CTGGAGTGGATTGGCTACAACTATTATAGTGGGAGCTCCTACTTCAACCCGTCCCTCAAAAGTCGAGTTACCATATCATTAGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*03  139  ..............G....T......C.........A......A...............G..................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  E  I  G  E  D  Y 
                    Query_12427  181  AAGAACCAGTTCTCCCTGCAGCTCAGCTCTGTGACTGCCGCGGACTCGGCCGTTTATTACTGTGCGAGAGCCGAGATCGGGGAAGACTAC  270
V  94.8% (237/250)  IGHV4-31*03  229  ..................A....G.....................A.......G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-10*01  14   ----------------------------------------------------------------------------.......-------  20
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  N  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12427  271  TTTAACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    ...G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_147279

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*04                                                                                           283     1e-78
IGHD3-3*01                                                                                            10.3    124  
IGHJ6*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*04	IGHD3-3*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATAAAGACCCCGGAGGGCGCC	TTTTT	CTCGTAG	TACCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATAAAGACCCCGGAGGGCGCCTTTTTCTCGTAGTACCGTGTGGCCGTC	ARIKTPEGAFFS*YRVAV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	96	18	0	84.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	214	33	0	86.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  I  A  S  G  F  T  F  S  D  F  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12428  1    GGTCCCTGAGACTCTCCTGTATAGCCTCTGGATTCACCTTCAGTGATTTTACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGC  90
V  86.6% (214/247)  IGHV3-21*04  47   ....................GC......................AGC.A..G.................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  S  S  G  T  H  T  D  Y  A  D  S  L  Q  G  R  F  T  I  A  R  D  N  A  
                    Query_12428  91   AGTGGGTGTCATCCATTAGTAGTAGTGGGACTCACACAGACTACGCAGACTCACTTCAGGGCCGATTCACCATCGCCAGAGACAACGCGA  180
V  86.6% (214/247)  IGHV3-21*04  137  .......C..................A.T.G.T...T.T..............G.GA.................T.............C.  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  R  S  L  Y  L  Q  V  N  S  L  R  T  E  D  T  G  I  Y  Y  C  A  R  I  K  T  P  E  G  A  
                    Query_12428  181  AGCGGTCTCTGTATCTCCAAGTGAACAGCCTGAGAACCGAGGACACCGGCATATATTATTGTGCGAGGATAAAGACCCCGGAGGGCGCCT  270
V  86.6% (214/247)  IGHV3-21*04  227  ..AAC..A........G...A..............G..........G.C.G.G.....C........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD3-3*01   10   -----------------------------------------------------------------------------------------.  10

                                      IMGT--------------------->                              
                                      F  F  S  *  Y  R  V  A  V  W  G  Q  G  S  T  V  A  V  S 
                    Query_12428  271  TTTTCTCGTAGTACCGTGTGGCCGTCTGGGGCCAAGGGTCCACGGTCGCCGTCTCC  326
D  100.0% (5/5)     IGHD3-3*01   11   ....----------------------------------------------------  14
J  88.9% (40/45)    IGHJ6*02     15   -----------...G..A...A................A........A........  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_182109

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           299     2e-83
IGHD5-12*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAGA	TGGCTACAATTAC	AGTCAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGATGGCTACAATTACAGTCAGGACTAC	ARLDGYNYSQDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	217	26	0	89.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  K  G  G  S  F  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_12429  1    ACCCTGTCCCTCACCTGCGCTGTTAAAGGTGGGTCCTTCAATCATTTCTACTGGAGTTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  89.3% (217/243)  IGHV4-34*01  49   .......................CT.T.............G.GG..A.........C............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  K  Y  N  P  S  L  E  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_12429  91   TGGATTGGCGAAATCAATCACAGTGGACGCACCAAGTACAACCCGTCCCTCGAGAGTCGAGTCACCATCTCATTGGACACCTCCAAAAAC  180
V  89.3% (217/243)  IGHV4-34*01  139  ........G...........T......A.......C...............A................A...G.A.....G.....G...  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  K  L  K  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  D  G  Y  N  Y  S  Q  D 
                    Query_12429  181  CACTTCTCCCTGAAACTGAAGTCTGTCACCGCCGCGGACACGGCTCTTTATTACTGTGCGAGACTAGATGGCTACAATTACAGTCAGGAC  270
V  89.3% (217/243)  IGHV4-34*01  229  ..G...........G....GC.....G..................G.G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.3% (12/13)    IGHD5-12*01  11   --------------------------------------------------------------------.......G.....---------  23
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       Y  W  G  K  G  T  L  V  T  V  S  S  
                    Query_12429  271  TACTGGGGCAAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   .........C...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_182108

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHD2-2*01                                                                                            23.8    0.011
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	TACGGTGGAG	TTGTAGTAGGAACAGCTG	ACCGAAACGAAG	TGGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGATACGGTGGAGTTGTAGTAGGAACAGCTGACCGAAACGAAGTGGGCGTC	GRYGGVVVGTADRNEVGV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  N  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12430  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACTTTCAGTAATTATAGTATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  92.3% (229/248)  IGHV3-21*01  47   .....................C...............C.......GC.....C..........................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  S  K  K  Y  Y  A  G  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_12430  91   AGTGGGTCTCATCCATTAGTAGTCGTAGTAGTAAGAAATACTATGCAGGCTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  92.3% (229/248)  IGHV3-21*01  137  .......................A........T.C.T......C....A......................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  F  L  H  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  G  R  Y  G  G  V  V  V  G  
                    Query_12430  181  AGAATTCGCTGTTTCTGCACATGAACAGCCTGCGAGCCGAGGACACGGCTGTGTATTACTGTGGGAGATACGGTGGAGTTGTAGTAGGAA  270
V  92.3% (229/248)  IGHV3-21*01  227  ....C..A....A......A............A..............................C....----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD2-2*01   7    ------------------------------------------------------------------------------.........T.C  18

                                      IMGT--------------------->                                 
                                      T  A  D  R  N  E  V  G  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12430  271  CAGCTGACCGAAACGAAGTGGGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  88.9% (16/18)    IGHD2-2*01   19   ......-----------------------------------------------------  24
J  97.6% (40/41)    IGHJ6*02     22   ------------------...A.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_31488

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           353     9e-100
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACCTTGACTAC	ARRGYSYGYYYLDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	242	234	8	0	96.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_12431  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  96.7% (234/242)  IGHV4-59*01  50   .....TCC...A....C.........................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N  
                    Query_12431  94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCTATAGACACGTCCAAGAACC  183
V  96.7% (234/242)  IGHV4-59*01  140  ......................................................................AG..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y  
                    Query_12431  184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTACC  273
V  96.7% (234/242)  IGHV4-59*01  230  ..........................................................G...----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (20/20)   IGHD5-18*01  1    ---------------------------------------------------------------....................-------  20
J  97.9% (47/48)    IGHJ4*02     1    ------------------------------------------------------------------------------------.....T  6

                                      ------->                                  
                                      L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12431  274  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.9% (47/48)    IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_182103

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           305     3e-85
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TCGGGA	TGGCTACAATT	TTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATCGGGATGGCTACAATTTTCTTGACTCC	ARDRDGYNFLDS	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	43	8	0	84.3
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	223	28	0	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  L  I  N  G  G  N  Y  W  S  W  I  R  Q  R  P  G  K  E 
                    Query_12432  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCCTCATCAATGGCGGTAACTACTGGAGTTGGATCCGCCAGCGCCCGGGGAAGGAG  90
V  88.8% (223/251)  IGHV4-31*03  49   ...............................G....A...G..G...T...T..........C.............A...A.......GC  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  T  Y  Y  S  G  K  T  Q  Y  N  P  S  L  K  G  R  L  T  I  S  P  D  T  S 
                    Query_12432  91   TTGGAGTGGATTGGCTATACCTATTACAGTGGGAAGACCCAGTACAACCCGTCCCTCAAGGGTCGACTCACCATATCACCTGACACGTCT  180
V  88.8% (223/251)  IGHV4-31*03  139  C.............G..C.T..............GC...T.C..................A.....G.T.........GTA.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  D  R  D  G  Y  N  F 
                    Query_12432  181  AAGAACCAGTTCTCCCTGAAGCTGAGTTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGATCGGGATGGCTACAATTTT  270
V  88.8% (223/251)  IGHV4-31*03  229  ..........................C...............................A.........A..-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD5-12*01  11   -----------------------------------------------------------------------------.......G...--  21

                                      -------->                                  
                                       L  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_12432  271  CTTGACTCCTGGGGCCAGGGGATCCTGGTCACCGTCTCCTCAG  313
J  92.9% (39/42)    IGHJ4*02     7    -......A............A.C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_182102

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD4-17*01                                                                                           14.1    8.5  
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGAATAC	AG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGAATACAGCAACTGGGTCGACCCC	ARDSGEYSNWVDP	250	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	135	27	19	2	6	70.4
FR3-IMGT	136	249	114	105	9	0	92.1
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	233	18	6	90.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  V  S  S  G  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_12433  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCGTCAGCAGTGGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGG  90
V  90.7% (233/257)  IGHV4-61*01  49   ...................C...........G.............................G...........................A  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  H  I  Y  N  Y  N  R  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D 
                    Query_12433  91   CTGGAGTGGATCGGTCATATCTATAACTATAACAGAGGGAGCACCAATTATAATCCCTCCCTCCAAAGTCGAGTCACCATATCAGTAGAC  180
V  90.7% (233/257)  IGHV4-61*01  139  ...........T..GT........T..------..T...........C..C..C.........A.G........................  222
                                       L  E  W  I  G  Y  I  Y  Y        S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------CDR3-I
                                       T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  G  E  Y 
                    Query_12433  181  ACATCCAAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATTCCGGTGAATAC  270
V  90.7% (233/257)  IGHV4-61*01  223  ..G........................C...G...........................G.................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  90.0% (9/10)     IGHD4-17*01  7    --------------------------------------------------------------------------------......C...  16

                                      MGT-------------->                                  
                                       S  N  W  V  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12433  271  AGCAACTGGGTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  98.0% (49/50)    IGHJ5*02     2    --.......T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_182101

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           357     1e-100
IGHD1-7*01                                                                                            14.1    8.5   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGGG	TGGAACT	TACTACCCCCTAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGGGTGGAACTTACTACCCCCTATACTACCTTGACTAC	ARDRGGTYYPLYYLDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12434  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTCGTTATGAAATGAACTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-48*03  47   ............................................A...............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  S  S  G  G  I  V  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_12434  91   AGTGGCTTTCATACATTAGTAGTAGTGGTGGTATCGTATATTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (239/250)  IGHV3-48*03  137  .....G.......................A...C.A....C................A................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  N  L  Q  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  R  G  G  T  Y  Y  
                    Query_12434  181  AGAACTCACTGAATCTGCAAATGGACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGAGATCGGGGTGGAACTTACTACC  270
V  95.6% (239/250)  IGHV3-48*03  227  ...........T...........A............C.................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-7*01   9    ----------------------------------------------------------------------------.......-------  15

                                      T------------------>                                  
                                      P  L  Y  Y  L  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_12434  271  CCCTATACTACCTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  324
J  95.8% (46/48)    IGHJ4*02     1    ------.....T...............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_182100

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*02                                                                                           349     2e-98
IGHD3-22*01                                                                                           44.9    5e-09
IGHJ5*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*02	IGHD3-22*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CC	TATCACTATGATACTAGTGGTTATTACTA	N/A	CGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCTATCACTATGATACTAGTGGTTATTACTACGACTCC	ARAYHYDTSGYYYDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  I  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12435  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCATAAGTAACTATGGTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  94.8% (236/249)  IGHV3-64*02  47   ......................................T.C....G.....C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  R  N  G  D  R  T  Y  Y  G  D  S  V  E  G  R  F  T  I  S  R  D  N  S  
                    Query_12435  91   AATATGTTTCAGCTATTAGTCGTAATGGGGATCGCACATATTATGGAGACTCTGTGGAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (236/249)  IGHV3-64*02  137  ....................A.........G.A............C..........A.................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  V  Y  L  Q  M  G  S  L  R  P  E  D  M  A  V  Y  Y  C  A  R  A  Y  H  Y  D  T  S  
                    Query_12435  181  AGAACACGGTGTATCTTCAGATGGGCAGCCTGAGACCTGAGGACATGGCTGTATATTACTGTGCGAGAGCCTATCACTATGATACTAGTG  270
V  94.8% (236/249)  IGHV3-64*02  227  ........C..........A...............G................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  93.1% (27/29)    IGHD3-22*01  2    -----------------------------------------------------------------------...T.........G.....  20

                                      ---------------->                                  
                                      G  Y  Y  Y  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12435  271  GTTATTACTACGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  93.1% (27/29)    IGHD3-22*01  21   ..........-----------------------------------------  30
J  97.6% (40/41)    IGHJ5*01     11   ----------...............A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_182107

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           310     1e-86
IGHD3-3*01                                                                                            10.3    119  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGACACAG	TTTTT	AGTTTCCAC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACACAGTTTTTAGTTTCCACTTCGACCCC	ARVDTVFSFHFDP	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  F  F  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_12436  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGCGGTAGTTTCTTTTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  89.6% (224/250)  IGHV4-61*01  49   .........................................C..T.......A..AC....G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  A  Y  I  S  Y  S  G  R  T  K  S  N  P  S  L  K  S  R  V  T  M  S  I  D  T  S 
                    Query_12436  91   CTGGAATGGCTTGCCTATATCTCTTACAGTGGGAGAACCAAGTCTAATCCCTCTCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCC  180
V  89.6% (224/250)  IGHV4-61*01  139  .....G...A...GG.......A............C.....C.AC..C.....C....................A...G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  V  D  T  V  F  S  F 
                    Query_12436  181  AAGAACCAATTCTCCCTGAGGCTGACTTCCGTGACCGCTGCGGACACGGCCGTTTATTTCTGTGCGAGAGTGGACACAGTTTTTAGTTTC  270
V  89.6% (224/250)  IGHV4-61*01  229  ........G..........A.....GC..T.......................G....A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-3*01   10   -------------------------------------------------------------------------------.....------  14

                                      ----------->                                  
                                       H  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12436  271  CACTTCGACCCCTGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ5*02     9    ---.......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_182105

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHD3-9*01                                                                                            12.2    31    
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGA	ATATTT	CCCACGAGGATTTCAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGACGAATATTTCCCACGAGGATTTCAGTAC	VRDEYFPRGFQY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12437  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGGCTACTGGATGCACTGGGTCCGCCAAGCACCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-74*01  47   ............................................A............................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  I  I  D  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12437  91   TGTGGGTCTCACGTATTAATAGTGATGGGAGTATCATAGACTCCGCGGATTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-74*01  137  .................................G..C.AG..A......C........................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  E  Y  F  P  R  G  
                    Query_12437  181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGTAAGAGACGAATATTTCCCACGAGGAT  270
V  96.0% (240/250)  IGHV3-74*01  227  .......G.......................................................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-9*01   9    -------------------------------------------------------------------------......-----------  14

                                      ------->                                  
                                      F  Q  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12437  271  TTCAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (37/37)   IGHJ4*02     12   -----.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_209416

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         316     2e-88
IGHD2-15*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCCCTCAG	ATTGTAGTG	ATGACAGGTGCAACAACGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCCCTCAGATTGTAGTGATGACAGGTGCAACAACGCGTTTGACTAC	ARGPSDCSDDRCNNAFDY	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	26	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  S  L  T  C  A  V  S  G  F  S  I  S  R  G  Y  F  W  G  W  I  R  Q  P  P  G  K  G  L  
                    Query_12438    2    CCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCAGCAGGGGTTATTTCTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTGG  91
V  91.4% (223/244)  IGHV4-38-2*01  50   ..............................A............T.....C.A......................................  139
                                           L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  A  S  I  Y  H  N  G  A  A  F  S  T  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  
                    Query_12438    92   AGTGGATTGCAAGTATCTATCATAATGGGGCCGCCTTCTCCACCCCGTCCCTCAAGAGTCGGGTCACCATATCAGTTGACACGTCCAAGA  181
V  91.4% (223/244)  IGHV4-38-2*01  140  .........GG.............G....AG.A...A..A..A..................A..............A.............  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><----------------------CDR3-IMG
                                        N  Q  F  S  L  K  V  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  G  P  S  D  C  S  D  D  
                    Query_12438    182  ACCAGTTCTCCCTGAAGGTGACGTCTGTGACTGCCGCAGACACGGCCTTATATTACTGTGCGAGGGGCCCCTCAGATTGTAGTGATGACA  271
V  91.4% (223/244)  IGHV4-38-2*01  230  .................C...GC........C...............G.G..............--------------------------  293
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                             
D  100.0% (9/9)     IGHD2-15*01    6    ---------------------------------------------------------------------------.........------  14

                                        T--------------------->                                  
                                        R  C  N  N  A  F  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_12438    272  GGTGCAACAACGCGTTTGACTACTGGGGCCAGGGAACACTGGTCATCGTCTCCTCAG  328
J  95.3% (41/43)    IGHJ4*02       6    --------------.......................C.......C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_230958

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD2-8*02                                                                                            12.2    32   
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGA	GTACTG	CCACCGAGTCTAGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGAGTACTGCCACCGAGTCTAGGTGGTTCGACCCC	ARDQSTATESRWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12439  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   .......................................................G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  H  S  G  T  T  Q  Y  N  P  S  L  K  S  R  V  T  I  S  M  D  T  S  K  K 
                    Query_12439  91   TGGATTGGTTACATCCATCACAGTGGGACCACCCAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATGGACACGTCCAAGAAG  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G..T...T..T.........G....A.C....................................G.A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  S  T  A  T  E  S  R 
                    Query_12439  181  CAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTTTATTATTGTGCGAGAGATCAGAGTACTGCCACCGAGTCTAGG  270
V  93.5% (229/245)  IGHV4-59*01  229  .............A......C...........T..............G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-8*02   9    ----------------------------------------------------------------------......--------------  14

                                      ----------->                                  
                                       W  F  D  P  W  G  H  G  T  L  V  T  V  S  S  
                    Query_12439  271  TGGTTCGACCCCTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.8% (45/46)    IGHJ5*02     6    ....................G.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_230959

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           315     5e-88
IGHD2-21*02                                                                                           31.5    5e-05
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCGT	GCATTTTGTGGTGATGACTGCT	TCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGTGCATTTTGTGGTGATGACTGCTTCCCCTTTGACTAC	ARRAFCGDDCFPFDY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	221	20	0	91.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  F  N  I  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_12440  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCTTCAACATTTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  91.7% (221/241)  IGHV4-59*08  50   .....TCC...A....C..................A...GT.G............C..................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  S  Y  S  G  T  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  S  S  K  N  
                    Query_12440  94   GGATTGGGTATATCTCTTACAGTGGGACCACCAACTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGTAGACTCGTCCAAGAATC  183
V  91.7% (221/241)  IGHV4-59*08  140  ...............A...........G......................A..........................A..........C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  V  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  R  A  F  C  G  D  D  C  F  
                    Query_12440  184  AGGTCTCCCTGAAACTGACCTCTGTGACCGCCGCAGACACGGCCATATATTACTGTGCGAGGCGTGCATTTTGTGGTGATGACTGCTTCC  273
V  91.7% (221/241)  IGHV4-59*08  230  ..T..........G....G.........................G.G..............-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  90.9% (20/22)    IGHD2-21*02  2    -----------------------------------------------------------------....A........G........---  23

                                      ---------->                                  
                                      P  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_12440  274  CCTTTGACTACTGGGGCCAGGGAGCCCTGGTTACCGTCTCCTCAG  318
J  95.5% (42/44)    IGHJ4*02     5    -......................A.......C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_100226

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           343     2e-96
IGHD6-19*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CCGGGGAAA	ATAGCGGTGGCTGGT	TACCGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCCGGGGAAAATAGCGGTGGCTGGTTACCGGTTGACTAC	AKAGENSGGWLPVDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  S  T  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12441  1    GGTCCCTGAGACTCTCCTGTGCTGCCTCTGGATTCATGTTCAGTACTTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-30*18  47   ......................A.............CC.......GC.A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  F  D  G  S  N  S  Y  Y  A  D  S  V  K  G  R  L  T  I  S  R  D  N  S  
                    Query_12441  91   AGTGGGTGGCAGTTATATCATTTGATGGAAGTAATAGTTATTATGCAGACTCCGTGAAGGGCCGATTGACCATCTCCAGAGACAATTCCA  180
V  94.0% (234/249)  IGHV3-30*18  137  .....................A..............AA..C..........................C......................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  G  E  N  S  G  G  
                    Query_12441  181  AGAACACACTGTTTCTGCAAATGAACAGCCTGAGAGCTGAAGACACGGCTGTTTATTACTGTGCGAAAGCCGGGGAAAATAGCGGTGGCT  270
V  94.0% (234/249)  IGHV3-30*18  227  .......G....A...........................G...........G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (14/15)    IGHD6-19*01  5    ------------------------------------------------------------------------------.....A......  16

                                      ---------------->                                  
                                      W  L  P  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12441  271  GGTTACCGGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  93.3% (14/15)    IGHD6-19*01  17   ...------------------------------------------------  19
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_230954

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD1-26*01                                                                                           23.8    0.012 
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGTATGCCGTCC	TGGGAGCTACTA	GT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTATGCCGTCCTGGGAGCTACTAGTTGGTTCGACCCC	AKYAVLGATSWFDP	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	268	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  E  P  G  E  S  L  R  I  S  C  R  G  S  G  Y  T  F  I  S  Y
                    Query_12442  1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAGAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGCTCTGGGTACACCTTTATTAGTTA  90
V  93.4% (268/287)  IGHV5-51*01  6    ....................C..........A..................A...........A...T.....A....G.....CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  N  P
                    Query_12442  91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGAGACCAGATACAACCC  180
V  93.4% (268/287)  IGHV5-51*01  96   C.......G...........................................A......................T..........G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  L  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  S  L  K  A  S  D  T  A
                    Query_12442  181  GTCCTTCCAAGGCCACGTCACCCTCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCACTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (268/287)  IGHV5-51*01  186  ...............G......A.....................G...............G.............................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  K  Y  A  V  L  G  A  T  S  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_12442  271  CATGTATTACTGTGCGAAGTATGCCGTCCTGGGAGCTACTAGTTGGTTCGACCCCTGGGGCCAGGGAACCCTAGTCATCGTCTCCTCAG  359
V  93.4% (268/287)  IGHV5-51*01  276  .................------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                          
D  100.0% (12/12)   IGHD1-26*01  8    -----------------------------............------------------------------------------------  19
J  95.7% (44/46)    IGHJ5*02     6    -------------------------------------------.............................G....C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_230955

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           375     3e-106
IGHD6-19*01                                                                                           12.2    34    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	GCTCCAG	GGCTGG	GATT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCCAGGGCTGGGATTCTTTGACTAT	AAPGLGFFDY	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	263	23	0	92


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  A  S  G  N  T  L  T  N  N
                    Query_12443  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCGTCAGTGAAAGTTGCCTGCAAGGCATCCGGAAACACCCTCACCAACAA  90
V  92.0% (263/286)  IGHV1-46*01  6    ..........................................C........G...T.............T...T.....T......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  N  K  T  T  Y  A  Q
                    Query_12443  91   CTTCATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTAATAAGACAACCTATGCACA  180
V  92.0% (263/286)  IGHV1-46*01  96   ..AT..................................................................GG..GC....G...C.....  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  L  T  M  T  R  V  T  S  T  R  T  V  Y  M  E  L  S  N  L  R  S  E  D  T  A
                    Query_12443  181  GAAGTTCCAGGGCAGACTGACCATGACTAGGGTCACGTCCACGAGAACAGTCTACATGGAGCTGAGCAACCTGAGATCTGAGGACACGGC  270
V  92.0% (263/286)  IGHV1-46*01  186  ................G.C........C....A............C......................G.....................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        V  Y  Y  C  A  A  P  G  L  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_12443  271  CGTGTATTACTGCGCGGCTCCAGGGCTGGGATTCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  347
V  92.0% (263/286)  IGHV1-46*01  276  ............T...-------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                              
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------......------------------------------------------------  18
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------.........C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_117130

Length=409
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            442     2e-126
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	287	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y
                    Query_12444  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGGCTA  90
V  98.6% (287/291)  IGHV1-2*04   6    ..................G.............AG........................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q
                    Query_12444  91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCACA  180
V  98.6% (287/291)  IGHV1-2*04   96   ..........................................................................................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A
                    Query_12444  181  GAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGGC  270
V  98.6% (287/291)  IGHV1-2*04   186  ..........................................................................................  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W  G  Q
                    Query_12444  271  CGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGGGGCCA  360
V  98.6% (287/291)  IGHV1-2*04   276  ........A............---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  94.7% (18/19)    IGHD3-22*01  7    ---------------------------------...........G.......--------------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------------------....A...........................  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_12444  361  AGGGACCACGGTCACCGTCTCCTCA  385
J  98.2% (56/57)    IGHJ6*02     38   .........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40078152


Query= Query_347788

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           369     2e-104
IGHD5-12*01                                                                                           23.8    0.011 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCTGCTATCGGATTCTTT	GTGGCTACGATT	CGGGTGAGGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTGCTATCGGATTCTTTGTGGCTACGATTCGGGTGAGGGCATGGACGTC	ARLCYRILCGYDSGEGMDV	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  S  T  N  F  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_12445  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGGAGTACTAATTTCTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  97.2% (243/250)  IGHV4-39*01  49   ...............................G.........C....G..G..A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12445  91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  97.2% (243/250)  IGHV4-39*01  139  ..........................................................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  D  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  C  Y  R  I  L  C 
                    Query_12445  181  AAGGACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACTCTGCTATCGGATTCTTTGT  270
V  97.2% (243/250)  IGHV4-39*01  229  ...A.....................G............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD5-12*01  10   ----------------------------------------------------------------------------------------..  11

                                      3-IMGT----------------------->                                 
                                       G  Y  D  S  G  E  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12445  271  GGCTACGATTCGGGTGAGGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
D  100.0% (12/12)   IGHD5-12*01  12   ..........-----------------------------------------------------  21
J  100.0% (42/42)   IGHJ6*02     21   ---------------------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_207146

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            410     1e-116
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	N/A	N/A	N/A	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTACGTTATGGACGTC	ARGYVMDV	292	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	69	2	0	97.2
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	107	7	0	93.9
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	292	277	15	0	94.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  N  T  F  S  N  
                    Query_12446  8    TGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCATGTAAGGCTTCTGGAAACACCTTCAGCAATT  97
V  94.9% (277/292)  IGHV1-8*01   5    ..........................................................C..C............T.........C..G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  D  I  N  W  V  R  Q  A  A  G  Q  G  L  E  W  M  G  W  M  N  P  T  S  G  D  T  G  Y  A  
                    Query_12446  98   ATGATATCAACTGGGTGCGACAGGCCGCTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTACCAGTGGTGACACAGGCTATGCAC  187
V  94.9% (277/292)  IGHV1-8*01   95   ..........................A.......................................A.......A...............  184
                                      Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  K  G  R  V  T  M  T  R  D  A  S  I  T  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  
                    Query_12446  188  AGAAGTTTAAGGGCAGAGTCACCATGACCAGGGACGCCTCCATAACCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGG  277
V  94.9% (277/292)  IGHV1-8*01   185  .......CC.......................A..A.........G............................................  274
                                      Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-------CDR3-IMGT------>                                 
                                      A  V  Y  Y  C  A  R  G  Y  V  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12446  278  CCGTCTATTATTGTGCGAGAGGCTACGTTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  348
V  94.9% (277/292)  IGHV1-8*01   275  ....G.....C...........-------------------------------------------------  296
                                      A  V  Y  Y  C  A  R  G                                                 
J  98.0% (48/49)    IGHJ6*02     14   ----------------------.....G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_202329

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            382     3e-108
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12447  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_12447  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCTAGAGACAACGCCA  180
V  98.8% (247/250)  IGHV3-7*01   137  ..................................................................T.........C.............  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_12447  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  98.8% (247/250)  IGHV3-7*01   227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12447  271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_325212

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-28*01                                                                                           350     8e-99
IGHD1-26*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-28*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAA	TTGCATCGGTCGCGC	GTGGGAG	T	TACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGCATCGGTCGCGCGTGGGAGTTACGTTGACTAC	ARIASVARGSYVDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	56	27	26	1	0	96.3
FR2-IMGT	57	107	51	50	1	0	98
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	246	235	11	0	95.5


Alignments

                                      <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                         L  R  L  S  C  S  V  S  G  Y  S  I  S  S  N  N  W  W  G  W  I  R  Q  P  P  G  K  G  L  
                    Query_12448  4    CCCTGAGACTCTCCTGCTCTGTCTCTGGTTACTCCATCAGCAGTAATAACTGGTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGG  93
V  95.5% (235/246)  IGHV4-28*01  50   .....TCC...A.....G...........................G............................................  139
                                         L  S  L  T  C  A  V  S  G  Y  S  I  S  S  S  N  W  W  G  W  I  R  Q  P  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  I  G  S  I  S  Y  T  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  
                    Query_12448  94   AGTGGATTGGGTCCATCTCTTATACTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGA  183
V  95.5% (235/246)  IGHV4-28*01  140  ............A.....A.....G.................................................................  229
                                      E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  Q  F  S  L  K  L  R  S  V  T  A  V  D  T  A  V  Y  F  C  A  R  I  A  S  V  A  R  G  S  
                    Query_12448  184  ACCAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGTGGACACGGCCGTGTATTTCTGTGCGAGAATTGCATCGGTCGCGCGTGGGAGTT  273
V  95.5% (235/246)  IGHV4-28*01  230  ......................C...............................A...........------------------------  295
                                      N  Q  F  S  L  K  L  S  S  V  T  A  V  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD1-26*01  7    ---------------------------------------------------------------------------------.......--  13
J  97.8% (45/46)    IGHJ4*02     3    -----------------------------------------------------------------------------------------.  3

                                      ---------->                                  
                                      Y  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12448  274  ACGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.8% (45/46)    IGHJ4*02     4    ..T..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_325210

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           389     2e-110
IGHD2-21*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	ATTTTGGTGG	ATAGAGATAGAGTTCC	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTC	ARGGFWWIEIEFRMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  Y 
                    Query_12449  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACCGACTAT  91
V  93.1% (269/289)  IGHV1-18*01  7    .............................................................................C......AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  W  I  S  A  Y  T  G  N  T  K  N  A  Q 
                    Query_12449  92   GGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGATGGATCAGCGCTTACACTGGTAATACAAAAAATGCACAA  181
V  93.1% (269/289)  IGHV1-18*01  97   .......G.....................................A.....................A......C.....CT.......G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  A  Q  G  R  V  S  M  T  T  D  T  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  G  D  T  A 
                    Query_12449  182  AAAGCCCAGGGCAGAGTGTCCATGACCACAGACACATCCACGAGAACAGCCTACATGGAGTTGAGGAGCCTGAGATCGGGCGACACGGCC  271
V  93.1% (269/289)  IGHV1-18*01  187  ..GCT............CA.........................C...............C................T.A..........  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  S  C  A  R  G  G  F  W  W  I  E  I  E  F  R  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_12449  272  GTGTATTCCTGTGCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  361
V  93.1% (269/289)  IGHV1-18*01  277  .......A...........-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD2-21*01  6    -----------------------...G......---------------------------------------------------------  15
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------.........................................  59

                                         
                                       S 
                    Query_12449  362  TCA  364
J  100.0% (44/44)   IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_91146

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12450  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .......................................A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_12450  91   TGGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........G..................A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_12450  181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  95.1% (233/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  94.8% (55/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_12450  271  GTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  306
J  94.8% (55/58)    IGHJ6*02     27   .........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_325216

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           341     5e-96
IGHD2-15*01                                                                                           39.1    3e-07
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCGACCGATCCCGGG	TATTGTAGTGGTGGTTTCTGCTACTC	GGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCGACCGATCCCGGGTATTGTAGTGGTGGTTTCTGCTACTCGGCGTTTGACTAC	AATDPGYCSGGFCYSAFDY	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  S  A  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_12451  1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGCCTCCGTCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  94.3% (232/246)  IGHV4-61*01  49   ...........................G...G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  N  G  D  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  E  T  S 
                    Query_12451  91   CTGGAGTGGATTGGATATATCTATTACAATGGAGACACCAACTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGAGACGTCC  180
V  94.3% (232/246)  IGHV4-61*01  139  ..............G.............G...GAG............C...................................C......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  A  T  D  P  G  Y  C  S 
                    Query_12451  181  AAGAACCAGTTCTCCCTTAACCTGAGCTCTGTGACTGCCGCGGACACGGCCATGTATTACTGTGCGGCGACCGATCCCGGGTATTGTAGT  270
V  94.3% (232/246)  IGHV4-61*01  229  .................G..G..............C..T............G..............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  92.3% (24/26)    IGHD2-15*01  5    ---------------------------------------------------------------------------------.........  13

                                      3-IMGT----------------------->                                  
                                       G  G  F  C  Y  S  A  F  D  Y  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_12451  271  GGTGGTTTCTGCTACTCGGCGTTTGACTACTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  334
D  92.3% (24/26)    IGHD2-15*01  14   ......AG.........-----------------------------------------------  30
J  97.7% (42/43)    IGHJ4*02     6    ---------------------.........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_325217

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43D*01                                                                                          358     4e-101
IGHD1-26*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              106     3e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43D*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAA	GGCAAC	GTATAGTGGGACCTACTA	TCCGAATAG	TTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGGCAACGTATAGTGGGACCTACTATCCGAATAGTTACTACTACTACAACGCTATGGACGTC	AKATYSGTYYPNSYYYYNAMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  A  L  
                    Query_12452   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGTCAAGCTCCGGGGAAGGCTCTCG  90
V  96.4% (238/247)  IGHV3-43D*01  47   ....................................................................................G...G.  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  S  L  I  T  W  G  P  V  S  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_12452   91   AGTGGGTCTCTCTTATTACTTGGGGTCCTGTTAGCACATACTATGCAGACTCTGTGAGGGGTCGATTCACCATCTCCAGAGACAACAGCA  180
V  96.4% (238/247)  IGHV3-43D*01  137  ..................G.....A.GG..G......C...................A................................  226
                                       E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT----------------------------------------------------><---------------------------
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  A  T  Y  S  G  T  Y  
                    Query_12452   181  AAAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACCGCCTTGTATTACTGTGCAAAGGCAACGTATAGTGGGACCTACT  270
V  96.4% (238/247)  IGHV3-43D*01  227  ...................................................................-----------------------  293
                                       K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  94.4% (17/18)    IGHD1-26*01   2    -------------------------------------------------------------------------...........G.....  18

                                       -CDR3-IMGT--------------------------->                                 
                                       Y  P  N  S  Y  Y  Y  Y  N  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12452   271  ATCCGAATAGTTACTACTACTACAACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  94.4% (17/18)    IGHD1-26*01   19   .----------------------------------------------------------------------  19
J  96.7% (59/61)    IGHJ6*02      2    ----------.............T...G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_325214

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           322     2e-90
IGHD1-26*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCATACGCC	GTGGGAG	GAAGGGATACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCATACGCCGTGGGAGGAAGGGATACCCCTTGACTAC	AKDHTPWEEGIPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  L  S  R  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12453  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCATGCTTAGCAGATTTGCCATGAGTTGGGTCCGCCAGGCCCCTGGGAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-23*01  47   ............................T.......CCT.......C.A.........C..............T..A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  D  N  T  Y  Y  A  D  S  L  K  G  Q  F  S  I  S  R  D  S  S  
                    Query_12453  91   AGTGGGTCTCAGGTATCAGCGGAAGTGGTGATAACACATATTATGCAGACTCCTTGAAGGGCCAGTTCTCCATCTCCAGAGACAGTTCCA  180
V  91.2% (228/250)  IGHV3-23*01  137  ............C...T..T..T.......G..G......C..C.........G.........G....A...............A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  H  T  P  W  E  E  
                    Query_12453  181  AGAACACGCTGTATCTGCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCATACGCCGTGGGAGGAAG  270
V  91.2% (228/250)  IGHV3-23*01  227  ......................G...............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD1-26*01  7    -------------------------------------------------------------------------------.......----  13

                                      ---------------->                                  
                                      G  I  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12453  271  GGATACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_325215

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD1-26*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGCAGGTGGAGCATATGTCTGG	GGGAGCTCCTA	N/A	TGACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGCAGGTGGAGCATATGTCTGGGGGAGCTCCTATGACAAG	AKAGGAYVWGSSYDK	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	229	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  V  S  S  H  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12454  1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCACCGTTAGCAGCCATGCCATGAACTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (229/247)  IGHV3-23*01  47   .......................G..............T........T.........G.........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  S  D  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12454  91   AGTGGGTCTCAAGTATTAGTGGAAGTGGGAGTGACACTAACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.7% (229/247)  IGHV3-23*01  137  ...........GC.........T.....TG..AG...AT...................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  K  T  L  Y  L  Q  M  T  S  L  R  A  E  D  T  A  R  Y  Y  C  A  K  A  G  G  A  Y  V  W  
                    Query_12454  181  AGAAGACGCTGTATCTGCAAATGACCAGCCTGAGAGCCGAGGACACGGCCAGATATTACTGTGCGAAGGCAGGTGGAGCATATGTCTGGG  270
V  92.7% (229/247)  IGHV3-23*01  227  ....C...................A.........................GT...............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.9% (10/11)    IGHD1-26*01  9    -----------------------------------------------------------------------------------------.  9

                                      ---------------->                                  
                                      G  S  S  Y  D  K  W  G  P  G  T  Q  V  T  V  S  S  
                    Query_12454  271  GGAGCTCCTATGACAAGTGGGGCCCGGGAACCCAGGTCACCGTCTCCTCAG  321
D  90.9% (10/11)    IGHD1-26*01  10   ......A...-----------------------------------------  19
J  90.2% (37/41)    IGHJ4*02     8    ----------....T.C.......A........T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_246467

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            424     8e-121
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	G	GGGTAT	GACGCTCCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGTATGACGCTCCGTTTGAGTAC	ARGGYDAPFEY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	281	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_12455  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTA  90
V  96.6% (281/291)  IGHV1-8*01   6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  N  W  V  R  Q  A  T  G  Q  G  L  V  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_12455  91   TTATATCAACTGGGTGCGGCAGGCCACAGGACAAGGGCTTGTCTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACA  180
V  96.6% (281/291)  IGHV1-8*01   96   .G................A........T.............AG...............................................  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  V  T  G  D  T  S  I  S  T  V  Y  M  E  L  S  S  L  K  S  E  D  T  A
                    Query_12455  181  GAAGTTCCAGGGCAGAGTCACCGTGACCGGGGACACCTCCATAAGCACAGTCTACATGGAGCTGAGCAGCCTGAAATCTGAGGACACGGC  270
V  96.6% (281/291)  IGHV1-8*01   186  ......................A.....A..A..................C.......................G...............  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        V  Y  Y  C  A  R  G  G  Y  D  A  P  F  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12455  271  CGTGTATTACTGTGCGAGAGGGGGGTATGACGCTCCGTTTGAGTACTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  350
V  96.6% (281/291)  IGHV1-8*01   276  .....................-----------------------------------------------------------  296
                                        V  Y  Y  C  A  R  G                                                           
D  100.0% (6/6)     IGHD6-13*01  1    ----------------------......----------------------------------------------------  6
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------.....C....................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_325218

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           417     6e-119
IGHD6-19*01                                                                                           33.4    2e-05 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTGGGCCCC	GGGTATAGCCGTGGCTGGTA	TGCTTGGTTTCTATGC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTGGGCCCCGGGTATAGCCGTGGCTGGTATGCTTGGTTTCTATGCTATGGACGTC	ARDWAPGIAVAGMLGFYAMDV	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_12456  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTA  90
V  95.9% (279/291)  IGHV1-46*01  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  M  I  N  P  S  D  S  T  T  R  Y  A  Q
                    Query_12456  91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATGATCAACCCTAGTGATAGTACCACAAGGTACGCACA  180
V  95.9% (279/291)  IGHV1-46*01  96   ......................................................A.............G.G...G......C........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  L  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Q  M  D  L  S  S  L  T  S  E  D  T  A
                    Query_12456  181  GAAGTTCCTGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCCAGATGGACCTGAGCAGCCTGACATCTGAGGACACGGC  270
V  95.9% (279/291)  IGHV1-46*01  186  ........A...........................................T.C.....G.............G...............  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        M  Y  Y  C  A  R  D  W  A  P  G  I  A  V  A  G  M  L  G  F  Y  A  M  D  V  W  G  Q  G  T
                    Query_12456  271  CATGTATTACTGTGCGAGAGATTGGGCCCCGGGTATAGCCGTGGCTGGTATGCTTGGTTTCTATGCTATGGACGTCTGGGGCCAAGGGAC  360
V  95.9% (279/291)  IGHV1-46*01  276  .G...................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  95.0% (19/20)    IGHD6-19*01  1    ------------------------------.........A..........----------------------------------------  20
J  100.0% (43/43)   IGHJ6*02     20   ------------------------------------------------------------------........................  43

                                                         
                                        T  V  T  V  S  S 
                    Query_12456  361  CACGGTCACCGTCTCCTCA  379
J  100.0% (43/43)   IGHJ6*02     44   ...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_91149

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           378     3e-107
IGHD7-27*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGTCCTTTTACC	AACTGGGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGTCCTTTTACCAACTGGGGTTGACTTT	QSFYQLGLT	280	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	66	67	63	3	1	94
CDR1-IMGT	67	90	24	21	3	0	87.5
FR2-IMGT	91	141	51	48	3	0	94.1
CDR2-IMGT	142	165	24	23	1	0	95.8
FR3-IMGT	166	279	114	107	7	0	93.9
CDR3-IMGT (germline)	280	281	2	2	0	0	100
Total	N/A	N/A	282	264	17	1	93.6


Alignments

                                      <----------------------------FR1-IMGT-----------------------------><-------CDR1-IMGT------
                                        Q  V  Q   L  V  Q  R  *  K  S  R  G  S  L  *  R  S  P  V  R  V  L  D  T  A  L  P  T  T  
                    Query_12457  1    GCAGGTGCAG-CTGGTGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACAGCTTTACCAACTACTT  89
V  93.6% (264/282)  IGHV5-51*03  9    ..T.......T....A..........................................A........................G.....G  98
                                        L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W

                                      ><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-------------
                                      S  S  A  G  C  A  R  G  P  G  K  A  W  S  G  W  G  S  F  I  L  V  T  L  I  P  G  T  T  R  
                    Query_12457  90   CATCGGCTGGGTGCGCCAGAGGCCCGGGGAAGGCCTGGAGTGGATGGGGCTCATTTATCCTGGTGACTCTGATACCAGGTACAACTCGTC  179
V  93.6% (264/282)  IGHV5-51*03  99   G...................T.......A....................A....C.......................A....G.C....  188
                                        I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                      P  S  K  A  T  S  P  S  Q  P  T  S  P  S  T  P  P  T  C  S  G  A  A  *  R  P  R  T  P  P  
                    Query_12457  180  CTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGCCAT  269
V  93.6% (264/282)  IGHV5-51*03  189  ............G............................G..........C.....................................  278
                                        F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M

                                      ---------><----------CDR3-IMGT--------->                                  
                                      F  I  T  V  Q  S  F  Y  Q  L  G  L  T  F  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_12457  270  TTATTACTGTGCAGTCCTTTTACCAACTGGGGTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  343
V  93.6% (264/282)  IGHV5-51*03  279  G...........--------------------------------------------------------------  290
                                        Y  Y  C  A                                                              
D  100.0% (8/8)     IGHD7-27*01  3    ------------------------........------------------------------------------  10
J  95.2% (40/42)    IGHJ4*02     7    --------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_91148

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           383     1e-108
IGHD3-16*01                                                                                           14.1    9.5   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACAAGCGGGCGGCACC	TTTGGGG	CGAGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTAC	ARGQAGGTFGASDY	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	71	4	0	94.7
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	46	5	0	90.2
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	104	10	0	91.2
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	270	25	0	91.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  S  F  N 
                    Query_12458  3    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAATGAAGGTCTCCTGCAAGGCTTCCGGTTACAGCTTTAAC  92
V  91.5% (270/295)  IGHV1-18*01  1    .....T.....G.......................................G......................T.......C.....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  G  I  T  W  M  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  A  Y  N  G  N  T  K  Y 
                    Query_12458  93   GACTATGGTATCACTTGGATGCGACAGGCCCCTGGACAGGGGCCTGAGTGGATGGGATGGATCAGCGCATATAATGGTAACACAAAGTAT  182
V  91.5% (270/295)  IGHV1-18*01  91   AG...........GC...G...................A....T........................T..C..............C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  E  R  L  Q  G  R  L  I  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_12458  183  TCAGAGAGGCTCCAGGGCAGACTCATCATGACCACAGACACATCCACGAGCACAGCCTACATGGAATTGAGGAGCCTGAGATCTGACGAC  272
V  91.5% (270/295)  IGHV1-18*01  181  G..C...A.............G...C.......................................GC.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  G  Q  A  G  G  T  F  G  A  S  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_12458  273  ACGGCCGTCTATTATTGTGCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  362
V  91.5% (270/295)  IGHV1-18*01  271  ........G.....C..........-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD3-16*01  15   ------------------------------------------.......-----------------------------------------  21
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------------------....................................  44

                                          
                                       S  
                    Query_12458  363  TCAG  366
J  100.0% (40/40)   IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_187687

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           322     2e-90
IGHD1-26*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGC	ATAGTGGGAGCTACT	TGT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGCATAGTGGGAGCTACTTGTACTTCTTTGACTAC	ARLHSGSYLYFFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  T  S  G  F  T  V  I  N  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12459  1    GGTCCCTGAGACTCTCCTGTTCGACCTCTGGATTCACCGTCATTAATAATTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.2% (225/244)  IGHV3-53*01  47   ....................G.AG.......G..........G..GC..C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  Y  T  N  G  R  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_12459  91   AGTGGGTCTCAGCCATTTATACCAATGGTCGCACATTCTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGA  180
V  92.2% (225/244)  IGHV3-53*01  137  ............TT.......G.GG....A......A........................A............................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  E  M  N  S  L  R  A  A  D  T  A  V  Y  Y  C  A  R  L  H  S  G  S  Y  L  Y  
                    Query_12459  181  ACACGCTGTATCTTGAAATGAACAGCCTGAGAGCCGCGGACACGGCCGTGTATTATTGTGCGAGGCTGCATAGTGGGAGCTACTTGTACT  270
V  92.2% (225/244)  IGHV3-53*01  227  ..............C.....................A..................C........--------------------------  290
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  100.0% (15/15)   IGHD1-26*01  4    ---------------------------------------------------------------------...............------  18
J  93.8% (45/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      F  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_12459  271  TCTTTGACTACTGGGGCCAGGGGGCCCTGGTCACCGTCTCCTCAG  315
J  93.8% (45/48)    IGHJ4*02     4    A.....................AA.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_105576

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           333     1e-93
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ5*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGAGGAG	TATTGTAATAGTA	AAGGCTGCTTTCCGTC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGAGGAGTATTGTAATAGTAAAGGCTGCTTTCCGTCCTGGTTCGGCCCC	ARAEEYCNSKGCFPSWFGP	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  N  M  I  W  I  R  Q  A  P  G  K  G  L  
                    Query_12460  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAATATGATCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-21*01  47   ............................................AG.....GC....A....G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  C  I  S  S  S  S  N  Y  I  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  P  
                    Query_12460  91   AGTGGGTCGCATGCATTAGTAGTAGTAGTAACTACATATACTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACCCCA  180
V  92.8% (231/249)  IGHV3-21*01  137  ........T...C.................GT.....................G................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  A  G  I  Y  Y  C  A  R  A  E  E  Y  C  N  S  
                    Query_12460  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACGCGGGTATATATTACTGCGCGAGAGCGGAGGAGTATTGTAATAGTA  270
V  92.8% (231/249)  IGHV3-21*01  227  ........................................G...A...C.G.G........T.......---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD2-2*01   5    -----------------------------------------------------------------------------.......G.....  17

                                      -IMGT----------------------->                                  
                                      K  G  C  F  P  S  W  F  G  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12460  271  AAGGCTGCTTTCCGTCCTGGTTCGGCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
J  97.9% (46/47)    IGHJ5*02     5    ----------------........A......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_105575

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            366     2e-103
IGHD3-3*01                                                                                            35.3    4e-06 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGTAGTCAAG	ACGATTTTTGGAGTGGTT	TGTTCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTAGTCAAGACGATTTTTGGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTC	ARDGSQDDFWSGLFHYYYGMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  M  S  W  V  R  Q  P  P  G  K  G  L  
                    Query_12461  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGGTATTGGATGAGTTGGGTCCGCCAACCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-7*03   47   ..............................................C...........C...........GG..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_12461  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (242/250)  IGHV3-7*03   137  ........................................................A.................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  V  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  Q  D  D  F  
                    Query_12461  181  AGAACTCAGTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAGAGATGGTAGTCAAGACGATTTTT  270
V  96.8% (242/250)  IGHV3-7*03   227  ........C........C..................................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-3*01   6    ---------------------------------------------------------------------------------.........  14

                                      -CDR3-IMGT--------------------------->                                 
                                      W  S  G  L  F  H  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12461  271  GGAGTGGTTTGTTCCACTACTATTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  100.0% (18/18)   IGHD3-3*01   15   .........--------------------------------------------------------------  23
J  96.4% (54/56)    IGHJ6*02     7    ---------------.......C..C.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_187684

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           411     4e-117
IGHD7-27*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	TCTGGGA	AACTGGGG	TAGGA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATCTGGGAAACTGGGGTAGGAGACTAC	AIWETGVGDY	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	275	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  R  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  R  S  Y
                    Query_12462  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAGGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGGAGCTA  90
V  95.8% (275/287)  IGHV1-69*01  6    ..................G.............A...................................................C.....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  G  I  I  P  L  F  R  T  P  N  Y  A  Q
                    Query_12462  91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGAGGGATCATCCCTCTCTTTCGGACACCAAACTACGCACA  180
V  95.8% (275/287)  IGHV1-69*01  96   ..............................................A.................A.....G.T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  Q  L  S  S  L  R  S  E  D  T  A
                    Query_12462  181  GAAGTTCCAGGACAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGCAACTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.8% (275/287)  IGHV1-69*01  186  ...........G..............................................G.G.............................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        V  Y  Y  C  A  I  W  E  T  G  V  G  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_12462  271  CGTATATTACTGTGCGATCTGGGAAACTGGGGTAGGAGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  347
V  95.8% (275/287)  IGHV1-69*01  276  ...G.............------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                              
D  100.0% (8/8)     IGHD7-27*01  3    ------------------------........---------------------------------------------  10
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------...........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_51787

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     2e-102
IGHD2-15*01                                                                                           37.2    1e-06 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGACTCCC	GGATATTGTCGTGGTGGTAGGTGCT	CCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGACTCCCGGATATTGTCGTGGTGGTAGGTGCTCCGGCTACTACTACGGTTTGGACGTC	ARDRTPGYCRGGRCSGYYYGLDV	246	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_12463  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  96.4% (241/250)  IGHV4-31*03  50   .....TCC...A..............................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S  
                    Query_12463  94   TGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGACTTACCATATCAGTAGACACGTCTG  183
V  96.4% (241/250)  IGHV4-31*03  140  .........................................................A.......G.......................A  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      E  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  R  T  P  G  Y  C  
                    Query_12463  184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCATATATTACTGTGCGAGAGATCGGACTCCCGGATATTGTC  273
V  96.4% (241/250)  IGHV4-31*03  230  ..................................................G.G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  92.0% (23/25)    IGHD2-15*01  2    --------------------------------------------------------------------------------.........A  11

                                      --CDR3-IMGT----------------------------->                                 
                                      R  G  G  R  C  S  G  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12463  274  GTGGTGGTAGGTGCTCCGGCTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  347
D  92.0% (23/25)    IGHD2-15*01  12   ..........C....-----------------------------------------------------------  26
J  98.2% (54/55)    IGHJ6*02     8    -------------------.............A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_51786

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            397     8e-113
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_12464  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.8% (272/290)  IGHV1-8*02   6    .............................................................................C.....C......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_12464  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTATGCACA  180
V  93.8% (272/290)  IGHV1-8*02   96   ........A.........................................................C.......................  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_12464  181  GAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.8% (272/290)  IGHV1-8*02   186  .......C............C.......A..A...C.T....A..................C..........G.GAT....G........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12464  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.8% (272/290)  IGHV1-8*02   276  ...G................---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01   9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_51785

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12465  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01   49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_12465  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01   139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_12465  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01   229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01   13   ----------------------------------------------------------------------.....C..G...--------  24

                                      ----------->                                  
                                       G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_12465  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_51784

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           347     7e-98
IGHD3-3*01                                                                                            10.3    123  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTCTTC	TTTTT	CTCCAAGAGAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTCTTCTTTTTCTCCAAGAGAGAGTCTACTACTTTGACTAC	ARSLLFLQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  K  S  G  G  Y  Y  W  S  W  V  R  Q  H  P  G  K  G 
                    Query_12466  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAAGAGTGGTGGCTACTACTGGAGCTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (235/248)  IGHV4-31*03  49   ..................................C.....GC........T...............A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  A  T  S 
                    Query_12466  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGCCACGTCT  180
V  94.8% (235/248)  IGHV4-31*03  139  ..................................G.............C......................C........A.A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  S  L  L  F  L  Q  E 
                    Query_12466  181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACTGTCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTCTTCTTTTTCTCCAAGAG  270
V  94.8% (235/248)  IGHV4-31*03  229  .....................C....C..........C..............................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD3-3*01   10   ----------------------------------------------------------------------------.....---------  14

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12466  271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_51789

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     1e-87
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGTGAGGAAGGA	TACTATGATACTAGTGGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGTGAGGAAGGATACTATGATACTAGTGGTTATTCGGACTAT	AKDGEEGYYDTSGYSDY	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	45	6	0	88.2
CDR2-IMGT	100	123	24	20	4	0	83.3
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	232	216	16	0	93.1


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  T  P  G  K  G  L  E  W  V  S  T  V  
                    Query_12467  14   GTGCAGCCTCTGGATTCACCTTTAGTAGATATGCCATGTCCTGGGTCCGCCAGACTCCAGGGAAGGGCCTGGAGTGGGTCTCAACAGTGA  103
V  93.1% (216/232)  IGHV3-23*01  65   .........................C..C.........AG.............G.............G...............G.TA.T.  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  G  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_12467  104  GTGGTAGTGGAGGTGGCACATACTATGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATTTGC  193
V  93.1% (216/232)  IGHV3-23*01  155  ..........T...A..........C............................................................C...  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------------CDR3-IMGT----------------
                                      Q  M  N  S  L  R  T  E  D  T  A  I  Y  Y  C  A  K  D  G  E  E  G  Y  Y  D  T  S  G  Y  S  
                    Query_12467  194  AAATGAACAGCCTGAGAACCGAGGACACGGCCATATATTACTGTGCGAAAGATGGTGAGGAAGGATACTATGATACTAGTGGTTATTCGG  283
V  93.1% (216/232)  IGHV3-23*01  245  .................G..............G...................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  95.5% (21/22)    IGHD3-22*01  5    -----------------------------------------------------------------..........G...........---  26
J  97.5% (39/40)    IGHJ4*02     9    -----------------------------------------------------------------------------------------.  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12467  284  ACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  97.5% (39/40)    IGHJ4*02     10   ....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_51788

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	70	4	0	94.6
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	46	5	0	90.2
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	294	273	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  E  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_12468  4    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAGAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCG  93
V  92.9% (273/294)  IGHV5-51*01  2    ....G........G.....................A.................................G............C......A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      A  Y  W  I  G  W  V  R  H  M  P  G  E  G  L  E  W  I  G  F  I  Y  P  G  D  S  S  T  R  Y  
                    Query_12468  94   CCTACTGGATCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAGTGGATTGGGTTCATCTATCCTGGTGACTCTAGTACCAGATACA  183
V  92.9% (273/294)  IGHV5-51*01  92   G.....................C..G.........A................G...A....................GA...........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  I  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  
                    Query_12468  184  GCCCGTCCTTCCAAGGCCAGATCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACA  273
V  92.9% (273/294)  IGHV5-51*01  182  ....................G............................C...........G...............A.....T......  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_12468  274  CCGCCGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  363
V  92.9% (273/294)  IGHV5-51*01  272  .....A.G................------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD6-19*01  5    --------------------------............----------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_12468  364  CCTCAG  369
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_187689

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           350     8e-99
IGHD3-10*01                                                                                           23.8    0.011
IGHJ1*01                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TAACGGCG	GGTTCGGGGAGT	N/A	CTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAACGGCGGGTTCGGGGAGTCTGAATACTTCCAGCAC	ARHNGGFGESEYFQH	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_12469  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAAT  93
V  95.9% (234/244)  IGHV4-59*08  50   .....TCC...A....C....................................................................G..G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_12469  94   GGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCCAAGAACC  183
V  95.9% (234/244)  IGHV4-59*08  140  ........T.............................................................A...................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  N  G  G  F  G  E  S  E  
                    Query_12469  184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATAACGGCGGGTTCGGGGAGTCTGAAT  273
V  95.9% (234/244)  IGHV4-59*08  230  ...........................................C....................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (12/12)   IGHD3-10*01  11   ------------------------------------------------------------------------............------  22
J  100.0% (51/51)   IGHJ1*01     2    ------------------------------------------------------------------------------------......  7

                                      ---------->                                  
                                      Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12469  274  ACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (51/51)   IGHJ1*01     8    .............................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_105578

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           380     1e-107
IGHD5-12*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TG	GTGGCTAC	AATCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTGGCTACAATCCTTACTTTGACTAC	ARDGGYNPYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	247	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12470  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGCTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (247/251)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  L  I  D  T  S 
                    Query_12470  91   CTGGAGTGGATTGGCTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATTAATAGACACGTCT  180
V  98.4% (247/251)  IGHV4-31*03  139  ..............G.............................................................C.G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  G  Y  N  P  Y 
                    Query_12470  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGGTGGCTACAATCCTTAC  270
V  98.4% (247/251)  IGHV4-31*03  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD5-12*01  10   -------------------------------------------------------------------------........---------  17
J  100.0% (46/46)   IGHJ4*02     3    ---------------------------------------------------------------------------------------...  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12470  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (46/46)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_171268

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           413     2e-117
IGHD1-26*01                                                                                           10.3    134   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	292	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	10	78	69	68	1	0	98.6
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	109	5	0	95.6
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_12471  10   CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  99
V  95.5% (277/290)  IGHV1-18*01  7    .................................................A...................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  Y  A  Q 
                    Query_12471  100  GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTATGCACAG  189
V  95.5% (277/290)  IGHV1-18*01  97   .G.................................................T......G.G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_12471  190  GGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  279
V  95.5% (277/290)  IGHV1-18*01  187  AA........................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_12471  280  ATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  358
V  95.5% (277/290)  IGHV1-18*01  277  G.G.................-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_286811

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           364     5e-103
IGHD2-2*01                                                                                            23.8    0.011 
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GAGGGAGTGCG	GTAGTATCAGCTGCT	TTCGGGGT	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGAGGGAGTGCGGTAGTATCAGCTGCTTTCGGGGTCAACTGGTTCGACCCC	AKGGSAVVSAAFGVNWFDP	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  P  G  F  T  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12472  1    GGTCCCTGAGACTCTCCTGTGCAGCCCCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-23*01  47   ..........................T..............................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  A  A  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12472  91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGCTGCCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCG  180
V  96.8% (241/249)  IGHV3-23*01  137  ..............................G.AG.......................................................A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      E  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  G  S  A  V  V  S  
                    Query_12472  181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCCGTATATTACTGTGCGAAAGGAGGGAGTGCGGTAGTATCAG  270
V  96.8% (241/249)  IGHV3-23*01  227  ..............C.........................G............................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (14/15)    IGHD2-2*01   12   --------------------------------------------------------------------------------......C...  21

                                      -IMGT----------------------->                                  
                                      A  A  F  G  V  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12472  271  CTGCTTTCGGGGTCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  93.3% (14/15)    IGHD2-2*01   22   .....----------------------------------------------------------  26
J  100.0% (50/50)   IGHJ5*02     2    -------------..................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_286812

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            325     3e-91
IGHD6-13*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACCTGGTACTCGGGGTTTTGACTAC	ARHLGTPGTRGFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	22	2	3	81.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	246	229	14	3	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_12473  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  87
V  93.1% (229/246)  IGHV4-4*02   49   ...............................G.....T........GTA.......................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  S  Y  H  S  G  R  T  N  Y  N  A  S  F  Q  S  R  V  T  I  S  V  D  T  S  K 
                    Query_12473  88   GAGTGGATTGGGGAATCCTATCATAGTGGGCGCACCAACTACAACGCGTCCTTCCAGAGTCGAGTCACCATATCAGTAGACACGTCCAAG  177
V  93.1% (229/246)  IGHV4-4*02   139  ...............AT.............A..............C.....C..A...........................A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  P  G  T  R 
                    Query_12473  178  AATCAATTCTCCCTGAATCTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACCTGGTACTCGG  267
V  93.1% (229/246)  IGHV4-4*02   229  ..C..G...........G....G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12473  268  GGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (43/43)   IGHJ4*02     6    ---...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_286813

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           315     5e-88
IGHD3-22*01                                                                                           31.5    6e-05
IGHJ4*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTCCCAGGGTGACCTAC	TACTATGATAATACTGGTTATT	TTTCCCCATACCC	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTCCCAGGGTGACCTACTACTATGATAATACTGGTTATTTTTCCCCATACCCCTTCGACTAC	ARSPRVTYYYDNTGYFSPYPFDY	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  V  R  Q  S  P  G  K  G  L  Q 
                    Query_12474  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTATTACTGGAGCTGGGTCCGGCAGTCCCCAGGGAAGGGACTGCAG  90
V  91.4% (222/243)  IGHV4-59*01  49   ........................................G......C............A........C.................G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  V  Y  Y  L  G  T  T  N  Y  N  P  S  L  Q  N  R  V  T  I  S  V  D  T  S  E  N 
                    Query_12474  91   TGGGTTGGCTATGTCTATTACCTTGGGACCACCAACTACAACCCCTCCCTACAGAATCGAGTCACCATTTCAGTTGACACGTCCGAGAAC  180
V  91.4% (222/243)  IGHV4-59*01  139  ...A....G...A........AG.....G.....................CA...G............A.....A.........A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  F  S  L  N  L  A  A  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  R  V  T  Y  Y  Y  D 
                    Query_12474  181  CAGTTCTCCCTGAACCTGGCCGCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAAGTCCCAGGGTGACCTACTACTATGAT  270
V  91.4% (222/243)  IGHV4-59*01  229  ..............G...AG.T.........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.9% (20/22)    IGHD3-22*01  5    ---------------------------------------------------------------------------------.........  13

                                      3-IMGT----------------------------->                                  
                                       N  T  G  Y  F  S  P  Y  P  F  D  Y  W  G  H  G  I  L  L  T  V  S  S  
                    Query_12474  271  AATACTGGTTATTTTTCCCCATACCCCTTCGACTACTGGGGCCACGGAATCCTGCTCACCGTCTCCTCAG  340
D  90.9% (20/22)    IGHD3-22*01  14   .G..G........---------------------------------------------------------  26
J  90.9% (40/44)    IGHJ4*01     5    --------------------------...T..............A....C....G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_286814

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           330     1e-92
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACGCCTG	ATGGTTCGGGGAGCTATT	TGGAGGGGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGCCTGATGGTTCGGGGAGCTATTTGGAGGGGTTACTTTGACTAC	ARLMVRGAIWRGYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	245	2	2	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  F  S  S  S  N  F  Y  W  G  W  I  R  Q  A  P  G  K  G 
                    Query_12475  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCTTCAGCAGTAGTAACTTCTACTGGGGCTGGATCCGCCAGGCCCCAGGGAAGGGA  90
V  93.1% (228/245)  IGHV4-39*01  49   ...................C................A............GT.A......................C.............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  W  Y  S  G  R  T  N  Y  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12475  91   CTAGAGTGGATTGGGAATATCTGGTATAGTGGGAGGACTAACTACAACACGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  93.1% (228/245)  IGHV4-39*01  139  ..G.............G.....AT...........C..CT........C.........................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  V  R  G  A  I 
                    Query_12475  181  AAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCTGTATATTACTGTGCACGCCTGATGGTTCGGGGAGCTATT  270
V  93.1% (228/245)  IGHV4-39*01  229  .....................C...............................G...........-------------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  94.4% (17/18)    IGHD3-10*01  9    ------------------------------------------------------------------------.............T....  26

                                      GT------------------>                                  
                                       W  R  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12475  271  TGGAGGGGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (46/46)   IGHJ4*02     3    ---------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_286816

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGCCGG	AGTAGTGGTTATTACT	CTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGCCGGAGTAGTGGTTATTACTCTTACTACTTTGACTAC	ARGRRSSGYYSYYFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	243	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12476  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.6% (243/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12476  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  99.6% (243/244)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  S  S  G  Y  Y  S 
                    Query_12476  181  CAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGTCGCCGGAGTAGTGGTTATTACTCT  270
V  99.6% (243/244)  IGHV4-59*01  229  ...................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (16/16)   IGHD3-22*01  14   ------------------------------------------------------------------------................--  29

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12476  271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_286817

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           346     2e-97
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCCAA	GTATAGAAGTGGC	ACCTACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCCAAGTATAGAAGTGGCACCTACTTTTGACTAT	AREPSIEVAPTFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  T  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  R  R 
                    Query_12477  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTACTGGTGGCTACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAGGAGA  90
V  94.0% (236/251)  IGHV4-61*08  49   .........................................C.G......T...........C.................A....A.G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 
                    Query_12477  91   CTGGAGTGGATTGGCTATATCTATTACACTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACAAGTCG  180
V  94.0% (236/251)  IGHV4-61*08  139  ..............G.............G......C............................................A....C...C  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  P  S  I  E  V  A 
                    Query_12477  181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGAGCCAAGTATAGAAGTGGCA  270
V  94.0% (236/251)  IGHV4-61*08  229  ...................A.......................................C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD6-19*01  3    ----------------------------------------------------------------------------......C......-  15

                                      -------------->                                  
                                       P  T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12477  271  CCTACTTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  97.7% (42/43)    IGHJ4*02     6    ------........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_171260

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	274	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_12478  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  95.1% (274/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_12478  91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  95.1% (274/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_12478  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  95.1% (274/288)  IGHV5-51*01  186  ...............G.........................T.........................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12478  271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  95.1% (274/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_286819

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           272     2e-75
IGHD3-10*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GGGACATGTTAG	GGTTCGGGGA	CTTGGTTCCCCTTGCCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACATGTTAGGGTTCGGGGACTTGGTTCCCCTTGCCCAC	ARDMLGFGDLVPLAH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	210	36	0	85.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  S  S  Y  A  I  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12479  1    GGTCCCTGAGACTCTCCTGTGCGGTCTCTGGATTCACCTTTTCCAGTTATGCCATCTCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  85.4% (210/246)  IGHV3-23*01  47   ......................A.C................AG...C........GAG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  G  D  S  A  A  K  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_12479  91   AGTGGGTCTCTGGCATCGGTGACAGTGCTGCCAAGACATATTACGCAGACTCCGTGAGGGGCCGCTTCACCATCTCCAGAGACAATTCCA  180
V  85.4% (210/246)  IGHV3-23*01  137  ..........A.CT..TA...GT....G..GT.GC.....C................A......G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  M  T  V  Y  L  Q  M  N  S  L  R  P  E  D  T  G  M  Y  F  C  A  R  D  M  L  G  F  G  D  
                    Query_12479  181  GAATGACAGTATATCTGCAAATGAACAGTCTGAGACCCGAGGACACGGGCATGTATTTCTGTGCGAGGGACATGTTAGGGTTCGGGGACT  270
V  85.4% (210/246)  IGHV3-23*01  227  AG.AC..GC.G.................C......G............C.G.A....A........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD3-10*01  11   ------------------------------------------------------------------------------..........--  20

                                      ---------------->                                  
                                      L  V  P  L  A  H  W  G  Q  G  V  L  V  S  V  S  S  
                    Query_12479  271  TGGTTCCCCTTGCCCACTGGGGCCAGGGAGTCCTGGTCAGCGTCTCCTCAG  321
J  91.7% (33/36)    IGHJ4*02     13   ---------------..............AC........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_171264

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           347     7e-98
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATAG	GGGTG	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATAGGGGTGACTATTTTGACTAC	ARGLHYYDRGDYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12480  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTCACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.4% (236/250)  IGHV4-31*03  49   ..................................C......C.........T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12480  91   CTGGAGTGGATTGGGTTCATTTATTACAGTGGGACCACCTACTACAATAAGTCCCTCAAGAGTCGAGTCACCATATCGGTAGACACGTCT  180
V  94.4% (236/250)  IGHV4-31*03  139  ................A...C.............G............CCC..................T........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R 
                    Query_12480  181  AAGAACCAGTTCTCCCTGAATCTGCGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCTCCATTACTATGATAGG  270
V  94.4% (236/250)  IGHV4-31*03  229  ....................G...A.............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD3-22*01  3    ----------------------------------------------------------------------------.............-  15

                                      ----------------->                                  
                                       G  D  Y  F  D  Y  W  G  Q  G  I  L  V  P  V  S  S  
                    Query_12480  271  GGTGACTATTTTGACTACTGGGGCCAGGGAATCCTGGTCCCCGTCTCCTCAG  322
J  93.8% (45/48)    IGHJ4*02     1    ----....C......................C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_171265

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           297     8e-83
IGHD2-21*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGGGGG	ATTGTGATGGT	ATTAACTGCTTCCCCTGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGGATTGTGATGGTATTAACTGCTTCCCCTGGTACTACTATTATGGAATGCACGTC	AKGDCDGINCFPWYYYYGMHV	240	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	243	4	4	0	0	100
Total	N/A	N/A	240	215	25	0	89.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  L  Y  G  G  S  F  S  G  H  Y  W  I  W  L  R  Q  S  P  G  K  G  L  E  
                    Query_12481  4    CCCTGAGACTCTCCTGCGCTCTCTATGGTGGGTCCTTCAGTGGTCACTACTGGATTTGGCTCCGCCAGTCCCCCGGGAAGGGGCTGGAGT  93
V  89.6% (215/240)  IGHV4-34*01  50   .....TCC...A........G.......................T.........GC...A........C....A................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  S  T  K  Y  N  S  S  L  K  S  R  V  A  M  S  I  D  A  S  K  G  
                    Query_12481  94   GGATTGGGGAAATCAATCATAGTGGAAGCACGAAGTACAACTCGTCCCTCAAGAGTCGAGTCGCCATGTCAATAGACGCGTCCAAGGGTC  183
V  89.6% (215/240)  IGHV4-34*01  140  ...............................C..C......C....................A....A...G.....A........AAC.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------------CDR3-IM
                                      Q  F  Y  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  G  D  C  D  G  I  N  C  F  
                    Query_12481  184  AATTCTACCTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAAGGGGGATTGTGATGGTATTAACTGCTTCC  273
V  89.6% (215/240)  IGHV4-34*01  230  .G....C...........G...........................G.............------------------------------  289
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  90.9% (10/11)    IGHD2-21*01  6    ------------------------------------------------------------------......G....-------------  16

                                      GT-------------------------->                                 
                                      P  W  Y  Y  Y  Y  G  M  H  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_12481  274  CCTGGTACTACTATTATGGAATGCACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  335
J  91.2% (52/57)    IGHJ6*02     6    -----........C..C..T...G...........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_171267

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           332     3e-93
IGHD2-15*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	ACCCGTTTTGTCT	TGGCGGTAGATGC	ATCTCGGGCTTGAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACCCGTTTTGTCTTGGCGGTAGATGCATCTCGGGCTTGAGTGACTTC	ARDPFCLGGRCISGLSDF	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  P  G  G  P  F  S  G  H  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_12482  1    ACCCTGTCCCTCACCTGCGCTGTCCCTGGTGGGCCCTTCAGTGGTCACTACTGGAACTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  93.4% (228/244)  IGHV4-34*01  49   ........................TA.......T...........T.........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  R  G  G  S  T  T  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_12482  91   TGGATTGGGGAAATCAATCGTGGTGGAAGCACCACCTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-34*01  139  ...................A.A............A.................................A..A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  F  C  L  G  G  R  C 
                    Query_12482  181  CAATTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGCGAGACCCGTTTTGTCTTGGCGGTAGATGC  270
V  93.4% (228/244)  IGHV4-34*01  229  ..G...........G....G...........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (11/13)    IGHD2-15*01  13   -----------------------------------------------------------------------------...T.....C...  25

                                      -------------------->                                  
                                       I  S  G  L  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12482  271  ATCTCGGGCTTGAGTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.6% (40/41)    IGHJ4*02     8    --------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_14999

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         367     6e-104
IGHD4-17*01                                                                                           21.8    0.040 
IGHJ5*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGACTACGGTG	GTGACTC	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATGACTACGGTGGTGACTCCAATTGGTTCGACCCC	VRDDYGGDSNWFDP	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	243	8	0	96.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  R  G 
                    Query_12483    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  96.8% (243/251)  IGHV4-30-2*01  49   .....................................................................................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  S  Y  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_12483    91   CTGGAGTGGATTGGGTACATCTATCATAGTGGGAGCTCCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCAATAGACACGTCC  180
V  96.8% (243/251)  IGHV4-30-2*01  139  ....................................A.....................................A...G......G....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  D  D  Y  G  G  D  S 
                    Query_12483    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGTCAGAGATGACTACGGTGGTGACTCC  270
V  96.8% (243/251)  IGHV4-30-2*01  229  .....................................................G.....C....C......-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD4-17*01    1    -----------------------------------------------------------------------...........--------  11
J  97.9% (47/48)    IGHJ5*02       2    -----------------------------------------------------------------------------------------.  2

                                        -------------->                                
                                         N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12483    271  AATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  317
J  97.9% (47/48)    IGHJ5*02       3    ..C............................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_351688

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACGGTAAAGGG	GGTTATTACT	GT	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACGGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTACGGACGTC	ARTVKGVITVYQYFATDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  R  P  G  K  G  L  E 
                    Query_12484  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCGCCCAGGGAAGGGACTGGAG  90
V  91.4% (222/243)  IGHV4-34*01  49   ................................G...T..................G..............C............G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  I  S  L  D  M  S  K  N 
                    Query_12484  91   TGGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGAGTCTCCATATCATTAGACATGTCCAAGAAT  180
V  91.4% (222/243)  IGHV4-34*01  139  .............................C..................C..A...........A........G......C.........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  I  S  V  R  V  T  S  V  T  A  A  D  T  A  T  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y 
                    Query_12484  181  CAGATCTCCGTGAGGGTGACGTCTGTGACCGCCGCGGACACGGCTACTTATTACTGTGCGAGAACGGTAAAGGGGGTTATTACTGTCTAC  270
V  91.4% (222/243)  IGHV4-34*01  229  ...T.....C...A.C...GC........................GTG...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  20   --------------------------------------------------------------------------..........------  29
J  91.4% (53/58)    IGHJ6*02     5    --------------------------------------------------------------------------------------....  8

                                      -------------------->                                 
                                       Q  Y  F  A  T  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12484  271  CAGTACTTCGCTACGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  91.4% (53/58)    IGHJ6*02     9    T.C....A..G..T........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_30549

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            403     1e-114
IGHD3-10*01                                                                                           14.1    8.8   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TCGGGGA	CTCCTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATCGGGGACTCCTGTTTGACTTC	ARDRGLLFDF	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	26	1	0	96.3
FR3-IMGT	159	272	114	107	7	0	93.9
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	280	269	11	0	96.1


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  G  I  S  G  D  S  V  S  S  D  T  A  A  W  N  W  
                    Query_12485  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGGCATCTCCGGGGACAGTGTCTCTAGCGACACTGCTGCTTGGAACTGGA  90
V  96.1% (269/280)  IGHV6-1*01   26   ..........................................C.........................A...G.................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  K  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_12485  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAAGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAGG  180
V  96.1% (269/280)  IGHV6-1*01   116  ...................................................G....................................AA  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      G  R  I  T  I  N  S  D  T  S  K  N  Q  F  S  L  H  L  N  S  M  T  P  E  D  T  A  V  Y  Y  
                    Query_12485  181  GTCGAATAACCATCAACTCAGACACATCCAAGAACCAGTTCTCCCTGCACCTGAACTCTATGACTCCCGAGGACACGGCTGTATACTACT  270
V  96.1% (269/280)  IGHV6-1*01   206  .................C...............................G.........G......................G..T....  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------CDR3-IMGT--------->                                  
                                      C  A  R  D  R  G  L  L  F  D  F  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_12485  271  GTGCAAGAGATCGGGGACTCCTGTTTGACTTCTGGGGCCAGGGAATCCTGGTCACCGTCTCGTCAG  336
V  96.1% (269/280)  IGHV6-1*01   296  ..........--------------------------------------------------------  305
                                      C  A  R                                                           
D  100.0% (7/7)     IGHD3-10*01  14   ----------.......-------------------------------------------------  20
J  93.0% (40/43)    IGHJ4*02     6    -----------------------.......A..............C...............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_14991

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            325     3e-91
IGHD3-22*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCTA	TATTACTATGAAAGTAGTGGTT	CAT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCTATATTACTATGAAAGTAGTGGTTCATACTTCTTTGACTAC	ARSLYYYESSGSYFFDY	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  D  S  I  S  N  S  R  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12486  1    ACCCTGTCCCTCACTTGCGCTGTCTCTGGTGACTCCATCAGTAATTCTAGGTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  92.3% (227/246)  IGHV4-4*02   49   ..............C................G.........C.G.AG..AC...................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  D  I  H  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  K  S  K 
                    Query_12486  91   GAGTGGATTGGAGACATCCATCATAGTGGGACCACCAACTACAATCCGTCCCTCAAGAGTCGAGTCACCCTCTCAGTAGACAAGTCCAAG  180
V  92.3% (227/246)  IGHV4-4*02   139  ...........G..A...T............G............C........................A.A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       K  R  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  Y  E  S  S 
                    Query_12486  181  AAGCGGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAAGCCTATATTACTATGAAAGTAGT  270
V  92.3% (227/246)  IGHV4-4*02   229  ..C.A.................G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  95.5% (21/22)    IGHD3-22*01  2    ------------------------------------------------------------------------...........T......  19

                                      -------------------->                                  
                                       G  S  Y  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12486  271  GGTTCATACTTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  95.5% (21/22)    IGHD3-22*01  20   ....---------------------------------------------------  23
J  97.9% (47/48)    IGHJ4*02     1    -------...A............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_14990

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTATTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  N  H  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12487  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTAATCACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (222/245)  IGHV4-59*01  49   .......................................AG..G.T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  S  H  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  T  A  D  K  S  K  N 
                    Query_12487  91   TGGATTGCCTATATCTCTCACAGTGGGGGCACCAATTACAACCGCTCCCTCAAGAGTCGAGTCACCATAACAGCGGACAAGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  .......GG.......A.T........A.......C.......C.........................T...TA....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_12487  181  CAGTTTTCCCTGAAGGTGAGATCTGTGACCGCCGCGGACACGGCCGTATATTATTGTGCCAGAGAGGCCTACTCTTATTACGGTATGGAC  270
V  90.6% (222/245)  IGHV4-59*01  229  .....C.........C....C...........T..............G.....C.....G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  91.4% (53/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC..C............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_12487  271  GTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  306
J  91.4% (53/58)    IGHJ6*02     27   ...........A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_14993

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	ARDSSWNGVDYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12488  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ........................................G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_12488  91   TGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ........G...A..T...............................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  N  G  V  D  Y 
                    Query_12488  181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTAC  270
V  96.7% (237/245)  IGHV4-59*01  229  ...............C....C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12488  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_14992

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           308     4e-86
IGHD2-15*01                                                                                           29.5    2e-04
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCGGGACG	TGTAGTGGTGGAAACTGCTAC	GTCCATACTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCGGGACGTGTAGTGGTGGAAACTGCTACGTCCATACTCTTGATATC	ARDPGTCSGGNCYVHTLDI	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	222	25	0	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  S  V  T  S  N  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_12489  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGGTTCAGCGTCACCAGCAACTCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.9% (222/247)  IGHV3-53*01  47   ....................G...............C.....GT.......A.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  A  V  I  Y  G  G  G  T  T  R  Y  T  D  S  V  K  G  R  F  T  V  S  R  D  N  F  N  
                    Query_12489  91   AGTGGGTAGCTGTTATTTATGGCGGCGGCACAACACGCTACACAGACTCCGTGAAGGGCCGATTCACCGTTTCCAGAGACAATTTCAACA  180
V  89.9% (222/247)  IGHV3-53*01  137  .......CT.A.........A....T..T.GC...TA....G..........................A.C.............C...G.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------CDR3-IM
                                      N  T  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  P  G  T  C  S  G  G  
                    Query_12489  181  ACACGCTGCATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTCTATTATTGTGCGAGAGATCCCGGGACGTGTAGTGGTGGAA  270
V  89.9% (222/247)  IGHV3-53*01  227  ........T......................................G.G.....C...........-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  90.5% (19/21)    IGHD2-15*01  8    -----------------------------------------------------------------------------...........T.  20

                                      GT----------------------->                                  
                                      N  C  Y  V  H  T  L  D  I  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_12489  271  ACTGCTACGTCCATACTCTTGATATCTGGGGCCAAGGGACAAGGGTCACCGTCTCTTCAG  330
D  90.5% (19/21)    IGHD2-15*01  21   G.......----------------------------------------------------  28
J  97.6% (41/42)    IGHJ3*02     9    ------------------........................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_14995

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           352     3e-99
IGHD3-3*01                                                                                            10.3    115  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGCGGAAA	GATTT	C	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGCGGAAAGATTTCCTACTTTGACTAC	ARRGKISYFDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	234	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  H  G  S  I  S  G  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  G 
                    Query_12490  1    ACCCTGTCCCTCACCTGCACTGTCTCTCATGGCTCCATCAGTGGTTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGGG  90
V  96.3% (234/243)  IGHV4-59*01  49   ...........................GG.............A...A......................C..................A.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  G  T  M  S  V  D  T  S  K  N 
                    Query_12490  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGGCACCATGTCAGTAGACACGTCCAAGAAC  180
V  96.3% (234/243)  IGHV4-59*01  139  .............................................................T......A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  K  I  S  Y  F  D  Y 
                    Query_12490  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGACGCGGAAAGATTTCCTACTTTGACTAC  270
V  96.3% (234/243)  IGHV4-59*01  229  ...................G...........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-3*01   8    -----------------------------------------------------------------------.....--------------  12
J  97.9% (46/47)    IGHJ4*02     2    -----------------------------------------------------------------------------.............  14

                                                                        
                                       W  G  L  G  T  L  V  T  V  S  S  
                    Query_12490  271  TGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  304
J  97.9% (46/47)    IGHJ4*02     15   .......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_14994

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     5e-89
IGHD3-3*01                                                                                            12.2    31   
IGHJ3*01                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCT	TTACGA	GGGGCTAACTTTTCCTT	TCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCTTTACGAGGGGCTAACTTTTCCTTTC	ARDLYEGLTFPF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12491  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTTCTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ..........................................AG.....A........................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  N  S 
                    Query_12491  91   TGGCTAGGATATATCTATTACACTGGGAGTACCAACTACAATCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCAACAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ...A.T..G.............G......C...........C..................G.........................G.A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  E  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  Y  E  G  L  T  F  P 
                    Query_12491  181  CAATTCTCCCTGGAGTTGTCTTCTGTGACCGCTGCGGACACGGCCGTGTACTATTGTGCGAGAGACCTTTACGAGGGGCTAACTTTTCCT  270
V  91.4% (224/245)  IGHV4-59*01  229  ..G.........A..C..AGC.............................T..C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-3*01   4    --------------------------------------------------------------------......----------------  9

                                      -->                                  
                                       F  W  G  P  G  T  M  V  T  V  S  S  
                    Query_12491  271  TTCTGGGGCCCAGGGACAATGGTCACCGTCTCCTCAG  307
J  94.4% (34/36)    IGHJ3*01     15   -.........A.....................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_14997

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           285     4e-79
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACTTTGACTTC	ARVSTSAYYFDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	213	31	0	87.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  P  R  Q  P  P  G  K  G  L  E 
                    Query_12492  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCCCCGACAACCCCCAGGAAAGGGACTGGAG  90
V  87.3% (213/244)  IGHV4-59*01  49   .................................T........A.....T.C.........AT...G..G........G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  S  F  D  T  S  K  R 
                    Query_12492  91   TGGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGTCCTTTGACACGTCCAAGAGG  180
V  87.3% (213/244)  IGHV4-59*01  139  .......GGT....C...........G.G..C...C................A..G............A..AG.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  Y  Y  F  D 
                    Query_12492  181  CAGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATACTACTTTGAC  270
V  87.3% (213/244)  IGHV4-59*01  229  .............A....AGC..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD2-2*01   17   ---------------------------------------------------------------------......---------------  22
J  91.3% (42/46)    IGHJ4*02     1    -------------------------------------------------------------------------------...........  11

                                      -->                                
                                       F  W  G  R  G  T  L  V  V  V  S  S
                    Query_12492  271  TTCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  305
J  91.3% (42/46)    IGHJ4*02     12   .A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_14996

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_12493  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.8% (277/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_12493  91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_12493  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12493  271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.8% (277/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_12493  361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_271808

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           12.2    33   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCGG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGGAACTGGTTCGACCCC	ARGGWRRQRNWFDP	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	47	4	0	92.2
CDR2-IMGT	126	146	21	18	3	0	85.7
FR3-IMGT	147	260	114	101	13	0	88.6
CDR3-IMGT (germline)	261	268	8	7	1	0	87.5
Total	N/A	N/A	268	239	29	0	89.2


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  F  D  E  S  L  S  G  Y  Y  W  S  W  L  R  
                    Query_12494  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACTTGCGCTGTGTTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCC  90
V  89.2% (239/268)  IGHV4-34*01  26   ........T.......T....................C........C.A..G..G......C.................C...A.C....  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  S  H  S  G  S  T  R  Y  N  P  A  L  R  S  R  V  T  
                    Query_12494  91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGGAAATCAGTCATAGTGGAAGTACGAGGTACAACCCGGCCCTCAGGAGTCGAGTCACCA  180
V  89.2% (239/268)  IGHV4-34*01  116  ................G......................A............C..C.AC.........T......A..............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      M  S  V  D  T  S  K  K  Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  I  Y  Y  C  A  R  G  
                    Query_12494  181  TGTCAGTAGACACGTCCAAGAAGCAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTATATATTACTGTGCGCGAGGGG  270
V  89.2% (239/268)  IGHV4-34*01  206  .A....................C..GT...........C..A......T...................G.G............A....--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------------------.  13

                                      -------CDR3-IMGT--------------->                                  
                                      G  W  R  R  Q  R  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12494  271  GCTGGCGAAGACAGCGGAACTGGTTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  336
D  100.0% (6/6)     IGHD6-19*01  14   .....-------------------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    -----------------.............................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_117133

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD3-16*02                                                                                           18.0    0.68  
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATGATAGTGGC	AGTTATCTTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGCAGTTATCTTTATTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_12495  1    GCAGCTGGTGCAGTCTGGGGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTACCAACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ..................A..............................................G...........G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  D  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_12495  91   CTGGATCGACTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G...................................................................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  I  T  I  S  A  D  N  S  I  G  T  A  Y  L  Q  L  H  S  L  K  A  S  D  T  A
                    Query_12495  181  GTCCTTCGAAGGCCAAATCACCATCTCAGCCGACAACTCCATCGGCACCGCCTACCTGCAGTTGCACAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  .......C.......GG...................G......A..................G.AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_12495  271  CATGTATTACTGTGCGAGACATGGGGATGATAGTGGCAGTTATCTTTATTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD3-16*02  23   -------------------------------------.......G....-----------------------------------------  34
J  98.1% (53/54)    IGHJ6*02     9    -------------------------------------------------....A....................................  49

                                                   
                                        T  V  S  S 
                    Query_12495  361  CACCGTCTCCTCA  373
J  98.1% (53/54)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_271804

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           385     5e-109
IGHD3-3*01                                                                                            23.8    0.013 
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGTC	CGATTTCTGGAGTGG	CCTACGTGGG	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGTCCGATTTCTGGAGTGGCCTACGTGGGCTACCACTCCGGTATGGACGTC	ARAGPISGVAYVGYHSGMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  T  S  G  G  K  F  R  I  Y
                    Query_12496  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACTTCTGGAGGCAAGTTCAGGATATA  90
V  92.4% (268/290)  IGHV1-69*01  6    ..................G.............................................G............CC.....C.GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        S  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  A  G  K  A  N  Y  A  P
                    Query_12496  91   TTCTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCGCTGGCAAAGCAAACTACGCACC  180
V  92.4% (268/290)  IGHV1-69*01  96   .G.......C.........................................................TT...T.C..............A  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  V  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  V  Y  M  E  L  N  S  L  R  S  G  D  T  A
                    Query_12496  181  GAAGGTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGTACTGTTTACATGGAACTGAACAGCCTGAGATCTGGGGACACGGC  270
V  92.4% (268/290)  IGHV1-69*01  186  ....T........................................C..A.CC........G....G..............A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        V  Y  Y  C  A  R  A  G  P  I  S  G  V  A  Y  V  G  Y  H  S  G  M  D  V  W  G  Q  G  T  T
                    Query_12496  271  CGTGTATTACTGTGCGAGAGCGGGTCCGATTTCTGGAGTGGCCTACGTGGGCTACCACTCCGGTATGGACGTCTGGGGCCAAGGGACCAC  360
V  92.4% (268/290)  IGHV1-69*01  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  93.3% (14/15)    IGHD3-3*01   7    --------------------------......T........-------------------------------------------------  21
J  94.5% (52/55)    IGHJ6*02     8    ---------------------------------------------------....T...A..............................  46

                                                      
                                        V  I  V  S  S 
                    Query_12496  361  GGTCATCGTCTCCTCA  376
J  94.5% (52/55)    IGHJ6*02     47   .....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_271807

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           322     2e-90
IGHD6-19*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	A	TATAGCAGTGGCTGGTAC	GGGACCG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGAATATAGCAGTGGCTGGTACGGGACCGTTGACTAC	AREYSSGWYGTVDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  F  F  M  S  W  I  R  Q  S  P  G  K  G  L  
                    Query_12497  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTTCTTCATGAGTTGGATCCGCCAGAGTCCGGGGAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-11*01  47   ................................................A..A......C............GC...A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  A  Y  I  G  G  S  G  T  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  D  
                    Query_12497  91   AGTGGATTGCATATATTGGCGGTAGTGGAACCACCATCTACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGACA  180
V  91.2% (228/250)  IGHV3-11*01  137  .....G..T....C...A.TA.......T.GT.....A.................................................C..  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  G  L  Y  Y  C  A  R  E  Y  S  S  G  W  Y  
                    Query_12497  181  AGAAATCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAAGACACGGGCCTGTATTACTGTGCGCGAGAATATAGCAGTGGCTGGTACG  270
V  91.2% (228/250)  IGHV3-11*01  227  ....C...................................G.......C.G..............A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD6-19*01  4    -----------------------------------------------------------------------..................-  21

                                      ------------->                                  
                                      G  T  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12497  271  GGACCGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (42/42)   IGHJ4*02     7    ------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_271806

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           413     2e-117
IGHD5-18*01                                                                                           14.1    9.5   
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGAG	TACATCTATG	CCTCGGGCGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGAGTACATCTATGCCTCGGGCGGACTGGGTCGACCAC	ARDRSTSMPRADWVDH	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  I  S  Y 
                    Query_12498  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTTATCAGTTAT  91
V  95.5% (277/290)  IGHV1-18*01  7    ............................A....................................T................C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  T  Y  N  A  N  T  N  S  A  Q 
                    Query_12498  92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCTACAATGCCAACACAAACTCTGCACAG  181
V  95.5% (277/290)  IGHV1-18*01  97   ..........................................................G.G.T.......GT..........A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  I  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_12498  182  AACCTCCAGGGCAGAATCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAACTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.5% (277/290)  IGHV1-18*01  187  ..G............G...........................................G..............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  D  R  S  T  S  M  P  R  A  D  W  V  D  H  W  G  Q  G  T  L  V  T  V  S 
                    Query_12498  272  GTGTATTACTGTGCGAGAGATCGGAGTACATCTATGCCTCGGGCGGACTGGGTCGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  361
V  95.5% (277/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD5-18*01  6    --------------------------....G.....------------------------------------------------------  15
J  95.8% (46/48)    IGHJ5*02     4    ----------------------------------------------.....T......C...............................  47

                                          
                                       S  
                    Query_12498  362  TCAG  365
J  95.8% (46/48)    IGHJ5*02     48   ....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_271801

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         286     1e-79
IGHD2-21*02                                                                                           37.2    1e-06
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGTTCCACATA	ATTGTGCTGGTGACTGCTATTC	AG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTTCCACATAATTGTGCTGGTGACTGCTATTCAGACTACTTTGACTCC	ARGVPHNCAGDCYSDYFDS	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	56	27	22	5	0	81.5
FR2-IMGT	57	107	51	47	4	0	92.2
CDR2-IMGT	108	128	21	17	4	0	81
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	245	214	31	0	87.3


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  R  L  S  C  A  V  S  G  S  S  I  T  S  S  Y  Y  W  G  W  I  R  Q  S  P  G  K  G  L  
                    Query_12499    4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTTCTTCCATCACCAGTTCTTACTACTGGGGCTGGATCCGGCAGTCCCCAGGGAAGGGGCTGG  93
V  87.3% (214/245)  IGHV4-38-2*01  50   .....TCC...A....C.............AC.......G....GG.........................C..................  139
                                           L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  G  D  A  S  H  G  G  S  T  H  F  N  P  S  L  R  G  R  V  T  I  S  L  H  T  S  R  
                    Query_12499    94   AGTGGATTGGCGATGCCTCTCATGGTGGGAGCACCCACTTCAACCCGTCCCTAAGGGGTCGAGTCACCATATCACTGCACACGTCCAGGA  183
V  87.3% (214/245)  IGHV4-38-2*01  140  ..........GAG.AT..A....A...........T...A............C.A.A.................G.AG.........A..  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><-----------------------CDR3-IM
                                        N  Q  F  S  L  N  V  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  V  P  H  N  C  A  G  
                    Query_12499    184  ACCAGTTCTCCCTGAACGTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGAGAGGGGTTCCACATAATTGTGCTGGTG  273
V  87.3% (214/245)  IGHV4-38-2*01  230  ................GC...G................................A..........-------------------------  294
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                          
D  95.5% (21/22)    IGHD2-21*02    6    ------------------------------------------------------------------------------......G.....  17

                                        GT----------------------->                                  
                                        D  C  Y  S  D  Y  F  D  S  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_12499    274  ACTGCTATTCAGACTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  333
D  95.5% (21/22)    IGHD2-21*02    18   ..........--------------------------------------------------  27
J  95.8% (46/48)    IGHJ4*02       1    ------------............A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_271803

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           321     6e-90
IGHD3-3*01                                                                                            12.2    31   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAGTGG	CAAGTAGGG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGAGTGGCAAGTAGGGGGTTCGACCCC	VRGVASRGFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  F  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12500  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCAGCTACTTTATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGACTCG  90
V  91.2% (227/249)  IGHV3-74*01  47   ...........................................T.......GG................................G..G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  A  R  I  R  S  D  G  T  T  T  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  V  
                    Query_12500  91   TGTGGGTCGCACGTATTCGGAGTGATGGGACTACCACAGCCTACGCGGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAACGTCA  180
V  91.2% (227/249)  IGHV3-74*01  137  ........T........AAT..........G..G....AG........................A......................C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  S  T  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  V  R  G  V  A  S  R  G  F  
                    Query_12500  181  AGAGCACACTGTATCTGGAAATGAACAGTCTGAGAGTCGAGGACACGGCTGTGTATTATTGTGTGAGAGGAGTGGCAAGTAGGGGGTTCG  270
V  91.2% (227/249)  IGHV3-74*01  227  ...A...G.........C..................C.....................C....CA....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-3*01   16   ---------------------------------------------------------------------......---------------  21
J  97.8% (44/45)    IGHJ5*02     7    ------------------------------------------------------------------------------------......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_12500  271  ACCCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  309
J  97.8% (44/45)    IGHJ5*02     13   ..........................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_271802

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           330     1e-92
IGHD1-7*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGACGTGG	ACTGGAACT	CAGGGTCCCTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGACGTGGACTGGAACTCAGGGTCCCTATGACTAC	AKGTWTGTQGPYDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  S  G  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_12501  1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCACGTTCAGTGGCTACGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-23*01  47   .......................G.............C..T..CA....T.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  T  G  G  G  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12501  91   AGTGGGTCTCAGCTATCAGTGGCACTGGTGGTGGCACATACTTCGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  92.4% (230/249)  IGHV3-23*01  137  ................T.....T.G.......A.........A..........................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  M  V  Y  L  E  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  G  T  W  T  G  T  Q  
                    Query_12501  181  AGAACATGGTGTATCTCGAAATGAACAGCCTGCGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGGGACGTGGACTGGAACTCAGG  270
V  92.4% (230/249)  IGHV3-23*01  227  ......C.C.......GC..............A.................G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD1-7*01   7    -----------------------------------------------------------------------------.........----  15

                                      ------------->                                  
                                      G  P  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12501  271  GTCCCTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (41/41)   IGHJ4*02     8    -------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_189689

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCCACGGTATGGACGTC	ARHGDDSGSYLYYFHGMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	281	14	0	95.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  
                    Query_12502  2    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCA  91
V  95.3% (281/295)  IGHV5-51*01  2    ....G............................A...................................G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  
                    Query_12502  92   ACTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACA  181
V  95.3% (281/295)  IGHV5-51*01  92   G...........G...........................C....................C...................C........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  G  L  K  A  S  D  
                    Query_12502  182  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCGGCCTGAAGGCCTCGGACA  271
V  95.3% (281/295)  IGHV5-51*01  182  ...........C.....................................C...........G......A..A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  H  G  M  D  V  W  G  Q  G  T  
                    Query_12502  272  CCGCCATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCCACGGTATGGACGTCTGGGGCCAAGGGACCA  361
V  95.3% (281/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  92.9% (13/14)    IGHD1-26*01  4    ---------------------------------..........C...-------------------------------------------  17
J  96.5% (55/57)    IGHJ6*02     6    --------------------------------------------------.......A.T..............................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_12502  362  CGGTCACCGTCTCCTCA  378
J  96.5% (55/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_189688

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           316     2e-88
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AATGCCA	TTCGGGG	G	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGAAATGCCATTCGGGGGTGCCTTTGATATA	VKEMPFGGAFDI	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  V  F  D  S  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12503  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCGTCTTCGATAGCTATTCTATGCATTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.4% (226/250)  IGHV3-64*05  47   ...................................AC....AG.......G.......C...............................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  V  I  S  S  N  G  E  S  T  F  Y  A  D  S  V  T  G  R  F  T  M  S  R  D  N  S  
                    Query_12503  91   AATTTGTATCAGTTATTAGTAGTAATGGAGAGAGTACATTTTACGCAGACTCAGTGACGGGCAGATTCACCATGTCCAGAGACAATTCCA  180
V  90.4% (226/250)  IGHV3-64*05  137  ...A...T....C...............G.GT..C....AC................A...............C................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  K  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  E  M  P  F  G  G  A  
                    Query_12503  181  AGAACAAACTGTATCTTCAAATGAGCAGTCTGAGACCTGAAGACACCGCTGTGTATTATTGTGTGAAAGAAATGCCATTCGGGGGTGCCT  270
V  90.4% (226/250)  IGHV3-64*05  227  ......CG......G....................G....G.....G...........C...........--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (7/7)     IGHD3-10*01  13   -----------------------------------------------------------------------------.......------  19
J  95.7% (45/47)    IGHJ3*02     4    -------------------------------------------------------------------------------------...T.  8

                                      ------->                                  
                                      F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12503  271  TTGATATATGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  312
J  95.7% (45/47)    IGHJ3*02     9    .......C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_348479

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           363     2e-102
IGHD1-26*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GA	GGTGTAGTGGGAGC	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTAT	ARGGVVGAPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	261	29	0	90


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  Q  P  G  S  S  V  K  V  S  C  K  S  S  G  G  S  F  S  S  Y
                    Query_12504  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGCAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGAGTTCTGGAGGTAGTTTCAGCAGCTA  90
V  90.0% (261/290)  IGHV1-69*01  6    ..................G............A................................GC.........C.CC...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  M  P  L  F  G  I  P  T  Y  A  G
                    Query_12504  91   TGCTGTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGTATCATGCCTCTGTTTGGCATACCAACGTACGCAGG  180
V  90.0% (261/290)  IGHV1-69*01  96   ....A...............................................G.G.....C...A.C.....T.C.G...AC......CA  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  L  Q  G  R  V  T  I  T  A  D  A  S  T  R  T  A  Y  M  E  L  S  S  L  R  S  G  D  T  A
                    Query_12504  181  GAAGTTGCAGGGCAGAGTCACAATAACCGCGGACGCATCCACGAGGACAGCCTACATGGAGTTGAGCAGCCTGAGATCTGGGGACACGGC  270
V  90.0% (261/290)  IGHV1-69*01  186  ......C..............G..T..........A.........C...............C..................A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  V  V  G  A  P  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_12504  271  CATTTATTACTGTGCGAGAGGAGGTGTAGTGGGAGCCCCCTTTGACTATTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  353
V  90.0% (261/290)  IGHV1-69*01  276  .G.G................---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  92.9% (13/14)    IGHD1-26*01  1    ----------------------...A..........-----------------------------------------------  14
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------------.........C............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_348478

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            335     4e-94
IGHD5-12*01                                                                                           10.3    119  
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTAGAGA	TGGCT	TCAGGCGAC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTAGAGATGGCTTCAGGCGACTTGATTAT	ARDRRDGFRRLDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  S  F  W  M  N  W  V  R  Q  P  P  G  K  G  L  
                    Query_12505  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGGTAGTTTTTGGATGAACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-7*01   47   .........................................A....C.A........G.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  T  I  N  Q  D  G  R  E  T  D  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12505  91   AGTGGGTGGCCACCATAAATCAAGATGGACGTGAGACAGACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.8% (232/250)  IGHV3-7*01   137  ............A......G.........A......A.T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  K  S  V  Y  L  E  M  N  I  L  S  A  E  D  T  A  V  F  F  C  A  R  D  R  R  D  G  F  R  
                    Query_12505  181  AGAAGTCAGTGTATCTGGAAATGAACATCCTGAGCGCCGAGGACACGGCTGTATTTTTCTGTGCGAGAGATCGTAGAGATGGCTTCAGGC  270
V  92.8% (232/250)  IGHV3-7*01   227  ....C...C........C.........G......A.................G.A..A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD5-12*01  11   -------------------------------------------------------------------------------.....------  15

                                      ---------->                                  
                                      R  L  D  Y  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_12505  271  GACTTGATTATTGGGGCCAGGGAGTACTGGTCACCGTCTCCTCAG  315
J  88.1% (37/42)    IGHJ4*02     7    ---....C..C............ACC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_189681

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*04                                                                                           383     1e-108
IGHD3-16*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*04	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	TTTCATTC	TTACATTTGGGGG	CGCTAAACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAGATTTCATTCTTACATTTGGGGGCGCTAAACCCCTTGACTTC	AQDFILTFGGAKPLDF	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	268	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  F
                    Query_12506  1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGGTCCAGCCGGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAGCAACTT  90
V  92.1% (268/291)  IGHV3-23*04  6    ..........G.......G...........A.....T........................................C........G..A  95
                                        Q  L  V  E  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  T  N  S  G  G  V  T  Y  Y  A  D
                    Query_12506  91   TGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGGTATTACTAATAGTGGTGGTGTCACATACTACGCGGA  180
V  92.1% (268/291)  IGHV3-23*04  96   .........C...........................................C.....G.GG..........AG............A..  185
                                        A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  R  N  T  I  Y  L  Q  M  N  S  L  R  A  E  D  T  A
                    Query_12506  181  CTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAGGAACACGATTTATCTCCAAATGAATAGCCTGAGGGCCGAGGACACGGC  270
V  92.1% (268/291)  IGHV3-23*04  186  .........................................A.......C.G.....G........C........A..............  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  Q  D  F  I  L  T  F  G  G  A  K  P  L  D  F  W  G  Q  G  T  P  V  T  V  S
                    Query_12506  271  CGTATACTACTGTGCGCAAGATTTCATTCTTACATTTGGGGGCGCTAAACCCCTTGACTTCTGGGGCCAGGGAACCCCGGTCACCGTCTC  360
V  92.1% (268/291)  IGHV3-23*04  276  ......T.........A....---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  K                                                                        
D  92.3% (12/13)    IGHD3-16*01  10   -----------------------------....G........------------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------------------------......A.................T............  43

                                           
                                        S  
                    Query_12506  361  CTCAG  365
J  95.2% (40/42)    IGHJ4*02     44   .....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_189680

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           332     3e-93
IGHD3-3*01                                                                                            10.3    122  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTCTTC	TTTTT	CTCCAAGAGAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTCTTCTTTTTCTCCAAGAGAGAGTCTACTACTTTGACTAC	ARSLLFLQERVYYFDY	245	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	28	25	21	4	0	84
CDR1-IMGT	29	58	30	26	4	0	86.7
FR2-IMGT	59	109	51	50	1	0	98
CDR2-IMGT	110	130	21	20	1	0	95.2
FR3-IMGT	131	244	114	107	7	0	93.9
CDR3-IMGT (germline)	245	249	5	5	0	0	100
Total	N/A	N/A	246	229	17	0	93.1


Alignments

                                      <-------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT------
                                        L  R  L  S  C  T  V  S  G  G  F  I  K  S  G  G  Y  Y  W  S  W  V  R  Q  H  P  G  K  G  L
                    Query_12507  4    CCTGAGACTCTCCTGTACTGTCTCTGGTGGCTTCATCAAGAGTGGTGGCTACTACTGGAGCTGGGTCCGCCAGCACCCAGGGAAGGGCCT  93
V  93.1% (229/246)  IGHV4-31*02  51   ....TCC...A.....................C.....GC........T...............A.........................  140
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  L

                                      ---------------><-----CDR2-IMGT-----><----------------------------------------------------
                                        E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  A  T  S  K
                    Query_12507  94   GGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGCCACGTCTAA  183
V  93.1% (229/246)  IGHV4-31*02  141  ................................G.............C......................C........A.A.........  230
                                        E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K

                                      FR3-IMGT----------------------------------------------------><-------------------CDR3-IMGT
                                        N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  S  L  L  F  L  Q  E  R
                    Query_12507  184  GAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACTGTCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTCTTCTTTTTCTCCAAGAGAG  273
V  93.1% (229/246)  IGHV4-31*02  231  ...................C....C..........C..............................------------------------  296
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                           
D  100.0% (5/5)     IGHD3-3*01   10   --------------------------------------------------------------------------.....-----------  14

                                      ------------------>                                  
                                        V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12507  274  AGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  326
J  100.0% (48/48)   IGHJ4*02     1    -----................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_348471

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           321     6e-90
IGHD3-10*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CAATAAGG	CTATGAATCGGGG	TGCTCCCTCTGGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AATAAGGCTATGAATCGGGGTGCTCCCTCTGGGTAC	NKAMNRGAPSGY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	241	113	107	6	0	94.7
Total	N/A	N/A	241	223	18	0	92.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  I  F  S  T  S  A  M  H  W  I  R  Q  A  P  G  K  G  L  
                    Query_12508  1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCATCTTCAGCACCTCTGCCATGCACTGGATCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.5% (223/241)  IGHV3-30*03  47   ........................C...........C......T.G..A..G..........G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  L  D  G  S  D  K  Y  Y  A  D  S  V  K  G  R  F  T  L  S  R  D  N  S  
                    Query_12508  91   AGTGGGTGGCAGTTATATCGTTGGATGGAAGTGATAAGTACTATGCAGACTCCGTGAAGGGCCGCTTCACCCTCTCCAGAGACAACTCCA  180
V  92.5% (223/241)  IGHV3-30*03  137  ...................A.AT.........A....A..........................A......A.............T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  N  K  A  M  N  R  G  A  P  
                    Query_12508  181  AGAACACCCTGTATCTGCAAATGAACAGCCTGAGACCTGAGGACACGGCTGTCTATTACTGCAATAAGGCTATGAATCGGGGTGCTCCCT  270
V  92.5% (223/241)  IGHV3-30*03  227  .......G...........................G................G........-----------------------------  287
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                
D  84.6% (11/13)    IGHD3-10*01  7    ---------------------------------------------------------------------.....GT......--------  19

                                      ------->                                  
                                      S  G  Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_12508  271  CTGGGTACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  312
J  97.3% (36/37)    IGHJ4*02     12   -----..............................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_348470

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           391     6e-111
IGHD7-27*01                                                                                           12.2    37    
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD7-27*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	CTGGGG	CCTCGGATTCCAATTTCCT	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGGGGCCTCGGATTCCAATTTCCTCTATTACTATGGAATGGACGTC	ATGASDSNFLYYYGMDV	290	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	73	2	0	97.3
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	19	5	0	79.2
FR3-IMGT	176	289	114	103	11	0	90.4
CDR3-IMGT (germline)	290	293	4	4	0	0	100
Total	N/A	N/A	292	271	21	0	92.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  A  S  C  K  A  S  G  G  T  F  S 
                    Query_12509  2    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGCCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  91
V  92.8% (271/292)  IGHV1-69*01  1    .......................G..................................T...............................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  G  I  I  T  A  F  G  T  T  E  Y 
                    Query_12509  92   AGGTATGCCATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCAGGGATCATCACTGCCTTTGGAACAACAGAGTAC  181
V  92.8% (271/292)  IGHV1-69*01  91   ..C.....T..............................................G..........C..AT......T...G..A.C...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       G  Q  K  F  Q  G  R  A  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  E  D 
                    Query_12509  182  GGACAGAAGTTCCAGGGCAGAGCGACGATTACCGCGGACGAATCAACGAGCACAGCCTATATGGAGCTGCGCAGTCTGAGATCTGAAGAC  271
V  92.8% (271/292)  IGHV1-69*01  181  .C....................TC....................C..............C.........A....C...........G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------------CDR3-IMGT-------------------->                     
                                       T  A  A  Y  Y  C  A  T  G  A  S  D  S  N  F  L  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V 
                    Query_12509  272  ACGGCCGCGTATTACTGTGCGACTGGGGCCTCGGATTCCAATTTCCTCTATTACTATGGAATGGACGTCTGGGGCCAAGGGACCACGGTC  361
V  92.8% (271/292)  IGHV1-69*01  271  .......T..............--------------------------------------------------------------------  292
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (6/6)     IGHD7-27*01  5    ----------------------......--------------------------------------------------------------  10
J  94.5% (52/55)    IGHJ6*02     8    -----------------------------------------------...C.....C..T..............................  50

                                                  
                                       T  V  S  S 
                    Query_12509  362  ACCGTCTCCTCA  373
J  94.5% (52/55)    IGHJ6*02     51   ............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_348477

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           308     4e-86
IGHD1-26*01                                                                                           12.2    31   
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTAAGGGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTAAGGGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARSKGIAVIVDAFDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	220	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_12510  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAG  90
V  90.5% (220/243)  IGHV4-59*01  49   ..................A.....................G............................C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  V  S  V  D  M  S  N  N 
                    Query_12510  91   TGGATTGGATATATCTATTACAGAGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAGACATGTCCAACAAC  180
V  90.5% (220/243)  IGHV4-59*01  139  ........G..............T....G.....A......C.....CC................CA.A..........C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  S  K  G  I  A  V  I  V  D 
                    Query_12510  181  CGGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGTGCGAGATCTAAGGGTATCGCTGTTATAGTAGAT  270
V  90.5% (220/243)  IGHV4-59*01  229  .A...........AG.................T.......CG.....G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------------......----  8
J  91.8% (45/49)    IGHJ3*01     2    ---------------------------------------------------------------------------------------...  4

                                      ----------->                                  
                                       A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_12510  271  GCTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  316
J  91.8% (45/49)    IGHJ3*01     5    .........G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_189684

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           358     4e-101
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCACCCAA	TATGGTTCGGAGAGT	CTG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCACCCAATATGGTTCGGAGAGTCTG	ARATQYGSESL	283	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	69	69	68	1	0	98.6
CDR1-IMGT	70	93	24	21	3	0	87.5
FR2-IMGT	94	144	51	46	5	0	90.2
CDR2-IMGT	145	168	24	17	7	0	70.8
FR3-IMGT	169	282	114	100	14	0	87.7
CDR3-IMGT (germline)	283	289	7	7	0	0	100
Total	N/A	N/A	289	259	30	0	89.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_12511  1    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACTTCCTAT  90
V  89.6% (259/289)  IGHV1-18*01  7    .................................................A.................................CAG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  S  W  V  R  Q  A  P  G  G  G  L  E  W  M  G  W  S  G  P  N  N  D  D  A  H  Y  G  H 
                    Query_12511  91   GGTGTCAGCTGGGTGCGCCAGGCCCCTGGAGGAGGGCTTGAATGGATGGGATGGAGCGGCCCTAACAATGATGACGCACACTATGGACAT  180
V  89.6% (259/289)  IGHV1-18*01  97   ...A.............A............CA.........G.............T.A..G..T......G.A..A..A......C...G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  L  R  G  R  V  T  I  T  T  D  T  S  T  T  T  S  F  M  E  L  R  S  L  R  S  A  D  T  A 
                    Query_12511  181  AGCCTCCGGGGCAGAGTCACCATTACCACAGACACATCAACGACCACATCCTTCATGGAGTTGAGGAGCCTGAGATCTGCCGACACGGCC  270
V  89.6% (259/289)  IGHV1-18*01  187  .AG....A...............G..............C....G....G...A.......C..................A..........  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  A  T  Q  Y  G  S  E  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12511  271  GTATATTACTGTGCGAGAGCCACCCAATATGGTTCGGAGAGTCTGTGGGGCCAGGGAACCCTGGTCACAGTCTCCTCAG  349
V  89.6% (259/289)  IGHV1-18*01  277  ..G................------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                              
D  93.3% (14/15)    IGHD3-10*01  8    ---------------------------..........G....-------------------------------------  22
J  97.1% (33/34)    IGHJ4*02     15   ---------------------------------------------.......................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_348475

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           319     2e-89
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	105	9	0	92.1
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	241	27	6	88


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_12512  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.0% (241/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_12512  91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.0% (241/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  F  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_12512  181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTTTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.0% (241/274)  IGHV4-34*01  200  .......A...................................GC......C.....C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_12512  271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.0% (241/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_348474

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         333     1e-93
IGHD5-12*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGAAATA	GGACATAGTGGATACG	GAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGAAATAGGACATAGTGGATACGGAATTGACTAT	ARGEIGHSGYGIDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  L  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_12513    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGCTTTGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-30-3*01  47   ..............................................C......A.................G..................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  F  T  S  F  D  G  T  S  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12513    91   AGTGGGTGGCATTTACATCATTTGATGGAACCAGTAAATACTACGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (231/249)  IGHV3-30-3*01  137  ...........G...T.....A........G..A...........C............................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                        R  N  A  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  S  F  C  A  R  G  E  I  G  H  S  G  
                    Query_12513    181  GGAACGCGCTATCGCTGCAGATGAACAGCCTGAGAGCTGAGGACACGGCTGTATCTTTCTGTGCGAGAGGAGAAATAGGACATAGTGGAT  270
V  92.8% (231/249)  IGHV3-30-3*01  227  A....A....G.AT.....A................................G.A..A...........---------------------  295
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD5-12*01    3    -----------------------------------------------------------------------------...T.......C.  15

                                        ------------->                                  
                                        Y  G  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12513    271  ACGGAATTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  87.5% (14/16)    IGHD5-12*01    16   ...---------------------------------------------  18
J  97.6% (41/42)    IGHJ4*02       7    ------.......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_181455

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           419     2e-119
IGHD7-27*01                                                                                           14.1    9.8   
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTCTCTACAGAACCGTCCTATGGGACA	CTAACTG	TGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCC	ARDPFSTEPSYGTLTVRFDP	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	279	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_12514  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAT  91
V  96.2% (279/290)  IGHV1-18*01  7    .....................................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       P  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  D  T  N  Y  A  Q 
                    Query_12514  92   CCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTGACACAAATTATGCACAG  181
V  96.2% (279/290)  IGHV1-18*01  97   GG..........................................................G...........A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  D  L  R  S  L  T  S  D  D  T  A 
                    Query_12514  182  AAGTTCCAGGGCAGAGTCACCTTGACCACAGACACGTCCACGAGCACAGCCTACATGGACCTGAGGAGCCTGACATCTGACGACACGGCC  271
V  96.2% (279/290)  IGHV1-18*01  187  ...C.................A.............A.......................G.............G................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------CDR3-IMGT------------------------>                  
                                       V  Y  Y  C  A  R  D  P  F  S  T  E  P  S  Y  G  T  L  T  V  R  F  D  P  W  G  Q  G  T  L 
                    Query_12514  272  GTGTATTACTGTGCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCCTGGGGCCAGGGAACCCTG  361
V  96.2% (279/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (7/7)     IGHD7-27*01  1    ---------------------------------------------------.......--------------------------------  7
J  97.8% (44/45)    IGHJ5*02     7    -------------------------------------------------------------.............................  35

                                                      
                                       V  T  V  S  T  
                    Query_12514  362  GTCACCGTCTCCACAG  377
J  97.8% (44/45)    IGHJ5*02     36   ............T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_181457

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           336     1e-94
IGHD3-10*01                                                                                           21.8    0.040
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCCGCCGC	TTCGGGGAGTT	GACGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCCGCCGCTTCGGGGAGTTGACGCTTGACTAC	ARDGRRFGELTLDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  S  V  S  T  N  Y  M  S  W  F  R  Q  A  P  G  K  G  L  
                    Query_12515  1    GGTCCCTGAGACTCTCCTGTGCAGTTTCTGGGTTCAGCGTCAGTACCAATTACATGAGCTGGTTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-53*01  47   ........................CC..........C........G...C............G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  L  Y  S  G  G  V  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_12515  91   AGTGGGTCTCAGTTCTTTATAGTGGTGGTGTCACATTCTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.5% (231/247)  IGHV3-53*01  137  ..............A.......C......AG.....A.....................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  I  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  R  R  F  G  E  L  
                    Query_12515  181  ACACATTGTATCTTCAAATGAATATCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGAGATGGCCGCCGCTTCGGGGAGTTGA  270
V  93.5% (231/247)  IGHV3-53*01  227  ....GC................C.G..............................C...........-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD3-10*01  13   -----------------------------------------------------------------------------...........--  23

                                      ---------->                                  
                                      T  L  D  Y  G  G  Q  G  T  L  V  T  V  S  S  
                    Query_12515  271  CGCTTGACTACGGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ4*02     7    ---........T.................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_181452

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-16*02                                                                                           12.2    32   
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGT	TCGTTA	CCCAATCTTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTTCGTTACCCAATCTTGGCTACTACTACGGTATGGACGTC	ARDRSLPNLGYYYGMDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  M  G  L  E 
                    Query_12516  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGATGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...............................G.........T...........................C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  Y  S  G  T  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_12516  91   TGGATTGGGCATATCTATTACAGTGGGACCACCAGTTACAATCCTTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAT  180
V  93.5% (229/245)  IGHV4-59*01  139  .........T..................G.....AC.....C..C...........................G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  S  L  P  N  L  G  Y 
                    Query_12516  181  CAGTTCTCCCTGAAGCTGAATTCCGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATCGTTCGTTACCCAATCTTGGCTAC  270
V  93.5% (229/245)  IGHV4-59*01  229  ...................GC..T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*02  28   ---------------------------------------------------------------------......---------------  33
J  96.4% (53/55)    IGHJ6*02     8    --------------------------------------------------------------------------------------....  11

                                      ----------------->                                 
                                       Y  Y  G  M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_12516  271  TACTACGGTATGGACGTCTGGGGCCAAGGGGCCACCGTCACCGTCTCCTCA  321
J  96.4% (53/55)    IGHJ6*02     12   ..............................A....G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_181453

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAGGGAGT	AGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCC	ARAGSSGWLDS	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  D  Y  W  S  W  I  R  K  P  P  G  K  G  L  E 
                    Query_12517  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATAACTAGTGACTACTGGAGCTGGATCCGGAAGCCCCCTGGGAAGGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*01  49   .............................T........C.G....T....................C.......A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  D  Y  N  S  S  L  K  S  R  V  T  I  S  F  D  R  S  K  N 
                    Query_12517  91   TGGATTGGATATATCTATTACAGTGGGAGCACCGACTACAATTCCTCCCTCAAGAGTCGAGTCACCATATCATTTGACAGGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*01  139  ........G........................A.......CC.............................G.A....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  G  S  S  G  W  L  D  S 
                    Query_12517  181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGCGAGCAGGGAGTAGTGGCTGGCTTGACTCC  270
V  93.0% (227/244)  IGHV4-59*01  229  ...............C....C..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-19*01  10   ------------------------------------------------------------------------.........---------  18
J  97.5% (39/40)    IGHJ4*02     7    ----------------------------------------------------------------------------------......A.  14

                                                                      
                                       W  G  Q  G  T  L  V  T  V  S  S
                    Query_12517  271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  302
J  97.5% (39/40)    IGHJ4*02     15   ................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_43901

Length=316
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           297     7e-83
IGHD4-17*01                                                                                           16.1    2.0  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCG	ACGGTGAC	ACCGAGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACGGTGACACCGAGAATGACTAC	AADGDTENDY	230	259	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	21	3	0	87.5
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	232	3	3	0	0	100
Total	N/A	N/A	220	205	15	0	93.2


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  L  T  F  S  T  F  G  M  H  W  V  R  Q  P  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_12518  13   GTCTGGACTCACCTTCAGTACCTTTGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTACGA  102
V  93.2% (205/220)  IGHV3-33*01  72   .......T............G..A......................G........................................T..  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  K  E  Y  Y  T  D  S  V  K  G  R  F  I  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_12518  103  TGGAAGTAAGGAATACTATACAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCAAGAACACGTTGTATCTGCAGATGAA  192
V  93.2% (205/220)  IGHV3-33*01  162  .........TA........G........................C............................C..........A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------CDR3-IMGT--------->                       
                                        S  L  R  V  D  D  T  A  M  Y  F  C  A  A  D  G  D  T  E  N  D  Y  W  G  Q  G  T  L  V  T
                    Query_12518  193  CAGCCTGAGAGTCGACGACACGGCTATGTATTTCTGTGCGGCCGACGGTGACACCGAGAATGACTACTGGGGCCAGGGAACCCTGGTCAC  282
V  93.2% (205/220)  IGHV3-33*01  252  ...........C...G.........G......A.......--------------------------------------------------  291
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                   
D  100.0% (8/8)     IGHD4-17*01  6    --------------------------------------------........--------------------------------------  13
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------------------------..............................  37

                                                 
                                        V  S  S  
                    Query_12518  283  CGTCTCCTCAG  293
J  100.0% (41/41)   IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30515799


Query= Query_181458

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     5e-96
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGG	AGCAGCAGCTGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGGAGCAGCAGCTGGTTGACTAC	ARDLEQQLVDY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	24	17	4	3	70.8
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	250	236	11	3	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12519  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCAGTAGTTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-21*01  47   ............................T.................C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  T  T  T     Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12519  91   AGTGGGTCTCATCCATTAGCACTACTACT---TACATATACTACGCTGACTCGGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  177
V  94.4% (236/250)  IGHV3-21*01  137  ...................T.G..G..G.AGT..............A.....A.....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  E  Q  Q  L  V  
                    Query_12519  178  AGAACTCAGTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGGAGCAGCAGCTGGTTG  267
V  94.4% (236/250)  IGHV3-21*01  227  ........C.....C.......................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD6-13*01  7    ---------------------------------------------------------------------------............---  18
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12519  268  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (42/42)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_181459

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           341     5e-96
IGHD2-8*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGCGGGGGGTTTATCATGA	TAATGGTG	GCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGCGGGGGGTTTATCATGATAATGGTGGCCTTGACTTC	ARRRGVYHDNGGLDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	231	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  Y  Y  W  N  W  I  R  Q  T  P  G  K  G  P  E 
                    Query_12520  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAGTTACTACTGGAACTGGATCCGACAGACCCCAGGGAAGGGACCTGAG  90
V  94.7% (231/244)  IGHV4-59*08  49   .......................................A...............G.........G...C...............TG...  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  R  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12520  91   TGGATTGGGTATATCTATTCCAGGGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAAC  180
V  94.7% (231/244)  IGHV4-59*08  139  ...................A...T..................................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  N  L  L  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  R  G  V  Y  H  D  N  G 
                    Query_12520  181  CAGTTCTCCCTGAACCTGCTCTCTGTGACCGCCGCAGACACGGCCGTGTATTATTGTGCGAGACGGCGGGGGGTTTATCATGATAATGGT  270
V  94.7% (231/244)  IGHV4-59*08  229  ..............G...AG.................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD2-8*01   13   -----------------------------------------------------------------------------------.......  19

                                      ----------->                                  
                                       G  L  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12520  271  GGCCTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTTTCCTCAG  316
D  100.0% (8/8)     IGHD2-8*01   20   .---------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    ----......A...........................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_202775

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           310     1e-86
IGHD2-2*01                                                                                            23.8    0.011
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	GCATCGTACAAAT	TATTGTAGTGGTACC	GACTGTTATCC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGGCATCGTACAAATTATTGTAGTGGTACCGACTGTTATCCCTGGTTCGGCCCC	SRHRTNYCSGTDCYPWFGP	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	4	1	0	80
Total	N/A	N/A	242	220	22	0	90.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  L  N  G  S  F  S  D  Y  F  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_12521  1    ACCCTGTCCCTCACCTGCGCTGTCTTGAATGGGTCCTTCAGTGATTACTTCTGGAGCTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  90.9% (220/242)  IGHV4-34*01  49   .........................ATGG..............G.....A...................C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Q  I  N  H  G  G  Y  T  N  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12521  91   TGGATTGGGCAAATCAATCATGGCGGATACACTAACTACAGTCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  90.9% (220/242)  IGHV4-34*01  139  .........G...........A.T...AG...C.......AC................................A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  L  Y  F  C  S  R  H  R  T  N  Y  C  S  G  T 
                    Query_12521  181  CAGTTCTCCCTGAGGCTCAGCTCTGTGACCGCCGCGGACACGGCTCTGTATTTTTGTTCGAGGCATCGTACAAATTATTGTAGTGGTACC  270
V  90.9% (220/242)  IGHV4-34*01  229  .............A...G...........................G......AC...G....----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD2-2*01   5    ---------------------------------------------------------------------------.........A.....  19

                                      ----------------------->                                  
                                       D  C  Y  P  W  F  G  P  W  G  Q  G  T  L  V  T  I  S  S  
                    Query_12521  271  GACTGTTATCCCTGGTTCGGCCCCTGGGGCCAGGGAACCCTGGTCACCATCTCCTCAG  328
J  95.7% (45/47)    IGHJ5*02     5    -----------........A............................G.........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_202774

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12522  1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   ....................T..........G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12522  91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........GT........T.......G...............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_12522  181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.1% (233/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12522  271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_202777

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCCACGGGCTC	AGCAGTGGC	GATGACTCTGTTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCCACGGGCTCAGCAGTGGCGATGACTCTGTTTATGACTAC	VVHGLSSGDDSVYDY	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	241	1	1	0	0	100
Total	N/A	N/A	241	218	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  R  V  S  G  G  S  I  S  D  S  H  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_12523  1    ACCCTGTCCCTCACCTGCCGTGTCTCTGGTGGCTCCATCAGCGACAGTCACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.5% (218/241)  IGHV4-4*02   49   ..................GC......................AGT...A.........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  F  H  S  G  S  A  K  Y  N  P  S  L  Q  S  R  L  T  M  S  L  D  K  S  R 
                    Query_12523  91   GAGTGGATTGGGGAAGTTTTTCACAGTGGGAGCGCCAAGTACAACCCGTCCCTTCAGAGTCGACTCACCATGTCACTAGACAAGTCTAGG  180
V  90.5% (218/241)  IGHV4-4*02   139  ...............A.C.A...T.........A....C..............CA........G.......A...G..........C.A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  K  L  Q  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  H  G  L  S  S  G  D  D 
                    Query_12523  181  AACCAGTTCTCCCTGAAGCTGCAGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGTGGTCCACGGGCTCAGCAGTGGCGATGAC  270
V  90.5% (218/241)  IGHV4-4*02   229  .....................AGC.....................................-----------------------------  289
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  100.0% (9/9)     IGHD6-19*01  7    ---------------------------------------------------------------------------.........------  15

                                      -------------->                                  
                                       S  V  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12523  271  TCTGTTTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (41/41)   IGHJ4*02     8    --------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_202770

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            294     6e-82
IGHD1-26*01                                                                                           10.3    118  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAACTTTCGCGACATAT	GAGCT	CCA	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAACTTTCGCGACATATGAGCTCCATATGGACGTC	AKTFATYELHMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	98	16	0	86
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	216	28	0	88.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  H  N  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_12524  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTCATAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGTAAGGGCCTG  90
V  88.5% (216/244)  IGHV4-4*02   49   ..................G.................A........AG...........G.....................G.....G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  N  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  M  S  M  A  K  L  K 
                    Query_12524  91   GAGTGGATTGGAGAAATCTATCATAACGGCAACACCAACTACAACCCGTCCCTCCAGAGTCGGGTCACCATGTCAATGGCCAAGTTGAAG  180
V  88.5% (216/244)  IGHV4-4*02   139  ...........G.............GT..G.G......................A.......A........A...G.A.A.....CC...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  F  F  L  K  L  N  D  A  T  A  A  D  T  A  V  Y  Y  C  A  K  T  F  A  T  Y  E  L  H 
                    Query_12524  181  AATCAGTTCTTCCTGAAACTGAACGATGCGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAAAACTTTCGCGACATATGAGCTCCAT  270
V  88.5% (216/244)  IGHV4-4*02   229  ..C.......C......G....G.TC..T.....................G.............--------------------------  292
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (5/5)     IGHD1-26*01  11   ---------------------------------------------------------------------------------.....----  15
J  97.7% (42/43)    IGHJ6*02     20   -----------------------------------------------------------------------------------------.  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_12524  271  ATGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  312
J  97.7% (42/43)    IGHJ6*02     21   ...............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_202772

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            391     6e-111
IGHD3-16*01                                                                                           12.2    34    
IGHJ3*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GCTTCC	TGGGGG	CCATGAGA	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATC	ARGFLGAMRDGLDI	269	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	76	30	27	3	0	90
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	154	27	27	0	0	100
FR3-IMGT	155	268	114	109	5	0	95.6
CDR3-IMGT (germline)	269	275	7	7	0	0	100
Total	N/A	N/A	274	262	12	0	95.6


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  N  N  S  D  T  W  N  W  I  R 
                    Query_12525  2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAACAACAGTGATACTTGGAACTGGATCAGG  91
V  95.6% (262/274)  IGHV6-1*01   31   ........G...T.G..............................................G........C.G.................  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 
                    Query_12525  92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGGAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGA  181
V  95.6% (262/274)  IGHV6-1*01   121  ................................A.........................................................  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  I  N  P  D  S  S  K  N  Q  F  S  L  Q  L  N  S  V  T  F  E  D  T  A  V  Y  F  C  A 
                    Query_12525  182  ATAACCATTAACCCAGACTCATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTTTCGAGGACACGGCTGTGTATTTCTGTGCA  271
V  95.6% (262/274)  IGHV6-1*01   211  ........C.........A.........................................CC....................A.......  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------------CDR3-IMGT--------------->                                  
                                       R  G  F  L  G  A  M  R  D  G  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12525  272  AGAGGCTTCCTGGGGGCCATGAGAGATGGTTTAGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  344
V  95.6% (262/274)  IGHV6-1*01   301  ....---------------------------------------------------------------------  304
                                       R                                                                       
D  100.0% (6/6)     IGHD3-16*01  17   ----------......---------------------------------------------------------  22
J  95.9% (47/49)    IGHJ3*02     2    ------------------------....C...T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_212028

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            357     1e-100
IGHD6-13*01                                                                                           12.2    33    
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCAC	TACACAGACAACCTTTG	GCAGCA	ACTTCTTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACTACACAGACAACCTTTGGCAGCAACTTCTTTC	ALHRQPLAATSF	263	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	46	5	0	90.2
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	106	8	0	93
CDR3-IMGT (germline)	263	266	4	4	0	0	100
Total	N/A	N/A	266	247	19	0	92.9


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  R  S  T  G  V  G  V  E  W  I  R
                    Query_12526  1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGCTTCTCACTCAGAAGTACTGGAGTGGGTGTAGAGTGGATCCG  90
V  92.9% (247/266)  IGHV2-5*01   30   ................................................G...........C.C..G............G.GC........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  E  D  E  R  Y  S  P  S  L  K  N  R  L  T
                    Query_12526  91   TCAGCCCCCCGGAAAGGCCCTAGAGTGGCTTGCACTCATTTATTGGAATGAAGATGAGCGCTACAGCCCTTCTCTGAAGAACAGACTCAC  180
V  92.9% (247/266)  IGHV2-5*01   120  .........A...........G.............................T...A.............A..........G...G.....  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  T  K  D  T  S  R  N  Q  V  V  L  T  M  T  D  M  D  P  V  D  T  A  T  Y  F  C  A  L  H
                    Query_12526  181  CATCACCAAGGACACCTCCAGAAACCAGGTGGTCCTAACAATGACCGACATGGACCCTGTGGACACGGCCACATATTTCTGTGCACTACA  270
V  92.9% (247/266)  IGHV2-5*01   210  ....................A...............T.........A...................A..........A........----  295
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A      

                                      ------CDR3-IMGT------------>                                  
                                        R  Q  P  L  A  A  T  S  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12526  271  CAGACAACCTTTGGCAGCAACTTCTTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  332
D  100.0% (6/6)     IGHD6-13*01  8    -------------......-------------------------------------------  13
J  100.0% (35/35)   IGHJ4*02     14   ---------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_30545

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           277     1e-76
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ATTACTCTGGTTCGGGGA	AAAGTCAAGGATTTCGGAAAT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGATTACTCTGGTTCGGGGAAAAGTCAAGGATTTCGGAAATTGGCTCGACCCC	REIGLLWFGEKSRISEIGSTP	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	242	114	96	17	1	84.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	251	216	34	1	86.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  D  G  G  Y  T  W  N  W  I  R  Q  H  P  Q  K  G 
                    Query_12527  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGTGATGGTGGTTATACCTGGAATTGGATCCGCCAGCACCCACAGAAGGGC  90
V  86.1% (216/251)  IGHV4-31*03  49   ...............................G.........CAG.........CTA.....GC..................GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  A  Y  S  G  R  A  D  Y  N  P  S  L  R  S  R  L  S  V  S  K  D  T  S 
                    Query_12527  91   CTGGAGTGGCTTGGGTCCATCGCTTACAGTGGGAGAGCCGATTACAATCCGTCCCTCAGGAGTCGACTTTCCGTGTCGAAAGACACGTCT  180
V  86.1% (216/251)  IGHV4-31*03  139  .........A......A....TA............CA..T.C.....C..........A.......G..A..A.A..AGT..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  V  S  L  N  V  S  S  V  T  A  A  D   R  P  Y  I  I  V  R  E  I  G  L  L  W  F  G
                    Query_12527  181  AAGAACCAGGTCTCCCTTAACGTGAGCTCTGTGACTGCCGCGGACA-GGCCGTATATTATTGTGCGAGAGATCGGATTACTCTGGTTCGG  269
V  86.1% (216/251)  IGHV4-31*03  229  .........T.......G..GC........................C......G.....C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  3    ---------------------------------------------------------------------------......A........  17

                                      CDR3-IMGT-------------------------->                                  
                                        E  K  S  R  I  S  E  I  G  S  T  P  G  A  R  E  P  R  S  S  S  P  Q 
                    Query_12527  270  GGAAAAGTCAAGGATTTCGGAAATTGGCTCGACCCCCGGGGCCAGGGAACCCAGGTCATCGTCACCTCAG  339
D  94.4% (17/18)    IGHD3-10*01  18   ...-------------------------------------------------------------------  20
J  89.1% (41/46)    IGHJ5*02     6    ------------------------...T........T...............T.....C....T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_166674

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD3-9*01                                                                                            16.1    2.6   
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGAAGGATTCCT	ATATTTTG	GGGAATCGCCATCTC	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGAAGGATTCCTATATTTTGGGGAATCGCCATCTCACGGTATGGACGTC	ARQEGFLYFGESPSHGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  T  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  T  F  T  K  Y
                    Query_12528  1    GCAGCTGGTGCAGTCTGGAACAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGGTCTGGATACACCTTTACCAAATA  90
V  95.2% (277/291)  IGHV5-51*01  6    ...................G................C........................A....T..........G........GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  S  P  G  D  S  N  T  R  Y  S  P
                    Query_12528  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGCAAAGGCCTGGAGTGGATGGGAATCATCTCTCCTGGTGACTCTAATACCAGATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ..............................G....................G.......A.............G................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  V  K  A  S  D  S  A
                    Query_12528  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCGTGAAGGCCTCGGACAGCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  ............................................G.........................C...............C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  Q  E  G  F  L  Y  F  G  E  S  P  S  H  G  M  D  V  W  G  Q  G  T  T  V
                    Query_12528  271  CATGTATTACTGTGCGAGACAAGAAGGATTCCTATATTTTGGGGAATCGCCATCTCACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.2% (277/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-9*01   9    ---------------------------------........-------------------------------------------------  16
J  100.0% (47/47)   IGHJ6*02     16   --------------------------------------------------------..................................  49

                                                   
                                        T  V  S  S 
                    Query_12528  361  CACCGTCTCCTCA  373
J  100.0% (47/47)   IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_117135

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            357     1e-100
IGHD3-10*01                                                                                           10.3    121   
IGHJ6*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TATATATCCTCTCTACCG	CGGGG	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATATATATATCCTCTCTACCGCGGGGGGTATGGACCTT	AKDIYILSTAGGMDL	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	252	10	10	0	0	100
Total	N/A	N/A	252	240	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  K  A  S  G  F  T  F  N  D  Y  A  M  H  W  V  R  Q  T  P  G  K  G  L  
                    Query_12529  1    GGTCCCTGAGACTCTCCTGTAAAGCCTCTGGATTCACCTTTAATGATTATGCCATGCACTGGGTCCGGCAAACTCCAGGGAAGGGCCTGG  90
V  95.2% (240/252)  IGHV3-9*01   47   ....................GC...................G.............................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  T  W  N  S  G  S  M  G  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_12529  91   AGTGGGTCTCAGGTATTACTTGGAATAGTGGTAGTATGGGGTATGCGGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  95.2% (240/252)  IGHV3-9*01   137  ..................G...............C..A..C..............................A..................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  K  D  I  Y  I  L  S  T  
                    Query_12529  181  AGAACTCCCTGTATCTCCAAATGAACAGTCTGAGAGTTGAGGACACGGCCTTATATTACTGTGCAAAAGATATATATATCCTCTCTACCG  270
V  95.2% (240/252)  IGHV3-9*01   227  ................G...................C...............G...................------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                      ---------------->                                 
                                      A  G  G  M  D  L  W  G  Q  G  T  A  V  I  V  S  S 
                    Query_12529  271  CGGGGGGTATGGACCTTTGGGGCCAAGGGACCGCGGTCATCGTCTCCTCA  320
D  100.0% (5/5)     IGHD3-10*01  15   .....---------------------------------------------  19
J  91.1% (41/45)    IGHJ6*02     18   -----.........G.C...............A......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_259920

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           283     1e-78
IGHD3-10*01                                                                                           10.3    116  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	GCCCTTTTAGAG	CGGGG	GC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGCCCTTTTAGAGCGGGGGCCTTTGACTCC	GPFRAGAFDS	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	212	31	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  L  I  F  S  D  Y  S  M  N  W  A  R  Q  A  P  G  K  G  L  
                    Query_12530  1    GGTCCCTGAGACTCTCCTGTGCAGTTTCTGGTTTGATCTTCAGTGACTATAGCATGAACTGGGCCCGCCAGGCTCCCGGTAAGGGGCTGG  90
V  87.2% (212/243)  IGHV3-21*01  47   ........................CC.....A..C.C.......AG.................T............A..G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  S  E  S  N  Y  I  Y  Y  A  D  S  V  R  G  R  F  A  I  S  R  N  N  G  
                    Query_12530  91   AGTGGGTCGCATCCATCAGTAGTGAGAGTAATTACATATACTATGCAGACTCAGTGAGGGGCCGCTTCGCCATCTCCAGAAACAACGGCA  180
V  87.2% (212/243)  IGHV3-21*01  137  ........T.......T......AGT....G............C.............A......A...A...........G......C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  S  S  M  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  G  P  F  R  A  G  A  F  D  
                    Query_12530  181  AGAGTTCAATGTATCTGCAGATGAACAGTCTGAGAGTCGACGACACGGCTGTTTATTATTGTGGCCCTTTTAGAGCGGGGGCCTTTGACT  270
V  87.2% (212/243)  IGHV3-21*01  227  ...AC...C..........A........C.......C...G...........G.....C....---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (5/5)     IGHD3-10*01  15   ---------------------------------------------------------------------------.....----------  19
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------........  12

                                      ->                                  
                                      S  W  G  P  G  T  L  V  T  V  S  S  
                    Query_12530  271  CCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  306
J  95.5% (42/44)    IGHJ4*02     13   A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_259921

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           297     8e-83
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCACCGGTGG	AGCAATGGCTGG	GGAACATACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCACCGGTGGAGCAATGGCTGGGGAACATACTATAATTACGGTATGGACGCC	ARGHRWSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	21	3	6	70
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	221	21	6	89.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  T  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_12531  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGCCCTTCACTGACAGTGGTTATTATTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  89.1% (221/248)  IGHV4-34*12  49   .......................C..T......T......------.......C..C....G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  I  D  T  S 
                    Query_12531  91   CTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAACCCGTCCCTCCAGAGTCGAGTCACCATATCAATAGACACGTCC  180
V  89.1% (221/248)  IGHV4-34*12  133  .....G.............T.......AG.....G......................A....................G...........  222
                                       L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  W  S  N  G 
                    Query_12531  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGGGGCCACCGGTGGAGCAATGGC  270
V  89.1% (221/248)  IGHV4-34*12  223  ....................GC............C........................C........----------------------  290
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_12531  271  TGGGGAACATACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  93.8% (45/48)    IGHJ6*02     15   ------------------.............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_222430

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           344     6e-97
IGHD3-3*01                                                                                            14.1    8.1  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGGCCCC	ARGVGNNWFGP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12532  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  94.4% (234/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  T  L  K  S  R  V  T  I  S  V  A  T  S 
                    Query_12532  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGACCCTCAAGAGCCGAGTTACCATATCAGTAGCCACGTCT  180
V  94.4% (234/248)  IGHV4-31*03  139  .....G.........T.C.................................T..........T...................A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  G  T  A  V  Y  D  C  A  R  G  V  G  N  N  W  F 
                    Query_12532  181  AAGAACCAGTTCTCCCTGAGGCTCAGCTCTGTGACTGCCGCGGGCACGGCCGTGTACGACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  94.4% (234/248)  IGHV4-31*03  229  ...................A...G...................A............TT..........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  94.0% (47/50)    IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                 
                                       G  P  G  G  Q  G  T  L  V  P  V  S  S 
                    Query_12532  271  GGCCCCGGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCA  309
J  94.0% (47/50)    IGHJ5*02     12   .A....T....................A...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_244718

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD3-22*01                                                                                           16.1    2.3   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCAC	ARAPPFDYDLDVRGIHNFDH	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	236	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12533  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (236/244)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_12533  91   TGGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAGC  180
V  96.7% (236/244)  IGHV4-59*01  139  ..........A.................G.............................................A.............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D 
                    Query_12533  181  CAGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGAC  270
V  96.7% (236/244)  IGHV4-59*01  229  ..................AG...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD3-22*01  6    ----------------------------------------------------------------------------........------  13

                                      GT------------------------>                                  
                                       V  R  G  I  H  N  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12533  271  GTAAGGGGAATCCACAACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
J  97.8% (44/45)    IGHJ4*02     4    ----------------........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_244714

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            363     1e-102
IGHD2-15*01                                                                                           10.3    119   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	ACGCCCAA	AGGAT	GACTTCAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGAAAAGATAACGCCCAAAGGATGACTTCAATTGACTCC	GKDNAQRMTSIDS	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	252	10	9	1	0	90
Total	N/A	N/A	252	242	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12534  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.0% (242/252)  IGHV3-9*01   47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  S  W  N  S  G  T  I  G  Y  A  D  S  V  K  G  R  F  N  I  S  R  D  N  A  
                    Query_12534  91   AATGGGTCGCAGGTATTAGTTGGAATAGTGGCACCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCAATATCTCCAGAGACAACGCCA  180
V  96.0% (242/252)  IGHV3-9*01   137  .G......T......................T.G...................................CC...................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  G  K  D  N  A  Q  R  M  T  
                    Query_12534  181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGAGAACTGAGGACACGGCCTTATATTACTGTGGAAAAGATAACGCCCAAAGGATGACTT  270
V  96.0% (242/252)  IGHV3-9*01   227  ..........G........................G................G..........C........------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (5/5)     IGHD2-15*01  1    --------------------------------------------------------------------------------.....-----  5

                                      ---------->                                  
                                      S  I  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12534  271  CAATTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ4*02     7    ---......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_244716

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_12535  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_12535  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_12535  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  D  Q  G  T  A  V  S  V  S  S 
                    Query_12535  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGACCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  89.6% (43/48)    IGHJ6*02     15   ------------------.....T.......T.....G..........A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_244711

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12536  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_12536  91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_12536  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12536  271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_244710

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            374     7e-106
IGHD2-21*01                                                                                           18.0    0.57  
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	T	AGCATATTTTGG	GGACCAAAGTGGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGTAGCATATTTTGGGGACCAAAGTGGCTTC	TRVAYFGDQSGF	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	244	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12537  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTGGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (244/249)  IGHV3-7*01   47   ............................................A.............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  K  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12537  91   AGTGGGTGGCCAATATAAAGCAAGATGGAAGTGAGAAAAAATATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.0% (244/249)  IGHV3-7*01   137  .............C........................T.C.................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  V  A  Y  F  G  D  Q  
                    Query_12537  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTACGAGAGTAGCATATTTTGGGGACCAAA  270
V  98.0% (244/249)  IGHV3-7*01   227  ..............................................................G......---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD2-21*01  1    ----------------------------------------------------------------------........G...--------  12

                                      ------->                                  
                                      S  G  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12537  271  GTGGCTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (35/35)   IGHJ4*02     14   -------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_244713

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           322     2e-90
IGHD2-15*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCAGGGACAG	TGTATTGGTGGTAGGTGCTAC	CCTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGAGCAGGGACAGTGTATTGGTGGTAGGTGCTACCCTGCCTACTTTGACTAC	AREQGQCIGGRCYPAYFDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12538  1    GGTCCCTGAGACTCTCCTGTGCCGCGTCTGGATTCACCTTCAGTACCTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-33*01  47   ......................A......................G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  S  D  G  G  N  K  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  S  S  
                    Query_12538  91   AGTGGGTGGCGCTTATTTGGTCTGATGGAGGTAACAAATATTACTCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCA  180
V  91.2% (228/250)  IGHV3-33*01  137  ..........AG....A....A.......A....T.....C..TG.......................................A.....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      R  N  T  L  S  L  Q  L  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  Q  G  Q  C  I  G  
                    Query_12538  181  GGAATACGCTGTCTCTCCAATTGAACAGCCTGCGAGCCGACGACACGGCTGTTTATTACTGTGCGCGAGAGCAGGGACAGTGTATTGGTG  270
V  91.2% (228/250)  IGHV3-33*01  227  A...C.......A...G...A...........A.......G...........G............A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.5% (19/21)    IGHD2-15*01  8    --------------------------------------------------------------------------------....G.....  17

                                      -IMGT----------------------->                                  
                                      G  R  C  Y  P  A  Y  F  D  Y  W  G  K  G  T  L  V  S  V  S  S  
                    Query_12538  271  GTAGGTGCTACCCTGCCTACTTTGACTACTGGGGCAAGGGAACCCTGGTCTCCGTCTCCTCAG  333
D  90.5% (19/21)    IGHD2-15*01  18   ....C......----------------------------------------------------  28
J  95.7% (45/47)    IGHJ4*02     2    ----------------...................C..............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_244712

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           280     1e-77
IGHD3-9*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGACCCA	TACGGTATTTTG	GCTATTGAGAAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGTGACCCATACGGTATTTTGGCTATTGAGAAG	ATGDPYGILAIEK	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	42	9	0	82.4
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	100	14	0	87.7
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	249	214	35	0	85.9


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  A  S  G  G  S  I  S  S  G  A  N  Y  W  S  W  I  R  Q  S  P  A  K  G  
                    Query_12539  4    CCCTGAGACTCTCCTGTACTGCCTCTGGTGGCTCCATCAGCAGTGGTGCCAACTACTGGAGTTGGATCCGCCAATCCCCTGCAAAGGGCC  93
V  85.9% (214/249)  IGHV4-31*02  50   .....TCC...A.........T..........................GTT..........C...........GCA...A.GG.......  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  G  G  T  T  E  Y  N  P  S  L  K  S  R  L  T  M  S  I  D  P  S  
                    Query_12539  94   TCGAGTGGATTGGATACATCTATTATGGTGGGACCACCGAGTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCCATTGACCCGTCTA  183
V  85.9% (214/249)  IGHV4-31*02  140  .G...........G...........CA......G....T.C...........C............G.T.....A..AG.A...A......  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      T  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  D  P  Y  G  I  L  
                    Query_12539  184  CGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGTGACCCATACGGTATTTTGG  273
V  85.9% (214/249)  IGHV4-31*02  230  A...................C...G...........................G.............G..---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD3-9*01   5    -----------------------------------------------------------------------------....A.......-  16

                                      ---------->                                
                                      A  I  E  K  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12539  274  CTATTGAGAAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  316
J  100.0% (32/32)   IGHJ4*02     15   -----------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_50432

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGATGGCCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTC	VRQSSDGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  S  Y
                    Query_12540  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCAGTTA  90
V  95.5% (278/291)  IGHV5-51*01  6    ....................................C.......................................AG.........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  T  G  L  E  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  S  P
                    Query_12540  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGTGGATGGGGATCATCTTTCCGGATGACTCTGATACCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ................................A..........................A...T.G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12540  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  ............................................G.....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                           
                                        K  Y  Y  C  V  R  Q  S  S  D  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_12540  271  CAAGTATTATTGTGTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  355
V  95.5% (278/291)  IGHV5-51*01  276  ..T......C....C......----------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                   
J  100.0% (42/42)   IGHJ6*02     15   -------------------------------------------..........................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_50433

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            332     3e-93
IGHD2-15*01                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	GTGGTA	CTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACGTGGTACTCGGGGTTTTGACTAC	ARHLGTRGTRGFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	22	2	3	81.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	246	231	12	3	93.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_12541  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  87
V  93.9% (231/246)  IGHV4-4*02   49   ...............................G.....T........GTA.......................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  T  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  I  I  S  L  D  T  S  K 
                    Query_12541  88   GAGTGGATTGGGGAAACCTATCACAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCACTAGACACGTCCAAG  177
V  93.9% (231/246)  IGHV4-4*02   139  ................T......T...........................................C.......G......A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  R  G  T  R 
                    Query_12541  178  AATCAGTTCTCCCTGAATCTCAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACGTGGTACTCGG  267
V  93.9% (231/246)  IGHV4-4*02   229  ..C..............G..G.G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-15*01  15   -------------------------------------------------------------------------------......-----  20

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_12541  268  GGTTTTGACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  313
J  97.7% (42/43)    IGHJ4*02     6    ---.........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_186152

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD3-16*01                                                                                           10.3    117  
IGHJ6*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGG	GGTAAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGGTAATTACTACTACGCTTTGGACGTC	ARGGGNYYYALDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12542  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATAACTAATTATTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   ...............................G......C.G..G...C........C........G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  F  Y  S  G  I  T  S  Y  T  P  S  L  Q  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_12542  91   TGGATTGGCTATATGTTTTACAGTGGGATCACCAGCTACACCCCCTCCCTCCAGAGTCGAGTCACCATGTCAGTCGACACGTCCAAGAAG  180
V  91.4% (223/244)  IGHV4-59*01  139  ........G.....C.A...........G.....A.....A..........A................A.....A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  I  S  L  E  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  N  Y  Y  Y  A  L 
                    Query_12542  181  CAGATCTCCCTGGAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGGGGGGGGTAATTACTACTACGCTTTG  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T........A......G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   ----------------------------------------------------------------.....---------------------  22
J  96.3% (52/54)    IGHJ6*02     9    ---------------------------------------------------------------------------..........G.A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12542  271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  96.3% (52/54)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_142355

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_12543  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_12543  91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y 
                    Query_12543  181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTAC  270
V  91.4% (223/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD2-2*01   8    ---------------------------------------------------------------------........T........----  24
J  88.5% (46/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_12543  271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  318
J  88.5% (46/52)    IGHJ6*02     15   ...GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_186154

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            335     4e-94
IGHD3-22*01                                                                                           21.8    0.042
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAGG	ATTACTTTGATAGGAGT	CGTCACGACGAATT	CGGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCAGGATTACTTTGATAGGAGTCGTCACGACGAATTCGGTCTGGACGTC	ARDQDYFDRSRHDEFGLDV	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	231	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  D  S  F  S  G  D  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12544  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCTTCAGTGGCGATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.1% (231/248)  IGHV4-4*02   49   ...............................G....A....CA.TAG...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  A  I  I  S  I  D  K  S  N 
                    Query_12544  91   GAGTGGATTGGGGAAGTCTATGATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGCCATCATATCAATAGACAAGTCCAAC  180
V  93.1% (231/248)  IGHV4-4*02   139  ...............A.....C..........................................T..C.......G.............G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       K  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  D  Y  F  D  R  S 
                    Query_12544  181  AAACAGTTCTCCCTAAAACTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGACCAGGATTACTTTGATAGGAGT  270
V  93.1% (231/248)  IGHV4-4*02   229  ..C...........G..G....G.............................................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  88.2% (15/17)    IGHD3-22*01  3    -------------------------------------------------------------------------......A......T...  19

                                      MGT----------------------->                                 
                                       R  H  D  E  F  G  L  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_12544  271  CGTCACGACGAATTCGGTCTGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  330
J  95.7% (44/46)    IGHJ6*02     17   --------------....A.......................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_186155

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD7-27*01                                                                                           12.2    36    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGGCCAACCGCCTGGGCGTTAAC	ACTGGG	AC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGCCAACCGCCTGGGCGTTAACACTGGGACCTACTTTGACTCC	ARRANRLGVNTGTYFDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  G  S  G  D  T  F  P  G  Y
                    Query_12545  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGAGACACCTTTCCCGGCTA  90
V  94.8% (275/290)  IGHV5-51*01  6    .............................A...........................................T...G....A..A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  F  P  G  D  S  D  T  K  Y  S  P
                    Query_12545  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAGGGCCTGGAGTGGATGGGGTTCATCTTTCCTGGTGACTCTGATACCAAATACAGCCC  180
V  94.8% (275/290)  IGHV5-51*01  96   .................................A..................A......A....................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  Q  G  Q  V  T  F  S  A  D  K  S  I  G  T  A  Y  L  Q  W  S  R  L  K  A  S  D  T  A
                    Query_12545  181  GGCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCGGCACCGCCTACCTGCAGTGGAGTAGGTTGAAGGCCTCGGACACCGC  270
V  94.8% (275/290)  IGHV5-51*01  186  .T....................A....................A......................C..CC...................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  R  A  N  R  L  G  V  N  T  G  T  Y  F  D  S  W  G  Q  G  T  L  V  S  V
                    Query_12545  271  CATGTATTACTGTGCGAGACGGGCCAACCGCCTGGGCGTTAACACTGGGACCTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCTCCGT  360
V  94.8% (275/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD7-27*01  4    -------------------------------------------......-----------------------------------------  9
J  95.7% (45/47)    IGHJ4*02     2    ---------------------------------------------------...........A......................A....  40

                                              
                                        S  S  
                    Query_12545  361  CTCCTCAG  368
J  95.7% (45/47)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_50434

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*03                                                                                           344     6e-97
IGHD2-8*01                                                                                            21.8    0.042
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*03	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCCTGG	ATTGCACTGATGGTGTCTGTTAT	GCTTTTGCCCAA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATCGCCTGGATTGCACTGATGGTGTCTGTTATGCTTTTGCCCAA	VKDRLDCTDGVCYAFAQ	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  N  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12546  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACATTCAGTAACTATGCTATGCACTGGGTCCGCCAGGCTCCTGGGAAGGGACTGG  90
V  94.0% (235/250)  IGHV3-64*03  47   .....................................C.......G..............................A.............  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  P  N  G  G  S  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12546  91   AATATGTTTCAGCGATTAGTCCTAATGGAGGTAGTACATACTTCGCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-64*03  137  .............T......AG......G.....C.......A...............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  D  R  L  D  C  T  D  
                    Query_12546  181  GGAACACTCTATATCTCCAAATGAGCAGTCTGAGAGCTGAGGACACGGCTCTCTATTACTGTGTGAAAGATCGCCTGGATTGCACTGATG  270
V  94.0% (235/250)  IGHV3-64*03  227  A......G..G...G...................................G.G.................--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  82.6% (19/23)    IGHD2-8*01   6    ------------------------------------------------------------------------------....T...A...  17

                                      GT-------------------->                                 
                                      G  V  C  Y  A  F  A  Q  W  G  Q  G  T  L  I  T  V  S  S 
                    Query_12546  271  GTGTCTGTTATGCTTTTGCCCAATGGGGCCAGGGAACCCTGATCACCGTCTCCTCA  326
D  82.6% (19/23)    IGHD2-8*01   18   ....A..C...---------------------------------------------  28
J  97.0% (32/33)    IGHJ4*02     15   -----------------------..................G..............  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_186157

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            293     2e-81
IGHD4-4*01                                                                                            16.1    2.1  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGCTTCTGGAGA	TGACTACA	ATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGCTTCTGGAGATGACTACAATCTTGACTCC	ARVASGDDYNLDS	237	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	18	6	0	75
FR3-IMGT	123	236	114	103	11	0	90.4
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	231	209	22	0	90.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  S  F  S  D  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  Y  I  
                    Query_12547  13   GTGCAGCCTCTGGATTCAGCTTTAGTGACTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCTACATAA  102
V  90.5% (209/231)  IGHV3-7*03   65   ..................C.......AG............C..........................................A......  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  H  D  S  T  E  K  Y  Y  V  E  S  L  R  G  R  L  T  I  S  R  D  N  A  K  N  S  L  F  L  
                    Query_12547  103  ACCATGATTCAACTGAGAAGTACTATGTGGAGTCATTGAGGGGCCGACTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTTTCTCC  192
V  90.5% (209/231)  IGHV3-7*03   155  .G..A...GG..G......A...........C..TG...A.......T....................................A...G.  244
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><--------------CDR3-IMGT-------------->       
                                      Q  M  E  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  A  S  G  D  D  Y  N  L  D  S  W  G  
                    Query_12547  193  AAATGGAGAGCCTGAGAGCCGACGACACGGCCGTTTATTACTGTGCGAGAGTCGCTTCTGGAGATGACTACAATCTTGACTCCTGGGGCC  282
V  90.5% (209/231)  IGHV3-7*03   245  .....A.C..............G...........G................---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (8/8)     IGHD4-4*01   1    ----------------------------------------------------------------........------------------  8
J  92.9% (39/42)    IGHJ4*02     7    ---------------------------------------------------------------------------......A........  21

                                                                 
                                      Q  G  T  L  V  S  V  S  S  
                    Query_12547  283  AGGGTACCCTGGTCTCCGTCTCCTCAG  309
J  92.9% (39/42)    IGHJ4*02     22   ....A.........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_186158

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAAGACTACTTTGAAGA	TAGTGCTTATTAC	N/A	TTCAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAAGACTACTTTGAAGATAGTGCTTATTACTTCAACCTC	AKDKDYFEDSAYYFNL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  R  R  S  A  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_12548  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTTAGGAGGTCTGCCATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-23*01  47   ....................G......................C..C.A.......A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  E  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12548  91   AGTGGGTCTCATCTATAAGTGGCAGTGGTGAAAAAACATATTACGCAGACTCCGTGAAGGGCCGCTTCACGATCTCCAGAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-23*01  137  ...........G....T.....T.......GT.GC.....C.......................G.....C...................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  T  S  L  R  A  E  D  M  A  L  Y  Y  C  A  K  D  K  D  Y  F  E  D  
                    Query_12548  181  AGAACACGCTGTATCTACAAATGACCAGCCTGAGAGCCGAGGACATGGCCCTTTATTACTGTGCGAAAGATAAAGACTACTTTGAAGATA  270
V  92.0% (230/250)  IGHV3-23*01  227  ................G.......A....................C....G.A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.3% (12/13)    IGHD3-22*01  16   ----------------------------------------------------------------------------------------..  17

                                      T------------------>                                  
                                      S  A  Y  Y  F  N  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12548  271  GTGCTTATTACTTCAACCTCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  324
D  92.3% (12/13)    IGHD3-22*01  18   ...G.......-------------------------------------------  28
J  93.0% (40/43)    IGHJ5*02     9    -----------...G...C...............C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_186159

Length=316
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*04                                                                                           324     7e-91
IGHD1-1*01                                                                                            16.1    2.0  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*04	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	T	CAAGTGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	238	258	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
Total	N/A	N/A	237	222	15	0	93.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12549  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGTGGTTATTCCTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTGGAG  90
V  93.7% (222/237)  IGHV4-59*04  49   ...................C......................A....C.A.................................A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12549  91   TGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCCAAGAAC  180
V  93.7% (222/237)  IGHV4-59*04  139  .........TA....T..........................C.........A...............G..A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----CDR3-IMGT----->            
                                       Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G  Q  G 
                    Query_12549  181  CAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGCCAGGGA  270
V  93.7% (222/237)  IGHV4-59*04  229  ............A.......C................................C...---------------------------------  285
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                                  
D  90.9% (10/11)    IGHD1-1*01   5    ----------------------------------------------------------...C.......---------------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------.................  26

                                                           
                                       T  L  V  T  V  S  S 
                    Query_12549  271  ACCCTGGTCACCGTCTCCTCA  291
J  100.0% (38/38)   IGHJ4*02     27   .....................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30515799


Query= Query_142358

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD6-19*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTGCCTTCGGTCCGA	ATAGCAGT	TGACAGGGGCTCCTC	CGGCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGCCTTCGGTCCGAATAGCAGTTGACAGGGGCTCCTCCGGCATGGACGTC	ARLPSVRIAVDRGSSGMDV	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12550  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (230/243)  IGHV4-59*01  49   ........................................................C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  D  S  E  T  T  K  Y  N  P  S  L  R  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_12550  91   TGGATTGGCTATATCTATGACAGTGAGACCACCAAGTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  94.7% (230/243)  IGHV4-59*01  139  ........G.........T......G..G......C................A....................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  T  V  T  S  V  T  P  A  D  T  A  V  Y  F  C  A  R  L  P  S  V  R  I  A  V  D 
                    Query_12550  181  CAGTTCTCCCTGACGGTGACCTCTGTGACCCCTGCGGACACGGCCGTGTATTTCTGTGCGAGATTGCCTTCGGTCCGAATAGCAGTTGAC  270
V  94.7% (230/243)  IGHV4-59*01  229  .............A.C...G..........G.....................A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  5    ------------------------------------------------------------------------------........----  12

                                      ----------------------->                                 
                                       R  G  S  S  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12550  271  AGGGGCTCCTCCGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  327
J  97.8% (45/46)    IGHJ6*02     17   -----------...T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_253141

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           343     2e-96
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCGGCGGG	TTGTGGTAGTACCGGCTGCTATG	GAAAT	AACCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCGGCGGGTTGTGGTAGTACCGGCTGCTATGGAAATAACCGGTTCGACCCC	AREAAGCGSTGCYGNNRFDP	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12551  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (232/245)  IGHV4-59*01  49   .............................................T............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  D  H  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12551  91   TGGATTGGGTATATCCATTACAGTGGAAGCACCGACCACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTTGACACGTCCAAGAAC  180
V  94.7% (232/245)  IGHV4-59*01  139  ...............T..........G......A..T...............................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  I  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  A  G  C  G  S  T  G 
                    Query_12551  181  CAGATCTCCCTGAAGGTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGCGCGAGAGAAGCGGCGGGTTGTGGTAGTACCGGC  270
V  94.7% (232/245)  IGHV4-59*01  229  ...T...........C...G...........................G.....C..T........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.3% (21/23)    IGHD2-2*01   7    --------------------------------------------------------------------------....A........A..  22

                                      GT------------------------>                                  
                                       C  Y  G  N  N  R  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12551  271  TGCTATGGAAATAACCGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  91.3% (21/23)    IGHD2-2*01   23   .......------------------------------------------------------  29
J  98.0% (48/49)    IGHJ5*02     3    ------------...T.............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_139565

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTAGA	GTAA	ACTATGATACTAGTG	ACGCAGTATG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGTAAACTATGATACTAGTGACGCAGTATGC	TRVNYDTSDAVC	249	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	112	2	0	98.2
CDR3-IMGT (germline)	249	254	6	6	0	0	100
Total	N/A	N/A	254	248	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  F  S  G  S  A  I  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_12552  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCCCCTTCAGTGGCTCTGCTATACACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  97.6% (248/254)  IGHV3-73*01  47   .........A.........................A...................G..................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  N  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_12552  91   AGTGGGTTGGCCGTATTAGAAACAAAGCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATG  180
V  97.6% (248/254)  IGHV3-73*01  137  .....................G....................................................................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------CDR3-IMG
                                      D  S  K  N  T  A  F  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  V  N  Y  D  T  
                    Query_12552  181  ATTCAAAGAACACGGCGTTTCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTATATTACTGTACTAGAGTAAACTATGATACTA  270
V  97.6% (248/254)  IGHV3-73*01  227  ..................A.......................................G...............----------------  300
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  93.3% (14/15)    IGHD3-22*01  6    ------------------------------------------------------------------------------.........G..  17

                                      T------------>                                  
                                      S  D  A  V  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12552  271  GTGACGCAGTATGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  93.3% (14/15)    IGHD3-22*01  18   ...---------------------------------------------  20
J  100.0% (35/35)   IGHJ4*02     14   -------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_340608

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           408     4e-116
IGHD1-26*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTGTTTTC	TGGGACCTACTAC	CTTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTAC	ARVFSGTYYLLDY	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	69	5	0	93.2
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	110	4	0	96.5
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	277	16	0	94.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  P  C  T  A  F  G  Y  S  L  T  
                    Query_12553  4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCCCCTGTACGGCTTTTGGATACAGCCTTACCA  93
V  94.5% (277/293)  IGHV5-51*03  2    ..G........................................................T......A..G..C..........T......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  R  D  G  E  T  R  Y  
                    Query_12553  94   GTTATTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTCGTGACGGTGAAACCAGATACA  183
V  94.5% (277/293)  IGHV5-51*03  92   .C..C...............................................................G.....TC...T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  
                    Query_12553  184  GCCCGTCCTTCCAAGGCCAGGTCAGCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACC  273
V  94.5% (277/293)  IGHV5-51*03  182  ........................C....................................................A...........A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                
                                      P  A  M  Y  Y  C  A  R  V  F  S  G  T  Y  Y  L  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12553  274  CCGCCATGTATTATTGTGCGAGAGTGTTTTCTGGGACCTACTACCTTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  361
V  94.5% (277/293)  IGHV5-51*03  272  .............C.........-----------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                  
D  92.3% (12/13)    IGHD1-26*01  8    -------------------------------.....G.......--------------------------------------------  20
J  100.0% (40/40)   IGHJ4*02     7    ------------------------------------------------........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_340609

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           350     8e-99
IGHD6-13*01                                                                                           18.0    0.60 
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	GGTATAGCA	ATGCCTATTACCCCGTGGATTT	GTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGTATAGCAATGCCTATTACCCCGTGGATTTGTTCGACCCC	ARDRYSNAYYPVDLFDP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  P  F  S  S  Y  G  M  H  W  V  R  Q  S  P  G  K  G  L  
                    Query_12554  1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCCCTTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGTCTCCAGGCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-33*01  47   ....................G..............A.C.................................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  D  D  G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12554  91   AGTGGGTGGCAGTGATATGGGATGATGGAAGTAATAAGTTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (237/250)  IGHV3-33*01  137  .............T......T................A.A..................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  N  D  T  A  V  Y  Y  C  A  R  D  R  Y  S  N  A  Y  
                    Query_12554  181  AGAACACTCTGTATCTACAAATGAACAGCCTGAGAGCCAATGACACGGCTGTCTATTACTGTGCGAGAGATCGGTATAGCAATGCCTATT  270
V  94.8% (237/250)  IGHV3-33*01  227  .......G........G.....................G.G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-13*01  2    ------------------------------------------------------------------------.........---------  10

                                      GT-------------------->                                  
                                      Y  P  V  D  L  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12554  271  ACCCCGTGGATTTGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (44/44)   IGHJ5*02     8    -------------............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_74739

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD5-18*01                                                                                           39.1    2e-07
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	TACTGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTGATTTGACTAC	QTWIQLWLLLI*L	236	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	235	114	109	3	2	95.6
CDR3-IMGT (germline)	236	241	6	5	1	0	83.3
Total	N/A	N/A	243	235	6	2	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12555  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (235/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  N  T  N  Y  I  P  S  L  K  S  R  V  T  I  S  V    D  V  Q  E  
                    Query_12555  91   TGGATTGGGTATATCTATTACAGTGGGAATACCAACTATATCCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAG--ACGTCCAAGAAC  178
V  96.7% (235/243)  IGHV4-59*01  139  ............................GC........C.A...................................AC............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                      P  V  L  P  E  A  E  L  C  D  R  C  G  H  G  L  V  L  L  C  Q  T  W  I  Q  L  W  L  L  L  
                    Query_12555  179  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCTTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTGA  268
V  96.7% (235/243)  IGHV4-59*01  229  .............................................G.............G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20

                                      -------->                                  
                                      I  *  L  L  G  P  G  N  P  G  H  R  L  L   
                    Query_12555  269  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  311
J  100.0% (43/43)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_327512

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           336     1e-94
IGHD3-16*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCGTGCTCTTA	ATTATGATTA	TACTAGTTTTAATTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CGTGCTCTTAATTATGATTATACTAGTTTTAATTGGTACTTTGACTTC	RALNYDYTSFNWYFDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	241	113	110	3	0	97.3
Total	N/A	N/A	241	228	13	0	94.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12556  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCATCTTCAGTAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.6% (228/241)  IGHV3-33*01  47   ....................................C........GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  D  Y  L  G  S  N  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12556  91   AGTGGGTGGCACTTATAGACTATCTTGGAAGTAATAAGTATTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.6% (228/241)  IGHV3-33*01  137  ...........G.....TGG...GA............A..C....C............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  R  A  L  N  Y  D  Y  T  S  
                    Query_12556  181  AGAACACCCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGCCGTGCTCTTAATTATGATTATACTAGTT  270
V  94.6% (228/241)  IGHV3-33*01  227  .......G.....................................................-----------------------------  287
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                
D  100.0% (10/10)   IGHD3-16*01  3    ------------------------------------------------------------------------..........--------  12

                                      T------------------>                                  
                                      F  N  W  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12556  271  TTAATTGGTACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.8% (45/46)    IGHJ4*02     3    --------..........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_340600

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           332     3e-93
IGHD3-22*01                                                                                           39.1    2e-07
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATCCC	GTATTACCAGGATAGTAGTGGTTATT	GGGGGATG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATCCCGTATTACCAGGATAGTAGTGGTTATTGGGGGATGGACTAC	ARIPYYQDSSGYWGMDY	230	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	24	0	0	100
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	111	3	0	97.4
CDR3-IMGT (germline)	230	235	6	6	0	0	100
Total	N/A	N/A	222	217	5	0	97.7


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  S  S  S 
                    Query_12557  14   TCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTAGTAGTAGT  103
V  97.7% (217/222)  IGHV3-48*03  73   ..........................................................................................  162
                                       S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  S  S  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       D  N  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 
                    Query_12557  104  GATAATACCATATACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCAAATGAAC  193
V  97.7% (217/222)  IGHV3-48*03  163  .G..G............C........................................................................  252
                                       G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><--------------------CDR3-IMGT-------------------->   
                                       S  L  G  A  E  D  M  A  V  Y  Y  C  A  R  I  P  Y  Y  Q  D  S  S  G  Y  W  G  M  D  Y  W 
                    Query_12557  194  AGCCTGGGAGCCGAGGACATGGCTGTTTATTACTGTGCGAGAATCCCGTATTACCAGGATAGTAGTGGTTATTGGGGGATGGACTACTGG  283
V  97.7% (217/222)  IGHV3-48*03  253  ......A............C......................------------------------------------------------  294
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  92.3% (24/26)    IGHD3-22*01  1    -----------------------------------------------.......T.T................-----------------  26
J  100.0% (40/40)   IGHJ4*02     9    ---------------------------------------------------------------------------------.........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_12557  284  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  314
J  100.0% (40/40)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_74736

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           349     2e-98
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	AATCAC	GTATCACTATGATAATAATGGTTAT	AAG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAATCACGTATCACTATGATAATAATGGTTATAAGTACTTTGACTAC	ARGITYHYDNNGYKYFDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_12558  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTGGAA  90
V  95.5% (234/245)  IGHV4-34*01  49   ........................................................C...A............................G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  I  N  H  G  G  D  S  K  *  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12558  91   TGGCTTGGGGAAATCAATCATGGTGGAGACTCTAAGTAAAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-34*01  139  ...A.................A.....AG.A.C..C..C...................................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  I  T  Y  H  Y  D  N  N 
                    Query_12558  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGAATCACGTATCACTATGATAATAAT  270
V  95.5% (234/245)  IGHV4-34*01  229  .................................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  88.0% (22/25)    IGHD3-22*01  1    -----------------------------------------------------------------------....T.........G..G.  19

                                      -------------------->                                  
                                       G  Y  K  Y  F  D  Y  W  S  Q  G  T  L  V  T  V  S  S  
                    Query_12558  271  GGTTATAAGTACTTTGACTACTGGAGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  88.0% (22/25)    IGHD3-22*01  20   ......-------------------------------------------------  25
J  97.8% (45/46)    IGHJ4*02     3    ---------...............G..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_23573

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           353     1e-99
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ3*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAAGCGAAGTTCG	ATTACGATTTTTGGAGTGGTT	CACGTTTTGT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAAGCGAAGTTCGATTACGATTTTTGGAGTGGTTCACGTTTTGTTGCTTTTGAGGTC	AKDKAKFDYDFWSGSRFVAFEV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  A  F  T  F  S  C  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12559  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGCATTCACCTTTAGCTGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-23*01  47   ..............................G.............A.C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  S  G  E  S  T  Y  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  S  
                    Query_12559  91   AGTGGGTCTCTGTTATTAGTGGTAGTGGTGAAAGCACATACTACGCAGACTCGGTGACGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (238/250)  IGHV3-23*01  137  ..........A.C.................GT....................C....A................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  K  A  K  F  D  Y  
                    Query_12559  181  AGAACACACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATATTACTGTGCGAAAGATAAAGCGAAGTTCGATTACG  270
V  95.2% (238/250)  IGHV3-23*01  227  .......G....A.....................................G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (21/21)   IGHD3-3*01   3    ------------------------------------------------------------------------------------......  8

                                      -CDR3-IMGT--------------------------->                                
                                      D  F  W  S  G  S  R  F  V  A  F  E  V  R  G  Q  G  T  M  V  T  V  S  S
                    Query_12559  271  ATTTTTGGAGTGGTTCACGTTTTGTTGCTTTTGAGGTCCGGGGCCAAGGGACAATGGTCACCGTCTCTTC  340
D  100.0% (21/21)   IGHD3-3*01   9    ...............-------------------------------------------------------  23
J  95.6% (43/45)    IGHJ3*01     4    -------------------------.........T...T...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_23572

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*06                                                                                           325     3e-91
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*06	IGHD3-10*01	IGHJ4*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	TCGGGG	TTCTCACACTAACCCCTTTTTCG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGGGGTTCTCACACTAACCCCTTTTTCGTAC	AKDRGSHTNPFFV	243	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  N  F  S  N  Y  G  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12560  1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCAATTTCAGTAATTATGGCCTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-33*06  47   .......................G.G..........CC.......GC......A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  R  K  Y  Y  A  D  S  V  R  G  R  F  I  I  S  R  D  N  S  
                    Query_12560  91   AGTGGGTGGCAGTTATTTGGTATGATGGAAGTAGGAAATACTATGCAGACTCCGTGAGGGGCCGATTTATCATCTCCAGAGACAATTCTA  180
V  91.6% (229/250)  IGHV3-33*06  137  ................A................AT......................A.........C.C..................C.  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------CDR3-IMGT---
                                      K  N  T  V  Y  L  Q  M  N  S  L  G  G  E  D  T  A  M  Y  Y  C  A  K  D  R  G  S  H  T  N  
                    Query_12560  181  AGAATACAGTGTATCTACAAATGAACAGCCTGGGAGGCGAGGACACGGCTATGTATTACTGTGCGAAAGATCGGGGTTCTCACACTAACC  270
V  91.6% (229/250)  IGHV3-33*06  227  ....C..GC.......G...............A...C.............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD3-10*01  14   ----------------------------------------------------------------------......--------------  19

                                      ----------->                                  
                                      P  F  F  V  L  G  P  G  N  P  G  H  R  L  L   
                    Query_12560  271  CCTTTTTCGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (37/37)   IGHJ4*02     12   ---------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_340604

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12561  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12561  91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_12561  181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  95.5% (231/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12561  271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_340605

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           300     9e-84
IGHD3-3*01                                                                                            41.1    7e-08
IGHJ3*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTCGCCAA	ATTACGATTTTTGGAATGGCTATTATA	TTACCAAAAAAGGA	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCGCCAAATTACGATTTTTGGAATGGCTATTATATTACCAAAAAAGGAGCTTTTGATGTC	ARESPNYDFWNGYYITKKGAFDV	236	304	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	11	1	0	91.7
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	45	6	0	88.2
CDR2-IMGT	101	121	21	19	2	0	90.5
FR3-IMGT	122	235	114	107	7	0	93.9
CDR3-IMGT (germline)	236	243	8	8	0	0	100
Total	N/A	N/A	230	211	19	0	91.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  V  S  G  F  T  I  S  S  S  N  I  N  W  V  R  Q  L  P  G  K  G  L  E  W  V  S  F  I 
                    Query_12562  14   TGTGCAGTCTCTGGGTTCACCATCAGTAGCAGCAACATAAACTGGGTCCGCCAGCTTCCCGGGAAGGGGCTGGAGTGGGTCTCATTTATT  103
V  91.7% (211/230)  IGHV3-53*01  64   .......C.............G.........A.T....G.G.............GC...A........................G.....  153
                                       C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I 

                                      ---CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-----------
                                       Y  S  G  G  S  T  Y  Y  A  D  S  V  R  G  R  F  T  V  S  G  D  N  S  K  N  T  L  Y  L  Q 
                    Query_12562  104  TATAGTGGTGGCAGCACATACTACGCAGACTCCGTGAGGGGCCGATTCACCGTCTCCGGAGACAATTCCAAGAACACTCTGTATCTTCAA  193
V  91.7% (211/230)  IGHV3-53*01  154  .....C.....T.........................A.............A.....A...................G............  243
                                       Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 

                                      -----------------------------------------><-----------------------------CDR3-IMGT---------
                                       M  E  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  E  S  P  N  Y  D  F  W  N  G  Y  Y  I  T 
                    Query_12562  194  ATGGAAAGCCTGAGACCCGAGGACACGGCCGTGTATTACTGTGCGAGAGAGTCGCCAAATTACGATTTTTGGAATGGCTATTATATTACC  283
V  91.7% (211/230)  IGHV3-53*01  244  ...A.C.........G..................................----------------------------------------  293
                                       M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                           
D  92.6% (25/27)    IGHD3-3*01   3    ----------------------------------------------------------...............G...T.......-----  29

                                      -------------------->                                  
                                       K  K  G  A  F  D  V  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12562  284  AAAAAAGGAGCTTTTGATGTCTGGGGCCAAGGGACATTGGTCACCGTCTCTTCAG  338
J  97.8% (45/46)    IGHJ3*01     5    ---------...........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_95136

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*04                                                                                           299     2e-83
IGHD2-21*01                                                                                           10.3    124  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*04	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATAAAGACCCCGGAGGGCGC	CTATT	TCTCG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATAAAGACCCCGGAGGGCGCCTATTTCTCGTACTACGGTATGGACGTC	ARIKTPEGAYFSYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	219	28	0	88.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  D  F  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12563  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTCAGTGATTTTACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGC  90
V  88.7% (219/247)  IGHV3-21*04  47   .....................C......................AGC.A..G.................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  S  S  G  T  Y  T  Y  Y  A  D  S  L  Q  G  R  F  T  I  A  R  D  N  A  
                    Query_12563  91   AGTGGGTGTCATCCATTAGTAGTAGTGGGACTTACACATACTACGCAGACTCACTTCAGGGCCGATTCACCATCGCCAGAGACAACGCCA  180
V  88.7% (219/247)  IGHV3-21*04  137  .......C..................A.T.G.....T................G.GA.................T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  R  S  L  Y  L  Q  V  N  S  L  R  T  E  D  T  G  I  Y  Y  C  A  R  I  K  T  P  E  G  A  
                    Query_12563  181  AGAGGTCTCTGTATCTCCAAGTGAACAGCCTGAGAACCGAGGACACCGGCATATATTATTGTGCGAGGATAAAGACCCCGGAGGGCGCCT  270
V  88.7% (219/247)  IGHV3-21*04  227  ...AC..A........G...A..............G..........G.C.G.G.....C........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  22   ----------------------------------------------------------------------------------------..  23

                                      IMGT--------------------->                              
                                      Y  F  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_12563  271  ATTTCTCGTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  326
D  100.0% (5/5)     IGHD2-21*01  24   ...-----------------------------------------------------  26
J  100.0% (48/48)   IGHJ6*02     12   --------................................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_340607

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           311     4e-87
IGHD3-10*01                                                                                           18.0    0.58 
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	TTCTCTGGGCCATTTT	TATGGTTCG	AGTA	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTCTCTGGGCCATTTTTATGGTTCGAGTACTTTTGATATG	ARGSLGHFYGSSTFDM	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  G  A  S  F  S  D  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12564  1    ACCCTGTCCCTCACCTGCACTGTCTATGGTGCGTCCTTCAGTGATTACTTCTGGAACTGGATCCGCCAGCCCCCGGGGAAGGGGCTGGAG  90
V  90.6% (222/245)  IGHV4-34*01  49   ..................G............G...........G.....A.....G..................A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  G  T  N  Y  N  P  S  L  M  S  R  V  P  I  S  I  D  T  S  K  N 
                    Query_12564  91   TGGATTGGGGAGATCAATCATAGTGGAGGTACCAACTACAACCCGTCCCTGATGAGTCGAGTCCCCATATCAATTGACACGTCTAAGAAC  180
V  90.6% (222/245)  IGHV4-34*01  139  ...........A...............A.C....................C.A..........A........G.A........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  L  S  V  K  L  K  P  V  A  A  A  D  T  A  V  Y  Y  C  A  R  G  S  L  G  H  F  Y  G  S 
                    Query_12564  181  CAGTTATCCGTGAAGTTGAAGCCTGTGGCCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAGGTTCTCTGGGCCATTTTTATGGTTCG  270
V  90.6% (222/245)  IGHV4-34*01  229  .....C...C.....C...GCT.....A...................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (9/9)     IGHD3-10*01  8    ---------------------------------------------------------------------------------.........  16

                                      -------------->                                  
                                       S  T  F  D  M  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_12564  271  AGTACTTTTGATATGTGGGGCCAAGGGACACTGGTCTCCGTCTCTTCAG  319
J  93.3% (42/45)    IGHJ3*02     6    ----..........C...............A.....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_20008

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           357     1e-100
IGHD3-16*01                                                                                           10.3    114   
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	A	TTGGG	TCTGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGGGTCTGCGTTTGACCAC	ARIGSAFDH	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12565  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTAG  90
V  96.0% (238/248)  IGHV3-48*03  47   ........................................C...............................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  S  G  S  T  R  Y  T  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12565  91   AGTGGGTTTCATACATTAGTACCAGTGGTTCTACCAGATACACCGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (238/248)  IGHV3-48*03  137  .....................GT......AG.....T....TA...............................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  I  G  S  A  F  D  H  
                    Query_12565  181  AGAACTCACTGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAATTGGGTCTGCGTTTGACCACT  270
V  96.0% (238/248)  IGHV3-48*03  227  ...................A................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-16*01  16   ---------------------------------------------------------------------.....----------------  20
J  95.3% (41/43)    IGHJ4*02     6    --------------------------------------------------------------------------------......T...  15

                                                                       
                                      W  G  Q  G  T  L  V  T  I  S  S  
                    Query_12565  271  GGGGCCAGGGAACCCTGGTCACCATCTCCTCAG  303
J  95.3% (41/43)    IGHJ4*02     16   .......................G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_20009

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           343     2e-96
IGHD2-21*01                                                                                           10.3    124  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTC	GTGAT	CGGTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCGTGATCGGTGACTACTTTGACCAA	ARHVVIGDYFDQ	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  D  A  S  I  S  S  S  R  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_12566  1    ACCCTGTCCCTCACCTGCACTGTCTCTGATGCCTCCATCAGCAGTAGTAGATACTATTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.6% (235/251)  IGHV4-39*01  49   ............................G..G..................T.....C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  H  I  G  S  T  F  Y  K  Q  S  L  K  T  R  V  T  I  S  I  D  S  S 
                    Query_12566  91   CTGGAGTGGATTGGGAGTATTTATCATATTGGGAGCACCTTCTACAAACAGTCCCTCAAGACTCGAGTCACCATATCCATAGACTCGTCC  180
V  93.6% (235/251)  IGHV4-39*01  139  ....................C...T...G...........A......C.C...........G................G.....A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  H  V  V  I  G  D  Y 
                    Query_12566  181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTATATATTACTGTGCGAGACATGTCGTGATCGGTGACTAC  270
V  93.6% (235/251)  IGHV4-39*01  229  ...................A...............................G.G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD2-21*01  15   ---------------------------------------------------------------------------.....----------  19
J  95.8% (46/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12566  271  TTTGACCAATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  95.8% (46/48)    IGHJ4*02     6    ......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_108099

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           329     3e-92
IGHD3-10*01                                                                                           21.8    0.041
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGGTTCGAGCAGTTATT	CCTTCGCGCG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGTTCGAGCAGTTATTCCTTCGCGCGCTACGGTATGGACGTC	ARDGSSSYSFARYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  S  F  S  T  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12567  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCTCTTTCAGTACTTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-48*03  47   ....................G..............A.C.......G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  G  G  G  R  T  I  Y  Y  A  D  P  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12567  91   AGTGGGTTTCATACATTAGTGGCGGTGGACGTACCATTTACTACGCAGACCCCGTGAAGGGCCGATTCACCATATCCAGAGACAACGCCA  180
V  92.0% (230/250)  IGHV3-48*03  137  ....................A.TA....TA.......A............T.T....................C................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  T  A  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  S  S  S  Y  S  
                    Query_12567  181  AGACCGCTCTGCATCTACAAATGAACAGCCTGAGAGCCGAAGACACGGCTGTTTATTACTGTGCGAGAGATGGTTCGAGCAGTTATTCCT  270
V  92.0% (230/250)  IGHV3-48*03  227  ...A.T.A...T....G.......................G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.2% (15/17)    IGHD3-10*01  10   ----------------------------------------------------------------------.......G.G.......---  26

                                      GT-------------------->                                 
                                      F  A  R  Y  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_12567  271  TCGCGCGCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  326
J  98.0% (48/49)    IGHJ6*02     14   -------......................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_108098

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           371     7e-105
IGHD2-21*02                                                                                           18.0    0.66  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACTG	GGTGGGGACTACTAT	GGTCCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTC	VRRLGGDYYGPFEF	291	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	67	4	0	94.4
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	105	9	0	92.1
CDR3-IMGT (germline)	291	297	7	6	1	0	85.7
Total	N/A	N/A	291	264	27	0	90.7


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  E  I  S  C  K  A  Y  G  Y  A  F  N  D  
                    Query_12568  7    TGCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCCGGGGAGTCTCTGGAGATCTCCTGTAAGGCTTATGGATACGCCTTTAACGACT  96
V  90.7% (264/291)  IGHV5-51*01  5    .........................G........................A...............G..C.......AG.....C.AG..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  K  P  E  K  G  L  D  W  M  G  V  I  Y  P  D  D  L  D  T  T  Y  S  
                    Query_12568  97   ACTGGATCGGCTGGGTGCGCCAGAAGCCCGAGAAAGGCCTGGATTGGATGGGGGTCATCTATCCTGATGACCTTGATACGACATACAGTC  186
V  90.7% (264/291)  IGHV5-51*01  95   ........................T.....G............G.........A............G....TC......C.G......C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  N  T  I  Y  L  R  W  S  S  L  K  A  S  D  T  
                    Query_12568  187  CGTCCTTCCAAGGCCAGGTCACAATCTCAGTCGACAAGTCCATCAACACCATCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACACCG  276
V  90.7% (264/291)  IGHV5-51*01  185  ......................C.......C..............G....GC........A.............................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><----------------CDR3-IMGT--------------->                                  
                                      A  M  Y  Y  C  V  R  R  L  G  G  D  Y  Y  G  P  F  E  F  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_12568  277  CCATGTATTATTGTGTGAGACGACTGGGTGGGGACTACTATGGTCCATTTGAGTTCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  366
V  90.7% (264/291)  IGHV5-51*01  275  ..........C....C.....---------------------------------------------------------------------  295
                                      A  M  Y  Y  C  A  R                                                                       
D  86.7% (13/15)    IGHD2-21*02  11   --------------------------.....T....G....-------------------------------------------------  25
J  93.0% (40/43)    IGHJ4*02     6    -----------------------------------------------.....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_108097

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           257     1e-70
IGHD3-16*01                                                                                           12.2    30   
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TATTG	CACAGGGGCTTCAG	GTTATG	GA	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGGGCTTCAGGTTATGGATGGCTCGACCCC	TGASGYGWLDP	237	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	20	23	4	4	0	0	100
CDR1-IMGT	24	47	24	17	7	0	70.8
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	235	113	99	14	0	87.6
Total	N/A	N/A	216	190	26	0	88


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  L  T  M  S  D  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_12569  20   GTCTGGACTCACAATGAGTGACTACGGCATGCATTGGGTCCGCCAGGCTCCAGGCAAGGGACTGGAATGGGTGGCAGTTATATGGTATGA  109
V  88.0% (190/216)  IGHV3-33*03  72   .......T....CT.C...AG...T........C..........................G.....G.......................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  I  K  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  F  L  Q  M  D
                    Query_12569  110  TGGAATTAAAAAATTCTATGCAGATTCCGTGAAGGGCCGATTCACCATTTCTAGAGACGACTCCAAGAACACCCTATTTCTGCAAATGGA  199
V  88.0% (190/216)  IGHV3-33*03  162  .....G...T....A.........C.......................C..C......A.............G..G.A..........A.  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------CDR3-IMGT----------->                    
                                        S  L  R  A  D  D  T  A  L  Y  Y  C  T  G  A  S  G  Y  G  W  L  D  P  W  G  Q  G  A  L  V
                    Query_12569  200  CAGTCTGAGAGCCGACGACACGGCTCTATATTATTGCACAGGGGCTTCAGGTTATGGATGGCTCGACCCCTGGGGCCAGGGAGCCCTGGT  289
V  88.0% (190/216)  IGHV3-33*03  252  ...C...........G.........G.G.....C..------------------------------------------------------  287
                                        S  L  R  A  E  D  T  A  V  Y  Y                                                         
D  100.0% (6/6)     IGHD3-16*01  24   --------------------------------------------------......----------------------------------  29
J  95.7% (44/46)    IGHJ5*02     6    ----------------------------------------------------------...T....................A.......  37

                                                    
                                        T  V  S  S  
                    Query_12569  290  CACCGTCTCCTCAG  303
J  95.7% (44/46)    IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_327517

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           361     4e-102
IGHD1-7*01                                                                                            16.1    2.2   
IGHJ2*01                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-7*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TCTCAGGGAGTCGG	GGAACTAC	GGAG	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTCTCAGGGAGTCGGGGAACTACGGAGTGGTACTTCGATCTC	ARVSGSRGTTEWYFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12570  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACTTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-74*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  M  K  S  D  G  S  S  T  S  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  A  
                    Query_12570  91   TGTGGGTCTCACGTATGAAAAGCGATGGAAGTAGCACAAGCTACGCGGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (240/249)  IGHV3-74*01  137  ................T..T..T.....G...........................A.................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  S  G  S  R  G  T  
                    Query_12570  181  GGAACACGTTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGTCTCAGGGAGTCGGGGAACTA  270
V  96.4% (240/249)  IGHV3-74*01  227  A.......C............................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-7*01   10   -----------------------------------------------------------------------------------.......  16

                                      T------------------>                                  
                                      T  E  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_12570  271  CGGAGTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  100.0% (8/8)     IGHD1-7*01   17   .-----------------------------------------------------  17
J  100.0% (49/49)   IGHJ2*01     5    -----.................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_20002

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         386     1e-109
IGHD6-25*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CACGACCAAGGCGATGCAA	CAGCGG	G	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACGACCAAGGCGATGCAACAGCGGGTGACTAC	ARHDQGDATAGDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  R  I  S  C  Q  G  S  G  Y  S  F  A  M  H
                    Query_12571    1    GCAGCTAGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTCAGGGTTCTGGATACAGCTTTGCCATGCA  90
V  92.7% (268/289)  IGHV5-10-1*01  6    ......G......................A...............................A....................A...GCT.  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  R  D  S  Y  T  T  Y  S  P
                    Query_12571    91   CTGGATCACCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGCGGATTGATCCTCGTGACTCTTATACGACCTACAGCCC  180
V  92.7% (268/289)  IGHV5-10-1*01  96   ........G.............A.............................A...........A.............C.A.........  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  R  V  T  I  S  V  D  K  S  I  T  T  A  H  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12571    181  GTCCTTCCAAGGCCGCGTCACCATCTCAGTTGACAAGTCCATCACCACTGCCCATCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  92.7% (268/289)  IGHV5-10-1*01  186  ..............A..............C..............G.......T.C...........C.......................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          V  Y  Y  C  A  R  H  D  Q  G  D  A  T  A  G  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12571    271  CGTGTACTACTGTGCGAGACACGACCAAGGCGATGCAACAGCGGGTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  92.7% (268/289)  IGHV5-10-1*01  276  .A....T............-------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD6-25*01    9    --------------------------------------......------------------------------------------  14
J  100.0% (41/41)   IGHJ4*02       8    ---------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_20003

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           315     5e-88
IGHD3-16*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACGGCACATTGATG	GTTATCG	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACGGCACATTGATGGTTATCGTGATGCTTTCGAAATC	ARTRHIDGYRDAFEI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	225	24	0	90.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  D  Y  H  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_12572  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCGTCAGTAGTGATTATCACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  90.4% (225/249)  IGHV4-61*01  49   .......................C.................C....G.AG.T..........C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  G  W  I  G  H  I  Y  Y  T  R  S  V  T  Y  N  P  S  L  K  S  R  M  S  M  S  V  D  A  S 
                    Query_12572  91   CTGGGGTGGATTGGACATATCTATTACACTAGGAGTGTCACCTACAACCCCTCCCTCAAGAGTCGAATGTCCATGTCAGTAGACGCGTCC  180
V  90.4% (225/249)  IGHV4-61*01  139  ....A.........GT............G.G....CAC..A.........................G.CA....A.........A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  R  H  I  D  G  Y 
                    Query_12572  181  AAAAACCAGTTCTCCCTGACGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAACACGGCACATTGATGGTTAT  270
V  90.4% (225/249)  IGHV4-61*01  229  ..G................A.................................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-16*02  24   -------------------------------------------------------------------------------------.....  28

                                      ----------------->                                  
                                       R  D  A  F  E  I  W  G  Q  G  T  M  V  S  V  S  T  
                    Query_12572  271  CGTGATGCTTTCGAAATCTGGGGCCAAGGGACAATGGTCAGCGTCTCTACAG  322
D  100.0% (7/7)     IGHD3-16*02  29   ..--------------------------------------------------  30
J  92.0% (46/50)    IGHJ3*02     1    --.........T..T.........................C.......T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_20004

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           341     6e-96
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GACAAAGTGGCCGCTT	ATAGTAGTGGTTATTACT	CCCTGACTTTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAAAGTGGCCGCTTATAGTAGTGGTTATTACTCCCTGACTTTTTTTGACTAC	ARDKVAAYSSGYYSLTFFDY	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	19	2	0	90.5
FR3-IMGT	153	266	114	109	5	0	95.6
CDR3-IMGT (germline)	267	272	6	6	0	0	100
Total	N/A	N/A	272	247	19	6	90.8


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  S  D  S  G  Y  Y  W  N  W  
                    Query_12573  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCAGTGACAGTGGTTATTACTGGAACTGGT  90
V  90.8% (247/272)  IGHV4-34*12  26   ........T.......T............T................C..T................------....C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  H  R  G  G  T  N  Y  N  P  S  L  Q  S  R  
                    Query_12573  91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCATCGTGGAGGCACCAACTACAACCCGTCCCTCCAGAGTCGAG  180
V  90.8% (247/272)  IGHV4-34*12  110  T.........C...........G.....G.....................A.....A.......................A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  K  S  K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  
                    Query_12573  181  TCACCATATCAGTAGACAAGTCCAAGAACCATTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGCGA  270
V  90.8% (247/272)  IGHV4-34*12  200  ..................C............G.........................................T........C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                  
                                      R  D  K  V  A  A  Y  S  S  G  Y  Y  S  L  T  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12573  271  GAGACAAAGTGGCCGCTTATAGTAGTGGTTATTACTCCCTGACTTTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  90.8% (247/272)  IGHV4-34*12  290  ..----------------------------------------------------------------------------------------  291
                                      R                                                                                         
D  100.0% (18/18)   IGHD3-22*01  12   ------------------..................------------------------------------------------------  29
J  100.0% (43/43)   IGHJ4*02     6    -----------------------------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_20005

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           434     4e-124
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ACCCTCGG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTCGGTGCTCTTGATATC	ARTLGALDI	291	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	24	0	0	100
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	110	4	0	96.5
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	294	286	8	0	97.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_12574  3    CAGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  92
V  97.3% (286/294)  IGHV1-18*01  1    .....T........G...........................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  H  Y 
                    Query_12574  93   AGCTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACACATTAT  182
V  97.3% (286/294)  IGHV1-18*01  91   .........................................G.........................C................A.C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_12574  183  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  272
V  97.3% (286/294)  IGHV1-18*01  181  .........C................................................................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><--------CDR3-IMGT-------->                                  
                                       T  A  V  Y  Y  C  A  R  T  L  G  A  L  D  I  W  G  Q  G  A  M  V  T  V  S  S  
                    Query_12574  273  ACAGCCGTGTATTACTGTGCGAGAACCCTCGGTGCTCTTGATATCTGGGGCCAAGGGGCAATGGTCACCGTCTCTTCAG  351
V  97.3% (286/294)  IGHV1-18*01  271  ..G.....................-------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                        
J  95.7% (45/47)    IGHJ3*02     4    --------------------------------....T....................A.....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_108091

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           406     1e-115
IGHD4-17*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGGA	CCCGAGC	CGGTGACTAC	GAGAGACAAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGACCCGAGCCGGTGACTACGAGAGACAAATTGACTCC	ARTRAGDYERQIDS	267	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	50	45	42	3	0	93.3
CDR1-IMGT	51	80	30	30	0	0	100
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	152	21	21	0	0	100
FR3-IMGT	153	266	114	113	1	0	99.1
CDR3-IMGT (germline)	267	273	7	7	0	0	100
Total	N/A	N/A	268	264	4	0	98.5


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  S  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R 
                    Query_12575  6    CTGGTGAAGCCCTCGCAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAATGTGTGTGAGCTGGATCCGT  95
V  98.5% (264/268)  IGHV2-70*01  31   ........A...A.A...........................................................................  120
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R 

                                      ------FR2-IMGT---------------------><-----CDR2-IMGT-----><--------------------------------
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T 
                    Query_12575  96   CAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACTCATTGATTGGGATGATGATAAATACTACAGCACATCTCTGAAGACCAGGCTCACC  185
V  98.5% (264/268)  IGHV2-70*01  121  ..........................................................................................  210
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T 

                                      --------------------FR3-IMGT----------------------------------------------------><--------
                                       I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  G  T  Y  Y  C  A  R  T 
                    Query_12575  186  ATCTCCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGGCACGTATTACTGTGCACGGACC  275
V  98.5% (264/268)  IGHV2-70*01  211  ...................................................................C....................--  298
                                       I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R    

                                      --------CDR3-IMGT--------------->                                  
                                       R  A  G  D  Y  E  R  Q  I  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12575  276  CGAGCCGGTGACTACGAGAGACAAATTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
D  100.0% (10/10)   IGHD4-17*01  7    -----..........----------------------------------------------------  16
J  97.6% (41/42)    IGHJ4*02     7    -------------------------......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_20007

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_12576  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_12576  91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y 
                    Query_12576  181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTAC  270
V  91.4% (223/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD2-2*01   8    ---------------------------------------------------------------------........T........----  24
J  88.5% (46/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_12576  271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  318
J  88.5% (46/52)    IGHJ6*02     15   ...GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_219908

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           282     4e-78
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	217	27	6	86.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_12577  4    CCCTGAGACTCTCCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.8% (217/250)  IGHV4-34*01  50   .....TCC...A..........C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_12577  94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.8% (217/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_12577  184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.8% (217/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_12577  274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_327514

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           394     7e-112
IGHD5-12*01                                                                                           14.1    9.3   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGAACGTAGAAT	TGGCTAC	AATCCTAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGAACGTAGAATTGGCTACAATCCTAATTGACTAC	ARANVELATILIDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  Y
                    Query_12578  1    GCAGCTGGTGCAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTAAGACTCTCCTGTGCAGCCTCCGGATTCACCTTCAGTTACTA  90
V  93.4% (271/290)  IGHV3-30*03  6    ..........G.....................................G....................T...............AG...  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  M  V  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  S  Y  D  G  T  K  I  F  Y  A  D
                    Query_12578  91   TGGCATGGTCTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCACTTATATCATATGATGGAACCAAAATATTCTATGCAGA  180
V  93.4% (271/290)  IGHV3-30*03  96   .......CA...........................................G..................GT..T.A..A.........  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  E  M  N  S  L  R  I  E  D  T  A
                    Query_12578  181  CTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCAAGAACACGCTGTATCTGGAAATGAACAGCCTGAGAATTGAGGACACGGC  270
V  93.4% (271/290)  IGHV3-30*03  186  ....................................T.....................C.................GC............  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  H  Y  C  A  R  A  N  V  E  L  A  T  I  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12578  271  TGTTCATTACTGTGCGAGAGCGAACGTAGAATTGGCTACAATCCTAATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.4% (271/290)  IGHV3-30*03  276  ...GT...............---------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD5-12*01  11   --------------------------------.......--------------------------------------------------  17
J  100.0% (42/42)   IGHJ4*02     7    -----------------------------------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_139563

Length=410
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           383     1e-108
IGHD3-10*01                                                                                           23.8    0.013 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTCCGTCGGGGCGTGGA	TATGACTATGGTTCG	TTAGGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTCCGTCGGGGCGTGGATATGACTATGGTTCGTTAGGGTACTACTTCTTCGGCATGGACGTC	ARSPSGRGYDYGSLGYYFFGMDV	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	267	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  T  P  G  S  S  V  K  V  S  C  K  A  P  G  G  T  F  K  N  Y
                    Query_12579  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGACGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTCCTGGAGGCACCTTCAAAAATTA  90
V  92.4% (267/289)  IGHV1-69*01  6    ..................G.............A..................................T...............GC.GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  S  I  L  I  F  G  T  P  N  Y  A  Q
                    Query_12579  91   TGCTATCAGCTGGGTGCGTCAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGAAGCATCCTTATCTTTGGCACACCAAACTACGCACA  180
V  92.4% (267/289)  IGHV1-69*01  96   ..................A...................................G.T.....C.........T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  A  I  T  A  D  E  S  T  S  T  V  Y  M  E  L  R  S  L  R  F  E  D  T  A
                    Query_12579  181  GAAATTCCAGGGCAGAGTCGCGATTACCGCGGACGAATCCACCAGTACAGTCTACATGGAGCTGCGCAGCCTAAGATTTGAGGACACGGC  270
V  92.4% (267/289)  IGHV1-69*01  186  ...G...............A......................G..C....C.............A.......G....C............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        V  Y  Y  C  A  R  S  P  S  G  R  G  Y  D  Y  G  S  L  G  Y  Y  F  F  G  M  D  V  W  G  Q
                    Query_12579  271  CGTCTATTACTGTGCGAGATCTCCGTCGGGGCGTGGATATGACTATGGTTCGTTAGGGTACTACTTCTTCGGCATGGACGTCTGGGGCCA  360
V  92.4% (267/289)  IGHV1-69*01  276  ...G...............-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  93.3% (14/15)    IGHD3-10*01  2    -------------------------------------...T...........--------------------------------------  16
J  93.0% (53/57)    IGHJ6*02     6    ----------------------------------------------------------.......A..A...T.................  37

                                                               
                                        G  T  T  V  T  V  S  S 
                    Query_12579  361  AGGAACCACGGTCACCGTCTCCTCA  385
J  93.0% (53/57)    IGHJ6*02     38   ...G.....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40183344


Query= Query_159085

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           296     2e-82
IGHD1-1*01                                                                                            12.2    31   
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTT	TACAAC	GGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTTACAACGGGACTACTTTGACTAC	ARVLQRDYFDY	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	30	26	21	5	0	80.8
CDR1-IMGT	31	54	24	21	3	0	87.5
FR2-IMGT	55	105	51	46	5	0	90.2
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	102	12	0	89.5
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	243	216	27	0	88.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  M  N  S  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_12580  5    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATGAATAGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAGT  94
V  88.9% (216/243)  IGHV4-59*01  50   .....TCC...A....C....................C.G........A...............G.........................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      Y  I  G  F  I  Y  Y  T  G  S  A  Y  Y  S  S  S  L  K  S  R  V  T  I  L  I  D  T  S  K  K  
                    Query_12580  95   ACATTGGATTTATCTATTACACTGGGAGCGCCTACTACAGTTCCTCCCTCAAGAGTCGAGTCACCATATTAATAGACACGTCCAAAAAGG  184
V  88.9% (216/243)  IGHV4-59*01  140  GG.....G.A...........G.......A..A......ACC...........................C.G.............G..CC  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      E  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  L  Q  R  D  Y  F  D  Y  
                    Query_12580  185  AATTCTCCCTGAAACTGAGCTCAGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTTTTACAACGGGACTACTTTGACTACT  274
V  88.9% (216/243)  IGHV4-59*01  230  .G...........G........T........................................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD1-1*01   3    ------------------------------------------------------------------......------------------  8
J  100.0% (48/48)   IGHJ4*02     1    ---------------------------------------------------------------------------...............  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12580  275  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (48/48)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_224223

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           291     6e-81
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	213	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_12581  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  88.8% (213/240)  IGHV4-59*01  49   ..................A......................T.GT.A...C....G.............C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R 
                    Query_12581  91   TGGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGA  180
V  88.8% (213/240)  IGHV4-59*01  139  .......GG.....C.ATT................C..C...........C.....................G.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G 
                    Query_12581  181  CACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGT  270
V  88.8% (213/240)  IGHV4-59*01  229  ..G...........G....G............T..............G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-22*01  7    -----------------------------------------------------------------------------..........A..  19

                                      ----------------------->                                  
                                       G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12581  271  GGCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  328
D  93.3% (14/15)    IGHD3-22*01  20   ..--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    --------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_300408

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           277     1e-76
IGHD2-15*01                                                                                           21.8    0.044
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATAGGC	AGTGGTGGTGGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCTTGGGTCCGGTGTCCCCTGTACTCCCTTCCGCATAGGCAGTGGTGGTGGCTGCTACTTTGACAAC	ARRLGSGVPCTPFRIGSGGGCYFDN	244	318	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	213	36	0	85.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  P  G  D  S  I  S  S  D  S  F  Y  W  A  W  I  R  Q  S  P  V  K  G 
                    Query_12582  1    ACCCTGTCCCTCACCTGCACTGTTCCCGGTGATTCCATCAGCAGTGACAGTTTCTACTGGGCCTGGATCCGCCAGTCCCCAGTGAAGGGA  90
V  85.5% (213/249)  IGHV4-39*02  49   .......................CT.T....GC............AGT....A........G.............C......G......G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  M  F  N  G  G  R  T  Y  S  N  P  S  L  K  N  R  V  T  I  S  A  D  T  S 
                    Query_12582  91   CTGGAGTGGATAGGGACTATGTTTAATGGTGGACGCACCTATTCCAACCCGTCCCTCAAGAATCGAGTCACCATATCTGCGGACACGTCC  180
V  85.5% (213/249)  IGHV4-39*02  139  ...........T....G...C.A.T..A....GA.......C.A.................G...............C.TA.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       R  N  H  F  S  L  R  L  T  Y  V  T  S  A  D  S  G  V  Y  Y  C  A  R  R  L  G  S  G  V  P 
                    Query_12582  181  AGGAACCACTTCTCCCTGAGGCTGACCTATGTGACCTCCGCAGACAGCGGTGTCTATTACTGTGCGAGACGTCTTGGGTCCGGTGTCCCC  270
V  85.5% (213/249)  IGHV4-39*02  229  .A.................A.....G..C.......G.........CG.C...G...............---------------------  297
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      ------CDR3-IMGT-------------------------------->                                 
                                       C  T  P  F  R  I  G  S  G  G  G  C  Y  F  D  N  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_12582  271  TGTACTCCCTTCCGCATAGGCAGTGGTGGTGGCTGCTACTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  351
D  92.9% (13/14)    IGHD2-15*01  11   ---------------------.........A....----------------------------------------------  24
J  97.8% (45/46)    IGHJ4*02     2    -----------------------------------..........T...................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_300409

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD3-10*01                                                                                           12.2    36    
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTCAAGT	TGGTTC	CGCAAATGG	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTCAAGTTGGTTCCGCAAATGGCTACCAGTACGGCATGGACGTC	ARFQVGSANGYQYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  P  H  Y
                    Query_12583  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTAAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTCCCCACTA  90
V  96.2% (278/289)  IGHV5-51*03  6    ................................................G.................................A..AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  P  E  W  M  G  I  I  Y  P  A  D  P  D  T  R  Y  S  P
                    Query_12583  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCCGGAGTGGATGGGGATCATCTATCCTGCTGACCCTGATACCAGATACAGCCC  180
V  96.2% (278/289)  IGHV5-51*03  96   ......................................T..........................G....T...................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  C  Q  V  T  I  S  A  G  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12583  181  GTCCTTCCAATGCCAGGTCACCATCTCAGCCGGCAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (278/289)  IGHV5-51*03  186  ..........G.....................A...........G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  W  A  R  F  Q  V  G  S  A  N  G  Y  Q  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_12583  271  CATGTATTACTGGGCGAGATTTCAAGTTGGTTCCGCAAATGGCTACCAGTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  96.2% (278/289)  IGHV5-51*03  276  ............T......-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-10*01  10   ---------------------------......---------------------------------------------------------  15
J  94.5% (52/55)    IGHJ6*02     8    ------------------------------------------....T.C.....T...................................  55

                                             
                                        S  S 
                    Query_12583  361  CTCCTCA  367
J  94.5% (52/55)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_300406

Length=317
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           304     9e-85
IGHD4-17*01                                                                                           16.1    2.0  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCG	ACGGTGAC	ACCGAGAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACGGTGACACCGAGAATGACTAT	AADGDTENDY	230	259	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	232	3	3	0	0	100
Total	N/A	N/A	220	207	13	0	94.1


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  L  T  F  S  S  F  G  M  H  W  V  R  Q  P  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_12584  13   GTCTGGACTCACCTTCAGTAGCTTTGGCATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTCATATGGTATGA  102
V  94.1% (207/220)  IGHV3-33*01  72   .......T...............A......................G...............................T...........  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  K  K  Y  Y  T  D  S  V  K  G  R  F  I  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_12584  103  TGGAAGTAAGAAATACTATACAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCAAGAACACGTTGTATCTGCAGATGAA  192
V  94.1% (207/220)  IGHV3-33*01  162  .........T.........G........................C............................C..........A.....  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------CDR3-IMGT--------->                       
                                        S  L  R  V  D  D  T  A  V  Y  F  C  A  A  D  G  D  T  E  N  D  Y  W  G  Q  G  T  L  V  T
                    Query_12584  193  CAGCCTGAGAGTCGACGACACGGCTGTCTATTTCTGTGCGGCCGACGGTGACACCGAGAATGACTATTGGGGCCAGGGAACCCTGGTCAC  282
V  94.1% (207/220)  IGHV3-33*01  252  ...........C...G...........G....A.......--------------------------------------------------  291
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                   
D  100.0% (8/8)     IGHD4-17*01  6    --------------------------------------------........--------------------------------------  13
J  97.6% (40/41)    IGHJ4*02     8    ------------------------------------------------------------......C.......................  37

                                                 
                                        V  S  S  
                    Query_12584  283  CGTCTCCTCAG  293
J  97.6% (40/41)    IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30621390


Query= Query_300407

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           360     1e-101
IGHD6-13*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTT	TATAACAGCAGTTGG	GTACTCGA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTTATAACAGCAGTTGGGTACTCGATGACTTC	ARDFYNSSWVLDDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  I  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12585  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAATCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-21*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  T  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12585  91   AGTGGGTCTCATCCATTAGTAGTAGTACTAGTTACATATATTATGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-21*01  137  ...........................G............C..C..............................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  R  S  L  Y  L  H  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  Y  N  S  S  W  
                    Query_12585  181  AGAGATCACTGTATCTGCACATGAACAACCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGATTTTTATAACAGCAGTTGGG  270
V  96.0% (240/250)  IGHV3-21*01  227  ...AC..............A.......G........................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD6-13*01  4    --------------------------------------------------------------------------....G......C...-  18

                                      ------------->                                
                                      V  L  D  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12585  271  TACTCGATGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  316
J  97.4% (38/39)    IGHJ4*02     8    -------.....A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_300404

Length=407
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           425     3e-121
IGHD7-27*01                                                                                           14.1    10.0  
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTCTCTACAGAACCGTCCTATGGGACA	CTAACTG	TGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCC	ARDPFSTEPSYGTLTVRFDP	289	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	74	1	0	98.7
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	284	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_12586  1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  90
V  95.9% (284/296)  IGHV1-18*01  1    .....T....................................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  P  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  D  T  N  Y 
                    Query_12586  91   AACTATCCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTGACACAAATTAT  180
V  95.9% (284/296)  IGHV1-18*01  91   .G....GG..........................................................G...........A.......C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  D  L  R  S  L  T  S  D  D 
                    Query_12586  181  GCACAGAAGTTCCAGGGCAGAGTCACCTTGACCACAGACACGTCCACGAGCACAGCCTACATGGACCTGAGGAGCCTGACATCTGACGAC  270
V  95.9% (284/296)  IGHV1-18*01  181  .........C.................A.............A.......................G.............G..........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  V  Y  Y  C  A  R  D  P  F  S  T  E  P  S  Y  G  T  L  T  V  R  F  D  P  W  G  Q  G 
                    Query_12586  271  ACGGCCGTGTATTACTGTGCGAGAGATCCTTTCTCTACAGAACCGTCCTATGGGACACTAACTGTGAGGTTCGACCCCTGGGGCCAGGGA  360
V  95.9% (284/296)  IGHV1-18*01  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD7-27*01  1    ---------------------------------------------------------.......--------------------------  7
J  97.8% (44/45)    IGHJ5*02     7    -------------------------------------------------------------------.......................  29

                                                            
                                       T  L  V  T  V  S  T  
                    Query_12586  361  ACCCTGGTCACCGTCTCCACAG  382
J  97.8% (44/45)    IGHJ5*02     30   ..................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39867768


Query= Query_300402

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           419     2e-119
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	71	4	0	94.7
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	109	5	0	95.6
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	282	14	0	95.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T 
                    Query_12587  4    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACC  93
V  95.3% (282/296)  IGHV5-51*01  1    .....G........G...................A...................................G...................  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y 
                    Query_12587  94   AACTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATAC  183
V  95.3% (282/296)  IGHV5-51*01  91   .G...........G...........................C....................C...................C.......  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D 
                    Query_12587  184  AGCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGAC  273
V  95.3% (282/296)  IGHV5-51*01  181  ............C.....................................C...........G......A....................  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T 
                    Query_12587  274  ACCGCCATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACC  363
V  95.3% (282/296)  IGHV5-51*01  271  ........G.................----------------------------------------------------------------  296
                                       T  A  M  Y  Y  C  A  R                                                                   
D  92.9% (13/14)    IGHD1-26*01  4    ----------------------------------..........C...------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ---------------------------------------------------.......A...............................  44

                                                        
                                       T  V  T  V  S  S 
                    Query_12587  364  ACGGTCACCGTCTCCTCA  381
J  98.2% (56/57)    IGHJ6*02     45   ..................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_300403

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           438     5e-125
IGHD3-10*01                                                                                           18.0    0.66  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGCCC	GTTCGGGGA	CTTTCCCAAAAAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGCCCGTTCGGGGACTTTCCCAAAAAAACTTTGACTAC	ARDLPVRGLSQKNFDY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	285	5	0	98.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  K  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_12588  2    CAGCTGGTGCAGTCTGGAGCTAAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTAT  91
V  98.3% (285/290)  IGHV1-18*01  7    .....................G....................................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_12588  92   GGTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAG  181
V  98.3% (285/290)  IGHV1-18*01  97   ...A......................................................................................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  A  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_12588  182  AAACTCCAGGGCAGAGTCACCATGACCACAGACACTTCCGCGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  98.3% (285/290)  IGHV1-18*01  187  ..G................................A...A..................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  D  L  P  V  R  G  L  S  Q  K  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_12588  272  GTGTATTACTGTGCGAGAGATCTGCCCGTTCGGGGACTTTCCCAAAAAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  361
V  98.3% (285/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD3-10*01  12   ---------------------------.........------------------------------------------------------  20
J  100.0% (45/45)   IGHJ4*02     4    -------------------------------------------------.........................................  44

                                          
                                       S  
                    Query_12588  362  TCAG  365
J  100.0% (45/45)   IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_300400

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           360     1e-101
IGHD6-13*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTT	TATAACAGCAGTTGG	GTACTCGA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTTATAACAGCAGTTGGGTACTCGATGACTTC	ARDFYNSSWVLDDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  I  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12589  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAATCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-21*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  T  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12589  91   AGTGGGTCTCATCCATTAGTAGTAGTACTAGTTACATATATTATGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-21*01  137  ...........................G............C..C..............................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  R  S  L  Y  L  H  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  Y  N  S  S  W  
                    Query_12589  181  AGAGATCACTGTATCTGCACATGAACAACCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGATTTTTATAACAGCAGTTGGG  270
V  96.0% (240/250)  IGHV3-21*01  227  ...AC..............A.......G........................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD6-13*01  4    --------------------------------------------------------------------------....G......C...-  18

                                      ------------->                                
                                      V  L  D  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12589  271  TACTCGATGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  316
J  97.4% (38/39)    IGHJ4*02     8    -------.....A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_300401

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           333     1e-93
IGHD3-22*01                                                                                           14.1    8.3  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGACA	GGGGGC	GGTTATGACT	T	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACAGGGGGCGGTTATGACTTACAACTGGTTCGACCCC	ARQGAVMTYNWFDP	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	232	19	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  S  L  Y  Y  W  A  W  I  R  Q  P  P  G  R  G 
                    Query_12590  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTAGTCTTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAGGGGG  90
V  92.4% (232/251)  IGHV4-39*01  49   ...................C............................AG...........G.......................A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  F  S  G  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  L  S  V  D  T  P 
                    Query_12590  91   CTGGAGTGGATTGGCACAATCTTTTCTGGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCCTATCCGTGGACACGCCC  180
V  92.4% (232/251)  IGHV4-39*01  139  ..............G.GT....A..A.A......G.....................................A.......A......T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  S  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  G  A  V  M  T  Y 
                    Query_12590  181  AAGAGCCAGTTCTCCCTGAAACTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGCGACAGGGGGCGGTTATGACTTAC  270
V  92.4% (232/251)  IGHV4-39*01  229  ....A...............G......................................C......A....-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-22*01  20   -----------------------------------------------------------------------------......T...---  29
J  100.0% (51/51)   IGHJ5*02     1    ----------------------------------------------------------------------------------------..  2

                                      -------------->                                  
                                       N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12590  271  AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (51/51)   IGHJ5*02     3    .................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_224220

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           346     2e-97
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCCAA	GTATAGAAGTGGC	ACCTACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCCAAGTATAGAAGTGGCACCTACTTTTGACTAT	AREPSIEVAPTFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	236	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  T  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  R  R 
                    Query_12591  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTACTGGTGGCTACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAGGAGA  90
V  94.0% (236/251)  IGHV4-61*08  49   .........................................C.G......T...........C.................A....A.G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 
                    Query_12591  91   CTGGAGTGGATTGGCTATATCTATTACACTGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACAAGTCG  180
V  94.0% (236/251)  IGHV4-61*08  139  ..............G.............G......C............................................A....C...C  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  P  S  I  E  V  A 
                    Query_12591  181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGAGCCAAGTATAGAAGTGGCA  270
V  94.0% (236/251)  IGHV4-61*08  229  ...................A.......................................C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD6-19*01  3    ----------------------------------------------------------------------------......C......-  15

                                      -------------->                                  
                                       P  T  F  D  Y  W  G  Q  G  T  L  G  T  V  S  S  
                    Query_12591  271  CCTACTTTTGACTATTGGGGCCAGGGAACCCTGGGCACCGTCTCCTCAG  319
J  95.3% (41/43)    IGHJ4*02     6    ------........C...................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_51156

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD3-3*01                                                                                            23.8    0.011
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCAATCGAGGC	TTTTGGAGTGGT	CGGGGGCCCCTTATCCC	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCAATCGAGGCTTTTGGAGTGGTCGGGGGCCCCTTATCCCTACTTCGATCTC	AREQSRLLEWSGAPYPYFDL	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  A  P  G  K  G  L  E 
                    Query_12592  1    ACCCTGTCCCTCACCTGCACTGTCTCGGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATTCGGCAGGCCCCAGGGAAGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   ..........................T...................................C......C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  F  Y  S  R  G  R  T  N  Y  N  P  A  L  T  T  R  V  T  I  S  A  D  S  S  K  N 
                    Query_12592  91   TGGATTGGATATTTCTATAGCAGAGGCAGGACGAACTACAACCCCGCCCTCACGACTCGAGTCACCATATCAGCAGACTCGTCCAAGAAC  180
V  92.2% (226/245)  IGHV4-59*01  139  ........G...A.....TA...T..G..C..C............T......A..G.................T....A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  Q  S  R  L  L  E  W  S 
                    Query_12592  181  CAGTTCTCCCTGAAGCTCAGCTCTGTTACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGAGCAATCGAGGCTTTTGGAGTGGTCG  270
V  92.2% (226/245)  IGHV4-59*01  229  .................G........G....................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD3-3*01   11   ----------------------------------------------------------------------------............--  22

                                      GT------------------------>                                  
                                       G  A  P  Y  P  Y  F  D  L  W  G  R  G  T  Q  V  T  V  S  S  
                    Query_12592  271  GGGGCCCCTTATCCCTACTTCGATCTCTGGGGCCGTGGCACCCAGGTCACTGTCTCCTCAG  331
J  97.8% (45/46)    IGHJ2*01     8    ---------------............................T.................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_308231

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           304     9e-85
IGHD6-25*01                                                                                           12.2    30   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-25*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGGG	GCATCGGCT	GAGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGGGCATCGGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	20	4	0	83.3
FR2-IMGT	51	101	51	50	1	0	98
CDR2-IMGT	102	125	24	22	2	0	91.7
FR3-IMGT	126	239	114	106	8	0	93
Total	N/A	N/A	224	209	15	0	93.3


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  T  P  G  K  G  L  E  W  V  A  V  I  
                    Query_12593  16   GTGCAGCGTCTGGATTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGACTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATAT  105
V  93.3% (209/224)  IGHV3-33*03  65   ...................C..C.....C.....C..................G....................................  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      W  Y  D  G  I  K  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  F  L  
                    Query_12593  106  GGTATGATGGAATTAAAAAATACTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCAAGAACACCCTGTTTCTGC  195
V  93.3% (209/224)  IGHV3-33*03  155  ............G...T..........C.....................................A.............G....A.....  244
                                      W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------CDR3-IMGT----------->             
                                      Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  D  P  W  G  Q  G  
                    Query_12593  196  AGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGGGCATCGGCTGAGGGGTGGTTCGACCCCTGGGGCCAGGGAA  285
V  93.3% (209/224)  IGHV3-33*03  245  .A..............................G.G.....C...----------------------------------------------  288
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                                               
D  88.9% (8/9)      IGHD6-25*01  8    --------------------------------------------------...G.....-------------------------------  16
J  100.0% (46/46)   IGHJ5*02     6    -----------------------------------------------------------------.........................  30

                                                           
                                      T  L  V  T  V  S  S  
                    Query_12593  286  CCCTGGTCACCGTCTCCTCAG  306
J  100.0% (46/46)   IGHJ5*02     31   .....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_95215

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD3-16*02                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTATCG	ACATTGGTTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTATTTGACTAT	ARHYRHWLFDY	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	238	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  L  T  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_12594  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCCTCACCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (238/251)  IGHV4-39*01  49   ...............................G....A...G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12594  91   CTGGAGTGGATTGGGAGTTTGTATTATAGTGGCAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  94.8% (238/251)  IGHV4-39*01  139  ..................A.C...........G...............................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  H  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  H  W  L  F 
                    Query_12594  181  AAGAACCACTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACATTATCGACATTGGTTATTT  270
V  94.8% (238/251)  IGHV4-39*01  229  ........G..C........G....G...T.......................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-16*02  25   -----------------------------------------------------------------------......-------------  30
J  97.7% (42/43)    IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12594  271  GACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  97.7% (42/43)    IGHJ4*02     9    .....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_308233

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_12595  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_12595  91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_12595  181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_12595  271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_308232

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         355     3e-100
IGHD2-21*02                                                                                           19.9    0.15  
IGHJ5*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGAATAC	GGTGGTGACT	C	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATGAATACGGTGGTGACTCCAATTGGTTCGACCCC	VRDEYGGDSNWFDP	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	239	12	0	95.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  R  G 
                    Query_12596    1    ACCCTGTCCCTCACTTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  95.2% (239/251)  IGHV4-30-2*01  49   ..............C......................................................................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  S  Y  Y  N  P  S  I  K  S  R  G  T  I  S  I  D  T  S 
                    Query_12596    91   CTGGAGTGGATTGGGTACATCTATCATAGTGGGAGCTCCTACTACAACCCGTCCATCAAGAGTCGAGGCACCATCTCAATAGACACGTCC  180
V  95.2% (239/251)  IGHV4-30-2*01  139  ....................................A.................C............T......A...G......G....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  D  E  Y  G  G  D  S 
                    Query_12596    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCGGTGACCGCCGCGGACACGGCCGTCTATTATTGTGTCAGAGATGAATACGGTGGTGACTCC  270
V  95.2% (239/251)  IGHV4-30-2*01  229  .............................T.......................G.....C....C......-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (10/10)   IGHD2-21*02    11   ------------------------------------------------------------------------------..........--  20
J  97.9% (47/48)    IGHJ5*02       2    -----------------------------------------------------------------------------------------.  2

                                        -------------->                                
                                         N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12596    271  AATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  317
J  97.9% (47/48)    IGHJ5*02       3    ..C............................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_308235

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           357     1e-100
IGHD2-2*01                                                                                            14.1    8.5   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTATCGACTGTACCAT	TACCACCTGC	CGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTATCGACTGTACCATTACCACCTGCCGTTTTGACTTC	ASLIDCTITTCRFDF	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  N  S  R  N  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_12597  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAACAGTCGTAATTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  96.0% (238/248)  IGHV4-39*01  49   ..................A.....................G....A...G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  N  Y  S  G  T  T  Y  Y  T  A  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_12597  91   CTGGAGTGGATTGGGAGTATCAATTATAGTGGGACCACCTACTACACCGCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  96.0% (238/248)  IGHV4-39*01  139  .....................T............G...........A.C.........................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  I  D  C  T  I  T 
                    Query_12597  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGCCTTATCGACTGTACCATTACC  270
V  96.0% (238/248)  IGHV4-39*01  229  ...........................................................C........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.0% (9/10)     IGHD2-2*01   16   --------------------------------------------------------------------------------------....  19

                                      ----------------->                                  
                                       T  C  R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12597  271  ACCTGCCGTTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  90.0% (9/10)     IGHD2-2*01   20   .G....----------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_308234

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           389     2e-110
IGHD3-10*01                                                                                           12.2    38    
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	TCGGGG	GGGGCTTCGAATCGGTGGACCCCCCTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCGGGGGGGGCTTCGAATCGGTGGACCCCCCTCACTACTCCTACTACGCTATGGACGTC	ARLGGGFESVDPPHYSYYAMDV	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  T  L  R  I  S  C  K  T  S  G  Y  S  F  S  S  Y
                    Query_12598  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGTGAGACTCTGAGGATCTCCTGTAAGACTTCTGGATACAGCTTTTCCAGTTA  90
V  93.1% (269/289)  IGHV5-51*03  6    .......................................G...T......A.............GG................A....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  K  T  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  N  T  K  Y  S  P
                    Query_12598  91   TTGGATCGCCTGGGTGCGCCAGAAGACCGGGAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTAATACCAAATACAGTCC  180
V  93.1% (269/289)  IGHV5-51*03  96   C.......G..............T.C..................G............................G......G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  F  L  Q  W  S  S  R  K  A  A  D  T  A
                    Query_12598  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCGGAAGGCCGCGGACACCGC  270
V  93.1% (269/289)  IGHV5-51*03  186  .....................................................A.................T.......T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------------CDR3-IMGT--------------------------->           
                                        I  F  Y  C  A  R  L  G  G  G  F  E  S  V  D  P  P  H  Y  S  Y  Y  A  M  D  V  W  G  Q  G
                    Query_12598  271  CATATTTTACTGTGCGAGACTCGGGGGGGGCTTCGAATCGGTGGACCCCCCTCACTACTCCTACTACGCTATGGACGTCTGGGGCCAAGG  360
V  93.1% (269/289)  IGHV5-51*03  276  ...G.A.............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-10*01  14   --------------------......----------------------------------------------------------------  19
J  96.6% (57/59)    IGHJ6*02     4    -----------------------------------------------------......A........G.....................  40

                                                            
                                        T  T  V  T  V  S  S 
                    Query_12598  361  GACCACGGTCACCGTCTCCTCA  382
J  96.6% (57/59)    IGHJ6*02     41   ......................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_308237

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*04                                                                                           296     2e-82
IGHD2-21*01                                                                                           10.3    124  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*04	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATAAAGACCCCGGAGGGCGC	CTATT	TCTCG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATAAAGACCCCGGAGGGCGCCTATTTCTCGTACTACGGTATGGACGTC	ARIKTPEGAYFSYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	218	29	0	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  I  A  S  G  F  T  F  S  D  F  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12599  1    GGTCCCTGAGACTCTCCTGTATAGCCTCTGGATTCACCTTCAGTGATTTTACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGC  90
V  88.3% (218/247)  IGHV3-21*04  47   ....................GC......................AGC.A..G.................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  S  S  G  T  Y  T  Y  Y  A  D  S  L  Q  G  R  F  T  I  A  R  D  N  A  
                    Query_12599  91   AGTGGGTGTCATCCATTAGTAGTAGTGGGACTTACACATACTACGCAGACTCACTTCAGGGCCGATTCACCATCGCCAGAGACAACGCCA  180
V  88.3% (218/247)  IGHV3-21*04  137  .......C..................A.T.G.....T................G.GA.................T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  R  S  L  Y  L  Q  V  N  S  L  R  T  E  D  T  G  I  Y  Y  C  A  R  I  K  T  P  E  G  A  
                    Query_12599  181  AGAGGTCTCTGTATCTCCAAGTGAACAGCCTGAGAACCGAGGACACCGGCATATATTATTGTGCGAGGATAAAGACCCCGGAGGGCGCCT  270
V  88.3% (218/247)  IGHV3-21*04  227  ...AC..A........G...A..............G..........G.C.G.G.....C........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  22   ----------------------------------------------------------------------------------------..  23

                                      IMGT--------------------->                              
                                      Y  F  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_12599  271  ATTTCTCGTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  326
D  100.0% (5/5)     IGHD2-21*01  24   ...-----------------------------------------------------  26
J  100.0% (48/48)   IGHJ6*02     12   --------................................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_308236

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*04                                                                                           296     2e-82
IGHD2-21*01                                                                                           10.3    124  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*04	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATAAAGACCCCGGAGGGCGC	CTATT	TCTCG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGATAAAGACCCCGGAGGGCGCCTATTTCTCGTACTACGGTATGGACGTC	ARIKTPEGAYFSYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	218	29	0	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  I  A  S  G  F  T  F  S  D  F  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12600  1    GGTCCCTGAGACTCTCCTGTATAGCCTCTGGATTCACCTTCAGTGATTTTACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGC  90
V  88.3% (218/247)  IGHV3-21*04  47   ....................GC......................AGC.A..G.................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  S  I  S  S  S  G  T  Y  T  Y  Y  A  D  S  L  Q  G  R  F  T  I  A  R  D  N  A  
                    Query_12600  91   AGTGGGTGTCATCCATTAGTAGTAGTGGGACTTACACATACTACGCAGACTCACTTCAGGGCCGATTCACCATCGCCAGAGACAACGCCA  180
V  88.3% (218/247)  IGHV3-21*04  137  .......C..................A.T.G.....T................G.GA.................T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  R  S  L  Y  L  Q  V  N  S  L  R  T  E  D  T  G  I  Y  Y  C  A  R  I  K  T  P  E  G  A  
                    Query_12600  181  AGAGGTCTCTGTATCTCCAAGTGAACAGCCTGAGAACCGAGGACACCGGCATATATTATTGTGCGAGGATAAAGACCCCGGAGGGCGCCT  270
V  88.3% (218/247)  IGHV3-21*04  227  ...AC..A........G...A..............G..........G.C.G.G.....C........-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  22   ----------------------------------------------------------------------------------------..  23

                                      IMGT--------------------->                              
                                      Y  F  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_12600  271  ATTTCTCGTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  326
D  100.0% (5/5)     IGHD2-21*01  24   ...-----------------------------------------------------  26
J  100.0% (48/48)   IGHJ6*02     12   --------................................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_274569

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           343     2e-96
IGHD3-9*01                                                                                            23.8    0.010
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCGG	TTACGATTTTTTGTCTGG	G	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGCGGTTACGATTTTTTGTCTGGG	ARDRGYDFLSG	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  F  R  D  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12601  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATATTCAGAGATGGTTACTACTGGAGCTGGATCCGCCAACACCCAGGGAAGGGC  90
V  93.6% (235/251)  IGHV4-31*03  49   ......................................CAG...T.G...........................G...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_12601  91   CTGGAGTGGATTGGGTGCATCTATTACAGTGGGAGAACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATTTCAATTGACACCTCT  180
V  93.6% (235/251)  IGHV4-31*03  139  ................A..................C......................................A...G.A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  D  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  G  Y  D  F  L 
                    Query_12601  181  AAGGACCAGTTCTCCCTGAACCTGAGCTCTGTGACTGCCGCGGACACGGCCGTTTATTACTGCGCGAGAGATCGCGGTTACGATTTTTTG  270
V  93.6% (235/251)  IGHV4-31*03  229  ...A................G................................G........T........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (16/18)    IGHD3-9*01   4    -----------------------------------------------------------------------------.......A.....  16

                                      ----->                                
                                       S  G  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12601  271  TCTGGGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  308
D  88.9% (16/18)    IGHD3-9*01   17   A....---------------------------------  21
J  100.0% (32/32)   IGHJ4*02     15   ------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_224225

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           248     8e-68
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	ARGLLIEDPNYVWGSFRRNHNCYTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	40	11	0	78.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	92	22	0	80.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	201	43	0	82.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  Q  P  P  G  R  R  L  E 
                    Query_12602  1    ACCCTGTCCCTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGCAGCCTCCAGGGAGGAGACTGGAG  90
V  82.4% (201/244)  IGHV4-59*01  49   ..................A....C.......G.......A...G..........AG....A.C........C.......A.G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_12602  91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  82.4% (201/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  N  Y 
                    Query_12602  181  CAGTTGTCTCTCAACCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTCTTCTTATCGAAGATCCCAACTAT  270
V  82.4% (201/244)  IGHV4-59*01  229  .....C..C..G..G....G.TCT.....................GT.....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_12602  271  GTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  94.7% (36/38)    IGHJ3*01     13   --------------------------------------...................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_279336

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	273	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_12603  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCCTCTGGATACAGTTTTACCACCCA  90
V  94.8% (273/288)  IGHV5-51*01  6    .............................................................A...GT...........C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_12603  91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  94.8% (273/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_12603  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (273/288)  IGHV5-51*01  186  ...............G.........................T.........................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12603  271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  94.8% (273/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_274565

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           299     2e-83
IGHD3-3*01                                                                                            12.2    31   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	GCCCGAATTGGGGACCCCT	TTATTTTAC	TC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGGCCCGAATTGGGGACCCCTTTATTTTACTCAC	TTGPNWGPLYFTH	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	126	30	18	4	8	60
FR3-IMGT	127	239	114	104	9	1	91.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	255	225	21	9	88.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  D  D  A  W  M  S  W  V  R  Q  A  P  G  Q  G  L  
                    Query_12604  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCGTTTCGATGACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGACAGGGGCTGG  90
V  88.2% (225/255)  IGHV3-15*01  47   .......T...........................AC....AG.A..................................GA.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  Q  S  E  T  D  V           D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_12604  91   AGTGGGTTGGCCGTATTCAAAGTGAAACTGATGTTG---------ACTATGCTGCACCCGTGAAAGGCCGTTTCACTATCTCAAGAGATG  171
V  88.2% (225/255)  IGHV3-15*01  137  .................A....CA.........G..GGACAACAG....C..................A.A.....C.............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      D  S  N  N  M  V  Y  L  Q  M  H  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  G  P  N  W  G  
                    Query_12604  172  ATTCAAACAACATGGTGTATCTGCAAATGCACAGCCTGAAAACCGAGGACACAGCCGTGTATTATTGTACCACAGGCCCGAATTGGGGAC  261
V  88.2% (225/255)  IGHV3-15*01  227  .......A....C.C..............A..................................C..........---------------  301
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 

                                      GT-------------->                                  
                                      P  L  Y  F  T  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_12604  262  CCCTTTATTTTACTCACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  312
D  88.9% (8/9)      IGHD3-3*01   22   ----.....A...--------------------------------------  30
J  97.2% (35/36)    IGHJ4*02     13   ---------------..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_274564

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            380     1e-107
IGHD3-22*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTTG	ATTACTATGATAGTAGTGGTTA	CCCA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTTGATTACTATGATAGTAGTGGTTACCCAGACTAC	ASLDYYDSSGYPDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	114	0	0	100
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	244	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12605  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  99.6% (244/245)  IGHV4-4*02   49   ..............................................G...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_12605  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  99.6% (244/245)  IGHV4-4*02   139  ..........................................................................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  L  D  Y  Y  D  S  S  G 
                    Query_12605  181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGCCTTGATTACTATGATAGTAGTGGT  270
V  99.6% (244/245)  IGHV4-4*02   229  .................................................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (22/22)   IGHD3-22*01  3    ----------------------------------------------------------------------....................  22

                                      ----------->                                  
                                       Y  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12605  271  TACCCAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (22/22)   IGHD3-22*01  23   ..--------------------------------------------  24
J  100.0% (40/40)   IGHJ4*02     9    ------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_274567

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            325     3e-91
IGHD6-13*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACCTGGTACTCGGGGTTTTGACTAC	ARHLGTPGTRGFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	22	2	3	81.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	246	229	14	3	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_12606  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  87
V  93.1% (229/246)  IGHV4-4*02   49   ...............................G.....T........GTA.......................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  S  Y  H  S  G  R  T  N  Y  N  A  S  F  Q  S  R  V  T  I  S  V  D  T  S  K 
                    Query_12606  88   GAGTGGATTGGGGAATCCTATCATAGTGGGCGCACCAACTACAACGCGTCCTTCCAGAGTCGAGTCACCATATCAGTAGACACGTCCAAG  177
V  93.1% (229/246)  IGHV4-4*02   139  ...............AT.............A..............C.....C..A...........................A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  P  G  T  R 
                    Query_12606  178  AATCAATTCTCCCTGAATCTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACCTGGTACTCGG  267
V  93.1% (229/246)  IGHV4-4*02   229  ..C..G...........G....G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  D  Y  W   A  R  E  P  W  S  P  S  P  Q 
                    Query_12606  268  GGTTTTGACTACTGGG-CCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.7% (42/43)    IGHJ4*02     6    ---.............G.............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_95216

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           380     1e-107
IGHD2-21*01                                                                                           10.3    140   
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTTATCCTT	CATAT	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTTATCCTTCATATAACTACGGTATGGACGCC	ARSYPSYNYGMDA	302	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	172	21	19	2	0	90.5
FR3-IMGT	173	301	129	106	8	15	82.2
CDR3-IMGT (germline)	302	307	6	6	0	0	100
Total	N/A	N/A	305	276	14	15	90.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  V  R  L  S  C  A  A  S  G  F  T  V  S  
                    Query_12607  3    AGGTGCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCGTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTA  92
V  90.5% (276/305)  IGHV3-53*01  2    ..............G...................................C.......................................  91
                                         V  Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  

                                      T------><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------
                                      S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  L  I  Y  S  G  P  S  T  Y  D  A  
                    Query_12607  93   GCAATTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCACTTATTTATAGCGGTCCTAGCACATACGACGCAG  182
V  90.5% (276/305)  IGHV3-53*01  92   ....C...................................................G..............GG........---------  172
                                      S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T           

                                      --------------------------------------------------FR3-IMGT--------------------------------
                                      E  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  R  K  N  T  L  Y  L  Q  L  H  S  L  
                    Query_12607  183  AGACACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAATCGCAAGAACACACTGTATCTTCAATTGCACAGTCTGA  272
V  90.5% (276/305)  IGHV3-53*01  173  ------.............C..........................A......TC.........G............A..A....C....  256
                                            Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  

                                      ----------------------------><--------------CDR3-IMGT-------------->                      
                                      R  A  E  D  T  A  V  Y  Y  C  A  R  S  Y  P  S  Y  N  Y  G  M  D  A  W  G  Q  G  T  T  V  
                    Query_12607  273  GAGCCGAGGACACGGCCGTGTATTACTGTGCGAGATCTTATCCTTCATATAACTACGGTATGGACGCCTGGGGCCAAGGGACCACGGTCA  362
V  90.5% (276/305)  IGHV3-53*01  257  ...................................-------------------------------------------------------  291
                                      R  A  E  D  T  A  V  Y  Y  C  A  R                                                        
D  100.0% (5/5)     IGHD2-21*01  3    ---------------------------------------------.....----------------------------------------  7
J  98.0% (49/50)    IGHJ6*02     13   ---------------------------------------------------...............T.......................  51

                                                 
                                      T  V  S  S 
                    Query_12607  363  CCGTCTCCTCA  373
J  98.0% (49/50)    IGHJ6*02     52   ...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_274560

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-20*01                                                                                           347     7e-98
IGHD3-10*01                                                                                           10.3    116  
IGHJ3*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-20*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TGAGGTC	GAGTT	C	GCTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATGAGGTCGAGTTCGCTCTTGATATC	ARDEVEFALDI	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  S  S  G  F  T  F  S  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12608  1    GGTCCCTGAGACTCTCCTGTGCAAGCTCCGGATTCACCTTTAGCGATTATGGCATGAGTTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-20*01  47   .......................GC...T............GAT..............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  N  W  N  G  V  N  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12608  91   AGTGGGTCTCTGGTATTAATTGGAATGGAGTTAATACAGGTTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-20*01  137  ............................T.G..GC.......................................................  226
                                      E  W  V  S  G  I  N  W  N  G  G  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  T  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  E  V  E  F  A  L  
                    Query_12608  181  AGAACTCCCTGTATCTGCAAATGACCAGTCTGAGAGCCGAGGACACGGCCTTGTATTACTGTGCGAGGGATGAGGTCGAGTTCGCTCTTG  270
V  94.4% (236/250)  IGHV3-20*01  227  ........................A...............................C..........A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  H  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  19   -----------------------------------------------------------------------------.....--------  23
J  91.1% (41/45)    IGHJ3*02     5    -----------------------------------------------------------------------------------...T...  11

                                      ---->                                 
                                      D  I  W  G  Q  G  A  K  V  T  V  S  S 
                    Query_12608  271  ATATCTGGGGCCAAGGGGCAAAGGTCACCGTCTCCTCA  308
J  91.1% (41/45)    IGHJ3*02     12   .................A...T............T...  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_274563

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            349     3e-98
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ4*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-19*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGGG	AGCAGTGGC	CGCTTCATCG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGGAGCAGTGGCCGCTTCATCGTTGACTAC	ARGGSSGRFIVDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	94	20	0	82.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	257	34	0	88.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  T  F  S  N  Y
                    Query_12609  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTCAGGCTTCTGGATACACCTTCAGCAATTA  90
V  88.3% (257/291)  IGHV1-8*01   6    ..................G.........................................CA.....................C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        E  I  N  W  V  R  Q  A  A  G  Q  G  L  E  W  M  G  W  I  N  P  K  G  G  H  T  G  Y  A  Q
                    Query_12609  91   TGAAATCAATTGGGTGCGACAAGCCGCTGGACAAGGGCTTGAGTGGATGGGATGGATAAACCCTAAAGGTGGTCACACTGGCTATGCACA  180
V  88.3% (257/291)  IGHV1-8*01   96   ...T.....C...........G...A...............................G........CA.....A....A...........  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  S  T  I  G  S  N  G  T  A  Y  M  E  L  N  R  L  R  S  E  D  T  A
                    Query_12609  181  GAAATTCCAGGGCAGAGTCACCATGAGCACTATTGGTTCAAACGGCACAGCCTACATGGAACTCAACAGGTTGCGATCTGAGGACACGGC  270
V  88.3% (257/291)  IGHV1-8*01   186  ...G......................C..GG.ACACC..C.TAA................G..G.G...CC..A................  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                 
                                        V  Y  Y  C  A  R  G  G  S  S  G  R  F  I  V  D  Y  W  G  H  G  S  L  V  T  V  S  S 
                    Query_12609  271  CGTCTATTACTGTGCGAGAGGCGGGAGCAGTGGCCGCTTCATCGTTGACTACTGGGGCCACGGAAGCCTGGTCACCGTCTCCTCA  355
V  88.3% (257/291)  IGHV1-8*01   276  ...G.................----------------------------------------------------------------  296
                                        V  Y  Y  C  A  R  G                                                                
D  100.0% (9/9)     IGHD6-19*01  7    -------------------------.........---------------------------------------------------  15
J  95.1% (39/41)    IGHJ4*01     7    --------------------------------------------................A....C...................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_274562

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD6-25*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTC	ARQSSAGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	277	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  S  S  G  Y  D  F  L  D  Y
                    Query_12610  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGAGTTCTGGATACGACTTTCTCGACTA  90
V  95.2% (277/291)  IGHV5-51*01  6    ..............................A.....C...........................G...........AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_12610  91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  95.2% (277/291)  IGHV5-51*01  96   ........G.......................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12610  181  GTCATTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGAACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (277/291)  IGHV5-51*01  186  ...C.........................................C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  M  V  T  V  S  S
                    Query_12610  271  CAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTC  360
V  95.2% (277/291)  IGHV5-51*01  276  ..T..................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------...............................C...............  61

                                       
                                       
                    Query_12610  361  A  361
J  97.9% (47/48)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_177888

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           371     6e-105
IGHD6-13*01                                                                                           21.8    0.040 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	GCAGCAGCTGG	AC	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCAGCAGCTGGACTACGACTACTACTACGGTATTGACGTC	ARGQQLDYDYYYGIDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	243	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12611  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAATACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGG  90
V  97.6% (243/249)  IGHV3-33*01  47   ..........................................G..G.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  N  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12611  91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACAATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  97.6% (243/249)  IGHV3-33*01  137  .........................................T...C............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  Q  Q  L  D  Y  D  
                    Query_12611  181  AGAACACGCTGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGCAGCAGCTGGACTACGACT  270
V  97.6% (243/249)  IGHV3-33*01  227  ...................A.................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  8    ----------------------------------------------------------------------...........---------  18
J  96.7% (58/60)    IGHJ6*02     3    -----------------------------------------------------------------------------------...T...  9

                                      T------------------>                                 
                                      Y  Y  Y  G  I  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12611  271  ACTACTACGGTATTGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.7% (58/60)    IGHJ6*02     10   .............G.......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_293086

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           349     2e-98
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAC	ATGATTAC	CCTGATTCCA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAACATGATTACCCTGATTCCAGATGCTTTTGATATC	ARDNMITLIPDAFDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	237	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  S  S  I  N  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  A 
                    Query_12612  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTAGCTCCATCAACAGTGGAGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGCC  90
V  94.4% (237/251)  IGHV4-31*03  49   ..............................G.........G......T........................................G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  D  S  G  G  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_12612  91   CTGGAGTGGATTGGATACATCTATGACAGTGGGGGCACCTCCTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCACTAGACACGTCT  180
V  94.4% (237/251)  IGHV4-31*03  139  ..............G.........T........A......A...........................T.........G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       R  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  D  N  M  I  T  L  I 
                    Query_12612  181  AGGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACTGTCGCGGACACGGCCGTATATTACTGTGCGAGAGATAACATGATTACCCTGATT  270
V  94.4% (237/251)  IGHV4-31*03  229  .A...................C...............C...............G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-16*01  6    ---------------------------------------------------------------------------........-------  13

                                      ----------------->                                  
                                       P  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12612  271  CCAGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  100.0% (49/49)   IGHJ3*02     2    ---.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_247069

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           427     1e-121
IGHD6-19*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CCTGAGCTGGGAAGA	TATAGCAGTGGCT	CGCGA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACCTGAGCTGGGAAGATATAGCAGTGGCTCGCGATAC	AGPELGRYSSGSRY	292	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	73	1	0	98.6
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	108	6	0	94.7
CDR3-IMGT (germline)	292	297	6	5	1	0	83.3
Total	N/A	N/A	293	283	10	0	96.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_12613  5    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCA  94
V  96.6% (283/293)  IGHV5-51*03  2    ....G.............................................................................C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_12613  95   ACTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  184
V  96.6% (283/293)  IGHV5-51*03  92   G.........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  R  Q  W  S  S  L  K  A  S  D  
                    Query_12613  185  GTCCGTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCGGCAGTGGAGCAGCCTGAAGGCCTCGGACA  274
V  96.6% (283/293)  IGHV5-51*03  182  .C..........................C....C....A..................A..T.............................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  M  Y  Y  C  A  G  P  E  L  G  R  Y  S  S  G  S  R  Y  W  G  Q  G  T  L  V  T  V  P  
                    Query_12613  275  CCGCCATGTATTACTGTGCGGGACCTGAGCTGGGAAGATATAGCAGTGGCTCGCGATACTGGGGCCAGGGAACCCTGGTCACCGTCCCCT  364
V  96.6% (283/293)  IGHV5-51*03  272  ....................A..-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (13/13)   IGHD6-19*01  4    --------------------------------------.............---------------------------------------  16
J  97.3% (36/37)    IGHJ4*02     12   --------------------------------------------------------..............................T...  45

                                         
                                      S  
                    Query_12613  365  CAG  367
J  97.3% (36/37)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_247066

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           307     1e-85
IGHD1-26*01                                                                                           12.2    31   
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARAKGIAVIVDAFDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	220	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  *  I  R  Q  S  P  G  K  G  L  E 
                    Query_12614  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTAGATCCGGCAGTCCCCGGGGAAGGGACTGGAG  90
V  90.2% (220/244)  IGHV4-59*01  49   ..................A.....................G.................G..........C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  V  S  V  D  M  S  N  N 
                    Query_12614  91   TGGATTGGATATATCTATTACAGAGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAGACATGTCCAACAAC  180
V  90.2% (220/244)  IGHV4-59*01  139  ........G..............T....G.....A......C.....CC................CA.A..........C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  K  G  I  A  V  I  V  D 
                    Query_12614  181  CGGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGTGCGAGAGCTAAGGGTATCGCTGTTATAGTAGAT  270
V  90.2% (220/244)  IGHV4-59*01  229  .A...........AG.................T.......CG.....G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------------......----  8
J  91.8% (45/49)    IGHJ3*01     2    ---------------------------------------------------------------------------------------...  4

                                      ----------->                                  
                                       A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_12614  271  GCTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  316
J  91.8% (45/49)    IGHJ3*01     5    .........G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_247064

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            403     9e-115
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	269	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	154	27	27	0	0	100
FR3-IMGT	155	268	114	113	1	0	99.1
CDR3-IMGT (germline)	269	275	7	7	0	0	100
Total	N/A	N/A	274	266	8	0	97.1


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  I  R 
                    Query_12615  2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGATCAGG  91
V  97.1% (266/274)  IGHV6-1*01   31   ........G...T.G.......................................G......G....AG......................  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 
                    Query_12615  92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGA  181
V  97.1% (266/274)  IGHV6-1*01   121  ..........................................................................................  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_12615  182  ATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCA  271
V  97.1% (266/274)  IGHV6-1*01   211  .........A................................................................................  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------CDR3-IMGT--------->                                  
                                       R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12615  272  AGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  332
V  97.1% (266/274)  IGHV6-1*01   301  ....---------------------------------------------------------  304
                                       R                                                           
J  97.9% (46/47)    IGHJ3*02     4    --------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_247065

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD2-2*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12616  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.0% (214/246)  IGHV4-4*01   49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_12616  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACTAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.0% (214/246)  IGHV4-4*01   139  ..............A...T.....A.T..GAG...C........C.........A.............................T...AG  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_12616  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.0% (214/246)  IGHV4-4*01   229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01   13   ----------------------------------------------------------------------.....C..G...--------  24

                                      ----------->                                  
                                       G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_12616  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_247062

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           385     4e-109
IGHD4-4*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACGC	TGACGACAGT	GTTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACGCTGACGACAGTGTTAACTTTGATTAC	ARYADDSVNFDY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	46	5	0	90.2
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	104	10	0	91.2
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	294	270	24	0	91.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  N  F  M 
                    Query_12617  1    CAGGTCCAGCTTGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACTTCTGGTTACAACTTTATG  90
V  91.8% (270/294)  IGHV1-18*01  1    .....T.....G.............C...........................................G............C.....CC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  G  G  L  E  W  M  G  W  S  S  A  Y  N  G  N  T  N  Y 
                    Query_12617  91   AGCTATGGCATCAGTTGGGTGCGACAGGCCCCTGGAGGAGGACTTGAGTGGATGGGCTGGAGCAGCGCTTACAATGGTAACACAAACTAT  180
V  91.8% (270/294)  IGHV1-18*01  91   ........T.....C.....................CA...G..............A....T............................  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  D  F  Q  G  R  V  T  M  T  T  D  R  S  T  S  T  A  Y  L  V  L  R  S  L  S  S  D  D 
                    Query_12617  181  GCGCAGGACTTCCAGGGCAGAGTCACCATGACCACAGACAGATCCACGAGCACAGCCTACTTGGTGTTGAGGAGCCTGAGCTCTGACGAC  270
V  91.8% (270/294)  IGHV1-18*01  181  ..A...A.GC..............................C...................A...A.C.............A.........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  V  Y  Y  C  A  R  Y  A  D  D  S  V  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12617  271  ACGGCCGTGTATTATTGTGCGAGATACGCTGACGACAGTGTTAACTTTGATTACTGGGGACAGGGAACCCTGGTCACCGTCTCCTCAG  358
V  91.8% (270/294)  IGHV1-18*01  271  ..............C.........----------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                                 
D  90.0% (9/10)     IGHD4-4*01   1    -----------------------------....T.....-------------------------------------------------  10
J  95.6% (43/45)    IGHJ4*02     4    -------------------------------------------.......C........C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_28236

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           338     5e-95
IGHD2-2*02                                                                                            18.0    0.64 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCAAGCAGTCGGGATTGTCGAAGTAATGC	CTGCTATAC	GGAATCAGATCTTTACCTCAAT	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCAAGCAGTCGGGATTGTCGAAGTAATGCCTGCTATACGGAATCAGATCTTTACCTCAATTACGATATGGGCGTC	ASSSRDCRSNACYTESDLYLNYDMGV	238	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	228	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  T  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_12618  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGGACTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  95.0% (228/240)  IGHV4-59*01  49   ...............................G.........T.G.........................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_12618  91   TGGATTGGGTATATCTATTACAGTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGGCAGACACGTCCAAGAAC  180
V  95.0% (228/240)  IGHV4-59*01  139  ............................G..........................................A.T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       H  F  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  S  S  R  D  C  R  S  N  A 
                    Query_12618  181  CACTTCTCCCTGAAGGTGACCTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGCGTCAAGCAGTCGGGATTGTCGAAGTAATGCC  270
V  95.0% (228/240)  IGHV4-59*01  229  ..G............C...G...........................G..T.........------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD2-2*02   22   -----------------------------------------------------------------------------------------.  22

                                      --CDR3-IMGT--------------------------------->                                 
                                       C  Y  T  E  S  D  L  Y  L  N  Y  D  M  G  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_12618  271  TGCTATACGGAATCAGATCTTTACCTCAATTACGATATGGGCGTCTGGGGCCAAGGGACCACGGTCTCCGTCTCCTCA  348
D  100.0% (9/9)     IGHD2-2*02   23   ........----------------------------------------------------------------------  30
J  93.8% (45/48)    IGHJ6*02     15   ------------------------------....G.....A.........................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_247060

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           341     5e-96
IGHD2-21*02                                                                                           10.3    124  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	CGC	ACTGC	GTCAGAGAAGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCGCACTGCGTCAGAGAAGTTTTGATTAC	ARGALRQRSFDY	261	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	43	7	0	86
CDR1-IMGT	51	74	24	20	4	0	83.3
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	105	9	0	92.1
CDR3-IMGT (germline)	261	268	8	7	1	0	87.5
Total	N/A	N/A	268	243	25	0	90.7


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  I  C  G  V  S  G  G  S  F  S  N  Y  Q  W  S  W  I  R  
                    Query_12619  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCATTTGCGGTGTATCTGGTGGGTCCTTCAGTAATTACCAATGGAGCTGGATCCGCC  90
V  90.7% (243/268)  IGHV4-34*01  26   ........T.......T...................CC....C...C.A................GG....T.C................  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  A  S  Y  N  P  S  L  K  S  R  A  A  
                    Query_12619  91   AGCCCCCAGGGAAGGGTCTGGAGTGGATTGGTGAAATCAATCATAGTGGAAGTGCCAGCTACAACCCGTCCCTCAAGAGTCGAGCCGCCG  180
V  90.7% (243/268)  IGHV4-34*01  116  ................G..............G....................CA...A..........................T.A..A  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      V  S  V  D  T  S  K  S  Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_12619  181  TATCAGTAGACACGTCCAAGAGCCAGCTGTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGCGAGGCG  270
V  90.7% (243/268)  IGHV4-34*01  206  .....................A....T.C.............G...........................G............A....--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  

                                      ----CDR3-IMGT------------>                                  
                                      A  L  R  Q  R  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12619  271  CACTGCGTCAGAGAAGTTTTGATTACTGGGGCCAGGGAACGCTGGTCACCGTCTCTTCAG  330
D  100.0% (5/5)     IGHD2-21*02  18   -.....------------------------------------------------------  22
J  93.0% (40/43)    IGHJ4*02     6    -----------------.....C.................C..............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_247061

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           433     1e-123
IGHD5-12*01                                                                                           19.9    0.18  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTGGAGGG	TAGTGGCTAC	TTAGAACCCCTTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGGAGGGTAGTGGCTACTTAGAACCCCTTGACTACTACGGTATGGACGTC	ARLEGSGYLEPLDYYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_12620  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAACTA  90
V  97.9% (283/289)  IGHV5-51*03  6    ......................................................................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_12620  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  97.9% (283/289)  IGHV5-51*03  96   ..................................................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  A
                    Query_12620  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACCCCGC  270
V  97.9% (283/289)  IGHV5-51*03  186  ............................................G........................................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  L  E  G  S  G  Y  L  E  P  L  D  Y  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_12620  271  CATGTATTATTGTGCGAGATTGGAGGGTAGTGGCTACTTAGAACCCCTTGACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  97.9% (283/289)  IGHV5-51*03  276  .........C.........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD5-12*01  8    ---------------------------..........-----------------------------------------------------  17
J  100.0% (53/53)   IGHJ6*02     10   --------------------------------------------------........................................  49

                                                   
                                        T  V  S  S 
                    Query_12620  361  CACCGTCTCCTCA  373
J  100.0% (53/53)   IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_85988

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            349     2e-98
IGHD3-10*02                                                                                           14.1    8.5  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-10*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGGGAGATTC	TTACTACGTT	GTTGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGGGAGATTCTTACTACGTTGTTGGGTGGTTCGACCCC	ARDLGDSYYVVGWFDP	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	30	26	26	0	0	100
CDR1-IMGT	31	54	24	21	3	0	87.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	129	24	20	4	0	83.3
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  Y  M  T  W  V  R  Q  A  P  G  K  R  P  E  
                    Query_12621  5    CCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAACTATTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGAGGCCGGAGT  94
V  95.1% (235/247)  IGHV3-7*01   50   ..........................................G.....GG....G.........................G...T.....  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  A  N  I  N  Q  D  G  S  G  R  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  E  
                    Query_12621  95   GGGTGGCCAACATAAACCAAGATGGAAGTGGCAGATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCGAGA  184
V  95.1% (235/247)  IGHV3-7*01   140  ................G.............AG.A....................................................A...  229
                                      W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  G  D  S  Y  Y  V  
                    Query_12621  185  ACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGGGAGATTCTTACTACGTTG  274
V  95.1% (235/247)  IGHV3-7*01   230  .........A.........................................................-----------------------  296
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  90.0% (9/10)     IGHD3-10*02  4    -------------------------------------------------------------------------------......T...-  13

                                      ---------------->                                  
                                      V  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12621  275  TTGGGTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  325
J  97.8% (45/46)    IGHJ5*02     6    -----................................C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_85989

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           371     7e-105
IGHD5-12*01                                                                                           37.2    1e-06 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGCAAAGCAAGGAA	GGATATAGTGGCTACGATT	C	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGCAAAGCAAGGAAGGATATAGTGGCTACGATTCCTACTACGGTATGGACGTC	ARVQSKEGYSGYDSYYGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	243	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12622  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGCTTCAGTACTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.6% (243/249)  IGHV3-33*01  47   ....................................C........GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  W  Y  D  G  S  N  K  Y  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12622  91   AGTGGGTGTCAGTTATATGGTATGATGGAAGTAATAAATATTCTGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  97.6% (243/249)  IGHV3-33*01  137  ........G...............................C.A...............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  Q  S  K  E  G  Y  
                    Query_12622  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGTGCAAAGCAAGGAAGGATATA  270
V  97.6% (243/249)  IGHV3-33*01  227  .....................................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (19/19)   IGHD5-12*01  3    -----------------------------------------------------------------------------------.......  9

                                      R3-IMGT------------------------>                                 
                                      S  G  Y  D  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12622  271  GTGGCTACGATTCCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  100.0% (19/19)   IGHD5-12*01  10   ............-----------------------------------------------------  21
J  100.0% (52/52)   IGHJ6*02     11   -------------....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_153861

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           339     2e-95
IGHD3-16*02                                                                                           39.1    3e-07
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	CCAGGCCGG	TTACGTTTGGGGGCGTTATCGTT	TTTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGCCAGGCCGGTTACGTTTGGGGGCGTTATCGTTTTTCCTACTTTGACTCC	ARGQAGYVWGRYRFSYFDS	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  Y  S  D  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12623  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCATACAGTGATTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGTCTGGAA  90
V  94.3% (231/245)  IGHV4-34*01  49   ...................................C.T.....G...........G...........................G.....G  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  K  H  S  G  S  T  Y  S  N  P  S  L  K  S  R  V  T  T  S  V  D  T  S  K  N 
                    Query_12623  91   TGGATTGGGGAAATCAAGCATAGTGGAAGCACCTACTCCAACCCGTCCCTCAAGAGTCGAGTCACCACATCAGTAGACACTTCCAAGAAC  180
V  94.3% (231/245)  IGHV4-34*01  139  .................T...............A...A.............................T............G.........  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  Q  A  G  Y  V  W  G  R 
                    Query_12623  181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGCGAGGCCAGGCCGGTTACGTTTGGGGGCGT  270
V  94.3% (231/245)  IGHV4-34*01  229  .............A......C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  95.7% (22/23)    IGHD3-16*02  10   --------------------------------------------------------------------------.............A..  25

                                      ----------------------->                                  
                                       Y  R  F  S  Y  F  D  S  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_12623  271  TATCGTTTTTCCTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  328
D  95.7% (22/23)    IGHD3-16*02  26   .......---------------------------------------------------  32
J  95.7% (45/47)    IGHJ4*02     2    -----------...........A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_331879

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           316     2e-88
IGHD3-10*01                                                                                           10.3    116  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGA	CTTCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGACTTCAGGCCTTTGACTCC	ARGGLQAFDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  G  G  F  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_12624  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAACAGTGGTGGATTCTACTGGACTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  90.4% (226/250)  IGHV4-31*03  49   .......................C................G.........T.A........GC...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  Y  T  G  H  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  L  D  T  S 
                    Query_12624  91   CTAGAGTGGATTGGTTACATCTTTTACACTGGACACACCTACTACAATCCGTCCCTCAGGAGTCGACTTACCATTTCACTGGACACATCT  180
V  90.4% (226/250)  IGHV4-31*03  139  ..G...........G.......A.....G...GAG............C..........A.......G.......A...G.A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       E  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  L  Q  A  F  D 
                    Query_12624  181  GAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGGGGACTTCAGGCCTTTGAC  270
V  90.4% (226/250)  IGHV4-31*03  229  A...................G.....C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------.....---------------  20
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12624  271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.7% (43/44)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_331878

Length=429
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD3-9*01                                                                                            12.2    40    
IGHJ6*02                                                                                              108     1e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	ACGGGCCCCA	ATTTCGATA	GCACTTCGGAACGCTGGGGCCGACGAAAGAAAATATC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAACGGGCCCCAATTTCGATAGCACTTCGGAACGCTGGGGCCGACGAAAGAAAATATCACTACTACTACAACGGTATGGACGTC	ARQRAPISIALRNAGADERKYHYYYNGMDV	284	373	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  E  P  G  E  S  L  K  I  S  C  K  G  S  G  S  G  F  N  T  Y
                    Query_12625  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAGAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATCCGGCTTTAACACGTA  90
V  95.5% (278/291)  IGHV5-51*01  6    .............................A.A..........................................A.A......C..GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  D  W  M  G  I  I  Y  V  D  D  S  D  T  T  Y  S  P
                    Query_12625  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGACTGGATGGGGATCATCTATGTTGATGACTCTGATACCACATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ........G.................................G..................CC..G..............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12625  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------------------------CDR3-IMGT---------------------------
                                        M  Y  Y  C  A  R  Q  R  A  P  I  S  I  A  L  R  N  A  G  A  D  E  R  K  Y  H  Y  Y  Y  N
                    Query_12625  271  CATGTATTACTGTGCGAGACAACGGGCCCCAATTTCGATAGCACTTCGGAACGCTGGGGCCGACGAAAGAAAATATCACTACTACTACAA  360
V  95.5% (278/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  88.9% (8/9)      IGHD3-9*01   3    -------------------------------...A.....--------------------------------------------------  11
J  98.3% (58/59)    IGHJ6*02     4    -----------------------------------------------------------------------------...........T.  16

                                      ------------>                                 
                                        G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12625  361  CGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  406
J  98.3% (58/59)    IGHJ6*02     17   ..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 42181992


Query= Query_331877

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12626  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  L  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_12626  91   AGTGGGTCTCAGCGATTCTTGGGAGCGGTAGTAGCACATACTACTCAGACTCCGTAAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  .............T...AG...T..T...G..............G..........G...........................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_12626  181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  93.2% (233/250)  IGHV3-23*01  227  ...............................G....................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12626  271  ATTCACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_270991

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           325     3e-91
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              31.5    1e-04


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGGGAAAAGGACTGGGATCG	TGGGGG	TTCCGTTTTTCCCTGCG	GGGGT	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12627  1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.0% (225/242)  IGHV4-59*08  49   ....................T......................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       L  S  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  R  N 
                    Query_12627  91   TTGAGTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGTCGAGTCACCATCTCAGTAGACACGTCGAGGAAC  180
V  93.0% (225/242)  IGHV4-59*08  139  .G..T...G...A........A........A.....................A...............A..............C.A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT---------------------------------------------------->                                 
                                       Q  F  S  L  S  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  K  D  W  D  R  G  G 
                    Query_12627  181  CAGTTCTCCCTGAGCGTGAACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCGAGCCGGGAAAAGGACTGGGATCGTGGGGGT  270
V  93.0% (225/242)  IGHV4-59*08  229  .............AGC...G.........C................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD3-16*01  17   -----------------------------------------------------------------------------------......-  22

                                                                                     
                                       S  V  F  P  C  G  G  P  G  P  L  V  A  A  S  S
                    Query_12627  271  TCCGTTTTTCCCTGCGGGGGTCCGGGACCCCTGGTCGCCGCCTCCTC  317
J  83.9% (26/31)    IGHJ4*02     16   ----------------....C.A....A........A...T......  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_331875

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           322     2e-90
IGHD2-15*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGCCCGCTGCCC	GTGGTGGGTGCTA	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATCAGCCCGCTGCCCGTGGTGGGTGCTATGACTAC	VRDQPAARGGCYDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  L  R  S  H  W  M  H  W  V  R  Q  D  P  G  K  G  L  
                    Query_12628  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCCTCAGAAGCCACTGGATGCACTGGGTCCGCCAAGATCCAGGGAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-74*01  47   .....................C................T....T...T........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  A  R  I  N  F  D  G  S  S  T  S  Y  V  D  S  V  K  S  R  F  N  I  S  R  D  N  A  
                    Query_12628  91   TATGGGTCGCACGTATTAATTTTGATGGGAGTAGTACAAGTTATGTGGACTCCGTCAAGAGCCGATTCAACATCTCCAGAGACAACGCCA  180
V  91.2% (228/250)  IGHV3-74*01  137  .G......T...........AG............C.....C..C.C.........G...G.........C....................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  G  V  Y  Y  C  V  R  D  Q  P  A  A  R  G  
                    Query_12628  181  AGAACACATTGTATCTGCAAATGAATAGTCTGAGAGTCGAGGACACGGGTGTGTATTACTGTGTAAGAGATCAGCCCGCTGCCCGTGGTG  270
V  91.2% (228/250)  IGHV3-74*01  227  .......GC................C..........C...........C..............C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.6% (11/13)    IGHD2-15*01  15   ------------------------------------------------------------------------------------.....A  20

                                      ------------->                                  
                                      G  C  Y  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_12628  271  GGTGCTATGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  318
D  84.6% (11/13)    IGHD2-15*01  21   .C.....-----------------------------------------  27
J  97.6% (40/41)    IGHJ4*02     8    -------...................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_85984

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            324     8e-91
IGHD6-13*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGTCCAC	TATAGCACCAGCTGGTA	TC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGTCCACTATAGCACCAGCTGGTATCACTTTGACTAC	ARGVHYSTSWYHFDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	22	2	0	91.7
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	123	24	22	2	0	91.7
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	231	219	12	0	94.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  D  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  
                    Query_12629  14   GTGCAGCCTCTGGATTCACCTTTAGTGACTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAA  103
V  94.8% (219/231)  IGHV3-7*01   65   ..........................AG............C.................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      K  Q  D  G  N  E  Q  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_12629  104  AGCAAGATGGAAATGAGCAACACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTTTATTTGC  193
V  94.8% (219/231)  IGHV3-7*01   155  ............G....A..T.............................................................G...C...  244
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      H  M  N  S  L  R  V  E  D  T  A  L  Y  F  C  A  R  G  V  H  Y  S  T  S  W  Y  H  F  D  Y  
                    Query_12629  194  ACATGAACAGCCTGAGAGTCGAGGACACGGCTCTGTATTTCTGTGCGAGAGGAGTCCACTATAGCACCAGCTGGTATCACTTTGACTACT  283
V  94.8% (219/231)  IGHV3-7*01   245  .A................C.............G......A...........---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  94.1% (16/17)    IGHD6-13*01  4    -----------------------------------------------------------.......G.........--------------  20
J  88.9% (40/45)    IGHJ4*02     4    ------------------------------------------------------------------------------............  15

                                                                       
                                      W  G  R  G  T  L  I  S  A  S  S  
                    Query_12629  284  GGGGCCGGGGAACCCTGATCAGTGCCTCCTCAG  316
J  88.9% (40/45)    IGHJ4*02     16   ......A..........G...CC.T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_85985

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           339     2e-95
IGHD2-15*01                                                                                           14.1    9.9  
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	GGCC	GGATATT	CATCTGATGGACGTGAATATATGACCCCGTTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGGGCCGGATATTCATCTGATGGACGTGAATATATGACCCCGTTGTTTGACTTT	SRAGYSSDGREYMTPLFDF	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	68	7	0	90.7
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	46	5	0	90.2
CDR2-IMGT	153	176	24	19	5	0	79.2
FR3-IMGT	177	290	114	98	16	0	86
CDR3-IMGT (germline)	291	295	5	4	1	0	80
Total	N/A	N/A	293	255	38	0	87


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I 
                    Query_12630  3    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGACAATCTCCTGCCAGGCTTCCGGTTACAGTTTTATC  92
V  87.0% (255/293)  IGHV1-18*04  1    .....T.....G...........................................AGG........A.......T.......CC....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  P  H  K  G  N  T  K  Y 
                    Query_12630  93   AACTACGGTATCAGTTGGGTGCGACAGGCCCCTGGGCAGGGGCTCGAGTGGATGGGTTGGATCGGCCCGCACAAAGGTAACACAAAATAT  182
V  87.0% (255/293)  IGHV1-18*04  91   .G............C....................A..A.....T...........A......A..G.TT....T...........C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  H  L  D  V  R  N  L  R  S  D  D 
                    Query_12630  183  GCACAGAGTTTCCAGGGCAGAGTCACGATGACCACAGACACATTGACGGGCACAGCTCACCTGGACGTGAGGAACCTGCGATCTGACGAC  272
V  87.0% (255/293)  IGHV1-18*04  181  .......AGC................C................CC...A.......CT..A....GC......G....A...........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  V  Y  Y  C  S  R  A  G  Y  S  S  D  G  R  E  Y  M  T  P  L  F  D  F  W  G  Q  G  T 
                    Query_12630  273  ACGGCCGTCTATTACTGTTCGAGGGCCGGATATTCATCTGATGGACGTGAATATATGACCCCGTTGTTTGACTTTTGGGGCCAGGGAACC  362
V  87.0% (255/293)  IGHV1-18*04  271  ........G.........G....-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (7/7)     IGHD2-15*01  2    ---------------------------.......--------------------------------------------------------  8
J  90.7% (39/43)    IGHJ4*02     6    ------------------------------------------------------------------.......AC...............  29

                                                         
                                       P  V  S  V  S  S  
                    Query_12630  363  CCGGTCTCCGTCTCCTCAG  381
J  90.7% (39/43)    IGHJ4*02     30   .T....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_85986

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           355     3e-100
IGHD3-16*02                                                                                           52.6    2e-11 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AG	ATTATGATTACGTTTGGGGGAGTTATC	TCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGATTATGATTACGTTTGGGGGAGTTATCTCCACTAC	AREDYDYVWGSYLHY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	236	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  F  D  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12631  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCGACAGTACTTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (236/245)  IGHV4-59*02  49   ..................................C..T.....G...C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  E  D  T  S  K  N 
                    Query_12631  91   TGGATTGGATATATTAATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGAAGACACGTCCAAGAAC  180
V  96.3% (236/245)  IGHV4-59*02  139  ........G.....CT.........................................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  D  Y  D  Y  V  W  G  S 
                    Query_12631  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTACTACTGTGCGAGAGAAGATTATGATTACGTTTGGGGGAGT  270
V  96.3% (236/245)  IGHV4-59*02  229  ..................................................T..............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (27/27)   IGHD3-16*02  3    -------------------------------------------------------------------.......................  25

                                      ----------->                                  
                                       Y  L  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12631  271  TATCTCCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (27/27)   IGHD3-16*02  26   ....------------------------------------------  29
J  100.0% (39/39)   IGHJ4*02     10   -------.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_85987

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           308     4e-86
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	239	271	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	20	4	0	83.3
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	124	24	22	2	0	91.7
FR3-IMGT	125	238	114	106	8	0	93
Total	N/A	N/A	225	211	14	0	93.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 
                    Query_12632  14   TGTGCAGCGTCTGGATTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATA  103
V  93.8% (211/225)  IGHV3-33*03  64   ....................C..C.....C.....C......................................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       W  Y  D  G  I  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  F  R  D  D  S  K  N  T  L  F  L 
                    Query_12632  104  TGGTATGATGGAATTAAGAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTTCAGAGACGACTCCAAGAACACCCTGTTTCTG  193
V  93.8% (211/225)  IGHV3-33*03  154  .............G...T........................................C.......A.............G....A....  243
                                       W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------CDR3-IMGT----------->            
                                       Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  D  P  W  G  Q  G 
                    Query_12632  194  CAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCGACCCCTGGGGCCAGGGA  283
V  93.8% (211/225)  IGHV3-33*03  244  ..A..............................G.G.....C...---------------------------------------------  288
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                                              
D  90.9% (10/11)    IGHD6-13*01  7    --------------------------------------------------....G......-----------------------------  17
J  97.8% (45/46)    IGHJ5*02     6    ------------------------------------------------------------------........................  29

                                                            
                                       T  Q  V  T  V  S  S  
                    Query_12632  284  ACCCAGGTCACCGTCTCCTCAG  305
J  97.8% (45/46)    IGHJ5*02     30   ....T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_113192

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           305     3e-85
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	125	24	20	4	0	83.3
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	233	214	19	0	91.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 
                    Query_12633  15   TGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGCGATT  104
V  91.8% (214/233)  IGHV3-23*01  64   .........................G..G.T.....A....C............................................T...  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       T  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  T  K  N  T  L  Y  L 
                    Query_12633  105  ACTGGGAGTGGTAGTAGTACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTACACCAAGAACACGCTGTATCTG  194
V  91.8% (214/233)  IGHV3-23*01  154  .G...T......G....C.........G......................................A.TT....................  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------CDR3-IMGT----------------->
                                       L  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  Y  S  P  L  D  Y 
                    Query_12633  195  CTAATGAACAGCCTTACAGCCGAGGACACGGCCGTCTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC  284
V  91.8% (214/233)  IGHV3-23*01  244  .A............G.G..................A..............A..-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (10/10)   IGHD3-22*01  17   ------------------------------------------------------------------..........--------------  26
J  100.0% (42/42)   IGHJ4*02     7    ----------------------------------------------------------------------------------........  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12633  285  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (42/42)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_113193

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           294     7e-82
IGHD2-21*01                                                                                           14.1    9.6  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTGTCGGATCTACCGGGGCCCGATA	TGATTGC	ACAAATTCTGTTTGTCATCGGGAGCCCCCATCAGCCCCTTTCGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTGTCGGATCTACCGGGGCCCGATATGATTGCACAAATTCTGTTTGTCATCGGGAGCCCCCATCAGCCCCTTTCGGAGTTGACTAC	ATVGSTGARYDCTNSVCHREPPSAPFGVDY	243	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	41	10	0	80.4
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	217	29	0	88.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  S  L  S  C  A  A  S  G  F  T  F  S  D  Y  F  M  T  W  I  R  Q  A  P  G  Q  G  L  
                    Query_12634  1    GGTCCCTGAGCCTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTTCATGACCTGGATACGCCAGGCTCCAGGGCAGGGGCTGG  90
V  88.2% (217/246)  IGHV3-11*01  47   ..........A........................................A.....G......C...............A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  V  I  A  Y  I  S  G  S  G  S  A  I  K  Y  S  D  S  V  R  R  R  F  T  I  S  R  D  N  A  
                    Query_12634  91   AGGTCATCGCGTACATCAGTGGTAGTGGTAGTGCCATAAAGTACTCAGACTCTGTGAGGCGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  88.2% (217/246)  IGHV3-11*01  137  ..TGGG.TT.A.....T...A...........A.....T.C...G............A.G..............................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      R  K  S  L  Y  L  Q  M  N  S  L  G  A  D  D  S  A  I  Y  Y  C  A  T  V  G  S  T  G  A  R  
                    Query_12634  181  GGAAGTCACTGTATCTGCAAATGAACAGCCTGGGCGCCGACGACTCGGCCATTTACTACTGTGCGACTGTCGGATCTACCGGGGCCCGAT  270
V  88.2% (217/246)  IGHV3-11*01  227  A...C...........................A.A.....G...A.....G.G..T..........------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      -------------CDR3-IMGT--------------------------------------->                            
                                      Y  D  C  T  N  S  V  C  H  R  E  P  P  S  A  P  F  G  V  D  Y  W  G  Q  G  I  L  V  S  V  
                    Query_12634  271  ATGATTGCACAAATTCTGTTTGTCATCGGGAGCCCCCATCAGCCCCTTTCGGAGTTGACTACTGGGGCCAGGGAATTCTGGTCTCCGTCT  360
D  100.0% (7/7)     IGHD2-21*01  16   -.......----------------------------------------------------------------------------------  22
J  92.9% (39/42)    IGHJ4*02     7    ------------------------------------------------------.....................CC......A......  42

                                            
                                      S  S  
                    Query_12634  361  CCTCAG  366
J  92.9% (39/42)    IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_113196

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12635  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ......................................C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_12635  91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P 
                    Query_12635  181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC  270
V  90.6% (221/244)  IGHV4-59*01  229  ...........G...C....C...........T............G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  95.7% (44/46)    IGHJ5*02     6    ------------------------------------------------------------------------------............  17

                                                                        
                                       W  G  Q  G  A  L  V  S  V  S  S  
                    Query_12635  271  TGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  304
J  95.7% (44/46)    IGHJ5*02     18   ............A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_113197

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           333     1e-93
IGHD3-16*02                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTATCG	ACATTGGTTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTATTTGACTAT	ARHYRHWLFDY	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	232	19	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  R  N  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_12636  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCGTAAGCAGTAGGAATTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  92.4% (232/251)  IGHV4-39*01  49   .............................T......A.C........T.G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  W  R  G  S  P  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12636  91   CTGGAGTGGATTGGGAGTATCTATTGGCGTGGCAGTCCCTACTACAATCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  92.4% (232/251)  IGHV4-39*01  139  .........................ATA....G..CA..........C................................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  H  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  H  W  L  F 
                    Query_12636  181  AAGAACCACTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACATTATCGACATTGGTTATTT  270
V  92.4% (232/251)  IGHV4-39*01  229  ........G..C........G....G...T.......................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-16*02  25   -----------------------------------------------------------------------......-------------  30
J  97.7% (42/43)    IGHJ4*02     6    ---------------------------------------------------------------------------------------...  8

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12636  271  GACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  97.7% (42/43)    IGHJ4*02     9    .....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_113194

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD6-13*01                                                                                           14.1    9.4   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AAGCAGC	GCTGGTA	GGACCAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGTAGGACCAAATACGGTATGGACGTC	ARQSSAGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	268	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  R  S  S  G  Y  D  F  L  D  Y
                    Query_12637  1    GCAGCTGGTGCAGTCTGGAGCAGAGCTAAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGAGTTCTGGGTACGACTTTCTCGACTA  90
V  92.1% (268/291)  IGHV5-51*01  6    .........................G.G..A.....C.........................A.G.......A...AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_12637  91   CTGGATCGTCTGGGTGCGCCAAATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGTCC  180
V  92.1% (268/291)  IGHV5-51*01  96   ........G............G..........................................................G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  A
                    Query_12637  181  GTCCTTCCGAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGCGCAGTCTGAAGGCCTCGGACACCGC  270
V  92.1% (268/291)  IGHV5-51*01  186  ........A....................C...............C..................A....C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_12637  271  CAAGTATTACTGTGCGAGACAAAGCAGCGCTGGTAGGACCAAATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  360
V  92.1% (268/291)  IGHV5-51*01  276  ..T..................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-13*01  14   ----------------------------.......-------------------------------------------------------  20
J  100.0% (48/48)   IGHJ6*02     15   -------------------------------------------...............................................  61

                                       
                                       
                    Query_12637  361  A  361
J  100.0% (48/48)   IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_169749

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_12638  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG....T..............A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12638  91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.4% (228/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_12638  181  CAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  ...............C...G...........................G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_12638  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_169747

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           262     4e-72
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ5*01                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GATGTCTTATCGAGATGATTA	TGGTTATTATTAC	ATG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGATGTCTTATCGAGATGATTATGGTTATTATTACATGGACTCT	AKEMSYRDDYGYYYMDS	237	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	20	4	0	83.3
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	14	10	0	58.3
FR3-IMGT	123	236	114	97	17	0	85.1
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	233	200	33	0	85.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  R  N  Y  G  M  Y  W  V  R  Q  G  P  G  K  G  L  E  W  V  A  V  L 
                    Query_12639  12   TGTGCAGCCTCTGGATTCACCTTTAGAAATTATGGCATGTACTGGGTCCGCCAGGGTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTCTC  101
V  85.8% (200/233)  IGHV3-30*18  64   .......................C..T.GC.........C...............C...............................A.A  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       A  H  D  G  F  G  E  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  S  T  L  Y  L 
                    Query_12639  102  GCACATGATGGATTTGGTGAGCACTATGCAGACTCCGTGAAGGGCCGATTCACCATTTCCAGAGACAATTCGAGGAGCACTCTGTATTTG  191
V  85.8% (200/233)  IGHV3-30*18  154  T..T........AG.AA.A.AT..................................C..............C.A..A...G......C..  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------------CDR3-IMGT---------------
                                       Q  L  N  N  L  R  P  E  D  S  G  P  Y  Y  C  A  K  E  M  S  Y  R  D  D  Y  G  Y  Y  Y  M 
                    Query_12639  192  CAATTGAACAACTTGAGACCTGAGGACTCGGGTCCCTATTATTGTGCGAAAGAGATGTCTTATCGAGATGATTATGGTTATTATTACATG  281
V  85.8% (200/233)  IGHV3-30*18  244  ...A......G.C.....G........A...C.GTG.....C...........-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  92.3% (12/13)    IGHD3-22*01  19   --------------------------------------------------------------------------.........C...---  31

                                      ----->                                  
                                       D  S  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_12639  282  GACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  321
J  92.5% (37/40)    IGHJ5*01     12   .....C........A.....................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_169744

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     6e-104
IGHD3-10*01                                                                                           23.8    0.011 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	AGSGSGNYEGWLDP	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	22	2	0	91.7
FR2-IMGT	75	125	51	50	1	0	98
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	108	6	0	94.7
CDR3-IMGT (germline)	261	263	3	3	0	0	100
Total	N/A	N/A	263	249	14	0	94.7


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  
                    Query_12640  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGC  90
V  94.7% (249/263)  IGHV4-59*01  26   ................T................................................AG.......................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_12640  91   AGCCCCCCGGGAAGGGACTGGAGTGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  94.7% (249/263)  IGHV4-59*01  116  .......A...............................AT........G.G......................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  G  T  P  K  N  Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  G  S  
                    Query_12640  181  TATCAGTAGGCACGCCCAAGAACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGGGGTCAG  270
V  94.7% (249/263)  IGHV4-59*01  206  .........A....T.....................A......C.........G................G............-------  288
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A        
D  93.3% (14/15)    IGHD3-10*01  11   -----------------------------------------------------------------------------------------.  11

                                      -------CDR3-IMGT--------------->                                  
                                      G  S  G  N  Y  E  G  W  L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12640  271  GTTCGGGGAATTATGAGGGCTGGCTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  93.3% (14/15)    IGHD3-10*01  12   .........G....----------------------------------------------------  25
J  97.9% (46/47)    IGHJ5*02     5    -------------------....T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_113199

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           346     2e-97
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTCTGTG	AGCAGTGCCTGGT	CGTTTGGTCCCCCCCCCCGACTCTACTTCCTC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCTGTGAGCAGTGCCTGGTCGTTTGGTCCCCCCCCCCGACTCTACTTCCTCGACTTC	ARHSVSSAWSFGPPPRLYFLDF	250	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	135	27	21	0	6	77.8
FR3-IMGT	136	249	114	106	8	0	93
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	241	10	6	93.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  H  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_12641  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGCAGTTACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.8% (241/257)  IGHV4-39*01  49   ...............................................T......T...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  N  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D 
                    Query_12641  91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCAACACCAACTACAACCCGTCCCTCAAGAGTCGAGTAACCATGTCGGTAGAC  180
V  93.8% (241/257)  IGHV4-39*01  139  ...................................------....T............................C.....A..C......  222
                                       L  E  W  I  G  S  I  Y  Y  S  G  S        T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------------
                                       T  S  K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  T  Y  Y  C  A  R  H  S  V  S  S 
                    Query_12641  181  ACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCAGACACGGCTACATATTACTGTGCGAGACATTCTGTGAGCAGT  270
V  93.8% (241/257)  IGHV4-39*01  223  ................................C........................GTG.................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  92.3% (12/13)    IGHD6-19*01  7    ------------------------------------------------------------------------------------......  12

                                      --------CDR3-IMGT--------------------------->                                  
                                       A  W  S  F  G  P  P  P  R  L  Y  F  L  D  F  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_12641  271  GCCTGGTCGTTTGGTCCCCCCCCCCGACTCTACTTCCTCGACTTCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  349
D  92.3% (12/13)    IGHD6-19*01  13   .G.....------------------------------------------------------------------------  19
J  95.0% (38/40)    IGHJ4*02     9    ---------------------------------------....A..............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_169742

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         392     2e-111
IGHD7-27*01                                                                                           18.0    0.64  
IGHJ5*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	CTAACTGGG	ACCGGGGCCCTTTGA	ACCAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTAACTGGGACCGGGGCCCTTTGAACCAC	ATNWDRGPLNH	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	269	18	0	93.7


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  R  F  T  S  Y
                    Query_12642    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCGCTGAGGATCTCCTGTAAGGGTTCTGGATACAGGTTTACCAGCTA  90
V  93.7% (269/287)  IGHV5-10-1*01  6    .............................................T................................C...........  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  N  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  N  P  R  D  S  Y  I  N  Y  S  P
                    Query_12642    91   CTGGATCAACTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAACATTAATCCTCGTGACTCTTATATCAACTATAGCCC  180
V  93.7% (269/287)  IGHV5-10-1*01  96   ........G..........................................G.GG...G.....A............C......C.....  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  F  S  T  D  T  S  I  N  T  A  Y  L  Q  W  S  S  R  K  A  S  D  T  A
                    Query_12642    181  GTCCTTCCAAGGCCACGTCACCTTCTCGACTGACACCTCCATCAACACTGCCTACCTGCAGTGGAGCAGCCGGAAGGCCTCGGACACCGC  270
V  93.7% (269/287)  IGHV5-10-1*01  186  ......................A....AG......AG.......G..........................T..................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------CDR3-IMGT----------->                                  
                                          I  Y  Y  C  A  T  N  W  D  R  G  P  L  N  H  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_12642    271  CATATATTACTGTGCGACTAACTGGGACCGGGGCCCTTTGAACCACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  350
V  93.7% (269/287)  IGHV5-10-1*01  276  ...G.............---------------------------------------------------------------  292
                                          M  Y  Y  C  A                                                                 
D  100.0% (9/9)     IGHD7-27*01    1    -----------------.........------------------------------------------------------  9
J  94.9% (37/39)    IGHJ5*02       13   -----------------------------------------...C..............C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_169743

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     8e-92
IGHD2-21*01                                                                                           10.3    117  
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-21*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TA	GGTGA	AGCCCAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGTGAAGCCCAGTACTGGTACTTCGATCTC	ARVGEAQYWYFDL	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  D  S  I  S  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_12643  4    CCCTGAGACTCTCCTGTAGTGTTTCTGGTGACTCAATCAGTGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.0% (226/243)  IGHV4-59*01  50   .....TCC...A....C.C...C.......G...C......A...A............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  T  S  E  N  
                    Query_12643  94   GGATTGGGTATATCTATTACAGTGGGAGCACCGACTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTCGACACGTCCGAGAACA  183
V  93.0% (226/243)  IGHV4-59*01  140  ................................A.............................A..........A.........A.....C  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      K  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  G  E  A  Q  Y  W  Y  F  
                    Query_12643  184  AGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTAGGTGAAGCCCAGTACTGGTACTTCG  273
V  93.0% (226/243)  IGHV4-59*01  230  ..................G............................................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (5/5)     IGHD2-21*01  14   -----------------------------------------------------------------.....--------------------  18
J  100.0% (52/52)   IGHJ2*01     2    -----------------------------------------------------------------------------.............  14

                                      ---->                                  
                                      D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_12643  274  ATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  312
J  100.0% (52/52)   IGHJ2*01     15   .......................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_169741

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            254     1e-69
IGHD1-20*01                                                                                           18.0    0.64 
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD1-20*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	GAAACCGGATGTGGTGC	TAACTGGCACGA	AACGAGGTTACACGAAACGAGGTG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGTGAGAAACCGGATGTGGTGCTAACTGGCACGAAACGAGGTTACACGAAACGAGGTGACTGGTTCGACCCC	ACEKPDVVLTGTKRGYTKRGDWFDP	243	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	15	9	0	62.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	12	12	0	50
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	206	44	0	82.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  L  P  F  A  D  H  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12644  1    GGTCCCTGAGACTCTCCTGTGTAGGCTCTGGACTCCCCTTTGCTGACCATTACATGAGCTGGGTCCGCCAGGCTCCGGGGAAGGGACTGG  90
V  82.4% (206/250)  IGHV3-7*03   47   .....................C..C.......T..A.....AG.AG.T...GG.......................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  Q  I  P  P  G  G  P  D  A  Y  Y  A  E  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_12644  91   AGTGGGTGGCCCAAATTCCGCCCGGTGGACCTGATGCGTACTATGCGGAATCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  82.4% (206/250)  IGHV3-7*03   137  ...........A.C..AAA..AA.A....AG...GAAA.......T...C.......A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  K  S  V  H  L  Q  M  D  S  L  R  A  D  D  T  A  L  Y  R  C  A  C  E  K  P  D  V  V  L  
                    Query_12644  181  AGAAGTCAGTTCATCTGCAAATGGACAGCCTGAGAGCCGACGACACAGCCCTCTACCGCTGTGCGTGTGAGAAACCGGATGTGGTGCTAA  270
V  82.4% (206/250)  IGHV3-7*03   227  ....C...C.GT...........A................G.....G...G.G..TTA.......A.A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD1-20*01  5    ---------------------------------------------------------------------------------------...  7

                                      -----CDR3-IMGT-------------------------------->                                  
                                      T  G  T  K  R  G  Y  T  K  R  G  D  W  F  D  P  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_12644  271  CTGGCACGAAACGAGGTTACACGAAACGAGGTGACTGGTTCGACCCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  351
D  91.7% (11/12)    IGHD1-20*01  8    ....A....------------------------------------------------------------------------  16
J  97.9% (47/48)    IGHJ5*02     4    ---------------------------------..............................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_117787

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           360     1e-101
IGHD3-3*01                                                                                            41.1    7e-08 
IGHJ3*01                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ3*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAAGCGAAGTTCG	ATTACGATTTTTGGAGTGGTT	CACGTTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAAGCGAAGTTCGATTACGATTTTTGGAGTGGTTCACGTTTTGATGCTTTTGATGTC	AKDKAKFDYDFWSGSRFDAFDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  A  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  S  G  K  G  L  
                    Query_12645  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGCATTCACCTTTAGCAGTTATGCCATGAGCTGGGTCCGCCAGGCTTCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-23*01  47   ..............................G...............C...........................C...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  E  S  T  *  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12645  91   AGTGGGTCTCTGCTATTAGTGGTAGTGGTGAAAGCACATAATACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (240/250)  IGHV3-23*01  137  ..........A...................GT........C.................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  K  A  K  F  D  Y  
                    Query_12645  181  AGAACACGCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTATATTATTGTGCGAAAGATAAAGCGAAGTTCGATTACG  270
V  96.0% (240/250)  IGHV3-23*01  227  ............A.....................................G.......C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (21/21)   IGHD3-3*01   3    ------------------------------------------------------------------------------------......  8

                                      -CDR3-IMGT--------------------------->                                  
                                      D  F  W  S  G  S  R  F  D  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12645  271  ATTTTTGGAGTGGTTCACGTTTTGATGCTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  342
D  100.0% (21/21)   IGHD3-3*01   9    ...............---------------------------------------------------------  23
J  100.0% (50/50)   IGHJ3*01     1    ----------------------..................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_72952

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            353     9e-100
IGHD2-8*02                                                                                            19.9    0.15  
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AAAGCGGGCTC	TACTGGTGGT	A	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAAAGCGGGCTCTACTGGTGGTAACTTTGACTAC	ARKAGSTGGNFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  T  H  Y  W  M  S  W  V  R  Q  A  P  G  K  W  L  
                    Query_12646  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTTACTCACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGTGGCTGG  90
V  95.6% (237/248)  IGHV3-7*03   47   ....................................CC....G.AG.....................................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  D  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12646  91   AGTGGGTTGCCGACATAAAGCAGGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (237/248)  IGHV3-7*03   137  .......G...A..........A...................................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  K  A  G  S  T  G  G  
                    Query_12646  181  AGAACTCAGTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAAAAGCGGGCTCTACTGGTGGTA  270
V  95.6% (237/248)  IGHV3-7*03   227  ........C.G.........................................................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD2-8*02   10   -------------------------------------------------------------------------------..........-  19

                                      ---------->                                  
                                      N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12646  271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (45/45)   IGHJ4*02     4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_117786

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         352     3e-99
IGHD5-18*01                                                                                           25.7    0.003
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD5-18*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGGA	GGATACAGTTATGGTT	TGA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGGAGGATACAGTTATGGTTTGAACTGGCGCTTCGATCTC	ARVGGYSYGLNWRFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  A  F  N  T  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12647    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAATACGTACGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-30-3*01  47   ...................................A......G..GC..T........................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  D  G  S  D  K  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_12647    91   AGTGGGTGGCGGTTATCTCATATGATGGAAGCGACAAATACTACGCAGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAGACAATTCCA  180
V  95.2% (237/249)  IGHV3-30-3*01  137  ..........A.....A...............A.T..................................C....................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                        K  N  T  L  H  L  Q  T  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  G  Y  S  Y  G  
                    Query_12647    181  AGAACACGCTGCATCTGCAAACGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGAGTTGGAGGATACAGTTATGGTT  270
V  95.2% (237/249)  IGHV3-30-3*01  227  ...........T.........T...............................................---------------------  295
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.8% (15/16)    IGHD5-18*01    3    --------------------------------------------------------------------------........C.......  18

                                        T------------------>                                  
                                        L  N  W  R  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_12647    271  TGAACTGGCGCTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
J  96.1% (49/51)    IGHJ2*01       3    ---.....TA............................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_117785

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           366     2e-103
IGHD3-3*01                                                                                            43.0    2e-08 
IGHJ5*02                                                                                              58.4    9e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TCCA	TATTACGATTTTTGGAGTGGTT	CCCCAGGCCTCA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGATCCATATTACGATTTTTGGAGTGGTTCCCCAGGCCTCACC	TTDPYYDFWSGSPGLT	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	245	11	0	95.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12648  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAATGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.7% (245/256)  IGHV3-15*01  47   .......T......................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  N  R  T  D  G  G  T  A  A  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_12648  91   AGTGGGTTGGCCGTATTAAAAACAGAACTGATGGTGGGACAGCAGCATACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  95.7% (245/256)  IGHV3-15*01  137  .....................G..A................A...AC...........................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  R  N  T  V  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  D  P  Y  Y  D  
                    Query_12648  181  ATTCAAGAAACACGGTCTATTTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGATCCATATTACGATT  270
V  95.7% (245/256)  IGHV3-15*01  227  ......A.......C.G...C.......................................................--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (22/22)   IGHD3-3*01   2    --------------------------------------------------------------------------------..........  11

                                      R3-IMGT------------------>                                  
                                      F  W  S  G  S  P  G  L  T  W  G  Q  G  I  L  V  T  V  S  P  
                    Query_12648  271  TTTGGAGTGGTTCCCCAGGCCTCACCTGGGGCCAGGGAATCCTGGTCACCGTCTCCCCAG  330
D  100.0% (22/22)   IGHD3-3*01   12   ............------------------------------------------------  23
J  94.4% (34/36)    IGHJ5*02     16   ------------------------...............C................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_293088

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           350     8e-99
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	C	GGGACTTATGC	CAACTCGCCA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGACTTATGCCAACTCGCCATACTGGTACTTCGATCTC	ASGTYANSPYWYFDL	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_12649  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCGGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.2% (236/248)  IGHV4-39*02  49   ...................C...........G.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  T  G  S  A  Y  H  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_12649  91   CTGGAGTGGATTGCGAGTATCTATTATACTGGGAGCGCCTACCACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  95.2% (236/248)  IGHV4-39*02  139  .............G..............G.......A.....T...............................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       N  N  H  F  S  L  Q  L  S  S  V  T  D  A  D  T  A  V  Y  Y  C  A  S  G  T  Y  A  N  S  P 
                    Query_12649  181  AACAACCACTTCTCCCTGCAGCTGAGCTCTGTGACCGACGCAGACACGGCTGTCTATTACTGTGCGAGCGGGACTTATGCCAACTCGCCA  270
V  95.2% (236/248)  IGHV4-39*02  229  ..G...............A..................C...............G..............----------------------  296
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.9% (10/11)    IGHD3-16*01  20   ---------------------------------------------------------------------....G......----------  30

                                      ----------------->                                  
                                       Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_12649  271  TACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  322
J  100.0% (52/52)   IGHJ2*01     2    ....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_117784

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           313     2e-87
IGHD4-17*01                                                                                           19.9    0.17 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGCGGCAC	TGACTACATTGACTAC	GGGGAGGCCGCTCCACGGGAGGTG	GGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGACGGCGGCACTGACTACATTGACTACGGGGAGGCCGCTCCACGGGAGGTGGGTCTGGACGTC	VRDGGTDYIDYGEAAPREVGLDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  G  Y  A  I  H  W  V  R  R  A  P  G  K  G  L  
                    Query_12650  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAATGGCTATGCCATACACTGGGTCCGCCGGGCTCCAGGCAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-33*01  47   ..........................................G.A......G...G.............A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  V  D  G  V  N  Q  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_12650  91   AGTGGGTGGCCATTATTTGGGTTGATGGAGTTAATCAAAACTATGCTGACTCCGTGAAGGGCCGATTCACCGTTTCCAGAGACAATTCCA  180
V  90.0% (225/250)  IGHV3-33*01  137  ..........AG....A...TA.......AG....A..T.......A........................A.C................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  V  Y  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  V  R  D  G  G  T  D  Y  I  
                    Query_12650  181  AGAACACAGTGTATTTGCAAATGAACAGCCTGACGGCCGAAGACACGGCTGTCTATTACTGTGTGAGAGACGGCGGCACTGACTACATTG  270
V  90.0% (225/250)  IGHV3-33*01  227  .......GC.....C..................GA.....G...........G..........C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD4-17*01  1    -------------------------------------------------------------------------------.......GG..  11

                                      --CDR3-IMGT----------------------------->                                 
                                      D  Y  G  E  A  A  P  R  E  V  G  L  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_12650  271  ACTACGGGGAGGCCGCTCCACGGGAGGTGGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  344
D  87.5% (14/16)    IGHD4-17*01  12   .....---------------------------------------------------------------------  16
J  95.6% (43/45)    IGHJ6*02     18   -----------------------------...A..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_159044

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           311     5e-87
IGHD3-9*01                                                                                            44.9    5e-09
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	TCTCCGAAGCC	TATTACGATATTATGACTGATTATTATAA	GGGGGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CTCAGAGTCTCCGAAGCCTATTACGATATTATGACTGATTATTATAAGGGGGCTTTTGACTTC	LRVSEAYYDIMTDYYKGAFDF	240	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	10	1	0	90.9
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	125	24	20	4	0	83.3
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	4	3	0	57.1
Total	N/A	N/A	231	215	16	0	93.1


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  V  P  G  K  G  L  A  W  V  S  R  I  
                    Query_12651  16   GTACAGCCTCTGGATTCACCTTTAGTACCTACTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGGCTGGCTTGGGTCTCACGTATCA  105
V  93.1% (215/231)  IGHV3-74*01  65   ..G...................C....G..........................C.................TG..............T.  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  D  G  S  K  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  
                    Query_12651  106  GTAGTGATGGGAGTAAGACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGCTCTATCTGC  195
V  93.1% (215/231)  IGHV3-74*01  155  A..............GC....G............................................................G.......  244
                                      N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------------------CDR3-IMGT----------
                                      Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  L  R  V  S  E  A  Y  Y  D  I  M  T  D  Y  Y  
                    Query_12651  196  AAATGAACAGTCTGAGAGACGAGGACACGGCTGTGTATTACTGTCTCAGAGTCTCCGAAGCCTATTACGATATTATGACTGATTATTATA  285
V  93.1% (215/231)  IGHV3-74*01  245  ..................C.........................GCA....---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  93.1% (27/29)    IGHD3-9*01   2    --------------------------------------------------------------............T......G........  29

                                      ---------------->                                  
                                      K  G  A  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12651  286  AGGGGGCTTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  93.1% (27/29)    IGHD3-9*01   30   .--------------------------------------------------  30
J  97.7% (42/43)    IGHJ4*02     6    --------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_117783

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12652  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  I  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12652  91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACATCCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ........GT........T.......G.............A.................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_12652  181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.1% (233/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12652  271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_117782

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            396     2e-112
IGHD6-6*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	72	3	0	96
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	100	14	0	87.7
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	274	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  R  A  S  G  Y  S  F  S 
                    Query_12653  2    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAGGGCTTCTGGATACAGCTTCAGC  91
V  92.9% (274/295)  IGHV1-8*02   1    ...G...................G...........................................A..............C.....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 
                    Query_12653  92   AGCTATGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTAT  181
V  92.9% (274/295)  IGHV1-8*02   91   .............A.........................................................C..................  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D 
                    Query_12653  182  GCACAGAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGAC  271
V  92.9% (274/295)  IGHV1-8*02   181  ............C............C.......A..A...C.T....A..................C..........G.GAT....G...  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12653  272  ACGGCCGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  92.9% (274/295)  IGHV1-8*02   271  ........G................---------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01   9    ------------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02     9    ------------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_254291

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           367     6e-104
IGHD3-16*01                                                                                           14.1    9.3   
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	GGGGGA	TTTGGGG	ACTAC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGCGAGGGGGATTTGGGGACTACTTCGACCCC	TRGGFGDYFDP	292	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	70	4	0	94.6
CDR1-IMGT	79	102	24	17	7	0	70.8
FR2-IMGT	103	153	51	45	6	0	88.2
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	105	9	0	92.1
CDR3-IMGT (germline)	292	297	6	4	2	0	66.7
Total	N/A	N/A	293	264	29	0	90.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  V  T  G  H  N  L  S  
                    Query_12654  5    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGTGAGTCTCTGAAGATCTCCTGTAAGGTCACTGGACACAACTTAAGCA  94
V  90.1% (264/293)  IGHV5-51*01  2    ...........................................G.........................GTT.....T...G...T.C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  V  W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  F  I  Y  L  G  D  S  D  T  K  Y  
                    Query_12654  95   GTGTCTGGATCACCTGGGTGCGCCAGATGCCCGGAAAAGGCCTGGAGTGGATTGGATTCATCTATCTTGGTGACTCTGATACCAAATACA  184
V  90.1% (264/293)  IGHV5-51*01  92   .CTA.......GG.....................G.................G..GA.........C.................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  M  S  A  D  N  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_12654  185  GCCCGTCCTTTCAAGGCCAGGTCACCATGTCAGCCGACAACTCCATCAACACCGCCTACTTGCAGTGGAGTAGCCTGAAGGCCTCGGACA  274
V  90.1% (264/293)  IGHV5-51*01  182  ..........C.................C...........G.......G..........C..........C...................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------CDR3-IMGT----------->                                  
                                      T  A  M  Y  F  C  T  R  G  G  F  G  D  Y  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12654  275  CCGCCATGTATTTTTGTACGCGAGGGGGATTTGGGGACTACTTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  358
V  90.1% (264/293)  IGHV5-51*01  272  ............AC...G..A..-------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                              
D  100.0% (7/7)     IGHD3-16*01  15   -----------------------------.......------------------------------------------------  21
J  97.7% (42/43)    IGHJ5*02     9    -----------------------------------------.......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_254290

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           346     2e-97
IGHD3-16*01                                                                                           18.0    0.64 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	278	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	277	114	95	13	6	83.3
CDR3-IMGT (germline)	278	283	6	6	0	0	100
Total	N/A	N/A	289	257	26	6	88.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P  R  Y
                    Query_12655  1    GCAGCTGGTGCAGTCTGGAGCGGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCCGTTA  90
V  88.9% (257/289)  IGHV5-51*03  6    .....................A.................................T.....A....T..........GC..TA..A.C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_12655  91   TTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGTCC  180
V  88.9% (257/289)  IGHV5-51*03  96   C........C.......................................................G.....................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D  T  A
                    Query_12655  181  GGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACACTGC  264
V  88.9% (257/289)  IGHV5-51*03  186  .T.....C.A...................C...C........CAGCACC.C...............C..C.................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12655  265  CATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  353
V  88.9% (257/289)  IGHV5-51*03  276  ...G........T......----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD3-16*01  18   --------------------........T...---------------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    ---------------------------------------......T......G.................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_117780

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.043
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACCCCCTTTTGACTAC	ARDPAVVVQWVAGTGPPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12656  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12656  91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_12656  181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  P  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12656  271  GGGTGGCTGGTACAGGACCCCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_323933

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           318     6e-89
IGHD2-2*01                                                                                            23.8    0.011
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-2*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TATT	TAGTACCAGCTG	GAACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTATTTAGTACCAGCTGGAACGACTACGGTTTGGACGTC	REYLVPAGTTTVWTS	242	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	29	28	0	1	96.6
CDR1-IMGT	29	52	24	20	4	0	83.3
FR2-IMGT	53	103	51	51	0	0	100
CDR2-IMGT	104	127	24	17	7	0	70.8
FR3-IMGT	128	241	114	105	9	0	92.1
CDR3-IMGT (germline)	242	248	7	7	0	0	100
Total	N/A	N/A	249	228	20	1	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L   N  S  P  V  Q  P  L  D  S  P  S  L  I  M  K  *  T  G  S  A  R  L  Q  G  R  G  W 
                    Query_12657  1    GGTCCCTGA-ACTCTCCTGTGCAGCCTCTGGATTCTCCTTCACTGATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  89
V  91.6% (228/249)  IGHV3-48*03  47   .........G.........................A......G.AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       S  G  F  H  T  L  V  A  V  V  I  P  H  T  T  R  P  L  L  R  A  D  S  P  S  P  E  T  A  P 
                    Query_12657  90   AGTGGGTTTCATACATTAGTCGCGGTGGTCATTCCACACACTACGCGACCTCTGTTAAGGGCCGATTCACCATCTCCAGAGACAGCGCCA  179
V  91.6% (228/249)  IGHV3-48*03  137  ....................A.TA.....AG.A...T.T.......AGA......G............................A.....  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                       R  T  H  S  I  C  K  *  T  A  *  E  S  R  T  R  L  F  I  T  V  R  E  Y  L  V  P  A  G  T 
                    Query_12657  180  AGAACTCACTCTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTCTTTATTACTGTGCGAGAGTATTTAGTACCAGCTGGAACG  269
V  91.6% (228/249)  IGHV3-48*03  227  ..........G.........................C.............G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD2-2*01   13   -------------------------------------------------------------------------............-----  24

                                      ---------------->                                 
                                       T  T  V  W  T  S  G  A  *  E  P  R  S  P  S  P   
                    Query_12657  270  ACTACGGTTTGGACGTCTGGGGCCTAGGAACCACGGTCACCGTCTCCTCA  319
J  94.0% (47/50)    IGHJ6*02     13   ........A...............A...G.....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_323932

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD6-25*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAGG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTC	ARQSSAGRTRYGMDV	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	279	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  
                    Query_12658  3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATTCGACTTTACCG  92
V  94.6% (279/295)  IGHV5-51*01  2    ........................................C.............................T.......A.AG.......A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  V  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_12658  93   ACTACTGGATCGTCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACGAGATACA  182
V  94.6% (279/295)  IGHV5-51*01  92   G...........G..............T......................................................C.......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  G  L  K  A  S  D  
                    Query_12658  183  GTCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACA  272
V  94.6% (279/295)  IGHV5-51*01  182  .C...............................C.............A.......................A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  F  C  A  R  Q  S  S  A  G  R  T  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_12658  273  CCGCCATGTATTTTTGTGCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCT  362
V  94.6% (279/295)  IGHV5-51*01  272  ............AC...........-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD6-25*01  7    --------------------------.......---------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -----------------------------------------------...........................................  57

                                           
                                      S  S 
                    Query_12658  363  CGTCA  367
J  97.9% (47/48)    IGHJ6*02     58   .C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_303177

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*02                                                                                           364     5e-103
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ3*01                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*02	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTAGAGCT	TTACTCTGGTTCGGGGAG	GGAAAGC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTAGAGCTTTACTCTGGTTCGGGGAGGGAAAGCATGCTTTTGATTTG	AKVRALLWFGEGKHAFDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  S  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12659  1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCAGCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTCG  90
V  96.8% (241/249)  IGHV3-30*02  47   ....................G...............C........G.......................................G..G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12659  91   AGTGGGTGGCACTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.8% (241/249)  IGHV3-30*02  137  ...........T.....C........................................................................  226
                                      E  W  V  A  F  I  R  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  P  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  V  R  A  L  L  W  F  
                    Query_12659  181  AGAACACGCCGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGTTAGAGCTTTACTCTGGTTCG  270
V  96.8% (241/249)  IGHV3-30*02  227  .........T...........................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  94.4% (17/18)    IGHD3-10*01  4    -----------------------------------------------------------------------------.....A.......  16

                                      IMGT--------------------->                                  
                                      G  E  G  K  H  A  F  D  L  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_12659  271  GGGAGGGAAAGCATGCTTTTGATTTGTGGGGCCAAGGGACAAGGGTCACCGTCTCTTCAG  330
D  94.4% (17/18)    IGHD3-10*01  17   .....-------------------------------------------------------  21
J  93.8% (45/48)    IGHJ3*01     3    ------------...........G.C................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_303176

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           299     2e-83
IGHD3-16*01                                                                                           12.2    31   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGG	TGGGGG	GGCCCCGGTAT	TACGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGGTGGGGGGGCCCCGGTATTACGCTATGGACGTC	AREGVGGPRYYAMDV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	218	27	0	89


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  M  S  D  F  Y  W  S  W  L  R  Q  P  P  G  K  A  L  E 
                    Query_12660  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGCTTCCATGAGTGACTTCTACTGGAGTTGGCTCCGGCAGCCCCCAGGGAAGGCACTGGAG  90
V  89.0% (218/245)  IGHV4-59*01  49   ..................A............GC.....C...AGT.A.........C...A.....................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  T  N  H  N  P  S  L  R  N  R  V  T  I  S  V  D  R  P  K  N 
                    Query_12660  91   TGGATTGGGTACATCTATTACACTGGGAGTACCAACCACAATCCCTCCCTCAGGAATCGAGTCACCATTTCAGTAGACAGGCCCAAGAAC  180
V  89.0% (218/245)  IGHV4-59*01  139  ...........T..........G......C......T....C..........A..G............A..........C.T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  E  G  V  G  G  P  R  Y  Y 
                    Query_12660  181  CAGTTCTCCCTGAAGTTGACTTCTGTGACCGCTGCGGACACGGCCATATATTATTGTGCGAGAGAGGGGGTGGGGGGGCCCCGGTATTAC  270
V  89.0% (218/245)  IGHV4-59*01  229  ...............C...GC........................G.G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------......--------------  22
J  97.9% (47/48)    IGHJ6*02     15   ---------------------------------------------------------------------------------------...  17

                                      ----------->                                 
                                       A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12660  271  GCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  315
J  97.9% (47/48)    IGHJ6*02     18   .G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_309076

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           286     1e-79
IGHD6-19*01                                                                                           35.3    4e-06
IGHJ3*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-19*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTGGGAAACC	GGGTATAGCACTGGCTGGTAC	GACCG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTGGGAAACCGGGTATAGCACTGGCTGGTACGACCGTTTTGATCTT	ARDWETGYSTGWYDRFDL	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	20	4	0	83.3
FR2-IMGT	49	99	51	49	2	0	96.1
CDR2-IMGT	100	123	24	14	10	0	58.3
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	233	208	25	0	89.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  L  S  G  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  I  S  Y  I 
                    Query_12661  13   TGTGCAGCCTCTGGATTCACCCTCAGCGGATATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAATGGATTTCATACATC  102
V  89.3% (208/233)  IGHV3-48*03  64   .....................T....TA.T............................................G...G..........T  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  A  A  V  T  R  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  N  N  A  L  Y  L 
                    Query_12661  103  AGTAGTGCCGCTGTCACCAGGCACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCAACAACGCACTGTATCTG  192
V  89.3% (208/233)  IGHV3-48*03  154  ......AGT.G.AGT....TAT...............................................G....G...T...........  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------------------CDR3-IMGT-------------
                                       Q  M  H  S  L  R  P  E  D  A  A  V  Y  Y  C  A  R  D  W  E  T  G  Y  S  T  G  W  Y  D  R 
                    Query_12661  193  CAAATGCACAGCCTGCGACCCGAGGACGCGGCTGTTTATTATTGTGCGAGAGATTGGGAAACCGGGTATAGCACTGGCTGGTACGACCGT  282
V  89.3% (208/233)  IGHV3-48*03  244  ......A........A..G........A.............C...........-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  95.2% (20/21)    IGHD6-19*01  1    ---------------------------------------------------------------..........G..........------  21
J  88.6% (39/44)    IGHJ3*01     7    -----------------------------------------------------------------------------------------.  7

                                      -------->                                  
                                       F  D  L  W  G  Q  G  T  T  V  T  V  S  A  
                    Query_12661  283  TTTGATCTTTGGGGCCAGGGGACAACGGTCACCGTCTCTGCAG  325
J  88.6% (39/44)    IGHJ3*01     8    ......G.C........A.......T.............T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_303173

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           319     2e-89
IGHD6-6*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12662  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (226/248)  IGHV3-21*01  47   ............................T............AG...C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  G  
                    Query_12662  91   AGTGGGTCTCATCCATCAGTAGTAGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  91.1% (226/248)  IGHV3-21*01  137  ................T........T...AGT......T.C..C..A......G..A..............................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_12662  181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  91.1% (226/248)  IGHV3-21*01  227  ....C..................AA...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12662  271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_303172

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            357     1e-100
IGHD1-1*01                                                                                            14.1    8.0   
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-1*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACTAAAACAAGAC	CTGGGACGAC	G	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACTAAAACAAGACCTGGGACGACG	ARDTKTRPGTT	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	111	3	0	97.4
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  I  Y  Y  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_12663  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTATTTACTACTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  96.0% (238/248)  IGHV4-4*02   49   ..............................................G.A...GG....G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  T  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_12663  91   GAGTGGATTGGGGAAATCTATCATAGTGGGACCGCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  96.0% (238/248)  IGHV4-4*02   139  ...............................G.A........................................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  *  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  K  T  R  P  G  T 
                    Query_12663  181  AACCAGTTCTCCCTGTAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATACTAAAACAAGACCTGGGACG  270
V  96.0% (238/248)  IGHV4-4*02   229  ...............A.G....G.............................................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  90.0% (9/10)     IGHD1-1*01   8    ----------------------------------------------------------------------------------....A...  15

                                      -->                                  
                                       T  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12663  271  ACGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
D  90.0% (9/10)     IGHD1-1*01   16   ..-----------------------------------  17
J  100.0% (34/34)   IGHJ4*02     15   ---..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_303171

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            325     3e-91
IGHD1-26*01                                                                                           12.2    32   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGTTTC	TATAGT	CGCGTTGGCTGCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTTTCTATAGTCGCGTTGGCTGCTTCTTTGACTAC	ARCFYSRVGCFFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  E  F  T  F  S  T  Y  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12664  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGAATTCACCTTTAGTACCTACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (228/248)  IGHV3-7*01   47   .....................C........G..............G...T.GG.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  R  H  D  E  T  V  K  T  Y  V  D  S  V  K  G  R  F  T  T  S  R  D  N  A  
                    Query_12664  91   AGTGGGTGGCAAACATAAGGCACGATGAAACTGTGAAAACCTATGTGGACTCTGTGAAGGGCCGATTCACCACGTCCAGAGACAACGCCA  180
V  91.9% (228/248)  IGHV3-7*01   137  ..........C.......A...A....G..G..A....TA................................TC................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  C  F  Y  S  R  V  G  
                    Query_12664  181  AGAACTCACTGTATCTGCAAATGGATAGCCTGAGACCTGAGGACACGGCTGTGTATTACTGTGCGAGATGTTTCTATAGTCGCGTTGGCT  270
V  91.9% (228/248)  IGHV3-7*01   227  .......................A.C.........G.C..............................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------......----------  8

                                      ------------->                                  
                                      C  F  F  D  Y  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_12664  271  GCTTCTTTGACTACTGGGGCCAGGGAGTGTTGGTCACCGTCTCCTCAG  318
J  90.9% (40/44)    IGHJ4*02     5    ----......................ACCC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_303170

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           382     3e-108
IGHD3-10*01                                                                                           18.0    0.59  
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTAT	CAATTAGACT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATCAATTAGACTACTACTTTGACTAC	ARGLYYYQLDYYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12665  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (247/250)  IGHV4-31*03  49   .........................................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12665  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (247/250)  IGHV4-31*03  139  ..........................................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  R  F  S  L  K  P  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  Q  L 
                    Query_12665  181  AAGAACCGGTTCTCCCTGAAGCCGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCTCTATTACTATCAATTA  270
V  98.8% (247/250)  IGHV4-31*03  229  .......A..............T...............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-10*01  2    ---------------------------------------------------------------------------.........------  10

                                      ----------------->                                  
                                       D  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12665  271  GACTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  100.0% (48/48)   IGHJ4*02     1    ----................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_294604

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            420     7e-120
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	27	0	0	100
FR3-IMGT	159	272	114	113	1	0	99.1
CDR3-IMGT (germline)	273	279	7	7	0	0	100
Total	N/A	N/A	279	274	5	0	98.2


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  
                    Query_12666  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGA  90
V  98.2% (274/279)  IGHV6-1*01   26   ...........................................................G......G....AG.................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_12666  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAA  180
V  98.2% (274/279)  IGHV6-1*01   116  ..........................................................................................  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_12666  181  GTCGAATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  98.2% (274/279)  IGHV6-1*01   206  ..............A...........................................................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------CDR3-IMGT--------->                                  
                                      C  A  R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12666  271  GTGCAAGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
V  98.2% (274/279)  IGHV6-1*01   296  .........---------------------------------------------------------  304
                                      C  A  R                                                           
J  97.9% (46/47)    IGHJ3*02     4    -------------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_254297

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           349     2e-98
IGHD4-17*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GCCA	TGACTACGGTGAC	AACGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGCCATGACTACGGTGACAACGCCTTTGCTTAC	AKGHDYGDNAFAY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12667  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-23*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  N  I  G  G  T  G  G  N  R  V  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_12667  91   AGTGGGTCTCAAATATTGGAGGTACTGGTGGTAACAGAGTCTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  94.8% (236/249)  IGHV3-23*01  137  ...........GC....A.T....G........G..C.TA...............................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  H  D  Y  G  D  N  
                    Query_12667  181  AGAACACGCTCTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAAGGCCATGACTACGGTGACAACG  270
V  94.8% (236/249)  IGHV3-23*01  227  ..........G.........................................A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (13/13)   IGHD4-17*01  1    -------------------------------------------------------------------------.............----  13

                                      ---------->                                  
                                      A  F  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12667  271  CCTTTGCTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  95.5% (42/44)    IGHJ4*02     5    -.....AC.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_151672

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD2-21*01                                                                                           10.3    122   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TGTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTGTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFVQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12668  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTTCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (240/248)  IGHV4-31*03  49   ...............................G..C......C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12668  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCT  180
V  96.8% (240/248)  IGHV4-31*03  139  ..................................G.............C......................C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  V  Q  E 
                    Query_12668  181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTTCTCTATTTGTCCAAGAA  270
V  96.8% (240/248)  IGHV4-31*03  229  ..........................C.........................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD2-21*01  22   ---------------------------------------------------------------------------.....----------  26

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_12668  271  AGAGTCTACTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.9% (47/48)    IGHJ4*02     1    -------.....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_85513

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           249     2e-68
IGHD3-16*01                                                                                           12.2    29   
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD3-16*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TATTG	CACAGGGGCTTCAG	GTTATG	GA	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGGGCTTCAGGTTATGGATGGCTCGACCCC	RGFRLWMARP	231	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	17	7	0	70.8
FR2-IMGT	41	91	51	48	3	0	94.1
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	99	14	1	86.8
Total	N/A	N/A	217	190	26	1	87.6


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  L  T  M  S  D  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D
                    Query_12669  13   GTCTGGACTCACAATGAGTGACTACGGCATGCATTGGGTCCGCCAGGCTCCAGGCAAGGGACTGGAATGGGTGGCAGTTATATGGTATGA  102
V  87.6% (190/217)  IGHV3-33*03  72   .......T....CT.C...AG...T........C..........................G.....G.......................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  I  K  K  I  L  C  R  F  R  E  G  P  I  H  H  F  *  R  R  L  Q  E  H  P  I  S  A  N  G
                    Query_12669  103  TGGAATTAAAAAAATTCTATGCAGATTCCGTGAAGGGCCGATTCACCATTTCTAGAGACGACTCCAAGAACACCCTATTTCTGCAAATGG  192
V  87.6% (190/217)  IGHV3-33*03  162  .....G...T...-.A.........C.......................C..C......A.............G..G.A..........A  250
                                        G  S  N  K   Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  

                                      -------------------------------------><-----------CDR3-IMGT----------->                   
                                        Q  S  E  S  R  R  H  G  S  I  L  L  H  R  G  F  R  L  W  M  A  R  P  L  G  P  G  S  P  G
                    Query_12669  193  ACAGTCTGAGAGCCGACGACACGGCTCTATATTATTGCACAGGGGCTTCAGGTTATGGATGGCTCGACCCCTGGGGCCAGGGAGCCCTGG  282
V  87.6% (190/217)  IGHV3-33*03  251  ....C...........G.........G.G.....C..-----------------------------------------------------  287
                                      N  S  L  R  A  E  D  T  A  V  Y  Y                                                        
D  100.0% (6/6)     IGHD3-16*01  24   ---------------------------------------------------......---------------------------------  29
J  95.7% (44/46)    IGHJ5*02     6    -----------------------------------------------------------...T....................A......  36

                                                     
                                        H  R  L  L   
                    Query_12669  283  TCACCGTCTCCTCAG  297
J  95.7% (44/46)    IGHJ5*02     37   ...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_121832

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         347     7e-98
IGHD1-26*01                                                                                           10.3    124  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ACCTCTTGGGCGAAAGGGATAG	GTGGG	TGGGT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACCTCTTGGGCGAAAGGGATAGGTGGGTGGGTCTGGTTCGCCCCC	ARTSWAKGIGGWVWFAP	246	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  V  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_12670    4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  94.8% (235/248)  IGHV4-30-4*01  50   .....TCC...A.....A............G.................A.........................................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  C  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_12670    94   TGGAGTGGATTGGGTGCATCTATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCA  183
V  94.8% (235/248)  IGHV4-30-4*01  140  ...............A........................C.................................................  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                        K  N  Q  F  S  L  K  M  T  S  V  I  A  A  D  T  A  A  Y  Y  C  A  R  T  S  W  A  K  G  I  
                    Query_12670    184  AGAACCAGTTCTCCCTGAAGATGACCTCTGTGATTGCCGCAGACACGGCCGCGTATTACTGTGCCAGAACCTCTTGGGCGAAAGGGATAG  273
V  94.8% (235/248)  IGHV4-30-4*01  230  ....................C...G........C.................T................----------------------  297
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       

                                        GT-------------------->                                  
                                        G  G  W  V  W  F  A  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_12670    274  GTGGGTGGGTCTGGTTCGCCCCCTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  330
D  100.0% (5/5)     IGHD1-26*01    7    .....----------------------------------------------------  11
J  95.7% (45/47)    IGHJ5*02       5    ----------........A..........................C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_37009

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            414     5e-118
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CACA	TACTATCCTTCGGGGAGTT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATACTATCCTTCGGGGAGTTTACTACGGTATGGACGTC	ARAHTILRGVYYGMDV	273	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	30	0	0	100
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	24	3	0	88.9
FR3-IMGT	159	272	114	112	2	0	98.2
CDR3-IMGT (germline)	273	279	7	6	1	0	85.7
Total	N/A	N/A	279	272	7	0	97.5


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  M  S  G  D  S  V  S  S  N  S  A  A  W  N  W  
                    Query_12671  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATGTCCGGGGACAGTGTCTCTAGCAACAGTGCTGCTTGGAACTGGA  90
V  97.5% (272/279)  IGHV6-1*01   26   ..............................................C...........................................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  R  W  Y  T  D  Y  A  V  S  V  K  
                    Query_12671  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCGAGGTGGTATACTGATTATGCAGTCTCTGTGAAAA  180
V  97.5% (272/279)  IGHV6-1*01   116  .......................................................C.A........A............A..........  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_12671  181  GTCGAATAACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTCTATTACT  270
V  97.5% (272/279)  IGHV6-1*01   206  ..................................................................................G.......  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-------------------CDR3-IMGT------------------>                                 
                                      C  A  R  A  H  T  I  L  R  G  V  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12671  271  GTGCGAGAGCACATACTATCCTTCGGGGAGTTTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  353
V  97.5% (272/279)  IGHV6-1*01   296  ....A....--------------------------------------------------------------------------  304
                                      C  A  R                                                                            
D  89.5% (17/19)    IGHD3-10*01  5    -------------......GG...........---------------------------------------------------  23
J  100.0% (51/51)   IGHJ6*02     12   --------------------------------...................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_72957

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            403     9e-115
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	269	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	154	27	27	0	0	100
FR3-IMGT	155	268	114	113	1	0	99.1
CDR3-IMGT (germline)	269	275	7	7	0	0	100
Total	N/A	N/A	274	266	8	0	97.1


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  I  R 
                    Query_12672  2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGATCAGG  91
V  97.1% (266/274)  IGHV6-1*01   31   ........G...T.G.......................................G......G....AG......................  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 
                    Query_12672  92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGA  181
V  97.1% (266/274)  IGHV6-1*01   121  ..........................................................................................  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_12672  182  ATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCA  271
V  97.1% (266/274)  IGHV6-1*01   211  .........A................................................................................  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------CDR3-IMGT--------->                                  
                                       R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12672  272  AGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  332
V  97.1% (266/274)  IGHV6-1*01   301  ....---------------------------------------------------------  304
                                       R                                                           
J  97.9% (46/47)    IGHJ3*02     4    --------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_110250

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           343     2e-96
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGAGGAG	TATTGTAATAGTA	AAGGCTGCTTTCCGTC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGAGGAGTATTGTAATAGTAAAGGCTGCTTTCCGTCCTGGTTCGACCCC	ARAEEYCNSKGCFPSWFDP	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  N  M  I  W  I  R  Q  A  P  G  K  G  L  
                    Query_12673  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAATATGATCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-21*01  47   ............................................AG.....GC....A....G...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  C  I  S  S  S  S  N  Y  I  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12673  91   AGTGGGTCTCATGCATTAGTAGTAGTAGTAATTACATATACTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (234/249)  IGHV3-21*01  137  ............C.................G......................G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  A  G  I  Y  Y  C  A  R  A  E  E  Y  C  N  S  
                    Query_12673  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACGCGGGTATATATTACTGCGCGAGAGCGGAGGAGTATTGTAATAGTA  270
V  94.0% (234/249)  IGHV3-21*01  227  ........................................G...A...C.G.G........T.......---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD2-2*01   5    -----------------------------------------------------------------------------.......G.....  17

                                      -IMGT----------------------->                                  
                                      K  G  C  F  P  S  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12673  271  AAGGCTGCTTTCCGTCCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
J  100.0% (47/47)   IGHJ5*02     5    ----------------...............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_307512

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           445     2e-127
IGHJ5*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	N/A	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TCAGGGATCGCATCTAGGA	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGATCGCATCTAGGATGGTTCGACCCC	ARDQGSHLGWFDP	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	288	3	0	99


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_12674  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  99.0% (288/291)  IGHV1-69*01  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q
                    Query_12674  91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACA  180
V  99.0% (288/291)  IGHV1-69*01  96   ..........................................................................................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  I  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_12674  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCATAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  99.0% (288/291)  IGHV1-69*01  186  ...............................................C..........................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  D  Q  G  S  H  L  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12674  271  CGTCTATTACTGTGCGAGAGATCAGGGATCGCATCTAGGATGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  99.0% (288/291)  IGHV1-69*01  276  ...G.................-----------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                    
J  100.0% (46/46)   IGHJ5*02     6    ----------------------------------------..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_110251

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           288     5e-80
IGHD2-15*01                                                                                           14.1    8.6  
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGGGGATTTCGAGAA	GGTGGTA	AATCGGTCAGTTCTGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGGGGATTTCGAGAAGGTGGTAAATCGGTCAGTTCTGCCTAC	ARDGGFREGGKSVSSAY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  S  T  Y  T  M  N  W  L  R  Q  A  P  G  K  E  P  
                    Query_12675  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGGTTCAGTACTTATACTATGAACTGGCTTCGCCAGGCTCCAGGGAAGGAGCCGC  90
V  86.8% (217/250)  IGHV3-21*01  47   ....................................CC.......GC....GC.........G.C...................G..T.G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  S  V  S  G  D  G  T  C  I  Y  Y  A  E  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12675  91   AATGGGTCGCATCTGTGAGTGGAGATGGAACCTGCATATACTACGCAGAATCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  86.8% (217/250)  IGHV3-21*01  137  .G......T....CA.T...A.TAG.A.T.GT.A...............C...G...................................A  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      E  N  S  V  F  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  G  G  F  R  E  G  
                    Query_12675  181  AGAACTCAGTGTTTCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCTGTCTATTATTGTGCGAGAGACGGGGGATTTCGAGAAGGTG  270
V  86.8% (217/250)  IGHV3-21*01  227  ........C...A.......................C...............G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-15*01  14   --------------------------------------------------------------------------------------....  17

                                      GT-------------------->                                  
                                      G  K  S  V  S  S  A  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_12675  271  GTAAATCGGTCAGTTCTGCCTACTGGGGCCAGGGAACCCTTGTCATCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD2-15*01  18   ...------------------------------------------------------  20
J  94.7% (36/38)    IGHJ4*02     11   -------------------.....................G....C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_56698

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            329     3e-92
IGHD3-3*01                                                                                            37.2    1e-06
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGCGACGTCCGGGTCC	TACGATTTTTGGAGTGGTT	CTGGTACTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGCGACGTCCGGGTCCTACGATTTTTGGAGTGGTTCTGGTACTCTTGACTAC	AREATSGSYDFWSGSGTLDY	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  T  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12676  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTAGTGGTACCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  90
V  92.3% (229/248)  IGHV4-4*02   49   ..................G...................C..C...A...A..............................G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  H  S  G  S  T  K  Y  N  T  S  L  R  S  R  V  T  I  S  V  D  R  S  N 
                    Query_12676  91   GAGTGGATTGGAGAAATCTCTCATAGTGGGAGCACCAAGTACAACACGTCCCTCAGGAGTCGAGTCACCATATCAGTAGACAGGTCGAAC  180
V  92.3% (229/248)  IGHV4-4*02   139  ...........G.......A..................C......C.........A..........................A...C..G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------------CDR3
                                       K  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  T  S  G  S  Y  D 
                    Query_12676  181  AAGCAGTTCTCCCTGAGATTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGAGGCGACGTCCGGGTCCTACGAT  270
V  92.3% (229/248)  IGHV4-4*02   229  ..C.............AGC...G.............................................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (19/19)   IGHD3-3*01   5    ------------------------------------------------------------------------------------......  10

                                      -IMGT------------------------>                                  
                                       F  W  S  G  S  G  T  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_12676  271  TTTTGGAGTGGTTCTGGTACTCTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  334
D  100.0% (19/19)   IGHD3-3*01   11   .............---------------------------------------------------  23
J  97.6% (41/42)    IGHJ4*02     7    ----------------------.....................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_56699

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           290     2e-80
IGHD1-26*01                                                                                           10.3    117  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TATTG	CACA	GGAGC	ATCAGGTGAGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGGTGAGGGGTGGTTCGACCCC	TGASGEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	241	113	101	12	0	89.4
Total	N/A	N/A	241	213	28	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  E  V  T  F  R  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12677  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGAAGTTACCTTCAGAAATTATGGGATGCACTGGGTCCGCCAGGCCCCAGGCAAGGGACTGG  90
V  88.4% (213/241)  IGHV3-33*03  47   ..............................G.T.C........T.GC.....C....................T...........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  S  I  K  T  F  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  D  S  
                    Query_12677  91   AATGGGTGGCAGTTATTTGGTATGATTCAATTAAGACATTCTATGCGGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACGACTCCA  180
V  88.4% (213/241)  IGHV3-33*03  137  .G..............A.........GG..G...T.A..A......A..........A.........................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      R  N  T  L  F  L  Q  M  N  S  L  R  A  D  D  T  A  L  Y  Y  C  T  G  A  S  G  E  G  W  F  
                    Query_12677  181  GGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGACGACACGGCTCTTTATTATTGCACAGGAGCATCAGGTGAGGGGTGGTTCG  270
V  88.4% (213/241)  IGHV3-33*03  227  A......G....A......A....................G.........G.G.....C..-----------------------------  287
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                
D  100.0% (5/5)     IGHD1-26*01  10   -----------------------------------------------------------------.....--------------------  14
J  97.8% (45/46)    IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_12677  271  ACCCCTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  309
J  97.8% (45/46)    IGHJ5*02     13   .....................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_144961

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           346     2e-97
IGHD2-21*01                                                                                           16.1    2.5  
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TATTTGGGAAGATGGTTA	TGGTGGTAATT	CCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATATTTGGGAAGATGGTTATGGTGGTAATTCCCACTACTTTGACCAC	VRDIWEDGYGGNSHYFDH	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	256	35	0	88


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  S  T  N  Y
                    Query_12678  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGGCACCTCGACAAACTA  90
V  88.0% (256/291)  IGHV1-69*06  6    ..................G...............................................T.............TC.GC.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  T  F  Q  T  G  N  T  A  Q
                    Query_12678  91   CGCCATAAGTTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAATGGATGGGAGGAATCATCCCTACTTTTCAAACAGGAAATACCGCACA  180
V  88.0% (256/291)  IGHV1-69*06  96   T..T..C..C.......................A........G...........G..........TC...GGT....C...CTA......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  M  T  A  D  T  S  T  S  T  A  F  M  E  L  S  S  L  T  S  D  D  T  A
                    Query_12678  181  GAGATTCCAGGGCAGAGTCACGATGACCGCGGACACATCCACGAGTACAGCTTTCATGGAGTTGAGCAGCCTGACATCTGACGACACGGC  270
V  88.0% (256/291)  IGHV1-69*06  186  ..AG....................T..........A.........C.....C.A.......C............G......G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  V  R  D  I  W  E  D  G  Y  G  G  N  S  H  Y  F  D  H  W  G  P  G  T  L  V  T
                    Query_12678  271  CGTGTATTATTGTGTGAGAGATATTTGGGAAGATGGTTATGGTGGTAATTCCCACTACTTTGACCACTGGGGCCCGGGAACCCTAGTCAC  360
V  88.0% (256/291)  IGHV1-69*06  276  .........C....C......---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  90.9% (10/11)    IGHD2-21*01  10   ---------------------------------------.......G...----------------------------------------  20
J  93.5% (43/46)    IGHJ4*02     1    -----------------------------------------------------...........T.........A.........G.....  37

                                               
                                        V  S  S
                    Query_12678  361  CGTCTCCTC  369
J  93.5% (43/46)    IGHJ4*02     38   .........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_110253

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           357     1e-100
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12679  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (238/248)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_12679  91   CTCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  96.0% (238/248)  IGHV4-31*03  139  ..G...............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G 
                    Query_12679  181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGGCCACTCCTATGGTTCGGGG  270
V  96.0% (238/248)  IGHV4-31*03  229  .........................G................................A.........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12679  271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_144967

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           318     5e-89
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ1*01                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD4-17*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGA	TACGGTGA	GGGGACTTAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGATACGGTGAGGGGACTTAT	ARDRYGEGTY	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  V  A  S  S  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_12680  1    GGTCCCTGAGACTCTCCTGTGCAGCTTCTGGCCTCGTGGCCAGTAGTAACTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (225/247)  IGHV3-53*01  47   .........................C.....GT..ACC.T......C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  H  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  K  
                    Query_12680  91   AGTGGGTCTCAGTTATTTATCACGGTGGTAGCACATATTACGCAGACTCCGTAAAGGGCCGATTCACCATCTCCAGAGACGACTCTAAGA  180
V  91.1% (225/247)  IGHV3-53*01  137  ....................AG...............C..............G...........................A.T..C....  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------CDR3-IMGT---------> 
                                      N  T  L  Y  L  Q  M  N  N  L  K  V  D  D  T  A  V  Y  Y  C  A  R  D  R  Y  G  E  G  T  Y  
                    Query_12680  181  ATACACTGTATCTTCAAATGAACAACCTGAAAGTCGACGACACGGCCGTGTATTACTGTGCGAGAGATCGATACGGTGAGGGGACTTATT  270
V  91.1% (225/247)  IGHV3-53*01  227  .C..G...................G.....G..C...G.............................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD4-17*01  5    -----------------------------------------------------------------------........-----------  12
J  94.1% (32/34)    IGHJ1*01     19   -----------------------------------------------------------------------------------------.  19

                                                                       
                                      W  G  K  G  T  L  V  T  V  S  S  
                    Query_12680  271  GGGGCAAGGGCACCCTGGTCACCGTCTCGTCAG  303
J  94.1% (32/34)    IGHJ1*01     20   .....C......................C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_144966

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           427     1e-121
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTC	ARHGDDSGGYLYYLYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	282	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_12681  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCACCTA  90
V  96.9% (282/291)  IGHV5-51*01  6    ..............................A...................A...................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  T  R  Y  S  P
                    Query_12681  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.9% (282/291)  IGHV5-51*01  96   ........G.................................................T...............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  A
                    Query_12681  181  GTCCTTCGAAGGCCAGGTCACCATCTCCGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACCCCGC  270
V  96.9% (282/291)  IGHV5-51*01  186  .......C...................A.C.......................................................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  H  G  D  D  S  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_12681  271  CATGTATTACTGTGCGAGACATGGGGATGATAGTGGGGGCTACCTTTACTACTTGTACGGAATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  96.9% (282/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------........A.....-----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    ----------------------------------------------.......AC.....T.............................  49

                                                   
                                        T  V  S  S 
                    Query_12681  361  CACCGTCTCCTCA  373
J  94.7% (54/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_144965

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           442     2e-126
IGHD6-13*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	TCAC	ATAGCAGCAGCTGGT	CGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGATCACATAGCAGCAGCTGGTCGGGCTTTGACTAC	RDHIAAAGRALTT	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	76	74	73	0	1	98.6
CDR1-IMGT	77	100	24	24	0	0	100
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	113	1	0	99.1
CDR3-IMGT (germline)	290	295	6	5	1	0	83.3
Total	N/A	N/A	293	290	2	1	99


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K   S  R  G  S  L  *  R  S  P  V  R  V  L  D  T  A  L  P 
                    Query_12682  4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAA-GCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  92
V  99.0% (290/293)  IGHV5-51*03  2    ....................................A.....................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                       A  T  G  S  A  G  C  A  R  C  P  G  K  A  W  S  G  W  G  S  S  I  L  V  T  L  I  P  D  T 
                    Query_12682  93   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  182
V  99.0% (290/293)  IGHV5-51*03  92   ..........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                       A  R  P  S  K  A  R  S  P  S  Q  P  T  S  P  S  A  P  P  T  C  S  G  A  A  *  R  P  R  T 
                    Query_12682  183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  99.0% (290/293)  IGHV5-51*03  182  ..........................................................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                       P  P  C  I  T  G  R  D  H  I  A  A  A  G  R  A  L  T  T  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_12682  273  CCGCCATGTATTACTGGGCGGGATCACATAGCAGCAGCTGGTCGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  362
V  99.0% (290/293)  IGHV5-51*03  272  ................T...A..-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)   IGHD6-13*01  5    ---------------------------...............------------------------------------------------  19
J  100.0% (44/44)   IGHJ4*02     5    ----------------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_56691

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           277     9e-77
IGHD3-22*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAC	ATAGTACTGG	CCGAATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATAGTACTGGCCGAATCATTGACTAT	ARAHSTGRIIDY	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	22	8	0	73.3
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	100	14	0	87.7
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	213	36	0	85.5


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G  
                    Query_12683  4    CCCTGAGACTCTCCTGCAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCAGGGAAGGGCC  93
V  85.5% (213/249)  IGHV4-31*01  50   .....TCC...A......C................A...G.A....TGG..A...C....G.............CA..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  M  G  Y  I  Y  H  V  E  S  T  S  R  N  P  S  L  K  S  Q  L  T  I  S  L  D  P  S  
                    Query_12683  94   TGGAGTGGATGGGATACATCTATCACGTTGAGAGCACCTCCCGCAACCCGTCCCTCAAGAGTCAACTTACCATTTCACTCGACCCGTCTA  183
V  85.5% (213/249)  IGHV4-31*01  140  ..........T..G.........T..AG..G........A.TA....................T.G.......A...G.A...A......  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  S  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  S  T  G  R  I  
                    Query_12683  184  AGAGCCAGTTCTCCCTAAAACTGACCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCACATAGTACTGGCCGAATCA  273
V  85.5% (213/249)  IGHV4-31*01  230  ...A............G..G....G....G.......................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-22*01  12   ------------------------------------------------------------------------......G...--------  21

                                      ------->                                  
                                      I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12683  274  TTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ4*02     7    .......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_56692

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           402     3e-114
IGHD2-21*01                                                                                           18.0    0.69  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	G	ATTGCGGTGGTG	TAGTGATGGAACTTGTTACTCTGGTTCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTAT	ARRLRWCSDGTCYSGSFEY	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	69	2	0	97.2
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	291	274	17	0	94.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  K  F  T  S  
                    Query_12684  5    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAAGTTTACCAGCT  94
V  94.2% (274/291)  IGHV5-51*01  5    ...............................A........G.....................................GC..........  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  F  P  R  D  S  D  T  R  Y  N  
                    Query_12684  95   ATTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTCGTGACTCCGATACCAGATATAACC  184
V  94.2% (274/291)  IGHV5-51*01  95   .C......................T...........................G.......A....G.......T...........C.G..  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  D  Q  V  T  I  S  A  D  A  S  I  S  T  A  Y  L  Q  W  D  S  L  K  A  S  D  T  
                    Query_12684  185  CGTCCTTCCAAGACCAGGTCACCATCTCAGCCGACGCGTCCATCAGCACCGCCTACCTGCAGTGGGACAGCCTGAAGGCCTCGGACACCG  274
V  94.2% (274/291)  IGHV5-51*01  185  ............G......................AA............................AG.......................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------------CDR3-IMGT----------------------->                   
                                      A  M  Y  Y  C  A  R  R  L  R  W  C  S  D  G  T  C  Y  S  G  S  F  E  Y  W  G  Q  G  T  L  
                    Query_12684  275  CCATGTATTACTGTGCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTATTGGGGCCAGGGAACCCTGG  364
V  94.2% (274/291)  IGHV5-51*01  275  .....................---------------------------------------------------------------------  295
                                      A  M  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD2-21*01  6    ----------------------....T.......--------------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    --------------------------------------------------------------.....C..C...................  33

                                                     
                                      V  T  V  S  S  
                    Query_12684  365  TCACCGTCTCCTCAG  379
J  95.3% (41/43)    IGHJ4*02     34   ...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_144968

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           413     2e-117
IGHD1-20*01                                                                                           29.5    2e-04 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-20*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGAAAA	TATAACTGGAACGAC	GGAAT	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATC	ARVGKYNWNDGIAFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  N  S  F
                    Query_12685  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCTTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAACAGCTT  90
V  95.5% (277/290)  IGHV1-69*01  6    ..................G.......................C........................................G.....A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  N  W  V  R  Q  A  P  G  H  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  K  Y  A  Q
                    Query_12685  91   TGCTGTCAACTGGGTGCGACAGGCCCCTGGACATGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAACAAAATACGCACA  180
V  95.5% (277/290)  IGHV1-69*01  96   ....A...G........................A..........................................G....C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  R  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_12685  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGGACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.5% (277/290)  IGHV1-69*01  186  .............................................C....C.......................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  V  G  K  Y  N  W  N  D  G  I  A  F  D  I  W  G  Q  G  T  I  V  T  V  S
                    Query_12685  271  CGTTTATTATTGTGCGAGAGTAGGAAAATATAACTGGAACGACGGAATTGCCTTTGATATCTGGGGCCAAGGGACAATAGTCACCGTCTC  360
V  95.5% (277/290)  IGHV1-69*01  276  ...G.....C..........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (15/15)   IGHD1-20*01  3    ----------------------------...............-----------------------------------------------  17
J  95.7% (45/47)    IGHJ3*02     4    ------------------------------------------------...T..........................G...........  45

                                           
                                        S  
                    Query_12685  361  TTCAG  365
J  95.7% (45/47)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_56694

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           361     4e-102
IGHD3-22*01                                                                                           48.8    3e-10 
IGHJ2*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGAC	GTATTACTATGATAGTAGTGGTTAT	GCCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGACGTATTACTATGATAGTAGTGGTTATGCCCACTGGCACTTCGATCTC	ARATYYYDSSGYAHWHFDL	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  V  T  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12686  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCGTCACTAGTTATGAAATGAACTGGGTCCGGCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-48*03  47   ....................................C.T...G........................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  S  S  G  S  T  T  Y  Y  G  D  S  V  K  G  R  V  T  I  S  R  D  N  A  
                    Query_12686  91   AGTGGGTGTCACACATTAGTAGTAGTGGTAGTACCACATACTACGGAGACTCTGTGAAGGGCCGAGTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (240/249)  IGHV3-48*03  137  .......T...T........................T........C...................T........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  T  Y  Y  Y  D  S  
                    Query_12686  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGCGACGTATTACTATGATAGTA  270
V  96.4% (240/249)  IGHV3-48*03  227  .....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (25/25)   IGHD3-22*01  1    -------------------------------------------------------------------------.................  17

                                      -IMGT----------------------->                                  
                                      S  G  Y  A  H  W  H  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_12686  271  GTGGTTATGCCCACTGGCACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  333
D  100.0% (25/25)   IGHD3-22*01  18   ........-------------------------------------------------------  25
J  98.0% (50/51)    IGHJ2*01     3    ------------.....T.............................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_56696

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           330     1e-92
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGCCGG	TGGTTCGGGGAGTTATTA	CAGAGGA	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGCCGGTGGTTCGGGGAGTTATTACAGAGGATTCGACCCC	ARDAGGSGSYYRGFDP	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	231	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12687  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGTTCCATCAGCAGCGGTTCTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  92.0% (231/251)  IGHV4-31*03  49   ................................C...........T...GG............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  P  S  Y  Y  N  P  S  L  R  S  R  L  A  I  S  V  D  T  S 
                    Query_12687  91   CTGGAGTGGATTGGGTACATCCATCACAGTGGGCCCAGCTACTACAACCCGTCCCTCAGGAGTCGACTTGCGATATCAGTAGACACGTCT  180
V  92.0% (231/251)  IGHV4-31*03  139  .....................T..T........AG..C....................A.......G..A.C..................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  E  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  A  G  G  S  G  S 
                    Query_12687  181  AAGAATGAACTCTCCCTGAAGCTGACCTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGAGACGCCGGTGGTTCGGGGAGT  270
V  92.0% (231/251)  IGHV4-31*03  229  .....CC.GT...............G..............................T..............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (18/18)   IGHD3-10*01  10   -----------------------------------------------------------------------------.............  22

                                      GT------------------>                                  
                                       Y  Y  R  G  F  D  P  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_12687  271  TATTACAGAGGATTCGACCCCTGGGGTCAGGGAGTCCTGGTCACCGTCTCCTCAG  325
D  100.0% (18/18)   IGHD3-10*01  23   .....--------------------------------------------------  27
J  93.0% (40/43)    IGHJ5*02     9    ------------..............C......AC....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_168956

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           344     6e-97
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_12688  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.4% (234/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  G  T  S 
                    Query_12688  91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGGCACGTCC  180
V  94.4% (234/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C....A.......  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_12688  181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.4% (234/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_12688  271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_88051

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           321     6e-90
IGHD3-3*01                                                                                            12.2    31   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAGTGG	CAAGTAGGG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGAGTGGCAAGTAGGGGGTTCGACCCC	VRGVASRGFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  F  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12689  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCAGCTACTTTATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGACTCG  90
V  91.2% (227/249)  IGHV3-74*01  47   ...........................................T.......GG................................G..G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  A  R  I  R  S  D  G  T  T  T  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  V  
                    Query_12689  91   TGTGGGTCGCACGTATTCGGAGTGATGGGACTACCACAGCCTACGCGGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAACGTCA  180
V  91.2% (227/249)  IGHV3-74*01  137  ........T........AAT..........G..G....AG........................A......................C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  S  T  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  V  R  G  V  A  S  R  G  F  
                    Query_12689  181  AGAGCACACTGTATCTGGAAATGAACAGTCTGAGAGTCGAGGACACGGCTGTGTATTATTGTGTGAGAGGAGTGGCAAGTAGGGGGTTCG  270
V  91.2% (227/249)  IGHV3-74*01  227  ...A...G.........C..................C.....................C....CA....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-3*01   16   ---------------------------------------------------------------------......---------------  21
J  97.8% (44/45)    IGHJ5*02     7    ------------------------------------------------------------------------------------......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_12689  271  ACCCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  309
J  97.8% (44/45)    IGHJ5*02     13   ..........................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_88050

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ATTTCT	TATGGTTCGGGGAGT	CACGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAATTTCTTATGGTTCGGGGAGTCACGGGTGGTTCGACCCC	ARISYGSGSHGWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  K  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12690  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAAATACTTCTGGAGTTGGATCCGTCAGCCCCCCGGGAAGGGCCTGGAG  90
V  90.9% (221/243)  IGHV4-59*01  49   ...............................G.........T.GT....A......C........G........A........A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  I  G  T  T  S  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12690  91   TGGATTGGTTACATCTATTACATTGGGACCACCAGCTACAACCCCTCCCTCGAGAGTCGCGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  90.9% (221/243)  IGHV4-59*01  139  ........G..T..........G.....G.....A................A.......A..............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  R  A  M  Y  Y  C  A  R  I  S  Y  G  S  G  S  H  G 
                    Query_12690  181  CAGTTCTCCCTGAAGCTAACGTCTGTGACCGCTGCGGACAGGGCCATGTATTACTGTGCGCGAATTTCTTATGGTTCGGGGAGTCACGGG  270
V  90.9% (221/243)  IGHV4-59*01  229  .................G.GC...................C....G..............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (15/15)   IGHD3-10*01  8    ---------------------------------------------------------------------...............------  22

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12690  271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (46/46)   IGHJ5*02     6    ..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_88055

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD2-21*01                                                                                           21.8    0.043
IGHJ3*01                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-21*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCGGCTCC	GCATCTTGTGGTGG	GGAAAACTCCTCGTCATGTTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATCCGGCTCCGCATCTTGTGGTGGGGAAAACTCCTCGTCATGTTCTTGATGTC	VRDPAPHLVVGKTPRHVLDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  R  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12691  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCAGCTATAGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ...........................................T........C................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  N  S  N  G  N  N  I  K  Y  A  D  S  M  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12691  91   AGTGGGTCTCCTCCATTAATAGTAACGGAAATAATATAAAGTACGCAGACTCAATGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ..........A.......G.....GTA.T.G.T.C...T.C............G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  L  N  S  L  R  A  E  D  T  G  V  Y  Y  C  V  R  D  P  A  P  H  L  V  
                    Query_12691  181  AGAACTCACTGTATCTGCAACTGAACAGCCTGAGAGCCGAGGACACGGGTGTTTATTACTGTGTGAGAGATCCGGCTCCGCATCTTGTGG  270
V  92.4% (231/250)  IGHV3-21*01  227  ....................A...........................C...G..........C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.9% (13/14)    IGHD2-21*01  2    -------------------------------------------------------------------------------....A......  12

                                      R3-IMGT------------------------>                                
                                      V  G  K  T  P  R  H  V  L  D  V  W  G  Q  G  T  M  V  S  V  S  S
                    Query_12691  271  TGGGGAAAACTCCTCGTCATGTTCTTGATGTCTGGGGCCAAGGGACAATGGTCAGCGTCTCTTC  334
D  92.9% (13/14)    IGHD2-21*01  13   ...-------------------------------------------------------------  15
J  97.5% (39/40)    IGHJ3*01     9    ------------------------..............................C.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_88054

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD3-9*01                                                                                            16.1    2.6   
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGAAGGATTCCT	ATATTTTG	GGGAATCGTCATCTC	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGAAGGATTCCTATATTTTGGGGAATCGTCATCTCACGGTATGGACGTC	ARQEGFLYFGESSSHGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  T  F  T  K  Y
                    Query_12692  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGGTCTGGATACACCTTTACCAAATA  90
V  94.8% (276/291)  IGHV5-51*01  6    ....................................C........................A....T..........G........GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  M  E  W  M  G  I  I  S  P  G  D  S  N  T  R  Y  S  P
                    Query_12692  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGCAAAGGCATGGAGTGGATGGGAATCATCTCTCCTGGTGACTCTAATACCAGATACAGCCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ..............................G......C.............G.......A.............G................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  V  K  A  S  D  S  A
                    Query_12692  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCGTGAAGGCCTCGGACAGCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  ............................................G.........................C...............C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  F  Y  C  A  R  Q  E  G  F  L  Y  F  G  E  S  S  S  H  G  M  D  V  W  G  Q  G  T  S  V
                    Query_12692  271  CATGTTTTACTGTGCGAGACAAGAAGGATTCCTATATTTTGGGGAATCGTCATCTCACGGTATGGACGTCTGGGGCCAAGGGACCTCTGT  360
V  94.8% (276/291)  IGHV5-51*01  276  .....A...............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-9*01   9    ---------------------------------........-------------------------------------------------  16
J  95.7% (45/47)    IGHJ6*02     16   --------------------------------------------------------.............................A.G..  49

                                                   
                                        T  V  S  S 
                    Query_12692  361  CACCGTCTCCTCA  373
J  95.7% (45/47)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_88057

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           262     4e-72
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GACTAGTGA	GATAGTAGTG	CTTGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGACTAGTGAGATAGTAGTGCTTGGTGCTTTCGATATG	ARETSEIVVLGAFDM	227	271	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	17	7	0	70.8
FR2-IMGT	41	91	51	47	4	0	92.2
CDR2-IMGT	92	112	21	14	7	0	66.7
FR3-IMGT	113	226	114	105	9	0	92.1
CDR3-IMGT (germline)	227	234	8	8	0	0	100
Total	N/A	N/A	221	194	27	0	87.8


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-----CDR2-I
                                       S  G  D  S  I  R  S  H  S  W  S  W  I  R  Q  P  P  G  K  G  M  E  W  I  G  N  V  E  Y  R 
                    Query_12693  14   TCTGGAGACTCCATCAGAAGTCATTCGTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGAATGGAGTGGATTGGAAATGTCGAATACAGG  103
V  87.8% (194/221)  IGHV4-59*01  73   .....T.G.........T...T.C.AC.......................A.........C.............GT..A..T.T.....T  162
                                       S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S 

                                      MGT-----><----------------------------------------------------FR3-IMGT--------------------
                                       G  G  S  N  Y  N  P  S  L  N  S  R  L  T  I  S  V  D  M  S  K  N  Q  F  S  L  K  L  S  S 
                    Query_12693  104  GGAGGCTCCAACTACAACCCCTCCCTCAACAGTCGACTCACCATATCAGTGGACATGTCCAAGAATCAGTTCTCCCTGAAGCTGAGCAGT  193
V  87.8% (194/221)  IGHV4-59*01  163  ..GA..A......................G......G.............A....C.........C.....................TC.  252
                                       G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S 

                                      --------------------------------><-----------------CDR3-IMGT----------------->            
                                       V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  T  S  E  I  V  V  L  G  A  F  D  M  W  G  Q  G 
                    Query_12693  194  GTGACCGCGGCGGACACGGCCGTCTATTACTGTGCGAGAGAGACTAGTGAGATAGTAGTGCTTGGTGCTTTCGATATGTGGGGCCAAGGG  283
V  87.8% (194/221)  IGHV4-59*01  253  ........T..............G.................-------------------------------------------------  293
                                       V  T  A  A  D  T  A  V  Y  Y  C  A  R                                                    
D  100.0% (10/10)   IGHD3-22*01  11   --------------------------------------------------..........------------------------------  20
J  95.6% (43/45)    IGHJ3*02     4    -----------------------------------------------------------------......T.....C............  28

                                                          
                                       T  M  V  T  V  S  S
                    Query_12693  284  ACAATGGTCACCGTCTCTTC  303
J  95.6% (43/45)    IGHJ3*02     29   ....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_88056

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	AGDLGFNDYGEDALDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q 
                    Query_12694  1    ACCCTGTCCCTCACCTGCACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAA  90
V  90.6% (222/245)  IGHV4-59*01  49   ....................T..........................C........C............C.................G.G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_12694  91   TGGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  ...A....G.....C...T....T....G......C..............C...........C.C.........A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  D  L  G  F  N  D  Y  G  E 
                    Query_12694  181  CAGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGGGAGATCTTGGGTTTAATGACTACGGTGAG  270
V  90.6% (222/245)  IGHV4-59*01  229  ...T.........AG..G.G........................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD4-17*01  1    -----------------------------------------------------------------------------............-  12

                                      -------------->                                  
                                       D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_12694  271  GATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  319
J  92.5% (37/40)    IGHJ4*02     9    ---------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_88059

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            386     1e-109
IGHD3-3*01                                                                                            18.0    0.66  
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	CGGAAAGAGCGGACTCA	ATTTTTGGA	ATCATTGTGCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGCGGAAAGAGCGGACTCAATTTTTGGAATCATTGTGCCTTTTGACTAC	VRAERADSIFGIIVPFDY	273	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	25	2	0	92.6
FR3-IMGT	159	272	114	104	10	0	91.2
CDR3-IMGT (germline)	273	279	7	5	2	0	71.4
Total	N/A	N/A	279	263	16	0	94.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  D  R  A  A  W  N  W  
                    Query_12695  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTGTCTCTAGCGACCGTGCTGCTTGGAACTGGA  90
V  94.3% (263/279)  IGHV6-1*01   26   ....................................................................A..A..................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  Y  D  Y  A  V  S  V  K  
                    Query_12695  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATATTACAGGTCCAAGTGGTATTATGATTATGCAGTATCTGTGAAGA  180
V  94.3% (263/279)  IGHV6-1*01   116  ..............................................C..................A......................A.  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  M  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  K  S  V  T  P  D  D  T  A  V  Y  Y  
                    Query_12695  181  GTCGAATGACCATCAATCCAGACACATCCAAGAACCAATTTTCTCTGCAGTTGAAGTCTGTGACTCCCGACGACACGGCTGTCTATTACT  270
V  94.3% (263/279)  IGHV6-1*01   206  .......A........C....................G..C..C......C....C..............G...........G.......  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------------------CDR3-IMGT--------------------->                                  
                                      C  V  R  A  E  R  A  D  S  I  F  G  I  I  V  P  F  D  Y  W  D  Q  G  T  L  V  T  V  S  S  
                    Query_12695  271  GTGTCAGAGCGGAAAGAGCGGACTCAATTTTTGGAATCATTGTGCCTTTTGACTACTGGGACCAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  94.3% (263/279)  IGHV6-1*01   296  ...CA....---------------------------------------------------------------------------------  304
                                      C  A  R                                                                                   
D  100.0% (9/9)     IGHD3-3*01   9    --------------------------.........-------------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    -----------------------------------------------.............G.............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_88058

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            382     4e-108
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTATTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12696  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_12696  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  98.8% (247/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  H  C  A  R  E  K  T  A  A  V  V  
                    Query_12696  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATCACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  98.8% (247/250)  IGHV3-7*01   227  ........................................................T.............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12696  271  TTGACTATTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  94.9% (56/59)    IGHJ6*02     4    ---....C..C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_168957

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         299     2e-83
IGHD3-10*01                                                                                           27.6    7e-04
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGCTCGGC	GGTTCGGGGAGTTA	CC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTCGGCGGTTCGGGGAGTTACCACTAC	ARGLGGSGSYHY	230	265	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	234	5	5	0	0	100
Total	N/A	N/A	221	206	15	0	93.2


Alignments

                                        <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                         S  G  V  A  F  S  S  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  S  H  D 
                    Query_12697    14   TCTGGAGTCGCCTTCAGCAGCTATGCTATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCACTTATATCACATGAT  103
V  93.2% (206/221)  IGHV3-30-3*01  73   ......T..A.......T...........G.............................................G........T.....  162
                                         S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D 

                                        -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                         G  S  S  K  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  V  Y  L  Q  M  N 
                    Query_12697    104  GGAAGCAGTAAATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGGTATATCTACAGATGAAC  193
V  93.2% (206/221)  IGHV3-30-3*01  163  .......A........A.......................................................C.G.....G..A......  252
                                         G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                        -----------------------------------><-------------CDR3-IMGT------------>                  
                                         S  L  R  N  E  D  T  A  V  Y  Y  C  A  R  G  L  G  G  S  G  S  Y  H  Y  W  G  Q  G  T  L 
                    Query_12697    194  AGCCTGAGAAATGAGGACACGGCTGTTTATTACTGTGCGAGGGGGCTCGGCGGTTCGGGGAGTTACCACTACTGGGGCCAGGGAACCCTG  283
V  93.2% (206/221)  IGHV3-30-3*01  253  .........GC...............G..............-------------------------------------------------  293
                                         S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                    
D  100.0% (14/14)   IGHD3-10*01    11   ---------------------------------------------------..............-------------------------  24
J  97.3% (36/37)    IGHJ4*02       10   -------------------------------------------------------------------.......................  32

                                                      
                                         V  A  V  S  S
                    Query_12697    284  GTCGCCGTCTCCTC  297
J  97.3% (36/37)    IGHJ4*02       33   ...A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_152228

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            339     2e-95
IGHD6-6*01                                                                                            19.9    0.15 
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-6*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	GGCTATTT	TAGGAGCTCGTCC	TGGGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATGGCTATTTTAGGAGCTCGTCCTGGGGCTGGTTCGACCCC	AKDGYFRSSSWGWFDP	239	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	24	0	0	100
FR2-IMGT	50	100	51	48	3	0	94.1
CDR2-IMGT	101	124	24	23	1	0	95.8
FR3-IMGT	125	238	114	110	4	0	96.5
CDR3-IMGT (germline)	239	247	9	9	0	0	100
Total	N/A	N/A	233	225	8	0	96.6


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  
                    Query_12698  15   GTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGGAGTGGGTCTCTTATATTA  104
V  96.6% (225/233)  IGHV3-9*01   65   ..................................................................................AGG.....  154
                                         A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  W  N  S  G  S  I  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  K  N  S  L  Y  L  
                    Query_12698  105  GTTGGAATAGTGGTAGTATAGACTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCAAGAACTCCCTGTATCTGC  194
V  96.6% (225/233)  IGHV3-9*01   155  ................C....G..............................................G.....................  244
                                      S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  N  S  L  R  P  E  D  T  A  L  Y  F  C  A  K  D  G  Y  F  R  S  S  S  W  G  W  F  D  
                    Query_12698  195  AAATGAACAGTCTGAGACCTGAGGACACGGCCTTGTATTTCTGTGCAAAAGATGGCTATTTTAGGAGCTCGTCCTGGGGCTGGTTCGACC  284
V  96.6% (225/233)  IGHV3-9*01   245  .................G.....................A.............-------------------------------------  297
                                      Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                                      
D  92.3% (12/13)    IGHD6-6*01   6    -------------------------------------------------------------...C.........----------------  18
J  100.0% (47/47)   IGHJ5*02     5    -------------------------------------------------------------------------------...........  15

                                      ->                                  
                                      P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12698  285  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  320
J  100.0% (47/47)   IGHJ5*02     16   ....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_237843

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD6-19*01                                                                                           14.1    8.5  
IGHJ5*02                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AACGTT	CAGTGGC	CATTAGAGGGCGT	CAACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAACGTTCAGTGGCCATTAGAGGGCGTCAACGGGTTTGACCAC	AKNVQWPLEGVNGFDH	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  A  Y  A  M  S  W  V  R  Q  A  P  G  M  G  L  
                    Query_12699  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTTAGTGCCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGATGGGGCTGG  90
V  94.4% (234/248)  IGHV3-23*01  47   ...................................A.......CAG............C......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  Y  G  D  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12699  91   AGTGGGTCTCAGCTATTAGTGGTTATGGTGATAAAACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (234/248)  IGHV3-23*01  137  .......................AG.....G..GC.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  N  V  Q  W  P  L  E  
                    Query_12699  181  AGAGCACGCTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAAACGTTCAGTGGCCATTAGAGG  270
V  94.4% (234/248)  IGHV3-23*01  227  ...A........A......A................................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD6-19*01  9    --------------------------------------------------------------------------.......---------  15

                                      T------------------>                                  
                                      G  V  N  G  F  D  H  W  G  R  G  S  L  V  T  A  S  S  
                    Query_12699  271  GCGTCAACGGGTTTGACCACTGGGGCCGGGGAAGCCTGGTTACCGCCTCCTCAG  324
J  86.0% (43/50)    IGHJ5*02     2    ----....T....C....C........A.....C......C....T........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_36094

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           385     4e-109
IGHD1-26*01                                                                                           18.0    0.57  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGG	ATAGTGGGGGCT	N/A	ACTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGGATAGTGGGGGCTACTGCTTTGACTAC	ARDLDSGGYCFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	248	2	0	99.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12700  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.2% (248/250)  IGHV3-48*03  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  I  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12700  91   AGTGGGTTTCATACATTAGTAGTAGTGGTAGTATCATATACTACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  99.2% (248/250)  IGHV3-48*03  137  .................................C..............................A.........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  D  S  G  G  Y  
                    Query_12700  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATCTGGATAGTGGGGGCTACT  270
V  99.2% (248/250)  IGHV3-48*03  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD1-26*01  4    ---------------------------------------------------------------------------........A...---  15
J  95.7% (45/47)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                 
                                      C  F  D  Y  W  G  Q  G  T  L  V  T  V  P  S 
                    Query_12700  271  GCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCA  314
J  95.7% (45/47)    IGHJ4*02     4    A.....................................T.....  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_215356

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         353     9e-100
IGHD3-22*01                                                                                           16.1    2.2   
IGHJ3*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAG	TTACTTTGATA	CTGGGGGAC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAGTTACTTTGATACTGGGGGACATGCTTTTGATATC	ARDSYFDTGGHAFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12701    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACATTCAGTACCTATGGTATTCACTGGGTCCGCCAGGCCCCCGGCAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-30-3*01  47   .....................................C.......G.....C...G.................T..A.............  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  T  S  
                    Query_12701    91   AGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGGAGGGCCGATTCACCATATCCAGAGACACTTCCA  180
V  95.2% (238/250)  IGHV3-30-3*01  137  ........................................................A................C..........A.....  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        K  N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  Y  F  D  T  G  
                    Query_12701    181  AGAACACGGTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACAGCTGTGTATTATTGTGCGAGAGACAGTTACTTTGATACTGGGG  270
V  95.2% (238/250)  IGHV3-30-3*01  227  ........C.....................................G...........C...........--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD3-22*01    4    -------------------------------------------------------------------------.....A.....------  14

                                        ---------------->                                  
                                        G  H  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12701    271  GACATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  100.0% (48/48)   IGHJ3*02       3    ---................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_215355

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           37.2    9e-07
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCTT	CTATGATAGCAGTGGTTATTAC	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCTTCTATGATAGCAGTGGTTATTACCACTTTGACTAT	VVFYDSSGYYHFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	238	1	1	0	0	100
Total	N/A	N/A	238	226	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  A  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12702  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGCCGCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.0% (226/238)  IGHV4-59*01  49   .......................C.......G.T........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12702  91   TGGATTGGTTATATCTATCACAGTGGGACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.0% (226/238)  IGHV4-59*01  139  ........G.........T.........G...............C.............................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  F  Y  D  S  S  G  Y  Y  H 
                    Query_12702  181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGTGGTCTTCTATGATAGCAGTGGTTATTACCAC  270
V  95.0% (226/238)  IGHV4-59*01  229  ...................GC..........................G..T.......--------------------------------  286
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                                  
D  95.5% (21/22)    IGHD3-22*01  7    -----------------------------------------------------------------.........T............---  28
J  95.6% (43/45)    IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_12702  271  TTTGACTATTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  313
J  95.6% (43/45)    IGHJ4*02     6    ........C.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_215354

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           308     4e-86
IGHD3-16*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	GGTGGAAATTA	TTTGGGG	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGTGGAAATTATTTGGGGGGTATGGACGTC	AGGNYLGGMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	221	24	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  Y  Y  T  M  Y  W  V  R  Q  V  P  G  R  G  L  
                    Query_12703  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTTGATTATTATACCATGTACTGGGTCCGTCAAGTTCCGGGGAGGGGTCTGG  90
V  90.2% (221/245)  IGHV3-43*01  47   .....................................C......G...........C...............C........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  I  S  W  D  G  E  T  T  D  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  T  G  
                    Query_12703  91   AGTGGGTCTCTCTTATTAGTTGGGATGGTGAGACTACAGACTATGGAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACACCGGCA  180
V  90.2% (221/245)  IGHV3-43*01  137  ..............................GT.GC...T......C.................................A....A.A...  226
                                      E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  R  S  L  F  L  Q  M  N  S  L  I  S  E  D  T  A  L  Y  F  C  A  G  G  N  Y  L  G  G  M  
                    Query_12703  181  AAAGGTCCCTCTTTCTGCAGATGAACAGTCTGATAAGTGAAGACACCGCCTTATATTTCTGTGCAGGTGGAAATTATTTGGGGGGTATGG  270
V  90.2% (221/245)  IGHV3-43*01  227  ...AC.....G.A......A.............G..C...G...........G....A.......-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  15   ----------------------------------------------------------------------------.......-------  21
J  95.6% (43/45)    IGHJ6*02     18   -----------------------------------------------------------------------------------.......  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_12703  271  ACGTCTGGGGCCAAGGGACAATGGTCACCGTCTCCTCA  308
J  95.6% (43/45)    IGHJ6*02     25   ...................C.C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_215353

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           350     8e-99
IGHD6-13*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGT	GGTATAGCAGCA	CCCTTAAA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGTGGTATAGCAGCACCCTTAAATACTTTGACTAC	ARVWYSSTLKYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  I  S  G  T  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12704  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCATCAGTGGTACTCACTATTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*03  49   ........................................G.......GG.T....C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  I  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12704  91   CTGGAGTGGATTGGCTACATTTATTATAGTGGGATCACCTACTACAATCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*03  139  ..............G.....C.....C.......G............C..........................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  L  T  A  A  D  T  A  V  Y  F  C  A  R  V  W  Y  S  S  T  L 
                    Query_12704  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCCCTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGTGTGGTATAGCAGCACCCTT  270
V  94.8% (237/250)  IGHV4-31*03  229  .............................TG...........................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD6-13*01  2    -------------------------------------------------------------------------............-----  13

                                      -------------->                                  
                                       K  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12704  271  AAATACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (46/46)   IGHJ4*02     3    ---..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_338397

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           358     4e-101
IGHD2-8*01                                                                                            41.1    7e-08 
IGHJ2*01                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD2-8*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	CGTACG	AGGATTTTGTACTAATGGTGTTTGCTTTAC	GGGG	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACCGTACGAGGATTTTGTACTAATGGTGTTTGCTTTACGGGGTGGTACTTCGATCTC	TTVRGFCTNGVCFTGWYFDL	249	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	241	12	0	95.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  N  N  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_12705  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACTTTCAATAATGCCTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.3% (241/253)  IGHV3-15*01  47   .......T............G.....................G...C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  *  V  G  R  I  K  S  K  I  D  G  G  A  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_12705  91   AGTGAGTTGGTCGTATTAAAAGCAAAATTGATGGTGGGGCAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  95.3% (241/253)  IGHV3-15*01  137  ....G.....C................C..........A...................................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  D  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  V  R  G  F  C  
                    Query_12705  181  ATTCAAAAGATACGCTCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACCGTACGAGGATTTTGTA  270
V  95.3% (241/253)  IGHV3-15*01  227  ........A.C.....G........................................................-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  90.0% (27/30)    IGHD2-8*01   1    -------------------------------------------------------------------------------.....A.....  11

                                      ----CDR3-IMGT------------------------>                                  
                                      T  N  G  V  C  F  T  G  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_12705  271  CTAATGGTGTTTGCTTTACGGGGTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  342
D  90.0% (27/30)    IGHD2-8*01   12   ..........A....A...-----------------------------------------------------  30
J  100.0% (49/49)   IGHJ2*01     5    -----------------------.................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_338396

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         349     2e-98
IGHD3-16*01                                                                                           12.2    31   
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATTTTCC	TGGGGG	N/A	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTTTCCTGGGGGTGCTTATGATATC	ARHFPGGAYDI	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_12706    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTAATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  94.8% (236/249)  IGHV4-30-4*01  49   ..................A.............................G.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  S  S  S  G  T  T  Y  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  T  S 
                    Query_12706    91   CTGGAGTGGATTGGGTACATCTCTTCCAGTGGGACCACCTACTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGTTGACACGTCC  180
V  94.8% (236/249)  IGHV4-30-4*01  139  ......................A..A........G...............G......A..........T...........A.........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                         K  N  Q  F  S  L  K  L  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  H  F  P  G  G  A  Y 
                    Query_12706    181  AAGAACCAGTTCTCCCTGAAGCTGACCTCTGTGTCCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATTTTCCTGGGGGTGCTTAT  270
V  94.8% (236/249)  IGHV4-30-4*01  229  .........................G.......A.T.............................C...---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-16*01    17   -----------------------------------------------------------------------------......-------  22
J  97.9% (46/47)    IGHJ3*02       4    -----------------------------------------------------------------------------------.....T.  10

                                        ----->                                  
                                         D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12706    271  GATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  310
J  97.9% (46/47)    IGHJ3*02       11   ........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_338391

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            364     5e-103
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	CGTTCGG	ATGGTTCGGGGAGTT	CCTA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGCGTTCGGATGGTTCGGGGAGTTCCTAGGTATGGACGTC	AKAFGWFGEFLGMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  K  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12707  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAAAGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.8% (241/249)  IGHV3-9*01   47   ....................................C....G.T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  R  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12707  91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGGTAGGATAGGCTATGCGGATTCTGTGAAGGGCCGATTCACCATCTCAAGAGACAACGCCA  180
V  96.8% (241/249)  IGHV3-9*01   137  ..................................C..............C..........................C.............  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  L  Y  Y  C  A  K  A  F  G  W  F  G  E  
                    Query_12707  181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGCGAGGTGAGGACACGGCCTTGTATTACTGTGCAAAAGCGTTCGGATGGTTCGGGGAGT  270
V  96.8% (241/249)  IGHV3-9*01   227  ................................A...C................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD3-10*01  9    ----------------------------------------------------------------------------..............  22

                                      ---------------->                                 
                                      F  L  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12707  271  TCCTAGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
D  100.0% (15/15)   IGHD3-10*01  23   .-------------------------------------------------  23
J  100.0% (45/45)   IGHJ6*02     18   -----.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_311406

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCATGTCCCC	ATTACT	TCCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCATGTCCCCATTACTTCCATTGACTTC	ARAHVPITSIDF	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  A  I  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12708  1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCGCCATCAGTGGTTATTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.8% (224/244)  IGHV4-59*01  49   ...................C.............T........A....C.......G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  N  G  N  T  D  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  K 
                    Query_12708  91   TGGATTGGCTATATCTATTACAATGGAAACACCGACTACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCGAAGAAA  180
V  91.8% (224/244)  IGHV4-59*01  139  ........G.............G...G.G....A..................................A...G..........C.....C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  K  M  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  V  P  I  T  S  I  D 
                    Query_12708  181  CACTTCTCCCTGAAGATGACCTCCATGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCATGTCCCCATTACTTCCATTGAC  270
V  91.8% (224/244)  IGHV4-59*01  229  ..G............C...G...TG......................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-10*01  3    ---------------------------------------------------------------------------......---------  8
J  92.7% (38/41)    IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                 
                                       F  W  G  L  G  T  L  V  T  V  S  S 
                    Query_12708  271  TTCTGGGGCCTGGGAACCCTGGTCACCGTCTCGTCA  306
J  92.7% (38/41)    IGHJ4*02     12   .A........A.....................C...  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_338393

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            344     6e-97
IGHD4-4*01                                                                                            16.1    2.3  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD4-4*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCCTCC	GACTACAG	CACGTACGTGGAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCCTCCGACTACAGCACGTACGTGGAGTACTACTTCTATGGTGTGGACGTC	ARDPSDYSTYVEYYFYGVDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12709  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGGAATTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-7*01   47   ...........................................T.GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  K  Q  D  G  S  D  T  H  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_12709  91   AGTGGGTGGCCAGTATAAAACAAGATGGAAGTGACACACACTATGTGGACTCTGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-7*01   137  ............AC.....G..............G.A.T.................A.................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  F  L  H  M  N  R  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  S  D  Y  S  T  
                    Query_12709  181  AGAACTCACTGTTTCTGCATATGAACCGTCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGACCCCTCCGACTACAGCACGT  270
V  94.0% (235/250)  IGHV3-7*01   227  ............A......A......A.C.......................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD4-4*01   2    -----------------------------------------------------------------------------........-----  9

                                      R3-IMGT------------------------>                                 
                                      Y  V  E  Y  Y  F  Y  G  V  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12709  271  ACGTGGAGTACTACTTCTATGGTGTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
J  94.7% (54/57)    IGHJ6*02     6    --------.......A...C...A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_215358

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTCG	TATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCGTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12710  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_12710  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTTCCATATCAGTGGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ..................................G..................................A..........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  K  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  S  Y  G  S  G 
                    Query_12710  181  AAGAACAAGTTCTCCCTGAAGCTGACCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTCGTATGGTTCGGGG  270
V  96.4% (241/250)  IGHV4-31*03  229  ......C..................G............................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (21/21)   IGHD3-10*01  8    ------------------------------------------------------------------------------............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12710  271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (21/21)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_237842

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGATGGCCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTC	VRQSSDGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  S  Y
                    Query_12711  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCAGTTA  90
V  95.5% (278/291)  IGHV5-51*01  6    ....................................C.......................................AG.........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  T  G  L  E  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  S  P
                    Query_12711  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGTGGATGGGGATCATCTTTCCGGATGACTCTGATACCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ................................A..........................A...T.G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12711  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  ............................................G.....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                           
                                        K  Y  Y  C  V  R  Q  S  S  D  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_12711  271  CAAGTATTATTGTGTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  355
V  95.5% (278/291)  IGHV5-51*01  276  ..T......C....C......----------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                   
J  100.0% (42/42)   IGHJ6*02     15   -------------------------------------------..........................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_139568

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            318     6e-89
IGHD3-3*02                                                                                            12.2    31   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTT	GCATTT	CGATCTCCCACGAGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTGCATTTCGATCTCCCACGAGGCATGGACGTC	ARLHFDLPRGMDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	21	8	0	72.4
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  T  V  S  G  G  S  I  T  S  T  Y  W  W  N  W  V  R  Q  P  P  G  K  G  
                    Query_12712  1    GGTCCCTGAGACTCTCCTGTACTGTGTCTGGGGGCTCCATCACCAGTACTTACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGAC  90
V  91.1% (225/247)  IGHV4-4*01   47   ..A.....TCC...A....CG....C.....T..........G.....G.A.........G...........................G.  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  S  G  S  P  H  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  K  S  
                    Query_12712  91   TGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCCCCCACTACAGTCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCA  180
V  91.1% (225/247)  IGHV4-4*01   137  ...................................A..A......AC...........................................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  W  C  A  R  L  H  F  D  L  P  R  
                    Query_12712  181  AGAACCAGTTCTCCCTGAAGTTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTACTGGTGTGCGAGGTTGCATTTCGATCTCCCACGAG  270
V  91.1% (225/247)  IGHV4-4*01   227  ....................C....C.............................T..C........-----------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                          
D  100.0% (6/6)     IGHD3-3*02   7    ----------------------------------------------------------------------......--------------  12

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  A  I  V  S  S 
                    Query_12712  271  GCATGGACGTCTGGGGCCAAGGGACCACGGCCATCGTCTCCTCA  314
J  95.2% (40/42)    IGHJ6*02     21   --............................T..C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_319788

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           385     4e-109
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	AATCTCCCGTAGGT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCTCCCGTAGGTCTACTTTGACTAC	ARNLP*VYFDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	267	21	0	92.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  G  S  C  K  A  S  G  Y  T  F  T  T  F 
                    Query_12713  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGGCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTTT  91
V  92.7% (267/288)  IGHV1-18*01  7    .................................................A..T................................G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  A  R  Q  A  P  G  Q  G  L  E  W  M  G  R  F  N  T  Y  K  G  N  T  K  F  A  Q 
                    Query_12713  92   GCTATCAGCTGGGCGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGTAGGTTCAACACTTACAAAGGTAACACAAAGTTTGCACAG  181
V  92.7% (267/288)  IGHV1-18*01  97   .G...........T....................................AT..A...G.G.......T...........C.A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       G  L  Q  G  R  V  T  M  T  T  D  P  S  T  R  T  A  Y  M  D  L  R  S  L  R  S  D  D  T  A 
                    Query_12713  182  GGGCTCCAGGGCAGAGTCACCATGACCACAGACCCATCCACGCGCACAGCCTACATGGATCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.7% (267/288)  IGHV1-18*01  187  AA...............................A........A................G..............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       I  Y  Y  C  A  R  N  L  P  *  V  Y  F  D  Y  W  G  Q  G  I  L  G  T  V  P  S  
                    Query_12713  272  ATATATTACTGTGCGAGAAATCTCCCGTAGGTCTACTTTGACTACTGGGGCCAGGGAATCCTGGGCACCGTCCCCTCAG  350
V  92.7% (267/288)  IGHV1-18*01  277  G.G...............-------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                              
J  93.6% (44/47)    IGHJ4*02     2    --------------------------------..........................C.....T.......T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_319787

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           37.2    1e-06 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCACTC	CTATGGATCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTCCTATGGATCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12714  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGCTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_12714  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..................................G.................................T.....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  G  H  S  Y  G  S  G 
                    Query_12714  181  AAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTTTTACTGCGCGAGAGGTCACTCCTATGGATCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .....................C...G...........................G.A......T.......--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.5% (21/22)    IGHD3-10*01  7    -----------------------------------------------------------------------------......T......  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12714  271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  95.5% (21/22)    IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_319786

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           290     2e-80
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACGGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACGGCGCAACTGGTTCGACCCC	ARGGWRRRRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	215	30	0	87.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_12715  1    ACCCTGTCCCTCACCTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  87.8% (215/245)  IGHV4-34*01  49   .......................CTA..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  M  S  A  D  T  S  K  K 
                    Query_12715  91   TGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCATGTCAGCAGACACGTCCAAGAAA  180
V  87.8% (215/245)  IGHV4-34*01  139  ................A............CA.C.AC......C..T......A...............A....T...............C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  R  R  N  W 
                    Query_12715  181  CAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCTGGCGAAGACGGCGCAACTGG  270
V  87.8% (215/245)  IGHV4-34*01  229  ..GT...........C..A......T.....................G.....C......A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (49/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------.......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12715  271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (49/50)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_319785

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD4-17*01                                                                                           21.8    0.047 
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCC	CTACGGTGACT	TACCCCCT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCCCTACGGTGACTTACCCCCTTACTGGTACTTCGATCTC	ARGPYGDLPPYWYFDL	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	70	1	0	98.6
CDR1-IMGT	79	102	24	21	3	0	87.5
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	99	15	0	86.8
CDR3-IMGT (germline)	292	296	5	5	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  S  S  
                    Query_12716  8    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTTCCAGCC  97
V  93.1% (269/289)  IGHV5-51*01  5    ..................................................................G............C...A.....T  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      H  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  
                    Query_12716  98   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGACACCAGATACAGCC  187
V  93.1% (269/289)  IGHV5-51*01  95   ............................................................................T.............  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  P  F  Q  E  Q  V  N  L  S  V  E  K  S  I  T  T  A  Y  L  Q  W  T  S  L  R  P  S  D  T  
                    Query_12716  188  CGCCCTTCCAAGAACAGGTCAACCTTTCAGTCGAAAAGTCCATCACCACCGCCTACCTGCAGTGGACCAGCCTGAGGCCCTCGGACACCG  277
V  93.1% (269/289)  IGHV5-51*01  185  ..T.........GC.......C.A.C....C...C..........G....................G........A.G............  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-------------------CDR3-IMGT------------------>                            
                                      G  I  Y  Y  C  A  R  G  P  Y  G  D  L  P  P  Y  W  Y  F  D  L  W  G  R  G  A  L  V  T  V  
                    Query_12716  278  GCATATACTACTGTGCGAGGGGCCCCTACGGTGACTTACCCCCTTACTGGTACTTCGATCTCTGGGGCCGTGGCGCCCTGGTCACTGTCT  367
V  93.1% (269/289)  IGHV5-51*01  275  C...G..T...........-----------------------------------------------------------------------  293
                                      A  M  Y  Y  C  A                                                                          
D  100.0% (11/11)   IGHD4-17*01  4    -------------------------...........------------------------------------------------------  14
J  98.0% (49/50)    IGHJ2*01     2    --------------------------------------------..............................A...............  47

                                          
                                      S  S
                    Query_12716  368  CCTC  371
J  98.0% (49/50)    IGHJ2*01     48   ....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_319784

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           339     1e-95
IGHD3-16*01                                                                                           14.1    8.1  
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCC	TTTGGGG	TA	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCTTTGGGGTAAACTGGTTCGACCCC	ARAFGVNWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  D  Y  M  G  W  I  R  Q  A  P  G  K  G  L  
                    Query_12717  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACGACTACATGGGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-11*01  47   ...............................................T........A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  G  Y  T  G  T  T  I  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_12717  91   AGTGGCTTTCATATATTGGTTATACTGGAACTACCATATATTATGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  93.9% (232/247)  IGHV3-11*01  137  .....G.......C...A..AG..G...T.G.........C..C...........................A..................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  F  G  V  N  W  F  
                    Query_12717  181  AGAACTCACTGTTTCTGCAAATGAACAGCCTCAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGGGCCTTTGGGGTAAACTGGTTCG  270
V  93.9% (232/247)  IGHV3-11*01  227  ............A..................G...................................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-16*01  15   -----------------------------------------------------------------------.......------------  21
J  100.0% (49/49)   IGHJ5*02     3    --------------------------------------------------------------------------------..........  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12717  271  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (49/49)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_319783

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           375     2e-106
IGHD6-13*01                                                                                           21.8    0.039 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGAG	AGCAGCAGCTG	AA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGAGCAGCAGCTGAATGACTAC	ARDREQQLNDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12718  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (245/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  V  S  S  I  S  S  S  S  S  Y  M  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_12718  91   AGTGCGTCTCATCCATTAGTAGTAGCAGTAGTTACATGTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACGACGCCA  180
V  98.0% (245/250)  IGHV3-21*01  137  ....G....................T...........A.............................................A......  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  T  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  E  Q  Q  L  N  
                    Query_12718  181  AGAACTCACTGTATCTGCAAACGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGAGAGCAGCAGCTGAATG  270
V  98.0% (245/250)  IGHV3-21*01  227  .....................T................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  7    ---------------------------------------------------------------------------...........----  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12718  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (41/41)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_319782

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            385     4e-109
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREETAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	248	2	0	99.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12719  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.2% (248/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_12719  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  99.2% (248/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  E  T  A  A  V  V  
                    Query_12719  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGGAGACTGCGGCAGTGGTTA  270
V  99.2% (248/250)  IGHV3-7*01   227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12719  271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_319780

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           333     1e-93
IGHD4-17*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCCCCCTCCTGTG	GGTGACTAC	GTCAGCGGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCCCCCTCCTGTGGGTGACTACGTCAGCGGCCTTGACTAT	AKPPPVGDYVSGLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  S  T  S  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12720  1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCATGTTCAGCACCTCTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.1% (230/247)  IGHV3-30*18  47   ......................A.............CC.....T.G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12720  91   AGTGGGTGGCAGTCATTTCATATGATGGAAGTAATACGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGGGACAATTCCA  180
V  93.1% (230/247)  IGHV3-30*18  137  .............T..A...................AA.........................................A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  S  L  Q  M  S  S  L  R  P  E  D  S  G  V  Y  Y  C  A  K  P  P  P  V  G  D  Y  
                    Query_12720  181  AGAACACCCTGTCTCTGCAAATGAGCAGCCTGAGACCTGAGGACTCGGGTGTGTATTACTGTGCGAAGCCCCCTCCTGTGGGTGACTACG  270
V  93.1% (230/247)  IGHV3-30*18  227  .......G....A...........A..........G........A...C..................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD4-17*01  8    --------------------------------------------------------------------------------.........-  16

                                      ---------------->                                  
                                      V  S  G  L  D  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_12720  271  TCAGCGGCCTTGACTATTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  321
J  95.2% (40/42)    IGHJ4*02     7    ---------.......C................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_164033

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           344     6e-97
IGHD6-13*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGA	GGGTATAG	GAAGGTTG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGAGGGTATAGGAAGGTTGACGGTATGGTCGTC	AREGGYRKVDGMVV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  F  S  R  F  E  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_12721  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCACCTTCAGTAGATTTGAAATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  94.0% (235/250)  IGHV3-48*03  47   ................................T.............T.A........A...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  A  S  Y  I  S  S  S  G  R  T  R  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12721  91   AGTGGGCTTCATACATTAGTAGTAGTGGCAGAACCAGACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-48*03  137  ......T.....................T..T....T.T...................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  D  L  Q  M  S  S  L  R  V  E  D  T  G  V  Y  Y  C  A  R  E  G  G  Y  R  K  V  
                    Query_12721  181  AGAACTCACTGGATCTGCAAATGAGCAGCCTGAGAGTCGAGGACACGGGTGTTTATTACTGCGCGAGAGAGGGAGGGTATAGGAAGGTTG  270
V  94.0% (235/250)  IGHV3-48*03  227  ...........T............A...........C...........C............T........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-13*01  1    --------------------------------------------------------------------------........--------  8

                                      ------------->                                 
                                      D  G  M  V  V  W  G  Q  G  A  T  V  S  V  S  S 
                    Query_12721  271  ACGGTATGGTCGTCTGGGGCCAAGGGGCCACGGTCAGCGTCTCCTCA  317
J  93.6% (44/47)    IGHJ6*02     16   .........A................A.........C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_164032

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHD1-26*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGCCCGCTGCCCGTG	GTGGGAGCTA	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATCAGCCCGCTGCCCGTGGTGGGAGCTATGACTAC	ARDQPAARGGSYDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12722  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATACCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGC  90
V  96.0% (240/250)  IGHV3-74*01  47   ..........................................G..G...........................................G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      L  W  V  S  R  I  N  T  V  G  T  D  I  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12722  91   TGTGGGTCTCACGTATTAATACTGTTGGGACTGACATAAGCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-74*01  137  .....................G..A.....G.AG..C.....................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Q  P  A  A  R  G  
                    Query_12722  181  AGAACACGCTGTATCTGCAAATGGACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGATCAGCCCGCTGCCCGTGGTG  270
V  96.0% (240/250)  IGHV3-74*01  227  .......................A..............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD1-26*01  7    ---------------------------------------------------------------------------------------...  9

                                      ------------->                                  
                                      G  S  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12722  271  GGAGCTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (10/10)   IGHD1-26*01  10   .......-----------------------------------------  16
J  100.0% (41/41)   IGHJ4*02     8    -------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_164031

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD6-13*01                                                                                           12.2    36    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	103	11	0	90.4
CDR3-IMGT (germline)	291	293	3	3	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_12723  4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTCAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCA  93
V  93.4% (271/290)  IGHV5-51*01  2    ..G.................................................G.................T...................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  V  P  G  K  G  P  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_12723  94   CCTACTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCCGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  183
V  93.4% (271/290)  IGHV5-51*01  92   G.........................A.......G.......T.....G.........................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  I  I  S  A  D  T  S  V  N  T  A  Y  L  Q  W  G  P  L  R  A  S  D  
                    Query_12723  184  GTCCGTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACACGTCCGTCAACACCGCCTACCTGCAGTGGGGCCCCCTGAGGGCCTCCGACA  273
V  93.4% (271/290)  IGHV5-51*01  182  .C......................C..............A....A...G...................A..AG.....A......G....  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12723  274  CCGCCATATATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  93.4% (271/290)  IGHV5-51*01  272  .......G............-------------------------------------------------------------------  291
                                      T  A  M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    -------------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_164036

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           313     1e-87
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGG	AGCAGCAGCT	CTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGGAGCAGCAGCTCTATGACTAC	ARDREQQLYDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12724  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAATTCTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-21*01  47   .....................................C....G.AGC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  D  R  S  T  Y  M  S  H  A  D  S  V  K  G  R  F  T  I  S  R  D  D  G  
                    Query_12724  91   AGTGGGTCGCGTCCATTAGTGACAGAAGTACTTACATGTCCCACGCAGACTCAGTGAAGGGCCGATTCACCATTTCCAGAGACGACGGCA  180
V  90.0% (225/250)  IGHV3-21*01  137  ........T.A.........AGT..T....G......A.A.T...............................C.........A...C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  R  S  V  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  R  E  Q  Q  L  Y  
                    Query_12724  181  AGAGGTCAGTGTATCTGCAAATGAATAGCCTGAGGGCCGACGACACGGCTGTCTATTACTGTGCGAGAGATAGGGAGCAGCAGCTCTATG  270
V  90.0% (225/250)  IGHV3-21*01  227  ...AC...C................C........A.....G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD6-13*01  7    ---------------------------------------------------------------------------..........-----  16
J  97.6% (40/41)    IGHJ4*02     8    ----------------------------------------------------------------------------------------..  9

                                      ---->                                  
                                      D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_12724  271  ACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.6% (40/41)    IGHJ4*02     10   ............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_164035

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           414     5e-118
IGHD6-19*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCCTTAGGGTC	TATAGCAGTGGCTGGTAC	TC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCCTTAGGGTCTATAGCAGTGGCTGGTACTCTTGGCTAC	ARVPLGSIAVAGTLGY	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_12725  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAATTAT  91
V  95.8% (277/289)  IGHV1-18*01  7    .....................................................................................GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  V  F  N  G  N  T  R  H  T  L 
                    Query_12725  92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCAGCGTTTTCAATGGTAACACAAGACATACACTG  181
V  95.8% (277/289)  IGHV1-18*01  97   ........C.........................................A..........C..A..............ACT..G...A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  N  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_12725  182  AAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAACACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  95.8% (277/289)  IGHV1-18*01  187  ...........................................G..............................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  V  P  L  G  S  I  A  V  A  G  T  L  G  Y  W  G  Q  G  T  L  V  I  V  S 
                    Query_12725  272  GTGTATTACTGTGCGAGAGTTCCCTTAGGGTCTATAGCAGTGGCTGGTACTCTTGGCTACTGGGGCCAGGGAACCCTGGTCATTGTCTCC  361
V  95.8% (277/289)  IGHV1-18*01  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (18/18)   IGHD6-19*01  4    --------------------------------..................----------------------------------------  21
J  92.9% (39/42)    IGHJ4*02     7    ----------------------------------------------------...A..........................CC......  44

                                          
                                       S  
                    Query_12725  362  TCAG  365
J  92.9% (39/42)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_222603

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           358     4e-101
IGHD2-2*01                                                                                            10.3    123   
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCTT	TAGTA	AAACTTCCAGTTGGAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTTTAGTAAAACTTCCAGTTGGATTGATGCCTTTGATATC	ARGFSKTSSWIDAFDI	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  N  F  G  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_12726  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCACTAATTTTGGCATGCACTGGGTCCGCCAGGTTCCAGGCAAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-33*01  47   ..........................................G..GC.A.......................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  K  K  D  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12726  91   AGTGGGTGGCCGTTATATGGTATGATGGAAGTAAAAAAGACTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (239/249)  IGHV3-33*01  137  ..........A.......................T...T......C............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  M  Y  Y  C  A  R  G  F  S  K  T  S  S  
                    Query_12726  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATGTATTACTGTGCGAGAGGCTTTAGTAAAACTTCCAGTT  270
V  96.0% (239/249)  IGHV3-33*01  227  ..................................................G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-2*01   10   -------------------------------------------------------------------------.....------------  14

                                      T------------------>                                  
                                      W  I  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12726  271  GGATTGATGCCTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
J  98.0% (49/50)    IGHJ3*02     1    ----......T...........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_222602

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           330     1e-92
IGHD6-6*01                                                                                            23.8    0.011
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	TC	ATAGCAGCTCGT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACTCATAGCAGCTCGTACTACTATGAGTAC	TTHSSSYYYEY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	232	21	0	91.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  T  W  L  S  W  V  R  Q  D  P  E  K  G  L  
                    Query_12727  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTAACACCTGGCTGAGCTGGGTCCGCCAGGATCCAGAGAAGGGTCTGG  90
V  91.7% (232/253)  IGHV3-15*01  47   .......T.......................................G.....A..................C.....G......G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      A  W  V  G  R  I  K  S  E  T  H  G  G  T  T  D  Y  P  A  P  V  K  G  R  F  T  V  S  R  D  
                    Query_12727  91   CGTGGGTTGGCCGTATTAAAAGCGAGACTCATGGTGGGACAACAGACTACCCTGCACCCGTGAAAGGCAGATTCACCGTCTCTAGAGATG  180
V  91.7% (232/253)  IGHV3-15*01  137  A......................A.A...G....................G..........................A....A.......  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  D  T  L  Y  L  H  M  N  D  L  K  S  E  D  T  A  V  Y  Y  C  T  T  H  S  S  S  Y  
                    Query_12727  181  ATTCAAAAGACACACTATATCTGCACATGAACGACCTGAAAAGCGAGGACACAGCCGTGTATTACTGCACCACTCATAGCAGCTCGTACT  270
V  91.7% (232/253)  IGHV3-15*01  227  ........A....G..G........A......AG........C........................T.....-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (12/12)   IGHD6-6*01   5    ---------------------------------------------------------------------------............---  16
J  91.7% (44/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  Y  E  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_12727  271  ACTATGAGTACTGGGGTCAGGGAACCCGGGTCACCGTCTCCTCAG  315
J  91.7% (44/48)    IGHJ4*02     4    ...T...C........C..........T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_222601

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           344     6e-97
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGG	AGCAGCAGCTGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGGAGCAGCAGCTGGTTGACTAC	ARDLEQQLVDY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	24	17	4	3	70.8
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	250	237	10	3	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12728  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTCAGTAGTTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-21*01  47   ............................T.................C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  T  T  T     Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12728  91   AGTGGGTCTCATCCATTAGCACTACTACT---TACATATACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  177
V  94.8% (237/250)  IGHV3-21*01  137  ...................T.G..G..G.AGT..............A...........................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  E  Q  Q  L  V  
                    Query_12728  178  AGAACTCAGTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGGAGCAGCAGCTGGTTG  267
V  94.8% (237/250)  IGHV3-21*01  227  ........C.....C.......................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD6-13*01  7    ---------------------------------------------------------------------------............---  18
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12728  268  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (42/42)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_222600

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCGAGTGGG	TAGCAGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCGAGTGGGTAGCAGTGGCTGGCTTGACTCC	ARGRVGSSGWLDS	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	247	223	21	3	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  I  V  S  G  G     I  S  G  F  N  W  Y  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12729  1    ACCCTGTCCCTCACCTGCATTGTCTCTGGAGGC---ATCAGCGGTTTTAACTGGTACAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  87
V  90.3% (223/247)  IGHV4-4*02   49   ..................GC.........T...TCC......A..AG........GG.......................G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  Q  S  G  R  T  N  Y  N  P  S  L  K  S  R  L  T  M  S  V  D  K  S  K 
                    Query_12729  88   GAGTGGATTGGGGAAATCTATCAGAGTGGGCGCACCAACTACAACCCGTCCCTCAAGAGTCGACTCACCATGTCAGTAGACAAGTCCAAG  177
V  90.3% (223/247)  IGHV4-4*02   139  .......................T......A................................G.......A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  E  L  S  L  N  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  V  G  S  S  G  W 
                    Query_12729  178  AATGAACTCTCCCTGAACCTGAAGTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCGAGTGGGTAGCAGTGGCTGG  267
V  90.3% (223/247)  IGHV4-4*02   229  ..CC.GT..........G....GC..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-19*01  6    -----------------------------------------------------------------------------.............  18

                                      -------->                                
                                       L  D  S  W  G  Q  G  T  L  V  A  V  S  S
                    Query_12729  268  CTTGACTCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTC  308
J  95.0% (38/40)    IGHJ4*02     7    -......A......................A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_222607

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           375     2e-106
IGHD3-3*01                                                                                            16.1    2.2   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTA	ACGATTTT	CATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACGATTTTCATTATGGTATGGACGTC	ARVNDFHYGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	245	5	0	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12730  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATTCGCCAGCACCCAGGGAAGGGC  90
V  98.0% (245/250)  IGHV4-31*03  49   ...................C................................................C.....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  V  G  Y  M  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12730  91   CTGGAGTGGGTTGGGTACATGTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.0% (245/250)  IGHV4-31*03  139  .........A..........C.....................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  D  F  H  Y  G 
                    Query_12730  181  AAGAACCAGCTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTTAACGATTTTCATTATGGT  270
V  98.0% (245/250)  IGHV4-31*03  229  .........T............................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-3*01   6    -------------------------------------------------------------------------........---------  13
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12730  271  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  312
J  100.0% (45/45)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_222606

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           313     2e-87
IGHD4-17*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GTTCATC	GACTCCGGTGACT	TCCTCGACCT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGAGTTCATCGACTCCGGTGACTTCCTCGACCTCTACTTTTACGGAATGGCCGTC	ATEFIDSGDFLDLYFYGMAV	249	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	105	9	0	92.1
CDR3-IMGT (germline)	249	256	8	7	1	0	87.5
Total	N/A	N/A	256	228	28	0	89.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  F  G  F  T  F  S  D  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12731  1    GGTCCCTGAGACTCTCCTGTGCAGTCTTTGGATTCACCTTCAGTGACTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.1% (228/256)  IGHV3-15*01  47   .......T................C..C.........T......A..GCCTGG....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  S  R  T  D  G  G  T  A  D  Y  A  A  P  V  K  G  R  F  I  I  S  R  D  
                    Query_12731  91   AGTGGGTTGGCCGCATTAGAAGCAGAACCGATGGTGGGACGGCAGACTACGCTGCACCCGTGAAAGGCAGATTCATCATCTCAAGAGATG  180
V  89.1% (228/256)  IGHV3-15*01  137  .............T....A.....A...T...........AA.................................C..............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      E  S  K  T  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  T  E  F  I  D  S  
                    Query_12731  181  AATCGAAGACCACCCTTTATCTTCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTCTATTACTGTGCCACAGAGTTCATCGACTCCG  270
V  89.1% (228/256)  IGHV3-15*01  227  .T..A..A.A...G..G.....G...................................G.........A.......--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  92.3% (12/13)    IGHD4-17*01  2    -----------------------------------------------------------------------------------....A..  8

                                      ----CDR3-IMGT------------------------>                                 
                                      G  D  F  L  D  L  Y  F  Y  G  M  A  V  W  G  Q  G  S  S  V  P  V  S  S 
                    Query_12731  271  GTGACTTCCTCGACCTCTACTTTTACGGAATGGCCGTCTGGGGCCAAGGGAGTTCGGTCCCCGTCTCCTCA  341
D  92.3% (12/13)    IGHD4-17*01  9    ......-----------------------------------------------------------------  14
J  85.5% (47/55)    IGHJ6*02     8    ----------------.....AC.....T....A.................CCA.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_222605

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           357     1e-100
IGHD3-10*01                                                                                           12.2    33    
IGHJ5*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CATTGGTCGCCTAGGG	CGGGGA	CTCACCGGGGGCTAACT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATTGGTCGCCTAGGGCGGGGACTCACCGGGGGCTAACTAACTGGTTCGACCCC	AKHWSPRAGTHRGLTNWFDP	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12732  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-23*01  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  N  T  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12732  91   AGTGGGTCTCAACTATTAGTGGTAATACTGGTAGTACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (238/248)  IGHV3-23*01  137  ...........G............G.GG......C.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      M  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  F  Y  C  A  K  H  W  S  P  R  A  G  
                    Query_12732  181  TGAACACACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTTTTACTGTGCGAAACATTGGTCGCCTAGGGCGGGGA  270
V  96.0% (238/248)  IGHV3-23*01  227  A......G............................................A.A.............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD3-10*01  15   ------------------------------------------------------------------------------------......  20

                                      R3-IMGT------------------------>                                
                                      T  H  R  G  L  T  N  W  F  D  P  W  G  L  G  P  L  V  P  V  P  S
                    Query_12732  271  CTCACCGGGGGCTAACTAACTGGTTCGACCCCTGGGGCCTGGGACCCCTGGTCCCCGTCCCCTC  334
J  91.5% (43/47)    IGHJ5*02     3    -----------------......................A....A........A.....T....  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_222604

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           318     6e-89
IGHD3-22*01                                                                                           12.2    31   
IGHJ3*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TC	ATGATA	AACCTAGATCTTGTC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCATGATAAACCTAGATCTTGTCTTTGATATC	AKVMINLDLVFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  I  F  S  N  F  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12733  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCATCTTTAGCAACTTTGGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-23*01  47   ................................T...C........G..A..C.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  S  D  S  G  E  R  T  E  F  A  D  S  V  K  G  R  F  T  M  S  R  D  N  S  
                    Query_12733  91   AGTGGGTCGCGTTTATTAGTGATAGTGGTGAGCGCACAGAGTTCGCGGACTCCGTGAAGGGCCGGTTCACCATGTCCAGAGACAATTCCA  180
V  90.8% (226/249)  IGHV3-23*01  137  ........T.AGC........G........GTA.....T.C.A...A..........................C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      R  N  T  L  Y  L  Q  M  N  R  L  R  V  D  D  T  A  V  Y  Y  C  A  K  V  M  I  N  L  D  L  
                    Query_12733  181  GGAACACGCTGTATCTGCAAATGAACAGGCTGAGAGTCGACGACACGGCCGTATATTACTGTGCGAAAGTCATGATAAACCTAGATCTTG  270
V  90.8% (226/249)  IGHV3-23*01  227  A...........................C.......C...G............................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD3-22*01  9    -----------------------------------------------------------------------......-------------  14

                                      ---------->                                  
                                      V  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_12733  271  TCTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  315
J  97.7% (42/43)    IGHJ3*02     8    --........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_57822

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            339     2e-95
IGHD4-4*01                                                                                            16.1    2.2  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD4-4*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	N/A	GACTACAG	AAAAGTATT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGACTACAGAAAAGTATTTACGGCATGGGCGTC	AKGLQKSIYGMGV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  F  A  M  H  W  A  R  Q  T  P  G  K  A  L  
                    Query_12734  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTTTGCCATGCACTGGGCCCGGCAAACTCCAGGGAAGGCCCTGG  90
V  93.6% (233/249)  IGHV3-9*01   47   ................................................A..............T.......G............G.....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  Y  N  S  D  N  I  V  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  A  
                    Query_12734  91   AGTGGGTCTCAAGTATTAGTTACAATAGTGATAATATAGTCTATGCCGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAGCGCCA  180
V  93.6% (233/249)  IGHV3-9*01   137  ...........G.........GG.......G..GC....G......G.....................................A.....  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  F  Y  Y  C  A  K  G  L  Q  K  S  I  Y  
                    Query_12734  181  AGAACTCCCTGTATTTGCAAATGAGCAGTCTGAGAGCTGAGGACACGGCCTTTTATTACTGTGCAAAAGGACTACAGAAAAGTATTTACG  270
V  93.6% (233/249)  IGHV3-9*01   227  ..............C.........A...........................G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD4-4*01   2    ---------------------------------------------------------------------........-------------  9
J  95.8% (46/48)    IGHJ6*02     15   --------------------------------------------------------------------------------------....  18

                                      ---------->                                 
                                      G  M  G  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12734  271  GCATGGGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  95.8% (46/48)    IGHJ6*02     19   .T....A.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_316081

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD6-13*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	RDTGTWGPGSRPQKMTT	283	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	69	70	67	2	1	95.7
CDR1-IMGT	70	93	24	21	3	0	87.5
FR2-IMGT	94	144	51	46	5	0	90.2
CDR2-IMGT	145	168	24	23	1	0	95.8
FR3-IMGT	169	282	114	110	4	0	96.5
CDR3-IMGT (germline)	283	290	8	8	0	0	100
Total	N/A	N/A	291	275	15	1	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L   G  S  L  E  Q  R  *  K  S  P  G  I  L  *  R  S  P  V  R  V  L  D  T  P  F  P  P  
                    Query_12735  1    GCAGCTGG-GCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTTCCACCTA  89
V  94.5% (275/291)  IGHV5-51*01  6    ........T.................................G..................A...............G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                      T  G  S  P  G  C  A  R  C  P  G  K  A  W  S  G  W  E  S  S  I  L  V  T  L  M  P  D  T  A  
                    Query_12735  90   CTGGATCGCCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGTTGGGAGTCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  179
V  94.5% (275/291)  IGHV5-51*01  96   ........G.............A.......................A....GA.......................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                      R  P  S  K  A  R  S  P  S  Q  P  T  S  P  S  A  P  P  T  C  S  G  V  A  *  R  P  R  T  P  
                    Query_12735  180  GTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACCCCGC  269
V  94.5% (275/291)  IGHV5-51*01  186  ......................A...........................................C..................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                      P  C  I  A  V  R  D  T  G  T  W  G  P  G  S  R  P  Q  K  M  T  T  G  A  R  E  P  W  S  P  
                    Query_12735  270  CATGTATTGCTGTGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCACCGT  359
V  94.5% (275/291)  IGHV5-51*01  276  ........A............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-13*01  8    ---------------------------------------.......--------------------------------------------  14
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                      S  P  Q 
                    Query_12735  360  CTCCTCAG  367
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_316080

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           333     1e-93
IGHD1-26*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACAAGGGGATAAC	TATAGTG	ACGAATCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACAAGGGGATAACTATAGTGACGAATCT	AQGDNYSDES	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	241	2	2	0	0	100
Total	N/A	N/A	241	227	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  W  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_12736  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTTGGAACTACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.2% (227/241)  IGHV3-53*01  47   ............................................A.C..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  A  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  K  
                    Query_12736  91   AGTGGGTCTCAGTCATTTATGCCGGTGGTAGCACATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  94.2% (227/241)  IGHV3-53*01  137  .............T......AG...............C..C........................................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------CDR3-IMGT---------> 
                                      K  V  L  Y  L  Q  I  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  Q  G  D  N  Y  S  D  E  S  
                    Query_12736  181  AAGTGTTGTATCTTCAAATCAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCACAAGGGGATAACTATAGTGACGAATCTT  270
V  94.2% (227/241)  IGHV3-53*01  227  .CAC.C.............G.........................................-----------------------------  287
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  100.0% (7/7)     IGHD1-26*01  3    --------------------------------------------------------------------------.......---------  9
J  97.1% (33/34)    IGHJ4*02     15   -----------------------------------------------------------------------------------------.  15

                                                                       
                                      W  G  R  G  T  L  V  T  V  S  S  
                    Query_12736  271  GGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  303
J  97.1% (33/34)    IGHJ4*02     16   ......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_143609

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD3-16*02                                                                                           12.2    32   
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGT	TCGTTA	CCCAATCTTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTTCGTTACCCAATCTTGGCTACTACTACGGTATGGACGTC	ARDRSLPNLGYYYGMDV	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	222	22	0	91


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  M  G  L  E  
                    Query_12737  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCATCAGCAGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGATGGGACTGGAGT  93
V  91.0% (222/244)  IGHV4-59*01  50   .....TCC...A....C.............G.........T...........................C.........A...........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  H  I  Y  Y  S  G  T  T  S  Y  D  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N  
                    Query_12737  94   GGATTGGGCATATCTATTACAGTGGGACCACCAGTTACGATCCTTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAATC  183
V  91.0% (222/244)  IGHV4-59*01  140  ........T..................G.....AC...A.C..C...........................G................C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  S  L  P  N  L  G  Y  
                    Query_12737  184  AGTTCTCCCTGAAGCTGAATTCCGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATCGTTCGTTACCCAATCTTGGCTACT  273
V  91.0% (222/244)  IGHV4-59*01  230  ..................GC..T.......................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD3-16*02  28   --------------------------------------------------------------------......----------------  33
J  96.4% (53/55)    IGHJ6*02     8    -------------------------------------------------------------------------------------.....  12

                                      ---------------->                                 
                                      Y  Y  G  M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_12737  274  ACTACGGTATGGACGTCTGGGGCCAAGGGGCCACCGTCACCGTCTCCTCA  323
J  96.4% (53/55)    IGHJ6*02     13   .............................A....G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_143608

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         280     1e-77
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	GGAGTCGTAATTAT	CATGGGAATTTCTCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGAGTCGTAATTATCATGGGAATTTCTCCTTCGACCAC	ARGSRNYHGNFSFDH	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	44	7	0	86.3
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	214	35	0	85.9


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  I  D  S  V  Y  Y  S  L  N  W  I  R  Q  T  P  L  K  G  
                    Query_12738    4    CCCTGAGACTCTCCTGCGCTGTGTCTGGTGGCTCCATCGACAGTGTTTACTACTCCTTAAACTGGATCCGGCAGACACCACTGAAGGGCC  93
V  85.9% (214/249)  IGHV4-30-2*01  50   .....TCC...A..........C...............AG.....G.GGT.......GG.G.............C.....GG........  139
                                           L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Q  H  S  G  A  T  Y  Y  N  P  S  L  E  S  R  V  S  L  S  V  D  R  S  
                    Query_12738    94   TGGAGTGGATTGGCTACATCCAGCATTCTGGGGCCACCTACTACAACCCGTCCCTCGAGAGTCGGGTCTCCCTTTCAGTAGACCGGTCCA  183
V  85.9% (214/249)  IGHV4-30-2*01  140  .............G......T.T...AG....AG......................A.......A...A..A.A.........A......  229
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        K  G  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  R  N  Y  H  G  
                    Query_12738    184  AGGGCCAGTTCTCCCTGAGGCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGAGGGAGTCGTAATTATCATGGGA  273
V  85.9% (214/249)  IGHV4-30-2*01  230  ..AA..............A.....G...........................G................---------------------  298
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  85.7% (12/14)    IGHD3-3*01     15   ---------------------------------------------------------------------.....G..T.....-------  28

                                        ---------------->                                  
                                        N  F  S  F  D  H  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_12738    274  ATTTCTCCTTCGACCACTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTCAG  324
J  93.0% (40/43)    IGHJ5*02       9    --------.......C..............C.......A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_96372

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*04                                                                                           346     2e-97
IGHD1-20*01                                                                                           10.3    120  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*04	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCCTACCAAAAGTACGAAA	GGTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCCTACCAAAAGTACGAAAGGTATTACTTTGACTCT	ARVPYQKYERYYFDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12739  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTGACTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-21*04  47   ....................................C.......AG.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12739  91   AGTGGGTCTCATCCATTAGCAGTGGGAGTAGTTACATATACTACGCAGACTCAGTAAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-21*04  137  ...................T...A.T.............................G..................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  V  P  Y  Q  K  Y  E  
                    Query_12739  181  AGAATTCACTATATCTCCAGATGAACAGCCTGAGAGCCGAGGACACGGCCATCTATTACTGTGCGAGAGTTCCCTACCAAAAGTACGAAA  270
V  94.4% (235/249)  IGHV3-21*04  227  ....C.....G.....G..A..............................G.G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ---------------->                                  
                                      R  Y  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12739  271  GGTATTACTTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (5/5)     IGHD1-20*01  1    .....----------------------------------------------  5
J  95.7% (44/46)    IGHJ4*02     3    -----..........AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_143603

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-66*04                                                                                           280     1e-77
IGHD3-10*02                                                                                           10.3    117  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-66*04	IGHD3-10*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	GGAGATGGCCTCA	ATGTT	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAGGAGATGGCCTCAATGTTCTTTGACTAC	VRQEMASMFFDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	96	18	0	84.2
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	247	213	34	0	86.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  L  K  V  S  I  N  D  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12740  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTAAAAGTCAGTATAAATGACATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  86.2% (213/247)  IGHV3-66*04  47   ....................G.............C.CC.......GC..CT.......C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  A  L  I  Y  S  D  G  R  T  H  Y  A  D  S  V  K  G  R  I  T  L  S  R  D  T  S  K  
                    Query_12740  91   AGTGGGTCGCACTTATCTATAGCGATGGCAGAACACACTACGCAGACTCCGTCAAGGGCCGAATCACCCTCTCCAGAGACACGTCCAAGA  180
V  86.2% (213/247)  IGHV3-66*04  137  ........T..G....T.......G...T..C...T................G......A..T.....A............AT.......  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  L  Y  Y  C  V  R  Q  E  M  A  S  M  F  F  
                    Query_12740  181  ACACCTTATATCTTCAAATGAACAGCCTGCGAGTCGACGACACTGCCCTATATTATTGTGTGAGACAGGAGATGGCCTCAATGTTCTTTG  270
V  86.2% (213/247)  IGHV3-66*04  227  ....GC.G.....................A...C...G.....G..TG.G.....C....C......-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (5/5)     IGHD3-10*02  9    --------------------------------------------------------------------------------.....-----  13
J  100.0% (44/44)   IGHJ4*02     5    -------------------------------------------------------------------------------------.....  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12740  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (44/44)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_143602

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           302     3e-84
IGHD2-2*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CCATCCT	AGGATATTGCAGTGGTCCCAGCTGC	GGTGTTTCTGTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCCATCCTAGGATATTGCAGTGGTCCCAGCTGCGGTGTTTCTGTGTTTGACTAC	AKAILGYCSGPSCGVSVFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	221	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  Y  A  M  H  W  V  R  Q  A  P  D  K  G  L  
                    Query_12741  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACATTCAGTAAATATGCCATGCACTGGGTCCGCCAGGCTCCCGACAAGGGGCTGG  90
V  88.8% (221/249)  IGHV3-30*18  47   .....................................C.......GC....G........................A.G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  F  D  G  T  Y  K  Y  Y  G  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_12741  91   AGTGGGTGGCTGTCATTTCATTTGATGGAACTTACAAATATTATGGAGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  88.8% (221/249)  IGHV3-30*18  137  ..........A..T..A....A........G.A.T.....C....C..........A.................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      R  S  T  F  S  L  Q  M  D  S  L  K  V  E  D  S  A  I  Y  Y  C  A  K  A  I  L  G  Y  C  S  
                    Query_12741  181  GGAGCACTTTTTCTCTGCAAATGGACAGCCTGAAAGTTGAGGACTCGGCTATCTATTACTGTGCGAAAGCCATCCTAGGATATTGCAGTG  270
V  88.8% (221/249)  IGHV3-30*18  227  A..A...GC.G.A..........A.........G..C.......A.....G.G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.0% (22/25)    IGHD2-2*01   1    ----------------------------------------------------------------------------.........T...A  14

                                      R3-IMGT------------------------>                                  
                                      G  P  S  C  G  V  S  V  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12741  271  GTCCCAGCTGCGGTGTTTCTGTGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  88.0% (22/25)    IGHD2-2*01   15   ..A........-------------------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    -----------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_143601

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           363     1e-102
IGHD6-19*01                                                                                           21.8    0.040 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCAGG	GCAGTGGCTGG	CACG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTC	ARVPGQWLARGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12742  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (239/246)  IGHV3-53*01  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  M  Y  S  G  G  T  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_12742  91   AGTGGGTCTCAGTTATGTATAGCGGTGGGACCACATACTACGCAGAGTCCGTGAAGGGCCGATTCACCATCTCAAGAGACAATTCCAAGA  180
V  97.2% (239/246)  IGHV3-53*01  137  ................T...........T.G...............C..........................C................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  G  Q  W  L  A  R  
                    Query_12742  181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGTCCCAGGGCAGTGGCTGGCACGCG  270
V  97.2% (239/246)  IGHV3-53*01  227  ..................................................................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (11/11)   IGHD6-19*01  8    -------------------------------------------------------------------------...........------  18
J  100.0% (46/46)   IGHJ6*02     17   ----------------------------------------------------------------------------------------..  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12742  271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (46/46)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_143600

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         327     9e-92
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	N/A	N/A	TCACCTGCCAACCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGATCACCTGCCAACCCCTACTACCACGCTCTGGACGTC	ARSPANPYYHALDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	26	21	20	1	0	95.2
CDR1-IMGT	27	56	30	27	3	0	90
FR2-IMGT	57	107	51	48	3	0	94.1
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	243	226	17	0	93


Alignments

                                        <-----FR1-IMGT------><----------CDR1-IMGT---------><--------------------FR2-IMGT----------
                                         S  L  T  C  T  V  S  G  V  Y  I  S  N  G  G  Y  S  W  T  W  I  R  Q  P  P  G  R  G  P  E 
                    Query_12743    6    TCCCTCACCTGCACTGTCTCTGGTGTCTACATCAGCAATGGTGGTTACTCCTGGACCTGGATCCGGCAGCCACCAGGGAGGGGCCCGGAG  95
V  93.0% (226/243)  IGHV4-30-2*01  55   ............G............G..C........G.................G.......................A.....T....  144
                                         S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                        -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                         W  I  G  Y  I  Y  Q  S  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_12743    96   TGGATTGGGTACATCTATCAAAGTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGCGTCACCATATCGGTAGACAGGTCCAAGAAC  185
V  93.0% (226/243)  IGHV4-30-2*01  145  ....................T...............................A......A...........A..................  234
                                         W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 

                                        IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                         Q  F  S  V  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  A  N  P  Y  Y  H  A 
                    Query_12743    186  CAGTTCTCCGTTAACTTGAGTTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGATCACCTGCCAACCCCTACTACCACGCT  275
V  93.0% (226/243)  IGHV4-30-2*01  235  .........C.G..GC....C..........................G...............---------------------------  297
                                         Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  92.7% (51/55)    IGHJ6*02       8    -----------------------------------------------------------------------------.......T...G.  20

                                        -------->                                 
                                         L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12743    276  CTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTCA  317
J  92.7% (51/55)    IGHJ6*02       21   A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_229387

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           315     5e-88
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TCACCGCGCGTTGA	CAGTGGCTGG	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATCACCGCGCGTTGACAGTGGCTGGAAACTACTACGGTATGGACGTC	AKDHRALTVAGNYYGMDV	264	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	149	45	19	5	21	42.2
FR3-IMGT	150	263	114	112	2	0	98.2
CDR3-IMGT (germline)	264	271	8	7	1	0	87.5
Total	N/A	N/A	271	238	12	21	87.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  F  T  F  S  S  Y  A  F  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12744  1    GGTCCCTGAGACTCTCCTGTGAAGGCTCTGGATTCACCTTTAGCAGCTATGCCTTCAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.8% (238/271)  IGHV3-23*01  47   .....................C..C............................A.G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----------------CDR2-IMGT-----------------><------------------------------
                                      E  W  V  S  A  I  G  S  R  V  S  P  I  G  N  G  D  G  R  A  Y  Y  A  D  S  V  K  G  R  F  
                    Query_12744  91   AGTGGGTCTCAGCTATTGGTAGTAGAGTCTCACCTATTGGTAATGGTGATGGTAGAGCATACTATGCAGACTCCGTGAAGGGCCGGTTCA  180
V  87.8% (238/271)  IGHV3-23*01  137  .................A..G....---------------------..G......CA.......C.........................  205
                                      E  W  V  S  A  I  S  G  S                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  
                    Query_12744  181  CCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGG  270
V  87.8% (238/271)  IGHV3-23*01  206  .........................................................................A..............A.  295
                                      T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  

                                      ----------------CDR3-IMGT--------------------->                                 
                                      D  H  R  A  L  T  V  A  G  N  Y  Y  G  M  D  V  W  G  P  G  T  T  V  T  V  S  S 
                    Query_12744  271  ATCACCGCGCGTTGACAGTGGCTGGAAACTACTACGGTATGGACGTCTGGGGCCCTGGGACCACGGTCACCGTCTCCTCA  350
V  87.8% (238/271)  IGHV3-23*01  296  .-------------------------------------------------------------------------------  296
                                                                                                                      
D  100.0% (10/10)   IGHD6-19*01  9    ---------------..........-------------------------------------------------------  18
J  96.2% (51/53)    IGHJ6*02     10   ---------------------------...........................AA........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_229386

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           324     8e-91
IGHD3-16*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	ACTTA	GGGGGAG	ACCAACAATGGGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACTTAGGGGGAGACCAACAATGGGGGGACTACTTTGGCAAC	ANLGGDQQWGDYFGN	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	224	17	0	92.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  E  L  E 
                    Query_12745  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATAGTTACTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAAGAACTGGAG  90
V  92.9% (224/241)  IGHV4-59*08  49   ...............................G........G.........C.............................G.G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  G  R  V  T  M  S  I  D  T  S  K  S 
                    Query_12745  91   TGGATTGGCTATGTCTATTACAGTGGGAGTACCAACTACAACCCTTCCCTTAAGGGTCGAGTCACCATGTCAATAGACACGTCCAAGAGC  180
V  92.9% (224/241)  IGHV4-59*08  139  ........G...A................C..............C.....C...A.............A...G...............A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  N  L  G  G  D  Q  Q  W  G  D 
                    Query_12745  181  CAGTTCTCACTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTATATTACTGTGCGAACTTAGGGGGAGACCAACAATGGGGGGAC  270
V  92.9% (224/241)  IGHV4-59*08  229  ........C..........G...........................G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD3-16*01  18   ------------------------------------------------------------------.......-----------------  24
J  91.7% (44/48)    IGHJ4*02     1    ----------------------------------------------------------------------------------------..  2

                                      ----------->                                  
                                       Y  F  G  N  W  G  Q  G  S  L  V  T  I  S  S  
                    Query_12745  271  TACTTTGGCAACTGGGGCCAGGGATCCCTGGTCACCATCTCCTCAG  316
J  91.7% (44/48)    IGHJ4*02     3    .......A.T..............A...........G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_229385

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            339     2e-95
IGHD1-26*01                                                                                           18.0    0.60 
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAACAGTTTGTTGGCACCTG	AGTGGGAGC	CTGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACAGTTTGTTGGCACCTGAGTGGGAGCCTGATGATGCTTTTGATATC	ARVNSLLAPEWEPDDAFDI	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  R  S  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12746  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGCAGAAGCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.9% (232/247)  IGHV4-4*02   49   ...............................G............T..T.A........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  N  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  K  S  K 
                    Query_12746  91   GAGTGGATTGGGGAGATCTATCATGGTGGGAATACCAACTACAACCCGTCCCTCAAGAGTCGACTTACTATATCAGTAGACAAGTCCAAG  180
V  93.9% (232/247)  IGHV4-4*02   139  ..............A.........A......GC..............................G.C..C.....................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       N  Q  F  S  L  Q  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  S  L  L  A  P  E 
                    Query_12746  181  AACCAATTCTCCCTGCAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGAGAGTTAACAGTTTGTTGGCACCTGAG  270
V  93.9% (232/247)  IGHV4-4*02   229  .....G.........A.......C..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD1-26*01  6    ----------------------------------------------------------------------------------------..  7

                                      MGT----------------------->                                  
                                       W  E  P  D  D  A  F  D  I  W  G  Q  G  T  L  A  I  V  S  S  
                    Query_12746  271  TGGGAGCCTGATGATGCTTTTGATATCTGGGGCCAAGGGACATTGGCCATCGTCTCTTCAG  331
D  100.0% (9/9)     IGHD1-26*01  8    .......------------------------------------------------------  14
J  94.0% (47/50)    IGHJ3*02     1    -----------...............................A...T..C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_229384

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           371     6e-105
IGHD3-3*01                                                                                            44.9    5e-09 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCCCG	ACGATTTTTGGAGTGGTTATTAT	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCCCGACGATTTTTGGAGTGGTTATTATCTTGACTAC	ARGPDDFWSGYYLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	242	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  E  F  T  F  S  L  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12747  1    GGTCCCTGAGACTCTCCTGTGCAGCTTCTGAATTCACCTTCAGTCTCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  98.0% (242/247)  IGHV3-33*01  47   .........................G....G.............AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12747  91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  98.0% (242/247)  IGHV3-33*01  137  ..........................................................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  G  P  D  D  F  W  S  
                    Query_12747  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGGGGCCCCGACGATTTTTGGAGTG  270
V  98.0% (242/247)  IGHV3-33*01  227  ....................................C..............................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (23/23)   IGHD3-3*01   6    ---------------------------------------------------------------------------...............  20

                                      ---------------->                                  
                                      G  Y  Y  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12747  271  GTTATTATCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (23/23)   IGHD3-3*01   21   ........-------------------------------------------  28
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_229383

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           335     4e-94
IGHD2-15*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	ACCCGTTTTGTCT	TGGCGGTAGATGC	ATCTCGGGCTTGAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACCCGTTTTGTCTTGGCGGTAGATGCATCTCGGGCTTGAGTGACTTC	ARDPFCLGGRCISGLSDF	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  P  F  S  G  H  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_12748  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGCCCTTCAGTGGTCACTACTGGAACTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  93.9% (229/244)  IGHV4-34*01  49   .........................A.......T...........T.........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  R  G  G  S  T  T  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_12748  91   TGGATTGGGGAAATCAATCGTGGTGGAAGCACCACCTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCTGTAGACACGTCCAAGAAC  180
V  93.9% (229/244)  IGHV4-34*01  139  ...................A.A............A.................................A..A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  F  C  L  G  G  R  C 
                    Query_12748  181  CAATTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGCGAGACCCGTTTTGTCTTGGCGGTAGATGC  270
V  93.9% (229/244)  IGHV4-34*01  229  ..G...........G....G...........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (11/13)    IGHD2-15*01  13   -----------------------------------------------------------------------------...T.....C...  25

                                      -------------------->                                  
                                       I  S  G  L  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12748  271  ATCTCGGGCTTGAGTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.6% (40/41)    IGHJ4*02     8    --------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_229382

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12749  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12749  91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  96.8% (241/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  P  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_12749  181  AGAACACGTTGTATCTGCAAATGAACAGCCCGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  96.8% (241/249)  IGHV3-33*01  227  ........C.....................T.A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_12749  271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_229381

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           378     3e-107
IGHD6-25*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTCGGGTTTTC	CAGCGGCT	TGGGCGGCTTTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTCGGGTTTTCCAGCGGCTTGGGCGGCTTTGACTACTACTACGCTATGGACGGC	ARDVGFSSGLGGFDYYYAMDG	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  D  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  N  S 
                    Query_12750  2    CAGCTGGTGCAGTCTGGAGGTGACGTGAAGAAGCCGGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTTAGCAACTCT  91
V  91.7% (266/290)  IGHV1-18*01  7    ...................C...G...........T.............................T................C..G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  V  P  G  Q  G  L  E  W  M  G  W  I  S  T  Y  N  G  N  T  N  Y  A  Q 
                    Query_12750  92   GGCATCAACTGGGTGCGACAGGTCCCTGGACAAGGGCTAGAGTGGATGGGCTGGATCAGCACTTACAATGGAAACACAAATTATGCACAG  181
V  91.7% (266/290)  IGHV1-18*01  97   ..T....G..............C...............T...........A.........G..........T........C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  L  T  M  A  M  D  T  S  T  S  T  V  Y  M  E  L  T  S  L  R  S  D  D  S  A 
                    Query_12750  182  AACCTCCAGGGCAGACTCACCATGGCCATGGACACATCCACGAGCACAGTCTACATGGAGCTGACGAGCCTGAGATCTGACGACTCGGCC  271
V  91.7% (266/290)  IGHV1-18*01  187  ..G............G........A...CA...................C..............G...................A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------------CDR3-IMGT-------------------------->               
                                       V  Y  F  C  A  R  D  V  G  F  S  S  G  L  G  G  F  D  Y  Y  Y  A  M  D  G  W  G  Q  G  T 
                    Query_12750  272  GTGTATTTCTGTGCGAGAGATGTCGGGTTTTCCAGCGGCTTGGGCGGCTTTGACTACTACTACGCTATGGACGGCTGGGGCCAAGGGACC  361
V  91.7% (266/290)  IGHV1-18*01  277  .......A............----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (8/8)     IGHD6-25*01  9    --------------------------------........--------------------------------------------------  16
J  94.6% (53/56)    IGHJ6*02     7    ----------------------------------------------------............G........T................  44

                                                        
                                       P  V  T  V  S  S 
                    Query_12750  362  CCGGTCACCGTCTCCTCA  379
J  94.6% (53/56)    IGHJ6*02     45   A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_229380

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            316     2e-88
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CT	TATTGTAGTAGTAGCATCTGCTA	CCA	TGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTTATTGTAGTAGTAGCATCTGCTACCATGACCAC	ATYCSSSICYHDH	230	268	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	108	6	0	94.7
CDR3-IMGT (germline)	230	233	4	4	0	0	100
Total	N/A	N/A	220	211	9	0	95.9


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  V  T  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  K  H  D 
                    Query_12751  14   TCTGGAGTCACCTTTAGTACCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAAAGCACGAT  103
V  95.9% (211/220)  IGHV3-7*01   73   ......T............G..................................................................A...  162
                                       S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  K  Q  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  S  E  K  Y  Y  A  D  S  V  K  G  R  F  A  I  S  R  D  N  A  K  N  S  L  F  L  Q  M  S 
                    Query_12751  104  GGAAGTGAGAAATACTATGCGGACTCTGTGAAGGGCCGATTCGCCATCTCCAGAGACAACGCCAAGAACTCACTGTTTCTGCAAATGAGT  193
V  95.9% (211/220)  IGHV3-7*01   163  ...................T......................A.................................A...........AC  252
                                       G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><--------------CDR3-IMGT-------------->               
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  Y  C  S  S  S  I  C  Y  H  D  H  W  G  Q  G  I 
                    Query_12751  194  AGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGACTTATTGTAGTAGTAGCATCTGCTACCATGACCACTGGGGCCAGGGAATC  283
V  95.9% (211/220)  IGHV3-7*01   253  ..........................G.............--------------------------------------------------  292
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                    
D  91.3% (21/23)    IGHD2-2*01   5    ------------------------------------------.............C..G......-------------------------  27
J  95.1% (39/41)    IGHJ4*02     8    --------------------------------------------------------------------....T...............C.  29

                                                         
                                       L  V  T  V  S  S  
                    Query_12751  284  CTGGTCACCGTCTCCTCAG  302
J  95.1% (39/41)    IGHJ4*02     30   ...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_306497

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           346     2e-97
IGHD1-1*01                                                                                            10.3    120  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	CAACT	CACGGCCGCCTT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCAACTCACGGCCGCCTTACTTCTTTGACTAC	ARGGNSRPPYFFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  V  S  G  F  T  F  R  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12752  1    GGTCCCTGAGACTCTCCTGTGTAGTCTCTGGATTCACCTTTAGGACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGTTGG  90
V  94.4% (235/249)  IGHV3-21*01  47   .....................C..C...............C..T.G........................................C...  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  G  S  S  T  S  L  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12752  91   AGTGGGTCTCATCCATTGGTAGTAGTACTAGTCTCATATACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-21*01  137  .................A.........G....TA............A...........................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  A  R  G  G  N  S  R  P  P  
                    Query_12752  181  AGAACTCAGTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCTGTGTATTACTGTGCGAGAGGGGGCAACTCACGGCCGCCTT  270
V  94.4% (235/249)  IGHV3-21*01  227  ........C...........................C...G............................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-1*01   5    -------------------------------------------------------------------------.....------------  9

                                      ------------->                                  
                                      Y  F  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_12752  271  ACTTCTTTGACTACTGGGGCCAGGGAAGTCTGGTCACCGTCTCCTCAG  318
J  93.8% (45/48)    IGHJ4*02     1    ...A.......................CC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_306496

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           367     6e-104
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12753  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (242/249)  IGHV3-33*01  47   ............................................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12753  91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  97.2% (242/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_12753  181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  97.2% (242/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_12753  271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_237847

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           325     3e-91
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ3*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGGCCCCCC	TACTATGATCGTAGTGGTTAT	CACGAC	GATCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGACCGGCCCCCCTACTATGATCGTAGTGGTTATCACGACGATCCTTTTGATGTG	ARDRPPYYDRSGYHDDPFDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  R  D  Y  W  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_12754  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACTTTCAGAGACTACTGGATGCACTGGGTCCGTCAAGTTCCAGGGAAGGGACTGG  90
V  91.6% (229/250)  IGHV3-74*01  47   .....................C...............C.....TAG.....................C....C............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  G  D  G  T  G  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12754  91   TGTGGGTCTCACGTATCAATGGCGATGGCACTGGCACAAATTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.6% (229/250)  IGHV3-74*01  137  ................T...A.T.....G.G.A......GC.................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      T  N  T  L  Y  L  Q  M  T  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  R  P  P  Y  Y  D  
                    Query_12754  181  CGAATACACTGTATCTGCAAATGACCAGTCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCAAGAGACCGGCCCCCCTACTATGATC  270
V  91.6% (229/250)  IGHV3-74*01  227  A...C..G................A...........C.................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.2% (20/21)    IGHD3-22*01  5    --------------------------------------------------------------------------------.........A  14

                                      R3-IMGT------------------------>                                  
                                      R  S  G  Y  H  D  D  P  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12754  271  GTAGTGGTTATCACGACGATCCTTTTGATGTGTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  336
D  95.2% (20/21)    IGHD3-22*01  15   ...........-------------------------------------------------------  25
J  95.9% (47/49)    IGHJ3*01     2    -----------------...G..........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_306492

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           315     5e-88
IGHJ1*01                                                                                              46.8    3e-09


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	N/A	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GGGCGGGTCCTG	TCCAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGAAGAGGGGCGGGTCCTGTCCAGGAT	GRGAGPVQD	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	225	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  D  F  S  N  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12755  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGACTTCAGTAACTACTGGATGCACTGGGTCCGCCAAGCTCCAGGCAAGGGGCTGG  90
V  90.4% (225/249)  IGHV3-74*01  47   ...................................AC........G.................................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  H  S  N  S  D  G  T  N  T  A  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12755  91   TGTGGGTCTCACACAGCAACAGTGATGGGACTAACACAGCCTACGTGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  90.4% (225/249)  IGHV3-74*01  137  ............GT.TT..T..........G..G....AG.....C...........................................A  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      E  N  T  L  Y  L  Q  L  K  S  L  R  V  D  D  T  A  V  Y  Y  C  G  R  G  A  G  P  V  Q  D  
                    Query_12755  181  AGAACACGTTGTATCTGCAGTTGAAGAGTCTGAGAGTCGACGACACGGCTGTTTATTATTGTGGAAGAGGGGCGGGTCCTGTCCAGGATT  270
V  90.4% (225/249)  IGHV3-74*01  227  ........C..........AA....C..........C...G...........G.....C....C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  85.7% (36/42)    IGHJ1*01     11   ---------------------------------------------------------------------------------.....C.C.  19

                                                                       
                                      W  G  Q  G  T  L  V  V  A  S  S  
                    Query_12755  271  GGGGCCAGGGCACCCTGGTCGTCGCCTCGTCAG  303
J  85.7% (36/42)    IGHJ1*01     20   ....................AC..T...C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_229389

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           427     1e-121
IGHD2-8*02                                                                                            14.1    9.9   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GTGAGGATTTCTTTGATG	CTGGTGG	GTCCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGAGGATTTCTTTGATGCTGGTGGGTCCCACTACTACGGCTTGGACGTC	ARREDFFDAGGSHYYGLDV	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	71	0	0	100
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	111	3	0	97.4
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	291	282	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  N  F  A  A  
                    Query_12756  8    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAACTTTGCCGCCT  97
V  96.9% (282/291)  IGHV5-51*01  5    ..............................................................................G....A..AG..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      F  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  
                    Query_12756  98   TCTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCCGGTGACTCTGATACCAGATACAGCC  187
V  96.9% (282/291)  IGHV5-51*01  95   A...............................................................T.........................  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  A  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  R  A  S  D  T  
                    Query_12756  188  CGTCCTTCCAAGGCCAGGTCGCCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACACCG  277
V  96.9% (282/291)  IGHV5-51*01  185  ....................A....C.................................................A..............  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------------CDR3-IMGT----------------------->                   
                                      A  M  Y  Y  C  A  R  R  E  D  F  F  D  A  G  G  S  H  Y  Y  G  L  D  V  W  G  Q  G  T  T  
                    Query_12756  278  CCATGTATTACTGTGCGAGACGTGAGGATTTCTTTGATGCTGGTGGGTCCCACTACTACGGCTTGGACGTCTGGGGCCAAGGGACCACGG  367
V  96.9% (282/291)  IGHV5-51*01  275  .....................---------------------------------------------------------------------  295
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD2-8*02   12   ---------------------------------------.......--------------------------------------------  18
J  94.3% (50/53)    IGHJ6*02     10   ---------------------------------------------------..........TA...........................  48

                                                    
                                      V  T  V  S  S 
                    Query_12756  368  TCACCGTCTCTTCA  381
J  94.3% (50/53)    IGHJ6*02     49   ..........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_297251

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           299     2e-83
IGHD3-16*01                                                                                           10.3    114  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGG	TTGGG	N/A	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGGTTGGGTGGCTCGATGCC	AKGVGWLDA	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	220	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  P  Y  A  M  T  W  V  R  H  P  P  G  K  G  L  
                    Query_12757  1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTTAGTTTCAGTCCCTATGCCATGACCTGGGTCCGCCACCCTCCAGGGAAGGGGCTGG  90
V  88.4% (220/249)  IGHV3-23*01  47   ......................A...........C.CC..T..CAG...........G............GG..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  G  G  S  G  R  S  R  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12757  91   AGTGGGTCGCTGCTATTGGTGGCAGTGGTCGTAGTCGACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  88.4% (220/249)  IGHV3-23*01  137  ........T.A......A....T......G....CAC.T...................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  D  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  A  K  G  V  G  W  L  D  A  
                    Query_12757  181  AGGACACCCTATATTTGCAGATGAACAGTCTGAGAGTCGACGACACGGCCGTATATTATTGTGCGAAAGGGGTTGGGTGGCTCGATGCCT  270
V  88.4% (220/249)  IGHV3-23*01  227  ..A....G..G...C....A........C.......C...G.................C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD3-16*01  16   ------------------------------------------------------------------------.....-------------  20
J  93.5% (43/46)    IGHJ5*02     6    -----------------------------------------------------------------------------...T....CC...  18

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12757  271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  93.5% (43/46)    IGHJ5*02     19   .................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_179359

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           335     4e-94
IGHD6-19*01                                                                                           12.2    32   
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-19*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGCTTG	GCACTGGCT	CCTCG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATCGCTTGGCACTGGCTCCTCGTGCTTTCGATGTC	TRDRLALAPRAFDV	249	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	103	11	0	90.4
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	235	21	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  G  D  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12758  1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCAATTTTGGTGATTATGCTATGAACTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  91.8% (235/256)  IGHV3-49*04  47   ....................................CC...................G.....................G..........  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  L  G  F  I  R  T  T  A  Y  G  A  T  T  E  Y  A  A  S  V  E  D  R  L  T  I  S  R  D  
                    Query_12758  91   AGTGGTTAGGTTTCATAAGAACAACAGCTTATGGTGCGACAACAGAGTACGCCGCGTCTGTGGAGGACAGACTAACCATCTCAAGAGATG  180
V  91.8% (235/256)  IGHV3-49*04  137  .....G..........T....GC.A...........G.........A...............A.A.G....T.C................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><----------------CDR3-
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  T  R  D  R  L  A  L  
                    Query_12758  181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAGAGTGAAGACACAGCCGTGTATTATTGTACTAGAGATCGCTTGGCACTGG  270
V  91.8% (235/256)  IGHV3-49*04  227  ........................................A.CC..G.................C...........--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  88.9% (8/9)      IGHD6-19*01  8    -----------------------------------------------------------------------------------...G...  14

                                      IMGT--------------->                                  
                                      A  P  R  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12758  271  CTCCTCGTGCTTTCGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
D  88.9% (8/9)      IGHD6-19*01  15   ..----------------------------------------------------  16
J  97.9% (46/47)    IGHJ3*01     4    -------......T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_96370

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     1e-109
IGHD6-6*01                                                                                            14.1    9.3   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTC	ATTREQLVPIFDF	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	267	20	0	93


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  L  T  S  Y
                    Query_12759  1    GCAACTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGCAAGGGCTCTGGATATAGCTTAACCAGTTA  90
V  93.0% (267/287)  IGHV5-51*01  6    ...G........................................................T.....T........C.....T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  V  P  G  K  G  L  E  W  I  G  I  I  Y  P  A  D  S  E  T  K  Y  S  P
                    Query_12759  91   TTGGATCGCCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATTGGGATCATCTATCCTGCTGACTCTGAAACCAAATACAGCCC  180
V  93.0% (267/287)  IGHV5-51*01  96   C.......G.............A.........................G................G.........T....G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  S  S  S  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12759  181  GTCCTTCCAAGGCCAGGTCACCATCTCGGCCGACAAGTCCAGCAGCTCCGCCTTCTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.0% (267/287)  IGHV5-51*01  186  ...........................A.............T....A......A.C..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        I  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12759  271  CATATATTATTGTGCGACGACTAGAGAACAACTCGTCCCGATATTTGACTTCTGGGGGCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  93.0% (267/287)  IGHV5-51*01  276  ...G.....C.......---------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------.......A......C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_214080

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           304     1e-84
IGHD3-10*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	GACCAAGG	GGTTCGGGGACTTA	CTGCAGCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGACCAAGGGGTTCGGGGACTTACTGCAGCCCTTTGACCAC	VRTKGFGDLLQPFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	30	26	24	2	0	92.3
CDR1-IMGT	31	54	24	19	5	0	79.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	129	24	18	6	0	75
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	248	5	4	1	0	80
Total	N/A	N/A	244	219	25	0	89.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  E  T  S  G  F  T  L  S  S  S  T  M  N  W  V  R  Q  A  P  G  K  G  L  E  
                    Query_12760  5    CCCTGAGACTCTCCTGTGAAACCTCTGGATTCACCTTGAGTAGTTCCACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGT  94
V  89.8% (219/244)  IGHV3-21*01  50   ..................C.G................C.....C.AT.G.........................................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  A  S  I  T  S  G  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  
                    Query_12760  95   GGGTCGCATCTATTACTAGTGGAAGCACTTACATCTACTACGCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAACGCCAAGA  184
V  89.8% (219/244)  IGHV3-21*01  140  .....T....C....G....A.T..T.G......A........................C..............................  229
                                      W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><-----------------CDR3-IMGT----
                                      N  S  L  F  L  Q  L  S  G  L  R  V  E  D  T  A  V  Y  S  C  V  R  T  K  G  F  G  D  L  L  
                    Query_12760  185  ACTCACTGTTTCTGCAACTGAGTGGCCTGAGAGTCGAGGACACGGCTGTCTATTCCTGTGTGAGGACCAAGGGGTTCGGGGACTTACTGC  274
V  89.8% (219/244)  IGHV3-21*01  230  .........A.......A...ACA.........C...............G....A.....C...--------------------------  293
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  92.9% (13/14)    IGHD3-10*01  11   ------------------------------------------------------------------------..........G...----  24

                                      ------------->                                  
                                      Q  P  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12760  275  AGCCCTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  97.7% (43/44)    IGHJ4*02     5    ----.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_214081

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           304     1e-84
IGHD3-16*01                                                                                           12.2    33   
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	CTC	ATTACG	GCCTTTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGACTCATTACGGCCTTTGGACTACTTCACCTACGGTTTGGACGTC	ATDSLRPLDYFTYGLDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  D  F  G  M  H  W  V  R  Q  A  P  G  T  G  L  
                    Query_12761  1    GGTCCCTGAGACTCTCCTGTGCGGCCTCTGGATTCACCTTCGGTGACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCACGGGGCTGG  90
V  88.8% (222/250)  IGHV3-30*03  47   ......................A..................A..AG..A................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  D  D  T  Y  D  Q  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_12761  91   AATGGGTGGCACTTATATCATATGATGATACTTACGATCAGTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGATTCCA  180
V  88.8% (222/250)  IGHV3-30*03  137  .G.........G...............GA.G.A.TA.AT.C..........................................A......  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  V  F  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  F  C  A  T  D  S  L  R  P  L  D  
                    Query_12761  181  AGAACACGGTGTTTCTACAGATGAACAGTTTGAGACCTGAGGACACGGCTGTCTATTTCTGTGCGACAGACTCATTACGGCCTTTGGACT  270
V  88.8% (222/250)  IGHV3-30*03  227  ........C...A...G..A........CC.....G................G....A........G...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  9    -------------------------------------------------------------------------......-----------  14
J  93.2% (55/59)    IGHJ6*02     4    ---------------------------------------------------------------------------------------...  6

                                      GT-------------------->                                 
                                      Y  F  T  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12761  271  ACTTCACCTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  93.2% (55/59)    IGHJ6*02     7    ...A.TA.......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_214086

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD5-12*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTCAATTTGGTTCCGCAAA	TGGCTAC	CAGTC	CGGCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTCAATTTGGTTCCGCAAATGGCTACCAGTCCGGCATGGACGTC	ARFQFGSANGYQSGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  P  H  Y
                    Query_12762  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTAAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTCCCCACTA  90
V  97.6% (282/289)  IGHV5-51*03  6    ................................................G.................................A..AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  Y  P  A  D  S  D  T  R  Y  S  P
                    Query_12762  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGTTCATCTATCCTGCTGACTCTGATACCAGATACAGCCC  180
V  97.6% (282/289)  IGHV5-51*03  96   ....................................................A............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12762  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  ............................................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  F  Q  F  G  S  A  N  G  Y  Q  S  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_12762  271  CATGTATTACTGTGCGAGATTTCAATTTGGTTCCGCAAATGGCTACCAGTCCGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  97.6% (282/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD5-12*01  11   ---------------------------------------.......--------------------------------------------  17
J  97.8% (45/46)    IGHJ6*02     17   ---------------------------------------------------...T...................................  55

                                             
                                        S  S 
                    Query_12762  361  CTCCTCA  367
J  97.8% (45/46)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_214087

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           316     2e-88
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGGGATCCT	GCAGTGGC	GGCAATTGCTACGGGGAGGACAAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGGGATCCTGCAGTGGCGGCAATTGCTACGGGGAGGACAAT	ARDRGSCSGGNCYGEDN	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	10	1	0	90.9
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	50	1	0	98
CDR2-IMGT	102	125	24	22	2	0	91.7
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	232	217	15	0	93.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  I  F  S  T  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_12763  16   GTGCAGCCTCGGGATTCATCTTCAGTACCTATGCCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATAT  105
V  93.5% (217/232)  IGHV3-30*03  65   ..........T.......C........G.....G...G....................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  Y  D  G  N  N  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  S  K  S  T  V  F  L  
                    Query_12763  106  CATATGATGGAAATAATATATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGAGCACGGTGTTTCTGC  195
V  93.5% (217/232)  IGHV3-30*03  155  ............G.....A...............................................A........A....C...A.....  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------------CDR3-IMGT----------------
                                      Q  M  N  S  L  R  A  D  D  T  A  K  Y  Y  C  A  R  D  R  G  S  C  S  G  G  N  C  Y  G  E  
                    Query_12763  196  AAATGAACAGCCTGAGAGCTGACGACACGGCTAAATATTACTGTGCGAGAGATCGGGGATCCTGCAGTGGCGGCAATTGCTACGGGGAGG  285
V  93.5% (217/232)  IGHV3-30*03  245  ......................G.........GTG.................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (8/8)     IGHD6-19*01  8    ---------------------------------------------------------------........-------------------  15

                                      ---->                                  
                                      D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12763  286  ACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (34/34)   IGHJ4*02     15   -----..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_245037

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD2-8*02                                                                                            14.1    9.4   
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGT	TACTGGT	ACCAACGCCTC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTTACTGGTACCAACGCCTCCTACGGTCTGGACGTC	ARLVTGTNASYGLDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_12764  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAGCTA  90
V  98.3% (284/289)  IGHV5-51*03  6    .................................................................G........................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  R  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_12764  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGAGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ........G..................................T..............................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12764  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ...................................A.........C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  L  V  T  G  T  N  A  S  Y  G  L  D  V  W  G  Q  G  S  K  V  T  V  S  S
                    Query_12764  271  CATGTATTACTGTGCGAGACTGGTTACTGGTACCAACGCCTCCTACGGTCTGGACGTCTGGGGCCAAGGGAGCAAGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-8*02   10   ------------------------.......-----------------------------------------------------------  16
J  93.9% (46/49)    IGHJ6*02     14   ------------------------------------------.......A.....................C..C...............  61

                                       
                                       
                    Query_12764  361  A  361
J  93.9% (46/49)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_339447

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	72	2	0	97.3
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	111	3	0	97.4
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	295	282	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  F  L  K  I  S  C  K  G  S  G  Y  S  F  S  
                    Query_12765  4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTTTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTTCCA  93
V  95.6% (282/295)  IGHV5-51*01  2    ..G.............................................C.................................C...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  D  P  G  D  S  D  A  R  Y  
                    Query_12765  94   CTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACA  183
V  95.6% (282/295)  IGHV5-51*01  92   GC..C.......G.................................................T.................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_12765  184  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  95.6% (282/295)  IGHV5-51*01  182  ...........C.....................C........................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  
                    Query_12765  274  CCGCCATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  363
V  95.6% (282/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  85.7% (12/14)    IGHD1-26*01  4    ---------------------------------...G....A.....-------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------------......TA................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_12765  364  CGGTCACCGTCTCGTCA  380
J  94.7% (54/57)    IGHJ6*02     46   .............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_339444

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           249     3e-68
IGHD2-8*02                                                                                            16.1    2.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGATGCGGCGGAGTGAATTCGGC	ACTGGTGG	GG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATGCGGCGGAGTGAATTCGGCACTGGTGGGGACTTCTTTGACCAC	ARMRRSEFGTGGDFFDH	246	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	20	10	0	66.7
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	94	20	0	82.5
CDR3-IMGT (germline)	246	248	3	3	0	0	100
Total	N/A	N/A	245	202	43	0	82.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  L  R  S  V  S  F  L  W  S  W  V  R  Q  D  P  G  K  G  
                    Query_12766  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCCTGAGGAGTGTGTCTTTCCTCTGGAGCTGGGTCCGCCAGGACCCAGGGAAGGGCC  93
V  82.4% (202/245)  IGHV4-31*03  50   .....TCC...A.......................A.C..C....GTGG..A.TA..........A........C...............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  R  Y  Y  S  G  S  S  R  Y  N  P  S  L  G  S  R  V  S  M  S  L  D  T  S  
                    Query_12766  94   TGGAGTGGATTGGTTACAGGTATTACAGTGGAAGTAGTCGGTATAATCCGTCCCTCGGGAGTCGAGTTTCCATGTCACTAGACACGTCTA  183
V  82.4% (202/245)  IGHV4-31*03  140  .............G....TC...........G..C.CCTAC..C..C.........AA..........A....A...G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  Q  F  S  L  K  L  T  S  V  T  T  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  F  G  
                    Query_12766  184  GGAACCAATTTTCCCTGAAGTTGACCTCAGTGACGACCGCGGACACGGCCATCTATTACTGTGCGCGGATGCGGCGGAGTGAATTCGGCA  273
V  82.4% (202/245)  IGHV4-31*03  230  A......G..C.........C...G...T.....TG..............G.G............-------------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD2-8*02   11   -----------------------------------------------------------------------------------------.  11

                                      GT-------------------->                                  
                                      T  G  G  D  F  F  D  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_12766  274  CTGGTGGGGACTTCTTTGACCACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  330
D  100.0% (8/8)     IGHD2-8*02   12   .......--------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*02     1    ---------...A.......T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_339445

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           371     7e-105
IGHD2-15*01                                                                                           21.8    0.043 
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGGGTATTCTGTTGC	GGTGGTAGGTGCTA	GTG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGGGTATTCTGTTGCGGTGGTAGGTGCTAGTGACAACTGGTTCGACCCC	ARHGGYSVAVVGASDNWFDP	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  I  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_12767  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATAGTATTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  97.2% (244/251)  IGHV4-39*01  49   .........................................C.G.....G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12767  91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  97.2% (244/251)  IGHV4-39*01  139  ..........................................................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  V  S  L  K  L  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  H  G  G  Y  S  V  A 
                    Query_12767  181  AAGAATCAGGTCTCCCTGAAGCTGAGCTCTATGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATGGCGGGTATTCTGTTGCG  270
V  97.2% (244/251)  IGHV4-39*01  229  .....C...T....................G........................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD2-15*01  14   -----------------------------------------------------------------------------------------.  14

                                      DR3-IMGT------------------------>                                  
                                       V  V  G  A  S  D  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12767  271  GTGGTAGGTGCTAGTGACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  337
D  92.9% (13/14)    IGHD2-15*01  15   .......C.....------------------------------------------------------  27
J  100.0% (51/51)   IGHJ5*02     1    ----------------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_339442

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD2-21*01                                                                                           12.2    33   
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	T	GCATACTGT	AATATCATCAACTGCTCCCCGCGGGAAGGTG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATGCATACTGTAATATCATCAACTGCTCCCCGCGGGAAGGTGTTGACTTC	AKDAYCNIINCSPREGVDF	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  Y  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_12768  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTTAGCTACTATGCCATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-23*01  47   ....................................CC......AG...........GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  D  G  N  T  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_12768  91   AGTGGGTCTCAAGTATTAGTGGCAGTGATGGTAACACATATTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  92.0% (230/250)  IGHV3-23*01  137  ...........GC.........T....G.....G......C..............................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  M  Y  H  C  A  K  D  A  Y  C  N  I  I  
                    Query_12768  181  AGAACACGCTGTATCTGCAGATGAATAGCCTGAGAGTCGAGGACACGGCCATGTATCACTGTGCGAAGGATGCATACTGTAATATCATCA  270
V  92.0% (230/250)  IGHV3-23*01  227  ...................A.....C..........C.............G.A...T..........A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  88.9% (8/9)      IGHD2-21*01  2    -----------------------------------------------------------------------.....T...----------  10

                                      -IMGT----------------------->                                  
                                      N  C  S  P  R  E  G  V  D  F  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_12768  271  ACTGCTCCCCGCGGGAAGGTGTTGACTTCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  333
J  95.2% (40/42)    IGHJ4*02     7    ---------------------......A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_339443

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           358     4e-101
IGHD3-16*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CACTCAATCGAGGACTCCG	TGCTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACTCAATCGAGGACTCCGTGCTTATTACTTTGATCAT	ATLNRGLRAYYFDH	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	97	17	0	85.1
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	258	29	0	89.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  R  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  A  T  H
                    Query_12769  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGAGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACAGTTTTGCCACACA  90
V  89.9% (258/287)  IGHV5-51*03  6    ..............................A......G............................T...........C...A...GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  T  D  S  E  T  H  Y  S  P
                    Query_12769  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTACTGACTCTGAAACCCACTACAGCCC  180
V  89.9% (258/287)  IGHV5-51*03  96   ............................................................T...GG.........T...AGA........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  R  S  I  T  T  A  Y  L  Q  W  N  T  L  R  A  A  D  P  A
                    Query_12769  181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACAGATCCATCACTACCGCCTACCTGCAGTGGAACACATTGAGGGCCGCGGACCCCGC  270
V  89.9% (258/287)  IGHV5-51*03  186  ........A..........................AG.......GC...................G..GCC...A....T.....A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  T  L  N  R  G  L  R  A  Y  Y  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12769  271  CATATATTACTGCGCGACACTCAATCGAGGACTCCGTGCTTATTACTTTGATCATTGGGGCCAGGGAACCCTGGTCACAGTCTCCTCAG  359
V  89.9% (258/287)  IGHV5-51*03  276  ...G........T....------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                          
D  100.0% (7/7)     IGHD3-16*01  28   ------------------------------------.......----------------------------------------------  34
J  91.3% (42/46)    IGHJ4*02     3    -------------------------------------------........CT.C.......................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_245031

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           388     5e-110
IGHD6-25*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTC	ARQSSAGRTKYGMDV	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	65	6	0	91.5
CDR1-IMGT	78	101	24	17	7	0	70.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	292	270	22	0	92.5


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  R  S  S  G  Y  D  F  L  D  
                    Query_12770  7    TGCAGCTGGTGCAGTCTGGAGCAGAGCTAAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGAGTTCTGGGTACGACTTTCTCGACT  96
V  92.5% (270/292)  IGHV5-51*01  5    ..........................G.G..A.....C.........................A.G.......A...AG....AC.AG..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  
                    Query_12770  97   ACTGGATCGTCTGGGTGCGCCAAATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGTC  186
V  92.5% (270/292)  IGHV5-51*01  95   .........G............G..........................................................G......C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  
                    Query_12770  187  CGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGCGCAGTCTGAAGGCCTCGGACACCG  276
V  92.5% (270/292)  IGHV5-51*01  185  ..............................C...............C..................A....C...................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------CDR3-IMGT----------------->                               
                                      A  K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  
                    Query_12770  277  CCAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCT  366
V  92.5% (270/292)  IGHV5-51*01  275  ...T..................--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD6-25*01  7    -----------------------.......------------------------------------------------------------  13
J  100.0% (48/48)   IGHJ6*02     15   --------------------------------------------..............................................  60

                                        
                                      S 
                    Query_12770  367  CA  368
J  100.0% (48/48)   IGHJ6*02     61   ..  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_245030

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            363     1e-102
IGHD4-17*01                                                                                           23.8    0.011 
IGHJ2*01                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	CGAGACCTCTG	TACGGTGACTAC	TT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATACGAGACCTCTGTACGGTGACTACTTCTGGTACTTCGATCTC	AKDTRPLYGDYFWYFDL	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	252	10	10	0	0	100
Total	N/A	N/A	252	242	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12771  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  96.0% (242/252)  IGHV3-9*01   47   .....................C....................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  E  I  V  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12771  91   AGTGGGTCTCAGGTATTAGTTGGAATAGTGGTGAAATTGTCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (242/252)  IGHV3-9*01   137  ................................AGC..A.G..................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  L  N  T  L  T  A  E  D  T  A  F  Y  Y  C  A  K  D  T  R  P  L  Y  G  
                    Query_12771  181  AGAACTCCCTGTATCTGCAACTGAACACTCTGACAGCTGAGGACACGGCCTTCTATTACTGTGCAAAAGATACGAGACCTCTGTACGGTG  270
V  96.0% (242/252)  IGHV3-9*01   227  ....................A......G.....G..................G...................------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (12/12)   IGHD4-17*01  5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                      D  Y  F  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_12771  271  ACTACTTCTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  327
D  100.0% (12/12)   IGHD4-17*01  12   .....----------------------------------------------------  16
J  100.0% (50/50)   IGHJ2*01     4    -------..................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_200841

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           410     1e-116
IGHD6-25*01                                                                                           12.2    35    
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TT	AGCGGC	GAAGGTAACCTTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTAGCGGCGAAGGTAACCTTATTGACTAC	AKLSGEGNLIDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	276	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  R  Y
                    Query_12772  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCAGGTA  90
V  95.2% (276/290)  IGHV5-51*01  6    ..................................................................T....................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  Y  D  V  R  Y  R  P
                    Query_12772  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTATGATGTGAGATACAGACC  180
V  95.2% (276/290)  IGHV5-51*01  96   .......................................................................C....ACC........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  P  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12772  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGCCCATCAGCACCGCCTTTTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.2% (276/290)  IGHV5-51*01  186  ...................................A.T...............ACC..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  K  L  S  G  E  G  N  L  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12772  271  CATTTATTACTGTGCGAAACTTAGCGGCGAAGGTAACCTTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  95.2% (276/290)  IGHV5-51*01  276  ...G.............G..---------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (6/6)     IGHD6-25*01  10   ----------------------......-------------------------------------------------------  15
J  100.0% (42/42)   IGHJ4*02     7    -----------------------------------------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_288140

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGATGGCCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTC	VRQSSDGRTKYGMDV	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	72	2	0	97.3
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	110	4	0	96.5
CDR3-IMGT (germline)	291	298	8	7	1	0	87.5
Total	N/A	N/A	295	281	14	0	95.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  
                    Query_12773  4    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCA  93
V  95.3% (281/295)  IGHV5-51*01  2    ....G...................................C.......................................AG........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  T  G  L  E  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  
                    Query_12773  94   GTTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGTGGATGGGGATCATCTTTCCGGATGACTCTGATACCAGATACA  183
V  95.3% (281/295)  IGHV5-51*01  92   .C..................................A..........................A...T.G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_12773  184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACA  273
V  95.3% (281/295)  IGHV5-51*01  182  ................................................G.....................C...................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                           
                                      T  A  K  Y  Y  C  V  R  Q  S  S  D  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_12773  274  CCGCCAAGTATTATTGTGTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  362
V  95.3% (281/295)  IGHV5-51*01  272  ......T......C....C......----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                   
J  100.0% (42/42)   IGHJ6*02     15   -----------------------------------------------..........................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_200843

Length=413
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         430     1e-122
IGHD6-6*01                                                                                            23.8    0.013 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CACAATTCCTC	TATAGCAGCTCG	GCCCCAATTAGCG	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACAATTCCTCTATAGCAGCTCGGCCCCAATTAGCGACTCCTACTACTACAATATGGACGTC	ATQFLYSSSAPISDSYYYNMDV	290	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	76	72	70	2	0	97.2
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	112	2	0	98.2
CDR3-IMGT (germline)	290	293	4	4	0	0	100
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  T  F  T  N 
                    Query_12774    5    GTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAAC  94
V  97.6% (282/289)  IGHV5-10-1*01  4    ..G.....G......................................................................G........G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  D  Y  S 
                    Query_12774    95   TACTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGAATTGATCCTAGTGACTCTTATACCGACTACAGC  184
V  97.6% (282/289)  IGHV5-10-1*01  94   ........................................................G........................A........  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  S 
                    Query_12774    185  CCGTCCTTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCATCAGCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACTCC  274
V  97.6% (282/289)  IGHV5-10-1*01  184  .......................................................................................A..  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><----------------------------CDR3-IMGT--------------------------->         
                                         A  M  Y  Y  C  A  T  Q  F  L  Y  S  S  S  A  P  I  S  D  S  Y  Y  Y  N  M  D  V  W  G  Q 
                    Query_12774    275  GCCATGTATTACTGTGCGACACAATTCCTCTATAGCAGCTCGGCCCCAATTAGCGACTCCTACTACTACAATATGGACGTCTGGGGCCAA  364
V  97.6% (282/289)  IGHV5-10-1*01  274  ...................-----------------------------------------------------------------------  292
                                         A  M  Y  Y  C  A                                                                         
D  100.0% (12/12)   IGHD6-6*01     4    ------------------------------............------------------------------------------------  15
J  94.9% (56/59)    IGHJ6*02       4    -------------------------------------------------------...A..........GG...................  38

                                                                
                                         G  T  T  V  T  V  S  S 
                    Query_12774    365  GGGACCACGGTCACCGTCTCCTCA  388
J  94.9% (56/59)    IGHJ6*02       39   ........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40498920


Query= Query_200842

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           41.1    7e-08
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TT	TATTACTATGACAGTAGTGGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTATTACTATGACAGTAGTGGTTATTTTGACTAC	ARLYYYDSSGYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  N  S  Y  W  G  W  I  R  Q  P  P  G  M  G 
                    Query_12775  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGCAGTAATTCCTACTGGGGCTGGATCCGCCAGCCCCCAGGGATGGGG  90
V  93.6% (234/250)  IGHV4-39*01  49   ............................................T....G..A................................A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  S  S  S  G  Y  T  Y  Y  N  P  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_12775  91   CTGGAGTGGATTGGGAGTATCTCTTCTAGTGGGTACACCTATTACAACCCGTCCCTCAAGAGTCGAATCACCATATCCGTGGACACGTCC  180
V  93.6% (234/250)  IGHV4-39*01  139  ......................A..A.......AG......C........................G.............A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  V  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  Y  Y  Y  D  S  S 
                    Query_12775  181  AAGAACCAGGTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGACTTTATTACTATGACAGTAGT  270
V  93.6% (234/250)  IGHV4-39*01  229  .........T.........A......C..............A...........G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.8% (23/24)    IGHD3-22*01  2    ------------------------------------------------------------------------...........T......  19

                                      -------------->                                  
                                       G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12775  271  GGTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
D  95.8% (23/24)    IGHD3-22*01  20   ......-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_200844

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD4-17*01                                                                                           14.1    8.4  
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGAATAC	AG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGAATACAGCAACTGGGTCGACCCC	ARDSGEYSNWVDP	250	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	135	27	19	2	6	70.4
FR3-IMGT	136	249	114	105	9	0	92.1
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	233	18	6	90.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  V  S  S  G  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_12776  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCGTCAGCAGTGGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGG  90
V  90.7% (233/257)  IGHV4-61*01  49   ...................C...........G.............................G...........................A  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  H  I  Y  N  Y  N  R  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D 
                    Query_12776  91   CTGGAGTGGATCGGTCATATCTATAACTATAACAGAGGGAGCACCAATTATAATCCCTCCCTCCAAAGTCGAGTCACCATATCAGTAGAC  180
V  90.7% (233/257)  IGHV4-61*01  139  ...........T..GT........T..------..T...........C..C..C.........A.G........................  222
                                       L  E  W  I  G  Y  I  Y  Y        S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------CDR3-I
                                       T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  G  E  Y 
                    Query_12776  181  ACATCCAAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATTCCGGTGAATAC  270
V  90.7% (233/257)  IGHV4-61*01  223  ..G........................C...G...........................G.................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  90.0% (9/10)     IGHD4-17*01  7    --------------------------------------------------------------------------------......C...  16

                                      MGT-------------->                                  
                                       S  N  W  V  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12776  271  AGCAACTGGGTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  98.0% (49/50)    IGHJ5*02     2    --.......T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_200846

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           330     1e-92
IGHD6-13*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  A  L  E 
                    Query_12777  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGCACTGGAG  90
V  93.1% (228/245)  IGHV4-59*08  49   ...........................................G......................................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  F  Y  T  G  T  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12777  91   TGGATCGGGTCTATCTTTTACACTGGGACCACCAACTACGACCCCTCTCTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGAAC  180
V  93.1% (228/245)  IGHV4-59*08  139  .....T....A.....A.....G.....G..........A.......C....................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  V  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  H  R  A  A  A  G  P 
                    Query_12777  181  CAGTTCTCCCTGAGAGTGACCTCTCTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATCCCCATAGAGCAGCAGCTGGCCCC  270
V  93.1% (228/245)  IGHV4-59*08  229  .............AGC...G....G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD6-13*01  7    --------------------------------------------------------------------------............----  18
J  93.2% (41/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_12777  271  TTTGACAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  313
J  93.2% (41/44)    IGHJ4*02     6    ......T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_200849

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD1-20*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              48.8    7e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-20*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTAGCGGCCGTG	GGTATAAC	GCTGGTTCTACCG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTAGCGGCCGTGGGTATAACGCTGGTTCTACCGGGTTCGCCCGC	ARDPSGRGYNAGSTGFAR	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  N  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12778  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGTAATTTCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G...........G..A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  S  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S 
                    Query_12778  91   TGGATTGGGTATATCCATTACAGTGGCATTACCAACTCCAACCCCTCCCTCAAGAGCCGGGCCTCCATCTCAGTAGACACATCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ...............T..........G.GC.......A..................T..A.T.A....A...........G.......A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  R  P  V  T  A  A  A  A  A  V  Y  Y  C  A  R  D  P  S  G  R  G  Y  N  A 
                    Query_12778  181  CAGTTCTCCCTGAAACTGAGGCCTGTGACCGCTGCGGCCGCGGCCGTTTATTACTGTGCGAGAGATCCTAGCGGCCGTGGGTATAACGCT  270
V  91.4% (224/245)  IGHV4-59*01  229  ..............G.....CT...............A.A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD1-20*01  1    -------------------------------------------------------------------------------........---  8

                                      -------------------->                                
                                       G  S  T  G  F  A  R  W  G  Q  R  A  L  V  T  S  S  S
                    Query_12778  271  GGTTCTACCGGGTTCGCCCGCTGGGGCCAGCGAGCCCTGGTCACCTCCTCCTC  323
J  86.0% (37/43)    IGHJ5*02     7    ----------......A..C..........G..A...........GT......  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_288142

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           366     2e-103
IGHD2-15*01                                                                                           14.1    9.2   
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCACGTGG	GGATATT	TAGATAAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGATATTTAGATAAG	ARDLTWGYLDK	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	262	28	0	90.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  P  E  V  K  Q  P  G  A  S  V  K  V  S  C  R  A  S  G  Y  T  F  T  T  F 
                    Query_12779  2    CAGCTGGTGCAGTCTGGACCTGAGGTGAAGCAGCCTGGGGCCTCAGTTAAGGTCTCCTGCAGGGCTTCTGGGTACACCTTTACCACCTTT  91
V  90.3% (262/290)  IGHV1-18*01  7    ..................G...........A................G.............A.........T.............G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  L  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  S  G  D  T  K  Y  A  Q 
                    Query_12779  92   GGCATCAACTGGCTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAGTGGTGACACAAAGTACGCACAG  181
V  90.3% (262/290)  IGHV1-18*01  97   ..T....G....G......................................T......G.G......A....A.......C..T......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  V  Q  G  R  V  T  L  T  T  D  T  A  T  S  T  A  Y  M  D  L  K  S  L  R  S  D  D  T  A 
                    Query_12779  182  AAAGTCCAGGGCAGAGTCACCCTGACCACAGACACAGCCACGAGCACAGCCTACATGGACCTAAAGAGCCTAAGATCTGACGACACGGCC  271
V  90.3% (262/290)  IGHV1-18*01  187  ..GC.................A..............T......................G..G.G......G..................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       M  Y  F  C  A  R  D  L  T  W  G  Y  L  D  K  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_12779  272  ATGTATTTCTGCGCGAGAGATCTCACGTGGGGATATTTAGATAAGTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  350
V  90.3% (262/290)  IGHV1-18*01  277  G......A...T........-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
D  100.0% (7/7)     IGHD2-15*01  2    ------------------------------.......------------------------------------------  8
J  97.1% (33/34)    IGHJ4*02     15   ---------------------------------------------............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_179351

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           374     8e-106
IGHD6-19*01                                                                                           12.2    35    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	GCTCCAG	GGCTGG	GATT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCCAGGGCTGGGATTCTTTGACTAT	AAPGLGFFDY	291	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	68	7	0	90.7
CDR1-IMGT	78	101	24	18	6	0	75
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	105	9	0	92.1
CDR3-IMGT (germline)	291	293	3	3	0	0	100
Total	N/A	N/A	291	265	26	0	91.1


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  A  S  G  N  T  L  T 
                    Query_12780  3    CAGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCGTCAGTGAAAGTTGCCTGCAAGGCATCCGGAAACACCCTCACC  92
V  91.1% (265/291)  IGHV1-46*01  1    .....G........G........G.......................C........G...T.............T...T.....T.....  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  N  F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  N  K  T  T  Y 
                    Query_12780  93   AACAACTTCATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTAATAAGACAACCTAT  182
V  91.1% (265/291)  IGHV1-46*01  91   .G.T...AT..................................................................GG..GC....G...C  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  L  T  M  T  R  V  T  S  T  R  T  V  Y  M  E  L  S  N  L  R  S  E  D 
                    Query_12780  183  GCACAGAAGTTCCAGGGCAGACTGACCATGACTAGGGTCACGTCCACGAGAACAGTCTACATGGAGCTGAGCAACCTGAGATCTGAGGAC  272
V  91.1% (265/291)  IGHV1-46*01  181  .....................G.C........C....A............C......................G................  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------CDR3-IMGT--------->                                  
                                       T  A  V  Y  Y  C  A  A  P  G  L  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_12780  273  ACGGCCGTGTATTACTGCGCGGCTCCAGGGCTGGGATTCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  354
V  91.1% (265/291)  IGHV1-46*01  271  .................T...-------------------------------------------------------------  291
                                       T  A  V  Y  Y  C  A                                                              
D  100.0% (6/6)     IGHD6-19*01  13   ----------------------------......------------------------------------------------  18
J  95.5% (42/44)    IGHJ4*02     5    --------------------------------------.........C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_223954

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           364     5e-103
IGHD2-15*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              60.3    2e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGC	ATTGTAATGGT	CACAGGTGTTGGGG	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGCATTGTAATGGTCACAGGTGTTGGGGCGTC	ARDRHCNGHRCWGV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12781  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAACAACTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (240/247)  IGHV3-53*01  47   .............................................G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  I  Y  S  G  G  T  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  
                    Query_12781  91   AGTGGGTCTCACTTATTTATAGCGGTGGTACCACACACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGA  180
V  97.2% (240/247)  IGHV3-53*01  137  ...........G..................G....T...................................................A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  R  H  C  N  G  H  R  
                    Query_12781  181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGATAGGCATTGTAATGGTCACAGGT  270
V  97.2% (240/247)  IGHV3-53*01  227  .................................C.................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  90.9% (10/11)    IGHD2-15*01  6    ------------------------------------------------------------------------......G....-------  16

                                      ---------->                                 
                                      C  W  G  V  W  G  Q  G  S  T  V  S  V  S  S 
                    Query_12781  271  GTTGGGGCGTCTGGGGCCAAGGGTCCACGGTCTCCGTCTCCTCA  314
J  94.6% (35/37)    IGHJ6*02     26   -------................A........A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_111102

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           12.2    30   
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTGGC	GGCTGG	CTTAC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTGGCGGCTGGCTTACGGACGTC	TRGGGWLTDV	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	215	28	0	88.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_12782  4    CCCTGAGACTCTCCTGCACTGTCTCTGGAGGCTCCATCAGTGGCTTCTACTGGAGCTGGATTCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  88.5% (215/243)  IGHV4-59*01  50   .....TCC...A................T............A.T.A...............C............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  N  I  H  Y  S  G  H  T  N  Y  N  P  S  L  R  S  R  V  I  I  S  L  D  T  S  N  N  
                    Query_12782  94   GGATTGGGAATATCCACTACAGTGGGCACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCATCATATCGCTGGACACGTCCAACAACC  183
V  88.5% (215/243)  IGHV4-59*01  140  ........T.....T.T.........AG.......................A...........C......AG.A...........G....  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------CDR3-IMGT--------->    
                                      Q  I  S  L  K  V  N  S  G  T  A  A  D  T  A  L  Y  Y  C  T  R  G  G  G  W  L  T  D  V  W  
                    Query_12782  184  AGATCTCCCTGAAGGTGAACTCTGGGACCGCTGCGGACACGGCCCTCTATTATTGTACGAGAGGTGGCGGCTGGCTTACGGACGTCTGGG  273
V  88.5% (215/243)  IGHV4-59*01  230  ..T...........C...G.....T...................G.G.....C...G......---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD6-19*01  13   --------------------------------------------------------------------......----------------  18
J  100.0% (40/40)   IGHJ6*02     23   -------------------------------------------------------------------------------...........  33

                                                                   
                                      G  Q  G  T  T  V  T  V  S  S 
                    Query_12782  274  GCCAAGGGACCACGGTCACCGTCTCCTCA  302
J  100.0% (40/40)   IGHJ6*02     34   .............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_223957

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12783  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12783  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_12783  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12783  271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_223950

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           335     4e-94
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GGG	CTATGCTTCGGGGAGTCATT	TCAAATCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGGGCTATGCTTCGGGGAGTCATTTCAAATCTCACTTTGACTAC	AKEGYASGSHFKSHFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  G  M  H  W  V  R  Q  T  P  G  Q  G  L  
                    Query_12784  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAGTTATGGCATGCACTGGGTCCGCCAGACTCCAGGCCAGGGACTGG  90
V  92.8% (232/250)  IGHV3-30*18  47   ...........................................T..C........................G........A....G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  V  S  S  D  G  S  V  Q  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12784  91   AGTGGCTGGCAGTTGTATCAAGTGATGGAAGTGTTCAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCC  180
V  92.8% (232/250)  IGHV3-30*18  137  .....G........A.....TA..........AA.A.....................................................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      Q  N  T  L  Y  L  Q  M  N  S  L  R  S  E  D  T  A  A  Y  Y  C  A  K  E  G  Y  A  S  G  S  
                    Query_12784  181  AGAACACGCTGTATCTGCAAATGAATAGCCTGAGATCTGAGGATACGGCTGCTTATTACTGTGCGAAAGAGGGCTATGCTTCGGGGAGTC  270
V  92.8% (232/250)  IGHV3-30*18  227  .........................C.........G.......C.......TG.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (18/20)    IGHD3-10*01  7    -------------------------------------------------------------------------.....G..........T  23

                                      GT-------------------->                                  
                                      H  F  K  S  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12784  271  ATTTCAAATCTCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  90.0% (18/20)    IGHD3-10*01  24   ...------------------------------------------------------  26
J  100.0% (45/45)   IGHJ4*02     4    ------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_223952

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12785  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_12785  91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_12785  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12785  271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_42818

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           353     9e-100
IGHD6-19*01                                                                                           25.7    0.003 
IGHJ1*01                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTTGTC	CAGTGGCTGGTAC	ACT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTTGTCCAGTGGCTGGTACACTTACTTCCAGTAT	ARGLSSGWYTYFQY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  A 
                    Query_12786  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGGAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGCA  90
V  95.2% (238/250)  IGHV4-61*01  49   ....................................G..........T........................................G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  S  G  T  A  F  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S 
                    Query_12786  91   CTGGAGTGGATTGGGTATATCTATAACAGTGGGACCGCCTTCTATAACCCCTCCCTCAGGAGCCGAGTCACCATATCAGTAGACACGTCC  180
V  95.2% (238/250)  IGHV4-61*01  139  ........................T.........G.A..AA...C.............A...T...........................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  S  S  G  W  Y 
                    Query_12786  181  AAGAACCAGTTCTCCCTGAACCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGTTGTCCAGTGGCTGGTAC  270
V  95.2% (238/250)  IGHV4-61*01  229  ....................G.................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD6-19*01  9    -----------------------------------------------------------------------------.............  21

                                      -------------->                                  
                                       T  Y  F  Q  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12786  271  ACTTACTTCCAGTATTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  319
J  95.7% (44/46)    IGHJ1*01     7    ---.........C.C..................................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_42817

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12787  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12787  91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*01  139  ........GT........T.......G...............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_12787  181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.5% (234/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12787  271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_73839

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           392     2e-111
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ1*01                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGAGTGGCCAC	AGCAGCAGCTGGT	GGACAT	CTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGAGTGGCCACAGCAGCAGCTGGTGGACATCTGAGTACTTCCAGGAG	ARMSGHSSSWWTSEYFQE	292	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	71	3	0	95.9
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	104	10	0	91.2
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	272	21	0	92.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  P  
                    Query_12788  5    AGATGCAGCTGGTGCAGTCTGGAGCAGAGCTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTCCCCA  94
V  92.8% (272/293)  IGHV5-51*03  2    ..G..........................G....A..................................................TA...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  H  W  I  G  W  V  R  Q  T  P  G  K  G  L  E  W  M  G  L  I  Y  P  D  D  S  D  T  R  Y  
                    Query_12788  95   GCCATTGGATCGGCTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGACTCATCTATCCTGATGACTCTGATACCAGATACA  184
V  92.8% (272/293)  IGHV5-51*03  92   ..T.C......................T...........................GA............G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  K  G  Q  V  T  I  S  V  D  K  S  I  N  T  A  F  L  R  W  A  S  L  K  A  S  D  
                    Query_12788  185  GCCCGTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAACACCGCCTTCCTGCGCTGGGCCAGCCTGAAGGCCTCGGACA  274
V  92.8% (272/293)  IGHV5-51*03  182  ...........C.....................C..............G........A.....AG...AG....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------------CDR3-IMGT--------------------->                   
                                      S  G  M  Y  Y  C  A  R  M  S  G  H  S  S  S  W  W  T  S  E  Y  F  Q  E  W  G  Q  G  T  L  
                    Query_12788  275  GCGGCATGTATTACTGTGCGAGAATGAGTGGCCACAGCAGCAGCTGGTGGACATCTGAGTACTTCCAGGAGTGGGGCCAGGGCACCCTGG  364
V  92.8% (272/293)  IGHV5-51*03  272  C..C...................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (13/13)   IGHD6-13*01  7    -----------------------------------.............------------------------------------------  19
J  92.2% (47/51)    IGHJ1*01     2    ------------------------------------------------------....A.........C.C...................  37

                                                     
                                      V  S  V  S  S  
                    Query_12788  365  TCTCCGTCTCCTCAG  379
J  92.2% (47/51)    IGHJ1*01     38   ..A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_42815

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           315     5e-88
IGHD3-10*01                                                                                           23.8    0.010
IGHJ4*01                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-10*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	TGG	TCGGGGAGTTAT	C	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGTGGTCGGGGAGTTATCGACTAC	ASGRGVIDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	224	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  K  T  H  G  M  V  W  V  R  Q  A  P  G  K  G  L  
                    Query_12789  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAAAACCCATGGCATGGTCTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.7% (224/247)  IGHV3-30*03  47   ..........................................GT.G.T........CA................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  L  Y  D  G  S  N  Q  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12789  91   AGTGGGTGGCAGCAATTTTATATGATGGAAGTAATCAACACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  90.7% (224/247)  IGHV3-30*03  137  ............TT..A.C................A..T...................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      N  N  T  L  F  L  Q  M  S  S  L  R  T  D  D  T  G  L  Y  Y  C  A  S  G  R  G  V  I  D  Y  
                    Query_12789  181  ACAACACCCTGTTTCTGCAAATGAGCAGCCTGAGAACTGACGACACGGGATTATATTACTGTGCAAGTGGTCGGGGAGTTATCGACTACT  270
V  90.7% (224/247)  IGHV3-30*03  227  .G.....G....A...........A..........G....G.......CTG.G...........G..-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (12/12)   IGHD3-10*01  14   ----------------------------------------------------------------------............--------  25
J  100.0% (40/40)   IGHJ4*01     9    -----------------------------------------------------------------------------------.......  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12789  271  GGGGCCAAGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (40/40)   IGHJ4*01     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_111108

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           338     5e-95
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGATGGA	ATTACTAT	CAAACGAAGCA	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCGATGGAATTACTATCAAACGAAGCAATGGTTTTGATATA	TRGDGITIKRSNGFDI	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  G  S  S  Y  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_12790  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCGGTAGCAGCTACATGGCTTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  93.9% (231/246)  IGHV3-53*01  47   .........................................A......A.......AGC......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_12790  91   AGTGGGTCTCAGTTATTTACAGCGGTGGTACCACATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGG  180
V  93.9% (231/246)  IGHV3-53*01  137  ...................T..........G........A.................................................A  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      D  T  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  L  Y  Y  C  T  R  G  D  G  I  T  I  K  R  
                    Query_12790  181  ACACGCTGTATCTTCAAATGCACAGCCTGAGAGCCGACGACACGGCCCTGTACTACTGTACGAGAGGCGATGGAATTACTATCAAACGAA  270
V  93.9% (231/246)  IGHV3-53*01  227  ....................A................G.........G....T......G......------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  3    --------------------------------------------------------------------------........--------  10

                                      ---------------->                                  
                                      S  N  G  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12790  271  GCAATGGTTTTGATATATGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  321
J  93.8% (45/48)    IGHJ3*02     3    ---...C.........C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_223959

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         322     2e-90
IGHD3-22*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	TCACCCAC	TGATAGTA	ATAATAT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGATCACCCACTGATAGTAATAATATC	ARSPTDSNNI	241	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	226	20	0	91.9


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  V  G  S  G  Y  Y  W  G  W  I  R  Q  S  P  G  K  G  L 
                    Query_12791    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCGTCGGCAGTGGTTATTACTGGGGCTGGATCCGGCAGTCCCCAGGGAAGGGGCTG  90
V  91.9% (226/246)  IGHV4-38-2*01  49   ....................................A..A..........C.....................C.................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  A  T  I  H  H  S  G  S  T  H  Y  N  P  S  L  K  S  R  V  L  I  S  I  D  T  S  M 
                    Query_12791    91   GAGTGGATTGCGACTATCCATCATAGTGGCAGCACCCACTACAACCCGTCCCTCAAGAGTCGAGTTCTTATATCAATAGACACGTCCATG  180
V  91.9% (226/246)  IGHV4-38-2*01  139  ..........G..G....T..........G......T............................CACC......G............A.  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------CDR3-IMGT--------->
                                         N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  S  P  T  D  S  N  N  I 
                    Query_12791    181  AACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCATTTATTACTGTGCAAGATCACCCACTGATAGTAATAATATC  270
V  91.9% (226/246)  IGHV4-38-2*01  229  ................A......C........................G.G...........G...------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD3-22*01    10   --------------------------------------------------------------------------........--------  17
J  97.1% (34/35)    IGHJ4*02       14   -----------------------------------------------------------------------------------------.  14

                                                                          
                                         W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_12791    271  TGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  304
J  97.1% (34/35)    IGHJ4*02       15   ................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_42811

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            382     3e-108
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTATTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12792  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_12792  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  98.8% (247/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  H  C  A  R  E  K  T  A  A  V  V  
                    Query_12792  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATCACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  98.8% (247/250)  IGHV3-7*01   227  ........................................................T.............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12792  271  TTGACTATTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  94.9% (56/59)    IGHJ6*02     4    ---....C..C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_73838

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_12793  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*01  49   .......................................AG..G.T..................................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       R  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_12793  91   CGGATTGGATATATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  93.0% (227/244)  IGHV4-59*01  139  T.......G...................G.....A............................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W 
                    Query_12793  181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGG  270
V  93.0% (227/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------------------------------------------....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_12793  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (35/35)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_189894

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           329     3e-92
IGHD3-16*01                                                                                           18.0    0.64 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	RDGGVMVSLMHLIS	274	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	66	67	61	5	1	91
CDR1-IMGT	67	90	24	17	7	0	70.8
FR2-IMGT	91	141	51	50	1	0	98
CDR2-IMGT	142	165	24	23	1	0	95.8
FR3-IMGT	166	273	114	95	13	6	83.3
CDR3-IMGT (germline)	274	279	6	6	0	0	100
Total	N/A	N/A	286	252	27	7	88.1


Alignments

                                      <----------------------------FR1-IMGT-----------------------------><-------CDR1-IMGT------
                                        Q  V  Q   L  V  Q  R  *  K  S  R  G  S  L  *  R  S  P  V  R  A  L  D  T  I  S  P  V  I  
                    Query_12794  1    GCAGGTGCAG-CTGGTGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCCGTTATTG  89
V  88.1% (252/286)  IGHV5-51*03  9    ..T.......T....A....................................T.....A....T..........GC..TA..A.C..C..  98
                                        L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W

                                      ><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-------------
                                      G  S  V  G  C  A  R  C  P  G  K  A  W  S  G  W  G  S  S  I  L  M  T  L  I  P  D  T  V  R  
                    Query_12794  90   GATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGTCCGGC  179
V  88.1% (252/286)  IGHV5-51*03  99   ......C.......................................................G.....................C...T.  188
                                        I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                      P  S  R  A  R  S  P  S  Q  S  R  S  P        *  S  T  C  S  G  E  G  *  R  P  R  T  L  P  
                    Query_12794  180  CTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------AGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACACTGCCAT  263
V  88.1% (252/286)  IGHV5-51*03  189  ....C.A...................C...C........CAGCACC.C...............C..C.................C.....  278
                                        F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M

                                      ---------><----------------CDR3-IMGT--------------->                                  
                                      Y  I  T  A  R  D  G  G  V  M  V  S  L  M  H  L  I  S  G  A  K  G  H  W  S  P  S  L  Q 
                    Query_12794  264  ATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  349
V  88.1% (252/286)  IGHV5-51*03  279  G........T......----------------------------------------------------------------------  294
                                        Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD3-16*01  18   -----------------........T...---------------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    ------------------------------------......T......G.................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_189895

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	274	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_12795  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  95.1% (274/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_12795  91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  95.1% (274/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_12795  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  95.1% (274/288)  IGHV5-51*01  186  ...............G.........................T.........................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12795  271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  95.1% (274/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_189897

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           369     2e-104
IGHD5-18*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              44.9    1e-08 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-18*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGTCTGG	GTGGATACCACTATG	TT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGAGGTCTGGGTGGATACCACTATGTTCTTTGACGCC	TREVWVDTTMFFDA	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  *  A  P  G  K  G  L  
                    Query_12796  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCTAGGCTCCAGGCAAGGGGCTGG  90
V  97.2% (243/250)  IGHV3-33*01  47   ....................................................................C.....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  W  Y  D  G  S  K  K  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12796  91   AGTGGGTGGCATTTATATGGTATGATGGAAGTAAAAAAAACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  97.2% (243/250)  IGHV3-33*01  137  ...........G......................T...T...................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  A  E  A  T  A  V  Y  Y  C  T  R  E  V  W  V  D  T  T  
                    Query_12796  181  AGAACACGCTGTATCTGCAAATGAGCAGCCTGAGAGCCGAGGCCACGGCTGTGTATTACTGTACGAGAGAGGTCTGGGTGGATACCACTA  270
V  97.2% (243/250)  IGHV3-33*01  227  ........................A.................A...................G.......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD5-18*01  1    -----------------------------------------------------------------------------........AG...  13

                                      ------------->                                  
                                      M  F  F  D  A  R  G  P  G  P  L  F  T  V  P  S  
                    Query_12796  271  TGTTCTTTGACGCCAGGGGCCCGGGACCCCTGTTCACCGTCCCCTCAG  318
D  86.7% (13/15)    IGHD5-18*01  14   ..----------------------------------------------  15
J  84.1% (37/44)    IGHJ4*02     5    ----.......TA.T......A....A.....G........T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_189890

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           357     1e-100
IGHD3-22*01                                                                                           14.1    8.4   
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGA	TATGATGGTA	ATGATAAAGC	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGATATGATGGTAATGATAAAGCTGCTTTTGACATC	AREGYDGNDKAAFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12797  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGAGATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-48*03  47   ....................................................A.....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  T  T  G  G  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12797  91   AGTGGATTTCATATATTAGTACTACTGGTGGTACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (239/250)  IGHV3-48*03  137  .....G.......C.......G..G....A............................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  G  Y  D  G  N  D  
                    Query_12797  181  AGAACTCACTATTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTGCGAGAGAGGGATATGATGGTAATGATA  270
V  95.6% (239/250)  IGHV3-48*03  227  ..........G.A.....................................G.......C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-22*01  8    --------------------------------------------------------------------------......A...------  17

                                      ---------------->                                  
                                      K  A  A  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_12797  271  AAGCTGCTTTTGACATCTGGGGCCAAGGGACAATGGTCATCGTCTCTTCAG  321
J  95.7% (45/47)    IGHJ3*02     4    ----.........T.........................C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_189891

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           403     1e-114
IGHD3-16*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATGTCACC	TGGGGG	TATTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATGTCACCTGGGGGTATTCTGACTAC	ARYVTWGYSDY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	273	15	0	94.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y 
                    Query_12798  2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCACCTAT  91
V  94.8% (273/288)  IGHV1-18*01  7    ...................C.................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  T  Y  N  H  N  T  H  F  A  Q 
                    Query_12798  92   GCCATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACTTACAATCATAACACACACTTTGCACAG  181
V  94.8% (273/288)  IGHV1-18*01  97   .GT....G..................................................G.G........GG.......A...A.......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_12798  182  AAACTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGTACCGCCTACATGGAACTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.8% (273/288)  IGHV1-18*01  187  ..G.........................................C..A...........G..............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  Y  V  T  W  G  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12798  272  GTGTATTACTGTGCGAGATATGTCACCTGGGGGTATTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  94.8% (273/288)  IGHV1-18*01  277  ..................-------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD3-16*01  17   ---------------------------......----------------------------------------------  22
J  100.0% (41/41)   IGHJ4*02     8    --------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_189892

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           341     5e-96
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGATGGA	ATTACTAT	CAAACGAAGCA	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGCGATGGAATTACTATCAAACGAAGCAATGGTTTTGATATA	TRGDGITIKRSNGFDI	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  S  Y  M  A  W  V  R  Q  A  P  G  R  R  L  
                    Query_12799  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGGCTTGGGTCCGCCAGGCTCCAGGGAGGAGGCTGG  90
V  94.3% (232/246)  IGHV3-53*01  47   ................................................A.......AGC......................A.G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_12799  91   AGTGGGTCTCAGTTATTTACAGCGGTGGTACCACATACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.3% (232/246)  IGHV3-53*01  137  ...................T..........G........A..................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------CDR3-IMGT--
                                      N  T  L  Y  L  Q  M  H  S  L  R  A  D  D  T  A  L  Y  Y  C  T  R  G  D  G  I  T  I  K  R  
                    Query_12799  181  ACACGCTGTATCTTCAAATGCACAGCCTGAGAGCCGACGACACGGCCCTGTACTACTGTACGAGAGGCGATGGAATTACTATCAAACGAA  270
V  94.3% (232/246)  IGHV3-53*01  227  ....................A................G.........G....T......G......------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  3    --------------------------------------------------------------------------........--------  10

                                      ---------------->                                  
                                      S  N  G  F  D  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12799  271  GCAATGGTTTTGATATATGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  321
J  93.8% (45/48)    IGHJ3*02     3    ---...C.........C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_189893

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           357     1e-100
IGHD2-2*01                                                                                            16.1    2.3   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCCAGCACGTTATTTATGTGGTTCCC	GCTGCTAT	TTAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCCCAGCACGTTATTTATGTGGTTCCCGCTGCTATTTATTTTGACTAC	ARAQHVIYVVPAAIYFDY	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_12800  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.6% (239/250)  IGHV4-31*01  49   .............................................................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  D  I  Y  N  S  G  T  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  L  D  A  S 
                    Query_12800  91   CTGGAGTGGATTGGGGACATCTATAACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCTAGTCACCATATCACTAGACGCGTCT  180
V  95.6% (239/250)  IGHV4-31*01  139  ...............T........T.........G.................................T.........G.....A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  N  Q  F  S  L  Q  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  Q  H  V  I  Y  V 
                    Query_12800  181  AAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGCGAGCCCAGCACGTTATTTATGTG  270
V  95.6% (239/250)  IGHV4-31*01  229  ..................A......G..............................T.........A...--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      -IMGT--------------------->                                 
                                       V  P  A  A  I  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_12800  271  GTTCCCGCTGCTATTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  330
D  100.0% (8/8)     IGHD2-2*01   21   ------........----------------------------------------------  28
J  100.0% (42/42)   IGHJ4*02     6    ------------------..........................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_288147

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTCC	ATAGTGCTTACGAGTAC	GGGAAAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCTCCATAGTGCTTACGAGTACGGGAAATTGGTTCGACCCC	ASSIVLTSTGNWFDP	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	226	15	0	93.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  L  S  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_12801  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCCTCAGTAGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.8% (226/241)  IGHV4-59*01  50   .....TCC...A....C..................A..................G.........G.........................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  E  S  R  V  A  I  S  L  D  T  S  K  N  
                    Query_12801  94   GGATTGGGTATATCTATTACAGTGGAACCACCAACTACAATCCCTCCCTCGAGAGTCGAGTCGCCATATCTTTAGACACGTCCAAGAACC  183
V  93.8% (226/241)  IGHV4-59*01  140  .........................G.G............C.........A...........A.......AG..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  S  I  V  L  T  S  T  G  N  
                    Query_12801  184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGCTCCATAGTGCTTACGAGTACGGGAAATT  273
V  93.8% (226/241)  IGHV4-59*01  230  .............................................................-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  82.4% (14/17)    IGHD5-12*01  7    -----------------------------------------------------------------......GC.....T...--------  23
J  100.0% (46/46)   IGHJ5*02     6    -----------------------------------------------------------------------------------------.  6

                                      ---------->                                  
                                      W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12801  274  GGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (46/46)   IGHJ5*02     7    .............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_189898

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         353     9e-100
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGCACTAT	TATGCTAGCAGTGGTTATT	T	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGCACTATTATGCTAGCAGTGGTTATTTCTACTTTGACTAC	ARGHYYASSGYFYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_12802    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  95.6% (237/248)  IGHV4-30-4*01  49   ..................A..............................A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  R  I  Y  Y  N  G  R  T  Y  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12802    91   CTGGAGTGGATTGGGCGCATCTATTACAATGGGAGGACCTATTACAGCCCGTCCCTCAAGAGTCGAGTTACCATATCAGTGGACACGTCC  180
V  95.6% (237/248)  IGHV4-30-4*01  139  ...............TA...........G......C.....C....A.................................A.........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                         K  N  Q  F  S  L  M  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  Y  Y  A  S  S 
                    Query_12802    181  AAGAACCAGTTCTCCCTGATGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTTCTGTGCCAGGGGGCACTATTATGCTAGCAGT  270
V  95.6% (237/248)  IGHV4-30-4*01  229  ...................A......................................A.........----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  89.5% (17/19)    IGHD3-22*01    8    ------------------------------------------------------------------------------....A...T...  19

                                        GT------------------>                                  
                                         G  Y  F  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12802    271  GGTTATTTCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  89.5% (17/19)    IGHD3-22*01    20   .......------------------------------------------------  26
J  100.0% (47/47)   IGHJ4*02       2    --------...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_189899

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           357     1e-100
IGHD6-19*01                                                                                           31.5    5e-05 
IGHJ5*02                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GATCCTC	TAGCAGTGGCTGGTAC	CT	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGATCCTCTAGCAGTGGCTGGTACCTCAACTGGTTCGACCCC	ARGSSSSGWYLNWFDP	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	236	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12803  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTACTGGAGCTGGATTCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  96.7% (236/244)  IGHV4-59*01  49   ...............................G..............................C...........A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  F  I  Y  Y  T  G  S  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12803  91   TGGATTGGGTTTATCTATTACACTGGGAGCGCCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  96.7% (236/244)  IGHV4-59*01  139  ..........A...........G.......A...........................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  S  S  S  G  W  Y  L 
                    Query_12803  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGGATCCTCTAGCAGTGGCTGGTACCTC  270
V  96.7% (236/244)  IGHV4-59*01  229  ............................................................A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (16/16)   IGHD6-19*01  6    -----------------------------------------------------------------------................---  21
J  100.0% (50/50)   IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12803  271  AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (50/50)   IGHJ5*02     3    .................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_139509

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD3-22*01                                                                                           21.8    0.041
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCGTAAAGGG	GGTTATTACTA	T	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCGTAAAGGGGGTTATTACTATCTACTACTACTACAATATGGACGTC	ARTVKGVITIYYYYNMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	231	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12804  1    ACCCTGTCCCTCACCTGCGCCGTCTATGGTGGGTCTTTCAGTGGTTACTACTGGACTTGGATCCGCCAACCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (231/243)  IGHV4-34*01  49   ....................T..............C...................GC...........G.....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  L  S  G  R  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_12804  91   TGGATTGGCGAAATCAATCTTAGTGGAAGAACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAT  180
V  95.1% (231/243)  IGHV4-34*01  139  ........G..........A.........C..........................................G................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  I  Y 
                    Query_12804  181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAACCGTAAAGGGGGTTATTACTATCTAC  270
V  95.1% (231/243)  IGHV4-34*01  229  .............A.................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (11/11)   IGHD3-22*01  20   --------------------------------------------------------------------------...........-----  30
J  96.6% (56/58)    IGHJ6*02     5    --------------------------------------------------------------------------------------....  8

                                      -------------------->                                 
                                       Y  Y  Y  N  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12804  271  TACTACTACAATATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  96.6% (56/58)    IGHJ6*02     9    .........GG...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_76790

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           294     6e-82
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	AGGGGAAGAA	TATGAT	CAGACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGAAGGGGAAGAATATGATCAGACTTTTGACTAC	AREGEEYDQTFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	12	12	0	50
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  D  Y  Y  M  A  W  I  R  Q  A  P  G  K  G  L  
                    Query_12805  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACTGACTACTACATGGCCTGGATACGTCAGGCTCCAGGGAAGGGGCTGG  90
V  87.6% (219/250)  IGHV3-11*01  47   ..........................................G.............AG......C..C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  T  T  T  T  K  I  G  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_12805  91   AGTGGATTTCATACATTACTACTACCACCAAGATCGGATACTACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCCGGGACGACGCCA  180
V  87.6% (219/250)  IGHV3-11*01  137  .....G............G..G..GTGGT.GT.C.AT...........................A............A.....A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      T  S  S  V  F  L  L  M  S  S  L  R  D  E  D  T  A  V  Y  F  C  A  R  E  G  E  E  Y  D  Q  
                    Query_12805  181  CGAGCTCAGTGTTTCTGCTAATGAGCAGCCTGAGAGACGAGGACACGGCCGTGTATTTCTGTGCCAGGGAAGGGGAAGAATATGATCAGA  270
V  87.6% (219/250)  IGHV3-11*01  227  A..A....C...A.....A.....A...........C....................A......G..A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  5    --------------------------------------------------------------------------------......----  10

                                      ---------->                                  
                                      T  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12805  271  CTTTTGACTACTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  315
J  97.7% (42/43)    IGHJ4*02     6    --..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_288149

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_12806  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_12806  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_12806  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_12806  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_126839

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCT	TTACTATGATAGTAGTGCTTA	CTATGCCTCTTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCTTTACTATGATAGTAGTGCTTACTATGCCTCTTTCTACGTTCTGGACGTC	ARELYYDSSAYYASFYVLDV	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  T  V  S  L  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_12807  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCACCGTCAGTCTTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  93.2% (233/250)  IGHV4-61*01  50   .....TCC...A....C...............T.......CAG...............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  V  Y  F  N  G  N  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  
                    Query_12807  94   TGGAGTGGATTGGGTATGTCTATTTCAATGGGAACACCAATTACAACCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCCA  183
V  93.2% (233/250)  IGHV4-61*01  140  .................A......A..G.....G......C........................G........................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  L  Y  Y  D  S  S  
                    Query_12807  184  AGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGAGCTTTACTATGATAGTAGTG  273
V  93.2% (233/250)  IGHV4-61*01  230  ....................C...............................G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  95.2% (20/21)    IGHD3-22*01  4    -------------------------------------------------------------------------.................  20

                                      R3-IMGT------------------------>                                 
                                      A  Y  Y  A  S  F  Y  V  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12807  274  CTTACTATGCCTCTTTCTACGTTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  338
D  95.2% (20/21)    IGHD3-22*01  21   G...-------------------------------------------------------------  24
J  95.9% (47/49)    IGHJ6*02     14   ----------------.....G.A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_36784

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           294     6e-82
IGHD2-21*01                                                                                           19.9    0.16 
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-21*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTGTTCCAAT	TGGTGGTTATTGGTAT	CCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTGTTCCAATTGGTGGTTATTGGTATCCCTTCGATCCC	ARDRVPIGGYWYPFDP	255	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	254	126	105	9	12	83.3
CDR3-IMGT (germline)	255	262	8	8	0	0	100
Total	N/A	N/A	262	227	23	12	86.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12808  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTCAGTACTTATAGTATGCACTGGGTCCGCCAGGCTCCGGGCAAGGGGCTGG  90
V  86.6% (227/262)  IGHV3-30*04  47   .....................................C.......GC...GC........................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  A  Y  D  G  N  T  Y  Y  A  D  S  Y  Y  A  D  S  V  K  G  R  F  T  I  S  
                    Query_12808  91   AGTGGGTGGCAGTTATTGCATATGATGGCAATACATACTACGCAGACTCCTACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCA  180
V  86.6% (227/262)  IGHV3-30*04  137  ................AT..........A.G..ATA.A...------------.......................A.............  214
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y              Y  A  D  S  V  K  G  R  F  T  I  S  

                                      -------FR3-IMGT----------------------------------------------------------><---------------
                                      R  D  N  S  R  D  T  L  Y  L  Q  M  N  R  L  R  P  E  D  T  A  V  Y  Y  C  A  R  D  R  V  
                    Query_12808  181  GAGACAATTCCAGGGACACCCTCTATCTGCAAATGAACCGCCTGAGACCTGAGGACACCGCTGTCTATTACTGTGCGAGAGATCGTGTTC  270
V  86.6% (227/262)  IGHV3-30*04  215  ............A.A....G..G...............A........G..........G.....G.................--------  296
                                      R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R           

                                      ----CDR3-IMGT------------------>                                  
                                      P  I  G  G  Y  W  Y  P  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12808  271  CAATTGGTGGTTATTGGTATCCCTTCGATCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  87.5% (14/16)    IGHD2-21*01  10   ----.......G....C...----------------------------------------------  25
J  97.7% (42/43)    IGHJ5*02     9    -----------------------.....C.....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_36785

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           324     8e-91
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  A  S  G  A  S  V  S  H  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_12809  1    ACCCTGTCCCTCACCTGCATTGCCTCTGGTGCCTCCGTCAGTCATTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  92.2% (226/245)  IGHV4-59*02  49   ...................C..T........G..........AG.........................C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_12809  91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCGGTAGACACGTCCAAGAGC  180
V  92.2% (226/245)  IGHV4-59*02  139  ........G......T..........G.GC.............................A.T......A..A................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  L  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_12809  181  CAGTTCTCCCTGAAGCTGAGCTCTCTGACCGCTGCGGACGCGGCCGTGTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.2% (226/245)  IGHV4-59*02  229  ........................G..............A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12809  271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_36780

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           402     3e-114
IGHD1-26*01                                                                                           12.2    36    
IGHJ3*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCCCTGCGTTCCC	AGTGGG	CCTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGACCCCTGCGTTCCCAGTGGGCCTTTGATGCTATTGATATC	VRPLRSQWAFDAIDI	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	295	6	4	2	0	66.7
Total	N/A	N/A	293	275	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  E  N  S  F  T  
                    Query_12810  3    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGAAAACAGCTTTACCA  92
V  93.9% (275/293)  IGHV5-51*03  2    ....G.....G................................................................G.T............  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  G  W  I  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  S  P  G  D  S  D  T  R  Y  
                    Query_12810  93   ACTACTGGATCGGCTGGATACGCCAGATGCCCGGGAAAGGCCTCGAGTGGATGGGGTTCATCTCTCCTGGTGACTCTGATACCAGATACA  182
V  93.9% (275/293)  IGHV5-51*03  92   G................G.G.......................G............A......A..........................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  V  S  A  D  R  S  I  T  T  A  Y  L  Q  W  N  S  L  K  A  S  D  
                    Query_12810  183  GCCCGTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAGGTCCATCACCACCGCCTACCTGCAGTGGAACAGCCTGAAGGCCTCGGACA  272
V  93.9% (275/293)  IGHV5-51*03  182  ..........................A............A........G....................G....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  V  Y  Y  C  V  R  P  L  R  S  Q  W  A  F  D  A  I  D  I  W  G  Q  G  T  M  V  T  V  
                    Query_12810  273  CCGCTGTGTATTACTGTGTGCGACCCCTGCGTTCCCAGTGGGCCTTTGATGCTATTGATATCTGGGGCCAAGGGACAATGGTCACCGTCT  362
V  93.9% (275/293)  IGHV5-51*03  272  ....CA............C.A..-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD1-26*01  6    ------------------------------------......------------------------------------------------  11
J  98.0% (49/50)    IGHJ3*02     1    ----------------------------------------------.......T....................................  44

                                            
                                      S  S  
                    Query_12810  363  CTTCAG  368
J  98.0% (49/50)    IGHJ3*02     45   ......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_36783

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           324     7e-91
IGHD1-1*01                                                                                            10.3    113  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATAAG	GACGGCGGGCGT	TGGAA	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ATAAGGACGGCGGGCGTTGGAAAC	IRTAGVGN	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	247	5	3	2	0	60
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  S  F  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12811  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGTAGTTTCTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  91.9% (227/247)  IGHV3-74*01  47   ....................................C.........C.A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  S  S  D  G  S  S  R  N  Y  A  D  S  V  K  G  R  V  T  I  S  R  D  N  A  
                    Query_12811  91   TGTGGGTCTCACGTATTAGTAGTGATGGGAGTAGTAGAAACTACGCGGACTCCGTGAAGGGCCGAGTCACCATCTCCAGAGACAACGCCA  180
V  91.9% (227/247)  IGHV3-74*01  137  ..................A...............C.C..G.........................T........................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      K  N  T  V  Y  L  Q  M  N  N  L  R  G  E  D  T  G  V  Y  Y  C  I  R  T  A  G  V  G  N  W  
                    Query_12811  181  AGAACACGGTCTATTTGCAAATGAATAACTTGAGAGGCGAGGACACGGGTGTGTATTATTGTATAAGGACGGCGGGCGTTGGAAACTGGG  270
V  91.9% (227/247)  IGHV3-74*01  227  ........C.G...C..........C.GTC......C...........C.........C...GC...-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD1-1*01   9    -------------------------------------------------------------------------------.....------  13
J  100.0% (36/36)   IGHJ4*02     13   ------------------------------------------------------------------------------------......  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_12811  271  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  300
J  100.0% (36/36)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_126834

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           335     4e-94
IGHD3-22*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCCCA	TATTATTATGACACTAGTGGTTATTA	TCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCCCATATTATTATGACACTAGTGGTTATTATCAGGCCTTTGACTTC	ARDGPYYYDTSGYYQAFDF	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12812  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGATATGGAATGAACTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-48*03  47   ..............................................T....A...............C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  P  S  D  D  S  I  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_12812  91   AGTGGATTTCATACATTAGTCCTAGTGATGACAGCATATACTACGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  92.8% (232/250)  IGHV3-48*03  137  .....G..............AG.....G.AGT.C..................T..................A..................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      N  K  L  L  S  L  Q  M  N  S  L  R  A  E  D  T  G  V  Y  Y  C  A  R  D  G  P  Y  Y  Y  D  
                    Query_12812  181  ACAAATTACTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGGTGTTTATTACTGTGCGAGAGATGGCCCATATTATTATGACA  270
V  92.8% (232/250)  IGHV3-48*03  227  .G..C.C.....A...................................C.....................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.5% (23/26)    IGHD3-22*01  2    -----------------------------------------------------------------------------.....C.....T.  14

                                      -IMGT----------------------->                                  
                                      T  S  G  Y  Y  Q  A  F  D  F  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_12812  271  CTAGTGGTTATTATCAGGCCTTTGACTTCTGGGGCCAGGGATCCCTGGTCATCGTCTCCTCAG  333
D  88.5% (23/26)    IGHD3-22*01  15   G............--------------------------------------------------  27
J  93.2% (41/44)    IGHJ4*02     5    -------------------........A.............A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_76799

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           311     4e-87
IGHD6-13*01                                                                                           14.1    8.6  
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-13*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGCGTTCACACTGT	CTGGTAC	GG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCGCGTTCACACTGTCTGGTACGGCTACTACGCTATGGACGTC	AKDRVHTVWYGYYAMDV	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	21	5	0	80.8
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	126	24	20	4	0	83.3
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	247	223	24	0	90.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  A  F  S  D  Y  G  M  H  W  A  R  Q  A  P  G  K  R  L  Q  
                    Query_12813  2    CCCTGTCCCTCACCTGCGCAGCCTCTGGATTCGCCTTCAGTGACTATGGCATGCACTGGGCCCGCCAGGCTCCGGGCAAGAGGCTGCAGT  91
V  90.3% (223/247)  IGHV3-30*18  50   .....AGA...T....T...............A........AG.................T............A......G.....G...  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  F  I  S  Y  D  E  T  T  I  Y  Y  A  D  S  V  K  G  *  F  T  I  S  R  D  N  S  K  
                    Query_12813  92   GGGTGTCATTTATATCATATGATGAAACTACTATATACTATGCAGACTCCGTGAAGGGCTGATTCACCATCTCCAGAGACAATTCGAAGA  181
V  90.3% (223/247)  IGHV3-30*18  140  .....G..G...............G..G..A..A.........................C.........................C....  229
                                      W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------------CDR3-IMGT-
                                      N  T  L  F  L  Q  L  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  R  V  H  T  V  W  Y  
                    Query_12813  182  ACACGCTGTTTCTGCAACTGAACAGCCTGAGACCTGAGGACACGGCTGTCTATTACTGTGCGAAAGACCGCGTTCACACTGTCTGGTACG  271
V  90.3% (223/247)  IGHV3-30*18  230  .........A.......A..............G................G.................-----------------------  296
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                          
D  100.0% (7/7)     IGHD6-13*01  15   ----------------------------------------------------------------------------------.......-  21

                                      ------------------->                                 
                                      G  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12813  272  GCTACTACGCTATGGACGTCTGGGGCCAAGGCACCACGGTCACCGTCTCCTCA  324
J  96.2% (50/52)    IGHJ6*02     11   -........G.....................G.....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_159806

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           364     5e-103
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTCGCGCGAG	TACTATGATACTACTGGT	CG	TGATC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTCGCGCGAGTACTATGATACTACTGGTCGTGATCCTTTTGATATC	ARVSREYYDTTGRDPFDI	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  H  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12814  1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCACCTTCAGTCACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-33*01  47   ....................G.......................AG..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12814  91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  96.8% (241/249)  IGHV3-33*01  137  ......................................................................................T...  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  Q  M  N  S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  V  S  R  E  Y  Y  D  
                    Query_12814  181  AGAACACGTTGTATCTGCAAATGAACAGCCTGGGAGCCGAGGACACGGCTGTATATTACTGTGCGAGAGTTTCGCGCGAGTACTATGATA  270
V  96.8% (241/249)  IGHV3-33*01  227  ........C.......................A...................G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      IMGT--------------------->                                  
                                      T  T  G  R  D  P  F  D  I  W  G  Q  G  T  I  L  T  V  S  S  
                    Query_12814  271  CTACTGGTCGTGATCCTTTTGATATCTGGGGCCAAGGGACAATACTCACCGTCTCTTCAG  330
D  88.9% (16/18)    IGHD3-22*01  15   G..G....----------------------------------------------------  22
J  94.0% (47/50)    IGHJ3*02     1    ----------....G............................GG...............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_168623

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           364     5e-103
IGHD1-26*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAC	ATAGTGGGAGCTA	GGGCCGACC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACATAGTGGGAGCTAGGGCCGACCTTGACTAC	ARHIVGARADLDY	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	245	239	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  T  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12815  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTACCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTAG  90
V  97.6% (239/245)  IGHV3-53*01  47   .............................................G..........................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_12815  91   AGTGGGTCTCAGTTATTTATAGTGGTGGTAACACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  97.6% (239/245)  IGHV3-53*01  137  ......................C.......G...........................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------CDR3-IMGT-------
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  H  I  V  G  A  R  A  D  
                    Query_12815  181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAGACACATAGTGGGAGCTAGGGCCGACC  270
V  97.6% (239/245)  IGHV3-53*01  227  ...............................................G.G...............-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (13/13)   IGHD1-26*01  4    --------------------------------------------------------------------.............---------  16

                                      ------->                                  
                                      L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12815  271  TTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (42/42)   IGHJ4*02     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_159804

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12816  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12816  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_12816  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12816  271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_126836

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           380     1e-107
IGHD3-16*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACAAGCGGGCGGCACC	TTTGGGG	CGAGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTAC	ARGQAGGTFGASDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  S  F  N  D  Y 
                    Query_12817  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAATGAAGGTCTCCTGCAAGGCTTCCGGTTACAGCTTTAACGACTAT  91
V  92.0% (266/289)  IGHV1-18*01  7    .............................................G......................T.......C.....C.AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  M  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  A  Y  N  G  N  T  K  Y  S  E 
                    Query_12817  92   GGTATCACTTGGATGCGACAGGCCCCTGGACAGGGGCCTGAGTGGATGGGATGGATCAGCGCATATAATGGTAACACAAAGTATTCAGAG  181
V  92.0% (266/289)  IGHV1-18*01  97   .......GC...G...................A....T........................T..C..............C...G..C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  L  Q  G  R  L  I  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_12817  182  AGGCTCCAGGGCAGACTCATCATGACCACAGACACATCCACGAGCACAGCCTACATGGAATTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.0% (266/289)  IGHV1-18*01  187  .A.............G...C.......................................GC.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  G  Q  A  G  G  T  F  G  A  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12817  272  GTCTATTATTGTGCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  92.0% (266/289)  IGHV1-18*01  277  ..G.....C..........---------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD3-16*01  15   ------------------------------------.......---------------------------------------------  21
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_159802

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           380     1e-107
IGHD3-10*01                                                                                           44.9    5e-09 
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTT	GTATTACTTTGGTTCGGGGAGTTATT	CG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTGTATTACTTTGGTTCGGGGAGTTATTCGGACTAC	ARSLYYFGSGSYSDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	246	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  N  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12818  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTAACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (246/249)  IGHV4-31*03  49   ...................................................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  A  S 
                    Query_12818  91   CTGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACGCGTCT  180
V  98.8% (246/249)  IGHV4-31*03  139  ...............T....................................................................A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  L  Y  Y  F  G  S 
                    Query_12818  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGATCCTTGTATTACTTTGGTTCG  270
V  98.8% (246/249)  IGHV4-31*03  229  .....................................................................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  96.2% (25/26)    IGHD3-10*01  1    --------------------------------------------------------------------------........A.......  16

                                      ----------------->                                  
                                       G  S  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12818  271  GGGAGTTATTCGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  96.2% (25/26)    IGHD3-10*01  17   ..........------------------------------------------  26
J  100.0% (40/40)   IGHJ4*02     9    ------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_159803

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           360     1e-101
IGHD3-3*01                                                                                            14.1    8.4   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	237	7	0	97.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_12819  4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  97.1% (237/244)  IGHV4-34*01  50   .....TCC...A....................................A.........................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N  
                    Query_12819  94   GGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAACC  183
V  97.1% (237/244)  IGHV4-34*01  140  ........................................................................T.................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V  
                    Query_12819  184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCG  273
V  97.1% (237/244)  IGHV4-34*01  230  ..............................................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          
D  100.0% (7/7)     IGHD3-3*01   9    --------------------------------------------------------------------------------.......---  15

                                      ------------->                                  
                                      A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12819  274  CCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (43/43)   IGHJ4*02     6    -----...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_159800

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           364     5e-103
IGHD3-10*01                                                                                           14.1    8.1   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTA	GGG	CGGGGAG	AGGGGG	CTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGGGCGGGGAGAGGGGGCTTGGACTAC	RAGRGGLDY	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	249	1	1	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_12820  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  96.8% (241/249)  IGHV3-73*01  47   .........A................................................................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  H  I  R  S  I  S  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_12820  91   AGTGGGTTGGCCATATTAGAAGCATCTCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATG  180
V  96.8% (241/249)  IGHV3-73*01  137  ............G...........AAG...............................................................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  E  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  R  A  G  R  G  G  L  
                    Query_12820  181  ATTCAGAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTCTATTATTGTAGGGCGGGGAGAGGGGGCTTGG  270
V  96.8% (241/249)  IGHV3-73*01  227  .....A....................................................G.....C....---------------------  295
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  100.0% (7/7)     IGHD3-10*01  15   ------------------------------------------------------------------------.......-----------  21
J  97.7% (43/44)    IGHJ4*02     5    -------------------------------------------------------------------------------------...T.  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12820  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.7% (43/44)    IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_159801

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           335     4e-94
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_12821  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.9% (229/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12821  91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCC  180
V  93.9% (229/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C.................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  P  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_12821  181  AAGAACCAGTTCTCCCTGAACCCGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  93.9% (229/244)  IGHV4-39*01  229  ....................G.T..G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12821  271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_168628

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           339     2e-95
IGHD4-17*01                                                                                           19.9    0.16 
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGAG	GTT	CTACGGTGAC	AACATAGGGGGATA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGGTTCTACGGTGACAACATAGGGGGATATGATGCTTTTGATATT	TRFYGDNIGGYDAFDI	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12822  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGGTTCGCCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGG  90
V  93.9% (232/247)  IGHV3-33*01  47   ...............................A...A.........G.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  F  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12822  91   AGTGGGTGGCAGTTATTTGGTTTGATGGAAGTAATAAGTATTATGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAATTCCA  180
V  93.9% (232/247)  IGHV3-33*01  137  ................A....A...............A..C.......................A.........................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  T  R  F  Y  G  D  N  I  G  
                    Query_12822  181  AGAATACACTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTTCTGTACGAGGTTCTACGGTGACAACATAGGGG  270
V  93.9% (232/247)  IGHV3-33*01  227  ....C..G....A.......................................G....A....G....-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD4-17*01  4    ----------------------------------------------------------------------..........----------  13

                                      T------------------>                                  
                                      G  Y  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12822  271  GATATGATGCTTTTGATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
J  98.0% (49/50)    IGHJ3*02     1    ----...............C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_168629

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           386     1e-109
IGHD6-19*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CCGCGGA	GGGTATAGCAGTGGCTGGTAC	GGTCCGTCCCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACCGCGGAGGGTATAGCAGTGGCTGGTACGGTCCGTCCCTCTTTGACTAC	ARHRGGYSSGWYGPSLFDY	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	249	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_12823  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  99.2% (249/251)  IGHV4-39*01  49   ....................................A.....................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12823  91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  99.2% (249/251)  IGHV4-39*01  139  ..........................................................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  R  G  G  Y  S  S 
                    Query_12823  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACACCGCGGAGGGTATAGCAGT  270
V  99.2% (249/251)  IGHV4-39*01  229  .....................................................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (21/21)   IGHD6-19*01  1    ------------------------------------------------------------------------------............  12

                                      3-IMGT----------------------->                                  
                                       G  W  Y  G  P  S  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12823  271  GGCTGGTACGGTCCGTCCCTCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  100.0% (21/21)   IGHD6-19*01  13   .........-------------------------------------------------------  21
J  100.0% (44/44)   IGHJ4*02     5    --------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_159808

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12824  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  G  N  A  
                    Query_12824  91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGGCAACGCCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A..................................A........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_12824  181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12824  271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_126830

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            343     2e-96
IGHD1-26*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	G	AGTGGGA	TGGCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGAGTGGGATGGCTCCCTGACTAC	VGGVGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  I  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12825  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCATTAGTGACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-7*01   47   ....................................C.T.....AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  E  K  D  G  S  E  K  N  Y  V  N  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12825  91   AGTGGGTGGCCAACATAGAGAAAGATGGAAGTGAGAAAAACTATGTGAACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (234/249)  IGHV3-7*01   137  .................A..C.................T........G..........................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  L  Y  Y  C  V  G  G  V  G  W  L  P  D  
                    Query_12825  181  AGAACTCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTCTGTATTACTGTGTGGGAGGAGTGGGATGGCTCCCTGACT  270
V  94.0% (234/249)  IGHV3-7*01   227  ...................A...A............C.............G............C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  6    ----------------------------------------------------------------------.......-------------  12
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12825  271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_269813

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           347     7e-98
IGHD3-9*01                                                                                            14.1    8.1  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TTTGACT	TGAAACC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTGACTTGAAACCCTACTTTGACTAC	ARFDLKPYFDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  I  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12826  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACGTTCATTAATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-48*03  47   ............................T........C....G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  G  S  G  S  L  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12826  91   AGTGGGTTTCATACATTAGTGGAAGTGGTAGTCTCACATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (235/248)  IGHV3-48*03  137  ....................A.T.........AC..T.....................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  S  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  F  D  L  K  P  Y  F  
                    Query_12826  181  AGAGCTCTCTCTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTTCTGTGCGAGATTTGACTTGAAACCCTACTTTG  270
V  94.8% (235/248)  IGHV3-48*03  227  ...A...A..G..............................................A..........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-9*01   13   --------------------------------------------------------------------.......---------------  19
J  97.9% (46/47)    IGHJ4*02     2    ----------------------------------------------------------------------------------........  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_12826  271  ACTACTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  309
J  97.9% (46/47)    IGHJ4*02     10   .....................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_126833

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           316     2e-88
IGHD2-21*02                                                                                           16.1    2.3  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACCCTACGATCTTGCAATCGACTACGA	TGGTGACT	CCGAAACGACT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGAACCCTACGATCTTGCAATCGACTACGATGGTGACTCCGAAACGACTTTTGACTAC	TREPYDLAIDYDGDSETTFDY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  D  F  S  R  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12827  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCGACTTCAGTCGTTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGC  90
V  90.4% (226/250)  IGHV3-48*03  47   ....................G..............AC.......A........................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  S  Y  I  S  S  R  G  S  V  V  K  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12827  91   AGTGGGTCTCGTACATCAGTAGTAGGGGAAGTGTCGTAAAGCACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  90.4% (226/250)  IGHV3-48*03  137  .......T..A.....T........T..T...AC.A..T.CT......................A.........................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  S  I  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  E  P  Y  D  L  A  I  
                    Query_12827  181  AGAACTCAATTTATCTGCAAATGAACAGCCTGCGAGCCGAGGACACGGCTGTATATTATTGTACGAGAGAACCCTACGATCTTGCAATCG  270
V  90.4% (226/250)  IGHV3-48*03  227  ........C.G.....................A...................T.....C...G.......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      DR3-IMGT-------------------------->                                  
                                      D  Y  D  G  D  S  E  T  T  F  D  Y  W  G  Q  G  T  L  V  T  V  A  S  
                    Query_12827  271  ACTACGATGGTGACTCCGAAACGACTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCGCCTCAG  339
D  100.0% (8/8)     IGHD2-21*02  13   -------........------------------------------------------------------  20
J  97.7% (42/43)    IGHJ4*02     6    --------------------------....................................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_200497

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           385     4e-109
IGHD1-1*01                                                                                            10.3    117   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TA	GAACG	GCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATAGAACGGCATTTGACTAC	TRDRTAFDY	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	30	0	0	100
FR3-IMGT	135	248	114	113	1	0	99.1
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	251	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  G  D  Y  G  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_12828  1    GGTCCCTGAGACTCTCCTGTTCAGCTTCTGGATTCACCTTTGGTGATTATGGTCTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (251/256)  IGHV3-49*04  47   ....................A..............................C.A...G................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_12828  91   AGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  98.0% (251/256)  IGHV3-49*04  137  ..........................................................................................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  T  R  D  R  T  A  F  
                    Query_12828  181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAAGCGAGGACACAGCCGTGTATTACTGTACTAGAGATAGAACGGCATTTG  270
V  98.0% (251/256)  IGHV3-49*04  227  ..........................................C.................................--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (5/5)     IGHD1-1*01   11   ------------------------------------------------------------------------------.....-------  15
J  100.0% (43/43)   IGHJ4*02     6    --------------------------------------------------------------------------------------....  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12828  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (43/43)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_307343

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           325     3e-91
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGCG	GGCTGG	G	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCTGGGAACTGGTTCGACCCC	ARGRRAGNWFDP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  V  P  G  K  G 
                    Query_12829  1    ACCCTGTCCCTCACCTGCAGTGTCTCAGGTGGCTCCATCAGTAGTGGGGCTTACTACTGGAGTTGGATCCGCCAGGTCCCAGGGAAGGGC  90
V  91.6% (229/250)  IGHV4-31*01  49   ...................C......T..............C.....T.G............C............CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  E  N  T  Q  Y  N  P  S  L  K  S  L  V  T  I  S  G  D  T  S 
                    Query_12829  91   CTGGAGTGGATTGGATACATCTATTACGGTGAGAATACCCAGTACAACCCGTCCCTCAAGAGTCTGGTTACCATATCAGGAGACACCTCT  180
V  91.6% (229/250)  IGHV4-31*01  139  ..............G............A...G..GC...T.C.......................A.............T......G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       T  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  W 
                    Query_12829  181  ACGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCTGGGAACTGG  270
V  91.6% (229/250)  IGHV4-31*01  229  .A.................A.................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------......-------  18
J  93.9% (46/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  D  P  W  G  H  G  I  L  V  T  V  T  S  
                    Query_12829  271  TTCGACCCCTGGGGCCACGGAATCCTGGTCACCGTCACCTCAG  313
J  93.9% (46/49)    IGHJ5*02     9    .................G....C.............T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_200494

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           297     7e-83
IGHD3-9*01                                                                                            12.2    31   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCCCGAGGGTGGCAG	TGACTTGTT	CCTTTCG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATCCCGAGGGTGGCAGTGACTTGTTCCTTTCGTAC	VKDPEGGSDLFLSY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	24	16	5	3	66.7
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	250	222	25	3	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  I  F  R  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12830  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTTATCTTCAGAAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  88.8% (222/250)  IGHV3-64*05  47   ..................................C.C......T..C...........................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  I  S  T  V  S  S  N  E  Y     T  Y  Y  A  D  S  V  K  G  R  F  S  V  S  R  D  N  S  
                    Query_12830  91   AATCTATTTCGACTGTCAGTAGTAATGAGTATA---CATACTACGCAGACTCAGTGAAGGGCAGATTCTCCGTTTCCAGAGACAACTCCA  177
V  88.8% (222/250)  IGHV3-64*05  137  ...A.G....AG..A.T..........G.GG..GCA................................A..A.C...........T....  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  M  L  Y  L  Q  M  S  S  L  R  P  E  D  S  G  V  Y  Y  C  V  K  D  P  E  G  G  S  D  
                    Query_12830  178  AGAACATGCTTTATCTTCAAATGAGCAGTCTGAGACCTGAGGACTCGGGTGTCTATTATTGTGTGAAAGATCCCGAGGGTGGCAGTGACT  267
V  88.8% (222/250)  IGHV3-64*05  227  ......C...G...G....................G........A...C...G.....C...........--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  88.9% (8/9)      IGHD3-9*01   15   -------------------------------------------------------------------------------------.....  19

                                      ------------->                                
                                      L  F  L  S  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12830  268  TGTTCCTTTCGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  313
D  88.9% (8/9)      IGHD3-9*01   20   G...------------------------------------------  23
J  100.0% (35/35)   IGHJ4*02     12   -----------...................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_210968

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         358     4e-101
IGHD3-9*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAGGGGA	ACGATATTTTGGCTGG	GGTCCTGGACCCACC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATAAGGGGAACGATATTTTGGCTGGGGTCCTGGACCCACCCTACGACTACTACGGTATGGACGTC	ARDKGNDILAGVLDPPYDYYGMDV	244	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	240	11	0	95.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  N  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_12831    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAACAGTGGTAGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  95.6% (240/251)  IGHV4-30-4*01  49   ..................A.....................G.......GA........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  R  G  R  A  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_12831    91   CTGGAGTGGATTGGGTACATCTATTACCGTGGGCGCGCCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCATTAGACACGTCC  180
V  95.6% (240/251)  IGHV4-30-4*01  139  ...........................A.....A..A.........................................G...........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------------
                                         K  N  Q  F  S  L  K  L  Y  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  K  G  N  D  I  L 
                    Query_12831    181  AAGAACCAGTTCTCCCTGAAGCTGTACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGATAAGGGGAACGATATTTTG  270
V  95.6% (240/251)  IGHV4-30-4*01  229  ........................AG.........T...................................-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  93.8% (15/16)    IGHD3-9*01     6    -------------------------------------------------------------------------------...........  16

                                        -----CDR3-IMGT------------------------------>                                 
                                         A  G  V  L  D  P  P  Y  D  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_12831    271  GCTGGGGTCCTGGACCCACCCTACGACTACTACGGTATGGACGTCTGGGGCCAGGGGACCACGGTCAGCGTCTCCTCA  348
D  93.8% (15/16)    IGHD3-9*01     17   A....-------------------------------------------------------------------------  21
J  94.8% (55/58)    IGHJ6*02       5    --------------------....T............................A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_146958

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            319     2e-89
IGHD2-15*01                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	GTGGTA	CGCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACGTGGTACGCGGGGTTTTGACTAC	ARHLGTRGTRGFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	24	5	0	82.8
CDR1-IMGT	30	53	27	22	2	3	81.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	248	228	17	3	91.9


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  A  V  S  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  
                    Query_12832  1    GGTCCCTGAGACTCTCCTGCGCTGTCTCTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGC  87
V  91.9% (228/248)  IGHV4-4*02   47   ..A.....TCC...A..................G.....T........GTA.......................C...............  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  T  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  I  I  S  L  D  T  S  
                    Query_12832  88   TGGAGTGGATTGGGGAAACCTATCACAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCACTAGACACGTCCA  177
V  91.9% (228/248)  IGHV4-4*02   137  ..................T......T...........................................C.......G......A.....  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  R  G  T  
                    Query_12832  178  AGAATCAGTTCTCCCTGAATCTCAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACGTGGTACGC  267
V  91.9% (228/248)  IGHV4-4*02   227  ....C..............G..G.G...........................................----------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-15*01  15   ---------------------------------------------------------------------------------......---  20

                                      ------------->                                  
                                      R  G  F  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_12832  268  GGGGTTTTGACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  315
J  97.7% (42/43)    IGHJ4*02     6    -----.........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_146959

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           343     2e-96
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	GGGA	GGTTCGGG	ACCTTACGCACGCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGAGGTTCGGGACCTTACGCACGCCACTACTCCGGTATGGACGTC	ARGGGSGPYARHYSGMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	232	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  V  F  Y  G  G  S  L  S  G  Y  Y  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_12833  1    ACCCTGTCCCTCACCTGCGTTTTTTATGGGGGGTCCCTCAGTGGTTATTACTGGAGCTGGATCCGCCAGACCCCAGGGAAGGGGCTGGAG  90
V  94.7% (232/245)  IGHV4-34*01  49   ...................C.G.C.....T......T..........C.....................C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  I  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S  K  R 
                    Query_12833  91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCATCTACAATGCGTCCCTTAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAGG  180
V  94.7% (232/245)  IGHV4-34*01  139  ..................................A......CC.......C.....................................AC  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  S  G  P  Y  A  R 
                    Query_12833  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGGGAGGTTCGGGACCTTACGCACGC  270
V  94.7% (232/245)  IGHV4-34*01  229  .................................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (8/8)     IGHD3-10*01  11   ---------------------------------------------------------------------........-------------  18

                                      -------------------->                                 
                                       H  Y  S  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12833  271  CACTACTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  98.1% (52/53)    IGHJ6*02     10   -......A..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_146957

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           374     7e-106
IGHD5-18*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGCCATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGCCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	244	5	0	98


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12834  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.0% (244/249)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_12834  91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.0% (244/249)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G 
                    Query_12834  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGATACAGCCATGGTTACGGAGGA  270
V  98.0% (244/249)  IGHV4-31*03  229  ...................................T.................................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  93.3% (14/15)    IGHD5-18*01  6    ---------------------------------------------------------------------......T........------  20

                                      -------->                                  
                                       V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12834  271  GTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (42/42)   IGHJ4*02     7    -..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_146950

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12835  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12835  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_12835  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12835  271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_146951

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           361     4e-102
IGHD1-1*01                                                                                            10.3    120   
IGHJ6*02                                                                                              108     8e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCCCCA	GAACG	N/A	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCCCAGAACGATTACTACTACTACTACGGCTTGGACGTC	ARGPQNDYYYYYGLDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	238	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  A  E  S  F  S  G  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12836  1    ACCCTGTCCCTCACCTGCGCTGTCTACGCTGAGTCCTTCAGTGGTTACTTCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  97.1% (238/245)  IGHV4-34*01  49   ..........................T.G..G.................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  G  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  M  S  K  N 
                    Query_12836  91   TGGATTGGGGAAATCAATCATAGTGGAGGCACCAGCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACATGTCCAAGAAC  180
V  97.1% (238/245)  IGHV4-34*01  139  ...........................A......A............................................C..........  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  Q  N  D  Y  Y  Y  Y 
                    Query_12836  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCCCCCAGAACGATTACTACTACTAC  270
V  97.1% (238/245)  IGHV4-34*01  229  .................................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (5/5)     IGHD1-1*01   11   -----------------------------------------------------------------------.....--------------  15
J  96.8% (60/62)    IGHJ6*02     1    ----------------------------------------------------------------------------..............  14

                                      -------------->                                 
                                       Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12836  271  TACGGCTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  96.8% (60/62)    IGHJ6*02     15   .....TA.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_146952

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           349     2e-98
IGHD1-20*01                                                                                           12.2    31   
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD1-20*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	C	GGTATCACT	TACCCCGTCCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGTATCACTTACCCCGTCCGTTTTGACTAC	RAVSLTPSVLTT	242	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	29	28	0	1	96.6
CDR1-IMGT	29	52	24	23	1	0	95.8
FR2-IMGT	53	103	51	50	1	0	98
CDR2-IMGT	104	127	24	21	3	0	87.5
FR3-IMGT	128	241	114	110	4	0	96.5
CDR3-IMGT (germline)	242	246	5	5	0	0	100
Total	N/A	N/A	247	237	9	1	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L   D  S  P  V  Q  P  L  D  S  P  S  V  S  T  T  *  A  G  S  A  R  L  Q  G  R  G  W 
                    Query_12837  1    GGTCCCT-AGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGTCTACTACCTGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  89
V  96.0% (237/247)  IGHV3-11*01  47   .......G.....................................A.......A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       S  G  F  H  T  L  I  V  V  V  V  P  F  T  T  Q  T  L  *  R  A  D  S  P  S  P  G  T  T  P 
                    Query_12837  90   AGTGGGTTTCATACATTAATAGTGGTGGTAGTACCATTTACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACACCA  179
V  96.0% (237/247)  IGHV3-11*01  137  ..................G....A.............A................................................G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                       R  T  H  C  I  C  K  W  T  T  *  E  P  R  T  R  P  S  I  T  V  R  A  V  S  L  T  P  S  V 
                    Query_12837  180  AGAACTCACTGTATCTGCAAATGGACAACCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAGCGGTATCACTTACCCCGTCCGTT  269
V  96.0% (237/247)  IGHV3-11*01  227  .......................A...G........................G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  88.9% (8/9)      IGHD1-20*01  1    --------------------------------------------------------------------.....A...-------------  9
J  97.0% (32/33)    IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                        
                                       L  T  T  G  A  R  E  P  W  S  P
                    Query_12837  270  TTGACTACTGGGGCCAGGGAGCCCTGGTCACC  301
J  97.0% (32/33)    IGHJ4*02     7    ....................A...........  38


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_146953

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           283     1e-78
IGHD3-22*01                                                                                           16.1    2.6  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGGGGCGGCCCGGAACCGAC	AGTAGTGG	CCTCCC	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGGGGCGGCCCGGAACCGACAGTAGTGGCCTCCCCAATTGGTTCGACCCC	AGGRPGTDSSGLPNWFDP	287	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	58	12	0	82.9
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	172	27	19	5	3	70.4
FR3-IMGT	173	286	114	94	20	0	82.5
CDR3-IMGT (germline)	287	289	3	3	0	0	100
Total	N/A	N/A	289	237	49	3	82


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  A  V  R  R  S  G  D  S  L  K  I  S  C  K  T  S  G  Y  K  F  S  T  Y
                    Query_12838  1    GCAGCTGGTGCAGTCTGGAGCAGCGGTGAGGAGGTCCGGAGACTCTCTGAAGATCTCTTGTAAGACCTCGGGATACAAGTTCTCCACATA  90
V  82.0% (237/289)  IGHV5-51*01  6    .......................A.....AA.A.C....G..G..............C......GGT..T.......GC..TA...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><--------CDR2-IMGT--------><-------
                                        G  I  A  W  V  R  Q  M  P  G  R  G  L  E  W  A  G  I  I  Y  P  S  D  S  K  N  V  R  Y  N
                    Query_12838  91   CGGGATCGCCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGGCGGGAATCATCTATCCTAGTGACTCAAAGAATGTCAGATATAA  180
V  82.0% (237/289)  IGHV5-51*01  96   .T......G.......................A.............AT...G............G.......---TG..AC......C.G  182
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S     D  T  R  Y  S

                                      ---------------------------------------------FR3-IMGT-------------------------------------
                                        P  S  F  R  G  H  V  T  I  S  V  E  K  A  I  T  T  A  Y  L  E  W  D  S  L  E  P  S  D  S
                    Query_12838  181  TCCGTCCTTCAGAGGCCACGTCACCATTTCCGTCGAGAAGGCCATCACCACCGCCTACCTGGAGTGGGACAGCCTGGAGCCCTCGGACAG  270
V  82.0% (237/289)  IGHV5-51*01  183  C.........CA......G........C..A.C...C...T......G.............C.....AG.......A..G.........C  272
                                        P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T

                                      ---------------><----------------------CDR3-IMGT--------------------->                    
                                        G  I  Y  Y  C  A  G  G  R  P  G  T  D  S  S  G  L  P  N  W  F  D  P  W  G  Q  G  T  L  V
                    Query_12838  271  CGGCATCTATTACTGTGCGGGGGGGCGGCCCGGAACCGACAGTAGTGGCCTCCCCAATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  360
V  82.0% (237/289)  IGHV5-51*01  273  ..C...G............-----------------------------------------------------------------------  291
                                        A  M  Y  Y  C  A                                                                        
D  100.0% (8/8)     IGHD3-22*01  14   ----------------------------------------........------------------------------------------  21
J  94.0% (47/50)    IGHJ5*02     2    ------------------------------------------------------...C................................  37

                                                    
                                        T  V  A  P  
                    Query_12838  361  CACCGTCGCCCCAG  374
J  94.0% (47/50)    IGHJ5*02     38   .......T..T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_122862

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            396     2e-112
IGHD6-6*01                                                                                            16.1    2.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	72	3	0	96
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	100	14	0	87.7
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	274	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S 
                    Query_12839  2    CAGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGC  91
V  92.9% (274/295)  IGHV1-8*02   1    .....G........G........G..........................................................C.....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 
                    Query_12839  92   AGCTATGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACAGGCTAT  181
V  92.9% (274/295)  IGHV1-8*02   91   .............A.........................................................C..................  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  K  G  R  V  I  M  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D 
                    Query_12839  182  GCACAGAAGTTCAAGGGCAGAGTCATCATGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGAC  271
V  92.9% (274/295)  IGHV1-8*02   181  ............C............C.......A..A...C.T....A..................C..........G.GAT....G...  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                  
                                       T  A  V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12839  272  ACGGCCGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  92.9% (274/295)  IGHV1-8*02   271  ........G................---------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01   9    ------------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02     9    ------------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_122863

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           353     9e-100
IGHD6-13*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTT	TATAACAGCAGTTGG	GTGCTCGA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTTATAACAGCAGTTGGGTGCTCGATGACTTC	ARDFYNSSWVLDDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  I  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12840  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAATCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-21*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  T  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12840  91   AGTGGGTCTCATCCATTAGTAGTAGTACTAGTTACATATATTATGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-21*01  137  ...........................G............C..C..............................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  R  S  L  Y  L  H  V  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  Y  N  S  S  W  
                    Query_12840  181  AGAGATCACTGTATCTGCACGTGAACAACCTGAGGGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGATTTTTATAACAGCAGTTGGG  270
V  95.2% (238/250)  IGHV3-21*01  227  ...AC..............AA......G......A.................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD6-13*01  4    --------------------------------------------------------------------------....G......C...-  18

                                      ------------->                                
                                      V  L  D  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12840  271  TGCTCGATGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  316
J  97.4% (38/39)    IGHJ4*02     8    -------.....A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_122860

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  T  T  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_12841  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATTACTACTTACTACTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*08  49   ..................A............G......C.G..G................A....G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_12841  91   TGGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*08  139  .......G.........T.....T.....CA.....T...................T........CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_12841  181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATG  270
V  92.2% (225/244)  IGHV4-59*08  229  ...............C...............................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  92.0% (46/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_12841  271  GCCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  309
J  92.0% (46/50)    IGHJ6*02     24   .A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_122861

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           313     1e-87
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCGCCGGGACG	GTGGTAATTAC	CCTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCGCCGGGACGGTGGTAATTACCCTATTGACTAC	ARPRRDGGNYPIDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	224	24	0	90.3


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  R  T  D  G  Y  Y  W  S  W  I  R  Q  F  P  G  K  G  
                    Query_12842  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGAACTGATGGTTACTACTGGAGCTGGATCCGCCAGTTCCCAGGGAAGGGCC  93
V  90.3% (224/248)  IGHV4-31*02  50   .....TCC...A............................C.G..G............................CA..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  F  I  Y  H  T  G  S  T  Y  Y  T  P  S  V  R  G  R  V  T  M  S  V  D  T  S  
                    Query_12842  94   TGGAGTGGATTGGGTTCATCTACCACACTGGGAGCACCTACTACACCCCGTCCGTCCGGGGTCGAGTCACCATGTCAGTGGACACGTCTA  183
V  90.3% (224/248)  IGHV4-31*02  140  ...............A......TT...G.................A.......C..AA.A.......T.....A.....A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  R  R  D  G  G  N  
                    Query_12842  184  AGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGACCTCGCCGGGACGGTGGTAATT  273
V  90.3% (224/248)  IGHV4-31*02  230  ..................A.....G...........................G...............----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD3-22*01  18   ---------------------------------------------------------------------------------.....T...  26

                                      ------------->                                  
                                      Y  P  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12842  274  ACCCTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  90.9% (10/11)    IGHD3-22*01  27   ..----------------------------------------------  28
J  100.0% (42/42)   IGHJ4*02     7    ------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_122866

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_12843  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_12843  91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y 
                    Query_12843  181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTAC  270
V  91.4% (223/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD2-2*01   8    ---------------------------------------------------------------------........T........----  24
J  88.5% (46/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_12843  271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  318
J  88.5% (46/52)    IGHJ6*02     15   ...GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_112459

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           291     6e-81
IGHD2-15*01                                                                                           14.1    8.6  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGGGGATTTCGAGAA	GGTGGTA	AATCGGTCAGT	TTTGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGGGGATTTCGAGAAGGTGGTAAATCGGTCAGTTTTGCCTAC	ARDGGFREGGKSVSFAY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  S  T  Y  T  M  N  W  L  R  Q  A  P  G  K  E  P  
                    Query_12844  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGGTTCAGTACTTATACTATGAACTGGCTTCGCCAGGCTCCAGGGAAGGAGCCGC  90
V  87.2% (218/250)  IGHV3-21*01  47   ....................................CC.......GC....GC.........G.C...................G..T.G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  V  A  S  V  S  G  D  G  T  Y  I  Y  Y  A  E  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12844  91   AATGGGTCGCATCTGTGAGTGGAGATGGAACCTACATATACTACGCAGAATCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  87.2% (218/250)  IGHV3-21*01  137  .G......T....CA.T...A.TAG.A.T.GT.................C...G...................................A  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      E  N  S  V  F  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  G  G  F  R  E  G  
                    Query_12844  181  AGAACTCAGTGTTTCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCTGTCTATTATTGTGCGAGAGACGGGGGATTTCGAGAAGGTG  270
V  87.2% (218/250)  IGHV3-21*01  227  ........C...A.......................C...............G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-15*01  14   --------------------------------------------------------------------------------------....  17

                                      GT-------------------->                                  
                                      G  K  S  V  S  F  A  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_12844  271  GTAAATCGGTCAGTTTTGCCTACTGGGGCCAGGGAACCCTTGTCATCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD2-15*01  18   ...------------------------------------------------------  20
J  93.0% (40/43)    IGHJ4*02     6    --------------....A.....................G....C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_122864

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD2-21*01                                                                                           18.0    0.69  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	G	ATTGCGGTGGTG	TAGTGATGGAACTTGTTACTCTGGTTCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTAT	ARRLRWCSDGTCYSGSFEY	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	294	276	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  K  F  T  
                    Query_12845  2    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAAGTTTACCA  91
V  93.9% (276/294)  IGHV5-51*01  2    ....G.............................A........G.....................................GC.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  H  W  I  G  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  F  P  R  D  S  D  T  R  Y  
                    Query_12845  92   GCCATTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTCGTGACTCCGATACCAGATATA  181
V  93.9% (276/294)  IGHV5-51*01  92   ..T.C......................T...........................G.......A....G.......T...........C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      N  P  S  F  Q  D  Q  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  D  S  L  K  A  S  D  
                    Query_12845  182  ACCCGTCCTTCCAAGACCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTACCTGCAGTGGGACAGCCTGAAGGCCTCGGACA  271
V  93.9% (276/294)  IGHV5-51*01  182  G..............G.......................A............................AG....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  M  Y  Y  C  A  R  R  L  R  W  C  S  D  G  T  C  Y  S  G  S  F  E  Y  W  G  Q  G  T  
                    Query_12845  272  CCGCCATGTATTACTGTGCGAGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTATTGGGGCCAGGGAACCC  361
V  93.9% (276/294)  IGHV5-51*01  272  ........................------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  91.7% (11/12)    IGHD2-21*01  6    -------------------------....T.......-----------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------------------------.....C..C................  30

                                                        
                                      L  V  T  V  S  S  
                    Query_12845  362  TGGTCACCGTCTCCTCAG  379
J  95.3% (41/43)    IGHJ4*02     31   ..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_311364

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            410     1e-116
IGHD3-22*01                                                                                           46.8    1e-09 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACACA	N/A	ATTACTATGATAGTAGTGGTTATT	CTTTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACAATTACTATGATAGTAGTGGTTATTCTTTTTTTGACTAC	AHNYYDSSGYSFFDY	267	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	50	45	42	3	0	93.3
CDR1-IMGT	51	80	30	30	0	0	100
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	152	21	21	0	0	100
FR3-IMGT	153	266	114	114	0	0	100
CDR3-IMGT (germline)	267	273	7	7	0	0	100
Total	N/A	N/A	268	265	3	0	98.9


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  S  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R 
                    Query_12846  6    CTGGTGAAGCCCTCGCAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAGTGGGTGTGGGCTGGATCCGT  95
V  98.9% (265/268)  IGHV2-5*01   31   ........A...A.A...........................................................................  120
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R 

                                      ------FR2-IMGT---------------------><-----CDR2-IMGT-----><--------------------------------
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T 
                    Query_12846  96   CAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTTATTGGAATGATGATAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCACC  185
V  98.9% (265/268)  IGHV2-5*01   121  ..........................................................................................  210
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T 

                                      --------------------FR3-IMGT----------------------------------------------------><--------
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  N 
                    Query_12846  186  ATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACATATTACTGTGCACACAAT  275
V  98.9% (265/268)  IGHV2-5*01   211  ........................................................................................--  298
                                       I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H    
D  100.0% (24/24)   IGHD3-22*01  3    ----------------------------------------------------------------------------------------..  4

                                      ---------CDR3-IMGT----------------->                                  
                                       Y  Y  D  S  S  G  Y  S  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12846  276  TACTATGATAGTAGTGGTTATTCTTTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  345
D  100.0% (24/24)   IGHD3-22*01  5    ......................------------------------------------------------  26
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_112455

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           322     2e-90
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_12847  1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_12847  91   CTAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-61*08  139  ..G..................T..T................C.................G.......TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N 
                    Query_12847  181  AGGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAAC  270
V  91.2% (228/250)  IGHV4-61*08  229  .A.................A.....GC..........................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G..G.....G.  22

                                      3-IMGT----------------------->                                  
                                       C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12847  271  TGCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  86.4% (19/22)    IGHD2-15*01  23   ......----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_122868

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            385     5e-109
IGHD2-2*02                                                                                            16.1    2.6   
IGHJ6*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGACGACTGTACTACTTCCCC	CTGCTATA	GCGACTATC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGACGACTGTACTACTTCCCCCTGCTATAGCGACTATCACTACTTCGGTTTGGACGTC	ARVDDCTTSPCYSDYHYFGLDV	280	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	11	66	56	55	1	0	98.2
CDR1-IMGT	67	90	24	23	1	0	95.8
FR2-IMGT	91	141	51	47	4	0	92.2
CDR2-IMGT	142	165	24	21	3	0	87.5
FR3-IMGT	166	279	114	108	6	0	94.7
CDR3-IMGT (germline)	280	286	7	7	0	0	100
Total	N/A	N/A	276	261	15	0	94.6


Alignments

                                      <-----------------------FR1-IMGT-----------------------><-------CDR1-IMGT------><---------
                                         G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  T  F  T  N  Y  A  I  H  W  
                    Query_12848  11   CTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGACTTCTGGATACACCTTCACTAACTATGCTATACATTGGG  100
V  94.6% (261/276)  IGHV1-3*01   20   ..................................................G.....................G.........G.......  109
                                         G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y  A  M  H  W  

                                      -----------FR2-IMGT---------------------><-------CDR2-IMGT------><------------------------
                                      V  R  Q  A  P  G  Q  S  L  E  W  M  G  W  I  N  A  A  N  G  H  T  K  Y  S  Q  N  F  Q  G  
                    Query_12848  101  TGCGCCAGGCCCCAGGACAAAGTCTTGAGTGGATGGGGTGGATCAACGCTGCCAATGGCCACACAAAATATTCACAGAACTTCCAGGGCA  190
V  94.6% (261/276)  IGHV1-3*01   110  .............C........G..............A.............G......TA...................G..........  199
                                      V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q  K  F  Q  G  

                                      ----------------------------FR3-IMGT----------------------------------------------------><
                                      R  V  T  I  S  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  T  S  E  D  A  A  V  Y  Y  C  
                    Query_12848  191  GAGTCACCATTTCCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGACATCTGAGGACGCGGCTGTCTATTACTGTG  280
V  94.6% (261/276)  IGHV1-3*01   200  ...........A................................................G......A...A.......G..........  289
                                      R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A  V  Y  Y  C  

                                      ----------------------------CDR3-IMGT--------------------------->                         
                                      A  R  V  D  D  C  T  T  S  P  C  Y  S  D  Y  H  Y  F  G  L  D  V  W  G  Q  G  T  T  V  T  
                    Query_12848  281  CGAGAGTCGACGACTGTACTACTTCCCCCTGCTATAGCGACTATCACTACTTCGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCG  370
V  94.6% (261/276)  IGHV1-3*01   290  ......------------------------------------------------------------------------------------  295
                                      A  R                                                                                      
D  100.0% (8/8)     IGHD2-2*02   22   ----------------------------........------------------------------------------------------  29
J  96.2% (51/53)    IGHJ6*02     10   ---------------------------------------------......A....A.................................  54

                                              
                                      V  S  S 
                    Query_12848  371  TCTCCTCA  378
J  96.2% (51/53)    IGHJ6*02     55   ........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_122869

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           378     3e-107
IGHD5-18*01                                                                                           18.0    0.65  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	A	GGATCCACCTATGGT	CA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGGATCCACCTATGGTCATGACTAC	AREGSTYGHDY	291	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	68	7	0	90.7
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	46	5	0	90.2
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	105	9	0	92.1
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	269	27	0	90.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  F  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  G  P  F  S 
                    Query_12849  3    CAGGTTCAGCTGGTGCAGTCTGGAGCCGAGTTTAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGCAAGGCCTCTGGCGGCCCCTTCAGC  92
V  90.9% (269/296)  IGHV1-69*01  1    .....G.................G..T...G.G......................A...............T.....A...A........  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  A  I  S  W  I  R  Q  A  P  G  L  G  L  E  W  M  G  G  I  I  P  I  L  G  P  A  N  Y 
                    Query_12849  93   AGTTACGCTATTAGCTGGATTCGACAGGCCCCTGGACTAGGGCTTGAGTGGATGGGGGGGATCATCCCTATCCTTGGTCCAGCAAACTAC  182
V  90.9% (269/296)  IGHV1-69*01  91   ..C..T.....C......G.G................A..................A...............T.....A...........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  V  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  L  E  V  K  S  L  R  S  E  D 
                    Query_12849  183  GCAGTGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACTTGGAGGTGAAAAGCCTGCGATCTGAGGAC  272
V  90.9% (269/296)  IGHV1-69*01  181  ...CA.......................................................A.....C...GC......A...........  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------CDR3-IMGT----------->                           
                                       A  A  V  Y  Y  C  A  R  E  G  S  T  Y  G  H  D  Y  W  G  Q  G  T  L  V  T  V 
                    Query_12849  273  GCGGCCGTGTATTATTGTGCGAGAGAAGGATCCACCTATGGTCATGACTACTGGGGCCAGGGAACCCTGGTCACCGTC  350
V  90.9% (269/296)  IGHV1-69*01  271  A.............C...........----------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                       
D  86.7% (13/15)    IGHD5-18*01  3    ---------------------------....A..G.......------------------------------------  17
J  100.0% (34/34)   IGHJ4*02     8    --------------------------------------------..................................  41


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_200634

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           372     2e-105
IGHD6-19*01                                                                                           21.8    0.043 
IGHJ5*01                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTCCCGC	GTATAGTAGTGGCT	ACGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTCCCGCGTATAGTAGTGGCTACGGCTGGTTCGGCTCC	ARDSPAYSSGYGWFGS	261	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	108	6	0	94.7
CDR3-IMGT (germline)	261	268	8	8	0	0	100
Total	N/A	N/A	268	253	15	0	94.4


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  M  N  T  Y  Y  W  S  W  I  R  
                    Query_12850  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAATACTTACTACTGGAGTTGGATCCGGC  90
V  94.4% (253/268)  IGHV4-59*01  26   ................T............................................C.G..G............C..........  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  T  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  T  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_12850  91   AGACCCCAGGGAAGGGACTGGAGTGGATTGGTTATATCTATTACACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  94.4% (253/268)  IGHV4-59*01  116  ..C............................G.............G.....G......................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  L  D  T  S  K  N  Q  F  S  L  T  L  R  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  D  
                    Query_12850  181  TATCACTAGACACGTCCAAGAACCAGTTCTCCCTGACGCTGAGGTCTGTGAGCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGATT  270
V  94.4% (253/268)  IGHV4-59*01  206  .....G..............................A......C.......C..................G.....C...........--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      ----------CDR3-IMGT------------------>                                  
                                      S  P  A  Y  S  S  G  Y  G  W  F  G  S  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_12850  271  CTCCCGCGTATAGTAGTGGCTACGGCTGGTTCGGCTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  342
D  92.9% (13/14)    IGHD6-19*01  3    -------......C.......---------------------------------------------------  16
J  93.6% (44/47)    IGHJ5*01     5    -------------------------........A............A.....................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_112452

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           308     4e-86
IGHD4-17*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGTAGGG	ACGGTGACTAC	GGGGCGGGCCTTGAGCAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCGTAGGGACGGTGACTACGGGGCGGGCCTTGAGCAT	ARERRDGDYGAGLEH	230	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	19	5	0	79.2
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	24	0	0	100
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	211	14	0	93.8


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  L  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  W  Y  D
                    Query_12851  13   GTCTGGATTCACCTTAAGTTCCTACGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGTCAGTTATATGGTATGA  102
V  93.8% (211/225)  IGHV3-33*01  72   ...............C...AG...T.G..............................................G................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  E  S  K  N  T  M  H  L  Q  M  S
                    Query_12851  103  TGGAAGTAATAAATACTATGCAGACGCCGTGAAGGGCCGATTCACCATCTCCAGAGACGAATCCAAGAACACGATGCATCTGCAAATGAG  192
V  93.8% (211/225)  IGHV3-33*01  162  .........................T................................A.T............C..T............A  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------CDR3-IMGT----------------->        
                                        S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  R  R  D  G  D  Y  G  A  G  L  E  H  W  G  Q
                    Query_12851  193  CAGCCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGCGAGAGAGCGTAGGGACGGTGACTACGGGGCGGGCCTTGAGCATTGGGGCCA  282
V  93.8% (211/225)  IGHV3-33*01  252  .........................G.G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (11/11)   IGHD4-17*01  6    -----------------------------------------------------...........--------------------------  16
J  100.0% (34/34)   IGHJ4*02     15   ----------------------------------------------------------------------------------........  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_12851  283  GGGAACCCTGGTCACCGTCTCCTCAG  308
J  100.0% (34/34)   IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_112453

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           408     4e-116
IGHD2-2*02                                                                                            10.3    139   
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGT	CTATA	TCGACTTTCATT	TACCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCTATATCGACTTTCATTTACCACTACGGTATGGACGTC	ARGSISTFIYHYGMDV	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	278	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  T  A  S  G  Y  T  F  K 
                    Query_12852  1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCACGGCTTCTGGTTACACCTTTAAG  90
V  94.2% (278/295)  IGHV1-18*01  1    .....T.............................................................A....................CC  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  M  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  T  A  Y  N  G  K  R  D  Y 
                    Query_12852  91   AACTATGGTATCATGTGGGTGCGACAGGCCCCTGGACAAGGGCTGGAGTGGATGGGCTGGATCACCGCTTACAATGGTAAAAGAGACTAT  180
V  94.2% (278/295)  IGHV1-18*01  91   .G...........GC.............................T...........A.......G...............C.C.A.....  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_12852  181  TCACAGAAACTCCAGGGCAGAGTCACCATGACCACGGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  270
V  94.2% (278/295)  IGHV1-18*01  181  G.......G..........................A......................................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  G  S  I  S  T  F  I  Y  H  Y  G  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_12852  271  ACGGCCGTCTATTACTGTGCGAGAGGGTCTATATCGACTTTCATTTACCACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACC  360
V  94.2% (278/295)  IGHV1-18*01  271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD2-2*02   25   ----------------------------.....---------------------------------------------------------  29
J  98.1% (53/54)    IGHJ6*02     9    ---------------------------------------------...T.........................................  53

                                               
                                       V  S  S 
                    Query_12852  361  GTCTCCTCA  369
J  98.1% (53/54)    IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_261888

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           327     9e-92
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAG	GTCGAGGGAG	TGACTACGGT	AGACT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGGTCGAGGGAGTGACTACGGTAGACTCTACTTTGACTAC	AKGRGSDYGRLYFDY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	101	51	44	4	3	86.3
CDR2-IMGT	102	125	24	19	5	0	79.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	249	231	15	3	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  I  S  W  V  R  R  A  P  G  K  G  L  
                    Query_12853  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATGCCATCAGCTGGGTCCGCCGGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-23*01  47   ...........................................C.G.........G.............A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S     M  I  G  G  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12853  91   AATGGATCTCA---ATGATTGGTGGTGGTGGAACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  177
V  92.8% (231/249)  IGHV3-23*01  137  .G...G.....GCT..T.G....A.......T.G........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  G  R  G  S  D  Y  G  
                    Query_12853  178  AGAACACCCTGTATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCCAAAGGTCGAGGGAGTGACTACGGTA  267
V  92.8% (231/249)  IGHV3-23*01  227  .......G...............A..........................G.............G....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD4-17*01  1    -------------------------------------------------------------------------------..........-  10

                                      ---------------->                                  
                                      R  L  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12853  268  GACTCTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (47/47)   IGHJ4*02     2    ----...............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_261889

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD3-3*01                                                                                            23.8    0.011
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCAATCGAGGC	TTTTGGAGTGGT	CGGGGGCCCCTTATCGC	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCAATCGAGGCTTTTGGAGTGGTCGGGGGCCCCTTATCGCTACTTCGATCTC	AREQSRLLEWSGAPYRYFDL	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	14	7	0	66.7
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  A  P  G  K  G  L  E  
                    Query_12854  4    CCCTGAGACTCTCCTGCACTGTCTCGGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATTCGGCAGGCCCCAGGGAAGGGACTGGAGT  93
V  90.6% (221/244)  IGHV4-59*01  50   .....TCC...A.............T...................................C......C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  F  Y  S  R  G  R  T  N  Y  N  P  A  L  T  T  R  V  T  I  S  A  D  S  S  K  N  
                    Query_12854  94   GGATTGGATATTTCTATAGCAGAGGCAGGACGAACTACAACCCCGCCCTCACGACTCGAGTCACCATATCAGCAGACTCGTCCAAGAACC  183
V  90.6% (221/244)  IGHV4-59*01  140  .......G...A.....TA...T..G..C..C............T......A..G.................T....A............  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  Q  S  R  L  L  E  W  S  
                    Query_12854  184  AGTTCTCCCTGAAGCTCAGCTCTGTTACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGAGCAATCGAGGCTTTTGGAGTGGTCGG  273
V  90.6% (221/244)  IGHV4-59*01  230  ................G........G....................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (12/12)   IGHD3-3*01   11   ---------------------------------------------------------------------------............---  22

                                      T------------------------>                                  
                                      G  A  P  Y  R  Y  F  D  L  W  G  R  G  T  Q  V  T  V  S  S  
                    Query_12854  274  GGGCCCCTTATCGCTACTTCGATCTCTGGGGCCGTGGCACCCAGGTCACTGTCTCCTCAG  333
J  97.8% (45/46)    IGHJ2*01     8    --------------............................T.................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_154780

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            325     3e-91
IGHD1-1*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTA	GGAACG	CGTGGTACTCGGGGT	TTTGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACGCGTGGTACTCGGGGTTTTGTCTAC	ARHLGTRGTRGFVY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	22	2	3	81.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	246	229	14	3	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_12855  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  87
V  93.1% (229/246)  IGHV4-4*02   49   ...............................G.....T........GTA.......................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  T  Y  H  S  G  S  T  N  Y  N  P  S  P  K  S  R  V  L  I  S  L  D  T  S  K 
                    Query_12855  88   GAGTGGATTGGGGAAACCTATCACAGTGGGAGCACCAACTACAACCCGTCCCCCAAGAGTCGAGTCCTCATATCACTAGACACGTCCAAG  177
V  93.1% (229/246)  IGHV4-4*02   139  ................T......T............................T.............AC.......G......A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  R  G  T  R 
                    Query_12855  178  AATCAGTTCTCCCTGAATCTCAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACGCGTGGTACTCGG  267
V  93.1% (229/246)  IGHV4-4*02   229  ..C..............G..G.G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD1-1*01   10   ------------------------------------------------------------------------......------------  15

                                      ----------->                                  
                                       G  F  V  Y  W  G  Q  G  T  Q  V  P  V  S  S  
                    Query_12855  268  GGTTTTGTCTACTGGGGCCAGGGAACCCAGGTCCCCGTCTCCTCAG  313
J  93.0% (40/43)    IGHJ4*02     6    ---....A....................T....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_154781

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD2-8*02                                                                                            14.1    9.5   
IGHJ6*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGT	TACTGGT	ACCAACGCCAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTC	ARLVTGTNATYGLDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_12856  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAGCTA  90
V  98.3% (284/289)  IGHV5-51*03  6    .................................................................G........................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  R  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_12856  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGAGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ........G..................................T..............................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12856  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ...................................A.........C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  L  V  T  G  T  N  A  T  Y  G  L  D  V  W  G  Q  G  S  E  V  T  V  S  S
                    Query_12856  271  CATGTATTACTGTGCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTCTGGGGCCAAGGGAGCGAGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-8*02   10   ------------------------.......-----------------------------------------------------------  16
J  91.8% (45/49)    IGHJ6*02     14   ------------------------------------------.......A.....................C.AC...............  61

                                       
                                       
                    Query_12856  361  A  361
J  91.8% (45/49)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_154786

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           353     9e-100
IGHD6-19*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCC	GGGTATAGTAGTGGCTG	ACC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCCGGGTATAGTAGTGGCTGACCACTTTGACTTC	AKDPGIVVADHFDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12857  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-30*18  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  E  N  K  R  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  F  
                    Query_12857  91   AGTGGGTGGCAGTTATATCATATGATGAAAATAAAAGATATTATGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTTCA  180
V  95.2% (238/250)  IGHV3-30*18  137  ...........................G..G...T.A...C................A.............................C..  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  F  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  K  D  P  G  I  V  V  A  
                    Query_12857  181  AGAACACACTGTTTCTGCAAATGAACAGCCTGAAAACTGAGGACACGGCTGTGTATTACTGTGCGAAAGATCCGGGTATAGTAGTGGCTG  270
V  95.2% (238/250)  IGHV3-30*18  227  .......G....A....................G.G..................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  94.1% (16/17)    IGHD6-19*01  1    -------------------------------------------------------------------------........C........  17

                                      ------------->                                  
                                      D  H  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12857  271  ACCACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.8% (44/45)    IGHJ4*02     4    ---.........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_264522

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-5*01                                                                                            399     2e-113
IGHD1-26*01                                                                                           12.2    34    
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-5*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCGA	GAACACTAT	AGCTAC	ATCTTGCCCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACACCGAGAACACTATAGCTACATCTTGCCCTACTACTTTGACTAC	AHREHYSYILPYYFDY	263	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	29	1	0	96.7
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	19	2	0	90.5
FR3-IMGT	149	262	114	110	4	0	96.5
CDR3-IMGT (germline)	263	271	9	8	1	0	88.9
Total	N/A	N/A	271	263	8	0	97


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  E  V  G  V  G  W  I  R
                    Query_12858  1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGAAGTGGGTGTGGGCTGGATCCG  90
V  97.0% (263/271)  IGHV2-5*01   30   ....................................................................G.....................  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  V  G  V  G  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  H  W  N  D  E  K  R  Y  S  P  S  L  K  S  R  L  T
                    Query_12858  91   TCAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTCATTGGAATGATGAGAAGCGCTACAGCCCATCTCTGAAGAGCAGGCTCAC  180
V  97.0% (263/271)  IGHV2-5*01   120  ........................................T.............T...................................  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  Y  W  N  D  D  K  R  Y  S  P  S  L  K  S  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  L  D  T  G  I  Y  Y  C  A  H  R
                    Query_12858  181  CATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTCACAATGACCAACATGGACCCTTTGGACACAGGCATATATTACTGTGCACACCG  270
V  97.0% (263/271)  IGHV2-5*01   210  ....................................T.....................G.........C..C................A.  299
                                        I  T  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  H  R

                                      ------------CDR3-IMGT------------------>                                  
                                        E  H  Y  S  Y  I  L  P  Y  Y  F  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_12858  271  AGAACACTATAGCTACATCTTGCCCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  344
V  97.0% (263/271)  IGHV2-5*01   300  .-------------------------------------------------------------------------  300
                                                                                                                
D  100.0% (6/6)     IGHD1-26*01  12   ----------......----------------------------------------------------------  17
J  97.9% (47/48)    IGHJ4*02     1    --------------------------...................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_154784

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           341     5e-96
IGHD4-17*01                                                                                           12.2    31   
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGAAGAAAG	TACGGT	CA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATGGGAAGAAAGTACGGTCAGATGCTTTTGATATA	VRDGKKVRSDAFDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  S  G  S  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12859  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGTGGTTCCTGGATGCACTGGGTCCGCCAAGCTCCTGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-74*01  47   ...................................A........A.C.A...........................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  G  D  G  S  G  T  N  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12859  91   TGTGGGTCTCACGTATTAATGGTGATGGGAGTGGCACAAACTACGCGGAATCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCC  180
V  93.6% (234/250)  IGHV3-74*01  137  ....................A...........A......G.........C.......................................A  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      Q  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  R  D  G  K  K  V  R  S  
                    Query_12859  181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGATGACACGGCTGTATACTACTGTGTCAGAGATGGGAAGAAAGTACGGTCAG  270
V  93.6% (234/250)  IGHV3-74*01  227  .......G................................G...........G..T.......CA.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD4-17*01  5    ---------------------------------------------------------------------------------......---  10
J  97.9% (46/47)    IGHJ3*02     2    -----------------------------------------------------------------------------------------.  2

                                      ------------->                                
                                      D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S
                    Query_12859  271  ATGCTTTTGATATATGGGGCCAAGGGACAATGGTCACCGTCTCTTC  316
J  97.9% (46/47)    IGHJ3*02     3    .............C................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_154785

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           285     4e-79
IGHD4-4*01                                                                                            14.1    8.5  
IGHJ2*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-4*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACAGTTTTTCTCCCCCGTCG	GACTACA	T	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATAACAGTTTTTCTCCCCCGTCGGACTACATCTTCGATCTC	VRDNSFSPPSDYIFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	216	34	0	86.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  K  N  Y  N  M  N  W  V  R  Q  A  P  G  K  R  L  
                    Query_12860  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAAGAACTACAACATGAACTGGGTCCGCCAGGCTCCAGGGAAGCGCCTGG  90
V  86.4% (216/250)  IGHV3-21*01  47   ....................G.....................GT.G...T.G...............................G.G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  G  R  N  N  D  I  H  Y  A  D  S  M  K  G  R  I  T  I  S  R  D  N  A  
                    Query_12860  91   AGTGGGTCTCATCGATTAGAGGTAGAAACAATGACATCCACTACGCAGACTCAATGAAGGGCCGAATCACCATCTCCAGAGACAACGCCA  180
V  86.4% (216/250)  IGHV3-21*01  137  .............C.....TA....T.GT.G.T....AT..............G...........T........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  N  S  L  Y  L  H  M  H  S  L  G  A  E  D  T  A  I  Y  F  C  V  R  D  N  S  F  S  P  P  
                    Query_12860  181  ACAATTCACTCTATCTCCACATGCACAGCCTGGGAGCCGAGGACACGGCGATCTATTTCTGCGTCAGAGATAACAGTTTTTCTCCCCCGT  270
V  86.4% (216/250)  IGHV3-21*01  227  .G..C.....G.....G..A...A........A................TG.G....A...T.CG.....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      T------------------>                                  
                                      S  D  Y  I  F  D  L  W  G  R  G  T  P  V  S  V  S  S  
                    Query_12860  271  CGGACTACATCTTCGATCTCTGGGGCCGTGGCACCCCAGTCTCTGTCTCCTCAG  324
D  100.0% (7/7)     IGHD4-4*01   2    --.......---------------------------------------------  8
J  93.2% (41/44)    IGHJ2*01     10   ----------..........................TG...A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_198153

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           310     1e-86
IGHD3-3*01                                                                                            10.3    119  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGACACAG	TTTTT	AGTTTCCAC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACACAGTTTTTAGTTTCCACTTCGACCCC	ARVDTVFSFHFDP	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  F  F  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_12861  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGCGGTAGTTTCTTTTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  89.6% (224/250)  IGHV4-61*01  49   .........................................C..T.......A..AC....G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  A  Y  I  S  Y  S  G  R  T  K  S  N  P  S  L  K  S  R  V  T  M  S  I  D  T  S 
                    Query_12861  91   CTGGAATGGCTTGCCTATATCTCTTACAGTGGGAGAACCAAGTCTAATCCCTCTCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCC  180
V  89.6% (224/250)  IGHV4-61*01  139  .....G...A...GG.......A............C.....C.AC..C.....C....................A...G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  V  D  T  V  F  S  F 
                    Query_12861  181  AAGAACCAATTCTCCCTGAGGCTGACTTCCGTGACCGCTGCGGACACGGCCGTTTATTTCTGTGCGAGAGTGGACACAGTTTTTAGTTTC  270
V  89.6% (224/250)  IGHV4-61*01  229  ........G..........A.....GC..T.......................G....A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-3*01   10   -------------------------------------------------------------------------------.....------  14

                                      ----------->                                  
                                       H  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12861  271  CACTTCGACCCCTGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ5*02     9    ---.......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_261881

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           302     3e-84
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTTTC	GATAGTAGTGGTTATTAC	CAATCCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTTCGATAGTAGTGGTTATTACCAATCCAACTACTACTTTGGCATGGACGTC	ARVFDSSGYYQSNYYFGMDV	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	10	1	0	90.9
CDR1-IMGT	27	50	24	18	6	0	75
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	125	24	20	4	0	83.3
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	231	212	19	0	91.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  I  F  S  N  Y  F  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  S  I  
                    Query_12862  16   GTACAGCCTCTGGATTCATCTTCAGCAATTATTTCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCGCATCCATTA  105
V  91.8% (212/231)  IGHV3-21*01  65   ..G...............C......T.GC...AG.....A........................................T.........  154
                                         A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  G  S  R  F  I  F  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  S  L  
                    Query_12862  106  GTAGTGGTAGTCGTTTCATCTTCTACGGAGACTCAGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCAAGAACTCACTGTCTCTGC  195
V  91.8% (212/231)  IGHV3-21*01  155  .....A.....A...A...A.A.....C.................................A......................A.....  244
                                      S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-------------------------CDR3-IMGT-----------
                                      Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  F  D  S  S  G  Y  Y  Q  S  N  Y  Y  
                    Query_12862  196  AAATGAGTAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGTTTTCGATAGTAGTGGTTATTACCAATCCAACTACTACT  285
V  91.8% (212/231)  IGHV3-21*01  245  ......AC...........................................---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (18/18)   IGHD3-22*01  11   --------------------------------------------------------..................----------------  28
J  94.6% (53/56)    IGHJ6*02     7    ---------------------------------------------------------------------------------.........  15

                                      ------------->                                 
                                      F  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12862  286  TTGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  94.6% (53/56)    IGHJ6*02     16   AC..T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_198151

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           382     4e-108
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	267	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  V  Y  R  F  T  N  H
                    Query_12863  1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGTATACAGATTTACCAATCA  90
V  92.1% (267/290)  IGHV5-51*01  6    ....................C........A.....................G.........A......C..G......C.......GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  P
                    Query_12863  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCCC  180
V  92.1% (267/290)  IGHV5-51*01  96   ...................................................G.......A.....G.......G....C.....C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  A
                    Query_12863  181  GTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCGC  270
V  92.1% (267/290)  IGHV5-51*01  186  ...............G........C...................................G.......G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_12863  271  CTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  350
V  92.1% (267/290)  IGHV5-51*01  276  .A.......C.....G....------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    -----------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_154789

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD5-18*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTCCG	ACACCTATGGTTAC	GAGTCCCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACTCCGACACCTATGGTTACGAGTCCCTCTTTGACTAC	AKDSDTYGYESLFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12864  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTATGCCCTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   .............................................G.......A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  G  G  A  T  Y  Y  A  G  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12864  91   AGTGGGTCTCAACTATTAGTGGTAGTGGTGGTGCCACGTACTACGCAGGCTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCC  180
V  93.6% (234/250)  IGHV3-23*01  137  ...........G....................AG...A..........A........................................A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  D  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  K  D  S  D  T  Y  G  Y  
                    Query_12864  181  GGGACTCGTTGTTTCTACAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTATATTTCTGTGCGAAAGACTCCGACACCTATGGTTACG  270
V  93.6% (234/250)  IGHV3-23*01  227  A.A..A..C...A...G...................C....................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD5-18*01  7    ---------------------------------------------------------------------------...G..........-  20

                                      ---------------->                                  
                                      E  S  L  F  D  Y  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_12864  271  AGTCCCTCTTTGACTACTGGGGCCAGGGAACCCTGGCCACCGTCTCCTCAG  321
J  97.7% (43/44)    IGHJ4*02     5    -------.............................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_261885

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           305     3e-85
IGHD7-27*01                                                                                           18.0    0.59 
IGHJ3*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCGACTTGAAC	AACTGGGGA	TGGGCAGGGGAGGGTGTTTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCGACTTGAACAACTGGGGATGGGCAGGGGAGGGTGTTTATGATGTC	ATDLNNWGWAGEGVYDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	218	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  I  S  R  Y  Y  W  N  W  I  R  Q  P  P  G  K  A  M  E 
                    Query_12865  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGCCTCCATCAGTCGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGCAATGGAG  90
V  90.5% (218/241)  IGHV4-59*01  49   ...................C...........G..........A............G..........................G.C.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  T  Y  H  T  G  D  T  D  Y  N  P  S  L  R  N  R  V  A  I  S  M  D  A  S  K  N 
                    Query_12865  91   TGGATCGGATATACCTATCACACTGGGGACACCGACTACAACCCCTCCCTCAGGAATCGAGTCGCCATATCAATGGACGCGTCCAAGAAC  180
V  90.5% (218/241)  IGHV4-59*01  139  .....T..G....T....T...G....AG....A..................A..G.......A........G.A...A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  D  L  N  N  W  G  W  A  G 
                    Query_12865  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACGGCTGCGGACACGGCCGTATACTACTGTGCGACCGACTTGAACAACTGGGGATGGGCAGGG  270
V  90.5% (218/241)  IGHV4-59*01  229  .............................C.................G..T..........-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (9/9)     IGHD7-27*01  3    ------------------------------------------------------------------------.........---------  11

                                      ----------------->                               
                                       E  G  V  Y  D  V  W  G  Q  G  R  M  V  T  V  S  
                    Query_12865  271  GAGGGTGTTTATGATGTCTGGGGCCAAGGGAGAATGGTCACCGTCTCTT  319
J  97.4% (37/38)    IGHJ3*01     10   -----------....................C.................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_261886

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           333     1e-93
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAGTACCAA	ATAGCAGT	CCAATACCCACC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCCAGTACCAAATAGCAGTCCAATACCCACCCTTTGACTTC	VRGQYQIAVQYPPFDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  L  T  D  Y  A  M  Y  W  V  R  Q  A  P  G  K  G  P  
                    Query_12866  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTGACTGACTATGCAATGTACTGGGTCCGCCAGGCTCCAGGCAAGGGGCCGG  90
V  92.8% (231/249)  IGHV3-30*03  47   ....................................C...C.G.AG.....GC...C..............................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  H  G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  
                    Query_12866  91   AGTGGGTGGCCCTTATATCATATCATGGAAGTAATAAATTCTATGCAGACTCCGTGAAGGGCCGATTTACCATCTCCAGAGACATTTCCA  180
V  92.8% (231/249)  IGHV3-30*03  137  ..........AG...........G...............A...........................C................A.....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  G  Q  Y  Q  I  A  V  
                    Query_12866  181  AGAGCACGCTATATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGTGAGAGGCCAGTACCAAATAGCAGTCC  270
V  92.8% (231/249)  IGHV3-30*03  227  ...A......G....................................................C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  5    --------------------------------------------------------------------------------........--  12

                                      T------------------>                                  
                                      Q  Y  P  P  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12866  271  AATACCCACCCTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.7% (43/44)    IGHJ4*02     5    ----------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_198154

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            315     5e-88
IGHD2-21*01                                                                                           10.3    112  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCG	ATTCC	GTGCCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGATTCCGTGCCCCCTAC	ARRFRAPY	241	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	20	7	0	74.1
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	223	22	0	91


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  G  V  S  D  G  S  I  D  S  S  G  W  W  I  W  V  R  Q  P  P  G  K  G  L 
                    Query_12867  1    ACCCTGTCCCTCACCTGCGGTGTCTCTGATGGCTCCATCGACTCTAGTGGCTGGTGGATTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.0% (223/245)  IGHV4-4*02   49   ...................C........G..........AG.AG....AA........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  T  H  H  T  G  T  T  N  Y  N  S  S  L  Q  S  R  V  T  I  S  L  D  K  S  K 
                    Query_12867  91   GAGTGGATTGGGGAAACCCATCACACTGGGACCACCAACTACAACTCGTCCCTCCAGAGTCGAGTCACCATATCACTAGACAAGTCCAAG  180
V  91.0% (223/245)  IGHV4-4*02   139  ................T.T....T.G.....G.............C........A....................G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------CDR3-IMGT------>      
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  F  R  A  P  Y  W  G 
                    Query_12867  181  AATCAGTTCTCCCTAAACCTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGCGAGGCGATTCCGTGCCCCCTACTGGGGC  270
V  91.0% (223/245)  IGHV4-4*02   229  ..C...........G..G....G.................................C........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (5/5)     IGHD2-21*01  24   --------------------------------------------------------------------.....-----------------  28
J  97.2% (35/36)    IGHJ4*02     11   --------------------------------------------------------------------------------..........  20

                                                                
                                       Q  G  I  L  V  T  V  S  S
                    Query_12867  271  CAGGGAATCCTGGTCACCGTCTCCTC  296
J  97.2% (35/36)    IGHJ4*02     21   .......C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_325664

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           325     2e-91
IGHD6-25*01                                                                                           10.3    116  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GCCGGGATT	CAGCG	AAATCAGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGCCGGGATTCAGCGAAATCAGGCTAC	ATGRDSAKSGY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  Y  H  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_12868  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACTGTCAGCAGCTACCACATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTG  90
V  92.3% (227/246)  IGHV3-53*01  47   .....................................C.....T...A..T......G..............................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  T  I  Y  I  D  A  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  K  
                    Query_12868  91   AGTGGGTCTCAACTATCTATATCGATGCTACCACATACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACTATTCCAAGA  180
V  92.3% (227/246)  IGHV3-53*01  137  ...........GT...T....G..G..G..G............A....................................A.........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  T  G  R  D  S  A  K  S  G  
                    Query_12868  181  ACACACTGTATCTTCAGATGAACACCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGACAGGCCGGGATTCAGCGAAATCAGGCT  270
V  92.3% (227/246)  IGHV3-53*01  227  ....G...........A.......G......................................G..------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (5/5)     IGHD6-25*01  9    ---------------------------------------------------------------------------.....----------  13
J  100.0% (38/38)   IGHJ4*02     11   ----------------------------------------------------------------------------------------..  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12868  271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (38/38)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_311363

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTCC	AKDNTYSSGYSPLDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  L  R  Q  A  P  G  K  G  P  
                    Query_12869  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGCTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  92.0% (230/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...G........................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  S  G  S  S  T  H  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_12869  91   AGTGGGTCTCAGCGATTACTGGGAGTGGTAGTAGTACACACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  92.0% (230/250)  IGHV3-23*01  137  .............T....G...T......G....C...T.....G......................................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  M  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_12869  181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGTCGAGGACACGGCCATGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  92.0% (230/250)  IGHV3-23*01  227  ...............................G....C.............G.A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12869  271  ATTCACCCCTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  97.6% (41/42)    IGHJ4*02     7    ---------......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_991

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           329     3e-92
IGHD3-22*01                                                                                           21.8    0.040
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGAA	AGTGGTTATTA	N/A	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGAAAGTGGTTATTATGAAGCTTTTGATATG	ARSESGYYEAFDM	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  L  S  N  Y  D  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12870  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCCTCAGCAACTATGATATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.3% (229/248)  IGHV3-30*04  47   ...................................A..T....T.G.....C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  I  I  S  Y  D  G  G  N  K  N  Y  A  D  S  V  R  G  R  F  T  L  S  R  D  N  S  
                    Query_12870  91   AGTGGGTATCAATTATATCATATGATGGAGGAAATAAAAATTACGCAGACTCCGTGAGGGGCCGATTCACCTTGTCCAGAGACAATTCCA  180
V  92.3% (229/248)  IGHV3-30*04  137  .......GG..G.................A.T......T.C................A.............A.C................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  F  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  E  S  G  Y  Y  E  
                    Query_12870  181  AGAACACGCTGTTTCTGCAAATGAACAACCTGCGCGCTGAGGACACGGCTGTGTATTACTGTGCGAGATCGGAAAGTGGTTATTATGAAG  270
V  92.3% (229/248)  IGHV3-30*04  227  ............A..............G....A.A.................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD3-22*01  17   --------------------------------------------------------------------------...........-----  27
J  88.0% (44/50)    IGHJ3*02     1    -------------------------------------------------------------------------------------...T.  5

                                      ---------->                                  
                                      A  F  D  M  W  G  P  G  T  V  V  T  V  A  S  
                    Query_12870  271  CTTTTGATATGTGGGGCCCAGGGACAGTGGTCACCGTCGCCTCAG  315
J  88.0% (44/50)    IGHJ3*02     6    ..........C.......A.......A...........T.T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_39692

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           322     2e-90
IGHD6-19*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTAATGGGAGAC	CAGTGGCTG	AGACGTCCACACTTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTAATGGGAGACCAGTGGCTGAGACGTCCACACTTCCTTGACTCC	ARDVMGDQWLRRPHFLDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12871  1    GGTCCCTGAGACTCTCCTGTTCAGCGTCTGGATTTACCTTTAGTCGCTATGGCATGCACTGGGTCCGCCAGGCTCCGGGCAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-33*01  47   ....................G.............C.....C...A...............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  Y  D  G  S  D  E  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12871  91   AGTGGCTGGCAGTTATTTCGTATGATGGAAGTGATGAAAACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  91.2% (228/250)  IGHV3-33*01  137  .....G..........A.G.............A..A..T...................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  H  T  I  D  L  Q  M  N  S  L  R  V  E  D  T  A  I  Y  Y  C  A  R  D  V  M  G  D  Q  W  
                    Query_12871  181  GGCACACGATTGACCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTATTTATTATTGTGCGAGAGATGTAATGGGAGACCAGTGGC  270
V  91.2% (228/250)  IGHV3-33*01  227  A.A.....C.GT.T......................C...G.........G.G.....C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-19*01  9    -----------------------------------------------------------------------------------.......  15

                                      IMGT--------------------->                                
                                      L  R  R  P  H  F  L  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12871  271  TGAGACGTCCACACTTCCTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  328
D  100.0% (9/9)     IGHD6-19*01  16   ..--------------------------------------------------------  17
J  97.5% (39/40)    IGHJ4*02     7    ------------------......A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_39691

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           372     2e-105
IGHD6-19*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGAT	GAGGGATGA	CAGTGGCTGGTAC	CGGGACGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGATGAGGGATGACAGTGGCTGGTACCGGGACGGTTTTGACTCC	ARMRDDSGWYRDGFDS	263	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	45	1	0	97.8
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	49	2	0	96.1
CDR2-IMGT	128	148	21	20	1	0	95.2
FR3-IMGT	149	262	114	106	8	0	93
CDR3-IMGT (germline)	263	270	8	8	0	0	100
Total	N/A	N/A	270	254	16	0	94.1


Alignments

                                      <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  T  T  S  G  M  S  V  S  W  I  R
                    Query_12872  1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCACCTTCTCTGGGTTCTCACTCACCACCAGTGGGATGTCTGTGAGTTGGATCCG  90
V  94.1% (254/270)  IGHV2-70*01  30   ...........................A...............................G...T.....A....G......C........  119
                                        L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R

                                      -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                        Q  P  P  G  K  A  L  E  W  L  A  L  V  D  W  D  D  D  K  Y  Y  I  P  S  L  K  A  R  L  T
                    Query_12872  91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCGCTCGTTGATTGGGATGATGATAAATACTACATCCCATCTCTGAAGGCCAGGCTCAC  180
V  94.1% (254/270)  IGHV2-70*01  120  .................................A...A...........................G.A...........A..........  209
                                        Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T

                                      ---------------------FR3-IMGT----------------------------------------------------><-------
                                        I  S  Q  D  T  S  K  N  Q  V  V  L  K  M  T  N  M  D  P  A  D  T  G  T  Y  Y  C  A  R  M
                    Query_12872  181  CATCTCCCAGGACACCTCCAAAAACCAGGTGGTCCTTAAAATGACCAACATGGACCCTGCGGACACAGGCACCTATTACTGTGCACGGAT  270
V  94.1% (254/270)  IGHV2-70*01  210  .......A..............................C....................T........C...G.................  299
                                        I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                      ------------CDR3-IMGT------------------>                                 
                                        R  D  D  S  G  W  Y  R  D  G  F  D  S  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_12872  271  GAGGGATGACAGTGGCTGGTACCGGGACGGTTTTGACTCCTGGGGACAGGGAACCCTGGTCACCGTCTCCTCA  343
D  100.0% (13/13)   IGHD6-19*01  9    ---------.............---------------------------------------------------  21
J  95.2% (40/42)    IGHJ4*02     6    -------------------------------.......A......C...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_313792

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           371     7e-105
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              100     2e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTAGA	TCAGGA	TGTACTAATACCAGCTGCT	CTCCGGAT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTAGATCAGGATGTACTAATACCAGCTGCTCTCCGGATCTACTACTACGGTTTGGACGTC	AVDQDVLIPAALRIYYYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	251	8	6	2	0	75
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  V  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_12873  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTGTTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  97.2% (244/251)  IGHV4-61*08  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  S  G  I  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12873  91   CTGGAGTGGATTGGGTATATCTATAACAGTGGGATCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  97.2% (244/251)  IGHV4-61*08  139  ........................T.........G.......................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       T  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  V  D  Q  D  V  L  I  P 
                    Query_12873  181  ACGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGGTAGATCAGGATGTACTAATACCA  270
V  97.2% (244/251)  IGHV4-61*08  229  .A.......................G........................................AG...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.5% (17/19)    IGHD2-2*01   8    -----------------------------------------------------------------------------....G..G.....  20

                                      CDR3-IMGT-------------------------->                                 
                                       A  A  L  R  I  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12873  271  GCTGCTCTCCGGATCTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  339
D  89.5% (17/19)    IGHD2-2*01   21   ......---------------------------------------------------------------  26
J  98.2% (54/55)    IGHJ6*02     8    --------------.............A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_144332

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           445     2e-127
IGHD3-22*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              108     9e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCCGT	TGGTTAT	AATTCCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTC	ARAVGYNSDYYYGMDV	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	72	2	0	97.3
CDR1-IMGT	77	100	24	24	0	0	100
FR2-IMGT	101	151	51	51	0	0	100
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	112	2	0	98.2
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	289	4	0	98.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_12874  3    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  92
V  98.6% (289/293)  IGHV5-51*01  2    ....G.....G...............................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_12874  93   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  182
V  98.6% (289/293)  IGHV5-51*01  92   ..........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  P  S  F  Q  G  Q  V  T  I  S  A  D  K  A  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_12874  183  GACCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGGCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  98.6% (289/293)  IGHV5-51*01  182  .C.......................................T................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      T  A  M  Y  Y  C  A  R  A  V  G  Y  N  S  D  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  
                    Query_12874  273  CCGCCATGTATTACTGTGCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCG  362
V  98.6% (289/293)  IGHV5-51*01  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD3-22*01  19   ----------------------------.......-------------------------------------------------------  25
J  100.0% (56/56)   IGHJ6*02     7    ------------------------------------------................................................  54

                                              
                                      V  S  S 
                    Query_12874  363  TCTCCTCA  370
J  100.0% (56/56)   IGHJ6*02     55   ........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_211596

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           315     5e-88
IGHD2-8*02                                                                                            14.1    8.4  
IGHJ6*02                                                                                              104     1e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCGAG	TATTGTCCTG	ATAGTTACTG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCGAGTATTGTCCTGATAGTTACTGCTACTACTACAACGGTATGGACGTC	ARFEYCPDSYCYYYNGMDV	230	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	23	1	0	95.8
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	22	2	0	91.7
FR3-IMGT	116	229	114	108	6	0	94.7
CDR3-IMGT (germline)	230	235	6	6	0	0	100
Total	N/A	N/A	223	212	11	0	95.1


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  G  P  G  K  G  L  E  W  V  A  L  I  W  H  D
                    Query_12875  13   GTCTGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGGTCCAGGCAAGGGGCTGGAGTGGGTGGCACTTATATGGCATGA  102
V  95.1% (212/223)  IGHV3-33*01  72   ....................G..........................C............................G........T....  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  R  Y  C  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N
                    Query_12875  103  TGGAAGTAATAGATATTGCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTGCAAATGAA  192
V  95.1% (212/223)  IGHV3-33*01  162  ...........A...C.AT.......................................................................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------------CDR3-IMGT--------------------
                                        S  L  R  A  E  D  T  A  V  Y  H  C  A  R  F  E  Y  C  P  D  S  Y  C  Y  Y  Y  N  G  M  D
                    Query_12875  193  CAGCCTGCGAGCCGAGGACACGGCTGTGTATCATTGTGCGAGATTCGAGTATTGTCCTGATAGTTACTGCTACTACTACAACGGTATGGA  282
V  95.1% (212/223)  IGHV3-33*01  252  .......A.......................T.C.........-----------------------------------------------  294
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  90.0% (9/10)     IGHD2-8*02   5    -------------------------------------------------......A...-------------------------------  14
J  98.2% (56/57)    IGHJ6*02     5    ---------------------------------------------------------------------..........T..........  25

                                      --->                                
                                        V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_12875  283  CGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  318
J  98.2% (56/57)    IGHJ6*02     26   ....................................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_208468

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           294     6e-82
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACG	TACGGTGAC	CCTACACTCCCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACGTACGGTGACCCTACACTCCCATACTTTGACTCT	ARTYGDPTLPYFDS	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  M  S  S  G  G  Y  L  W  S  W  I  R  Q  N  P  G  K  G 
                    Query_12876  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCTATGAGCAGTGGCGGCTATCTCTGGAGCTGGATCCGCCAAAACCCAGGGAAGGGC  90
V  87.9% (218/248)  IGHV4-31*03  49   ...............................G...C..C........T..T..CTA..................GC..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  T  S  Y  Y  S  P  S  L  K  R  R  L  T  I  S  V  G  T  S 
                    Query_12876  91   CTGGAGTGGATTGGGAGCATCTATTACAGTGGAACCTCCTACTACAGCCCGTCCCTCAAGAGGCGACTTACAATATCAGTAGGCACTTCT  180
V  87.9% (218/248)  IGHV4-31*03  139  ...............TA...............G.G.A.........A...............T...G....C..........A...G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       E  K  H  F  S  L  K  L  T  S  M  T  A  A  D  T  A  I  Y  F  C  A  R  T  Y  G  D  P  T  L 
                    Query_12876  181  GAGAAGCACTTCTCCCTGAAGCTGACCTCTATGACTGCCGCGGACACGGCCATATATTTTTGTGCGAGGACGTACGGTGACCCTACACTC  270
V  87.9% (218/248)  IGHV4-31*03  229  A....C..G................G....G....................G.G....AC........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (9/9)     IGHD4-17*01  5    ------------------------------------------------------------------------.........---------  13

                                      -------------->                                  
                                       P  Y  F  D  S  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_12876  271  CCATACTTTGACTCTTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  319
J  93.5% (43/46)    IGHJ4*02     3    ---..........AC.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_82619

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           417     6e-119
IGHD2-2*01                                                                                            21.8    0.045 
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCCG	GTAGTACCAGC	GACCTGGAGTT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCCGGTAGTACCAGCGACCTGGAGTTTGGACGTC	ARFPVVPATWSLDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_12877  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  96.2% (278/289)  IGHV1-69*01  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        T  I  S  W  V  R  Q  G  P  G  Q  G  L  E  W  M  G  G  I  K  P  S  F  G  T  T  N  Y  A  Q
                    Query_12877  91   TACTATCAGCTGGGTGCGACAGGGCCCTGGACAAGGTCTTGAGTGGATGGGAGGGATCAAGCCTAGCTTTGGAACAACAAACTACGCACA  180
V  96.2% (278/289)  IGHV1-69*01  96   .G.....................C............G......................TC....T......T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_12877  181  GAAGTTCCAGGACAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGTAGCCTGAGATCTGAGGACACGGC  270
V  96.2% (278/289)  IGHV1-69*01  186  ...........G......................................................C.......................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                 
                                        V  Y  Y  C  A  R  F  P  V  V  P  A  T  W  S  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12877  271  CGTGTATTACTGTGCGAGATTCCCGGTAGTACCAGCGACCTGGAGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  358
V  96.2% (278/289)  IGHV1-69*01  276  ...................---------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                      
D  100.0% (11/11)   IGHD2-2*01   12   -------------------------...........----------------------------------------------------  22
J  100.0% (41/41)   IGHJ6*02     22   -----------------------------------------------.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_309416

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           338     5e-95
IGHD3-22*01                                                                                           39.1    3e-07
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCCCA	TATTATTATGACAGTAGTGGTTATTA	TCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCCCATATTATTATGACAGTAGTGGTTATTATCAGGCCTTTGACTTC	ARDGPYYYDSSGYYQAFDF	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  G  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12878  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGATATGGAATGAACTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-48*03  47   ..............................................T....A...............C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  P  S  D  D  S  I  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_12878  91   AGTGGATTTCATACATTAGTCCTAGTGATGATAGCATATACTACGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  93.2% (233/250)  IGHV3-48*03  137  .....G..............AG.....G.AG..C..................T..................A..................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      N  K  L  L  S  L  Q  M  N  S  L  R  A  E  D  T  G  V  Y  Y  C  A  R  D  G  P  Y  Y  Y  D  
                    Query_12878  181  ACAAATTACTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGGTGTTTATTACTGTGCGAGAGATGGCCCATATTATTATGACA  270
V  93.2% (233/250)  IGHV3-48*03  227  .G..C.C.....A...................................C.....................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (24/26)    IGHD3-22*01  2    -----------------------------------------------------------------------------.....C.....T.  14

                                      -IMGT----------------------->                                  
                                      S  S  G  Y  Y  Q  A  F  D  F  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_12878  271  GTAGTGGTTATTATCAGGCCTTTGACTTCTGGGGCCAGGGATCCCTGGTCATCGTCTCCTCAG  333
D  92.3% (24/26)    IGHD3-22*01  15   .............--------------------------------------------------  27
J  93.2% (41/44)    IGHJ4*02     5    -------------------........A.............A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_211593

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           282     4e-78
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	217	27	6	86.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_12879  4    CCCTGAGACTCTCCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.8% (217/250)  IGHV4-34*01  50   .....TCC...A..........C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_12879  94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.8% (217/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_12879  184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.8% (217/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_12879  274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_336728

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           316     2e-88
IGHD2-8*01                                                                                            43.0    2e-08
IGHJ5*01                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD2-8*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGTTA	AGGA	AGGACATTGTACTAACGGTGTATGCTAT	CCCGAGGGTGTC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGTTAAGGAAGGACATTGTACTAACGGTGTATGCTATCCCGAGGGTGTCTTCGACTCC	AKVKEGHCTNGVCYPEGVFDS	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	252	10	9	1	0	90
Total	N/A	N/A	252	227	25	0	90.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  N  Y  S  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12880  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATAATTATTCTATTCACTGGGTCCGCCAAGCTCCGGGGAAGGGTCTGG  90
V  90.1% (227/252)  IGHV3-43*01  47   ............................................G.....A.C..G...........T......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  I  N  W  N  G  G  K  T  Y  Y  A  D  S  I  K  D  R  V  T  I  S  R  D  N  S  
                    Query_12880  91   AGTGGGTCTCTCTTATTAATTGGAATGGCGGGAAGACATATTATGCAGACTCCATTAAGGACCGAGTCACCATCTCCAGAGACAACAGCC  180
V  90.1% (227/252)  IGHV3-43*01  137  ..................G....G....T..T.GC.....C...........TG.G....G....T.......................A  226
                                      E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      Q  K  S  L  F  L  Q  M  N  S  L  K  A  E  E  T  A  F  Y  Y  C  A  K  V  K  E  G  H  C  T  
                    Query_12880  181  AAAAGTCCCTGTTTCTGCAAATGAACAGTCTGAAAGCTGAGGAAACCGCCTTTTATTACTGTGCAAAAGTTAAGGAAGGACATTGTACTA  270
V  90.1% (227/252)  IGHV3-43*01  227  ....C.......A....................G.A.......C........G................A..------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A  K  D                    
D  92.9% (26/28)    IGHD2-8*01   1    ----------------------------------------------------------------------------....T.........  14

                                      DR3-IMGT-------------------------->                              
                                      N  G  V  C  Y  P  E  G  V  F  D  S  W  G  Q  G  T  V  V  T  V  S 
                    Query_12880  271  ACGGTGTATGCTATCCCGAGGGTGTCTTCGACTCCTGGGGCCAGGGAACCGTGGTGACTGTCTCC  335
D  92.9% (26/28)    IGHD2-8*01   15   .T............---------------------------------------------------  28
J  89.7% (35/39)    IGHJ5*01     9    --------------------------.................A......C....C..C......  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_216458

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           396     2e-112
IGHD1-26*01                                                                                           27.6    9e-04 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  T  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  N  Y
                    Query_12881  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGACAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAATTA  90
V  93.5% (272/291)  IGHV5-51*01  6    .............................A...................................G....................GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  V  G  I  M  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_12881  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGGTGGGGATCATGTATCCTGGTGACTCTGATACCAGATATAGCCC  180
V  93.5% (272/291)  IGHV5-51*01  96   ........G.....................................A..........C..........................C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  R  A  W  D  T  A
                    Query_12881  181  GTCTTTCGAGGGCCACGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTATTTGCAGTGGAGGAGCCTGAGGGCCTGGGACACCGC  270
V  93.5% (272/291)  IGHV5-51*01  186  ...C...C.A.....G......................................CC..........C.......A.....C.........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  F  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  P  G  T  T  V
                    Query_12881  271  CATATATTTCTGTGCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTCTGGGGCCCGGGGACCACGGT  360
V  93.5% (272/291)  IGHV5-51*01  276  ...G....A............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (14/14)   IGHD1-26*01  4    -----------------------------..............-----------------------------------------------  17
J  93.0% (53/57)    IGHJ6*02     6    ----------------------------------------------.......A......T................AA...........  49

                                                   
                                        T  V  S  S 
                    Query_12881  361  CACCGTCTCCTCA  373
J  93.0% (53/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_82611

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           399     3e-113
IGHD6-6*01                                                                                            18.0    0.64  
IGHJ3*01                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-6*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGAC	TATAGCAGGTCG	ATTG	GATGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACTATAGCAGGTCGATTGGATGTTTTTGATGTC	AKTIAGRLDVFDV	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	271	16	0	94.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  T  K  P  G  S  S  V  K  V  S  C  K  T  S  G  G  T  F  S  S  Y
                    Query_12882  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGACGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACTTCTGGCGGCACCTTCAGCAGCTA  90
V  94.4% (271/287)  IGHV1-69*01  6    ..................G..........A..................................G.......A.................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  G  P  G  Q  G  L  E  W  M  G  G  I  I  P  T  F  G  S  A  N  Y  A  Q
                    Query_12882  91   TGCTATCAGCTGGGTGCGACAGGGCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCAACCTTTGGTTCAGCAAACTACGCACA  180
V  94.4% (271/287)  IGHV1-69*01  96   .......................C.......................................T.T.......A................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  R  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  D  L  R  S  L  R  S  D  D  T  A
                    Query_12882  181  GAACTTCCGGGGCAGAGTCACAATTACCGCGGACGAATCCACGAGCACAGCGTACATGGACCTGCGCAGCCTGAGATCTGACGACACGGC  270
V  94.4% (271/287)  IGHV1-69*01  186  ...G....A............G.............................C........G...A................G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  F  C  A  K  T  I  A  G  R  L  D  V  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12882  271  CGTGTATTTCTGTGCGAAGACTATAGCAGGTCGATTGGATGTTTTTGATGTCTGGGGCCAGGGGACCATGGTCACCGTCTCTTCAG  356
V  94.4% (271/287)  IGHV1-69*01  276  ........A........---------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                       
D  91.7% (11/12)    IGHD6-6*01   4    ---------------------........C...-----------------------------------------------------  15
J  93.9% (46/49)    IGHJ3*01     2    -------------------------------------....C..................A.....A...................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_336727

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD2-2*01                                                                                            21.8    0.046 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAGTAGTGAA	TACCAGCTGCT	GTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCC	ARSSSEYQLLFWFDP	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  P  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_12883  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCCGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCAGCTA  90
V  95.8% (277/289)  IGHV5-51*03  6    ...............................................T.................G............C...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_12883  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATATATCCTGGTGACTCTGATGCCAGATATAGTCC  180
V  95.8% (277/289)  IGHV5-51*03  96   .........................................................C..................A.......C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  K  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12883  181  GTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTCAAGGCCTCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  .......C.....................C..........................................G.................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  S  S  E  Y  Q  L  L  F  W  F  D  P  W  G  Q  G  T  L  V  T  V  T  S
                    Query_12883  271  CATGTATTATTGCGCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCACCTC  360
V  95.8% (277/289)  IGHV5-51*03  276  .........C..T......-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (11/11)   IGHD2-2*01   16   -------------------------------...........------------------------------------------------  26
J  97.9% (46/47)    IGHJ5*02     5    ---------------------------------------------........................................T....  49

                                        
                                        
                    Query_12883  361  AG  362
J  97.9% (46/47)    IGHJ5*02     50   ..  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_336724

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     2e-87
IGHD3-3*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TCGTCAAGATCGCAGTCTTTATCGCTACCTCA	GAGTGGTT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATCGTCAAGATCGCAGTCTTTATCGCTACCTCAGAGTGGTTTTTGACCTC	AKDRQDRSLYRYLRVVFDL	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         F  L  R  L  S  C  E  A  S  G  F  T  F  S  S  Y  V  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12884  1    GGTTCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTAGCAGCTATGTCATGAGCTGGGTTCGGCAGGCTCCAGGGAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-23*01  47   ...C.................C.............................C............C..C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  S  E  S  G  V  S  T  Y  I  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12884  91   AGTGGGTCGCAGCTATTAGCGAAAGTGGCGTCAGTACATATATCGCGGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  90.0% (225/250)  IGHV3-23*01  137  ........T..........T.GT.....T.GT..C.....CTA...A...........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      N  N  T  I  Y  L  Q  M  S  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  R  Q  D  R  S  L  
                    Query_12884  181  ACAACACGATATATCTGCAAATGTCCAGCCTGAGAGCCGAGGACACGGCCCTTTATTACTGTGCGAAGGATCGTCAAGATCGCAGTCTTT  270
V  90.0% (225/250)  IGHV3-23*01  227  .G......C.G............AA.........................G.A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Y  R  Y  L  R  V  V  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12884  271  ATCGCTACCTCAGAGTGGTTTTTGACCTCTGGGGCCAGGGAACCCTGGTCACAGTCTCCTCAG  333
D  100.0% (8/8)     IGHD3-3*01   16   ------------........-------------------------------------------  23
J  93.0% (40/43)    IGHJ4*02     6    --------------------......TA........................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_82612

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD2-2*01                                                                                            14.1    8.6   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCACCA	CTATGCC	TATGCCGGCGGGGGATATG	TTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACCACTATGCCTATGCCGGCGGGGGATATGTTGAATCC	ARGHHYAYAGGGYVES	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  T  W  I  R  Q  H  P  G  K  A 
                    Query_12885  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGCC  90
V  96.8% (242/250)  IGHV4-31*03  49   .............................................................G..........................G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       P  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  T  S 
                    Query_12885  91   CCGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCAGTAGACACGTCT  180
V  96.8% (242/250)  IGHV4-31*03  139  .T..................................................................T.C...................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  H  Y  A  Y  A 
                    Query_12885  181  AAAAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGGTCACCACTATGCCTATGCC  270
V  96.8% (242/250)  IGHV4-31*03  229  ..G.......................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD2-2*01   25   -----------------------------------------------------------------------------.......------  31

                                      GT------------------>                                  
                                       G  G  G  Y  V  E  S  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_12885  271  GGCGGGGGATATGTTGAATCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  325
J  92.9% (39/42)    IGHJ4*02     7    -------------....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_82615

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           266     2e-73
IGHD4-17*01                                                                                           14.1    8.6  
IGHJ2*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATCTGGAAACAAA	TGACTGCGGT	CCGGGCAGTCAATGC	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATCTGGAAACAAATGACTGCGGTCCGGGCAGTCAATGCCTTCGATCCC	ARIWKQMTAVRAVNAFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	98	16	0	86
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	206	36	0	85.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  G  V  S  G  G  S  V  S  N  N  H  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_12886  4    CCCTGAGACTCTCCTGTGGTGTCTCTGGTGGGTCCGTCAGTAACAATCACTGGAGCTGGATCCGCCAGCCCCCCGGGAAGGGGCTGGAGT  93
V  85.1% (206/242)  IGHV4-34*01  50   .....TCC...A....C.C.....A..........T.....GGTT.CT.........................A................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  E  V  S  D  S  G  T  T  N  F  N  P  S  L  K  D  R  L  T  L  S  V  D  T  S  N  N  
                    Query_12886  94   GGCTTGGGGAAGTCAGTGATAGTGGAACCACCAACTTCAACCCGTCTCTCAAGGATCGCCTGACTCTATCAGTAGACACGTCCAACAACC  183
V  85.1% (206/242)  IGHV4-34*01  140  ..A........A...A.C.........G........A.........C......AG...AG.C..CA...................G....  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  K  L  S  S  V  T  A  A  A  T  A  V  Y  F  C  A  R  I  W  K  Q  M  T  A  V  R  
                    Query_12886  184  AGTTCTCCCTGAAGTTAAGTTCTGTGACCGCCGCGGCCACGGCTGTATATTTCTGTGCGAGAATCTGGAAACAAATGACTGCGGTCCGGG  273
V  85.1% (206/242)  IGHV4-34*01  230  ..............C.G..C................A.........G....A..........----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  90.0% (9/10)     IGHD4-17*01  1    ---------------------------------------------------------------------------.....A....-----  10

                                      ------------------->                                  
                                      A  V  N  A  F  D  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_12886  274  CAGTCAATGCCTTCGATCCCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  327
J  97.7% (43/44)    IGHJ2*01     10   ----------........T...................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_336723

Length=408
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           434     5e-124
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGCCTACTTTCTTAGTTGGGGTTACTCTGGTA	GTATAACAGCAGCTGG	CGAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTAC	ARHAYFLSWGYSGSITAAGEIDY	283	351	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	69	69	68	1	0	98.6
CDR1-IMGT	70	93	24	21	3	0	87.5
FR2-IMGT	94	144	51	51	0	0	100
CDR2-IMGT	145	168	24	23	1	0	95.8
FR3-IMGT	169	282	114	113	1	0	99.1
CDR3-IMGT (germline)	283	290	8	8	0	0	100
Total	N/A	N/A	290	284	6	0	97.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  A  T  Y 
                    Query_12887  1    CAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTGCCACCTAC  90
V  97.9% (284/290)  IGHV5-51*01  7    ...................................C........................................G....A...G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P 
                    Query_12887  91   TGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACAGCCCG  180
V  97.9% (284/290)  IGHV5-51*01  97   ...........................................................................A..............  186
                                       W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A 
                    Query_12887  181  TCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGCC  270
V  97.9% (284/290)  IGHV5-51*01  187  ........................................................................A.................  276
                                       S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A 

                                      -----------><-----------------------------CDR3-IMGT----------------------------->         
                                       M  Y  Y  C  A  R  H  A  Y  F  L  S  W  G  Y  S  G  S  I  T  A  A  G  E  I  D  Y  W  G  Q 
                    Query_12887  271  ATGTATTACTGTGCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTACTGGGGCCAG  360
V  97.9% (284/290)  IGHV5-51*01  277  ....................----------------------------------------------------------------------  296
                                       M  Y  Y  C  A  R                                                                         
D  93.8% (15/16)    IGHD6-13*01  3    ----------------------------------------------------.....G..........----------------------  18
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------.................  23

                                                               
                                       G  T  L  V  T  V  S  S  
                    Query_12887  361  GGAACCCTGGTCACCGTCTCCTCAG  385
J  100.0% (42/42)   IGHJ4*02     24   .........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39972960


Query= Query_336720

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           378     3e-107
IGHD7-27*01                                                                                           18.0    0.65  
IGHJ3*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD7-27*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GG	AACTGGGGA	TCCGCTTCCCGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAACTGGGGATCCGCTTCCCGGGCTTTTGTTATC	ARGNWGSASRAFVI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	266	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  T  S  G  G  T  F  S  N  Y
                    Query_12888  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACTTCTGGAGGCACCTTCAGCAACTA  90
V  91.7% (266/290)  IGHV1-69*06  6    ..................G.............................................G.....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  Y  W  V  R  Q  A  P  A  Q  G  L  E  W  M  G  G  I  F  P  M  F  D  I  T  N  Y  P  Q
                    Query_12888  91   TGCTATCTACTGGGTGCGACAGGCCCCTGCACAAGGGCTTGAGTGGATGGGAGGCATCTTCCCTATGTTTGATATAACAAATTATCCACA  180
V  91.7% (266/290)  IGHV1-69*06  96   .......AG....................G........................G...A.......C....G..C.G....C..CG....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  L  Q  G  R  V  T  I  T  A  D  K  S  T  T  T  A  Y  M  E  L  T  S  L  R  S  E  D  T  A
                    Query_12888  181  GAGTTTGCAGGGCAGAGTCACCATCACCGCGGACAAATCCACGACCACAGCCTACATGGAGCTGACCAGCCTGAGATCTGAGGACACGGC  270
V  91.7% (266/290)  IGHV1-69*06  186  ..AG..C..............G..T...................G....................G........................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  G  N  W  G  S  A  S  R  A  F  V  I  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_12888  271  CATCTATTACTGTGCGAGAGGGAACTGGGGATCCGCTTCCCGGGCTTTTGTTATCTGGGGCCAAGGGACATTGGTCTCCGTCTCTTCAG  359
V  91.7% (266/290)  IGHV1-69*06  276  .G.G................---------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                       
D  100.0% (9/9)     IGHD7-27*01  3    ----------------------.........----------------------------------------------------------  11
J  93.5% (43/46)    IGHJ3*02     5    -------------------------------------------.......A...................A.....A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_336721

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           327     9e-92
IGHD3-3*01                                                                                            39.1    3e-07
IGHJ3*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTCGCCACG	TTACGATTTTTGGAATGGCTATTATA	TTACCAAAAAAGGA	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCGCCACGTTACGATTTTTGGAATGGCTATTATATTACCAAAAAAGGAGCTTTTGATATC	ARESPRYDFWNGYYITKKGAFDI	240	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	228	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  I  S  S  A  N  I  N  W  V  R  Q  P  P  G  K  G  L  
                    Query_12889  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCATCAGTAGCGCCAACATAAACTGGGTCCGCCAGCCTCCCGGGAAGGGGCTGG  90
V  92.3% (228/247)  IGHV3-53*01  47   ......................................G........AA.T....G.G.............G....A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  I  Y  N  G  G  I  T  S  Y  A  D  S  V  R  G  R  F  T  I  S  G  D  S  S  K  
                    Query_12889  91   AGTGGGTCTCACTTATTTATAATGGTGGTATTACATCCTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCGGAGACAGTTCCAAGA  180
V  92.3% (228/247)  IGHV3-53*01  137  ...........G.........GC.......GC....A.................A...................A......A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------------C
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  M  Y  F  C  A  R  E  S  P  R  Y  D  F  W  
                    Query_12889  181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATGTATTTCTGTGCGAGAGAGTCGCCACGTTACGATTTTTGGA  270
V  92.3% (228/247)  IGHV3-53*01  227  ...............................................G......A............-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  92.3% (24/26)    IGHD3-3*01   4    ----------------------------------------------------------------------------..............  17

                                      DR3-IMGT----------------------------->                                  
                                      N  G  Y  Y  I  T  K  K  G  A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_12889  271  ATGGCTATTATATTACCAAAAAAGGAGCTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCCTCAG  342
D  92.3% (24/26)    IGHD3-3*01   18   G...T.......------------------------------------------------------------  29
J  95.7% (44/46)    IGHJ3*02     5    --------------------------...........................A.............T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_216602

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           338     5e-95
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	230	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_12890  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.3% (230/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_12890  91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCC  180
V  94.3% (230/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C.................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_12890  181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  94.3% (230/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12890  271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_309413

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-3*01                                                                                            14.1    8.5  
IGHJ5*01                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGCC	TGGAGTG	ACCGATTACTTCCACTCC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGCCTGGAGTGACCGATTACTTCCACTCCTTCGACTCC	ARDRPGVTDYFHSFDS	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12891  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAGCAACTTTGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ....................................C........G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  R  G  G  N  T  Y  H  A  D  S  V  K  G  R  F  I  I  S  R  D  A  S  
                    Query_12891  91   AGTGGGTCTCAGCTATTAGTGGTCGTGGTGGTAACACATACCACGCAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACGCTTCGA  180
V  93.6% (234/250)  IGHV3-23*01  137  .......................A.........G.......T......................G....C.............AA...C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  K  V  E  D  T  A  V  Y  Y  C  A  R  D  R  P  G  V  T  D  
                    Query_12891  181  AGAACACGCTCTATCTGCAAATGAACAGCCTGAAAGTCGAGGACACGGCCGTATATTATTGTGCGAGAGATAGGCCTGGAGTGACCGATT  270
V  93.6% (234/250)  IGHV3-23*01  227  ..........G......................G..C.....................C.......A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-3*01   14   ----------------------------------------------------------------------------.......-------  20

                                      T------------------>                                  
                                      Y  F  H  S  F  D  S  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_12891  271  ACTTCCACTCCTTCGACTCCTGGGGCCAGGGAACCCTGGTAAGCGTCTCCTCAG  324
J  93.0% (40/43)    IGHJ5*01     9    -----------.................A...........C.C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_116223

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           318     6e-89
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	246	1	1	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_12892  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  91.8% (223/243)  IGHV4-39*01  50   .....TCC...A....C.............G.....T.....G.....G.........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_12892  94   TGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAGTCGAGTCACCATTTCCGTAGACACGTCCA  183
V  91.8% (223/243)  IGHV4-39*01  140  ..........................A....G.G.........CA..........C.................A................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  F  Y  C  G  G  G  K  N  L  L  G  S  
                    Query_12892  184  AGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTTTTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGTT  273
V  91.8% (223/243)  IGHV4-39*01  230  ...................G....G...........................G.A........---------------------------  292
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                             
D  100.0% (6/6)     IGHD3-16*01  18   -----------------------------------------------------------------......-------------------  23

                                      ------------->                                  
                                      Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12892  274  ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (48/48)   IGHJ4*02     1    ................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_116222

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           353     1e-99
IGHD3-3*01                                                                                            25.7    0.003
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTTTCCGGGAAG	TACGATTTTGGGAGTG	CCGTAGGGGGTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTTTCCGGGAAGTACGATTTTGGGAGTGCCGTAGGGGGTCTTGACTAC	AKDLSGKYDFGSAVGGLDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  H  Y  G  V  H  W  V  R  Q  A  P  A  K  G  L  
                    Query_12893  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTCACTATGGGGTGCACTGGGTCCGCCAGGCTCCAGCCAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-30*18  47   ....................G.......................AG......CA........................G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  T  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12893  91   AGTGGGTGGCACTTATAACATACGATGGAAGTAATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (238/250)  IGHV3-30*18  137  ...........G.....T....T...................................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  L  S  G  K  Y  D  
                    Query_12893  181  AGAACACGGTGTATCTGCAAATGAACAGCCTGAGACCTGAGGACACGGCTGTATATTACTGTGCGAAAGATCTTTCCGGGAAGTACGATT  270
V  95.2% (238/250)  IGHV3-30*18  227  ........C..........................G................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD3-3*01   5    -----------------------------------------------------------------------------------.......  11

                                      -IMGT----------------------->                                  
                                      F  G  S  A  V  G  G  L  D  Y  W  G  Q  G  T  L  I  T  L  P  S  
                    Query_12893  271  TTGGGAGTGCCGTAGGGGGTCTTGACTACTGGGGCCAGGGCACCCTGATCACCCTCCCCTCAG  333
D  93.8% (15/16)    IGHD3-3*01   12   ..T......------------------------------------------------------  20
J  90.5% (38/42)    IGHJ4*02     7    ---------------------...................A......G.....G..T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_116221

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           394     7e-112
IGHD3-3*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	GGAGAGTCTG	CGATTTCTGGAGTGGTTAT	CCCCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTAC	AREESLRFLEWLSPDY	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	47	4	0	92.2
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	298	8	7	1	0	87.5
Total	N/A	N/A	296	274	22	0	92.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  L  T 
                    Query_12894  3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTAAAGGTCTCCTGCAAGGCCTCTGGTTACACCTTGACC  92
V  92.6% (274/296)  IGHV1-18*01  1    .....T...............................................G.................T..............T...  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  S  M  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  S  N  I  N  Y 
                    Query_12894  93   AGATATAGTATGTCTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATAGCAACATAAATTAT  182
V  92.6% (274/296)  IGHV1-18*01  91   ..C...G....CAGC....................................................C.......G.T....C...C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  L  L  G  R  V  T  M  T  I  D  T  S  A  N  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_12894  183  GCACAGAAACTCCTGGGCAGAGTCACCATGACCATAGACACATCCGCGAACACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  272
V  92.6% (274/296)  IGHV1-18*01  181  ........G....A....................C..........A...G........................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  E  E  S  L  R  F  L  E  W  L  S  P  D  Y  W  G  Q  G  T  L  V  I 
                    Query_12894  273  ACGGCCGTGTATTATTGTGCGAGGGAGGAGAGTCTGCGATTTCTGGAGTGGTTATCCCCCGACTACTGGGGCCAGGGAACCCTGGTCATC  362
V  92.6% (274/296)  IGHV1-18*01  271  ..............C........A..----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.7% (18/19)    IGHD3-3*01   7    ------------------------------------......T............-----------------------------------  25
J  97.1% (34/35)    IGHJ4*02     9    ------------------------------------------------------------............................C.  38

                                           
                                       V  S
                    Query_12894  363  GTCTC  367
J  97.1% (34/35)    IGHJ4*02     39   .....  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_116220

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD6-19*01                                                                                           12.2    31   
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGC	TGGCTG	ATTCCTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGCTGGCTGATTCCTTTCTACTTTGACTTC	ARAKGWLIPFYFDF	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12895  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*01  49   ........................................................C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  H  S  G  G  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12895  91   TGGATTGGCAATATCTATCACAGTGGGGGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.9% (234/244)  IGHV4-59*01  139  ........GT........T........A..............................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  E  V  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  A  K  G  W  L  I  P  F  Y 
                    Query_12895  181  CAGTTCTCCCTGGAGGTGAGCTCTGTGACCGCTGCGGACACGGCCATTTATTACTGTGCGAGAGCTAAGGGCTGGCTGATTCCTTTCTAC  270
V  95.9% (234/244)  IGHV4-59*01  229  ............A..C.............................G.G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  12   ------------------------------------------------------------------------......------------  17
J  95.7% (45/47)    IGHJ4*02     2    --------------------------------------------------------------------------------------....  5

                                      -------->                                  
                                       F  D  F  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_12895  271  TTTGACTTCTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  313
J  95.7% (45/47)    IGHJ4*02     6    .......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_116227

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           318     6e-89
IGHD2-21*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGGGGG	ATTGTGATGGT	ATTAACTGCTTCCCCTGG	TACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGGATTGTGATGGTATTAACTGCTTCCCCTGGTACTCCTATTATGGAATGCACGTC	AKGDCDGINCFPWYSYYGMHV	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	222	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  L  Y  G  G  S  F  S  G  H  Y  W  I  W  L  R  Q  S  P  G  K  G  L  E 
                    Query_12896  1    ACCCTGTCCCTCACCTGCGCTCTCTATGGTGGGTCCTTCAGTGGTCACTACTGGATTTGGCTCCGCCAGTCCCCCGGGAAGGGGCTGGAG  90
V  92.1% (222/241)  IGHV4-34*01  49   .....................G.......................T.........GC...A........C....A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  K  Y  N  S  S  L  K  S  R  V  A  M  S  I  D  T  S  K  S 
                    Query_12896  91   TGGATTGGGGAAATCAATCATAGTGGAAGCACGAAGTACAACTCGTCCCTCAAGAGTCGAGTCGCCATGTCAATAGACACGTCCAAGAGT  180
V  92.1% (222/241)  IGHV4-34*01  139  ................................C..C......C....................A....A...G...............AC  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  Y  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  G  D  C  D  G  I  N  C  F 
                    Query_12896  181  CAATTCTACCTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAAGGGGGATTGTGATGGTATTAACTGCTTC  270
V  92.1% (222/241)  IGHV4-34*01  229  ..G....C...........G...........................G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (10/11)    IGHD2-21*01  6    -------------------------------------------------------------------......G....------------  16

                                      MGT-------------------------->                                 
                                       P  W  Y  S  Y  Y  G  M  H  V  W  G  Q  G  P  T  V  F  V  S  S 
                    Query_12896  271  CCCTGGTACTCCTATTATGGAATGCACGTCTGGGGCCAAGGGCCCACGGTCTTCGTCTCCTCA  333
J  86.0% (49/57)    IGHJ6*02     6    ------....A...C..C..T...G.................A........AC..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_116226

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           339     1e-95
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	N/A	N/A	GGGGCCTGTG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGCCTGTGTACTTTGACCAC	AKGPVYFDH	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12897  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.9% (232/247)  IGHV3-23*01  47   ....................G....................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  I  G  G  G  D  I  T  Y  Y  A  D  S  V  N  G  R  F  T  I  S  R  D  N  S  
                    Query_12897  91   AGTGGGTCTCAAGTATTATTGGTGGTGGTGATATCACATACTATGCAGACTCCGTCAACGGCCGGTTCACCATCTCCAGAGACAATTCGA  180
V  93.9% (232/247)  IGHV3-23*01  137  ...........GC.....G....A......G..G.........C...........G..G.............................C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  T  L  Y  L  Q  M  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  P  V  Y  F  D  H  
                    Query_12897  181  AGAATACGCTTTATCTGCAAATGAACGGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGGGGCCTGTGTACTTTGACCACT  270
V  93.9% (232/247)  IGHV3-23*01  227  ....C.....G...............A........................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  91.3% (42/46)    IGHJ4*02     3    -----------------------------------------------------------------------------.........T...  15

                                                                       
                                      W  G  Q  G  R  L  V  T  V  S  S  
                    Query_12897  271  GGGGCCAGGGAAGGTTGGTCACCGTCTCCTCAG  303
J  91.3% (42/46)    IGHJ4*02     16   ............CCC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_116225

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70*01                                                                                           363     2e-102
IGHD3-10*01                                                                                           21.8    0.044 
IGHJ5*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCACG	AACCGGATTTTCTCGT	TATGGTTCGGG	CCTAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGAACCGGATTTTCTCGTTATGGTTCGGGCCTACACTGGTTCGACCCC	ARTGFSRYGSGLHWFDP	267	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	50	45	44	1	0	97.8
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	49	2	0	96.1
CDR2-IMGT	132	152	21	19	2	0	90.5
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	271	5	5	0	0	100
Total	N/A	N/A	266	249	17	0	93.6


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  N  T  P  E  M  C  G  S  W  I  R 
                    Query_12898  6    CTGGTGAAGCCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCAACACTCCTGAAATGTGTGGGAGCTGGATCCGT  95
V  93.6% (249/266)  IGHV2-70*01  31   ........A.................................................G....AG..G........T.............  120
                                       L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  C  V  S  W  I  R 

                                      ------FR2-IMGT---------------------><-----CDR2-IMGT-----><--------------------------------
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  E  D  D  K  Y  Y  R  T  S  L  E  T  R  L  S 
                    Query_12898  96   CAGCCCCCAGGAAAGGCCCTGGAGTGGCTTGCACTCATTGATTGGGAGGATGATAAGTACTACAGGACATCTCTGGAGACCAGGCTCAGC  185
V  93.6% (249/266)  IGHV2-70*01  121  ...........G...................................T........A........C.........A............C.  210
                                       Q  P  P  G  K  A  L  E  W  L  A  L  I  D  W  D  D  D  K  Y  Y  S  T  S  L  K  T  R  L  T 

                                      --------------------FR3-IMGT----------------------------------------------------><--------
                                       I  T  K  D  T  S  K  N  Q  V  V  L  R  M  T  D  M  E  P  A  D  T  A  T  Y  Y  C  A  R  T 
                    Query_12898  186  ATCACCAAGGACACCTCCAAAAACCAGGTGGTCCTTAGAATGACCGACATGGAGCCTGCGGACACAGCCACGTATTACTGTGCACGAACC  275
V  93.6% (249/266)  IGHV2-70*01  211  ...T.................................C.......A.......C....T...........................----  296
                                       I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R    

                                      ------------CDR3-IMGT-------------------->                                  
                                       G  F  S  R  Y  G  S  G  L  H  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12898  276  GGATTTTCTCGTTATGGTTCGGGCCTACACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  351
D  100.0% (11/11)   IGHD3-10*01  8    ------------...........-----------------------------------------------------  18
J  100.0% (48/48)   IGHJ5*02     4    ----------------------------................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_116229

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            386     1e-109
IGHD3-10*01                                                                                           14.1    8.7   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TCGGGGA	CTCCTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATCGGGGACTCCTGTTTGACTTC	ARDRGLLFDF	269	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	41	4	0	91.1
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	154	27	26	1	0	96.3
FR3-IMGT	155	268	114	107	7	0	93.9
CDR3-IMGT (germline)	269	276	8	8	0	0	100
Total	N/A	N/A	275	261	14	0	94.9


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  G  I  S  G  D  S  V  S  S  D  T  A  A  W  N  W  I  R 
                    Query_12899  2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGGCATCTCCGGGGACAGTGTCTCTAGCGACACTGCTGCTTGGAACTGGATCAGG  91
V  94.9% (261/275)  IGHV6-1*01   31   ........G...T.G......................C.........................A...G......................  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  K  S  K  W  Y  N  D  Y  A  V  S  V  K  G  R 
                    Query_12899  92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAAGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAGGGTCGA  181
V  94.9% (261/275)  IGHV6-1*01   121  ..............................................G....................................AA.....  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  I  N  S  D  T  S  K  N  Q  F  S  L  H  L  N  S  M  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_12899  182  ATAACCATCAACTCAGACACATCCAAGAACCAGTTCTCCCTGCACCTGAACTCTATGACTCCCGAGGACACGGCTGTATACTACTGTGCA  271
V  94.9% (261/275)  IGHV6-1*01   211  ............C...............................G.........G......................G..T.........  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------CDR3-IMGT--------->                                  
                                       R  D  R  G  L  L  F  D  F  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_12899  272  AGAGATCGGGGACTCCTGTTTGACTTCTGGGGCCAGGGAATCCTGGTCACCGTCTCGTCAG  332
V  94.9% (261/275)  IGHV6-1*01   301  .....--------------------------------------------------------  305
                                       R                                                           
D  100.0% (7/7)     IGHD3-10*01  14   -----.......-------------------------------------------------  20
J  93.0% (40/43)    IGHJ4*02     6    ------------------.......A..............C...............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_116228

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           297     7e-83
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GATAG	N/A	N/A	GTGCGGGATGGCAACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGATAGGTGCGGGATGGCAACCTGACTCC	VIGAGWQPDS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	43	8	0	84.3
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	5	2	0	71.4
Total	N/A	N/A	244	217	27	0	88.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  S  G  Y  Y  L  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12900  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTGAGTGGTTATTATTTGAACTGGATCCGACAGCCCCCAGGGAAGGGACTGGAA  90
V  88.9% (217/244)  IGHV4-59*01  49   ....................................A.C...A....C..C.G..G.........G.......................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  L  I  S  Y  T  G  S  T  N  Y  N  P  S  L  Q  S  R  V  I  I  S  V  D  T  S  K  N 
                    Query_12900  91   TGGCTTGGTTTAATCTCTTACACCGGGAGTACCAACTACAACCCCTCCCTCCAGAGTCGAGTCATCATATCGGTAGACACGTCCAAGAAC  180
V  88.9% (217/244)  IGHV4-59*01  139  ...A....G.AT....A.....GT.....C.....................A............C......A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  V  I  G  A  G  W  Q  P  D  S  W 
                    Query_12900  181  CAGTTCTCCCTGAGGTTGAGCTCTGTGACCGCTGCGGACACGGCCCTATATTATTGTGTGATAGGTGCGGGATGGCAACCTGACTCCTGG  270
V  88.9% (217/244)  IGHV4-59*01  229  .............A.C.............................G.G.....C....C..G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.2% (37/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  P  G  T  L  V  T  F  S  S  
                    Query_12900  271  GGCCCGGGAACGCTGGTCACCTTCTCCTCAG  301
J  90.2% (37/41)    IGHJ4*02     18   ....A......C.........G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_211598

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           361     4e-102
IGHD3-10*01                                                                                           12.2    32    
IGHJ2*01                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCCGACCCTAGTGAATCTTA	ATTATA	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCCGACCCTAGTGAATCTTAATTATAACTGGTTCTTCGATCTC	AKPTLVNLNYNWFFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	239	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12901  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACCTTGAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (239/247)  IGHV3-23*01  47   ............................T...........T.................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  D  R  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12901  91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGATAGAACATTTTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.8% (239/247)  IGHV3-23*01  137  ..............................G...C....AC.................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  T  L  V  N  L  N  
                    Query_12901  181  AGAACACGCTGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAAGCCGACCCTAGTGAATCTTAATT  270
V  96.8% (239/247)  IGHV3-23*01  227  ...................A................................A..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-10*01  24   ---------------------------------------------------------------------------------------...  26

                                      T------------------>                                  
                                      Y  N  W  F  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_12901  271  ATAACTGGTTCTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  100.0% (6/6)     IGHD3-10*01  27   ...---------------------------------------------------  29
J  98.0% (50/51)    IGHJ2*01     3    ---......A............................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_84147

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            355     3e-100
IGHD3-10*01                                                                                           10.3    116   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GA	TCGGG	ATGGCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGATCGGGATGGCTCCCTGACTAC	VGGSGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  N  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12902  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGTAACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-7*01   47   ....................................C........G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  K  D  G  S  E  R  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12902  91   AGTGGGTGGCCAACATAAAGAAAGATGGAAGTGAGAGAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (238/249)  IGHV3-7*01   137  ....................C...............A.T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  V  G  G  S  G  W  L  P  D  
                    Query_12902  181  AGAACTCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGTGGGAGGATCGGGATGGCTCCCTGACT  270
V  95.6% (238/249)  IGHV3-7*01   227  ...................A...A............C..........................C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   -----------------------------------------------------------------------.....--------------  18
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12902  271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_206286

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           347     7e-98
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AATCGAAGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAATCGAAGGTTTTGATATC	AREIEGFDI	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  H  V  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12903  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTAGTCATGTTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-21*01  47   ....................................C.........CT..AGC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  T  S  S  N  Y  R  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12903  91   AGTGGGTCTCATCCATTACTACTAGTAGTAATTACAGATACTACGCAGACTCAGTTAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-21*01  137  ..................G..G........G.....T..................G..................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  L  Y  L  Q  I  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  I  E  G  F  D  I  
                    Query_12903  181  AGAACTCACTGTATTTGCAAATCAACGGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAAATCGAAGGTTTTGATATCT  270
V  94.4% (236/250)  IGHV3-21*01  227  ..............C.......G...A...........................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (44/44)   IGHJ3*02     7    -------------------------------------------------------------------------------...........  17

                                                                       
                                      W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12903  271  GGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  303
J  100.0% (44/44)   IGHJ3*02     18   .................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_146525

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           327     9e-92
IGHD2-21*02                                                                                           12.2    32   
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGCGGG	GACTGC	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCGGGGACTGCCTACTACTACGGCATGGACGTC	ARGAGTAYYYGMDV	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	105	9	0	92.1
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  S  G  G  S  I  N  S  G  G  Y  F  W  S  W  I  R  Q  T  P  G  K  G  
                    Query_12904  4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCAACAGTGGTGGTTACTTCTGGAGCTGGATCCGGCAGACCCCAGGGAAGGGAC  93
V  92.0% (229/249)  IGHV4-61*08  50   .....TCC...A.....A.................G...G..............A...................C...............  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  M  Y  Y  S  G  S  T  D  Y  H  P  S  L  R  S  R  V  S  I  S  V  D  T  S  
                    Query_12904  94   TGGAGTGGATTGGCTATATGTATTACAGTGGGAGCACCGATTACCACCCCTCCCTCAGGAGTCGAGTCAGCATATCAGTCGACACGTCCA  183
V  92.0% (229/249)  IGHV4-61*08  140  .............G.....C..................A.C...A............A...........C.........A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  T  A  Y  Y  
                    Query_12904  184  AGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGGCGGGGACTGCCTACTACT  273
V  92.0% (229/249)  IGHV4-61*08  230  ...................G.....C...........T...............................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*02  17   ----------------------------------------------------------------------------......--------  22
J  98.2% (54/55)    IGHJ6*02     8    ----------------------------------------------------------------------------------........  15

                                      ------------->                                 
                                      Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12904  274  ACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  98.2% (54/55)    IGHJ6*02     16   ....T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_119561

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         333     1e-93
IGHD3-10*01                                                                                           16.1    2.5  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	CATGGA	GGTCCGGGGAATTA	CCAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACATGGAGGTCCGGGGAATTACCAGTTTGACTAC	ARHGGPGNYQFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	93	21	0	81.6
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	251	38	0	86.9


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  S  F  D  T  K
                    Query_12905    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAGGATCTCCTGTAAGGCTTCTGGATACAGTTTTGACACCAA  90
V  86.9% (251/289)  IGHV5-10-1*01  6    ..............................A........G.........................G............C...AC..G.T.  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  R  A  P  Y  T  H  Y  N  S
                    Query_12905    91   GTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATAGATCCCAGGGCCCCCTATACCCATTACAACTC  180
V  86.9% (251/289)  IGHV5-10-1*01  96   C.......G................................................T.....T..T.A.T.T......A.C....G.C.  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  N  V  T  L  P  V  D  R  S  T  T  T  A  Y  M  Q  G  T  S  L  E  A  S  D  S  G
                    Query_12905    181  GTCCTTCCAAGGAAACGTCACCCTCCCGGTTGACAGGTCCACCACCACTGCCTACATGCAGGGGACCAGCCTGGAGGCCTCGGACAGCGG  270
V  86.9% (251/289)  IGHV5-10-1*01  186  ............CC........A..T.A.C.....A.....T..G..........C.....T...G.......A............C..C  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------CDR3-IMGT-------------->                                  
                                          I  Y  F  C  A  R  H  G  G  P  G  N  Y  Q  F  D  Y  R  G  Q  G  T  P  V  T  F  S  S  
                    Query_12905    271  CATTTATTTCTGTGCGCGACATGGAGGTCCGGGGAATTACCAGTTTGACTACCGGGGCCAGGGAACCCCGGTCACCTTCTCCTCAG  356
V  86.9% (251/289)  IGHV5-10-1*01  276  ...G....A.......A..-------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                    
D  85.7% (12/14)    IGHD3-10*01    11   -------------------------...T......G...-----------------------------------------------  24
J  93.0% (40/43)    IGHJ4*02       6    -------------------------------------------.........T...............T.......G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_119560

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*05                                                                                         291     5e-81
IGHD3-10*01                                                                                           12.2    31   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*05	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	TGGTTC	TACGTGGCG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGTGGTTCTACGTGGCGACAACTGGTTCGACCTC	VRVVLRGDNWFDL	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  D  S  I  T  R  G  G  Y  S  W  S  W  I  R  Q  S  P  G  K  G 
                    Query_12906    1    ACCCTGTCCCTCACCTGCGCTGTGTCCGGTGACTCCATCACCAGGGGTGGTTACTCCTGGAGTTGGATCCGCCAGTCCCCAGGGAAGGGC  90
V  87.2% (218/250)  IGHV4-30-2*05  49   .......................C..T....G........G...T.................C........G...C.A............  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  A  N  I  Y  Y  S  G  K  T  N  F  N  P  S  L  K  S  R  L  T  I  S  L  D  A  S 
                    Query_12906    91   CTGGAGTGGATTGCGAACATCTATTATAGTGGGAAGACCAACTTCAATCCGTCCCTCAAGAGTCGACTTACCATATCACTAGACGCGTCC  180
V  87.2% (218/250)  IGHV4-30-2*05  139  .............G.T........C.........GC...T...A...C..................G...........G.....A.....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         E  N  Q  F  S  L  K  L  M  S  M  T  A  A  D  A  A  V  Y  Y  C  V  R  V  V  L  R  G  D  N 
                    Query_12906    181  GAGAACCAATTCTCTCTGAAACTTATGTCGATGACTGCCGCAGACGCGGCCGTTTATTACTGTGTCAGAGTGGTTCTACGTGGCGACAAC  270
V  87.2% (218/250)  IGHV4-30-2*05  229  A.......G.....C.....G..G.GC..TG..............A.......G..........C.....--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01    10   ----------------------------------------------------------------------......--------------  15
J  94.1% (48/51)    IGHJ5*02       1    -------------------------------------------------------------------------------------.....  5

                                        ----------->                                  
                                         W  F  D  L  W  G  Q  G  T  Q  F  T  V  S  S  
                    Query_12906    271  TGGTTCGACCTCTGGGGCCAGGGAACCCAGTTCACCGTCTCCTCAG  316
J  94.1% (48/51)    IGHJ5*02       6    ..........C.................T.G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_119565

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           396     2e-112
IGHD5-18*01                                                                                           16.1    2.6   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCCTTGTTGGCCTTGCA	GTGGATAC	TATTTTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCCTTGTTGGCCTTGCAGTGGATACTATTTTCTGACTAT	ARAPLLALQWILFSDY	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	17	7	0	70.8
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	274	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  S  S  I  S 
                    Query_12907  1    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTCTTCCATTAGC  90
V  92.9% (274/295)  IGHV1-18*01  1    .....T.....G...................................................................ACA..T...C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  V  A  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  T  A  Y  N  G  K  T  N  Y 
                    Query_12907  91   AGTTATGGAGTCGCCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCACCGCTTATAATGGTAAAACAAACTAT  180
V  92.9% (274/295)  IGHV1-18*01  91   ..C.....TA..AG...........................G......................G......C........C.........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_12907  181  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGAC  270
V  92.9% (274/295)  IGHV1-18*01  181  .........C........................................................C.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  I  Y  Y  C  A  R  A  P  L  L  A  L  Q  W  I  L  F  S  D  Y  W  G  Q  G  T  P  V  T 
                    Query_12907  271  ACGGCCATTTATTATTGTGCGAGAGCCCCCTTGTTGGCCTTGCAGTGGATACTATTTTCTGACTATTGGGGCCAGGGAACCCCGGTCACC  360
V  92.9% (274/295)  IGHV1-18*01  271  ......G.G.....C..........-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (8/8)     IGHD5-18*01  1    --------------------------------------------........--------------------------------------  8
J  95.1% (39/41)    IGHJ4*02     8    -----------------------------------------------------------......C................T.......  38

                                                
                                       V  S  S  
                    Query_12907  361  GTCTCCTCAG  370
J  95.1% (39/41)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_146527

Length=401
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           389     2e-110
IGHD4-17*01                                                                                           18.0    0.68  
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGG	CTACGGTGA	GTCCGAGTAGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTCTGGACGTC	ARDLATVSPSSFYYGLDV	290	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	70	4	0	94.6
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	45	6	0	88.2
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	104	10	0	91.2
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	272	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  T  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  
                    Query_12908  3    AGGTCCAGCTGGTACAGTCTGGAACTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCA  92
V  92.2% (272/295)  IGHV1-18*01  2    ....T........G.........G....G.............................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  K  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  
                    Query_12908  93   ACTATGGTATTACCTGGGTGCGGCAGGCCCCTGGACAGGGACTTAAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATG  182
V  92.2% (272/295)  IGHV1-18*01  92   G.........C.G.........A..............A..G...G.........................C......A............  181
                                      S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  Q  M  V  R  D  R  V  T  L  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  V  D  D  
                    Query_12908  183  CACAGATGGTCCGGGACAGAGTCACCTTGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGAGTTGACGACA  272
V  92.2% (272/295)  IGHV1-18*01  182  ......A.C...A..G..........A......C....................C..........C..............TC........  271
                                      A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  

                                      ----------------><----------------------CDR3-IMGT--------------------->                   
                                      T  A  V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  S  F  Y  Y  G  L  D  V  W  G  Q  G  T  T  
                    Query_12908  273  CGGCCGTGTATTACTGTGCGAGAGATCTGGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTCTGGACGTCTGGGGCCAAGGGACCACGG  362
V  92.2% (272/295)  IGHV1-18*01  272  .........................-----------------------------------------------------------------  296
                                      T  A  V  Y  Y  C  A  R                                                                    
D  100.0% (9/9)     IGHD4-17*01  4    ------------------------------.........---------------------------------------------------  12
J  98.1% (51/52)    IGHJ6*02     11   ----------------------------------------------------..........A...........................  48

                                                    
                                      V  T  V  S  S 
                    Query_12908  363  TCACCGTCTCCTCA  376
J  98.1% (51/52)    IGHJ6*02     49   ..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39236616


Query= Query_119567

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            311     4e-87
IGHD2-21*02                                                                                           14.1    8.5  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCGACCGAGGA	ACTGCTA	ACCTCTTCGAGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCGACCGAGGAACTGCTAACCTCTTCGAGAATGCTCTTAGTATC	AADRGTANLFENALSI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  R  G  H  I  T  S  S  H  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_12909  1    ACCCTGTCCCTCACCTGCGCTGTCTCTCGTGGCCACATCACCAGTAGTCACTGGTGGAACTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.9% (221/243)  IGHV4-4*02   49   ...........................G.....TC.....G.......A.........GT..............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  Q  I  Y  Q  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  K  S  R 
                    Query_12909  91   GAGTGGATTGGACAAATTTATCAGAGTGGGAGCACCAATTATAACCCGTCCCTCAGGAGTCGAGTCACCATTTCAGTGGACAAGTCCAGG  180
V  90.9% (221/243)  IGHV4-4*02   139  ...........GG....C.....T..............C..C.............A...............A.....A..........A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  L  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  A  D  R  G  T  A  N  L  F 
                    Query_12909  181  AACCTCTTCTCCCTGACGCTGACCTCTGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGGCCGACCGAGGAACTGCTAACCTCTTC  270
V  90.9% (221/243)  IGHV4-4*02   229  ....AG..........A.....G...........................G............---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD2-21*02  18   ---------------------------------------------------------------------------.......--------  24

                                      ----------------->                                  
                                       E  N  A  L  S  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12909  271  GAGAATGCTCTTAGTATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  93.8% (45/48)    IGHJ3*02     3    ----.....T..GA......................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_119566

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           416     2e-118
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	276	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_12910  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  96.5% (276/286)  IGHV5-51*03  6    ...............................A..............................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  G  P
                    Query_12910  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACGGCCC  180
V  96.5% (276/286)  IGHV5-51*03  96   ...................................................G............................G....A....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_12910  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAATACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  96.5% (276/286)  IGHV5-51*03  186  ............................................GC......................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        M  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  P  G  T  L  V  T  V  S  S 
                    Query_12910  271  CATGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCA  352
V  96.5% (276/286)  IGHV5-51*03  276  ................------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                   
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....----------------------------------------------------  12
J  97.5% (39/40)    IGHJ4*02     8    ------------------------------------------..............A.........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_172617

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           330     1e-92
IGHD6-13*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCCCCATAG	AGCAGCAGCTGG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCCATAGAGCAGCAGCTGGCCCCTTTGACAAC	ARHPHRAAAGPFDN	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  A  L  E 
                    Query_12911  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGCACTGGAG  90
V  93.1% (228/245)  IGHV4-59*08  49   ...........................................G......................................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  I  F  Y  T  G  T  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12911  91   TGGATCGGGTCTATCTTTTACACTGGGACCACCAACTACGACCCCTCTCTCAAGAGTCGAGTCACCATTTCAGTGGACACGTCCAAGAAC  180
V  93.1% (228/245)  IGHV4-59*08  139  .....T....A.....A.....G.....G..........A.......C....................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  V  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  H  P  H  R  A  A  A  G  P 
                    Query_12911  181  CAGTTCTCCCTGAGAGTGACCTCTCTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACATCCCCATAGAGCAGCAGCTGGCCCC  270
V  93.1% (228/245)  IGHV4-59*08  229  .............AGC...G....G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD6-13*01  7    --------------------------------------------------------------------------............----  18
J  93.2% (41/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       F  D  N  W  G  Q  G  T  L  V  G  V  S  S  
                    Query_12911  271  TTTGACAACTGGGGCCAGGGAACCCTGGTCGGCGTCTCCTCAG  313
J  93.2% (41/44)    IGHJ4*02     6    ......T.......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_309418

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            346     2e-97
IGHD3-10*01                                                                                           14.1    8.5  
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGATGAAG	CGGGGAG	GCCC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGATGAAGCGGGGAGGCCCCTATTATTACTACGGCATGGACGTC	ARVMKRGGPYYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  L  S  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_12912  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCCTTAGTAGTTACTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-7*03   47   ...................................A..T.......C..T.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  K  H  Y  V  D  S  V  Q  G  R  F  T  I  S  R  D  N  A  
                    Query_12912  91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGAGAAACACTATGTGGACTCTGTGCAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-7*03   137  ....................C.................T.................A.................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  I  L  Q  M  S  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  V  M  K  R  G  G  P  
                    Query_12912  181  AGAATTCACTGATTCTGCAAATGAGTAGCCTGAGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGTGATGAAGCGGGGAGGCCCCT  270
V  94.4% (235/249)  IGHV3-7*03   227  ....C......TA...........AC..........C................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-10*01  15   -----------------------------------------------------------------------------.......------  21
J  94.8% (55/58)    IGHJ6*02     5    ----------------------------------------------------------------------------------------..  6

                                      GT-------------------->                                 
                                      Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12912  271  ATTATTACTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  94.8% (55/58)    IGHJ6*02     7    .C..C........T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_172611

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           352     3e-99
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTCCGGAG	GTGGGAGCTACT	CGTGGTCCTTTTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCGGAGGTGGGAGCTACTCGTGGTCCTTTTCCTAC	ARGSGGGSYSWSFSY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  P  G  F  T  F  S  T  Y  S  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12913  1    GGTCCCTGAGACTCTCCTGTGCAGCCCCTGGATTCACCTTCAGTACCTATAGCTTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-21*01  47   ..........................T..................G.......A...A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  S  S  S  S  Y  M  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12913  91   AGTGGGTCTCATCCATTACTAGTAGTAGTAGTTACATGAACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (237/249)  IGHV3-21*01  137  ..................G..................AT...................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  S  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  G  S  G  G  G  S  Y  
                    Query_12913  181  AGAGCTCCCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTTCTGTGCGAGAGGGTCCGGAGGTGGGAGCTACT  270
V  95.2% (237/249)  IGHV3-21*01  227  ...A...A....A.......................................G....A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD1-26*01  7    ------------------------------------------------------------------------------............  18

                                      ---------------->                                  
                                      S  W  S  F  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12913  271  CGTGGTCCTTTTCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (38/38)   IGHJ4*02     11   -------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_309857

Length=412
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           427     1e-121
IGHD6-13*01                                                                                           19.9    0.19  
IGHJ6*02                                                                                              114     2e-29 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TT	CAGCAGCTGG	CAAACCGGCTAACA	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCAGCAGCTGGCAAACCGGCTAACAATTACTACTACTACTACGGTCTGGACGTC	ARHSAAGKPANNYYYYYGLDV	292	354	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	71	3	0	95.9
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	111	3	0	97.4
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	295	284	11	0	96.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_12914  5    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  94
V  96.3% (284/295)  IGHV5-51*01  2    ....G.....G.............................C.................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  L  P  G  K  G  L  E  W  M  G  F  I  Y  P  G  D  S  H  T  K  Y  
                    Query_12914  95   GTTACTGGATCGGCTGGGTGCGCCAGCTGCCCGGGAAAGGCCTGGAGTGGATGGGATTCATCTATCCTGGTGACTCTCATACCAAATACA  184
V  96.3% (284/295)  IGHV5-51*01  92   .C........................A............................GA....................G......G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  
                    Query_12914  185  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACA  274
V  96.3% (284/295)  IGHV5-51*01  182  ...........C...........................................................A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------------------CDR3-IMGT-------------------------->          
                                      T  A  M  Y  Y  C  A  R  H  S  A  A  G  K  P  A  N  N  Y  Y  Y  Y  Y  G  L  D  V  W  G  Q  
                    Query_12914  275  CCGCCATGTATTACTGTGCGAGACATTCAGCAGCTGGCAAACCGGCTAACAATTACTACTACTACTACGGTCTGGACGTCTGGGGCCAAG  364
V  96.3% (284/295)  IGHV5-51*01  272  .........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-13*01  9    ---------------------------..........-----------------------------------------------------  18
J  98.4% (61/62)    IGHJ6*02     1    ---------------------------------------------------....................A..................  39

                                                             
                                      G  T  T  V  T  V  S  S 
                    Query_12914  365  GGACCACGGTCACCGTCTCCTCA  387
J  98.4% (61/62)    IGHJ6*02     40   .......................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40393728


Query= Query_309854

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           280     1e-77
IGHD1-7*01                                                                                            14.1    8.1  
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD1-7*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACGA	AAACTTTCGCGACATAT	GAACTAC	N/A	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAAAACTTTCGCGACATATGAACTACGTATGGACGTC	TKTFATYELRMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	97	17	0	85.1
CDR3-IMGT (germline)	238	241	4	3	1	0	75
Total	N/A	N/A	241	210	31	0	87.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  G  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_12915  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTGGTTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGGCTGGAG  90
V  87.1% (210/241)  IGHV4-34*01  49   ..................G......A......G...T.C.......A..................C...C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  Y  H  N  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  M  S  M  A  K  L  K  N 
                    Query_12915  91   TGGATTGGCGAAATCTATCATAATGGCAACACCAACTACAACCCGTCCCTCCAGAGTCGGGTCACCATGTCAATGGCCAAGTTGAAGAAT  180
V  87.1% (210/241)  IGHV4-34*01  139  ........G......A......G...A.G......................A.......A........A...G.A.A..C..CC.....C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  F  L  K  L  N  D  V  T  A  A  D  T  A  V  Y  Y  C  T  K  T  F  A  T  Y  E  L  R  M 
                    Query_12915  181  CAGTTCTTCCTGAAACTGAACGATGTGACCGCCGCGGACACGGCCGTCTATTACTGTACGAAAACTTTCGCGACATATGAACTACGTATG  270
V  87.1% (210/241)  IGHV4-34*01  229  .......C......G....G.TC.....................T..G.........G...-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (7/7)     IGHD1-7*01   11   ------------------------------------------------------------------------------.......-----  17
J  97.7% (43/44)    IGHJ6*02     19   -------------------------------------------------------------------------------------.....  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_12915  271  GACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  309
J  97.7% (43/44)    IGHJ6*02     24   ............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_309852

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           325     3e-91
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGTAGGGG	CGGTGACTAC	GGGGCGGG	CTTAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCGTAGGGGCGGTGACTACGGGGCGGGCTTAGAGTAC	ARDRRGGDYGAGLEY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	10	1	0	90.9
CDR1-IMGT	27	50	24	20	4	0	83.3
FR2-IMGT	51	101	51	51	0	0	100
CDR2-IMGT	102	125	24	24	0	0	100
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	232	220	12	0	94.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  A  L  S  T  S  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  
                    Query_12916  16   GTACAGCGTCTGGATTCGCCTTAAGTACCTCTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATAT  105
V  94.8% (220/232)  IGHV3-33*01  65   ..G..............A....C....G..A...........................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  E  S  K  N  T  L  H  L  
                    Query_12916  106  GGTATGATGGAAGTAATAAATACTATGCAGATTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGAATCCAAGAACACGCTGCATCTGC  195
V  94.8% (220/232)  IGHV3-33*01  155  ...............................C.................................A.T...............T......  244
                                      W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  R  R  G  G  D  Y  G  A  G  L  E  Y  
                    Query_12916  196  AGATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGACCGTAGGGGCGGTGACTACGGGGCGGGCTTAGAGTACT  285
V  94.8% (220/232)  IGHV3-33*01  245  .A....................G...........G.................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (10/10)   IGHD4-17*01  7    -------------------------------------------------------------..........-------------------  16
J  95.5% (42/44)    IGHJ4*02     5    -------------------------------------------------------------------------------...T..C....  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12916  286  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  95.5% (42/44)    IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_309853

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           427     9e-122
IGHD1-26*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCG	AGTGGGAGCTACT	TGGGGCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTAC	ARDLEWELLGAFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	282	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  R  Y
                    Query_12917  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGATA  90
V  96.9% (282/291)  IGHV1-69*06  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  S  F  G  T  A  H  Y  A  Q
                    Query_12917  91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTAGCTTTGGAACAGCACACTACGCACA  180
V  96.9% (282/291)  IGHV1-69*06  96   .................................................................T......T......A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  R  S  T  S  T  A  Y  M  E  L  S  S  L  S  S  E  D  T  A
                    Query_12917  181  GAGATTCCAGGGCAGAGTCACGATTACCGCGGACAGATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGCTCTGAGGACACGGC  270
V  96.9% (282/291)  IGHV1-69*06  186  ..AG...............................A.......................................A..............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  D  L  E  W  E  L  L  G  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12917  271  CGTGTATTACTGTGCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  96.9% (282/291)  IGHV1-69*06  276  .....................--------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                       
D  100.0% (13/13)   IGHD1-26*01  6    --------------------------.............--------------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     6    ----------------------------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_309851

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           160     1e-41
IGHD3-10*01                                                                                           14.1    8.8  
IGHJ4*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CTGGCCGCCTCATTTGACGGAATTGACACTGGCTTCTA	TTCGGGG	CCCCCT	TTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGAGGCTGGCCGCCTCATTTGACGGAATTGACACTGGCTTCTATTCGGGGCCCCCTTTTGGCAAC	ERLAASFDGIDTGFYSGPPFGN	235	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	18	8	0	69.2
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	99	51	35	11	5	68.6
CDR2-IMGT	100	120	21	14	7	0	66.7
FR3-IMGT	121	234	114	83	31	0	72.8
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	244	175	64	5	71.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  S  M  G  S  F  S  T  Y  C  C  N  W  I  R  K  P  P  G  K  G  L  N  
                    Query_12918  4    CCCTGAGACTCTCCTGTGCCGTCTCCATGGGGTCCTTCAGTACTTACTGCTGTAACTGGATCCGCAAGCCCCCGGGCAAGGGCCTGAA--  91
V  71.7% (175/244)  IGHV4-34*01  50   .....TCC...A....C..T....ATGGT............GG.....A...G.G..........C.......A..G.....G...G.GT  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                           C  R  H  E  E  D  W  Q  H  R  R  Q  S  V  P  P  E  S  Y  Q  H  F  T  G  R  D  Q  A  S
                    Query_12918  92   ---TTGTCGTCATGAAGAAGACTGGCAGCACAGGCGACAATCCGTCCCTCCAGAGTCGTATCAGCATTTCACAGGACGCGACCAAGCCTC  178
V  71.7% (175/244)  IGHV4-34*01  140  GGA...GG.AA..C..TC.T.G...A.....CAA.T....C.........A.......AG...C...A...GTA...A..T.....AAC.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------------CDR3
                                        C  L  P  E  A  D  F  A  D  R  R  G  Q  G  H  P  L  M  F  E  R  L  A  A  S  F  D  G  I  D
                    Query_12918  179  ATGCCTCCCTGAAGCTGATTTCGCTGACCGCCGCGGACAGGGCCATCCATTGATGTTCGAGAGGCTGGCCGCCTCATTTGACGGAATTGA  268
V  71.7% (175/244)  IGHV4-34*01  230  .GTT..............GC..TG...............C...TG.GT...AC...G.......--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                          

                                      -IMGT---------------------------->                             
                                        T  G  F  Y  S  G  P  P  F  G  N  W  G  Q  G  P  L  L  T  V  S
                    Query_12918  269  CACTGGCTTCTATTCGGGGCCCCCTTTTGGCAACTGGGGCCAGGGACCCCTGCTCACCGTCTC  331
D  100.0% (7/7)     IGHD3-10*01  13   ------------.......--------------------------------------------  19
J  89.5% (34/38)    IGHJ4*02     6    -------------------------....A.T..............A.....G..........  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_172613

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           397     8e-113
IGHD3-22*01                                                                                           33.4    2e-05 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCGGATC	ACTATGATAGTAGTGGT	C	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCGGATCACTATGATAGTAGTGGTCACTACTACTACAATATGGACGTC	ARVPDHYDSSGHYYYNMDV	280	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	66	66	65	1	0	98.5
CDR1-IMGT	67	90	24	22	2	0	91.7
FR2-IMGT	91	141	51	49	2	0	96.1
CDR2-IMGT	142	165	24	20	4	0	83.3
FR3-IMGT	166	279	114	107	7	0	93.9
CDR3-IMGT (germline)	280	286	7	7	0	0	100
Total	N/A	N/A	286	270	16	0	94.4


Alignments

                                      <----------------------------FR1-IMGT----------------------------><-------CDR1-IMGT------>
                                       L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  V  S  S  Y  G 
                    Query_12919  1    CTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCGTCAGCAGCTATGGT  90
V  94.4% (270/286)  IGHV1-69*01  10   ..............G............................................................T............C.  99
                                       L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y  A 

                                      <--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------------
                                       I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  I  L  M  F  D  T  P  N  Y  A  Q  N 
                    Query_12919  91   ATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTGGAGTGGATGGGAGTGATCATCCTTATGTTTGATACACCAAACTACGCACAGAAC  180
V  94.4% (270/286)  IGHV1-69*01  100  ...................................T.............G........C...C....G....G................G  189
                                       I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q  K 

                                      --------------------------------------FR3-IMGT--------------------------------------------
                                       F  Q  G  R  V  T  I  T  A  D  E  S  T  N  T  A  Y  M  E  L  S  N  L  R  S  E  D  T  A  V 
                    Query_12919  181  TTCCAGGGCAGAGTCACGATTACCGCGGACGAATCGACGAACACAGCCTACATGGAGTTGAGCAACCTGAGATCTGAGGACACGGCCGTT  270
V  94.4% (270/286)  IGHV1-69*01  190  ...................................C....G................C......G........................G  279
                                       F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A  V 

                                      --------><-----------------------CDR3-IMGT----------------------->                        
                                       Y  F  C  A  R  V  P  D  H  Y  D  S  S  G  H  Y  Y  Y  N  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_12919  271  TATTTCTGTGCGAGAGTTCCGGATCACTATGATAGTAGTGGTCACTACTACTACAATATGGACGTCTGGGGCCAAGGGACCACGGTCACC  360
V  94.4% (270/286)  IGHV1-69*01  280  ....A...........--------------------------------------------------------------------------  295
                                       Y  Y  C  A  R                                                                            
D  100.0% (17/17)   IGHD3-22*01  6    -------------------------.................------------------------------------------------  22
J  96.4% (54/56)    IGHJ6*02     7    -------------------------------------------...........GG..................................  53

                                               
                                       V  S  S 
                    Query_12919  361  GTCTCCTCA  369
J  96.4% (54/56)    IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_252417

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            308     4e-86
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGG	GTGGCTGG	ACATC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGGGGTGGCTGGACATCTGACTCC	TRGGGWTSDS	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	223	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  D  N  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12920  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCATGTTTGATAACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.6% (223/249)  IGHV3-7*01   47   ...............................A....CC...AG..G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  N  Q  D  G  S  E  E  H  Y  V  D  S  V  K  G  R  F  T  I  S  T  D  N  A  
                    Query_12920  91   AGTGGGTGGCCATCATCAACCAGGATGGAAGTGAGGAACACTATGTGGACTCAGTGAAGGGCCGATTCACCATCTCCACAGACAACGCCA  180
V  89.6% (223/249)  IGHV3-7*01   137  ............A...A..G..A............A..T.............T.........................G...........  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  F  L  Q  M  N  G  L  G  I  E  D  T  A  V  Y  Y  C  T  R  G  G  G  W  T  S  D  
                    Query_12920  181  AGAACACACTGTTTCTACAAATGAATGGCCTGGGAATCGAGGACACGGCTGTATATTATTGTACGAGAGGGGGTGGCTGGACATCTGACT  270
V  89.6% (223/249)  IGHV3-7*01   227  .....T......A...G........CA.....A..GC...............G.....C...G......---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  11   ------------------------------------------------------------------------........----------  18
J  97.3% (36/37)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                              
                                      S  W  G  Q  G  T  L  V  T  V  S 
                    Query_12920  271  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCC  302
J  97.3% (36/37)    IGHJ4*02     13   A...............................  44


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_309858

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           291     5e-81
IGHD3-10*01                                                                                           25.7    0.003
IGHJ3*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCACTTCGGCCC	ATGGTTCGGGGAG	CAGGGGTT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCACTTCGGCCCATGGTTCGGGGAGCAGGGGTTTTTTGATGCC	AKDHFGPWFGEQGFFDA	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  A  S  Y  D  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_12921  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTGCCAGCTATGACATGAACTGGGTCCGCCAGGCGCCAGGGAGGGGGCTGG  90
V  87.2% (218/250)  IGHV3-23*01  47   ....................................C....AG........C.....G...............T.......A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  A  R  G  G  T  K  S  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  S  
                    Query_12921  91   AGTGGGTCTCCGGTATTAGTGCTAGAGGTGGAACGAAATCATATGCGGACTCTGTGACGGGCCGCTTCACCATCTCCAGAGACAACTCCA  180
V  87.2% (218/250)  IGHV3-23*01  137  ..........A.C........G...T.....T.GC.C..AC..C..A.....C....A......G....................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  E  V  Y  L  Q  M  N  S  L  R  H  E  D  T  A  V  Y  Y  C  A  K  D  H  F  G  P  W  F  
                    Query_12921  181  AGAATGAGGTGTACTTGCAAATGAACAGCCTGAGACACGAAGACACGGCCGTATATTACTGTGCGAAAGACCACTTCGGCCCATGGTTCG  270
V  87.2% (218/250)  IGHV3-23*01  227  ....CAC.C....TC....................GC...G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (13/13)   IGHD3-10*01  9    ----------------------------------------------------------------------------------........  16

                                      GT-------------------->                                  
                                      G  E  Q  G  F  F  D  A  W  G  Q  G  T  K  V  I  V  S  S  
                    Query_12921  271  GGGAGCAGGGGTTTTTTGATGCCTGGGGCCAAGGGACAAAGGTCATCGTCTCTTCAG  327
D  100.0% (13/13)   IGHD3-10*01  17   .....----------------------------------------------------  21
J  93.2% (41/44)    IGHJ3*01     7    -------------........T.................T.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_309859

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           422     3e-120
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	ARHGDDTGGYLYYLYGMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	70	1	0	98.6
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	23	1	0	95.8
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	292	281	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  
                    Query_12922  7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACT  96
V  96.2% (281/292)  IGHV5-51*01  5    .....................................C.........................................C.......G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      F  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  N  
                    Query_12922  97   TCTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATGCCAGATACAACC  186
V  96.2% (281/292)  IGHV5-51*01  95   A...................................................G........................A.........G..  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  E  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  
                    Query_12922  187  CGTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCG  276
V  96.2% (281/292)  IGHV5-51*01  185  ........C.....................C...........................................A...............  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------------CDR3-IMGT----------------------->                   
                                      A  I  Y  Y  C  A  R  H  G  D  D  T  G  G  Y  L  Y  Y  L  Y  G  M  D  V  W  G  Q  G  T  T  
                    Query_12922  277  CCATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGG  366
V  96.2% (281/292)  IGHV5-51*01  275  ....G.................--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  85.7% (12/14)    IGHD1-26*01  4    ------------------------------...G....A.....----------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    -----------------------------------------------......TA...................................  48

                                                    
                                      V  T  V  S  S 
                    Query_12922  367  TCACCGTCTCGTCA  380
J  94.7% (54/57)    IGHJ6*02     49   ..........C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_121748

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           352     3e-99
IGHD1-26*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GAG	GTGGGAG	T	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGAGGTGGGAGTTACTACTACGCCATGGACGTC	ARGGGSYYYAMDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  H  W  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_12923  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAGTCATTGGATGCACTGGGTCCGCCAAGCTCCAGGGAGGGGGCTGG  90
V  95.2% (237/249)  IGHV3-74*01  47   ...........................................T..CT.C...............................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  H  T  D  G  S  S  T  S  Y  V  D  S  V  K  G  R  F  T  V  S  R  D  N  G  
                    Query_12923  91   TGTGGGTCTCACGTATTCACACTGATGGGAGTAGCACAAGCTATGTGGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGGCA  180
V  95.2% (237/249)  IGHV3-74*01  137  .................A.T.G.....................C.C.........................A...............C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  G  S  Y  Y  Y  
                    Query_12923  181  AGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGGAGGTGGGAGTTACTACTACG  270
V  95.2% (237/249)  IGHV3-74*01  227  .....................................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  7    ------------------------------------------------------------------------.......-----------  13
J  96.3% (52/54)    IGHJ6*02     9    --------------------------------------------------------------------------------..........  18

                                      ---------->                                 
                                      A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12923  271  CCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  96.3% (52/54)    IGHJ6*02     19   GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_121749

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           378     3e-107
IGHD1-1*01                                                                                            14.1    9.2   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GGGAGGGGG	CAACTGG	GAACCCTTTAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTAC	ARGGGNWEPFTY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	288	265	23	0	92


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  H
                    Query_12924  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCCA  90
V  92.0% (265/288)  IGHV5-51*01  6    .................................................................G............C......AG.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  L  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  I  V  F  P  D  D  S  D  T  R  Y  S  P
                    Query_12924  91   CTGGCTCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGATCGTTTTTCCTGATGACTCTGATACCAGATACAGCCC  180
V  92.0% (265/288)  IGHV5-51*01  96   ....A.............C..G.........A..........G............A.C.A.....G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  I  T  I  S  A  D  K  S  I  T  T  A  F  L  Q  W  N  S  L  K  A  S  D  P  A
                    Query_12924  181  GTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCACCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACCCCGC  270
V  92.0% (265/288)  IGHV5-51*01  186  .......C.......GG...........................G........A...........G...................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  G  N  W  E  P  F  T  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12924  271  CATCTATTACTGTGCAAGGGGAGGGGGCAACTGGGAACCCTTTACCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.0% (265/288)  IGHV5-51*01  276  ...G...........G..-----------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------.......-------------------------------------------------  11
J  100.0% (38/38)   IGHJ4*02     11   ---------------------------------------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_121742

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           352     3e-99
IGHD6-19*01                                                                                           25.7    0.003
IGHJ3*01                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGGAGAGGGGGGATATTA	CAGTGGCTGGTAC	TTAGGCCCGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGAGAGGGGGGATATTACAGTGGCTGGTACTTAGGCCCGAATGCTTATGATTTC	AKGEGGYYSGWYLGPNAYDF	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	236	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  P  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12925  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCGACTATCCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.5% (236/247)  IGHV3-23*01  47   ............................................AG....G.......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  C  V  S  V  I  S  G  S  G  D  S  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12925  91   AGTGTGTCTCCGTTATTAGTGGTAGTGGTGACAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.5% (236/247)  IGHV3-23*01  137  ....G.....A.C.................GT......T...................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  G  E  G  G  Y  Y  S  
                    Query_12925  181  AGAACACGCTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAAGGGAGAGGGGGGATATTACAGTG  270
V  95.5% (236/247)  IGHV3-23*01  227  ............A............................................A.........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (13/13)   IGHD6-19*01  9    -------------------------------------------------------------------------------------.....  13

                                      R3-IMGT------------------------>                                  
                                      G  W  Y  L  G  P  N  A  Y  D  F  W  G  Q  G  T  M  V  S  V  S  S  
                    Query_12925  271  GCTGGTACTTAGGCCCGAATGCTTATGATTTCTGGGGCCAAGGGACAATGGTCTCCGTCTCTTCAG  336
D  100.0% (13/13)   IGHD6-19*01  14   ........----------------------------------------------------------  21
J  93.8% (45/48)    IGHJ3*01     3    ------------------......T....G.......................A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_121743

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           431     4e-123
IGHD3-22*01                                                                                           37.2    1e-06 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGGGTCGC	GATAGTAGTGGTTATTACT	GG	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGTCGCGATAGTAGTGGTTATTACTGGGGTATGGACGTC	ARRGRDSSGYYWGMDV	290	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	73	1	0	98.6
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	111	3	0	97.4
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	294	285	9	0	96.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  E  G  S  G  Y  S  F  T  
                    Query_12926  3    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTGAGGGTTCTGGATACAGCTTTACCA  92
V  96.9% (285/294)  IGHV5-51*01  2    .................................................................A........................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  L  G  D  S  E  T  R  Y  
                    Query_12926  93   ACTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATTATCTATCTTGGTGACTCTGAAACCAGATACA  182
V  96.9% (285/294)  IGHV5-51*01  92   G...........G.............................................C.......C............T..........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  G  D  N  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_12926  183  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGGCGACAACTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  272
V  96.9% (285/294)  IGHV5-51*01  182  .................................C......G.................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      T  A  I  Y  Y  C  A  R  R  G  R  D  S  S  G  Y  Y  W  G  M  D  V  W  G  Q  G  T  T  V  T  
                    Query_12926  273  CCGCCATCTATTACTGTGCGAGACGGGGTCGCGATAGTAGTGGTTATTACTGGGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCG  362
V  96.9% (285/294)  IGHV5-51*01  272  .......G................------------------------------------------------------------------  295
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (19/19)   IGHD3-22*01  11   --------------------------------...................---------------------------------------  29
J  100.0% (45/45)   IGHJ6*02     18   -----------------------------------------------------.....................................  54

                                              
                                      V  S  S 
                    Query_12926  363  TCTCCTCA  370
J  100.0% (45/45)   IGHJ6*02     55   ........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_121740

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           294     6e-82
IGHD6-13*01                                                                                           21.8    0.039
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	226	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	39	30	11	1	18	36.7
FR2-IMGT	40	90	51	50	1	0	98
CDR2-IMGT	91	111	21	20	1	0	95.2
FR3-IMGT	112	225	114	107	7	0	93.9
CDR3-IMGT (germline)	226	232	7	7	0	0	100
Total	N/A	N/A	250	221	11	18	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  L  S  G  G                    F  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_12927  1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGG------------------TTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  72
V  88.4% (221/250)  IGHV4-31*03  49   .....................G..........CTCCATCAGCAGTGGTGG..A........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_12927  73   CTGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCT  162
V  88.4% (221/250)  IGHV4-31*03  139  .....................T..................A.................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V 
                    Query_12927  163  AAGAACCAATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTA  252
V  88.4% (221/250)  IGHV4-31*03  229  ........G..........A.....GC...............................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD6-13*01  11   ------------------------------------------------------------------------...........-------  21

                                      ----------------->                                  
                                       G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12927  253  GGCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  304
J  98.0% (48/49)    IGHJ3*01     2    ---.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_121746

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           321     6e-90
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_12928  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_12928  91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_12928  181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.8% (225/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_12928  271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_121744

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           316     2e-88
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCGCCGGGACG	GTGGTAATTAC	CCTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCGCCGGGACGGTGGTAATTACCCTATTGACTAC	ARPRRDGGNYPIDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  R  T  D  G  Y  Y  W  S  W  I  R  Q  F  P  G  K  G  
                    Query_12929  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGAACTGATGGTTACTACTGGAGCTGGATCCGCCAGTTCCCAGGGAAGGGCC  93
V  90.7% (225/248)  IGHV4-31*03  50   .....TCC...A............................C.G..G............................CA..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  F  I  Y  H  T  G  S  T  Y  Y  T  P  S  V  R  G  R  V  T  M  S  V  D  T  S  
                    Query_12929  94   TGGAGTGGATTGGGTTCATCTATCACACTGGGAGCACCTACTACACCCCGTCCGTCCGGGGTCGAGTCACCATGTCAGTGGACACGTCTA  183
V  90.7% (225/248)  IGHV4-31*03  140  ...............A.......T...G.................A.......C..AA.A.......T.....A.....A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  R  R  D  G  G  N  
                    Query_12929  184  AGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGACCTCGCCGGGACGGTGGTAATT  273
V  90.7% (225/248)  IGHV4-31*03  230  ..................A.....G...........................G...............----------------------  297
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD3-22*01  18   ---------------------------------------------------------------------------------.....T...  26

                                      ------------->                                  
                                      Y  P  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12929  274  ACCCTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  90.9% (10/11)    IGHD3-22*01  27   ..----------------------------------------------  28
J  100.0% (42/42)   IGHJ4*02     7    ------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_129174

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           333     1e-93
IGHD2-15*01                                                                                           12.2    30   
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGCAAG	GCTGCT	GCCCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGCAAGGCTGCTGCCCGAC	ARVARLLPD	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  T  D  Y  Y  M  N  W  I  R  Q  A  P  G  R  G  L  
                    Query_12930  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTCACTGACTACTACATGAACTGGATCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  92.8% (231/249)  IGHV3-11*01  47   .....................C....................G..............G.......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  I  S  Y  I  S  Q  S  G  S  V  V  E  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  T  
                    Query_12930  91   AGTATATTTCATACATTAGTCAGAGTGGTAGTGTCGTAGAGTACGCGGACTCTGTGAAGGGCCGATTCTCCATCTCCAGGGACAACACCA  180
V  92.8% (231/249)  IGHV3-11*01  137  ...GGG..............AGT.........AC.A..T.C.....A.....................A.................G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  A  R  L  L  P  D  
                    Query_12930  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGTGGCAAGGCTGCTGCCCGACT  270
V  92.8% (231/249)  IGHV3-11*01  227  .....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-15*01  21   ----------------------------------------------------------------------------......--------  26
J  97.2% (35/36)    IGHJ4*02     13   ---------------------------------------------------------------------------------------...  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12930  271  GGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  303
J  97.2% (35/36)    IGHJ4*02     16   ............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_129176

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            347     7e-98
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTCAGATGGCGATTTTG	GCACTGGCTGGTAC	GGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACTCAGATGGCGATTTTGGCACTGGCTGGTACGGGGGTTTTGACGAC	AKDSDGDFGTGWYGGFDD	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  E  H  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12931  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCGAAGAGCATGCCATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGCCTGG  90
V  94.4% (236/250)  IGHV3-9*01   47   ........................................T..T..TT...................G......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  T  I  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12931  91   AGTGGGTCTCAGGTATTAGTTGGAATAGCGGAACCATAAAGTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-9*01   137  ............................T..T.G....GGC.................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  K  D  S  D  G  D  F  G  
                    Query_12931  181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGAGACCTGAGGACACGGCCTTATATTACTGTGCAAAAGACTCAGATGGCGATTTTGGCA  270
V  94.4% (236/250)  IGHV3-9*01   227  ..........G........................G................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD6-19*01  8    ---------------------------------------------------------------------------------------...  10

                                      IMGT--------------------->                                  
                                      T  G  W  Y  G  G  F  D  D  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_12931  271  CTGGCTGGTACGGGGGTTTTGACGACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  330
D  92.9% (13/14)    IGHD6-19*01  11   G..........-------------------------------------------------  21
J  95.3% (41/43)    IGHJ4*02     6    -----------------......T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_129171

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           335     4e-94
IGHD4-17*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	GACTACGGTGACTAC	GGGGCCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGACTACGGTGACTACGGGGCCCCTTGACTAC	ARGTTVTTGPLDY	239	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	20	4	0	83.3
FR3-IMGT	125	238	114	111	3	0	97.4
CDR3-IMGT (germline)	239	245	7	7	0	0	100
Total	N/A	N/A	232	223	9	0	96.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  V  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  F  I 
                    Query_12932  14   TGTGCAGCCTCTGGATTCACCGTCAGTGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCATTCATT  103
V  96.1% (223/232)  IGHV3-11*06  64   .....................T...............................................................A....  153
                                       C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  T  G  D  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  S  A  K  N  S  L  S  L 
                    Query_12932  104  AGTAGTACTGGTGATTACACAAACTACGCAGACTCTGTGAAGGGCCGGTTCACCATCTCCAGAGACAGCGCCAAGAACTCACTGTCTCTG  193
V  96.1% (223/232)  IGHV3-11*06  154  .......G.A..AG.................................A...................A.................A....  243
                                       S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><--------------CDR3-IMGT-------------->      
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  T  T  V  T  T  G  P  L  D  Y  W  G 
                    Query_12932  194  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGGGACTACGGTGACTACGGGGCCCCTTGACTACTGGGGC  283
V  96.1% (223/232)  IGHV3-11*06  244  ....................................................--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (15/15)   IGHD4-17*01  2    -----------------------------------------------------...............----------------------  16
J  100.0% (40/40)   IGHJ4*02     7    ----------------------------------------------------------------------------..............  20

                                                                
                                       Q  G  T  L  V  T  V  S  S
                    Query_12932  284  CAGGGAACCCTGGTCACCGTCTCCTC  309
J  100.0% (40/40)   IGHJ4*02     21   ..........................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_252413

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           357     1e-100
IGHD4-4*01                                                                                            16.1    2.2   
IGHJ3*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-4*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGGAAGACA	GACTACAG	C	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGGAAGACAGACTACAGCGATGCTTTTGATATG	AWKTDYSDAFDM	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	237	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  H  Q  H  P  G  K  G 
                    Query_12933  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCACCAGCACCCAGGGAAGGGC  90
V  96.3% (237/246)  IGHV4-31*03  49   ......................................................................G...................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  Y  T  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  M  S 
                    Query_12933  91   CTGGAGTGGATTGGCTACATCTCTTACACTGGGAGAACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACATGTCT  180
V  96.3% (237/246)  IGHV4-31*03  139  ..............G.......A.....G......C.................................................C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  W  K  T  D  Y  S  D  A 
                    Query_12933  181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACGGCCGCGGACACGGCCGTCTATTACTGTGCGTGGAAGACAGACTACAGCGATGCT  270
V  96.3% (237/246)  IGHV4-31*03  229  ...................A...............T.................G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (8/8)     IGHD4-4*01   2    ---------------------------------------------------------------------------........-------  9
J  98.0% (48/49)    IGHJ3*02     2    ------------------------------------------------------------------------------------......  7

                                      -------->                                  
                                       F  D  M  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12933  271  TTTGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  313
J  98.0% (48/49)    IGHJ3*02     8    ........C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_129173

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           364     5e-103
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	113	1	0	99.1
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_12934  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  96.8% (241/249)  IGHV4-31*02  50   .....TCC...A....................................G.........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  
                    Query_12934  94   TGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCTA  183
V  96.8% (241/249)  IGHV4-31*02  140  ..............T......A...........................................G........................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A  
                    Query_12934  184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCAA  273
V  96.8% (241/249)  IGHV4-31*02  230  .....................................................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD2-21*02  5    ----------------------------------------------------------------------..........G.......--  22

                                      ------------->                                  
                                      N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12934  274  ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (48/48)   IGHJ4*02     1    ................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_129172

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           343     2e-96
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACCGCGAAAGTGG	GGAGTGGT	C	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACCGCGAAAGTGGGGAGTGGTCTTGATATC	ARDTAKVGSGLDI	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  A  V  S  S  S  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_12935  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCGCCGTCAGCAGCAGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  93.6% (235/251)  IGHV4-61*01  49   .................................T..........TG...G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_12935  91   CTGGAATGGATTGGGTATATCTACTACGGTGGAGACACCAAGTACAACCCCTCCCTCAAGAGTCGCGTCACCATATCATTAGACACGTCC  180
V  93.6% (235/251)  IGHV4-61*01  139  .....G.................T...A....GAG......C.......................A............G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  S  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  D  T  A  K  V  G  S 
                    Query_12935  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGGCCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATACCGCGAAAGTGGGGAGT  270
V  93.6% (235/251)  IGHV4-61*01  229  .................................A...................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-3*01   15   -------------------------------------------------------------------------------------.....  19

                                      ----------->                                  
                                       G  L  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_12935  271  GGTCTTGATATCTGGGGCCAAGGGACAATGGTCATCGTCTCTTCAG  316
D  100.0% (8/8)     IGHD3-3*01   20   ...-------------------------------------------  22
J  97.6% (41/42)    IGHJ3*02     9    ----..............................C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_252412

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD6-6*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	T	GTATAGGAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTAC	ARCIGARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  F
                    Query_12936  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTT  90
V  98.3% (284/289)  IGHV5-51*03  6    ..............................................................................C.......G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_12936  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ...................................................G............................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12936  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  C  I  G  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12936  271  CATGTATTACTGTGCGAGATGTATAGGAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  98.3% (284/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  93.8% (15/16)    IGHD6-6*01   3    --------------------......C.........-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_129179

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           339     2e-95
IGHD1-20*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAGAATACAA	GTATAAC	GGAATA	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAGAATACAAGTATAACGGAATAGGTATGGACGTC	TRSEYKYNGIGMDV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12937  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTAAGTAATAATTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (231/245)  IGHV3-53*01  47   ........................................C....GC..C.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_12937  91   AGTGGGTCTCAGTTATTTATAGTGGTGGTACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGA  180
V  94.3% (231/245)  IGHV3-53*01  137  ......................C.......G..............................A............................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      T  T  L  Y  L  Q  M  N  S  L  R  A  E  D  S  A  V  Y  Y  C  T  R  S  E  Y  K  Y  N  G  I  
                    Query_12937  181  CCACACTGTATCTTCAAATGAACAGTTTGAGAGCCGAGGACTCGGCCGTGTATTACTGTACGAGATCAGAATACAAGTATAACGGAATAG  270
V  94.3% (231/245)  IGHV3-53*01  227  A...G....................CC..............A.................G.....-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (7/7)     IGHD1-20*01  2    ----------------------------------------------------------------------------.......-------  8
J  100.0% (45/45)   IGHJ6*02     18   -----------------------------------------------------------------------------------------.  18

                                      ---------->                                 
                                      G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12937  271  GTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (45/45)   IGHJ6*02     19   ............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_129178

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            325     3e-91
IGHJ4*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	N/A	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	N/A	N/A	AGGCAATTGAACCCCAAAAT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAAGGCAATTGAACCCCAAAATCTTTGACTAC	VRRQLNPKIFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  S  R  H  I  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12938  1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCACCTTCAGTAGGCATATCATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (228/248)  IGHV3-7*03   47   .......................G................T.....CT..TGG...AG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  M  R  Q  D  G  R  E  I  Y  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_12938  91   AGTGGGTGGCCAACATGCGACAAGATGGGCGTGAGATATACTATGTGGACTCTGTGAGGGGCCGATTCACTATCTCCAGAGACAACGCCA  180
V  91.9% (228/248)  IGHV3-7*03   137  ................AAAG........AA......A....................A............C...................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  R  Q  L  N  P  K  I  
                    Query_12938  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGTGAGAAGGCAATTGAACCCCAAAATCT  270
V  91.9% (228/248)  IGHV3-7*03   227  ....................................................G..........C....----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (44/44)   IGHJ4*01     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12938  271  TTGACTACTGGGGCCAAGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (44/44)   IGHJ4*01     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_122456

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           316     2e-88
IGHD6-6*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAAATATCTCCTGGCATTG	GCTCGTC	AAGACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAATATCTCCTGGCATTGGCTCGTCAAGACCTCTATTTGACTTC	ARQISPGIGSSRPLFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  D  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12939  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCAGGATTCACCTTCGATAGTTATACTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.7% (225/248)  IGHV3-21*01  47   .....................C......T............AG...C....GC.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  S  A  Y  I  Q  Y  A  D  S  M  E  G  R  F  T  I  S  R  D  N  G  
                    Query_12939  91   AGTGGGTCTCATCCATCAGTAGTAGAAGTGCATACATACAATATGCGGACTCAATGGAGGGCCGATTCACCATCTCCAGAGACAACGGCA  180
V  90.7% (225/248)  IGHV3-21*01  137  ................T........T...AGT......T.C..C..A......G..A..............................C..  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  V  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  G  I  G  
                    Query_12939  181  AGAATTCACTGTATCTGCAAATGGTCAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGACAAATATCTCCTGGCATTGGCT  270
V  90.7% (225/248)  IGHV3-21*01  227  ....C..................AA...........................G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-6*01   11   ---------------------------------------------------------------------------------------...  13

                                      GT-------------------->                                  
                                      S  S  R  P  L  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12939  271  CGTCAAGACCTCTATTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (7/7)     IGHD6-6*01   14   ....-----------------------------------------------------  17
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_83568

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD3-10*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGGAT	GGGAGTTA	CGAA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATGGGAGTTACGAAACTTTGACTAC	ARGGWELRNFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_12940  1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGGTCTGGATACAGCTTCACCAACTA  90
V  96.2% (278/289)  IGHV5-51*03  6    ....................C.............................................T..............T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  T  Y  S  P
                    Query_12940  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCACATACAGCCC  180
V  96.2% (278/289)  IGHV5-51*03  96   ............................................................................A...G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  D  M  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12940  181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGACATGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (278/289)  IGHV5-51*03  186  ........A..........................A........G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  F  C  A  R  G  G  W  E  L  R  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12940  271  CATCTATTTCTGTGCGAGAGGGGGATGGGAGTTACGAAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.2% (278/289)  IGHV5-51*03  276  ...G....A..........----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD3-10*01  17   --------------------------........-------------------------------------------------  24
J  100.0% (45/45)   IGHJ4*02     4    --------------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_83569

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATTTGCTGA	TTCGGGGA	TTGAAAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGTC	AKFADSGIETYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	274	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  S  F
                    Query_12941  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTATCAGCTT  90
V  95.5% (274/287)  IGHV5-51*01  6    ...................................................................................C.....A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  T  G  L  E  C  L  G  I  I  D  P  R  D  S  D  T  T  Y  S  P
                    Query_12941  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGTGCTTGGGGATCATCGATCCTCGTGACTCTGATACCACATACAGCCC  180
V  95.5% (274/287)  IGHV5-51*01  96   ........G.......................A............GA...........T.....G...............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  T  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  A
                    Query_12941  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACCCCGC  270
V  95.5% (274/287)  IGHV5-51*01  186  .............................C...........T...........................................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  K  F  A  D  S  G  I  E  T  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_12941  271  CATGTATTATTGTGCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTC  360
V  95.5% (274/287)  IGHV5-51*01  276  .........C.......-------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                           
D  100.0% (8/8)     IGHD3-10*01  13   ---------------------------........-------------------------------------------------------  20
J  98.0% (48/49)    IGHJ6*02     14   ------------------------------------------.............................................C..  61

                                       
                                       
                    Query_12941  361  A  361
J  98.0% (48/49)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_175363

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           402     3e-114
IGHD1-26*01                                                                                           12.2    36    
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCCCTGCGTTCCC	AGTGGG	CCTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGACCCCTGCGTTCCCAGTGGGCCTTTGATGCTATTGATATC	VRPLRSQWAFDAIDI	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	4	2	0	66.7
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  E  N  S  F  T  N  Y
                    Query_12942  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGAAAACAGCTTTACCAACTA  90
V  94.5% (273/289)  IGHV5-51*03  6    .......................................................................G.T............G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  I  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  S  P  G  D  S  D  T  R  Y  S  P
                    Query_12942  91   CTGGATCGGCTGGATACGCCAGATGCCCGGGAAAGGCCTCGAGTGGATGGGGTTCATCTCTCCTGGTGACTCTGATACCAGATACAGCCC  180
V  94.5% (273/289)  IGHV5-51*03  96   .............G.G.......................G............A......A..............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  V  S  A  D  R  S  I  T  T  A  Y  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_12942  181  GTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAGGTCCATCACCACCGCCTACCTGCAGTGGAACAGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (273/289)  IGHV5-51*03  186  ......................A............A........G....................G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  V  R  P  L  R  S  Q  W  A  F  D  A  I  D  I  W  G  Q  G  T  M  V  T  V  S  S
                    Query_12942  271  TGTGTATTACTGTGTGCGACCCCTGCGTTCCCAGTGGGCCTTTGATGCTATTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  360
V  94.5% (273/289)  IGHV5-51*03  276  CA............C.A..-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD1-26*01  6    --------------------------------......----------------------------------------------------  11
J  98.0% (49/50)    IGHJ3*02     1    ------------------------------------------.......T........................................  48

                                        
                                        
                    Query_12942  361  AG  362
J  98.0% (49/50)    IGHJ3*02     49   ..  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_205522

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           355     3e-100
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_12943  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGCC  93
V  96.0% (237/247)  IGHV4-31*02  50   .....TCC...A.....................C......C.............................C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_12943  94   TGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  96.0% (237/247)  IGHV4-31*02  140  ....G.........T.C.........................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  
                    Query_12943  184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCG  273
V  96.0% (237/247)  IGHV4-31*02  230  ...................................................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  100.0% (51/51)   IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12943  274  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (51/51)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_205525

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            396     2e-112
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGAC	TGGTTCGGGGACTTA	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACTGGTTCGGGGACTTACCCCTTTGATTAC	ARVTGSGTYPFDY	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	72	3	0	96
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	102	12	0	89.5
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	295	274	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  G 
                    Query_12944  4    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCGGC  93
V  92.9% (274/295)  IGHV1-8*02   1    .....G.....G...........G...............................................................AC.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  M  D  P  N  S  G  N  T  D  Y 
                    Query_12944  94   AGCTATGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATGGATCCTAACAGTGGGAACACAGACTAT  183
V  92.9% (274/295)  IGHV1-8*02   91   ..............................A................................A.C...........T.......G....  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  Y  M  E  L  S  S  L  G  S  A  D 
                    Query_12944  184  GCACAGAAGTTCCGGGGCAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCTACATGGAGCTGAGTAGTCTGGGATCTGCCGAC  273
V  92.9% (274/295)  IGHV1-8*02   181  .............A.......................A...C..C.T........................C..C...A......AG...  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  Y  C  A  R  V  T  G  S  G  T  Y  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_12944  274  ACGGCCGTCTATTACTGTGCGAGAGTGACTGGTTCGGGGACTTACCCCTTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  363
V  92.9% (274/295)  IGHV1-8*02   271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  93.3% (14/15)    IGHD3-10*01  10   -----------------------------...........G...----------------------------------------------  24
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------......C....................................  47

                                       
                                       
                    Query_12944  364  G  364
J  97.7% (43/44)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_175364

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            385     4e-109
IGHD2-2*01                                                                                            10.3    134   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAATAGGAATTCTTG	CCAGC	ACCCCCCTTG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATAATAGGAATTCTTGCCAGCACCCCCCTTGCGGTATGGACGTC	ARDNRNSCQHPPCGMDV	273	323	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	27	3	0	90
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	25	2	0	92.6
FR3-IMGT	159	272	114	102	12	0	89.5
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	280	263	17	0	93.9


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  D  S  A  T  W  N  W  
                    Query_12945  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGCGACAGTGTCTCTAGCGACAGTGCTACTTGGAACTGGA  90
V  93.9% (263/280)  IGHV6-1*01   26   ....................................................G...............A........G............  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  E  W  Y  N  D  S  A  M  S  V  K  
                    Query_12945  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCTGAGTGGTATAATGATTCTGCAATGTCTGTGAAAG  180
V  93.9% (263/280)  IGHV6-1*01   116  .......................................................CA...............A....G.A.........A  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      G  R  V  T  I  N  P  D  T  S  K  Q  Q  F  S  L  H  L  I  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_12945  181  GTCGAGTAACCATCAACCCAGACACATCCAAGCAGCAGTTCTCCCTGCATCTGATTTCTGTGACTCCCGAGGACACAGCTGTGTATTATT  270
V  93.9% (263/280)  IGHV6-1*01   206  .....A..........................A.C..............G....AC....................G...........C.  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><--------------------CDR3-IMGT-------------------->                                 
                                      C  A  R  D  N  R  N  S  C  Q  H  P  P  C  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12945  271  GTGCAAGAGATAATAGGAATTCTTGCCAGCACCCCCCTTGCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  356
V  93.9% (263/280)  IGHV6-1*01   296  ..........----------------------------------------------------------------------------  305
                                      C  A  R                                                                               
D  100.0% (5/5)     IGHD2-2*01   18   -------------------------.....--------------------------------------------------------  22
J  100.0% (46/46)   IGHJ6*02     17   ----------------------------------------..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_337459

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           360     1e-101
IGHD6-13*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTT	TATAACAGCAGTTGG	GTGCTCGA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTTTATAACAGCAGTTGGGTGCTCGATGACTTC	ARDFYNSSWVLDDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  I  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12946  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAATCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-21*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  T  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12946  91   AGTGGGTCTCATCCATTAGTAGTAGTACTAGTTACATATATTATGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-21*01  137  ...........................G............C..C..............................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  R  S  L  Y  L  H  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  Y  N  S  S  W  
                    Query_12946  181  AGAGATCACTGTATCTGCACATGAACAACCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGATTTTTATAACAGCAGTTGGG  270
V  96.0% (240/250)  IGHV3-21*01  227  ...AC..............A.......G........................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD6-13*01  4    --------------------------------------------------------------------------....G......C...-  18

                                      ------------->                                
                                      V  L  D  D  F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12946  271  TGCTCGATGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  316
J  97.4% (38/39)    IGHJ4*02     8    -------.....A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_205526

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           265     5e-73
IGHD2-2*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GACGA	ATACTGTACTACTCCCGGCTGCT	TTAAGTACCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGACGAATACTGTACTACTCCCGGCTGCTTTAAGTACCCTTGACTCC	VKTNTVLLPAALSTLDS	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	125	24	13	8	3	54.2
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	244	5	4	1	0	80
Total	N/A	N/A	247	210	34	3	85


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  V  Y  V  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_12947  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCGTCTATGTCATGGCGTGGGTCCGCCAGGCTCCAGGGAGGGGCCTGG  90
V  85.0% (210/247)  IGHV3-23*01  47   ..........................................G.AG.....C....AGC......................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  T     G  N  G  A  A  A  Y  Y  A  D  S  V  K  G  R  F  N  I  S  R  D  N  S  
                    Query_12947  91   AGTGGGTCGCAGCGACT---GGAAATGGTGCAGCCGCATACTATGCCGACTCCGTGAAGGGCCGGTTCAACATCTCCAGGGACAATTCCG  177
V  85.0% (210/247)  IGHV3-23*01  137  ........T....T.T.AGT..T.G.....GTAG.A.......C..A......................C.........A.........A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      E  N  T  L  F  L  D  M  S  G  L  R  A  D  D  T  A  V  Y  Y  C  V  K  T  N  T  V  L  L  P  
                    Query_12947  178  AGAATACCCTTTTTCTGGATATGAGCGGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGTGAAGACGAATACTGTACTACTCCCGG  267
V  85.0% (210/247)  IGHV3-23*01  227  ....C..G..G.A....C.A....A.A.............G......................C...-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  78.3% (18/23)    IGHD2-2*01   4    ------------------------------------------------------------------------...T....G..G.A..A.  21

                                      GT-------------------->                                  
                                      A  A  L  S  T  L  D  S  W  G  Q  G  A  L  V  T  V  A  S  
                    Query_12947  268  CTGCTTTAAGTACCCTTGACTCCTGGGGCCAGGGAGCCCTGGTCACCGTCGCCTCAG  324
D  78.3% (18/23)    IGHD2-2*01   22   .....----------------------------------------------------  26
J  92.9% (39/42)    IGHJ4*02     7    ---------------......A.............A..............T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_175369

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         349     2e-98
IGHD5-12*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGAGGAT	TGGCTACGA	GACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGACCCCCTTTGACCTC	ARAGRIGYETPFDL	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_12948    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTACTCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  95.1% (235/247)  IGHV4-38-2*02  49   ................................................T.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  S  V  D  M  S  K 
                    Query_12948    91   GAGTGGATTGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATATCAGTAGACATGTCCAAG  180
V  95.1% (235/247)  IGHV4-38-2*02  139  ......................A.........C.........A..............A........................C.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  Q  F  S  L  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  T 
                    Query_12948    181  AACCAGTTCTCGTTGAATCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGAGCGGGGAGGATTGGCTACGAGACC  270
V  95.1% (235/247)  IGHV4-38-2*02  229  ...........CC....G....G...........C...............G................-----------------------  295
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD5-12*01    11   -----------------------------------------------------------------------------.........----  19

                                        ----------->                                  
                                         P  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12948    271  CCCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.5% (42/44)    IGHJ4*02       5    --.......TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_83561

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         335     4e-94
IGHD3-22*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTGGGT	TAGGGGTTAT	AAGGGTTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTGGGTTAGGGGTTATAAGGGTTTCTTTGACTAC	ARDPWVRGYKGFFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12949    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  92.8% (232/250)  IGHV3-30-3*01  47   ..............................................C......................................G....  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  D  E  N  Y  K  Y  Y  T  D  S  L  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12949    91   AGTGGGTGGCAGTTATCTCATATGATGAAAACTATAAATATTACACGGACTCCCTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-30-3*01  137  ................A..........G..G.A.......C...G.A......G....................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        R  N  T  L  Y  L  Q  M  N  T  L  T  L  D  D  T  A  V  Y  Y  C  A  R  D  P  W  V  R  G  Y  
                    Query_12949    181  GGAACACCCTGTATCTGCAGATGAACACCCTGACACTTGACGACACGGCTGTGTATTACTGTGCGAGAGATCCTTGGGTTAGGGGTTATA  270
V  92.8% (232/250)  IGHV3-30-3*01  227  A......G...........A.......G.....G.GC...G.............................--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-22*01    16   -------------------------------------------------------------------------------...T......-  25

                                        ---------------->                                  
                                        K  G  F  F  D  Y  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_12949    271  AGGGTTTCTTTGACTACTGGGGCCAGGGAAGTCTGGTCATTGTCTCCTCAG  321
J  90.9% (40/44)    IGHJ4*02       5    -------.......................CC.......CC..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_83562

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            346     2e-97
IGHD6-19*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	CCCGGC	GGTCTAGCAGTGGCTGGTAC	CCCCAATAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGCCCGGCGGTCTAGCAGTGGCTGGTACCCCCAATATTTTGACTTC	ATARRSSSGWYPQYFDF	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  S  W  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_12950  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTCTTCTTGGTTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-7*01   47   ........................................T...AGC.A....A...G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  H  D  G  T  E  K  F  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12950  91   AGTGGGTGGCCAACATAAAGCATGATGGAACTGAGAAATTCTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-7*01   137  ......................A.......G........A..................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  T  A  R  R  S  S  S  G  
                    Query_12950  181  AGAACTCACTCTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTTCTGTGCGACAGCCCGGCGGTCTAGCAGTGGCT  270
V  94.4% (235/249)  IGHV3-7*01   227  ..........G.........................C....................A........G..---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  95.0% (19/20)    IGHD6-19*01  2    ---------------------------------------------------------------------------...A...........  16

                                      GT-------------------->                                  
                                      W  Y  P  Q  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12950  271  GGTACCCCCAATATTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.0% (19/20)    IGHD6-19*01  17   .....----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    --------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_83563

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           325     3e-91
IGHD4-17*01                                                                                           14.1    8.6  
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTGTC	CGGCGACTAC	CTTCCGTACATAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTGTCCGGCGACTACCTTCCGTACATACACTGGTTCGACCCC	ARHVSGDYLPYIHWFDP	246	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  T  S  A  N  Y  Y  W  G  W  I  R  Q  S  P  G  K  G  
                    Query_12951  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCACCAGTGCTAATTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGCC  93
V  91.6% (229/250)  IGHV4-39*01  50   .....TCC...A....C......................G....AG..G.........................C.............G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  T  I  Y  Y  R  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_12951  94   TGGAGTGGATTGGGACTATCTATTATCGTGGGAGTACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCCGTAGACACGTCCA  183
V  91.6% (229/250)  IGHV4-39*01  140  ...............G..........A.......C......................................A................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      N  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  V  S  G  D  Y  L  
                    Query_12951  184  ACAACCAATTTTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTCTACTATTGTGCGAGACATGTGTCCGGCGACTACCTTC  273
V  91.6% (229/250)  IGHV4-39*01  230  .G.....G..C.........................................G..T..C...........--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD4-17*01  7    ----------------------------------------------------------------------------...T......----  16

                                      GT-------------------->                                  
                                      P  Y  I  H  W  F  D  P  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_12951  274  CGTACATACACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  330
J  97.9% (47/48)    IGHJ5*02     4    ---------...................................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_83564

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    8.2  
IGHJ5*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TTGTC	GGATACA	CCTCTCTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTGTCGGATACACCTCTCTCGACTGGTTCGACCCC	VVGYTSLDWFDP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  S  S  R  Y  Y  W  G  W  I  R  Q  P  P  G  E  G 
                    Query_12952  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGCCTCCATCAGCAGTAGTCGTTACTACTGGGGTTGGATCCGCCAGCCCCCAGGGGAGGGG  90
V  91.4% (223/244)  IGHV4-39*01  49   .............................T.G................A.............C.....................A.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  Y  Y  P  E  S  P  Y  Y  N  P  S  L  N  Y  R  V  T  M  S  V  D  T  P 
                    Query_12952  91   CTGGAGTGGCTTGGGAGTATCTATTATCCTGAGAGCCCCTACTACAACCCGTCCCTCAATTATCGAGTCACCATGTCCGTAGACACGCCC  180
V  91.4% (223/244)  IGHV4-39*01  139  .........A.................AG..G....A......................GAG............A............T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  D  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  G  Y  T  S  L  D  W 
                    Query_12952  181  AAGAACCAGTTCTCCCTGAGACTTGACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGTTGTCGGATACACCTCTCTCGACTGG  270
V  91.4% (223/244)  IGHV4-39*01  229  ...................AG..GAG...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (7/7)     IGHD5-18*01  3    ---------------------------------------------------------------------.......--------------  9
J  100.0% (48/48)   IGHJ5*02     4    -------------------------------------------------------------------------------------.....  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12952  271  TTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ5*02     9    ...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_64158

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           350     8e-99
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCAGGCG	GGCTGG	G	AACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCAGGCGGGCTGGGAACGGGTTCGGCCCC	ARGRRAGNGFGP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_12953  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTGGGGCTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*03  49   .........................................C.....T.G............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  E  N  T  H  Y  N  P  S  L  K  S  R  L  T  I  S  G  D  T  S 
                    Query_12953  91   CTGGAGTGGATTGGATACATCTATTACGGTGAGAACACCCACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGGAGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*03  139  ..............G............A...G..G....T..........................G............T..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       T  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  G 
                    Query_12953  181  ACGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCAGGCGGGCTGGGAACGGG  270
V  94.8% (237/250)  IGHV4-31*03  229  .A.................A..................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------......-------  18
J  91.8% (45/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------...T..  8

                                      -------->                                  
                                       F  G  P  W  G  Q  G  T  L  V  T  V  T  S  
                    Query_12953  271  TTCGGCCCCTGGGGCCAGGGAACCCTGGTCACCGTCACATCAG  313
J  91.8% (45/49)    IGHJ5*02     9    ....A...............................T.C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_83566

Length=415
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           413     2e-117
IGHD2-21*02                                                                                           52.6    3e-11 
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GATTAGGGGTG	GCATATTGTGGTGGTGACTGCTATTCC	GACCC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGATTAGGGGTGGCATATTGTGGTGGTGACTGCTATTCCGACCCCTACGATTACTACGGTTTGGACGTC	ARRLGVAYCGGDCYSDPYDYYGLDV	284	358	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  D  F  T  A  Y
                    Query_12954  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACGACTTTACCGCCTA  90
V  95.5% (277/290)  IGHV5-51*01  6    .................................................................G..........AG.......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  T  I  Y  P  G  D  S  D  T  G  Y  S  P
                    Query_12954  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGACCATCTATCCTGGTGACTCTGATACCGGATACAGCCC  180
V  95.5% (277/290)  IGHV5-51*01  96   ........G............................................T.........................A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  V  Y  L  Q  W  S  S  L  G  A  S  D  T  A
                    Query_12954  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGTCTACCTGCAGTGGAGCAGCCTGGGGGCCTCGGACACCGC  270
V  95.5% (277/290)  IGHV5-51*01  186  ............................................G.....C......................AA...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------------------CDR3-IMGT-------------------------------->  
                                        I  Y  Y  C  A  R  R  L  G  V  A  Y  C  G  G  D  C  Y  S  D  P  Y  D  Y  Y  G  L  D  V  W
                    Query_12954  271  CATATATTACTGTGCGAGACGATTAGGGGTGGCATATTGTGGTGGTGACTGCTATTCCGACCCCTACGATTACTACGGTTTGGACGTCTG  360
V  95.5% (277/290)  IGHV5-51*01  276  ...G................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (27/27)   IGHD2-21*02  2    -------------------------------...........................--------------------------------  28
J  93.1% (54/58)    IGHJ6*02     5    ---------------------------------------------------------------....T.C.........A..........  31

                                                                     
                                        G  Q  G  T  T  V  A  V  S  S 
                    Query_12954  361  GGGCCAAGGGACCACGGTCGCCGTCTCCTCA  391
J  93.1% (54/58)    IGHJ6*02     32   ...................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40709304


Query= Query_83567

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           336     1e-94
IGHD6-19*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGGTTGGGCAA	CAGTGGCTGGT	CCGGAGT	CTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGTTGGGCAACAGTGGCTGGTCCGGAGTCTTTAACTTC	ARGGLGNSGWSGVFNF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  N  M  R  W  V  R  Q  P  P  G  K  G  L  
                    Query_12955  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTTTAATATGCGCTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGG  90
V  93.2% (232/249)  IGHV3-30*04  47   ................................................A.GC.....A.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      G  W  L  A  V  I  S  Y  D  G  S  N  G  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12955  91   GGTGGTTGGCAGTTATATCATATGATGGAAGTAATGGACACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.2% (232/249)  IGHV3-30*04  137  A....G.............................AA.T...................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  G  T  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  R  G  G  L  G  N  S  G  
                    Query_12955  181  AGGGCACCCTGTATCTGGAAATGAACAGTCTGAGAGTTGAGGACACGGCTGTGTATTTCTGTGCGAGAGGGGGGTTGGGCAACAGTGGCT  270
V  93.2% (232/249)  IGHV3-30*04  227  ..AA...G.........C..........C.......C....................A...........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-19*01  9    ----------------------------------------------------------------------------------........  16

                                      T------------------>                                  
                                      W  S  G  V  F  N  F  W  G  Q  G  P  L  V  P  V  S  P  
                    Query_12955  271  GGTCCGGAGTCTTTAACTTCTGGGGCCAGGGACCCCTGGTCCCCGTCTCCCCAG  324
D  100.0% (11/11)   IGHD6-19*01  17   ...---------------------------------------------------  19
J  88.6% (39/44)    IGHJ4*02     5    ----------....G...A.............A........A........T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_206873

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           324     7e-91
IGHD3-10*01                                                                                           10.3    118  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_12956  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-21*01  47   ............................................AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  T  T  S  E  F  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  G  N  A  
                    Query_12956  91   AGTGGGTCTCATCCATTAGTACTACTAGTGAGTTCATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGGCAACGCCA  180
V  91.6% (228/249)  IGHV3-21*01  137  .....................G..G....AGT.A......C...G..........................A.......A.A........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  S  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_12956  181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGCGCCGAGGACACGGCTCTCTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTT  270
V  91.6% (228/249)  IGHV3-21*01  227  ............A......A..............A...............G.G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_12956  271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_206870

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD1-26*01                                                                                           10.3    113  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCGGAAGAA	GGGAG	ATC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGGAAGAAGGGAGATCGACTAC	AGGRREIDY	240	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	14	7	0	66.7
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	242	3	3	0	0	100
Total	N/A	N/A	239	219	20	0	91.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  T  N  H  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_12957  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCACTAATCACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  91.6% (219/239)  IGHV4-59*01  50   .....TCC...A...........................G..G.T.........G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  L  Y  Y  D  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_12957  94   GGATTGGGTATCTTTATTACGATGGTGACACCAAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAACC  183
V  91.6% (219/239)  IGHV4-59*01  140  ...........A.C......AG...GAG......C......................................A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------CDR3-IMGT-------->       
                                      Q  F  S  L  K  L  S  S  V  T  A  A  G  T  A  V  Y  Y  C  A  G  G  R  R  E  I  D  Y  W  G  
                    Query_12957  184  AGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGGCACGGCCGTCTATTACTGTGCGGGCGGAAGAAGGGAGATCGACTACTGGGGCC  273
V  91.6% (219/239)  IGHV4-59*01  230  ..............C.....................A.........G............-------------------------------  288
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (5/5)     IGHD1-26*01  9    ---------------------------------------------------------------------.....----------------  13
J  100.0% (40/40)   IGHJ4*02     9    -----------------------------------------------------------------------------.............  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_12957  274  AGGGAACCCTGGTCACCGTCTCCTCAG  300
J  100.0% (40/40)   IGHJ4*02     22   ...........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_206871

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            372     2e-105
IGHD3-16*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCAGGGGAGTGGTTTACA	TATGATTTCGTTTGGGGGAGT	AACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACCAGGGGAGTGGTTTACATATGATTTCGTTTGGGGGAGTAACCCCCTTTGACTAC	AKDQGSGLHMISFGGVTPFDY	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12958  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  97.6% (244/250)  IGHV3-9*01   47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  L  N  W  N  S  A  N  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12958  91   AGTGGGTCTCAGGTCTTAATTGGAATAGTGCTAACATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (244/250)  IGHV3-9*01   137  ..............A...G...........G..G........................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  Q  G  S  G  L  H  
                    Query_12958  181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCCTGTATTACTGTGCAAAAGACCAGGGGAGTGGTTTACATA  270
V  97.6% (244/250)  IGHV3-9*01   227  ..........G.......................................T...................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  95.2% (20/21)    IGHD3-16*01  5    ----------------------------------------------------------------------------------------..  6

                                      DR3-IMGT-------------------------->                                  
                                      M  I  S  F  G  G  V  T  P  F  D  Y  W  G  Q  G  T  L  V  T  F  S  S  
                    Query_12958  271  TGATTTCGTTTGGGGGAGTAACCCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCTTCTCCTCAG  339
D  95.2% (20/21)    IGHD3-16*01  7    .....A.............--------------------------------------------------  25
J  97.7% (43/44)    IGHJ4*02     5    -------------------------..................................G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_206876

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           397     7e-113
IGHJ6*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCCCTCCTTCGATC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTCCTTCGATCTGGACGTC	ASPPSFDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	271	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_12959  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  94.1% (271/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_12959  91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  94.1% (271/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  P  P  D  T  A
                    Query_12959  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGCCCCCGGACACCGC  270
V  94.1% (271/288)  IGHV5-51*01  186  ...............G.........................T.........................A........G..T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  F  Y  C  A  S  P  P  S  F  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12959  271  CATTTTCTACTGTGCGAGTCCTCCCTCCTTCGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  94.1% (271/288)  IGHV5-51*01  276  ...G.AT...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  97.6% (40/41)    IGHJ6*02     22   -----------------------------------.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_206877

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*03                                                                                           318     6e-89
IGHD3-22*01                                                                                           16.1    2.4  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*03	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGTCTTACGGGAGG	ATTACTCTGGTAGT	GGTCGTCAGTCAACCTCCCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGTCTTACGGGAGGATTACTCTGGTAGTGGTCGTCAGTCAACCTCCCCCTACTATTTCTATGCTATGGACGTC	ARVLREDYSGSGRQSTSPYYFYAMDV	243	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  V  S  G  F  T  F  S  R  N  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12960  1    GGTCCCTGAGACTCTCCTGTGAAGTTTCTGGATTCACCTTCAGCAGGAACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTAG  90
V  91.1% (225/247)  IGHV3-74*03  47   .....................C..CC.................T..CT........................................G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  V  N  T  D  G  T  E  T  T  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_12960  91   TGTGGGTCTCACGTGTTAATACTGATGGGACTGAAACAACGTACGCGGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  91.1% (225/247)  IGHV3-74*03  137  ..............A......G........G.AGC....................................A..................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  L  R  E  D  Y  S  
                    Query_12960  181  AAAACACTCTATATCTACAAATGGACAGTCTGAGAGCCGAGGACACGGCTGTATATTATTGTGCCAGGGTCTTACGGGAGGATTACTCTG  270
V  91.1% (225/247)  IGHV3-74*03  227  .G.....G..G.....G......A............................G.....C.....A..-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  85.7% (12/14)    IGHD3-22*01  3    ---------------------------------------------------------------------------------......A..  11

                                      -------CDR3-IMGT--------------------------------->                                 
                                      G  S  G  R  Q  S  T  S  P  Y  Y  F  Y  A  M  D  V  W  G  Q  G  T  T  V  T  L  S  S 
                    Query_12960  271  GTAGTGGTCGTCAGTCAACCTCCCCCTACTATTTCTATGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCCTCTCCTCA  353
D  85.7% (12/14)    IGHD3-22*01  12   A....------------------------------------------------------------------------------  16
J  91.4% (53/58)    IGHJ6*02     5    -------------------------......C.A...C.G..................................G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_125105

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           438     5e-125
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ACCCTCGG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTCGGTGCTCTTGATATC	ARTLGALDI	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	284	4	0	98.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_12961  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAGCTAT  91
V  98.6% (284/288)  IGHV1-18*01  7    ..........................................................................................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_12961  92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAATTATGCACAG  181
V  98.6% (284/288)  IGHV1-18*01  97   ...................................G.........................C..................C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_12961  182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  98.6% (284/288)  IGHV1-18*01  187  ...C......................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------CDR3-IMGT-------->                                  
                                       V  Y  Y  C  A  R  T  L  G  A  L  D  I  W  G  Q  G  A  M  V  T  V  S  S  
                    Query_12961  272  GTGTATTACTGTGCGAGAACCCTCGGTGCTCTTGATATCTGGGGCCAAGGGGCAATGGTCACCGTCTCTTCAG  344
V  98.6% (284/288)  IGHV1-18*01  277  ..................-------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                        
J  95.7% (45/47)    IGHJ3*02     4    --------------------------....T....................A.....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_117174

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           311     4e-87
IGHD2-21*02                                                                                           18.0    0.59 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GCGTGGAAGCC	GTGACTGCCATT	AAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGCGTGGAAGCCGTGACTGCCATTAATTACTTTGACTCC	AKGVEAVTAINYFDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	224	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  N  F  G  S  Y  A  M  Y  W  V  R  Q  A  P  A  K  G  L  
                    Query_12962  1    GGTCCCTGAGACTCTCCTGCGTAGCCTCTGGATTCAACTTCGGAAGTTATGCCATGTACTGGGTCCGCCAGGCTCCAGCCAAGGGGCTGG  90
V  90.0% (224/249)  IGHV3-30*18  47   ...................T.C..............C....A.T..C....G....C.....................G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  L  S  Y  D  E  T  D  K  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  S  
                    Query_12962  91   AGTGGGTGGCATTTCTTTCATATGATGAAACTGATAAGAACTATGCAGACTCCGTGAAGGGGCGATTCACCATCTCCAGAGACACTTCCA  180
V  90.0% (224/249)  IGHV3-30*18  137  ...........G..A.A..........G..G.A....AT......................C......................A.....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  F  L  Q  M  N  S  L  R  P  D  D  T  A  V  Y  F  C  A  K  G  V  E  A  V  T  A  
                    Query_12962  181  AGAACACGCTGTTTCTGCAGATGAACAGCCTGAGACCTGACGACACGGCTGTATATTTCTGTGCGAAAGGCGTGGAAGCCGTGACTGCCA  270
V  90.0% (224/249)  IGHV3-30*18  227  ............A......A...............G....G...........G....A...........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  91.7% (11/12)    IGHD2-21*02  15   --------------------------------------------------------------------------------........T.  24

                                      ---------------->                                  
                                      I  N  Y  F  D  S  W  G  Q  G  T  L  V  V  V  S  S  
                    Query_12962  271  TTAATTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCGTCGTCTCCTCAG  321
D  91.7% (11/12)    IGHD2-21*02  25   ..-------------------------------------------------  26
J  93.5% (43/46)    IGHJ4*02     3    -----..........A......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_117175

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         367     6e-104
IGHD4-17*01                                                                                           21.8    0.040 
IGHJ5*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGACTACGGTG	GTGACTC	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATGACTACGGTGGTGACTCCAATTGGTTCGACCCC	VRDDYGGDSNWFDP	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	243	8	0	96.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  R  G 
                    Query_12963    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTCCTGGAGCTGGATCCGGCAGCCACCAGGGAGGGGC  90
V  96.8% (243/251)  IGHV4-30-2*01  49   .....................................................................................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  S  Y  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S 
                    Query_12963    91   CTGGAGTGGATTGGGTACATCTATCATAGTGGGAGCTCCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCAATAGACACGTCC  180
V  96.8% (243/251)  IGHV4-30-2*01  139  ....................................A.....................................A...G......G....  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  R  D  D  Y  G  G  D  S 
                    Query_12963    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGTCAGAGATGACTACGGTGGTGACTCC  270
V  96.8% (243/251)  IGHV4-30-2*01  229  .....................................................G.....C....C......-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD4-17*01    1    -----------------------------------------------------------------------...........--------  11
J  97.9% (47/48)    IGHJ5*02       2    -----------------------------------------------------------------------------------------.  2

                                        -------------->                                
                                         N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12963    271  AATTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  317
J  97.9% (47/48)    IGHJ5*02       3    ..C............................................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_206878

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	18	6	0	75
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_12964  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCACTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AGT.A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  S  I  S  V  D  T  S  K  S 
                    Query_12964  91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGGGCCTCCATTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T.A....A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_12964  181  CAGTTCTCCCTGAAACTGAGGTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGCAGTGGATATAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ..............G.....C..................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12964  271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_64982

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           357     1e-100
IGHD4-17*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGTAGGG	ACGGTGACTAC	GGGGCGGG	CTTAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCGTAGGGACGGTGACTACGGGGCGGGCTTAGAGTAC	ARDRRDGDYGAGLEY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  L  S  T  S  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12965  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCGCCTTAAGTACCTCTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-33*01  47   ...................................A....C....G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  E  S  
                    Query_12965  91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGATTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGAATCCA  180
V  95.6% (239/250)  IGHV3-33*01  137  .................................................C.................................A.T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  H  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  D  R  R  D  G  D  Y  
                    Query_12965  181  AGAACACGCTGCATCTGCAGATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGACCGTAGGGACGGTGACTACG  270
V  95.6% (239/250)  IGHV3-33*01  227  ...........T.......A....................G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD4-17*01  6    ------------------------------------------------------------------------------...........-  16

                                      ---------------->                                  
                                      G  A  G  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12965  271  GGGCGGGCTTAGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  95.5% (42/44)    IGHJ4*02     5    -------...T..C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_64985

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           251     9e-69
IGHD6-25*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AG	ATAGCGGCGGC	CACTACCCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAAGATAGCGGCGGCCACTACCCCCCTTTTGACCTC	VREDSGGHYPPFDL	258	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	257	132	100	14	18	75.8
CDR3-IMGT (germline)	258	265	8	7	1	0	87.5
Total	N/A	N/A	262	213	31	18	81.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  G  S  L  N  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_12966  4    CCCTGAGACTCTCCTGTAGTGTCTCTGGTGGCTCCTTGAACACATACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  81.3% (213/262)  IGHV4-59*01  50   .....TCC...A....C.C................A.C.GT.GT..............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><---------------------------------------------------------
                                      W  I  G  Y  V  L  Y  S  G  N  T  R  Y  R  P  S  T  K  Y  N  P  S  L  E  S  R  V  T  I  S  
                    Query_12966  94   GGATTGGGTATGTCCTTTACAGTGGGAACACCAGATATAGACCCTCCACCAAGTACAACCCCTCCCTCGAGAGTCGGGTCACTATTTCAG  183
V  81.3% (213/262)  IGHV4-59*01  140  ...........A..TA...........G.....------------------.C...............A.......A.....C..A....  211
                                      W  I  G  Y  I  Y  Y  S  G  S  T                    N  Y  N  P  S  L  K  S  R  V  T  I  S  

                                      ----FR3-IMGT-------------------------------------------------------------><---------------
                                      V  D  T  S  K  N  Q  I  S  L  N  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  V  R  E  D  S  
                    Query_12966  184  TTGACACCTCCAAGAACCAGATCTCCCTGAACCTGACCTCTGTGACCGCTGCGGACACGGCCGTTTACTTCTGCGTGAGAGAAGATAGCG  273
V  81.3% (213/262)  IGHV4-59*01  212  .A.....G............T..........G....G...........................G..T.A...T.C......--------  293
                                      V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R           
D  90.9% (10/11)    IGHD6-25*01  5    ------------------------------------------------------------------------------------.....A  10

                                      -CDR3-IMGT--------------->                                  
                                      G  G  H  Y  P  P  F  D  L  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_12966  274  GCGGCCACTACCCCCCTTTTGACCTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  333
D  90.9% (10/11)    IGHD6-25*01  11   .....-------------------------------------------------------  15
J  93.0% (40/43)    IGHJ4*02     6    -----------------......TA......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_64984

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           431     4e-123
IGHD2-2*01                                                                                            19.9    0.18  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACCG	TGTAGTAGTA	GTGCCTGTTATTCGCGT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACCGTGTAGTAGTAGTGCCTGTTATTCGCGTTACGGCATGGACGTC	ARVPCSSSACYSRYGMDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	283	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_12967  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  97.6% (283/290)  IGHV1-69*01  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  F  I  P  P  F  G  T  A  N  H  A  Q
                    Query_12967  91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGTTCATCCCTCCCTTTGGTACAGCAAATCACGCACA  180
V  97.6% (283/290)  IGHV1-69*01  96   .......................................................A........AT...............CT.......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_12967  181  GAAGTTCCAGGGAAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  97.6% (283/290)  IGHV1-69*01  186  ............C.............................................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  V  P  C  S  S  S  A  C  Y  S  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T
                    Query_12967  271  CGTGTATTACTGTGCGAGAGTACCGTGTAGTAGTAGTGCCTGTTATTCGCGTTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCAC  360
V  97.6% (283/290)  IGHV1-69*01  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD2-2*01   8    -------------------------..........-------------------------------------------------------  17
J  97.9% (47/48)    IGHJ6*02     15   ----------------------------------------------------.....T................................  52

                                                
                                        V  S  S 
                    Query_12967  361  CGTCTCCTCA  370
J  97.9% (47/48)    IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_117172

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           347     7e-98
IGHD4-17*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGTAGGG	ACGGTGACTAC	GGGGCGGGCCTTGAGCAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCGTAGGGACGGTGACTACGGGGCGGGCCTTGAGCAT	ARERRDGDYGAGLEH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12968  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTAAGTTCCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-33*01  47   ........................................C...AG.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  E  S  
                    Query_12968  91   AGTGGGTGTCAGTTATATGGTATGATGGAAGTAATAAATACTATGCAGACGCCGTGAAGGGCCGATTCACCATCTCCAGAGACGAATCCG  180
V  94.4% (236/250)  IGHV3-33*01  137  ........G.........................................T................................A.T...A  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  T  M  H  L  Q  M  S  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  R  R  D  G  D  Y  
                    Query_12968  181  AGAACACGATGCATCTGCAAATGAGCAGCCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGCGAGAGAGCGTAGGGACGGTGACTACG  270
V  94.4% (236/250)  IGHV3-33*01  227  ........C..T............A.........................G.G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD4-17*01  6    ------------------------------------------------------------------------------...........-  16

                                      ---------------->                                  
                                      G  A  G  L  E  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12968  271  GGGCGGGCCTTGAGCATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (34/34)   IGHJ4*02     15   -----------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_64986

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD2-8*02                                                                                            18.0    0.61 
IGHJ5*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-8*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATTGTCGGTGTTGGC	TATTGCACTGGT	AGCAGTTGTTCCCCTCCGTCT	GACGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGTCGGTGTTGGCTATTGCACTGGTAGCAGTTGTTCCCCTCCGTCTGACGCC	ARIVGVGYCTGSSCSPPSDA	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  F  S  Y  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_12969  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGGTCCTTCAGTTATTACTACTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTGGAG  90
V  91.4% (222/243)  IGHV4-34*01  49   ..................G......A................GG............C...A.............A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  D  I  N  Q  S  G  S  T  N  Y  S  P  S  L  E  S  R  V  T  V  S  I  D  T  S  K  N 
                    Query_12969  91   TGGATTGGTGACATCAATCAAAGTGGAAGCACCAACTACAGCCCGTCCCTCGAGAGTCGAGTCACCGTATCAATAGACACGTCGAAGAAC  180
V  91.4% (222/243)  IGHV4-34*01  139  ........G..A........T...................A..........A..............A.....G..........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  K  S  L  A  A  A  D  T  A  V  Y  F  C  A  R  I  V  G  V  G  Y  C  T  G 
                    Query_12969  181  CAGTTCTCCCTGAAGCTGAAGTCTTTGGCCGCCGCGGACACGGCTGTCTATTTCTGTGCGAGAATTGTCGGTGTTGGCTATTGCACTGGT  270
V  91.4% (222/243)  IGHV4-34*01  229  ...................GC...G..A...................G....A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD2-8*02   5    ------------------------------------------------------------------------------.....T......  16

                                      GT------------------------>                                
                                       S  S  C  S  P  P  S  D  A  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12969  271  AGCAGTTGTTCCCCTCCGTCTGACGCCTGGGGCCAGGGAACTCTGGTCACCGTCTCCTC  329
J  94.7% (36/38)    IGHJ5*02     12   ---------------------...C................C.................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_183533

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           353     1e-99
IGHD6-19*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAGTGGGCCTTACGCC	GGGTATAGTAGTGGC	CAGGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGTGGGCCTTACGCCGGGTATAGTAGTGGCCAGGCTTTTGACCAC	ARDSGPYAGYSSGQAFDH	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_12970  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  95.2% (238/250)  IGHV3-21*01  47   ........................................C...AG.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  A  R  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_12970  91   AGTGGGTCTCATCAATTAGTGCTAGGAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-21*01  137  .............C......AG...T................................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  H  L  Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  G  P  Y  A  G  
                    Query_12970  181  AGAACTCACTGCATCTGCAAATGAACACCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGCGAGACAGTGGGCCTTACGCCGGGT  270
V  95.2% (238/250)  IGHV3-21*01  227  ...........T...............G........................G............A....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  93.3% (14/15)    IGHD6-19*01  1    --------------------------------------------------------------------------------------....  4

                                      IMGT--------------------->                                  
                                      Y  S  S  G  Q  A  F  D  H  W  G  L  G  T  L  V  T  V  S  S  
                    Query_12970  271  ATAGTAGTGGCCAGGCTTTTGACCACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  330
D  93.3% (14/15)    IGHD6-19*01  5    ....C......-------------------------------------------------  15
J  95.3% (41/43)    IGHJ4*02     6    -----------------......T.........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_183532

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_12971  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_12971  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_12971  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_12971  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_183535

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            321     7e-90
IGHD1-26*01                                                                                           12.2    32   
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GCTACT	TGCGGTTTTCGGGCCAGCTTCTCTAT	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTACTTGCGGTTTTCGGGCCAGCTTCTCTATATGCTTTGGATATC	ARLLAVFGPASLYALDI	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_12972  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAATAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  91.8% (225/245)  IGHV4-4*02   49   ..................G......................C....G...C.......................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  Q  I  H  H  N  G  S  T  T  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  K 
                    Query_12972  91   GAGTGGATTGGGCAAATCCATCATAATGGGAGCACCACCTACAACCCCTCCCTTAAGAGTCGCGTCACCATATCATTGGACAAGTCCAAG  180
V  91.8% (225/245)  IGHV4-4*02   139  ............G.....T......G...........A.........G.....C........A............G.A............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       D  H  F  S  L  R  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  L  A  V  F  G  P  A 
                    Query_12972  181  GACCACTTCTCCCTGAGGGTGACCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGGCTACTTGCGGTTTTCGGGCCAGCT  270
V  91.8% (225/245)  IGHV4-4*02   229  A....G..........A.C...G...............G...........G..............-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (6/6)     IGHD1-26*01  13   -----------------------------------------------------------------......-------------------  18

                                      -------------------->                                  
                                       S  L  Y  A  L  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_12972  271  TCTCTATATGCTTTGGATATCTGGGGCCAAGGGACAATGGTCATCGTCTCCTCAG  325
J  93.8% (45/48)    IGHJ3*02     3    -------.......T............................C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_183534

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           364     5e-103
IGHD3-10*01                                                                                           14.1    8.1   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTA	GGG	CGGGGAG	AGGGGG	CTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGGGCGGGGAGAGGGGGCTTGGACTAC	RAGRGGLDY	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	249	1	1	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_12973  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  96.8% (241/249)  IGHV3-73*01  47   .........A................................................................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  H  I  R  S  I  S  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_12973  91   AGTGGGTTGGCCATATTAGAAGCATCTCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATG  180
V  96.8% (241/249)  IGHV3-73*01  137  ............G...........AAG...............................................................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  E  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  R  A  G  R  G  G  L  
                    Query_12973  181  ATTCAGAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTCTATTATTGTAGGGCGGGGAGAGGGGGCTTGG  270
V  96.8% (241/249)  IGHV3-73*01  227  .....A....................................................G.....C....---------------------  295
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  100.0% (7/7)     IGHD3-10*01  15   ------------------------------------------------------------------------.......-----------  21
J  97.7% (43/44)    IGHJ4*02     5    -------------------------------------------------------------------------------------...T.  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12973  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.7% (43/44)    IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_183537

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           335     4e-94
IGHD6-25*01                                                                                           12.2    31   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-25*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGGG	GCATCGGCT	GAGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGGGCATCGGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
Total	N/A	N/A	242	228	14	0	94.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12974  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.2% (228/242)  IGHV3-33*03  47   .....................................C..C.....C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  K  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_12974  91   AGTGGGTGGCAGTTATATGGTATGATGGAATTAAAAAATACTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCA  180
V  94.2% (228/242)  IGHV3-33*03  137  ..............................G...T..........C.....................................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_12974  181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTATTGTACAGGGGCATCGGCTGAGGGGTGGTTCG  270
V  94.2% (228/242)  IGHV3-33*03  227  .......G....A......A..............................G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  88.9% (8/9)      IGHD6-25*01  8    --------------------------------------------------------------------...G.....-------------  16
J  100.0% (46/46)   IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12974  271  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (46/46)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_183536

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           417     6e-119
IGHD2-2*01                                                                                            21.8    0.045 
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTCCCG	GTAGTACCAGC	GACCTGGAGTT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCCCGGTAGTACCAGCGACCTGGAGTTTGGACGTC	ARFPVVPATWSLDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_12975  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  96.2% (278/289)  IGHV1-69*01  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        T  I  S  W  V  R  Q  G  P  G  Q  G  L  E  W  M  G  G  I  K  P  S  F  G  T  T  N  Y  A  Q
                    Query_12975  91   TACTATCAGCTGGGTGCGACAGGGCCCTGGACAAGGTCTTGAGTGGATGGGAGGGATCAAGCCTAGCTTTGGAACAACAAACTACGCACA  180
V  96.2% (278/289)  IGHV1-69*01  96   .G.....................C............G......................TC....T......T...G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_12975  181  GAAGTTCCAGGACAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGTAGCCTGAGATCTGAGGACACGGC  270
V  96.2% (278/289)  IGHV1-69*01  186  ...........G......................................................C.......................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                 
                                        V  Y  Y  C  A  R  F  P  V  V  P  A  T  W  S  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12975  271  CGTGTATTACTGTGCGAGATTCCCGGTAGTACCAGCGACCTGGAGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  358
V  96.2% (278/289)  IGHV1-69*01  276  ...................---------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                      
D  100.0% (11/11)   IGHD2-2*01   12   -------------------------...........----------------------------------------------------  22
J  100.0% (41/41)   IGHJ6*02     22   -----------------------------------------------.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_183538

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           353     1e-99
IGHD4-4*01                                                                                            16.1    2.4  
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-4*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAGGGGGGG	GACTAAAGTAA	TTGGGGGGGGCTGGACTACCCAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAGGGGGGGGACTAAAGTAATTGGGGGGGGCTGGACTACCCAGACTACGGTATGGACGTC	AKDKGGD*SNWGGLDYPDYGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  T  L  T  T  Y  A  M  S  W  V  R  L  G  P  G  K  R  L  
                    Query_12976  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAGTCACTCTTACCACCTATGCCATGAGCTGGGTCCGCCTGGGTCCAGGGAAGCGGCTGG  90
V  95.2% (238/250)  IGHV3-23*01  47   ................................T....CT...G..G.......................A..C..........G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  N  G  V  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12976  91   AATGGGTCTCAGGTATTAGTGGTAATGGTGTTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (238/250)  IGHV3-23*01  137  .G..........C...........G.....G...........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  K  G  G  D  *  S  
                    Query_12976  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATAAGGGGGGGGACTAAAGTA  270
V  95.2% (238/250)  IGHV3-23*01  227  ......................................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.9% (10/11)    IGHD4-4*01   2    --------------------------------------------------------------------------------.....C....  11

                                      --CDR3-IMGT----------------------------->                                 
                                      N  W  G  G  L  D  Y  P  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12976  271  ATTGGGGGGGGCTGGACTACCCAGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
D  90.9% (10/11)    IGHD4-4*01   12   .-------------------------------------------------------------------------  12
J  100.0% (50/50)   IGHJ6*02     13   ------------------------..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_125101

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           325     3e-91
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGGG	AGCAATGGCTGG	GGAAGGTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTATGGACGCC	ARGHRGSNGWGRYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	22	2	6	73.3
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	16	5	0	76.2
FR3-IMGT	153	266	114	107	7	0	93.9
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	243	25	6	88.7


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  P  F  S  D  S  G  Y  Y  W  N  W  
                    Query_12977  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGCCCTTCAGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.7% (243/274)  IGHV4-34*01  26   ........T.......T............T................C..T......T.........------....C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  
                    Query_12977  91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAATCCGTCCCTCCAGAGTCGAG  180
V  88.7% (243/274)  IGHV4-34*01  110  T.........C...........G.....G.............T..A....AG.....G............C.........A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  L  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_12977  181  TCACCATATCACTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.7% (243/274)  IGHV4-34*01  200  ...........G...............................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  G  S  N  G  W  G  R  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  I  S  S 
                    Query_12977  271  GAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCATCTCCTCA  359
V  88.7% (243/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.............T................A.....A..G........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_200092

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           341     5e-96
IGHD3-3*01                                                                                            10.3    115  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGCGGAAA	GATTT	C	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGCGGAAAGATTTCCTACTTTGACTAC	ARRGKISYFDY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	230	12	0	95


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  H  G  S  I  S  G  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_12978  4    CCCTGAGACTCTCCTGCACTGTCTCTCATGGCTCCATCAGTGGTTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  95.0% (230/242)  IGHV4-59*01  50   .....TCC...A..............GG.............A...A......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  G  T  M  S  V  D  T  S  K  N  
                    Query_12978  94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGGCACCATGTCAGTAGACACGTCCAAGAACC  183
V  95.0% (230/242)  IGHV4-59*01  140  ............................................................T......A......................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  K  I  S  Y  F  D  Y  
                    Query_12978  184  AGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGACGCGGAAAGATTTCCTACTTTGACTACT  273
V  95.0% (230/242)  IGHV4-59*01  230  ..................G...........................................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (5/5)     IGHD3-3*01   8    ----------------------------------------------------------------------.....---------------  12
J  95.7% (45/47)    IGHJ4*02     2    ----------------------------------------------------------------------------..............  15

                                                                       
                                      W  G  L  G  T  L  V  T  F  S  S  
                    Query_12978  274  GGGGCCTGGGAACCCTGGTCACCTTCTCCTCAG  306
J  95.7% (45/47)    IGHJ4*02     16   ......A................G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_40037

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           338     5e-95
IGHD2-21*01                                                                                           10.3    122  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TCTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTCTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFLQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  V  Y  Y  W  T  W  I  R  Q  R  P  G  K  G 
                    Query_12979  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGTAGTGGTGTTTACTACTGGACCTGGATTCGCCAGCGCCCAGGGAAGGGC  90
V  93.5% (232/248)  IGHV4-31*03  49   ..................A......................C.......G...........G......C.......A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  T  T  Y  Y  N  A  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_12979  91   CTGGAGTGGATTGGGTACATCTATTACGGTGGGACCACTTACTACAACGCGTCCCTCAAGAGTCGGCTTACAATATCAGTGGACACGTCT  180
V  93.5% (232/248)  IGHV4-31*03  139  ...........................A......G...C.........C................AG....C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  L  Q  E 
                    Query_12979  181  AAGAACCAGTTCTCCCTGAAGCTGACCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGGTCTTCTCTATTTCTCCAAGAA  270
V  93.5% (232/248)  IGHV4-31*03  229  .........................G...........................G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD2-21*01  22   ---------------------------------------------------------------------------.....----------  26

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12979  271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_200091

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           336     1e-94
IGHD5-18*01                                                                                           27.6    8e-04
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCTACCGGAA	GTGGATACAACTATGGT	AAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCTACCGGAAGTGGATACAACTATGGTAATAACTGGTTCGACCCG	ARDPTGSGYNYGNNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	230	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  A  S  V  S  H  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_12980  1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGCCTCCGTCAGTCATTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  93.9% (230/245)  IGHV4-59*02  49   ...................C...........G..........AG.........................C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  G  G  I  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_12980  91   TGGATTGGATATATCTACTACGGGGGGATCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  93.9% (230/245)  IGHV4-59*02  139  ........G........T...A.T....G...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  Y 
                    Query_12980  181  CAGTTCTCCCTGAGGCTGAGCTCTCTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGACCCTACCGGAAGTGGATACAACTAT  270
V  93.9% (230/245)  IGHV4-59*02  229  .............A..........G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD5-18*01  1    ----------------------------------------------------------------------------.........G....  14

                                      -------------------->                                  
                                       G  N  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12980  271  GGTAATAACTGGTTCGACCCGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  94.1% (16/17)    IGHD5-18*01  15   ...----------------------------------------------------  17
J  98.0% (48/49)    IGHJ5*02     3    ------..............C..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_200096

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           338     4e-95
IGHD6-19*01                                                                                           12.2    31   
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTTGGGCCCGC	GGCTGG	G	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTTGGGCCCGCGGCTGGGATGGACGTC	ARDVGPAAGMDV	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  V  S  M  R  S  G  G  Y  Y  W  S  W  I  R  Q  R  P  G  K  G  
                    Query_12981  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGTCTCCATGAGGAGTGGTGGATACTACTGGAGCTGGATCCGCCAGCGCCCAGGGAAGGGCC  93
V  93.2% (233/250)  IGHV4-31*01  50   .....TCC...A..................G......C..C........T.........................A..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  G  T  Y  Y  N  P  S  L  K  C  L  V  A  I  S  I  D  T  S  
                    Query_12981  94   TGGAGTGGATTGGGAACATCTATTACAGTGGGGGCACCTACTACAACCCGTCCCTCAAGTGTCTAGTTGCCATATCAATAGACACGTCTA  183
V  93.2% (233/250)  IGHV4-31*01  140  ..............T.................A..........................A........A........G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  Q  F  S  L  R  L  S  C  V  T  A  A  D  T  A  V  Y  Y  R  A  R  D  V  G  P  A  A  G  
                    Query_12981  184  AGAACCAGTTCTCCCTGAGGCTGAGCTGTGTGACTGCCGCGGACACGGCCGTGTATTACCGTGCGAGAGATGTTGGGCCCGCGGCTGGGA  273
V  93.2% (233/250)  IGHV4-31*01  230  ..................A........C...............................T..........--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD6-19*01  13   ----------------------------------------------------------------------------------......--  18
J  95.2% (40/42)    IGHJ6*02     21   -----------------------------------------------------------------------------------------.  21

                                      ------->                                 
                                      M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_12981  274  TGGACGTCTGGGGCCAAGGGGCCACGGTTACCGTCTCCTCA  314
J  95.2% (40/42)    IGHJ6*02     22   ....................A.......C............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_17191

Length=407
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         430     1e-122
IGHD6-6*01                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CACAATTCCTC	TATAGCAGCTCGTCC	CCAATTAGCG	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACAATTCCTCTATAGCAGCTCGTCCCCAATTAGCGACTCCTACTACTACAATATGGACGTC	ATQFLYSSSSPISDSYYYNMDV	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	281	6	0	97.9


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  R  K  G  P  G  Y  T  F  T  N  Y
                    Query_12982    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCCGTAAGGGTCCTGGATACACCTTTACCAACTA  90
V  97.9% (281/287)  IGHV5-10-1*01  6    ..........................................................T........T.........G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  D  Y  S  P
                    Query_12982    91   CTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGAATTGATCCTAGTGACTCTTATACCGACTACAGCCC  180
V  97.9% (281/287)  IGHV5-10-1*01  96   ......................................................G........................A..........  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12982    181  GTCCTTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCATCAGCACTGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.9% (281/287)  IGHV5-10-1*01  186  ..........................................................................................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------------------CDR3-IMGT--------------------------->           
                                          M  Y  Y  C  A  T  Q  F  L  Y  S  S  S  S  P  I  S  D  S  Y  Y  Y  N  M  D  V  W  G  Q  G
                    Query_12982    271  CATGTATTACTGTGCGACACAATTCCTCTATAGCAGCTCGTCCCCAATTAGCGACTCCTACTACTACAATATGGACGTCTGGGGCCAAGG  360
V  97.9% (281/287)  IGHV5-10-1*01  276  .................-------------------------------------------------------------------------  292
                                          M  Y  Y  C  A                                                                           
D  100.0% (15/15)   IGHD6-6*01     4    ----------------------------...............-----------------------------------------------  18
J  94.9% (56/59)    IGHJ6*02       4    -----------------------------------------------------...A..........GG.....................  40

                                                              
                                          T  T  V  T  V  S  S 
                    Query_12982    361  GACCACGGTCACCGTCTCCTCA  382
J  94.9% (56/59)    IGHJ6*02       41   ......................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39867768


Query= Query_200094

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           341     5e-96
IGHD6-13*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGATGGGGG	AGCAGCAGCTGGT	CTGCCCCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATCGATGGGGGAGCAGCAGCTGGTCTGCCCCTCACTTTGACTGC	TRDRWGSSSWSAPHFDC	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	22	8	0	73.3
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	237	19	0	92.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_12983  1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCAACTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.6% (237/256)  IGHV3-49*04  47   ....................................C.....................................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  V  R  S  Y  T  H  G  G  T  T  A  Y  A  A  A  V  K  G  R  F  T  I  S  R  D  
                    Query_12983  91   AGTGGGTTGGCTTCGTGAGAAGTTATACCCATGGTGGGACAACAGCTTACGCCGCGGCTGTGAAAGGCAGATTCACCATCTCAAGGGATG  180
V  92.6% (237/256)  IGHV3-49*04  137  .......A..T...A.T.....CA.AG.TT...............AA.........T............................A....  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  T  S  I  A  Y  L  E  M  D  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  D  R  W  G  S  
                    Query_12983  181  ATTCCACAAGCATCGCCTATCTGGAAATGGACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGCACTAGAGATCGATGGGGGAGCA  270
V  92.6% (237/256)  IGHV3-49*04  227  ......A................C.....A.....................................T........--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (13/13)   IGHD6-13*01  7    --------------------------------------------------------------------------------------....  10

                                      DR3-IMGT-------------------->                                  
                                      S  S  W  S  A  P  H  F  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12983  271  GCAGCTGGTCTGCCCCTCACTTTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD6-13*01  11   .........------------------------------------------------------  19
J  97.8% (44/45)    IGHJ4*02     4    ------------------.........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_40036

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           375     3e-106
IGHD6-6*01                                                                                            19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCACTGGCGC	ATAGCGGCTCGTC	GGGAGGGGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCACTGGCGCATAGCGGCTCGTCGGGAGGGGGGCTTGACCAC	ASLAHSGSSGGGLDH	281	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	67	70	58	9	3	82.9
CDR1-IMGT	68	91	24	24	0	0	100
FR2-IMGT	92	142	51	51	0	0	100
CDR2-IMGT	143	166	24	22	2	0	91.7
FR3-IMGT	167	280	114	107	7	0	93.9
CDR3-IMGT (germline)	281	283	3	3	0	0	100
Total	N/A	N/A	286	265	18	3	92.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  D  V  K  K  P  G     S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y
                    Query_12984  1    GCAGCTGGTGCAGTCTGGAGCTGACGTGAAGAAGCCTGGG---TCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTA  87
V  92.7% (265/286)  IGHV3-30*03  6    ..........G.......G.GA.G....GTCC........AGG...............................................  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D  G  S  V  K  W  Y  A  D
                    Query_12984  88   TGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATCATATGATGGAAGTGTTAAATGGTATGCAGA  177
V  92.7% (265/286)  IGHV3-30*03  96   .........................................................................AA.....AC........  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  L  K  G  R  I  T  I  S  R  D  N  S  K  N  T  L  Y  L  E  M  N  S  L  R  A  E  D  T  A
                    Query_12984  178  CTCCCTGAAGGGCCGAATCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTAGAAATGAACAGCCTGAGAGCTGAGGACACGGC  267
V  92.7% (265/286)  IGHV3-30*03  186  ....G...........T........................................GC...............................  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  S  L  A  H  S  G  S  S  G  G  G  L  D  H  W  G  Q  G  T  L  V  T  V  S  S
                    Query_12984  268  TGTCTATTACTGTGCGTCACTGGCGCATAGCGGCTCGTCGGGAGGGGGGCTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  357
V  92.7% (265/286)  IGHV3-30*03  276  ...G............--------------------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                           
D  92.3% (12/13)    IGHD6-6*01   5    --------------------------.....A.......---------------------------------------------------  17
J  97.6% (41/42)    IGHJ4*02     7    --------------------------------------------------.....T..................................  46

                                        
                                        
                    Query_12984  358  AG  359
J  97.6% (41/42)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_125103

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           315     5e-88
IGHD4-17*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACGTAGGG	ACGGTGATTAC	GGGGCGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAACGTAGGGACGGTGATTACGGGGCGGGCTTTGAGTAC	ARERRDGDYGAGFEY	235	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	18	21	4	4	0	0	100
CDR1-IMGT	22	45	24	22	2	0	91.7
FR2-IMGT	46	96	51	50	1	0	98
CDR2-IMGT	97	120	24	21	3	0	87.5
FR3-IMGT	121	234	114	108	6	0	94.7
CDR3-IMGT (germline)	235	242	8	8	0	0	100
Total	N/A	N/A	225	213	12	0	94.7


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  L  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  F  D
                    Query_12985  18   GTCTGGATTCACCTTAAGTAGATATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAATGGGTGGCAGTTATCTGGTTTGA  107
V  94.7% (213/225)  IGHV3-33*01  72   ...............C.....C............................................G..............A....A...  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  N  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  E  S  K  N  T  L  H  L  Q  M  N
                    Query_12985  108  TGGAAATAATAAATACTATGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACGAGTCCAAGAACACGCTGCATCTGCAAATGAA  197
V  94.7% (213/225)  IGHV3-33*01  162  .....G.................................A..................A.T...............T.............  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------CDR3-IMGT----------------->        
                                        S  L  G  A  E  D  T  A  V  Y  Y  C  A  R  E  R  R  D  G  D  Y  G  A  G  F  E  Y  W  G  Q
                    Query_12985  198  CAGCCTGGGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGAGAACGTAGGGACGGTGATTACGGGGCGGGCTTTGAGTACTGGGGCCA  287
V  94.7% (213/225)  IGHV3-33*01  252  .......A...................G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  90.9% (10/11)    IGHD4-17*01  6    -----------------------------------------------------.......C...--------------------------  16
J  97.7% (43/44)    IGHJ4*02     5    ------------------------------------------------------------------------......C...........  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_12985  288  GGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.7% (43/44)    IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_17198

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           307     1e-85
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACAGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACAGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	219	23	0	90.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_12986  4    CCCTGAGACTCTCCTGTGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAGT  93
V  90.5% (219/242)  IGHV4-34*01  50   .....TCC...A....C..............G...T..................G...........................G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  L  S  L  D  M  S  K  K  
                    Query_12986  94   GGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGCGTCTCCTTATCATTAGACATGTCCAAGAAGC  183
V  90.5% (219/242)  IGHV4-34*01  140  ............................C..................C..A.......A...A..A.....G......C.........C.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  V  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y  
                    Query_12986  184  AGTTCTCCGTGAAGGTGACGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAACAGTAAAGGGGGTTATTACTGTCTACC  273
V  90.5% (219/242)  IGHV4-34*01  230  ........C.....C...GC..........................G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD3-22*01  20   -------------------------------------------------------------------------..........-------  29

                                      ------------------->                                 
                                      Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12986  274  AGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (40/40)   IGHJ6*02     23   -------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_40035

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           315     5e-88
IGHD2-21*02                                                                                           18.0    0.58 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GCGTGGAAGCC	GTGACTGCCATT	AAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGCGTGGAAGCCGTGACTGCCATTAATTACTTTGACTCC	AKGVEAVTAINYFDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	225	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  N  F  G  S  Y  A  M  Y  W  V  R  Q  A  P  A  K  G  L  
                    Query_12987  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCAACTTCGGAAGTTATGCCATGTACTGGGTCCGCCAGGCTCCAGCCAAGGGGCTGG  90
V  90.4% (225/249)  IGHV3-30*18  47   .....................C..............C....A.T..C....G....C.....................G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  L  S  Y  D  E  T  D  K  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  S  
                    Query_12987  91   AGTGGGTGGCATTTCTTTCATATGATGAAACTGATAAGAACTATGCAGACTCCGTGAAGGGGCGATTCACCATCTCCAGAGACACTTCCA  180
V  90.4% (225/249)  IGHV3-30*18  137  ...........G..A.A..........G..G.A....AT......................C......................A.....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  F  L  Q  M  N  S  L  R  P  D  D  T  A  V  Y  F  C  A  K  G  V  E  A  V  T  A  
                    Query_12987  181  AGAACACGCTGTTTCTGCAGATGAACAGCCTGAGACCTGACGACACGGCTGTATATTTCTGTGCGAAAGGCGTGGAAGCCGTGACTGCCA  270
V  90.4% (225/249)  IGHV3-30*18  227  ............A......A...............G....G...........G....A...........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  91.7% (11/12)    IGHD2-21*02  15   --------------------------------------------------------------------------------........T.  24

                                      ---------------->                                  
                                      I  N  Y  F  D  S  W  G  Q  G  T  L  V  V  V  S  S  
                    Query_12987  271  TTAATTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCGTCGTCTCCTCAG  321
D  91.7% (11/12)    IGHD2-21*02  25   ..-------------------------------------------------  26
J  93.5% (43/46)    IGHJ4*02     3    -----..........A......................AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_6891

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12988  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (239/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  P  S  K  N 
                    Query_12988  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACCCGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  ....................................................................A.........A...........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_12988  181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  .............A.............................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12988  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_6892

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           335     4e-94
IGHD2-2*01                                                                                            14.1    8.0  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	GACTAA	CAGCTGC	CA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGACAGACTAACAGCTGCCATGACTAC	ARQTNSCHDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	128	30	26	4	0	86.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	238	226	12	0	95


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  I  F  S  D  P  A  M  H  W  V  R  Q  A  S  G  K  G  L  E  W  V  G  H  I  
                    Query_12989  13   GTGCAGCCTCTGGGTTCATCTTCAGTGACCCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGGAGTGGGTTGGCCATATTA  102
V  95.0% (226/238)  IGHV3-73*01  65   ..................C........G.T......................................................G.....  154
                                         A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  E  W  V  G  R  I  

                                      -------CDR2-IMGT---------><----------------------------------------------------FR3-IMGT---
                                      R  S  E  A  R  S  Y  E  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  V  
                    Query_12989  103  GAAGCGAAGCTAGAAGTTACGAGACAGCATATGCTGCGTCGGTGAAGGGCAGGTTCACCATCTCCAGAGATGATTCAAAGAACACGGTGT  192
V  95.0% (226/238)  IGHV3-73*01  155  .....A......AC.......C........................A........................................C..  244
                                      R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  A  

                                      -------------------------------------------------><----------CDR3-IMGT--------->          
                                      Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  Q  T  N  S  C  H  D  Y  W  G  Q  
                    Query_12989  193  ATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTGTATTATTGTGCTAGACAGACTAACAGCTGCCATGACTACTGGGGCCAGG  282
V  95.0% (226/238)  IGHV3-73*01  245  ..............................................C...A.......--------------------------------  302
                                      Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                                   
D  100.0% (7/7)     IGHD2-2*01   19   ----------------------------------------------------------------.......-------------------  25
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------.................  24

                                                              
                                      G  T  Q  V  T  V  S  S  
                    Query_12989  283  GAACCCAGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     25   ......T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_6893

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           283     1e-78
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGG	ATTACTCTGGTTCGGGGA	AAAGTCAAGGATTTCGGAAAT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGATTACTCTGGTTCGGGGAAAAGTCAAGGATTTCGGAAATTGGCTCGACCCC	ARDRITLVRGKVKDFGNWLDP	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	96	18	0	84.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	216	35	0	86.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  D  G  G  Y  T  W  N  W  I  R  Q  H  P  Q  K  G 
                    Query_12990  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGTGATGGTGGTTATACCTGGAATTGGATCCGCCAGCACCCACAGAAGGGC  90
V  86.1% (216/251)  IGHV4-31*03  49   ...............................G.........CAG.........CTA.....GC..................GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  A  Y  S  G  R  A  D  Y  N  P  S  L  R  S  R  L  S  V  S  K  D  T  S 
                    Query_12990  91   CTGGAGTGGCTTGGGTCCATCGCTTACAGTGGGAGAGCCGATTACAATCCGTCCCTCAGGAGTCGACTTTCCGTGTCGAAAGACACGTCT  180
V  86.1% (216/251)  IGHV4-31*03  139  .........A......A....TA............CA..T.C.....C..........A.......G..A..A.A..AGT..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  A  S  L  N  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  I  T  L  V  R 
                    Query_12990  181  AAGAACCAGGCCTCCCTTAACGTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTATTGTGCGAGAGATCGGATTACTCTGGTTCGG  270
V  86.1% (216/251)  IGHV4-31*03  229  .........TT......G..GC...............................G.....C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  3    ---------------------------------------------------------------------------......A........  17

                                      CDR3-IMGT-------------------------->                                  
                                       G  K  V  K  D  F  G  N  W  L  D  P  W  G  Q  G  T  Q  V  I  V  T  S  
                    Query_12990  271  GGAAAAGTCAAGGATTTCGGAAATTGGCTCGACCCCTGGGGCCAGGGAACCCAGGTCATCGTCACCTCAG  340
D  94.4% (17/18)    IGHD3-10*01  18   ...-------------------------------------------------------------------  20
J  91.3% (42/46)    IGHJ5*02     6    ------------------------...T........................T.....C....T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_6894

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	276	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_12991  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  96.5% (276/286)  IGHV5-51*01  6    ..................................................................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_12991  91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  96.5% (276/286)  IGHV5-51*01  96   ......................A.......G.............G..........................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  S  T  L  K  A  S  D  T  A
                    Query_12991  181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAGCACCGCCTACCTGCAGTGGAGCACCCTGAAGGCCTCGGACACCGC  270
V  96.5% (276/286)  IGHV5-51*01  186  ....................C...................A...........................G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12991  271  CGTGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  96.5% (276/286)  IGHV5-51*01  276  .A..............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_6895

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           360     1e-101
IGHD4-4*01                                                                                            12.2    30    
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-4*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	CTACAG	GTTACGGGG	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTACAGGTTACGGGGGGTATGGACGTC	ARGLQVTGGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	237	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  N  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12992  1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (237/244)  IGHV4-59*01  49   ...................C...................................G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  T  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12992  91   TGGATTGGGTATATCCATTACAGTGGGACCACCAGCTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.1% (237/244)  IGHV4-59*01  139  ...............T............G.....A.......................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Q  V  T  G  G  M  D 
                    Query_12992  181  CACTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCTACAGGTTACGGGGGGTATGGAC  270
V  97.1% (237/244)  IGHV4-59*01  229  ..G................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD4-4*01   4    ------------------------------------------------------------------......------------------  9
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------.........  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_12992  271  GTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  306
J  100.0% (45/45)   IGHJ6*02     27   ....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_6896

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           318     6e-89
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCCGCCGC	TTCGGGGA	CTTGACCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCCGCCGCTTCGGGGACTTGACCCTTGACTAC	ARDGRRFGDLTLDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	14	7	0	66.7
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	225	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  L  S  V  S  S  N  Y  M  S  W  F  R  Q  P  P  G  K  G  L  
                    Query_12993  1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGGCTCAGCGTCAGTAGCAACTACATGAGCTGGTTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  91.1% (225/247)  IGHV3-53*01  47   ........................C.......T...C.........................G........G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  L  Y  S  G  G  V  T  F  F  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  R  
                    Query_12993  91   AGTGGGTCTCAGTTCTTTATAGTGGAGGAGTCACGTTCTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGATTCCAGGA  180
V  91.1% (225/247)  IGHV3-53*01  137  ..............A.......C..T..TAG...A.A..A........................................A......A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  F  C  A  R  D  G  R  R  F  G  D  L  
                    Query_12993  181  ACACATTGTATCTTCAAATGAACAACCTCAGAGCCGAGGACACGGCCGTCTATTTCTGTGCGAGAGATGGCCGCCGCTTCGGGGACTTGA  270
V  91.1% (225/247)  IGHV3-53*01  227  ....GC..................G...G....................G....A............-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-10*01  13   -----------------------------------------------------------------------------........-----  20

                                      ---------->                                  
                                      T  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12993  271  CCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (42/42)   IGHJ4*02     7    ---..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_223162

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           350     8e-99
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCT	GTGGCTGG	AAAAGCAGTCCG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTGTGGCTGGAAAAGCAGTCCGTGATGCTTTTGATATC	ARSVAGKAVRDAFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12994  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-30*04  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  H  K  Y  Y  A  D  S  V  K  G  R  L  T  V  S  R  D  N  S  
                    Query_12994  91   AGTGGGTGGCAGTTATATCATATGATGGAAGTCATAAATACTATGCAGACTCCGTGAAGGGCCGACTCACCGTCTCCAGAGACAATTCCG  180
V  95.2% (236/248)  IGHV3-30*04  137  ................................A..........C.....................T.....A.................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  T  L  Y  V  Q  V  N  S  L  R  P  E  D  T  A  M  Y  Y  C  A  R  S  V  A  G  K  A  V  
                    Query_12994  181  AGAACACGCTCTATGTGCAAGTGAACAGCCTGAGACCTGAGGACACGGCTATGTATTACTGTGCGAGATCTGTGGCTGGAAAAGCAGTCC  270
V  95.2% (236/248)  IGHV3-30*04  227  ..........G...C.....A..............G..............G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18

                                      ---------------->                                
                                      R  D  A  F  D  I  W  G  R  G  T  V  V  I  V  S  S
                    Query_12994  271  GTGATGCTTTTGATATCTGGGGCCGAGGGACAGTGGTCATCGTGTCTTC  319
J  91.7% (44/48)    IGHJ3*02     1    -.......................A.......A......C...C.....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_6898

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            377     1e-106
IGHD5-18*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCACAGCAAAG	ACAGCTATGGTTA	ACTCGGGACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCACAGCAAAGACAGCTATGGTTAACTCGGGACGACTACTACAATGCTATGGACGTC	ARSQQRQLWLTRDDYYNAMDV	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	265	24	0	91.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  L  S  D  H
                    Query_12995  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGCGGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACGTTAAGCGACCA  90
V  91.7% (265/289)  IGHV1-2*04   6    ..................G.........AA................................................C..C.C..G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  K  T  G  G  T  N  Y  A  Q
                    Query_12995  91   TTTTATACACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAAGACAGGCGGCACAAACTATGCGCA  180
V  91.7% (265/289)  IGHV1-2*04   96   C.A...G...........................................................C.GT..T..............A..  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  L  T  L  T  R  D  T  S  I  T  T  A  Y  M  E  L  R  G  L  R  S  D  D  T  A
                    Query_12995  181  GAAGTTTCAGGGCTGGCTCACCCTGACCAGGGACACGTCCATCACCACAGCCTACATGGAGCTGCGTGGCCTGAGATCTGACGACACCGC  270
V  91.7% (265/289)  IGHV1-2*04   186  ................G.....A.....................G...................A.CA.G.................G..  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        V  Y  Y  C  A  R  S  Q  Q  R  Q  L  W  L  T  R  D  D  Y  Y  N  A  M  D  V  W  G  Q  G  T
                    Query_12995  271  CGTGTATTACTGTGCGAGATCACAGCAAAGACAGCTATGGTTAACTCGGGACGACTACTACAATGCTATGGACGTCTGGGGCCAAGGGAC  360
V  91.7% (265/289)  IGHV1-2*04   276  ...................-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (13/13)   IGHD5-18*01  7    ------------------------------.............-----------------------------------------------  19
J  94.6% (53/56)    IGHJ6*02     7    -----------------------------------------------------........T.C.G........................  43

                                                         
                                        T  V  T  V  S  S 
                    Query_12995  361  CACGGTCACCGTCTCCTCA  379
J  94.6% (53/56)    IGHJ6*02     44   ...................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_20105

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           288     5e-80
IGHD3-10*01                                                                                           41.1    7e-08
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAC	TATTATTATGGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTATTATTATGGTTCGGGGAGTTATTTTGACTTC	ARGHYYYGSGSYFDF	252	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	35	33	21	12	0	63.6
CDR1-IMGT	36	65	30	24	6	0	80
FR2-IMGT	66	116	51	44	7	0	86.3
CDR2-IMGT	117	137	21	21	0	0	100
FR3-IMGT	138	251	114	103	11	0	90.4
CDR3-IMGT (germline)	252	258	7	7	0	0	100
Total	N/A	N/A	256	220	36	0	85.9


Alignments

                                      <-----------FR1-IMGT------------><----------CDR1-IMGT---------><--------------------FR2-IM
                                       S  L  R  L  S  C  T  V  T  F  S  R  G  S  I  S  S  G  G  F  H  W  D  W  S  R  P  H  P  G 
                    Query_12996  3    TCCCTGAGACTCTCCTGTACTGTCACTTTCTCTCGTGGCTCCATTAGCAGTGGCGGGTTCCACTGGGACTGGAGCCGCCCGCACCCAGGG  92
V  85.9% (220/256)  IGHV4-31*03  43   ..A.A..CC..G...CTC..CTG....G.....G..........C........T..T.A.T.....AG.....T.....A..........  132
                                       S  Q  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       E  G  L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  V  D 
                    Query_12996  93   GAGGGGCTGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCCGGAGTCGACTTACCATATCAGTGGAC  182
V  85.9% (220/256)  IGHV4-31*03  133  A....C...............T.........................................AA.......G.............A...  222
                                       K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-----------------CDR
                                       T  S  K  N  Q  L  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  Y  Y  Y 
                    Query_12996  183  ACGTCTAAGAATCAATTGTCCCTGAGGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTATTGTGCGAGAGGCCACTATTATTAT  272
V  85.9% (220/256)  IGHV4-31*03  223  ...........C..G..C.......A......C..........................G.....C..........--------------  298
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  95.8% (23/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------------.....C...  10

                                      3-IMGT----------------->                                  
                                       G  S  G  S  Y  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12996  273  GGTTCGGGGAGTTATTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  95.8% (23/24)    IGHD3-10*01  11   ...............-------------------------------------------  25
J  97.7% (42/43)    IGHJ4*02     6    ---------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_156549

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           358     4e-101
IGHD3-9*01                                                                                            43.0    2e-08 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	GCCCCGC	ATTACGATATTTTGACTGGTTA	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGCCCCGCATTACGATATTTTGACTGGTTATGACTAC	ARAPHYDILTGYDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	236	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  H  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_12997  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTACCACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.1% (236/243)  IGHV4-59*08  49   ...........................................G....T.........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_12997  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.1% (236/243)  IGHV4-59*08  139  .........................................C................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       P  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  H  Y  D  I  L  T  G 
                    Query_12997  181  CCTTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGCCCCGCATTACGATATTTTGACTGGT  270
V  97.1% (236/243)  IGHV4-59*08  229  .AG..........................C.............................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (22/22)   IGHD3-9*01   3    ----------------------------------------------------------------------....................  22

                                      -------->                                  
                                       Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_12997  271  TATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
D  100.0% (22/22)   IGHD3-9*01   23   ..-----------------------------------------  24
J  100.0% (41/41)   IGHJ4*02     8    --.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_223169

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           420     7e-120
IGHD2-2*01                                                                                            21.8    0.046 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAGTAGTGAA	TACCAGCTGCT	GTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCC	ARSSSEYQLLFWFDP	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_12998  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCAGCTA  90
V  96.5% (279/289)  IGHV5-51*03  6    .................................................................G............C...........  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_12998  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATATATCCTGGTGACTCTGATGCCAGATATAGTCC  180
V  96.5% (279/289)  IGHV5-51*03  96   .........................................................C..................A.......C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  K  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_12998  181  GTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTCAAGGCCTCGGACACCGC  270
V  96.5% (279/289)  IGHV5-51*03  186  .......C.....................C..........................................G.................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  S  S  E  Y  Q  L  L  F  W  F  D  P  W  G  Q  G  T  L  V  T  V  T  S
                    Query_12998  271  CATGTATTATTGTGCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCACCTC  360
V  96.5% (279/289)  IGHV5-51*03  276  .........C.........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (11/11)   IGHD2-2*01   16   -------------------------------...........------------------------------------------------  26
J  97.9% (46/47)    IGHJ5*02     5    ---------------------------------------------........................................T....  49

                                        
                                        
                    Query_12998  361  AG  362
J  97.9% (46/47)    IGHJ5*02     50   ..  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_223168

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           357     1e-100
IGHD6-19*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	TAGAGGGTTGGGCCCA	TATAGTAGTGTCTGGT	TCCCGTG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGATAGAGGGTTGGGCCCATATAGTAGTGTCTGGTTCCCGTGTGACTAC	AGDRGLGPYSSVWFPCDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_12999  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-30*03  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_12999  91   AGTGGGTGGCAGTTATATCATATGATGGAAGTAAGAAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.6% (239/250)  IGHV3-30*03  137  ..................................T.....C.................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  D  T  L  F  L  Q  I  N  S  L  R  A  E  D  K  A  V  Y  Y  C  A  G  D  R  G  L  G  P  Y  
                    Query_12999  181  AAGACACGCTGTTCCTGCAAATCAACAGCCTGAGAGCTGAGGACAAGGCTGTGTATTACTGTGCGGGAGATAGAGGGTTGGGCCCATATA  270
V  95.6% (239/250)  IGHV3-30*03  227  .GA.........AT........G......................C...................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD6-19*01  4    --------------------------------------------------------------------------------------....  7

                                      IMGT--------------------->                                  
                                      S  S  V  W  F  P  C  D  Y  W  G  Q  G  N  L  V  S  V  S  S  
                    Query_12999  271  GTAGTGTCTGGTTCCCGTGTGACTACTGGGGCCAGGGAAACTTGGTCTCCGTCTCCTCAG  330
D  87.5% (14/16)    IGHD6-19*01  8    .C....G.....------------------------------------------------  19
J  92.7% (38/41)    IGHJ4*02     8    -------------------....................C.C.....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_20104

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     9e-100
IGHD6-13*01                                                                                           21.8    0.041 
IGHJ3*01                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  L  S  G  G  S  I  S  S  G  G  F  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_13000  1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGGCTCCATCAGCAGTGGTGGTTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.6% (237/248)  IGHV4-31*03  49   .....................G..............................A........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_13000  91   CTGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCT  180
V  95.6% (237/248)  IGHV4-31*03  139  .....................T..................A.................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V 
                    Query_13000  181  AAGAACCAATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGGGGCGCAGCTGGTACTGATGTA  270
V  95.6% (237/248)  IGHV4-31*03  229  ........G..........A.....GC...............................A.........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (11/11)   IGHD6-13*01  11   ------------------------------------------------------------------------...........-------  21

                                      ----------------->                                  
                                       G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13000  271  GGCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  98.0% (48/49)    IGHJ3*01     2    ---.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_320051

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGGGCGGTAT	CTATGATAGTAATTTTTATTAC	GACTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGGGCGGTATCTATGATAGTAATTTTTATTACGACTTT	ARGGGIYDSNFYYDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	221	21	0	91.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  P  G  S  S  I  S  P  Y  Y  W  S  W  I  R  Q  T  P  G  K  E  L  D 
                    Query_13001  1    ACCCTGTCCCTCACCTGCAGTGTCCCTGGTAGTTCCATCAGTCCTTATTACTGGAGCTGGATCCGGCAGACCCCAGGGAAGGAACTGGAT  90
V  91.3% (221/242)  IGHV4-59*01  49   ...................C....T.....G.C.........AG...C.....................C............G......G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  A  L  K  S  R  V  S  L  S  V  D  T  S  K  H 
                    Query_13001  91   TGGATTGGATACATCTACTACACTGGGAGCACCAACTACAATCCCGCCCTCAAGAGTCGAGTCAGCCTATCAGTAGACACGTCCAAGCAC  180
V  91.3% (221/242)  IGHV4-59*01  139  ........G..T.....T....G..................C...T..................C.A....................A..  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  I  Y  D  S  N  F 
                    Query_13001  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGGGGGGGCGGTATCTATGATAGTAATTTT  270
V  91.3% (221/242)  IGHV4-59*01  229  ...................G...........................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  86.4% (19/22)    IGHD3-22*01  7    --------------------------------------------------------------------------...........G.GG.  22

                                      ----------->                                  
                                       Y  Y  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_13001  271  TATTACGACTTTTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  316
D  86.4% (19/22)    IGHD3-22*01  23   ......----------------------------------------  28
J  97.1% (33/34)    IGHJ4*02     15   ------------............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_94167

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13002  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  V  S  V  D  T  S  K  S 
                    Query_13002  91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCGTTTCAGTAGACACGTCCAAGAGC  180
V  91.4% (224/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T....A.A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  I  S  L  S  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_13002  181  CAGATCTCCCTGAGCCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  91.4% (224/245)  IGHV4-59*01  229  ...T.........AG........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_13002  271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_20108

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           341     5e-96
IGHD3-10*01                                                                                           37.2    1e-06
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCACTC	CTATGGATCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACTCCTATGGATCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_13003  1    ACCCTGTCCCTCACCTGCGCCGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  93.6% (234/250)  IGHV4-31*03  49   ..................A.T.........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  N  G  T  T  Y  Y  N  P  S  L  K  S  R  I  T  M  S  V  D  T  S 
                    Query_13003  91   CTGGAGTGGATTGGGTACATCTATTACAATGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAATCACCATGTCAGTGGACACGTCT  180
V  93.6% (234/250)  IGHV4-31*03  139  ............................G.....G...............................G.T.....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  G  H  S  Y  G  S  G 
                    Query_13003  181  AAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTTTTACTGCGCGAGAGGTCACTCCTATGGATCGGGG  270
V  93.6% (234/250)  IGHV4-31*03  229  .....................C...G...........................G.A......T.......--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.5% (21/22)    IGHD3-10*01  7    -----------------------------------------------------------------------------......T......  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13003  271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  95.5% (21/22)    IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_7086

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           374     9e-106
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCGAGG	GGTATGGTGGAATCCACTAC	ATTTCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCGAGGGGTATGGTGGAATCCACTACATTTCATACTACTTTGACTAC	ARGEGYGGIHYISYYFDY	292	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	46	5	0	90.2
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	102	12	0	89.5
CDR3-IMGT (germline)	292	296	5	5	0	0	100
Total	N/A	N/A	293	266	27	0	90.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  P  E  V  K  E  P  G  A  S  V  K  V  S  C  K  A  S  G  F  S  L  T 
                    Query_13004  4    CAGGTTCAGCTGGTGCAGTCTGGACCTGAGGTGAAGGAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTTCAGCTTGACC  93
V  90.8% (266/293)  IGHV1-18*01  1    ........................G...........A..........................................A..C...T...  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  L  T  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  S  Y  D  G  N  T  D  Y 
                    Query_13004  94   AACTATGGTCTCACCTGGGTGCGTCAGGCCCCTGGACAAGGGCTTGAGTGGCTGGGGTGGATCAGCTCTTATGACGGTAACACAGACTAT  183
V  90.8% (266/293)  IGHV1-18*01  91   .G.......A...G.........A...........................A....A.........G....CA.T.........A.....  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  L  Q  G  R  V  I  M  T  R  D  I  S  T  N  T  A  Y  M  E  L  R  S  L  E  S  D  D 
                    Query_13004  184  GCACAGAAACTCCAGGGCAGAGTTATTATGACCAGAGACATATCCACGAACACAGCCTACATGGAACTGAGGAGCCTGGAATCTGACGAC  273
V  90.8% (266/293)  IGHV1-18*01  181  ........G..............C.CC.......C.....C........G...............G............AG..........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  R  G  E  G  Y  G  G  I  H  Y  I  S  Y  Y  F  D  Y  W  G  Q  G  T  L 
                    Query_13004  274  ACGGCCGTATATTACTGTGCGAGGGGCGAGGGGTATGGTGGAATCCACTACATTTCATACTACTTTGACTACTGGGGCCAGGGAACCCTG  363
V  90.8% (266/293)  IGHV1-18*01  271  ........G..............-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  80.0% (16/20)    IGHD1-26*01  1    -------------------------------.....A....G.G.T.....---------------------------------------  20
J  100.0% (48/48)   IGHJ4*02     1    ----------------------------------------------------------................................  32

                                                      
                                       V  T  V  S  S  
                    Query_13004  364  GTCACCGTCTCCTCAG  379
J  100.0% (48/48)   IGHJ4*02     33   ................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_320059

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           371     8e-105
IGHD4-17*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GGTCATC	GACTACGGTGACTAC	GTCG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGAGGTCATCGACTACGGTGACTACGTCGACTTCTACTATTACGGAATGGACGTC	ATEVIDYGDYVDFYYYGMDV	290	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	63	7	0	90
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	175	30	25	5	0	83.3
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	297	8	7	1	0	87.5
Total	N/A	N/A	297	267	30	0	89.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  K  P  G  E  S  L  R  V  S  C  A  A  S  G  L  S  F  K  N  A
                    Query_13005  1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGGTTAAGCCTGGAGAGTCCCTCAGAGTCTCCTGTGCAGCCTCTGGACTCAGCTTCAAAAACGC  90
V  89.9% (267/297)  IGHV3-15*01  6    ..........G.......G...........A........G.G......T...C....................T...CT....GT.....  95
                                        Q  L  V  E  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A

                                      ---><--------------------FR2-IMGT---------------------><----------CDR2-IMGT---------><----
                                        W  M  T  W  V  R  Q  S  P  G  K  G  L  E  W  V  G  R  I  R  S  R  T  D  G  G  T  A  D  Y
                    Query_13005  91   CTGGATGACCTGGGTCCGCCAGTCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGCATTAGAAGCAGAACCGATGGTGGGACGGCAGACTA  180
V  89.9% (267/297)  IGHV3-15*01  96   ........G.............G...............................T....A.....A...T...........AA.......  185
                                        W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y

                                      ------------------------------------------------FR3-IMGT----------------------------------
                                        A  A  P  V  K  G  R  F  I  I  S  R  D  E  S  K  T  T  L  Y  L  Q  M  N  S  L  K  T  E  D
                    Query_13005  181  CGCTGCACCCGTGAAAGGCAGATTCATCATCTCAAGAGATGAATCGAAGACCACCCTTTATCTTCAAATGAACAGCCTGAAAACCGAGGA  270
V  89.9% (267/297)  IGHV3-15*01  186  ..........................C...............T..A..A.A...G..G.....G..........................  275
                                        A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D

                                      ------------------><-------------------------CDR3-IMGT------------------------>           
                                        T  A  V  Y  Y  C  A  T  E  V  I  D  Y  G  D  Y  V  D  F  Y  Y  Y  G  M  D  V  W  G  Q  G
                    Query_13005  271  CACAGCCGTCTATTACTGTGCCACAGAGGTCATCGACTACGGTGACTACGTCGACTTCTACTATTACGGAATGGACGTCTGGGGCCAAGG  360
V  89.9% (267/297)  IGHV3-15*01  276  .........G.........A.......---------------------------------------------------------------  302
                                        T  A  V  Y  Y  C  T  T                                                                  
D  100.0% (15/15)   IGHD4-17*01  2    ----------------------------------...............-----------------------------------------  16
J  89.8% (53/59)    IGHJ6*02     4    -----------------------------------------------------...A......C.....T....................  40

                                                            
                                        S  S  V  T  V  S  S 
                    Query_13005  361  GAGTTCGGTCACCGTCTCCTCA  382
J  89.8% (53/59)    IGHJ6*02     41   ..CCA.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_7080

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*05                                                                                           316     2e-88
IGHD4-17*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*05	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGTGTTGG	CTACGGTG	GTTCCCCGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTGTTGGCTACGGTGGTTCCCCGGGCTTTGACTAC	ARGGVGYGGSPGFDY	230	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	23	1	0	95.8
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	19	5	0	79.2
FR3-IMGT	116	229	114	110	4	0	96.5
CDR3-IMGT (germline)	230	236	7	7	0	0	100
Total	N/A	N/A	224	213	11	0	95.1


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  L  Y  D
                    Query_13006  13   GTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCACTTATATTATATGA  102
V  95.1% (213/224)  IGHV3-33*05  72   .....................C......................................................G......C......  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  D  N  E  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  D  T  L  Y  L  Q  M  N
                    Query_13006  103  TGGAGATAATGAGTTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGGACACGCTGTATCTGCAAATGAA  192
V  95.1% (213/224)  IGHV3-33*05  162  ....AG....A.A.A....................................................A......................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------CDR3-IMGT----------------->        
                                        S  L  R  V  E  D  T  A  L  Y  Y  C  A  R  G  G  V  G  Y  G  G  S  P  G  F  D  Y  W  G  Q
                    Query_13006  193  CAGCCTGAGAGTCGAGGACACGGCTCTGTATTACTGTGCGAGAGGGGGTGTTGGCTACGGTGGTTCCCCGGGCTTTGACTACTGGGGCCA  282
V  95.1% (213/224)  IGHV3-33*05  252  ...........C.............G..................----------------------------------------------  295
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (8/8)     IGHD4-17*01  4    ------------------------------------------------------........----------------------------  11
J  100.0% (44/44)   IGHJ4*02     5    ------------------------------------------------------------------------..................  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_13006  283  GGGAACCCTGGTCACCGTCTCCTCAG  308
J  100.0% (44/44)   IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_320058

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           313     1e-87
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGGCGGTAT	CTATGATAGTAATTTTTATTAC	GACTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGGCGGTATCTATGATAGTAATTTTTATTACGACTTT	ARGAVSMIVIFITT	238	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	221	21	0	91.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  P  G  S  S  I  S  P  Y  Y  W  S  W  I  R  Q  T  P  G  K  E  L  D 
                    Query_13007  1    ACCCTGTCCCTCACCTGCAGTGTCCCTGGTAGTTCCATCAGTCCTTATTACTGGAGCTGGATCCGGCAGACCCCAGGGAAGGAACTGGAT  90
V  91.3% (221/242)  IGHV4-59*01  49   ...................C....T.....G.C.........AG...C.....................C............G......G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  T  N  Y  N  P  A  L  K  S  R  V  S  L  S  V  D  T  S  K  H 
                    Query_13007  91   TGGATTGGATACATCTACTACACTGGGAGCACCAACTACAATCCCGCCCTCAAGAGTCGAGTCAGCCTATCAGTAGACACGTCCAAGCAC  180
V  91.3% (221/242)  IGHV4-59*01  139  ........G..T.....T....G..................C...T..................C.A....................A..  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  V  S  M  I  V  I  F 
                    Query_13007  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGGGGGGCGGTATCTATGATAGTAATTTTT  270
V  91.3% (221/242)  IGHV4-59*01  229  ...................G...........................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  86.4% (19/22)    IGHD3-22*01  7    -------------------------------------------------------------------------...........G.GG..  23

                                      ---------->                                  
                                       I  T  T  F  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_13007  271  ATTACGACTTTTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  315
D  86.4% (19/22)    IGHD3-22*01  24   .....----------------------------------------  28
J  97.1% (33/34)    IGHJ4*02     15   -----------............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_268168

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           296     2e-82
IGHD2-8*01                                                                                            21.8    0.040
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-8*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCAA	AGTTAGGCGGACC	ATATTGTACTA	CTATAAATTGTAAT	CCCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGTTAGGCGGACCATATTGTACTACTATAAATTGTAATCCC	AKLGGPYCTTINCNP	237	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	20	4	0	83.3
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	16	8	0	66.7
FR3-IMGT	123	236	114	108	6	0	94.7
CDR3-IMGT (germline)	237	240	4	4	0	0	100
Total	N/A	N/A	229	209	20	0	91.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  A  F  S  S  Y  W  M  H  W  V  R  Q  D  P  G  K  G  L  V  W  V  S  R  I 
                    Query_13008  12   TGTGCAGCCTCTGGTTTCGCCTTCAGTTCCTACTGGATGCACTGGGTCCGCCAAGATCCAGGGAAGGGGCTGGTGTGGGTCTCGCGTATT  101
V  91.3% (209/229)  IGHV3-74*01  64   ..............A...A........AG..........................C...........................A......  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       N  P  D  G  R  V  Q  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  M  Y  L 
                    Query_13008  102  AATCCTGATGGACGTGTCCAAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACGATGTATCTG  191
V  91.3% (209/229)  IGHV3-74*01  154  ...AG......GA..AG.AC..G..........................................................C........  243
                                       N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------CDR3-IMGT----------------->
                                       Q  M  N  G  L  R  A  E  D  T  S  V  Y  Y  C  A  K  L  G  G  P  Y  C  T  T  I  N  C  N  P 
                    Query_13008  192  CAAATGAATGGTCTGAGAGCCGAGGACACGTCTGTGTACTACTGTGCAAAGTTAGGCGGACCATATTGTACTACTATAAATTGTAATCCC  281
V  91.3% (209/229)  IGHV3-74*01  244  ........CA....................G.......T..........-----------------------------------------  292
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                           
D  100.0% (11/11)   IGHD2-8*01   4    --------------------------------------------------------------...........-----------------  14
J  100.0% (37/37)   IGHJ5*02     15   ---------------------------------------------------------------------------------------...  17

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13008  282  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (37/37)   IGHJ5*02     18   ..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_137796

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         392     2e-111
IGHD6-19*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCTTAAGGTCAATCGCGTC	CAGTGGCTGG	GCGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCA	ARHPLRSIASSGWAS	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	75	72	67	5	0	93.1
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	103	11	0	90.4
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  T  F  T  N 
                    Query_13009    4    GTGCAGCTGGTGCAGTCTGGAGGAGAGGTGAAGAAGCCCGGGGAGTCTTTGAGGATTTCCTGTAAGGCTTCTGGATACACCTTTACCAAC  93
V  93.1% (271/291)  IGHV5-10-1*01  4    ......................C.........A...............C.......C..........G...........G........G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  W  I  S  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  S  Y  S 
                    Query_13009    94   TACTGGATCAGCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGACCCTAGTGACTCTTATACCAGCTACAGT  183
V  93.1% (271/291)  IGHV5-10-1*01  94   ........................A.....................................T...................A......C  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  D  G  N  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  M  A  S  D  T 
                    Query_13009    184  CCGTCCTTCGACGGCAACGTCACCATCTCAGTTGACAAGTCCATCAGTACTGCCTATTTGCAGTGGAGCAGCCTGATGGCCTCGGACACC  273
V  93.1% (271/291)  IGHV5-10-1*01  184  .........C.A...C...............C...............C........CC..................A.............  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><-----------------CDR3-IMGT----------------->                              
                                         A  M  Y  Y  C  A  R  H  P  L  R  S  I  A  S  S  G  W  A  S  W  G  Q  G  T  L  V  T  V  S 
                    Query_13009    274  GCCATGTATTATTGTGCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCATGGGGCCAGGGAACCCTGGTCACCGTCTCC  363
V  93.1% (271/291)  IGHV5-10-1*01  274  ...........C.........---------------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                      
D  100.0% (10/10)   IGHD6-19*01    9    --------------------------------------------..........------------------------------------  18
J  100.0% (34/34)   IGHJ4*02       15   ------------------------------------------------------------..............................  44

                                            
                                         S  
                    Query_13009    364  TCAG  367
J  100.0% (34/34)   IGHJ4*02       45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_10874

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           353     9e-100
IGHD3-10*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAA	ATGGTTCGGG	ACTGGTGGGATAGTGAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAAATGGTTCGGGACTGGTGGGATAGTGAATTTGACTAC	AKDKMVRDWWDSEFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  I  W  V  R  Q  A  P  G  K  G  L  
                    Query_13010  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTTAGCAACTATGCCATGATCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-23*01  47   ............................T................G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  S  A  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13010  91   AGTGGGTCTCAGGTATTAGTGGTAGTGGTGGGAGCGCATATTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  95.2% (238/250)  IGHV3-23*01  137  ............C..................T...A....C............................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  A  D  T  A  V  Y  C  C  A  K  D  K  M  V  R  D  W  
                    Query_13010  181  AAAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGCGGACACGGCCGTCTATTGCTGTGCGAAAGATAAAATGGTTCGGGACTGGT  270
V  95.2% (238/250)  IGHV3-23*01  227  .G.....................................A............A....A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-10*01  9    --------------------------------------------------------------------------..........------  18

                                      T------------------>                                  
                                      W  D  S  E  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13010  271  GGGATAGTGAATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (43/43)   IGHJ4*02     6    -----------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_10875

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           408     4e-116
IGHD1-26*01                                                                                           10.3    133   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTTTTTTC	TGGGA	CCTTCTCCCTTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTTTTTCTGGGACCTTCTCCCTTCTTGACTAC	ARVFSGTFSLLDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	275	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  T  A  F  G  Y  G  F  T  S  Y
                    Query_13011  1    GCAGCTGGTGCAGTCTGGGGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTACGGCTTTTGGATACGGCTTTACCAGTTA  90
V  95.2% (275/289)  IGHV5-51*03  6    ..................A...........................................A..G..C.......A..........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  R  D  G  E  T  R  Y  S  P
                    Query_13011  91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTCGTGACGGTGAAACCAGATACAGCCC  180
V  95.2% (275/289)  IGHV5-51*03  96   C...............................................................G.....TC...T..............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_13011  181  GTCCTTCCAAGGCCAGGTCAGCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  95.2% (275/289)  IGHV5-51*03  186  ....................C....................................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                
                                        M  Y  Y  C  A  R  V  F  S  G  T  F  S  L  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13011  271  CATGTATTATTGTGCGAGAGTTTTTTCTGGGACCTTCTCCCTTCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  354
V  95.2% (275/289)  IGHV5-51*03  276  .........C.........-----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                  
D  100.0% (5/5)     IGHD1-26*01  8    ---------------------------.....----------------------------------------------------  12
J  100.0% (40/40)   IGHJ4*02     7    --------------------------------------------........................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_10872

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           392     2e-111
IGHD3-9*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACACCATACGCCGGGT	TTACGATCTTTTGACTGG	N/A	TACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACACCATACGCCGGGTTTACGATCTTTTGACTGGTACCTTGACTCC	ARGHHTPGLRSFDWYLDS	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  R  Y 
                    Query_13012  2    CAGCTGGTGCAGTCTGGAGGTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACGTTTAGCAGATAT  91
V  93.4% (270/289)  IGHV1-18*01  7    ...................C...G.....................................................C....C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  K  N  G  N  T  N  Y  A  Q 
                    Query_13012  92   GGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTAAAAATGGTAACACAAATTACGCACAG  181
V  93.4% (270/289)  IGHV1-18*01  97   ........C....................................................C.T.C..............C..T......  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  V  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  F  D  D  T  A 
                    Query_13012  182  AGGGTCCAGGGAAGAGTCACCATGACGACAGACACATCCACGAGTACAGCCTACATGGAGCTGCGGAGCCTGAGATTTGACGACACGGCC  271
V  93.4% (270/289)  IGHV1-18*01  187  .A.C.......C..............C.................C..................A............C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  F  C  A  R  G  H  H  T  P  G  L  R  S  F  D  W  Y  L  D  S  W  G  Q  G  T  L  V  T 
                    Query_13012  272  GTGTATTTCTGTGCGAGAGGACACCATACGCCGGGTTTACGATCTTTTGACTGGTACCTTGACTCCTGGGGCCAGGGAACCCTGGTCACC  361
V  93.4% (270/289)  IGHV1-18*01  277  .......A...........-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  94.4% (17/18)    IGHD3-9*01   4    ------------------------------------.......A..........------------------------------------  21
J  95.7% (44/46)    IGHJ4*02     3    ------------------------------------------------------...T......A.........................  38

                                                
                                       V  S  S  
                    Query_13012  362  GTCTCCTCAG  371
J  95.7% (44/46)    IGHJ4*02     39   ..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_10870

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            367     6e-104
IGHD2-2*01                                                                                            10.3    133   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAATAGGAATTCTTG	CCAGC	ACCCCCCTTG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATAATAGGAATTCTTGCCAGCACCCCCCTTGCGGTATGGACGTC	ARDNRNSCQHPPCGMDV	269	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	76	30	27	3	0	90
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	154	27	25	2	0	92.6
FR3-IMGT	155	268	114	102	12	0	89.5
CDR3-IMGT (germline)	269	276	8	8	0	0	100
Total	N/A	N/A	275	255	20	0	92.7


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  D  S  A  T  W  N  W  I  R 
                    Query_13013  2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGCGACAGTGTCTCTAGCGACAGTGCTACTTGGAACTGGATCAGG  91
V  92.7% (255/275)  IGHV6-1*01   31   ........G...T.G................................G...............A........G.................  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  E  W  Y  N  D  S  A  M  S  V  K  G  R 
                    Query_13013  92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCTGAGTGGTATAATGATTCTGCAATGTCTGTGAAAGGTCGA  181
V  92.7% (255/275)  IGHV6-1*01   121  ..................................................CA...............A....G.A.........A.....  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       V  T  I  N  P  D  T  S  K  Q  Q  F  S  L  H  L  I  S  V  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_13013  182  GTAACCATCAACCCAGACACATCCAAGCAGCAGTTCTCCCTGCATCTGATTTCTGTGACTCCCGAGGACACAGCTGTGTATTATTGTGCA  271
V  92.7% (255/275)  IGHV6-1*01   211  A..........................A.C..............G....AC....................G...........C......  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      ------------------CDR3-IMGT-------------------->                                 
                                       R  D  N  R  N  S  C  Q  H  P  P  C  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13013  272  AGAGATAATAGGAATTCTTGCCAGCACCCCCCTTGCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  352
V  92.7% (255/275)  IGHV6-1*01   301  .....----------------------------------------------------------------------------  305
                                       R                                                                               
D  100.0% (5/5)     IGHD2-2*01   18   --------------------.....--------------------------------------------------------  22
J  100.0% (46/46)   IGHJ6*02     17   -----------------------------------..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_137797

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           396     2e-112
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGAC	GTATTACTATGATACTGATAATTATTACTAC	GGCCCCTGTTTA	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGACGTATTACTATGATACTGATAATTATTACTACGGCCCCTGTTTAGACTTC	ARDRTYYYDTDNYYYGPCLDF	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  M  R  V  S  C  K  A  S  G  G  T  F  S  T  S
                    Query_13014  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGATGAGGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCACCTC  90
V  93.5% (272/291)  IGHV1-69*01  6    ..................G...........................G...A...................................G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  V  I  P  F  F  G  T  P  H  Y  A  Q
                    Query_13014  91   TGCTGTCAGCTGGGTGCGACAGGCCCCGGGACAAGGACTTGAGTGGATGGGAGGGGTCATCCCTTTCTTTGGGACACCACATTACGCACA  180
V  93.5% (272/291)  IGHV1-69*01  96   ....A......................T........G..................A........A.......T...G..A.C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  V  Y  M  E  L  T  R  L  R  S  E  D  T  A
                    Query_13014  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACGGTCTACATGGAGCTGACCAGACTGAGATCTGAGGACACGGC  270
V  93.5% (272/291)  IGHV1-69*01  186  ................................................A.C..............G...C....................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        V  Y  Y  C  A  R  D  R  T  Y  Y  Y  D  T  D  N  Y  Y  Y  G  P  C  L  D  F  W  G  Q  G  T
                    Query_13014  271  CGTCTATTACTGTGCGAGAGATAGGACGTATTACTATGATACTGATAATTATTACTACGGCCCCTGTTTAGACTTCTGGGGCCAGGGAAC  360
V  93.5% (272/291)  IGHV1-69*01  276  ...G.................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  83.9% (26/31)    IGHD3-22*01  1    ---------------------------..............G.AG.GG..........--------------------------------  31
J  97.5% (39/40)    IGHJ4*02     9    ----------------------------------------------------------------------....A...............  28

                                                          
                                        L  V  T  V  S  S  
                    Query_13014  361  CCTGGTCACCGTCTCCTCAG  380
J  97.5% (39/40)    IGHJ4*02     29   ....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_268160

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-28*01                                                                                           367     6e-104
IGHD1-26*01                                                                                           14.1    8.3   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-28*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAA	TTGCATCGGTCGCGC	GTGGGAG	T	TACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTGCATCGGTCGCGCGTGGGAGTTACGTTGACTAC	ARIASVARGSYVDY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	112	2	0	98.2
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	241	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  N  N  W  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_13015  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCATCAGCAGTAATAACTGGTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGACTG  90
V  97.6% (241/247)  IGHV4-28*01  49   ..............................................G...........................................  138
                                       T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  S  N  W  W  G  W  I  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  S  I  S  Y  T  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 
                    Query_13015  91   GAGTGGATTGGGTCCATCTCTTATACTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCCAAG  180
V  97.6% (241/247)  IGHV4-28*01  139  .............A.....A.....G................................................................  228
                                       E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  R  S  V  T  A  V  D  T  A  V  Y  S  C  A  R  I  A  S  V  A  R  G  S 
                    Query_13015  181  AACCAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGTGGACACGGCCGTGTATTCCTGTGCGAGAATTGCATCGGTCGCGCGTGGGAGT  270
V  97.6% (241/247)  IGHV4-28*01  229  .......................C...............................A...........-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  V  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD1-26*01  7    ----------------------------------------------------------------------------------.......-  13

                                      ----------->                                  
                                       Y  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13015  271  TACGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.8% (45/46)    IGHJ4*02     3    ...T..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_268162

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           399     3e-113
IGHD2-15*01                                                                                           10.3    137   
IGHJ3*01                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	T	CTGCT	TCCGAAGACTTCGGCCCCC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGCTTCCGAAGACTTCGGCCCCCGATGCTTTTGATTTC	ARDLLPKTSAPDAFDF	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	43	8	0	84.3
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  I  S  C  K  A  S  G  Y  I  F  T  S  Y
                    Query_13016  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGATCTCCTGCAAGGCATCTGGATACATCTTCACCAGCTA  90
V  93.8% (273/291)  IGHV1-46*01  6    ..................G.................................G.T......................C............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  L  S  W  V  R  Q  A  P  E  R  G  L  E  R  M  G  I  I  N  P  S  G  G  I  T  S  Y  A  Q
                    Query_13016  91   CTATCTAAGCTGGGTGCGCCAGGCCCCTGAACGAGGGCTTGAGCGGATGGGAATAATCAACCCTAGTGGTGGTATCACAAGCTACGCACA  180
V  93.8% (273/291)  IGHV1-46*01  96   ....A.GCA.........A..........G..A..........T..............................G...............  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  A  M  T  R  D  T  S  T  S  T  V  Y  M  Q  L  N  S  L  R  S  E  D  T  A
                    Query_13016  181  GAAGTTCCAGGGCAGAGTCGCCATGACCAGGGACACGTCCACTAGTACAGTCTACATGCAGCTGAACAGCCTGAGATCTGAGGACACGGC  270
V  93.8% (273/291)  IGHV1-46*01  186  ...................A......................G..C............G......G........................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  R  D  L  L  P  K  T  S  A  P  D  A  F  D  F  W  G  Q  G  T  L  V  T  V  S
                    Query_13016  271  CGTGTATTACTGTGCGAGAGATCTGCTTCCGAAGACTTCGGCCCCCGATGCTTTTGATTTCTGGGGCCAAGGGACACTGGTCACCGTCTC  360
V  93.8% (273/291)  IGHV1-46*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD2-15*01  22   ----------------------.....---------------------------------------------------------------  26
J  95.9% (47/49)    IGHJ3*01     2    ----------------------------------------------............G.................A.............  45

                                           
                                        S  
                    Query_13016  361  TTCAG  365
J  95.9% (47/49)    IGHJ3*01     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_268163

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHD5-12*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGCGGGA	TGGCTAC	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGACAGGTGCGGGATGGCTACCTGACTAC	VTGAGWLPDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	5	2	0	71.4
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  G  Y  Y  L  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13017  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTGGTTATTATTTGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*01  49   ......................................C...A....C..C.G..G.................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  L  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_13017  91   TGGCTTGGTTTGATCTCTTACAGCGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAACAAC  180
V  92.2% (225/244)  IGHV4-59*01  139  ...A....G.AT....A......T.....C........................................................G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  V  T  G  A  G  W  L  P  D  Y  W 
                    Query_13017  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCCTGTATTATTGTGTGACAGGTGCGGGATGGCTACCTGACTACTGG  270
V  92.2% (225/244)  IGHV4-59*01  229  .............................................G.......C....C..G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-12*01  11   ------------------------------------------------------------------------.......-----------  17
J  100.0% (41/41)   IGHJ4*02     8    --------------------------------------------------------------------------------..........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_13017  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (41/41)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_268164

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           322     2e-90
IGHD6-19*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCCACGTCTGTGT	CAGTGACTGG	CAGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATTCCACGTCTGTGTCAGTGACTGGCAGGTTTGACTAC	VRDSTSVSVTGRFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  G  N  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13018  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCAGTTTCAGCGGAAATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-33*01  47   ....................................CC.....TA.CT...G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  F  D  G  S  N  K  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_13018  91   AGTGGGTGGCAGTTATATGGTTTGATGGAAGTAATAAATACTATGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  91.2% (228/250)  IGHV3-33*01  137  .....................A...................................A...........................T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      N  N  A  L  Y  L  Q  M  T  S  L  R  V  E  D  T  A  F  Y  Y  C  V  R  D  S  T  S  V  S  V  
                    Query_13018  181  ACAATGCGCTTTACCTTCAAATGACCAGCCTGAGAGTCGAGGACACGGCTTTTTACTACTGTGTGAGAGATTCCACGTCTGTGTCAGTGA  270
V  91.2% (228/250)  IGHV3-33*01  227  .G..CA....G..T..G.......A...........C.............G.G..T.......C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD6-19*01  9    ------------------------------------------------------------------------------------.....G  14

                                      ---------------->                                  
                                      T  G  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13018  271  CTGGCAGGTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  90.0% (9/10)     IGHD6-19*01  15   ....-----------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     6    --------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_137794

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            341     5e-96
IGHJ4*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	N/A	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	N/A	N/A	AGGCAATTGAACCCCAAAAT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAAGGCAATTGAACCCCAAAATCTTTGACTAC	VRRQLNPKIFDY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  K  N  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13019  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAAGAACTTTTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (233/248)  IGHV3-7*03   47   ..........................................GT.G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  M  R  Q  D  G  R  E  I  Y  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_13019  91   AGTGGGTGGCCAACATGCGACAAGATGGGCGTGAGATATACTATGTGGACTCTGTGAGGGGCCGATTCACTATCTCCAGAGACAACGCCA  180
V  94.0% (233/248)  IGHV3-7*03   137  ................AAAG........AA......A....................A............C...................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  R  Q  L  N  P  K  I  
                    Query_13019  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGTGAGAAGGCAATTGAACCCCAAAATCT  270
V  94.0% (233/248)  IGHV3-7*03   227  ....................................................G..........C....----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (44/44)   IGHJ4*01     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13019  271  TTGACTACTGGGGCCAAGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (44/44)   IGHJ4*01     7    ..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_10878

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           422     2e-120
IGHD2-2*02                                                                                            19.9    0.18  
IGHJ5*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAAAGTGGCGGGGA	ACCAGCTGTTATA	AAGAGCGCTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCC	ARGKWRGTSCYKERCWFDP	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	279	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  S  N  Y
                    Query_13020  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTAGCAACTA  90
V  96.9% (279/288)  IGHV5-51*03  6    .................................................................G...........G.....C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  R  Y  R  P
                    Query_13020  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATAATCTATCCTGGTGACTCTGAGACCAGATACAGACC  180
V  96.9% (279/288)  IGHV5-51*03  96   ........G.............................................C....................T...........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13020  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (279/288)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  G  K  W  R  G  T  S  C  Y  K  E  R  C  W  F  D  P  W  G  Q  G  T  L  V
                    Query_13020  271  CATGTATTATTGTGCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  360
V  96.9% (279/288)  IGHV5-51*03  276  .........C........------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  92.3% (12/13)    IGHD2-2*02   17   ----------------------------------........C....-------------------------------------------  29
J  100.0% (47/47)   IGHJ5*02     5    ---------------------------------------------------------.................................  37

                                                    
                                        T  V  S  S  
                    Query_13020  361  CACCGTCTCCTCAG  374
J  100.0% (47/47)   IGHJ5*02     38   ..............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_21274

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     3e-93
IGHD2-15*01                                                                                           21.8    0.039
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AAAGTCT	GATATTGTAGT	CCC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGTCTGATATTGTAGTCCCTATGGACGTC	AKSDIVVPMDV	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13021  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.4% (228/244)  IGHV3-21*01  47   .............................................G......C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  V  G  T  Y  I  E  Y  A  S  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_13021  91   AGTGGGTCTCGTACATTTCTAGTGTTGGTACTTACATAGAGTACGCAAGCTCAGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  93.4% (228/244)  IGHV3-21*01  137  ..........A.C....AG....AG.A...G.......T.C......GA......................A..................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  K  S  D  I  V  V  P  M  
                    Query_13021  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGCAAAGTCTGATATTGTAGTCCCTATGG  270
V  93.4% (228/244)  IGHV3-21*01  227  .........................................................A......--------------------------  290
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD2-15*01  3    -----------------------------------------------------------------------...........--------  13
J  100.0% (43/43)   IGHJ6*02     20   -------------------------------------------------------------------------------------.....  24

                                      ---->                                 
                                      D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13021  271  ACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  308
J  100.0% (43/43)   IGHJ6*02     25   ......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_325251

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*03                                                                                           344     6e-97
IGHD2-8*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*03	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCCTGG	ATTGCACTGATGGTGTCTGTTAT	GCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATCGCCTGGATTGCACTGATGGTGTCTGTTATGCTTTTGACCAA	VKDRLDCTDGVCYAFDQ	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  N  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13022  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACATTCAGTAACTATGCTATGCACTGGGTCCGCCAGGCTCCTGGGAAGGGACTGG  90
V  94.0% (235/250)  IGHV3-64*03  47   .....................................C.......G..............................A.............  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  P  N  G  G  S  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13022  91   AATATGTTTCAGCGATTAGTCCTAATGGAGGTAGTACATACTTCGCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-64*03  137  .............T......AG......G.....C.......A...............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  D  R  L  D  C  T  D  
                    Query_13022  181  GGAACACTCTATATCTCCAAATGAGCAGTCTGAGAGCTGAGGACACGGCTCTCTATTACTGTGTGAAAGATCGCCTGGATTGCACTGATG  270
V  94.0% (235/250)  IGHV3-64*03  227  A......G..G...G...................................G.G.................--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  82.6% (19/23)    IGHD2-8*01   6    ------------------------------------------------------------------------------....T...A...  17

                                      GT-------------------->                                  
                                      G  V  C  Y  A  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13022  271  GTGTCTGTTATGCTTTTGACCAATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  82.6% (19/23)    IGHD2-8*01   18   ....A..C...----------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    --------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_137793

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           449     3e-128
IGHD3-3*01                                                                                            41.1    8e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACGCCT	CGATTTTTGGAGTGGTTATTGTAC	GAGAATCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTAC	ARYASIFGVVIVRESFDY	291	344	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	74	0	0	100
CDR1-IMGT	78	101	24	24	0	0	100
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	114	0	0	100
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	290	3	0	99


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_13023  4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  93
V  99.0% (290/293)  IGHV5-51*01  2    ..........................................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_13023  94   GCTACTGGATCGGCTGGGTGCGCCAGATGCCTGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACTAGATACA  183
V  99.0% (290/293)  IGHV5-51*01  92   ...............................C................................T.................C.......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_13023  184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  99.0% (290/293)  IGHV5-51*01  182  ..........................................................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------------CDR3-IMGT--------------------->                   
                                      T  A  M  Y  Y  C  A  R  Y  A  S  I  F  G  V  V  I  V  R  E  S  F  D  Y  W  G  Q  G  T  L  
                    Query_13023  274  CCGCCATGTATTACTGTGCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTACTGGGGCCAGGGAACCCTGG  363
V  99.0% (290/293)  IGHV5-51*01  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  95.8% (23/24)    IGHD3-3*01   7    ------------------------------....................A...------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    --------------------------------------------------------------............................  33

                                                     
                                      V  T  V  S  S  
                    Query_13023  364  TCACCGTCTCCTCAG  378
J  100.0% (43/43)   IGHJ4*02     34   ...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_205781

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           346     2e-97
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CACCC	TATTGTAGTAGTGTCAGTTGTTATG	AGGGATC	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGCACCCTATTGTAGTAGTGTCAGTTGTTATGAGGGATCCTACCATTACGGTATGGACGTC	VRAPYCSSVSCYEGSYHYGMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13024  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCCGGATTCACCTTCAGTACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-33*01  47   ............................T................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  W  Y  D  G  T  V  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13024  91   AGTGGGTGGCAATTATATGGTATGATGGAACTGTTAAATACTATGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-33*01  137  ...........G..................G.AA...........C............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  D  D  T  A  V  Y  F  C  V  R  A  P  Y  C  S  S  V  
                    Query_13024  181  AGAACACGTTGTATTTGCAAATGGATAGCCTGAGAGCCGACGACACGGCTGTGTATTTCTGTGTGAGAGCACCCTATTGTAGTAGTGTCA  270
V  94.4% (235/249)  IGHV3-33*01  227  ........C.....C........A.C..............G................A.....C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.0% (21/25)    IGHD2-2*01   5    --------------------------------------------------------------------------............AC..  20

                                      -CDR3-IMGT--------------------------->                                 
                                      S  C  Y  E  G  S  Y  H  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13024  271  GTTGTTATGAGGGATCCTACCATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  84.0% (21/25)    IGHD2-2*01   21   .C..C....--------------------------------------------------------------  29
J  96.4% (53/55)    IGHJ6*02     8    ----------------....T.C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_137790

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           336     1e-94
IGHD5-18*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTCAAGC	GTGGATACAGCT	TAG	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTCAAGCGTGGATACAGCTTAGATTACTACTTCTATTACGGTATGGACGTC	ARLKRGYSLDYYFYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  T  Y  V  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13025  1    GGTCCCTGAGACTCTCCTGTGTAGCGTCTGGATTCACCTTCAGTACCTATGTCATGCACTGGGTCCGCCAGGCTCCAGGTAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-33*01  47   .....................C.......................G.....G...........................C..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  T  A  I  W  H  D  G  T  N  K  Y  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  S  
                    Query_13025  91   AGTGGGTGACAGCTATATGGCATGATGGAACTAATAAATACTATGCCGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-33*01  137  ........G...T.......T.........G...............A.........A.................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      R  N  T  L  Y  L  Q  M  S  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  L  K  R  G  Y  S  L  
                    Query_13025  181  GGAACACTCTGTATCTGCAAATGAGTAGCCTGAGAGTCGAGGACACGGCTGTGTATTATTGTGCGAGGCTCAAGCGTGGATACAGCTTAG  270
V  93.5% (231/247)  IGHV3-33*01  227  A......G................AC..........C.....................C........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (12/12)   IGHD5-18*01  1    ---------------------------------------------------------------------------............---  12

                                      -IMGT----------------------->                                 
                                      D  Y  Y  F  Y  Y  G  M  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_13025  271  ATTACTACTTCTATTACGGTATGGACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  332
J  95.2% (59/62)    IGHJ6*02     1    .........A...C......................A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_205780

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           346     2e-97
IGHD6-6*01                                                                                            23.8    0.010
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTAAG	GG	TAGCAGCTCGTC	TTCGG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGGGTAGCAGCTCGTCTTCGG	VRVAARLR	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13026  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.7% (234/247)  IGHV3-74*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  N  T  T  F  Y  A  D  S  V  K  G  R  F  T  M  S  R  D  N  A  
                    Query_13026  91   TGTGGGTCTCACGCATTAATAGTGATGGCAATACTACATTCTACGCGGACTCCGTGAAGGGCCGATTCACCATGTCCAGAGACAACGCCA  180
V  94.7% (234/247)  IGHV3-74*01  137  .............T..............G.G..GC...AG.................................C................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      K  N  T  L  F  L  Q  M  K  S  L  R  A  D  D  T  A  V  Y  Y  C  V  R  V  A  A  R  L  R  W  
                    Query_13026  181  AGAACACGCTGTTTCTGCAAATGAAGAGTCTGAGAGCCGACGACACGGCTGTATATTACTGTGTAAGGGTAGCAGCTCGTCTTCGGTGGG  270
V  94.7% (234/247)  IGHV3-74*01  227  ............A............C..............G...........G..........C...-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (12/12)   IGHD6-6*01   6    ---------------------------------------------------------------------............---------  17
J  97.1% (33/34)    IGHJ4*02     15   --------------------------------------------------------------------------------------....  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  P  
                    Query_13026  271  GCCAGGGAACCCTGGTCACCGTCTCCCCAG  300
J  97.1% (33/34)    IGHJ4*02     19   ..........................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_250847

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           346     2e-97
IGHD2-21*01                                                                                           10.3    123  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TGTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTGTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFVQERVYYFDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  A  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_13027  4    CCCTGAGACTCTCCTGTACTGTCTCTGGCGCCTTCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  94.7% (234/247)  IGHV4-31*02  50   .....TCC...A................T.G..C......C.................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_13027  94   TGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCTA  183
V  94.7% (234/247)  IGHV4-31*02  140  .................................G.............C......................C........A..........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  V  Q  E  
                    Query_13027  184  AGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTTCTCTATTTGTCCAAGAAA  273
V  94.7% (234/247)  IGHV4-31*02  230  .........................C.........................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  22   --------------------------------------------------------------------------.....-----------  26

                                      T------------------>                                  
                                      R  V  Y  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_13027  274  GAGTCTACTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  327
J  97.9% (47/48)    IGHJ4*02     1    ------.....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_250841

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           310     1e-86
IGHD2-21*02                                                                                           29.5    2e-04
IGHJ4*01                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*02	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GA	TGTGGTGGTGACTGC	CATGGTTCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGATGTGGTGGTGACTGCCATGGTTCCCTTGACTAC	ARGCGGDCHGSLDY	230	271	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	23	1	0	95.8
FR2-IMGT	41	91	51	51	0	0	100
CDR2-IMGT	92	115	24	21	3	0	87.5
FR3-IMGT	116	229	114	105	9	0	92.1
CDR3-IMGT (germline)	230	236	7	7	0	0	100
Total	N/A	N/A	224	211	13	0	94.2


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  L  W  Y  D
                    Query_13028  13   GTCTGGATTCACCTTCAGTAGATATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTTTATGGTATGA  102
V  94.2% (211/224)  IGHV3-33*01  72   .....................C.........................................................A..........  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  K  T  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  E  M  S
                    Query_13028  103  TGGAAGTAAGACATATTATGGAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAATTCCAAGAACACGTTGTACCTGGAAATGAG  192
V  94.2% (211/224)  IGHV3-33*01  162  .........T.A...C....C..................A.................................C....T...C......A  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------------CDR3-IMGT--------------->           
                                        S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  G  C  G  G  D  C  H  G  S  L  D  Y  W  G  Q  G
                    Query_13028  193  CAGCCTGAGAGGCGAGGACACGGCTGTATATTACTGTGCGAGAGGATGTGGTGGTGACTGCCATGGTTCCCTTGACTACTGGGGCCAAGG  282
V  94.2% (211/224)  IGHV3-33*01  252  ...........C...............G................----------------------------------------------  295
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (15/15)   IGHD2-21*02  8    ----------------------------------------------...............-----------------------------  22
J  92.9% (39/42)    IGHJ4*01     7    -----------------------------------------------------------------------...................  25

                                                             
                                        T  P  V  T  G  S  A  
                    Query_13028  283  AACCCCGGTCACCGGCTCCGCAG  305
J  92.9% (39/42)    IGHJ4*01     26   .....T........T....T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_21279

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           397     8e-113
IGHD2-21*02                                                                                           16.1    2.5   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TTTG	GGTGATGACTG	GGATCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTTTGGGTGATGACTGGGATCAATACTACTTTGACTAC	ASLGDDWDQYYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	271	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  T  G  E  S  L  K  I  S  C  R  C  S  G  Y  R  F  T  N  Y
                    Query_13029  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGACCGGGGAGTCTCTGAAGATCTCCTGTAGGTGTTCTGGATACAGGTTTACCAATTA  90
V  94.1% (271/288)  IGHV5-51*01  6    ..................................C...........................A.G.............C.......GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  Y  M  G  M  M  N  P  G  D  S  D  T  R  Y  S  P
                    Query_13029  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTACATGGGAATGATGAATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  94.1% (271/288)  IGHV5-51*01  96   ........G...................................GG.....G..C..CT...............................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  G  Q  V  T  I  S  A  D  E  S  I  S  T  A  Y  L  Q  W  S  S  L  E  A  S  D  T  A
                    Query_13029  181  GCCCTTCCAAGGCCAGGTCACCATCTCAGCCGACGAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACACCGC  270
V  94.1% (271/288)  IGHV5-51*01  186  .T................................A..........C...........................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  S  L  G  D  D  W  D  Q  Y  Y  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_13029  271  CATGTATTACTGTGCGAGTTTGGGTGATGACTGGGATCAATACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  359
V  94.1% (271/288)  IGHV5-51*01  276  ..................-----------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                          
D  90.9% (10/11)    IGHD2-21*02  11   ----------------------....G......--------------------------------------------------------  21
J  97.9% (47/48)    IGHJ4*02     1    -----------------------------------------...................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_352658

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           363     1e-102
IGHD3-16*01                                                                                           12.2    31    
IGHJ2*01                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TGCTTA	CAATACTA	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTGCTTACAATACTAGGTACTTCGATCTC	ARAAYNTRYFDL	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	239	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13030  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGTCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (239/246)  IGHV3-53*01  47   ........................................................AG................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_13030  91   AGTGGGTCTCAGTTATTTATAGCGGTGGTAGCACATACTACGCAGACTCCCTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  97.2% (239/246)  IGHV3-53*01  137  ..................................................G.......................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------CDR3-IMGT--------
                                      N  T  V  F  L  H  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  A  Y  N  T  R  Y  F  
                    Query_13030  181  ACACGGTGTTTCTTCACATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAGAGCTGCTTACAATACTAGGTACTTCG  270
V  97.2% (239/246)  IGHV3-53*01  227  .....C...A......A................................G................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (6/6)     IGHD3-16*01  28   -------------------------------------------------------------------......-----------------  33
J  100.0% (48/48)   IGHJ2*01     6    ---------------------------------------------------------------------------------.........  14

                                      ---->                                  
                                      D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_13030  271  ATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  309
J  100.0% (48/48)   IGHJ2*01     15   .......................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_250848

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     9e-100
IGHD3-22*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCC	ATTACTATGATCGTGGTG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCCATTACTATGATCGTGGTGACTACTTTGACCAC	ARGLHYYDRGDYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  R  V  S  I  S  S  G  G  H  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_13031  1    ACCCTGTCCCTCACCTGCACTGTCTCTCGTGTCTCCATCAGCAGTGGTGGTCACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.2% (238/250)  IGHV4-31*03  49   ...........................G...G...................T......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  K  S  L  K  S  R  I  T  I  S  V  D  T  S 
                    Query_13031  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAATAAGTCCCTCAAGAGTCGAATTACCATATCGGTAGACACGTCT  180
V  95.2% (238/250)  IGHV4-31*03  139  ..................................G............CCC................G..........A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  H  Y  Y  D  R 
                    Query_13031  181  AAGAACCAGTTCTCCCTGACGCTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCTCCATTACTATGATCGT  270
V  95.2% (238/250)  IGHV4-31*03  229  ...................A.....G...........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (16/18)    IGHD3-22*01  3    ----------------------------------------------------------------------------...........A..  16

                                      ----------------->                                  
                                       G  D  Y  F  D  H  W  G  Q  G  T  L  L  T  V  S  S  
                    Query_13031  271  GGTGACTACTTTGACCACTGGGGCCAGGGAACCCTGCTCACCGTCTCCTCAG  322
D  88.9% (16/18)    IGHD3-22*01  17   A...------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    ----...........T....................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_250849

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           419     2e-119
IGHD1-1*01                                                                                            14.1    9.0   
IGHJ3*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-1*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCATATATAGT	CTGGAAC	C	TATCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCATATATAGTCTGGAACCTATC	ATIYSLEPI	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	286	277	9	0	96.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  L 
                    Query_13032  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGGTACACCTTTACCAGCCTT  91
V  96.9% (277/286)  IGHV1-18*01  7    .......................................................................T...............TA.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  F  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_13032  92   GGTTTCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACACAAACTATGCACAG  181
V  96.9% (277/286)  IGHV1-18*01  97   ...A...G..................................................................................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  D  R  V  S  V  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_13032  182  AAGCTCCAGGACAGAGTCTCCGTGACCACAGACACATCCACGAGCACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.9% (277/286)  IGHV1-18*01  187  ..........G.......A..A......................................C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------CDR3-IMGT-------->                                  
                                       V  Y  Y  C  A  T  I  Y  S  L  E  P  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_13032  272  GTGTATTACTGTGCGACCATATATAGTCTGGAACCTATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  344
V  96.9% (277/286)  IGHV1-18*01  277  ................---------------------------------------------------------  292
                                       V  Y  Y  C  A                                                           
D  100.0% (7/7)     IGHD1-1*01   8    ---------------------------.......---------------------------------------  14
J  97.4% (37/38)    IGHJ3*02     13   -----------------------------------...................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_84145

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            324     8e-91
IGHD2-21*02                                                                                           16.1    2.4  
IGHJ3*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGCCCAA	GGTGACTG	GCCATAATGAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGCCCAAGGTGACTGGCCATAATGAATTTGATATC	ARDRPKVTGHNEFDI	264	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	44	6	0	88
CDR1-IMGT	51	77	27	20	7	0	74.1
FR2-IMGT	78	128	51	50	1	0	98
CDR2-IMGT	129	149	21	16	5	0	76.2
FR3-IMGT	150	263	114	101	13	0	88.6
CDR3-IMGT (germline)	264	271	8	8	0	0	100
Total	N/A	N/A	271	239	32	0	88.2


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  E  T  L  F  L  T  C  D  V  S  G  G  S  I  V  N  S  N  W  W  N  W  V  
                    Query_13033  1    CAGGACTGGTGAAGCCCTCGGAGACCCTTTTCCTCACGTGCGATGTCTCTGGTGGCTCCATTGTTAATTCTAACTGGTGGAATTGGGTCC  90
V  88.2% (239/271)  IGHV4-4*02   26   ................T....G......G.C......C....C..................CAGC.G.AG...........G........  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  M  Y  H  S  G  K  V  N  Y  N  P  S  L  K  S  R  V  
                    Query_13033  91   GCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATGTATCATAGTGGGAAAGTCAACTACAATCCGTCCCTGAAGAGTCGAGTCG  180
V  88.2% (239/271)  IGHV4-4*02   116  ........................................C.............GCAC.........C........C............A  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      V  I  S  A  D  E  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  
                    Query_13033  181  TTATATCAGCAGACGAGTCCAAGAATCAGTTCTCCCTGAAATTGACTTCTGTGACCGCCGCGGACACGGCCGTATATTACTGTGCGAGAG  270
V  88.2% (239/271)  IGHV4-4*02   206  CC.......T....A..........C..............GC...GC..........................G................  295
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  

                                      -----------CDR3-IMGT----------------->                                  
                                      D  R  P  K  V  T  G  H  N  E  F  D  I  W  G  Q  G  T  T  V  I  V  S  S  
                    Query_13033  271  ATAGGCCCAAGGTGACTGGCCATAATGAATTTGATATCTGGGGCCAAGGGACAACGGTCATCGTCTCTTCAG  342
V  88.2% (239/271)  IGHV4-4*02   296  .-----------------------------------------------------------------------  296
                                                                                                              
D  100.0% (8/8)     IGHD2-21*02  14   ----------........------------------------------------------------------  21
J  95.3% (41/43)    IGHJ3*02     8    -----------------------------.........................T.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_104930

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           339     2e-95
IGHD5-12*01                                                                                           12.2    37   
IGHJ4*02                                                                                              52.6    6e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD5-12*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCGGATTTCCCTCTGATGGAC	GTGAATATA	TGACCCCGCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCGGATTTCCCTCTGATGGACGTGAATATATGACCCCGCTCTTTGACTTT	ARAGFPSDGREYMTPLFDF	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	62	7	0	89.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	252	35	0	87.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  *  S  G  A  E  V  K  K  P  G  A  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I  N  F 
                    Query_13034  2    CAGCTGGTGTAGTCTGGAGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGACGATCTCTTGCCAGGCTTCCGGTTACAGCTTTATCAACTTC  91
V  87.8% (252/287)  IGHV1-18*04  7    .........C.............G.........................A.G....C...A.......T.......C.....C..G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  A  H  R  G  D  T  K  Y  A  Q 
                    Query_13034  92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTCGAATGGCTGGGATGGATCAGCGCGCACAGAGGTGACACAAAATATGCACAG  181
V  87.8% (252/287)  IGHV1-18*04  97   ................................A.....T..G...A................TT...AT...A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  F  L  D  V  R  S  L  R  S  D  D  T  A 
                    Query_13034  182  AGTTTCCAGGGCAGAGTCACCATGACCACAGACACACTCACGGGAACAGCGTTCCTGGACGTGAGGAGCCTGCGATCTGACGACACGGCC  271
V  87.8% (252/287)  IGHV1-18*04  187  .AGC................................TC....A.C.....C.A.A....GC...........A.................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  A  R  A  G  F  P  S  D  G  R  E  Y  M  T  P  L  F  D  F  W  G  Q  G  T  P  V 
                    Query_13034  272  GTTTATTACTGTGCGAGGGCCGGATTTCCCTCTGATGGACGTGAATATATGACCCCGCTCTTTGACTTTTGGGGCCAGGGAACCCCGGTC  361
V  87.8% (252/287)  IGHV1-18*04  277  ..G..............-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  88.9% (8/9)      IGHD5-12*01  1    ----------------------------------------...G.....-----------------------------------------  9
J  89.7% (35/39)    IGHJ4*02     5    -----------------------------------------------------------........AC................T....  35

                                              
                                       S  V  S
                    Query_13034  362  TCCGTCTC  369
J  89.7% (35/39)    IGHJ4*02     36   A.......  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_104931

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD2-2*01                                                                                            39.1    2e-07
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACG	TTGTAGTAGTACCAGCTGCT	TTTACGAG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACGTTGTAGTAGTACCAGCTGCTTTTACGAGATGGACGTC	ARVRCSSTSCFYEMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  Q 
                    Query_13035  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGACTCCATCAATAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGCAG  90
V  95.9% (234/244)  IGHV4-59*01  49   .............................T.G........G....T.........................................G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  K  N  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13035  91   TGGATTGGCTATATCTATTACAGTGGGAGCACCAAGAACAACCCTTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.9% (234/244)  IGHV4-59*01  139  ........G..........................CT.......C.............................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  C  S  S  T  S  C  F 
                    Query_13035  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGTACGTTGTAGTAGTACCAGCTGCTTT  270
V  95.9% (234/244)  IGHV4-59*01  229  ...............................................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD2-2*01   7    --------------------------------------------------------------------....................--  26

                                      -------------->                                 
                                       Y  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13035  271  TACGAGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  100.0% (42/42)   IGHJ6*02     21   ------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_104932

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAACA	TATGACT	TATAGCAGT	AGTCCATTA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATATGACTTATAGCAGTAGTCCATTAGACTAC	AKHMTYSSSPLDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	13	8	0	61.9
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	222	29	0	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  A  S  V  S  S  G  D  Y  Y  W  G  W  I  R  Q  P  P  G  R  G 
                    Query_13036  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCGTCAGTAGTGGTGACTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAGGGGG  90
V  88.4% (222/251)  IGHV4-39*01  49   ..................A............G....A....C...A..AGT..................................A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  Y  N  T  R  Y  P  Y  Y  S  L  S  L  K  S  R  V  T  I  S  V  D  S  S 
                    Query_13036  91   CTGGAGTGGCTTGGGAGTATCTATAATACTAGATATCCCTACTATAGTTTGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACTCGTCC  180
V  88.4% (222/251)  IGHV4-39*01  139  .........A..............T...G.G.GAGCA.......C.ACCC..................................A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  E  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  H  M  T  Y  S  S  S 
                    Query_13036  181  AAGAACGAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTTTATTTCTGTGCGAAACATATGACTTATAGCAGTAGT  270
V  88.4% (222/251)  IGHV4-39*01  229  ......C............A.................................G....A........G...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD6-19*01  4    ------------------------------------------------------------------------------.........---  12

                                      ----------->                                  
                                       P  L  D  Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_13036  271  CCATTAGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCTTCAG  316
J  95.0% (38/40)    IGHJ4*02     9    ------.............A.....................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_104934

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            325     3e-91
IGHD3-10*01                                                                                           41.1    7e-08
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAAAAAGG	TTACTATGGTTCGGGGAGTTA	CCCCCTCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAAAAAGGTTACTATGGTTCGGGGAGTTACCCCCTCCACTACTTCTATCACGCTCTGGGCGTC	ARDQKGYYGSGSYPLHYFYHALGV	239	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	11	0	0	100
CDR1-IMGT	26	49	24	20	4	0	83.3
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	124	24	20	4	0	83.3
FR3-IMGT	125	238	114	111	3	0	97.4
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	232	220	12	0	94.8


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  I  T  N  F  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  
                    Query_13037  15   GTGCAGCCTCTGGATTCACCATTACTAACTTTTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATAA  104
V  94.8% (220/232)  IGHV3-7*01   65   ....................T...G..G..A.........C.................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      K  E  N  G  N  E  R  Y  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  
                    Query_13037  105  AGGAAAATGGAAATGAGAGATACTATGTGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGC  194
V  94.8% (220/232)  IGHV3-7*01   155  ..C..G......G.....A....................A..................................................  244
                                      K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><-------------------------------CDR3-IMGT-----
                                      Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Q  K  G  Y  Y  G  S  G  S  Y  P  L  
                    Query_13037  195  AATTGAACAGCCTGAGAGCCGAGGACACCGCTGTGTATTACTGTGCGAGAGATCAAAAAGGTTACTATGGTTCGGGGAGTTACCCCCTCC  284
V  94.8% (220/232)  IGHV3-7*01   245  ..A.........................G.......................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (21/21)   IGHD3-10*01  4    -------------------------------------------------------------.....................--------  24

                                      ------------------------->                                 
                                      H  Y  F  Y  H  A  L  G  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13037  285  ACTACTTCTATCACGCTCTGGGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  343
J  89.8% (53/59)    IGHJ6*02     4    ......A...CT...G.A...A.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_323337

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           402     3e-114
IGHD2-21*01                                                                                           18.0    0.69  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAC	G	ATTGCGGTGGTG	TAGTGATGGAACTTGTTACTCTGGTTCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTAT	AGRLRWCSDGTCYSGSFEY	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	69	2	0	97.2
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	296	7	6	1	0	85.7
Total	N/A	N/A	291	274	17	0	94.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  K  F  T  S  
                    Query_13038  6    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCCGGAGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAAGTTTACCAGCT  95
V  94.2% (274/291)  IGHV5-51*01  5    ...............................A........G.....................................GC..........  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  F  P  R  D  S  D  T  R  Y  N  
                    Query_13038  96   ATTGGATCGGCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTCGTGACTCCGATACCAGATATAACC  185
V  94.2% (274/291)  IGHV5-51*01  95   .C......................T...........................G.......A....G.......T...........C.G..  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  D  Q  V  T  I  S  A  D  T  S  I  S  T  A  Y  L  Q  W  D  S  L  K  A  S  D  T  
                    Query_13038  186  CGTCCTTCCAAGACCAGGTCACCATCTCAGCCGACACGTCCATCAGCACCGCCTACCTGCAGTGGGACAGCCTGAAGGCCTCGGACACCG  275
V  94.2% (274/291)  IGHV5-51*01  185  ............G.......................A............................AG.......................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------------CDR3-IMGT----------------------->                   
                                      A  M  Y  Y  C  A  G  R  L  R  W  C  S  D  G  T  C  Y  S  G  S  F  E  Y  W  G  Q  G  T  L  
                    Query_13038  276  CCATGTATTACTGTGCGGGACGATTGCGGTGGTGTAGTGATGGAACTTGTTACTCTGGTTCATTTGAGTATTGGGGCCAGGGAACCCTGG  365
V  94.2% (274/291)  IGHV5-51*01  275  .................A...---------------------------------------------------------------------  295
                                      A  M  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD2-21*01  6    ----------------------....T.......--------------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    --------------------------------------------------------------.....C..C...................  33

                                                     
                                      V  T  V  S  S  
                    Query_13038  366  TCACCGTCTCCTCAG  380
J  95.3% (41/43)    IGHJ4*02     34   ...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_97241

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           341     5e-96
IGHD4-17*01                                                                                           19.9    0.16 
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD4-17*01	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CACAG	TTCCCCCCAG	CTACGGTGAC	AGATACGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACAGTTCCCCCCAGCTACGGTGACAGATACGGTGCTTTTGATATC	HSSPQLR*QIRCF*Y	250	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	249	115	109	5	1	94.8
CDR3-IMGT (germline)	250	256	7	7	0	0	100
Total	N/A	N/A	256	239	16	1	93.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  Y  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13039  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACTTTCAGTTATGCCTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.4% (239/256)  IGHV3-15*01  47   .......T.............C......................A.C...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  I  G  R  V  K  S  T  D  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  V  S  R  D  
                    Query_13039  91   AGTGGATTGGCCGTGTTAAAAGCACGGATGATGGTGGGACAACAGACTACGCTGCACCCGTAAAAGGCAGATTTACTGTCTCAAGAGATG  180
V  93.4% (239/256)  IGHV3-15*01  137  .....G........A.........AAAC.................................G...........C..CA............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT-----------------------------------------------------><-------------------C
                                      D  S  K  K  H  A  V  S  A  N  E  Q  P  E  N  R  G  H  S  R  V  L  L  Y  H  S  S  P  Q  L  
                    Query_13039  181  ATTCAAAAAAACATGCTGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACCACAGTTCCCCCCAGCTAC  270
V  93.4% (239/256)  IGHV3-15*01  227  ....-........C..............................................................--------------  301
                                      D  S   K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                
D  100.0% (10/10)   IGHD4-17*01  4    --------------------------------------------------------------------------------------....  7

                                      DR3-IMGT------------------>                                  
                                      R  *  Q  I  R  C  F  *  Y  L  G  P  R  D  K  G  H  R  L  F   
                    Query_13039  271  GGTGACAGATACGGTGCTTTTGATATCTGGGGCCAAGGGACAAAGGTCACCGTCTCTTCAG  331
D  100.0% (10/10)   IGHD4-17*01  8    ......-------------------------------------------------------  13
J  97.9% (46/47)    IGHJ3*02     4    --------------.............................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_323335

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           308     4e-86
IGHD5-12*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACCCCTCGGGA	TGGCTAC	AATCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATACCCCTCGGGATGGCTACAATCCTTTTGACTAC	VRDTPRDGYNPFDY	237	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	20	23	4	4	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	107	7	0	93.9
CDR3-IMGT (germline)	237	244	8	6	2	0	75
Total	N/A	N/A	225	211	14	0	93.8


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  M  F  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  S  D
                    Query_13040  20   GTCTGGATTCATGTTCAGTAGATATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATATGGTCTGA  109
V  93.8% (211/225)  IGHV3-33*01  72   ...........CC........C................................................................A...  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  Y  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  N  K  L  Y  L  E  M  S
                    Query_13040  110  TGGAAGTTATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGAACAAGTTATATCTGGAAATGAG  199
V  93.8% (211/225)  IGHV3-33*01  162  .......A.........................................................A.....C.C.G......C......A  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><----------------CDR3-IMGT--------------->           
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  T  P  R  D  G  Y  N  P  F  D  Y  W  G  R  G
                    Query_13040  200  CAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGTCAGAGATACCCCTCGGGATGGCTACAATCCTTTTGACTACTGGGGCCGGGG  289
V  93.8% (211/225)  IGHV3-33*01  252  ...........................G..........CG.....---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (7/7)     IGHD5-12*01  11   ---------------------------------------------------------.......--------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    ----------------------------------------------------------------------................A...  25

                                                             
                                        I  L  V  T  V  S  S  
                    Query_13040  290  AATCCTGGTCACCGTCTCCTCAG  312
J  95.3% (41/43)    IGHJ4*02     26   ..C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_323334

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            319     2e-89
IGHD1-7*01                                                                                            16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-7*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGCGA	CCGA	GGAACTAC	CAGGATGTTCGAGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGACCGAGGAACTACCAGGATGTTCGAGAATGCTCTTGATATC	AGDRGTTRMFENALDI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	248	8	6	2	0	75
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  G  V  S  G  G  A  I  S  S  S  H  W  W  N  W  V  R  Q  A  P  G  K  G  L 
                    Query_13041  1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGCGGCGCCATCAGCAGCAGTCACTGGTGGAATTGGGTCCGCCAGGCCCCCGGGAAGGGGCTG  90
V  91.1% (226/248)  IGHV4-4*02   49   ...................C.........T...T..........T...A.........G.............C....A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  Q  I  Y  H  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S  K 
                    Query_13041  91   GAGTGGATTGGGCAAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAGGAGTCGAGTCAGCATCTCAATAGACACGTCCAAG  180
V  91.1% (226/248)  IGHV4-4*02   139  ............G..........................................A...........C...A...G......A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       H  Q  F  A  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  D  R  G  T  T  R  M  F 
                    Query_13041  181  CACCAGTTCGCCCTGAAGTTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTATTGTGCGGGCGACCGAGGAACTACCAGGATGTTC  270
V  91.1% (226/248)  IGHV4-4*02   229  A........T........C...G...........................G.....C......A.A..----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD1-7*01   10   ------------------------------------------------------------------------........----------  17

                                      ----------------->                                  
                                       E  N  A  L  D  I  W  G  Q  G  T  T  V  I  V  S  S  
                    Query_13041  271  GAGAATGCTCTTGATATCTGGGGCCAAGGGACAACGGTCATCGTCTCTTCAG  322
J  93.8% (45/48)    IGHJ3*02     3    ----.....T........................T.....C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_323333

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           353     9e-100
IGHD3-3*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGCCAATCACA	ATTTTTGGGGTGGTTA	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCGCCAATCACAATTTTTGGGGTGGTTACTTGACTAC	AKDRQSQFLGWLLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13042  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCGGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-30*18  47   .........................................A................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  D  N  I  Y  Y  A  H  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_13042  91   AGTGGGTGGCAGTTATATCATATGATGGGGATAATATATACTATGCACACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.2% (238/250)  IGHV3-30*18  137  ............................AAG.....A..........G.........A................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  T  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  R  Q  S  Q  F  L  
                    Query_13042  181  AAACCTCGCTGTTTCTGCAAATGAATAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGACCGCCAATCACAATTTTTGG  270
V  95.2% (238/250)  IGHV3-30*18  227  .G.A.A......A............C............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD3-3*01   9    ----------------------------------------------------------------------------------........  16

                                      ---------------->                                  
                                      G  W  L  L  D  Y  W  G  Q  G  T  L  V  T  V  T  S  
                    Query_13042  271  GGTGGTTACTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCACCTCAG  321
D  93.8% (15/16)    IGHD3-3*01   17   A.......-------------------------------------------  24
J  97.6% (41/42)    IGHJ4*02     7    ---------...................................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_323332

Length=433
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           344     8e-97
IGHD6-13*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              79.5    5e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCCATCCCGAGGGGGA	AGCAGCAGCTGGTAC	CGAAAGGGGC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCCATCCCGAGGGGGAAGCAGCAGCTGGTACCGAAAGGGGCACTTCTACGCAATGGATGTC	ASPSRGGSSSWYRKGHFYAMDV	310	375	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	120	45	20	4	21	44.4
FR2-IMGT	121	171	51	48	3	0	94.1
CDR2-IMGT	172	195	24	16	8	0	66.7
FR3-IMGT	196	309	114	107	7	0	93.9
CDR3-IMGT (germline)	310	314	5	5	0	0	100
Total	N/A	N/A	314	269	24	21	85.7


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><--------------
                                       Q  V  Q  L  V  Q  S  G  A  E  V  T  K  P  G  S  S  V  K  I  S  C  K  A  S  G  G  T  F  R 
                    Query_13043  1    CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGACGAAGCCTGGGTCCTCGGTGAAGATCTCCTGCAAGGCTTCTGGAGGCACCTTCAGG  90
V  85.7% (269/314)  IGHV1-69*01  1    ..................................A......................G...............................C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      ---CDR1-IMGT-----------------><--------------------FR2-IMGT---------------------><-------C
                                       S  S  G  Y  T  F  G  T  Y  A  M  T  W  V  R  Q  A  P  G  Q  G  L  E  W  I  G  G  I  I  A 
                    Query_13043  91   TCTTCTGGATACACCTTCGGAACTTATGCCATGACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATAGGAGGGATCATCGCC  180
V  85.7% (269/314)  IGHV1-69*01  91   ---------------------.GC.....T..C.G.......................................G............C.T  159
                                                            S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P 

                                      DR2-IMGT------><----------------------------------------------------FR3-IMGT--------------
                                       I  A  G  V  I  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  A  N  T  A  Y  L  E  V 
                    Query_13043  181  ATCGCTGGTGTAATAAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCGGCGAATACAGCCTACTTGGAGGTG  270
V  85.7% (269/314)  IGHV1-69*01  160  ...TT....AC.GC...................................................CA...GC.........A.....C..  249
                                       I  F  G  T  A  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L 

                                      --------------------------------------><----------------------------CDR3-IMGT-------------
                                       S  S  L  R  S  E  D  T  A  V  Y  Y  C  A  S  P  S  R  G  G  S  S  S  W  Y  R  K  G  H  F 
                    Query_13043  271  AGCAGCCTGAGATCTGAGGACACGGCCGTCTATTACTGTGCGAGCCCATCCCGAGGGGGAAGCAGCAGCTGGTACCGAAAGGGGCACTTC  360
V  85.7% (269/314)  IGHV1-69*01  250  .............................G..............----------------------------------------------  293
                                       S  S  L  R  S  E  D  T  A  V  Y  Y  C  A                                                 
D  100.0% (15/15)   IGHD6-13*01  7    ------------------------------------------------------------...............---------------  21
J  92.5% (49/53)    IGHJ6*02     10   -------------------------------------------------------------------------------------...A.  14

                                      -------------->                                 
                                       Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13043  361  TACGCAATGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  408
J  92.5% (49/53)    IGHJ6*02     15   ....GT.....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 42602760


Query= Query_323331

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            400     9e-114
IGHD6-19*01                                                                                           21.8    0.046 
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACC	GGGTGTAGCAATGGCTG	ATTTATC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAACCGGGTGTAGCAATGGCTGATTTATCCTATTACTACGGTCTGGACGTC	AREPGVAMADLSYYYGLDV	273	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	50	0	0	100
CDR1-IMGT	51	80	30	25	5	0	83.3
FR2-IMGT	81	131	51	50	1	0	98
CDR2-IMGT	132	158	27	25	2	0	92.6
FR3-IMGT	159	272	114	110	4	0	96.5
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	280	268	12	0	95.7


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  I  P  R  N  T  D  A  W  N  W  
                    Query_13044  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTATCCCTCGCAACACTGATGCTTGGAACTGGA  90
V  95.7% (268/280)  IGHV6-1*01   26   ...........................................................G..T..A......G..C..............  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      N  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  K  S  K  W  Y  Y  D  Y  A  V  S  V  K  
                    Query_13044  91   ACAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAAGTCCAAGTGGTATTATGATTATGCAGTATCTGTGAAAA  180
V  95.7% (268/280)  IGHV6-1*01   116  T..................................................G.............A........................  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  H  L  S  S  V  T  P  E  D  T  A  V  Y  Y  
                    Query_13044  181  GTCGAATTACCATCAACCCCGACACATCCAAGAACCAGTTCTCCCTGCATCTGAGCTCTGTGACTCCCGAGGACACGGCTGTGTATTACT  270
V  95.7% (268/280)  IGHV6-1*01   206  .......A...........A.............................G....A...................................  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><-----------------------CDR3-IMGT----------------------->                               
                                      C  A  R  E  P  G  V  A  M  A  D  L  S  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  
                    Query_13044  271  GTGCAAGAGAACCGGGTGTAGCAATGGCTGATTTATCCTATTACTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCT  360
V  95.7% (268/280)  IGHV6-1*01   296  ..........--------------------------------------------------------------------------------  305
                                      C  A  R                                                                                   
D  88.2% (15/17)    IGHD6-19*01  1    -------------....A.....G......------------------------------------------------------------  17
J  96.4% (53/55)    IGHJ6*02     8    -------------------------------------...C.........A.......................................  60

                                        
                                      S 
                    Query_13044  361  CA  362
J  96.4% (53/55)    IGHJ6*02     61   ..  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_323330

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGATGGCCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTC	VRQSSDGRTKYGMDV	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	110	4	0	96.5
CDR3-IMGT (germline)	291	298	8	7	1	0	87.5
Total	N/A	N/A	295	280	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  
                    Query_13045  4    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCA  93
V  94.9% (280/295)  IGHV5-51*01  2    ....G.....G.............................C.......................................AG........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  T  G  L  E  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  
                    Query_13045  94   GTTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGTGGATGGGGATCATCTTTCCGGATGACTCTGATACCAGATACA  183
V  94.9% (280/295)  IGHV5-51*01  92   .C..................................A..........................A...T.G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_13045  184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACA  273
V  94.9% (280/295)  IGHV5-51*01  182  ................................................G.....................C...................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                           
                                      T  A  K  Y  Y  C  V  R  Q  S  S  D  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_13045  274  CCGCCAAGTATTATTGTGTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  362
V  94.9% (280/295)  IGHV5-51*01  272  ......T......C....C......----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                   
J  100.0% (42/42)   IGHJ6*02     15   -----------------------------------------------..........................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_132690

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           311     5e-87
IGHD2-21*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGGGGG	ATTGTGATGGT	ATTAACTGCTTCCCCTGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGGATTGTGATGGTATTAACTGCTTCCCCTGGTACTACTATTATGGAATGCACGTC	AKGDCDGINCFPWYYYYGMHV	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	220	21	0	91.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  L  Y  G  G  S  F  S  G  H  Y  W  I  W  L  R  Q  S  P  G  K  G  L  E 
                    Query_13046  1    ACCCTGTCCCTCACCTGCGCTCTCTATGGTGGGTCCTTCAGTGGTCACTACTGGATTTGGCTCCGCCAGTCCCCCGGGAAGGGGCTGGAG  90
V  91.3% (220/241)  IGHV4-34*01  49   .....................G.......................T.........GC...A........C....A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  K  Y  N  S  S  L  K  S  R  V  A  M  S  I  D  A  S  K  S 
                    Query_13046  91   TGGATTGGGGAAATCAATCATAGTGGAAGCACGAAGTACAACTCGTCCCTCAAGAGTCGAGTCGCCATGTCAATAGACGCGTCCAAGAGT  180
V  91.3% (220/241)  IGHV4-34*01  139  ................................C..C......C....................A....A...G.....A.........AC  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  Y  L  K  L  N  S  V  A  A  A  D  T  A  V  Y  Y  C  A  K  G  D  C  D  G  I  N  C  F 
                    Query_13046  181  CAATTCTACCTGAAGCTGAACTCTGTGGCCGCCGCGGACACGGCTGTCTATTACTGTGCGAAGGGGGATTGTGATGGTATTAACTGCTTC  270
V  91.3% (220/241)  IGHV4-34*01  229  ..G....C...........G.......A...................G.............-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (10/11)    IGHD2-21*01  6    -------------------------------------------------------------------......G....------------  16

                                      MGT-------------------------->                                 
                                       P  W  Y  Y  Y  Y  G  M  H  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_13046  271  CCCTGGTACTACTATTATGGAATGCACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  333
J  91.2% (52/57)    IGHJ6*02     6    ------........C..C..T...G...........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_132691

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           294     6e-82
IGHD4-17*01                                                                                           12.2    32   
IGHJ2*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACAGTTTTTCTCCGCCGTCG	GACTAC	TT	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATAACAGTTTTTCTCCGCCGTCGGACTACTTCTTCGATCTC	VRDNSFSPPSDYFFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  K  N  Y  N  M  N  W  V  R  Q  A  P  G  K  R  L  
                    Query_13047  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAAGAACTACAACATGAACTGGGTCCGCCAGGCTCCAGGGAAGCGGCTGG  90
V  87.6% (219/250)  IGHV3-21*01  47   ....................G.....................GT.G...T.G...............................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  G  R  N  N  D  I  H  Y  A  D  S  M  K  G  R  I  T  I  S  R  D  N  A  
                    Query_13047  91   AGTGGGTCTCATCGATTAGAGGTAGAAACAATGACATCCACTACGCAGACTCAATGAAGGGCCGAATCACCATCTCCAGAGACAACGCCA  180
V  87.6% (219/250)  IGHV3-21*01  137  .............C.....TA....T.GT.G.T....AT..............G...........T........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  N  S  L  Y  L  H  M  H  S  L  G  A  E  D  T  A  I  Y  F  C  V  R  D  N  S  F  S  P  P  
                    Query_13047  181  ACAACTCACTCTATCTCCACATGCACAGCCTGGGAGCCGAGGACACGGCTATCTATTTCTGCGTCAGAGATAACAGTTTTTCTCCGCCGT  270
V  87.6% (219/250)  IGHV3-21*01  227  .G........G.....G..A...A........A.................G.G....A...T.CG.....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      T------------------>                                  
                                      S  D  Y  F  F  D  L  W  G  R  G  T  P  V  S  V  S  S  
                    Query_13047  271  CGGACTACTTCTTCGATCTCTGGGGCCGTGGCACCCCAGTCTCTGTCTCCTCAG  324
D  100.0% (6/6)     IGHD4-17*01  2    --......----------------------------------------------  7
J  93.2% (41/44)    IGHJ2*01     10   ----------..........................TG...A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_132692

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           329     3e-92
IGHD6-19*01                                                                                           12.2    33   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCGG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGGAACTGGTTCGACCCC	ARGGWRRQRNWFDP	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	47	4	0	92.2
CDR2-IMGT	126	146	21	18	3	0	85.7
FR3-IMGT	147	260	114	101	13	0	88.6
CDR3-IMGT (germline)	261	268	8	7	1	0	87.5
Total	N/A	N/A	268	239	29	0	89.2


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  F  D  E  S  L  S  G  Y  Y  W  S  W  L  R  
                    Query_13048  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACTTGCGCTGTGTTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCC  90
V  89.2% (239/268)  IGHV4-34*01  26   ........T.......T....................C........C.A..G..G......C.................C...A.C....  115
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  S  H  S  G  S  T  R  Y  N  P  A  L  R  S  R  V  T  
                    Query_13048  91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGGAAATCAGTCATAGTGGAAGTACGAGGTACAACCCGGCCCTCAGGAGTCGAGTCACCA  180
V  89.2% (239/268)  IGHV4-34*01  116  ................G......................A............C..C.AC.........T......A..............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      M  S  V  D  T  S  K  K  Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  I  Y  Y  C  A  R  G  
                    Query_13048  181  TGTCAGTAGACACGTCCAAGAAGCAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTATATATTACTGTGCGCGAGGGG  270
V  89.2% (239/268)  IGHV4-34*01  206  .A....................C..GT...........C..A......T...................G.G............A....--  293
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------------------.  13

                                      -------CDR3-IMGT--------------->                                  
                                      G  W  R  R  Q  R  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13048  271  GCTGGCGAAGACAGCGGAACTGGTTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  336
D  100.0% (6/6)     IGHD6-19*01  14   .....-------------------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    -----------------.............................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_132693

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           353     1e-99
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAT	TTACTTGGATAGCAGTGGT	AATCCTCAGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAATTTACTTGGATAGCAGTGGTAATCCTCAGGACGGTATGGACGTC	AREIYLDSSGNPQDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13049  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-21*01  47   .....................................C......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  N  D  N  A  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13049  91   AGTGGGTCTCATCCATTAGTAATGATAATGCTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-21*01  137  .....................G.AG..G.AG...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  R  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  I  Y  L  D  S  S  
                    Query_13049  181  AGAACTCACTGTATCTGCGAATGAACAGCCTGAGAGCCGACGACACGGCTGTTTATTACTGTGCGAGAGAAATTTACTTGGATAGCAGTG  270
V  95.2% (238/250)  IGHV3-21*01  227  ..................A.....................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.2% (16/19)    IGHD3-22*01  4    -------------------------------------------------------------------------.....AT.....T....  20

                                      IMGT--------------------->                                 
                                      G  N  P  Q  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13049  271  GTAATCCTCAGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  84.2% (16/19)    IGHD3-22*01  21   ..---------------------------------------------------------  22
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_132694

Length=430
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     5e-116
IGHD3-9*01                                                                                            12.2    40    
IGHJ6*02                                                                                              108     1e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	ACGGGCCCCA	ATTTCGATA	GCACTTCGGAACGCTGGGGCCGACGAAAGAAAATATC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAACGGGCCCCAATTTCGATAGCACTTCGGAACGCTGGGGCCGACGAAAGAAAATATCACTACTACTACAACGGTATGGACGTC	ARQRAPISIALRNAGADERKYHYYYNGMDV	284	373	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  E  S  L  K  I  S  C  K  G  S  G  S  G  F  N  T  Y
                    Query_13050  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATCCGGCTTTAACACGTA  90
V  94.8% (276/291)  IGHV5-51*01  6    ...............................A..........................................A.A......C..GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  D  W  M  G  I  I  Y  V  D  D  S  D  T  T  Y  S  P
                    Query_13050  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGACTGGATGGGGATCATCTATGTTGATGACTCTGATACCACATACAGCCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ........G.................................G..................CC..G..............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  A  Q  G  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13050  181  GTCCTTCCAAGCCCAGGGCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTTAAGGCCTCGGACACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  ...........G.....T......................................................G.................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------------------------CDR3-IMGT---------------------------
                                        M  Y  Y  C  A  R  Q  R  A  P  I  S  I  A  L  R  N  A  G  A  D  E  R  K  Y  H  Y  Y  Y  N
                    Query_13050  271  CATGTATTACTGTGCGAGACAACGGGCCCCAATTTCGATAGCACTTCGGAACGCTGGGGCCGACGAAAGAAAATATCACTACTACTACAA  360
V  94.8% (276/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  88.9% (8/9)      IGHD3-9*01   3    -------------------------------...A.....--------------------------------------------------  11
J  98.3% (58/59)    IGHJ6*02     4    -----------------------------------------------------------------------------...........T.  16

                                      ------------>                                 
                                        G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13050  361  CGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  406
J  98.3% (58/59)    IGHJ6*02     17   ..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 42287184


Query= Query_132695

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           339     2e-95
IGHD3-3*01                                                                                            14.1    8.5  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	CTG	TTTTTGG	CGCAGCGAATTATA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCTGTTTTTGGCGCAGCGAATTATAACTTCGGTATGGACGTC	ARAVFGAANYNFGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  W  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13051  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGGTATTGGATACACTGGGTCCGTCAAGCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-74*01  47   ..............................................C..C.....G...........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  H  I  N  S  D  G  S  T  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13051  91   TTTGGGTCTCACATATTAACAGTGATGGGAGTACCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.6% (233/249)  IGHV3-74*01  137  .G..........G......T.............G.....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  L  N  R  L  R  A  G  D  T  A  V  Y  Y  C  A  R  A  V  F  G  A  A  N  
                    Query_13051  181  AGAATACCCTGTATCTACAATTGAACAGGCTGAGAGCCGGGGACACGGCTGTCTATTACTGTGCAAGAGCTGTTTTTGGCGCAGCGAATT  270
V  93.6% (233/249)  IGHV3-74*01  227  ....C..G........G...A.......T..........A............G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-3*01   10   ------------------------------------------------------------------------.......-----------  16

                                      T------------------>                                 
                                      Y  N  F  G  M  D  V  W  G  Q  G  S  T  V  T  V  S  S 
                    Query_13051  271  ATAACTTCGGTATGGACGTCTGGGGCCAAGGGTCCACGGTCACCGTCTCCTCA  323
J  96.0% (48/50)    IGHJ6*02     13   ---...A.........................A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_132696

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           406     1e-115
IGHD1-1*01                                                                                            10.3    133   
IGHJ5*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGCAC	CCAACCCCGATGGCA	ACAAC	CTA	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGCACCCAACCCCGATGGCAACAACCTACC	STQPRWQQPT	290	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	175	30	28	2	0	93.3
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	294	5	4	1	0	80
Total	N/A	N/A	294	277	17	0	94.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  T  S  G  F  I  F  S  T  T
                    Query_13052  1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGGTAAAGCCTGGGGGGTCCCTTAGACTCTCCTGTGCAACCTCTGGATTCATTTTCAGTACCAC  90
V  94.2% (277/294)  IGHV3-15*01  6    ..........G.......G.............................................G............C........A.G.  95
                                        Q  L  V  E  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A

                                      ---><--------------------FR2-IMGT---------------------><----------CDR2-IMGT---------><----
                                        W  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  I  D  G  E  T  T  D  Y
                    Query_13052  91   CTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATTAAAAGCAAAATTGATGGTGAGACAACAGACTA  180
V  94.2% (277/294)  IGHV3-15*01  96   ........G...........................................................C........G............  185
                                        W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y

                                      ------------------------------------------------FR3-IMGT----------------------------------
                                        A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  E  T  E  D
                    Query_13052  181  CGCTGCACCCGTGAAGGGCAGATTCACCATCTCAAGAGATGATTCAAAAAACACGCTGTATTTGCAAATGAACAGCCTGGAAACCGAGGA  270
V  94.2% (277/294)  IGHV3-15*01  186  ...............A.............................................C.................A..........  275
                                        A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D

                                      ------------------><----------CDR3-IMGT--------->                                  
                                        T  A  L  S  Y  C  S  T  Q  P  R  W  Q  Q  P  T  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13052  271  CACAGCCCTTTCCTACTGTAGCACCCAACCCCGATGGCAACAACCTACCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  94.2% (277/294)  IGHV3-15*01  276  .......G.G.AT.......C...-----------------------------------------------------------  299
                                        T  A  V  Y  Y  C  T  T                                                           
D  100.0% (5/5)     IGHD1-1*01   4    ---------------------------------------.....---------------------------------------  8
J  100.0% (36/36)   IGHJ5*02     16   -----------------------------------------------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_323338

Length=410
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            410     1e-116
IGHD2-2*02                                                                                            16.1    2.7   
IGHJ6*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCGACGACTGTACTACTTCCCC	CTGCTATA	GCGACTATC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGACGACTGTACTACTTCCCCCTGCTATAGCGACTATCACTACTTCGGTTTGGACGTC	ARVDDCTTSPCYSDYHYFGLDV	289	354	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	294	278	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  T  F  T  
                    Query_13053  2    AGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGACTTCTGGATACACCTTCACTA  91
V  94.6% (278/294)  IGHV1-3*01   2    ..........T..G......................................................G.....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  A  I  H  W  V  R  Q  A  P  G  Q  S  L  E  W  M  G  W  I  N  A  A  N  G  H  T  K  Y  
                    Query_13053  92   ACTATGCTATACATTGGGTGCGCCAGGCCCCCGGACAAAGTCTTGAGTGGATGGGGTGGATCAACGCTGCCAATGGCCACACAAAATATT  181
V  94.6% (278/294)  IGHV1-3*01   92   G.........G.............................G..............A.............G......TA............  181
                                      S  Y  A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  Q  N  F  Q  G  R  V  T  I  S  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  T  S  E  D  
                    Query_13053  182  CACAGAACTTCCAGGGCAGAGTCACCATTTCCAGGGACACATCCGCGAGCACAGCCTACATGGAGCTGAGCAGCCTGACATCTGAGGACG  271
V  94.6% (278/294)  IGHV1-3*01   182  .......G.....................A................................................G......A...A  271
                                      S  Q  K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><----------------------------CDR3-IMGT--------------------------->       
                                      A  A  V  Y  Y  C  A  R  V  D  D  C  T  T  S  P  C  Y  S  D  Y  H  Y  F  G  L  D  V  W  G  
                    Query_13053  272  CGGCTGTCTATTACTGTGCGAGAGTCGACGACTGTACTACTTCCCCCTGCTATAGCGACTATCACTACTTCGGTTTGGACGTCTGGGGCC  361
V  94.6% (278/294)  IGHV1-3*01   272  .......G................------------------------------------------------------------------  295
                                      T  A  V  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD2-2*02   22   ----------------------------------------------........------------------------------------  29
J  96.2% (51/53)    IGHJ6*02     10   ---------------------------------------------------------------......A....A...............  36

                                                                
                                      Q  G  T  T  V  T  V  S  S 
                    Query_13053  362  AAGGGACCACGGTCACCGTCTCCTCA  387
J  96.2% (51/53)    IGHJ6*02     37   ..........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40183344


Query= Query_176043

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           307     1e-85
IGHD4-17*01                                                                                           14.1    8.5  
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGAATAC	AG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGAATACAGCAACTGGGTCGACCCC	ARDSGEYSNWVDP	252	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	137	27	19	2	6	70.4
FR3-IMGT	138	251	114	105	9	0	92.1
CDR3-IMGT (germline)	252	259	8	8	0	0	100
Total	N/A	N/A	256	228	22	6	89.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  D  S  V  S  S  G  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  
                    Query_13054  4    CCCTGAGACTCTCCTGCAGTGTCTCTGGTGACTCCGTCAGCAGTGGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGGC  93
V  89.1% (228/256)  IGHV4-61*01  50   .....TCC...A......C...........G.............................G...........................A.  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><--------CDR2-IMGT--------><---------------------------------------------
                                      L  E  W  I  G  H  I  Y  N  Y  N  R  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  
                    Query_13054  94   TGGAGTGGATCGGTCATATCTATAACTATAACAGAGGGAGCACCAATTATAATCCCTCCCTCCAAAGTCGAGTCACCATATCAGTAGACA  183
V  89.1% (228/256)  IGHV4-61*01  140  ..........T..GT........T..------..T...........C..C..C.........A.G.........................  223
                                      L  E  W  I  G  Y  I  Y  Y        S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  G  E  Y  
                    Query_13054  184  CATCCAAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATTCCGGTGAATACA  273
V  89.1% (228/256)  IGHV4-61*01  224  .G........................C...G...........................G.................--------------  299
                                      T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                 
D  90.0% (9/10)     IGHD4-17*01  7    -------------------------------------------------------------------------------......C...-  16

                                      GT-------------->                                  
                                      S  N  W  V  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13054  274  GCAACTGGGTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  98.0% (49/50)    IGHJ5*02     2    -.......T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_176045

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           302     3e-84
IGHD5-12*01                                                                                           14.1    8.7  
IGHJ4*02                                                                                              46.8    3e-09


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGATAGAT	GTGGATTTAG	GCAACACGCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGATAGATGTGGATTTAGGCAACACGCCTGACTTC	ARAPIDVDLGNTPDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	221	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  R  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13055  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTTTCATTCAGGAGTTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  88.8% (221/249)  IGHV3-74*01  47   ..................................CA.C.....T..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  A  R  I  D  S  Y  G  S  D  T  F  Y  A  G  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13055  91   TTTGGGTCGCGCGTATTGATAGTTACGGAAGTGACACCTTCTATGCGGGCTCCGTGAAGGGCCGGTTCACAATCTCCAGAGACAACGCCG  180
V  88.8% (221/249)  IGHV3-74*01  137  .G......T.A......A.....G.T..G...AG...AAG...C....A...............A.....C..................A  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  T  L  S  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  F  C  A  R  A  P  I  D  V  D  L  
                    Query_13055  181  AGAACACGCTGTCTCTGCAGATGAACAGTCTGAGAGTCGACGACACGGCTGTGTATTTCTGTGCGAGAGCCCCGATAGATGTGGATTTAG  270
V  88.8% (221/249)  IGHV3-74*01  227  ............A......A................C...G................A......A....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD5-12*01  1    --------------------------------------------------------------------------------......A...  10

                                      ---------------->                                
                                      G  N  T  P  D  F  W  G  Q  G  V  L  V  S  V  S  S
                    Query_13055  271  GCAACACGCCTGACTTCTGGGGCCAGGGGGTCCTGGTCTCCGTCTCCTC  319
J  87.2% (34/39)    IGHJ4*02     8    ----------.....A............AAC.......A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_176044

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           349     2e-98
IGHD3-22*01                                                                                           23.8    0.011
IGHJ2*01                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCAT	TATTTCCATGATAGTCGTGGT	G	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCATTATTTCCATGATAGTCGTGGTGACTGGTACTTCGATCTC	ARDHYFHDSRGDWYFDL	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13056  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.1% (235/247)  IGHV3-53*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  H  R  D  G  K  T  D  Y  A  V  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_13056  91   AGTGGGTCTCAGTTATTCATAGGGATGGAAAAACAGACTATGCAGTCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  95.1% (235/247)  IGHV3-53*01  137  .................T....C.G...T.GC...T....C....A............................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><--------------------CDR3-IMGT-
                                      N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  H  Y  F  H  D  S  R  
                    Query_13056  181  ACACTGTGTATCTTCAAATGAACAGCCTGCGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGACCATTATTTCCATGATAGTCGTG  270
V  95.1% (235/247)  IGHV3-53*01  227  ....GC.......................A.....................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  85.7% (18/21)    IGHD3-22*01  2    -----------------------------------------------------------------------....A.T........A...  20

                                      ------------------->                                  
                                      G  D  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_13056  271  GTGACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  85.7% (18/21)    IGHD3-22*01  21   ..----------------------------------------------------  22
J  100.0% (51/51)   IGHJ2*01     3    ---...................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_176047

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_13057  1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_13057  91   GAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ...................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_13057  181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13057  271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_176046

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     7e-91
IGHD6-6*01                                                                                            19.9    0.15 
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-6*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCC	AGTATAGAAGATCGTC	GGCTGGT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCAGTATAGAAGATCGTCGGCTGGTTGCTTTTGATATC	ARPSIEDRRLVAFDI	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	225	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  R  G  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  Q 
                    Query_13058  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGGGGTTACTACTGGAGCTGGGTCCGTCAGCCCCCAGGGAAGGGGCTGCAG  90
V  92.6% (225/243)  IGHV4-34*01  49   .........................................T..................A....C.....................G..  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  E  I  N  H  R  G  S  S  Y  H  S  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_13058  91   TGGCTTGGCGAAATCAACCATAGAGGAAGTAGCTATCACAGCCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGTCCAAGAAC  180
V  92.6% (225/243)  IGHV4-34*01  139  ...A....G........T.....T.....C.C.A.CT...A...........................A.....A...............  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  P  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  S  I  E  D  R  R  L  V 
                    Query_13058  181  CAGTTCTCCCCGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGACCCAGTATAGAAGATCGTCGGCTGGTT  270
V  92.6% (225/243)  IGHV4-34*01  229  ..........T....................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  87.5% (14/16)    IGHD6-6*01   2    ------------------------------------------------------------------.......C..C.....--------  17
J  100.0% (47/47)   IGHJ3*02     4    -----------------------------------------------------------------------------------------.  4

                                      ----------->                                  
                                       A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13058  271  GCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  316
J  100.0% (47/47)   IGHJ3*02     5    ..............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_176049

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCTCGCCACAGAA	AGCAGCAGCT	ATAACTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCTCGCCACAGAAAGCAGCAGCTATAACTTACTACTTTGACTAC	ARVSPQKAAAITYYFDY	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	113	1	0	99.1
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	236	7	0	97.1


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  H  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_13059  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTAGTTACCACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  97.1% (236/243)  IGHV4-59*01  50   .....TCC...A....C..............................T..........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_13059  94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  97.1% (236/243)  IGHV4-59*01  140  ..........................................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  P  Q  K  A  A  A  I  
                    Query_13059  184  AGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTCTCGCCACAGAAAGCAGCAGCTATAA  273
V  97.1% (236/243)  IGHV4-59*01  230  ...................C...........................................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD6-13*01  7    ----------------------------------------------------------------------------..........----  16

                                      ---------------->                                  
                                      T  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13059  274  CTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (48/48)   IGHJ4*02     1    ---................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_109876

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           374     7e-106
IGHD5-18*01                                                                                           12.2    31    
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGGAG	G	GGATAC	GGAGGTGCCAGATAAAAGT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTGGAGGGGATACGGAGGTGCCAGATAAAAGT	TGGDTEVPDKS	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	112	2	0	98.2
CDR3-IMGT (germline)	249	255	7	6	1	0	85.7
Total	N/A	N/A	255	247	8	0	96.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  A  W  V  R  Q  A  P  G  K  G  L  
                    Query_13060  1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGGCCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.9% (247/255)  IGHV3-49*04  47   ........................................................AG................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  T  Y  G  G  T  A  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_13060  91   AGTGGGTCGGTTTCATTAGAAGCAAAACTTATGGTGGGACAGCAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  96.9% (247/255)  IGHV3-49*04  137  .......A..................G..............A................................................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  S  K  S  I  A  Y  L  Q  M  D  S  L  K  T  E  D  T  A  V  Y  Y  C  T  G  G  D  T  E  V  
                    Query_13060  181  ATTCCAAAAGCATCGCCTATCTGCAAATGGACAGCCTGAAAACCGAGGACACAGCCGTGTATTATTGTACTGGAGGGGATACGGAGGTGC  270
V  96.9% (247/255)  IGHV3-49*04  227  .............................A..................................C......A...---------------  301
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (6/6)     IGHD5-18*01  3    ----------------------------------------------------------------------------......--------  8

                                      ---------->                                  
                                      P  D  K  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13060  271  CAGATAAAAGTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (34/34)   IGHJ4*02     15   -----------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_109875

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD1-26*01                                                                                           10.3    121  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	GGGAG	GATCCAGGCAGGGTTTTG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGGGAGGATCCAGGCAGGGTTTTGACTACTTTGACTAC	AKEGGSRQGFDYFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  S  F  S  N  N  D  M  N  W  V  R  Q  A  P  G  E  G  L  
                    Query_13061  1    GGTCCCTGAGACTCTCCTGTGCAACGTCTGGATTCAGTTTTAGCAACAATGACATGAACTGGGTCCGCCAGGCTCCCGGGGAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-23*01  47   .......................G.C..........CC.......G.T...C.....G..................A...A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  G  I  S  H  N  G  G  F  R  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_13061  91   AGTGGATCTCAGGGATTAGTCATAATGGTGGTTTCAGATATTACGCAGACTCCGTGAGGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  90.4% (226/250)  IGHV3-23*01  137  .....G......CT......GG..G.......AG..C...C................A................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  M  A  V  Y  Y  C  A  K  E  G  G  S  R  Q  G  
                    Query_13061  181  AGAACACCCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACATGGCCGTGTATTACTGTGCGAAAGAGGGAGGATCCAGGCAGGGTT  270
V  90.4% (226/250)  IGHV3-23*01  227  .......G.....................................C......A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD1-26*01  9    ----------------------------------------------------------------------.....---------------  13

                                      ---------------->                                
                                      F  D  Y  F  D  Y  W  G  P  G  T  L  V  T  V  A  S
                    Query_13061  271  TTGACTACTTTGACTACTGGGGCCCGGGAACCCTGGTCACCGTCGCCTC  319
J  95.7% (44/46)    IGHJ4*02     1    ---.....................A...................T....  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_109872

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           310     1e-86
IGHD5-12*01                                                                                           12.2    30   
IGHJ4*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCC	GTGGAT	TAAGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCGTGGATTAAGCTTC	ATRGLSF	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  D  M  N  W  L  R  Q  A  P  G  K  G  P  
                    Query_13062  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACTTTCAGTAATTACGACATGAACTGGCTCCGCCAGGCTCCTGGGAAGGGGCCGG  90
V  90.2% (222/246)  IGHV3-48*03  47   .....................C...............C.......G...T..A.........G.............A..........T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  D  I  T  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_13062  91   AGTGGGTCTCATCCATTAGTAGTCGTGGAGATATCACATACTACGCGGACTCAGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.2% (222/246)  IGHV3-48*03  137  .......T....A..........A....TAG..C..T.........A.....T...A.................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  S  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  T  R  G  L  S  F  W  G  
                    Query_13062  181  AGAACTCACTGTCCCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTCTTTATTACTGTGCGACCCGTGGATTAAGCTTCTGGGGCC  270
V  90.2% (222/246)  IGHV3-48*03  227  ............AT......................C...G.........G...............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD5-12*01  1    ---------------------------------------------------------------------......---------------  6
J  91.4% (32/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  A  Q  V  P  V  S  S  
                    Query_13062  271  AGGGAGCCCAGGTCCCCGTCTCCTCAG  297
J  91.4% (32/35)    IGHJ4*02     22   .....A...T....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_109873

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            304     1e-84
IGHD3-10*01                                                                                           12.2    32   
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GGGGAG	GGGGAATG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGAGGGGGAATGTACTACTACCACGGTTTGGACGTG	ARGGGGMYYYHGLDV	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	24	3	3	80
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	224	23	3	89.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  V  I  S  G  D  S  V  S  S  T  T  N  W  W  T  W  V  R  Q  P  P  G  K  G 
                    Query_13063  1    ACCCTGTCCCTCACCTGCGTTATCTCTGGTGACTCCGTCAGCAGTACGACTAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGG  90
V  89.6% (224/250)  IGHV4-4*02   49   ...................C.G.........G....A.........G---...........G............................  135
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S     N  W  W  S  W  V  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       P  Q  C  I  G  E  I  L  H  T  G  S  T  N  Y  D  P  S  L  K  S  R  V  T  I  S  I  H  K  S 
                    Query_13063  91   CCGCAATGTATTGGGGAAATCCTTCATACTGGGAGTACCAACTACGACCCGTCCCTCAAGAGTCGAGTCACCATATCAATACACAAGTCC  180
V  89.6% (224/250)  IGHV4-4*02   136  .T.G.G..G............TA.....G......C.........A................................G..G........  225
                                       L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       E  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  G  M  Y  Y 
                    Query_13063  181  GAGAATCAGTTTTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCGGTGTATTACTGTGCGCGAGGGGGAGGGGGAATGTACTAC  270
V  89.6% (224/250)  IGHV4-4*02   226  A....C.....C.............G........................C...............A...--------------------  295
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01  16   ----------------------------------------------------------------------......--------------  21
J  94.7% (54/57)    IGHJ6*02     6    ------------------------------------------------------------------------------------......  11

                                      ----------------->                                 
                                       Y  H  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13063  271  TACCACGGTTTGGACGTGTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  321
J  94.7% (54/57)    IGHJ6*02     12   ...T.....A.......C.................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_109870

Length=319
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     4e-95
IGHD1-1*01                                                                                            10.3    112  
IGHJ1*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TG	ACGAC	CTAA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGACGACCTAAAC	AKDDDLN	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  N  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13064  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATAACTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-23*01  47   .........................................AGC.G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  S  G  S  G  V  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13064  91   AGTGGGTCTCAACCATTAGTGGTAGTGGAGTTACCACATACTATGCAGACTCCGTAAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  ...........G.T..............T.G..G.........C...........G..................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  D  D  L  N  W  G  
                    Query_13064  181  AGAGCACGCTGTACCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTTTATTACTGCGCGAAAGATGACGACCTAAACTGGGGCC  270
V  93.2% (233/250)  IGHV3-23*01  227  ...A.........T..........................G...........A........T........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD1-1*01   13   ------------------------------------------------------------------------.....-------------  17
J  100.0% (36/36)   IGHJ1*01     17   ---------------------------------------------------------------------------------.........  25

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_13064  271  AGGGCACCCTGGTCACCGTCTCCTCAG  297
J  100.0% (36/36)   IGHJ1*01     26   ...........................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30832572


Query= Query_109871

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           453     1e-129
IGHJ5*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	N/A	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TCAGGGATCGCATCTAGGA	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGATCGCATCTAGGATGGTTCGACCCC	ARDQGSHLGWFDP	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	74	1	0	98.7
CDR1-IMGT	79	102	24	24	0	0	100
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	112	2	0	98.2
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	296	293	3	0	99


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_13065  4    CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  93
V  99.0% (293/296)  IGHV1-69*12  1    ...........G..............................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 
                    Query_13065  94   AGCTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTAC  183
V  99.0% (293/296)  IGHV1-69*12  91   ..........................................................................................  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  I  A  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_13065  184  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCATAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGAC  273
V  99.0% (293/296)  IGHV1-69*12  181  ....................................................C.....................................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  Y  C  A  R  D  Q  G  S  H  L  G  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_13065  274  ACGGCCGTCTATTACTGTGCGAGAGATCAGGGATCGCATCTAGGATGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  363
V  99.0% (293/296)  IGHV1-69*12  271  ........G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
J  100.0% (46/46)   IGHJ5*02     6    ---------------------------------------------.............................................  50

                                       
                                       
                    Query_13065  364  G  364
J  100.0% (46/46)   IGHJ5*02     51   .  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_109878

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_13066  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................AG....T..............A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13066  91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.4% (228/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_13066  181  CAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.4% (228/244)  IGHV4-59*01  229  ...............C...G...........................G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_13066  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_321798

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     3e-91
IGHD3-3*01                                                                                            21.8    0.040
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGCCTCGTGCCTG	GGAGTGGTTAT	GAAGCCATACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGCCTCGTGCCTGGGAGTGGTTATGAAGCCATACCTGACTAC	AKSLVPGSGYEAIPDY	232	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	11	0	0	100
CDR1-IMGT	19	42	24	23	1	0	95.8
FR2-IMGT	43	93	51	47	4	0	92.2
CDR2-IMGT	94	117	24	22	2	0	91.7
FR3-IMGT	118	231	114	110	4	0	96.5
CDR3-IMGT (germline)	232	237	6	6	0	0	100
Total	N/A	N/A	230	219	11	0	95.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  L  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  E  R  V  S  G  I  
                    Query_13067  8    GTGCAGCCTCTGGATTCACCCTTAGCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAACGGGTCTCAGGTATTA  97
V  95.2% (219/230)  IGHV3-23*01  65   ....................T..................G.................................GT.........C.....  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  G  D  T  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  S  K  S  T  L  Y  L  
                    Query_13067  98   GTGGTAGTGGTGGTGACACATACTACGCAGACGCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAGCACGCTGTATCTGC  187
V  95.2% (219/230)  IGHV3-23*01  155  ..............AG................T..........................................A..............  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  N  S  L  R  G  E  D  T  A  V  Y  F  C  A  K  S  L  V  P  G  S  G  Y  E  A  I  P  D  
                    Query_13067  188  AAATGAACAGCCTGAGAGGCGAGGACACGGCCGTATATTTCTGTGCGAAAAGCCTCGTGCCTGGGAGTGGTTATGAAGCCATACCTGACT  277
V  95.2% (219/230)  IGHV3-23*01  245  ..................C....................A..........----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (11/11)   IGHD3-3*01   15   ---------------------------------------------------------------...........----------------  25
J  100.0% (39/39)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                
                                      Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13067  278  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  311
J  100.0% (39/39)   IGHJ4*02     13   ..................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_320440

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           344     6e-97
IGHD6-13*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGTGGTGT	CAGCAGCTGGTAC	GGGCCGGCC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTGGTGTCAGCAGCTGGTACGGGCCGGCCGACTAC	ARGGGVSSWYGPADY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  V  T  R  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13068  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGCTCACCGTCACTAGGAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.7% (233/246)  IGHV3-53*01  47   ................................T.........G...C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  T  G  G  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  S  S  K  
                    Query_13068  91   AGTGGGTCTCAGTTATTTATACCGGTGGAAGCACATACTATTCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  94.7% (233/246)  IGHV3-53*01  137  .....................G......T...........CG.......................................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------CDR3-IMGT----
                                      N  T  L  L  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  G  V  S  S  W  Y  
                    Query_13068  181  ACACACTACTTCTTCAGATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGGGGGTGGTGTCAGCAGCTGGTACG  270
V  94.7% (233/246)  IGHV3-53*01  227  ....G..GTA......A.................................................------------------------  292
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (13/13)   IGHD6-13*01  9    ----------------------------------------------------------------------------.............-  21

                                      ------------->                                  
                                      G  P  A  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13068  271  GGCCGGCCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (40/40)   IGHJ4*02     9    --------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_320441

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           408     4e-116
IGHD5-12*01                                                                                           14.1    9.9   
IGHJ3*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTCCGTTTCGTAGAGATGC	CTACAATTAC	CGGACCACC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTCCGTTTCGTAGAGATGCCTACAATTACCGGACCACCGATGCTTTTGATATC	ARDRPFRRDAYNYRTTDAFDI	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  T  V  S  C  K  A  S  G  G  T  F  S  S  F
                    Query_13069  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGACGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTT  90
V  94.8% (276/291)  IGHV1-69*01  6    ..................G...............................A......................................A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        I  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  F  I  P  T  F  G  T  T  N  S  A  Q
                    Query_13069  91   TATTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGTTCATCCCTACCTTTGGCACAACAAACTCCGCACA  180
V  94.8% (276/291)  IGHV1-69*01  96   .GC....................................................A.........T......T...G......A......  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  V  S  T  S  T  A  Y  M  V  L  S  S  L  T  S  A  D  T  A
                    Query_13069  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGTTTCCACGAGCACAGCCTACATGGTGCTGAGCAGCCTGACATCTGCGGACACGGC  270
V  94.8% (276/291)  IGHV1-69*01  186  ...................................AA......................A..............G.....A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------------CDR3-IMGT-------------------------->              
                                        V  Y  Y  C  A  R  D  R  P  F  R  R  D  A  Y  N  Y  R  T  T  D  A  F  D  I  W  G  Q  G  T
                    Query_13069  271  CGTGTATTACTGTGCGAGAGATCGTCCGTTTCGTAGAGATGCCTACAATTACCGGACCACCGATGCTTTTGATATCTGGGGCCAAGGGAC  360
V  94.8% (276/291)  IGHV1-69*01  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  90.0% (9/10)     IGHD5-12*01  14   ------------------------------------------....G.....--------------------------------------  23
J  100.0% (49/49)   IGHJ3*02     2    -------------------------------------------------------------.............................  30

                                                          
                                        M  V  T  V  S  S  
                    Query_13069  361  AATGGTCACCGTCTCTTCAG  380
J  100.0% (49/49)   IGHJ3*02     31   ....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_94575

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGTCGTATTCTTT	TGATAGTAGTGGT	CAGAGTCCCGCG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGTCGTATTCTTTTGATAGTAGTGGTCAGAGTCCCGCGTACTTTGACTAC	ARDLSYSFDSSGQSPAYFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13070  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  C  I  S  G  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13070  91   AGTGGGTCTCATGCATCAGTGGTGGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  ............C...T...A..A..................................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  S  Y  S  F  D  
                    Query_13070  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGTCGTATTCTTTTGATA  270
V  98.4% (246/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD3-22*01  10   -------------------------------------------------------------------------------------.....  14

                                      R3-IMGT------------------------>                                  
                                      S  S  G  Q  S  P  A  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_13070  271  GTAGTGGTCAGAGTCCCGCGTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  336
D  100.0% (13/13)   IGHD3-22*01  15   ........----------------------------------------------------------  22
J  97.8% (45/46)    IGHJ4*02     3    --------------------........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_320443

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           367     6e-104
IGHD3-10*01                                                                                           14.1    9.4   
IGHJ2*01                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGCC	ACTATGG	GGATGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATC	ARSHYGDAYWYLDI	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	96	18	0	84.2
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	261	26	0	90.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  I  F  T  S  Y 
                    Query_13071  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACATCTTCACCAGTTAT  91
V  90.9% (261/287)  IGHV1-18*01  7    .................................................................T..........C...T.....C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  F  E  W  M  G  W  I  S  P  Y  N  G  N  T  A  Y  A  E 
                    Query_13071  92   GGAATCACCTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGATGGATCAGCCCTTACAATGGTAACACAGCCTACGCAGAG  181
V  90.9% (261/287)  IGHV1-18*01  97   ..T....G............................C.......................G.................AA...T...C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  F  T  V  A  T  E  T  S  T  N  T  A  F  M  E  L  R  S  L  K  A  H  D  T  A 
                    Query_13071  182  AAGTTCCAGGGCAGATTCACCGTGGCCACAGAGACTTCCACGAACACAGCCTTCATGGAGCTGCGGAGTCTGAAAGCTCACGACACGGCC  271
V  90.9% (261/287)  IGHV1-18*01  187  ...C...........G.....A..A.......C..A.......G........A..........A....C....G.T..G...........  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  S  H  Y  G  D  A  Y  W  Y  L  D  I  W  G  R  G  T  L  V  T  V  S  S  
                    Query_13071  272  GTCTATTACTGTGCGAGGAGCCACTATGGGGATGCCTACTGGTACCTCGATATCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  359
V  90.9% (261/287)  IGHV1-18*01  277  ..G..............-----------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                          
D  100.0% (7/7)     IGHD3-10*01  6    ----------------------.......-----------------------------------------------------------  12
J  96.2% (51/53)    IGHJ2*01     1    -----------------------------------..........T.....C....................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_320444

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         392     2e-111
IGHD1-26*01                                                                                           10.3    138   
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATGCCTCCACCCGTAC	GTGGG	GTTTTC	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGCCTCCACCCGTACGTGGGGTTTTCACAACTGGTTCGACCCC	ARHASTRTWGFHNWFDP	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  N  T  F  T  S  Y
                    Query_13072    1    GCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGAAACACCTTTACCAGCTA  90
V  93.4% (270/289)  IGHV5-10-1*01  6    ........................G................................................T...G............  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  T  D  S  Y  P  D  Y  S  P
                    Query_13072    91   CTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTACTGACTCTTATCCCGACTACAGTCC  180
V  93.4% (270/289)  IGHV5-10-1*01  96   .................................................................G..........A..A.......C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  S  Q  G  H  A  P  I  S  S  D  K  S  I  S  P  A  S  R  Q  G  S  S  L  K  A  S  A  P  A
                    Query_13072    181  GTCCTCCCAAGGCCACGCCCCCATCTCCTCTGACAAGTCCATCAGCCCTGCCTCCCGGCAGGGGAGCAGCCTGAAGGCCTCGGCCCCCGC  270
V  93.4% (270/289)  IGHV5-10-1*01  186  .....T...........T.A.......AG.................A......A..T....T.....................A.A....  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------------CDR3-IMGT-------------------->                          
                                          I  Y  Y  C  A  R  H  A  S  T  R  T  W  G  F  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V
                    Query_13072    271  CATATATTACTGTGCGAGACATGCCTCCACCCGTACGTGGGGTTTTCACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGT  360
V  93.4% (270/289)  IGHV5-10-1*01  276  ...G...............-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD1-26*01    7    ------------------------------------.....-------------------------------------------------  11
J  100.0% (51/51)   IGHJ5*02       1    -----------------------------------------------...........................................  43

                                                
                                          S  S  
                    Query_13072    361  CTCCTCAG  368
J  100.0% (51/51)   IGHJ5*02       44   ........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_320445

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           316     2e-88
IGHD3-16*01                                                                                           18.0    0.61 
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	N/A	TTTGGGGTAGTT	TG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTTGGGGTAGTTTGGATGCCTTCGATATC	AKVWGSLDAFDI	264	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	149	45	23	1	21	51.1
FR3-IMGT	150	263	114	111	3	0	97.4
CDR3-IMGT (germline)	264	270	7	7	0	0	100
Total	N/A	N/A	270	238	11	21	88.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13073  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATGTTCAGTAGCTATGCCATGAACTGGGTCCGCCAGGCGCCAGGGAAGGGGCTGG  90
V  88.1% (238/270)  IGHV3-30*18  47   ....................................CC.............G....C................T.....C..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----------------CDR2-IMGT-----------------><------------------------------
                                      E  W  V  A  I  I  S  F  E  G  S  K  K  S  Y  D  G  S  N  E  Y  Y  A  D  S  V  K  G  R  F  
                    Query_13073  91   AGTGGGTGGCAATTATTTCATTTGAAGGAAGTAAGAAATCATATGATGGAAGTAATGAATACTATGCAGACTCCGTGAAGGGCCGATTCA  180
V  88.1% (238/270)  IGHV3-30*18  137  ...........G....---------------------...................A.................................  205
                                      E  W  V  A  V  I                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  S  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  
                    Query_13073  181  CCATCTCCAGAGACAATTCCAAGAACACGTTGTATCTGCAAATGAGCAGCCTGAGAGTTGAGGACACGGCTGTGTATTACTGTGCGAAAG  270
V  88.1% (238/270)  IGHV3-30*18  206  .............................C...............A...........C................................  295
                                      T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  

                                      -------CDR3-IMGT------------>                                  
                                      V  W  G  S  L  D  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13073  271  TTTGGGGTAGTTTGGATGCCTTCGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  333
D  91.7% (11/12)    IGHD3-16*01  15   .......G....---------------------------------------------------  26
J  95.9% (47/49)    IGHJ3*02     2    --------------.....T..T........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_320446

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           318     6e-89
IGHD6-6*01                                                                                            10.3    121  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCGGCCGCAATGT	GCTCG	CCCAAGACAGGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAAAGTCGGCCGCAATGTGCTCGCCCAAGACAGGTACTACTTTGACTAC	TKVGRNVLAQDRYYFDY	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	24	18	3	3	75
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	249	228	18	3	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  L  G  T  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13074  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCCGGATTCACACTTGGCACCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-23*01  47   .....................C......T........CT..A...G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  G  G  S  G  T     T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13074  91   AGTGGGTCTCAACCATTGGTGGTAGTGGTACTA---CATACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAATTCCA  177
V  91.6% (228/249)  IGHV3-23*01  137  ...........G.T...A...........GG..GCA............................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  T  K  V  G  R  N  V  L  A  
                    Query_13074  178  GGAACACCCTGTATCTGCAAATGAACAGCCTGACAGCCGAGGACACGGCCGTATATTATTGTACGAAAGTCGGCCGCAATGTGCTCGCCC  267
V  91.6% (228/249)  IGHV3-23*01  227  A......G.........................G........................C...G......---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD6-6*01   11   ----------------------------------------------------------------------------------.....---  15

                                      GT-------------------->                                  
                                      Q  D  R  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13074  268  AAGACAGGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (48/48)   IGHJ4*02     1    ---------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_320447

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           304     9e-85
IGHD7-27*01                                                                                           12.2    32   
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TTCCCCTAGGCCCGGTAACCC	CTGGGG	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATTCCCCTAGGCCCGGTAACCCCTGGGGTGACTCC	ARDSPRPGNPWGDS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  E  M  N  W  V  R  Q  V  P  G  K  G  L  
                    Query_13075  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACCTTCAGGAATTATGAGATGAACTGGGTCCGCCAGGTTCCAGGAAAGGGGCTGG  90
V  88.8% (222/250)  IGHV3-48*03  47   ............................T..............T.G......A...................C......G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  S  Y  I  S  I  D  G  D  N  T  L  Y  A  D  S  V  R  G  R  F  T  T  S  R  D  N  A  
                    Query_13075  91   AGTGGCTCTCATACATCAGTATTGATGGTGATAATACACTTTATGCAGACTCTGTGAGGGGCCGATTCACCACGTCCAGAGACAACGCCA  180
V  88.8% (222/250)  IGHV3-48*03  137  .....G.T........T....G.AG....AG..CC.T.TAC..C.............A..............TC................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  S  P  R  P  G  N  
                    Query_13075  181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTATTGTGCGAGGGATTCCCCTAGGCCCGGTAACC  270
V  88.8% (222/250)  IGHV3-48*03  227  ............A.......................C.....................C........A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ------------->                                
                                      P  W  G  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13075  271  CCTGGGGTGACTCCTGGGGCCAGGGGACCTTGGTCACCGTCTCCTC  316
D  100.0% (6/6)     IGHD7-27*01  5    -......---------------------------------------  10
J  92.3% (36/39)    IGHJ4*02     8    -------.....A............A...C................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_320448

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           302     3e-84
IGHD3-10*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCGGAGGTTCC	ACTATGG	CCACCTGACACCAC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCGGAGGTTCCACTATGGCCACCTGACACCACTTGAGTAC	ASRRFHYGHLTPLEY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	217	24	0	90


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  N  W  V  R  Q  T  P  G  R  G  L  E  
                    Query_13076  4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAACTGGGTCCGCCAGACCCCAGGGAGGGGGCTGGAGT  93
V  90.0% (217/241)  IGHV4-34*01  50   .....TCC...A..........................................G....A........C.........A...........  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  E  V  N  H  S  G  N  S  N  S  N  P  P  L  K  S  R  V  P  I  L  V  D  T  S  K  N  
                    Query_13076  94   GGCTTGGGGAAGTCAATCATAGTGGCAACAGCAACTCCAACCCGCCCCTCAAGAGTCGAGTCCCCATATTAGTCGACACGTCCAAGAACC  183
V  90.0% (217/241)  IGHV4-34*01  140  ..A........A.............A.G..C.....A.......T.................A......C...A................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  S  R  R  F  H  Y  G  H  L  T  
                    Query_13076  184  AGTTCTCCCTGAAACTGACTTCTGTGACCGCCGCGGACACGGCTCTTTATTATTGTGCGAGTCGGAGGTTCCACTATGGCCACCTGACAC  273
V  90.0% (217/241)  IGHV4-34*01  230  .............G....GC........................G.G.....C........-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (7/7)     IGHD3-10*01  6    ------------------------------------------------------------------------.......-----------  12

                                      ---------->                                  
                                      P  L  E  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13076  274  CACTTGAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.6% (41/42)    IGHJ4*02     7    ---....C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_320449

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           293     2e-81
IGHD2-21*02                                                                                           12.2    32   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGGGAAATCCAGGATCGAACCCTGA	GACTGC	AAGTTTTTAGTTGGCTAAAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGGGAAATCCAGGATCGAACCCTGAGACTGCAAGTTTTTAGTTGGCTAAAGTAC	AREGEIQDRTLRLQVFSWLKY	230	292	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	23	1	0	95.8
FR2-IMGT	41	91	51	48	3	0	94.1
CDR2-IMGT	92	115	24	18	6	0	75
FR3-IMGT	116	229	114	105	9	0	92.1
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	206	19	0	91.6


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  I  A  R  Y  E
                    Query_13077  13   GTCTGGATTCACCTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTTGGAATTGCACGGTATGA  102
V  91.6% (206/225)  IGHV3-33*01  72   ....................G...................................................G.C.G..AT.T.......  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        A  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  K  T  L  Y  L  Q  M  N
                    Query_13077  103  AGCAAGTAATACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATATCCAGAGACAATTCCAGGAAGACCCTATATCTGCAAATGAA  192
V  91.6% (206/225)  IGHV3-33*01  162  T.G........A......T.............................C................A...C..G..G..............  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------------------CDR3-IMGT-----------------
                                        S  L  R  A  D  D  T  A  M  Y  Y  C  A  R  E  G  E  I  Q  D  R  T  L  R  L  Q  V  F  S  W
                    Query_13077  193  CAGCCTCAGAGCCGATGACACGGCTATGTATTACTGTGCGAGAGAGGGGGAAATCCAGGATCGAACCCTGAGACTGCAAGTTTTTAGTTG  282
V  91.6% (206/225)  IGHV3-33*01  252  ......G........G.........G...................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (6/6)     IGHD2-21*02  17   -----------------------------------------------------------------------......-------------  22

                                      --------->                                  
                                        L  K  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13077  283  GCTAAAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  326
J  100.0% (37/37)   IGHJ4*02     12   -------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_27820

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         344     7e-97
IGHD3-9*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAGGGGA	ACGATATTTTGGCTGG	GGTCCTGGACCCACC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATAAGGGGAACGATATTTTGGCTGGGGTCCTGGACCCACCCTACGACTACTACGGTATGGACGTC	ARDKGNDILAGVLDPPYDYYGMDV	246	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  I  N  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_13078    4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCAACAGTGGTAGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  94.0% (235/250)  IGHV4-30-4*01  50   .....TCC...A.....A.....................G.......GA.........................................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  Y  R  G  R  A  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  
                    Query_13078    94   TGGAGTGGATTGGGTACATCTATTACCGTGGGCGCGCCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCATTAGACACGTCCA  183
V  94.0% (235/250)  IGHV4-30-4*01  140  ..........................A.....A..A.........................................G............  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><---------------------------
                                        K  N  Q  F  S  L  K  L  Y  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  K  G  N  D  I  L  
                    Query_13078    184  AGAACCAGTTCTCCCTGAAGCTGTACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGATAAGGGGAACGATATTTTGG  273
V  94.0% (235/250)  IGHV4-30-4*01  230  .......................AG.........T...................................--------------------  299
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  93.8% (15/16)    IGHD3-9*01     6    ------------------------------------------------------------------------------...........A  17

                                        ----CDR3-IMGT------------------------------>                                 
                                        A  G  V  L  D  P  P  Y  D  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_13078    274  CTGGGGTCCTGGACCCACCCTACGACTACTACGGTATGGACGTCTGGGGCCAGGGGACCACGGTCAGCGTCTCCTCA  350
D  93.8% (15/16)    IGHD3-9*01     18   ....-------------------------------------------------------------------------  21
J  94.8% (55/58)    IGHJ6*02       5    -------------------....T............................A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_23447

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           344     6e-97
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGGGGA	AGCAGTGGCTGGTAC	TGGAGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATGGGGGAAGCAGTGGCTGGTACTGGAGTTTTGACTAT	VKDGGSSGWYWSFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  I  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13079  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATATTTATGGCATCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-30*18  47   ..........................................G..GC........G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  V  S  Y  D  G  G  N  K  Y  Y  T  D  S  V  R  G  R  F  S  I  S  R  D  N  S  
                    Query_13079  91   AGTGGGTGGCATTTGTTTCATATGATGGAGGTAATAAATACTATACAGACTCCGTGAGGGGCCGATTCTCCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-30*18  137  ...........G..A.A............A..............G............A..........A.....................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  F  M  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  K  D  G  G  S  S  G  W  
                    Query_13079  181  AGAACACGCTGTTTATGCAAATGAACAGCCTGAGAGCTGACGACACGGCTGTGTATTACTGTGTGAAAGATGGGGGAAGCAGTGGCTGGT  270
V  94.0% (235/250)  IGHV3-30*18  227  ............A.C.........................G......................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD6-19*01  7    -----------------------------------------------------------------------------.............  19

                                      ---------------->                                  
                                      Y  W  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13079  271  ACTGGAGTTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (15/15)   IGHD6-19*01  20   ..-------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    --------........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_94579

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           260     1e-71
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	93	21	0	81.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	205	39	0	84


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_13080  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  84.0% (205/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_13080  91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  84.0% (205/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_13080  181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACGTAT  270
V  84.0% (205/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_13080  271  GTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    ---------------------------------...G....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_94578

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            322     2e-90
IGHD1-26*01                                                                                           12.2    32   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGTTTC	TATAGT	CGCGTTGGCTGCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTTTCTATAGTCGCGTTGGCTGCTTCTTTGACTAC	ARCFYSRVGCFFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  E  F  T  F  S  A  Y  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13081  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGAATTCACCTTTAGTGCCTACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.5% (227/248)  IGHV3-7*01   47   .....................C........G.............AG...T.GG.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  R  H  D  E  T  V  K  T  Y  V  D  S  V  K  G  R  F  T  T  S  R  D  N  A  
                    Query_13081  91   AGTGGGTGGCAAACATAAGGCACGATGAAACTGTGAAAACCTATGTGGACTCTGTGAAGGGCCGATTCACCACGTCCAGAGACAACGCCA  180
V  91.5% (227/248)  IGHV3-7*01   137  ..........C.......A...A....G..G..A....TA................................TC................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  C  F  Y  S  R  V  G  
                    Query_13081  181  AGAACTCACTGTATCTGCAAATGGATAGCCTGAGACCTGAGGACACGGCTGTGTATTACTGTGCGAGATGTTTCTATAGTCGCGTTGGCT  270
V  91.5% (227/248)  IGHV3-7*01   227  .......................A.C.........G.C..............................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------......----------  8

                                      ------------->                                  
                                      C  F  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_13081  271  GCTTCTTTGACTACTGGGGCCAGGGAGCGTTGGTCACCGTCTCCTCAG  318
J  93.2% (41/44)    IGHJ4*02     5    ----......................A.CC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_23441

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           361     5e-102
IGHD3-16*01                                                                                           14.1    9.2   
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	GGGGGA	TTTGGGG	ACTAC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGCGAGGGGGATTTGGGGACTACTTCGACCCC	TRGGFGDYFDP	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	4	2	0	66.7
Total	N/A	N/A	289	260	29	0	90


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  V  T  G  H  N  L  S  S  V
                    Query_13082  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGTGAGTCTCTGAAGATCTCCTGTAAGGTCACTGGACACAACTTAAGCAGTGT  90
V  90.0% (260/289)  IGHV5-51*01  6    .......................................G.........................GTT.....T...G...T.C...CTA  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  I  G  F  I  Y  L  G  D  S  D  T  K  Y  S  P
                    Query_13082  91   CTGGATCACCTGGGTGCGCCAGATGCCCGGAAAAGGCCTGGAGTGGATTGGATTCATCTATCTTGGTGACTCTGATACCAAATACAGCCC  180
V  90.0% (260/289)  IGHV5-51*01  96   .......GG.....................G.................G..GA.........C.................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  N  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13082  181  GTCCTTTCAAGGCCAGGTCACCATGTCAGCCGACAACTCCATCAACACCGCCTACTTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  90.0% (260/289)  IGHV5-51*01  186  ......C.................C...........G.......G..........C..........C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        M  Y  F  C  T  R  G  G  F  G  D  Y  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13082  271  CATGTATTTTTGTACGCGAGGGGGATTTGGGGACTACTTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  350
V  90.0% (260/289)  IGHV5-51*01  276  ........AC...G..A..-------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                              
D  100.0% (7/7)     IGHD3-16*01  15   -------------------------.......------------------------------------------------  21
J  97.7% (42/43)    IGHJ5*02     9    -------------------------------------.......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_83466

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           408     4e-116
IGHD1-1*01                                                                                            10.3    130   
IGHJ5*01                                                                                              52.6    5e-11 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCTG	GGAAC	ACCTGACA	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCTGGGAACACCTGACAACTCC	ARELGTPDNS	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  Q  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  R  Y
                    Query_13083  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGCAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACCAGATA  90
V  94.8% (276/291)  IGHV1-46*01  6    ..................G.........A..........................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  L  I  N  P  S  G  G  S  T  N  Y  A  Q
                    Query_13083  91   CTATATGCACTGGGTGCGGCAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACTAATCAACCCTAGTGGTGGTAGCACGAATTACGCACA  180
V  94.8% (276/291)  IGHV1-46*01  96   ..................A.................................A.........................A.GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  G  D  T  M  T  R  D  T  S  T  S  T  V  F  M  D  R  S  S  L  R  S  E  D  T  A
                    Query_13083  181  GAAGTTCCAGGGCGGAGACACCATGACCAGGGACACGTCCACGAGCACAGTCTTCATGGACCGGAGCAGCCTGAGATCTGAGGACACGGC  270
V  94.8% (276/291)  IGHV1-46*01  186  .............A...T...................................A......G.T...........................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        R  Y  Y  C  A  R  E  L  G  T  P  D  N  S  G  G  Q  G  T  L  V  T  V  P  S  
                    Query_13083  271  CAGGTATTACTGTGCGAGAGAGCTGGGAACACCTGACAACTCCGGGGGCCAGGGAACACTGGTCACCGTCCCCTCAG  347
V  94.8% (276/291)  IGHV1-46*01  276  .GT..................--------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                           
D  100.0% (5/5)     IGHD1-1*01   10   -------------------------.....-----------------------------------------------  14
J  89.7% (35/39)    IGHJ5*01     13   --------------------------------------.....T.......A.....C............T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_117719

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	290	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	71	3	0	95.9
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	294	5	5	0	0	100
Total	N/A	N/A	292	275	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  
                    Query_13084  3    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCA  92
V  94.2% (275/292)  IGHV5-51*01  2    ..G..............................................................A...G............C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  H  W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  
                    Query_13084  93   CCCACTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGATTCTGATACCAGATACA  182
V  94.2% (275/292)  IGHV5-51*01  92   G.T......................G.T..........................G..............G...C................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  H  V  P  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  
                    Query_13084  183  GCCCGTCCTTCCAAGGCCACGTCCCCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACA  272
V  94.2% (275/292)  IGHV5-51*01  182  ...................G...A.....................T.........................A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------CDR3-IMGT--------->                                 
                                      T  A  I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13084  273  CCGCCATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  352
V  94.2% (275/292)  IGHV5-51*01  272  .......G..T...........----------------------------------------------------------  293
                                      T  A  M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ----------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_304723

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            349     2e-98
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	CCC	TTGGAGTGGTTCTTATA	GCGGTATAATAACCAGGGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGCCCTTGGAGTGGTTCTTATAGCGGTATAATAACCAGGGGTGCTTTTCATATT	VSPWSGSYSGIITRGAFHI	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	245	5	4	1	0	80
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  G  V  S  G  G  S  I  S  N  S  Y  W  W  S  W  V  R  Q  P  P  G  K  G  P 
                    Query_13085  1    ACCCTGTCCCTCACCTGCGGTGTCTCTGGTGGCTCCATCAGCAATAGTTATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCCG  90
V  95.5% (234/245)  IGHV4-4*02   49   ...................C.......................G....A.C.....................................T.  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  Y  H  S  G  S  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_13085  91   GAGTGGATTGGGGAAGTCTATCATAGTGGGAGCACCAATTACAACCGGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  95.5% (234/245)  IGHV4-4*02   139  ...............A......................C.......C...........................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       N  H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  V  S  P  W  S  G  S  Y  S  G 
                    Query_13085  181  AACCACTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGTGAGCCCTTGGAGTGGTTCTTATAGCGGT  270
V  95.5% (234/245)  IGHV4-4*02   229  .....G................G......................................C...-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  94.1% (16/17)    IGHD3-3*01   13   --------------------------------------------------------------------...........A.....-----  29

                                      MGT----------------------->                                  
                                       I  I  T  R  G  A  F  H  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13085  271  ATAATAACCAGGGGTGCTTTTCATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  331
J  95.7% (45/47)    IGHJ3*02     4    --------------.......G....C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_304722

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           283     1e-78
IGHD2-21*02                                                                                           23.8    0.010
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGGAACTGGA	GGTGGTGACTGC	CTT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGGAACTGGAGGTGGTGACTGCCTTGACCTC	ARAGTGGGDCLDL	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	47	4	0	92.2
CDR2-IMGT	102	125	24	20	4	0	83.3
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	231	206	25	0	89.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  S  F  S  G  F  G  M  H  W  V  R  Q  A  P  G  R  G  L  E  W  V  A  L  I  
                    Query_13086  16   GTGCAGCGTCTGGATTCAGCTTCAGTGGCTTTGGCATGCATTGGGTCCGCCAGGCTCCAGGCAGGGGCCTGGAGTGGGTGGCACTTATAC  105
V  89.2% (206/231)  IGHV3-33*01  65   ..................C.......A...A.........C......................A...G...............G.....T  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      R  F  D  G  S  N  T  N  Y  A  A  F  A  K  S  R  F  I  I  S  R  D  N  S  K  N  T  M  D  L  
                    Query_13086  106  GGTTTGATGGGAGTAATACAAATTATGCAGCCTTCGCGAAGAGTCGATTCATCATCTCCAGAGACAATTCCAAGAACACGATGGATCTGC  195
V  89.2% (206/231)  IGHV3-33*01  155  ...A......A.......A.T.C.......A..C..T....G.C.......C............................C..T......  244
                                      W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------CDR3-IMGT-------------->       
                                      Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  A  G  T  G  G  G  D  C  L  D  L  W  G  
                    Query_13086  196  AGATGAACAGTCTGAGAGTCGAGGATACGGCTGTGTATTACTGTGCGAGAGCCGGAACTGGAGGTGGTGACTGCCTTGACCTCTGGGGCC  285
V  89.2% (206/231)  IGHV3-33*01  245  .A........C.......C......C.........................---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (12/12)   IGHD2-21*02  11   --------------------------------------------------------------............----------------  22
J  97.5% (39/40)    IGHJ5*02     12   -----------------------------------------------------------------------------....C........  24

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_13086  286  AGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.5% (39/40)    IGHJ5*02     25   ...........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_304720

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           369     2e-104
IGHD2-2*01                                                                                            12.2    37    
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAGCCACAATTAGTCCG	AGTAGT	TT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAGCCACAATTAGTCCGAGTAGTTTCTACTACGGTATGGACGTC	ARDLATISPSSFYYGMDV	290	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	70	5	0	93.3
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	98	16	0	86
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	296	266	30	0	89.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  T  V  S  C  K  S  S  G  Y  T  F  T 
                    Query_13087  2    CAGGTCCAGCTTGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGACGGTCTCCTGCAAGTCTTCTGGGTACACCTTTACC  91
V  89.9% (266/296)  IGHV1-18*04  1    .....T.....G.............C.............................A.............G.......T............  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  D  T  Y  Y 
                    Query_13087  92   AGTTACGGCATCACCTGGGTGCGGCAGGCCCCTGGACAGGGCCTTGAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACATACTAT  181
V  89.9% (266/296)  IGHV1-18*04  91   ..C.....T....G.........A..............A..G.............................C......A.....A.....  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       V  Q  M  V  R  D  R  V  T  M  T  R  N  T  S  T  S  T  V  H  M  E  V  R  G  L  T  S  D  D 
                    Query_13087  182  GTACAGATGGTCCGCGACAGAGTCACCATGACCAGGAATACATCCACGAGCACAGTCCACATGGAGGTGAGGGGCCTGACATCTGACGAC  271
V  89.9% (266/296)  IGHV1-18*04  181  .C.....A.C...AG.G.................CAG.C................C.T........C.....A......G..........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  R  D  L  A  T  I  S  P  S  S  F  Y  Y  G  M  D  V  W  G  Q  G  T  T 
                    Query_13087  272  ACGGCCGTGTATTACTGTGCGAGAGATTTAGCCACAATTAGTCCGAGTAGTTTCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACG  361
V  89.9% (266/296)  IGHV1-18*04  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD2-2*01   11   ---------------------------------------------......---------------------------------------  16
J  100.0% (49/49)   IGHJ6*02     11   -----------------------------------------------------.....................................  47

                                                  
                                       V  T  V  S 
                    Query_13087  362  GTCACCGTCTCC  373
J  100.0% (49/49)   IGHJ6*02     48   ............  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_304727

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           396     2e-112
IGHD3-10*01                                                                                           12.2    37    
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TCGGGG	TCTTTGGTCCGGCGAACAGGGA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGGGTCTTTGGTCCGGCGAACAGGGATACTTTGACTTC	ARDRGLWSGEQGYFDF	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	71	3	0	95.9
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	102	12	0	89.5
CDR3-IMGT (germline)	292	299	8	8	0	0	100
Total	N/A	N/A	295	274	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  L  K  V  S  C  K  A  S  G  G  A  F  S  
                    Query_13088  5    AGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGCTGAAGGTCTCCTGCAAGGCTTCTGGAGGCGCCTTCAGCA  94
V  92.9% (274/295)  IGHV1-69*12  2    .............G........G...........................G.............................A.........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  A  V  S  W  V  R  Q  A  P  G  H  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  N  Y  
                    Query_13088  95   CCTATGCTGTCAGCTGGGTGCGACAGGCCCCTGGACACGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACCACAAACTACG  184
V  92.9% (274/295)  IGHV1-69*12  92   G.......A............................A.........................................AG.........  181
                                      S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  N  D  F  R  G  R  L  T  I  I  A  D  G  S  T  S  T  A  Y  M  E  L  T  S  L  R  S  E  D  
                    Query_13088  185  CAAATGACTTCCGGGGCAGACTCACGATTATCGCGGACGGATCCACGAGCACAGCCTACATGGAGCTGACCAGCCTCAGATCTGAGGACA  274
V  92.9% (274/295)  IGHV1-69*12  182  ..C.GA.G....A.......G.........C........A.............................G......G.............  271
                                      A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      T  A  V  Y  Y  C  A  R  D  R  G  L  W  S  G  E  Q  G  Y  F  D  F  W  G  Q  G  T  L  V  T  
                    Query_13088  275  CGGCCGTCTATTATTGTGCGAGAGATCGGGGTCTTTGGTCCGGCGAACAGGGATACTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCG  364
V  92.9% (274/295)  IGHV1-69*12  272  .......G.....C...........-----------------------------------------------------------------  296
                                      T  A  V  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD3-10*01  14   -------------------------......-----------------------------------------------------------  19
J  97.8% (45/46)    IGHJ4*02     3    -----------------------------------------------------..........A..........................  39

                                               
                                      V  S  S  
                    Query_13088  365  TCTCCTCAG  373
J  97.8% (45/46)    IGHJ4*02     40   .........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_304726

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            397     8e-113
IGHD3-10*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGAC	TGGTTCGGGGA	CTT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTAC	ARVTGSGTYSFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  G  S  Y
                    Query_13089  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCGGCAGCTA  90
V  93.8% (272/290)  IGHV1-8*02   6    ..................G...............................................................AC......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  D  Y  A  Q
                    Query_13089  91   TGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATGAATCCTAACAGTGGGAACACAGACTATGCACA  180
V  93.8% (272/290)  IGHV1-8*02   96   .........................A..................................C...........T.......G.........  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  Y  M  E  L  S  S  L  G  S  A  D  T  A
                    Query_13089  181  GAAGTTCCGGGGCAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCTACATGGAGCTGAGTAGTCTGGGATCTGCCGACACGGC  270
V  93.8% (272/290)  IGHV1-8*02   186  ........A.......................A...C..C.T........................C..C...A......AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  V  T  G  S  G  T  Y  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13089  271  CGTCTATTACTGTGCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  93.8% (272/290)  IGHV1-8*02   276  ...G................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (11/11)   IGHD3-10*01  10   ------------------------...........---------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    --------------------------------------...A......C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_304725

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           333     1e-93
IGHD3-16*01                                                                                           12.2    32   
IGHJ2*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGGCG	TGGGGG	GATCAAGGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGGCGTGGGGGGATCAAGGGATCCTGGTACTCCGATCTC	ARVRRGGIKGSWYSDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13090  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGACATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-48*03  47   ..............................................TT..........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  T  G  S  T  L  I  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13090  91   AGTGGGTTTCACACATCAGTACTGGTAGTACTCTAATAAACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCG  180
V  92.8% (231/249)  IGHV3-48*03  137  ...........T....T....G.A..G...G.ACC...T..................................................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  V  R  R  G  G  I  K  
                    Query_13090  181  AGAATTCACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTATCTATTACTGTGCGAGAGTCCGGCGTGGGGGGATCAAGG  270
V  92.8% (231/249)  IGHV3-48*03  227  ....C.......................C.....................G.T................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------------......--------  22

                                      T------------------>                                  
                                      G  S  W  Y  S  D  L  W  G  R  G  T  L  V  I  V  S  S  
                    Query_13090  271  GATCCTGGTACTCCGATCTCTGGGGCCGTGGCACCCTGGTCATTGTCTCCTCAG  324
J  96.0% (48/50)    IGHJ2*01     4    ----........T.............................C...........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_304724

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            327     9e-92
IGHD3-10*01                                                                                           12.2    31   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TTAAGGGAAGTA	GTTCGTCGACTTATT	N/A	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTAAGGGAAGTAGTTCGTCGACTTATTACTGGTTCGACCCC	VKGSSSSTYYWFDP	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	241	1	1	0	0	100
Total	N/A	N/A	241	225	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  L  V  S  G  G  S  I  T  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_13091  1    ACCCTGTCCCTCACCTGCCTTGTCTCTGGTGGGTCCATTACCAGTAGTAACTGGTGGTCTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.4% (225/241)  IGHV4-4*02   49   ..................GC............C.....C.G................AG...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  A  D  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  K 
                    Query_13091  91   GAGTGGATTGCGGATATCTATTATAGTGGGAGCACCAATTACAACCCGTCCCTGAAGAGTCGAGTCACCATCTCATTAGACAAGTCCAAG  180
V  93.4% (225/241)  IGHV4-4*02   139  ..........G...A......C................C..............C.................A...G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  V  K  G  S  S  S  S  T  Y  Y 
                    Query_13091  181  AACCAGTTCTCCCTGAAACTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTATTGTGTTAAGGGAAGTAGTTCGTCGACTTATTAC  270
V  93.4% (225/241)  IGHV4-4*02   229  .................G......................................C....-----------------------------  289
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  80.0% (12/15)    IGHD3-10*01  12   -------------------------------------------------------------------------.....GG..G.....--  26
J  95.8% (46/48)    IGHJ5*02     4    ----------------------------------------------------------------------------------------..  5

                                      ----------->                                  
                                       W  F  D  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_13091  271  TGGTTCGACCCCTGGGGCCGGGGAACCCTGGTCACTGTCTCCTCAG  316
J  95.8% (46/48)    IGHJ5*02     6    ...................A...............C..........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_147379

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           332     3e-93
IGHD3-9*01                                                                                            18.0    0.58 
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-9*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCCCGG	GACGGGTTATTA	C	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCCCGGGACGGGTTATTACGATGGTTTTGATATC	AREPGTGYYDGFDI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  V  P  G  K  G  L  
                    Query_13092  1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTCAGTAGCTATGAAATGAACTGGGTCCGCCAGGTTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-48*03  47   ........................C.....................T.........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  G  G  T  I  M  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13092  91   AGTGGGTTTCCTACATTAGCACTGGTGGTACTATTATGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-48*03  137  ..........A........T.G.A......G..CC..A.....C........T.....................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  Q  S  L  D  L  Q  M  T  S  L  R  A  E  D  T  G  V  Y  Y  C  A  R  E  P  G  T  G  Y  Y  
                    Query_13092  181  AGCAGTCACTGGATTTGCAAATGACCAGCCTGAGAGCCGAGGACACGGGTGTTTATTACTGTGCGAGAGAGCCCGGGACGGGTTATTACG  270
V  92.4% (231/250)  IGHV3-48*03  227  ..A.C......T..C.........A.......................C.....................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD3-9*01   16   ----------------------------------------------------------------------------...T........--  27
J  91.8% (45/49)    IGHJ3*02     2    -----------------------------------------------------------------------------------------.  2

                                      ------------->                                  
                                      D  G  F  D  I  W  G  Q  G  T  V  V  T  V  S  A  
                    Query_13092  271  ATGGTTTTGATATCTGGGGCCAAGGCACAGTGGTCACCGTCTCTGCAG  318
J  91.8% (45/49)    IGHJ3*02     3    ...C.....................G...A..............T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_31871

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           439     2e-125
IGHD3-22*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              108     9e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCCGT	TGGTTAT	AATTCCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTC	ARAVGYNSDYYYGMDV	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	24	0	0	100
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	111	3	0	97.4
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	287	6	0	98


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_13093  2    AGGTCCAGCTTGTGCAGTCTGGGGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  91
V  98.0% (287/293)  IGHV5-51*01  2    ....G.....G...........A...................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_13093  92   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  181
V  98.0% (287/293)  IGHV5-51*01  92   ..........................................................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      R  P  P  F  Q  G  Q  V  T  I  S  A  D  K  A  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_13093  182  GACCGCCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGGCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  271
V  98.0% (287/293)  IGHV5-51*01  182  .C...T...................................T................................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------------CDR3-IMGT------------------>                         
                                      T  A  M  Y  Y  C  A  R  A  V  G  Y  N  S  D  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  
                    Query_13093  272  CCGCCATGTATTACTGTGCGAGAGCCGTTGGTTATAATTCCGACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCG  361
V  98.0% (287/293)  IGHV5-51*01  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD3-22*01  19   ----------------------------.......-------------------------------------------------------  25
J  100.0% (56/56)   IGHJ6*02     7    ------------------------------------------................................................  54

                                              
                                      V  S  S 
                    Query_13093  362  TCTCCTCA  369
J  100.0% (56/56)   IGHJ6*02     55   ........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_295438

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD7-27*01                                                                                           14.1    8.3   
IGHJ5*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCA	AACTGGG	AACTCAATAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGACGTCAAACTGGGAACTCAATATACAACTGGTTCGACCTC	SRRQTGNSIYNWFDL	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  *  I  R  Q  P  P  G  K  G  L  E 
                    Query_13094  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAACTGAATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.9% (238/243)  IGHV4-59*01  49   .......................................................G...G..............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13094  91   TGGATTGGATATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  ........G.................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  R  R  Q  T  G  N  S  I  Y  N 
                    Query_13094  181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTTCGAGACGTCAAACTGGGAACTCAATATACAAC  270
V  97.9% (238/243)  IGHV4-59*01  229  .............A...........................................G.....---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD7-27*01  3    --------------------------------------------------------------------.......---------------  9
J  98.0% (50/51)    IGHJ5*02     1    -------------------------------------------------------------------------------------.....  5

                                      ----------->                                  
                                       W  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13094  271  TGGTTCGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  98.0% (50/51)    IGHJ5*02     6    ..........C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_295439

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_13095  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_13095  91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_13095  181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_13095  271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_61449

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           361     4e-102
IGHD3-10*01                                                                                           14.1    8.1   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTA	GGG	CGGGGAG	AGGGGG	CTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	AGGGCGGGGAGAGGGGGCTTGGACTAC	RAGRGGLDY	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	249	1	1	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_13096  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  96.4% (240/249)  IGHV3-73*01  47   .........A................................................................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  H  I  R  S  I  S  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_13096  91   AGTGGGTTGGTCATATTAGAAGCATCTCTAACAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGGCAGGTTCACCATCTCCAGAGATG  180
V  96.4% (240/249)  IGHV3-73*01  137  ..........C.G...........AAG...............................................................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  E  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  R  A  G  R  G  G  L  
                    Query_13096  181  ATTCAGAGAACACGGCGTATCTGCAAATGAACAGCCTGAAAACCGAGGACACGGCCGTCTATTATTGTAGGGCGGGGAGAGGGGGCTTGG  270
V  96.4% (240/249)  IGHV3-73*01  227  .....A....................................................G.....C....---------------------  295
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  100.0% (7/7)     IGHD3-10*01  15   ------------------------------------------------------------------------.......-----------  21
J  97.7% (43/44)    IGHJ4*02     5    -------------------------------------------------------------------------------------...T.  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13096  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.7% (43/44)    IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_295433

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTTTGTGG	TACTCTGGTTCGGGGAGT	AATACCCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTTTGTGGTACTCTGGTTCGGGGAGTAATACCCGTTTTGACTAC	ARALWYSGSGSNTRFDY	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  S  G  G  Y  Y  W  I  W  V  R  Q  H  P  G  K  G 
                    Query_13097  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCAGCAGTGGTGGTTACTACTGGATCTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  97.2% (243/250)  IGHV4-31*03  49   ...............................G.............................G....A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  T  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13097  91   CTGGAGTGGATTGGATACATCTATTACAGTGGGAGCACCTACTACACCCCGTCCCTCAAGAGTCGAGTTACCATTTCAGTCGACACGTCT  180
V  97.2% (243/250)  IGHV4-31*03  139  ..............G...............................A...........................A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  L  W  Y  S  G  S 
                    Query_13097  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTTTGTGGTACTCTGGTTCG  270
V  97.2% (243/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD3-10*01  5    ------------------------------------------------------------------------------....A.......  16

                                      MGT-------------------->                                  
                                       G  S  N  T  R  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13097  271  GGGAGTAATACCCGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  94.4% (17/18)    IGHD3-10*01  17   ......----------------------------------------------------  22
J  100.0% (43/43)   IGHJ4*02     6    ---------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_295430

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGACC	TACGATTTTTGGAG	GGACC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGACCTACGATTTTTGGAGGGACCACTACTACGCTATGGACGTC	ARVTYDFWRDHYYAMDV	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  T  T  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_13098  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCACCACTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   ...............................G........G..G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  V  Y  Y  I  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S 
                    Query_13098  91   CTGGAATGGATTGGGACTGTCTATTATATTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCCGTGGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....G..........G.A.........G.............................A.....................A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  R  L  S  S  L  T  A  A  D  T  A  V  Y  H  C  A  R  V  T  Y  D  F  W  R 
                    Query_13098  181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTTTGACCGCCGCAGACACGGCTGTCTATCACTGTGCGAGGGTGACCTACGATTTTTGGAGG  270
V  94.8% (235/248)  IGHV4-39*01  229  ...................A..........G......................G...T..........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (14/14)   IGHD3-3*01   5    ---------------------------------------------------------------------------..............-  18

                                      MGT-------------------->                              
                                       D  H  Y  Y  A  M  D  V  W  G  Q  G  T  T  V  I  V  S 
                    Query_13098  271  GACCACTACTACGCTATGGACGTCTGGGGCCAGGGGACCACGGTCATCGTCTCC  324
J  94.0% (47/50)    IGHJ6*02     10   ----.........G..................A.............C.......  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_61448

Length=316
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           372     2e-105
IGHD7-27*01                                                                                           12.2    29    
IGHJ1*01                                                                                              62.2    6e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD7-27*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CC	CTGGGG	N/A	GCACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCTGGGGGCAC	ARPWGH	243	260	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	243	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_13099  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (243/248)  IGHV3-11*01  47   .................................................C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  T  S  G  S  T  K  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13099  91   AGTGGGTTTCATACATTAGTACTAGTGGTAGTACCAAACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  98.0% (243/248)  IGHV3-11*01  137  .....................G..............T.T...................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----CDR3-IMGT--->          
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  P  W  G  H  W  G  R  
                    Query_13099  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGACCCTGGGGGCACTGGGGCCGGG  270
V  98.0% (243/248)  IGHV3-11*01  227  ..........................................................C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD7-27*01  5    ----------------------------------------------------------------------......--------------  10
J  94.7% (36/38)    IGHJ1*01     15   ----------------------------------------------------------------------------...........A..  28

                                                              
                                      G  T  L  V  T  V  S  S  
                    Query_13099  271  GCACCCTGGTCACTGTCTCCTCAG  294
J  94.7% (36/38)    IGHJ1*01     29   .............C..........  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30515799


Query= Query_295437

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70D*04                                                                                          414     5e-118
IGHD3-16*01                                                                                           27.6    8e-04 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70D*04	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGGA	CATAT	TTACGTTTGGGGGA	ATTCCG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCACGGACATATTTACGTTTGGGGGAATTCCGTGACTAC	ARTYLRLGEFRDY	263	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	46	0	0	100
CDR1-IMGT	47	76	30	30	0	0	100
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	20	1	0	95.2
FR3-IMGT	149	262	114	113	1	0	99.1
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	269	267	2	0	99.3


Alignments

                                       <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                         L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  R  V  S  W  I  R
                    Query_13100   1    GCTGGTGAAACCCACACAGACCCTCACACTGACCTGCACCTTCTCTGGGTTCTCACTCAGCACTAGTGGAATGCGTGTGAGCTGGATCCG  90
V  99.3% (267/269)  IGHV2-70D*04  30   ..........................................................................................  119
                                         L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  R  V  S  W  I  R

                                       -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                         Q  P  P  G  K  A  L  E  W  L  A  R  I  D  W  E  D  D  K  F  Y  S  T  S  L  K  T  R  L  T
                    Query_13100   91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACGCATTGATTGGGAGGATGATAAATTCTACAGCACATCTCTGAAGACCAGGCTCAC  180
V  99.3% (267/269)  IGHV2-70D*04  120  ................................................T.........................................  209
                                         Q  P  P  G  K  A  L  E  W  L  A  R  I  D  W  D  D  D  K  F  Y  S  T  S  L  K  T  R  L  T

                                       ---------------------FR3-IMGT----------------------------------------------------><-------
                                         I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R  T
                    Query_13100   181  CATCTCCAAGGACACCTCCAAAAACCAGGTGGTCCTTACAATGACCAACATGGACCCTGTGGACACAGCCACGTATTATTGTGCACGGAC  270
V  99.3% (267/269)  IGHV2-70D*04  210  ..............................................................................C..........-  298
                                         I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                       -------CDR3-IMGT-------------->                                  
                                         Y  L  R  L  G  E  F  R  D  Y  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_13100   271  ATATTTACGTTTGGGGGAATTCCGTGACTACTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  335
D  100.0% (14/14)   IGHD3-16*01   10   ----..............-----------------------------------------------  23
J  97.6% (40/41)    IGHJ4*02      8    ------------------------.......................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_295434

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           360     1e-101
IGHD6-19*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              75.7    5e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	GGG	AGCAGTGGCTGGT	G	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGGGAGCAGTGGCTGGTGTTGACTAC	TGAVAGVDY	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	250	2	2	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_13101  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCCATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  96.0% (240/250)  IGHV3-73*01  47   .........A..........................................T.....................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  S  K  A  K  S  Y  A  T  A  Y  A  A  S  V  K  V  R  F  T  I  S  R  D  
                    Query_13101  91   AGTGGGTGGGCCGTATTAGAAGCAAAGCTAAGAGTTACGCGACAGCATATGCTGCGTCGGTGAAAGTCAGGTTCACCATCTCTAGAGATG  180
V  96.0% (240/250)  IGHV3-73*01  137  .......T.......................C..................................G...............C.......  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  K  N  M  T  Y  L  Q  M  N  S  L  R  T  E  D  T  A  V  Y  Y  C  T  G  A  V  A  G  V  
                    Query_13101  181  ATTCAAAGAACATGACGTATCTGCAAATGAACAGCCTGAGAACCGAGGACACGGCCGTCTATTACTGTACGGGAGCAGTGGCTGGTGTTG  270
V  96.0% (240/250)  IGHV3-73*01  227  ............C.G........................A..................G...........--------------------  296
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (13/13)   IGHD6-19*01  7    -------------------------------------------------------------------------.............----  19
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_13101  271  ACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  309
J  97.6% (41/42)    IGHJ4*02     10   ..........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_117711

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           310     1e-86
IGHD1-26*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AATCGA	TGGGAGCTAC	CAGAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAATCGATGGGAGCTACCAGAATTTGACTCC	AKNRWELPEFDS	237	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	20	4	0	83.3
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	18	6	0	75
FR3-IMGT	123	236	114	111	3	0	97.4
CDR3-IMGT (germline)	237	242	6	6	0	0	100
Total	N/A	N/A	230	214	16	0	93


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  R  Y  N  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  
                    Query_13102  13   GTGCAGCCTCTGGATTCACCTTTAGTAGATATAACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAAGTATTC  102
V  93.0% (214/230)  IGHV3-23*01  65   .........................C..C...GC.....G...........................................GC....A  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      R  T  S  D  G  Y  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_13102  103  GTACTAGTGATGGTTACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACCCTGTATCTGC  192
V  93.0% (214/230)  IGHV3-23*01  155  ..GG.....G....AG...............................................................G..........  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------CDR3-IMGT------------>          
                                      Q  M  S  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  N  R  W  E  L  P  E  F  D  S  W  G  L  
                    Query_13102  193  AAATGAGCAGCCTGAGAGCCGAGGACACGGCCCTATATTACTGTGCGAAAAATCGATGGGAGCTACCAGAATTTGACTCCTGGGGCCTGG  282
V  93.0% (214/230)  IGHV3-23*01  245  ......A.........................G.................----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (10/10)   IGHD1-26*01  8    --------------------------------------------------------..........------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------------------------------.......A........A..  24

                                                              
                                      G  T  L  V  T  V  S  S  
                    Query_13102  283  GAACCCTGGTCACCGTCTCCTCAG  306
J  95.3% (41/43)    IGHJ4*02     25   ........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_168837

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            372     2e-105
IGHD1-26*01                                                                                           12.2    33    
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	GGGAGC	ATCGAAAT	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGAGGGAGCATCGAAATATTACAACTACTACTACAGTATGGACGTC	AKEGASKYYNYYYSMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  G  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13103  1    GGTCCCTGAGACTCTCCTGTGGAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  97.6% (244/250)  IGHV3-9*01   47   .....................C....................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  K  S  R  T  I  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13103  91   AGTGGGTCTCAGGTATTAGTTGGAAAAGTCGTACCATAGACTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.6% (244/250)  IGHV3-9*01   137  .........................T...G...G.....G..................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  E  G  A  S  K  Y  Y  
                    Query_13103  181  AGAACTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACAGCCTTGTATTACTGTGCAAAAGAGGGAGCATCGAAATATTACA  270
V  97.6% (244/250)  IGHV3-9*01   227  ..............................................G.......................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-26*01  9    ----------------------------------------------------------------------......--------------  14
J  95.2% (59/62)    IGHJ6*02     1    ------------------------------------------------------------------------------------.....T  6

                                      GT-------------------->                                 
                                      N  Y  Y  Y  S  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13103  271  ACTACTACTACAGTATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTCCTCA  326
J  95.2% (59/62)    IGHJ6*02     7    ...........G...................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_81534

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           319     2e-89
IGHD6-13*01                                                                                           18.0    0.59 
IGHJ2*01                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-13*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGGCGG	GCAGCAGGTGGT	C	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGGGCGGGCAGCAGGTGGTCACTGGTTCTTCGATGTC	AKDGRAAGGHWFFDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13104  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-30*18  47   ........................................C..T..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  L  S  D  N  G  S  N  K  F  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_13104  91   AGTGGGTGGCAGTTTTGTCAGATAATGGAAGTAACAAATTCTATGCAGATTCCGTTAGGGGCCGATTCACCATCTCCAGAGACAATGCCA  180
V  90.8% (227/250)  IGHV3-30*18  137  ..............A.A...T..G..........T....A.........C.....G.A............................T...  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      N  N  T  L  Y  L  Q  L  N  S  L  R  D  A  D  T  V  I  Y  Y  C  A  K  D  G  R  A  A  G  G  
                    Query_13104  181  ACAACACGCTGTATTTGCAACTGAACAGCCTAAGAGATGCTGACACGGTTATCTATTACTGTGCGAAAGATGGGCGGGCAGCAGGTGGTC  270
V  90.8% (227/250)  IGHV3-30*18  227  .G............C.....A..........G....C..AG.......C.G.G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  91.7% (11/12)    IGHD6-13*01  8    -----------------------------------------------------------------------------.......C....-  19

                                      ---------------->                                  
                                      H  W  F  F  D  V  W  G  R  G  T  L  V  T  V  S  S  
                    Query_13104  271  ACTGGTTCTTCGATGTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  321
J  96.1% (49/51)    IGHJ2*01     3    ......A.......C....................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_185150

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           335     4e-94
IGHD3-16*02                                                                                           12.2    31   
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	TTATCG	ACATTGGTTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTATCGACATTGGTTATTTGACTAT	ARHYRHWLFDY	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  V  S  L  T  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_13105  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGTCTCCCTCACCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGGC  93
V  92.8% (232/250)  IGHV4-39*01  50   .....TCC...A....C.............G....A...G..................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  L  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_13105  94   TGGAGTGGATTGGGAGTTTGTATTATAGTGGCAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTGGACACGTCCA  183
V  92.8% (232/250)  IGHV4-39*01  140  .................A.C...........G...............................................A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  H  L  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  R  H  W  L  F  
                    Query_13105  184  AGAACCACTTGTCCCTGAACCTGAACTCCGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACATTATCGACATTGGTTATTTG  273
V  92.8% (232/250)  IGHV4-39*01  230  .......G..C........G....G...T.......................G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*02  25   ----------------------------------------------------------------------......--------------  30
J  97.7% (42/43)    IGHJ4*02     6    --------------------------------------------------------------------------------------....  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13105  274  ACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.7% (42/43)    IGHJ4*02     10   ....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_185152

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           360     1e-101
IGHD1-26*01                                                                                           14.1    9.5   
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGC	GTGGGGGCTA	AGATAAAAGTGACTGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGTGGGGGCTAAGATAAAAGTGACTGATGATGGGTTTGATATC	AGVGAKIKVTDDGFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	258	28	0	90.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  S  E  L  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  R  F  Y  G  H
                    Query_13106  1    GCAGCTGGTGCAGTCTGGATCAGAACTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGGTCTGGATATAGGTTTTACGGCCA  90
V  90.2% (258/286)  IGHV5-51*03  6    ...................G....GG........................A...............T........C..C...AC.A..T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  T  I  Y  P  A  D  S  D  T  R  Y  S  P
                    Query_13106  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGACCATCTATCCTGCTGACTCTGATACCAGATACAGCCC  180
V  90.2% (258/286)  IGHV5-51*03  96   .....................................................T...........G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  D  G  H  I  T  I  S  A  D  K  S  I  S  T  A  Y  L  H  W  R  S  G  R  A  S  D  T  A
                    Query_13106  181  GTCCTTTGATGGCCACATCACCATCTCAGCCGACAAGTCCATCAGTACCGCTTACCTACACTGGCGCAGCGGGAGGGCCTCGGACACCGC  270
V  90.2% (258/286)  IGHV5-51*03  186  ......CC.A.....GG............................C.....C.....G..G...A.....CT..A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        T  Y  Y  C  A  G  V  G  A  K  I  K  V  T  D  D  G  F  D  I  W  G  Q  G  T  M  V  T  G  S
                    Query_13106  271  CACATATTACTGTGCGGGCGTGGGGGCTAAGATAAAAGTGACTGATGATGGGTTTGATATCTGGGGCCAAGGGACAATGGTCACCGGCTC  360
V  90.2% (258/286)  IGHV5-51*03  276  ..TG............--------------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                           
D  90.0% (9/10)     IGHD1-26*01  7    -------------------.....A....-------------------------------------------------------------  16
J  94.0% (47/50)    IGHJ3*02     1    ---------------------------------------------.....CT..................................T...  45

                                           
                                        S  
                    Query_13106  361  TTCAG  365
J  94.0% (47/50)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_185155

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           430     1e-122
IGHD2-8*02                                                                                            14.1    9.4   
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CTGGT	TACTGGT	ACCAACGCCAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTC	AGLVTGTNATYGLDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	282	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_13107  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAGCTA  90
V  97.6% (282/289)  IGHV5-51*03  6    .................................................................G........................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  R  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_13107  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGAGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  97.6% (282/289)  IGHV5-51*03  96   ........G..................................T..............................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  A
                    Query_13107  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACCCCGC  270
V  97.6% (282/289)  IGHV5-51*03  186  ...................................A.........C.......................................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  G  L  V  T  G  T  N  A  T  Y  G  L  D  V  W  G  Q  G  S  K  V  T  V  S  S
                    Query_13107  271  CATGTATTACTGTGCGGGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTCTGGGGCCAAGGGAGCAAGGTCACCGTCTCCTC  360
V  97.6% (282/289)  IGHV5-51*03  276  ................A..-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-8*02   10   ------------------------.......-----------------------------------------------------------  16
J  93.9% (46/49)    IGHJ6*02     14   ------------------------------------------.......A.....................C..C...............  61

                                       
                                       
                    Query_13107  361  A  361
J  93.9% (46/49)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_185154

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     8e-121
IGHD2-2*02                                                                                            10.3    140   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCTAAAACAGGCCCAGAA	ATACC	CGACCCCCG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCTAAAACAGGCCCAGAAATACCCGACCCCCGACTTCGGTATGGACGTC	ARPLKQAQKYPTPDFGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	280	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_13108  1    GCAGCTGGTGCAGTCTGGAGCAGAAGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAATTA  90
V  96.9% (280/289)  IGHV5-51*03  6    ........................G.....A.......................................................GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  R  L  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_13108  91   CTGGATCGCCTGGGTGCGCCGGCTGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.9% (280/289)  IGHV5-51*03  96   ........G...........A.A...................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  H  W  S  S  L  K  A  S  D  T  A
                    Query_13108  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGCACCGCCTACCTGCACTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (280/289)  IGHV5-51*03  186  ...................................A........................G.............................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  P  L  K  Q  A  Q  K  Y  P  T  P  D  F  G  M  D  V  W  G  Q  G  T  A  V
                    Query_13108  271  CATGTATTACTGTGCGAGACCTCTAAAACAGGCCCAGAAATACCCGACCCCCGACTTCGGTATGGACGTCTGGGGCCAAGGGACCGCGGT  360
V  96.9% (280/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD2-2*02   27   ---------------------------------------.....----------------------------------------------  31
J  96.0% (48/50)    IGHJ6*02     13   -----------------------------------------------------...A............................A....  49

                                                   
                                        T  V  S  S 
                    Query_13108  361  CACCGTCTCCTCA  373
J  96.0% (48/50)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_185157

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    8.2  
IGHJ5*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TTGTC	GGATACA	CCTCTCTCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTGTCGGATACACCTCTCTCGACTGGTTCGACCCC	VVGYTSLDWFDP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  S  S  R  Y  Y  W  G  W  I  R  Q  P  P  G  E  G 
                    Query_13109  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGCCTCCATCAGCAGTAGTCGTTACTACTGGGGTTGGATCCGCCAGCCCCCAGGGGAGGGG  90
V  91.4% (223/244)  IGHV4-39*01  49   .............................T.G................A.............C.....................A.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  Y  Y  P  E  S  P  Y  Y  N  P  S  L  N  Y  R  V  T  M  S  V  D  T  P 
                    Query_13109  91   CTGGAGTGGCTTGGGAGTATCTATTATCCTGAGAGCCCCTACTACAACCCGTCCCTCAATTATCGAGTCACCATGTCCGTAGACACGCCC  180
V  91.4% (223/244)  IGHV4-39*01  139  .........A.................AG..G....A......................GAG............A............T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  D  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  G  Y  T  S  L  D  W 
                    Query_13109  181  AAGAACCAGTTCTCCCTGAGACTTGACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGTTGTCGGATACACCTCTCTCGACTGG  270
V  91.4% (223/244)  IGHV4-39*01  229  ...................AG..GAG...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (7/7)     IGHD5-18*01  3    ---------------------------------------------------------------------.......--------------  9
J  100.0% (48/48)   IGHJ5*02     4    -------------------------------------------------------------------------------------.....  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13109  271  TTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ5*02     9    ...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_185156

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           371     7e-105
IGHD3-16*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GTCAAGCGGGCGGCACC	TTTGGGG	CGAGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGGTCAAGCGGGCGGCACCTTTGGGGCGAGCGACTAC	AGGQAGGTFGASDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	289	263	26	0	91


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  S  F  N  D  Y 
                    Query_13110  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAATGAAGGTCTCCTGCAAGGCTTCCGGTTACAGCTTTAACGACTAT  91
V  91.0% (263/289)  IGHV1-18*01  7    .............................................G......................T.......C.....C.AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  M  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  A  Y  N  G  N  T  K  Y  S  E 
                    Query_13110  92   GGTATCACTTGGATGCGACAGGCCCCTGGACAGGGGCCTGAGTGGATGGGATGGATCAGCGCATATAATGGTAACACAAAGTATTCAGAG  181
V  91.0% (263/289)  IGHV1-18*01  97   .......GC...G...................A....T........................T..C..............C...G..C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  L  Q  G  R  L  I  M  T  T  D  T  S  T  S  T  A  N  M  E  L  R  S  L  R  S  D  D  P  A 
                    Query_13110  182  AGGCTCCAGGGCAGACTCATCATGACCACAGACACATCCACGAGCACAGCCAACATGGAATTGAGGAGCCTGAGATCTGACGACCCGGCC  271
V  91.0% (263/289)  IGHV1-18*01  187  .A.............G...C...............................T.......GC.......................A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  G  G  Q  A  G  G  T  F  G  A  S  D  Y  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_13110  272  GTCTATTATTGTGCGGGAGGTCAAGCGGGCGGCACCTTTGGGGCGAGCGACTACTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  359
V  91.0% (263/289)  IGHV1-18*01  277  ..G.....C......A...---------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD3-16*01  15   ------------------------------------.......---------------------------------------------  21
J  97.5% (39/40)    IGHJ4*02     9    ------------------------------------------------...........................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_96597

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           330     1e-92
IGHD4-4*01                                                                                            14.1    8.3  
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-4*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAAACT	TAACTAC	GCGGGTGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAAACTTAACTACGCGGGTGGTTTTGATGTC	ARDKLNYAGGFDV	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	231	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  N  S  G  V  H  Y  W  S  W  I  R  Q  H  P  G  R  G 
                    Query_13111  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAATAGTGGTGTTCATTACTGGAGTTGGATCCGCCAGCACCCAGGGAGGGGC  90
V  92.0% (231/251)  IGHV4-31*03  49   ...................C....................GC.......G.T.C........C......................A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  Y  S  G  S  T  Y  Y  S  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_13111  91   CTGGAGTGGATTGGGTACATCTCTTACAGTGGGAGTACCTACTACAGCCCGTCCCTCAAGAGTCGACTTACTATATCAGTAGACACGTCT  180
V  92.0% (231/251)  IGHV4-31*03  139  ......................A............C..........A...................G....C..................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  R  L  G  S  V  T  A  A  D  T  A  M  Y  F  C  A  R  D  K  L  N  Y  A  G 
                    Query_13111  181  AAGAATCAGTTCTCCCTGAGGTTGGGCTCTGTGACTGCCGCAGACACGGCCATGTATTTCTGTGCGAGAGACAAACTTAACTACGCGGGT  270
V  92.0% (231/251)  IGHV4-31*03  229  .....C.............A.C..A................G.........G......A............-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD4-4*01   10   -----------------------------------------------------------------------------.......------  16

                                      ----------->                                  
                                       G  F  D  V  W  G  Q  G  I  M  V  T  V  S  S  
                    Query_13111  271  GGTTTTGATGTCTGGGGCCAAGGGATAATGGTCACCGTCTCTTCAG  316
J  97.7% (43/44)    IGHJ3*01     7    --.......................C....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_61444

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	70	1	0	98.6
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	24	0	0	100
FR3-IMGT	176	289	114	108	6	0	94.7
CDR3-IMGT (germline)	290	292	3	3	0	0	100
Total	N/A	N/A	287	276	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  
                    Query_13112  6    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCT  95
V  96.2% (276/287)  IGHV5-51*01  5    ...................................................................T...................G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  V  P  G  K  G  L  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  
                    Query_13112  96   ACTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCTGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTC  185
V  96.2% (276/287)  IGHV5-51*01  95   .......................A.......G.............G..........................................C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  I  I  S  A  D  K  S  V  S  T  A  Y  L  Q  W  S  P  L  K  A  S  D  T  
                    Query_13112  186  CGTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACAAGTCCGTCAGCACCGCCTACCTGCAGTGGAGCCCCCTGAAGGCCTCGGACACCG  275
V  96.2% (276/287)  IGHV5-51*01  185  .....................C...................A..........................AG....................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-------------CDR3-IMGT------------>                                  
                                      A  V  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13112  276  CCGTGTATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  96.2% (276/287)  IGHV5-51*01  275  ..A..............-------------------------------------------------------------------  291
                                      A  M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ----------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_96593

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           369     2e-104
IGHD1-1*01                                                                                            18.0    0.64  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCTT	TACAACTGG	GTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCTTTACAACTGGGTTTTTGACTTC	ARGLYNWVFDF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	263	27	0	90.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  R  V  S  C  K  A  S  G  D  T  F  T  S  Y
                    Query_13113  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCGGGGTCCTCGGTGAGGGTCTCCTGCAAGGCTTCTGGAGACACCTTCACTAGTTA  90
V  90.7% (263/290)  IGHV1-69*01  6    ..................G.................T.............A.......................G........GC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        S  I  S  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  G  I  I  P  R  F  G  T  K  N  Y  A  Q
                    Query_13113  91   CAGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGAGGCATCATCCCCAGGTTTGGTACAAAGAATTACGCACA  180
V  90.7% (263/290)  IGHV1-69*01  96   TGC...................................T...............G........T.TC.........GCA..C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  G  P  T  S  T  V  Y  M  D  L  S  S  L  T  S  E  D  T  A
                    Query_13113  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGGACCCACGAGCACAGTCTACATGGACCTGAGCAGCCTGACATCTGAGGACACGGC  270
V  90.7% (263/290)  IGHV1-69*01  186  ...................................A.T............C.........G.............G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                 
                                        T  Y  Y  C  A  R  G  L  Y  N  W  V  F  D  F  W  G  Q  G  S  L  V  T  V  S  S 
                    Query_13113  271  CACATATTACTGTGCGAGAGGGCTTTACAACTGGGTTTTTGACTTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCA  349
V  90.7% (263/290)  IGHV1-69*01  276  .GTG................-----------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                             
D  100.0% (9/9)     IGHD1-1*01   3    -------------------------.........---------------------------------------------  11
J  95.2% (40/42)    IGHJ4*02     6    -------------------------------------.......A.............A....................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_96590

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           341     5e-96
IGHD3-16*02                                                                                           10.3    117  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCCTC	TATCG	N/A	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATTCCTCTATCGACTTCTTGGACTAC	VRDSSIDFLDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13114  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTTAGTAATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-48*03  47   .....................................C..C....G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  D  T  I  Y  Q  A  D  S  V  K  G  R  F  S  V  S  R  D  N  A  
                    Query_13114  91   AGTGGGTTTCATACATCAGTAGTAGTGGCGATACCATATACCAGGCAGACTCTGTGAAGGGCCGGTTCAGCGTCTCCAGAGACAACGCCG  180
V  93.6% (234/250)  IGHV3-48*03  137  ................T...........TAG..........T.C....................A....C.A.................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      E  N  S  L  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  R  D  S  S  I  D  F  L  
                    Query_13114  181  AGAACTCACTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTTTATTACTGTGTGAGAGATTCCTCTATCGACTTCTTGG  270
V  93.6% (234/250)  IGHV3-48*03  227  ............A...........................G......................C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-16*02  26   ----------------------------------------------------------------------------.....---------  30
J  95.7% (44/46)    IGHJ4*02     1    ---------------------------------------------------------------------------------...A...T.  9

                                      ---->                                
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13114  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  307
J  95.7% (44/46)    IGHJ4*02     10   .....................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_22929

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           416     2e-118
IGHD5-18*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	GTGGACACACCTATGG	AGCCCGAACCGACCCCCATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGGACACACCTATGGAGCCCGAACCGACCCCCATCTTGACTAC	ARRGHTYGARTDPHLDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  I  F  R  T  Y
                    Query_13115  1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACATCTTTAGAACCTA  90
V  95.9% (278/290)  IGHV5-51*01  6    ....................C.............................A..........................G.....CC.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_13115  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  95.9% (278/290)  IGHV5-51*01  96   ........G.................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  H  S  I  S  T  A  Y  L  Q  W  C  S  L  K  A  S  D  T  A
                    Query_13115  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACCACTCCATTAGCACCGCCTACCTGCAGTGGTGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (278/290)  IGHV5-51*01  186  ..................................A.G.....C.....................A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  A  R  R  G  H  T  Y  G  A  R  T  D  P  H  L  D  Y  W  G  Q  G  T  L  V  S  V
                    Query_13115  271  CATATATTACTGTGCGAGACGTGGACACACCTATGGAGCCCGAACCGACCCCCATCTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGT  360
V  95.9% (278/290)  IGHV5-51*01  276  ...G................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  87.5% (14/16)    IGHD5-18*01  1    --------------------.....T...G......------------------------------------------------------  16
J  97.6% (41/42)    IGHJ4*02     7    --------------------------------------------------------.............................A....  40

                                              
                                        S  S  
                    Query_13115  361  CTCCTCAG  368
J  97.6% (41/42)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_96598

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           366     2e-103
IGHD4-17*01                                                                                           18.0    0.58  
IGHJ3*01                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-17*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AAA	GACTACATTGACTAC	GAATT	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGAAAAGACTACATTGACTACGAATTATGCTTTTGATGTC	AKEKTTLTTNYAFDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13116  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-30*18  47   .......................................................G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  E  N  Y  K  Y  Y  A  D  S  V  K  G  R  I  T  I  S  R  D  N  S  
                    Query_13116  91   AGTGGGTGGCAGTTATATCATATGATGAAAATTATAAGTACTATGCAGACTCCGTGAAGGGCCGAATCACCATCTCCAGAGACAATTCCA  180
V  96.8% (242/250)  IGHV3-30*18  137  ...........................G..G.A....A...........................T........................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  E  K  T  T  L  T  T  
                    Query_13116  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTATATTACTGTGCCAAAGAAAAGACTACATTGACTACGA  270
V  96.8% (242/250)  IGHV3-30*18  227  ....................................................G...........G.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  86.7% (13/15)    IGHD4-17*01  2    -------------------------------------------------------------------------......GG.......--  16

                                      ---------------->                                  
                                      N  Y  A  F  D  V  W  G  Q  G  T  M  V  P  V  S  S  
                    Query_13116  271  ATTATGCTTTTGATGTCTGGGGCCAAGGGACAATGGTCCCCGTCTCTTCAG  321
J  97.9% (47/48)    IGHJ3*01     3    ---...................................A............  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_81533

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTG	TACAGTTATGGTT	TCCAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGTACAGTTATGGTTTCCAATACTACTTTGACTCC	ARLYSYGFQYYFDS	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  I  Y  D  Y  F  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_13117  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTATTTATGATTACTTCTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  92.0% (229/249)  IGHV4-39*01  49   ......................................C..C.G.AG.AG.....A.....G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  V  Y  Y  A  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13117  91   CTGGAGTGGATTGGGAGTGTCTATTATGCTGGGAACACCTACTACAACCCGTCCCTCAAGAGTCGAGTGACCATATCCGTAGACACGTCC  180
V  92.0% (229/249)  IGHV4-39*01  139  ..................A........AG.....G.................................C.....................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       E  N  Q  F  S  L  K  M  R  S  A  T  A  A  D  T  A  V  Y  F  C  A  R  L  Y  S  Y  G  F  Q 
                    Query_13117  181  GAGAACCAGTTCTCCCTGAAAATGAGGTCTGCGACCGCCGCAGACACGGCTGTGTATTTCTGTGCGAGATTGTACAGTTATGGTTTCCAA  270
V  92.0% (229/249)  IGHV4-39*01  229  A...................GC....C....T..........................A..........---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.3% (12/13)    IGHD5-18*01  6    ------------------------------------------------------------------------.....C.......-----  18

                                      -------------->                                  
                                       Y  Y  F  D  S  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_13117  271  TACTACTTTGACTCCTGGGGCCAGGGAGCCCTAGTCACCGTCTCCTCAG  319
J  93.8% (45/48)    IGHJ4*02     1    -............A.............A....G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_267696

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           364     5e-103
IGHD2-2*01                                                                                            23.8    0.011 
IGHJ5*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GAGGGAGTGCG	GTAGTATCAGCTGCT	TTCGGGGT	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGAGGGAGTGCGGTAGTATCAGCTGCTTTCGGGGTCAACTGGTTCGACCCC	AKGGSAVVSAAFGVNWFDP	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  P  G  F  T  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13118  1    GGTCCCTGAGACTCTCCTGTGCAGCCCCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-23*01  47   ..........................T..............................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  A  A  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13118  91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGCTGCCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCG  180
V  96.8% (241/249)  IGHV3-23*01  137  ..............................G.AG.......................................................A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      E  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  G  S  A  V  V  S  
                    Query_13118  181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGCCGAAGACACGGCCGTATATTACTGTGCGAAAGGAGGGAGTGCGGTAGTATCAG  270
V  96.8% (241/249)  IGHV3-23*01  227  ..............C.........................G............................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.3% (14/15)    IGHD2-2*01   12   --------------------------------------------------------------------------------......C...  21

                                      -IMGT----------------------->                                  
                                      A  A  F  G  V  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13118  271  CTGCTTTCGGGGTCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  93.3% (14/15)    IGHD2-2*01   22   .....----------------------------------------------------------  26
J  100.0% (50/50)   IGHJ5*02     2    -------------..................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_81532

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           377     1e-106
IGHD6-25*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	TACAGTCACCGGCTTCACTGGT	CGGCTAC	CAA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGTACAGTCACCGGCTTCACTGGTCGGCTACCAAGACTAC	AGVQSPASLVGYQDY	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	71	4	0	94.7
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	99	15	0	86.8
CDR3-IMGT (germline)	290	296	7	6	1	0	85.7
Total	N/A	N/A	295	268	27	0	90.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  R  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_13119  2    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCGGGAGGCACCTTCAGC  91
V  90.8% (268/295)  IGHV1-69*01  1    ...G...................G..........A.......................................T...............  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  F  M  P  I  F  G  A  A  D  Y 
                    Query_13119  92   AACTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGTTCATGCCTATCTTTGGTGCAGCGGACTAC  181
V  90.8% (268/295)  IGHV1-69*01  91   .G.....C.................................G..................A....C............A....AA.....  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  D  R  A  T  I  T  A  D  E  S  T  G  T  S  Y  M  E  L  R  N  L  K  S  E  D 
                    Query_13119  182  GCCCAGAAGTTCCAAGACAGAGCCACCATTACCGCGGACGAATCCACGGGCACATCCTATATGGAACTGAGGAACCTGAAATCTGAAGAC  271
V  90.8% (268/295)  IGHV1-69*01  181  ..A...........G.G.....T...G.....................A.....G....C.....G.....C.G.....G......G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  G  V  Q  S  P  A  S  L  V  G  Y  Q  D  Y  W  G  Q  G  T  L  V  T  V 
                    Query_13119  272  ACGGCCGTATATTACTGTGCGGGAGTACAGTCACCGGCTTCACTGGTCGGCTACCAAGACTACTGGGGCCAGGGAACCCTGGTCACCGTC  361
V  90.8% (268/295)  IGHV1-69*01  271  ........G............A...-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD6-25*01  12   -----------------------------------------------.......------------------------------------  18
J  100.0% (40/40)   IGHJ4*02     9    ---------------------------------------------------------.................................  41

                                             
                                       S  S  
                    Query_13119  362  TCCTCAG  368
J  100.0% (40/40)   IGHJ4*02     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_101061

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           316     2e-88
IGHD6-6*01                                                                                            12.2    33   
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-6*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGG	GCTCGT	TGTGATAATGCCATCTGCCCGAAAAACTTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTCGTTGTGATAATGCCATCTGCCCGAAAAACTTGCTGGTTCGACCCC	ARGLVVIMPSARKTCWFDP	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  D  I  S  I  N  T  G  D  Y  Y  W  S  W  F  R  Q  S  P  Q  K  G 
                    Query_13120  1    ACCCTGTCCCTCACCTGCACTGTCTCTGATATCTCCATCAACACCGGTGATTACTATTGGAGCTGGTTCCGCCAGTCCCCACAGAAGGGC  90
V  90.7% (225/248)  IGHV4-31*03  49   ............................G.GG........G..GT....G......C.........A........CA....GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  F  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S 
                    Query_13120  91   CTGGAATGGATTGGGTACATCTATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAGGAGTCGAGTTAGCATTTCCATAGACACGTCT  180
V  90.7% (225/248)  IGHV4-31*03  139  .....G..................................A.................A...........C...A..AG...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  V  V  I  M  P 
                    Query_13120  181  AAGAACCAGTTCTCCCTGAAGGTGAACTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGGGGGCTCGTTGTGATAATGCCA  270
V  90.7% (225/248)  IGHV4-31*03  229  .....................C...G...........................G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (6/6)     IGHD6-6*01   11   -----------------------------------------------------------------------......-------------  16

                                      3-IMGT----------------------->                                  
                                       S  A  R  K  T  C  W  F  D  P  W  G  P  G  T  L  V  S  V  S  S  
                    Query_13120  271  TCTGCCCGAAAAACTTGCTGGTTCGACCCCTGGGGCCCGGGAACCCTGGTCAGCGTCTCCTCAG  334
J  95.7% (45/47)    IGHJ5*02     5    -----------------....................A..............C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_219528

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           400     9e-114
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TTTCCAAGGCG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTCCAAGGCGACTACTCGGACTTC	ARDFQGDYSDF	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  T  C  K  A  S  G  Y  P  F  S  T  Y 
                    Query_13121  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCACCTGCAAGGCTTCTGGTTACCCCTTTAGCACCTAC  91
V  94.1% (273/290)  IGHV1-18*04  7    ......................................................T....................A......C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  H  G  L  E  W  L  G  W  I  S  G  H  N  G  N  T  K  N  A  Q 
                    Query_13121  92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACACGGGCTTGAGTGGCTGGGATGGATCAGCGGTCACAATGGCAACACAAAAAATGCACAG  181
V  94.1% (273/290)  IGHV1-18*04  97   ................................A............A...............C.T.......T........CT........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  D  R  V  T  M  T  T  D  T  S  T  T  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_13121  182  AAGTTCCAGGACAGAGTCACCATGACCACAGACACATCCACGACCACAGCGTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.1% (273/290)  IGHV1-18*04  187  ...C......G................................G......C.......................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  D  F  Q  G  D  Y  S  D  F  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_13121  272  GTATATTATTGTGCGAGAGATTTCCAAGGCGACTACTCGGACTTCTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  350
V  94.1% (273/290)  IGHV1-18*04  277  ..G.....C...........-----------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                              
J  91.7% (44/48)    IGHJ4*02     1    -------------------------------......TT....A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_219529

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           371     7e-105
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	ARPSSASGWHFDN	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	263	26	0	91


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_13122  1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCGGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCAGTTA  90
V  91.0% (263/289)  IGHV5-51*03  6    .........................G.............G.........................G.........C.GC..T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  L  L  P  H  D  S  D  I  R  Y  S  P
                    Query_13122  91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCCTCTTACCTCATGACTCTGATATTAGATATAGTCC  180
V  91.0% (263/289)  IGHV5-51*03  96   C.......G..............................................A...AT...GG...........CC.....C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  R  W  S  S  L  K  A  S  D  T  G
                    Query_13122  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACACCGG  270
V  91.0% (263/289)  IGHV5-51*03  186  .............................C..A.AA........G..............A.............................C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13122  271  CATGTATTACTGTGCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  91.0% (263/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_98916

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACCCCCTTTTGACTAC	ARDPAVVVQWVAGTGPPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13123  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13123  91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_13123  181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  P  P  F  D  Y  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_13123  271  GGGTGGCTGGTACAGGACCCCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCGCCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  95.3% (41/43)    IGHJ4*02     6    -----------------------..........................G...A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_219524

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           325     2e-91
IGHD6-19*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CAAGGAGT	AGTGGCTGG	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGCAAGGAGTAGTGGCTGGCTTGACTCC	ARARSSGWLDS	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  S  D  Y  W  S  W  I  R  K  P  P  G  K  G  L  E 
                    Query_13124  1    ACCCTGTCCCTCACCTGCACTGTCTCCGGGGGCTCCATAACTAGTGACTACTGGAGCTGGATCCGGAAGCCCCCTGGGAAGGGACTGGAG  90
V  92.6% (226/244)  IGHV4-59*01  49   ..........................T..T........C.G....T....................C.......A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  D  Y  N  S  S  L  K  S  R  V  T  I  S  F  D  R  S  K  N 
                    Query_13124  91   TGGATTGGATATATCTATTACAGTGGGAGCACCGACTACAATTCCTCCCTCAAGAGTCGAGTCACCATATCATTTGACAGGTCCAAGAAC  180
V  92.6% (226/244)  IGHV4-59*01  139  ........G........................A.......CC.............................G.A....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  R  S  S  G  W  L  D  S 
                    Query_13124  181  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGCGAGCAAGGAGTAGTGGCTGGCTTGACTCC  270
V  92.6% (226/244)  IGHV4-59*01  229  ...............C....C..........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD6-19*01  10   ------------------------------------------------------------------------.........---------  18
J  97.5% (39/40)    IGHJ4*02     7    ----------------------------------------------------------------------------------......A.  14

                                                                      
                                       W  G  Q  G  T  L  V  T  V  S  S
                    Query_13124  271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  302
J  97.5% (39/40)    IGHJ4*02     15   ................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_219525

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           330     1e-92
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	GGTAAAGACCCCGGAGGGCGCCC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTAAAGACCCCGGAGGGCGCCCACTTCTCCTACTACGGGATGGACGTC	ARVKTPEGAHFSYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	229	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  D  Y  T  L  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13125  1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCACCTTCAGTGATTATACTCTGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  92.7% (229/247)  IGHV3-21*01  47   ........................C...................AGC....GCA...............................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  S  S  G  Y  Y  I  Y  Y  A  D  S  V  N  G  R  F  T  I  S  R  D  N  A  
                    Query_13125  91   AGTGGGTCTCATCCGTTAGCAGTAGTGGTTATTACATATACTACGCAGACTCAGTGAACGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.7% (229/247)  IGHV3-21*01  137  ..............A....T......A..AG...........................G...............................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  V  Y  L  Q  M  N  N  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  K  T  P  E  G  A  
                    Query_13125  181  AGAACTCAGTGTATCTGCAAATGAACAACCTGAGAGCCGACGACACGGCTGTTTATTACTGTGCGAGGGTAAAGACCCCGGAGGGCGCCC  270
V  92.7% (229/247)  IGHV3-21*01  227  ........C..................G............G...........G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      IMGT--------------------->                                 
                                      H  F  S  Y  Y  G  M  D  V  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_13125  271  ACTTCTCCTACTACGGGATGGACGTCTGGGGCCAGGGGACCGCGGTCACCGTCTCCTCA  329
J  91.5% (54/59)    IGHJ6*02     4    ...A..A.........T.................A......A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_219526

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           416     2e-118
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	CCTTGAACATCCA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCTTGAACATCCATGATGCTTTTGATATC	ARALNIHDAFDI	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  T  Y
                    Query_13126  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGTAAGGCTTCTGGAGGCACCTTCAGCACCTA  90
V  95.9% (278/290)  IGHV1-69*06  6    ..................G.........................................C.........................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  L  N  Y  A  Q
                    Query_13126  91   TGCTATCACCTGGGTGCGACAGGCCCCTGGCCAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATATTTGGTACACTAAACTACGCACA  180
V  95.9% (278/290)  IGHV1-69*06  96   ........G.....................A...................................C.........GC............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  I  T  I  T  A  D  K  S  T  S  T  A  H  M  E  L  S  S  L  K  S  D  D  T  A
                    Query_13126  181  GAAGTTCCAGGGCAGAATCACGATTACCGCGGACAAATCCACGAGCACAGCCCACATGGAGCTGAGCAGCCTGAAATCTGATGACACGGC  270
V  95.9% (278/290)  IGHV1-69*06  186  ................G...................................T.....................G......G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  R  A  L  N  I  H  D  A  F  D  I  W  G  Q  G  T  M  V  T  L  S  S  
                    Query_13126  271  CGTGTATTACTGTGCGAGAGCCTTGAACATCCATGATGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCCTCTCTTCAG  353
V  95.9% (278/290)  IGHV1-69*06  276  ....................---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
J  98.0% (49/50)    IGHJ3*02     1    ---------------------------------........................................G.........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_219527

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           427     9e-122
IGHD1-26*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCG	AGTGGGAGCTACT	TGGGGCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTAC	ARDLEWELLGAFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	282	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  R  Y
                    Query_13127  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGATA  90
V  96.9% (282/291)  IGHV1-69*06  6    ..................G....................................................................C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  S  F  G  T  A  H  Y  A  Q
                    Query_13127  91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTAGCTTTGGAACAGCACACTACGCACA  180
V  96.9% (282/291)  IGHV1-69*06  96   .................................................................T......T......A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  R  S  T  S  T  A  Y  M  E  L  S  S  L  S  S  E  D  T  A
                    Query_13127  181  GAGATTCCAGGGCAGAGTCACGATTACCGCGGACAGATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGCTCTGAGGACACGGC  270
V  96.9% (282/291)  IGHV1-69*06  186  ..AG...............................A.......................................A..............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  D  L  E  W  E  L  L  G  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13127  271  CGTGTATTACTGTGCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  96.9% (282/291)  IGHV1-69*06  276  .....................--------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                       
D  100.0% (13/13)   IGHD1-26*01  6    --------------------------.............--------------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     6    ----------------------------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_219520

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           321     7e-90
IGHD3-10*01                                                                                           12.2    33   
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCCGATCA	ACTTTGGTT	TCTTGGGACCACAGTCGGGATTG	TACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCCGATCAACTTTGGTTTCTTGGGACCACAGTCGGGATTGTACTCTGACTAC	ARSPINFGFLGPQSGLYSDY	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  K 
                    Query_13128  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCCTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGAAG  90
V  92.2% (224/243)  IGHV4-34*01  49   ....................................T..............................................G...G..  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  L  R  G  G  T  N  Y  H  P  S  L  K  S  R  A  S  I  S  T  D  A  S  K  N 
                    Query_13128  91   TGGATTGGGGAAATCAATCTTCGTGGAGGCACCAACTACCACCCGTCCCTCAAGAGTCGGGCCTCCATATCAACGGACGCGTCGAAGAAT  180
V  92.2% (224/243)  IGHV4-34*01  139  ...................A.A.....A...........A...................A.T.A........GTA...A....C.....C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  I  N  F  G  F  L  G 
                    Query_13128  181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCCGCGGACACGGCTGTATATTACTGTGCGAGAAGCCCGATCAACTTTGGTTTCTTGGGA  270
V  92.2% (224/243)  IGHV4-34*01  229  ...................GC..........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (8/9)      IGHD3-10*01  6    -------------------------------------------------------------------------...A.....--------  14

                                      GT------------------------>                                  
                                       P  Q  S  G  L  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13128  271  CCACAGTCGGGATTGTACTCTGACTACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  331
J  95.7% (44/46)    IGHJ4*02     3    ---------------....T..................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_219522

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           285     4e-79
IGHD4-17*01                                                                                           12.2    32   
IGHJ2*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-17*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACAGTTTTTCTCCGCCGTCG	GACTAC	TT	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATAACAGTTTTTCTCCGCCGTCGGACTACTTCTTCGATCTC	SEITVFLRRRTTSSIS	242	289	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	29	27	1	1	93.1
CDR1-IMGT	29	52	24	19	5	0	79.2
FR2-IMGT	53	103	51	49	2	0	96.1
CDR2-IMGT	104	127	24	16	8	0	66.7
FR3-IMGT	128	241	114	101	13	0	88.6
CDR3-IMGT (germline)	242	249	8	6	2	0	75
Total	N/A	N/A	250	218	31	1	87.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L   N  S  P  V  Q  P  L  D  S  P  S  R  T  T  T  *  T  G  S  A  R  L  Q  G  S  G  W 
                    Query_13129  1    GGTCCCTGA-ACTCTCCTGTACAGCCTCTGGATTCACCTTCAAGAACTACAACATGAACTGGGTCCGCCAGGCTCCAGGGAAGCGGCTGG  89
V  87.2% (218/250)  IGHV3-21*01  47   .........G..........G.....................GT.G...T.G...............................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       S  G  S  H  R  L  E  V  E  T  M  T  S  T  T  Q  T  Q  *  R  A  E  S  P  S  P  E  T  T  P 
                    Query_13129  90   AGTGGGTCTCATCGATTAGAGGTAGAAACAATGACATCCACTACGCAGACTCAATGAAGGGCCGAATCACCATCTCCAGAGACAACGCCA  179
V  87.2% (218/250)  IGHV3-21*01  137  .............C.....TA....T.GT.G.T....AT..............G...........T........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                       T  T  H  S  I  S  T  C  T  A  W  E  P  R  T  R  L  S  I  S  A  S  E  I  T  V  F  L  R  R 
                    Query_13129  180  ACAACTCACTCTATCTCCACATGCACAGCCTGGGAGCCGAGGACACGGCTATCTATTTCTGCGTCAGAGATAACAGTTTTTCTCCGCCGT  269
V  87.2% (218/250)  IGHV3-21*01  227  .G........G.....G..A...A........A.................G.G....A...T.CG.....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      T------------------>                                  
                                       R  T  T  S  S  I  S  G  A  V  A  P  Q  S  L  S  P  Q 
                    Query_13129  270  CGGACTACTTCTTCGATCTCTGGGGCCGTGGCACCCCAGTCTCTGTCTCCTCAG  323
D  100.0% (6/6)     IGHD4-17*01  2    --......----------------------------------------------  7
J  93.2% (41/44)    IGHJ2*01     10   ----------..........................TG...A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_219523

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           353     1e-99
IGHD6-19*01                                                                                           18.0    0.60 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	235	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13130  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (235/244)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13130  91   TGGATTGGGTATATCTTTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  96.3% (235/244)  IGHV4-59*01  139  ................A.........................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  W  G 
                    Query_13130  181  CAATTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCTGGGGA  270
V  96.3% (235/244)  IGHV4-59*01  229  ..G...........GC............C...T...........C........C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------....G.......---  18

                                      GT------------------------>                                 
                                       T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_13130  271  ACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  330
J  91.7% (44/48)    IGHJ6*02     15   ------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_4296

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           332     3e-93
IGHD6-6*01                                                                                            10.3    121  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAAA	TTTTCCA	CGTCC	CTCCTGCCGCAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAATTTTCCACGTCCCTCCTGCCGCAATACGGTATGGACGTC	VKFSTSLLPQYGMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	230	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  N  Y  I  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13131  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAATAACTATATTCTGCACTGGGTCCGCCAGGCTCCCGGGAAGGGACTGG  90
V  92.7% (230/248)  IGHV3-64*05  47   ..........................................G..G....GC.A......................A.............  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  F  V  S  A  I  S  S  N  G  D  S  T  Y  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13131  91   AATTTGTTTCAGCTATTAGCAGTAATGGAGATAGCACATACTCCGCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  92.7% (230/248)  IGHV3-64*05  137  ...A...............T........G.G...........A...............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  G  V  Y  Y  C  V  K  F  S  T  S  L  L  P  
                    Query_13131  181  AGAACACATTGTTTCTTCAAATGAACAGTCTGAGAGCTGAGGACACGGGTGTATATTACTGTGTGAAATTTTCCACGTCCCTCCTGCCGC  270
V  92.7% (230/248)  IGHV3-64*05  227  .......GC...A.G.........G.......................C...G...............----------------------  294
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (5/5)     IGHD6-6*01   14   ---------------------------------------------------------------------------.....----------  18

                                      ---------------->                                 
                                      Q  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13131  271  AATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  100.0% (48/48)   IGHJ6*02     15   --................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_267691

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           385     4e-109
IGHD1-1*01                                                                                            10.3    117   
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TA	GAACG	GCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATAGAACGGCATTTGACTAC	TRDRTAFDY	249	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	30	0	0	100
FR3-IMGT	135	248	114	113	1	0	99.1
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	251	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  G  D  Y  G  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_13132  1    GGTCCCTGAGACTCTCCTGTTCAGCTTCTGGATTCACCTTTGGTGATTATGGTCTGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (251/256)  IGHV3-49*04  47   ....................A..............................C.A...G................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_13132  91   AGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  98.0% (251/256)  IGHV3-49*04  137  ..........................................................................................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------CDR3-IMGT----
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  T  R  D  R  T  A  F  
                    Query_13132  181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAAGCGAGGACACAGCCGTGTATTACTGTACTAGAGATAGAACGGCATTTG  270
V  98.0% (251/256)  IGHV3-49*04  227  ..........................................C.................................--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (5/5)     IGHD1-1*01   11   ------------------------------------------------------------------------------.....-------  15
J  100.0% (43/43)   IGHJ4*02     6    --------------------------------------------------------------------------------------....  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13132  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (43/43)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_101065

Length=314
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            358     3e-101
IGHD2-8*01                                                                                            12.2    29    
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	TGGTGT	GCGG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGGTGTGCGG	ASGVR	243	257	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  S  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13133  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAACAGTTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (238/247)  IGHV3-7*01   47   .............................................G.TA.........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  P  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13133  91   AGTGGGTGGCCAACATAAAGCCAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (238/247)  IGHV3-7*01   137  .....................A....................................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--CDR3-IMGT-->             
                                      K  S  S  L  F  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  S  G  V  R  W  G  Q  G  
                    Query_13133  181  AAAGCTCACTGTTTCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGCGAGTGGTGTGCGGTGGGGCCAGGGAA  270
V  96.4% (238/247)  IGHV3-7*01   227  .G.A........A.......................C..............................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD2-8*01   16   -------------------------------------------------------------------......-----------------  21
J  100.0% (34/34)   IGHJ4*02     15   -----------------------------------------------------------------------------.............  27

                                                           
                                      T  L  V  T  V  S  S  
                    Query_13133  271  CCCTGGTCACCGTCTCCTCAG  291
J  100.0% (34/34)   IGHJ4*02     28   .....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30304617


Query= Query_98911

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           353     9e-100
IGHD4-17*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCACGACA	ACTACGGT	TTTAACACGGGGAACC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACGACAACTACGGTTTTAACACGGGGAACCTTGACTAC	ARGHDNYGFNTGNLDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	235	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13134  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (235/244)  IGHV4-59*01  49   .......................................................G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  F  N  Y  N  P  S  L  S  S  R  V  T  I  S  V  D  T  S  R  N 
                    Query_13134  91   TGGATTGGATATATCTATTACAGTGGGAGTTTCAACTACAACCCCTCCCTCAGCAGTCGAGTCACCATATCAGTAGACACGTCCAGGAAC  180
V  96.3% (235/244)  IGHV4-59*01  139  ........G....................CAC....................AG...............................A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  D  N  Y  G  F  N  T 
                    Query_13134  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGGTCACGACAACTACGGTTTTAACACG  270
V  96.3% (235/244)  IGHV4-59*01  229  ...............................................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD4-17*01  3    -------------------------------------------------------------------------........---------  10

                                      -------------->                                  
                                       G  N  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13134  271  GGGAACCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (42/42)   IGHJ4*02     7    -------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_101067

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-3*01                                                                                            35.3    4e-06
IGHJ6*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACGATTTTTGGAGTGGTT	GAGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACGATTTTTGGAGTGGTTGAGCATGGACGTG	ARGRFLEWLSMDV	261	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	44	6	0	88
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	49	2	0	96.1
CDR2-IMGT	126	146	21	18	3	0	85.7
FR3-IMGT	147	260	114	106	8	0	93
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	245	22	0	91.8


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  I  C  S  V  N  G  G  S  I  N  T  Y  F  W  S  W  I  R  
                    Query_13135  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCATCTGCAGTGTCAACGGTGGCTCCATCAATACTTACTTCTGGAGCTGGATCCGGC  90
V  91.8% (245/267)  IGHV4-59*01  26   ................T...................C.....C....TCT.............G..G.....A.................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  S  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  A  T  S  Y  N  P  S  L  T  S  R  V  T  
                    Query_13135  91   AGTCCCCAGGGAAGGGACTGGAGTGGATTGGCTATATCTACTACAGTGGGGCCACCAGTTACAATCCCTCCCTCACGAGTCGAGTCACCA  180
V  91.8% (245/267)  IGHV4-59*01  116  ..C............................G........T.........AG.....AC.....C..........A..............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  T  P  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  
                    Query_13135  181  TATCAGTAGACACGTCCAAGAACCAGTTTTCCCTGAAGCTGACCCCTGCGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGAC  270
V  91.8% (245/267)  IGHV4-59*01  206  ............................C.............G.T...T......................................---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     
D  100.0% (18/18)   IGHD3-3*01   6    ----------------------------------------------------------------------------------------..  7

                                      -----CDR3-IMGT-------------->                                 
                                      R  F  L  E  W  L  S  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_13135  271  GATTTTTGGAGTGGTTGAGCATGGACGTGTGGGGCCAAGGGACCACAGTCATCGTCTCCTCA  332
D  100.0% (18/18)   IGHD3-3*01   8    ................----------------------------------------------  23
J  92.9% (39/42)    IGHJ6*02     21   --------------------........C.................G....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_121374

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           377     8e-107
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	242	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13136  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.6% (242/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13136  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  99.6% (242/243)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_13136  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  99.6% (242/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13136  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_232430

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         322     2e-90
IGHD3-22*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	TCACCCAC	TGATAGTA	ATAATAT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGATCACCCACTGATAGTAATAATATC	ARSPTDSNNI	241	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	226	20	0	91.9


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  V  G  S  G  Y  Y  W  G  W  I  R  Q  S  P  G  K  G  L 
                    Query_13137    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCGTCGGCAGTGGTTATTACTGGGGCTGGATCCGGCAGTCCCCAGGGAAGGGGCTG  90
V  91.9% (226/246)  IGHV4-38-2*01  49   ....................................A..A..........C.....................C.................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  A  T  I  H  H  S  G  S  T  H  Y  N  P  S  L  K  S  R  V  L  I  S  I  D  T  S  M 
                    Query_13137    91   GAGTGGATTGCGACTATCCATCATAGTGGCAGCACCCACTACAACCCGTCCCTCAAGAGTCGAGTTCTTATATCAATAGACACGTCCATG  180
V  91.9% (226/246)  IGHV4-38-2*01  139  ..........G..G....T..........G......T............................CACC......G............A.  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------CDR3-IMGT--------->
                                         N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  S  P  T  D  S  N  N  I 
                    Query_13137    181  AACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCATTTATTACTGTGCAAGATCACCCACTGATAGTAATAATATC  270
V  91.9% (226/246)  IGHV4-38-2*01  229  ................A......C........................G.G...........G...------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (8/8)     IGHD3-22*01    10   --------------------------------------------------------------------------........--------  17
J  97.1% (34/35)    IGHJ4*02       14   -----------------------------------------------------------------------------------------.  14

                                                                          
                                         W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_13137    271  TGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  304
J  97.1% (34/35)    IGHJ4*02       15   ................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_351545

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           338     5e-95
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAC	TGAGGCCCAATC	ACTATGAAAGTAGTGGT	CTCTGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACTGAGGCCCAATCACTATGAAAGTAGTGGTCTCTGGCACTACTGTTTGGACGTC	ATLRPNHYESSGLWHYCLDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	230	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13138  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTAGTTATTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.3% (230/244)  IGHV4-59*08  49   ......................................C........C..........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  T  H  Y  S  G  S  A  K  Y  N  P  S  L  K  S  R  V  T  I  S  E  D  T  S  K  N 
                    Query_13138  91   TGGATTGGGAATACCCATTACAGTGGGAGCGCCAAATACAATCCCTCCCTTAAGAGTCGAGTCACCATATCAGAGGACACGTCCAAGAAC  180
V  94.3% (230/244)  IGHV4-59*08  139  .........T...T.T..............A....C.....C........C......................TA...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  V  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  T  L  R  P  N  H  Y  E  S  S 
                    Query_13138  181  CAGGTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTTCTGTGCGACACTGAGGCCCAATCACTATGAAAGTAGT  270
V  94.3% (230/244)  IGHV4-59*08  229  ...T................................................A........G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD3-22*01  6    ----------------------------------------------------------------------------.......T......  19

                                      GT------------------------>                                 
                                       G  L  W  H  Y  C  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13138  271  GGTCTCTGGCACTACTGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
D  94.1% (16/17)    IGHD3-22*01  20   ...---------------------------------------------------------  22
J  96.0% (48/50)    IGHJ6*02     13   ----------.....G..A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_351544

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD3-22*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCCGTTG	ATTACTATGAAAGTACTTGTTATT	CT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGTTGATTACTATGAAAGTACTTGTTATTCTTAC	ARAVDYYESTCYSY	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	70	4	0	94.6
CDR1-IMGT	76	99	24	17	7	0	70.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	105	9	0	92.1
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	271	22	0	92.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  R  I  S  C  R  V  S  G  D  M  F  G  
                    Query_13139  2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGCTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGTTTCTGGAGACATGTTCGGCA  91
V  92.5% (271/293)  IGHV5-51*01  2    .............................G........................A...........A..G.......T...GC..TAC..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_13139  92   GTTACTGGATCGCCTGGGTGCGCCAGATGCCCGGCAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  181
V  92.5% (271/293)  IGHV5-51*01  92   .C..........G.....................G.......................................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  R  V  T  F  S  V  D  T  S  L  S  T  A  Y  V  Q  W  S  S  L  K  P  S  D  
                    Query_13139  182  GCCCGTCATTCCAAGGCCGGGTCACCTTCTCAGTCGACACGTCCCTCAGCACCGCCTACGTGCAGTGGAGCAGCCTGAAGCCCTCGGACA  271
V  92.5% (271/293)  IGHV5-51*01  182  .......C..........A.......A......C.....A....A..............C....................G.........  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  I  Y  Y  C  A  R  A  V  D  Y  Y  E  S  T  C  Y  S  Y  W  G  Q  G  T  L  V  S  V  S  
                    Query_13139  272  CCGCCATATATTACTGTGCGAGAGCCGTTGATTACTATGAAAGTACTTGTTATTCTTACTGGGGCCAGGGAACCCTGGTCTCCGTCTCCT  361
V  92.5% (271/293)  IGHV5-51*01  272  .......G...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  87.5% (21/24)    IGHD3-22*01  3    ------------------------------..........T....G.G......------------------------------------  26
J  97.3% (36/37)    IGHJ4*02     12   --------------------------------------------------------........................A.........  45

                                         
                                      S  
                    Query_13139  362  CAG  364
J  97.3% (36/37)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_351547

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           343     2e-96
IGHD2-15*01                                                                                           37.2    1e-06
IGHJ5*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TCGATGGCGC	ATATTGTAGTGGTGGTAAGTGCTAC	GACGC	GTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTCGATGGCGCATATTGTAGTGGTGGTAAGTGCTACGACGCGTTGGACTCC	AKVDGAYCSGGKCYDALDS	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  S  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  T  G  L  
                    Query_13140  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATCCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGACGGGGCTGG  90
V  94.0% (234/249)  IGHV3-23*01  47   .................................T...............................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  A  G  G  V  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13140  91   AGTGGGTCTCAGGTATCAGTGCTGGTGGTGTTGGCACATACTACGCAGACTCCGTTAAGGGCCGCTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (234/249)  IGHV3-23*01  137  ............C...T....G.A......G.A......................G........G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  V  D  G  A  Y  C  S  
                    Query_13140  181  AGAACACACTATATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCCTTTATTACTGTGCGAAAGTCGATGGCGCATATTGTAGTG  270
V  94.0% (234/249)  IGHV3-23*01  227  .......G..G............A..........................G.A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.0% (23/25)    IGHD2-15*01  4    -------------------------------------------------------------------------------...........  14

                                      -IMGT----------------------->                                  
                                      G  G  K  C  Y  D  A  L  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13140  271  GTGGTAAGTGCTACGACGCGTTGGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  333
D  92.0% (23/25)    IGHD2-15*01  15   ......GC......-------------------------------------------------  28
J  93.2% (41/44)    IGHJ5*01     8    -------------------...C..............A....................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_351546

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           266     2e-73
IGHD6-19*01                                                                                           16.1    2.4  
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCAGTATCA	AGTGGCTG	CCATCAGAACTCCCCCTTGG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCAGTATCAAGTGGCTGCCATCAGAACTCCCCCTTGGGACTCC	ARGQYQVAAIRTPPWDS	265	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	150	48	19	2	27	39.6
FR3-IMGT	151	264	114	99	15	0	86.8
CDR3-IMGT (germline)	265	272	8	8	0	0	100
Total	N/A	N/A	272	223	22	27	82


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13141  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAATTGGATCCGCCAGTCCCCAGGGAAGGGTCTGGAG  90
V  82.0% (223/272)  IGHV4-34*01  49   .......................................................GC............C.............G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-------------------CDR2-IMGT------------------><-----------------------------
                                       W  I  G  E  I  N  H  D  V  G  S  W  E  F  K  N  R  G  S  A  D  Y  N  P  S  L  K  S  R  V 
                    Query_13141  91   TGGATTGGAGAAATCAATCATGATGTAGGCAGCTGGGAATTCAAGAATCGTGGAAGCGCCGACTACAACCCGTCCCTCAAGAGTCGAGTC  180
V  82.0% (223/272)  IGHV4-34*01  139  ........G............A---------------------------........A..A.............................  201
                                       W  I  G  E  I  N  H                             S  G  S  T  N  Y  N  P  S  L  K  S  R  V 

                                      -----------------------FR3-IMGT----------------------------------------------------><-----
                                       T  I  S  L  D  T  S  K  T  Q  F  S  L  R  M  T  S  A  T  P  A  D  T  G  V  Y  Y  C  A  R 
                    Query_13141  181  ACCATTTCCTTGGACACGTCCAAGACCCAGTTCTCCCTGAGAATGACCTCTGCGACCCCCGCGGACACGGGTGTCTATTACTGCGCGAGA  270
V  82.0% (223/272)  IGHV4-34*01  202  .....A..AG.A.............A..............AGC...G.....T....G............C...G........T......  291
                                       T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R 

                                      ---------------CDR3-IMGT-------------------->                                  
                                       G  Q  Y  Q  V  A  A  I  R  T  P  P  W  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_13141  271  GGCCAGTATCAAGTGGCTGCCATCAGAACTCCCCCTTGGGACTCCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  349
V  82.0% (223/272)  IGHV4-34*01  292  ..-----------------------------------------------------------------------------  293
                                       G                                                                             
D  100.0% (8/8)     IGHD6-19*01  10   -----------........------------------------------------------------------------  17
J  95.0% (38/40)    IGHJ4*02     9    ---------------------------------------....A..............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_351540

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-20*01                                                                                           316     2e-88
IGHD3-22*01                                                                                           12.2    31   
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-20*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGGGCACTG	GGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGCGAGATGGGGCACTGGGTTATTACTATGGTATCGACGTC	VRDGALGYYYGIDV	235	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	19	21	3	3	0	0	100
CDR1-IMGT	22	45	24	24	0	0	100
FR2-IMGT	46	96	51	50	1	0	98
CDR2-IMGT	97	120	24	20	4	0	83.3
FR3-IMGT	121	234	114	110	4	0	96.5
CDR3-IMGT (germline)	235	242	8	6	2	0	75
Total	N/A	N/A	224	213	11	0	95.1


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  H  W  N 
                    Query_13142  19   TCTGGATTCACCTTTGATGATTATGGCATGAGCTGGGTCCGCCAAGCTCCGGGGAAGGGGCTGGAGTGGGTCTCTGGTATTCATTGGAAT  108
V  95.1% (213/224)  IGHV3-20*01  73   ..................................................A..............................A........  162
                                       S  G  F  T  F  D  D  Y  G  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I  N  W  N 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  A  S  T  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  A  K  N  S  L  Y  L  Q  M  N 
                    Query_13142  109  GGTGCAAGTACAGCTTATGCAGACTCTGTGAAGGGCCGATTCACCATTTCCAGAGACATTGCCAAGAACTCCCTGTATCTGCAAATGAAC  198
V  95.1% (213/224)  IGHV3-20*01  163  ....GT..C....G.................................C..........AC..............................  252
                                       G  G  S  T  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><----------------CDR3-IMGT--------------->            
                                       S  L  R  A  E  D  T  A  L  Y  H  C  V  R  D  G  A  L  G  Y  Y  Y  G  I  D  V  W  G  R  G 
                    Query_13142  199  AGTCTGAGAGCCGAGGACACGGCCTTGTATCACTGTGTGCGAGATGGGGCACTGGGTTATTACTATGGTATCGACGTCTGGGGCCGAGGG  288
V  95.1% (213/224)  IGHV3-20*01  253  .....................................C.A....----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  L  Y  H  C  A  R                                                 
D  100.0% (6/6)     IGHD3-22*01  20   ------------------------------------------------------......------------------------------  25
J  94.1% (48/51)    IGHJ6*02     12   ------------------------------------------------------------.....C.....G.............A....  41

                                                           
                                       T  T  V  T  V  S  S 
                    Query_13142  289  ACCACGGTCACCGTCTCCTCA  309
J  94.1% (48/51)    IGHJ6*02     42   .....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_351543

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         347     7e-98
IGHD6-13*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGTGGGGTGCGTTATGC	CAGCAGCTGGTAC	GG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTGGGGTGCGTTATGCCAGCAGCTGGTACGGCTAC	ARGGVRYASSWYGY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	246	6	6	0	0	100
Total	N/A	N/A	246	234	12	0	95.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  L 
                    Query_13143    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCATCAGCAGCGGTTACTACTGGGGCTGGCTCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  95.1% (234/246)  IGHV4-38-2*01  49   ............................................T..................A..........................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  T  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K 
                    Query_13143    91   GAGTGGATTGGGACTATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACTATGTCAGTAGACACGTCCAAG  180
V  95.1% (234/246)  IGHV4-38-2*01  139  .............G.................G....................................C..A..................  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  H  F  S  L  K  L  S  S  V  T  A  A  Y  T  A  V  F  Y  C  A  R  G  G  V  R  Y  A  S  S 
                    Query_13143    181  AACCACTTCTCCCTAAAGCTGAGCTCTGTGACGGCCGCTTACACGGCCGTGTTTTACTGTGCGAGAGGTGGGGTGCGTTATGCCAGCAGC  270
V  95.1% (234/246)  IGHV4-38-2*01  229  .....G........G.................C.....AG............A.............------------------------  294
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (13/13)   IGHD6-13*01    9    -----------------------------------------------------------------------------------.......  15

                                        ----------->                                
                                         W  Y  G  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13143    271  TGGTACGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  314
D  100.0% (13/13)   IGHD6-13*01    16   ......--------------------------------------  21
J  100.0% (36/36)   IGHJ4*02       11   --------....................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_351542

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_13144  1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_13144  91   GAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ...................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_13144  181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13144  271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_351549

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           375     3e-106
IGHD6-13*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCTCGCCACAGAA	AGCAGCAGCT	ATAACTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCTCGCCACAGAAAGCAGCAGCTATAACTTACTACTTTGACTAC	ARVSPQKAAAITYYFDY	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	242	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  H  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13145  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACCACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.2% (242/244)  IGHV4-59*01  49   ................................................T.........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13145  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  99.2% (242/244)  IGHV4-59*01  139  ..........................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  P  Q  K  A  A  A  I 
                    Query_13145  181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTCTCGCCACAGAAAGCAGCAGCTATA  270
V  99.2% (242/244)  IGHV4-59*01  229  ....................C...........................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  7    -----------------------------------------------------------------------------..........---  16

                                      ----------------->                                  
                                       T  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13145  271  ACTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  100.0% (48/48)   IGHJ4*02     1    ----................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_351548

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            355     3e-100
IGHD6-19*01                                                                                           27.6    7e-04 
IGHJ3*01                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCATAC	AGCAGTGGCTGGTA	N/A	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCATACAGCAGTGGCTGGTATGATGCTTTTGACTTC	ARAYSSGWYDAFDF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13146  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCTCCTTTAGTTCGTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (237/247)  IGHV3-7*01   47   ...................................A........AGC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  N  Q  D  A  S  A  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13146  91   AGTGGGTGGCCAACATAAACCAAGATGCAAGTGCGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (237/247)  IGHV3-7*01   137  ...................G.......G.....A........................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  Y  S  S  G  W  Y  
                    Query_13146  181  AGAACTCACTGTTTTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCAGTGTATTACTGTGCGAGGGCATACAGCAGTGGCTGGTATG  270
V  96.0% (237/247)  IGHV3-7*01   227  ............A.C..................................T.................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (14/14)   IGHD6-19*01  7    --------------------------------------------------------------------------..............--  20
J  92.0% (46/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------------..  2

                                      ------------->                                  
                                      D  A  F  D  F  W  G  P  G  T  M  V  T  V  S  S  
                    Query_13146  271  ATGCTTTTGACTTCTGGGGCCCAGGGACGATGGTCACCGTCTCTTCAG  318
J  92.0% (46/50)    IGHJ3*01     3    ..........TG.........A......A...................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_98910

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           346     2e-97
IGHD6-19*01                                                                                           16.1    2.4  
IGHJ6*02                                                                                              110     2e-28


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCCGTCCCCATG	GCATTGGCTGG	CACCCCCGTGAACT	TTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCCGTCCCCATGGCATTGGCTGGCACCCCCGTGAACTTTATTACTACTACTACGGTATGGACGTC	ARVRPHGIGWHPRELYYYYYGMDV	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  S  F  S  N  Y  G  F  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_13147  1    GGTCCCTGAGACTCTCCTGTGCAGTGTCTGGATTCTCCTTCAGTAACTATGGCTTCCACTGGGTCCGCCAGGCTCCAGGCAGGGGGCTGG  90
V  94.4% (235/249)  IGHV3-33*01  47   ........................C..........A.........G.......A.G.........................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  Y  D  G  S  N  M  Y  Y  A  D  S  V  K  G  R  F  A  I  S  R  D  N  S  
                    Query_13147  91   AGTGGGTGGCACTTATATGGTATGATGGAAGTAATATGTACTATGCAGACTCCGTGAAGGGCCGGTTCGCCATCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-33*01  137  ...........G........................AA..........................A...A.....................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  R  P  H  G  I  G  
                    Query_13147  181  AGAACACGCTGTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGCGAGTCCGTCCCCATGGCATTGGCT  270
V  94.4% (235/249)  IGHV3-33*01  227  ................G...................................G............A...---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD6-19*01  8    ---------------------------------------------------------------------------------...G.....  16

                                      ----CDR3-IMGT------------------------------>                                
                                      W  H  P  R  E  L  Y  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_13147  271  GGCACCCCCGTGAACTTTATTACTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  346
D  90.9% (10/11)    IGHD6-19*01  17   ..--------------------------------------------------------------------------  18
J  98.3% (59/60)    IGHJ6*02     2    ----------------...C........................................................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_121378

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHD5-12*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGCGGGA	TGGCTAC	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGACAGGTGCGGGATGGCTACCTGACTAC	VTGAGWLPDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	5	2	0	71.4
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  G  Y  Y  L  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13148  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTGGTTATTATTTGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*01  49   ......................................C...A....C..C.G..G.................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  L  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_13148  91   TGGCTTGGTTTGATCTCTTACAGCGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAACAAC  180
V  92.2% (225/244)  IGHV4-59*01  139  ...A....G.AT....A......T.....C........................................................G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  V  T  G  A  G  W  L  P  D  Y  W 
                    Query_13148  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCCTGTATTATTGTGTGACAGGTGCGGGATGGCTACCTGACTACTGG  270
V  92.2% (225/244)  IGHV4-59*01  229  .............................................G.......C....C..G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-12*01  11   ------------------------------------------------------------------------.......-----------  17
J  100.0% (41/41)   IGHJ4*02     8    --------------------------------------------------------------------------------..........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_13148  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (41/41)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_108517

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           352     3e-99
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TACTG	CCGTGCTGTTA	ACTATGATAGTGGTG	ATTCCGGTTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	CGTGCTGTTAACTATGATAGTGGTGATTCCGGTTGGTACTTTGACTAC	RAVNYDSGDSGWYFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	241	113	109	4	0	96.5
Total	N/A	N/A	241	233	8	0	96.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13149  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACTTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  96.7% (233/241)  IGHV3-33*01  47   .....................................C.......G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  E  K  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13149  91   AGTGGGTGGCAGTTATATGGTATGATGGAAGTGAAAAATACTATGCAGACTCCTTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  96.7% (233/241)  IGHV3-33*01  137  ................................A.T..................G....................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  R  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  R  A  V  N  Y  D  S  G  D  
                    Query_13149  181  AGCGCACACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGCCGTGCTGTTAACTATGATAGTGGTGATT  270
V  96.7% (233/241)  IGHV3-33*01  227  ..AA...G.....................................................-----------------------------  287
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y                                
D  93.3% (14/15)    IGHD3-22*01  6    ------------------------------------------------------------------------...........A...---  20

                                      T------------------>                                  
                                      S  G  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13149  271  CCGGTTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (46/46)   IGHJ4*02     3    --------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_138258

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           302     3e-84
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	218	25	0	89.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E  
                    Query_13150  4    CCCTGAGACTCTCCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAGT  93
V  89.7% (218/243)  IGHV4-59*01  50   .....TCC...A................T..........G.AG.T............................A...A............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N  
                    Query_13150  94   GGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAATG  183
V  89.7% (218/243)  IGHV4-59*01  140  ..A....G...........C..T.....C..C..C.......................A..........................G..CC  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y  
                    Query_13150  184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTACT  273
V  89.7% (218/243)  IGHV4-59*01  230  ..............................CT..............G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  94.1% (16/17)    IGHD2-2*01   8    --------------------------------------------------------------------........T........-----  24
J  88.5% (46/52)    IGHJ6*02     11   -------------------------------------------------------------------------------------.....  15

                                      ------------->                                 
                                      Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_13150  274  ACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  320
J  88.5% (46/52)    IGHJ6*02     16   ..GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_138257

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           327     9e-92
IGHD2-8*01                                                                                            23.8    0.011
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTCCC	AGGATTTTGTACTGAAGATGTATG	TAATG	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTCCCAGGATTTTGTACTGAAGATGTATGTAATGACTATGACTTC	ARDFPGFCTEDVCNDYDF	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	22	4	0	84.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	126	24	19	5	0	79.2
FR3-IMGT	127	240	114	112	2	0	98.2
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	247	228	19	0	92.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  S  F  S  A  Y  E  M  N  W  V  R  Q  T  P  G  K  G  L  E  
                    Query_13151  2    CCCTGTCCCTCACCTGTGCAGCCTCTGGATTCAGTTTCAGTGCCTATGAAATGAACTGGGTCCGCCAGACTCCAGGGAAGGGGCTGGAGT  91
V  92.3% (228/247)  IGHV3-48*03  50   .....AGA...T.....................CC......AGT........................G.....................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  I  S  H  I  S  T  G  G  S  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  
                    Query_13151  92   GGATTTCACACATTAGTACTGGTGGTAGTGGCACATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGA  181
V  92.3% (228/247)  IGHV3-48*03  140  ..G.....T.........G.A........AC..T........................................................  229
                                      W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  

                                      3-IMGT----------------------------------------------------><----------------------CDR3-IMG
                                      N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  F  P  G  F  C  T  E  
                    Query_13151  182  ACTCCCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATTTCCCAGGATTTTGTACTGAAG  271
V  92.3% (228/247)  IGHV3-48*03  230  ....A....A.........................................................-----------------------  296
                                      N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  83.3% (20/24)    IGHD2-8*01   1    -------------------------------------------------------------------------.....A.......A.T.  17

                                      T--------------------->                                  
                                      D  V  C  N  D  Y  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13151  272  ATGTATGTAATGACTATGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  83.3% (20/24)    IGHD2-8*01   18   G......--------------------------------------------------  24
J  95.6% (43/45)    IGHJ4*02     4    ------------...T.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_138254

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           297     7e-83
IGHD3-10*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              39.1    5e-07


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	ACGTC	TTACTATGTTTCGGGG	CCACCGACCGAC	CCAGG	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	217	27	0	88.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  K  D  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_13152  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAAGGACTACGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  88.9% (217/244)  IGHV3-23*01  47   ..........................................GCAG...T.......G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  N  D  T  G  L  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13152  91   AATGGGTCTCAAGTATTAATGATACTGGTCTTACTACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  88.9% (217/244)  IGHV3-23*01  137  .G.........GC.....G..G..G....GG..GC.............................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT---------------------------------------------------->                            
                                      K  N  I  V  Y  L  Q  M  N  S  L  R  G  A  D  T  A  I  Y  Y  C  A  R  L  T  M  F  R  G  H  
                    Query_13152  181  AAAACATTGTGTATCTGCAAATGAACAGCCTGAGAGGCGCGGACACGGCCATTTATTATTGTGCACGTCTTACTATGTTTCGGGGCCACC  270
V  88.9% (217/244)  IGHV3-23*01  227  .G....CGC...........................C..A..........G.A.....C.....--------------------------  290
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  93.8% (15/16)    IGHD3-10*01  4    ---------------------------------------------------------------------........G.......-----  19

                                                                          
                                      R  P  T  Q  G  A  L  V  T  V  S  S  
                    Query_13152  271  GACCGACCCAGGGAGCCCTAGTCACCGTCTCTTCAG  306
J  89.7% (26/29)    IGHJ4*02     20   -------.......A....G...........C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_138255

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           375     3e-106
IGHD6-25*01                                                                                           14.1    9.4   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACAGTCACCGGCTTCACTGGT	CGGCTAC	CAA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACAGTCACCGGCTTCACTGGTCGGCTACCAAGACTAC	ARVQSPASLVGYQDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	265	25	0	91.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  N  Y
                    Query_13153  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCGGGAGGCACCTTCAGCAACTA  90
V  91.4% (265/290)  IGHV1-69*01  6    ..................G..........A.......................................T................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  F  M  P  I  F  G  A  A  D  Y  A  Q
                    Query_13153  91   TGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGTTCATGCCTATCTTTGGTGCAGCGGACTACGCCCA  180
V  91.4% (265/290)  IGHV1-69*01  96   ..C.................................G..................A....C............A....AA.......A..  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  A  T  I  T  A  D  E  S  T  G  T  S  Y  M  E  L  R  N  L  K  S  E  D  T  A
                    Query_13153  181  GAAGTTCCAAGACAGAGCCACCATTACCGCGGACGAATCCACGGGCACATCCTATATGGAACTGAGGAACCTGAAATCTGAAGACACGGC  270
V  91.4% (265/290)  IGHV1-69*01  186  .........G.G.....T...G.....................A.....G....C.....G.....C.G.....G......G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  V  Q  S  P  A  S  L  V  G  Y  Q  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13153  271  CGTATATTACTGTGCGAGAGTACAGTCACCGGCTTCACTGGTCGGCTACCAAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  91.4% (265/290)  IGHV1-69*01  276  ...G................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  12   ------------------------------------------.......-----------------------------------------  18
J  100.0% (40/40)   IGHJ4*02     9    ----------------------------------------------------......................................  46

                                        
                                        
                    Query_13153  361  AG  362
J  100.0% (40/40)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_138250

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTCCTTCTACGGTATGGACGTC	ARHGDDSGSYLYSFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  N  Y
                    Query_13154  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACAGCTTTACCAACTA  90
V  93.8% (273/291)  IGHV5-51*01  6    ....................................C........................A........................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  G  W  V  R  Q  R  P  G  E  G  L  E  W  M  G  L  I  Y  P  G  D  S  D  T  R  Y  N  S
                    Query_13154  91   CTTCATCGGCTGGGTGCGCCAGAGGCCCGGGGAAGGCCTGGAGTGGATGGGGCTCATTTATCCTGGTGACTCTGATACCAGGTACAACTC  180
V  93.8% (273/291)  IGHV5-51*01  96   ..GG...................T.......A....................A....C.......................A....G.C.  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  P  D  T  A
                    Query_13154  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCCCGGACACCGC  270
V  93.8% (273/291)  IGHV5-51*01  186  ...............G.............................C...........G......A..............T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  S  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_13154  271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTCCTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  93.8% (273/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  96.5% (55/57)    IGHJ6*02     6    ----------------------------------------------....A..A....................................  49

                                                   
                                        T  V  S  S 
                    Query_13154  361  CACCGTCTCCTCA  373
J  96.5% (55/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_138251

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           355     3e-100
IGHD6-19*01                                                                                           14.1    8.2   
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGTTTCACC	GTGGCTG	ATCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGTTTCACCGTGGCTGATCCTTTTGACTAC	ARGRFTVADPFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  S  T  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13155  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTCAGCACGTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  95.6% (238/249)  IGHV3-64*01  47   ................................T..........T.GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  T  I  S  S  N  G  E  S  T  H  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13155  91   AATATGTTTCAACTATTAGTAGTAATGGGGAGAGCACACATTATGCAAACTCTGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  95.6% (238/249)  IGHV3-64*01  137  ...........G..................GT......T...................................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  G  R  F  T  V  A  D  
                    Query_13155  181  AGAACACGCTGTATCTTCAAATGGGCAGCCTGAGAGGTGAGGACACGGCTGTATATTACTGTGCGAGAGGCCGTTTCACCGTGGCTGATC  270
V  95.6% (238/249)  IGHV3-64*01  227  ....................................C........T......G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD6-19*01  11   --------------------------------------------------------------------------------.......---  17

                                      ---------->                                  
                                      P  F  D  Y  W  G  Q  G  T  L  V  N  V  S  S  
                    Query_13155  271  CTTTTGACTACTGGGGCCAGGGAACCCTGGTCAACGTCTCCTCAG  315
J  97.7% (42/43)    IGHJ4*02     6    --...............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_140008

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCAC	ARAPPFDYDLDVRGIHNFDH	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_13156  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  94.7% (230/243)  IGHV4-59*01  50   .....TCC...A....C.........................G...............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S  
                    Query_13156  94   GGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAGCC  183
V  94.7% (230/243)  IGHV4-59*01  140  .........A.................G.............................................A.............A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D  
                    Query_13156  184  AGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGACG  273
V  94.7% (230/243)  IGHV4-59*01  230  .................AG...........................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD3-22*01  6    ---------------------------------------------------------------------------........-------  13

                                      T------------------------>                                  
                                      V  R  G  I  H  N  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13156  274  TAAGGGGAATCCACAACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
J  97.8% (44/45)    IGHJ4*02     4    ---------------........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_140009

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           343     2e-96
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GATGG	GGTTCGAGGA	CACTCGACCGT	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGGTTCGAGGACACTCGACCGTTTTTGATATC	ARDGVRGHSTVFDI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	231	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  N  S  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13157  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTAACTCTTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.1% (231/243)  IGHV4-59*08  49   ........................................G....T...AC.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  M  D  T  S  K  N 
                    Query_13157  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTATAATCCCTCCCTTAAGAGTCGAGTCACCATATCAATGGACACGTCCAAGAAC  180
V  95.1% (231/243)  IGHV4-59*08  139  ......................................C..C........C.....................G.A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  V  R  G  H  S  T  V 
                    Query_13157  181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCAGACACGGCCGTGTATTATTGTGCGAGAGATGGGGTTCGAGGACACTCGACCGTT  270
V  95.1% (231/243)  IGHV4-59*08  229  ....................C........C.......................C.........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD3-10*01  11   --------------------------------------------------------------------......G...------------  20
J  90.9% (40/44)    IGHJ3*02     7    -----------------------------------------------------------------------------------------.  7

                                      -------->                                  
                                       F  D  I  W  G  Q  G  T  T  I  V  V  S  S  
                    Query_13157  271  TTTGATATCTGGGGCCAAGGGACAACGATCGTCGTCTCTTCAG  313
J  90.9% (40/44)    IGHJ3*02     8    .........................T.G..AC...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_170951

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD5-12*01                                                                                           14.1    8.5   
IGHJ5*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCACCACTATGCCTATGCCGGCGGG	GGATATGGTG	AAT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCACCACTATGCCTATGCCGGCGGGGGATATGGTGAATCC	ARGHHYAYAGGGYGES	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  T  W  I  R  Q  H  P  G  Q  A 
                    Query_13158  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGACCTGGATCCGCCAGCACCCAGGGCAGGCC  90
V  96.4% (241/250)  IGHV4-31*03  49   .............................................................G......................A...G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       P  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  G  R  V  I  I  S  V  D  T  S 
                    Query_13158  91   CCGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGGGTCGAGTCATCATATCAGTAGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  .T..........................................................A.......T.C...................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  H  Y  A  Y  A 
                    Query_13158  181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGGTCACCACTATGCCTATGCC  270
V  96.4% (241/250)  IGHV4-31*03  229  ..........................C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      GT------------------>                                  
                                       G  G  G  Y  G  E  S  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_13158  271  GGCGGGGGATATGGTGAATCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  325
D  90.0% (9/10)     IGHD5-12*01  3    ------......A...---------------------------------------  12
J  97.2% (35/36)    IGHJ5*02     16   -------------------..................T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_140000

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           353     1e-99
IGHD6-6*01                                                                                            16.1    2.3  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	T	GAGTTTAGCACCTC	CGCGGAGTATGCGCGCCG	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTGAGTTTAGCACCTCCGCGGAGTATGCGCGCCGATTACTACAATAACTACGCTATGGACGTC	ARVSLAPPRSMRADYYNNYAMDV	238	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	235	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13159  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAAGGACTGGAG  90
V  96.3% (235/244)  IGHV4-59*01  49   ................................................................................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S 
                    Query_13159  91   TGGATTGGGTATATTAATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAGC  180
V  96.3% (235/244)  IGHV4-59*01  139  ..............CT........................................................................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  V  S  L  A  P  P  R  S  M 
                    Query_13159  181  CAGTTCTCCCTGAAGTTGAACTCTGTGACCGCTGCGGACACGGCCGTATATTTCTGTGCGCGAGTGAGTTTAGCACCTCCGCGGAGTATG  270
V  96.3% (235/244)  IGHV4-59*01  229  ...............C...G...........................G....A.......A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  85.7% (12/14)    IGHD6-6*01   1    -----------------------------------------------------------------....A.....G...-----------  14

                                      3-IMGT----------------------------->                                 
                                       R  A  D  Y  Y  N  N  Y  A  M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_13159  271  CGCGCCGATTACTACAATAACTACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  339
J  91.9% (57/62)    IGHJ6*02     1    -------........T.CT......G................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_140001

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           333     1e-93
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCGAAGTGTTTCC	ATGGTTCGGGGAGT	CGACAGAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCGAAGTGTTTCCATGGTTCGGGGAGTCGACAGAATTGACTAC	ARGRSVSMVRGVDRIDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  S  F  N  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13160  1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCAGCTTCAATACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.8% (231/249)  IGHV3-30*03  47   ........................C...........C.....G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  M  A  V  I  S  F  D  G  S  R  Q  Y  Y  A  D  S  M  E  G  R  L  T  I  S  R  D  N  S  
                    Query_13160  91   AGTGGATGGCAGTAATATCATTTGATGGAAGTAGACAATACTATGCAGACTCCATGGAGGGCCGATTAACCATCTCCAGAGACAATTCCA  180
V  92.8% (231/249)  IGHV3-30*03  137  .....G.......T.......A...........ATA.................G..A..........C......................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  S  T  V  Y  L  Q  M  S  S  L  R  T  E  D  T  A  V  Y  Y  C  A  R  G  R  S  V  S  M  V  
                    Query_13160  181  AGAGCACGGTGTATCTGCAAATGAGCAGCCTGAGAACTGAGGATACGGCTGTGTATTACTGTGCGAGAGGGCGAAGTGTTTCCATGGTTC  270
V  92.8% (231/249)  IGHV3-30*03  227  ...A....C...............A..........G.......C.........................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD3-10*01  9    -----------------------------------------------------------------------------------.......  15

                                      GT-------------------->                                  
                                      R  G  V  D  R  I  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_13160  271  GGGGAGTCGACAGAATTGACTACTGGGGCCAGGGAATACTGGTCACCGTCTCCTCAG  327
D  100.0% (14/14)   IGHD3-10*01  16   .......--------------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    ---------------.....................CC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_140002

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           416     2e-118
IGHD2-2*01                                                                                            10.3    134   
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCAAGGC	ACCAG	TTCCCTCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCAAGGCACCAGTTCCCTCTTACTTTGACTAC	ARDPKAPVPSYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	278	12	0	95.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  F  T  Y 
                    Query_13161  2    CAGCTGGTGCAGTCTGGAGCCGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCCGGTTACACCTTTTTCACCTAC  91
V  95.9% (278/290)  IGHV1-18*04  7    ....................T...............................................T............AC..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  S  N  Y  A  Q 
                    Query_13161  92   GGCATCCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCTTACAATGGTAACTCAAACTATGCACAG  181
V  95.9% (278/290)  IGHV1-18*04  97   ..T...AG...................................................................A..............  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  Y  D  D  T  A 
                    Query_13161  182  AAACTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTCAGATATGACGACACGGCC  271
V  95.9% (278/290)  IGHV1-18*04  187  ..G....................................................................G....C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  D  P  K  A  P  V  P  S  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13161  272  GTGTATTACTGTGCGAGAGATCCCAAGGCACCAGTTCCCTCTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  95.9% (278/290)  IGHV1-18*04  277  ....................--------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (5/5)     IGHD2-2*01   17   -----------------------------.....------------------------------------------------------  21
J  100.0% (46/46)   IGHJ4*02     3    ------------------------------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_140003

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           344     6e-97
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGGGGA	AGCAGTGGCTGGTAC	TGGAGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATGGGGGAAGCAGTGGCTGGTACTGGAGTTTTGACTAT	VKDGGSSGWYWSFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  I  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13162  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATATTTATGGCATCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-30*18  47   ..........................................G..GC........G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  V  S  Y  D  G  G  N  K  Y  Y  T  D  S  V  R  G  R  F  S  I  S  R  D  N  S  
                    Query_13162  91   AGTGGGTGGCATTTGTTTCATATGATGGAGGTAATAAATACTATACAGACTCCGTGAGGGGCCGATTCTCCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-30*18  137  ...........G..A.A............A..............G............A..........A.....................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  F  M  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  K  D  G  G  S  S  G  W  
                    Query_13162  181  AGAACACGCTGTTTATGCAAATGAACAGCCTGAGAGCTGACGACACGGCTGTGTATTACTGTGTGAAAGATGGGGGAAGCAGTGGCTGGT  270
V  94.0% (235/250)  IGHV3-30*18  227  ............A.C.........................G......................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD6-19*01  7    -----------------------------------------------------------------------------.............  19

                                      ---------------->                                  
                                      Y  W  S  F  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_13162  271  ACTGGAGTTTTGACTATTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (15/15)   IGHD6-19*01  20   ..-------------------------------------------------  21
J  95.3% (41/43)    IGHJ4*02     6    --------........C.......A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_184206

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           322     2e-90
IGHD1-26*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGC	ATAGTGGGAGCTACT	TGT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGCATAGTGGGAGCTACTTGTACTTCTTTGACTAC	ARLHSGSYLYFFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  T  S  G  F  T  V  I  N  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13163  1    GGTCCCTGAGACTCTCCTGTTCGACCTCTGGATTCACCGTCATTAATAATTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.2% (225/244)  IGHV3-53*01  47   ....................G.AG.......G..........G..GC..C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  Y  T  N  G  R  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_13163  91   AGTGGGTCTCAGCCATTTATACCAATGGTCGCACATTCTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGA  180
V  92.2% (225/244)  IGHV3-53*01  137  ............TT.......G.GG....A......A........................A............................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  E  M  N  S  L  R  A  A  D  T  A  V  Y  Y  C  A  R  L  H  S  G  S  Y  L  Y  
                    Query_13163  181  ACACGCTGTATCTTGAAATGAACAGCCTGAGAGCCGCGGACACGGCCGTGTATTATTGTGCGAGGCTGCATAGTGGGAGCTACTTGTACT  270
V  92.2% (225/244)  IGHV3-53*01  227  ..............C.....................A..................C........--------------------------  290
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  100.0% (15/15)   IGHD1-26*01  4    ---------------------------------------------------------------------...............------  18
J  93.8% (45/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      F  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_13163  271  TCTTTGACTACTGGGGCCAGGGGGCCCTGGTCACCGTCTCCTCAG  315
J  93.8% (45/48)    IGHJ4*02     4    A.....................AA.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_140005

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_13164  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_13164  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_13164  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_13164  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_184204

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           324     8e-91
IGHD3-10*01                                                                                           12.2    35   
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTAAATTGGGAATCCGGGGG	GGTGCGGGG	GTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTAAATTGGGAATCCGGGGGGGTGCGGGGGTTTTTGACCAC	ATKLGIRGGAGVFDH	275	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	85	24	8	7	9	33.3
FR2-IMGT	86	136	51	48	3	0	94.1
CDR2-IMGT	137	160	24	19	5	0	79.2
FR3-IMGT	161	274	114	106	8	0	93
CDR3-IMGT (germline)	275	278	4	4	0	0	100
Total	N/A	N/A	287	249	29	9	86.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  Q  P  G  S  S  V  K  V  S  C  K  A  S  S           T  S  Y
                    Query_13165  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGCAGCCTGGGTCCTCGGTGAAGGTTTCCTGCAAGGCCAGTAGT---------ACCAGTTA  81
V  86.8% (249/287)  IGHV1-69*01  6    ..................G............A......................C...........TTC.G.AGGCACCTTC.G...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  S  W  V  R  L  A  P  G  Q  G  L  E  W  M  G  G  I  T  P  M  F  G  T  T  N  Y  A  Q
                    Query_13165  82   TTTCATCAGCTGGGTGCGACTGGCCCCTGGACAAGGCCTTGAGTGGATGGGAGGCATCACCCCTATGTTTGGAACAACTAACTACGCACA  171
V  86.8% (249/287)  IGHV1-69*01  96   .GCT................A...............G.................G....T......C.....T...G.A...........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  A  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  G  D  T  A
                    Query_13165  172  GAAGTTTCAGGGCAGAGTCGCGATTACCGCGGACGAATCTACGAGCACCGCCTACATGGAGTTGAGCAGCCTGAGATCTGGGGACACGGC  261
V  86.8% (249/287)  IGHV1-69*01  186  ......C............A...................C........A............C..................A.........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  T  K  L  G  I  R  G  G  A  G  V  F  D  H  W  G  Q  G  T  P  V  T  V  S  A
                    Query_13165  262  CGTATATTATTGTGCGACTAAATTGGGAATCCGGGGGGGTGCGGGGGTTTTTGACCACTGGGGCCAGGGAACCCCAGTCACCGTCTCCGC  351
V  86.8% (249/287)  IGHV1-69*01  276  ...G.....C.......-------------------------------------------------------------------------  292
                                        V  Y  Y  C  A                                                                           
D  88.9% (8/9)      IGHD3-10*01  11   -------------------------------------...T.....--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    -------------------------------------------------......T..................TG............T.  46

                                        
                                        
                    Query_13165  352  AG  353
J  90.7% (39/43)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_184205

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           321     6e-90
IGHD3-3*01                                                                                            12.2    31   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAGTGG	CAAGTAGGG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGAGTGGCAAGTAGGGGGTTCGACCCC	VRGVASRGFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  F  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13166  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCAGCTACTTTATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGACTCG  90
V  91.2% (227/249)  IGHV3-74*01  47   ...........................................T.......GG................................G..G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  A  R  I  R  S  D  G  T  T  T  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  V  
                    Query_13166  91   TGTGGGTCGCACGTATTCGGAGTGATGGGACTACCACAGCCTACGCGGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAACGTCA  180
V  91.2% (227/249)  IGHV3-74*01  137  ........T........AAT..........G..G....AG........................A......................C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  S  T  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  V  R  G  V  A  S  R  G  F  
                    Query_13166  181  AGAGCACACTGTATCTGGAAATGAACAGTCTGAGAGTCGAGGACACGGCTGTGTATTATTGTGTGAGAGGAGTGGCAAGTAGGGGGTTCG  270
V  91.2% (227/249)  IGHV3-74*01  227  ...A...G.........C..................C.....................C....CA....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-3*01   16   ---------------------------------------------------------------------......---------------  21
J  97.8% (44/45)    IGHJ5*02     7    ------------------------------------------------------------------------------------......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_13166  271  ACCCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  309
J  97.8% (44/45)    IGHJ5*02     13   ..........................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_13756

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           350     8e-99
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	C	GGGACTTATGC	CAACTCGCCA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGACTTATGCCAACTCGCCATACTGGTACTTCGATCTC	ASGTYANSPYWYFDL	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_13167  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCGGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.2% (236/248)  IGHV4-39*02  49   ...................C...........G.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  T  G  S  A  Y  H  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_13167  91   CTGGAGTGGATTGCGAGTATCTATTATACTGGGAGCGCCTACCACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  95.2% (236/248)  IGHV4-39*02  139  .............G..............G.......A.....T...............................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       N  N  H  F  S  L  Q  L  S  S  V  T  D  A  D  T  A  V  Y  Y  C  A  S  G  T  Y  A  N  S  P 
                    Query_13167  181  AACAACCACTTCTCCCTGCAGCTGAGCTCTGTGACCGACGCAGACACGGCTGTCTATTACTGTGCGAGCGGGACTTATGCCAACTCGCCA  270
V  95.2% (236/248)  IGHV4-39*02  229  ..G...............A..................C...............G..............----------------------  296
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.9% (10/11)    IGHD3-16*01  20   ---------------------------------------------------------------------....G......----------  30

                                      ----------------->                                  
                                       Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_13167  271  TACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  322
J  100.0% (52/52)   IGHJ2*01     2    ....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_13757

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           349     2e-98
IGHD1-1*01                                                                                            10.3    120  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	CAACT	CACGGCCGCCTT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCAACTCACGGCCGCCTTACTTCTTTGACTAC	ARGGNSRPPYFFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  V  S  G  F  T  F  R  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13168  1    GGTCCCTGAGACTCTCCTGTGTAGTCTCTGGATTCACCTTTAGGACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-21*01  47   .....................C..C...............C..T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  G  S  S  T  S  L  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13168  91   AGTGGGTCTCATCCATTGGTAGTAGTACTAGTCTCATATACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (236/249)  IGHV3-21*01  137  .................A.........G....TA............A...........................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  A  R  G  G  N  S  R  P  P  
                    Query_13168  181  AGAACTCAGTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCTGTGTATTACTGTGCGAGAGGGGGCAACTCACGGCCGCCTT  270
V  94.8% (236/249)  IGHV3-21*01  227  ........C...........................C...G............................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-1*01   5    -------------------------------------------------------------------------.....------------  9

                                      ------------->                                  
                                      Y  F  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_13168  271  ACTTCTTTGACTACTGGGGCCAGGGAAGTCTGGTCACCGTCTCCTCAG  318
J  93.8% (45/48)    IGHJ4*02     1    ...A.......................CC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_310438

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           413     2e-117
IGHD1-26*01                                                                                           10.3    139   
IGHJ5*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	GGAGC	ACATCAATGCCTCGGACGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGATCGGAGCACATCAATGCCTCGGACGGACTGGTGCGACACC	GRDRSTSMPRTDWCDT	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	75	69	69	0	0	100
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	110	4	0	96.5
CDR3-IMGT (germline)	289	296	8	7	1	0	87.5
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_13169  7    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACGTTTACCAGTTAT  96
V  95.5% (277/290)  IGHV1-18*01  7    .............................................................................C........C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  W  V  S  T  Y  N  G  D  T  N  Y  A  Q 
                    Query_13169  97   GGTATCAGCTGGGTGCGCCAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGGTGGGTCAGCACTTACAATGGTGACACAAACTATGCACAG  186
V  95.5% (277/290)  IGHV1-18*01  97   .................A...........................A....A...A.....G...........A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  E  V  R  S  L  R  S  D  D  T  A 
                    Query_13169  187  AAGTTCCAGGGCAGAGTCACCCTGACCACAGACACATCCACGAGCACAGCCTACATGGAGGTGAGGAGCCTGAGATCTGACGACACGGCC  276
V  95.5% (277/290)  IGHV1-18*01  187  ...C.................A......................................C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  G  R  D  R  S  T  S  M  P  R  T  D  W  C  D  T  W  G  E  G  T  L  V  T  V  S 
                    Query_13169  277  GTGTATTATTGTGGGAGAGATCGGAGCACATCAATGCCTCGGACGGACTGGTGCGACACCTGGGGCGAGGGAACCCTGGTCACCGTCTCC  366
V  95.5% (277/290)  IGHV1-18*01  277  ........C....C......----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (5/5)     IGHD1-26*01  10   ----------------------.....---------------------------------------------------------------  14
J  93.6% (44/47)    IGHJ5*02     4    ----------------------------------------------......T....C........C.......................  47

                                         
                                       S 
                    Query_13169  367  TCA  369
J  93.6% (44/47)    IGHJ5*02     48   ...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_310439

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           382     3e-108
IGHD2-21*02                                                                                           10.3    122   
IGHJ6*02                                                                                              114     2e-29 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAAAA	GTGAC	CCGCAAAC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAAAAGTGACCCGCAAACACTACTACTACTACGGTATGGACGTC	ATKVTRKHYYYYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	245	1	0	99.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13170  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.6% (245/246)  IGHV3-23*01  47   ..........................................................C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13170  91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  99.6% (245/246)  IGHV3-23*01  137  ..........................................................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  K  V  T  R  K  H  Y  
                    Query_13170  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGACAAAAGTGACCCGCAAACACTACT  270
V  99.6% (245/246)  IGHV3-23*01  227  ..................................................................------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*02  15   -----------------------------------------------------------------------.....--------------  19
J  100.0% (59/59)   IGHJ6*02     4    ------------------------------------------------------------------------------------......  9

                                      T------------------>                                 
                                      Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13170  271  ACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  100.0% (59/59)   IGHJ6*02     10   .....................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_13752

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_13171  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAGT  93
V  93.9% (229/244)  IGHV4-59*01  50   .....TCC...A..................G........G....................................G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_13171  94   GGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  93.9% (229/244)  IGHV4-59*01  140  .......GT........T.......G................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G  
                    Query_13171  184  AGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGAC  273
V  93.9% (229/244)  IGHV4-59*01  230  ............A.....G.....................G.C.....................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  94.7% (18/19)    IGHD3-16*01  7    ----------------------------------------------------------------....T..............-------  25

                                      ->                                  
                                      H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13171  274  ACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  309
J  97.2% (35/36)    IGHJ4*02     13   ................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_13753

Length=491
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           335     6e-94
IGHD2-21*01                                                                                           16.1    3.2  
IGHJ4*02                                                                                              16.1    6.9  


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-21*01	IGHJ4*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GGGGGGGGTGGGGGTTTT	TATTGTGG	N/A	GGGAA	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_13172  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.9% (229/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  N  R  V  T  I  S  V  D  T  S 
                    Query_13172  91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAATCGAGTCACCATTTCCGTAGACACGTCC  180
V  93.9% (229/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C....G............A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT---------------------------------------------------->                           
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  W  G  F  L  L  W 
                    Query_13172  181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGGTGGGGGTTTTTATTGTGG  270
V  93.9% (229/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (8/8)     IGHD2-21*01  5    ----------------------------------------------------------------------------------........  12

                                              
                                       G  N  P
                    Query_13172  271  GGGAACCC  278
J  100.0% (8/8)     IGHJ4*02     23   ........  30


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 48703896


Query= Query_13750

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           321     7e-90
IGHD3-10*01                                                                                           18.0    0.58 
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	TTCTCTTGGCCATTTT	TATGGTTCG	AGTA	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTCTCTTGGCCATTTTTATGGTTCGAGTACTTTTGATATG	ARGSLGHFYGSSTFDM	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  G  A  S  F  S  D  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13173  1    ACCCTGTCCCTCACCTGCACTGTCTATGGTGCGTCCTTCAGTGATTACTTCTGGAACTGGATCCGCCAGCCCCCGGGGAAGGGGCTGGAG  90
V  91.8% (225/245)  IGHV4-34*01  49   ..................G............G...........G.....A.....G..................A...............  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  G  T  N  Y  N  P  S  L  M  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_13173  91   TGGATTGGGGAGATCAATCATAGTGGAGGTACCAACTACAACCCGTCCCTGATGAGTCGAGTCACCATATCAATTGACACGTCTAAGAAC  180
V  91.8% (225/245)  IGHV4-34*01  139  ...........A...............A.C....................C.A...................G.A........C......  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  V  K  L  K  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  G  S  L  G  H  F  Y  G  S 
                    Query_13173  181  CAGTTCTCCGTGAAGTTGAAGTCTGTGGCCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAGGTTCTCTTGGCCATTTTTATGGTTCG  270
V  91.8% (225/245)  IGHV4-34*01  229  .........C.....C...GC......A...................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (9/9)     IGHD3-10*01  8    ---------------------------------------------------------------------------------.........  16

                                      -------------->                                  
                                       S  T  F  D  M  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13173  271  AGTACTTTTGATATGTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  319
J  95.6% (43/45)    IGHJ3*02     6    ----..........C...............A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_13751

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         341     5e-96
IGHD5-12*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD5-12*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	CGGTAAAGA	TGGCGACAATTAC	TTTTCCTCATTG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGACGGTAAAGATGGCGACAATTACTTTTCCTCATTGGACTCC	ATDGKDGDNYFSSLDS	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  V  A  S  G  I  T  F  S  T  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13174    1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGAATCACCTTCAGTACCTATTCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-30-3*01  47   .....................C..........T............G....G.......................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        V  W  V  A  D  I  S  F  D  G  G  K  K  H  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13174    91   TGTGGGTGGCAGATATATCATTTGATGGAGGCAAGAAGCACTTCGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-30-3*01  137  A...........T........A.......A....T..AT...A...............................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                        K  N  T  L  *  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  T  D  G  K  D  G  D  N  
                    Query_13174    181  AGAACACGCTGTAACTGCAAATGAACAGCCTGAGAGTTGAGGACACGGCTGTTTATTACTGTGCGACAGACGGTAAAGATGGCGACAATT  270
V  93.6% (234/250)  IGHV3-30-3*01  227  .............T......................C...............G.............G...--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.6% (11/13)    IGHD5-12*01    11   -------------------------------------------------------------------------------....T..G...  21

                                        T------------------>                                  
                                        Y  F  S  S  L  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13174    271  ACTTTTCCTCATTGGACTCCTGGGGCCAGGGAACCCTGGTCACAGTCTCCTCAG  324
D  84.6% (11/13)    IGHD5-12*01    22   ..----------------------------------------------------  23
J  95.0% (38/40)    IGHJ4*02       9    --------------....A........................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_41292

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCGGCCGG	TTGTGGTAGTACCGGCTGCTATG	GAAAT	AACCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCGGCCGGTTGTGGTAGTACCGGCTGCTATGGAAATAACCGGTTCGACCCC	AREAAGCGSTGCYGNNRFDP	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_13175  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGCGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*01  49   .............................................T...................................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  D  H  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13175  91   TGGATTGGGTATATCCATTACAGTGGGAGCACCGACCACAACCCCTCCCTCAAGAGTCGAGTCACCATTTCAGTTGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*01  139  ...............T.................A..T...............................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  I  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  A  G  C  G  S  T  G 
                    Query_13175  181  CAGATCTCCCTGAAGGTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGAAGCGGCCGGTTGTGGTAGTACCGGC  270
V  95.1% (233/245)  IGHV4-59*01  229  ...T...........C...G...........................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.3% (21/23)    IGHD2-2*01   7    --------------------------------------------------------------------------....A........A..  22

                                      GT------------------------>                                  
                                       C  Y  G  N  N  R  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13175  271  TGCTATGGAAATAACCGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  91.3% (21/23)    IGHD2-2*01   23   .......------------------------------------------------------  29
J  98.0% (48/49)    IGHJ5*02     3    ------------...T.............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_310433

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           260     1e-71
IGHD4-17*01                                                                                           21.8    0.040
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD4-17*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CATCT	ACTGCGGTGACTAC	TGA	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACATCTACTGCGGTGACTACTGATTTTGATGTC	ATSTAVTTDFDV	246	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	22	8	0	73.3
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	13	8	0	61.9
FR3-IMGT	132	245	114	98	16	0	86
CDR3-IMGT (germline)	246	249	4	4	0	0	100
Total	N/A	N/A	246	206	40	0	83.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  N  V  S  N  G  S  L  R  R  S  S  Y  Y  W  G  W  V  R  Q  P  P  G  Q  G  
                    Query_13176  4    CCCTGAGACTCTCCTGCAATGTGTCTAATGGCTCCCTCCGCAGAAGTTCTTACTATTGGGGCTGGGTCCGCCAGCCCCCAGGGCAGGGGC  93
V  83.7% (206/246)  IGHV4-39*01  50   .....TCC...A......C...C...GG.......A..A....T...AG......C.........A.................A......  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  R  Y  F  S  G  A  Y  Y  Y  S  P  S  L  K  S  R  V  T  I  S  A  D  T  S  
                    Query_13176  94   TGGAGTGGATTGGGAGTCGTTATTTTAGTGGGGCCTACTACTACAGTCCGTCCCTCAAGAGCCGAGTCACCATATCCGCAGACACGTCGA  183
V  83.7% (206/246)  IGHV4-39*01  140  .................ATC....A.......AG.AC........AC..............T................T.........C.  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  H  F  T  L  T  L  T  S  L  T  A  A  D  T  A  I  Y  Y  C  A  T  S  T  A  V  T  T  D  
                    Query_13176  184  AAAATCATTTCACCCTGACGTTGACGTCTCTGACCGCCGCAGACACGGCTATTTATTACTGTGCGACATCTACTGCGGTGACTACTGATT  273
V  83.7% (206/246)  IGHV4-39*01  230  .G..C..G...T......A.C...GC...G....................G.G.............------------------------  295
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD4-17*01  3    -----------------------------------------------------------------------...A..........-----  16
J  97.7% (43/44)    IGHJ3*01     7    ----------------------------------------------------------------------------------------..  8

                                      ------->                                  
                                      F  D  V  W  G  R  G  T  M  V  T  V  S  S  
                    Query_13176  274  TTGATGTCTGGGGCCGAGGGACAATGGTCACCGTCTCTTCAG  315
J  97.7% (43/44)    IGHJ3*01     9    ...............A..........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_310430

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           315     5e-88
IGHD3-22*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATTTCCCCCTTGGG	GTGGTATTTACTA	N/A	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATTTCCCCCTTGGGGTGGTATTTACTAGACTCC	ARISPLGWYLLDS	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	125	24	18	6	0	75
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	231	216	15	0	93.5


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  S  L  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  L  S  Y  I 
                    Query_13177  15   TGTGCAGCCTCTGGATTCAGCCTCAGTAGTTATGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGCTTTCATATATT  104
V  93.5% (216/231)  IGHV3-48*03  64   ...................C.T...................C....................................G.......C...  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  T  G  G  N  K  Y  Y  S  D  S  V  K  G  R  F  T  V  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_13177  105  AGTAGTACGGGTGGTAATAAATACTACTCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCAAGAACTCACTGTATCTG  194
V  93.5% (216/231)  IGHV3-48*03  154  .......GT...A...CC.T.......G..........................A...................................  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><--------------CDR3-IMGT-------------->      
                                       Q  M  S  S  L  R  D  E  D  T  A  V  Y  Y  C  A  R  I  S  P  L  G  W  Y  L  L  D  S  W  G 
                    Query_13177  195  CAAATGAGCAGCCTGAGAGACGAGGACACGGCTGTTTATTACTGTGCGAGAATTTCCCCCTTGGGGTGGTATTTACTAGACTCCTGGGGC  284
V  93.5% (216/231)  IGHV3-48*03  244  .......A...........C...............................---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  84.6% (11/13)    IGHD3-22*01  18   -----------------------------------------------------------------.....TA......------------  30
J  95.0% (38/40)    IGHJ4*02     9    ------------------------------------------------------------------------------....A.......  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_13177  285  CAGGGAACCCTAGTCACCGTCTCCTCAG  312
J  95.0% (38/40)    IGHJ4*02     21   ...........G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_310436

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         433     1e-123
IGHD3-16*01                                                                                           16.1    2.4   
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTTT	TTTGGGGG	G	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTTTTTTGGGGGGCGGTTTGGACGTC	ARLFLGGGLDV	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	283	6	0	97.9


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  G  F  T  S  Y
                    Query_13178    1    GCAGCTGGTGCAGTCTGGAGCAGAGCTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACGGCTTTACCAGCTA  90
V  97.9% (283/289)  IGHV5-10-1*01  6    .........................G..................................................A.............  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P
                    Query_13178    91   CTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAACTACAGCCC  180
V  97.9% (283/289)  IGHV5-10-1*01  96   ........G.................................................................................  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  T  A
                    Query_13178    181  GTCCTTCCAGGGCCACGTCACCATCTCAGCTGACAAGTCCATCAGCACTGCCTACCTGCAGTGGAGGAGTCTGAAGGCCTCGGACACCGC  270
V  97.9% (283/289)  IGHV5-10-1*01  186  .........A........................................................C..C....................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------CDR3-IMGT----------->                                 
                                          M  Y  Y  C  A  R  L  F  L  G  G  G  L  D  V  W  G  Q  G  T  A  V  T  V  S  S 
                    Query_13178    271  CATGTATTACTGTGCGAGACTTTTTTTGGGGGGCGGTTTGGACGTCTGGGGCCAAGGGACCGCGGTCACCGTCTCCTCA  349
V  97.9% (283/289)  IGHV5-10-1*01  276  ...................------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                             
D  100.0% (8/8)     IGHD3-16*01    15   ------------------------........-----------------------------------------------  22
J  95.7% (44/46)    IGHJ6*02       17   ---------------------------------....A.......................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_310434

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         357     1e-100
IGHD3-10*01                                                                                           12.2    32    
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ATGTACGTACATAAA	GGGGAG	GC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAATGTACGTACATAAAGGGGAGGCTATGGACGTC	ARMYVHKGEAMDV	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	51	0	0	100
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	113	1	0	99.1
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_13179    4    CCCTGAGACTCTCCTGTGCTGTCTCTGGTGGCTCCATCAGTAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  96.0% (238/248)  IGHV4-30-4*01  50   .....TCC...A....CA......................C.......A.........................................  139
                                           L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_13179    94   TGGAGTGGATTGGGTACATCTACTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCCA  183
V  96.0% (238/248)  IGHV4-30-4*01  140  ......................T...................................................................  229
                                        L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                        -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                        K  N  Q  F  S  L  K  L  S  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  M  Y  V  H  K  G  E  
                    Query_13179    184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGGCTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAATGTACGTACATAAAGGGGAGG  273
V  96.0% (238/248)  IGHV4-30-4*01  230  ................................A...................................----------------------  297
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01    16   -----------------------------------------------------------------------------------......-  21

                                        ---------->                                 
                                        A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13179    274  CTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  100.0% (43/43)   IGHJ6*02       20   -...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_13759

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           288     5e-80
IGHD3-3*01                                                                                            29.5    2e-04
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTGATACAGTCTTT	CGATTTTTGGAGTGG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTGATACAGTCTTTCGATTTTTGGAGTGGCTACTTCGACTAC	AKDLIQSFDFWSGYFDY	230	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	19	5	0	79.2
FR3-IMGT	116	229	114	103	11	0	90.4
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	224	204	20	0	91.1


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  Y  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D 
                    Query_13180  14   TCTGGATTCACGTTCAGTTACTATGGCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATTTCATATGAT  103
V  91.1% (204/224)  IGHV3-30*18  73   ...........C......AG.........G..................................................A.........  162
                                       S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S  Y  D 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  V  N  D  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  D  K  N  K  V  F  L  Q  M  N 
                    Query_13180  104  GGAGTTAATGACCACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATGACAAGAACAAGGTGTTTCTGCAAATGAAC  193
V  91.1% (204/224)  IGHV3-30*18  163  ...AG....A.AT...............................................TC........C.C...A.............  252
                                       G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><--------------------CDR3-IMGT-------------------->   
                                       S  L  R  V  E  D  T  A  T  Y  Y  C  A  K  D  L  I  Q  S  F  D  F  W  S  G  Y  F  D  Y  W 
                    Query_13180  194  AGCCTGAGAGTTGAGGACACAGCTACTTATTACTGTGCGAAAGATCTGATACAGTCTTTCGATTTTTGGAGTGGCTACTTCGACTACTGG  283
V  91.1% (204/224)  IGHV3-30*18  253  ..........C.........G...GTG.................----------------------------------------------  296
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  100.0% (15/15)   IGHD3-3*01   7    -----------------------------------------------------------...............----------------  21
J  95.7% (45/47)    IGHJ4*02     2    --------------------------------------------------------------------------......T.........  17

                                                                     
                                       G  R  G  T  L  V  T  V  S  S  
                    Query_13180  284  GGCCGGGGAACCCTGGTCACCGTCTCCTCAG  314
J  95.7% (45/47)    IGHJ4*02     18   ....A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_60703

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-3*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TG	ACGATTTTTGGAGTGG	CCCCGTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACGATTTTTGGAGTGGCCCCGTCCTACTTTGACTCC	ARVTIFGVAPSYFDS	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  H  T  R  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13181  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCACACTCGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*01  49   ....................................AT..G.A..........................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13181  91   TGGATTGGGTATATCCATTACAGTGGGAGCACCAATTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAT  180
V  95.9% (234/244)  IGHV4-59*01  139  ...............T...................C.....C...............................................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  T  I  F  G  V  A  P  S 
                    Query_13181  181  CAGTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTGACGATTTTTGGAGTGGCCCCGTCC  270
V  95.9% (234/244)  IGHV4-59*01  229  ...............C................................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (16/16)   IGHD3-3*01   6    ------------------------------------------------------------------................--------  21
J  95.7% (45/47)    IGHJ4*02     2    -----------------------------------------------------------------------------------------.  2

                                      ----------->                                  
                                       Y  F  D  S  W  A  Q  G  T  L  V  T  V  S  S  
                    Query_13181  271  TACTTTGACTCCTGGGCCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  95.7% (45/47)    IGHJ4*02     3    ..........A.....G.............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_12807

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD6-25*01                                                                                           14.1    9.4   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTC	ARQSSAGRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  S  S  G  Y  D  F  L  D  Y
                    Query_13182  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGAGTTCTGGATACGACTTTCTCGACTA  90
V  94.8% (276/291)  IGHV5-51*01  6    ..............................A.....C...........................G...........AG....AC.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_13182  91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCAGGTGACTCTGATACCACATACAGCCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ........G......................................................T................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13182  181  GTCATTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGAACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  ...C.........................................C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        K  Y  Y  C  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  M  V  T  V  S  S
                    Query_13182  271  CAAGTATTACTGTGCGAGACAAAGCAGCGCTGGCAGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCATGGTCACCGTCTCCTC  360
V  94.8% (276/291)  IGHV5-51*01  276  ..T..................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------...............................C...............  61

                                       
                                       
                    Query_13182  361  A  361
J  97.9% (47/48)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_12806

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           358     4e-101
IGHD2-2*01                                                                                            19.9    0.16  
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTTACAAG	GTAGTAGTATCAG	GA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTTACAAGGTAGTAGTATCAGGAACAACTGGTTCGACCCC	ARGLQGSSIRNNWFDP	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  F  M  N  W  V  R  R  A  P  G  R  G  L  
                    Query_13183  1    GGTCCCTGAGACTCTCGTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATTTTATGAACTGGGTCCGCCGGGCTCCAGGGAGGGGGCTGG  90
V  96.0% (239/249)  IGHV3-21*01  47   ................C.................................AGC................A...........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13183  91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (239/249)  IGHV3-21*01  137  ..........................................................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  D  S  L  H  L  H  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  L  Q  G  S  S  I  
                    Query_13183  181  AGGACTCACTGCATCTGCACATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTACTACTGTGCGAGAGGGTTACAAGGTAGTAGTATCA  270
V  96.0% (239/249)  IGHV3-21*01  227  ..A........T.......A...................................T.............---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD2-2*01   9    ------------------------------------------------------------------------------.........C..  20

                                      T------------------>                                  
                                      R  N  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13183  271  GGAACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  92.3% (12/13)    IGHD2-2*01   21   .-----------------------------------------------------  21
J  100.0% (51/51)   IGHJ5*02     1    ---...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_12801

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           358     3e-101
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	N/A	N/A	CCCCGCATCGCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCCGCATCGCGTTTTGACTAC	ARGPASRFDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  F  G  G  S  F  R  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13184  1    ACCCTGTCCCTCACCTGCGCTGTCTTTGGTGGGTCCTTCAGGGGGTCCTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  96.7% (237/245)  IGHV4-34*01  49   .........................A...............T..T.A...........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_13184  91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAATTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  96.7% (237/245)  IGHV4-34*01  139  ...................................C....................................G.................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  P  A  S  R  F  D  Y  W 
                    Query_13184  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGTCCGCCGCGGACACGGCTGTATATTACTGTGCGAGAGGCCCCGCATCGCGTTTTGACTACTGG  270
V  96.7% (237/245)  IGHV4-34*01  229  ...........................A...................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
J  100.0% (43/43)   IGHJ4*02     6    ------------------------------------------------------------------------------............  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_13184  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (43/43)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_12800

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           343     2e-96
IGHD3-10*01                                                                                           31.5    6e-05
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GGGGTGC	GGTTCGGGGAGTTACTATA	GCACTGGT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGTGCGGTTCGGGGAGTTACTATAGCACTGGTTACTACTACTATGGTACGGACGTC	AKGCGSGSYYSTGYYYYGTDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13185  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTTAGTAATTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.3% (233/247)  IGHV3-23*01  47   .....................................C.....C.GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  V  G  S  G  G  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13185  91   AGTGGGTCTCAGCTATTGTTGGTAGTGGTGGCAACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGATAATTCCA  180
V  94.3% (233/247)  IGHV3-23*01  137  .................AG............T.G................................................C.......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  F  C  A  K  G  C  G  S  G  S  Y  
                    Query_13185  181  GGAACACACTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCCGTATATTTCTGTGCGAAGGGGTGCGGTTCGGGGAGTTACT  270
V  94.3% (233/247)  IGHV3-23*01  227  A......G............................C...G................A.........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.7% (18/19)    IGHD3-10*01  11   --------------------------------------------------------------------------..............T.  26

                                      DR3-IMGT-------------------------->                                 
                                      Y  S  T  G  Y  Y  Y  Y  G  T  D  V  C  G  Q  G  T  T  V  T  V  S  S 
                    Query_13185  271  ATAGCACTGGTTACTACTACTATGGTACGGACGTCTGTGGCCAAGGGACCACGGTCACCGTCTCCTCA  338
D  94.7% (18/19)    IGHD3-10*01  27   ...-----------------------------------------------------------------  29
J  94.7% (54/57)    IGHJ6*02     6    -----------...........C....T.........G..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_12803

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           338     4e-95
IGHD1-26*01                                                                                           10.3    117  
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TAGTG	TGTCCGCTCGAGTTTTA	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATAGTGTGTCCGCTCGAGTTTTAGACGTC	ARDSVSARVLDV	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  D  A  S  G  F  T  F  S  S  H  W  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_13186  1    GGTCCCTGAGACTCTCCTGTGACGCCTCTGGATTCACCTTTAGTAGCCACTGGATGTACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-74*01  47   .....................CA.................C......T........C.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  S  T  D  G  S  R  T  T  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  T  
                    Query_13186  91   TGTGGGTCTCACGTATTAGTACTGATGGGAGTCGCACAACCTACGTGGACTCCGTGGAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-74*01  137  ..................A..G..........A......G.....C..........A.............................G...  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  R  L  Y  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  V  S  A  R  V  
                    Query_13186  181  AGAACAGATTGTATCTGCAATTGAACAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCAAGAGATAGTGTGTCCGCTCGAGTTT  270
V  93.2% (233/250)  IGHV3-74*01  227  ......CGC...........A...............................G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-26*01  5    ----------------------------------------------------------------------.....---------------  9

                                      ------->                                 
                                      L  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_13186  271  TAGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  311
J  97.4% (38/39)    IGHJ6*02     24   --............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_60702

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           31.5    5e-05 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGTC	GTATTATTTTGATAGTAGTGGT	CAGAGTCCCGCG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGTCGTATTATTTTGATAGTAGTGGTCAGAGTCCCGCGTACTTTGACTAC	ARDLSYYFDSSGQSPAYFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13187  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  C  I  S  G  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13187  91   AGTGGGTCTCATGCATCAGTGGTGGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  ............C...T...A..A..................................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  S  Y  Y  F  D  
                    Query_13187  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGTCGTATTATTTTGATA  270
V  98.4% (246/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (20/22)    IGHD3-22*01  1    ----------------------------------------------------------------------------......C.A.....  14

                                      R3-IMGT------------------------>                                  
                                      S  S  G  Q  S  P  A  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_13187  271  GTAGTGGTCAGAGTCCCGCGTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  336
D  90.9% (20/22)    IGHD3-22*01  15   ........----------------------------------------------------------  22
J  97.8% (45/46)    IGHJ4*02     3    --------------------........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_12809

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           325     3e-91
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	AGGAATAGGCTGGAGC	ACTATGATAATAGTGGTT	GCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAAGGAATAGGCTGGAGCACTATGATAATAGTGGTTGCCTTGACTAC	ARRNRLEHYDNSGCLDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  N  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13188  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAATAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.9% (228/248)  IGHV3-30*03  47   ...................................A......G...C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  F  D  G  G  N  K  D  Y  A  D  S  V  R  G  R  F  S  I  S  R  D  N  S  
                    Query_13188  91   AGTGGCTGGCAGTTATATCATTTGATGGAGGTAACAAAGACTATGCAGACTCCGTGAGGGGCCGATTCTCCATCTCCAGAGACAATTCCA  180
V  91.9% (228/248)  IGHV3-30*03  137  .....G...............A.......A....T...T..................A..........A.....................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      N  N  T  V  Y  L  Q  L  N  S  L  S  A  G  D  T  A  V  Y  Y  C  A  R  R  N  R  L  E  H  Y  
                    Query_13188  181  ACAACACAGTATATCTGCAATTGAACAGCCTGAGCGCAGGGGACACGGCTGTCTATTACTGTGCGCGAAGGAATAGGCTGGAGCACTATG  270
V  91.9% (228/248)  IGHV3-30*03  227  .G.....GC.G.........A.............A..T.A............G............A..----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD3-22*01  6    ------------------------------------------------------------------------------------......  11

                                      GT-------------------->                                  
                                      D  N  S  G  C  L  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_13188  271  ATAATAGTGGTTGCCTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  327
D  94.4% (17/18)    IGHD3-22*01  12   ...G........---------------------------------------------  23
J  97.6% (41/42)    IGHJ4*02     7    ---------------...............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_12808

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD4-17*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGTATCT	TACGGTGAC	CCCACAAGTTACTCACGGTG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGGGTATCTTACGGTGACCCCACAAGTTACTCACGGTGTTGACTTC	VKGYLTVTPQVTHGVDF	237	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	19	5	0	79.2
FR3-IMGT	123	236	114	110	4	0	96.5
CDR3-IMGT (germline)	237	243	7	6	1	0	85.7
Total	N/A	N/A	232	218	14	0	94


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  S  V  S  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I 
                    Query_13189  12   TGTGCAGCCTCTGGATTCAGCGTTAGCAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCATCTATT  101
V  94.0% (218/232)  IGHV3-23*01  64   ...................C.T......G.......................................................G.....  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  I  S  G  A  Y  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  S  S  K  N  T  L  Y  L 
                    Query_13189  102  AGTATTAGTGGTGCTTACACATACTACGTAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAGTTCCAAGAACACGCTGTATCTG  191
V  94.0% (218/232)  IGHV3-23*01  154  ...GG........G.AG...........C......................................A......................  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------------CDR3-IMGT---------------
                                       Q  M  S  S  L  R  A  E  D  T  A  I  Y  Y  C  V  K  G  Y  L  T  V  T  P  Q  V  T  H  G  V 
                    Query_13189  192  CAAATGAGCAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGTGAAAGGGTATCTTACGGTGACCCCACAAGTTACTCACGGTGTT  281
V  94.0% (218/232)  IGHV3-23*01  244  .......A.........................G............C.....--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (9/9)     IGHD4-17*01  5    -----------------------------------------------------------.........----------------------  13
J  92.9% (39/42)    IGHJ4*02     7    ----------------------------------------------------------------------------------------..  8

                                      ----->                                  
                                       D  F  W  G  L  G  T  L  A  T  V  S  S  
                    Query_13189  282  GACTTCTGGGGCCTGGGAACCCTGGCCACCGTCTCCTCAG  321
J  92.9% (39/42)    IGHJ4*02     9    ....A........A...........T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_19901

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           310     1e-86
IGHD4-17*01                                                                                           12.2    31   
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGCATGA	GACTAC	C	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAGGGCATGAGACTACCCTACTTTGACAAC	AREGMRLPYFDN	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  W  M  Q  W  V  R  Q  A  P  G  K  G  L  
                    Query_13190  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATACCTACTGGATGCAGTGGGTCCGCCAAGCTCCCGGAAAGGGGCTGG  90
V  89.6% (224/250)  IGHV3-74*01  47   ..........................................G..G............C.................A..G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  T  D  G  S  R  T  Y  Y  P  D  S  L  R  G  R  V  T  I  S  R  D  N  A  
                    Query_13190  91   TGTGGGTCTCACGTATTAATACTGATGGCAGTCGTACATATTACCCGGACTCCCTGAGGGGCCGAGTCACCATCTCCAGAGACAACGCCA  180
V  89.6% (224/250)  IGHV3-74*01  137  .....................G......G...A.C...AGC...G........G...A.......T........................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  S  T  L  Y  L  E  M  N  Y  L  R  A  E  D  S  G  I  Y  Y  C  A  R  E  G  M  R  L  P  Y  
                    Query_13190  181  AGAGCACCCTGTATCTGGAAATGAACTATCTGAGAGCCGAGGACAGCGGTATCTATTACTGTGCAAGAGAGGGCATGAGACTACCCTACT  270
V  89.6% (224/250)  IGHV3-74*01  227  ...A...G.........C........AG.................CG.C.G.G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD4-17*01  2    ------------------------------------------------------------------------------......------  7
J  97.9% (46/47)    IGHJ4*02     2    -------------------------------------------------------------------------------------.....  6

                                      ------->                                  
                                      F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13190  271  TTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  97.9% (46/47)    IGHJ4*02     7    .....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_41293

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           343     2e-96
IGHD6-13*01                                                                                           21.8    0.041
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  L  S  G  G  S  I  S  S  G  G  F  Y  W  N  W  I  R  Q  H  P  G  K  G  
                    Query_13191  4    CCCTGAGACTCTCCTGTACTCTCTCTGGTGGCTCCATCAGCAGTGGTGGTTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  94.0% (234/249)  IGHV4-31*02  50   .....TCC...A........G..............................A........G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  H  Y  S  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  
                    Query_13191  94   TGGAGTGGATTGGGTACATCCATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCTA  183
V  94.0% (234/249)  IGHV4-31*02  140  ....................T..................A.................................A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V  
                    Query_13191  184  AGAACCAATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTAG  273
V  94.0% (234/249)  IGHV4-31*02  230  .......G..........A.....GC...............................A...........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD6-13*01  11   -----------------------------------------------------------------------...........--------  21

                                      ---------------->                                  
                                      G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13191  274  GCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  324
J  98.0% (48/49)    IGHJ3*01     2    --.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_322032

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD3-9*01                                                                                            16.1    2.6   
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGAAGGATTCCT	ATATTTTG	GGGAATCGTCATCTC	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGAAGGATTCCTATATTTTGGGGAATCGTCATCTCACGGTATGGACGTC	ARQEGFLYFGESSSHGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  T  F  T  K  Y
                    Query_13192  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGGTCTGGATACACCTTTACCAAATA  90
V  95.5% (278/291)  IGHV5-51*01  6    ....................................C........................A....T..........G........GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  S  P  G  D  S  N  T  R  Y  S  P
                    Query_13192  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGCAAAGGCCTGGAGTGGATGGGAATCATCTCTCCTGGTGACTCTAATACCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ..............................G....................G.......A.............G................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  V  K  A  S  D  S  A
                    Query_13192  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCGTGAAGGCCTCGGACAGCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  ............................................G.........................C...............C...  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  Q  E  G  F  L  Y  F  G  E  S  S  S  H  G  M  D  V  W  G  Q  G  T  T  V
                    Query_13192  271  CATGTATTACTGTGCGAGACAAGAAGGATTCCTATATTTTGGGGAATCGTCATCTCACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (8/8)     IGHD3-9*01   9    ---------------------------------........-------------------------------------------------  16
J  100.0% (47/47)   IGHJ6*02     16   --------------------------------------------------------..................................  49

                                                   
                                        T  V  S  S 
                    Query_13192  361  CACCGTCTCCTCA  373
J  100.0% (47/47)   IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_138649

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         305     3e-85
IGHD2-2*01                                                                                            23.8    0.011
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGGGGAG	TATTGTAGTAGGTCCAACTGC	ATG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGGGGAGTATTGTAGTAGGTCCAACTGCATGTACGGTCTGGTCGCC	ARGGEYCSRSNCMYGLVA	246	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	221	26	0	89.5


Alignments

                                        <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                           L  R  L  S  C  A  V  S  G  G  S  I  S  S  D  I  Y  S  W  N  W  I  R  Q  P  P  G  M  G  
                    Query_13193    4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTGGCTCCATCTCCAGTGATATTTACTCCTGGAACTGGATCCGGCAGCCACCAGGGATGGGCC  93
V  89.5% (221/247)  IGHV4-30-2*01  50   .....TCC...A..........................AG.....G.GG...........G.......................A.....  139
                                           L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  

                                        ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                        L  E  W  V  G  H  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  R  S  
                    Query_13193    94   TGGAGTGGGTTGGCCACATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCCAGAGTCGAGTCACCATCTCAGTTGACAGGTCCA  183
V  89.5% (221/247)  IGHV4-30-2*01  140  ........A....GT..................G......................A................A.....A..........  229
                                        L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  

                                        -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                        K  K  H  F  S  L  R  L  T  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  G  G  E  Y  C  S  R  
                    Query_13193    184  AGAAACACTTCTCGTTGAGGCTGACCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCCAGGGGGGGGGAGTATTGTAGTAGGT  273
V  89.5% (221/247)  IGHV4-30-2*01  230  ....C..G.....CC...A.....G...........C...............G..............-----------------------  296
                                        K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  85.7% (18/21)    IGHD2-2*01     5    -----------------------------------------------------------------------------...........TA  17

                                        IMGT--------------------->                                 
                                        S  N  C  M  Y  G  L  V  A  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13193    274  CCAACTGCATGTACGGTCTGGTCGCCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  85.7% (18/21)    IGHD2-2*01     18   ...G....---------------------------------------------------  25
J  93.8% (45/48)    IGHJ6*02       15   -----------......A...A..T..................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_26540

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           333     1e-93
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAGTACCAA	ATAGCAGT	CCAATACCCACC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCCAGTACCAAATAGCAGTCCAATACCCACCCTTTGACTTC	VRGQYQIAVQYPPFDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  L  T  D  Y  A  M  Y  W  V  R  Q  A  P  G  K  G  P  
                    Query_13194  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTGACTGACTATGCAATGTACTGGGTCCGCCAGGCTCCAGGCAAGGGGCCGG  90
V  92.8% (231/249)  IGHV3-30*03  47   ....................................C...C.G.AG.....GC...C..............................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  H  G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  
                    Query_13194  91   AGTGGGTGGCCCTTATATCATATCATGGAAGTAATAAATTCTATGCAGACTCCGTGAAGGGCCGATTTACCATCTCCAGAGACATTTCCA  180
V  92.8% (231/249)  IGHV3-30*03  137  ..........AG...........G...............A...........................C................A.....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  G  Q  Y  Q  I  A  V  
                    Query_13194  181  AGAGCACGCTATATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGTGAGAGGCCAGTACCAAATAGCAGTCC  270
V  92.8% (231/249)  IGHV3-30*03  227  ...A......G....................................................C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  5    --------------------------------------------------------------------------------........--  12

                                      T------------------>                                  
                                      Q  Y  P  P  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13194  271  AATACCCACCCTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.7% (43/44)    IGHJ4*02     5    ----------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_322031

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            361     5e-102
IGHD5-18*01                                                                                           16.1    2.4   
IGHJ5*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCATGTTGGCCCGAA	GATACAGC	C	TCGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCATGTTGGCCCGAAGATACAGCCTCGACCAC	ARGMLARRYSLDH	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	260	29	0	90


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  T  F  T  D  H 
                    Query_13195  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCCAGGCTTCTGGATACACCTTCACTGACCAT  91
V  90.0% (260/289)  IGHV1-3*01   7    .....T...........G..........A...............................A.......................AG.T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       P  V  H  W  V  R  Q  A  P  G  Q  R  P  E  W  M  G  W  I  N  P  D  N  D  R  T  K  Y  S  E 
                    Query_13195  92   CCTGTACATTGGGTGCGCCAGGCCCCCGGACAAAGGCCTGAGTGGATGGGATGGATCAACCCTGACAATGACAGAACAAAGTATTCAGAG  181
V  90.0% (260/289)  IGHV1-3*01   97   G..A.G...............................T......................G...G.....GT.AC.....A......C..  186
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  V  Q  G  R  V  A  L  T  I  D  T  S  A  S  R  A  Y  M  E  L  T  S  L  T  S  E  D  T  A 
                    Query_13195  182  AAGGTCCAGGGCAGAGTCGCCCTTACCATTGACACATCCGCGAGCAGAGCCTACATGGAGCTGACGAGCCTGACATCTGAAGACACGGCT  271
V  90.0% (260/289)  IGHV1-3*01   187  ...T..............A..A......GG................C.................GC.......G................  276
                                       K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><--------------CDR3-IMGT-------------->                                  
                                       V  Y  Y  C  A  R  G  M  L  A  R  R  Y  S  L  D  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_13195  272  GTCTATTACTGTGCGAGAGGCATGTTGGCCCGAAGATACAGCCTCGACCACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  356
V  90.0% (260/289)  IGHV1-3*01   277  ..G................------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                    
D  100.0% (8/8)     IGHD5-18*01  4    ----------------------------------........-------------------------------------------  11
J  95.2% (40/42)    IGHJ5*02     10   -------------------------------------------......C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_4022

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           338     5e-95
IGHD6-19*01                                                                                           16.1    2.4  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CTCTGTGAC	CAGTGCCTGGT	CGTTTGGTCCCCCCCCACGACTCT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACTCTGTGACCAGTGCCTGGTCGTTTGGTCCCCCCCCACGACTCTACTTCTTTGACTCC	ARHSVTSAWSFGPPPRLYFFDS	246	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	107	7	0	93.9
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  T  T  Y  H  W  G  W  I  R  Q  P  P  G  K  G  
                    Query_13196  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTACTACTTACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGAC  93
V  93.2% (233/250)  IGHV4-39*01  50   .....TCC...A....C............................G..G....T..................................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  S  I  S  Y  S  G  S  T  D  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  
                    Query_13196  94   TGGAGTGGATTGGGAGTATCTCTTATAGTGGGAGCACCGACTACAACCCGTCCCTCAGGAGTCGAGTCACCATATCCGTGGACACGTCCA  183
V  93.2% (233/250)  IGHV4-39*01  140  .....................A................T..................A.....................A..........  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  P  D  T  A  V  Y  Y  C  A  R  H  S  V  T  S  A  W  
                    Query_13196  184  AGAATCAATTCTCCCTGAAGCTGAGCTCTGTGACCGCCCCAGACACGGCTGTATATTACTGTGCGAGACACTCTGTGACCAGTGCCTGGT  273
V  93.2% (233/250)  IGHV4-39*01  230  ....C..G..............................G.............G.................--------------------  299
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD6-19*01  9    -------------------------------------------------------------------------------.....G.....  19

                                      -CDR3-IMGT--------------------------->                                  
                                      S  F  G  P  P  P  R  L  Y  F  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13196  274  CGTTTGGTCCCCCCCCACGACTCTACTTCTTTGACTCCTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  345
J  93.8% (45/48)    IGHJ4*02     1    ------------------------...A........A..................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_268959

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           378     3e-107
IGHD3-22*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGGTCGGCTCGGGAGCCC	GTAGTGGTTA	CTTCTATATTGCG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGGTCGGCTCGGGAGCCCGTAGTGGTTACTTCTATATTGCGGACTCC	ARGVGSGARSGYFYIADS	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	265	23	0	92


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  S  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  S  D  Y
                    Query_13197  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTTAAAAAGTCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATACAGTTTCAGCGACTA  90
V  92.0% (265/288)  IGHV5-51*03  6    ...........................G......C...............................T...........C..T.C.AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  S  G  K  G  L  E  W  M  G  I  I  Y  P  R  D  S  E  I  T  Y  S  P
                    Query_13197  91   CTGGATCGGCTGGGTGCGCCAAATGTCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTCGTGACTCTGAAATCACCTATAGCCC  180
V  92.0% (265/288)  IGHV5-51*03  96   .....................G...C......................................G..........T.C..GA..C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  H  V  T  I  S  V  D  K  S  I  S  T  A  F  L  Q  W  T  S  L  E  A  S  D  T  A
                    Query_13197  181  GTCCTTCCGAGGCCACGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTTCCTACAGTGGACCAGCCTGGAGGCCTCGGACACCGC  270
V  92.0% (265/288)  IGHV5-51*03  186  ........A......G.............C.......................A...G.......G.......A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  G  V  G  S  G  A  R  S  G  Y  F  Y  I  A  D  S  W  G  Q  G  T  L  V  T
                    Query_13197  271  CATGTATTACTGTGCGAGGGGGGTCGGCTCGGGAGCCCGTAGTGGTTACTTCTATATTGCGGACTCCTGGGGCCAGGGAACCCTGGTCAC  360
V  92.0% (265/288)  IGHV5-51*03  276  ..................------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  100.0% (10/10)   IGHD3-22*01  15   --------------------------------------..........------------------------------------------  24
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------------------------....A........................  37

                                                 
                                        V  S  S  
                    Query_13197  361  CGTCTCCTCAG  371
J  97.5% (39/40)    IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_268958

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD1-26*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CAAATC	AGTGGGACCTAC	CATA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACAAATCAGTGGGACCTACCATATTGACCAC	AKQISGTYHIDH	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13198  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTATGCCATGAGTTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  92.3% (229/248)  IGHV3-23*01  47   ...........................................C..C...........C.................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  Y  T  G  G  S  I  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13198  91   AGTGGGTCTCATCTATTACTTATACTGGTGGTAGTATATACTACGCAGAGTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.3% (229/248)  IGHV3-23*01  137  ...........G......G.GG..G.........C.C............C........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      N  N  T  L  Y  L  H  M  D  S  L  R  V  E  D  T  A  V  Y  F  C  A  K  Q  I  S  G  T  Y  H  
                    Query_13198  181  ACAACACGCTGTATCTGCACATGGACAGCCTGAGAGTCGAGGACACGGCCGTGTACTTCTGTGCGAAACAAATCAGTGGGACCTACCATA  270
V  92.3% (229/248)  IGHV3-23*01  227  .G.................A...A............C...............A..T.A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  91.7% (11/12)    IGHD1-26*01  6    --------------------------------------------------------------------------.......G....----  17

                                      ------->                                  
                                      I  D  H  W  G  Q  G  N  L  V  T  V  S  S  
                    Query_13198  271  TTGACCACTGGGGCCAGGGAAACCTGGTCACCGTCTCCTCAG  312
J  95.2% (40/42)    IGHJ4*02     7    .....T...............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_231960

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           324     7e-91
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGGGATG	AGTGGCTGGT	GATGGCCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGATGAGTGGCTGGTGATGGCCCAC	ARGGDEWLVMAH	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  G  N  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13199  1    GGTCCCTGAGACTCTCCTGTGAAGCGTCTGGATTCACGTTTGGGAACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  91.6% (228/249)  IGHV3-33*01  47   .....................C...............C..CA.T.G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  F  Y  D  G  S  I  K  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13199  91   AGTGGGTGGCAGTTATCTTTTATGATGGAAGTATTAAAGACTATGCAGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAACTCCA  180
V  91.6% (228/249)  IGHV3-33*01  137  ................A.GG.............A....T.........................A....................T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  M  V  F  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  R  G  G  D  E  W  L  V  
                    Query_13199  181  AGAATATGGTGTTCCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTATATTACTGTGCGAGAGGGGGGGATGAGTGGCTGGTGA  270
V  91.6% (228/249)  IGHV3-33*01  227  ....C.C.C...AT......................C...............G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD6-19*01  10   ------------------------------------------------------------------------------..........--  19

                                      ------->                                  
                                      M  A  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13199  271  TGGCCCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (36/36)   IGHJ4*02     13   ------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_231961

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           374     8e-106
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCAATCCCGTATACCCCTACCTT	GGGAGTTA	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCAATCCCGTATACCCCTACCTTGGGAGTTATGACTAT	ARANPVYPYLGSYDY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	69	6	0	92
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	47	4	0	92.2
CDR2-IMGT	151	174	24	20	4	0	83.3
FR3-IMGT	175	288	114	102	12	0	89.5
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	295	267	28	0	90.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  R  K  P  G  A  S  V  R  V  S  C  Q  A  S  G  Y  T  F  T 
                    Query_13200  1    CAGATGCAGCTGGTGCAGTCTGGGGCTGAGGTGAGGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGTCAGGCATCTGGATACACCTTCACC  90
V  90.5% (267/295)  IGHV1-46*01  1    ...G..............................A....................A...T.....CA.......................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  N  Y  L  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  V  I  N  P  G  G  G  G  T  T  Y 
                    Query_13200  91   AGCAATTATTTGCACTGGGTGCGACAGGCCCCTGGACAAGGTCTTGAGTGGATGGGAGTGATCAACCCTGGTGGTGGAGGCACGACCTAC  180
V  90.5% (267/295)  IGHV1-46*01  91   ...T.C...A...............................G...............A.A.........A.......TA....A.G....  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  L  S  I  T  R  D  A  S  T  T  T  V  Y  M  E  L  S  S  L  T  S  E  D 
                    Query_13200  181  GCACAGAAGTTCCAGGGCAGACTCTCCATAACTCGGGACGCGTCCACGACCACAGTCTACATGGAGCTGAGCAGCCTGACATCTGAGGAC  270
V  90.5% (267/295)  IGHV1-46*01  181  .....................G..A....G..CA.....A.........G.............................G..........  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       A  A  V  Y  Y  C  A  R  A  N  P  V  Y  P  Y  L  G  S  Y  D  Y  W  G  Q  G  T  Q  V  T  V 
                    Query_13200  271  GCGGCCGTATACTACTGTGCGAGAGCCAATCCCGTATACCCCTACCTTGGGAGTTATGACTATTGGGGCCAGGGAACCCAGGTCACCGTC  360
V  90.5% (267/295)  IGHV1-46*01  271  A.......G..T.............-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (8/8)     IGHD3-10*01  17   ------------------------------------------------........----------------------------------  24
J  95.1% (39/41)    IGHJ4*02     8    --------------------------------------------------------......C................T..........  41

                                             
                                       S  S  
                    Query_13200  361  TCCTCAG  367
J  95.1% (39/41)    IGHJ4*02     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_60705

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD6-19*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGTA	GGGTATAGTAGTGGCTGGTAC	TATGACAAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGTAGGGTATAGTAGTGGCTGGTACTATGACAAATTTGACTAC	AKDVGYSSGWYYDKFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  G  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13201  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGGCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ...............................................T...C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  G  S  G  S  I  R  E  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13201  91   AGTGGGTCTCAAGTGTTAGTGGAAGTGGTAGTATCAGAGAATACGCAGAATCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  ...........GC.A.......T......G...G..C.T.C........C........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  V  G  Y  S  S  G  
                    Query_13201  181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTATTGTGCGAAAGATGTAGGGTATAGTAGTGGCT  270
V  94.0% (235/250)  IGHV3-23*01  227  ..............C.....................................A.....C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.2% (20/21)    IGHD6-19*01  1    --------------------------------------------------------------------------........C.......  16

                                      GT-------------------->                                  
                                      W  Y  Y  D  K  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13201  271  GGTACTATGACAAATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.2% (20/21)    IGHD6-19*01  17   .....----------------------------------------------------  21
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_231964

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           279     3e-77
IGHD3-10*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAC	TGGAGGGGGCTTCGGGAGC	TTATTATAAC	GGACGGCGGGGACT	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACTGGAGGGGGCTTCGGGAGCTTATTATAACGGACGGCGGGGACTTATGGACGTC	ARLEGASGAYYNGRRGLMDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	12	9	0	57.1
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	214	36	0	85.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  F  S  T  S  D  Y  W  V  W  I  R  Q  T  P  G  K  G 
                    Query_13202  1    ACCCTGTCCCTCACCTGCACCGTCTCTGGCGGCTCCATCTTCAGTACTTCTGACTACTGGGTCTGGATCCGCCAGACCCCCGGGAAGGGG  90
V  85.6% (214/250)  IGHV4-39*01  49   ....................T........T.........AG.....G.AG.T.........G.............C....A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  A  V  H  H  T  R  R  T  Y  Y  N  P  S  L  K  S  R  S  T  M  S  V  D  I  S 
                    Query_13202  91   CTGGAGTGGATTGGGGCTGTTCATCACACTAGAAGAACCTACTACAACCCGTCCCTCAAAAGTCGATCCACCATGTCCGTAGACATATCT  180
V  85.6% (214/250)  IGHV4-39*01  139  ...............AG.A.CT..T.T.G.G.G..C.......................G......GT......A..........CG..C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       R  N  Q  F  S  L  T  L  R  S  V  T  A  A  D  T  S  V  Y  Y  C  A  R  L  E  G  A  S  G  A 
                    Query_13202  181  AGGAACCAGTTCTCCCTGACCCTGAGGTCTGTGACCGCCGCAGACACGTCTGTTTATTACTGTGCGCGACTGGAGGGGGCTTCGGGAGCT  270
V  85.6% (214/250)  IGHV4-39*01  229  .A.................AG.....C.....................G....G............A...--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (10/10)   IGHD3-10*01  22   -----------------------------------------------------------------------------------------.  22

                                      DR3-IMGT------------------------>                                 
                                       Y  Y  N  G  R  R  G  L  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_13202  271  TATTATAACGGACGGCGGGGACTTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTGTCCTCA  336
D  100.0% (10/10)   IGHD3-10*01  23   .........---------------------------------------------------------  31
J  95.3% (41/43)    IGHJ6*02     20   -----------------------................................C...C......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_231965

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGGACAC	TGTAGTAGTGCCATCTGCGATG	GACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTAC	ARHMGHCSSAICDGPDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  Q  K  P  G  E  A  L  K  I  S  C  K  G  S  G  Y  S  F  G  S  Y
                    Query_13203  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGCAAAAGCCGGGGGAGGCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCAGTTA  90
V  96.2% (280/291)  IGHV5-51*01  6    ............................A.......C......T......................................AC...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  R  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_13203  91   CTGGATCGCCCGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.2% (280/291)  IGHV5-51*01  96   ........G.T...............................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_13203  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  96.2% (280/291)  IGHV5-51*01  186  .............................C.........C.................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  M  G  H  C  S  S  A  I  C  D  G  P  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_13203  271  CATGTATTACTGTGCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  96.2% (280/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  86.4% (19/22)    IGHD2-2*01   8    -------------------------------.........A...G....T...-------------------------------------  29
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_13203  361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_268951

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           452     3e-129
IGHD6-13*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAC	ATAGCAGCAGCTGGT	CGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTAC	ARSHSSSWSGFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	289	0	0	100


Alignments

                                       <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                     Query_13204  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  100.0% (289/289)  IGHV5-51*03  6    ..........................................................................................  95
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                       ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                         W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                     Query_13204  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  100.0% (289/289)  IGHV5-51*03  96   ..........................................................................................  185
                                         W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                       ------------------------------------------FR3-IMGT----------------------------------------
                                         S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                     Query_13204  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  100.0% (289/289)  IGHV5-51*03  186  ..........................................................................................  275
                                         S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                       ------------><--------------CDR3-IMGT-------------->                                  
                                         M  Y  Y  C  A  R  S  H  S  S  S  W  S  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_13204  271  CATGTATTACTGTGCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  100.0% (289/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                         M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)    IGHD6-13*01  5    -----------------------...............------------------------------------------------  19
J  100.0% (44/44)    IGHJ4*02     5    ------------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_268950

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         385     4e-109
IGHJ3*02                                                                                              96.8    2e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ATGGGCGCAGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGCGCAGATGATGCTTTTGATATC	ARMGADDAFDI	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	247	1	0	99.6


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13205    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  99.6% (247/248)  IGHV3-30-3*01  47   ..........................................................................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13205    91   AGTGGGTGGCAGTTATATCATATGATGGAAGCAATAAATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  99.6% (247/248)  IGHV3-30-3*01  137  ..........................................................................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  M  G  A  D  D  A  F  
                    Query_13205    181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGGGCTGAGGACACGGCTGTGTATTACTGTGCGAGAATGGGCGCAGATGATGCTTTTG  270
V  99.6% (247/248)  IGHV3-30-3*01  227  ..................................A.................................----------------------  294
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (50/50)   IGHJ3*02       1    -------------------------------------------------------------------------------...........  11

                                        ---->                                  
                                        D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13205    271  ATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  309
J  100.0% (50/50)   IGHJ3*02       12   .......................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_231968

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GCCCCGCATCGCGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCCGCATCGCGTTTTGACTAC	ARGPASRFDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  G  Y  Y  L  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13206  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTGGTTATTATTTGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*01  49   ......................................C...A....C..C.G..G.................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  L  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_13206  91   TGGCTTGGTTTGATCTCTTACAGCGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  92.2% (225/244)  IGHV4-59*01  139  ...A....G.AT....A......T.....C..........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  P  A  S  R  F  D  Y  W 
                    Query_13206  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGTCCGCCGCGGACACGGCTGTATATTACTGTGCGAGAGGCCCCGCATCGCGTTTTGACTACTGG  270
V  92.2% (225/244)  IGHV4-59*01  229  ...........................A....T...........C..G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  100.0% (43/43)   IGHJ4*02     6    ------------------------------------------------------------------------------............  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_13206  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (43/43)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_4020

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           279     3e-77
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	216	28	6	86.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_13207  4    CCCTGAGACTCTCCTGTGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.4% (216/250)  IGHV4-34*01  50   .....TCC...A....C.....C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_13207  94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.4% (216/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_13207  184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.4% (216/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_13207  274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_268954

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           327     9e-92
IGHD2-15*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CCTCTGGTT	TTGTAGTGGTGCTAACTGCTACTC	GGACG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCCTCTGGTTTTGTAGTGGTGCTAACTGCTACTCGGACGACTTTGACTAC	ALWFCSGANCYSDDFDY	246	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	23	32	10	9	1	0	90
CDR1-IMGT	33	56	24	23	1	0	95.8
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	131	24	20	4	0	83.3
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	247	2	2	0	0	100
Total	N/A	N/A	225	217	8	0	96.4


Alignments

                                      <FR1-IMGT><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><----
                                        G  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  A  S  Y  S  S
                    Query_13208  23   TGGAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGCCTCATACAGTAG  112
V  96.4% (217/225)  IGHV3-21*01  66   ..C........................C.................................................T.....C..T...  155
                                        A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S

                                      ---CDR2-IMGT------><----------------------------------------------------FR3-IMGT----------
                                        S  S  S  R  S  V  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q
                    Query_13208  113  TAGTAGTAGTCGTTCCGTATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTGCA  202
V  96.4% (217/225)  IGHV3-21*01  156  ..........A...A.A.........................................................................  245
                                        S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q

                                      ------------------------------------------><--------------------CDR3-IMGT-----------------
                                        M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  L  W  F  C  S  G  A  N  C  Y  S  D  D  F  D
                    Query_13208  203  AATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCCCTCTGGTTTTGTAGTGGTGCTAACTGCTACTCGGACGACTTTGA  292
V  96.4% (217/225)  IGHV3-21*01  246  .............................................---------------------------------------------  290
                                        M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                             
D  91.7% (22/24)    IGHD2-15*01  7    ------------------------------------------------------...........G..G.........------------  30
J  100.0% (45/45)   IGHJ4*02     4    -----------------------------------------------------------------------------------.......  10

                                      --->                                  
                                        Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13208  293  CTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
J  100.0% (45/45)   IGHJ4*02     11   ......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_268957

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           375     3e-106
IGHD6-19*01                                                                                           12.2    34    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	GCTCCAG	GGCTGG	GATT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCCAGGGCTGGGATTCTTTGACTAT	AAPGLGFFDY	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	263	23	0	92


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  A  S  G  N  T  L  T  N  N
                    Query_13209  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCGTCAGTGAAAGTTGCCTGCAAGGCATCCGGAAACACCCTCACCAACAA  90
V  92.0% (263/286)  IGHV1-46*01  6    ..........................................C........G...T.............T...T.....T......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  N  K  T  T  Y  A  Q
                    Query_13209  91   CTTCATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTAATAAGACAACCTATGCACA  180
V  92.0% (263/286)  IGHV1-46*01  96   ..AT..................................................................GG..GC....G...C.....  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  L  T  M  T  R  V  T  S  T  R  T  V  Y  M  E  L  S  N  L  R  S  E  D  T  A
                    Query_13209  181  GAAGTTCCAGGGCAGACTGACCATGACTAGGGTCACGTCCACGAGAACAGTCTACATGGAGCTGAGCAACCTGAGATCTGAGGACACGGC  270
V  92.0% (263/286)  IGHV1-46*01  186  ................G.C........C....A............C......................G.....................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        V  Y  Y  C  A  A  P  G  L  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_13209  271  CGTGTATTACTGCGCGGCTCCAGGGCTGGGATTCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  347
V  92.0% (263/286)  IGHV1-46*01  276  ............T...-------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                              
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------......------------------------------------------------  18
J  95.5% (42/44)    IGHJ4*02     5    ---------------------------------.........C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_19904

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_13210  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_13210  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_13210  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_13210  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_326464

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           288     5e-80
IGHD3-22*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAC	ATAGTACTGG	CCGAATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATAGTACTGGCCGAATCATTGACTAT	ARAHSTGRIIDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G 
                    Query_13211  1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  86.8% (217/250)  IGHV4-31*01  49   ...................C................A...G.A....TGG..A...C....G.............CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  Y  I  Y  H  V  E  S  T  S  R  N  P  S  L  K  S  Q  L  T  I  S  L  D  P  S 
                    Query_13211  91   CTGGAGTGGATGGGATACATCTATCACGTTGAGAGCACCTCCCGCAACCCGTCCCTCAAGAGTCAACTTACCATTTCACTCGACCCGTCT  180
V  86.8% (217/250)  IGHV4-31*01  139  ...........T..G.........T..AG..G........A.TA....................T.G.......A...G.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  S  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  S  T  G  R  I 
                    Query_13211  181  AAGAGCCAGTTCTCCCTAAAACTGACCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGCGCGAGAGCACATAGTACTGGCCGAATC  270
V  86.8% (217/250)  IGHV4-31*01  229  ....A............G..G....G....G...............................T.......--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-22*01  12   -------------------------------------------------------------------------......G...-------  21

                                      -------->                                  
                                       I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13211  271  ATTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.6% (41/42)    IGHJ4*02     7    -.......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_1982

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           358     4e-101
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCACCCAA	TATGGTTCGGAGAGT	CTG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCACCCAATATGGTTCGGAGAGTCTG	ARATQYGSESL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	259	30	0	89.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_13212  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACTTCCTAT  91
V  89.6% (259/289)  IGHV1-18*01  7    .................................................A.................................CAG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  S  W  V  R  Q  A  P  G  G  G  L  E  W  M  G  W  S  G  P  N  N  D  D  A  H  Y  G  H 
                    Query_13212  92   GGTGTCAGCTGGGTGCGCCAGGCCCCTGGAGGAGGGCTTGAATGGATGGGATGGAGCGGCCCTAACAATGATGACGCACACTATGGACAT  181
V  89.6% (259/289)  IGHV1-18*01  97   ...A.............A............CA.........G.............T.A..G..T......G.A..A..A......C...G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  L  R  G  R  V  T  I  T  T  D  T  S  T  T  T  S  F  M  E  L  R  S  L  R  S  A  D  T  A 
                    Query_13212  182  AGCCTCCGGGGCAGAGTCACCATTACCACAGACACATCAACGACCACATCCTTCATGGAGTTGAGGAGCCTGAGATCTGCCGACACGGCC  271
V  89.6% (259/289)  IGHV1-18*01  187  .AG....A...............G..............C....G....G...A.......C..................A..........  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------CDR3-IMGT----------->                                  
                                       V  Y  Y  C  A  R  A  T  Q  Y  G  S  E  S  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13212  272  GTATATTACTGTGCGAGAGCCACCCAATATGGTTCGGAGAGTCTGTGGGGCCAGGGAACCCTGGTCACAGTCTCCTCAG  350
V  89.6% (259/289)  IGHV1-18*01  277  ..G................------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                              
D  93.3% (14/15)    IGHD3-10*01  8    ---------------------------..........G....-------------------------------------  22
J  97.1% (33/34)    IGHJ4*02     15   ---------------------------------------------.......................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_326466

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           12.2    30   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGACGGGT	TGGCTG	CCC	GACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGACGGGTTGGCTGCCCGACGAC	ARGTGWLPDD	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  Y  C  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13213  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTACTACTGCAACTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  93.9% (229/244)  IGHV4-59*01  49   ...............................G..........A..........G.G..................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  N  T  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13213  91   TGGATTGGACATATCTACAACACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  93.9% (229/244)  IGHV4-59*01  139  ........GT.......TT...G.....G.............................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  T  G  W  L  P  D  D  W 
                    Query_13213  181  CAGTTCTCCTTGAACCTGAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGACGGGTTGGCTGCCCGACGACTGG  270
V  93.9% (229/244)  IGHV4-59*01  229  .........C....G....G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-19*01  12   ------------------------------------------------------------------------......------------  17
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------...T.....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_13213  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.5% (39/40)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_326467

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           369     2e-104
IGHD5-18*01                                                                                           14.1    7.8   
IGHJ4*02                                                                                              75.7    5e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	240	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13214  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (240/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_13214  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  98.4% (240/244)  IGHV4-59*01  139  .........................................................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_13214  181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  98.4% (240/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_13214  271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_1987

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD6-19*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TTCCTCT	TGGCTGG	GACC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATTCCTCTTGGCTGGGACCTGATGCTTTTCAAATC	ARDSSWLGPDAFQI	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  S  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13215  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGAAGTTACTACTGGAATTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ...............................G.........T.............GC.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  M  Y  Y  S  G  T  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  G  D  T  S  K  N 
                    Query_13215  91   TGGATTGGGTATATGTATTACAGTGGGACTACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGGAGACACGTCTAAGAAC  180
V  93.1% (228/245)  IGHV4-59*01  139  ..............C.............GC.....................A.....................T.........C......  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  F  L  T  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  S  W  L  G  P  D  A 
                    Query_13215  181  CAATTTTTCCTGACGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGGGATTCCTCTTGGCTGGGACCTGATGCT  270
V  93.1% (228/245)  IGHV4-59*01  229  ..G..C.C.....A.C.....................................C........A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD6-19*01  12   ------------------------------------------------------------------------.......-----------  18
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------------------.......  7

                                      -------->                                  
                                       F  Q  I  W  G  Q  G  T  I  V  T  V  S  S  
                    Query_13215  271  TTTCAAATCTGGGGCCAGGGGACAATTGTCACCGTGTCTTCAG  313
J  90.0% (45/50)    IGHJ3*02     8    ...G.T...........A........G........C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_326461

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            360     1e-101
IGHD2-15*01                                                                                           14.1    8.7   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATATGC	GGATATT	CTGTCCTTAGGTTTTAGGCGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATATGCGGATATTCTGTCCTTAGGTTTTAGGCGTTACTACTTTGACTAC	AKYADILSLGFRRYYFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	238	8	0	96.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13216  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.7% (238/246)  IGHV3-7*01   47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  Y  E  K  Y  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_13216  91   AGTGGGTGGCCAACATAAAGGAAGATGGATATGAGAAATACTATGTGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.7% (238/246)  IGHV3-7*01   137  ....................C........AG..........................A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  I  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  Y  A  D  I  L  S  L  
                    Query_13216  181  AGAACTCACTGTATCTGCAAATCAACAGCCTGAGAGTCGAGGACACGGCTGTGTATTATTGTGCGAAATATGCGGATATTCTGTCCTTAG  270
V  96.7% (238/246)  IGHV3-7*01   227  ......................G.............C.....................C.......------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-15*01  2    -------------------------------------------------------------------------.......----------  8

                                      IMGT--------------------->                                  
                                      G  F  R  R  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13216  271  GTTTTAGGCGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
J  100.0% (48/48)   IGHJ4*02     1    ------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_326462

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           372     2e-105
IGHD2-2*01                                                                                            23.8    0.011 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAG	TTGTAGTAGTAACACCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGTTGTAGTAGTAACACCTGCTACTACGAAATGGACGTC	ARVSCSSNTCYYEMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	241	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13217  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.8% (241/244)  IGHV4-59*01  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13217  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGGTAGACACGTCCAAGAAC  180
V  98.8% (241/244)  IGHV4-59*01  139  .......................................................................A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  C  S  S  N  T  C  Y 
                    Query_13217  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTAAGTTGTAGTAGTAACACCTGCTAC  270
V  98.8% (241/244)  IGHV4-59*01  229  ...............................................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (16/18)    IGHD2-2*01   7    --------------------------------------------------------------------...........C..G...----  24
J  96.2% (50/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13217  271  TACGAAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  96.2% (50/52)    IGHJ6*02     15   ....GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_98798

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           357     1e-100
IGHD1-26*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	GTGTCGTC	TGGGACCTACTAC	CTTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTGTCGTCTGGGACCTACTACCTTCTTGACCAC	ARVSSGTYYLLDH	283	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	69	65	61	4	0	93.8
CDR1-IMGT	70	93	24	20	4	0	83.3
FR2-IMGT	94	144	51	48	3	0	94.1
CDR2-IMGT	145	168	24	19	5	0	79.2
FR3-IMGT	169	282	114	103	11	0	90.4
CDR3-IMGT (germline)	283	288	6	5	1	0	83.3
Total	N/A	N/A	284	256	28	0	90.1


Alignments

                                      <---------------------------FR1-IMGT----------------------------><-------CDR1-IMGT------><
                                         V  Q  S  G  A  E  V  K  K  P  G  E  S  L  T  I  S  C  K  T  S  G  Y  T  F  T  N  N  W  
                    Query_13218  5    TGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGACTTCTGGATATACCTTTACCAACAACTGGA  94
V  90.1% (256/284)  IGHV5-51*03  11   .........................A...................A.............GG.........C.G........G.T......  100
                                         V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y  W  

                                      --------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------------
                                      I  A  W  A  R  Q  M  P  G  K  G  P  E  W  M  G  I  V  Y  P  R  D  S  T  T  R  Y  S  P  S  
                    Query_13218  95   TCGCCTGGGCGCGCCAGATGCCCGGGAAAGGCCCGGAGTGGATGGGGATCGTCTATCCTCGTGACTCCACTACCAGATACAGTCCGTCCT  184
V  90.1% (256/284)  IGHV5-51*03  101  ...G.....T.......................T................A........G.......TGA............C.......  190
                                      I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P  S  

                                      -------------------------------------FR3-IMGT---------------------------------------------
                                      F  E  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  H  S  L  E  A  S  D  T  A  M  
                    Query_13218  185  TTGAGGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACTACCGCCTACCTGCAGTGGCACAGCCTGGAGGCCTCGGACACCGCCATGT  274
V  90.1% (256/284)  IGHV5-51*03  191  .CC.A..................................GC..................AG.......A.....................  280
                                      F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A  M  

                                      -------><--------------CDR3-IMGT-------------->                                  
                                      Y  F  C  A  R  V  S  S  G  T  Y  Y  L  L  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13218  275  ATTTTTGTGCCAGAGTGTCGTCTGGGACCTACTACCTTCTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  355
V  90.1% (256/284)  IGHV5-51*03  281  ...AC.....G...-------------------------------------------------------------------  294
                                      Y  Y  C  A  R                                                                    
D  92.3% (12/13)    IGHD1-26*01  8    ----------------------.....G.......----------------------------------------------  20
J  97.6% (41/42)    IGHJ4*02     7    ---------------------------------------.....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_98796

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD2-2*01                                                                                            18.0    0.58 
IGHJ6*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGACTGGAGA	AGTACCAACTGC	GACTACCAA	ATGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGGAGAAGTACCAACTGCGACTACCAAATGGTCGTC	ARVDWRSTNCDYQMVV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_13219  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGCCAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A..GA...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_13219  91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  W  R  S  T  N  C  D 
                    Query_13219  181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTATTGTGCGAGAGTGGACTGGAGAAGTACCAACTGCGAC  270
V  90.6% (221/244)  IGHV4-59*01  229  C..............................CT..............G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD2-2*01   14   ---------------------------------------------------------------------------.......G....---  25

                                      -------------->                                 
                                       Y  Q  M  V  V  W  G  L  G  T  R  V  I  V  S  S 
                    Query_13219  271  TACCAAATGGTCGTCTGGGGCCTAGGGACCAGGGTAATCGTCTCCTCA  318
J  88.1% (37/42)    IGHJ6*02     21   ------....A...........A........C...C.C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_1989

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           329     3e-92
IGHD5-18*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	CTTAC	GTGGATTCGCCTATGGTT	CAC	TTGAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAGGACTTACGTGGATTCGCCTATGGTTCACTTGAGTTC	AKDLRGFAYGSLEF	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  V  
                    Query_13220  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTACACCATGCACTGGGTCCGTCAAGCTCCGGGCAAGGGTGTGG  90
V  92.0% (230/250)  IGHV3-43*01  47   .................................................T.............................G......C...  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  L  T  W  D  G  T  R  T  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  
                    Query_13220  91   AATGGGTCTCTCTTCTTACTTGGGATGGGACTAGAACATACTATGCGGACTCTGTGAAGGGCCGATTCATCATCTCCAGAGACAAGAGCA  180
V  92.0% (230/250)  IGHV3-43*01  137  .G............A...G.........TGG...C...........A......................C...............C....  226
                                      E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  K  S  L  F  L  Q  M  N  S  L  R  P  E  D  S  A  L  Y  Y  C  A  K  D  L  R  G  F  A  Y  
                    Query_13220  181  AAAAATCACTGTTTCTGCAAATGAACAGTCTGAGACCTGAGGACAGCGCCTTATATTACTGTGCAAAGGACTTACGTGGATTCGCCTATG  270
V  92.0% (230/250)  IGHV3-43*01  227  ....C..C....A......................A.........C......G..............A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A  K                       
D  83.3% (15/18)    IGHD5-18*01  1    ---------------------------------------------------------------------------......A.AG.....  15

                                      ------------->                                  
                                      G  S  L  E  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13220  271  GTTCACTTGAGTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
D  83.3% (15/18)    IGHD5-18*01  16   ...---------------------------------------------  18
J  95.2% (40/42)    IGHJ4*02     7    ------....C.A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_98794

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           332     3e-93
IGHD2-21*01                                                                                           10.3    123  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCG	GGTGA	AGACAAGCACTATCATTAT	GGTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCGGGTGAAGACAAGCACTATCATTATGGTTTGGACGTC	ARDPGEDKHYHYGLDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  N  F  S  D  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13221  1    GGTCCCTGAGACTCTCCTGTGTAGCGTCTGGATTCAACTTCAGTGACTATGGCATCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-33*01  47   .....................C..............C.......AG.........G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  Y  G  S  I  H  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_13221  91   AGTGGGTGGCAGTTATATGGTATTATGGAAGTATTCACAACTATGCAGATTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCA  180
V  92.4% (231/250)  IGHV3-33*01  137  .......................G.........A.A.AT..........C.....................A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  V  Y  L  Q  M  Y  S  L  R  G  D  D  T  A  V  Y  Y  C  A  R  D  P  G  E  D  K  H  
                    Query_13221  181  AGAACACGGTTTATCTGCAAATGTACAGCCTCAGAGGCGACGACACGGCTGTCTATTACTGTGCGAGAGATCCGGGTGAAGACAAGCACT  270
V  92.4% (231/250)  IGHV3-33*01  227  ........C.G............A.......G....C...G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-21*01  14   --------------------------------------------------------------------------.....-----------  18

                                      T------------------>                                 
                                      Y  H  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13221  271  ATCATTATGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  97.8% (44/45)    IGHJ6*02     18   --------...A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_326468

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*04                                                                                           360     1e-101
IGHD3-9*01                                                                                            18.0    0.58  
IGHJ3*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*04	IGHD3-9*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCCCAG	GACGGGTTATTA	C	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCCCAGGACGGGTTATTACGATGGTTTTGAAATC	AREPRTGYYDGFEI	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  
                    Query_13222  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGAGACTACTACATGAGCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-11*04  47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  N  T  G  T  T  V  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13222  91   AGTGGGTTTCATACATTAGTAATACTGGTACTACCGTATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-11*04  137  .....................G..G.....G....A...........................................G..........  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  N  S  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  P  R  T  G  Y  Y  
                    Query_13222  181  GGAACTCACTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGCGAGAGAGCCCAGGACGGGTTATTACG  270
V  96.0% (240/250)  IGHV3-11*04  227  A...........A.....................................G.G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD3-9*01   16   ----------------------------------------------------------------------------...T........--  27
J  93.9% (46/49)    IGHJ3*02     2    -----------------------------------------------------------------------------------------.  2

                                      ------------->                                  
                                      D  G  F  E  I  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13222  271  ATGGTTTTGAAATCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  318
J  93.9% (46/49)    IGHJ3*02     3    ...C......T..................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_98792

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           325     3e-91
IGHD2-15*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGAGTTC	TTGTATTGGTGGT	TCTTGCTACCTGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGAGTTCTTGTATTGGTGGTTCTTGCTACCTGTTCTACTACTACGCTGTGGACGTC	AGSSCIGGSCYLFYYYAVDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	227	19	0	92.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  S  A  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_13223  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATCAGTGCTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  92.3% (227/246)  IGHV4-39*01  49   ..................A............G.........CAG..G..........................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  V  G  I  I  Y  H  S  G  S  A  F  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  T  S 
                    Query_13223  91   CTGGAGTGGGTGGGGATTATCTATCATAGTGGGAGCGCCTTCTACAACCCGTCCCTCGAGAGCCGAGTCACCATGTCCGTAGACACGTCC  180
V  92.3% (227/246)  IGHV4-39*01  139  .........A.T....G.......T...........A...A................A....T...........A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  C  I  G  G  S 
                    Query_13223  181  AAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACGGCCGCAGACACGGCTGTTTATTACTGTGCGGGGAGTTCTTGTATTGGTGGTTCT  270
V  92.3% (227/246)  IGHV4-39*01  229  .....................C.............C.................G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  92.3% (12/13)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G.......---  19

                                      DR3-IMGT------------------------>                                 
                                       C  Y  L  F  Y  Y  Y  A  V  D  V  W  G  Q  G  T  T  I  T  V  S  S 
                    Query_13223  271  TGCTACCTGTTCTACTACTACGCTGTGGACGTCTGGGGCCAAGGGACCACGATCACCGTCTCCTCA  336
J  94.5% (52/55)    IGHJ6*02     8    -----------...........G.A..........................G..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_98791

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_13224  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_13224  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_13224  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_13224  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_98790

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           372     2e-105
IGHD2-2*01                                                                                            41.1    7e-08 
IGHJ3*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGCGCGAG	ATTGTAGTAGTACCAGCTGCT	TTGGAACTGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCGCGAGATTGTAGTAGTACCAGCTGCTTTGGAACTGGTGCTTTTGATATC	ARGARDCSSTSCFGTGAFDI	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	244	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  D  Y  Y  W  N  W  I  R  Q  H  P  E  K  G 
                    Query_13225  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGATGATTACTACTGGAACTGGATCCGCCAGCACCCAGAGAAGGGC  90
V  97.6% (244/250)  IGHV4-31*01  49   ..............................................G..G...........G....................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 
                    Query_13225  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACGTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (244/250)  IGHV4-31*01  139  ......................................C...................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  R  D  C  S  S 
                    Query_13225  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGGGGCGCGAGATTGTAGTAGT  270
V  97.6% (244/250)  IGHV4-31*01  229  .....................................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (21/21)   IGHD2-2*01   6    -------------------------------------------------------------------------------...........  16

                                      DR3-IMGT------------------------>                                  
                                       T  S  C  F  G  T  G  A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13225  271  ACCAGCTGCTTTGGAACTGGTGCTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  337
D  100.0% (21/21)   IGHD2-2*01   17   ..........---------------------------------------------------------  26
J  100.0% (47/47)   IGHJ3*02     4    --------------------...............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_242036

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            339     2e-95
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTTTG	ACTATGATAGTCGTGGCTTTTAC	AGACGTTCTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTTTGACTATGATAGTCGTGGCTTTTACAGACGTTCTAACTACTTTGACTTC	ARGFDYDSRGFYRRSNYFDF	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_13226  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTACTAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  94.3% (231/245)  IGHV4-4*01   49   ..................G.....................GC.G......C.......................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  S  T  Q  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_13226  91   GAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCCAGTACAACCCGTCACTCAAGAGTCGAGTCACGATATCAGTAGACAAGTCCAAG  180
V  94.3% (231/245)  IGHV4-4*01   139  ....................................A.C...........C.................C.....................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------------CDR3
                                       N  Q  I  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  F  D  Y  D  S  R  G 
                    Query_13226  181  AACCAGATCTCCCTGAGGTTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGGCTTTGACTATGATAGTCGTGGC  270
V  94.3% (231/245)  IGHV4-4*01   229  ......T.........A.C....C...............................G.........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  87.0% (20/23)    IGHD3-22*01  6    -------------------------------------------------------------------------...........A....T  22

                                      -IMGT------------------------>                                  
                                       F  Y  R  R  S  N  Y  F  D  F  W  G  R  G  T  L  V  A  V  S  S  
                    Query_13226  271  TTTTACAGACGTTCTAACTACTTTGACTTCTGGGGCCGGGGAACCCTGGTCGCTGTCTCCTCAG  334
D  87.0% (20/23)    IGHD3-22*01  23   .A....----------------------------------------------------------  28
J  91.7% (44/48)    IGHJ4*02     1    ----------------............A........A.............A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_242037

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           313     1e-87
IGHD3-10*01                                                                                           10.3    116  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GGGGA	CTTCAGGC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGACTTCAGGCCTTTGACTCC	ARGGLQAFDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  G  G  L  Y  W  T  W  I  R  Q  H  P  G  K  G 
                    Query_13227  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAACAGTGGTGGACTCTACTGGACTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  90.0% (225/250)  IGHV4-31*03  49   .......................C................G.........TTA........GC...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  F  Y  T  G  H  T  Y  Y  N  P  S  L  R  S  R  L  T  I  S  L  D  T  S 
                    Query_13227  91   CTAGAGTGGATTGGTTACATCTTTTACACTGGACACACCTACTACAATCCGTCCCTCAGGAGTCGACTTACCATTTCACTGGACACATCT  180
V  90.0% (225/250)  IGHV4-31*03  139  ..G...........G.......A.....G...GAG............C..........A.......G.......A...G.A.....G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       E  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  L  Q  A  F  D 
                    Query_13227  181  GAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGGGGACTTCAGGCCTTTGAC  270
V  90.0% (225/250)  IGHV4-31*03  229  A...................G.....C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-10*01  16   ----------------------------------------------------------------------.....---------------  20
J  97.7% (43/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13227  271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.7% (43/44)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_242034

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           361     4e-102
IGHD1-7*01                                                                                            16.1    2.2   
IGHJ2*01                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-7*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	TCTCAGGGAGTCGG	GGAACTAC	GGAG	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGTCTCAGGGAGTCGGGGAACTACGGAGTGGTACTTCGATCTC	ARVSGSRGTTEWYFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13228  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACTTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.4% (240/249)  IGHV3-74*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  M  K  S  D  G  S  S  T  S  Y  A  D  S  V  Q  G  R  F  T  I  S  R  D  N  A  
                    Query_13228  91   TGTGGGTCTCACGTATGAAAAGCGATGGAAGTAGCACAAGCTACGCGGACTCCGTGCAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (240/249)  IGHV3-74*01  137  ................T..T..T.....G...........................A.................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  S  G  S  R  G  T  
                    Query_13228  181  GGAACACGTTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGTCTCAGGGAGTCGGGGAACTA  270
V  96.4% (240/249)  IGHV3-74*01  227  A.......C............................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD1-7*01   10   -----------------------------------------------------------------------------------.......  16

                                      T------------------>                                  
                                      T  E  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_13228  271  CGGAGTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  324
D  100.0% (8/8)     IGHD1-7*01   17   .-----------------------------------------------------  17
J  100.0% (49/49)   IGHJ2*01     5    -----.................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_322690

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            324     8e-91
IGHD1-26*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAT	GCTGGGC	GGGAGCT	GGACCCCAGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAAAGATGCTGGGCGGGAGCTGGACCCCAGTTACTTAAACTAC	AKDAGRELDPSYLNY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	251	9	8	1	0	88.9
Total	N/A	N/A	251	229	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_13229  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGTTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAGGGGCCTGG  90
V  91.2% (229/251)  IGHV3-9*01   47   ....................................CC...........................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  G  W  N  G  D  S  I  G  Y  A  G  A  V  Y  G  R  F  T  I  S  R  D  N  A  
                    Query_13229  91   AGTGGGTCTCAGGTATTGGTTGGAATGGGGATAGCATCGGCTACGCGGGCGCTGTGTATGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.2% (229/251)  IGHV3-9*01   137  .................A........A.T.G......A.....T....A.T.....A.G...............................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  K  S  V  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  A  G  R  E  L  D  
                    Query_13229  181  AGAAGTCCGTCTACCTGCAAATGAACAGTCTGAGACCTGAGGACACGGCCGTTTATTATTGTGCTAAAGATGCTGGGCGGGAGCTGGACC  270
V  91.2% (229/251)  IGHV3-9*01   227  ....C...C.G..T.....................G..............T.G.....C.....A......-------------------  297
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (7/7)     IGHD1-26*01  9    ------------------------------------------------------------------------------.......-----  15

                                      ---------------->                                  
                                      P  S  Y  L  N  Y  W  G  Q  G  T  V  V  I  V  S  S  
                    Query_13229  271  CCAGTTACTTAAACTACTGGGGCCAGGGAACCGTGGTCATCGTCTCCTCAG  321
J  91.3% (42/46)    IGHJ4*02     3    -----.....TG....................C......C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_242033

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           452     3e-129
IGHD6-13*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAC	ATAGCAGCAGCTGGT	CGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTAC	ARSHSSSWSGFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	289	0	0	100


Alignments

                                       <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                     Query_13230  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  100.0% (289/289)  IGHV5-51*03  6    ..........................................................................................  95
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                       ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                         W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                     Query_13230  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  100.0% (289/289)  IGHV5-51*03  96   ..........................................................................................  185
                                         W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                       ------------------------------------------FR3-IMGT----------------------------------------
                                         S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                     Query_13230  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  100.0% (289/289)  IGHV5-51*03  186  ..........................................................................................  275
                                         S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                       ------------><--------------CDR3-IMGT-------------->                                  
                                         M  Y  Y  C  A  R  S  H  S  S  S  W  S  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                     Query_13230  271  CATGTATTACTGTGCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  100.0% (289/289)  IGHV5-51*03  276  ...................-------------------------------------------------------------------  294
                                         M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)    IGHD6-13*01  5    -----------------------...............------------------------------------------------  19
J  100.0% (44/44)    IGHJ4*02     5    ------------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_242030

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         380     1e-107
IGHD3-3*01                                                                                            33.4    1e-05 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGC	TACGATTTTTGGAGTGG	ACGTACCAAAACACACAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGCTACGATTTTTGGAGTGGACGTACCAAAACACACAATGACTGC	ASRYDFWSGRTKTHNDC	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	245	2	0	99.2


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13231    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  99.2% (245/247)  IGHV3-30-3*01  47   ..........................................................................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  D  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13231    91   AGTGGGTGGCAGTTATATCATATGATGGAAGCAATACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  99.2% (245/247)  IGHV3-30-3*01  137  ....................................A.....................................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  V  Y  Y  C  A  S  R  Y  D  F  W  S  G  
                    Query_13231    181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAACTGAGGACACGGCTGTGTATTACTGTGCGAGCCGCTACGATTTTTGGAGTGGAC  270
V  99.2% (245/247)  IGHV3-30-3*01  227  ...................................G...............................-----------------------  293
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (17/17)   IGHD3-3*01     5    -----------------------------------------------------------------------.................--  21

                                        GT-------------------->                                
                                        R  T  K  T  H  N  D  C  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13231    271  GTACCAAAACACACAATGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  325
J  97.4% (38/39)    IGHJ4*02       8    ----------------.....A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_242038

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            313     1e-87
IGHD1-26*01                                                                                           19.9    0.16 
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-26*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGCAGAC	AGTGGGAGCT	TCTCTAAT	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGCAGACAGTGGGAGCTTCTCTAATTGGTACTTCGATCTC	ARDADSGSFSNWYFDL	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	224	24	0	90.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  V  S  I  S  S  D  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_13232  1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGTCTCCATCAGCAGTGATAACTGGTGGAGTTGGGTACGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.3% (224/248)  IGHV4-4*01   49   ...................C...........G.............AG..................C........................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  Q  I  F  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_13232  91   GAGTGGATTGGACAAATCTTTCATAGTGGCAGCACCAATTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACAAGTCTAAG  180
V  90.3% (224/248)  IGHV4-4*01   139  ...........GG......A.........G........C......................................A........C...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  Q  F  S  L  K  V  N  S  V  S  A  A  D  T  A  I  Y  F  C  A  R  D  A  D  S  G  S  F  S 
                    Query_13232  181  AACCAGTTTTCCCTAAAAGTGAATTCTGTGAGTGCCGCGGACACGGCCATTTACTTCTGTGCGAGAGATGCAGACAGTGGGAGCTTCTCT  270
V  90.3% (224/248)  IGHV4-4*01   229  ........C.....G..GC...GC.......CC...............G.G..T.G............----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (10/10)   IGHD1-26*01  6    ---------------------------------------------------------------------------..........-----  15

                                      ----------------->                                  
                                       N  W  Y  F  D  L  W  G  P  G  T  L  V  T  V  S  S  
                    Query_13232  271  AATTGGTACTTCGATCTCTGGGGTCCTGGCACCCTGGTCACTGTCTCCTCAG  322
J  95.9% (47/49)    IGHJ2*01     5    ---....................C.G..........................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_242039

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	CAGCTA	TACAATTTTTGGAGTGG	ACACATAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACAGCTATACAATTTTTGGAGTGGACACATATTACTTTGACTGG	ANSYTIFGVDTYYFDW	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  S  S  C  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13233  1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCACCTTTAGCAGCTGTGCCATGAGCTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.7% (234/247)  IGHV3-23*01  47   .......................G........................A..............................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  P  S  I  S  G  S  G  G  T  T  Y  Y  A  D  P  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13233  91   AGTGGGTCCCAAGTATTAGTGGGAGTGGTGGTACGACATACTACGCAGACCCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAACTCCA  180
V  94.7% (234/247)  IGHV3-23*01  137  ........T..GC.........T..........GC...............T.............G....................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  N  S  Y  T  I  F  G  V  
                    Query_13233  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAACAGCTATACAATTTTTGGAGTGG  270
V  94.7% (234/247)  IGHV3-23*01  227  .........................................................A.........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.1% (16/17)    IGHD3-3*01   5    -------------------------------------------------------------------------...G.............  21

                                      T------------------>                                  
                                      D  T  Y  Y  F  D  W  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13233  271  ACACATATTACTTTGACTGGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  95.7% (44/46)    IGHJ4*02     3    --------..........AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_41295

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCAC	GTATCACTATGACAATGGTGGTTATT	GGACCGCGGGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCACGTATCACTATGACAATGGTGGTTATTGGACCGCGGGGGCTTTTGATATC	ARTTYHYDNGGYWTAGAFDI	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13234  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCTTGAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.5% (232/243)  IGHV4-59*01  49   ....................................A.C...................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  F  G  F  I  Y  Y  S  G  S  T  T  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_13234  91   TGGTTTGGTTTTATCTATTACAGTGGGAGCACCACCTACAACCCTTCCCTCAGGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAAG  180
V  95.5% (232/243)  IGHV4-59*01  139  ...A....G.A.......................A.........C.......A.....................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  T  Y  H  Y  D  N  G  G 
                    Query_13234  181  CAGTTCTCCCTGAAGCTGAGATCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAACCACGTATCACTATGACAATGGTGGT  270
V  95.5% (232/243)  IGHV4-59*01  229  ....................C..........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (22/26)    IGHD3-22*01  1    --------------------------------------------------------------------....T.......T.G.A.....  22

                                      GT------------------------>                                  
                                       Y  W  T  A  G  A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_13234  271  TATTGGACCGCGGGGGCTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  331
D  84.6% (22/26)    IGHD3-22*01  23   ....---------------------------------------------------------  26
J  97.8% (45/46)    IGHJ3*02     5    ---------------...........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_138642

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            360     1e-101
IGHD2-8*01                                                                                            12.2    31    
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TACTAA	AACAAGACCTGGGGCGACG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACTAAAACAAGACCTGGGGCGACG	ARDTKTRPGAT	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	112	2	0	98.2
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  I  Y  Y  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_13235  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTATTTACTACTGGACTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  96.4% (239/248)  IGHV4-4*02   49   ..............................................G.A...GG....G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  S  G  T  A  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 
                    Query_13235  91   GAGTGGATTGGGGAAATCTATCATAGTGGGACCGCCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAG  180
V  96.4% (239/248)  IGHV4-4*02   139  ...............................G.A........................................................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  T  K  T  R  P  G  A 
                    Query_13235  181  AACCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATACTAAAACAAGACCTGGGGCG  270
V  96.4% (239/248)  IGHV4-4*02   229  .................G....G.............................................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (6/6)     IGHD2-8*01   10   --------------------------------------------------------------------......----------------  15

                                      -->                                  
                                       T  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13235  271  ACGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (34/34)   IGHJ4*02     15   ---..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_5745

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           305     3e-85
IGHD3-3*01                                                                                            14.1    8.1  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TGC	GGAGTGG	ACTTATG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGCGGAGTGGACTTATGGACTCC	ARLRSGLMDS	246	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	14	7	0	66.7
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	222	27	0	89.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  D  S  I  N  I  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  N  G  
                    Query_13236  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCAACATTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCGGGGAACGGAC  93
V  89.2% (222/249)  IGHV4-39*01  50   .....TCC...A..................G........G..G..G.................................A.....G..G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  L  G  S  V  S  N  S  G  N  T  Y  Y  N  P  S  L  K  R  R  V  T  V  S  V  D  T  S  
                    Query_13236  94   TGGAGTGGCTTGGGAGTGTCTCGAACAGTGGTAACACCTACTACAACCCGTCCCTCAAGCGTCGGGTCACCGTATCCGTAGACACGTCCA  183
V  89.2% (222/249)  IGHV4-39*01  140  ........A........A...ATT.T.....G.G.........................A....A......A..................  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      N  H  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  R  S  G  L  M  D  
                    Query_13236  184  ATCATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTTCTGTGCGAGACTGCGGAGTGGACTTATGGACT  273
V  89.2% (222/249)  IGHV4-39*01  230  .GA.C.............A......................................A...........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-3*01   15   ------------------------------------------------------------------------.......-----------  21
J  97.5% (39/40)    IGHJ4*02     9    --------------------------------------------------------------------------------------....  12

                                      ->                                  
                                      S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13236  274  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.5% (39/40)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_5744

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           357     1e-100
IGHD3-3*01                                                                                            21.8    0.041 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGCCTCGTGCCTG	GGAGTGGTTAT	GAAGCCATACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGCCTCGTGCCTGGGAGTGGTTATGAAGCCATACCTGACTAC	AKSLVPGSGYEAIPDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_13237  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCCTTAGCAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-23*01  47   ......................................T..................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  D  T  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13237  91   AATGGGTCTCAGGTATTAGTGGTAGTGGTGGTGACACATACTACGCAGACGCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.0% (238/248)  IGHV3-23*01  137  .G..........C...................AG................T.......................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  F  C  A  K  S  L  V  P  G  S  G  
                    Query_13237  181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTATATTTCTGTGCGAAAAGCCTCGTGCCTGGGAGTGGTT  270
V  96.0% (238/248)  IGHV3-23*01  227  ...A................................C....................A..........----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (11/11)   IGHD3-3*01   15   ---------------------------------------------------------------------------------.........  23

                                      T------------------>                                
                                      Y  E  A  I  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13237  271  ATGAAGCCATACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  322
D  100.0% (11/11)   IGHD3-3*01   24   ..--------------------------------------------------  25
J  100.0% (39/39)   IGHJ4*02     8    -------------.......................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_5747

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           300     8e-84
IGHD3-10*01                                                                                           12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGGTGAGGGGG	CGGGGGGCTATT	TGGTGGGGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGGTGAGGGGGCGGGGGGCTATTTGGTGGGGTTACTTTGTCTGC	ARVRGRGAIWWGYFVC	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	219	27	0	89


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  R  V  S  G  G  S  F  S  S  S  N  F  Y  W  G  W  L  R  Q  A  P  G  K  G 
                    Query_13238  1    ACCCTGTCCCTCACCTGCAGGGTCTCTGGTGGCTCCTTCAGCAGTAGTAACTTCTACTGGGGCTGGCTCCGCCAGGCCCCAGGGAAGGGA  90
V  89.0% (219/246)  IGHV4-39*01  49   ...................CT...............A............GT.A.............A........C.............G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  W  D  S  G  R  T  N  Y  N  T  S  L  K  G  R  V  T  I  S  G  D  T  S 
                    Query_13238  91   CTAGAGTGGATTGGGAATATCTGGGATAGTGGGAGGACTAACTACAACACGTCCCTCAAGGGCCGAGTCACCATCTCCGGAGACACGTCA  180
V  89.0% (219/246)  IGHV4-39*01  139  ..G.............G.....ATT..........C..CT........C...........A.T...........A....T.........C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  W  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  G  R  G  A  I 
                    Query_13238  181  AAGAACCAGTTCTCCCTGAAGTTGAGCTGGGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGCGGGTGAGGGGGCGGGGGGCTATT  270
V  89.0% (219/246)  IGHV4-39*01  229  .....................C......CT.......................G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  83.3% (10/12)    IGHD3-10*01  15   ------------------------------------------------------------------------------.....A.T....  26

                                      GT------------------>                                  
                                       W  W  G  Y  F  V  C  G  G  Q  G  T  L  V  A  V  S  S  
                    Query_13238  271  TGGTGGGGTTACTTTGTCTGCGGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  325
J  91.3% (42/46)    IGHJ4*02     3    ---------.......A..A.T....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_5746

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           290     2e-80
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	TCTACAGTGCGGGGCGC	TGGCTGGT	GGCCGGTTGGGTACAT	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	22	2	0	91.7
FR2-IMGT	41	91	51	48	3	0	94.1
CDR2-IMGT	92	115	24	19	5	0	79.2
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	235	6	5	1	0	83.3
Total	N/A	N/A	223	204	19	0	91.5


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  F  S  T  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  H  I  Y  Y  D
                    Query_13239  13   GTCTGGATTCACCTTCAGTACCTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGCCTGGAGTGGGTGGCACATATTTACTATGA  102
V  91.5% (204/223)  IGHV3-33*01  72   ....................G..A....................................G...............GT...A.GG.....  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  T  N  K  Y  Y  A  D  S  M  K  G  R  F  T  I  S  R  D  N  S  R  D  T  L  Y  L  Q  M  N
                    Query_13239  103  TGGAACTAATAAGTATTATGCAGACTCCATGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGGATACCCTGTATCTGCAAATGAA  192
V  91.5% (204/223)  IGHV3-33*01  162  .....G......A..C............G....................................A.A.C..G.................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------>                                                     
                                        S  L  R  V  E  D  T  A  M  Y  Y  C  V  R  S  T  V  R  G  A  G  W  W  P  V  G  Y  M  G  Q
                    Query_13239  193  CAGCCTGAGAGTCGAGGACACGGCTATGTATTACTGTGTGAGATCTACAGTGCGGGGCGCTGGCTGGTGGCCGGTTGGGTACATGGGCCA  282
V  91.5% (204/223)  IGHV3-33*01  252  ...........C.............G............C....-----------------------------------------------  294
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (8/8)     IGHD6-19*01  12   ------------------------------------------------------------........----------------------  19
J  100.0% (27/27)   IGHJ4*02     17   ------------------------------------------------------------------------------------......  22

                                                           
                                        G  T  L  V  T  V  S
                    Query_13239  283  GGGAACCCTGGTCACCGTCTC  303
J  100.0% (27/27)   IGHJ4*02     23   .....................  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_5741

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            322     2e-90
IGHD3-9*01                                                                                            16.1    2.3  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CAAGAGCGGTACGCATTGAT	ACTGTTTATTA	CGAGGGGCCTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAAGAGCGGTACGCATTGATACTGTTTATTACGAGGGGCCTCCTGACTAC	ATRAVRIDTVYYEGPPDY	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  N  S  N  W  W  T  W  I  R  Q  P  P  G  K  G  L 
                    Query_13240  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGTCCATCAGTAATAGTAACTGGTGGACTTGGATTCGCCAGCCCCCAGGAAAGGGGCTG  90
V  92.2% (225/244)  IGHV4-4*01   49   ................................C........C.G..............G....G.C..............G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  I  D  S  G  S  T  N  Y  N  P  S  L  M  S  R  V  I  I  S  L  D  K  S  K 
                    Query_13240  91   GAGTGGATTGGGGAAATTATTGATAGTGGGAGCACCAACTACAACCCGTCCCTCATGAGTCGAGTCATCATCTCACTAGACAAGTCCAAG  180
V  92.2% (225/244)  IGHV4-4*01   139  .................CTA.C.................................A...........C...A...G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                       N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  T  R  A  V  R  I  D  T  V 
                    Query_13240  181  AATCAGTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGACAAGAGCGGTACGCATTGATACTGTT  270
V  92.2% (225/244)  IGHV4-4*01   229  ..C..............G....G................................G........--------------------------  292
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  90.9% (10/11)    IGHD3-9*01   17   ------------------------------------------------------------------------------------....G.  22

                                      GT--------------------->                                  
                                       Y  Y  E  G  P  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13240  271  TATTACGAGGGGCCTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  328
D  90.9% (10/11)    IGHD3-9*01   23   .....-----------------------------------------------------  27
J  100.0% (41/41)   IGHJ4*02     8    -----------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_5740

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           46.8    1e-09
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTGCTTCAGAC	TACTATGGTTCGGGGAGTTATTAT	N/A	TACAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTGCTTCAGACTACTATGGTTCGGGGAGTTATTATTACATTGACTAC	ARVASDYYGSGSYYYIDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	232	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  N  R  Y  Y  W  G  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13241  1    ACCCTGTCCCTCACCTGCTCCGTCTCTGGTGACTCCATCAATAGATACTACTGGGGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  95.1% (232/244)  IGHV4-59*01  49   ..................A.T..........G........G...T.........A..............C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  H  S  G  T  T  N  Y  N  P  A  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13241  91   TGGATTGGGTATATTTATCACAGTGGGACCACCAACTACAACCCCGCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.1% (232/244)  IGHV4-59*01  139  ..............C...T.........G................T............................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  A  S  D  Y  Y  G  S  G 
                    Query_13241  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTTGCTTCAGACTACTATGGTTCGGGG  270
V  95.1% (232/244)  IGHV4-59*01  229  ...................G............................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (24/24)   IGHD3-10*01  5    ---------------------------------------------------------------------------...............  19

                                      -------------------->                                  
                                       S  Y  Y  Y  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13241  271  AGTTATTATTACATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  100.0% (24/24)   IGHD3-10*01  20   .........----------------------------------------------  28
J  97.8% (45/46)    IGHJ4*02     3    ---------...T..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_5743

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           315     5e-88
IGHD3-22*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TCCGTGCA	TATTACTTTGATAGGAGT	CCCCGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCCGTGCATATTACTTTGATAGGAGTCCCCGGGACTAC	VRAYYFDRSPRDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  S  S  D  F  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13242  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTCCAGTGACTTTAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  91.4% (222/243)  IGHV3-21*01  47   ....................G..................T....AG..A....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  S  S  G  T  Y  I  Y  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  A  
                    Query_13242  91   AGTGGGTCTCATCCATAACTAGTAGTGGTACTTACATATACTACGCAGACTCAGTGACGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  91.4% (222/243)  IGHV3-21*01  137  ................T.G.......A...G..........................A......A.........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      R  N  S  M  S  L  Q  M  N  S  L  T  V  D  D  T  A  I  Y  Y  C  V  R  A  Y  Y  F  D  R  S  
                    Query_13242  181  GGAACTCTATGTCTCTGCAAATGAACAGCCTGACAGTCGACGACACGGCTATCTATTACTGTGTCCGTGCATATTACTTTGATAGGAGTC  270
V  91.4% (222/243)  IGHV3-21*01  227  A......AC...A....................G..C...G.........G.G..........---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  88.9% (16/18)    IGHD3-22*01  2    -----------------------------------------------------------------------.......A......T...-  19

                                      ---------->                                  
                                      P  R  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13242  271  CCCGGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (40/40)   IGHJ4*02     9    -----........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_5742

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           290     2e-80
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GTCGAGGGGG	ATTACTCTGATAGTGCCGGTTATTAC	CATGCAGTT	GACCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGTCGAGGGGGATTACTCTGATAGTGCCGGTTATTACCATGCAGTTGACCTC	AVEGDYSDSAGYYHAVDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	15	9	0	62.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	215	30	0	87.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  A  F  L  D  S  E  W  N  W  F  R  H  A  P  G  K  G  L  
                    Query_13243  1    GGTCCCTGAGACTCTCCTGTGCTGCCTCCGGACTCGCATTTCTTGATTCTGAATGGAATTGGTTCCGCCACGCTCCAGGGAAGGGGCTGG  90
V  87.8% (215/245)  IGHV3-48*03  47   ......................A.....T...T..A.C..CAG.AG..A....AT...C...G.......G...................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  R  T  G  T  S  T  Y  Y  T  D  S  V  K  G  R  F  S  I  S  R  D  D  A  
                    Query_13243  91   AGTGGATTTCATACATCAGTAGGACAGGGACCAGCACATACTACACAGACTCTGTGAAGGGCCGATTCTCCATCTCCAGAGACGACGCCA  180
V  87.8% (215/245)  IGHV3-48*03  137  .....G..........T.....T.GT..T.GT.C..T.......G.......................A..............A......  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  V  E  G  D  Y  S  D  S  
                    Query_13243  181  AGAAGTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGGTCGAGGGGGATTACTCTGATAGTG  270
V  87.8% (215/245)  IGHV3-48*03  227  ....C............................................................-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  84.6% (22/26)    IGHD3-22*01  3    ---------------------------------------------------------------------------......A.......A  17

                                      IMGT--------------------->                                  
                                      A  G  Y  Y  H  A  V  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13243  271  CCGGTTATTACCATGCAGTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
D  84.6% (22/26)    IGHD3-22*01  18   GT.........-------------------------------------------------  28
J  97.5% (39/40)    IGHJ5*02     12   --------------------....C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_139127

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GGGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGGGGGCTGGCTCGACCGC	ARSGSGNYGGWLDR	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	228	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  R  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13244  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGCGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  94.2% (228/242)  IGHV4-59*01  49   ..........................................AG..........A...................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13244  91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  94.2% (228/242)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  L  S  L  R  L  S  F  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  G  G  W 
                    Query_13244  181  CAGCTCTCCCTGAGGCTGAGTTTTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGGGGGCTGG  270
V  94.2% (228/242)  IGHV4-59*01  229  ...T.........A......C.C.......G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  95.7% (45/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  R  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13244  271  CTCGACCGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  95.7% (45/47)    IGHJ5*02     9    T......C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_139125

Length=411
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           433     1e-123
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGCCTACTTTCTTAGTTGGGGTTACTCTGGTA	GTATAACAGCAGCTGG	CGAGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTAC	ARHAYFLSWGYSGSITAAGEIDY	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	284	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  A  T  Y
                    Query_13245  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTGCCACCTA  90
V  97.6% (284/291)  IGHV5-51*01  6    ....................................C........................................G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  G  Y  S  P
                    Query_13245  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCGGATACAGCCC  180
V  97.6% (284/291)  IGHV5-51*01  96   ............................................................................A..A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_13245  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  97.6% (284/291)  IGHV5-51*01  186  .........................................................................A................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        M  Y  Y  C  A  R  H  A  Y  F  L  S  W  G  Y  S  G  S  I  T  A  A  G  E  I  D  Y  W  G  Q
                    Query_13245  271  CATGTATTACTGTGCGAGACATGCCTACTTTCTTAGTTGGGGTTACTCTGGTAGTATAACAGCAGCTGGCGAGATTGACTACTGGGGCCA  360
V  97.6% (284/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  93.8% (15/16)    IGHD6-13*01  3    -----------------------------------------------------.....G..........---------------------  18
J  100.0% (42/42)   IGHJ4*02     7    --------------------------------------------------------------------------................  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_13245  361  GGGAACCCTGGTCACCGTCTCCTCAG  386
J  100.0% (42/42)   IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40288536


Query= Query_139124

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           355     3e-100
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCT	TTACTATGATAGTAGTGCTTA	CTATGCCTCTTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCTTTACTATGATAGTAGTGCTTACTATGCCTCTTTCTACGTTCTGGACGTC	ARELYYDSSAYYASFYVLDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	239	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  T  V  S  L  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_13246  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCACCGTCAGTCTTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  95.2% (239/251)  IGHV4-61*01  49   .................................T.......CAG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  V  Y  F  N  G  N  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_13246  91   CTGGAGTGGATTGGGTATGTCTATTTCAATGGGAACACCAATTACAACCCCTCCCTCAAGAGTCGACTCACCATATCAGTAGACACGTCC  180
V  95.2% (239/251)  IGHV4-61*01  139  ..................A......A..G.....G......C........................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  L  Y  Y  D  S  S 
                    Query_13246  181  AAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGAGCTTTACTATGATAGTAGT  270
V  95.2% (239/251)  IGHV4-61*01  229  .....................C...............................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.2% (20/21)    IGHD3-22*01  4    --------------------------------------------------------------------------................  19

                                      DR3-IMGT------------------------>                                 
                                       A  Y  Y  A  S  F  Y  V  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13246  271  GCTTACTATGCCTCTTTCTACGTTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  336
D  95.2% (20/21)    IGHD3-22*01  20   .G...-------------------------------------------------------------  24
J  95.9% (47/49)    IGHJ6*02     14   -----------------.....G.A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_5749

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           380     1e-107
IGHD6-25*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD6-25*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACAGTCACCGGCTTCACTGGT	CGGCTAC	CAA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACAGTCACCGGCTTCACTGGTCGGCTACCAAGACTAC	ARVQSPASLVGYQDY	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	71	4	0	94.7
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	99	15	0	86.8
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	269	26	0	91.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_13247  2    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCGGGAGGCACCTTCAGC  91
V  91.2% (269/295)  IGHV1-69*12  1    ...........G...........G..........A.......................................T...............  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  F  M  P  I  F  G  A  A  D  Y 
                    Query_13247  92   AACTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGTTCATGCCTATCTTTGGTGCAGCGGACTAC  181
V  91.2% (269/295)  IGHV1-69*12  91   .G.....C.................................G..................A....C............A....AA.....  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  D  R  A  T  I  T  A  D  E  S  T  G  T  S  Y  M  E  L  R  N  L  K  S  E  D 
                    Query_13247  182  GCCCAGAAGTTCCAAGACAGAGCCACCATTACCGCGGACGAATCCACGGGCACATCCTATATGGAACTGAGGAACCTGAAATCTGAAGAC  271
V  91.2% (269/295)  IGHV1-69*12  181  ..A...........G.G.....T...G.....................A.....G....C.....G.....C.G.....G......G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  R  V  Q  S  P  A  S  L  V  G  Y  Q  D  Y  W  G  Q  G  T  L  V  T  V 
                    Query_13247  272  ACGGCCGTATATTACTGTGCGAGAGTACAGTCACCGGCTTCACTGGTCGGCTACCAAGACTACTGGGGCCAGGGAACCCTGGTCACCGTC  361
V  91.2% (269/295)  IGHV1-69*12  271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (7/7)     IGHD6-25*01  12   -----------------------------------------------.......------------------------------------  18
J  100.0% (40/40)   IGHJ4*02     9    ---------------------------------------------------------.................................  41

                                             
                                       S  S  
                    Query_13247  362  TCCTCAG  368
J  100.0% (40/40)   IGHJ4*02     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_139121

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            392     2e-111
IGHD2-15*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ACTTAGGGCGAGGGGTC	GTGGTGGTAGC	CCTACCTGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAACTTAGGGCGAGGGGTCGTGGTGGTAGCCCTACCTGGTACTTTGACTAC	ARELRARGRGGSPTWYFDY	269	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	76	30	28	2	0	93.3
FR2-IMGT	77	127	51	50	1	0	98
CDR2-IMGT	128	154	27	25	2	0	92.6
FR3-IMGT	155	268	114	110	4	0	96.5
CDR3-IMGT (germline)	269	276	8	8	0	0	100
Total	N/A	N/A	275	263	12	0	95.6


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  Y  S  A  A  W  N  W  I  R 
                    Query_13248  2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGCGACAGTGTCTCTAGCTACAGTGCTGCTTGGAACTGGATCAGG  91
V  95.6% (263/275)  IGHV6-1*01   31   ........G...T.G................................G...............A..........................  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  S  R  S  K  W  Y  T  D  Y  A  V  S  V  K  S  R 
                    Query_13248  92   CAGTCGCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTCCAGGTCCAAGTGGTATACTGATTATGCAGTCTCTGTGAAGAGTCGA  181
V  95.6% (263/275)  IGHV6-1*01   121  .....C.....................................A.................A............A........A......  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       M  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_13248  182  ATGACCATCAACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGCGCA  271
V  95.6% (263/275)  IGHV6-1*01   211  ..A...................................................................................T...  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      ---------------------CDR3-IMGT----------------------->                                  
                                       R  E  L  R  A  R  G  R  G  G  S  P  T  W  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13248  272  AGAGAACTTAGGGCGAGGGGTCGTGGTGGTAGCCCTACCTGGTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  95.6% (263/275)  IGHV6-1*01   301  .....-----------------------------------------------------------------------------------  305
                                       R                                                                                      
D  100.0% (11/11)   IGHD2-15*01  12   ----------------------...........-------------------------------------------------------  22
J  100.0% (46/46)   IGHJ4*02     3    ------------------------------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_139120

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           341     6e-96
IGHD3-22*01                                                                                           19.9    0.17 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ATCCT	GTACTACTATGAT	CGTGACGGTCGTATCCCCGGAGCGGGTTTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCAGAATCCTGTACTACTATGATCGTGACGGTCGTATCCCCGGAGCGGGTTTTTTTGACTAC	TRILYYYDRDGRIPGAGFFDY	249	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	236	18	0	92.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  V  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13249  1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGACTATGCTGTGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGACTGG  90
V  92.9% (236/254)  IGHV3-49*04  47   ..............................................T......A.............C.................G....  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  I  A  Y  I  R  S  K  G  Y  G  G  T  A  D  H  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_13249  91   AGTGGATTGCTTACATTAGAAGTAAAGGTTATGGTGGGACAGCAGACCACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  92.9% (236/254)  IGHV3-49*04  137  .....G.A.G..T.........C....C.............A....AT..........................................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  K  S  T  A  Y  L  Q  M  N  S  L  K  I  E  D  T  G  V  Y  Y  C  T  R  I  L  Y  Y  Y  
                    Query_13249  181  ATTCCAAAAGCACCGCCTATCTGCAAATGAACAGCCTGAAAATCGAGGACACAGGCGTCTATTACTGTACCAGAATCCTGTACTACTATG  270
V  92.9% (236/254)  IGHV3-49*04  227  ............T.............................C...........C...G...........T...----------------  300
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  92.3% (12/13)    IGHD3-22*01  1    -------------------------------------------------------------------------------...T.......  11

                                      -----CDR3-IMGT-------------------------->                                  
                                      D  R  D  G  R  I  P  G  A  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13249  271  ATCGTGACGGTCGTATCCCCGGAGCGGGTTTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  345
D  92.3% (12/13)    IGHD3-22*01  12   ..-------------------------------------------------------------------------  13
J  100.0% (43/43)   IGHJ4*02     6    --------------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_341053

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGTTGGCCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGTTGGCCGGACCAAGTACGGTATGGACGTC	VRQSSVGRTKYGMDV	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	106	8	0	93
CDR3-IMGT (germline)	289	296	8	7	1	0	87.5
Total	N/A	N/A	295	275	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  
                    Query_13250  2    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCA  91
V  93.2% (275/295)  IGHV5-51*01  2    ....G........G..........................C.......................................AG........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  T  G  L  E  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  
                    Query_13250  92   GTTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGTGGATGGGTATCATCTTTCCGGATGACTCTGATACCAGATACA  181
V  93.2% (275/295)  IGHV5-51*01  92   .C..................................A..................G.......A...T.G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  G  L  K  A  S  D  
                    Query_13250  182  GCCCGTCCTTCCAAGGCCAGGTAACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGTGGCCTGAAGGCCTCGGACA  271
V  93.2% (275/295)  IGHV5-51*01  182  ......................C.........................G.....................CA..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                           
                                      T  A  N  Y  Y  C  V  R  Q  S  S  V  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_13250  272  CCGCGAATTATTATTGTGTGAGACAATCAAGCGTTGGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  360
V  93.2% (275/295)  IGHV5-51*01  272  ....C.TG.....C....C......----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                   
J  100.0% (42/42)   IGHJ6*02     15   -----------------------------------------------..........................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_341050

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*14                                                                                           434     4e-124
IGHD1-26*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*14	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCG	AGTGGGAGCTACT	TGGGGCA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTAC	ARDLEWELLGAFDY	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	74	1	0	98.7
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	287	9	0	97


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_13251  1    CAGGTCCAGCTGGTACAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  90
V  97.0% (287/296)  IGHV1-69*14  1    ..............G...........................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  S  F  G  T  A  H  Y 
                    Query_13251  91   AGATATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTAGCTTTGGAACAGCACACTAC  180
V  97.0% (287/296)  IGHV1-69*14  91   ..C...................................................................T......T......A.....  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  R  F  Q  G  R  V  T  I  T  A  D  R  S  T  S  T  A  Y  M  E  L  S  S  L  S  S  E  D 
                    Query_13251  181  GCACAGAGATTCCAGGGCAGAGTCACGATTACCGCGGACAGATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGCTCTGAGGAC  270
V  97.0% (287/296)  IGHV1-69*14  181  .......AG...............................A.......................................A.........  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  R  D  L  E  W  E  L  L  G  A  F  D  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_13251  271  ACGGCCGTGTATTACTGTGCGAGAGATCTCGAGTGGGAGCTACTTGGGGCATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCC  360
V  97.0% (287/296)  IGHV1-69*14  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (13/13)   IGHD1-26*01  6    -------------------------------.............----------------------------------------------  18
J  100.0% (43/43)   IGHJ4*02     6    ---------------------------------------------------.......................................  44

                                          
                                       S  
                    Query_13251  361  TCAG  364
J  100.0% (43/43)   IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_341051

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATGGGACAC	TGTAGTAGTGCCATCTGCGATG	GACC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTAC	ARHMGHCSSAICDGPDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  Q  K  P  G  E  A  L  K  I  S  C  K  G  S  G  Y  S  F  G  S  Y
                    Query_13252  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGCAAAAGCCGGGGGAGGCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTGGCAGTTA  90
V  96.2% (280/291)  IGHV5-51*01  6    ............................A.......C......T......................................AC...C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_13252  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  96.2% (280/291)  IGHV5-51*01  96   ........G.................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  P  A
                    Query_13252  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCTATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACCCCGC  270
V  96.2% (280/291)  IGHV5-51*01  186  .............................C.........C.................................A...........A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  M  G  H  C  S  S  A  I  C  D  G  P  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_13252  271  CATGTATTACTGTGCGAGACATATGGGACACTGTAGTAGTGCCATCTGCGATGGACCTGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  96.2% (280/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  86.4% (19/22)    IGHD2-2*01   8    -------------------------------.........A...G....T...-------------------------------------  29
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_13252  361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_341056

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	CAGCAGCTGG	AATGGGGTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACAGCAGCTGGAATGGGGTGGACTACTTTGACTAC	RETAAGMGWTTLTT	237	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	101	51	49	1	1	96.1
CDR2-IMGT	102	122	21	19	2	0	90.5
FR3-IMGT	123	236	114	111	3	0	97.4
CDR3-IMGT (germline)	237	244	8	7	1	0	87.5
Total	N/A	N/A	245	236	8	1	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P   Q  G  R  D  W  S
                    Query_13253  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCC-AGGGAAGGGACTGGAG  89
V  96.3% (236/245)  IGHV4-59*01  49   ........................................G................................C................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                        G  L  V  M  S  I  T  V  G  A  P  T  T  T  P  P  S  R  V  E  S  P  Y  Q  *  T  G  P  R  T
                    Query_13253  90   TGGATTGGTTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  179
V  96.3% (236/245)  IGHV4-59*01  139  ........G...A..T...............................................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                        S  S  P  *  R  *  G  L  *  P  L  R  T  R  P  C  I  T  V  R  E  T  A  A  G  M  G  W  T  T
                    Query_13253  180  CAGTTCTCCCTGAAGGTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGCGAGACAGCAGCTGGAATGGGGTGGACTAC  269
V  96.3% (236/245)  IGHV4-59*01  229  ...............C....C.......................................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-13*01  9    -----------------------------------------------------------------..........---------------  18
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                        L  T  T  G  A  R  E  P  W  S  P  S  P  Q 
                    Query_13253  270  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_341057

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           327     8e-92
IGHD6-19*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AACTCCC	TATAGCAGT	CCATACAATG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAACTCCCTATAGCAGTCCATACAATGAC	ATPYSSPYND	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	245	2	2	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  P  M  S  S  R  R  H  Y  *  G  W  I  R  Q  P  P  G  K  G 
                    Query_13254  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCCCCATGAGCAGTCGTCGTCACTACTAGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  92.7% (227/245)  IGHV4-39*01  49   .................................T....C......A..A..T......G..............................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  S  S  L  Q  S  R  V  T  I  S  V  D  S  S 
                    Query_13254  91   CTGGAGTGGATTGGGAGCATCTATCACAGCGGGAGCACATACTACAATTCGTCCCTCCAGAGTCGAGTCACCATATCCGTAGACTCGTCC  180
V  92.7% (227/245)  IGHV4-39*01  139  .................T......T.T..T........C........CC........A..........................A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  P  Y  S  S  P  Y  N 
                    Query_13254  181  AAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCAACTCCCTATAGCAGTCCATACAAT  270
V  92.7% (227/245)  IGHV4-39*01  229  ...................A.....G.......................................-------------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (9/9)     IGHD6-19*01  4    ------------------------------------------------------------------------.........---------  12

                                      -->                                  
                                       D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13254  271  GACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (36/36)   IGHJ4*02     13   -....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_341054

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_13255  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  95.9% (279/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_13255  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_13255  181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  .......C.....................................C...........G......A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_13255  271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  95.9% (279/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        T  V  S  S 
                    Query_13255  361  CACCGTCTCCTCA  373
J  98.2% (56/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_341055

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           308     4e-86
IGHD4-17*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGTAGGG	ACGGTGACTAC	GGGGCGGGGCTTGAACAA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCGTAGGGACGGTGACTACGGGGCGGGGCTTGAACAA	ARERRDGDYGAGLEQ	230	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	20	4	0	83.3
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	23	1	0	95.8
FR3-IMGT	116	229	114	106	8	0	93
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	211	14	0	93.8


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  L  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  W  Y  D
                    Query_13256  13   GTCTGGATTCACCTTAAGTTCCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGTCAGTTATATGGTATGA  102
V  93.8% (211/225)  IGHV3-33*01  72   ...............C...AG.....G..............................................G................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  I  N  K  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  E  S  R  N  T  M  H  L  Q  M  N
                    Query_13256  103  TGGAATTAATAAATACTATGCAGACGCCGTGAAGGGCCGATTCACCATCTCCAGAGACGAATCCAGGAACACGATGCATCTGCAAATGAA  192
V  93.8% (211/225)  IGHV3-33*01  162  .....G...................T................................A.T....A.......C..T.............  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------CDR3-IMGT----------------->        
                                        S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  R  R  D  G  D  Y  G  A  G  L  E  Q  W  G  Q
                    Query_13256  193  CAGCCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGCGAGAGAGCGTAGGGACGGTGACTACGGGGCGGGGCTTGAACAATGGGGCCA  282
V  93.8% (211/225)  IGHV3-33*01  252  .........................G.G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (11/11)   IGHD4-17*01  6    -----------------------------------------------------...........--------------------------  16
J  100.0% (34/34)   IGHJ4*02     15   ----------------------------------------------------------------------------------........  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_13256  283  GGGAACCCTGGTCACCGTCTCCTCAG  308
J  100.0% (34/34)   IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_349265

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD3-16*01                                                                                           12.2    36    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACACTTCTCCCCGGGTCCCCC	TGGGGG	CC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACACTTCTCCCCGGGTCCCCCTGGGGGCCCTTTGACTCT	ARTLLPGSPWGPFDS	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	68	6	0	91.9
CDR1-IMGT	79	102	24	18	6	0	75
FR2-IMGT	103	153	51	50	1	0	98
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	103	11	0	90.4
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	269	24	0	91.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  A  V  R  R  P  G  E  S  L  T  I  S  C  Q  G  S  G  Y  R  V  P  
                    Query_13257  5    AGGTGCAGCTGGTGCAGTCTGGAGCAGCGGTGAGAAGGCCCGGGGAGTCTCTGACGATTTCCTGTCAGGGTTCTGGATACAGAGTTCCCA  94
V  91.8% (269/293)  IGHV5-51*01  2    ...........................A.....A..A.................A...C......A................CT..A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  H  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_13257  95   CCCATTGGATCGGGTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACA  184
V  91.8% (269/293)  IGHV5-51*01  92   G.T.C........C......................................................................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  V  N  T  A  Y  L  Q  W  S  S  L  K  A  P  D  
                    Query_13257  185  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCTGTCGACAAGTCCGTCAACACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCCCGGACC  274
V  91.8% (269/293)  IGHV5-51*01  182  ...............................A.C..........A...G........................C.........T.....A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      P  A  T  Y  F  C  A  R  T  L  L  P  G  S  P  W  G  P  F  D  S  W  G  Q  G  T  L  V  T  V  
                    Query_13257  275  CCGCCACATATTTCTGTGCGAGAACACTTCTCCCCGGGTCCCCCTGGGGGCCCTTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCT  364
V  91.8% (269/293)  IGHV5-51*01  272  ......TG....A..........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (6/6)     IGHD3-16*01  17   --------------------------------------------......----------------------------------------  22
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------........AC............................  42

                                            
                                      S  S  
                    Query_13257  365  CCTCAG  370
J  95.5% (42/44)    IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_349264

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           422     2e-120
IGHD5-12*01                                                                                           10.3    134   
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	GTGGC	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGGCAACTACAACTACTACACTATGGACGTC	ARRGNYNYYTMDV	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  H
                    Query_13258  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCCA  90
V  96.6% (280/290)  IGHV5-51*01  6    ........................................................................................T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  R  Y  S  P
                    Query_13258  91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAGATACAGCCC  180
V  96.6% (280/290)  IGHV5-51*01  96   C.......G........................................................G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        P  F  Q  G  Q  V  T  M  S  V  D  K  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13258  181  GCCCTTCCAAGGCCAGGTCACCATGTCAGTCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.6% (280/290)  IGHV5-51*01  186  .T......................C....C.......................A....................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                 
                                        S  Y  Y  C  A  R  R  G  N  Y  N  Y  Y  T  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13258  271  CAGCTATTACTGTGCGAGACGTGGCAACTACAACTACTACACTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  355
V  96.6% (280/290)  IGHV5-51*01  276  ..TG................-----------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD5-12*01  10   --------------------.....------------------------------------------------------------  14
J  94.9% (56/59)    IGHJ6*02     4    --------------------------.....T........GG...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_349267

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           364     5e-103
IGHD3-16*01                                                                                           12.2    35    
IGHJ6*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCC	TTGGGG	CGGC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCTTGGGGCGGCCTACGGTTTGAACGTC	ARPLGAAYGLNV	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	261	28	0	90.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  D  S  L  T  I  S  C  Q  V  S  G  Y  I  F  T  H  Y
                    Query_13259  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCGGGGGACTCTCTGACGATCTCCTGTCAGGTTTCTGGATACATCTTCACCCACTA  90
V  90.3% (261/289)  IGHV5-51*03  6    ...............................A..........G.......A..........A...G...........G...T...AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  V  A  G  K  G  L  E  W  M  G  V  I  Y  P  D  D  S  D  A  R  Y  S  P
                    Query_13259  91   TTGGATCGCCTGGGTGCGCCAGGTGGCCGGCAAAGGCCTAGAGTGGATGGGGGTCATCTATCCTGACGACTCTGATGCCAGATACAGCCC  180
V  90.3% (261/289)  IGHV5-51*03  96   C.......G.............A..C....G........G............A............GT.........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  L  V  T  I  S  V  D  K  S  L  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13259  181  GTCCTTTCAAGGCCTGGTCACCATCTCAGTCGACAAGTCCCTCAGTACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  90.3% (261/289)  IGHV5-51*03  186  ......C.......A..............C..........A....C....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  F  C  A  R  P  L  G  A  A  Y  G  L  N  V  W  G  Q  G  T  A  V  V  V  S  S 
                    Query_13259  271  CATTTACTTCTGTGCGAGACCCCTTGGGGCGGCCTACGGTTTGAACGTCTGGGGCCAAGGGACCGCGGTCGTCGTCTCGTCA  352
V  90.3% (261/289)  IGHV5-51*03  276  ...G..T.A..........---------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                
D  100.0% (6/6)     IGHD3-16*01  16   -----------------------......-----------------------------------------------------  21
J  87.8% (43/49)    IGHJ6*02     14   ---------------------------------.......A..G....................A.....AC......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_341059

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     7e-91
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TCTAGATGGCCCCAAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTAGATGGCCCCAATTACTACTACGGGATGCACGTC	ARDLDGPNYYYGMHV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  G  S  L  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13260  1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCTCCCTCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTGGAA  90
V  92.2% (226/245)  IGHV4-59*01  49   ...................C................A..............................................A.....G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  F  S  G  N  T  N  Y  N  P  S  L  K  G  R  V  N  I  S  G  D  T  S  Q  N 
                    Query_13260  91   TGGATTGGCTATATTCATTTCAGTGGAAACACCAACTACAACCCCTCCCTCAAGGGTCGGGTCAACATATCAGGAGACACGTCCCAGAAC  180
V  92.2% (226/245)  IGHV4-59*01  139  ........G.....CT...A......G.G.........................A....A....C........T..........A.....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  D  G  P  N  Y  Y  Y 
                    Query_13260  181  CAGTTCTCCCTGAAGGTGAACTCTGTTACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGATCTAGATGGCCCCAATTACTACTAC  270
V  92.2% (226/245)  IGHV4-59*01  229  ...............C...G......G..........................C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.6% (48/53)    IGHJ6*02     9    ---------------------------------------------------------------------------------.........  17

                                      ----------->                                
                                       G  M  H  V  W  G  P  G  T  A  V  I  V  S  S
                    Query_13260  271  GGGATGCACGTCTGGGGCCCAGGGACCGCGGTCATCGTCTCCTC  314
J  90.6% (48/53)    IGHJ6*02     18   ..T...G............A.......A......C.........  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_349261

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            350     8e-99
IGHD1-26*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TAGTGGG	GACT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGTGGGGACTACTACTTTGACCAC	ARDSGDYYFDH	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  S  Y  W  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_13261  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAGTAGTTATTGGATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-7*01   47   ....................................C.........C.........A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  R  Q  D  G  N  E  I  Y  Y  G  D  S  A  R  G  R  F  T  I  S  R  D  N  A  
                    Query_13261  91   AGTGGGTGGCCAACATAAGGCAAGATGGAAATGAGATATACTATGGGGACTCTGCAAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (237/250)  IGHV3-7*01   137  ..................A...........G.....A........T........TG.A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  S  L  F  L  Q  L  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  S  G  D  Y  Y  F  
                    Query_13261  181  AGAACTCACTGTTTCTGCAACTGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGAGATAGTGGGGACTACTACTTTG  270
V  94.8% (237/250)  IGHV3-7*01   227  ............A.......A.....................................C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  5    ----------------------------------------------------------------------.......-------------  11
J  97.9% (47/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------.........  9

                                      ---->                                  
                                      D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13261  271  ACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.9% (47/48)    IGHJ4*02     10   ..T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_349260

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           327     9e-92
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	AGCT	CGATTTTTGGACTGGTTATT	TTAGGTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAAGCTCGATTTTTGGACTGGTTATTTTAGGTAACTTTGACTAC	AGSSIFGLVILGNFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  A  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_13262  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTAGCAGTGCTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGG  90
V  92.0% (229/249)  IGHV4-39*01  49   .............................T...........C..T...AG.........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  N  T  Y  Y  N  P  S  L  R  S  R  L  H  M  S  V  D  T  S 
                    Query_13262  91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAACACCTACTATAATCCGTCCCTCAGGAGTCGACTCCACATGTCCGTAGACACTTCT  180
V  92.0% (229/249)  IGHV4-39*01  139  ..................................G.........C..C..........A.......G..AC...A...........G..C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  I  F  G  L  V 
                    Query_13262  181  AAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCAGACACGGCTGTTTATTACTGTGCGGGAAGCTCGATTTTTGGACTGGTT  270
V  92.0% (229/249)  IGHV4-39*01  229  ...................A.....G...........................G............A..---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-3*01   7    -------------------------------------------------------------------------...........G.....  23

                                      GT------------------>                                  
                                       I  L  G  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13262  271  ATTTTAGGTAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  325
D  95.0% (19/20)    IGHD3-3*01   24   ...----------------------------------------------------  26
J  97.8% (44/45)    IGHJ4*02     4    ----------..................................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_349263

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13263  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_13263  91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_13263  181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_13263  271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_118966

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           344     6e-97
IGHD3-3*01                                                                                            10.3    122  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTCTTC	TTTTT	CTCCAAGAGAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTCTTCTTTTTCTCCAAGAGAGAGTCTACTACTTTGACTAC	ARSLLFLQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  K  S  G  G  Y  Y  W  S  W  V  R  Q  H  P  G  K  G 
                    Query_13264  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAAGAGTGGTGGCTACTACTGGAGCTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  94.4% (234/248)  IGHV4-31*03  49   ..................................C.....GC........T...............A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       P  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  A  T  S 
                    Query_13264  91   CCGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGCCACGTCT  180
V  94.4% (234/248)  IGHV4-31*03  139  .T................................G.............C......................C........A.A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  S  L  L  F  L  Q  E 
                    Query_13264  181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACTGTCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTCTTCTTTTTCTCCAAGAG  270
V  94.4% (234/248)  IGHV4-31*03  229  .....................C....C..........C..............................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD3-3*01   10   ----------------------------------------------------------------------------.....---------  14

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13264  271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_118967

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         336     1e-94
IGHD3-9*01                                                                                            14.1    8.5  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CGTGCTCCCGTATTGCAGTCTGACT	ACTTGTTATT	N/A	TGGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGTGCTCCCGTATTGCAGTCTGACTACTTGTTATTTGGAAGTC	ASVLPYCSLTTCYLEV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  L  I  F  S  A  H  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13265    1    GGTCCCTGAGACTCTCCTGTGCTGCCTCGGGACTCATCTTCAGTGCCCATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-30-3*01  47   ......................A.....T...T...C.......AG.T..........................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  G  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13265    91   AGTGGGTGGCGGTTATATCATATGATGGAAGCAATAAATACTACGGAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-30-3*01  137  ..........A..................................C............................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                        R  N  T  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  V  L  P  Y  C  S  L  
                    Query_13265    181  GGAACACGCTGTATCTAGAAATGAATAGCCTGAGAGCCGAGGACACGGCTGTCTACTACTGTGCGAGCGTGCTCCCGTATTGCAGTCTGA  270
V  93.5% (231/247)  IGHV3-30-3*01  227  A...............GC.......C...........T..............G..T...........-----------------------  293
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                        T------------------>                                 
                                        T  T  C  Y  L  E  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13265    271  CTACTTGTTATTTGGAAGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
D  90.0% (9/10)     IGHD3-9*01     17   --...G......-----------------------------------------  26
J  97.6% (40/41)    IGHJ6*02       22   ------------....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_118964

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_13266  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_13266  91   CTCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..G...............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G 
                    Query_13266  181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .........................G................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13266  271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_118965

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           357     1e-100
IGHD1-26*01                                                                                           10.3    141   
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTGTGAATAGAGAGAGGCCAAAG	GTGGG	CTTTGAGTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTGTGAATAGAGAGAGGCCAAAGGTGGGCTTTGAGTTCTACGATATGGACGTC	ARAVNRERPKVGFEFYDMDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	259	31	0	89.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  R  P  G  S  S  V  G  V  S  C  K  A  S  G  D  S  F  S  T  S
                    Query_13267  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAGGCCTGGGTCCTCGGTGGGGGTCTCCTGTAAGGCTTCTGGAGACAGCTTCAGCACCTC  90
V  89.3% (259/290)  IGHV1-69*06  6    ..................G..........A..A................AA.........C.............G..C........G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  V  S  W  V  R  Q  A  P  G  Q  G  L  Q  W  M  G  G  I  T  P  V  F  G  T  P  N  Y  A  P
                    Query_13267  91   TGCTGTCAGTTGGGTGCGGCAGGCCCCTGGACAAGGACTTCAGTGGATGGGAGGGATCACCCCTGTCTTTGGCACACCAAACTACGCACC  180
V  89.3% (259/290)  IGHV1-69*06  96   ....A....C........A.................G...G..................T....A.......T...G............A  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        N  F  Q  A  R  V  T  I  T  A  D  K  S  T  S  T  V  C  M  E  L  T  R  L  T  S  E  D  T  A
                    Query_13267  181  GAACTTCCAGGCCAGAGTCACGATTACCGCGGACAAATCCACGAGTACAGTCTGTATGGAGCTGACCAGACTGACATCTGAGGACACGGC  270
V  89.3% (259/290)  IGHV1-69*06  186  ...G.......G.................................C....C..AC..........G...C....G...............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  Y  C  A  R  A  V  N  R  E  R  P  K  V  G  F  E  F  Y  D  M  D  V  W  G  Q  G  T  T
                    Query_13267  271  CATGTATTATTGTGCGAGAGCTGTGAATAGAGAGAGGCCAAAGGTGGGCTTTGAGTTCTACGATATGGACGTCTGGGGCCAAGGGACCAC  360
V  89.3% (259/290)  IGHV1-69*06  276  .G.......C..........----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD1-26*01  7    -------------------------------------------.....------------------------------------------  11
J  95.9% (47/49)    IGHJ6*02     14   ---------------------------------------------------------.....G...........................  46

                                                      
                                        V  I  V  S  S 
                    Query_13267  361  GGTCATCGTCTCCTCA  376
J  95.9% (47/49)    IGHJ6*02     47   .....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_209598

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            378     3e-107
IGHD6-6*01                                                                                            21.8    0.044 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGTCGA	ATACCAGCTCGTCC	ACGAGGAAAGTCGG	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGTCGAATACCAGCTCGTCCACGAGGAAAGTCGGACTTTGACTAC	ARSRIPARPRGKSDFDY	264	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	77	27	25	2	0	92.6
FR2-IMGT	78	128	51	49	2	0	96.1
CDR2-IMGT	129	149	21	20	1	0	95.2
FR3-IMGT	150	263	114	108	6	0	94.7
CDR3-IMGT (germline)	264	268	5	5	0	0	100
Total	N/A	N/A	268	255	13	0	95.1


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  G  V  S  G  G  S  I  S  S  D  N  W  W  G  W  V  
                    Query_13268  1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCACCTGCGGTGTCTCTGGTGGCTCCATCAGCAGTGATAACTGGTGGGGTTGGGTCC  90
V  95.1% (255/268)  IGHV4-4*02   26   ................T.........................C.........................AG..........A.........  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  T  G  S  T  S  Y  N  P  S  L  K  S  R  V  
                    Query_13268  91   GCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAGATCTATCATACTGGGAGCACCAGCTACAACCCGTCCCTCAAGAGTCGAGTCA  180
V  95.1% (255/268)  IGHV4-4*02   116  .....................................A..........G...........A.............................  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  N  L  T  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  
                    Query_13268  181  CCATATCAGTCGACAAGTCCAAGAACCAGTTCTCCCTGAACCTGACGTCTGTGACCGCCGCGGACACGGCCATGTATTACTGTGCGAGGA  270
V  95.1% (255/268)  IGHV4-4*02   206  ..........A.............................G....GC........................G................--  293
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A     

                                      --------------CDR3-IMGT-------------------->                                  
                                      S  R  I  P  A  R  P  R  G  K  S  D  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13268  271  GTCGAATACCAGCTCGTCCACGAGGAAAGTCGGACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  348
D  92.9% (13/14)    IGHD6-6*01   5    -----...G..........-----------------------------------------------------------  18
J  100.0% (45/45)   IGHJ4*02     4    ---------------------------------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_209599

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            357     1e-100
IGHD2-15*01                                                                                           10.3    119   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	ACGCCCAA	AGGAT	GACTTCAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGAAAAGATAACGCCCAAAGGATGACTTCAATTGACTCC	GKDNAQRMTSIDS	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	252	10	9	1	0	90
Total	N/A	N/A	252	240	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  F  A  A  S  G  L  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13269  1    GGTCCCTGAGACTCTCCTTTGCAGCCTCTGGACTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  95.2% (240/252)  IGHV3-9*01   47   ..................G.............T.........................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  G  I  S  W  N  S  G  T  I  G  Y  A  D  S  V  K  G  R  F  N  I  S  R  D  N  A  
                    Query_13269  91   AATGGGTCGCAGGTATTAGTTGGAATAGTGGCACCATAGGCTATGCGGACTCTGTGAAGGGCCGATTCAATATCTCCAGAGACAACGCCA  180
V  95.2% (240/252)  IGHV3-9*01   137  .G......T......................T.G...................................CC...................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  G  K  D  N  A  Q  R  M  T  
                    Query_13269  181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGAGAACTGAGGACACGGCCTTATATTACTGTGGAAAAGATAACGCCCAAAGGATGACTT  270
V  95.2% (240/252)  IGHV3-9*01   227  ..........G........................G................G..........C........------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  100.0% (5/5)     IGHD2-15*01  1    --------------------------------------------------------------------------------.....-----  5

                                      ---------->                                  
                                      S  I  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13269  271  CAATTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.6% (41/42)    IGHJ4*02     7    ---......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_118960

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           316     2e-88
IGHD2-8*01                                                                                            12.2    32   
IGHJ4*02                                                                                              48.8    7e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCAGTTTGCGCC	TGTATG	GCTATCTTGCCAGTGCCCAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGCAGTTTGCGCCTGTATGGCTATCTTGCCAGTGCCCAG	AKDRSLRLYGYLASAQ	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	226	24	0	90.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13270  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAATACCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.4% (226/250)  IGHV3-30*18  47   ..........................................G..G.....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  S  D  G  V  H  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13270  91   AGTGGGTGTCAGTTATATCAAGTGATGGAGTTCACAAGAACTATGTCGACTCCGTAAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  90.4% (226/250)  IGHV3-30*18  137  ........G...........TA.......AG.A.T..AT......CA........G..................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  K  S  L  R  V  E  D  T  G  V  Y  F  C  A  K  D  R  S  L  R  L  Y  
                    Query_13270  181  AGAACACTCTCTATCTGCAAATGAAAAGCCTGAGAGTTGAAGACACGGGTGTTTATTTTTGTGCGAAAGATCGCAGTTTGCGCCTGTATG  270
V  90.4% (226/250)  IGHV3-30*18  227  .......G..G..............C..........C...G.......C...G....AC...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-8*01   19   ------------------------------------------------------------------------------------......  24

                                      T------------------>                                  
                                      G  Y  L  A  S  A  Q  W  G  R  G  S  L  V  P  V  S  S  
                    Query_13270  271  GCTATCTTGCCAGTGCCCAGTGGGGCCGGGGATCCCTGGTCCCCGTCTCCTCAG  324
J  91.2% (31/34)    IGHJ4*02     15   --------------------.......A....A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_118961

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           392     2e-111
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GGGACT	AGGATATTGTCGTGGTACC	GACTGCAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGGACTAGGATATTGTCGTGGTACCGACTGCACCTACTACGGTTTGGACGTC	ARGLGYCRGTDCTYYGLDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	107	7	0	93.9
CDR3-IMGT (germline)	291	295	5	4	1	0	80
Total	N/A	N/A	293	272	21	0	92.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  S  F  S 
                    Query_13271  3    CAGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCAGTTTCAGC  92
V  92.8% (272/293)  IGHV1-69*12  1    ..............G........G..........................................................CC......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  D  A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  L  I  P  I  F  G  I  L  N  Y 
                    Query_13271  93   GACGATGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCCTCATCCCTATCTTTGGTATATTAAACTAC  182
V  92.8% (272/293)  IGHV1-69*12  91   AG.T.........G.............................................GA..................C.GC.......  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  S  V  D  E  S  T  S  T  T  Y  M  E  L  S  S  L  R  S  D  D 
                    Query_13271  183  GCACAGAAATTCCAGGGCAGAGTCACGATTTCCGTGGACGAGTCCACGAGCACAACCTACATGGAGCTGAGCAGCCTGAGATCTGACGAC  272
V  92.8% (272/293)  IGHV1-69*12  181  ........G.....................A...C......A............G...............................G...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  V  Y  F  C  A  R  G  L  G  Y  C  R  G  T  D  C  T  Y  Y  G  L  D  V  W  G  Q  G  T 
                    Query_13271  273  ACGGCCGTGTATTTCTGTGCAAGGGGACTAGGATATTGTCGTGGTACCGACTGCACCTACTACGGTTTGGACGTCTGGGGCCAGGGGACC  362
V  92.8% (272/293)  IGHV1-69*12  271  .............A......G..-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  89.5% (17/19)    IGHD2-2*01   1    -----------------------------..........A..A.....------------------------------------------  19
J  94.2% (49/52)    IGHJ6*02     11   --------------------------------------------------------..........A................A......  44

                                                        
                                       T  V  I  V  S  S 
                    Query_13271  363  ACGGTCATCGTCTCCTCA  380
J  94.2% (49/52)    IGHJ6*02     45   .......C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_209595

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	26	25	23	2	0	92
CDR1-IMGT	27	56	30	23	1	6	76.7
FR2-IMGT	57	107	51	45	6	0	88.2
CDR2-IMGT	108	128	21	15	6	0	71.4
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	249	220	23	6	88.4


Alignments

                                      <-------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT------
                                        L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  L
                    Query_13272  2    CCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCCT  91
V  88.4% (220/249)  IGHV4-34*01  51   .....................C..T............------........C.......G....AT.........C...........G..  134
                                        L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L

                                      ---------------><-----CDR2-IMGT-----><----------------------------------------------------
                                        E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  K
                    Query_13272  92   GGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCAA  181
V  88.4% (220/249)  IGHV4-34*01  135  ...G................A..A.AG.....G..C.........C.C.......A................A.................  224
                                        E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K

                                      FR3-IMGT----------------------------------------------------><-------------------------CDR
                                        N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  W
                    Query_13272  182  GAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCTG  271
V  88.4% (220/249)  IGHV4-34*01  225  ..................GC............C........................C...........---------------------  293
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                     
D  91.7% (11/12)    IGHD6-19*01  7    -------------------------------------------------------------------------------....G......  17

                                      3-IMGT------------------------>                                 
                                        G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_13272  272  GGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  335
D  91.7% (11/12)    IGHD6-19*01  18   .---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_209590

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           277     9e-77
IGHD2-21*01                                                                                           10.3    121  
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TGTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTGTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFVQERVYYFDY	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR2-IMGT	56	104	49	48	1	0	98
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	189	183	6	0	96.8


Alignments

                                      <-------------------FR2-IMGT--------------------><-----CDR2-IMGT-----><-------------------
                                        T  W  I  R  Q  H  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K
                    Query_13273  56   GACCTGGATCCGCCAGCACCCAGGGAAGGGCCTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAA  145
V  96.8% (183/189)  IGHV4-31*02  108  ..G..............................................................G.............C..........  197
                                        S  W  I  R  Q  H  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K

                                      ---------------------------------FR3-IMGT-------------------------------------------------
                                        S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y
                    Query_13273  146  GAGTCGAGTTACAATATCAGTGGACACGTCTAAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTA  235
V  96.8% (183/189)  IGHV4-31*02  198  ............C........A...................................C................................  287
                                        S  R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y

                                      ---><-------------------CDR3-IMGT------------------>                                  
                                        C  A  R  S  S  L  F  V  Q  E  R  V  Y  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_13273  236  CTGTGCGAGGTCTTCTCTATTTGTCCAAGAAAGAGTCTACTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  321
V  96.8% (183/189)  IGHV4-31*02  288  .........-----------------------------------------------------------------------------  296
                                        C  A                                                                                
D  100.0% (5/5)     IGHD2-21*01  22   ----------------.....-----------------------------------------------------------------  26
J  97.9% (47/48)    IGHJ4*02     1    --------------------------------------.....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_209591

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           305     3e-85
IGHD3-10*02                                                                                           14.1    8.3  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	CTATGTT	AAGGGGCTCTGATAG	TTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTATGTTAAGGGGCTCTGATAGTTTTAATACT	ATMLRGSDSFNT	250	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	63	36	27	3	6	75
FR2-IMGT	64	114	51	49	2	0	96.1
CDR2-IMGT	115	135	21	18	3	0	85.7
FR3-IMGT	136	249	114	102	12	0	89.5
CDR3-IMGT (germline)	250	253	4	4	0	0	100
Total	N/A	N/A	253	226	21	6	89.3


Alignments

                                      <--------FR1-IMGT---------><-------------CDR1-IMGT------------><--------------------FR2-IM
                                       T  L  S  L  T  C  N  V  S  G  G  S  I  I  I  S  T  N  G  Y  Y  W  G  W  I  R  Q  P  P  G 
                    Query_13274  1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCATCATCATCAGTACAAATGGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGG  90
V  89.3% (226/253)  IGHV4-39*01  49   ...................C....................G..GT....------...................................  132
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S        S  Y  Y  W  G  W  I  R  Q  P  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  G  L  E  W  I  G  T  I  S  H  S  G  T  T  Y  Y  K  A  S  L  K  S  R  V  T  I  S  V  D 
                    Query_13274  91   AAGGGACTGGAGTGGATTGGGACTATCTCTCATAGTGGGACCACCTACTACAAGGCGTCCCTCAAGAGTCGAGTCACCATATCCGTCGAC  180
V  89.3% (226/253)  IGHV4-39*01  133  .....G................G.....A.T.........G............CC...............................A...  222
                                       K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-------------CDR3-IM
                                       T  S  K  N  Q  F  S  L  R  V  T  S  V  T  A  A  D  T  A  M  F  Y  C  A  T  M  L  R  G  S 
                    Query_13274  181  ACGTCGAAAAATCAGTTCTCCCTGAGGGTGACCTCTGTGACCGCCGCAGACACGGCTATGTTTTATTGTGCGACTATGTTAAGGGGCTCT  270
V  89.3% (226/253)  IGHV4-39*01  223  .....C..G..C.............A.C...G.........................G...A...C.......-----------------  295
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                   
D  100.0% (7/7)     IGHD3-10*02  7    -------------------------------------------------------------------------.......----------  13

                                      GT------------>                                  
                                       D  S  F  N  T  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13274  271  GATAGTTTTAATACTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  319
J  93.2% (41/44)    IGHJ3*02     7    -----....G...TC..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_209593

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           305     3e-85
IGHD3-10*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	GACCAAGG	GGTTCGGGGACTTA	CTGCAGCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGACCAAGGGGTTCGGGGACTTACTGCAGCCCTTTGACCAC	VRTKGFGDLLQPFDH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	221	26	0	89.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  T  S  G  F  T  L  S  S  S  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13275  1    GGTCCCTGAGACTCTCCTGTGAAACCTCTGGATTCACCTTGAGTAGTTCCACCATGAACTGGGTTCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.5% (221/247)  IGHV3-21*01  47   .....................C.G................C.....C.AT.G............C.........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  T  S  G  S  T  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13275  91   AGTGGGTCGCATCTATTACTAGTGGAAGCACTTACATCTACTACGCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAACGCCA  180
V  89.5% (221/247)  IGHV3-21*01  137  ........T....C....G....A.T..T.G......A........................C...........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  L  S  G  L  R  V  E  D  T  A  V  Y  S  C  V  R  T  K  G  F  G  D  L  
                    Query_13275  181  AGAACTCACTGTTTCTGCAACTGAGTGGCCTGAGAGTCGAGGACACGGCTGTCTATTCCTGTGTGAGGACCAAGGGGTTCGGGGACTTAC  270
V  89.5% (221/247)  IGHV3-21*01  227  ............A.......A...ACA.........C...............G....A.....C...-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.9% (13/14)    IGHD3-10*01  11   ---------------------------------------------------------------------------..........G...-  24

                                      ---------------->                                 
                                      L  Q  P  F  D  H  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_13275  271  TGCAGCCCTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  320
J  97.7% (42/43)    IGHJ4*02     5    -------.......T...................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_201369

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD2-8*02                                                                                            14.1    9.5   
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGT	TACTGGT	ACCAACGCCAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTC	ARLVTGTNATYGLDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_13276  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAGCTA  90
V  98.3% (284/289)  IGHV5-51*03  6    .................................................................G........................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  R  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_13276  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGAGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ........G..................................T..............................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13276  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ...................................A.........C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  L  V  T  G  T  N  A  T  Y  G  L  D  V  W  G  Q  G  S  K  V  T  V  S  S
                    Query_13276  271  CATGTATTACTGTGCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTCTGGGGCCAAGGGAGCAAGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-8*02   10   ------------------------.......-----------------------------------------------------------  16
J  93.9% (46/49)    IGHJ6*02     14   ------------------------------------------.......A.....................C..C...............  61

                                       
                                       
                    Query_13276  361  A  361
J  93.9% (46/49)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_201368

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           413     2e-117
IGHD3-22*01                                                                                           35.3    4e-06 
IGHJ2*01                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGGA	TACTATGACAGTAGTGGTTAT	N/A	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTC	ARDGYYDSSGYYYDL	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	109	5	0	95.6
CDR3-IMGT (germline)	292	299	8	7	1	0	87.5
Total	N/A	N/A	296	280	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  S  Y  S  F  S 
                    Query_13277  4    CAGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTAGTTACAGTTTTAGC  93
V  94.6% (280/296)  IGHV1-18*04  1    .....T........G............................................................G......CC....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  H  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  D  Y 
                    Query_13277  94   AGCCACGGTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTTGAGTGGATGGGGTGGATCAGCGGTTACAATGGTAACACAGACTAT  183
V  94.6% (280/296)  IGHV1-18*04  91   ...T..................................A.................A..........C................A.....  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  R  K  F  Q  G  R  V  T  M  T  A  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  T  S  D  D 
                    Query_13277  184  GCACGGAAGTTCCAGGGCAGAGTCACCATGACCGCAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGACATCTGACGAC  273
V  94.6% (280/296)  IGHV1-18*04  181  ....A....C.......................A.............................................G..........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  R  D  G  Y  Y  D  S  S  G  Y  Y  Y  D  L  W  G  R  G  T  L  V  T  V 
                    Query_13277  274  ACGGCCGTGTATTACTGTGCGCGAGATGGATACTATGACAGTAGTGGTTATTACTACGACCTCTGGGGCCGGGGAACCCTGGTCACTGTC  363
V  94.6% (280/296)  IGHV1-18*04  271  .....................A....----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  95.2% (20/21)    IGHD3-22*01  5    ------------------------------........T............---------------------------------------  25
J  91.3% (42/46)    IGHJ2*01     8    ---------------------------------------------------....T...T...........T..C...............  46

                                             
                                       S  S  
                    Query_13277  364  TCCTCAG  370
J  91.3% (42/46)    IGHJ2*01     47   .......  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_201366

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           352     3e-99
IGHD1-26*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	GAG	GTGGGAG	T	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGAGGTGGGAGTTACTACTACGCCATGGACGTC	ARGGGSYYYAMDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  H  W  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_13278  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAGTCATTGGATGCACTGGGTCCGCCAAGCTCCAGGGAGGGGGCTGG  90
V  95.2% (237/249)  IGHV3-74*01  47   ...........................................T..CT.C...............................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  H  T  D  G  S  S  T  S  Y  V  D  S  V  K  G  R  F  T  V  S  R  D  N  G  
                    Query_13278  91   TGTGGGTCTCACGTATTCACACTGATGGGAGTAGCACAAGCTATGTGGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGGCA  180
V  95.2% (237/249)  IGHV3-74*01  137  .................A.T.G.....................C.C.........................A...............C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  G  G  S  Y  Y  Y  
                    Query_13278  181  AGAACACGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGGAGGTGGGAGTTACTACTACG  270
V  95.2% (237/249)  IGHV3-74*01  227  .....................................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  7    ------------------------------------------------------------------------.......-----------  13
J  96.3% (52/54)    IGHJ6*02     9    --------------------------------------------------------------------------------..........  18

                                      ---------->                                 
                                      A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13278  271  CCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  96.3% (52/54)    IGHJ6*02     19   GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_201365

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           329     3e-92
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACGATGC	CTACGGT	C	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATGACGATGCCTACGGTCTTGACTAC	VRDDDAYGLDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  W  M  H  W  V  R  Q  A  P  G  K  G  P  
                    Query_13279  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGACACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCCGG  90
V  92.0% (230/250)  IGHV3-74*01  47   ..............................................CT.......................................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  C  V  A  R  I  K  S  D  G  S  Y  R  D  Y  A  D  F  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13279  91   TGTGCGTCGCACGTATCAAGAGTGATGGGAGTTACAGAGACTACGCGGACTTCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.0% (230/250)  IGHV3-74*01  137  ....G...T.......T..T............AG..C.AG...........C......................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  I  L  Y  L  Q  M  N  S  L  S  A  D  D  T  A  V  Y  Y  C  V  R  D  D  D  A  Y  G  L  
                    Query_13279  181  AGAACATTCTGTATTTGCAAATGAACAGTCTGAGTGCCGACGACACGGCTGTCTATTACTGTGTAAGAGATGACGATGCCTACGGTCTTG  270
V  92.0% (230/250)  IGHV3-74*01  227  ......CG......C...................A.....G...........G..........C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD4-17*01  4    -------------------------------------------------------------------------------.......----  10
J  95.2% (40/42)    IGHJ4*02     7    ---------------------------------------------------------------------------------------...  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  L  S  S  
                    Query_13279  271  ACTACTGGGGCCAGGGGACCCTGGTCACCCTCTCCTCAG  309
J  95.2% (40/42)    IGHJ4*02     10   ................A............G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_201364

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           329     3e-92
IGHD6-13*01                                                                                           14.1    8.3  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	GAATGAACACTGC	CTGGTAC	TTGCTT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGAACACTGCCTGGTACTTGCTTTACTTTGAAGAC	ARMNTAWYLLYFED	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	228	18	0	92.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  E  Y  A  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_13280  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTGAATATGCCATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.7% (228/246)  IGHV3-23*01  47   ...........................................CAGC.........A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  L  S  G  T  G  G  S  T  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_13280  91   AGTGGGTCTCAAGTCTTAGTGGGACTGGTGGTAGCACATACTACCCAGACTCCGTGAAGGGCCGGTTCACCGTGTCCAGAGACAATTCCA  180
V  92.7% (228/246)  IGHV3-23*01  137  ...........GC.A.......T.G...................G..........................A.C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  M  N  T  A  W  Y  L  
                    Query_13280  181  AGAACACTCTGTATCTACAAATGAGCAGCCTGAGAGCCGAGGACACGGCCGTGTATTATTGTGCGAGAATGAACACTGCCTGGTACTTGC  270
V  92.7% (228/246)  IGHV3-23*01  227  .......G........G.......A...........................A.....C.......------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ------------->                                  
                                      L  Y  F  E  D  W  G  R  G  T  L  V  T  V  S  S  
                    Query_13280  271  TTTACTTTGAAGACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  318
J  93.5% (43/46)    IGHJ4*02     3    --........CT.........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_201363

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           330     1e-92
IGHD2-2*01                                                                                            18.0    0.62 
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAAGGGGGGGGG	ATTGCAGTAGTA	AAACCTGCC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGATCAAGGGGGGGGGATTGCAGTAGTAAAACCTGCCACTTCTCCTACGGTCTGGACGTC	TRSRGGDCSSKTCHFSYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  R  V  G  Y  Y  W  N  W  V  R  Q  H  P  G  K  G 
                    Query_13281  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAATCGTGTCGGTTACTACTGGAACTGGGTCCGCCAGCACCCCGGGAAGGGC  90
V  92.4% (230/249)  IGHV4-31*01  49   ........................................GCA...GT.............G....A.............A.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  R  I  Y  Y  N  P  S  L  K  S  L  V  T  M  S  V  D  T  S 
                    Query_13281  91   CTGGAGTGGATTGGGTACATCTATTACGGTGGGAGGATCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATGTCAGTAGACACGTCT  180
V  92.4% (230/249)  IGHV4-31*01  139  ...........................A.......C.C....................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  K  V  N  S  V  S  P  A  D  T  A  V  Y  Y  C  T  R  S  R  G  G  D  C  S 
                    Query_13281  181  AAGAACCAGTTCTCCCTGAAGGTGAATTCTGTGAGTCCCGCGGACACGGCCGTCTATTACTGTACGAGATCAAGGGGGGGGGATTGCAGT  270
V  92.4% (230/249)  IGHV4-31*01  229  .....................C...GC.......C.G................G.........G.....---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD2-2*01   6    ----------------------------------------------------------------------------------....T...  13

                                      CDR3-IMGT-------------------------->                                 
                                       S  K  T  C  H  F  S  Y  G  L  D  V  W  G  Q  G  T  T  V  A  V  S  S 
                    Query_13281  271  AGTAAAACCTGCCACTTCTCCTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTCCTCA  339
D  91.7% (11/12)    IGHD2-2*01   14   ....-----------------------------------------------------------------  17
J  92.9% (52/56)    IGHJ6*02     7    -------------...A..A.......A.............................A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_201362

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            385     4e-109
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	248	2	0	99.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13282  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.2% (248/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_13282  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  99.2% (248/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_13282  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  99.2% (248/250)  IGHV3-7*01   227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13282  271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_201361

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           397     8e-113
IGHD1-26*01                                                                                           18.0    0.67  
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCCCGGCAGG	GTGGGATCTACT	TG	ACGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTC	ARHGPAGWDLLDAMDV	289	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	68	3	0	95.8
CDR1-IMGT	76	99	24	20	4	0	83.3
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	104	10	0	91.2
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	292	273	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  K  S  L  T  I  S  C  K  G  S  G  Y  N  F  N  S  
                    Query_13283  5    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGAAGTCTCTGACGATCTCCTGTAAGGGTTCTGGATACAACTTTAACAGTA  94
V  93.5% (273/292)  IGHV5-51*01  5    .....................................C...G.........A..........................G.....C...CT  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      N  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  
                    Query_13283  95   ACTGGATCGGATGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACCAGATATAGGC  184
V  93.5% (273/292)  IGHV5-51*01  95   ..........C..................................................T.......................C..C.  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  H  V  T  I  T  A  D  K  S  T  T  T  A  Y  L  R  W  S  S  L  K  A  S  D  T  
                    Query_13283  185  CGTCCTTCCAAGGCCACGTCACCATTACAGCCGACAAGTCCACCACCACCGCCTACCTGCGGTGGAGCAGCCTGAAGGCCTCGGACACCG  274
V  93.5% (273/292)  IGHV5-51*01  185  ................G........CT...............T..G..............A.............................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-------------------CDR3-IMGT------------------>                            
                                      A  T  Y  Y  C  A  R  H  G  P  A  G  W  D  L  L  D  A  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_13283  275  CCACTTATTACTGTGCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCT  364
V  93.5% (273/292)  IGHV5-51*01  275  ...TG.................--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD1-26*01  7    ----------------------------------......G.....--------------------------------------------  18
J  97.9% (46/47)    IGHJ6*02     16   ------------------------------------------------...G......................................  57

                                           
                                      S  S 
                    Query_13283  365  CCTCA  369
J  97.9% (46/47)    IGHJ6*02     58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_201360

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           329     3e-92
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ2*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCAAAGCAGG	TTACTATGATAATAGTGG	CCCAGGTCAAGAG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGCCAAAGCAGGTTACTATGATAATAGTGGCCCAGGTCAAGAGTTCGATCTC	TRAKAGYYDNSGPGQEFDL	237	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	122	24	24	0	0	100
FR3-IMGT	123	236	114	108	6	0	94.7
CDR3-IMGT (germline)	237	243	7	6	1	0	85.7
Total	N/A	N/A	232	221	11	0	95.3


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  E  F  T  F  S  H  Y  G  M  H  W  V  R  K  A  P  G  K  G  L  E  W  V  A  V  I 
                    Query_13284  12   TGTGCAGCGTCTGAATTCACCTTCAGTCACTATGGCATGCACTGGGTCCGCAAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTTATA  101
V  95.3% (221/232)  IGHV3-33*01  64   .............G.............AG......................C......................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       W  Y  D  G  S  N  K  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  E  N  T  L  Y  L 
                    Query_13284  102  TGGTATGATGGAAGTAATAAAAAGTATGCAGACTCCGTGAAGGGGCGATTCACCATCTCCAGAGACAACTCCGAGAACACGCTGTATCTG  191
V  95.3% (221/232)  IGHV3-33*01  154  .....................T.C....................C.......................T...A.................  243
                                       W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------------CDR3-IMGT------------
                                       Q  M  N  S  L  R  A  K  D  T  A  V  Y  Y  C  T  R  A  K  A  G  Y  Y  D  N  S  G  P  G  Q 
                    Query_13284  192  CAAATGAACAGCCTGAGAGCCAAGGACACGGCTGTGTATTACTGTACGAGAGCCAAAGCAGGTTACTATGATAATAGTGGCCCAGGTCAA  281
V  95.3% (221/232)  IGHV3-33*01  244  .....................G.......................G......--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  94.4% (17/18)    IGHD3-22*01  4    --------------------------------------------------------------...........G......----------  21

                                      ----------->                                  
                                       E  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_13284  282  GAGTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCTTCAG  327
J  97.7% (42/43)    IGHJ2*01     11   ---......................................C....  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_52967

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           361     4e-102
IGHD3-3*01                                                                                            14.1    8.5   
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	CTG	TTTTTGG	CGCAGCGAATGATA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCTGTTTTTGGCGCAGCGAATGATAACTACGGTATGAACGTC	ARAVFGAANDNYGMNV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	240	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13285  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGACTGG  90
V  96.4% (240/249)  IGHV3-74*01  47   .....................................................................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  H  I  N  M  D  G  S  S  T  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_13285  91   TGTGGGTCTCACATATTAATATGGATGGGAGTAGTACAAACTACGCGGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  96.4% (240/249)  IGHV3-74*01  137  ............G........GT...........C....G...............................A..................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  M  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  A  V  F  G  A  A  N  
                    Query_13285  181  AGAACATGCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCAAGAGCTGTTTTTGGCGCAGCGAATG  270
V  96.4% (240/249)  IGHV3-74*01  227  ......C...................................................C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-3*01   10   ------------------------------------------------------------------------.......-----------  16

                                      T------------------>                                 
                                      D  N  Y  G  M  N  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13285  271  ATAACTACGGTATGAACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  98.0% (49/50)    IGHJ6*02     13   ---...........G......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_61256

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            332     4e-93
IGHD1-26*01                                                                                           12.2    35   
IGHJ3*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	N/A	GGGAGC	CGACATAGCACAAATGGAGCATTGACAGGGA	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGGGAGCCGACATAGCACAAATGGAGCATTGACAGGGAATGCTTTTCATATC	AGSRHSTNGALTGNAFHI	269	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	40	5	0	88.9
CDR1-IMGT	47	76	30	29	1	0	96.7
FR2-IMGT	77	127	51	47	4	0	92.2
CDR2-IMGT	128	154	27	22	5	0	81.5
FR3-IMGT	155	268	114	100	14	0	87.7
CDR3-IMGT (germline)	269	271	3	3	0	0	100
Total	N/A	N/A	270	241	29	0	89.3


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  V  V  S  G  D  S  V  S  S  N  S  A  A  W  G  W  I  R 
                    Query_13286  2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGTCGTCTCCGGGGACAGTGTCTCTAGCAACAGCGCTGCTTGGGGCTGGATCAGG  91
V  89.3% (241/270)  IGHV6-1*01   31   ........G...T.G......................C.A............................T.........AA..........  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  A  R  T  Y  Y  T  S  Q  W  I  H  D  Y  E  D  S  V  K  S  R 
                    Query_13286  92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGCTAGGACATACTACACGTCCCAGTGGATTCATGATTATGAAGATTCTGTGAAAAGTCGA  181
V  89.3% (241/270)  IGHV6-1*01   121  ...............................GA.............G....A.....TA.A.........C..TA...............  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  D  V  N  A  D  T  S  K  N  Q  I  S  L  Q  L  T  S  V  T  P  E  D  T  A  M  Y  F  C  A 
                    Query_13286  182  ATAGATGTCAACGCAGACACATCCAAGAACCAGATCTCCCTGCAGTTGACCTCTGTGACTCCCGAGGACACGGCTATGTACTTCTGTGCA  271
V  89.3% (241/270)  IGHV6-1*01   211  ...ACCA.....C....................T...........C...A.........................G....T.A.......  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------------------CDR3-IMGT--------------------->                                  
                                       G  S  R  H  S  T  N  G  A  L  T  G  N  A  F  H  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13286  272  GGGAGCCGACATAGCACAAATGGAGCATTGACAGGGAATGCTTTTCATATCTGGGGCCAAGGGACAATGGTCACCGTGTCTTCAG  356
D  100.0% (6/6)     IGHD1-26*01  9    ......-------------------------------------------------------------------------------  14
J  95.8% (46/48)    IGHJ3*02     3    -------------------------------------........G...............................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_61257

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           402     3e-114
IGHD3-22*01                                                                                           12.2    37    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACATTTCCTAAT	CTATGA	CAACAGAAATTACCGCCCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACATTTCCTAATCTATGACAACAGAAATTACCGCCCTCTTGACTAC	ARGHFLIYDNRNYRPLDY	291	344	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	20	4	0	83.3
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	104	10	0	91.2
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	276	19	0	93.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S 
                    Query_13287  3    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGTTACAGCTTTTCC  92
V  93.6% (276/295)  IGHV1-18*01  1    .....T.................................................................T..........C....A..  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  G  F  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  V  W  I  S  A  Y  N  G  N  T  N  Y 
                    Query_13287  93   CGTTATGGTTTCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGTCTGGATCAGCGCTTACAATGGTAACACAAACTAT  182
V  93.6% (276/295)  IGHV1-18*01  91   A.C......A.............................................GA.................................  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  H  K  F  E  D  R  V  T  M  T  T  D  T  S  T  T  T  A  Y  M  E  L  R  S  L  T  S  D  D 
                    Query_13287  183  GCACATAAATTCGAGGACAGAGTCACCATGACCACAGACACTTCCACGACCACAGCCTACATGGAACTGAGGAGCCTGACATCTGACGAC  272
V  93.6% (276/295)  IGHV1-18*01  181  .....G..GC..C...G........................A.......G...............G.............G..........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  R  G  H  F  L  I  Y  D  N  R  N  Y  R  P  L  D  Y  W  G  Q  G  T  L 
                    Query_13287  273  ACGGCCGTCTATTACTGTGCGAGAGGACATTTCCTAATCTATGACAACAGAAATTACCGCCCTCTTGACTACTGGGGCCAGGGAACCCTG  362
V  93.6% (276/295)  IGHV1-18*01  271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD3-22*01  7    --------------------------------------......----------------------------------------------  12
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------..........................  32

                                                      
                                       L  T  V  S  S  
                    Query_13287  363  CTCACCGTCTCCTCAG  378
J  97.6% (41/42)    IGHJ4*02     33   G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_185200

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           335     4e-94
IGHD2-15*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	ACCCGTTTTGTCT	TGGCGGTAGATGC	ATCTCGGGCTTGAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACCCGTTTTGTCTTGGCGGTAGATGCATCTCGGGCTTGAGTGACTTC	ARDPFCLGGRCISGLSDF	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  P  F  S  G  H  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13288  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGCCCTTCAGTGGTCACTACTGGAACTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  93.9% (229/244)  IGHV4-34*01  49   .........................A.......T...........T.........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  R  G  G  S  T  T  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_13288  91   TGGATTGGGGAAATCAATCGTGGTGGAAGCACCACCTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCTGTAGACACGTCCAAGAAC  180
V  93.9% (229/244)  IGHV4-34*01  139  ...................A.A............A.................................A..A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  F  C  L  G  G  R  C 
                    Query_13288  181  CAATTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGCGAGACCCGTTTTGTCTTGGCGGTAGATGC  270
V  93.9% (229/244)  IGHV4-34*01  229  ..G...........G....G...........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (11/13)    IGHD2-15*01  13   -----------------------------------------------------------------------------...T.....C...  25

                                      -------------------->                                  
                                       I  S  G  L  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13288  271  ATCTCGGGCTTGAGTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.6% (40/41)    IGHJ4*02     8    --------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_51628

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           380     1e-107
IGHJ3*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GGGGCCTTCAA	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCCTTCAAGATGCTTTTGATATC	ARGGLQDAFDI	281	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	166	21	16	5	0	76.2
FR3-IMGT	167	280	114	110	4	0	96.5
CDR3-IMGT (germline)	281	287	7	7	0	0	100
Total	N/A	N/A	287	265	22	0	92.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  A  Y
                    Query_13289  1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTTAGGCTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGCGCCTA  90
V  92.3% (265/287)  IGHV3-53*01  6    ..........G.....................................G..A................................TAG.A.  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        F  M  N  W  V  R  H  A  P  G  K  G  L  E  W  V  S  I  M  Y  T  G  G  F  T  Y  Y  A  D  S
                    Query_13289  91   CTTCATGAACTGGGTCCGCCACGCTCCAGGGAAGGGACTAGAGTGGGTCTCAATTATGTATACCGGTGGATTCACATACTACGCGGACTC  180
V  92.3% (265/287)  IGHV3-53*01  96   ..A.....G............G..............G..G............G....T....G......TAG............A.....  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  N  S  N  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V
                    Query_13289  181  CGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAACAACACCCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGT  270
V  92.3% (265/287)  IGHV3-53*01  186  .......................................G.....G............................................  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><-----------CDR3-IMGT----------->                                  
                                        Y  Y  C  A  R  G  G  L  Q  D  A  F  D  I  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_13289  271  CTATTACTGTGCGAGAGGGGGCCTTCAAGATGCTTTTGATATCTGGGGCCAAGGCACAAGGGTCACCGTCTCTTCAG  347
V  92.3% (265/287)  IGHV3-53*01  276  G................------------------------------------------------------------  292
                                        Y  Y  C  A  R                                                              
J  95.9% (47/49)    IGHJ3*02     2    ----------------------------..........................G....T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_51629

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-2*01                                                                                            39.1    3e-07 
IGHJ4*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAACTTAGTC	TATTGTAGTAGGACCAGCTGCTA	GGTCCCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAACTTAGTCTATTGTAGTAGGACCAGCTGCTAGGTCCCATACTTTGACTAC	ARNLVYCSRTSC*VPYFDY	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	245	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_13290  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGA  90
V  98.8% (245/248)  IGHV4-31*03  49   .........................................................................................C  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13290  91   CTGGAGTGGATTGGCTACATCTATTACAGTGGGAGCACCTACTACAATCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (245/248)  IGHV4-31*03  139  ..............G................................C..........................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  N  L  V  Y  C  S  R 
                    Query_13290  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGAACTTAGTCTATTGTAGTAGG  270
V  98.8% (245/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  95.7% (22/23)    IGHD2-2*01   5    ------------------------------------------------------------------------------...........T  16

                                      3-IMGT----------------------->                                  
                                       T  S  C  *  V  P  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13290  271  ACCAGCTGCTAGGTCCCATACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  95.7% (22/23)    IGHD2-2*01   17   ...........-----------------------------------------------------  27
J  100.0% (46/46)   IGHJ4*02     3    ------------------..............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_243345

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           325     3e-91
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ5*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAAGACTACTTTGAAGA	TAGTGCTTATTAC	N/A	TTCAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAAGACTACTTTGAAGATAGTGCTTATTACTTCAACCTC	AKDKDYFEDSAYYFNL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  R  R  S  A  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_13291  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTTAGGAGGTCTGCCATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-23*01  47   ....................G......................C..C.A.......A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  E  K  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13291  91   AGTGGGTCTCATCTATAAGTGGCAGTGGTGAAAAAACATATTACGCAAACTCCGTGAAGGGCCGCTTCACGATCTCCAGAGACAATTCCA  180
V  91.6% (229/250)  IGHV3-23*01  137  ...........G....T.....T.......GT.GC.....C......G................G.....C...................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  T  S  L  R  A  E  D  M  A  L  Y  Y  C  A  K  D  K  D  Y  F  E  D  
                    Query_13291  181  AGAACACGCTGTATCTACAAATGACCAGCCTGAGAGCCGAGGACATGGCCCTTTATTACTGTGCGAAAGATAAAGACTACTTTGAAGATA  270
V  91.6% (229/250)  IGHV3-23*01  227  ................G.......A....................C....G.A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.3% (12/13)    IGHD3-22*01  16   ----------------------------------------------------------------------------------------..  17

                                      T------------------>                                  
                                      S  A  Y  Y  F  N  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13291  271  GTGCTTATTACTTCAACCTCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  324
D  92.3% (12/13)    IGHD3-22*01  18   ...G.......-------------------------------------------  28
J  93.0% (40/43)    IGHJ5*02     9    -----------...G...C...............C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_187169

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	72	2	0	97.3
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	295	282	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  
                    Query_13292  4    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCA  93
V  95.6% (282/295)  IGHV5-51*01  2    .................................A...................................G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  
                    Query_13292  94   ACTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACA  183
V  95.6% (282/295)  IGHV5-51*01  92   G...........G...........................C....................C...................C........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  G  L  K  A  S  D  
                    Query_13292  184  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCGGCCTGAAGGCCTCGGACA  273
V  95.6% (282/295)  IGHV5-51*01  182  ...........C.....................................C...........G......A..A..................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  
                    Query_13292  274  CCGCCATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  363
V  95.6% (282/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  92.9% (13/14)    IGHD1-26*01  4    ---------------------------------..........C...-------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    --------------------------------------------------.......A................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_13292  364  CGGTCACCGTCTCCTCA  380
J  98.2% (56/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_243343

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         427     9e-122
IGHD6-6*01                                                                                            27.6    8e-04 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGC	AGTATAGCAGCTCG	N/A	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGCAGTATAGCAGCTCGCTATTTTGACTCC	ARRSIAARYFDS	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	77	72	71	1	0	98.6
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	291	282	9	0	96.9


Alignments

                                        <-------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT-
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  N 
                    Query_13293    6    GTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAAC  95
V  96.9% (282/291)  IGHV5-10-1*01  4    ..G.....................................................................................G.  93
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S 

                                        -----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><--------
                                         Y  W  I  N  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 
                    Query_13293    96   TACTGGATCAACTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAACTACAGC  185
V  96.9% (282/291)  IGHV5-10-1*01  94   ..........G...............................................................................  183
                                         Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S 

                                        --------------------------------------------FR3-IMGT--------------------------------------
                                         P  S  F  Q  G  H  V  S  I  S  A  D  M  S  I  N  T  A  Y  L  Q  W  S  S  L  G  A  S  D  T 
                    Query_13293    186  CCGTCCTTCCAAGGCCACGTCAGCATCTCAGCTGACATGTCCATCAACACTGCCTACCTGCAGTGGAGCAGCCTGGGGGCCTCGGACACC  275
V  96.9% (282/291)  IGHV5-10-1*01  184  ......................C..............A........G............................AA.............  273
                                         P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T 

                                        --------------><-------------CDR3-IMGT------------>                                  
                                         A  I  Y  Y  C  A  R  R  S  I  A  A  R  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13293    276  GCCATATATTACTGTGCGAGACGCAGTATAGCAGCTCGCTATTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  96.9% (282/291)  IGHV5-10-1*01  274  .....G...............----------------------------------------------------------------  294
                                         A  M  Y  Y  C  A  R                                                                 
D  100.0% (14/14)   IGHD6-6*01     2    ------------------------..............-----------------------------------------------  15
J  95.7% (45/47)    IGHJ4*02       2    --------------------------------------...C.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_243342

Length=400
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           397     8e-113
IGHD4-17*01                                                                                           18.0    0.68  
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGG	CTACGGTGA	GTCCGAGTAGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTCTGGACGTC	ARDLATVSPSSFYYGLDV	289	342	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	45	6	0	88.2
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	104	10	0	91.2
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	275	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_13294  1    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  90
V  92.9% (275/296)  IGHV1-18*01  1    .....T.......................G............................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  K  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y 
                    Query_13294  91   AACTATGGTATTACCTGGGTGCGGCAGGCCCCTGGACAGGGACTTAAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTAT  180
V  92.9% (275/296)  IGHV1-18*01  91   .G.........C.G.........A..............A..G...G.........................C......A...........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  M  V  R  D  R  V  T  L  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  V  D  D 
                    Query_13294  181  GCACAGATGGTCCGGGACAGAGTCACCTTGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGAGTTGACGAC  270
V  92.9% (275/296)  IGHV1-18*01  181  .......A.C...A..G..........A......C....................C..........C..............TC.......  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  S  F  Y  Y  G  L  D  V  W  G  Q  G  T  T 
                    Query_13294  271  ACGGCCGTGTATTACTGTGCGAGAGATCTGGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTCTGGACGTCTGGGGCCAAGGGACCACG  360
V  92.9% (275/296)  IGHV1-18*01  271  ..........................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------------.........--------------------------------------------------  12
J  98.1% (51/52)    IGHJ6*02     11   -----------------------------------------------------..........A..........................  47

                                                     
                                       V  T  V  S  S 
                    Query_13294  361  GTCACCGTCTCCTCA  375
J  98.1% (51/52)    IGHJ6*02     48   ...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39131424


Query= Query_243341

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           394     7e-112
IGHD6-19*01                                                                                           16.1    2.6   
IGHJ5*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CAGACGGGGTGTGTCT	GTGGCTGG	CTCGCCGGGT	AACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACAGACGGGGTGTGTCTGTGGCTGGCTCGCCGGGTAACTCGTTCGACCCC	ARDRRGVSVAGSPGNSFDP	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	71	4	0	94.7
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	20	4	0	83.3
FR3-IMGT	176	289	114	104	10	0	91.2
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	296	274	22	0	92.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_13295  2    CAGGTCCAGCTGGTACAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  91
V  92.6% (274/296)  IGHV1-18*04  1    .....T........G..........C.............................A..................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  G  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  P  Y  N  G  A  T  N  Y 
                    Query_13295  92   AGTTACGGTATCAACTGGGTGCGCCAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCCCTTATAATGGTGCCACAAACTAT  181
V  92.6% (274/296)  IGHV1-18*04  91   ..C..........G.........A.................G........................G....C......AA..........  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  N  F  Q  D  R  V  T  M  T  T  D  T  S  T  N  S  A  S  M  D  L  R  S  L  T  S  D  D 
                    Query_13295  182  GCACAGAACTTCCAGGACAGAGTCACCATGACCACAGACACATCCACCAACTCAGCCTCCATGGACCTGAGGAGCCTGACATCTGACGAC  271
V  92.6% (274/296)  IGHV1-18*04  181  ........GC......G..............................G.G.A......A......G.............G..........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  V  Y  Y  C  A  R  D  R  R  G  V  S  V  A  G  S  P  G  N  S  F  D  P  W  G  Q  G  T 
                    Query_13295  272  ACGGCCGTCTATTACTGTGCGAGAGACAGACGGGGTGTGTCTGTGGCTGGCTCGCCGGGTAACTCGTTCGACCCCTGGGGCCAGGGAACC  361
V  92.6% (274/296)  IGHV1-18*04  271  ........G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (8/8)     IGHD6-19*01  11   ------------------------------------------........----------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------------------------------------------------------------....G.........................  32

                                                         
                                       L  V  T  V  S  S  
                    Query_13295  362  CTGGTCACCGTCTCCTCAG  380
J  98.0% (48/49)    IGHJ5*02     33   ...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_243340

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGCCATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGCCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_13296  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGGAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAAAGACTGGAG  90
V  98.4% (239/243)  IGHV4-59*01  49   .........................................T......................................GG........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13296  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  ....................................................A.....................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D 
                    Query_13296  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATACAGCCATGGTTACGGAGGAGTTGAC  270
V  98.4% (239/243)  IGHV4-59*01  229  ...............................................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  93.3% (14/15)    IGHD5-18*01  6    ---------------------------------------------------------------......T........------------  20
J  100.0% (42/42)   IGHJ4*02     7    -------------------------------------------------------------------------------------.....  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13296  271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (42/42)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_187162

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            325     3e-91
IGHD6-13*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCTAGGAACAC	CTGGTAC	TCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTAGGAACACCTGGTACTCGGGGTTTTGACTAC	ARHLGTPGTRGFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	22	2	3	81.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	246	229	14	3	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  T  S  S     N  W  W  S  W  V  R  Q  S  P  G  K  G  L 
                    Query_13297  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCACCAGCAGTA---ACTGGTGGAGTTGGGTCCGCCAGTCCCCAGGGAAGGGGCTG  87
V  93.1% (229/246)  IGHV4-4*02   49   ...............................G.....T........GTA.......................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  S  Y  H  S  G  R  T  N  Y  N  A  S  F  Q  S  R  V  T  I  S  V  D  T  S  K 
                    Query_13297  88   GAGTGGATTGGGGAATCCTATCATAGTGGGCGCACCAACTACAACGCGTCCTTCCAGAGTCGAGTCACCATATCAGTAGACACGTCCAAG  177
V  93.1% (229/246)  IGHV4-4*02   139  ...............AT.............A..............C.....C..A...........................A.......  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  G  T  P  G  T  R 
                    Query_13297  178  AATCAATTCTCCCTGAATCTGAACTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGACATCTAGGAACACCTGGTACTCGG  267
V  93.1% (229/246)  IGHV4-4*02   229  ..C..G...........G....G...........................................------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD6-13*01  15   -------------------------------------------------------------------------------.......----  21

                                      ----------->                                  
                                       G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13297  268  GGTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (43/43)   IGHJ4*02     6    ---...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_187163

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           311     4e-87
IGHD3-22*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TCCGTGCA	TATTACTTTGATAGGAGT	CCCCGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCCGTGCATATTACTTTGATAGGAGTCCCCGGGACTAC	VRAYYFDRSPRDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  S  S  D  F  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13298  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTCCAGTGACTTTAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.9% (221/243)  IGHV3-21*01  47   .........................C.............T....AG..A....................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  S  S  G  T  Y  I  Y  Y  A  D  S  V  T  G  R  F  T  I  S  R  D  N  A  
                    Query_13298  91   AGTGGGTCTCATCCATAACTAGTAGTGGTACTTACATATACTACGCAGACTCAGTGACGGGCCGGTTCACCATCTCCAGAGACAACGCCA  180
V  90.9% (221/243)  IGHV3-21*01  137  ................T.G.......A...G..........................A......A.........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      R  D  S  M  S  L  Q  M  N  S  L  T  V  D  D  T  A  I  Y  Y  C  V  R  A  Y  Y  F  D  R  S  
                    Query_13298  181  GGGACTCTATGTCTCTGCAAATGAACAGCCTGACAGTCGACGACACGGCTATCTATTACTGTGTCCGTGCATATTACTTTGATAGGAGTC  270
V  90.9% (221/243)  IGHV3-21*01  227  A.A....AC...A....................G..C...G.........G.G..........---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  88.9% (16/18)    IGHD3-22*01  2    -----------------------------------------------------------------------.......A......T...-  19

                                      ---------->                                  
                                      P  R  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13298  271  CCCGGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (40/40)   IGHJ4*02     9    -----........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_51622

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           330     1e-92
IGHD3-10*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCGAAGTGTTTCC	ATGGTTCGGGGAGT	CGACAGAA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCGAAGTGTTTCCATGGTTCGGGGAGTCGACAGAATTGACTAC	ARGRSVSMVRGVDRIDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  S  F  N  T  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13299  1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTGGATTCAGTTTCAATACCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.4% (230/249)  IGHV3-30*03  47   ........................C...........CC....G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  M  A  V  I  S  F  D  G  S  R  Q  Y  Y  A  D  S  M  E  G  R  L  T  I  S  R  D  N  S  
                    Query_13299  91   AGTGGATGGCAGTAATATCATTTGATGGAAGTAGACAATACTATGCAGACTCCATGGAGGGCCGATTAACCATCTCCAGAGACAATTCCA  180
V  92.4% (230/249)  IGHV3-30*03  137  .....G.......T.......A...........ATA.................G..A..........C......................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  S  T  V  Y  L  Q  M  S  S  L  R  T  E  D  T  A  V  Y  Y  C  A  R  G  R  S  V  S  M  V  
                    Query_13299  181  AGAGCACGGTGTATCTGCAAATGAGCAGCCTGAGAACTGAGGATACGGCTGTGTATTACTGTGCGAGAGGGCGAAGTGTTTCCATGGTTC  270
V  92.4% (230/249)  IGHV3-30*03  227  ...A....C...............A..........G.......C.........................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD3-10*01  9    -----------------------------------------------------------------------------------.......  15

                                      GT-------------------->                                  
                                      R  G  V  D  R  I  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_13299  271  GGGGAGTCGACAGAATTGACTACTGGGGCCAGGGAATACTGGTCACCGTCTCCTCAG  327
D  100.0% (14/14)   IGHD3-10*01  16   .......--------------------------------------------------  22
J  95.2% (40/42)    IGHJ4*02     7    ---------------.....................CC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_51623

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD6-6*01                                                                                            14.1    9.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTC	ATTREQLVPIFDF	289	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	106	8	0	93
CDR3-IMGT (germline)	289	292	4	4	0	0	100
Total	N/A	N/A	292	272	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  L  S 
                    Query_13300  1    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATTTCCTGTAAGGGTTCTGGATACAGATTAAGC  90
V  93.2% (272/292)  IGHV5-51*01  1    .....G........G............................................C.......................C..T.C.  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  E  T  K  Y 
                    Query_13300  91   AGTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCGTCTATCCTGGTGACTCTGAGACCAAATAC  180
V  93.2% (272/292)  IGHV5-51*01  91   ..C..C.......G..........................................G...A...................T....G....  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  P  S  F  E  G  Q  V  T  I  S  A  D  K  A  S  G  T  A  F  L  Q  W  D  S  L  K  A  S  D 
                    Query_13300  181  AGCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGGCCAGCGGCACCGCCTTCCTGCAGTGGGACAGCCTGAAGGCCTCGGAC  270
V  93.2% (272/292)  IGHV5-51*01  181  ............C.............................T...T.A.........A..........AG...................  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  M  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  A  V  S  S 
                    Query_13300  271  ACCGCCATGTATTACTGTGCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCA  360
V  93.2% (272/292)  IGHV5-51*01  271  ......................--------------------------------------------------------------------  292
                                       T  A  M  Y  Y  C  A                                                                      
D  100.0% (7/7)     IGHD6-6*01   12   ------------------------------------.......-----------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    ------------------------------------------------.......A......................A...........  47

                                       
                                       
                    Query_13300  361  G  361
J  95.3% (41/43)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_187166

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           349     2e-98
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	234	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13301  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  90
V  95.5% (234/245)  IGHV4-59*01  49   ...............................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13301  91   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (234/245)  IGHV4-59*01  139  ........GT........T.......G...............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G 
                    Query_13301  181  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGA  270
V  95.5% (234/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.7% (18/19)    IGHD3-16*01  7    -----------------------------------------------------------------....T..............------  25

                                      -->                                  
                                       H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13301  271  CACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  307
J  97.2% (35/36)    IGHJ4*02     13   -................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_18056

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           291     5e-81
IGHD3-22*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAC	ATAGTACTGG	CCGAATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCACATAGTACTGGCCGAATCATTGACTAT	ARAHSTGRIIDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  G  S  L  N  G  G  T  F  Y  W  T  W  I  R  Q  F  P  G  K  G 
                    Query_13302  1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCCTCAACGGTGGAACTTTCTATTGGACCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  87.2% (218/250)  IGHV4-31*01  49   ...................C................A...G.A....TGG..A...C....G.............CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  M  G  Y  I  Y  H  V  E  S  T  S  R  N  P  S  L  K  S  Q  L  T  I  S  L  D  P  S 
                    Query_13302  91   CTGGAGTGGATGGGATACATCTATCACGTTGAGAGCACCTCCCGCAACCCGTCCCTCAAGAGTCAACTTACCATTTCACTCGACCCGTCT  180
V  87.2% (218/250)  IGHV4-31*01  139  ...........T..G.........T..AG..G........A.TA....................T.G.......A...G.A...A.....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  S  Q  F  S  L  K  L  T  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  A  H  S  T  G  R  I 
                    Query_13302  181  AAGAGCCAGTTCTCCCTAAAACTGACCTCTATGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCACATAGTACTGGCCGAATC  270
V  87.2% (218/250)  IGHV4-31*01  229  ....A............G..G....G....G.......................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-22*01  12   -------------------------------------------------------------------------......G...-------  21

                                      -------->                                  
                                       I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13302  271  ATTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.6% (41/42)    IGHJ4*02     7    -.......C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_187164

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           294     6e-82
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACG	TACGGTGAC	CCTACACTCCCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACGTACGGTGACCCTACACTCCCATACTTTGACTCT	ARTYGDPTLPYFDS	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  M  S  S  G  G  Y  L  W  S  W  I  R  Q  N  P  G  K  G 
                    Query_13303  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCTATGAGCAGTGGCGGCTATCTCTGGAGCTGGATCCGCCAAAACCCAGGGAAGGGC  90
V  87.9% (218/248)  IGHV4-31*03  49   ...............................G...C..C........T..T..CTA..................GC..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  T  S  Y  Y  S  P  S  L  K  R  R  L  T  I  S  V  G  T  S 
                    Query_13303  91   CTGGAGTGGATTGGGAGCATCTATTACAGTGGAACCTCCTACTACAGCCCGTCCCTCAAGAGGCGACTTACAATATCAGTAGGCACTTCT  180
V  87.9% (218/248)  IGHV4-31*03  139  ...............TA...............G.G.A.........A...............T...G....C..........A...G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       E  K  H  F  S  L  K  L  T  S  M  T  A  A  D  T  A  I  Y  F  C  A  R  T  Y  G  D  P  T  L 
                    Query_13303  181  GAGAAGCACTTCTCCCTGAAGCTGACCTCTATGACTGCCGCGGACACGGCCATATATTTTTGTGCGAGGACGTACGGTGACCCTACACTC  270
V  87.9% (218/248)  IGHV4-31*03  229  A....C..G................G....G....................G.G....AC........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (9/9)     IGHD4-17*01  5    ------------------------------------------------------------------------.........---------  13

                                      -------------->                                  
                                       P  Y  F  D  S  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_13303  271  CCATACTTTGACTCTTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  319
J  93.5% (43/46)    IGHJ4*02     3    ---..........AC.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_243348

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           371     7e-105
IGHD3-3*01                                                                                            31.5    6e-05 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAGTCGTACCGGCTTTCCGGCAAATTCCCAATC	ACGATTTTTGGAGTGG	CTGACCGACGACAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCAGTCGTACCGGCTTTCCGGCAAATTCCCAATCACGATTTTTGGAGTGGCTGACCGACGACAAGTACGGTATGGACGTC	ARDLSRTGFPANSQSRFLEWLTDDKYGMDV	240	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	242	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13304  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (242/247)  IGHV3-53*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  T  G  D  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  K  
                    Query_13304  91   AGTGGGTCTCAGTTATTTATACCGGTGACAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATACCAAGA  180
V  98.0% (242/247)  IGHV3-53*01  137  .....................G.....GT......................................................T......  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><------------------------------
                                      N  M  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  S  R  T  G  F  P  
                    Query_13304  181  ACATGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGATCTCAGTCGTACCGGCTTTCCGG  270
V  98.0% (242/247)  IGHV3-53*01  227  ...C...............................................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          

                                      ----------CDR3-IMGT--------------------------------------->                               
                                      A  N  S  Q  S  R  F  L  E  W  L  T  D  D  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  
                    Query_13304  271  CAAATTCCCAATCACGATTTTTGGAGTGGCTGACCGACGACAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCT  360
D  100.0% (16/16)   IGHD3-3*01   6    -------------................-------------------------------------------------------------  21
J  100.0% (48/48)   IGHJ6*02     15   --------------------------------------------..............................................  60

                                        
                                      S 
                    Query_13304  361  CA  362
J  100.0% (48/48)   IGHJ6*02     61   ..  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_197240

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           300     8e-84
IGHD3-3*01                                                                                            21.8    0.041
IGHJ5*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCCTTGGGGG	TTTTTGGAGTG	AGAACATTTGGAA	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCTTGGGGGTTTTTGGAGTGAGAACATTTGGAACGACCCC	ATLGGFWSENIWNDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	219	27	0	89


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  F  R  S  F  T  V  N  W  V  R  Q  A  P  G  R  R  L  
                    Query_13305  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCTTCAGAAGTTTTACAGTGAACTGGGTCCGCCAGGCTCCAGGGAGGAGGCTGG  90
V  89.0% (219/246)  IGHV3-21*01  47   ...................................A.......T..C.A..GCA...........................A.G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  N  S  G  S  Y  I  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_13305  91   AGTGGGTCTCATCCATCAGTAACAGTGGAAGTTATATATATTATGCAGAGTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  89.0% (219/246)  IGHV3-21*01  137  ................T....GT...A.T.....C.....C..C.....C..A.................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  L  L  F  L  E  M  T  S  L  R  V  E  D  T  A  V  Y  Y  C  A  T  L  G  G  F  W  S  E  
                    Query_13305  181  AGAACTTACTGTTTCTGGAAATGACCAGTCTGAGAGTCGAGGACACGGCTGTATATTACTGTGCGACCCTTGGGGGTTTTTGGAGTGAGA  270
V  89.0% (219/246)  IGHV3-21*01  227  ......C.....A....C......A...C.......C...............G.............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (11/11)   IGHD3-3*01   10   ----------------------------------------------------------------------------...........---  20

                                      ---------------->                             
                                      N  I  W  N  D  P  W  G  Q  G  T  L  V  T  V  S
                    Query_13305  271  ACATTTGGAACGACCCCTGGGGCCAGGGTACCCTGGTCACCGTCTC  316
J  97.2% (35/36)    IGHJ5*02     11   ----------..................A.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_186064

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           350     8e-99
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  V  R  Q  P  P  G  K  G 
                    Query_13306  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGTGGTAGTTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGA  90
V  94.8% (237/250)  IGHV4-61*01  49   .........................................C........................A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_13306  91   CTGGAGTGGATTGGGTACATCTATTACAGAGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCAGTGGACACGTCC  180
V  94.8% (237/250)  IGHV4-61*01  139  .................T...........T....G.......................................A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_13306  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  94.8% (237/250)  IGHV4-61*01  229  ....................GC............C...T...........C........C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_13306  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_2218

Length=363
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           268     6e-74
IGHD3-10*01                                                                                           14.1    8.9  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	CTCCGCCTGCCAAGCCAA	TTCGGGG	GTCTCTATAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGCTCCGCCTGCCAAGCCAATTCGGGGGTCTCTATATTACTATTACGGCATGGATGTT	ARAPPAKPIRGSLYYYYGMDV	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	25	4	0	86.2
CDR1-IMGT	30	53	24	15	9	0	62.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	210	39	0	84.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  Y  A  F  G  E  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13307  1    GGTCCCTGAGACTCTCCTGTGTGGGGTCTGGGTACGCCTTTGGTGAATATTGGATGCATTGGGTCCGCCAAGCTCCAGGGAAGGGACTGG  90
V  84.3% (210/249)  IGHV3-74*01  47   .....................CA.CC.....A.T.A....CA..AGC..C........C..........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  L  N  K  D  G  G  T  T  R  Y  V  D  S  V  K  G  R  F  T  I  P  R  D  N  A  
                    Query_13307  91   AGTGGGTCTCACGTCTGAATAAAGATGGGGGTACCACAAGATATGTGGACTCCGTGAAAGGCCGGTTCACCATCCCCAGAGACAACGCCA  180
V  84.3% (210/249)  IGHV3-74*01  137  T.............A.T....GT......A...G......C..C.C............G.....A.........T...............  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  L  F  L  Q  M  N  N  L  R  V  D  D  T  A  V  Y  F  C  A  R  A  P  P  A  K  P  I  
                    Query_13307  181  AGAACACCTTGTTTCTCCAAATGAACAATCTCAGAGTCGACGACACGGCCGTGTATTTTTGTGCAAGAGCTCCGCCTGCCAAGCCAATTC  270
V  84.3% (210/249)  IGHV3-74*01  227  .......GC...A...G..........G...G....C...G........T.......AC..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD3-10*01  13   ---------------------------------------------------------------------------------------...  15

                                      DR3-IMGT-------------------------->                                
                                      R  G  S  L  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_13307  271  GGGGGTCTCTATATTACTATTACGGCATGGATGTTTGGGGCCAAGGGACCACCGTCACCGTCTCCTC  337
D  100.0% (7/7)     IGHD3-10*01  16   ....---------------------------------------------------------------  19
J  90.6% (48/53)    IGHJ6*02     9    --------------.....C.....T.....C..C.................G..............  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35478576


Query= Query_2219

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           355     3e-100
IGHD3-22*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGAG	CACCCACCCGGATGGCAAAGATTACG	ACTATGATAGTAGTGGTTATT	CCGGGGAGGCTTCT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGCACCCACCCGGATGGCAAAGATTACGACTATGATAGTAGTGGTTATTCCGGGGAGGCTTCT	TSTHPDGKDYDYDSSGYSGEAS	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  T  M  N  W  V  R  Q  A  P  G  E  G  L  
                    Query_13308  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATACCATGAACTGGGTCCGCCAGGCTCCAGGGGAGGGGCTGG  90
V  96.0% (237/247)  IGHV3-21*01  47   ...................................................G............................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  D  S  S  S  T  Y  I  Y  Y  A  D  S  M  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13308  91   AGTGGGTCTCATCCATCGATAGTAGTAGCACCTACATATACTACGCAGACTCAATGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (237/247)  IGHV3-21*01  137  ................TAG.........T.GT.....................G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  S  T  H  P  D  G  K  D  
                    Query_13308  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTACGAGCACCCACCCGGATGGCAAAGATT  270
V  96.0% (237/247)  IGHV3-21*01  227  ..............................................................G....-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      -CDR3-IMGT--------------------------->                                  
                                      Y  D  Y  D  S  S  G  Y  S  G  E  A  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13308  271  ACGACTATGATAGTAGTGGTTATTCCGGGGAGGCTTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
D  100.0% (21/21)   IGHD3-22*01  6    ---.....................------------------------------------------------  26
J  100.0% (34/34)   IGHJ4*02     15   --------------------------------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_324188

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           316     2e-88
IGHD2-2*01                                                                                            14.1    8.8  
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGGCTCGTTGTGATAA	TACCATCTGC	CCGAAAAACTTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGGCTCGTTGTGATAATACCATCTGCCCGAAAAACTTGCTGGTTCGACCCC	ARGLVVIIPSARKTCWFDP	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	225	23	0	90.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  D  I  S  I  N  T  G  D  Y  Y  W  S  W  F  R  Q  S  P  Q  K  G 
                    Query_13309  1    ACCCTGTCCCTCACCTGCACTGTCTCTGATATCTCCATCAACACCGGTGATTACTATTGGAGCTGGTTCCGCCAGTCCCCACAGAAGGGC  90
V  90.7% (225/248)  IGHV4-31*03  49   ............................G.GG........G..GT....G......C.........A........CA....GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  F  Y  N  P  S  L  R  S  R  V  S  I  S  I  D  T  S 
                    Query_13309  91   CTGGAATGGATTGGGTACATCTATTACAGTGGGAGCACCTTCTACAACCCGTCCCTCAGGAGTCGAGTTAGCATTTCCATAGACACGTCT  180
V  90.7% (225/248)  IGHV4-31*03  139  .....G..................................A.................A...........C...A..AG...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  V  V  I  I  P 
                    Query_13309  181  AAGAACCAGTTCTCCCTGAAGGTGAACTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGGGGGCTCGTTGTGATAATACCA  270
V  90.7% (225/248)  IGHV4-31*03  229  .....................C...G...........................G..............----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.0% (9/10)     IGHD2-2*01   16   -------------------------------------------------------------------------------------.....  20

                                      3-IMGT----------------------->                                  
                                       S  A  R  K  T  C  W  F  D  P  W  G  P  G  T  L  V  S  V  S  S  
                    Query_13309  271  TCTGCCCGAAAAACTTGCTGGTTCGACCCCTGGGGCCCGGGAACCCTGGTCAGCGTCTCCTCAG  334
D  90.0% (9/10)     IGHD2-2*01   21   G....-----------------------------------------------------------  25
J  95.7% (45/47)    IGHJ5*02     5    -----------------....................A..............C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_2212

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           343     2e-96
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	237	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	26	25	25	0	0	100
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	122	21	20	1	0	95.2
FR3-IMGT	123	236	114	108	6	0	94.7
CDR3-IMGT (germline)	237	244	8	7	1	0	87.5
Total	N/A	N/A	243	231	12	0	95.1


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        L  S  L  T  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  W
                    Query_13310  2    CCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGTG  91
V  95.1% (231/243)  IGHV4-59*01  51   .....................................A...G...........G....................................  140
                                        L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W

                                      ---------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IM
                                        I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N  Q
                    Query_13310  92   GATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACCA  181
V  95.1% (231/243)  IGHV4-59*01  141  ......G..................A...............C...................................C............  230
                                        I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q

                                      GT----------------------------------------------------><-------------CDR3-IMGT------------
                                        F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D  V
                    Query_13310  182  GTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGACGT  271
V  95.1% (231/243)  IGHV4-59*01  231  .......C....G.....C..........................G...........G.....---------------------------  293
                                        F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                              
J  94.8% (55/58)    IGHJ6*02     5    ------------------------------------------------------------------.....AC.................  28

                                      >                                 
                                        W  G  Q  G  T  T  V  I  V  S  S 
                    Query_13310  272  CTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  305
J  94.8% (55/58)    IGHJ6*02     29   .......................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_2213

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*03                                                                                           338     5e-95
IGHD2-15*01                                                                                           10.3    137  
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATAGA	TC	AGGAT	GTGAACATACCCGCTGGCCTCCGGCTCCACTTT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATAGATCAGGATGTGAACATACCCGCTGGCCTCCGGCTCCACTTTTACGGTCTGGACGTC	AIDQDVNIPAGLRLHFYGLDV	267	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	80	30	24	6	0	80
FR2-IMGT	81	131	51	48	3	0	94.1
CDR2-IMGT	132	152	21	16	5	0	76.2
FR3-IMGT	153	266	114	103	11	0	90.4
CDR3-IMGT (germline)	267	274	8	7	1	0	87.5
Total	N/A	N/A	274	245	29	0	89.4


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  S  G  G  S  V  S  N  D  D  Y  F  W  S  W  
                    Query_13311  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCGTCAGTAATGATGATTACTTCTGGAGCTGGA  90
V  89.4% (245/274)  IGHV4-61*03  26   ................T........................A....C.................C.G..G.AG.....A...........  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  S  K  S  G  I  T  K  S  N  P  S  L  K  S  R  
                    Query_13311  91   TCCGGCAGCCCCCAGGGAAGGGACTGGAATGGATTGGCTACATCTCCAAAAGTGGGATCACCAAGTCCAACCCCTCCCTCAAGAGTCGAG  180
V  89.4% (245/274)  IGHV4-61*03  116  ............................G........G..T....ATT.C.......G......C.A.......................  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  S  I  S  V  D  T  S  T  N  R  F  S  L  K  L  T  S  V  T  A  V  D  T  A  V  Y  Y  C  A  
                    Query_13311  181  TCTCCATCTCAGTTGACACGTCCACGAACCGCTTCTCCCTGAAACTGACCTCTGTAACCGCTGTGGACACGGCCGTGTATTACTGTGCGA  270
V  89.4% (245/274)  IGHV4-61*03  206  ..A....A.....A..........A.....A............G....G......G.......C..........................  295
                                      V  T  I  S  V  D  T  S  K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      -----------------------CDR3-IMGT-------------------------->                               
                                      I  D  Q  D  V  N  I  P  A  G  L  R  L  H  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  
                    Query_13311  271  TAGATCAGGATGTGAACATACCCGCTGGCCTCCGGCTCCACTTTTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCT  360
V  89.4% (245/274)  IGHV4-61*03  296  G...--------------------------------------------------------------------------------------  299
                                      R                                                                                         
D  100.0% (5/5)     IGHD2-15*01  1    ------.....-------------------------------------------------------------------------------  5
J  97.9% (46/47)    IGHJ6*02     15   --------------------------------------------......A.......................................  60

                                       
                                      S
                    Query_13311  361  C  361
J  97.9% (46/47)    IGHJ6*02     61   .  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_2210

Length=289
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           198     6e-53
IGHD2-2*01                                                                                            25.7    0.002
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCACC	GTCGCGGACACGGCCGTCTATTATTGTGCGAGAGTGGAC	TGTAGTAGTACCA	N/A	ACTGC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	156	33	31	2	0	93.9
Total	N/A	N/A	156	141	15	0	90.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_13312  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  90.4% (141/156)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  V  A  D  T  A  V  Y  Y 
                    Query_13312  91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCGTCGCGGACACGGCCGTCTATTAT  180
V  90.4% (141/156)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A......------------------------  204
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T                         

                                      IMGT---------------------------------------------------->                           
                                       C  A  R  V  D  C  S  S  T  N  C  Y  Y  Q  M  D  V  W  G  L  G  T  T  V  I  V  S  S 
                    Query_13312  181  TGTGCGAGAGTGGACTGTAGTAGTACCAACTGCTACTACCAAATGGACGTCTGGGGCCTAGGGACCACGGTCATCGTCTCCTCA  264
D  100.0% (13/13)   IGHD2-2*01   8    ---------------.............--------------------------------------------------------  20
J  89.3% (50/56)    IGHJ6*02     7    ----------------------------...A.......GGT................A..............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 27664842


Query= Query_2216

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           371     6e-105
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACCTTGACTAC	ARRGYSYGYYYLDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	240	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13313  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.8% (240/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_13313  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCTATAGACACGTCCAAGAAC  180
V  98.8% (240/243)  IGHV4-59*01  139  .......................................................................AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_13313  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  98.8% (240/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  97.9% (47/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13313  271  CTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (47/48)    IGHJ4*02     6    T..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_2217

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD3-16*01                                                                                           10.3    114   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGAAAGA	GGGGG	CTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC	ARDQKEGAPDY	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	240	5	0	98


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13314  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.0% (240/245)  IGHV4-59*01  49   ...........................................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  S  I  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13314  91   TGGATTGGGTATATCTTTTACAGTGGGAGCATCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.0% (240/245)  IGHV4-59*01  139  ................A..............C..........................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  K  E  G  A  P  D  Y 
                    Query_13314  181  CAATTCTCCCTGAAACTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC  270
V  98.0% (240/245)  IGHV4-59*01  229  ..G...........G..................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-16*01  18   --------------------------------------------------------------------------.....-----------  22
J  100.0% (41/41)   IGHJ4*02     8    -----------------------------------------------------------------------------------.......  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13314  271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  100.0% (41/41)   IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_2214

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           319     2e-89
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  T  H  D  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_13315  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACGACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  91.8% (224/244)  IGHV4-59*01  49   .......................................AG..G.T..T...............................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  T  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  A  N  N 
                    Query_13315  91   TGGATTGGATACATCTATTACAGTGGGACCACCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGGCCAACAAC  180
V  91.8% (224/244)  IGHV4-59*01  139  ........G..T................G.....A............................A...............C.T....G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       P  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W 
                    Query_13315  181  CCCTTCTCGCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGG  270
V  91.8% (224/244)  IGHV4-59*01  229  .AG.....C......C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------------------------------------------....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_13315  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (35/35)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_297848

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           364     5e-103
IGHD2-15*01                                                                                           35.3    4e-06 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GGGGC	TATTGTAGTGGTGGTATGTGCTAC	ACCCCCGTCTTCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGGGGCTATTGTAGTGGTGGTATGTGCTACACCCCCGTCTTCTTCTACTCCGGTATGGACGTC	AKGGYCSGGMCYTPVFFYSGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  P  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  P  
                    Query_13316  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCCCTTCAGTACCTACTGGATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  96.8% (241/249)  IGHV3-74*01  47   ...................................A.........G........................A................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13316  91   TGTGGGTCTCACGTATCAATAGTGATGGGAGTAGCACAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (241/249)  IGHV3-74*01  137  ................T......................G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  G  Y  C  S  G  G  
                    Query_13316  181  AGAACACCCTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAAAGGGGGCTATTGTAGTGGTGGTA  270
V  96.8% (241/249)  IGHV3-74*01  227  .......G..........................................................G..---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (22/24)    IGHD2-15*01  5    --------------------------------------------------------------------------................  20

                                      --CDR3-IMGT----------------------------->                                 
                                      M  C  Y  T  P  V  F  F  Y  S  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_13316  271  TGTGCTACACCCCCGTCTTCTTCTACTCCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  344
D  91.7% (22/24)    IGHD2-15*01  21   GC......------------------------------------------------------------------  28
J  96.2% (50/52)    IGHJ6*02     11   ----------------------.....A...................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_171383

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            360     1e-101
IGHD3-10*01                                                                                           10.3    121   
IGHJ6*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	TATATATCCTCTCTACCG	CGGGG	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATATATATATCCTCTCTACCGCGGGGGGTATGGACCTT	AKDIYILSTAGGMDL	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	252	10	10	0	0	100
Total	N/A	N/A	252	241	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  K  A  S  G  F  T  F  N  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13317  1    GGTCCCTGAGACTCTCCTGTAAAGCCTCTGGATTCACCTTTAATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTGG  90
V  95.6% (241/252)  IGHV3-9*01   47   ....................GC...................G................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  T  W  N  S  G  S  M  G  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_13317  91   AGTGGGTCTCAGGTATTACTTGGAATAGTGGTAGTATGGGGTATGCGGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  95.6% (241/252)  IGHV3-9*01   137  ..................G...............C..A..C..............................A..................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  K  D  I  Y  I  L  S  T  
                    Query_13317  181  AGAACTCCCTGTATCTCCAAATGAACAGTCTGAGAGTTGAGGACACGGCCTTATATTACTGTGCAAAAGATATATATATCCTCTCTACCG  270
V  95.6% (241/252)  IGHV3-9*01   227  ................G...................C...............G...................------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    

                                      ---------------->                                 
                                      A  G  G  M  D  L  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_13317  271  CGGGGGGTATGGACCTTTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  320
D  100.0% (5/5)     IGHD3-10*01  15   .....---------------------------------------------  19
J  93.3% (42/45)    IGHJ6*02     18   -----.........G.C......................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_171382

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         389     2e-110
IGHD6-19*01                                                                                           21.8    0.046 
IGHJ3*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CACCCCCTC	ATAACAGTGGCTGG	AAGGTTTC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACCCCCTCATAACAGTGGCTGGAAGGTTTCATGCTTTTGAAATC	ARHPLITVAGRFHAFEI	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  V  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  P  S  Y
                    Query_13318    1    GCAGCTGGTGCAGTCTGGAGCAGTTGTGAAGAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGCTCTGGGTACAGTTTTCCCTCTTA  90
V  93.1% (269/289)  IGHV5-10-1*01  6    .......................AG.....A...................................T.....A.....C...A..AGC..  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  K  P  W  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  S  Y  S  P
                    Query_13318    91   CTGGATCACCTGGGTGCGCCAGAAGCCCTGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTAGTGACTCTTATACCAGCTACAGCCC  180
V  93.1% (269/289)  IGHV5-10-1*01  96   ........G..............T....G...................................................A.........  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  L  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  S  L  Q  A  S  D  T  A
                    Query_13318    181  GTCCCTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCACTAGCACTGCCTACCTGCAGTGGAGCAGCCTGCAGGCCTCGGACACCGC  270
V  93.1% (269/289)  IGHV5-10-1*01  186  ....T....................................TC..............................A................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------------CDR3-IMGT-------------------->                          
                                          I  Y  F  C  A  R  H  P  L  I  T  V  A  G  R  F  H  A  F  E  I  W  G  Q  G  T  M  V  T  V
                    Query_13318    271  CATCTATTTCTGTGCGAGACACCCCCTCATAACAGTGGCTGGAAGGTTTCATGCTTTTGAAATCTGGGGCCAAGGGACAATGGTCACCGT  360
V  93.1% (269/289)  IGHV5-10-1*01  276  ...G....A..........-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD6-19*01    5    ----------------------------...G..........------------------------------------------------  18
J  97.9% (47/48)    IGHJ3*02       3    --------------------------------------------------..........T.............................  42

                                                
                                          S  S  
                    Query_13318    361  CTCTTCAG  368
J  97.9% (47/48)    IGHJ3*02       43   ........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_171381

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-24*01                                                                                           414     5e-118
IGHD1-26*01                                                                                           14.1    9.2   
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-24*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AATAG	GGC	AGTGGGA	CCTGCTGTTTCATCG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAATAGGGCAGTGGGACCTGCTGTTTCATCGCTAC	AIGQWDLLFHRY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T  E  L 
                    Query_13319  2    CAGCTGGTGCAGTCTGGAGCCGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTCTCCGGATACACCCTCACTGAATTA  91
V  95.8% (277/289)  IGHV1-24*01  7    ........A........G..T............................................T........................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  L  T  E  L 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  H  E  V  G  K  T  I  Y  A  Q 
                    Query_13319  92   TCCATGCACTGGGTGCGACAGGCTCCTGGAAAAGGGCTTGAGTGGATGGGAGGTTTTGATCATGAAGTCGGTAAAACAATCTACGCACAG  181
V  95.8% (277/289)  IGHV1-24*01  97   .............................................................C.....AT...G.................  186
                                       S  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  M  G  G  F  D  P  E  D  G  E  T  I  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  F  Q  G  R  V  T  M  T  E  D  A  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 
                    Query_13319  182  AACTTCCAGGGCAGAGTCACCATGACCGAGGACGCATCTACAGACACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGCC  271
V  95.8% (277/289)  IGHV1-24*01  187  ..G..............................A........................................................  276
                                       K  F  Q  G  R  V  T  M  T  E  D  T  S  T  D  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  I  G  Q  W  D  L  L  F  H  R  Y  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_13319  272  GTCTATTACTGTGCAATAGGGCAGTGGGACCTGCTGTTTCATCGCTACTGGGGCCAGGGAACGCTGGCCACCGTCTCCTCAG  353
V  95.8% (277/289)  IGHV1-24*01  277  ..G.............C..---------------------------------------------------------------  295
                                       V  Y  Y  C  A  T                                                                 
D  100.0% (7/7)     IGHD1-26*01  6    ----------------------.......-----------------------------------------------------  12
J  94.7% (36/38)    IGHJ4*02     11   --------------------------------------------..................C....T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_171387

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           305     3e-85
IGHD1-26*01                                                                                           18.0    0.58 
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGATACAACGAAA	TATACTGGGACCTAC	GATGGG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGATACAACGAAATATACTGGGACCTACGATGGGTTCGATCTC	ARDDTTKYTGTYDGFDL	235	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	120	21	15	3	3	71.4
FR3-IMGT	121	234	114	106	8	0	93
CDR3-IMGT (germline)	235	242	8	8	0	0	100
Total	N/A	N/A	245	222	20	3	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  L  S  G  V  S  I  S  G  Y  Y  W  H  W  I  R  Q  P  P  W  K  G  L  E 
                    Query_13320  1    ACCCTGTCCCTCACCTGCTCTCTCTCTGGTGTCTCCATCAGTGGTTACTACTGGCACTGGATCCGGCAGCCCCCATGGAAGGGACTGGAG  90
V  90.6% (222/245)  IGHV4-59*01  49   ..................A..G.........G..........A...........AG...................G..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  N     S  G  G  T  K  Y  S  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13320  91   TGGATCGGCTATATCAAT---AGCGGGGGCACCAAGTACAGTCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  177
V  90.6% (222/245)  IGHV4-59*01  139  .....T..G......T..TAC..T...A.......C....AC..........A.....................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  F  Y  Y  C  A  R  D  D  T  T  K  Y  T  G  T 
                    Query_13320  178  CAGTTCTCCCTGAAACTGACCTCTGTGACCGCTGCGGACACGGCCTTTTATTACTGTGCGAGAGACGATACAACGAAATATACTGGGACC  267
V  90.6% (222/245)  IGHV4-59*01  229  ..............G....G.........................G.G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  86.7% (13/15)    IGHD1-26*01  3    ------------------------------------------------------------------------------....G.....G.  14

                                      ----------------->                                  
                                       Y  D  G  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_13320  268  TACGATGGGTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  319
D  86.7% (13/15)    IGHD1-26*01  15   ...-------------------------------------------------  17
J  100.0% (43/43)   IGHJ2*01     11   ---------...........................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_171386

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     6e-98
IGHD1-1*01                                                                                            14.1    7.8  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_13321  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_13321  91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_13321  181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_13321  271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_171385

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           288     5e-80
IGHD3-3*01                                                                                            10.3    122  
IGHJ2*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-3*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACAG	TTTTT	CTCCCCCGTCGGACTTCTT	CTTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATAACAGTTTTTCTCCCCCGTCGGACTTCTTCTTCTATCTC	VRDNSFSPPSDFFFYL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	217	33	0	86.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  K  N  Y  N  M  N  W  V  R  Q  A  P  G  K  R  L  
                    Query_13322  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTCAAGAACTACAACATGAACTGGGTCCGCCAGGCTCCAGGGAAGCGGCTGG  90
V  86.8% (217/250)  IGHV3-21*01  47   .....................C....................GT.G...T.G...............................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  *  V  S  S  I  R  G  R  N  N  D  I  H  Y  A  D  S  M  K  G  R  I  T  I  S  R  D  N  A  
                    Query_13322  91   AGTGAGTCTCATCGATTAGAGGTAGAAACAATGACATCCACTACGCAGACTCAATGAAGGGCCGAATCACCATCTCCAGAGACAACGCCA  180
V  86.8% (217/250)  IGHV3-21*01  137  ....G........C.....TA....T.GT.G.T....AT..............G...........T........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  N  S  L  Y  L  H  M  H  S  L  G  A  *  D  T  A  I  Y  F  C  V  R  D  N  S  F  S  P  P  
                    Query_13322  181  ACAACTCACTCTATCTCCACATGCACAGCCTGGGAGCCTAGGACACGGCTATCTATTTCTGCGTCAGAGATAACAGTTTTTCTCCCCCGT  270
V  86.8% (217/250)  IGHV3-21*01  227  .G........G.....G..A...A........A.....G...........G.G....A...T.CG.....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-3*01   10   ----------------------------------------------------------------------------.....---------  14

                                      T------------------>                                  
                                      S  D  F  F  F  Y  L  W  G  R  G  T  P  V  S  F  S  S  
                    Query_13322  271  CGGACTTCTTCTTCTATCTCTGGGGCCGTGGCACCCCAGTCTCTTTCTCCTCAG  324
J  88.6% (39/44)    IGHJ2*01     10   ----------....G.....................TG...A..G.........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_171384

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           300     8e-84
IGHD2-21*01                                                                                           12.2    30   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TT	TTGCTA	ATGCGGGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGATTTTGCTAATGCGGGGTTTGACTCC	AKDFANAGFDS	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	24	9	9	0	0	100
CDR1-IMGT	25	48	24	23	1	0	95.8
FR2-IMGT	49	99	51	44	7	0	86.3
CDR2-IMGT	100	123	24	20	4	0	83.3
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	230	211	19	0	91.7


Alignments

                                      <FR1-IMG><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-----
                                       A  A  S  G  F  T  F  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  D  Y  V  G  V  I  S 
                    Query_13323  16   GCAGCCTCTGGATTCACCTTCAGTAGGTATGGCATGCATTGGGTCCGACAGGCGCCAGGCAAGGGGCTGGACTACGTGGGAGTTATATCA  105
V  91.7% (211/230)  IGHV3-30*18  67   ..........................C...........C........C.....T.................G.GG....C..........  156
                                       A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  S 

                                      --CDR2-IMGT------><----------------------------------------------------FR3-IMGT-----------
                                       H  D  G  S  H  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 
                    Query_13323  106  CACGATGGCAGTCATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTCCAA  195
V  91.7% (211/230)  IGHV3-30*18  157  T.T.....A...A.........................................................................G...  246
                                       Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 

                                      -----------------------------------------><-----------CDR3-IMGT----------->               
                                       M  N  S  L  R  P  E  D  P  A  L  Y  Y  C  A  K  D  F  A  N  A  G  F  D  S  W  G  Q  G  A 
                    Query_13323  196  ATGAACAGCCTGAGACCTGAGGACCCGGCTCTATATTATTGTGCAAAAGATTTTGCTAATGCGGGGTTTGACTCCTGGGGCCAGGGAGCC  285
V  91.7% (211/230)  IGHV3-30*18  247  ...............G........A.....G.G.....C.....G.....----------------------------------------  296
                                       M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                           
D  100.0% (6/6)     IGHD2-21*01  19   ----------------------------------------------------......--------------------------------  24
J  93.0% (40/43)    IGHJ4*02     6    ------------------------------------------------------------------.......A.............A..  29

                                                         
                                       L  V  T  V  S  S  
                    Query_13323  286  CTTGTCACCGTCTCCTCAG  304
J  93.0% (40/43)    IGHJ4*02     30   ..G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_186060

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         318     6e-89
IGHD2-15*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCCCTCAG	ATTGTAGTG	ATGACAGGTGCAACAACGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCCCTCAGATTGTAGTGATGACAGGTGCAACAACGCGTTTGACTAC	ARGPSDCSDDRCNNAFDY	241	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  F  S  I  S  R  G  Y  F  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_13324    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCAGCAGGGGTTATTTCTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  91.4% (224/245)  IGHV4-38-2*01  49   ...............................A............T.....C.A.....................................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  A  S  I  Y  H  N  G  A  A  F  S  T  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_13324    91   GAGTGGATTGCAAGTATCTATCATAATGGGGCCGCCTTCTCCACCCCGTCCCTCAAGAGTCGGGTCACCATATCAGTTGACACGTCCAAG  180
V  91.4% (224/245)  IGHV4-38-2*01  139  ..........GG.............G....AG.A...A..A..A..................A..............A............  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------------CDR3-IM
                                         N  Q  F  S  L  K  V  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  G  P  S  D  C  S  D  D 
                    Query_13324    181  AACCAGTTCTCCCTGAAGGTGACGTCTGTGACTGCCGCAGACACGGCCTTATATTACTGTGCGAGGGGCCCCTCAGATTGTAGTGATGAC  270
V  91.4% (224/245)  IGHV4-38-2*01  229  ..................C...GC........C...............G.G..............-------------------------  293
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (9/9)     IGHD2-15*01    6    ----------------------------------------------------------------------------.........-----  14

                                        GT--------------------->                                  
                                         R  C  N  N  A  F  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_13324    271  AGGTGCAACAACGCGTTTGACTACTGGGGCCAGGGAACACTGGTCATCGTCTCCTCAG  328
J  95.3% (41/43)    IGHJ4*02       6    ---------------.......................C.......C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_171389

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           336     1e-94
IGHD1-26*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GGG	GGGAGCTACT	CTCCTTTT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGGGGGGAGCTACTCTCCTTTTTGCTTTTGATATC	VKGGATLLFAFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  M  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13325  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAATATGTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTAG  90
V  93.5% (231/247)  IGHV3-64*05  47   ..........................................G..GC.........................................G.  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  V  S  S  I  T  S  N  A  E  S  T  Y  Y  T  D  S  V  K  D  R  F  T  I  S  R  D  N  S  
                    Query_13325  91   AATCTGTCTCCTCTATTACTAGTAATGCGGAGAGCACATACTACACAGACTCAGTGAAGGACAGATTCACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-64*05  137  ...A...T..AG......G........G..GT............G...............G.............................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  G  G  A  T  L  L  F  
                    Query_13325  181  AGAACACGCTGTATCTTCAAATGAGCAGTCTGAGACCTGAGGACACGGCTGTGTATTACTGTGTGAAGGGGGGAGCTACTCTCCTTTTTG  270
V  93.5% (231/247)  IGHV3-64*05  227  ..............G....................G...............................-----------------------  293
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V                          
D  100.0% (10/10)   IGHD1-26*01  9    ----------------------------------------------------------------------..........----------  18
J  97.9% (46/47)    IGHJ3*02     4    ----------------------------------------------------------------------------------------..  5

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_13325  271  CTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  315
J  97.9% (46/47)    IGHJ3*02     6    ..........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_116791

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           439     2e-125
IGHD3-16*01                                                                                           12.2    36    
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTTGAGG	GATTAC	CAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTAC	ARSLRDYQPFYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	285	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_13326  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  98.6% (285/289)  IGHV5-51*03  6    .............................................................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_13326  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.6% (285/289)  IGHV5-51*03  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13326  181  GTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACTGC  270
V  98.6% (285/289)  IGHV5-51*03  186  ......................A................................................................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  S  L  R  D  Y  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_13326  271  CATGTATTACTGTGCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  359
V  98.6% (285/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  8    ----------------------------......-------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ------------------------------------------....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_246271

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            385     4e-109
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              102     5e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTACGGTATGGACGTC	AREKTAAVVIDYYYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	248	2	0	99.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13327  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.2% (248/250)  IGHV3-7*01   47   ...........................................T..............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_13327  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  99.2% (248/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_13327  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  99.2% (248/250)  IGHV3-7*01   227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13327  271  TTGACTACTATTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  96.6% (57/59)    IGHJ6*02     4    ---.......C..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_246272

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           291     5e-81
IGHD1-26*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGGGTCCT	TATAGTGGGA	ACCCGCAAGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGGGTCCTTATAGTGGGAACCCGCAAGGGTACTTTGACTTC	AKPGPYSGNPQGYFDF	230	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	16	3	3	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	49	2	0	96.1
CDR2-IMGT	92	115	24	16	8	0	66.7
FR3-IMGT	116	229	114	109	5	0	95.6
CDR3-IMGT (germline)	230	235	6	6	0	0	100
Total	N/A	N/A	222	204	18	0	91.9


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  G  F  T  F  S  T  S  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I  T  E  T 
                    Query_13328  14   TCTGGATTCACCTTTAGCACCTCCGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAACTATTACTGAGACT  103
V  91.9% (204/222)  IGHV3-23*01  73   ...................G..AT........C..........................................G......G..GT.G.  162
                                       S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  S  G  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       G  R  N  S  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  K  N  T  L  Y  L  Q  M  N 
                    Query_13328  104  GGTCGTAATTCATACTACGCAGACTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCAAGAACACACTGTATCTGCAAATGAAC  193
V  91.9% (204/222)  IGHV3-23*01  163  ...G...GCA............................G....C...............T...........G..................  252
                                       G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N 

                                      -----------------------------------><-------------------CDR3-IMGT------------------>      
                                       T  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  G  P  Y  S  G  N  P  Q  G  Y  F  D  F  W  G 
                    Query_13328  194  ACCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAACCGGGTCCTTATAGTGGGAACCCGCAAGGGTACTTTGACTTCTGGGGC  283
V  91.9% (204/222)  IGHV3-23*01  253  .G........................................------------------------------------------------  294
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                                 
D  100.0% (10/10)   IGHD1-26*01  3    ---------------------------------------------------..........-----------------------------  12
J  97.8% (45/46)    IGHJ4*02     3    ------------------------------------------------------------------------..........A.......  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_13328  284  CAGGGAACCCTGGTCACCGTCTCCTCAG  311
J  97.8% (45/46)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_246273

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	44	7	0	86.3
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	221	24	6	88


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_13329  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGTCAGCCACCAGGGAAGGGC  90
V  88.0% (221/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT...C.....C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_13329  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.0% (221/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_13329  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.0% (221/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_13329  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_246274

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACGGTAAAGGG	GGTTATTACT	GT	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACGGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTACGGACGTC	ARTVKGVITVYQYFATDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  R  P  G  K  G  L  E 
                    Query_13330  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCGCCCAGGGAAGGGACTGGAG  90
V  91.4% (222/243)  IGHV4-34*01  49   ................................G...T..................G..............C............G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  I  S  L  D  M  S  K  N 
                    Query_13330  91   TGGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGAGTCTCCATATCATTAGACATGTCCAAGAAT  180
V  91.4% (222/243)  IGHV4-34*01  139  .............................C..................C..A...........A........G......C.........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  I  S  V  R  V  T  S  V  T  A  A  D  T  A  T  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y 
                    Query_13330  181  CAGATCTCCGTGAGGGTGACGTCTGTGACCGCCGCGGACACGGCTACTTATTACTGTGCGAGAACGGTAAAGGGGGTTATTACTGTCTAC  270
V  91.4% (222/243)  IGHV4-34*01  229  ...T.....C...A.C...GC........................GTG...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  20   --------------------------------------------------------------------------..........------  29
J  91.4% (53/58)    IGHJ6*02     5    --------------------------------------------------------------------------------------....  8

                                      -------------------->                                 
                                       Q  Y  F  A  T  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13330  271  CAGTACTTCGCTACGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  91.4% (53/58)    IGHJ6*02     9    T.C....A..G..T........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_246275

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           386     1e-109
IGHD1-26*01                                                                                           12.2    31    
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATAT	GTGGGA	AGGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATATGTGGGAAGGTACTACTTTGACTAC	AREYVGRYYFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	249	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_13331  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  99.2% (249/251)  IGHV4-61*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  Y  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13331  91   CTGGAGTGGATTGGGTATATCTATTACAGTGGGTACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  99.2% (249/251)  IGHV4-61*01  139  .................................AG.......................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  Y  V  G  R  Y  Y 
                    Query_13331  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGAATATGTGGGAAGGTACTAC  270
V  99.2% (249/251)  IGHV4-61*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD1-26*01  7    ---------------------------------------------------------------------------......---------  12
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13331  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_246276

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           311     4e-87
IGHD4-4*01                                                                                            19.9    0.15 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATCAGC	CAGTAACTAC	TCTCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCAGCCAGTAACTACTCTCGGCTAC	ARNQPVTTLGY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	15	6	0	71.4
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  V  T  V  S  N  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_13332  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGGTCACCGTCAGTAACAACTATATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.6% (222/245)  IGHV3-53*01  47   ................................T............G......C....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  L  S  V  M  Y  S  R  G  A  T  R  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  S  S  K  
                    Query_13332  91   AGTGGCTCTCAGTCATGTATAGTCGTGGAGCCACAAGGTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGA  180
V  90.6% (222/245)  IGHV3-53*01  137  .....G.......T..T.....CG....TAG....TAC................A..........................A........  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------CDR3-IMGT----------
                                      N  T  V  Y  L  Q  M  K  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  N  Q  P  V  T  T  L  G  
                    Query_13332  181  ACACGGTGTATCTTCAAATGAAAAACCTGAGAGTCGAGGACACGGCCGTCTATTACTGTGCGAGAAATCAGCCAGTAACTACTCTCGGCT  270
V  90.6% (222/245)  IGHV3-53*01  227  .....C................C.G........C...............G...............-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (10/10)   IGHD4-4*01   7    ------------------------------------------------------------------------..........--------  16
J  97.4% (37/38)    IGHJ4*02     11   ----------------------------------------------------------------------------------------..  12

                                      ->                                  
                                      Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_13332  271  ACTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.4% (37/38)    IGHJ4*02     13   .........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_246277

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           360     1e-101
IGHD3-16*02                                                                                           35.3    4e-06 
IGHJ5*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-16*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGTGACC	ATGATGACGTTTGGGGGATTTGTCGTT	N/A	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGTGACCATGATGACGTTTGGGGGATTTGTCGTTCC	ARVGDHDDVWGICRS	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  I  Y  Y  W  S  W  I  R  Q  P  P  G  K  R 
                    Query_13333  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTGGTATTTACTACTGGAGCTGGATCCGACAGCCCCCAGGGAAGAGA  90
V  96.0% (240/250)  IGHV4-61*01  49   .................................................G.....................G...............G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  M  Y  Y  S  G  S  P  K  Y  N  P  S  L  K  S  R  A  T  I  S  L  H  T  S 
                    Query_13333  91   CTGGAGTGGATTGGGTATATGTATTACAGTGGGAGCCCCAAGTACAACCCCTCCCTCAAGAGTCGAGCCACCATATCATTACACACGTCC  180
V  96.0% (240/250)  IGHV4-61*01  139  ....................C...............A....C.........................T..........G..G........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  V  G  D  H  D  D  V 
                    Query_13333  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGAGCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGTAGGTGACCATGATGACGTT  270
V  96.0% (240/250)  IGHV4-61*01  229  ..................................C...................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  88.9% (24/27)    IGHD3-16*02  6    -------------------------------------------------------------------------------.....T.....  16

                                      ----------------->                                  
                                       W  G  I  C  R  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13333  271  TGGGGGATTTGTCGTTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  88.9% (24/27)    IGHD3-16*02  17   .......G..A.....------------------------------------  32
J  100.0% (36/36)   IGHJ5*02     16   ----------------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_246278

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           347     7e-98
IGHD1-26*01                                                                                           18.0    0.58 
IGHJ5*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TGTTGGGAGA	AGTGGGAGC	CT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATGTTGGGAGAAGTGGGAGCCTCTGGTTTGACTCC	AKDVGRSGSLWFDS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  T  F  R  N  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13334  1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCACCTTTAGAAACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-23*01  47   ........................C..................C.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  V  S  D  G  G  V  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13334  91   AGTGGGTCTCTTCTGTTAGTGATGGTGGTGTGAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (236/250)  IGHV3-23*01  137  ..........AG..A......G.A......GT..........................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  D  V  G  R  S  G  S  
                    Query_13334  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGCGAGTCGAGGACACCGCCGTATATTACTGTGCGAAGGATGTTGGGAGAAGTGGGAGCC  270
V  94.4% (236/250)  IGHV3-23*01  227  ................................A...C.........G....................A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD1-26*01  6    --------------------------------------------------------------------------------.........-  14

                                      ------------->                                  
                                      L  W  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13334  271  TCTGGTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  95.7% (45/47)    IGHJ5*01     5    -......C..............A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_49218

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           364     5e-103
IGHD1-26*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TC	GTGGGAGCTACT	GGTCGGCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCGTGGGAGCTACTGGTCGGCCTTTTGACTAC	ARVVGATGRPFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13335  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGGAATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-48*03  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  H  T  I  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13335  91   AATGGGTTTCATACATTAGTAGTAGTGGTCATACCATAGACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (241/249)  IGHV3-48*03  137  .G...........................AG.......T...................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  S  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  H  C  A  R  V  V  G  A  T  G  R  
                    Query_13335  181  AGAACTCACTGTCTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATCACTGTGCGAGAGTCGTGGGAGCTACTGGTCGGC  270
V  96.8% (241/249)  IGHV3-48*03  227  ............A...........................................T............---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD1-26*01  7    -----------------------------------------------------------------------............-------  18

                                      ---------->                                  
                                      P  F  D  Y  W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_13335  271  CTTTTGACTACTGGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  315
J  97.7% (42/43)    IGHJ4*02     6    --.........................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_62365

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           346     2e-97
IGHD3-10*01                                                                                           21.8    0.045
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TCAGCCCCGGAGATGGG	ACTCTGGTTCGGGG	CCCCGGAGATGGGACTATGGTTCGAAGAAGGGGCAG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGCCCCGGAGATGGGACTCTGGTTCGGGGCCCCGGAGATGGGACTATGGTTCGAAGAAGGGGCAGCTACGATCTGGACGTC	VSPGDGTLVRGPGDGTMVRRRGSYDLDV	243	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	232	11	0	95.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  C  Y  M  N  W  I  R  Q  A  P  G  K  G  L  
                    Query_13336  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTGCTACATGAACTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.5% (232/243)  IGHV3-11*01  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  G  R  S  G  R  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13336  91   AGTGGATTTCGTACATTGGTCGCAGTGGTAGAACCATATACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  95.5% (232/243)  IGHV3-11*01  137  .....G....A......A..A.T........T..........................................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  S  P  G  D  G  T  L  V  
                    Query_13336  181  AGAACTCACTTTATCTGCAAATGAACAGCCTGAGAGCCGATGACACGGCCGTCTATTACTGTGTCAGCCCCGGAGATGGGACTCTGGTTC  270
V  95.5% (232/243)  IGHV3-11*01  227  ..........G.............................G...........G..........---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  92.9% (13/14)    IGHD3-10*01  6    --------------------------------------------------------------------------------...A......  15

                                      ----------CDR3-IMGT------------------------------------>                                 
                                      R  G  P  G  D  G  T  M  V  R  R  R  G  S  Y  D  L  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_13336  271  GGGGCCCCGGAGATGGGACTATGGTTCGAAGAAGGGGCAGCTACGATCTGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  359
D  92.9% (13/14)    IGHD3-10*01  16   ....-------------------------------------------------------------------------------------  19
J  93.9% (46/49)    IGHJ6*02     14   ----------------------------------------.....G.A.......................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_52962

Length=417
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           408     4e-116
IGHD4-17*01                                                                                           18.0    0.71  
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCCGACCGAAGG	GGTGACTAC	GACGAGGGGGA	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCGACCGAAGGGGTGACTACGACGAGGGGGAATTACAACTATTACTACGGTATGGACGTC	ARGPTEGVTTTRGNYNYYYGMDV	292	360	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	20	4	0	83.3
FR2-IMGT	103	153	51	51	0	0	100
CDR2-IMGT	154	177	24	21	3	0	87.5
FR3-IMGT	178	291	114	106	8	0	93
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	295	278	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  T  F  R 
                    Query_13337  4    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAGG  93
V  94.2% (278/295)  IGHV1-69*01  1    ...G...................G.......................................................G.........C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  V  V  G  T  P  N  Y 
                    Query_13337  94   AATTATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTGTCGTTGGTACACCAAATTAC  183
V  94.2% (278/295)  IGHV1-69*01  91   .GC..................................................................A..T........G....C...  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  N  I  D  Y  M  E  L  S  S  L  R  S  E  D 
                    Query_13337  184  GCACAGAAATTCCAGGGCAGAGTCACAATTACCGCGGACGAATCCACCAACATAGACTACATGGAGTTGAGCAGCCTGAGATCTGAGGAC  273
V  94.2% (278/295)  IGHV1-69*01  181  ........G.................G....................G.G..C..C..........C.......................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------------------CDR3-IMGT----------------------------->   
                                       T  A  V  Y  Y  C  A  R  G  P  T  E  G  V  T  T  T  R  G  N  Y  N  Y  Y  Y  G  M  D  V  W 
                    Query_13337  274  ACGGCCGTGTATTACTGTGCGAGAGGCCCGACCGAAGGGGTGACTACGACGAGGGGGAATTACAACTATTACTACGGTATGGACGTCTGG  363
V  94.2% (278/295)  IGHV1-69*01  271  .........................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (9/9)     IGHD4-17*01  8    --------------------------------------.........-------------------------------------------  16
J  93.5% (58/62)    IGHJ6*02     1    ----------------------------------------------------------.....T....C.....................  32

                                                                    
                                       G  Q  G  T  T  V  I  V  S  S 
                    Query_13337  364  GGCCAAGGGACCACGGTCATCGTCTCTTCA  393
J  93.5% (58/62)    IGHJ6*02     33   ...................C......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40919688


Query= Query_62364

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           282     4e-78
IGHD3-10*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTTTCGTTTATGAG	GGTTCGGGGA	ACCCTCCCGAAG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTTTCGTTTATGAGGGTTCGGGGAACCCTCCCGAAGGACTCC	ARLSFMRVRGTLPKDS	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	62	33	25	5	3	75.8
FR2-IMGT	63	113	51	46	5	0	90.2
CDR2-IMGT	114	134	21	17	4	0	81
FR3-IMGT	135	248	114	104	10	0	91.2
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	250	217	30	3	86.8


Alignments

                                      <--------FR1-IMGT--------><-----------CDR1-IMGT-----------><--------------------FR2-IMGT--
                                         L  R  L  S  C  S  V  S  G  V  S  V  S  N  S  I  G  S  Y  W  S  W  I  R  Q  P  P  G  Q  
                    Query_13338  4    CCCTGAGACTCTCCTGTAGTGTCTCTGGTGTCTCCGTCAGCAACAGTATTGGTTCCTATTGGAGCTGGATCCGGCAGCCCCCAGGTCAGG  93
V  86.8% (217/250)  IGHV4-61*08  50   .....TCC...A....C.C...........G...........---..GG.....A...C..........................GA...  136
                                         L  S  L  T  C  T  V  S  G  G  S  V  S     S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  

                                      -------------------><-----CDR2-IMGT-----><------------------------------------------------
                                      G  L  E  Y  I  G  Y  I  Y  H  T  G  G  A  N  Y  N  P  S  L  Q  N  R  V  T  I  S  V  D  T  
                    Query_13338  94   GACTGGAATACATTGGGTATATCTATCACACTGGGGGCGCCAATTACAACCCCTCCCTCCAGAATCGAGTCACCATATCTGTAGACACGT  183
V  86.8% (217/250)  IGHV4-61*08  137  .......G.GG...............T...G....A..A....C...............A...G...............A..........  226
                                      G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  

                                      ----FR3-IMGT----------------------------------------------------><-------------------CDR3-
                                      S  K  N  Q  F  S  L  S  L  T  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  L  S  F  M  R  V  
                    Query_13338  184  CCAAGAACCAGTTCTCCCTGAGCCTAACCTCTGTGAGCGCTGCGGACACGGCCGTGTATTATTGTGCGAGGCTTTCGTTTATGAGGGTTC  273
V  86.8% (217/250)  IGHV4-61*08  227  .....................AG..G.G........C........................C........--------------------  296
                                      S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                       
D  100.0% (10/10)   IGHD3-10*01  11   -------------------------------------------------------------------------------------.....  15

                                      IMGT------------------>                                  
                                      R  G  T  L  P  K  D  S  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_13338  274  GGGGAACCCTCCCGAAGGACTCCTGGGGCCAGGGATCCCTGGTCATCGTCTCCTCAG  330
D  100.0% (10/10)   IGHD3-10*01  16   .....----------------------------------------------------  20
J  92.5% (37/40)    IGHJ4*02     9    -----------------....A.............A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_62363

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         389     2e-110
IGHD4-4*01                                                                                            14.1    9.4   
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD4-4*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATAGAGAC	GACTATAGTA	CGTCGTCCTC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATAGAGACGACTATAGTACGTCGTCCTCCGACCCC	ARHRDDYSTSSSDP	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	269	20	0	93.1


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  A  N  H
                    Query_13339    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCAGGATACAGCTTTGCTAATCA  90
V  93.1% (269/289)  IGHV5-10-1*01  6    .....................................................................T............A.C.GCT.  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  M  L  D  P  S  D  S  Y  S  N  Y  S  P
                    Query_13339    91   CTGGATCACCTGGGTCCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGATGCTTGATCCCAGTGACTCTTATAGCAACTACAGTCC  180
V  93.1% (269/289)  IGHV5-10-1*01  96   ........G......G......A..............................G.A.......T.............C.........C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  F  S  A  D  K  T  I  N  T  A  Y  L  H  W  S  S  L  K  A  S  D  T  A
                    Query_13339    181  GTCCTTCCAAGGCCACGTCACCTTCTCAGCTGACAAGACCATCAACACTGCCTACCTACATTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.1% (269/289)  IGHV5-10-1*01  186  ......................A..............T......G............G..G.............................  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><----------------CDR3-IMGT--------------->                                  
                                          I  Y  Y  C  A  R  H  R  D  D  Y  S  T  S  S  S  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13339    271  CATATATTACTGTGCGAGACATAGAGACGACTATAGTACGTCGTCCTCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  93.1% (269/289)  IGHV5-10-1*01  276  ...G...............----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                       
D  90.0% (9/10)     IGHD4-4*01     2    ----------------------------.....C....---------------------------------------------------  11
J  100.0% (41/41)   IGHJ5*02       11   ------------------------------------------------.........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_62362

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD5-18*01                                                                                           21.8    0.041
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGAA	GTGGATACAACTTTGGT	CAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGAAGTGGATACAACTTTGGTCATAACTGGTTCGACCCC	ARDPTGSGYNFGHNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  H  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13340  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATAAGTCATTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  93.5% (229/245)  IGHV4-59*01  49   ...............................G......C...AG............C................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  T  S  V  D  T  T  K  N 
                    Query_13340  91   TGGATTGGATATATCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCACGTCAGTAGACACGACCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G......T...................................................TA............T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  S  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_13340  181  CAGTTCTCCCTGAGCCTCAGTTCTGTGACCGTTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCCTACCGGAAGTGGATACAACTTT  270
V  93.5% (229/245)  IGHV4-59*01  229  .............AG..G..C..........C.................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.2% (15/17)    IGHD5-18*01  1    ----------------------------------------------------------------------------.........G..A.  14

                                      -------------------->                                  
                                       G  H  N  W  F  D  P  W  G  *  G  T  L  V  T  V  S  S  
                    Query_13340  271  GGTCATAACTGGTTCGACCCCTGGGGCTAGGGAACCCTGGTAACCGTCTCCTCAG  325
D  88.2% (15/17)    IGHD5-18*01  15   ...----------------------------------------------------  17
J  95.9% (47/49)    IGHJ5*02     3    ------.....................C.............C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_62361

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            344     6e-97
IGHD3-16*02                                                                                           39.1    3e-07
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCAA	GAATTGGGCGTTC	TGATTACCTTTGGGGGAGTTATC	CCA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAATTGGGCGTTCTGATTACCTTTGGGGGAGTTATCCCAAC	ARIGRSDYLWGSYPN	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_13341  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACATTTGATGATTATGCCATGCACTGGGTCCGGCAAGTTCCAGGGAAGGGCCTAG  90
V  94.7% (233/246)  IGHV3-9*01   47   .....................................C..................................C...............G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  W  D  S  G  K  K  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13341  91   AATGGGTCTCAAGTATTAGTTGGGATAGTGGTAAGAAACACTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.7% (233/246)  IGHV3-9*01   137  .G.........G...........A.........GC.T.GG..................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  I  G  R  S  D  Y  L  
                    Query_13341  181  AGAACTCCCTCTTTCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCTTGTATTACTGTGCAAGAATTGGGCGTTCTGATTACCTTT  270
V  94.7% (233/246)  IGHV3-9*01   227  ..........G.A.....................................................------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                          
D  95.7% (22/23)    IGHD3-16*02  7    -------------------------------------------------------------------------------.......G...  17

                                      ---------------->                                  
                                      W  G  S  Y  P  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13341  271  GGGGGAGTTATCCCAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  95.7% (22/23)    IGHD3-16*02  18   ............---------------------------------------  29
J  100.0% (36/36)   IGHJ4*02     13   ---------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_289902

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           336     1e-94
IGHD6-6*01                                                                                            23.8    0.011
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACCAC	TC	ATAGCAGCTCGT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCACTCATAGCAGCTCGTACTACTTTGACTAC	TTHSSSYYFDY	249	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	13	11	0	54.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	30	0	0	100
FR3-IMGT	135	248	114	110	4	0	96.5
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	234	19	0	92.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13342  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCGACTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGG  90
V  92.5% (234/253)  IGHV3-15*01  47   .......T.............................T..C.GTA..GCCTGG..........................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  A  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  V  S  R  D  
                    Query_13342  91   AGTGGGTCGCCCGTATTAAAAGCAAAACTGATGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCGTCTCAAGAGATG  180
V  92.5% (234/253)  IGHV3-15*01  137  .......T.G...................................................................A............  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-
                                      D  L  K  N  T  L  Y  L  Q  M  N  S  L  K  I  E  D  T  A  V  Y  Y  C  T  T  H  S  S  S  Y  
                    Query_13342  181  ATTTAAAAAACACGCTGTATCTGCAAATGAACAGCCTGAAAATCGAGGACACAGCCGTGTATTATTGTACCACTCATAGCAGCTCGTACT  270
V  92.5% (234/253)  IGHV3-15*01  227  ...C......................................C.....................C........-----------------  299
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (12/12)   IGHD6-6*01   5    ---------------------------------------------------------------------------............---  16
J  100.0% (48/48)   IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13342  271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (48/48)   IGHJ4*02     4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_62360

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           413     2e-117
IGHD6-19*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD6-19*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCCTTAGGGTC	TATAGCAGTGGCTGGTAC	TC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCCTTAGGGTCTATAGCAGTGGCTGGTACTCTTGGCTAC	ESSLRVYSSGWYSWL	292	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	78	76	74	1	1	97.4
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	108	6	0	94.7
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	296	282	13	1	95.3


Alignments

                                      <---------------------------------FR1-IMGT---------------------------------><-------CDR1-I
                                       Q  V  Q  L  V  Q  V  W  S  *  G  E  E  A  W  G  L  S  E  G  L  L  Q  G  F  W  L  H  L  Y 
                    Query_13343  3    CAGGTGCAGCTGGTGCAAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTAC  92
V  95.3% (282/296)  IGHV1-18*01  1    .....T...........-........................................................................  89
                                       Q  V  Q  L  V  Q   S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T

                                      MGT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----
                                       Q  L  W  Y  Q  L  G  A  T  G  P  W  T  R  A  *  V  D  G  L  D  Q  R  F  Q  W  *  H  K  T 
                    Query_13343  93   CAATTATGGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGCTGGATCAGCGTTTTCAATGGTAACACAAGACA  182
V  95.3% (282/296)  IGHV1-18*01  90   ..GC...........C.........................................A..........C..A..............ACT.  179
                                        S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y

                                      ------------------------------------------------FR3-IMGT----------------------------------
                                       C  T  E  A  P  G  Q  S  H  H  D  H  R  H  I  H  E  H  S  L  H  G  A  E  E  P  E  I  *  R 
                    Query_13343  183  TGCACTGAAGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAACACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGG  272
V  95.3% (282/296)  IGHV1-18*01  180  .....A............................................G......................................A  269
                                        A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D

                                      ------------------><-------------------CDR3-IMGT------------------>                       
                                       H  G  R  V  L  L  C  E  S  S  L  R  V  Y  S  S  G  W  Y  S  W  L  L  G  P  G  N  P  G  H 
                    Query_13343  273  CACGGCCGTGTATTACTGTGCGAGAGTTCCCTTAGGGTCTATAGCAGTGGCTGGTACTCTTGGCTACTGGGGCCAGGGAACCCTGGTCAT  362
V  95.3% (282/296)  IGHV1-18*01  270  ..........................----------------------------------------------------------------  295
                                        T  A  V  Y  Y  C  A  R                                                                  
D  100.0% (18/18)   IGHD6-19*01  4    ---------------------------------------..................---------------------------------  21
J  92.9% (39/42)    IGHJ4*02     7    -----------------------------------------------------------...A..........................C  37

                                                 
                                       C  L  L   
                    Query_13343  363  TGTCTCCTCAG  373
J  92.9% (39/42)    IGHJ4*02     38   C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_120617

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           352     3e-99
IGHD6-19*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	GTAGAGG	GCAGTGGCTGG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTAGAGGGCAGTGGCTGGAACTAC	ARVEGSGWNY	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  G  S  T  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_13344  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCGGCAGTACTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  95.2% (237/249)  IGHV4-39*01  49   ..................A....................A......G..........................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  I  D  T  S 
                    Query_13344  91   CTGGAGTGGATTGGGAGTATCTATTACAGTGGGAGCACCTATTACAACCCGTCCCTCAAGAGTCGACTCACCATATCCATAGACACGTCC  180
V  95.2% (237/249)  IGHV4-39*01  139  ..........................T..............C........................G...........G...........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       E  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  V  E  G  S  G  W  N 
                    Query_13344  181  GAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCAGACACGGCTATCTATTACTGTGCCAGAGTAGAGGGCAGTGGCTGGAAC  270
V  95.2% (237/249)  IGHV4-39*01  229  A..................................................G.G...........G...---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD6-19*01  8    ----------------------------------------------------------------------------...........---  18
J  97.4% (38/39)    IGHJ4*02     10   ----------------------------------------------------------------------------------------..  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  I  S  S  
                    Query_13344  271  TACTGGGGCCAGGGAACCCTGGTCACCATCTCCTCAG  307
J  97.4% (38/39)    IGHJ4*02     12   ...........................G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_211451

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           350     8e-99
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TATCTACGAGGCGAGTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAAAGATATCTACGAGGCGAGTCATCAATATAGTGGCTACATGATTAATGACTAT	GKDIYEASHQYSGYMINDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13345  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGATATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-23*01  47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  G  I  S  E  S  G  G  S  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13345  91   ATTGGGTCTCAGGCATTAGTGAAAGTGGTGGTAGCACAAACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATGCCA  180
V  94.8% (237/250)  IGHV3-23*01  137  .G..........CT.......GT...............T...............................................T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  I  S  L  R  A  E  D  T  A  V  Y  Y  C  G  K  D  I  Y  E  A  S  H  
                    Query_13345  181  AGAACACCCTGTATCTACAAATGATCAGCCTCAGAGCCGAGGACACGGCCGTATATTACTGTGGGAAAGATATCTACGAGGCGAGTCATC  270
V  94.8% (237/250)  IGHV3-23*01  227  .......G........G.......A......G...............................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_13345  271  AATATAGTGGCTACATGATTAATGACTATTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  95.1% (39/41)    IGHJ4*02     8    ----------------------......C......................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_79370

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           335     4e-94
IGHD5-12*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTAC	GTGGATATAG	ATC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTACGTGGATATAGATCCTACTTTGACTCC	ARLRGYRSYFDS	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	228	14	0	94.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  F  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_13346  4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTTCTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  94.2% (228/242)  IGHV4-34*01  50   .....TCC...A.................................A............................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  T  S  R  V  T  V  S  V  D  T  S  K  N  
                    Query_13346  94   GGATTGCAGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTCACGAGTCGGGTCACCGTATCAGTAGACACGTCCAAGAACC  183
V  94.2% (228/242)  IGHV4-34*01  140  ......GG...........................................A......A......A........................  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  L  R  G  Y  R  S  Y  F  D  
                    Query_13346  184  AGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCGGACACCGCTTTATATTACTGTGCGAGATTACGTGGATATAGATCCTACTTTGACT  273
V  94.2% (228/242)  IGHV4-34*01  230  ............A...........................G...G.G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD5-12*01  1    ------------------------------------------------------------------..........--------------  10
J  91.3% (42/46)    IGHJ4*02     2    -------------------------------------------------------------------------------...........  12

                                      ->                                 
                                      S  W  G  R  G  T  L  V  T  V  S  S 
                    Query_13346  274  CCTGGGGCCGGGGCACCCTGGTCACCGTCTCGTCA  308
J  91.3% (42/46)    IGHJ4*02     13   A........A...A.................C...  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_79371

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           285     4e-79
IGHD4-4*01                                                                                            19.9    0.14 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AATCAGC	CAGTAACTAC	TCTCGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAATCAGCCAGTAACTACTCTCGGCTAC	ARNQPVTTLGY	235	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	47	4	0	92.2
CDR2-IMGT	100	120	21	15	6	0	71.4
FR3-IMGT	121	234	114	104	10	0	91.2
CDR3-IMGT (germline)	235	240	6	6	0	0	100
Total	N/A	N/A	228	205	23	0	89.9


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  V  T  V  S  N  N  Y  M  T  W  V  R  Q  A  P  G  K  G  L  E  W  L  S  V  M 
                    Query_13347  13   TGTGCAGCCTCTGGGGTCACCGTCAGTAACAACTATATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGCTCTCAGTCATG  102
V  89.9% (205/228)  IGHV3-53*01  64   ...............T............G......C....GC....................................G.......T..T  153
                                       C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I 

                                      ---CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-----------
                                       Y  S  R  G  A  T  R  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  S  S  K  N  T  V  Y  L  Q 
                    Query_13347  103  TATAGTCGTGGAGCCACAAGGTACGCAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAGTTCCAAGAACACGGTGTATCTTCAA  192
V  89.9% (205/228)  IGHV3-53*01  154  .....CG....TAG....TAC................A..........................A.............C...........  243
                                       Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 

                                      -----------------------------------------><-----------CDR3-IMGT----------->               
                                       M  K  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  N  Q  P  V  T  T  L  G  Y  W  G  P  G  T 
                    Query_13347  193  ATGAAAAACCTGAGAGTCGAGGACACGGCCGTCTATTACTGTGCGAGAAATCAGCCAGTAACTACTCTCGGCTACTGGGGCCCGGGAACC  282
V  89.9% (205/228)  IGHV3-53*01  244  .....C.G........C...............G...............------------------------------------------  291
                                       M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                           
D  100.0% (10/10)   IGHD4-4*01   7    -------------------------------------------------------..........-------------------------  16
J  97.4% (37/38)    IGHJ4*02     11   -----------------------------------------------------------------------...........A.......  29

                                                         
                                       L  V  T  V  S  S  
                    Query_13347  283  CTGGTCACCGTCTCCTCAG  301
J  97.4% (37/38)    IGHJ4*02     30   ...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_79372

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           420     7e-120
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              56.4    4e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCGGGGCTGGGAAGA	TATAGCAGGGGCTGG	CGATG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGCTGGGAAGATATAGCAGGGGCTGGCGATGC	ARAGLGRYSRGWRC	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  Y
                    Query_13348  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGTTTTACCAACTA  90
V  96.5% (279/289)  IGHV5-51*03  6    ..............................................................................C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_13348  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGCGACTCTGATACCAGATACAGTCC  180
V  96.5% (279/289)  IGHV5-51*03  96   ..................................................................T....................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  V  D  E  S  I  S  T  A  F  L  Q  W  S  S  L  K  A  S  G  P  A
                    Query_13348  181  GTCCTTCCAAGGCCAGGTCACCATGTCAGTCGACGAGTCCATCAGCACCGCCTTCCTGCAGTGGAGCAGCCTGAAGGCCTCGGGCCCCGC  270
V  96.5% (279/289)  IGHV5-51*03  186  ........................C....C....A..................A.............................A.A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  A  G  L  G  R  Y  S  R  G  W  R  C  W  G  Q  G  A  L  V  P  V  S  S  
                    Query_13348  271  CATGTATTACTGTGCGAGAGCGGGGCTGGGAAGATATAGCAGGGGCTGGCGATGCTGGGGCCAGGGAGCCCTGGTCCCCGTCTCCTCAG  359
V  96.5% (279/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  93.3% (14/15)    IGHD6-19*01  4    ----------------------------------........T......----------------------------------------  18
J  94.3% (33/35)    IGHJ4*02     14   ------------------------------------------------------.............A........A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_79375

Length=412
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            413     2e-117
IGHD3-22*01                                                                                           19.9    0.19  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CTCCTCC	TATTACTTTGATA	CTGCTGTGGCTGAGCCGAATGAA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCTCCTCCTATTACTTTGATACTGCTGTGGCTGAGCCGAATGAATACTACCAGTACGGCCTGGACGTC	ASSSYYFDTAVAEPNEYYQYGLDV	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	276	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  F  G  Y  S  F  T  G  Y
                    Query_13349  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTAAAGGTCTCCTGCAAGGCTTTTGGATACAGCTTCACCGGCTA  90
V  95.8% (276/288)  IGHV1-2*04   6    ..................G.............................G...................C........C............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  L  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  R  G  G  T  N  Y  A  Q
                    Query_13349  91   CTATATGCACTGGTTGCGACAGGCCCCTGGACAAGGCCTTGAGTGGATGGGATGGATCAACCCTAACAGGGGTGGCACAAACTATGCACA  180
V  95.8% (276/288)  IGHV1-2*04   96   .............G......................G................................T....................  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  W  V  T  M  T  R  D  T  F  I  S  T  A  Y  M  E  L  S  R  F  R  S  D  D  P  A
                    Query_13349  181  GAAATTTCAGGGCTGGGTCACCATGACCAGGGACACGTTCATCAGCACAGCCTACATGGAGCTGAGCAGGTTCAGATCTGACGACCCGGC  270
V  95.8% (276/288)  IGHV1-2*04   186  ...G..................................C...............................C.G............A....  275
                                        K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  A

                                      ------------><-------------------------------CDR3-IMGT------------------------------>     
                                        V  Y  Y  C  A  S  S  S  Y  Y  F  D  T  A  V  A  E  P  N  E  Y  Y  Q  Y  G  L  D  V  W  G
                    Query_13349  271  CGTGTATTACTGTGCGAGCTCCTCCTATTACTTTGATACTGCTGTGGCTGAGCCGAATGAATACTACCAGTACGGCCTGGACGTCTGGGG  360
V  95.8% (276/288)  IGHV1-2*04   276  ..................------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  92.3% (12/13)    IGHD3-22*01  2    -------------------------.......A.....----------------------------------------------------  14
J  93.0% (53/57)    IGHJ6*02     6    -------------------------------------------------------------......T.C.....TA.............  34

                                                                  
                                        Q  G  T  T  V  T  V  S  S 
                    Query_13349  361  CCAAGGGACCACGGTCACCGTCTCCTCA  388
J  93.0% (53/57)    IGHJ6*02     35   ............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40393728


Query= Query_79376

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           355     3e-100
IGHD3-9*01                                                                                            29.5    2e-04 
IGHJ4*02                                                                                              62.2    6e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	CCGAG	TGACTGGTTATTATA	GCGG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGCCGAGTGACTGGTTATTATAGCGGC	ASRVTGYYSG	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13350  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAACTACTGGATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (237/247)  IGHV3-74*01  47   .............................................G........................A...................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  Y  G  T  T  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13350  91   TGTGGGTCTCACGTATCAATAGTTATGGGACTACCACAAACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (237/247)  IGHV3-74*01  137  ................T......G......G..G.....G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  R  V  T  G  Y  Y  S  
                    Query_13350  181  AGAACACGCTGTATCTGCAGATGAACAGTCTGAGAGCCGAGGACACGGCTGTATACTACTGTGCAAGCCGAGTGACTGGTTATTATAGCG  270
V  96.0% (237/247)  IGHV3-74*01  227  ...................A................................G..T...........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (15/15)   IGHD3-9*01   15   ------------------------------------------------------------------------...............---  29

                                      ->                                  
                                      G  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13350  271  GCTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  306
J  97.1% (34/35)    IGHJ4*02     14   -..................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_79377

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           285     4e-79
IGHD5-12*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	GATACAGTGG	GGCCCCATCTGAGGAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGTGGGGCCCCATCTGAGGAATTTGACTAC	ARYSGAPSEEFDY	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	24	15	6	3	62.5
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	243	4	4	0	0	100
Total	N/A	N/A	246	216	27	3	87.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  A  Y  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13351  1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCACCTTTGCCTACTATGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  87.8% (216/246)  IGHV3-23*01  47   .......................G.................AG.AG............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  I  T  S     D  G  H  T  F  H  A  D  P  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13351  91   AGTGGGTCTCAACTATTACTTCT---GATGGTCACACATTCCACGCGGACCCCGTAAAGGGCCGCTTCACCATCTCCAGAGACAATTCCA  177
V  87.8% (216/246)  IGHV3-23*01  137  ...........G......G.GG.AGT.G....AG.....A.T....A...T....G........G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  F  C  A  R  Y  S  G  A  P  S  E  
                    Query_13351  178  AGAATACTCTGTATCTCCAAATGAACAGCCTCAGAGCCGACGACACGGCCGTCTACTTCTGTGCGAGATACAGTGGGGCCCCATCTGAGG  267
V  87.8% (216/246)  IGHV3-23*01  227  ....C..G........G..............G........G...........A..T.A........------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.0% (9/10)     IGHD5-12*01  4    ------------------------------------------------------------------....T.....--------------  13

                                      ---------->                                  
                                      E  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13351  268  AATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (43/43)   IGHJ4*02     6    --...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_142099

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           343     2e-96
IGHD6-19*01                                                                                           18.0    0.64 
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGACA	TTCTGTGG	GCAGTGCCTGGT	CGTTTGGTCCCCCCCCCCGACTCTACTTCCTC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTCTGTGGGCAGTGCCTGGTCGTTTGGTCCCCCCCCCCGACTCTACTTCCTCGACTTC	AGHSVGSAWSFGPPPRLYFLDF	250	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	135	27	21	0	6	77.8
FR3-IMGT	136	249	114	106	8	0	93
CDR3-IMGT (germline)	250	257	8	7	1	0	87.5
Total	N/A	N/A	257	240	11	6	93.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  H  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_13352  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGCAGTTACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.4% (240/257)  IGHV4-39*01  49   ...............................................T......T...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  N  T  N  Y  N  P  S  L  K  S  R  V  T  M  S  V  D 
                    Query_13352  91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCAACACCAACTACAACCCGTCCCTCAAGAGTCGAGTAACCATGTCGGTAGAC  180
V  93.4% (240/257)  IGHV4-39*01  139  ...................................------....T............................C.....A..C......  222
                                       L  E  W  I  G  S  I  Y  Y  S  G  S        T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------------
                                       T  S  K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  T  Y  Y  C  A  G  H  S  V  G  S 
                    Query_13352  181  ACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCCGCAGACACGGCTACATATTACTGTGCGGGACATTCTGTGGGCAGT  270
V  93.4% (240/257)  IGHV4-39*01  223  ................................C........................GTG............A....-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  91.7% (11/12)    IGHD6-19*01  8    -------------------------------------------------------------------------------------.....  12

                                      --------CDR3-IMGT--------------------------->                                  
                                       A  W  S  F  G  P  P  P  R  L  Y  F  L  D  F  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_13352  271  GCCTGGTCGTTTGGTCCCCCCCCCCGACTCTACTTCCTCGACTTCTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  349
D  91.7% (11/12)    IGHD6-19*01  13   .G.....------------------------------------------------------------------------  19
J  95.0% (38/40)    IGHJ4*02     9    ---------------------------------------....A..............C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_142098

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           304     1e-84
IGHD6-19*01                                                                                           10.3    123  
IGHJ6*02                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	ATCGCATCTCAG	GCAGT	TGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAATCGCATCTCAGGCAGTTGTTCTACTACGACGGTATGGACGTC	AKESHLRQLFYYDGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	222	28	0	88.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  L  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13353  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACCTCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  88.8% (222/250)  IGHV3-23*01  47   ..........................................G.AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  T  S  S  G  G  I  S  P  R  Y  A  D  S  F  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13353  91   AGTGGGTCTCTTCTACTAGTAGTGGTGGTATTAGTCCACGCTACGCCGACTCCTTCAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  88.8% (222/250)  IGHV3-23*01  137  ..........AG...T....G..A.....GG...CA..TA......A......G.G..................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  M  L  W  L  H  M  T  S  L  T  V  D  D  T  A  I  Y  Y  C  A  K  E  S  H  L  R  Q  L  
                    Query_13353  181  AGAACATGCTGTGGCTGCATATGACCAGCCTGACAGTCGACGACACGGCCATTTATTACTGTGCGAAAGAATCGCATCTCAGGCAGTTGT  270
V  88.8% (222/250)  IGHV3-23*01  227  ......C.....AT.....A....A........G..C...G.........G.A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD6-19*01  8    ----------------------------------------------------------------------------------.....---  12

                                      GT-------------------->                                 
                                      F  Y  Y  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13353  271  TCTACTACGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  98.2% (54/55)    IGHJ6*02     8    -.......T...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_244692

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*01                                                                                           344     6e-97
IGHD2-2*01                                                                                            35.3    4e-06
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	ATTGTACTAGTACCAGGTGCTATG	GGGGA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGACATTGTACTAGTACCAGGTGCTATGGGGGATTTGACTTC	TRHCTSTRCYGGFDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  S  L  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13354  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCAGCCTCAGTAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGG  90
V  94.4% (234/248)  IGHV3-64*01  47   .....................C..............C.T.......C......................................A....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  S  D  G  G  T  T  Y  Y  A  N  S  V  K  G  R  F  A  I  S  R  D  N  S  
                    Query_13354  91   AATATGTTTCAGCTATTAGTAGTGATGGGGGTACCACATATTATGCAAACTCTGTGAAGGGCAGATTCGCCATCTCCAGAGACAACTCCA  180
V  94.4% (234/248)  IGHV3-64*01  137  .......................A.........G..................................A................T....  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  N  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  F  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  T  R  H  C  T  S  T  R  C  
                    Query_13354  181  AGAACACGCTGTTCCTTCAAATGGGAAGCCTGAGAGCTGAGGACATGGCTGTCTATTACTGTACGAGACATTGTACTAGTACCAGGTGCT  270
V  94.4% (234/248)  IGHV3-64*01  227  ............AT...........C..........................G.........G.....----------------------  294
                                      K  N  T  L  Y  L  Q  M  G  S  L  R  A  E  D  M  A  V  Y  Y  C  A  R                       
D  91.7% (22/24)    IGHD2-2*01   6    ---------------------------------------------------------------------......G.........C....  26

                                      ---------------->                                  
                                      Y  G  G  F  D  F  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_13354  271  ATGGGGGATTTGACTTCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  321
D  91.7% (22/24)    IGHD2-2*01   27   ...------------------------------------------------  29
J  95.3% (41/43)    IGHJ4*02     6    --------.......A.............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_244694

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           297     7e-83
IGHD4-4*01                                                                                            18.0    0.55 
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AATAAGAGATTC	GACTACAGT	TAT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAAAAATAAGAGATTCGACTACAGTTATTAC	TKNKRFDYSYY	232	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	9	2	0	81.8
CDR1-IMGT	19	42	24	22	2	0	91.7
FR2-IMGT	43	93	51	48	3	0	94.1
CDR2-IMGT	94	117	24	18	6	0	75
FR3-IMGT	118	231	114	108	6	0	94.7
CDR3-IMGT (germline)	232	237	6	5	1	0	83.3
Total	N/A	N/A	230	210	20	0	91.3


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  I  T  F  S  S  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  T  I  
                    Query_13355  8    GTGCAGTCTCCGGAATCACCTTTAGCAGCTTTGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCAACTATTA  97
V  91.3% (210/230)  IGHV3-23*01  65   ......C...T...T...............A................................................CT..G......  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  A  V  A  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  V  Y  L  
                    Query_13355  98   GCGGTAGTGCAGTTGCCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACGGTGTATCTGC  187
V  91.3% (210/230)  IGHV3-23*01  155  .T.......GT.G.AG................................................................C.........  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------CDR3-IMGT----------->             
                                      Q  M  N  A  L  R  A  E  D  T  A  V  Y  Y  C  T  K  N  K  R  F  D  Y  S  Y  Y  W  G  Q  G  
                    Query_13355  188  AAATGAACGCCCTGAGAGCCGAGGACACGGCCGTTTACTACTGCACGAAAAATAAGAGATTCGACTACAGTTATTACTGGGGCCAGGGAA  277
V  91.3% (210/230)  IGHV3-23*01  245  ........AG........................A..T.....TG.....----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (9/9)     IGHD4-4*01   2    --------------------------------------------------------------.........-------------------  10
J  94.6% (35/37)    IGHJ4*02     12   --------------------------------------------------------------------------................  27

                                                           
                                      T  L  V  S  V  S  S  
                    Query_13355  278  CCCTGGTCTCGGTCTCCTCAG  298
J  94.6% (35/37)    IGHJ4*02     28   ........A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_244697

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     3e-115
IGHD6-25*01                                                                                           14.1    9.4   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAGG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTC	ARQSSAGRTRYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  D  Y
                    Query_13356  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGCTCTGGATTCGACTTTACCGACTA  90
V  94.5% (275/291)  IGHV5-51*01  6    ....................................C.............................T.......A.AG.......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  K  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_13356  91   CTGGATCGTCTGGGTGCGCCAGAAGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACGAGATACAGTCC  180
V  94.5% (275/291)  IGHV5-51*01  96   ........G..............T......................................................C........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  R  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_13356  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCCGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  94.5% (275/291)  IGHV5-51*01  186  .............................C.............A.......................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  F  C  A  R  Q  S  S  A  G  R  T  R  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_13356  271  CATGTATTTTTGTGCGAGACAAAGCAGCGCTGGCAGGACCAGGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTC  360
V  94.5% (275/291)  IGHV5-51*01  276  ........AC...........---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-25*01  7    ----------------------.......-------------------------------------------------------------  13
J  97.9% (47/48)    IGHJ6*02     15   -------------------------------------------............................................C..  61

                                       
                                       
                    Query_13356  361  A  361
J  97.9% (47/48)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_142091

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD6-6*01                                                                                            14.1    9.5   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CGACTAGAGAACAA	CTCGTCC	CGATT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTC	ATTREQLVPIFDF	292	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	71	3	0	95.9
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	106	8	0	93
CDR3-IMGT (germline)	292	295	4	4	0	0	100
Total	N/A	N/A	291	271	20	0	93.1


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  R  L  S  
                    Query_13357  5    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATTTCCTGTAAGGGTTCTGGATACAGATTAAGCA  94
V  93.1% (271/291)  IGHV5-51*01  2    ....G........G............................................C.......................C..T.C..  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  V  Y  P  G  D  S  E  T  K  Y  
                    Query_13357  95   GTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCGTCTATCCTGGTGACTCTGAGACCAAATACA  184
V  93.1% (271/291)  IGHV5-51*01  92   .C..C.......G..........................................G...A...................T....G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  A  S  G  T  A  F  L  Q  W  D  S  L  K  A  S  D  
                    Query_13357  185  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGGCCAGCGGCACCGCCTTCCTGCAGTGGGACAGCCTGAAGGCCTCGGACA  274
V  93.1% (271/291)  IGHV5-51*01  182  ...........C.............................T...T.A.........A..........AG....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  A  M  Y  Y  C  A  T  T  R  E  Q  L  V  P  I  F  D  F  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_13357  275  CCGCCATGTATTACTGTGCGACGACTAGAGAACAACTCGTCCCGATTTTTGACTTCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  364
V  93.1% (271/291)  IGHV5-51*01  272  .....................---------------------------------------------------------------------  292
                                      T  A  M  Y  Y  C  A                                                                       
D  100.0% (7/7)     IGHD6-6*01   12   -----------------------------------.......------------------------------------------------  18
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------.......A......................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_244699

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     3e-93
IGHD2-21*02                                                                                           31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCGT	GCATTTTGTGGTGATGACTGCT	TCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGTGCATTTTGTGGTGATGACTGCTTCCCCTTTGACTAC	ARRAFCGDDCFPFDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	227	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  F  N  I  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13358  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCTTCAACATTTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.8% (227/242)  IGHV4-59*08  49   ....................................A...GT.G............C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  T  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  S  S  K  N 
                    Query_13358  91   TGGATTGGGTATATCTCTTACAGTGGGACCACCAACTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGTAGACTCGTCCAAGAAT  180
V  93.8% (227/242)  IGHV4-59*08  139  ................A...........G......................A..........................A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  V  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  R  A  F  C  G  D  D  C  F 
                    Query_13358  181  CAGGTCTCCCTGAAACTGACCTCTGTGACCGCCGCAGACACGGCCATATATTACTGTGCGAGGCGTGCATTTTGTGGTGATGACTGCTTC  270
V  93.8% (227/242)  IGHV4-59*08  229  ...T..........G....G.........................G.G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (20/22)    IGHD2-21*02  2    ------------------------------------------------------------------....A........G........--  23

                                      ----------->                                  
                                       P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13358  271  CCCTTTGACTACTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  316
J  97.7% (43/44)    IGHJ4*02     5    --..............................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_142092

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           361     4e-102
IGHD6-19*01                                                                                           16.1    2.1   
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	CG	GTGGCTGG	GTCGGTAAGGGG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGCGGTGGCTGGGTCGGTAAGGGGGACTAC	ASGGWVGKGDY	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	239	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  Y  W  I  H  W  V  R  Q  A  P  G  K  G  P  
                    Query_13359  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTATTACTGGATACACTGGGTCCGCCAAGCTCCAGGGAAGGGGCCGA  90
V  96.8% (239/247)  IGHV3-74*01  47   ............................................AGC........G...............................T.G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      M  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13359  91   TGTGGGTCTCACGTATTAATAGTGATGGGAGTAGCACAAGTTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (239/247)  IGHV3-74*01  137  ........................................C.................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  S  G  G  W  V  G  K  G  
                    Query_13359  181  AGAACACGGTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGCGGTGGCTGGGTCGGTAAGGGGG  270
V  96.8% (239/247)  IGHV3-74*01  227  ........C..........................................................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD6-19*01  11   ---------------------------------------------------------------------........-------------  18
J  100.0% (40/40)   IGHJ4*02     9    -----------------------------------------------------------------------------------------.  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13359  271  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (40/40)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_142095

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           364     5e-103
IGHD2-15*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGC	ATTGTAATGGT	AACAGGTGTTGGGG	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGCATTGTAATGGTAACAGGTGTTGGGGCGTC	ARDRHCNGNRCWGV	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	111	3	0	97.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	240	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13360  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAACAACTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (240/247)  IGHV3-53*01  47   .............................................G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  L  I  Y  S  G  G  T  T  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  R  
                    Query_13360  91   AGTGGGTCTCACTTATTTATAGCGGTGGTACCACACACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGA  180
V  97.2% (240/247)  IGHV3-53*01  137  ...........G..................G....T...................................................A..  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  D  R  H  C  N  G  N  R  
                    Query_13360  181  ACACGCTGTATCTTCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGATAGGCATTGTAATGGTAACAGGT  270
V  97.2% (240/247)  IGHV3-53*01  227  .................................C.................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  90.9% (10/11)    IGHD2-15*01  6    ------------------------------------------------------------------------......G....-------  16

                                      ---------->                                 
                                      C  W  G  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13360  271  GTTGGGGCGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  314
J  100.0% (37/37)   IGHJ6*02     26   -------.....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_142094

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           277     9e-77
IGHD1-26*01                                                                                           18.0    0.61 
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACGAG	CCGGCCCGATGAGTGGGGCAATGAG	GTGGGATCTACT	TCAACT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGCCGGCCCGATGAGTGGGGCAATGAGGTGGGATCTACTTCAACTTACTTTGACTAT	TSRPDEWGNEVGSTSTYFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	212	35	0	85.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  V  S  G  F  S  F  E  T  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13361  1    GGTCCCTGAGACTCTCCTGTGTCGTCTCTGGATTCAGCTTCGAAACTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGC  90
V  85.8% (212/247)  IGHV3-30*04  47   .....................CA.C...........C....AGT.GC......................................G...G  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      Q  W  M  A  L  I  S  Y  D  E  D  V  K  K  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13361  91   AGTGGATGGCTCTTATATCTTATGATGAGGATGTTAAAAAGTATGCCGCCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  85.8% (212/247)  IGHV3-30*04  137  .....G....AG.......A.......GAAG.AA....T.C..C..A.A.........................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  Q  M  N  S  L  T  I  E  D  T  A  I  Y  Y  C  T  S  R  P  D  E  W  G  N  
                    Query_13361  181  AGAACACTCTCTATCTGCAGATGAACAGCCTGACAATTGAGGACACGGCTATATATTACTGTACGAGCCGGCCCGATGAGTGGGGCAATG  270
V  85.8% (212/247)  IGHV3-30*04  227  .......G..G........A.............G.GC.............G.G.........G....-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          

                                      R3-IMGT------------------------>                                  
                                      E  V  G  S  T  S  T  Y  F  D  Y  W  G  Q  G  T  L  V  T  F  S  S  
                    Query_13361  271  AGGTGGGATCTACTTCAACTTACTTTGACTATTGGGGCCAGGGGACCCTGGTCACCTTCTCCTCAG  336
D  91.7% (11/12)    IGHD1-26*01  7    --......G.....----------------------------------------------------  18
J  93.5% (43/46)    IGHJ4*02     3    --------------------...........C...........A............G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_142097

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           343     2e-96
IGHD6-6*01                                                                                            23.8    0.010
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTAAG	GG	TAGCAGCTCGTC	TTCGG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGGGTAGCAGCTCGTCTTCGG	VRVAARLR	243	266	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13362  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  94.3% (233/247)  IGHV3-74*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  N  T  T  F  Y  A  D  S  V  K  G  R  F  T  M  S  R  D  N  A  
                    Query_13362  91   TGTGGGTCTCACGCATTAATAGTGATGGCAATACTACATTCTACGCGGACTCCGTGAAGGGCCGATTCACCATGTCCAGAGACAACGCCA  180
V  94.3% (233/247)  IGHV3-74*01  137  .............T..............G.G..GC...AG.................................C................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------CDR3-IMGT------>    
                                      K  N  T  L  F  L  Q  M  T  S  L  R  A  D  D  T  A  V  Y  Y  C  V  R  V  A  A  R  L  R  W  
                    Query_13362  181  AGAACACGCTGTTTCTGCAAATGACGAGTCTGAGAGCCGACGACACGGCTGTATATTACTGTGTAAGGGTAGCAGCTCGTCTTCGGTGGG  270
V  94.3% (233/247)  IGHV3-74*01  227  ............A...........AC..............G...........G..........C...-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (12/12)   IGHD6-6*01   6    ---------------------------------------------------------------------............---------  17
J  97.1% (33/34)    IGHJ4*02     15   --------------------------------------------------------------------------------------....  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  P  
                    Query_13362  271  GCCAGGGAACCCTGGTCACCGTCTCCCCAG  300
J  97.1% (33/34)    IGHJ4*02     19   ..........................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_142096

Length=407
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           424     9e-121
IGHD3-16*01                                                                                           31.5    6e-05 
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCTAGC	ATTATGTTTACATTTGGGGGAG	AAACACACCGTCTGAC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAGCATTATGTTTACATTTGGGGGAGAAACACACCGTCTGACTGATGCTTTTGAGATC	ARASIMFTFGGETHRLTDAFEI	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	280	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  S  Y
                    Query_13363  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTAGCAGCTA  90
V  96.9% (280/289)  IGHV5-51*03  6    .............................................................................G.....C......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  E  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  G  P
                    Query_13363  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGGAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATACCAGATACGGGCC  180
V  96.9% (280/289)  IGHV5-51*03  96   ...............................A....................A................................A.C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13363  181  GTCCTTCGAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (280/289)  IGHV5-51*03  186  .......C................C.................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------------CDR3-IMGT--------------------------->           
                                        M  Y  Y  C  A  R  A  S  I  M  F  T  F  G  G  E  T  H  R  L  T  D  A  F  E  I  W  G  Q  G
                    Query_13363  271  CATGTATTACTGCGCGAGAGCTAGCATTATGTTTACATTTGGGGGAGAAACACACCGTCTGACTGATGCTTTTGAGATCTGGGGCCAAGG  360
V  96.9% (280/289)  IGHV5-51*03  276  ............T......-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  90.9% (20/22)    IGHD3-16*01  3    -------------------------......A....G..........-------------------------------------------  24
J  96.0% (48/50)    IGHJ3*02     1    ---------------------------------------------------------------............T..............  27

                                                             
                                        T  V  V  T  V  S  S  
                    Query_13363  361  GACAGTGGTCACCGTCTCTTCAG  383
J  96.0% (48/50)    IGHJ3*02     28   ....A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39867768


Query= Query_12010

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           400     8e-114
IGHD2-8*02                                                                                            12.2    34    
IGHJ4*02                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTGGGCCGTTGGCC	TACTGG	GTCT	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	166	21	17	4	0	81
FR3-IMGT	167	280	114	109	5	0	95.6
CDR3-IMGT (germline)	281	288	8	8	0	0	100
Total	N/A	N/A	288	272	16	0	94.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  T  N
                    Query_13364  1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCGTCAGTACCAA  90
V  94.4% (272/288)  IGHV3-53*01  6    ..........G.............................................................G.............G...  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        H  M  N  W  V  H  Q  A  P  G  K  G  L  E  W  V  S  I  I  F  S  G  G  S  T  Y  Y  A  D  S
                    Query_13364  91   CCACATGAACTGGGTCCACCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAATTATTTTTAGTGGTGGAAGTACATACTACGCAGACTC  180
V  94.4% (272/288)  IGHV3-53*01  96   .T......G........G..................................G......A...C.....T..C.................  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  S  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  M
                    Query_13364  181  CGTGAAGGGCCGATTCTCCATCTCCAGAGACAATTCCAAAAACACACTATATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCAT  270
V  94.4% (272/288)  IGHV3-53*01  186  ................A......................G.....G..G.......................................G.  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      --------->                                                                
                                        Y  Y  C  A  R  D  W  A  V  G  L  L  G  L  G  Q  G  T  L  V  T  V  S  S  
                    Query_13364  271  GTATTACTGTGCGAGAGATTGGGCCGTTGGCCTACTGGGTCTGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  344
V  94.4% (272/288)  IGHV3-53*01  276  ..................--------------------------------------------------------  293
                                        Y  Y  C  A  R                                                           
D  100.0% (6/6)     IGHD2-8*02   10   --------------------------------......------------------------------------  15
J  100.0% (32/32)   IGHJ4*02     17   ------------------------------------------................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_639

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD5-18*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GCTATGG	GCCGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCTATGGGCCGCTTGACCAC	ARGYGPLDH	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_13365  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_13365  91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  L  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  Y  G  P  L  D  H  W  G 
                    Query_13365  181  CAGCTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCTATGGGCCGCTTGACCACTGGGGC  270
V  91.4% (223/244)  IGHV4-59*01  229  ...T...............G................................A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-18*01  10   ----------------------------------------------------------------.......-------------------  16
J  97.6% (41/42)    IGHJ4*02     7    ----------------------------------------------------------------------------.....T........  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_13365  271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  97.6% (41/42)    IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_16644

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            322     2e-90
IGHD1-26*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AACTTCCCGTCATC	AGTGGGAGC	CGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTCCCGTCATCAGTGGGAGCCGCGACTAC	AKLPVISGSRDY	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_13366  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  92.2% (225/244)  IGHV4-4*02   49   ........................................G..GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  A  E  I  H  H  G  G  P  T  N  Y  N  P  A  L  E  S  R  V  T  I  S  V  D  K  S  N 
                    Query_13366  91   GAGTGGATAGCGGAAATCCATCATGGTGGACCCACCAACTACAACCCGGCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAC  180
V  92.2% (225/244)  IGHV4-4*02   139  ........T.G.......T.....A....GAG................T.....A..................................G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  S  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  K  L  P  V  I  S  G  S  R 
                    Query_13366  181  AACCAATTCTCCCTGAGCCTGAGCTCTCTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAAACTTCCCGTCATCAGTGGGAGCCGC  270
V  92.2% (225/244)  IGHV4-4*02   229  .....G..........AG.........G....................................--------------------------  292
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (9/9)     IGHD1-26*01  6    ------------------------------------------------------------------------------.........---  14

                                      ----->                                  
                                       D  Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_13366  271  GACTACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  310
J  97.5% (39/40)    IGHJ4*02     9    .................................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_87814

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           311     4e-87
IGHD5-12*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTGTG	TAAAACGAGCA	GGATATAGTGACTAC	AACGCGCAG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAAACGAGCAGGATATAGTGACTACAACGCGCAGGACTAC	VKRAGYSDYNAQDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  A  L  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_13367  1    GGTCCCTGAGACTCTCCTGCGCAGCCTCTGGATTCACCTTTAGAAGTTATGCTTTGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGG  90
V  90.9% (221/243)  IGHV3-30*04  47   ...................T....................C..T..C......A.................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  G  A  V  I  S  Y  D  G  V  T  K  Y  Y  S  D  S  V  T  G  R  F  T  I  S  R  D  N  S  
                    Query_13367  91   CGTGGGGGGCAGTTATATCATATGATGGAGTTACTAAATACTATTCAGACTCCGTGACGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  90.9% (221/243)  IGHV3-30*04  137  A.....T......................AG..A.........CG............A................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  F  L  E  M  N  S  L  R  S  E  D  T  G  V  Y  Y  C  V  K  R  A  G  Y  S  D  Y  
                    Query_13367  181  AGAACACGCTGTTTCTGGAAATGAACAGCCTGAGAAGTGAAGACACGGGTGTCTATTATTGTGTAAAACGAGCAGGATATAGTGACTACA  270
V  90.9% (221/243)  IGHV3-30*04  227  ............A....C.................GC...G.......C...G.....C....---------------------------  289
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  93.3% (14/15)    IGHD5-12*01  3    --------------------------------------------------------------------------..........G....-  17

                                      ------------->                                  
                                      N  A  Q  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_13367  271  ACGCGCAGGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  318
J  97.5% (39/40)    IGHJ4*02     9    --------....................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_87815

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*12                                                                                           291     6e-81
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*12	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCCACCGGTGG	AGCAATGGCTGG	GGAACA	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCACCGGTGGAGCAATGGCTGGGGAACATACTATAACTACGGTATGGACGCC	ARGHRWSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	21	3	6	70
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	219	23	6	88.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  T  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_13368  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGCCCTTCACTGACAGTGGTTATTATTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.3% (219/248)  IGHV4-34*12  49   .......................C..T......T......------.......C..C....G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  T  I  H  L  G  N  T  N  Y  N  P  S  L  Q  S  R  V  I  I  S  I  D  T  S 
                    Query_13368  91   CTGGAATGGATTGGGGAAACCATTCATCTTGGAAACACCAACTACAACCCGTCCCTCCAGAGTCGAGTCATCATATCAATAGACACGTCC  180
V  88.3% (219/248)  IGHV4-34*12  133  .....G.............T.......AG.....G......................A............C.......G...........  222
                                       L  E  W  I  G  E  I  I  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  K  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  W  S  N  G 
                    Query_13368  181  AAGAAGCAGTTCTCCCTGAAATTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTATTGTGCGAGGGGCCACCGGTGGAGCAATGGC  270
V  88.3% (219/248)  IGHV4-34*12  223  .....C..............GC...............................G.....C........----------------------  290
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_13368  271  TGGGGAACATACTATAACTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.2% (52/57)    IGHJ6*02     6    ---------.....CT...............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_87817

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         386     1e-109
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATCCCTTAAGGTCAATCGCGTC	CAGTGGCTGG	GCGTCA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCA	ARHPLRSIASSGWAS	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	268	21	0	92.7


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  R  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_13369    1    GCAGCTGGTGCAGTCTGGAGGAGAGGTGAAGAAGCCCGGGGAGTCTTTGAGGATTTCCTGTAAGGCTTCTGGATACACCTTTACCAACTA  90
V  92.7% (268/289)  IGHV5-10-1*01  6    ....................C.........A...............C.......C..........G...........G........G...  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  V  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  R  Y  S  P
                    Query_13369    91   CTGGATCAGCTGGGTGCGCCAGGTGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGACCCTAGTGACTCTTATACCCGCTACAGTCC  180
V  92.7% (268/289)  IGHV5-10-1*01  96   ......................A.....................................T..................AA......C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  D  G  N  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  M  A  S  D  T  A
                    Query_13369    181  GTCCTTCGACGGCAACGTCACCATCTCAGTTGACAAGTCCATCAGTACTGCCTATTTGCAGTGGAGCAGCCTGATGGCCTCGGACACCGC  270
V  92.7% (268/289)  IGHV5-10-1*01  186  .......C.A...C...............C...............C........CC..................A...............  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------CDR3-IMGT----------------->                                
                                          M  Y  Y  C  A  R  H  P  L  R  S  I  A  S  S  G  W  A  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13369    271  CATGTATTATTGTGCGAGACATCCCTTAAGGTCAATCGCGTCCAGTGGCTGGGCGTCATGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  92.7% (268/289)  IGHV5-10-1*01  276  .........C.........-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  100.0% (10/10)   IGHD6-19*01    9    ------------------------------------------..........--------------------------------------  18
J  100.0% (34/34)   IGHJ4*02       15   ----------------------------------------------------------................................  46

                                          
                                          
                    Query_13369    361  AG  362
J  100.0% (34/34)   IGHJ4*02       47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_188699

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         361     4e-102
IGHD3-3*01                                                                                            14.1    8.0   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	26	1	0	96.3
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	238	7	0	97.1


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  A  V  S  G  Y  S  V  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_13370    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTACTCCGTCAGCAGTGGTTACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  97.1% (238/245)  IGHV4-38-2*01  49   ....................................A.....................................................  138
                                         T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_13370    91   GAGTGGATTGGGAGTATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTAAG  180
V  97.1% (238/245)  IGHV4-38-2*01  139  .....................C.T.........................................C....................C...  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  D 
                    Query_13370    181  AACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCGAC  270
V  97.1% (238/245)  IGHV4-38-2*01  229  ................................C.....A..........................-------------------------  293
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-3*01     15   ------------------------------------------------------------------.......-----------------  21
J  100.0% (51/51)   IGHJ5*02       1    ----------------------------------------------------------------------------..............  14

                                        -->                                  
                                         P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13370    271  CCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (51/51)   IGHJ5*02       15   .....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_87811

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           338     5e-95
IGHD1-1*01                                                                                            12.2    33   
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGACGGACCCCTTTAGAGATGGCTTCAATG	GGAACG	TCGGACCG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGACGGACCCCTTTAGAGATGGCTTCAATGGGAACGTCGGACCGTACTTTGACTCC	AGTDPFRDGFNGNVGPYFDS	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	231	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  N  Y  C  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_13371  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTAATTACTGCTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  93.9% (231/246)  IGHV4-31*01  49   ................................................GG.....A......C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  M  S  V  D  T  S 
                    Query_13371  91   CTGGAGTGGATTGGATACATCTATTATAGTGGGAGTACGTACTACAACCCGTCCCTCAAGAGTCTAGTCACCATGTCAGTTGACACGTCT  180
V  93.9% (231/246)  IGHV4-31*01  139  ..............G...........C........C..C.............................T.....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  V  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  T  D  P  F  R  D  G 
                    Query_13371  181  AAGAACCAGTTCTCCCTGAAGGTGACCTCTGTGACGGCCGCGGACACGGCCGTGTATTATTGTGCGGGGACGGACCCCTTTAGAGATGGC  270
V  93.9% (231/246)  IGHV4-31*01  229  .....................C...G.........T.......................C......------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      DR3-IMGT------------------------>                                  
                                       F  N  G  N  V  G  P  Y  F  D  S  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_13371  271  TTCAATGGGAACGTCGGACCGTACTTTGACTCCTGGGGCCAGGGAATTCTGGTCTCCGTCTCCTCAG  337
D  100.0% (6/6)     IGHD1-1*01   10   -------......------------------------------------------------------  15
J  91.3% (42/46)    IGHJ4*02     3    ---------------------..........A..............CC......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_87812

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           324     8e-91
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  I  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13372  1    ACCCTGTCCCTCATCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.2% (226/245)  IGHV4-59*01  49   .............C.................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_13372  91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  92.2% (226/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_13372  181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACGCGGCCGTTTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.2% (226/245)  IGHV4-59*01  229  .............A.........................A.......G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_13372  271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------...........................A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_87813

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           371     8e-105
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GGCAGGAGATGGAC	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCAGGAGATGGACTACGACTACTACTACGGCTTTGACGTC	ARGQEMDYDYYYGFDV	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	19	5	0	79.2
FR3-IMGT	177	290	114	101	13	0	88.6
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	266	29	0	90.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  S  F  N 
                    Query_13373  3    CAGGTGCAGCTGGTGCAGTCTGGAGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTGTCCTGTGCAGCGTCTGGATTCAGCTTCAAT  92
V  90.2% (266/295)  IGHV3-33*01  1    ...............G.......G...................................C......................C.....G.  90
                                       Q  V  Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       M  Y  A  F  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  R  G  K  Y  N 
                    Query_13373  93   ATGTATGCCTTCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTCATTTGGTATGACGGAAGGGGTAAATACAAT  182
V  90.2% (266/295)  IGHV3-33*01  91   .GC....G.A.G...............................................T..A........T.....TAA.......T..  180
                                       S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       V  G  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  E  M  K  S  L  R  V  E  D 
                    Query_13373  183  GTGGGCTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAATTCCAAAAACACACTATATCTGGAAATGAAGAGCCTGAGAGTCGAGGAC  272
V  90.2% (266/295)  IGHV3-33*01  181  .CA.A...............A..........................G.....G..G......C.......C..........C.......  270
                                       A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  G  Q  E  M  D  Y  D  Y  Y  Y  G  F  D  V  W  G  Q  G  T  T  V  T 
                    Query_13373  273  ACGGCTGTATATTATTGTGCGAGAGGGCAGGAGATGGACTACGACTACTACTACGGCTTTGACGTCTGGGGCCAAGGGACCACGGTCACC  362
V  90.2% (266/295)  IGHV3-33*01  271  ........G.....C..........-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
J  93.3% (56/60)    IGHJ6*02     3    ---------------------------------------...T.............TA.G..............................  53

                                               
                                       V  S  S 
                    Query_13373  363  GTCTCCTCA  371
J  93.3% (56/60)    IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_188695

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            293     2e-81
IGHD1-26*01                                                                                           10.3    117  
IGHJ6*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACTTTCGCTTCGC	ACTAC	CTACATT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACTTTCGCTTCGCACTACCTACATTTGGACGTC	ARTFASHYLHLDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	245	218	24	3	89


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T     N  Q  W  W  T  W  V  R  Q  P  P  G  R  G  L 
                    Query_13374  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAC---TAATCAGTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAGGGGGCTG  87
V  89.0% (218/245)  IGHV4-4*01   49   ........................................GCAG..G.A.C.......G.......................A.......  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  F  P  N  G  S  T  N  Y  S  P  S  L  K  S  R  L  T  I  S  M  A  K  S  K 
                    Query_13374  88   GAGTGGATTGGGGAAATTTTTCCTAATGGAAGCACCAACTACAGCCCGTCCCTCAAGAGTCGACTCACCATTTCAATGGCTAAGTCCAAG  177
V  89.0% (218/245)  IGHV4-4*01   139  .................C.A..A..G...G.............A...................G.......A...G.A.AC.........  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  V  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  T  F  A  S  H  Y  L  H 
                    Query_13374  178  AACCAGGTCTCCCTGAAACTTAACTCTGTGACGGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGACTTTCGCTTCGCACTACCTACAT  267
V  89.0% (218/245)  IGHV4-4*01   229  ......T..........G..G.G.........C......................G.........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  100.0% (5/5)     IGHD1-26*01  16   -------------------------------------------------------------------------------.....------  20

                                      -------->                              
                                       L  D  V  W  G  Q  G  A  T  V  S  V  S 
                    Query_13374  268  TTGGACGTCTGGGGCCAAGGGGCCACGGTCAGCGTCTCC  306
J  94.7% (36/38)    IGHJ6*02     22   -....................A.........C.......  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_130964

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            353     1e-99
IGHD4-17*01                                                                                           21.8    0.044
IGHJ6*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD4-17*01	IGHJ6*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGA	ACGGTGACTAC	GTCCCCCAAGACCCGCAGAAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGAACGGTGACTACGTCCCCCAAGACCCGCAGAATTACTACTACTATGGTATGGACGTC	ARDRNGDYVPQDPQNYYYYGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13375  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-7*01   47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  H  I  K  E  D  G  G  D  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13375  91   AGTGGGTGGCCCACATAAAGGAAGATGGAGGAGACAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.2% (238/250)  IGHV3-7*01   137  ...........A........C........A.T..G.......................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  L  L  H  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  A  R  D  R  N  G  D  Y  V  
                    Query_13375  181  AGAATTTGCTGCATCTGCAAATGAACAGCCTGACAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATAGGAACGGTGACTACGTCC  270
V  95.2% (238/250)  IGHV3-7*01   227  ....C.CA...T.....................G..................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (11/11)   IGHD4-17*01  6    ---------------------------------------------------------------------------...........----  16

                                      --CDR3-IMGT----------------------------->                                  
                                      P  Q  D  P  Q  N  Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S  
                    Query_13375  271  CCCAAGACCCGCAGAATTACTACTACTATGGTATGGACGTCTGGGGTCAAGGGACCACGGTCACCGTCTCCTCAG  345
J  96.6% (56/58)    IGHJ6*01     6    -----------------...........C.................G............................  63


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_188696

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*02                                                                                           396     2e-112
IGHD3-10*01                                                                                           31.5    6e-05 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGTTCTC	TGGTTCGGGGAGTTAT	G	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGTTCTCTGGTTCGGGGAGTTATGACTTTGAATAC	ARDRFSGSGSYDFEY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	272	19	0	93.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  E  Q  P  G  A  S  V  T  V  S  C  K  A  S  G  Y  T  F  N  I  Y
                    Query_13376  1    GCAGCTGGTACAGTCTGGGGCTGAGGTGGAGCAGCCTGGGGCCTCAGTGACGGTTTCCTGCAAGGCATCTGGATACACGTTCAACATCTA  90
V  93.5% (272/291)  IGHV1-46*02  6    .........G..................A..A..................A...........................C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  N  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  N  G  G  Y  T  T  Y  A  Q
                    Query_13376  91   CTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAATAATCAACCCTAATGGTGGTTACACAACCTACGCACA  180
V  93.5% (272/291)  IGHV1-46*02  96   ....................................G............................G.......AG.....G.........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  L  E  L  S  S  L  R  S  E  D  T  A
                    Query_13376  181  GAAGTTTCAGGGCAGAGTCACCATGACTAGGGACACGTCCACGAGCACAGTGTATCTGGAATTGAGCAGCCTGAGATCTGAGGATACGGC  270
V  93.5% (272/291)  IGHV1-46*02  186  ......C....................C.......................C..CA....GC......................C.....  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  D  R  F  S  G  S  G  S  Y  D  F  E  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13376  271  CGTGTATTACTGTGCGAGAGATCGGTTCTCTGGTTCGGGGAGTTATGACTTTGAATACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  93.5% (272/291)  IGHV1-46*02  276  .....................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (16/16)   IGHD3-10*01  10   ------------------------------................--------------------------------------------  25
J  97.8% (44/45)    IGHJ4*02     4    -----------------------------------------------.......C...................................  46

                                        
                                        
                    Query_13376  361  AG  362
J  97.8% (44/45)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_188691

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           347     7e-98
IGHD1-1*01                                                                                            12.2    32   
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGAGCAC	CAACTG	CCCGGGTCGG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGAGCACCAACTGCCCGGGTCGGCGGTATGGACGTC	ARDRAPTARVGGMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  D  M  N  W  V  R  Q  A  P  G  K  G  P  
                    Query_13377  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTAACTATGACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  94.4% (236/250)  IGHV3-21*01  47   ....................................C........G....AG...................................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  R  S  S  S  H  I  Y  N  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13377  91   AGTGGGTCTCATACATTAGTAGAAGTAGTAGTCACATATATAACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-21*01  137  ............C.........T.........T.......CT................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  F  L  Q  M  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  R  A  P  T  A  R  
                    Query_13377  181  AGAATTCACTGTTTCTCCAAATGAACAACCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATCGAGCACCAACTGCCCGGG  270
V  94.4% (236/250)  IGHV3-21*01  227  ....C.......A...G..........G..........................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-1*01   5    ------------------------------------------------------------------------------......------  10

                                      ---------------->                                 
                                      V  G  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13377  271  TCGGCGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  100.0% (46/46)   IGHJ6*02     17   ----..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_188690

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           420     7e-120
IGHD1-26*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGACGTCTTTCC	TATAGTG	AAAACTATA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGACGTCTTTCCTATAGTGAAAACTATAACTTTGACTAC	ASRRLSYSENYNFDY	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	73	2	0	97.3
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	293	5	5	0	0	100
Total	N/A	N/A	293	281	12	0	95.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 
                    Query_13378  1    CAGGTGCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGC  90
V  95.9% (281/293)  IGHV1-69*01  1    ..............G........G..................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  V  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  T  F  D  T  A  N  Y 
                    Query_13378  91   GACTATGTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTACCTTTGATACAGCAAACTAC  180
V  95.9% (281/293)  IGHV1-69*01  91   AG.....C..............................................................T.....G.............  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  V  D 
                    Query_13378  181  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGTCCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGTAGAC  270
V  95.9% (281/293)  IGHV1-69*01  181  ................................................AG...................................AG...  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------CDR3-IMGT----------------->                           
                                       T  A  V  Y  Y  C  A  S  R  R  L  S  Y  S  E  N  Y  N  F  D  Y  W  G  Q  G  T  L  V  T  V 
                    Query_13378  271  ACGGCCGTATATTACTGTGCGAGCCGACGTCTTTCCTATAGTGAAAACTATAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTC  360
V  95.9% (281/293)  IGHV1-69*01  271  ........G..............-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (7/7)     IGHD1-26*01  3    ------------------------------------.......-----------------------------------------------  9
J  100.0% (45/45)   IGHJ4*02     4    ----------------------------------------------------......................................  41

                                             
                                       S  S  
                    Query_13378  361  TCCTCAG  367
J  100.0% (45/45)   IGHJ4*02     42   .......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_188693

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           341     5e-96
IGHD3-10*02                                                                                           12.2    32   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TTCAATTTCTGGATTGGATTT	TATGTT	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTTCAATTTCTGGATTGGATTTTATGTTCTTTGACTAC	ASSISGLDFMFFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  I  V  S  G  G  S  I  S  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_13379  1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGGCTCCATTAGTAGTAGTGGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.0% (233/248)  IGHV4-39*01  49   ...................C..................C..C......A.........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  T  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_13379  91   CTGGAGTGGATTGGAAATATCTATTATAGTGGGAGTACCTACTACAACACGTCCCTCAAGAGTCGACTCACCATATCCGTGGACACGTCC  180
V  94.0% (233/248)  IGHV4-39*01  139  ..............G.G..................C............C.................G.............A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  T  S  L  T  A  A  D  T  A  V  Y  Y  C  A  S  S  I  S  G  L  D  F 
                    Query_13379  181  AAGAACCAGTTCTCCCTGAAGTTGACCTCTTTGACCGCCGCAGACACGGCTGTATATTATTGTGCGAGTTCAATTTCTGGATTGGATTTT  270
V  94.0% (233/248)  IGHV4-39*01  229  .....................C...G....G......................G.....C........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (6/6)     IGHD3-10*02  8    -----------------------------------------------------------------------------------------.  8

                                      -------------->                               
                                       M  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_13379  271  ATGTTCTTTGACTACTGGGGCCAGGGAACACTGGTCACCGTCTCCT  316
D  100.0% (6/6)     IGHD3-10*02  9    .....-----------------------------------------  13
J  97.6% (40/41)    IGHJ4*02     5    -----........................C................  45


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_188692

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           442     2e-126
IGHD3-3*01                                                                                            41.1    8e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACGCCT	CGATTTTTGGAGTGGTTATTGTAC	GAGAATCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTAC	ARYASIFGVVIVRESFDY	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	286	3	0	99


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_13380  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTA  90
V  99.0% (286/289)  IGHV5-51*01  6    ..........................................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_13380  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCCGGTGACTCTGATACTAGATACAGCCC  180
V  99.0% (286/289)  IGHV5-51*01  96   ............................................................T..T..............C...........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13380  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  99.0% (286/289)  IGHV5-51*01  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        M  Y  Y  C  A  R  Y  A  S  I  F  G  V  V  I  V  R  E  S  F  D  Y  W  G  Q  G  T  L  V  T
                    Query_13380  271  CATGTATTACTGTGCGAGATACGCCTCGATTTTTGGAGTGGTTATTGTACGAGAATCTTTTGACTACTGGGGCCAGGGAACCCTGGTCAC  360
V  99.0% (286/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  95.8% (23/24)    IGHD3-3*01   7    --------------------------....................A...----------------------------------------  30
J  100.0% (43/43)   IGHJ4*02     6    ----------------------------------------------------------................................  37

                                                 
                                        V  S  S  
                    Query_13380  361  CGTCTCCTCAG  371
J  100.0% (43/43)   IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_265843

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*09                                                                                           344     6e-97
IGHD2-21*02                                                                                           29.5    2e-04
IGHJ4*02                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*09	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	232	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  Y  S  A  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13381  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTACAGTGCTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  95.1% (232/244)  IGHV4-34*09  49   .....................................T.....G.......................................A......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  K  N 
                    Query_13381  91   TGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCTAAGAAC  180
V  95.1% (232/244)  IGHV4-34*09  139  .........G.A...AA.C.T.....A......A..........................G.............................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A  N  Y 
                    Query_13381  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCAAACTAC  270
V  95.1% (232/244)  IGHV4-34*09  229  ................................................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------..........G.......-------  22
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13381  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_106637

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           304     9e-85
IGHD3-3*01                                                                                            37.2    9e-07
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTACTCGGC	TACGATTTTTGGAGTGGTT	CTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTACTCGGCTACGATTTTTGGAGTGGTTCTCGACTAC	ARGYSATIFGVVLDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	218	24	0	90.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  F  S  G  D  S  T  S  G  H  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13382  1    ACCCTGTCCCTCACCTGCACTTTCTCTGGAGACTCCACCAGTGGTCACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.1% (218/242)  IGHV4-59*01  49   .....................G.......T.G.....T....A..T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  T  G  S  T  T  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  A  S  R  N 
                    Query_13382  91   TGGATTGGCTATGTCTATTATACTGGGAGCACCACGTACAACCCCTCCCTCGAGAGTCGAGTCACCATGTCAGTGGACGCGTCCAGGAAC  180
V  90.1% (218/242)  IGHV4-59*01  139  ........G...A.......C.G...........AC...............A................A.....A...A......A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  Y  S  A  T  I  F  G  V 
                    Query_13382  181  CAGTTCTCCCTGAAGTTAAAGTCTGTGACCGCTGCGGACACGGCCGTTTATTATTGTGCGAGGGGCTACTCGGCTACGATTTTTGGAGTG  270
V  90.1% (218/242)  IGHV4-59*01  229  ...............C.G.GC..........................G.....C........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (19/19)   IGHD3-3*01   5    --------------------------------------------------------------------------................  20

                                      ----------->                                  
                                       V  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13382  271  GTTCTCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  100.0% (19/19)   IGHD3-3*01   21   ...-------------------------------------------  23
J  100.0% (40/40)   IGHJ4*02     9    ------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_265845

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     5e-89
IGHD3-10*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCC	TTCGGGG	GGTGACAGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTCGGGGGGTGACAGGTTTGACTAC	ARDPSGGDRFDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  N  V  S  G  G  S  I  S  T  F  H  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_13383  1    ACCCTGTCCCTTACCTGCAATGTCTCTGGTGGCTCCATCAGTACTTTCCACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...........C.......C.......................G..A.T..............................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  V  S  F  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_13383  91   TGGATTGGGTCTGTCTCTTTTAGCGGGAGCACCAACTACAATCCCTCCCTCAAGAGTCGAGTTTCCATATCAGTAGACACGTCCAAGAAC  180
V  91.4% (224/245)  IGHV4-59*01  139  ..........A.A...A..AC..T.................C....................CA..........................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  D  P  S  G  G  D  R  F  D 
                    Query_13383  181  CAGTTCTCCCTGAAACTGAACTCCGTGACGGCTGCGGACACGGCCGTTTATTTCTGTGCGAGAGATCCTTCGGGGGGTGACAGGTTTGAC  270
V  91.4% (224/245)  IGHV4-59*01  229  ..............G....G...T.....C.................G....A............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-10*01  13   --------------------------------------------------------------------.......---------------  19
J  97.7% (42/43)    IGHJ4*02     6    ------------------------------------------------------------------------------------......  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13383  271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  307
J  97.7% (42/43)    IGHJ4*02     12   ................................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_118306

Length=374
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           319     2e-89
IGHD3-10*01                                                                                           16.1    2.4  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTAGA	TCGTCGGCTTTCCTCCCCCCGAGCGC	GTTCGGGG	GGGTCTATTATTT	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCTAGATCGTCGGCTTTCCTCCCCCCGAGCGCGTTCGGGGGGGTCTATTATTTCTACGGTCTGGACGTC	SRSSAFLPPSAFGGVYYFYGLDV	249	317	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	102	12	0	89.5
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	229	25	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  S  G  S  D  M  N  W  V  R  Q  A  S  G  K  G  L  
                    Query_13384  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGGTTCAGTGGCTCTGATATGAACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  90.2% (229/254)  IGHV3-73*01  47   .........A.....................G....CC.............C....C.................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  H  I  R  S  K  A  N  N  Y  A  T  A  Y  A  E  S  M  K  G  R  F  I  I  S  R  D  
                    Query_13384  91   AGTGGGTTGGCCATATCAGAAGCAAAGCCAACAATTATGCGACTGCCTACGCTGAGTCCATGAAAGGCAGGTTCATCATCTCCAGAGATG  180
V  90.2% (229/254)  IGHV3-73*01  137  ............G...T...........T....G...C.....A..A..T....C...GG...............C..............  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  E  N  T  A  Y  L  Q  M  D  S  L  Q  T  E  D  T  A  V  Y  Y  C  S  R  S  S  A  F  L  
                    Query_13384  181  ACTCAGAGAACACGGCGTATCTGCAAATGGACAGCCTACAAACCGAGGACACGGCCGTCTATTACTGTTCTAGATCGTCGGCTTTCCTCC  270
V  90.2% (229/254)  IGHV3-73*01  227  .T...A.......................A.......GA...................G.........A.....----------------  300
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 

                                      --------CDR3-IMGT----------------------------->                                
                                      P  P  S  A  F  G  G  V  Y  Y  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_13384  271  CCCCGAGCGCGTTCGGGGGGGTCTATTATTTCTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  349
D  100.0% (8/8)     IGHD3-10*01  12   ----------........-------------------------------------------------------------  19
J  97.9% (47/48)    IGHJ6*02     14   -------------------------------.......A........................................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36640077


Query= Query_227459

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           260     1e-71
IGHD2-21*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCAATTC	TTGTGTTGGTGAT	GCCTGCGCTC	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATCCCAATTCTTGTGTTGGTGATGCCTGCGCTCACTATTACTTCTCCGGCATGGACGTC	TRDPNSCVGDACAHYYFSGMDV	241	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	19	21	3	3	0	0	100
CDR1-IMGT	22	45	24	17	7	0	70.8
FR2-IMGT	46	96	51	48	3	0	94.1
CDR2-IMGT	97	126	30	22	8	0	73.3
FR3-IMGT	127	240	114	100	14	0	87.7
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	230	198	32	0	86.1


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><----------C
                                       S  G  F  N  F  R  F  V  A  I  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  F  I  R  T  T 
                    Query_13385  19   TCTGGATTCAACTTTCGTTTCGTTGCTATCAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGTTTCATTAGAACCACA  108
V  86.1% (198/230)  IGHV3-49*04  73   ..........C....G..GATTA......G.G.......................................A.............G..A.  162
                                       S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  F  I  R  S  K 

                                      DR2-IMGT---------><----------------------------------------------------FR3-IMGT-----------
                                       P  F  G  G  T  A  E  Y  A  A  S  V  K  D  R  F  T  M  S  R  D  D  S  R  S  I  A  Y  L  V 
                    Query_13385  109  CCCTTCGGTGGGACAGCTGAATACGCCGCGTCTGTGAAAGACAGATTCACCATGTCGAGAGATGATTCCAGGAGCATCGCCTATCTAGTG  198
V  86.1% (198/230)  IGHV3-49*04  163  G.T.AT.........A.A......................G............C..A.............AA..............GCAA  252
                                       A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  D  S  K  S  I  A  Y  L  Q 

                                      -----------------------------------------><----------------------------CDR3-IMGT----------
                                       M  S  S  L  K  T  E  D  T  G  V  Y  Y  C  T  R  D  P  N  S  C  V  G  D  A  C  A  H  Y  Y 
                    Query_13385  199  ATGAGCAGCCTGAAAACCGAAGACACAGGCGTCTATTATTGTACTAGAGATCCCAATTCTTGTGTTGGTGATGCCTGCGCTCACTATTAC  288
V  86.1% (198/230)  IGHV3-49*04  253  ....A...............G.......C...G.....C...........----------------------------------------  302
                                       M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                                           
D  92.3% (12/13)    IGHD2-21*01  7    -----------------------------------------------------------.....G.......------------------  19
J  93.2% (55/59)    IGHJ6*02     4    ----------------------------------------------------------------------------------....C...  11

                                      ----------------->                                 
                                       F  S  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13385  289  TTCTCCGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  339
J  93.2% (55/59)    IGHJ6*02     12   .A..A...T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_217839

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           403     1e-114
IGHD7-27*01                                                                                           12.2    36    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGGCCAACCGCCTGGGCGTTAAC	ACTGGG	AC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGCCAACCGCCTGGGCGTTAACACTGGGACCTACTTTGACTCC	ARRANRLGVNTGTYFDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	274	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  G  S  G  D  T  F  P  G  Y
                    Query_13386  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGAGACACCTTTCCCGGCTA  90
V  94.5% (274/290)  IGHV5-51*01  6    .............................A...........................................T...G....A..A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  F  I  F  P  G  D  S  D  T  K  Y  S  P
                    Query_13386  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAGGGGCCTGGAGTGGATGGGGTTCATCTTTCCTGGTGACTCTGATACCAAATACAGCCC  180
V  94.5% (274/290)  IGHV5-51*01  96   ................................AA..................A......A....................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  Q  G  Q  V  T  F  S  A  D  K  S  I  G  T  A  Y  L  Q  W  S  R  L  K  A  S  D  T  A
                    Query_13386  181  GGCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCGGCACCGCCTACCTGCAGTGGAGTAGGTTGAAGGCCTCGGACACCGC  270
V  94.5% (274/290)  IGHV5-51*01  186  .T....................A....................A......................C..CC...................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  R  A  N  R  L  G  V  N  T  G  T  Y  F  D  S  W  G  Q  G  T  L  V  S  V
                    Query_13386  271  CATGTATTACTGTGCGAGACGGGCCAACCGCCTGGGCGTTAACACTGGGACCTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCTCCGT  360
V  94.5% (274/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD7-27*01  4    -------------------------------------------......-----------------------------------------  9
J  95.7% (45/47)    IGHJ4*02     2    ---------------------------------------------------...........A......................A....  40

                                              
                                        S  S  
                    Query_13386  361  CTCCTCAG  368
J  95.7% (45/47)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_242612

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            353     1e-99
IGHD2-15*01                                                                                           14.1    8.7  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATATGC	GGATATT	CTGTCCTTAGGTTTTAGGCGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATATGCGGATATTCTGTCCTTAGGTTTTAGGCGTTACTACTTTGACTAC	AKYADILSLGFRRYYFDY	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	236	10	0	95.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13387  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.9% (236/246)  IGHV3-7*01   47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  Y  E  K  Y  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_13387  91   AGTGGGTGGCCAACATAAAGGAAGATGGATATGAGAAATACTATGTGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.9% (236/246)  IGHV3-7*01   137  ....................C........AG..........................A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  P  L  Y  L  Q  I  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  K  Y  A  D  I  L  S  L  
                    Query_13387  181  AGAACCCACTGTATCTGCAAATCAACAGCCTGAGGGTCGAGGACACGGCTGTGTATTATTGTGCGAAATATGCGGATATTCTGTCCTTAG  270
V  95.9% (236/246)  IGHV3-7*01   227  .....T................G...........A.C.....................C.......------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD2-15*01  2    -------------------------------------------------------------------------.......----------  8

                                      IMGT--------------------->                                  
                                      G  F  R  R  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13387  271  GTTTTAGGCGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
J  100.0% (48/48)   IGHJ4*02     1    ------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_227451

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         378     3e-107
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GCCTTCGGG	ACTATGTTTCGGGGAATTA	CT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGCCTTCGGGACTATGTTTCGGGGAATTACTACAACTGGTTCGACCCC	ARGLRDYVSGNYYNWFDP	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_13388    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-30-4*01  49   ..................A..............................A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13388    91   CTGGAGTGGATTGGGTACATCTATTACAGTGGAAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  98.4% (246/250)  IGHV4-30-4*01  139  ................................G.........................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R  G  L  R  D  Y  V  S 
                    Query_13388    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTGCTGTGCCAGAGGCCTTCGGGACTATGTTTCG  270
V  98.4% (246/250)  IGHV4-30-4*01  229  ..........................................................A...........--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.5% (17/19)    IGHD3-10*01    6    -------------------------------------------------------------------------------......G....  16

                                        -IMGT--------------------->                                  
                                         G  N  Y  Y  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13388    271  GGGAATTACTACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  89.5% (17/19)    IGHD3-10*01    17   ....G...-----------------------------------------------------  24
J  100.0% (51/51)   IGHJ5*02       1    ----------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_227450

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           425     3e-121
IGHD3-10*01                                                                                           21.8    0.046 
IGHJ5*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCTC	TTCGCGGACTTATTATA	TGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCTCTTCGCGGACTTATTATATGGACTGGTTCGACCCC	ARASSRTYYMDWFDP	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	280	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  A  S  G  Y  S  F  P  N  Y
                    Query_13389  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAGGGCTTCTGGATACAGCTTTCCCAACTA  90
V  97.2% (280/288)  IGHV5-51*01  6    ..............................................................A..G................A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  A  D  S  D  T  K  Y  S  P
                    Query_13389  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGCTGACTCTGATACCAAATACAGCCC  180
V  97.2% (280/288)  IGHV5-51*01  96   .................................................................G..............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  L  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13389  181  GTCCTTCCAAGGCCTGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.2% (280/288)  IGHV5-51*01  186  ..............A.............................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  A  S  S  R  T  Y  Y  M  D  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13389  271  CATGTATTACTGTGCGAGGGCCTCTTCGCGGACTTATTATATGGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  97.2% (280/288)  IGHV5-51*01  276  ..................------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  88.2% (15/17)    IGHD3-10*01  13   ------------------------....G...G........-------------------------------------------------  29
J  100.0% (48/48)   IGHJ5*02     4    --------------------------------------------..............................................  49

                                        
                                        
                    Query_13389  361  AG  362
J  100.0% (48/48)   IGHJ5*02     50   ..  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_227453

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           285     4e-79
IGHD5-12*01                                                                                           18.0    0.58 
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD5-12*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTGGGGAA	TGGCTACGA	GGGCA	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGATGTGGGGAATGGCTACGAGGGCAACGGTATGGACGTC	TRDVGNGYEGNGMDV	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	216	34	0	86.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  G  F  T  F  S  S  H  G  L  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13390  1    GGTCCCTGAGACTCTCCTGTGCAGGCTCAGGATTTACTTTCAGTAGTCATGGCCTGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  86.4% (216/250)  IGHV3-21*01  47   ........................C...T.....C..C........CT..A..A....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  *  V  S  S  I  T  P  R  S  D  Y  K  F  Y  T  P  S  V  R  G  R  F  T  I  S  R  D  N  P  
                    Query_13390  91   AGTGAGTCTCGTCCATTACTCCTCGAAGCGATTACAAATTCTACACACCCTCAGTGAGGGGCCGGTTCACCATCTCCAGAGACAACCCCA  180
V  86.4% (216/250)  IGHV3-21*01  137  ....G.....A.......G.AG.A.T..TAG.....T..A....G..GA........A......A.....................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  E  M  H  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  D  V  G  N  G  Y  E  
                    Query_13390  181  AGAACTCCTTGTATTTGGAAATGCACAGTCTGAGAGCCGAGGACACGGCTGTCTATTACTGTACGAGAGATGTGGGGAATGGCTACGAGG  270
V  86.4% (216/250)  IGHV3-21*01  227  .......AC.....C..C.....A....C.......................G.........G.......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD5-12*01  11   -------------------------------------------------------------------------------.........--  19

                                      ---------------->                                 
                                      G  N  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13390  271  GCAACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  320
J  100.0% (47/47)   IGHJ6*02     16   ---...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_227452

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           327     9e-92
IGHD3-22*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	TTCCCCTTCGATTC	TATTACTATGATGGCAGTTTTTATT	TCGTCGGGGGGGC	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGTTCCCCTTCGATTCTATTACTATGATGGCAGTTTTTATTTCGTCGGGGGGGCCTTCGACTAC	AKVPLRFYYYDGSFYFVGGAFDY	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  I  F  S  S  F  A  M  N  W  V  R  Q  A  P  G  Q  G  L  
                    Query_13391  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCATTTTTAGTAGCTTTGCCATGAACTGGGTCCGCCAGGCTCCAGGGCAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-23*01  47   ....................G...............CC.....C....A........G......................A.........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  T  T  Q  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13391  91   AATGGGTCTCAAGTATTAGTGGTAGTGGTGCTACCACACAGTACGCGGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  92.0% (229/249)  IGHV3-23*01  137  .G.........GC.................G..G....T.C.....A...........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  V  P  L  R  F  Y  Y  
                    Query_13391  181  AGAATTCCCTGTATCTGCAAATGGACAGCCTGAGAGCCGAGGACACGGCCATATATTACTGTGCGAAAGTTCCCCTTCGATTCTATTACT  270
V  92.0% (229/249)  IGHV3-23*01  227  ....CA.G...............A..........................G..................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  84.0% (21/25)    IGHD3-22*01  2    -----------------------------------------------------------------------------------.......  8

                                      --CDR3-IMGT----------------------------->                                  
                                      Y  D  G  S  F  Y  F  V  G  G  A  F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_13391  271  ATGATGGCAGTTTTTATTTCGTCGGGGGGGCCTTCGACTACTGGGGCCAGGGAACCCTGGTCAGCGTCTCCTCAG  345
D  84.0% (21/25)    IGHD3-22*01  9    .....A.T...GG.....---------------------------------------------------------  26
J  95.5% (42/44)    IGHJ4*02     5    -------------------------------...T............................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_227455

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD1-26*01                                                                                           12.2    31   
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARAKGIAVIVDAFDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13392  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ..................A.....................G............................C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  V  S  V  D  M  S  N  N 
                    Query_13392  91   TGGATTGGATATATCTATTACAGAGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAGACATGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G..............T....G.....A......C.....CC................CA.A..........C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  K  G  I  A  V  I  V  D 
                    Query_13392  181  CGGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGTGCGAGAGCTAAGGGTATCGCTGTTATAGTAGAT  270
V  90.6% (221/244)  IGHV4-59*01  229  .A...........AG.................T.......CG.....G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------------......----  8
J  91.8% (45/49)    IGHJ3*01     2    ---------------------------------------------------------------------------------------...  4

                                      ----------->                                  
                                       A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_13392  271  GCTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  316
J  91.8% (45/49)    IGHJ3*01     5    .........G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_227454

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           361     5e-102
IGHD1-26*01                                                                                           18.0    0.69  
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGATA	TATAGGGGGAGC	ACCGGGGC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATATATAGGGGGAGCACCGGGGCCTATTACTTCTACGGTAAGGATGTC	ARIYRGSTGAYYFYGKDV	291	344	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	72	3	0	96
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	48	3	0	94.1
CDR2-IMGT	153	176	24	19	5	0	79.2
FR3-IMGT	177	290	114	100	14	0	87.7
CDR3-IMGT (germline)	291	293	3	3	0	0	100
Total	N/A	N/A	291	261	30	0	89.7


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  L  S 
                    Query_13393  3    CAGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCCTCAGT  92
V  89.7% (261/291)  IGHV1-69*06  1    ...G...................G..T.........................................................T....C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  H  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  I  P  N  V  G  A  A  N  Y 
                    Query_13393  93   AGGCATGGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGTATCATCCCAAATGTTGGTGCAGCAAACTAC  182
V  89.7% (261/291)  IGHV1-69*06  91   ..CT...C......C..........................................G.G........T.TCT.....A...........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  D  R  V  T  I  T  A  D  T  S  S  S  T  V  Y  M  G  V  S  S  R  R  S  E  E 
                    Query_13393  183  GCCCAGAAATTCCAGGACAGAGTCACGATTACCGCGGACACATCTTCGAGCACAGTCTACATGGGGGTGAGCAGCCGGAGATCTGAGGAA  272
V  89.7% (261/291)  IGHV1-69*06  181  ..A.....G.......G.......................A...CA.........C........A.C.........T............C  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------------------CDR3-IMGT--------------------->                  
                                       T  A  T  Y  Y  C  A  R  I  Y  R  G  S  T  G  A  Y  Y  F  Y  G  K  D  V  W  G  Q  G  T  T 
                    Query_13393  273  ACGGCCACTTATTACTGTGCGCGGATATATAGGGGGAGCACCGGGGCCTATTACTTCTACGGTAAGGATGTCTGGGGCCAAGGGACCACG  362
V  89.7% (261/291)  IGHV1-69*06  271  ......GTG............---------------------------------------------------------------------  291
                                       T  A  V  Y  Y  C  A                                                                      
D  91.7% (11/12)    IGHD1-26*01  3    ---------------------------.....T......---------------------------------------------------  14
J  92.7% (51/55)    IGHJ6*02     5    -----------------------------------------------...C....A........T...C.....................  47

                                                  
                                       V  T  V  S 
                    Query_13393  363  GTCACCGTCTCC  374
J  92.7% (51/55)    IGHJ6*02     48   ............  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_227457

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           346     2e-97
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TAAGATACCG	AGTAGTGG	CGTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAAGATACCGAGTAGTGGCGTCGACTAC	ASKIPSSGVDY	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	49	2	0	96.1
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	234	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  V  G  Y  Y  W  T  W  I  R  Q  H  P  G  K  G  
                    Query_13394  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGTTGGTTACTACTGGACCTGGATCCGCCAGCACCCAGGCAAGGGCC  93
V  94.7% (234/247)  IGHV4-31*03  50   .....TCC...A.................................G..............G.....................G.......  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  K  S  
                    Query_13394  94   TGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCACTAGACAAGTCTA  183
V  94.7% (234/247)  IGHV4-31*03  140  .............................................................................G......C.....  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  R  F  S  L  K  L  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  S  K  I  P  S  S  G  V  
                    Query_13394  184  AGAACCGGTTCTCCCTGAAGCTGAGCTCTATGACTGCTGCGGACACGGCCGTGTACTACTGTGCGAGTAAGATACCGAGTAGTGGCGTCG  273
V  94.7% (234/247)  IGHV4-31*03  230  ......A......................G.......C.................T...........-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD3-22*01  14   -----------------------------------------------------------------------------........-----  21
J  100.0% (40/40)   IGHJ4*02     9    -----------------------------------------------------------------------------------------.  9

                                      ---->                                  
                                      D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13394  274  ACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (40/40)   IGHJ4*02     10   .......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_217837

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           355     3e-100
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_13395  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGCC  93
V  96.0% (237/247)  IGHV4-31*03  50   .....TCC...A.....................C......C.............................C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_13395  94   TGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  96.0% (237/247)  IGHV4-31*03  140  ....G.........T.C.........................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  
                    Query_13395  184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCG  273
V  96.0% (237/247)  IGHV4-31*03  230  ...................................................................-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  98.0% (50/51)    IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_13395  274  ACCCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  312
J  98.0% (50/51)    IGHJ5*02     13   ..........................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_82361

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     5e-96
IGHD1-26*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGAATTGG	AGTGGGAGCT	GT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGAGGGAATTGGAGTGGGAGCTGTCTACTACGGTATGGACGTC	TREGIGVGAVYYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  G  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13396  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACTTTCGGTTCCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-21*01  47   .....................C...............C...A..AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  S  I  T  S  S  S  S  Y  M  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13396  91   AGTGGATCTCATCCATTACTAGTAGTAGTTCTTACATGTACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.6% (234/250)  IGHV3-21*01  137  .....G............G..........AG......A....................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  D  S  V  H  L  H  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  T  R  E  G  I  G  V  G  A  
                    Query_13396  181  AGGACTCAGTACATCTGCATATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTACGAGAGAGGGAATTGGAGTGGGAGCTG  270
V  93.6% (234/250)  IGHV3-21*01  227  ..A.....C.GT.......A..........................................G.......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD1-26*01  6    -------------------------------------------------------------------------------..........-  15

                                      T------------------>                              
                                      V  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_13396  271  TCTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  320
J  100.0% (49/49)   IGHJ6*02     11   -.................................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_82360

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           388     5e-110
IGHD6-13*01                                                                                           12.2    36    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	292	327	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	70	4	0	94.6
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	47	4	0	92.2
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	102	12	0	89.5
CDR3-IMGT (germline)	292	294	3	3	0	0	100
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_13397  5    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTCAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCA  94
V  92.8% (269/290)  IGHV5-51*01  2    ....G........G......................................G.................T...................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  W  I  G  W  V  R  Q  V  P  G  K  G  P  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_13397  95   CCTACTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCCGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  184
V  92.8% (269/290)  IGHV5-51*01  92   G.........................A.......G.......T.....G.........................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  I  I  S  A  D  T  S  V  N  T  A  Y  L  Q  W  T  P  L  G  A  S  D  
                    Query_13397  185  GTCCGTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACACGTCCGTCAACACCGCCTACCTGCAGTGGACCCCCCTGGGGGCCTCCGACA  274
V  92.8% (269/290)  IGHV5-51*01  182  .C......................C..............A....A...G....................G.AG....AA......G....  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-------------CDR3-IMGT------------>                                  
                                      T  A  I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13397  275  CCGCCATATATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  361
V  92.8% (269/290)  IGHV5-51*01  272  .......G............-------------------------------------------------------------------  291
                                      T  A  M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    -------------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_82363

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           364     5e-103
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARAIVVLTANYFDY	246	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	113	1	0	99.1
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_13398  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGCC  93
V  96.8% (241/249)  IGHV4-31*03  50   .....TCC...A....................................G.........................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S  
                    Query_13398  94   TGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCTA  183
V  96.8% (241/249)  IGHV4-31*03  140  ..............T......A...........................................G........................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A  
                    Query_13398  184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCAA  273
V  96.8% (241/249)  IGHV4-31*03  230  .....................................................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  94.4% (17/18)    IGHD2-21*02  5    ----------------------------------------------------------------------..........G.......--  22

                                      ------------->                                  
                                      N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13398  274  ACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (48/48)   IGHJ4*02     1    ................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_82362

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         344     7e-97
IGHD1-26*01                                                                                           12.2    34   
IGHJ5*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCCGCGAAAATCGGTCTTTGG	GCTACT	TATCCCTGGGGGGGGCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCCGCGAAAATCGGTCTTTGGGCTACTTATCCCTGGGGGGGGCGACTGGTTCGACCCC	ARGPRKSVFGLLIPGGGDWFDP	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	235	15	0	94


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  D  V  S  G  G  S  I  S  S  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_13399    1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATTAGCAGTAGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  94.0% (235/250)  IGHV4-30-4*01  49   ..................AC..................C......G...A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  S  Y  Y  S  G  S  T  Y  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13399    91   CTGGAGTGGATTGGGTACTCCTATTACAGTGGGAGCACCTACTACAGCCCGTCCCTCAAGAGTCGAGTTACCATATCAGTGGACACGTCC  180
V  94.0% (235/250)  IGHV4-30-4*01  139  ..................AT..........................A.................................A.........  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------------------
                                         N  N  Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  R  K  S  V  F 
                    Query_13399    181  AATAACCAGTTCTCCCTGAGGCTGAGGTCTGTGACTGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGGCCGCGAAAATCGGTCTTT  270
V  94.0% (235/250)  IGHV4-30-4*01  229  ..G................A......C..............A........C..............C....--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                        --CDR3-IMGT--------------------------->                                  
                                         G  L  L  I  P  G  G  G  D  W  F  D  P  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_13399    271  GGGCTACTTATCCCTGGGGGGGGCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  343
D  100.0% (6/6)     IGHD1-26*01    13   --......-----------------------------------------------------------------  18
J  97.9% (47/48)    IGHJ5*02       4    -------------------------................................G...............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_82365

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           297     7e-83
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTGC	ARDLGFNDYGEDALDC	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	217	27	0	88.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q  
                    Query_13400  4    CCCTGAGACTCTCCTGTACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAAT  93
V  88.9% (217/244)  IGHV4-59*01  50   .....TCC...A....C..T..........................C........C............C.................G.G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N  
                    Query_13400  94   GGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAACC  183
V  88.9% (217/244)  IGHV4-59*01  140  ..A....G.....C...T....T....G......C..............C...........C.C.........A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E  
                    Query_13400  184  AGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAGG  273
V  88.9% (217/244)  IGHV4-59*01  230  ..T.........AG..G.G.............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (12/12)   IGHD4-17*01  1    ----------------------------------------------------------------------------............--  12

                                      ------------->                                  
                                      D  A  L  D  C  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_13400  274  ATGCACTCGACTGCTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  321
J  90.0% (36/40)    IGHJ4*02     9    --------....A..............C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_308379

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           294     6e-82
IGHD2-21*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGGGGG	ATTGTGATGGT	ATTAACTGCTTCCCCTGG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGGGGATTGTGATGGTATTAACTGCTTCCCCTGGTACTACTATTATGGAATGCACGTC	AKGDCDGINCFPWYYYYGMHV	240	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	243	4	4	0	0	100
Total	N/A	N/A	240	214	26	0	89.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  L  Y  G  G  S  F  S  G  H  Y  W  I  W  L  R  Q  S  P  G  K  G  L  E  
                    Query_13401  4    CCCTGAGACTCTCCTGTGCTCTCTATGGTGGGTCCTTCAGTGGTCACTACTGGATTTGGCTCCGCCAGTCCCCCGGGAAGGGGCTGGAGT  93
V  89.2% (214/240)  IGHV4-34*01  50   .....TCC...A....C...G.......................T.........GC...A........C....A................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  S  T  K  Y  N  S  S  L  K  S  Q  V  A  M  S  I  D  A  S  K  S  
                    Query_13401  94   GGATTGGGGAAATCAATCATAGTGGAAGCACGAAGTACAACTCGTCCCTCAAGAGTCAAGTCGCCATGTCAATAGACGCGTCCAAGAGTC  183
V  89.2% (214/240)  IGHV4-34*01  140  ...............................C..C......C...............G....A....A...G.....A.........AC.  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------------CDR3-IM
                                      Q  F  Y  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  G  D  C  D  G  I  N  C  F  
                    Query_13401  184  AATTCTACCTGAAGCTGAACTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAAGGGGGATTGTGATGGTATTAACTGCTTCC  273
V  89.2% (214/240)  IGHV4-34*01  230  .G....C...........G...........................G.............------------------------------  289
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  90.9% (10/11)    IGHD2-21*01  6    ------------------------------------------------------------------......G....-------------  16

                                      GT-------------------------->                                 
                                      P  W  Y  Y  Y  Y  G  M  H  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_13401  274  CCTGGTACTACTATTATGGAATGCACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  335
J  91.2% (52/57)    IGHJ6*02     6    -----........C..C..T...G...........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_82367

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           363     1e-102
IGHD5-12*01                                                                                           23.8    0.011 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCTGCTATCGGATACTTT	GTGGCTACGATT	CGGGTGAGGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCTGCTATCGGATACTTTGTGGCTACGATTCGGGTGAGGGCATGGACGTC	ARLCYRILCGYDSGEGMDV	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  R  S  T  N  F  Y  W  G  W  I  R  R  P  P  G  K  G 
                    Query_13402  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGGAGTACTAATTTCTACTGGGGCTGGATCCGCCGGCCCCCAGGGAAGGGG  90
V  96.4% (241/250)  IGHV4-39*01  49   ...............................G.........C....G..G..A....................A................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13402  91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  96.4% (241/250)  IGHV4-39*01  139  ..........................................................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  D  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  H  Y  C  A  R  L  C  Y  R  I  L  C 
                    Query_13402  181  AAGGACCAGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCTGTGCATTACTGTGCGAGACTCTGCTATCGGATACTTTGT  270
V  96.4% (241/250)  IGHV4-39*01  229  ...A.....................G............................T...............--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (12/12)   IGHD5-12*01  10   ----------------------------------------------------------------------------------------..  11

                                      3-IMGT----------------------->                                 
                                       G  Y  D  S  G  E  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13402  271  GGCTACGATTCGGGTGAGGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
D  100.0% (12/12)   IGHD5-12*01  12   ..........-----------------------------------------------------  21
J  100.0% (42/42)   IGHJ6*02     21   ---------------------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_82366

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD3-22*01                                                                                           21.8    0.041
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	ATG	GTATTATTCCGATAACAGTGGTTATT	T	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAATGGTATTATTCCGATAACAGTGGTTATTTCTTTGACTCC	AREWYYSDNSGYFFDS	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13403  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGCCAGTCCCCAGGGAAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ...........................................G.....................G...C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  V  Y  Y  T  G  F  T  D  Y  N  P  S  L  K  S  R  I  T  I  S  L  D  T  S  K  N 
                    Query_13403  91   TGGCTTGGGTTTGTCTATTACACTGGATTCACCGACTACAACCCCTCCCTCAAGAGTCGAATCACCATATCACTAGACACGTCCAAGAAC  180
V  93.1% (228/245)  IGHV4-59*01  139  ...A......A.A.........G...GAG....A..........................G...........G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  R  L  S  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  E  W  Y  Y  S  D  N  S  G 
                    Query_13403  181  CAGTTCTCCCTGAGGCTGAGCTCTGTGGCCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGAATGGTATTATTCCGATAACAGTGGT  270
V  93.1% (228/245)  IGHV4-59*01  229  .............A.............A...................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  80.8% (21/26)    IGHD3-22*01  1    --------------------------------------------------------------------......C.AT....GT......  22

                                      -------------->                                  
                                       Y  F  F  D  S  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_13403  271  TATTTCTTTGACTCCTGGGGCCAGGGAACCCGGGTCACCGTCTCCTCAG  319
D  80.8% (21/26)    IGHD3-22*01  23   ....---------------------------------------------  26
J  95.5% (42/44)    IGHJ4*02     5    -----........A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_308374

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           293     2e-81
IGHD3-10*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TGAGGTTGTTGGTGTCCTC	CGGGGAGTTATT	TCCCCTTACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATGAGGTTGTTGGTGTCCTCCGGGGAGTTATTTCCCCTTACCCCTTTGACTAC	AKDEVVGVLRGVISPYPFDY	231	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	21	3	0	87.5
FR2-IMGT	48	98	51	50	1	0	98
CDR2-IMGT	99	116	24	13	5	6	54.2
FR3-IMGT	117	230	114	109	5	0	95.6
CDR3-IMGT (germline)	231	238	8	7	1	0	87.5
Total	N/A	N/A	233	212	15	6	91


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 
                    Query_13404  12   TGTGCAGCCTCTGGATTCACCTTTAGCGACTACGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGCCTGGAGTGGGTCTCAGCTATT  101
V  91.0% (212/233)  IGHV3-23*01  64   ...........................AG...T...................................G.....................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       G  I  S        N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_13404  102  GGAATTAGT------AACACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAACACTCTGTATCTG  185
V  91.0% (212/233)  IGHV3-23*01  154  A.TGG....GGTGGT.G...............................................................G.........  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-------------------------CDR3-IMGT----------
                                       E  M  E  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D  E  V  V  G  V  L  R  G  V  I  S  P 
                    Query_13404  186  GAAATGGAGAGCCTGAGAGCCGAGGACACGGCCCTATATTACTGTGCGAAGGATGAGGTTGTTGGTGTCCTCCGGGGAGTTATTTCCCCT  275
V  91.0% (212/233)  IGHV3-23*01  244  C.....A.C........................G................A..-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (12/12)   IGHD3-10*01  15   ------------------------------------------------------------------------............------  26

                                      -------------->                                  
                                       Y  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13404  276  TACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (44/44)   IGHJ4*02     5    -----............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_82368

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13405  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13405  91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_13405  181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13405  271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_308370

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	C	TATTGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTATTGTGGTGCTGACTGCAAACTACTTTGGCTAC	ARAIVVLTANYFGY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_13406  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_13406  91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  V  V  L  T  A 
                    Query_13406  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTATTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  94.4% (17/18)    IGHD2-21*02  5    -----------------------------------------------------------------------..........G.......-  22

                                      -------------->                                  
                                       N  Y  F  G  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_13406  271  AACTACTTTGGCTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  319
J  95.8% (46/48)    IGHJ4*02     1    -.........A................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_308371

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           294     6e-82
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAC	TACTATGGTTCGGGGAGT	CGA	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTACTATGGTTCGGGGAGTCGAACTATGACTAC	ARGLLWFGESNYDY	237	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	20	4	0	83.3
FR2-IMGT	48	98	51	48	3	0	94.1
CDR2-IMGT	99	122	24	19	5	0	79.2
FR3-IMGT	123	236	114	104	10	0	91.2
CDR3-IMGT (germline)	237	243	7	7	0	0	100
Total	N/A	N/A	232	210	22	0	90.5


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  R  Y  D  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  Y  I 
                    Query_13407  12   TGTGCAGCCTCTGGATTTACCTTCAGTCGATATGATATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGCATATATT  101
V  90.5% (210/232)  IGHV3-48*03  64   .................C.........A.T.....A.....C.......................................T....C...  153
                                       C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  G  G  G  N  T  I  Y  Y  A  D  S  I  K  G  R  F  T  V  F  R  D  N  A  K  N  S  L  Y  L 
                    Query_13407  102  AGTGGTGGTGGCAACACCATATACTACGCAGACTCTATAAAGGGCCGATTCACCGTATTCAGAGATAACGCCAAGAACTCACTGTATCTG  191
V  90.5% (210/232)  IGHV3-48*03  154  ...A..A....T.GT.....................G.G...............A.C.C......C........................  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------------CDR3-IMGT--------------->   
                                       Q  M  N  S  L  R  V  D  D  T  A  I  Y  Y  C  A  R  G  L  L  W  F  G  E  S  N  Y  D  Y  W 
                    Query_13407  192  CAAATGAACAGCCTGAGAGTCGACGACACGGCTATATATTACTGTGCGAGAGGACTACTATGGTTCGGGGAGTCGAACTATGACTACTGG  281
V  90.5% (210/232)  IGHV3-48*03  244  ...................C...G.........G.T................--------------------------------------  295
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (18/18)   IGHD3-10*01  5    -------------------------------------------------------..................-----------------  22
J  93.0% (40/43)    IGHJ4*02     4    ----------------------------------------------------------------------------...T..........  17

                                                                   
                                       G  Q  G  I  L  V  S  V  S  S
                    Query_13407  282  GGCCAGGGAATCCTGGTCTCCGTCTCCTC  310
J  93.0% (40/43)    IGHJ4*02     18   ..........C.......A..........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_308372

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            300     8e-84
IGHD3-16*01                                                                                           12.2    31   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTTCTTCCCGGGGTCGC	TTGGGG	N/A	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTTCTTCCCGGGGTCGCTTGGGGCTAT	ARDVLPGVAWGY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	221	29	0	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  S  Y  W  M  N  W  V  R  Q  G  P  G  R  G  L  
                    Query_13408  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACTTCCTATTGGATGAACTGGGTCCGCCAGGGTCCAGGGAGGGGGCTGG  90
V  88.4% (221/250)  IGHV3-7*03   47   ..........................................G.AG...........G..............C........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  S  E  H  G  G  E  E  R  Y  V  D  S  V  R  G  R  F  T  I  S  R  D  N  A  
                    Query_13408  91   AGTGGGTGGCCGCCATAAGCGAACATGGAGGTGAAGAGAGGTATGTGGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  88.4% (221/250)  IGHV3-7*03   137  ...........AA.....AGC..G.....A....GA.ATAC...........T....A................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  H  M  N  N  L  R  A  E  D  T  A  T  Y  Y  C  A  R  D  V  L  P  G  V  A  
                    Query_13408  181  AGAATTCATTGTATCTGCACATGAACAACTTGAGAGCCGAGGACACGGCCACATATTACTGTGCGAGAGATGTTCTTCCCGGGGTCGCTT  270
V  88.4% (221/250)  IGHV3-7*03   227  ....C...C..........A.......G.C....................GTG.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  16   ----------------------------------------------------------------------------------------..  17

                                      ------->                                  
                                      W  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13408  271  GGGGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
D  100.0% (6/6)     IGHD3-16*01  18   ....--------------------------------------  21
J  97.4% (37/38)    IGHJ4*02     11   ----...C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_103294

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_13409  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_13409  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_13409  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_13409  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_103295

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            307     1e-85
IGHD2-21*01                                                                                           18.0    0.61 
IGHJ3*01                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD2-21*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	CAAGAATTACAAGTT	TGGTGATGATCGCTA	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGGGACAAGAATTACAAGTTTGGTGATGATCGCTACTATGATGCTTTTGATTTG	TRDKNYKFGDDRYYDAFDL	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  T  Y  W  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_13410  1    GGTCCCTGAGACTCTCCTGTGCTGCCTCAGGTTTCACCTTTGGCACCTATTGGATGACATGGATCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  89.2% (223/250)  IGHV3-7*01   47   ......................A.....T..A.........A.T.G...........GC...G......................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  G  D  G  S  K  T  Y  Y  V  D  S  V  K  G  R  L  T  I  S  R  D  N  A  
                    Query_13410  91   AGTGGGTGGCCAATATAAAAGGAGATGGAAGTAAGACATACTATGTGGATTCTGTGAAGGGCCGCCTCACCATCTCCAGAGACAATGCCA  180
V  89.2% (223/250)  IGHV3-7*01   137  .............C.....GCA..........G...A............C..............AT...................C....  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  F  Y  Y  C  T  R  D  K  N  Y  K  F  G  
                    Query_13410  181  GGAACTCACTGTATCTGCAAATGAACAGCCTCAGAGTCGAGGACACGGCTTTTTATTACTGTACGAGGGACAAGAATTACAAGTTTGGTG  270
V  89.2% (223/250)  IGHV3-7*01   227  A..............................G....C.............G.G.........G....A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  86.7% (13/15)    IGHD2-21*01  10   -------------------------------------------------------------------------------------.....  14

                                      -IMGT----------------------->                                  
                                      D  D  R  Y  Y  D  A  F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13410  271  ATGATCGCTACTATGATGCTTTTGATTTGTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  333
D  86.7% (13/15)    IGHD2-21*01  15   G....T....-----------------------------------------------------  24
J  96.0% (48/50)    IGHJ3*01     1    -------------.............G.C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_103297

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           319     2e-89
IGHD3-10*01                                                                                           18.0    0.61 
IGHJ1*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-10*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAGGTTC	TTACTATGCTTC	CCCTGGTTATGGCCGAGAC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGTTCTTACTATGCTTCCCCTGGTTATGGCCGAGACGCTGAATACTTCCAGCAC	ARLGSYYASPGYGRDAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  Y  Y  W  S  W  V  R  Q  T  P  G  R  G  L  E 
                    Query_13411  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGGTTACTACTGGAGCTGGGTCCGGCAGACCCCAGGGAGGGGACTGGAG  90
V  91.8% (224/244)  IGHV4-59*08  49   ..........................................A.................A........C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  I  H  Y  R  G  S  T  H  Y  T  P  S  L  K  P  R  V  T  I  S  L  D  T  S  K  T 
                    Query_13411  91   TGGCTTGGCTATATCCATTACAGGGGGAGCACCCACTACACCCCCTCCCTCAAGCCTCGAGTCACCATTTCATTAGACACCTCCAAGACC  180
V  91.8% (224/244)  IGHV4-59*08  139  ...A....G......T.......T.........A......A.............AG............A...G.......G.......A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  G  S  Y  Y  A  S  P  G 
                    Query_13411  181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCGTCTATTATTGTGCGAGACTAGGTTCTTACTATGCTTCCCCTGGT  270
V  91.8% (224/244)  IGHV4-59*08  229  .............A......C..........................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD3-10*01  4    -----------------------------------------------------------------------........G...-------  15

                                      MGT-------------------------->                                  
                                       Y  G  R  D  A  E  Y  F  Q  H  W  G  H  G  T  Q  V  A  V  S  S  
                    Query_13411  271  TATGGCCGAGACGCTGAATACTTCCAGCACTGGGGCCACGGCACCCAGGTCGCCGTCTCCTCAG  334
J  94.2% (49/52)    IGHJ1*01     1    ------------..........................G.......T....A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_103290

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            382     3e-108
IGHD3-22*01                                                                                           19.9    0.16  
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTCTTATTACGGTATGGACGTC	AREKTAAVVIDYSYYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  S  Y  W  M  S  W  V  R  Q  A  T  G  K  G  L  
                    Query_13412  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGAAGCTATTGGATGAGCTGGGTCCGCCAGGCTACAGGGAAGGGGCTGG  90
V  98.8% (247/250)  IGHV3-7*01   47   ...........................................T..............................C...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  
                    Query_13412  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCA  180
V  98.8% (247/250)  IGHV3-7*01   137  ..................................................................T.......................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  
                    Query_13412  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTA  270
V  98.8% (247/250)  IGHV3-7*01   227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD3-22*01  17   ----------------------------------------------------------------------------------........  24

                                      -IMGT----------------------->                                 
                                      I  D  Y  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13412  271  TTGACTACTCTTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  100.0% (10/10)   IGHD3-22*01  25   ..------------------------------------------------------------  26
J  94.9% (56/59)    IGHJ6*02     4    ---......AC..C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_103291

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           300     8e-84
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCGGGTCCT	TATAGTGGGAGC	CCGCAAGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACTTC	AKPGPYSGSPQGYFDF	239	286	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	25	11	10	1	0	90.9
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	49	2	0	96.1
CDR2-IMGT	101	124	24	16	8	0	66.7
FR3-IMGT	125	238	114	109	5	0	95.6
CDR3-IMGT (germline)	239	244	6	6	0	0	100
Total	N/A	N/A	230	211	19	0	91.7


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  S  T  F  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  T  I  
                    Query_13413  15   GTACAGCCTCTGGATTCACCTTTAGCACCTTCGCCATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAACTATTA  104
V  91.7% (211/230)  IGHV3-23*01  65   ..G........................G..AT........C..........................................G......  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      T  E  T  G  R  N  S  Y  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  K  S  K  N  T  L  Y  L  
                    Query_13413  105  CTGAGACTGGTCGTAATTCATACTACGCAGACTCCGTGAAGGGCCGCTTCATCATCTCCAGAGACAAGTCCAAGAACACACTGTATCTGC  194
V  91.7% (211/230)  IGHV3-23*01  155  G..GT.G....G...GCA............................G....C...............T...........G..........  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-------------------CDR3-IMGT-----------------
                                      Q  M  N  T  L  R  A  E  D  T  A  V  Y  Y  C  A  K  P  G  P  Y  S  G  S  P  Q  G  Y  F  D  
                    Query_13413  195  AAATGAACACCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAACCGGGTCCTTATAGTGGGAGCCCGCAAGGGTACTTTGACT  284
V  91.7% (211/230)  IGHV3-23*01  245  .........G........................................----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (12/12)   IGHD1-26*01  3    -----------------------------------------------------------............-------------------  14
J  97.8% (45/46)    IGHJ4*02     3    --------------------------------------------------------------------------------..........  12

                                      ->                                  
                                      F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13413  285  TCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  320
J  97.8% (45/46)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_103292

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           302     3e-84
IGHD1-7*01                                                                                            27.6    7e-04
IGHJ5*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-7*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	CCCCTGG	ATAACTGGAACTAC	AGGA	TCGCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACCCCTGGATAACTGGAACTACAGGATCGCCTCT	AKPLDNWNYRIAS	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	131	27	23	1	3	85.2
FR3-IMGT	132	245	114	103	11	0	90.4
CDR3-IMGT (germline)	246	251	6	6	0	0	100
Total	N/A	N/A	251	224	24	3	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  L  Y  S  Y  P  M  N  W  V  R  Q  A  T  G  K  G  L  
                    Query_13414  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCCTTTACAGTTATCCCATGAACTGGGTCCGCCAGGCTACAGGGAAGGGGCTGG  90
V  89.2% (224/251)  IGHV3-23*01  47   ....................................C.T..AG...C...G......G................C...............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><--------CDR2-IMGT--------><------------------------------------------------
                                      E  W  I  S  S  I  S  G  S  G  G  G  S  T  H  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  
                    Query_13414  91   AGTGGATCTCTTCGATTAGTGGCAGTGGTGGTGGCAGCACACACTACGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAATT  180
V  89.2% (224/251)  IGHV3-23*01  137  .....G....AG.T........T.........---......T.............C....A......G......................  223
                                      E  W  V  S  A  I  S  G  S  G  G     S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  

                                      ----FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT-
                                      S  K  N  T  I  S  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  K  P  L  D  N  W  N  
                    Query_13414  181  CCAAGAACACAATTAGTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCATATATTATTGTGCGAAACCCCTGGATAACTGGAACT  270
V  89.2% (224/251)  IGHV3-23*01  224  ..........GC.GTA.....................................G.......C.........-------------------  294
                                      S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                    
D  100.0% (14/14)   IGHD1-7*01   4    ------------------------------------------------------------------------------............  15

                                      ------------->                                  
                                      Y  R  I  A  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13414  271  ACAGGATCGCCTCTTGGGGCCAAGGAACCCTGGTCACCGTCTCCTCAG  318
D  100.0% (14/14)   IGHD1-7*01   16   ..----------------------------------------------  17
J  95.2% (40/42)    IGHJ5*01     10   ------...A...C..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_72869

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD5-12*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTC	TATAGTGGCTAC	CAGAAAGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCTATAGTGGCTACCAGAAAGTTTTTGACTCT	ARFYSGYQKVFDS	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	76	74	70	4	0	94.6
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	104	10	0	91.2
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	293	269	24	0	91.8


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  P  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  K  F  S  
                    Query_13415  3    AGATGCAGCTGGTGCAGTCTGGACCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAAGTTTTCCA  92
V  91.8% (269/293)  IGHV5-51*01  2    ..G....................G.........................................A...G...........GC...A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  V  A  I  I  Y  P  A  D  S  T  T  R  Y  
                    Query_13415  93   GTTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGGTGGCAATCATCTATCCTGCTGACTCTACTACCCGATACA  182
V  91.8% (269/293)  IGHV5-51*01  92   .C................................................A...GG.............G.......GA....A......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  L  Q  G  Q  V  T  I  S  A  D  K  S  T  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  
                    Query_13415  183  GTCCGTCCCTCCAAGGGCAGGTCACCATCTCAGCCGACAAGTCCACCAGTACCGCCTTCCTGCAGTGGAGTAGCCTGAAGGCCTCGGACA  272
V  91.8% (269/293)  IGHV5-51*01  182  .C......T.......C............................T...C.......A............C...................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><--------------CDR3-IMGT-------------->                                  
                                      T  A  T  F  Y  C  A  R  F  Y  S  G  Y  Q  K  V  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13415  273  CCGCCACGTTTTACTGTGCGAGATTCTATAGTGGCTACCAGAAAGTTTTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  362
V  91.8% (269/293)  IGHV5-51*01  272  ......T..A.............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD5-12*01  6    --------------------------............----------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    -----------------------------------------------.......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_72868

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           394     7e-112
IGHD3-10*01                                                                                           21.8    0.047 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTGGAATACC	TATTATTATAATTCGGGGAG	CCGATA	TGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTGGAATACCTATTATTATAATTCGGGGAGCCGATATGACCAC	ARDWNTYYYNSGSRYDH	289	339	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	48	3	0	94.1
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	106	8	0	93
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	274	22	0	92.6


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  V  S  G  Y  T  Y  I 
                    Query_13416  1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGTTTCTGGTTACACCTATATC  90
V  92.6% (274/296)  IGHV1-18*04  1    ...G.T................................................................C..............T..C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  F  E  W  M  G  W  I  S  T  Y  N  G  D  T  K  Y 
                    Query_13416  91   GACTACGGAATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGTTTGAGTGGATGGGTTGGATCAGCACTTACAACGGTGACACAAAGTAT  180
V  92.6% (274/296)  IGHV1-18*04  91   AG......T.....C...........................C.............A.........G.......T...A.......C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  V  Q  G  R  V  S  M  T  T  D  S  S  T  S  T  V  H  M  E  L  R  S  L  R  S  D  D 
                    Query_13416  181  GCACAGAAGGTCCAGGGCAGAGTCAGCATGACCACAGACTCATCCACGAGCACAGTCCACATGGAACTGAGGAGCCTGAGATCTGACGAC  270
V  92.6% (274/296)  IGHV1-18*04  181  .........C...............C.............A...............C.T.......G........................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><--------------------CDR3-IMGT-------------------->                     
                                       T  A  V  Y  Y  C  A  R  D  W  N  T  Y  Y  Y  N  S  G  S  R  Y  D  H  W  G  Q  G  S  L  V 
                    Query_13416  271  ACGGCCGTTTATTACTGTGCGAGAGATTGGAATACCTATTATTATAATTCGGGGAGCCGATATGACCACTGGGGCCAGGGATCCCTGGTC  360
V  92.6% (274/296)  IGHV1-18*04  271  ........G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  85.0% (17/20)    IGHD3-10*01  2    ------------------------------------.....C...GG.........----------------------------------  21
J  95.1% (39/41)    IGHJ4*02     8    --------------------------------------------------------------....T..............A........  35

                                                   
                                       T  V  S  S  
                    Query_13416  361  ACCGTCTCCTCAG  373
J  95.1% (39/41)    IGHJ4*02     36   .............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_103299

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           321     7e-90
IGHD1-7*01                                                                                            19.9    0.17 
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-7*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCTGCTGGCCTTAA	AACTGGAACT	TCCGCCTACCTCTT	CTACA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTGCTGGCCTTAAAACTGGAACTTCCGCCTACCTCTTCTACAGTTTGGACGTC	ARSAGLKTGTSAYLFYSLDV	270	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	47	3	0	94
CDR1-IMGT	51	74	24	17	7	0	70.8
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	18	3	0	85.7
FR3-IMGT	147	269	123	106	8	9	86.2
CDR3-IMGT (germline)	270	275	6	6	0	0	100
Total	N/A	N/A	275	242	24	9	88


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  S  S  E  T  L  S  L  T  C  T  V  S  G  D  S  F  T  S  *  Y  W  T  W  I  R  
                    Query_13417  1    CAGGACTGGTGAAGTCCTCGGAGACCCTGTCTCTCACCTGCACTGTCTCTGGTGACTCCTTTACTTCTTAGTACTGGACCTGGATCCGGC  90
V  88.0% (242/275)  IGHV4-59*01  26   ..............C.T..............C......................G....A.C.G.AG...C.......G...........  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  M  E  W  I  G  Y  I  Y  D  S  E  T  T  N  Y  T  N  Y  N  P  S  L  K  S  
                    Query_13417  91   AGCCCCCAGGGAAGGGAATGGAGTGGATTGGCTATATCTATGACAGTGAGACCACCAACTACACCAACTATAACCCCTCCCTCAAGAGTC  180
V  88.0% (242/275)  IGHV4-59*01  116  .................C.............G.........T......G..G..........---------...................  196
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y           N  P  S  L  K  S  

                                      -----------------------FR3-IMGT---------------------------------------------------------><
                                      R  V  T  F  S  V  D  T  S  M  N  H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  
                    Query_13417  181  GAGTCACCTTTTCAGTAGACACGTCCATGAATCACTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTG  270
V  88.0% (242/275)  IGHV4-59*01  197  ........A.A................A...C..G................GC...............................A.....  286
                                      R  V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  

                                      -------------------------CDR3-IMGT------------------------>                               
                                      A  R  S  A  G  L  K  T  G  T  S  A  Y  L  F  Y  S  L  D  V  W  G  Q  G  T  P  V  T  V  S  
                    Query_13417  271  CGAGATCTGCTGGCCTTAAAACTGGAACTTCCGCCTACCTCTTCTACAGTTTGGACGTCTGGGGCCAAGGGACCCCCGTCACCGTCTCCT  360
V  88.0% (242/275)  IGHV4-59*01  287  .....-------------------------------------------------------------------------------------  291
                                      A  R                                                                                      
D  100.0% (10/10)   IGHD1-7*01   6    -------------------..........-------------------------------------------------------------  15
J  91.8% (45/49)    IGHJ6*02     14   -------------------------------------------....G..A.......................A.G.............  60

                                        
                                      S 
                    Query_13417  361  CA  362
J  91.8% (45/49)    IGHJ6*02     61   ..  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_231711

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           350     8e-99
IGHD2-21*02                                                                                           14.1    8.5  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CATCGAACGTCACTATTTTTA	TGGTGCCTGC	CCTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACATCGAACGTCACTATTTTTATGGTGCCTGCCCTGGCTAC	AKDIERHYFYGACPGY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13418  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-30*18  47   ..............................................C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  F  D  G  S  N  R  N  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13418  91   AGTGGGTGGCACTTATATCCTTTGATGGAAGTAACAGAAATCATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (237/250)  IGHV3-30*18  137  ...........G.......A.A............T.A.T.CT................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  I  E  R  H  Y  F  
                    Query_13418  181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGACCTGAAGACACGGCTGTATATTACTGTGCGAAAGACATCGAACGTCACTATTTTT  270
V  94.8% (237/250)  IGHV3-30*18  227  ...A...............................G....G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      T------------------>                                 
                                      Y  G  A  C  P  G  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_13418  271  ATGGTGCCTGCCCTGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  323
D  90.0% (9/10)     IGHD2-21*02  13   -.....A....------------------------------------------  22
J  100.0% (37/37)   IGHJ4*02     11   ----------------.....................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_268389

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-73*01                                                                                           377     9e-107
IGHD2-2*01                                                                                            18.0    0.60  
IGHJ6*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-73*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAC	TCACGATTGGAA	TACCAGGTGCTA	AGGGGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGACTCACGATTGGAATACCAGGTGCTAAGGGGGACGGTGTGGACGTC	ARLTIGIPGAKGDGVDV	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	255	7	6	1	0	85.7
Total	N/A	N/A	255	248	7	0	97.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  
                    Query_13419  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCTTCAGTGGCTCTGCTATGCACTGGGTCCGCCAGGCTTCCGGGAAAGGGCTGG  90
V  97.3% (248/255)  IGHV3-73*01  47   .........A................................................................................  136
                                         S  L  K  L  S  C  A  A  S  G  F  T  F  S  G  S  A  M  H  W  V  R  Q  A  S  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  R  S  K  T  N  N  Y  A  T  A  Y  A  A  S  V  R  G  R  F  T  I  S  R  D  
                    Query_13419  91   AGTGGGTTGGCCGTATTAGAAGCAAAACTAACAATTACGCGACAGCATATGCTGCGTCGGTGAGAGGCAGGTTCACCATCTCCAGAGATG  180
V  97.3% (248/255)  IGHV3-73*01  137  ..........................G......G.............................A..........................  226
                                      E  W  V  G  R  I  R  S  K  A  N  S  Y  A  T  A  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  K  N  T  A  F  L  Q  M  N  S  L  I  T  E  D  T  A  V  Y  Y  C  A  R  L  T  I  G  I  
                    Query_13419  181  ATTCAAAGAACACGGCGTTTCTGCAAATGAACAGCCTGATAACCGAGGACACGGCCGTGTATTACTGTGCTAGACTCACGATTGGAATAC  270
V  97.3% (248/255)  IGHV3-73*01  227  ..................A....................A............................A......---------------  301
                                      D  S  K  N  T  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  91.7% (11/12)    IGHD2-2*01   16   ---------------------------------------------------------------------------------------...  18

                                      DR3-IMGT-------------------->                                 
                                      P  G  A  K  G  D  G  V  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_13419  271  CAGGTGCTAAGGGGGACGGTGTGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  332
D  91.7% (11/12)    IGHD2-2*01   19   ...C.....-----------------------------------------------------  27
J  95.7% (45/47)    IGHJ6*02     16   ---------------.....A..............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_145955

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           413     2e-117
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	69	2	0	97.2
CDR1-IMGT	77	100	24	23	1	0	95.8
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	107	7	0	93.9
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	292	278	14	0	95.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  
                    Query_13420  6    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACT  95
V  95.2% (278/292)  IGHV5-51*01  5    ..............................A...................................G....................G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  
                    Query_13420  96   ACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCC  185
V  95.2% (278/292)  IGHV5-51*01  95   .........G...........................C....................C...................C...........  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  R  K  A  W  D  T  
                    Query_13420  186  CGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCGGAAGGCCTGGGACACCG  275
V  95.2% (278/292)  IGHV5-51*01  185  ........C.....................................C...........G......A......T........C........  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------------CDR3-IMGT----------------------->                   
                                      A  I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  
                    Query_13420  276  CCATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGG  365
V  95.2% (278/292)  IGHV5-51*01  275  ....G.................--------------------------------------------------------------------  296
                                      A  M  Y  Y  C  A  R                                                                       
D  92.9% (13/14)    IGHD1-26*01  4    ------------------------------..........C...----------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    -----------------------------------------------.......A...................................  48

                                                    
                                      V  T  V  S  S 
                    Query_13420  366  TCACCGTCTCCTCA  379
J  98.2% (56/57)    IGHJ6*02     49   ..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_145954

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           343     2e-96
IGHD3-3*01                                                                                            14.1    8.1  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_13421  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGCC  93
V  94.3% (233/247)  IGHV4-31*02  50   .....TCC...A.....................C......C.............................C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  
                    Query_13421  94   TGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGCAGACACGTCTA  183
V  94.3% (233/247)  IGHV4-31*02  140  ....G.........T.C.............................................................T...........  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  
                    Query_13421  184  AGAACCAGTTCTCCCTGAGGCTCAGCTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCG  273
V  94.3% (233/247)  IGHV4-31*02  230  ..................A...G................................T...........-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  100.0% (51/51)   IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13421  274  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (51/51)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_145957

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_13422  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.2% (241/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13422  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.2% (241/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_13422  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.2% (241/248)  IGHV4-31*03  229  ...................................T................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13422  271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_145956

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           333     1e-93
IGHD2-2*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCC	AGTACCA	AATAGCAGGCCAATACCCACC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGCCAGTACCAAATAGCAGGCCAATACCCACCCTTTGACTTC	VRGQYQIAGQYPPFDF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	231	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  L  T  D  Y  A  M  Y  W  V  R  Q  A  P  G  K  G  P  
                    Query_13423  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTGACTGACTATGCAATGTACTGGGTCCGCCAGGCTCCAGGCAAGGGGCCGG  90
V  92.8% (231/249)  IGHV3-30*03  47   ....................................C...C.G.AG.....GC...C..............................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  S  Y  H  G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  
                    Query_13423  91   AGTGGGTGGCCCTTATATCATATCATGGAAGTAATAAATTCTATGCAGACTCCGTGAAGGGCCGATTTACCATCTCCAGAGACATTTCCA  180
V  92.8% (231/249)  IGHV3-30*03  137  ..........AG...........G...............A...........................C................A.....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  G  Q  Y  Q  I  A  G  
                    Query_13423  181  AGAGCACGCTATATCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGTGAGAGGCCAGTACCAAATAGCAGGCC  270
V  92.8% (231/249)  IGHV3-30*03  227  ...A......G....................................................C.....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-2*01   14   ------------------------------------------------------------------------.......-----------  20

                                      T------------------>                                  
                                      Q  Y  P  P  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13423  271  AATACCCACCCTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.7% (43/44)    IGHJ4*02     5    ----------........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_145953

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           327     9e-92
IGHD3-10*01                                                                                           10.3    118  
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGA	TCGGG	CTA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGATCGGGCTATGATGCTTTTGATCTC	ARVRSGYDAFDL	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_13424  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTTCTATAACATGCACTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGG  90
V  92.0% (229/249)  IGHV3-21*01  47   ............................................AG.....G....A..............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  T  T  S  E  F  I  Y  Y  P  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_13424  91   AGTGGGTCTCATCCATTAGTACTACTAGTGAGTTCATATATTACCCAGACTCAGTGAAGGGCCGATTCACCGTCTCCAGGGACAACGCCA  180
V  92.0% (229/249)  IGHV3-21*01  137  .....................G..G....AGT.A......C...G..........................A.......A..........  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  F  L  Q  M  N  S  L  S  A  E  D  T  A  L  Y  Y  C  A  R  V  R  S  G  Y  D  A  
                    Query_13424  181  AGAACTCACTGTTTCTGCAGATGAACAGCCTGAGCGCCGAGGACACGGCTCTCTATTACTGTGCGAGAGTCCGATCGGGCTATGATGCTT  270
V  92.0% (229/249)  IGHV3-21*01  227  ............A......A..............A...............G.G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   --------------------------------------------------------------------------.....-----------  18
J  96.0% (48/50)    IGHJ3*01     1    ----------------------------------------------------------------------------------........  8

                                      ------->                                  
                                      F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13424  271  TTGATCTCTGGGGCCAGGGGACAATGGTCACCGTCTCTTCAG  312
J  96.0% (48/50)    IGHJ3*01     9    .....G..........A.........................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_145952

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCTT	TTCGGGGA	A	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTCTTTTCGGGGAAAACTGGTTCGGCCCC	ARRLFGENWFGP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	243	117	103	11	3	88
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	224	22	3	90


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Q  I  W  W  S  W  V  R  Q  A  P  G  K  G  L 
                    Query_13425  1    ACCCTGTCCCTCACCTGCACTGTTTCTGGTGGCTCCATCAGCAGTCAGATCTGGTGGAGTTGGGTCCGCCAGGCCCCAGGGAAGGGGCTT  90
V  90.0% (224/249)  IGHV4-4*02   49   ..................G....C.....................AGT.A......................C................G  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><-----------------------------------------------------
                                       E  W  I  G  E  I  L  H  S  G  S  T  T  T  Y  I  P  S  L  E  S  R  V  T  I  S  I  D  K  S 
                    Query_13425  91   GAGTGGATTGGGGAAATCCTTCATAGCGGGAGCACCACCACTTACATCCCGTCCCTCGAGAGTCGAGTCACCATCTCAATCGACAAGTCC  180
V  90.0% (224/249)  IGHV4-4*02   139  ..................TA......T..........A.---....A..........A................A...G.A.........  225
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N     Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S 

                                      FR3-IMGT------------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  R  L  R  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  R  L  F  G  E  N  W 
                    Query_13425  181  AAGAACCAGTTCTCCCTGAGGCTGAGGTCTGTGACCGCCGCGGACACGGCCATATATTATTGTGCGAGACGTCTTTTCGGGGAAAACTGG  270
V  90.0% (224/249)  IGHV4-4*02   226  ...................A......C........................G.G.....C.........---------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-10*01  13   ---------------------------------------------------------------------------........-------  20
J  95.9% (47/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  G  P  W  G  R  G  T  L  V  T  V  S  S  
                    Query_13425  271  TTCGGCCCCTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  313
J  95.9% (47/49)    IGHJ5*02     9    ....A...........A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_145959

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           244     7e-67
IGHD4-17*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	CCGAAATGCGAACCCAGAC	GACTACAATGACTAC	GGAAACGGCTTCTATTTT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCCGAAATGCGAACCCAGACGACTACAATGACTACGGAAACGGCTTCTATTTTTACGGCACGGACGTC	ARNANPDDYNDYGNGFYFYGTDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	87	27	0	76.3
CDR3-IMGT (germline)	243	244	2	2	0	0	100
Total	N/A	N/A	244	200	44	0	82


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  V  S  G  F  T  F  R  S  H  G  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_13426  1    GGTCCCTGAGACTCTCCTGTGAAGTCTCTGGATTCACATTCCGTTCCCACGGCATGCATTGGGTCCGTCAGGTGCCAGGCAAGGGGCTGG  90
V  82.0% (200/244)  IGHV3-30*03  47   .....................C..C............C...A..AG.T.T........C........C....CT................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  G  K  E  Y  Y  A  E  S  V  K  G  R  F  I  V  S  R  D  N  S  
                    Query_13426  91   AGTGGGTGGCAGTTATTTCGTATGATGGAGGTAAGGAATATTACGCAGAGTCTGTTAAGGGCCGCTTCATCGTCTCCAGAGACAATTCTA  180
V  82.0% (200/244)  IGHV3-30*03  137  ................A..A.........A....TA....C..T.....C..C..G........A....C.A................C.  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  D  I  L  Y  L  Q  M  N  G  L  K  L  G  D  T  A  I  Y  Y  C  A  R  N  A  N  P  D  D  Y  
                    Query_13426  181  AGGATATCCTATATCTTCAAATGAATGGCCTGAAACTCGGAGACACGGCCATTTATTATTGTGCCCGAAATGCGAACCCAGACGACTACA  270
V  82.0% (200/244)  IGHV3-30*03  227  ..A.C.CG..G.....G........CA......G.GCT.AG........TG.G.....C.....--------------------------  290
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  86.7% (13/15)    IGHD4-17*01  2    -----------------------------------------------------------------------------------......G  8

                                      --CDR3-IMGT----------------------------->                             
                                      N  D  Y  G  N  G  F  Y  F  Y  G  T  D  V  W  G  Q  G  T  T  V  A  V  S
                    Query_13426  271  ATGACTACGGAAACGGCTTCTATTTTTACGGCACGGACGTCTGGGGCCAAGGGACCACGGTCGCCGTCTC  340
D  86.7% (13/15)    IGHD4-17*01  9    G.......--------------------------------------------------------------  16
J  93.2% (41/44)    IGHJ6*02     15   --------------------------.....T.T............................A.......  58


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_145958

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           322     2e-90
IGHD5-12*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGCGGGA	TGGCTAC	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGACAGGTGCGGGATGGCTACCTGACTAC	VTGAGWLPDY	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	44	7	0	86.3
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	5	2	0	71.4
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  S  G  Y  Y  L  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13427  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAGTGGTTATTATTTGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  92.2% (225/244)  IGHV4-59*01  49   ......................................C...A....C..C.G..G.................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  L  I  S  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_13427  91   TGGCTTGGTTTGATCTCTTACAGCGGGAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAACAAC  180
V  92.2% (225/244)  IGHV4-59*01  139  ...A....G.AT....A......T.....C........................................................G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  L  Y  Y  C  V  T  G  A  G  W  L  P  D  Y  W 
                    Query_13427  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCCTGTATTATTGTGTGACAGGTGCGGGATGGCTACCTGACTACTGG  270
V  92.2% (225/244)  IGHV4-59*01  229  .............................................G.......C....C..G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD5-12*01  11   ------------------------------------------------------------------------.......-----------  17
J  100.0% (41/41)   IGHJ4*02     8    --------------------------------------------------------------------------------..........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_13427  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (41/41)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_113255

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*03                                                                                           335     4e-94
IGHD2-8*01                                                                                            21.8    0.041
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*03	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGCCTGG	ATTGCACTGATGGTGTCTGTTAT	GCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATCGCCTGGATTGCACTGATGGTGTCTGTTATGCTTTTGACCAA	VKDRLDCTDGVCYAFDQ	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  N  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13428  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACATTCAGTAACTATGCTATGCACTGGGTCCGCCAGGCTCCTGGGAAGGGACTGG  90
V  92.8% (232/250)  IGHV3-64*03  47   ....................TC...............C.......G..............................A.............  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  Y  V  S  A  I  S  P  N  G  G  S  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13428  91   AATATGTTTCAGCGATTAGTCCTAATGGAGGCAGTACATACTTCGCAGACTCAGTGAAGGGCAGATTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-64*03  137  .............T......AG......G..T..C.......A...............................................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  L  Y  Y  C  V  K  D  R  L  D  C  T  D  
                    Query_13428  181  GGAACACTCTATATCTCCAAATGAGCAGTCTGAGAGCTGAGGACACGGCTCTCTATTACTGTGTGAAAGATCGCCTGGATTGCACTGATG  270
V  92.8% (232/250)  IGHV3-64*03  227  A......G..G...G...................................G.G.................--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  82.6% (19/23)    IGHD2-8*01   6    ------------------------------------------------------------------------------....T...A...  17

                                      GT-------------------->                                  
                                      G  V  C  Y  A  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13428  271  GTGTCTGTTATGCTTTTGACCAATGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  82.6% (19/23)    IGHD2-8*01   18   ....A..C...----------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    --------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_113254

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            330     1e-92
IGHD4-17*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	105	9	0	92.1
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	227	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_13429  1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  93.4% (227/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       G  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_13429  91   GGGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  93.4% (227/243)  IGHV4-4*02   139  .A.................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  F  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_13429  181  AACCAGTTCTCCCTGATACTGACCTTTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  93.4% (227/243)  IGHV4-4*02   229  ................AG....G..C.....................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13429  271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_296813

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_13430  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.0% (214/246)  IGHV4-4*01   49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  R  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_13430  91   GAGCGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.0% (214/246)  IGHV4-4*01   139  ...T..........A...T.....A.T..GAG............C.........A.............................T...AG  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_13430  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.0% (214/246)  IGHV4-4*01   229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01   13   ----------------------------------------------------------------------.....C..G...--------  24

                                      ----------->                                  
                                       G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_13430  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_296812

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           371     7e-105
IGHD2-15*01                                                                                           21.8    0.043 
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGGGTATTCTGTTGC	GGTGGTAGGTGCTA	GTG	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGGGTATTCTGTTGCGGTGGTAGGTGCTAGTGACAACTGGTTCGACCCC	ARHGGYSVAVVGASDNWFDP	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	111	3	0	97.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  I  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_13431  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATAGTATTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  97.2% (244/251)  IGHV4-39*01  49   .........................................C.G.....G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13431  91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGTCC  180
V  97.2% (244/251)  IGHV4-39*01  139  ..........................................................................................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  V  S  L  K  L  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  H  G  G  Y  S  V  A 
                    Query_13431  181  AAGAATCAGGTCTCCCTGAAGCTGAGCTCTATGACCGCCGCAGACACGGCTGTGTATTACTGTGCGAGACATGGCGGGTATTCTGTTGCG  270
V  97.2% (244/251)  IGHV4-39*01  229  .....C...T....................G........................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  92.9% (13/14)    IGHD2-15*01  14   -----------------------------------------------------------------------------------------.  14

                                      DR3-IMGT------------------------>                                  
                                       V  V  G  A  S  D  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13431  271  GTGGTAGGTGCTAGTGACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  337
D  92.9% (13/14)    IGHD2-15*01  15   .......C.....------------------------------------------------------  27
J  100.0% (51/51)   IGHJ5*02     1    ----------------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_296815

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            276     3e-76
IGHD1-26*01                                                                                           10.3    118  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAACTTTCGCGACATAT	GAGCT	CCA	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAACTTTCGCGACATATGAGCTCCATATGGACGTC	AKTFATYELHMDV	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	22	7	0	75.9
CDR1-IMGT	30	56	27	24	3	0	88.9
FR2-IMGT	57	107	51	47	4	0	92.2
CDR2-IMGT	108	128	21	17	4	0	81
FR3-IMGT	129	242	114	97	17	0	85.1
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	211	35	0	85.8


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  T  V  P  G  G  S  V  S  S  H  N  W  W  T  W  V  R  Q  P  P  G  K  G  
                    Query_13432  1    GGTCCCTGAGACTCTCCTGCACTGTCCCTGGTGGCTCCGTCAGCAGTCATAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGTAAGGGCC  90
V  85.8% (211/246)  IGHV4-4*02   47   ..A.....TCC...A.....G.....T...........A........AG...........G.....................G.....G.  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  N  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  M  S  M  A  K  L  
                    Query_13432  91   TGGAGTGGATTGGAGAAATCTATCATAACGGCAACACCAACTACAACCCGTCCCTCCAGAGTCGGGTCACCATGTCAATGGCCAAGTTGA  180
V  85.8% (211/246)  IGHV4-4*02   137  .............G.............GT..G.G......................A.......A........A...G.A.A.....CC.  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  Q  C  F  L  K  L  N  D  A  T  A  A  D  T  A  V  Y  Y  C  A  K  T  F  A  T  Y  E  L  
                    Query_13432  181  AGAATCAGTGCTTCCTGAAACTGAACGATGCGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAAAACTTTCGCGACATATGAGCTCC  270
V  85.8% (211/246)  IGHV4-4*02   227  ....C....T..C......G....G.TC..T.....................G.............------------------------  292
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD1-26*01  11   -----------------------------------------------------------------------------------.....--  15

                                      ---------->                                 
                                      H  M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_13432  271  ATATGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  314
J  97.7% (42/43)    IGHJ6*02     20   -................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_113250

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           402     3e-114
IGHD2-21*01                                                                                           14.1    9.5   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	ATTTTGGTGG	ATAGAGATAGAGTTCC	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTC	ARGGFWWIEIEFRMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  Y 
                    Query_13433  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACCGACTAT  91
V  94.5% (273/289)  IGHV1-18*01  7    .............................................................................C......AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  W  I  S  A  Y  T  G  N  T  K  N  A  Q 
                    Query_13433  92   GGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGGTGGGATGGATCAGCGCTTACACTGGTAATACAAAAAATGCACAA  181
V  94.5% (273/289)  IGHV1-18*01  97   .......G...........................G.........A.....................A......C.....CT.......G  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  V  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_13433  182  AAAGTCCAGGGCAGAGTGACCATGACCACAGACACATCCACGAGAACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  94.5% (273/289)  IGHV1-18*01  187  ..GC.............C..........................C...............C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  G  G  F  W  W  I  E  I  E  F  R  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_13433  272  GTGTATTACTGTGCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  361
V  94.5% (273/289)  IGHV1-18*01  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD2-21*01  6    -----------------------...G......---------------------------------------------------------  15
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------.........................................  59

                                         
                                       S 
                    Query_13433  362  TCA  364
J  100.0% (44/44)   IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_296817

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           353     9e-100
IGHD3-10*01                                                                                           19.9    0.16  
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TAAA	ATGGTTCGGG	ACTGGTGGGATAGTGAA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAAAATGGTTCGGGACTGGTGGGATAGTGAATTTGACTAC	AKDKMVRDWWDSEFDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  A  M  I  W  V  R  Q  A  P  G  K  G  L  
                    Query_13434  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACCTTTAGCAACTATGCCATGATCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-23*01  47   ............................T................G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  S  A  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13434  91   AGTGGGTCTCAGGTATTAGTGGTAGTGGTGGGAGCGCATATTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  95.2% (238/250)  IGHV3-23*01  137  ............C..................T...A....C............................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  D  S  L  R  A  A  D  T  A  V  Y  Y  C  A  K  D  K  M  V  R  D  W  
                    Query_13434  181  AAAACACGCTGTATCTGCAAATGGACAGCCTGAGAGCCGCGGACACGGCCGTCTATTACTGTGCGAAAGATAAAATGGTTCGGGACTGGT  270
V  95.2% (238/250)  IGHV3-23*01  227  .G.....................A...............A............A.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-10*01  9    --------------------------------------------------------------------------..........------  18

                                      T------------------>                                  
                                      W  D  S  E  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13434  271  GGGATAGTGAATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (43/43)   IGHJ4*02     6    -----------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_113252

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           361     4e-102
IGHD1-1*01                                                                                            10.3    121   
IGHJ6*02                                                                                              114     2e-29 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD1-1*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCCCCA	GAACG	N/A	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCCCCAGAACGATTACTACTACTACTACGGTTTGGACGTC	ARGPQNDYYYYYGLDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	238	7	0	97.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  A  E  S  F  S  G  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13435  1    ACCCTGTCCCTCACCTGCGCTGTCTACGCTGAGTCCTTCAGTGGTTACTTCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  97.1% (238/245)  IGHV4-34*01  49   ..........................T.G..G.................A........................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  G  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  M  S  K  N 
                    Query_13435  91   TGGATTGGGGAAATCAATCATAGTGGAGGCACCAGCTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACATGTCCAAGAAC  180
V  97.1% (238/245)  IGHV4-34*01  139  ...........................A......A............................................C..........  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  Q  N  D  Y  Y  Y  Y 
                    Query_13435  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCCCCCAGAACGATTACTACTACTAC  270
V  97.1% (238/245)  IGHV4-34*01  229  .................................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (5/5)     IGHD1-1*01   11   -----------------------------------------------------------------------.....--------------  15
J  98.4% (61/62)    IGHJ6*02     1    ----------------------------------------------------------------------------..............  14

                                      -------------->                                 
                                       Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13435  271  TACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  98.4% (61/62)    IGHJ6*02     15   ......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_296818

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           322     2e-90
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_13436  1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_13436  91   CTAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-61*08  139  ..G..................T..T................C.................G.......TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N 
                    Query_13436  181  AGGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAAC  270
V  91.2% (228/250)  IGHV4-61*08  229  .A.................A.....GC..........................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G..G.....G.  22

                                      3-IMGT----------------------->                                  
                                       C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13436  271  TGCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  86.4% (19/22)    IGHD2-15*01  23   ......----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_113259

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD1-1*01                                                                                            18.0    0.59 
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCAGTG	GGTACAACT	TTGGGAAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGGTACAACTTTGGGAATAACTGGTTCGACCCG	ARDPTGSGYNFGNNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  S  H  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13437  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAGTCATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...............................G..........AG..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  K  G  G  I  T  N  H  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_13437  91   TGGATTGGATATGTCTATAAGGGCGGGATCACCAACCACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G...A.....T.CA.T....G.......T...................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  H  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_13437  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCTGACACGGCCATATATCACTGTGCGAGAGATCCTACCGGCAGTGGGTACAACTTT  270
V  93.5% (229/245)  IGHV4-59*01  229  ...................................G.........G.G...T.............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD1-1*01   1    -------------------------------------------------------------------------------.........--  9

                                      -------------------->                                  
                                       G  N  N  W  F  D  P  W  G  P  G  T  L  V  T  V  S  S  
                    Query_13437  271  GGGAATAACTGGTTCGACCCGTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  325
J  95.9% (47/49)    IGHJ5*02     3    ------..............C.......A..........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_113258

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           332     3e-93
IGHD2-21*02                                                                                           31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCGT	GCATTTTGTGGTGATGACTGCT	TCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCGTGCATTTTGTGGTGATGACTGCTTCCCCTTTGACTAC	ARRAFCGDDCFPFDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	227	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  F  N  I  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13438  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCTTCAACATTTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.8% (227/242)  IGHV4-59*08  49   ....................................A...GT.G............C.................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  S  Y  S  G  T  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  S  S  K  N 
                    Query_13438  91   TGGATTGGGTATATCTCTTACAGTGGGACCACCAACTACAACCCCTCCCTCGAGAGTCGAGTCACCATATCAGTAGACTCGTCCAAGAAT  180
V  93.8% (227/242)  IGHV4-59*08  139  ................A...........G......................A..........................A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  V  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  R  A  F  C  G  D  D  C  F 
                    Query_13438  181  CAGGTCTCCCTGAAACTGACCTCTGTGACCGCCGCAGACACGGCCATATATTACTGTGCGAGGCGTGCATTTTGTGGTGATGACTGCTTC  270
V  93.8% (227/242)  IGHV4-59*08  229  ...T..........G....G.........................G.G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  90.9% (20/22)    IGHD2-21*02  2    ------------------------------------------------------------------....A........G........--  23

                                      ----------->                                  
                                       P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13438  271  CCCTTTGACTACTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  316
J  97.7% (43/44)    IGHJ4*02     5    --..............................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_10438

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           338     5e-95
IGHD7-27*01                                                                                           19.9    0.17 
IGHJ3*01                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD7-27*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GG	CTAACTGGGG	TGGAAGGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCTAACTGGGGTGGAAGGGGCTTTTGATCTC	ARGLTGVEGAFDL	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	64	6	0	91.4
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	95	19	0	83.3
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	253	37	0	87.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  H  V  S  C  S  P  S  G  G  P  F  S  S  Y
                    Query_13439  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGCACGTCTCCTGCTCGCCTTCTGGAGGCCCCTTCAGCAGCTA  90
V  87.2% (253/290)  IGHV1-69*01  6    ..................G..............................A.G.........AA.G...........A.............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  F  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  M  P  N  L  Q  T  A  I  Y  A  Q
                    Query_13439  91   TGTTTTCACTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCATCATGCCTAACTTGCAAACAGCAATCTACGCCCA  180
V  87.2% (253/290)  IGHV1-69*01  96   ..C.A...GC............................................G.....C....T...TGGT.......A......A..  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  L  T  I  T  A  D  E  S  T  P  T  A  Y  M  K  L  T  S  L  K  S  D  D  T  A
                    Query_13439  181  GAAGTTCCAAGACAGACTTACCATTACCGCGGACGAATCTACGCCTACAGCCTACATGAAACTGACCAGCCTGAAATCTGACGACACGGC  270
V  87.2% (253/290)  IGHV1-69*01  186  .........G.G....G.C..G.................C...AGC............G.G....G........G......G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  F  C  A  R  G  L  T  G  V  E  G  A  F  D  L  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_13439  271  CGTCTATTTTTGTGCGAGAGGGCTAACTGGGGTGGAAGGGGCTTTTGATCTCTGGGGCCAAGGAACGTTGGTCATCGTCTCTTCAG  356
V  87.2% (253/290)  IGHV1-69*01  276  ...G....AC..........------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD7-27*01  1    ----------------------..........------------------------------------------------------  10
J  89.1% (41/46)    IGHJ3*01     5    ----------------------------------------.........G.............G..AA......C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_182699

Length=403
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           346     2e-97
IGHD2-15*01                                                                                           14.1    9.9  
IGHJ4*02                                                                                              60.3    3e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	GGCC	GGATATT	CATCTGATGGGCGTGAATATATGACCCCGTTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGGGCCGGATATTCATCTGATGGGCGTGAATATATGACCCCGTTGTTTGACTTT	SRAGYSSDGREYMTPLFDF	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	69	6	0	92
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	19	5	0	79.2
FR3-IMGT	176	289	114	98	16	0	86
CDR3-IMGT (germline)	290	294	5	4	1	0	80
Total	N/A	N/A	293	257	36	0	87.7


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I 
                    Query_13440  2    CAGGTGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGACAATCTCCTGCCAGGCTTCCGGTTACAGTTTTATC  91
V  87.7% (257/293)  IGHV1-18*04  1    .....T.................................................AGG........A.......T.......CC....C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  G  P  H  K  G  N  T  K  Y 
                    Query_13440  92   AACTACGGTATCAGTTGGGTGCGACAGGCCCCTGGACAGGGGCTCGAGTGGATGGGTTGGATCGGCCCGCACAAAGGTAACACAAAATAT  181
V  87.7% (257/293)  IGHV1-18*04  91   .G............C.......................A.....T...........A......A..G.TT....T...........C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  H  L  D  V  R  N  L  R  S  D  D 
                    Query_13440  182  GCACAGAGTTTCCAGGGCAGAGTCACGATGACCACAGACACATTGACGGGCACAGCTCACCTGGACGTGAGGAACCTGCGATCTGACGAC  271
V  87.7% (257/293)  IGHV1-18*04  181  .......AGC................C................CC...A.......CT..A....GC......G....A...........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  V  Y  Y  C  S  R  A  G  Y  S  S  D  G  R  E  Y  M  T  P  L  F  D  F  W  G  Q  G  T 
                    Query_13440  272  ACGGCCGTCTATTACTGTTCGAGGGCCGGATATTCATCTGATGGGCGTGAATATATGACCCCGTTGTTTGACTTTTGGGGCCAGGGAACC  361
V  87.7% (257/293)  IGHV1-18*04  271  ........G.........G....-------------------------------------------------------------------  293
                                       T  A  V  Y  Y  C  A                                                                      
D  100.0% (7/7)     IGHD2-15*01  2    ---------------------------.......--------------------------------------------------------  8
J  90.7% (39/43)    IGHJ4*02     6    ------------------------------------------------------------------.......AC...............  29

                                                         
                                       P  V  S  V  S  S  
                    Query_13440  362  CCGGTCTCCGTCTCCTCAG  380
J  90.7% (39/43)    IGHJ4*02     30   .T....A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39447000


Query= Query_182698

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           341     5e-96
IGHD5-18*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGA	GATACAGCTATGGTT	CCCAC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATGGAGATACAGCTATGGTTCCCACCTTTGACTGC	ARDGDTAMVPTFDC	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	24	0	0	100
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	125	24	24	0	0	100
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	232	225	7	0	97


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  I  S  H  I  
                    Query_13441  16   GTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGATCTCACATATTA  105
V  97.0% (225/232)  IGHV3-74*01  65   .............................................................................G......G.....  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      N  S  D  G  S  S  T  N  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  A  K  N  T  L  Y  L  
                    Query_13441  106  ATAGTGATGGGAGTAGCACAAACTACGCGGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAGACAACGCCAAGAACACACTGTATCTGC  195
V  97.0% (225/232)  IGHV3-74*01  155  .....................G.............................C...........................G..........  244
                                      N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      Q  V  N  N  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  D  T  A  M  V  P  T  F  D  C  W  
                    Query_13441  196  AAGTGAACAATCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCAAGAGATGGAGATACAGCTATGGTTCCCACCTTTGACTGCTGGG  285
V  97.0% (225/232)  IGHV3-74*01  245  ..A......G..........................................--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (15/15)   IGHD5-18*01  4    --------------------------------------------------------...............-------------------  18
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------------------------------------------........A.....  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_13441  286  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  97.7% (43/44)    IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_268527

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           321     7e-90
IGHD3-3*01                                                                                            23.8    0.011
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGTCTTTAATG	ACGATTATTGGAGTG	ATGATTTTCGTCGACACCTAGGGC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTCTTTAATGACGATTATTGGAGTGATGATTTTCGTCGACACCTAGGGCTTGACAAC	ARHVFNDDYWSDDFRRHLGLDN	244	309	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	228	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  V  T  A  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_13442  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCTGTCACTGCCAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  90.8% (228/251)  IGHV4-39*01  49   ...............................G...CA...GCAGT............................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  H  T  S 
                    Query_13442  91   CTGGAGTGGATTGGAAATATCTATTATAGTGGGACCACCTACTACAACCCCTCCCTCAAGAGTCGAGTCACCATCTCCGTGCACACGTCC  180
V  90.8% (228/251)  IGHV4-39*01  139  ..............G.G.................G...............G.......................A.....AG........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       K  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  H  V  F  N  D  D  Y 
                    Query_13442  181  AAGAATCAGTTTTCCCTGAGGCTGAATTCTGTGACCGCCGCAGACTCGGCTGTATATTACTGTGCGAGACATGTCTTTAATGACGATTAT  270
V  90.8% (228/251)  IGHV4-39*01  229  .....C.....C.......A.....GC..................A.......G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  93.3% (14/15)    IGHD3-3*01   6    ----------------------------------------------------------------------------------......T.  13

                                      --CDR3-IMGT--------------------------->                                  
                                       W  S  D  D  F  R  R  H  L  G  L  D  N  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_13442  271  TGGAGTGATGATTTTCGTCGACACCTAGGGCTTGACAACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  343
D  93.3% (14/15)    IGHD3-3*01   14   .......------------------------------------------------------------------  20
J  95.2% (40/42)    IGHJ4*02     7    -------------------------------.....T........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_182693

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD3-3*01                                                                                            18.0    0.59 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGCCTCGTGCCTG	GGAGTGGTT	TTGAGGCTATTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGCCTCGTGCCTGGGAGTGGTTTTGAGGCTATTCCTGACTAC	AKSLVPGSGFEAIPDY	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	226	22	0	91.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  I  Y  G  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_13443  1    GGTCCCTGAGACTCTCCTGTGTTGCCTCTGGATTCACCTTCAGTATTTATGGCATGGGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.1% (226/248)  IGHV3-23*01  47   .....................CA.................T..C.GC....C....A.C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  G  S  G  D  R  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_13443  91   AGTGGGTCGCAAGTATTAGTGGTAGTGGTGATAGAACATACTACGCAGACTCCGTGAGGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  91.1% (226/248)  IGHV3-23*01  137  ........T..GC.................G...C......................A...........................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  H  L  Q  M  I  S  L  R  D  E  D  T  A  V  Y  Y  C  A  K  S  L  V  P  G  S  G  
                    Query_13443  181  AGAACACACTGCATCTGCAAATGATCAGCCTCAGAGACGAGGACACGGCCGTCTATTACTGTGCGAAAAGCCTCGTGCCTGGGAGTGGTT  270
V  91.1% (226/248)  IGHV3-23*01  227  .......G...T............A......G....C...............A...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD3-3*01   15   ---------------------------------------------------------------------------------.........  23

                                      T------------------>                                  
                                      F  E  A  I  P  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13443  271  TTGAGGCTATTCCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (41/41)   IGHJ4*02     8    -------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_52968

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*03                                                                                           335     4e-94
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*03	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	AATGCCA	TTCGGGG	G	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGAAATGCCATTCGGGGGTGCCTTTGATATA	VKEMPFGGAFDI	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  I  F  S  S  Y  S  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13444  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCATCTTCAGTAGCTATTCTATACATTGGGTCCGCCAGGCTCCAGGGAAGGGACTGA  90
V  92.8% (232/250)  IGHV3-64*03  47   ....................................C.............G....G..C..............................G  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      K  H  V  S  V  I  S  S  D  G  D  S  T  Y  Y  A  D  S  V  Q  G  R  F  T  L  S  R  D  N  S  
                    Query_13444  91   AACATGTATCAGTTATTAGTAGTGATGGGGATAGCACATATTACGCAGACTCAGTGCAGGGCAGATTCACCTTGTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-64*03  137  ..T....T....C..........A......G.........C...............A..............A.C................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  K  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  E  M  P  F  G  G  A  
                    Query_13444  181  AGAACAAGCTGTATCTCCAAATGAGCAGTCTGAGACCTGAGGACACGGCTGTTTATTACTGTGTGAAAGAAATGCCATTCGGGGGTGCCT  270
V  92.8% (232/250)  IGHV3-64*03  227  ......C.......G....................G................G.................--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (7/7)     IGHD3-10*01  13   -----------------------------------------------------------------------------.......------  19
J  93.6% (44/47)    IGHJ3*02     4    -------------------------------------------------------------------------------------...T.  8

                                      ------->                                  
                                      F  D  I  W  G  Q  G  T  T  V  T  V  S  S  
                    Query_13444  271  TTGATATATGGGGCCAAGGGACAACGGTCACCGTCTCTTCAG  312
J  93.6% (44/47)    IGHJ3*02     9    .......C................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_182691

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           283     1e-78
IGHD3-9*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GTGACCCA	TACGGTATTTTG	GCTATTGAGAAG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGTGACCCATACGGTATTTTGGCTATTGAGAAG	ATGDPYGILAIEK	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	27	3	0	90
FR2-IMGT	60	110	51	42	9	0	82.4
CDR2-IMGT	111	131	21	18	3	0	85.7
FR3-IMGT	132	245	114	100	14	0	87.7
CDR3-IMGT (germline)	246	252	7	6	1	0	85.7
Total	N/A	N/A	249	215	34	0	86.3


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  A  N  Y  W  S  W  I  R  Q  S  P  A  K  G  
                    Query_13445  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTGGTGCCAACTACTGGAGTTGGATCCGCCAATCCCCTGCAAAGGGCC  93
V  86.3% (215/249)  IGHV4-31*02  50   .....TCC...A....................................GTT..........C...........GCA...A.GG.......  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  G  G  T  T  E  Y  N  P  S  L  K  S  R  L  T  M  S  I  D  P  S  
                    Query_13445  94   TCGAGTGGATTGGATACATCTATTATGGTGGGACCACCGAGTACAACCCGTCGCTCAAGAGTCGACTCACCATGTCCATTGACCCGTCTA  183
V  86.3% (215/249)  IGHV4-31*02  140  .G...........G...........CA......G....T.C...........C............G.T.....A..AG.A...A......  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      T  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  G  D  P  Y  G  I  L  
                    Query_13445  184  CGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGACAGGTGACCCATACGGTATTTTGG  273
V  86.3% (215/249)  IGHV4-31*02  230  A...................C...G...........................G.............G..---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD3-9*01   5    -----------------------------------------------------------------------------....A.......-  16

                                      ---------->                                
                                      A  I  E  K  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13445  274  CTATTGAGAAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  316
J  100.0% (32/32)   IGHJ4*02     15   -----------................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_51203

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           232     4e-63
IGHD3-10*01                                                                                           10.3    120  
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCAC	GGTTC	C	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCACGGTTCCTGATGCTTTTGATGTC	ARGTVPDAFDV	253	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	22	24	3	3	0	0	100
CDR1-IMGT	25	48	24	16	8	0	66.7
FR2-IMGT	49	99	51	45	6	0	88.2
CDR2-IMGT	100	138	39	18	6	15	46.2
FR3-IMGT	139	252	114	106	8	0	93
CDR3-IMGT (germline)	253	259	7	7	0	0	100
Total	N/A	N/A	238	195	28	15	81.9


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-----------
                                       S  G  F  D  V  N  E  Y  T  M  N  W  V  R  Q  T  P  E  K  G  M  E  W  V  S  S  M  S  S  S 
                    Query_13446  22   TCTGGATTCGACGTCAATGAATATACCATGAACTGGGTGCGTCAGACTCCAGAGAAGGGCATGGAGTGGGTCTCATCCATGAGTAGCTCA  111
V  81.9% (195/238)  IGHV3-21*01  73   .........AC.T...G.AGC....G............C..C...G......G......GC...................T.....T---  159
                                       S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S    

                                      ---CDR2-IMGT--------------><----------------------------------------------------FR3-IMGT--
                                       S  K  R  I  S  T  G  S  R  Y  Y  P  D  S  A  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L 
                    Query_13446  112  TCCAAGCGTATCAGTACTGGTTCCAGATACTACCCAGACTCAGCGAAGGGCCGCTTCACCATCTCCAGAGACAACGCCAAGAACTCACTA  201
V  81.9% (195/238)  IGHV3-21*01  160  ------------....G.A...A..T.......G.........T.........A...................................G  237
                                                   S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L 

                                      --------------------------------------------------><-----------CDR3-IMGT----------->      
                                       Y  L  Q  I  N  N  L  R  T  D  D  T  A  V  Y  Y  C  A  R  G  T  V  P  D  A  F  D  V  W  G 
                    Query_13446  202  TATCTGCAAATCAACAACCTGAGAACCGACGACACGGCTGTGTATTACTGTGCGAGAGGCACGGTTCCTGATGCTTTTGATGTCTGGGGC  291
V  81.9% (195/238)  IGHV3-21*01  238  ...........G....G.......G....G............................--------------------------------  295
                                       Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                  
D  100.0% (5/5)     IGHD3-10*01  11   --------------------------------------------------------------.....-----------------------  15
J  98.0% (48/49)    IGHJ3*01     1    --------------------------------------------------------------------......................  22

                                                                 
                                       Q  G  T  K  V  T  V  S  S 
                    Query_13446  292  CAAGGGACAAAGGTCACCGTCTCTTCA  318
J  98.0% (48/49)    IGHJ3*01     23   ..........T................  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_88396

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           311     4e-87
IGHD2-8*01                                                                                            12.2    31   
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	TAATGG	CCCGACTGA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGGCCCGACTGAACTACGGCATGGACGTC	ARLMARLNYGMDV	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  V  S  L  T  S  H  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E  
                    Query_13447  4    CCCTGAGACTCTCCTGCTCTGTCTCTGGTGTCTCCCTCACCAGTCACTACTGGAGCTGGGTCCGGCAGCCCCCCGGGAAGGGACTGGAAT  93
V  90.9% (221/243)  IGHV4-59*08  50   .....TCC...A.....A............G....A...GT...T..............A.............A..............G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  E  Y  I  Y  Y  R  G  R  P  N  N  N  P  S  L  R  S  R  V  T  I  S  V  D  A  S  K  N  
                    Query_13447  94   GGATTGAGTATATCTATTACAGAGGGCGTCCCAACAACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACGCGTCCAAGAACC  183
V  90.9% (221/243)  IGHV4-59*08  140  ......G...............T...A.CA.....T...............A.........................A............  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  A  R  L  N  Y  G  M  
                    Query_13447  184  AGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACTAATGGCCCGACTGAACTACGGCATGG  273
V  90.9% (221/243)  IGHV4-59*08  230  ..................G............................................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD2-8*01   13   ---------------------------------------------------------------......---------------------  18
J  94.0% (47/50)    IGHJ6*02     13   ------------------------------------------------------------------------------.......T....  24

                                      ---->                                 
                                      D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_13447  274  ACGTCTGGGGCCGAGGGACCACGGTCACCGTCTCGTCA  311
J  94.0% (47/50)    IGHJ6*02     25   ............A.....................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_88397

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            329     3e-92
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ3*02                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	GTCAGCGTACTGG	TATTGTTCGGG	CCGCCCCCTACGCTGGTCC	TGAGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAGTCAGCGTACTGGTATTGTTCGGGCCGCCCCCTACGCTGGTCCTGAGATT	AKDSQRTGIVRAAPYAGPEI	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	252	10	9	1	0	90
Total	N/A	N/A	252	231	21	0	91.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  F  T  F  K  L  Y  A  M  H  W  V  R  L  A  P  G  K  G  L  
                    Query_13448  1    GGTCCCTGAGACTCTCCTGTGAAGGCTCTGGATTCACCTTTAAACTGTATGCCATGCACTGGGTCCGGCTAGCTCCAGGGAAGGGCCTGG  90
V  91.7% (231/252)  IGHV3-9*01   47   .....................C..C................G.TGAT......................A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  W  N  S  A  S  M  G  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_13448  91   AGTGGGTCTCAAGTATTAGTTGGAATAGTGCTAGCATGGGCTATGCGGACTCTGTGAAGGGCCGATTCACCGTTTCCAGAGACAACGCCA  180
V  91.7% (231/252)  IGHV3-9*01   137  ...........G..................G......A.................................A.C................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  V  E  D  T  A  F  Y  Y  C  A  K  D  S  Q  R  T  G  I  
                    Query_13448  181  AGAACTCCGTGTATTTACAAATGAACAGTCTCAGAGTTGAGGACACGGCCTTCTACTACTGTGCGAAAGATAGTCAGCGTACTGGTATTG  270
V  91.7% (231/252)  IGHV3-9*01   227  ........C.....C.G..............G....C...............G..T........A.......------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  90.9% (10/11)    IGHD3-10*01  8    -------------------------------------------------------------------------------------...G.  12

                                      R3-IMGT------------------------>                                  
                                      V  R  A  A  P  Y  A  G  P  E  I  W  G  Q  G  T  M  V  S  V  T  S  
                    Query_13448  271  TTCGGGCCGCCCCCTACGCTGGTCCTGAGATTTGGGGCCAAGGGACAATGGTCAGCGTCACTTCAG  336
D  90.9% (10/11)    IGHD3-10*01  13   ......------------------------------------------------------------  18
J  90.2% (37/41)    IGHJ3*02     10   -------------------------...T..C......................C....T......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_88394

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           344     7e-97
IGHD3-9*01                                                                                            44.9    5e-09
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCTGT	GGTGGCA	ATTACGATATTTTGGCTGGTTATTAT	TCTGGGGGCC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGTGGCAATTACGATATTTTGGCTGGTTATTATTCTGGGGGCCACTTCTATGGTGTGAACGTC	GGNYDILAGYYSGGHFYGVNV	249	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	107	7	0	93.9
Total	N/A	N/A	248	234	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  G  S  G  F  T  F  G  E  Y  A  L  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_13449  1    GGTCCCTGAGACTCTCCTGTACAGGTTCTGGATTCACCTTTGGGGAATATGCTTTGACCTGGGTCCGCCAGGCTCCTGGGAAGGGGCTGG  90
V  94.4% (234/248)  IGHV3-49*04  47   ........................C..................T..T......A...G..................A.............  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  V  Y  G  G  T  T  E  Y  A  A  S  V  N  G  R  F  T  I  S  R  D  
                    Query_13449  91   AGTGGGTAGGTTTCATTAGAAGCAAAGTTTATGGTGGGACAACAGAATACGCCGCGTCTGTGAATGGCAGATTCACCATCTCACGAGATG  180
V  94.4% (234/248)  IGHV3-49*04  137  ...........................C....................................A..................A......  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  E  S  I  A  Y  L  Q  M  N  S  L  T  I  E  D  T  G  V  Y  F  C  G  G  N  Y  D  I  L  
                    Query_13449  181  ATTCCGAAAGCATCGCCTATCTGCAAATGAACAGCCTGACAATCGAGGACACAGGCGTGTATTTCTGTGGTGGCAATTACGATATTTTGG  270
V  94.4% (234/248)  IGHV3-49*04  227  .....A.................................A..C...........C........A....----------------------  294
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C                       
D  96.2% (25/26)    IGHD3-9*01   3    ---------------------------------------------------------------------------..............A  17

                                      -----CDR3-IMGT-------------------------->                              
                                      A  G  Y  Y  S  G  G  H  F  Y  G  V  N  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_13449  271  CTGGTTATTATTCTGGGGGCCACTTCTATGGTGTGAACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  341
D  96.2% (25/26)    IGHD3-9*01   18   ...........------------------------------------------------------------  28
J  92.0% (46/50)    IGHJ6*02     10   ---------------------...A...C...A..G...................................  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_88395

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           304     1e-84
IGHD4-17*01                                                                                           14.1    8.5  
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGAATAC	AG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGAATACAGCAACTGGGTCGACCCC	ARDSGEYSNWVDP	252	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	137	27	19	2	6	70.4
FR3-IMGT	138	251	114	104	10	0	91.2
CDR3-IMGT (germline)	252	259	8	8	0	0	100
Total	N/A	N/A	256	227	23	6	88.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  D  S  V  S  S  G  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  
                    Query_13450  4    CCCTGAGACTCTCCTGCAGTGTCTCTGGTGACTCCGTCAGCAGTGGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGGC  93
V  88.7% (227/256)  IGHV4-61*01  50   .....TCC...A......C...........G.............................G...........................A.  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><--------CDR2-IMGT--------><---------------------------------------------
                                      L  E  W  I  G  H  I  Y  N  Y  N  R  G  S  T  N  Y  N  P  S  L  Q  S  R  V  A  I  S  V  D  
                    Query_13450  94   TGGAGTGGATCGGTCATATCTATAACTATAACAGAGGGAGCACCAATTATAATCCCTCCCTCCAAAGTCGAGTCGCCATATCAGTAGACA  183
V  88.7% (227/256)  IGHV4-61*01  140  ..........T..GT........T..------..T...........C..C..C.........A.G.........A...............  223
                                      L  E  W  I  G  Y  I  Y  Y        S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  G  E  Y  
                    Query_13450  184  CATCCAAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATTCCGGTGAATACA  273
V  88.7% (227/256)  IGHV4-61*01  224  .G........................C...G...........................G.................--------------  299
                                      T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                 
D  90.0% (9/10)     IGHD4-17*01  7    -------------------------------------------------------------------------------......C...-  16

                                      GT-------------->                                  
                                      S  N  W  V  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13450  274  GCAACTGGGTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  98.0% (49/50)    IGHJ5*02     2    -.......T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_88392

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           291     5e-81
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	213	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13451  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  88.8% (213/240)  IGHV4-59*01  49   ..................A......................T.GT.A...C....G.............C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R 
                    Query_13451  91   TGGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGA  180
V  88.8% (213/240)  IGHV4-59*01  139  .......GG.....C.ATT................C..C...........C.....................G.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G 
                    Query_13451  181  CACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGT  270
V  88.8% (213/240)  IGHV4-59*01  229  ..G...........G....G............T..............G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-22*01  7    -----------------------------------------------------------------------------..........A..  19

                                      ----------------------->                                  
                                       G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13451  271  GGCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  328
D  93.3% (14/15)    IGHD3-22*01  20   ..--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    --------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_88393

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           321     7e-90
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAG	GGGGATC	GTATTACTATGATAGT	CTTGAAGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGGGGGATCGTATTACTATGATAGTCTTGAAGGTTTTGATGTC	TRGGSYYYDSLEGFDV	249	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	134	30	23	7	0	76.7
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	230	25	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  T  S  G  F  T  F  R  D  F  A  L  S  W  V  R  Q  A  P  G  R  G  L  
                    Query_13452  1    GGTCCCTGAGACTCTCCTGTACAACCTCTGGATTCACATTTCGAGATTTTGCTCTGAGCTGGGTCCGCCAGGCTCCAGGGAGGGGCCTGG  90
V  90.2% (230/255)  IGHV3-49*04  47   .......................G.T...........C...G.T....A....A...........................A...G....  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  A  S  M  R  S  N  N  Y  G  G  V  T  Q  Y  A  A  S  V  K  G  R  S  T  I  S  R  D  
                    Query_13452  91   AGTGGGTTGCTTCCATGAGAAGCAATAATTATGGTGGGGTGACACAATACGCCGCGTCTGTGAAAGGCAGATCCACCATCTCAAGAGATG  180
V  90.2% (230/255)  IGHV3-49*04  137  .......A.G..T...T........AGC..........ACA...G...........................T.................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------------------CD
                                      D  S  K  S  I  A  Y  L  Q  V  N  S  L  I  T  E  D  T  A  M  Y  Y  C  T  R  G  G  S  Y  Y  
                    Query_13452  181  ATTCCAAAAGCATCGCCTATCTGCAAGTGAACAGTCTGATAACCGAGGACACAGCCATGTATTACTGTACTAGAGGGGGATCGTATTACT  270
V  90.2% (230/255)  IGHV3-49*04  227  ..........................A.......C....A................G..................---------------  301
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (16/16)   IGHD3-22*01  1    ----------------------------------------------------------------------------------........  8

                                      R3-IMGT------------------>                                  
                                      Y  D  S  L  E  G  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13452  271  ATGATAGTCTTGAAGGTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  330
D  100.0% (16/16)   IGHD3-22*01  9    ........----------------------------------------------------  16
J  100.0% (44/44)   IGHJ3*01     7    ----------------............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_88390

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	269	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_13453  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTCAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  94.1% (269/286)  IGHV5-51*01  6    ................................................G.................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  P  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_13453  91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCCGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  94.1% (269/286)  IGHV5-51*01  96   ......................A.......G.......T.....G..........................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  T  S  V  N  T  A  Y  L  Q  W  S  T  L  G  A  S  D  T  A
                    Query_13453  181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACACGTCCGTCAACACCGCCTACCTGCAGTGGAGCACCCTGGGGGCCTCCGACACCGC  270
V  94.1% (269/286)  IGHV5-51*01  186  ....................C..............A....A...G.......................G....AA......G........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13453  271  CATATATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  94.1% (269/286)  IGHV5-51*01  276  ...G............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_88391

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHD1-26*01                                                                                           18.0    0.56  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	AGCA	AGTGGGAGC	CTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAAGCAAGTGGGAGCCTTATGACTCC	ARSKWEPYDS	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13454  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGTACCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.4% (239/248)  IGHV3-74*01  47   ....................................C........G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  K  S  D  G  S  S  G  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13454  91   TGTGGGTCTCACGTATTAAAAGTGATGGGAGTAGCGGAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (239/248)  IGHV3-74*01  137  ...................T...............AC..G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  H  M  N  N  L  R  A  E  D  T  A  L  Y  Y  C  A  R  S  K  W  E  P  Y  D  
                    Query_13454  181  AGAACACGCTGTATCTGCACATGAACAATCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCAAGAAGCAAGTGGGAGCCTTATGACT  270
V  96.4% (239/248)  IGHV3-74*01  227  ...................A.......G......................G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD1-26*01  6    ------------------------------------------------------------------------.........---------  14
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13454  271  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_254206

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           329     3e-92
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGGAGGGGGCTACGGGAATGTACTATAACGGACGG	CGGGGAGT	C	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGGAGGGGGCTACGGGAATGTACTATAACGGACGGCGGGGAGTCATGGACGTC	ARLEGATGMYYNGRRGVMDV	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	226	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  P  F  S  G  H  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13455  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGCCCTTCAGTGGTCACTACTGGAACTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  93.4% (226/242)  IGHV4-34*01  49   .........................A.......T...........T.........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  R  G  G  S  T  T  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_13455  91   TGGATTGGGGAAATCAATCGTGGTGGAAGCACCACCTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCTGTAGACACGTCCAAGAAC  180
V  93.4% (226/242)  IGHV4-34*01  139  ...................A.A............A.................................A..A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  L  E  G  A  T  G  M  Y  Y 
                    Query_13455  181  CAATTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCTGTTTTCTACTGTGCGAGGCTGGAGGGGGCTACGGGAATGTACTAT  270
V  93.4% (226/242)  IGHV4-34*01  229  ..G...........G....G...........................G.AT...........----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               

                                      GT------------------------>                                 
                                       N  G  R  R  G  V  M  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_13455  271  AACGGACGGCGGGGAGTCATGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  330
D  100.0% (8/8)     IGHD3-10*01  15   ---------........-------------------------------------------  22
J  97.6% (41/42)    IGHJ6*02     21   ------------------........................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_254207

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-16*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCT	TTACGTTTGGGGGAGCTATG	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTTTACGTTTGGGGGAGCTATGGACTACTTTGACTAC	ARGLFTFGGAMDYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  A  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_13456  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCGCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ...............................G.T..........................................A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  S  T  Y  S  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13456  91   CTGGAGTGGATTGGGTACATCTATTACCGTGGGAGCACGTACTCCAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ...........................A..........C....A..............................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  L  S  V  K  L  S  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  G  L  F  T  F  G  G 
                    Query_13456  181  AAGAACCAGTTGTCCGTGAAGCTGAGCTCTGTGGCTGCCGCGGACACGGCCGTGTATTATTGTGCGAGAGGCCTCTTTACGTTTGGGGGA  270
V  96.0% (240/250)  IGHV4-31*03  229  ...........C...C.................A.........................C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-16*01  10   ----------------------------------------------------------------------------..............  23

                                      GT------------------>                                  
                                       A  M  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13456  271  GCTATGGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  95.0% (19/20)    IGHD3-16*01  24   .T....-------------------------------------------------  29
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_202829

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            290     2e-80
IGHD1-26*01                                                                                           10.3    116  
IGHJ6*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACTTTCGCTTCGC	ACTAC	CTACATT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACTTTCGCTTCGCACTACCTACATTTGGACGTC	ARTFASHYLHLDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	27	20	4	3	74.1
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	245	217	25	3	88.6


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T     N  Q  W  W  T  W  V  R  Q  P  P  G  R  G  L 
                    Query_13457  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAC---TAATCAGTGGTGGACTTGGGTCCGCCAGCCCCCAGGGAGGGGGCTG  87
V  88.6% (217/245)  IGHV4-4*01   49   ........................................GCAG..G.A.C.......G.......................A.......  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  F  P  N  G  N  T  N  Y  S  P  S  L  K  S  R  L  T  I  S  M  A  K  S  K 
                    Query_13457  88   GAGTGGATTGGGGAAATTTTTCCTAATGGAAACACCAACTACAGCCCGTCCCTCAAGAGTCGACTCACCATTTCAATGGCTAAGTCCAAG  177
V  88.6% (217/245)  IGHV4-4*01   139  .................C.A..A..G...G.G...........A...................G.......A...G.A.AC.........  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  V  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  T  F  A  S  H  Y  L  H 
                    Query_13457  178  AACCAGGTCTCCCTGAAACTTAACTCTGTGACGGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGACTTTCGCTTCGCACTACCTACAT  267
V  88.6% (217/245)  IGHV4-4*01   229  ......T..........G..G.G.........C......................G.........-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                            
D  100.0% (5/5)     IGHD1-26*01  16   -------------------------------------------------------------------------------.....------  20

                                      -------->                              
                                       L  D  V  W  G  Q  G  A  T  V  S  V  S 
                    Query_13457  268  TTGGACGTCTGGGGCCAAGGGGCCACGGTCAGCGTCTCC  306
J  94.7% (36/38)    IGHJ6*02     22   -....................A.........C.......  59


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_37091

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           325     3e-91
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGGGAA	AACGAC	TGGGATCGTAGGTGGTCCGGT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGGGAAAACGACTGGGATCGTAGGTGGTCCGGTTTTCACTTC	ASRENDWDRRWSGFHF	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  V  S  S  G  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_13458  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCGTCAGCAGTGGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.9% (228/248)  IGHV4-61*01  49   ...................C...........G.............................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  L  I  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S 
                    Query_13458  91   CTGGAGTTGATTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGTCGACTCACCATCTCAGTAGACACGTCG  180
V  91.9% (228/248)  IGHV4-61*01  139  .......G......G...A........A........A.....................A.......G.......A..............C  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       R  N  Q  F  S  L  S  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  N  D  W  D  R 
                    Query_13458  181  AGGAACCAGTTCTCCCTGAGCGTGAACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCGAGCCGGGAAAACGACTGGGATCGT  270
V  91.9% (228/248)  IGHV4-61*01  229  .A.................AGC...G.........C..T..G..........................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (6/6)     IGHD1-1*01   12   ---------------------------------------------------------------------------......---------  17

                                      GT------------------>                                  
                                       R  W  S  G  F  H  F  W  G  P  G  T  L  V  T  V  S  S  
                    Query_13458  271  AGGTGGTCCGGTTTTCACTTCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  325
J  93.0% (40/43)    IGHJ4*02     6    ------------...G...A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_207923

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           322     2e-90
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CAAT	TTGTATTGCTGGTAACTGCTAC	GGGCGGGGCCCACAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCAATTTGTATTGCTGGTAACTGCTACGGGCGGGGCCCACATTTTGACCAG	ARAICIAGNCYGRGPHFDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	102	12	0	89.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  I  S  G  V  S  V  Y  N  D  G  S  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_13459  1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGTCTCCGTCTACAATGATGGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  91.2% (228/250)  IGHV4-61*08  49   .....................G.........G.......AG..G..G.....A.....................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  H  S  G  S  T  K  Y  N  P  S  L  N  S  R  G  T  I  S  L  D  T  S 
                    Query_13459  91   CTAGAGTGGATTGGGTATATCCATCACAGTGGGAGCACCAAGTACAACCCCTCCCTCAACAGTCGAGGTACCATATCACTTGACACGTCC  180
V  91.2% (228/250)  IGHV4-61*08  139  ..G..................T..T................C.................G.......TC.........G.A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       R  N  Q  F  S  L  R  L  K  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  I  C  I  A  G  N 
                    Query_13459  181  AGGAACCAGTTCTCCCTGAGGCTGAAGTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGCAATTTGTATTGCTGGTAAC  270
V  91.2% (228/250)  IGHV4-61*08  229  .A.................A.....GC..........................G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  86.4% (19/22)    IGHD2-15*01  7    --------------------------------------------------------------------------.....G..G.....G.  22

                                      3-IMGT----------------------->                                  
                                       C  Y  G  R  G  P  H  F  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13459  271  TGCTACGGGCGGGGCCCACATTTTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  86.4% (19/22)    IGHD2-15*01  23   ......----------------------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02     6    ---------------------......T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_37090

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           302     3e-84
IGHD2-21*02                                                                                           10.3    118  
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TCATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTCATGTCCCGACTGAACTACGGCATGGCCGTC	ARLMSRLNYGMAV	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	218	25	0	89.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  V  F  I  T  T  Y  C  W  S  W  V  R  Q  P  P  G  K  G  L  E  
                    Query_13460  4    CCCTGAGACTCTCCTGCTCTGTCTCTGGTGTCTTCATTACTACTTACTGCTGGAGCTGGGTCCGACAGCCCCCAGGGAAGGGACTGGAAT  93
V  89.7% (218/243)  IGHV4-59*08  50   .....TCC...A.....A............G..C...C.G..G.....A..........A....G.......................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  E  Y  I  Y  Y  R  G  S  P  N  N  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N  
                    Query_13460  94   GGATTGAGTATATCTACTACAGAGGGAGTCCCAACAACAACCCCTCCCTCAAGAGCCGAGTCACGGTATCAGTAGACACGTCCAAGAACC  183
V  89.7% (218/243)  IGHV4-59*08  140  ......G.........T.....T.....CA.....T...................T........CA........................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M  
                    Query_13460  184  AGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTCATGTCCCGACTGAACTACGGCATGG  273
V  89.7% (218/243)  IGHV4-59*08  230  ..............C...............................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (5/5)     IGHD2-21*02  17   ------------------------------------------------------------------------.....-------------  21
J  92.0% (46/50)    IGHJ6*02     13   ------------------------------------------------------------------------------.......T....  24

                                      ---->                                 
                                      A  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_13460  274  CCGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCGTCA  311
J  92.0% (46/50)    IGHJ6*02     25   A...................A.............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_207922

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD7-27*01                                                                                           14.1    8.3   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGTCA	AACTGGG	AACTCAATAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGACGTCAAACTGGGAACTCAATATACAACTGGTTCGACCCC	SRRQTGNSIYNWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	238	5	0	97.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  R  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13461  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACCGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.9% (238/243)  IGHV4-59*01  49   ...................................................T...G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13461  91   TGGATTGGATATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  97.9% (238/243)  IGHV4-59*01  139  ........G.................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  R  R  Q  T  G  N  S  I  Y  N 
                    Query_13461  181  CAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTTCGAGACGTCAAACTGGGAACTCAATATACAAC  270
V  97.9% (238/243)  IGHV4-59*01  229  .............A...........................................G.....---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD7-27*01  3    --------------------------------------------------------------------.......---------------  9
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------------.....  5

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13461  271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (51/51)   IGHJ5*02     6    ..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_254202

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           322     2e-90
IGHD1-26*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTGC	ATAGTGGGAGCTACT	TGT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTGCATAGTGGGAGCTACTTGTACTTCTTTGACTAC	ARLHSGSYLYFFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  T  S  G  F  T  V  I  N  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13462  1    GGTCCCTGAGACTCTCCTGTTCGACCTCTGGATTCACCGTCATTAATAATTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.2% (225/244)  IGHV3-53*01  47   ....................G.AG.......G..........G..GC..C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  A  I  Y  T  N  G  R  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_13462  91   AGTGGGTCTCAGCCATTTATACCAATGGTCGCACATTCTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGA  180
V  92.2% (225/244)  IGHV3-53*01  137  ............TT.......G.GG....A......A........................A............................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  E  M  N  S  L  R  A  A  D  T  A  V  Y  Y  C  A  R  L  H  S  G  S  Y  L  Y  
                    Query_13462  181  ACACGCTGTATCTTGAAATGAACAGCCTGAGAGCCGCGGACACGGCCGTGTATTATTGTGCGAGGCTGCATAGTGGGAGCTACTTGTACT  270
V  92.2% (225/244)  IGHV3-53*01  227  ..............C.....................A..................C........--------------------------  290
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  100.0% (15/15)   IGHD1-26*01  4    ---------------------------------------------------------------------...............------  18
J  93.8% (45/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      F  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_13462  271  TCTTTGACTACTGGGGCCAGGGGGCCCTGGTCACCGTCTCCTCAG  315
J  93.8% (45/48)    IGHJ4*02     4    A.....................AA.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_254203

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           262     4e-72
IGHD2-15*01                                                                                           10.3    119  
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	ACATAATCCT	GCTGC	CAGAGGGGC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGACATAATCCTGCTGCCAGAGGGGCCAACTGGTTCGACCTC	ARGHNPAARGANWFDL	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	48	24	19	2	3	79.2
FR2-IMGT	49	99	51	45	6	0	88.2
CDR2-IMGT	100	120	21	18	3	0	85.7
FR3-IMGT	121	234	114	95	19	0	83.3
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	245	208	34	3	84.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  D  F  Y  G  G  S  F     D  S  Y  W  N  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_13463  1    ACCCTGTCCCTCACCTGCGATTTTTATGGTGGGTCCTT---TGATTCCTACTGGAATTGGATCCGCCAGACTCCAGGGAAGGGGCTGGAG  87
V  84.9% (208/245)  IGHV4-34*01  49   ...................C.G.C..............CAG..G..A........GC............C.C..................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  N  R  A  G  S  T  N  F  N  P  S  L  E  S  R  L  T  I  S  V  D  T  S  T  K 
                    Query_13463  88   TGGATTGCAGAAATCAATCGTGCTGGAAGCACCAACTTCAATCCGTCCCTCGAGAGTCGACTCACCATTTCAGTGGACACGTCCACGAAG  177
V  84.9% (208/245)  IGHV4-34*01  139  .......GG..........A.AG..............A...C.........A........G.......A.....A..........A...C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       R  F  S  L  R  L  N  S  L  N  A  A  D  T  G  V  Y  Y  C  A  R  G  H  N  P  A  A  R  G  A 
                    Query_13463  178  CGATTCTCCCTGAGGCTAAATTCTCTTAACGCCGCAGACACGGGTGTGTATTACTGTGCGCGAGGACATAATCCTGCTGCCAGAGGGGCC  267
V  84.9% (208/245)  IGHV4-34*01  229  .AG..........A...G.GC...G.G.C......G.......C................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (5/5)     IGHD2-15*01  21   ---------------------------------------------------------------------------.....----------  25
J  98.0% (49/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13463  268  AACTGGTTCGACCTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  98.0% (49/50)    IGHJ5*02     3    .............C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_59291

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           319     2e-89
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGGGATGGCTACAGACGCTC	GTATTACG	CAC	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGACGGGGATGGCTACAGACGCTCGTATTACGCACTGGACGTC	ARDGDGYRRSYYALDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	99	15	0	86.8
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  W  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_13464  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTTCTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGGCTGG  90
V  90.8% (227/250)  IGHV3-74*01  47   ................................................A.......................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  R  I  N  L  E  G  S  R  T  T  T  A  D  F  L  K  G  R  F  S  I  S  R  D  N  G  
                    Query_13464  91   AGTGGGTCTCACGCATTAATCTTGAAGGGAGTAGAACAACCACCGCGGACTTTTTGAAGGGGCGATTCTCCATCTCCAGAGACAACGGCA  180
V  90.8% (227/250)  IGHV3-74*01  137  T............T......AG...T........C....G.TA........CCG.......C......A..................C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  V  Y  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  A  R  D  G  D  G  Y  R  R  
                    Query_13464  181  AGAACACGGTTTATCTGCAAATGAACAGTCTGACAGCCGAGGACACGGCCGTTTATTATTGTGCAAGAGACGGGGATGGCTACAGACGCT  270
V  90.8% (227/250)  IGHV3-74*01  227  ........C.G......................G...............T..G.....C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      T------------------>                                 
                                      S  Y  Y  A  L  D  V  W  G  Q  G  T  M  V  T  V  S  S 
                    Query_13464  271  CGTATTACGCACTGGACGTCTGGGGCCAGGGGACCATGGTCACCGTCTCCTCA  323
D  100.0% (8/8)     IGHD3-3*01   1    -........--------------------------------------------  8
J  95.1% (39/41)    IGHJ6*02     22   ------------................A.......C................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_83011

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           319     2e-89
IGHD2-21*02                                                                                           10.3    117  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TAATGTCCC	GACTG	A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAATGTCCCGACTGAACTACGGCATGGACGTC	ARLMSRLNYGMDV	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	224	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  V  S  I  S  N  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_13465  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGTCTCCATCAGCAATTACTACTGGAGCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  91.8% (224/244)  IGHV4-59*08  49   ..................A............G.........T.G................A............................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  E  Y  I  Y  Y  R  G  S  P  N  N  D  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13465  91   TGGATTGAGTACATCTATTACAGGGGGAGTCCCAATAACGACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  91.8% (224/244)  IGHV4-59*08  139  .......G...T...........T.....CA....CT..A..................................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  M  S  R  L  N  Y  G  M 
                    Query_13465  181  CAGTTCTCCCTGAGGTTGACCTCTGTGACCGCCGCAGACACGGCCGTCTATTACTGTGCGAGACTAATGTCCCGACTGAACTACGGCATG  270
V  91.8% (224/244)  IGHV4-59*08  229  .............A.C...G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD2-21*02  17   -------------------------------------------------------------------------.....------------  21
J  96.0% (48/50)    IGHJ6*02     13   -------------------------------------------------------------------------------.......T...  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13465  271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  309
J  96.0% (48/50)    IGHJ6*02     24   ...................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_83012

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           297     7e-83
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGTGTACGGAAATCAG	TATGATGGTAGTGGTTA	CCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTGTACGGAAATCAGTATGATGGTAGTGGTTACCCTGACTCC	ARGVYGNQYDGSGYPDS	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	216	26	0	89.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  S  G  S  I  S  A  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E  
                    Query_13466  4    CCCTGAGACTCTCCTGCACTGTCTCTAGTGGCTCCATCAGTGCTTACTACTGGAGTTGGGTCCGGCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  89.3% (216/242)  IGHV4-59*08  50   .....TCC...A..............G..............AG............C...A......................A.......  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  N  L  Y  Y  R  G  S  T  R  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  K  
                    Query_13466  94   GGATTGGGAATCTGTATTACAGAGGTAGTACCAGATACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAGC  183
V  89.3% (216/242)  IGHV4-59*08  140  ........T..A.C........T..G..C....AC....................................G................C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      Q  F  S  L  E  V  R  S  V  T  A  A  D  T  A  G  Y  Y  C  A  R  G  V  Y  G  N  Q  Y  D  G  
                    Query_13466  184  AATTCTCCCTGGAGGTGCGCTCTGTCACCGCCGCAGACACGGCCGGGTATTACTGTGCGAGAGGGGTGTACGGAAATCAGTATGATGGTA  273
V  89.3% (216/242)  IGHV4-59*08  230  .G.........A..C..A.......G...................T................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  94.1% (16/17)    IGHD3-22*01  8    --------------------------------------------------------------------------------......A...  17

                                      ---------------->                                  
                                      S  G  Y  P  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13466  274  GTGGTTACCCTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  94.1% (16/17)    IGHD3-22*01  18   .......--------------------------------------------  24
J  97.6% (40/41)    IGHJ4*02     8    ----------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_59292

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           335     4e-94
IGHD3-10*02                                                                                           10.3    131  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	CAGGAGATGGCCTCA	ATGTT	N/A	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAGGAGATGGCCTCAATGTTCTTTGACCAC	VRQEMASMFFDH	281	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	16	8	0	66.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	166	21	17	4	0	81
FR3-IMGT	167	280	114	98	16	0	86
CDR3-IMGT (germline)	281	286	6	5	1	0	83.3
Total	N/A	N/A	286	250	36	0	87.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  T  A  S  G  L  K  V  S  I  N
                    Query_13467  1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCGGGGGGGTCTCTGAGACTCTCCTGTACAGCCTCTGGATTAAAAGTCAGTATAAA  90
V  87.4% (250/286)  IGHV3-53*01  6    ..........G.........................T........C...............G..........G..C.CC.......GC..  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        D  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  Y  S  D  G  R  T  H  Y  A  D  S
                    Query_13467  91   TGACATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCGCACTTATCTATAGCGATGGCAGAACACACTACGCAGACTC  180
V  87.4% (250/286)  IGHV3-53*01  96   CT.......C.......................................T..G....T.......G...T..C...T.............  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  I  T  L  S  R  D  T  S  K  N  T  L  Y  L  Q  M  N  S  L  R  V  D  D  T  A  L
                    Query_13467  181  CGTCAAGGGCCGAATCACCCTCTCCAGAGACACGTCCAAGAACACCTTATATCTTCAAATGAACAGCCTGCGAGTCGACGACACTGCCCT  270
V  87.4% (250/286)  IGHV3-53*01  186  ...G.........T.....A............AT...........GC.G.....................A...C...G.....G...G.  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><-------------CDR3-IMGT------------>                                  
                                        Y  Y  C  V  R  Q  E  M  A  S  M  F  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13467  271  ATATTATTGTGTGAGACAGGAGATGGCCTCAATGTTCTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  350
V  87.4% (250/286)  IGHV3-53*01  276  G.....C....C....----------------------------------------------------------------  291
                                        Y  Y  C  A  R                                                                 
D  100.0% (5/5)     IGHD3-10*02  9    -------------------------------.....--------------------------------------------  13
J  97.7% (43/44)    IGHJ4*02     5    ------------------------------------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_83014

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           347     7e-98
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	C	GGGACTTATGC	CAACTCGCCA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGACTTATGCCAACTCGCCATACTGGTACTTCGATCTC	ASGTYANSPYWYFDL	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  S  S  S  Y  Y  W  G  W  I  R  H  P  P  G  K  G 
                    Query_13468  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCGGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCATCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*02  49   ...................C...........G.......A..................................G...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  T  G  S  A  Y  H  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_13468  91   CTGGAGTGGATTGCGAGTATCTATTATACTGGGAGCGCCTACCACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*02  139  .............G..............G.......A.....T...............................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       N  N  H  F  S  L  *  L  S  S  V  T  D  A  D  T  A  V  Y  Y  C  A  S  G  T  Y  A  N  S  P 
                    Query_13468  181  AACAACCACTTCTCCCTGTAGCTGAGCTCTGTGACCGACGCAGACACGGCTGTCTATTACTGTGCGAGCGGGACTTATGCCAACTCGCCA  270
V  94.8% (235/248)  IGHV4-39*02  229  ..G...............A..................C...............G..............----------------------  296
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.9% (10/11)    IGHD3-16*01  20   ---------------------------------------------------------------------....G......----------  30

                                      ----------------->                                  
                                       Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_13468  271  TACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  322
J  100.0% (52/52)   IGHJ2*01     2    ....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_59294

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           411     5e-117
IGHD3-16*02                                                                                           18.0    0.69  
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATGATAGTGGC	AGTTATCTTTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGCAGTTATCTTTATTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	289	345	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	71	3	0	95.9
CDR1-IMGT	76	99	24	22	2	0	91.7
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	106	8	0	93
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	279	16	0	94.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  
                    Query_13469  2    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTACCA  91
V  94.6% (279/295)  IGHV5-51*01  2    ....G.....G..........................................................G...........G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  D  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  
                    Query_13469  92   ACTACTGGATCGATTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATGCCAGATACA  181
V  94.6% (279/295)  IGHV5-51*01  92   G...........GC..................................................................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  I  T  I  S  A  D  N  S  I  G  T  A  Y  L  Q  L  H  S  L  K  A  S  D  
                    Query_13469  182  GCCCGTCCTTCGAAGGCCAAATCACCATCTCAGCCGACAACTCCATCGGCACCGCCTACCTGCAGTTGCACAGCCTGAAGGCCTCGGACA  271
V  94.6% (279/295)  IGHV5-51*01  182  ...........C.......GG...................G......A..................G.AG....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  M  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  
                    Query_13469  272  CCGCCATGTATTACTGTGCGAGACATGGGGATGATAGTGGCAGTTATCTTTATTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  361
V  94.6% (279/295)  IGHV5-51*01  272  .........................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  91.7% (11/12)    IGHD3-16*02  23   -----------------------------------------.......G....-------------------------------------  34
J  98.1% (53/54)    IGHJ6*02     9    -----------------------------------------------------....A................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_13469  362  CGGTCACCGTCTCCTCA  378
J  98.1% (53/54)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_59296

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           291     5e-81
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	213	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13470  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  88.8% (213/240)  IGHV4-59*01  49   ..................A......................T.GT.A...C....G.............C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R 
                    Query_13470  91   TGGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGA  180
V  88.8% (213/240)  IGHV4-59*01  139  .......GG.....C.ATT................C..C...........C.....................G.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G 
                    Query_13470  181  CACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGT  270
V  88.8% (213/240)  IGHV4-59*01  229  ..G...........G....G............T..............G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-22*01  7    -----------------------------------------------------------------------------..........A..  19

                                      ----------------------->                                  
                                       G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13470  271  GGCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  328
D  93.3% (14/15)    IGHD3-22*01  20   ..--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    --------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_59299

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13471  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_13471  91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  92.8% (232/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  P  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_13471  181  AGAAGTCAGTGTTTCCGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  92.8% (232/250)  IGHV3-21*01  227  ....C...C...A..T........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13471  271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_59298

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAGTTAT	CAGGGT	TGGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGGCTCCACCCC	ARSGSGSYQGWLHP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	222	20	0	91.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  P  Y  Y  W  I  W  I  R  Q  P  T  G  K  G  L  E 
                    Query_13472  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGTCCTTACTACTGGATCTGGATCCGGCAGCCCACAGGGAAGGGACTGGAG  90
V  91.7% (222/242)  IGHV4-59*01  49   ..................A............G..........AG...........G................C.................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  H  I  F  Y  T  G  S  T  K  Y  K  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  K 
                    Query_13472  91   TGGCTTGGCCATATCTTTTACACTGGGAGCACCAAATACAAGCCCTCCCTCAAGAGTCGAGTCACCATTTCACTAGACACGTCCAGGAAG  180
V  91.7% (222/242)  IGHV4-59*01  139  ...A....GT......A.....G............C.....C..........................A...G............A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  S  Y  Q  G  W 
                    Query_13472  181  CAGTTCTCCCTGAAACTGCGTTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTCAGGTTCGGGGAGTTATCAGGGTTGG  270
V  91.7% (222/242)  IGHV4-59*01  229  ..............G...A.C.........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (15/15)   IGHD3-10*01  11   ------------------------------------------------------------------...............---------  25
J  87.0% (40/46)    IGHJ5*02     6    ---------------------------------------------------------------------------------------...  8

                                      -------->                                  
                                       L  H  P  W  G  L  G  R  L  V  I  V  S  S  
                    Query_13472  271  CTCCACCCCTGGGGCCTGGGAAGACTGGTCATCGTCTCCTCAG  313
J  87.0% (40/46)    IGHJ5*02     9    T..G............A.....CC.......C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_116751

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           417     6e-119
IGHD3-10*01                                                                                           14.1    9.5   
IGHJ3*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	A	GGGGAGT	GGGGCCCCCTTCTTAGAGGCC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAAGGGGAGTGGGGCCCCCTTCTTAGAGGCCCTTTTGATATC	AKEGEWGPLLRGPFDI	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  S  A  V  K  V  A  C  K  A  S  G  G  T  F  S  N  Y
                    Query_13473  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAGGAAGCCTGGGTCCGCGGTGAAAGTCGCCTGCAAGGCTTCTGGAGGCACCTTCAGCAACTA  90
V  95.9% (279/291)  IGHV1-69*01  6    ..................G..........A.............T.......G...T..............................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  F  F  G  T  A  N  Y  A  Q
                    Query_13473  91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCATCCCTTTCTTTGGTACAGCAAACTACGCACA  180
V  95.9% (279/291)  IGHV1-69*01  96   ....................................................G...........A.........................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  L  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  Y  T  A
                    Query_13473  181  GAGGTTGCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGTACACGGC  270
V  95.9% (279/291)  IGHV1-69*01  186  ..A...C...........................................................................G.......  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        V  Y  Y  C  A  K  E  G  E  W  G  P  L  L  R  G  P  F  D  I  W  G  Q  G  T  M  V  I  F  S
                    Query_13473  271  CGTGTATTACTGTGCGAAAGAAGGGGAGTGGGGCCCCCTTCTTAGAGGCCCTTTTGATATCTGGGGCCAAGGGACAATGGTCATCTTCTC  360
V  95.9% (279/291)  IGHV1-69*01  276  .................G...---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-10*01  16   ----------------------.......-------------------------------------------------------------  22
J  95.6% (43/45)    IGHJ3*02     6    --------------------------------------------------.................................C.G....  45

                                           
                                        S  
                    Query_13473  361  TTCAG  365
J  95.6% (43/45)    IGHJ3*02     46   .....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_97896

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           367     6e-104
IGHD1-26*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGA	GGTGTAGTGGGAGC	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGGTGTAGTGGGAGCCCCCTTTGACTAT	ARGGVVGAPFDY	291	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	67	4	0	94.4
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	18	6	0	75
FR3-IMGT	177	290	114	102	12	0	89.5
CDR3-IMGT (germline)	291	295	5	5	0	0	100
Total	N/A	N/A	289	262	27	0	90.7


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  Q  P  G  S  S  V  K  V  S  C  K  T  S  G  G  S  F  S  S  
                    Query_13474  7    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGCAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACCTCTGGAGGTAGTTTCAGCAGCT  96
V  90.7% (262/289)  IGHV1-69*01  5    ...................G............A................................G.T........C.CC..........  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  S  I  M  P  L  F  G  I  P  N  Y  A  
                    Query_13474  97   ATGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGTATCATGCCTCTGTTTGGCATACCAAATTACGCAG  186
V  90.7% (262/289)  IGHV1-69*01  95   .....................................................G.G.....C...A.C.....T.C.G....C......C  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      E  K  F  Q  G  R  V  T  I  T  A  D  A  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  G  D  T  
                    Query_13474  187  AGAAGTTCCAGGGCAGAGTCACGATAACCGCGGACGCATCAACGAGGACAGCCTACATGGAGTTGAGAAGCCTGAGATCTGGGGACACGG  276
V  90.7% (262/289)  IGHV1-69*01  185  .........................T..........A...C.....C...............C....C.............A........  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-------------CDR3-IMGT------------>                                  
                                      A  I  Y  Y  C  A  R  G  G  V  V  G  A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13474  277  CCATATATTATTGTGCGAGGGGAGGTGTAGTGGGAGCCCCCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  360
V  90.7% (262/289)  IGHV1-69*01  275  ..G.G.....C........-----------------------------------------------------------------  293
                                      A  V  Y  Y  C  A                                                                    
D  92.9% (13/14)    IGHD1-26*01  1    -----------------------...A..........-----------------------------------------------  14
J  97.7% (43/44)    IGHJ4*02     5    ----------------------------------------.........C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_116757

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*07                                                                                           310     1e-86
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*07	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	GGAGTCGTAATTAT	CATGGGAATTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGGAGTCGTAATTATCATGGGAATTTCTACTTCGACCAC	ARGSRNYHGNFYFDH	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	14	7	0	66.7
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	250	7	6	1	0	85.7
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  L  T  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_13475  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCCTCACCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  89.6% (224/250)  IGHV4-39*07  49   ...............................G....A...G.................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Q  H  S  G  A  T  Y  Y  N  P  S  L  E  S  R  V  S  L  S  V  D  R  S 
                    Query_13475  91   CTGGAGTGGATTGGCTACATCCAGCATTCTGGGGCCACCTACTACAACCCGTCCCTCGAGAGTCGGGTCTCCCTTTCAGTAGACCGGTCC  180
V  89.6% (224/250)  IGHV4-39*07  139  ..............GAGT...T.TT..AG....AG......................A.......A...A..A.A.........AC....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  S  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  S  R  N  Y  H  G 
                    Query_13475  181  AAGAGCCAGTTCTCCCTGAGGCTGAACTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGAGGGAGTCGTAATTATCATGGG  270
V  89.6% (224/250)  IGHV4-39*07  229  ....A..............A.....G...........................G...........G....--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  85.7% (12/14)    IGHD3-3*01   15   ----------------------------------------------------------------------.....G..T.....------  28

                                      ----------------->                                  
                                       N  F  Y  F  D  H  W  G  Q  G  I  L  V  S  V  S  S  
                    Query_13475  271  AATTTCTACTTCGACCACTGGGGCCAGGGAATCCTGGTCTCCGTCTCCTCAG  322
J  91.5% (43/47)    IGHJ4*02     2    -----......T...T...............C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_202827

Length=407
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*12                                                                                           408     4e-116
IGHD3-22*01                                                                                           27.6    9e-04 
IGHJ6*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*12	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCGGATC	ACTATGATAGTGGTGGT	C	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCGGATCACTATGATAGTGGTGGTCACTACTTCTATAATATGGACGTC	ARVPDHYDSGGHYFYNMDV	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	78	75	73	2	0	97.3
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	19	5	0	79.2
FR3-IMGT	178	291	114	111	3	0	97.4
CDR3-IMGT (germline)	292	298	7	7	0	0	100
Total	N/A	N/A	295	278	17	0	94.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  A  T 
                    Query_13476  4    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCGCCACC  93
V  94.2% (278/295)  IGHV1-69*12  1    ...........G...........G............................................................TT..G.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  L  L  I  L  M  F  D  T  P  N  Y 
                    Query_13476  94   AACTATGGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGACTGCTCATCCTTATGTTTGATACACCAAACTAC  183
V  94.2% (278/295)  IGHV1-69*12  91   .G.....C.................................................GG.A......C...C....G....G........  180
                                       S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  V  S  N  L  R  S  E  D 
                    Query_13476  184  GCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGGTGAGCAACCTGAGATCTGAGGAC  273
V  94.2% (278/295)  IGHV1-69*12  181  ..................................................................C......G................  270
                                       A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-----------------------CDR3-IMGT----------------------->               
                                       T  A  V  Y  Y  C  A  R  V  P  D  H  Y  D  S  G  G  H  Y  F  Y  N  M  D  V  W  G  Q  G  T 
                    Query_13476  274  ACGGCCGTTTATTACTGTGCGAGAGTTCCGGATCACTATGATAGTGGTGGTCACTACTTCTATAATATGGACGTCTGGGGCCAAGGGACC  363
V  94.2% (278/295)  IGHV1-69*12  271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.1% (16/17)    IGHD3-22*01  6    ----------------------------------...........A.....---------------------------------------  22
J  91.1% (51/56)    IGHJ6*02     7    ----------------------------------------------------......A...CGG.........................  44

                                                        
                                       T  V  T  V  S  S 
                    Query_13476  364  ACAGTCACCGTCTCCTCA  381
J  91.1% (51/56)    IGHJ6*02     45   ..G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39867768


Query= Query_116755

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           333     1e-93
IGHD6-19*01                                                                                           21.8    0.040
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCAGG	GCAGTGGCTGG	CACG	CGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTC	ARVPGQWLARGMDV	236	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	23	1	0	95.8
FR2-IMGT	50	100	51	50	1	0	98
CDR2-IMGT	101	121	21	18	3	0	85.7
FR3-IMGT	122	235	114	111	3	0	97.4
CDR3-IMGT (germline)	236	242	7	7	0	0	100
Total	N/A	N/A	229	221	8	0	96.5


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  V  S  S  S  Y  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  M 
                    Query_13477  14   TGTGCAGCCTCTGGGTTCACCGTCAGTAGCAGCTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCAGTTATG  103
V  96.5% (221/229)  IGHV3-53*01  64   ...............................A........G................................................T  153
                                       C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I 

                                      ---CDR2-IMGT-----><----------------------------------------------------FR3-IMGT-----------
                                       Y  S  G  G  T  T  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 
                    Query_13477  104  TATAGCGGTGGGACCACATACTACGCAGAGTCCGTGAAGGGCCGATTCACCATCTCAAGAGACAATTCCAAGAACACGCTGTATCTTCAA  193
V  96.5% (221/229)  IGHV3-53*01  154  ...........T.G...............C..........................C.................................  243
                                       Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q 

                                      -----------------------------------------><----------------CDR3-IMGT--------------->      
                                       M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  G  Q  W  L  A  R  G  M  D  V  W  G 
                    Query_13477  194  ATGGACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGTCCCAGGGCAGTGGCTGGCACGCGGTATGGACGTCTGGGGC  283
V  96.5% (221/229)  IGHV3-53*01  244  ...A.............................................-----------------------------------------  292
                                       M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                           
D  100.0% (11/11)   IGHD6-19*01  8    --------------------------------------------------------...........-----------------------  18
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------...................  35

                                                                 
                                       Q  G  T  T  V  P  V  S  S 
                    Query_13477  284  CAAGGGACCACGGTCCCCGTCTCCTCA  310
J  97.8% (45/46)    IGHJ6*02     36   ...............A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_116754

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           385     4e-109
IGHD2-2*01                                                                                            12.2    35    
IGHJ3*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAC	GGGGCCGA	TACCAG	T	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGGGGCCGATACCAGTCTTTTGATATT	ARRGRYQSFDI	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	6	1	0	85.7
Total	N/A	N/A	290	268	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  R  K  P  G  E  S  L  N  I  S  C  Q  G  F  G  Y  R  F  T  N  H
                    Query_13478  1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAGAAAGCCCGGGGAGTCTCTGAACATCTCCTGTCAGGGTTTTGGATACAGATTTACCAATCA  90
V  92.4% (268/290)  IGHV5-51*01  6    ....................C........A.....................G.........A......C.........C.......GCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  F  P  D  D  S  Y  T  R  Y  S  P
                    Query_13478  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAATCATCTTTCCTGATGACTCTTATACAAGATATAGCCC  180
V  92.4% (268/290)  IGHV5-51*01  96   ...................................................G.......A.....G.......G....C.....C.....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  N  L  K  A  S  D  T  A
                    Query_13478  181  GTCCTTCCAAGGCCAAGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAATGGAGCAACCTGAAGGCCTCGGACACCGC  270
V  92.4% (268/290)  IGHV5-51*01  186  ...............G........C...................................G.......G.....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        L  Y  Y  C  A  R  R  G  R  Y  Q  S  F  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_13478  271  CTTGTATTATTGTGCCAGACGGGGCCGATACCAGTCTTTTGATATTTGGGGTCAAGGGACAATGGTTATCGTCTCCTCAG  350
V  92.4% (268/290)  IGHV5-51*01  276  .A.......C.....G....------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                              
D  100.0% (6/6)     IGHD2-2*01   16   ----------------------------......----------------------------------------------  21
J  88.9% (40/45)    IGHJ3*02     6    -----------------------------------..........C.....C..............C.C......T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_338210

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV2-70D*04                                                                                          341     5e-96
IGHJ6*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV2-70D*04	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGAT	N/A	N/A	N/A	GGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACACGGATGGACTTC	TRMDF	263	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	46	46	43	3	0	93.5
CDR1-IMGT	47	76	30	23	7	0	76.7
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	148	21	20	1	0	95.2
FR3-IMGT	149	262	114	100	14	0	87.7
CDR3-IMGT (germline)	263	270	8	7	1	0	87.5
Total	N/A	N/A	270	244	26	0	90.4


Alignments

                                       <------------------FR1-IMGT------------------><----------CDR1-IMGT---------><-------------
                                         L  V  K  P  T  Q  T  L  T  L  T  C  A  F  S  G  F  S  L  S  T  G  G  M  R  V  S  W  I  R
                    Query_13479   1    GCTGGTGAAACCCACACAGACCCTCACGCTGACCTGCGCCTTTTCTGGGTTCTCACTTTCCACGGGGGGTATGCGTGTGAGCTGGATCCG  90
V  90.4% (244/270)  IGHV2-70D*04  30   ...........................A.........A....C..............CAG...TA.T..A....................  119
                                         L  V  K  P  T  Q  T  L  T  L  T  C  T  F  S  G  F  S  L  S  T  S  G  M  R  V  S  W  I  R

                                       -------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------------------------
                                         Q  P  P  G  K  A  L  E  W  L  A  R  I  D  W  E  D  D  K  F  Y  S  T  S  L  K  S  R  L  T
                    Query_13479   91   TCAGCCCCCAGGGAAGGCCCTGGAGTGGCTTGCACGCATTGATTGGGAAGATGATAAATTCTACAGTACATCTCTGAAGAGCAGACTCAC  180
V  90.4% (244/270)  IGHV2-70D*04  120  ................................................T.................C.............C...G.....  209
                                         Q  P  P  G  K  A  L  E  W  L  A  R  I  D  W  D  D  D  K  F  Y  S  T  S  L  K  T  R  L  T

                                       ---------------------FR3-IMGT----------------------------------------------------><--CDR3-
                                         I  Y  K  D  P  S  K  N  Q  I  V  L  R  M  T  N  M  G  P  A  D  T  G  T  Y  Y  C  T  R  M
                    Query_13479   181  CATCTACAAGGATCCGTCCAAAAACCAGATTGTCCTTAGAATGACCAACATGGGCCCTGCGGACACAGGCACTTATTACTGTACACGGAT  270
V  90.4% (244/270)  IGHV2-70D*04  210  .....C......CA.C............G.G.......C..............A.....T........C...G.........G.......  299
                                         I  S  K  D  T  S  K  N  Q  V  V  L  T  M  T  N  M  D  P  V  D  T  A  T  Y  Y  C  A  R   

                                       IMGT-->                                 
                                         D  F  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13479   271  GGACTTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  310
J  97.5% (39/40)    IGHJ6*02      23   ....G...................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_117405

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           388     4e-110
IGHD6-13*01                                                                                           18.0    0.57  
IGHJ5*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCGTGG	GCAGCAGCT	ACA	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCGTGGGCAGCAGCTACACGACCAC	AKDRGQQLHDH	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	249	1	0	99.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13480  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.6% (249/250)  IGHV3-23*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13480  91   AGTGGGTCTCAGGTATTAGTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  99.6% (249/250)  IGHV3-23*01  137  ............C.............................................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  R  G  Q  Q  L  H  
                    Query_13480  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGATCGTGGGCAGCAGCTACACG  270
V  99.6% (249/250)  IGHV3-23*01  227  ......................................................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (9/9)     IGHD6-13*01  8    ----------------------------------------------------------------------------.........-----  16
J  97.6% (40/41)    IGHJ5*02     11   ----------------------------------------------------------------------------------------..  12

                                      ---->                                  
                                      D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13480  271  ACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  97.6% (40/41)    IGHJ5*02     13   ...C...................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_338212

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACGGTAAAGGG	GGTTATTACT	GT	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACGGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTACGGACGTC	ARTVKGVITVYQYFATDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  R  P  G  K  G  L  E 
                    Query_13481  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCGCCCAGGGAAGGGACTGGAG  90
V  91.4% (222/243)  IGHV4-34*01  49   ................................G...T..................G..............C............G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  I  S  L  D  M  S  K  N 
                    Query_13481  91   TGGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGAGTCTCCATATCATTAGACATGTCCAAGAAT  180
V  91.4% (222/243)  IGHV4-34*01  139  .............................C..................C..A...........A........G......C.........C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  I  S  V  R  V  T  S  V  T  A  A  D  T  A  T  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y 
                    Query_13481  181  CAGATCTCCGTGAGGGTGACGTCTGTGACCGCCGCGGACACGGCTACTTATTACTGTGCGAGAACGGTAAAGGGGGTTATTACTGTCTAC  270
V  91.4% (222/243)  IGHV4-34*01  229  ...T.....C...A.C...GC........................GTG...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  20   --------------------------------------------------------------------------..........------  29
J  91.4% (53/58)    IGHJ6*02     5    --------------------------------------------------------------------------------------....  8

                                      -------------------->                                 
                                       Q  Y  F  A  T  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13481  271  CAGTACTTCGCTACGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
J  91.4% (53/58)    IGHJ6*02     9    T.C....A..G..T........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_338213

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            322     2e-90
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ5*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGTGA	GAGACTGAGT	GTAGTACCACCTG	GCACGAAAGGAGGTG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGAGAGACTGAGTGTAGTACCACCTGGCACGAAAGGAGGTGACTGGTTCGACCCC	ASERLSVVPPGTKGGDWFDP	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13482  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTGACTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-7*03   47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  M  I  N  E  D  G  R  A  R  F  Y  V  D  S  V  K  G  R  F  I  I  S  R  D  N  A  
                    Query_13482  91   AGTGGTTGGCCATGATAAATGAAGATGGACGTGCGAGATTCTATGTGGACTCTGTGAAGGGCCGATTCATCATTTCCAGAGACAACGCCA  180
V  91.2% (228/250)  IGHV3-7*03   137  .....G......AC.....GC........A...A..A..A.............................C...C................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  F  L  Q  M  Y  S  L  R  V  D  D  T  A  V  Y  Y  C  A  S  E  R  L  S  V  V  P  
                    Query_13482  181  AGAACTCGCTCTTTCTGCAAATGTACAGCCTGAGAGTCGACGACACGGCCGTCTATTATTGTGCGAGTGAGAGACTGAGTGTAGTACCAC  270
V  91.2% (228/250)  IGHV3-7*03   227  .......A..G.A..........A............C...G...........G.....C........A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD2-2*01   12   --------------------------------------------------------------------------------.........G  21

                                      R3-IMGT------------------------>                                  
                                      P  G  T  K  G  G  D  W  F  D  P  R  G  Q  G  T  L  V  I  V  S  S  
                    Query_13482  271  CTGGCACGAAAGGAGGTGACTGGTTCGACCCCAGGGGCCAGGGAACCCTGGTCATCGTCTCTTCAG  336
D  92.3% (12/13)    IGHD2-2*01   22   ...---------------------------------------------------------------  24
J  93.8% (45/48)    IGHJ5*02     4    ------------------..............T.....................C......C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_338214

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           349     2e-98
IGHD1-1*01                                                                                            10.3    120  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	CAACT	CACGGCCGCCTT	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGCAACTCACGGCCGCCTTACTTCTTTGACTAC	ARGGNSRPPYFFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  V  S  G  F  T  F  R  T  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13483  1    GGTCCCTGAGACTCTCCTGTGTAGTCTCTGGATTCACCTTTAGGACCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (236/249)  IGHV3-21*01  47   .....................C..C...............C..T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  G  S  S  T  S  L  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13483  91   AGTGGGTCTCATCCATTGGTAGTAGTACTAGTCTCATATACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.8% (236/249)  IGHV3-21*01  137  .................A.........G....TA............A...........................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  V  D  D  T  A  V  Y  Y  C  A  R  G  G  N  S  R  P  P  
                    Query_13483  181  AGAACTCAGTGTATCTGCAAATGAACAGCCTGAGAGTCGACGACACGGCTGTGTATTACTGTGCGAGAGGGGGCAACTCACGGCCGCCTT  270
V  94.8% (236/249)  IGHV3-21*01  227  ........C...........................C...G............................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD1-1*01   5    -------------------------------------------------------------------------.....------------  9

                                      ------------->                                  
                                      Y  F  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_13483  271  ACTTCTTTGACTACTGGGGCCAGGGAAGTCTGGTCACCGTCTCCTCAG  318
J  93.8% (45/48)    IGHJ4*02     1    ...A.......................CC...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_338215

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           318     5e-89
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_13484  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*02  49   .............................T.G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_13484  91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.4% (224/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_13484  181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.4% (224/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_13484  271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_64617

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_13485  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13485  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_13485  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13485  271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_117403

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           277     9e-77
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	242	3	3	0	0	100
Total	N/A	N/A	239	208	31	0	87


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  G  S  I  S  T  S  Y  W  T  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_13486  4    CCCTGAGACTCTCCTGCTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGACCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAAT  93
V  87.0% (208/239)  IGHV4-59*01  50   .....TCC...A.....A......................T.GT.A...C....G.............C...................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R  
                    Query_13486  94   GGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGAC  183
V  87.0% (208/239)  IGHV4-59*01  140  ......GG.....C.ATT................C..C...........C.....................G.A.............AC.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------CDR3-IMGT-
                                      H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G  
                    Query_13486  184  ACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGTG  273
V  87.0% (208/239)  IGHV4-59*01  230  .G...........G....G............T..............G............-------------------------------  288
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  93.3% (14/15)    IGHD3-22*01  7    ----------------------------------------------------------------------------..........A...  20

                                      ---------------------->                                  
                                      G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13486  274  GCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  330
D  93.3% (14/15)    IGHD3-22*01  21   .--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    -------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_64619

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            313     1e-87
IGHD3-3*01                                                                                            12.2    32   
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ACCCGGGTATTGCC	TACCATCTTTGG	TG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACCCGGGTATTGCCTACCATCTTTGGTGACTACGGTATGGACGTC	ARTRVLPTIFGDYGMDV	241	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	223	23	0	90.7


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  D  S  I  T  S  S  H  W  W  S  W  V  R  Q  P  P  G  R  G  L 
                    Query_13487  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCATCACCAGTAGTCACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAGGGGGCTG  90
V  90.7% (223/246)  IGHV4-4*01   49   ...............................G........G.......A.................................A.......  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  R  T  R  V  S  I  S  I  Y  K  S  K 
                    Query_13487  91   GAGTGGATTGGGGAAATCTATTATAGTGGGACCACGAACTACAATCCATCCCTCAGGACTCGAGTCTCCATTTCAATATACAAGTCCAAA  180
V  90.7% (223/246)  IGHV4-4*01   139  .....................C.........G...C........C..G.......A..G.......A....A...G..G..........G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------------CDR3-IMGT
                                       N  L  F  S  L  R  L  S  S  V  T  T  A  D  T  A  V  Y  F  C  A  R  T  R  V  L  P  T  I  F 
                    Query_13487  181  AATCTGTTCTCCCTGAGGCTGAGCTCTGTGACCACCGCGGACACGGCCGTCTATTTCTGTGCCAGAACCCGGGTATTGCCTACCATCTTT  270
V  90.7% (223/246)  IGHV4-4*01   229  ..C.A...........A................G................G....G......G...------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD3-3*01   5    --------------------------------------------------------------------------------...G..T...  14

                                      -------------------->                                 
                                       G  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13487  271  GGTGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  324
D  83.3% (10/12)    IGHD3-3*01   15   ..----------------------------------------------------  16
J  100.0% (50/50)   IGHJ6*02     13   ----..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_64618

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*03                                                                                           308     4e-86
IGHD4-4*01                                                                                            18.0    0.56 
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*03	IGHD4-4*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	ACTTA	TGACTACAG	GGGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTTATGACTACAGGGGGGGTTTTGACTAC	ATYDYRGGFDY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	242	3	3	0	0	100
Total	N/A	N/A	239	218	21	0	91.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  G  H  Y  Y  W  S  W  I  R  Q  T  P  G  E  G  L  E  
                    Query_13488  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCGGTCATTACTACTGGAGCTGGATCCGGCAGACCCCAGGGGAGGGACTGGAGT  93
V  91.2% (218/239)  IGHV4-59*03  50   .....TCC...A..........................A..AG.........................C........A............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  H  N  G  Y  T  T  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  T  S  K  K  
                    Query_13488  94   GGATTGGCTATATCTATCACAACGGGTACACCACCTACAACCCCTCCCTCGAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAGAAGC  183
V  91.2% (218/239)  IGHV4-59*03  140  .......G.........T...GT...AG.....A................A................A....................C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  T  Y  D  Y  R  G  G  F  D  Y  
                    Query_13488  184  AATTCTCCCTGAAGTTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGACTTATGACTACAGGGGGGGTTTTGACTACT  273
V  91.2% (218/239)  IGHV4-59*03  230  ..............C....C.......................................-------------------------------  288
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (9/9)     IGHD4-4*01   1    ----------------------------------------------------------------.........-----------------  9
J  100.0% (43/43)   IGHJ4*02     6    --------------------------------------------------------------------------------..........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13488  274  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (43/43)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_117409

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           391     6e-111
IGHD2-2*01                                                                                            10.3    134   
IGHJ3*01                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCTGAAGTCTTT	TACCA	CCGAG	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATGTC	ASLKSFTTEDAFDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	269	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  V  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  F  D  F  T  T  S
                    Query_13489  1    GCAGCTGGTGCAGTCTGGAGCAGTGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATTCGACTTTACCACCTC  90
V  93.4% (269/288)  IGHV5-51*01  6    .......................A..................................................A.AG........G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  Q  W  M  G  V  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_13489  91   TTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGCAATGGATGGGAGTCATCTATCCTGATGACTCTGATACCAGATATAGTCC  180
V  93.4% (269/288)  IGHV5-51*01  96   C.......................................G.G........GA............G..................C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  A  A  K  S  I  N  T  A  Y  L  Q  W  G  S  L  K  A  S  D  T  A
                    Query_13489  181  GTCCTTCCGAGGCCAGGTCACCATCTCAGCCGCCAAGTCCATCAACACTGCCTACCTGCAGTGGGGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (269/288)  IGHV5-51*01  186  ........A.......................A...........G...C...............A.........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  S  L  K  S  F  T  T  E  D  A  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13489  271  CATGTATTACTGTGCGAGCCTGAAGTCTTTTACCACCGAGGATGCTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  359
V  93.4% (269/288)  IGHV5-51*01  276  ..................-----------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                          
D  100.0% (5/5)     IGHD2-2*01   16   ------------------------------.....------------------------------------------------------  20
J  100.0% (49/49)   IGHJ3*01     2    ----------------------------------------.................................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_202820

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           364     5e-103
IGHD3-16*01                                                                                           12.2    35    
IGHJ6*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCC	TTGGGG	CGGC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCTTGGGGCGGCCTACGGTTTGGACGTC	ARPLGAAYGLDV	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	261	28	0	90.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  D  S  L  T  I  S  C  Q  V  S  G  Y  I  F  T  H  Y
                    Query_13490  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCGGGGGACTCTCTGACGATCTCCTGTCAGGTTTCTGGATACATCTTCACCCACTA  90
V  90.3% (261/289)  IGHV5-51*03  6    ...............................A..........G.......A..........A...G...........G...T...AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  V  A  G  K  G  L  E  W  M  G  V  I  Y  P  D  D  S  D  A  R  Y  S  P
                    Query_13490  91   TTGGATCGCCTGGGTGCGCCAGGTGGCCGGCAAAGGCCTAGAGTGGATGGGGGTCATCTATCCTGACGACTCTGATGCCAGATACAGCCC  180
V  90.3% (261/289)  IGHV5-51*03  96   C.......G.............A..C....G........G............A............GT.........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  L  V  T  I  S  V  D  K  S  L  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13490  181  GTCCTTTCAAGGCCTGGTCACCATCTCAGTCGACAAGTCCCTCAGTACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  90.3% (261/289)  IGHV5-51*03  186  ......C.......A..............C..........A....C....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  F  C  A  R  P  L  G  A  A  Y  G  L  D  V  W  G  Q  G  T  A  V  V  V  S  S 
                    Query_13490  271  CATTTACTTCTGTGCGAGACCCCTTGGGGCGGCCTACGGTTTGGACGTCTGGGGCCAAGGGACCGCGGTCGTCGTCTCGTCA  352
V  90.3% (261/289)  IGHV5-51*03  276  ...G..T.A..........---------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                
D  100.0% (6/6)     IGHD3-16*01  16   -----------------------......-----------------------------------------------------  21
J  89.8% (44/49)    IGHJ6*02     14   ---------------------------------.......A.......................A.....AC......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_276692

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           296     2e-82
IGHD3-10*01                                                                                           12.2    31   
IGHJ2*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGA	CGGGGA	TTGGAAG	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGACGGGGATTGGAAGTTCGATCTC	ARHDGDWKFDL	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	98	16	0	86
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	220	31	0	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  I  S  S  R  F  F  W  G  W  L  R  Q  P  P  K  K  G 
                    Query_13491  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCATCAGTAGTCGTTTCTTCTGGGGCTGGCTCCGCCAGCCCCCAAAGAAGGGG  90
V  87.6% (220/251)  IGHV4-39*01  49   ...............................G........G.......A...A..A..........A..............GG.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  H  D  S  G  N  R  W  S  N  P  T  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_13491  91   CTGGAGTGGATTGGGACTATCCATGACAGTGGGAACAGATGGTCCAACCCGACCCTCAAGAGTCGACTCACCATATCGGTGGACACGTCC  180
V  87.6% (220/251)  IGHV4-39*01  139  ................G....T..T.T.......G..CC.AC.A.......T..............G..........C..A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       M  N  Q  F  S  L  T  I  S  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  H  D  G  D  W  K  F 
                    Query_13491  181  ATGAACCAGTTCTCCCTGACGATTTCCTCTATGACCGCCGCTGACACGGCTGTCTATTACTGTGCGAGACATGACGGGGATTGGAAGTTC  270
V  87.6% (220/251)  IGHV4-39*01  229  .A.................A.C.GAG....G..........A...........G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01  15   --------------------------------------------------------------------------......----------  20
J  95.3% (41/43)    IGHJ2*01     11   ---------------------------------------------------------------------------------------...  13

                                      ----->                                  
                                       D  L  W  G  R  G  S  Q  V  T  V  S  S  
                    Query_13491  271  GATCTCTGGGGCCGTGGCTCCCAGGTCACTGTCTCCTCAG  310
J  95.3% (41/43)    IGHJ2*01     14   ..................A...T.................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_316060

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           318     6e-89
IGHD2-15*01                                                                                           10.3    118  
IGHJ3*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	CCCGCGTTGC	GGTAG	A	TGATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGCCCGCGTTGCGGTAGATGATTCTTTTGATCTC	ARARVAVDDSFDL	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  S  H  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13492  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACTAGTCACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-74*01  47   ..........................................G...CT..........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  N  D  G  S  L  T  H  Y  A  D  S  V  R  G  R  V  T  F  S  R  D  N  T  
                    Query_13492  91   TGTGGGTCTCACGTATTAATAATGATGGGAGTCTCACACACTATGCGGACTCCGTCAGGGGCCGAGTCACCTTCTCCAGAGACAACACCA  180
V  90.8% (226/249)  IGHV3-74*01  137  .....................G..........AG....AG...C...........G.A.......T.....A..............G...  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  R  T  L  Y  L  Q  M  T  S  L  R  A  D  D  T  A  V  Y  F  C  A  R  A  R  V  A  V  D  D  
                    Query_13492  181  AGAGAACACTGTATCTGCAGATGACCAGTCTGAGAGCCGACGACACGGCTGTCTATTTCTGTGCCAGAGCCCGCGTTGCGGTAGATGATT  270
V  90.8% (226/249)  IGHV3-74*01  227  ...AC..G...........A....A...............G...........G....A......A....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD2-15*01  17   -------------------------------------------------------------------------------.....------  21
J  92.0% (46/50)    IGHJ3*01     1    -------------------------------------------------------------------------------------....G  5

                                      ---------->                                  
                                      S  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13492  271  CTTTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCCTCAG  315
J  92.0% (46/50)    IGHJ3*01     6    ........G.................A.............T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_276695

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	109	5	0	95.6
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	295	282	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  
                    Query_13493  4    AGGTTCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCA  93
V  95.6% (282/295)  IGHV5-51*01  2    ....G............................A...................................G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  
                    Query_13493  94   ACTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACA  183
V  95.6% (282/295)  IGHV5-51*01  92   G...........G...........................C....................C...................C........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  D  
                    Query_13493  184  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGACA  273
V  95.6% (282/295)  IGHV5-51*01  182  ...........C.....................................C...........G......A.....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  
                    Query_13493  274  CCGCCATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  363
V  95.6% (282/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  92.9% (13/14)    IGHD1-26*01  4    ---------------------------------..........C...-------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    --------------------------------------------------.......A................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_13493  364  CGGTCACCGTCTCCTCA  380
J  98.2% (56/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_118301

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           346     2e-97
IGHD5-18*01                                                                                           21.8    0.045
IGHJ5*02                                                                                              89.1    6e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGAA	GTGGATACAACTTTGGT	CAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGAAGTGGATACAACTTTGGTCATAACTGGTTCGACCCC	ARDPTGSGYNFGHNWFDP	267	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	56	45	40	5	0	88.9
CDR1-IMGT	57	80	24	20	4	0	83.3
FR2-IMGT	81	131	51	48	3	0	94.1
CDR2-IMGT	132	152	21	20	1	0	95.2
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	263	242	21	0	92


Alignments

                                      <-----------------FR1-IMGT------------------><-------CDR1-IMGT------><--------------------
                                       L  V  Q  S  S  E  A  L  S  L  T  C  T  V  S  G  V  S  I  S  H  Y  Y  W  S  W  I  R  Q  P 
                    Query_13494  12   CTGGTGCAGTCCTCGGAGGCCCTGTCTCTCACCTGCACTGTCTCTGGTGTCTCCATAAGTCATTACTACTGGAGTTGGATCCGGCAGCCC  101
V  92.0% (242/263)  IGHV4-59*01  31   ......A..C.T......A.......C......................G......C...AG............C...............  120
                                       L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P 

                                      FR2-IMGT---------------------><-----CDR2-IMGT-----><--------------------------------------
                                       P  G  K  G  L  E  W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  T  S 
                    Query_13494  102  CCAGGGAAGGGACTGGAATGGATTGGATATATCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCACGTCA  191
V  92.0% (242/263)  IGHV4-59*01  121  .................G........G......T...................................................TA...  210
                                       P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S 

                                      --------------FR3-IMGT----------------------------------------------------><--------------
                                       V  D  T  T  K  N  Q  F  S  L  S  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  D  P  T 
                    Query_13494  192  GTAGACACGACCAAGAACCAGTTCTCCCTGAGCCTCAGTTCTGTGACCGTTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCCTACC  281
V  92.0% (242/263)  IGHV4-59*01  211  .........T.....................AG..G..C..........C.................................-------  293
                                       V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R          

                                      --------CDR3-IMGT--------------------->                                  
                                       G  S  G  Y  N  F  G  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13494  282  GGAAGTGGATACAACTTTGGTCATAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTAACCGTCTCCTCAG  354
D  88.2% (15/17)    IGHD5-18*01  1    ----.........G..A....----------------------------------------------------  17
J  98.0% (48/49)    IGHJ5*02     3    ------------------------...................................C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_65892

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            364     5e-103
IGHD3-3*01                                                                                            27.6    8e-04 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAGGGGGACTTCGGA	ATTTTTGGAGTGGT	GCATACGTAGGGGC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAGGGGGACTTCGGAATTTTTGGAGTGGTGCATACGTAGGGGCTATGGACGTC	ARVGGLRNFWSGAYVGAMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	241	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  G  S  R  L  T  F  S  T  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_13495  1    GGTCCCTGAGACTCTCCTGTGCAGGCTCTCGATTAACCTTTAGTACTTATTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (241/249)  IGHV3-7*03   47   ........................C....G....C..........GC..........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13495  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAGTACTATGTGGACTCTGTAAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.8% (241/249)  IGHV3-7*03   137  .....................................A.................G..................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  G  L  R  N  F  
                    Query_13495  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGTAGGGGGACTTCGGAATTTTT  270
V  96.8% (241/249)  IGHV3-7*03   227  .....................................................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD3-3*01   9    ------------------------------------------------------------------------------------......  14

                                      R3-IMGT------------------------>                                 
                                      W  S  G  A  Y  V  G  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13495  271  GGAGTGGTGCATACGTAGGGGCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  335
D  100.0% (14/14)   IGHD3-3*01   15   ........---------------------------------------------------------  22
J  100.0% (43/43)   IGHJ6*02     20   ----------------------...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_76555

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            375     3e-106
IGHD1-26*01                                                                                           12.2    35    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	265	25	0	91.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  T  Y
                    Query_13496  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACCACTTA  90
V  91.4% (265/290)  IGHV1-8*01   6    ..................G...............................................T........C..........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F  A  Q
                    Query_13496  91   TGATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTTGCACA  180
V  91.4% (265/290)  IGHV1-8*01   96   .................................A..G..............A..............C.G...T..........A......  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D  T  A
                    Query_13496  181  GAGATTCAAGGGCAGAGTCACCATGACTAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGACACGGC  270
V  91.4% (265/290)  IGHV1-8*01   186  ..AG...C...................C........C.....A.................GC............G..C..AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                 
                                        I  Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_13496  271  CATATATTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  352
V  91.4% (265/290)  IGHV1-8*01   276  .G.G................--------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   -----------------------------...G.....--------------------------------------------  18
J  100.0% (40/40)   IGHJ5*02     11   ------------------------------------------........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_50150

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         305     3e-85
IGHD3-22*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	TCACCCAC	TGATAGTA	ATAATAT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGATCACCCACTGATAGTAATAATATC	ARSPTDSNNI	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	56	27	24	3	0	88.9
FR2-IMGT	57	107	51	48	3	0	94.1
CDR2-IMGT	108	128	21	19	2	0	90.5
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	245	220	25	0	89.8


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  R  L  S  C  A  V  S  G  Y  S  V  G  S  G  Y  Y  W  G  W  I  R  Q  S  P  G  K  G  L  
                    Query_13497    4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTTACTCCGTCGGCAGTGGTTATTACTGGGGCTGGATCCGGCAGTCCCCAGGGAAGGGGCTGG  93
V  89.8% (220/245)  IGHV4-38-2*01  50   .....TCC...A.......................A..A..........C.....................C..................  139
                                           L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  A  T  I  H  H  S  G  S  T  H  Y  N  P  S  L  R  S  R  V  L  I  S  I  D  T  S  M  
                    Query_13497    94   AGTGGATTGCGACTATCCATCATAGTGGCAGCACCCACTACAACCCGTCCCTCAGGAGTCGAGTTCTTATATCAATAGACACGTCCATGA  183
V  89.8% (220/245)  IGHV4-38-2*01  140  .........G..G....T..........G......T..................A.........CACC......G............A..  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><----------CDR3-IMGT---------> 
                                        N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  S  P  T  D  S  N  N  I  
                    Query_13497    184  ACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCGCCGCAGACACGGCCATTTATTACTGTGCAAGATCACCCACTGATAGTAATAATATCT  273
V  89.8% (220/245)  IGHV4-38-2*01  230  ...............A......C........................G.G...........G...-------------------------  294
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (8/8)     IGHD3-22*01    10   -------------------------------------------------------------------------........---------  17
J  97.1% (34/35)    IGHJ4*02       14   ----------------------------------------------------------------------------------------..  15

                                                                         
                                        W  G  Q  G  T  Q  V  T  V  S  S  
                    Query_13497    274  GGGGCCAGGGAACCCAGGTCACCGTCTCCTCAG  306
J  97.1% (34/35)    IGHJ4*02       16   ...............T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_207928

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           213     2e-57
IGHD3-16*01                                                                                           25.7    0.003
IGHJ3*01                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACCTAT	GTTTGGGGGAGTT	TACGCCGCAATCACGATTGCCTTAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACCTATGTTTGGGGGAGTTTACGCCGCAATCACGATTGCCTTACTGTC	ARGLLIEDPTYVWGSLRRNHDCLTV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	35	16	0	68.6
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	87	27	0	76.3
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	190	54	0	77.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  V  R  Q  P  P  G  G  G  L  Q 
                    Query_13498  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGAACTTACTACTGGCACTGGGTGCGGCAACCTCCAGGGGGGGGTCTGCAG  90
V  77.9% (190/244)  IGHV4-59*01  49   .......................C.......G.......A.T.G..........AG....A.C.....G..C......AA...A...G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  A  M  F  L  S  T  G  T  T  L  Y  N  P  S  V  R  G  R  V  T  V  S  G  D  M  S  R  N 
                    Query_13498  91   TGGCTTGCCATGTTCTTATCCACTGGGACCACCCTCTACAACCCCTCCGTCAGGGGTCGTGTCACCGTGTCGGGCGACATGTCTCGGAAT  180
V  77.9% (190/244)  IGHV4-59*01  139  ...A...GGTATA...AT.A..G.....G....AA.............C...A.A....A......A.A..A.TA....C...CAA...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_13498  181  CAGTTGTCCCTCAACCTCATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACCTAT  270
V  77.9% (190/244)  IGHV4-59*01  229  .....C.....G..G..G.G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  L  R  R  N  H  D  C  L  T  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_13498  271  GTTTGGGGGAGTTTACGCCGCAATCACGATTGCCTTACTGTCTGGGGCCAGGGGACACCGGTCACCGTCTCTTCAG  346
D  100.0% (13/13)   IGHD3-16*01  14   .............---------------------------------------------------------------  26
J  92.1% (35/38)    IGHJ3*01     13   --------------------------------------............A......AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_273388

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            324     8e-91
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGCTTTG	ACTATGATAGTCGTGGCTTTTAC	AGACGTTCTA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCTTTGACTATGATAGTCGTGGCTTTTACAGACGTTCTAACTACTTTGACTTC	ARGFDYDSRGFYRRSNYFDF	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	23	6	0	79.3
CDR1-IMGT	30	56	27	23	4	0	85.2
FR2-IMGT	57	107	51	51	0	0	100
CDR2-IMGT	108	128	21	21	0	0	100
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	227	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><--------CDR1-IMGT--------><--------------------FR2-IMGT-----
                                         S  L  R  L  S  C  T  V  S  G  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  
                    Query_13499  1    GGTCCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCACTACTAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGC  90
V  91.9% (227/247)  IGHV4-4*01   47   ..A.....TCC...A.....G.....................GC.G......C.....................................  136
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  Q  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  K  S  
                    Query_13499  91   TGGAGTGGATTGGGGAAATCTATCATAGTGGGAGCACCCAGTACAACCCGTCACTCAGGAGTCGAGTCACGATATCAGTAGACAAGTCCA  180
V  91.9% (227/247)  IGHV4-4*01   137  ......................................A.C...........C....A............C...................  226
                                      L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  I  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  F  D  Y  D  S  R  
                    Query_13499  181  AGAACCAGATCTCCCTGAGGTTGAGTTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGGCTTTGACTATGATAGTCGTG  270
V  91.9% (227/247)  IGHV4-4*01   227  ........T.........A.C....C...............................G.........-----------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A                          
D  87.0% (20/23)    IGHD3-22*01  6    ---------------------------------------------------------------------------...........A...  20

                                      R3-IMGT------------------------>                                  
                                      G  F  Y  R  R  S  N  Y  F  D  F  W  G  R  G  T  L  V  A  V  S  S  
                    Query_13499  271  GCTTTTACAGACGTTCTAACTACTTTGACTTCTGGGGCCGGGGAACCCTGGTCGCGGTCTCCTCAG  336
D  87.0% (20/23)    IGHD3-22*01  21   .T.A....----------------------------------------------------------  28
J  91.7% (44/48)    IGHJ4*02     1    ------------------............A........A.............A.C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_273389

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            318     6e-89
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GAGCAG	GCAGTGGCT	CAAC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGAGCAGGCAGTGGCTCAACCTTTGCCTAC	ATGAGSGSTFAY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  E  F  V  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13500  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGAATTCGTCTTCAGTTCTTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-7*01   47   .....................C........G....AC...T...AGC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_13500  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAACACTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACCCCA  180
V  90.8% (226/249)  IGHV3-7*01   137  ......................................T......T........................................G...  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  T  S  L  Y  L  Q  M  N  F  L  R  G  D  D  S  A  V  Y  Y  C  A  T  G  A  G  S  G  S  T  
                    Query_13500  181  AGACTTCACTATATCTGCAAATGAATTTCCTGAGAGGTGACGACTCGGCTGTGTACTACTGTGCGACAGGAGCAGGCAGTGGCTCAACCT  270
V  90.8% (226/249)  IGHV3-7*01   227  ...AC.....G..............CAG........CC..G...A..........T..........G..---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-19*01  8    ---------------------------------------------------------------------------.........------  16
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13500  271  TTGCCTACTGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  312
J  95.5% (42/44)    IGHJ4*02     7    ...A..................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_273384

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           375     3e-106
IGHD2-2*01                                                                                            23.8    0.011 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAG	TTGTAGTAGTAACACCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGTTGTAGTAGTAACACCTGCTACTCCGAAATGGACGTC	ARVSCSSNTCYSEMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	242	2	0	99.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13501  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.2% (242/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13501  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGGTAGACACGTCCAAGAAC  180
V  99.2% (242/244)  IGHV4-59*01  139  .......................................................................A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  C  S  S  N  T  C  Y 
                    Query_13501  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTAAGTTGTAGTAGTAACACCTGCTAC  270
V  99.2% (242/244)  IGHV4-59*01  229  ...............................................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (16/18)    IGHD2-2*01   7    --------------------------------------------------------------------...........C..G...----  24
J  94.2% (49/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       S  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13501  271  TCCGAAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  94.2% (49/52)    IGHJ6*02     15   .A..GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_273385

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           315     5e-88
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGGTGTACGGAAATCAG	TATGATGGTAGTGGTTA	CCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGTGTACGGAAATCAGTATGATGGTAGTGGTTACCCTGACTCC	ARGVYGNQYDGSGYPDS	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	222	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  S  G  S  I  S  A  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_13502  1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGGCTCCATCAGTGCTTACTACTGGAGTTGGGTCCGGCAGCCCCCAGGGAAGGGGCTGGAG  90
V  91.4% (222/243)  IGHV4-59*08  49   ...........................G..............AG............C...A......................A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  L  Y  Y  R  G  S  T  R  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  K 
                    Query_13502  91   TGGATTGGGAATCTGTATTACAGAGGTAGTACCAGATACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAG  180
V  91.4% (222/243)  IGHV4-59*08  139  .........T..A.C........T..G..C....AC....................................G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  E  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  Y  G  N  Q  Y  D  G 
                    Query_13502  181  CAATTCTCCCTGGAGGTGCGCTCTGTCACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAGGGGTGTACGGAAATCAGTATGATGGT  270
V  91.4% (222/243)  IGHV4-59*08  229  ..G.........A..C..A.......G....................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD3-22*01  8    ---------------------------------------------------------------------------------......A..  16

                                      ----------------->                                  
                                       S  G  Y  P  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13502  271  AGTGGTTACCCTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  94.1% (16/17)    IGHD3-22*01  17   ........--------------------------------------------  24
J  97.6% (40/41)    IGHJ4*02     8    -----------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_273386

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           343     2e-96
IGHD3-16*01                                                                                           14.1    8.3  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	N/A	CGTTGGGGGG	GCTGTCTTTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCGTTGGGGGGGCTGTCTTTGGACGGTATGGACGTC	AKALGGLSLDGMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	234	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  E  F  T  F  S  N  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13503  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGAATTCACCTTTAGCAACTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (234/249)  IGHV3-23*01  47   ..............................G..............G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  F  S  G  P  L  T  S  T  Y  F  A  V  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13503  91   AGTGGGTCTCAGGATTTAGTGGTCCTCTTACTAGCACATACTTCGCAGTCTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (234/249)  IGHV3-23*01  137  ............CTA........AG.GG.GG...........A.....A.........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  L  G  G  L  S  L  
                    Query_13503  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTATTGTGCGAAAGCGTTGGGGGGGCTGTCTTTGG  270
V  94.0% (234/249)  IGHV3-23*01  227  ..........................................................C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.0% (9/10)     IGHD3-16*01  13   ---------------------------------------------------------------------....T.....-----------  22

                                      ------------->                                 
                                      D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13503  271  ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  100.0% (47/47)   IGHJ6*02     16   ...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_273387

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         399     3e-113
IGHD6-13*01                                                                                           18.0    0.68  
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCACAGCGCGG	GCACCAGCTGGT	GGTTTTCGCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCACAGCGCGGGCACCAGCTGGTGGTTTTCGCCACTACTACGGTGTGGACGTC	ATTARAPAGGFRHYYGVDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	271	16	0	94.4


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y
                    Query_13504    1    GCAGCTGGTGCAGTCTGGAGCAGAGCTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGCAAGGGTTCTGGATACAGTTTTACCAGCTA  90
V  94.4% (271/287)  IGHV5-10-1*01  6    .........................G..................................T.................C...........  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  V  G  A  I  N  P  S  D  S  D  P  N  Y  S  P
                    Query_13504    91   CTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGGTGGGGGCGATTAATCCTAGTGACTCTGATCCCAACTACAGCCC  180
V  94.4% (271/287)  IGHV5-10-1*01  96   ........G.....................................A.....AG....G..............T..A.............  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  I  R  G  H  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  H  W  S  S  L  M  A  S  D  T  A
                    Query_13504    181  GTCCATCCGAGGCCACGTCACCATCTCAGCTGACAGGTCCATCAGCACTGCCTACCTGCACTGGAGCAGCCTGATGGCCTCGGACACCGC  270
V  94.4% (271/287)  IGHV5-10-1*01  186  ....T...A..........................A........................G.............A...............  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------------------CDR3-IMGT----------------------->                    
                                          M  Y  Y  C  A  T  T  A  R  A  P  A  G  G  F  R  H  Y  Y  G  V  D  V  W  G  Q  G  T  T  V
                    Query_13504    271  CATGTACTACTGTGCGACCACAGCGCGGGCACCAGCTGGTGGTTTTCGCCACTACTACGGTGTGGACGTCTGGGGCCAGGGGACCACGGT  360
V  94.4% (271/287)  IGHV5-10-1*01  276  ......T..........-------------------------------------------------------------------------  292
                                          M  Y  Y  C  A                                                                           
D  91.7% (11/12)    IGHD6-13*01    8    ----------------------------...G........--------------------------------------------------  19
J  96.2% (51/53)    IGHJ6*02       10   --------------------------------------------------...........A................A...........  49

                                                     
                                          T  V  S  S 
                    Query_13504    361  CACCGTCTCCTCA  373
J  96.2% (51/53)    IGHJ6*02       50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_273380

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           307     1e-85
IGHD6-6*01                                                                                            19.9    0.15 
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-6*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCC	AGTATAGAAGATCGTC	GGCTGGT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCAGTATAGAAGATCGTCGGCTGGTTGCTTTTGATATC	ARPSIEDRRLVAFDI	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	219	23	0	90.5


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  R  G  Y  Y  W  S  W  V  R  Q  P  P  G  K  G  L  Q  
                    Query_13505  4    CCCTGAGACTCTCCTGTGCTGTCTATGGTGGGTCCTTCAGGGGTTACTACTGGAGCTGGGTCCGTCAGCCCCCAGGGAAGGGGCTGCAGT  93
V  90.5% (219/242)  IGHV4-34*01  50   .....TCC...A....C.......................T..................A....C.....................G...  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  E  I  N  H  R  G  S  S  Y  H  S  P  S  L  K  S  R  V  T  M  S  V  D  T  S  M  N  
                    Query_13505  94   GGCTTGGCGAAATCAACCATAGAGGAAGTAGCTATCACAGCCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTTGACACGTCCATGAACC  183
V  90.5% (219/242)  IGHV4-34*01  140  ..A....G........T.....T.....C.C.A.CT...A...........................A.....A..........A.....  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------CDR3-IMGT-------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  S  I  E  D  R  R  L  V  
                    Query_13505  184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGACCCAGTATAGAAGATCGTCGGCTGGTTG  273
V  90.5% (219/242)  IGHV4-34*01  230  ..............................................G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  87.5% (14/16)    IGHD6-6*01   2    -----------------------------------------------------------------.......C..C.....---------  17
J  100.0% (47/47)   IGHJ3*02     4    ----------------------------------------------------------------------------------------..  5

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13505  274  CTTTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  318
J  100.0% (47/47)   IGHJ3*02     6    .............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_273381

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           308     4e-86
IGHD1-26*01                                                                                           12.2    31   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTACCTTGATTC	GGGAGC	GTGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACTACCTTGATTCGGGAGCGTGGTGGTTCGACCCC	AKDYLDSGAWWFDP	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	22	4	0	84.6
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	126	24	16	8	0	66.7
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	247	222	25	0	89.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  A  A  S  G  F  T  F  S  T  C  A  M  T  W  V  R  Q  G  P  G  K  G  L  E  
                    Query_13506  2    CCCTGTCCCTCACCTGTGCAGCCTCTGGATTCACCTTTAGCACCTGTGCCATGACCTGGGTCCGCCAGGGACCAGGGAAGGGGCTGGAGT  91
V  89.9% (222/247)  IGHV3-23*01  50   .....AGA...T..............................G..A........G..............CT...................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  S  M  T  A  S  G  H  Y  T  Y  Y  A  H  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_13506  92   GGGTCTCAAGTATGACTGCTAGTGGACATTACACATATTACGCACACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGA  181
V  89.9% (222/247)  IGHV3-23*01  140  ........GC...T.G..G......TGG.AG......C......G.............................................  229
                                      W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  L  Y  L  Q  M  T  S  L  R  D  E  D  T  A  V  Y  F  C  A  K  D  Y  L  D  S  G  A  W  
                    Query_13506  182  ACACGCTGTATCTGCAAATGACTAGCCTGAGAGACGAGGACACGGCCGTATATTTCTGTGCGAAAGACTACCTTGATTCGGGAGCGTGGT  271
V  89.9% (222/247)  IGHV3-23*01  230  .....................AC..........C....................A............-----------------------  296
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                          
D  100.0% (6/6)     IGHD1-26*01  9    -------------------------------------------------------------------------------......-----  14
J  100.0% (46/46)   IGHJ5*02     6    -----------------------------------------------------------------------------------------.  6

                                      ---------->                                  
                                      W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13506  272  GGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (46/46)   IGHJ5*02     7    .............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_273382

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           343     2e-96
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACACA	TGGCACCAATA	ACTATGGTTCGGGGAG	GCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACATGGCACCAATAACTATGGTTCGGGGAGGCCCTTTGACGAC	ATHGTNNYGSGRPFDD	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  P  Y  Y  W  A  W  F  R  Q  P  P  G  K  G 
                    Query_13507  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTAGTCCTTACTACTGGGCCTGGTTCCGCCAGCCCCCAGGGAAGGGG  90
V  93.6% (235/251)  IGHV4-39*01  49   ................................................AG...........G....A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  N  T  Q  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  P 
                    Query_13507  91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAACACCCAGTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACACGCCC  180
V  93.6% (235/251)  IGHV4-39*01  139  ..................................G....T.C.............................................T..  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       G  N  Q  F  S  L  K  L  N  F  V  T  A  A  D  T  A  V  Y  Y  C  A  T  H  G  T  N  N  Y  G 
                    Query_13507  181  GGGAATCAGTTCTCCCTGAAACTGAATTTTGTGACCGCCGCAGACACGGCTGTGTATTACTGTGCGACACATGGCACCAATAACTATGGT  270
V  93.6% (235/251)  IGHV4-39*01  229  AA...C..............G....GC.C......................................G...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (16/16)   IGHD3-10*01  6    ----------------------------------------------------------------------------------........  13

                                      GT------------------>                                  
                                       S  G  R  P  F  D  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13507  271  TCGGGGAGGCCCTTTGACGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  100.0% (16/16)   IGHD3-10*01  14   ........-----------------------------------------------  21
J  97.7% (43/44)    IGHJ4*02     5    -----------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_273383

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           293     2e-81
IGHD6-19*01                                                                                           27.6    8e-04
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	GACGCCTC	ATAGCAGTGGCTGG	GCGGGGGAGGGC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGACGCCTCATAGCAGTGGCTGGGCGGGGGAGGGCATGGACGTC	VRTPHSSGWAGEGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	217	30	0	87.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  R  F  G  D  C  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13508  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCAGGATTCAGGTTCGGTGACTGTGGCATGCACTGGGTCCGCCAAGCTCCAGGCAAGGGGCTGG  90
V  87.9% (217/247)  IGHV3-30*03  47   .....................C......T.......CC...A..AG..A.....................G...................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  S  I  S  D  D  G  T  T  E  N  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  S  
                    Query_13508  91   AGTGGGTGGCATCCATCTCAGATGATGGCACGACTGAAAACTATGCAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAATTCCA  180
V  87.9% (217/247)  IGHV3-30*03  137  ...........GTT..A...T.......A.GT.A.A..T..............................C....................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  S  L  Q  M  N  S  L  R  H  E  D  T  A  V  F  F  C  V  R  T  P  H  S  S  G  W  
                    Query_13508  181  AGAACACCCTGTCTCTGCAAATGAACAGCCTGCGACATGAGGACACGGCTGTTTTTTTCTGTGTGAGGACGCCTCATAGCAGTGGCTGGG  270
V  87.9% (217/247)  IGHV3-30*03  227  .......G....A...................A..GC...............G.A..A.....C...-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (14/14)   IGHD6-19*01  5    ---------------------------------------------------------------------------..............-  18

                                      T------------------>                                 
                                      A  G  E  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13508  271  CGGGGGAGGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  100.0% (42/42)   IGHJ6*02     21   -----------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_32793

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*03                                                                                           302     3e-84
IGHD2-15*01                                                                                           10.3    127  
IGHJ6*02                                                                                              85.3    8e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*03	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATAGA	TC	AGGAT	GTGAACATACCCGCTGGCCTCCGGCTCCACTTT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATAGATCAGGATGTGAACATACCCGCTGGCCTCCGGCTCCACTTTTACGGTCTGGACGTC	AIDQDVNIPAGLRLHFYGLDV	244	306	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	222	29	0	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  V  S  N  D  D  Y  F  W  S  W  I  R  Q  S  P  G  K  G 
                    Query_13509  1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCGTCAGTAATGATGATTACTTCTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGA  90
V  88.4% (222/251)  IGHV4-61*03  49   ..................A....C.................C.G..G.AG.....A...................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  S  K  S  G  I  T  K  S  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S 
                    Query_13509  91   CTGGAATGGATTGGCTACATCTCCAAAAGTGGGATCACCAAGTCCAACCCCTCCCTCAAGAGTCGAGTCTCCATCTCAGTTGACACGTCC  180
V  88.4% (222/251)  IGHV4-61*03  139  .....G........G..T....ATT.C.......G......C.A.........................A....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------------
                                       T  N  R  F  S  L  K  L  T  S  V  T  A  V  D  T  A  V  Y  Y  C  A  I  D  Q  D  V  N  I  P 
                    Query_13509  181  ACGAACCGCTTCTCCCTGAAACTGACCTCTGTAACCGCTGTGGACACGGCCGTGTATTACTGTGCGATAGATCAGGATGTGAACATACCC  270
V  88.4% (222/251)  IGHV4-61*03  229  .A.....A............G....G......G.......C..........................G...-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD2-15*01  1    -------------------------------------------------------------------------.....------------  5

                                      CDR3-IMGT-------------------------->                                
                                       A  G  L  R  L  H  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_13509  271  GCTGGCCTCCGGCTCCACTTTTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTC  338
J  97.9% (46/47)    IGHJ6*02     15   ---------------------......A........................................  61


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_205716

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           341     5e-96
IGHD6-13*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGATGGGGG	AGCAGCAGCTGGT	CTGCCCCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATCGATGGGGGAGCAGCAGCTGGTCTGCCCCTCACTTTGACTGC	TRDRWGSSSWSAPHFDC	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	22	8	0	73.3
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	237	19	0	92.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13510  1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCAACTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.6% (237/256)  IGHV3-49*04  47   ....................................C.....................................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  V  R  S  Y  T  H  G  G  T  T  A  Y  A  A  A  V  K  G  R  F  T  I  S  R  D  
                    Query_13510  91   AGTGGGTTGGCTTCGTGAGAAGTTATACCCATGGTGGGACAACAGCTTACGCCGCGGCTGTGAAAGGCAGATTCACCATCTCAAGGGATG  180
V  92.6% (237/256)  IGHV3-49*04  137  .......A..T...A.T.....CA.AG.TT...............AA.........T............................A....  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  T  S  I  A  Y  L  E  M  D  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  D  R  W  G  S  
                    Query_13510  181  ATTCCACAAGCATCGCCTATCTGGAAATGGACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGCACTAGAGATCGATGGGGGAGCA  270
V  92.6% (237/256)  IGHV3-49*04  227  ......A................C.....A.....................................T........--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (13/13)   IGHD6-13*01  7    --------------------------------------------------------------------------------------....  10

                                      DR3-IMGT-------------------->                                  
                                      S  S  W  S  A  P  H  F  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13510  271  GCAGCTGGTCTGCCCCTCACTTTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD6-13*01  11   .........------------------------------------------------------  19
J  97.8% (44/45)    IGHJ4*02     4    ------------------.........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_253706

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            339     2e-95
IGHD3-3*01                                                                                            37.2    9e-07
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAATA	AGGGG	TACGATTTTTGGAGTGGTT	CC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAAATAAGGGGTACGATTTTTGGAGTGGTTCCGACTAC	AKNKGYDFWSGSDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	24	0	0	100
FR2-IMGT	51	101	51	50	1	0	98
CDR2-IMGT	102	125	24	23	1	0	95.8
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	249	10	9	1	0	90
Total	N/A	N/A	235	226	9	0	96.2


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 
                    Query_13511  15   TGTGCAGCCTCTGGATTCACCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCAGGGAAGGGCCTAGAGTGGGTCTCAGGTATT  104
V  96.2% (226/235)  IGHV3-9*01   64   .......................................................................G..................  153
                                       C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  W  N  S  G  S  L  D  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_13511  105  AGTTGGAATAGTGGTAGCCTAGACTATGCGGACTCTGTGAAGGGCCGATTCTCCATCTCCCGAGACAACGCCAAGAACTCCCTCTATCTG  194
V  96.2% (226/235)  IGHV3-9*01   154  ..................A...G............................A........A......................G......  243
                                       S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------------CDR3-IMGT--------------->   
                                       Q  M  N  S  L  R  T  E  D  T  A  F  Y  Y  C  A  K  N  K  G  Y  D  F  W  S  G  S  D  Y  W 
                    Query_13511  195  CAAATGAACAGTCTGAGAACTGAGGACACGGCCTTCTATTACTGTGCAAAAAATAAGGGGTACGATTTTTGGAGTGGTTCCGACTACTGG  284
V  96.2% (226/235)  IGHV3-9*01   244  ..................G................G...............G...-----------------------------------  298
                                       Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                                     
D  100.0% (19/19)   IGHD3-3*01   5    ------------------------------------------------------------...................-----------  23
J  100.0% (40/40)   IGHJ4*02     9    ---------------------------------------------------------------------------------.........  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_13511  285  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (40/40)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_65896

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           347     7e-98
IGHD6-13*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGCAC	CAGCAGCTGGTAC	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCACCAGCAGCTGGTACTTTTGACTAC	ARGAPAAGTFDY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  A  N  Y  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_13512  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGCTAATTATTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  94.4% (236/250)  IGHV4-31*03  49   ..............................................G.GG...C.......G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  T  G  S  T  Y  Y  D  P  S  L  K  S  R  I  S  M  S  V  G  T  S 
                    Query_13512  91   CTGGAGTGGATTGGGTACATCTATTACACTGGGAGCACCTACTACGACCCTTCCCTCAAGAGTCGAATTTCCATGTCAGTAGGCACGTCT  180
V  94.4% (236/250)  IGHV4-31*03  139  ............................G................A....G...............G..A....A.......A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  P  A  A  G  T 
                    Query_13512  181  AAGAACCAGTTCTCCCTGAAGCTGACCTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGGGGCACCAGCAGCTGGTACT  270
V  94.4% (236/250)  IGHV4-31*03  229  .........................G...........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD6-13*01  9    ----------------------------------------------------------------------------.............-  21

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13512  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (43/43)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_276698

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           343     2e-96
IGHD1-26*01                                                                                           12.2    34   
IGHJ3*01                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARAKGIAVIVDAFDF	261	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	23	1	0	95.8
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	98	16	0	86
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	243	24	0	91


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  
                    Query_13513  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGC  90
V  91.0% (243/267)  IGHV4-59*01  26   ................T........................A.....................G..........................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  S  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  
                    Query_13513  91   AGTCCCCGGGGAAGGGACTGGAGTGGATTGGATATATCTATTACAGAGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTG  180
V  91.0% (243/267)  IGHV4-59*01  116  ..C....A.......................G..............T....G.....A......C.....CC................CA  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      V  S  V  D  M  S  N  N  R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  
                    Query_13513  181  TGTCAGTAGACATGTCCAACAACCGGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGTGCGAGAGCTA  270
V  91.0% (243/267)  IGHV4-59*01  206  .A..........C......G....A...........AG.................T.......CG.....G................---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      --------CDR3-IMGT----------------->                                  
                                      K  G  I  A  V  I  V  D  A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_13513  271  AGGGTATCGCTGTTATAGTAGATGCTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  339
D  100.0% (6/6)     IGHD1-26*01  3    -------------......--------------------------------------------------  8
J  91.8% (45/49)    IGHJ3*01     2    --------------------............G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_175154

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           434     4e-124
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	N/A	ACCCTCGG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCCTCGGTGCTCTTGATATC	ARTLGALDI	284	310	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	283	5	0	98.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_13514  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGCTACACCTTTACCAGCTAT  91
V  98.3% (283/288)  IGHV1-18*01  7    .......................................................................T..................  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_13514  92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAATTATGCACAG  181
V  98.3% (283/288)  IGHV1-18*01  97   ...................................G.........................C..................C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_13514  182  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  98.3% (283/288)  IGHV1-18*01  187  ...C......................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------CDR3-IMGT-------->                                  
                                       V  Y  Y  C  A  R  T  L  G  A  L  D  I  W  G  Q  G  A  M  V  T  V  S  S  
                    Query_13514  272  GTGTATTACTGTGCGAGAACCCTCGGTGCTCTTGATATCTGGGGCCAAGGGGCAATGGTCACCGTCTCTTCAG  344
V  98.3% (283/288)  IGHV1-18*01  277  ..................-------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                        
J  95.7% (45/47)    IGHJ3*02     4    --------------------------....T....................A.....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_228739

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           400     9e-114
IGHD3-3*01                                                                                            10.3    132   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TTAGGGGCGAGGGTA	ATTTT	CTTCAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTAGGGGCGAGGGTAATTTTCTTCAGTAC	ARLRGEGNFLQY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	273	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  D  F  R  R  Y
                    Query_13515  1    GCAGCTGGTGCAGTCTGGAGGAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACGACTTTAGGAGATA  90
V  94.1% (273/290)  IGHV5-51*01  6    ....................C............................................G..........AG.....CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  A  G  K  G  L  E  Y  M  G  I  I  Y  P  N  D  S  D  I  R  Y  G  P
                    Query_13515  91   CTGGATCGGCTGGGTGCGCCAGATGGCCGGGAAAGGCCTGGAGTACATGGGGATCATCTATCCTAATGACTCTGATATCAGATACGGTCC  180
V  94.1% (273/290)  IGHV5-51*01  96   .........................C..................GG..................GG...........C.......A.C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  K  G  Q  V  T  M  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13515  181  GTCCTTCAAAGGCCAGGTCACCATGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.1% (273/290)  IGHV5-51*01  186  .......C................C.................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  Y  C  A  R  L  R  G  E  G  N  F  L  Q  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_13515  271  CATGTATTACTGTGCGAGACTTAGGGGCGAGGGTAATTTTCTTCAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  353
V  94.1% (273/290)  IGHV5-51*01  276  ....................---------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (5/5)     IGHD3-3*01   9    -----------------------------------.....-------------------------------------------  13
J  97.3% (36/37)    IGHJ4*02     12   ----------------------------------------------.................................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_228738

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           346     2e-97
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTCTGTG	AGCAGTGCCTGGT	CGTTTGGTCCCCCCCCACGACTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCTGTGAGCAGTGCCTGGTCGTTTGGTCCCCCCCCACGACTCTACTACCTCGACTGC	ARHSVSSAWSFGPPPRLYYLDC	250	315	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	135	27	21	0	6	77.8
FR3-IMGT	136	249	114	107	7	0	93.9
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	241	10	6	93.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  S  S  Y  H  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_13516  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTAGCAGTTACCACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.8% (241/257)  IGHV4-39*01  49   ...............................G...............T......T...................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  N  T  N  Y  N  P  S  L  E  S  R  V  T  M  S  V  D 
                    Query_13516  91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCAACACCAACTACAACCCGTCCCTCGAGAGTCGAGTAACCATGTCCGTAGAC  180
V  93.8% (241/257)  IGHV4-39*01  139  ...................................------....T.................A..........C.....A.........  222
                                       L  E  W  I  G  S  I  Y  Y  S  G  S        T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------------
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  T  Y  Y  C  A  R  H  S  V  S  S 
                    Query_13516  181  ACGTCCAAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGAGCGCCGCAGACACGGCTACGTATTACTGTGCGAGACATTCTGTGAGCAGT  270
V  93.8% (241/257)  IGHV4-39*01  223  ........................................C................GT..................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  92.3% (12/13)    IGHD6-19*01  7    ------------------------------------------------------------------------------------......  12

                                      --------CDR3-IMGT--------------------------->                                  
                                       A  W  S  F  G  P  P  P  R  L  Y  Y  L  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13516  271  GCCTGGTCGTTTGGTCCCCCCCCACGACTCTACTACCTCGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  349
D  92.3% (12/13)    IGHD6-19*01  13   .G.....------------------------------------------------------------------------  19
J  93.8% (45/48)    IGHJ4*02     1    -------------------------------.....T.T....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_130839

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD3-16*02                                                                                           12.2    32   
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGT	TCGTTA	CCCAATCTTGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGTTCGTTACCCAATCTTGGCTACTACTACGGTATGGACGTC	ARDRSLPNLGYYYGMDV	238	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  M  G  L  E 
                    Query_13517  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGATGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   ...............................G.........T...........................C.........A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  H  I  Y  Y  S  G  T  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_13517  91   TGGATTGGGCATATCTATTACAGTGGGACCACCAGTTACAATCCTTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAT  180
V  93.5% (229/245)  IGHV4-59*01  139  .........T..................G.....AC.....C..C...........................G................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------CDR3-IMGT---
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  S  L  P  N  L  G  Y 
                    Query_13517  181  CAGTTCTCCCTGAAGCTGAATTCCGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGATCGTTCGTTACCCAATCTTGGCTAC  270
V  93.5% (229/245)  IGHV4-59*01  229  ...................GC..T.......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*02  28   ---------------------------------------------------------------------......---------------  33
J  96.4% (53/55)    IGHJ6*02     8    --------------------------------------------------------------------------------------....  11

                                      ----------------->                                 
                                       Y  Y  G  M  D  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_13517  271  TACTACGGTATGGACGTCTGGGGCCAAGGGGCCACCGTCACCGTCTCCTCA  321
J  96.4% (53/55)    IGHJ6*02     12   ..............................A....G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_48539

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           352     3e-99
IGHD2-15*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CTGG	TTGCAGTGGTGGTAGCTGCT	N/A	ACTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCTGGTTGCAGTGGTGGTAGCTGCTACTATTTTGACTAC	AKAGCSGGSCYYFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13518  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.2% (237/249)  IGHV3-23*01  47   .........................................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  I  I  F  G  N  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13518  91   AGTGGGTCTCAATTATTTTTGGAAATGGTGGTACCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCTAGAGACAATGCCA  180
V  95.2% (237/249)  IGHV3-23*01  137  ...........GC....AG...T.G........G..........................................C.........T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  T  L  D  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  G  C  S  G  G  S  
                    Query_13518  181  GGAACACGCTGGATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGCTGGTTGCAGTGGTGGTAGCT  270
V  95.2% (237/249)  IGHV3-23*01  227  A..........T.........................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  95.0% (19/20)    IGHD2-15*01  7    -------------------------------------------------------------------------...T.............  23

                                      ---------------->                                  
                                      C  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13518  271  GCTACTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  95.0% (19/20)    IGHD2-15*01  24   ...------------------------------------------------  26
J  97.9% (47/48)    IGHJ4*02     1    ---....C...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_228731

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            339     2e-95
IGHD3-10*01                                                                                           16.1    2.2  
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGATGAA	TCGGGGAG	GCCC	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGATGAATCGGGGAGGCCCCTATTATTACTACGGCATGGACGTC	ARVMNRGGPYYYYGMDV	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  L  S  S  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_13519  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCGCCCTTAGTAGTTACTGGATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-7*03   47   ...............................A...A..T.......C..T.......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  E  K  H  Y  V  D  S  V  Q  G  R  F  T  V  S  R  D  N  A  
                    Query_13519  91   AGTGGGTGGCCAACATAAAGGAAGATGGAAGTGAGAAACACTATGTGGACTCTGTGCAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  93.6% (233/249)  IGHV3-7*03   137  ....................C.................T.................A..............A..................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  I  L  Q  M  S  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  V  M  N  R  G  G  P  
                    Query_13519  181  AGAATTCACTGATTCTGCAAATGAGTAGCCTGAGAGGCGAGGACACGGCCGTGTATTACTGTGCGAGAGTGATGAATCGGGGAGGCCCCT  270
V  93.6% (233/249)  IGHV3-7*03   227  ....C......TA...........AC..........C................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-10*01  14   ----------------------------------------------------------------------------........------  21
J  94.8% (55/58)    IGHJ6*02     5    ----------------------------------------------------------------------------------------..  6

                                      GT-------------------->                                 
                                      Y  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13519  271  ATTATTACTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  94.8% (55/58)    IGHJ6*02     7    .C..C........T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_228730

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           336     1e-94
IGHD1-26*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GGG	GGGAGCTACT	CTCCTTTT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGGGGGGAGCTACTCTCCTTTTTGCTTTTGATATC	VKGGATLLFAFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  N  M  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13520  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAATATGTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTAG  90
V  93.5% (231/247)  IGHV3-64*05  47   ..........................................G..GC.........................................G.  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  V  S  S  I  T  S  N  A  E  S  T  Y  Y  T  D  S  V  K  D  R  F  T  I  S  R  D  N  S  
                    Query_13520  91   AATCTGTCTCCTCTATTACTAGTAATGCGGAGAGCACATACTACACAGACTCAGTGAAGGACAGATTCACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-64*05  137  ...A...T..AG......G........G..GT............G...............G.............................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A  V  Y  Y  C  V  K  G  G  A  T  L  L  F  
                    Query_13520  181  AGAACACGCTGTATCTTCAAATGAGCAGTCTGAGACCTGAGGACACGGCTGTGTATTACTGTGTGAAGGGGGGAGCTACTCTCCTTTTTG  270
V  93.5% (231/247)  IGHV3-64*05  227  ..............G....................G...............................-----------------------  293
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V                          
D  100.0% (10/10)   IGHD1-26*01  9    ----------------------------------------------------------------------..........----------  18
J  97.9% (46/47)    IGHJ3*02     4    ----------------------------------------------------------------------------------------..  5

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_13520  271  CTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  315
J  97.9% (46/47)    IGHJ3*02     6    ..........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_228732

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           299     3e-83
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	223	22	6	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_13521  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.8% (223/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_13521  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.8% (223/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_13521  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTACTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.8% (223/251)  IGHV4-34*01  223  ....................GC............C....................................-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_13521  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_228735

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            403     9e-115
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGAG	N/A	N/A	GTCTGCGGAG	TGCTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGGTCTGCGGAGTGCTCTTGATATC	ARGLRSALDI	269	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	42	3	0	93.3
CDR1-IMGT	47	76	30	26	4	0	86.7
FR2-IMGT	77	127	51	51	0	0	100
CDR2-IMGT	128	154	27	27	0	0	100
FR3-IMGT	155	268	114	113	1	0	99.1
CDR3-IMGT (germline)	269	275	7	7	0	0	100
Total	N/A	N/A	274	266	8	0	97.1


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  A  I  S  G  D  S  F  S  N  N  D  A  A  W  N  W  I  R 
                    Query_13522  2    CTGGTGAAACCCACACAGACCCTCTCACTCACCTGTGCCATCTCCGGGGACAGTTTCTCTAACAACGATGCTGCTTGGAACTGGATCAGG  91
V  97.1% (266/274)  IGHV6-1*01   31   ........G...T.G.......................................G......G....AG......................  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 
                    Query_13522  92   CAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAGGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAAAGTCGA  181
V  97.1% (266/274)  IGHV6-1*01   121  ..........................................................................................  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       I  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 
                    Query_13522  182  ATAACCATCGACCCAGACACATCCAAGAACCAGTTCTCCCTGCAGCTGAACTCTGTGACTCCCGAGGACACGGCTGTGTATTACTGTGCA  271
V  97.1% (266/274)  IGHV6-1*01   211  .........A................................................................................  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      --------CDR3-IMGT--------->                                  
                                       R  G  L  R  S  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13522  272  AGAGGTCTGCGGAGTGCTCTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  332
V  97.1% (266/274)  IGHV6-1*01   301  ....---------------------------------------------------------  304
                                       R                                                           
J  97.9% (46/47)    IGHJ3*02     4    --------------....T..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_228734

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           310     1e-86
IGHD3-3*01                                                                                            10.3    119  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGACACAG	TTTTT	AGTTTCCAC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACACAGTTTTTAGTTTCCACTTCGACCCC	ARVDTVFSFHFDP	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  F  F  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_13523  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGCGGTAGTTTCTTTTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  89.6% (224/250)  IGHV4-61*01  49   .........................................C..T.......A..AC....G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  A  Y  I  S  Y  S  G  R  T  K  S  N  P  S  L  K  S  R  V  T  M  S  I  D  T  S 
                    Query_13523  91   CTGGAATGGCTTGCCTATATCTCTTACAGTGGGAGAACCAAGTCTAATCCCTCTCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCC  180
V  89.6% (224/250)  IGHV4-61*01  139  .....G...A...GG.......A............C.....C.AC..C.....C....................A...G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  V  D  T  V  F  S  F 
                    Query_13523  181  AAGAACCAATTCTCCCTGAGGCTGACTTCCGTGACCGCTGCGGACACGGCCGTTTATTTCTGTGCGAGAGTGGACACAGTTTTTAGTTTC  270
V  89.6% (224/250)  IGHV4-61*01  229  ........G..........A.....GC..T.......................G....A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-3*01   10   -------------------------------------------------------------------------------.....------  14

                                      ----------->                                  
                                       H  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13523  271  CACTTCGACCCCTGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ5*02     9    ---.......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_228737

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           350     8e-99
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCGAGA	TCGGGGA	AG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGAGATCGGGGAAGACTACTTTAACTAC	ARAEIGEDYFNY	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  N  W  I  R  Q  L  P  G  K  G 
                    Query_13524  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAACTGGATCCGCCAGCTCCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*03  49   .............................................................G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  N  Y  Y  S  G  S  S  Y  F  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_13524  91   CTGGAGTGGATTGGCTACAACTATTATAGTGGGAGCTCCTACTTCAACCCGTCCCTCAAAAGTCGAGTTACCATATCATTAGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*03  139  ..............G....T......C.........A......A...............G..................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  E  I  G  E  D  Y 
                    Query_13524  181  AAGAACCAGTTCTCCCTGCAGCTCAGCTCTGTGACTGCCGCGGACTCGGCCGTTTATTACTGTGCGAGAGCCGAGATCGGGGAAGACTAC  270
V  94.8% (237/250)  IGHV4-31*03  229  ..................A....G.....................A.......G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-10*01  14   ----------------------------------------------------------------------------.......-------  20
J  95.8% (46/48)    IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  N  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_13524  271  TTTAACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  313
J  95.8% (46/48)    IGHJ4*02     6    ...G.................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_228736

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD7-27*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	ACTGGGGA	GGCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC	ARGLGRRWFDP	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  N  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13525  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTGGTAACTACTGGAATTGGATCCGGCAGCCCCCAGGCAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ......................................C...A..T.........GC....................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  T  G  S  T  N  Y  T  H  S  L  E  S  R  V  T  I  S  A  D  P  S  K  N 
                    Query_13525  91   TGGATTGGCTATCTCTATTACACTGGGAGCACCAACTACACCCACTCCCTCGAGAGTCGAGTCACCATATCAGCGGACCCGTCCAAGAAT  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G...A.........G.................A..C.......A.....................TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  M  R  S  V  T  A  A  D  T  A  I  Y  F  C  A  R  G  L  G  R  R  W  F  D  P 
                    Query_13525  181  CAGTTCTCCCTCAAGATGAGGTCTGTGACCGCAGCGGACACGGCCATTTATTTCTGTGCGAGAGGACTGGGGAGGCGTTGGTTCGACCCC  270
V  90.6% (221/244)  IGHV4-59*01  229  ...........G...C....C...........T............G.G....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD7-27*01  4    -----------------------------------------------------------------........-----------------  11
J  95.7% (44/46)    IGHJ5*02     6    ------------------------------------------------------------------------------............  17

                                                                        
                                       W  G  Q  G  A  L  V  S  V  S  S  
                    Query_13525  271  TGGGGCCAGGGAGCCCTGGTCTCCGTCTCCTCAG  304
J  95.7% (44/46)    IGHJ5*02     18   ............A........A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_193509

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD3-16*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	TGGGGGA	TGGCGACAATTCTGACATTTCG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTC	TRVGDGDNSDISYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  I  F
                    Query_13526  1    GCAGCTGGTGCAGTCTGGTGCAGAGGTTAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTAGCATCTT  90
V  94.8% (274/289)  IGHV5-51*01  6    ..................A........G.................................................G.....C..G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  I  K  Y  S  P
                    Query_13526  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATATCAAATACAGTCC  180
V  94.8% (274/289)  IGHV5-51*01  96   ....................................................A........................C..G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  S  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13526  181  GTCCTTCCAAGGCCAGGTCTCCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTTTGAAGGCCTCGGACACCGC  270
V  94.8% (274/289)  IGHV5-51*01  186  ...................A.................................................CC...................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  T  R  V  G  D  G  D  N  S  D  I  S  Y  G  M  D  V  W  G  Q  G  T  K  V  T  V
                    Query_13526  271  CATCTATTACTGTACGAGAGTGGGGGATGGCGACAATTCTGACATTTCGTACGGCATGGACGTCTGGGGCCAAGGGACCAAGGTCACCGT  360
V  94.8% (274/289)  IGHV5-51*01  276  ...G.........G.....-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD3-16*01  17   --------------------.......---------------------------------------------------------------  23
J  95.8% (46/48)    IGHJ6*02     15   -------------------------------------------------.....T.........................C.........  55

                                             
                                        S  S 
                    Query_13526  361  CTCCTCA  367
J  95.8% (46/48)    IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_120422

Length=371
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	274	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_13527  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  95.1% (274/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_13527  91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  95.1% (274/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_13527  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  95.1% (274/288)  IGHV5-51*01  186  ...............G.........................T.........................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13527  271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  95.1% (274/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36323304


Query= Query_193501

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           318     6e-89
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGGGGGATG	AGTGGCTGGT	GATGGCCC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGGGATGAGTGGCTGGTGATGGCCCAC	ARGGG*VAGDGP	243	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  G  N  F  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13528  1    GGTCCCTGAGACTCTCCTGTGAAGCGTCTGGATTCACGTTTGGGAACTTTGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-33*01  47   .....................C...............C..CA.T.G..A.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  F  Y  D  G  R  I  K  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13528  91   AGTGGGTGGCAGTTATCTTTTATGATGGACGTATTAAAGACTATGCAGACTCCGTGAAGGGCCGCTTCACCATTTCCAGAGACAACTCCA  180
V  90.8% (226/249)  IGHV3-33*01  137  ................A.GG.........A...A....T.........................A........C...........T....  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  M  V  F  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  R  G  G  G  *  V  A  G  
                    Query_13528  181  AGAATATGGTGTTCCTGCAAATGAACAGCCTGAGAGACGAGGACACGGCTGTATATTACTGTGCGAGAGGGGGGGGATGAGTGGCTGGTG  270
V  90.8% (226/249)  IGHV3-33*01  227  ....C.C.C...AT......................C...............G................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (10/10)   IGHD6-19*01  10   -------------------------------------------------------------------------------..........-  19

                                      -------->                                  
                                      D  G  P  L  G  P  G  T  P  G  H  R  L  L   
                    Query_13528  271  ATGGCCCACTGGGGCCAGGGACCCCTGGTCACCGTCTCCTCAG  313
J  97.2% (35/36)    IGHJ4*02     13   -------..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_193500

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD3-16*01                                                                                           14.1    7.9  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAG	ATTATGA	CATTGGCTGGAG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGATTATGACATTGGCTGGAGC	ARGDYDIGWS	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  T  H  Y  W  S  W  I  R  Q  P  P  G  N  G  L  E 
                    Query_13529  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTACTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAACGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*01  49   .......................................AG..G.T..................................G.........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  T  I  T  Y  N  P  S  L  K  S  R  V  A  I  S  V  D  R  S  N  N 
                    Query_13529  91   TGGATTGGATATATCTATTACAGTGGGACCATCACCTACAACCCCTCCCTCAAGAGTCGAGTCGCCATATCAGTAGACAGGTCCAACAAC  180
V  93.0% (227/244)  IGHV4-59*01  139  ........G...................G..C..A............................A...............C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       R  F  S  L  K  V  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  D  Y  D  I  G  W  S  W 
                    Query_13529  181  CGCTTCTCCCTGAAGGTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGGAGATTATGACATTGGCTGGAGCTGG  270
V  93.0% (227/244)  IGHV4-59*01  229  .AG............C...............................G.....C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-16*01  3    -------------------------------------------------------------------.......----------------  9
J  100.0% (35/35)   IGHJ4*02     14   --------------------------------------------------------------------------------------....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_13529  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  100.0% (35/35)   IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_193503

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           310     1e-86
IGHD1-26*01                                                                                           12.2    31   
IGHJ3*01                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAAGGGTATCGCTGT	TATAGT	A	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAAGGGTATCGCTGTTATAGTAGATGCTTTTGATTTC	ARAKGIAVIVDAFDF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	98	16	0	86
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	221	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  T  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13530  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCACTAGTTACTACTGGAGCTGGATCCGGCAGTCCCCGGGGAAGGGACTGGAG  90
V  90.6% (221/244)  IGHV4-59*01  49   ..................A.....................G............................C....A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  T  T  T  Y  N  P  S  F  K  S  R  V  T  V  S  V  D  M  S  N  N 
                    Query_13530  91   TGGATTGGATATATCTATTACAGAGGGACCACCACCTACAATCCCTCTTTCAAGAGTCGAGTCACTGTGTCAGTAGACATGTCCAACAAC  180
V  90.6% (221/244)  IGHV4-59*01  139  ........G..............T....G.....A......C.....CC................CA.A..........C......G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       R  F  S  L  S  L  S  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  A  K  G  I  A  V  I  V  D 
                    Query_13530  181  CGGTTCTCCCTGAGTCTGAGCTCTGTGACCGCCGCGGACAGTGCCGTCTATTACTGTGCGAGAGCTAAGGGTATCGCTGTTATAGTAGAT  270
V  90.6% (221/244)  IGHV4-59*01  229  .A...........AG.................T.......CG.....G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------------......----  8
J  91.8% (45/49)    IGHJ3*01     2    ---------------------------------------------------------------------------------------...  4

                                      ----------->                                  
                                       A  F  D  F  W  G  P  G  R  M  V  T  V  S  T  
                    Query_13530  271  GCTTTTGATTTCTGGGGCCCAGGGAGAATGGTCACCGTCTCTACAG  316
J  91.8% (45/49)    IGHJ3*01     5    .........G.........A.....C................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_175151

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           417     6e-119
IGHD2-2*01                                                                                            21.8    0.047 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAGTAGTGAA	TACCAGCTGCT	GTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCC	ARSSSEYQLLFWFDP	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	280	13	0	95.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_13531  4    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCA  93
V  95.6% (280/293)  IGHV5-51*03  2    ....G........G.......................................................G............C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  
                    Query_13531  94   GCTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAGGGCCTGGAGTGGATGGGGATCATATATCCTGGTGACTCTGATGCCAGATATA  183
V  95.6% (280/293)  IGHV5-51*03  92   .....................................A.......................C..................A.......C.  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  K  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_13531  184  GTCCGTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTCAAGGCCTCGGACA  273
V  95.6% (280/293)  IGHV5-51*03  182  .C.........C.....................C..........................................G.............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  Y  C  A  R  S  S  S  E  Y  Q  L  L  F  W  F  D  P  W  G  Q  G  T  L  V  T  V  
                    Query_13531  274  CCGCCATGTATTATTGTGCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCA  363
V  95.6% (280/293)  IGHV5-51*03  272  .............C.........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (11/11)   IGHD2-2*01   16   -----------------------------------...........--------------------------------------------  26
J  97.9% (46/47)    IGHJ5*02     5    -------------------------------------------------........................................T  45

                                            
                                      T  S  
                    Query_13531  364  CCTCAG  369
J  97.9% (46/47)    IGHJ5*02     46   ......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_193505

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           366     2e-103
IGHD6-13*01                                                                                           25.7    0.003 
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	ACATCGGGG	TAGCAGCAACTGGTAC	CCAGAGTT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGAACATCGGGGTAGCAGCAACTGGTACCCAGAGTTTGATGCTTTTCATATT	ATEHRGSSNWYPEFDAFHI	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  V  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13532  1    GGTCCCTGAGACTCTCCTGTGAAGTCTCTGGATTCACCTTTAGCAGCTATTCCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-23*01  47   .....................C..C.........................G......G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  S  G  S  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13532  91   AGTGGGTCTCAGCTATTAGTGGTAGTGGTAGTAGCACATACTACGCAGACTCCGTGAAGGGTCGGTTCACCATCTCCAGAGACAATTCCA  180
V  96.8% (242/250)  IGHV3-23*01  137  .............................G...............................C............................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  T  E  H  R  G  S  S  N  
                    Query_13532  181  AGAACACGCTGCATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGACAGAACATCGGGGTAGCAGCAACT  270
V  96.8% (242/250)  IGHV3-23*01  227  ...........T......................................................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  93.8% (15/16)    IGHD6-13*01  6    -------------------------------------------------------------------------------........G..  16

                                      -IMGT----------------------->                                  
                                      W  Y  P  E  F  D  A  F  H  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13532  271  GGTACCCAGAGTTTGATGCTTTTCATATTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  333
D  93.8% (15/16)    IGHD6-13*01  17   .....----------------------------------------------------------  21
J  96.0% (48/50)    IGHJ3*02     1    -------------..........G....C..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_193504

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           450     9e-129
IGHD5-18*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD5-18*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTATCCTC	TACAGCTATGG	GGAAGATGGA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTATCCTCTACAGCTATGGGGAAGATGGATACGGTATGGACGTC	ARGILYSYGEDGYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	114	0	0	100
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	289	1	0	99.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_13533  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGCAGCTA  90
V  99.7% (289/290)  IGHV1-69*01  6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q
                    Query_13533  91   TGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGTACAGCAAACTACGCACA  180
V  99.7% (289/290)  IGHV1-69*01  96   ..........................................................................................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_13533  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  99.7% (289/290)  IGHV1-69*01  186  ..........................................................................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        V  Y  Y  C  A  R  G  I  L  Y  S  Y  G  E  D  G  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V
                    Query_13533  271  CGTGTATTACTGTGCGAGAGGTATCCTCTACAGCTATGGGGAAGATGGATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGT  360
V  99.7% (289/290)  IGHV1-69*01  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (11/11)   IGHD5-18*01  6    ----------------------------...........---------------------------------------------------  16
J  100.0% (48/48)   IGHJ6*02     15   -------------------------------------------------.........................................  55

                                             
                                        S  S 
                    Query_13533  361  CTCCTCA  367
J  100.0% (48/48)   IGHJ6*02     56   .......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_193507

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           369     2e-104
IGHD2-2*01                                                                                            23.8    0.011 
IGHJ6*02                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TAAG	TTGTAGTAGTAACACCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTAAGTTGTAGTAGTAACACCTGCTACTACGAAATGGACGTC	ARVSCSSNTCYYEMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	240	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13534  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  98.4% (240/244)  IGHV4-59*01  49   ...............................G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13534  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGGTAGACACGTCCAAGAAC  180
V  98.4% (240/244)  IGHV4-59*01  139  .......................................................................A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  C  S  S  N  T  C  Y 
                    Query_13534  181  CAGTTCTCCCTGAAGCTGAGCTCCGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGTAAGTTGTAGTAGTAACACCTGCTAC  270
V  98.4% (240/244)  IGHV4-59*01  229  .......................T.......................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (16/18)    IGHD2-2*01   7    --------------------------------------------------------------------...........C..G...----  24
J  96.2% (50/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13534  271  TACGAAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  96.2% (50/52)    IGHJ6*02     15   ....GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_345496

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*02                                                                                           349     2e-98
IGHD3-16*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCT	TTACGTTTGGGGGAGCTATG	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTTTACGTTTGGGGGAGCTATGGACTACTTTGACTAC	ARGLFTFGGAMDYFDY	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	236	13	0	94.8


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  V  A  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  
                    Query_13535  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGTCGCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCC  93
V  94.8% (236/249)  IGHV4-31*02  50   .....TCC...A..................G.T..........................................A..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  R  G  S  T  Y  S  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_13535  94   TGGAGTGGATTGGGTACATCTATTACCGTGGGAGCACGTACTCCAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  94.8% (236/249)  IGHV4-31*02  140  ..........................A..........C....A...............................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  L  S  V  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  F  T  F  G  G  
                    Query_13535  184  AGAACCAGTTGTCCGTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTATTGTGCGAGAGGCCTCTTTACGTTTGGGGGAG  273
V  94.8% (236/249)  IGHV4-31*02  230  ..........C...C...........................................C..........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  95.0% (19/20)    IGHD3-16*01  10   ---------------------------------------------------------------------------...............  24

                                      T------------------>                                  
                                      A  M  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13535  274  CTATGGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  95.0% (19/20)    IGHD3-16*01  25   T....-------------------------------------------------  29
J  100.0% (48/48)   IGHJ4*02     1    ------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_345497

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           336     2e-94
IGHD3-3*01                                                                                            21.8    0.047
IGHJ4*02                                                                                              58.4    1e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-3*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGTGGA	TTTTGGAGTGG	AGGACTCTGGAGTGGTCCGCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGGATTTTGGAGTGGAGGACTCTGGAGTGGTCCGCCTTGACTAC	ARVDFGVEDSGVVRLDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	93	21	0	81.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	251	36	0	87.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  T  S  G  Y  P  F  R  N  Y 
                    Query_13536  2    CAGCTGGTGCAGTCTGGAGCTGAGGTTAAGAAGCCTGGCGCCTCAGTGAAGGTCGCCTGCAAGACTTCTGGTTACCCCTTTAGGAATTAC  91
V  87.5% (251/287)  IGHV1-18*04  7    ..........................G...........G...............T........G...........A......CC.GC...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  V  G  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  E 
                    Query_13536  92   GGTGTCGGTTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGATGGATCAGCGGTTACAATGGGAACACAAACTATGCAGAG  181
V  87.5% (251/287)  IGHV1-18*04  97   ...A..A.C..........................G.........................C.........T...............C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  F  E  D  R  V  T  M  I  T  H  T  S  T  T  T  V  F  M  E  L  R  G  L  *  Y  D  D  S  A 
                    Query_13536  182  AATTTCGAGGACAGAGTCACAATGATCACACACACCTCCACGACCACAGTGTTCATGGAACTGAGGGGGCTGTGATATGACGACTCGGCC  271
V  87.5% (251/287)  IGHV1-18*04  187  ..GC..C...G.........C....C....G....A.......G.....CC.A......G......A.C...A...C.......A.....  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------CDR3-IMGT-------------------->                           
                                       V  F  Y  C  A  R  V  D  F  G  V  E  D  S  G  V  V  R  L  D  Y  W  G  Q  G  A  L  V  S  F 
                    Query_13536  272  GTTTTTTACTGTGCGAGGGTGGATTTTGGAGTGGAGGACTCTGGAGTGGTCCGCCTTGACTACTGGGGCCAGGGAGCCCTGGTCAGCTTC  361
V  87.5% (251/287)  IGHV1-18*04  277  ..G.A............-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  100.0% (11/11)   IGHD3-3*01   11   -----------------------...........--------------------------------------------------------  21
J  90.5% (38/42)    IGHJ4*02     7    -------------------------------------------------------....................A.........C.G..  41

                                             
                                       S  S  
                    Query_13536  362  TCGTCAG  368
J  90.5% (38/42)    IGHJ4*02     42   ..C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_345494

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            347     7e-98
IGHD1-26*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTT	GTATAGTGGGAGCTAC	GGGGGAGAGGACTGG	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGTATAGTGGGAGCTACGGGGGAGAGGACTGG	ARDLYSGSYGGEDW	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	24	19	2	3	79.2
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	250	238	9	3	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13537  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATTGGATGAGCTGGGTCCGCCAGGCTCCCGGGAAGGGGCTGG  90
V  95.2% (238/250)  IGHV3-7*01   47   .............................................G..............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  T  E     Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  D  A  
                    Query_13537  91   AGTGGGTGGCCAACATAAAGCAGGATGGAACTGAG---TACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACGACGCCA  177
V  95.2% (238/250)  IGHV3-7*01   137  ......................A.......G....AAA.............................................A......  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  L  M  Y  L  Q  M  N  S  L  E  A  E  D  T  A  V  Y  Y  C  A  R  D  L  Y  S  G  S  Y  
                    Query_13537  178  AGAACTTAATGTATCTGCAAATGAACAGCCTGGAAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGTATAGTGGGAGCTACG  267
V  95.2% (238/250)  IGHV3-7*01   227  ......C.C.......................AG....................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (16/16)   IGHD1-26*01  2    -------------------------------------------------------------------------................-  17

                                      ------------->                                  
                                      G  G  E  D  W  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13537  268  GGGGAGAGGACTGGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (34/34)   IGHJ4*02     15   --------------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_345495

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            341     6e-96
IGHD3-10*01                                                                                           23.8    0.011
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGACACTCACCG	ATTACTTTGGCTCGGGGA	ACTATAT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGACACTCACCGATTACTTTGGCTCGGGGAACTATATTACTACTACGGTTTGGATGTC	ARDDTHRLLWLGELYYYYGLDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13538  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-7*03   47   ...........................................T.G....TGG.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  F  H  A  D  S  V  K  G  R  F  T  I  F  R  D  N  A  
                    Query_13538  91   AGTGGGTGGCCAACATAAAACAAGATGGAAGTGAGAAATTTCATGCGGACTCTGTGAAGGGCCGATTCACCATCTTCAGAGACAACGCCA  180
V  93.6% (234/250)  IGHV3-7*03   137  ...................G...................ACT...T.............................C..............  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  S  V  Y  L  Q  M  Y  G  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  D  T  H  R  L  L  
                    Query_13538  181  AGAACTCAGTGTATCTGCAAATGTACGGCCTGAGAGCCGAAGACACGGCCGTCTATTACTGTGCGAGAGATGACACTCACCGATTACTTT  270
V  93.6% (234/250)  IGHV3-7*03   227  ........C..............A..A.............G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (16/18)    IGHD3-10*01  3    ----------------------------------------------------------------------------------......A.  10

                                      -CDR3-IMGT--------------------------->                                 
                                      W  L  G  E  L  Y  Y  Y  Y  G  L  D  V  W  G  R  G  T  T  V  T  V  S  S 
                    Query_13538  271  GGCTCGGGGAACTATATTACTACTACGGTTTGGATGTCTGGGGCCGAGGGACCACGGTCACCGTCTCCTCA  341
D  88.9% (16/18)    IGHD3-10*01  11   ..T.......-------------------------------------------------------------  20
J  94.4% (51/54)    IGHJ6*02     9    -----------------............A....C..........A.........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_345492

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD6-13*01                                                                                           12.2    32   
IGHJ5*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCGCCGACG	GCAGCA	CCACCTTCTTCTTCCCCG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCGCCGACGGCAGCACCACCTTCTTCTTCCCCGACTGGTTCGACCCC	ARTADGSTTFFFPDWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  I  S  G  G  S  I  N  K  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13539  1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGGCTCCATCAATAAATACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAG  90
V  94.7% (230/243)  IGHV4-59*01  49   .....................G..................G..GT...........C.............................G...  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  R  S  K  N 
                    Query_13539  91   TGGATAGGCTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACAGGTCCAAGAAC  180
V  94.7% (230/243)  IGHV4-59*01  139  .....T..G...............................................................G......C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  V  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  A  D  G  S  T  T  F  F 
                    Query_13539  181  CAGGTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAACCGCCGACGGCAGCACCACCTTCTTC  270
V  94.7% (230/243)  IGHV4-59*01  229  ...T.........A.................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-13*01  8    -------------------------------------------------------------------------......-----------  13

                                      -------------------->                                  
                                       F  P  D  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13539  271  TTCCCCGACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ5*02     4    -------................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_345490

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            349     2e-98
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              96.8    2e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAAGACTGCGGC	AGTGGTTATT	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTTCGGTATGGACGTC	AREKTAAVVIDYYYFGMDV	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	21	3	0	87.5
FR2-IMGT	49	99	51	50	1	0	98
CDR2-IMGT	100	123	24	24	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	233	228	5	0	97.9


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  R  R  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 
                    Query_13540  13   TGTGCAGCCTCTGGATTCACGTTTAGAAGGTATTGGATGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGGAGTGGGTGGCCAACATA  102
V  97.9% (228/233)  IGHV3-7*01   64   ....................C.....T..C....................C.......................................  153
                                       C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  N  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  S  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_13540  103  AAGCAAGATGGAAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATCCACCATCTCCAGAGACAACGCCAAGAACTCACTGTATCTG  192
V  97.9% (228/233)  IGHV3-7*01   154  .................................................T........................................  243
                                       K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-----------------------CDR3-IMGT------------
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  E  K  T  A  A  V  V  I  D  Y  Y  Y  F 
                    Query_13540  193  CAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGAGAAGACTGCGGCAGTGGTTATTGACTACTATTATTTC  282
V  97.9% (228/233)  IGHV3-7*01   244  .....................................................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------..........---------------  26
J  94.9% (56/59)    IGHJ6*02     4    ----------------------------------------------------------------------------.......C..C.A.  17

                                      ----------->                                 
                                       G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13540  283  GGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  327
J  94.9% (56/59)    IGHJ6*02     18   .............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_345491

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           307     1e-85
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	N/A	N/A	GTCTCCCGGAGACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGAGTCTCCCGGAGACGACTACAACGGTATGGACGTC	VKESPGDDYNGMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  Y  Y  T  M  Y  W  V  R  Q  V  P  G  R  G  L  
                    Query_13541  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATTATTACACCATGTACTGGGTCCGTCAAGTTCCGGGGAGGGGTCTGG  90
V  89.2% (223/250)  IGHV3-43*01  47   ............................................G....T......C...............C........A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  I  S  W  D  G  E  T  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  T  S  
                    Query_13541  91   AGTGGGTCTCTCTTATTAGTTGGGATGGTGAGACTACAGACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACACCTCCA  180
V  89.2% (223/250)  IGHV3-43*01  137  ..............................GT.GC...T.............................................A.AG..  226
                                      E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  T  Y  Y  C  V  K  E  S  P  G  D  D  Y  
                    Query_13541  181  AGAATACGCTGTATCTGCAAATGAACAGCCTAAGAGCTGAGGACACGGCTACATATTACTGTGTGAAAGAGTCTCCCGGAGACGACTACA  270
V  89.2% (223/250)  IGHV3-43*01  227  .A..CT.C....................T..G...A..........C..CTTG..........CA.....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A  K                       
J  96.2% (51/53)    IGHJ6*02     10   ------------------------------------------------------------------------------------.....T  15

                                      ------------->                                 
                                      N  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13541  271  ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  317
J  96.2% (51/53)    IGHJ6*02     16   ...........................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_71748

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           369     2e-104
IGHD6-19*01                                                                                           18.0    0.58  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCA	AGTGGCTGG	CAAAGAGACTTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAAGTGGCTGGCAAAGAGACTTTCTTTGACTAC	ARDQVAGKETFFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	113	1	0	99.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_13542  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (243/250)  IGHV3-21*01  47   ........................................................A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  S  D  S  A  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13542  91   AGTGGGTCTCAGCCATTAGTAGTGATAGTGCTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  97.2% (243/250)  IGHV3-21*01  137  ...........T...........AG....AG...........................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  D  Q  V  A  G  K  E  
                    Query_13542  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGCGAGAGATCAAGTGGCTGGCAAAGAGA  270
V  97.2% (243/250)  IGHV3-21*01  227  .........................................................A............--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-19*01  10   -------------------------------------------------------------------------.........--------  18

                                      ------------->                                  
                                      T  F  F  D  Y  W  G  Q  G  A  L  V  T  I  S  S  
                    Query_13542  271  CTTTCTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCATCTCCTCAG  318
J  95.5% (42/44)    IGHJ4*02     5    ----......................A...........G.........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_48558

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            383     1e-108
IGHD1-26*01                                                                                           12.2    36    
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGGGGGT	GGACCTACT	TATC	CGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCC	ARARGWTYLSDP	290	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	72	3	0	96
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	21	3	0	87.5
FR3-IMGT	176	289	114	100	14	0	87.7
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	270	25	0	91.5


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_13543  2    CAGGTCCAGCTTGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCCTCTGGATATACCTTCACC  91
V  91.5% (270/295)  IGHV1-8*01   1    .....G.....G...........................................................T........C.........  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  Y  D  I  N  W  V  R  Q  A  T  G  H  G  L  E  W  M  G  W  M  N  P  K  T  G  N  T  G  F 
                    Query_13543  92   ACTTATGATATCAACTGGGTGCGACAGGCCACTGGACATGGACTTGAGTGGATGGGGTGGATGAACCCTAAAACTGGAAACACAGGCTTT  181
V  91.5% (270/295)  IGHV1-8*01   91   .G....................................A..G..............A..............C.G...T..........A.  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  R  F  K  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  T  Y  G  D 
                    Query_13543  182  GCACAGAGATTCAAGGGCAGAGTCACCATGACCAGGAACACTTCCATCAGCACAGCCTACATGGAATTGAGCAGCCTGACATATGGAGAC  271
V  91.5% (270/295)  IGHV1-8*01   181  .......AG...C............................C.....A.................GC............G..C..AG...  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------CDR3-IMGT------------>                                 
                                       T  A  I  Y  Y  C  A  R  A  R  G  W  T  Y  L  S  D  P  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_13543  272  ACGGCCATATATTACTGTGCGAGAGCCCGGGGGTGGACCTACTTATCCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  358
V  91.5% (270/295)  IGHV1-8*01   271  ......G.G................--------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                
D  88.9% (8/9)      IGHD1-26*01  10   ----------------------------------...G.....--------------------------------------------  18
J  100.0% (40/40)   IGHJ5*02     11   -----------------------------------------------........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_48559

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD5-18*01                                                                                           23.8    0.010
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	TACAGCCATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACAGCCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	113	1	0	99.1
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	233	9	0	96.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  R  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E  
                    Query_13544  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGGAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAAAGACTGGAGT  93
V  96.3% (233/242)  IGHV4-59*01  50   .....TCC...A....C.......................T......................................GG.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_13544  94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  96.3% (233/242)  IGHV4-59*01  140  ..........................................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D  
                    Query_13544  184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCGGTGTATTACTGTGCGAGATACAGCCATGGTTACGGAGGAGTTGACT  273
V  96.3% (233/242)  IGHV4-59*01  230  ...........................................C..................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  93.3% (14/15)    IGHD5-18*01  6    --------------------------------------------------------------......T........-------------  20
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------------------------------------------......  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13544  274  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (42/42)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_345498

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           316     2e-88
IGHD3-9*01                                                                                            14.1    8.1  
IGHJ2*01                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTACGC	TTTTGAC	GGCA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTACGCTTTTGACGGCAACTGGTACTTCGATCTC	AREYAFDGNWYFDL	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	10	1	0	90.9
CDR1-IMGT	25	48	24	23	1	0	95.8
FR2-IMGT	49	99	51	49	2	0	96.1
CDR2-IMGT	100	123	24	21	3	0	87.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	232	217	15	0	93.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         T  A  S  G  F  T  F  S  S  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  
                    Query_13545  14   GTACAGCCTCTGGATTCACCTTTAGCAGCCATGCCATGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTTCAGCTATTA  103
V  93.5% (217/232)  IGHV3-23*01  65   ..G..........................T...................C.............................C..........  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      T  T  S  G  G  S  T  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  K  N  T  L  S  M  
                    Query_13545  104  CTACTAGTGGTGGTAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCAAGAACACGTTGTCTATGG  193
V  93.5% (217/232)  IGHV3-23*01  155  G.GG................T................................A..........................C...A.C..C  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      E  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  Y  A  F  D  G  N  W  Y  F  D  L  W  
                    Query_13545  194  AAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAGAGAGTACGCTTTTGACGGCAACTGGTACTTCGATCTCTGGG  283
V  93.5% (217/232)  IGHV3-23*01  245  ......................G.........................A...--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (7/7)     IGHD3-9*01   12   ----------------------------------------------------------.......-------------------------  18
J  100.0% (51/51)   IGHJ2*01     3    ---------------------------------------------------------------------.....................  23

                                                                    
                                      G  R  G  T  L  V  T  V  S  S  
                    Query_13545  284  GCCGTGGCACCCTGGTCACTGTCTCCTCAG  313
J  100.0% (51/51)   IGHJ2*01     24   ..............................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_345499

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           422     2e-120
IGHD2-15*01                                                                                           16.1    2.4   
IGHJ6*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	TAGGC	ATTGTAATGGT	AACAGGTGTTGGGG	CGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGATAGGCATTGTAATGGTAACAGGTGTTGGGGCGTC	AGDRHCNGNRCWGV	281	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	166	21	20	1	0	95.2
FR3-IMGT	167	280	114	111	3	0	97.4
CDR3-IMGT (germline)	281	288	8	7	1	0	87.5
Total	N/A	N/A	288	279	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  N  N
                    Query_13546  1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGATCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAACAA  90
V  96.9% (279/288)  IGHV3-53*01  6    ..........G...........................................................................G...  95
                                        Q  L  V  E  S  G  G  G  L  I  Q  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N

                                      ---><--------------------FR2-IMGT---------------------><-----CDR2-IMGT-----><-------------
                                        Y  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  L  I  Y  S  G  G  T  T  H  Y  A  D  S
                    Query_13546  91   CTACATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCACTTATTTATAGCGGTGGTACCACACACTACGCAGACTC  180
V  96.9% (279/288)  IGHV3-53*01  96   ........G...........................................G..................G....T.............  185
                                        Y  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S

                                      ---------------------------------------FR3-IMGT-------------------------------------------
                                        V  K  G  R  F  T  I  S  R  D  N  S  R  N  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V
                    Query_13546  181  CGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAGGAACACGCTGTATCTTCAAATGAACAGCCTGAGAGGCGAGGACACGGCCGT  270
V  96.9% (279/288)  IGHV3-53*01  186  ......................................A...................................C...............  275
                                        V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V

                                      ---------><----------------CDR3-IMGT--------------->                                 
                                        Y  Y  C  A  G  D  R  H  C  N  G  N  R  C  W  G  V  W  G  Q  G  A  T  V  T  V  S  S 
                    Query_13546  271  GTATTACTGTGCGGGAGATAGGCATTGTAATGGTAACAGGTGTTGGGGCGTCTGGGGCCAAGGGGCCACGGTCACCGTCTCCTCA  355
V  96.9% (279/288)  IGHV3-53*01  276  .............A....-------------------------------------------------------------------  293
                                        Y  Y  C  A  R                                                                      
D  90.9% (10/11)    IGHD2-15*01  6    -----------------------......G....---------------------------------------------------  16
J  97.3% (36/37)    IGHJ6*02     26   ------------------------------------------------................A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_13779

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            329     3e-92
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAT	GAAGGGAC	TTACTATGACAGTACTGGTAATTA	TCC	CTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATGAAGGGACTTACTATGACAGTACTGGTAATTATCCCTTGGACTAT	VRDEGTYYDSTGNYPLDY	237	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	11	1	0	91.7
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	111	3	0	97.4
CDR3-IMGT (germline)	237	245	9	7	2	0	77.8
Total	N/A	N/A	234	222	12	0	94.9


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  V  S  G  F  T  F  D  D  H  A  I  H  W  V  R  Q  V  P  G  K  G  L  E  W  V  S  G  I 
                    Query_13547  12   TGTGCAGTCTCTGGATTCACGTTTGATGATCATGCCATCCACTGGGTCCGGCAAGTTCCAGGGAAGGGCCTGGAGTGGGTCTCAGGTATT  101
V  94.9% (222/234)  IGHV3-9*01   64   .......C............C.........T.......G................C..................................  153
                                       C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  G  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  W  N  S  G  S  K  G  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 
                    Query_13547  102  AGTTGGAATAGTGGCAGCAAAGGCTATGCGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACTCCCTCTATCTG  191
V  94.9% (222/234)  IGHV3-9*01   154  ..............T....T....................A..........................................G......  243
                                       S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><----------------------CDR3-IMGT-------------
                                       Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  V  R  D  E  G  T  Y  Y  D  S  T  G  N  Y  P 
                    Query_13547  192  CAAATGAACAGTCTGAGAGTTGAGGACACGGCCTTGTATTACTGTGTAAGAGATGAAGGGACTTACTATGACAGTACTGGTAATTATCCC  281
V  94.9% (222/234)  IGHV3-9*01   244  ...................C..........................C..A....------------------------------------  297
                                       Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                                     
D  87.5% (21/24)    IGHD3-22*01  4    --------------------------------------------------------------.........T....G....T....----  27
J  93.2% (41/44)    IGHJ4*02     5    -----------------------------------------------------------------------------------------.  5

                                      -------->                                  
                                       L  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_13547  282  TTGGACTATTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  324
J  93.2% (41/44)    IGHJ4*02     6    ..T.....C......................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_123162

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           268     7e-74
IGHD3-10*01                                                                                           41.1    7e-08
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCCTCTA	TATTACTATGGTTCGGGGAACTATTAT	GATTTGATACTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCCTCTATATTACTATGGTTCGGGGAACTATTATGATTTGATACTTTTTGACTCC	ARVPLYYYGSGNYYDLILFDS	270	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	54	56	3	3	0	0	100
CDR1-IMGT	57	80	24	21	3	0	87.5
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	155	24	18	6	0	75
FR3-IMGT	156	269	114	103	11	0	90.4
CDR3-IMGT (germline)	270	276	7	7	0	0	100
Total	N/A	N/A	223	197	26	0	88.3


Alignments

                                      <F><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR2
                                       S  E  F  T  F  S  T  Y  N  M  A  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  H  N 
                    Query_13548  54   TCTGAATTCACCTTCAGTACCTATAACATGGCGTGGGTCCGTCAGGCTCCGGGGAAGGGGCTGGAGTGGGTCTCATCTATTAGTCATAAT  143
V  88.3% (197/223)  IGHV3-21*01  73   ....G..............G.....G....AAC........C........A..........................C......AG..G.  162
                                       S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  S  I  S  S  S 

                                      -IMGT------><----------------------------------------------------FR3-IMGT-----------------
                                       S  H  Y  I  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  A  L  Q  M  L 
                    Query_13548  144  AGTCATTACATCCATTACGCGGACTCAGTGAAGGGCCGATTCACCATCTCCCGAGACAACGCCAAGAACTCACTGGCTCTGCAGATGCTC  233
V  88.3% (197/223)  IGHV3-21*01  163  ...AG......AT.C.....A..............................A.......................TA......A...AA.  252
                                       S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N 

                                      -----------------------------------><--------------------------CDR3-IMGT------------------
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  P  L  Y  Y  Y  G  S  G  N  Y  Y  D  L  I  L 
                    Query_13548  234  AGCCTGAGAGCAGAGGACACGGCTGTCTATTACTGTGCGAGAGTCCCTCTATATTACTATGGTTCGGGGAACTATTATGATTTGATACTT  323
V  88.3% (197/223)  IGHV3-21*01  253  ...........C..............G................-----------------------------------------------  295
                                       S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                 
D  92.6% (25/27)    IGHD3-10*01  2    ---------------------------------------------------...................GT......------------  28

                                      -------->                                  
                                       F  D  S  W  G  Q  G  T  T  V  T  V  S  S  
                    Query_13548  324  TTTGACTCCTGGGGCCAGGGAACCACGGTCACCGTCTCCTCAG  366
J  93.0% (40/43)    IGHJ4*02     6    .......A................CT.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_306069

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           388     5e-110
IGHD4-17*01                                                                                           18.0    0.67  
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTGG	CTACGGTGA	GTCCGAGTAGTTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTGGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTCTGGACGTC	ARDLATVSPSSFYYGLDV	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	269	21	0	92.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  T  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_13549  2    CAGCTGGTGCAGTCTGGAACTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAT  91
V  92.8% (269/290)  IGHV1-18*01  7    ..................G....G.............................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  V  R  Q  A  P  G  Q  G  L  K  W  M  G  W  I  S  A  Y  N  G  D  T  N  Y  A  Q 
                    Query_13549  92   GGTATTACCTGGGTGCGGCAGGCCCCTGGACAGGGACTTAAGTGGATGGGATGGATCAGCGCTTATAATGGTGACACAAACTATGCACAG  181
V  92.8% (269/290)  IGHV1-18*01  97   .....C.G.........A..............A..G...G.........................C......A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       M  V  R  D  R  V  T  L  T  R  D  T  S  T  S  T  V  Y  M  E  V  R  S  L  R  V  D  D  T  A 
                    Query_13549  182  ATGGTCCGGGACAGAGTCACCTTGACCAGAGACACATCCACGAGCACAGTCTACATGGAGGTGAGGAGCCTGAGAGTTGACGACACGGCC  271
V  92.8% (269/290)  IGHV1-18*01  187  .A.C...A..G..........A......C....................C..........C..............TC.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------CDR3-IMGT--------------------->                        
                                       V  Y  Y  C  A  R  D  L  A  T  V  S  P  S  S  F  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T 
                    Query_13549  272  GTGTATTACTGTGCGAGAGATCTGGCTACGGTGAGTCCGAGTAGTTTCTACTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACC  361
V  92.8% (269/290)  IGHV1-18*01  277  ....................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (9/9)     IGHD4-17*01  4    -------------------------.........--------------------------------------------------------  12
J  98.1% (51/52)    IGHJ6*02     11   -----------------------------------------------..........A................................  53

                                               
                                       V  S  S 
                    Query_13549  362  GTCTCCTCA  370
J  98.1% (51/52)    IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_123163

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           420     7e-120
IGHD6-13*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	ARHRYLGPRQQATENDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	280	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  Q  G  S  G  Y  T  F  T  T  Y
                    Query_13550  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTACCACCTA  90
V  96.2% (280/291)  IGHV5-51*01  6    ..........................................G..................A...............G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  P  R  Y  S  P
                    Query_13550  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAGTCATCTATCCTGGTGACTCTGATCCCAGATACAGCCC  180
V  96.2% (280/291)  IGHV5-51*01  96   ........G..........................................GA.......................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13550  181  GTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACTTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (280/291)  IGHV5-51*01  186  ......................A................................C..........C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_13550  271  CATGTATTACTGTGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  96.2% (280/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-13*01  8    ---------------------------------------.......--------------------------------------------  14
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_13550  361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_65560

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD1-1*01                                                                                            14.1    8.2  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTACCCTA	AACTGGGACG	GACCTTCTGCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTACCCTAAACTGGGACGGACCTTCTGCTTTTGACCAC	ARLTLNWDGPSAFDH	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	223	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  D  P  M  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  R  L  E 
                    Query_13551  1    ACCCTGTCCCTCACCTGCGCTGTCTCCGGTGACCCCATGACTAGTTATTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGAGACTGGAG  90
V  91.8% (223/243)  IGHV4-59*01  49   ..................A.......T....G.T....C.G......C........C........................G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  R  S  R  V  T  L  S  I  D  T  S  K  N 
                    Query_13551  91   TGGATTGGATATATCTACTACAGTGGGAGCACCAACTACAACCCTTCCCTCAGGAGTCGAGTCACCTTATCGATAGACACGTCCAAGAAC  180
V  91.8% (223/243)  IGHV4-59*01  139  ........G........T..........................C.......A.............A....AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       H  F  S  L  S  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  L  T  L  N  W  D  G  P  S 
                    Query_13551  181  CACTTCTCCCTGAGCCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGACTTACCCTAAACTGGGACGGACCTTCT  270
V  91.8% (223/243)  IGHV4-59*01  229  ..G..........AG................................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (9/10)     IGHD1-1*01   6    ------------------------------------------------------------------------......A...--------  15

                                      ----------->                                  
                                       A  F  D  H  W  G  R  G  T  L  V  A  V  S  S  
                    Query_13551  271  GCTTTTGACCACTGGGGCCGGGGAACCCTGGTCGCCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---......T.........A.............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_65562

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           378     3e-107
IGHD6-13*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	G	GGGTATAGCAGCAGC	GGAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGTATAGCAGCAGCGGATTTTGACTAC	ARGGIAAADFDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	113	1	0	99.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	243	1	0	99.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13552  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  99.6% (243/244)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_13552  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  99.6% (243/244)  IGHV4-59*01  139  ........................................................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  I  A  A  A  D  F  D 
                    Query_13552  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGGGGGTATAGCAGCAGCGGATTTTGAC  270
V  99.6% (243/244)  IGHV4-59*01  229  ................................................................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (15/15)   IGHD6-13*01  1    -----------------------------------------------------------------...............----------  15
J  100.0% (43/43)   IGHJ4*02     6    ------------------------------------------------------------------------------------......  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13552  271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (43/43)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_152088

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            397     8e-113
IGHD6-19*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGTTCCGGTGG	TAGTAGTGGCTGGTAC	CAAC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGTTCCGGTGGTAGTAGTGGCTGGTACCAACTTGACTAC	ARGSGGSSGWYQLDY	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	70	4	0	94.6
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	23	1	0	95.8
FR3-IMGT	178	291	114	104	10	0	91.2
CDR3-IMGT (germline)	292	296	5	5	0	0	100
Total	N/A	N/A	292	273	19	0	93.5


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  M  V  S  C  K  A  S  G  Y  T  F  T  
                    Query_13553  5    AGGTCCAGCTGGTACAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGATGGTTTCCTGCAAGGCTTCTGGATACACCTTCACTA  94
V  93.5% (273/292)  IGHV1-3*01   2    ..........T..G........G...............................A...................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  A  I  H  W  V  R  Q  A  P  G  L  R  L  E  W  M  G  W  I  D  A  G  N  G  N  T  K  Y  
                    Query_13553  95   GTTATGCTATACATTGGGTGCGCCAGGCCCCCGGACTCAGGCTTGAGTGGATGGGATGGATCGACGCTGGCAATGGTAACACAAAATATT  184
V  93.5% (273/292)  IGHV1-3*01   92   .C........G.........................AA........................A...........................  181
                                      S  Y  A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  Q  N  F  Q  G  R  V  T  I  T  R  Y  T  S  A  S  T  A  Y  M  E  F  F  S  L  R  S  E  D  
                    Query_13553  185  CACAGAACTTCCAGGGCAGAGTCACCATTACCAGGTACACCTCCGCGAGCACAGCCTACATGGAGTTTTTCAGTCTGAGATCTGAGGACA  274
V  93.5% (273/292)  IGHV1-3*01   182  .......G...........................G....A........................C.GAG...C...........A....  271
                                      S  Q  K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  V  Y  Y  C  A  R  G  S  G  G  S  S  G  W  Y  Q  L  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_13553  275  CGGCTGTATATTACTGTGCGAGGGGTTCCGGTGGTAGTAGTGGCTGGTACCAACTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  364
V  93.5% (273/292)  IGHV1-3*01   272  .......G..............--------------------------------------------------------------------  293
                                      T  A  V  Y  Y  C  A                                                                       
D  93.8% (15/16)    IGHD6-19*01  6    ----------------------------------...C............----------------------------------------  21
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------------....................................  42

                                            
                                      S  S  
                    Query_13553  365  CCTCAG  370
J  100.0% (42/42)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_65564

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           428     3e-122
IGHD2-2*02                                                                                            16.1    2.6   
IGHJ3*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-2*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAAAGGAGT	TTGTAGTGATATGAGTTGCTATA	TTTGGGA	TGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAAAGGAGTTTGTAGTGATATGAGTTGCTATATTTGGGATGACGCCTTTGATATT	ARDKGVCSDMSCYIWDDAFDI	284	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	282	8	0	97.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  S  I  Y 
                    Query_13554  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTAGCATCTAC  91
V  97.2% (282/290)  IGHV1-18*04  7    ..................................................................................C..G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  Q 
                    Query_13554  92   GGTATCTCCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAACTATGCACAG  181
V  97.2% (282/290)  IGHV1-18*04  97   ......AG.....................................................C............................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_13554  182  AACCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  97.2% (282/290)  IGHV1-18*04  187  ..G.........................................................C.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------------CDR3-IMGT-------------------------->               
                                       V  Y  Y  C  A  R  D  K  G  V  C  S  D  M  S  C  Y  I  W  D  D  A  F  D  I  W  G  Q  G  T 
                    Query_13554  272  GTGTACTACTGTGCGAGAGATAAAGGAGTTTGTAGTGATATGAGTTGCTATATTTGGGATGACGCCTTTGATATTTGGGGCCAAGGGACA  361
V  97.2% (282/290)  IGHV1-18*04  277  .....T..............----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  78.3% (18/23)    IGHD2-2*02   7    -----------------------------.......AG..CC..C.......--------------------------------------  29
J  94.0% (47/50)    IGHJ3*02     1    -----------------------------------------------------------...T..T........C...............  31

                                                         
                                       M  V  T  V  S  S  
                    Query_13554  362  ATGGTCACCGTCTCTTCAG  380
J  94.0% (47/50)    IGHJ3*02     32   ...................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_65565

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            357     1e-100
IGHD1-26*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              66.1    4e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTGG	AGTGGGACCTACT	CAAAGGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTGGAGTGGGACCTACTCAAAGGGTTTGACTAC	ARLEWDLLKGFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	238	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_13555  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAACTACTGGATGACTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (238/248)  IGHV3-7*03   47   .............................................G...T.......GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  R  R  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13555  91   AGTGGGTGGCCAACATAAGGCGAGATGGGAGTGAGAAATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (238/248)  IGHV3-7*03   137  ..................A..A......A.............................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  L  E  W  D  L  L  K  
                    Query_13555  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCGTTTATTATTGTGCGAGATTGGAGTGGGACCTACTCAAAG  270
V  96.0% (238/248)  IGHV3-7*03   227  ....................................C...............G.....C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD1-26*01  6    ------------------------------------------------------------------------.......G.....-----  18

                                      ---------->                                  
                                      G  F  D  Y  W  G  Q  G  M  L  V  T  V  S  S  
                    Query_13555  271  GGTTTGACTACTGGGGCCAGGGAATGTTGGTCACCGTCTCCTCAG  315
J  93.0% (40/43)    IGHJ4*02     6    --......................CCC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_65566

Length=380
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           397     8e-113
IGHD1-1*01                                                                                            10.3    134   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAACG	GGTAACCCCATATCGCGGC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTAT	ARGTGNPISRLGY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_13556  1    GCAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGATTTCCTGCAAGGCATCTGGATACACCTTCACCAGCTA  90
V  93.8% (272/290)  IGHV1-46*01  6    ..................G.C...............................G.....................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  T  G  G  T  N  Y  A  Q
                    Query_13556  91   TTATATGCACTGGGTACGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTACTGGTGGCACAAATTACGCACA  180
V  93.8% (272/290)  IGHV1-46*01  96   C..............G...................................................GG....A......GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  P  T  S  T  V  Y  L  D  L  S  S  L  E  S  E  D  T  A
                    Query_13556  181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGCCCACGAGCACAGTCTACTTGGACCTGAGCAGCCTTGAATCTGAGGACACGGC  270
V  93.8% (272/290)  IGHV1-46*01  186  .....................................T.................A....G...........GAG...............  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  W  A  R  G  T  G  N  P  I  S  R  L  G  Y  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_13556  271  CGTTTATTACTGGGCGAGAGGAACGGGTAACCCCATATCGCGGCTTGGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  356
V  93.8% (272/290)  IGHV1-46*01  276  ...G........T.......------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (5/5)     IGHD1-1*01   11   --------------------.....-------------------------------------------------------------  15
J  92.9% (39/42)    IGHJ4*02     7    --------------------------------------------...A...C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37273623


Query= Query_65567

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*02                                                                                            399     3e-113
IGHD3-9*01                                                                                            27.6    8e-04 
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*02	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TTTTC	TTACGATATTTTGTCTG	CCAACACA	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTTTTCTTACGATATTTTGTCTGCCAACACAATGGACGTC	AFSYDILSANTMDV	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	18	6	0	75
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	291	3	3	0	0	100
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  L  T 
                    Query_13557  1    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTAAGGCTTCTGGATACAGCCTCACC  90
V  93.8% (273/291)  IGHV1-2*02   1    ...G...................G.........................................C................C.T.....  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       G  Y  S  V  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  V  N  S  G  A  T  N  Y 
                    Query_13557  91   GGCTACTCTGTGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATTAATGTTAACAGTGGCGCCACAAATTAT  180
V  93.8% (273/291)  IGHV1-2*02   91   .......A.A....................................................C..CCC.........T.G......C...  180
                                       G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  G  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  T  S  D  D 
                    Query_13557  181  GCACAGAAGTTTCAGGGCGGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCGTACATGGAGCTGAGCAGGCTGACATCTGACGAC  270
V  93.8% (273/291)  IGHV1-2*02   181  ..................A.....................................C......................G..........  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                      -----------------><----------------CDR3-IMGT--------------->                              
                                       T  A  V  Y  Y  C  A  F  S  Y  D  I  L  S  A  N  T  M  D  V  W  G  Q  G  T  T  V  T  V  S 
                    Query_13557  271  ACGGCCGTCTATTACTGTGCGTTTTCTTACGATATTTTGTCTGCCAACACAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCC  360
V  93.8% (273/291)  IGHV1-2*02   271  ........G............---------------------------------------------------------------------  291
                                       T  A  V  Y  Y  C  A                                                                      
D  94.1% (16/17)    IGHD3-9*01   4    --------------------------.............A...-----------------------------------------------  20
J  100.0% (42/42)   IGHJ6*02     21   ---------------------------------------------------.......................................  59

                                         
                                       S 
                    Query_13557  361  TCA  363
J  100.0% (42/42)   IGHJ6*02     60   ...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_152083

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           325     3e-91
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGGGAA	AACGAC	TGGGATCGTAGGTGGTCCGGT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGGGAAAACGACTGGGATCGTAGGTGGTCCGGTTTTCACTTC	ASRENDWDRRWSGFHF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13558  1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.0% (225/242)  IGHV4-59*08  49   ....................T......................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       L  I  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S  R  N 
                    Query_13558  91   TTGATTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGTCGACTCACCATCTCAGTAGACACGTCGAGGAAC  180
V  93.0% (225/242)  IGHV4-59*08  139  .G......G...A........A........A.....................A.......G.......A..............C.A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  S  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  R  E  N  D  W  D  R  R  W 
                    Query_13558  181  CAGTTCTCCCTGAGCGTGAACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCGAGCCGGGAAAACGACTGGGATCGTAGGTGG  270
V  93.0% (225/242)  IGHV4-59*08  229  .............AGC...G.........C................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD1-1*01   12   ---------------------------------------------------------------------......---------------  17

                                      -------------->                                  
                                       S  G  F  H  F  W  G  P  G  T  L  V  T  V  S  S  
                    Query_13558  271  TCCGGTTTTCACTTCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  319
J  93.0% (40/43)    IGHJ4*02     6    ------...G...A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_152082

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           349     3e-98
IGHD3-16*01                                                                                           18.0    0.64 
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGAGTGATG	GTCTCAT	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTC	ARRGSDGLIDAFDL	278	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	17	7	0	70.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	277	114	95	13	6	83.3
CDR3-IMGT (germline)	278	283	6	6	0	0	100
Total	N/A	N/A	289	258	25	6	89.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  T  C  E  G  S  G  Y  N  F  P  R  Y
                    Query_13559  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCACCTGTGAGGGCTCTGGATACAATTTCCCCCGTTA  90
V  89.3% (258/289)  IGHV5-51*03  6    .......................................................T.....A....T..........GC..TA..A.C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_13559  91   TTGGATCGGTTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACAGTCC  180
V  89.3% (258/289)  IGHV5-51*03  96   C........C.......................................................G.....................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  E  G  Q  V  T  I  S  V  E  K  S  I        V  Y  L  Q  W  R  R  L  K  A  S  D  T  A
                    Query_13559  181  GGCCTTCGAGGGCCAGGTCACCATCTCAGTCGAGAAGTCCAT------TGTCTACCTGCAGTGGAGAAGGCTGAAGGCCTCGGACACTGC  264
V  89.3% (258/289)  IGHV5-51*03  186  .T.....C.A...................C...C........CAGCACC.C...............C..C.................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        I  Y  Y  C  A  R  R  G  S  D  G  L  I  D  A  F  D  L  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13559  265  CATATATTACTGCGCGAGACGGGGGAGTGATGGTCTCATTGATGCATTTGATCTCTGGGGCCAAGGGACACTGGTCACCGTCTCTTCAG  353
V  89.3% (258/289)  IGHV5-51*03  276  ...G........T......----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  91.7% (11/12)    IGHD3-16*01  18   --------------------........T...---------------------------------------------------------  29
J  94.0% (47/50)    IGHJ3*01     1    ---------------------------------------......T......G.................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_152081

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           343     2e-96
IGHD3-3*01                                                                                            14.1    8.2  
IGHJ5*02                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	246	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	47	4	0	92.2
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	110	4	0	96.5
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  
                    Query_13560  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGCC  93
V  94.3% (233/247)  IGHV4-31*03  50   .....TCC...A.....................C......C.............................C...................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  
                    Query_13560  94   TGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGGGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  94.3% (233/247)  IGHV4-31*03  140  ....G.........T.C..........................................A..............................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F  
                    Query_13560  184  AGAACCAGTTCTCCCTGAGGCTCAGCTCTGTGACTGCCGCGGACACGGCCGTGTACTACTGTGCGAGGGGAGTGGGTAACAACTGGTTCG  273
V  94.3% (233/247)  IGHV4-31*03  230  ..................A...G................................T...........-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-3*01   15   --------------------------------------------------------------------.......---------------  21
J  100.0% (51/51)   IGHJ5*02     1    ------------------------------------------------------------------------------............  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13560  274  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (51/51)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_152087

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           422     2e-120
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	CCGCCTTCCCTAGCGACACCGGG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCGCCTTCCCTAGCGACACCGGGTACTTTGACTAC	ARAAFPSDTGYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	280	10	0	96.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  D  T  F  T  R  Y
                    Query_13561  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGAGACACCTTCACCAGGTA  90
V  96.6% (280/290)  IGHV1-46*01  6    .........................................................................T.............C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  S  G  A  T  K  Y  A  Q
                    Query_13561  91   CTTTATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTAGTGGAGCCACAAAATACGCACA  180
V  96.6% (280/290)  IGHV1-46*01  96   ..A................................................................G....TAG.....GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  I  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_13561  181  GAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAATCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  96.6% (280/290)  IGHV1-46*01  186  .................................................G........................................  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        V  Y  Y  C  A  R  A  A  F  P  S  D  T  G  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13561  271  CGTGTATTACTGTGCGAGAGCCGCCTTCCCTAGCGACACCGGGTACTTTGACTACTGGGGTCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  96.6% (280/290)  IGHV1-46*01  276  ....................---------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                       
J  97.8% (45/46)    IGHJ4*02     3    -------------------------------------------.................C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_152086

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	274	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  H
                    Query_13562  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCCA  90
V  95.1% (274/288)  IGHV5-51*01  6    .............................................................A...G............C.......G.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_13562  91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  95.1% (274/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_13562  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  95.1% (274/288)  IGHV5-51*01  186  ...............G.........................T.........................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13562  271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  95.1% (274/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_152085

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           279     3e-77
IGHD3-10*02                                                                                           14.1    9.1  
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	CCGCAGCGCA	ATGTTCG	CAGGCTCGCCATCGGGAGCCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGACCGCAGCGCAATGTTCGCAGGCTCGCCATCGGGAGCCAACTACTACTCCTACGGGATGGACGTC	AKDRSAMFAGSPSGANYYSYGMDV	243	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	214	36	0	85.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  T  A  H  G  M  H  W  V  R  Q  A  P  G  R  G  L  
                    Query_13563  1    GGTCCCTGAGACTCTCCTGTGCAACCTCAGGATTCACCTTCACCGCCCATGGCATGCACTGGGTCCGCCAGGCTCCTGGCAGGGGTCTAG  90
V  85.6% (214/250)  IGHV3-30*18  47   .......................G....T.............GTAG.T............................A....A...G..G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  L  S  F  D  G  G  G  R  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  V  S  
                    Query_13563  91   AGTGGGTGGCCGTTTTGTCATTTGATGGAGGTGGCAGGTATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGTCTCCA  180
V  85.6% (214/250)  IGHV3-30*18  137  ..........A...A.A....A.......A..AAT.AA..C..........................................AAT....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      T  N  T  V  Y  L  Q  M  A  S  L  R  P  D  D  T  A  V  Y  Y  C  A  K  D  R  S  A  M  F  A  
                    Query_13563  181  CGAACACGGTGTATCTGCAAATGGCCAGCCTGCGACCTGACGACACAGCTGTCTATTATTGTGCGAAGGACCGCAGCGCAATGTTCGCAG  270
V  85.6% (214/250)  IGHV3-30*18  227  A.......C..............AA.......A..G....G.....G.....G.....C........A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-10*02  9    --------------------------------------------------------------------------------.......---  15

                                      ----CDR3-IMGT------------------------------>                                 
                                      G  S  P  S  G  A  N  Y  Y  S  Y  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_13563  271  GCTCGCCATCGGGAGCCAACTACTACTCCTACGGGATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  347
J  94.9% (56/59)    IGHJ6*02     4    ------------------.........A......T...............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_152084

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           319     2e-89
IGHD1-1*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCGGGAA	AACGAC	TGGGATCGTAGGTGGTCCGGT	TTTCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCGGGAAAACGACTGGGATCGTAGGTGGTCCGGTTTTCACTTC	ASRENDWDRRWSGFHF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	223	19	0	92.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13564  1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCTCCATCAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.1% (223/242)  IGHV4-59*08  49   ....................T......................G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       L  I  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S  R  N 
                    Query_13564  91   TTGATTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGCCGACTCACCATCTCAGTAGACACGTCGAGGAAC  180
V  92.1% (223/242)  IGHV4-59*08  139  .G......G...A........A........A.....................A...T...G.......A..............C.A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  S  V  N  S  V  T  T  A  D  T  A  V  Y  Y  C  A  S  R  E  N  D  W  D  R  R  W 
                    Query_13564  181  CAGTTCTCCCTGAGCGTGAACTCTGTGACGACCGCAGACACGGCCGTGTATTACTGTGCGAGCCGGGAAAACGACTGGGATCGTAGGTGG  270
V  92.1% (223/242)  IGHV4-59*08  229  .............AGC...G.........CG...............................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD1-1*01   12   ---------------------------------------------------------------------......---------------  17

                                      -------------->                                  
                                       S  G  F  H  F  W  G  P  G  T  L  V  T  V  S  S  
                    Query_13564  271  TCCGGTTTTCACTTCTGGGGCCCGGGAACCCTGGTCACCGTCTCCTCAG  319
J  93.0% (40/43)    IGHJ4*02     6    ------...G...A........A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_263781

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            321     6e-90
IGHD5-18*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TCCC	TGGATACAGCTATGGTT	CAG	TTTGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTCCCTGGATACAGCTATGGTTCAGTTTGTCTAC	ASLDTAMVQFVY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  I  S  G  F  S  I  S  N  Y  W  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13565  1    GGTCCCTGAGACTCTCCTGTGCAATCTCTGGATTCAGTATCAGTAACTATTGGCTGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  91.8% (225/245)  IGHV3-7*03   47   .......................GC...........CCT.T....G.......A.............C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  C  I  K  K  D  E  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13565  91   AGTGGGTGGCCTGCATAAAGAAGGATGAAAGTGAGAAGTACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  91.8% (225/245)  IGHV3-7*03   137  ...........AA.......C.A....G.........A....................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  M  Y  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  S  L  D  T  A  M  V  Q  
                    Query_13565  181  AGAACTCAATGTATTTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCCCTGTATTATTGTGCGTCCCTGGATACAGCTATGGTTCAGT  270
V  91.8% (225/245)  IGHV3-7*03   227  ........C.....C.....................C.............G.......C......-------------------------  291
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------------------------------------------------.................----  18
J  97.6% (40/41)    IGHJ4*02     6    -----------------------------------------------------------------------------------------.  6

                                      ------->                                
                                      F  V  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13565  271  TTGTCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  310
J  97.6% (40/41)    IGHJ4*02     7    ...A....................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_263780

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           377     9e-107
IGHD3-10*01                                                                                           23.8    0.011 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	22	2	0	91.7
FR2-IMGT	75	125	51	50	1	0	98
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	110	4	0	96.5
CDR3-IMGT (germline)	261	265	5	5	0	0	100
Total	N/A	N/A	265	253	12	0	95.5


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  
                    Query_13566  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGC  90
V  95.5% (253/265)  IGHV4-59*01  26   ................T................................................AG.......................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_13566  91   AGCCCCCCGGGAAGGGACTGGAGTGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  95.5% (253/265)  IGHV4-59*01  116  .......A...............................AT........G.G......................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  
                    Query_13566  181  TATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAG  270
V  95.5% (253/265)  IGHV4-59*01  206  ....................................A......C.........G................G..............-----  290
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A        
D  93.3% (14/15)    IGHD3-10*01  11   -----------------------------------------------------------------------------------------.  11

                                      -------CDR3-IMGT--------------->                                  
                                      G  S  G  N  Y  E  G  W  L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13566  271  GTTCGGGGAATTATGAGGGCTGGCTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  93.3% (14/15)    IGHD3-10*01  12   .........G....----------------------------------------------------  25
J  97.9% (46/47)    IGHJ5*02     5    -------------------....T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_263783

Length=362
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           319     2e-89
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ3*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTTCAGAGGCACTT	CTATGACACTTGTGGTTAT	GGGGTC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTTCAGAGGCACTTCTATGACACTTGTGGTTATGGGGTCGATGCTTTTGATGCC	AKDLQRHFYDTCGYGVDAFDA	243	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_13567  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAGCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  90.8% (227/250)  IGHV3-23*01  47   ..........................................G..............G...........................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  L  D  G  S  G  H  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13567  91   AGTGGGTCTCAGCACTTGATGGCAGTGGTCATAAGACATACTACGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAATTCCA  180
V  90.8% (227/250)  IGHV3-23*01  137  .............TA..AG...T......GG..GC.............................G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------------C
                                      K  N  T  V  Y  L  Q  L  D  S  L  G  V  E  D  T  A  L  Y  Y  C  A  K  D  L  Q  R  H  F  Y  
                    Query_13567  181  AGAACACAGTGTACCTGCAATTAGATAGCCTGGGAGTCGAGGACACGGCCTTATATTACTGTGCGAAAGATCTTCAGAGGCACTTCTATG  270
V  90.8% (227/250)  IGHV3-23*01  227  .......GC....T......A.GA.C......A...C.............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  84.2% (16/19)    IGHD3-22*01  7    -------------------------------------------------------------------------------------.....  11

                                      DR3-IMGT-------------------------->                                  
                                      D  T  C  G  Y  G  V  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13567  271  ACACTTGTGGTTATGGGGTCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTTACAGTCTCTTCAG  339
D  84.2% (16/19)    IGHD3-22*01  12   .T.G.A........-------------------------------------------------------  25
J  93.9% (46/49)    IGHJ3*01     2    --------------------.............T.....................C..C..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35372985


Query= Query_100339

Length=411
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           353     1e-99
IGHD2-15*01                                                                                           14.1    10   
IGHJ5*02                                                                                              79.5    5e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACTCCACCTTTAAAATTT	GATATTG	ATGGTTTCCCTGAGGCCCCCGCGAT	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACTCCACCTTTAAAATTTGATATTGATGGTTTCCCTGAGGCCCCCGCGATCTGGCTCGACCCC	ARTPPLKFDIDGFPEAPAIWLDP	284	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	257	31	0	89.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  S  S  V  K  V  S  C  R  A  S  G  G  T  F  G  T  Y
                    Query_13568  1    GCAGCTGGTGCAGTCTGGAGCTGAGATGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAGGGCTTCTGGAGGCACCTTCGGTACCTA  90
V  89.2% (257/288)  IGHV1-69*06  6    ..................G......G....................................A...................A.C.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        G  V  T  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  G  F  I  P  I  F  G  T  A  N  N  T  Q
                    Query_13568  91   TGGAGTGACCTGGGTGCGGCAGGCCCCGGGACAACGACTTGAGTGGATGGGAGGGTTCATCCCCATCTTTGGAACAGCAAACAACACACA  180
V  89.2% (257/288)  IGHV1-69*06  96   ..CTA.C.G.........A........T......G.G..................A.......T........T.........T..G....  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  M  D  K  A  T  N  T  A  Y  M  E  L  S  R  L  T  S  D  D  T  A
                    Query_13568  181  GAAGTTCCAGGGCAGAGTCACGATCACCATGGACAAAGCCACGAACACAGCCTACATGGAGCTGAGCAGGCTGACTTCTGACGACACGGC  270
V  89.2% (257/288)  IGHV1-69*06  186  ........................T...GC.......T......G........................C....GA.....G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------------CDR3-IMGT----------------------------->        
                                        I  Y  Y  C  A  R  T  P  P  L  K  F  D  I  D  G  F  P  E  A  P  A  I  W  L  D  P  W  G  Q
                    Query_13568  271  CATCTATTACTGTGCGAGGACTCCACCTTTAAAATTTGATATTGATGGTTTCCCTGAGGCCCCCGCGATCTGGCTCGACCCCTGGGGCCA  360
V  89.2% (257/288)  IGHV1-69*06  276  .G.G..............------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  100.0% (7/7)     IGHD2-15*01  3    -------------------------------------.......----------------------------------------------  9
J  95.7% (45/47)    IGHJ5*02     5    ---------------------------------------------------------------------....T................  25

                                                                
                                        G  T  L  V  S  V  S  S  
                    Query_13568  361  GGGAACCCTGGTCTCCGTCTCCTCAG  386
J  95.7% (45/47)    IGHJ5*02     26   .............A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40288536


Query= Query_263784

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           430     1e-122
IGHD3-16*02                                                                                           37.2    1e-06 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGGTC	CGTTTGGGGGAATTATCGTTAT	TTGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCGTTTGGGGGAATTATCGTTATTTGGGCTAC	ARGSVWGNYRYLGY	289	330	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	73	1	0	98.6
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	23	1	0	95.8
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	294	6	6	0	0	100
Total	N/A	N/A	293	284	9	0	96.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  
                    Query_13569  2    AGGTGCAGCTGGTGCAGTCTGGAGCGGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  91
V  96.9% (284/293)  IGHV5-51*01  2    .........................A................................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  I  R  Y  
                    Query_13569  92   GCTATTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATATCAGATACA  181
V  96.9% (284/293)  IGHV5-51*01  92   ....C...................................................A........................C........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  T  T  T  A  Y  L  Q  W  N  S  L  K  A  S  D  
                    Query_13569  182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCACCACTACCGCCTACCTGCAGTGGAACAGCCTGAAGGCCTCGGACA  271
V  96.9% (284/293)  IGHV5-51*01  182  .............................................T..GC...................G....................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><----------------CDR3-IMGT--------------->                               
                                      T  A  I  Y  Y  C  A  R  G  S  V  W  G  N  Y  R  Y  L  G  Y  W  G  Q  G  T  L  V  T  V  S  
                    Query_13569  272  CCGCCATATATTACTGTGCGAGAGGGTCCGTTTGGGGGAATTATCGTTATTTGGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCT  361
V  96.9% (284/293)  IGHV5-51*01  272  .......G...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  95.5% (21/22)    IGHD3-16*02  13   ----------------------------...........G..........----------------------------------------  34
J  100.0% (38/38)   IGHJ4*02     11   -------------------------------------------------------...................................  45

                                         
                                      S  
                    Query_13569  362  CAG  364
J  100.0% (38/38)   IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_263787

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           358     4e-101
IGHD6-13*01                                                                                           23.8    0.010 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGGC	AGCAGCAGCTGG	ACAGGGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGCAGCAGCAGCTGGACAGGGGTTGACTCC	ARDQGSSSWTGVDS	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	237	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13570  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATAAGTAATTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (237/245)  IGHV4-59*01  49   ...................C..................C....G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  R  N 
                    Query_13570  91   TGGATTGGATATATCTATTACAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAGGAAC  180
V  96.7% (237/245)  IGHV4-59*01  139  ........G..........................C.................................................A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  G  S  S  S  W  T  G 
                    Query_13570  181  CAGTTCTCCCTGAAGCTGAGTTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGATCAGGGCAGCAGCAGCTGGACAGGG  270
V  96.7% (237/245)  IGHV4-59*01  229  ....................C................................C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (12/12)   IGHD6-13*01  7    ------------------------------------------------------------------------............------  18

                                      -------->                                  
                                       V  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13570  271  GTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.6% (41/42)    IGHJ4*02     7    -......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_263786

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           341     5e-96
IGHD6-13*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGATGGGGG	AGCAGCAGCTGGT	CTGCCCCTC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGATCGATGGGGGAGCAGCAGCTGGTCTGCCCCTCACTTTGACTGC	TRDRWGSSSWSAPHFDC	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	134	30	22	8	0	73.3
FR3-IMGT	135	248	114	106	8	0	93
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	237	19	0	92.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  N  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13571  1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCAACTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.6% (237/256)  IGHV3-49*04  47   ....................................C.....................................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  V  R  S  Y  T  H  G  G  T  T  A  Y  A  A  A  V  K  G  R  F  T  I  S  R  D  
                    Query_13571  91   AGTGGGTTGGCTTCGTGAGAAGTTATACCCATGGTGGGACAACAGCTTACGCCGCGGCTGTGAAAGGCAGATTCACCATCTCAAGGGATG  180
V  92.6% (237/256)  IGHV3-49*04  137  .......A..T...A.T.....CA.AG.TT...............AA.........T............................A....  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  T  S  I  A  Y  L  E  M  D  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  D  R  W  G  S  
                    Query_13571  181  ATTCCACAAGCATCGCCTATCTGGAAATGGACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGCACTAGAGATCGATGGGGGAGCA  270
V  92.6% (237/256)  IGHV3-49*04  227  ......A................C.....A.....................................T........--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (13/13)   IGHD6-13*01  7    --------------------------------------------------------------------------------------....  10

                                      DR3-IMGT-------------------->                                  
                                      S  S  W  S  A  P  H  F  D  C  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13571  271  GCAGCTGGTCTGCCCCTCACTTTGACTGCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD6-13*01  11   .........------------------------------------------------------  19
J  97.8% (44/45)    IGHJ4*02     4    ------------------.........A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_32797

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            321     6e-90
IGHD6-19*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TCAGGAGT	AGTGGCTGG	AC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGGAGTAGTGGCTGGACCTTTGAGTCG	VRSSGWTFES	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	243	1	1	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  S  P  Y  W  M  N  W  V  R  Q  S  P  G  K  G  L  
                    Query_13572  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATGTTTAGTCCTTATTGGATGAACTGGGTCCGCCAGTCTCCAGGGAAGGGGCTGG  90
V  92.2% (224/243)  IGHV3-7*01   47   ....................................CC......AGC..........G.............G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  L  D  G  S  Q  E  Y  H  M  D  S  V  R  G  R  F  T  I  S  R  D  T  A  
                    Query_13572  91   AGTGGGTGGCCAACATAAAGCTGGATGGAAGTCAGGAATACCATATGGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACACCGCCA  180
V  92.2% (224/243)  IGHV3-7*01   137  .....................AA.........G..A.....T..G............A..........................A.....  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      S  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  S  S  G  W  T  F  E  
                    Query_13572  181  GCAACTCACTATATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGTCAGGAGTAGTGGCTGGACCTTTGAGT  270
V  92.2% (224/243)  IGHV3-7*01   227  AG........G.........................................G..........---------------------------  289
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  100.0% (9/9)     IGHD6-19*01  10   -----------------------------------------------------------------------.........----------  18
J  92.9% (39/42)    IGHJ4*02     5    ----------------------------------------------------------------------------------......C.  12

                                      ->                                
                                      S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13572  271  CGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  304
J  92.9% (39/42)    IGHJ4*02     13   AC................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_263788

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           333     1e-93
IGHD3-10*01                                                                                           44.9    5e-09
IGHJ5*01                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAC	ATTACTATGCTTCGGGGAGTTATTAT	GCG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGACATTACTATGCTTCGGGGAGTTATTATGCGGACTCT	ARGHYYASGSYYADS	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	250	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  F  P  G  K  G  
                    Query_13573  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGTTCCCAGGGAAGGGCC  93
V  93.1% (230/247)  IGHV4-31*03  50   .....TCC...A..........................A...................................CA..............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  C  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  R  S  R  A  T  I  S  V  D  T  S  
                    Query_13573  94   TGGAGTGCATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCCGGAGTCGAGCTACCATTTCAGTAGACACGTCTA  183
V  93.1% (230/247)  IGHV4-31*03  140  .......G.........................G......................AA........T......A................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  Y  Y  A  S  G  
                    Query_13573  184  AGAACCAGTTTTCCCTGAACCTGCGCTCTGTGACTGCCGCGGACACGGCCGTTTATTACTGTGCGAGGGGACATTACTATGCTTCGGGGA  273
V  93.1% (230/247)  IGHV4-31*03  230  ..........C........G...A............................G..............-----------------------  296
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  96.2% (25/26)    IGHD3-10*01  3    ------------------------------------------------------------------------.........G........  20

                                      ---------------->                                  
                                      S  Y  Y  A  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13573  274  GTTATTATGCGGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  96.2% (25/26)    IGHD3-10*01  21   ........-------------------------------------------  28
J  95.0% (38/40)    IGHJ5*01     12   -----------.....C........A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_177741

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           369     2e-104
IGHD6-13*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGA	GGGTATAG	GAAGGTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGAGGGTATAGGAAGGTGGACGGTATGGACGTC	AREGGYRKVDGMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	243	7	0	97.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  E  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_13574  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAATTATGAAATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  97.2% (243/250)  IGHV3-48*03  47   .............................................G...........A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  R  G  S  I  K  Y  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_13574  91   AGTGGGTTTCATACATTAGTAGTAGGGGTAGTATCAAATACTACGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  97.2% (243/250)  IGHV3-48*03  137  .........................T.......C..T..................................A..................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  E  G  G  Y  R  K  V  
                    Query_13574  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGAGAGGGAGGGTATAGGAAGGTGG  270
V  97.2% (243/250)  IGHV3-48*03  227  ....................................C.................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-13*01  1    --------------------------------------------------------------------------........--------  8

                                      ------------->                                 
                                      D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13574  271  ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  100.0% (47/47)   IGHJ6*02     16   ...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_220108

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD5-18*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TATAGTC	ATGGTTAC	GGAGGAG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATATAGTCATGGTTACGGAGGAGTTGACTAC	ARYSHGYGGVDY	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	113	1	0	99.1
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	233	9	0	96.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  V  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_13575  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGTCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  96.3% (233/242)  IGHV4-59*01  50   .....TCC...A....C.............G...........................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  N  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_13575  94   GGATTGGGTATATCTACAACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  96.3% (233/242)  IGHV4-59*01  140  ................TT........................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Y  S  H  G  Y  G  G  V  D  
                    Query_13575  184  AGTTCTCCCTGAAGCTAAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATATAGTCATGGTTACGGAGGAGTTGACT  273
V  96.3% (233/242)  IGHV4-59*01  230  ................G.............................................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD5-18*01  13   ---------------------------------------------------------------------........-------------  20
J  100.0% (42/42)   IGHJ4*02     7    ------------------------------------------------------------------------------------......  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13575  274  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (42/42)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_220109

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           338     5e-95
IGHD2-21*02                                                                                           12.2    32   
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGCGGG	GACTGC	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCGGGGACTGCCTACTACTACGGCAAGGACGTC	ARGAGTAYYYGKDV	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  N  S  G  G  Y  F  W  S  W  I  R  Q  T  P  G  K  G 
                    Query_13576  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAACAGTGGTGGTTACTTCTGGAGCTGGATCCGGCAGACCCCAGGGAAGGGA  90
V  93.2% (233/250)  IGHV4-61*08  49   ..................A.................G...G..............A...................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  M  Y  Y  S  G  S  T  D  Y  H  P  S  L  R  S  R  V  S  I  S  V  D  T  S 
                    Query_13576  91   CTGGAGTGGATTGGCTATATGTATTACAGTGGGAGCACCGATTACCACCCCTCCCTCAGGAGTCGAGTCAGCATATCAGTCGACACGTCC  180
V  93.2% (233/250)  IGHV4-61*08  139  ..............G.....C..................A.C...A............A...........C.........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  R  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  T  A  Y  Y 
                    Query_13576  181  AAGAACCAGTTCTCCCTGAACCTGAGGTCTGTGTCCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGGCGGGGACTGCCTACTAC  270
V  93.2% (233/250)  IGHV4-61*08  229  ....................G.....C......A....T...............................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD2-21*02  17   -----------------------------------------------------------------------------......-------  22
J  96.4% (53/55)    IGHJ6*02     8    -----------------------------------------------------------------------------------.......  14

                                      -------------->                                 
                                       Y  G  K  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13576  271  TACGGCAAGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  96.4% (53/55)    IGHJ6*02     15   .....T.T........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_220106

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            293     2e-81
IGHD4-17*01                                                                                           14.1    8.7  
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TGGGCCTCAGGGCACTC	ACTACGG	GATGTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTGGGCCTCAGGGCACTCACTACGGGATGTCCTACTTCTACGGATTGGACGTC	ASGPQGTHYGMSYFYGLDV	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	18	9	0	66.7
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	216	29	0	88.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  V  V  S  G  G  S  I  S  S  D  R  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_13577  1    ACCCTGTCCCTCACCTGCGTTGTGTCTGGTGGCTCCATCAGTTCCGACAGGTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  88.2% (216/245)  IGHV4-4*02   49   ...................C...C.................CAGTAGT.AC.......G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  V  G  E  V  Y  H  T  G  S  A  N  S  K  P  S  L  E  S  R  V  T  L  S  V  D  K  S  R 
                    Query_13577  91   GAGTGGGTTGGGGAAGTCTATCATACTGGGAGCGCCAACTCCAAGCCGTCCCTCGAGAGTCGAGTCACCTTGTCAGTAGACAAGTCCAGG  180
V  88.2% (216/245)  IGHV4-4*02   139  ......A........A.........G.......A......A...C.........A..............A.A................A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       N  T  F  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  G  P  Q  G  T  H  Y  G 
                    Query_13577  181  AACACCTTTTCCCTGAGCCTGAGGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGTGGGCCTCAGGGCACTCACTACGGG  270
V  88.2% (216/245)  IGHV4-4*02   229  ...CAG..C.......AG.....C.........................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  3    ----------------------------------------------------------------------------------.......-  9

                                      MGT----------------------->                                 
                                       M  S  Y  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13577  271  ATGTCCTACTTCTACGGATTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  330
J  94.5% (52/55)    IGHJ6*02     8    -----.....A......TA.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_220105

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           405     4e-115
IGHD1-26*01                                                                                           16.1    2.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCGATG	ATACTGGGGGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTC	RDMAMILGATFTTSTVWTS	290	346	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	100	24	19	4	1	79.2
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	109	5	0	95.6
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	295	279	15	1	94.6


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S   D  T  A  F  P 
                    Query_13578  4    AGGTCCAGCTTGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGAGAGTCTCTGAAGATCTCCTGTAAGGGTTCTG-ATACAGCTTTTCCA  92
V  94.6% (279/295)  IGHV5-51*01  2    ....G.....G................................G...............................G..........A...  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                       L  I  G  S  P  G  C  A  R  C  P  G  K  A  W  S  G  W  G  S  S  I  L  V  T  L  M  P  D  T 
                    Query_13578  93   CTTATTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCGATCCTGGTGACTCTGATGCCAGATACA  182
V  94.6% (279/295)  IGHV5-51*01  92   GC..C.......G.................................................T.................A.........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                       T  R  P  S  K  A  R  S  P  S  Q  S  T  S  P  S  A  P  P  T  C  S  G  A  A  W  R  P  R  T 
                    Query_13578  183  ACCCGTCCTTCGAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGGAGGCCTCGGACA  272
V  94.6% (279/295)  IGHV5-51*01  182  G..........C.....................C...........................................A............  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                       P  P  S  I  T  V  R  D  M  A  M  I  L  G  A  T  F  T  T  S  T  V  W  T  S  G  A  K  G  P 
                    Query_13578  273  CCGCCATCTATTACTGTGCGAGACATGGCGATGATACTGGGGGCTACCTTTACTACCTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  362
V  94.6% (279/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  85.7% (12/14)    IGHD1-26*01  4    ---------------------------------...G....A.....-------------------------------------------  17
J  94.7% (54/57)    IGHJ6*02     6    --------------------------------------------------......TA................................  45

                                                       
                                       R  S  P  S  R   
                    Query_13578  363  CGGTCACCGTCTCGTCA  379
J  94.7% (54/57)    IGHJ6*02     46   .............C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_220102

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           12.2    32    
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	GTCAAGAGAC	CTATGG	CCTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGTCAAGAGACCTATGGCCTCACTACTTTGACCAC	ARESRDLWPHYFDH	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13579  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGTTACGAAATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-48*03  47   ........................................C........T........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  S  S  G  S  I  I  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_13579  91   AGTGGGTTTCACATATTAGTAGTAGTGGTAGTATCATACACTACGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  96.0% (240/250)  IGHV3-48*03  137  ...........T.C...................C....T...............................................G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  E  S  R  D  L  W  P  
                    Query_13579  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTTCTGTGCGAGGGAGTCAAGAGACCTATGGCCTC  270
V  96.0% (240/250)  IGHV3-48*03  227  .........................................................A.........A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-10*01  7    --------------------------------------------------------------------------------......----  12

                                      ------------->                                  
                                      H  Y  F  D  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_13579  271  ACTACTTTGACCACTGGGGCCAGGGAGCCTTGGTCACCGTCTCCTCAG  318
J  93.8% (45/48)    IGHJ4*02     1    ...........T..............A..C..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_220103

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     5e-96
IGHD6-19*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAGATATCTCC	TAGCAGTGGCTGGT	CAACACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGATATCTCCTAGCAGTGGCTGGTCAACACCTCTATTTGACTAC	ARQISPSSGWSTPLFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  T  Y  T  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_13580  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTACCTATACCATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (233/248)  IGHV3-21*01  47   ....................G........................G.....G....A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  S  F  I  N  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13580  91   AGTGGGTCTCATCCATCAGTAGTAGAGGTAGTTTCATAAATTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (233/248)  IGHV3-21*01  137  ................T........TA......A....T.C............G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  I  S  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  S  S  G  
                    Query_13580  181  AGAACTCACTGTATCTGCAAATAAGCAGCCTGAGAGGCGAGGACACGGCTGTTTATTACTGTGCGAGACAGATATCTCCTAGCAGTGGCT  270
V  94.0% (233/248)  IGHV3-21*01  227  ......................G.A...........C...............G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD6-19*01  6    -------------------------------------------------------------------------------...........  16

                                      GT-------------------->                                  
                                      W  S  T  P  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13580  271  GGTCAACACCTCTATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (14/14)   IGHD6-19*01  17   ...------------------------------------------------------  19
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_220100

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           12.2    30    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAAAGTCCGGC	CGGGGA	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAAGTCCGGCCGGGGATTTGACTTC	AKKSGRGFDF	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	238	8	0	96.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13581  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAATTATGAAATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.7% (238/246)  IGHV3-48*03  47   .............................................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  S  S  G  S  I  I  Y  Y  A  D  S  V  K  G  R  F  A  I  S  R  D  Y  S  
                    Query_13581  91   AGTGGGTTTCATACATTAGTAGTAGTGGTAGTATCATATATTACGCAGACTCTGTGAAGGGCCGATTCGCCATCTCCAGAGACTACTCCA  180
V  96.7% (238/246)  IGHV3-48*03  137  .................................C......C...........................A..............A..G...  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  K  S  G  R  G  F  D  
                    Query_13581  181  AAAACTCTCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAAAAAGTCCGGCCGGGGATTTGACT  270
V  96.7% (238/246)  IGHV3-48*03  227  .G.....A..........................................................------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD3-10*01  15   -----------------------------------------------------------------------------......-------  20
J  97.6% (40/41)    IGHJ4*02     6    -----------------------------------------------------------------------------------.......  12

                                      ->                                
                                      F  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13581  271  TCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  304
J  97.6% (40/41)    IGHJ4*02     13   A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_177742

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           363     2e-102
IGHD6-19*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	CGTCGTCCGC	CAGTGGCTGG	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAAT	ARPSSASGWHFDN	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	66	4	0	94.3
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	261	29	0	90


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  M  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_13582  1    GCAGCTGGTGCAGTCTGGAGCAGAGATGAAAAAGCCAGGAGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATATACGTTCACCAGTTA  90
V  90.0% (261/290)  IGHV5-51*01  6    .........................G..........C..G.........................G.........C.GC..T.....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  L  P  H  D  S  E  I  G  Y  S  P
                    Query_13582  91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTTACCTCATGACTCTGAGATTGGATATAGTCC  180
V  90.0% (261/290)  IGHV5-51*01  96   C.......G..................................................AT...GG.........T.CCA....C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  V  A  G  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  G
                    Query_13582  181  GTCCTTCCAAGGCCATGTCACCATCTCAGTCGCCGGGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACCCCGG  270
V  90.0% (261/290)  IGHV5-51*01  186  ...............G.............C..A.AA........G........................................A...C  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        M  Y  Y  C  A  R  P  S  S  A  S  G  W  H  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13582  271  CATGTATTACTGTGCGAGACCGTCGTCCGCCAGTGGCTGGCACTTTGACAATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  90.0% (261/290)  IGHV5-51*01  276  ....................------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (10/10)   IGHD6-19*01  9    ------------------------------..........----------------------------------------------  18
J  95.6% (43/45)    IGHJ4*02     4    -----------------------------------------........T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_114329

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           308     4e-86
IGHD5-12*01                                                                                           18.0    0.60 
IGHJ2*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD5-12*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGCGATGTATGAT	TATAGTGGC	ACAATATAT	TGGTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGCGATGTATGATTATAGTGGCACAATATATTGGTACTTCGATCTC	ARQAMYDYSGTIYWYFDL	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	21	9	0	70
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	224	27	0	89.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  M  S  S  R  A  Y  P  W  A  W  V  R  Q  P  P  R  K  G 
                    Query_13583  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATGAGTAGTAGGGCCTACCCCTGGGCCTGGGTCCGCCAGCCCCCACGGAAGGGC  90
V  89.2% (224/251)  IGHV4-39*01  49   ...............................G......C..C.....TAGT...TA.....G....A..............G.......G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  I  Y  N  T  G  R  T  Y  Y  N  P  S  L  K  S  R  V  T  I  P  V  D  T  S 
                    Query_13583  91   CTGGAGTGGATTGGGACCATCTATAACACTGGGAGGACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATACCCGTGGACACGTCG  180
V  89.2% (224/251)  IGHV4-39*01  139  ................GT......T.T.G......C.......................................T....A........C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       N  N  Q  F  S  L  H  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  A  M  Y  D  Y  S 
                    Query_13583  181  AACAACCAGTTCTCCCTGCACCTGAACTCTGTGACCGCCGCAGACACGGCTGTATATTACTGTGCGAGACAAGCGATGTATGATTATAGT  270
V  89.2% (224/251)  IGHV4-39*01  229  ..G...............A.G....G...........................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD5-12*01  6    ------------------------------------------------------------------------------------......  11

                                      -IMGT--------------------->                                  
                                       G  T  I  Y  W  Y  F  D  L  W  G  R  G  S  L  V  A  V  S  S  
                    Query_13583  271  GGCACAATATATTGGTACTTCGATCTCTGGGGCCGTGGCTCCCTGGTCGCTGTCTCCTCAG  331
D  100.0% (9/9)     IGHD5-12*01  12   ...----------------------------------------------------------  14
J  95.9% (47/49)    IGHJ2*01     5    ------------...........................A........A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_221279

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            358     4e-101
IGHD3-22*01                                                                                           16.1    2.5   
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GCGGTCGCGACCCTCGCGGGTTTTATTCTGATGC	TAGTGGATATGACT	CTCCTAGGATCTT	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGCGGTCGCGACCCTCGCGGGTTTTATTCTGATGCTAGTGGATATGACTCTCCTAGGATCTTCTACCACTACGGAATGGACGTC	AKGGRDPRGFYSDASGYDSPRIFYHYGMDV	243	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13584  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTGATGATTATGCCATGCACTGGGTCCGGCAAGCTCCGGGGAAGGGCCTGG  90
V  96.0% (239/249)  IGHV3-9*01   47   ....................................C.......................................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  L  S  W  N  S  G  L  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13584  91   AGTGGGTCTCAGGTCTTAGTTGGAATAGTGGTTTAATAGGCTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  96.0% (239/249)  IGHV3-9*01   137  ..............A.................AGC...................................................G...  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  K  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  G  G  R  D  P  R  G  
                    Query_13584  181  AGAAGTCCCTGTATCTGCAAATGAACAGTCTGAGAGCTGAGGACACGGCCCTCTATTACTGTGCAAAAGGCGGTCGCGACCCTCGCGGGT  270
V  96.0% (239/249)  IGHV3-9*01   227  ....C.............................................T.G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       

                                      -------------CDR3-IMGT--------------------------------------->                            
                                      F  Y  S  D  A  S  G  Y  D  S  P  R  I  F  Y  H  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_13584  271  TTTATTCTGATGCTAGTGGATATGACTCTCCTAGGATCTTCTACCACTACGGAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCT  360
D  85.7% (12/14)    IGHD3-22*01  16   -------------......T...T...---------------------------------------------------------------  29
J  96.4% (53/55)    IGHJ6*02     8    ----------------------------------------....T.......T.....................................  57

                                           
                                      S  S 
                    Query_13584  361  CCTCA  365
J  96.4% (53/55)    IGHJ6*02     58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_221278

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           325     3e-91
IGHD5-18*01                                                                                           27.6    8e-04
IGHJ5*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCTACCGGAA	GTGGATACAACTATGGT	AAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCTACCGGAAGTGGATACAACTATGGTAATAACTGGTTCGACCCG	ARDPTGSGYNYGNNWFDP	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	226	18	0	92.6


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  I  V  S  G  A  S  V  S  H  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_13585  4    CCCTGAGACTCTCCTGCATTGTCTCTGGTGCCTCCGTCAGTCATTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAAT  93
V  92.6% (226/244)  IGHV4-59*02  50   .....TCC...A......C...........G..........AG.........................C...................G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  G  G  I  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N  
                    Query_13585  94   GGATTGGATATATCTATTACGGGGGGATCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAACC  183
V  92.6% (226/244)  IGHV4-59*02  140  .......G............A.T....G...........................................G..................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  L  R  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  Y  
                    Query_13585  184  AGTTCTCCCTGAGGCTGAGCTCTCTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGACCCTACCGGAAGTGGATACAACTATG  273
V  92.6% (226/244)  IGHV4-59*02  230  ............A..........G......................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  94.1% (16/17)    IGHD5-18*01  1    ---------------------------------------------------------------------------.........G.....  15

                                      ------------------->                                  
                                      G  N  N  W  F  D  P  W  G  Q  G  T  L  V  T  A  S  S  
                    Query_13585  274  GTAATAACTGGTTCGACCCGTGGGGCCAGGGAACTCTGGTCACCGCCTCCTCAG  327
D  94.1% (16/17)    IGHD5-18*01  16   ..----------------------------------------------------  17
J  93.9% (46/49)    IGHJ5*02     3    -----..............C..............C..........T........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_114324

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           332     3e-93
IGHD2-21*02                                                                                           16.1    2.1  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-21*02	IGHJ4*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACGCGGGATGGCTACAATACCTAT	TGACTGCT	N/A	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  T  Y  Y  W  T  W  I  R  R  P  P  G  K  G  L  E 
                    Query_13586  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGTACTTACTACTGGACCTGGATCCGGCGGCCCCCAGGGAAGGGACTGGAA  90
V  93.4% (228/244)  IGHV4-59*01  49   .......................................A...G...........G...........A.....................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  T  H  Y  S  G  D  T  N  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  T  S  K  N 
                    Query_13586  91   TGGATTGGCTATACTCATTACAGTGGGGACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCATCATATCAGTAGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-59*01  139  ........G....TCT...........AG...................................C.........................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT---------------------------------------------------->                                 
                                       L  L  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  G  M  A  T  I  P  I 
                    Query_13586  181  CTGCTCTCCCTGAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGGACGCGGGATGGCTACAATACCTATT  270
V  93.4% (228/244)  IGHV4-59*01  229  .A.T.........A.......................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD2-21*02  16   -----------------------------------------------------------------------------------------.  16

                                                                            
                                       D  C  W  A  R  E  P  W  S  P  S  P   
                    Query_13586  271  GACTGCTGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  308
D  100.0% (8/8)     IGHD2-21*02  17   .......-------------------------------  23
J  100.0% (31/31)   IGHJ4*02     17   -------...............................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_221276

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            341     5e-96
IGHD6-6*01                                                                                            12.2    32   
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CAAG	TCGTCC	GAAATCGACA	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACAAGTCGTCCGAAATCGACAACTTCTACGGTTTGGACGTC	AKDKSSEIDNFYGLDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  F  G  F  T  F  E  D  Y  A  M  H  W  V  R  Q  G  P  G  K  G  L  
                    Query_13587  1    GGTCCCTGAGACTCTCCTGTGCAGCCTTTGGATTCACGTTTGAAGATTATGCCATGCACTGGGTCCGGCAAGGTCCAGGGAAGGGCCTGG  90
V  93.6% (234/250)  IGHV3-9*01   47   ...........................C.........C.....T............................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  G  C  T  I  A  Y  A  D  S  V  K  G  R  F  T  L  S  R  D  N  A  
                    Query_13587  91   AATGGGTCTCAGGAATTAGTTGGAATGGTTGTACCATAGCCTATGCGGACTCTGTGAAGGGCCGATTCACCCTCTCCAGAGACAACGCCA  180
V  93.6% (234/250)  IGHV3-9*01   137  .G...........T............A..G...G.....G...............................A..................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  S  L  Y  L  Q  M  N  S  L  G  A  D  D  T  A  F  Y  Y  C  A  K  D  K  S  S  E  I  D  
                    Query_13587  181  GGAACTCCCTGTATCTGCAAATGAACAGTCTGGGAGCTGACGACACGGCCTTCTATTATTGTGCAAAAGACAAGTCGTCCGAAATCGACA  270
V  93.6% (234/250)  IGHV3-9*01   227  A...............................A.......G...........G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD6-6*01   13   --------------------------------------------------------------------------......----------  18

                                      T------------------>                                 
                                      N  F  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13587  271  ACTTCTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.2% (51/53)    IGHJ6*02     10   ...A.......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_114326

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHD3-22*01                                                                                           10.3    135   
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	ATCAAGC	GATAG	CCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATAGCCGGACCAAGTACGGTATGGACGTC	VRQSSDSRTKYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  S  Y
                    Query_13588  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCAGTTA  90
V  95.5% (278/291)  IGHV5-51*01  6    ....................................C.......................................AG.........C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  T  G  L  E  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  S  P
                    Query_13588  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGTGGATGGGGATCATCTTTCCGGATGACTCTGATACCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ................................A..........................A...T.G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13588  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  ............................................G.....................C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                           
                                        K  Y  Y  C  V  R  Q  S  S  D  S  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_13588  271  CAAGTATTATTGTGTGAGACAATCAAGCGATAGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  355
V  95.5% (278/291)  IGHV5-51*01  276  ..T......C....C......----------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                   
D  100.0% (5/5)     IGHD3-22*01  11   ----------------------------.....----------------------------------------------------  15
J  100.0% (42/42)   IGHJ6*02     15   -------------------------------------------..........................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_114327

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           321     7e-90
IGHD6-13*01                                                                                           27.6    7e-04
IGHJ2*01                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGACGAG	ATAGCAGCAGCTGG	CTTC	GGTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACGAGATAGCAGCAGCTGGCTTCGGTACTTCGATCTC	AGRDSSSWLRYFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  T  Y  A  M  N  W  V  R  H  T  P  G  K  G  L  
                    Query_13589  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACTTTTAATACCTATGCCATGAACTGGGTCCGCCACACTCCAGGGAAGGGACTGG  90
V  91.8% (225/245)  IGHV3-23*01  47   .....................................C....GC.G...........G............GG.............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  S  I  S  D  S  G  S  G  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  H  S  
                    Query_13589  91   ATTGGGTCTCATCTATTAGTGATAGTGGTAGTGGCACATACTACGCAGACTCCGTGAAGGGCCGATTTACCATCTCCAGAGACCATTCCA  180
V  91.8% (225/245)  IGHV3-23*01  137  .G.........G.........G.......G..A...............................G..C...............A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  G  R  D  S  S  S  W  L  
                    Query_13589  181  AGAACACCCTGTATCTGCAAATGAACAGCCTGAGAGCAGACGACACGGCCGTCTATTACTGTGCGGGACGAGATAGCAGCAGCTGGCTTC  270
V  91.8% (225/245)  IGHV3-23*01  227  .......G.............................C..G...........A............-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (14/14)   IGHD6-13*01  5    ------------------------------------------------------------------------..............----  18

                                      ------------->                                  
                                      R  Y  F  D  L  W  G  R  C  T  L  V  T  V  A  S  
                    Query_13589  271  GGTACTTCGATCTCTGGGGCCGTTGCACCCTGGTCACTGTCGCCTCAG  318
J  95.8% (46/48)    IGHJ2*01     6    .......................G.................T......  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_114320

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           405     4e-115
IGHD6-19*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	TCCTCC	GGGTATATCAGTGGCTGG	GACG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGATCCTCCGGGTATATCAGTGGCTGGGACGACTACAACGCTATGGACGCC	AGSSGYISGWDDYNAMDA	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	5	1	0	83.3
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  F
                    Query_13590  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCTTCAGTAGTTT  90
V  94.8% (274/289)  IGHV1-69*01  6    ....................................................................................C..C.A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  A  L  F  G  I  P  N  Y  A  Q
                    Query_13590  91   TGCTATCAGCTGGGTGCGACAGGCCCCAGGACAAGGGCTTGAGTGGATGGGAGGGATCATCGCTCTCTTTGGAATACCAAACTACGCACA  180
V  94.8% (274/289)  IGHV1-69*01  96   ...........................T.................................C..A.......T.C.G.............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        G  F  Q  G  R  V  M  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_13590  181  GGGGTTCCAGGGCAGAGTCATGATTACCGCGGACGAATCCACGAGCACAGCCTACATGGAGCTGAGCAGCCTAAGATCTGAGGACACGGC  270
V  94.8% (274/289)  IGHV1-69*01  186  .AA.................C...................................................G.................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  G  S  S  G  Y  I  S  G  W  D  D  Y  N  A  M  D  A  W  G  Q  G  T  T  V  T
                    Query_13590  271  CGTCTATTACTGTGCGGGATCCTCCGGGTATATCAGTGGCTGGGACGACTACAACGCTATGGACGCCTGGGGCCAAGGGACCACGGTCAC  360
V  94.8% (274/289)  IGHV1-69*01  276  ...G............A..-----------------------------------------------------------------------  294
                                        V  Y  Y  C  A  R                                                                        
D  94.4% (17/18)    IGHD6-19*01  1    -------------------------.......G..........-----------------------------------------------  18
J  94.3% (50/53)    IGHJ6*02     10   -----------------------------------------------.....T...G........T........................  52

                                                
                                        V  S  S 
                    Query_13590  361  CGTCTCCTCA  370
J  94.3% (50/53)    IGHJ6*02     53   ..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_221271

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           394     7e-112
IGHD1-26*01                                                                                           19.9    0.17  
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GGG	GGGAGCTACT	CTCCTTTT	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGGGGGGAGCTACTCTCCTTTTTGCTTTTGATATC	VKGGATLLFAFDI	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	270	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  S  A  S  G  F  T  F  N  M  Y
                    Query_13591  1    GCAGCTGGTGCAGTCTGGAGGAGGCTTGGTCCAGCCTGGGGGGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTCACCTTCAATATGTA  90
V  93.8% (270/288)  IGHV3-64*05  6    ..........G.......G................................................................G..GC..  95
                                        Q  L  V  E  S  G  G  G  L  V  Q  P  G  G  S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  M  H  W  V  R  Q  A  P  G  K  G  L  E  S  V  S  S  I  T  S  N  A  E  S  T  Y  Y  T  D
                    Query_13591  91   TGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTAGAATCTGTCTCCTCTATTACTAGTAATGCGGAGAGCACATACTACACAGA  180
V  93.8% (270/288)  IGHV3-64*05  96   .......................................G....A...T..AG......G........G..GT............G....  185
                                        A  M  H  W  V  R  Q  A  P  G  K  G  L  E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  V  K  D  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  S  S  L  R  P  E  D  T  A
                    Query_13591  181  CTCAGTGAAGGACAGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTATCTTCAAATGAGCAGTCTGAGACCTGAGGACACGGC  270
V  93.8% (270/288)  IGHV3-64*05  186  ...........G...........................................G....................G.............  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  V  K  G  G  A  T  L  L  F  A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_13591  271  TGTGTATTACTGTGTGAAGGGGGGAGCTACTCTCCTTTTTGCTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  356
V  93.8% (270/288)  IGHV3-64*05  276  ..................--------------------------------------------------------------------  293
                                        V  Y  Y  C  V                                                                       
D  100.0% (10/10)   IGHD1-26*01  9    ---------------------..........-------------------------------------------------------  18
J  97.9% (46/47)    IGHJ3*02     4    ---------------------------------------............................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_114323

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           305     3e-85
IGHD3-10*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGG	CCGAAGGTACCT	TGGGTCGGGGAG	ATTTATACCGTTTTCG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCGAAGGTACCTTGGGTCGGGGAGATTTATACCGTTTTCGGACTAT	ARGRRYLGSGRFIPFSDY	237	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	26	25	23	2	0	92
CDR1-IMGT	27	50	24	20	4	0	83.3
FR2-IMGT	51	101	51	47	4	0	92.2
CDR2-IMGT	102	122	21	17	4	0	81
FR3-IMGT	123	236	114	105	9	0	92.1
CDR3-IMGT (germline)	237	244	8	7	1	0	87.5
Total	N/A	N/A	243	219	24	0	90.1


Alignments

                                      <-------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT------------
                                        L  S  L  T  C  E  V  Y  G  G  S  F  N  N  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E  R
                    Query_13592  2    CCTGTCCCTCACCTGCGAAGTCTATGGTGGGTCCTTCAATAATTACTTCTGGAACTGGATCCGCCAGCCCCCAGGAAAGGGTCTGGAGCG  91
V  90.1% (219/243)  IGHV4-34*01  51   .................CT...................G.GG.....A.....G.....................G.....G......T.  140
                                        L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  W

                                      ---------><-----CDR2-IMGT-----><----------------------------------------------------FR3-IM
                                        I  G  E  V  S  H  S  G  N  T  N  Y  N  L  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N  Q
                    Query_13592  92   GATTGGGGAAGTCAGTCATAGTGGCAACACCAACTACAACCTGTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAACCA  181
V  90.1% (219/243)  IGHV4-34*01  141  ..........A...A.........A.G..............C............................G...................  230
                                        I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  Q

                                      GT----------------------------------------------------><----------------------CDR3-IMGT---
                                        Y  S  L  N  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  Y  L  G  S  G  R  F
                    Query_13592  182  GTACTCCCTGAACCTGGCTTCTGTGACCGCCGCGGACACGGCTGTCTACTACTGTGCGAGGGGCCGAAGGTACCTTGGGTCGGGGAGATT  271
V  90.1% (219/243)  IGHV4-34*01  231  ..T.........G...AGC..........................G..T...........A..---------------------------  293
                                        F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                           
D  91.7% (11/12)    IGHD3-10*01  10   ---------------------------------------------------------------------------...T........---  21

                                      ------------------>                                  
                                        I  P  F  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13592  272  TATACCGTTTTCGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  97.5% (39/40)    IGHJ4*02     9    -------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_229468

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           302     3e-84
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	218	25	0	89.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E  
                    Query_13593  4    CCCTGAGACTCTCCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAGT  93
V  89.7% (218/243)  IGHV4-59*01  50   .....TCC...A................T..........G.AG.T............................A...A............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N  
                    Query_13593  94   GGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAATG  183
V  89.7% (218/243)  IGHV4-59*01  140  ..A....G...........C..T.....C..C..C.......................A..........................G..CC  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y  
                    Query_13593  184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTACT  273
V  89.7% (218/243)  IGHV4-59*01  230  ..............................CT..............G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  94.1% (16/17)    IGHD2-2*01   8    --------------------------------------------------------------------........T........-----  24
J  88.5% (46/52)    IGHJ6*02     11   -------------------------------------------------------------------------------------.....  15

                                      ------------->                                 
                                      Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_13593  274  ACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  320
J  88.5% (46/52)    IGHJ6*02     16   ..GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_69908

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-2*01                                                                                         322     2e-90
IGHD2-2*01                                                                                            35.3    4e-06
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-2*01	IGHD2-2*01	IGHJ6*02	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGGGGGAG	TATTGTAGTAGTACCAACTGC	ATG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGGGGGAGTATTGTAGTAGTACCAACTGCATGTACGGTCTGGACGTC	ARGGGVL**YQLHVRSGR	244	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	227	21	0	91.5


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  D  I  Y  S  W  N  W  I  R  Q  P  P  G  M  G 
                    Query_13594    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCTCCAGTGATATTTACTCCTGGAACTGGATCCGGCAGCCACCAGGGATGGGC  90
V  91.5% (227/248)  IGHV4-30-2*01  49   .......................................AG.....G.GG...........G.......................A....  138
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  V  G  H  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  R  S 
                    Query_13594    91   CTGGAGTGGGTTGGCCACATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCCAGAGTCGAGTCACCATCTCAGTTGACAGGTCC  180
V  91.5% (227/248)  IGHV4-30-2*01  139  .........A....GT..................G......................A................A.....A.........  228
                                         L  E  W  I  G  Y  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  K  H  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  G  V  L  *  * 
                    Query_13594    181  AAGAAACACTTCTCGTTGAGGCTGACCTCTGTGACCGCCGCGGACACGGCCGTCTATTACTGTGCCAGGGGGGGGGGAGTATTGTAGTAG  270
V  91.5% (227/248)  IGHV4-30-2*01  229  .....C..G.....CC...A.....G...........................G..............----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  95.2% (20/21)    IGHD2-2*01     5    -------------------------------------------------------------------------------...........  15

                                        -IMGT---------------------->                                 
                                         Y  Q  L  H  V  R  S  G  R  L  G  P  R  D  H  G  H  R  L  L  
                    Query_13594    271  TACCAACTGCATGTACGGTCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  331
D  95.2% (20/21)    IGHD2-2*01     16   .....G....---------------------------------------------------  25
J  97.9% (47/48)    IGHJ6*02       15   -------------......A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_69906

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            305     3e-85
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCCACGGGCTC	AGCAGTGGC	GATGACTCTGTTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCCACGGGCTCAGCAGTGGCGATGACTCTGTTTATGACTAC	VVHGLSSGDDSVYDY	241	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	16	5	0	76.2
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	241	1	1	0	0	100
Total	N/A	N/A	241	218	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  R  V  S  G  G  S  I  S  D  S  H  W  W  N  W  V  R  Q  P  P  G  K  G  L 
                    Query_13595  1    ACCCTGTCCCTCACCTGCCGTGTCTCTGGTGGCTCCATCAGCGACAGTCACTGGTGGAATTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  90.5% (218/241)  IGHV4-4*02   49   ..................GC......................AGT...A.........G...............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  V  F  H  S  G  S  A  K  Y  N  P  S  L  Q  S  R  L  T  M  S  L  D  K  S  R 
                    Query_13595  91   GAGTGGATTGGGGAAGTTTTTCACAGTGGGAGCGCCAAGTACAACCCGTCCCTTCAGAGTCGACTCACCATGTCACTAGACAAGTCTAGG  180
V  90.5% (218/241)  IGHV4-4*02   139  ...............A.C.A...T.........A....C..............CA........G.......A...G..........C.A.  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------CDR3-IMGT---
                                       N  Q  F  S  L  K  L  Q  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  H  G  L  S  S  G  D  D 
                    Query_13595  181  AACCAGTTCTCCCTGAAGCTGCAGTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGTGGTCCACGGGCTCAGCAGTGGCGATGAC  270
V  90.5% (218/241)  IGHV4-4*02   229  .....................AGC.....................................-----------------------------  289
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                               
D  100.0% (9/9)     IGHD6-19*01  7    ---------------------------------------------------------------------------.........------  15

                                      -------------->                                  
                                       S  V  Y  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13595  271  TCTGTTTATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (41/41)   IGHJ4*02     8    --------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_229463

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           313     1e-87
IGHD1-26*01                                                                                           12.2    31   
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGTCAGGGACGACATG	GTGGGA	CCTTAGGTCGCAT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGTCAGGGACGACATGGTGGGACCTTAGGTCGCATTTTGACTAC	VSGTTWWDLRSHFDY	237	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	22	2	0	91.7
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	19	5	0	79.2
FR3-IMGT	123	236	114	110	4	0	96.5
CDR3-IMGT (germline)	237	237	1	1	0	0	100
Total	N/A	N/A	226	213	13	0	94.2


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  A  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 
                    Query_13596  12   TGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGCCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCAGTCATA  101
V  94.2% (213/226)  IGHV3-30*03  64   .............................C....G...G...............................................T...  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  P  E  G  R  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  V 
                    Query_13596  102  TCACCTGAGGGAAGAAATAAGTACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACGCTGTACGTG  191
V  94.2% (213/226)  IGHV3-30*03  154  ...TA...T.....T.....A.................................................................TC..  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------CDR3-IMGT----------------->
                                       Q  M  N  S  L  K  P  E  D  T  A  V  Y  Y  C  V  S  G  T  T  W  W  D  L  R  S  H  F  D  Y 
                    Query_13596  192  CAAATGAACAGCCTGAAACCTGAGGACACGGCTGTGTATTACTGTGTGTCAGGGACGACATGGTGGGACCTTAGGTCGCATTTTGACTAC  281
V  94.2% (213/226)  IGHV3-30*03  244  ................G.G...........................--------------------------------------------  289
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                                              
D  100.0% (6/6)     IGHD1-26*01  7    --------------------------------------------------------------......----------------------  12
J  97.6% (40/41)    IGHJ4*02     6    ---------------------------------------------------------------------------------.........  14

                                                                      
                                       W  G  Q  G  S  L  V  T  V  S  S
                    Query_13596  282  TGGGGCCAGGGAAGCCTGGTCACCGTCTCCTC  313
J  97.6% (40/41)    IGHJ4*02     15   .............C..................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_69904

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           294     6e-82
IGHD3-9*01                                                                                            12.2    31   
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCCCGAGGGTGGCAG	TGACTTGTT	CCTTTCG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATCCCGAGGGTGGCAGTGACTTGTTCCTTTCGTAC	VKDPEGGSDLFLSY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	24	15	6	3	62.5
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	250	221	26	3	88.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  I  F  R  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13597  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGATTTATCTTCAGAAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  88.4% (221/250)  IGHV3-64*05  47   ..................................C.C......T..C...........................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  I  S  T  V  S  R  N  E  Y     T  Y  Y  A  D  S  V  K  G  R  F  S  V  S  R  D  N  S  
                    Query_13597  91   AATCTATTTCGACTGTCAGTAGAAATGAGTATA---CATACTACGCAGACTCAGTGAAGGGCAGATTCTCCGTTTCCAGAGACAACTCCA  177
V  88.4% (221/250)  IGHV3-64*05  137  ...A.G....AG..A.T.....T....G.GG..GCA................................A..A.C...........T....  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  M  L  Y  L  Q  M  S  S  L  R  P  E  D  S  G  V  Y  Y  C  V  K  D  P  E  G  G  S  D  
                    Query_13597  178  AGAACATGCTTTATCTTCAAATGAGCAGTCTGAGACCTGAGGACTCGGGTGTTTATTATTGTGTGAAAGATCCCGAGGGTGGCAGTGACT  267
V  88.4% (221/250)  IGHV3-64*05  227  ......C...G...G....................G........A...C...G.....C...........--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  88.9% (8/9)      IGHD3-9*01   15   -------------------------------------------------------------------------------------.....  19

                                      ------------->                                
                                      L  F  L  S  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13597  268  TGTTCCTTTCGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  313
D  88.9% (8/9)      IGHD3-9*01   20   G...------------------------------------------  23
J  100.0% (35/35)   IGHJ4*02     12   -----------...................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_229461

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           366     2e-103
IGHD3-16*01                                                                                           14.1    7.9   
IGHJ4*02                                                                                              60.3    2e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	CGAGG	GTTTGGG	CTTT	GGCCA	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	245	11	0	95.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  V  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13598  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTACGTCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.7% (245/256)  IGHV3-15*01  47   .......T.............................T......A...C.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  S  D  G  G  T  T  D  Y  T  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_13598  91   AGTGGGTTGGCCGTATTAAAAGCAAAAGTGATGGTGGGACAACAGACTACACTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  95.7% (245/256)  IGHV3-15*01  137  ...........................C......................G.......................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT---------------------------------------------------->                      
                                      D  S  N  S  T  L  F  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  D  E  G  L  G  
                    Query_13598  181  ATTCAAACAGCACGCTGTTTCTGCAAATGAACAGCCTAAAAACCGAGGACACGGCCGTGTATTACTGTACCACAGACGAGGGTTTGGGCT  270
V  95.7% (245/256)  IGHV3-15*01  227  .......A.A........A..................G..............A.......................--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (7/7)     IGHD3-16*01  14   ---------------------------------------------------------------------------------.......--  20

                                                                       
                                      F  G  Q  G  T  L  V  T  V  S  S  
                    Query_13598  271  TTGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (31/31)   IGHJ4*02     18   --...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_69902

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           313     2e-87
IGHD2-15*01                                                                                           35.3    4e-06
IGHJ5*01                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD2-15*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGTG	GGACATTGTGATGGTGGTAGTTGCTACTCC	CAGAAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTTAGAGAAGTGGGACATTGTGATGGTGGTAGTTGCTACTCCCAGAATTGGTTCGACTCC	VREVGHCDGGSCYSQNWFDS	249	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	19	11	0	63.3
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	256	8	6	2	0	75
Total	N/A	N/A	256	228	28	0	89.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  T  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13599  1    GGTCCCTGAGACTCTCCTGTACAACTTCCGGATTCACCTTCGGGGACTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  89.1% (228/256)  IGHV3-49*04  47   .......................G....T...........T..T..T......................................G....  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  R  N  R  Y  G  G  A  G  K  Y  A  A  S  V  K  G  G  F  T  I  S  R  D  
                    Query_13599  91   AATGGGTAGGATTCATTAGGAGGAATCGATACGGAGGGGCAGGAAAATACGCCGCGTCTGTGAAAGGCGGATTCACCATTTCAAGAGATG  180
V  89.1% (228/256)  IGHV3-49*04  137  .G........T........A..C..AGCT..T..T...A..AC.G.......................A..........C..........  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  L  K  S  V  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  V  R  E  V  G  H  C  
                    Query_13599  181  ATCTCAAAAGCGTCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTATTGTGTTAGAGAAGTGGGACATTGTG  270
V  89.1% (228/256)  IGHV3-49*04  227  ..TC.......A....................................................C...AC......--------------  302
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  86.7% (26/30)    IGHD2-15*01  2    --------------------------------------------------------------------------------...T.....A  11

                                      ----CDR3-IMGT------------------------>                                  
                                      D  G  G  S  C  Y  S  Q  N  W  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13599  271  ATGGTGGTAGTTGCTACTCCCAGAATTGGTTCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
D  86.7% (26/30)    IGHD2-15*01  12   G.........C.........----------------------------------------------------  31
J  97.8% (45/46)    IGHJ5*01     6    --------------------------....................A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_229467

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            347     7e-98
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CTCAGATGGCGATTTTG	GCACTGGCTGGTAC	GGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGACTCAGATGGCGATTTTGGCACTGGCTGGTACGGGGGTTTTGACGAC	AKDSDGDFGTGWYGGFDD	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  E  E  H  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13600  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCGAAGAGCATGCCATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGCCTGG  90
V  94.4% (236/250)  IGHV3-9*01   47   ........................................T..T..TT...................G......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  G  T  I  K  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13600  91   AGTGGGTCTCAGGTATTAGTTGGAATAGCGGAACCATAAAGTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-9*01   137  ............................T..T.G....GGC.................................................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  L  Y  Y  C  A  K  D  S  D  G  D  F  G  
                    Query_13600  181  AGAACTCCCTCTATCTGCAAATGAACAGTCTGAGACCTGAGGACACGGCCTTATATTACTGTGCAAAAGACTCAGATGGCGATTTTGGCA  270
V  94.4% (236/250)  IGHV3-9*01   227  ..........G........................G................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD6-19*01  8    ---------------------------------------------------------------------------------------...  10

                                      IMGT--------------------->                                  
                                      T  G  W  Y  G  G  F  D  D  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_13600  271  CTGGCTGGTACGGGGGTTTTGACGACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  330
D  92.9% (13/14)    IGHD6-19*01  11   G..........-------------------------------------------------  21
J  95.3% (41/43)    IGHJ4*02     6    -----------------......T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_229464

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCGGCG	GGCTGG	N/A	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCTGGCAATTGGTTCGACCCC	ARGRRAGNWFDP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  A  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_13601  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTGGGGCTTACTACTGGAGTTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  92.8% (232/250)  IGHV4-31*01  49   .........................................C.....T.G............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  E  R  T  Q  Y  N  P  S  L  K  N  Q  V  T  I  S  G  D  T  S 
                    Query_13601  91   CTGGAGTGGATTGGATACATCTATTACGGTGAGAGGACCCAGTACAACCCGTCCCTCAAGAATCAAGTGACCATATCAGGAGACACGTCT  180
V  92.8% (232/250)  IGHV4-31*01  139  ..............G............A...G...C...T.C...................G..T...T..........T..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       T  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  W 
                    Query_13601  181  ACAAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCTGGCAATTGG  270
V  92.8% (232/250)  IGHV4-31*01  229  .AG................A.................................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD6-19*01  13   -----------------------------------------------------------------------------......-------  18
J  94.0% (47/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------...C...  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  I  L  V  T  V  T  S  
                    Query_13601  271  TTCGACCCCTGGGGCCAGGGAATCCTGGTCACCGTCACCTCAG  313
J  94.0% (47/50)    IGHJ5*02     9    ......................C.............T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_69901

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD1-26*01                                                                                           21.8    0.047 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  V  S  G  Y  S  F  T  N  Y
                    Query_13602  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGTTTCTGGATACAGCTTTACCAACTA  90
V  94.8% (276/291)  IGHV5-51*01  6    .............................A...................................G....................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  S  P
                    Query_13602  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACAGCCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ........G...........................C....................C...................C............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  P  W  A  T  A
                    Query_13602  181  GTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGCCCTGGGCCACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  .......C.....................................C...........G......A...........G...C..A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  T  V
                    Query_13602  271  CATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  94.8% (276/291)  IGHV5-51*01  276  ...G.................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  92.9% (13/14)    IGHD1-26*01  4    -----------------------------..........C...-----------------------------------------------  17
J  96.5% (55/57)    IGHJ6*02     6    ----------------------------------------------.......A....................................  49

                                                   
                                        P  V  S  S 
                    Query_13602  361  CCCCGTCTCCTCA  373
J  96.5% (55/57)    IGHJ6*02     50   .A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_291352

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           353     9e-100
IGHD6-13*01                                                                                           21.8    0.041 
IGHJ3*01                                                                                              89.1    5e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD6-13*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GC	GCAGCTGGTAC	TGATGTAGGC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGCTGGTACTGATGTAGGCGATGCTTTTGATGCC	ARGAAGTDVGDAFDA	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	238	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  L  S  G  G  S  I  S  S  G  G  F  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_13603  1    ACCCTGTCCCTCACCTGCACTCTCTCTGGTGGCTCCATCAGCAGTGGTGGTTTCTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  95.2% (238/250)  IGHV4-31*03  49   .....................G..............................A........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  Y  G  G  S  T  F  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_13603  91   CTGGAGTGGATTGGGTACATCCATTACGGTGGGAGCACCTTCTACAACCCGTCCCTCAAGAGTCGAGTTACCATGTCAGTAGACACGTCT  180
V  95.2% (238/250)  IGHV4-31*03  139  .....................T.....A............A.................................A...............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  S  C  A  R  G  A  A  G  T  D  V 
                    Query_13603  181  AAGAACCAATTCTCCCTGAGGCTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTCCTGTGCGAGAGGCGCAGCTGGTACTGATGTA  270
V  95.2% (238/250)  IGHV4-31*03  229  ........G..........A.....GC...............................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (11/11)   IGHD6-13*01  11   ------------------------------------------------------------------------...........-------  21

                                      ----------------->                                  
                                       G  D  A  F  D  A  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13603  271  GGCGATGCTTTTGATGCCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  98.0% (48/49)    IGHJ3*01     2    ---.............T...................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_162789

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           397     8e-113
IGHD5-18*01                                                                                           12.2    36    
IGHJ5*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGAGC	ACAGCAATG	CCTCGGACGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGATCGGAGCACAGCAATGCCTCGGACGGACTGGTGCGACACC	GRDRSTAMPRTDWCDT	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	69	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	45	6	0	88.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 
                    Query_13604  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACGTTTACCAGTTAT  91
V  93.8% (272/290)  IGHV1-18*01  7    .............................................................................C........C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  G  V  G  W  I  S  T  Y  N  G  D  T  N  H  A  Q 
                    Query_13604  92   GGTATCAGCTGGGTGCGCCAGGCCCCCGGACAGGGGCTTGAGGGGGTGGGGTGGATCAGCACTTACAATGGGGACACAAACCATGCACAG  181
V  93.8% (272/290)  IGHV1-18*01  97   .................A........T.....A.........T..A....A.........G..........TA........T........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  L  T  T  D  T  S  T  S  T  A  Y  M  E  G  R  S  L  R  S  D  D  T  A 
                    Query_13604  182  AAGTTCCAGGGCAGAGTCACCCTGACCACAGACACATCCACGAGCACAGCCTACATGGAGGGGAGGAGCCTGAGATCTGACGACACGGCC  271
V  93.8% (272/290)  IGHV1-18*01  187  ...C.................A......................................CT............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  G  R  D  R  S  T  A  M  P  R  T  D  W  C  D  T  W  G  E  G  T  L  V  T  V  S 
                    Query_13604  272  GTGTATTATTGTGGGAGAGATCGGAGCACAGCAATGCCTCGGACGGACTGGTGCGACACCTGGGGCGAGGGAACCCTGGTCACCGTCTCC  361
V  93.8% (272/290)  IGHV1-18*01  277  ........C....C......----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  88.9% (8/9)      IGHD5-18*01  7    ---------------------------.....T...------------------------------------------------------  15
J  93.6% (44/47)    IGHJ5*02     4    ----------------------------------------------......T....C........C.......................  47

                                         
                                       S 
                    Query_13604  362  TCA  364
J  93.6% (44/47)    IGHJ5*02     48   ...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_291350

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           364     5e-103
IGHD7-27*01                                                                                           14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGTATCGACT	CTGGGGA	N/A	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGTATCGACTCTGGGGAACAACTGGTTCGACCCC	ARQVSTLGNNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	239	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  R  D  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13605  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCGTGACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.6% (239/245)  IGHV4-59*08  49   ..........................................A..T............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_13605  91   TGGATTGGGTATATCTATTACAGTGGGAACACCTACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  97.6% (239/245)  IGHV4-59*08  139  ............................G....A.............................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  V  S  T  L  G  N  N  W 
                    Query_13605  181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACAAGTATCGACTCTGGGGAACAACTGG  270
V  97.6% (239/245)  IGHV4-59*08  229  ...............C.................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD7-27*01  5    ---------------------------------------------------------------------------.......--------  11
J  100.0% (51/51)   IGHJ5*02     1    ----------------------------------------------------------------------------------........  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13605  271  TTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (51/51)   IGHJ5*02     9    ...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_291357

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           339     2e-95
IGHJ3*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	N/A	AGCGAGGGCCTGCCTGGCACAC	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCGAGGGCCTGCCTGGCACACTGCTTTTGATATC	AKRGPAWHTAFDI	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	229	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13606  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTCGTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.0% (229/241)  IGHV4-59*08  49   ...........................................G..AC.......G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  N  S  G  N  T  N  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13606  91   TGGATTGGGTATATCTTTAACAGTGGGAACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.0% (229/241)  IGHV4-59*08  139  ................A.T.........G.......................A.....................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  K  R  G  P  A  W  H  T  A  F 
                    Query_13606  181  CAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCCGTATATTATTGTGCGAAGCGAGGGCCTGCCTGGCACACTGCTTTT  270
V  95.0% (229/241)  IGHV4-59*08  229  ..............G....G...........................G.....C.......-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
J  100.0% (47/47)   IGHJ3*02     4    -----------------------------------------------------------------------------------.......  10

                                      ----->                                  
                                       D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13606  271  GATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  310
J  100.0% (47/47)   IGHJ3*02     11   ........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_291356

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           436     1e-124
IGHD2-8*02                                                                                            14.1    9.5   
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGT	TACTGGT	ACCAACGCCAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTC	ARLVTGTNATYGLDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  S  Y
                    Query_13607  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAGCTA  90
V  98.3% (284/289)  IGHV5-51*03  6    .................................................................G........................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  R  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_13607  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGAGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*03  96   ........G..................................T..............................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13607  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*03  186  ...................................A.........C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  L  V  T  G  T  N  A  T  Y  G  L  D  V  W  G  Q  G  S  K  V  T  V  S  S
                    Query_13607  271  CATGTATTACTGTGCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTCTGGGGCCAAGGGAGCAAGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*03  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD2-8*02   10   ------------------------.......-----------------------------------------------------------  16
J  93.9% (46/49)    IGHJ6*02     14   ------------------------------------------.......A.....................C..C...............  61

                                       
                                       
                    Query_13607  361  A  361
J  93.9% (46/49)    IGHJ6*02     62   .  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_291355

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           294     6e-82
IGHD4-17*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GACG	TACGGTGAC	CCTACACTCCCA	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGACGTACGGTGACCCTACACTCCCATACTTTGACTCT	ARTYGDPTLPYFDS	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	22	8	0	73.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	99	15	0	86.8
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  M  S  S  G  G  Y  L  W  S  W  I  R  Q  N  P  G  K  G 
                    Query_13608  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCTATGAGCAGTGGCGGCTATCTCTGGAGCTGGATCCGCCAAAACCCAGGGAAGGGC  90
V  87.9% (218/248)  IGHV4-31*03  49   ...............................G...C..C........T..T..CTA..................GC..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  T  S  Y  Y  S  P  S  L  K  R  R  L  T  I  S  V  G  T  S 
                    Query_13608  91   CTGGAGTGGATTGGGAGCATCTATTACAGTGGAACCTCCTACTACAGCCCGTCCCTCAAGAGGCGACTTACAATATCAGTAGGCACTTCT  180
V  87.9% (218/248)  IGHV4-31*03  139  ...............TA...............G.G.A.........A...............T...G....C..........A...G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       E  K  H  F  S  L  K  L  T  S  M  T  A  A  D  T  A  I  Y  F  C  A  R  T  Y  G  D  P  T  L 
                    Query_13608  181  GAGAAGCACTTCTCCCTGAAGCTGACCTCTATGACTGCCGCGGACACGGCCATATATTTTTGTGCGAGGACGTACGGTGACCCTACACTC  270
V  87.9% (218/248)  IGHV4-31*03  229  A....C..G................G....G....................G.G....AC........----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (9/9)     IGHD4-17*01  5    ------------------------------------------------------------------------.........---------  13

                                      -------------->                                  
                                       P  Y  F  D  S  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_13608  271  CCATACTTTGACTCTTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  319
J  93.5% (43/46)    IGHJ4*02     3    ---..........AC.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_291354

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           327     8e-92
IGHD3-10*01                                                                                           14.1    7.8  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	N/A	CGGGGAG	GAGGGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGCGGGGAGGAGGGCTTC	ASGEEGF	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	228	19	0	92.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  S  F  S  D  Y  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13609  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGACTCAGCTTCAGTGACTACTATATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.3% (228/247)  IGHV3-11*06  47   ................................T...C...............C....G....A...........................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  R  S  S  T  H  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13609  91   AGTGGGTTTCACATATTAGTAGAAGTAGTACTCACACAAACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.3% (228/247)  IGHV3-11*06  137  ...........T.C........T.......G.T..........C..............................................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  Y  L  Q  M  N  S  L  V  T  D  D  T  A  I  Y  Y  C  A  S  G  E  E  G  F  W  G  
                    Query_13609  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGGTAACCGACGACACGGCTATATATTACTGCGCCAGCGGGGAGGAGGGCTTCTGGGGCC  270
V  92.3% (228/247)  IGHV3-11*06  227  ................................AG.G....G.........G.G........T..G..-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (7/7)     IGHD3-10*01  15   -------------------------------------------------------------------.......----------------  21
J  97.1% (34/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  T  L  V  T  V  S  S  
                    Query_13609  271  AGGGAACCCTGGTCACCGTGTCCTCAG  297
J  97.1% (34/35)    IGHJ4*02     22   ...................C.......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_162783

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           305     3e-85
IGHD1-20*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD1-20*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGATTTGGCA	ATAACTGG	GCCCACTCGAGAG	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGATTTGGCAATAACTGGGCCCACTCGAGAGTACTATGGTTTGGACGTC	ARDDLAITGPTREYYGLDV	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	24	0	0	100
FR2-IMGT	51	101	51	47	4	0	92.2
CDR2-IMGT	102	125	24	22	2	0	91.7
FR3-IMGT	126	239	114	101	13	0	88.6
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	233	214	19	0	91.8


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  D  Y  Y  M  N  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  H  M 
                    Query_13610  15   TGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACATGAACTGGATCCGGCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCACACATG  104
V  91.8% (214/233)  IGHV3-11*01  64   ........................................G.........C.............................T...T....T  153
                                       C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  S  S  G  S  I  I  K  Y  A  D  S  V  E  G  R  F  V  M  S  R  D  N  A  E  N  S  L  Y  L 
                    Query_13610  105  AGTAGTAGTGGTAGTATCATAAAGTATGCAGACTCTGTGGAGGGCCGATTCGTCATGTCCAGGGACAACGCCGAAAACTCACTGTATCTG  194
V  91.8% (214/233)  IGHV3-11*01  154  ................C....T.C..C............A...........AC...C...............A.G...............  243
                                       S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L 

                                      --------------------------------------------><-----------------------CDR3-IMGT------------
                                       Q  M  T  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  D  L  A  I  T  G  P  T  R  E  Y  Y 
                    Query_13610  195  CAAATGACCAGTCTAAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAGAGACGATTTGGCAATAACTGGGCCCACTCGAGAGTACTAT  284
V  91.8% (214/233)  IGHV3-11*01  244  .......A...C..G....................G.................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  100.0% (8/8)     IGHD1-20*01  4    ---------------------------------------------------------------........-------------------  11
J  96.1% (49/51)    IGHJ6*02     12   ------------------------------------------------------------------------------------.....C  17

                                      ----------->                                 
                                       G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13610  285  GGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
J  96.1% (49/51)    IGHJ6*02     18   ...A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_49202

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            341     5e-96
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATC	TAGTAACACCTG	GCACTCGGGGTTTTGGT	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTAGTAACACCTGGCACTCGGGGTTTTGGTTAC	AGHLVTPGTRGFGY	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  T  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_13611  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCACCAGCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  94.3% (232/246)  IGHV4-4*01   49   ........................................G...T................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  N  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  S  N 
                    Query_13611  91   GAGTGGATTGGGGAAATCTATCATGGTGGAAACACCAACTACAACCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAC  180
V  94.3% (232/246)  IGHV4-4*01   139  ........................A....G.G......................A..................................G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  R  L  N  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_13611  181  AACCAGTTCTCCCTGAGGCTGAACTCTCTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATCTAGTAACACCTGGCACTCGG  270
V  94.3% (232/246)  IGHV4-4*01   229  ................A.....G....G...........................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01   13   ----------------------------------------------------------------------.....C..G...--------  24

                                      ----------->                                  
                                       G  F  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13611  271  GGTTTTGGTTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (37/37)   IGHJ4*02     12   ---------.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_291359

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD2-21*01                                                                                           10.3    123   
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TGTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTGTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFVQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_13612  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTTCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (240/248)  IGHV4-31*03  49   ...............................G..C......C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13612  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCT  180
V  96.8% (240/248)  IGHV4-31*03  139  ..................................G.............C......................C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  V  Q  E 
                    Query_13612  181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTTCTCTATTTGTCCAAGAA  270
V  96.8% (240/248)  IGHV4-31*03  229  ..........................C.........................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD2-21*01  22   ---------------------------------------------------------------------------.....----------  26

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_13612  271  AGAGTCTACTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.9% (47/48)    IGHJ4*02     1    -------.....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_49200

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         396     2e-112
IGHD5-12*01                                                                                           10.3    119   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	N/A	GTGGC	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGCGGCCTAC	ARVAAY	264	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	77	27	27	0	0	100
FR2-IMGT	78	128	51	49	2	0	96.1
CDR2-IMGT	129	149	21	20	1	0	95.2
FR3-IMGT	150	263	114	111	3	0	97.4
CDR3-IMGT (germline)	264	269	6	6	0	0	100
Total	N/A	N/A	269	261	8	0	97


Alignments

                                        <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                           G  L  V  K  P  S  E  T  L  S  L  N  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  V  
                    Query_13613    1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCAACTGCGCTGTCTCTGGTTACTCCATCAGCAGTGGTTACTACTGGGGCTGGGTCC  90
V  97.0% (261/269)  IGHV4-38-2*01  26   ................T...................C.................................................A...  115
                                           G  L  V  K  P  S  E  T  L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  

                                        --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                        R  Q  P  P  G  K  G  L  E  W  I  G  I  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  N  S  R  V  
                    Query_13613    91   GGCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGATTATCTACCATAGTGGGAGCACCTACTACAACCCGTCCCTCAACAGTCGAGTCA  180
V  97.0% (261/269)  IGHV4-38-2*01  116  ....................................G......T...................................G..........  205
                                        R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  

                                        ----------------------FR3-IMGT----------------------------------------------------><----CD
                                        T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  
                    Query_13613    181  CCATATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGCTGAACTCTGTTACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGAG  270
V  97.0% (261/269)  IGHV4-38-2*01  206  .............................................G......G....................................-  294
                                        T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  
D  100.0% (5/5)     IGHD5-12*01    10   -----------------------------------------------------------------------------------------.  10

                                        R3-IMGT--->                                  
                                        V  A  A  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_13613    271  TGGCGGCCTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  315
D  100.0% (5/5)     IGHD5-12*01    11   ....-----------------------------------------  14
J  97.4% (37/38)    IGHJ4*02       11   -------.................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_49207

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGCCTAC	ARRIAVANTGHYFAY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_13614  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.8% (277/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_13614  91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_13614  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  A  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13614  271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.8% (277/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  97.9% (47/48)    IGHJ4*02     1    --------------------------------------------.........A....................................  46

                                        
                                        
                    Query_13614  361  AG  362
J  97.9% (47/48)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_49206

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           352     3e-99
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ3*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCAC	GTATCACTATGACAATGGTGGTTATT	GGACCGCGGGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCACGTATCACTATGACAATGGTGGTTATTGGACCGCGGGGGCTTTTGATATC	ARTTYHYDNGGYWTAGAFDI	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	234	9	0	96.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13615  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.3% (234/243)  IGHV4-59*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  F  G  F  I  Y  Y  S  G  S  T  T  Y  N  P  S  L  R  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_13615  91   TGGTTTGGTTTTATCTATTACAGTGGGAGCACCACCTACAACCCTTCCCTCAGGAGTCGAGTCACCATATCAGTCGACACGTCCAAGAAG  180
V  96.3% (234/243)  IGHV4-59*01  139  ...A....G.A.......................A.........C.......A.....................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  T  Y  H  Y  D  N  G  G 
                    Query_13615  181  CAGTTCTCCCTGAAGCTGAGATCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAACCACGTATCACTATGACAATGGTGGT  270
V  96.3% (234/243)  IGHV4-59*01  229  ....................C..........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (22/26)    IGHD3-22*01  1    --------------------------------------------------------------------....T.......T.G.A.....  22

                                      GT------------------------>                                  
                                       Y  W  T  A  G  A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_13615  271  TATTGGACCGCGGGGGCTTTTGATATCTGGGGCCAAGGGACAGTGGTCACCGTCTCTTCAG  331
D  84.6% (22/26)    IGHD3-22*01  23   ....---------------------------------------------------------  26
J  97.8% (45/46)    IGHJ3*02     5    ---------------...........................A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_49205

Length=416
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            453     1e-129
IGHD3-22*01                                                                                           31.5    6e-05 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGGCTAGCCTC	CTATGATAGTACTGGTTAT	CGCCCT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTC	ARDRLASYDSTGYRPYFYYGMDV	291	359	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	24	0	0	100
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	113	1	0	99.1
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	293	3	0	99


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  S  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_13616  3    CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAGTCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACC  92
V  99.0% (293/296)  IGHV1-2*04   1    .....................................AG...................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 
                    Query_13616  93   GGCTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTAT  182
V  99.0% (293/296)  IGHV1-2*04   91   ..........................................................................................  180
                                       G  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 
                    Query_13616  183  GCACAGAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGAC  272
V  99.0% (293/296)  IGHV1-2*04   181  ..........................................................................................  270
                                       A  Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D 

                                      -----------------><-----------------------------CDR3-IMGT----------------------------->   
                                       T  A  V  Y  F  C  A  R  D  R  L  A  S  Y  D  S  T  G  Y  R  P  Y  F  Y  Y  G  M  D  V  W 
                    Query_13616  273  ACGGCCGTGTATTTCTGTGCGAGAGATCGGCTAGCCTCCTATGATAGTACTGGTTATCGCCCTTACTTCTACTACGGTATGGACGTCTGG  362
V  99.0% (293/296)  IGHV1-2*04   271  .............A............----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  94.7% (18/19)    IGHD3-22*01  7    --------------------------------------...........G.......---------------------------------  25
J  98.2% (56/57)    IGHJ6*02     6    ---------------------------------------------------------------....A......................  32

                                                                    
                                       G  Q  G  T  T  V  T  V  S  S 
                    Query_13616  363  GGCCAAGGGACCACGGTCACCGTCTCCTCA  392
J  98.2% (56/57)    IGHJ6*02     33   ..............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40814496


Query= Query_49204

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           363     1e-102
IGHD3-10*01                                                                                           35.3    4e-06 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAAC	TATTACTATGGTTCGGGG	GCCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAACTATTACTATGGTTCGGGGGCCCACTTTGACTAC	ARGNYYYGSGAHFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  F  P  G  K  G 
                    Query_13617  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*01  49   .......................................A...................................CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  C  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 
                    Query_13617  91   CTGGAGTGCATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACCTCT  180
V  96.4% (241/250)  IGHV4-31*01  139  ........G.............................................................................G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  R  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  N  Y  Y  Y  G  S 
                    Query_13617  181  AAGAACCGGTTCTCCCTGAAGTTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGAACTATTACTATGGTTCG  270
V  96.4% (241/250)  IGHV4-31*01  229  .......A.............C...GC...........................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (18/18)   IGHD3-10*01  2    ---------------------------------------------------------------------------...............  16

                                      ----------------->                                  
                                       G  A  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13617  271  GGGGCCCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (18/18)   IGHD3-10*01  17   ...-------------------------------------------------  19
J  100.0% (45/45)   IGHJ4*02     4    -------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_70830

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           297     7e-83
IGHD6-19*01                                                                                           19.9    0.16 
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGCA	TCGTGGTAC	CAGTGGCTGG	CAAACC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATCGTGGTACCAGTGGCTGGCAAACCGATGCTTTTGAGATC	ARHRGTSGWQTDAFEI	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	102	12	0	89.5
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	217	27	0	88.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  D  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_13618  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCAGTGACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  88.9% (217/244)  IGHV4-59*08  50   .....TCC...A....C.......................T...T.............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  S  I  Y  Y  Y  G  G  I  N  Y  N  P  S  F  E  T  R  V  T  I  S  I  H  T  S  R  Q  
                    Query_13618  94   GGATTGCGTCTATCTATTACTATGGGGGCATAAACTACAACCCCTCCTTCGAGACTCGAGTCACCATATCAATACACACGTCCAGGCAGC  183
V  88.9% (217/244)  IGHV4-59*08  140  ......G..A..........AG....A...CC...............C..A...G................G..G.........A.A.C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  S  L  K  L  S  Y  V  T  A  T  D  S  A  V  Y  Y  C  A  R  H  R  G  T  S  G  W  Q  T  
                    Query_13618  184  AGTTCTCTCTGAAGCTGAGCTATGTGACCGCCACAGACTCGGCCGTGTATTACTGTGCGAGGCATCGTGGTACCAGTGGCTGGCAAACCG  273
V  88.9% (217/244)  IGHV4-59*08  230  .......C.............C..........G.....A......................A..--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD6-19*01  9    -------------------------------------------------------------------------..........-------  18
J  98.0% (48/49)    IGHJ3*02     2    -----------------------------------------------------------------------------------------.  2

                                      ------------->                                  
                                      D  A  F  E  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13618  274  ATGCTTTTGAGATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  98.0% (48/49)    IGHJ3*02     3    ..........T.....................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_70831

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           21.8    0.048 
IGHJ6*02                                                                                              104     1e-26 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGTTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTC	ARHGDDSGSYLYYFYGMDV	291	347	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	70	4	0	94.6
CDR1-IMGT	78	101	24	23	1	0	95.8
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	22	2	0	91.7
FR3-IMGT	177	290	114	108	6	0	94.7
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	295	280	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  R  K  V  S  G  Y  S  F  T  
                    Query_13619  4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCCGTAAGGTTTCTGGATACAGCTTTACCA  93
V  94.9% (280/295)  IGHV5-51*01  2    ..G..............................A............................T......G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      N  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  I  R  Y  
                    Query_13619  94   ACTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGTCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATATCAGATACA  183
V  94.9% (280/295)  IGHV5-51*01  92   G...........G...........................C....................C...................C........  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  G  S  L  K  A  S  A  
                    Query_13619  184  GCCCGTCCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGTACCGCCTACCTACAGTGGGGCAGCCTGAAGGCCTCGGCCA  273
V  94.9% (280/295)  IGHV5-51*01  182  ...........C.....................................C...........G......A..................A..  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------------CDR3-IMGT----------------------->                
                                      T  A  I  Y  Y  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  Q  G  T  
                    Query_13619  274  CCGCCATATATTACTGTGCGAGACATGGGGATGATAGTGGGAGTTACCTTTACTACTTCTACGGTATGGACGTCTGGGGCCAAGGGACCA  363
V  94.9% (280/295)  IGHV5-51*01  272  .......G.................-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  92.9% (13/14)    IGHD1-26*01  4    ---------------------------------..........C...-------------------------------------------  17
J  98.2% (56/57)    IGHJ6*02     6    --------------------------------------------------.......A................................  45

                                                       
                                      T  V  T  V  S  S 
                    Query_13619  364  CGGTCACCGTCTCCTCA  380
J  98.2% (56/57)    IGHJ6*02     46   .................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_70832

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            357     1e-100
IGHD3-10*01                                                                                           19.9    0.15  
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	AATCGGGTGGGC	GGTTCGGGGA	TTTGTGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAATCGGGTGGGCGGTTCGGGGATTTGTGGTAC	VKSGGRFGDLWY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	237	9	0	96.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  L  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13620  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTCTTAGCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.3% (237/246)  IGHV3-7*03   47   .........................................AG...............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  T  E  K  K  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13620  91   AGTGGGTGGCCAATATAAAGCAAGATGGTACTGAGAAAAAGTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.3% (237/246)  IGHV3-7*03   137  .............C..............A.G.......T.C.................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K  S  G  G  R  F  G  D  
                    Query_13620  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGTGAAATCGGGTGGGCGGTTCGGGGATT  270
V  96.3% (237/246)  IGHV3-7*03   227  ....................................................G..........C..------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (10/10)   IGHD3-10*01  11   ------------------------------------------------------------------------------..........--  20

                                      ------->                                  
                                      L  W  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13620  271  TGTGGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (37/37)   IGHJ4*02     12   -----.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_70833

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           332     4e-93
IGHD6-19*01                                                                                           21.8    0.042
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCAGCCGTAGTGGTACAGTGG	GTGGCTGGTAC	AGGACACCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCAGCCGTAGTGGTACAGTGGGTGGCTGGTACAGGACACCCTTTTGACTAC	ARDPAVVVQWVAGTGHPFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  R  F  D  F  S  T  H  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13621  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCAGATTCGACTTCAGTACCCATAGTATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.4% (231/250)  IGHV3-21*01  47   ............................TG.....AC........G.T....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  A  Y  T  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13621  91   AGTGGGTCTCATCCATTAGTGGGAGTGGCGCTTACACATTCTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  92.4% (231/250)  IGHV3-21*01  137  ....................A.T...A.TAG.....T..A..................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  D  P  A  V  V  V  Q  
                    Query_13621  181  AGAATTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTATTGTGCGAGAGATCCAGCCGTAGTGGTACAGT  270
V  92.4% (231/250)  IGHV3-21*01  227  ....C.............................................G.G.....C...........--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      W  V  A  G  T  G  H  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13621  271  GGGTGGCTGGTACAGGACACCCTTTTGACTACTGGGGCCAGGGAACCCTTGTCACCGTCTCCTCAG  336
D  100.0% (11/11)   IGHD6-19*01  11   --...........-----------------------------------------------------  21
J  97.7% (42/43)    IGHJ4*02     6    -----------------------..........................G................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_70835

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD2-21*01                                                                                           10.3    122   
IGHJ4*02                                                                                              91.1    1e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTTCT	CTATT	TCTCCAAGAAAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTTCTCTATTTCTCCAAGAAAGAGTCTACTACTTTGACTAC	ARSSLFLQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_13622  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTTCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.8% (240/248)  IGHV4-31*03  49   ...............................G..C......C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13622  91   CTGGAATGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGACACGTCT  180
V  96.8% (240/248)  IGHV4-31*03  139  .....G..........................................C......................C........A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  S  L  F  L  Q  E 
                    Query_13622  181  AAGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTTCTCTATTTCTCCAAGAA  270
V  96.8% (240/248)  IGHV4-31*03  229  ..........................C.........................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD2-21*01  22   ---------------------------------------------------------------------------.....----------  26

                                      GT------------------>                                 
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_13622  271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  324
J  100.0% (47/47)   IGHJ4*02     1    -------...............................................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_70836

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           315     5e-88
IGHD6-13*01                                                                                           18.0    0.62 
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTGGT	CAGCAGCTG	AC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTGGTCAGCAGCTGACTGACTAC	ARDSGQQLTDY	276	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	275	147	111	3	33	75.5
CDR3-IMGT (germline)	276	283	8	8	0	0	100
Total	N/A	N/A	283	244	6	33	86.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  R  G  L  
                    Query_13623  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAGGGGGCTGG  90
V  86.2% (244/283)  IGHV3-21*01  47   ..............................................C..................................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  H  I  Y  Y  G  D  S  V  K  G  R  F  T  Y  Y  A  D  S  V  
                    Query_13623  91   AGTGGGTCTCATCCATTAGTAGTAGTAGTAGTCACATATATTATGGAGACTCAGTGAAGGGCCGATTCACCTATTACGCAGACTCAGTGA  180
V  86.2% (244/283)  IGHV3-21*01  137  ................................T.....---------------------------------..C................  193
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I                                   Y  Y  A  D  S  V  

                                      -----------------FR3-IMGT-----------------------------------------------------------------
                                      K  G  R  F  T  I  S  R  D  D  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  
                    Query_13623  181  AGGGCCGATTCACCATCTCCAGAGACGACGCCAAGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTATATT  270
V  86.2% (244/283)  IGHV3-21*01  194  ..........................A..........................................................G....  283
                                      K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  

                                      ----><-----------CDR3-IMGT----------->                                  
                                      Y  C  A  R  D  S  G  Q  Q  L  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13623  271  ACTGTGCGAGAGATTCTGGTCAGCAGCTGACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
V  86.2% (244/283)  IGHV3-21*01  284  .............-----------------------------------------------------------  296
                                      Y  C  A  R                                                              
D  100.0% (9/9)     IGHD6-13*01  9    --------------------.........-------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_70837

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           425     3e-121
IGHD5-18*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGTGCCGTACT	TGGATACGGCTTTGGTTAC	TGCC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGTGCCGTACTTGGATACGGCTTTGGTTACTGCCTTGGCTAC	AGAVLGYGFGYCLGY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	279	7	0	97.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  E  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_13624  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGAGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  97.6% (279/286)  IGHV5-51*01  6    ......................................G......................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_13624  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGCGACTCTGATACCACATACAGCCC  180
V  97.6% (279/286)  IGHV5-51*01  96   ..................................................................T.............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13624  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  97.6% (279/286)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  G  A  V  L  G  Y  G  F  G  Y  C  L  G  Y  W  G  Q  G  A  L  I  T  V  S  S
                    Query_13624  271  CATGTATTACTGTGCGGGTGCCGTACTTGGATACGGCTTTGGTTACTGCCTTGGCTACTGGGGCCAGGGAGCCCTGATTACCGTCTCCTC  360
V  97.6% (279/286)  IGHV5-51*01  276  ................--------------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                           
D  89.5% (17/19)    IGHD5-18*01  2    ---------------------------.......A...A.......--------------------------------------------  20
J  90.5% (38/42)    IGHJ4*02     7    --------------------------------------------------...A................A.....G.C...........  46

                                        
                                        
                    Query_13624  361  AG  362
J  90.5% (38/42)    IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_70838

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD3-3*01                                                                                            35.3    4e-06
IGHJ6*02                                                                                              102     5e-26


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTTAATCTCCCCTC	GTATTACGATTTTTGGAG	CGGAGGCA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTTAATCTCCCCTCGTATTACGATTTTTGGAGCGGAGGCAACTACTACTACGGTTTGGACGTC	ARLNLPSYYDFWSGGNYYYGLDV	235	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	120	21	18	0	3	85.7
FR3-IMGT	121	234	114	107	7	0	93.9
CDR3-IMGT (germline)	235	239	5	5	0	0	100
Total	N/A	N/A	242	226	13	3	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  A  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13625  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCGCAAGTTACTACTGGAGCTGGATCCGGCAGCCCCCTGGAAAGGGACTGGAG  90
V  93.4% (226/242)  IGHV4-59*08  49   ...............................G.......AGT................................A..G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S     N  Y  N  P  S  L  K  S  R  L  T  M  S  L  D  T  S  K  N 
                    Query_13625  91   TGGATTGGGTATATCTATTACAGTGGGAG---CAACTACAACCCCTCCCTCAAGAGTCGACTCACCATGTCACTAGACACGTCCAAGAAC  177
V  93.4% (226/242)  IGHV4-59*08  139  .............................CAC............................G.......A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------------CDR
                                       Q  F  S  L  N  L  T  S  V  T  A  A  D  S  A  M  Y  Y  C  A  R  L  N  L  P  S  Y  Y  D  F 
                    Query_13625  178  CAGTTCTCCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCCATGTATTACTGTGCGAGGCTTAATCTCCCCTCGTATTACGATTTT  267
V  93.4% (226/242)  IGHV4-59*08  229  ..............G....G...................A.....G................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (18/18)   IGHD3-3*01   1    -----------------------------------------------------------------------------.............  13

                                      3-IMGT----------------------------->                                 
                                       W  S  G  G  N  Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13625  268  TGGAGCGGAGGCAACTACTACTACGGTTTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  336
D  100.0% (18/18)   IGHD3-3*01   14   .....----------------------------------------------------------------  18
J  98.2% (55/56)    IGHJ6*02     7    -------------..............A.........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_70839

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            288     5e-80
IGHD2-2*01                                                                                            12.2    32   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATT	TAGTAACACCTG	GGACTCGGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATTTAGTAACACCTGGGACTCGGGGTTTTGAGTCC	AGHLVTPGTRGFES	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	15	6	0	71.4
FR3-IMGT	127	240	114	101	13	0	88.6
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	215	31	0	87.4


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  I  S  V  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_13626  1    ACCCTGTCCCTCACCTGCACTATCTCTGTTGGCTCCATTACAACCAGTAACTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGTCTG  90
V  87.4% (215/246)  IGHV4-4*01   49   ..................G..G......G.........C.GC.GT................................A........G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  H  H  G  G  A  T  N  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  K  P  R 
                    Query_13626  91   GAGTGGATTGGGGAGATCCATCATGGCGGAGCCACCAACTACAATCCGTCCCTCGAGAGTCGAGTCACCATATCAGTAGACAAGCCCAGA  180
V  87.4% (215/246)  IGHV4-4*01   139  ..............A...T.....A.T..GAG............C.........A.............................T...AG  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  G  S  L  T  S  A  D  T  A  V  Y  F  C  A  G  H  L  V  T  P  G  T  R 
                    Query_13626  181  AATCAGTTCTCCCTGACTCTGGGGTCTCTGACCTCCGCGGACACGGCCGTGTATTTCTGTGCGGGACATTTAGTAACACCTGGGACTCGG  270
V  87.4% (215/246)  IGHV4-4*01   229  ..C.............AG...A.C...G.....G.....................G.......A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  83.3% (10/12)    IGHD2-2*01   13   ----------------------------------------------------------------------.....C..G...--------  24

                                      ----------->                                  
                                       G  F  E  S  W  G  Q  G  T  L  I  T  V  S  S  
                    Query_13626  271  GGTTTTGAGTCCTGGGGCCAGGGAACCCTGATCACCGTCTCCTCAG  316
J  93.0% (40/43)    IGHJ4*02     6    ---.....C.A...................G...............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_283058

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           315     5e-88
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGGG	AGCAATGGCTGG	GGAAGGTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGGGAGCAATGGCTGGGGAAGGTACTATAATTACGGTATGGACGCC	ARGHRGSNGWGRYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	228	17	6	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_13627  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCAGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  90.8% (228/251)  IGHV4-34*01  49   .......................C..T................------....C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S        G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  H  R  G  G  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_13627  91   CTGGAATGGATTGGGGAAATCATTCATCGTGGAGGCACCAACTACAACCCGTCCCTCCAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  90.8% (228/251)  IGHV4-34*01  133  .....G................A....A.....A.......................A................................  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  G  S  N  G 
                    Query_13627  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGGGAGCAATGGC  270
V  90.8% (228/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  R  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_13627  271  TGGGGAAGGTACTATAATTACGGTATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  93.8% (45/48)    IGHJ6*02     15   ------------------.............T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_314353

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           417     6e-119
IGHD3-9*01                                                                                            23.8    0.012 
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCACT	TTACAATATTTTGAC	ACATTACCAACCTC	TGAGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCACTTTACAATATTTTGACACATTACCAACCTCTGAGTAC	ARATLQYFDTLPTSEY	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	9	77	69	68	1	0	98.6
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	19	5	0	79.2
FR3-IMGT	177	290	114	113	1	0	99.1
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	289	278	11	0	96.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  N  V  S  C  K  A  S  G  Y  S  F  T  R  Y 
                    Query_13628  9    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAACGTCTCCTGCAAGGCTTCTGGTTACAGCTTTACCAGGTAC  98
V  96.2% (278/289)  IGHV1-18*04  7    ..................................................G.........................C.........C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  D  W  M  G  W  V  S  A  N  N  G  K  T  N  Y  A  Q 
                    Query_13628  99   GCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGACTGGATGGGATGGGTCAGCGCAAACAATGGTAAAACGAACTATGCACAG  188
V  96.2% (278/289)  IGHV1-18*04  97   .G.......................................G............A.......TT..........C..A............  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_13628  189  AAGTTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  278
V  96.2% (278/289)  IGHV1-18*04  187  ...C......................................................................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------CDR3-IMGT------------------>                              
                                       V  Y  Y  C  A  R  A  T  L  Q  Y  F  D  T  L  P  T  S  E  Y  W  G  Q  G  T  L  V  T  V  S 
                    Query_13628  279  GTGTATTACTGTGCGAGAGCCACTTTACAATATTTTGACACATTACCAACCTCTGAGTACTGGGGCCAGGGAACCCTGGTTACCGTCTCC  368
V  96.2% (278/289)  IGHV1-18*04  277  ...................-----------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                         
D  93.3% (14/15)    IGHD3-9*01   4    ------------------------....G..........---------------------------------------------------  18
J  95.1% (39/41)    IGHJ4*02     8    -----------------------------------------------------...C.......................C.........  44

                                          
                                       S  
                    Query_13628  369  TCAG  372
J  95.1% (39/41)    IGHJ4*02     45   ....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_314352

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD2-2*02                                                                                            23.8    0.011
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGATC	ATTGTAGTGGTTTCAGATGCTATA	ATACAGG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGATCATTGTAGTGGTTTCAGATGCTATAATACAGGCAACTGGTTCGACCCC	AREDHCSGFRCYNTGNWFDP	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  E  W  T  W  V  R  Q  P  P  G  K  G  L  E 
                    Query_13629  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGGCTCCATCAGTAATTACGAGTGGACCTGGGTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.5% (229/245)  IGHV4-59*01  49   .............................T.............G....T.C....G....A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_13629  91   TGGATTGGCTATGTCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGGGTCACCATTTCACTAGACACGTCCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G...A..T...........................................A........A...G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       L  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  D  H  C  S  G  F  R  C 
                    Query_13629  181  CTGTTCTCCCTGAAGCTAAACTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGAGGATCATTGTAGTGGTTTCAGATGC  270
V  93.5% (229/245)  IGHV4-59*01  229  .A...............G.G...........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (20/24)    IGHD2-2*02   6    ----------------------------------------------------------------------........A..AC...C...  25

                                      GT------------------------>                                  
                                       Y  N  T  G  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13629  271  TATAATACAGGCAACTGGTTCGACCCCTGGGGCCAGGGAACCCTAGTCACCGTCTCCTCAG  331
D  83.3% (20/24)    IGHD2-2*02   26   ....---------------------------------------------------------  29
J  98.0% (49/50)    IGHJ5*02     2    -----------.................................G................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_314351

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           307     1e-85
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ5*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGC	ATTATACC	AACTGCCCGGGGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGCATTATACCAACTGCCCGGGGGCTGGTTCGACTCC	AKDALYQLPGGWFDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	103	11	0	90.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	223	27	0	89.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  V  A  G  F  T  F  S  S  Y  D  M  H  W  V  C  Q  A  P  G  K  G  L  
                    Query_13630  1    GGTCCCTGAGACTCTCCTGTTCAGTCGCTGGATTCACCTTCAGTAGTTACGACATGCACTGGGTCTGCCAGGCTCCGGGCAAGGGACTGG  90
V  89.2% (223/250)  IGHV3-30*18  47   ....................G...C.T...................C..T.G.............C..........A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  T  T  I  S  H  D  G  G  N  Q  Y  Y  T  D  F  V  K  G  R  F  V  I  S  R  D  I  S  
                    Query_13630  91   AGTGGGTGACAACTATATCACACGATGGAGGTAATCAATATTATACAGACTTCGTGAAGGGCCGATTCGTCATCTCCAGAGACATTTCCG  180
V  89.2% (223/250)  IGHV3-30*18  137  ........G..GT.......T.T......A.....A....C...G......C................AC..............A....A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  T  L  Y  L  Q  M  N  S  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  A  L  Y  Q  L  P  
                    Query_13630  181  AAAACACACTGTATCTGCAAATGAACAGTCTGAGACCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATGCATTATACCAACTGCCCG  270
V  89.2% (223/250)  IGHV3-30*18  227  .G.....G....................C......G..................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD3-3*01   24   -------------------------------------------------------------------------........---------  31

                                      ---------------->                                  
                                      G  G  W  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13630  271  GGGGCTGGTTCGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.9% (46/47)    IGHJ5*01     5    ----.....................A.........................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_314350

Length=402
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           392     2e-111
IGHD3-3*01                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTCCTG	TACGATTTTTGGAATGGT	CAGCAGTACTTTTTCAAGGGTTTA	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCTGTACGATTTTTGGAATGGTCAGCAGTACTTTTTCAAGGGTTTAGACGTC	ARVLYDFWNGQQYFFKGLDV	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	270	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  R  F  A  N  S
                    Query_13631  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGGTTTGCCAACTC  90
V  93.4% (270/289)  IGHV5-51*01  6    ..................................................A...........................C...A...G..A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  G  P
                    Query_13631  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGAAAAGGCCTGGAGTGGATGGGCGTCATCTACCCTGGTGACTCTGATACCAGATACGGCCC  180
V  93.4% (270/289)  IGHV5-51*01  96   ........G.....................G....................GA.......T........................A....  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  G  L  R  A  S  D  T  A
                    Query_13631  181  GTCCTTCCAGGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTATCTTCACTGGAGCGGCCTGAGGGCCTCGGACACCGC  270
V  93.4% (270/289)  IGHV5-51*01  186  .........A..................................G.........C..G..G......A......A...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------------CDR3-IMGT------------------------>                 
                                        M  Y  F  C  A  R  V  L  Y  D  F  W  N  G  Q  Q  Y  F  F  K  G  L  D  V  W  G  Q  G  T  S
                    Query_13631  271  CATGTATTTCTGTGCGAGAGTCCTGTACGATTTTTGGAATGGTCAGCAGTACTTTTTCAAGGGTTTAGACGTCTGGGGCCAAGGGACTTC  360
V  93.4% (270/289)  IGHV5-51*01  276  ........A..........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  94.4% (17/18)    IGHD3-3*01   5    -------------------------.............G....-----------------------------------------------  22
J  94.9% (37/39)    IGHJ6*02     24   -------------------------------------------------------------------....................CA.  46

                                                      
                                        V  T  V  S  S 
                    Query_13631  361  GGTCACCGTCTCCTCA  376
J  94.9% (37/39)    IGHJ6*02     47   ................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39341808


Query= Query_314357

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           371     6e-105
IGHD6-25*01                                                                                           12.2    31    
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGTTGGGCCC	GCGGCT	N/A	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGTTGGGCCCGCGGCTGGTATGGACGTC	ARDVGPAAGMDV	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  S  M  R  S  G  G  Y  Y  W  S  W  I  R  Q  R  P  G  K  G 
                    Query_13632  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATGAGGAGTGGTGGATACTACTGGAGCTGGATCCGCCAGCGCCCAGGGAAGGGC  90
V  97.2% (244/251)  IGHV4-31*01  49   ...............................G......C..C........T.........................A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  I  D  T  S 
                    Query_13632  91   CTGGAGTGGATTGGGAACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCTAGTTACCATATCAATAGACACGTCT  180
V  97.2% (244/251)  IGHV4-31*01  139  ...............T..............................................................G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  V  G  P  A  A  G 
                    Query_13632  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGTTGGGCCCGCGGCTGGT  270
V  97.2% (244/251)  IGHV4-31*01  229  .......................................................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD6-25*01  11   ---------------------------------------------------------------------------------......---  16
J  100.0% (45/45)   IGHJ6*02     18   ---------------------------------------------------------------------------------------...  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13632  271  ATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  312
J  100.0% (45/45)   IGHJ6*02     21   ..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_314356

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           408     4e-116
IGHD2-2*01                                                                                            23.8    0.012 
IGHJ5*01                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TATG	GGATATTGTAGCAGT	GTCATCTGTGATGGACCT	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATATGGGATATTGTAGCAGTGTCATCTGTGATGGACCTGACTCC	ARHMGYCSSVICDGPDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  T  F  G  T  Y
                    Query_13633  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTGGCACCTA  90
V  94.8% (276/291)  IGHV5-51*01  6    ....................................C........................A...............G....AC..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  E  T  K  Y  S  P
                    Query_13633  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGAGACGAAATACAGTCC  180
V  94.8% (276/291)  IGHV5-51*01  96   ........G..................................................................T..C.G......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  R  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13633  181  GTCCTTCCGAGGCCAGGTCACCATATCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.8% (276/291)  IGHV5-51*01  186  ........A...............C....C...............C............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  M  G  Y  C  S  S  V  I  C  D  G  P  D  S  W  G  H  G  T  L  V  T  V
                    Query_13633  271  CATGTATTACTGTGCGAGACATATGGGATATTGTAGCAGTGTCATCTGTGATGGACCTGACTCCTGGGGCCACGGAACCCTGGTCACCGT  360
V  94.8% (276/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  93.3% (14/15)    IGHD2-2*01   2    -------------------------...........T...--------------------------------------------------  16
J  97.5% (39/40)    IGHJ5*01     12   ----------------------------------------------------------..............A.................  43

                                              
                                        S  S  
                    Query_13633  361  CTCCTCAG  368
J  97.5% (39/40)    IGHJ5*01     44   ........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_314354

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            329     3e-92
IGHD3-3*01                                                                                            37.2    1e-06
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGCGACGTCCGGGTCC	TACGATTTTTGGAGTGGTT	CTGGTACTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGCGACGTCCGGGTCCTACGATTTTTGGAGTGGTTCTGGTACTCTTGACTAC	AREATSGSYDFWSGSGTLDY	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	20	1	0	95.2
FR3-IMGT	127	240	114	103	11	0	90.4
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	229	19	0	92.3


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  T  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_13634  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATTAGTAGTGGTACCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGAAAGGGGCTG  90
V  92.3% (229/248)  IGHV4-4*02   49   ..................G...................C..C...A...A..............................G.........  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  H  S  G  S  T  K  Y  N  T  S  L  R  S  R  V  T  I  S  V  D  R  S  N 
                    Query_13634  91   GAGTGGATTGGAGAAATCTCTCATAGTGGGAGCACCAAGTACAACACGTCCCTCAGGAGTCGAGTCACCATATCAGTAGACAGGTCGAAC  180
V  92.3% (229/248)  IGHV4-4*02   139  ...........G.......A..................C......C.........A..........................A...C..G  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------------CDR3
                                       K  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  T  S  G  S  Y  D 
                    Query_13634  181  AAGCAGTTCTCCCTGAGATTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGAGGCGACGTCCGGGTCCTACGAT  270
V  92.3% (229/248)  IGHV4-4*02   229  ..C.............AGC...G.............................................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (19/19)   IGHD3-3*01   5    ------------------------------------------------------------------------------------......  10

                                      -IMGT------------------------>                                  
                                       F  W  S  G  S  G  T  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_13634  271  TTTTGGAGTGGTTCTGGTACTCTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  334
D  100.0% (19/19)   IGHD3-3*01   11   .............---------------------------------------------------  23
J  97.6% (41/42)    IGHJ4*02     7    ----------------------.....................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_224735

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGACAG	ATTGTCGTAGTCCCCGGTGCTA	C	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGACAGATTGTCGTAGTCCCCGGTGCTACCTACGGTATGGACGTC	ARDRQIVVVPGATYGMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  S  S  S  Y  F  W  T  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_13635  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCAGCAGTAGTTACTTCTGGACTTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  90.6% (222/245)  IGHV4-59*01  49   .....................................T...........A.....GC.................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  D  G  S  G  S  P  R  Y  N  P  S  L  K  S  R  V  T  M  S  L  D  T  S  K  N 
                    Query_13635  91   TGGATTGGCTATGTCGATGGCAGTGGGAGTCCCAGGTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCGCTAGACACGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  ........G...A..T..TA.........CA...AC................................A..AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       R  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  Q  I  V  V  V  P  G 
                    Query_13635  181  CGATTCTCCCTGAGGCTGAATTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGACAGATTGTCGTAGTCCCCGGT  270
V  90.6% (222/245)  IGHV4-59*01  229  .AG..........A.....GC............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  81.8% (18/22)    IGHD2-2*01   6    ------------------------------------------------------------------------.....A.....A..A.C.  23

                                      -------------------->                                 
                                       A  T  Y  G  M  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_13635  271  GCTACCTACGGTATGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  324
D  81.8% (18/22)    IGHD2-2*01   24   ....--------------------------------------------------  27
J  98.0% (48/49)    IGHJ6*02     14   -----...............................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_224734

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-64*05                                                                                           332     3e-93
IGHD1-26*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-64*05	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TATCCTCTATGAC	AGTGGGAGCTAC	ATCGGAAG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGATATCCTCTATGACAGTGGGAGCTACATCGGAAGCTTTGACCAC	VRDILYDSGSYIGSFDH	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	231	19	0	92.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  V  A  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13636  1    GGTCCCTGAGACTCTCCTGTTCAGTCGCTGGATTCACCTTCAGTAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  92.4% (231/250)  IGHV3-64*05  47   ........................C.T...................C...........................................  136
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  H  V  S  S  I  T  G  H  G  D  F  T  Y  Y  A  D  S  V  K  D  R  F  T  I  S  R  D  N  S  
                    Query_13636  91   AACATGTTTCAAGTATTACTGGTCATGGGGATTTCACATACTACGCAGACTCAGTGAAGGACAGATTCACCATCTCCAGAGACAATTCCA  180
V  92.4% (231/250)  IGHV3-64*05  137  ..T........GC.....G.A..A......G.AG..........................G.............................  226
                                      E  Y  V  S  A  I  S  S  N  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  D  T  L  Y  F  Q  M  S  S  L  R  P  E  D  T  A  M  Y  Y  C  V  R  D  I  L  Y  D  S  G  
                    Query_13636  181  AAGACACGCTGTATTTTCAAATGAGCAGTCTGAGACCTGAGGACACGGCTATGTATTACTGTGTGAGAGATATCCTCTATGACAGTGGGA  270
V  92.4% (231/250)  IGHV3-64*05  227  .GA...........G....................G..............G...............A...--------------------  296
                                      K  N  T  L  Y  V  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  K                       
D  100.0% (12/12)   IGHD1-26*01  6    -----------------------------------------------------------------------------------.......  12

                                      GT-------------------->                                  
                                      S  Y  I  G  S  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13636  271  GCTACATCGGAAGCTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (12/12)   IGHD1-26*01  13   .....----------------------------------------------------  17
J  97.7% (43/44)    IGHJ4*02     5    -------------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_314359

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD3-10*01                                                                                           33.4    1e-05
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATGTACCGGGGAGGG	ATTACTTTGGTTCGGGGAGT	CGCACCGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGTACCGGGGAGGGATTACTTTGGTTCGGGGAGTCGCACCGGCTTTGACTAC	ARHVPGRDYFGSGSRTGFDY	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	221	22	0	90.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  K  S  F  F  W  S  W  I  R  Q  S  P  P  K  G  L  E 
                    Query_13637  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAAATCTTTCTTCTGGAGTTGGATCCGGCAGTCCCCACCGAAGGGACTGGAG  90
V  90.9% (221/243)  IGHV4-59*01  49   .............................T..........GTAG..A..A......C............C.....GG.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  Y  V  Y  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  A  D  T  S  K  N 
                    Query_13637  91   TGGCTTGGATATGTCTATGACAGTGGGAGTACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGCAGACACGTCCAAGAAC  180
V  90.9% (221/243)  IGHV4-59*01  139  ...A....G...A.....T..........C.....C.....................................T................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  L  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  H  V  P  G  R  D  Y  F  G 
                    Query_13637  181  CAGCTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTGTATTTCTGTGCGAGACATGTACCGGGGAGGGATTACTTTGGT  270
V  90.9% (221/243)  IGHV4-59*01  229  ...T..............AG................................A..........---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.0% (19/20)    IGHD3-10*01  3    -------------------------------------------------------------------------------......A....  13

                                      GT------------------------>                                  
                                       S  G  S  R  T  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13637  271  TCGGGGAGTCGCACCGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  95.0% (19/20)    IGHD3-10*01  14   .........----------------------------------------------------  22
J  100.0% (44/44)   IGHJ4*02     5    -----------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_224736

Length=419
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           350     1e-98
IGHD2-15*01                                                                                           14.1    10   
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGCAA	TGTAGTG	CTCACTAATAGGCGCGGACTTACGGGGCCAG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCGCAATGTAGTGCTCACTAATAGGCGCGGACTTACGGGGCCAGACTACCACTACTACGGCATGGACGTC	ARERNVVLTNRRGLTGPDYHYYGMDV	284	361	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	64	5	0	92.8
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	257	33	0	88.6


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  T  A  A  G  Y  T  F  S  S  Y 
                    Query_13638  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCGTGCACGGCCGCTGGGTACACCTTTAGTAGTTAT  91
V  88.6% (257/290)  IGHV1-18*01  7    .................................................A......C....A...TT....T..........CC..C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  K  N  G  D  T  K  Y  E  Q 
                    Query_13638  92   AGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCCAAGAACGGAGACACCAAATATGAGCAG  181
V  88.6% (257/290)  IGHV1-18*01  97   G.......C.....................................................TT.C..T..TA....A..C....CA...  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  D  R  I  F  L  T  T  E  T  S  T  S  T  A  Y  M  E  V  T  S  L  R  P  D  D  T  A 
                    Query_13638  182  AAGTTCCAGGACAGAATCTTCCTGACCACAGAGACATCCACGAGTACAGCCTACATGGAGGTGACGAGCCTGAGACCTGACGACACGGCC  271
V  88.6% (257/290)  IGHV1-18*01  187  ...C......G....G..AC.A..........C...........C...............C...G..........T..............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------------------CDR3-IMGT--------------------------------->
                                       V  Y  Y  C  A  R  E  R  N  V  V  L  T  N  R  R  G  L  T  G  P  D  Y  H  Y  Y  G  M  D  V 
                    Query_13638  272  GTCTATTACTGTGCGAGAGAGCGCAATGTAGTGCTCACTAATAGGCGCGGACTTACGGGGCCAGACTACCACTACTACGGCATGGACGTC  361
V  88.6% (257/290)  IGHV1-18*01  277  ..G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (7/7)     IGHD2-15*01  8    --------------------------.......---------------------------------------------------------  14
J  94.9% (56/59)    IGHJ6*02     4    ----------------------------------------------------------------.....T..........T.........  29

                                                                       
                                       W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13638  362  TGGGGCCAAGGGACCACTGTCACCGTCTCCTCA  394
J  94.9% (56/59)    IGHJ6*02     30   .................G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41130072


Query= Query_224731

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           302     3e-84
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAG	GGTCGATAATC	GTGGATAT	CCC	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGGGTCGATAATCGTGGATATCCCGCTTTTGACATC	VRVDNRGYPAFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	220	27	0	89.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  T  S  G  F  V  F  R  D  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13639  1    GGTCCCTGAGACTCTCCTGTGTAACGTCTGGATTCGTCTTCAGAGACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  89.1% (220/247)  IGHV3-33*01  47   .....................C.G...........AC......TAG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  K  E  Y  Y  E  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_13639  91   AGTGGGTGGCAGTTATTTGGTATGATGGAAGTAAGGAATATTATGAAGACTCTGTGAAGGGCCGTTTCACCGTCTCCAGAGACAATTCCA  180
V  89.1% (220/247)  IGHV3-33*01  137  ................A.................TA....C....C......C...........A......A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  D  T  L  Y  L  H  M  N  I  L  K  V  E  D  T  A  V  Y  Y  C  V  R  V  D  N  R  G  Y  P  
                    Query_13639  181  AGGATACCCTGTATCTGCATATGAACATCCTAAAGGTCGAAGACACGGCTGTTTATTACTGTGTGAGGGTCGATAATCGTGGATATCCCG  270
V  89.1% (220/247)  IGHV3-33*01  227  ..A.C..G...........A.......G...G.GA.C...G...........G..........C...-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD5-12*01  1    ------------------------------------------------------------------------------........----  8
J  91.3% (42/46)    IGHJ3*02     5    -----------------------------------------------------------------------------------------.  5

                                      ---------->                                  
                                      A  F  D  I  W  G  Q  G  T  V  V  T  V  S  S  
                    Query_13639  271  CTTTTGACATCTGGGGCCAGGGGACAGTGGTCACCGTCTCCTCAG  315
J  91.3% (42/46)    IGHJ3*02     6    .......T...........A......A.............T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_224730

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           313     1e-87
IGHD2-15*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTAGCCGCCAAGACACGACT	AGGATATTG	AAGATT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTAGCCGCCAAGACACGACTAGGATATTGAAGATT	ARFSRQDTTRILKI	232	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	18	11	10	1	0	90.9
CDR1-IMGT	19	42	24	23	1	0	95.8
FR2-IMGT	43	93	51	49	2	0	96.1
CDR2-IMGT	94	117	24	20	4	0	83.3
FR3-IMGT	118	231	114	107	7	0	93.9
CDR3-IMGT (germline)	232	237	6	6	0	0	100
Total	N/A	N/A	230	215	15	0	93.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  V  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  D  P  G  K  G  L  E  W  V  S  Y  I  
                    Query_13640  8    GTGCAGTCTCTGGATTCACCTTCAGTGACTACTATATGAGCTGGATCCGTCAGGATCCAGGGAAGGGGCTGGAGTGGGTTTCATACATTG  97
V  93.5% (215/230)  IGHV3-11*01  65   ......C...........................C..............C....C..................................A  154
                                         A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      G  N  S  G  G  A  I  Y  Y  A  E  S  V  K  G  R  F  T  I  S  R  D  N  A  K  K  S  L  Y  L  
                    Query_13640  98   GTAATAGTGGTGGTGCCATATACTACGCAGAGTCTGTGAAAGGCCGATTCACCATCTCCAGGGACAACGCCAAGAAGTCACTTTATCTCC  187
V  93.5% (215/230)  IGHV3-11*01  155  ...G.......A..A................C........G...................................C.....G.....G.  244
                                      S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------CDR3-IMGT--------------->    
                                      Q  M  N  S  L  R  A  E  D  T  A  M  Y  Y  C  A  R  F  S  R  Q  D  T  T  R  I  L  K  I  W  
                    Query_13640  188  AAATGAACAGCCTGAGAGCCGAGGACACGGCCATGTATTATTGTGCGAGATTTAGCCGCCAAGACACGACTAGGATATTGAAGATTTGGG  277
V  93.5% (215/230)  IGHV3-11*01  245  ................................G.......C.........----------------------------------------  294
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (9/9)     IGHD2-15*01  1    -----------------------------------------------------------------------.........----------  9
J  100.0% (34/34)   IGHJ4*02     15   --------------------------------------------------------------------------------------....  18

                                                                    
                                      G  Q  G  T  L  V  T  V  S  S  
                    Query_13640  278  GCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (34/34)   IGHJ4*02     19   ..............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_224733

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           386     2e-109
IGHD3-22*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GAATGGGGTA	TATGATAGTGGTGGTTATTA	TAAAGGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGAATGGGGTATATGATAGTGGTGGTTATTATAAAGGTTACTTTGACTAC	ARENGVYDSGGYYKGYFDY	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	269	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  S  T  F  D  T  Y
                    Query_13641  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGGAGCACCTTCGACACCTA  90
V  92.4% (269/291)  IGHV1-69*06  6    ..................G.....................................................AG........AG..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        T  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  L  G  T  P  S  Y  A  Q
                    Query_13641  91   TACTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGAATCATCCCCATACTCGGAACACCAAGCTACGCACA  180
V  92.4% (269/291)  IGHV1-69*06  96   .G......G.............................................G........T..CT.T..T...G...A.........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  R  S  T  S  T  A  Y  M  Y  L  S  G  L  R  S  E  D  T  A
                    Query_13641  181  GAGGTTCCAGGGCAGAGTCACGATTACCGCGGACAGATCCACGAGCACAGCCTACATGTACCTGAGCGGCCTGAGATCTGAGGACACGGC  270
V  92.4% (269/291)  IGHV1-69*06  186  ..A................................A......................G.G......A......................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        V  Y  Y  C  A  R  E  N  G  V  Y  D  S  G  G  Y  Y  K  G  Y  F  D  Y  W  G  Q  G  T  L  V
                    Query_13641  271  CGTCTATTACTGTGCGAGAGAGAATGGGGTATATGATAGTGGTGGTTATTATAAAGGTTACTTTGACTACTGGGGCCAGGGAACCCTGGT  360
V  92.4% (269/291)  IGHV1-69*06  276  ...G.................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  95.0% (19/20)    IGHD3-22*01  8    -------------------------------.........A..........---------------------------------------  27
J  97.8% (45/46)    IGHJ4*02     3    ----------------------------------------------------------................................  34

                                                    
                                        S  V  S  S  
                    Query_13641  361  CTCCGTCTCCTCAG  374
J  97.8% (45/46)    IGHJ4*02     35   .A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_224732

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           347     7e-98
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	C	GGGACTTATGC	CAACTCGCCA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGACTTATGCCAACTCGCCATACTGGTACTTCGATCTC	ASGTYANSPYWYFDL	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_13642  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCGGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*02  49   ...................C...........G.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  T  G  S  A  Y  H  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_13642  91   CTGGAGTGGATTGCGAGTATCTATTATACTGGGAGCGCCTACCACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*02  139  .............G..............G.......A.....T.......G.......................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       N  N  H  F  S  L  Q  L  S  S  V  T  D  A  D  T  A  V  Y  Y  C  A  S  G  T  Y  A  N  S  P 
                    Query_13642  181  AACAACCACTTCTCCCTGCAGCTGAGCTCTGTGACCGACGCAGACACGGCTGTCTATTACTGTGCGAGCGGGACTTATGCCAACTCGCCA  270
V  94.8% (235/248)  IGHV4-39*02  229  ..G...............A..................C...............G..............----------------------  296
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.9% (10/11)    IGHD3-16*01  20   ---------------------------------------------------------------------....G......----------  30

                                      ----------------->                                  
                                       Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_13642  271  TACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  322
J  100.0% (52/52)   IGHJ2*01     2    ....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_340978

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           408     4e-116
IGHD4-17*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGTAGGG	ACGGTGACTAC	GGGGCGGGGCTTGAACAA	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCGTAGGGACGGTGACTACGGGGCGGGGCTTGAACAA	ARERRDGDYGAGLEQ	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	276	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  L  S  S  Y
                    Query_13643  1    GCAGCTGGTGCAGTCTGGGGGAGGCGTGGTCCAGCCTGGGAGGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTAAGTTCCTA  90
V  94.8% (276/291)  IGHV3-33*01  6    ..........G......................................................................C...AG...  95
                                        Q  L  V  E  S  G  G  G  V  V  Q  P  G  R  S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  W  Y  D  G  I  N  K  Y  Y  A  D
                    Query_13643  91   TGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGTCAGTTATATGGTATGATGGAATTAATAAATACTATGCAGA  180
V  94.8% (276/291)  IGHV3-33*01  96   ..G..............................................G.....................G..................  185
                                        G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  V  K  G  R  F  T  I  S  R  D  E  S  R  N  T  M  H  L  Q  M  N  S  L  R  A  E  D  T  A
                    Query_13643  181  CGCCGTGAAGGGCCGATTCACCATCTCCAGAGACGAATCCAGGAACACGATGCATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGC  270
V  94.8% (276/291)  IGHV3-33*01  186  .T................................A.T....A.......C..T.....................................  275
                                        S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        L  Y  Y  C  A  R  E  R  R  D  G  D  Y  G  A  G  L  E  Q  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13643  271  TCTTTATTACTGTGCGAGAGAGCGTAGGGACGGTGACTACGGGGCGGGGCTTGAACAATGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  94.8% (276/291)  IGHV3-33*01  276  .G.G.................---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (11/11)   IGHD4-17*01  6    -----------------------------...........--------------------------------------------------  16
J  100.0% (34/34)   IGHJ4*02     15   ----------------------------------------------------------................................  46

                                        
                                        
                    Query_13643  361  AG  362
J  100.0% (34/34)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_340979

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           394     6e-112
IGHD3-3*01                                                                                            14.1    8.7   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTA	ACGATTT	ACATTAT	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACGATTTACATTATGGTATGGACGTC	ARVNDLHYGMDV	263	298	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	41	4	0	91.1
CDR1-IMGT	47	76	30	30	0	0	100
FR2-IMGT	77	127	51	49	2	0	96.1
CDR2-IMGT	128	148	21	20	1	0	95.2
FR3-IMGT	149	262	114	113	1	0	99.1
CDR3-IMGT (germline)	263	269	7	7	0	0	100
Total	N/A	N/A	268	260	8	0	97


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  S  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R 
                    Query_13644  2    CTGGTGAAACCCACACAGACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATTCGC  91
V  97.0% (260/268)  IGHV4-31*03  31   ........G..TT........................C................................................C...  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R 

                                      ------FR2-IMGT---------------------><-----CDR2-IMGT-----><--------------------------------
                                       Q  H  P  G  K  G  L  E  W  V  G  Y  M  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T 
                    Query_13644  92   CAGCACCCAGGGAAGGGCCTGGAGTGGGTTGGGTACATGTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACC  181
V  97.0% (260/268)  IGHV4-31*03  121  ...........................A..........C...................................................  210
                                       Q  H  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T 

                                      --------------------FR3-IMGT----------------------------------------------------><--------
                                       I  S  V  D  T  S  K  N  Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V 
                    Query_13644  182  ATATCAGTAGACACGTCTAAGAACCAGCTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGTT  271
V  97.0% (260/268)  IGHV4-31*03  211  ...........................T............................................................--  298
                                       I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R    

                                      -----CDR3-IMGT------------>                                 
                                       N  D  L  H  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13644  272  AACGATTTACATTATGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  331
D  100.0% (7/7)     IGHD3-3*01   6    -.......----------------------------------------------------  12
J  100.0% (45/45)   IGHJ6*02     18   ---------------.............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_340976

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           322     2e-90
IGHD6-19*01                                                                                           18.0    0.60 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTAATGGGGGAC	CAGTGGCTG	AGACGTCCACACTTCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTAATGGGGGACCAGTGGCTGAGACGTCCACACTTCCTTGACTCC	ARDLMGDQWLRRPHFLDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	228	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  T  F  S  R  Y  G  L  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13645  1    GGTCCCTGAGACTCTCCTGTTCAGCGTCTGGATTCACCTTCAGTCGCTATGGCTTGCACTGGGTCCGCCAGGCTCCGGGCAAGGGGCTGG  90
V  91.2% (228/250)  IGHV3-33*01  47   ....................G.......................A........A......................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  I  I  S  S  D  G  R  D  E  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13645  91   AGTGGCTGGCAATTATATCGTCTGATGGGAGGGATGAAAACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  91.2% (228/250)  IGHV3-33*01  137  .....G.....G......G..A......A..TA..A..T...................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  H  T  F  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  L  M  G  D  Q  W  
                    Query_13645  181  GGCACACCTTTTTCCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTATTGTGCGAGAGATTTAATGGGGGACCAGTGGC  270
V  91.2% (228/250)  IGHV3-33*01  227  A.A....GC.G.AT....................................G.......C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-19*01  9    -----------------------------------------------------------------------------------.......  15

                                      IMGT--------------------->                                
                                      L  R  R  P  H  F  L  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13645  271  TGAGACGTCCACACTTCCTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  328
D  100.0% (9/9)     IGHD6-19*01  16   ..--------------------------------------------------------  17
J  97.5% (39/40)    IGHJ4*02     7    ------------------......A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_340977

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           406     1e-115
IGHD1-1*01                                                                                            10.3    133   
IGHJ4*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAACG	GGCAGCCCCATATCGCGGC	TTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAACGGGCAGCCCCATATCGCGGCTTGGCTAT	ARGTGSPISRLGY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  A  S  Y
                    Query_13646  1    GCAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCGCCAGCTA  90
V  94.8% (275/290)  IGHV1-46*01  6    ..................G.C.............................................................A.......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  A  G  S  T  N  Y  A  Q
                    Query_13646  91   CTATATACACTGGGTACGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGCTGGTAGCACAAATTACGCACA  180
V  94.8% (275/290)  IGHV1-46*01  96   ......G........G....................................................G...........GC........  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  F  L  D  L  S  S  L  K  S  E  D  T  A
                    Query_13646  181  GAAATTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGTACAGTCTTCTTGGACCTGAGCAGCCTTAAATCTGAGGACACGGC  270
V  94.8% (275/290)  IGHV1-46*01  186  ...G.........................................C.......A.A....G...........G.G...............  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  G  T  G  S  P  I  S  R  L  G  Y  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_13646  271  CGTGTATTACTGTGCGAGAGGAACGGGCAGCCCCATATCGCGGCTTGGCTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  356
V  94.8% (275/290)  IGHV1-46*01  276  ....................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (5/5)     IGHD1-1*01   11   --------------------.....-------------------------------------------------------------  15
J  92.9% (39/42)    IGHJ4*02     7    --------------------------------------------...A...C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_340974

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           300     9e-84
IGHD3-3*01                                                                                            18.0    0.61 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CGCGGCCTGCCACATATGAGTCTGATGGAAGTGCTA	ATTACGATT	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCGCGGCCTGCCACATATGAGTCTGATGGAAGTGCTAATTACGATTCTGACTAC	AKARPATYESDGSANYDSDY	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	27	26	17	9	0	65.4
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	126	24	18	6	0	75
FR3-IMGT	127	240	114	108	6	0	94.7
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	246	219	27	0	89


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  S  L  T  C  E  G  S  G  F  T  F  R  S  Y  A  L  T  W  V  R  Q  P  P  G  K  G  L  E  
                    Query_13647  2    CCCTGTCCCTCACCTGCGAAGGCAGTGGATTCACCTTTAGAAGCTATGCCTTGACCTGGGTCCGCCAGCCTCCAGGGAAGGGGCTGGAGT  91
V  89.0% (219/246)  IGHV3-23*01  50   .....AGA...T....T.C..C.TC...............C.........A...G.............G.....................  139
                                         L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  

                                      ----------><-------CDR2-IMGT------><----------------------------------------------------FR
                                      W  V  S  S  I  G  G  S  G  N  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_13647  92   GGGTCTCAAGTATTGGTGGTAGTGGCAATAATACATACTATGCAGACTCCGTGAAGGGCCGTTTCACCATCTCCAGAGACAATTCCAAGA  181
V  89.0% (219/246)  IGHV3-23*01  140  ........GC....A..........TGG..GC........C....................G............................  229
                                      W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-------------------------CDR3-
                                      N  T  L  H  L  Q  M  N  N  L  R  V  E  D  T  A  V  Y  Y  C  A  K  A  R  P  A  T  Y  E  S  
                    Query_13647  182  ACACGCTGCATCTCCAAATGAACAACCTGAGAGTCGAGGACACGGCCGTATATTACTGTGCGAAAGCGCGGCCTGCCACATATGAGTCTG  271
V  89.0% (219/246)  IGHV3-23*01  230  ........T....G..........G........C................................------------------------  295
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                          

                                      IMGT------------------------>                                  
                                      D  G  S  A  N  Y  D  S  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_13647  272  ATGGAAGTGCTAATTACGATTCTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  334
D  100.0% (9/9)     IGHD3-3*01   3    ------------.........------------------------------------------  11
J  97.6% (40/41)    IGHJ4*02     8    ----------------------...................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_340973

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           296     2e-82
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TCGGGA	TGGCTACAATT	TTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATCGGGATGGCTACAATTTTCTTGACTCC	ARDRDGYNFLDS	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	43	8	0	84.3
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	220	31	0	87.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  L  I  N  G  G  N  Y  W  S  W  I  R  Q  R  P  G  K  E 
                    Query_13648  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCCTCATCAATGGCGGTAACTACTGGAGTTGGATCCGCCAGCGCCCGGGGAAGGAG  90
V  87.6% (220/251)  IGHV4-31*03  49   ...............................G....A...G..G...T...T..........C.............A...A.......GC  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  T  Y  Y  S  G  K  T  Q  Y  N  P  S  L  K  G  R  L  P  I  S  P  D  T  S 
                    Query_13648  91   TTGGAGTGGATTGGCTATACCTATTACAGTGGGAAGACCCAGTACAACCCGTCTCTCAAGGGTCGACTCCCCATATCACCTGACACGTCT  180
V  87.6% (220/251)  IGHV4-31*03  139  C.............G..C.T..............GC...T.C...........C......A.....G.TA........GTA.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  S  A  V  Y  F  C  A  R  D  R  D  G  Y  N  F 
                    Query_13648  181  AAGAACCAGTTCTCCCTGAAGCTGAGTTCTGTGACTGCCGCGGACTCGGCCGTGTATTTCTGTGCGAGGGATCGGGATGGCTACAATTTT  270
V  87.6% (220/251)  IGHV4-31*03  229  ..........................C..................A............A.........A..-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD5-12*01  11   -----------------------------------------------------------------------------.......G...--  21

                                      -------->                                  
                                       L  D  S  W  G  Q  G  I  L  V  P  V  S  S  
                    Query_13648  271  CTTGACTCCTGGGGCCAGGGGATCCTGGTCCCCGTCTCCTCAG  313
J  90.5% (38/42)    IGHJ4*02     7    -......A............A.C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_340970

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           330     1e-92
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCGCCGGGACG	GTGGTAATTAC	CCTA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCGCCGGGACGGTGGTAATTACCCTATTGACTAC	ARPRRDGGNYPIDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	230	19	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  R  T  D  G  Y  Y  W  S  W  I  R  Q  F  P  G  K  G 
                    Query_13649  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGAACTGATGGTTACTACTGGAGCTGGATCCGCCAGTTCCCAGGGAAGGGC  90
V  92.4% (230/249)  IGHV4-31*03  49   .........................................C.G..G............................CA.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  F  I  Y  H  T  G  S  T  Y  Y  T  P  S  V  R  G  R  V  T  M  S  V  D  T  S 
                    Query_13649  91   CTGGAGTGGATTGGGTTCATCTATCACACTGGGAGCACCTACTACACCCCGTCCGTCCGGGGTCGAGTCACCATGTCAGTGGACACGTCT  180
V  92.4% (230/249)  IGHV4-31*03  139  ................A.......T...G.................A.......C..AA.A.......T.....A.....A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  P  R  R  D  G  G  N 
                    Query_13649  181  AAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGACCTCGCCGGGACGGTGGTAAT  270
V  92.4% (230/249)  IGHV4-31*03  229  ...................A.....G...........................G...............---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD3-22*01  18   ----------------------------------------------------------------------------------.....T..  25

                                      -------------->                                  
                                       Y  P  I  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13649  271  TACCCTATTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
D  90.9% (10/11)    IGHD3-22*01  26   ...----------------------------------------------  28
J  100.0% (42/42)   IGHJ4*02     7    -------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_340971

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD3-16*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTGGGGGAGT	CCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTGGGGGAGTCCGGGACAC	ARDDDVWGSPGH	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	110	4	0	96.5
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_13650  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAGT  93
V  93.0% (227/244)  IGHV4-59*01  50   .....TCC...A....C.............G........G....................................G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  H  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_13650  94   GGATTGGTCATATCTACCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  93.0% (227/244)  IGHV4-59*01  140  .......GT.......TT.......G................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  R  L  T  S  V  T  A  A  D  T  G  V  Y  Y  C  A  R  D  D  D  V  W  G  S  P  G  
                    Query_13650  184  AGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTGGGGGAGTCCGGGAC  273
V  93.0% (227/244)  IGHV4-59*01  230  ............A.....G.....................G.C.....................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  94.7% (18/19)    IGHD3-16*01  7    ----------------------------------------------------------------....T..............-------  25

                                      ->                                  
                                      H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13650  274  ACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  309
J  97.2% (35/36)    IGHJ4*02     13   ................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_116814

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           335     4e-94
IGHD3-16*01                                                                                           12.2    32   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	GG	GGGGGA	AAGAATCTCCTAGGAAGTT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGGGGGAAAGAATCTCCTAGGAAGTTACTACTTTGACTAC	GGGKNLLGSYYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	244	1	1	0	0	100
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  T  S  T  S  T  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_13651  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCACCAGCACTAGTACTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  93.9% (229/244)  IGHV4-39*01  49   ...............................G.....T.....G.....G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  G  G  N  T  Y  Y  D  P  S  L  K  N  R  V  T  I  S  V  D  T  S 
                    Query_13651  91   CTGGAGTGGATTGGGAGTATCTATTATGGTGGAAACACCTACTATGACCCGTCCCTGAAGAATCGAGTCACCATTTCCGTAGACACGTCC  180
V  93.9% (229/244)  IGHV4-39*01  139  ...........................A....G.G.........CA..........C....G............A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  N  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  G  G  G  K  N  L  L  G  S 
                    Query_13651  181  AAGAACCAGTTCTCCCTGAACCTGAACTCTGTGACCGCCGCAGACACGGCTGTCTATTACTGTGGGGGGGGAAAGAATCTCCTAGGAAGT  270
V  93.9% (229/244)  IGHV4-39*01  229  ....................G....G...........................G..........--------------------------  292
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                            
D  100.0% (6/6)     IGHD3-16*01  18   ------------------------------------------------------------------......------------------  23

                                      -------------->                                  
                                       Y  Y  F  D  Y  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_13651  271  TACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  319
J  97.9% (47/48)    IGHJ4*02     1    -....................................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_261923

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           327     8e-92
IGHD4-4*01                                                                                            10.3    115  
IGHJ1*01                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD4-4*01	IGHJ1*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	TGACCTAA	ACAGT	CTTCAC	CACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGATGACCTAAACAGTCTTCACCAC	PQMT*TVFTT	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	12	0	0	100
CDR1-IMGT	26	49	24	22	2	0	91.7
FR2-IMGT	50	100	51	51	0	0	100
CDR2-IMGT	101	129	30	26	3	1	86.7
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	239	226	12	1	94.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  D  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I 
                    Query_13652  14   TGTGCAGCCTCTGGGTTCACTTTCAGTGACGCCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGTATT  103
V  94.6% (226/239)  IGHV3-15*01  64   ..............A............A..............................................................  153
                                       C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I 

                                      --------CDR2-IMGT---------><----------------------------------------------------FR3-IMGT--
                                       T  S  K  S  D  G   G  Q  Q  T  S  L  Y  P  W  K  A  D  S  P  S  Q  E  M  I  Q  R  T  R  C
                    Query_13652  104  ACTAGCAAAAGTGATGG-GGGACAACAGACTTCGCTGTACCCGTGGAAGGCAGATTCACCATCTCAAGAGATGATTCAAAGAACACGCTG  192
V  94.6% (226/239)  IGHV3-15*01  154  .AA.......C......T.............A.....C.......A..................................A.........  243
                                       K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L 

                                      --------------------------------------------------><----------CDR3-IMGT--------->         
                                        I  C  K  *  T  A  *  K  A  R  T  Q  P  C  I  I  V  P  Q  M  T  *  T  V  F  T  T  G  A  R
                    Query_13652  193  TATCTGCAAATGAACAGCCTGAAAAGCGAGGACACAGCCGTGTATTATTGTGCCACAGATGACCTAAACAGTCTTCACCACTGGGGCCAG  282
V  94.6% (226/239)  IGHV3-15*01  244  .........................C.....................C...A.......-------------------------------  302
                                       Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                                  
D  100.0% (5/5)     IGHD4-4*01   6    -------------------------------------------------------------------.....------------------  10
J  94.6% (35/37)    IGHJ1*01     16   ------------------------------------------------------------------------------............  27

                                                               
                                        G  P  W  S  P  S  P  Q 
                    Query_13652  283  GGGACCCTGGTCGCCGTCTCCTCAG  307
J  94.6% (35/37)    IGHJ1*01     28   ..C.........A............  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_295983

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           339     2e-95
IGHD5-18*01                                                                                           27.6    8e-04
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCTACCGGAA	GTGGATACAACTATGGT	AAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCTACCGGAAGTGGATACAACTATGGTAATAACTGGTTCGACCCG	ARDPTGSGYNYGNNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  A  S  V  S  H  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13653  1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGCCTCCGTCAGTCATTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  94.3% (231/245)  IGHV4-59*02  49   ...................C...........G..........AG.........................C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  G  G  I  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_13653  91   TGGATTGGATATATCTATTACGGGGGGATCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*02  139  ........G............A.T....G...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  Y 
                    Query_13653  181  CAGTTCTCCCTGAGGCTGAGCTCTCTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGACCCTACCGGAAGTGGATACAACTAT  270
V  94.3% (231/245)  IGHV4-59*02  229  .............A..........G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD5-18*01  1    ----------------------------------------------------------------------------.........G....  14

                                      -------------------->                                  
                                       G  N  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13653  271  GGTAATAACTGGTTCGACCCGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  94.1% (16/17)    IGHD5-18*01  15   ...----------------------------------------------------  17
J  98.0% (48/49)    IGHJ5*02     3    ------..............C..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_295980

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            366     2e-103
IGHD2-15*01                                                                                           12.2    36    
IGHJ6*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD2-15*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCGGGTTACC	GGTAGC	GGCACT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCGGGTTACCGGTAGCGGCACTTACGGTATGGACGTC	ARDRVTGSGTYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	262	28	0	90.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  T  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  S  F  T  N  Y 
                    Query_13654  2    CAGCTGGTGCAGTCTGGGGCTGAGGTGACGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGATACAGCTTCACTAACTAT  91
V  90.3% (262/290)  IGHV1-3*01   7    .....T......................A....................A...T......................C........G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  L  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  E  V  N  G  N  A  R  Y  S  P 
                    Query_13654  92   GCTCTACATTGGGTGCGCCAGGCCCCCGGACAAGGGCTTGAGTGGATGGGATGGATCAACGAGGTCAACGGCAACGCAAGATATTCACCG  181
V  90.3% (262/290)  IGHV1-3*01   97   ...A.G...........................A...........................CT.G...T..T...A...A........A.  186
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  R  D  R  V  T  I  T  R  D  Y  S  A  T  I  A  Y  M  D  L  T  S  L  T  S  E  D  T  A 
                    Query_13654  182  AAGTTCCGGGACAGAGTCACCATTACCAGGGACTATTCCGCGACCATAGCCTACATGGACCTGACCAGCCTGACATCTGAAGACACGGCT  271
V  90.3% (262/290)  IGHV1-3*01   187  .......A..G......................ACA.......G..C............G....G........G................  276
                                       K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                           
                                       V  Y  Y  C  A  R  D  R  V  T  G  S  G  T  Y  G  M  D  V  W  G  Q  G  T  M  V  I  V 
                    Query_13654  272  GTCTATTACTGTGCGAGAGACCGGGTTACCGGTAGCGGCACTTACGGTATGGACGTCTGGGGCCAAGGGACTATGGTCATCGTC  355
V  90.3% (262/290)  IGHV1-3*01   277  ..G.................----------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                   
D  100.0% (6/6)     IGHD2-15*01  17   ------------------------------......------------------------------------------------  22
J  92.9% (39/42)    IGHJ6*02     15   ------------------------------------------.............................C.C.....C....  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_261920

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  N  N  H  A  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13655  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-23*01  47   .....................C....................G..G.T.....A....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  L  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_13655  91   AGTGGGTCTCAGCGATTCTTGGGAGCGGTAGTAGCACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  93.2% (233/250)  IGHV3-23*01  137  .............T...AG...T..T...G..............G......................................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_13655  181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTCTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  93.2% (233/250)  IGHV3-23*01  227  ...............................G....................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  Q  G  T  L  V  T  A  S  S  
                    Query_13655  271  ATTCACCCCTTGACTACTGGGGCCAGGGGACCCTGGTCACCGCCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  95.2% (40/42)    IGHJ4*02     7    ---------...................A.............T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_295986

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-2*04                                                                                            445     2e-127
IGHD2-15*01                                                                                           25.7    0.003 
IGHJ5*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-2*04	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTTATCGATATA	TAGTGATGGTAGCTGC	GACACGGCAGG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTTATCGATATATAGTGATGGTAGCTGCGACACGGCAGGACTGGTTCGACCCC	ARGYRYIVMVAATRQDWFDP	289	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	75	71	70	1	0	98.6
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	51	0	0	100
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	113	1	0	99.1
CDR3-IMGT (germline)	289	295	7	7	0	0	100
Total	N/A	N/A	291	288	3	0	99


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  D  
                    Query_13656  5    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCGACT  94
V  99.0% (288/291)  IGHV1-2*04   5    ...................G...................................................................G..  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  G  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  
                    Query_13656  95   ACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACCCTAACAGTGGTGGCACAAACTATGCAC  184
V  99.0% (288/291)  IGHV1-2*04   95   ..........................................................................................  184
                                      Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  P  N  S  G  G  T  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  
                    Query_13656  185  AGAAGTTTCAGGGCTGGGTCACCATGACCAGGGACACGTCCATCAGCACAGCCTACATGGAGCTGAGCAGGCTGAGATCTGACGACACGG  274
V  99.0% (288/291)  IGHV1-2*04   185  ..........................................................................................  274
                                      Q  K  F  Q  G  W  V  T  M  T  R  D  T  S  I  S  T  A  Y  M  E  L  S  R  L  R  S  D  D  T  

                                      -------------><-------------------------CDR3-IMGT------------------------>                
                                      A  V  Y  Y  C  A  R  G  Y  R  Y  I  V  M  V  A  A  T  R  Q  D  W  F  D  P  W  G  Q  G  T  
                    Query_13656  275  CCGTGTATTATTGTGCGAGAGGTTATCGATATATAGTGATGGTAGCTGCGACACGGCAGGACTGGTTCGACCCCTGGGGCCAGGGAACCC  364
V  99.0% (288/291)  IGHV1-2*04   275  ..........C..........---------------------------------------------------------------------  295
                                      A  V  Y  Y  C  A  R                                                                       
D  93.8% (15/16)    IGHD2-15*01  10   ---------------------------------.....G..........-----------------------------------------  25
J  100.0% (48/48)   IGHJ5*02     4    ------------------------------------------------------------..............................  33

                                                        
                                      L  V  T  V  S  S  
                    Query_13656  365  TGGTCACCGTCTCCTCAG  382
J  100.0% (48/48)   IGHJ5*02     34   ..................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_295987

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           416     2e-118
IGHD2-2*02                                                                                            19.9    0.18  
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAAAGTGGCGGGGA	ACCAGCTGTTATA	AAGAGCGCTG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCC	ARGKWRGTSCYKERCWFDP	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	277	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  S  N  Y
                    Query_13657  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTAGCAACTA  90
V  96.2% (277/288)  IGHV5-51*03  6    .................................................................G...........G.....C..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  G  T  R  Y  R  P
                    Query_13657  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATAATCTATCCTGGTGACTCTGGGACCAGATACAGACC  180
V  96.2% (277/288)  IGHV5-51*03  96   ........G.............................................C...................AT...........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  T  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13657  181  GTCCTTCCAAGGCCAGGTCACCACCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (277/288)  IGHV5-51*03  186  .......................T..................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        M  Y  Y  C  A  R  G  K  W  R  G  T  S  C  Y  K  E  R  C  W  F  D  P  W  G  Q  G  T  L  V
                    Query_13657  271  CATGTATTATTGTGCGAGGGGAAAGTGGCGGGGAACCAGCTGTTATAAAGAGCGCTGCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGT  360
V  96.2% (277/288)  IGHV5-51*03  276  .........C........------------------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                           
D  92.3% (12/13)    IGHD2-2*02   17   ----------------------------------........C....-------------------------------------------  29
J  97.9% (46/47)    IGHJ5*02     5    ---------------------------------------------------------.................................  37

                                                    
                                        N  V  S  S  
                    Query_13657  361  CAACGTCTCCTCAG  374
J  97.9% (46/47)    IGHJ5*02     38   ..C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_261925

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           260     1e-71
IGHD3-16*02                                                                                           27.6    8e-04
IGHJ3*01                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGACCCCACGTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACGATAGC	TTTAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGACCCCACGTATGTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTC	ARGLLIEDPTYVWGSFRRNHDSFNV	238	312	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	42	9	0	82.4
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	93	21	0	81.6
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	205	39	0	84


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  G  T  Y  Y  W  H  W  M  R  Q  P  P  G  R  G  L  E 
                    Query_13658  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGATGCGGCAGCCTCCAGGGAGGGGACTGGAG  90
V  84.0% (205/244)  IGHV4-59*01  49   .......................C.......G.......A...G..........AG......C........C.......A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  L  S  G  D  M  S  R  N 
                    Query_13658  91   TGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCCTGTCAGGAGACATGTCTAGGAAT  180
V  84.0% (205/244)  IGHV4-59*01  139  ...A....G.ATA...AT.A..G..........A..............C...A......A......A.A....T.....C...C.A...C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------------
                                       Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  L  L  I  E  D  P  T  Y 
                    Query_13658  181  CAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACATATTTCTGTGCGAGAGGTCTTCTTATCGAAGACCCCACGTAT  270
V  84.0% (205/244)  IGHV4-59*01  229  .....C.....G..G....G.TC......................GTG....A...........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            

                                      CDR3-IMGT-------------------------------->                                  
                                       V  W  G  S  F  R  R  N  H  D  S  F  N  V  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_13658  271  GTTTGGGGGAGTTTTCGCCGCAATCACGATAGCTTTAATGTCTGGGGCCAAGGGACACCGGTCACCGTCTCTTCAG  346
D  94.1% (16/17)    IGHD3-16*02  14   .............A...-----------------------------------------------------------  30
J  93.0% (40/43)    IGHJ3*01     8    ---------------------------------...G....................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_323776

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           392     2e-111
IGHD3-9*01                                                                                            12.2    35    
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	TATCCTCATGCCCCG	CGATAT	ATCAAGGACCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTATCCTCATGCCCCGCGATATATCAAGGACCTTC	AILMPRDISRTF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	268	17	0	94


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  M  V  S  C  E  A  S  G  G  S  F  N  T  Y
                    Query_13659  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGATGGTCTCCTGCGAGGCTTCTGGAGGCTCCTTCAACACCTA  90
V  94.0% (268/285)  IGHV1-69*01  6    ..................G...............................A..........A..............A......G..G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  M  F  G  T  A  K  Y  A  Q
                    Query_13659  91   TGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGCCTTGAGTGGATGGGAGGGATCATCCCTATGTTTGGTACAGCAAAGTACGCACA  180
V  94.0% (268/285)  IGHV1-69*01  96   ........G...........................G.............................C..............C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  V  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_13659  181  GAAATTTCAGGGAAGAGTCACGGTTACCGCGGACGAATCCACGAGCACTGCCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  94.0% (268/285)  IGHV1-69*01  186  ...G..C.....C.........A.........................A.........................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  F  C  A  I  L  M  P  R  D  I  S  R  T  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13659  271  CGTCTATTTCTGTGCTATCCTCATGCCCCGCGATATATCAAGGACCTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  94.0% (268/285)  IGHV1-69*01  276  ...G....A......--------------------------------------------------------------------  290
                                        V  Y  Y  C  A                                                                    
D  100.0% (6/6)     IGHD3-9*01   7    ------------------------------......-----------------------------------------------  12
J  100.0% (35/35)   IGHJ4*02     14   ------------------------------------------------...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_295988

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           318     5e-89
IGHD3-3*01                                                                                            12.2    31   
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	GAGTGG	CAAGTAGGG	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGGAGTGGCAAGTAGGGGGTTCGACCCC	VRGVASRGFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  F  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13660  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGCAGCTACTTTATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGACTCG  90
V  90.8% (226/249)  IGHV3-74*01  47   ...........................................T.......GG................................G..G.  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  A  A  R  I  R  S  D  G  T  T  T  A  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  V  
                    Query_13660  91   TGTGGGCCGCACGTATTCGGAGTGATGGGACTACCACAGCCTACGCGGACTCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAACGTCA  180
V  90.8% (226/249)  IGHV3-74*01  137  ......T.T........AAT..........G..G....AG........................A......................C..  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  S  T  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  V  R  G  V  A  S  R  G  F  
                    Query_13660  181  AGAGCACACTGTATCTGGAAATGAACAGTCTGAGAGTCGAGGACACGGCTGTGTATTATTGTGTGAGAGGAGTGGCAAGTAGGGGGTTCG  270
V  90.8% (226/249)  IGHV3-74*01  227  ...A...G.........C..................C.....................C....CA....---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-3*01   16   ---------------------------------------------------------------------......---------------  21
J  97.8% (44/45)    IGHJ5*02     7    ------------------------------------------------------------------------------------......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_13660  271  ACCCCTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  309
J  97.8% (44/45)    IGHJ5*02     13   ..........................A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_295989

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           383     1e-108
IGHD1-26*01                                                                                           18.0    0.66  
IGHJ6*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGCCCGGCAGG	GTGGGATCTACT	TG	ACGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTC	ARHGPAGWDLLDAMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	268	23	0	92.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  N  F  N  S  N
                    Query_13661  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGTTCTGGATACAACTTTAACAGTAA  90
V  92.1% (268/291)  IGHV5-51*01  6    ....................................C.............A..........................G.....C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  E  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  R  P
                    Query_13661  91   CTGGATCGGATGGGAGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTACCCTGGTGACTCTGATACCAGATATAGGCC  180
V  92.1% (268/291)  IGHV5-51*01  96   .........C....T.............................................T.......................C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  T  A  D  K  S  T  T  T  A  Y  L  R  W  S  S  L  K  G  S  D  S  A
                    Query_13661  181  GTCCTTCCAAGGCCACGTCACCATTACAGCCGACAAGTCCACCACCACCGCCTACCTGCGGTGGAGCAGCCTGAAGGGCTCGGACTCCGC  270
V  92.1% (268/291)  IGHV5-51*01  186  ...............G........CT...............T..G..............A.................C.......A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        A  Y  Y  C  A  R  H  G  P  A  G  W  D  L  L  D  A  M  D  V  W  G  H  G  A  T  V  S  V  S
                    Query_13661  271  CGCTTATTACTGCGCGAGACATGGCCCGGCAGGGTGGGATCTACTTGACGCTATGGACGTCTGGGGCCACGGGGCCACGGTCTCCGTCTC  360
V  92.1% (268/291)  IGHV5-51*01  276  .ATG........T........---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (11/12)    IGHD1-26*01  7    ---------------------------------......G.....---------------------------------------------  18
J  91.5% (43/47)    IGHJ6*02     16   -----------------------------------------------...G..................A...A........A.......  58

                                          
                                        S 
                    Query_13661  361  CTCA  364
J  91.5% (43/47)    IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_254815

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           318     5e-89
IGHJ3*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  P  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_13662  1    ACCCTGTCCCTCACCTGCACTGTCCCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*02  49   ........................T......G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_13662  91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.4% (224/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_13662  181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.4% (224/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  88.0% (44/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  L  S  S  
                    Query_13662  271  GGCCCAGGGACAATGGTCACCTTGTCTTCAG  301
J  88.0% (44/50)    IGHJ3*02     20   ....A................G.C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_45874

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           341     5e-96
IGHD6-19*01                                                                                           27.6    8e-04
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CAGATATCTCC	TAGCAGTGGCTGGT	CAACACCTCTA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAGATATCTCCTAGCAGTGGCTGGTCAACACCTCTATTTGACTAC	ARQISPSSGWSTPLFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	233	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  T  Y  T  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_13663  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAGTACCTATACCATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (233/248)  IGHV3-21*01  47   ....................G........................G.....G....A.................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  S  F  I  N  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13663  91   AGTGGGTCTCATCCATCAGTAGTAGAGGTAGTTTCATAAATTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (233/248)  IGHV3-21*01  137  ................T........TA......A....T.C............G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  S  L  Y  L  Q  I  S  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  Q  I  S  P  S  S  G  
                    Query_13663  181  AGAACTCACTGTATCTGCAAATAAGCAGCCTGAGAGGCGAGGACACGGCTGTTTATTACTGTGCGAGACAGATATCTCCTAGCAGTGGCT  270
V  94.0% (233/248)  IGHV3-21*01  227  ......................G.A...........C...............G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (14/14)   IGHD6-19*01  6    -------------------------------------------------------------------------------...........  16

                                      GT-------------------->                                  
                                      W  S  T  P  L  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13663  271  GGTCAACACCTCTATTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (14/14)   IGHD6-19*01  17   ...------------------------------------------------------  19
J  100.0% (43/43)   IGHJ4*02     6    --------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_45876

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           335     4e-94
IGHD2-15*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CTCATGGTCCCAATCCGACCTTATGGG	AGTGGTGG	CAGATCTTCA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTCATGGTCCCAATCCGACCTTATGGGAGTGGTGGCAGATCTTCATGACTCC	ARDSWSQSDLMGVVADLHDS	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  N  Y  G  M  H  W  V  R  Q  A  P  V  K  G  L  
                    Query_13664  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATTTTCAGTAATTATGGCATGCACTGGGTCCGCCAGGCTCCAGTCAAGGGGCTGG  90
V  92.8% (232/250)  IGHV3-30*03  47   ....................................CC.......GC...............................G...........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  Y  D  G  N  N  K  F  Y  G  D  S  V  K  D  R  F  T  I  S  R  D  N  S  
                    Query_13664  91   AGTGGCTGGCAGTTATTTCATATGATGGAAATAATAAATTCTATGGAGACTCTGTGAAGGACCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-30*03  137  .....G..........A.............G........A.....C......C.......G.............................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  T  L  Y  L  H  M  N  T  L  R  P  E  D  T  G  V  Y  Y  C  A  R  D  S  W  S  Q  S  D  
                    Query_13664  181  AGAACACGCTATATCTGCACATGAACACCCTGAGACCTGAGGACACGGGTGTCTATTACTGTGCGAGAGACTCATGGTCCCAATCCGACC  270
V  92.8% (232/250)  IGHV3-30*03  227  ..........G........A.......G.......G............C...G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      R3-IMGT------------------------>                                  
                                      L  M  G  V  V  A  D  L  H  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13664  271  TTATGGGAGTGGTGGCAGATCTTCATGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  100.0% (8/8)     IGHD2-15*01  11   -------........---------------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    -------------------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_254814

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           299     2e-83
IGHD3-16*01                                                                                           12.2    32   
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGAGA	GGGGG	TGGGGG	GGCCCCGGTAT	TACGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGAGGGGGTGGGGGGGCCCCGGTATTACGCTATGGACGTC	AGEGVGGPRYYAMDV	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	218	27	0	89


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  A  S  M  S  D  F  Y  W  S  W  L  R  Q  P  P  G  K  A  L  E 
                    Query_13665  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGCTTCCATGAGTGACTTCTACTGGAGTTGGCTCCGGCAGCCCCCAGGGAAGGCACTGGAG  90
V  89.0% (218/245)  IGHV4-59*01  49   ..................A............GC.....C...AGT.A.........C...A.....................G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  S  T  N  H  N  P  S  L  R  N  R  V  T  I  S  V  D  R  S  K  N 
                    Query_13665  91   TGGATTGGGTACATCTATTACACTGGGAGTACCAACCACAATCCCTCCCTCAGGAATCGAGTCACCATTTCAGTAGACAGGTCCAAGAAC  180
V  89.0% (218/245)  IGHV4-59*01  139  ...........T..........G......C......T....C..........A..G............A..........C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  G  E  G  V  G  G  P  R  Y  Y 
                    Query_13665  181  CAGTTCTCCCTGAAGTTGACTTCTGTGACCGCTGCGGACACGGCCATATATTATTGTGCGGGAGAGGGGGTGGGGGGGCCCCGGTATTAC  270
V  89.0% (218/245)  IGHV4-59*01  229  ...............C...GC........................G.G.....C......A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------......--------------  22
J  97.9% (47/48)    IGHJ6*02     15   ---------------------------------------------------------------------------------------...  17

                                      ----------->                                 
                                       A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13665  271  GCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  315
J  97.9% (47/48)    IGHJ6*02     18   .G...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_45870

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            339     1e-95
IGHD3-10*01                                                                                           10.3    116  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GA	TCGGG	ATGGCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGATCGGGATGGCTCCCTGACTAC	VGGSGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13666  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGTGACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-7*01   47   ....................................C.......AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  E  K  D  G  S  E  K  N  Y  V  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13666  91   AGTGGGTGGCCAACATTGAGAAAGATGGAAGTGAGAAAAACTATGTGGACTCTCTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.6% (233/249)  IGHV3-7*01   137  ................AA..C.................T..............G....................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  A  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  V  G  G  S  G  W  L  P  D  
                    Query_13666  181  AGAACGCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTGTATATTACTGTGTGGGAGGATCGGGATGGCTCCCTGACT  270
V  93.6% (233/249)  IGHV3-7*01   227  .....T.............A...A............C...............G..........C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   -----------------------------------------------------------------------.....--------------  18
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13666  271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_45871

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           16.1    2.3  
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TATG	AGTAGTGG	CTCCGTCCCGGACTACCAGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATATGAGTAGTGGCTCCGTCCCGGACTACCAGCACTACGGAATGGACGTC	ARDMSSGSVPDYQHYGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  H  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13667  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACGTTCAGTACCCATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-33*01  47   .....................................C.......G.T...G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  L  I  W  Y  D  G  S  N  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13667  91   AGTGGGTGGCACTTATATGGTATGATGGAAGTAATAAGTATTACGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-33*01  137  ...........G.........................A..C..T.C............................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      N  N  R  A  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  M  S  S  G  S  V  
                    Query_13667  181  ACAACAGGGCGTATCTGCAGATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTATTGTGCGAGAGATATGAGTAGTGGCTCCGTCC  270
V  93.6% (234/250)  IGHV3-33*01  227  .G....C.CT.........A................................G.....C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-22*01  14   --------------------------------------------------------------------------........--------  21

                                      -IMGT----------------------->                                 
                                      P  D  Y  Q  H  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13667  271  CGGACTACCAGCACTACGGAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
J  98.0% (49/50)    IGHJ6*02     13   ------------.......T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_45872

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           392     2e-111
IGHD6-19*01                                                                                           21.8    0.041 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAG	GGGCG	GCAGTGACTGGTAC	GTTGG	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGGGGCGGCAGTGACTGGTACGTTGGTTGACTAC	TRGAAVTGTLVDY	249	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	113	1	0	99.1
CDR3-IMGT (germline)	249	255	7	7	0	0	100
Total	N/A	N/A	255	253	2	0	99.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13668  1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGGTGATTATGCTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  99.2% (253/255)  IGHV3-49*04  47   ..........................................................................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  A  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_13668  91   AGTGGGTAGGTTTCATTAGAAGCAAAGCTTATGGTGGGACAGCAGAATACGCCGCGTCTGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  99.2% (253/255)  IGHV3-49*04  137  .........................................A................................................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  S  E  D  T  A  V  Y  Y  C  T  R  G  A  A  V  T  
                    Query_13668  181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAAGCGAGGACACAGCCGTGTATTACTGTACTAGAGGGGCGGCAGTGACTG  270
V  99.2% (253/255)  IGHV3-49*04  227  ..........................................C................................---------------  301
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  92.9% (13/14)    IGHD6-19*01  8    --------------------------------------------------------------------------------......G...  17

                                      GT-------------->                                  
                                      G  T  L  V  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13668  271  GTACGTTGGTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  92.9% (13/14)    IGHD6-19*01  18   ....-----------------------------------------------  21
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_45873

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           338     5e-95
IGHD2-8*01                                                                                            10.3    120  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAAA	AGGGGACCGAGC	GGTGT	TCCCCGCCAG	TTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAAGGGGACCGAGCGGTGTTCCCCGCCAGTTTGGCTCC	AKRGPSGVPRQFGS	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  G  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13669  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCGGCAGCTATGGCATGCACTGGGTCCGCCAGGCTCCTGGCAAGGGGCTGG  90
V  93.5% (232/248)  IGHV3-30*18  47   .........................................A.T................................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  L  A  A  I  S  Y  D  G  S  N  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  M  S  
                    Query_13669  91   ATTGGTTGGCAGCTATTTCATATGATGGAAGTAATACATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCCGAGACATGTCCA  180
V  93.5% (232/248)  IGHV3-30*18  137  .G...G......T...A...................A........................................A......AT....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  H  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  R  G  P  S  G  V  P  
                    Query_13669  181  AGCACACCCTCTATCTCCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTTTATTACTGTGCGAAAAGGGGACCGAGCGGTGTTCCCC  270
V  93.5% (232/248)  IGHV3-30*18  227  ..A....G..G.....G...................................G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (5/5)     IGHD2-8*01   17   --------------------------------------------------------------------------------.....-----  21

                                      ------------->                                  
                                      R  Q  F  G  S  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_13669  271  GCCAGTTTGGCTCCTGGGGCCAGGGAACCCTGGTCATCGTCTCGTCAG  318
J  90.7% (39/43)    IGHJ4*02     6    -----....A..A.......................C......C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_254813

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            358     4e-101
IGHD2-2*01                                                                                            18.0    0.62  
IGHJ6*02                                                                                              108     9e-28 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAGCGTTC	CCAGCTGCT	CTGGGGGCGGG	ATTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGAGCGTTCCCAGCTGCTCTGGGGGCGGGATTACTACTACTACTACGTGATGGACGTC	ARVERSQLLWGRDYYYYYVMDV	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13670  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTTAGTAACTACTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-7*03   47   .....................................C.......G...T........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13670  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (239/249)  IGHV3-7*03   137  ......................................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  K  S  L  Y  L  L  I  D  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  V  E  R  S  Q  L  L  
                    Query_13670  181  AGAAATCACTGTATCTCCTAATAGACAGCCTGAGAGTCGAGGACACGGCCGTGTATTACTGTGCGAGAGTGGAGCGTTCCCAGCTGCTCT  270
V  96.0% (239/249)  IGHV3-7*03   227  ....C...........G.A...GA............C................................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD2-2*01   18   -------------------------------------------------------------------------------.........--  26

                                      -CDR3-IMGT--------------------------->                                 
                                      W  G  R  D  Y  Y  Y  Y  Y  V  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13670  271  GGGGGCGGGATTACTACTACTACTACGTGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
J  96.8% (60/62)    IGHJ6*02     1    ---------..................GT..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_45878

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           346     2e-97
IGHD2-21*02                                                                                           18.0    0.61 
IGHJ1*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD2-21*02	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TTCACAGTATTGTGGCGC	TGGCGACTGCTA	CGCCTCC	GCTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATTCACAGTATTGTGGCGCTGGCGACTGCTACGCCTCCGCTGAGTACTTCCAGCAC	ARHSQYCGAGDCYASAEYFQH	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	233	12	0	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  N  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13671  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAACTACTGGAGTTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.1% (233/245)  IGHV4-59*08  49   .............................................T..........C.................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_13671  91   TGGATTGGGTATATCTATTCCAGTGGAAGCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCGCTAGACACGTCCAAGAAC  180
V  95.1% (233/245)  IGHV4-59*08  139  ...................A......G........C...................................AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       H  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  S  Q  Y  C  G  A  G  D 
                    Query_13671  181  CACTTCTCCCTGACCCTGACCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACATTCACAGTATTGTGGCGCTGGCGAC  270
V  95.1% (233/245)  IGHV4-59*08  229  ..G..........AG....G.............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.7% (11/12)    IGHD2-21*02  13   -----------------------------------------------------------------------------------...T...  19

                                      MGT-------------------------->                                  
                                       C  Y  A  S  A  E  Y  F  Q  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13671  271  TGCTACGCCTCCGCTGAGTACTTCCAGCACTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  334
D  91.7% (11/12)    IGHD2-21*02  20   .....-----------------------------------------------------------  24
J  96.2% (50/52)    IGHJ1*01     1    ------------.....A.........................................C....  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_45879

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           311     4e-87
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TATCCAAG	TATGATTA	TAGTGCTTCTTCCGGGGGGGAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTATCCAAGTATGATTATAGTGCTTCTTCCGGGGGGGAGTTTGACTCC	ARVSKYDYSASSGGEFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	224	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  G  W  L  R  Q  A  P  G  T  G  L  
                    Query_13672  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTTAGCAGCTATGCCATGGGCTGGCTCCGCCAGGCTCCAGGGACGGGGCTGG  90
V  90.0% (224/249)  IGHV3-23*01  47   .....................................C..................A.....G..................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  D  G  G  W  P  N  Y  A  D  S  V  R  G  R  F  T  I  S  K  D  N  P  
                    Query_13672  91   AGTGGGTCTCAAGTATAAGTAGTGACGGTGGTTGGCCAAACTACGCAGACTCCGTGAGGGGCCGGTTCACCATCTCCAAGGACAATCCCA  180
V  90.0% (224/249)  IGHV3-23*01  137  ...........GC...T...G..AGT......A.CA..T..................A....................GA......T...  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      R  N  T  L  Y  M  Q  M  N  N  L  R  V  E  D  T  A  V  Y  Y  C  A  R  V  S  K  Y  D  Y  S  
                    Query_13672  181  GGAACACGCTGTATATGCAGATGAACAACCTGAGAGTCGAGGACACGGCCGTATATTACTGTGCGAGAGTATCCAAGTATGATTATAGTG  270
V  90.0% (224/249)  IGHV3-23*01  227  A.............C....A.......G........C.............................A..---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (8/8)     IGHD3-16*01  5    -----------------------------------------------------------------------------........-----  12

                                      IMGT--------------------->                                  
                                      A  S  S  G  G  E  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13672  271  CTTCTTCCGGGGGGGAGTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
J  97.7% (42/43)    IGHJ4*02     6    -----------------.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_109909

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            318     6e-89
IGHD6-19*01                                                                                           18.0    0.57 
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GACAG	GAGCAG	GCAGTGGCT	CAAC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACAGGAGCAGGCAGTGGCTCAACCTTTGCCTAC	ATGAGSGSTFAY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	100	14	0	87.7
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  E  F  V  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13673  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGAATTCGTCTTCAGTTCTTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-7*01   47   .....................C........G....AC...T...AGC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  
                    Query_13673  91   AGTGGGTGGCCAACATAAAGCAAGATGGAAGTGAGAAACACTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACCCCA  180
V  90.8% (226/249)  IGHV3-7*01   137  ......................................T......T........................................G...  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  T  S  L  Y  L  Q  M  N  F  L  R  G  D  D  S  A  V  Y  Y  C  A  T  G  A  G  S  G  S  T  
                    Query_13673  181  AGACTTCACTATATCTGCAAATGAATTTCCTGAGAGGTGACGACTCGGCTGTGTACTACTGTGCGACAGGAGCAGGCAGTGGCTCAACCT  270
V  90.8% (226/249)  IGHV3-7*01   227  ...AC.....G..............CAG........CC..G...A..........T..........G..---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-19*01  8    ---------------------------------------------------------------------------.........------  16
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  A  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13673  271  TTGCCTACTGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  312
J  95.5% (42/44)    IGHJ4*02     7    ...A..................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_290008

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13674  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_13674  91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_13674  181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13674  271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_323771

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         338     5e-95
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	N/A	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	N/A	N/A	TTCGCCACACTTCT	TACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGTTCGCCACACTTCTTACTCCTTCTACGCTTTGGACGTC	ARVRHTSYSFYALDV	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  H  P  P  G  K  G 
                    Query_13675    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGAGTTGGATCCGCCATCCCCCCGGGAAGGGC  90
V  93.2% (233/250)  IGHV4-30-4*01  49   ..................A..............................A........................G.....A.........  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  Y  I  G  Y  V  Y  Y  S  G  T  T  Y  *  N  K  S  L  K  S  R  V  S  I  L  V  D  T  S 
                    Query_13675    91   CTGGAGTACATTGGGTACGTCTATTACAGTGGGACTACCTACTAAAATAAGTCTCTCAAGAGTCGAGTTAGCATATTAGTAGACACGTCC  180
V  93.2% (233/250)  IGHV4-30-4*01  139  .......GG.........A...............GC........C..CCC...C................C.....C.............  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  H  T  S  Y  S 
                    Query_13675    181  AAGAACCAGTTCTCCCTGAAGCTGAGATCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAGTTCGCCACACTTCTTACTCC  270
V  93.2% (233/250)  IGHV4-30-4*01  229  ..........................C...........................................--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  89.5% (51/57)    IGHJ6*02       6    ------------------------------------------------------------------------------------....A.  11

                                        ----------------->                                 
                                         F  Y  A  L  D  V  W  G  Q  G  S  T  V  I  V  S  S 
                    Query_13675    271  TTCTACGCTTTGGACGTCTGGGGCCAAGGGTCCACGGTCATCGTCTCCTCA  321
J  89.5% (51/57)    IGHJ6*02       12   .A.....G.A....................A.........C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_290004

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	235	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  T  L  E  K  G  L  E 
                    Query_13676  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGACCCTAGAGAAGGGACTGGAG  90
V  96.7% (235/243)  IGHV4-59*01  49   .....................................................................C...C..G.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13676  91   TGGATTGGGTATATCTATTACAGTGGGAATACCAACTATAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  96.7% (235/243)  IGHV4-59*01  139  ............................GC........C...................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  L  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_13676  181  CAGCTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTAC  270
V  96.7% (235/243)  IGHV4-59*01  229  ...T.......................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD5-18*01  1    ----------------------------------------------------------------....................------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13676  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_290006

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         363     1e-102
IGHD3-16*02                                                                                           25.7    0.003 
IGHJ4*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-16*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGCAGCC	TGGGGGAATTATCGTT	C	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGCAGCCTGGGGGAATTATCGTTCCTTTGACTAC	ARAAWGNYRSFDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	112	2	0	98.2
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	240	8	0	96.8


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  T  V  S  D  G  S  I  S  G  G  G  F  Y  W  S  W  L  R  Q  P  P  G  K  G 
                    Query_13677    1    ACCCTGTCCCTCACCTGCACTGTCTCTGATGGCTCCATCAGCGGTGGTGGTTTCTACTGGAGTTGGCTCCGCCAGCCCCCAGGAAAGGGC  90
V  96.8% (240/248)  IGHV4-30-4*01  49   ............................G.............A......A..A.............A................G......  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13677    91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  96.8% (240/248)  IGHV4-30-4*01  139  ..........................................................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  A  A  W  G  N  Y  R 
                    Query_13677    181  AAGAACCACTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTTCTGTGCCAGGGCAGCCTGGGGGAATTATCGT  270
V  96.8% (240/248)  IGHV4-30-4*01  229  ........G.................................................A.........----------------------  296
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  93.8% (15/16)    IGHD3-16*02    17   ---------------------------------------------------------------------------.......G.......  31

                                        ----------->                                  
                                         S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13677    271  TCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
D  93.8% (15/16)    IGHD3-16*02    32   .---------------------------------------------  32
J  100.0% (44/44)   IGHJ4*02       5    --............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_290007

Length=328
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           347     7e-98
IGHD5-12*01                                                                                           10.3    115  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGCA	GGCTA	GCCCTCGAG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGCAGGCTAGCCCTCGAGTAC	ARDGRLALEY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	236	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  T  F  S  S  Y  T  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13678  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCACCTTCAGCAGTTATACCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (236/250)  IGHV3-21*01  47   .....................C.....................T..C....G......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  I  S  G  S  S  I  H  I  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13678  91   AGTGGGTCGCGGCCATTAGTGGTAGTAGTATTCATATATACTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (236/250)  IGHV3-21*01  137  ........T.AT........A.........G.T.C..................G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  G  R  L  A  L  E  
                    Query_13678  181  AGAACTCAGTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTTTATTACTGTGCGAGAGATGGCAGGCTAGCCCTCGAGT  270
V  94.4% (236/250)  IGHV3-21*01  227  ........C...........................................G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD5-12*01  12   ---------------------------------------------------------------------------.....----------  16
J  100.0% (37/37)   IGHJ4*02     12   -----------------------------------------------------------------------------------------.  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13678  271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (37/37)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31782891


Query= Query_37820

Length=336
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           327     9e-92
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGAGGGCGGGGGTC	TTATAAC	AGCCCTTGGG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGAGGGCGGGGGTCTTATAACAGCCCTTGGGTAC	AREGGGLITALGY	240	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	225	16	0	93.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  F  S  G  Y  S  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_13679  4    CCCTGAGACTCTCCTGTGCTGTCTATGGTGGATCCTTCAGTGGTTACTCCTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAGT  93
V  93.4% (225/241)  IGHV4-34*01  50   .....TCC...A....C..............G................A.........................................  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  D  I  N  H  S  G  N  T  N  Y  H  P  S  L  E  S  R  V  T  I  S  L  H  T  S  K  N  
                    Query_13679  94   GGATTGGCGATATCAATCATAGTGGAAACACCAACTACCACCCGTCCCTCGAGAGTCGAGTCACCATATCATTACACACGTCCAAGAACC  183
V  93.4% (225/241)  IGHV4-34*01  140  .......G..A................G..........A...........A....................G..G...............  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------CDR3-IMGT----------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  G  L  I  T  A  L  
                    Query_13679  184  AATTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTGTACTACTGTGCGAGGGAGGGCGGGGGTCTTATAACAGCCCTTG  273
V  93.4% (225/241)  IGHV4-34*01  230  .G...............................................T...........-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  100.0% (7/7)     IGHD3-10*01  25   ---------------------------------------------------------------------------.......--------  31

                                      ---->                                  
                                      G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13679  274  GGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (37/37)   IGHJ4*02     12   --.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32627619


Query= Query_290002

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.1  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_13680  1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_13680  91   GAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ...................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_13680  181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13680  271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_290003

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            355     3e-100
IGHD5-12*01                                                                                           12.2    31    
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GAGGG	GTGCCTACG	TCCGGGCGTTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGAGGGGTGCCTACGTCCGGGCGTTTTTTGACTAC	ARRGAYVRAFFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  W  M  S  W  V  R  Q  A  P  G  Q  G  L  
                    Query_13681  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTACCTATTGGATGAGCTGGGTCCGCCAGGCTCCAGGGCAGGGACTGG  90
V  96.0% (237/247)  IGHV3-7*01   47   .............................................G..................................A....G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  E  D  G  S  Q  T  Y  S  L  D  S  V  K  G  R  F  T  F  S  R  D  N  A  
                    Query_13681  91   AGTGGGTGGCCAACATAAAGGAAGATGGGAGTCAGACATACTCTCTGGACTCTGTGAAGGGCCGATTCACCTTCTCCAGAGACAACGCCA  180
V  96.0% (237/247)  IGHV3-7*01   137  ....................C.......A...G...A.....A.G..........................A..................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  R  G  A  Y  V  R  A  
                    Query_13681  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGAGGGGTGCCTACGTCCGGGCGT  270
V  96.0% (237/247)  IGHV3-7*01   227  ...................................................................-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  88.9% (8/9)      IGHD5-12*01  10   ------------------------------------------------------------------------...G.....---------  18

                                      ---------->                                  
                                      F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13681  271  TTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (43/43)   IGHJ4*02     6    --...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_168785

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           316     2e-88
IGHD3-22*01                                                                                           19.9    0.16 
IGHJ6*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ACCGTAAAGGG	GGTTATTACT	GTCTACCAGTACTTCGCTTC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAACCGTAAAGGGGGTTATTACTGTCTACCAGTACTTCGCTTCGGACGTC	ARTVKGVITVYQYFASDV	240	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	222	20	0	91.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_13682  4    CCCTGAGACTCTCCTGCGCTGTCTATGGTGGTTCCCTCAGTGGTTACTACTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAGT  93
V  91.7% (222/242)  IGHV4-34*01  50   .....TCC...A...................G...T..................G...........................G.......  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  N  H  S  G  R  T  N  Y  N  P  S  F  Q  S  R  V  S  I  S  L  D  M  S  K  N  
                    Query_13682  94   GGATTGGGGAAATCAATCATAGTGGAAGAACCAACTACAACCCGTCCTTCCAGAGTCGAGTCTCCATTTCATTAGACATGTCCAAGAACC  183
V  91.7% (222/242)  IGHV4-34*01  140  ............................C..................C..A...........A....A...G......C...........  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------------CDR3-IMGT--
                                      Q  F  S  V  K  M  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  T  V  K  G  V  I  T  V  Y  
                    Query_13682  184  AGTTCTCCGTGAAGATGACGTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGAGAACCGTAAAGGGGGTTATTACTGTCTACC  273
V  91.7% (222/242)  IGHV4-34*01  230  ........C.....C...GC..........................G...............----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (10/10)   IGHD3-22*01  20   -------------------------------------------------------------------------..........-------  29

                                      ------------------->                                 
                                      Q  Y  F  A  S  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13682  274  AGTACTTCGCTTCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  100.0% (40/40)   IGHJ6*02     23   -------------........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_168784

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           366     2e-103
IGHD1-26*01                                                                                           16.1    2.5   
IGHJ1*01                                                                                              62.2    7e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGAC	GGGAGCTA	TCCCTGGCAACTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGATCGACGGGAGCTATCCCTGGCAACTTC	SRSTGAIPGNF	290	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	73	2	0	97.3
CDR1-IMGT	77	100	24	21	3	0	87.5
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	18	6	0	75
FR3-IMGT	176	289	114	99	15	0	86.8
CDR3-IMGT (germline)	290	295	6	5	1	0	83.3
Total	N/A	N/A	294	264	30	0	89.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_13683  2    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  91
V  89.8% (264/294)  IGHV1-18*01  1    ...G.T....................................................................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  F  G  V  T  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  R  A  A  Y  N  A  D  T  K  Y 
                    Query_13683  92   GACTTTGGTGTCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGTTGGGATGGAGAGCCGCTTACAATGCTGACACAAAGTAT  181
V  89.8% (264/294)  IGHV1-18*01  91   AG..A....A...G.....................................A.........TCAG...........G.A.......C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       T  P  K  L  Q  G  R  L  T  L  T  T  D  S  S  T  S  A  A  Y  L  D  L  R  S  L  G  S  D  D 
                    Query_13683  182  ACACCGAAACTCCAGGGCAGACTCACCTTGACCACCGACTCATCCACGAGCGCAGCCTACTTGGACTTGAGGAGCCTGGGATCTGACGAC  271
V  89.8% (264/294)  IGHV1-18*01  181  G...A...G............G.....A.......A...A...........A........A....GC...........A...........  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------CDR3-IMGT----------->                                  
                                       T  A  L  Y  Y  C  S  R  S  T  G  A  I  P  G  N  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13683  272  ACGGCCCTTTATTACTGTTCGAGATCGACGGGAGCTATCCCTGGCAACTTCTGGGGCCAGGGCACCCTCGTCACCGTCTCCTCAG  356
V  89.8% (264/294)  IGHV1-18*01  271  ......G.G.........G.....-------------------------------------------------------------  294
                                       T  A  V  Y  Y  C  A  R                                                              
D  100.0% (8/8)     IGHD1-26*01  9    -----------------------------........------------------------------------------------  16
J  97.1% (34/35)    IGHJ1*01     18   --------------------------------------------------..................G................  52


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_168787

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           402     3e-114
IGHD2-2*01                                                                                            21.8    0.046 
IGHJ5*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAGTAGTGAA	TACCAGCTGCT	GTT	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCC	ARSSSEYQLLFWFDP	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	273	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  A  K  K  P  G  E  S  L  T  I  S  C  K  G  S  G  Y  N  F  N  S  N
                    Query_13684  1    GCAGCTGGTGCAGTCTGGAGCAGAGGCGAAAAAGCCGGGGGAGTCTCTGACGATCTCCTGTAAGGGTTCTGGATACAACTTTAACAGTAA  90
V  94.5% (273/289)  IGHV5-51*03  6    ..........................T.......................A..........................G.....C...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_13684  91   CTGGATCGGATGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATATATCCTGGTGACTCTGATGCCAGATATAGTCC  180
V  94.5% (273/289)  IGHV5-51*03  96   .........C...............................................C..................A.......C..C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  K  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  S  S  D  T  A
                    Query_13684  181  GTCCTTCAAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTCAAGTCCTCGGACACCGC  270
V  94.5% (273/289)  IGHV5-51*03  186  .......C.....................C..........................................G...G.............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  S  S  E  Y  Q  L  L  F  W  F  D  P  W  G  Q  G  T  L  V  T  V  T  S
                    Query_13684  271  CATGTATTATTGTGCGAGAAGTAGTAGTGAATACCAGCTGCTGTTCTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCACCTC  360
V  94.5% (273/289)  IGHV5-51*03  276  .........C.........-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (11/11)   IGHD2-2*01   16   -------------------------------...........------------------------------------------------  26
J  97.9% (46/47)    IGHJ5*02     5    ---------------------------------------------........................................T....  49

                                        
                                        
                    Query_13684  361  AG  362
J  97.9% (46/47)    IGHJ5*02     50   ..  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_168786

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            339     2e-95
IGHD3-3*01                                                                                            12.2    32   
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGG	ACGATT	CCCCCACAATTACACC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGGACGATTCCCCCACAATTACACCATGGACGTC	ARVGRFPHNYTMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  Y  F  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13685  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAATAACTATTTCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-7*01   47   ..........................................G..G.....GG....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  Y  D  G  G  S  V  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13685  91   AGTGGGTGGCCAACATATACGATGGTGGAAGTGTAAAATATTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  93.6% (233/249)  IGHV3-7*01   137  .................A.GC.A.A........AG.....C.................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      R  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  V  G  R  F  P  H  N  
                    Query_13685  181  GGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTACTACTGTGCGAGAGTGGGACGATTCCCCCACAATT  270
V  93.6% (233/249)  IGHV3-7*01   227  A...................................................G..T.............---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-3*01   6    -------------------------------------------------------------------------......-----------  11

                                      ------------->                                 
                                      Y  T  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13685  271  ACACCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  100.0% (42/42)   IGHJ6*02     21   -----..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_168781

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           300     9e-84
IGHD3-22*01                                                                                           31.5    6e-05
IGHJ4*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTCCCAGGGTGACCTAC	TACTATGATAATACTGGTTATT	TTTCCCCATACCC	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTCCCAGGGTGACCTACTACTATGATAATACTGGTTATTTTTCCCCATACCCCTTCGACTAC	ARSPRVTYYYDNTGYFSPYPFDY	240	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	245	6	6	0	0	100
Total	N/A	N/A	242	217	25	0	89.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  N  S  Y  Y  W  S  W  V  R  Q  S  P  G  K  G  L  Q  
                    Query_13686  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAATAGTTATTACTGGAGCTGGGTCCGGCAGTCCCCAGGGAAGGGACTGCAGT  93
V  89.7% (217/242)  IGHV4-59*01  50   .....TCC...A...........................G......C............A........C.................G...  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  V  G  Y  V  Y  Y  L  G  T  T  N  Y  N  P  S  L  Q  N  R  V  T  I  S  V  D  T  S  E  N  
                    Query_13686  94   GGGTTGGCTATGTCTATTACCTTGGGACCACCAACTACAACCCCTCCCTACAGAATCGAGTCACCATTTCAGTTGACACGTCCGAGAACC  183
V  89.7% (217/242)  IGHV4-59*01  140  ..A....G...A........AG.....G.....................CA...G............A.....A.........A......  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------------------------CDR3
                                      Q  F  S  L  N  L  A  A  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  R  V  T  Y  Y  Y  D  
                    Query_13686  184  AGTTCTCCCTGAACCTGGCCGCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAAGTCCCAGGGTGACCTACTACTATGATA  273
V  89.7% (217/242)  IGHV4-59*01  230  .............G...AG.T.........................................----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  90.9% (20/22)    IGHD3-22*01  5    --------------------------------------------------------------------------------..........  14

                                      -IMGT----------------------------->                                  
                                      N  T  G  Y  F  S  P  Y  P  F  D  Y  W  G  H  G  I  L  V  T  V  S  S  
                    Query_13686  274  ATACTGGTTATTTTTCCCCATACCCCTTCGACTACTGGGGCCACGGAATCCTGGTCACCGTCTCCTCAG  342
D  90.9% (20/22)    IGHD3-22*01  15   G..G........---------------------------------------------------------  26
J  93.2% (41/44)    IGHJ4*01     5    -------------------------...T..............A....C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_335336

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           318     6e-89
IGHD2-2*01                                                                                            33.4    1e-05
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AGCGGCGGG	TTGTGGTAGTACCGGCTGCTATG	GAAAT	AACCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAGCGGCGGGTTGTGGTAGTACCGGCTGCTATGGAAATAACCGGTTCGACCCC	AREAAGCGSTGCYGNNRFDP	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	99	15	0	86.8
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	224	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  I  N  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13687  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTATAAACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  91.4% (224/245)  IGHV4-59*01  49   ...........................................GTT...................G........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  D  H  N  T  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13687  91   TGGATTGGGTATATCCATTACAGTGGAAGCACCGACCACAACACCTCCCTCAAGAGTCGAGTCACCATTTCAGTTGACACGTCCAAGAAC  180
V  91.4% (224/245)  IGHV4-59*01  139  ...............T..........G......A..T.....C.........................A.....A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  T  S  L  K  V  T  F  V  T  A  A  E  T  A  V  Y  Y  F  A  R  E  A  A  G  C  G  S  T  G 
                    Query_13687  181  CAGACCTCCCTGAAGGTGACCTTTGTGACCGCTGCGGAAACGGCCGTCTATTATTTCGCGAGAGAAGCGGCGGGTTGTGGTAGTACCGGC  270
V  91.4% (224/245)  IGHV4-59*01  229  ...TT..........C...G..C...............C........G.....C.GT........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  91.3% (21/23)    IGHD2-2*01   7    --------------------------------------------------------------------------....A........A..  22

                                      GT------------------------>                                  
                                       C  Y  G  N  N  R  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13687  271  TGCTATGGAAATAACCGGTTCGACCCCTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  331
D  91.3% (21/23)    IGHD2-2*01   23   .......------------------------------------------------------  29
J  95.9% (47/49)    IGHJ5*02     3    ------------...T...............................C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_168782

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           291     6e-81
IGHD3-16*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGAGGGGGGGACAAC	ATTGTGCTTACCTTCGGGGGAG	GTCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGGGACAACATTGTGCTTACCTTCGGGGGAGGTCTCTTTGACAGC	ARGGDNIVLTFGGGLFDS	246	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	245	117	104	10	3	88.9
CDR3-IMGT (germline)	246	248	3	3	0	0	100
Total	N/A	N/A	248	219	26	3	88.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  G  Y  A  M  G  W  V  R  Q  V  P  G  K  G  L  
                    Query_13688  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCCGGATTCACCTTTAGCGGCTATGCCATGGGCTGGGTCCGCCAGGTCCCAGGGAAGGGGCTGG  90
V  88.3% (219/248)  IGHV3-23*01  47   .....................C......T...............A...........A...............CT................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      G  W  V  S  G  I  S  R  N  G  G  R  T  A  N  Y  A  E  S  V  K  G  R  Y  T  I  S  R  D  N  
                    Query_13688  91   GGTGGGTCTCAGGCATTAGTCGTAACGGCGGGAGGACCGCGAACTACGCAGAGTCCGTGAAGGGCCGGTACACCATCTCCAGAGACAATT  180
V  88.3% (219/248)  IGHV3-23*01  137  A...........CT......G...GT..T..T..C..AT---..........C................T....................  223
                                      E  W  V  S  A  I  S  G  S  G  G  S  T     Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  

                                      --FR3-IMGT------------------------------------------------------><----------------------CD
                                      S  K  N  T  V  F  L  Q  R  N  S  L  R  A  E  D  T  G  I  Y  Y  C  A  R  G  G  D  N  I  V  
                    Query_13688  181  CGAAGAACACGGTGTTTCTGCAAAGGAACAGCCTGAGAGCCGAGGACACGGGCATATACTACTGTGCGCGAGGGGGGGACAACATTGTGC  270
V  88.3% (219/248)  IGHV3-23*01  224  .C.........C...A........T..........................C.G....T.........----------------------  291
                                      S  K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                       
D  81.8% (18/22)    IGHD3-16*01  3    -----------------------------------------------------------------------------------...A..A  9

                                      R3-IMGT--------------------->                                  
                                      L  T  F  G  G  G  L  F  D  S  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_13688  271  TTACCTTCGGGGGAGGTCTCTTTGACAGCTGGGGCCAGGGAACCCTAGTCGCCGTCTCCTCAG  333
D  81.8% (18/22)    IGHD3-16*01  10   ....G..T.......------------------------------------------------  24
J  90.9% (40/44)    IGHJ4*02     5    -------------------.......TA..................G...A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_335338

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*08                                                                                           305     3e-85
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGGTGG	AGCAGTGGCTGGT	CGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGGGTGGAGCAGTGGCTGGTCGGTTTGACTTC	AREGGAVAGRFDF	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	103	11	0	90.4
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	223	28	0	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  R  G  P  V  S  S  G  G  Y  H  W  S  W  I  R  Q  T  P  G  R  G 
                    Query_13689  1    ACCCTGTCCCTCACCTGCTCTGTCTCTCGTGGCCCCGTCAGCAGTGGGGGTTATCACTGGTCCTGGATCCGGCAGACCCCAGGCAGGGGA  90
V  88.8% (223/251)  IGHV4-61*08  49   ..................A........G.....T.............T.....CT.....AG.............C.......G.A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  H  F  T  G  T  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  A  D  M  S 
                    Query_13689  91   CTGGAGTGGATTGGCTATATCCACTTCACTGGGACCACCAAGTACAACCCCTCCCTTAAGAGTCGAGTCAGCATATCAGCAGACATGTCC  180
V  88.8% (223/251)  IGHV4-61*08  139  ..............G......T.T.A..G.....G......C..............C.............C........T.....C....  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  G  G  A  V  A  G 
                    Query_13689  181  AAGAACCAATTCTCCCTGAACCTGAGGTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTGCGAGAGAGGGTGGAGCAGTGGCTGGT  270
V  88.8% (223/251)  IGHV4-61*08  229  ........G...........G.....C..........................G..T..C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (13/13)   IGHD6-19*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------->                                  
                                       R  F  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13689  271  CGGTTTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ4*02     6    ---.......A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_335339

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD2-2*01                                                                                            19.9    0.16 
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGACAG	ATTGTCGTAGTCCCCGGTGCTA	C	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGACAGATTGTCGTAGTCCCCGGTGCTACCTACGGTATGGACGTC	ARDRQIVVVPGATYGMDV	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  S  S  S  Y  F  W  T  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_13690  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCAGCAGTAGTTACTTCTGGACTTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  90.6% (222/245)  IGHV4-59*01  49   .....................................T...........A.....GC.................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  D  G  S  G  S  P  R  Y  N  P  S  L  K  S  R  V  T  M  S  L  D  T  S  K  N 
                    Query_13690  91   TGGATTGGCTATGTCGATGGCAGTGGGAGTCCCAGGTACAACCCCTCCCTCAAGAGTCGAGTCACCATGTCGCTAGACACGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-59*01  139  ........G...A..T..TA.........CA...AC................................A..AG.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       R  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  Q  I  V  V  V  P  G 
                    Query_13690  181  CGATTCTCCCTGAGGCTGAATTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCGACAGATTGTCGTAGTCCCCGGT  270
V  90.6% (222/245)  IGHV4-59*01  229  .AG..........A.....GC............................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  81.8% (18/22)    IGHD2-2*01   6    ------------------------------------------------------------------------.....A.....A..A.C.  23

                                      -------------------->                                 
                                       A  T  Y  G  M  D  V  W  G  Q  G  T  S  V  T  V  S  S 
                    Query_13690  271  GCTACCTACGGTATGGACGTCTGGGGCCAAGGGACCTCGGTCACCGTCTCCTCA  324
D  81.8% (18/22)    IGHD2-2*01   24   ....--------------------------------------------------  27
J  98.0% (48/49)    IGHJ6*02     14   -----...............................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_32798

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            374     8e-106
IGHD3-3*01                                                                                            12.2    34    
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ACCCGTGTGATGCC	TACCATCTTTGG	TG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAACCCGTGTGATGCCTACCATCTTTGGTGACTACGGTATGGACGTC	ARTRVMPTIFGDYGMDV	264	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	77	27	24	3	0	88.9
FR2-IMGT	78	128	51	51	0	0	100
CDR2-IMGT	129	149	21	18	3	0	85.7
FR3-IMGT	150	263	114	107	7	0	93.9
CDR3-IMGT (germline)	264	269	6	5	1	0	83.3
Total	N/A	N/A	269	254	15	0	94.4


Alignments

                                      <--------------------FR1-IMGT--------------------><--------CDR1-IMGT--------><------------
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  D  S  I  T  S  S  H  W  W  S  W  V  
                    Query_13691  1    CAGGACTGGTGAAGCCCTCGGGGACCCTGTCCCTCACCTGCGCTGTCTCTGGTGACTCCATCACCAGTAGTCACTGGTGGAGTTGGGTCC  90
V  94.4% (254/269)  IGHV4-4*02   26   ................T.....................................G........G.......A..................  115
                                         G  L  V  K  P  S  G  T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  

                                      --------FR2-IMGT---------------------><-----CDR2-IMGT-----><------------------------------
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  R  T  R  V  
                    Query_13691  91   GCCAGCCCCCAGGGAAGGGGCTGGAGTGGATTGGGGAAATCTATTATAGTGGGACCACGAACTACAATCCGTCCCTCAGGACTCGAGTCA  180
V  94.4% (254/269)  IGHV4-4*02   116  ............................................C.........G...C........C..........A..G........  205
                                      R  Q  P  P  G  K  G  L  E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  

                                      ----------------------FR3-IMGT----------------------------------------------------><------
                                      T  I  S  I  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  
                    Query_13691  181  CCATATCAATAGACAAGTCCAAGAATCAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCCGTCTATTTCTGTGCCAGAA  270
V  94.4% (254/269)  IGHV4-4*02   206  ........G................C...............................................G....A......G...-  294
                                      T  I  S  V  D  K  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  

                                      --------------CDR3-IMGT-------------------->                                 
                                      T  R  V  M  P  T  I  F  G  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13691  271  CCCGTGTGATGCCTACCATCTTTGGTGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  347
D  83.3% (10/12)    IGHD3-3*01   5    -------------...G..T.....----------------------------------------------------  16
J  100.0% (50/50)   IGHJ6*02     13   ---------------------------..................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_168789

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*03                                                                                           325     3e-91
IGHD6-13*01                                                                                           16.1    2.1  
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*03	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ATTGT	ACAGG	AGCATCAGCTG	AGGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACAGGAGCATCAGCTGAGGGGTGGTTCGACCCC	TGASAEGWFDP	243	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
Total	N/A	N/A	242	225	17	0	93


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  T  L  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13692  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGACTCACGTTGAGTAGTTATGGGATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.0% (225/242)  IGHV3-33*03  47   ................................T....C..C.....C.....C.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  I  K  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_13692  91   AATGGGTGGCAGTTATATGGTATGATGGAATTAAAAAATTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACGACTCCA  180
V  93.0% (225/242)  IGHV3-33*03  137  .G............................G...T....A...........................................A......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT-------
                                      K  N  T  L  F  L  Q  M  N  S  L  R  A  D  D  T  A  L  Y  Y  C  T  G  A  S  A  E  G  W  F  
                    Query_13692  181  AGAACACCCTGTTTCTGCAGATGAACAGCCTGAGAGCCGACGACACGGCTCTTTATTATTGTACAGGAGCATCAGCTGAGGGGTGGTTCG  270
V  93.0% (225/242)  IGHV3-33*03  227  .......G....A......A....................G.........G.G.....C...----------------------------  288
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C                             
D  90.9% (10/11)    IGHD6-13*01  7    -------------------------------------------------------------------....G......------------  17
J  100.0% (46/46)   IGHJ5*02     6    -----------------------------------------------------------------------------------.......  12

                                      ---->                                  
                                      D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13692  271  ACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  309
J  100.0% (46/46)   IGHJ5*02     13   .......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_168788

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           360     1e-101
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCACTC	CTATGGTTCGGGGAGTTATTAT	GCTCAAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTCCTATGGTTCGGGGAGTTATTATGCTCAAGAC	ARGHSYGSGSYYAQD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_13693  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  96.0% (240/250)  IGHV4-31*03  49   ..................A...........GG.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_13693  91   CTCGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTGGACACGTCT  180
V  96.0% (240/250)  IGHV4-31*03  139  ..G...............................G...............................G.............A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  G  H  S  Y  G  S  G 
                    Query_13693  181  AAGAACCAGTTCTCCCTGAAGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGAGGCCACTCCTATGGTTCGGGG  270
V  96.0% (240/250)  IGHV4-31*03  229  .........................G................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01  7    -----------------------------------------------------------------------------.............  19

                                      ----------------->                                  
                                       S  Y  Y  A  Q  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13693  271  AGTTATTATGCTCAAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (22/22)   IGHD3-10*01  20   .........-------------------------------------------  28
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_37824

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           371     7e-105
IGHD3-9*01                                                                                            14.1    8.5   
IGHJ3*02                                                                                              85.3    7e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-9*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCTACG	TTTTGGCTGG	GAGAA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATCTACGTTTTGGCTGGGAGAATGATGCACTTGATATC	ARHLRFGWENDALDI	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_13694  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  97.2% (244/251)  IGHV4-39*01  49   .........................................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  D  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13694  91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAGCACCTACGACAACCCGTCCCTCAAGAGTCGAGTCACCATCTCCGTTGACACGTCC  180
V  97.2% (244/251)  IGHV4-39*01  139  ..........................................T...............................A.....A.........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  L  R  F  G  W  E 
                    Query_13694  181  AAGAATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTGCGAGACATCTACGTTTTGGCTGGGAG  270
V  97.2% (244/251)  IGHV4-39*01  229  .....C.............A.......................................C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.0% (9/10)     IGHD3-9*01   12   -----------------------------------------------------------------------------.....A....---  21

                                      ----------------->                                  
                                       N  D  A  L  D  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13694  271  AATGATGCACTTGATATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  322
J  96.0% (48/50)    IGHJ3*02     1    --......TT..........................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_37825

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD5-12*01                                                                                           10.3    118  
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACAC	GTGGC	ACTCTGGGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCTGGGTTTTGATTCC	AGHLATRGTLGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_13695  1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  87.0% (214/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_13695  91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCACCATCTCAGTAGACAAGTCCAAG  180
V  87.0% (214/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A................A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  L 
                    Query_13695  181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCTG  270
V  87.0% (214/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (5/5)     IGHD5-12*01  10   -------------------------------------------------------------------------------.....------  14

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_13695  271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_211085

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     1e-95
IGHD3-16*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TGATGACGTTTCGGGGA	TTCCGGGAC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGATGACGTTTCGGGGATTCCGGGACAC	REMMTFRGFRDT	237	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	26	27	26	0	1	96.3
CDR1-IMGT	27	50	24	22	2	0	91.7
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	122	21	19	2	0	90.5
FR3-IMGT	123	236	114	110	4	0	96.5
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	245	233	11	1	95.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L   P  S  P  A  L  S  L  V  T  P  S  I  V  T  T  G  A  G  S  G  S  P  Q  E  R  D  W  S
                    Query_13696  1    ACCCTG-CCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGAAAGGGACTGGAG  89
V  95.1% (233/245)  IGHV4-59*01  49   ......T........................G........G....................................G............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                        G  L  V  I  S  I  T  V  A  A  P  T  T  T  P  P  S  R  V  E  S  P  Y  Q  *  T  R  P  R  T
                    Query_13696  90   TGGATTGGTCATATCTATCACAGTGGCAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  179
V  95.1% (233/245)  IGHV4-59*01  139  ........GT........T.......G...............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                        S  S  P  *  G  *  P  L  *  P  L  R  T  Q  A  C  I  T  V  R  E  M  M  T  F  R  G  F  R  D
                    Query_13696  180  CAGTTCTCCCTGAGGCTGACCTCTGTGACCGCTGCGGACACAGGCGTGTATTACTGTGCGAGAGATGATGACGTTTCGGGGATTCCGGGA  269
V  95.1% (233/245)  IGHV4-59*01  229  .............A.....G.....................G.C.....................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.2% (15/17)    IGHD3-16*01  7    -----------------------------------------------------------------....T......G.....--------  23

                                      -->                                  
                                        T  G  A  R  E  R  W  S  P  S  P  Q 
                    Query_13696  270  CACTGGGGCCAGGGAACGCTGGTCTCCGTCTCCTCAG  306
J  94.4% (34/36)    IGHJ4*02     13   -................C......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_211084

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           378     3e-107
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTTGTCGTATTCTTT	TGATAGTAGTGGT	CAGAGTCCCGCG	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTTGTCGTATTCTTTTGATAGTAGTGGTCAGAGTCCCGCGTACTTTGACTAC	ARDLSYSFDSSGQSPAYFDY	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13697  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.4% (246/250)  IGHV3-21*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  C  I  S  G  G  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13697  91   AGTGGGTCTCATGCATCAGTGGTGGTAGTAGTTACATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  98.4% (246/250)  IGHV3-21*01  137  ............C...T...A..A..................................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  S  Y  S  F  D  
                    Query_13697  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGATTTGTCGTATTCTTTTGATA  270
V  98.4% (246/250)  IGHV3-21*01  227  ......................................................................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD3-22*01  10   -------------------------------------------------------------------------------------.....  14

                                      R3-IMGT------------------------>                                  
                                      S  S  G  Q  S  P  A  Y  F  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_13697  271  GTAGTGGTCAGAGTCCCGCGTACTTTGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  336
D  100.0% (13/13)   IGHD3-22*01  15   ........----------------------------------------------------------  22
J  97.8% (45/46)    IGHJ4*02     3    --------------------........................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_315009

Length=395
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           349     3e-98
IGHD2-21*02                                                                                           33.4    2e-05
IGHJ3*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-21*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	C	TGTGGTGGTGACTGTTATTC	TTCCGACGTA	GATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCAGAGACTGTGGTGGTGACTGTTATTCTTCCGACGTAGATGGTTTTGATATC	SRDCGGDCYSSDVDGFDI	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	291	8	6	2	0	75
Total	N/A	N/A	291	257	34	0	88.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  A  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  S  F  T  S  N
                    Query_13698  1    GCAGCTGGTGCAGTCTGGGGCTGCGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCCTCTGGAGACTCCTTCACCAGTAA  90
V  88.3% (257/291)  IGHV1-69*01  6    .......................A..........................................T.......G.A......G...CT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  V  I  P  A  F  G  S  A  N  Y  A  Q
                    Query_13698  91   TGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGAGTCATCCCTGCTTTTGGCTCTGCAAACTACGCCCA  180
V  88.3% (257/291)  IGHV1-69*01  96   ........G...........................................G.GA........ATC.....TA.A...........A..  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  I  T  I  T  A  G  E  S  T  N  T  A  Y  L  E  L  S  S  L  R  P  E  D  T  A
                    Query_13698  181  GAAGTTCCAGGGGAGAATTACAATTACCGCGGGCGAGTCCACGAACACAGCCTACTTGGAACTGAGCAGCCTGAGACCTGAGGACACGGC  270
V  88.3% (257/291)  IGHV1-69*01  186  ............C...G.C..G..........A...A.......G..........A....G...............T.............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        L  Y  Y  C  S  R  D  C  G  G  D  C  Y  S  S  D  V  D  G  F  D  I  W  G  Q  G  T  M  V  I
                    Query_13698  271  CCTCTACTACTGCTCCAGAGACTGTGGTGGTGACTGTTATTCTTCCGACGTAGATGGTTTTGATATCTGGGGCCAGGGGACAATGGTCAT  360
V  88.3% (257/291)  IGHV1-69*01  276  .G.G..T.....TG.G.....---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  95.0% (19/20)    IGHD2-21*02  8    ----------------------..............C.....------------------------------------------------  27
J  93.9% (46/49)    IGHJ3*02     2    ----------------------------------------------------....C..................A.............C  39

                                                 
                                        V  S  S  
                    Query_13698  361  CGTCTCTTCAG  371
J  93.9% (46/49)    IGHJ3*02     40   ...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38857488


Query= Query_211081

Length=320
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           310     1e-86
IGHD5-12*01                                                                                           12.2    30   
IGHJ4*02                                                                                              56.4    3e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCC	GTGGAT	TAAGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCGTGGATTAAGCTTC	ATRGLSF	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	18	6	0	75
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	4	0	0	100
Total	N/A	N/A	246	222	24	0	90.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  F  S  N  Y  D  M  N  W  L  R  Q  A  P  G  K  G  P  
                    Query_13699  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACTTTCAGTAATTACGACATGAACTGGCTCCGCCAGGCTCCTGGGAAGGGGCCGG  90
V  90.2% (222/246)  IGHV3-48*03  47   .....................C...............C.......G...T..A.........G.............A..........T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  R  G  D  I  T  Y  Y  A  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_13699  91   AGTGGGTCTCATCCATTAGTAGTCGTGGAGATATCACATACTACGCGGACTCAGTGGAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.2% (222/246)  IGHV3-48*03  137  .......T....A..........A....TAG..C..T.........A.....T...A.................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  S  L  Q  M  N  S  L  R  V  E  D  T  A  L  Y  Y  C  A  T  R  G  L  S  F  W  G  
                    Query_13699  181  AGAACTCACTGTCCCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTCTTTATTACTGTGCGACCCGTGGATTAAGCTTCTGGGGCC  270
V  90.2% (222/246)  IGHV3-48*03  227  ............AT......................C...G.........G...............------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (6/6)     IGHD5-12*01  1    ---------------------------------------------------------------------......---------------  6
J  94.3% (33/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  A  Q  V  T  V  S  S  
                    Query_13699  271  AGGGAGCCCAGGTCACCGTCTCCTCAG  297
J  94.3% (33/35)    IGHJ4*02     22   .....A...T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30938163


Query= Query_315005

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           405     4e-115
IGHD2-21*01                                                                                           14.1    9.7   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGG	ATTTTGGTGG	ATAGAGATAGAGTTCC	GTATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTC	ARGGFWWIEIEFRMDV	291	338	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	106	8	0	93
CDR3-IMGT (germline)	291	297	7	7	0	0	100
Total	N/A	N/A	295	277	18	0	93.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_13700  3    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACTTTTACC  92
V  93.9% (277/295)  IGHV1-18*01  1    .....T.....G.......................................................................C......  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       D  Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  V  G  W  I  S  A  Y  T  G  S  T  K  N 
                    Query_13700  93   GACTATGGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGGTGGGATGGATCAGCGCTTACACTGGTAGTACAAAAAAT  182
V  93.9% (277/295)  IGHV1-18*01  91   AG...........G.....................................A.....................A.....AC.....CT..  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  V  Q  G  R  V  T  M  T  T  D  T  S  T  R  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_13700  183  GCACAAAAAGTCCAGGGCAGAGTGACCATGACCACAGACACATCCACGAGAACAGCCTACATGGAGTTGAGGAGCCTGAGATCTGACGAC  272
V  93.9% (277/295)  IGHV1-18*01  181  .....G..GC.............C..........................C...............C.......................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-------------------CDR3-IMGT------------------>                        
                                       T  A  V  Y  Y  C  A  R  G  G  F  W  W  I  E  I  E  F  R  M  D  V  W  G  Q  G  T  T  V  T 
                    Query_13700  273  ACGGCCGTGTATTACTGTGCGAGAGGGGGATTTTGGTGGATAGAGATAGAGTTCCGTATGGACGTCTGGGGCCAAGGGACCACGGTCACC  362
V  93.9% (277/295)  IGHV1-18*01  271  .........................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  90.0% (9/10)     IGHD2-21*01  6    -----------------------------...G......---------------------------------------------------  15
J  100.0% (44/44)   IGHJ6*02     19   -------------------------------------------------------...................................  53

                                               
                                       V  S  S 
                    Query_13700  363  GTCTCCTCA  371
J  100.0% (44/44)   IGHJ6*02     54   .........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_315006

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           294     6e-82
IGHD4-17*01                                                                                           12.2    32   
IGHJ2*01                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-17*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAACAGTTTTTCTCCGCCGTCG	GACTAC	TT	CTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATAACAGTTTTTCTCCGCCGTCGGACTACTTCTTCGATCTC	VRDNSFSPPSDYFFDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	219	31	0	87.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  K  N  Y  N  M  N  W  V  R  Q  A  P  G  K  R  L  
                    Query_13701  1    GGTCCCTGAGACTCTCCTGTACAGCCTCTGGATTCACCTTCAAGAACTACAACATGAACTGGGTCCGCCAGGCTCCAGGGAAGCGGCTGG  90
V  87.6% (219/250)  IGHV3-21*01  47   ....................G.....................GT.G...T.G...............................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  R  G  R  N  N  D  I  H  Y  A  D  S  M  K  G  R  I  T  I  S  R  D  N  A  
                    Query_13701  91   AGTGGGTCTCATCGATTAGAGGTAGAAACAATGACATCCACTACGCAGACTCAATGAAGGGCCGAATCACCATCTCCAGAGACAACGCCA  180
V  87.6% (219/250)  IGHV3-21*01  137  .............C.....TA....T.GT.G.T....AT..............G...........T........................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      N  N  S  L  Y  L  H  M  H  S  L  G  A  E  D  T  A  I  Y  F  C  V  R  D  N  S  F  S  P  P  
                    Query_13701  181  ACAACTCACTCTATCTCCACATGCACAGCCTGGGAGCCGAGGACACGGCTATCTATTTCTGCGTCAGAGATAACAGTTTTTCTCCGCCGT  270
V  87.6% (219/250)  IGHV3-21*01  227  .G........G.....G..A...A........A.................G.G....A...T.CG.....--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      T------------------>                                  
                                      S  D  Y  F  F  D  L  W  G  R  G  T  P  V  S  V  S  S  
                    Query_13701  271  CGGACTACTTCTTCGATCTCTGGGGCCGTGGCACCCCAGTCTCTGTCTCCTCAG  324
D  100.0% (6/6)     IGHD4-17*01  2    --......----------------------------------------------  7
J  93.2% (41/44)    IGHJ2*01     10   ----------..........................TG...A............  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_323778

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           413     2e-117
IGHD3-10*01                                                                                           12.2    37    
IGHJ2*01                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-10*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGACCGCAGAGATGGCAAAA	TTCGGG	TG	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGACCGCAGAGATGGCAAAATTCGGGTGTACTGGTACTTCGGTCTC	ARGDRRDGKIRVYWYFGL	284	337	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y
                    Query_13702  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCAGGAGGCACCTTCAGCAGCTA  90
V  95.5% (277/290)  IGHV1-69*06  6    .....................................................................T....................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        V  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  V  P  V  L  R  T  A  N  Y  A  Q
                    Query_13702  91   TGTTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGGGGGATCGTCCCTGTCCTTCGTACAGCGAACTACGCACA  180
V  95.5% (277/290)  IGHV1-69*06  96   ..C.....G..........................................A......A.....A..T..G.......A...........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  D  R  V  T  I  T  A  D  K  S  R  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A
                    Query_13702  181  GAAGTTCCAGGACAGAGTCACGATTACCGCGGACAAATCCAGGAGTACAGTCTACATGGAGCTGAGCAGCCTGAGATCTGAGGACACGGC  270
V  95.5% (277/290)  IGHV1-69*06  186  ...........G.............................C...C....C.......................................  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------CDR3-IMGT--------------------->                       
                                        V  Y  Y  C  A  R  G  D  R  R  D  G  K  I  R  V  Y  W  Y  F  G  L  W  G  R  G  T  L  V  T
                    Query_13702  271  CGTGTATTACTGTGCGAGAGGAGACCGCAGAGATGGCAAAATTCGGGTGTACTGGTACTTCGGTCTCTGGGGCCGTGGCACCCTGGTCAC  360
V  95.5% (277/290)  IGHV1-69*06  276  ....................----------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD3-10*01  13   -----------------------------------------......-------------------------------------------  18
J  96.2% (50/52)    IGHJ2*01     2    -------------------------------------------------.............A...........................  42

                                                 
                                        V  S  S  
                    Query_13702  361  CGTCTCCTCAG  371
J  96.2% (50/52)    IGHJ2*01     43   T..........  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_315000

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           302     3e-84
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAACA	TATGACT	TATAGCAGT	AGTCCATTA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACATATGACTTATAGCAGTAGTCCATTAGACTAC	AKHMTYSSSPLDY	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	13	8	0	61.9
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	222	29	0	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  S  G  A  S  V  S  S  G  D  Y  Y  W  G  W  I  R  Q  P  P  G  R  G 
                    Query_13703  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCGTCAGTAGTGGTGACTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAGGGGG  90
V  88.4% (222/251)  IGHV4-39*01  49   ..................A............G....A....C...A..AGT..................................A....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  I  Y  N  T  R  Y  P  Y  Y  S  L  S  L  K  S  R  V  T  I  S  V  D  S  S 
                    Query_13703  91   CTGGAGTGGCTTGGGAGTATCTATAATACTAGATATCCCTACTATAGTTTGTCCCTCAAGAGTCGAGTCACCATATCCGTAGACTCGTCC  180
V  88.4% (222/251)  IGHV4-39*01  139  .........A..............T...G.G.GAGCA.......C.ACCC..................................A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  E  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  K  H  M  T  Y  S  S  S 
                    Query_13703  181  AAGAACGAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTTTATTTCTGTGCGAAACATATGACTTATAGCAGTAGT  270
V  88.4% (222/251)  IGHV4-39*01  229  ......C............A.................................G....A........G...-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD6-19*01  4    ------------------------------------------------------------------------------.........---  12

                                      ----------->                                  
                                       P  L  D  Y  W  G  P  G  T  L  V  T  V  S  S  
                    Query_13703  271  CCATTAGACTACTGGGGCCCGGGAACCCTGGTCACCGTCTCTTCAG  316
J  95.0% (38/40)    IGHJ4*02     9    ------.............A.....................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_315001

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           344     6e-97
IGHD3-10*01                                                                                           23.8    0.010
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	231	11	0	95.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13704  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGCAGCCCCCCGGGAAGGGACTGGAG  90
V  95.5% (231/242)  IGHV4-59*01  49   ..........................................AG..............................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13704  91   TGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.5% (231/242)  IGHV4-59*01  139  ................AT........G.G.............................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  G  S  G  N  Y  E  G  W 
                    Query_13704  181  CAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAGGTTCGGGGAATTATGAGGGCTGG  270
V  95.5% (231/242)  IGHV4-59*01  229  .............A......C.........G................G..............----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-10*01  11   ------------------------------------------------------------------..........G....---------  25
J  97.9% (46/47)    IGHJ5*02     5    --------------------------------------------------------------------------------------....  8

                                      -------->                                  
                                       L  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13704  271  CTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  97.9% (46/47)    IGHJ5*02     9    T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_211089

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     3e-90
IGHD6-19*01                                                                                           18.0    0.65 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	267	326	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	45	5	0	90
CDR1-IMGT	51	80	30	23	1	6	76.7
FR2-IMGT	81	131	51	45	6	0	88.2
CDR2-IMGT	132	152	21	15	6	0	71.4
FR3-IMGT	153	266	114	106	8	0	93
CDR3-IMGT (germline)	267	274	8	8	0	0	100
Total	N/A	N/A	274	242	26	6	88.3


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  T  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  
                    Query_13705  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGACCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGT  90
V  88.3% (242/274)  IGHV4-34*01  26   ........T.......T............T................C..T............------........C.......G....A  109
                                         G  L  L  K  P  S  E  T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      C  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  
                    Query_13705  91   GCCGCCAGCCACCAGGGAAGGGCCTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAG  180
V  88.3% (242/274)  IGHV4-34*01  110  T.........C...........G.....G................A..A.AG.....G..C.........C.C.......A.........  199
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  
                    Query_13705  181  TCACCATCTCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGA  270
V  88.3% (242/274)  IGHV4-34*01  200  .......A...................................GC............C........................C.......  289
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------------CDR3-IMGT------------------------>                                 
                                      R  G  H  R  V  S  N  G  W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_13705  271  GAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  359
V  88.3% (242/274)  IGHV4-34*01  290  ....-------------------------------------------------------------------------------------  293
                                      R  G                                                                                     
D  91.7% (11/12)    IGHD6-19*01  7    --------------....G.......---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------------------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_211088

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           224     9e-61
IGHD3-22*01                                                                                           21.8    0.044
IGHJ3*01                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GCATCACACCCCGA	TATTTCTATGACAATAGTGG	ATTCTATAATGAGGGTGGC	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGCATCACACCCCGATATTTCTATGACAATAGTGGATTCTATAATGAGGGTGGCTTTGATTTC	AKGITPRYFYDNSGFYNEGGFDF	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	25	4	0	86.2
CDR1-IMGT	30	53	24	15	9	0	62.5
FR2-IMGT	54	104	51	43	8	0	84.3
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	93	21	0	81.6
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	196	53	0	78.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  T  S  G  F  T  F  S  E  Y  S  M  T  W  V  R  Q  A  P  G  K  P  L  
                    Query_13706  1    GGTCCCTGAGACTCTCCTGTGAGACCTCGGGATTCACATTCAGTGAATACTCTATGACGTGGGTCCGCCAGGCCCCTGGGAAGCCTCTGG  90
V  78.7% (196/249)  IGHV3-23*01  47   .....................CAG....T........C..T..CAGC..TG.C....GC..............T..A......GGG....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  T  V  S  G  S  A  N  S  R  F  Y  T  D  S  V  R  G  R  F  S  I  S  R  D  N  S  
                    Query_13706  91   AGTGGGTCTCAACTGTCAGTGGAAGTGCAAATAGTCGCTTCTACACAGACTCCGTGAGGGGCCGATTTTCCATCTCCAGAGACAATTCCA  180
V  78.7% (196/249)  IGHV3-23*01  137  ...........G..A.T.....T....GTGG...CACA.A....G............A......G..CA.....................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      R  D  T  V  F  L  Q  M  G  R  L  R  P  E  D  T  A  M  Y  Y  C  A  K  G  I  T  P  R  Y  F  
                    Query_13706  181  GGGACACGGTGTTTCTCCAGATGGGCAGACTGAGGCCCGAAGACACGGCCATGTATTATTGTGCGAAAGGCATCACACCCCGATATTTCT  270
V  78.7% (196/249)  IGHV3-23*01  227  A.A.....C...A...G..A...AA...C.....AG....G.........G.A.....C..........---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  85.0% (17/20)    IGHD3-22*01  2    -----------------------------------------------------------------------------------....A..  8

                                      --CDR3-IMGT----------------------------->                                  
                                      Y  D  N  S  G  F  Y  N  E  G  G  F  D  F  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13706  271  ATGACAATAGTGGATTCTATAATGAGGGTGGCTTTGATTTCTGGGGCCAAGGGACAATGGTCACTGTCTCTTCAG  345
D  85.0% (17/20)    IGHD3-22*01  9    ....T.G......--------------------------------------------------------------  21
J  95.3% (41/43)    IGHJ3*01     8    --------------------------------......G.........................C..........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_351039

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD3-22*01                                                                                           37.2    9e-07
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTGTG	TGGTCTT	CTATGATAGCAGTGGTTATTAC	C	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGTCTTCTATGATAGCAGTGGTTATTACCACTTTGACTAT	VVFYDSSGYYHFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	238	1	1	0	0	100
Total	N/A	N/A	238	226	12	0	95


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  A  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13707  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGCCGCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.0% (226/238)  IGHV4-59*01  49   .......................C.......G.T........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  H  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13707  91   TGGATTGGTTATATCTATCACAGTGGGACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  95.0% (226/238)  IGHV4-59*01  139  ........G.........T.........G...............C.............................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  V  V  F  Y  D  S  S  G  Y  Y  H 
                    Query_13707  181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTATACTACTGTGTGGTCTTCTATGATAGCAGTGGTTATTACCAC  270
V  95.0% (226/238)  IGHV4-59*01  229  ...................GC..........................G..T.......--------------------------------  286
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C                                  
D  95.5% (21/22)    IGHD3-22*01  7    -----------------------------------------------------------------.........T............---  28
J  95.6% (43/45)    IGHJ4*02     4    ----------------------------------------------------------------------------------------..  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  S  V  S  S  
                    Query_13707  271  TTTGACTATTGGGGCCAGGGAACCCTGGTCTCCGTCTCCTCAG  313
J  95.6% (43/45)    IGHJ4*02     6    ........C.....................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_351038

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         405     4e-115
IGHD1-26*01                                                                                           10.3    138   
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CATGCCTCCACCCGTAC	GTGGG	GTTTTC	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGCCTCCACCCGTACGTGGGGTTTTCACAACTGGTTCGACCCC	ARHASTRTWGFHNWFDP	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	274	15	0	94.8


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  N  T  F  T  S  Y
                    Query_13708    1    GCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGAAACACCTTTACCAGCTA  90
V  94.8% (274/289)  IGHV5-10-1*01  6    ........................G................................................T...G............  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  T  D  S  Y  T  E  Y  S  P
                    Query_13708    91   CTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAGGATTGATCCTACTGACTCTTATACCGAGTACAGTCC  180
V  94.8% (274/289)  IGHV5-10-1*01  96   .................................................................G.............A.C.....C..  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  P  I  S  S  D  K  S  I  S  P  A  S  L  Q  W  S  S  L  K  A  P  D  P  A
                    Query_13708    181  GTCCTTCCAAGGCCACGTCCCCATCTCCTCTGACAAGTCCATCAGCCCTGCCTCCCTGCAGTGGAGCAGCCTGAAGGCCCCGGACCCCGC  270
V  94.8% (274/289)  IGHV5-10-1*01  186  ...................A.......AG.................A......A.........................T.....A....  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><--------------------CDR3-IMGT-------------------->                          
                                          I  Y  Y  C  A  R  H  A  S  T  R  T  W  G  F  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V
                    Query_13708    271  CATATATTACTGTGCGAGACATGCCTCCACCCGTACGTGGGGTTTTCACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGT  360
V  94.8% (274/289)  IGHV5-10-1*01  276  ...G...............-----------------------------------------------------------------------  294
                                          M  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD1-26*01    7    ------------------------------------.....-------------------------------------------------  11
J  100.0% (51/51)   IGHJ5*02       1    -----------------------------------------------...........................................  43

                                                
                                          S  S  
                    Query_13708    361  CTCCTCAG  368
J  100.0% (51/51)   IGHJ5*02       44   ........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_351035

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           282     4e-78
IGHD3-16*01                                                                                           18.0    0.61 
IGHJ3*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-16*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GACAACG	TATGCTTAT	GTCAGTGCTTGGGGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGACAACGTATGCTTATGTCAGTGCTTGGGGATGATGCTTTTGATGTC	ARRQRMLMSVLGDDAFDV	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	215	35	0	86


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  A  S  V  T  T  T  R  Y  S  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_13709  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCGTCACCACTACTAGATACTCCTGGGGTTGGATCCGCCAGCCCCCAGGGAAGGGA  90
V  86.0% (215/250)  IGHV4-39*01  49   ...............................G....A...G..G..G...T....A......C..........................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Q  M  F  Y  G  G  S  T  Y  Q  N  P  S  L  N  S  R  V  T  V  S  V  D  P  S 
                    Query_13709  91   CTGGAATGGATTGGGCAGATGTTCTATGGTGGGAGCACGTACCAGAACCCGTCGCTGAATAGTCGAGTCACCGTGTCCGTTGACCCGTCC  180
V  86.0% (215/250)  IGHV4-39*01  139  .....G.........AGT..C.AT...A..........C...T.C........C..C..G............A.A.....A...A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  S  Q  F  F  L  N  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  R  Q  R  M  L  M  S 
                    Query_13709  181  AAGAGTCAGTTCTTCCTGAACCTGACCTCTGTGACCGCCGCAGACTCGGCTGTATATTATTGTGCGAGACGACAACGTATGCTTATGTCA  270
V  86.0% (215/250)  IGHV4-39*01  229  ....AC.......C......G....G...................A.......G.....C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (9/9)     IGHD3-16*01  26   -----------------------------------------------------------------------------.........----  34

                                      -IMGT--------------------->                                  
                                       V  L  G  D  D  A  F  D  V  W  G  Q  G  T  G  V  T  V  S  S  
                    Query_13709  271  GTGCTTGGGGATGATGCTTTTGATGTCTGGGGCCAAGGGACAGGGGTCACCGTCTCTTCAG  331
J  96.0% (48/50)    IGHJ3*01     1    -----------...............................AT.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_351034

Length=304
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHJ4*02                                                                                              75.7    5e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCTAT	N/A	N/A	N/A	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTCC	TP	243	247	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	236	108	102	6	0	94.4
Total	N/A	N/A	236	223	13	0	94.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  R  F  R  S  Y  T  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13710  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCCGTTTCAGAAGCTATACCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.5% (223/236)  IGHV3-21*01  47   ...................................ACC.....T.......G.....A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  M  K  G  R  F  S  I  T  R  D  N  A  
                    Query_13710  91   AGTGGGTCTCATCCATTAGTAGTAGCAGTAGTTACATATACTACGCAGACTCAATGAAGGGCCGATTCTCCATCACCAGAGACAACGCCA  180
V  94.5% (223/236)  IGHV3-21*01  137  .........................T...........................G..............A.....T...............  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><CDR>                       
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  T  L  T  P  G  A  R  E  P  W  S  
                    Query_13710  181  AGAACTCACTCTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATACTTTGACTCCTGGGGCCAGGGAACCCTGGTCGC  270
V  94.5% (223/236)  IGHV3-21*01  227  ..........G.............................G...........G...----------------------------------  282
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y                                   
J  95.6% (43/45)    IGHJ4*02     4    --------------------------------------------------------.........A......................A.  37

                                                 
                                      P  S  P  Q 
                    Query_13710  271  CGTCTCCTCAG  281
J  95.6% (43/45)    IGHJ4*02     38   ...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 29248707


Query= Query_351037

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           366     2e-103
IGHD3-16*01                                                                                           14.1    7.9   
IGHJ4*02                                                                                              60.3    2e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	CGAGG	GTTTGGG	CTTT	GGCCA	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	29	1	0	96.7
FR3-IMGT	135	248	114	108	6	0	94.7
CDR3-IMGT (germline)	249	256	8	8	0	0	100
Total	N/A	N/A	256	245	11	0	95.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  V  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13711  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTTACGTCTGGATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.7% (245/256)  IGHV3-15*01  47   .......T.............................T......A...C.........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  S  K  S  D  G  G  T  T  D  Y  T  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_13711  91   AGTGGGTTGGCCGTATTAAAAGCAAAAGTGATGGTGGGACAACAGACTACACTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  95.7% (245/256)  IGHV3-15*01  137  ...........................C......................G.......................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT---------------------------------------------------->                      
                                      D  S  N  S  T  L  F  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T  D  E  G  L  G  
                    Query_13711  181  ATTCAAACAGCACGCTGTTTCTGCAAATGAACAGCCTAAAAACCGAGGACACGGCCGTGTATTACTGTACCACAGACGAGGGTTTGGGCT  270
V  95.7% (245/256)  IGHV3-15*01  227  .......A.A........A..................G..............A.......................--------------  302
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  T                 
D  100.0% (7/7)     IGHD3-16*01  14   ---------------------------------------------------------------------------------.......--  20

                                                                       
                                      F  G  Q  G  T  L  V  T  V  S  S  
                    Query_13711  271  TTGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (31/31)   IGHJ4*02     18   --...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_351036

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           416     2e-118
IGHD1-26*01                                                                                           10.3    133   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAC	GTGGG	G	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCACGTGGGGCTACTTTGACTAC	ARDLTWGYFDY	289	321	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	281	15	0	94.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_13712  1    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACC  90
V  94.9% (281/296)  IGHV1-18*01  1    .....T.....G...........................................A..................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       T  F  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  N  T  Y  N  G  D  T  K  Y 
                    Query_13712  91   ACCTTTGCTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAAGGATCAACACTTACAATGGTGACACAAAGTAT  180
V  94.9% (281/296)  IGHV1-18*01  91   .G..A..G.................................................T......G.G...........A.......C...  180
                                       S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  G  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 
                    Query_13712  181  GCACAGGGGCTCCAGGGCAGAGTCACCATGACCACAGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGCCTGAGATCTGACGAC  270
V  94.9% (281/296)  IGHV1-18*01  181  ......AA..................................................................................  270
                                       A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D 

                                      -----------------><-----------CDR3-IMGT----------->                                  
                                       T  A  I  Y  Y  C  A  R  D  L  T  W  G  Y  F  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_13712  271  ACGGCCATATATTACTGTGCGAGAGATCTCACGTGGGGCTACTTTGACTACTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  355
V  94.9% (281/296)  IGHV1-18*01  271  ......G.G.................-----------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                              
D  100.0% (5/5)     IGHD1-26*01  7    --------------------------------.....------------------------------------------------  11
J  97.9% (46/47)    IGHJ4*02     2    --------------------------------------..........................C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_351031

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           299     2e-83
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CTC	TAGCAGCATCTGG	GGTTGGCGCTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTCTAGCAGCATCTGGGGTTGGCGCTCACTACTACGGTGCGGACGTC	ATLAASGVGAHYYGADV	230	280	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	21	3	0	87.5
FR2-IMGT	41	91	51	48	3	0	94.1
CDR2-IMGT	92	115	24	24	0	0	100
FR3-IMGT	116	229	114	105	9	0	92.1
CDR3-IMGT (germline)	230	233	4	4	0	0	100
Total	N/A	N/A	221	206	15	0	93.2


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  L  T  F  S  I  Y  G  M  H  W  V  R  Q  A  P  D  R  G  L  E  W  V  A  V  I  W  Y  D
                    Query_13713  13   GTCTGGACTCACCTTCAGTATCTATGGAATGCACTGGGTCCGCCAGGCTCCAGACAGGGGACTGGAGTGGGTGGCAGTTATATGGTATGA  102
V  93.2% (206/221)  IGHV3-33*01  72   .......T............G......C.........................G..A...G.............................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  D  T  L  Y  L  Q  M  N
                    Query_13713  103  TGGAAGTAATAAATTTTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGGACACGTTGTATCTGCAAATGAA  192
V  93.2% (206/221)  IGHV3-33*01  162  ..............AC...................................................A.....C................  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><--------------------CDR3-IMGT-------------------->  
                                        S  L  T  V  E  D  T  A  V  Y  Y  C  A  T  L  A  A  S  G  V  G  A  H  Y  Y  G  A  D  V  W
                    Query_13713  193  CAGTCTGACAGTGGAGGACACGGCTGTGTATTATTGTGCGACTCTAGCAGCATCTGGGGTTGGCGCTCACTACTACGGTGCGGACGTCTG  282
V  93.2% (206/221)  IGHV3-33*01  252  ...C....G..CC....................C.......-------------------------------------------------  292
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A                                                   
D  92.3% (12/13)    IGHD6-13*01  6    --------------------------------------------........G....---------------------------------  18
J  96.2% (51/53)    IGHJ6*02     10   --------------------------------------------------------------------...........AT.........  31

                                                                     
                                        G  Q  G  T  T  V  T  V  S  S 
                    Query_13713  283  GGGCCAAGGGACCACGGTCACCGTCTCCTCA  313
J  96.2% (51/53)    IGHJ6*02     32   ...............................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_351033

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           450     9e-129
IGHD6-13*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCAC	ATAGCAGCAGCTGGT	CGGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTAC	ARSHSSSWSGFDY	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	7	77	71	71	0	0	100
CDR1-IMGT	78	101	24	24	0	0	100
FR2-IMGT	102	152	51	50	1	0	98
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	114	0	0	100
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	290	289	1	0	99.7


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  
                    Query_13714  7    TGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCT  96
V  99.7% (289/290)  IGHV5-51*03  5    ..........................................................................................  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  K  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  
                    Query_13714  97   ACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGAAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCC  186
V  99.7% (289/290)  IGHV5-51*03  95   .........................................G................................................  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  
                    Query_13714  187  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCG  276
V  99.7% (289/290)  IGHV5-51*03  185  ..........................................................................................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><--------------CDR3-IMGT-------------->                                  
                                      A  M  Y  Y  C  A  R  S  H  S  S  S  W  S  G  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13714  277  CCATGTATTACTGTGCGAGATCACATAGCAGCAGCTGGTCGGGCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  363
V  99.7% (289/290)  IGHV5-51*03  275  ....................-------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                    
D  100.0% (15/15)   IGHD6-13*01  5    ------------------------...............------------------------------------------------  19
J  100.0% (44/44)   IGHJ4*02     5    -------------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_351032

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           329     3e-92
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	AGCCTTTCACA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGAGAAGCCTTTCACATTGACTAC	GREAFHIDY	243	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  R  S  S  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_13715  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGGAGTTCTAGCATGACCTGGGTCCGCCAGGCTCCGGGGAAGGGACTGG  90
V  92.0% (230/250)  IGHV3-21*01  47   ....................................C......T..C.A........A..................A........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  N  S  A  S  N  F  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_13715  91   AGTGGGTCTCATCCATTAATAGTGCTAGTAATTTCATATACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  92.0% (230/250)  IGHV3-21*01  137  ..................G....AG.....G..A....................................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------CDR3-IMGT--------> 
                                      K  N  S  V  F  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  F  C  G  R  E  A  F  H  I  D  Y  
                    Query_13715  181  AGAACTCAGTCTTTCTGCAGATGAGCAGCCTGAGAGCCGAGGACACGGCTGTGTATTTCTGTGGGAGAGAAGCCTTTCACATTGACTACT  270
V  92.0% (230/250)  IGHV3-21*01  227  ........C.G.A......A....A................................A.....C......--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
J  100.0% (42/42)   IGHJ4*02     7    ---------------------------------------------------------------------------------.........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13715  271  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  303
J  100.0% (42/42)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_154665

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           439     2e-125
IGHD6-6*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	GTATAGCAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTATAGCAGCTCGTCCTTGGTCTGACTAC	ARGIAARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	285	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  R  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  F
                    Query_13716  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAGGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTT  90
V  98.6% (285/289)  IGHV5-51*03  6    ................................A........................................................A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  L  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_13716  91   CTGGCTCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.6% (285/289)  IGHV5-51*03  96   ....A.....................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13716  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.6% (285/289)  IGHV5-51*03  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  H  Y  C  A  R  G  I  A  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13716  271  CATGCATTACTGTGCGAGAGGTATAGCAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  98.6% (285/289)  IGHV5-51*03  276  ....T..............----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (16/16)   IGHD6-6*01   3    --------------------................-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_154664

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           325     3e-91
IGHD2-15*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGCCCGCTGCCC	GTGGTGGGTGCTA	N/A	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGATCAGCCCGCTGCCCGTGGTGGGTGCTATGACTAC	VRDQPAARGGCYDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	229	21	0	91.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  G  F  T  L  R  S  H  W  M  H  W  V  R  Q  D  P  G  K  G  L  
                    Query_13717  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGGATTCACCCTCAGAAGCCACTGGATGCACTGGGTCCGCCAAGATCCAGGGAAGGGGCTGG  90
V  91.6% (229/250)  IGHV3-74*01  47   .....................C................T....T...T........................C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  A  R  I  N  F  D  G  S  S  T  S  Y  V  D  S  V  K  G  R  F  N  I  S  R  D  N  A  
                    Query_13717  91   TATGGGTCGCACGTATTAATTTTGATGGGAGTAGTACAAGTTATGTGGACTCCGTCAAGGGCCGATTCAACATCTCCAGAGACAACGCCA  180
V  91.6% (229/250)  IGHV3-74*01  137  .G......T...........AG............C.....C..C.C.........G.............C....................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  G  V  Y  Y  C  V  R  D  Q  P  A  A  R  G  
                    Query_13717  181  AGAACACATTGTATCTGCAAATGAATAGTCTGAGAGTCGAGGACACGGGTGTGTATTACTGTGTAAGAGATCAGCCCGCTGCCCGTGGTG  270
V  91.6% (229/250)  IGHV3-74*01  227  .......GC................C..........C...........C..............C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.6% (11/13)    IGHD2-15*01  15   ------------------------------------------------------------------------------------.....A  20

                                      ------------->                                  
                                      G  C  Y  D  Y  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_13717  271  GGTGCTATGACTACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  318
D  84.6% (11/13)    IGHD2-15*01  21   .C.....-----------------------------------------  27
J  97.6% (40/41)    IGHJ4*02     8    -------...................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_154667

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            327     9e-92
IGHD6-6*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAAG	GGGC	GTATAGCAGCTCGTCC	GGGGGACC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAAAGGGGCGTATAGCAGCTCGTCCGGGGGACCCTTTGACCAC	AKGAYSSSSGGPFDH	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	229	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  A  S  G  F  N  F  D  D  Y  A  M  Y  W  V  R  Q  P  P  G  K  G  L  
                    Query_13718  1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCAATTTTGATGATTATGCCATGTATTGGGTCCGACAACCTCCAGGGAAGGGCCTGG  90
V  92.0% (229/249)  IGHV3-9*01   47   .....................C..............CC..................C.C........G...G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  W  N  S  D  T  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13718  91   AGTGGGTCTCGGGTATTAGTTGGAATAGTGACACCATAGGGTATGCGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGATAACGCCA  180
V  92.0% (229/249)  IGHV3-9*01   137  ..........A...................GT.G......C.........................................C.......  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  T  R  L  G  A  K  D  T  A  F  Y  Y  C  A  K  G  A  Y  S  S  S  S  
                    Query_13718  181  AGAACTCCCTCTATCTGCAAATGACCAGACTGGGGGCTAAGGACACGGCCTTCTATTACTGTGCAAAAGGGGCGTATAGCAGCTCGTCCG  270
V  92.0% (229/249)  IGHV3-9*01   227  ..........G.............A...T...A.A...G.............G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K                       
D  100.0% (16/16)   IGHD6-6*01   3    -------------------------------------------------------------------------................-  18

                                      ---------------->                                  
                                      G  G  P  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13718  271  GGGGACCCTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  97.7% (43/44)    IGHJ4*02     5    -------.......T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_154661

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           344     6e-97
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	N/A	GTATTACTATGATACTGATGGTCATTAC	CGCTTGGGTAGCCCCCCA	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGAGTATTACTATGATACTGATGGTCATTACCGCTTGGGTAGCCCCCCAGACTTC	AKEYYYDTDGHYRLGSPPDF	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  H  G  M  H  W  V  R  Q  S  P  G  K  G  L  
                    Query_13719  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACTACCCACGGCATGCACTGGGTCCGCCAGTCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-30*18  47   ..........................................G..G.T.T.....................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13719  91   AGTGGGTGGCAGTTATATCATATGATGGAAGTAATAAATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-30*18  137  ........................................C.................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  D  Q  V  S  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  E  Y  Y  Y  D  T  D  
                    Query_13719  181  AGGACCAGGTGTCTCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTCTATACTACTGTGCGAAGGAGTATTACTATGATACTGATG  270
V  94.0% (235/250)  IGHV3-30*18  227  ..A..AC.C...A.....................................G.G..T...........A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  85.7% (24/28)    IGHD3-22*01  1    ----------------------------------------------------------------------..............G.AG..  20

                                      R3-IMGT------------------------>                                  
                                      G  H  Y  R  L  G  S  P  P  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13719  271  GTCATTACCGCTTGGGTAGCCCCCCAGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  85.7% (24/28)    IGHD3-22*01  21   ..T.....----------------------------------------------------------  28
J  97.5% (39/40)    IGHJ4*02     9    --------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_154660

Length=364
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           279     3e-77
IGHD6-19*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	59	30	23	1	6	76.7
FR2-IMGT	60	110	51	45	6	0	88.2
CDR2-IMGT	111	131	21	15	6	0	71.4
FR3-IMGT	132	245	114	106	8	0	93
CDR3-IMGT (germline)	246	253	8	8	0	0	100
Total	N/A	N/A	250	216	28	6	86.4


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G  
                    Query_13720  4    CCCTGAGACTCTCCTGTGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGCC  93
V  86.4% (216/250)  IGHV4-34*01  50   .....TCC...A....C.....C..T............------........C.......G....AT.........C...........G.  133
                                         L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S  
                    Query_13720  94   TGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCCA  183
V  86.4% (216/250)  IGHV4-34*01  134  ....G................A..A.AG.....G..C.........C.C.......A................A................  223
                                      L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G  
                    Query_13720  184  AGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGCT  273
V  86.4% (216/250)  IGHV4-34*01  224  ...................GC............C........................C...........--------------------  293
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                    
D  91.7% (11/12)    IGHD6-19*01  7    --------------------------------------------------------------------------------....G.....  16

                                      R3-IMGT------------------------>                                 
                                      W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_13720  274  GGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  338
D  91.7% (11/12)    IGHD6-19*01  17   ..---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   -----------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35584167


Query= Query_154663

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD5-12*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	TGTGTACGAGGCGACTCATCA	ATATAGTGGCTAC	ATGATTAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGGAAGATGTGTACGAGGCGACTCATCAATATAGTGGCTACATGATTAATGACTAC	GEDVYEATHQYSGYMINDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  K  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13721  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAAGTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   .............................................GC...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  E  S  G  A  S  T  N  H  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13721  91   AATGGGTCTCAGGTATCAGTGAGAGCGGTGCTAGCACAAATCACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  .G..........C...T....GT..T....G.......T.CT................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  I  S  L  R  V  E  D  T  A  V  Y  Y  C  G  E  D  V  Y  E  A  T  H  
                    Query_13721  181  AGAACACGCTGTATCTGCAAATGATCAGCCTGAGAGTCGAGGACACGGCCGTATATTACTGTGGGGAAGATGTGTACGAGGCGACTCATC  270
V  93.6% (234/250)  IGHV3-23*01  227  ........................A...........C..........................C.A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -IMGT----------------------->                                  
                                      Q  Y  S  G  Y  M  I  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13721  271  AATATAGTGGCTACATGATTAATGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  100.0% (13/13)   IGHD5-12*01  5    -.............-------------------------------------------------  17
J  100.0% (41/41)   IGHJ4*02     8    ----------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_279104

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           355     3e-100
IGHD1-26*01                                                                                           23.8    0.011 
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGTCCGGAG	GTGGGAGCTACT	CGTGGTCCTTTTC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGTCCGGAGGTGGGAGCTACTCGTGGTCCTTTTCCTAC	ARGSGGGSYSWSFSY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  S  L  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13722  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTACCTATAGCTTGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-21*01  47   .............................................G.......A...A................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  T  S  S  S  S  Y  M  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13722  91   AGTGGGTCTCATCCATTACTAGTAGTAGTAGTTACATGAACTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  95.6% (238/249)  IGHV3-21*01  137  ..................G..................AT...................................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  S  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  R  G  S  G  G  G  S  Y  
                    Query_13722  181  AGAGCTCCCTGTTTCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTCTATTTCTGTGCGAGAGGGTCCGGAGGTGGGAGCTACT  270
V  95.6% (238/249)  IGHV3-21*01  227  ...A...A....A.......................................G....A...........---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (12/12)   IGHD1-26*01  7    ------------------------------------------------------------------------------............  18

                                      ---------------->                                  
                                      S  W  S  F  S  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13722  271  CGTGGTCCTTTTCCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (38/38)   IGHJ4*02     11   -------------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_154669

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           263     2e-72
IGHD2-8*02                                                                                            16.1    2.3  
IGHJ4*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-8*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGATGCGGCGGAGTGAATTCGGC	ACTGGTGG	GG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGATGCGGCGGAGTGAATTCGGCACTGGTGGGGACTTCTTTGACCAC	ARMRRSEFGTGGDFFDH	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	20	10	0	66.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	94	20	0	82.5
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	207	39	0	84.1


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  L  R  S  V  S  F  L  W  S  W  V  R  Q  D  P  G  K  G 
                    Query_13723  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCCTGAGGAGTGTGTCTTTCCTCTGGAGCTGGGTCCGCCAGGACCCAGGGAAGGGC  90
V  84.1% (207/246)  IGHV4-31*03  49   ....................................A.C..C....GTGG..A.TA..........A........C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  R  Y  Y  S  G  S  S  R  Y  N  P  S  L  G  S  R  V  S  M  S  L  D  T  S 
                    Query_13723  91   CTGGAGTGGATTGGTTACAGGTATTACAGTGGAAGTAGTCGGTATAATCCGTCCCTCGGGAGTCGAGTTTCCATGTCACTAGACACGTCT  180
V  84.1% (207/246)  IGHV4-31*03  139  ..............G....TC...........G..C.CCTAC..C..C.........AA..........A....A...G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       R  N  Q  F  S  L  K  L  T  S  V  T  T  A  D  T  A  I  Y  Y  C  A  R  M  R  R  S  E  F  G 
                    Query_13723  181  AGGAACCAATTTTCCCTGAAGTTGACCTCAGTGACGACCGCGGACACGGCCATCTATTACTGTGCGCGGATGCGGCGGAGTGAATTCGGC  270
V  84.1% (207/246)  IGHV4-31*03  229  .A......G..C.........C...G...T.....TG..............G.G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         

                                      MGT-------------------->                                  
                                       T  G  G  D  F  F  D  H  W  G  Q  G  A  L  V  T  V  S  S  
                    Query_13723  271  ACTGGTGGGGACTTCTTTGACCACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTCAG  328
D  100.0% (8/8)     IGHD2-8*02   11   ........--------------------------------------------------  18
J  93.8% (45/48)    IGHJ4*02     1    ----------...A.......T..............A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_154668

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           322     2e-90
IGHD3-10*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGAGTAAATCC	ATGGTTCGGGGTGTTA	CCCCCGCGGG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGAGTAAATCCATGGTTCGGGGTGTTACCCCCGCGGGCTAC	AGSKSMVRGVTPAGY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	242	3	3	0	0	100
Total	N/A	N/A	242	224	18	0	92.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  S  V  T  S  N  Y  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13724  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGGTTCAGCGTCACTAGCAACTACATGAATTGGGTCCGGCAGGCTCCAGGGAAGGGGCTGG  90
V  92.6% (224/242)  IGHV3-53*01  47   ....................G...............C.....G..............GC........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  H  S  G  G  T  T  Y  Y  A  D  S  V  K  G  R  F  S  I  F  R  D  S  T  K  
                    Query_13724  91   AGTGGGTCTCAGTTATTCATAGCGGGGGTACCACATACTACGCAGACTCCGTGAAGGGCCGATTCAGCATCTTTAGAGACAGTACTAAGA  180
V  92.6% (224/242)  IGHV3-53*01  137  .................T.......T....G...................................C.....CC.......A.T.C....  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------CDR3-IMGT----
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  G  S  K  S  M  V  R  G  V  
                    Query_13724  181  ACACCCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTCTACTACTGTGCGGGGAGTAAATCCATGGTTCGGGGTGTTA  270
V  92.6% (224/242)  IGHV3-53*01  227  ....G............................................G..T.........----------------------------  288
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                             
D  93.8% (15/16)    IGHD3-10*01  9    --------------------------------------------------------------------------...........A....  24

                                      ------------->                                  
                                      T  P  A  G  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13724  271  CCCCCGCGGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  100.0% (38/38)   IGHJ4*02     11   ----------......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_332111

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           343     2e-96
IGHD6-19*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	CGGATGGGCCGGGTCGGTGGCG	TAGCAGTGGCTGGTAC	GAACCGT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGCGGATGGGCCGGGTCGGTGGCGTAGCAGTGGCTGGTACGAACCGTACTACTTTGACTAC	AKADGPGRWRSSGWYEPYYFDY	240	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	239	114	109	2	3	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	249	236	10	3	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  F  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13725  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCTTCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGACTGG  90
V  94.8% (236/249)  IGHV3-23*01  47   ............................................AG.......................................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  A  N  S  D  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  I  S  
                    Query_13725  91   AGTGGGTCTCATCTATTAGTGCTAATAGTGATAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACATTTCCA  180
V  94.8% (236/249)  IGHV3-23*01  137  ...........G.........G..G.G...G.....................................................A.....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N     L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  A  D  G  P  G  R  W  
                    Query_13725  181  AGAAC---TTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGCGGATGGGCCGGGTCGGTGGC  267
V  94.8% (236/249)  IGHV3-23*01  227  .....ACGC............................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       

                                      -CDR3-IMGT--------------------------->                                  
                                      R  S  S  G  W  Y  E  P  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13725  268  GTAGCAGTGGCTGGTACGAACCGTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  339
D  100.0% (16/16)   IGHD6-19*01  6    -................-------------------------------------------------------  21
J  100.0% (48/48)   IGHJ4*02     1    ------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_310982

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           336     1e-94
IGHD1-7*01                                                                                            12.2    31   
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD1-7*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	TCGGGGGGGGG	GGAACT	CGGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGATCGGGGGGGGGGGAACTCGGGGACTACTTTGACTAC	ARSGGGELGDYFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	245	230	15	0	93.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  R  L  
                    Query_13726  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGAGGCTGG  90
V  93.9% (230/245)  IGHV3-53*01  47   ...................................................................................G......  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  S  I  F  S  N  G  N  T  Y  Y  T  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  
                    Query_13726  91   AGTGGGTCTCAAGCATTTTTAGTAATGGTAACACATACTACACAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGA  180
V  93.9% (230/245)  IGHV3-53*01  137  ...........GTT....A...CGG.....G..........G................................................  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                      N  T  V  Y  L  Q  V  H  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  G  G  G  E  L  G  D  
                    Query_13726  181  ACACGGTGTATCTTCAGGTGCACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCAAGATCGGGGGGGGGGGAACTCGGGGACT  270
V  93.9% (230/245)  IGHV3-53*01  227  .....C..........AA..A........................................G...-------------------------  291
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (6/6)     IGHD1-7*01   10   ----------------------------------------------------------------------------......--------  15
J  95.8% (46/48)    IGHJ4*02     1    ---------------------------------------------------------------------------------------...  3

                                      ---------->                                  
                                      Y  F  D  Y  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_13726  271  ACTTTGACTACTGGGGCCAGGGATCCCTGGTCATCGTCTCCTCAG  315
J  95.8% (46/48)    IGHJ4*02     4    .......................A.........C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_310983

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     1e-95
IGHJ6*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13727  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   ...............................G.......A...G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N 
                    Query_13727  91   TGGATTGGCTATATCTACTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G........T.........A...............C...................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_13727  181  CAGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGAC  270
V  94.3% (231/245)  IGHV4-59*01  229  .........C....G.....C..........................G...........G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  93.1% (54/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC...............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_13727  271  GTCTGGGGCCAAGGGACCACGGTAATCGTCTCCTCA  306
J  93.1% (54/58)    IGHJ6*02     27   .......................C.C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_310980

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           413     2e-117
IGHD5-18*01                                                                                           19.9    0.18  
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	N/A	GTGGACACACCTATGG	AGCCCGAACCGACCCCCATC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGTGGACACACCTATGGAGCCCGAACCGACCCCCATCTTGACTAC	ARRGHTYGARTDPHLDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	277	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  I  F  R  T  Y
                    Query_13728  1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACATCTTTAGAACCTA  90
V  95.5% (277/290)  IGHV5-51*01  6    ....................C.............................A..........................G.....CC.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  V  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_13728  91   CTGGGTCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  95.5% (277/290)  IGHV5-51*01  96   ....A...G.................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  H  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  A
                    Query_13728  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACCACTCCATTAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACCCCGC  270
V  95.5% (277/290)  IGHV5-51*01  186  ..................................A.G.....C..........................................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        I  Y  Y  C  A  R  R  G  H  T  Y  G  A  R  T  D  P  H  L  D  Y  W  G  Q  G  T  L  V  S  V
                    Query_13728  271  CATATATTACTGTGCGAGACGTGGACACACCTATGGAGCCCGAACCGACCCCCATCTTGACTACTGGGGCCAGGGAACCCTGGTCTCCGT  360
V  95.5% (277/290)  IGHV5-51*01  276  ...G................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  87.5% (14/16)    IGHD5-18*01  1    --------------------.....T...G......------------------------------------------------------  16
J  97.6% (41/42)    IGHJ4*02     7    --------------------------------------------------------.............................A....  40

                                              
                                        S  S  
                    Query_13728  361  CTCCTCAG  368
J  97.6% (41/42)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_174718

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           286     2e-79
IGHD3-16*02                                                                                           27.6    9e-04
IGHJ3*01                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATAGCTATA	ATGTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATAGCTATAATGTC	ARGLLIEDPNYVWGSFRRNHNSYNV	261	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	41	10	0	80.4
CDR2-IMGT	126	146	21	16	5	0	76.2
FR3-IMGT	147	260	114	94	20	0	82.5
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	225	42	0	84.3


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  
                    Query_13729  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCACTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGC  90
V  84.3% (225/267)  IGHV4-59*01  26   ................T..............C.........A....C.......G.......A...G..........AG....A.C....  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  R  G  L  E  W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  
                    Query_13729  91   AGCCTCCAGGGAGGGGACTGGAGTGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCC  180
V  84.3% (225/267)  IGHV4-59*01  116  ....C.......A.............A....G.ATA...AT.A..G..........A..............C...A......A......A  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      L  S  G  D  M  S  R  N  Q  L  S  L  N  L  I  D  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  
                    Query_13729  181  TGTCAGGAGACATGTCTAGGAATCAGTTGTCCCTCAACCTGATCGATGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTC  270
V  84.3% (225/267)  IGHV4-59*01  206  .A....T.....C...C.A...C.....C.....G..G....G.TC......................GT.....A...........---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -----------------------CDR3-IMGT-------------------------------->                         
                                      L  L  I  E  D  P  N  Y  V  W  G  S  F  R  R  N  H  N  S  Y  N  V  W  G  Q  G  T  P  V  T  
                    Query_13729  271  TTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATAGCTATAATGTCTGGGGCCAAGGGACACCGGTCACCG  360
D  94.1% (16/17)    IGHD3-16*02  14   -----------------------.............A...--------------------------------------------------  30
J  94.9% (37/39)    IGHJ3*01     12   ------------------------------------------------------------....................AT........  41

                                               
                                      V  S  S  
                    Query_13729  361  TCTCTTCAG  369
J  94.9% (37/39)    IGHJ3*01     42   .........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_310986

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           353     9e-100
IGHD3-22*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              77.6    1e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTTTG	ACTATGATAGTAGTGGT	ACTTACCACGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTTGACTATGATAGTAGTGGTACTTACCACGTTTTTGACTAC	ARFDYDSSGTYHVFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	242	234	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13730  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTCCTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  96.7% (234/242)  IGHV4-59*01  49   ..............................................A...........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  R  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  R  N 
                    Query_13730  91   TGGATTGGATATATCTATTACAGGGGCAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCATTAGACACGTCCAGGAAC  180
V  96.7% (234/242)  IGHV4-59*01  139  ........G..............T..G..C..........................................G............A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  D  Y  D  S  S  G  T  Y 
                    Query_13730  181  CAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTTTGACTATGATAGTAGTGGTACTTAC  270
V  96.7% (234/242)  IGHV4-59*01  229  ....................C.........................................----------------------------  290
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (17/17)   IGHD3-22*01  6    -------------------------------------------------------------------.................------  22

                                      -------------->                                  
                                       H  V  F  D  Y  W  G  Q  G  T  L  V  P  V  S  S  
                    Query_13730  271  CACGTTTTTGACTACTGGGGCCAGGGAACCCTGGTCCCCGTCTCCTCAG  319
J  97.7% (42/43)    IGHJ4*02     6    ------..............................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_310987

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           333     1e-93
IGHD5-18*01                                                                                           21.8    0.041
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGAA	GTGGATACAACTTTGGT	CAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGAAGTGGATACAACTTTGGTCATAACTGGTTCGACCCC	ARDPTGSGYNFGHNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	229	16	0	93.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  S  H  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13731  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATAAGTCATTACTACTGGAGTTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAA  90
V  93.5% (229/245)  IGHV4-59*01  49   ...............................G......C...AG............C................................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  T  S  V  D  T  T  K  N 
                    Query_13731  91   TGGATTGGATATATCCATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCACGTCAGTAGACACGACCAAGAAC  180
V  93.5% (229/245)  IGHV4-59*01  139  ........G......T...................................................TA............T........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  S  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_13731  181  CAGTTCTCCCTGAGCCTCAGTTCTGTGACCGTTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCCTACCGGAAGTGGATACAACTTT  270
V  93.5% (229/245)  IGHV4-59*01  229  .............AG..G..C..........C.................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.2% (15/17)    IGHD5-18*01  1    ----------------------------------------------------------------------------.........G..A.  14

                                      -------------------->                                  
                                       G  H  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13731  271  GGTCATAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTAACCGTCTCCTCAG  325
D  88.2% (15/17)    IGHD5-18*01  15   ...----------------------------------------------------  17
J  98.0% (48/49)    IGHJ5*02     3    ------...................................C.............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_174713

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           344     6e-97
IGHD4-4*01                                                                                            19.9    0.15 
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD4-4*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGCCTT	TGACTACTATAACTAC	TACTAT	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGCCTTTGACTACTATAACTACTACTATTTCGACCCC	ARDAFDYYNYYYFDP	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  L  T  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13732  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCAACCTCACTAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-30*04  47   ............................T.......C.T...G...C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  S  Y  D  G  T  D  K  Y  Y  A  D  S  V  K  G  R  F  S  I  S  R  D  K  S  
                    Query_13732  91   AGTGGGTGGCAATTATTTCATATGATGGAACTGATAAATACTACGCAGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAGACAAATCCA  180
V  94.0% (235/250)  IGHV3-30*04  137  ...........G....A.............G.A....................................C...............T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  D  A  F  D  Y  Y  N  
                    Query_13732  181  AGAACACGCTGTATCTACAGATGAACAGCCTGAGAGTTGAGGACACGGCTGTATATTACTGTGCGAGAGACGCCTTTGACTACTATAACT  270
V  94.0% (235/250)  IGHV3-30*04  227  ................G..A................C...............G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.5% (14/16)    IGHD4-4*01   1    ----------------------------------------------------------------------------.......AG.....  14

                                      ---------------->                                  
                                      Y  Y  Y  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13732  271  ACTACTATTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  321
D  87.5% (14/16)    IGHD4-4*01   15   ..-------------------------------------------------  16
J  97.7% (42/43)    IGHJ5*02     9    --------......................................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_174712

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           367     6e-104
IGHD6-19*01                                                                                           12.2    35    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGCG	GCTCCAG	GGCTGG	GATT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCTCCAGGGCTGGGATTCTTTGACTAT	AAPGLGFFDY	291	320	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	67	8	0	89.3
CDR1-IMGT	78	101	24	18	6	0	75
FR2-IMGT	102	152	51	51	0	0	100
CDR2-IMGT	153	176	24	20	4	0	83.3
FR3-IMGT	177	290	114	104	10	0	91.2
CDR3-IMGT (germline)	291	293	3	3	0	0	100
Total	N/A	N/A	291	263	28	0	90.4


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  A  C  K  A  S  G  N  T  L  T 
                    Query_13733  3    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCGTCGGTGAAAGTTGCCTGCAAGGCATCCGGAAACACCCTCACC  92
V  90.4% (263/291)  IGHV1-46*01  1    .....G.....G...........G.......................C..A.....G...T.............T...T.....T.....  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  N  F  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  N  K  T  T  Y 
                    Query_13733  93   AACAACTTCATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAATAATCAACCCTAGTGGTAATAAGACAACCTAT  182
V  90.4% (263/291)  IGHV1-46*01  91   .G.T...AT..................................................................GG..GC....G...C  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  L  T  M  T  R  V  T  S  T  R  T  V  Y  M  E  L  S  N  L  R  S  E  D 
                    Query_13733  183  GCACAGAAGTTCCAGGGCAGACTGACCATGACTAGGGTCACGTCCACGAGAACAGTCTACATGGAGCTGAGCAACCTGAGGTCTGAGGAC  272
V  90.4% (263/291)  IGHV1-46*01  181  .....................G.C........C....A............C......................G......A.........  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><----------CDR3-IMGT--------->                                  
                                       T  A  V  Y  Y  C  A  A  P  G  L  G  F  F  D  Y  W  G  Q  G  T  L  V  T  V  S  P  
                    Query_13733  273  ACGGCCGTGTATTACTGCGCGGCTCCAGGGCTGGGATTCTTTGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCCCAG  354
V  90.4% (263/291)  IGHV1-46*01  271  .................T...-------------------------------------------------------------  291
                                       T  A  V  Y  Y  C  A                                                              
D  100.0% (6/6)     IGHD6-19*01  13   ----------------------------......------------------------------------------------  18
J  95.5% (42/44)    IGHJ4*02     5    --------------------------------------.........C..............................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_174711

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           293     2e-81
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGCAACTGGTTCGACCCC	ARGGWRRQRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	216	29	0	88.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  V  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_13734  1    ACCCTGTCCCTCACCTGCGCTGTGGTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  88.2% (216/245)  IGHV4-34*01  49   .......................CTA..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  A  R  Y  N  S  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_13734  91   TGGATTGGGGAAATCAGTCATAGTGGAAGTGCGAGGTACAACTCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAA  180
V  88.2% (216/245)  IGHV4-34*01  139  ................A............CA.C.AC......C..T......A...............A....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W 
                    Query_13734  181  CAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTATTGTGCGCGAGGGGGCTGGCGAAGACAGCGCAACTGG  270
V  88.2% (216/245)  IGHV4-34*01  229  ..GT...........C..A......T.....................G.....C......A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (49/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------.......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13734  271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (49/50)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_310989

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           310     1e-86
IGHD3-3*01                                                                                            10.3    119  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGACACAG	TTTTT	AGTTTCCAC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACACAGTTTTTAGTTTCCACTTCGACCCC	ARVDTVFSFHFDP	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	224	26	0	89.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  F  F  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_13735  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGTAGCGGTAGTTTCTTTTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  89.6% (224/250)  IGHV4-61*01  49   .........................................C..T.......A..AC....G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  A  Y  I  S  Y  S  G  R  T  K  S  N  P  S  L  K  S  R  V  T  M  S  I  D  T  S 
                    Query_13735  91   CTGGAATGGCTTGCCTATATCTCTTACAGTGGGAGAACCAAGTCTAATCCCTCTCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCC  180
V  89.6% (224/250)  IGHV4-61*01  139  .....G...A...GG.......A............C.....C.AC..C.....C....................A...G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  V  D  T  V  F  S  F 
                    Query_13735  181  AAGAACCAATTCTCCCTGAGGCTGACTTCCGTGACCGCTGCGGACACGGCCGTTTATTTCTGTGCGAGAGTGGACACAGTTTTTAGTTTC  270
V  89.6% (224/250)  IGHV4-61*01  229  ........G..........A.....GC..T.......................G....A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD3-3*01   10   -------------------------------------------------------------------------------.....------  14

                                      ----------->                                  
                                       H  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13735  271  CACTTCGACCCCTGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  316
J  97.7% (42/43)    IGHJ5*02     9    ---.......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_174717

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           335     4e-94
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_13736  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.9% (229/244)  IGHV4-59*01  49   .......................................AG....T..............A.............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13736  91   TGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAT  180
V  93.9% (229/244)  IGHV4-59*01  139  ..........AT...T...................................A......................A..............C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  S  G  W  L  A  D  F  W 
                    Query_13736  181  CAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTAGTGGGTGGCTGGCTGACTTCTGG  270
V  93.9% (229/244)  IGHV4-59*01  229  ...................G...........................G..T..C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18
J  97.6% (40/41)    IGHJ4*02     8    --------------------------------------------------------------------------------.....A....  17

                                                                     
                                       G  Q  G  T  L  V  T  V  S  S  
                    Query_13736  271  GGCCAGGGAACCCTGGTCACCGTCTCCTCAG  301
J  97.6% (40/41)    IGHJ4*02     18   ...............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_174715

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           367     6e-104
IGHD3-10*01                                                                                           18.0    0.59  
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTC	TATTACTAT	CAATTAGACT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTATTACTATCAATTAGACTACTACTTTGACTAC	ARGLYYYQLDYYFDY	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	28	2	0	93.3
FR2-IMGT	60	110	51	50	1	0	98
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	114	0	0	100
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	242	7	0	97.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  D  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  L  G  K  G  
                    Query_13737  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCTAGGGAAGGGCC  93
V  97.2% (242/249)  IGHV4-31*03  50   .....TCC...A..................G.........C.....................................C...........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  
                    Query_13737  94   TGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCTA  183
V  97.2% (242/249)  IGHV4-31*03  140  ..........................................................................................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  Y  Y  Y  Q  L  
                    Query_13737  184  AGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCTCTATTACTATCAATTAG  273
V  97.2% (242/249)  IGHV4-31*03  230  .....................................................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD3-10*01  2    --------------------------------------------------------------------------.........-------  10

                                      ---------------->                                  
                                      D  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13737  274  ACTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  100.0% (48/48)   IGHJ4*02     1    ---................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_175445

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCCCT	TATCGCAGC	CTCTCATTTCAC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCCTTATCGCAGCCTCTCATTTCACTGACTAC	AALIAASHFTDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	269	17	0	94.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_13738  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTCAAGATCTCCTGTAAGGGCTCTGGATACAGCTTTACCACCTA  90
V  94.1% (269/286)  IGHV5-51*01  6    ................................................G.................T...................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  V  P  G  K  G  P  E  L  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_13738  91   CTGGATCGGCTGGGTGCGCCAGGTGCCCGGAAAAGGCCCGGAGTTGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGTCC  180
V  94.1% (269/286)  IGHV5-51*01  96   ......................A.......G.......T.....G..........................................C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  I  I  S  A  D  T  S  V  N  T  A  Y  L  Q  W  S  T  L  G  A  S  D  T  A
                    Query_13738  181  GTCCTTCCAAGGCCAGGTCATCATCTCAGCCGACACGTCCGTCAACACCGCCTACCTGCAGTGGAGCACCCTGGGGGCCTCCGACACCGC  270
V  94.1% (269/286)  IGHV5-51*01  186  ....................C..............A....A...G.......................G....AA......G........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  A  L  I  A  A  S  H  F  T  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13738  271  CATATATTACTGTGCGGCCCTTATCGCAGCCTCTCATTTCACTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  94.1% (269/286)  IGHV5-51*01  276  ...G............-------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                    
D  88.9% (8/9)      IGHD6-13*01  4    ---------------------...A.....-----------------------------------------------------  12
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_175446

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           335     4e-94
IGHD2-15*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	ACCCGTTTTGTCT	TGGCGGTAGATGC	ATCTCGGGCTTGAG	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGACCCGTTTTGTCTTGGCGGTAGATGCATCTCGGGCTTGAGTGACTTC	ARDPFCLGGRCISGLSDF	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	229	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  S  G  G  P  F  S  G  H  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13739  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGGCCCTTCAGTGGTCACTACTGGAACTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  93.9% (229/244)  IGHV4-34*01  49   .........................A.......T...........T.........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  R  G  G  S  T  T  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  N 
                    Query_13739  91   TGGATTGGGGAAATCAATCGTGGTGGAAGCACCACCTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCTGTAGACACGTCCAAGAAC  180
V  93.9% (229/244)  IGHV4-34*01  139  ...................A.A............A.................................A..A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  F  C  L  G  G  R  C 
                    Query_13739  181  CAATTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCTGTTTATTACTGTGCGCGAGACCCGTTTTGTCTTGGCGGTAGATGC  270
V  93.9% (229/244)  IGHV4-34*01  229  ..G...........G....G...........................G............A...--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  84.6% (11/13)    IGHD2-15*01  13   -----------------------------------------------------------------------------...T.....C...  25

                                      -------------------->                                  
                                       I  S  G  L  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13739  271  ATCTCGGGCTTGAGTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.6% (40/41)    IGHJ4*02     8    --------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_175447

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           293     2e-81
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GTTCTCC	ATTGTAGTAGTTCCAG	TCCCGGATGAAA	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGTTCTCCATTGTAGTAGTTCCAGTCCCGGATGAAAACTCCTACGGAATGGACGTC	AKEFSIVVVPVPDENSYGMDV	239	301	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	25	12	11	1	0	91.7
CDR1-IMGT	26	49	24	21	3	0	87.5
FR2-IMGT	50	100	51	46	5	0	90.2
CDR2-IMGT	101	124	24	19	5	0	79.2
FR3-IMGT	125	238	114	105	9	0	92.1
CDR3-IMGT (germline)	239	246	8	8	0	0	100
Total	N/A	N/A	233	210	23	0	90.1


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  T  T  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  S  V 
                    Query_13740  14   TGTGCAGCGTCTGGATTCACCTTTACCACCCATGCCATGAGCTGGGTCCGCCAGGCTCCAGGAAAGGGGCTGGAGTGGGTCGCAAGCGTT  103
V  90.1% (210/233)  IGHV3-23*01  64   ........C................G..G.T...............................G..................T..GCTA..  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       T  G  T  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  P  K  N  I  L  F  L 
                    Query_13740  104  ACTGGTACTGGAGGCAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACCCCAAGAACATCCTGTTTCTA  193
V  90.1% (210/233)  IGHV3-23*01  154  .G.....G...T..T.....................................................TT.........CG....A...G  243
                                       S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><--------------------------CDR3-IMGT---------
                                       Q  M  N  S  P  R  A  E  D  T  A  V  Y  Y  C  A  K  E  F  S  I  V  V  V  P  V  P  D  E  N 
                    Query_13740  194  CAGATGAACAGCCCGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAAGAGTTCTCCATTGTAGTAGTTCCAGTCCCGGATGAAAAC  283
V  90.1% (210/233)  IGHV3-23*01  244  ..A..........T.....................A.................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  93.8% (15/16)    IGHD2-2*01   6    ------------------------------------------------------------...........A....--------------  21
J  92.5% (49/53)    IGHJ6*02     10   ----------------------------------------------------------------------------------------..  11

                                      ----------------->                                 
                                       S  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  A  S 
                    Query_13740  284  TCCTACGGAATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCGCCTCA  334
J  92.5% (49/53)    IGHJ6*02     12   .A......T.................A..................T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_175441

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            291     5e-81
IGHD4-17*01                                                                                           14.1    8.5  
IGHJ3*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGAGGCAGCAGG	CGGTGAC	AGGGCG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGAGGCAGCAGGCGGTGACAGGGCGGCTTTTGATATC	ARDQEAAGGDRAAFDI	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	21	6	0	77.8
FR2-IMGT	55	105	51	46	5	0	90.2
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	98	16	0	86
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	217	31	0	87.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  R  K  P  N  W  W  F  W  V  R  Q  A  P  G  K  G  L 
                    Query_13741  1    ACCCTGTCCCTCACCTGCTCAGTCTCTGGGGGCTCCATCAGAAAACCTAACTGGTGGTTTTGGGTCCGCCAGGCCCCAGGGAAGGGTCTG  90
V  87.5% (217/248)  IGHV4-4*02   49   ..................G.T........T...........C.GTAG..........AG.............C.............G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  K  I  Y  H  S  G  T  T  N  Y  N  P  S  L  E  S  R  V  I  I  S  V  D  K  S  K 
                    Query_13741  91   GAGTGGATTGGGAAAATTTATCATAGTGGGACCACCAATTACAATCCGTCCCTCGAGAGTCGAGTCATCATTTCAGTGGACAAGTCCAAG  180
V  87.5% (217/248)  IGHV4-4*02   139  ............G....C.............G......C.....C.........A............C...A.....A............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                       N  V  F  S  L  R  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  Q  E  A  A  G  G  D 
                    Query_13741  181  AACGTCTTCTCCTTGCGGCTGACCTCTGTGACCGCCGCGGACACAGCCATATATTACTGTGCGAGAGATCAGGAGGCAGCAGGCGGTGAC  270
V  87.5% (217/248)  IGHV4-4*02   229  ...CAG......C..AA.....G.....................G...G.G.................----------------------  296
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD4-17*01  7    -----------------------------------------------------------------------------------.......  13

                                      ----------------->                                  
                                       R  A  A  F  D  I  W  G  Q  G  R  M  V  V  V  S  S  
                    Query_13741  271  AGGGCGGCTTTTGATATCTGGGGCCAAGGGAGAATGGTCGTCGTCTCTTCAG  322
J  93.5% (43/46)    IGHJ3*02     5    ------.........................C.......AC...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_175443

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*01                                                                                           321     7e-90
IGHD2-21*02                                                                                           12.2    32   
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGGAAA	GTGACT	TCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGGAAAGTGACTTCTTCTACTATTACGGTTTGGACGTC	ARAPESDFFYYYGLDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	15	9	0	62.5
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	227	22	0	91.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  F  N  W  I  R  Q  A  P  G  K  G  L  
                    Query_13742  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTACTACTTCAACTGGATCCGCCAGGCTCCAGGGAAGGGATTGG  90
V  91.2% (227/249)  IGHV3-11*01  47   .....................................................A.G.G...........................GC...  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  Y  I  S  P  S  G  A  T  K  Y  Y  A  G  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_13742  91   AGTGGGTTTCATACATTAGCCCGAGTGGTGCAACCAAGTACTACGCAGGCTCTGTGGAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  91.2% (227/249)  IGHV3-11*01  137  ...................TAGT......AGT....TA..........A.......A.................................  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      R  N  S  L  Y  L  Q  M  N  S  L  S  A  D  D  T  A  V  Y  Y  C  A  R  A  P  E  S  D  F  F  
                    Query_13742  181  GGAACTCACTCTATCTCCAAATGAACAGCCTGAGTGCCGACGACACGGCCGTATATTACTGTGCGAGAGCCCCGGAAAGTGACTTCTTCT  270
V  91.2% (227/249)  IGHV3-11*01  227  A.........G.....G.................A.....G...........G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD2-21*02  15   ------------------------------------------------------------------------------......------  20
J  92.7% (51/55)    IGHJ6*02     8    ----------------------------------------------------------------------------------------..  9

                                      T------------------>                                 
                                      Y  Y  Y  G  L  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_13742  271  ACTATTACGGTTTGGACGTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  323
J  92.7% (51/55)    IGHJ6*02     10   ....C......A................A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_99936

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           324     8e-91
IGHD3-9*01                                                                                            44.9    5e-09
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGACTTCA	TACGATATTTTGACTGGTTATTA	ACAGCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGACTTCATACGATATTTTGACTGGTTATTAACAGCTCTTGACTAT	ARGDFIRYFDWLLTALDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	226	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  K  G  Y  S  W  T  W  I  R  Q  P  P  G  K  E  L  E 
                    Query_13743  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCGTTCAAAGGTTACTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGAGCTGGAG  90
V  92.2% (226/245)  IGHV4-34*01  49   ...................................C....GT.......A.....G..........................G.......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  D  Y  S  G  N  T  D  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13743  91   TGGATTGGAGAAATCGATTATAGTGGAAACACCGACTACAGTCCGTCCCTCAAGAGTCGAGTCACCATATCTGTAGACACGTCCAAGAAC  180
V  92.2% (226/245)  IGHV4-34*01  139  ........G......A..C.........G....A......AC.............................A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  M  R  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  D  F  I  R  Y  F  D  W 
                    Query_13743  181  CAGTTCTCCCTGAAGATGAGGTCTGTTAGCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGACTTCATACGATATTTTGACTGG  270
V  92.2% (226/245)  IGHV4-34*01  229  ...............C....C.....G.C..................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (23/23)   IGHD3-9*01   5    -------------------------------------------------------------------------.................  21

                                      -------------------->                                  
                                       L  L  T  A  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13743  271  TTATTAACAGCTCTTGACTATTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  325
D  100.0% (23/23)   IGHD3-9*01   22   ......-------------------------------------------------  27
J  95.2% (40/42)    IGHJ4*02     7    -------------.......C.......................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_175448

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            294     6e-82
IGHD1-26*01                                                                                           10.3    117  
IGHJ6*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AAACTTTCGCGACATAT	GAGCT	CCA	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAACTTTCGCGACATATGAGCTCCATATGGACGTC	AKTFATYELHMDV	241	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	24	3	0	88.9
FR2-IMGT	55	105	51	47	4	0	92.2
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	98	16	0	86
CDR3-IMGT (germline)	241	244	4	4	0	0	100
Total	N/A	N/A	244	216	28	0	88.5


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  H  N  W  W  T  W  V  R  Q  P  P  G  K  G  L 
                    Query_13744  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCGTCAGCAGTCATAACTGGTGGACTTGGGTCCGCCAGCCCCCAGGTAAGGGCCTG  90
V  88.5% (216/244)  IGHV4-4*02   49   ..................G.................A........AG...........G.....................G.....G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  N  G  N  T  N  Y  N  P  S  L  Q  S  R  V  T  M  S  M  A  K  L  K 
                    Query_13744  91   GAGTGGATTGGAGAAATCTATCATAACGGCAACACCAACTACAACCCGTCCCTCCAGAGTCGGGTCACCATGTCAATGGCCAAGTTGAAG  180
V  88.5% (216/244)  IGHV4-4*02   139  ...........G.............GT..G.G......................A.......A........A...G.A.A.....CC...  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------------CDR3-IMGT------
                                       N  Q  F  F  L  K  L  N  D  A  T  A  A  D  T  A  V  Y  Y  C  A  K  T  F  A  T  Y  E  L  H 
                    Query_13744  181  AATCAGTTCTTCCTGAAACTGAACGATGCGACCGCCGCGGACACGGCCGTCTATTACTGTGCGAAAACTTTCGCGACATATGAGCTCCAT  270
V  88.5% (216/244)  IGHV4-4*02   229  ..C.......C......G....G.TC..T.....................G.............--------------------------  292
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (5/5)     IGHD1-26*01  11   ---------------------------------------------------------------------------------.....----  15
J  97.7% (42/43)    IGHJ6*02     20   -----------------------------------------------------------------------------------------.  20

                                      -------->                                 
                                       M  D  V  W  G  Q  G  T  T  V  S  V  S  S 
                    Query_13744  271  ATGGACGTCTGGGGCCAAGGGACCACGGTCAGCGTCTCCTCA  312
J  97.7% (42/43)    IGHJ6*02     21   ...............................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_218104

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-16*01                                                                                           10.3    115  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGAAAGA	GGGGG	CTCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGAAAGAGGGGGCTCCTGACTAC	ARDQKEGAPDY	240	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  P  S  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_13745  4    CCCTGAGACCCTCCTGTACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  95.9% (234/244)  IGHV4-59*01  50   .....TCC.T.A....C.........................G...............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  F  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_13745  94   GGATTGGGTATATCTTTTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  95.9% (234/244)  IGHV4-59*01  140  ...............A..........................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-----------CDR3-IMGT-----------> 
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  K  E  G  A  P  D  Y  
                    Query_13745  184  AATTCTCCCTGAAACTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCAGAAAGAGGGGGCTCCTGACTACT  273
V  95.9% (234/244)  IGHV4-59*01  230  .G...........G..................................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (5/5)     IGHD3-16*01  18   -------------------------------------------------------------------------.....------------  22
J  100.0% (41/41)   IGHJ4*02     8    ----------------------------------------------------------------------------------........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13745  274  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_184129

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           262     4e-72
IGHD2-15*01                                                                                           10.3    119  
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	ACATAATCCT	GCTGC	CAGAGGGGC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGACATAATCCTGCTGCCAGAGGGGCCAACTGGTTCGACCTC	ARGHNPAARGANWFDL	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	48	24	19	2	3	79.2
FR2-IMGT	49	99	51	45	6	0	88.2
CDR2-IMGT	100	120	21	18	3	0	85.7
FR3-IMGT	121	234	114	95	19	0	83.3
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	245	208	34	3	84.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  D  F  Y  G  G  S  F     D  S  Y  W  N  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_13746  1    ACCCTGTCCCTCACCTGCGATTTTTATGGTGGGTCCTT---TGATTCCTACTGGAATTGGATCCGCCAGACTCCAGGGAAGGGGCTGGAG  87
V  84.9% (208/245)  IGHV4-34*01  49   ...................C.G.C..............CAG..G..A........GC............C.C..................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  E  I  N  R  A  G  S  T  N  F  N  P  S  L  E  S  R  L  T  I  S  V  D  T  S  T  K 
                    Query_13746  88   TGGATTGCAGAAATCAATCGTGCTGGAAGCACCAACTTCAATCCGTCCCTCGAGAGTCGACTCACCATTTCAGTGGACACGTCCACGAAG  177
V  84.9% (208/245)  IGHV4-34*01  139  .......GG..........A.AG..............A...C.........A........G.......A.....A..........A...C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       R  F  S  L  R  L  N  S  L  N  A  A  D  T  G  V  Y  Y  C  A  R  G  H  N  P  A  A  R  G  A 
                    Query_13746  178  CGATTCTCCCTGAGGCTAAATTCTCTTAACGCCGCAGACACGGGTGTGTATTACTGTGCGCGAGGACATAATCCTGCTGCCAGAGGGGCC  267
V  84.9% (208/245)  IGHV4-34*01  229  .AG..........A...G.GC...G.G.C......G.......C................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (5/5)     IGHD2-15*01  21   ---------------------------------------------------------------------------.....----------  25
J  96.0% (48/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  D  L  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_13746  268  AACTGGTTCGACCTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  316
J  96.0% (48/50)    IGHJ5*02     3    .............C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_218106

Length=385
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            363     2e-102
IGHD6-19*01                                                                                           18.0    0.66  
IGHJ4*01                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-19*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGGG	AGCAGTGGC	CGCTTCATCA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGGGAGCAGTGGCCGCTTCATCATTGACTAC	ARGGSSGRFIIDY	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	73	2	0	97.3
CDR1-IMGT	78	101	24	21	3	0	87.5
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	19	5	0	79.2
FR3-IMGT	177	290	114	94	20	0	82.5
CDR3-IMGT (germline)	291	298	8	8	0	0	100
Total	N/A	N/A	296	264	32	0	89.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  Q  A  S  G  Y  T  F  S 
                    Query_13747  3    CAGGTGCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGTCAGGCTTCTGGATACACCTTCAGC  92
V  89.2% (264/296)  IGHV1-8*01   1    .................................................................CA.....................C.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  E  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  I  N  P  K  G  G  H  T  G  Y 
                    Query_13747  93   AATTATGAAATCAATTGGGTGCGACAAGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATAAACCCTAAAGGTGGTCACACTGGCTAT  182
V  89.2% (264/296)  IGHV1-8*01   91   .G......T.....C...........G...................................G........CA.....A....A......  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  S  T  I  G  S  N  G  T  A  Y  M  E  L  N  R  L  R  S  E  D 
                    Query_13747  183  GCACAGAAATTCCAGGGCAGAGTCACCATGAGCACTATTGGTTCAAACGGCACAGCCTACATGGAACTCAACAGGTTGCGATCTGAGGAC  272
V  89.2% (264/296)  IGHV1-8*01   181  ........G......................C..GG.ACACC..C.TAA................G..G.G...CC..A...........  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  Y  C  A  R  G  G  S  S  G  R  F  I  I  D  Y  W  G  H  G  S  L  V  T  V  S  S 
                    Query_13747  273  ACGGCCGTCTATTACTGTGCGAGAGGCGGGAGCAGTGGCCGCTTCATCATTGACTACTGGGGCCACGGAAGCCTGGTCACCGTCTCCTCA  362
V  89.2% (264/296)  IGHV1-8*01   271  ........G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R  G                                                                
D  100.0% (9/9)     IGHD6-19*01  7    ------------------------------.........---------------------------------------------------  15
J  95.1% (39/41)    IGHJ4*01     7    -------------------------------------------------................A....C...................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37801578


Query= Query_218101

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         343     2e-96
IGHD5-12*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGGGGAGGAT	TGGCTACGA	GACCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGGGGAGGATTGGCTACGAGACCCCCTTTGACCTC	ARAGRIGYETPFDL	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	51	0	0	100
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	104	10	0	91.2
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	233	14	0	94.3


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  T  V  S  G  Y  P  I  S  S  G  H  Y  W  G  W  I  R  Q  P  P  G  K  G  L 
                    Query_13748    1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTTACCCCATCAGCAGTGGTCACTACTGGGGCTGGATCCGGCAGCCCCCAGGGAAGGGGCTG  90
V  94.3% (233/247)  IGHV4-38-2*02  49   .................................T..............T.........................................  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  R  S  G  S  T  Y  Y  H  P  S  L  K  R  R  V  T  I  T  V  D  M  S  K 
                    Query_13748    91   GAGTGGATTGGGAGTATCTATCGTAGTGGGAGTACCTACTACCACCCGTCCCTCAAGCGTCGAGTCACCATAACAGTAGACATGTCCAAG  180
V  94.3% (233/247)  IGHV4-38-2*02  139  ......................A.........C.........A..............A..............T.........C.......  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                         N  Q  F  S  L  N  L  N  S  V  T  D  A  D  T  A  V  Y  Y  C  A  R  A  G  R  I  G  Y  E  T 
                    Query_13748    181  AACCAGTTCTCGTTGAATCTGAACTCTGTGACCGACGCAGACACGGCCGTCTATTACTGTGCGAGAGCGGGGAGGATTGGCTACGAGACC  270
V  94.3% (233/247)  IGHV4-38-2*02  229  ...........CC....G....G...........C...............G................-----------------------  295
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD5-12*01    11   -----------------------------------------------------------------------------.........----  19

                                        ----------->                                  
                                         P  F  D  L  W  G  Q  G  T  L  V  T  A  S  S  
                    Query_13748    271  CCCTTTGACCTCTGGGGCCAGGGAACCCTGGTCACCGCCTCCTCAG  316
J  93.2% (41/44)    IGHJ4*02       5    --.......TA..........................T........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_218100

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           304     9e-85
IGHD6-25*01                                                                                           12.2    30   
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTG	GCGGCT	GCCTTAC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTGGCGGCTGCCTTACGGACGTC	TRGGGCLTDV	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	100	14	0	87.7
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	219	25	0	89.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  F  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13749  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTGGTTTCTTCTGGAGCTGGATTCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  89.8% (219/244)  IGHV4-59*01  49   .............................T............A...A..A............C...........................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  H  Y  S  G  H  T  N  Y  N  P  S  L  R  S  R  V  I  I  S  L  D  T  S  N  N 
                    Query_13749  91   TGGATTGGGAATATCCACTACAGTGGGCACACCAACTACAACCCCTCCCTCAGGAGTCGAGTCATCATATCGCTGGACACGTCCAACAAC  180
V  89.8% (219/244)  IGHV4-59*01  139  .........T.....T.T.........AG.......................A...........C......AG.A...........G...  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  I  S  L  K  V  N  S  G  T  A  A  D  T  A  L  Y  Y  C  T  R  G  G  G  C  L  T  D  V  W 
                    Query_13749  181  CAGATCTCCCTGAAGGTGAACTCCGGGACCGCTGCGGACACGGCCCTCTATTATTGTACGAGAGGTGGCGGCTGCCTTACGGACGTCTGG  270
V  89.8% (219/244)  IGHV4-59*01  229  ...T...........C...G...T.T...................G.G.....C...G......--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (6/6)     IGHD6-25*01  11   -------------------------------------------------------------------......-----------------  16
J  95.0% (38/40)    IGHJ6*02     23   --------------------------------------------------------------------------------..........  32

                                                                    
                                       G  H  G  P  T  V  T  V  S  S 
                    Query_13749  271  GGCCACGGGCCCACGGTCACCGTCTCCTCA  300
J  95.0% (38/40)    IGHJ6*02     33   .....A...A....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_218103

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           419     2e-119
IGHD3-16*01                                                                                           12.2    36    
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	C	GGGGGA	AATTGGTAACACCTAATTGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTC	ARRGKLVTPNWDYGMDV	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	278	10	0	96.5


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  N  Y 
                    Query_13750  2    CAGCTGGTGCAGTCTGGAGTTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTACCAACTAC  91
V  96.5% (278/288)  IGHV1-18*04  7    ...................C.................................................................G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  C  Y  N  G  N  T  K  Y  A  L 
                    Query_13750  92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGTTGTTACAATGGTAACACAAAGTATGCACTG  181
V  96.5% (278/288)  IGHV1-18*04  97   ...........................................................CGC..................C.......A.  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  H  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_13750  182  AAGCACCAGGGCAGAGTCACCATGACCACAGACACATCGACGAGCACAGCCTATATGGAGCTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  96.5% (278/288)  IGHV1-18*04  187  ....T.................................C..............C....................................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><--------------------CDR3-IMGT-------------------->                           
                                       V  Y  Y  C  A  R  R  G  K  L  V  T  P  N  W  D  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_13750  272  GTGTATTACTGTGCGAGACGGGGGAAATTGGTAACACCTAATTGGGACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  361
V  96.5% (278/288)  IGHV1-18*04  277  ..................------------------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (6/6)     IGHD3-16*01  18   -------------------......-----------------------------------------------------------------  23
J  100.0% (50/50)   IGHJ6*02     13   ----------------------------------------------............................................  56

                                            
                                       S  S 
                    Query_13750  362  TCCTCA  367
J  100.0% (50/50)   IGHJ6*02     57   ......  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_218102

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*01                                                                                           361     5e-102
IGHD4-17*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*01	IGHD4-17*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACAGA	GGTCATC	GACTACGGTGACTAC	GTCG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCACAGAGGTCATCGACTACGGTGACTACGTCGACTTCTACTATTACGGAATGGACGTC	PQRSSTTVTTSTSTITEWTS	289	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	69	70	62	7	1	88.6
CDR1-IMGT	70	93	24	19	5	0	79.2
FR2-IMGT	94	144	51	48	3	0	94.1
CDR2-IMGT	145	174	30	25	5	0	83.3
FR3-IMGT	175	288	114	105	9	0	92.1
CDR3-IMGT (germline)	289	296	8	7	1	0	87.5
Total	N/A	N/A	297	266	30	1	89.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L   C  S  L  E  E  A  W  L  S  L  E  S  P  S  E  S  P  V  Q  P  L  D  S  A  S  K  T  
                    Query_13751  1    GCAGCTG-TGCAGTCTGGAGGAGGCTTGGTTAAGCCTGGAGAGTCCCTCAGAGTCTCCTGTGCAGCCTCTGGACTCAGCTTCAAAAACGC  89
V  89.6% (266/297)  IGHV3-15*01  6    .......G..G.......G...........A........G.G......T...C....................T...CT....GT.....  95
                                        Q  L  V  E  S  G  G  G  L  V  K  P  G  G  S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A

                                      ---><--------------------FR2-IMGT---------------------><----------CDR2-IMGT---------><----
                                      P  G  *  P  G  S  A  S  L  Q  G  R  G  W  S  G  L  A  A  L  E  A  E  P  M  V  G  R  Q  T  
                    Query_13751  90   CTGGATGACCTGGGTCCGCCAGTCTCCAGGGAAGGGGCTGGAGTGGGTTGGCCGCATTAGAAGCAGAACCGATGGTGGGACGGCAGACTA  179
V  89.6% (266/297)  IGHV3-15*01  96   ........G.............G...............................T....A.....A...T...........AA.......  185
                                        W  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y

                                      ------------------------------------------------FR3-IMGT----------------------------------
                                      T  L  H  P  *  K  A  D  S  S  S  Q  E  M  N  R  R  P  P  F  I  F  K  *  T  A  *  K  P  R  
                    Query_13751  180  CGCTGCACCCGTGAAAGGCAGATTCATCATCTCAAGAGATGAATCGAAGACCACCCTTTATCTTCAAATGAACAGCCTGAAAACCGAGGA  269
V  89.6% (266/297)  IGHV3-15*01  186  ..........................C...............T..A..A.A...G..G.....G..........................  275
                                        A  A  P  V  K  G  R  F  T  I  S  R  D  D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D

                                      ------------------><-------------------------CDR3-IMGT------------------------>           
                                      T  Q  P  S  I  T  V  P  Q  R  S  S  T  T  V  T  T  S  T  S  T  I  T  E  W  T  S  G  A  K  
                    Query_13751  270  CACAGCCGTCTATTACTGTGCCACAGAGGTCATCGACTACGGTGACTACGTCGACTTCTACTATTACGGAATGGACGTCTGGGGCCAAGG  359
V  89.6% (266/297)  IGHV3-15*01  276  .........G.........A.......---------------------------------------------------------------  302
                                        T  A  V  Y  Y  C  T  T                                                                  
D  100.0% (15/15)   IGHD4-17*01  2    ----------------------------------...............-----------------------------------------  16
J  89.8% (53/59)    IGHJ6*02     4    -----------------------------------------------------...A......C.....T....................  40

                                                            
                                      G  V  R  S  P  S  P   
                    Query_13751  360  GAGTTCGGTCACCGTCTCCTCA  381
J  89.8% (53/59)    IGHJ6*02     41   ..CCA.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_184122

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           277     9e-77
IGHD3-3*01                                                                                            21.8    0.041
IGHJ5*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-3*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCGATGGGGAAGAG	ACGATTTTTGG	GATGGGGTGA	GGTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCGATGGGGAAGAGACGATTTTTGGGATGGGGTGAGGTTCGACTCT	ARARWGRDDFWDGVRFDS	235	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	11	21	11	11	0	0	100
CDR1-IMGT	22	45	24	17	7	0	70.8
FR2-IMGT	46	96	51	47	4	0	92.2
CDR2-IMGT	97	120	24	20	4	0	83.3
FR3-IMGT	121	234	114	102	12	0	89.5
CDR3-IMGT (germline)	235	241	7	7	0	0	100
Total	N/A	N/A	231	204	27	0	88.3


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  T  N  Y  A  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  I  S  Y  I  
                    Query_13752  11   GTGCAGCCTCTGGATTCACCTTTACCAACTATGCCATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTTGAATGGATTTCATACATCA  100
V  88.3% (204/231)  IGHV3-48*03  65   ......................C.GT.GT....AA.....C.............................G..G...G..........T.  154
                                         A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  Y  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  S  S  G  S  T  R  H  Y  A  D  S  L  K  G  R  L  T  I  S  R  D  N  A  N  N  S  V  Y  L  
                    Query_13752  101  GTAGTAGCGGCAGTACCAGACATTACGCAGACTCTTTGAAGGGCCGACTCACCATCTCCAGAGACAACGCCAACAATTCAGTATATCTGC  190
V  88.3% (204/231)  IGHV3-48*03  155  .......T..T.......T.T.C............G...........T.........................G..C...C.G.......  244
                                      S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  S  L  Y  L  

                                      -------------------------------------------><----------------------CDR3-IMGT--------------
                                      Q  M  N  S  L  R  V  A  D  T  A  V  Y  H  C  A  R  A  R  W  G  R  D  D  F  W  D  G  V  R  
                    Query_13752  191  AGATGAACAGCCTGAGAGTCGCGGACACGGCTGTTTATCACTGTGCGAGAGCCCGATGGGGAAGAGACGATTTTTGGGATGGGGTGAGGT  280
V  88.3% (204/231)  IGHV3-48*03  245  .A................C..A................T............---------------------------------------  295
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                         
D  100.0% (11/11)   IGHD3-3*01   6    ------------------------------------------------------------------...........-------------  16
J  93.3% (42/45)    IGHJ5*01     7    ---------------------------------------------------------------------------------------...  9

                                      ------->                                  
                                      F  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_13752  281  TCGACTCTTGGGGCCAGGGAATCCTGGTCACCGTCTCCTCAG  322
J  93.3% (42/45)    IGHJ5*01     10   .......C........A....C....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_184121

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*11                                                                                           366     2e-103
IGHD3-10*01                                                                                           12.2    36    
IGHJ3*01                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*11	IGHD3-10*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CCCCGCGAGACACTCAC	TTCGGG	CGG	GCTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACCCCGCGAGACACTCACTTCGGGCGGGCTTTTGATGTC	ATPRDTHFGRAFDV	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	65	4	0	94.2
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	20	4	0	83.3
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	286	260	26	0	90.9


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  T  S  G  S  S  V  K  V  S  C  K  T  S  G  G  P  F  S  N  Y 
                    Query_13753  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGACGTCTGGGTCCTCGGTGAAGGTCTCCTGCAAGACTTCTGGAGGCCCCTTCAGTAACTAT  91
V  90.9% (260/286)  IGHV1-69*11  7    .................G.............A.C.............................G...........A.......C.G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       A  L  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  F  I  P  T  L  G  T  T  D  Y  A  Q 
                    Query_13753  92   GCTCTCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGCTGGGATGGTTCATCCCTACCCTTGGGACAACAGACTACGCACAG  181
V  90.9% (260/286)  IGHV1-69*11  97   ...A...............................G.........A.....A..A.........T......T...G..A...........  186
                                       A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  R  I  I  P  I  L  G  T  A  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       T  F  Q  G  R  V  T  F  T  A  D  E  S  T  G  T  V  Y  M  E  V  S  G  L  T  S  E  D  T  A 
                    Query_13753  182  ACGTTCCAGGGCAGAGTCACTTTTACCGCGGACGAATCCACGGGCACAGTCTACATGGAGGTGAGCGGCCTGACATCTGAAGACACGGCC  271
V  90.9% (260/286)  IGHV1-69*11  187  .A..................GA....................A......C..........C.....A......G......G.........  276
                                       K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  T  P  R  D  T  H  F  G  R  A  F  D  V  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13753  272  GTCTATTACTGTGCGACCCCGCGAGACACTCACTTCGGGCGGGCTTTTGATGTCTGGGGCCAGGGGACACTGGTCACCGTCTCTTCAG  359
V  90.9% (260/286)  IGHV1-69*11  277  ..G.............------------------------------------------------------------------------  292
                                       V  Y  Y  C  A                                                                          
D  100.0% (6/6)     IGHD3-10*01  13   ---------------------------------......-------------------------------------------------  18
J  95.7% (44/46)    IGHJ3*01     5    ------------------------------------------....................A......A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_229984

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           350     8e-99
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCT	GTGGCTGG	AAAAGCAGTCCG	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCTGTGGCTGGAAAAGCAGTCCGTGATGCTTTTGATATC	ARSVAGKAVRDAFDI	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13754  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.2% (236/248)  IGHV3-30*04  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  H  K  Y  Y  A  D  S  V  K  G  R  L  T  V  S  R  D  N  S  
                    Query_13754  91   AGTGGGTGGCAGTTATATCATATGATGGAAGTCATAAATACTATGCAGACTCCGTGAAGGGCCGACTCACCGTCTCCAGAGACAATTCCG  180
V  95.2% (236/248)  IGHV3-30*04  137  ................................A..........C.....................T.....A.................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      E  N  T  L  Y  V  Q  V  N  S  L  R  P  E  D  T  A  M  Y  Y  C  A  R  S  V  A  G  K  A  V  
                    Query_13754  181  AGAACACGCTCTATGTGCAAGTGAACAGCCTGAGACCTGAGGACACGGCTATGTATTACTGTGCGAGATCTGTGGCTGGAAAAGCAGTCC  270
V  95.2% (236/248)  IGHV3-30*04  227  ..........G...C.....A..............G..............G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  11   -----------------------------------------------------------------------........-----------  18

                                      ---------------->                                
                                      R  D  A  F  D  I  W  G  R  G  T  V  V  I  V  S  S
                    Query_13754  271  GTGATGCTTTTGATATCTGGGGCCGAGGGACAGTGGTCATCGTGTCTTC  319
J  91.7% (44/48)    IGHJ3*02     1    -.......................A.......A......C...C.....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_218109

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           439     2e-125
IGHD6-6*01                                                                                            31.5    6e-05 
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	G	GTATAGCAGCTCGTCC	TTGGTC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTATAGCAGCTCGTCCTTGGTCTGACTAC	ARGIAARPWSDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	285	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  F
                    Query_13755  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAGCTT  90
V  98.6% (285/289)  IGHV5-51*03  6    .........................................................................................A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  L  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_13755  91   CTGGCTCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.6% (285/289)  IGHV5-51*03  96   ....A.....................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  G  T  A
                    Query_13755  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGGCACCGC  270
V  98.6% (285/289)  IGHV5-51*03  186  ...................................................................................A......  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        M  Y  F  C  A  R  G  I  A  A  R  P  W  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13755  271  CATGTATTTCTGTGCGAGAGGTATAGCAGCTCGTCCTTGGTCTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  98.6% (285/289)  IGHV5-51*03  276  ........A..........----------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                 
D  100.0% (16/16)   IGHD6-6*01   3    --------------------................-----------------------------------------------  18
J  100.0% (41/41)   IGHJ4*02     8    ------------------------------------------.........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_218108

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           400     9e-114
IGHD2-15*01                                                                                           10.3    134   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CGAGAAG	GGTGG	CGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGACACGAGAAGGGTGGCGGGGCGAACGACTAC	VRHEKGGGANDY	289	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	72	3	0	96
CDR1-IMGT	76	99	24	19	5	0	79.2
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	107	7	0	93.9
CDR3-IMGT (germline)	289	296	8	6	2	0	75
Total	N/A	N/A	296	276	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P 
                    Query_13756  1    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCC  90
V  93.2% (276/296)  IGHV5-51*01  1    .....G........G..........................C........................................GC...A..  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  A  D  S  D  T  R  Y 
                    Query_13756  91   AATTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAACATCTATCCTGCTGACTCTGACACCAGATAC  180
V  93.2% (276/296)  IGHV5-51*01  91   .GC.......................................................T...........G.........T.........  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       S  L  T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 
                    Query_13756  181  AGTCTGACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGAC  270
V  93.2% (276/296)  IGHV5-51*01  181  ..C.C.T.....C.............................................................C...............  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-------------CDR3-IMGT------------>                                
                                       T  A  V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13756  271  ACCGCCGTGTATTATTGTGTCAGACACGAGAAGGGTGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  356
V  93.2% (276/296)  IGHV5-51*01  271  ......A.......C....CG.....------------------------------------------------------------  296
                                       T  A  M  Y  Y  C  A  R                                                               
D  100.0% (5/5)     IGHD2-15*01  14   ---------------------------------.....------------------------------------------------  18
J  97.4% (37/38)    IGHJ4*02     9    ------------------------------------------------....................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_184125

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         339     2e-95
IGHD5-18*01                                                                                           19.9    0.16 
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGGCGGTA	GATACACCTATGG	GATTTATGTACTTCC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGCGGTAGATACACCTATGGGATTTATGTACTTCCTTGATTAC	ARGAVDTPMGFMYFLDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  E  A  S  G  F  S  F  S  T  Y  S  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13757    1    GGTCCCTGAGACTCTCCTGTGAAGCCTCTGGATTCAGTTTCAGTACTTATTCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-30-3*01  47   .....................C..............CC.......GC...G.......................................  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  A  Y  D  G  S  N  K  Y  Y  G  D  S  V  K  G  R  F  S  I  S  R  D  N  S  
                    Query_13757    91   AGTGGGTGGCAGTTATAGCATATGATGGAAGCAATAAATATTATGGAGACTCCGTAAAGGGCCGATTCTCCATCTCCAGAGACAATTCCA  180
V  93.6% (233/249)  IGHV3-30-3*01  137  .................T......................C..C.C.........G............A.....................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                        K  N  T  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  A  V  D  T  P  M  
                    Query_13757    181  AGAACACATTGTTTCTGCAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTCTATTACTGTGCGAGAGGGGCGGTAGATACACCTATGG  270
V  93.6% (233/249)  IGHV3-30-3*01  227  .......GC...A.......................................G................---------------------  295
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  92.3% (12/13)    IGHD5-18*01    4    -----------------------------------------------------------------------------......G......  16

                                        GT-------------------->                                  
                                        G  F  M  Y  F  L  D  Y  W  G  Q  G  T  L  A  T  V  S  A  
                    Query_13757    271  GATTTATGTACTTCCTTGATTACTGGGGCCAGGGAACCCTGGCCACCGTCTCCGCAG  327
J  92.9% (39/42)    IGHJ4*02       7    ---------------....C......................T..........T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_210350

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            336     1e-94
IGHD4-17*01                                                                                           14.1    8.2  
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGGCCGAAG	TACGGTG	TCTT	CGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGGCCGAAGTACGGTGTCTTCGGTTTGGACGTC	AGPKYGVFGLDV	241	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	25	2	0	92.6
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	243	3	3	0	0	100
Total	N/A	N/A	243	229	14	0	94.2


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  D  V  S  G  G  S  I  S  R  S  N  W  W  S  W  V  R  Q  T  P  G  K  G  L 
                    Query_13758  1    ACCCTGTCCCTCACCTGCGATGTCTCTGGTGGCTCCATCAGCAGAAGCAACTGGTGGAGTTGGGTCCGCCAGACCCCAGGGAAGGGGCTG  90
V  94.2% (229/243)  IGHV4-4*02   49   ...................C........................T..T........................C.................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  L  S  G  S  T  S  Y  N  P  S  L  E  S  R  V  T  M  S  V  D  R  S  E 
                    Query_13758  91   GAGTGGATTGGGGAAATCTCTCTTAGTGGGAGCACCAGCTACAACCCGTCCCTCGAGAGTCGAGTCACCATGTCAGTAGACAGGTCCGAG  180
V  94.2% (229/243)  IGHV4-4*02   139  ...................A..A..............A................A................A..........A....A..  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-------------CDR3-IMGT-------
                                       N  Q  F  S  L  I  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  P  K  Y  G  V  F  G  L 
                    Query_13758  181  AACCAGTTCTCCCTGATACTGACCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGGGGCCGAAGTACGGTGTCTTCGGTTTG  270
V  94.2% (229/243)  IGHV4-4*02   229  ................AG....G........................................---------------------------  291
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD4-17*01  5    ------------------------------------------------------------------------.......-----------  11
J  97.8% (45/46)    IGHJ6*02     17   -----------------------------------------------------------------------------------....A..  23

                                      ----->                                 
                                       D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13758  271  GACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  309
J  97.8% (45/46)    IGHJ6*02     24   .......................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_210351

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         339     2e-95
IGHD6-13*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGTGGGGTGCGTTATGC	CAGCAGCTGGTAC	GG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTGGGGTGCGTTATGCCAGCAGCTGGTACGGCTAC	ARGGVRYASSWYGY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	56	27	27	0	0	100
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  R  L  S  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  L  
                    Query_13759    4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTTACTCCATCAGCAGTGGTTACTACTGGGGCTGGCTCCGGCAGCCCCCAGGGAAGGGGCTGG  93
V  94.3% (231/245)  IGHV4-38-2*01  50   .....TCC...A..................................................A...........................  139
                                           L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  G  T  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  
                    Query_13759    94   AGTGGATTGGGACTATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACTATGTCAGTAGACACGTCCAAGA  183
V  94.3% (231/245)  IGHV4-38-2*01  140  ............G.................G....................................C..A...................  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                        N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  G  G  V  R  Y  A  S  S  
                    Query_13759    184  ACCACTTCTCCCTAAAGCTGAGCTCTGTGACGGCCGCTGACACGGCCGTGTTTTACTGTGCGAGAGGTGGGGTGCGTTATGCCAGCAGCT  273
V  94.3% (231/245)  IGHV4-38-2*01  230  ....G........G.................C.....A.............A.............-------------------------  294
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (13/13)   IGHD6-13*01    9    ----------------------------------------------------------------------------------........  16

                                        ---------->                                
                                        W  Y  G  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13759    274  GGTACGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  316
D  100.0% (13/13)   IGHD6-13*01    17   .....--------------------------------------  21
J  100.0% (36/36)   IGHJ4*02       11   -------....................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_1479

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           336     1e-94
IGHD1-1*01                                                                                            10.3    123  
IGHJ3*01                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD1-1*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	ATGGGAAACGTAGGGATGCC	TACAA	TCGTC	GATGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAATGGGAAACGTAGGGATGCCTACAATCGTCGATGTTTTTGATGTC	ARMGNVGMPTIVDVFDV	244	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	232	17	0	93.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_13760  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCATCAGGAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  93.2% (232/249)  IGHV4-31*03  49   ...................C.....................C................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Q  I  Y  H  T  G  S  S  D  H  S  P  S  L  K  S  R  L  T  I  A  V  D  T  S 
                    Query_13760  91   CTGGAGTGGATCGGGCAAATCTATCACACTGGGAGCAGCGACCACAGCCCGTCCCTCAAGAGTCGACTTACCATAGCTGTAGACACGTCT  180
V  93.2% (232/249)  IGHV4-31*03  139  ...........T...T.C......T...G........C.T..T...A...................G........T.A............  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------------CDR3-I
                                       K  N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  M  G  N  V  G  M  P 
                    Query_13760  181  AAGAACCAGTTCTCCCTGAACCTGAGTTCTGTGACGGCCGCGGACACGGCCGTGTATTACTGTGCGAGAATGGGAAACGTAGGGATGCCT  270
V  93.2% (232/249)  IGHV4-31*03  229  ....................G.....C........T.................................---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (5/5)     IGHD1-1*01   3    -----------------------------------------------------------------------------------------.  3

                                      MGT-------------------->                                  
                                       T  I  V  D  V  F  D  V  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13760  271  ACAATCGTCGATGTTTTTGATGTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  328
D  100.0% (5/5)     IGHD1-1*01   4    ....------------------------------------------------------  7
J  98.0% (48/49)    IGHJ3*01     2    ---------....C............................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_1478

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            403     1e-114
IGHD3-10*01                                                                                           14.1    8.8   
IGHJ4*02                                                                                              66.1    5e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	TCGGGGA	CTCCTG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATCGGGGACTCCTGTTTGACTTC	ARDRGLLFDF	273	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	80	30	28	2	0	93.3
FR2-IMGT	81	131	51	51	0	0	100
CDR2-IMGT	132	158	27	26	1	0	96.3
FR3-IMGT	159	272	114	107	7	0	93.9
CDR3-IMGT (germline)	273	280	8	8	0	0	100
Total	N/A	N/A	280	269	11	0	96.1


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  G  I  S  G  D  S  V  S  S  D  T  A  A  W  N  W  
                    Query_13761  1    CAGGACTGGTGAAGCCCTCGCAGACCCTCTCACTCACCTGTGGCATCTCCGGGGACAGTGTCTCTAGCGACACTGCTGCTTGGAACTGGA  90
V  96.1% (269/280)  IGHV6-1*01   26   ..........................................C.........................A...G.................  115
                                         G  L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  

                                      -----------FR2-IMGT---------------------><--------CDR2-IMGT--------><---------------------
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  K  S  K  W  Y  N  D  Y  A  V  S  V  K  
                    Query_13761  91   TCAGGCAGTCCCCATCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACAAGTCCAAGTGGTATAATGATTATGCAGTATCTGTGAAGG  180
V  96.1% (269/280)  IGHV6-1*01   116  ...................................................G....................................AA  205
                                      I  R  Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  

                                      -------------------------------FR3-IMGT---------------------------------------------------
                                      G  R  I  T  I  N  S  D  T  S  K  N  Q  F  S  L  H  L  N  S  M  T  P  E  D  T  A  V  Y  Y  
                    Query_13761  181  GTCGAATAACCATCAACTCAGACACATCCAAGAACCAGTTCTCCCTGCACCTGAACTCTATGACTCCCGAGGACACGGCTGTATACTACT  270
V  96.1% (269/280)  IGHV6-1*01   206  .................C...............................G.........G......................G..T....  295
                                      S  R  I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  

                                      -><----------CDR3-IMGT--------->                                  
                                      C  A  R  D  R  G  L  L  F  D  F  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_13761  271  GTGCAAGAGATCGGGGACTCCTGTTTGACTTCTGGGGCCAGGGAATCCTGGTCACCGTCTCGTCAG  336
V  96.1% (269/280)  IGHV6-1*01   296  ..........--------------------------------------------------------  305
                                      C  A  R                                                           
D  100.0% (7/7)     IGHD3-10*01  14   ----------.......-------------------------------------------------  20
J  93.0% (40/43)    IGHJ4*02     6    -----------------------.......A..............C...............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_210354

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           296     2e-82
IGHD3-10*01                                                                                           35.3    4e-06
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGAAC	TATTACTATGGTTCGGGG	GCCC	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGAACTATTACTATGGTTCGGGGGCCCACTTTGACTAC	ARGNYYYGSGAHFDY	246	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	24	6	0	80
FR2-IMGT	60	110	51	40	11	0	78.4
CDR2-IMGT	111	131	21	20	1	0	95.2
FR3-IMGT	132	245	114	108	6	0	94.7
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	219	30	0	88


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  K  S  G  G  L  Y  L  R  W  V  R  P  H  P  G  E  G  
                    Query_13762  4    CCCTGAGACTCTCCTGTACTGTTTCTGGTGGCTCCATTAAGAGTGGCGGTTTATACTTGAGGTGGGTTCGCCCGCACCCCGGGGAGGGGC  93
V  88.0% (219/249)  IGHV4-31*01  50   .....TCC...A....C.....C..............C.GC.....T....AC....G...C...A.C....A......A...A....C.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      P  G  W  I  G  F  I  Y  Y  S  G  S  P  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  
                    Query_13762  94   CGGGGTGGATTGGGTTCATCTATTACAGTGGGAGCCCCTACTACAACCCCTCCCTCAAGAGTCTAGTTACCATATCAGTAGACACCTCTA  183
V  88.0% (219/249)  IGHV4-31*01  140  T..A...........A...................A.............G...................................G....  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  R  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  N  Y  Y  Y  G  S  
                    Query_13762  184  AGAACCGGTTCTCCCTGAAGTTGACTTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGGAACTATTACTATGGTTCGG  273
V  88.0% (219/249)  IGHV4-31*01  230  ......A.............C...GC...........................................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (18/18)   IGHD3-10*01  2    --------------------------------------------------------------------------................  17

                                      ---------------->                                  
                                      G  A  H  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13762  274  GGGCCCACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (18/18)   IGHD3-10*01  18   ..-------------------------------------------------  19
J  100.0% (45/45)   IGHJ4*02     4    ------.............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_210355

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           310     1e-86
IGHD6-19*01                                                                                           18.0    0.58 
IGHJ4*02                                                                                              54.5    1e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGCTCCCCCCTCAC	TATATCAATGGCTGG	GACT	TTTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGCTCCCCCCTCACTATATCAATGGCTGGGACTTTTGGCTTC	ACSPLTISMAGTFGF	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	219	21	0	91.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  Y  Y  W  N  W  I  R  Q  T  P  G  K  E  L  E 
                    Query_13763  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATAAGTAGTTATTACTGGAACTGGATCCGGCAGACCCCAGGGAAGGAACTGGAG  90
V  91.2% (219/240)  IGHV4-59*08  49   ...............................G......C........C.......G.............C............G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  V  Y  Y  T  G  S  A  N  Y  N  P  S  L  K  S  R  V  S  M  S  G  D  S  S  K  N 
                    Query_13763  91   TGGATTGGGTATGTCTATTACACTGGGAGCGCCAACTACAACCCCTCCCTCAAGAGTCGAGTCAGCATGTCGGGGGACTCGTCCAAGAAT  180
V  91.2% (219/240)  IGHV4-59*08  139  ............A.........G.......A.................................C...A..A.TA...A..........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  S  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  C  S  P  L  T  I  S  M  A  G 
                    Query_13763  181  CAGTTCTCCCTGAGTCTGAGTTCTGTGACCGCCGCAGACACGGCCATCTATTACTGTGCGTGCTCCCCCCTCACTATATCAATGGCTGGG  270
V  91.2% (219/240)  IGHV4-59*08  229  .............AG.....C........................G.G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  86.7% (13/15)    IGHD6-19*01  4    --------------------------------------------------------------------------....G..G.......-  18

                                      ----------->                                  
                                       T  F  G  F  W  G  Q  G  S  L  V  R  V  S  S  
                    Query_13763  271  ACTTTTGGCTTCTGGGGCCAGGGATCCCTGGTCCGCGTCTCCTCAG  316
J  88.4% (38/43)    IGHJ4*02     6    ---....A..A.............A........AC...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_210356

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           304     1e-84
IGHD1-26*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCTAGACCAAGAGTATGAA	TGGGAGGTTCTAC	CACA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCTAGACCAAGAGTATGAATGGGAGGTTCTACCACATGACTCC	ARSLDQEYEWEVLPHDS	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	221	27	0	89.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  V  S  G  F  T  F  R  T  Y  V  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13764  1    GGTCCCTGAGACTCTCCTGTGTAGTGTCTGGATTCACATTCAGAACCTATGTCATGAACTGGGTCCGCCAGGCTCCGGGGAAGGGGCTGG  90
V  89.1% (221/248)  IGHV3-21*01  47   .....................C..CC...........C.....T.G....AG........................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  P  S  G  N  Y  V  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13764  91   AGTGGGTCTCATCCATTAGTCCTAGCGGAAATTATGTACACTATGTGGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  89.1% (221/248)  IGHV3-21*01  137  ....................AG...TA.T.G...CA..T....C.CA...........................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  K  S  L  Y  L  E  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  S  L  D  Q  E  Y  E  
                    Query_13764  181  AGAAGTCACTGTATCTGGAAATGGACAGCCTGAGAGTCGAGGACACGGCTGTTTATTATTGTGCGAGAAGCCTAGACCAAGAGTATGAAT  270
V  89.1% (221/248)  IGHV3-21*01  227  ....C............C.....A............C...............G.....C.........----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.6% (11/13)    IGHD1-26*01  8    -----------------------------------------------------------------------------------------.  8

                                      GT-------------------->                                  
                                      W  E  V  L  P  H  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13764  271  GGGAGGTTCTACCACATGACTCCTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  327
D  84.6% (11/13)    IGHD1-26*01  9    .....C.A....---------------------------------------------  20
J  95.1% (39/41)    IGHJ4*02     8    ----------------.....A.....................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_210357

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           321     7e-90
IGHD4-17*01                                                                                           14.1    8.4  
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGAATAC	AG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGAATACAGCAACTGGGTCGCCCCC	ARDSGEYSNWVAP	250	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	135	27	19	2	6	70.4
FR3-IMGT	136	249	114	105	9	0	92.1
CDR3-IMGT (germline)	250	257	8	8	0	0	100
Total	N/A	N/A	257	233	18	6	90.7


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  V  S  S  G  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_13765  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCGTCAGCAGTGGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGG  90
V  90.7% (233/257)  IGHV4-61*01  49   ...................C...........G.............................G...........................A  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><--------CDR2-IMGT--------><--------------------------------------------
                                       L  E  W  I  G  H  I  Y  N  Y  N  R  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D 
                    Query_13765  91   CTGGAGTGGATCGGTCATATCTATAACTATAACAGAGGGAGCACCAATTATAATCCCTCCCTCCAAAGTCGAGTCACCATATCAGTAGAC  180
V  90.7% (233/257)  IGHV4-61*01  139  ...........T..GT........T..------..T...........C..C..C.........A.G........................  222
                                       L  E  W  I  G  Y  I  Y  Y        S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><--------------CDR3-I
                                       T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  G  E  Y 
                    Query_13765  181  ACATCCAAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATTCCGGTGAATAC  270
V  90.7% (233/257)  IGHV4-61*01  223  ..G........................C...G...........................G.................-------------  299
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  90.0% (9/10)     IGHD4-17*01  7    --------------------------------------------------------------------------------......C...  16

                                      MGT-------------->                                  
                                       S  N  W  V  A  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13765  271  AGCAACTGGGTCGCCCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
J  96.0% (48/50)    IGHJ5*02     2    --.......T...A......................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_1473

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           439     2e-125
IGHD2-8*02                                                                                            14.1    9.6   
IGHJ6*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-8*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTGGT	TACTGGT	ACCAACGCCAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTC	ARLVTGTNATYGLDV	291	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	72	2	0	97.3
CDR1-IMGT	78	101	24	24	0	0	100
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	112	2	0	98.2
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	287	6	0	98


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  
                    Query_13766  4    AGATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCA  93
V  98.0% (287/293)  IGHV5-51*03  2    ..G..................................................................G....................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  R  M  G  I  I  Y  P  G  D  S  D  T  R  Y  
                    Query_13766  94   GCTACTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGAGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACA  183
V  98.0% (287/293)  IGHV5-51*03  92   ............G..................................T..........................................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_13766  184  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGTACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  273
V  98.0% (287/293)  IGHV5-51*03  182  .......................................A.........C........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  M  Y  Y  C  A  R  L  V  T  G  T  N  A  T  Y  G  L  D  V  W  G  Q  G  S  K  V  T  V  
                    Query_13766  274  CCGCCATGTATTACTGTGCGAGACTGGTTACTGGTACCAACGCCACCTACGGTCTGGACGTCTGGGGCCAAGGGAGCAAGGTCACCGTCT  363
V  98.0% (287/293)  IGHV5-51*03  272  .......................-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD2-8*02   10   ----------------------------.......-------------------------------------------------------  16
J  93.9% (46/49)    IGHJ6*02     14   ----------------------------------------------.......A.....................C..C...........  57

                                           
                                      S  S 
                    Query_13766  364  CCTCA  368
J  93.9% (46/49)    IGHJ6*02     58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_1472

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           265     5e-73
IGHD3-10*01                                                                                           27.6    7e-04
IGHJ6*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCGGTCC	CTATGGTTCGGGGA	AGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCGGTCCCTATGGTTCGGGGAAGGACTACGGAATGGACGTC	ARSGPYGSGKDYGMDV	230	277	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	18	6	0	75
FR2-IMGT	41	91	51	48	3	0	94.1
CDR2-IMGT	92	115	24	20	4	0	83.3
FR3-IMGT	116	229	114	100	14	0	87.7
CDR3-IMGT (germline)	230	235	6	6	0	0	100
Total	N/A	N/A	223	196	27	0	87.9


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  K  F  S  N  F  G  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  L  I  N  Y  D
                    Query_13767  13   GTCTGGATTCAAGTTCAGCAATTTTGGCATACATTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCACTTATAAATTATGA  102
V  87.9% (196/223)  IGHV3-33*01  72   ...........CC.....T.GC.A......G..C..........................................G.....TGG.....  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  K  K  Y  Y  A  D  A  V  K  G  R  F  T  I  S  R  D  T  P  K  N  T  V  T  L  Q  M  N
                    Query_13767  103  TGGAAGTAAGAAATATTATGCGGACGCCGTGAAGGGCCGATTTACCATCTCCAGAGACACTCCCAAGAACACGGTGACTCTCCAAATGAA  192
V  87.9% (196/223)  IGHV3-33*01  162  .........T.....C.....A...T................C................A.T...........C..TA...G........  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-------------------CDR3-IMGT------------------>     
                                        S  L  R  G  E  D  T  A  L  Y  Y  C  A  R  S  G  P  Y  G  S  G  K  D  Y  G  M  D  V  W  G
                    Query_13767  193  CAGTCTGAGAGGCGAGGACACGGCTCTCTATTACTGTGCGAGAAGCGGTCCCTATGGTTCGGGGAAGGACTACGGAATGGACGTCTGGGG  282
V  87.9% (196/223)  IGHV3-33*01  252  ...C.......C.............G.G...............-----------------------------------------------  294
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (14/14)   IGHD3-10*01  7    ---------------------------------------------------..............-------------------------  20
J  94.0% (47/50)    IGHJ6*02     13   --------------------------------------------------------------------.......T..............  34

                                                                  
                                        Q  G  T  R  V  I  V  S  S 
                    Query_13767  283  CCAAGGGACCAGGGTCATCGTCTCCTCA  310
J  94.0% (47/50)    IGHJ6*02     35   ...........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_1471

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*06                                                                                           347     7e-98
IGHD2-8*02                                                                                            16.1    2.1  
IGHJ3*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*06	IGHD2-8*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGTAC	TACTGGCGGTG	AA	GATAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGTACTACTGGCGGTGAAGATATC	ARSTTGGEDI	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  F  Y  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_13768  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTTCTACATGACCTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.8% (235/248)  IGHV3-11*06  47   ................................................A........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  S  S  R  S  G  H  S  N  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_13768  91   AATGGGTTTCATTCATTAGTAGTAGAAGTGGTCACTCAAACTACGCAGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  94.8% (235/248)  IGHV3-11*06  137  .G..........A............T...A..T..A...................................A..................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      R  N  S  L  F  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  S  T  T  G  G  E  D  
                    Query_13768  181  GGAACTCACTGTTTTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCGAGAAGTACTACTGGCGGTGAAGATA  270
V  94.8% (235/248)  IGHV3-11*06  227  A...........A.C...................................G.................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD2-8*02   10   -------------------------------------------------------------------------......T....------  20
J  100.0% (38/38)   IGHJ3*02     11   --------------------------------------------------------------------------------------....  14

                                      ->                                
                                      I  W  G  Q  G  T  M  V  T  V  S  S
                    Query_13768  271  TCTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  304
J  100.0% (38/38)   IGHJ3*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_1477

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           333     1e-93
IGHD6-13*01                                                                                           14.1    9.0  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-13*01	IGHJ4*02	VH	Yes	Out-of-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGCCGGTTTACTCGAGGATCTTTT	TAGCAGTAGC	AGATGCCACGAAAACGTTCCTTGATC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGCCGGTTTACTCGAGGATCTTTTTAGCAGTAGCAGATGCCACGAAAACGTTCCTTGATCAC	AKDAGLLEDLFSSSRCHENVP*S	238	307	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	24	12	12	0	0	100
CDR1-IMGT	25	48	24	23	1	0	95.8
FR2-IMGT	49	99	51	49	2	0	96.1
CDR2-IMGT	100	123	24	22	2	0	91.7
FR3-IMGT	124	237	114	109	5	0	95.6
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	233	223	10	0	95.7


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  I  M 
                    Query_13769  13   TGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCCATTATG  102
V  95.7% (223/233)  IGHV3-30*18  64   .............................C.....................................................AG....A  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  Y  D  G  I  N  K  H  Y  A  D  S  V  K  G  R  F  I  I  S  R  D  N  S  K  N  T  L  Y  L 
                    Query_13769  103  TCATATGATGGAATTAATAAACACTATGCAGACTCCGTGAAGGGCCGATTCATCATCTCCAGAGACAACTCCAAGAACACACTGTATCTG  192
V  95.7% (223/233)  IGHV3-30*18  154  .............G.......T..............................C...............T...........G.........  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><------------------------------CDR3-IMGT-----
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  A  G  L  L  E  D  L  F  S  S  S  R 
                    Query_13769  193  CAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTATATTACTGTGCGAAAGATGCCGGTTTACTCGAGGATCTTTTTAGCAGTAGCAGA  282
V  95.7% (223/233)  IGHV3-30*18  244  ...................................G.................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  90.0% (9/10)     IGHD6-13*01  6    -----------------------------------------------------------------------------......C...---  15

                                      ------------------------>                                  
                                       C  H  E  N  V  P  *  S  L  G  P  G  N  P  G  H  R  L  L   
                    Query_13769  283  TGCCACGAAAACGTTCCTTGATCACTGGGGCCAGGGAACCCTGGTCATCGTCTCCTCAG  341
J  97.2% (35/36)    IGHJ4*02     13   -----------------------........................C...........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_1476

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           274     8e-76
IGHD3-10*01                                                                                           18.0    0.63 
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGCTGGAGGGGGC	TTCGGGACGTTACTATAA	TGGACGGCGGGGGATTCC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGCTGGAGGGGGCTTCGGGACGTTACTATAATGGACGGCGGGGGATTCCGGACGTC	ARLEGASGRYYNGRRGIPDV	246	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	59	30	26	4	0	86.7
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	17	4	0	81
FR3-IMGT	132	245	114	97	17	0	85.1
CDR3-IMGT (germline)	246	248	3	3	0	0	100
Total	N/A	N/A	245	210	35	0	85.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  T  N  S  H  Y  W  V  W  I  R  Q  S  P  V  K  G  
                    Query_13770  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGCACCAATAGTCACTACTGGGTCTGGATCCGCCAGTCCCCAGTGAAGGGGC  93
V  85.7% (210/245)  IGHV4-39*01  50   .....TCC...A....C.........................GT.G....T.........G.............C......G........  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  I  G  T  V  F  Y  S  G  T  T  S  Y  N  P  S  L  R  G  R  V  T  I  S  V  G  P  S  
                    Query_13770  94   TGGAGTGGATTGGGACCGTCTTTTATAGCGGGACCACCTCCTACAACCCGTCCCTCAGGGGTCGAGTCACCATCTCCGTTGGCCCGTCCA  183
V  85.7% (210/245)  IGHV4-39*01  140  ...............GTA...A......T....G.....A.................A.A.............A.....A.A.A......  229
                                      L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      N  N  Q  F  S  L  E  V  R  S  V  T  A  A  D  T  S  I  Y  Y  C  A  R  L  E  G  A  S  G  R  
                    Query_13770  184  ACAACCAATTCTCCCTGGAGGTGAGGTCTGTGACCGCCGCGGACACCTCTATTTATTACTGTGCGCGGCTGGAGGGGGCTTCGGGACGTT  273
V  85.7% (210/245)  IGHV4-39*01  230  .G.....G.........A..C....C..............A.....GG..G.G............-------------------------  294
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                          
D  83.3% (15/18)    IGHD3-10*01  13   -------------------------------------------------------------------------------......GA...  23

                                      R3-IMGT------------------------>                                 
                                      Y  Y  N  G  R  R  G  I  P  D  V  W  G  Q  G  T  T  V  T  V  A  S 
                    Query_13770  274  ACTATAATGGACGGCGGGGGATTCCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCGCCTCA  338
D  83.3% (15/18)    IGHD3-10*01  24   .T.....----------------------------------------------------------  30
J  97.5% (39/40)    IGHJ6*02     23   -------------------------..................................T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_1475

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           332     3e-93
IGHD2-15*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	ACCCATT	TTGCAGTGGTGGTAGGTGC	GTCTCGGGCTTGAG	TGACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCATTTTGCAGTGGTGGTAGGTGCGTCTCGGGCTTGAGTGACCAC	ARDPFCSGGRCVSGLSDH	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	228	16	0	93.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  P  F  S  G  Y  Y  W  N  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13771  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGCCCTTCAGTGGCTACTACTGGAACTGGATCCGCCAGTCCCCAGGGAAGGGGCTGGAG  90
V  93.4% (228/244)  IGHV4-34*01  49   .................................T..........T..........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  R  G  G  S  T  T  Y  N  P  S  L  K  S  R  V  S  M  S  V  D  T  S  K  N 
                    Query_13771  91   TGGATTGGGGAAATCAATCGCGGTGGAAGCACCACCTACAACCCGTCCCTCAAGAGTCGAGTCAGCATGTCGGTAGACACGTCCAAGAAC  180
V  93.4% (228/244)  IGHV4-34*01  139  ...................ATA............A.............................C...A..A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  T  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  F  C  S  G  G  R  C 
                    Query_13771  181  CAGTTCTCCTTGACCCTGACCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGACCCATTTTGCAGTGGTGGTAGGTGC  270
V  93.4% (228/244)  IGHV4-34*01  229  .........C...AG....G...........................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  89.5% (17/19)    IGHD2-15*01  7    -----------------------------------------------------------------------...T...........C...  25

                                      -------------------->                                  
                                       V  S  G  L  S  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13771  271  GTCTCGGGCTTGAGTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.6% (40/41)    IGHJ4*02     8    --------------....T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_1474

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           313     2e-87
IGHD4-4*01                                                                                            16.1    2.3  
IGHJ6*02                                                                                              96.8    3e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD4-4*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	CCGATACC	ACAGTTACTAC	AGATATC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGACCGATACCACAGTTACTACAGATATCACTACAACTACCACGGTATGGACGTC	AKDRYHSYYRYHYNYHGMDV	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	104	10	0	91.2
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13772  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCCGGATTCACGTTCAGTAGTTATGGCATGCATTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-30*18  47   ............................T........C........C...........C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  S  V  A  V  I  S  D  D  G  F  E  H  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_13772  91   AGTCGGTGGCAGTTATTTCGGATGATGGATTCGAACACCATTATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCG  180
V  90.0% (225/250)  IGHV3-30*18  137  ...G............A..AT........AGTA.TA.AT.C..............................A.................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      E  K  T  L  Y  L  H  M  N  G  L  R  P  E  D  T  A  V  Y  Y  C  A  K  D  R  Y  H  S  Y  Y  
                    Query_13772  181  AGAAGACGCTGTATCTGCACATGAACGGCCTGAGACCGGAGGACACGGCAGTGTATTACTGTGCGAAAGACCGATACCACAGTTACTACA  270
V  90.0% (225/250)  IGHV3-30*18  227  ....C..............A......A........G.T...........T....................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  90.9% (10/11)    IGHD4-4*01   6    ------------------------------------------------------------------------------.....A.....-  16

                                      R3-IMGT------------------------>                                 
                                      R  Y  H  Y  N  Y  H  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_13772  271  GATATCACTACAACTACCACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  335
J  94.9% (56/59)    IGHJ6*02     4    ------.....T.....T....................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_173297

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           382     4e-108
IGHD4-17*01                                                                                           16.1    2.4   
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TACGC	TGACGACGGTG	TTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATACGCTGACGACGGTGTTAACTTTGATTAC	ARYADDGVNFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	288	266	22	0	92.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  G  E  V  K  K  P  G  A  S  V  K  V  S  C  K  T  S  G  Y  N  F  M  S  Y 
                    Query_13773  2    CAGCTGGTGCAGTCTGGAGGTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGACTTCTGGTTACAACTTTATGAGCTAT  91
V  92.4% (266/288)  IGHV1-18*01  7    ...................C...........................................G............C.....CC......  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  G  G  L  E  W  M  G  W  S  S  A  Y  N  G  N  T  N  Y  A  Q 
                    Query_13773  92   GGCATCAGTTGGGTGCGACAGGCCCCTGGAGGAGGACTTGAGTGGATGGGCTGGAGCAGCGCTTACAATGGTAACACAAACTATGCGCAG  181
V  92.4% (266/288)  IGHV1-18*01  97   ..T.....C.....................CA...G..............A....T..............................A...  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       D  F  Q  G  R  V  T  M  T  T  D  R  S  T  S  T  A  Y  L  V  L  R  S  L  S  S  D  D  T  A 
                    Query_13773  182  GACTTCCAGGGCAGAGTCACCATGACCACAGACAGATCCACGAGCACAGCCTACTTGGTGTTGAGGAGCCTGAGCTCTGACGACACGGCC  271
V  92.4% (266/288)  IGHV1-18*01  187  A.GC..............................C...................A...A.C.............A...............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------CDR3-IMGT------------>                                  
                                       V  Y  Y  C  A  R  Y  A  D  D  G  V  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13773  272  GTGTATTATTGTGCGAGATACGCTGACGACGGTGTTAACTTTGATTACTGGGGACAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  92.4% (266/288)  IGHV1-18*01  277  ........C.........----------------------------------------------------------------  294
                                       V  Y  Y  C  A  R                                                                 
D  90.9% (10/11)    IGHD4-17*01  1    -----------------------....T......------------------------------------------------  11
J  95.6% (43/45)    IGHJ4*02     4    -------------------------------------.......C........C............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_173296

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           344     6e-97
IGHD4-17*01                                                                                           14.1    8.4  
IGHJ3*01                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD4-17*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	CTACGGT	ACCTACGCGCGAACGTCCGG	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACTACGGTACCTACGCGCGAACGTCCGGTTTTGATTTC	ARDYGTYARTSGFDF	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  N  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13774  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAATTCCTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-21*01  47   ....................................C.....G.AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  I  S  Y  I  S  G  S  S  S  H  I  Y  Y  A  D  S  L  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13774  91   AGTGGATCTCATACATTAGTGGTAGTAGTAGTCACATATATTACGCAGACTCACTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.0% (235/250)  IGHV3-21*01  137  .....G......C.......A...........T.......C............G....................................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      N  N  S  L  Y  L  Q  L  N  T  L  T  A  D  D  T  A  V  Y  Y  C  A  R  D  Y  G  T  Y  A  R  
                    Query_13774  181  ACAACTCACTGTATCTGCAATTGAACACCCTGACAGCCGACGACACGGCTGTGTATTACTGTGCGAGAGACTACGGTACCTACGCGCGAA  270
V  94.0% (235/250)  IGHV3-21*01  227  .G..................A......G.....G......G.............................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD4-17*01  4    ----------------------------------------------------------------------.......-------------  10

                                      ---------------->                                  
                                      T  S  G  F  D  F  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13774  271  CGTCCGGTTTTGATTTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  97.7% (43/44)    IGHJ3*01     7    -------.......G....................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_173295

Length=398
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           385     5e-109
IGHD2-2*01                                                                                            25.7    0.003 
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	GGGACT	AGGATATTGTCGTGGTACC	GACTGCAC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGGACTAGGATATTGTCGTGGTACCGACTGCACCTACTACGGTTTGGACGTC	ARGLGYCRGTDCTYYGLDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	288	267	21	0	92.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  S  F  S  D  D
                    Query_13775  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCAGTTTCAGCGACGA  90
V  92.7% (267/288)  IGHV1-69*01  6    ..................G..........................................................CC......AG.T.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  I  L  N  Y  A  Q
                    Query_13775  91   TGCTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGCATCATCCCTATCTTTGGTATATTAAACTACGCACA  180
V  92.7% (267/288)  IGHV1-69*01  96   ........G.............................................G...................C.GC............  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  S  V  D  E  S  T  S  T  T  Y  M  E  L  S  S  L  R  S  D  D  A  A
                    Query_13775  181  GAAATTCCAGGGCAGAGTCACGATTTCCGTGGACGAGTCCACGAGCACAACCTACATGGAGCTGAGCAGCCTGAGGTCTGACGACGCGGC  270
V  92.7% (267/288)  IGHV1-69*01  186  ...G.....................A...C......A............G.........................A.....G...A....  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        V  Y  F  C  A  R  G  L  G  Y  C  R  G  T  D  C  T  Y  Y  G  L  D  V  W  G  Q  G  T  T  V
                    Query_13775  271  CGTGTATTTCTGTGCAAGGGGACTAGGATATTGTCGTGGTACCGACTGCACCTACTACGGTTTGGACGTCTGGGGCCAGGGGACCACGGT  360
V  92.7% (267/288)  IGHV1-69*01  276  ........A......G..------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  89.5% (17/19)    IGHD2-2*01   1    ------------------------..........A..A.....-----------------------------------------------  19
J  94.2% (49/52)    IGHJ6*02     11   ---------------------------------------------------..........A................A...........  49

                                                   
                                        I  V  S  S 
                    Query_13775  361  CATCGTCTCCTCA  373
J  94.2% (49/52)    IGHJ6*02     50   ..C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38921040


Query= Query_173294

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            396     2e-112
IGHD3-10*01                                                                                           21.8    0.046 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGAC	TGGTTCGGGGA	CTT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTAC	ARVTGSGTYSFDY	290	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	72	3	0	96
CDR1-IMGT	77	100	24	22	2	0	91.7
FR2-IMGT	101	151	51	50	1	0	98
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	101	13	0	88.6
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	295	274	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  G 
                    Query_13776  2    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCGGC  91
V  92.9% (274/295)  IGHV1-8*02   1    .....G.....G...........G...............................................................AC.  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       S  Y  D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  D  Y 
                    Query_13776  92   AGCTATGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATGAATCCTAACAGTGGGAACACAGACTAT  181
V  92.9% (274/295)  IGHV1-8*02   91   ..............................A..................................C...........T.......G....  180
                                       S  Y  D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  I  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  Y  M  E  L  S  S  L  G  S  A  D 
                    Query_13776  182  GCACAGAAGATCCGGGGCAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCTACATGGAGCTGAGTAGTCTGGGATCTGCCGAC  271
V  92.9% (274/295)  IGHV1-8*02   181  .........T...A.......................A...C..C.T........................C..C...A......AG...  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><--------------CDR3-IMGT-------------->                                 
                                       T  A  V  Y  Y  C  A  R  V  T  G  S  G  T  Y  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S 
                    Query_13776  272  ACGGCCGTCTATTACTGTGCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCA  361
V  92.9% (274/295)  IGHV1-8*02   271  ........G................-----------------------------------------------------------------  295
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (11/11)   IGHD3-10*01  10   -----------------------------...........--------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    -------------------------------------------...A......C....................................  47

                                       
                                       
                    Query_13776  362  G  362
J  95.8% (46/48)    IGHJ4*02     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_173293

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            325     3e-91
IGHD1-26*01                                                                                           12.2    31   
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TGTTTC	TATAGT	CGCGTTGGCTGCTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATGTTTCTATAGTCGCGTTGGCTGCTTCTTTGACTAC	ARCFYSRVGCFFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	228	20	0	91.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  A  S  E  F  T  F  S  T  Y  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13777  1    GGTCCCTGAGACTCTCCTGTGTAGCCTCTGAATTCACCTTTAGTACCTACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  91.9% (228/248)  IGHV3-7*01   47   .....................C........G..............G...T.GG.....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  R  H  D  E  T  V  K  T  Y  V  D  S  V  K  G  R  F  T  T  S  R  D  N  A  
                    Query_13777  91   AGTGGGTGGCAAACATAAGGCACGATGAAACTGTGAAAACCTATGTGGACTCTGTGAAGGGCCGATTCACCACGTCCAGAGACAACGCCA  180
V  91.9% (228/248)  IGHV3-7*01   137  ..........C.......A...A....G..G..A....TA................................TC................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  P  E  D  T  A  V  Y  Y  C  A  R  C  F  Y  S  R  V  G  
                    Query_13777  181  AGAACTCACTGTATCTGCAAATGGATAGCCTGAGACCTGAGGACACGGCTGTGTATTACTGTGCGAGATGTTTCTATAGTCGCGTTGGCT  270
V  91.9% (228/248)  IGHV3-7*01   227  .......................A.C.........G.C..............................----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD1-26*01  3    --------------------------------------------------------------------------......----------  8

                                      ------------->                                  
                                      C  F  F  D  Y  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_13777  271  GCTTCTTTGACTACTGGGGCCAGGGAGTGTTGGTCACCGTCTCCTCAG  318
J  90.9% (40/44)    IGHJ4*02     5    ----......................ACCC..................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_119249

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            308     4e-86
IGHD6-19*01                                                                                           16.1    2.1  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGG	GTGGCTGG	ACATC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGGGGTGGCTGGACATCTGACTCC	TRGGGWTSDS	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	249	7	6	1	0	85.7
Total	N/A	N/A	249	223	26	0	89.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  D  N  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13778  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCATGTTTGATAACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.6% (223/249)  IGHV3-7*01   47   ...............................A....CC...AG..G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  N  Q  D  G  S  E  E  H  Y  V  D  S  V  K  G  R  F  T  I  S  T  D  N  A  
                    Query_13778  91   AGTGGGTGGCCATCATCAACCAGGATGGAAGTGAGGAACACTATGTGGACTCAGTGAAGGGCCGATTCACCATCTCCACAGACAACGCCA  180
V  89.6% (223/249)  IGHV3-7*01   137  ............A...A..G..A............A..T.............T.........................G...........  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  F  L  Q  M  N  G  L  G  I  E  D  T  A  V  Y  Y  C  T  R  G  G  G  W  T  S  D  
                    Query_13778  181  AGAACACACTGTTTCTACAAATGAATGGCCTGGGAATCGAGGACACGGCTGTATATTATTGTACGAGAGGGGGTGGCTGGACATCTGACT  270
V  89.6% (223/249)  IGHV3-7*01   227  .....T......A...G........CA.....A..GC...............G.....C...G......---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  11   ------------------------------------------------------------------------........----------  18
J  97.3% (36/37)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                              
                                      S  W  G  Q  G  T  L  V  T  V  S 
                    Query_13778  271  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCC  302
J  97.3% (36/37)    IGHJ4*02     13   A...............................  44


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_173291

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           344     6e-97
IGHD6-19*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TGGGTTGGGCAA	CAGTGGCTGGTAC	GGAGT	CTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGGTTGGGCAACAGTGGCTGGTACGGAGTCTTTAACTTC	ARDGLGNSGWYGVFNF	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  N  M  H  W  V  R  Q  P  P  G  K  G  L  
                    Query_13779  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGCTTTAATATGCACTGGGTCCGCCAGCCTCCAGGCAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-30*04  47   ................................................A.GC...................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  L  A  V  I  S  Y  D  G  S  N  G  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13779  91   AGTGGTTGGCAGTTATATCATATGATGGAAGTAATGGACACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-30*04  137  .....G.............................AA.T...................................................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  G  T  L  Y  L  E  M  N  S  L  R  V  E  D  T  A  V  Y  F  C  A  R  D  G  L  G  N  S  G  
                    Query_13779  181  AGGGCACCCTGTATCTGGAAATGAACAGTCTGAGAGTTGAGGACACGGCTGTGTATTTCTGTGCGAGAGATGGGTTGGGCAACAGTGGCT  270
V  94.0% (235/250)  IGHV3-30*04  227  ..AA...G.........C..........C.......C....................A............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD6-19*01  9    ----------------------------------------------------------------------------------........  16

                                      T------------------>                                  
                                      W  Y  G  V  F  N  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13779  271  GGTACGGAGTCTTTAACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (13/13)   IGHD6-19*01  17   .....-------------------------------------------------  21
J  95.5% (42/44)    IGHJ4*02     5    ----------....G...A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_9669

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           350     8e-99
IGHD5-18*01                                                                                           25.7    0.003
IGHJ5*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CTAGA	CAGGCAGCTTTC	GGATACAGTTATGGTT	TCGGT	TGGTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGACAGGCAGCTTTCGGATACAGTTATGGTTTCGGTTGGTGCGACCCC	ARQAAFGYSYGFGWCDP	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	239	15	0	94.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  T  S  G  F  S  F  G  E  H  T  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13780  1    GGTCCCTGAGACTCTCCTGTACAACTTCTGGATTCAGCTTTGGTGAACATACTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.1% (239/254)  IGHV3-49*04  47   .......................G............C.........TT..G.......................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  F  I  R  S  K  S  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  
                    Query_13780  91   AGTGGGTAGGTTTCATCAGAAGCAAATCTTATGGTGGGACAACAGAATACGCCGCCTCTGTGAAAGGCAGATTCACCATCTCAAGGGATG  180
V  94.1% (239/254)  IGHV3-49*04  137  ................T.........G............................G.............................A....  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  D  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R  Q  A  A  F  G  
                    Query_13780  181  ATTCCGATAGTATCGCCTATCTGCAAATGAACAGCCTTAAAACCGAGGACACAGCCGTATATTACTGTGCTAGACAGGCAGCTTTCGGAT  270
V  94.1% (239/254)  IGHV3-49*04  227  .....A.A..C..........................G....................G.........A.....----------------  300
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  93.8% (15/16)    IGHD5-18*01  3    --------------------------------------------------------------------------------------....  6

                                      DR3-IMGT-------------------->                                  
                                      Y  S  Y  G  F  G  W  C  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13780  271  ACAGTTATGGTTTCGGTTGGTGCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
D  93.8% (15/16)    IGHD5-18*01  7    ....C.......---------------------------------------------------  18
J  97.8% (45/46)    IGHJ5*02     6    -----------------....T.........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_9666

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHD7-27*01                                                                                           12.2    37    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGGCCAACCGCCTGGGCGTTAAC	ACTGGG	AC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGCCAACCGCCTGGGCGTTAACACTGGGACCTACTTTGACTCC	ARRANRLGVNTGTYFDS	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	275	15	0	94.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  R  K  P  G  E  S  L  K  I  S  C  K  G  S  G  D  T  F  P  G  Y
                    Query_13781  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAGAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGAGACACCTTTCCCGGCTA  90
V  94.8% (275/290)  IGHV5-51*01  6    .............................A...........................................T...G....A..A....  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  F  I  F  P  G  D  S  D  T  K  Y  S  P
                    Query_13781  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAGGGCCTGGAGTGGATGGGGTTCATCTTTCCTGGTGACTCTGATACCAAATACAGCCC  180
V  94.8% (275/290)  IGHV5-51*01  96   .................................A..................A......A....................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        A  F  Q  G  Q  V  T  F  S  A  D  K  S  I  G  T  A  Y  L  Q  W  S  R  L  K  A  S  D  T  A
                    Query_13781  181  GGCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCGGCACCGCCTACCTGCAGTGGAGTAGGTTGAAGGCCTCGGACACCGC  270
V  94.8% (275/290)  IGHV5-51*01  186  .T....................A....................A......................C..CC...................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  R  A  N  R  L  G  V  N  T  G  T  Y  F  D  S  W  G  Q  G  T  L  V  S  V
                    Query_13781  271  CATGTATTACTGTGCGAGACGGGCCAACCGCCTGGGCGTTAACACTGGGACCTACTTTGACTCCTGGGGCCAGGGAACCCTGGTCTCCGT  360
V  94.8% (275/290)  IGHV5-51*01  276  ....................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (6/6)     IGHD7-27*01  4    -------------------------------------------......-----------------------------------------  9
J  95.7% (45/47)    IGHJ4*02     2    ---------------------------------------------------...........A......................A....  40

                                              
                                        S  S  
                    Query_13781  361  CTCCTCAG  368
J  95.7% (45/47)    IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_222196

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           349     2e-98
IGHD3-3*01                                                                                            27.6    8e-04
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	CAGCTA	TACAATTTTTGGAGTGG	ACACATAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACAGCTATACAATTTTTGGAGTGGACACATATTACTTTGACTGG	ANSYTIFGVDTYYFDW	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  T  S  G  F  T  F  S  S  C  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13782  1    GGTCCCTGAGACTCTCCTGTGCAACCTCTGGATTCACCTTTAGCAGCTGTGCCATGAGCTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.1% (235/247)  IGHV3-23*01  47   .......................G........................A..............................G..........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  G  S  G  G  T  T  Y  Y  A  D  P  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13782  91   AGTGGGTCTCAAGTATTAGTGGGAGTGGTGGTACGACATACTACGCAGACCCCGTGAAGGGCCGCTTCACCATCTCCAGAGACAACTCCA  180
V  95.1% (235/247)  IGHV3-23*01  137  ...........GC.........T..........GC...............T.............G....................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  F  C  A  N  S  Y  T  I  F  G  V  
                    Query_13782  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTTCTGTGCGAACAGCTATACAATTTTTGGAGTGG  270
V  95.1% (235/247)  IGHV3-23*01  227  .........................................................A.........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.1% (16/17)    IGHD3-3*01   5    -------------------------------------------------------------------------...G.............  21

                                      T------------------>                                  
                                      D  T  Y  Y  F  D  W  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13782  271  ACACATATTACTTTGACTGGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  95.7% (44/46)    IGHJ4*02     3    --------..........AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_9664

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           265     5e-73
IGHD2-2*01                                                                                            18.0    0.59 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	ACG	AGTAGTGCCAGC	CCTTACTACCCCCT	CGGCA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAACGAGTAGTGCCAGCCCTTACTACCCCCTCGGCATGGACGTC	VRTSSASPYYPLGMDV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	15	26	12	12	0	0	100
CDR1-IMGT	27	50	24	19	5	0	79.2
FR2-IMGT	51	101	51	48	3	0	94.1
CDR2-IMGT	102	125	24	19	5	0	79.2
FR3-IMGT	126	239	114	97	17	0	85.1
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	231	200	31	0	86.6


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  D  S  F  A  M  H  W  V  R  Q  A  P  D  R  G  L  E  W  V  A  V  I 
                    Query_13783  15   TGTGCAGCCTCTGGATTCACCTTCGACAGCTTTGCGATGCACTGGGTCCGCCAGGCTCCCGACAGGGGGCTGGAGTGGGTGGCAGTTATT  104
V  86.6% (200/231)  IGHV3-30*04  64   ........................AGT....A...T.......................A.G..A........................A  153
                                       C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  Y  D  G  S  P  Q  F  Y  A  D  S  V  K  G  R  F  S  V  S  R  D  N  S  A  N  T  V  S  L 
                    Query_13783  105  TCATATGATGGAAGTCCTCAGTTTTACGCAGACTCCGTGAAGGGCCGCTTCAGCGTCTCCAGAGACAATTCCGCGAACACGGTGTCTCTG  194
V  86.6% (200/231)  IGHV3-30*04  154  ...............AA.A.A.AC.......................A....C.A.................AA.......C...A....  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-------------------CDR3-IMGT----------------
                                       Q  M  D  D  L  R  R  E  D  S  G  V  Y  Y  C  V  R  T  S  S  A  S  P  Y  Y  P  L  G  M  D 
                    Query_13783  195  CAAATGGACGACCTGAGACGTGAGGACTCGGGTGTTTATTACTGTGTGAGAACGAGTAGTGCCAGCCCTTACTACCCCCTCGGCATGGAC  284
V  86.6% (200/231)  IGHV3-30*04  244  ......A..AG.......GC.......A...C...G..........C....---------------------------------------  294
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                        
D  91.7% (11/12)    IGHD2-2*01   11   ------------------------------------------------------......A.....------------------------  22
J  95.2% (40/42)    IGHJ6*02     17   --------------------------------------------------------------------------------...T......  26

                                      -->                             
                                       V  W  G  Q  G  T  T  V  T  V  S
                    Query_13783  285  GTCTGGGGCCAGGGGACCACGGTCACCGTCTC  316
J  95.2% (40/42)    IGHJ6*02     27   ...........A....................  58


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_9665

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           363     1e-102
IGHD3-16*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCTCT	TTACGTTTGGGGGAGCTATG	G	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCTTTACGTTTGGGGGAGCTATGGACTACTTTGACTAC	ARGLFTFGGAMDYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	241	9	0	96.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  V  A  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_13784  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCGCCATCAGCAGTGGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  96.4% (241/250)  IGHV4-31*03  49   ...............................G.T..........................................A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  R  G  S  T  Y  S  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13784  91   CTGGAGTGGATTGGGTACATCTATTACCGTGGGAGCACGTACTCCAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  96.4% (241/250)  IGHV4-31*03  139  ...........................A..........C....A..............................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  L  S  V  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  L  F  T  F  G  G 
                    Query_13784  181  AAGAACCAGTTGTCCGTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTATTGTGCGAGAGGCCTCTTTACGTTTGGGGGA  270
V  96.4% (241/250)  IGHV4-31*03  229  ...........C...C...........................................C..........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-16*01  10   ----------------------------------------------------------------------------..............  23

                                      GT------------------>                                  
                                       A  M  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13784  271  GCTATGGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  95.0% (19/20)    IGHD3-16*01  24   .T....-------------------------------------------------  29
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_119240

Length=419
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           366     2e-103
IGHD2-21*02                                                                                           14.1    10    
IGHJ6*02                                                                                              94.9    1e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGCAC	TGTAGTGCTGACT	AATAGGCGCGGACTTACGGGGCCAGG	CTACC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCGCACTGTAGTGCTGACTAATAGGCGCGGACTTACGGGGCCAGGCTACCACTACTACGGCATGGACGTC	ARERTVVLTNRRGLTGPGYHYYGMDV	284	361	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	66	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	17	7	0	70.8
FR3-IMGT	170	283	114	101	13	0	88.6
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	262	28	0	90.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  T  A  S  G  Y  T  F  S  S  Y 
                    Query_13785  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCACGGCCTCTGGGTACACCTTTAGCAGTTAT  91
V  90.3% (262/290)  IGHV1-18*01  7    .................................................A...........A...T.....T..........C...C...  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       S  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  K  N  G  D  T  K  Y  E  Q 
                    Query_13785  92   AGTATCAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGCCAAGAACGGAGACACCAAATATGAGCAG  181
V  90.3% (262/290)  IGHV1-18*01  97   G.......C.....................................................TT.C..T..TA....A..C....CA...  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  D  R  I  F  L  T  T  E  T  S  T  S  T  A  Y  M  E  V  T  S  L  R  S  D  D  T  A 
                    Query_13785  182  AAGTTCCAGGACAGAATCTTCCTGACCACAGAGACATCCACGAGCACAGCCTACATGGAGGTGACGAGCCTGAGATCTGACGACACGGCC  271
V  90.3% (262/290)  IGHV1-18*01  187  ...C......G....G..AC.A..........C...........................C...G.........................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------------------------CDR3-IMGT--------------------------------->
                                       V  Y  Y  C  A  R  E  R  T  V  V  L  T  N  R  R  G  L  T  G  P  G  Y  H  Y  Y  G  M  D  V 
                    Query_13785  272  GTCTATTACTGTGCGAGAGAGCGCACTGTAGTGCTGACTAATAGGCGCGGACTTACGGGGCCAGGCTACCACTACTACGGCATGGACGTC  361
V  90.3% (262/290)  IGHV1-18*01  277  ..G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  84.6% (11/13)    IGHD2-21*02  8    --------------------------...G...G.....---------------------------------------------------  20
J  94.8% (55/58)    IGHJ6*02     5    -----------------------------------------------------------------....T..........T.........  29

                                                                       
                                       W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13785  362  TGGGGCCAAGGGACCACTGTCACCGTCTCCTCA  394
J  94.8% (55/58)    IGHJ6*02     30   .................G...............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 41130072


Query= Query_9663

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           377     9e-107
IGHD3-10*01                                                                                           23.8    0.011 
IGHJ5*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCA	GGTTCGGGGAATTAT	GAGGG	CTGGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCAGGTTCGGGGAATTATGAGGGCTGGCTCGACCCC	ARSGSGNYEGWLDP	261	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	49	1	0	98
CDR1-IMGT	51	74	24	22	2	0	91.7
FR2-IMGT	75	125	51	50	1	0	98
CDR2-IMGT	126	146	21	17	4	0	81
FR3-IMGT	147	260	114	110	4	0	96.5
CDR3-IMGT (germline)	261	265	5	5	0	0	100
Total	N/A	N/A	265	253	12	0	95.5


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  P  Y  Y  W  S  W  I  R  
                    Query_13786  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCCTTACTACTGGAGCTGGATCCGGC  90
V  95.5% (253/265)  IGHV4-59*01  26   ................T................................................AG.......................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  F  Y  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_13786  91   AGCCCCCCGGGAAGGGACTGGAGTGGATTGGGTATATCTTCTACAGTGGCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  95.5% (253/265)  IGHV4-59*01  116  .......A...............................AT........G.G......................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  R  L  S  S  V  T  P  A  D  T  A  V  Y  Y  C  A  R  S  
                    Query_13786  181  TATCAGTAGACACGTCCAAGAACCAGTTCTCCCTGAGGCTGAGTTCTGTGACCCCTGCGGACACGGCCGTATATTACTGTGCGAGGTCAG  270
V  95.5% (253/265)  IGHV4-59*01  206  ....................................A......C.........G................G..............-----  290
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A        
D  93.3% (14/15)    IGHD3-10*01  11   -----------------------------------------------------------------------------------------.  11

                                      -------CDR3-IMGT--------------->                                  
                                      G  S  G  N  Y  E  G  W  L  D  P  W  D  Q  G  T  L  V  T  V  S  S  
                    Query_13786  271  GTTCGGGGAATTATGAGGGCTGGCTCGACCCCTGGGACCAGGGAACCCTGGTCACCGTCTCCTCAG  336
D  93.3% (14/15)    IGHD3-10*01  12   .........G....----------------------------------------------------  25
J  95.7% (45/47)    IGHJ5*02     5    -------------------....T............G.............................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_9660

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         371     7e-105
IGHD3-10*01                                                                                           43.0    2e-08 
IGHJ4*02                                                                                              71.8    8e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCGTGG	CTATGGTTCGGGGAGTTATTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGATCGTGGCTATGGTTCGGGGAGTTATTATTTTGACAAC	ARDRGYGSGSYYFDN	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	30	0	0	100
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	110	4	0	96.5
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	244	7	0	97.2


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_13787    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  97.2% (244/251)  IGHV4-30-4*01  49   ..................A.......................................................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  H  Y  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13787    91   CTGGAGTGGATTGGGTACATCCATTACAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCC  180
V  97.2% (244/251)  IGHV4-30-4*01  139  .....................T............G.................................T.....................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  A  Y  H  C  A  R  D  R  G  Y  G  S  G 
                    Query_13787    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGCCTATCACTGTGCCAGAGATCGTGGCTATGGTTCGGGG  270
V  97.2% (244/251)  IGHV4-30-4*01  229  ....................................................TG...T.............-------------------  299
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (22/22)   IGHD3-10*01    7    -----------------------------------------------------------------------------.............  19

                                        ----------------->                                  
                                         S  Y  Y  F  D  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13787    271  AGTTATTATTTTGACAACTGGGGCCAGGGAACCCTGGTCACCGTCTCGTCAG  322
D  100.0% (22/22)   IGHD3-10*01    20   .........-------------------------------------------  28
J  95.3% (41/43)    IGHJ4*02       6    ---------......T...............................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_9661

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           304     1e-84
IGHD4-17*01                                                                                           14.1    8.5  
IGHJ5*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGAATAC	AG	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGAATACAGCAACTGGGTCGACCCC	ARDSGEYSNWVDP	252	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	59	30	29	1	0	96.7
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	137	27	19	2	6	70.4
FR3-IMGT	138	251	114	105	9	0	92.1
CDR3-IMGT (germline)	252	259	8	8	0	0	100
Total	N/A	N/A	256	227	23	6	88.7


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  S  V  S  G  D  S  V  S  S  G  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  
                    Query_13788  4    CCCTGAGACTCTCCTGTAGTGTCTCTGGTGACTCCGTCAGCAGTGGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGGC  93
V  88.7% (227/256)  IGHV4-61*01  50   .....TCC...A....C.C...........G.............................G...........................A.  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><--------CDR2-IMGT--------><---------------------------------------------
                                      L  E  W  I  G  H  I  Y  N  Y  N  R  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  I  S  V  D  
                    Query_13788  94   TGGAGTGGATCGGTCATATCTATAACTATAACAGAGGGAGCACCAATTATAATCCCTCCCTCCAAAGTCGAGTCACCATATCAGTAGACA  183
V  88.7% (227/256)  IGHV4-61*01  140  ..........T..GT........T..------..T...........C..C..C.........A.G.........................  223
                                      L  E  W  I  G  Y  I  Y  Y        S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------CDR3-IM
                                      T  S  K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  S  G  E  Y  
                    Query_13788  184  CATCCAAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATTCCGGTGAATACA  273
V  88.7% (227/256)  IGHV4-61*01  224  .G........................C...G...........................G.................--------------  299
                                      T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                 
D  90.0% (9/10)     IGHD4-17*01  7    -------------------------------------------------------------------------------......C...-  16

                                      GT-------------->                                  
                                      S  N  W  V  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13788  274  GCAACTGGGTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
J  98.0% (49/50)    IGHJ5*02     2    -.......T..........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_309603

Length=439
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           361     5e-102
IGHD3-16*01                                                                                           18.0    0.75  
IGHJ6*02                                                                                              73.7    3e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD3-16*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTGT	TCCCCCCTCAGGCCCGAGGAGG	ATGATCGCGTTTGGG	CCCCCTGGGACGCCCATACCCCCCCTCCGATTACCC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCCCCCCTCAGGCCCGAGGAGGATGATCGCGTTTGGGCCCCCTGGGACGCCCATACCCCCCCTCCGATTACCCACTACTCGGCTATGGAGGTC	SPLRPEEDDRVWAPWDAHTPPPITHYSAMEV	291	383	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	68	6	0	91.9
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	21	3	0	87.5
FR3-IMGT	177	290	114	102	12	0	89.5
Total	N/A	N/A	287	259	28	0	90.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  G  G  V  K  R  P  G  A  S  V  R  V  S  C  K  A  S  A  Y  T  F  T  
                    Query_13789  4    AGGTCCAGCTGGTACAGTCTGGAGGTGGGGTGAAGAGGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGCTTACACTTTTACCA  93
V  90.2% (259/287)  IGHV1-18*04  2    ....T........G..........C..A........A.................A....................G......C.......  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      T  Y  V  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  V  K  N  G  N  T  N  Y  
                    Query_13789  94   CCTACGTGATCAGCTGGGTGCGACAGGCCCCAGGACAAGGACTTGAGTGGATGGGATGGATCAGCGTTAAGAATGGTAACACAAACTATG  183
V  90.2% (259/287)  IGHV1-18*04  92   G.....GT.......................T........G.........................C.T.C...................  181
                                      S  Y  G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      A  P  E  F  Q  G  R  L  T  M  T  T  D  A  F  T  T  T  A  Y  L  D  L  T  S  L  R  S  D  D  
                    Query_13789  184  CACCGGAGTTCCAGGGCAGACTCACCATGACCACAGACGCATTCACGACCACAGCCTATCTGGACCTGACGAGCCTGAGATCTGACGACC  273
V  90.2% (259/287)  IGHV1-18*04  182  ...A.A..C...........G.................A...C.....G.........CA....G....G...................A  271
                                      A  Q  K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  

                                      ----------------><-----------------------------------------CDR3-IMGT----------------------
                                      P  A  V  Y  Y  C  S  P  L  R  P  E  E  D  D  R  V  W  A  P  W  D  A  H  T  P  P  P  I  T  
                    Query_13789  274  CGGCCGTGTATTACTGTTCCCCCCTCAGGCCCGAGGAGGATGATCGCGTTTGGGCCCCCTGGGACGCCCATACCCCCCCTCCGATTACCC  363
V  90.2% (259/287)  IGHV1-18*04  272  .................-------------------------------------------------------------------------  288
                                      T  A  V  Y  Y  C                                                                          
D  86.7% (13/15)    IGHD3-16*01  6    ---------------------------------------.....TA........------------------------------------  20

                                      ------------------->                                 
                                      H  Y  S  A  M  E  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_13789  364  ACTACTCGGCTATGGAGGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  416
J  90.6% (48/53)    IGHJ6*02     10   ......AC.G......C.........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 43233912


Query= Query_309602

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD3-9*01                                                                                            14.1    8.3  
IGHJ2*01                                                                                              93.0    3e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTACGC	TTTTGAC	GGCA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTACGCTTTTGACGGCAACTGGTCCTTCGATCTC	AREYAFDGNWSFDL	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	235	15	0	94


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  H  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13790  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGCCATGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  90
V  94.0% (235/250)  IGHV3-23*01  47   ...............................................T...................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  T  T  G  G  S  T  H  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_13790  91   AGTGGGTTTCAGCTATTACTACTACTGGTGGTAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  180
V  94.0% (235/250)  IGHV3-23*01  137  .......C..........G.GG..G.............T................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  S  M  E  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  Y  A  F  D  G  N  
                    Query_13790  181  AGAACACGTTGTCTATGGAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAGAGAGTACGCTTTTGACGGCAACT  270
V  94.0% (235/250)  IGHV3-23*01  227  ........C...A.C..C......................G.........................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-9*01   12   ----------------------------------------------------------------------------.......-------  18
J  98.0% (50/51)    IGHJ2*01     3    ---------------------------------------------------------------------------------------...  5

                                      ------------->                                  
                                      W  S  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_13790  271  GGTCCTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  318
J  98.0% (50/51)    IGHJ2*01     6    ...A............................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_332947

Length=417
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           332     4e-93
IGHD3-3*01                                                                                            27.6    0.001
IGHJ4*02                                                                                              66.1    5e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GCTCTTGGGTCAAAGTGAGATACAAAAACCGAGTGGATGGACTGG	CGATTTTTGGACTGGATATT	TCGTTA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCTCTTGGGTCAAAGTGAGATACAAAAACCGAGTGGATGGACTGGCGATTTTTGGACTGGATATTTCGTTAAC	ARLLGQSEIQKPSGWTGDFWTGYFVN	284	361	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	61	9	0	87.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	43	8	0	84.3
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	250	38	0	86.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  P  E  V  K  M  P  G  A  S  V  R  L  S  C  R  P  S  G  Y  P  F  T  E  N
                    Query_13791  1    GCAGCTGGTGCAGTCTGGACCTGAGGTAAAGATGCCTGGGGCCTCAGTGAGACTTTCCTGCAGGCCATCTGGATACCCCTTCACCGAAAA  90
V  86.8% (250/288)  IGHV1-46*01  6    ..................GG.......G....A.................AGG.........A.G...........A........AGCT.  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  Y  W  M  R  Q  A  P  G  Q  R  F  E  W  V  G  L  V  H  P  G  G  G  R  T  A  Y  A  Q
                    Query_13791  91   CTATATATACTGGATGCGACAGGCCCCTGGACAAAGGTTTGAGTGGGTGGGACTGGTCCACCCTGGTGGTGGCAGGACAGCCTACGCCCA  180
V  86.8% (250/288)  IGHV1-46*01  96   ......GC.....G....................G..C........A.....A.AA..A.....A.......T..C...AG......A..  185
                                        Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  R  G  R  V  I  M  T  G  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  K  S  G  D  T  A
                    Query_13791  181  GAAGTTCCGGGGCAGAGTCATCATGACCGGGGACACGTCCACGAGCACAGTATACATGGAACTGAGCAGCCTGAAATCTGGGGACACGGC  270
V  86.8% (250/288)  IGHV1-46*01  186  ........A...........C.......A......................C........G.............G.....A.........  275
                                        K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------------------CDR3-IMGT---------------------------------
                                        V  Y  Y  C  A  R  L  L  G  Q  S  E  I  Q  K  P  S  G  W  T  G  D  F  W  T  G  Y  F  V  N
                    Query_13791  271  CGTATATTACTGTGCGAGGCTCTTGGGTCAAAGTGAGATACAAAAACCGAGTGGATGGACTGGCGATTTTTGGACTGGATATTTCGTTAA  360
V  86.8% (250/288)  IGHV1-46*01  276  ...G..............------------------------------------------------------------------------  293
                                        V  Y  Y  C  A                                                                           
D  90.0% (18/20)    IGHD3-3*01   7    ---------------------------------------------------------------...........G...T....-------  26
J  100.0% (34/34)   IGHJ4*02     13   -----------------------------------------------------------------------------------------.  13

                                      >                                
                                        W  G  Q  G  T  L  V  T  V  S  S
                    Query_13791  361  CTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  393
J  100.0% (34/34)   IGHJ4*02     14   .................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40919688


Query= Query_216716

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-10*01                                                                                           14.1    8.2  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGCGC	ACTATGG	GTCCAG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATGCGCACTATGGGTCCAGCTTTGACACC	AKDAHYGSSFDT	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  S  M  N  W  V  R  Q  G  P  G  K  G  L  
                    Query_13792  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTTTTCCATGAACTGGGTCCGCCAGGGTCCAGGGAAGGGGCTGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ................................................A.G......G..............C.................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  S  G  S  G  S  S  T  Y  N  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13792  91   AGTGGGTCTCGTTTATTAGTGGTAGTGGTAGCAGTACATATAACGCAGACTCCGTAAAGGGCCGCTTCACCATCTCCAGAGACAATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  ..........AGC................G.T..C.....CT.............G........G.........................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      R  N  T  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  K  D  A  H  Y  G  S  S  
                    Query_13792  181  GGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAAAGATGCGCACTATGGGTCCAGCT  270
V  93.6% (234/250)  IGHV3-23*01  227  A.......................................G.............................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-10*01  6    ---------------------------------------------------------------------------.......--------  12
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  D  T  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13792  271  TTGACACCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  95.5% (42/44)    IGHJ4*02     7    .....TA...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_27401

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           367     5e-104
IGHD5-18*01                                                                                           27.6    7e-04 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGTTATGGCTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGTTATGGCTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	114	0	0	100
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	239	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13793  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTAGAA  90
V  98.4% (239/243)  IGHV4-59*01  49   ......................................................................................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13793  91   TGGATTGGGAATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.4% (239/243)  IGHV4-59*01  139  .........T................................................................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y 
                    Query_13793  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGTTATGGCTACTACTAC  270
V  98.4% (239/243)  IGHV4-59*01  229  ...........................................................G...---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  90.0% (18/20)    IGHD5-18*01  1    ----------------------------------------------------------------..........C.....T...------  20
J  100.0% (48/48)   IGHJ4*02     1    -------------------------------------------------------------------------------------.....  5

                                      -------->                                  
                                       F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13793  271  TTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (48/48)   IGHJ4*02     6    ...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_37368

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           396     2e-112
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	5	78	74	71	3	0	95.9
CDR1-IMGT	79	102	24	23	1	0	95.8
FR2-IMGT	103	153	51	49	2	0	96.1
CDR2-IMGT	154	177	24	22	2	0	91.7
FR3-IMGT	178	291	114	102	12	0	89.5
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	293	273	20	0	93.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  
                    Query_13794  5    AGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCTTGTAAGGGTTCTGGATACACCTTTACCA  94
V  93.2% (273/293)  IGHV5-51*03  2    ....G........G...............................................C...................G........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  
                    Query_13794  95   GCTACTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACA  184
V  93.2% (273/293)  IGHV5-51*03  92   ............G.......................A...................................A....G.....A......  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  S  Q  G  H  V  T  I  S  A  N  R  S  I  T  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  
                    Query_13794  185  GCCCGTCCTCCCAAGGCCACGTCACCATCTCAGCCAACAGGTCCATCACGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACA  274
V  93.2% (273/293)  IGHV5-51*03  182  .........T.........G...............G...A........GC...........G...............A.....T......  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  
                    Query_13794  275  CCGCCGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCT  364
V  93.2% (273/293)  IGHV5-51*03  272  .....A.G...............-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD6-19*01  5    --------------------------............----------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    ------------------------------------------------..........................................  42

                                            
                                      S  S  
                    Query_13794  365  CCTCAG  370
J  100.0% (48/48)   IGHJ4*02     43   ......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_115900

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           341     5e-96
IGHD2-15*01                                                                                           39.1    3e-07
IGHJ4*02                                                                                              50.7    2e-10


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCGACCGATCCCGGG	TATTGTAGTGGTGGTTTCTGCTACTC	GGCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCGACCGATCCCGGGTATTGTAGTGGTGGTTTCTGCTACTCGGCGTTTGACTCC	AATDPGYCSGGFCYSAFDS	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	232	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  S  A  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_13795  1    ACCCTGTCCCTCACCTGCACTGTCTCTAGTGCCTCCGTCAGCAGTGGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  94.3% (232/246)  IGHV4-61*01  49   ...........................G...G..........................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  N  G  D  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  E  T  S 
                    Query_13795  91   CTGGAGTGGATTGGATATATCTATTACAATGGAGACACCAACTACAATCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGAGACGTCC  180
V  94.3% (232/246)  IGHV4-61*01  139  ..............G.............G...GAG............C...................................C......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  A  T  D  P  G  Y  C  S 
                    Query_13795  181  AAGAACCAGTTCTCCCTTAACCTGAGCTCTGTGACTGCCGCGGACACGGCCATGTATTACTGTGCGGCGACCGATCCCGGGTATTGTAGT  270
V  94.3% (232/246)  IGHV4-61*01  229  .................G..G..............C..T............G..............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  92.3% (24/26)    IGHD2-15*01  5    ---------------------------------------------------------------------------------.........  13

                                      3-IMGT----------------------->                                
                                       G  G  F  C  Y  S  A  F  D  S  W  G  Q  G  T  P  F  P  L  S  S
                    Query_13795  271  GGTGGTTTCTGCTACTCGGCGTTTGACTCCTGGGGCCAGGGAACCCCGTTCCCCCTCTCCTC  332
D  92.3% (24/26)    IGHD2-15*01  14   ......AG.........---------------------------------------------  30
J  87.8% (36/41)    IGHJ4*02     6    ---------------------.......A.................T.G..A..G.......  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_37361

Length=372
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV6-1*01                                                                                            346     2e-97
IGHD3-3*01                                                                                            21.8    0.044
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV6-1*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAG	CGATTTGTGGAGAGGTT	CTACCCCTAAG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAGAGATAGCGATTTGTGGAGAGGTTCTACCCCTAAGTTTGACTAC	ARDSDLWRGSTPKFDY	269	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	46	45	40	5	0	88.9
CDR1-IMGT	47	76	30	25	5	0	83.3
FR2-IMGT	77	127	51	48	3	0	94.1
CDR2-IMGT	128	154	27	26	1	0	96.3
FR3-IMGT	155	268	114	102	12	0	89.5
CDR3-IMGT (germline)	269	276	8	7	1	0	87.5
Total	N/A	N/A	275	248	27	0	90.2


Alignments

                                      <-----------------FR1-IMGT------------------><----------CDR1-IMGT---------><--------------
                                       L  V  K  P  T  Q  T  L  S  L  T  C  T  I  S  G  D  S  V  S  S  E  S  V  A  W  N  W  V  R 
                    Query_13796  2    CTGGTGAAACCCACACAGACTCTCTCACTCACCTGTACCATCTCCGGAGACAGTGTCTCCAGCGAAAGTGTTGCTTGGAACTGGGTCAGG  91
V  90.2% (248/275)  IGHV6-1*01   31   ........G...T.G.....C...............G..........G...........T...A.C....C.............A.....  120
                                       L  V  K  P  S  Q  T  L  S  L  T  C  A  I  S  G  D  S  V  S  S  N  S  A  A  W  N  W  I  R 

                                      ------FR2-IMGT---------------------><--------CDR2-IMGT--------><--------------------------
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  M  S  K  W  Y  N  H  Y  S  D  S  V  K  S  R 
                    Query_13796  92   CAGTCGCCGTCGAGAGGCCTTGAGTGGCTGGGAAGGACATACTACATGTCCAAGTGGTATAATCATTATTCAGATTCTGTGAAAAGTCGA  181
V  90.2% (248/275)  IGHV6-1*01   121  .....C..A.....................................G................G.....G...TA...............  210
                                       Q  S  P  S  R  G  L  E  W  L  G  R  T  Y  Y  R  S  K  W  Y  N  D  Y  A  V  S  V  K  S  R 

                                      --------------------------FR3-IMGT----------------------------------------------------><--
                                       M  T  I  D  P  D  T  S  K  N  Q  F  S  L  Q  M  N  S  V  T  P  E  D  T  A  M  Y  Y  C  A 
                    Query_13796  182  ATGACCATCGACCCAGACACATCCAAGAACCAGTTCTCGCTACAGATGAACTCTGTGACCCCCGAGGACACGGCTATGTACTACTGTGCT  271
V  90.2% (248/275)  IGHV6-1*01   211  ..A......A............................C..G...C.............T...............G....T........A  300
                                       I  T  I  N  P  D  T  S  K  N  Q  F  S  L  Q  L  N  S  V  T  P  E  D  T  A  V  Y  Y  C  A 

                                      -----------------CDR3-IMGT------------------>                                  
                                       R  D  S  D  L  W  R  G  S  T  P  K  F  D  Y  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_13796  272  AGAGATAGCGATTTGTGGAGAGGTTCTACCCCTAAGTTTGACTACTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  350
V  90.2% (248/275)  IGHV6-1*01   301  .....--------------------------------------------------------------------------  305
                                       R                                                                             
D  88.2% (15/17)    IGHD3-3*01   7    --------......T.....T....------------------------------------------------------  23
J  97.7% (42/43)    IGHJ4*02     6    ------------------------------------.....................A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36428895


Query= Query_37363

Length=324
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           321     6e-90
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	238	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E 
                    Query_13797  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*02  49   ...............................G..........AG...C.......G.............C...........G........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N 
                    Query_13797  91   TGGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*02  139  .......G....A...A.T.......G.G............C..C....................CA.......................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------CDR3-IMGT--------->   
                                       Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W 
                    Query_13797  181  CAGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGAGTCCCATGAAGCCTTGGATATCTGG  270
V  91.8% (225/245)  IGHV4-59*02  229  ...........G.A.................................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  90.0% (45/50)    IGHJ3*02     1    -----------------------------------------------------------------------...T..T..T.........  19

                                                                     
                                       G  P  G  T  M  V  T  V  S  S  
                    Query_13797  271  GGCCCAGGGACAATGGTCACCGTGTCTTCAG  301
J  90.0% (45/50)    IGHJ3*02     20   ....A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31360527


Query= Query_27402

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-3*01                                                                                            14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  C  W  I  R  Q  H  P  G  K  G 
                    Query_13798  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGTGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.2% (241/248)  IGHV4-31*03  49   ..................................C......C..................A..........C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13798  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.2% (241/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_13798  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.2% (241/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13798  271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_37365

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           366     2e-103
IGHD1-1*01                                                                                            12.2    32    
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAGA	AA	AACGAC	GTGTCCCCCGGGGAAC	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGAAGAAAAACGACGTGTCCCCCGGGGAACCTTTCACTAC	AEEKRRVPRGTFHY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	242	8	0	96.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  I  T  F  T  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13799  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGAATCACCTTTACCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.8% (242/250)  IGHV3-23*01  47   ................................T.........G..G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  G  G  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  K  D  N  S  
                    Query_13799  91   AGTGGGTCTCAGCCATTAGTGGTGGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAAAGACAATTCGA  180
V  96.8% (242/250)  IGHV3-23*01  137  .............T.........A......................................................G.........C.  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  E  E  K  R  R  V  P  R  
                    Query_13799  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGGAAGAAAAACGACGTGTCCCCCGGG  270
V  96.8% (242/250)  IGHV3-23*01  227  .................................................................A....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD1-1*01   12   ------------------------------------------------------------------------......------------  17

                                      ------------->                                  
                                      G  T  F  H  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13799  271  GAACCTTTCACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (43/44)    IGHJ4*02     5    ----....G.......................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_37364

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           322     2e-90
IGHD1-26*01                                                                                           18.0    0.56 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAC	TTCCCGTCATC	AGTGGGAGC	CGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAACTTCCCGTCATCAGTGGGAGCCGCGACTAC	AKLPVISGSRDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	6	1	0	85.7
Total	N/A	N/A	244	225	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  S  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13800  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAATTCCTACTGGAGTTGGATCCGGCAGCCCCCGGGGAAGGGACTGGAG  90
V  92.2% (225/244)  IGHV4-59*08  49   ...........................................G..A.........C.................A...............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  K 
                    Query_13800  91   TGGATCGGATATATCTATTCTAGTGGGAGCACCAATTACAACCCCTCCCTCAAGAGTCGCGTCACCATCTCGGTAGACACGTCCAAGAAG  180
V  92.2% (225/244)  IGHV4-59*08  139  .....T..G..........AC..............C.......................A........A..A.................C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  S  A  V  Y  Y  C  A  K  L  P  V  I  S  G  S  R  D 
                    Query_13800  181  CAGTTCTCCCTGAAACTGAATTCTGTGACCGCCGCAGACTCGGCCGTCTATTACTGTGCGAAACTTCCCGTCATCAGTGGGAGCCGCGAC  270
V  92.2% (225/244)  IGHV4-59*08  229  ..............G....GC..................A.......G.............G..--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD1-26*01  6    ---------------------------------------------------------------------------.........------  14
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  P  S  
                    Query_13800  271  TACTGGGGCCAGGGAACCCTGGTCACCGTCCCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   ..............................T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_37367

Length=396
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           386     2e-109
IGHD3-22*01                                                                                           18.0    0.68  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGACA	TGGGG	ATGATAGTGGCGGTT	TCCTTTAT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATGGGGATGATAGTGGCGGTTTCCTTTATTACTTCTGCGGTATGGACGTC	AGHGDDSGGFLYYFCGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	100	14	0	87.7
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	269	22	0	92.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  T  F  T  N  Y
                    Query_13801  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACACCTTTACAAACTA  90
V  92.4% (269/291)  IGHV5-51*01  6    .................................................................G...........G......C.G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  D  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  L  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_13801  91   CTGGATCGACTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCCTCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  92.4% (269/291)  IGHV5-51*01  96   ........G..............................................A....................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  L  E  G  Q  I  T  I  S  A  D  I  S  I  G  T  A  Y  L  Q  L  H  S  L  K  A  S  D  T  A
                    Query_13801  181  GTCCCTCGAAGGCCAAATCACCATCTCAGCCGACATCTCCATAGGCACCGCCTACCTGCAGTTGCACAGCCTGAAGGCCTCGGACACCGC  270
V  92.4% (269/291)  IGHV5-51*01  186  ....T..C.......GG..................AG.....CA..................G.AG........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        R  F  Y  G  A  G  H  G  D  D  S  G  G  F  L  Y  Y  F  C  G  M  D  V  W  G  Q  G  T  T  V
                    Query_13801  271  CAGGTTTTACGGTGCGGGACATGGGGATGATAGTGGCGGTTTCCTTTATTACTTCTGCGGTATGGACGTCTGGGGCCAAGGGACCACGGT  360
V  92.4% (269/291)  IGHV5-51*01  276  ..T..A....T.....A....---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  86.7% (13/15)    IGHD3-22*01  9    --------------------------........A.T....-------------------------------------------------  23
J  94.4% (51/54)    IGHJ6*02     9    -------------------------------------------------....A..A.................................  49

                                                   
                                        A  V  S  S 
                    Query_13801  361  CGCCGTCTCCTCA  373
J  94.4% (51/54)    IGHJ6*02     50   .A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38963079


Query= Query_37366

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           319     2e-89
IGHD1-1*01                                                                                            12.2    32   
IGHJ1*01                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD1-1*01	IGHJ1*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCCGGGAA	AACGAC	TGGGATCGTAGGTGGTCCGGTTTTCGCTT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCCGGGAAAACGACTGGGATCGTAGGTGGTCCGGTTTTCGCTTC	AGRENDWDRRWSGFRF	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	222	18	0	92.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  N  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13802  1    ACCCTGTCCCTCACCTGCACCGTCTCTGGTGGCTCCATCAGTAATTACTATTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  92.5% (222/240)  IGHV4-59*08  49   ....................T......................G......C.......................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       L  I  G  Y  L  Y  Y  G  G  S  A  N  Y  N  P  S  L  R  S  R  L  T  I  S  V  D  T  S  R  N 
                    Query_13802  91   TTGATTGGATATCTCTATTACGGTGGGAGCGCCAACTACAACCCCTCCCTCAGGAGTCGACTCACCATCTCAGTAGACACGTCGAGGAAC  180
V  92.5% (222/240)  IGHV4-59*08  139  .G......G...A........A........A.....................A.......G.......A..............C.A....  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  S  V  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  R  E  N  D  W  D  R  R  W 
                    Query_13802  181  CAGTTCTCCCTGAGCGTGAACTCTGTGACGGCCGCAGACACGGCCGTGTATTACTGTGCGGGCCGGGAAAACGACTGGGATCGTAGGTGG  270
V  92.5% (222/240)  IGHV4-59*08  229  .............AGC...G.........C..............................------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (6/6)     IGHD1-1*01   12   ---------------------------------------------------------------------......---------------  17

                                      -------------->                                
                                       S  G  F  R  F  W  G  P  G  T  L  V  T  V  S  S
                    Query_13802  271  TCCGGTTTTCGCTTCTGGGGCCCGGGGACCCTGGTCACCGTCTCCTC  317
J  93.9% (31/33)    IGHJ1*01     18   --------------........A...C....................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_328498

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           305     3e-85
IGHD3-10*02                                                                                           14.1    8.4  
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	N/A	CTATGTT	AAGGGGCTCTGATAG	TTTTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACTATGTTAAGGGGCTCTGATAGTTTTAATACT	ATMLRGSDSFNT	250	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	63	36	27	3	6	75
FR2-IMGT	64	114	51	49	2	0	96.1
CDR2-IMGT	115	135	21	18	3	0	85.7
FR3-IMGT	136	249	114	102	12	0	89.5
CDR3-IMGT (germline)	250	253	4	4	0	0	100
Total	N/A	N/A	253	226	21	6	89.3


Alignments

                                      <--------FR1-IMGT---------><-------------CDR1-IMGT------------><--------------------FR2-IM
                                       T  L  S  L  T  C  N  V  S  G  G  S  I  I  I  S  T  N  G  Y  Y  W  G  W  I  R  Q  P  P  G 
                    Query_13803  1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCATCATCATCAGTACAAATGGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGG  90
V  89.3% (226/253)  IGHV4-39*01  49   ...................C....................G..GT....------...................................  132
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S        S  Y  Y  W  G  W  I  R  Q  P  P  G 

                                      GT---------------------><-----CDR2-IMGT-----><--------------------------------------------
                                       K  G  L  E  W  I  G  T  I  S  H  S  G  T  T  Y  Y  K  A  S  L  K  S  R  V  T  I  S  V  D 
                    Query_13803  91   AAGGGACTGGAGTGGATTGGGACTATCTCTCATAGTGGGACCACCTACTACAAGGCGTCCCTCAAGAGTCGAGTCACCATATCCGTCGAC  180
V  89.3% (226/253)  IGHV4-39*01  133  .....G................G.....A.T.........G............CC...............................A...  222
                                       K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-------------CDR3-IM
                                       T  S  K  N  Q  F  S  L  R  V  T  S  V  T  A  A  D  T  A  M  F  Y  C  A  T  M  L  R  G  S 
                    Query_13803  181  ACGTCGAAAAATCAGTTCTCCCTGAGGGTGACCTCTGTGACCGCCGCAGACACGGCTATGTTTTATTGTGCGACTATGTTAAGGGGCTCT  270
V  89.3% (226/253)  IGHV4-39*01  223  .....C..G..C.............A.C...G.........................G...A...C.......-----------------  295
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                   
D  100.0% (7/7)     IGHD3-10*02  7    -------------------------------------------------------------------------.......----------  13

                                      GT------------>                                  
                                       D  S  F  N  T  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13803  271  GATAGTTTTAATACTTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  319
J  93.2% (41/44)    IGHJ3*02     7    -----....G...TC..................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_271438

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           321     7e-90
IGHD3-10*01                                                                                           12.2    33   
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	AGCCCGATCA	ACTTTGGTT	TCTTGGGACCACAGTCGGGATTG	TACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAAGCCCGATCAACTTTGGTTTCTTGGGACCACAGTCGGGATTGTACTCTGACTAC	ARSPINFGFLGPQSGLYSDY	238	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	23	1	0	95.8
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	224	19	0	92.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  L  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  K 
                    Query_13804  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCCTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGCCTGAAG  90
V  92.2% (224/243)  IGHV4-34*01  49   ....................................T..............................................G...G..  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  L  R  G  G  T  N  Y  H  P  S  L  K  S  R  A  S  I  S  T  D  A  S  K  N 
                    Query_13804  91   TGGATTGGGGAAATCAATCTTCGTGGAGGCACCAACTACCACCCGTCCCTCAAGAGTCGGGCCTCCATATCAACGGACGCGTCGAAGAAT  180
V  92.2% (224/243)  IGHV4-34*01  139  ...................A.A.....A...........A...................A.T.A........GTA...A....C.....C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------------CDR3-IM
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  S  P  I  N  F  G  F  L  G 
                    Query_13804  181  CAGTTCTCCCTGAAGCTGACGTCTGTGACCGCCGCGGACACGGCTGTATATTACTGTGCGAGAAGCCCGATCAACTTTGGTTTCTTGGGA  270
V  92.2% (224/243)  IGHV4-34*01  229  ...................GC..........................G...............---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  88.9% (8/9)      IGHD3-10*01  6    -------------------------------------------------------------------------...A.....--------  14

                                      GT------------------------>                                  
                                       P  Q  S  G  L  Y  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13804  271  CCACAGTCGGGATTGTACTCTGACTACTGGGGCCAGGGCACCCTGGTCACCGTCTCCTCAG  331
J  95.7% (44/46)    IGHJ4*02     3    ---------------....T..................A......................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_271439

Length=359
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43D*01                                                                                          313     2e-87
IGHD2-21*01                                                                                           14.1    8.8  
IGHJ6*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43D*01	IGHD2-21*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCTAA	GTCTCTACGTCGCTTA	GGTGATT	CTCCTCGACGATCAC	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCTAAGTCTCTACGTCGCTTAGGTGATTCTCCTCGACGATCACACGGTATGGACGGC	*VSTSLR*FSSTITRYGR	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	243	115	104	10	1	90.4
CDR3-IMGT (germline)	244	248	5	4	1	0	80
Total	N/A	N/A	248	226	21	1	91.1


Alignments

                                       <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  Y  W  V  R  Q  G  P  G  K  G  L  
                    Query_13805   1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTGATGATTACGCCATGTACTGGGTCCGTCAAGGTCCGGGGAAGGGTCTGG  90
V  91.1% (226/248)  IGHV3-43D*01  47   .................................................T......C...............C.................  136
                                          S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                       -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       E  W  V  S  L  I  S  W  D  A  T  T  A  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  K  R  
                    Query_13805   91   AGTGGGTCTCTCTTATTAGTTGGGATGCCACTACCGCATACTACGCAGACTCTGTGAAGGGTCGATTCACCATCTCCAGAGACAAGAGAA  180
V  91.1% (226/248)  IGHV3-43D*01  137  ...........................GTGG..G.A.C.....T.........................................C..-C  225
                                       E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                       -FR3-IMGT-----------------------------------------------------><-----------------------CDR
                                       K  K  L  P  V  F  A  N  E  Q  S  G  T  *  R  P  R  L  I  L  L  R  *  V  S  T  S  L  R  *  
                    Query_13805   181  AAAAACTCCCTGTATTTGCAAATGAACAGTCTGGGACCTGACGACCCCGCCTTATATTACTGCGCTAAGTCTCTACGTCGCTTAGGTGAT  270
V  91.1% (226/248)  IGHV3-43D*01  226  ...............C.................A..G....G...A.......G........T..A..----------------------  293
                                        K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A                         
D  100.0% (7/7)     IGHD2-21*01   14   ------------------------------------------------------------------------------------......  19

                                       3-IMGT----------------------->                                 
                                       F  S  S  T  I  T  R  Y  G  R  L  G  P  R  D  H  G  H  C  L  L  
                    Query_13805   271  TCTCCTCGACGATCACACGGTATGGACGGCTGGGGCCGAGGGACCACGGTCATTGTCTCCTCA  333
D  100.0% (7/7)     IGHD2-21*01   20   .--------------------------------------------------------------  20
J  91.5% (43/47)    IGHJ6*02      16   ----------------............T........A..............CC.........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35056212


Query= Query_271430

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*01                                                                                           291     5e-81
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*01	N/A	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	N/A	N/A	GCCGGCGGGCAGG	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCGGCGGGCAGGCAATTGGTTCGACCCC	ARGRRAGNWFDP	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	42	9	0	82.4
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	100	14	0	87.7
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	218	32	0	87.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  A  G  A  Y  Y  W  S  W  I  R  Q  Y  P  G  G  V 
                    Query_13806  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTGCTGGGGCTTACTACTGGAGTTGGATCCGCCAATACCCCGGGGGGGTC  90
V  87.2% (218/250)  IGHV4-31*01  49   .........................................CAG...T.G............C...........GC....A...AA..G.  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  Q  W  I  G  Y  I  Y  Y  G  E  R  T  Q  Y  N  P  S  L  K  N  L  L  T  I  S  G  D  T  S 
                    Query_13806  91   CTGCAGTGGATTGGATACATCTACTACGGTGAGAGAACCCAATACAATCCGTCCCTCAAGAATCTGCTGACCATATCAGGAGACACGTCT  180
V  87.2% (218/250)  IGHV4-31*01  139  ...G..........G........T...A...G...C...T.C.....C.............G...AG.T..........T..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  L  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       T  N  Q  F  S  L  S  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  A  G  N  W 
                    Query_13806  181  ACAAACCAGTTCTCCCTGAGCCTGAGGTCTGTGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGGCCGGCGGGCAGGCAATTGG  270
V  87.2% (218/250)  IGHV4-31*01  229  .AG................AG.....C..........................G................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  94.0% (47/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------...C...  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  I  L  V  T  V  T  S  
                    Query_13806  271  TTCGACCCCTGGGGCCAGGGAATCCTGGTCACCGTCACCTCAG  313
J  94.0% (47/50)    IGHJ5*02     9    ......................C.............T......  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_271431

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ6*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGCA	N/A	GTATTACTATGGTTC	TT	TGGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCAGTATTACTATGGTTCTTTGGACCTC	ARQYYYGSLDL	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	24	0	0	100
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	18	6	0	75
FR3-IMGT	170	283	114	106	8	0	93
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	270	21	0	92.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  R  G  F  G  Y  S  F  T  S  Y
                    Query_13807  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAGGGGTTTTGGATACAGCTTTACCAGCTA  90
V  92.8% (270/291)  IGHV5-51*01  6    ..............................................................A.....C.....................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  L  I  F  P  N  D  F  D  A  R  Y  S  P
                    Query_13807  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGTAAAGGCTTGGAGTGGATGGGCCTCATCTTTCCTAATGACTTCGATGCCAGATACAGTCC  180
V  92.8% (270/291)  IGHV5-51*01  96   ..............................G......C.............GA......A....GG.....CT...A..........C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  L  S  V  D  K  S  T  S  T  A  Y  L  E  W  S  S  L  K  A  S  D  P  A
                    Query_13807  181  GTCCTTCCAAGGCCAGGTCACCCTCTCAGTCGACAAGTCCACCAGCACCGCCTACCTGGAGTGGAGTAGCCTGAAGGCCTCGGACCCCGC  270
V  92.8% (270/291)  IGHV5-51*01  186  ......................A......C...........T................C.......C..................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                 
                                        I  Y  Y  C  A  R  Q  Y  Y  Y  G  S  L  D  L  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13807  271  CATTTATTACTGTGCGAGGCAGTATTACTATGGTTCTTTGGACCTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  349
V  92.8% (270/291)  IGHV5-51*01  276  ...G..............A..----------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                             
D  100.0% (15/15)   IGHD3-10*01  1    ---------------------...............-------------------------------------------  15
J  97.6% (40/41)    IGHJ6*02     22   --------------------------------------.....G...................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_271432

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           343     2e-96
IGHD2-21*01                                                                                           10.3    123  
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TTCATCCCCAATTGAGCAAA	CATAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATTCATCCCCAATTGAGCAAACATATTACTTCTTCTATGGCATGGACGTC	AKDSSPIEQTYYFFYGMDV	237	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	12	23	12	12	0	0	100
CDR1-IMGT	24	47	24	24	0	0	100
FR2-IMGT	48	98	51	49	2	0	96.1
CDR2-IMGT	99	122	24	22	2	0	91.7
FR3-IMGT	123	236	114	111	3	0	97.4
CDR3-IMGT (germline)	237	244	8	8	0	0	100
Total	N/A	N/A	233	226	7	0	97


Alignments

                                      <-FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><--
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  V  T  V  L 
                    Query_13808  12   TGTGCAGCCTCTGGATTCACCTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCCAGGGGCTGGAGTGGGTGACAGTTCTA  101
V  97.0% (226/233)  IGHV3-30*18  64   ...............................................................A.................G.....A..  153
                                       C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I 

                                      -----CDR2-IMGT------><----------------------------------------------------FR3-IMGT--------
                                       S  Y  D  G  S  D  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  V  Y  L 
                    Query_13808  102  TCATATGATGGAAGTGATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCAAGAACACAGTATATCTG  191
V  97.0% (226/233)  IGHV3-30*18  154  ...............A................................................................GC.G......  243
                                       S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L 

                                      --------------------------------------------><-----------------------CDR3-IMGT------------
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  S  S  P  I  E  Q  T  Y  Y  F  F  Y 
                    Query_13808  192  CAAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAAAGATTCATCCCCAATTGAGCAAACATATTACTTCTTCTAT  281
V  97.0% (226/233)  IGHV3-30*18  244  .....................................................-------------------------------------  296
                                       Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                        
D  100.0% (5/5)     IGHD2-21*01  3    -------------------------------------------------------------------------.....------------  7
J  93.0% (53/57)    IGHJ6*02     6    ------------------------------------------------------------------------------....A..A...C  17

                                      ----------->                                 
                                       G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13808  282  GGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  326
J  93.0% (53/57)    IGHJ6*02     18   ..T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_271433

Length=390
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD6-25*01                                                                                           14.1    9.6   
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-25*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	A	AGCAGCG	CTGGCAGGACCAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTC	ARQSSAGRTKYGMDV	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	68	6	0	91.9
CDR1-IMGT	76	99	24	17	7	0	70.8
FR2-IMGT	100	150	51	49	2	0	96.1
CDR2-IMGT	151	174	24	24	0	0	100
FR3-IMGT	175	288	114	106	8	0	93
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	295	272	23	0	92.2


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  L  K  K  P  G  E  S  L  K  I  S  C  R  S  S  G  Y  D  F  L  
                    Query_13809  2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGCTAAAGAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAGGAGTTCTGGGTACGACTTTCTCG  91
V  92.2% (272/295)  IGHV5-51*01  2    .............................G.G..A.....C.........................A.G.......A...AG....AC.A  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      D  Y  W  I  V  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  
                    Query_13809  92   ACTACTGGATCGTCTGGGTGCGCCAAATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACA  181
V  92.2% (272/295)  IGHV5-51*01  92   G...........G............G..........................................................G.....  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  K  A  S  D  
                    Query_13809  182  GTCCGTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGTACCGCCTACCTGCAGTGGCGCAGTCTGAAGGCCTCGGACA  271
V  92.2% (272/295)  IGHV5-51*01  182  .C...............................C...............C..................A....C................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                      T  A  K  Y  Y  R  A  R  Q  S  S  A  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  
                    Query_13809  272  CCGCCAAGTATTACCGTGCGAGACAAAGCAGCGCTGGCAGGACCAAATACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCT  361
V  92.2% (272/295)  IGHV5-51*01  272  ......T.......T..........-----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (7/7)     IGHD6-25*01  7    --------------------------.......---------------------------------------------------------  13
J  100.0% (48/48)   IGHJ6*02     15   -----------------------------------------------...........................................  57

                                           
                                      S  S 
                    Query_13809  362  CCTCA  366
J  100.0% (48/48)   IGHJ6*02     58   .....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38329533


Query= Query_271434

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           349     2e-98
IGHD2-2*01                                                                                            27.6    8e-04
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAACT	TATTGTACTAGTACCACCTG	TTCTAAT	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAACTTATTGTACTAGTACCACCTGTTCTAATTACGACGGTATGGACGTC	ARGTYCTSTTCSNYDGMDV	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  T  Y  A  V  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13810  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTACTTATGCCGTGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  95.1% (235/247)  IGHV3-33*01  47   .............................................GC....G.A...............................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  Y  Y  D  G  S  N  K  Y  Y  A  G  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13810  91   AGTGGGTGGCATTCATATACTATGATGGAAGTAATAAATACTATGCAGGCTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.1% (235/247)  IGHV3-33*01  137  ...........G.T....GG............................A.........................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  N  T  L  Y  L  Q  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  G  T  Y  C  T  S  T  
                    Query_13810  181  AGAACACGCTGTATCTGCAAATGAGCAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGCGAGGGGAACTTATTGTACTAGTACCA  270
V  95.1% (235/247)  IGHV3-33*01  227  ........................A...........................G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  90.0% (18/20)    IGHD2-2*01   5    --------------------------------------------------------------------------.......G........  20

                                      -IMGT----------------------->                                 
                                      T  C  S  N  Y  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13810  271  CCTGTTCTAATTACGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  332
D  90.0% (18/20)    IGHD2-2*01   21   G...----------------------------------------------------------  24
J  98.0% (50/51)    IGHJ6*02     12   -----------...T...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_271435

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           335     4e-94
IGHD3-9*01                                                                                            14.1    8.3  
IGHJ2*01                                                                                              98.7    6e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-9*01	IGHJ2*01	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GTACGC	TTTTGAC	GGCA	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGTACGCTTTTGACGGCAACTGGTACTTCGATCTC	RESTLLTATGTSIS	242	283	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	28	29	28	0	1	96.6
CDR1-IMGT	29	52	24	23	1	0	95.8
FR2-IMGT	53	103	51	49	2	0	96.1
CDR2-IMGT	104	127	24	20	4	0	83.3
FR3-IMGT	128	241	114	107	7	0	93.9
CDR3-IMGT (germline)	242	249	8	7	1	0	87.5
Total	N/A	N/A	250	234	15	1	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  S   S  P  V  Q  P  L  D  S  P  L  A  A  M  P  *  A  G  S  V  R  L  Q  G  R  G  W 
                    Query_13811  1    GGTCCCTGAG-CTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCCATGCCATGAGCTGGGTCCGTCAGGCTCCAGGGAAGGGGCTGG  89
V  93.6% (234/250)  IGHV3-23*01  47   ..........A....................................T...................C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                       S  G  F  Q  L  L  L  L  L  V  V  A  H  T  T  Q  T  P  *  R  A  G  S  P  S  P  E  T  I  P 
                    Query_13811  90   AGTGGGTTTCAGCTATTACTACTACTGGTGGTAGCACACACTACGCAGACTCCGTGAAGGGCCGGTTCACCGTCTCCAGAGACAATTCCA  179
V  93.6% (234/250)  IGHV3-23*01  137  .......C..........G.GG..G.............T................................A..................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                       R  T  R  C  L  W  K  *  T  A  *  E  P  T  T  R  P  Y  I  T  V  R  E  S  T  L  L  T  A  T 
                    Query_13811  180  AGAACACGTTGTCTATGGAAATGAACAGCCTGAGAGCCGACGACACGGCCGTATATTACTGTGCGAGAGAGTACGCTTTTGACGGCAACT  269
V  93.6% (234/250)  IGHV3-23*01  227  ........C...A.C..C......................G.........................A...--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (7/7)     IGHD3-9*01   12   ----------------------------------------------------------------------------.......-------  18
J  100.0% (51/51)   IGHJ2*01     3    ---------------------------------------------------------------------------------------...  5

                                      ------------->                                  
                                       G  T  S  I  S  G  A  V  A  P  W  S  L  S  P  Q 
                    Query_13811  270  GGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  317
J  100.0% (51/51)   IGHJ2*01     6    ................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_271436

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           308     4e-86
IGHD4-17*01                                                                                           21.8    0.039
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GCGTAGGG	ACGGTGACTAC	GGGGCGGGCCTTGAGCAT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGCGTAGGGACGGTGACTACGGGGCGGGCCTTGAGCAT	ARERRDGDYGAGLEH	230	274	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	16	4	4	0	0	100
CDR1-IMGT	17	40	24	20	4	0	83.3
FR2-IMGT	41	91	51	50	1	0	98
CDR2-IMGT	92	115	24	24	0	0	100
FR3-IMGT	116	229	114	105	9	0	92.1
CDR3-IMGT (germline)	230	237	8	8	0	0	100
Total	N/A	N/A	225	211	14	0	93.8


Alignments

                                      <FR><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><-------CDR
                                        S  G  F  T  L  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  V  I  W  Y  D
                    Query_13812  13   GTCTGGATTCACCTTAAGTTCCTATGCCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGTCAGTTATATGGTATGA  102
V  93.8% (211/225)  IGHV3-33*01  72   ...............C...AG.....G..............................................G................  161
                                        S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  W  Y  D

                                      2-IMGT------><----------------------------------------------------FR3-IMGT----------------
                                        G  S  N  K  Y  Y  A  D  A  V  K  G  R  F  A  I  S  R  D  E  S  K  N  T  M  H  L  Q  M  S
                    Query_13812  103  TGGAAGTAATAAATACTATGCAGACGCCGTGAAGGGCCGATTCGCCATCTCCAGAGACGAATCCAAGAACACGATGCATCTGCAAATGAG  192
V  93.8% (211/225)  IGHV3-33*01  162  .........................T.................A..............A.T............C..T............A  251
                                        G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  Q  M  N

                                      ------------------------------------><-----------------CDR3-IMGT----------------->        
                                        S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  E  R  R  D  G  D  Y  G  A  G  L  E  H  W  G  Q
                    Query_13812  193  CAGCCTGAGAGCCGAGGACACGGCTCTTTATTACTGTGCGAGAGAGCGTAGGGACGGTGACTACGGGGCGGGCCTTGAGCATTGGGGCCA  282
V  93.8% (211/225)  IGHV3-33*01  252  .........................G.G.................---------------------------------------------  296
                                        S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                                                
D  100.0% (11/11)   IGHD4-17*01  6    -----------------------------------------------------...........--------------------------  16
J  100.0% (34/34)   IGHJ4*02     15   ----------------------------------------------------------------------------------........  22

                                                                
                                        G  T  L  V  T  V  S  S  
                    Query_13812  283  GGGAACCCTGGTCACCGTCTCCTCAG  308
J  100.0% (34/34)   IGHJ4*02     23   ..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_99933

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           355     3e-100
IGHD2-15*01                                                                                           21.8    0.041 
IGHJ3*01                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GGAC	TAGTGGTGGGAGCT	ACAGTTGGGA	TTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGGACTAGTGGTGGGAGCTACAGTTGGGATTTTGATCTC	AKGTSGGSYSWDFDL	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	112	2	0	98.2
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	238	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  E  F  T  F  S  S  Y  S  M  S  W  V  R  H  A  P  G  K  G  L  
                    Query_13813  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGAATTTACCTTTAGTAGCTATAGCATGAGTTGGGTCCGCCACGCTCCAGGGAAGGGGCTGG  90
V  95.6% (238/249)  IGHV3-23*01  47   ..............................G...C........C......GC......C...........G...................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  V  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13813  91   AGTGGGTCTCAGCTATTGTTGGTAGTGGTGGTAGCACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  95.6% (238/249)  IGHV3-23*01  137  .................AG.......................................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  T  S  G  G  S  Y  
                    Query_13813  181  AGAACACGCTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTTTATTACTGTGCGAAAGGGACTAGTGGTGGGAGCTACA  270
V  95.6% (238/249)  IGHV3-23*01  227  .................C..................................A................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  92.9% (13/14)    IGHD2-15*01  10   -------------------------------------------------------------------------.........T....---  23

                                      ---------------->                                  
                                      S  W  D  F  D  L  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13813  271  GTTGGGATTTTGATCTCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  321
J  97.7% (43/44)    IGHJ3*01     7    -------.......G....................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_183474

Length=404
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-46*01                                                                                           419     2e-119
IGHD3-10*01                                                                                           23.8    0.013 
IGHJ6*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-46*01	IGHD3-10*01	IGHJ6*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTTAGAA	GGTTCGGGGAGT	CACGACTCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTTAGAAGGTTCGGGGAGTCACGACTCTTACTACTACGCTATGGACGTC	ARDPLEGSGSHDSYYYAMDV	289	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	75	75	71	4	0	94.7
CDR1-IMGT	76	99	24	23	1	0	95.8
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	22	2	0	91.7
FR3-IMGT	175	288	114	108	6	0	94.7
CDR3-IMGT (germline)	289	296	8	8	0	0	100
Total	N/A	N/A	296	282	14	0	95.3


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  *  V  K  V  S  C  K  A  S  G  Y  T  F  T 
                    Query_13814  1    CAGGTCCAGCTTGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTAAGTGAAGGTTTCCTGCAAGGCATCTGGATACACCTTCACC  90
V  95.3% (282/296)  IGHV1-46*01  1    .....G.....G...........G.........................C........................................  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       R  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  A  I  I  N  P  S  G  G  T  T  K  Y 
                    Query_13814  91   AGGTACTATATGCACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGCAATAATCAATCCTAGTGGTGGTACCACAAAATAC  180
V  95.3% (282/296)  IGHV1-46*01  91   ..C....................................................G.........C.............G.....GC...  180
                                       S  Y  Y  M  H  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  I  I  N  P  S  G  G  S  T  S  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  D  L  T  S  L  R  S  E  D 
                    Query_13814  181  GCACAGAAGTTCCAGGGCAGAGTCACCATGACCAGGGACACGTCCACGAGCACAGTCTACATGGACCTGACCAGCCTGAGATCTGAGGAC  270
V  95.3% (282/296)  IGHV1-46*01  181  .................................................................G....G...................  270
                                       A  Q  K  F  Q  G  R  V  T  M  T  R  D  T  S  T  S  T  V  Y  M  E  L  S  S  L  R  S  E  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  I  Y  Y  C  A  R  D  P  L  E  G  S  G  S  H  D  S  Y  Y  Y  A  M  D  V  W  G  Q  G 
                    Query_13814  271  ACGGCCATCTATTACTGTGCGAGAGATCCTTTAGAAGGTTCGGGGAGTCACGACTCTTACTACTACGCTATGGACGTCTGGGGCCAAGGG  360
V  95.3% (282/296)  IGHV1-46*01  271  ......G.G.................----------------------------------------------------------------  296
                                       T  A  V  Y  Y  C  A  R                                                                   
D  100.0% (12/12)   IGHD3-10*01  11   ------------------------------------............------------------------------------------  22
J  98.1% (53/54)    IGHJ6*02     9    ---------------------------------------------------------..........G......................  41

                                                           
                                       T  T  V  T  V  S  S 
                    Query_13814  361  ACCACGGTCACCGTCTCCTCA  381
J  98.1% (53/54)    IGHJ6*02     42   .....................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39552192


Query= Query_183475

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           313     2e-87
IGHD5-18*01                                                                                           16.1    2.3  
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TA	GATACAGTTAT	ATGCCAATTATTCCCGAGAAT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGATAGATACAGTTATATGCCAATTATTCCCGAGAATTGGTTCGACCTC	ARDRYSYMPIIPENWFDL	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	101	13	0	88.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  W  M  H  W  V  R  Q  V  P  G  K  G  L  
                    Query_13815  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACATTCAGTAGACACTGGATGCACTGGGTCCGCCAAGTTCCAGGGAAGGGCCTGG  90
V  90.0% (225/250)  IGHV3-74*01  47   .....................................C........CT........................C............G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  S  R  I  N  I  D  G  S  K  T  V  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13815  91   CGTGGGTCTCACGCATAAATATAGATGGGAGTAAGACAGTCTACGCGGACTCCGTGAAGGGCCGCTTCACCATCTCAAGAGACAACGCCA  180
V  90.0% (225/250)  IGHV3-74*01  137  T............T..T....GT..........GC...AG........................A...........C.............  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  D  L  Q  M  T  K  V  T  A  E  D  T  A  V  Y  Y  C  A  R  D  R  Y  S  Y  M  P  
                    Query_13815  181  AGAACACGCTGGATCTACAAATGACCAAGGTGACAGCCGAGGACACGGCTGTCTACTACTGTGCAAGAGATAGATACAGTTATATGCCAA  270
V  90.0% (225/250)  IGHV3-74*01  227  ...........T....G.......A..GTC...G..................G..T..............--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.9% (10/11)    IGHD5-18*01  4    ------------------------------------------------------------------------.......C...-------  14

                                      IMGT--------------------->                                  
                                      I  I  P  E  N  W  F  D  L  W  G  Q  G  A  L  V  I  V  S  S  
                    Query_13815  271  TTATTCCCGAGAATTGGTTCGACCTCTGGGGCCAGGGAGCCCTGGTCATCGTCTCCTCAG  330
J  93.5% (43/46)    IGHJ5*02     6    --------------..........C.............A.........C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_183476

Length=411
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           361     5e-102
IGHD2-2*02                                                                                            33.4    2e-05 
IGHJ5*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD2-2*02	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCAAGGCC	ATATTGTAGTAGCACCGGGTGCTATA	GGGGTCGT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCAAGGCCATATTGTAGTAGCACCGGGTGCTATAGGGGTCGTTGGTTCGACCCC	ARDSRPYCSSTGCYRGRWFDP	290	352	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	9	76	68	65	3	0	95.6
CDR1-IMGT	77	100	24	19	5	0	79.2
FR2-IMGT	101	151	51	48	3	0	94.1
CDR2-IMGT	152	175	24	18	6	0	75
FR3-IMGT	176	289	114	102	12	0	89.5
CDR3-IMGT (germline)	290	297	8	8	0	0	100
Total	N/A	N/A	289	260	29	0	90


Alignments

                                      <-----------------------------FR1-IMGT-----------------------------><-------CDR1-IMGT-----
                                         L  V  Q  S  G  A  E  V  K  K  S  G  A  S  V  K  I  S  C  E  A  S  G  Y  S  F  T  T  H  
                    Query_13816  9    AGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGTCTGGGGCCTCAGTGAAGATCTCCTGCGAGGCTTCTGGTTATAGTTTTACCACCCACG  98
V  90.0% (260/289)  IGHV1-18*04  8    ................................C.................G........A.............C.CC.......G.T...  97
                                         L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y  

                                      -><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------------
                                      G  I  N  W  V  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  N  I  H  D  G  Y  T  K  Y  A  Q  
                    Query_13816  99   GTATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCCTGAGTGGATGGGGTGGATCAACATTCACGATGGTTACACAAAGTATGCACAGA  188
V  90.0% (260/289)  IGHV1-18*04  98   ......G.............................T............A.......G.GC.T..A.....A.......C..........  187
                                      G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q  

                                      ----------------------------------------FR3-IMGT------------------------------------------
                                      I  V  Q  D  R  V  T  L  T  R  D  T  S  T  S  T  A  Y  M  D  L  R  R  L  R  S  D  D  T  A  
                    Query_13816  189  TTGTCCAAGACAGAGTCACCTTGACCAGAGACACATCCACGAGCACAGCCTACATGGACCTGAGGAGGCTGAGATCAGACGACACGGCCG  278
V  90.0% (260/289)  IGHV1-18*04  188  AGC....G.G..........A......C..............................G........C........T.............  277
                                      K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A  

                                      ----------><--------------------------CDR3-IMGT-------------------------->                
                                      V  Y  Y  C  A  R  D  S  R  P  Y  C  S  S  T  G  C  Y  R  G  R  W  F  D  P  W  G  Q  G  T  
                    Query_13816  279  TGTATTATTGTGCGAGAGATTCAAGGCCATATTGTAGTAGCACCGGGTGCTATAGGGGTCGTTGGTTCGACCCCTGGGGCCAGGGAACCC  368
V  90.0% (260/289)  IGHV1-18*04  278  .......C...........-----------------------------------------------------------------------  296
                                      V  Y  Y  C  A  R                                                                          
D  88.5% (23/26)    IGHD2-2*02   4    ----------------------------............T...A.C.......------------------------------------  29
J  97.8% (45/46)    IGHJ5*02     6    --------------------------------------------------------------............................  33

                                                        
                                      L  V  I  V  S  S  
                    Query_13816  369  TGGTCATCGTCTCCTCAG  386
J  97.8% (45/46)    IGHJ5*02     34   ......C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40288536


Query= Query_183477

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           350     8e-99
IGHD5-12*01                                                                                           14.1    8.4  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCCCCTCGGGA	TGGCTAC	AATCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGAGATTCCCCTCGGGATGGCTACAATCCTTTTGACTAC	VRDSPRDGYNPFDY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	6	2	0	75
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  M  F  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13817  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCATGTTCAGTAGATATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-33*01  47   ....................................CC........C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  S  D  G  S  Y  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13817  91   AGTGGGTGGCAGTTATATGGTCTGATGGAAGTTATAAATACTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (237/250)  IGHV3-33*01  137  .....................A..........A.........................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  K  L  Y  L  E  M  S  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  S  P  R  D  G  Y  
                    Query_13817  181  AGAACAAGTTATATCTGGAAATGAGCAGCCTGAGAGCCGAGGACACGGCTGTATATTACTGTGTCAGAGATTCCCCTCGGGATGGCTACA  270
V  94.8% (237/250)  IGHV3-33*01  227  ......C.C.G......C......A...........................G..........CG.....--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD5-12*01  11   ----------------------------------------------------------------------------------.......-  17

                                      ------------->                                  
                                      N  P  F  D  Y  W  G  Q  G  I  L  V  P  V  S  S  
                    Query_13817  271  ATCCTTTTGACTACTGGGGCCAGGGAATCCTGGTCCCCGTCTCCTCAG  318
J  95.3% (41/43)    IGHJ4*02     6    -----......................C.......A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_183470

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           380     1e-107
IGHD5-12*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTC	TATAGTGGCTAC	CAGAAAGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTCTATAGTGGCTACCAGAAAGTTTTTGACTCT	ARFYSGYQKVFDS	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  P  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  K  F  S  S  Y
                    Query_13818  1    GCAGCTGGTGCAGTCTGGACCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAAGTTTTCCAGTTA  90
V  92.0% (266/289)  IGHV5-51*01  6    ...................G.........................................A...G...........GC...A....C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  V  A  I  I  Y  P  A  D  S  T  T  R  Y  S  P
                    Query_13818  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGGTGGCAATCATCTATCCTGCTGACTCTACTACCCGATACAGTCC  180
V  92.0% (266/289)  IGHV5-51*01  96   ..............................................A...GG.............G.......GA....A.......C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  L  Q  G  Q  V  T  I  S  A  D  K  S  T  S  T  A  F  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13818  181  GTCCCTCCAAGGGCAGGTCACCATCTCAGCCGACAAGTCCACCAGTACCGCCTTCCTGCAGTGGAGTAGCCTGAAGGCCTCGGACACCGC  270
V  92.0% (266/289)  IGHV5-51*01  186  ....T.......C............................T...C.......A............C.......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        T  F  Y  C  A  R  F  Y  S  G  Y  Q  K  V  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13818  271  CACGTTTTACTGTGCGAGATTCTATAGTGGCTACCAGAAAGTTTTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  92.0% (266/289)  IGHV5-51*01  276  ..T..A.............-------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                    
D  100.0% (12/12)   IGHD5-12*01  6    ----------------------............----------------------------------------------------  17
J  95.3% (41/43)    IGHJ4*02     6    -------------------------------------------.......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_183471

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           274     7e-76
IGHD2-2*01                                                                                            12.2    31   
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TCAGC	ACCAGC	GCAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGTCAGCACCAGCGCATACTACTTTGACTTC	ARVSTSAYYFDF	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	100	14	0	87.7
CDR3-IMGT (germline)	240	246	7	6	1	0	85.7
Total	N/A	N/A	243	209	34	0	86


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  P  I  S  G  Y  Q  W  S  W  L  R  Q  P  P  G  K  G  L  E  
                    Query_13819  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCCCCATCAGTGGTTACCAGTGGAGCTGGCTCCGACAACCCCCAGGAAAGGGACTGGAGT  93
V  86.0% (209/243)  IGHV4-59*01  50   .....TCC...A....................T........A.....T.C.........A....G..G........G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  D  M  Y  Y  S  G  T  S  N  Y  N  P  S  L  R  N  R  V  T  M  S  F  D  T  S  K  R  
                    Query_13819  94   GGATTGCCGATATGTATTACAGTGGCACCAGCAATTACAACCCCTCCCTCAGGAATCGAGTCACCATGTCCTTTGACACGTCCAAGAGGC  183
V  86.0% (209/243)  IGHV4-59*01  140  ......GGT....C...........G.G..C...C................A..G............A..AG.A.............AC.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  L  R  L  E  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  T  S  A  Y  Y  F  D  
                    Query_13819  184  AGTTCTCCCTGAGGCTGGAGTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGAGTCAGCACCAGCGCATACTACTTTGACT  273
V  86.0% (209/243)  IGHV4-59*01  230  ............A....AGC..........................G............A...---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (6/6)     IGHD2-2*01   17   --------------------------------------------------------------------......----------------  22
J  91.3% (42/46)    IGHJ4*02     1    ------------------------------------------------------------------------------............  12

                                      ->                                
                                      F  W  G  R  G  T  L  V  V  V  S  S
                    Query_13819  274  TCTGGGGCCGGGGAACCCTGGTCGTCGTCTCCTC  307
J  91.3% (42/46)    IGHJ4*02     13   A........A.............AC.........  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_183478

Length=373
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         391     6e-111
IGHD6-19*01                                                                                           18.0    0.64  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	CCACGGCTAC	AGCAGTGGC	GC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GGGAGCCACGGCTACAGCAGTGGCGCTGACTAC	GSHGYSSGADY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	288	5	4	1	0	80
Total	N/A	N/A	288	269	19	0	93.4


Alignments

                                        <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  V  S  E  F  S  F  T  N  F
                    Query_13820    1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGTTTCTGAATTCAGCTTTACCAACTT  90
V  93.4% (269/288)  IGHV5-10-1*01  6    .................................................................G.....G..A...........G..A  95
                                          Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                        ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                          W  I  T  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  D  Y  S  P
                    Query_13820    91   CTGGATCACCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAGGATTGATCCTAGTGACTCTTATACCGACTACAGCCC  180
V  93.4% (269/288)  IGHV5-10-1*01  96   ........G..........................................G...........................A..........  185
                                          W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  S  P

                                        ------------------------------------------FR3-IMGT----------------------------------------
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  M  W  S  S  L  R  A  S  D  S  A
                    Query_13820    181  GTCCTTCCAAGGCCACGTCACCATCTCAGCTGACAAGTCCATCACAACTGCCTACCTAATGTGGAGCAGCCTGCGGGCCTCGGACAGCGC  270
V  93.4% (269/288)  IGHV5-10-1*01  186  ............................................GC...........GCA.............AA...........C...  275
                                          S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                        ------------><-----------CDR3-IMGT----------->                                  
                                          I  Y  Y  C  G  S  H  G  Y  S  S  G  A  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_13820    271  CATTTATTATTGTGGGAGCCACGGCTACAGCAGTGGCGCTGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  350
V  93.4% (269/288)  IGHV5-10-1*01  276  ...G.....C....C...--------------------------------------------------------------  293
                                          M  Y  Y  C  A                                                                 
D  100.0% (9/9)     IGHD6-19*01    7    ----------------------------.........-------------------------------------------  15
J  97.6% (40/41)    IGHJ4*02       8    ---------------------------------------..............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36534486


Query= Query_183479

Length=321
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*03                                                                                            355     3e-100
IGHD3-16*01                                                                                           18.0    0.54  
IGHJ4*02                                                                                              62.2    6e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	GGGT	CGTTTGGGG	CG	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGGGGTCGTTTGGGGCGC	SRGRLGR	243	263	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	237	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13821  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGTAGCTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (237/247)  IGHV3-7*03   47   .........................................................G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  I  I  N  Q  D  G  S  E  A  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13821  91   AGTGGGTGGCCATCATAAACCAAGATGGAAGTGAGGCATACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGGGACAACGCCA  180
V  96.0% (237/247)  IGHV3-7*03   137  ............A......G...............AA..........................................A..........  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->       
                                      K  N  S  L  Y  L  E  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  S  R  G  R  L  G  R  W  G  
                    Query_13821  181  AGAACTCTCTGTATCTGGAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTGTATTACTGTTCGAGGGGTCGTTTGGGGCGCTGGGGCC  270
V  96.0% (237/247)  IGHV3-7*03   227  .......A.........C................................G...........G....-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (9/9)     IGHD3-16*01  13   -----------------------------------------------------------------------.........----------  21
J  97.1% (34/35)    IGHJ4*02     14   ----------------------------------------------------------------------------------........  21

                                                                 
                                      Q  G  T  L  V  T  V  S  T  
                    Query_13821  271  AGGGAACCCTGGTCACCGTCTCCACAG  297
J  97.1% (34/35)    IGHJ4*02     22   .......................T...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31043754


Query= Query_200355

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           346     2e-97
IGHD2-8*01                                                                                            12.2    31   
IGHJ4*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-8*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAAAG	GTATCC	CTAATG	CCACCTTCA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGGTATCCCTAATGCCACCTTCAACTTTGACTAC	AKGIPNATFNFDY	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	114	0	0	100
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  T  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_13822  1    GGTCCCTGAGACTCTCCTGTGCAGCATCTGGATTCACCTTTACCACCTATGCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-23*01  47   .........................C................G..G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      D  W  V  S  V  I  G  V  S  D  T  K  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13822  91   ACTGGGTCTCAGTAATTGGTGTTAGTGATACTAAGACATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  94.4% (235/249)  IGHV3-23*01  137  .G..........CT...A...G.....G.GG..GC.......................................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  G  I  P  N  A  T  F  
                    Query_13822  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAAGGTATCCCTAATGCCACCTTCA  270
V  94.4% (235/249)  IGHV3-23*01  227  .....................................................................---------------------  295
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (6/6)     IGHD2-8*01   12   ---------------------------------------------------------------------------......---------  17

                                      ---------->                                  
                                      N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13822  271  ACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  315
J  100.0% (45/45)   IGHJ4*02     4    .............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_200357

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           291     6e-81
IGHD3-10*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGCTGGAGGGGGC	TTCGGGACGTTACTATAA	TGGACGGCGGGGGATTCC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGCTGGAGGGGGCTTCGGGACGTTACTATAATGGACGGCGGGGGATTCCGGACGTC	ARLEGASGRYYNGRRGIPDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	216	30	0	87.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  N  S  H  Y  W  V  W  I  R  Q  S  P  V  K  G 
                    Query_13823  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCACCAATAGTCACTACTGGGTCTGGATCCGCCAGTCCCCAGTGAAGGGG  90
V  87.8% (216/246)  IGHV4-39*01  49   ...........................................GT.G....T.........G.............C......G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  V  F  Y  S  G  T  T  S  Y  N  P  S  L  R  G  R  V  T  I  S  V  G  P  S 
                    Query_13823  91   CTGGAGTGGATTGGGACCGTCTTTTATAGCGGGACCACCTCCTACAACCCGTCCCTCAGGGGTCGAGTCACCATCTCCGTTGGCCCGTCC  180
V  87.8% (216/246)  IGHV4-39*01  139  ................GTA...A......T....G.....A.................A.A.............A.....A.A.A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       N  N  Q  F  S  L  E  V  R  S  V  T  A  A  D  T  S  I  Y  Y  C  A  R  L  E  G  A  S  G  R 
                    Query_13823  181  AACAACCAATTCTCCCTGGAGGTGAGGTCTGTGACCGCCGCGGACACCTCTATTTATTACTGTGCGCGGCTGGAGGGGGCTTCGGGACGT  270
V  87.8% (216/246)  IGHV4-39*01  229  ..G.....G.........A..C....C..............A.....GG..G.G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  83.3% (15/18)    IGHD3-10*01  13   --------------------------------------------------------------------------------......GA..  22

                                      DR3-IMGT------------------------>                                 
                                       Y  Y  N  G  R  R  G  I  P  D  V  W  G  Q  G  T  T  V  T  V  A  S 
                    Query_13823  271  TACTATAATGGACGGCGGGGGATTCCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCGCCTCA  336
D  83.3% (15/18)    IGHD3-10*01  23   ..T.....----------------------------------------------------------  30
J  97.5% (39/40)    IGHJ6*02     23   --------------------------..................................T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_200356

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           364     5e-103
IGHD6-19*01                                                                                           16.1    2.2   
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTAGTGG	GTGGCTGG	C	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGAGAGGTAGTGGGTGGCTGGCTGACTTC	TRGSGWLADF	261	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	48	3	0	94.1
CDR2-IMGT	126	146	21	20	1	0	95.2
FR3-IMGT	147	260	114	107	7	0	93.9
CDR3-IMGT (germline)	261	267	7	6	1	0	85.7
Total	N/A	N/A	267	250	17	0	93.6


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  D  S  D  Y  W  S  W  L  R  
                    Query_13824  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACTTGCACTGTCTCTGGTGGCTCCATCGATAGTGACTACTGGAGCTGGCTCCGGC  90
V  93.6% (250/267)  IGHV4-59*01  26   ................T....................C........................AG....T..............A......  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  L  I  D  Y  S  G  S  T  N  Y  N  P  S  L  Q  S  R  V  T  
                    Query_13824  91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTTAATCGATTACAGTGGGAGCACCAACTACAACCCCTCCCTCCAGAGTCGAGTCACCA  180
V  93.6% (250/267)  IGHV4-59*01  116  .................................AT...T...................................A...............  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  T  R  G  
                    Query_13824  181  TATCAGTGGACACGTCCAAGAATCAGTTCTCCCTGAAGCTGAACTCTGTGACCGCTGCGGACACGGCCGTCTACTATTGTACGAGAGGTA  270
V  93.6% (250/267)  IGHV4-59*01  206  .......A..............C...................G...........................G..T..C...G......---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -CDR3-IMGT--------->                                  
                                      S  G  W  L  A  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13824  271  GTGGGTGGCTGGCTGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  324
D  100.0% (8/8)     IGHD6-19*01  11   ----........------------------------------------------  18
J  97.6% (40/41)    IGHJ4*02     8    -------------.....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_200350

Length=334
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           369     2e-104
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	242	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_13825  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.6% (242/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13825  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.6% (242/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_13825  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.6% (242/248)  IGHV4-31*03  229  ....................................................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13825  271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32416437


Query= Query_200353

Length=405
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD3-3*01                                                                                            29.5    2e-04 
IGHJ6*02                                                                                              64.1    2e-14 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GTCCTG	TACGATTTTTGGAATGGT	CAGCAGTACTTTTTCAAGGGTTTA	GACGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCTGTACGATTTTTGGAATGGTCAGCAGTACTTTTTCAAGGGTTTAGACGTC	ARVLYDFWNGQQYFFKGLDV	290	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	76	75	72	3	0	96
CDR1-IMGT	77	100	24	20	4	0	83.3
FR2-IMGT	101	151	51	47	4	0	92.2
CDR2-IMGT	152	175	24	23	1	0	95.8
FR3-IMGT	176	289	114	105	9	0	92.1
CDR3-IMGT (germline)	290	295	6	6	0	0	100
Total	N/A	N/A	294	273	21	0	92.9


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><-------CDR1-IM
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  R  F  A 
                    Query_13826  2    GAGGTCCAGCTGGTACAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAGGATCTCCTGTAAGGGTTCTGGATACAGGTTTGCC  91
V  92.9% (273/294)  IGHV5-51*01  1    .....G........G........................................A...........................C...A..  90
                                       E  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T 

                                      GT------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----
                                       N  S  W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y 
                    Query_13826  92   AACTCCTGGATCGCCTGGGTGCGCCAGATGCCCGGAAAAGGCCTGGAGTGGATGGGCGTCATCTACCCTGGTGACTCTGATACCAGATAC  181
V  92.9% (273/294)  IGHV5-51*01  91   .G..A........G.....................G....................GA.......T........................  180
                                       S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y 

                                      -----------------------------------------------FR3-IMGT-----------------------------------
                                       G  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  G  L  R  A  S  D 
                    Query_13826  182  GGCCCGTCCTTCCAGGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTATCTTCACTGGAGCGGCCTGAGGGCCTCGGAC  271
V  92.9% (273/294)  IGHV5-51*01  181  A.............A..................................G.........C..G..G......A......A..........  270
                                       S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D 

                                      -----------------><-------------------------CDR3-IMGT------------------------>            
                                       T  A  M  Y  F  C  A  R  V  L  Y  D  F  W  N  G  Q  Q  Y  F  F  K  G  L  D  V  W  G  Q  G 
                    Query_13826  272  ACCGCCATGTATTTCTGTGCGAGAGTCCTGTACGATTTTTGGAATGGTCAGCAGTACTTTTTCAAGGGTTTAGACGTCTGGGGCCAAGGG  361
V  92.9% (273/294)  IGHV5-51*01  271  .............A..........------------------------------------------------------------------  294
                                       T  A  M  Y  Y  C  A  R                                                                   
D  94.4% (17/18)    IGHD3-3*01   5    ------------------------------.............G....------------------------------------------  22
J  94.9% (37/39)    IGHJ6*02     24   ------------------------------------------------------------------------..................  41

                                                           
                                       T  S  V  T  V  S  S 
                    Query_13826  362  ACTTCGGTCACCGTCTCCTCA  382
J  94.9% (37/39)    IGHJ6*02     42   ..CA.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39657384


Query= Query_200352

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHD3-9*01                                                                                            12.2    31    
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGA	ATATTT	CCCACGAGG	CTTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTAAGAGACGAATATTTCCCACGAGGCTTTCAGTAC	VRDEYFPRGFQY	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  G  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13827  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGGCTACTGGATGCACTGGGTCCGCCAAGCACCAGGGAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-74*01  47   ............................................A............................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  N  S  D  G  S  I  I  D  S  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13827  91   TGTGGGTCTCACGTATTAATAGTGATGGGAGTATCATAGACTCCGCGGATTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (240/250)  IGHV3-74*01  137  .................................G..C.AG..A......C........................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  V  R  D  E  Y  F  P  R  G  
                    Query_13827  181  AGAACACACTGTATCTGCAAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGTAAGAGACGAATATTTCCCACGAGGCT  270
V  96.0% (240/250)  IGHV3-74*01  227  .......G.......................................................C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-9*01   9    -------------------------------------------------------------------------......-----------  14
J  95.5% (42/44)    IGHJ4*02     5    ----------------------------------------------------------------------------------------..  6

                                      ------->                                  
                                      F  Q  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13827  271  TTCAGTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  95.5% (42/44)    IGHJ4*02     7    ..G.C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_322908

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           269     2e-74
IGHD3-9*01                                                                                            16.1    2.2  
IGHJ6*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCGA	TATTACGGTAT	GACTCCTATA	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCGATATTACGGTATGACTCCTATAACGGTATGGACGTC	ARDSILRYDSYNGMDV	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	19	7	0	73.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	96	18	0	84.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	208	36	0	85.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  S  S  M  T  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_13828  4    CCCTGAGACTCTCCTGTTCGGTCTCTGGTAGCTCCATGACTAGTTACTACTGGAGTTGGATCCGGCAGCCCCCCGGAAAGGGACTGGAGT  93
V  85.2% (208/244)  IGHV4-59*01  50   .....TCC...A....CA.T.........G.......C.G...............C.................A..G.............  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  T  G  I  S  K  Y  N  P  S  L  K  S  R  A  T  V  S  M  D  T  S  K  N  
                    Query_13828  94   GGATTGGCTATATCTATTACACTGGGATAAGCAAGTACAATCCCTCCCTCAAGAGTCGAGCCACCGTATCGATGGACACCTCCAAGAATC  183
V  85.2% (208/244)  IGHV4-59*01  140  .......G.............G.....GC.C...C.....C...................T....A....AG.A.....G........C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  F  F  L  N  V  N  S  V  T  S  A  D  T  A  V  Y  F  C  A  R  D  S  I  L  R  Y  D  S  Y  
                    Query_13828  184  AATTCTTCCTGAACGTCAACTCTGTGACCTCTGCGGACACGGCCGTATATTTCTGTGCGAGAGATTCGATATTACGGTATGACTCCTATA  273
V  85.2% (208/244)  IGHV4-59*01  230  .G....C......GC.G.G..........G................G....A............--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  90.9% (10/11)    IGHD3-9*01   2    ---------------------------------------------------------------------.......A...----------  12

                                      ------------->                                 
                                      N  G  M  D  V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_13828  274  ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  320
J  97.9% (46/47)    IGHJ6*02     16   ....................................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_200359

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           291     6e-81
IGHD3-10*01                                                                                           18.0    0.62 
IGHJ6*02                                                                                              71.8    9e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGCTGGAGGGGGC	TTCGGGACGTTACTATAA	TGGACGGCGGGGGATTCC	GGACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGCTGGAGGGGGCTTCGGGACGTTACTATAATGGACGGCGGGGGATTCCGGACGTC	ARLEGASGRYYNGRRGIPDV	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	46	5	0	90.2
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	97	17	0	85.1
CDR3-IMGT (germline)	244	246	3	3	0	0	100
Total	N/A	N/A	246	216	30	0	87.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  T  N  S  H  Y  W  V  W  I  R  Q  S  P  V  K  G 
                    Query_13829  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCACCAATAGTCACTACTGGGTCTGGATCCGCCAGTCCCCAGTGAAGGGG  90
V  87.8% (216/246)  IGHV4-39*01  49   ...........................................GT.G....T.........G.............C......G.......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  T  V  F  Y  S  G  T  T  S  Y  N  P  S  L  R  G  R  V  T  I  S  V  G  P  S 
                    Query_13829  91   CTGGAGTGGATTGGGACCGTCTTTTATAGCGGGACCACCTCCTACAACCCGTCCCTCAGGGGTCGAGTCACCATCTCCGTTGGCCCGTCC  180
V  87.8% (216/246)  IGHV4-39*01  139  ................GTA...A......T....G.....A.................A.A.............A.....A.A.A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       N  N  Q  F  S  L  E  V  R  S  V  T  A  A  D  T  S  I  Y  Y  C  A  R  L  E  G  A  S  G  R 
                    Query_13829  181  AACAACCAATTCTCCCTGGAGGTGAGGTCTGTGACCGCCGCGGACACCTCTATTTATTACTGTGCGCGGCTGGAGGGGGCTTCGGGACGT  270
V  87.8% (216/246)  IGHV4-39*01  229  ..G.....G.........A..C....C..............A.....GG..G.G............------------------------  294
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  83.3% (15/18)    IGHD3-10*01  13   --------------------------------------------------------------------------------......GA..  22

                                      DR3-IMGT------------------------>                                 
                                       Y  Y  N  G  R  R  G  I  P  D  V  W  G  Q  G  T  T  V  T  V  A  S 
                    Query_13829  271  TACTATAATGGACGGCGGGGGATTCCGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCGCCTCA  336
D  83.3% (15/18)    IGHD3-10*01  23   ..T.....----------------------------------------------------------  30
J  97.5% (39/40)    IGHJ6*02     23   --------------------------..................................T.....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_269698

Length=368
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           313     2e-87
IGHD6-19*01                                                                                           19.9    0.17 
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	GACTGTTAAACCCAAA	CAGTGGCTGG	GGGGACGGTTCTACTCTCG	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGAGACTGTTAAACCCAAACAGTGGCTGGGGGGACGGTTCTACTCTCGCTACGGTATGGACGTC	AKETVKPKQWLGGRFYSRYGMDV	243	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	225	25	0	90


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  E  A  T  F  S  S  Y  A  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_13830  1    GGTCCCTGAGACTCTCCTGTGAAGGCTCTGAAGCCACCTTTAGTAGCTATGCCATGACGTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.0% (225/250)  IGHV3-23*01  47   .....................C..C.....G.TT.........C.............GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  S  R  N  G  G  T  A  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13830  91   AGTGGGTCTCGGCTATTAGTCGCAATGGTGGCACTGCATACTACGCAGACTCCGTGAAGGGCCGATTCACCATTTCCAGAGACAATTCCA  180
V  90.0% (225/250)  IGHV3-23*01  137  ..........A.........G.T.G......T.GCA............................G........C................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      M  N  T  V  F  L  H  M  S  S  L  R  P  E  D  T  A  I  Y  Y  C  A  K  E  T  V  K  P  K  Q  
                    Query_13830  181  TGAACACGGTGTTTCTGCACATGAGCAGCCTGAGACCCGAGGACACGGCCATATATTACTGTGCGAAAGAGACTGTTAAACCCAAACAGT  270
V  90.0% (225/250)  IGHV3-23*01  227  A.......C...A......A....A..........G..............G...................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD6-19*01  9    --------------------------------------------------------------------------------------....  12

                                      --CDR3-IMGT----------------------------->                             
                                      W  L  G  G  R  F  Y  S  R  Y  G  M  D  V  R  G  Q  G  T  T  V  A  V  S
                    Query_13830  271  GGCTGGGGGGACGGTTCTACTCTCGCTACGGTATGGACGTCAGGGGCCAAGGGACCACGGTCGCCGTCTC  340
D  100.0% (10/10)   IGHD6-19*01  13   ......----------------------------------------------------------------  18
J  95.6% (43/45)    IGHJ6*02     14   -------------------------................T....................A.......  58


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36006531


Query= Query_114064

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           399     3e-113
IGHD7-27*01                                                                                           19.9    0.17  
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGC	AGTCCTTTTA	CTAACTGGGG	N/A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAGTCCTTTTACTAACTGGGGTTGACTTT	AVLLLTGVDF	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	285	2	2	0	0	100
Total	N/A	N/A	285	270	15	0	94.7


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  G  S  G  Y  S  F  T  N  Y
                    Query_13831  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACAGCTTTACCAACTA  90
V  94.7% (270/285)  IGHV5-51*03  6    .............................................................A........................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        F  I  G  W  V  R  Q  R  P  G  E  G  L  E  W  M  G  L  I  Y  P  G  D  S  D  T  R  Y  N  S
                    Query_13831  91   CTTCATCGGCTGGGTGCGCCAGAGGCCCGGGGAAGGCCTGGAGTGGATGGGGCTCATTTATCCTGGTGACTCTGATACCAGGTACAACTC  180
V  94.7% (270/285)  IGHV5-51*03  96   ..GG...................T.......A....................A....C.......................A....G.C.  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13831  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACTTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  94.7% (270/285)  IGHV5-51*03  186  ...............G............................G..........C..................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                  
                                        I  Y  Y  C  A  V  L  L  L  T  G  V  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13831  271  CATTTATTACTGTGCAGTCCTTTTACTAACTGGGGTTGACTTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  347
V  94.7% (270/285)  IGHV5-51*03  276  ...G...........--------------------------------------------------------------  290
                                        M  Y  Y  C  A                                                              
D  100.0% (10/10)   IGHD7-27*01  1    -------------------------..........------------------------------------------  10
J  95.2% (40/42)    IGHJ4*02     7    -----------------------------------......AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_135935

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           349     2e-98
IGHD3-22*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCGAG	CGCA	GATAGGAGTGGTTATTACT	TAGAATTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGCGCAGATAGGAGTGGTTATTACTTAGAATTT	SSADRSGYYLEF	243	278	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	247	5	4	1	0	80
Total	N/A	N/A	247	235	12	0	95.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  S  F  G  M  H  W  V  R  L  A  P  G  K  G  L  
                    Query_13832  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTCAGTAGCTTTGGCATGCACTGGGTCCGCCTGGCTCCAGGCAAGGGGCTGG  90
V  95.1% (235/247)  IGHV3-30*03  47   ....................................C...........A....................A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  N  N  E  Y  Y  A  D  A  V  K  G  R  F  T  I  F  R  D  N  S  
                    Query_13832  91   AGTGGGTGGCAGTTATATCATATGATGGAAATAATGAATATTATGCAGACGCCGTGAAGGGCCGATTCACCATCTTCAGAGACAATTCCA  180
V  95.1% (235/247)  IGHV3-30*03  137  ..............................G....A....C.........T........................C..............  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT-----
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  S  S  A  D  R  S  G  Y  Y  
                    Query_13832  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAAGACACGGCTGTGTATTACTGTTCGAGCGCAGATAGGAGTGGTTATTACT  270
V  95.1% (235/247)  IGHV3-30*03  227  ....................................CT..G.....................G....-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.7% (18/19)    IGHD3-22*01  11   -----------------------------------------------------------------------.....T.............  29

                                      ------->                                  
                                      L  E  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13832  271  TAGAATTTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  312
J  100.0% (34/34)   IGHJ4*02     15   --------..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_171639

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           297     7e-83
IGHD1-26*01                                                                                           12.2    31   
IGHJ6*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GGCTCCCGGAGACCA	GTATAATGG	C	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAGAGGCTCCCGGAGACCAGTATAATGGCATGGACGTC	VREAPGDQYNGMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	26	3	0	89.7
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	220	30	0	88


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  V  G  S  G  F  R  F  R  S  Y  G  M  Y  W  V  R  Q  A  P  G  K  G  L  
                    Query_13833  1    GGTCCCTGAGACTCTCCTGTGTAGGTTCTGGATTCAGGTTCAGAAGTTATGGCATGTACTGGGTCCGTCAGGCTCCAGGCAAGGGGCTGG  90
V  88.0% (220/250)  IGHV3-30*03  47   .....................C..CC..........CC.....T..C.........C..........C......................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  L  Y  D  G  S  K  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13833  91   AGTGGGTGTCAGTCATATTATATGATGGAAGTAAAAAATATTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACTCCA  180
V  88.0% (220/250)  IGHV3-30*03  137  ........G....T....C...............T.....C...........C................................T....  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  D  M  N  T  L  G  P  E  D  T  A  T  Y  Y  C  V  R  E  A  P  G  D  Q  Y  
                    Query_13833  181  AGAATACACTATATCTAGACATGAACACCCTAGGACCTGAGGACACGGCTACATATTACTGTGTGAGAGAGGCTCCCGGAGACCAGTATA  270
V  88.0% (220/250)  IGHV3-30*03  227  ....C..G..G.....GC.A.......G...GA..G..............GTG..........C......--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (8/9)      IGHD1-26*01  2    -------------------------------------------------------------------------------------.....  6

                                      ------------->                                 
                                      N  G  M  D  V  W  G  Q  G  T  A  V  I  V  S  S 
                    Query_13833  271  ATGGCATGGACGTCTGGGGCCAGGGGACCGCGGTCATCGTCTCGTCA  317
D  88.9% (8/9)      IGHD1-26*01  7    G...-------------------------------------------  10
J  90.5% (38/42)    IGHJ6*02     21   -----.................A......A......C......C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_62938

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            339     2e-95
IGHD1-26*01                                                                                           18.0    0.60 
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD1-26*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTAACAGTTTGTTGGCACCTG	AGTGGGAGC	CTGA	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTAACAGTTTGTTGGCACCTGAGTGGGAGCCTGATGATGCTTTTGATATC	ARVNSLLAPEWEPDDAFDI	241	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	54	27	23	4	0	85.2
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	18	3	0	85.7
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	232	15	0	93.9


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  A  S  I  S  S  R  S  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_13834  1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGCCTCCATCAGCAGCAGAAGCTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  93.9% (232/247)  IGHV4-4*02   49   ...............................G............T..T.A........................................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  N  T  N  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  K  S  K 
                    Query_13834  91   GAGTGGATTGGGGAGATCTATCATGGTGGGAATACCAACTACAACCCGTCCCTCAAGAGTCGACTTACTATATCAGTAGACAAGTCCAAG  180
V  93.9% (232/247)  IGHV4-4*02   139  ..............A.........A......GC..............................G.C..C.....................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------------------CDR3-I
                                       N  Q  F  S  L  Q  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  N  S  L  L  A  P  E 
                    Query_13834  181  AACCAATTCTCCCTGCAGCTGAGGTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGAGAGTTAACAGTTTGTTGGCACCTGAG  270
V  93.9% (232/247)  IGHV4-4*02   229  .....G.........A.......C..........................G................-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (9/9)     IGHD1-26*01  6    ----------------------------------------------------------------------------------------..  7

                                      MGT----------------------->                                  
                                       W  E  P  D  D  A  F  D  I  W  G  Q  G  T  L  A  I  V  S  S  
                    Query_13834  271  TGGGAGCCTGATGATGCTTTTGATATCTGGGGCCAAGGGACATTGGCCATCGTCTCTTCAG  331
D  100.0% (9/9)     IGHD1-26*01  8    .......------------------------------------------------------  14
J  94.0% (47/50)    IGHJ3*02     1    -----------...............................A...T..C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_171632

Length=389
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           425     3e-121
IGHD3-22*01                                                                                           37.2    1e-06 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	GGGGTCGC	GATAGTAGTGGTTATTACT	GG	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGGGGTCGCGATAGTAGTGGTTATTACTGGGGTATGGACGTC	ARRGRDSSGYYWGMDV	284	331	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	281	9	0	96.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  E  G  S  G  Y  S  F  T  N  Y
                    Query_13835  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTGAGGGTTCTGGATACAGCTTTACCAACTA  90
V  96.9% (281/290)  IGHV5-51*01  6    .............................................................A........................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  L  G  D  S  E  T  R  Y  S  P
                    Query_13835  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATTATCTATCTTGGTGACTCTGAAACCAGATACAGCCC  180
V  96.9% (281/290)  IGHV5-51*01  96   ........G.............................................C.......C............T..............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  G  D  N  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13835  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGGCGACAACTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.9% (281/290)  IGHV5-51*01  186  .............................C......G.....................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------------CDR3-IMGT------------------>                             
                                        I  Y  Y  C  A  R  R  G  R  D  S  S  G  Y  Y  W  G  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_13835  271  CATCTATTACTGTGCGAGACGGGGTCGCGATAGTAGTGGTTATTACTGGGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTC  360
V  96.9% (281/290)  IGHV5-51*01  276  ...G................----------------------------------------------------------------------  295
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (19/19)   IGHD3-22*01  11   ----------------------------...................-------------------------------------------  29
J  100.0% (45/45)   IGHJ6*02     18   -------------------------------------------------.........................................  58

                                          
                                        S 
                    Query_13835  361  CTCA  364
J  100.0% (45/45)   IGHJ6*02     59   ....  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38223942


Query= Query_171631

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           375     3e-106
IGHD2-2*01                                                                                            10.3    134   
IGHJ4*01                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-2*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CCCAAATTTCTTGGGTTC	CCAGC	CA	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACACCCAAATTTCTTGGGTTCCCAGCCATTTGACTCC	ARHPNFLGSQPFDS	283	324	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	69	69	67	2	0	97.1
CDR1-IMGT	70	93	24	19	5	0	79.2
FR2-IMGT	94	144	51	49	2	0	96.1
CDR2-IMGT	145	168	24	18	6	0	75
FR3-IMGT	169	282	114	105	9	0	92.1
CDR3-IMGT (germline)	283	290	8	7	1	0	87.5
Total	N/A	N/A	290	265	25	0	91.4


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  H  S  F  I  G  H 
                    Query_13836  1    CAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCCGGACACAGTTTTATCGGCCAC  90
V  91.4% (265/290)  IGHV5-51*01  7    ...................................C................................T...T....C....C.A..T..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  M  I  Y  F  D  D  S  D  T  R  Y  S  P 
                    Query_13836  91   TGGATCGGCTGGGTGCGCCAGATGCCCGGAAAAGGCCTGGAGTGGATGGGGATGATATATTTTGACGACTCTGATACAAGATACAGTCCG  180
V  91.4% (265/290)  IGHV5-51*01  97   .............................G.......................C..C...CC..GT...........C........C...  186
                                       W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  V  Y  L  Q  W  S  S  L  R  A  S  D  T  A 
                    Query_13836  181  TCCTTCGAGGGCCAGGTCACCATCTCCGCCGACAAGTCCATCAGTACCGTCTACCTGCAGTGGAGCAGCCTGAGGGCCTCGGACACTGCC  270
V  91.4% (265/290)  IGHV5-51*01  187  ......C.A.................A.................C....C.......................A............C...  276
                                       S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       M  Y  F  C  A  R  H  P  N  F  L  G  S  Q  P  F  D  S  W  G  H  G  T  L  V  T  V  S  S  
                    Query_13836  271  ATGTATTTCTGTGCCAGACACCCAAATTTCTTGGGTTCCCAGCCATTTGACTCCTGGGGCCACGGAACCCTGGTCACCGTCTCCTCAG  358
V  91.4% (265/290)  IGHV5-51*01  277  .......A......G.....--------------------------------------------------------------------  296
                                       M  Y  Y  C  A  R                                                                       
D  100.0% (5/5)     IGHD2-2*01   18   --------------------------------------.....---------------------------------------------  22
J  95.3% (41/43)    IGHJ4*01     6    ---------------------------------------------.......A.........A.........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_171635

Length=318
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           315     5e-88
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCAAG	N/A	N/A	GGCAGGTCCTTTT	TGGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGGGCAGGTCCTTTT	ARAGPF	243	260	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	18	6	0	75
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	224	23	0	90.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  S  F  S  S  T  L  M  H  W  F  R  Q  A  P  G  K  G  L  
                    Query_13837  1    GGTCCCTGAGACTCTCCTGTGCAGTCTCAGGATTCAGCTTCAGTAGTACTTTGATGCACTGGTTCCGCCAAGCTCCAGGGAAGGGACTGG  90
V  90.7% (224/247)  IGHV3-74*01  47   ........................C...T.......C.........CTAC.G..........G......................G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      A  W  V  A  R  I  E  S  D  G  S  T  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13837  91   CGTGGGTCGCACGCATAGAAAGTGATGGCAGTACCACAAACTACGCGGACTCCGTGAAGGGTCGATTCACCATCTCCAGAGACAACGCCA  180
V  90.7% (224/247)  IGHV3-74*01  137  T.......T....T..TA.T........G....G.....G.....................C............................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----CDR3-IMGT--->          
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  G  E  D  T  A  V  Y  Y  C  A  R  A  G  P  F  W  G  Q  
                    Query_13837  181  AGAACACGCTGTATCTGCAGATGAACAGTCTGAGAGGCGAGGACACGGCTGTATATTACTGTGCAAGGGCAGGTCCTTTTTGGGGCCAGG  270
V  90.7% (224/247)  IGHV3-74*01  227  ...................A................C...............G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
J  100.0% (32/32)   IGHJ4*02     15   --------------------------------------------------------------------------------..........  24

                                                            
                                      G  T  L  V  T  V  S  S
                    Query_13837  271  GAACCCTGGTCACCGTCTCCTC  292
J  100.0% (32/32)   IGHJ4*02     25   ......................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 30726981


Query= Query_171634

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-3*01                                                                                            357     1e-100
IGHD2-2*01                                                                                            14.1    9.8   
IGHJ5*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-3*01	IGHD2-2*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGAGCCCCAA	TAGTCCCAGC	GCTGATATACAGACC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGAGCCCCAATAGTCCCAGCGCTGATATACAGACCCAACTGGTTCGCCCCC	ARERAPIVPALIYRPNWFAP	284	343	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	15	9	0	62.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	103	11	0	90.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	259	31	0	89.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  S  G  A  S  V  K  V  S  C  K  A  S  G  Y  R  F  D  S  H 
                    Query_13838  2    CAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGTCTGGGGCCTCAGTGAAGGTTTCCTGCAAGGCTTCTGGCTACAGGTTCGATAGTCAT  91
V  89.3% (259/290)  IGHV1-3*01   7    .....T...........................C.....................................A....CC...AC...CT..  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  H  W  L  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  N  V  A  D  G  Y  T  R  Y  S  Q 
                    Query_13838  92   GGCATCCATTGGCTGCGCCAGGCCCCCGGACAAGGGCTTGAGTGGATGGGCTGGATCAACGTTGCCGATGGTTACACGAGATATTCACAG  181
V  89.3% (259/290)  IGHV1-3*01   97   .CT..G......G....................A................A..........C..G.A.....A....A.A..........  186
                                       A  M  H  W  V  R  Q  A  P  G  Q  R  L  E  W  M  G  W  I  N  A  G  N  G  N  T  K  Y  S  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  F  V  E  L  R  S  L  R  S  E  D  T  A 
                    Query_13838  182  AGGTTCCAAGGGAGAGTCACCATTACCAGAGACACATCCGCGAGCACAGCTTTCGTGGAACTGAGGAGCCTGAGATCTGAAGACACGGCT  271
V  89.3% (259/290)  IGHV1-3*01   187  .A......G..C.................G....................C.A.A....G.....C........................  276
                                       K  F  Q  G  R  V  T  I  T  R  D  T  S  A  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A 

                                      -----------><-------------------------CDR3-IMGT------------------------>                  
                                       V  Y  Y  C  A  R  E  R  A  P  I  V  P  A  L  I  Y  R  P  N  W  F  A  P  W  G  Q  G  A  L 
                    Query_13838  272  GTCTATTACTGTGCGAGAGAAAGAGCCCCAATAGTCCCAGCGCTGATATACAGACCCAACTGGTTCGCCCCCTGGGGCCAGGGAGCCCTG  361
V  89.3% (259/290)  IGHV1-3*01   277  ..G.................----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  90.0% (9/10)     IGHD2-2*01   13   -------------------------------....A.....-------------------------------------------------  22
J  95.8% (46/48)    IGHJ5*02     2    --------------------------------------------------------...........A................A.....  35

                                                    
                                       V  T  V  S  S
                    Query_13838  362  GTCACCGTCTCCTC  375
J  95.8% (46/48)    IGHJ5*02     36   ..............  49


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_36018

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           300     8e-84
IGHD3-3*01                                                                                            18.0    0.59 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTCAA	GGAGTTCC	AGTAGTTATTAT	GTCGGGTTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGGAGTTCCAGTAGTTATTATGTCGGGTTGGACTACTTTGAAAAC	SRSSSSYYVGLDYFEN	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	24	18	3	3	75
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	243	4	3	1	0	75
Total	N/A	N/A	246	221	22	3	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  S  F  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13839  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCGATGACTATAGTTTCCACTGGGTCCGTCAAGCTCCGGGGAAGGGTCTGG  90
V  89.8% (221/246)  IGHV3-43*01  47   .....................................C..T.....T....CCA.G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  G  W  D  G     T  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13839  91   AGTGGGTCTCTTTCATTGGTTGGGATGGG---ACCACAGACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCG  177
V  89.8% (221/246)  IGHV3-43*01  137  ...........C.T...A..........TGGT.G....T..................................................A  226
                                      E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      D  N  S  L  F  L  Q  M  T  G  L  R  I  E  D  T  A  L  Y  Y  C  S  R  S  S  S  S  Y  Y  V  
                    Query_13839  178  ACAACTCCCTCTTTCTGCAAATGACTGGTCTGAGAATTGAGGACACCGCCTTGTATTACTGTTCAAGGAGTTCCAGTAGTTATTATGTCG  267
V  89.8% (221/246)  IGHV3-43*01  227  .A........G.A...........ACA.........C.........................G...------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A                          
D  91.7% (11/12)    IGHD3-3*01   17   --------------------------------------------------------------------------...G........----  28

                                      T------------------>                                  
                                      G  L  D  Y  F  E  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13839  268  GGTTGGACTACTTTGAAAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  95.8% (46/48)    IGHJ4*02     1    ------..........CT....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_135938

Length=381
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           380     1e-107
IGHD3-16*01                                                                                           14.1    9.3   
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GACAAGCGGGCGGCACC	TTTGGGG	CGAGC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTAC	ARGQAGGTFGASDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	67	2	0	97.1
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	289	266	23	0	92


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  M  K  V  S  C  K  A  S  G  Y  S  F  N  D  Y 
                    Query_13840  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAATGAAGGTCTCCTGCAAGGCTTCCGGTTACAGCTTTAACGACTAT  91
V  92.0% (266/289)  IGHV1-18*01  7    .............................................G......................T.......C.....C.AG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  T  W  M  R  Q  A  P  G  Q  G  P  E  W  M  G  W  I  S  A  Y  N  G  N  T  K  Y  S  E 
                    Query_13840  92   GGTATCACTTGGATGCGACAGGCCCCTGGACAGGGGCCTGAGTGGATGGGATGGATCAGCGCATATAATGGTAACACAAAGTATTCAGAG  181
V  92.0% (266/289)  IGHV1-18*01  97   .......GC...G...................A....T........................T..C..............C...G..C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       R  L  Q  G  R  L  I  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_13840  182  AGGCTCCAGGGCAGACTCATCATGACCACAGACACATCCACGAGCACAGCCTACATGGAATTGAGGAGCCTGAGATCTGACGACACGGCC  271
V  92.0% (266/289)  IGHV1-18*01  187  .A.............G...C.......................................GC.............................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><----------------CDR3-IMGT--------------->                                  
                                       V  Y  Y  C  A  R  G  Q  A  G  G  T  F  G  A  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13840  272  GTCTATTATTGTGCGAGAGGACAAGCGGGCGGCACCTTTGGGGCGAGCGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  359
V  92.0% (266/289)  IGHV1-18*01  277  ..G.....C..........---------------------------------------------------------------------  295
                                       V  Y  Y  C  A  R                                                                       
D  100.0% (7/7)     IGHD3-16*01  15   ------------------------------------.......---------------------------------------------  21
J  100.0% (40/40)   IGHJ4*02     9    ------------------------------------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37379214


Query= Query_11779

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            391     6e-111
IGHD6-6*01                                                                                            16.1    2.4   
IGHJ4*02                                                                                              71.8    9e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGCTGAGGAAC	CAGCTCGT	ATCC	GACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTC	ARALRNQLVSDF	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	270	20	0	93.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  S  F  S  S  Y
                    Query_13841  1    GCAGCTGGTGCAGTCTGGGGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACAGCTTCAGCAGCTA  90
V  93.1% (270/290)  IGHV1-8*02   6    .............................................................................C.....C......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  T  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_13841  91   TGATATCACCTGGGTGCGACAGGCCACTGGACAAGGGCTTGAGTGGATGGGATGGATGAACCCTAATAGTGGTAACACGGGCTATGCACA  180
V  93.1% (270/290)  IGHV1-8*02   96   ........A.........................................................C...........A...........  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  K  G  R  V  I  T  T  G  D  I  T  M  S  T  A  Y  M  E  M  S  S  L  N  A  E  D  T  A
                    Query_13841  181  GAAGTTCAAGGGCAGAGTCATCACGACCGGGGACATCACCATGAGCACAGCCTACATGGAGATGAGCAGCCTCAACGCTGAAGACACGGC  270
V  93.1% (270/290)  IGHV1-8*02   186  .......C............C..T....A..A...C.T....A..................C..........G.GAT....G........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        V  Y  Y  C  A  R  A  L  R  N  Q  L  V  S  D  F  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13841  271  CGTATATTACTGTGCGAGAGCGCTGAGGAACCAGCTCGTATCCGACTTCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.1% (270/290)  IGHV1-8*02   276  ...G................---------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                 
D  100.0% (8/8)     IGHD6-6*01   9    -------------------------------........--------------------------------------------  16
J  97.5% (39/40)    IGHJ4*02     9    -------------------------------------------....A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_96818

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           327     8e-92
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	N/A	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	TGGACTTCAGTC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATGGACTTCAGTCCTTTGACTAC	ARDGLQSFDY	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	23	7	0	76.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	230	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  G  V  G  Y  L  W  S  W  I  R  Q  Q  P  G  K  G 
                    Query_13842  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATAAGTGGTGTTGGTTATCTCTGGAGCTGGATCCGCCAGCAGCCAGGGAAGGGC  90
V  91.6% (230/251)  IGHV4-31*03  49   ..................A...................C..CA...G......CTA.....................C............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  V  G  Y  I  F  H  T  G  S  T  Y  Y  N  P  S  L  R  S  R  V  T  I  S  L  E  T  S 
                    Query_13842  91   CTGGAGTGGGTTGGGTACATCTTTCACACTGGGAGCACCTACTACAACCCGTCCCTCAGGAGTCGAGTCACCATTTCACTAGAGACGTCT  180
V  91.6% (230/251)  IGHV4-31*03  139  .........A............A.T...G.............................A.........T.....A...G....C......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       K  N  Q  F  S  L  R  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  G  L  Q  S  F  D 
                    Query_13842  181  AAAAACCAGTTCTCCCTGAGGCTGAACTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGATGGACTTCAGTCCTTTGAC  270
V  91.6% (230/251)  IGHV4-31*03  229  ..G................A.....G.............................................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
J  100.0% (44/44)   IGHJ4*02     5    -----------------------------------------------------------------------------------.......  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13842  271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  100.0% (44/44)   IGHJ4*02     12   .....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_96819

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*02                                                                                            330     1e-92
IGHD3-16*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCAGCCTGATCGGGACAG	TGCTTAT	N/A	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCAGCCTGATCGGGACAGTGCTTATTAC	ASQPDRDSAYY	241	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	50	1	0	98
CDR2-IMGT	106	126	21	19	2	0	90.5
FR3-IMGT	127	240	114	107	7	0	93.9
CDR3-IMGT (germline)	241	245	5	5	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  I  S  G  V  S  F  S  R  N  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_13843  1    ACCCTGTCCCTCACCTGCGCTATATCTGGTGTCTCCTTCAGTAGAAATAACTGGTGGAGTTGGGTCCGCCAGCCCCCAGGGAAGGGACTG  90
V  93.1% (228/245)  IGHV4-4*02   49   .....................G.C.......G....A....C..T.G.......................................G...  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  S  D  S  G  S  T  N  Y  N  E  S  L  K  S  R  V  T  I  S  I  D  K  S  K 
                    Query_13843  91   GAGTGGATTGGGGAAATCTCTGATAGTGGGAGCACCAACTACAACGAGTCTCTCAAGAGTCGAGTCACCATATCAATAGACAAGTCCAAG  180
V  93.1% (228/245)  IGHV4-4*02   139  ...................A.C.......................CC...C........................G..............  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><-----------CDR3-IMGT---------
                                       N  Q  F  S  L  H  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  S  Q  P  D  R  D  S  A  Y 
                    Query_13843  181  AACCAATTCTCCCTGCATCTGAGCTCTGTGACCGCCGCGGACACGGCCGTGTATTACTGTGCGAGCCAGCCTGATCGGGACAGTGCTTAT  270
V  93.1% (228/245)  IGHV4-4*02   229  .....G.........A.G...............................................-------------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                            
D  100.0% (7/7)     IGHD3-16*01  28   -----------------------------------------------------------------------------------.......  34

                                      -->                                  
                                       Y  W  G  Q  G  T  L  A  T  V  S  S  
                    Query_13843  271  TACTGGGGCCAGGGAACCCTGGCCACCGTCTCCTCAG  307
J  97.3% (36/37)    IGHJ4*02     12   ......................T..............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_96816

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           307     1e-85
IGHD6-19*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              52.6    5e-11


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	GATCTACAGTGCGGGGCGC	TGGCTGGT	GGCCGGTTGGGTACAT	GGGCC	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	13	11	0	54.2
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	221	25	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  F  G  M  I  W  V  R  Q  A  P  G  K  G  L  
                    Query_13844  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAGCAGCTTTGGCATGATATGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.8% (221/246)  IGHV3-23*01  47   ................................................A..C.....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  G  P  G  G  P  E  I  H  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  D  S  
                    Query_13844  91   AGTGGGTCTCAGTTATTGGACCTGGTGGTCCTGAGATACACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACGACTCCA  180
V  89.8% (221/246)  IGHV3-23*01  137  ............C....A.TGG.A.....GG.AGC.C.T............................................A.T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT---------------------------------------------------->                            
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  M  Y  Y  C  V  R  S  T  V  R  G  A  G  
                    Query_13844  181  AGAACACTCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTATGTATTACTGTGTGAGATCTACAGTGCGGGGCGCTGGCT  270
V  89.8% (221/246)  IGHV3-23*01  227  .......G............................C............CG.A..........C..------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD6-19*01  12   -------------------------------------------------------------------------------------.....  16

                                                                                    
                                      W  W  P  V  G  Y  M  G  Q  G  T  L  V  T  V  S
                    Query_13844  271  GGTGGCCGGTTGGGTACATGGGCCAGGGAACCCTGGTCACCGTCTC  316
D  100.0% (8/8)     IGHD6-19*01  17   ...-------------------------------------------  19
J  100.0% (27/27)   IGHJ4*02     17   -------------------...........................  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_36011

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           358     4e-101
IGHD2-21*01                                                                                           10.3    124   
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD2-21*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GGTGA	AGACCCCGGAGGGCGCC	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGTGAAGACCCCGGAGGGCGCCTACTTCTCCTATTACGGGATGGACGTC	ARVKTPEGAYFSYYGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	111	3	0	97.4
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	238	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  T  L  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13845  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATACTCTGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (238/247)  IGHV3-21*01  47   ..............................................C....GCA....................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  S  S  G  S  Y  I  Y  Y  A  D  S  V  N  G  R  F  T  I  S  R  D  N  A  
                    Query_13845  91   AGTGGGTCTCATCCATTAGTAGTAGTGGGAGTTACATATACTACGCAGACTCAGTGAACGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (238/247)  IGHV3-21*01  137  ..........................A.T.............................G...............................  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  V  K  T  P  E  G  A  
                    Query_13845  181  AGAACTCACTGTATCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTTTATTACTGTGCGAGGGTGAAGACCCCGGAGGGCGCCT  270
V  96.4% (238/247)  IGHV3-21*01  227  ........................................G...........G..............-----------------------  293
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (5/5)     IGHD2-21*01  14   -------------------------------------------------------------------.....------------------  18
J  91.7% (55/60)    IGHJ6*02     3    -----------------------------------------------------------------------------------------.  3

                                      IMGT--------------------->                                 
                                      Y  F  S  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13845  271  ACTTCTCCTATTACGGGATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTCCTCA  329
J  91.7% (55/60)    IGHJ6*02     4    ...A..A...C.....T.................A........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_96814

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           388     5e-110
IGHD6-6*01                                                                                            21.8    0.045 
IGHJ4*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-6*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCC	ATAGCAGCTCG	GATGGGGA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCCATAGCAGCTCGGATGGGGAACTTTGACTCC	AAIAARMGNFDS	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	267	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  V  S  R  Y
                    Query_13846  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCCGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGGCACCGTCAGTAGGTA  90
V  93.4% (267/286)  IGHV1-69*01  6    ..................G.................T..........................................T....C..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        L  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  L  L  R  T  A  N  Y  A  Q
                    Query_13846  91   TCTTATCAGCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGATCATCCCTCTTTTAAGGACAGCAAACTACGCACA  180
V  93.4% (267/286)  IGHV1-69*01  96   .GC.................................G...........................A.C..TG.T.................  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  V  T  I  T  A  H  E  S  T  S  T  V  Y  M  E  V  N  S  L  G  S  Q  D  T  A
                    Query_13846  181  GAAGTTCCAGGGCAGAGTCACGATTACCGCGCACGAATCCACGAGCACAGTCTACATGGAGGTGAACAGCCTGGGATCTCAGGACACGGC  270
V  93.4% (267/286)  IGHV1-69*01  186  ...............................G..................C..........C...G.......A.....G..........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  A  A  I  A  A  R  M  G  N  F  D  S  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13846  271  CGTGTATTACTGTGCGGCCATAGCAGCTCGGATGGGGAACTTTGACTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  351
V  93.4% (267/286)  IGHV1-69*01  276  ................-----------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                  
D  100.0% (11/11)   IGHD6-6*01   5    -------------------...........---------------------------------------------------  15
J  97.7% (42/43)    IGHJ4*02     4    --------------------------------------.........A.................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_96815

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD1-26*01                                                                                           10.3    113  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCGGAAGAA	GGGAG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGGAAGAAGGGAGATTGACTAC	AGGRREIDY	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	225	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  N  H  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13847  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTAATCACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.8% (225/240)  IGHV4-59*01  49   ........................................G..G.T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  D  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13847  91   TGGATTGGGTATCTTTATTACGATGGTGACACCAAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  93.8% (225/240)  IGHV4-59*01  139  ............A.C......AG...GAG......C......................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  G  R  R  E  I  D  Y  W  G 
                    Query_13847  181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGGGCGGAAGAAGGGAGATTGACTACTGGGGC  270
V  93.8% (225/240)  IGHV4-59*01  229  ...............C...............................G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  9    ----------------------------------------------------------------------.....---------------  13
J  100.0% (42/42)   IGHJ4*02     7    ----------------------------------------------------------------------------..............  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_13847  271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  100.0% (42/42)   IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_36014

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           333     1e-93
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ5*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	CGTGCAGGGGTCGTTA	TACGATTTTTGGAGTGG	GTTCCTGGGA	CCCTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAACGTGCAGGGGTCGTTATACGATTTTTGGAGTGGGTTCCTGGGACCC	ANVQGSLYDFWSGFLGP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	230	17	0	93.1


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  Y  T  F  R  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13848  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATACACCTTTAGAAGTTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.1% (230/247)  IGHV3-23*01  47   .................................T.........C..C...........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  V  I  S  G  S  G  S  N  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13848  91   AGTGGGTCTCAGTTATTAGTGGTAGTGGAAGTAACATATACTACGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAACTCCA  180
V  93.1% (230/247)  IGHV3-23*01  137  ............C...............TG...G..C................................................T....  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      R  N  T  L  Y  L  Q  M  N  T  L  R  A  E  D  S  A  I  Y  Y  C  A  N  V  Q  G  S  L  Y  D  
                    Query_13848  181  GGAATACCCTGTATCTTCAAATGAATACCCTGAGAGCCGAGGACTCGGCCATATATTACTGTGCGAACGTGCAGGGGTCGTTATACGATT  270
V  93.1% (230/247)  IGHV3-23*01  227  A...C..G........G........C.G................A.....G................-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (17/17)   IGHD3-3*01   5    -----------------------------------------------------------------------------------.......  11

                                      GT-------------------->                                  
                                      F  W  S  G  F  L  G  P  W  G  Q  G  I  L  V  P  V  S  S  
                    Query_13848  271  TTTGGAGTGGGTTCCTGGGACCCTGGGGCCAGGGAATCCTGGTCCCCGTCTCCTCAG  327
D  100.0% (17/17)   IGHD3-3*01   12   ..........-----------------------------------------------  21
J  94.6% (35/37)    IGHJ5*02     15   --------------------................C.......A............  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_36016

Length=332
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           366     2e-103
IGHD3-3*01                                                                                            14.1    8.1   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	G	GGAGTGG	GTA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGTGGGTAACAACTGGTTCGACCCC	ARGVGNNWFDP	244	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	241	7	0	97.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  R  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_13849  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAGAAGTGGTGGTTACTACTGGAGCTGGATCCGGCAGCACCCAGGGAAGGGC  90
V  97.2% (241/248)  IGHV4-31*03  49   ..................................C......C.............................C..................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13849  91   CTGGAATGGATTGGGAATATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  97.2% (241/248)  IGHV4-31*03  139  .....G.........T.C........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------CDR3-IMGT------
                                       K  N  Q  F  S  L  K  L  S  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  V  G  N  N  W  F 
                    Query_13849  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGCGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGGGGAGTGGGTAACAACTGGTTC  270
V  97.2% (241/248)  IGHV4-31*03  229  ...............................T....................................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD3-3*01   15   ---------------------------------------------------------------------.......--------------  21
J  100.0% (51/51)   IGHJ5*02     1    -------------------------------------------------------------------------------...........  11

                                      ----->                                  
                                       D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13849  271  GACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  310
J  100.0% (51/51)   IGHJ5*02     12   ........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32205255


Query= Query_36017

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            346     2e-97
IGHD1-26*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	G	AGTGGGA	TGGCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGAGTGGGATGGCTCCCTGACTAC	VGGVGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	235	14	0	94.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  I  S  D  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13850  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCATTAGTGACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.4% (235/249)  IGHV3-7*01   47   ....................................C.T.....AG...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  E  K  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13850  91   AGTGGGTGGCCAACATAGAGAAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  94.4% (235/249)  IGHV3-7*01   137  .................A..C.................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  L  Y  Y  C  V  G  G  V  G  W  L  P  D  
                    Query_13850  181  AGAACTCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTCTGTATTACTGTGTGGGAGGAGTGGGATGGCTCCCTGACT  270
V  94.4% (235/249)  IGHV3-7*01   227  ...................A...A............C.............G............C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD1-26*01  6    ----------------------------------------------------------------------.......-------------  12
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13850  271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_321618

Length=369
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           406     1e-115
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	N/A	TCCTCC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTCCTCCCTACTACGATCTGGACGTC	ASPPYYDLDV	284	313	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	274	14	0	95.1


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  Q  A  S  G  Y  S  F  T  T  Y
                    Query_13851  1    GCAGCTGGTGCAGTCTGGGGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTCAGGCTTCTGGATACAGTTTTACCACCTA  90
V  95.1% (274/288)  IGHV5-51*01  6    ..................A..........................................A...G............C.......G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  R  P  G  K  G  L  E  W  M  A  I  I  Y  P  D  D  S  D  T  R  Y  S  P
                    Query_13851  91   CTGGATCGGCTGGGTGCGCCAAAGGCCCGGGAAAGGCCTGGAGTGGATGGCGATCATCTATCCTGATGACTCTGATACCAGATACAGCCC  180
V  95.1% (274/288)  IGHV5-51*01  96   .....................G.T..........................G..............G........................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  I  S  A  D  K  S  T  S  T  A  Y  L  Q  W  S  G  L  K  A  S  D  T  A
                    Query_13851  181  GTCCTTCCAAGGCCACGTCACCATCTCAGCCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCGGCCTGAAGGCCTCGGACACCGC  270
V  95.1% (274/288)  IGHV5-51*01  186  ...............G.........................T.........................A......................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------CDR3-IMGT--------->                                 
                                        I  Y  Y  C  A  S  P  P  Y  Y  D  L  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13851  271  CATATACTACTGTGCGAGTCCTCCCTACTACGATCTGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  346
V  95.1% (274/288)  IGHV5-51*01  276  ...G..T...........----------------------------------------------------------  293
                                        M  Y  Y  C  A                                                             
J  94.2% (49/52)    IGHJ6*02     11   ------------------------........G.A.....................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36112122


Query= Query_1346

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           336     1e-94
IGHD3-10*01                                                                                           39.1    3e-07
IGHJ6*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	G	ACTATGGAACGGGGAGTTATTATAAC	AAGACCC	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGACTATGGAACGGGGAGTTATTATAACAAGACCCATGGACGTC	AKTMERGVIITRPMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	231	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  V  S  G  F  S  F  S  H  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13852  1    GGTCCCTGAGACTCTCCTGTGCAGTCTCTGGATTCAGCTTCAGTCACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.5% (231/247)  IGHV3-30*18  47   ........................C...........C.......AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  A  Y  D  E  S  F  K  S  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13852  91   AGTGGGTGGCAGTTATAGCATATGATGAAAGTTTTAAATCTTACGCAGCCTCCGTGAAGGGCCGATTTACCATCTCCAGAGACAATTCCA  180
V  93.5% (231/247)  IGHV3-30*18  137  .................T.........G....AA.....AC..T....A..................C......................  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  S  T  L  Y  L  Q  M  N  S  L  R  D  E  D  T  A  V  Y  Y  C  A  K  T  M  E  R  G  V  I  
                    Query_13852  181  AGAGCACGCTGTATCTGCAAATGAACAGCCTGAGAGATGAGGACACGGCTGTGTATTATTGTGCGAAGACTATGGAACGGGGAGTTATTA  270
V  93.5% (231/247)  IGHV3-30*18  227  ...A................................C.....................C........-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  92.3% (24/26)    IGHD3-10*01  6    --------------------------------------------------------------------.......TT.............  27

                                      T------------------>                                 
                                      I  T  R  P  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13852  271  TAACAAGACCCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCGTCA  323
D  92.3% (24/26)    IGHD3-10*01  28   ....-------------------------------------------------  31
J  97.6% (41/42)    IGHJ6*02     21   -----------......................................C...  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_95548

Length=383
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           389     2e-110
IGHD1-26*01                                                                                           23.8    0.012 
IGHJ5*02                                                                                              77.6    2e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AGTATGCCGTCC	TGGGAGCTACTA	GT	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGTATGCCGTCCTGGGAGCTACTAGTTGGTTCGACCCC	AKYAVLGATSWFDP	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	65	5	0	92.9
CDR1-IMGT	71	94	24	18	6	0	75
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	268	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  V  E  V  K  E  P  G  E  S  L  R  I  S  C  R  G  S  G  Y  T  F  I  S  Y
                    Query_13853  1    GCAGCTGGTGCAGTCTGGAGTAGAGGTGAAAGAGCCCGGGGAGTCTCTGAGGATCTCCTGTAGGGGCTCTGGGTACACCTTTATTAGTTA  90
V  93.4% (268/287)  IGHV5-51*01  6    ....................C..........A..................A...........A...T.....A....G.....CC..C..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  V  I  Y  P  G  D  S  E  T  R  Y  N  P
                    Query_13853  91   TTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGAGACCAGATACAACCC  180
V  93.4% (268/287)  IGHV5-51*01  96   C.......G...........................................A......................T..........G...  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  H  V  T  L  S  A  D  K  S  I  N  T  A  Y  L  H  W  S  S  L  K  A  S  D  T  A
                    Query_13853  181  GTCCTTCCAAGGCCACGTCACCCTCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCACTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  93.4% (268/287)  IGHV5-51*01  186  ...............G......A.....................G...............G.............................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  K  Y  A  V  L  G  A  T  S  W  F  D  P  W  G  Q  G  T  L  V  I  V  S  S  
                    Query_13853  271  CATGTATTACTGTGCGAAGTATGCCGTCCTGGGAGCTACTAGTTGGTTCGACCCCTGGGGCCAGGGAACCCTAGTCATCGTCTCCTCAG  359
V  93.4% (268/287)  IGHV5-51*01  276  .................------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                          
D  100.0% (12/12)   IGHD1-26*01  8    -----------------------------............------------------------------------------------  19
J  95.7% (44/46)    IGHJ5*02     6    -------------------------------------------.............................G....C...........  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37590396


Query= Query_23928

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*01                                                                                         339     2e-95
IGHD6-13*01                                                                                           25.7    0.003
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GGTGGGGTGCGTTATGC	CAGCAGCTGGTAC	GG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTGGGGTGCGTTATGCCAGCAGCTGGTACGGCTAC	ARGGVRYASSWYGY	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	56	27	27	0	0	100
FR2-IMGT	57	107	51	49	2	0	96.1
CDR2-IMGT	108	128	21	20	1	0	95.2
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                        <--------FR1-IMGT--------><--------CDR1-IMGT--------><--------------------FR2-IMGT--------
                                           L  R  L  S  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  L  R  Q  P  P  G  K  G  L  
                    Query_13854    4    CCCTGAGACTCTCCTGCGCTGTCTCTGGTTACTCCATCAGCAGTGGTTACTACTGGGGCTGGCTCCGGCAGCCCCCAGGGAAGGGGCTGG  93
V  94.3% (231/245)  IGHV4-38-2*01  50   .....TCC...A..................................................A...........................  139
                                           L  S  L  T  C  A  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L  

                                        -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                        E  W  I  G  T  I  Y  H  S  G  T  T  Y  Y  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S  K  
                    Query_13854    94   AGTGGATTGGGACTATCTATCATAGTGGGACCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCACTATGTCAGTAGACACGTCCAAGA  183
V  94.3% (231/245)  IGHV4-38-2*01  140  ............G.................G....................................C..A...................  229
                                        E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  

                                        3-IMGT----------------------------------------------------><----------------CDR3-IMGT-----
                                        N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  F  Y  C  A  R  G  G  V  R  Y  A  S  S  
                    Query_13854    184  ACCACTTCTCCCTAAAGCTGAGCTCTGTGACGGCCGCTGACACGGCCGTGTTTTACTGTGCGAGAGGTGGGGTGCGTTATGCCAGCAGCT  273
V  94.3% (231/245)  IGHV4-38-2*01  230  ....G........G.................C.....A.............A.............-------------------------  294
                                        N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                          
D  100.0% (13/13)   IGHD6-13*01    9    ----------------------------------------------------------------------------------........  16

                                        ---------->                                
                                        W  Y  G  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13854    274  GGTACGGCTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  316
D  100.0% (13/13)   IGHD6-13*01    17   .....--------------------------------------  21
J  100.0% (36/36)   IGHJ4*02       11   -------....................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_23929

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD1-1*01                                                                                            14.1    9.2   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAGGGGG	CAACTGG	GACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTAC	ARGGGNWDPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	270	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  Y
                    Query_13855  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCTA  90
V  93.8% (270/288)  IGHV5-51*01  6    .................................................................G............C......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  V  V  Y  P  D  D  S  D  A  R  Y  S  P
                    Query_13855  91   CTGGATCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGGTCGTCTATCCTGATGACTCTGATGCCAGATACAGCCC  180
V  93.8% (270/288)  IGHV5-51*01  96   ..................C..G.........A..........G.........A..A.........G..........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  I  T  I  S  A  D  K  S  I  S  T  A  F  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_13855  181  GTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACACCGC  270
V  93.8% (270/288)  IGHV5-51*01  186  .......C.......GG....................................A...........G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  G  N  W  D  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13855  271  CATCTATTACTGTGCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.8% (270/288)  IGHV5-51*01  276  ...G..............-----------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------.......-------------------------------------------------  11
J  100.0% (44/44)   IGHJ4*02     5    ---------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_23926

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-38-2*02                                                                                         311     4e-87
IGHD3-3*01                                                                                            14.1    8.5  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-38-2*02	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	241	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	23	4	0	85.2
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	17	4	0	81
FR3-IMGT	127	240	114	106	8	0	93
CDR3-IMGT (germline)	241	247	7	7	0	0	100
Total	N/A	N/A	247	223	24	0	90.3


Alignments

                                        <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                         T  L  S  L  T  C  R  V  S  G  Y  S  I  S  N  Y  V  Y  W  A  W  I  R  Q  S  P  G  K  G  L 
                    Query_13856    1    ACCCTGTCCCTCACCTGCCGCGTCTCCGGTTACTCCATCAGCAATTATGTCTACTGGGCCTGGATCCGGCAGTCCCCAGGAAAGGGGCTG  90
V  90.3% (223/247)  IGHV4-38-2*02  49   ..................ACT.....T................G.GG.TA........G.............C.......G.........  138
                                         T  L  S  L  T  C  T  V  S  G  Y  S  I  S  S  G  Y  Y  W  G  W  I  R  Q  P  P  G  K  G  L 

                                        --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                         E  W  I  G  S  I  Y  Q  S  G  A  T  Y  Y  N  P  S  L  Q  S  R  V  T  L  S  V  D  T  S  K 
                    Query_13856    91   GAGTGGATTGGGAGTATTTATCAGAGTGGGGCCACCTACTACAACCCGTCCCTCCAGAGTCGAGTCACCTTGTCAGTGGACACGTCCAAG  180
V  90.3% (223/247)  IGHV4-38-2*02  139  .................C.....T......AG......................A..............A.A.....A............  228
                                         E  W  I  G  S  I  Y  H  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                        R3-IMGT----------------------------------------------------><-------------------CDR3-IMGT-
                                         N  Q  F  P  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F 
                    Query_13856    181  AACCAGTTCCCCCTGAAGCTGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTT  270
V  90.3% (223/247)  IGHV4-38-2*02  229  .........T............................A........C..G................-----------------------  295
                                         N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                         
D  100.0% (7/7)     IGHD3-3*01     9    ------------------------------------------------------------------------------------......  14

                                        ----------------->                                  
                                         V  A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13856    271  GTCGCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  100.0% (7/7)     IGHD3-3*01     15   .---------------------------------------------------  15
J  100.0% (43/43)   IGHJ4*02       6    ---------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_321613

Length=407
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           420     8e-120
IGHD3-16*01                                                                                           35.3    4e-06 
IGHJ3*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	GCTA	GTATTATGTTTACATTTGGGGGAG	AAACACACCGTCTGAC	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTAGTATTATGTTTACATTTGGGGGAGAAACACACCGTCTGACTGATGCTTTTGAGATC	ARASIMFTFGGETHRLTDAFEI	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	279	10	0	96.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  S  S  Y
                    Query_13857  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTAGCAGCTA  90
V  96.5% (279/289)  IGHV5-51*03  6    .............................................................................G.....C......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  E  G  L  E  W  M  G  V  I  Y  P  G  D  S  D  T  R  Y  G  P
                    Query_13857  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGGAAGGCCTGGAGTGGATGGGGGTCATCTATCCTGGTGACTCTGATACCAGATACGGGCC  180
V  96.5% (279/289)  IGHV5-51*03  96   ...............................A....................A................................A.C..  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13857  181  GTCCTTCGAAGGCCAGGTCACCGTGTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.5% (279/289)  IGHV5-51*03  186  .......C..............A.C.................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------------CDR3-IMGT--------------------------->           
                                        M  Y  Y  C  A  R  A  S  I  M  F  T  F  G  G  E  T  H  R  L  T  D  A  F  E  I  W  G  Q  G
                    Query_13857  271  CATGTATTACTGCGCGAGAGCTAGTATTATGTTTACATTTGGGGGAGAAACACACCGTCTGACTGATGCTTTTGAGATCTGGGGCCAAGG  360
V  96.5% (279/289)  IGHV5-51*03  276  ............T......-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  91.7% (22/24)    IGHD3-16*01  1    -----------------------........A....G..........-------------------------------------------  24
J  96.0% (48/50)    IGHJ3*02     1    ---------------------------------------------------------------............T..............  27

                                                             
                                        T  V  V  T  V  S  S  
                    Query_13857  361  GACAGTGGTCACCGTCTCTTCAG  383
J  96.0% (48/50)    IGHJ3*02     28   ....A..................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39867768


Query= Query_321610

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           321     7e-90
IGHD2-21*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              58.4    9e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-21*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	TAATCCCGACGA	TGGTGGTG	CCTACAATTATCCTAACG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGTAATCCCGACGATGGTGGTGCCTACAATTATCCTAACGAC	ASNPDDGGAYNYPND	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	247	5	5	0	0	100
Total	N/A	N/A	247	226	21	0	91.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13858  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTTCCTATGGCATGCACTGGGTCCGCCAGGCTCCTGGCAAGGGGCTGG  90
V  91.5% (226/247)  IGHV3-33*01  47   ............................................AG..............................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  F  I  F  E  D  G  S  E  T  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13858  91   AGTGGGTGGCTTTTATATTCGAAGATGGAAGTGAAACATACTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGGGACAATTCCA  180
V  91.5% (226/247)  IGHV3-33*01  137  ..........AG......GGT.T.........A.T.A........C.................................A..........  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      R  N  T  L  Y  L  H  L  N  G  L  R  A  E  D  T  A  V  Y  Y  C  A  S  N  P  D  D  G  G  A  
                    Query_13858  181  GGAACACACTCTATCTGCATCTGAACGGCCTGAGAGCCGAGGACACGGCTGTCTATTACTGTGCGAGTAATCCCGACGATGGTGGTGCCT  270
V  91.5% (226/247)  IGHV3-33*01  227  A......G..G........AA.....A.........................G..............-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  100.0% (8/8)     IGHD2-21*01  10   -------------------------------------------------------------------------------........---  17

                                      ---------------->                                  
                                      Y  N  Y  P  N  D  W  G  R  G  T  L  V  T  V  S  S  
                    Query_13858  271  ACAATTATCCTAACGACTGGGGCCGGGGAACCCTGGTCACCGTCTCTTCAG  321
J  94.4% (34/36)    IGHJ4*02     13   ---------------.........A.....................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_95546

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	107	7	0	93.9
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13859  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  92.7% (227/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_13859  91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCGGTAGACACGTCCAAGAGC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A..A................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  S  S  L  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_13859  181  CAGTTCTCCCTGAAGCTGAGCTCTCTGACCGCTGCGGACGCGGCCGTGTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  92.7% (227/245)  IGHV4-59*01  229  ........................G..............A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13859  271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_321616

Length=387
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD6-19*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGA	ATAGCAGTGGCT	AATACGGGGC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTAC	ARRIAVANTGHYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	277	12	0	95.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  S  Y
                    Query_13860  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAGCTA  90
V  95.8% (277/289)  IGHV5-51*03  6    .............................................................................G............  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  V  W  V  R  Q  M  P  G  R  G  L  E  W  M  G  I  I  Y  P  G  G  S  N  T  R  Y  S  P
                    Query_13860  91   CTGGATCGTCTGGGTGCGCCAGATGCCCGGGAGAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGGCTCTAATACCCGATACAGCCC  180
V  95.8% (277/289)  IGHV5-51*03  96   ........G.......................A...................................A....G.....A..........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  R  T  A  Y  L  Q  W  S  S  L  Q  A  A  D  T  A
                    Query_13860  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGGACCGCCTACCTCCAGTGGAGCAGCCTGCAGGCCGCGGACACCGC  270
V  95.8% (277/289)  IGHV5-51*03  186  .............................................C...........G...............A.....T..........  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        V  Y  Y  C  A  R  R  I  A  V  A  N  T  G  H  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13860  271  CGTCTATTACTGTGCGAGACGAATAGCAGTGGCTAATACGGGGCACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  95.8% (277/289)  IGHV5-51*03  276  .A.G...............-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (12/12)   IGHD6-19*01  5    ----------------------............--------------------------------------------------------  16
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_13860  361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38012760


Query= Query_95540

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           258     4e-71
IGHD2-2*01                                                                                            16.1    2.2  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGAA	GACGA	ATACTGTACTACTCCCGGCTGCT	TTAAGTACCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAGACGAATACTGTACTACTCCCGGCTGCTTTAAGTACCCTTGACTCC	VKTNTVLLPAALSTLDS	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	44	7	0	86.3
CDR2-IMGT	105	125	24	13	8	3	54.2
FR3-IMGT	126	239	114	98	16	0	86
CDR3-IMGT (germline)	240	244	5	4	1	0	80
Total	N/A	N/A	247	208	36	3	84.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  V  Y  V  M  A  W  V  R  Q  A  P  G  R  G  L  
                    Query_13861  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTACCGTCTATGTCATGGCGTGGGTCCGCCAGGCTCCAGGGAGGGGCCTGG  90
V  84.2% (208/247)  IGHV3-23*01  47   ..........................................G.AG.....C....AGC......................A...G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  A  T     G  N  G  A  A  A  Y  Y  A  D  S  V  K  G  R  F  N  T  S  R  D  N  S  
                    Query_13861  91   AGTGGGTCGCAGCGACT---GGAAATGGTGCAGCCGCATACTATGCCGACTCCGTGAAGGGCCGGTTCAACACCTCCAGGGACAATTCCG  177
V  84.2% (208/247)  IGHV3-23*01  137  ........T....T.T.AGT..T.G.....GTAG.A.......C..A......................C..T......A.........A  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      E  N  T  L  F  L  D  M  S  G  L  R  A  G  D  T  A  V  Y  Y  C  V  K  T  N  T  V  L  L  P  
                    Query_13861  178  AGAATACCCTTTTTCTGGATATGAGCGGCCTGAGAGCCGGCGACACGGCCGTATATTACTGTGTGAAGACGAATACTGTACTACTCCCGG  267
V  84.2% (208/247)  IGHV3-23*01  227  ....C..G..G.A....C.A....A.A............AG......................C...-----------------------  293
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  78.3% (18/23)    IGHD2-2*01   4    ------------------------------------------------------------------------...T....G..G.A..A.  21

                                      GT-------------------->                                  
                                      A  A  L  S  T  L  D  S  W  G  Q  G  A  L  V  T  V  A  S  
                    Query_13861  268  CTGCTTTAAGTACCCTTGACTCCTGGGGCCAGGGAGCCCTGGTCACCGTCGCCTCAG  324
D  78.3% (18/23)    IGHD2-2*01   22   .....----------------------------------------------------  26
J  92.9% (39/42)    IGHJ4*02     7    ---------------......A.............A..............T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_321614

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           350     8e-99
IGHD6-13*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TC	GGTATAGCA	ATGCCTATTACCCCGTGGATTT	GTTCG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCGGTATAGCAATGCCTATTACCCCGTGGATTTGTTCGACCCC	ARDRYSNAYYPVDLFDP	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  P  F  S  S  Y  G  M  H  W  V  R  Q  S  P  G  K  G  L  
                    Query_13862  1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCCCTTTCAGTAGCTATGGCATGCACTGGGTCCGCCAGTCTCCAGGCAAGGGGCTGG  90
V  94.8% (237/250)  IGHV3-33*01  47   ....................G..............A.C.................................G..................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  D  D  G  S  N  K  F  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13862  91   AGTGGGTGGCAGTGATATGGGATGATGGAAGTAATAAGTTCTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  94.8% (237/250)  IGHV3-33*01  137  .............T......T................A.A..................................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  N  D  T  A  V  Y  Y  C  A  R  D  R  Y  S  N  A  Y  
                    Query_13862  181  AGAACACTCTGTATCTACAAATGAACAGCCTGAGAGCCAATGACACGGCTGTCTATTACTGTGCGAGAGATCGGTATAGCAATGCCTATT  270
V  94.8% (237/250)  IGHV3-33*01  227  .......G........G.....................G.G...........G.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD6-13*01  2    ------------------------------------------------------------------------.........---------  10

                                      GT-------------------->                                  
                                      Y  P  V  D  L  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13862  271  ACCCCGTGGATTTGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  327
J  100.0% (44/44)   IGHJ5*02     8    -------------............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_321615

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            276     3e-76
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	96	18	0	84.2
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	211	35	0	85.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_13863  1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  85.8% (211/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  S  M  S  V  D  K  S  K 
                    Query_13863  91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCAGCATGTCAGTAGACAAGTCCAAG  180
V  85.8% (211/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A............C...A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  N  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_13863  181  AATCAATTCTCCCTCACGCTGACGTCTCTGAACGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  85.8% (211/246)  IGHV4-4*01   229  ..C..G........G.A.....GC...G...C..................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_13863  271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_10933

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            357     1e-100
IGHD4-17*01                                                                                           25.7    0.003 
IGHJ6*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD4-17*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	N/A	CTACGGTGACTAC	AGT	TACGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGACTACGGTGACTACAGTTACGACTATTACGGTATGGACGTC	ARDYGDYSYDYYGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  N  N  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13864  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTTAATAACTATTGGATGAGTTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-7*01   47   ....................................C.....G..G............C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  T  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  E  G  R  F  T  I  S  R  D  N  A  
                    Query_13864  91   AGTGGGTGGCCACCATAAAGCAAGATGGAAGTGAGAAGTACTATGTGGACTCTGTGGAGGGCCGCTTCACCATCTCCAGGGACAACGCCA  180
V  95.6% (239/250)  IGHV3-7*01   137  ............A........................A..................A.......A..............A..........  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  Y  G  D  Y  S  Y  
                    Query_13864  181  AGAACTCACTGTATCTCCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGGGACTACGGTGACTACAGTTACG  270
V  95.6% (239/250)  IGHV3-7*01   227  ................G..................................................A..--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (13/13)   IGHD4-17*01  4    ----------------------------------------------------------------------.............-------  16
J  96.5% (55/57)    IGHJ6*02     6    --------------------------------------------------------------------------------------...T  9

                                      T------------------>                                 
                                      D  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13864  271  ACTATTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  323
J  96.5% (55/57)    IGHJ6*02     10   ....C................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_10932

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           414     5e-118
IGHD7-27*01                                                                                           18.0    0.67  
IGHJ3*02                                                                                              91.1    2e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD7-27*01	IGHJ3*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCCCGCCGCGGCA	AACTGGGGA	T	TGATG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCCCGCCGCGGCAAACTGGGGATTGATGCTTTTCATATC	RDPAAANWGLMLFIS	288	332	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	74	74	72	1	1	97.3
CDR1-IMGT	75	98	24	21	3	0	87.5
FR2-IMGT	99	149	51	50	1	0	98
CDR2-IMGT	150	173	24	23	1	0	95.8
FR3-IMGT	174	287	114	109	5	0	95.6
CDR3-IMGT (germline)	288	293	6	6	0	0	100
Total	N/A	N/A	293	281	11	1	95.9


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L   C  S  L  E  Q  R  S  K  S  R  G  S  L  *  R  S  P  V  R  V  L  D  T  A  L  P 
                    Query_13865  2    AGGTGCAGCTG-TGCAGTCTGGAGCAGAGGTCAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCA  90
V  95.9% (281/293)  IGHV5-51*03  2    ...........G...................G..........................................................  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                       V  T  S  S  A  G  C  A  R  R  P  G  K  A  W  S  G  W  G  S  S  I  L  M  T  L  I  P  D  T 
                    Query_13865  91   GTTACTTCATCGGCTGGGTGCGCCAGACGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGATGACTCTGATACCAGATACA  180
V  95.9% (281/293)  IGHV5-51*03  92   .C....GG...................T.........................................G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                       A  R  P  S  K  A  R  S  P  S  Q  P  T  S  P  S  T  P  P  T  C  S  G  A  A  *  R  P  R  T 
                    Query_13865  181  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACA  270
V  95.9% (281/293)  IGHV5-51*03  182  ................................................G.........................................  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                            
                                       A  A  Y  I  I  V  R  D  P  A  A  A  N  W  G  L  M  L  F  I  S  G  A  K  G  Q  W  S  P  S 
                    Query_13865  271  GCGGCATATATTATTGTGCGAGACCCCGCCGCGGCAAACTGGGGATTGATGCTTTTCATATCTGGGGCCAAGGGACAATGGTCACCGTCT  360
V  95.9% (281/293)  IGHV5-51*03  272  C..C...G.....C.........-------------------------------------------------------------------  294
                                      T  A  M  Y  Y  C  A  R                                                                    
D  100.0% (9/9)     IGHD7-27*01  3    ------------------------------------.........---------------------------------------------  11
J  98.0% (49/50)    IGHJ3*02     1    ----------------------------------------------..........G.................................  44

                                            
                                       L  Q 
                    Query_13865  361  CTTCAG  366
J  98.0% (49/50)    IGHJ3*02     45   ......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_10931

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           308     4e-86
IGHD2-15*01                                                                                           29.5    2e-04
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD2-15*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCGGGACG	TGTAGTGGTGGAAACTGCTAC	GTCCATACTC	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCGGGACGTGTAGTGGTGGAAACTGCTACGTCCATACTCTTGATATC	ARDPGTCSGGNCYVHTLDI	240	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	103	11	0	90.4
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	222	25	0	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  S  A  S  G  F  S  V  T  S  N  S  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_13866  1    GGTCCCTGAGACTCTCCTGTTCAGCCTCTGGGTTCAGCGTCACCAGCAACTCCATGACCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  89.9% (222/247)  IGHV3-53*01  47   ....................G...............C.....GT.......A.....G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  A  V  I  Y  G  G  G  T  T  R  Y  T  D  S  V  K  G  R  F  T  V  S  R  D  N  F  N  
                    Query_13866  91   AGTGGGTAGCTGTTATTTATGGCGGCGGCACAACACGCTACACAGACTCCGTGAAGGGCCGATTCACCGTTTCCAGAGACAATTTCAACA  180
V  89.9% (222/247)  IGHV3-53*01  137  .......CT.A.........A....T..T.GC...TA....G..........................A.C.............C...G.  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><-----------------------CDR3-IM
                                      N  T  L  H  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  R  D  P  G  T  C  S  G  G  
                    Query_13866  181  ACACGCTGCATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCCTCTATTATTGTGCGAGAGATCCCGGGACGTGTAGTGGTGGAA  270
V  89.9% (222/247)  IGHV3-53*01  227  ........T......................................G.G.....C...........-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          
D  90.5% (19/21)    IGHD2-15*01  8    -----------------------------------------------------------------------------...........T.  20

                                      GT----------------------->                                  
                                      N  C  Y  V  H  T  L  D  I  W  G  Q  G  T  R  V  T  V  S  S  
                    Query_13866  271  ACTGCTACGTCCATACTCTTGATATCTGGGGCCAAGGGACAAGGGTCACCGTCTCTTCAG  330
D  90.5% (19/21)    IGHD2-15*01  21   G.......----------------------------------------------------  28
J  97.6% (41/42)    IGHJ3*02     9    ------------------........................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_10930

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-48*03                                                                                           318     6e-89
IGHD3-16*01                                                                                           12.2    32   
IGHJ2*01                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-48*03	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCCGCCG	TGGGGG	CATCAAGGGATC	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCCGCCGTGGGGGCATCAAGGGATCCTGGTACTCCGATCTC	ARVRRGGIKGSWYSDL	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	14	10	0	58.3
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	226	23	0	90.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  H  E  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13867  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGACATGAGATGAATTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  90.8% (226/249)  IGHV3-48*03  47   ..............................................TT....A.....C...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  E  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  H  I  S  T  G  S  T  L  I  H  Y  A  D  S  V  K  G  Q  F  T  I  S  R  D  N  A  
                    Query_13867  91   AGTGGGTTTCACACATTTCCACTGGTAGTACTCTTATACACTACGCAGACTCTGTGAAGGGCCAATTCACCATCTCCAGAGACAACGCCG  180
V  90.8% (226/249)  IGHV3-48*03  137  ...........T.....AGT.G.A..G...G.ACC...T........................G.........................A  226
                                      E  W  V  S  Y  I  S  S  S  G  S  T  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      E  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  V  R  R  G  G  I  K  
                    Query_13867  181  AGAATTCTCTCTATCTACAAATGAACAGCCTGAGAGCCGAGGACACGGCTATTTATTACTGTGCGAGAGTCCGCCGTGGGGGCATCAAGG  270
V  90.8% (226/249)  IGHV3-48*03  227  ....C..A..G.....G.................................G..................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (6/6)     IGHD3-16*01  17   ----------------------------------------------------------------------------......--------  22

                                      T------------------>                                  
                                      G  S  W  Y  S  D  L  W  G  R  G  T  L  V  T  V  S  P  
                    Query_13867  271  GATCCTGGTACTCCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCCCAG  324
J  96.0% (48/50)    IGHJ2*01     4    ----........T.....................................T...  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_10935

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           357     1e-100
IGHD2-2*02                                                                                            35.3    4e-06 
IGHJ3*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD2-2*02	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCCAA	ATATTGTACTACCACCAGCTGCTATAC	AC	ATGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCCAAATATTGTACTACCACCAGCTGCTATACACATGCTTTTGAAAAC	ARDPKYCTTTSCYTHAFEN	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  R  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13868  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGTCGCTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (239/250)  IGHV3-33*01  47   ............................................A.............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  T  A  I  W  A  D  G  S  N  K  Y  Y  G  D  S  V  R  G  R  F  T  I  S  R  D  N  S  
                    Query_13868  91   AGTGGGTGACAGCTATATGGGCTGATGGAAGTAATAAATACTATGGAGACTCCGTGAGGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  95.6% (239/250)  IGHV3-33*01  137  ........G...T.......TA.......................C...........A................................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  D  T  L  Y  L  Q  M  D  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  K  Y  C  T  T  
                    Query_13868  181  AGGACACACTGTATCTACAAATGGACAGCCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCGAGAGACCCCAAATATTGTACTACCA  270
V  95.6% (239/250)  IGHV3-33*01  227  ..A....G........G......A..............................................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  88.9% (24/27)    IGHD2-2*02   4    ----------------------------------------------------------------------------........G..GT.  17

                                      -IMGT----------------------->                                  
                                      T  S  C  Y  T  H  A  F  E  N  W  G  Q  G  T  V  V  I  V  S  S  
                    Query_13868  271  CCAGCTGCTATACACATGCTTTTGAAAACTGGGGCCAAGGGACAGTGGTCATCGTCTCTTCAG  333
D  88.9% (24/27)    IGHD2-2*02   18   .............--------------------------------------------------  30
J  91.7% (44/48)    IGHJ3*02     3    ---------------..........T.T................A......C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_10934

Length=382
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           439     2e-125
IGHD3-16*01                                                                                           12.2    35    
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGTTGAGG	GATTAC	CAACCGTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTAC	ARSLRDYQPFYFDY	284	325	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	285	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  F  T  N  Y
                    Query_13869  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTTACCAACTA  90
V  98.6% (285/289)  IGHV5-51*03  6    .............................................................................G........G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_13869  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.6% (285/289)  IGHV5-51*03  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  V  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13869  181  GTCCTTCCAAGGCCAGGTCACCGTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACTGC  270
V  98.6% (285/289)  IGHV5-51*03  186  ......................A................................................................C..  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------CDR3-IMGT--------------->                                  
                                        M  Y  Y  C  A  R  S  L  R  D  Y  Q  P  F  Y  F  D  Y  W  G  L  G  T  L  V  T  V  S  S  
                    Query_13869  271  CATGTATTACTGTGCGAGATCGTTGAGGGATTACCAACCGTTCTACTTTGACTACTGGGGCCTGGGAACCCTGGTCACCGTCTCCTCAG  359
V  98.6% (285/289)  IGHV5-51*03  276  ...................----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                       
D  100.0% (6/6)     IGHD3-16*01  8    ----------------------------......-------------------------------------------------------  13
J  97.9% (46/47)    IGHJ4*02     2    ------------------------------------------....................A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37484805


Query= Query_2352

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           311     4e-87
IGHD6-19*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD6-19*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGCA	TCGTGGTAC	CAGTGGCTGG	CAAACC	GATGC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGCATCGTGGTACCAGTGGCTGGCAAACCGATGCTTTTGAGATC	ARHRGTSGWQTDAFEI	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	101	13	0	88.6
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13870  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.6% (222/245)  IGHV4-59*08  49   .........................................T...T............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  S  I  Y  Y  Y  G  G  I  N  Y  N  P  S  F  E  T  R  A  T  I  S  I  H  T  S  R  Q 
                    Query_13870  91   TGGATTGCGTCTATCTATTACTATGGGGGCATAAACTACAACCCCTCCTTCGAGACTCGAGCCACCATATCAATACACACGTCCAGGCAG  180
V  90.6% (222/245)  IGHV4-59*08  139  .......G..A..........AG....A...CC...............C..A...G.....T..........G..G.........A.A.C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  Y  V  T  A  T  D  S  A  V  Y  Y  C  A  R  H  R  G  T  S  G  W  Q  T 
                    Query_13870  181  CAGTTCTCTCTGAAGCTGAGCTATGTGACCGCCACAGACTCGGCCGTGTATTACTGTGCGAGGCATCGTGGTACCAGTGGCTGGCAAACC  270
V  90.6% (222/245)  IGHV4-59*08  229  ........C.............C..........G.....A......................A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD6-19*01  9    --------------------------------------------------------------------------..........------  18

                                      -------------->                                  
                                       D  A  F  E  I  W  G  Q  G  T  M  V  T  V  S  S  
                    Query_13870  271  GATGCTTTTGAGATCTGGGGCCAAGGGACAATGGTCACCGTCTCTTCAG  319
J  98.0% (48/49)    IGHJ3*02     2    ...........T.....................................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_10939

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           311     4e-87
IGHD3-10*01                                                                                           18.0    0.59 
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGG	CCGAAGGTACCT	TGGGTCGGGGAG	ATTTATACCGTTTTCG	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGCCGAAGGTACCTTGGGTCGGGGAGATTTATACCGTTTTCGGACTAT	ARGRRYLGSGRFIPFSDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	222	23	0	90.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  E  V  Y  G  G  S  F  N  N  Y  F  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13871  1    ACCCTGTCCCTCACCTGCGAAGTCTATGGTGGGTCCTTCAATAATTACTTCTGGAACTGGATCCGCCAGCCCCCAGGAAAGGGTCTGGAG  90
V  90.6% (222/245)  IGHV4-34*01  49   ...................CT...................G.GG.....A.....G.....................G.....G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  V  S  H  S  G  N  T  N  Y  N  L  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_13871  91   TGGATTGGGGAAGTCAGTCATAGTGGCAACACCAACTACAACCTGTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  90.6% (222/245)  IGHV4-34*01  139  ............A...A.........A.G..............C............................G.................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  Y  S  L  N  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  R  R  Y  L  G  S  G  R 
                    Query_13871  181  CAGTACTCCCTGAACCTGGCTTCTGTGACCGCCGCGGACACGGCTGTCTACTACTGTGCGAGGGGCCGAAGGTACCTTGGGTCGGGGAGA  270
V  90.6% (222/245)  IGHV4-34*01  229  ....T.........G...AGC..........................G..T...........A..-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  91.7% (11/12)    IGHD3-10*01  10   -----------------------------------------------------------------------------...T........-  21

                                      -------------------->                                  
                                       F  I  P  F  S  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13871  271  TTTATACCGTTTTCGGACTATTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  97.5% (39/40)    IGHJ4*02     9    ---------------.....C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_2350

Length=375
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*01                                                                                            405     3e-115
IGHD6-13*01                                                                                           12.2    35    
IGHJ4*02                                                                                              60.3    3e-13 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	G	GGGTAT	GACGCTCCG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGGGGTATGACGCTCCGTTTGAGTAC	ARGGYDAPFEY	284	316	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	275	16	0	94.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y
                    Query_13872  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCACCAGTTA  90
V  94.5% (275/291)  IGHV1-8*01   6    ..................G.......................................................................  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        Y  I  N  W  V  R  Q  A  T  G  Q  G  L  V  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q
                    Query_13872  91   TTATATCAACTGGGTGCGGCAGGCCACAGGACAAGGGCTTGTCTGGATGGGATGGATGAACCCTAACAGTGGTAACACAGGCTATGCACA  180
V  94.5% (275/291)  IGHV1-8*01   96   .G................A........T.............AG...............................................  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  Q  G  R  I  T  V  T  G  D  T  S  K  S  T  G  Y  M  E  R  S  S  R  K  S  E  D  T  A
                    Query_13872  181  GAAGTTCCAGGGCAGAATCACCGTGACCGGGGACACCTCCAAAAGCACAGGCTACATGGAGCGGAGCAGCCGGAAATCTGAGGACACGGC  270
V  94.5% (275/291)  IGHV1-8*01   186  ................G.....A.....A..A.........T........C...........T........T..G...............  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><-----------CDR3-IMGT----------->                                  
                                        V  C  Y  C  A  R  G  G  Y  D  A  P  F  E  Y  W  G  Q  G  T  L  F  T  V  P  S  
                    Query_13872  271  CGTGTGTTACTGTGCGAGAGGGGGGTATGACGCTCCGTTTGAGTACTGGGGCCAGGGAACCCTATTCACCGTCCCCTCAG  350
V  94.5% (275/291)  IGHV1-8*01   276  .....A...............-----------------------------------------------------------  296
                                        V  Y  Y  C  A  R  G                                                           
D  100.0% (6/6)     IGHD6-13*01  1    ----------------------......----------------------------------------------------  6
J  90.7% (39/43)    IGHJ4*02     6    -------------------------------------.....C....................GG........T......  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36745668


Query= Query_2357

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           338     4e-95
IGHD3-22*01                                                                                           16.1    2.2  
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGAA	AGTGGTTA	CTA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGAAAGTGGTTACTATGAAGCTTTTGATATC	ARSESGYYEAFDI	243	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	106	8	0	93
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  A  L  S  S  Y  D  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13873  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCGCCCTCAGCAGCTATGATATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.5% (232/248)  IGHV3-30*04  47   ...................................A..T....T.......C......................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  I  I  S  Y  D  G  G  N  K  N  Y  A  D  S  V  R  G  R  F  T  L  S  R  D  N  S  
                    Query_13873  91   AGTGGGTGTCAATTATATCATATGATGGAGGAAATAAAAATTACGCAGACTCCGTGAGGGGCCGATTCACCTTGTCCAGGGACAATTCCA  180
V  93.5% (232/248)  IGHV3-30*04  137  ........G..G.................A.T......T.C................A.............A.C.....A..........  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  T  L  F  L  Q  M  N  S  L  S  A  E  D  T  A  V  Y  Y  C  A  R  S  E  S  G  Y  Y  E  
                    Query_13873  181  AGAACACGCTGTTTCTGCAAATGAACAGCCTGAGCGCTGAGGACACGGCTGTGTATTACTGTGCGAGATCGGAAAGTGGTTACTATGAAG  270
V  93.5% (232/248)  IGHV3-30*04  227  ............A.....................A.................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD3-22*01  17   --------------------------------------------------------------------------........--------  24
J  94.0% (47/50)    IGHJ3*02     1    -------------------------------------------------------------------------------------...T.  5

                                      ---------->                                  
                                      A  F  D  I  W  G  P  G  T  M  V  T  V  S  S  
                    Query_13873  271  CTTTTGATATCTGGGGCCCAGGGACAATGGTCACCGTCTCCTCAG  315
J  94.0% (47/50)    IGHJ3*02     6    ..................A.....................T....  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_2356

Length=366
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           386     1e-109
IGHD3-22*01                                                                                           33.4    1e-05 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTTTG	ACTATGATAGTAGTGGT	ACTTACCACGTT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTTTGACTATGATAGTAGTGGTACTTACCACGTTTTTGACTAC	ARFDYDSSGTYHVFDY	261	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	74	24	23	1	0	95.8
FR2-IMGT	75	125	51	50	1	0	98
CDR2-IMGT	126	146	21	19	2	0	90.5
FR3-IMGT	147	260	114	111	3	0	97.4
CDR3-IMGT (germline)	261	265	5	5	0	0	100
Total	N/A	N/A	265	256	9	0	96.6


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  I  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  Y  W  S  W  I  R  
                    Query_13874  1    CAGGACTGGTGAAGCCCTCGGAGATCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTCCTACTGGAGCTGGATCCGGC  90
V  96.6% (256/265)  IGHV4-59*01  26   ................T.......C............................................A....................  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  
                    Query_13874  91   AGCCCCCAGGGAAGGGACTGGAGTGGATTGGATATATCTATTACAGTGGCAGTACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCA  180
V  96.6% (256/265)  IGHV4-59*01  116  ...............................G.................G..C.....................................  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      I  S  L  D  T  S  R  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  
                    Query_13874  181  TATCATTAGACACGTCCAGGAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGGTTTG  270
V  96.6% (256/265)  IGHV4-59*01  206  .....G............A........................C.........................................-----  290
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A        

                                      ----------CDR3-IMGT------------------>                                  
                                      D  Y  D  S  S  G  T  Y  H  V  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13874  271  ACTATGATAGTAGTGGTACTTACCACGTTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  342
D  100.0% (17/17)   IGHD3-22*01  6    .................-------------------------------------------------------  22
J  100.0% (43/43)   IGHJ4*02     6    -----------------------------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35795349


Query= Query_2355

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           290     2e-80
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	GACTAGTGA	GATAGTAGTG	CTTGG	TGCCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAGACTAGTGAGATAGTAGTGCTTGGTGCCTTCGATATG	ARETSEIVVLGAFDM	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	17	7	0	70.8
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	103	11	0	90.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	215	30	0	87.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  R  S  H  S  W  S  W  I  R  Q  P  P  G  K  G  M  E 
                    Query_13875  1    ACCCTGTCCCTCACCTGCAATGTCTCTGGAGACTCCATCAGAAGTCATTCGTGGAGCTGGATCCGGCAGCCCCCGGGGAAGGGAATGGAG  90
V  87.8% (215/245)  IGHV4-59*01  49   ...................C.........T.G.........T...T.C.AC.......................A.........C.....  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  N  V  E  Y  R  G  G  S  N  Y  N  P  S  L  N  S  R  L  T  I  S  V  D  M  S  K  N 
                    Query_13875  91   TGGATTGGAAATGTCGAATACAGGGGAGGCTCCAACTACAACCCCTCCCTCAACAGTCGACTCACCATATCAGTGGACATGTCCAAGAAT  180
V  87.8% (215/245)  IGHV4-59*01  139  ........GT..A..T.T.....T..GA..A......................G......G.............A....C.........C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  P  L  K  L  S  S  V  T  A  A  D  T  A  V  H  Y  C  A  R  E  T  S  E  I  V  V  L  G 
                    Query_13875  181  CAGTTCCCCCTGAAGCTGAGCAGTGTGACCGCGGCGGACACGGCCGTCCATTACTGTGCGAGAGAGACTAGTGAGATAGTAGTGCTTGGT  270
V  87.8% (215/245)  IGHV4-59*01  229  ......T..............TC.........T..............GT................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (10/10)   IGHD3-22*01  11   --------------------------------------------------------------------------..........------  20
J  93.3% (42/45)    IGHJ3*02     4    -----------------------------------------------------------------------------------------.  4

                                      ----------->                                
                                       A  F  D  M  W  G  Q  G  T  M  V  T  V  S  S
                    Query_13875  271  GCCTTCGATATGTGGGGCCAAGGGACAATGGTCACCGTCTCTTC  314
J  93.3% (42/45)    IGHJ3*02     5    ..T..T.....C................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_281936

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           35.3    4e-06
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	C	ACTATGATGGTAGTGGTTATT	CCGTG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGACACTATGATGGTAGTGGTTATTCCGTGAACTGGTTCGACCCC	ARHYDGSGYSVNWFDP	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  N  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13876  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAATAATTACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  94.7% (230/243)  IGHV4-59*01  49   ...............................G........G..G...........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_13876  91   TGGATTGGCTATATCTATTACAGTGGAAGCACCAATTACAACCCCTCCCTCAAGAGTCGAGTCACTATATCAATAGACACGTCCAAGAAC  180
V  94.7% (230/243)  IGHV4-59*01  139  ........G.................G........C.............................C......G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  H  Y  D  G  S  G  Y  S  V 
                    Query_13876  181  CACTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGCGACACTATGATGGTAGTGGTTATTCCGTG  270
V  94.7% (230/243)  IGHV4-59*01  229  ..G................G...........................G............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  95.2% (20/21)    IGHD3-22*01  6    ----------------------------------------------------------------........A............-----  26

                                      -------------->                                  
                                       N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13876  271  AACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (49/49)   IGHJ5*02     3    .................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_268082

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD3-22*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CCCCGCCATTTG	ACTATGAT	CTTGACGTAAGGGGAATCCACA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCCCCGCCATTTGACTATGATCTTGACGTAAGGGGAATCCACAACTTTGACCAC	ARAPPFDYDLDVRGIHNFDH	240	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	246	7	7	0	0	100
Total	N/A	N/A	243	230	13	0	94.7


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_13877  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCAGTACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  94.7% (230/243)  IGHV4-59*01  50   .....TCC...A....C.........................G...............................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  C  I  Y  Y  S  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  S  
                    Query_13877  94   GGATTGGGTGTATCTATTACAGTGGGACCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAGCC  183
V  94.7% (230/243)  IGHV4-59*01  140  .........A.................G.............................................A.............A..  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------------CDR3-IMG
                                      Q  F  S  L  K  L  A  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  P  P  F  D  Y  D  L  D  
                    Query_13877  184  AGTTCTCCCTGAAGCTGGCCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGCCCCGCCATTTGACTATGATCTTGACG  273
V  94.7% (230/243)  IGHV4-59*01  230  .................AG...........................G................---------------------------  292
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (8/8)     IGHD3-22*01  6    ---------------------------------------------------------------------------........-------  13

                                      T------------------------>                                  
                                      V  R  G  I  H  N  F  D  H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13877  274  TAAGGGGAATCCACAACTTTGACCACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
J  97.8% (44/45)    IGHJ4*02     4    ---------------........T....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_268081

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           350     8e-99
IGHD3-22*01                                                                                           41.1    7e-08
IGHJ4*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TCAGCCA	GTATTACTATGATACTAATGGTTATTA	TGGGGAAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTCAGCCAGTATTACTATGATACTAATGGTTATTATGGGGAATACTACTTTGACTAC	ARVSQYYYDTNGYYGEYYFDY	238	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  I  S  V  S  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13878  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTATCTCCGTCAGTAGTTACTACTGGGCCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*02  49   ...................C..........GG......................AG..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  S  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_13878  91   TGGATTGGTTATATCTATTCCAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCTCCATATCTGTAGACACGTCCAAGAAC  180
V  95.9% (234/244)  IGHV4-59*02  139  ........G..........A...........................................A.......A..................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------------------CDR3-I
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  S  Q  Y  Y  Y  D  T  N 
                    Query_13878  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGTCAGCCAGTATTACTATGATACTAAT  270
V  95.9% (234/244)  IGHV4-59*02  229  ...............................................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.6% (25/27)    IGHD3-22*01  1    -----------------------------------------------------------------------..............G..G.  19

                                      MGT-------------------------->                                
                                       G  Y  Y  G  E  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13878  271  GGTTATTATGGGGAATACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  332
D  92.6% (25/27)    IGHD3-22*01  20   ........------------------------------------------------------  27
J  100.0% (46/46)   IGHJ4*02     1    ----------------..............................................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_268080

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           324     8e-91
IGHD3-3*01                                                                                            33.4    1e-05
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	AGCT	CGATTTTTGGACTGGTTATT	TTAGGTA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAAGCTCGATTTTTGGACTGGTTATTTTAGGTAACTTTGACTAC	AGSSIFGLVILGNFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	25	5	0	83.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	101	13	0	88.6
CDR3-IMGT (germline)	244	249	6	5	1	0	83.3
Total	N/A	N/A	249	228	21	0	91.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  A  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_13879  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGAGGCTCCATCAGTAGCAGTGCTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGG  90
V  91.6% (228/249)  IGHV4-39*01  49   .............................T...........C..T...AG.........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  Y  S  G  N  T  Y  Y  N  P  P  L  R  S  R  L  H  M  S  V  D  T  S 
                    Query_13879  91   CTGGAGTGGATTGGGAGTATCTATTATAGTGGGAACACCTACTATAATCCGCCCCTCAGGAGTCGACTCCACATGTCCGTAGACACTTCT  180
V  91.6% (228/249)  IGHV4-39*01  139  ..................................G.........C..C...T......A.......G..AC...A...........G..C  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  S  S  I  F  G  L  V 
                    Query_13879  181  AAGAACCAGTTCTCCCTGAGGCTGACCTCTGTGACCGCCGCAGACACGGCTGTTTATTACTGTGCGGGAAGCTCGATTTTTGGACTGGTT  270
V  91.6% (228/249)  IGHV4-39*01  229  ...................A.....G...........................G............A..---------------------  297
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.0% (19/20)    IGHD3-3*01   7    -------------------------------------------------------------------------...........G.....  23

                                      GT------------------>                                  
                                       I  L  G  N  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13879  271  ATTTTAGGTAACTTTGACTACTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  325
D  95.0% (19/20)    IGHD3-3*01   24   ...----------------------------------------------------  26
J  97.8% (44/45)    IGHJ4*02     4    ----------..................................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_281932

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-53*01                                                                                           371     7e-105
IGHD3-3*01                                                                                            31.5    6e-05 
IGHJ6*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-53*01	IGHD3-3*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTCAGTCGTACCGGCTTTCCGGCAAATTCCCAATC	ACGATTTTTGGAGTGG	CTGACCGACGACAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTCAGTCGTACCGGCTTTCCGGCAAATTCCCAATCACGATTTTTGGAGTGGCTGACCGACGACAAGTACGGTATGGACGTC	ARDLSRTGFPANSQSRFLEWLTDDKYGMDV	240	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	112	2	0	98.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	247	242	5	0	98


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13880  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGGTTCACCGTCAGTAGCAACTACATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  98.0% (242/247)  IGHV3-53*01  47   ..........................................................................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  V  S  S  N  Y  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-----CDR2-IMGT-----><----------------------------------------------------FR
                                      E  W  V  S  V  I  Y  T  G  D  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  K  
                    Query_13880  91   AGTGGGTCTCAGTTATTTATACCGGTGACAGCACATACTACGCAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAATACCAAGA  180
V  98.0% (242/247)  IGHV3-53*01  137  .....................G.....GT......................................................T......  226
                                      E  W  V  S  V  I  Y  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  

                                      3-IMGT----------------------------------------------------><------------------------------
                                      N  M  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  L  S  R  T  G  F  P  
                    Query_13880  181  ACATGCTGTATCTTCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAGAGATCTCAGTCGTACCGGCTTTCCGG  270
V  98.0% (242/247)  IGHV3-53*01  227  ...C...............................................................-----------------------  293
                                      N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                          

                                      ----------CDR3-IMGT--------------------------------------->                               
                                      A  N  S  Q  S  R  F  L  E  W  L  T  D  D  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  
                    Query_13880  271  CAAATTCCCAATCACGATTTTTGGAGTGGCTGACCGACGACAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCT  360
D  100.0% (16/16)   IGHD3-3*01   6    -------------................-------------------------------------------------------------  21
J  100.0% (48/48)   IGHJ6*02     15   --------------------------------------------..............................................  60

                                        
                                      S 
                    Query_13880  361  CA  362
J  100.0% (48/48)   IGHJ6*02     61   ..  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37907169


Query= Query_268086

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_13881  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_13881  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_13881  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_13881  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_281930

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD3-3*01                                                                                            14.1    8.4  
IGHJ4*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCGCAGGGGGTCTATTT	ATTTTTG	TCGCCCCT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGCAGGGGGTCTATTTATTTTTGTCGCCCCTTTTGACTAC	ARGAGGLFIFVAPFDY	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	15	6	0	71.4
FR3-IMGT	124	237	114	104	10	0	91.2
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  I  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13882  1    ACCCTGTCCCTCACCTGCACTATCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.0% (227/244)  IGHV4-59*01  49   .....................G....................................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  F  G  S  G  T  T  D  Y  N  A  S  F  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13882  91   TGGATTGGGTATATCTTCGGCAGTGGGACTACCGATTACAACGCCTCCTTTAAGAGTCGAGTCACCATATCAGTGGACACGTCCAAGAAC  180
V  93.0% (227/244)  IGHV4-59*01  139  ................ATTA........GC...A.C......C.....C.C.......................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  P  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  A  G  G  L  F  I  F  V 
                    Query_13882  181  CAGTTCTCCCTGAAGCCGAGCTCTGTGACCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGCAGGGGGTCTATTTATTTTTGTC  270
V  93.0% (227/244)  IGHV4-59*01  229  ................T...............T...........C..G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-3*01   9    ---------------------------------------------------------------------------------.......--  15

                                      -------------->                                  
                                       A  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13882  271  GCCCCTTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (43/43)   IGHJ4*02     6    ------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_268084

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD2-2*01                                                                                            39.1    2e-07
IGHJ6*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TACG	TTGTAGTAGTACCAGCTGCT	TTTACGAG	ATGGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTACGTTGTAGTAGTACCAGCTGCTTTTACGAGATGGACGTC	ARVRCSSTSCFYEMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  S  H  Y  W  S  W  I  R  Q  P  P  G  K  G  L  Q 
                    Query_13883  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCGACTCCATCAATAGTCACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGCAG  90
V  95.9% (234/244)  IGHV4-59*01  49   .............................T.G........G....T.........................................G..  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  K  N  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13883  91   TGGATTGGCTATATCTATTACAGTGGGAGCACCAAGAACAACCCTTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.9% (234/244)  IGHV4-59*01  139  ........G..........................CT.......C.............................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  V  R  C  S  S  T  S  C  F 
                    Query_13883  181  CAGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGTACGTTGTAGTAGTACCAGCTGCTTT  270
V  95.9% (234/244)  IGHV4-59*01  229  ...............................................G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (20/20)   IGHD2-2*01   7    --------------------------------------------------------------------....................--  26

                                      -------------->                                 
                                       Y  E  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13883  271  TACGAGATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  318
J  100.0% (42/42)   IGHJ6*02     21   ------..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_123780

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           338     4e-95
IGHD1-1*01                                                                                            16.1    2.1  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	AAACA	ACAACTGG	CGC	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACCAGAAAACAACAACTGGCGCAC	TRKQQLAH	249	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	134	30	26	4	0	86.7
FR3-IMGT	135	248	114	109	5	0	95.6
CDR3-IMGT (germline)	249	254	6	5	1	0	83.3
Total	N/A	N/A	254	235	19	0	92.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  C  S  G  F  A  F  A  D  D  A  M  G  W  V  R  Q  A  P  G  K  G  L  
                    Query_13884  1    GGTCCCTGAGACTCTCCTGTACATGTTCTGGATTCGCCTTTGCTGATGATGCTATGGGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  92.5% (235/254)  IGHV3-49*04  47   .......................GC..........A......G....T........A.................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  A  V  I  R  S  K  N  Y  D  G  T  T  E  F  A  A  S  V  K  G  R  F  A  I  S  R  D  
                    Query_13884  91   AGTGGGTAGCCGTCATCAGAAGCAAAAATTATGATGGGACAACAGAATTTGCCGCGTCTGTGAAAGGCAGATTCGCCATCTCAAGAGATG  180
V  92.5% (235/254)  IGHV3-49*04  137  .........GTT....T.........GC.....G..............AC........................A...............  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><-------CDR3-IMGT-----
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  K  Q  Q  L  A  
                    Query_13884  181  ATTCCAAAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAAGACACAGCCGTGTATTATTGTACCAGAAAACAACAACTGGCGC  270
V  92.5% (235/254)  IGHV3-49*04  227  ..............................................G.................C.....T...----------------  300
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R                 
D  100.0% (8/8)     IGHD1-1*01   4    -------------------------------------------------------------------------------........---  11

                                      ->                                  
                                      H  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13884  271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (36/36)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_268089

Length=354
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*03                                                                                           338     5e-95
IGHD3-22*01                                                                                           27.6    8e-04
IGHJ4*01                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*03	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCCCCCT	GTATTACTCTGATTATAGTGGTT	CTC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCCCCCTGTATTACTCTGATTATAGTGGTTCTCACTACTTTGACTCC	ARSPLYYSDYSGSHYFDS	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	17	7	0	70.8
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	232	16	0	93.5


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13885  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGTAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  93.5% (232/248)  IGHV3-30*03  47   ....................................C........G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  E  Y  T  F  Y  T  D  S  V  R  G  R  F  I  M  S  R  D  N  P  
                    Query_13885  91   AGTGGGTGGCAGTTATTTCATATGATGGAGAATATACGTTCTATACAGACTCCGTGAGGGGCCGATTCATCATGTCCAGAGACAATCCCA  180
V  93.5% (232/248)  IGHV3-30*03  137  ................A............AGTA...AA.A....G............A...........C...C............T...  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  N  T  L  Y  L  R  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  S  P  L  Y  Y  S  D  
                    Query_13885  181  AGAACACGCTGTATCTGCGAATGAACAGCCTGAGAGCTGAGGACACGGCTGTGTATTACTGTGCGAGATCCCCCCTGTATTACTCTGATT  270
V  93.5% (232/248)  IGHV3-30*03  227  ..................A.................................................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  87.0% (20/23)    IGHD3-22*01  1    ----------------------------------------------------------------------------........A....A  14

                                      IMGT--------------------->                                
                                      Y  S  G  S  H  Y  F  D  S  W  G  H  G  T  L  V  T  V  S  S
                    Query_13885  271  ATAGTGGTTCTCACTACTTTGACTCCTGGGGCCACGGAACCCTGGTCACCGTCTCCTC  328
D  87.0% (20/23)    IGHD3-22*01  15   G........-------------------------------------------------  23
J  95.7% (44/46)    IGHJ4*01     1    ------------............A.........A.......................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34528257


Query= Query_268088

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           343     2e-96
IGHD3-16*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CATGCTTTCCTCGACTGATATGT	CGTTCGGGGGA	TTTTTGA	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACATGCTTTCCTCGACTGATATGTCGTTCGGGGGATTTTTGATTGACCAG	ARDMLSSTDMSFGGFLIDQ	244	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  N  V  S  G  D  S  I  S  S  R  S  Y  Y  W  G  W  I  R  Q  S  P  G  K  G 
                    Query_13886  1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGACTCCATCAGCAGTAGAAGTTACTACTGGGGCTGGATCCGCCAGTCCCCAGGGAAGGGG  90
V  93.6% (235/251)  IGHV4-39*02  49   ...................C...........G...............T...........................C..............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  Y  Y  S  G  S  T  D  Y  N  P  S  L  E  S  R  V  A  I  S  I  D  T  S 
                    Query_13886  91   CTGGAATGGATTGGGAATATCTATTATAGTGGGAGCACCGACTACAACCCGTCCCTCGAGAGTCGAGTCGCCATATCGATAGACACGTCC  180
V  93.6% (235/251)  IGHV4-39*02  139  .....G..........G......................T.................A...........A.......CG...........  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------------CDR
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  M  L  S  S  T  D 
                    Query_13886  181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACCGCCGCAGACACGGCTATTTATTACTGTGCGAGAGACATGCTTTCCTCGACTGAT  270
V  93.6% (235/251)  IGHV4-39*02  229  ........C............C....C........................G.G.................-------------------  299
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      

                                      3-IMGT----------------------->                                  
                                       M  S  F  G  G  F  L  I  D  Q  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13886  271  ATGTCGTTCGGGGGATTTTTGATTGACCAGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  334
D  90.9% (10/11)    IGHD3-16*01  13   ----....T......-------------------------------------------------  23
J  95.2% (40/42)    IGHJ4*02     7    ----------------------.....T.C..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_152387

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*04                                                                                           294     6e-82
IGHD2-2*01                                                                                            18.0    0.59 
IGHJ6*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*04	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGAGA	ACG	AGTAGTGCCAGC	CCT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGAACGAGTAGTGCCAGCCCTTACTACCACCTCGGCATGGACGTC	VRTSSASPYYHLGMDV	243	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	98	16	0	86
CDR3-IMGT (germline)	243	248	6	5	1	0	83.3
Total	N/A	N/A	248	218	30	0	87.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  S  F  A  M  H  W  V  R  Q  A  P  D  R  G  L  
                    Query_13887  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCGACAGCTTTGCGATGCACTGGGTCCGCCAGGCTCCCGACAGGGGGCTGG  90
V  87.9% (218/248)  IGHV3-30*04  47   .........................................AGT....A...T.......................A.G..A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  S  P  Q  F  Y  A  D  S  V  K  G  R  F  S  V  S  R  D  N  S  
                    Query_13887  91   AGTGGGTGGCAGTTATTTCATATGATGGAAGTCCTCAGTTTTACGCAGACTCCGTGAAGGGCCGCTTCAGCGTCTCCAGAGACAATTCCG  180
V  87.9% (218/248)  IGHV3-30*04  137  ................A...............AA.A.A.AC.......................A....C.A.................A  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      A  N  T  V  S  L  Q  M  N  D  L  R  R  E  D  S  G  V  Y  Y  C  V  R  T  S  S  A  S  P  Y  
                    Query_13887  181  CGAACACGGTGTCTCTGCAAATGAACGACCTGAGACGTGAGGACTCGGGTGTTTATTACTGTGTGAGAACGAGTAGTGCCAGCCCTTACT  270
V  87.9% (218/248)  IGHV3-30*04  227  A.......C...A.............AG.......GC.......A...C...G..........C....----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.7% (11/12)    IGHD2-2*01   11   -----------------------------------------------------------------------......A.....-------  22
J  90.6% (48/53)    IGHJ6*02     6    --------------------------------------------------------------------------------------....  9

                                      T------------------>                             
                                      Y  H  L  G  M  D  V  W  G  Q  G  T  T  V  T  V  S
                    Query_13887  271  ACCACCTCGGCATGGACGTCTGGGGCCAGGGGACCACGGTCACCGTCTC  319
J  90.6% (48/53)    IGHJ6*02     10   ..T..TA...T.................A....................  58


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_281938

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*03                                                                                           428     3e-122
IGHD2-2*02                                                                                            10.3    143   
IGHJ6*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*03	IGHD2-2*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CCTCTAAAACAGGCCCAGAA	ATACC	CGACCCCCG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACCTCTAAAACAGGCCCAGAAATACCCGACCCCCGACTTCGGTATGGACGTC	ARPLKQAQKYPTPDFGMDV	292	348	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	8	78	71	70	1	0	98.6
CDR1-IMGT	79	102	24	22	2	0	91.7
FR2-IMGT	103	153	51	48	3	0	94.1
CDR2-IMGT	154	177	24	24	0	0	100
FR3-IMGT	178	291	114	112	2	0	98.2
CDR3-IMGT (germline)	292	297	6	6	0	0	100
Total	N/A	N/A	290	282	8	0	97.2


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  N  
                    Query_13888  8    TGCAGCTGGTGCAGTCTGGAGCAGAAGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCAATT  97
V  97.2% (282/290)  IGHV5-51*03  5    .........................G.............................................................GC.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  W  I  A  W  V  R  R  L  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  
                    Query_13888  98   ACTGGATCGCCTGGGTGCGCCGGCTGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCC  187
V  97.2% (282/290)  IGHV5-51*03  95   .........G...........A.A..................................................................  184
                                      Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  R  S  I  S  T  A  Y  L  H  W  S  S  L  K  A  S  D  T  
                    Query_13888  188  CGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAGGTCCATCAGCACCGCCTACCTGCACTGGAGCAGCCTGAAGGCCTCGGACACCG  277
V  97.2% (282/290)  IGHV5-51*03  185  ....................................A........................G............................  274
                                      P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  

                                      -------------><-----------------------CDR3-IMGT----------------------->                   
                                      A  M  Y  Y  C  A  R  P  L  K  Q  A  Q  K  Y  P  T  P  D  F  G  M  D  V  W  G  Q  G  T  A  
                    Query_13888  278  CCATGTATTACTGTGCGAGACCTCTAAAACAGGCCCAGAAATACCCGACCCCCGACTTCGGTATGGACGTCTGGGGCCAAGGGACCGCGG  367
V  97.2% (282/290)  IGHV5-51*03  275  ....................----------------------------------------------------------------------  294
                                      A  M  Y  Y  C  A  R                                                                       
D  100.0% (5/5)     IGHD2-2*02   27   ----------------------------------------.....---------------------------------------------  31
J  96.0% (48/50)    IGHJ6*02     13   ------------------------------------------------------...A............................A...  48

                                                    
                                      V  T  V  S  S 
                    Query_13888  368  TCACCGTCTCCTCA  381
J  96.0% (48/50)    IGHJ6*02     49   ..............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_123781

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           336     1e-94
IGHD5-18*01                                                                                           18.0    0.61 
IGHJ5*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGCA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGCAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	233	18	0	92.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  G  G  G  Y  F  W  N  W  I  R  Q  R  P  G  K  G 
                    Query_13889  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCGGTGGTGGTTACTTCTGGAACTGGATCCGCCAGCGCCCAGGGAAGGGC  90
V  92.8% (233/251)  IGHV4-31*03  49   ..........................................A............A.....G..............A.............  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  A  S  T  Q  Y  N  P  S  L  K  G  R  V  T  I  S  A  D  T  S 
                    Query_13889  91   CTAGAGTGGATTGGGAACATCTTTTACAGTGCGAGCACCCAGTACAACCCGTCCCTCAAGGGTCGAGTTACCATATCAGCAGACACGTCT  180
V  92.8% (233/251)  IGHV4-31*03  139  ..G............T......A........G.......T.C..................A..................T..........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                       K  N  Q  F  S  L  K  L  N  S  M  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y 
                    Query_13889  181  AAGAATCAGTTCTCCCTGAAACTGAACTCCATGACTGCCGCGGACACGGCCGTCTATTACTGTGCGAGAGATCCTACCGGCAGTGGATAT  270
V  92.8% (233/251)  IGHV4-31*03  229  .....C..............G....G...TG......................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------------.......C  8

                                      -IMGT--------------------->                                  
                                       N  F  G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13889  271  AACTTTGGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  83.3% (15/18)    IGHD5-18*01  9    .G..A.....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_123782

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           333     1e-93
IGHD3-22*01                                                                                           21.8    0.041
IGHJ3*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD3-22*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	N/A	GTATTACTTTGAGAATAGTG	CCAGCACGTTCGG	TGCTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTATTACTTTGAGAATAGTGCCAGCACGTTCGGTGCTTTTGATATC	ARYYFENSASTFGAFDI	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	125	21	19	2	0	90.5
FR3-IMGT	126	239	114	109	5	0	95.6
CDR3-IMGT (germline)	240	244	5	5	0	0	100
Total	N/A	N/A	241	227	14	0	94.2


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  S  V  S  G  G  S  I  N  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_13890  4    CCCTGAGACTCTCCTGCAGTGTCTCTGGTGGCTCCATCAATAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  94.2% (227/241)  IGHV4-59*08  50   .....TCC...A......C....................G..................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  H  Y  N  G  S  T  N  Y  N  P  S  L  K  S  R  L  I  I  S  V  D  T  S  K  N  
                    Query_13890  94   GGATTGGCTATATCCATTACAATGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGACTCATCATATCAGTAGACACGTCCAAGAACC  183
V  94.2% (227/241)  IGHV4-59*08  140  .......G......T......G.....................................G...C..........................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  L  Y  Y  C  A  R  Y  Y  F  E  N  S  A  S  T  
                    Query_13890  184  AGTTCTCCCTGAAGCTGACCTCTGTGACCGCCGCAGACACGGCCCTATATTACTGTGCGAGGTATTACTTTGAGAATAGTGCCAGCACGT  273
V  94.2% (227/241)  IGHV4-59*08  230  ..................G.........................G.G..............-----------------------------  290
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  85.0% (17/20)    IGHD3-22*01  1    -------------------------------------------------------------........A...T.G.....---------  20

                                      ---------------->                                  
                                      F  G  A  F  D  I  W  G  Q  C  T  M  V  T  V  S  S  
                    Query_13890  274  TCGGTGCTTTTGATATCTGGGGCCAATGCACAATGGTCACCGTCTCTTCAG  324
J  95.7% (45/47)    IGHJ3*02     4    ----......................G.G......................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_269036

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           350     8e-99
IGHD3-22*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GGCATC	ATTACTATGCTAACAGTGATTATT	TCGTAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGGCATCATTACTATGCTAACAGTGATTATTTCGTAGAC	ARGHHYYANSDYFVD	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	237	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  F  S  I  G  S  G  G  Y  Y  W  S  W  V  R  Q  H  P  G  K  G 
                    Query_13891  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGCTTCTCCATCGGCAGTGGTGGTTACTACTGGAGCTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (237/250)  IGHV4-31*03  49   .............................TGG.......A..........................A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  C  I  Y  Y  S  G  S  A  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13891  91   CTGGAGTGGATTGGCTGCATCTATTACAGTGGGAGCGCCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCGGTCGACACGTCT  180
V  94.8% (237/250)  IGHV4-31*03  139  ..............G.A...................A........................................A..A.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  S  A  V  Y  Y  C  A  R  G  H  H  Y  Y  A  N 
                    Query_13891  181  AAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACTGCCGCGGACTCGGCCGTGTATTACTGTGCGAGAGGGCATCATTACTATGCTAAC  270
V  94.8% (237/250)  IGHV4-31*03  229  .....................C...G...................A........................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  83.3% (20/24)    IGHD3-22*01  3    ----------------------------------------------------------------------------.........A..GT  16

                                      ----------------->                                  
                                       S  D  Y  F  V  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13891  271  AGTGATTATTTCGTAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  83.3% (20/24)    IGHD3-22*01  17   ....G.....------------------------------------------  26
J  100.0% (36/36)   IGHJ4*02     13   ----------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_170953

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD2-15*01                                                                                           21.8    0.041
IGHJ3*01                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-15*01	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCAGGG	GGATATAGTAGTGG	CTGCTGCCACCGTTC	TTGCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCAGGGGGATATAGTAGTGGCTGCTGCCACCGTTCTTGCTGTC	ARDQGDIVVAAATVLAV	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	18	3	0	85.7
FR3-IMGT	126	239	114	106	8	0	93
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  M  S  G  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E  
                    Query_13892  4    CCCTGAGACTTTCCTGCACTGTCTCTGGTGGCTCCATGAGTGGTTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAGT  93
V  91.4% (223/244)  IGHV4-59*01  50   .....TCC..CA.........................C...A...A......................C.....................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  H  I  F  Y  S  E  S  T  S  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  A  S  K  K  
                    Query_13892  94   GGATTGGGCATATCTTTTACAGTGAGAGTACCAGCTATAACCCCTCCCTCAAGAGTCGAGTCACTATATCAGTAGACGCGTCCAAGAAGC  183
V  91.4% (223/244)  IGHV4-59*01  140  ........T......A........G...C....A...C..........................C............A..........C.  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  Q  G  D  I  V  V  A  A  
                    Query_13892  184  AGTTCTCCCTGAAGCTGACGTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATCAGGGGGATATAGTAGTGGCTGCTG  273
V  91.4% (223/244)  IGHV4-59*01  230  ..................GC..........................G.................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  92.9% (13/14)    IGHD2-15*01  2    ----------------------------------------------------------------------......T.......------  15

                                      ---------------->                                  
                                      A  T  V  L  A  V  W  G  Q  G  T  K  V  T  V  S  S  
                    Query_13892  274  CCACCGTTCTTGCTGTCTGGGGCCAAGGGACAAAGGTCACCGTCTCTTCAG  324
J  95.2% (40/42)    IGHJ3*01     9    ---------...A....................T.................  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_304149

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           319     2e-89
IGHD3-3*01                                                                                            14.1    8.1  
IGHJ4*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAC	TGC	GGAGTGG	ACTTATG	GACTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTGCGGAGTGGACTTATGGACTCC	ARLRSGLMDS	244	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	47	4	0	92.2
CDR2-IMGT	109	129	21	14	7	0	66.7
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	227	23	0	90.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  N  I  N  S  Y  Y  W  G  W  I  R  Q  P  P  G  N  G 
                    Query_13893  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAACATTAATAGTTACTACTGGGGCTGGATCCGCCAGCCCCCGGGGAACGGA  90
V  90.8% (227/250)  IGHV4-39*01  49   ...............................G........G..G..G.................................A.....G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  L  G  S  V  S  N  S  G  N  T  Y  Y  N  P  S  L  K  R  R  V  T  V  S  V  D  T  S 
                    Query_13893  91   CTGGAGTGGCTTGGGAGTGTCTCGAACAGTGGTAACACCTACTACAACCCGTCCCTCAAGCGTCGGGTCACCGTATCCGTAGACACGTCC  180
V  90.8% (227/250)  IGHV4-39*01  139  .........A........A...ATT.T.....G.G.........................A....A......A.................  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------CDR3-IMGT-------
                                       N  H  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  L  R  S  G  L  M  D 
                    Query_13893  181  AATCATCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCGCAGACACGGCTGTGTATTTCTGTGCGAGACTGCGGAGTGGACTTATGGAC  270
V  90.8% (227/250)  IGHV4-39*01  229  ..GA.C.............A......................................A...........--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (7/7)     IGHD3-3*01   15   -------------------------------------------------------------------------.......----------  21
J  97.5% (39/40)    IGHJ4*02     9    ---------------------------------------------------------------------------------------...  11

                                      -->                                  
                                       S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13893  271  TCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  307
J  97.5% (39/40)    IGHJ4*02     12   .A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_137720

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            310     1e-86
IGHD6-13*01                                                                                           14.1    8.6  
IGHJ5*02                                                                                              98.7    7e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTAGGAC	TAGCACCACCTGG	AGCGGGAACAT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTAGGACTAGCACCACCTGGAGCGGGAACATACAACTGGTTCGACCCC	ARLGLAPPGAGTYNWFDP	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	16	8	0	66.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	223	25	0	89.9


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  L  R  L  S  S  I  W  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13894  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGACTCAGGCTCAGTAGTATTTGGATGAGCTGGGTCCGCCAGGCTCCTGGGAAGGGGCTGG  90
V  89.9% (223/248)  IGHV3-7*01   47   .........................C......T...CCT.T.....CTA...........................A.............  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  H  I  N  Q  D  A  S  D  H  Y  Y  L  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_13894  91   AGTGGGTGGCCCACATAAATCAAGATGCAAGTGACCACTACTATCTGGACTCTGTGAAGGGCCGATTCACCGTCTCCAGAGACAACGCCA  180
V  89.9% (223/248)  IGHV3-7*01   137  ...........A.......G.......G......GA.A......G..........................A..................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  S  S  V  F  L  Q  M  N  S  L  T  A  E  D  T  A  V  Y  Y  C  A  R  L  G  L  A  P  P  G  
                    Query_13894  181  AGAGTTCAGTGTTTCTGCAAATGAACAGCCTGACAGCCGAAGACACGGCTGTTTATTACTGTGCGAGACTAGGACTAGCACCACCTGGAG  270
V  89.9% (223/248)  IGHV3-7*01   227  ...AC...C...A....................G......G...........G...............----------------------  294
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  84.6% (11/13)    IGHD6-13*01  6    ---------------------------------------------------------------------------.....G..G....--  18

                                      IMGT--------------------->                                  
                                      A  G  T  Y  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13894  271  CGGGAACATACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  330
J  100.0% (51/51)   IGHJ5*02     1    ---------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_255257

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           327     9e-92
IGHD3-9*01                                                                                            44.9    5e-09
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-9*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CGACTTCA	TACGATATTTTGACTGGTTATTA	ACAGCTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCGACTTCATACGATATTTTGACTGGTTATTAACAGCTCTTGACTAT	ARGDFIRYFDWLLTALDY	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  K  G  Y  S  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13895  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCGTTCAAAGGTTACTCCTGGACCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  92.7% (227/245)  IGHV4-34*01  49   ...................................C....GT.......A.....G..................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  D  Y  S  G  N  T  D  Y  S  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13895  91   TGGATTGGAGAAATCGATTATAGTGGAAACACCGACTACAGTCCGTCCCTCAAGAGTCGAGTCACCATATCTGTAGACACGTCCAAGAAC  180
V  92.7% (227/245)  IGHV4-34*01  139  ........G......A..C.........G....A......AC.............................A..................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  M  R  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  D  F  I  R  Y  F  D  W 
                    Query_13895  181  CAGTTCTCCCTGAAGATGAGGTCTGTTAGCGCCGCGGACACGGCTGTCTATTACTGTGCGAGAGGCGACTTCATACGATATTTTGACTGG  270
V  92.7% (227/245)  IGHV4-34*01  229  ...............C....C.....G.C..................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (23/23)   IGHD3-9*01   5    -------------------------------------------------------------------------.................  21

                                      -------------------->                                  
                                       L  L  T  A  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13895  271  TTATTAACAGCTCTTGACTATTGGGGCCAGGGAACCCTGGTCACTGTCTCCTCAG  325
D  100.0% (23/23)   IGHD3-9*01   22   ......-------------------------------------------------  27
J  95.2% (40/42)    IGHJ4*02     7    -------------.......C.......................C..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_267509

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           330     1e-92
IGHD5-18*01                                                                                           18.0    0.59 
IGHJ5*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTACCGGGA	GTGGATATAACTTTGGTT	CT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTACCGGGAGTGGATATAACTTTGGTTCTAACTGGTTCGACCCC	ARDPTGSGYNFGSNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	228	17	0	93.1


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  A  S  I  N  H  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13896  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGCCTCCATCAATCATTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  93.1% (228/245)  IGHV4-59*01  49   ...............................G........G.AG..A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  H  Y  S  G  I  T  N  Y  N  P  S  L  K  S  R  A  T  I  S  V  D  T  S  K  S 
                    Query_13896  91   TGGATTGGATATATCCATTACAGTGGCATTACCAACTACAACCCCTCCCTCAAGAGTCGCGCCACCATTTCAGTAGACACGTCCAAGAGC  180
V  93.1% (228/245)  IGHV4-59*01  139  ........G......T..........G.GC.............................A.T......A...................A.  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  A  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  F 
                    Query_13896  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACGCGGCCGTGTATTACTGTGCGAGAGATCCTACCGGGAGTGGATATAACTTT  270
V  93.1% (228/245)  IGHV4-59*01  229  ...................G...................A.........................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  83.3% (15/18)    IGHD5-18*01  1    ----------------------------------------------------------------------------.......C.G..A.  14

                                      -------------------->                                  
                                       G  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13896  271  GGTTCTAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  83.3% (15/18)    IGHD5-18*01  15   ....---------------------------------------------------  18
J  100.0% (49/49)   IGHJ5*02     3    ------.................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_267507

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-7*01                                                                                            358     3e-101
IGHD3-10*01                                                                                           10.3    115   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-7*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GA	TCGGG	ATGGCTCCC	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGGGAGGATCGGGATGGCTCCCTGACTAC	VGGSGWLPDY	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	23	1	0	95.8
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	249	7	5	2	0	71.4
Total	N/A	N/A	249	239	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  S  F  S  N  Y  W  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13897  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAGCTTTAGTAACTATTGGATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.0% (239/249)  IGHV3-7*01   47   ....................................C........G...........G................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  N  I  K  K  D  G  S  E  K  N  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13897  91   AGTGGGTGGCCAACATAAAGAAAGATGGAAGTGAGAAAAACTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.0% (239/249)  IGHV3-7*01   137  ....................C.................T...................................................  226
                                      E  W  V  A  N  I  K  Q  D  G  S  E  K  Y  Y  V  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  S  L  Y  L  Q  M  D  S  L  R  V  E  D  T  A  V  Y  Y  C  V  G  G  S  G  W  L  P  D  
                    Query_13897  181  AGAACTCACTGTATCTGCAGATGGACAGCCTGAGAGTCGAGGACACGGCTGTGTATTACTGTGTGGGAGGATCGGGATGGCTCCCTGACT  270
V  96.0% (239/249)  IGHV3-7*01   227  ...................A...A............C..........................C.A...---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-10*01  14   -----------------------------------------------------------------------.....--------------  18
J  100.0% (41/41)   IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13897  271  ACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  100.0% (41/41)   IGHJ4*02     13   ....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_267506

Length=352
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           329     3e-92
IGHD3-3*01                                                                                            29.5    2e-04
IGHJ4*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TCTGATACAGTCTTT	CGATTTTTGGAGTGG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATCTGATACAGTCTTTCGATTTTTGGAGTGGCTACTTCGACTAC	AKDLIQSFDFWSGYFDY	243	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  Y  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13898  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCAGTTACTATGGCATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  92.0% (230/250)  IGHV3-30*18  47   .....................................C......AG.........G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  S  Y  D  G  V  N  N  H  Y  A  D  S  V  K  G  R  F  A  I  S  R  D  N  D  
                    Query_13898  91   AGTGGGTGGCAGTTATTTCATATGATGGAGTTAATAACCACTATGCAGACTCCGTGAAGGGCCGATTCGCCATCTCCAGAGACAATGACA  180
V  92.0% (230/250)  IGHV3-30*18  137  ................A............AG......AT.............................A.................TC..  226
                                      E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><--------------------CDR3-IM
                                      K  N  K  V  F  L  Q  M  N  S  L  R  V  E  D  T  A  T  Y  Y  C  A  K  D  L  I  Q  S  F  D  
                    Query_13898  181  AGAACAAGGTGTTTCTGCAAATGAACAGCCTGAGAGTTGAGGACACAGCTACTTATTACTGTGCGAAAGATCTGATACAGTCTTTCGATT  270
V  92.0% (230/250)  IGHV3-30*18  227  ......C.C...A.......................C.........G...GTG.................--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (15/15)   IGHD3-3*01   7    -------------------------------------------------------------------------------------.....  11

                                      GT-------------------->                                  
                                      F  W  S  G  Y  F  D  Y  W  G  R  G  T  L  V  T  V  S  S  
                    Query_13898  271  TTTGGAGTGGCTACTTCGACTACTGGGGCCGGGGAACCCTGGTCACCGTCTCCTCAG  327
D  100.0% (15/15)   IGHD3-3*01   12   ..........-----------------------------------------------  21
J  95.7% (45/47)    IGHJ4*02     2    ----------......T.............A..........................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34317075


Query= Query_267505

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           308     4e-86
IGHD3-10*01                                                                                           29.5    2e-04
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGCGA	ATTTCT	TATGGTTCGGGGAGT	CACGGG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAATTTCTTATGGTTCGGGGAGTCACGGGTGGTTCGACCCC	ARISYGSGSHGWFDP	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	45	6	0	88.2
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	243	6	5	1	0	83.3
Total	N/A	N/A	243	220	23	0	90.5


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  K  Y  F  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13899  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAAATACTTCTGGAGTTGGATCCGTCAGCCCCCCGGGAAGGGCCTGGAG  90
V  90.5% (220/243)  IGHV4-59*01  49   ...............................G.........T.GT....A......C........G........A........A......  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  I  G  T  T  G  Y  N  P  S  L  E  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13899  91   TGGATTGGTTACATCTATTACATTGGGACCACCGGCTACAACCCCTCCCTCGAGAGTCGCGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  90.5% (220/243)  IGHV4-59*01  139  ........G..T..........G.....G....AA................A.......A..............................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------CDR3-IMGT------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  R  A  M  Y  Y  C  A  R  I  S  Y  G  S  G  S  H  G 
                    Query_13899  181  CAGTTCTCCCTGAAGCTAACGTCTGTGACCGCTGCGGACAGGGCCATGTATTACTGTGCGCGAATTTCTTATGGTTCGGGGAGTCACGGG  270
V  90.5% (220/243)  IGHV4-59*01  229  .................G.GC...................C....G..............A..---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (15/15)   IGHD3-10*01  8    ---------------------------------------------------------------------...............------  22

                                      ----------->                                  
                                       W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13899  271  TGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (46/46)   IGHJ5*02     6    ..............................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_267504

Length=348
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           347     7e-98
IGHD3-3*01                                                                                            10.3    122  
IGHJ4*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GTCTCTTC	TTTTT	CTCCAAGAGAGAGTCT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGTCTCTTCTTTTTCTCCAAGAGAGAGTCTACTACTTTGACTAC	ARSLLFLQERVYYFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	107	7	0	93.9
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  F  I  K  S  G  G  Y  Y  W  S  W  V  R  Q  H  P  G  K  G 
                    Query_13900  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTTCATCAAGAGTGGTGGCTACTACTGGAGCTGGGTCCGCCAGCACCCAGGGAAGGGC  90
V  94.8% (235/248)  IGHV4-31*03  49   ..................................C.....GC........T...............A.......................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  S  G  T  T  Y  Y  N  A  S  L  K  S  R  V  T  I  S  V  A  T  S 
                    Query_13900  91   CTGGAGTGGATTGGGTACATCTATTACAGTGGGACCACCTACTACAACGCGTCCCTCAAGAGTCGAGTTACAATATCAGTGGCCACGTCT  180
V  94.8% (235/248)  IGHV4-31*03  139  ..................................G.............C......................C........A.A.......  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  S  L  L  F  L  Q  E 
                    Query_13900  181  AAGAACCAGTTCTCCCTGAAGTTGAGTTCTGTGACTGTCGCGGACACGGCCGTGTATTACTGTGCGAGGTCTCTTCTTTTTCTCCAAGAG  270
V  94.8% (235/248)  IGHV4-31*03  229  .....................C....C..........C..............................----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (5/5)     IGHD3-3*01   10   ----------------------------------------------------------------------------.....---------  14

                                      GT------------------>                                  
                                       R  V  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13900  271  AGAGTCTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
J  100.0% (48/48)   IGHJ4*02     1    -------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33894711


Query= Query_267503

Length=388
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-10-1*01                                                                                         402     3e-114
IGHD5-12*01                                                                                           16.1    2.5   
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-10-1*01	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CTTCACAG	TAGTGGCCACG	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACTTCACAGTAGTGGCCACGACTACTTTGACTAC	ARLHSSGHDYFDY	291	329	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	77	74	71	3	0	95.9
CDR1-IMGT	78	101	24	19	5	0	79.2
FR2-IMGT	102	152	51	49	2	0	96.1
CDR2-IMGT	153	176	24	24	0	0	100
FR3-IMGT	177	290	114	106	8	0	93
CDR3-IMGT (germline)	291	296	6	6	0	0	100
Total	N/A	N/A	293	275	18	0	93.9


Alignments

                                        <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                           M  Q  L  V  Q  S  G  A  E  V  K  K  P  G  Q  S  L  R  I  S  C  E  G  S  G  Y  T  F  A  
                    Query_13901    4    AAATGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGCAGTCTCTGAGGATCTCCTGTGAGGGTTCTGGATACACCTTCGCCA  93
V  93.9% (275/293)  IGHV5-10-1*01  2    ..G.........................................G....................A...............G...TA...  91
                                           V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  R  I  S  C  K  G  S  G  Y  S  F  T  

                                        T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                        T  Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  K  I  D  P  S  D  S  Y  T  N  Y  
                    Query_13901    94   CCTATTGGATCAGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGAAAGATTGATCCTAGTGACTCTTATACCAACTACA  183
V  93.9% (275/293)  IGHV5-10-1*01  92   G...C..................................................G.G................................  181
                                        S  Y  W  I  S  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  R  I  D  P  S  D  S  Y  T  N  Y  

                                        ----------------------------------------------FR3-IMGT------------------------------------
                                        S  P  S  F  Q  G  H  V  T  I  S  T  D  N  S  I  T  T  A  Y  L  Q  W  N  S  L  K  A  S  D  
                    Query_13901    184  GCCCGTCCTTCCAAGGCCACGTCACCATCTCAACTGACAATTCCATCACCACTGCCTACCTGCAGTGGAACAGTCTGAAGGCCTCGGACA  273
V  93.9% (275/293)  IGHV5-10-1*01  182  ................................G.......G.......G....................G...C................  271
                                        S  P  S  F  Q  G  H  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                        ----------------><--------------CDR3-IMGT-------------->                                  
                                        T  A  M  Y  Y  C  A  R  L  H  S  S  G  H  D  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13901    274  CAGCCATGTATTATTGCGCGAGACTTCACAGTAGTGGCCACGACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  363
V  93.9% (275/293)  IGHV5-10-1*01  272  .C...........C..T......-------------------------------------------------------------------  294
                                        T  A  M  Y  Y  C  A  R                                                                    
D  90.9% (10/11)    IGHD5-12*01    8    -------------------------------.......T...------------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02       1    ------------------------------------------................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38118351


Query= Query_267502

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            361     4e-102
IGHD1-1*01                                                                                            10.3    114   
IGHJ4*02                                                                                              75.7    5e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GGGAG	GC	TACAA	TA	ACTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGAGGCTACAATAACTTTGACTAC	AGGYNNFDY	241	267	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	27	0	0	100
FR2-IMGT	55	105	51	49	2	0	96.1
CDR2-IMGT	106	126	21	21	0	0	100
FR3-IMGT	127	240	114	110	4	0	96.5
CDR3-IMGT (germline)	241	247	7	6	1	0	85.7
Total	N/A	N/A	247	239	8	0	96.8


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  R  W  V  R  Q  P  P  G  K  G  L 
                    Query_13902  1    ACCCTGTCCCTCACCTGCGCTGTGTCTGGTGGCTCCATCAGCAGTAGTAACTGGTGGAGGTGGGTCCGCCAGCCCCCAGGGAAGGGGCTG  90
V  96.8% (239/247)  IGHV4-4*01   49   .......................C...................................T..............................  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  V  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  T  K 
                    Query_13902  91   GAGTGGATTGGGGTAATCTATCATAGTGGGAGCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGACCAAG  180
V  96.8% (239/247)  IGHV4-4*01   139  .............A......................................................................T.....  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><--------CDR3-IMGT-------->   
                                       N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  G  G  Y  N  N  F  D  Y  W 
                    Query_13902  181  AACCAGTTCTCCCTGAAGCTGACTTCTGTGACCGCCGCGGACACGGCCGTGTATTTCTGTGCGGGAGGCTACAATAACTTTGACTACTGG  270
V  96.8% (239/247)  IGHV4-4*01   229  ......................GC...............................G.......A...-----------------------  295
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (5/5)     IGHD1-1*01   3    ---------------------------------------------------------------------.....----------------  7
J  95.6% (43/45)    IGHJ4*02     4    ----------------------------------------------------------------------------..............  17

                                                                     
                                       G  Q  G  T  L  G  A  V  S  S  
                    Query_13902  271  GGCCAGGGAACCCTGGGCGCCGTCTCCTCAG  301
J  95.6% (43/45)    IGHJ4*02     18   ................T.A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_267501

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           360     1e-101
IGHD1-26*01                                                                                           18.0    0.56  
IGHJ4*02                                                                                              73.7    2e-17 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAGA	AGCA	AGTGGGAGC	CTTA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAAGCAAGTGGGAGCCTTATGACTCC	ARSKWEPYDS	243	272	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	239	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  S  T  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13903  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCAACTTCAGTACCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGG  90
V  96.4% (239/248)  IGHV3-74*01  47   ....................................C........G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      V  W  V  S  R  I  K  S  D  G  S  S  G  T  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13903  91   TGTGGGTCTCACGTATTAAAAGTGATGGGAGTAGCGGAACCTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCA  180
V  96.4% (239/248)  IGHV3-74*01  137  ...................T...............AC..G..................................................  226
                                      V  W  V  S  R  I  N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------CDR3-IMGT--------
                                      K  N  T  L  Y  L  H  M  N  N  L  R  A  E  D  T  A  L  Y  Y  C  A  R  S  K  W  E  P  Y  D  
                    Query_13903  181  AGAACACGCTGTATCTGCACATGAACAATCTGAGAGCCGAGGACACGGCTCTGTATTACTGTGCAAGAAGCAAGTGGGAGCCTTATGACT  270
V  96.4% (239/248)  IGHV3-74*01  227  ...................A.......G......................G.................----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (9/9)     IGHD1-26*01  6    ------------------------------------------------------------------------.........---------  14
J  97.6% (40/41)    IGHJ4*02     8    -------------------------------------------------------------------------------------.....  12

                                      ->                                  
                                      S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13903  271  CCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  306
J  97.6% (40/41)    IGHJ4*02     13   A...................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_267500

Length=323
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           347     7e-98
IGHD1-1*01                                                                                            14.1    7.9  
IGHJ4*02                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TCAAG	N/A	TGGAACG	GGAT	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGTGGAACGGGATACTAC	SSGTGYY	244	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	3	2	0	60
Total	N/A	N/A	248	235	13	0	94.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  D  S  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_13904  1    ACCCTGTCCCTCACCTGCACTGTGTCTGGTGGCTCCATCAGCAGTGATAGTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  94.8% (235/248)  IGHV4-39*01  49   .......................C.....................AG..............G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  H  Y  S  G  S  T  Y  Y  N  A  S  L  T  S  R  V  T  I  S  V  D  T  S 
                    Query_13904  91   CTGGAGTGGATTGGGAGTATCCATTATAGTGGGAGCACCTACTACAACGCGTCCCTCACGAGTCGAGTCACCATATCTGTAGACACGTCC  180
V  94.8% (235/248)  IGHV4-39*01  139  .....................T..........................C.........A..................C............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----CDR3-IMGT----->      
                                       K  N  Q  F  S  L  Q  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  S  S  G  T  G  Y  Y  W  G 
                    Query_13904  181  AAGAACCAGTTCTCCCTGCAGCTGAGTTCTGTGACCGCCGCAGACACGGCTGTGTATTATTGTTCAAGTGGAACGGGATACTACTGGGGC  270
V  94.8% (235/248)  IGHV4-39*01  229  ..................A.......C................................C...G.G..----------------------  296
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  100.0% (7/7)     IGHD1-1*01   9    --------------------------------------------------------------------.......---------------  15
J  100.0% (38/38)   IGHJ4*02     10   -------------------------------------------------------------------------------...........  20

                                                                 
                                       Q  G  T  L  V  T  V  S  S 
                    Query_13904  271  CAGGGAACCCTGGTCACCGTCTCCTCA  297
J  100.0% (38/38)   IGHJ4*02     21   ...........................  47


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31254936


Query= Query_334951

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           350     8e-99
IGHD3-22*01                                                                                           25.7    0.003
IGHJ5*02                                                                                              71.8    8e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GAGGC	AGTAGTGGTTATT	GG	TGGTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTCGACCCC	ARGGSSGYWWFDP	238	276	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	234	10	0	95.9


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  G  Y  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13905  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGTGGTTATTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  95.9% (234/244)  IGHV4-59*01  49   ...............................G..........A....C.......G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  F  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  G  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13905  91   TGGATTGGGTTTATCTATTATAGTGGGAGCACCAACTACAACCCCTCCCTCAAGGGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  95.9% (234/244)  IGHV4-59*01  139  ..........A.........C.................................A...................................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------------CDR3-IMGT---------
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  S  S  G  Y  W  W  F 
                    Query_13905  181  CAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTATTGTGCGAGAGGAGGCAGTAGTGGTTATTGGTGGTTC  270
V  95.9% (234/244)  IGHV4-59*01  229  ...............C...G.................................C..........--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (13/13)   IGHD3-22*01  14   ---------------------------------------------------------------------.............--------  26
J  93.5% (43/46)    IGHJ5*02     6    ------------------------------------------------------------------------------------......  11

                                      ----->                                  
                                       D  P  W  G  Q  A  I  P  V  T  V  S  S  
                    Query_13905  271  GACCCCTGGGGCCAGGCAATCCCGGTCACCGTCTCCTCAG  310
J  93.5% (43/46)    IGHJ5*02     12   ................G..C..T.................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_137725

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           339     2e-95
IGHD6-19*01                                                                                           21.8    0.040
IGHJ5*01                                                                                              73.7    2e-17


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD6-19*01	IGHJ5*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTCTCCCGC	GTATAGTAGTGGCT	ACGG	CTGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCTCCCGCGTATAGTAGTGGCTACGGCTGGTTCGGCTCC	ARDSPAYSSGYGWFGS	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	19	2	0	90.5
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  M  N  T  Y  Y  W  S  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_13906  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATGAATACTTACTACTGGAGTTGGATCCGGCAGACCCCAGGGAAGGGACTGGAG  90
V  94.3% (231/245)  IGHV4-59*01  49   ......................................C.G..G............C............C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  T  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  N 
                    Query_13906  91   TGGATTGGTTATATCTATTACACTGGGAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCACTAGACACGTCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*01  139  ........G.............G.....G...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  F  S  L  T  L  R  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  D  S  P  A  Y  S  S  G  Y 
                    Query_13906  181  CAGTTCTCCCTGACGCTGAGGTCTGTGAGCGCTGCGGACACGGCCGTCTATTATTGTGCGAGAGATTCTCCCGCGTATAGTAGTGGCTAC  270
V  94.3% (231/245)  IGHV4-59*01  229  .............A......C.......C..................G.....C...........-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  92.9% (13/14)    IGHD6-19*01  3    --------------------------------------------------------------------------......C.......--  16

                                      -------------->                                  
                                       G  W  F  G  S  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_13906  271  GGCTGGTTCGGCTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  319
J  93.6% (44/47)    IGHJ5*01     5    --........A............A.....................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_19568

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           413     2e-117
IGHD3-10*01                                                                                           23.8    0.012 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GCGTGTGAA	GGTTCGGGGAATTAT	CCCTTGGCAG	ACTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGCGTGTGAAGGTTCGGGGAATTATCCCTTGGCAGAC	AACEGSGNYPLAD	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	109	5	0	95.6
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	275	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  I  S  C  K  A  S  G  G  T  S  S  S  S
                    Query_13907  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGATCTCCTGCAAGGCTTCTGGAGGCACCTCCAGCAGCTC  90
V  96.2% (275/286)  IGHV1-69*06  6    ..................G.................................G...........................T........A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  D  T  A  N  Y  A  Q
                    Query_13907  91   TGCTATCACCTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGAGGGATCATCCCTATCTTTGATACAGCAAATTACGCACA  180
V  96.2% (275/286)  IGHV1-69*06  96   ........G..............................................................G.........C........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        R  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  D  Y  M  E  L  R  S  L  S  S  E  D  T  A
                    Query_13907  181  GAGGTTCCAGGGCAGAGTCACGATTACCGCGGACAAATCCACGAGCACAGACTACATGGAGCTGCGCAGCCTGAGCTCTGAGGACACGGC  270
V  96.2% (275/286)  IGHV1-69*06  186  ..A...............................................C.............A..........A..............  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  A  C  E  G  S  G  N  Y  P  L  A  D  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13907  271  CGTGTATTACTGTGCGGCGTGTGAAGGTTCGGGGAATTATCCCTTGGCAGACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  96.2% (275/286)  IGHV1-69*06  276  ................----------------------------------------------------------------------  291
                                        V  Y  Y  C  A                                                                       
D  93.3% (14/15)    IGHD3-10*01  11   -------------------------..........G....----------------------------------------------  25
J  100.0% (36/36)   IGHJ4*02     13   --------------------------------------------------....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_176365

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           378     3e-107
IGHD2-21*02                                                                                           23.8    0.011 
IGHJ4*02                                                                                              93.0    3e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-21*02	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CTAC	TGTGGTGCTGACTGC	AA	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCTACTGTGGTGCTGACTGCAAACTACTTTGACTAC	ARATVVLTANYFDY	244	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	113	1	0	99.1
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	246	4	0	98.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 
                    Query_13908  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGATTACTACTGGAGCTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.4% (246/250)  IGHV4-31*03  49   .................................................G........................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  N  I  F  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  L  T  I  S  V  D  T  S 
                    Query_13908  91   CTGGAGTGGATTGGGAACATCTTTTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGACTTACCATATCAGTAGACACGTCT  180
V  98.4% (246/250)  IGHV4-31*03  139  ...............T......A...........................................G.......................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT-
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  A  T  V  V  L  T  A 
                    Query_13908  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGCTACTGTGGTGCTGACTGCA  270
V  98.4% (246/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  93.3% (14/15)    IGHD2-21*02  8    --------------------------------------------------------------------------.......G.......-  22

                                      -------------->                                  
                                       N  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13908  271  AACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  319
J  100.0% (48/48)   IGHJ4*02     1    -................................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_176366

Length=436
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           316     2e-88
IGHD6-13*01                                                                                           31.5    7e-05
IGHJ6*02                                                                                              79.5    5e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD6-13*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	CCCATCCCGAGGAGG	TAGCAGCAGCTGGTAC	CGAAAGGGGC	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCCCATCCCGAGGAGGTAGCAGCAGCTGGTACCGAAAGGGGCACTTCTACGCAATGGATGTC	ASPSRGGSSSWYRKGHFYAMDV	312	377	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	3	77	75	70	5	0	93.3
CDR1-IMGT	78	122	45	19	5	21	42.2
FR2-IMGT	123	173	51	47	4	0	92.2
CDR2-IMGT	174	197	24	16	8	0	66.7
FR3-IMGT	198	311	114	103	11	0	90.4
CDR3-IMGT (germline)	312	316	5	5	0	0	100
Total	N/A	N/A	314	260	33	21	82.8


Alignments

                                      <--------------------------------FR1-IMGT---------------------------------><--------------
                                       Q  M  Q  L  V  Q  S  G  A  E  V  T  K  P  G  S  S  V  K  I  S  C  K  S  S  G  G  T  F  R 
                    Query_13909  3    CAGATGCAGCTGGTGCAGTCTGGAGCTGAGGTGACGAAGCCTGGGTCCTCGGTGAAGATCTCCTGCAAGTCTTCTGGAGGCACCTTCAGG  92
V  82.8% (260/314)  IGHV1-69*01  1    ...G...................G..........A......................G...........G...................C  90
                                       Q  V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S 

                                      ---CDR1-IMGT-----------------><--------------------FR2-IMGT---------------------><-------C
                                       S  S  G  Y  T  F  G  T  Y  A  M  T  W  V  R  Q  A  P  G  Q  G  L  E  W  I  G  G  I  I  A 
                    Query_13909  93   TCTTCTGGATACACCTTCGGAACTTACGCCATGACCTGGGTGCGACAGGCCCCTGGACAAGGGCTCGAGTGGATAGGAGGGATCATCGCC  182
V  82.8% (260/314)  IGHV1-69*01  91   ---------------------.GC..T..T..C.G..............................T........G............C.T  159
                                                            S  Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P 

                                      DR2-IMGT------><----------------------------------------------------FR3-IMGT--------------
                                       I  A  G  I  I  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  A  S  T  G  Y  L  E  V 
                    Query_13909  183  ATCGCTGGTATAATCAACTACGCACAGAAGTTCCAGGGCAGAGTCACGATTACCGCGGACGAATCGGCGAGTACAGGCTACTTGGAGGTG  272
V  82.8% (260/314)  IGHV1-69*01  160  ...TT.....C.GCA..................................................CA....C....C....A.....C..  249
                                       I  F  G  T  A  N  Y  A  Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L 

                                      --------------------------------------><----------------------------CDR3-IMGT-------------
                                       S  S  L  N  S  E  D  T  A  V  Y  Y  C  A  S  P  S  R  G  G  S  S  S  W  Y  R  K  G  H  F 
                    Query_13909  273  AGCAGTCTCAACTCTGAGGACACGGCCGTCTATTACTGTGCGAGCCCATCCCGAGGAGGTAGCAGCAGCTGGTACCGAAAGGGGCACTTC  362
V  82.8% (260/314)  IGHV1-69*01  250  .....C..G.GA.................G..............----------------------------------------------  293
                                       S  S  L  R  S  E  D  T  A  V  Y  Y  C  A                                                 
D  100.0% (16/16)   IGHD6-13*01  6    -----------------------------------------------------------................---------------  21
J  92.5% (49/53)    IGHJ6*02     10   -------------------------------------------------------------------------------------...A.  14

                                      -------------->                                 
                                       Y  A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13909  363  TACGCAATGGATGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  410
J  92.5% (49/53)    IGHJ6*02     15   ....GT.....C....................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 42918336


Query= Query_176367

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           339     2e-95
IGHD5-18*01                                                                                           27.6    8e-04
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	IGHD5-18*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CCCTACCGGAA	GTGGATACAACTATGGT	AAT	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACCCTACCGGAAGTGGATACAACTATGGTAATAACTGGTTCGACCCG	ARDPTGSGYNYGNNWFDP	238	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	231	14	0	94.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  I  V  S  G  A  S  V  S  H  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13910  1    ACCCTGTCCCTCACCTGCATTGTCTCTGGTGCCTCCGTCAGTCATTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  94.3% (231/245)  IGHV4-59*02  49   ...................C...........G..........AG.........................C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  G  G  I  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  I  D  T  S  K  N 
                    Query_13910  91   TGGATTGGATATATCTATTACGGGGGGATCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAATAGACACGTCCAAGAAC  180
V  94.3% (231/245)  IGHV4-59*02  139  ........G............A.T....G...........................................G.................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------------CDR3-IMGT-
                                       Q  F  S  L  R  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  R  D  P  T  G  S  G  Y  N  Y 
                    Query_13910  181  CAGTTCTCCCTGAGGCTGAGCTCTCTGACCGCTGCGGACACGGCCGTTTATTACTGTGCGAGAGACCCTACCGGAAGTGGATACAACTAT  270
V  94.3% (231/245)  IGHV4-59*02  229  .............A..........G......................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD5-18*01  1    ----------------------------------------------------------------------------.........G....  14

                                      -------------------->                                  
                                       G  N  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13910  271  GGTAATAACTGGTTCGACCCGTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  94.1% (16/17)    IGHD5-18*01  15   ...----------------------------------------------------  17
J  98.0% (48/49)    IGHJ5*02     3    ------..............C..................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_176360

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           363     1e-102
IGHD5-18*01                                                                                           39.1    2e-07 
IGHJ4*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	C	GTGGATACAGCTATGGTTAC	T	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGACGTGGATACAGCTATGGTTACTACTACTTTGACTAC	ARRGYSYGYYYFDY	240	281	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	24	0	0	100
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	125	21	21	0	0	100
FR3-IMGT	126	239	114	114	0	0	100
CDR3-IMGT (germline)	240	245	6	5	1	0	83.3
Total	N/A	N/A	242	237	5	0	97.9


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_13911  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGTAGTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  97.9% (237/242)  IGHV4-59*01  50   .....TCC...A..............................................................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  
                    Query_13911  94   GGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAACC  183
V  97.9% (237/242)  IGHV4-59*01  140  ..........................................................................................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------------CDR3-IMGT--------
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  Y  S  Y  G  Y  Y  Y  
                    Query_13911  184  AGTTCTCCCTGAAGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCCAGACGTGGATACAGCTATGGTTACTACTACT  273
V  97.9% (237/242)  IGHV4-59*01  230  ..........................................................G...----------------------------  291
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (20/20)   IGHD5-18*01  1    ---------------------------------------------------------------....................-------  20
J  97.9% (47/48)    IGHJ4*02     1    ------------------------------------------------------------------------------------......  6

                                      ------->                                  
                                      F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13911  274  TTGACTACTGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  315
J  97.9% (47/48)    IGHJ4*02     7    ......................C...................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_176361

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-43*01                                                                                           300     8e-84
IGHD3-3*01                                                                                            18.0    0.58 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-43*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TTCAA	GGAGTTCC	AGTAGTTATTAT	GTCGGGTTGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCAAGGAGTTCCAGTAGTTATTATGTCGGGTTGGACTACTTTGAAAAC	SRSSSSYYVGLDYFEN	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	24	18	3	3	75
FR3-IMGT	126	239	114	105	9	0	92.1
CDR3-IMGT (germline)	240	243	4	3	1	0	75
Total	N/A	N/A	246	221	22	3	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  S  F  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13912  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACGTTCGATGACTATAGTTTCCACTGGGTCCGTCAAGCTCCGGGGAAGGGTCTGG  90
V  89.8% (221/246)  IGHV3-43*01  47   .....................................C..T.....T....CCA.G..................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  T  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  G  W  D  G     T  T  D  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13912  91   AGTGGGTCTCTTTCATTGGTTGGGATGGG---ACCACAGACTATGCAGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACAGCG  177
V  89.8% (221/246)  IGHV3-43*01  137  ...........C.T...A..........TGGT.G....T..................................................A  226
                                      E  W  V  S  L  I  S  W  D  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      D  N  S  L  F  L  Q  M  T  G  L  R  I  E  D  T  A  L  Y  Y  C  S  R  S  S  S  S  Y  Y  V  
                    Query_13912  178  ACAACTCCCTCTTTCTGCAAATGACTGGTCTGAGAATTGAGGACACCGCCTTGTATTACTGTTCAAGGAGTTCCAGTAGTTATTATGTCG  267
V  89.8% (221/246)  IGHV3-43*01  227  .A........G.A...........ACA.........C.........................G...------------------------  292
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  T  E  D  T  A  L  Y  Y  C  A                          
D  91.7% (11/12)    IGHD3-3*01   17   --------------------------------------------------------------------------...G........----  28

                                      T------------------>                                  
                                      G  L  D  Y  F  E  N  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13912  268  GGTTGGACTACTTTGAAAACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  95.8% (46/48)    IGHJ4*02     1    ------..........CT....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_176362

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-74*01                                                                                           343     2e-96
IGHD3-10*01                                                                                           19.9    0.15 
IGHJ6*02                                                                                              87.2    2e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-74*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCA	TTCG	CTATGTTTCGGGG	TTCAGGG	GGTAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCATTCGCTATGTTTCGGGGTTCAGGGGGTATGGACGTC	AFAMFRGSGGMDV	237	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	13	23	11	11	0	0	100
CDR1-IMGT	24	47	24	24	0	0	100
FR2-IMGT	48	98	51	51	0	0	100
CDR2-IMGT	99	122	24	23	1	0	95.8
FR3-IMGT	123	236	114	111	3	0	97.4
CDR3-IMGT (germline)	237	239	3	3	0	0	100
Total	N/A	N/A	227	223	4	0	98.2


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  
                    Query_13913  13   GTGCAGCCTCTGGATTCACCTTCAGTAGCTACTGGATGCACTGGGTCCGCCAAGCTCCAGGGAAGGGGCTGGTGTGGGTCTCACGTATTA  102
V  98.2% (223/227)  IGHV3-74*01  65   ..........................................................................................  154
                                         A  A  S  G  F  T  F  S  S  Y  W  M  H  W  V  R  Q  A  P  G  K  G  L  V  W  V  S  R  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      K  S  D  G  S  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  
                    Query_13913  103  AGAGTGATGGGAGTAGCACATACTACGCGGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGACAACGCCAAGAACACACTGTATCTGC  192
V  98.2% (223/227)  IGHV3-74*01  155  .T..................AG.........................................................G..........  244
                                      N  S  D  G  S  S  T  S  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  K  N  T  L  Y  L  

                                      -------------------------------------------><--------------CDR3-IMGT-------------->       
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  F  A  M  F  R  G  S  G  G  M  D  V  W  G  
                    Query_13913  193  AAATGAACAGTCTGAGAGCCGAGGACACGGCTGTGTATTACTGTGCATTCGCTATGTTTCGGGGTTCAGGGGGTATGGACGTCTGGGGCC  282
V  98.2% (223/227)  IGHV3-74*01  245  ...............................................-------------------------------------------  291
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  92.3% (12/13)    IGHD3-10*01  7    ---------------------------------------------------.....G.......--------------------------  19
J  100.0% (45/45)   IGHJ6*02     18   -----------------------------------------------------------------------...................  36

                                                                
                                      Q  G  T  T  V  T  V  S  S 
                    Query_13913  283  AAGGGACCACGGTCACCGTCTCCTCA  308
J  100.0% (45/45)   IGHJ6*02     37   ..........................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_176363

Length=397
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     6e-118
IGHD1-26*01                                                                                           27.6    9e-04 
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-26*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TGGGGATG	ATAGTGGGAGCTAC	CTT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTC	ARHGDDSGSYLYYFYGMDV	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	105	9	0	92.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  N  Y
                    Query_13914  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGCTTTACCAATTA  90
V  95.5% (278/291)  IGHV5-51*01  6    .................................................................G....................GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  M  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_13914  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATGTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   .........................................................C................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  R  S  L  G  A  S  D  T  A
                    Query_13914  181  GTCTTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTATTTGCAGTGGAGGAGCCTGGGGGCCTCGGACACCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  ...C...C..............................................CC..........C......AA...............  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------------CDR3-IMGT----------------------->                    
                                        I  Y  F  C  A  R  H  G  D  D  S  G  S  Y  L  Y  Y  F  Y  G  M  D  V  W  G  P  G  T  T  V
                    Query_13914  271  CATATATTTCTGTGCGAGACATGGGGATGATAGTGGGAGCTACCTTTACTACTTCTACGGCATGGACGTCTGGGGCCCGGGGACCACGGT  360
V  95.5% (278/291)  IGHV5-51*01  276  ...G....A............---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (14/14)   IGHD1-26*01  4    -----------------------------..............-----------------------------------------------  17
J  93.0% (53/57)    IGHJ6*02     6    ----------------------------------------------.......A......T................AA...........  49

                                                   
                                        T  V  S  S 
                    Query_13914  361  CACCGTCTCCTCA  373
J  93.0% (53/57)    IGHJ6*02     50   .............  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38815848


Query= Query_279107

Length=325
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*02                                                                                           304     9e-85
IGHJ3*02                                                                                              68.0    1e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*02	N/A	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GTCCCA	TGAAG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCAAGAGAGTCCCATGAAGCCTTGGATATC	ARESHEALDI	240	269	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	20	4	0	83.3
FR2-IMGT	54	104	51	47	4	0	92.2
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	107	7	0	93.9
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	219	25	0	89.8


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  D  S  V  S  A  Y  Y  W  T  W  I  R  Q  S  P  G  K  R  L  E  
                    Query_13915  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGACTCCGTCAGTGCTTATTACTGGACCTGGATCCGGCAGTCCCCAGGGAAGAGACTGGAGT  93
V  89.8% (219/244)  IGHV4-59*02  50   .....TCC...A..................G..........AG...C.......G.............C...........G.........  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  A  Y  F  F  H  S  G  N  T  N  Y  N  P  S  L  K  S  R  V  T  V  S  V  D  T  S  K  N  
                    Query_13915  94   GGATTGCGTATTTCTTTCACAGTGGAAACACCAACTACAATCCTTCCCTCAAGAGTCGAGTCACGGTATCAGTAGACACGTCCAAGAACC  183
V  89.8% (219/244)  IGHV4-59*02  140  ......G....A...A.T.......G.G............C..C....................CA........................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><----------CDR3-IMGT--------->    
                                      Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  S  H  E  A  L  D  I  W  
                    Query_13915  184  AGTTCTCCCTTAGGCTGAGCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCAAGAGAGTCCCATGAAGCCTTGGATATCTGGG  273
V  89.8% (219/244)  IGHV4-59*02  230  ..........G.A.................................G...........G.....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  90.0% (45/50)    IGHJ3*02     1    ----------------------------------------------------------------------...T..T..T..........  20

                                                                    
                                      G  P  G  T  M  V  T  V  S  S  
                    Query_13915  274  GCCCAGGGACAATGGTCACCGTGTCTTCAG  303
J  90.0% (45/50)    IGHJ3*02     21   ...A..................C.......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31466118


Query= Query_176368

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           316     2e-88
IGHD2-2*01                                                                                            27.6    7e-04
IGHJ6*02                                                                                              66.1    4e-15


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGAC	TGTAGTAGCACCAGCTG	N/A	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACTGTAGTAGCACCAGCTGCTACTACCAAATGGACGTC	ARVDCSSTSCYYQMDV	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	106	8	0	93
CDR3-IMGT (germline)	238	244	7	7	0	0	100
Total	N/A	N/A	244	223	21	0	91.4


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  N  D  D  Y  W  S  W  I  R  Q  P  P  G  Q  G  L  E 
                    Query_13916  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGGGGCTCCATCAATGATGACTACTGGAGCTGGATCCGGCAGCCCCCCGGGCAGGGACTGGAG  90
V  91.4% (223/244)  IGHV4-59*01  49   .............................T..........G.AG.T............................A...A...........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  V  G  Y  I  Y  Y  R  G  S  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  N  N 
                    Query_13916  91   TGGGTTGGATATATCTATTATAGAGGGAGTACTAAATACAACCCCTCCCTCAAGAGTCGGGTCACCATATCAGTAGACACGTCCAACAAT  180
V  91.4% (223/244)  IGHV4-59*01  139  ...A....G...........C..T.....C..C..C.......................A..........................G..C  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       E  F  S  L  K  L  S  S  V  T  V  A  D  T  A  V  Y  Y  C  A  R  V  D  C  S  S  T  S  C  Y 
                    Query_13916  181  GAGTTCTCCCTGAAGCTGAGCTCTGTGACCGTCGCGGACACGGCCGTCTATTACTGTGCGAGAGTGGACTGTAGTAGCACCAGCTGCTAC  270
V  91.4% (223/244)  IGHV4-59*01  229  C..............................CT..............G................--------------------------  292
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  94.1% (16/17)    IGHD2-2*01   8    ---------------------------------------------------------------------........T........----  24
J  88.5% (46/52)    IGHJ6*02     11   --------------------------------------------------------------------------------------....  14

                                      -------------->                                 
                                       Y  Q  M  D  V  W  G  L  G  T  K  V  I  V  S  S 
                    Query_13916  271  TACCAAATGGACGTCTGGGGCCTAGGGACCAAGGTCATCGTCTCCTCA  318
J  88.5% (46/52)    IGHJ6*02     15   ...GGT................A........C.....C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_137728

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*02                                                                                           350     8e-99
IGHD3-16*01                                                                                           16.1    2.2  
IGHJ2*01                                                                                              100     2e-25


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*02	IGHD3-16*01	IGHJ2*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	C	GGGACTTATGC	CAACTCGCCA	TACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGCGGGACTTATGCCAACTCGCCATACTGGTACTTCGATCTC	ASGTYANSPYWYFDL	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	19	2	0	90.5
FR3-IMGT	130	243	114	108	6	0	94.7
CDR3-IMGT (germline)	244	248	5	5	0	0	100
Total	N/A	N/A	248	236	12	0	95.2


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  G  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 
                    Query_13917  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCATCGGCAGTAGTAGTTACTACTGGGGCTGGATCCGCCAGCCCCCAGGGAAGGGG  90
V  95.2% (236/248)  IGHV4-39*02  49   ...................C...........G.......A..................................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  A  S  I  Y  Y  T  G  S  A  Y  H  N  P  S  L  K  S  R  V  T  M  S  V  D  T  S 
                    Query_13917  91   CTGGAGTGGATTGCGAGTATCTATTATACTGGGAGCGCCTACCACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCCGTAGACACGTCC  180
V  95.2% (236/248)  IGHV4-39*02  139  .............G..............G.......A.....T...............................A...............  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       N  N  H  F  S  L  Q  L  S  S  V  T  D  A  D  T  A  V  Y  Y  C  A  S  G  T  Y  A  N  S  P 
                    Query_13917  181  AACAACCACTTCTCCCTGCAGCTGAGCTCTGTGACCGACGCAGACACGGCTGTCTATTACTGTGCGAGCGGGACTTATGCCAACTCGCCA  270
V  95.2% (236/248)  IGHV4-39*02  229  ..G...............A..................C...............G..............----------------------  296
                                       K  N  H  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                         
D  90.9% (10/11)    IGHD3-16*01  20   ---------------------------------------------------------------------....G......----------  30

                                      ----------------->                                  
                                       Y  W  Y  F  D  L  W  G  R  G  T  L  V  T  V  S  S  
                    Query_13917  271  TACTGGTACTTCGATCTCTGGGGCCGTGGCACCCTGGTCACTGTCTCCTCAG  322
J  100.0% (52/52)   IGHJ2*01     2    ....................................................  53


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_350098

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-11*05                                                                                           339     2e-95
IGHD1-20*01                                                                                           10.3    121  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-11*05	IGHD1-20*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TTCCCTTCCAAAAGTACGAAA	GGTAT	N/A	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTTCCCTTCCAAAAGTACGAAAGGTATTACTTTGACTCT	ARVPFQKYERYYFDS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	249	7	7	0	0	100
Total	N/A	N/A	249	233	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  I  F  S  D  Y  Y  M  T  W  I  R  Q  A  P  G  K  G  L  
                    Query_13918  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCATCTTCAGTGACTACTATATGACGTGGATCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.6% (233/249)  IGHV3-11*05  47   ....................................C...............C....GC...............................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  Y  M  S  W  I  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  F  I  T  A  S  S  I  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  
                    Query_13918  91   AGTGGGTTTCATTCATTACTGCTAGTAGTATTTACACAAACTACGCAGACTCTGTGAAGGGCCGATTCACCATTTCCAGAGACAACGCCA  180
V  93.6% (233/249)  IGHV3-11*05  137  ............A.....G.AG........G..........................................C................  226
                                      E  W  V  S  Y  I  S  S  S  S  S  Y  T  N  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  I  Y  Y  C  A  R  V  P  F  Q  K  Y  E  
                    Query_13918  181  AGAATTCACTATATCTCCAGATGAACAGCCTGAGAGCCGAGGACACGGCCATCTATTACTGTGCGAGAGTTCCCTTCCAAAAGTACGAAA  270
V  93.6% (233/249)  IGHV3-11*05  227  ....C.....G.....G..A..............................G.G................---------------------  295
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       

                                      ---------------->                                  
                                      R  Y  Y  F  D  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13918  271  GGTATTACTTTGACTCTTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (5/5)     IGHD1-20*01  1    .....----------------------------------------------  5
J  95.7% (44/46)    IGHJ4*02     3    -----..........AC..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_196968

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           300     8e-84
IGHD4-17*01                                                                                           23.8    0.011
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD4-17*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCTTGGGTTTAA	TGACTACGGTGA	GGATGCACTC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCTTGGGTTTAATGACTACGGTGAGGATGCACTCGACTAC	ARDLGFNDYGEDALDY	240	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	45	6	0	88.2
CDR2-IMGT	105	125	21	17	4	0	81
FR3-IMGT	126	239	114	104	10	0	91.2
CDR3-IMGT (germline)	240	247	8	8	0	0	100
Total	N/A	N/A	244	218	26	0	89.3


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  Q  
                    Query_13919  4    CCCTGAGACTCTCCTGCACAGTCTCTGGTGGCTCCATCAGTAGTTATTACTGGAGTTGGATCCGGCAGTCCCCAGGGAAGGGACTGCAAT  93
V  89.3% (218/244)  IGHV4-59*01  50   .....TCC...A.......T..........................C........C............C.................G.G.  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  L  G  Y  I  Y  D  R  G  N  T  K  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N  
                    Query_13919  94   GGCTTGGATATATTTATGACAGGGGGAACACCAAGTACAACCCCTCCCTGAAGAGTCGAGTAAGCATATCAGTGGACACGTCCAAGAACC  183
V  89.3% (218/244)  IGHV4-59*01  140  ..A....G.....C...T....T....G......C..............C...........C.C.........A................  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------------CDR3-IMGT-----
                                      Q  V  S  L  S  L  N  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  L  G  F  N  D  Y  G  E  
                    Query_13919  184  AGGTCTCCCTGAGTCTTAACTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGAGATCTTGGGTTTAATGACTACGGTGAGG  273
V  89.3% (218/244)  IGHV4-59*01  230  ..T.........AG..G.G.............................................--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
D  100.0% (12/12)   IGHD4-17*01  1    ----------------------------------------------------------------------------............--  12

                                      ------------->                                  
                                      D  A  L  D  Y  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_13919  274  ATGCACTCGACTACTGGGGCCAGGGAATCTTGGTCACCGTCTCTTCAG  321
J  92.5% (37/40)    IGHJ4*02     9    --------...................C.C.............C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_123487

Length=333
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  T  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_13920  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCACCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.0% (227/244)  IGHV4-59*01  50   .....TCC...A........................T.A...G...........G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N  
                    Query_13920  94   GGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACC  183
V  93.0% (227/244)  IGHV4-59*01  140  .......G..................A...............C...................................C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D  
                    Query_13920  184  AGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGACG  273
V  93.0% (227/244)  IGHV4-59*01  230  ........C....G.....C..........................G...........G.....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  94.8% (55/58)    IGHJ6*02     5    -------------------------------------------------------------------.....AC................  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_13920  274  TCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  308
J  94.8% (55/58)    IGHJ6*02     28   ........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32310846


Query= Query_123485

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHD6-13*01                                                                                           14.1    9.6   
IGHJ4*02                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CAGGTACCTGGGGCCCCG	GCAGCAG	GCCACAGAAAA	TGACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTAC	ARHRYLGPRQQATENDY	284	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	111	3	0	97.4
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	278	13	0	95.5


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  D  S  L  K  I  S  C  Q  G  S  G  Y  T  F  S  T  Y
                    Query_13921  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGATTCTCTGAAGATCTCCTGTCAGGGTTCTGGATACACCTTTTCCACCTA  90
V  95.5% (278/291)  IGHV5-51*01  6    ..........................................G..................A...............G....A...G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  W  L  G  V  I  Y  P  G  D  S  D  A  R  Y  S  P
                    Query_13921  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGTTGGGAGTCATCTATCCTGGTGACTCTGATGCCAGATACAGCCC  180
V  95.5% (278/291)  IGHV5-51*01  96   ........G.....................................A....GA.......................A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  F  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  P  A
                    Query_13921  181  GTCCTTCCAAGGCCAGGTCACCTTCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACCCCGC  270
V  95.5% (278/291)  IGHV5-51*01  186  ......................A...........................................C..................A....  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------------CDR3-IMGT-------------------->                          
                                        M  Y  Y  C  A  R  H  R  Y  L  G  P  R  Q  Q  A  T  E  N  D  Y  W  G  Q  G  T  L  V  T  V
                    Query_13921  271  CATGTATTACTGTGCGAGACACAGGTACCTGGGGCCCCGGCAGCAGGCCACAGAAAATGACTACTGGGGCCAGGGAACCCTGGTCACCGT  360
V  95.5% (278/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (7/7)     IGHD6-13*01  8    ---------------------------------------.......--------------------------------------------  14
J  100.0% (41/41)   IGHJ4*02     8    ---------------------------------------------------------.................................  40

                                              
                                        S  S  
                    Query_13921  361  CTCCTCAG  368
J  100.0% (41/41)   IGHJ4*02     41   ........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_123484

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           344     6e-97
IGHD6-13*01                                                                                           19.9    0.15 
IGHJ5*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD6-13*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTGA	CCCCCT	TAGGAGCACCTGGTAC	CTACCCCGGGAGGGTCT	CCTGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGACCCCCTTAGGAGCACCTGGTACCTACCCCGGGAGGGTCTCC	VTPLGAPGTYPGRVS	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	246	4	3	1	0	75
Total	N/A	N/A	246	233	13	0	94.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  F  A  A  S  G  F  T  F  S  T  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13922  1    GGTCCCTGAGACTCTCCTTTGCAGCCTCTGGATTCACCTTTAGCACCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  94.7% (233/246)  IGHV3-23*01  47   ..................G..........................G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  L  F  S  G  S  G  G  D  T  Y  Y  A  D  S  V  R  G  R  F  T  I  S  R  D  D  S  
                    Query_13922  91   AGTGGGTCTCACTTTTTAGTGGTAGTGGTGGTGACACATACTACGCAGACTCCGTGAGGGGCCGGTTCACCATCTCCAGAGACGATTCCA  180
V  94.7% (233/246)  IGHV3-23*01  137  ...........GC.A.................AG.......................A.........................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  F  Y  C  V  T  P  L  G  A  P  G  T  
                    Query_13922  181  AGAACACGCTGTATTTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCCGTGTTTTACTGTGTGACCCCCTTAGGAGCACCTGGTACCT  270
V  94.7% (233/246)  IGHV3-23*01  227  ..............C.....................................A.A........C..------------------------  292
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  87.5% (14/16)    IGHD6-13*01  6    ------------------------------------------------------------------------...C....G.......--  21

                                      ---------------->                                  
                                      Y  P  G  R  V  S  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13922  271  ACCCCGGGAGGGTCTCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
J  100.0% (36/36)   IGHJ5*02     16   ---------------....................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_123483

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           226     3e-61
IGHD2-21*02                                                                                           14.1    8.5  
IGHJ6*02                                                                                              93.0    4e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-21*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	CACTGAGAGGGGAGGCC	GACGGCTATT	TT	TACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGACACTGAGAGGGGAGGCCGACGGCTATTTTTACTACGGTATGGACGTC	ATLRGEADGYFYYGMDV	240	290	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	20	6	0	76.9
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	42	9	0	82.4
CDR2-IMGT	105	125	21	16	5	0	76.2
FR3-IMGT	126	239	114	91	23	0	79.8
CDR3-IMGT (germline)	240	243	4	4	0	0	100
Total	N/A	N/A	240	192	48	0	80


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  Y  N  W  S  S  S  G  Y  Y  W  N  W  V  R  Q  R  P  G  Q  G  L  E  
                    Query_13923  4    CCCTGAGACTCTCCTGCACTGTCTACAATTGGTCCTCCAGTGGTTACTATTGGAACTGGGTACGGCAGCGCCCCGGTCAGGGGCTGGAGT  93
V  80.0% (192/240)  IGHV4-34*01  50   .....TCC...A.....G.......TGG.G......T............C....G....A.C..C....C...A..GA............  139
                                         L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  E  I  S  H  S  G  S  T  W  Y  N  P  T  L  E  G  R  A  T  I  S  V  G  R  S  N  N  
                    Query_13923  94   GGATTGGCGAAATCAGTCATAGTGGGTCCACGTGGTATAATCCGACCCTCGAGGGTCGAGCCACCATATCAGTGGGCAGGTCCAACAATG  183
V  80.0% (192/240)  IGHV4-34*01  140  .......G.......A.........AAG...CAAC..C..C...T.....A..A......T............A.A..C......G..CC  229
                                      W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><--------------------CDR3-IMGT----
                                      V  F  S  L  R  L  T  S  V  T  A  A  D  T  S  V  Y  Y  C  A  T  L  R  G  E  A  D  G  Y  F  
                    Query_13923  184  TCTTCTCCCTGAGGTTGACCTCCGTGACCGCCGCGGACACGTCTGTCTATTACTGTGCGACACTGAGAGGGGAGGCCGACGGCTATTTTT  273
V  80.0% (192/240)  IGHV4-34*01  230  AG..........A.C...G...T..................G....G.............------------------------------  289
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                                
D  90.0% (9/10)     IGHD2-21*02  17   -----------------------------------------------------------------------------...T......---  26
J  98.0% (50/51)    IGHJ6*02     12   -----------------------------------------------------------------------------------------.  12

                                      ---------------->                                 
                                      Y  Y  G  M  D  V  W  G  Q  G  T  P  V  T  V  S  S 
                    Query_13923  274  ACTACGGTATGGACGTCTGGGGCCAAGGGACCCCGGTCACCGTCTCCTCA  323
J  98.0% (50/51)    IGHJ6*02     13   ................................A.................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_123482

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           291     6e-81
IGHD3-22*01                                                                                           23.8    0.011
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-22*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CAAATGAAGTGGTTCTT	CTATGATAGTGGTGG	CATCTC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCAAATGAAGTGGTTCTTCTATGATAGTGGTGGCATCTCCAACTGGTTCGACCCC	AQMKWFFYDSGGISNWFDP	238	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	19	5	0	79.2
FR2-IMGT	52	102	51	46	5	0	90.2
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	213	27	0	88.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  G  S  I  S  T  S  Y  W  I  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13924  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGGCTCCATCAGCACGTCCTATTGGATCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAA  90
V  88.8% (213/240)  IGHV4-59*01  49   ..................A......................T.GT.A...C....G.............C...................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  M  F  D  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S  K  R 
                    Query_13924  91   TGGATTGCCTATATGTTCGACAGTGGGAGCACCAATTATAACCCCTCCCTGAAGAGTCGAGTCACCATATCACTGGACACGTCCAAGAGA  180
V  88.8% (213/240)  IGHV4-59*01  139  .......GG.....C.ATT................C..C...........C.....................G.A.............AC  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------------------CDR3-IMGT
                                       H  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  Q  M  K  W  F  F  Y  D  S  G 
                    Query_13924  181  CACTTCTCCCTGAAACTGACCTCTGTGACCGCCGCGGACACGGCCGTTTATTACTGTGCGCAAATGAAGTGGTTCTTCTATGATAGTGGT  270
V  88.8% (213/240)  IGHV4-59*01  229  ..G...........G....G............T..............G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  93.3% (14/15)    IGHD3-22*01  7    -----------------------------------------------------------------------------..........A..  19

                                      ----------------------->                                  
                                       G  I  S  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13924  271  GGCATCTCCAACTGGTTCGACCCCTGGGGCCAGGGCACCCTGGTCACCGTCTCGTCAG  328
D  93.3% (14/15)    IGHD3-22*01  20   ..--------------------------------------------------------  21
J  96.0% (48/50)    IGHJ5*02     2    --------...........................A.................C....  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_123481

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         377     9e-107
IGHD3-10*01                                                                                           12.2    32    
IGHJ6*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CCAGA	ATGTACGTACATAAA	GGGGAG	GC	TATGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAATGTACGTACATAAAGGGGAGGCTATGGACGTC	ARMYVHKGEAMDV	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	51	0	0	100
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	249	6	6	0	0	100
Total	N/A	N/A	249	245	4	0	98.4


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_13925    1    ACCCTGTCCCTCACCTGCGCTGTCTCTGGTGGCTCCATCAGTAGTGGTGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  98.4% (245/249)  IGHV4-30-4*01  49   ..................A......................C.......A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13925    91   CTGGAGTGGATTGGGTACATCTACTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCC  180
V  98.4% (245/249)  IGHV4-30-4*01  139  .......................T..................................................................  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  M  Y  V  H  K  G  E 
                    Query_13925    181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTACTGTGCCAGAATGTACGTACATAAAGGGGAG  270
V  98.4% (245/249)  IGHV4-30-4*01  229  .....................................................................---------------------  297
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (6/6)     IGHD3-10*01    16   ------------------------------------------------------------------------------------......  21

                                        ----------->                                 
                                         A  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13925    271  GCTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  315
J  100.0% (43/43)   IGHJ6*02       20   --...........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_334956

Length=391
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     6e-119
IGHJ6*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	N/A	N/A	ATCAAGCGATGGCCGGACCAAG	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTC	VRQSSDGRTKYGMDV	289	333	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	75	74	73	1	0	98.6
CDR1-IMGT	76	99	24	21	3	0	87.5
FR2-IMGT	100	150	51	50	1	0	98
CDR2-IMGT	151	174	24	21	3	0	87.5
FR3-IMGT	175	288	114	109	5	0	95.6
CDR3-IMGT (germline)	289	296	8	7	1	0	87.5
Total	N/A	N/A	295	281	14	0	95.3


Alignments

                                      <--------------------------------FR1-IMGT--------------------------------><-------CDR1-IMG
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  D  F  T  
                    Query_13926  2    AGGTGCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACGACTTTACCA  91
V  95.3% (281/295)  IGHV5-51*01  2    ........................................C.......................................AG........  91
                                         V  Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  

                                      T------><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><------
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  T  G  L  E  W  M  G  I  I  F  P  D  D  S  D  T  R  Y  
                    Query_13926  92   GTTACTGGATCGGCTGGGTGCGCCAGATGCCCGGGACAGGCCTGGAGTGGATGGGGATCATCTTTCCGGATGACTCTGATACCAGATACA  181
V  95.3% (281/295)  IGHV5-51*01  92   .C..................................A..........................A...T.G....................  181
                                      S  Y  W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  

                                      ----------------------------------------------FR3-IMGT------------------------------------
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  T  T  A  Y  L  Q  W  S  S  L  K  A  S  D  
                    Query_13926  182  GCCCGTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCACCACCGCCTACCTGCAGTGGAGTAGCCTGAAGGCCTCGGACC  271
V  95.3% (281/295)  IGHV5-51*01  182  ................................................G.....................C..................A  271
                                      S  P  S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  

                                      ----------------><-----------------CDR3-IMGT----------------->                           
                                      P  A  K  Y  Y  C  V  R  Q  S  S  D  G  R  T  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V 
                    Query_13926  272  CCGCCAAGTATTATTGTGTGAGACAATCAAGCGATGGCCGGACCAAGTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTC  360
V  95.3% (281/295)  IGHV5-51*01  272  ......T......C....C......----------------------------------------------------------------  296
                                      T  A  M  Y  Y  C  A  R                                                                   
J  100.0% (42/42)   IGHJ6*02     15   -----------------------------------------------..........................................  56


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38435124


Query= Query_123488

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           209     4e-56
IGHD2-15*01                                                                                           10.3    119  
IGHJ5*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-15*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	ACATAATCCT	GCTGC	CAGAGGGGC	CAACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGACATAATCCTGCTGCCAGAGGGGCCAACTGGTTCGACCTC	ARGHNPAARGANWFDL	235	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	24	3	0	88.9
CDR1-IMGT	28	48	24	14	7	3	58.3
FR2-IMGT	49	99	51	33	18	0	64.7
CDR2-IMGT	100	120	21	18	3	0	85.7
FR3-IMGT	121	234	114	95	19	0	83.3
CDR3-IMGT (germline)	235	242	8	7	1	0	87.5
Total	N/A	N/A	245	191	51	3	78


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  D  F  Y  G  G  G  F     Y  F  F  S  E  W  V  R  P  T  P  R  E  G  G  G 
                    Query_13927  1    ACCCTGTCCCTCACCTGCGATTTTTATGGCGGGGGCTT---TTATTTCTTCTCGGAATGGGTTCGCCCCACCCCCCGGGAGGGGGGGGGG  87
V  78.0% (191/245)  IGHV4-34*01  49   ...................C.G.C.....T...TC...CAG.GG..A..A..G.AGC...A.C....AGC....AG..A.....CT..A.  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       G  I  A  E  I  N  R  A  G  S  T  N  F  N  P  S  L  E  S  R  L  T  I  S  V  D  T  S  T  K 
                    Query_13927  88   GGGATTGCAGAAATCAATCGTGCTGGAAGCACCAACTTCAATCCGTCCCTCGAGAGTCGACTCACCATTTCAGTGGACACGTCCACGAAG  177
V  78.0% (191/245)  IGHV4-34*01  139  T......GG..........A.AG..............A...C.........A........G.......A.....A..........A...C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       R  F  S  L  R  L  N  S  L  N  A  A  D  T  G  V  Y  Y  C  A  R  G  H  N  P  A  A  R  G  A 
                    Query_13927  178  CGATTCTCCCTGAGGCTAAATTCTCTTAACGCCGCAGACACGGGTGTGTATTACTGTGCGCGAGGACATAATCCTGCTGCCAGAGGGGCC  267
V  78.0% (191/245)  IGHV4-34*01  229  .AG..........A...G.GC...G.G.C......G.......C................A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (5/5)     IGHD2-15*01  21   ---------------------------------------------------------------------------.....----------  25
J  96.0% (48/50)    IGHJ5*02     2    -----------------------------------------------------------------------------------------.  2

                                      -------------->                                  
                                       N  W  F  D  L  W  G  Q  G  S  L  V  T  V  S  S  
                    Query_13927  268  AACTGGTTCGACCTCTGGGGCCAGGGATCCCTGGTCACCGTCTCCTCAG  316
J  96.0% (48/50)    IGHJ5*02     3    .............C.............A.....................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_122750

Length=392
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           277     1e-76
IGHD3-16*02                                                                                           27.6    9e-04
IGHJ3*01                                                                                              62.2    7e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-16*02	IGHJ3*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCTTCTTATCGAAGATCCCAACTAT	GTTTGGGGGAGTTTTCG	CCGCAATCACAATTGCTATAC	TGTCT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCTTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTC	ARGLLIEDPNYVWGSFRRNHNCYTV	261	335	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	74	24	21	3	0	87.5
FR2-IMGT	75	125	51	40	11	0	78.4
CDR2-IMGT	126	146	21	16	5	0	76.2
FR3-IMGT	147	260	114	92	22	0	80.7
CDR3-IMGT (germline)	261	267	7	7	0	0	100
Total	N/A	N/A	267	222	45	0	83.1


Alignments

                                      <--------------------FR1-IMGT--------------------><-------CDR1-IMGT------><---------------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  S  V  S  G  D  S  I  G  T  Y  Y  W  H  W  L  R  
                    Query_13928  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCACTCACCTGCTCTGTGTCTGGTGACTCCATCGGTACTTACTACTGGCACTGGTTGCGGC  90
V  83.1% (222/267)  IGHV4-59*01  26   ................T..............C.........A....C.......G.......A...G..........AG....A.C....  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  

                                      -----FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------------
                                      Q  P  P  G  R  R  L  E  W  L  G  F  F  L  S  T  G  S  T  H  Y  N  P  S  V  R  S  R  V  T  
                    Query_13928  91   AGCCTCCAGGGAGGAGACTGGAGTGGCTTGGCTTCTTCTTATCCACTGGGAGCACCCACTACAACCCCTCCGTCAGGAGTCGTGTCACCC  180
V  83.1% (222/267)  IGHV4-59*01  116  ....C.......A.G...........A....G.ATA...AT.A..G..........A..............C...A......A......A  205
                                      Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  

                                      -------------------FR3-IMGT----------------------------------------------------><---------
                                      L  S  G  D  M  S  R  N  Q  L  S  L  N  L  I  E  V  T  A  A  D  T  A  T  Y  F  C  A  R  G  
                    Query_13928  181  TGTCAGGAGACATGTCTAGGAATCAGTTGTCTCTCAACCTGATCGAAGTGACCGCTGCGGACACGGCCACGTATTTCTGTGCGAGAGGTC  270
V  83.1% (222/267)  IGHV4-59*01  206  .A....T.....C...C.A...C.....C..C..G..G....G.TCT.....................GT.....A...........---  292
                                      I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R     

                                      -----------------------CDR3-IMGT-------------------------------->                         
                                      L  L  I  E  D  P  N  Y  V  W  G  S  F  R  R  N  H  N  C  Y  T  V  W  G  Q  G  T  P  V  T  
                    Query_13928  271  TTCTTATCGAAGATCCCAACTATGTTTGGGGGAGTTTTCGCCGCAATCACAATTGCTATACTGTCTGGGGCCAAGGGACACCGGTCACCG  360
D  94.1% (16/17)    IGHD3-16*02  14   -----------------------.............A...--------------------------------------------------  30
J  94.7% (36/38)    IGHJ3*01     13   -------------------------------------------------------------...................AT........  41

                                               
                                      V  S  S  
                    Query_13928  361  TCTCTTCAG  369
J  94.7% (36/38)    IGHJ3*01     42   .........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38540715


Query= Query_122751

Length=350
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           352     3e-99
IGHD2-2*01                                                                                            14.1    8.6  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GTCCCCA	CTATGCC	TATGCCGGCGGGGGATATG	TTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGTCCCCACTATGCCTATGCCGGCGGGGGATATGTTGAATCC	ARGPHYAYAGGGYVES	246	293	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	30	0	0	100
FR2-IMGT	60	110	51	48	3	0	94.1
CDR2-IMGT	111	131	21	21	0	0	100
FR3-IMGT	132	245	114	109	5	0	95.6
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	237	12	0	95.2


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  T  W  I  R  Q  H  P  G  K  A  
                    Query_13929  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCATCAGCAGTGGTGGTTACTACTGGACCTGGATCCGCCAGCACCCAGGGAAGGCCC  93
V  95.2% (237/249)  IGHV4-31*03  50   .....TCC...A................................................G..........................G..  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      P  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  I  I  S  V  D  T  S  
                    Query_13929  94   CGGAGTGGATTGGGTACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTCATCATATCAGTAGACACGTCTA  183
V  95.2% (237/249)  IGHV4-31*03  140  T..................................................................T.C....................  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><-------------------CDR3-IMG
                                      K  N  Q  F  S  L  K  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  P  H  Y  A  Y  A  
                    Query_13929  184  AAAACCAGTTCTCCCTGAAGCTGAGGTCTGTGACTGCCGCGGACACGGCCGTATATTACTGTGCGAGAGGTCCCCACTATGCCTATGCCG  273
V  95.2% (237/249)  IGHV4-31*03  230  .G.......................C..........................G................---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (7/7)     IGHD2-2*01   25   ----------------------------------------------------------------------------.......-------  31

                                      T------------------>                                  
                                      G  G  G  Y  V  E  S  W  G  Q  G  T  P  V  T  V  S  S  
                    Query_13929  274  GCGGGGGATATGTTGAATCCTGGGGCCAGGGAACCCCGGTCACCGTCTCCTCAG  327
J  92.9% (39/42)    IGHJ4*02     7    ------------....C.A.................T.................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34105893


Query= Query_122752

Length=347
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           382     3e-108
IGHD3-10*01                                                                                           41.1    7e-08 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	GCCAC	TATTATTATGGTTCGGGGAGTTAT	N/A	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACTATTATTATGGTTCGGGGAGTTATTTTGACTAC	ARGHYYYGSGSYFDY	244	288	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	29	1	0	96.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	21	0	0	100
FR3-IMGT	130	243	114	114	0	0	100
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	247	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  S  F  S  S  G  G  Y  Y  W  N  W  I  R  Q  H  P  G  K  G 
                    Query_13930  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCTTCAGCAGTGGTGGTTACTACTGGAACTGGATCCGCCAGCACCCAGGGAAGGGC  90
V  98.8% (247/250)  IGHV4-31*03  49   ....................................A........................G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  H  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13930  91   CTGGAGTGGATTGGGCACATCTATTACAGTGGGAGCACCTACTACAACCCGTCCCTCAAGAGTCGAGTTACCATATCAGTAGACACGTCT  180
V  98.8% (247/250)  IGHV4-31*03  139  ...............T..........................................................................  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G  H  Y  Y  Y  G  S 
                    Query_13930  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGACTGCCGCGGACACGGCCGTGTATTACTGTGCGAGAGGCCACTATTATTATGGTTCG  270
V  98.8% (247/250)  IGHV4-31*03  229  ......................................................................--------------------  298
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  95.8% (23/24)    IGHD3-10*01  2    ---------------------------------------------------------------------------.....C.........  16

                                      ----------------->                                  
                                       G  S  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13930  271  GGGAGTTATTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  322
D  95.8% (23/24)    IGHD3-10*01  17   .........-------------------------------------------  25
J  100.0% (43/43)   IGHJ4*02     6    ---------...........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33789120


Query= Query_122753

Length=335
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*08                                                                                           364     5e-103
IGHD7-27*01                                                                                           14.1    8.2   
IGHJ5*02                                                                                              98.7    6e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*08	IGHD7-27*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	AGTATCGACT	CTGGGGA	N/A	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAAGTATCGACTCTGGGGAACAACTGGTTCGACCCC	ARQVSTLGNNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	20	1	0	95.2
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	239	6	0	97.6


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  R  D  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13931  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCAGTCGTGACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  97.6% (239/245)  IGHV4-59*08  49   ..........................................A..T............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  N  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_13931  91   TGGATTGGGTATATCTATTACAGTGGGAACACCTACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAGGTCCAAGAAC  180
V  97.6% (239/245)  IGHV4-59*08  139  ............................G....A.............................................C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  Q  V  S  T  L  G  N  N  W 
                    Query_13931  181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGCCGTGTATTACTGTGCGAGACAAGTATCGACTCTGGGGAACAACTGG  270
V  97.6% (239/245)  IGHV4-59*08  229  ...............C.................................................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD7-27*01  5    ---------------------------------------------------------------------------.......--------  11
J  100.0% (51/51)   IGHJ5*02     1    ----------------------------------------------------------------------------------........  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13931  271  TTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  313
J  100.0% (51/51)   IGHJ5*02     9    ...........................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32522028


Query= Query_122757

Length=349
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           333     1e-93
IGHD3-10*01                                                                                           31.5    5e-05
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	TCGGACGAATA	ACTATGGTTCGGGGAG	CCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	TCGAGACATCGGACGAATAACTATGGTTCGGGGAGCCCCTTTGACTAC	SRHRTNNYGSGSPFDY	244	291	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	27	3	0	90
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	17	4	0	81
FR3-IMGT	130	243	114	105	9	0	92.1
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	232	19	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  I  S  S  S  T  Y  Y  W  A  W  I  R  Q  P  P  G  K  G 
                    Query_13932  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCATCAGCAGTAGCACTTACTACTGGGCCTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  92.4% (232/251)  IGHV4-39*01  49   ...............................G...............T.G...........G...........................G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  S  I  Y  P  G  G  R  T  Q  Y  I  P  S  L  R  S  R  L  T  M  S  V  D  S  S 
                    Query_13932  91   CTGGAGTGGATTGGGAGTATCTATCCTGGTGGGAGGACCCAGTACATCCCGTCCCTCAGGAGTCGACTCACCATGTCCGTAGACTCGTCC  180
V  92.4% (232/251)  IGHV4-39*01  139  ........................TA.A.......C...T.C....A...........A.......G.......A.........A.....  228
                                       L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------CDR3-IM
                                       K  N  Q  F  S  L  R  L  S  S  V  T  A  T  D  T  A  V  Y  Y  C  S  R  H  R  T  N  N  Y  G 
                    Query_13932  181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACCGCCACAGACACGGCTGTGTATTACTGTTCGAGACATCGGACGAATAACTATGGT  270
V  92.4% (232/251)  IGHV4-39*01  229  ...................A...................G.......................G.......-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (16/16)   IGHD3-10*01  6    ----------------------------------------------------------------------------------........  13

                                      GT------------------>                                  
                                       S  G  S  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13932  271  TCGGGGAGCCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  325
D  100.0% (16/16)   IGHD3-10*01  14   ........-----------------------------------------------  21
J  100.0% (44/44)   IGHJ4*02     5    -----------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34000302


Query= Query_122758

Length=339
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-4*01                                                                                            285     4e-79
IGHD3-10*01                                                                                           12.2    31   
IGHJ4*02                                                                                              60.3    2e-13


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGGGA	CATCTGGCGACACGTGGCAC	TCGGGG	T	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGACATCTGGCGACACGTGGCACTCGGGGTTTTGATTCC	AGHLATRGTRGFDS	241	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	54	27	22	5	0	81.5
FR2-IMGT	55	105	51	48	3	0	94.1
CDR2-IMGT	106	126	21	14	7	0	66.7
FR3-IMGT	127	240	114	99	15	0	86.8
CDR3-IMGT (germline)	241	246	6	5	1	0	83.3
Total	N/A	N/A	246	214	32	0	87


Alignments

                                      <--------FR1-IMGT---------><--------CDR1-IMGT--------><--------------------FR2-IMGT-------
                                       T  L  S  L  T  C  T  V  S  A  G  S  I  T  T  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 
                    Query_13933  1    ACCCTGTCCCTCACCTGCACTGTCTCTGCTGGCTCCATCACCACCAGTAATTGGTGGAGTTGGGTCCGCCAGCCCCCCGGGAAGGGGCTG  90
V  87.0% (214/246)  IGHV4-4*01   49   ..................G.........G...........G..GT.....C..........................A............  138
                                       T  L  S  L  T  C  A  V  S  G  G  S  I  S  S  S  N  W  W  S  W  V  R  Q  P  P  G  K  G  L 

                                      --------------><-----CDR2-IMGT-----><----------------------------------------------------F
                                       E  W  I  G  E  I  Y  H  G  G  A  F  N  Y  A  P  A  L  E  S  R  V  T  I  S  V  D  K  S  K 
                    Query_13933  91   GAATGGATTGGGGAGATCTATCATGGCGGAGCCTTCAACTACGCGCCGGCCCTCGAGAGTCGAGTCACCATCTCAGTAGACAAGTCCAAG  180
V  87.0% (214/246)  IGHV4-4*01   139  ..G...........A.........A.T..GAG.AC.......AAC...T.....A................A..................  228
                                       E  W  I  G  E  I  Y  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  K  S  K 

                                      R3-IMGT----------------------------------------------------><----------------CDR3-IMGT----
                                       N  Q  F  S  L  T  L  T  S  L  T  A  A  D  T  A  V  Y  F  C  A  G  H  L  A  T  R  G  T  R 
                    Query_13933  181  AATCAATTCTCCCTGACGCTGACGTCTCTGACCGCCGCGGACACGGCCGTATATTTCTGCGCGGGACATCTGGCGACACGTGGCACTCGG  270
V  87.0% (214/246)  IGHV4-4*01   229  ..C..G..........A.....GC...G......................G....G...T...A..------------------------  294
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R                         
D  100.0% (6/6)     IGHD3-10*01  14   --------------------------------------------------------------------------------------....  17

                                      ----------->                                  
                                       G  F  D  S  W  G  Q  G  V  L  V  T  V  S  S  
                    Query_13933  271  GGTTTTGATTCCTGGGGCCAGGGAGTCCTGGTCACCGTCTCCTCAG  316
D  100.0% (6/6)     IGHD3-10*01  18   ..--------------------------------------------  19
J  90.7% (39/43)    IGHJ4*02     6    ---.....C.A.............AC....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32944392


Query= Query_122759

Length=344
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           327     9e-92
IGHD1-26*01                                                                                           18.0    0.58 
IGHJ5*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TAGGACTG	TAGTGGGAG	GTTACA	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATAGGACTGTAGTGGGAGGTTACAACAACTGGTTCGACCCC	ARDRTVVGGYNNWFDP	238	285	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	22	2	0	91.7
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	108	6	0	94.7
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	227	18	0	92.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  S  V  S  G  D  S  I  S  R  Y  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13934  1    ACCCTGTCCCTCACCTGCTCTGTCTCTGGTGACTCCATCAGTCGTTACTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTAGAA  90
V  92.7% (227/245)  IGHV4-59*01  49   ..................A............G..........A..........................C................G..G  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  S  Y  N  G  G  S  P  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  R  S  K  N 
                    Query_13934  91   TGGATTGGATATAGCTATAACGGCGGGAGCCCCAACTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTGGACAGGTCCAAGAAC  180
V  92.7% (227/245)  IGHV4-59*01  139  ........G....T....T..A.T......A...........................................A....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------------CDR3-IMGT----
                                       Q  V  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  D  R  T  V  V  G  G  Y  N 
                    Query_13934  181  CAGGTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCGAGAGATAGGACTGTAGTGGGAGGTTACAAC  270
V  92.7% (227/245)  IGHV4-59*01  229  ...T...........C...G...........................G.................-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (9/9)     IGHD1-26*01  5    -------------------------------------------------------------------------.........--------  13
J  94.1% (48/51)    IGHJ5*02     1    ----------------------------------------------------------------------------------------..  2

                                      -------------->                                  
                                       N  W  F  D  P  W  G  Q  G  M  L  V  T  V  S  S  
                    Query_13934  271  AACTGGTTCGACCCCTGGGGCCAGGGAATGTTGGTCACCGTCTCCTCAG  319
J  94.1% (48/51)    IGHJ5*02     3    ............................CCC..................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33472347


Query= Query_122711

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-49*04                                                                                           367     6e-104
IGHD6-6*01                                                                                            19.9    0.17  
IGHJ6*02                                                                                              87.2    2e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-49*04	IGHD6-6*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
ACTAG	GAACCTGGTCTTC	GAGTATAGAGGCTCGT	GGGACCAGATAAAA	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGGAACCTGGTCTTCGAGTATAGAGGCTCGTGGGACCAGATAAAATACGGAATGGACGTC	TRNLVFEYRGSWDQIKYGMDV	249	311	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	27	3	0	90
FR3-IMGT	135	248	114	111	3	0	97.4
CDR3-IMGT (germline)	249	253	5	5	0	0	100
Total	N/A	N/A	253	244	9	0	96.4


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  D  D  Y  T  M  S  W  V  R  Q  A  P  G  K  G  L  
                    Query_13935  1    GGTCCCTGAGACTCTCCTGTACAGCTTCTGGATTCACCTTTGATGATTATACTATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  96.4% (244/253)  IGHV3-49*04  47   ..........................................G.......G.......................................  136
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  G  D  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  L  I  E  S  K  A  Y  G  G  T  T  K  Y  A  A  S  V  K  A  R  F  T  I  S  R  D  
                    Query_13935  91   AGTGGGTAGGTCTCATTGAAAGCAAAGCTTATGGTGGGACCACAAAATACGCCGCGTCTGTGAAAGCCAGATTCACCATCTCAAGAGATG  180
V  96.4% (244/253)  IGHV3-49*04  137  ...........T.....AG.....................A...G.....................G.......................  226
                                      E  W  V  G  F  I  R  S  K  A  Y  G  G  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      D  S  R  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T  R  N  L  V  F  E  
                    Query_13935  181  ATTCCAGAAGCATCGCCTATCTGCAAATGAACAGCCTGAAAACCGAGGACACAGCCGTGTATTACTGTACTAGGAACCTGGTCTTCGAGT  270
V  96.4% (244/253)  IGHV3-49*04  227  ......A..................................................................-----------------  299
                                      D  S  K  S  I  A  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  87.5% (14/16)    IGHD6-6*01   1    --------------------------------------------------------------------------------------....  4

                                      -----CDR3-IMGT-------------------------->                                 
                                      Y  R  G  S  W  D  Q  I  K  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13935  271  ATAGAGGCTCGTGGGACCAGATAAAATACGGAATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  344
D  87.5% (14/16)    IGHD6-6*01   5    ....CA......--------------------------------------------------------------  16
J  97.9% (47/48)    IGHJ6*02     15   --------------------------.....T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_19717

Length=326
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           367     5e-104
IGHD3-3*01                                                                                            39.1    2e-07 
IGHJ4*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	T	TTACGATTTTTTGAGTGGTTATT	N/A	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGATTTACGATTTTTTGAGTGGTTATTACTTC	AIYDFLSGYYF	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	24	0	0	100
FR2-IMGT	52	102	51	51	0	0	100
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	241	4	4	0	0	100
Total	N/A	N/A	241	238	3	0	98.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13936  1    ACCCTGTCCCTCACCTGCGCTGTCTATGGTGGGTCCTTCAGTGGTTACTACTGGAGCTGGATCCGCCAGCCCCCAGGGAAGGGGCTGGAG  90
V  98.8% (238/241)  IGHV4-34*01  49   ..........................................................................................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13936  91   TGGATTGGGGAAATCAATCATAGTGGAAGCACCAACTACAACCCGTCCCTGAAGAGTCGAGTCACCATATCAGTAGACACGTCCAAGAAC  180
V  98.8% (238/241)  IGHV4-34*01  139  ..................................................C.......................................  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  S  S  L  T  A  A  D  T  A  V  Y  Y  C  A  I  Y  D  F  L  S  G  Y  Y  F 
                    Query_13936  181  CAGTTCTCCCTGAAACTGAGCTCTCTGACCGCCGCGGACACGGCTGTGTATTACTGTGCGATTTACGATTTTTTGAGTGGTTATTACTTC  270
V  98.8% (238/241)  IGHV4-34*01  229  ..............G.........G....................................-----------------------------  289
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  95.7% (22/23)    IGHD3-3*01   4    --------------------------------------------------------------...........G...........-----  26
J  97.4% (38/39)    IGHJ4*02     10   -------------------------------------------------------------------------------------...A.  14

                                                                        
                                       W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13936  271  TGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  304
J  97.4% (38/39)    IGHJ4*02     15   ..................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31571709


Query= Query_185058

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-15*05                                                                                           329     3e-92
IGHD3-22*01                                                                                           14.1    8.7  
IGHJ4*02                                                                                              77.6    2e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-15*05	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGTAC	GTCGCG	CTATGAT	GCCGATATAAAAGGACAGGTCACAAAAAGA	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACGTCGCGCTATGATGCCGATATAAAAGGACAGGTCACAAAAAGAGACTAC	TSRYDADIKGQVTKRDY	249	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	134	30	28	2	0	93.3
FR3-IMGT	135	248	114	104	10	0	91.2
CDR3-IMGT (germline)	249	250	2	2	0	0	100
Total	N/A	N/A	250	230	20	0	92


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  R  A  W  M  T  W  V  R  Q  A  P  G  K  G  L  
                    Query_13937  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCAGGATTCACTTTCAATAGGGCCTGGATGACCTGGGTCCGCCAGGCGCCAGGGAAGGGTCTGG  90
V  92.0% (230/250)  IGHV3-15*05  47   .......T....................T.............G..AC..........G...............T...........G....  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  N  A  W  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  I  K  T  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  
                    Query_13937  91   AGTGGGTTGGCCGTATTAAAACCAAAACTGACGGTGGGACAACAGACTACGCTGCACCCGTGAAAGGCAGATTCACCATCTCAAGAGATG  180
V  92.0% (230/250)  IGHV3-15*05  137  .....................G.........T..........................................................  226
                                      E  W  V  G  R  I  K  S  K  T  D  G  G  T  T  D  Y  A  A  P  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><--------------------C
                                      D  S  K  Y  T  L  Y  L  Q  M  N  G  L  K  T  D  D  T  A  V  Y  Y  C  T  S  R  Y  D  A  D  
                    Query_13937  181  ACTCAAAGTACACCTTATATCTCCAAATGAATGGTCTGAAAACCGACGACACAGCCGTGTATTACTGTACGTCGCGCTATGATGCCGATA  270
V  92.0% (230/250)  IGHV3-15*05  227  .T.....AA....GC.G.....G........CA.............G.......................--------------------  296
                                      D  S  K  N  T  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  T                    
D  100.0% (7/7)     IGHD3-22*01  7    ----------------------------------------------------------------------------.......-------  13

                                      DR3-IMGT-------------------->                                  
                                      I  K  G  Q  V  T  K  R  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13937  271  TAAAAGGACAGGTCACAAAAAGAGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  333
J  100.0% (40/40)   IGHJ4*02     9    -----------------------........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_185054

Length=431
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           417     7e-119
IGHD3-9*01                                                                                            12.2    40    
IGHJ6*02                                                                                              108     1e-27 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	ACGGGCCCCA	ATTTCGATA	GCCCTTCGGAACGCTGGGGCCGACGAAAGAAAATATC	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACAACGGGCCCCAATTTCGATAGCCCTTCGGAACGCTGGGGCCGACGAAAGAAAATATCACTACTACTACAACGGTATGGACGTC	ARQRAPISIALRNAGADERKYHYYYNGMDV	284	373	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	113	1	0	99.1
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	291	279	12	0	95.9


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  E  P  G  E  S  L  K  I  S  C  K  G  S  G  S  G  F  N  T  Y
                    Query_13938  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAGAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATCCGGCTTTAACACGTA  90
V  95.9% (279/291)  IGHV5-51*01  6    ...............................A..........................................A.A......C..GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  D  W  M  G  I  I  Y  V  D  D  S  D  T  T  Y  S  P
                    Query_13938  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGACTGGATGGGGATCATCTATGTTGATGACTCTGATACCACATACAGCCC  180
V  95.9% (279/291)  IGHV5-51*01  96   ........G.................................G..................CC..G..............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13938  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  95.9% (279/291)  IGHV5-51*01  186  ..........................................................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><----------------------------------------CDR3-IMGT---------------------------
                                        M  Y  Y  C  A  R  Q  R  A  P  I  S  I  A  L  R  N  A  G  A  D  E  R  K  Y  H  Y  Y  Y  N
                    Query_13938  271  CATGTATTACTGTGCGAGACAACGGGCCCCAATTTCGATAGCCCTTCGGAACGCTGGGGCCGACGAAAGAAAATATCACTACTACTACAA  360
V  95.9% (279/291)  IGHV5-51*01  276  .....................---------------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                                        
D  88.9% (8/9)      IGHD3-9*01   3    -------------------------------...A.....--------------------------------------------------  11
J  98.3% (58/59)    IGHJ6*02     4    -----------------------------------------------------------------------------...........T.  16

                                      ------------>                                 
                                        G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13938  361  CGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  406
J  98.3% (58/59)    IGHJ6*02     17   ..............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 42392376


Query= Query_185057

Length=358
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-9*01                                                                                            329     3e-92
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ3*02                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-9*01	IGHD3-10*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGATA	GTCAGCGTACTGG	TATTGTTCGGG	CCGCCCCCTACGCTGGTCC	TGAGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAAGATAGTCAGCGTACTGGTATTGTTCGGGCCGCCCCCTACGCTGGTCCTGAGATT	AKDSQRTGIVRAAPYAGPEI	243	302	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	27	2	0	93.1
CDR1-IMGT	30	53	24	19	5	0	79.2
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	252	10	9	1	0	90
Total	N/A	N/A	252	231	21	0	91.7


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  E  G  S  G  F  T  F  K  L  Y  A  M  H  W  V  R  L  A  P  G  K  G  L  
                    Query_13939  1    GGTCCCTGAGACTCTCCTGTGAAGGCTCTGGATTCACCTTTAAACTGTATGCCATGCACTGGGTCCGGCTAGCTCCAGGGAAGGGCCTGG  90
V  91.7% (231/252)  IGHV3-9*01   47   .....................C..C................G.TGAT......................A....................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  D  D  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  W  N  S  A  S  M  G  Y  A  D  S  V  K  G  R  F  T  V  S  R  D  N  A  
                    Query_13939  91   AGTGGGTCTCAAGTATTAGTTGGAATAGTGCTAGCATGGGCTATGCGGACTCTGTGAAGGGCCGATTCACCGTTTCCAGAGACAACGCCA  180
V  91.7% (231/252)  IGHV3-9*01   137  ...........G..................G......A.................................A.C................  226
                                      E  W  V  S  G  I  S  W  N  S  G  S  I  G  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><-------------------------CD
                                      K  N  S  V  Y  L  Q  M  N  S  L  R  V  E  D  T  A  F  Y  Y  C  A  K  D  S  Q  R  T  G  I  
                    Query_13939  181  AGAACTCCGTGTATTTACAAATGAACAGTCTCAGAGTTGAGGACACGGCCTTCTACTACTGTGCGAAAGATAGTCAGCGTACTGGTATTG  270
V  91.7% (231/252)  IGHV3-9*01   227  ........C.....C.G..............G....C...............G..T........A.......------------------  298
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  L  Y  Y  C  A  K  D                    
D  90.9% (10/11)    IGHD3-10*01  8    -------------------------------------------------------------------------------------...G.  12

                                      R3-IMGT------------------------>                                  
                                      V  R  A  A  P  Y  A  G  P  E  I  W  G  Q  G  T  M  V  S  V  T  S  
                    Query_13939  271  TTCGGGCCGCCCCCTACGCTGGTCCTGAGATTTGGGGCCAAGGGACAATGGTCAGCGTCACTTCAG  336
D  90.9% (10/11)    IGHD3-10*01  13   ......------------------------------------------------------------  18
J  90.2% (37/41)    IGHJ3*02     10   -------------------------...T..C......................C....T......  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34950621


Query= Query_185050

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           339     2e-95
IGHD2-2*01                                                                                            31.5    5e-05
IGHJ4*02                                                                                              85.3    7e-21


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAA	GCGGAAT	TATTGTAGTAGTTCCACCTGCT	G	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGCGGAATTATTGTAGTAGTTCCACCTGCTGCTTTGACTAC	AKRNYCSSSTCCFDY	238	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	14	24	11	11	0	0	100
CDR1-IMGT	25	48	24	24	0	0	100
FR2-IMGT	49	99	51	49	2	0	96.1
CDR2-IMGT	100	123	24	22	2	0	91.7
FR3-IMGT	124	237	114	112	2	0	98.2
CDR3-IMGT (germline)	238	242	5	5	0	0	100
Total	N/A	N/A	229	223	6	0	97.4


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  L  I  
                    Query_13940  14   GTGCAGCCTCTGGATTCACCTTTAGCAGCTATGCCATGAGCTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGGAGTGGGTCTCACTTATTA  103
V  97.4% (223/229)  IGHV3-23*01  65   ...................................................................................GC.....  154
                                         A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  E  W  V  S  A  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  G  S  G  D  N  T  Y  F  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  
                    Query_13940  104  GTGGTAGTGGTGATAACACATACTTCGCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCAAGAATACGCTGTATCTGC  193
V  97.4% (223/229)  IGHV3-23*01  155  ............G..G........A...................................................C.............  244
                                      S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  R  N  Y  C  S  S  S  T  C  C  F  D  Y  
                    Query_13940  194  AAATGAACAGCCTGAGAGCCGAGGACACGGCCGTATATTACTGTGCGAAGCGGAATTATTGTAGTAGTTCCACCTGCTGCTTTGACTACT  283
V  97.4% (223/229)  IGHV3-23*01  245  .................................................-----------------------------------------  293
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                                            
D  90.9% (20/22)    IGHD2-2*01   5    --------------------------------------------------------............A...G.....------------  26
J  100.0% (44/44)   IGHJ4*02     5    -------------------------------------------------------------------------------...........  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13940  284  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  316
J  100.0% (44/44)   IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_204058

Length=329
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           308     4e-86
IGHJ6*02                                                                                              83.4    3e-20


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTATTACGGTATGGACGTC	AREAYSYYGMDV	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	48	3	0	94.1
CDR2-IMGT	103	123	21	17	4	0	81
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	221	24	0	90.2


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  A  N  H  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13941  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCGCTAATCACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  90.2% (221/245)  IGHV4-59*01  49   .......................................AG..G.T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  A  Y  I  S  H  R  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  T  A  D  R  S  K  N 
                    Query_13941  91   TGGATTGCCTATATCTCTCACAGGGGGGGCACCAATTACAACCGCTCCCTCAAGAGTCGAGTCACCATAACAGCGGACAGGTCCAAGAAC  180
V  90.2% (221/245)  IGHV4-59*01  139  .......GG.......A.T....T...A.......C.......C.........................T...TA....C..........  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  V  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D 
                    Query_13941  181  CAGTTTTCCCTGAAGGTGAGATCTGTGACCGCCGCGGACACGGCCGTATATTATTGTGCCAGAGAGGCCTACTCTTATTACGGTATGGAC  270
V  90.2% (221/245)  IGHV4-59*01  229  .....C.........C....C...........T..............G.....C.....G.....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
J  91.4% (53/58)    IGHJ6*02     5    --------------------------------------------------------------------.....AC..C............  26

                                      -->                                 
                                       V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_13941  271  GTCTGGGGCCAGGGGACCACGGTCATCGTCTCCTCA  306
J  91.4% (53/58)    IGHJ6*02     27   ...........A.............C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31888482


Query= Query_185052

Length=353
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         357     1e-100
IGHD3-10*01                                                                                           25.7    0.003 
IGHJ5*02                                                                                              98.7    7e-25 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ5*02	VH	Yes	In-frame	No	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAGAG	GCCTTCGGG	ACTATGTTTCGGGGAATTA	CT	ACAAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGGCCTTCGGGACTATGTTTCGGGGAATTACTACAACTGGTTCGACCCC	ARGLRDYVSGNYYNWFDP	244	297	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	50	1	0	98
CDR2-IMGT	109	129	21	20	1	0	95.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	250	7	7	0	0	100
Total	N/A	N/A	250	239	11	0	95.6


Alignments

                                        <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                         T  L  S  P  T  C  A  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 
                    Query_13942    1    ACCCTGTCCCCCACCTGCGCTGTCTCTGGTGGCTCCATCAGCAGTGGCGGTTACTACTGGAGTTGGATCCGCCAGCCCCCAGGGAAGGGC  90
V  95.6% (239/250)  IGHV4-30-4*01  49   ..........T.......A............................T.A........................................  138
                                         T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                        -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                         L  E  W  I  G  N  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  *  V  T  I  S  L  D  T  S 
                    Query_13942    91   CTGGAGTGGATTGGGAACATCTATTACAGTGGAAGCACCTACTACAACCCGTCCCTCAAGAGTTGAGTTACCATATCACTAGACACTTCC  180
V  95.6% (239/250)  IGHV4-30-4*01  139  ...............T................G..............................C..............G.......G...  228
                                         L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                        --FR3-IMGT----------------------------------------------------><----------------------CDR3
                                         K  N  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  C  C  A  R  G  L  R  D  Y  V  S 
                    Query_13942    181  AAGAACCAGTTCTCCCTGAGGCTGAGCTCTGTGACTGCCGCAGACACGGCCGTGTATTGCTGTGCCAGAGGCCTTCGGGACTATGTTTCG  270
V  95.6% (239/250)  IGHV4-30-4*01  229  ...................A......................................A...........--------------------  298
                                         K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  89.5% (17/19)    IGHD3-10*01    6    -------------------------------------------------------------------------------......G....  16

                                        -IMGT--------------------->                                  
                                         G  N  Y  Y  N  W  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13942    271  GGGAATTACTACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  331
D  89.5% (17/19)    IGHD3-10*01    17   ....G...-----------------------------------------------------  24
J  100.0% (51/51)   IGHJ5*02       1    ----------...................................................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34422666


Query= Query_185053

Length=379
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           434     4e-124
IGHD6-13*01                                                                                           12.2    35    
IGHJ3*02                                                                                              69.9    3e-16 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD6-13*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	TGGAAGCGGGCCGCACA	TGGTAC	GC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGTGGAAGCGGGCCGCACATGGTACGCCTTTTGATATC	AWKRAAHGTPFDI	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	23	1	0	95.8
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	286	3	3	0	0	100
Total	N/A	N/A	286	282	4	0	98.6


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  T  Y
                    Query_13943  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCCCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTACCACCTA  90
V  98.6% (282/286)  IGHV5-51*01  6    .............................................T........................................G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P
                    Query_13943  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCAGATACAGCCC  180
V  98.6% (282/286)  IGHV5-51*01  96   ..........................................................................................  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  N  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13943  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAACACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.6% (282/286)  IGHV5-51*01  186  ............................................G.............................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        I  Y  Y  C  A  W  K  R  A  A  H  G  T  P  F  D  I  W  G  Q  G  T  M  V  S  V  S  S  
                    Query_13943  271  CATTTATTACTGTGCGTGGAAGCGGGCCGCACATGGTACGCCTTTTGATATCTGGGGCCAGGGGACTATGGTCAGCGTCTCTTCAG  356
V  98.6% (282/286)  IGHV5-51*01  276  ...G............----------------------------------------------------------------------  291
                                        M  Y  Y  C  A                                                                       
D  100.0% (6/6)     IGHD6-13*01  16   ---------------------------------......-----------------------------------------------  21
J  93.3% (42/45)    IGHJ3*02     6    -----------------------------------------...................A.....A.......C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37168032


Query= Query_141252

Length=351
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           311     4e-87
IGHD5-12*01                                                                                           16.1    2.3  
IGHJ3*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD5-12*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TTTGGTCCCGAAAA	ATATAGTG	AATATC	CTTTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATTTGGTCCCGAAAAATATAGTGAATATCCTTTTGACATT	ARFGPEKYSEYPFDI	250	294	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	135	33	20	1	12	60.6
FR3-IMGT	136	249	114	106	8	0	93
CDR3-IMGT (germline)	250	255	6	6	0	0	100
Total	N/A	N/A	255	229	14	12	89.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  V  S  I  I  T  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13944  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGTCTCCATCATCACTTACTACTGGAGCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  89.8% (229/255)  IGHV4-59*01  49   ...............................G........GT.G..............................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----------CDR2-IMGT-----------><--------------------------------------------
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  F  N  T  N  Y  N  P  S  L  K  S  R  V  A  I  S  L  D 
                    Query_13944  91   TGGATTGGCTATATTTATTACAGTGGGAGCACCAACTTCAACACCAACTACAACCCCTCCCTCAAGAGTCGAGTCGCCATTTCACTAGAC  180
V  89.8% (229/255)  IGHV4-59*01  139  ........G.....C..............------------..................................A....A...G.....  216
                                       W  I  G  Y  I  Y  Y  S  G  S              T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D 

                                      --------FR3-IMGT----------------------------------------------------><-----------------CDR
                                       T  S  K  S  Q  F  S  L  R  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  F  G  P  E  K 
                    Query_13944  181  ACGTCCAAGAGCCAGTTCTCCCTGAGACTGAGTTCGGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGATTTGGTCCCGAAAAA  270
V  89.8% (229/255)  IGHV4-59*01  217  ..........A..............AG.....C..T.......................................---------------  291
                                       T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                
D  100.0% (8/8)     IGHD5-12*01  5    -----------------------------------------------------------------------------------------.  5

                                      3-IMGT----------------->                                  
                                       Y  S  E  Y  P  F  D  I  W  G  Q  G  T  M  V  T  V  S  A  
                    Query_13944  271  TATAGTGAATATCCTTTTGACATTTGGGGCCAAGGGACAATGGTCACCGTCTCTGCAG  328
D  100.0% (8/8)     IGHD5-12*01  6    .......---------------------------------------------------  12
J  93.3% (42/45)    IGHJ3*02     6    -------------.......T..C..............................T...  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34211484


Query= Query_141253

Length=340
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           343     2e-96
IGHD3-3*01                                                                                            16.1    2.2  
IGHJ3*02                                                                                              75.7    6e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ3*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TACCGCGAAAGTGG	GGAGTGGT	C	TTGAT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATACCGCGAAAGTGGGGAGTGGTCTTGATATC	ARDTAKVGSGLDI	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	26	4	0	86.7
FR2-IMGT	58	108	51	49	2	0	96.1
CDR2-IMGT	109	129	21	16	5	0	76.2
FR3-IMGT	130	243	114	109	5	0	95.6
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	235	16	0	93.6


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  G  A  V  S  S  S  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_13945  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCGCCGTCAGCAGCAGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGA  90
V  93.6% (235/251)  IGHV4-61*01  49   .................................T..........TG...G...........G............................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  Y  G  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  L  D  T  S 
                    Query_13945  91   CTGGAATGGATTGGGTATATCTACTACGGTGGAGACACCAAGTACAACCCCTCCCTCAAGAGTCGCGTCACCATATCATTAGACACGTCC  180
V  93.6% (235/251)  IGHV4-61*01  139  .....G.................T...A....GAG......C.......................A............G...........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  S  S  V  A  A  A  D  T  A  V  Y  Y  C  A  R  D  T  A  K  V  G  S 
                    Query_13945  181  AAGAACCAGTTCTCCCTGAAGCTGAGCTCTGTGGCCGCTGCGGACACGGCCGTCTATTACTGTGCGAGAGATACCGCGAAAGTGGGGAGT  270
V  93.6% (235/251)  IGHV4-61*01  229  .................................A...................G.................-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (8/8)     IGHD3-3*01   15   -------------------------------------------------------------------------------------.....  19

                                      ----------->                                  
                                       G  L  D  I  W  G  Q  G  T  M  V  I  V  S  S  
                    Query_13945  271  GGTCTTGATATCTGGGGCCAAGGGACAATGGTCATCGTCTCTTCAG  316
D  100.0% (8/8)     IGHD3-3*01   20   ...-------------------------------------------  22
J  97.6% (41/42)    IGHJ3*02     9    ----..............................C...........  50


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33049983


Query= Query_309348

Length=394
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           380     1e-107
IGHD3-22*01                                                                                           25.7    0.003 
IGHJ4*01                                                                                              79.5    4e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-22*01	IGHJ4*01	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCCAG	GGGGGC	TAGTAGTGTTTATTAC	AGAGATGG	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGGGGGGCTAGTAGTGTTTATTACAGAGATGGCTTTGACTAC	ARGASSVYYRDGFDY	292	336	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	10	78	69	66	3	0	95.7
CDR1-IMGT	79	102	24	19	5	0	79.2
FR2-IMGT	103	153	51	46	5	0	90.2
CDR2-IMGT	154	177	24	20	4	0	83.3
FR3-IMGT	178	291	114	110	4	0	96.5
CDR3-IMGT (germline)	292	296	5	4	1	0	80
Total	N/A	N/A	287	265	22	0	92.3


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  V  G  V  K  K  P  G  T  S  V  K  V  S  C  K  A  S  G  Y  T  F  D  A  Y 
                    Query_13946  10   CAGCTGGTGCAGTCTGGAGTTGGGGTGAAGAAGCCTGGGACCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGTTACACCTTTGATGCCTAT  99
V  92.3% (265/287)  IGHV1-18*01  7    ...................C..A................G.........................................ACCAG....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  N  W  V  R  Q  A  P  R  Q  G  L  E  W  V  G  W  I  N  T  Y  T  G  D  T  N  Y  A  Q 
                    Query_13946  100  GGTATCAACTGGGTGCGACAGGCCCCTCGACAAGGACTTGAGTGGGTGGGTTGGATCAACACTTACACTGGTGACACAAACTATGCACAG  189
V  92.3% (265/287)  IGHV1-18*01  97   .......G...................G.......G.........A....A.......G.G......A....A.................  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       N  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  R  L  R  Y  D  D  T  A 
                    Query_13946  190  AATCTCCAGGGCAGAGTCACCATGACCACTGACACATCCACGAGCACAGCCTACATGGAGCTGAGGAGACTGAGATATGACGACACGGCC  279
V  92.3% (265/287)  IGHV1-18*01  187  ..G..........................A......................................C.......C.............  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------CDR3-IMGT----------------->                                 
                                       V  Y  Y  C  A  R  G  A  S  S  V  Y  Y  R  D  G  F  D  Y  W  G  H  G  T  L  V  T  V  S  S 
                    Query_13946  280  GTGTATTACTGTGCCAGGGGGGCTAGTAGTGTTTATTACAGAGATGGCTTTGACTACTGGGGCCACGGAACCCTGGTCACCGTCTCCTCA  369
V  92.3% (265/287)  IGHV1-18*01  277  ..............G..-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  93.8% (15/16)    IGHD3-22*01  13   -----------------------........G.......---------------------------------------------------  28
J  97.7% (43/44)    IGHJ4*01     5    -----------------------------------------------..................A........................  47

                                       
                                       
                    Query_13946  370  G  370
J  97.7% (43/44)    IGHJ4*01     48   .  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38751897


Query= Query_141251

Length=338
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           305     3e-85
IGHD6-19*01                                                                                           12.2    31   
IGHJ5*02                                                                                              89.1    5e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGG	G	GGCTGG	CGAAGACAGCGG	AACTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGAGGGGGCTGGCGAAGACAGCGGAACTGGTTCGACCCC	ARGGWRRQRNWFDP	238	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	47	4	0	92.2
CDR2-IMGT	103	123	21	18	3	0	85.7
FR3-IMGT	124	237	114	102	12	0	89.5
CDR3-IMGT (germline)	238	245	8	7	1	0	87.5
Total	N/A	N/A	245	220	25	0	89.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  A  V  F  D  E  S  L  S  G  Y  Y  W  S  W  L  R  Q  P  P  G  K  G  L  E 
                    Query_13947  1    ACCCTGTCCCTCACCTGCGCTGTGTTTGATGAGTCCTTAAGTGGTTACTACTGGAGTTGGCTGCGCCAGCCCCCAGGGAAGGGACTGGAG  90
V  89.8% (220/245)  IGHV4-34*01  49   .......................C.A..G..G......C.................C...A.C....................G......  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  E  I  S  H  S  G  S  T  R  Y  N  P  A  L  R  S  R  V  T  M  S  V  D  T  S  K  K 
                    Query_13947  91   TGGATTGGGGAAATCAGTCATAGTGGAAGTACGAGGTACAACCCGGCCCTCAGGAGTCGAGTCACCATGTCAGTAGACACGTCCAAGAAG  180
V  89.8% (220/245)  IGHV4-34*01  139  ................A............C..C.AC.........T......A...............A....................C  228
                                       W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><----------------CDR3-IMGT-------
                                       Q  I  S  L  K  L  R  S  A  T  A  A  D  T  A  V  Y  Y  C  A  R  G  G  W  R  R  Q  R  N  W 
                    Query_13947  181  CAAATCTCCCTGAAGTTGCGCTCTGCGACCGCCGCGGACACGGCTGTATATTACTGTGCGCGAGGGGGCTGGCGAAGACAGCGGAACTGG  270
V  89.8% (220/245)  IGHV4-34*01  229  ..GT...........C..A......T.....................G............A....-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                         
D  100.0% (6/6)     IGHD6-19*01  13   ------------------------------------------------------------------......------------------  18
J  98.0% (48/49)    IGHJ5*02     3    ------------------------------------------------------------------------------------......  8

                                      -------->                                  
                                       F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13947  271  TTCGACCCCTGGGGCCAGGGAACGCTGGTCACCGTCTCCTCAG  313
J  98.0% (48/49)    IGHJ5*02     9    .......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32838801


Query= Query_141256

Length=365
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-72*01                                                                                           346     2e-97
IGHD2-8*01                                                                                            16.1    2.4  
IGHJ6*02                                                                                              94.9    1e-23


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-72*01	IGHD2-8*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TAGAG	GCTGTG	GTACTATTGGT	TATGAGGGTGGGGCCTG	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	ACTAGAGGCTGTGGTACTATTGGTTATGAGGGTGGGGCCTGCTACTACGGCATGGACGTC	TRGCGTIGYEGGACYYGMDV	249	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	134	30	25	5	0	83.3
FR3-IMGT	135	248	114	107	7	0	93.9
CDR3-IMGT (germline)	249	255	7	6	1	0	85.7
Total	N/A	N/A	255	238	17	0	93.3


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  T  D  Y  Y  M  D  W  V  R  Q  A  P  G  K  G  L  
                    Query_13948  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCACTGACTATTACATGGACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.3% (238/255)  IGHV3-72*01  47   ..........................................G....C.C........................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  H  Y  M  D  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><----------CDR2-IMGT---------><---------------------------------------------
                                      E  W  V  G  R  S  R  K  K  V  H  S  Y  S  T  E  Y  A  A  S  V  K  G  R  F  S  I  S  R  D  
                    Query_13948  91   AGTGGGTTGGTCGTAGTAGAAAAAAAGTTCACAGTTACTCCACAGAATACGCCGCGTCTGTGAAAGGCAGATTCAGCATCTCAAGGGATG  180
V  93.3% (238/255)  IGHV3-72*01  137  ..........C....C......C....C.A........A....................................C.........A....  226
                                      E  W  V  G  R  T  R  N  K  A  N  S  Y  T  T  E  Y  A  A  S  V  K  G  R  F  T  I  S  R  D  

                                      -------FR3-IMGT----------------------------------------------------><---------------------
                                      E  S  K  N  S  L  H  L  Q  M  N  S  L  K  A  E  D  T  A  V  Y  Y  C  T  R  G  C  G  T  I  
                    Query_13948  181  AGTCAAAAAACTCACTGCATCTGCAAATGAACAGCCTGAAAGCCGAGGACACGGCCGTCTATTACTGTACTAGAGGCTGTGGTACTATTG  270
V  93.3% (238/255)  IGHV3-72*01  227  .T.....G.........T.......................A................G.........G......---------------  301
                                      D  S  K  N  S  L  Y  L  Q  M  N  S  L  K  T  E  D  T  A  V  Y  Y  C  A  R                 
D  90.9% (10/11)    IGHD2-8*01   9    ---------------------------------------------------------------------------------......A..  17

                                      ----CDR3-IMGT------------------------>                                 
                                      G  Y  E  G  G  A  C  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13948  271  GTTATGAGGGTGGGGCCTGCTACTACGGCATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  341
D  90.9% (10/11)    IGHD2-8*01   18   ..---------------------------------------------------------------------  19
J  98.1% (51/52)    IGHJ6*02     11   -------------------.........T..........................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35689758


Query= Query_141257

Length=378
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-8*02                                                                                            394     7e-112
IGHD3-10*01                                                                                           21.8    0.045 
IGHJ4*02                                                                                              81.4    1e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-8*02	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGAC	TGGTTCGGGGA	CTT	ACTCC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTAC	ARVTGSGTYSFDY	284	322	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	68	2	0	97.1
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	102	12	0	89.5
CDR3-IMGT (germline)	284	290	7	7	0	0	100
Total	N/A	N/A	290	271	19	0	93.4


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  A  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  G  S  Y
                    Query_13949  1    GCAGCTGGTGCAGTCTGGAGCTGAGGCGAAGAAGCCTGGGGCCTCAGTGAAGGTCTCCTGCAAGGCTTCTGGATACACCTTCGGCAGCTA  90
V  93.4% (271/290)  IGHV1-8*02   6    ..................G.......T.......................................................AC......  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        D  I  N  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  D  Y  A  Q
                    Query_13949  91   TGATATCAACTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATGAATCCTAACAGTGGGAACACAGACTATGCACA  180
V  93.4% (271/290)  IGHV1-8*02   96   .........................A..................................C...........T.......G.........  185
                                        D  I  N  W  V  R  Q  A  T  G  Q  G  L  E  W  M  G  W  M  N  P  N  S  G  N  T  G  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  F  R  G  R  V  T  M  T  R  S  T  S  T  S  T  A  Y  M  E  L  S  S  L  G  S  A  D  T  A
                    Query_13949  181  GAAGTTCCGGGGCAGAGTCACCATGACCAGGAGCACGTCTACAAGCACAGCCTACATGGAGCTGAGTAGTCTGGGATCTGCCGACACGGC  270
V  93.4% (271/290)  IGHV1-8*02   186  ........A.......................A...C..C.T........................C..C...A......AG........  275
                                        K  F  Q  G  R  V  T  M  T  R  N  T  S  I  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><--------------CDR3-IMGT-------------->                                  
                                        V  Y  Y  C  A  R  V  T  G  S  G  T  Y  S  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13949  271  CGTCTATTACTGTGCGAGAGTGACTGGTTCGGGGACTTACTCCTTTGATTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  356
V  93.4% (271/290)  IGHV1-8*02   276  ...G................------------------------------------------------------------------  295
                                        V  Y  Y  C  A  R                                                                    
D  100.0% (11/11)   IGHD3-10*01  10   ------------------------...........---------------------------------------------------  20
J  95.8% (46/48)    IGHJ4*02     1    --------------------------------------...A......C.....................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37062441


Query= Query_141254

Length=355
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-21*01                                                                                           338     5e-95
IGHD3-22*01                                                                                           29.5    2e-04
IGHJ6*02                                                                                              91.1    1e-22


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-21*01	IGHD3-22*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	AAGTTTCTTG	GATAGTAGTGGTTAT	CCTCTGG	ACGGT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGAAAGTTTCTTGGATAGTAGTGGTTATCCTCTGGACGGTATGGACGTC	ARESFLDSSGYPLDGMDV	243	296	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	51	0	0	100
CDR2-IMGT	105	128	24	16	8	0	66.7
FR3-IMGT	129	242	114	107	7	0	93.9
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	233	17	0	93.2


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  D  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  
                    Query_13950  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTGACTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAAGGGGCTGG  90
V  93.2% (233/250)  IGHV3-21*01  47   ............................................AG............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  S  M  N  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  S  I  S  D  D  N  T  H  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  T  
                    Query_13950  91   AGTGGGTCTCATCCATTAGTGATGATAATACTCACATCTACTACGCTGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACACCA  180
V  93.2% (233/250)  IGHV3-21*01  137  ....................AG.AG..G..G.T....A........A.......................................G...  226
                                      E  W  V  S  S  I  S  S  S  S  S  Y  I  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  A  

                                      -FR3-IMGT----------------------------------------------------><----------------------CDR3-
                                      K  K  S  V  F  L  Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  A  R  E  S  F  L  D  S  S  
                    Query_13950  181  AGAAGTCAGTGTTTCTGCAAATGAACAGCCTGAGAGCCGACGACACGGCTGTCTATTACTGTGCGAGAGAAAGTTTCTTGGATAGTAGTG  270
V  93.2% (233/250)  IGHV3-21*01  227  ....C...C...A...........................G...........G.................--------------------  296
                                      K  N  S  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (15/15)   IGHD3-22*01  11   --------------------------------------------------------------------------------..........  20

                                      IMGT--------------------->                                 
                                      G  Y  P  L  D  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13950  271  GTTATCCTCTGGACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  329
D  100.0% (15/15)   IGHD3-22*01  21   .....------------------------------------------------------  25
J  100.0% (47/47)   IGHJ6*02     16   ------------...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34633848


Query= Query_141255

Length=356
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           322     2e-90
IGHD2-2*01                                                                                            25.7    0.003
IGHJ6*02                                                                                              106     3e-27


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD2-2*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCTCAG	AGTAGTACCAACTGTTATG	GGCTT	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCTCAGAGTAGTACCAACTGTTATGGGCTTCTACTACTACGGTATGGACGTC	ARGLRVVPTVMGFYYYGMDV	241	300	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	240	117	109	5	3	93.2
CDR3-IMGT (germline)	241	248	8	8	0	0	100
Total	N/A	N/A	248	229	16	3	92.3


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  Y  G  G  S  F  S  T  Y  Y  W  T  W  I  R  Q  T  P  G  K  G  L  E 
                    Query_13951  1    ACCCTGTCCCTCACCTGCACTGTCTATGGTGGGTCCTTCAGCACTTACTACTGGACCTGGATCCGCCAGACCCCAGGGAAGGGGCTGGAG  90
V  92.3% (229/248)  IGHV4-34*01  49   ..................G......................TGG...........G.............C....................  138
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><-----------------------------------------------------FR3
                                       W  I  G  E  I  Y  V  G  G  G  T  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 
                    Query_13951  91   TGGATTGGGGAAATCTATGTTGGTGGAGGCACCACCAACTACAACCCGTCCCTCAAGAGTCGAGTCACCATTTCAGTAGACACGTCCAAG  180
V  92.3% (229/248)  IGHV4-34*01  139  ...............A..CA.A.....A.....---...................................A..................  225
                                       W  I  G  E  I  N  H  S  G  S  T     N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K 

                                      -IMGT------------------------------------------------------><-------------------------CDR3
                                       N  Q  F  S  L  N  L  S  S  V  T  A  A  D  T  A  M  Y  Y  C  A  R  G  L  R  V  V  P  T  V 
                    Query_13951  181  AACCAGTTCTCCCTGAACCTGAGCTCTGTGACCGCCGCGGACACGGCTATGTACTACTGCGCGAGAGGCCTCAGAGTAGTACCAACTGTT  270
V  92.3% (229/248)  IGHV4-34*01  226  .................G..............................G....T.....T........----------------------  293
                                       N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                      
D  89.5% (17/19)    IGHD2-2*01   11   --------------------------------------------------------------------------..........G...C.  26

                                      -IMGT------------------------>                                 
                                       M  G  F  Y  Y  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13951  271  ATGGGCTTCTACTACTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  333
D  89.5% (17/19)    IGHD2-2*01   27   ...------------------------------------------------------------  29
J  100.0% (55/55)   IGHJ6*02     8    --------.......................................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34739439


Query= Query_14304

Length=342
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30*18                                                                                           316     2e-88
IGHD6-19*01                                                                                           29.5    2e-04
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30*18	IGHD6-19*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAAGA	TGGGGGA	AGCAGTGGCTGGTAC	TGGAGT	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTGAAAGATGGGGGAAGCAGTGGCTGGTACTGGAGTTTTGACTAT	VKDGGSSGWYWSFDY	240	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	16	26	11	11	0	0	100
CDR1-IMGT	27	50	24	21	3	0	87.5
FR2-IMGT	51	101	51	49	2	0	96.1
CDR2-IMGT	102	125	24	21	3	0	87.5
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	232	217	15	0	93.5


Alignments

                                      <FR1-IMGT-><-------CDR1-IMGT------><--------------------FR2-IMGT---------------------><---
                                         A  A  S  G  F  T  F  N  I  Y  G  I  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  F  V  
                    Query_13952  16   GTGCAGCCTCTGGATTCACCTTCAATATTTATGGCATCCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGCATTTGTTT  105
V  93.5% (217/232)  IGHV3-30*18  65   ........................G..GC........G.............................................G..A.A.  154
                                         A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  E  W  V  A  V  I  

                                      ----CDR2-IMGT------><----------------------------------------------------FR3-IMGT---------
                                      S  Y  D  G  G  N  K  Y  Y  T  D  S  V  R  G  R  F  S  I  S  R  D  N  S  K  N  T  L  F  M  
                    Query_13952  106  CATATGATGGAGGTAATAAATACTATACAGACTCCGTGAGGGGCCGATTCTCCATCTCCAGAGACAATTCCAAGAACACGCTGTTTATGC  195
V  93.5% (217/232)  IGHV3-30*18  155  ...........A..............G............A..........A.................................A.C...  244
                                      S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  K  N  T  L  Y  L  

                                      -------------------------------------------><-----------------CDR3-IMGT-----------------> 
                                      Q  M  N  S  L  R  A  D  D  T  A  V  Y  Y  C  V  K  D  G  G  S  S  G  W  Y  W  S  F  D  Y  
                    Query_13952  196  AAATGAACAGCCTGAGAGCTGACGACACGGCTGTGTATTACTGTGTGAAAGATGGGGGAAGCAGTGGCTGGTACTGGAGTTTTGACTATT  285
V  93.5% (217/232)  IGHV3-30*18  245  ......................G......................C......--------------------------------------  296
                                      Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                                         
D  100.0% (15/15)   IGHD6-19*01  7    -----------------------------------------------------------...............----------------  21
J  97.7% (42/43)    IGHJ4*02     6    --------------------------------------------------------------------------------........C.  15

                                                                       
                                      W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13952  286  GGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  318
J  97.7% (42/43)    IGHJ4*02     16   .................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33261165


Query= Query_14305

Length=370
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-39*01                                                                                           361     5e-102
IGHD3-10*01                                                                                           29.5    2e-04 
IGHJ4*02                                                                                              83.4    3e-20 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-39*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGCCTG	ATGGTTCGGGGAGCTATT	TGGAGGGGT	TACTT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGCCTGATGGTTCGGGGAGCTATTTGGAGGGGTTACTTTGACTAC	ARLMVRGAIWRGYFDY	267	314	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	48	2	0	96
CDR1-IMGT	51	80	30	26	4	0	86.7
FR2-IMGT	81	131	51	47	4	0	92.2
CDR2-IMGT	132	152	21	17	4	0	81
FR3-IMGT	153	266	114	109	5	0	95.6
CDR3-IMGT (germline)	267	269	3	3	0	0	100
Total	N/A	N/A	269	250	19	0	92.9


Alignments

                                      <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  S  V  S  G  G  S  F  S  S  S  N  F  Y  W  G  W  
                    Query_13953  1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGCAGTGTCTCTGGTGGCTCCTTCAGCAGTAGTAACTTCTACTGGGGCTGGA  90
V  92.9% (250/269)  IGHV4-39*01  26   ................T.........................C................A............GT.A..............  115
                                         G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  S  S  Y  Y  W  G  W  

                                      -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                      I  R  Q  A  P  G  K  G  L  E  W  I  G  N  I  W  Y  S  G  R  T  N  Y  N  T  S  L  K  S  R  
                    Query_13953  91   TCCGCCAGGCCCCAGGGAAGGGACTAGAGTGGATTGGGAATATCTGGTATAGTGGGAGGACTAACTACAACACGTCCCTCAAGAGTCGAG  180
V  92.9% (250/269)  IGHV4-39*01  116  ........C.............G..G.............G.....AT...........C..CT........C..................  205
                                      I  R  Q  P  P  G  K  G  L  E  W  I  G  S  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                      -------------------------FR3-IMGT----------------------------------------------------><---
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  G  V  Y  Y  C  A  
                    Query_13953  181  TCACCATATCCGTAGACACGTCCAAGAACCAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCCGCAGACACGGGTGTATATTACTGTGCGC  270
V  92.9% (250/269)  IGHV4-39*01  206  ............................................C...........................C...G............-  294
                                      V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                      ----------------CDR3-IMGT------------------>                                  
                                      R  L  M  V  R  G  A  I  W  R  G  Y  F  D  Y  W  G  Q  G  T  L  V  A  V  S  S  
                    Query_13953  271  GCCTGATGGTTCGGGGAGCTATTTGGAGGGGTTACTTTGACTACTGGGGCCAGGGAACCCTGGTCGCCGTCTCCTCAG  348
D  94.4% (17/18)    IGHD3-10*01  9    -----.............T....-------------------------------------------------------  26
J  97.8% (45/46)    IGHJ4*02     3    --------------------------------.................................A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36217713


Query= Query_141258

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           353     9e-100
IGHD6-19*01                                                                                           16.1    2.2   
IGHJ6*02                                                                                              94.9    9e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCGGGA	AGCAGTGG	N/A	CTATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCGGGAAGCAGTGGCTATTACCACGGTATGGACGTC	ARSGSSGYYHGMDV	243	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	22	2	0	91.7
FR3-IMGT	129	242	114	108	6	0	94.7
CDR3-IMGT (germline)	243	248	6	6	0	0	100
Total	N/A	N/A	248	237	11	0	95.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  R  N  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13954  1    GGTCCCTGAGACTCTCCTGTGCAGCGTCTGGATTCACCTTCAGGAACTATGGCATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGG  90
V  95.6% (237/248)  IGHV3-33*01  47   ...........................................T.G............................................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  T  N  E  H  Y  V  D  S  V  K  G  R  F  T  I  S  R  E  N  S  
                    Query_13954  91   AGTGGGTGGCCGTTATATGGTATGATGGAACTAATGAACATTATGTAGACTCCGTGAAGGGCCGATTCACCATCTCCAGAGAGAATTCCA  180
V  95.6% (237/248)  IGHV3-33*01  137  ..........A...................G....A..T.C....C....................................C.......  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><----------------CDR3-IMGT--
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  V  E  D  T  A  V  Y  Y  C  A  R  S  G  S  S  G  Y  Y  
                    Query_13954  181  AGAACACGCTGTATCTGCAAATGAACAGCCTGAGAGTCGAGGACACGGCTGTTTATTACTGTGCGAGATCGGGAAGCAGTGGCTATTACC  270
V  95.6% (237/248)  IGHV3-33*01  227  ....................................C...............G...............----------------------  294
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (8/8)     IGHD6-19*01  7    --------------------------------------------------------------------------........--------  14
J  96.4% (53/55)    IGHJ6*02     8    ----------------------------------------------------------------------------------...C...T  15

                                      ------------->                                 
                                      H  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S 
                    Query_13954  271  ACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCCTCA  317
J  96.4% (53/55)    IGHJ6*02     16   ...............................................  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_141259

Length=360
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-34*01                                                                                           296     2e-82
IGHD6-19*01                                                                                           18.0    0.61 
IGHJ6*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-34*01	IGHD6-19*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGG	CCACCGGGTG	AGCAATGGCTGG	GGAACTTACTATAAT	TACGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGGCCACCGGGTGAGCAATGGCTGGGGAACTTACTATAATTACGGGATGGACGCC	ARGHRVSNGWGTYYNYGMDA	244	303	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	25	2	0	92.6
CDR1-IMGT	28	57	30	23	1	6	76.7
FR2-IMGT	58	108	51	45	6	0	88.2
CDR2-IMGT	109	129	21	15	6	0	71.4
FR3-IMGT	130	243	114	106	8	0	93
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	222	23	6	88.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F  G  D  S  G  Y  Y  W  N  W  C  R  Q  P  P  G  K  G 
                    Query_13955  1    ACCCTGTCCCTCACCTGCGCTGTGTACGGTGGGTCCTTCGGTGACAGTGGTTATTACTGGAACTGGTGCCGCCAGCCACCAGGGAAGGGC  90
V  88.4% (222/251)  IGHV4-34*01  49   .......................C..T............------........C.......G....AT.........C...........G  132
                                       T  L  S  L  T  C  A  V  Y  G  G  S  F        S  G  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  E  I  I  P  Y  G  N  I  N  Y  N  Q  S  L  Q  S  R  V  T  I  S  V  D  T  S 
                    Query_13955  91   CTGGAATGGATTGGGGAAATCATTCCTTATGGAAACATCAACTACAATCAGTCCCTCCAGAGTCGAGTCACCATCTCAGTAGACACGTCC  180
V  88.4% (222/251)  IGHV4-34*01  133  .....G................A..A.AG.....G..C.........C.C.......A................A...............  222
                                       L  E  W  I  G  E  I  N  H  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------------------C
                                       K  N  Q  F  S  L  K  L  S  S  V  S  A  A  D  T  A  V  Y  Y  C  A  R  G  H  R  V  S  N  G 
                    Query_13955  181  AAGAACCAGTTCTCCCTGAAATTGAGCTCTGTGAGCGCCGCGGACACGGCTGTGTATTATTGTGCGAGAGGCCACCGGGTGAGCAATGGC  270
V  88.4% (222/251)  IGHV4-34*01  223  ....................GC............C........................C...........-------------------  293
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  G                   
D  91.7% (11/12)    IGHD6-19*01  7    ---------------------------------------------------------------------------------....G....  15

                                      DR3-IMGT------------------------>                                 
                                       W  G  T  Y  Y  N  Y  G  M  D  A  W  G  Q  G  T  A  V  S  V  S  S 
                    Query_13955  271  TGGGGAACTTACTATAATTACGGGATGGACGCCTGGGGCCAAGGGACCGCGGTCTCCGTCTCCTCA  336
D  91.7% (11/12)    IGHD6-19*01  16   ...---------------------------------------------------------------  18
J  91.7% (44/48)    IGHJ6*02     15   ------------------.....T.......T................A.....A...........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35161803


Query= Query_14300

Length=411
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*01                                                                                           397     8e-113
IGHD3-9*01                                                                                            41.1    8e-08 
IGHJ6*02                                                                                              79.5    5e-19 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*01	IGHD3-9*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	CGGGAACCCCGGAGACG	ATTACGATATTTTGACTGGTT	CCATTTTAG	ACTTC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGACGGGAACCCCGGAGACGATTACGATATTTTGACTGGTTCCATTTTAGACTTCGGTATGGACGTA	ARDGNPGDDYDILTGSILDFGMDV	284	355	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	68	1	0	98.6
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	49	2	0	96.1
CDR2-IMGT	146	169	24	23	1	0	95.8
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	8	0	0	100
Total	N/A	N/A	290	272	18	0	93.8


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  R  V  S  C  K  A  S  G  Y  T  F  R  N  Y 
                    Query_13956  2    CAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGGCCTCAGTGAGGGTCTCCTGCAAGGCTTCTGGCTACACCTTTAGGAACTAT  91
V  93.8% (272/290)  IGHV1-18*01  7    .................................................A.....................T..........CC.G....  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  G  Y  N  G  N  T  N  Y  A  E 
                    Query_13956  92   GGTATTAGTTGGGTGCGACAGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAGCGGTTACAATGGTAACACAAACTATGCAGAG  181
V  93.8% (272/290)  IGHV1-18*01  97   .....C..C....................................................C.........................C..  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       K  F  Q  G  R  V  T  M  S  T  D  T  S  T  S  T  S  Y  M  E  L  R  S  L  R  S  D  D  T  A 
                    Query_13956  182  AAGTTCCAAGGCAGGGTCACCATGAGCACTGACACATCCACGAGCACGTCCTACATGGAGCTGCGGAGCCTGAGATCTGACGACACGGCC  271
V  93.8% (272/290)  IGHV1-18*01  187  ...C....G.....A..........C...A.................AG..............A..........................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-------------------------------CDR3-IMGT------------------------------>      
                                       V  Y  F  C  A  R  D  G  N  P  G  D  D  Y  D  I  L  T  G  S  I  L  D  F  G  M  D  V  W  G 
                    Query_13956  272  GTGTATTTCTGTGCGAGAGACGGGAACCCCGGAGACGATTACGATATTTTGACTGGTTCCATTTTAGACTTCGGTATGGACGTATGGGGC  361
V  93.8% (272/290)  IGHV1-18*01  277  .......A............----------------------------------------------------------------------  296
                                       V  Y  Y  C  A  R                                                                         
D  100.0% (21/21)   IGHD3-9*01   3    -------------------------------------.....................--------------------------------  23
J  94.0% (47/50)    IGHJ6*02     13   -------------------------------------------------------------------...A............C......  35

                                                                 
                                       Q  G  T  T  V  I  V  S  S 
                    Query_13956  362  CAAGGGACCACGGTCATCGTCTCCTCA  388
J  94.0% (47/50)    IGHJ6*02     36   ................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 40288536


Query= Query_309347

Length=337
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-31*03                                                                                           305     3e-85
IGHD5-12*01                                                                                           16.1    2.2  
IGHJ4*02                                                                                              64.1    2e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-31*03	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TCGGGA	TGGCTACAATT	TTC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATCGGGATGGCTACAATTTTCTTGACTCC	ARDRDGYNFLDS	244	279	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	57	30	24	6	0	80
FR2-IMGT	58	108	51	43	8	0	84.3
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	7	1	0	87.5
Total	N/A	N/A	251	223	28	0	88.8


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  T  V  S  G  D  S  L  I  N  G  G  N  Y  W  S  W  I  R  Q  R  P  G  K  E 
                    Query_13957  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGACTCCCTCATCAATGGCGGTAACTACTGGAGTTGGATCCGCCAGCGCCCGGGGAAGGAG  90
V  88.8% (223/251)  IGHV4-31*03  49   ...............................G....A...G..G...T...T..........C.............A...A.......GC  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  G  Y  Y  W  S  W  I  R  Q  H  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  T  Y  Y  S  G  K  T  Q  Y  N  P  S  L  K  G  R  L  T  I  S  P  D  T  S 
                    Query_13957  91   TTGGAGTGGATTGGCTATACCTATTACAGTGGGAAGACCCAGTACAACCCGTCCCTCAAGGGTCGACTCACCATATCACCTGACACGTCT  180
V  88.8% (223/251)  IGHV4-31*03  139  C.............G..C.T..............GC...T.C..................A.....G.T.........GTA.........  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><-------------CDR3-IMGT----
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  D  R  D  G  Y  N  F 
                    Query_13957  181  AAGAACCAGTTCTCCCTGAAGCTGAGTTCTGTGACTGCCGCGGACACGGCCGTGTATTTCTGTGCGAGGGATCGGGATGGCTACAATTTT  270
V  88.8% (223/251)  IGHV4-31*03  229  ..........................C...............................A.........A..-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  90.9% (10/11)    IGHD5-12*01  11   -----------------------------------------------------------------------------.......G...--  21

                                      -------->                                  
                                       L  D  S  W  G  Q  G  I  L  V  T  V  S  S  
                    Query_13957  271  CTTGACTCCTGGGGCCAGGGGATCCTGGTCACCGTCTCCTCAG  313
J  92.9% (39/42)    IGHJ4*02     7    -......A............A.C....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32733210


Query= Query_309344

Length=341
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           333     1e-93
IGHD4-17*01                                                                                           19.9    0.15 
IGHJ5*02                                                                                              79.5    4e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD4-17*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TTC	CGGTGACTAC	AG	CAATT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATTCCGGTGACTACAGCAATTGGGTCGACCCC	ARDSGDYSNWVDP	244	282	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	57	30	28	2	0	93.3
FR2-IMGT	58	108	51	48	3	0	94.1
CDR2-IMGT	109	129	21	18	3	0	85.7
FR3-IMGT	130	243	114	104	10	0	91.2
CDR3-IMGT (germline)	244	251	8	8	0	0	100
Total	N/A	N/A	251	232	19	0	92.4


Alignments

                                      <--------FR1-IMGT---------><----------CDR1-IMGT---------><--------------------FR2-IMGT----
                                       T  L  S  L  T  C  S  V  S  G  D  S  V  S  S  G  S  Y  Y  W  T  W  I  R  Q  P  P  G  K  G 
                    Query_13958  1    ACCCTGTCCCTCACCTGCAGTGTCTCTGGTGACTCCGTCAGTAGTGGTAGTTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGG  90
V  92.4% (232/251)  IGHV4-61*01  49   ...................C...........G.........C...................G...........................A  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G 

                                      -----------------><-----CDR2-IMGT-----><--------------------------------------------------
                                       L  E  W  I  G  Y  I  Y  N  G  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 
                    Query_13958  91   CTGGAGTGGATTGGTTATATCTATAACGGAGGGAGCACCAATTATAATCCCTCCCTCAAAAGTCGAGTCACCATATCAGTAGACACATCC  180
V  92.4% (232/251)  IGHV4-61*01  139  ..............G.........T..A.T...........C..C..C...........G..........................G...  228
                                       L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S 

                                      --FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT---
                                       K  N  Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  I  Y  Y  C  A  R  D  S  G  D  Y  S  N 
                    Query_13958  181  AAGAACCAGTTCTCCCTGAAGTTGACCTCTGTGACCGCTGCGGACACGGCCATATATTATTGTGCGAGAGATTCCGGTGACTACAGCAAT  270
V  92.4% (232/251)  IGHV4-61*01  229  .....................C...G.........................G.G.....C...........-------------------  299
                                       K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                      
D  100.0% (10/10)   IGHD4-17*01  7    --------------------------------------------------------------------------..........------  16
J  94.0% (47/50)    IGHJ5*02     2    --------------------------------------------------------------------------------------...C  5

                                      ----------->                                  
                                       W  V  D  P  W  G  Q  G  T  L  V  T  V  S  A  
                    Query_13958  271  TGGGTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCGCAG  316
J  94.0% (47/50)    IGHJ5*02     6    ...T......................................T...  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33155574


Query= Query_309345

Length=327
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           355     3e-100
IGHD3-3*01                                                                                            10.3    115   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	CGCGGAAA	GATTT	C	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGACGCGGAAAGATTTCCTACTTTGACGGC	ARRGKISYFDG	238	270	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	20	4	0	83.3
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	21	0	0	100
FR3-IMGT	124	237	114	111	3	0	97.4
CDR3-IMGT (germline)	238	243	6	6	0	0	100
Total	N/A	N/A	243	235	8	0	96.7


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  H  G  S  I  S  G  F  Y  W  S  W  I  R  Q  S  P  G  K  G  L  E 
                    Query_13959  1    ACCCTGTCCCTCACCTGCACTGTCTCTCATGGCTCCATCAGTGGTTTCTACTGGAGCTGGATCCGGCAGTCCCCAGGGAAGGGACTGGAG  90
V  96.7% (235/243)  IGHV4-59*01  49   ...........................GG.............A...A......................C....................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  G  T  M  S  V  D  T  S  K  N 
                    Query_13959  91   TGGATTGGGTATATCTATTACAGTGGGAGCACCAACTACAACCCCTCCCTCAAGAGTCGAGGCACCATGTCAGTAGACACGTCCAAGAAC  180
V  96.7% (235/243)  IGHV4-59*01  139  .............................................................T......A.....................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-----------CDR3-IMGT----------->
                                       Q  F  S  L  K  L  T  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  R  G  K  I  S  Y  F  D  G 
                    Query_13959  181  CAGTTCTCCCTGAAGCTGACCTCTGTGACCGCTGCGGACACGGCCGTGTATTACTGTGCGAGACGCGGAAAGATTTCCTACTTTGACGGC  270
V  96.7% (235/243)  IGHV4-59*01  229  ...................G...........................................---------------------------  291
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (5/5)     IGHD3-3*01   8    -----------------------------------------------------------------------.....--------------  12
J  91.5% (43/47)    IGHJ4*02     2    -----------------------------------------------------------------------------..........TA.  14

                                                                        
                                       W  G  L  G  A  L  V  T  V  S  S  
                    Query_13959  271  TGGGGCCTGGGAGCCCTGGTCACCGTCTCCTCAG  304
J  91.5% (43/47)    IGHJ4*02     15   .......A....A.....................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31677300


Query= Query_13653

Length=393
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*01                                                                                           380     1e-107
IGHD2-2*01                                                                                            18.0    0.67  
IGHJ4*02                                                                                              58.4    1e-12 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*01	IGHD2-2*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	CGTCGGTG	CCAGCTGCT	CTTTTGCCCCACC	TTGAA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGCGTCGGTGCCAGCTGCTCTTTTGCCCCACCTTGAATAC	ARASVPAALLPHLEY	290	334	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	6	76	71	70	1	0	98.6
CDR1-IMGT	77	100	24	18	6	0	75
FR2-IMGT	101	151	51	49	2	0	96.1
CDR2-IMGT	152	175	24	22	2	0	91.7
FR3-IMGT	176	289	114	101	13	0	88.6
CDR3-IMGT (germline)	290	296	7	7	0	0	100
Total	N/A	N/A	291	267	24	0	91.8


Alignments

                                      <------------------------------FR1-IMGT-------------------------------><-------CDR1-IMGT--
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  D  T  F  R  N  
                    Query_13960  6    TGCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGCTTCTGGAGACACCTTCAGAAATT  95
V  91.8% (267/291)  IGHV1-69*01  5    ...................G.......................................................G.........C.GC.  94
                                         Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  

                                      ----><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><---------
                                      Y  G  I  T  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  T  N  Y  A  
                    Query_13960  96   ACGGTATCACCTGGGTGCGACAGGCCCCTGGACAAGGACTTGAGTGGATGGGAGGGATCATCCCTATCTTTGGAACAACAAACTACGCAC  185
V  91.8% (267/291)  IGHV1-69*01  95   .T.C.....G...........................G...................................T...G............  184
                                      Y  A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  

                                      -------------------------------------------FR3-IMGT---------------------------------------
                                      Q  K  F  R  D  R  V  T  I  T  T  D  E  F  T  S  T  A  Y  M  E  L  F  S  L  K  S  D  D  T  
                    Query_13960  186  AGAAGTTCCGGGACAGAGTCACCATTACTACGGACGAATTCACGAGCACAGCCTACATGGAGTTATTCAGTCTGAAATCTGACGACACGG  275
V  91.8% (267/291)  IGHV1-69*01  185  .........A..G.........G.....CG.........C......................C.GAG...C....G......G.......  274
                                      Q  K  F  Q  G  R  V  T  I  T  A  D  E  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  

                                      -------------><-----------------CDR3-IMGT----------------->                               
                                      A  V  Y  Y  C  A  R  A  S  V  P  A  A  L  L  P  H  L  E  Y  W  G  Q  G  T  L  V  V  V  S  
                    Query_13960  276  CCGTGTATTACTGTGCGAGAGCGTCGGTGCCAGCTGCTCTTTTGCCCCACCTTGAATACTGGGGTCAGGGAACCCTGGTCGTCGTCTCCT  365
V  91.8% (267/291)  IGHV1-69*01  275  .....................---------------------------------------------------------------------  295
                                      A  V  Y  Y  C  A  R                                                                       
D  100.0% (9/9)     IGHD2-2*01   18   -----------------------------.........----------------------------------------------------  26
J  90.5% (38/42)    IGHJ4*02     7    ---------------------------------------------------....C........C...............AC........  45

                                         
                                      S  
                    Query_13960  366  CAG  368
J  90.5% (38/42)    IGHJ4*02     46   ...  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 38646306


Query= Query_13652

Length=399
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-18*04                                                                                           343     2e-96
IGHD5-12*01                                                                                           12.2    37   
IGHJ4*02                                                                                              41.1    2e-07


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-18*04	IGHD5-12*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGCCGGATTTTCCTCTGATGGAC	GTGAATATA	TGACCCCGCT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGCCGGATTTTCCTCTGATGGACGTGAATATATGACCCCGCTCTTTGCCTTT	ARAGFSSDGREYMTPLFAF	284	340	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	2	70	69	63	6	0	91.3
CDR1-IMGT	71	94	24	20	4	0	83.3
FR2-IMGT	95	145	51	47	4	0	92.2
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	99	15	0	86.8
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	287	253	34	0	88.2


Alignments

                                      <-----------------------------FR1-IMGT------------------------------><-------CDR1-IMGT----
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  T  I  S  C  Q  A  S  G  Y  S  F  I  N  F 
                    Query_13961  2    CAGCTGGTGCAGTCTGGAGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGACGATCTCTTGCCAGGCTTCCGGTTACAGCTTTATCAACTTC  91
V  88.2% (253/287)  IGHV1-18*04  7    .......................G.........................A.G....C...A.......T.......C.....C..G..A.  96
                                       Q  L  V  Q  S  G  A  E  V  K  K  P  G  A  S  V  K  V  S  C  K  A  S  G  Y  T  F  T  S  Y 

                                      --><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><-----------
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  L  G  W  I  S  A  H  R  G  D  T  K  Y  A  Q 
                    Query_13961  92   GGTATCAGCTGGGTGCGACAGGCCCCTGGACAGGGGCTCGAATGGCTGGGATGGATCAGCGCGCACAGAGGTGACACAAAATATGCACAG  181
V  88.2% (253/287)  IGHV1-18*04  97   ................................A.....T..G...A................TT...AT...A.......C.........  186
                                       G  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  W  I  S  A  Y  N  G  N  T  N  Y  A  Q 

                                      -----------------------------------------FR3-IMGT-----------------------------------------
                                       S  F  Q  G  R  V  T  M  T  T  D  T  L  T  G  T  A  F  L  D  V  R  S  L  R  S  D  D  T  A 
                    Query_13961  182  AGTTTCCAGGGCAGAGTCACCATGACCACAGACACACTCACGGGAACAGCGTTCCTGGACGTGAGGAGCCTGCGATCTGACGACACGGCC  271
V  88.2% (253/287)  IGHV1-18*04  187  .AGC................................TC....A.C.....C.A.A....GC...........A.................  276
                                       K  L  Q  G  R  V  T  M  T  T  D  T  S  T  S  T  A  Y  M  E  L  R  S  L  R  S  D  D  T  A 

                                      -----------><-----------------------CDR3-IMGT----------------------->                     
                                       V  Y  Y  C  A  R  A  G  F  S  S  D  G  R  E  Y  M  T  P  L  F  A  F  W  G  R  G  T  P  V 
                    Query_13961  272  GTTTATTACTGTGCGAGGGCCGGATTTTCCTCTGATGGACGTGAATATATGACCCCGCTCTTTGCCTTTTGGGGCCGGGGAACCCCGGTC  361
V  88.2% (253/287)  IGHV1-18*04  277  ..G..............-------------------------------------------------------------------------  293
                                       V  Y  Y  C  A                                                                            
D  88.9% (8/9)      IGHD5-12*01  1    ----------------------------------------...G.....-----------------------------------------  9
J  84.6% (33/39)    IGHJ4*02     5    -----------------------------------------------------------.....A..AC.......A........T....  35

                                              
                                       S  V  S
                    Query_13961  362  TCCGTCTC  369
J  84.6% (33/39)    IGHJ4*02     36   A.......  43


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39026232


Query= Query_13650

Length=377
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           394     7e-112
IGHD1-1*01                                                                                            14.1    9.2   
IGHJ4*02                                                                                              85.3    8e-21 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD1-1*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GCGAG	GGGAGGGGG	CAACTGG	GACCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTAC	ARGGGNWDPFDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	46	5	0	90.2
CDR2-IMGT	146	169	24	21	3	0	87.5
FR3-IMGT	170	283	114	108	6	0	94.7
CDR3-IMGT (germline)	284	288	5	5	0	0	100
Total	N/A	N/A	288	270	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  A  S  G  Y  S  F  T  A  Y
                    Query_13962  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGCTTCTGGATACAGTTTTACCGCCTA  90
V  93.8% (270/288)  IGHV5-51*01  6    .................................................................G............C......AG...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  H  M  P  G  E  G  L  E  W  M  G  V  V  Y  P  D  D  S  D  A  R  Y  S  P
                    Query_13962  91   CTGGATCGGCTGGGTGCGGCACATGCCCGGGGAAGGCCTGGAATGGATGGGGGTCGTCTATCCTGATGACTCTGATGCCAGATACAGCCC  180
V  93.8% (270/288)  IGHV5-51*01  96   ..................C..G.........A..........G.........A..A.........G..........A.............  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  E  G  H  I  T  I  S  A  D  K  S  I  S  T  A  F  L  Q  W  N  S  L  K  A  S  D  T  A
                    Query_13962  181  GTCCTTCGAAGGCCACATCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTTCCTGCAGTGGAACAGCCTGAAGGCCTCGGACACCGC  270
V  93.8% (270/288)  IGHV5-51*01  186  .......C.......GG....................................A...........G........................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                  
                                        I  Y  Y  C  A  R  G  G  G  N  W  D  P  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13962  271  CATCTATTACTGTGCGAGGGGAGGGGGCAACTGGGACCCCTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  353
V  93.8% (270/288)  IGHV5-51*01  276  ...G..............-----------------------------------------------------------------  293
                                        M  Y  Y  C  A                                                                    
D  100.0% (7/7)     IGHD1-1*01   5    ---------------------------.......-------------------------------------------------  11
J  100.0% (44/44)   IGHJ4*02     5    ---------------------------------------............................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36956850


Query= Query_130055

Length=330
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           321     6e-90
IGHD3-10*01                                                                                           14.1    8.0  
IGHJ4*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCC	TTCGGGG	GGTGACAGG	TTTGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTCGGGGGGTGACAGGTTTGACTAC	ARDPSGGDRFDY	238	273	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	26	1	0	96.3
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	49	2	0	96.1
CDR2-IMGT	103	123	21	16	5	0	76.2
FR3-IMGT	124	237	114	105	9	0	92.1
CDR3-IMGT (germline)	238	245	8	8	0	0	100
Total	N/A	N/A	245	225	20	0	91.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  N  V  S  G  G  S  I  S  T  F  H  W  S  W  I  R  Q  P  P  G  R  G  L  E 
                    Query_13963  1    ACCCTGTCCCTCACCTGCAATGTCTCTGGTGGCTCCATCAGTACTTTCCACTGGAGCTGGATCCGGCAGCCCCCAGGGAGGGGACTGGAG  90
V  91.8% (225/245)  IGHV4-59*01  49   ...................C.......................G..A.T..............................A..........  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  S  V  S  F  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  S  I  S  V  D  T  S  K  N 
                    Query_13963  91   TGGATTGGGTCTGTCTCTTTTAGCGGGAGCACCAACTACAATCCCTCCCTCAAGAGTCGAGTTTCCATATCAGTAGACACGTCCAAGAAC  180
V  91.8% (225/245)  IGHV4-59*01  139  ..........A.A...A..AC..T.................C....................CA..........................  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><-------------CDR3-IMGT----------
                                       Q  F  S  L  K  L  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  D  P  S  G  G  D  R  F  D 
                    Query_13963  181  CAGTTCTCCCTGAAACTGAACTCCGTGACGGCTGCGGACACGGCCGTTTATTTCTGTGCGAGAGATCCTTCGGGGGGTGACAGGTTTGAC  270
V  91.8% (225/245)  IGHV4-59*01  229  ..............G....G...T.....C.................G....A............-------------------------  293
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                            
D  100.0% (7/7)     IGHD3-10*01  13   --------------------------------------------------------------------.......---------------  19
J  97.7% (42/43)    IGHJ4*02     6    ------------------------------------------------------------------------------------......  11

                                      -->                                  
                                       Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13963  271  TACTGGGGCCAGGGAACCCTGGTCACCGTCTCTTCAG  307
J  97.7% (42/43)    IGHJ4*02     12   ................................C....  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31994073


Query= Query_13656

Length=406
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV1-69*06                                                                                           364     6e-103
IGHD3-16*02                                                                                           10.3    143   
IGHJ6*02                                                                                              96.8    3e-24 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV1-69*06	IGHD3-16*02	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGGGA	TACAGGACAAGAAGTGCC	TCGTT	CCCGCCGGG	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGGGATACAGGACAAGAAGTGCCTCGTTCCCGCCGGGACTACTACTACCACGGTATGGACGTC	ARDTGQEVPRSRRDYYYHGMDV	284	349	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	67	3	0	95.7
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	44	7	0	86.3
CDR2-IMGT	146	169	24	19	5	0	79.2
FR3-IMGT	170	283	114	104	10	0	91.2
CDR3-IMGT (germline)	284	291	8	7	1	0	87.5
Total	N/A	N/A	291	262	29	0	90


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  V  S  G  G  A  F  T  S  F
                    Query_13964  1    GCAGCTGGTGCAGTCTGGAGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAAGGTCTCCTGCAAGGTCTCTGGAGGCGCCTTCACCAGCTT  90
V  90.0% (262/291)  IGHV1-69*06  6    ..................G..............................................CT.........A......G.....A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  S  S  V  K  V  S  C  K  A  S  G  G  T  F  S  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        A  L  N  W  V  R  L  A  P  G  Q  G  L  E  W  L  G  K  I  I  P  S  F  G  T  T  Y  Y  A  Q
                    Query_13964  91   TGCTCTCAACTGGGTGCGACTGGCCCCTGGACAAGGACTTGAGTGGTTGGGAAAGATCATCCCTTCTTTTGGTACGACATACTACGCACA  180
V  90.0% (262/291)  IGHV1-69*06  96   ....A...G...........A...............G.........A.....GG..........ATC........AG..A..........  185
                                        A  I  S  W  V  R  Q  A  P  G  Q  G  L  E  W  M  G  G  I  I  P  I  F  G  T  A  N  Y  A  Q

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        K  L  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  T  H  M  E  L  S  S  L  R  S  D  D  T  A
                    Query_13964  181  GAAGTTACAGGGCAGAGTCACTATTACCGCGGACAAATCCACGAGCACAACCCACATGGAGCTGAGTAGCCTGAGATCTGACGACACGGC  270
V  90.0% (262/291)  IGHV1-69*06  186  ......C..............G...........................G..T.............C..............G........  275
                                        K  F  Q  G  R  V  T  I  T  A  D  K  S  T  S  T  A  Y  M  E  L  S  S  L  R  S  E  D  T  A

                                      ------------><----------------------------CDR3-IMGT--------------------------->           
                                        G  Y  F  C  A  R  D  T  G  Q  E  V  P  R  S  R  R  D  Y  Y  Y  H  G  M  D  V  W  G  Q  G
                    Query_13964  271  CGGGTACTTCTGTGCGAGGGATACAGGACAAGAAGTGCCTCGTTCCCGCCGGGACTACTACTACCACGGTATGGACGTCTGGGGCCAAGG  360
V  90.0% (262/291)  IGHV1-69*06  276  ..T...T.A.........A..---------------------------------------------------------------------  296
                                        V  Y  Y  C  A  R                                                                        
D  100.0% (5/5)     IGHD3-16*02  28   ---------------------------------------.....----------------------------------------------  32
J  94.9% (56/59)    IGHJ6*02     4    -----------------------------------------------------...........T.........................  40

                                                            
                                        T  T  V  F  V  S  S 
                    Query_13964  361  GACCACGGTCTTCGTCTCCTCA  382
J  94.9% (56/59)    IGHJ6*02     41   ..........AC..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 39762576


Query= Query_13655

Length=367
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           305     3e-85
IGHD3-3*01                                                                                            31.5    6e-05
IGHJ4*02                                                                                              56.4    4e-12


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	CGGGCCACGGATCCGAT	TTACGATTTTTGGACTGGT	GATATCAAGGCCGCTTCCTTTGGCCT	CTGGG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGCGGGCCACGGATCCGATTTACGATTTTTGGACTGGTGATATCAAGGCCGCTTCCTTTGGCCTC	ARATDPIYDFWTGDIKAASFGL	243	308	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	17	7	0	70.8
FR2-IMGT	54	104	51	48	3	0	94.1
CDR2-IMGT	105	128	24	19	5	0	79.2
FR3-IMGT	129	242	114	105	9	0	92.1
CDR3-IMGT (germline)	243	245	3	3	0	0	100
Total	N/A	N/A	245	220	25	0	89.8


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  N  F  R  D  S  T  M  N  W  V  R  Q  A  P  G  T  G  L  
                    Query_13965  1    GGTCCCTGAGACTCTCCTGTGCTGCCTCTGGATTCAACTTTAGAGACTCTACTATGAACTGGGTCCGCCAGGCTCCAGGGACGGGGCTGG  90
V  89.8% (220/245)  IGHV3-23*01  47   ......................A.............C......CAG..A.G.C....G.......................A........  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  G  I  S  G  N  G  R  K  T  Y  S  A  V  S  V  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13965  91   AGTGGGTCTCAGGTATCAGTGGTAATGGTCGTAAAACATACTCCGCAGTCTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACAATTCCA  180
V  89.8% (220/245)  IGHV3-23*01  137  ............C...T.......G....G...GC.......A.....A.........................................  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><---------------------------
                                      K  N  T  L  S  L  Q  M  N  S  L  R  H  E  D  T  A  V  Y  F  C  A  R  A  T  D  P  I  Y  D  
                    Query_13965  181  AGAACACTCTGTCTCTTCAAATGAACAGCCTGAGACACGAGGACACGGCCGTTTATTTCTGTGCGCGGGCCACGGATCCGATTTACGATT  270
V  89.8% (220/245)  IGHV3-23*01  227  .......G....A...G..................GC...............A....A.......-------------------------  291
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A                          
D  94.7% (18/19)    IGHD3-3*01   4    ----------------------------------------------------------------------------------........  11

                                      -CDR3-IMGT--------------------------->                                  
                                      F  W  T  G  D  I  K  A  A  S  F  G  L  W  G  R  G  T  L  V  S  V  S  S  
                    Query_13965  271  TTTGGACTGGTGATATCAAGGCCGCTTCCTTTGGCCTCTGGGGCCGGGGAACCCTGGTCTCCGTCTCCTCAG  342
D  94.7% (18/19)    IGHD3-3*01   12   ......G....-------------------------------------------------------------  22
J  94.3% (33/35)    IGHJ4*02     14   -------------------------------------........A.............A............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35900940


Query= Query_247527

Length=345
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-23*01                                                                                           341     5e-96
IGHD3-22*01                                                                                           19.9    0.15 
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-23*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AAGGA	TAACACGTATTCC	AGTGGTTATT	CACCCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAGGATAACACGTATTCCAGTGGTTATTCACCCCTTGACTAC	AKDNTYSSGYSPLDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	21	3	0	87.5
FR2-IMGT	54	104	51	46	5	0	90.2
CDR2-IMGT	105	128	24	21	3	0	87.5
FR3-IMGT	129	242	114	110	4	0	96.5
CDR3-IMGT (germline)	243	250	8	7	1	0	87.5
Total	N/A	N/A	250	234	16	0	93.6


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  N  N  H  A  L  S  W  L  R  Q  A  P  G  K  G  P  
                    Query_13966  1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTTAACAACCATGCCCTGAGTTGGCTCCGCCAGGCTCCAGGGAAGGGGCCGG  90
V  93.6% (234/250)  IGHV3-23*01  47   ..........................................G..G.T.....A....C...G........................T..  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  S  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  S  A  I  T  G  S  G  S  S  T  Y  Y  S  D  S  V  K  G  R  F  T  I  S  R  D  Y  S  
                    Query_13966  91   AGTGGGTCTCAGCGATTACTGGGAGTGGTAGTAGCACATACTACTCAGACTCCGTGAAGGGCCGGTTCACCATCTCCAGAGACTATTCCA  180
V  93.6% (234/250)  IGHV3-23*01  137  .............T....G...T......G..............G......................................A......  226
                                      E  W  V  S  A  I  S  G  S  G  G  S  T  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K  D  N  T  Y  S  S  G  
                    Query_13966  181  AGAACACGCTGTATCTGCAAATGAACAGCCTTAGAGCCGAGGACACGGCCGTGTATTACTGTGCGAAGGATAACACGTATTCCAGTGGTT  270
V  93.6% (234/250)  IGHV3-23*01  227  ...............................G....................A..............A..--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  K                       
D  100.0% (10/10)   IGHD3-22*01  17   -----------------------------------------------------------------------------------.......  23

                                      ---------------->                                  
                                      Y  S  P  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13966  271  ATTCACCCCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAG  321
D  100.0% (10/10)   IGHD3-22*01  24   ...------------------------------------------------  26
J  100.0% (42/42)   IGHJ4*02     7    ---------..........................................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33577938


Query= Query_13659

Length=376
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           399     3e-113
IGHD2-15*01                                                                                           10.3    132   
IGHJ4*02                                                                                              68.0    1e-15 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD2-15*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGACA	CGAGAAG	GGTGG	CGGGGCGAAC	GACTA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GTCAGACACGAGAAGGGTGGCGGGGCGAACGACTAC	VRHEKGGGANDY	284	319	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	69	1	0	98.6
CDR1-IMGT	71	94	24	19	5	0	79.2
FR2-IMGT	95	145	51	50	1	0	98
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	107	7	0	93.9
CDR3-IMGT (germline)	284	291	8	6	2	0	75
Total	N/A	N/A	291	273	18	0	93.8


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  M  F  P  N  Y
                    Query_13967  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCGGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACATGTTTCCCAATTA  90
V  93.8% (273/291)  IGHV5-51*01  6    ....................................C........................................GC...A...GC..  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  N  I  Y  P  A  D  S  D  T  R  Y  S  L
                    Query_13967  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGAACATCTATCCTGCTGACTCTGACACCAGATACAGTCT  180
V  93.8% (273/291)  IGHV5-51*01  96   .....................................................T...........G.........T...........C.C  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        T  F  E  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13967  181  GACCTTCGAAGGCCAGGTCACCATCTCAGCCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGTCTGAAGGCCTCGGACACCGC  270
V  93.8% (273/291)  IGHV5-51*01  186  .T.....C.............................................................C....................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-------------CDR3-IMGT------------>                                
                                        V  Y  Y  C  V  R  H  E  K  G  G  G  A  N  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13967  271  CGTGTATTATTGTGTCAGACACGAGAAGGGTGGCGGGGCGAACGACTACTGGGGCCAGGGAACGCTGGTCACCGTCTCCTC  351
V  93.8% (273/291)  IGHV5-51*01  276  .A.......C....CG.....------------------------------------------------------------  296
                                        M  Y  Y  C  A  R                                                               
D  100.0% (5/5)     IGHD2-15*01  14   ----------------------------.....------------------------------------------------  18
J  97.4% (37/38)    IGHJ4*02     9    -------------------------------------------....................C.................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 36851259


Query= Query_13658

Length=331
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHJ6*02                                                                                              94.9    9e-24


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	N/A	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	N/A	N/A	GGC	CTACT	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAGAGAGGCCTACTCTTACTACGGTATGGACGTC	AREAYSYYGMDV	240	275	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	21	5	0	80.8
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	125	21	20	1	0	95.2
FR3-IMGT	126	239	114	108	6	0	94.7
CDR3-IMGT (germline)	240	247	8	7	1	0	87.5
Total	N/A	N/A	244	227	17	0	93


Alignments

                                      <--------FR1-IMGT--------><-------CDR1-IMGT------><--------------------FR2-IMGT-----------
                                         L  R  L  S  C  T  V  S  G  G  S  I  G  N  Y  Y  W  T  W  I  R  Q  P  P  G  K  G  L  E  
                    Query_13968  4    CCCTGAGACTCTCCTGTACTGTCTCTGGTGGCTCCATCGGTAATTACTACTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAGT  93
V  93.0% (227/244)  IGHV4-59*01  50   .....TCC...A....C.....................A...G...........G...................................  139
                                         L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E  

                                      ----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-I
                                      W  I  G  Y  I  Y  Y  S  G  G  T  N  Y  N  R  S  L  K  S  R  V  T  I  S  V  D  K  S  K  N  
                    Query_13968  94   GGATTGGCTATATCTATTACAGTGGGGGCACCAACTACAACCGCTCCCTCAAGAGTCGAGTCACCATATCAGTAGACAAGTCCAAGAACC  183
V  93.0% (227/244)  IGHV4-59*01  140  .......G..................A...............C...................................C...........  229
                                      W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N  

                                      MGT----------------------------------------------------><-------------CDR3-IMGT-----------
                                      Q  F  S  V  N  L  R  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R  E  A  Y  S  Y  Y  G  M  D  
                    Query_13968  184  AGTTCTCCGTGAACCTGAGATCTGTGACCGCTGCGGACACGGCCGTATATTACTGTGCCAGAGAGGCCTACTCTTACTACGGTATGGACG  273
V  93.0% (227/244)  IGHV4-59*01  230  ........C....G.....C..........................G...........G.....--------------------------  293
                                      Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                             
J  94.8% (55/58)    IGHJ6*02     5    -------------------------------------------------------------------.....AC................  27

                                      ->                                 
                                      V  W  G  Q  G  T  T  V  I  V  S  S 
                    Query_13968  274  TCTGGGGCCAAGGGACCACGGTCATCGTCTCCTCA  308
J  94.8% (55/58)    IGHJ6*02     28   ........................C..........  62


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 32099664


Query= Query_21714

Length=346
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-30-3*01                                                                                         335     4e-94
IGHD3-22*01                                                                                           14.1    8.5  
IGHJ4*02                                                                                              62.2    6e-14


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-30-3*01	IGHD3-22*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCTTGGGT	TAGGGGTTAT	AAGGGTTT	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCTTGGGTTAGGGGTTATAAGGGTTTCTTTGACTAC	ARDPWVRGYKGFFDY	243	287	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	29	0	0	100
CDR1-IMGT	30	53	24	23	1	0	95.8
FR2-IMGT	54	104	51	50	1	0	98
CDR2-IMGT	105	128	24	20	4	0	83.3
FR3-IMGT	129	242	114	102	12	0	89.5
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	232	18	0	92.8


Alignments

                                        <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13969    1    GGTCCCTGAGACTCTCCTGTGCAGCCTCTGGATTCACCTTCAGTAGTTATGCTATGCACTGGGTCCGCCAGGCTCCAGGCAAGGGACTGG  90
V  92.8% (232/250)  IGHV3-30-3*01  47   ..............................................C......................................G....  136
                                           S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  A  M  H  W  V  R  Q  A  P  G  K  G  L  

                                        -------------><-------CDR2-IMGT------><---------------------------------------------------
                                        E  W  V  A  V  I  S  Y  D  E  N  Y  K  Y  Y  T  D  S  L  K  G  R  F  T  I  S  R  D  N  S  
                    Query_13969    91   AGTGGGTGGCAGTTATCTCATATGATGAAAACTATAAATATTACACGGACTCCCTGAAGGGCCGATTCACCATCTCCAGAGACAATTCCA  180
V  92.8% (232/250)  IGHV3-30-3*01  137  ................A..........G..G.A.......C...G.A......G....................................  226
                                        E  W  V  A  V  I  S  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                        -FR3-IMGT----------------------------------------------------><-----------------CDR3-IMGT-
                                        R  N  T  L  Y  L  Q  M  N  T  L  T  L  D  D  T  A  V  Y  Y  C  A  R  D  P  W  V  R  G  Y  
                    Query_13969    181  GGAACACCCTGTATCTGCAGATGAACACCCTGACACTTGACGACACGGCTGTGTATTACTGTGCGAGAGATCCTTGGGTTAGGGGTTATA  270
V  92.8% (232/250)  IGHV3-30-3*01  227  A......G...........A.......G.....G.GC...G.............................--------------------  296
                                        K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  90.0% (9/10)     IGHD3-22*01    16   -------------------------------------------------------------------------------...T......-  25

                                        ---------------->                                  
                                        K  G  F  F  D  Y  W  G  Q  G  S  L  V  I  V  S  S  
                    Query_13969    271  AGGGTTTCTTTGACTACTGGGGCCAGGGAAGTCTGGTCATTGTCTCCTCAG  321
J  90.9% (40/44)    IGHJ4*02       5    -------.......................CC.......CC..........  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33683529


Query= Query_64416

Length=357
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV3-33*01                                                                                           360     1e-101
IGHD3-3*01                                                                                            33.4    1e-05 
IGHJ4*02                                                                                              75.7    6e-18 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV3-33*01	IGHD3-3*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
AGAGA	TCCCCATCTTGGCGG	TTACGCTTTTTGGCGTGGTTATT	CCC	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGATCCCCATCTTGGCGGTTACGCTTTTTGGCGTGGTTATTCCCTTGACTAC	ARDPHLGGYAFWRGYSLDY	243	299	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	29	29	28	1	0	96.6
CDR1-IMGT	30	53	24	22	2	0	91.7
FR2-IMGT	54	104	51	49	2	0	96.1
CDR2-IMGT	105	128	24	24	0	0	100
FR3-IMGT	129	242	114	109	5	0	95.6
CDR3-IMGT (germline)	243	250	8	8	0	0	100
Total	N/A	N/A	250	240	10	0	96


Alignments

                                      <---------FR1-IMGT----------><-------CDR1-IMGT------><--------------------FR2-IMGT--------
                                         S  L  R  L  S  C  T  A  S  G  F  T  F  S  K  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  
                    Query_13970  1    GGTCCCTGAGACTCTCCTGTACAGCGTCTGGATTCACCTTCAGTAAATATGGCATGCACTGGGTCCGCCAGGCCCCAGGCAAGGGGCTGG  90
V  96.0% (240/250)  IGHV3-33*01  47   ....................G........................GC..........................T................  136
                                         S  L  R  L  S  C  A  A  S  G  F  T  F  S  S  Y  G  M  H  W  V  R  Q  A  P  G  K  G  L  

                                      -------------><-------CDR2-IMGT------><---------------------------------------------------
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  H  A  D  S  V  K  G  R  F  T  V  S  R  D  N  S  
                    Query_13970  91   AGTGGGTGGCTGTTATATGGTATGATGGAAGTAATAAATACCATGCAGACTCCGTGAAGGGCCGATTCACCGTCTCCAGAGACAATTCCA  180
V  96.0% (240/250)  IGHV3-33*01  137  ..........A..............................T.............................A..................  226
                                      E  W  V  A  V  I  W  Y  D  G  S  N  K  Y  Y  A  D  S  V  K  G  R  F  T  I  S  R  D  N  S  

                                      -FR3-IMGT----------------------------------------------------><-----------------------CDR3
                                      K  K  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R  D  P  H  L  G  G  Y  
                    Query_13970  181  AGAAGACGTTGTATCTGCAAATGAACAGCCTGAGAGCCGAGGACACGGCTGTGTATTATTGTGCGAGAGATCCCCATCTTGGCGGTTACG  270
V  96.0% (240/250)  IGHV3-33*01  227  ....C...C.................................................C...........--------------------  296
                                      K  N  T  L  Y  L  Q  M  N  S  L  R  A  E  D  T  A  V  Y  Y  C  A  R                       
D  91.3% (21/23)    IGHD3-3*01   4    -------------------------------------------------------------------------------------.....  8

                                      -IMGT----------------------->                                  
                                      A  F  W  R  G  Y  S  L  D  Y  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13970  271  CTTTTTGGCGTGGTTATTCCCTTGACTACTGGGGCCAGGGAACCCTGGTTACCGTCTCCTCAG  333
D  91.3% (21/23)    IGHD3-3*01   9    A.......A.........---------------------------------------------  26
J  97.6% (41/42)    IGHJ4*02     7    ---------------------............................C.............  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 34845030


Query= Query_247525

Length=384
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           436     1e-124
IGHD5-18*01                                                                                           33.4    2e-05 
IGHJ4*02                                                                                              93.0    4e-23 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD5-18*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CGAGA	TCCTTACT	TGGATACAGCTATGGTT	N/A	ACTAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTAC	ARSLLGYSYGYYFDY	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	21	3	0	87.5
FR2-IMGT	95	145	51	51	0	0	100
CDR2-IMGT	146	169	24	24	0	0	100
FR3-IMGT	170	283	114	112	2	0	98.2
CDR3-IMGT (germline)	284	289	6	6	0	0	100
Total	N/A	N/A	289	284	5	0	98.3


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  T  L  T  N  Y
                    Query_13971  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACACCTTAACCAACTA  90
V  98.3% (284/289)  IGHV5-51*01  6    .............................................................................G...T....G...  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  T  Y  S  P
                    Query_13971  91   CTGGATCGGCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGGATGGGGATCATCTATCCTGGTGACTCTGATACCACATACAGCCC  180
V  98.3% (284/289)  IGHV5-51*01  96   ................................................................................G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13971  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCATCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  98.3% (284/289)  IGHV5-51*01  186  .............................C............................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  R  S  L  L  G  Y  S  Y  G  Y  Y  F  D  Y  W  G  Q  G  T  L  V  T  V  S  S
                    Query_13971  271  CATGTATTACTGTGCGAGATCCTTACTTGGATACAGCTATGGTTACTACTTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTC  360
V  98.3% (284/289)  IGHV5-51*01  276  ...................-----------------------------------------------------------------------  294
                                        M  Y  Y  C  A  R                                                                        
D  100.0% (17/17)   IGHD5-18*01  2    ---------------------------.................----------------------------------------------  18
J  100.0% (48/48)   IGHJ4*02     1    --------------------------------------------..............................................  46

                                        
                                        
                    Query_13971  361  AG  362
J  100.0% (48/48)   IGHJ4*02     47   ..  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 37695987


Query= Query_204053

Length=343
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-61*01                                                                                           296     2e-82
IGHD3-3*01                                                                                            10.3    120  
IGHJ5*02                                                                                              77.6    1e-18


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-61*01	IGHD3-3*01	IGHJ5*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GAGAG	TGGACACAG	TTTTT	AGTTTCCAC	TTCGA	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAGAGTGGACACAGTTTTTAGTTTCCACTTCGACCCC	ARVDTVFSFHFDP	246	284	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	4	29	26	22	4	0	84.6
CDR1-IMGT	30	59	30	25	5	0	83.3
FR2-IMGT	60	110	51	46	5	0	90.2
CDR2-IMGT	111	131	21	19	2	0	90.5
FR3-IMGT	132	245	114	100	14	0	87.7
CDR3-IMGT (germline)	246	252	7	7	0	0	100
Total	N/A	N/A	249	219	30	0	88


Alignments

                                      <--------FR1-IMGT--------><----------CDR1-IMGT---------><--------------------FR2-IMGT-----
                                         L  R  L  S  C  T  V  S  G  G  S  V  S  S  G  S  F  F  W  T  W  I  R  Q  P  P  G  K  G  
                    Query_13972  4    CCCTGAGACTCTCCTGCACTGTCTCTGGTGGCTCCGTCAGTAGCGGTAGTTTCTTTTGGACCTGGATCCGGCAGCCCCCAGGGAAGGGAC  93
V  88.0% (219/249)  IGHV4-61*01  50   .....TCC...A............................C..T.......A..AC....G.............................  139
                                         L  S  L  T  C  T  V  S  G  G  S  V  S  S  G  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  

                                      ----------------><-----CDR2-IMGT-----><---------------------------------------------------
                                      L  E  W  L  A  Y  I  S  Y  S  G  R  T  K  S  N  P  S  L  K  S  R  V  T  M  S  I  D  T  S  
                    Query_13972  94   TGGAATGGCTTGCCTATATCTCTTACAGTGGGAGAACCAAGTCTAATCCCTCTCTCAAGAGTCGAGTCACCATGTCAATAGACACGTCCA  183
V  88.0% (219/249)  IGHV4-61*01  140  ....G...A...GG.......A............C.....C.AC..C.....C....................A...G............  229
                                      L  E  W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  

                                      -FR3-IMGT----------------------------------------------------><--------------CDR3-IMGT----
                                      K  N  Q  F  S  L  R  L  T  S  V  T  A  A  D  T  A  V  Y  F  C  A  R  V  D  T  V  F  S  F  
                    Query_13972  184  AGAACCAATTCTCCCTGAGGCTGACTTCCGTGACCGCTGCGGACACGGCCGTTTATTTCTGTGCGAGAGTGGACACAGTTTTTAGTTTCC  273
V  88.0% (219/249)  IGHV4-61*01  230  .......G..........A.....GC..T.......................G....A...........---------------------  298
                                      K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  R                       
D  100.0% (5/5)     IGHD3-3*01   10   ------------------------------------------------------------------------------.....-------  14

                                      ---------->                                  
                                      H  F  D  P  W  G  Q  G  T  L  V  T  V  S  S  
                    Query_13972  274  ACTTCGACCCCTGGGGCCAGGGAACTCTGGTCACCGTCTCCTCAG  318
J  97.7% (42/43)    IGHJ5*02     9    --.......................C...................  51


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 33366756


Query= Query_26236

Length=361
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-30-4*01                                                                                         333     1e-93
IGHD3-10*01                                                                                           16.1    2.3  
IGHJ4*02                                                                                              69.9    3e-16


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-30-4*01	IGHD3-10*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
CAAAG	G	TCGGGGAG	ACGCGGTATCCCC	CTTTG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCCAAAGGTCGGGGAGACGCGGTATCCCCCTTTGAATAC	AKGRGDAVSPFEY	267	305	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	50	50	46	4	0	92
CDR1-IMGT	51	80	30	25	5	0	83.3
FR2-IMGT	81	131	51	48	3	0	94.1
CDR2-IMGT	132	152	21	18	3	0	85.7
FR3-IMGT	153	266	114	100	14	0	87.7
CDR3-IMGT (germline)	267	273	7	6	1	0	85.7
Total	N/A	N/A	273	243	30	0	89


Alignments

                                        <--------------------FR1-IMGT--------------------><----------CDR1-IMGT---------><---------
                                           G  L  V  K  P  S  E  T  L  S  L  T  C  T  V  S  G  D  S  V  N  S  G  T  Y  Y  W  S  W  
                    Query_13973    1    CAGGACTGGTGAAGCCCTCGGAGACCCTGTCCCTCACCTGTACTGTCTCTGGTGACTCCGTCAACAGTGGTACTTACTACTGGAGCTGGA  90
V  89.0% (243/273)  IGHV4-30-4*01  26   ................T..AC...................C.............G....A...G.......GA............T....  115
                                           G  L  V  K  P  S  Q  T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  G  D  Y  Y  W  S  W  

                                        -----------FR2-IMGT---------------------><-----CDR2-IMGT-----><---------------------------
                                        I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  S  Y  S  G  N  T  Y  Y  N  P  S  L  R  G  R  
                    Query_13973    91   TCCGGCAGCCCCCAGGGAAGGGACTGGAGTGGATTGGGTACATCTCTTACAGTGGGAATACCTACTACAACCCGTCCCTCAGGGGTCGAG  180
V  89.0% (243/273)  IGHV4-30-4*01  116  ....C.................C......................A...........GC......................A.A......  205
                                        I  R  Q  P  P  G  K  G  L  E  W  I  G  Y  I  Y  Y  S  G  S  T  Y  Y  N  P  S  L  K  S  R  

                                        -------------------------FR3-IMGT----------------------------------------------------><---
                                        G  A  M  S  L  D  T  S  E  N  R  V  S  L  T  V  N  S  V  T  A  A  D  T  A  V  Y  F  C  A  
                    Query_13973    181  GTGCCATGTCACTAGACACGTCCGAGAACCGGGTCTCCCTGACGGTGAACTCTGTGACTGCCGCAGACACGGCCGTATATTTCTGTGCCA  270
V  89.0% (243/273)  IGHV4-30-4*01  206  T.A....A...G...........A......A.T.........A.C...G...........................G....A........  295
                                        V  T  I  S  V  D  T  S  K  N  Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  

                                        -----------CDR3-IMGT-------------->                                
                                        K  G  R  G  D  A  V  S  P  F  E  Y  W  G  Q  G  A  L  V  T  V  S  S
                    Query_13973    271  AAGGTCGGGGAGACGCGGTATCCCCCTTTGAATACTGGGGCCAGGGAGCCCTGGTCACCGTCTCCTC  337
V  89.0% (243/273)  IGHV4-30-4*01  296  G..----------------------------------------------------------------  298
                                        R                                                                  
D  100.0% (8/8)     IGHD3-10*01    14   ----........-------------------------------------------------------  21
J  95.2% (40/42)    IGHJ4*02       5    -------------------------......C...............A...................  46


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 35267394


Query= Query_247524

Length=322
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV4-59*01                                                                                           329     3e-92
IGHD1-26*01                                                                                           10.3    113  
IGHJ4*02                                                                                              81.4    1e-19


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV4-59*01	IGHD1-26*01	IGHJ4*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
GTGCG	GGCGGAAGAA	GGGAG	A	TTGAC	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGGGCGGAAGAAGGGAGATTGACTAC	AGGRREIDY	238	264	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	27	27	27	0	0	100
CDR1-IMGT	28	51	24	21	3	0	87.5
FR2-IMGT	52	102	51	50	1	0	98
CDR2-IMGT	103	123	21	14	7	0	66.7
FR3-IMGT	124	237	114	110	4	0	96.5
CDR3-IMGT (germline)	238	240	3	3	0	0	100
Total	N/A	N/A	240	225	15	0	93.8


Alignments

                                      <--------FR1-IMGT---------><-------CDR1-IMGT------><--------------------FR2-IMGT----------
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  T  N  H  Y  W  N  W  I  R  Q  P  P  G  K  G  L  E 
                    Query_13974  1    ACCCTGTCCCTCACCTGCACTGTCTCTGGTGGCTCCATCACTAATCACTACTGGAACTGGATCCGGCAGCCCCCAGGGAAGGGACTGGAG  90
V  93.8% (225/240)  IGHV4-59*01  49   ........................................G..G.T.........G..................................  138
                                       T  L  S  L  T  C  T  V  S  G  G  S  I  S  S  Y  Y  W  S  W  I  R  Q  P  P  G  K  G  L  E 

                                      -----------><-----CDR2-IMGT-----><----------------------------------------------------FR3-
                                       W  I  G  Y  L  Y  Y  D  G  D  T  K  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 
                    Query_13974  91   TGGATTGGGTATCTTTATTACGATGGTGACACCAAGTACAACCCCTCCCTCAAGAGTCGAGTCACCATATCAGTTGACACGTCCAAGAAC  180
V  93.8% (225/240)  IGHV4-59*01  139  ............A.C......AG...GAG......C......................................A...............  228
                                       W  I  G  Y  I  Y  Y  S  G  S  T  N  Y  N  P  S  L  K  S  R  V  T  I  S  V  D  T  S  K  N 

                                      IMGT----------------------------------------------------><--------CDR3-IMGT-------->      
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A  G  G  R  R  E  I  D  Y  W  G 
                    Query_13974  181  CAGTTCTCCCTGAAGTTGAGCTCTGTGACCGCTGCGGACACGGCCGTCTATTACTGTGCGGGCGGAAGAAGGGAGATTGACTACTGGGGC  270
V  93.8% (225/240)  IGHV4-59*01  229  ...............C...............................G............------------------------------  288
                                       Q  F  S  L  K  L  S  S  V  T  A  A  D  T  A  V  Y  Y  C  A                               
D  100.0% (5/5)     IGHD1-26*01  9    ----------------------------------------------------------------------.....---------------  13
J  100.0% (42/42)   IGHJ4*02     7    ----------------------------------------------------------------------------..............  20

                                                                  
                                       Q  G  T  L  V  T  V  S  S  
                    Query_13974  271  CAGGGAACCCTGGTCACCGTCTCCTCAG  298
J  100.0% (42/42)   IGHJ4*02     21   ............................  48


Lambda      K        H
    1.10    0.333    0.549 

Gapped
Lambda      K        H
    1.08    0.280    0.540 

Effective search space used: 31149345


Query= Query_240315

Length=386
                                                                                                      Score     E
Sequences producing significant alignments:                                                          (Bits)  Value

IGHV5-51*01                                                                                           414     5e-118
IGHD3-10*01                                                                                           16.1    2.5   
IGHJ6*02                                                                                              89.1    6e-22 


Domain classification requested: imgt


V-(D)-J rearrangement summary for query sequence (Top V gene match, Top D gene match, Top J gene match, Chain type, stop codon, V-J frame, Productive, Strand).  Multiple equivalent top matches, if present, are separated by a comma.
IGHV5-51*01	IGHD3-10*01	IGHJ6*02	VH	No	In-frame	Yes	+

V-(D)-J junction details based on top germline gene matches (V end, V-D junction, D region, D-J junction, J start).  Note that possible overlapping nucleotides at VDJ junction (i.e, nucleotides that could be assigned to either rearranging gene) are indicated in parentheses (i.e., (TACT)) but are not included under the V, D, or J gene itself
TGCGA	AATTTGCTGA	TTCGGGGA	TTGAAAC	CTACG	

Sub-region sequence details (nucleotide sequence, translation, start, end)
CDR3	GCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGTC	AKFADSGIETYGMDV	284	328	

Alignment summary between query and top germline V gene hit (from, to, length, matches, mismatches, gaps, percent identity)
FR1-IMGT	1	70	70	70	0	0	100
CDR1-IMGT	71	94	24	22	2	0	91.7
FR2-IMGT	95	145	51	48	3	0	94.1
CDR2-IMGT	146	169	24	22	2	0	91.7
FR3-IMGT	170	283	114	110	4	0	96.5
CDR3-IMGT (germline)	284	287	4	4	0	0	100
Total	N/A	N/A	287	276	11	0	96.2


Alignments

                                      <------------------------------FR1-IMGT------------------------------><-------CDR1-IMGT---
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  I  S  F
                    Query_13975  1    GCAGCTGGTGCAGTCTGGAGCAGAGGTGAAAAAGCCCGGGGAGTCTCTGAAGATCTCCTGTAAGGGTTCTGGATACAGCTTTATCAGCTT  90
V  96.2% (276/287)  IGHV5-51*01  6    ...................................................................................C.....A  95
                                        Q  L  V  Q  S  G  A  E  V  K  K  P  G  E  S  L  K  I  S  C  K  G  S  G  Y  S  F  T  S  Y

                                      ---><--------------------FR2-IMGT---------------------><-------CDR2-IMGT------><----------
                                        W  I  A  W  V  R  Q  M  P  G  K  G  L  E  C  L  G  I  I  D  P  R  D  S  D  T  T  Y  S  P
                    Query_13975  91   CTGGATCGCCTGGGTGCGCCAGATGCCCGGGAAAGGCCTGGAGTGCTTGGGGATCATCGATCCTCGTGACTCTGATACCACATACAGCCC  180
V  96.2% (276/287)  IGHV5-51*01  96   ........G....................................GA...........T.....G...............G.........  185
                                        W  I  G  W  V  R  Q  M  P  G  K  G  L  E  W  M  G  I  I  Y  P  G  D  S  D  T  R  Y  S  P

                                      ------------------------------------------FR3-IMGT----------------------------------------
                                        S  F  Q  G  Q  V  T  I  S  V  D  K  S  T  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A
                    Query_13975  181  GTCCTTCCAAGGCCAGGTCACCATCTCAGTCGACAAGTCCACCAGCACCGCCTACCTGCAGTGGAGCAGCCTGAAGGCCTCGGACACCGC  270
V  96.2% (276/287)  IGHV5-51*01  186  .............................C...........T................................................  275
                                        S  F  Q  G  Q  V  T  I  S  A  D  K  S  I  S  T  A  Y  L  Q  W  S  S  L  K  A  S  D  T  A

                                      ------------><-----------------CDR3-IMGT----------------->                                
                                        M  Y  Y  C  A  K  F  A  D  S  G  I  E  T  Y  G  M  D  V  W  G  Q  G  T  T  V  T  V  S  S
                    Query_13975  271  CATGTATTATTGTGCGAAATTTGCTGATTCGGGGATTGAAACCTACGGTATGGACGTCTGGGGCCAAGGGACCACGGTCACCGTCTCTTC  360
V  96.2% (276/287)  IGHV5-51*01  276  .........C.......-------------------------------------------------------------------------  292
                                        M  Y  Y  C  A                                                                           
D  100.0% (8/8)     IGHD3-10*01  13   ---------------------------........-------------------------------------------------------  20
J  98.0% (48/49)    IGHJ6*02     14   ------------------------------------------.............................................C..  61

                                       
                                       
                    Query_13975  361  A  361
